PeakID (cmd=annotatePeaks.pl Ezh2Cre_vs_Ezh2noCre_k27ac/Ezh2Cre_vs_Ezh2noCre_k27ac_MAnorm_result_nohead_for_homer.bed mm10) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type common_peak2_2451_27966_0.429705841617887_14.9862908056116_312.986007488573 chr11 97122002 97147584 + 312.986007488573 NA Intergenic Intergenic 11626 NR_106094 102466822 NR_106094 ENSMUSG00000099286 Mir7235 Gm27986|mmu-mir-7235 microRNA 7235 ncRNA common_peak2_1968_20434_0.494171375642598_14.5658403107293_309.337882291893 chr4 59249425 59269427 + 309.337882291893 NA promoter-TSS (NR_105031) promoter-TSS (NR_105031) -625 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_1105_8624_0.717938770124888_13.4332781265027_297.889814679354 chr12 73602166 73612461 + 297.889814679354 NA intron (NM_001313977, intron 2 of 14) intron (NM_001313977, intron 2 of 14) 22517 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak2_1752_17371_0.522824011851768_14.3458882433798_297.26970683088 chr1 91051371 91071243 + 297.26970683088 NA intron (NM_001310732, intron 1 of 24) intron (NM_001310732, intron 1 of 24) 7863 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_1555_14576_0.564936418521347_14.1138744270991_295.565250943643 chr15 86053085 86072664 + 295.565250943643 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 4147 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak2_1565_14758_0.55837182008872_14.1284932641144_291.671760431505 chr6 108655968 108669432 + 291.671760431505 NA intron (NM_011498, intron 4 of 4) intron (NM_011498, intron 4 of 4) -1766 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_605_3201_1.08283742842884_12.1861763067307_285.548147590576 chr14 25468847 25477394 + 285.548147590576 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 13935 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_1438_13094_0.581282419371613_13.9673696489238_282.690924386329 chr2 34956596 34966064 + 282.690924386329 NA intron (NM_009421, intron 1 of 10) intron (NM_009421, intron 1 of 10) 442 NM_009421 22029 Mm.239514 NM_009421 ENSMUSG00000026875 Traf1 4732496E14Rik TNF receptor-associated factor 1 protein-coding common_peak1_518_2503_1.16332620071321_11.8716819472892_265.115653440707 chr11 3141149 3145650 + 265.115653440707 NA intron (NM_030207, intron 19 of 32) intron (NM_030207, intron 19 of 32) 19378 NR_003517 236604 Mm.247625 NM_001004146 Pisd-ps1 - phosphatidylserine decarboxylase, pseudogene 1 pseudo common_peak2_1096_8794_0.675320515213947_13.4401281199663_264.817796287827 chr13 43241816 43255108 + 264.817796287827 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) 55710 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak2_1156_9567_0.648021609640915_13.5480124790186_262.767865868137 chr11 97816846 97831909 + 262.767865868137 NA intron (NM_010688, intron 3 of 6) intron (NM_010688, intron 3 of 6) -16403 NM_001080935 68127 Mm.110270 NM_001080935 ENSMUSG00000050538 B230217C12Rik AI840637 RIKEN cDNA B230217C12 gene protein-coding common_peak2_1329_11898_0.580065497615943_13.8285854619191_255.75867140041 chr2 127308759 127322111 + 255.75867140041 NA Intergenic Intergenic -20724 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak2_802_5411_0.823754315536943_12.813823281745_255.304864361216 chr12 25207231 25214909 + 255.304864361216 NA Intergenic MLTR73|LTR|ERV1 81896 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_1861_19532_0.460422809217736_14.4838373285053_253.728682020654 chr4 59251265 59267386 + 253.728682020654 NA promoter-TSS (NR_105031) promoter-TSS (NR_105031) -726 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_565_3007_1.05216554895148_12.0806716261534_250.754145141351 chr14 25470010 25477323 + 250.754145141351 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 14481 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_1585_15567_0.503840682527049_14.1782163360446_245.863012962644 chr11 86577404 86595378 + 245.863012962644 NA intron (NM_029478, intron 11 of 11) intron (NM_029478, intron 11 of 11) -2233 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_1195_10240_0.608621365344963_13.6263796588686_244.722139136435 chr17 33548747 33567528 + 244.722139136435 NA intron (NM_053214, intron 1 of 27) intron (NM_053214, intron 1 of 27) 2430 NM_053214 17916 Mm.42019 NM_053214 ENSMUSG00000024300 Myo1f C330006B10Rik myosin IF protein-coding common_peak2_1378_12699_0.55010184934388_13.9075918012188_242.965924497009 chr9 110640350 110658652 + 242.965924497009 NA intron (NM_183276, intron 1 of 53) intron (NM_183276, intron 1 of 53) 4660 NM_183276 235627 Mm.335481 NM_183276 ENSMUSG00000056724 Nbeal2 1110014F23Rik|BC042396|mKIAA0540 neurobeachin-like 2 protein-coding common_peak2_1183_10115_0.608493885479952_13.6085982644032_241.706722252605 chr1 87619555 87629891 + 241.706722252605 NA intron (NR_122078, intron 1 of 27) intron (NR_122078, intron 1 of 27) 4411 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_1703_17348_0.474566108054722_14.319847941532_240.606883866488 chr11 87745228 87755378 + 240.606883866488 NA Intergenic Intergenic -6561 NR_029555 387160 NR_029555 ENSMUSG00000105196 Mir142 Mirn142|miR-142|mir-142a|mmu-mir-142|mmu-mir-142a microRNA 142 ncRNA common_peak2_550_2950_1.03223529409771_12.0431058524809_235.057877594231 chr5 138341171 138345206 + 235.057877594231 NA Intergenic Intergenic 62679 NM_016964 50878 Mm.285609 NM_016964 ENSMUSG00000036928 Stag3 SA-2 stromal antigen 3 protein-coding common_peak1_550_2951_1.03174649346932_12.0433502527951_234.875260958494 chr5 138341163 138345215 + 234.875260958494 NA Intergenic Intergenic 62680 NM_016964 50878 Mm.285609 NM_016964 ENSMUSG00000036928 Stag3 SA-2 stromal antigen 3 protein-coding common_peak2_1515_14711_0.50555021784878_14.0974808733363_234.084619919957 chr4 59330226 59341105 + 234.084619919957 NA intron (NM_001163288, intron 12 of 16) B1_Mur4|SINE|Alu 75614 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_1508_14620_0.506311589062436_14.0889101615477_233.416930985428 chr3 88136801 88153361 + 233.416930985428 NA intron (NM_001310587, intron 1 of 11) intron (NM_001310587, intron 1 of 11) 2709 NM_001310593 17261 Mm.28184 NM_133665 ENSMUSG00000001419 Mef2d C80750 myocyte enhancer factor 2D protein-coding common_peak2_1377_12802_0.537164709897979_13.9127766367553_232.559781077478 chr3 87837984 87851548 + 232.559781077478 NA Intergenic L1M2|LINE|L1 -1989 NM_001025571 27371 Mm.86361 NM_021309 ENSMUSG00000028071 Sh2d2a Lad|Ribp|Tsad SH2 domain containing 2A protein-coding common_peak2_1448_13788_0.519035731987401_14.0107480796718_232.384590941217 chr1 40464358 40481380 + 232.384590941217 NA intron (NM_001161843, intron 3 of 9) intron (NM_001161843, intron 3 of 9) 6863 NM_008365 16182 Mm.253664 NM_008365 ENSMUSG00000026070 Il18r1 Il18ralpha|Il1rrp interleukin 18 receptor 1 protein-coding common_peak2_1310_11942_0.549277848451435_13.8185165810382_227.786201132456 chr17 84179233 84191113 + 227.786201132456 NA 3' UTR (NM_001001806, exon 2 of 2) 3' UTR (NM_001001806, exon 2 of 2) 2774 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_1478_14285_0.50421566726879_14.0544222396259_226.052862718882 chr1 138152590 138181574 + 226.052862718882 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 8044 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_743_4999_0.80294127489721_12.6891830169981_222.538068231507 chr18 75366459 75372089 + 222.538068231507 NA exon (NM_001042660, exon 1 of 4) exon (NM_001042660, exon 1 of 4) 1909 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_1089_9121_0.611325678736558_13.460797294226_220.179456388915 chr2 25140488 25157846 + 220.179456388915 NA Intergenic MTC|LTR|ERVL-MaLR -31591 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak2_755_5159_0.785812948167161_12.7260618243942_218.67729301709 chr18 75366150 75373048 + 218.67729301709 NA intron (NM_001042660, intron 1 of 3) intron (NM_001042660, intron 1 of 3) 2234 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_954_7470_0.665391446248279_13.199781369741_217.721560672455 chr19 46725663 46737832 + 217.721560672455 NA intron (NM_020577, intron 10 of 10) RMER19B|LTR|ERVK 24304 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak1_678_4341_0.844730462013734_12.506509241622_217.070280137031 chr8 126846915 126852334 + 217.070280137031 NA Intergenic AmnSINE1|SINE|Deu 96297 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak2_774_5409_0.761480499776768_12.7821531286026_213.486915330707 chr5 124073966 124085095 + 213.486915330707 NA intron (NM_019875, intron 6 of 11) intron (NM_019875, intron 6 of 11) 16268 NM_019875 56325 Mm.254839 NM_019875 ENSMUSG00000029408 Abcb9 TAPL|mKIAA1520 ATP-binding cassette, sub-family B (MDR/TAP), member 9 protein-coding common_peak2_1599_16188_0.46296280707249_14.2142076557183_212.856501260311 chr4 130910152 130927477 + 212.856501260311 NA intron (NM_010686, intron 1 of 7) intron (NM_010686, intron 1 of 7) 5480 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding common_peak2_676_4360_0.833211053648558_12.5070488019059_211.295772182365 chr3 31092959 31097090 + 211.295772182365 NA promoter-TSS (NM_011386) promoter-TSS (NM_011386) -34 NM_011386 20482 Mm.15406 NM_011386 ENSMUSG00000027660 Skil Skir|SnoN|sno SKI-like protein-coding common_peak2_1552_15577_0.465705062105364_14.1600749337773_207.484206601909 chr12 104054446 104068760 + 207.484206601909 NA Intergenic RMER17C2|LTR|ERVK -16356 NR_002861 321018 Mm.297023 NR_002861 Serpina4-ps1 KALps|Klst serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1 pseudo common_peak2_832_6134_0.707760850954847_12.9367280540277_205.298056153004 chr13 113598457 113612112 + 205.298056153004 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 13280 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak2_1186_10532_0.554694608019917_13.6399760856119_205.252309884195 chr1 161763456 161781993 + 205.252309884195 NA Intergenic Intergenic 15771 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_1093_9330_0.585126305704604_13.4803791399989_204.509746656572 chr14 75175788 75189432 + 204.509746656572 NA intron (NM_008879, intron 2 of 16) intron (NM_008879, intron 2 of 16) 46185 NM_008879 18826 Mm.153911 NM_008879 ENSMUSG00000021998 Lcp1 AW536232|D14Ertd310e|LCP-1|Pls2|pp65 lymphocyte cytosolic protein 1 protein-coding common_peak2_1118_9678_0.572284254395637_13.5267844129171_201.998668179287 chr13 80882105 80887385 + 201.998668179287 NA intron (NM_001042591, intron 1 of 7) intron (NM_001042591, intron 1 of 7) 1323 NM_001042591 105171 Mm.423137 NM_001042591 ENSMUSG00000074794 Arrdc3 AI450344|mKIAA1376 arrestin domain containing 3 protein-coding common_peak2_1009_8293_0.61371375976417_13.324709211788_201.952440834339 chr11 69407946 69412951 + 201.952440834339 NA intron (NM_001017426, intron 1 of 22) CpG 3227 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak1_1114_9647_0.570575268932638_13.5213018263664_200.041559799928 chr13 80882404 80887356 + 200.041559799928 NA intron (NM_001042591, intron 1 of 7) intron (NM_001042591, intron 1 of 7) 1458 NM_001042591 105171 Mm.423137 NM_001042591 ENSMUSG00000074794 Arrdc3 AI450344|mKIAA1376 arrestin domain containing 3 protein-coding common_peak2_1049_8825_0.592754096765505_13.4039210803587_199.08707401352 chr11 120344957 120355217 + 199.08707401352 NA intron (NR_038126, intron 1 of 1) CpG 1409 NR_038126 66838 Mm.375010 NR_038126 ENSMUSG00000043644 0610009L18Rik - RIKEN cDNA 0610009L18 gene ncRNA common_peak2_1523_15306_0.457665894625299_14.1307368853874_196.349259120762 chr11 98456373 98482640 + 196.349259120762 NA intron (NM_011771, intron 7 of 7) intron (NM_011771, intron 7 of 7) 22672 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak1_658_4287_0.809877679361648_12.4710280301386_194.695280250486 chr3 31093169 31096550 + 194.695280250486 NA promoter-TSS (NM_011386) promoter-TSS (NM_011386) -199 NM_011386 20482 Mm.15406 NM_011386 ENSMUSG00000027660 Skil Skir|SnoN|sno SKI-like protein-coding common_peak2_1238_11354_0.522156944866328_13.7321185580274_193.928878532975 chr7 66173622 66190546 + 193.928878532975 NA Intergenic Intergenic 72569 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_1168_10429_0.541831177546301_13.6193671261803_193.105580933699 chr18 34853322 34862469 + 193.105580933699 NA Intergenic Intergenic -3312 NM_007913 13653 Mm.181959 NM_007913 ENSMUSG00000038418 Egr1 A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr early growth response 1 protein-coding common_peak2_853_6489_0.670665108612296_12.9993353171926_192.558694312397 chr11 11713643 11731403 + 192.558694312397 NA intron (NM_001301866, intron 3 of 5) L2c|LINE|L2 32346 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_897_7020_0.646111152659103_13.1005163889993_191.640978308164 chr4 135071888 135082791 + 191.640978308164 NA Intergenic Intergenic -43306 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_1284_12020_0.50443794088304_13.8054882655935_190.456342918622 chr18 80606209 80614367 + 190.456342918622 NA intron (NM_198429, intron 9 of 9) intron (NM_198429, intron 9 of 9) -65742 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_439_2182_1.06903153695419_11.6266121834679_189.042530857828 chrY 90768954 90774273 + 189.042530857828 NA Intergenic CpG -13829 NM_133362 170942 Mm.76062 NM_133362 ENSMUSG00000096768 Erdr1 edr erythroid differentiation regulator 1 protein-coding common_peak2_1005_8373_0.592842548371708_13.3281224769262_188.966899326247 chr5 113632553 113644900 + 188.966899326247 NA intron (NM_008153, intron 1 of 2) B4A|SINE|B4 11664 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak2_1196_10849_0.526761922749724_13.6687883835941_188.929337808605 chr9 32694767 32714641 + 188.929337808605 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 8662 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_1449_14349_0.462723683005152_14.040124957953_188.512811578424 chr11 97100880 97121284 + 188.512811578424 NA intron (NM_019507, intron 1 of 5) RSINE1|SINE|B4 4249 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding common_peak2_1343_12873_0.484975757406922_13.8946606322132_187.248193759115 chr11 74828232 74840082 + 187.248193759115 NA intron (NM_010813, intron 1 of 5) intron (NM_010813, intron 1 of 5) 3233 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak2_845_6459_0.660693981337653_12.9876654402501_185.346520555711 chr11 74564352 74577415 + 185.346520555711 NA intron (NM_001015046, intron 1 of 24) intron (NM_001015046, intron 1 of 24) 19275 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_944_7655_0.611474148497361_13.2081121887347_184.98252971501 chr9 66274421 66283502 + 184.98252971501 NA Intergenic Intergenic -71489 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak2_786_5777_0.693729604101671_12.8432192906155_184.93599015499 chr7 128128182 128139356 + 184.93599015499 NA exon (NM_021334, exon 8 of 30) exon (NM_021334, exon 8 of 30) 4201 NM_021334 16411 Mm.22378 NM_021334 ENSMUSG00000030789 Itgax AI449405|Cd11c|Cr4|N418 integrin alpha X protein-coding common_peak2_1475_14780_0.451480662711367_14.077196588389_184.150685221644 chr4 59188300 59208963 + 184.150685221644 NA intron (NM_011673, intron 1 of 8) intron (NM_011673, intron 1 of 8) 9081 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak2_1422_14031_0.461791428573683_14.0073287467316_183.590643307719 chr15 77829081 77843026 + 183.590643307719 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 6122 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_1265_11901_0.49242976401449_13.7851312844714_178.959020002625 chr19 5840340 5850556 + 178.959020002625 NA promoter-TSS (NR_131212) promoter-TSS (NR_131212) 30 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak2_1274_12036_0.488693699538153_13.799535101115_178.015239214546 chr9 35115308 35126902 + 178.015239214546 NA intron (NR_029475, intron 2 of 5) MER2|DNA|TcMar-Tigger -4295 NM_009178 20443 Mm.275973 NM_009178 ENSMUSG00000032038 St3gal4 Siat4c ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding common_peak1_1261_11875_0.489984696798086_13.7807537263857_176.64507998558 chr18 80606887 80613904 + 176.64507998558 NA intron (NM_198429, intron 9 of 9) B4A|SINE|B4 -65849 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_1145_10328_0.520705367035363_13.5947656498088_175.401183195713 chr17 84181071 84190041 + 175.401183195713 NA 3' UTR (NM_001001806, exon 2 of 2) 3' UTR (NM_001001806, exon 2 of 2) 2391 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_1367_13366_0.462082076770184_13.9374291308774_175.092857035404 chr4 140943372 140955229 + 175.092857035404 NA exon (NM_008812, exon 15 of 16) exon (NM_008812, exon 15 of 16) 8602 NR_045911 100126227 Mm.404073 NR_045911 ENSMUSG00000087698 Gm13031 OTTMUSG00000010081 predicted gene 13031 ncRNA common_peak1_426_2148_1.03860579288466_11.5887526638701_173.896514893785 chrY 90769126 90774058 + 173.896514893785 NA Intergenic CpG -13850 NM_133362 170942 Mm.76062 NM_133362 ENSMUSG00000096768 Erdr1 edr erythroid differentiation regulator 1 protein-coding common_peak2_1384_13625_0.456251144497804_13.9622000636769_173.655724480602 chr4 133619262 133634340 + 173.655724480602 NA intron (NM_001017968, intron 2 of 7) B1_Mur2|SINE|Alu 6628 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak2_1186_10898_0.505415238485186_13.6646157703792_173.386676429516 chr4 139195550 139215262 + 173.386676429516 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 11295 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_1358_13264_0.461452362176059_13.9260632362041_173.280112484525 chr10 96366828 96379929 + 173.280112484525 NA Intergenic Intergenic 147171 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_954_7907_0.583379937135907_13.2407871242972_172.253110576832 chr17 70846701 70854530 + 172.253110576832 NA promoter-TSS (NM_001164076) promoter-TSS (NM_001164076) 595 NM_009372 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_1183_10879_0.503454271005488_13.6611180716404_171.696257191726 chr13 113084754 113103386 + 171.696257191726 NA intron (NM_010370, intron 4 of 4) intron (NM_010370, intron 4 of 4) 6911 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak2_996_8447_0.564246731433679_13.3265174850753_170.977654445906 chr5 123135283 123146291 + 170.977654445906 NA Intergenic Intergenic -1406 NM_001040398 208043 Mm.250391 NM_177581 ENSMUSG00000038384 Setd1b AA516740|BC035291|KMT2G|mKIAA1076 SET domain containing 1B protein-coding common_peak2_491_2767_0.924174175954697_11.8967153156141_170.422581343545 chr15 57692761 57696855 + 170.422581343545 NA 5' UTR (NM_199449, exon 1 of 4) 5' UTR (NM_199449, exon 1 of 4) 141 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding common_peak1_612_4021_0.774221737742433_12.3608082351766_164.943066830874 chr1 182503108 182507686 + 164.943066830874 NA intron (NM_009794, intron 2 of 20) intron (NM_009794, intron 2 of 20) 12086 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_1026_8900_0.541352293986725_13.3904278591948_164.552505405094 chr6 50386696 50394186 + 164.552505405094 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -7604 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_1464_14904_0.426190495192639_14.0766040024749_164.102293560975 chr12 110493715 110507348 + 164.102293560975 NA intron (NM_012023, intron 1 of 13) intron (NM_012023, intron 1 of 13) 14792 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak2_938_7797_0.573689272749862_13.2157330757726_163.730933815483 chr11 67558263 67568081 + 163.730933815483 NA intron (NM_008088, intron 1 of 13) intron (NM_008088, intron 1 of 13) -23328 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_483_2738_0.910357916302781_11.8746125088568_162.819029935203 chr15 57693047 57696678 + 162.819029935203 NA 5' UTR (NM_199449, exon 1 of 4) 5' UTR (NM_199449, exon 1 of 4) 195 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding common_peak2_758_5651_0.661430983040704_12.7952612418543_162.593879873221 chr1 91090236 91097702 + 162.593879873221 NA intron (NM_001310732, intron 12 of 24) intron (NM_001310732, intron 12 of 24) 40525 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_1370_13630_0.437742897468324_13.9534752335757_158.947726068798 chr3 95657671 95676705 + 158.947726068798 NA Intergenic B1_Mus1|SINE|Alu 8467 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak2_616_4120_0.750650168689825_12.3841038326254_157.580946544736 chrX 169988926 169999916 + 157.580946544736 NA Intergenic Intergenic -15504 NR_029457 654820 Mm.34441 NM_001039559 ENSMUSG00000072844 G530011O06Rik - RIKEN cDNA G530011O06 gene ncRNA common_peak2_1159_10737_0.486168145389419_13.6335217622552_157.079163309113 chr11 32545946 32566822 + 157.079163309113 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 23118 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_385_1884_1.04906879547659_11.4048832058943_156.134508699232 chr5 75042362 75045543 + 156.134508699232 NA intron (NM_028850, intron 1 of 5) intron (NM_028850, intron 1 of 5) 689 NM_028850 74277 Mm.239814 NM_028850 ENSMUSG00000029229 Chic2 1700081B18Rik|4930502K01Rik|BTL cysteine-rich hydrophobic domain 2 protein-coding common_peak2_976_8359_0.543493683522657_13.3010340687296_155.932620222491 chr1 136130740 136142068 + 155.932620222491 NA intron (NM_001039472, intron 1 of 34) intron (NM_001039472, intron 1 of 34) 5003 NM_001039472 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding common_peak1_1146_10623_0.481622406219046_13.6158506344564_152.256220245487 chr2 127313027 127321491 + 152.256220245487 NA Intergenic Intergenic -18900 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak1_368_1761_1.06671408845158_11.3163552531462_151.924984300543 chr5 75043016 75045149 + 151.924984300543 NA intron (NM_028850, intron 1 of 5) CpG 559 NM_028850 74277 Mm.239814 NM_028850 ENSMUSG00000029229 Chic2 1700081B18Rik|4930502K01Rik|BTL cysteine-rich hydrophobic domain 2 protein-coding common_peak1_1287_12564_0.444710796150028_13.839478448843_151.571204261001 chr4 59331938 59340984 + 151.571204261001 NA intron (NM_001163288, intron 12 of 16) intron (NM_001163288, intron 12 of 16) 76410 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_290_1138_1.27592084780858_10.7915124556124_151.111339267164 chr7 25707797 25711066 + 151.111339267164 NA Intergenic URR1B|DNA|hAT-Charlie 9622 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak2_600_4003_0.745707307088342_12.3400799123802_150.846893198363 chr1 182503473 182507845 + 150.846893198363 NA intron (NM_009794, intron 2 of 20) intron (NM_009794, intron 2 of 20) 11824 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_832_6639_0.593640953270826_12.9937880028697_150.344419897386 chr15 77797855 77802963 + 150.344419897386 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 41766 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_1742_19311_0.359966533832079_14.4171932276711_148.241033975714 chr11 83524115 83545443 + 148.241033975714 NA Intergenic Intergenic -4261 NM_013653 20304 Mm.284248 NM_013653 ENSMUSG00000035042 Ccl5 MuRantes|RANTES|SISd|Scya5|TCP228 chemokine (C-C motif) ligand 5 protein-coding common_peak2_1182_11169_0.464008392424203_13.6793457615828_147.746561661913 chr10 127133154 127148172 + 147.746561661913 NA Intergenic B3|SINE|B2 -19503 NM_001171026 216440 Mm.295246 NM_177614 ENSMUSG00000040462 Os9 4632413K17Rik|AU022351 amplified in osteosarcoma protein-coding common_peak2_1521_15986_0.392634343236905_14.1609287900996_147.694326490605 chr4 63397127 63411367 + 147.694326490605 NA promoter-TSS (NM_001045514) promoter-TSS (NM_001045514) -802 NM_001045514 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak2_815_6488_0.590339571189745_12.958950236278_145.16250052829 chr7 66244937 66256411 + 145.16250052829 NA Intergenic Intergenic 131050 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_186_468_1.77347356158665_9.7601808933087_143.108661779813 chr6 114789202 114791231 + 143.108661779813 NA intron (NM_028835, intron 18 of 18) intron (NM_028835, intron 18 of 18) 131536 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_785_6152_0.600759811985505_12.8874541831938_143.050104043078 chr17 21531559 21538686 + 143.050104043078 NA promoter-TSS (NM_144515) promoter-TSS (NM_144515) -417 NM_144515 22710 Mm.296100 NM_144515 ENSMUSG00000051341 Zfp52 KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29 zinc finger protein 52 protein-coding common_peak1_1181_11219_0.456068388468784_13.6818192497305_142.987853786046 chr19 5842619 5850441 + 142.987853786046 NA Intergenic Intergenic -1050 NR_003513 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak2_1094_10052_0.479220657491606_13.5349488006714_142.585732613201 chr7 31147730 31157689 + 142.585732613201 NA Intergenic Intergenic -1659 NM_027898 52857 Mm.27366 NM_027898 ENSMUSG00000001248 Gramd1a 1300003M23Rik|AI415002|AW547240|D7Bwg0611e GRAM domain containing 1A protein-coding common_peak2_824_6632_0.578085310880137_12.9844884659775_141.665043197155 chr15 60096520 60107679 + 141.665043197155 NA Intergenic Intergenic -85481 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_724_5457_0.630717808995067_12.7295155837717_141.359105585517 chr1 91091294 91097503 + 141.359105585517 NA intron (NM_001310732, intron 12 of 24) intron (NM_001310732, intron 12 of 24) 40954 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_1258_12312_0.4336396557817_13.8047145174204_140.716095102518 chr8 106051404 106063868 + 140.716095102518 NA Intergenic Intergenic -1967 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding common_peak2_710_5303_0.637503063307298_12.6916165917662_140.652988527644 chr4 135096566 135105355 + 140.652988527644 NA Intergenic Intergenic -19685 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_1072_9787_0.481844561264847_13.4977206667118_140.456955543619 chr2 79253442 79271788 + 140.456955543619 NA intron (NM_010576, intron 2 of 27) intron (NM_010576, intron 2 of 27) 7189 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak2_656_4697_0.67275706068_12.5342095283522_140.449531813918 chr12 73708554 73718507 + 140.449531813918 NA intron (NM_001313977, intron 10 of 14) AT_rich|Low_complexity|Low_complexity 128734 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_757_5854_0.608190215685784_12.8195485632315_139.885772691771 chr8 120786953 120793855 + 139.885772691771 NA Intergenic Intergenic 51765 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_422_2324_0.908385118849829_11.6372075603077_137.597989726175 chr15 64030671 64037271 + 137.597989726175 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 26477 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_1279_12659_0.422818310433208_13.8393989395323_137.049824307219 chr3 88137201 88149098 + 137.049824307219 NA intron (NM_001310587, intron 1 of 11) intron (NM_001310587, intron 1 of 11) 777 NM_001310593 17261 Mm.28184 NM_133665 ENSMUSG00000001419 Mef2d C80750 myocyte enhancer factor 2D protein-coding common_peak2_189_505_1.69208852676726_9.82903783807794_136.683424388197 chr6 114789169 114791686 + 136.683424388197 NA intron (NM_028835, intron 18 of 18) intron (NM_028835, intron 18 of 18) 131325 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_1313_13165_0.412670887460067_13.8908649261485_135.317371457739 chr6 129224052 129238947 + 135.317371457739 NA Intergenic Intergenic 6546 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak2_973_8562_0.503438079265644_13.3156196497617_135.191969285638 chr14 60702038 60716710 + 135.191969285638 NA intron (NM_001033272, intron 3 of 12) intron (NM_001033272, intron 3 of 12) -23530 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak2_1053_9608_0.47685617501925_13.4685986710055_134.848295846452 chr11 98936397 98946530 + 134.848295846452 NA intron (NM_001177303, intron 1 of 8) intron (NM_001177303, intron 1 of 8) 1752 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak2_605_4201_0.690734574272051_12.3822277338091_133.248025490463 chr18 32396378 32401575 + 133.248025490463 NA intron (NM_001083334, intron 1 of 14) intron (NM_001083334, intron 1 of 14) -20692 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA common_peak2_1158_11042_0.444235100958901_13.6529620855847_132.975224163749 chr4 145238522 145247538 + 132.975224163749 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 3840 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_898_7640_0.525995755871781_13.1625436229312_132.685205883204 chr7 66192362 66202558 + 132.685205883204 NA Intergenic Intergenic 87945 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_1086_10091_0.46065839332462_13.5312536876386_131.410460770303 chr7 142368471 142388832 + 131.410460770303 NA intron (NM_009983, intron 5 of 8) intron (NM_009983, intron 5 of 8) -6392 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak2_1175_11299_0.436812534433122_13.6824414194065_131.24013940164 chr8 69932080 69942518 + 131.24013940164 NA intron (NM_001286450, intron 2 of 12) intron (NM_001286450, intron 2 of 12) -34741 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak2_927_8027_0.510899969081732_13.2262748859035_130.840372948856 chr10 75314116 75322220 + 130.840372948856 NA intron (NM_009630, intron 1 of 2) intron (NM_009630, intron 1 of 2) 1291 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak2_450_2633_0.841785047936762_11.7839321542249_130.822504002282 chr2 128376299 128383270 + 130.822504002282 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 49567 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_283_1176_1.18548556318128_10.7936413866291_130.699721595689 chr14 25478985 25482602 + 130.699721595689 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 21608 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_1154_11023_0.440601471100379_13.6486609082545_130.400193757614 chr4 145238684 145247434 + 130.400193757614 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 3811 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_1099_10283_0.454507332803292_13.5553675612353_130.082592353978 chr17 84113611 84121780 + 130.082592353978 NA Intergenic Intergenic 39035 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_987_8818_0.486194380539292_13.3494965505748_129.074940402633 chr7 106232550 106240376 + 129.074940402633 NA Intergenic Intergenic -21123 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak2_631_4523_0.658552810682565_12.4726596193311_128.993242982492 chr2 166605179 166613869 + 128.993242982492 NA intron (NM_177782, intron 10 of 39) intron (NM_177782, intron 10 of 39) -63194 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_782_6264_0.567968068763198_12.8970828285908_128.723455787493 chr4 135075195 135082887 + 128.723455787493 NA Intergenic Intergenic -41604 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_948_8323_0.498262691725126_13.2721925955979_128.522374732638 chr5 115514227 115531424 + 128.522374732638 NA intron (NM_011223, intron 1 of 10) PB1|SINE|Alu 16149 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak2_988_8855_0.481944449186162_13.3534117313746_127.221665945099 chr1 134058404 134067544 + 127.221665945099 NA Intergenic Intergenic 16181 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_1093_10261_0.447917982659764_13.5489833015213_125.805248375738 chr17 84113646 84121546 + 125.805248375738 NA Intergenic B1_Mur1|SINE|Alu 38936 NR_045458 74473 Mm.399575 NR_045458 4933433H22Rik - RIKEN cDNA 4933433H22 gene ncRNA common_peak2_1004_9085_0.473354213124585_13.386106696619_125.484985045538 chr5 21244063 21258269 + 125.484985045538 NA intron (NM_175437, intron 16 of 30) intron (NM_175437, intron 16 of 30) 64899 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_807_6603_0.547560722251268_12.9629047660389_125.228443126928 chr11 69409591 69412842 + 125.228443126928 NA intron (NM_001017426, intron 1 of 22) CpG 2459 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak1_958_8504_0.485778145249583_13.2969845931755_124.280125207193 chr8 120758617 120763825 + 124.280125207193 NA Intergenic Intergenic 22582 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_856_7221_0.522690763202004_13.0795280865496_123.7289329144 chr17 31070076 31080063 + 123.7289329144 NA intron (NM_009593, intron 2 of 14) MLTR14|LTR|ERV1 17375 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak2_559_3794_0.698010788966132_12.2388895647859_123.319859645694 chr19 53430988 53435953 + 123.319859645694 NA Intergenic Intergenic 31326 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak2_908_7882_0.500588166713255_13.1948231425554_122.965904837689 chr15 73146417 73159574 + 122.965904837689 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 31952 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak2_303_1380_1.07531584388427_10.9691555262002_121.439665104373 chr5 53588258 53591627 + 121.439665104373 NA promoter-TSS (NM_001080927) promoter-TSS (NM_001080927) -404 NM_009035 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak1_675_5098_0.605039848273561_12.6185185467653_120.517462018796 chr2 29627570 29634265 + 120.517462018796 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 11197 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_303_1385_1.0701019060051_10.9717624951398_120.484588202714 chr5 53588202 53591631 + 120.484588202714 NA promoter-TSS (NM_001080927) promoter-TSS (NM_001080927) -430 NM_009035 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak2_1214_12002_0.407474771957727_13.7548448000456_120.077306269174 chr15 78509055 78524180 + 120.077306269174 NA Intergenic RMER5|LTR|ERV1 13034 NM_001204153 72709 Mm.34776 NM_028331 ENSMUSG00000022440 C1qtnf6 2810036M19Rik|CTRP6 C1q and tumor necrosis factor related protein 6 protein-coding common_peak2_1262_12684_0.396311861054004_13.8289918294783_119.584380942591 chr7 43432648 43444757 + 119.584380942591 NA TTS (NM_024253) TTS (NM_024253) 1564 NM_024253 72310 Mm.34613 NM_024253 ENSMUSG00000004612 Nkg7 2500004F03Rik natural killer cell group 7 sequence protein-coding common_peak1_260_1054_1.19390506322459_10.6399798152068_119.280538397193 chr14 25479626 25482199 + 119.280538397193 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 21727 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_704_5452_0.582536750338349_12.7041028152884_118.543224928951 chr15 27666813 27677252 + 118.543224928951 NA intron (NM_001242424, intron 1 of 8) intron (NM_001242424, intron 1 of 8) 9510 NM_001242424 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak2_1149_11129_0.419118316807182_13.6517251306329_118.298121923208 chr7 132796538 132814487 + 118.298121923208 NA intron (NM_212473, intron 1 of 4) intron (NM_212473, intron 1 of 4) 7684 NM_212473 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_662_4974_0.606194881883916_12.5835782512603_118.055076873301 chr12 25207592 25212393 + 118.055076873301 NA Intergenic Intergenic 80818 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_462_2847_0.775561160255174_11.863514011094_117.322553490595 chr17 4626065 4626850 + 117.322553490595 NA Intergenic (CATTC)n|Satellite|Satellite -8523 NR_130984 75117 Mm.429393 NR_130984 4930517M08Rik - RIKEN cDNA 4930517M08 gene ncRNA common_peak2_645_4793_0.613694563528542_12.5338614754134_116.941468478986 chr12 102360264 102372419 + 116.941468478986 NA intron (NM_001161365, intron 5 of 9) intron (NM_001161365, intron 5 of 9) 73356 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding common_peak2_420_2448_0.825036185288042_11.670495151208_116.238080198457 chr13 73770829 73776589 + 116.238080198457 NA intron (NM_011390, intron 1 of 23) intron (NM_011390, intron 1 of 23) 10012 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak2_1415_14963_0.360289604203349_14.0493530526525_115.160528421182 chr7 16397116 16409033 + 115.160528421182 NA intron (NM_198631, intron 1 of 13) intron (NM_198631, intron 1 of 13) 1878 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak2_398_2249_0.852325542711244_11.56187205746_115.007554080194 chr4 155217528 155224172 + 115.007554080194 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 1685 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_1099_10499_0.424519520196101_13.5703614675389_114.706912480755 chr7 63935444 63940806 + 114.706912480755 NA exon (NM_021366, exon 1 of 2) exon (NM_021366, exon 1 of 2) 790 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak1_584_4145_0.647679151530049_12.3413439768744_113.942073861794 chr18 32396593 32401217 + 113.942073861794 NA intron (NM_001083334, intron 1 of 14) intron (NM_001083334, intron 1 of 14) -20621 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA common_peak2_634_4699_0.611871239600003_12.5043806612524_113.900453409106 chr7 90351055 90357879 + 113.900453409106 NA intron (NM_001289583, intron 2 of 19) intron (NM_001289583, intron 2 of 19) -32514 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_712_5596_0.564900958052421_12.7328885114219_113.748775900195 chr2 167938439 167947848 + 113.748775900195 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 10816 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_896_7852_0.482572053558373_13.1803142085424_113.113626330396 chr10 62500379 62509548 + 113.113626330396 NA intron (NM_011157, intron 1 of 2) B1_Mur4|SINE|Alu 2792 NM_011157 19073 Mm.338790 NM_011157 ENSMUSG00000020077 Srgn Prg|Prg1|Sgc serglycin protein-coding common_peak2_950_8546_0.463847067367126_13.2931259407286_113.02401991988 chr6 97209583 97225107 + 113.02401991988 NA intron (NM_022992, intron 1 of 2) intron (NM_022992, intron 1 of 2) 6553 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak2_632_4686_0.610284775813222_12.4995914673856_112.916852490247 chr11 93994244 93998461 + 112.916852490247 NA exon (NM_027569, exon 1 of 29) exon (NM_027569, exon 1 of 29) 261 NM_027569 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding common_peak2_1069_10129_0.427341763731949_13.5200174355545_112.256669354667 chr9 123923062 123934277 + 112.256669354667 NA Intergenic ORR1F|LTR|ERVL-MaLR 40023 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding common_peak2_1039_9735_0.434250312364592_13.466238608896_111.6761302903 chr4 125121793 125128679 + 111.6761302903 NA intron (NM_153159, intron 2 of 5) intron (NM_153159, intron 2 of 5) 2645 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak2_1076_10246_0.422313640132781_13.5340707953344_110.743565832997 chr2 127331773 127340207 + 110.743565832997 NA promoter-TSS (NM_010090) promoter-TSS (NM_010090) -169 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak2_449_2773_0.763144463305705_11.8193243039765_110.228265001235 chr7 45068129 45076246 + 110.228265001235 NA intron (NM_001163684, intron 1 of 8) (CAAA)n|Simple_repeat|Simple_repeat 9758 NM_025533 66394 Mm.272139 NM_025533 ENSMUSG00000003421 Nosip 2310061K06Rik|CGI-25 nitric oxide synthase interacting protein protein-coding common_peak2_417_2464_0.802985996445825_11.6688649294882_109.992143176803 chr14 54120774 54126538 + 109.992143176803 NA Intergenic Intergenic 130273 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_700_5498_0.560348587772582_12.7051278651473_109.772886106713 chr8 25097812 25104271 + 109.772886106713 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 770 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_453_2818_0.755589295603665_11.8387624103723_109.48530715328 chr17 4626085 4626751 + 109.48530715328 NA Intergenic (CATTC)n|Satellite|Satellite -8562 NR_130984 75117 Mm.429393 NR_130984 4930517M08Rik - RIKEN cDNA 4930517M08 gene ncRNA common_peak2_1106_10673_0.41203351753696_13.5878300547568_109.384955034335 chr5 23429602 23436895 + 109.384955034335 NA non-coding (NR_040469, exon 1 of 1) non-coding (NR_040469, exon 1 of 1) 1105 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak2_790_6578_0.515403010043121_12.9413541024163_109.383113668815 chr8 120735349 120744949 + 109.383113668815 NA intron (NM_008320, intron 2 of 8) intron (NM_008320, intron 2 of 8) 1510 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_882_7726_0.478070141627063_13.1547277534289_109.118935155862 chr4 46563418 46583099 + 109.118935155862 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) -6818 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak2_1275_13046_0.373838855827906_13.8583499220992_108.621769315967 chr10 13963371 13972054 + 108.621769315967 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 1333 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak2_494_3244_0.705557287805982_12.0167814067895_108.047892289634 chr11 3125171 3128919 + 108.047892289634 NA intron (NR_003517, intron 2 of 6) intron (NR_003517, intron 2 of 6) 3024 NR_003517 236604 Mm.247625 NM_001004146 Pisd-ps1 - phosphatidylserine decarboxylase, pseudogene 1 pseudo common_peak2_1072_10234_0.417419465433463_13.5299332146275_107.863324724084 chr11 32531445 32545199 + 107.863324724084 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 5056 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_618_4579_0.604023988817501_12.4631438773931_107.838165500699 chr11 93994424 93997608 + 107.838165500699 NA promoter-TSS (NM_027569) promoter-TSS (NM_027569) -75 NM_001199203 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding common_peak2_960_8747_0.448822886040777_13.3191489480685_107.747510508095 chr10 80673847 80685237 + 107.747510508095 NA Intergenic Intergenic -3249 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak2_560_3950_0.643050059277638_12.2695271606165_106.915789386516 chr5 74401391 74406362 + 106.915789386516 NA intron (NM_001286437, intron 4 of 7) B3A|SINE|B2 127866 NM_178672 212986 Mm.134147 NM_178672 ENSMUSG00000062110 Scfd2 E430013M20Rik|STXBP1L1 Sec1 family domain containing 2 protein-coding common_peak1_486_3173_0.708639965372999_11.9864063955217_106.702431473707 chr11 3125609 3128847 + 106.702431473707 NA intron (NR_003517, intron 2 of 6) intron (NR_003517, intron 2 of 6) 3207 NR_003517 236604 Mm.247625 NM_001004146 Pisd-ps1 - phosphatidylserine decarboxylase, pseudogene 1 pseudo common_peak1_293_1379_1.01717051258479_10.9390378079579_106.456999799454 chr2 60123825 60126048 + 106.456999799454 NA intron (NM_001001182, intron 1 of 35) intron (NM_001001182, intron 1 of 35) 804 NM_001001182 407823 Mm.228071 NM_001001182 ENSMUSG00000026987 Baz2b 5830435C13Rik|BC053917|D2Ertd794e bromodomain adjacent to zinc finger domain, 2B protein-coding common_peak1_811_6874_0.498280047964004_12.9962840221687_106.200893605826 chr4 134115903 134123372 + 106.200893605826 NA intron (NM_026257, intron 8 of 14) intron (NM_026257, intron 8 of 14) 9116 NM_080559 73723 Mm.22240 NM_080559 ENSMUSG00000028843 Sh3bgrl3 1110004L05Rik|AU022188 SH3 domain binding glutamic acid-rich protein-like 3 protein-coding common_peak2_806_6813_0.500207405625948_12.9843899349093_106.166320219476 chr19 46303202 46306674 + 106.166320219476 NA promoter-TSS (NM_019408) promoter-TSS (NM_019408) 201 NM_001177369 18034 Mm.102365 NM_019408 ENSMUSG00000025225 Nfkb2 NF-kappaB2|lyt|p49|p49/p100|p50B|p52 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100 protein-coding common_peak1_844_7288_0.484414250322404_13.0737123102465_105.884863644301 chr17 70848528 70853838 + 105.884863644301 NA promoter-TSS (NM_009372) promoter-TSS (NM_009372) 27 NM_009372 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak2_571_4083_0.629647818077338_12.3105910599165_105.491342800501 chr2 158716339 158721079 + 105.491342800501 NA intron (NM_153089, intron 2 of 10) B1_Mur1|SINE|Alu -49390 NM_027975 71878 Mm.85162 NM_027975 ENSMUSG00000027654 Fam83d 2310007D09Rik|BB104611 family with sequence similarity 83, member D protein-coding common_peak1_675_5256_0.561014451330244_12.640531245237_105.253828982442 chr13 43249127 43254757 + 105.253828982442 NA intron (NM_001033399, intron 1 of 1) ID_B1|SINE|B4 52230 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak1_557_3935_0.63904904288799_12.2620390267832_105.087496150333 chr5 74401370 74406172 + 105.087496150333 NA intron (NM_001286437, intron 4 of 7) MTE-int|LTR|ERVL-MaLR 127971 NM_178672 212986 Mm.134147 NM_178672 ENSMUSG00000062110 Scfd2 E430013M20Rik|STXBP1L1 Sec1 family domain containing 2 protein-coding common_peak2_761_6279_0.516408677734695_12.8747531826463_104.881662305741 chr4 141857650 141875514 + 104.881662305741 NA intron (NM_025994, intron 1 of 3) intron (NM_025994, intron 1 of 3) 8338 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak2_244_1001_1.1563150305938_10.5468243084921_104.835855793681 chr6 99521093 99523772 + 104.835855793681 NA Intergenic CpG -87087 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_243_995_1.1577421413516_10.5388730027439_104.543717799026 chr6 99521279 99523916 + 104.543717799026 NA Intergenic CpG -87252 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_877_7722_0.468768149157235_13.1493297306189_104.517704033967 chr9 7867395 7874933 + 104.517704033967 NA intron (NM_007464, intron 1 of 8) intron (NM_007464, intron 1 of 8) 2006 NM_007464 11796 Mm.2026 NM_007464 ENSMUSG00000032000 Birc3 AW107670|Api1|Api2|Birc2|C-IAP2|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF49|cIAP-1|cIAP-2|cIAP1|cIAP2 baculoviral IAP repeat-containing 3 protein-coding common_peak1_401_2358_0.797330824249899_11.6026251153644_103.611690015637 chr14 54121444 54126162 + 103.611690015637 NA Intergenic Intergenic 130126 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_476_3099_0.705958297588079_11.9510316489556_103.375823199039 chr12 73592189 73600232 + 103.375823199039 NA intron (NM_001313977, intron 2 of 14) intron (NM_001313977, intron 2 of 14) 11414 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak2_808_6881_0.490261729307001_12.9937430413905_102.640075147643 chr19 4213045 4223343 + 102.640075147643 NA intron (NM_001310038, intron 2 of 3) intron (NM_001310038, intron 2 of 3) 3805 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak1_947_8650_0.440807036314043_13.2990547114823_102.56210849164 chr7 106233406 106239736 + 102.56210849164 NA Intergenic RMER5|LTR|ERV1 -21231 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak2_920_8317_0.446304818407066_13.2451733788499_101.281945793085 chr7 83649899 83661731 + 101.281945793085 NA intron (NM_010551, intron 12 of 18) intron (NM_010551, intron 12 of 18) 23798 NM_023377 170460 Mm.357953 NM_023377 ENSMUSG00000046027 Stard5 2310058G22Rik|AI607880|D7Ertd152e StAR-related lipid transfer (START) domain containing 5 protein-coding common_peak2_850_7423_0.470459441797605_13.0932107160264_101.252045563479 chr11 103169789 103179769 + 101.252045563479 NA intron (NM_019679, intron 1 of 26) MIRb|SINE|MIR 3641 NM_019679 57778 Mm.138913 NM_019679 ENSMUSG00000055805 Fmnl1 8030453N10Rik|AI553564|Fmnl|Fnrl|Frls formin-like 1 protein-coding common_peak1_686_5431_0.542334646666724_12.6784350875781_100.986191658764 chr9 124422562 124426416 + 100.986191658764 NA non-coding (NR_102721, exon 2 of 2) non-coding (NR_102721, exon 2 of 2) 702 NR_015516 75135 Mm.476814 NR_015516 4930526I15Rik 1600027J15Rik RIKEN cDNA 4930526I15 gene ncRNA common_peak2_250_1069_1.10440239952549_10.6155962810513_100.406655871602 chr12 100881896 100884811 + 100.406655871602 NA intron (NM_001177673, intron 2 of 2) intron (NM_001177673, intron 2 of 2) 16171 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding common_peak1_492_3299_0.67414524797382_12.0253229331201_99.2744821232323 chr1 87636660 87641511 + 99.2744821232323 NA intron (NR_122078, intron 2 of 27) LTR86A1|LTR|ERVL 18773 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_796_6776_0.485997114946935_12.9694296135877_99.2281329584636 chr19 46303604 46306683 + 99.2281329584636 NA promoter-TSS (NM_019408) promoter-TSS (NM_019408) 406 NM_001177369 18034 Mm.102365 NM_019408 ENSMUSG00000025225 Nfkb2 NF-kappaB2|lyt|p49|p49/p100|p50B|p52 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100 protein-coding common_peak2_504_3427_0.661802386371276_12.0740525872981_98.9005566807744 chr1 87636057 87641909 + 98.9005566807744 NA intron (NR_122078, intron 2 of 27) intron (NR_122078, intron 2 of 27) 18671 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_973_9053_0.422999098146699_13.3558391403212_98.2318821858 chr17 29490657 29496508 + 98.2318821858 NA intron (NM_008842, intron 4 of 5) B1_Mus1|SINE|Alu 2537 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_348_1910_0.850988234286811_11.3256061801209_97.4192924985577 chr15 64032316 64036863 + 97.4192924985577 NA intron (NM_144846, intron 1 of 11) RMER1B|Other|Other 25859 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_690_5529_0.526812274055059_12.6964699021496_96.4630365399917 chr9 124422435 124426860 + 96.4630365399917 NA non-coding (NR_102721, exon 2 of 2) non-coding (NR_102721, exon 2 of 2) 860 NR_015516 75135 Mm.476814 NR_015516 4930526I15Rik 1600027J15Rik RIKEN cDNA 4930526I15 gene ncRNA common_peak2_1013_9621_0.40643959178683_13.4353408799756_95.8181997870308 chr9 90240793 90254096 + 95.8181997870308 NA intron (NM_194334, intron 2 of 12) intron (NM_194334, intron 2 of 12) 23325 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak2_288_1401_0.963997869557977_10.9352695687896_95.422146542981 chr2 60124056 60126364 + 95.422146542981 NA intron (NM_001001182, intron 1 of 35) intron (NM_001001182, intron 1 of 35) 530 NM_001001182 407823 Mm.228071 NM_001001182 ENSMUSG00000026987 Baz2b 5830435C13Rik|BC053917|D2Ertd794e bromodomain adjacent to zinc finger domain, 2B protein-coding common_peak2_757_6348_0.491330008488235_12.8779786668302_95.173091575918 chr14 25457111 25462572 + 95.173091575918 NA intron (NM_001310666, intron 1 of 23) CpG 656 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_1010_9592_0.405550989650511_13.4305418364717_95.1005876699078 chr3 87844299 87850123 + 95.1005876699078 NA intron (NM_001025571, intron 1 of 6) intron (NM_001025571, intron 1 of 6) 456 NM_021309 27371 Mm.86361 NM_021309 ENSMUSG00000028071 Sh2d2a Lad|Ribp|Tsad SH2 domain containing 2A protein-coding common_peak1_1027_9823_0.40073142615921_13.4624605584498_94.8979036492629 chr2 34959864 34964484 + 94.8979036492629 NA promoter-TSS (NM_009421) promoter-TSS (NM_009421) -402 NM_009421 22029 Mm.239514 NM_009421 ENSMUSG00000026875 Traf1 4732496E14Rik TNF receptor-associated factor 1 protein-coding common_peak1_756_6341_0.490585366719111_12.8760148454634_94.7870745778846 chr14 25457037 25462461 + 94.7870745778846 NA intron (NM_001310666, intron 1 of 23) CpG 564 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_1263_13133_0.347529595956637_13.8547835378804_93.6744196071587 chr8 123025024 123044110 + 93.6744196071587 NA intron (NR_037865, intron 1 of 13) B1_Mus1|SINE|Alu 7717 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_409_2514_0.739818478437211_11.6662519239115_93.2290417294349 chr8 107290458 107295017 + 93.2290417294349 NA promoter-TSS (NM_001286260) promoter-TSS (NM_001286260) -733 NM_018823 54446 Mm.390057 NM_018823 ENSMUSG00000003847 Nfat5 AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz nuclear factor of activated T cells 5 protein-coding common_peak1_1177_11922_0.362395036882543_13.7226571824965_92.9869027070836 chr8 124269900 124278463 + 92.9869027070836 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 42787 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_931_8581_0.422237997498176_13.2782171844975_92.765938668029 chr17 35422097 35427471 + 92.765938668029 NA promoter-TSS (NM_023124) promoter-TSS (NM_023124) -63 NM_023124 15019 Mm.486287 NM_023124 H2-Q8 H-2Q8|MMS10-T|Ms10t|Qa-2|Qa-8|Qa8 histocompatibility 2, Q region locus 8 protein-coding common_peak2_1263_13155_0.345115043023336_13.8559908143471_92.4587090606374 chr12 86882264 86897209 + 92.4587090606374 NA Intergenic MIRb|SINE|MIR -4922 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_680_5464_0.51807348258175_12.6750425218501_91.9439052179686 chr12 101005036 101011188 + 91.9439052179686 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 13656 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak2_674_5410_0.516739214613784_12.6600491332893_90.5657997993168 chr6 31215369 31222105 + 90.5657997993168 NA promoter-TSS (NR_110471) promoter-TSS (NR_110471) -263 NR_110469 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak2_455_2995_0.675513744650493_11.886578780784_90.5367207340686 chr1 153083320 153089415 + 90.5367207340686 NA exon (NM_175460, exon 5 of 11) exon (NM_175460, exon 5 of 11) 100080 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak2_650_5136_0.5276424718061_12.59053159425_89.9376564498565 chr9 90263762 90271367 + 89.9376564498565 NA intron (NM_194334, intron 1 of 12) intron (NM_194334, intron 1 of 12) 3205 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak2_570_4229_0.575876559093143_12.3343802275539_89.7267030860835 chr13 93892136 93901270 + 89.7267030860835 NA intron (NM_009712, intron 6 of 7) intron (NM_009712, intron 6 of 7) 105926 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak1_141_373_1.61287739714574_9.3533331584605_89.4951736079082 chr1 59763392 59764823 + 89.4951736079082 NA promoter-TSS (NM_007561) promoter-TSS (NM_007561) -172 NM_007561 12168 Mm.7106 NM_007561 ENSMUSG00000067336 Bmpr2 2610024H22Rik|AL117858|AW546137|BB189135|BMP-2|BMPR-2|BMPR-II|BMPRII|BRK-3|Gm20272 bone morphogenetic protein receptor, type II (serine/threonine kinase) protein-coding common_peak2_871_7858_0.431449132607261_13.1558546027851_89.0204920086575 chr15 78587292 78600117 + 89.0204920086575 NA Intergenic ORR1D1|LTR|ERVL-MaLR -3343 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak2_681_5513_0.507792377038323_12.6827797405294_88.8101253548313 chr19 47507186 47514118 + 88.8101253548313 NA intron (NM_175360, intron 7 of 9) intron (NM_175360, intron 7 of 9) -2330 NR_045322 100503104 Mm.442735 NR_045322 ENSMUSG00000097990 Gm19557 - predicted gene, 19557 ncRNA common_peak1_442_2881_0.680298026951188_11.8330036336503_88.4671881268051 chr13 117023460 117026122 + 88.4671881268051 NA intron (NM_001081009, intron 2 of 26) CpG 725 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding common_peak1_120_2023_-1.10642673005886_10.4297802096649_88.2818770417039 chr13 23530373 23531792 + 88.2818770417039 NA promoter-TSS (NM_153173) promoter-TSS (NM_153173) 38 NM_153173 69386 Mm.158272 NM_153173 ENSMUSG00000060981 Hist1h4h 1700024H08Rik histone cluster 1, H4h protein-coding common_peak1_809_7085_0.450304230939244_13.0159078655879_87.9996313508778 chr9 66276323 66282547 + 87.9996313508778 NA Intergenic RMER15|LTR|ERVL -71015 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak1_222_919_1.11299382301003_10.4019869624494_87.9713792936426 chr5 136565326 136568423 + 87.9713792936426 NA promoter-TSS (NM_001291239) promoter-TSS (NM_001291239) 616 NM_001291234 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak2_948_8878_0.405142455029278_13.3187527139458_87.8663992405125 chr10 77528300 77543395 + 87.8663992405125 NA intron (NM_008404, intron 1 of 15) B4|SINE|B4 5499 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding common_peak2_1480_16460_0.302157100944578_14.1578429116633_87.3922512158762 chr5 113822527 113835786 + 87.3922512158762 NA intron (NM_009151, intron 1 of 1) B1_Mus1|SINE|Alu 1345 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak2_213_856_1.14243133642963_10.3143670623273_87.2458129034862 chr5 115066540 115070607 + 87.2458129034862 NA intron (NM_029012, intron 2 of 10) B1_Mus2|SINE|Alu 39389 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt Gm13826|OTTMUSG00000014624 ribosomal protein L37, retrotransposed protein-coding common_peak2_448_2960_0.665090878964978_11.86441421466_86.4377695974795 chr13 117023067 117026416 + 86.4377695974795 NA intron (NM_001081009, intron 2 of 26) CpG 775 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding common_peak2_1210_12507_0.342183136832979_13.7816550723415_86.3698977605431 chr9 109049404 109060398 + 86.3698977605431 NA promoter-TSS (NM_026381) promoter-TSS (NM_026381) 35 NM_026381 66940 Mm.196533 NM_025858 ENSMUSG00000025647 Shisa5 2310008D10Rik|6430628I05Rik|Scotin|mShisa5 shisa family member 5 protein-coding common_peak1_1378_14956_0.314109510630908_14.0255879705753_86.1762082569678 chr4 130911817 130923918 + 86.1762082569678 NA intron (NM_010686, intron 1 of 7) intron (NM_010686, intron 1 of 7) 4533 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding common_peak2_1116_11186_0.360225254631947_13.6296482098108_86.156533113609 chr4 126251487 126263042 + 86.156533113609 NA promoter-TSS (NM_001145970) promoter-TSS (NM_001145970) -945 NM_001145970 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding common_peak2_534_3873_0.587467767630841_12.2133421224187_85.8845580676318 chr13 24632447 24642640 + 85.8845580676318 NA intron (NM_178658, intron 1 of 13) intron (NM_178658, intron 1 of 13) -1105 NM_001080381 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak2_1131_11401_0.356367425682414_13.6551829989743_85.8327222014674 chr2 166444838 166450638 + 85.8327222014674 NA non-coding (NR_015558, exon 1 of 3) non-coding (NR_015558, exon 1 of 3) 287 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak1_1325_14192_0.320396057155822_13.9530899748107_85.260442704875 chr8 84978834 84987131 + 85.260442704875 NA Intergenic Intergenic -4234 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak1_1018_9857_0.380185940775602_13.457172236059_85.1441974408716 chr5 23431761 23436147 + 85.1441974408716 NA promoter-TSS (NM_026984) promoter-TSS (NM_026984) 399 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak2_370_2203_0.753369366137424_11.4825931916399_85.1230726270285 chr10 120977618 120980613 + 85.1230726270285 NA exon (NM_001081193, exon 1 of 13) exon (NM_001081193, exon 1 of 13) 215 NM_001081193 380664 Mm.339371 NM_001081193 ENSMUSG00000048661 Lemd3 AI316861|Man1 LEM domain containing 3 protein-coding common_peak2_960_9080_0.394924930540199_13.3460979258188_85.063105566069 chr11 49080367 49096488 + 85.063105566069 NA intron (NM_010999, intron 2 of 5) intron (NM_010999, intron 2 of 5) 1410 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_797_6975_0.446462815225072_12.9914157323895_85.0384061460414 chr13 101690856 101704245 + 85.0384061460414 NA intron (NM_001077495, intron 7 of 15) intron (NM_001077495, intron 7 of 15) -4920 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_887_8124_0.415603003233221_13.1959535993072_84.9423415849411 chr11 100931032 100940810 + 84.9423415849411 NA intron (NM_213659, intron 1 of 23) B1F|SINE|Alu 3619 NM_213660 20848 Mm.249934 NM_011486 ENSMUSG00000004040 Stat3 1110034C02Rik|AW109958|Aprf signal transducer and activator of transcription 3 protein-coding common_peak2_826_7346_0.434876376570674_13.0603777475705_84.6638263990406 chr14 105892674 105899787 + 84.6638263990406 NA intron (NM_011897, intron 1 of 1) CpG 589 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty homolog 2 (Drosophila) protein-coding common_peak2_638_5059_0.516506908571914_12.5631751238676_84.5889421309149 chr4 63382948 63393306 + 84.5889421309149 NA intron (NM_001305432, intron 3 of 20) intron (NM_001305432, intron 3 of 20) 10113 NM_001305432 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak1_1154_11747_0.34883409347982_13.6945445970648_84.4904910692842 chr10 13964164 13968600 + 84.4904910692842 NA promoter-TSS (NM_010437) promoter-TSS (NM_010437) 3 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_368_2190_0.752338528381772_11.4735430331811_84.4173307491823 chr10 120977704 120980492 + 84.4173307491823 NA exon (NM_001081193, exon 1 of 13) exon (NM_001081193, exon 1 of 13) 232 NM_001081193 380664 Mm.339371 NM_001081193 ENSMUSG00000048661 Lemd3 AI316861|Man1 LEM domain containing 3 protein-coding common_peak2_219_915_1.09531185266168_10.3868597144278_84.2970254683314 chr5 136565460 136568491 + 84.2970254683314 NA promoter-TSS (NM_001291239) promoter-TSS (NM_001291239) 515 NM_001291234 13047 Mm.320317 NM_009986 ENSMUSG00000029705 Cux1 CDP|Cutl1|Cux|Cux-1 cut-like homeobox 1 protein-coding common_peak1_905_8370_0.408082950184347_13.235225737233_84.1535516279594 chr19 10984233 10990918 + 84.1535516279594 NA intron (NM_001034898, intron 1 of 6) intron (NM_001034898, intron 1 of 6) 5675 NM_001034898 545279 Mm.329729 NM_001034898 ENSMUSG00000067571 Ms4a15 E530011F12Rik|Gm1286 membrane-spanning 4-domains, subfamily A, member 15 protein-coding common_peak1_1125_11348_0.35368455307349_13.6471198383073_84.0732083214874 chr2 166445304 166450723 + 84.0732083214874 NA non-coding (NR_015558, exon 1 of 3) non-coding (NR_015558, exon 1 of 3) 562 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak2_655_5266_0.505126765656891_12.6153291269824_83.888089852656 chr2 25179581 25186785 + 83.888089852656 NA 3' UTR (NM_025980, exon 1 of 1) 3' UTR (NM_025980, exon 1 of 1) 2425 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak1_680_5566_0.491394895275183_12.6883818155034_83.5168688118595 chr8 120736333 120743390 + 83.5168688118595 NA exon (NM_001301811, exon 2 of 9) exon (NM_001301811, exon 2 of 9) 1222 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_770_6660_0.452213098735525_12.9276296159422_83.4772789387999 chr10 62504079 62509377 + 83.4772789387999 NA intron (NM_011157, intron 1 of 2) intron (NM_011157, intron 1 of 2) 1027 NM_011157 19073 Mm.338790 NM_011157 ENSMUSG00000020077 Srgn Prg|Prg1|Sgc serglycin protein-coding common_peak1_788_6889_0.44428726783709_12.9724319015102_83.1396778738752 chr5 113636490 113643685 + 83.1396778738752 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 10303 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak1_1229_12852_0.330478163662848_13.815056597452_82.4777218298346 chr8 84196872 84204747 + 82.4777218298346 NA Intergenic GC_rich|Low_complexity|Low_complexity -7709 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA common_peak2_627_4963_0.513412856648007_12.5339938284544_81.9541684947577 chr12 101022993 101029896 + 81.9541684947577 NA intron (NM_026681, intron 2 of 29) ID_B1|SINE|B4 2539 NM_026681 68339 Mm.156217 NM_026681 ENSMUSG00000021182 Ccdc88c 0610010D24Rik|AV000935|AW324073|Daple|mKIAA1509 coiled-coil domain containing 88C protein-coding common_peak2_260_1251_0.946913499886518_10.7634755968759_81.8414851272314 chr13 9763151 9765472 + 81.8414851272314 NA intron (NM_001199141, intron 1 of 14) CpG 1003 NM_001199141 66505 Mm.397307 NM_144516 ENSMUSG00000021156 Zmynd11 2210402G22Rik|BS69 zinc finger, MYND domain containing 11 protein-coding common_peak2_1078_10734_0.358476213497045_13.5692726774947_81.8375172640969 chr18 80701882 80716467 + 81.8375172640969 NA intron (NM_198429, intron 1 of 9) intron (NM_198429, intron 1 of 9) -1001 NM_001164112 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_520_3763_0.582100402917066_12.1691011141871_81.8163625608879 chr1 194990399 195000662 + 81.8163625608879 NA Intergenic Intergenic -18571 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA common_peak1_586_4496_0.536476074128183_12.4029852057331_81.7331434407832 chr5 112290882 112297389 + 81.7331434407832 NA intron (NM_009419, intron 1 of 6) intron (NM_009419, intron 1 of 6) 17428 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_915_8565_0.394286555239843_13.261549239511_79.9905846288767 chr16 49853159 49861286 + 79.9905846288767 NA intron (NM_010581, intron 1 of 9) intron (NM_010581, intron 1 of 9) 1568 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_521_3793_0.574040694594016_12.1765243107085_79.9634238500419 chr11 75530358 75534909 + 79.9634238500419 NA exon (NM_173388, exon 2 of 14) exon (NM_173388, exon 2 of 14) 521 NM_001199283 215113 Mm.11186 NM_173388 ENSMUSG00000038178 Slc43a2 7630402D21Rik|BC042513|Lat4 solute carrier family 43, member 2 protein-coding common_peak2_359_2141_0.741272806373441_11.435379167937_79.8456058549655 chr17 65883926 65886931 + 79.8456058549655 NA promoter-TSS (NM_001198949) promoter-TSS (NM_001198949) 327 NM_009067 19765 Mm.17009 NM_009067 ENSMUSG00000024096 Ralbp1 RLIP76|Rip1 ralA binding protein 1 protein-coding common_peak2_252_1199_0.953023526725481_10.7053304538586_79.5730931803811 chr14 25558698 25564193 + 79.5730931803811 NA intron (NM_001310666, intron 3 of 23) B4A|SINE|B4 -25359 NR_033492 77592 Mm.444871 NM_175264 4931406H21Rik - RIKEN cDNA 4931406H21 gene ncRNA common_peak2_199_792_1.13467506999147_10.1985145906997_79.4230776072221 chr1 59762261 59764955 + 79.4230776072221 NA promoter-TSS (NM_007561) promoter-TSS (NM_007561) -671 NM_007561 12168 Mm.7106 NM_007561 ENSMUSG00000067336 Bmpr2 2610024H22Rik|AL117858|AW546137|BB189135|BMP-2|BMPR-2|BMPR-II|BMPRII|BRK-3|Gm20272 bone morphogenetic protein receptor, type II (serine/threonine kinase) protein-coding common_peak1_810_7221_0.425060653928695_13.030713031913_79.2127103543616 chr14 105893207 105899560 + 79.2127103543616 NA intron (NM_011897, intron 1 of 1) CpG 436 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty homolog 2 (Drosophila) protein-coding common_peak1_821_7361_0.421202349490439_13.0564832091293_79.2080889340565 chr12 112616108 112621433 + 79.2080889340565 NA Intergenic Intergenic -1277 NM_007421 11565 Mm.3440 NM_007421 ENSMUSG00000011148 Adssl1 AI528595|Adss|Adss1 adenylosuccinate synthetase like 1 protein-coding common_peak2_73_1314_-1.3544511217819_9.68362152328871_78.960737261815 chr5 24393512 24395233 + 78.960737261815 NA 5' UTR (NM_029020, exon 1 of 16) 5' UTR (NM_029020, exon 1 of 16) 216 NM_029020 74610 Mm.283914 NM_029020 ENSMUSG00000028973 Abcb8 4833412N02Rik|AA409895 ATP-binding cassette, sub-family B (MDR/TAP), member 8 protein-coding common_peak2_640_5151_0.496041790472001_12.5789377733506_78.9110594828625 chr7 31036015 31044001 + 78.9110594828625 NA TTS (NR_106017) TTS (NR_106017) 309 NR_106017 102465635 NR_106017 ENSMUSG00000098783 Mir7050 Gm27578|mmu-mir-7050 microRNA 7050 ncRNA common_peak1_357_2130_0.738842018826421_11.4267358871959_78.7943522926362 chr17 65884044 65886862 + 78.7943522926362 NA promoter-TSS (NM_001198949) promoter-TSS (NM_001198949) 302 NM_009067 19765 Mm.17009 NM_009067 ENSMUSG00000024096 Ralbp1 RLIP76|Rip1 ralA binding protein 1 protein-coding common_peak2_797_7064_0.428173294780697_13.0005604926117_78.7353532902333 chr17 52157874 52169772 + 78.7353532902333 NA Intergenic RSINE1|SINE|B4 281096 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA common_peak2_1240_13089_0.319873792147453_13.8361143729063_78.4002242321124 chr8 84196424 84206092 + 78.4002242321124 NA Intergenic Intergenic -7260 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA common_peak2_858_7851_0.406154018376139_13.1419214666542_78.1433899398464 chr8 120527731 120540942 + 78.1433899398464 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) -1521 NM_001145897 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_1115_11316_0.341971912041826_13.6371899033927_78.0727695979278 chr6 48673832 48692639 + 78.0727695979278 NA Intergenic Lx8|LINE|L1 -1343 NM_001243200 107526 Mm.333048 NM_174990 ENSMUSG00000054435 Gimap4 AU019574|E430007K16Rik|Ian-1|Ian1|Imap4 GTPase, IMAP family member 4 protein-coding common_peak2_271_1366_0.893187978113534_10.8633915166628_78.0072616648499 chr7 75792989 75797246 + 78.0072616648499 NA Intergenic ORR1F|LTR|ERVL-MaLR -53221 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_50_998_-1.61667009066496_9.15600582245994_77.9262698044462 chr12 86949680 86950554 + 77.9262698044462 NA intron (NM_001289432, intron 1 of 4) intron (NM_001289432, intron 1 of 4) 2774 NM_001289432 217732 Mm.22337 NM_173735 ENSMUSG00000034157 Cipc 2310044G17Rik|AI842544|AI853744|Kiaa1737|mKIAA1737 CLOCK interacting protein, circadian protein-coding common_peak1_106_1752_-1.11663986140377_10.2172903500577_77.7036336127604 chr1 172513160 172513995 + 77.7036336127604 NA Intergenic Intergenic -7553 NM_027972 71870 Mm.78373 NM_027972 ENSMUSG00000026546 Cfap45 1700028D05Rik|Ccdc19|Nesg1 cilia and flagella associated protein 45 protein-coding common_peak1_830_7499_0.413679684930209_13.0795147227357_77.6651441067815 chr10 75315738 75321253 + 77.6651441067815 NA intron (NM_009630, intron 1 of 2) intron (NM_009630, intron 1 of 2) 1618 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_202_823_1.10569889659482_10.2393499754806_77.5745809583365 chr18 80553459 80556195 + 77.5745809583365 NA Intergenic Intergenic -10281 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_50_996_-1.61377891727074_9.15456023576283_77.5699392477999 chr5 135537443 135538160 + 77.5699392477999 NA intron (NM_146001, intron 1 of 30) MTEa|LTR|ERVL-MaLR 7321 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak2_843_7667_0.409189339843524_13.1092292915899_77.5663431680204 chr14 54143184 54154733 + 77.5663431680204 NA Intergenic Intergenic 104971 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_94_1586_-1.18361662255997_10.0402781015552_77.069987075475 chr1 118387946 118389285 + 77.069987075475 NA promoter-TSS (NM_029709) promoter-TSS (NM_029709) -443 NM_001293300 76707 Mm.138740 NM_029709 ENSMUSG00000064302 Clasp1 1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha CLIP associating protein 1 protein-coding common_peak1_26_664_-2.15500296354896_8.29970904861407_76.8591615962955 chr13 23543796 23544350 + 76.8591615962955 NA promoter-TSS (NM_013548) promoter-TSS (NM_013548) 21 NM_013548 260423 Mm.221389 NM_013548 ENSMUSG00000100210 Hist1h3f H3.2-221|Hist1 histone cluster 1, H3f protein-coding common_peak2_440_2969_0.628898053529124_11.8506962424527_76.6279862473502 chr4 11703551 11708066 + 76.6279862473502 NA intron (NM_010276, intron 1 of 4) intron (NM_010276, intron 1 of 4) 1361 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding common_peak2_283_1479_0.855002707703415_10.958882814368_76.3637713773517 chr14 25605341 25609373 + 76.3637713773517 NA intron (NM_001310666, intron 6 of 23) CpG 3844 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak2_462_3201_0.606536998705316_11.9480260918689_76.1975888283456 chr1 21315483 21328074 + 76.1975888283456 NA Intergenic RMER19B|LTR|ERVK -23466 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo common_peak2_674_5589_0.469786172865684_12.6835256541634_76.1384270096194 chr7 128047450 128056689 + 76.1384270096194 NA Intergenic RMER1B|Other|Other -10571 NM_001082960 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak1_904_8485_0.386443939063945_13.2440909328227_75.9656544182321 chr17 35422638 35427025 + 75.9656544182321 NA promoter-TSS (NM_023124) promoter-TSS (NM_023124) -16 NM_023124 15019 Mm.486287 NM_023124 H2-Q8 H-2Q8|MMS10-T|Ms10t|Qa-2|Qa-8|Qa8 histocompatibility 2, Q region locus 8 protein-coding common_peak1_772_6791_0.428699951519082_12.9439707193126_75.9057579372272 chr2 166618933 166624342 + 75.9057579372272 NA intron (NM_177782, intron 5 of 39) MTEa|LTR|ERVL-MaLR -51081 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak2_467_3257_0.600531699608339_11.9700367383297_75.8729688769002 chr10 21202545 21208174 + 75.8729688769002 NA Intergenic Intergenic -44375 NM_010848 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding common_peak2_959_9218_0.371323436215366_13.3560562704218_75.7680064564351 chr7 16308358 16315794 + 75.7680064564351 NA intron (NM_133234, intron 1 of 3) intron (NM_133234, intron 1 of 3) 2493 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak2_786_6972_0.422520326379487_12.9788239294765_75.5657065876561 chr2 126672685 126677093 + 75.5657065876561 NA intron (NM_001271470, intron 1 of 8) CpG 703 NM_001271469 14391 Mm.293266 NM_010249 ENSMUSG00000027361 Gabpb1 BABPB2|E4TF1|E4TF1-47|E4TF1-53|E4Tf1B|GABPB|GABPB-1|GABPB-2|GABPB1-1|GABPB1-2|NRF2B1|NRF2B2 GA repeat binding protein, beta 1 protein-coding common_peak2_387_2446_0.681764599656731_11.5976806859078_75.5416334420466 chr19 4229649 4233213 + 75.5416334420466 NA promoter-TSS (NM_027196) promoter-TSS (NM_027196) -462 NM_027196 69745 Mm.32518 NM_027196 ENSMUSG00000024854 Pold4 2410012M21Rik|AI463381|AW060307|Polds|p12 polymerase (DNA-directed), delta 4 protein-coding common_peak2_622_4985_0.492887310538157_12.5301108227606_75.3668081503271 chr2 156874596 156881010 + 75.3668081503271 NA intron (NM_029983, intron 5 of 7) intron (NM_029983, intron 5 of 7) 9275 NM_029983 77799 Mm.29264 NM_029983 ENSMUSG00000027636 Sla2 A930009E21Rik|AI430952|SLAP-2|SLAP2 Src-like-adaptor 2 protein-coding common_peak2_931_8856_0.376733779717712_13.3009692933877_75.0856876520361 chr5 72739570 72754011 + 75.0856876520361 NA intron (NM_001289495, intron 1 of 14) intron (NM_001289495, intron 1 of 14) 5987 NM_001289494 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak2_520_3837_0.554012319450221_12.1831451559205_74.8652420056927 chr15 73730220 73736293 + 74.8652420056927 NA intron (NM_001166388, intron 1 of 5) intron (NM_001166388, intron 1 of 5) 8326 NM_001166388 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak2_263_1320_0.88974212997312_10.8122858162334_74.7641339851301 chr14 73324654 73327003 + 74.7641339851301 NA promoter-TSS (NM_009029) promoter-TSS (NM_009029) -37 NM_009029 19645 Mm.273862 NM_009029 ENSMUSG00000022105 Rb1 Rb|Rb-1|pRb retinoblastoma 1 protein-coding common_peak1_78_105_2.39417863655012_7.92500977283826_73.8411182302486 chr4 3937277 3938531 + 73.8411182302486 NA promoter-TSS (NM_001285804) promoter-TSS (NM_001285804) 501 NM_019969 56711 Mm.331467 NM_019969 ENSMUSG00000003282 Plag1 - pleiomorphic adenoma gene 1 protein-coding common_peak1_630_5106_0.48087341988597_12.5586970536554_73.1371629946658 chr19 47507270 47512915 + 73.1371629946658 NA intron (NM_175360, intron 8 of 9) intron (NM_175360, intron 8 of 9) -2890 NR_045322 100503104 Mm.442735 NR_045322 ENSMUSG00000097990 Gm19557 - predicted gene, 19557 ncRNA common_peak2_355_2158_0.710095463114397_11.4311952595797_73.0650122106891 chr12 113422710 113427421 + 73.0650122106891 NA Intergenic (CAGCT)n|Simple_repeat|Simple_repeat -64500 NM_001009545 238405 Mm.442216 NM_001009545 ENSMUSG00000051804 Adam6b 4930523C11Rik a disintegrin and metallopeptidase domain 6B protein-coding common_peak1_83_1410_-1.23180300642605_9.84660076938424_73.0131838236142 chr5 31201357 31202361 + 73.0131838236142 NA TTS (NM_008014) TTS (NM_008014) 183 NM_001177901 101023 Mm.45033 NM_175311 ENSMUSG00000043059 Zfp513 AW990386|D430028M17Rik|Znf513 zinc finger protein 513 protein-coding common_peak1_257_1282_0.891168542503907_10.7708897263416_72.9019192416985 chr14 73324769 73326737 + 72.9019192416985 NA promoter-TSS (NM_009029) promoter-TSS (NM_009029) 38 NM_009029 19645 Mm.273862 NM_009029 ENSMUSG00000022105 Rb1 Rb|Rb-1|pRb retinoblastoma 1 protein-coding common_peak2_634_5157_0.477720223263152_12.5714561694208_72.8591510802713 chr15 74928263 74935951 + 72.8591510802713 NA Intergenic RLTR6-int|LTR|ERV1 -22944 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak2_1022_10125_0.348421365105631_13.4799874514626_72.7070692719323 chr8 84658433 84665608 + 72.7070692719323 NA 3' UTR (NM_010499, exon 1 of 1) 3' UTR (NM_010499, exon 1 of 1) 832 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding common_peak2_738_6414_0.431487304713787_12.8629772023339_72.6986671248454 chr17 35436893 35441451 + 72.6986671248454 NA promoter-TSS (NM_001201460) promoter-TSS (NM_001201460) 5 NM_001201460 110558 Mm.431282 NM_001201460 H2-Q9 H-2Q9|Ped|Qa-2|Qa-9|Qa9 histocompatibility 2, Q region locus 9 protein-coding common_peak2_736_6396_0.430745345352028_12.8585524406016_72.2718381547668 chr8 46737749 46743301 + 72.2718381547668 NA intron (NM_008391, intron 1 of 8) CpG 780 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak2_812_7353_0.403288588297395_13.045957755352_72.1289555044536 chr12 112616412 112621570 + 72.1289555044536 NA Intergenic Intergenic -1056 NM_007421 11565 Mm.3440 NM_007421 ENSMUSG00000011148 Adssl1 AI528595|Adss|Adss1 adenylosuccinate synthetase like 1 protein-coding common_peak1_106_1710_-1.08165362513364_10.1997972319226_72.0479698605138 chr8 123033827 123035830 + 72.0479698605138 NA intron (NR_037865, intron 1 of 13) B3A|SINE|B2 7456 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_651_5370_0.466094060138547_12.6240220362248_71.8947509646397 chr9 62340637 62345616 + 71.8947509646397 NA intron (NM_009672, intron 1 of 6) CpG 1783 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_34_749_-1.86930107085971_8.61609624995339_71.8909193647254 chr18 38338403 38339029 + 71.8909193647254 NA intron (NM_011937, intron 1 of 6) intron (NM_011937, intron 1 of 6) 277 NM_011937 26384 Mm.22374 NM_011937 ENSMUSG00000052102 Gnpda1 GNPDA|Gnp1|Gnpi|oscillin glucosamine-6-phosphate deaminase 1 protein-coding common_peak2_832_7615_0.395790716197171_13.0927131214065_71.7446124937467 chr12 76365679 76373398 + 71.7446124937467 NA promoter-TSS (NM_028356) promoter-TSS (NM_028356) 22 NM_028356 109929 Mm.41880 NM_028356 ENSMUSG00000056459 Zbtb25 2810462M08Rik|2900064P18Rik|AI842128|Kup|Zfp-50|Zfp50 zinc finger and BTB domain containing 25 protein-coding common_peak2_1099_11211_0.329865198604454_13.6176886283347_71.6867044390827 chr5 64802228 64815192 + 71.6867044390827 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 5187 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_111_1775_-1.05462649395947_10.2671026193704_71.6844125256844 chr5 148865600 148869078 + 71.6844125256844 NA Intergenic Intergenic 61308 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak1_333_1962_0.734514459408144_11.3061016871702_71.679729953995 chr2 20967277 20970144 + 71.679729953995 NA promoter-TSS (NM_001128084) promoter-TSS (NM_001128084) -164 NR_033225 433408 Mm.386941 NR_033225 Gm13375 OTTMUSG00000011664 predicted gene 13375 ncRNA common_peak2_1057_10628_0.338011650154163_13.5447240759166_71.5664095375457 chr9 118476154 118490175 + 71.5664095375457 NA intron (NM_001164789, intron 5 of 5) RMER17C|LTR|ERVK 4975 NM_010136 13813 Mm.200692 NM_010136 ENSMUSG00000032446 Eomes C77258|TBR-2|Tbr2 eomesodermin protein-coding common_peak2_789_7069_0.409322489481232_12.9921557444374_71.553625058641 chr2 32150342 32158030 + 71.553625058641 NA intron (NM_001159634, intron 1 of 31) RSINE1|SINE|B4 3038 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak2_486_3505_0.565116097448643_12.0581683294839_71.4272630199501 chr13 51733945 51739924 + 71.4272630199501 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 56813 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_382_2434_0.665904239958714_11.5826581769491_71.3364703902129 chr19 4229812 4233137 + 71.3364703902129 NA promoter-TSS (NM_027196) promoter-TSS (NM_027196) -419 NM_027196 69745 Mm.32518 NM_027196 ENSMUSG00000024854 Pold4 2410012M21Rik|AI463381|AW060307|Polds|p12 polymerase (DNA-directed), delta 4 protein-coding common_peak2_498_3637_0.554872774757953_12.1063662150305_71.1840146728565 chr5 21184328 21192522 + 71.1840146728565 NA intron (NM_175437, intron 1 of 30) intron (NM_175437, intron 1 of 30) 2158 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_1149_11928_0.319098801534322_13.7017348882693_71.1217964124674 chr14 54222596 54229104 + 71.1217964124674 NA Intergenic Intergenic 28079 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_801_7232_0.403116859604214_13.0219368661258_70.8932840328125 chr17 28206359 28213885 + 70.8932840328125 NA intron (NM_027185, intron 1 of 10) GA-rich|Low_complexity|Low_complexity 2344 NM_027185 23853 Mm.204731 NM_027185 ENSMUSG00000002257 Def6 2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6 differentially expressed in FDCP 6 protein-coding common_peak2_723_6256_0.431176549149734_12.8268436632742_70.8614703473618 chr6 50371955 50385134 + 70.8614703473618 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 4293 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_600_4789_0.487123625300791_12.4693717532739_70.5839797827645 chr9 107549443 107555719 + 70.5839797827645 NA intron (NM_001243748, intron 1 of 5) B1_Mur1|SINE|Alu 1026 NM_001243748 56289 Mm.12091 NM_019713 ENSMUSG00000010067 Rassf1 123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family member 1 protein-coding common_peak1_321_1862_0.7451972656037_11.2360105917435_70.3251872464564 chr5 114172991 114173259 + 70.3251872464564 NA intron (NM_133904, intron 1 of 51) MT2B2|LTR|ERVL 7607 NM_133904 100705 Mm.81793 NM_133904 ENSMUSG00000042010 Acacb AI597064|AW743042|Acc2|Accb acetyl-Coenzyme A carboxylase beta protein-coding common_peak2_487_3528_0.559312669826316_12.0647000496929_70.2852072012294 chr10 39454385 39465891 + 70.2852072012294 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 90339 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_1090_11112_0.32812219047905_13.6040218055464_70.2827467410942 chr6 48735701 48749516 + 70.2827467410942 NA exon (NM_008376, exon 3 of 3) exon (NM_008376, exon 3 of 3) 3561 NM_008376 16205 Mm.252599 NM_008376 ENSMUSG00000090019 Gimap1 IAP38|Imap38|imap GTPase, IMAP family member 1 protein-coding common_peak1_870_8137_0.379090050150845_13.1800035901491_69.9535121477036 chr11 11684379 11692266 + 69.9535121477036 NA intron (NM_001025597, intron 1 of 7) intron (NM_001025597, intron 1 of 7) -1855 NM_001301865 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_383_2458_0.656368693241438_11.5920403662168_69.8219403108949 chr5 34195037 34199246 + 69.8219403108949 NA intron (NM_001015039, intron 11 of 12) intron (NM_001015039, intron 11 of 12) -9431 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding common_peak2_811_7379_0.396018945202993_13.0474145735493_69.615691312134 chr8 117277549 117290026 + 69.615691312134 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 26768 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_63_1121_-1.38237907511091_9.44066742305334_69.5589824797844 chr8 84063688 84064861 + 69.5589824797844 NA Intergenic Intergenic -2562 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding common_peak2_69_1200_-1.32196240999574_9.56903923070776_69.5251186091339 chrX 101428349 101430701 + 69.5251186091339 NA promoter-TSS (NM_023144) promoter-TSS (NM_023144) -126 NM_023144 53610 Mm.280069 NM_023144 ENSMUSG00000031311 Nono AA407051|AV149256|NRB54|P54NRB|nonA non-POU-domain-containing, octamer binding protein protein-coding common_peak1_77_1305_-1.25138342075221_9.72524747117032_69.2321377298281 chr11 118226593 118227662 + 69.2321377298281 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -14385 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak2_165_602_1.20010398845462_9.83606618612739_69.1534933296492 chr13 49370282 49372720 + 69.1534933296492 NA intron (NM_001039179, intron 2 of 6) intron (NM_001039179, intron 2 of 6) 29952 NM_001039180 76895 Mm.197387 NM_029791 ENSMUSG00000037933 Bicd2 - bicaudal D homolog 2 (Drosophila) protein-coding common_peak2_52_973_-1.51203619663923_9.17175986376273_69.1231712116608 chr11 119055700 119057642 + 69.1231712116608 NA Intergenic CpG -15758 NM_013926 30951 Mm.99953 NM_013926 ENSMUSG00000025578 Cbx8 Pc3 chromobox 8 protein-coding common_peak2_153_2322_-0.878439586849385_10.7425536453841_69.1024772586167 chr13 23530185 23532637 + 69.1024772586167 NA TTS (NM_153173) TTS (NM_153173) 367 NM_153173 69386 Mm.158272 NM_153173 ENSMUSG00000060981 Hist1h4h 1700024H08Rik histone cluster 1, H4h protein-coding common_peak1_157_2374_-0.865000395806_10.7812116002027_68.8826255427612 chr13 55431244 55433404 + 68.8826255427612 NA Intergenic L1MA4|LINE|L1 -5520 NM_021489 58992 Mm.42224 NM_021489 ENSMUSG00000021492 F12 FXII|HAF coagulation factor XII (Hageman factor) protein-coding common_peak2_664_5570_0.448285298884104_12.6678632500986_68.5804249914191 chr15 80005466 80016652 + 68.5804249914191 NA intron (NM_011057, intron 1 of 6) intron (NM_011057, intron 1 of 6) 3749 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak1_1006_9986_0.340466294598839_13.4560688031608_68.2982044562504 chr11 68440236 68449526 + 68.2982044562504 NA intron (NM_177320, intron 1 of 18) L1MB3|LINE|L1 12756 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak2_511_3812_0.532604003330833_12.1630128173915_68.2755811092551 chr7 49090845 49097428 + 68.2755811092551 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 135063 NM_001111016 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_429_2941_0.597863537063796_11.8215132997867_67.9165109527416 chr11 53802166 53808448 + 67.9165109527416 NA intron (NR_033332, intron 3 of 3) B2_Mm2|SINE|B2 34834 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_1041_10476_0.331825574750537_13.5208508394567_67.8462871717079 chr6 129732493 129753792 + 67.8462871717079 NA Intergenic Intergenic -2658 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak2_418_2830_0.607490396410938_11.7708412321112_67.648220701106 chr7 67371435 67374004 + 67.648220701106 NA 5' UTR (NM_001291196, exon 1 of 12) 5' UTR (NM_001291196, exon 1 of 12) 139 NM_001291192 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak2_194_816_1.0468567683405_10.1976206523159_67.6436426221957 chr6 86568760 86572156 + 67.6436426221957 NA Intergenic Intergenic 43057 NR_037961 72012 Mm.349174 NR_037960 ENSMUSG00000097048 1600020E01Rik - RIKEN cDNA 1600020E01 gene ncRNA common_peak2_596_4780_0.478019619653008_12.4621065001742_67.6281081075837 chr15 75109868 75120230 + 67.6281081075837 NA Intergenic Intergenic -3100 NM_001099217 100041546 Mm.482110 NM_001099217 ENSMUSG00000022584 Ly6c2 Ly-6C.2|Ly-6C2 lymphocyte antigen 6 complex, locus C2 protein-coding common_peak1_762_6792_0.405445205946743_12.9325557418217_67.387876500185 chr2 126673682 126676727 + 67.387876500185 NA intron (NM_001271470, intron 1 of 8) CpG 388 NM_001271469 14391 Mm.293266 NM_010249 ENSMUSG00000027361 Gabpb1 BABPB2|E4TF1|E4TF1-47|E4TF1-53|E4Tf1B|GABPB|GABPB-1|GABPB-2|GABPB1-1|GABPB1-2|NRF2B1|NRF2B2 GA repeat binding protein, beta 1 protein-coding common_peak2_332_1988_0.710225122684234_11.3129401221759_67.3553729025717 chr2 20967295 20970284 + 67.3553729025717 NA promoter-TSS (NR_033225) promoter-TSS (NR_033225) -85 NR_033225 433408 Mm.386941 NR_033225 Gm13375 OTTMUSG00000011664 predicted gene 13375 ncRNA common_peak2_728_6370_0.417306993193245_12.8459576187028_67.24781981926 chr9 45244906 45256576 + 67.24781981926 NA TTS (NM_001198971) TTS (NM_001198971) 15966 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak2_375_2403_0.651746840273901_11.5570946008481_67.1931000855201 chr6 54933267 54941550 + 67.1931000855201 NA exon (NM_001171007, exon 7 of 12) exon (NM_001171007, exon 7 of 12) 34253 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak1_417_2826_0.605301759879923_11.7677070477711_67.0700287025534 chr7 67371543 67374072 + 67.0700287025534 NA promoter-TSS (NM_001291196) promoter-TSS (NM_001291196) 51 NM_001291192 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak1_707_6115_0.424512852207014_12.7906291174643_66.9533033381064 chr8 120794033 120801379 + 66.9533033381064 NA Intergenic Intergenic 59067 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_45_868_-1.59813925153454_8.96414274104713_66.755709019885 chr16 36984811 36986823 + 66.755709019885 NA Intergenic ORR1D1|LTR|ERVL-MaLR -6681 NM_001037321 207215 Mm.211899 NM_001037321 ENSMUSG00000047746 Fbxo40 9830003A13Rik|mKIAA1195 F-box protein 40 protein-coding common_peak1_263_1374_0.831940977920565_10.8411863922597_66.7267950167249 chr1 177257009 177259093 + 66.7267950167249 NA Intergenic CpG -9284 NM_011785 23797 Mm.235194 NM_011785 ENSMUSG00000019699 Akt3 AI851531|D930002M15Rik|Nmf350 thymoma viral proto-oncogene 3 protein-coding common_peak2_819_7529_0.384339324757168_13.0706038119379_66.6735438633011 chr15 86179697 86186914 + 66.6735438633011 NA intron (NM_145475, intron 1 of 12) B1_Mm|SINE|Alu 2836 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding common_peak1_241_1191_0.884010635359642_10.661173838142_66.4930158895755 chr13 9763530 9765490 + 66.4930158895755 NA intron (NM_001199141, intron 1 of 14) CpG 804 NM_001199141 66505 Mm.397307 NM_144516 ENSMUSG00000021156 Zmynd11 2210402G22Rik|BS69 zinc finger, MYND domain containing 11 protein-coding common_peak2_610_4970_0.462815614558243_12.5107281952217_65.5727891257433 chr7 66382757 66389509 + 65.5727891257433 NA intron (NM_146191, intron 1 of 33) Lx7|LINE|L1 2208 NM_146191 233328 Mm.33284 NM_146191 ENSMUSG00000015133 Lrrk1 AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790 leucine-rich repeat kinase 1 protein-coding common_peak2_429_2968_0.584683690331969_11.8281032231526_65.2662195455774 chr1 144002566 144008066 + 65.2662195455774 NA Intergenic Intergenic -1167 NM_009061 19735 Mm.28262 NM_009061 ENSMUSG00000026360 Rgs2 GOS8 regulator of G-protein signaling 2 protein-coding common_peak2_131_400_1.38308614357867_9.33900149824425_65.2411906586503 chr15 79356243 79358436 + 65.2411906586503 NA intron (NM_001304830, intron 2 of 2) CpG 8937 NM_001304832 17133 Mm.86646 NM_010755 ENSMUSG00000042622 Maff - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) protein-coding common_peak2_204_905_0.986181611897512_10.316458045995_65.212512221093 chr10 25359185 25361079 + 65.212512221093 NA intron (NM_001199265, intron 1 of 19) CpG 334 NM_001199265 13822 Mm.306026 NM_013511 ENSMUSG00000019978 Epb41l2 4.1G|AW555191|D10Ertd398e|Epb4.1l2|NBL2 erythrocyte membrane protein band 4.1 like 2 protein-coding common_peak1_128_383_1.40489918568608_9.28741209356419_64.9743135281184 chr15 50887766 50889608 + 64.9743135281184 NA TTS (NR_035444) TTS (NR_035444) 362 NM_001310481 83925 Mm.30466 NM_032000 ENSMUSG00000038679 Trps1 AI115454|AI447310|D15Ertd586e trichorhinophalangeal syndrome I (human) protein-coding common_peak2_533_4096_0.503413018623528_12.2520586867921_64.886495283565 chr1 21365053 21375770 + 64.886495283565 NA TTS (NM_001033904) TTS (NM_001033904) 2080 NM_001033904 433278 Mm.26006 NM_001033904 ENSMUSG00000041722 Khdc1c Khdc1b KH domain containing 1C protein-coding common_peak2_584_4677_0.473507406287036_12.4284298494959_64.8284282298721 chr19 5636044 5639223 + 64.8284282298721 NA 5' UTR (NM_009045, exon 1 of 11) 5' UTR (NM_009045, exon 1 of 11) 143 NM_009045 19697 Mm.249966 NM_009045 ENSMUSG00000024927 Rela p65 v-rel reticuloendotheliosis viral oncogene homolog A (avian) protein-coding common_peak2_725_6371_0.409783120449779_12.8424221117502_64.6945241357987 chr11 83555947 83564045 + 64.6945241357987 NA Intergenic B2_Mm2|SINE|B2 18640 NM_011338 20308 Mm.416125 NM_011338 ENSMUSG00000019122 Ccl9 CCF18|MRP-2|Scya10|Scya9 chemokine (C-C motif) ligand 9 protein-coding common_peak1_1407_15860_0.266275497709987_14.0863338609571_64.6776594066251 chr5 113823329 113834023 + 64.6776594066251 NA intron (NM_009151, intron 1 of 1) intron (NM_009151, intron 1 of 1) 1825 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak1_70_1182_-1.27507481249277_9.5706969520934_64.6343943662403 chr5 24393677 24394840 + 64.6343943662403 NA 5' UTR (NM_029020, exon 1 of 16) 5' UTR (NM_029020, exon 1 of 16) 102 NM_029020 74610 Mm.283914 NM_029020 ENSMUSG00000028973 Abcb8 4833412N02Rik|AA409895 ATP-binding cassette, sub-family B (MDR/TAP), member 8 protein-coding common_peak1_286_1591_0.768354753787246_11.0208019974373_64.4538812111612 chr12 113423491 113425679 + 64.4538812111612 NA Intergenic (CAGCT)n|Simple_repeat|Simple_repeat -64980 NM_001009545 238405 Mm.442216 NM_001009545 ENSMUSG00000051804 Adam6b 4930523C11Rik a disintegrin and metallopeptidase domain 6B protein-coding common_peak2_363_2312_0.650020114456568_11.5005596078645_64.3143842378934 chr2 156719721 156723465 + 64.3143842378934 NA promoter-TSS (NR_040505) promoter-TSS (NR_040505) 314 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 discs, large homolog-associated protein 4 (Drosophila) protein-coding common_peak2_208_943_0.961102567162902_10.3631943329433_63.9740661153387 chr17 26502066 26504723 + 63.9740661153387 NA Intergenic Intergenic 5078 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak2_1549_18070_0.248116966895857_14.2654472062294_63.5788290284962 chr6 128782657 128804371 + 63.5788290284962 NA Intergenic Intergenic -4873 NM_001159904 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak1_994_9911_0.330126908585136_13.4400239264332_63.5530122839383 chr8 84659514 84665487 + 63.5530122839383 NA exon (NM_010499, exon 1 of 1) exon (NM_010499, exon 1 of 1) 352 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding common_peak2_694_6006_0.417661419144451_12.7612596580987_63.5489659575698 chr15 78524889 78532532 + 63.5489659575698 NA intron (NM_028331, intron 1 of 2) intron (NM_028331, intron 1 of 2) 941 NM_001204153 72709 Mm.34776 NM_028331 ENSMUSG00000022440 C1qtnf6 2810036M19Rik|CTRP6 C1q and tumor necrosis factor related protein 6 protein-coding common_peak1_117_1791_-0.975216205829422_10.3197468191429_63.5147335628808 chr6 128790702 128792497 + 63.5147335628808 NA Intergenic Intergenic -2958 NM_001159904 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak2_658_5569_0.432505257592027_12.6597142410234_63.5044615992554 chr10 77514855 77525999 + 63.5044615992554 NA Intergenic Intergenic -4614 NM_133998 108707 Mm.259547 NM_133998 ENSMUSG00000032977 Fam207a 1810008A18Rik|AI303072 family with sequence similarity 207, member A protein-coding common_peak1_791_7222_0.382908942332078_13.0098369262072_63.4699817409368 chr18 34853671 34858597 + 63.4699817409368 NA Intergenic Intergenic -5073 NM_007913 13653 Mm.181959 NM_007913 ENSMUSG00000038418 Egr1 A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr early growth response 1 protein-coding common_peak1_133_2001_-0.910070247499913_10.512191135086_63.3515398533241 chr13 23621285 23622566 + 63.3515398533241 NA promoter-TSS (NM_001177653) promoter-TSS (NM_001177653) 633 NM_015787 50709 Mm.170587 NM_015787 ENSMUSG00000051627 Hist1h1e H1-4|H1.4|H1e|H1f4|H1s-4|H1var2 histone cluster 1, H1e protein-coding common_peak1_605_4942_0.456423829805324_12.4993831060424_63.2677526754986 chr15 74929130 74935563 + 63.2677526754986 NA Intergenic RLTR6-int|LTR|ERV1 -22705 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak2_382_2510_0.62156398365692_11.6048283051_63.1525883708736 chr11 104548683 104551220 + 63.1525883708736 NA promoter-TSS (NM_010858) promoter-TSS (NM_010858) 669 NM_001285990 217232 Mm.89845 NM_145436 ENSMUSG00000020687 Cdc27 AI452358|APC3|BC023187 cell division cycle 27 protein-coding common_peak1_383_2521_0.6198721525093_11.6102886365829_63.0998269041732 chr11 104548479 104551196 + 63.0998269041732 NA promoter-TSS (NM_010858) promoter-TSS (NM_010858) 783 NM_001285990 217232 Mm.89845 NM_145436 ENSMUSG00000020687 Cdc27 AI452358|APC3|BC023187 cell division cycle 27 protein-coding common_peak2_979_9717_0.331762729044431_13.4123250816395_62.968700952423 chr1 64526758 64536827 + 62.968700952423 NA Intergenic RSINE1|SINE|B4 -1012 NM_133828 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding common_peak2_397_2668_0.601510514891809_11.6828388475879_62.4788499591311 chr2 57237239 57239794 + 62.4788499591311 NA 5' UTR (NM_010274, exon 1 of 17) 5' UTR (NM_010274, exon 1 of 17) 134 NM_010274 14571 Mm.3711 NM_010274 ENSMUSG00000026827 Gpd2 AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38 glycerol phosphate dehydrogenase 2, mitochondrial protein-coding common_peak2_162_614_1.13940184369477_9.83414352207399_62.3724012728901 chr13 33026535 33029163 + 62.3724012728901 NA intron (NM_011452, intron 1 of 6) intron (NM_011452, intron 1 of 6) 435 NM_011452 20706 Mm.45371 NM_011452 ENSMUSG00000021403 Serpinb9b 1600019A21Rik|R86|SPI-CI|Spi10|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9b protein-coding common_peak2_435_3064_0.563295499324205_11.8633191082402_62.0661157555366 chr8 35425140 35434686 + 62.0661157555366 NA Intergenic B1_Mus1|SINE|Alu 54172 NM_177741 244416 Mm.247126 NM_177741 ENSMUSG00000046794 Ppp1r3b 6430576E21|AW821953|GL|PTG protein phosphatase 1, regulatory (inhibitor) subunit 3B protein-coding common_peak2_214_1002_0.92372686652009_10.4319693238722_61.9951112939725 chr1 87648264 87652812 + 61.9951112939725 NA intron (NR_122078, intron 2 of 27) intron (NR_122078, intron 2 of 27) 30226 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_32_672_-1.81714274694944_8.4858913211356_61.9821241879406 chr3 107038354 107039006 + 61.9821241879406 NA promoter-TSS (NR_033498) promoter-TSS (NR_033498) -824 NR_033498 229694 Mm.347584 NM_173787 ENSMUSG00000056145 AI504432 A230102G19 expressed sequence AI504432 ncRNA common_peak2_38_749_-1.67780333577538_8.71184511749555_61.9167997952424 chr14 51088618 51090775 + 61.9167997952424 NA Intergenic Intergenic -1381 NM_001161731 11727 Mm.202665 NM_007447 ENSMUSG00000072115 Ang AI385586|Ang1|Rnase5|Rnase5a angiogenin, ribonuclease, RNase A family, 5 protein-coding common_peak2_226_1099_0.88665693857571_10.5466162776999_61.8263826453515 chr1 64796556 64800650 + 61.8263826453515 NA intron (NM_001039493, intron 7 of 7) intron (NM_001039493, intron 7 of 7) -60853 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_396_2665_0.598681144519006_11.6798016373485_61.7242596244166 chr2 57237269 57239798 + 61.7242596244166 NA 5' UTR (NM_010274, exon 1 of 17) 5' UTR (NM_010274, exon 1 of 17) 151 NM_010274 14571 Mm.3711 NM_010274 ENSMUSG00000026827 Gpd2 AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38 glycerol phosphate dehydrogenase 2, mitochondrial protein-coding common_peak1_573_4591_0.466684758841565_12.3982493060965_61.71815779763 chr19 5636379 5638702 + 61.71815779763 NA promoter-TSS (NM_009045) promoter-TSS (NM_009045) 50 NM_009045 19697 Mm.249966 NM_009045 ENSMUSG00000024927 Rela p65 v-rel reticuloendotheliosis viral oncogene homolog A (avian) protein-coding common_peak1_151_543_1.19273829570562_9.68383198910315_61.6479175477277 chr13 49370196 49372226 + 61.6479175477277 NA intron (NM_001039179, intron 2 of 6) intron (NM_001039179, intron 2 of 6) 29662 NM_001039180 76895 Mm.197387 NM_029791 ENSMUSG00000037933 Bicd2 - bicaudal D homolog 2 (Drosophila) protein-coding common_peak1_716_6309_0.401814740375949_12.8243316600579_61.4751185124646 chr17 35436975 35440686 + 61.4751185124646 NA promoter-TSS (NM_001201460) promoter-TSS (NM_001201460) -325 NM_010394 15018 Mm.431282 NM_010394 ENSMUSG00000060550 H2-Q7 H-2Q7|Ped|Q9|Qa-2|Qa-7|Qa7 histocompatibility 2, Q region locus 7 protein-coding common_peak2_894_8599_0.347529227824264_13.243885558389_61.451173434984 chr4 149694717 149703689 + 61.451173434984 NA promoter-TSS (NM_008840) promoter-TSS (NM_008840) -495 NM_001164049 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak2_734_6535_0.394924071796604_12.871654304044_61.3397479332001 chr1 138185270 138195081 + 61.3397479332001 NA Intergenic Intergenic -14870 NM_001268286 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak2_737_6573_0.393768867478039_12.8794401748193_61.3088098432807 chr15 27623340 27631465 + 61.3088098432807 NA intron (NM_001013792, intron 1 of 6) intron (NM_001013792, intron 1 of 6) 3291 NM_001013792 432940 Mm.309164 NM_001013792 ENSMUSG00000046034 Otulin C79097|Fam105b|m3Sapc|m7-1Sapc OTU deubiquitinase with linear linkage specificity protein-coding common_peak1_629_5253_0.437126572882825_12.577763771575_61.282852477115 chr9 62340480 62345093 + 61.282852477115 NA intron (NM_009672, intron 1 of 6) CpG 1443 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak2_575_4620_0.463757543637911_12.4058681459855_61.2627978027473 chr13 32964005 32971063 + 61.2627978027473 NA intron (NM_011454, intron 1 of 6) intron (NM_011454, intron 1 of 6) 2021 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak1_123_1851_-0.934961556153217_10.3873876051836_61.2201533813104 chr12 111164752 111166267 + 61.2201533813104 NA promoter-TSS (NM_011632) promoter-TSS (NM_011632) -861 NM_001286122 22031 Mm.27431 NM_011632 ENSMUSG00000021277 Traf3 AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn TNF receptor-associated factor 3 protein-coding common_peak1_183_770_1.02771068773754_10.1044423937838_61.1620356767276 chr7 19265172 19267628 + 61.1620356767276 NA intron (NR_104069, intron 1 of 10) MIR|SINE|MIR 5454 NM_001282021 22323 Mm.9684 NM_009499 ENSMUSG00000030403 Vasp - vasodilator-stimulated phosphoprotein protein-coding common_peak2_94_1470_-1.07411174097962_9.98552566076502_61.1341501981036 chr10 81167919 81170272 + 61.1341501981036 NA Intergenic Intergenic -1375 NM_021501 59004 Mm.34428 NM_021501 ENSMUSG00000004934 Pias4 PIASY|Pias-gamma|Piasg protein inhibitor of activated STAT 4 protein-coding common_peak2_716_6317_0.399986808498987_12.8252456259964_60.9585436055774 chr11 50209083 50214618 + 60.9585436055774 NA Intergenic Intergenic -1030 NM_011018 18412 Mm.40828 NM_011018 ENSMUSG00000015837 Sqstm1 A170|OSF-6|Osi|STAP|STONE14|p62 sequestosome 1 protein-coding common_peak2_819_7624_0.366251852091484_13.0796475482707_60.9554761633836 chr4 83320793 83330253 + 60.9554761633836 NA Intergenic Intergenic -1334 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak2_317_1902_0.69242874650873_11.2402742195284_60.9015097428152 chr16 78374942 78377493 + 60.9015097428152 NA intron (NM_001297747, intron 1 of 4) CpG 540 NR_002700 654432 Mm.458574 NR_002700 ENSMUSG00000044645 Gm7334 EG654432 B-cell translocation gene 3 pseudogene pseudo common_peak2_912_8851_0.341099546495188_13.2823375090486_60.8217585188002 chr15 76191534 76200774 + 60.8217585188002 NA promoter-TSS (NM_201394) promoter-TSS (NM_201394) -444 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_371_2425_0.619677508139793_11.5542025891904_60.6749503311196 chr1 120053489 120058997 + 60.6749503311196 NA intron (NM_001311077, intron 10 of 12) intron (NM_001311077, intron 10 of 12) 17537 NM_019432 170706 Mm.24750 NM_019432 ENSMUSG00000050777 Tmem37 AI173373|AW540203|Pr|Pr1 transmembrane protein 37 protein-coding common_peak2_1086_11247_0.304202005228385_13.6094818816867_60.6700544461532 chr1 134091951 134100591 + 60.6700544461532 NA Intergenic Intergenic -14971 NM_001284524 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding common_peak1_107_1636_-1.00140641726185_10.1761353978432_60.6581531792948 chr11 97123714 97125494 + 60.6581531792948 NA Intergenic Intergenic -9273 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding common_peak1_46_846_-1.52308707190618_8.96467462337911_60.5661566116553 chr11 119056361 119057227 + 60.5661566116553 NA Intergenic CpG -15881 NM_013926 30951 Mm.99953 NM_013926 ENSMUSG00000025578 Cbx8 Pc3 chromobox 8 protein-coding common_peak2_305_1795_0.70784596972595_11.1644946196041_60.4614477872309 chr4 145232712 145238491 + 60.4614477872309 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 11269 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_954_9424_0.330200189821726_13.3673769979543_60.4590514491765 chr15 78485882 78499317 + 60.4590514491765 NA intron (NM_008368, intron 1 of 9) intron (NM_008368, intron 1 of 9) 2467 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding common_peak2_265_1436_0.781668277391381_10.879678485153_60.4533179700997 chr1 177256802 177259437 + 60.4533179700997 NA Intergenic CpG -9352 NM_011785 23797 Mm.235194 NM_011785 ENSMUSG00000019699 Akt3 AI851531|D930002M15Rik|Nmf350 thymoma viral proto-oncogene 3 protein-coding common_peak2_796_7336_0.371453601239294_13.0267013704415_60.4479906323448 chr19 8988286 8999423 + 60.4479906323448 NA intron (NM_009643, intron 1 of 4) intron (NM_009643, intron 1 of 4) 4570 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_242_1240_0.833189199015807_10.6938819996383_60.4360899598497 chr2 18996765 18999037 + 60.4360899598497 NA promoter-TSS (NR_024323) promoter-TSS (NR_024323) 220 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding common_peak2_470_3458_0.525470852186007_12.0188747244659_60.169991567958 chr9 44492488 44499309 + 60.169991567958 NA Intergenic Intergenic -3238 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak1_245_1268_0.82271373856396_10.7208332231231_60.0879733266312 chr14 25606680 25609344 + 60.0879733266312 NA intron (NM_001310666, intron 6 of 23) CpG 4499 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak2_339_2119_0.655017920774643_11.3773575098379_59.9328651712516 chr6 114903325 114910221 + 59.9328651712516 NA intron (NM_177683, intron 1 of 4) MER95|LTR|ERV1 14979 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_243_1252_0.826573374097823_10.7044573863708_59.9023697931791 chr12 111757993 111760202 + 59.9023697931791 NA intron (NM_001025358, intron 1 of 14) CpG 229 NM_001025361 16593 Mm.278357 NM_008450 ENSMUSG00000021288 Klc1 AI874768|Kns2 kinesin light chain 1 protein-coding common_peak2_303_1781_0.707531826620393_11.1530475348321_59.8876322133074 chr11 86622778 86626079 + 59.8876322133074 NA intron (NM_029478, intron 7 of 11) intron (NM_029478, intron 7 of 11) -31643 NR_106195 102465902 NR_106195 ENSMUSG00000099324 Mir8115 Gm28012|mmu-mir-8115 microRNA 8115 ncRNA common_peak2_1230_13335_0.278695427311058_13.8423861026419_59.8629016469188 chr9 63712718 63728566 + 59.8629016469188 NA intron (NM_016769, intron 1 of 8) PB1D10|SINE|Alu 37352 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_30_634_-1.84393057692522_8.38864749319692_59.6363013569635 chr3 89230856 89231470 + 59.6363013569635 NA exon (NM_013605, exon 2 of 7) exon (NM_013605, exon 2 of 7) 2107 NM_013605 17829 Mm.16193 NM_013605 ENSMUSG00000042784 Muc1 CD227|EMA|Muc-1 mucin 1, transmembrane protein-coding common_peak2_568_4561_0.460658550125137_12.3857800063747_59.6122198895977 chr17 33997654 34003215 + 59.6122198895977 NA promoter-TSS (NM_001001892) promoter-TSS (NM_001001892) -101 NM_001001892 14972 Mm.422886 NM_001001892 ENSMUSG00000061232 H2-K1 H-2K|H-2K(d)|H2-K|K-f histocompatibility 2, K1, K region protein-coding common_peak2_212_1001_0.908627268805093_10.4229804275978_59.5912732768068 chr6 108685597 108689675 + 59.5912732768068 NA Intergenic Intergenic -26702 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_1148_12153_0.290601236536641_13.7144441948134_59.5549050222999 chr7 28371296 28384767 + 59.5549050222999 NA exon (NM_011756, exon 2 of 2) exon (NM_011756, exon 2 of 2) 1197 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding common_peak2_316_1905_0.684582554348909_11.2386236810844_59.4561115417984 chr2 155380852 155383427 + 59.4561115417984 NA intron (NM_178111, intron 1 of 3) CpG 283 NM_178111 68728 Mm.293605 NM_178111 ENSMUSG00000038375 Trp53inp2 1110029F20Rik|Tp53inp2 transformation related protein 53 inducible nuclear protein 2 protein-coding common_peak2_66_1094_-1.26617145433881_9.46362942731913_59.2869829143155 chr13 23696974 23699062 + 59.2869829143155 NA TTS (NM_178208) TTS (NM_178208) 440 NM_178208 319155 Mm.261662 NM_178208 ENSMUSG00000060678 Hist1h4c - histone cluster 1, H4c protein-coding common_peak2_1024_10409_0.311971990635286_13.5016684435044_59.2364456656186 chr12 25185918 25193032 + 59.2364456656186 NA Intergenic Intergenic 60301 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_630_5298_0.42762935155505_12.5853190878209_58.9775903913064 chr4 145219353 145224475 + 58.9775903913064 NA intron (NM_011610, intron 8 of 9) intron (NM_011610, intron 8 of 9) 24956 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_753_6812_0.380206049345713_12.9241775161009_58.9566806034358 chr11 16994525 17009679 + 58.9566806034358 NA intron (NM_019549, intron 1 of 9) L1_Mus1|LINE|L1 6616 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding common_peak2_542_4273_0.471970638969834_12.2973565121447_58.864778648044 chr1 182515290 182521894 + 58.864778648044 NA Intergenic MER20|DNA|hAT-Charlie -1109 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_331_2053_0.658510025222867_11.3334754789296_58.7748684474272 chr11 115171161 115176445 + 58.7748684474272 NA intron (NM_012030, intron 1 of 5) intron (NM_012030, intron 1 of 5) 10462 NM_012030 26941 Mm.27842 NM_012030 ENSMUSG00000020733 Slc9a3r1 EBP-50|NHE-RF|NHERF-1|NHERF1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 protein-coding common_peak1_729_6513_0.387708920054401_12.8631824644231_58.767987772812 chr15 27623823 27631428 + 58.767987772812 NA intron (NM_001013792, intron 1 of 6) intron (NM_001013792, intron 1 of 6) 3068 NM_001013792 432940 Mm.309164 NM_001013792 ENSMUSG00000046034 Otulin C79097|Fam105b|m3Sapc|m7-1Sapc OTU deubiquitinase with linear linkage specificity protein-coding common_peak1_154_577_1.13986210911195_9.74485673705665_58.7225663200731 chr4 117288311 117289762 + 58.7225663200731 NA exon (NM_001310730, exon 2 of 11) exon (NM_001310730, exon 2 of 11) 419 NM_001310730 66743 Mm.318331 NM_025739 ENSMUSG00000028677 Rnf220 4732477A13|4931406I20Rik|5730503K05Rik|AV302541 ring finger protein 220 protein-coding common_peak1_237_1210_0.831701531731669_10.6578339155602_58.7113843239763 chr2 18997056 18999025 + 58.7113843239763 NA promoter-TSS (NR_024323) promoter-TSS (NR_024323) 81 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding common_peak1_299_1755_0.705297201127022_11.1307257300989_58.5951741772152 chr11 86622781 86625779 + 58.5951741772152 NA intron (NM_029478, intron 7 of 11) intron (NM_029478, intron 7 of 11) -31791 NR_106195 102465902 NR_106195 ENSMUSG00000099324 Mir8115 Gm28012|mmu-mir-8115 microRNA 8115 ncRNA common_peak2_702_6180_0.396719286522487_12.7919841929673_58.5709518802339 chr14 55941284 55948425 + 58.5709518802339 NA promoter-TSS (NM_010780) promoter-TSS (NM_010780) -193 NM_010780 17228 Mm.1252 NM_010780 ENSMUSG00000022225 Cma1 MMCP-5|Mcp-5|Mcp5|Mcpt5 chymase 1, mast cell protein-coding common_peak2_511_3928_0.489368366598262_12.1846306357578_58.5602233279304 chr10 93308011 93311762 + 58.5602233279304 NA intron (NM_013508, intron 1 of 4) intron (NM_013508, intron 1 of 4) 1273 NM_013508 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak2_611_5081_0.433849255600098_12.5281052878534_58.3704260634438 chr16 30183117 30189588 + 58.3704260634438 NA Intergenic Intergenic 81180 NM_027904 71756 Mm.290614 NM_027904 ENSMUSG00000023176 Cpn2 1300018K11Rik carboxypeptidase N, polypeptide 2 protein-coding common_peak1_398_2720_0.578113587565964_11.6989780350327_58.3469299511219 chr17 30003672 30006114 + 58.3469299511219 NA promoter-TSS (NM_148926) promoter-TSS (NM_148926) -194 NM_148926 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding common_peak2_410_2844_0.566259135494201_11.757342504941_58.3371177772871 chr17 30003557 30006670 + 58.3371177772871 NA promoter-TSS (NM_148926) promoter-TSS (NM_148926) 26 NM_148926 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding common_peak1_839_7930_0.352130096357767_13.129352116057_58.2913257700811 chr7 31148242 31153773 + 58.2913257700811 NA promoter-TSS (NM_027898) promoter-TSS (NM_027898) 43 NM_027898 52857 Mm.27366 NM_027898 ENSMUSG00000001248 Gramd1a 1300003M23Rik|AI415002|AW547240|D7Bwg0611e GRAM domain containing 1A protein-coding common_peak1_426_3012_0.55107060271798_11.8325202589535_58.1997460057338 chr10 21203315 21206902 + 58.1997460057338 NA Intergenic Intergenic -44124 NM_010848 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding common_peak1_233_1181_0.83667595676997_10.6253522985625_58.1358163450691 chr13 46668756 46670361 + 58.1358163450691 NA promoter-TSS (NM_001033192) promoter-TSS (NM_001033192) 36 NM_001033192 97863 Mm.275934 NM_001033192 ENSMUSG00000069237 Fam8a1 C78339 family with sequence similarity 8, member A1 protein-coding common_peak1_333_4718_-0.530906539262528_11.9388121865056_57.9626074242618 chr6 128786678 128790657 + 57.9626074242618 NA promoter-TSS (NM_008527) promoter-TSS (NM_008527) -26 NM_001159904 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak2_232_1174_0.837666519421486_10.6172783011631_57.9565183164131 chr19 24998340 25001259 + 57.9565183164131 NA intron (NM_028785, intron 1 of 47) CpG 270 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak2_189_833_0.971178528016905_10.1894928374531_57.9340347237307 chr12 84316174 84318047 + 57.9340347237307 NA non-coding (NR_045615, exon 1 of 10) non-coding (NR_045615, exon 1 of 10) 251 NM_001252583 52708 Mm.255150 NM_144833 ENSMUSG00000042472 Zfp410 Apa1|D12Ertd748e|Znf410 zinc finger protein 410 protein-coding common_peak1_21_507_-2.12888694407821_7.92424121473306_57.7928263579856 chr16 55948420 55948935 + 57.7928263579856 NA Intergenic MurERV4_19-int|LTR|ERVK -13829 NM_001159365 74201 Mm.178427 NM_028815 ENSMUSG00000022604 Cep97 2810403B08Rik|4932439K18Rik|AA437768|E130116N02Rik|Lrriq2 centrosomal protein 97 protein-coding common_peak2_160_623_1.09659469449673_9.83369956611061_57.697415426457 chr4 117288429 117290073 + 57.697415426457 NA exon (NM_001310730, exon 1 of 11) exon (NM_001310730, exon 1 of 11) 204 NM_001310730 66743 Mm.318331 NM_025739 ENSMUSG00000028677 Rnf220 4732477A13|4931406I20Rik|5730503K05Rik|AV302541 ring finger protein 220 protein-coding common_peak2_695_6108_0.395914239144675_12.7746776446526_57.6585870518301 chr19 44280209 44285515 + 57.6585870518301 NA Intergenic Intergenic -10814 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_700_6172_0.393546083010634_12.7885291175283_57.5271591628184 chr2 13407463 13416186 + 57.5271591628184 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 80052 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak2_483_3634_0.502051818201203_12.0787655579076_57.2629302453732 chr11 69087610 69090327 + 57.2629302453732 NA intron (NM_009497, intron 1 of 4) CpG 440 NM_009497 22318 Mm.28643 NM_009497 ENSMUSG00000020894 Vamp2 Syb-2|Syb2|sybII vesicle-associated membrane protein 2 protein-coding common_peak1_642_5469_0.415146413615769_12.6248983244878_57.162349803179 chr5 112297476 112301925 + 57.162349803179 NA intron (NM_009419, intron 1 of 6) intron (NM_009419, intron 1 of 6) 22993 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak1_24_543_-2.00144764911396_8.08673901669336_57.0184193201399 chr6 113075860 113076375 + 57.0184193201399 NA intron (NR_027009, intron 1 of 1) intron (NR_027009, intron 1 of 1) 1127 NR_027010 14910 Mm.280950 NR_027008 ENSMUSG00000086429 Gt(ROSA)26Sor AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26|Thumpd3as1 gene trap ROSA 26, Philippe Soriano ncRNA common_peak1_18_464_-2.2607227025985_7.73072555469614_56.9918935997414 chr9 21131615 21132068 + 56.9918935997414 NA promoter-TSS (NM_018793) promoter-TSS (NM_018793) -566 NM_001205312 54721 Mm.20249 NM_018793 ENSMUSG00000032175 Tyk2 JTK1 tyrosine kinase 2 protein-coding common_peak2_602_4995_0.432254970848334_12.5026852470321_56.9166302957177 chr9 69449284 69459978 + 56.9166302957177 NA intron (NM_007585, intron 1 of 12) intron (NM_007585, intron 1 of 12) 948 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding common_peak1_580_4738_0.442675032801219_12.4317044620332_56.85628171546 chr11 74567071 74573757 + 56.85628171546 NA intron (NM_001015046, intron 1 of 24) intron (NM_001015046, intron 1 of 24) 19744 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_508_3916_0.483381998126516_12.177224412014_56.8285668847728 chr10 93308141 93311666 + 56.8285668847728 NA intron (NM_013508, intron 1 of 4) intron (NM_013508, intron 1 of 4) 1256 NM_013508 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak2_385_2604_0.582349946466742_11.6382426303992_56.755016907708 chr2 25532342 25537203 + 56.755016907708 NA intron (NM_009422, intron 4 of 10) intron (NM_009422, intron 4 of 10) 12168 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding common_peak2_348_2237_0.623105976287874_11.4395473091203_56.6647060332127 chr9 107288267 107290747 + 56.6647060332127 NA promoter-TSS (NM_001316691) promoter-TSS (NM_001316691) -111 NM_001316691 102626 Mm.222612 NM_178907 ENSMUSG00000032577 Mapkapk3 3PK|AI874665|MAPKAP-K3|MAPKAP3|MK-3|MK3|MapkKapk3 mitogen-activated protein kinase-activated protein kinase 3 protein-coding common_peak2_526_4122_0.470935701440668_12.2449465966084_56.5659046186083 chr13 42048425 42054092 + 56.5659046186083 NA promoter-TSS (NM_007772) promoter-TSS (NM_007772) -763 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak2_238_1234_0.810809187620539_10.6756999202823_56.493812034534 chr13 46668419 46670567 + 56.493812034534 NA promoter-TSS (NM_001033192) promoter-TSS (NM_001033192) -29 NM_001033192 97863 Mm.275934 NM_001033192 ENSMUSG00000069237 Fam8a1 C78339 family with sequence similarity 8, member A1 protein-coding common_peak2_131_436_1.25905510053299_9.4010170197671_56.4766971110967 chr17 31066183 31068398 + 56.4766971110967 NA intron (NM_009593, intron 2 of 14) intron (NM_009593, intron 2 of 14) 9596 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak2_873_8414_0.336885744079703_13.2071904282572_56.3257520108898 chr17 6419924 6431947 + 56.3257520108898 NA Intergenic B1_Mur1|SINE|Alu -4177 NM_009342 21648 Mm.1948 NM_009342 ENSMUSG00000096255 Dynlt1b AGS2|Dynlt1|Tctex-1|Tctex1 dynein light chain Tctex-type 1B protein-coding common_peak2_564_4560_0.448490630192964_12.3793797699542_56.2790592891576 chr4 102567645 102574978 + 56.2790592891576 NA intron (NM_019840, intron 6 of 14) intron (NM_019840, intron 6 of 14) 1251 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak2_268_1496_0.742500615510592_10.9191088138137_56.1566966576108 chr1 88276261 88278708 + 56.1566966576108 NA promoter-TSS (NM_172505) promoter-TSS (NM_172505) 73 NM_172505 212427 Mm.384762 NM_172505 A730008H23Rik mFleg1 RIKEN cDNA A730008H23 gene protein-coding common_peak2_132_1925_-0.867491675181098_10.4776461502529_56.1166567842884 chr4 141558090 141560324 + 56.1166567842884 NA Intergenic Intergenic 13045 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak2_382_2583_0.580219942234494_11.6255003258112_55.8625893722773 chr1 55085441 55089503 + 55.8625893722773 NA promoter-TSS (NM_008303) promoter-TSS (NM_008303) 460 NM_010477 15510 Mm.1777 NM_010477 ENSMUSG00000025980 Hspd1 60kDa|Hsp60 heat shock protein 1 (chaperonin) protein-coding common_peak2_144_2080_-0.826292348344445_10.6099150755631_55.8080152358839 chr15 79657853 79659964 + 55.8080152358839 NA promoter-TSS (NM_028634) promoter-TSS (NM_028634) 48 NM_029407 75729 Mm.78946 NM_029407 ENSMUSG00000042564 Fam227a 4933432B09Rik family with sequence similarity 227, member A protein-coding common_peak2_443_3220_0.523849844354592_11.9152178675601_55.667346347096 chr5 31633358 31638701 + 55.667346347096 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 22078 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_525_4122_0.467574584573748_12.2432660381749_55.6564594369113 chr1 74235778 74241672 + 55.6564594369113 NA intron (NM_029711, intron 1 of 9) ID_B1|SINE|B4 2175 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak1_58_969_-1.31631453203267_9.26368367105816_55.6184891060811 chr9 44234282 44235060 + 55.6184891060811 NA promoter-TSS (NM_007619) promoter-TSS (NM_007619) -625 NM_007619 12402 Mm.266871 NM_007619 ENSMUSG00000034342 Cbl 4732447J05Rik|Cbl-2|c-Cbl|cbl Casitas B-lineage lymphoma protein-coding common_peak2_233_1199_0.81487158645162_10.6362544837217_55.5785172937957 chr17 21488368 21490946 + 55.5785172937957 NA intron (NM_013843, intron 1 of 4) intron (NM_013843, intron 1 of 4) 669 NM_013843 24132 Mm.42140 NM_013843 ENSMUSG00000057409 Zfp53 D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8 zinc finger protein 53 protein-coding common_peak2_848_8098_0.340748534430952_13.1539023383806_55.5737809375096 chr6 122288365 122299070 + 55.5737809375096 NA Intergenic Intergenic -10884 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak1_225_1133_0.834926884416531_10.5646683671505_55.547500271775 chr19 24998763 25001260 + 55.547500271775 NA intron (NM_028785, intron 1 of 47) intron (NM_028785, intron 1 of 47) 482 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding unique_peak1_42_19_3.72379907536659_6.18382763257066_55.2367126269356 chr2 34359872 34360709 + 55.2367126269356 NA intron (NM_001290576, intron 2 of 7) intron (NM_001290576, intron 2 of 7) 11755 NM_001290576 18516 Mm.239941 NM_016768 ENSMUSG00000038718 Pbx3 - pre B cell leukemia homeobox 3 protein-coding common_peak2_333_2105_0.633069195848599_11.35682431895_55.2294293480159 chr7 75699729 75704359 + 55.2294293480159 NA intron (NM_029332, intron 16 of 36) intron (NM_029332, intron 16 of 36) -146294 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_193_880_0.928952465629351_10.2474744417351_55.1539548276789 chr9 52047520 52049312 + 55.1539548276789 NA 5' UTR (NM_009041, exon 1 of 14) 5' UTR (NM_009041, exon 1 of 14) 289 NR_023357 629557 Mm.422775 NR_023357 Gm6981 EG629557 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak2_22_508_-2.05306104198219_7.9649913250846_55.0695261238645 chr17 33915384 33916847 + 55.0695261238645 NA promoter-TSS (NM_020625) promoter-TSS (NM_020625) -61 NM_020625 81630 Mm.482096 NM_020625 ENSMUSG00000051390 Zbtb22 1110008J20Rik|AI265210|AI415166|Bing1|Zfp297 zinc finger and BTB domain containing 22 protein-coding common_peak1_32_635_-1.73556300762348_8.44510145147262_54.9649760321973 chr9 56508695 56509327 + 54.9649760321973 NA Intergenic Intergenic 90165 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_32_634_-1.73329283399865_8.4439663646602_54.778231506095 chr10 53771702 53772185 + 54.778231506095 NA Intergenic Intergenic -21034 NM_001081428 75906 Mm.436785 NM_001081428 ENSMUSG00000019856 Fam184a 3110012E06Rik|4930438C08Rik|4930589M24Rik family with sequence similarity 184, member A protein-coding common_peak1_36_685_-1.6422811149614_8.60092420869211_54.747243144055 chr6 8647402 8648100 + 54.747243144055 NA intron (NM_001252266, intron 10 of 11) intron (NM_001252266, intron 10 of 11) 110707 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak2_935_9277_0.317316768470377_13.338256515085_54.726624188408 chr11 70645855 70657332 + 54.726624188408 NA TTS (NM_011072) TTS (NM_011072) 3057 NM_011072 18643 Mm.2647 NM_011072 ENSMUSG00000018293 Pfn1 Pfn profilin 1 protein-coding common_peak2_1039_10712_0.296288845771098_13.5352193421928_54.6966988603563 chr5 37044038 37054834 + 54.6966988603563 NA Intergenic Intergenic -1421 NM_178394 76071 Mm.85280 NM_178394 ENSMUSG00000063646 Jakmip1 5830437M04Rik|C330021K24Rik|Gababrbp|Marlin-1 janus kinase and microtubule interacting protein 1 protein-coding common_peak2_618_5218_0.415598185181288_12.5573567792112_54.6548044015606 chr19 41337885 41347076 + 54.6548044015606 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 42590 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_182_2573_-0.721142371020445_10.9692251527105_54.6470012181098 chr10 41809458 41811309 + 54.6470012181098 NA promoter-TSS (NM_026643) promoter-TSS (NM_026643) -191 NM_001162908 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding common_peak2_473_3557_0.495995123185796_12.0448483568601_54.6187342692129 chr9 7762651 7766317 + 54.6187342692129 NA intron (NM_133739, intron 1 of 4) CpG 407 NM_133739 71929 Mm.283293 NM_133739 ENSMUSG00000050912 Tmem123 2310075C12Rik transmembrane protein 123 protein-coding common_peak1_236_1231_0.7994470665717_10.6665100739808_54.6068610897304 chr12 111758221 111760190 + 54.6068610897304 NA intron (NM_001025358, intron 1 of 14) CpG 337 NM_001025361 16593 Mm.278357 NM_008450 ENSMUSG00000021288 Klc1 AI874768|Kns2 kinesin light chain 1 protein-coding common_peak1_295_4128_-0.551956118405698_11.7355986439733_54.4544569323329 chr17 25222454 25224735 + 54.4544569323329 NA intron (NM_028789, intron 1 of 4) intron (NM_028789, intron 1 of 4) 1012 NM_028789 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding common_peak1_221_1108_0.835486828389342_10.5327870643564_54.3973326483967 chr17 21488743 21490662 + 54.3973326483967 NA intron (NM_013843, intron 1 of 4) intron (NM_013843, intron 1 of 4) 714 NM_013843 24132 Mm.42140 NM_013843 ENSMUSG00000057409 Zfp53 D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8 zinc finger protein 53 protein-coding common_peak2_571_4668_0.436517095712951_12.4071564210987_54.3784043846421 chr7 25685733 25690652 + 54.3784043846421 NA exon (NM_011577, exon 1 of 7) exon (NM_011577, exon 1 of 7) 1190 NM_011577 21803 Mm.248380 NM_011577 ENSMUSG00000002603 Tgfb1 TGF-beta1|TGFbeta1|Tgfb|Tgfb-1 transforming growth factor, beta 1 protein-coding common_peak1_97_1456_-1.00529661396747_10.0061368550808_54.3703728067085 chr9 121704458 121706256 + 54.3703728067085 NA promoter-TSS (NM_178677) promoter-TSS (NM_178677) -328 NM_178677 215474 Mm.31421 NM_178677 ENSMUSG00000061536 Sec22c 4932412K21|5930407I15Rik|C530046H07|Sec22l3 SEC22 homolog C, vesicle trafficking protein protein-coding common_peak2_215_1060_0.850835559483897_10.4766267206567_54.3092873977674 chr12 79351385 79354545 + 54.3092873977674 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 55614 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_496_3815_0.478850199106978_12.137270555559_54.2565854065542 chr2 167773110 167779315 + 54.2565854065542 NA Intergenic Intergenic 85035 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak2_59_972_-1.29102725099705_9.28078236928259_54.1700192447068 chr19 12805197 12807564 + 54.1700192447068 NA intron (NM_134152, intron 2 of 8) intron (NM_134152, intron 2 of 8) 7771 NM_134152 107321 Mm.313136 NM_134152 ENSMUSG00000024696 Lpxn 4933402K05Rik|A530083L21Rik|AV278559|LDPL leupaxin protein-coding common_peak1_599_5000_0.421985752141163_12.4989937657782_54.1285966097783 chr16 30183904 30189513 + 54.1285966097783 NA Intergenic Intergenic 80824 NM_027904 71756 Mm.290614 NM_027904 ENSMUSG00000023176 Cpn2 1300018K11Rik carboxypeptidase N, polypeptide 2 protein-coding common_peak2_263_1469_0.735556441496222_10.8893786604718_54.0017414575626 chr8 119422098 119426263 + 54.0017414575626 NA Intergenic Intergenic -12982 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak2_281_1630_0.702336848053774_11.0227094907388_53.9692684803681 chr7 66373092 66377924 + 53.9692684803681 NA intron (NM_146191, intron 2 of 33) Tigger5b|DNA|TcMar-Tigger 6216 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_55_918_-1.33074399008475_9.17854905624666_53.7941911728729 chr11 69990385 69991520 + 53.7941911728729 NA promoter-TSS (NM_019749) promoter-TSS (NM_019749) -418 NM_019749 56486 Mm.272460 NM_019749 ENSMUSG00000018567 Gabarap - gamma-aminobutyric acid receptor associated protein protein-coding common_peak1_112_331_1.38048006682548_9.06527946475966_53.7881674410813 chr15 85336102 85337409 + 53.7881674410813 NA intron (NM_016843, intron 1 of 11) CpG 374 NM_016843 54138 Mm.248906 NM_016843 ENSMUSG00000016541 Atxn10 AI325283|C77170|E46|Sca10|TEG-169|Tex169 ataxin 10 protein-coding common_peak1_132_455_1.21101029849762_9.43839516341355_53.6730309235279 chr6 86568934 86570976 + 53.6730309235279 NA Intergenic PB1D10|SINE|Alu 42554 NR_037961 72012 Mm.349174 NR_037960 ENSMUSG00000097048 1600020E01Rik - RIKEN cDNA 1600020E01 gene ncRNA common_peak1_255_1402_0.748403214250693_10.8285009007452_53.5681624583366 chr1 88276210 88278094 + 53.5681624583366 NA intron (NM_172505, intron 2 of 4) intron (NM_172505, intron 2 of 4) 405 NM_172505 212427 Mm.384762 NM_172505 A730008H23Rik mFleg1 RIKEN cDNA A730008H23 gene protein-coding common_peak1_90_1360_-1.03810630878395_9.89139819711202_53.5314250944197 chr3 103384593 103386222 + 53.5314250944197 NA Intergenic Intergenic 106114 NM_001079830 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding common_peak2_787_7342_0.350177354363138_13.0172425618164_53.3759988773797 chr5 123125092 123135118 + 53.3759988773797 NA intron (NM_175092, intron 2 of 4) intron (NM_175092, intron 2 of 4) 2524 NM_175092 23912 Mm.253876 NM_175092 ENSMUSG00000029449 Rhof AI845056|AV026554|Arhf|Ifld1|Rif ras homolog family member F (in filopodia) protein-coding common_peak1_566_4625_0.434328641622157_12.3927138714473_53.2863570460967 chr12 101025213 101029721 + 53.2863570460967 NA intron (NM_026681, intron 2 of 29) intron (NM_026681, intron 2 of 29) 1516 NM_026681 68339 Mm.156217 NM_026681 ENSMUSG00000021182 Ccdc88c 0610010D24Rik|AV000935|AW324073|Daple|mKIAA1509 coiled-coil domain containing 88C protein-coding common_peak2_434_3152_0.518393962860838_11.8817064361138_53.2691544583244 chr8 46779850 46786378 + 53.2691544583244 NA intron (NM_008391, intron 1 of 8) intron (NM_008391, intron 1 of 8) 43369 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_66_101_2.15811835817823_7.75148452106061_53.2437676962467 chr4 3874668 3875801 + 53.2437676962467 NA Intergenic CpG -3129 NM_020021 17451 Mm.459300 NM_020021 ENSMUSG00000078365 Mos c-mos Moloney sarcoma oncogene protein-coding common_peak1_44_776_-1.47559215084308_8.86397471298617_53.2125989172864 chr7 51861677 51862505 + 53.2125989172864 NA exon (NM_001115087, exon 1 of 1) exon (NM_001115087, exon 1 of 1) 176 NM_001115087 100040608 Mm.322643 NM_001115087 ENSMUSG00000092118 Fancf A730016A17 Fanconi anemia, complementation group F protein-coding common_peak2_515_4042_0.461875820508251_12.2121483985258_53.207130493455 chr7 66141868 66152821 + 53.207130493455 NA intron (NM_001081163, intron 2 of 2) intron (NM_001081163, intron 2 of 2) 37829 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_820_7775_0.340117738190862_13.0948713727012_53.1334432627659 chr7 63935658 63939050 + 53.1334432627659 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) 1561 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak2_349_2283_0.598816677225367_11.4567552739755_52.9734286206129 chr9 107294465 107298384 + 52.9734286206129 NA promoter-TSS (NM_009895) promoter-TSS (NM_009895) -265 NM_009895 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak2_365_2444_0.579647528547016_11.5454425141131_52.7846490362734 chr11 70916440 70921822 + 52.7846490362734 NA intron (NM_001291142, intron 8 of 16) intron (NM_001291142, intron 8 of 16) 50842 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding common_peak1_179_789_0.953694416872878_10.1025560515009_52.6287985321028 chr12 84316472 84317898 + 52.6287985321028 NA 5' UTR (NM_001252582, exon 1 of 8) 5' UTR (NM_001252582, exon 1 of 8) 326 NM_001252583 52708 Mm.255150 NM_144833 ENSMUSG00000042472 Zfp410 Apa1|D12Ertd748e|Znf410 zinc finger protein 410 protein-coding common_peak1_88_204_1.65353826925874_8.50624923413482_52.5634373918991 chr10 128501682 128502893 + 52.5634373918991 NA intron (NR_131150, intron 2 of 2) MTC-int|LTR|ERVL-MaLR 3040 NR_131151 654440 Mm.441262 NR_131150 ENSMUSG00000097353 A430046D13Rik - Riken cDNA A430046D13 gene ncRNA common_peak1_274_3808_-0.565799967299103_11.6122965889138_52.5338692362277 chr18 39140012 39142846 + 52.5338692362277 NA intron (NM_175164, intron 10 of 22) intron (NM_175164, intron 10 of 22) 148284 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_355_2347_0.58902629802685_11.4917298421235_52.5246477468314 chr19 53431378 53434019 + 52.5246477468314 NA Intergenic MIR|SINE|MIR 32098 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak2_951_9540_0.306984534935895_13.3734170363308_52.5027271611421 chr1 165839617 165850994 + 52.5027271611421 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 56624 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak2_845_8116_0.331281532743294_13.1523716645473_52.4652098360242 chr11 117316752 117329408 + 52.4652098360242 NA intron (NM_001113487, intron 2 of 10) intron (NM_001113487, intron 2 of 10) -8635 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_785_7333_0.347449538474846_13.0141093199491_52.4458717238326 chr8 69937795 69942397 + 52.4458717238326 NA intron (NM_001286450, intron 2 of 12) intron (NM_001286450, intron 2 of 12) 34287 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak2_397_2776_0.544282643214929_11.7114527834263_52.2379961341859 chr5 24840871 24844160 + 52.2379961341859 NA promoter-TSS (NM_053075) promoter-TSS (NM_053075) -154 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak1_24_519_-1.93635262089207_8.05419150258242_52.170775922653 chrX 101429599 101430133 + 52.170775922653 NA intron (NM_001252518, intron 1 of 11) CpG 215 NM_001252518 53610 Mm.280069 NM_023144 ENSMUSG00000031311 Nono AA407051|AV149256|NRB54|P54NRB|nonA non-POU-domain-containing, octamer binding protein protein-coding common_peak2_115_1669_-0.903744450476134_10.2537601621233_52.1501382949118 chr6 136489915 136494716 + 52.1501382949118 NA Intergenic MLT1B|LTR|ERVL-MaLR -26536 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak2_263_1484_0.720909665531821_10.896702048454_52.148904111543 chr1 135145881 135148746 + 52.148904111543 NA intron (NM_026823, intron 1 of 6) CpG 479 NM_026823 68724 Mm.174998 NM_026823 ENSMUSG00000026426 Arl8a 1110033P22Rik|Arl10b|gie2 ADP-ribosylation factor-like 8A protein-coding common_peak2_120_386_1.28037708849104_9.23637830038993_52.1369733179488 chr9 90236920 90238698 + 52.1369733179488 NA intron (NM_194334, intron 3 of 12) intron (NM_194334, intron 3 of 12) 32960 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak2_337_2174_0.607626474092314_11.3906129226696_52.0994885383655 chr7 122969166 122971645 + 52.0994885383655 NA promoter-TSS (NM_175023) promoter-TSS (NM_175023) 54 NR_045614 73951 Mm.389936 NR_045614 4930413G21Rik - RIKEN cDNA 4930413G21 gene ncRNA common_peak1_113_344_1.340658479071_9.10078179120103_52.0942639358962 chr2 31759271 31760807 + 52.0942639358962 NA promoter-TSS (NM_001283045) promoter-TSS (NM_001283045) 100 NM_009594 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak2_116_362_1.31325222776539_9.16045185187845_52.0434424425666 chr19 23273158 23274501 + 52.0434424425666 NA promoter-TSS (NM_153808) promoter-TSS (NM_153808) 68 NM_153808 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding common_peak1_332_2126_0.613448365557305_11.3613285007393_52.0399578879934 chr2 128379381 128383132 + 52.0399578879934 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 48095 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_248_1353_0.750628361746635_10.7783262044483_52.0389268201924 chr7 100852948 100857574 + 52.0389268201924 NA intron (NM_177073, intron 1 of 10) intron (NM_177073, intron 1 of 10) 8152 NM_177073 320100 Mm.40336 NM_177073 ENSMUSG00000008318 Relt E430021K24Rik|Tnfrsf19l RELT tumor necrosis factor receptor protein-coding common_peak1_640_5525_0.394938821774126_12.6294892576996_51.9184480360475 chr9 35115700 35120736 + 51.9184480360475 NA non-coding (NR_029475, exon 2 of 6) non-coding (NR_029475, exon 2 of 6) -1408 NM_009178 20443 Mm.275973 NM_009178 ENSMUSG00000032038 St3gal4 Siat4c ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding common_peak2_158_640_1.03569573497766_9.84202841410757_51.8365457428921 chr6 49073250 49074707 + 51.8365457428921 NA exon (NM_029353, exon 1 of 4) exon (NM_029353, exon 1 of 4) 183 NM_029353 75593 Mm.439947 NM_029353 ENSMUSG00000029815 Malsu1 2410003K15Rik|Matsu1 mitochondrial assembly of ribosomal large subunit 1 protein-coding common_peak2_88_1321_-1.0354880927435_9.85076241513594_51.8194519462239 chr1 192605919 192608471 + 51.8194519462239 NA intron (NM_144881, intron 9 of 11) intron (NM_144881, intron 9 of 11) 164024 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak2_238_1269_0.770491732433049_10.6958586478761_51.7597145044672 chr2 166593435 166600992 + 51.7597145044672 NA intron (NM_177782, intron 14 of 39) intron (NM_177782, intron 14 of 39) -75505 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_406_2875_0.533317103899966_11.7565065123893_51.7019686463416 chr11 5519816 5522607 + 51.7019686463416 NA intron (NM_001271730, intron 1 of 5) CpG 570 NM_001271730 22433 Mm.469937 NM_013842 ENSMUSG00000020484 Xbp1 D11Ertd39e|TREB-5|TREB5|XBP-1 X-box binding protein 1 protein-coding common_peak1_481_3682_0.475798124541265_12.0845647441704_51.676085543064 chr15 60110454 60115476 + 51.676085543064 NA Intergenic B1_Mus2|SINE|Alu -96347 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_74_1143_-1.12972162848872_9.59501052253403_51.6296822713473 chr6 48707809 48708853 + 51.6296822713473 NA promoter-TSS (NM_153175) promoter-TSS (NM_153175) -87 NM_153175 231931 Mm.321047 NM_153175 ENSMUSG00000047867 Gimap6 4833419H03Rik|Ian6|mFLJ00102 GTPase, IMAP family member 6 protein-coding common_peak1_56_916_-1.29627920404488_9.19263832157261_51.5563320823912 chr13 113119739 113120782 + 51.5563320823912 NA Intergenic Intergenic -15816 NR_131045 76720 Mm.54263 NR_131045 1700084D21Rik - RIKEN cDNA 1700084D21 gene ncRNA common_peak2_232_3215_-0.614940130305079_11.3435816260264_51.4729437953677 chr10 81504054 81511164 + 51.4729437953677 NA intron (NM_010304, intron 6 of 6) B1_Mus1|SINE|Alu -7472 NM_010102 13611 Mm.33065 NM_010102 ENSMUSG00000044199 S1pr4 Edg6|Lpc1|S1p4 sphingosine-1-phosphate receptor 4 protein-coding common_peak2_180_804_0.936362342474382_10.1210261442392_51.4611229517052 chr18 80553997 80556368 + 51.4611229517052 NA Intergenic Intergenic -10636 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_110_329_1.35759595311888_9.04512019080526_51.4295591932847 chr15 85336086 85337255 + 51.4295591932847 NA intron (NM_016843, intron 1 of 11) CpG 289 NM_016843 54138 Mm.248906 NM_016843 ENSMUSG00000016541 Atxn10 AI325283|C77170|E46|Sca10|TEG-169|Tex169 ataxin 10 protein-coding common_peak1_433_3163_0.50929674071334_11.8821822548295_51.4254527953221 chr5 21185326 21189875 + 51.4254527953221 NA intron (NM_175437, intron 1 of 30) intron (NM_175437, intron 1 of 30) 1333 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak2_912_9032_0.311897788850366_13.296938387871_51.4210515265341 chr13 33066212 33080128 + 51.4210515265341 NA Intergenic Intergenic -10933 NM_173052 282663 Mm.314490 NM_173052 ENSMUSG00000051029 Serpinb1b 6330533H24Rik|EIB|Serpin1b1|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1b protein-coding common_peak1_148_572_1.08253367335072_9.70365816543226_51.419028676575 chr14 25560965 25563345 + 51.419028676575 NA intron (NM_001310666, intron 3 of 23) intron (NM_001310666, intron 3 of 23) -24649 NR_033492 77592 Mm.444871 NM_175264 4931406H21Rik - RIKEN cDNA 4931406H21 gene ncRNA common_peak2_132_1882_-0.834916971951868_10.4613587986383_51.4142147104708 chr13 23572648 23576432 + 51.4142147104708 NA promoter-TSS (NM_178195) promoter-TSS (NM_178195) 159 NM_178188 319165 Mm.390553 NM_178188 ENSMUSG00000071478 Hist1h2ad - histone cluster 1, H2ad protein-coding common_peak2_585_4875_0.416723563758993_12.4598441924997_51.406172293224 chr6 114891068 114897231 + 51.406172293224 NA intron (NM_177683, intron 1 of 4) intron (NM_177683, intron 1 of 4) 27603 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_168_716_0.981984539827506_9.97682157861566_51.1459603167389 chr15 36282076 36283707 + 51.1459603167389 NA intron (NM_013923, intron 1 of 9) CpG 256 NM_013923 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak1_396_2778_0.538792090407416_11.7097461644043_51.0979513654999 chr4 11703465 11706572 + 51.0979513654999 NA intron (NM_010276, intron 1 of 4) intron (NM_010276, intron 1 of 4) 571 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding common_peak2_405_2872_0.53046945743187_11.7535770062485_51.0910458029493 chr11 5519850 5522608 + 51.0910458029493 NA intron (NM_001271730, intron 1 of 5) CpG 588 NM_001271730 22433 Mm.469937 NM_013842 ENSMUSG00000020484 Xbp1 D11Ertd39e|TREB-5|TREB5|XBP-1 X-box binding protein 1 protein-coding common_peak1_188_867_0.904192443660587_10.2136474542748_51.0540558590508 chr9 52047491 52049078 + 51.0540558590508 NA 5' UTR (NM_009041, exon 1 of 14) 5' UTR (NM_009041, exon 1 of 14) 343 NM_001104617 19684 Mm.245746 NM_009041 ENSMUSG00000032050 Rdx AA516625 radixin protein-coding common_peak1_560_4589_0.426773751954137_12.3776653142782_50.9324292471829 chr2 156876451 156880643 + 50.9324292471829 NA intron (NM_029983, intron 5 of 7) intron (NM_029983, intron 5 of 7) 8531 NM_029983 77799 Mm.29264 NM_029983 ENSMUSG00000027636 Sla2 A930009E21Rik|AI430952|SLAP-2|SLAP2 Src-like-adaptor 2 protein-coding common_peak1_173_755_0.957167717631137_10.0408262830366_50.8480828483904 chr10 25359779 25360999 + 50.8480828483904 NA intron (NM_001199265, intron 1 of 19) CpG 591 NM_001199265 13822 Mm.306026 NM_013511 ENSMUSG00000019978 Epb41l2 4.1G|AW555191|D10Ertd398e|Epb4.1l2|NBL2 erythrocyte membrane protein band 4.1 like 2 protein-coding unique_peak2_43_750_-1.46625904363396_8.81953957569729_50.7935594990648 chr7 63973253 63975215 + 50.7935594990648 NA Intergenic Intergenic -35319 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak2_1023_10576_0.287284263020871_13.5122849987329_50.6691018178134 chr6 129575060 129600334 + 50.6691018178134 NA Intergenic B1F|SINE|Alu -4114 NM_010654 16643 Mm.391515 NM_010654 ENSMUSG00000030165 Klrd1 CD94 killer cell lectin-like receptor, subfamily D, member 1 protein-coding common_peak1_291_1751_0.660756589157167_11.1051653541798_50.6054361911158 chr11 53801650 53804893 + 50.6054361911158 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 32798 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_226_1177_0.787820923157271_10.5960342854091_50.5760510907905 chr5 139322456 139326040 + 50.5760510907905 NA intron (NM_172723, intron 1 of 10) intron (NM_172723, intron 1 of 10) 1216 NM_172723 231821 Mm.297819 NM_172723 ENSMUSG00000056413 Adap1 4930431P11Rik|Centa1|GC1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding common_peak1_138_1951_-0.808752556770285_10.5263610591777_50.5705841988399 chr11 113172591 113173714 + 50.5705841988399 NA intron (NR_015556, intron 1 of 2) IAPLTR2_Mm|LTR|ERVK 28686 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak2_679_6025_0.374493823817099_12.744231869503_50.5555538059104 chr15 82337759 82347431 + 50.5555538059104 NA intron (NM_177391, intron 1 of 1) intron (NM_177391, intron 1 of 1) 1416 NM_177391 338368 Mm.444916 NM_177391 ENSMUSG00000049687 Fam109b C920005C14Rik|IPIP27B|Ses2 family with sequence similarity 109, member B protein-coding common_peak1_751_6933_0.35010821096861_12.9345262266871_50.3904563348273 chr9 7870136 7874952 + 50.3904563348273 NA intron (NM_007464, intron 1 of 8) intron (NM_007464, intron 1 of 8) 626 NM_007464 11796 Mm.2026 NM_007464 ENSMUSG00000032000 Birc3 AW107670|Api1|Api2|Birc2|C-IAP2|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF49|cIAP-1|cIAP-2|cIAP1|cIAP2 baculoviral IAP repeat-containing 3 protein-coding common_peak2_111_339_1.33039843625293_9.07459015426417_50.3564044106293 chr2 31759501 31760804 + 50.3564044106293 NA promoter-TSS (NM_001283045) promoter-TSS (NM_001283045) -21 NM_001283045 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak1_337_2192_0.595736063042173_11.3965581281947_50.2987137847347 chr9 107288463 107290438 + 50.2987137847347 NA promoter-TSS (NM_001316691) promoter-TSS (NM_001316691) -54 NM_001316691 102626 Mm.222612 NM_178907 ENSMUSG00000032577 Mapkapk3 3PK|AI874665|MAPKAP-K3|MAPKAP3|MK-3|MK3|MapkKapk3 mitogen-activated protein kinase-activated protein kinase 3 protein-coding common_peak2_596_5022_0.406782750328874_12.4977249348363_50.2817094412456 chr5 113536458 113541954 + 50.2817094412456 NA Intergenic Intergenic -11214 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak2_46_784_-1.41341775635297_8.9098399656025_50.2235443623968 chr5 77164992 77167340 + 50.2235443623968 NA Intergenic Intergenic 45039 NM_001289767 69982 Mm.46106 NM_183284 ENSMUSG00000053030 Spink2 1700007F22Rik|AV038945|HUSI-II serine peptidase inhibitor, Kazal type 2 protein-coding common_peak2_512_4049_0.449061559197391_12.208236972258_50.1601247081439 chr13 49212568 49217086 + 50.1601247081439 NA intron (NM_026738, intron 1 of 5) intron (NM_026738, intron 1 of 5) 1199 NM_026738 68480 Mm.3336 NM_026738 ENSMUSG00000037960 Card19 1110007C09Rik|AI851695|Bincard caspase recruitment domain family, member 19 protein-coding common_peak1_695_6232_0.366923766814036_12.7891728808179_50.0668458425275 chr11 50209635 50214330 + 50.0668458425275 NA Intergenic Intergenic -1162 NM_011018 18412 Mm.40828 NM_011018 ENSMUSG00000015837 Sqstm1 A170|OSF-6|Osi|STAP|STONE14|p62 sequestosome 1 protein-coding common_peak1_336_2187_0.593785792351072_11.3922899189681_49.827502534496 chr2 156719856 156722636 + 49.827502534496 NA promoter-TSS (NM_001042487) promoter-TSS (NM_001042487) -33 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 discs, large homolog-associated protein 4 (Drosophila) protein-coding common_peak1_156_2179_-0.752636785258639_10.713794027035_49.8159507794731 chr10 44447301 44449398 + 49.8159507794731 NA intron (NM_007548, intron 3 of 6) intron (NM_007548, intron 3 of 6) 10399 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding common_peak2_528_4236_0.438290176443386_12.2679725015856_49.787490760577 chr17 47765227 47770597 + 49.787490760577 NA intron (NM_001161723, intron 1 of 8) intron (NM_001161723, intron 1 of 8) -17832 NM_011549 21425 Mm.2305 NM_011549 ENSMUSG00000023990 Tfeb Tcfeb|bHLHe35 transcription factor EB protein-coding common_peak2_577_4805_0.413259881625088_12.4372508739424_49.770812428928 chr11 109469967 109474580 + 49.770812428928 NA intron (NM_001029842, intron 1 of 5) CpG 956 NM_134038 104681 Mm.265874 NM_134038 ENSMUSG00000041920 Slc16a6 AW743111|ESTM12|MCT 6|MCT 7|MCT6 solute carrier family 16 (monocarboxylic acid transporters), member 6 protein-coding common_peak2_167_717_0.969471543534516_9.97257580559031_49.7474686711234 chr15 36281982 36283679 + 49.7474686711234 NA intron (NM_013923, intron 1 of 9) CpG 317 NM_013923 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak2_217_1108_0.803310896554283_10.5166990984389_49.7251959918398 chr17 24668897 24672267 + 49.7251959918398 NA intron (NM_183149, intron 1 of 11) intron (NM_183149, intron 1 of 11) 830 NM_183149 213753 Mm.219581 NM_183149 ENSMUSG00000041130 Zfp598 BC023040|Ntrap|Znf598 zinc finger protein 598 protein-coding common_peak1_121_403_1.23292027948153_9.27467162249256_49.7240539517192 chr17 31066586 31068399 + 49.7240539517192 NA intron (NM_009593, intron 2 of 14) intron (NM_009593, intron 2 of 14) 9798 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak2_154_2152_-0.757344812554607_10.6934601978899_49.7107143188179 chr7 66233044 66236761 + 49.7107143188179 NA Intergenic Lx5|LINE|L1 125387 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_115_366_1.28225168404207_9.16076209486425_49.709830372643 chr9 90237057 90238539 + 49.709830372643 NA intron (NM_194334, intron 3 of 12) intron (NM_194334, intron 3 of 12) 32971 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak2_1020_10555_0.284959430072352_13.5082553503624_49.6939112592286 chr2 129175467 129188191 + 49.6939112592286 NA Intergenic Intergenic -1156 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 OTTMUSG00000015420 expressed sequence AI847159 ncRNA common_peak1_31_594_-1.69388028388378_8.36980571625342_49.6758679168472 chr9 115611241 115611781 + 49.6758679168472 NA Intergenic Intergenic 229692 NR_130329 100316675 NR_130329 ENSMUSG00000080409 Mir467h Mirn467h|mmu-mir-467h microRNA 467h ncRNA common_peak1_50_830_-1.35103388964289_9.0231877219489_49.6562030758214 chr16 46010573 46011691 + 49.6562030758214 NA promoter-TSS (NM_001134480) promoter-TSS (NM_001134480) -719 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding common_peak2_149_2085_-0.769761423043741_10.6416427309979_49.6442693556505 chr3 96499329 96503304 + 49.6442693556505 NA Intergenic Intergenic -23869 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding common_peak2_220_1134_0.794064593870727_10.5455088791136_49.5958222249664 chr16 48992643 48994807 + 49.5958222249664 NA promoter-TSS (NM_172616) promoter-TSS (NM_172616) 387 NM_001110017 224170 Mm.275138 NM_027341 ENSMUSG00000064061 Dzip3 2310047C04Rik|2A-HUB|6430549P11Rik|A230104G20 DAZ interacting protein 3, zinc finger protein-coding common_peak1_465_3533_0.475637547508589_12.0249050983059_49.5492437017403 chr11 69087998 69089981 + 49.5492437017403 NA intron (NM_009497, intron 1 of 4) CpG 461 NM_009497 22318 Mm.28643 NM_009497 ENSMUSG00000020894 Vamp2 Syb-2|Syb2|sybII vesicle-associated membrane protein 2 protein-coding common_peak2_869_8492_0.315457194103624_13.2097871316787_49.544008783362 chr5 122986791 122992451 + 49.544008783362 NA promoter-TSS (NM_001003953) promoter-TSS (NM_001003953) 267 NR_045820 109202 Mm.30769 NM_175405 ENSMUSG00000056735 A930024E05Rik - RIKEN cDNA A930024E05 gene ncRNA common_peak1_136_1915_-0.807544289201321_10.5001097011355_49.4278361580357 chr6 48738282 48740077 + 49.4278361580357 NA intron (NM_175860, intron 1 of 2) intron (NM_175860, intron 1 of 2) 132 NM_008376 16205 Mm.252599 NM_008376 ENSMUSG00000090019 Gimap1 IAP38|Imap38|imap GTPase, IMAP family member 1 protein-coding common_peak2_36_654_-1.5755674452134_8.56756737381811_49.2410912684717 chr14 20392851 20394389 + 49.2410912684717 NA promoter-TSS (NM_025440) promoter-TSS (NM_025440) -65 NM_025440 66242 Mm.23747 NM_025440 ENSMUSG00000049960 Mrps16 1500011E11Rik|Mprs16 mitochondrial ribosomal protein S16 protein-coding common_peak1_166_713_0.966966341658861_9.96326343485853_49.2086628936548 chr12 100883378 100884733 + 49.2086628936548 NA intron (NM_001177673, intron 2 of 2) CT-rich|Low_complexity|Low_complexity 15469 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding common_peak1_131_1848_-0.821984939370605_10.4415370397189_49.2004777586565 chr10 128504302 128505686 + 49.2004777586565 NA TTS (NR_131151) TTS (NR_131151) 5747 NR_131151 654440 Mm.441262 NR_131150 ENSMUSG00000097353 A430046D13Rik - Riken cDNA A430046D13 gene ncRNA common_peak1_484_6799_-0.397875080783335_12.5323814906334_49.1681510970705 chr10 61296309 61301295 + 49.1681510970705 NA intron (NM_011073, intron 1 of 2) intron (NM_011073, intron 1 of 2) 966 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak2_119_1694_-0.86518850305329_10.2944753064971_49.1617985395599 chr13 23561113 23563671 + 49.1617985395599 NA promoter-TSS (NM_178205) promoter-TSS (NM_178205) -27 NM_178205 319151 Mm.261658 NM_178205 ENSMUSG00000069273 Hist1h3e H3-f|H3.1 histone cluster 1, H3e protein-coding common_peak1_574_4781_0.41127356313852_12.4290351962809_49.0028074406891 chr1 87623042 87628534 + 49.0028074406891 NA intron (NR_122078, intron 1 of 27) RSINE1|SINE|B4 5476 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_140_1962_-0.791578853886868_10.5430550305227_48.9767969854434 chr15 79658183 79659509 + 48.9767969854434 NA promoter-TSS (NM_028634) promoter-TSS (NM_028634) 110 NM_029407 75729 Mm.78946 NM_029407 ENSMUSG00000042564 Fam227a 4933432B09Rik family with sequence similarity 227, member A protein-coding common_peak2_543_4420_0.426440797951885_12.32337741793_48.9621050268036 chr5 93262907 93269302 + 48.9621050268036 NA Intergenic Intergenic -1469 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding common_peak2_711_6453_0.356877439836316_12.8344165824051_48.8661340715752 chr2 45107044 45118053 + 48.8661340715752 NA intron (NR_110571, intron 1 of 2) intron (NR_110571, intron 1 of 2) 288 NR_110571 433424 Mm.441408 NR_110571 ENSMUSG00000052248 Zeb2os Gm13476|OTTMUSG00000012358|Zeb2nat zinc finger E-box binding homeobox 2, opposite strand ncRNA common_peak2_518_4135_0.439324577330899_12.2336827589804_48.8448185440276 chr10 96616008 96624082 + 48.8448185440276 NA 3' UTR (NM_007569, exon 2 of 2) 3' UTR (NM_007569, exon 2 of 2) 3044 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_123_1742_-0.847450027018667_10.3436318406164_48.8328445122172 chr4 46421578 46422800 + 48.8328445122172 NA Intergenic Intergenic -18006 NM_053149 93966 Mm.25793 NM_053149 ENSMUSG00000028332 Hemgn 4921524M03Rik|AI317176|EDAG|Hgn|mNDR hemogen protein-coding common_peak1_75_1134_-1.09488775640867_9.60103270397394_48.8176613304688 chr10 81168027 81169275 + 48.8176613304688 NA promoter-TSS (NM_021501) promoter-TSS (NM_021501) -931 NM_021501 59004 Mm.34428 NM_021501 ENSMUSG00000004934 Pias4 PIASY|Pias-gamma|Piasg protein inhibitor of activated STAT 4 protein-coding common_peak1_293_1787_0.643492043067004_11.1258770427168_48.6772196194681 chr2 155381314 155382953 + 48.6772196194681 NA intron (NM_178111, intron 1 of 3) CpG 277 NM_178111 68728 Mm.293605 NM_178111 ENSMUSG00000038375 Trp53inp2 1110029F20Rik|Tp53inp2 transformation related protein 53 inducible nuclear protein 2 protein-coding common_peak1_117_1664_-0.869167745730444_10.2667225890934_48.6721871345174 chr17 3083854 3085153 + 48.6721871345174 NA promoter-TSS (NR_003519) promoter-TSS (NR_003519) -320 NR_003519 328734 Mm.335641 NR_003519 Pisd-ps2 D030013I16Rik phosphatidylserine decarboxylase, pseudogene 2 pseudo common_peak2_144_2011_-0.777645688414637_10.5855917455982_48.6300301313945 chr1 52016438 52023935 + 48.6300301313945 NA intron (NM_011487, intron 3 of 23) intron (NM_011487, intron 3 of 23) 11946 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 protein-coding common_peak1_232_3180_-0.599153095665665_11.3356881087067_48.6110566146838 chr9 44150584 44153641 + 48.6110566146838 NA intron (NM_007619, intron 15 of 15) intron (NM_007619, intron 15 of 15) 17454 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding common_peak1_70_1071_-1.13292964461075_9.49962436815239_48.6100051708818 chr2 127270239 127271180 + 48.6100051708818 NA exon (NM_139308, exon 1 of 8) exon (NM_139308, exon 1 of 8) 480 NM_139308 99138 Mm.41271 NM_139308 ENSMUSG00000027367 Stard7 AI852671|AL022671|AW544915 START domain containing 7 protein-coding common_peak2_477_3678_0.462618864305957_12.076407393126_48.6037519236946 chr7 19265156 19273153 + 48.6037519236946 NA intron (NR_104069, intron 1 of 10) MIR|SINE|MIR 2700 NM_001282021 22323 Mm.9684 NM_009499 ENSMUSG00000030403 Vasp - vasodilator-stimulated phosphoprotein protein-coding common_peak2_180_2481_-0.688080084653995_10.9332473578034_48.4505504800059 chr13 23744987 23747673 + 48.4505504800059 NA promoter-TSS (NM_175653) promoter-TSS (NM_175653) -404 NM_175664 319178 Mm.390567 NM_175664 ENSMUSG00000075031 Hist1h2bb H2b-143 histone cluster 1, H2bb protein-coding common_peak2_282_1687_0.659042900735578_11.050620639075_48.4357541890533 chr13 74807078 74809599 + 48.4357541890533 NA promoter-TSS (NM_009817) promoter-TSS (NM_009817) -378 NM_009817 12380 Mm.29163 NM_009817 ENSMUSG00000021585 Cast - calpastatin protein-coding common_peak2_191_2624_-0.664489305789683_11.025857054546_48.2550823627488 chr10 41809150 41811440 + 48.2550823627488 NA promoter-TSS (NM_026643) promoter-TSS (NM_026643) -279 NM_001162908 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding common_peak1_46_771_-1.38932594984206_8.89779406234705_48.1262453641841 chr2 167366752 167367522 + 48.1262453641841 NA Intergenic (CCCCCA)n|Simple_repeat|Simple_repeat -17959 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak1_112_1594_-0.88382121047983_10.1974301034123_48.0967527563122 chr7 3645193 3646167 + 48.0967527563122 NA intron (NM_146176, intron 1 of 17) CpG 411 NM_146176 232791 Mm.358731 NM_146176 ENSMUSG00000035632 Cnot3 A930039N10Rik CCR4-NOT transcription complex, subunit 3 protein-coding common_peak2_643_5624_0.377584154739933_12.6464294583617_48.0547094636888 chr7 101450519 101461230 + 48.0547094636888 NA intron (NM_001008548, intron 2 of 30) intron (NM_001008548, intron 2 of 30) 4622 NM_001243757 207728 Mm.247564 NM_001008548 ENSMUSG00000030653 Pde2a CGS-PDE|cGSPDE phosphodiesterase 2A, cGMP-stimulated protein-coding common_peak1_567_4714_0.409954423843624_12.4080192674843_48.0395435059681 chr11 109470286 109474086 + 48.0395435059681 NA intron (NM_001029842, intron 1 of 5) intron (NM_001029842, intron 1 of 5) 1043 NM_134038 104681 Mm.265874 NM_134038 ENSMUSG00000041920 Slc16a6 AW743111|ESTM12|MCT 6|MCT 7|MCT6 solute carrier family 16 (monocarboxylic acid transporters), member 6 protein-coding unique_peak1_60_89_2.1726663547173_7.57818627368832_48.0385846009562 chr1 87657295 87658460 + 48.0385846009562 NA intron (NR_122078, intron 2 of 27) intron (NR_122078, intron 2 of 27) 37565 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_864_8457_0.311215273342068_13.2017084816998_47.9379416118026 chr5 122987026 122992281 + 47.9379416118026 NA promoter-TSS (NM_001003953) promoter-TSS (NM_001003953) 299 NR_045820 109202 Mm.30769 NM_175405 ENSMUSG00000056735 A930024E05Rik - RIKEN cDNA A930024E05 gene ncRNA common_peak2_401_2867_0.515461218787458_11.7435599180956_47.935856020764 chr8 117255810 117259422 + 47.935856020764 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 597 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_289_1758_0.642841445105283_11.1019604900246_47.8340197527058 chr1 14306835 14310969 + 47.8340197527058 NA intron (NM_001310459, intron 1 of 17) intron (NM_001310459, intron 1 of 17) 1297 NM_001310459 14048 Mm.250185 NM_010164 ENSMUSG00000025932 Eya1 bor EYA transcriptional coactivator and phosphatase 1 protein-coding common_peak2_127_1783_-0.824809703236069_10.3884950483023_47.792512493985 chr10 127149018 127151920 + 47.792512493985 NA Intergenic Intergenic -14687 NR_045166 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak2_40_694_-1.47942590254544_8.70115621633815_47.764899578005 chr14 122062883 122065311 + 47.764899578005 NA Intergenic Charlie4a|DNA|hAT-Charlie 29423 NM_001037744 223262 Mm.297637 NM_001037744 ENSMUSG00000071229 Timm8a2 - translocase of inner mitochondrial membrane 8A2 protein-coding common_peak2_488_3812_0.451268144348539_12.1223448879004_47.7187996194382 chr19 53439485 53445084 + 47.7187996194382 NA non-coding (NR_028427, exon 10 of 10) non-coding (NR_028427, exon 10 of 10) 22512 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_92_1339_-0.977200564457545_9.89941700311636_47.7042307864132 chr11 33932158 33933466 + 47.7042307864132 NA intron (NM_001190886, intron 1 of 7) Tigger7|DNA|TcMar-Tigger -30201 NM_031169 16533 Mm.6206 NM_031169 ENSMUSG00000020155 Kcnmb1 BKbeta1 potassium large conductance calcium-activated channel, subfamily M, beta member 1 protein-coding common_peak1_43_731_-1.42928978440374_8.80105494608217_47.6556242806552 chr8 70538938 70539485 + 47.6556242806552 NA promoter-TSS (NM_007924) promoter-TSS (NM_007924) -464 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding common_peak1_292_1787_0.637462642009531_11.1228623421881_47.6467725013105 chr16 78375045 78376829 + 47.6467725013105 NA intron (NM_001297747, intron 1 of 4) intron (NM_001297747, intron 1 of 4) 820 NR_002700 654432 Mm.458574 NR_002700 ENSMUSG00000044645 Gm7334 EG654432 B-cell translocation gene 3 pseudogene pseudo common_peak1_158_2182_-0.732220133394394_10.7259863482936_47.591562891104 chr1 181859934 181862147 + 47.591562891104 NA Intergenic Intergenic -18639 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_189_2590_-0.664211198718526_11.0071877008208_47.5828197032588 chr13 34001891 34003396 + 47.5828197032588 NA promoter-TSS (NM_009068) promoter-TSS (NM_009068) 151 NM_001243192 20719 Mm.252210 NM_009254 ENSMUSG00000060147 Serpinb6a 4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6a protein-coding common_peak1_56_889_-1.25316280630359_9.17108012270197_47.4850383967275 chr10 77539975 77540827 + 47.4850383967275 NA intron (NM_008404, intron 1 of 15) B1_Mur3|SINE|Alu 10053 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding common_peak1_154_636_0.999638229356327_9.81496867693446_47.4791670942475 chr6 49073296 49074669 + 47.4791670942475 NA exon (NM_029353, exon 1 of 4) exon (NM_029353, exon 1 of 4) 187 NM_029353 75593 Mm.439947 NM_029353 ENSMUSG00000029815 Malsu1 2410003K15Rik|Matsu1 mitochondrial assembly of ribosomal large subunit 1 protein-coding common_peak1_51_828_-1.31319473566846_9.03863092366152_47.3888029310427 chr12 86948700 86949612 + 47.3888029310427 NA intron (NM_001289432, intron 1 of 4) intron (NM_001289432, intron 1 of 4) 1813 NM_001289432 217732 Mm.22337 NM_173735 ENSMUSG00000034157 Cipc 2310044G17Rik|AI842544|AI853744|Kiaa1737|mKIAA1737 CLOCK interacting protein, circadian protein-coding common_peak2_769_7220_0.333456511642089_12.9847111830167_47.3855350311865 chr18 80492507 80500809 + 47.3855350311865 NA Intergenic Intergenic -26991 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding common_peak2_171_761_0.925304605133341_10.03629949006_47.3570042751765 chr5 123682599 123684769 + 47.3570042751765 NA intron (NM_019765, intron 1 of 23) CpG 677 NM_001291229 56430 Mm.241109 NM_019765 ENSMUSG00000049550 Clip1 1110007I12Rik|4631429H07Rik|AV017631|C81039|CLIP-170|CLIP170|CYLN1|Clip50|Rsn|mKIAA4046|restin CAP-GLY domain containing linker protein 1 protein-coding common_peak1_53_851_-1.28588974219989_9.09176474912589_47.3356591760298 chr13 23697672 23698517 + 47.3356591760298 NA TTS (NM_178208) TTS (NM_178208) 364 NM_178208 319155 Mm.261662 NM_178208 ENSMUSG00000060678 Hist1h4c - histone cluster 1, H4c protein-coding common_peak2_520_4182_0.429829033001567_12.2452367991448_47.1719546986866 chr7 143004333 143011118 + 47.1719546986866 NA intron (NM_001128080, intron 3 of 8) intron (NM_001128080, intron 3 of 8) 2066 NM_001128081 27027 Mm.28172 NM_020286 ENSMUSG00000000244 Tspan32 AW208513|Art-1|BB235973|D7Wsu37e|Phemx|Tssc6 tetraspanin 32 protein-coding common_peak2_553_4565_0.412117216009184_12.3627737522293_47.0497463912021 chr15 78893255 78901181 + 47.0497463912021 NA Intergenic Intergenic -2550 NR_133564 20401 Mm.4462 NM_009164 ENSMUSG00000022436 Sh3bp1 3BP-1 SH3-domain binding protein 1 protein-coding common_peak2_97_1396_-0.944627757312423_9.97580242675325_47.0330159141376 chr1 85684979 85688339 + 47.0330159141376 NA intron (NM_013673, intron 11 of 19) intron (NM_013673, intron 11 of 19) 36671 NM_001313714 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding common_peak1_44_738_-1.40325191658152_8.82780459585539_46.9522942022403 chr9 22225513 22226211 + 46.9522942022403 NA intron (NR_028420, intron 1 of 4) CpG 150 NM_001164624 235047 Mm.290849 NM_172763 ENSMUSG00000057982 Zfp809 BB114266|C330026E23 zinc finger protein 809 protein-coding common_peak2_75_1120_-1.07698173703582_9.59207969428751_46.9505109648877 chr19 8952650 8954867 + 46.9505109648877 NA promoter-TSS (NM_197993) promoter-TSS (NM_197993) -92 NM_197993 70044 Mm.165979 NM_197993 ENSMUSG00000071645 Tut1 2700038E08Rik|PAPD2|Rbm21|TUTase6|U6-TUTase|star-PAP terminal uridylyl transferase 1, U6 snRNA-specific protein-coding common_peak2_439_3286_0.478572210864673_11.9218418465126_46.7359559937707 chr11 94989209 94994875 + 46.7359559937707 NA exon (NM_172261, exon 1 of 10) exon (NM_172261, exon 1 of 10) 830 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding common_peak2_306_1928_0.610553843851033_11.2189143499746_46.7308451276006 chr12 102645227 102649743 + 46.7308451276006 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 37535 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak2_384_2705_0.522881003674851_11.663386625814_46.6452211887314 chr11 74553928 74561976 + 46.6452211887314 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 32206 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_100_290_1.37197285069717_8.87086176825687_46.5268182541495 chr15 79356653 79357828 + 46.5268182541495 NA intron (NM_001304830, intron 2 of 2) intron (NM_001304830, intron 2 of 2) 8838 NM_001304832 17133 Mm.86646 NM_010755 ENSMUSG00000042622 Maff - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) protein-coding common_peak1_27_527_-1.75782936934053_8.16547943468819_46.5168079799846 chr7 3693701 3694249 + 46.5168079799846 NA promoter-TSS (NM_029934) promoter-TSS (NM_029934) 365 NM_001164205 66078 Mm.379100 NM_024168 ENSMUSG00000035585 Tsen34 0610027F08Rik|Leng5 tRNA splicing endonuclease subunit 34 protein-coding common_peak2_119_405_1.19654513778524_9.2636084860778_46.5111135239056 chr11 106761562 106763462 + 46.5111135239056 NA intron (NR_073165, intron 6 of 9) ID_B1|SINE|B4 11286 NM_001033435 380732 Mm.343952 NM_001033435 ENSMUSG00000040528 Milr1 Allergin-1|Gm885|Mca32 mast cell immunoglobulin like receptor 1 protein-coding common_peak1_96_1379_-0.945114188302123_9.95789545751447_46.4901392363778 chr3 88452653 88454119 + 46.4901392363778 NA intron (NM_001163489, intron 2 of 14) intron (NM_001163489, intron 2 of 14) 2375 NM_013658 20351 Mm.439752 NM_013658 ENSMUSG00000028064 Sema4a AI132332|SemB|Semab sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A protein-coding common_peak1_427_3160_0.486029721823986_11.8691801808165_46.4619141787295 chr5 31633638 31638325 + 46.4619141787295 NA intron (NM_153196, intron 7 of 7) intron (NM_153196, intron 7 of 7) 22030 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_1076_11424_0.265321070568003_13.6125670801168_46.3473848314817 chr9 32498382 32512311 + 46.3473848314817 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 36106 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_41_698_-1.44506169039058_8.72661780018015_46.2453536793972 chr13 48524810 48525902 + 46.2453536793972 NA Intergenic RLTR30|LTR|ERV1 10758 NR_029656 387247 NR_029656 ENSMUSG00000065453 Mirlet7d Mirnlet7d|let-7d|mmu-let-7d microRNA let7d ncRNA common_peak2_100_1426_-0.921921425870305_10.0178089065406_46.1839463056133 chr14 51062793 51065883 + 46.1839463056133 NA Intergenic Intergenic -7096 NM_001011875 497106 Mm.379740 NM_001011875 ENSMUSG00000068407 Rnase12 Rai1 ribonuclease, RNase A family, 12 (non-active) protein-coding common_peak1_924_9305_0.292049353210805_13.3299701483626_46.1597010364473 chr7 43433843 43440114 + 46.1597010364473 NA promoter-TSS (NM_024253) promoter-TSS (NM_024253) -160 NM_024253 72310 Mm.34613 NM_024253 ENSMUSG00000004612 Nkg7 2500004F03Rik natural killer cell group 7 sequence protein-coding common_peak1_66_1003_-1.14099985380105_9.40104362705025_46.144315006523 chr17 56255999 56256703 + 46.144315006523 NA promoter-TSS (NM_010192) promoter-TSS (NM_010192) -442 NM_010192 14154 Mm.290813 NM_010192 ENSMUSG00000043683 Fem1a AW611390|Fem1aa feminization 1 homolog a (C. elegans) protein-coding common_peak1_193_2626_-0.647249810583867_11.0355755798417_46.1248844595325 chr8 72161106 72162770 + 46.1248844595325 NA intron (NM_023126, intron 1 of 7) MIRb|SINE|MIR 738 NM_023126 17274 Mm.162811 NM_023126 ENSMUSG00000003037 Rab8a AA409338|Mel RAB8A, member RAS oncogene family protein-coding common_peak2_453_3446_0.465431474806817_11.9838413207707_46.1230215822368 chr6 113376889 113379811 + 46.1230215822368 NA promoter-TSS (NM_133932) promoter-TSS (NM_133932) 237 NM_001170485 68089 Mm.289306 NM_026552 ENSMUSG00000079426 Arpc4 20kDa|5330419I20Rik|AI327076|p20-Arc actin related protein 2/3 complex, subunit 4 protein-coding common_peak2_213_1102_0.778365654950747_10.4963999030668_46.1058587933828 chr14 25492000 25495244 + 46.1058587933828 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 34437 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_708_6465_0.346725461804786_12.8320205230285_46.1016177593455 chr2 29660203 29665657 + 46.1016177593455 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 43210 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_327_2138_0.57855943145945_11.3520004828948_46.0169092036465 chr4 119538790 119541285 + 46.0169092036465 NA intron (NM_001290696, intron 1 of 11) CpG 376 NM_172699 230700 Mm.259227 NM_172699 ENSMUSG00000032998 Foxj3 C330039G02Rik|Fhd6 forkhead box J3 protein-coding common_peak1_33_598_-1.59626362062826_8.42828038247466_46.0011203218609 chr12 86950620 86951323 + 46.0011203218609 NA intron (NM_001289432, intron 1 of 4) intron (NM_001289432, intron 1 of 4) 3628 NM_001289432 217732 Mm.22337 NM_173735 ENSMUSG00000034157 Cipc 2310044G17Rik|AI842544|AI853744|Kiaa1737|mKIAA1737 CLOCK interacting protein, circadian protein-coding common_peak2_324_2110_0.581309243864059_11.3343654852792_45.8766238903106 chr12 25225946 25229983 + 45.8766238903106 NA Intergenic Intergenic 98790 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_71_1062_-1.09601589728573_9.50591793288824_45.793061640541 chr2 22783295 22785898 + 45.793061640541 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 10269 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak2_371_2582_0.529209415142303_11.5994366356892_45.7482210674835 chr19 11442947 11451276 + 45.7482210674835 NA intron (NM_021718, intron 1 of 6) intron (NM_021718, intron 1 of 6) 3553 NM_021718 60361 Mm.33957 NM_021718 ENSMUSG00000056290 Ms4a4b AI463180|Chandra|Ly116 membrane-spanning 4-domains, subfamily A, member 4B protein-coding common_peak1_552_4573_0.406394549967116_12.3624379253952_45.7196565424634 chr7 25686120 25690267 + 45.7196565424634 NA exon (NM_011577, exon 1 of 7) exon (NM_011577, exon 1 of 7) 1191 NM_011577 21803 Mm.248380 NM_011577 ENSMUSG00000002603 Tgfb1 TGF-beta1|TGFbeta1|Tgfb|Tgfb-1 transforming growth factor, beta 1 protein-coding common_peak1_533_4354_0.415308192617601_12.296111099795_45.632049958489 chr8 25100843 25104014 + 45.632049958489 NA promoter-TSS (NM_031257) promoter-TSS (NM_031257) -617 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_254_1459_0.684023710238398_10.8537645088866_45.6168551098084 chr4 154926721 154929715 + 45.6168551098084 NA promoter-TSS (NM_178931) promoter-TSS (NM_178931) -141 NM_178931 230979 Mm.215147 NM_178931 ENSMUSG00000042333 Tnfrsf14 Atar|HveA|Hvem|Tnfrs14 tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator) protein-coding common_peak1_282_1713_0.636990695330264_11.0616467417776_45.6145222224819 chr3 51559054 51561673 + 45.6145222224819 NA intron (NR_033624, intron 1 of 4) CpG 460 NM_080793 73251 Mm.192111 NM_080793 ENSMUSG00000037111 Setd7 1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717 SET domain containing (lysine methyltransferase) 7 protein-coding common_peak1_47_766_-1.34269498822448_8.91173527339069_45.5683018007995 chr9 21366935 21367690 + 45.5683018007995 NA promoter-TSS (NM_001042709) promoter-TSS (NM_001042709) -559 NM_001042708 16201 Mm.440026 NM_010561 ENSMUSG00000032178 Ilf3 MBII-26|MPHOSPH4|NF90|NFAR interleukin enhancer binding factor 3 protein-coding common_peak2_101_1433_-0.911546220388091_10.0300561985079_45.5635680292559 chr4 116626093 116628533 + 45.5635680292559 NA intron (NM_001081475, intron 1 of 13) CpG 184 NM_001081475 50927 Mm.257181 NM_016777 ENSMUSG00000028693 Nasp 5033430J04Rik|AI131596|AI317140|D4Ertd767e|Epcs32|Nasp-T nuclear autoantigenic sperm protein (histone-binding) protein-coding common_peak2_466_3597_0.453537815977167_12.0397483792401_45.5480607536902 chr7 16045219 16049392 + 45.5480607536902 NA Intergenic Intergenic -24637 NM_001099277 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak2_828_8027_0.311265499128076_13.1264576509267_45.541194655949 chr10 96347832 96359557 + 45.541194655949 NA Intergenic Intergenic 127487 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_396_2843_0.505436459988562_11.7264239796137_45.5257285729044 chr8 117256011 117259411 + 45.5257285729044 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 692 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_137_1890_-0.775726016516611_10.4970706396915_45.5054980677034 chr10 61331547 61336135 + 45.5054980677034 NA intron (NM_013753, intron 18 of 19) (TG)n|Simple_repeat|Simple_repeat 36005 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak1_323_2105_0.579276984339874_11.3299282131957_45.4918721557931 chr1 120053678 120057463 + 45.4918721557931 NA intron (NM_001311077, intron 10 of 12) intron (NM_001311077, intron 10 of 12) 18210 NM_019432 170706 Mm.24750 NM_019432 ENSMUSG00000050777 Tmem37 AI173373|AW540203|Pr|Pr1 transmembrane protein 37 protein-coding common_peak1_28_534_-1.71473176677594_8.20602919790054_45.4793014102409 chr4 62593365 62593852 + 45.4793014102409 NA intron (NM_019492, intron 3 of 19) intron (NM_019492, intron 3 of 19) -26064 NM_001081650 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_707_6465_0.344227751441734_12.830771667847_45.3677711567091 chr7 66224930 66233012 + 45.3677711567091 NA Intergenic MLT1A1|LTR|ERVL-MaLR 119456 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_125_449_1.1344402799211_9.38100133117759_45.2942263189917 chr8 120765620 120767012 + 45.2942263189917 NA Intergenic Intergenic 27677 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_381_5219_-0.438850274284096_12.1304089543152_45.2767195376962 chr12 86945915 86952083 + 45.2767195376962 NA intron (NM_001289432, intron 1 of 4) intron (NM_001289432, intron 1 of 4) 1656 NM_001289432 217732 Mm.22337 NM_173735 ENSMUSG00000034157 Cipc 2310044G17Rik|AI842544|AI853744|Kiaa1737|mKIAA1737 CLOCK interacting protein, circadian protein-coding common_peak2_592_5054_0.385724232952981_12.4963574932669_45.1838783879319 chr8 94385454 94388549 + 45.1838783879319 NA intron (NM_022331, intron 1 of 7) intron (NM_022331, intron 1 of 7) 501 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak2_127_1758_-0.804449570787725_10.3783149820781_45.1557695644519 chr9 121704098 121707436 + 45.1557695644519 NA promoter-TSS (NM_178677) promoter-TSS (NM_178677) -738 NM_178677 215474 Mm.31421 NM_178677 ENSMUSG00000061536 Sec22c 4932412K21|5930407I15Rik|C530046H07|Sec22l3 SEC22 homolog C, vesicle trafficking protein protein-coding common_peak1_287_1764_0.625682138459549_11.0982935373883_45.1539604375586 chr11 98958735 98961404 + 45.1539604375586 NA promoter-TSS (NM_001176528) promoter-TSS (NM_001176528) -402 NM_001176528 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_32_581_-1.6075553952474_8.38109764528458_45.1193368521675 chr7 80781660 80782245 + 45.1193368521675 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 21379 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_351_2386_0.545264136357599_11.4936149192606_45.0889356021412 chr5 124077719 124082455 + 45.0889356021412 NA exon (NM_019875, exon 6 of 12) exon (NM_019875, exon 6 of 12) 15711 NM_019875 56325 Mm.254839 NM_019875 ENSMUSG00000029408 Abcb9 TAPL|mKIAA1520 ATP-binding cassette, sub-family B (MDR/TAP), member 9 protein-coding common_peak2_319_2070_0.581471634155687_11.3068476552984_45.0809926693496 chr14 103097837 103100482 + 45.0809926693496 NA intron (NM_015822, intron 1 of 4) CpG 350 NM_015822 50789 Mm.214746 NM_015822 ENSMUSG00000022124 Fbxl3 AU041772|AW212966|FBK|Fbl3a|Fbxl3a|Ovtm|Play68 F-box and leucine-rich repeat protein 3 protein-coding common_peak1_76_1118_-1.05127278020333_9.60235793087473_44.9881850170662 chr4 116626714 116627752 + 44.9881850170662 NA intron (NM_001081475, intron 1 of 13) CpG 264 NM_001081475 50927 Mm.257181 NM_016777 ENSMUSG00000028693 Nasp 5033430J04Rik|AI131596|AI317140|D4Ertd767e|Epcs32|Nasp-T nuclear autoantigenic sperm protein (histone-binding) protein-coding common_peak1_37_641_-1.49945297253906_8.57670300085277_44.9738112832054 chr19 8953883 8954452 + 44.9738112832054 NA intron (NM_197993, intron 1 of 8) intron (NM_197993, intron 1 of 8) 317 NM_197993 70044 Mm.165979 NM_197993 ENSMUSG00000071645 Tut1 2700038E08Rik|PAPD2|Rbm21|TUTase6|U6-TUTase|star-PAP terminal uridylyl transferase 1, U6 snRNA-specific protein-coding common_peak1_667_5972_0.355731221619013_12.7221056172512_44.9472938346501 chr9 110650597 110655060 + 44.9472938346501 NA intron (NM_183276, intron 1 of 53) intron (NM_183276, intron 1 of 53) 1333 NM_183276 235627 Mm.335481 NM_183276 ENSMUSG00000056724 Nbeal2 1110014F23Rik|BC042396|mKIAA0540 neurobeachin-like 2 protein-coding common_peak1_26_506_-1.76363437016375_8.10402475192147_44.9425411753209 chr8 34149710 34150328 + 44.9425411753209 NA Intergenic Intergenic -3280 NM_026609 68192 Mm.34212 NM_026609 ENSMUSG00000031513 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 protein-coding common_peak1_97_1378_-0.92591819341694_9.96644764480551_44.9053218611221 chr10 127149950 127151640 + 44.9053218611221 NA Intergenic Intergenic -14361 NR_045166 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak1_162_710_0.930138694301954_9.93877509677039_44.7892280181076 chr11 67607571 67609614 + 44.7892280181076 NA intron (NM_001277079, intron 2 of 13) intron (NM_001277079, intron 2 of 13) 12037 NM_001277079 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_636_5594_0.36595873612176_12.6329017839246_44.707905026296 chr5 123135353 123140675 + 44.707905026296 NA Intergenic Intergenic -4179 NM_001040398 208043 Mm.250391 NM_177581 ENSMUSG00000038384 Setd1b AA516740|BC035291|KMT2G|mKIAA1076 SET domain containing 1B protein-coding common_peak1_599_5147_0.380190303628035_12.5198914900347_44.6352926653258 chr4 145219604 145223481 + 44.6352926653258 NA intron (NM_011610, intron 8 of 9) intron (NM_011610, intron 8 of 9) 25328 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_192_942_0.821691331771163_10.2919596265607_44.6300116546904 chr13 93498260 93500413 + 44.6300116546904 NA 5' UTR (NM_021310, exon 1 of 11) 5' UTR (NM_021310, exon 1 of 11) 472 NM_021310 57748 Mm.100273 NM_021310 ENSMUSG00000021690 Jmy - junction-mediating and regulatory protein protein-coding common_peak1_128_1766_-0.797224638144383_10.3884740054794_44.6182386838901 chr4 141558788 141560130 + 44.6182386838901 NA Intergenic Intergenic 13297 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak2_318_2065_0.579420188775362_11.3023346332527_44.6174568718225 chr19 7493500 7496209 + 44.6174568718225 NA intron (NM_146091, intron 1 of 12) CpG 416 NM_146091 109168 Mm.264016 NM_146091 ENSMUSG00000024759 Atl3 4633402C03Rik|5730596K20Rik|AI465397|AW228836 atlastin GTPase 3 protein-coding common_peak1_526_4289_0.413652514941825_12.2735881898578_44.5904451100135 chr17 33999095 34003064 + 44.5904451100135 NA promoter-TSS (NM_001001892) promoter-TSS (NM_001001892) -746 NM_001001892 14972 Mm.422886 NM_001001892 ENSMUSG00000061232 H2-K1 H-2K|H-2K(d)|H2-K|K-f histocompatibility 2, K1, K region protein-coding common_peak2_579_4909_0.388486214561544_12.4557504164828_44.5744839990702 chr2 91956622 91966484 + 44.5744839990702 NA intron (NM_138306, intron 1 of 30) intron (NM_138306, intron 1 of 30) 2010 NM_138306 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak2_52_820_-1.26549664633469_9.04849008861046_44.5232500361516 chr9 21366721 21367852 + 44.5232500361516 NA promoter-TSS (NM_001042709) promoter-TSS (NM_001042709) -585 NM_001042708 16201 Mm.440026 NM_010561 ENSMUSG00000032178 Ilf3 MBII-26|MPHOSPH4|NF90|NFAR interleukin enhancer binding factor 3 protein-coding common_peak2_672_6042_0.352118389870036_12.7371084216347_44.4906106037615 chr2 29619734 29626790 + 44.4906106037615 NA intron (NM_054050, intron 1 of 23) MER102b|DNA|hAT-Charlie 3542 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_19_417_-2.01622490445011_7.69924667985583_44.4338581195282 chr17 31563931 31564385 + 44.4338581195282 NA promoter-TSS (NR_027493) promoter-TSS (NR_027493) -615 NR_027493 18771 Mm.259295 NM_016670 ENSMUSG00000006705 Pknox1 D17Wsu76e|PREP1 Pbx/knotted 1 homeobox protein-coding common_peak2_55_856_-1.22997433290822_9.12816422765839_44.4132671149404 chr7 29983024 29984830 + 44.4132671149404 NA promoter-TSS (NM_001033355) promoter-TSS (NM_001033355) -28 NM_001167873 243905 Mm.322432 NM_001033355 ENSMUSG00000074221 Zfp568 C80731|Gm1691|Znf568|chato zinc finger protein 568 protein-coding common_peak1_18_405_-2.06497171378829_7.63285006029103_44.4009644379493 chr5 21737111 21737536 + 44.4009644379493 NA intron (NM_028431, intron 1 of 12) CpG 163 NM_028431 73078 Mm.301655 NM_028431 ENSMUSG00000029017 Pmpcb 3110004O18Rik|MPP11|MPPB|MPPP52 peptidase (mitochondrial processing) beta protein-coding common_peak1_463_3580_0.448965755937468_12.0306296812893_44.3493284719831 chr19 44283331 44285408 + 44.3493284719831 NA Intergenic CpG -9307 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_63_953_-1.14836757050763_9.3236616707517_44.3354091153201 chr11 97987469 97989413 + 44.3354091153201 NA Intergenic Intergenic -1995 NM_001163608 72324 Mm.39617 NM_028199 ENSMUSG00000017417 Plxdc1 2410003I07Rik|AI848450|Tem7 plexin domain containing 1 protein-coding common_peak1_440_3329_0.463838807258627_11.9332258655879_44.2826663499257 chr2 166607056 166611751 + 44.2826663499257 NA intron (NM_177782, intron 10 of 39) intron (NM_177782, intron 10 of 39) -63315 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak2_342_2305_0.549235548524384_11.445794571914_44.258420161694 chr6 47453231 47456024 + 44.258420161694 NA intron (NM_012042, intron 1 of 21) CpG 303 NM_012042 26965 Mm.87611 NM_012042 ENSMUSG00000029686 Cul1 - cullin 1 protein-coding common_peak1_564_4737_0.393562601810489_12.4068437841455_44.2416383124996 chr2 25145224 25150771 + 44.2416383124996 NA Intergenic Intergenic -32761 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak1_440_3330_0.463405630542901_11.9334424539458_44.2072131156057 chr6 113377171 113379220 + 44.2072131156057 NA promoter-TSS (NM_133932) promoter-TSS (NM_133932) 82 NM_001170485 68089 Mm.289306 NM_026552 ENSMUSG00000079426 Arpc4 20kDa|5330419I20Rik|AI327076|p20-Arc actin related protein 2/3 complex, subunit 4 protein-coding common_peak1_325_2138_0.567735987942681_11.3465887611364_44.1492801430594 chr4 119538843 119541263 + 44.1492801430594 NA intron (NM_001290696, intron 1 of 11) CpG 392 NM_172699 230700 Mm.259227 NM_172699 ENSMUSG00000032998 Foxj3 C330039G02Rik|Fhd6 forkhead box J3 protein-coding common_peak2_402_2923_0.491959523856703_11.7597073578808_44.1480926436781 chr3 135689052 135692653 + 44.1480926436781 NA intron (NM_008689, intron 1 of 24) intron (NM_008689, intron 1 of 24) 695 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_345_2337_0.544763628147251_11.4634410286053_44.1340674428386 chr4 132944574 132948120 + 44.1340674428386 NA Intergenic Intergenic -23796 NM_001163792 230789 Mm.11473 NM_145553 ENSMUSG00000028878 Fam76a - family with sequence similarity 76, member A protein-coding common_peak2_50_794_-1.28714027304426_8.99124091364959_44.0968562979823 chrX 35896054 35899165 + 44.0968562979823 NA intron (NM_001009947, intron 1 of 52) intron (NM_001009947, intron 1 of 52) 8777 NM_001009947 75974 Mm.32873 NM_177745 ENSMUSG00000031093 Dock11 5033414A21Rik|8030476J24|Zizimin2|sph238 dedicator of cytokinesis 11 protein-coding common_peak2_1198_13251_0.241201160576473_13.8145230683693_44.0785303752209 chr16 92814324 92828169 + 44.0785303752209 NA intron (NM_001111022, intron 2 of 6) MLT1C|LTR|ERVL-MaLR 4828 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_513_4147_0.418013781529806_12.2272070695781_44.0667607203168 chr17 47765679 47770279 + 44.0667607203168 NA intron (NM_001161723, intron 1 of 8) intron (NM_001161723, intron 1 of 8) -17765 NM_011549 21425 Mm.2305 NM_011549 ENSMUSG00000023990 Tfeb Tcfeb|bHLHe35 transcription factor EB protein-coding common_peak2_224_1211_0.731110240970001_10.608729103958_43.9847871850447 chr2 10079350 10081220 + 43.9847871850447 NA promoter-TSS (NM_025280) promoter-TSS (NM_025280) 225 NM_020615 11949 Mm.12677 NM_020615 ENSMUSG00000025781 Atp5c1 1700094F02Rik ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 protein-coding common_peak2_161_708_0.923312576939718_9.93129810570938_43.9361169155329 chr11 67607611 67609653 + 43.9361169155329 NA intron (NM_001277079, intron 2 of 13) intron (NM_001277079, intron 2 of 13) 12077 NM_001277079 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_577_4896_0.386198334046188_12.4507816477319_43.9140064875908 chr10 80021541 80026316 + 43.9140064875908 NA intron (NM_001142701, intron 10 of 22) URR1A|DNA|hAT-Charlie 4253 NM_027521 70719 Mm.243954 NM_027521 ENSMUSG00000035697 Hmha1 6330406L22Rik|AW539505|Ha-1 histocompatibility (minor) HA-1 protein-coding common_peak1_15_366_-2.22338298971805_7.40794475798419_43.8857906459201 chr4 123577810 123578198 + 43.8857906459201 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -38416 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak1_38_646_-1.46467845238465_8.60528267580018_43.8693919466168 chr8 128594443 128595166 + 43.8693919466168 NA Intergenic Intergenic -90850 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_549_4567_0.398661981087749_12.3566779259067_43.8522400752335 chr17 84139980 84147539 + 43.8522400752335 NA Intergenic Intergenic 44188 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_56_864_-1.21205760297391_9.15052752103713_43.8090839571912 chr10 61280590 61281347 + 43.8090839571912 NA Intergenic B1_Mur4|SINE|Alu -7530 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak1_37_634_-1.48363626707628_8.56879464812139_43.7926019406127 chr15 76514398 76515066 + 43.7926019406127 NA Intergenic Intergenic -2914 NM_010046 13350 Mm.22633 NM_010046 ENSMUSG00000022555 Dgat1 ARAT|C75990|D15Ertd23e|Dgat diacylglycerol O-acyltransferase 1 protein-coding common_peak2_765_7238_0.320647907177868_12.9818986545258_43.7529955302425 chr12 86831379 86837331 + 43.7529955302425 NA Intergenic B1_Mur3|SINE|Alu 50459 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_241_1360_0.69272780431781_10.7568152536629_43.7486349683507 chr2 127322218 127325495 + 43.7486349683507 NA Intergenic Intergenic -12303 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak2_967_9951_0.275633008063911_13.4185872741626_43.7333170599229 chr19 11044013 11057496 + 43.7333170599229 NA promoter-TSS (NR_102366) promoter-TSS (NR_102366) -188 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA common_peak1_124_450_1.11713715575932_9.37555220113504_43.7170147604659 chr19 36553838 36555411 + 43.7170147604659 NA promoter-TSS (NM_001163471) promoter-TSS (NM_001163471) -15 NM_001163471 226098 Mm.61107 NM_172637 ENSMUSG00000041180 Hectd2 4921524L07|A630025O09Rik|AW212605 HECT domain containing 2 protein-coding common_peak1_136_531_1.04105512103367_9.57580999601802_43.6774540518393 chr13 109902475 109904158 + 43.6774540518393 NA promoter-TSS (NR_035442) promoter-TSS (NR_035442) -493 NR_035442 100316683 NR_035442 ENSMUSG00000084651 Mir1904 Mirn1904|mmu-mir-1904 microRNA 1904 ncRNA common_peak2_117_1618_-0.828748554074386_10.2465129932654_43.6545339592105 chr4 151861957 151863355 + 43.6545339592105 NA promoter-TSS (NM_001081557) promoter-TSS (NM_001081557) -888 NM_001195565 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak1_292_3936_-0.501287333966191_11.6922373301759_43.6424796721576 chr13 24613706 24617395 + 43.6424796721576 NA intron (NM_178658, intron 1 of 13) intron (NM_178658, intron 1 of 13) 944 NM_178658 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_469_3657_0.441009625741977_12.0573441726197_43.6177469919276 chr15 83562328 83565828 + 43.6177469919276 NA intron (NM_009775, intron 1 of 3) intron (NM_009775, intron 1 of 3) 505 NM_009775 12257 Mm.1508 NM_009775 ENSMUSG00000041736 Tspo Bzrp|IBP|PBR|Tspo1 translocator protein protein-coding common_peak1_183_878_0.838578382509175_10.199008546398_43.5791932025994 chr6 39724584 39726030 + 43.5791932025994 NA 5' UTR (NM_139294, exon 1 of 22) 5' UTR (NM_139294, exon 1 of 22) 156 NM_139294 109880 Mm.245513 NM_139294 ENSMUSG00000002413 Braf 9930012E13Rik|AA120551|AA387315|AA473386|B-raf|Braf-2|Braf2|C230098H17|C87398|D6Ertd631e Braf transforming gene protein-coding common_peak2_208_1080_0.765594808790093_10.4609482121297_43.5523861345477 chr10 85871095 85873245 + 43.5523861345477 NA intron (NM_133993, intron 1 of 14) CpG 339 NM_133993 103136 Mm.18834 NM_133993 ENSMUSG00000001785 Pwp1 2310058A11Rik|2610205J09Rik|AI098170|AL022879|AV083409|AW550690 PWP1 homolog, endonuclein protein-coding common_peak2_163_725_0.910842149442388_9.95924681271694_43.5491068545494 chr8 20121672 20123481 + 43.5491068545494 NA Intergenic CpG 174856 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo common_peak2_599_5165_0.375154713730737_12.5224092849834_43.5445742931158 chr17 17622599 17626977 + 43.5445742931158 NA promoter-TSS (NM_172827) promoter-TSS (NM_172827) -299 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_27_511_-1.71343524998207_8.14328237500896_43.5266231933359 chr13 23746731 23747334 + 43.5266231933359 NA exon (NM_175664, exon 1 of 1) exon (NM_175664, exon 1 of 1) 298 NM_175664 319178 Mm.390567 NM_175664 ENSMUSG00000075031 Hist1h2bb H2b-143 histone cluster 1, H2bb protein-coding common_peak2_625_5481_0.364568894354793_12.6027710600032_43.4833019431544 chr13 33000531 33009506 + 43.4833019431544 NA intron (NM_009256, intron 1 of 6) intron (NM_009256, intron 1 of 6) 477 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding common_peak2_299_1894_0.595392197603926_11.1856782318604_43.464109470369 chr11 98958536 98962010 + 43.464109470369 NA promoter-TSS (NM_001176528) promoter-TSS (NM_001176528) -198 NM_001176528 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_518_4214_0.412028131816388_12.2473309817376_43.4079835434431 chr7 31039899 31043586 + 43.4079835434431 NA promoter-TSS (NM_001111073) promoter-TSS (NM_001111073) 97 NM_001111073 18301 Mm.1870 NM_008761 ENSMUSG00000009687 Fxyd5 EF-8|Oit2|RIC FXYD domain-containing ion transport regulator 5 protein-coding common_peak1_959_9848_0.275956453235347_13.4037397619118_43.390347494384 chr12 104057307 104063817 + 43.390347494384 NA Intergenic B4A|SINE|B4 -16119 NM_026535 68054 Mm.20286 NM_026535 ENSMUSG00000041567 Serpina12 4632419J12Rik serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12 protein-coding common_peak1_46_741_-1.33214428919479_8.86920323202341_43.3881857258426 chr10 81507725 81508795 + 43.3881857258426 NA intron (NM_010304, intron 5 of 6) intron (NM_010304, intron 5 of 6) -8123 NM_010102 13611 Mm.33065 NM_010102 ENSMUSG00000044199 S1pr4 Edg6|Lpc1|S1p4 sphingosine-1-phosphate receptor 4 protein-coding common_peak2_1038_10955_0.262227830885768_13.5505474661483_43.3861245341508 chr19 53419420 53426820 + 43.3861245341508 NA Intergenic MTD|LTR|ERVL-MaLR -32547 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding unique_peak2_33_583_-1.55967598671949_8.40998656552027_43.3694742473499 chr10 120696048 120698643 + 43.3694742473499 NA Intergenic MIR3|SINE|MIR -68387 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_864_8553_0.294932626494536_13.2098498051236_43.3272274371875 chr5 140606278 140620316 + 43.3272274371875 NA exon (NM_008494, exon 6 of 8) exon (NM_008494, exon 6 of 8) 5956 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding unique_peak2_13_338_-2.34518902430477_7.23254695098396_43.3197503124383 chr3 52839742 52841366 + 43.3197503124383 NA Intergenic Intergenic 87112 NR_040555 622124 Mm.389434 NR_040555 ENSMUSG00000104401 Gm20750 - predicted gene, 20750 ncRNA common_peak2_177_2383_-0.659537840511618_10.8893996002064_43.2857682799926 chr11 113172177 113175054 + 43.2857682799926 NA intron (NR_015556, intron 1 of 2) (CA)n|Simple_repeat|Simple_repeat 28223 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak2_174_810_0.865993197184581_10.0965547028096_43.2739648686574 chr10 19103820 19106034 + 43.2739648686574 NA Intergenic Intergenic -36822 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_151_639_0.958273042068596_9.80106461592166_43.2689607641491 chr4 109475816 109477129 + 43.2689607641491 NA promoter-TSS (NM_013876) promoter-TSS (NM_013876) 33 NM_013876 29864 Mm.392580 NM_013876 ENSMUSG00000028557 Rnf11 - ring finger protein 11 protein-coding common_peak1_184_888_0.831849629259962_10.2119644234598_43.2190083794632 chr7 25705921 25707599 + 43.2190083794632 NA Intergenic Intergenic 12293 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak1_32_570_-1.58002698770196_8.36733344151186_43.1771737711841 chr1 36766319 36767042 + 43.1771737711841 NA promoter-TSS (NM_001289765) promoter-TSS (NM_001289765) -254 NM_001289765 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak2_312_2022_0.57616259143593_11.2703619002762_43.1679229661189 chr13 85428532 85431949 + 43.1679229661189 NA Intergenic Intergenic -140754 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak1_523_4277_0.40759111705454_12.2665163256923_43.0864331419782 chr11 107468036 107471174 + 43.0864331419782 NA intron (NM_145823, intron 1 of 9) CpG 1115 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_172_796_0.870774617502077_10.0738232227415_43.0380141208823 chr10 19103828 19105828 + 43.0380141208823 NA Intergenic Intergenic -36921 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_323_2131_0.561574982606414_11.3387792140624_43.0363097031088 chr9 107295045 107297703 + 43.0363097031088 NA promoter-TSS (NM_009895) promoter-TSS (NM_009895) -315 NM_009895 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak2_41_678_-1.40318080925988_8.70567735961479_42.9817649136935 chr16 91474950 91476976 + 42.9817649136935 NA Intergenic RLTR16|LTR|ERVK -9252 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 CD118|Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding common_peak1_702_6446_0.335931568079616_12.8223780521887_42.975887695453 chr12 76368200 76372576 + 42.975887695453 NA promoter-TSS (NM_028356) promoter-TSS (NM_028356) 122 NM_178744 268564 Mm.77065 NM_178744 ENSMUSG00000033454 Zbtb1 9430077A12|AI256369|Bsg2|C430003J21Rik zinc finger and BTB domain containing 1 protein-coding common_peak1_89_1262_-0.949847975036565_9.82771493626927_42.9294678992858 chr17 27826317 27826999 + 42.9294678992858 NA Intergenic B2_Mm2|SINE|B2 -6116 NM_001271511 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak2_674_6096_0.344534909939767_12.7461512856264_42.9167058754908 chr11 117329998 117336935 + 42.9167058754908 NA intron (NM_001113488, intron 1 of 9) intron (NM_001113488, intron 1 of 9) 1153 NM_001113488 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_155_670_0.93599911578039_9.85816851409038_42.9146607716951 chr13 52598755 52601297 + 42.9146607716951 NA intron (NM_011518, intron 1 of 13) intron (NM_011518, intron 1 of 13) 3144 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak2_127_1736_-0.786291842026156_10.3692361176973_42.881910069295 chr3 103383323 103387010 + 42.881910069295 NA Intergenic Intergenic 105873 NM_001079830 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding common_peak2_626_5504_0.361353284226297_12.6072034905649_42.8642732247741 chr4 32136954 32142875 + 42.8642732247741 NA Intergenic Intergenic 175807 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_623_5467_0.362595166747225_12.5980951109797_42.8613021884468 chr2 166397549 166403228 + 42.8613021884468 NA Intergenic Intergenic -47063 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA unique_peak2_53_821_-1.23417470565573_9.06590723085382_42.8504726833273 chr6 117674632 117677536 + 42.8504726833273 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 75685 NR_045731 72263 Mm.443289 NR_045731 ENSMUSG00000099869 1700030F04Rik - RIKEN cDNA 1700030F04 gene ncRNA common_peak1_70_1028_-1.07386772104695_9.47009340637049_42.8093613456199 chr4 125177572 125178737 + 42.8093613456199 NA Intergenic Intergenic -50273 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak2_286_1779_0.607317848477136_11.1013204500923_42.6987181261647 chr17 27907031 27910343 + 42.6987181261647 NA promoter-TSS (NM_026836) promoter-TSS (NM_026836) -619 NM_001286040 224650 Mm.32556 NM_181413 ENSMUSG00000024219 Anks1 Anks1a|mKIAA0229 ankyrin repeat and SAM domain containing 1 protein-coding common_peak1_92_260_1.38291072431771_8.71936135872874_42.6886739554411 chr18 35118335 35119597 + 42.6886739554411 NA promoter-TSS (NM_009818) promoter-TSS (NM_009818) 54 NM_009818 12385 Mm.18962 NM_009818 ENSMUSG00000037815 Ctnna1 2010010M04Rik|AA517462|AI988031|Catna1 catenin (cadherin associated protein), alpha 1 protein-coding common_peak2_69_1014_-1.07920598636265_9.44766101889121_42.6783311910196 chr11 97702323 97704210 + 42.6783311910196 NA promoter-TSS (NM_011971) promoter-TSS (NM_011971) -168 NM_011971 26446 Mm.21874 NM_011971 ENSMUSG00000069744 Psmb3 AL033320|C10-II proteasome (prosome, macropain) subunit, beta type 3 protein-coding common_peak1_157_686_0.924545113481573_9.88643884555889_42.6734218667572 chr5 100584025 100586347 + 42.6734218667572 NA Intergenic MLT1G|LTR|ERVL-MaLR -12981 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak1_47_747_-1.30650668060919_8.89364111958304_42.6205946613006 chr6 72937414 72937997 + 42.6205946613006 NA Intergenic PB1D10|SINE|Alu 20527 NM_001039392 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding common_peak1_150_635_0.955637429701197_9.79070167013495_42.6118542007907 chr4 109475585 109476988 + 42.6118542007907 NA 5' UTR (NM_013876, exon 1 of 3) 5' UTR (NM_013876, exon 1 of 3) 219 NM_013876 29864 Mm.392580 NM_013876 ENSMUSG00000028557 Rnf11 - ring finger protein 11 protein-coding common_peak2_367_2578_0.512313991049718_11.5887530533141_42.5899203603735 chr10 96397973 96402482 + 42.5899203603735 NA Intergenic Intergenic 174020 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_821_7996_0.301841211317608_13.1161637782157_42.5453311947875 chr10 19060156 19069132 + 42.5453311947875 NA Intergenic Intergenic -49234 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_38_638_-1.44672867133913_8.59630778527743_42.5409150115318 chr7 29768276 29769155 + 42.5409150115318 NA intron (NM_023750, intron 1 of 4) intron (NM_023750, intron 1 of 4) 163 NM_023750 74352 Mm.251083 NM_023750 ENSMUSG00000046185 Zfp84 2210410P13Rik|4633401C23Rik|AI415447|BB081605|C86188|KRAB18|Zfp69 zinc finger protein 84 protein-coding common_peak2_159_2141_-0.693771603560412_10.71785696297_42.528218971809 chr1 118387468 118390379 + 42.528218971809 NA promoter-TSS (NM_029709) promoter-TSS (NM_029709) -135 NM_001293300 76707 Mm.138740 NM_029709 ENSMUSG00000064302 Clasp1 1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha CLIP associating protein 1 protein-coding common_peak2_269_1623_0.631589547719095_10.9811306910447_42.4689319755641 chr9 120034566 120040613 + 42.4689319755641 NA Intergenic Intergenic -13991 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak2_307_1981_0.577204915959291_11.2413437051661_42.4674005773768 chr1 10231409 10233908 + 42.4674005773768 NA promoter-TSS (NM_001102430) promoter-TSS (NM_001102430) 12 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak2_114_392_1.16818088871322_9.20247594661522_42.4402284165355 chr6 131386851 131389078 + 42.4402284165355 NA intron (NM_139117, intron 1 of 9) intron (NM_139117, intron 1 of 9) 486 NM_139117 56449 Mm.458000 NM_011733 ENSMUSG00000030189 Ybx3 Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR Y box protein 3 protein-coding common_peak1_154_666_0.933244840428042_9.84816537139861_42.3835534177176 chr5 123683377 123684974 + 42.3835534177176 NA intron (NM_019765, intron 1 of 23) CpG 186 NM_001291229 56430 Mm.241109 NM_019765 ENSMUSG00000049550 Clip1 1110007I12Rik|4631429H07Rik|AV017631|C81039|CLIP-170|CLIP170|CYLN1|Clip50|Rsn|mKIAA4046|restin CAP-GLY domain containing linker protein 1 protein-coding common_peak2_476_3753_0.429797862918806_12.0891118662903_42.3669574472721 chr5 140505535 140510022 + 42.3669574472721 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 2169 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_333_2237_0.545364595897922_11.4006766189254_42.329628747438 chr2 60208835 60211817 + 42.329628747438 NA intron (NM_020575, intron 1 of 9) CpG 390 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding common_peak2_253_1479_0.657441544844087_10.8601022329384_42.2883921849489 chr17 45745233 45749199 + 42.2883921849489 NA Intergenic Intergenic -13372 NM_028164 72240 Mm.482897 NM_028164 ENSMUSG00000094690 1600014C23Rik - RIKEN cDNA 1600014C23 gene protein-coding unique_peak2_25_481_-1.75746809158903_8.03415529043545_42.2733984214725 chr17 35193644 35196281 + 42.2733984214725 NA promoter-TSS (NR_105939) promoter-TSS (NR_105939) -10 NR_105939 102465588 NR_105939 ENSMUSG00000098291 Mir6973a Gm27967|mmu-mir-6973a microRNA 6973a ncRNA common_peak2_308_1993_0.574232705531827_11.2485660471641_42.2607486496922 chr19 5271973 5275039 + 42.2607486496922 NA promoter-TSS (NM_153129) promoter-TSS (NM_153129) -387 NM_153129 107975 Mm.234923 NM_153129 ENSMUSG00000024855 Pacs1 AI325977 phosphofurin acidic cluster sorting protein 1 protein-coding common_peak2_228_1260_0.705115334429953_10.6529102275432_42.2011427419032 chr14 105176071 105178034 + 42.2011427419032 NA 5' UTR (NM_134077, exon 1 of 21) 5' UTR (NM_134077, exon 1 of 21) 275 NM_134077 74213 Mm.474531 NM_134077 ENSMUSG00000022119 Rbm26 1700009P03Rik|AI447318|C230097K14Rik|C86225|MLZ-393|Pro1777|Se70-2 RNA binding motif protein 26 protein-coding common_peak1_548_4581_0.391026740048865_12.3572751133291_42.1870864746127 chr6 114891779 114895947 + 42.1870864746127 NA intron (NM_177683, intron 1 of 4) intron (NM_177683, intron 1 of 4) 27889 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_176_833_0.845757347750446_10.1267822473199_42.1839442206642 chr12 33313666 33316564 + 42.1839442206642 NA intron (NM_001033436, intron 1 of 7) intron (NM_001033436, intron 1 of 7) 12600 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_156_682_0.921733866115559_9.87660870134787_42.1452045807198 chr3 123266170 123268375 + 42.1452045807198 NA promoter-TSS (NM_027135) promoter-TSS (NM_027135) -224 NM_027135 69608 Mm.29293 NM_027135 ENSMUSG00000039234 Sec24d 2310020L09Rik|Gm1349 Sec24 related gene family, member D (S. cerevisiae) protein-coding common_peak1_42_684_-1.37423300759394_8.73284367405092_42.1449723588264 chr1 36767287 36768027 + 42.1449723588264 NA intron (NM_001289765, intron 1 of 12) intron (NM_001289765, intron 1 of 12) 723 NM_001289765 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak2_828_8098_0.298562329325598_13.1328092358279_42.1090170211866 chr17 6653669 6664314 + 42.1090170211866 NA Intergenic Intergenic -3052 NM_001166627 100040531 Mm.457987 NM_001166627 ENSMUSG00000095677 Dynlt1f 100040631|Dynlt1e dynein light chain Tctex-type 1F protein-coding common_peak2_676_6136_0.340336460592654_12.7534860984338_42.0898376159047 chr5 135535217 135545509 + 42.0898376159047 NA intron (NM_146001, intron 1 of 30) (TG)n|Simple_repeat|Simple_repeat 4759 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak2_361_2522_0.514895135686418_11.5583720588195_42.0886429817562 chr1 63112617 63116089 + 42.0886429817562 NA promoter-TSS (NM_001081436) promoter-TSS (NM_001081436) -86 NM_001114609 227195 Mm.74718 NM_001081436 ENSMUSG00000040865 Ino80d 7330405I11|A430093A21Rik|BC010584|OTTMUSG00000002594 INO80 complex subunit D protein-coding common_peak1_35_599_-1.49752101743686_8.48005818177745_42.0823128419977 chr7 100496000 100496610 + 42.0823128419977 NA intron (NM_011671, intron 2 of 7) intron (NM_011671, intron 2 of 7) 2947 NM_011671 22228 Mm.171378 NM_011671 ENSMUSG00000033685 Ucp2 Slc25a8 uncoupling protein 2 (mitochondrial, proton carrier) protein-coding common_peak1_238_1348_0.68342988114431_10.7393895735204_42.0312424444822 chr4 155219143 155222750 + 42.0312424444822 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 1589 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_291_1833_0.594765725163287_11.1381607861767_42.0102511842722 chr3 51339349 51342524 + 42.0102511842722 NA promoter-TSS (NM_023502) promoter-TSS (NM_023502) -292 NM_023502 69257 Mm.131038 NM_023502 ENSMUSG00000037174 Elf2 2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2 E74-like factor 2 protein-coding common_peak1_388_2803_0.489847379976455_11.6981943239989_41.9968376227219 chr11 53768284 53771073 + 41.9968376227219 NA promoter-TSS (NM_001159393) promoter-TSS (NM_001159393) -336 NM_001159393 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_341_2321_0.534093290024247_11.4481989018777_41.9431750558603 chr5 124013877 124020235 + 41.9431750558603 NA intron (NM_177876, intron 1 of 3) Lx10|LINE|L1 15204 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_241_1376_0.675866311686841_10.7652459999784_41.9036611416196 chr1 135146190 135148130 + 41.9036611416196 NA intron (NM_026823, intron 1 of 6) CpG 326 NM_026823 68724 Mm.174998 NM_026823 ENSMUSG00000026426 Arl8a 1110033P22Rik|Arl10b|gie2 ADP-ribosylation factor-like 8A protein-coding common_peak2_263_1574_0.636020767945308_10.9391464972473_41.8734641470308 chr10 115249564 115252526 + 41.8734641470308 NA intron (NM_025706, intron 1 of 16) intron (NM_025706, intron 1 of 16) 448 NM_025706 66687 Mm.22252 NM_025706 ENSMUSG00000020130 Tbc1d15 4432405K22Rik|AU022358|AU023730|AW557774|Ly6dl|Rab7-GAP TBC1 domain family, member 15 protein-coding common_peak2_317_4257_-0.469471641669543_11.8212244136175_41.8598918311183 chr13 55428476 55433769 + 41.8598918311183 NA Intergenic RMER4B|LTR|ERVK -4318 NM_021489 58992 Mm.42224 NM_021489 ENSMUSG00000021492 F12 FXII|HAF coagulation factor XII (Hageman factor) protein-coding common_peak2_34_586_-1.51577097858652_8.43933120381679_41.8557026222417 chr17 31563443 31564575 + 41.8557026222417 NA promoter-TSS (NR_027493) promoter-TSS (NR_027493) -764 NR_027493 18771 Mm.259295 NM_016670 ENSMUSG00000006705 Pknox1 D17Wsu76e|PREP1 Pbx/knotted 1 homeobox protein-coding common_peak2_283_1759_0.605024454695068_11.0838719408722_41.8529317856621 chr3 51558962 51561923 + 41.8529317856621 NA intron (NR_033624, intron 1 of 4) CpG 381 NM_080793 73251 Mm.192111 NM_080793 ENSMUSG00000037111 Setd7 1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717 SET domain containing (lysine methyltransferase) 7 protein-coding common_peak2_660_5941_0.34459649165859_12.7090311356647_41.8259160884776 chr17 34116736 34124179 + 41.8259160884776 NA promoter-TSS (NR_037970) promoter-TSS (NR_037970) -557 NR_037970 14312 Mm.3444 NM_010238 ENSMUSG00000024335 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg-1|Fsrg1|Nat|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 protein-coding common_peak1_548_4587_0.389138807337716_12.3582190796847_41.8108661186068 chr6 31215838 31219355 + 41.8108661186068 NA intron (NR_110469, intron 1 of 3) C-rich|Low_complexity|Low_complexity 878 NR_110470 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA unique_peak2_33_574_-1.53726957367121_8.39878335899613_41.8107646972891 chr10 118598809 118600734 + 41.8107646972891 NA Intergenic L1MB7|LINE|L1 -43246 NR_104123 103214 Mm.30529 NR_104123 Tmevpg1 AI447422 Theiler's murine encephalomyelitis virus persistence candidate gene 1 ncRNA common_peak1_581_4978_0.374444890636996_12.4688627453845_41.7981380610416 chr8 94385725 94388190 + 41.7981380610416 NA intron (NM_022331, intron 1 of 7) intron (NM_022331, intron 1 of 7) 457 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak1_32_562_-1.55967116441935_8.35715552987056_41.7791821456426 chr13 21786665 21787345 + 41.7791821456426 NA promoter-TSS (NM_001290466) promoter-TSS (NM_001290466) 213 NM_178184 319170 NM_178184 ENSMUSG00000069309 Hist1h2an - histone cluster 1, H2an protein-coding common_peak2_31_550_-1.58304293425963_8.31438704144134_41.7620974902194 chr18 69343880 69345735 + 41.7620974902194 NA promoter-TSS (NM_001083967) promoter-TSS (NM_001083967) 315 NM_013685 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak2_587_5052_0.371310910818726_12.4885799200273_41.6825974898612 chr1 36270228 36275427 + 41.6825974898612 NA intron (NM_153408, intron 1 of 3) intron (NM_153408, intron 1 of 3) 598 NM_153408 214854 Mm.389110 NM_153408 ENSMUSG00000047180 Neurl3 2010300P06Rik|Lincr neuralized E3 ubiquitin protein ligase 3 protein-coding common_peak2_330_2215_0.543650078612881_11.3855672053556_41.6278378240695 chr14 25377572 25379815 + 41.6278378240695 NA Intergenic Intergenic -80492 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_493_3956_0.415790079685378_12.1580863898154_41.5993494736884 chr13 103918485 103922160 + 41.5993494736884 NA 5' UTR (NM_001005868, exon 1 of 27) 5' UTR (NM_001005868, exon 1 of 27) 264 NM_001289473 59079 Mm.277354 NM_021563 ENSMUSG00000021709 Erbin 1700028E05Rik|Erbb2ip|mKIAA1225 Erbb2 interacting protein protein-coding common_peak2_623_5489_0.356802260460725_12.6009915641229_41.5955083213514 chr8 128642320 128653256 + 41.5955083213514 NA Intergenic Intergenic -37866 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_442_3388_0.446508725641943_11.949898284305_41.4984826215522 chr3 94951283 94955403 + 41.4984826215522 NA Intergenic Intergenic -1672 NM_017395 53970 Mm.24308 NM_017395 ENSMUSG00000005774 Rfx5 - regulatory factor X, 5 (influences HLA class II expression) protein-coding common_peak2_254_1496_0.647917857947361_10.8718174350321_41.4760643663176 chr8 46751729 46756860 + 41.4760643663176 NA intron (NM_008391, intron 1 of 8) intron (NM_008391, intron 1 of 8) 14549 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak2_393_2862_0.482406972812301_11.7245154414055_41.4725074168439 chr10 122984725 122987019 + 41.4725074168439 NA promoter-TSS (NR_029527) promoter-TSS (NR_029527) -148 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA common_peak1_226_1249_0.702232367438283_10.6388285632686_41.4575127147847 chr14 105176128 105177867 + 41.4575127147847 NA 5' UTR (NM_134077, exon 1 of 21) 5' UTR (NM_134077, exon 1 of 21) 330 NM_134077 74213 Mm.474531 NM_134077 ENSMUSG00000022119 Rbm26 1700009P03Rik|AI447318|C230097K14Rik|C86225|MLZ-393|Pro1777|Se70-2 RNA binding motif protein 26 protein-coding common_peak2_158_701_0.904549061291837_9.90760175095048_41.444885045823 chr1 143776481 143778357 + 41.444885045823 NA promoter-TSS (NM_013835) promoter-TSS (NM_013835) 141 NM_019562 56207 Mm.261004 NM_019562 ENSMUSG00000018189 Uchl5 5830413B11Rik|Uch37 ubiquitin carboxyl-terminal esterase L5 protein-coding common_peak1_21_427_-1.8816692437072_7.80063236454755_41.4338395604698 chr5 148867374 148867810 + 41.4338395604698 NA Intergenic Intergenic 61055 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak1_26_487_-1.70852977072329_8.07647245220124_41.3887397905203 chr11 118225902 118226469 + 41.3887397905203 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -13443 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak2_426_3216_0.456555339659703_11.8797778904826_41.3793151577232 chr19 56755176 56759905 + 41.3793151577232 NA Intergenic (GA)n|Simple_repeat|Simple_repeat 35168 NM_007419 11554 Mm.46797 NM_007419 ENSMUSG00000035283 Adrb1 Adrb-1|beta-AR adrenergic receptor, beta 1 protein-coding common_peak1_574_4902_0.375222931564464_12.4470605120679_41.3511703818138 chr5 113537168 113541575 + 41.3511703818138 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -11049 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak2_147_621_0.952237503453521_9.75688952185736_41.3398782841229 chr18 80632593 80635741 + 41.3398782841229 NA intron (NM_198429, intron 9 of 9) intron (NM_198429, intron 9 of 9) 74006 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_268_3573_-0.512964797472483_11.5468415203053_41.264165960264 chr11 70790626 70793187 + 41.264165960264 NA intron (NM_001045526, intron 4 of 4) intron (NM_001045526, intron 4 of 4) 20655 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak2_208_1098_0.741769945575511_10.472860643737_41.2417422159547 chr10 62919914 62921429 + 41.2417422159547 NA promoter-TSS (NM_175194) promoter-TSS (NM_175194) 38 NM_175194 73132 Mm.37457 NM_175194 ENSMUSG00000071253 Slc25a16 3110021G18Rik|GDA|GDC|HGT.1|ML7 solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16 protein-coding common_peak2_439_3359_0.44688243427886_11.9376867348056_41.2407560974065 chr11 21236785 21241082 + 41.2407560974065 NA promoter-TSS (NM_139061) promoter-TSS (NM_139061) -99 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak2_70_1016_-1.05694441801048_9.46163175485226_41.2347804620302 chr8 70864205 70866678 + 41.2347804620302 NA Intergenic Intergenic 8049 NM_026964 234388 Mm.295791 NM_026964 ENSMUSG00000007721 Ccdc124 1810023B24Rik coiled-coil domain containing 124 protein-coding common_peak2_532_4410_0.393558135048043_12.3036691126162_41.1889902269684 chr19 46037466 46046554 + 41.1889902269684 NA intron (NM_001113408, intron 1 of 10) intron (NM_001113408, intron 1 of 10) -2389 NM_010697 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding common_peak2_171_801_0.851493366171743_10.0732051095408_41.1859722565078 chr12 73907202 73909132 + 41.1859722565078 NA 5' UTR (NM_010431, exon 1 of 15) 5' UTR (NM_010431, exon 1 of 15) 300 NM_001313919 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding common_peak2_105_342_1.22028931045666_9.03220942140114_41.1851397101609 chr3 116711391 116712772 + 41.1851397101609 NA intron (NM_144902, intron 1 of 7) CpG 199 NM_144902 229782 Mm.190758 NM_144902 ENSMUSG00000027957 Slc35a3 2310050P13Rik solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3 protein-coding common_peak1_132_1783_-0.756999587257944_10.4224001062913_41.1805808033255 chr7 105953016 105954610 + 41.1805808033255 NA intron (NM_029000, intron 1 of 3) intron (NM_029000, intron 1 of 3) 154 NM_001243040 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak1_165_755_0.873875756133632_9.99918030228789_41.1776303889989 chr12 73907523 73909024 + 41.1776303889989 NA 5' UTR (NM_010431, exon 1 of 15) 5' UTR (NM_010431, exon 1 of 15) 406 NM_001313919 15251 Mm.3879 NM_010431 ENSMUSG00000021109 Hif1a AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78 hypoxia inducible factor 1, alpha subunit protein-coding common_peak1_148_1985_-0.710724905420753_10.600287454818_41.1714089181391 chr12 86891451 86892711 + 41.1714089181391 NA Intergenic CpG -7267 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_62_918_-1.12231189133725_9.28276510562041_41.1322300251238 chrX 42151089 42152079 + 41.1322300251238 NA intron (NM_021465, intron 1 of 32) intron (NM_021465, intron 1 of 32) 883 NM_021465 20843 Mm.290422 NM_021465 ENSMUSG00000025862 Stag2 9230105L23Rik|B230112I07Rik|SA-2|SAP2 stromal antigen 2 protein-coding common_peak2_526_4342_0.39593820987484_12.2824453423913_41.1314695491665 chr1 80753956 80759431 + 41.1314695491665 NA intron (NM_175291, intron 1 of 55) URR1B|DNA|hAT-Charlie 1860 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak2_177_848_0.830009936397506_10.1446257117518_41.098939300895 chr11 57800814 57802696 + 41.098939300895 NA promoter-TSS (NR_131042) promoter-TSS (NR_131042) 118 NM_001081168 50724 Mm.340083 NM_001081168 ENSMUSG00000020519 Sap30l 2310079P12Rik|AF006998|L55 SAP30-like protein-coding common_peak1_44_701_-1.32914858273993_8.7907529289346_41.080774875682 chr13 114916089 114917056 + 41.080774875682 NA intron (NM_008396, intron 1 of 29) B3A|SINE|B2 15469 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_130_504_1.03694768420772_9.49861341974302_41.0430102025328 chr13 33027372 33029229 + 41.0430102025328 NA intron (NM_011452, intron 1 of 6) intron (NM_011452, intron 1 of 6) 886 NM_011452 20706 Mm.45371 NM_011452 ENSMUSG00000021403 Serpinb9b 1600019A21Rik|R86|SPI-CI|Spi10|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9b protein-coding common_peak1_74_1063_-1.02513272721152_9.54271607189543_41.0349983757937 chr6 122283932 122285031 + 41.0349983757937 NA Intergenic Intergenic -1648 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak2_78_1111_-0.99684198161019_9.62052008191841_41.025720726987 chr3 60468171 60471082 + 41.025720726987 NA Intergenic L1MB4|LINE|L1 -3204 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_85_1196_-0.952867955503198_9.7487734591919_40.9987797378003 chr2 120026453 120027427 + 40.9987797378003 NA promoter-TSS (NM_001114637) promoter-TSS (NM_001114637) -543 NR_104353 102238433 Mm.41467 NR_104353 ENSMUSG00000033852 Gm28042 Jmjd7-pla2g4b predicted gene, 28042 ncRNA common_peak1_340_2322_0.52829017905335_11.4459185283355_40.9834809632716 chr2 29665664 29670703 + 40.9834809632716 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 48463 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_212_1134_0.728817479822023_10.5128853220893_40.9117360446862 chr10 115250004 115251465 + 40.9117360446862 NA intron (NM_025706, intron 1 of 16) intron (NM_025706, intron 1 of 16) 759 NM_025706 66687 Mm.22252 NM_025706 ENSMUSG00000020130 Tbc1d15 4432405K22Rik|AU022358|AU023730|AW557774|Ly6dl|Rab7-GAP TBC1 domain family, member 15 protein-coding common_peak2_202_1051_0.753280434485736_10.4155592065352_40.8328892363975 chr2 4558679 4561582 + 40.8328892363975 NA 5' UTR (NM_001177844, exon 1 of 12) 5' UTR (NM_001177844, exon 1 of 12) 376 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_169_788_0.854372669025389_10.0510678245262_40.7953001375391 chr7 122309321 122312130 + 40.7953001375391 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 21600 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak1_992_10370_0.261259371831798_13.4708970748995_40.7722522940912 chr9 109049433 109056390 + 40.7722522940912 NA intron (NM_025858, intron 3 of 5) intron (NM_025858, intron 3 of 5) -1955 NM_026381 66940 Mm.196533 NM_025858 ENSMUSG00000025647 Shisa5 2310008D10Rik|6430628I05Rik|Scotin|mShisa5 shisa family member 5 protein-coding common_peak1_63_927_-1.10850310962969_9.30372944031273_40.7622302885939 chr1 193263158 193263992 + 40.7622302885939 NA intron (NM_008288, intron 1 of 6) intron (NM_008288, intron 1 of 6) 470 NM_008288 15483 Mm.28328 NM_008288 ENSMUSG00000016194 Hsd11b1 - hydroxysteroid 11-beta dehydrogenase 1 protein-coding common_peak2_422_3181_0.455681999401538_11.8635591200318_40.7453956115908 chr4 46595844 46603097 + 40.7453956115908 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) 2459 NM_001164804 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak2_251_1476_0.646379671559703_10.8516439465446_40.6970119854631 chr15 102457893 102461819 + 40.6970119854631 NA intron (NM_025385, intron 2 of 4) intron (NM_025385, intron 2 of 4) 686 NM_025385 66151 Mm.393955 NM_025385 ENSMUSG00000023048 Prr13 1110020C13Rik|2010324E22Rik proline rich 13 protein-coding unique_peak2_18_387_-1.99954863879024_7.60013852279201_40.6953945472798 chr12 113074265 113075324 + 40.6953945472798 NA TTS (NM_001081170) TTS (NM_001081170) 292 NM_029381 75671 Mm.23377 NM_029381 ENSMUSG00000012211 Tex22 1700028O09Rik|AV210422|Tep22 testis expressed gene 22 protein-coding common_peak2_209_2773_-0.585559530460428_11.1449723070934_40.6840190639412 chr13 34001190 34003864 + 40.6840190639412 NA promoter-TSS (NM_009068) promoter-TSS (NM_009068) 267 NM_001243192 20719 Mm.252210 NM_009254 ENSMUSG00000060147 Serpinb6a 4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6a protein-coding common_peak2_143_1917_-0.720864709586396_10.5449546502249_40.6711835944875 chr1 155038665 155043897 + 40.6711835944875 NA Intergenic ORR1D2|LTR|ERVL-MaLR 58355 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_120_1626_-0.791431691037079_10.272282690154_40.6136122069022 chr13 23745568 23746570 + 40.6136122069022 NA promoter-TSS (NM_175653) promoter-TSS (NM_175653) -548 NM_175653 319148 Mm.262517 NM_175653 ENSMUSG00000069310 Hist1h3c H3-143 histone cluster 1, H3c protein-coding common_peak1_57_853_-1.16281663392157_9.15668394265971_40.5210768969515 chr5 139199797 139200463 + 40.5210768969515 NA promoter-TSS (NM_001256117) promoter-TSS (NM_001256117) -507 NM_001256115 77053 Mm.210845 NM_024451 ENSMUSG00000036817 Sun1 4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810 Sad1 and UNC84 domain containing 1 protein-coding common_peak1_85_1192_-0.948038846254923_9.74635890456777_40.5192756809618 chr7 106214302 106215342 + 40.5192756809618 NA intron (NM_029000, intron 1 of 3).2 intron (NM_029000, intron 1 of 3).2 515 NM_001243039 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak2_488_3915_0.412813910470959_12.1415720048392_40.5172423814765 chr7 66300004 66305874 + 40.5172423814765 NA intron (NM_146191, intron 10 of 33) intron (NM_146191, intron 10 of 33) 78785 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_54_817_-1.19466601455583_9.07862402566383_40.5078724700011 chr13 23750930 23751865 + 40.5078724700011 NA promoter-TSS (NM_178203) promoter-TSS (NM_178203) 309 NM_175660 319172 Mm.423402 NM_175660 ENSMUSG00000061615 Hist1h2ab H2A.1|H2a-53 histone cluster 1, H2ab protein-coding common_peak2_781_7512_0.303631970946908_13.0269893724008_40.4941019415839 chr11 98539400 98552140 + 40.4941019415839 NA 5' UTR (NM_011771, exon 1 of 8) 5' UTR (NM_011771, exon 1 of 8) 261 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding common_peak1_959_9916_0.266029948144661_13.4087030144572_40.4852678652924 chr12 25187385 25192921 + 40.4852678652924 NA Intergenic Intergenic 60979 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_206_1087_0.739266995149739_10.4570963388252_40.4820498507354 chr10 62920014 62921435 + 40.4820498507354 NA promoter-TSS (NM_175194) promoter-TSS (NM_175194) 91 NM_175194 73132 Mm.37457 NM_175194 ENSMUSG00000071253 Slc25a16 3110021G18Rik|GDA|GDC|HGT.1|ML7 solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16 protein-coding common_peak2_297_1906_0.574448184981222_11.1843132208034_40.4762905019576 chr4 124849563 124852067 + 40.4762905019576 NA promoter-TSS (NM_153566) promoter-TSS (NM_153566) 56 NM_153566 230734 Mm.258568 NM_153566 ENSMUSG00000028889 Yrdc AV303379|BC023823|IRIP|ITIP yrdC domain containing (E.coli) protein-coding common_peak1_66_961_-1.07934938362032_9.37021839195988_40.4462981354096 chr3 87841303 87842200 + 40.4462981354096 NA Intergenic Intergenic -5004 NM_001025571 27371 Mm.86361 NM_021309 ENSMUSG00000028071 Sh2d2a Lad|Ribp|Tsad SH2 domain containing 2A protein-coding common_peak2_632_5621_0.347866116911904_12.6308007968363_40.393095711374 chr9 63703911 63712680 + 40.393095711374 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 49699 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_160_2130_-0.675317964423725_10.7196558955708_40.3775790524832 chr18 70529471 70531828 + 40.3775790524832 NA promoter-TSS (NM_001289515) promoter-TSS (NM_001289515) -328 NM_001289515 26447 Mm.244352 NM_011972 ENSMUSG00000038425 Poli Rad30b polymerase (DNA directed), iota protein-coding common_peak1_110_377_1.16167574314362_9.14308029579288_40.3741738959338 chr6 131387021 131388985 + 40.3741738959338 NA intron (NM_139117, intron 1 of 9) intron (NM_139117, intron 1 of 9) 447 NM_139117 56449 Mm.458000 NM_011733 ENSMUSG00000030189 Ybx3 Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR Y box protein 3 protein-coding common_peak1_213_1147_0.720675803866442_10.5252448286089_40.3666114767556 chr2 10079765 10081132 + 40.3666114767556 NA promoter-TSS (NM_025280) promoter-TSS (NM_025280) 62 NM_020615 11949 Mm.12677 NM_020615 ENSMUSG00000025781 Atp5c1 1700094F02Rik ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 protein-coding common_peak2_164_753_0.867004821270537_9.99192312390393_40.3620727566136 chr3 159839501 159842599 + 40.3620727566136 NA intron (NM_026582, intron 1 of 11) intron (NM_026582, intron 1 of 11) 1355 NM_026582 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|Gpr177 wntless homolog (Drosophila) protein-coding common_peak2_185_917_0.795078688660139_10.2398896877439_40.3276898554634 chr2 109890075 109891718 + 40.3276898554634 NA promoter-TSS (NM_011699) promoter-TSS (NM_011699) 18 NM_011699 22343 Mm.235300 NM_011699 ENSMUSG00000027162 Lin7c 9130007B12Rik|AI303698|AU019331|AW125731|D2Ertd520e|LIN-7-C|LIN-7C|MALS-3|Veli3 lin-7 homolog C (C. elegans) protein-coding common_peak2_67_973_-1.07101707873546_9.39226942271461_40.3138945144939 chr7 29767233 29769474 + 40.3138945144939 NA promoter-TSS (NM_023750) promoter-TSS (NM_023750) -199 NM_023750 74352 Mm.251083 NM_023750 ENSMUSG00000046185 Zfp84 2210410P13Rik|4633401C23Rik|AI415447|BB081605|C86188|KRAB18|Zfp69 zinc finger protein 84 protein-coding common_peak2_538_4495_0.385831329817609_12.3273419851297_40.2976069027391 chr11 55020860 55029180 + 40.2976069027391 NA intron (NM_013472, intron 1 of 25) RMER17C|LTR|ERVK 8451 NM_001110211 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak1_94_281_1.30891843787642_8.794010571337_40.284893307279 chr2 94010017 94011314 + 40.284893307279 NA promoter-TSS (NM_026944) promoter-TSS (NM_026944) 65 NM_026944 69113 Mm.272498 NM_026944 ENSMUSG00000040174 Alkbh3 1700108H04Rik|1810020C19Rik|Abh3|mABH3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase protein-coding common_peak2_140_578_0.969846065590067_9.66234257078427_40.2314393429545 chr13 109902214 109904478 + 40.2314393429545 NA promoter-TSS (NR_035442) promoter-TSS (NR_035442) -463 NR_035442 100316683 NR_035442 ENSMUSG00000084651 Mir1904 Mirn1904|mmu-mir-1904 microRNA 1904 ncRNA unique_peak2_27_493_-1.66180248156675_8.1174659908013_40.2236575051184 chr13 91376338 91378466 + 40.2236575051184 NA intron (NR_045161, intron 1 of 2) B1_Mm|SINE|Alu 10683 NR_045161 320297 Mm.375866 NR_045161 ENSMUSG00000097182 A830009L08Rik - RIKEN cDNA A830009L08 gene ncRNA common_peak1_33_564_-1.51195848514202_8.38612781473154_40.0973208492302 chr7 30410624 30411323 + 40.0973208492302 NA Intergenic ID4|SINE|ID -2815 NM_011662 22177 Mm.46301 NM_011662 ENSMUSG00000030579 Tyrobp DAP12|KARAP|Ly83 TYRO protein tyrosine kinase binding protein protein-coding common_peak2_534_4451_0.386838128892133_12.313656941788_40.0966528799522 chr11 107468024 107472123 + 40.0966528799522 NA 5' UTR (NM_145823, exon 1 of 10) 5' UTR (NM_145823, exon 1 of 10) 647 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_58_863_-1.14936109712164_9.18020695360265_40.0514360495229 chr1 85686535 85687513 + 40.0514360495229 NA intron (NM_013673, intron 11 of 19) intron (NM_013673, intron 11 of 19) 37036 NM_001313714 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding common_peak1_47_730_-1.27333981667399_8.87705768761544_40.0343225773742 chr9 61707447 61708031 + 40.0343225773742 NA Intergenic Intergenic 206771 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_421_3180_0.451946993785805_11.8612381534324_39.9999812124948 chr11 53768543 53772301 + 39.9999812124948 NA promoter-TSS (NM_001159396) promoter-TSS (NM_001159396) -51 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak1_30_528_-1.58044170737972_8.25690305842417_39.9958287037271 chr2 144267889 144268499 + 39.9958287037271 NA intron (NM_001199188, intron 2 of 13) intron (NM_001199188, intron 2 of 13) -1992 NR_030762 100313519 Mm.453538 NR_030762 ENSMUSG00000077714 Snord17 MBI-43 small nucleolar RNA, C/D box 17 snoRNA common_peak1_43_683_-1.33144246100559_8.7521312843831_39.9935385040769 chr1 155039575 155040475 + 39.9935385040769 NA Intergenic Intergenic 59611 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak2_120_443_1.08215097828534_9.33549135549278_39.9654720083093 chr19 36553863 36555297 + 39.9654720083093 NA promoter-TSS (NM_001163471) promoter-TSS (NM_001163471) -59 NM_001163471 226098 Mm.61107 NM_172637 ENSMUSG00000041180 Hectd2 4921524L07|A630025O09Rik|AW212605 HECT domain containing 2 protein-coding common_peak1_49_754_-1.2477053308897_8.93648016876759_39.9461943858739 chr18 38380147 38381048 + 39.9461943858739 NA Intergenic Intergenic -38378 NM_022996 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding common_peak2_252_1492_0.637843767086821_10.862920333678_39.9241830998022 chr8 119811062 119814624 + 39.9241830998022 NA intron (NM_028071, intron 3 of 3) intron (NM_028071, intron 3 of 3) 27736 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak2_608_5337_0.354250349789355_12.5592087650366_39.8827214039566 chr11 22839208 22849030 + 39.8827214039566 NA intron (NM_001169114, intron 1 of 1) intron (NM_001169114, intron 1 of 1) 15616 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding unique_peak2_22_432_-1.81976241063321_7.84834200941012_39.8773792871764 chr11 68967118 68968408 + 39.8773792871764 NA promoter-TSS (NM_028048) promoter-TSS (NM_028048) -368 NM_028048 71998 Mm.298622 NM_028048 ENSMUSG00000018740 Slc25a35 1810012H11Rik solute carrier family 25, member 35 protein-coding common_peak1_86_1199_-0.936020859830029_9.76080826058087_39.8723388544133 chr5 123149672 123151245 + 39.8723388544133 NA intron (NM_001040398, intron 6 of 16) intron (NM_001040398, intron 6 of 16) 8265 NM_001040398 208043 Mm.250391 NM_177581 ENSMUSG00000038384 Setd1b AA516740|BC035291|KMT2G|mKIAA1076 SET domain containing 1B protein-coding common_peak1_150_652_0.91758120343912_9.80972978326599_39.8275743707029 chr3 123266553 123268393 + 39.8275743707029 NA promoter-TSS (NM_027135) promoter-TSS (NM_027135) -23 NM_027135 69608 Mm.29293 NM_027135 ENSMUSG00000039234 Sec24d 2310020L09Rik|Gm1349 Sec24 related gene family, member D (S. cerevisiae) protein-coding common_peak1_77_1090_-0.991879625529389_9.59549557355891_39.8143878452607 chr15 52752499 52753820 + 39.8143878452607 NA Intergenic Intergenic 40714 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak2_434_3324_0.441764792268259_11.92002102141_39.8082413580476 chr7 25753437 25756190 + 39.8082413580476 NA promoter-TSS (NM_144922) promoter-TSS (NM_144922) -93 NM_144922 232989 Mm.254223 NM_144922 ENSMUSG00000040725 Hnrnpul1 E130317O14Rik|E1B-AP5|E1BAP5|Hnrnpul|Hnrpul1 heterogeneous nuclear ribonucleoprotein U-like 1 protein-coding common_peak2_64_933_-1.09036421937676_9.32209663002128_39.8058412477765 chr7 51861182 51862882 + 39.8058412477765 NA exon (NM_001115087, exon 1 of 1) exon (NM_001115087, exon 1 of 1) 235 NM_001115087 100040608 Mm.322643 NM_001115087 ENSMUSG00000092118 Fancf A730016A17 Fanconi anemia, complementation group F protein-coding common_peak2_59_873_-1.13622072571654_9.20337910664233_39.8000571707298 chr15 12228821 12231427 + 39.8000571707298 NA intron (NM_172958, intron 1 of 15) intron (NM_172958, intron 1 of 15) 25030 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak1_301_1952_0.563656462285117_11.2133044650293_39.7791843151516 chr1 10231683 10233851 + 39.7791843151516 NA promoter-TSS (NM_001102430) promoter-TSS (NM_001102430) -97 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak1_145_1933_-0.708440741904855_10.5631517085244_39.7685032466675 chr5 105499486 105501807 + 39.7685032466675 NA Intergenic Intergenic -18825 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak1_40_645_-1.3739470896285_8.64841680987968_39.7457576822991 chr7 110843776 110844444 + 39.7457576822991 NA intron (NM_025999, intron 1 of 5) CpG 271 NM_025999 67150 Mm.96867 NM_025999 ENSMUSG00000030788 Rnf141 2610110L04Rik|AA792898|AU022812|ZFP36|ZNF230 ring finger protein 141 protein-coding common_peak1_44_692_-1.31053290457258_8.78144508985092_39.6882736221267 chr2 122377437 122378087 + 39.6882736221267 NA Intergenic Intergenic -8844 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding common_peak2_182_2406_-0.62436645927424_10.9208371968374_39.6866741413597 chr7 105951014 105955569 + 39.6866741413597 NA intron (NM_029000, intron 1 of 3) intron (NM_029000, intron 1 of 3) 676 NM_001243040 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak2_27_490_-1.65301446429677_8.11307198216631_39.6797171270394 chr5 21736894 21737985 + 39.6797171270394 NA intron (NM_028431, intron 1 of 12) intron (NM_028431, intron 1 of 12) 279 NM_028431 73078 Mm.301655 NM_028431 ENSMUSG00000029017 Pmpcb 3110004O18Rik|MPP11|MPPB|MPPP52 peptidase (mitochondrial processing) beta protein-coding common_peak2_304_1982_0.559156075696443_11.2330470000771_39.6696783710236 chr2 30123250 30125537 + 39.6696783710236 NA 5' UTR (NM_001290503, exon 1 of 16) 5' UTR (NM_001290503, exon 1 of 16) 218 NM_178694 227693 Mm.44526 NM_178694 ENSMUSG00000039686 Zer1 C230075L19Rik|Zyg11bl zyg-11 related, cell cycle regulator protein-coding common_peak2_59_872_-1.13456909984538_9.20255329370675_39.6622364213814 chr14 55014156 55015353 + 39.6622364213814 NA promoter-TSS (NM_026890) promoter-TSS (NM_026890) -700 NM_026890 68966 Mm.21214 NM_026890 ENSMUSG00000022204 Ngdn 1500001L15Rik|Ngd|neuroguidin neuroguidin, EIF4E binding protein protein-coding common_peak2_219_1204_0.699698209641303_10.584666535938_39.629151007159 chr4 123748578 123750896 + 39.629151007159 NA intron (NM_023423, intron 1 of 4) CpG 562 NM_023423 68050 Mm.27903 NM_023423 ENSMUSG00000023075 Akirin1 6330407G11Rik akirin 1 protein-coding common_peak1_222_1230_0.692868827469946_10.6120494602194_39.6226182988844 chr8 119423368 119426153 + 39.6226182988844 NA Intergenic RSINE1|SINE|B4 -12402 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak1_39_633_-1.39059249132228_8.61304278447827_39.6170968153738 chr13 114886307 114887129 + 39.6170968153738 NA intron (NM_008396, intron 2 of 29) intron (NM_008396, intron 2 of 29) 45323 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak2_149_1981_-0.695979227710463_10.6047516333313_39.6130453516095 chr5 31200618 31203367 + 39.6130453516095 NA promoter-TSS (NM_001177901) promoter-TSS (NM_001177901) 50 NM_001177901 101023 Mm.45033 NM_175311 ENSMUSG00000043059 Zfp513 AW990386|D430028M17Rik|Znf513 zinc finger protein 513 protein-coding common_peak1_419_3164_0.450815068733828_11.8533973186826_39.6053536340932 chr11 21237359 21240298 + 39.6053536340932 NA promoter-TSS (NM_139061) promoter-TSS (NM_139061) -204 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak2_184_914_0.790261304918326_10.2327585856306_39.5988979055001 chr1 58972634 58974300 + 39.5988979055001 NA promoter-TSS (NM_172656) promoter-TSS (NM_172656) 15 NM_172406 70827 Mm.222887 NM_172406 ENSMUSG00000026028 Trak2 2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549 trafficking protein, kinesin binding 2 protein-coding common_peak1_306_2002_0.556244566087429_11.2460689888564_39.5742683242486 chr15 77804969 77808112 + 39.5742683242486 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 35635 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_115_413_1.10840097938596_9.2476874471923_39.5221393719825 chr11 54726498 54728345 + 39.5221393719825 NA intron (NM_178626, intron 3 of 5) intron (NM_178626, intron 3 of 5) 60282 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding common_peak1_20_406_-1.89141034046775_7.72317981403237_39.5200267183826 chr11 76217164 76217530 + 39.5200267183826 NA promoter-TSS (NM_021294) promoter-TSS (NM_021294) 225 NM_177367 276919 Mm.482713 NM_177367 ENSMUSG00000049396 Gemin4 4932415L08Rik|AU015359 gem (nuclear organelle) associated protein 4 protein-coding common_peak1_184_915_0.788685449992787_10.2335465130933_39.4637800218518 chr1 58972601 58974270 + 39.4637800218518 NA promoter-TSS (NM_172656) promoter-TSS (NM_172656) 47 NM_172406 70827 Mm.222887 NM_172406 ENSMUSG00000026028 Trak2 2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549 trafficking protein, kinesin binding 2 protein-coding common_peak1_153_677_0.898192388823079_9.85423765754788_39.4595175586894 chr8 20121972 20123264 + 39.4595175586894 NA Intergenic CpG 174814 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo common_peak1_211_2783_-0.573977108032905_11.1559549418323_39.4557638337697 chr9 61681422 61683082 + 39.4557638337697 NA Intergenic Intergenic 232258 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_467_3695_0.418553546717799_12.061025814775_39.416213790895 chr18 14681072 14683806 + 39.416213790895 NA intron (NM_001161371, intron 1 of 8) CpG 475 NM_001161369 268996 Mm.31761 NM_009280 ENSMUSG00000037013 Ss18 D130059H17|Ssxt|Syt SS18, nBAF chromatin remodeling complex subunit protein-coding common_peak2_531_4429_0.384033951592691_12.3051079592387_39.2914829562921 chr2 91945498 91951909 + 39.2914829562921 NA intron (NM_001166597, intron 1 of 31) intron (NM_001166597, intron 1 of 31) 1645 NM_001166597 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak2_219_1207_0.696110901433549_10.5864601900419_39.2756507483863 chr10 80115710 80118171 + 39.2756507483863 NA intron (NM_001301853, intron 1 of 8) CpG 1137 NM_001301854 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding common_peak2_810_7920_0.291776496944539_13.0973551104051_39.2477620761514 chr5 124027776 124035855 + 39.2477620761514 NA intron (NM_177876, intron 1 of 3) intron (NM_177876, intron 1 of 3) 445 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak2_464_3664_0.419324824744736_12.0492598953935_39.2311926791167 chr15 83562069 83565579 + 39.2311926791167 NA intron (NM_009775, intron 1 of 3) intron (NM_009775, intron 1 of 3) 251 NM_009775 12257 Mm.1508 NM_009775 ENSMUSG00000041736 Tspo Bzrp|IBP|PBR|Tspo1 translocator protein protein-coding common_peak2_181_2388_-0.62323378454993_10.9105742461814_39.2176649458861 chr14 54517563 54520144 + 39.2176649458861 NA Intergenic Intergenic -1383 NM_001313907 27374 Mm.196585 NM_013768 ENSMUSG00000023110 Prmt5 Jbp1|Skb1 protein arginine N-methyltransferase 5 protein-coding unique_peak2_17_368_-2.02279164418773_7.51608118396653_39.2065393169025 chr19 57094867 57096388 + 39.2065393169025 NA intron (NM_001290813, intron 6 of 20) intron (NM_001290813, intron 6 of 20) 23397 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_602_5276_0.353310464263174_12.5421575003247_39.1799655730141 chr3 96555801 96563399 + 39.1799655730141 NA exon (NM_001009935, exon 5 of 8) exon (NM_001009935, exon 5 of 8) 1643 NM_023719 56338 Mm.410189 NM_023719 ENSMUSG00000038393 Txnip 1200008J08Rik|AA682105|Hyplip1|THIF|Tbp-2|VDUP1 thioredoxin interacting protein protein-coding common_peak1_45_701_-1.2902541050247_8.81020016779221_39.1592394163842 chr4 132308464 132309389 + 39.1592394163842 NA promoter-TSS (NR_029412) promoter-TSS (NR_029412) 248 NR_029468 100039864 Mm.258912 NR_029468 ENSMUSG00000086290 Snhg12 2310005L22Rik small nucleolar RNA host gene 12 ncRNA common_peak2_661_6003_0.332296294227737_12.7178564087346_39.1524203561387 chr10 77621129 77628663 + 39.1524203561387 NA intron (NM_019803, intron 1 of 5) RSINE1|SINE|B4 2575 NM_019803 22213 Mm.458125 NM_019803 ENSMUSG00000009293 Ube2g2 1110003O05Rik|D10Xrf369|UBC7|Ubc7p ubiquitin-conjugating enzyme E2G 2 protein-coding common_peak2_110_383_1.13895566664354_9.15444033404293_39.1280881602412 chr17 21565717 21567494 + 39.1280881602412 NA promoter-TSS (NM_001002008) promoter-TSS (NM_001002008) -441 NM_001002008 381066 Mm.441097 NM_001002008 ENSMUSG00000067931 Zfp948 - zinc finger protein 948 protein-coding common_peak2_214_1166_0.705243911424922_10.5412108014198_39.1111599945713 chr8 124230762 124233328 + 39.1111599945713 NA intron (NM_139272, intron 1 of 15) CpG 651 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_315_4187_-0.45672201344478_11.8036847202084_39.1036330167049 chr9 56505578 56511425 + 39.1036330167049 NA Intergenic B2_Mm2|SINE|B2 89655 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak2_380_2756_0.477461658317138_11.6676143811688_39.0950902712967 chr5 113588002 113594949 + 39.0950902712967 NA Intergenic Intergenic 41055 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak2_491_3973_0.402426246341753_12.1575892804205_38.9878131634823 chr15 73181972 73186191 + 38.9878131634823 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 866 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_23_438_-1.76430166144326_7.89592629881373_38.9351761742621 chr16 36985152 36985734 + 38.9351761742621 NA Intergenic Lx9|LINE|L1 -6307 NM_001037321 207215 Mm.211899 NM_001037321 ENSMUSG00000047746 Fbxo40 9830003A13Rik|mKIAA1195 F-box protein 40 protein-coding common_peak2_44_687_-1.30008611713747_8.77622169613337_38.9209527629482 chr17 64332092 64333142 + 38.9209527629482 NA promoter-TSS (NM_001025309) promoter-TSS (NM_001025309) -734 NM_001025309 224938 Mm.489681 NM_144859 ENSMUSG00000024083 Pja2 AI447901|AL022700|Neurodap1|mKIAA0438 praja 2, RING-H2 motif containing protein-coding common_peak1_101_328_1.21233931457857_8.96811343102453_38.8851514123302 chr7 101836270 101838019 + 38.8851514123302 NA intron (NM_010567, intron 1 of 28) intron (NM_010567, intron 1 of 28) 680 NM_001122739 16332 Mm.476000 NM_010567 ENSMUSG00000032737 Inppl1 51C|SHIP2 inositol polyphosphate phosphatase-like 1 protein-coding common_peak1_84_1167_-0.938182711027526_9.72073320336625_38.8596614420531 chr16 92800590 92801706 + 38.8596614420531 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 24926 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_59_866_-1.12461943943777_9.19757846350295_38.8386002190788 chr11 97702552 97703680 + 38.8386002190788 NA promoter-TSS (NM_011971) promoter-TSS (NM_011971) -318 NM_011971 26446 Mm.21874 NM_011971 ENSMUSG00000069744 Psmb3 AL033320|C10-II proteasome (prosome, macropain) subunit, beta type 3 protein-coding common_peak2_80_1118_-0.961652237983515_9.64716820198464_38.7955296422463 chr7 35990170 35993571 + 38.7955296422463 NA Intergenic L1ME1|LINE|L1 -188881 NM_177739 668501 Mm.286296 NM_177739 ENSMUSG00000044452 Zfp507 1810022O10Rik|A230056M16Rik|AL024009|AU021817|BB105092|Gm480|Znf507|mKIAA1084 zinc finger protein 507 protein-coding common_peak2_948_9806_0.261727778972038_13.3904600519744_38.7229685182045 chr19 4293263 4306894 + 38.7229685182045 NA intron (NM_001290818, intron 1 of 20) intron (NM_001290818, intron 1 of 20) 6144 NM_130863 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak2_777_7497_0.297440214885343_13.0210102177308_38.7194687853403 chr4 152184351 152192005 + 38.7194687853403 NA intron (NM_001146057, intron 1 of 8) RLTR31D_MM|LTR|ERVK 2044 NM_001146057 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak1_176_2317_-0.629003929811363_10.8641628861008_38.6742366020301 chr1 40500208 40502348 + 38.6742366020301 NA TTS (NM_008365) TTS (NM_008365) -14084 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_34_567_-1.46830140498115_8.41559641701411_38.6467666977769 chr8 94413711 94414329 + 38.6467666977769 NA Intergenic Intergenic 21083 NR_015514 320377 Mm.486022 NR_015514 9330175E14Rik A630085K21 RIKEN cDNA 9330175E14 gene ncRNA common_peak2_971_10128_0.257497092929546_13.4349526750541_38.6367298260848 chr4 134091846 134102096 + 38.6367298260848 NA Intergenic Intergenic -1898 NM_013706 23833 Mm.24130 NM_013706 ENSMUSG00000000682 Cd52 AI463198|B7|B7-Ag|CAMPATH-1|CLS1|MB7 CD52 antigen protein-coding common_peak1_71_1007_-1.01936993925454_9.46759495387265_38.609199793794 chr8 122473263 122474456 + 38.609199793794 NA intron (NM_001033142, intron 1 of 5) intron (NM_001033142, intron 1 of 5) 2205 NM_001033142 68718 Mm.34356 NM_001033142 ENSMUSG00000014470 Rnf166 1110031E24Rik|AW555115|Zfp313l ring finger protein 166 protein-coding common_peak1_30_520_-1.5584573575442_8.24591088350641_38.5986974752819 chr10 41936696 41937382 + 38.5986974752819 NA intron (NM_001034858, intron 12 of 17) MER5A|DNA|hAT-Charlie 49600 NM_001013370 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding common_peak1_530_7283_-0.336719769628445_12.6621553221626_38.5760436920276 chr5 105648204 105653062 + 38.5760436920276 NA Intergenic Intergenic -49336 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_145_1920_-0.698710466093541_10.5582865706188_38.5599154061551 chr4 135158433 135161143 + 38.5599154061551 NA intron (NM_019732, intron 3 of 5) Charlie4a|DNA|hAT-Charlie 39143 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_944_9755_0.261775220187202_13.3829616528898_38.5288662513457 chr1 170970940 170983548 + 38.5288662513457 NA Intergenic Intergenic -1173 NM_010187 14130 Mm.425062 NM_010187 ENSMUSG00000026656 Fcgr2b AI528646|CD32|F630109E10Rik|Fc[g]RII|FcgRII|Fcgr2|Fcgr2a|Fcr-2|Fcr-3|Ly-17|Ly-m20|LyM-1|Lym-1|fcRII Fc receptor, IgG, low affinity IIb protein-coding common_peak2_376_2721_0.477216878083407_11.6490597905457_38.5201577589233 chr11 44468640 44472401 + 38.5201577589233 NA promoter-TSS (NM_024475) promoter-TSS (NM_024475) 28 NM_024475 79560 Mm.338784 NM_024475 ENSMUSG00000041231 Ublcp1 4930527B16Rik|8430435I17Rik|BC002236 ubiquitin-like domain containing CTD phosphatase 1 protein-coding common_peak1_48_732_-1.24079315122313_8.89727281252225_38.5003587409269 chr11 97699862 97701129 + 38.5003587409269 NA promoter-TSS (NM_009545) promoter-TSS (NM_009545) 2 NM_009545 22658 Mm.2418 NM_009545 ENSMUSG00000018537 Pcgf2 Mel18|Rnf110|Zfp144|mel-18 polycomb group ring finger 2 protein-coding common_peak2_472_3765_0.410291298767572_12.083962933998_38.5002393551154 chr15 76615383 76619086 + 38.5002393551154 NA promoter-TSS (NM_028064) promoter-TSS (NM_028064) -382 NM_028064 72027 Mm.276829 NM_028064 ENSMUSG00000063354 Slc39a4 1600025H15Rik|AU041686|AWMS2|ZIP4 solute carrier family 39 (zinc transporter), member 4 protein-coding common_peak2_740_7020_0.306042821955222_12.9304822236474_38.485160778378 chr6 41546564 41557217 + 38.485160778378 NA Intergenic Intergenic 30114 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak1_63_910_-1.08182935830417_9.29039256464997_38.4798972879738 chr19 8966098 8966911 + 38.4798972879738 NA promoter-TSS (NM_026007) promoter-TSS (NM_026007) -537 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding common_peak1_377_2733_0.475558459685359_11.6545767574487_38.4442737379556 chr2 32153752 32157566 + 38.4442737379556 NA intron (NM_001159634, intron 1 of 31) B3A|SINE|B2 4511 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak2_59_863_-1.11961875837941_9.19507812297377_38.4289097468411 chr6 124829053 124830439 + 38.4289097468411 NA promoter-TSS (NM_013538) promoter-TSS (NM_013538) -299 NM_013700 22225 Mm.3571 NM_013700 ENSMUSG00000038429 Usp5 AA407472|ISOT|ISOT-1|Ucht ubiquitin specific peptidase 5 (isopeptidase T) protein-coding common_peak1_327_2222_0.522987965597505_11.3797862158257_38.3868849937249 chr6 47453569 47455533 + 38.3868849937249 NA intron (NM_012042, intron 1 of 21) CpG 227 NM_012042 26965 Mm.87611 NM_012042 ENSMUSG00000029686 Cul1 - cullin 1 protein-coding common_peak2_109_380_1.13425614207895_9.1407752585328_38.3564922534237 chr1 91022153 91024111 + 38.3564922534237 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) 24405 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_795_7742_0.291529489405004_13.0644416715176_38.3272014498908 chr15 77831294 77837934 + 38.3272014498908 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 7561 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_90_1235_-0.899117985184327_9.82190403531221_38.3219207716971 chr3 106785313 106786441 + 38.3219207716971 NA intron (NM_007651, intron 1 of 7) Lx9|LINE|L1 4272 NM_007651 12508 Mm.316861 NM_007651 ENSMUSG00000040747 Cd53 AI323659|Ox-44|Tspan25 CD53 antigen protein-coding unique_peak2_38_612_-1.38679981408292_8.56634335664932_38.3054601834353 chrX 74248624 74250605 + 38.3054601834353 NA Intergenic Intergenic -3080 NM_001290421 192176 Mm.295533 NM_010227 ENSMUSG00000031328 Flna ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1 filamin, alpha protein-coding common_peak2_565_4847_0.363580417156168_12.424964192051_38.3040729752179 chr15 80217665 80225618 + 38.3040729752179 NA Intergenic B2_Mm2|SINE|B2 -12439 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak1_43_672_-1.30805264073001_8.74043637424531_38.2946766745579 chr17 64332163 64332993 + 38.2946766745579 NA promoter-TSS (NM_001025309) promoter-TSS (NM_001025309) -695 NM_001025309 224938 Mm.489681 NM_144859 ENSMUSG00000024083 Pja2 AI447901|AL022700|Neurodap1|mKIAA0438 praja 2, RING-H2 motif containing protein-coding common_peak2_250_1490_0.625732938530556_10.8549310115487_38.2678262880416 chr4 32334083 32338034 + 38.2678262880416 NA Intergenic Intergenic -81377 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_302_1978_0.55042681271123_11.2257693034031_38.2214072751177 chr19 7493877 7496079 + 38.2214072751177 NA intron (NM_146091, intron 1 of 12) CpG 540 NM_146091 109168 Mm.264016 NM_146091 ENSMUSG00000024759 Atl3 4633402C03Rik|5730596K20Rik|AI465397|AW228836 atlastin GTPase 3 protein-coding common_peak1_41_648_-1.33798771301428_8.673080811492_38.219628391145 chr3 135437399 135438102 + 38.219628391145 NA intron (NR_030689, intron 1 of 2) intron (NR_030689, intron 1 of 2) 915 NR_030689 319587 Mm.358971 NR_030689 ENSMUSG00000097032 4930539J05Rik 8030475D13Rik RIKEN cDNA 4930539J05 gene ncRNA common_peak2_139_583_0.944845778016228_9.66224744788813_38.1827133016742 chr11 54726673 54729502 + 38.1827133016742 NA intron (NM_178626, intron 3 of 5) intron (NM_178626, intron 3 of 5) 59616 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding common_peak2_97_1319_-0.862833666148775_9.93490538117143_38.1824193402567 chr7 28436449 28438014 + 38.1824193402567 NA promoter-TSS (NM_022024) promoter-TSS (NM_022024) -216 NM_022024 63986 Mm.194536 NM_022024 ENSMUSG00000060791 Gmfg 0610039G16Rik|2310057N07Rik|AI324845 glia maturation factor, gamma protein-coding common_peak1_600_5270_0.349072589194803_12.5383972713269_38.1751607710566 chr15 78525093 78530273 + 38.1751607710566 NA intron (NM_028331, intron 1 of 2) intron (NM_028331, intron 1 of 2) 1968 NM_001204153 72709 Mm.34776 NM_028331 ENSMUSG00000022440 C1qtnf6 2810036M19Rik|CTRP6 C1q and tumor necrosis factor related protein 6 protein-coding common_peak2_353_2488_0.494922717400428_11.5288118736812_38.1633440774393 chr5 142439164 142442925 + 38.1633440774393 NA intron (NM_199068, intron 2 of 8) intron (NM_199068, intron 2 of 8) -22887 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding common_peak1_103_344_1.17819331534811_9.01954920933959_38.1497490671169 chr3 116711537 116712851 + 38.1497490671169 NA promoter-TSS (NM_144902) promoter-TSS (NM_144902) 86 NM_144902 229782 Mm.190758 NM_144902 ENSMUSG00000027957 Slc35a3 2310050P13Rik solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3 protein-coding common_peak2_246_1455_0.631574478273027_10.8235818793352_38.1410666220692 chr16 10974727 10978086 + 38.1410666220692 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 16715 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak2_1029_10958_0.246437242758242_13.5430471604623_38.1402584243897 chr8 120485491 120494109 + 38.1402584243897 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) 934 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_95_1294_-0.871736292109109_9.90286823651936_38.0985069009151 chr17 7925281 7926933 + 38.0985069009151 NA 5' UTR (NM_145968, exon 1 of 10) 5' UTR (NM_145968, exon 1 of 10) 107 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding common_peak1_110_1478_-0.806488169734372_10.1271622522319_38.0961290673728 chr10 30802367 30803788 + 38.0961290673728 NA promoter-TSS (NM_172495) promoter-TSS (NM_172495) 30 NM_172495 211329 Mm.297903 NM_172495 ENSMUSG00000039697 Ncoa7 9030406N13Rik nuclear receptor coactivator 7 protein-coding common_peak1_78_1087_-0.965363750137023_9.60478096618183_38.0746200933903 chr8 11554735 11555972 + 38.0746200933903 NA promoter-TSS (NM_001302460) promoter-TSS (NM_001302460) -409 NM_001302458 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding common_peak1_99_320_1.21281032738679_8.9328346508157_38.0293103422362 chr19 23273153 23274081 + 38.0293103422362 NA intron (NM_001252684, intron 1 of 24) CpG 280 NM_153808 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding common_peak1_71_1002_-1.0121959063668_9.46400793742878_37.9769280311561 chrX 96095919 96097192 + 37.9769280311561 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 510 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_42_657_-1.31621660348129_8.7038354719946_37.9104210853041 chr1 97622694 97623581 + 37.9104210853041 NA Intergenic Intergenic 38881 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak2_369_2656_0.47891903678558_11.6150420308833_37.9053858397303 chr1 160043633 160048174 + 37.9053858397303 NA intron (NM_001162896, intron 1 of 2) intron (NM_001162896, intron 1 of 2) 1523 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding common_peak2_79_1098_-0.957616820945743_9.62316726047636_37.8912845457136 chr8 34107193 34109166 + 37.8912845457136 NA promoter-TSS (NM_001293758) promoter-TSS (NM_001293758) -365 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak1_69_156_1.61343727681826_8.10133938730076_37.8806129691427 chr3 34019297 34020069 + 37.8806129691427 NA promoter-TSS (NM_001113188) promoter-TSS (NM_001113188) -396 NM_001113189 14359 Mm.259021 NM_008053 ENSMUSG00000027680 Fxr1 1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p fragile X mental retardation gene 1, autosomal homolog protein-coding common_peak1_460_3640_0.413514828711868_12.0368764398004_37.8758717152465 chr18 14681450 14683690 + 37.8758717152465 NA intron (NM_001161371, intron 1 of 8) CpG 344 NM_001161369 268996 Mm.31761 NM_009280 ENSMUSG00000037013 Ss18 D130059H17|Ssxt|Syt SS18, nBAF chromatin remodeling complex subunit protein-coding common_peak1_50_752_-1.20883527754447_8.95208841589969_37.873094871423 chr13 92353991 92354609 + 37.873094871423 NA promoter-TSS (NM_010049) promoter-TSS (NM_010049) -483 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding unique_peak1_56_97_1.92978887543496_7.57960428183269_37.8633872164142 chr5 73231642 73232862 + 37.8633872164142 NA intron (NM_028194, intron 1 of 62) intron (NM_028194, intron 1 of 62) 24366 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_93_1267_-0.878595631527032_9.86904121437589_37.7973293633931 chr7 28436633 28437770 + 37.7973293633931 NA promoter-TSS (NM_022024) promoter-TSS (NM_022024) -246 NM_022024 63986 Mm.194536 NM_022024 ENSMUSG00000060791 Gmfg 0610039G16Rik|2310057N07Rik|AI324845 glia maturation factor, gamma protein-coding common_peak1_300_1964_0.548949682373452_11.2147884383327_37.7664130764091 chr14 103098260 103100053 + 37.7664130764091 NA intron (NM_015822, intron 1 of 4) CpG 353 NM_015822 50789 Mm.214746 NM_015822 ENSMUSG00000022124 Fbxl3 AU041772|AW212966|FBK|Fbl3a|Fbxl3a|Ovtm|Play68 F-box and leucine-rich repeat protein 3 protein-coding common_peak2_214_2801_-0.558408483298546_11.1730369987815_37.7559208517869 chr1 51583560 51587694 + 37.7559208517869 NA Intergenic Intergenic -107228 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak1_499_4085_0.390871912654188_12.1919094450603_37.6797313721631 chr3 95657540 95660767 + 37.6797313721631 NA exon (NM_008562, exon 1 of 3) exon (NM_008562, exon 1 of 3) 432 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak1_485_3925_0.398244452866347_12.1379666838993_37.6481919201151 chr15 73182173 73185933 + 37.6481919201151 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 894 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_72_172_1.5476907987489_8.20847362701118_37.6366890030112 chr18 65432352 65433698 + 37.6366890030112 NA intron (NM_172833, intron 1 of 15) intron (NM_172833, intron 1 of 15) 2028 NM_172833 240354 Mm.132613 NM_172833 ENSMUSG00000032688 Malt1 A630046N12|D430033E09Rik|Pcasp1 MALT1 paracaspase protein-coding common_peak1_551_4692_0.366137508777598_12.3793634994171_37.6286674387359 chr2 166397601 166401267 + 37.6286674387359 NA Intergenic Intergenic -48017 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA unique_peak1_62_124_1.7558248752897_7.84369672230693_37.6223679773547 chr15 67143775 67145174 + 37.6223679773547 NA intron (NM_009177, intron 2 of 8) intron (NM_009177, intron 2 of 8) 32408 NM_009177 20442 Mm.248334 NM_009177 ENSMUSG00000013846 St3gal1 5330418N22Rik|AI467004|ST3GalI|Siat4|Siat4a|St3gal-1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding common_peak1_524_4375_0.378288794762581_12.2845414201738_37.6084545883396 chr2 91945558 91951377 + 37.6084545883396 NA intron (NM_001166597, intron 1 of 31) B1F|SINE|Alu 1881 NM_001166597 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak1_92_1253_-0.881504911914449_9.85156917684482_37.5921042874158 chr2 31081510 31082810 + 37.5921042874158 NA intron (NM_001177648, intron 6 of 16) intron (NM_001177648, intron 6 of 16) 14340 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_59_111_1.82791382172646_7.72131183292083_37.590259909867 chr5 86792366 86793538 + 37.590259909867 NA Intergenic MTC-int|LTR|ERVL-MaLR -11538 NM_177680 231386 Mm.196325 NM_177680 ENSMUSG00000035851 Ythdc1 A730098D12Rik|C80342|mKIAA1966 YTH domain containing 1 protein-coding common_peak1_51_762_-1.19350569100724_8.97878640133091_37.5785459726335 chr5 99979097 99979936 + 37.5785459726335 NA promoter-TSS (NM_007516) promoter-TSS (NM_007516) -578 NM_001077265 11991 Mm.150231 NM_007516 ENSMUSG00000000568 Hnrnpd Auf1|Hnrpd heterogeneous nuclear ribonucleoprotein D protein-coding common_peak1_334_2302_0.509350591235201_11.4239739914104_37.5621563338851 chr1 55086572 55089000 + 37.5621563338851 NA promoter-TSS (NM_008303) promoter-TSS (NM_008303) 146 NM_010477 15510 Mm.1777 NM_010477 ENSMUSG00000025980 Hspd1 60kDa|Hsp60 heat shock protein 1 (chaperonin) protein-coding common_peak2_403_3020_0.44926234725023_11.7854416423531_37.559166707589 chr2 25254327 25256741 + 37.559166707589 NA promoter-TSS (NM_177344) promoter-TSS (NM_177344) 95 NM_177344 227615 Mm.213925 NM_177344 ENSMUSG00000078201 Tmem203 C730025P13Rik|Hbebp1 transmembrane protein 203 protein-coding common_peak1_68_963_-1.03029401598317_9.39774232823838_37.5293335942271 chr2 165319755 165321201 + 37.5293335942271 NA intron (NM_080287, intron 1 of 20) intron (NM_080287, intron 1 of 20) 348 NM_001302752 140579 Mm.35064 NM_080287 ENSMUSG00000017670 Elmo2 1190002F24Rik|CED-12 engulfment and cell motility 2 protein-coding common_peak2_60_868_-1.09869291576743_9.21386590893069_37.5240842859637 chr4 114651593 114653809 + 37.5240842859637 NA Intergenic MIR|SINE|MIR -169019 NR_033617 433746 Mm.388908 NR_033617 ENSMUSG00000055198 Gm12830 OTTMUSG00000008584 predicted gene 12830 ncRNA unique_peak2_11_286_-2.37774376976995_6.97603504179071_37.5236486777294 chr3 19188117 19189063 + 37.5236486777294 NA intron (NM_026182, intron 1 of 7) intron (NM_026182, intron 1 of 7) 369 NR_045575 67472 Mm.45125 NM_026182 ENSMUSG00000027601 Mtfr1 1300002C08Rik|1700080D04Rik|2810026O10Rik|4930579E05Rik|Chppr|Fam54a2 mitochondrial fission regulator 1 protein-coding common_peak1_51_78_2.07825280765018_7.3429071520022_37.5024341284927 chr5 115531279 115532172 + 37.5024341284927 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 25049 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak1_91_1240_-0.885601973664134_9.83448641329829_37.5005810571038 chr17 7397198 7398672 + 37.5005810571038 NA Intergenic RMER10A|LTR|ERVL -12630 NM_001142539 667055 Mm.327371 NM_001142539 ENSMUSG00000056133 Gm9992 ENSMUSG00000056133 predicted gene 9992 protein-coding common_peak1_205_1103_0.709635738184929_10.4633423258706_37.4658833144804 chr11 99229505 99231407 + 37.4658833144804 NA 5' UTR (NM_020618, exon 1 of 11) 5' UTR (NM_020618, exon 1 of 11) 561 NM_020618 57376 Mm.379086 NM_020618 ENSMUSG00000037935 Smarce1 2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding common_peak1_386_2841_0.461305363317736_11.7033435209016_37.4050563063136 chr10 122984891 122986931 + 37.4050563063136 NA promoter-TSS (NR_029527) promoter-TSS (NR_029527) -187 NR_029527 387251 NR_029527 ENSMUSG00000065406 Mirlet7i Mirnlet7i|let-7i|mmu-let-7i microRNA let7i ncRNA common_peak2_97_311_1.21808632923479_8.89444538347965_37.3950327393913 chr19 34289899 34291462 + 37.3950327393913 NA promoter-TSS (NM_007987) promoter-TSS (NM_007987) 21 NM_001146708 14102 Mm.1626 NM_007987 ENSMUSG00000024778 Fas AI196731|APO1|APT1|CD95|TNFR6|Tnfrsf6|lpr Fas (TNF receptor superfamily member 6) protein-coding common_peak2_193_1004_0.738970888483474_10.342465230308_37.3812837333393 chr6 39724052 39726406 + 37.3812837333393 NA exon (NM_139294, exon 1 of 22) exon (NM_139294, exon 1 of 22) 234 NM_139294 109880 Mm.245513 NM_139294 ENSMUSG00000002413 Braf 9930012E13Rik|AA120551|AA387315|AA473386|B-raf|Braf-2|Braf2|C230098H17|C87398|D6Ertd631e Braf transforming gene protein-coding common_peak1_43_666_-1.29513289730428_8.73397650253245_37.3774820536386 chr4 126253847 126254617 + 37.3774820536386 NA intron (NM_144941, intron 1 of 16) intron (NM_144941, intron 1 of 16) 2087 NM_144941 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding common_peak1_20_395_-1.85188197628111_7.70341563193905_37.368079995907 chr16 95990511 95990920 + 37.368079995907 NA intron (NM_019537, intron 1 of 6) CpG 188 NM_019537 56088 Mm.396248 NM_019537 ENSMUSG00000022913 Psmg1 AW552102|Dscr2 proteasome (prosome, macropain) assembly chaperone 1 protein-coding common_peak2_91_276_1.27794326041703_8.75271379625771_37.346220230802 chr2 94010148 94011336 + 37.346220230802 NA promoter-TSS (NM_026944) promoter-TSS (NM_026944) -12 NM_026944 69113 Mm.272498 NM_026944 ENSMUSG00000040174 Alkbh3 1700108H04Rik|1810020C19Rik|Abh3|mABH3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase protein-coding common_peak1_24_442_-1.70514769641863_7.9385890403457_37.3400114730274 chr8 120714726 120715266 + 37.3400114730274 NA Intergenic Intergenic -21362 NM_008320 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_95_1287_-0.86391678764981_9.89895848428971_37.3209221101883 chr5 23719995 23721444 + 37.3209221101883 NA Intergenic RMER17A|LTR|ERVK -8052 NR_015554 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak2_246_1463_0.623669280187681_10.8275344783779_37.302074696625 chr18 75213911 75216631 + 37.302074696625 NA intron (NM_027727, intron 14 of 16) PB1D9|SINE|Alu 82046 NR_045394 100503117 Mm.250517 NR_045393 ENSMUSG00000102047 2010010A06Rik 5033420E22Rik RIKEN cDNA 2010010A06 gene ncRNA common_peak2_282_1796_0.568767395932822_11.0957583914764_37.2959392501266 chr5 134675547 134679302 + 37.2959392501266 NA intron (NM_010717, intron 2 of 15) intron (NM_010717, intron 2 of 15) 824 NM_001305875 16885 Mm.15409 NM_010717 ENSMUSG00000029674 Limk1 KIZ-1|LIMK-1|Limk LIM-domain containing, protein kinase protein-coding common_peak1_15_335_-2.09606415965359_7.34428534295196_37.2918575457881 chr7 80779099 80779529 + 37.2918575457881 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 24017 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_400_2992_0.449506421243441_11.7721297741198_37.2290311160696 chr5 123973266 123977417 + 37.2290311160696 NA intron (NM_145070, intron 1 of 31) intron (NM_145070, intron 1 of 31) 1713 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding common_peak1_89_1213_-0.892761757504694_9.79917182750333_37.2085891446117 chr1 34479041 34480072 + 37.2085891446117 NA Intergenic Intergenic -18874 NM_009355 21755 Mm.10725 NM_009355 ENSMUSG00000026125 Prss39 Tesp1 protease, serine 39 protein-coding common_peak1_59_854_-1.1045118659892_9.18752467677866_37.2084490699445 chr16 91444698 91445759 + 37.2084490699445 NA Intergenic Intergenic -19876 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak2_141_604_0.918980524871417_9.70028159459767_37.1247286567049 chr15 50888423 50890698 + 37.1247286567049 NA promoter-TSS (NR_035444) promoter-TSS (NR_035444) -446 NR_035444 100316685 NR_035444 ENSMUSG00000084458 Mir1907 Mirn1907|mmu-mir-1907 microRNA 1907 ncRNA common_peak2_267_1657_0.588540031026685_10.9894983070091_37.1219474067476 chr5 36838598 36841458 + 37.1219474067476 NA Intergenic Intergenic -9379 NM_008550 17160 Mm.761 NM_008550 ENSMUSG00000029119 Man2b2 mKIAA0935 mannosidase 2, alpha B2 protein-coding unique_peak1_42_46_2.49113831857631_6.80015801096579_37.0885005138613 chr6 99335221 99335901 + 37.0885005138613 NA intron (NM_053202, intron 1 of 18) intron (NM_053202, intron 1 of 18) -69046 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_301_1982_0.541663733943059_11.2243008292004_37.0411162790959 chr13 113067425 113075915 + 37.0411162790959 NA intron (NM_001281487, intron 5 of 11) intron (NM_001281487, intron 5 of 11) -25282 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak1_190_983_0.741857000647554_10.313443005663_37.003047373942 chr17 24669217 24671483 + 37.003047373942 NA intron (NM_183149, intron 1 of 11) intron (NM_183149, intron 1 of 11) 598 NM_183149 213753 Mm.219581 NM_183149 ENSMUSG00000041130 Zfp598 BC023040|Ntrap|Znf598 zinc finger protein 598 protein-coding common_peak2_73_1018_-0.986542373768048_9.49966714928179_36.9848360868402 chr7 45061713 45063318 + 36.9848360868402 NA promoter-TSS (NM_025533) promoter-TSS (NM_025533) 86 NM_025533 66394 Mm.272139 NM_025533 ENSMUSG00000003421 Nosip 2310061K06Rik|CGI-25 nitric oxide synthase interacting protein protein-coding common_peak1_86_1174_-0.90564721078651_9.74562143605911_36.9529492735871 chr5 72634892 72636238 + 36.9529492735871 NA intron (NM_007723, intron 1 of 8) intron (NM_007723, intron 1 of 8) 7187 NM_007723 12788 Mm.436652 NM_007723 ENSMUSG00000067220 Cnga1 Cncg cyclic nucleotide gated channel alpha 1 protein-coding common_peak1_44_674_-1.27256505437356_8.76246116475141_36.9474245332522 chr11 118227920 118228591 + 36.9474245332522 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -15513 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak2_116_1540_-0.772573180753641_10.203364556138_36.9195855932452 chr19 12009130 12013186 + 36.9195855932452 NA Intergenic tRNA-Leu-TTA|tRNA|tRNA 25582 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding unique_peak1_33_20_3.23783114938177_6.01123299746964_36.9023610296708 chr6 90673597 90674266 + 36.9023610296708 NA intron (NM_001134383, intron 6 of 13) B3|SINE|B2 42598 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_180_903_0.769028353061174_10.2046931389458_36.8889075582718 chr2 109890244 109891644 + 36.8889075582718 NA promoter-TSS (NM_011699) promoter-TSS (NM_011699) 66 NM_011699 22343 Mm.235300 NM_011699 ENSMUSG00000027162 Lin7c 9130007B12Rik|AI303698|AU019331|AW125731|D2Ertd520e|LIN-7-C|LIN-7C|MALS-3|Veli3 lin-7 homolog C (C. elegans) protein-coding common_peak1_65_922_-1.04625457879854_9.32705954824651_36.8441456156443 chr9 21132212 21133337 + 36.8441456156443 NA Intergenic RLTR19-int|LTR|ERVK -1499 NM_001205312 54721 Mm.20249 NM_018793 ENSMUSG00000032175 Tyk2 JTK1 tyrosine kinase 2 protein-coding common_peak2_102_1368_-0.827358847481161_10.0052273075173_36.8260828299482 chr11 97994199 97997073 + 36.8260828299482 NA intron (NM_207231, intron 1 of 5) intron (NM_207231, intron 1 of 5) 537 NM_207231 217151 Mm.277896 NM_207231 ENSMUSG00000038352 Arl5c Arl12|BC065791 ADP-ribosylation factor-like 5C protein-coding common_peak1_32_533_-1.48337598402667_8.31900793967422_36.8190004851313 chr10 127162066 127162862 + 36.8190004851313 NA Intergenic Charlie12|DNA|hAT-Charlie -2692 NR_045166 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak1_27_474_-1.60521895320039_8.08917422661812_36.8117524050281 chr19 5963653 5964229 + 36.8117524050281 NA 5' UTR (NM_001164057, exon 1 of 18) 5' UTR (NM_001164057, exon 1 of 18) 265 NM_001164057 18969 Mm.209931 NM_008893 ENSMUSG00000024833 Pola2 AI573378 polymerase (DNA directed), alpha 2 protein-coding common_peak2_83_233_1.36033454658781_8.55053199287731_36.8050474202589 chr7 132723139 132725197 + 36.8050474202589 NA intron (NM_175268, intron 4 of 4) intron (NM_175268, intron 4 of 4) 62767 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_44_673_-1.27042614361723_8.76139170937325_36.7969219418247 chr7 28792652 28793095 + 36.7969219418247 NA intron (NM_177158, intron 4 of 11) intron (NM_177158, intron 4 of 11) 3904 NM_177158 320435 Mm.74632 NM_177158 ENSMUSG00000051735 Rinl 5830482F20Rik|9930116N10Rik Ras and Rab interactor-like protein-coding common_peak1_121_467_1.02076704264992_9.38074824090837_36.7778642996538 chr5 36580858 36582072 + 36.7778642996538 NA intron (NM_001113362, intron 2 of 14) intron (NM_001113362, intron 2 of 14) 932 NM_133910 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding common_peak1_650_5911_0.324922276006909_12.6918916921496_36.7761325969478 chr10 96372197 96376962 + 36.7761325969478 NA Intergenic L1MCa|LINE|L1 148372 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_125_1650_-0.74090293377512_10.3186729380257_36.7636285498755 chr2 65186438 65190948 + 36.7636285498755 NA intron (NM_177025, intron 1 of 13) intron (NM_177025, intron 1 of 13) 49933 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak1_17_356_-1.97509490215643_7.49223281295088_36.762941197051 chr6 48707363 48707771 + 36.762941197051 NA intron (NM_153175, intron 1 of 2) intron (NM_153175, intron 1 of 2) 677 NM_153175 231931 Mm.321047 NM_153175 ENSMUSG00000047867 Gimap6 4833419H03Rik|Ian6|mFLJ00102 GTPase, IMAP family member 6 protein-coding common_peak1_72_175_1.52288740774833_8.22087532251146_36.7610938712684 chr1 24005019 24005880 + 36.7610938712684 NA intron (NM_026503, intron 1 of 2) CpG 191 NM_026503 68002 Mm.250424 NM_026503 ENSMUSG00000026154 Sdhaf4 1110058L19Rik|1700001E18Rik|C6orf57 succinate dehydrogenase complex assembly factor 4 protein-coding common_peak2_685_6352_0.313802353561723_12.7901234805817_36.7496480885867 chr2 31808369 31812857 + 36.7496480885867 NA promoter-TSS (NM_183424) promoter-TSS (NM_183424) -33 NM_183424 227717 Mm.185027 NM_183424 ENSMUSG00000043102 Qrfp P518 pyroglutamylated RFamide peptide protein-coding common_peak2_589_5162_0.34625042034514_12.5071190929339_36.739142852967 chr6 136934727 136942711 + 36.739142852967 NA intron (NM_001301301, intron 1 of 5) intron (NM_001301301, intron 1 of 5) 808 NM_001301303 11857 Mm.2241 NM_007486 ENSMUSG00000030220 Arhgdib D4|Gdid4|Ly-GDI Rho, GDP dissociation inhibitor (GDI) beta protein-coding common_peak1_37_591_-1.3824768510457_8.5182149401061_36.7374348293193 chr1 51584444 51585217 + 36.7374348293193 NA Intergenic Intergenic -106431 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak2_50_744_-1.19342583822207_8.94438369623849_36.7216849012315 chr5 114130213 114132096 + 36.7216849012315 NA promoter-TSS (NM_011677) promoter-TSS (NM_011677) -2 NM_011677 22256 Mm.1393 NM_011677 ENSMUSG00000029591 Ung UNG1|UNG2 uracil DNA glycosylase protein-coding common_peak1_87_1184_-0.897648978718959_9.76184685442614_36.6928371497555 chr19 6398678 6400279 + 36.6928371497555 NA Intergenic CpG -1105 NM_011242 19395 Mm.77017 NM_011242 ENSMUSG00000032946 Rasgrp2 CDC25L|Caldaggef1 RAS, guanyl releasing protein 2 protein-coding common_peak2_87_1184_-0.897648978718959_9.76184685442614_36.6928371497555 chr12 69515340 69517853 + 36.6928371497555 NA Intergenic Intergenic -41046 NR_038061 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak2_564_4863_0.355697571607134_12.4257762992472_36.6718005839399 chr1 88697499 88703561 + 36.6718005839399 NA 3' UTR (NM_177305, exon 1 of 1) 3' UTR (NM_177305, exon 1 of 1) 1661 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_165_786_0.815898354847217_10.0281690029311_36.6587312092439 chr1 64797515 64800358 + 36.6587312092439 NA intron (NM_001039493, intron 7 of 7) intron (NM_001039493, intron 7 of 7) -61186 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_108_1439_-0.800110860800038_10.0917976659297_36.6425931199356 chr8 70896809 70898209 + 36.6425931199356 NA promoter-TSS (NM_029751) promoter-TSS (NM_029751) -66 NM_029751 76808 Mm.379251 NM_029751 ENSMUSG00000045128 Rpl18a 2510019J09Rik ribosomal protein L18A protein-coding common_peak2_838_8353_0.275057781686328_13.165780319006_36.6239956905061 chr8 13670541 13679165 + 36.6239956905061 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 2734 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_40_625_-1.32857558186719_8.62573105599902_36.5989023504007 chr6 129587037 129588091 + 36.5989023504007 NA Intergenic Intergenic -4247 NM_010654 16643 Mm.391515 NM_010654 ENSMUSG00000030165 Klrd1 CD94 killer cell lectin-like receptor, subfamily D, member 1 protein-coding common_peak2_181_913_0.762906998848333_10.2175038544822_36.5849642041865 chr5 113156133 113158934 + 36.5849642041865 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 5780 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak2_386_2852_0.455732170978797_11.7061301170711_36.5847465866395 chr13 85287298 85291067 + 36.5847465866395 NA 5' UTR (NM_145452, exon 1 of 25) 5' UTR (NM_145452, exon 1 of 25) 304 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak2_850_8515_0.272480202472883_13.1922003356887_36.5799673248474 chr14 60730907 60739418 + 36.5799673248474 NA intron (NM_001310594, intron 1 of 9) intron (NM_001310594, intron 1 of 9) 2258 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak1_50_743_-1.19148803398057_8.94341479411774_36.5785547385317 chr15 103240441 103241135 + 36.5785547385317 NA promoter-TSS (NM_001076789) promoter-TSS (NM_001076789) 334 NR_002883 434858 Mm.391346 NR_002883 Gm5643 EG434858 heterogeneous nuclear ribonucleoprotein A1 pseudogene pseudo common_peak2_236_1380_0.634736003008552_10.7488656057623_36.5552937738927 chr2 103654890 103660532 + 36.5552937738927 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 91401 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_175_865_0.781411461526295_10.1489289454899_36.5503097451692 chr18 67932398 67934696 + 36.5503097451692 NA intron (NM_172631, intron 1 of 5) CpG 290 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_114_1511_-0.775676033249242_10.1744044075965_36.4955407979768 chr17 56073864 56075698 + 36.4955407979768 NA intron (NM_024432, intron 1 of 10) CpG 208 NM_024432 66530 Mm.28000 NM_024432 ENSMUSG00000019578 Ubxn6 1200008L11Rik|2210415J11Rik|AU040909|Ubxd1|Ubxdc2 UBX domain protein 6 protein-coding common_peak2_690_6420_0.311293755813393_12.8042291612704_36.4923714324545 chr5 32132265 32139960 + 36.4923714324545 NA promoter-TSS (NM_008037) promoter-TSS (NM_008037) -360 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_73_1014_-0.980868049674772_9.49682998723515_36.4919076228607 chr11 6443122 6444600 + 36.4919076228607 NA intron (NM_029938, intron 1 of 4) intron (NM_029938, intron 1 of 4) 582 NM_029938 77605 Mm.27624 NM_029938 ENSMUSG00000041126 H2afv C530002L11Rik|H2a.z-2|H2av H2A histone family, member V protein-coding common_peak1_676_6244_0.315168472234845_12.7660700926127_36.4555640973302 chr10 80676553 80680692 + 36.4555640973302 NA Intergenic Intergenic -2329 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak1_79_1086_-0.94177737502382_9.6152475375154_36.4552820995257 chr13 85504515 85505635 + 36.4552820995257 NA Intergenic Intergenic -215589 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak1_91_280_1.2572591062453_8.76305587334357_36.4156112737466 chr7 118491027 118492335 + 36.4156112737466 NA 5' UTR (NM_001033380, exon 1 of 1) 5' UTR (NM_001033380, exon 1 of 1) 294 NM_001033380 319622 Mm.323386 NM_001033380 ENSMUSG00000095115 Itpripl2 C130081G24|E030018N11Rik inositol 1,4,5-triphosphate receptor interacting protein-like 2 protein-coding common_peak1_53_776_-1.15295091038176_9.02529533321683_36.3919570694471 chr14 55014526 55015135 + 36.3919570694471 NA promoter-TSS (NM_026890) promoter-TSS (NM_026890) -624 NM_026890 68966 Mm.21214 NM_026890 ENSMUSG00000022204 Ngdn 1500001L15Rik|Ngd|neuroguidin neuroguidin, EIF4E binding protein protein-coding common_peak2_93_292_1.23498654419013_8.81225012651731_36.356669962553 chr7 118491049 118492463 + 36.356669962553 NA 5' UTR (NM_001033380, exon 1 of 1) 5' UTR (NM_001033380, exon 1 of 1) 219 NM_001033380 319622 Mm.323386 NM_001033380 ENSMUSG00000095115 Itpripl2 C130081G24|E030018N11Rik inositol 1,4,5-triphosphate receptor interacting protein-like 2 protein-coding unique_peak1_56_101_1.87207337757868_7.60846203076083_36.3541670035622 chr15 86085671 86086801 + 36.3541670035622 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 27509 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak2_44_670_-1.26399031863555_8.75817379688241_36.3465508101689 chr3 135437163 135438168 + 36.3465508101689 NA intron (NR_030689, intron 1 of 2) intron (NR_030689, intron 1 of 2) 1000 NR_030689 319587 Mm.358971 NR_030689 ENSMUSG00000097032 4930539J05Rik 8030475D13Rik RIKEN cDNA 4930539J05 gene ncRNA common_peak1_267_1665_0.581595637156887_10.992970503944_36.3454096728148 chr13 74807247 74809380 + 36.3454096728148 NA promoter-TSS (NM_009817) promoter-TSS (NM_009817) -353 NM_009817 12380 Mm.29163 NM_009817 ENSMUSG00000021585 Cast - calpastatin protein-coding common_peak1_725_6871_0.300799350836625_12.8969139965568_36.3425834131861 chr5 123125633 123132725 + 36.3425834131861 NA intron (NM_175092, intron 2 of 4) intron (NM_175092, intron 2 of 4) 3450 NM_175092 23912 Mm.253876 NM_175092 ENSMUSG00000029449 Rhof AI845056|AV026554|Arhf|Ifld1|Rif ras homolog family member F (in filopodia) protein-coding common_peak1_106_1411_-0.804553953915407_10.0612473963135_36.3345326344626 chr9 61370786 61371739 + 36.3345326344626 NA Intergenic CpG -1104 NM_001083928 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak1_479_3878_0.393636616811717_12.1182873689373_36.3094496898843 chr13 103918927 103921915 + 36.3094496898843 NA 5' UTR (NM_001005868, exon 1 of 27) 5' UTR (NM_001005868, exon 1 of 27) 165 NM_001289473 59079 Mm.277354 NM_021563 ENSMUSG00000021709 Erbin 1700028E05Rik|Erbb2ip|mKIAA1225 Erbb2 interacting protein protein-coding common_peak2_101_340_1.16065515928964_8.99395550866899_36.3044880161395 chr15 74708537 74709995 + 36.3044880161395 NA promoter-TSS (NM_008415) promoter-TSS (NM_008415) 56 NM_008415 16469 Mm.87052 NM_008415 ENSMUSG00000046380 Jrk - jerky protein-coding common_peak2_70_977_-1.00053110910522_9.43342510039962_36.2576240364623 chr1 75167860 75169607 + 36.2576240364623 NA promoter-TSS (NM_026846) promoter-TSS (NM_026846) -2 NM_026846 68818 Mm.32646 NM_026846 ENSMUSG00000026197 Zfand2b 1110060O18Rik|C81256 zinc finger, AN1 type domain 2B protein-coding common_peak1_31_518_-1.49672515404636_8.2712281513347_36.2447292184408 chr13 23573713 23574225 + 36.2447292184408 NA promoter-TSS (NM_178188) promoter-TSS (NM_178188) 221 NM_178195 319180 NM_178195 ENSMUSG00000069268 Hist1h2bf - histone cluster 1, H2bf protein-coding common_peak2_231_1339_0.6404829627265_10.7082587667084_36.2225410447583 chr4 132074026 132076810 + 36.2225410447583 NA promoter-TSS (NM_001128607) promoter-TSS (NM_001128607) -105 NM_001128607 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding common_peak1_822_8149_0.276651562928185_13.1309101254699_36.1676253322626 chr12 110501522 110506648 + 36.1676253322626 NA intron (NM_012023, intron 1 of 13) MER113A|DNA|hAT-Charlie 18346 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_54_786_-1.13892880712157_9.0507554219467_36.1361480368153 chr14 51063435 51064169 + 36.1361480368153 NA Intergenic Intergenic -6560 NM_001011875 497106 Mm.379740 NM_001011875 ENSMUSG00000068407 Rnase12 Rai1 ribonuclease, RNase A family, 12 (non-active) protein-coding common_peak1_64_905_-1.04645271971334_9.30014088018957_36.125615578323 chr1 75168113 75169199 + 36.125615578323 NA promoter-TSS (NM_026846) promoter-TSS (NM_026846) 10 NM_001159906 68818 Mm.32646 NM_026846 ENSMUSG00000026197 Zfand2b 1110060O18Rik|C81256 zinc finger, AN1 type domain 2B protein-coding common_peak2_361_2596_0.47318932798431_11.5792249626706_36.1113023516031 chr1 59669509 59671828 + 36.1113023516031 NA intron (NM_009460, intron 1 of 4) L1MDb|LINE|L1 166 NM_009460 22218 Mm.362118 NM_009460 ENSMUSG00000026021 Sumo1 GMP1|PIC1|SENTRIN|SMT3|SMT3H3|SMTP3|SUMO-1|Smt3C|Ubl1 small ubiquitin-like modifier 1 protein-coding common_peak2_559_4814_0.354574876538138_12.4106075209999_36.0900634002524 chr17 3079269 3085342 + 36.0900634002524 NA intron (NR_003519, intron 1 of 7) intron (NR_003519, intron 1 of 7) 1878 NR_003519 328734 Mm.335641 NR_003519 Pisd-ps2 D030013I16Rik phosphatidylserine decarboxylase, pseudogene 2 pseudo common_peak1_103_354_1.1369706526216_9.04016054070284_36.0573844540072 chr5 105636710 105638126 + 36.0573844540072 NA Intergenic ID_B1|SINE|B4 -62551 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_563_4862_0.352859349713315_12.4240605510954_36.02716210678 chr10 19008297 19016591 + 36.02716210678 NA promoter-TSS (NM_001166402) promoter-TSS (NM_001166402) -481 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_311_2091_0.522113246919988_11.2917237597069_36.0200856303619 chr14 25377600 25379190 + 36.0200856303619 NA Intergenic CpG -80790 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_218_2829_-0.54013279518033_11.1965199401291_35.9629563544421 chr7 142385777 142388432 + 35.9629563544421 NA intron (NM_009983, intron 1 of 8) intron (NM_009983, intron 1 of 8) 766 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak2_834_8315_0.27317814970791_13.1582631177123_35.9469806395703 chr2 58153222 58162301 + 35.9469806395703 NA intron (NM_139200, intron 1 of 7) intron (NM_139200, intron 1 of 7) 2361 NM_139200 227929 Mm.273905 NM_139200 ENSMUSG00000026832 Cytip A130053M09Rik|AI462064|C80816|Cbp|Cybr|Pscdbp cytohesin 1 interacting protein protein-coding common_peak2_183_2374_-0.595414060453093_10.9160047678791_35.9441636527386 chr7 3644139 3647921 + 35.9441636527386 NA intron (NM_146176, intron 1 of 17) intron (NM_146176, intron 1 of 17) 761 NM_146176 232791 Mm.358731 NM_146176 ENSMUSG00000035632 Cnot3 A930039N10Rik CCR4-NOT transcription complex, subunit 3 protein-coding common_peak2_181_918_0.755036302617368_10.2214392025977_35.9379979997353 chr8 23254868 23257836 + 35.9379979997353 NA intron (NM_020585, intron 1 of 4) intron (NM_020585, intron 1 of 4) 728 NM_020585 57437 Mm.196269 NM_020585 ENSMUSG00000015341 Golga7 AB041568|C130038N16Rik|GCP16|GOLGA3AP1|HSPC041|R75586 golgi autoantigen, golgin subfamily a, 7 protein-coding common_peak2_533_4509_0.364853477961084_12.3213384571233_35.9110708351676 chr4 101257870 101266115 + 35.9110708351676 NA intron (NM_146145, intron 1 of 24) MER20|DNA|hAT-Charlie 3290 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_321_2192_0.509919127871745_11.3536496606095_35.8963749020004 chr11 20200371 20203134 + 35.8963749020004 NA intron (NM_008996, intron 1 of 5) CpG 150 NM_008996 19324 Mm.271944 NM_008996 ENSMUSG00000020149 Rab1a Gtbp|Rab-1|Rab1|Ypt1|mKIAA3012 RAB1A, member RAS oncogene family protein-coding common_peak2_346_2445_0.484721307763968_11.4985693424094_35.8617443148096 chr9 41219234 41223843 + 35.8617443148096 NA Intergenic Lx8|LINE|L1 15383 NR_040392 78500 Mm.275715 NR_040392 ENSMUSG00000100837 1700063D05Rik - RIKEN cDNA 1700063D05 gene ncRNA common_peak1_350_2486_0.481021689697522_11.5207016370657_35.8310594544382 chr1 63112680 63115813 + 35.8310594544382 NA promoter-TSS (NM_001081436) promoter-TSS (NM_001081436) 21 NM_001081436 227195 Mm.74718 NM_001081436 ENSMUSG00000040865 Ino80d 7330405I11|A430093A21Rik|BC010584|OTTMUSG00000002594 INO80 complex subunit D protein-coding common_peak2_308_2064_0.523756333623215_11.2738042331184_35.8305404058171 chr7 99534319 99537880 + 35.8305404058171 NA intron (NM_177231, intron 1 of 15) intron (NM_177231, intron 1 of 15) 613 NM_177231 109689 Mm.260193 NM_177231 ENSMUSG00000018909 Arrb1 1200006I17Rik|AW208571|G430100A01Rik arrestin, beta 1 protein-coding common_peak2_342_2404_0.488591167518752_11.4761167624168_35.829677092882 chr3 9248952 9252185 + 35.829677092882 NA promoter-TSS (NM_177660) promoter-TSS (NM_177660) 1 NM_177660 229055 Mm.103262 NM_177660 ENSMUSG00000069114 Zbtb10 4832414A18|AU021107|RINZF zinc finger and BTB domain containing 10 protein-coding common_peak1_168_2180_-0.62296020611134_10.7792939515851_35.8180369222468 chr8 84064981 84066676 + 35.8180369222468 NA Intergenic Intergenic -1008 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding common_peak1_52_760_-1.15601087806043_8.99374720447333_35.814790403652 chr3 88553000 88553664 + 35.814790403652 NA promoter-TSS (NM_031248) promoter-TSS (NM_031248) -384 NM_033526 94232 Mm.303059 NM_033526 ENSMUSG00000008604 Ubqln4 A1Up|A1u|AI663987|CIP75|UBIN ubiquilin 4 protein-coding common_peak1_74_1021_-0.967029772647955_9.51366459461364_35.8115842256071 chr1 192606303 192607774 + 35.8115842256071 NA intron (NM_144881, intron 9 of 11) intron (NM_144881, intron 9 of 11) 164181 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak2_299_1976_0.534277174933173_11.2162357431958_35.8072369530545 chr1 127239324 127243986 + 35.8072369530545 NA intron (NM_145128, intron 1 of 17) PB1|SINE|Alu 36669 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_244_1459_0.613229170021626_10.8183672387782_35.7987953076436 chr18 75213820 75216533 + 35.7987953076436 NA intron (NM_027727, intron 14 of 16) intron (NM_027727, intron 14 of 16) 82141 NR_045394 100503117 Mm.250517 NR_045393 ENSMUSG00000102047 2010010A06Rik 5033420E22Rik RIKEN cDNA 2010010A06 gene ncRNA common_peak1_354_2528_0.476913811062099_11.5428082271943_35.7929906708276 chr1 59669916 59671742 + 35.7929906708276 NA promoter-TSS (NM_009460) promoter-TSS (NM_009460) 5 NM_009460 22218 Mm.362118 NM_009460 ENSMUSG00000026021 Sumo1 GMP1|PIC1|SENTRIN|SMT3|SMT3H3|SMTP3|SUMO-1|Smt3C|Ubl1 small ubiquitin-like modifier 1 protein-coding common_peak2_115_1517_-0.766068138530185_10.1849220061504_35.7877257813665 chr5 123149147 123152061 + 35.7877257813665 NA intron (NM_001040398, intron 6 of 16) intron (NM_001040398, intron 6 of 16) 8411 NM_001040398 208043 Mm.250391 NM_177581 ENSMUSG00000038384 Setd1b AA516740|BC035291|KMT2G|mKIAA1076 SET domain containing 1B protein-coding common_peak2_336_2344_0.49381060774089_11.4422775112732_35.7699251935162 chr13 114928919 114932938 + 35.7699251935162 NA intron (NM_008396, intron 1 of 29) intron (NM_008396, intron 1 of 29) 1113 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_286_3736_-0.462685474049849_11.6363221113558_35.7635397995424 chr12 112859361 112862521 + 35.7635397995424 NA promoter-TSS (NM_019925) promoter-TSS (NM_019925) -25 NM_019925 56696 Mm.20455 NM_019925 ENSMUSG00000021298 Gpr132 G2a G protein-coupled receptor 132 protein-coding common_peak2_203_1101_0.694986890929011_10.4534019540357_35.7481346819943 chr11 99229581 99231422 + 35.7481346819943 NA 5' UTR (NM_020618, exon 1 of 11) 5' UTR (NM_020618, exon 1 of 11) 516 NM_020618 57376 Mm.379086 NM_020618 ENSMUSG00000037935 Smarce1 2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding common_peak2_306_2045_0.525600842154807_11.2613908508227_35.7430153579771 chr1 127203732 127207577 + 35.7430153579771 NA intron (NM_145128, intron 1 of 17) intron (NM_145128, intron 1 of 17) 668 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak2_461_3683_0.40041102202137_12.047262857102_35.7379693016242 chr12 25238333 25242836 + 35.7379693016242 NA Intergenic Intergenic 111410 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_80_221_1.37192621664277_8.48037897467149_35.7138078059553 chr14 77036078 77037252 + 35.7138078059553 NA promoter-TSS (NM_175369) promoter-TSS (NM_175369) -48 NM_172488 210808 Mm.89278 NM_172488 ENSMUSG00000044350 Lacc1 9030625A04Rik laccase (multicopper oxidoreductase) domain containing 1 protein-coding common_peak2_167_809_0.795533479585579_10.0595448375648_35.6773720687596 chr3 133543118 133545464 + 35.6773720687596 NA promoter-TSS (NM_001040400) promoter-TSS (NM_001040400) 99 NM_001040400 214133 Mm.347816 NM_145989 ENSMUSG00000040943 Tet2 Ayu17-449|E130014J05Rik|mKIAA1546 tet methylcytosine dioxygenase 2 protein-coding common_peak2_96_313_1.19071761447178_8.88997955612752_35.652196349088 chr8 71294732 71297236 + 35.652196349088 NA intron (NM_001142323, intron 2 of 38) intron (NM_001142323, intron 2 of 38) 23270 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding common_peak2_953_9952_0.24970738075046_13.4057694185608_35.6484312033192 chr9 64787750 64799264 + 35.6484312033192 NA Intergenic Intergenic -17504 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak2_331_2295_0.497823564865374_11.4138187091084_35.6451326422412 chr7 80992463 80996493 + 35.6451326422412 NA intron (NM_178707, intron 1 of 9) intron (NM_178707, intron 1 of 9) 794 NM_178707 233410 Mm.29525 NM_178707 ENSMUSG00000005621 Zfp592 8430405N24|A730014M16Rik|Znf592|mKIAA0211 zinc finger protein 592 protein-coding common_peak2_188_977_0.732053021152833_10.2997171655286_35.6186858554292 chr8 85839952 85841604 + 35.6186858554292 NA promoter-TSS (NM_199446) promoter-TSS (NM_199446) 171 NM_028007 71927 Mm.61018 NM_028007 ENSMUSG00000031703 Itfg1 2310047C21Rik|AI314457|Cda08|D8Wsu49e integrin alpha FG-GAP repeat containing 1 protein-coding common_peak1_38_595_-1.3462250708543_8.54605598503501_35.6072958173881 chr10 118081567 118082430 + 35.6072958173881 NA Intergenic MTD|LTR|ERVL-MaLR -59789 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak2_129_1688_-0.718426781282133_10.3627402221603_35.5998972766721 chr17 7396952 7399830 + 35.5998972766721 NA Intergenic Intergenic -13086 NM_001142539 667055 Mm.327371 NM_001142539 ENSMUSG00000056133 Gm9992 ENSMUSG00000056133 predicted gene 9992 protein-coding common_peak2_939_9758_0.251943688914761_13.3784894522197_35.598502778909 chr1 138294959 138305536 + 35.598502778909 NA Intergenic RMER10A|LTR|ERVL 26509 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_310_2086_0.519884505974231_11.2871571381469_35.5905481554412 chr9 123935785 123942434 + 35.5905481554412 NA Intergenic Lx7|LINE|L1 29583 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding common_peak2_570_4954_0.347649165026603_12.4484939245872_35.5878208883346 chr8 72165477 72171272 + 35.5878208883346 NA intron (NM_023126, intron 1 of 7) intron (NM_023126, intron 1 of 7) 7174 NM_023126 17274 Mm.162811 NM_023126 ENSMUSG00000003037 Rab8a AA409338|Mel RAB8A, member RAS oncogene family protein-coding common_peak1_26_455_-1.61068244732515_8.02754879050217_35.5767759219599 chr14 57712447 57712928 + 35.5767759219599 NA intron (NM_015771, intron 2 of 7) intron (NM_015771, intron 2 of 7) 21731 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_17_350_-1.95064185843189_7.48000629108861_35.554422351979 chr2 91237169 91237632 + 35.554422351979 NA promoter-TSS (NM_028119) promoter-TSS (NM_028119) 254 NR_015464 606735 Mm.246808 NR_015464 ENSMUSG00000097868 A330069E16Rik - RIKEN cDNA A330069E16 gene ncRNA common_peak2_165_794_0.801307130182986_10.0354646152632_35.5483009276495 chr16 49935249 49938961 + 35.5483009276495 NA Intergenic MamRep605|LTR?|LTR? -43355 NR_045001 628951 Mm.428032 NR_045001 Gm6936 - predicted gene 6936 ncRNA common_peak2_88_1186_-0.880085850877718_9.77306129420305_35.5350507672525 chr18 38379497 38382171 + 35.5350507672525 NA Intergenic B1_Mur3|SINE|Alu -38141 NM_022996 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding common_peak2_281_1806_0.554497123901058_11.0966293528151_35.5266278106284 chr3 104816987 104821087 + 35.5266278106284 NA promoter-TSS (NM_001163440) promoter-TSS (NM_001163440) -474 NM_001163440 17454 Mm.1597 NM_008619 ENSMUSG00000002227 Mov10 C77703|Mov-10 Moloney leukemia virus 10 protein-coding common_peak2_172_849_0.777891500467485_10.1202647812588_35.5258433200795 chr5 100583305 100586320 + 35.5258433200795 NA Intergenic Intergenic -12607 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak1_55_99_1.86932087142956_7.5785166254895_35.5193847980573 chr12 84674648 84675655 + 35.5193847980573 NA Intergenic Intergenic 23656 NM_001033334 627191 Mm.152484 NM_001033334 ENSMUSG00000071234 Syndig1l DSPC1|Gm261|Tmem90a synapse differentiation inducing 1 like protein-coding common_peak1_431_3353_0.416989838020672_11.9201618925747_35.5175014281398 chr7 16045370 16048430 + 35.5175014281398 NA Intergenic Intergenic -25042 NM_001099277 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding unique_peak2_11_277_-2.33177791581777_6.95305211481462_35.5119887194014 chr4 40772742 40773737 + 35.5119887194014 NA Intergenic Intergenic -15354 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding unique_peak1_33_22_3.10658661610351_6.07685526410877_35.4676459107261 chr7 128089283 128089961 + 35.4676459107261 NA intron (NM_001082960, intron 12 of 29) C-rich|Low_complexity|Low_complexity 26982 NM_008401 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak1_496_4086_0.37986912709183_12.1867610915666_35.4499696941835 chr15 60136115 60141715 + 35.4499696941835 NA Intergenic Intergenic -122297 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_103_357_1.12483008974939_9.04623082213895_35.4462814482975 chr11 54774144 54776298 + 35.4462814482975 NA intron (NM_178626, intron 1 of 5) B4A|SINE|B4 12482 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding common_peak2_202_1095_0.694167340817511_10.4451157533693_35.4371126944126 chr1 166137003 166139435 + 35.4371126944126 NA intron (NM_021610, intron 1 of 6) intron (NM_021610, intron 1 of 6) 7759 NM_021610 59290 Mm.46357 NM_021610 ENSMUSG00000000544 Gpa33 2010310L10Rik|2210401D16Rik|BB116197 glycoprotein A33 (transmembrane) protein-coding common_peak1_202_1095_0.694167340817511_10.4451157533693_35.4371126944126 chr1 166137003 166139413 + 35.4371126944126 NA intron (NM_021610, intron 1 of 6) intron (NM_021610, intron 1 of 6) 7748 NM_021610 59290 Mm.46357 NM_021610 ENSMUSG00000000544 Gpa33 2010310L10Rik|2210401D16Rik|BB116197 glycoprotein A33 (transmembrane) protein-coding common_peak1_53_769_-1.13989475755631_9.01876725680411_35.418058094697 chr2 126495404 126496549 + 35.418058094697 NA Intergenic Intergenic -4423 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak1_43_653_-1.26673677161778_8.7197784396892_35.4137224711667 chr13 63814502 63815178 + 35.4137224711667 NA promoter-TSS (NM_023507) promoter-TSS (NM_023507) -480 NM_001013608 76251 Mm.186610 NM_023507 ENSMUSG00000021470 Ercc6l2 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278 excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 protein-coding common_peak2_111_408_1.06383233944889_9.20787320266619_35.4098574011478 chr9 14350484 14352749 + 35.4098574011478 NA Intergenic Intergenic 29626 NM_028013 71946 Mm.41423 NM_028013 ENSMUSG00000037419 Endod1 2210414F18Rik|2310067E08Rik|C85344 endonuclease domain containing 1 protein-coding common_peak2_187_971_0.731543206192951_10.2905841067023_35.3992239643658 chr4 147808763 147810506 + 35.3992239643658 NA intron (NM_001127189, intron 1 of 5) intron (NM_001127189, intron 1 of 5) 154 NM_001127189 100041677 Mm.327194 NM_001127189 ENSMUSG00000078495 Zfp984 Gm13157|OTTMUSG00000010679 zinc finger protein 984 protein-coding common_peak2_759_7333_0.287922173122611_12.984345637273_35.392253067191 chr11 83633307 83642706 + 35.392253067191 NA Intergenic L1MA4A|LINE|L1 11372 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak2_244_1463_0.609281985504962_10.8203408310365_35.3915281319252 chr1 182340244 182342678 + 35.3915281319252 NA exon (NM_175127, exon 1 of 5) exon (NM_175127, exon 1 of 5) 145 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_426_3301_0.418931155399184_11.8985899826129_35.3480662050239 chr7 25753723 25756175 + 35.3480662050239 NA promoter-TSS (NM_144922) promoter-TSS (NM_144922) -229 NM_144922 232989 Mm.254223 NM_144922 ENSMUSG00000040725 Hnrnpul1 E130317O14Rik|E1B-AP5|E1BAP5|Hnrnpul|Hnrpul1 heterogeneous nuclear ribonucleoprotein U-like 1 protein-coding common_peak1_55_792_-1.1179999944997_9.07217705845413_35.3432780172081 chr7 45062397 45062951 + 35.3432780172081 NA intron (NM_001163684, intron 1 of 8) intron (NM_001163684, intron 1 of 8) 245 NM_025533 66394 Mm.272139 NM_025533 ENSMUSG00000003421 Nosip 2310061K06Rik|CGI-25 nitric oxide synthase interacting protein protein-coding common_peak1_213_1190_0.667625032678016_10.5517702142031_35.3289633910509 chr10 80115688 80117972 + 35.3289633910509 NA exon (NM_011492, exon 1 of 10) exon (NM_011492, exon 1 of 10) 1027 NM_001301854 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding common_peak1_530_4484_0.362903167541768_12.3123438535775_35.3130237092982 chr4 155703986 155706116 + 35.3130237092982 NA 5' UTR (NM_026899, exon 1 of 5) 5' UTR (NM_026899, exon 1 of 5) 236 NM_026899 68991 Mm.294770 NM_026899 ENSMUSG00000029038 Ssu72 1190002E22Rik|1500011L16Rik|2610101M12Rik Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) protein-coding common_peak1_79_217_1.37617452522656_8.45627158739021_35.2979192068845 chr5 100820290 100821207 + 35.2979192068845 NA intron (NM_172405, intron 1 of 8) CpG 187 NM_172405 70681 Mm.486560 NM_172405 ENSMUSG00000035234 Fam175a 3830405G04Rik|5630400M01Rik|AI506069|AL024423|AV118690|Ccdc98 family with sequence similarity 175, member A protein-coding common_peak1_139_1808_-0.686306355724994_10.4778235147587_35.2723173469573 chr13 34874795 34876356 + 35.2723173469573 NA promoter-TSS (NM_013830) promoter-TSS (NM_013830) 81 NM_013830 19134 Mm.10027 NM_013830 ENSMUSG00000021413 Prpf4b 2610037H07|Prp4|Prp4k|Prpk|cbp143 pre-mRNA processing factor 4B protein-coding common_peak1_211_2728_-0.545190291458317_11.141561533545_35.2720747283295 chr10 80699379 80702155 + 35.2720747283295 NA intron (NM_172457, intron 1 of 3) intron (NM_172457, intron 1 of 3) 1053 NM_172457 208228 Mm.49309 NM_172457 ENSMUSG00000003348 Mob3a 5330417K06Rik|A630029F06|AV218468|Mobkl2a MOB kinase activator 3A protein-coding common_peak2_738_7062_0.292655473526871_12.9323931179274_35.2541245652309 chr8 3351341 3358498 + 35.2541245652309 NA intron (NM_001033378, intron 1 of 10) intron (NM_001033378, intron 1 of 10) 1504 NM_001033378 319493 Mm.234565 NM_001033378 ENSMUSG00000074497 A430078G23Rik - RIKEN cDNA A430078G23 gene protein-coding common_peak1_186_964_0.732532541946581_10.2806514031287_35.2075210015315 chr8 85840028 85841502 + 35.2075210015315 NA promoter-TSS (NM_199446) promoter-TSS (NM_199446) 184 NM_028007 71927 Mm.61018 NM_028007 ENSMUSG00000031703 Itfg1 2310047C21Rik|AI314457|Cda08|D8Wsu49e integrin alpha FG-GAP repeat containing 1 protein-coding common_peak1_42_639_-1.27620092463341_8.68382763257066_35.1635626039966 chr6 48802155 48802930 + 35.1635626039966 NA Intergenic ORR1B2-int|LTR|ERVL-MaLR -31691 NM_031247 83408 Mm.333050 NM_031247 ENSMUSG00000039264 Gimap3 2010110D23Rik|Gimap5|Ian4 GTPase, IMAP family member 3 protein-coding common_peak1_457_3648_0.398794770360047_12.0326828207645_35.1324518282585 chr15 76615556 76618470 + 35.1324518282585 NA promoter-TSS (NM_028064) promoter-TSS (NM_028064) -161 NM_028064 72027 Mm.276829 NM_028064 ENSMUSG00000063354 Slc39a4 1600025H15Rik|AU041686|AWMS2|ZIP4 solute carrier family 39 (zinc transporter), member 4 protein-coding common_peak1_722_6858_0.296203471077174_12.8918842758693_35.1239608645286 chr9 123926761 123933726 + 35.1239608645286 NA Intergenic Intergenic 38449 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding common_peak2_409_3119_0.428830849380491_11.8217457384399_35.0982043483139 chr13 24799716 24803072 + 35.0982043483139 NA promoter-TSS (NM_024473) promoter-TSS (NM_024473) -263 NM_024473 79555 Mm.266668 NM_024473 ENSMUSG00000019132 BC005537 8030460C05Rik|C78201 cDNA sequence BC005537 protein-coding common_peak2_250_3241_-0.494870894703542_11.4152329281658_35.0902832424763 chr3 93546973 93551317 + 35.0902832424763 NA Intergenic MTC|LTR|ERVL-MaLR -5972 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak1_77_1051_-0.939363228498085_9.56923737504326_35.0867224573372 chr7 80860417 80861490 + 35.0867224573372 NA Intergenic Intergenic -1155 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding unique_peak2_18_359_-1.89148889293278_7.54610864986328_35.0785050268993 chr17 87602022 87603692 + 35.0785050268993 NA Intergenic Intergenic -33122 NM_008532 17075 Mm.4259 NM_008532 ENSMUSG00000045394 Epcam CD326|EGP|EGP-2|Egp314|Ep-CAM|EpCAM1|GA733-2|Ly74|TROP1|Tacsd1|Tacstd1|gp40 epithelial cell adhesion molecule protein-coding common_peak1_123_1608_-0.732041783616427_10.2859277189152_35.0691715934454 chr1 173439635 173441126 + 35.0691715934454 NA intron (NM_001013779, intron 2 of 8) L1MA9|LINE|L1 19776 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_20_383_-1.80748785692266_7.68121857225983_35.0536124517199 chr12 86807790 86808310 + 35.0536124517199 NA Intergenic Intergenic 73681 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak2_91_286_1.22677849979054_8.77829617657095_35.0524451115892 chr15 86072809 86075234 + 35.0524451115892 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 15294 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_47_696_-1.20462706658997_8.84270131257344_35.0148130055313 chr7 28791550 28792491 + 35.0148130055313 NA intron (NM_177158, intron 3 of 11) URR1A|DNA|hAT-Charlie 3051 NM_177158 320435 Mm.74632 NM_177158 ENSMUSG00000051735 Rinl 5830482F20Rik|9930116N10Rik Ras and Rab interactor-like protein-coding common_peak2_314_2133_0.510370286005676_11.3145296038273_35.0125455994962 chr6 124729064 124733838 + 35.0125455994962 NA intron (NM_013545, intron 3 of 15) tRNA-Ala-GCY_|tRNA|tRNA 1703 NM_013545 15170 Mm.271799 NM_013545 ENSMUSG00000004266 Ptpn6 70Z-SHP|Hcph|PTPTY-42|Ptp1C|SH-PTP1|SHP-1|hcp|me protein tyrosine phosphatase, non-receptor type 6 protein-coding common_peak2_84_246_1.30327461626781_8.60000453971858_35.0063994243877 chr13 114903092 114905046 + 35.0063994243877 NA intron (NM_008396, intron 1 of 29) intron (NM_008396, intron 1 of 29) 27972 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_350_2497_0.474654720306471_11.5238851217612_34.9737436982837 chr11 94991010 94994585 + 34.9737436982837 NA exon (NM_172261, exon 1 of 10) exon (NM_172261, exon 1 of 10) 1585 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding common_peak2_561_4857_0.348057023751553_12.4201752865116_34.9684315363825 chr4 152444192 152452205 + 34.9684315363825 NA intron (NM_010598, intron 1 of 15) intron (NM_010598, intron 1 of 15) 657 NM_001252655 16498 Mm.388924 NM_010598 ENSMUSG00000028931 Kcnab2 F5|I2rf5|Kcnb3|kv-beta-2 potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein-coding common_peak1_322_2214_0.501005462548937_11.3635937147168_34.9082977851161 chr15 64100629 64104105 + 34.9082977851161 NA intron (NM_001276462, intron 24 of 27) intron (NM_001276462, intron 24 of 27) -41919 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_552_4751_0.351316079578021_12.3899771605898_34.9015396727512 chr9 32904530 32914072 + 34.9015396727512 NA intron (NR_131058, intron 3 of 3) (TG)n|Simple_repeat|Simple_repeat 19665 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak2_204_1117_0.682844379100557_10.4681266623935_34.8961934139591 chr1 161704285 161708124 + 34.8961934139591 NA Intergenic Intergenic 82291 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_50_731_-1.16802906115659_8.93168530770575_34.8750140068863 chr13 55429509 55430038 + 34.8750140068863 NA Intergenic RMER21B|LTR|ERV1 -2969 NM_021489 58992 Mm.42224 NM_021489 ENSMUSG00000021492 F12 FXII|HAF coagulation factor XII (Hageman factor) protein-coding common_peak2_100_341_1.13899567871956_8.98735035424568_34.83875530246 chr14 18330692 18332157 + 34.83875530246 NA intron (NM_009455, intron 1 of 5) CpG 420 NM_009455 22194 Mm.4429 NM_009455 ENSMUSG00000021774 Ube2e1 UbcM3|Ubce5|ubcM2 ubiquitin-conjugating enzyme E2E 1 protein-coding common_peak1_183_943_0.735654688290738_10.2504703935072_34.8263475788596 chr4 147809003 147810369 + 34.8263475788596 NA 5' UTR (NM_001127189, exon 1 of 6) 5' UTR (NM_001127189, exon 1 of 6) 102 NM_001127189 100041677 Mm.327194 NM_001127189 ENSMUSG00000078495 Zfp984 Gm13157|OTTMUSG00000010679 zinc finger protein 984 protein-coding common_peak2_72_182_1.46661918810159_8.24900943233484_34.7819756406732 chr1 24005096 24005987 + 34.7819756406732 NA promoter-TSS (NM_026503) promoter-TSS (NM_026503) 99 NM_026503 68002 Mm.250424 NM_026503 ENSMUSG00000026154 Sdhaf4 1110058L19Rik|1700001E18Rik|C6orf57 succinate dehydrogenase complex assembly factor 4 protein-coding common_peak1_132_1716_-0.701774011339774_10.3947873183322_34.7541117958196 chr3 93547239 93548777 + 34.7541117958196 NA Intergenic Intergenic -7109 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak2_106_379_1.08911481102483_9.11441301384336_34.7432715334746 chr5 105636482 105638194 + 34.7432715334746 NA Intergenic ID_B1|SINE|B4 -62631 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_370_2708_0.455733196506568_11.6314112764553_34.7255995931881 chr13 93769859 93775529 + 34.7255995931881 NA intron (NM_009712, intron 1 of 7) intron (NM_009712, intron 1 of 7) 1015 NM_009712 11881 Mm.300178 NM_009712 ENSMUSG00000042082 Arsb 1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B protein-coding common_peak1_288_1882_0.538451218954371_11.1480428940914_34.7194016842982 chr7 75700894 75703934 + 34.7194016842982 NA intron (NM_029332, intron 16 of 36) intron (NM_029332, intron 16 of 36) -145924 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_186_968_0.726564818686944_10.2836352647586_34.7124920071852 chr16 48993334 48994436 + 34.7124920071852 NA promoter-TSS (NM_172616) promoter-TSS (NM_172616) 227 NM_001110017 224170 Mm.275138 NM_027341 ENSMUSG00000064061 Dzip3 2310047C04Rik|2A-HUB|6430549P11Rik|A230104G20 DAZ interacting protein 3, zinc finger protein-coding common_peak1_149_678_0.849494255231292_9.83201489186038_34.7103369889306 chr5 8659675 8661304 + 34.7103369889306 NA intron (NM_011076, intron 1 of 27) CpG 397 NM_011076 18671 Mm.207354 NM_011076 ENSMUSG00000040584 Abcb1a Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3 ATP-binding cassette, sub-family B (MDR/TAP), member 1A protein-coding common_peak2_494_4076_0.376267809203936_12.1814261460905_34.6727064082219 chr11 115160477 115165445 + 34.6727064082219 NA promoter-TSS (NM_012030) promoter-TSS (NM_012030) -380 NM_012030 26941 Mm.27842 NM_012030 ENSMUSG00000020733 Slc9a3r1 EBP-50|NHE-RF|NHERF-1|NHERF1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 protein-coding common_peak1_173_2230_-0.604064656391932_10.8214424700482_34.6420267179572 chr5 124482211 124483980 + 34.6420267179572 NA promoter-TSS (NM_029532) promoter-TSS (NM_029532) -60 NM_029532 76167 Mm.156035 NM_029532 ENSMUSG00000029402 Snrnp35 6330548G22Rik small nuclear ribonucleoprotein 35 (U11/U12) protein-coding common_peak1_182_936_0.73674872954107_10.2402796024297_34.6349550166093 chr13 93302999 93305002 + 34.6349550166093 NA promoter-TSS (NM_147176) promoter-TSS (NM_147176) -495 NM_147176 26556 Mm.37533 NM_011982 ENSMUSG00000007617 Homer1 PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1 homer scaffolding protein 1 protein-coding common_peak1_191_1010_0.712045119748149_10.3375898417771_34.6323497140991 chr14 25492144 25494508 + 34.6323497140991 NA intron (NM_001310666, intron 1 of 23) (TCTG)n|Simple_repeat|Simple_repeat 34141 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_114_1492_-0.757432059162712_10.1652824205532_34.5925719193904 chr2 166552520 166555388 + 34.5925719193904 NA Intergenic Intergenic 106503 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak2_535_4555_0.356828602000681_12.3319663327085_34.5797040212648 chr4 155703773 155706566 + 34.5797040212648 NA 5' UTR (NM_026899, exon 1 of 5) 5' UTR (NM_026899, exon 1 of 5) 354 NM_026899 68991 Mm.294770 NM_026899 ENSMUSG00000029038 Ssu72 1190002E22Rik|1500011L16Rik|2610101M12Rik Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) protein-coding common_peak1_118_1541_-0.743514679675391_10.2188297100773_34.5726893551451 chr7 66233496 66235092 + 34.5726893551451 NA Intergenic Lx5|LINE|L1 124779 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_171_849_0.767632761601599_10.1151354118259_34.5150485517801 chr18 67932473 67934572 + 34.5150485517801 NA intron (NM_172631, intron 1 of 5) CpG 265 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak2_455_3635_0.396199168915135_12.0262360686517_34.5144253034131 chr3 69200427 69207459 + 34.5144253034131 NA Intergenic MLT1I|LTR|ERVL-MaLR -18476 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding common_peak1_21_391_-1.75491210142126_7.73725379340458_34.5024413074075 chr6 48679303 48679770 + 34.5024413074075 NA TTS (NM_174960) TTS (NM_174960) 3401 NM_174960 317758 Mm.116971 NM_174960 ENSMUSG00000051124 Gimap9 A630002K24|BB145400 GTPase, IMAP family member 9 protein-coding common_peak2_673_6246_0.306847311764471_12.7623714704477_34.4948025911881 chr11 115151961 115160470 + 34.4948025911881 NA intron (NM_021411, intron 1 of 8) intron (NM_021411, intron 1 of 8) 2037 NM_021411 58222 Mm.143789 NM_021411 ENSMUSG00000020732 Rab37 B230331O03Rik|B230354I04Rik RAB37, member RAS oncogene family protein-coding common_peak1_40_611_-1.29594457762723_8.60941555387904_34.4429750822586 chr7 3444065 3444811 + 34.4429750822586 NA Intergenic B3|SINE|B2 19776 NM_133183 54378 Mm.424047 NM_133183 ENSMUSG00000078815 Cacng6 2310033H20Rik calcium channel, voltage-dependent, gamma subunit 6 protein-coding common_peak1_47_692_-1.19632376285876_8.83854966070783_34.4382937318674 chr18 12167859 12168570 + 34.4382937318674 NA promoter-TSS (NM_029623) promoter-TSS (NM_029623) -516 NM_029623 76482 Mm.196596 NM_029623 ENSMUSG00000024410 3110002H16Rik 2400010D15Rik|Mic-1|Mic1 RIKEN cDNA 3110002H16 gene protein-coding common_peak2_116_1515_-0.748976072409947_10.1915660019661_34.432301093108 chr11 33931249 33933859 + 34.432301093108 NA intron (NM_001190886, intron 1 of 7) intron (NM_001190886, intron 1 of 7) -30459 NM_031169 16533 Mm.6206 NM_031169 ENSMUSG00000020155 Kcnmb1 BKbeta1 potassium large conductance calcium-activated channel, subfamily M, beta member 1 protein-coding common_peak2_239_1428_0.607703165060956_10.7846417836263_34.4223723234545 chr6 125491998 125495345 + 34.4223723234545 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 1084 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak2_328_2280_0.491216465379349_11.4010589640018_34.4047394043602 chr17 37269365 37272150 + 34.4047394043602 NA exon (NM_013819, exon 2 of 8) exon (NM_013819, exon 2 of 8) 523 NM_013819 14991 Mm.14437 NM_013819 ENSMUSG00000016206 H2-M3 H-2M3|Hmt|M3a|MuprM3|MuprM301|MuprM302|R4B2 histocompatibility 2, M region locus 3 protein-coding common_peak1_857_8662_0.262286171972249_13.2117940879359_34.3809226750476 chr11 74829104 74833439 + 34.3809226750476 NA 5' UTR (NM_010813, exon 1 of 6) 5' UTR (NM_010813, exon 1 of 6) 347 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak2_96_1272_-0.828678340537948_9.89967753363238_34.3799479399993 chr10 98773979 98777661 + 34.3799479399993 NA Intergenic Intergenic -139332 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak2_570_4976_0.341257835423434_12.4516895893887_34.3783719029123 chr5 105514281 105521188 + 34.3783719029123 NA Intergenic Intergenic -1737 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak2_306_2061_0.514362654532027_11.2670099446341_34.3769638314493 chr8 122313651 122320059 + 34.3769638314493 NA intron (NM_009569, intron 3 of 9) intron (NM_009569, intron 3 of 9) 34714 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_208_1156_0.667572467417253_10.5099593828161_34.3332579283281 chr15 101976359 101978506 + 34.3332579283281 NA Intergenic CpG -23145 NM_212487 332131 Mm.325105 NM_212487 ENSMUSG00000050463 Krt78 2310030B04Rik|Kb40 keratin 78 protein-coding common_peak2_310_2101_0.509552437171887_11.2923231725481_34.3240761156822 chr5 114172867 114173248 + 34.3240761156822 NA intron (NM_133904, intron 1 of 51) intron (NM_133904, intron 1 of 51) 7539 NM_133904 100705 Mm.81793 NM_133904 ENSMUSG00000042010 Acacb AI597064|AW743042|Acc2|Accb acetyl-Coenzyme A carboxylase beta protein-coding common_peak2_86_260_1.26489183409597_8.66035191361787_34.286203932146 chr18 35118175 35119512 + 34.286203932146 NA promoter-TSS (NM_009818) promoter-TSS (NM_009818) -69 NM_009818 12385 Mm.18962 NM_009818 ENSMUSG00000037815 Ctnna1 2010010M04Rik|AA517462|AI988031|Catna1 catenin (cadherin associated protein), alpha 1 protein-coding common_peak1_176_2263_-0.594997321636773_10.8471595820135_34.2281743742583 chr5 129786258 129788003 + 34.2281743742583 NA promoter-TSS (NM_009838) promoter-TSS (NM_009838) 123 NM_133900 100678 Mm.271784 NM_133900 ENSMUSG00000029446 Psph AI480570|PSP|PSPase phosphoserine phosphatase protein-coding common_peak1_568_4955_0.341148809296673_12.4455348767889_34.2156339496705 chr8 46739670 46742622 + 34.2156339496705 NA intron (NM_008391, intron 1 of 8) CpG 1401 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak2_200_1089_0.684565796638717_10.4323953179836_34.2105801339857 chr8 123101590 123103885 + 34.2105801339857 NA promoter-TSS (NR_028128) promoter-TSS (NR_028128) -321 NR_028128 100302565 NR_028128 Snord68 MBII-202 small nucleolar RNA, C/D box 68 snoRNA common_peak1_447_3550_0.399004349742379_11.9935118198922_34.2103283114678 chr11 75530519 75533768 + 34.2103283114678 NA promoter-TSS (NM_001199283) promoter-TSS (NM_001199283) 31 NM_001199283 215113 Mm.11186 NM_173388 ENSMUSG00000038178 Slc43a2 7630402D21Rik|BC042513|Lat4 solute carrier family 43, member 2 protein-coding common_peak2_167_820_0.776073165579762_10.0692749945677_34.1975140226803 chr14 25532934 25535816 + 34.1975140226803 NA promoter-TSS (NR_037236) promoter-TSS (NR_037236) -64 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_165_804_0.783273207352725_10.0444815766783_34.1915177853182 chr8 22705738 22707347 + 34.1915177853182 NA promoter-TSS (NM_010546) promoter-TSS (NM_010546) 41 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak2_139_1796_-0.676704356613696_10.4730225152031_34.1861977980359 chrX 48145653 48149799 + 34.1861977980359 NA intron (NM_028773, intron 1 of 7) intron (NM_028773, intron 1 of 7) 1290 NM_028773 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding common_peak1_146_1883_-0.658572496548816_10.5502970013384_34.0883394829441 chr10 128524542 128526143 + 34.0883394829441 NA intron (NM_011843, intron 1 of 30) CpG 517 NM_011843 23943 Mm.66056 NM_011843 ENSMUSG00000025366 Esyt1 Fam62a|Mbc2|vp115 extended synaptotagmin-like protein 1 protein-coding common_peak2_511_4283_0.364572054306691_12.2470287919036_34.0803211510575 chr9 25251063 25254390 + 34.0803211510575 NA intron (NM_001205367, intron 1 of 12) CpG 287 NM_001205367 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding common_peak1_64_889_-1.02074700552086_9.28728802309333_34.0774104837487 chr8 34107370 34108492 + 34.0774104837487 NA promoter-TSS (NM_001293758) promoter-TSS (NM_001293758) -117 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak2_395_2983_0.431647265931639_11.7588554532211_34.0691754555755 chr2 57114039 57118255 + 34.0691754555755 NA intron (NM_001139509, intron 1 of 7) intron (NM_001139509, intron 1 of 7) -1109 NM_013613 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak1_36_563_-1.35976770118738_8.4596675018051_34.0612729913852 chr5 77165283 77166125 + 34.0612729913852 NA Intergenic Intergenic 45501 NM_001289767 69982 Mm.46106 NM_183284 ENSMUSG00000053030 Spink2 1700007F22Rik|AV038945|HUSI-II serine peptidase inhibitor, Kazal type 2 protein-coding common_peak2_476_3880_0.381798079964231_12.1131117577676_34.059122407498 chr7 127132020 127140291 + 34.059122407498 NA non-coding (NR_110337, exon 2 of 4) non-coding (NR_110337, exon 2 of 4) 1668 NR_110337 20737 Mm.283714 NM_009259 ENSMUSG00000051457 Spn A630014B01Rik|Cd43|Galgp|Ly-48|Ly48 sialophorin protein-coding common_peak1_226_2908_-0.516362834112575_11.248126164044_34.0422732037866 chr7 25268286 25270508 + 34.0422732037866 NA intron (NM_001302811, intron 1 of 20) intron (NM_001302811, intron 1 of 20) 1698 NM_001302811 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding unique_peak2_12_283_-2.2209381860501_7.03927802647963_34.0399254484981 chr1 125437194 125438613 + 34.0399254484981 NA Intergenic Intergenic -2176 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak1_65_900_-1.0114510369663_9.30965777733039_34.0360040515534 chr5 33273920 33274718 + 34.0360040515534 NA intron (NM_001198861, intron 1 of 9) CpG 685 NM_001198861 13016 Mm.7286 NM_013502 ENSMUSG00000037373 Ctbp1 BARS|CtBP3/BARS|D4S115h|D5H4S115|D5H4S115E C-terminal binding protein 1 protein-coding common_peak2_78_1053_-0.919560060523898_9.58187912137527_34.0280811734805 chr6 125235397 125237834 + 34.0280811734805 NA intron (NM_001286753, intron 1 of 4) intron (NM_001286753, intron 1 of 4) 412 NM_001033126 21940 Mm.367714 NM_001033126 ENSMUSG00000030336 Cd27 S152|Tnfrsf7|Tp55 CD27 antigen protein-coding common_peak1_77_1042_-0.926967681725548_9.56303960165699_34.0258775424204 chr7 106528286 106529209 + 34.0258775424204 NA Intergenic Intergenic -87674 NR_003967 209380 Mm.461779 NM_001001318 Gm4759 EG209380 GTPase, very large interferon inducible 1 pseudogene pseudo common_peak2_74_1006_-0.945698259717117_9.50299883814823_34.0068000522666 chr10 117062638 117064438 + 34.0068000522666 NA intron (NM_007636, intron 1 of 15) CpG 276 NM_007636 12461 Mm.247788 NM_007636 ENSMUSG00000034024 Cct2 Cctb chaperonin containing Tcp1, subunit 2 (beta) protein-coding common_peak1_75_1017_-0.937933020306092_9.52255533592265_34.0006226752367 chr11 95858806 95859910 + 34.0006226752367 NA intron (NR_045187, intron 1 of 1) CpG 541 NR_045187 73906 Mm.399894 NR_045187 ENSMUSG00000086015 4833417C18Rik - RIKEN cDNA 4833417C18 gene ncRNA common_peak2_651_5979_0.311139297208614_12.7014994176898_33.973776499213 chr13 58126372 58130515 + 33.973776499213 NA 5' UTR (NM_029872, exon 1 of 1) 5' UTR (NM_029872, exon 1 of 1) 113 NM_029872 77134 Mm.490274 NM_029872 ENSMUSG00000007836 Hnrnpa0 1110055B05Rik|3010025E17Rik|Hnrpa0|hnRNP A0 heterogeneous nuclear ribonucleoprotein A0 protein-coding common_peak1_17_342_-1.91737940430015_7.46337506402274_33.9574539695784 chr19 17295508 17295915 + 33.9574539695784 NA Intergenic Intergenic 43794 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak2_180_926_0.732781786850831_10.2228164220509_33.9463774400825 chr13 93303055 93304838 + 33.9463774400825 NA promoter-TSS (NM_147176) promoter-TSS (NM_147176) -549 NM_147176 26556 Mm.37533 NM_011982 ENSMUSG00000007617 Homer1 PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1 homer scaffolding protein 1 protein-coding common_peak1_33_527_-1.41424554719793_8.33727134575949_33.9366239768751 chr6 115852723 115853456 + 33.9366239768751 NA promoter-TSS (NM_031177) promoter-TSS (NM_031177) 252 NM_010774 17193 Mm.259308 NM_010774 ENSMUSG00000030322 Mbd4 Med1 methyl-CpG binding domain protein 4 protein-coding unique_peak1_36_33_2.69232080996107_6.43362324623087_33.9160768380249 chr18 23812419 23813056 + 33.9160768380249 NA intron (NM_153058, intron 1 of 6) intron (NM_153058, intron 1 of 6) 8767 NM_153058 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak2_161_2069_-0.622460658207453_10.704184723283_33.8957165325522 chr10 53595685 53598283 + 33.8957165325522 NA promoter-TSS (NM_025541) promoter-TSS (NM_025541) 23 NM_025541 66403 Mm.272989 NM_025541 ENSMUSG00000019857 Asf1a 2310079C17Rik|C79052 anti-silencing function 1A histone chaperone protein-coding common_peak2_189_2425_-0.569281733658942_10.959722968291_33.8946253823135 chr10 128546578 128550046 + 33.8946253823135 NA promoter-TSS (NM_134003) promoter-TSS (NM_134003) -568 NM_134003 103284 Mm.68289 NM_134003 ENSMUSG00000039810 Zc3h10 AI790326 zinc finger CCCH type containing 10 protein-coding common_peak2_220_1264_0.637619506467333_10.6237314228153_33.8682526340172 chr2 181482214 181485249 + 33.8682526340172 NA Intergenic Intergenic -9475 NM_183181 241850 Mm.87455 NM_183181 ENSMUSG00000055882 Abhd16b 1700095H12 abhydrolase domain containing 16B protein-coding common_peak1_22_400_-1.70899762236141_7.79295961527422_33.8456596885724 chr19 8919398 8920021 + 33.8456596885724 NA promoter-TSS (NM_024256) promoter-TSS (NM_024256) -684 NM_024256 72727 Mm.259 NM_024256 ENSMUSG00000071649 B3gat3 2810405M13Rik beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) protein-coding common_peak1_177_902_0.741048502469686_10.1891064287157_33.845235005679 chr5 88720193 88722249 + 33.845235005679 NA intron (NM_026735, intron 1 of 5) CpG 350 NM_026735 68473 Mm.35764 NM_026735 ENSMUSG00000006262 Mob1b 1110003E08Rik|AU015450|B230364F10|Mobkl1a MOB kinase activator 1B protein-coding common_peak1_62_863_-1.03327834221169_9.23824833105763_33.8432263794339 chr8 18846246 18847160 + 33.8432263794339 NA exon (NM_026792, exon 1 of 8) exon (NM_026792, exon 1 of 8) 424 NM_026792 52123 Mm.24117 NM_026792 ENSMUSG00000031467 Agpat5 1110013A05Rik|D8Ertd319e 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) protein-coding common_peak2_281_1825_0.539406864781435_11.1041744823749_33.8121752055967 chr13 35740461 35743733 + 33.8121752055967 NA intron (NM_001123386, intron 1 of 6) CpG 695 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding common_peak1_79_223_1.33700392794588_8.47585688603055_33.7860255546143 chr14 77036100 77037266 + 33.7860255546143 NA promoter-TSS (NM_175369) promoter-TSS (NM_175369) -66 NM_172488 210808 Mm.89278 NM_172488 ENSMUSG00000044350 Lacc1 9030625A04Rik laccase (multicopper oxidoreductase) domain containing 1 protein-coding common_peak1_36_561_-1.35464266900952_8.45710498571617_33.7461540966538 chr15 80083615 80084184 + 33.7461540966538 NA promoter-TSS (NM_013762) promoter-TSS (NM_013762) -493 NM_013762 27367 Mm.290771 NM_013762 ENSMUSG00000060036 Rpl3 F2|J1 ribosomal protein L3 protein-coding common_peak1_105_378_1.07630003845838_9.10420405740028_33.7362151357978 chr9 14350813 14352822 + 33.7362151357978 NA Intergenic Intergenic 29425 NM_028013 71946 Mm.41423 NM_028013 ENSMUSG00000037419 Endod1 2210414F18Rik|2310067E08Rik|C85344 endonuclease domain containing 1 protein-coding common_peak2_282_1835_0.537791746028956_11.1112462164283_33.7349579650152 chr13 47104603 47106996 + 33.7349579650152 NA intron (NM_025900, intron 1 of 10) CpG 422 NM_025900 110052 Mm.131150 NM_025900 ENSMUSG00000021377 Dek 1810019E15Rik|D13H6S231E DEK oncogene (DNA binding) protein-coding common_peak1_92_298_1.18681504668949_8.81740919754285_33.7227703827603 chr17 21566464 21567607 + 33.7227703827603 NA promoter-TSS (NM_001002008) promoter-TSS (NM_001002008) -11 NM_001002008 381066 Mm.441097 NM_001002008 ENSMUSG00000067931 Zfp948 - zinc finger protein 948 protein-coding common_peak1_55_780_-1.0960016769377_9.06117789967313_33.7187784121969 chr1 58712975 58713823 + 33.7187784121969 NA 5' UTR (NM_009805, exon 1 of 5) 5' UTR (NM_009805, exon 1 of 5) 113 NM_207653 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak1_72_980_-0.955790299833611_9.46021417630243_33.7133684470317 chr3 36861624 36863036 + 33.7133684470317 NA promoter-TSS (NM_172679) promoter-TSS (NM_172679) -776 NM_172679 229227 Mm.207907 NM_172679 ENSMUSG00000037270 4932438A13Rik 4732443H21|B830039D19Rik|D630029K19Rik|FSA|Kiaa1109|Tweek RIKEN cDNA 4932438A13 gene protein-coding common_peak2_616_5550_0.320896939208742_12.598980447366_33.6871404188576 chr1 138286406 138294337 + 33.6871404188576 NA TTS (NM_177397) TTS (NM_177397) 16633 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_110_411_1.03741764018148_9.20520934727396_33.6756064161179 chr9 54699007 54700480 + 33.6756064161179 NA exon (NM_021422, exon 1 of 7) exon (NM_021422, exon 1 of 7) 184 NM_021422 58233 Mm.489676 NM_021422 ENSMUSG00000032285 Dnaja4 1110021L12Rik|AV358213|Dj4|Hsj4|mmDjA4 DnaJ heat shock protein family (Hsp40) member A4 protein-coding common_peak2_144_649_0.852472993475073_9.77053240465335_33.6017691307328 chr11 30771031 30772776 + 33.6017691307328 NA 5' UTR (NM_134013, exon 1 of 47) 5' UTR (NM_134013, exon 1 of 47) 128 NM_134013 103554 Mm.240066 NM_134013 ENSMUSG00000040850 Psme4 AA409398|AU041366|TEMO|mKIAA0077 proteasome (prosome, macropain) activator subunit 4 protein-coding common_peak1_36_560_-1.35207330939738_8.4558203059101_33.5889214193522 chr11 97883345 97884055 + 33.5889214193522 NA intron (NM_001081435, intron 1 of 10) CpG 454 NM_001081435 72973 Mm.245939 NM_001081435 ENSMUSG00000070336 Fbxo47 2900052P03Rik|Gm1562 F-box protein 47 protein-coding unique_peak2_36_560_-1.35207330939738_8.4558203059101_33.5889214193522 chr6 136448967 136451062 + 33.5889214193522 NA Intergenic MTD|LTR|ERVL-MaLR -34445 NM_001201390 100502936 Mm.21182 NM_001201390 ENSMUSG00000045291 E330021D16Rik C85549 RIKEN cDNA E330021D16 gene protein-coding common_peak1_54_767_-1.10367148233524_9.03312675955354_33.5380085969606 chr11 49093872 49095010 + 33.5380085969606 NA intron (NM_001271676, intron 2 of 2) intron (NM_001271676, intron 2 of 2) 7424 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_890_9134_0.252534482605881_13.2834562548178_33.5278586085621 chr11 118142394 118150012 + 33.5278586085621 NA Intergenic Intergenic -16984 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak2_153_1964_-0.636979745186546_10.6218237245527_33.5266088753249 chr3 79236688 79240290 + 33.5266088753249 NA intron (NR_045502, intron 1 of 2) intron (NR_045502, intron 1 of 2) 25570 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA unique_peak2_28_467_-1.52170140507084_8.10951401704799_33.5229438504354 chr10 130335751 130338303 + 33.5229438504354 NA intron (NM_183264, intron 1 of 8) B4A|SINE|B4 14175 NM_183264 67596 Mm.131264 NM_183264 ENSMUSG00000034833 Tespa1 5830405N20Rik|A430001F24Rik|AI450549 thymocyte expressed, positive selection associated 1 protein-coding unique_peak2_110_1433_-0.761911141337208_10.1048737380333_33.5051909982099 chr5 112239355 112244543 + 33.5051909982099 NA Intergenic MT2B1|LTR|ERVL 10569 NM_001312884 12959 Mm.40324 NM_021351 ENSMUSG00000066975 Cryba4 - crystallin, beta A4 protein-coding unique_peak2_25_433_-1.60612998780355_7.95848623854271_33.5032695248579 chr11 118498759 118500824 + 33.5032695248579 NA intron (NM_001285437, intron 8 of 13) intron (NM_001285437, intron 8 of 13) 22831 NM_172573 217364 Mm.473963 NM_172573 ENSMUSG00000033857 Engase C130099A03|D230014K01Rik endo-beta-N-acetylglucosaminidase protein-coding common_peak1_19_362_-1.81269151036497_7.59747998281326_33.4890915632255 chr8 34149155 34149601 + 33.4890915632255 NA Intergenic Intergenic -2639 NM_026609 68192 Mm.34212 NM_026609 ENSMUSG00000031513 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 protein-coding common_peak1_255_3283_-0.478535903907213_11.4419704598242_33.4649030847252 chr2 147011952 147014109 + 33.4649030847252 NA promoter-TSS (NM_011917) promoter-TSS (NM_011917) -30 NM_011917 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding common_peak1_73_989_-0.944888752569206_9.47884033868237_33.4639412096874 chrX 101267300 101268345 + 33.4639412096874 NA exon (NM_013563, exon 2 of 8) exon (NM_013563, exon 2 of 8) 433 NM_001308535 16186 Mm.2923 NM_013563 ENSMUSG00000031304 Il2rg CD132|[g]c|gamma(c)|gc|p64 interleukin 2 receptor, gamma chain protein-coding common_peak1_52_743_-1.12341704566492_8.97745028827557_33.4597352486013 chr1 184066226 184067323 + 33.4597352486013 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 32313 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_26_443_-1.57220829951051_8.00831171659485_33.4579417590211 chr2 32164705 32165224 + 33.4579417590211 NA intron (NM_001159634, intron 1 of 31) L1M5|LINE|L1 13816 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak2_458_3686_0.387708108340204_12.0420857552639_33.4454974244638 chr3 93553914 93563257 + 33.4454974244638 NA intron (NM_009112, intron 1 of 2) intron (NM_009112, intron 1 of 2) 3468 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding unique_peak2_36_559_-1.34949936573356_8.45453333407819_33.4319074803736 chrX 139812268 139814423 + 33.4319074803736 NA Intergenic L1_Mus3|LINE|L1 12537 NM_016675 12738 Mm.117068 NM_016675 ENSMUSG00000047230 Cldn2 AL022813 claudin 2 protein-coding common_peak1_312_2132_0.499774945653641_11.3085557231674_33.4274769979446 chr8 107292713 107295048 + 33.4274769979446 NA exon (NM_001286260, exon 1 of 13) exon (NM_001286260, exon 1 of 13) 410 NM_133957 54446 Mm.390057 NM_018823 ENSMUSG00000003847 Nfat5 AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz nuclear factor of activated T cells 5 protein-coding common_peak1_130_1676_-0.694579711717473_10.3643771177056_33.4087065485924 chr7 25237173 25239360 + 33.4087065485924 NA promoter-TSS (NM_001031667) promoter-TSS (NM_001031667) -415 NM_001031667 606496 Mm.491101 NM_001031667 ENSMUSG00000057177 Gsk3a 2700086H06Rik glycogen synthase kinase 3 alpha protein-coding common_peak2_54_766_-1.10179174911702_9.03218689294442_33.4030395353253 chr9 61701699 61703438 + 33.4030395353253 NA Intergenic Intergenic 211942 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding unique_peak1_29_15_3.4086564325977_5.70432821629885_33.3824949590848 chr10 18545633 18546185 + 33.3824949590848 NA 5' UTR (NM_019487, exon 1 of 4) 5' UTR (NM_019487, exon 1 of 4) 167 NM_019487 56016 Mm.35551 NM_019487 ENSMUSG00000019853 Hebp2 SOUL heme binding protein 2 protein-coding common_peak2_284_1859_0.531517400433101_11.1268456062119_33.378069080476 chr1 161033541 161036693 + 33.378069080476 NA promoter-TSS (NR_002840) promoter-TSS (NR_002840) -49 NR_002840 14455 Mm.270065 NR_002840 ENSMUSG00000053332 Gas5 Gas-5|Mir5117|Snhg2 growth arrest specific 5 ncRNA common_peak1_158_756_0.795726791610665_9.96201288579107_33.3712932272198 chr13 75707529 75708693 + 33.3712932272198 NA intron (NM_138953, intron 1 of 11) CpG 627 NM_138953 192657 Mm.21288 NM_138953 ENSMUSG00000001542 Ell2 - elongation factor RNA polymerase II 2 protein-coding common_peak2_487_4017_0.372094535872748_12.1583091166697_33.3633171032215 chr4 43557311 43563825 + 33.3633171032215 NA intron (NM_011602, intron 1 of 56) intron (NM_011602, intron 1 of 56) 2015 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding common_peak2_179_2290_-0.582358483367331_10.870582501621_33.3547108186148 chr5 124481967 124484249 + 33.3547108186148 NA promoter-TSS (NM_029532) promoter-TSS (NM_029532) -47 NM_029532 76167 Mm.156035 NM_029532 ENSMUSG00000029402 Snrnp35 6330548G22Rik small nuclear ribonucleoprotein 35 (U11/U12) protein-coding common_peak2_393_2972_0.42801517990401_11.7517113378596_33.3355313304992 chr9 20642299 20645992 + 33.3355313304992 NA promoter-TSS (NM_001310746) promoter-TSS (NM_001310746) 622 NM_001286529 30843 Mm.24608 NM_013911 ENSMUSG00000066892 Fbxl12 3110048D16Rik|Fbl12 F-box and leucine-rich repeat protein 12 protein-coding common_peak2_115_446_0.997756915701963_9.3030094790343_33.3347013437418 chr7 75571250 75573157 + 33.3347013437418 NA intron (NM_029332, intron 3 of 36) intron (NM_029332, intron 3 of 36) 116669 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_52_742_-1.12147663509548_8.97648008299085_33.3228377280137 chr4 134494312 134495159 + 33.3228377280137 NA Intergenic Intergenic -2026 NM_001285845 71904 Mm.142343 NM_027995 ENSMUSG00000037348 Paqr7 2310021M12Rik|AV001994|BB007237|Mpra|PGLP|mPR progestin and adipoQ receptor family member VII protein-coding common_peak1_551_4769_0.342658702912987_12.3911029023494_33.265428127481 chr7 132798474 132804833 + 33.265428127481 NA intron (NM_212473, intron 1 of 4) intron (NM_212473, intron 1 of 4) 11543 NM_212473 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_131_1687_-0.690554618673595_10.3758218793704_33.2531810768296 chr1 52799725 52801226 + 33.2531810768296 NA intron (NM_008384, intron 1 of 5) intron (NM_008384, intron 1 of 5) 17213 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding common_peak1_443_3521_0.394963595906198_11.9796609917843_33.2230177245644 chr15 73730834 73734341 + 33.2230177245644 NA intron (NM_001166388, intron 1 of 5) intron (NM_001166388, intron 1 of 5) 7657 NM_001166388 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak1_538_4616_0.34751763298917_12.346498833544_33.1889279625679 chr6 136937665 136942136 + 33.1889279625679 NA promoter-TSS (NM_001301303) promoter-TSS (NM_001301303) -373 NM_001301303 11857 Mm.2241 NM_007486 ENSMUSG00000030220 Arhgdib D4|Gdid4|Ly-GDI Rho, GDP dissociation inhibitor (GDI) beta protein-coding common_peak1_232_1377_0.607751388169557_10.7322358667891_33.1861700886516 chr4 154926841 154929071 + 33.1861700886516 NA intron (NM_178931, intron 1 of 7) intron (NM_178931, intron 1 of 7) 121 NM_178931 230979 Mm.215147 NM_178931 ENSMUSG00000042333 Tnfrsf14 Atar|HveA|Hvem|Tnfrs14 tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator) protein-coding common_peak1_293_1948_0.519104688992433_11.1880707197541_33.1801842373092 chr1 127204530 127207387 + 33.1801842373092 NA intron (NM_145128, intron 1 of 17) intron (NM_145128, intron 1 of 17) 972 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_319_2205_0.490366396784816_11.3524002739838_33.1786954362812 chr2 60208878 60211459 + 33.1786954362812 NA intron (NM_020575, intron 1 of 9) CpG 232 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding common_peak1_381_2846_0.435757039430884_11.6931052974577_33.1746824974508 chr19 46732516 46736464 + 33.1746824974508 NA intron (NM_020577, intron 10 of 10) intron (NM_020577, intron 10 of 10) 27047 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak2_301_2027_0.509290759168566_11.2404873165876_33.152504716916 chr8 72358488 72366218 + 33.152504716916 NA intron (NM_007944, intron 21 of 23) B4A|SINE|B4 43291 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_40_47_2.37648076434427_6.77320288289329_33.1457989885736 chr14 25635959 25636647 + 33.1457989885736 NA intron (NM_001310666, intron 7 of 23) intron (NM_001310666, intron 7 of 23) 32790 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak2_462_3736_0.383629742840828_12.0594797198012_33.1121956548599 chr1 43533914 43543893 + 33.1121956548599 NA intron (NM_010879, intron 3 of 4) intron (NM_010879, intron 3 of 4) 93152 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_231_1369_0.608540070223746_10.7242302129598_33.0936648687365 chr16 94369868 94371767 + 33.0936648687365 NA promoter-TSS (NM_001159616) promoter-TSS (NM_001159616) 78 NM_009441 22129 Mm.213408 NM_009441 ENSMUSG00000040785 Ttc3 2610202A04Rik|AA409221|D16Ium21|D16Ium21e|TPRD|mKIAA4119 tetratricopeptide repeat domain 3 protein-coding common_peak2_161_782_0.780085896888194_10.0029114457351_33.0495330778329 chr13 75707384 75708733 + 33.0495330778329 NA intron (NM_138953, intron 1 of 11) CpG 574 NM_138953 192657 Mm.21288 NM_138953 ENSMUSG00000001542 Ell2 - elongation factor RNA polymerase II 2 protein-coding common_peak2_179_925_0.724534876677108_10.2171358215988_33.0122374784557 chr2 101761518 101764377 + 33.0122374784557 NA intron (NM_175181, intron 3 of 8) intron (NM_175181, intron 3 of 8) 34760 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak2_472_3852_0.37734211272225_12.1004375270207_32.9868637650677 chr17 45554279 45559031 + 32.9868637650677 NA intron (NM_008690, intron 1 of 5) intron (NM_008690, intron 1 of 5) 955 NM_001304956 18037 Mm.57043 NM_008690 ENSMUSG00000023947 Nfkbie I-kappa-B-epsilon|IKBE|IkB-E|NF-kappa-BIE|ikB-epsilon nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon protein-coding common_peak2_113_1464_-0.745573918573079_10.1438979900231_32.983831343305 chr8 70790804 70793456 + 32.983831343305 NA intron (NM_199308, intron 1 of 25) intron (NM_199308, intron 1 of 25) 303 NM_199308 546071 Mm.250731 NM_199308 ENSMUSG00000031833 Mast3 BC024265|mKIAA0561 microtubule associated serine/threonine kinase 3 protein-coding common_peak1_115_448_0.991316302144135_9.30622978581321_32.9831661407085 chr17 25918996 25919727 + 32.9831661407085 NA intron (NM_139154, intron 2 of 6) CpG 353 NM_139154 224624 Mm.328872 NM_139154 ENSMUSG00000025730 Rab40c RAR3 Rab40C, member RAS oncogene family protein-coding common_peak2_115_448_0.991316302144135_9.30622978581321_32.9831661407085 chr7 75854383 75856447 + 32.9831661407085 NA intron (NM_182782, intron 1 of 1) intron (NM_182782, intron 1 of 1) 7077 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_33_521_-1.39775742440936_8.32902728436521_32.965686203609 chr10 79897076 79897824 + 32.965686203609 NA intron (NM_198107, intron 11 of 14) intron (NM_198107, intron 11 of 14) 6597 NM_001291915 11537 Mm.4407 NM_013459 ENSMUSG00000061780 Cfd Adn|DF complement factor D (adipsin) protein-coding common_peak2_79_1056_-0.901400811379194_9.59505925569309_32.9524021346009 chr11 115197880 115200761 + 32.9524021346009 NA intron (NM_001033393, intron 3 of 9) intron (NM_001033393, intron 3 of 9) 11833 NM_001033393 320534 Mm.260587 NM_001033393 ENSMUSG00000045980 Tmem104 C630005D06Rik|mFLJ00021 transmembrane protein 104 protein-coding common_peak2_109_408_1.03194629663052_9.19193018125701_32.939585919974 chr10 82990888 82993006 + 32.939585919974 NA intron (NM_021439, intron 1 of 2) intron (NM_021439, intron 1 of 2) 6450 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_34_532_-1.37654600823564_8.36971871864136_32.9311281452926 chr19 5488608 5489428 + 32.9311281452926 NA promoter-TSS (NM_027877) promoter-TSS (NM_027877) -682 NM_027877 71711 Mm.27697 NM_027877 ENSMUSG00000024906 Mus81 1200008A18Rik|AI182501|AW045863 MUS81 structure-specific endonuclease subunit protein-coding common_peak1_137_1758_-0.67133213603881_10.4448736994526_32.9288801661227 chr14 54517665 54518832 + 32.9288801661227 NA promoter-TSS (NM_013768) promoter-TSS (NM_013768) -778 NM_001313907 27374 Mm.196585 NM_013768 ENSMUSG00000023110 Prmt5 Jbp1|Skb1 protein arginine N-methyltransferase 5 protein-coding common_peak1_80_1068_-0.895704054727611_9.61419411035669_32.9239047199467 chr11 51688788 51689424 + 32.9239047199467 NA promoter-TSS (NM_025319) promoter-TSS (NM_025319) -472 NM_025319 66050 Mm.35693 NM_025319 ENSMUSG00000007777 0610009B22Rik - RIKEN cDNA 0610009B22 gene protein-coding common_peak1_58_810_-1.05803169917545_9.13454225462955_32.9075915673324 chr16 3894747 3895616 + 32.9075915673324 NA intron (NM_029090, intron 2 of 6) intron (NM_029090, intron 2 of 6) 10562 NM_001290689 74763 Mm.28403 NM_029090 ENSMUSG00000005982 Naa60 1200013P24Rik|AI315146|Nat15 N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding common_peak1_87_272_1.22026522414681_8.70288975299326_32.8957830511066 chr12 25212555 25214014 + 32.8957830511066 NA Intergenic Intergenic 84110 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_61_844_-1.02951301524888_9.2080510235451_32.8696842016206 chr9 72491734 72492538 + 32.8696842016206 NA promoter-TSS (NM_009359) promoter-TSS (NM_009359) -177 NM_009359 21778 Mm.14485 NM_009359 ENSMUSG00000090626 Tex9 Gm19407|tsec-1 testis expressed gene 9 protein-coding unique_peak2_32_509_-1.41703348919798_8.28583669225987_32.8501233041972 chr8 15017453 15020480 + 32.8501233041972 NA intron (NM_029116, intron 1 of 1) intron (NM_029116, intron 1 of 1) 7941 NM_029116 74901 Mm.46675 NM_029116 ENSMUSG00000055675 Kbtbd11 2900016B01Rik|4930465M17Rik|mKIAA0711 kelch repeat and BTB (POZ) domain containing 11 protein-coding common_peak1_75_1007_-0.923691097730313_9.51543437463476_32.8221869228163 chr4 101187488 101188722 + 32.8221869228163 NA intron (NM_146145, intron 4 of 24) intron (NM_146145, intron 4 of 24) 77177 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_271_3487_-0.458198819057332_11.5390849152483_32.8208005504234 chr13 23760552 23763355 + 32.8208005504234 NA promoter-TSS (NM_178192) promoter-TSS (NM_178192) 433 NM_013550 360198 Mm.221301 NM_013550 ENSMUSG00000069265 Hist1h3a - histone cluster 1, H3a protein-coding common_peak2_51_728_-1.12774144849965_8.94590428007711_32.8136126620973 chr4 132308414 132309644 + 32.8136126620973 NA promoter-TSS (NR_029412) promoter-TSS (NR_029412) 351 NR_029468 100039864 Mm.258912 NR_029468 ENSMUSG00000086290 Snhg12 2310005L22Rik small nucleolar RNA host gene 12 ncRNA common_peak1_134_581_0.885437810809632_9.6275942483131_32.7932242691807 chr2 75831699 75833178 + 32.7932242691807 NA exon (NM_172666, exon 1 of 20) exon (NM_172666, exon 1 of 20) 261 NM_172666 228061 Mm.31227 NM_172666 ENSMUSG00000042410 Agps 5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2 alkylglycerone phosphate synthase protein-coding common_peak2_134_581_0.885437810809632_9.6275942483131_32.7932242691807 chr2 75831718 75833169 + 32.7932242691807 NA exon (NM_172666, exon 1 of 20) exon (NM_172666, exon 1 of 20) 266 NM_172666 228061 Mm.31227 NM_172666 ENSMUSG00000042410 Agps 5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2 alkylglycerone phosphate synthase protein-coding unique_peak2_39_589_-1.28682460543207_8.56115884153317_32.7497328247036 chr6 52473045 52474852 + 32.7497328247036 NA Intergenic Intergenic -18503 NR_046049 74304 Mm.490579 NR_046049 ENSMUSG00000107895 1700094M24Rik - RIKEN cDNA 1700094M24 gene ncRNA unique_peak2_4_179_-3.25394349107161_5.86488135079387_32.7222724288537 chr15 62823513 62824550 + 32.7222724288537 NA Intergenic Intergenic -604580 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_211_2693_-0.526567747646478_11.1322502616391_32.7113151612103 chr12 8921207 8923155 + 32.7113151612103 NA exon (NM_008640, exon 1 of 7) exon (NM_008640, exon 1 of 7) 874 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding common_peak2_77_1030_-0.910272856573892_9.55469218908116_32.6295684154214 chr15 63656220 63659438 + 32.6295684154214 NA Intergenic Intergenic 150910 NM_031378 83492 Mm.335619 NM_031378 ENSMUSG00000079025 Gsdmc Gsdmc1|Mlze gasdermin C protein-coding common_peak1_24_416_-1.61788838130828_7.89495938279052_32.6233337747383 chr13 23562824 23563339 + 32.6233337747383 NA promoter-TSS (NM_178205) promoter-TSS (NM_178205) -716 NM_178205 319151 Mm.261658 NM_178205 ENSMUSG00000069273 Hist1h3e H3-f|H3.1 histone cluster 1, H3e protein-coding common_peak2_576_5082_0.329352008500244_12.4761405196986_32.6150351572007 chr12 16578754 16587770 + 32.6150351572007 NA intron (NM_172950, intron 1 of 19) RMER5|LTR|ERV1 6508 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak2_48_691_-1.15775199072604_8.85575223227371_32.5989999227071 chr18 67247891 67250050 + 32.5989999227071 NA Intergenic LTR73|LTR|ERV1 -3140 NM_172630 225651 Mm.235792 NM_172630 ENSMUSG00000062526 Mppe1 A530095G11 metallophosphoesterase 1 protein-coding common_peak1_75_1005_-0.920825764035923_9.51400170778756_32.5882787868115 chr6 72955985 72957052 + 32.5882787868115 NA TTS (NM_001190327) TTS (NM_001190327) 1714 NM_001039392 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding common_peak2_453_3643_0.385249814372035_12.0239321509881_32.5847996850402 chr10 6979155 6984456 + 32.5847996850402 NA intron (NM_001302795, intron 4 of 5) intron (NM_001302795, intron 4 of 5) -1340 NM_001170801 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding unique_peak2_15_312_-1.99376558380745_7.29313605502889_32.5514197041956 chr17 29769098 29770297 + 32.5514197041956 NA Intergenic RSINE1|SINE|B4 -52680 NM_001163741 68597 Mm.390979 NM_026782 ENSMUSG00000024018 Ccdc167 1110021J02Rik coiled-coil domain containing 167 protein-coding common_peak2_433_3420_0.396628236418232_11.938516506977_32.5474916211056 chr13 44729664 44735157 + 32.5474916211056 NA intron (NM_001205044, intron 2 of 18) intron (NM_001205044, intron 2 of 18) 1139 NM_001205043 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding common_peak1_88_1159_-0.846890721250746_9.75646372938956_32.5471544915572 chr17 25224875 25225601 + 32.5471544915572 NA intron (NM_028789, intron 1 of 4) intron (NM_028789, intron 1 of 4) 2656 NM_028789 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding common_peak1_155_1977_-0.623658638778537_10.6379973913698_32.5255666557719 chr9 44406482 44408181 + 32.5255666557719 NA promoter-TSS (NM_024266) promoter-TSS (NM_024266) 217 NM_021789 60409 Mm.29814 NM_021789 ENSMUSG00000032112 Trappc4 1500017G03Rik|AI303617|HSPC172|PTD009|Sbd|Sbdn|Sdcbp2|TRS23 trafficking protein particle complex 4 protein-coding common_peak1_139_1777_-0.661369271933523_10.465354972863_32.4939791963042 chr12 104065879 104068106 + 32.4939791963042 NA Intergenic Intergenic -10967 NR_002861 321018 Mm.297023 NR_002861 Serpina4-ps1 KALps|Klst serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1 pseudo common_peak1_33_518_-1.38944215619735_8.3248696502592_32.4833061384636 chr8 10480418 10481025 + 32.4833061384636 NA intron (NM_001081397, intron 23 of 35) intron (NM_001081397, intron 23 of 35) 326798 NM_001081397 244281 Mm.422761 NM_001081397 ENSMUSG00000039057 Myo16 BM140241|C230040D10Rik|Gm1105|NYAP3|mKIAA0865 myosin XVI protein-coding unique_peak2_33_518_-1.38944215619735_8.3248696502592_32.4833061384636 chr16 70326106 70327577 + 32.4833061384636 NA intron (NM_028803, intron 1 of 15) L1MD2|LINE|L1 12892 NM_028803 74185 Mm.396102 NM_028803 ENSMUSG00000022707 Gbe1 2310045H19Rik|2810426P10Rik|D16Ertd536e glucan (1,4-alpha-), branching enzyme 1 protein-coding common_peak2_75_1004_-0.919390960296688_9.51328430591795_32.4715486811013 chr4 129575517 129577447 + 32.4715486811013 NA TTS (NM_182783) TTS (NM_182783) 2098 NM_182783 230766 Mm.20377 NM_182783 ENSMUSG00000050493 Fam167b SEC family with sequence similarity 167, member B protein-coding common_peak2_71_957_-0.945971861490801_9.43089591499078_32.451846259529 chr15 42655922 42659337 + 32.451846259529 NA intron (NM_009640, intron 1 of 8) intron (NM_009640, intron 1 of 8) 19348 NM_001286062 11600 Mm.309336 NM_009640 ENSMUSG00000022309 Angpt1 1110046O21Rik|Ang-1|Ang1 angiopoietin 1 protein-coding common_peak2_90_1182_-0.835889315619742_9.79028970052992_32.4353950411215 chr15 79930993 79934520 + 32.4353950411215 NA promoter-TSS (NM_144811) promoter-TSS (NM_144811) -110 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak1_133_1702_-0.676706708342463_10.3955093655073_32.432180819067 chr1 131526161 131527505 + 32.432180819067 NA intron (NM_001081011, intron 1 of 22) CpG 528 NM_001081011 14270 Mm.276259 NM_019520 ENSMUSG00000026425 Srgap2 9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding common_peak2_110_418_1.01311173366534_9.21736230053202_32.4016559597076 chr4 63594518 63596369 + 32.4016559597076 NA Intergenic MTEb|LTR|ERVL-MaLR 5321 NR_028584 670833 Mm.32213 NR_028583 ENSMUSG00000084782 Gm11213 OTTMUSG00000000252 predicted gene 11213 ncRNA common_peak1_393_2986_0.421237405500863_11.7551002250612_32.3738289624886 chr2 25254508 25256556 + 32.3738289624886 NA promoter-TSS (NM_177344) promoter-TSS (NM_177344) 93 NM_177344 227615 Mm.213925 NM_177344 ENSMUSG00000078201 Tmem203 C730025P13Rik|Hbebp1 transmembrane protein 203 protein-coding common_peak1_288_1909_0.517911580645489_11.1583127132459_32.3737183506544 chr2 30123808 30125645 + 32.3737183506544 NA promoter-TSS (NM_001290503) promoter-TSS (NM_001290503) -115 NM_001290503 227693 Mm.44526 NM_178694 ENSMUSG00000039686 Zer1 C230075L19Rik|Zyg11bl zyg-11 related, cell cycle regulator protein-coding common_peak1_175_2226_-0.58125116653477_10.8302602595204_32.3577873034731 chr18 10609023 10610233 + 32.3577873034731 NA intron (NM_001081222, intron 1 of 10) CpG 724 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding unique_peak2_30_483_-1.45218103254029_8.19277272100445_32.3195619752783 chr6 128437681 128439178 + 32.3195619752783 NA promoter-TSS (NR_028593) promoter-TSS (NR_028593) 202 NM_010219 14228 Mm.12758 NM_010219 ENSMUSG00000030357 Fkbp4 59kDa|AL022792|AW208983|FKBP-4|FKBP-52|FKBP52|FKPB52|p59 FK506 binding protein 4 protein-coding common_peak1_386_2912_0.425706216420169_11.7211430943504_32.2964313044699 chr5 123973322 123976887 + 32.2964313044699 NA intron (NM_145070, intron 1 of 31) intron (NM_145070, intron 1 of 31) 1476 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding common_peak1_405_3117_0.412406522266609_11.8126084738311_32.2952734134894 chr12 73714407 73717550 + 32.2952734134894 NA intron (NM_001313977, intron 10 of 14) intron (NM_001313977, intron 10 of 14) 131182 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_250_3199_-0.476058708960727_11.4058268352944_32.2819075148267 chr12 104989955 104992460 + 32.2819075148267 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 7470 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak2_723_6934_0.282751770638107_12.90105605253_32.2652656955505 chr12 80110978 80117911 + 32.2652656955505 NA Intergenic CpG -1431 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak1_326_2287_0.476005414904533_11.3978740442307_32.2493196399225 chr4 132944793 132947817 + 32.2493196399225 NA Intergenic Intergenic -23754 NM_001163792 230789 Mm.11473 NM_145553 ENSMUSG00000028878 Fam76a - family with sequence similarity 76, member A protein-coding unique_peak2_16_322_-1.93185409371975_7.36946330783405_32.2455130480124 chr11 107123538 107125354 + 32.2455130480124 NA intron (NM_176850, intron 1 of 27) intron (NM_176850, intron 1 of 27) 7476 NM_176850 207165 Mm.343986 NM_176850 ENSMUSG00000040481 Bptf 9430093H17Rik|Falz bromodomain PHD finger transcription factor protein-coding common_peak1_110_1420_-0.748772671878084_10.0983045033037_32.2208304001591 chr9 46175566 46176756 + 32.2208304001591 NA intron (NM_027498, intron 4 of 24) intron (NM_027498, intron 4 of 24) -52469 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding common_peak1_71_955_-0.942956823735368_9.42938839611306_32.2134018020722 chrX 167087806 167089205 + 32.2134018020722 NA Intergenic Intergenic -18135 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak2_76_213_1.33525455437192_8.40909426358711_32.1874854883684 chr5 100820254 100821170 + 32.1874854883684 NA intron (NM_172405, intron 1 of 8) CpG 223 NM_172405 70681 Mm.486560 NM_172405 ENSMUSG00000035234 Fam175a 3830405G04Rik|5630400M01Rik|AI506069|AL024423|AV118690|Ccdc98 family with sequence similarity 175, member A protein-coding common_peak2_232_1387_0.597319708295588_10.7374517067261_32.1832548258128 chr7 81211943 81214484 + 32.1832548258128 NA promoter-TSS (NM_008803) promoter-TSS (NM_008803) -591 NM_008803 18584 Mm.371577 NM_008803 ENSMUSG00000025584 Pde8a AI551852|Pde8 phosphodiesterase 8A protein-coding common_peak1_521_4433_0.349151603138186_12.2889688564364_32.1767169857868 chr17 21533763 21538303 + 32.1767169857868 NA promoter-TSS (NR_131123) promoter-TSS (NR_131123) -155 NR_131123 319870 Mm.488274 NR_131123 ENSMUSG00000097781 9330136K24Rik - RIKEN cDNA 9330136K24 gene ncRNA common_peak1_43_631_-1.2173706942968_8.69509540102871_32.1663451274941 chr15 63657573 63658621 + 32.1663451274941 NA Intergenic Intergenic 150642 NM_031378 83492 Mm.335619 NM_031378 ENSMUSG00000079025 Gsdmc Gsdmc1|Mlze gasdermin C protein-coding common_peak1_129_1651_-0.686471139900194_10.3467624014693_32.1659082887812 chr2 152830562 152831693 + 32.1659082887812 NA promoter-TSS (NM_001289717) promoter-TSS (NM_001289717) -410 NM_001289739 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_94_1227_-0.813625055094967_9.8552823178227_32.1386253060757 chr2 75682430 75683794 + 32.1386253060757 NA intron (NM_010902, intron 1 of 4) intron (NM_010902, intron 1 of 4) 21551 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak1_378_2829_0.430445022168762_11.6818088488036_32.1331173179974 chr2 158717153 158719476 + 32.1331173179974 NA intron (NM_153089, intron 2 of 10) intron (NM_153089, intron 2 of 10) -49785 NM_027975 71878 Mm.85162 NM_027975 ENSMUSG00000027654 Fam83d 2310007D09Rik|BB104611 family with sequence similarity 83, member D protein-coding common_peak2_57_791_-1.05408099438069_9.10231612288927_32.1150382015353 chr11 97699558 97701382 + 32.1150382015353 NA promoter-TSS (NM_009545) promoter-TSS (NM_009545) 27 NM_009545 22658 Mm.2418 NM_009545 ENSMUSG00000018537 Pcgf2 Mel18|Rnf110|Zfp144|mel-18 polycomb group ring finger 2 protein-coding common_peak1_52_733_-1.1038944874001_8.96768900914316_32.0991038027296 chr5 144220679 144221522 + 32.0991038027296 NA intron (NM_027410, intron 1 of 24) RMER10A|LTR|ERVL 2478 NM_027410 70381 Mm.239412 NM_027410 ENSMUSG00000066621 Tecpr1 2210010N04Rik|mKIAA1358 tectonin beta-propeller repeat containing 1 protein-coding common_peak2_486_4027_0.364878410201397_12.1582871731075_32.0972230713306 chr18 6489329 6491760 + 32.0972230713306 NA TTS (NR_035446) TTS (NR_035446) 102 NR_035446 100316773 NR_035446 ENSMUSG00000084514 Mir1893 Mirn1893|mmu-mir-1893 microRNA 1893 ncRNA common_peak1_326_2289_0.474744868698615_11.3985043173336_32.0943169960113 chr13 114929234 114932626 + 32.0943169960113 NA intron (NM_008396, intron 1 of 29) intron (NM_008396, intron 1 of 29) 1111 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak2_106_393_1.0369185998994_9.14051111940607_32.0915547006232 chr5 36552708 36554796 + 32.0915547006232 NA intron (NM_001113362, intron 3 of 14) (GAAAA)n|Simple_repeat|Simple_repeat -23129 NM_001113364 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding common_peak1_13_286_-2.10495448784412_7.11242968275363_32.0678447190095 chr3 96501548 96501962 + 32.0678447190095 NA Intergenic Intergenic -23430 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding common_peak1_42_618_-1.22806842896031_8.65976138473411_32.0405083835541 chr13 51845533 51846358 + 32.0405083835541 NA promoter-TSS (NM_011817) promoter-TSS (NM_011817) -730 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_42_618_-1.22806842896031_8.65976138473411_32.0405083835541 chr5 34659142 34660264 + 32.0405083835541 NA promoter-TSS (NM_001080743) promoter-TSS (NM_001080743) 445 NM_029278 75416 Mm.40292 NM_029278 ENSMUSG00000036693 Nop14 2610033H07Rik|Nol14 NOP14 nucleolar protein protein-coding common_peak2_345_2485_0.456212261626423_11.5077167118657_32.0126443850006 chr15 78770507 78774050 + 32.0126443850006 NA intron (NM_008595, intron 1 of 7) intron (NM_008595, intron 1 of 7) 1167 NM_008595 17305 Mm.149235 NM_008595 ENSMUSG00000018169 Mfng AW546563 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_231_1380_0.597002643813585_10.7299989261648_31.9899091544797 chr11 46436653 46438110 + 31.9899091544797 NA intron (NM_001104556, intron 1 of 1) CpG 420 NM_025426 66213 Mm.24159 NM_025426 ENSMUSG00000020397 Med7 1110063B05Rik|Crsp33|Crsp9 mediator complex subunit 7 protein-coding common_peak1_170_861_0.73708917661436_10.1200886473963_31.9886932804641 chr13 93498239 93499849 + 31.9886932804641 NA exon (NM_021310, exon 1 of 11) exon (NM_021310, exon 1 of 11) 764 NM_021310 57748 Mm.100273 NM_021310 ENSMUSG00000021690 Jmy - junction-mediating and regulatory protein protein-coding common_peak1_115_454_0.972165201799223_9.31580533598567_31.9439927007823 chr15 78246898 78248682 + 31.9439927007823 NA intron (NM_008677, intron 1 of 9) intron (NM_008677, intron 1 of 9) 2979 NM_008677 17972 Mm.2068 NM_008677 ENSMUSG00000071715 Ncf4 AI451400|p40phox neutrophil cytosolic factor 4 protein-coding common_peak2_73_976_-0.925818789570618_9.46930535718307_31.9262488069704 chr9 22224840 22226620 + 31.9262488069704 NA promoter-TSS (NM_172763) promoter-TSS (NM_172763) 18 NM_001164624 235047 Mm.290849 NM_172763 ENSMUSG00000057982 Zfp809 BB114266|C330026E23 zinc finger protein 809 protein-coding common_peak1_26_434_-1.5426640238965_7.99353957878784_31.8920466451185 chr1 7397656 7398131 + 31.8920466451185 NA Intergenic CpG 308973 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding common_peak1_40_594_-1.25530259312988_8.58909456163037_31.8794566774097 chr7 29983700 29984407 + 31.8794566774097 NA promoter-TSS (NM_001033355) promoter-TSS (NM_001033355) 98 NM_001167872 243905 Mm.322432 NM_001033355 ENSMUSG00000074221 Zfp568 C80731|Gm1691|Znf568|chato zinc finger protein 568 protein-coding common_peak2_452_3644_0.380951801924533_12.0221790001766_31.8764569917104 chr10 19167038 19173651 + 31.8764569917104 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 3106 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_730_7034_0.279124704724483_12.9198970604861_31.8534134918289 chr11 49242863 49252296 + 31.8534134918289 NA intron (NM_001110149, intron 1 of 1) intron (NM_001110149, intron 1 of 1) 102 NM_001110149 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak2_242_1481_0.57714686684033_10.821903165726_31.8513573280232 chr5 105414489 105416685 + 31.8513573280232 NA promoter-TSS (NM_001033550) promoter-TSS (NM_001033550) -188 NM_001033550 433926 Mm.439781 NM_001033550 ENSMUSG00000070639 Lrrc8b R75581|Ta-lrrp|mKIAA0231 leucine rich repeat containing 8 family, member B protein-coding common_peak1_113_441_0.983208471345099_9.27950679506398_31.8465194056874 chr7 75854569 75856548 + 31.8465194056874 NA intron (NM_182782, intron 1 of 1) ID_B1|SINE|B4 7220 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_286_1896_0.51547541091942_11.1472416688712_31.8448919630452 chr17 87105834 87108930 + 31.8448919630452 NA promoter-TSS (NM_019654) promoter-TSS (NM_019654) -297 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding common_peak2_504_4240_0.354765012887341_12.2275712740401_31.8294266146026 chr13 43266783 43273713 + 31.8294266146026 NA intron (NM_001033399, intron 1 of 1) MER21B|LTR|ERVL 33924 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak2_119_482_0.946001676134642_9.38888021690309_31.8263646016111 chr16 13109085 13110729 + 31.8263646016111 NA 5' UTR (NM_015769, exon 1 of 11) 5' UTR (NM_015769, exon 1 of 11) 171 NM_015769 50505 Mm.287837 NM_015769 ENSMUSG00000022545 Ercc4 AI606920|Xpf excision repair cross-complementing rodent repair deficiency, complementation group 4 protein-coding common_peak2_306_2092_0.492834675644428_11.2777739340779_31.8202425708741 chr14 72708442 72711051 + 31.8202425708741 NA 5' UTR (NM_207636, exon 1 of 26) 5' UTR (NM_207636, exon 1 of 26) 257 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding common_peak1_62_847_-1.00631129461142_9.22476480725749_31.8143989110114 chr8 70791622 70792474 + 31.8143989110114 NA intron (NM_199308, intron 1 of 25) intron (NM_199308, intron 1 of 25) 385 NM_199308 546071 Mm.250731 NM_199308 ENSMUSG00000031833 Mast3 BC024265|mKIAA0561 microtubule associated serine/threonine kinase 3 protein-coding common_peak1_208_1179_0.639174472275538_10.524158380387_31.8116342811347 chr2 127322727 127324701 + 31.8116342811347 NA Intergenic Intergenic -12445 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak1_90_1176_-0.828553562318397_9.78662182387925_31.7918716516467 chr11 97994752 97996509 + 31.7918716516467 NA intron (NM_207231, intron 1 of 5) intron (NM_207231, intron 1 of 5) 543 NM_207231 217151 Mm.277896 NM_207231 ENSMUSG00000038352 Arl5c Arl12|BC065791 ADP-ribosylation factor-like 5C protein-coding common_peak1_17_331_-1.87035406947426_7.4398623966098_31.78966650102 chr8 69933137 69933585 + 31.78966650102 NA intron (NM_001286450, intron 3 of 12) L1_Mus1|LINE|L1 -30803 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak1_60_824_-1.02373085808621_9.17638488009008_31.7702296626663 chr3 88296448 88297621 + 31.7702296626663 NA promoter-TSS (NM_009836) promoter-TSS (NM_009836) -101 NM_009836 12462 Mm.256034 NM_009836 ENSMUSG00000001416 Cct3 AL024092|Cctg|Tcp1-rs3|TriC-P5 chaperonin containing Tcp1, subunit 3 (gamma) protein-coding common_peak1_19_353_-1.77647132245222_7.57936988885689_31.7694449099911 chr8 122349140 122349703 + 31.7694449099911 NA Intergenic Intergenic 11325 NM_133202 170732 Mm.154808 NM_133202 ENSMUSG00000039079 Trhr2 TRH-R2 thyrotropin releasing hormone receptor 2 protein-coding common_peak2_123_1573_-0.700312998400468_10.2700633263073_31.7650611359965 chr10 30802091 30804152 + 31.7650611359965 NA promoter-TSS (NM_172495) promoter-TSS (NM_172495) -14 NM_172495 211329 Mm.297903 NM_172495 ENSMUSG00000039697 Ncoa7 9030406N13Rik nuclear receptor coactivator 7 protein-coding common_peak2_274_1781_0.530114983742314_11.0643391133931_31.7594404340003 chr4 46583104 46588803 + 31.7594404340003 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) 15976 NM_001164804 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak2_36_548_-1.32087868779379_8.4402229951083_31.71938551172 chr7 44548008 44549786 + 31.71938551172 NA promoter-TSS (NM_011131) promoter-TSS (NM_011131) -82 NM_011131 18971 Mm.16549 NM_011131 ENSMUSG00000038644 Pold1 125kDa polymerase (DNA directed), delta 1, catalytic subunit protein-coding common_peak2_201_1120_0.652889941986386_10.4570155337986_31.7054154640254 chr2 132018512 132021962 + 31.7054154640254 NA intron (NM_175445, intron 1 of 10) B1_Mur4|SINE|Alu 9751 NM_175445 215653 Mm.204737 NM_175445 ENSMUSG00000027339 Rassf2 3830431H01Rik|9030412M04Rik|AI852669|AW495050 Ras association (RalGDS/AF-6) domain family member 2 protein-coding common_peak2_526_4501_0.344064105874578_12.3083823943914_31.7016008716235 chr10 98913082 98917027 + 31.7016008716235 NA promoter-TSS (NM_026482) promoter-TSS (NM_026482) -98 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_162_800_0.75818601151266_10.024751438165_31.6915287147267 chr8 22705822 22707302 + 31.6915287147267 NA promoter-TSS (NM_010546) promoter-TSS (NM_010546) 21 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak1_87_1139_-0.841795743985442_9.73392023705938_31.6814352084919 chr11 96441110 96442668 + 31.6814352084919 NA Intergenic Intergenic 22658 NR_033524 100038600 Mm.483549 NR_033524 Gm11529 OTTMUSG00000001775 predicted gene 11529 ncRNA common_peak2_554_4835_0.332425224993893_12.4058111417461_31.6285142098442 chr16 52058683 52065956 + 31.6285142098442 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 30770 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak2_100_1293_-0.78077370838705_9.94723504779898_31.6189931700613 chr7 27177798 27179754 + 31.6189931700613 NA TTS (NM_019394) TTS (NM_019394) 107 NM_029391 19342 Mm.482114 NM_029391 ENSMUSG00000053291 Rab4b 1500031G17Rik RAB4B, member RAS oncogene family protein-coding common_peak2_994_10637_0.228148059105893_13.4910133511728_31.6109438017126 chr6 41530489 41545833 + 31.6109438017126 NA Intergenic Intergenic 16385 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak1_200_2536_-0.534229587760933_11.0417930101835_31.6034113843248 chr14 14067319 14069344 + 31.6034113843248 NA intron (NM_139227, intron 4 of 11) intron (NM_139227, intron 4 of 11) 52573 NM_025550 66413 Mm.27591 NM_025550 ENSMUSG00000021737 Psmd6 2400006A19Rik proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 protein-coding common_peak1_229_1366_0.596381174552123_10.7149881148821_31.6032584440873 chr7 81212149 81214425 + 31.6032584440873 NA promoter-TSS (NM_008803) promoter-TSS (NM_008803) -517 NM_008803 18584 Mm.371577 NM_008803 ENSMUSG00000025584 Pde8a AI551852|Pde8 phosphodiesterase 8A protein-coding common_peak2_233_1402_0.589390983327602_10.7489947852837_31.5874401664628 chr11 46436485 46438233 + 31.5874401664628 NA intron (NM_001104556, intron 1 of 1) CpG 398 NM_025426 66213 Mm.24159 NM_025426 ENSMUSG00000020397 Med7 1110063B05Rik|Crsp33|Crsp9 mediator complex subunit 7 protein-coding unique_peak1_39_47_2.33278403809598_6.75135451976914_31.5711400761552 chr4 109663859 109664549 + 31.5711400761552 NA intron (NM_001301368, intron 2 of 2) intron (NM_001301368, intron 2 of 2) 1168 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) protein-coding common_peak1_282_1860_0.518279749383613_11.121002214751_31.5648197077781 chr7 122969832 122971082 + 31.5648197077781 NA promoter-TSS (NM_175023) promoter-TSS (NM_175023) 2 NR_045614 73951 Mm.389936 NR_045614 4930413G21Rik - RIKEN cDNA 4930413G21 gene ncRNA common_peak2_83_1091_-0.862057874748642_9.66172820354553_31.5607362991635 chr6 143867513 143869625 + 31.5607362991635 NA intron (NM_001113559, intron 9 of 13) intron (NM_001113559, intron 9 of 13) -217281 NR_045732 73425 Mm.417844 NR_045732 ENSMUSG00000086887 1700060C16Rik - RIKEN cDNA 1700060C16 gene ncRNA common_peak1_50_707_-1.11993477295554_8.90763816360523_31.5478465633444 chr11 98480309 98481284 + 31.5478465633444 NA intron (NM_011771, intron 6 of 7) intron (NM_011771, intron 6 of 7) 33962 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak1_102_1317_-0.772586771231312_9.9778412693924_31.536311302714 chr8 84066813 84067923 + 31.536311302714 NA intron (NM_009055, intron 1 of 20) CpG 532 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding common_peak2_54_752_-1.07521503628601_9.01889853652892_31.5325797845685 chrX 101331762 101333731 + 31.5325797845685 NA Intergenic Intergenic 33567 NM_172932 245537 Mm.121508 NM_172932 ENSMUSG00000031302 Nlgn3 A230085M13Rik|HNL3|NL3 neuroligin 3 protein-coding common_peak2_605_5457_0.313438341670956_12.5708758501096_31.5108777595028 chr5 20944445 20954050 + 31.5108777595028 NA intron (NM_001080977, intron 1 of 7) intron (NM_001080977, intron 1 of 7) -1742 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak2_207_1173_0.638041485089948_10.516237435655_31.510147053223 chr11 121099163 121103107 + 31.510147053223 NA Intergenic Intergenic 17542 NM_027622 70956 Mm.158506 NM_027622 ENSMUSG00000039337 Tex19.2 4921530G04Rik|Tex19b testis expressed gene 19.2 protein-coding common_peak2_131_568_0.878259727727009_9.59141470617009_31.5071416577944 chr7 119793170 119794901 + 31.5071416577944 NA promoter-TSS (NM_001004187) promoter-TSS (NM_001004187) 23 NM_027698 71151 Mm.274160 NM_027698 ENSMUSG00000030929 Eri2 4933424N09Rik|Exod1|mKIAA1504 exoribonuclease 2 protein-coding common_peak1_93_1209_-0.811047933549581_9.83526736538717_31.4973540753473 chr14 61439165 61440144 + 31.4973540753473 NA intron (NM_008466, intron 1 of 16) CpG 293 NM_008466 16648 Mm.25548 NM_008466 ENSMUSG00000021929 Kpna3 IPOA4 karyopherin (importin) alpha 3 protein-coding common_peak2_99_1280_-0.783814945832551_9.93114728742537_31.4946978834178 chr6 48731039 48734388 + 31.4946978834178 NA Intergenic Intergenic -6334 NM_175860 16205 Mm.252599 NM_008376 ENSMUSG00000090019 Gimap1 IAP38|Imap38|imap GTPase, IMAP family member 1 protein-coding unique_peak2_9_235_-2.41812113291742_6.67358248290313_31.4776914718314 chr6 115594466 115595582 + 31.4776914718314 NA Intergenic Intergenic -2448 NM_001101431 70291 Mm.133694 NM_001101431 ENSMUSG00000068011 Mkrn2os 2510049J12Rik makorin, ring finger protein 2, opposite strand protein-coding common_peak1_68_914_-0.95503261292461_9.3601116267091_31.4502130797109 chr2 32534165 32535208 + 31.4502130797109 NA promoter-TSS (NM_153560) promoter-TSS (NM_153560) -673 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak2_661_6158_0.295524143018667_12.7362424843391_31.427439838809 chr15 38469057 38474215 + 31.427439838809 NA Intergenic Intergenic 18911 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak2_412_3207_0.401604087852375_11.8482604703811_31.4041213222009 chr7 122312143 122318451 + 31.4041213222009 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 26172 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak1_39_580_-1.2646478145874_8.55007044611083_31.3946072473035-2 chr6 124829627 124830232 + 31.3946072473035 NA promoter-TSS (NM_013538) promoter-TSS (NM_013538) -247 NM_013538 14793 Mm.285723 NM_013538 ENSMUSG00000023505 Cdca3 2410005A12Rik|C8|Grcc8|Tome-1 cell division cycle associated 3 protein-coding common_peak1_39_580_-1.2646478145874_8.55007044611083_31.3946072473035 chr3 20034724 20035510 + 31.3946072473035 NA exon (NM_001146323, exon 1 of 17) exon (NM_001146323, exon 1 of 17) 193 NM_001146323 12807 Mm.291533 NM_080634 ENSMUSG00000027615 Hps3 coa Hermansky-Pudlak syndrome 3 protein-coding common_peak2_86_273_1.19476574770533_8.69541495681319_31.3689183408405 chr12 30910930 30912144 + 31.3689183408405 NA promoter-TSS (NM_001110239) promoter-TSS (NM_001110239) 75 NM_021330 11431 Mm.359831 NM_021330 ENSMUSG00000044573 Acp1 4632432E04Rik|AI427468|Acp-1|LMW-PTP|Lmptp acid phosphatase 1, soluble protein-coding common_peak1_33_511_-1.36985142783947_8.31507428608026_31.3659038172536 chr4 129742547 129743174 + 31.3659038172536 NA promoter-TSS (NM_011317) promoter-TSS (NM_011317) -557 NR_045036 20218 Mm.8256 NM_011317 ENSMUSG00000028790 Khdrbs1 Sam68|p62|p68 KH domain containing, RNA binding, signal transduction associated 1 protein-coding common_peak1_15_306_-1.96584158224501_7.27917405424767_31.3384941808321 chr7 79272686 79273019 + 31.3384941808321 NA promoter-TSS (NM_018811) promoter-TSS (NM_018811) -414 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak1_134_1702_-0.663549565960627_10.4020879366982_31.308372842636 chr2 164074004 164075914 + 31.308372842636 NA intron (NM_021420, intron 1 of 10) intron (NM_021420, intron 1 of 10) 781 NM_021420 58231 Mm.234472 NM_021420 ENSMUSG00000018209 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 protein-coding common_peak2_81_1064_-0.868582138861418_9.62234664568249_31.2537345945674 chr17 46327319 46329081 + 31.2537345945674 NA promoter-TSS (NM_170680) promoter-TSS (NM_170680) -177 NM_170680 224814 Mm.76543 NM_145140 ENSMUSG00000032842 Abcc10 Mrp7|mFLJ00002 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 protein-coding unique_peak2_16_317_-1.90934669431018_7.35820960812926_31.2526097213695 chr4 117201910 117203104 + 31.2526097213695 NA Intergenic Intergenic -19883 NM_134471 73804 Mm.247651 NM_134471 ENSMUSG00000028678 Kif2c 4930402F02Rik|ESTM5|Knsl6|MCAK|X83316 kinesin family member 2C protein-coding common_peak2_67_901_-0.960222739908497_9.33687225330113_31.2222845973009 chr16 32107025 32109463 + 31.2222845973009 NA TTS (NM_025892) TTS (NM_025892) 8442 NM_025892 66994 Mm.22990 NM_025892 ENSMUSG00000035790 Cep19 1500031L02Rik|AI428934|AL022620 centrosomal protein 19 protein-coding common_peak1_48_681_-1.13675169211349_8.84525208296743_31.2080724049926 chr19 9899608 9900402 + 31.2080724049926 NA promoter-TSS (NM_016692) promoter-TSS (NM_016692) -472 NM_016692 16319 Mm.29755 NM_016692 ENSMUSG00000024660 Incenp 2700067E22Rik|AU019509|C130081E20|C77457 inner centromere protein protein-coding common_peak2_229_1370_0.592165846378958_10.7170957789687_31.2080153300044 chr11 5739682 5742357 + 31.2080153300044 NA intron (NM_001077661, intron 1 of 5) CpG 157 NM_178623 72046 Mm.271657 NM_178623 ENSMUSG00000049680 Urgcp 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 upregulator of cell proliferation protein-coding common_peak1_514_4368_0.346566080210842_12.2663704305496_31.2077717671988 chr10 77621133 77625393 + 31.2077717671988 NA intron (NM_019803, intron 1 of 5) MLT1E2|LTR|ERVL-MaLR 942 NM_019803 22213 Mm.458125 NM_019803 ENSMUSG00000009293 Ube2g2 1110003O05Rik|D10Xrf369|UBC7|Ubc7p ubiquitin-conjugating enzyme E2G 2 protein-coding common_peak1_55_761_-1.06047012628904_9.0434121243488_31.199196722067 chr2 9878731 9879679 + 31.199196722067 NA promoter-TSS (NM_008091) promoter-TSS (NM_008091) -605 NM_008091 14462 Mm.313866 NM_008091 ENSMUSG00000015619 Gata3 Gata-3|jal GATA binding protein 3 protein-coding common_peak1_75_993_-0.903513215792684_9.50534543366594_31.1974481242866 chr7 143829608 143830271 + 31.1974481242866 NA intron (NM_007856, intron 1 of 8) intron (NM_007856, intron 1 of 8) 6772 NM_007856 13360 Mm.249342 NM_007856 ENSMUSG00000058454 Dhcr7 AA409147 7-dehydrocholesterol reductase protein-coding common_peak2_135_599_0.85455450403736_9.65609594251456_31.1954004516866 chr3 34019400 34021105 + 31.1954004516866 NA intron (NM_008053, intron 1 of 15) CpG 173 NM_001113188 14359 Mm.259021 NM_008053 ENSMUSG00000027680 Fxr1 1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p fragile X mental retardation gene 1, autosomal homolog protein-coding common_peak2_621_5662_0.30636088783284_12.620531258404_31.1912540766784 chr15 6518673 6526664 + 31.1912540766784 NA Intergenic Intergenic -57179 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_74_982_-0.910897898050914_9.48559865731512_31.1886053598821 chrX 48142886 48144354 + 31.1886053598821 NA Intergenic Intergenic -2816 NM_001313749 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding common_peak1_30_476_-1.4311632512712_8.18226383036991_31.1674874326152 chr12 82214567 82214998 + 31.1674874326152 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 44766 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak2_56_116_1.67413399996677_7.70743171956679_31.1571867788635 chr7 139943764 139944796 + 31.1571867788635 NA exon (NM_009482, exon 1 of 2) exon (NM_009482, exon 1 of 2) 424 NM_009482 22286 Mm.10205 NM_009482 ENSMUSG00000047751 Utf1 AI505934 undifferentiated embryonic cell transcription factor 1 protein-coding common_peak1_146_1849_-0.632298802339706_10.5371601542338_31.1569806998294 chr19 47067655 47069045 + 31.1569806998294 NA intron (NM_177342, intron 1 of 10) CpG 602 NM_177342 226182 Mm.301522 NM_177342 ENSMUSG00000025049 Taf5 6330528C20Rik|AV117817 TATA-box binding protein associated factor 5 protein-coding common_peak2_144_666_0.815225950206305_9.78915592628774_31.1556100814763 chr5 8659822 8661354 + 31.1556100814763 NA intron (NM_011076, intron 1 of 27) intron (NM_011076, intron 1 of 27) 496 NM_011076 18671 Mm.207354 NM_011076 ENSMUSG00000040584 Abcb1a Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3 ATP-binding cassette, sub-family B (MDR/TAP), member 1A protein-coding common_peak2_213_1229_0.621140130315528_10.5750126653844_31.1188403943433 chr1 165780038 165782138 + 31.1188403943433 NA Intergenic Intergenic -7593 NM_031162 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_31_487_-1.40787176325136_8.22680145593721_31.1144295980831 chr14 54042147 54042995 + 31.1144295980831 NA Intergenic RMER20C_Mm|LTR|ERVK 211358 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_388_2951_0.415641007926682_11.7352975100237_31.1136036783295 chr15 64058847 64061161 + 31.1136036783295 NA intron (NM_144846, intron 1 of 11) CpG 444 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_1073_11785_0.215504861910802_13.632538981807_31.1070843790817 chr17 29391808 29399341 + 31.1070843790817 NA Intergenic Intergenic 34660 NM_001159538 26382 Mm.279187 NM_013710 ENSMUSG00000024013 Fgd2 Tcd-2|Tcd2|ZFYVE4|tcs-2|tcs2 FYVE, RhoGEF and PH domain containing 2 protein-coding common_peak1_58_796_-1.03290950894865_9.12198115951615_31.1001623251675 chr11 6443900 6444547 + 31.1001623251675 NA intron (NM_029938, intron 1 of 4) CpG 220 NM_029938 77605 Mm.27624 NM_029938 ENSMUSG00000041126 H2afv C530002L11Rik|H2a.z-2|H2av H2A histone family, member V protein-coding common_peak2_235_1425_0.58099276097065_10.7682546469292_31.0986830776445 chr16 94369649 94372137 + 31.0986830776445 NA promoter-TSS (NM_001159616) promoter-TSS (NM_001159616) 122 NM_019543 56176 Mm.474449 NM_019543 ENSMUSG00000022940 Pigp Dcrc|Dscr5 phosphatidylinositol glycan anchor biosynthesis, class P protein-coding common_peak1_84_263_1.20724772849404_8.64801798360547_31.0943426647315 chr19 34290308 34291372 + 31.0943426647315 NA intron (NM_001146708, intron 1 of 2) intron (NM_001146708, intron 1 of 2) 181 NM_001146708 14102 Mm.1626 NM_007987 ENSMUSG00000024778 Fas AI196731|APO1|APT1|CD95|TNFR6|Tnfrsf6|lpr Fas (TNF receptor superfamily member 6) protein-coding common_peak2_293_1973_0.500716789793925_11.1972646693534_31.0897067879347 chr13 101656466 101660713 + 31.0897067879347 NA Intergenic Intergenic 34041 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_27_441_-1.50133780937351_8.03723365470468_31.0841170214402 chr11 16996409 16996969 + 31.0841170214402 NA intron (NM_019549, intron 1 of 9) intron (NM_019549, intron 1 of 9) 12029 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding common_peak2_625_5714_0.304517724078726_12.6327966451412_31.0689606615327 chr10 41472294 41478846 + 31.0689606615327 NA promoter-TSS (NM_138315) promoter-TSS (NM_138315) -744 NM_001164433 171580 Mm.290431 NM_138315 ENSMUSG00000019823 Mical1 MICAL|MICAL-1|Nical microtubule associated monooxygenase, calponin and LIM domain containing 1 protein-coding common_peak1_220_1291_0.607150821355081_10.6389657653715_31.0630190542174 chr7 142340046 142343067 + 31.0630190542174 NA intron (NM_177265, intron 3 of 3) intron (NM_177265, intron 3 of 3) 30703 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_76_1004_-0.896258245293225_9.52485066341968_31.0531962419266 chr8 123027059 123028433 + 31.0531962419266 NA intron (NR_037865, intron 1 of 13) B1_Mus2|SINE|Alu 14538 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_232_2943_-0.487450395183163_11.2798367584654_31.0450920029974 chr7 19815883 19817714 + 31.0450920029974 NA intron (NM_033601, intron 2 of 8) intron (NM_033601, intron 2 of 8) 5957 NM_033601 12051 Mm.439658 NM_033601 ENSMUSG00000053175 Bcl3 AI528691|Bcl-3 B cell leukemia/lymphoma 3 protein-coding common_peak1_78_1027_-0.883525458080562_9.5638618201536_31.0445316440778 chr17 56074625 56075187 + 31.0445316440778 NA promoter-TSS (NM_024432) promoter-TSS (NM_024432) 83 NM_024432 66530 Mm.28000 NM_024432 ENSMUSG00000019578 Ubxn6 1200008L11Rik|2210415J11Rik|AU040909|Ubxd1|Ubxdc2 UBX domain protein 6 protein-coding common_peak2_199_2515_-0.531064081183835_11.0313841662874_31.0375036921485 chr10 45018154 45022901 + 31.0375036921485 NA Intergenic Intergenic -46687 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak1_35_531_-1.32398476244217_8.39329005428011_31.0300213610499 chr2 130273753 130274383 + 31.0300213610499 NA promoter-TSS (NM_024193) promoter-TSS (NM_024193) -344 NM_024193 67134 Mm.29363 NM_024193 ENSMUSG00000027405 Nop56 2310044F10Rik|Nol5a NOP56 ribonucleoprotein protein-coding common_peak1_197_1092_0.653989089328615_10.4210722303362_31.0143580124281 chr15 101976337 101978013 + 31.0143580124281 NA Intergenic Intergenic -22888 NM_212487 332131 Mm.325105 NM_212487 ENSMUSG00000050463 Krt78 2310030B04Rik|Kb40 keratin 78 protein-coding common_peak2_509_4313_0.34757821403168_12.2485995681763_31.012522710643 chr14 54059529 54066758 + 31.012522710643 NA Intergenic MIRb|SINE|MIR 190786 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_162_2046_-0.59545094310204_10.7015699154724_31.0005527593864 chr11 79521980 79524585 + 31.0005527593864 NA intron (NM_001077496, intron 1 of 1) intron (NM_001077496, intron 1 of 1) 480 NM_001077496 216984 Mm.439665 NM_001077496 ENSMUSG00000093938 Evi2b Evi-2|Evi2 ecotropic viral integration site 2b protein-coding common_peak1_18_338_-1.80477725973945_7.50275283326662_30.9969542519017 chr7 28825290 28825668 + 30.9969542519017 NA intron (NM_016772, intron 1 of 9) intron (NM_016772, intron 1 of 9) 141 NM_016772 51798 Mm.291776 NM_016772 ENSMUSG00000053898 Ech1 AA617331 enoyl coenzyme A hydratase 1, peroxisomal protein-coding common_peak1_99_1275_-0.778172799255774_9.92832621413698_30.9861129218841 chr11 83627638 83628958 + 30.9861129218841 NA Intergenic Intergenic 21080 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak1_140_1772_-0.644711217319387_10.469621212239_30.9660662135542 chr19 53398984 53400737 + 30.9660662135542 NA Intergenic B1_Mur2|SINE|Alu -9287 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak2_103_1323_-0.762041539793573_9.98966663691043_30.9640447374161 chr2 75682022 75684093 + 30.9640447374161 NA intron (NM_010902, intron 1 of 4) intron (NM_010902, intron 1 of 4) 21606 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak1_44_633_-1.18216039257478_8.71725883385202_30.937214640019 chr6 48663246 48663986 + 30.937214640019 NA Intergenic MER20|DNA|hAT-Charlie -12519 NM_174960 317758 Mm.116971 NM_174960 ENSMUSG00000051124 Gimap9 A630002K24|BB145400 GTPase, IMAP family member 9 protein-coding common_peak2_87_1132_-0.832909780753852_9.72947725544359_30.9263062016928 chr15 80082249 80084393 + 30.9263062016928 NA promoter-TSS (NM_013762) promoter-TSS (NM_013762) 85 NM_013762 27367 Mm.290771 NM_013762 ENSMUSG00000060036 Rpl3 F2|J1 ribosomal protein L3 protein-coding common_peak1_1071_11762_0.215024517657403_13.6294806860664_30.9129938166976 chr17 29391890 29399127 + 30.9129938166976 NA Intergenic Intergenic 34594 NM_001159538 26382 Mm.279187 NM_013710 ENSMUSG00000024013 Fgd2 Tcd-2|Tcd2|ZFYVE4|tcs-2|tcs2 FYVE, RhoGEF and PH domain containing 2 protein-coding common_peak2_83_1085_-0.854109121633151_9.65775382698779_30.9005627822296 chr10 39612349 39614516 + 30.9005627822296 NA intron (NM_134000, intron 1 of 8) intron (NM_134000, intron 1 of 8) 498 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak1_192_2424_-0.540963739515593_10.9732871622041_30.894046500509 chr9 56464127 56466665 + 30.894046500509 NA intron (NM_025812, intron 1 of 9) intron (NM_025812, intron 1 of 9) 46550 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_52_724_-1.08609541945918_8.9587894751727_30.8906082608644 chr6 129738714 129739700 + 30.8906082608644 NA intron (NM_177155, intron 1 of 5) intron (NM_177155, intron 1 of 5) 1277 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak2_548_7380_-0.296812091483941_12.7011945290955_30.8861046230621 chr5 105647494 105653255 + 30.8861046230621 NA Intergenic Intergenic -49595 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_124_522_0.903453642767762_9.48239395763082_30.8845374575689 chr5 143517301 143519731 + 30.8845374575689 NA intron (NM_009007, intron 1 of 5) intron (NM_009007, intron 1 of 5) 9477 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e RAS-related C3 botulinum substrate 1 protein-coding common_peak1_56_770_-1.04608833036486_9.0675428847326_30.8767263452395 chr1 194995408 194996103 + 30.8767263452395 NA Intergenic Intergenic -18796 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA common_peak2_54_747_-1.06560344150172_9.01409273913678_30.8733308907844 chrX 38599941 38601639 + 30.8733308907844 NA intron (NM_026902, intron 1 of 5) intron (NM_026902, intron 1 of 5) 132 NM_026902 68995 Mm.262453 NM_026902 ENSMUSG00000000355 Mcts1 1500019M23Rik|MCT-1 malignant T cell amplified sequence 1 protein-coding common_peak2_107_1370_-0.745580666566919_10.0482225224958_30.8705088727463 chr14 62761387 62762691 + 30.8705088727463 NA promoter-TSS (NM_008715) promoter-TSS (NM_008715) -927 NM_008715 18130 Mm.319684 NM_008715 ENSMUSG00000035161 Ints6 2900075H24Rik|AI480962|DICE1|Ddx26|HDB|Notch2l integrator complex subunit 6 protein-coding common_peak2_223_1320_0.598986932330165_10.6669082174119_30.8407232862874 chr7 142339792 142343218 + 30.8407232862874 NA intron (NM_177265, intron 3 of 3) intron (NM_177265, intron 3 of 3) 30754 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding unique_peak2_30_474_-1.425101498484_8.17923295397631_30.840535714579 chr5 134265620 134267697 + 30.840535714579 NA intron (NM_001080749, intron 10 of 32) intron (NM_001080749, intron 10 of 32) -37033 NR_104383 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak2_134_594_0.853567295522609_9.64352950595661_30.8337142305111 chr5 134235402 134237765 + 30.8337142305111 NA Intergenic ID_B1|SINE|B4 -6958 NR_104383 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak2_103_381_1.0312170389779_9.0930373475247_30.8212373486821 chr4 142076864 142078750 + 30.8212373486821 NA intron (NM_145402, intron 1 of 2) intron (NM_145402, intron 1 of 2) -6491 NR_027137 100038693 Mm.402714 NR_027137 ENSMUSG00000073728 Tmem51os1 ENSMUSG00000073728|Gm10565|Tmem51as1 Tmem51 opposite strand 1 ncRNA common_peak1_85_1107_-0.841402684608884_9.69304082374475_30.8188699526361 chr19 42089312 42090200 + 30.8188699526361 NA promoter-TSS (NM_145501) promoter-TSS (NM_145501) -679 NM_145501 84095 Mm.117037 NM_145501 ENSMUSG00000025178 Pi4k2a Pi4k2 phosphatidylinositol 4-kinase type 2 alpha protein-coding unique_peak2_37_553_-1.28676565146594_8.47035934031622_30.8155037093318 chr10 128344193 128346040 + 30.8155037093318 NA intron (NM_026444, intron 1 of 10) intron (NM_026444, intron 1 of 10) 7284 NM_026444 12974 Mm.58836 NM_026444 ENSMUSG00000005683 Cs 2610511A05Rik|9030605P22Rik|Ahl4|BB234005|Cis citrate synthase protein-coding common_peak1_109_420_0.990226906505876_9.21278987631933_30.7928673678819 chr7 75571517 75573130 + 30.7928673678819 NA intron (NM_029332, intron 3 of 36) intron (NM_029332, intron 3 of 36) 116789 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_91_306_1.12959058109604_8.8268901359182_30.7798737682971 chr1 91022769 91024049 + 30.7798737682971 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) 24682 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_234_2965_-0.483066208150294_11.2927697783795_30.7766827265835 chr1 172511545 172515473 + 30.7766827265835 NA Intergenic Intergenic -7621 NM_027972 71870 Mm.78373 NM_027972 ENSMUSG00000026546 Cfap45 1700028D05Rik|Ccdc19|Nesg1 cilia and flagella associated protein 45 protein-coding common_peak2_366_2722_0.429113465903026_11.6255379999953_30.7046390579982 chr10 14083886 14088363 + 30.7046390579982 NA intron (NM_010437, intron 2 of 8) intron (NM_010437, intron 2 of 8) 119745 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak2_260_1661_0.538227680048792_10.9678185067947_30.6899580913243 chr6 83455065 83457621 + 30.6899580913243 NA Intergenic CpG 14588 NR_028382 320775 Mm.434334 NR_028382 ENSMUSG00000051844 B230319C09Rik - RIKEN cDNA B230319C09 gene ncRNA common_peak2_94_1213_-0.79708291598047_9.84701124826545_30.6782372611455 chr18 38338152 38339891 + 30.6782372611455 NA promoter-TSS (NM_011937) promoter-TSS (NM_011937) -28 NM_011937 26384 Mm.22374 NM_011937 ENSMUSG00000052102 Gnpda1 GNPDA|Gnp1|Gnpi|oscillin glucosamine-6-phosphate deaminase 1 protein-coding common_peak2_285_1900_0.506259841120231_11.1456727372087_30.6669893543779 chr18 36734004 36736237 + 30.6669893543779 NA promoter-TSS (NM_028036) promoter-TSS (NM_028036) 50 NM_028036 71983 Mm.135188 NM_028036 ENSMUSG00000006850 Tmco6 2410015B03Rik transmembrane and coiled-coil domains 6 protein-coding common_peak2_143_662_0.811657235319148_9.77869367777216_30.6586483124596 chr4 126428583 126430459 + 30.6586483124596 NA promoter-TSS (NM_153402) promoter-TSS (NM_153402) 21 NM_153402 214150 Mm.440915 NM_153402 ENSMUSG00000028842 Ago3 AW048688|C130014L07Rik|Eif2c3 argonaute RISC catalytic subunit 3 protein-coding common_peak2_649_6023_0.295126363725643_12.7040692365347_30.6485716592306 chr10 117838253 117847931 + 30.6485716592306 NA intron (NM_024457, intron 1 of 7) B1_Mus1|SINE|Alu 2882 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak1_45_71_1.99514811383755_7.16749905836109_30.6310920265724 chr3 100438611 100439539 + 30.6310920265724 NA Intergenic Intergenic 12670 NR_040543 73806 Mm.396549 NR_040543 ENSMUSG00000086923 4930406D18Rik - RIKEN cDNA 4930406D18 gene ncRNA unique_peak2_12_267_-2.1372802570032_6.99744906195617_30.6158745560174 chr17 79378866 79379979 + 30.6158745560174 NA Intergenic MTD-int|LTR|ERVL-MaLR -24331 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak2_119_1512_-0.701315217246322_10.2125386635936_30.594740822057 chr11 69990178 69992352 + 30.594740822057 NA promoter-TSS (NM_019749) promoter-TSS (NM_019749) -105 NM_019749 56486 Mm.272460 NM_019749 ENSMUSG00000018567 Gabarap - gamma-aminobutyric acid receptor associated protein protein-coding common_peak1_397_3056_0.405693268146806_11.7807474709604_30.5929669014714 chr13 24799899 24802598 + 30.5929669014714 NA promoter-TSS (NM_024473) promoter-TSS (NM_024473) -409 NM_024473 79555 Mm.266668 NM_024473 ENSMUSG00000019132 BC005537 8030460C05Rik|C78201 cDNA sequence BC005537 protein-coding common_peak2_62_837_-0.989197273747569_9.21620779682557_30.5684629770022 chr8 27022587 27024847 + 30.5684629770022 NA promoter-TSS (NM_153592) promoter-TSS (NM_153592) -82 NM_153592 244373 Mm.277699 NM_153592 ENSMUSG00000031483 Erlin2 BC036333|C87251|Spfh2 ER lipid raft associated 2 protein-coding common_peak2_301_2059_0.486704074101327_11.2517806591212_30.5428332228556 chr1 7087785 7090930 + 30.5428332228556 NA intron (NM_183028, intron 1 of 5) intron (NM_183028, intron 1 of 5) 437 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding common_peak1_176_2216_-0.564732133672198_10.8320269880312_30.5396817190447 chr10 128546916 128549412 + 30.5396817190447 NA promoter-TSS (NM_134003) promoter-TSS (NM_134003) -420 NM_134003 103284 Mm.68289 NM_134003 ENSMUSG00000039810 Zc3h10 AI790326 zinc finger CCCH type containing 10 protein-coding common_peak1_145_678_0.801663573327254_9.80809955090836_30.538872076364 chr2 120730463 120732280 + 30.538872076364 NA intron (NM_026891, intron 1 of 27) CpG 146 NM_026891 68968 Mm.2289 NM_026891 ENSMUSG00000027284 Cdan1 1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI congenital dyserythropoietic anemia, type I (human) protein-coding common_peak1_88_289_1.15310927874925_8.75646372938956_30.5245560433052 chr5 115058245 115059517 + 30.5245560433052 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 47357 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak1_212_1226_0.616374528337396_10.5691067978316_30.5115935343292 chr1 165780164 165782209 + 30.5115935343292 NA Intergenic Intergenic -7495 NM_031162 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_132_1669_-0.661732074699055_10.3747663500119_30.5027611950433 chr7 127511985 127512952 + 30.5027611950433 NA non-coding (NR_024331, exon 1 of 1) non-coding (NR_024331, exon 1 of 1) 401 NR_024331 629159 Mm.256720 NR_024331 ENSMUSG00000101225 1700008J07Rik AW048743 RIKEN cDNA 1700008J07 gene ncRNA common_peak1_28_449_-1.46511787670447_8.0812222528648_30.4847036172743 chr9 21249587 21250214 + 30.4847036172743 NA Intergenic Intergenic -1457 NM_053190 94226 Mm.190619 NM_053190 ENSMUSG00000045087 S1pr5 Edg8|S1P5|lpB4 sphingosine-1-phosphate receptor 5 protein-coding common_peak1_94_1211_-0.79470419319774_9.84582188687408_30.4716934631752 chr10 117917444 117918642 + 30.4716934631752 NA Intergenic Intergenic -7416 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_42_607_-1.20220034318963_8.64682734184877_30.4413153836339 chr9 61702321 61703086 + 30.4413153836339 NA Intergenic Intergenic 211807 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_93_320_1.10331391149007_8.87808644286734_30.4306037668923 chr5 115057979 115059701 + 30.4306037668923 NA intron (NM_029012, intron 1 of 10) MIR|SINE|MIR 47316 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak2_484_4033_0.355448581628767_12.1557196594273_30.4285085320645 chr17 34998521 35003047 + 30.4285085320645 NA promoter-TSS (NM_033075) promoter-TSS (NM_033075) -38 NM_033075 110956 Mm.22506 NM_033075 D17H6S56E-5 G7e DNA segment, Chr 17, human D6S56E 5 protein-coding common_peak1_63_847_-0.978442569065319_9.23869917003054_30.4192431025181 chr6 54956238 54957176 + 30.4192431025181 NA intron (NM_172729, intron 1 of 11) intron (NM_172729, intron 1 of 11) 14954 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_338_2434_0.449947957355979_11.4746800356477_30.4179638431229 chr16 64850502 64853734 + 30.4179638431229 NA promoter-TSS (NM_178647) promoter-TSS (NM_178647) 33 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak2_322_2271_0.464349326486637_11.381921782748_30.4151228590898 chr8 109691762 109694316 + 30.4151228590898 NA intron (NM_028018, intron 1 of 9) CpG 255 NM_028018 71955 Mm.290036 NM_028018 ENSMUSG00000031729 Ist1 2400003C14Rik|AW536298|mKIAA0174 increased sodium tolerance 1 homolog (yeast) protein-coding common_peak2_748_7302_0.268233013386544_12.968390021928_30.4139844665487 chr17 83704607 83709695 + 30.4139844665487 NA intron (NM_001171052, intron 1 of 15) intron (NM_001171052, intron 1 of 15) 988 NM_001171052 116871 Mm.277668 NM_054082 ENSMUSG00000055817 Mta3 1110002J22Rik|mKIAA1266 metastasis associated 3 protein-coding common_peak1_297_2021_0.489970031390962_11.2265522975985_30.4082002229453 chr14 72708941 72710865 + 30.4082002229453 NA promoter-TSS (NM_207636) promoter-TSS (NM_207636) 100 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding common_peak1_136_612_0.836594292844078_9.67804041011282_30.3869429021831 chr11 58103405 58104754 + 30.3869429021831 NA promoter-TSS (NM_026949) promoter-TSS (NM_026949) -74 NM_026949 69125 Mm.28910 NM_026949 ENSMUSG00000020515 Cnot8 1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059 CCR4-NOT transcription complex, subunit 8 protein-coding common_peak2_189_1030_0.665253484093459_10.3424553594148_30.386768964155 chr10 111505755 111507574 + 30.386768964155 NA exon (NM_009344, exon 1 of 2) exon (NM_009344, exon 1 of 2) 378 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_22_381_-1.63896802394224_7.75794481606463_30.3859018812225 chr9 21030961 21031651 + 30.3859018812225 NA promoter-TSS (NM_008319) promoter-TSS (NM_008319) -732 NM_008319 15898 Mm.4629 NM_008319 ENSMUSG00000032174 Icam5 CD50|ICAM-3|Icam3|TLN|Tlcn intercellular adhesion molecule 5, telencephalin protein-coding common_peak1_165_2075_-0.583472548003177_10.7278544543563_30.3820090045081 chr2 126498550 126500525 + 30.3820090045081 NA Intergenic Intergenic -7984 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak2_419_3300_0.390117429826995_11.883746138136_30.3666389115714 chr15 64057079 64061361 + 30.3666389115714 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 1228 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_140_1765_-0.639004024069163_10.4667676156139_30.365027641498 chr10 45019482 45021423 + 30.365027641498 NA Intergenic Intergenic -46762 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak2_37_550_-1.27893199398791_8.4664425115772_30.3615538229402 chr8 11549772 11551343 + 30.3615538229402 NA exon (NM_024248, exon 1 of 15) exon (NM_024248, exon 1 of 15) 214 NM_024248 71941 Mm.196576 NM_024248 ENSMUSG00000056228 Cars2 2310051N18Rik|2410044A07Rik|D530030H10Rik cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) protein-coding common_peak1_52_720_-1.07811368379771_8.95479860734197_30.358473742781 chr7 100495125 100495885 + 30.358473742781 NA intron (NM_011671, intron 2 of 7) intron (NM_011671, intron 2 of 7) 2147 NM_011671 22228 Mm.171378 NM_011671 ENSMUSG00000033685 Ucp2 Slc25a8 uncoupling protein 2 (mitochondrial, proton carrier) protein-coding common_peak1_426_3378_0.38567492514864_11.9152180977381_30.3546013154075 chr12 102365618 102370374 + 30.3546013154075 NA intron (NM_001161365, intron 5 of 9) intron (NM_001161365, intron 5 of 9) 71701 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding common_peak2_435_3478_0.380509894282458_11.9547119107611_30.3440699181258 chr5 140515141 140519912 + 30.3440699181258 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 11917 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_129_562_0.866535719439023_9.57025897179974_30.286475367421 chr10 61203255 61206026 + 30.286475367421 NA intron (NM_001081127, intron 18 of 21) intron (NM_001081127, intron 18 of 21) 29378 NM_023064 65971 Mm.30227 NM_023064 ENSMUSG00000020096 Tbata 1700021K02Rik|AI428928|Spatial|Titest thymus, brain and testes associated protein-coding common_peak1_78_232_1.25791294645904_8.4931426178838_30.2544972487684 chr10 127739452 127740448 + 30.2544972487684 NA intron (NM_198035, intron 1 of 1) CpG 412 NM_198035 320080 Mm.27258 NM_198035 ENSMUSG00000044617 Zbtb39 7030401O21Rik|mKIAA0352 zinc finger and BTB domain containing 39 protein-coding common_peak2_190_1040_0.660617152687378_10.3540629296431_30.2470344605353 chr7 34312656 34314126 + 30.2470344605353 NA Intergenic CpG -27782 NM_172741 233103 Mm.491097 NM_172741 ENSMUSG00000066571 4931406P16Rik AA553327|mKIAA0355 RIKEN cDNA 4931406P16 gene protein-coding common_peak2_84_1091_-0.841115293067361_9.67219949438617_30.2430174135656 chr10 67661822 67664585 + 30.2430174135656 NA Intergenic Intergenic -114248 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_198_2492_-0.526685373644083_11.0203244806695_30.242809983512 chr10 77605222 77607441 + 30.242809983512 NA promoter-TSS (NM_001301671) promoter-TSS (NM_001301671) 234 NM_019929 20610 Mm.24433 NM_019929 ENSMUSG00000020265 Sumo3 2810014B19Rik|D10Ertd345e|SMT3A|SUMO-3|Smt3h1 small ubiquitin-like modifier 3 protein-coding unique_peak2_17_323_-1.83516464101196_7.42226768237865_30.2344883906659 chr19 57063660 57065279 + 30.2344883906659 NA intron (NM_001290813, intron 10 of 20) intron (NM_001290813, intron 10 of 20) 54555 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_254_3220_-0.457516581377037_11.4245346546943_30.2259366516847 chr5 112274267 112276506 + 30.2259366516847 NA Intergenic Intergenic -1321 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_149_710_0.783056269856608_9.86523388454772_30.2218223228667 chr12 81859853 81861413 + 30.2218223228667 NA intron (NM_018814, intron 1 of 35) CpG 603 NM_018814 54604 Mm.86584 NM_018814 ENSMUSG00000021140 Pcnx 2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnx1|Pcnxl1 pecanex homolog (Drosophila) protein-coding common_peak2_362_2687_0.428383938009972_11.6065093917837_30.2023455067365 chr8 120723572 120727141 + 30.2023455067365 NA Intergenic Intergenic -11002 NM_008320 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_194_1074_0.650928092009357_10.3955849904815_30.1893705308289 chr2 132018534 132021584 + 30.1893705308289 NA intron (NM_175445, intron 1 of 10) intron (NM_175445, intron 1 of 10) 9929 NM_175445 215653 Mm.204737 NM_175445 ENSMUSG00000027339 Rassf2 3830431H01Rik|9030412M04Rik|AI852669|AW495050 Ras association (RalGDS/AF-6) domain family member 2 protein-coding common_peak2_57_776_-1.02649516270879_9.08852320705332_30.1811501004811 chr15 75678138 75681012 + 30.1811501004811 NA promoter-TSS (NM_028404) promoter-TSS (NM_028404) -785 NM_028404 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding common_peak1_20_357_-1.70634113346576_7.63064521053138_30.1668032658262 chr9 111138199 111138662 + 30.1668032658262 NA intron (NM_001164838, intron 2 of 14) intron (NM_001164838, intron 2 of 14) 20319 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding unique_peak2_4_169_-3.17148133087964_5.82365027069788_30.1621650167352 chr13 23535389 23535920 + 30.1621650167352 NA exon (NM_145073, exon 1 of 1) exon (NM_145073, exon 1 of 1) 236 NM_145073 97908 Mm.261657 NM_145073 ENSMUSG00000099517 Hist1h3g H3.1-221|M32460 histone cluster 1, H3g protein-coding common_peak1_28_447_-1.45869160754504_8.07800911828509_30.1521703519454 chr17 56009222 56009767 + 30.1521703519454 NA exon (NM_026530, exon 2 of 13) exon (NM_026530, exon 2 of 13) 293 NM_026530 68047 Mm.358710 NM_026530 ENSMUSG00000003199 Mpnd E130307M08Rik MPN domain containing protein-coding common_peak1_58_129_1.58315859201337_7.81394710903514_30.1450083908586 chr12 25214065 25215206 + 30.1450083908586 NA Intergenic Intergenic 85461 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_48_673_-1.11972854427117_8.83674050904627_30.1096710157292 chr2 91236285 91237953 + 30.1096710157292 NA promoter-TSS (NR_015464) promoter-TSS (NR_015464) -27 NR_015464 606735 Mm.246808 NR_015464 ENSMUSG00000097868 A330069E16Rik - RIKEN cDNA A330069E16 gene ncRNA common_peak2_805_8066_0.254482890401468_13.1050579857948_30.0992576981663 chr10 19491745 19500994 + 30.0992576981663 NA Intergenic MTA_Mm|LTR|ERVL-MaLR -95589 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak2_198_2490_-0.525527512393419_11.0197455500441_30.0990390102629 chr16 55947368 55952449 + 30.0990390102629 NA Intergenic B2_Mm2|SINE|B2 -15060 NM_001159365 74201 Mm.178427 NM_028815 ENSMUSG00000022604 Cep97 2810403B08Rik|4932439K18Rik|AA437768|E130116N02Rik|Lrriq2 centrosomal protein 97 protein-coding common_peak1_88_1136_-0.81799817012806_9.74201745382822_30.0788120909261 chr3 79238207 79239657 + 30.0788120909261 NA intron (NR_045502, intron 1 of 2) intron (NR_045502, intron 1 of 2) 26013 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak1_473_3913_0.358417877826152_12.1136369795399_30.0650946934064 chr18 6489838 6491516 + 30.0650946934064 NA promoter-TSS (NR_035446) promoter-TSS (NR_035446) -31 NR_035446 100316773 NR_035446 ENSMUSG00000084514 Mir1893 Mirn1893|mmu-mir-1893 microRNA 1893 ncRNA common_peak2_72_949_-0.909464676832682_9.43705136480197_30.0598155177924 chr17 56008314 56010308 + 30.0598155177924 NA intron (NM_026530, intron 1 of 12) CpG 110 NM_026530 68047 Mm.358710 NM_026530 ENSMUSG00000003199 Mpnd E130307M08Rik MPN domain containing protein-coding common_peak1_81_250_1.21651202230101_8.57979956510128_30.0314998044204 chr14 73552721 73553623 + 30.0314998044204 NA intron (NM_011506, intron 1 of 10) CpG 386 NM_011506 20916 Mm.38951 NM_011506 ENSMUSG00000022110 Sucla2 4930547K18Rik|A-SCS succinate-Coenzyme A ligase, ADP-forming, beta subunit protein-coding common_peak1_668_6277_0.28652907652557_12.7593538518449_30.0278783457816 chr2 31808777 31812677 + 30.0278783457816 NA promoter-TSS (NM_183424) promoter-TSS (NM_183424) -147 NM_183424 227717 Mm.185027 NM_183424 ENSMUSG00000043102 Qrfp P518 pyroglutamylated RFamide peptide protein-coding common_peak2_97_1242_-0.776122032955444_9.89154956457476_30.0256849450291 chr11 95858035 95860071 + 30.0256849450291 NA non-coding (NR_045187, exon 1 of 2) non-coding (NR_045187, exon 1 of 2) 236 NR_045187 73906 Mm.399894 NR_045187 ENSMUSG00000086015 4833417C18Rik - RIKEN cDNA 4833417C18 gene ncRNA common_peak2_415_3261_0.390329422674473_11.8667057780491_30.0181958066607 chr7 142351578 142358106 + 30.0181958066607 NA intron (NM_177265, intron 2 of 3) intron (NM_177265, intron 2 of 3) 17417 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_434_3472_0.378936722162081_11.9514350564631_30.0149807183097 chr12 25238671 25241955 + 30.0149807183097 NA Intergenic Intergenic 111139 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_91_1171_-0.803071427956025_9.79322114044423_30.0083948175358 chr13 22042520 22043869 + 30.0083948175358 NA promoter-TSS (NM_178198) promoter-TSS (NM_178198) -36 NM_178198 319183 Mm.371766 NM_178198 ENSMUSG00000069300 Hist1h2bj - histone cluster 1, H2bj protein-coding common_peak2_160_797_0.741751977136634_10.0111209247907_30.004778227772 chr5 36581086 36582827 + 30.004778227772 NA intron (NM_001113362, intron 2 of 14) CpG 441 NM_133910 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding common_peak1_186_1008_0.668207214995666_10.3128140666042_30.0042590446879 chr10 85871251 85872645 + 30.0042590446879 NA exon (NM_133993, exon 1 of 15) exon (NM_133993, exon 1 of 15) 117 NM_133993 103136 Mm.18834 NM_133993 ENSMUSG00000001785 Pwp1 2310058A11Rik|2610205J09Rik|AI098170|AL022879|AV083409|AW550690 PWP1 homolog, endonuclein protein-coding common_peak2_145_682_0.793189569281896_9.81233655293104_29.991241906505 chr2 120730533 120732372 + 29.991241906505 NA promoter-TSS (NM_026891) promoter-TSS (NM_026891) 65 NM_026891 68968 Mm.2289 NM_026891 ENSMUSG00000027284 Cdan1 1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI congenital dyserythropoietic anemia, type I (human) protein-coding unique_peak2_31_480_-1.38702750945852_8.21637932904078_29.9876157902207 chr3 146684601 146686756 + 29.9876157902207 NA Intergenic Intergenic -34361 NM_029144 75015 Mm.250432 NM_029144 ENSMUSG00000048652 4930503B20Rik 1700013A07Rik|1700095G21Rik|4930483N21Rik|Gm1652|Samd13 RIKEN cDNA 4930503B20 gene protein-coding common_peak2_642_5950_0.293555128831576_12.6856939668799_29.9685696101674 chr6 125478731 125486406 + 29.9685696101674 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 12187 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak1_288_1938_0.496171415461808_11.1691827958377_29.9630259089549 chr2 30710706 30713333 + 29.9630259089549 NA Intergenic CpG -9191 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_631_5812_0.296868831440499_12.6535016089521_29.9628942602486 chr13 58126960 58130021 + 29.9628942602486 NA promoter-TSS (NM_029872) promoter-TSS (NM_029872) 66 NM_029872 77134 Mm.490274 NM_029872 ENSMUSG00000007836 Hnrnpa0 1110055B05Rik|3010025E17Rik|Hnrpa0|hnRNP A0 heterogeneous nuclear ribonucleoprotein A0 protein-coding common_peak2_40_581_-1.22343207784286_8.57315930398685_29.9610800702478 chr9 40481733 40483423 + 29.9610800702478 NA Intergenic Intergenic -26814 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak1_114_1444_-0.710287386416212_10.1417100841799_29.9609742858681 chr11 96987720 96988897 + 29.9609742858681 NA Intergenic Intergenic -10620 NM_001080964 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak2_45_638_-1.15459900566713_8.74237261811343_29.9603705879989 chr9 88522162 88523853 + 29.9603705879989 NA promoter-TSS (NR_040721) promoter-TSS (NR_040721) -110 NR_040721 72655 Mm.21798 NR_040721 ENSMUSG00000097195 Snhg5 2810026P18Rik|4933428I09Rik|mU50HG-b small nucleolar RNA host gene 5 ncRNA common_peak1_133_1674_-0.652789368896418_10.3835506957843_29.9515734780465 chr9 58581049 58582186 + 29.9515734780465 NA promoter-TSS (NM_001293673) promoter-TSS (NM_001293673) -623 NM_001293673 20320 Mm.15125 NM_009145 ENSMUSG00000032336 Nptn AW554172|SDR-1|Sdfr1 neuroplastin protein-coding common_peak2_41_593_-1.21023216581591_8.60920303789281_29.9446853140494 chr7 34653659 34656072 + 29.9446853140494 NA Intergenic CpG -2024 NM_146188 233107 Mm.486198 NM_146188 ENSMUSG00000030499 Kctd15 BC031749 potassium channel tetramerisation domain containing 15 protein-coding common_peak2_102_1301_-0.754965849388896_9.96903080847119_29.9411764523356 chr7 3442107 3445796 + 29.9411764523356 NA Intergenic Intergenic 19289 NM_133183 54378 Mm.424047 NM_133183 ENSMUSG00000078815 Cacng6 2310033H20Rik calcium channel, voltage-dependent, gamma subunit 6 protein-coding common_peak1_101_1288_-0.757753460047839_9.95315981833773_29.9384256779514 chr6 108503863 108505378 + 29.9384256779514 NA intron (NM_010585, intron 53 of 61) intron (NM_010585, intron 53 of 61) 14877 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_66_169_1.42115276401202_8.11996731814371_29.8566018868525 chr15 86073599 86074993 + 29.8566018868525 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 15569 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding unique_peak1_40_54_2.18008355154077_6.87140148929504_29.8389027029305 chr8 124302025 124302828 + 29.8389027029305 NA intron (NM_139272, intron 2 of 15) intron (NM_139272, intron 2 of 15) 71032 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_26_422_-1.50230628628035_7.97336070997977_29.8365480106733 chr11 78697667 78698120 + 29.8365480106733 NA promoter-TSS (NM_008702) promoter-TSS (NM_008702) -468 NM_008702 18099 Mm.9001 NM_008702 ENSMUSG00000017376 Nlk AI194375 nemo like kinase protein-coding common_peak1_345_2515_0.438906635799619_11.5163695247791_29.8318515442572 chr13 85288215 85290141 + 29.8318515442572 NA 5' UTR (NM_145452, exon 1 of 25) 5' UTR (NM_145452, exon 1 of 25) 308 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak1_149_713_0.776981755446926_9.86827114175256_29.8217299863714 chr12 81859855 81861449 + 29.8217299863714 NA intron (NM_018814, intron 1 of 35) CpG 622 NM_018814 54604 Mm.86584 NM_018814 ENSMUSG00000021140 Pcnx 2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnx1|Pcnxl1 pecanex homolog (Drosophila) protein-coding common_peak1_107_1359_-0.733958746925396_10.042411562675_29.8029746362906 chr6 122302982 122304463 + 29.8029746362906 NA Intergenic Intergenic -5288 NM_010749 17113 Mm.249225 NM_010749 ENSMUSG00000007458 M6pr CD-MPR|Mpr46 mannose-6-phosphate receptor, cation dependent protein-coding common_peak1_91_1169_-0.800607388004543_9.79198912046849_29.8005424175236 chrX 73716590 73718066 + 29.8005424175236 NA exon (NM_007435, exon 1 of 10) exon (NM_007435, exon 1 of 10) 487 NM_001313698 27061 Mm.17 NM_012060 ENSMUSG00000002015 Bcap31 Bap31 B cell receptor associated protein 31 protein-coding common_peak1_67_889_-0.940900642506877_9.32721120460032_29.7867038124315 chr15 80571363 80572448 + 29.7867038124315 NA promoter-TSS (NM_001289442) promoter-TSS (NM_001289442) -692 NM_001289442 17444 Mm.12947 NM_010815 ENSMUSG00000042351 Grap2 GRAP-2|GRB2L|GRBLG|GRID|Gads|GrbX|Grf40|GrpL|Mona|P38 GRB2-related adaptor protein 2 protein-coding common_peak2_57_125_1.59799570219901_7.77627777459942_29.7682136391182 chr10 56106801 56107583 + 29.7682136391182 NA intron (NM_001163833, intron 1 of 1) intron (NM_001163833, intron 1 of 1) 275 NM_001163833 73390 Mm.181475 NM_133751 ENSMUSG00000047669 Msl3l2 1700060H10Rik male-specific lethal 3-like 2 (Drosophila) protein-coding common_peak2_37_546_-1.26842050820931_8.4611867686879_29.7595203446817 chr7 30089676 30091432 + 29.7595203446817 NA promoter-TSS (NM_152814) promoter-TSS (NM_152814) -44 NM_152814 72556 Mm.441512 NM_152814 ENSMUSG00000078768 Zfp566 2700043M03Rik|mszf4 zinc finger protein 566 protein-coding common_peak1_29_456_-1.42739392246037_8.12235339382789_29.7545595808763 chr6 128796003 128796449 + 29.7545595808763 NA Intergenic L1ME1|LINE|L1 -7585 NM_001159904 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak2_424_3365_0.382927973400863_11.9082834480304_29.7518790187309 chr10 19183610 19189063 + 29.7518790187309 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 19098 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_698_6668_0.276991343278986_12.8417504053876_29.7413377924551 chr12 80111246 80116789 + 29.7413377924551 NA Intergenic Intergenic -1004 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak2_600_5432_0.30540023425301_12.5602334487978_29.7388967400588 chr6 114871951 114878601 + 29.7388967400588 NA intron (NM_177683, intron 2 of 4) intron (NM_177683, intron 2 of 4) 46476 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_61_819_-0.986185583584783_9.18638730771305_29.7311979726503 chr7 30279985 30281169 + 29.7311979726503 NA promoter-TSS (NM_146186) promoter-TSS (NM_146186) -156 NM_146186 233064 Mm.271677 NM_146186 ENSMUSG00000037020 Wdr62 2310038K02Rik WD repeat domain 62 protein-coding unique_peak1_29_20_3.01633900981894_5.90048692768823_29.7304615383691 chr15 96270120 96270771 + 29.7304615383691 NA non-coding (NR_030690, exon 1 of 1) non-coding (NR_030690, exon 1 of 1) 4830 NR_030690 319722 Mm.103823 NR_030690 E330033B04Rik - RIKEN cDNA E330033B04 gene ncRNA common_peak2_152_1906_-0.605283835032015_10.5944472107967_29.7239863362362 chr2 31080651 31084278 + 29.7239863362362 NA intron (NM_001177648, intron 6 of 16) intron (NM_001177648, intron 6 of 16) 14036 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_66_876_-0.945889332295009_9.30348836629723_29.7197448698553 chr8 83772716 83773677 + 29.7197448698553 NA Intergenic L2|LINE|L2 -31885 NM_001163031 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak2_292_1980_0.489580498303363_11.1968034140412_29.7038241007912 chr18 35872885 35875876 + 29.7038241007912 NA Intergenic Intergenic 44562 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_190_1045_0.653704369739852_10.3575193211169_29.6950127846745 chr5 35672173 35674226 + 29.6950127846745 NA intron (NM_030127, intron 1 of 8) intron (NM_030127, intron 1 of 8) 6581 NM_001042615 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak2_76_992_-0.878928366755307_9.51618572415072_29.6947639998633 chr3 88295934 88298108 + 29.6947639998633 NA promoter-TSS (NM_009836) promoter-TSS (NM_009836) -114 NM_009836 12462 Mm.256034 NM_009836 ENSMUSG00000001416 Cct3 AL024092|Cctg|Tcp1-rs3|TriC-P5 chaperonin containing Tcp1, subunit 3 (gamma) protein-coding common_peak2_79_1027_-0.86126569919039_9.57499169959868_29.6890278641501 chr17 25874038 25876439 + 29.6890278641501 NA promoter-TSS (NM_026686) promoter-TSS (NM_026686) -262 NM_026686 68347 Mm.35098 NM_026686 ENSMUSG00000025731 Mettl26 0610011F06Rik methyltransferase like 26 protein-coding common_peak2_103_1310_-0.747806103208111_9.9825489186177_29.6803230745199 chr10 120632723 120637285 + 29.6803230745199 NA Intergenic Intergenic -130728 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak2_16_309_-1.87258814430007_7.3398303331242_29.6791157159852 chr12 69258004 69259236 + 29.6791157159852 NA exon (NM_178253, exon 8 of 13) exon (NM_178253, exon 8 of 13) 16788 NM_178253 271005 Mm.180969 NM_178253 ENSMUSG00000051890 Klhdc1 - kelch domain containing 1 protein-coding common_peak1_57_772_-1.01904897822592_9.08480011481189_29.6723952770456 chr7 45016903 45017700 + 29.6723952770456 NA promoter-TSS (NM_009101) promoter-TSS (NM_009101) -706 NM_009101 20130 Mm.389894 NM_009101 ENSMUSG00000038387 Rras AI573426 related RAS viral (r-ras) oncogene protein-coding common_peak1_68_899_-0.931185870970243_9.34818825573192_29.6653897580219 chr12 102350501 102351777 + 29.6653897580219 NA intron (NM_001161365, intron 4 of 9) intron (NM_001161365, intron 4 of 9) 67498 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_517_4432_0.335864424497974_12.2819998594143_29.6586377118174 chr12 100990310 100998574 + 29.6586377118174 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 27326 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak1_144_677_0.791627438254546_9.80095518226362_29.6371453321239 chr7 122309484 122311359 + 29.6371453321239 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 21296 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak1_24_399_-1.55784099763834_7.86493569095556_29.6322812118987 chr14 20393108 20393616 + 29.6322812118987 NA TTS (NM_001163639) TTS (NM_001163639) 193 NM_025440 66242 Mm.23747 NM_025440 ENSMUSG00000049960 Mrps16 1500011E11Rik|Mprs16 mitochondrial ribosomal protein S16 protein-coding common_peak1_534_4634_0.328722382721201_12.3427148148735_29.6280921476768 chr1 55026279 55030850 + 29.6280921476768 NA Intergenic Intergenic -1086 NM_031179 81898 Mm.279736 NM_031179 ENSMUSG00000025982 Sf3b1 155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4 splicing factor 3b, subunit 1 protein-coding unique_peak1_49_90_1.80483286312404_7.41021107176072_29.6255716904862 chr3 9499293 9500210 + 29.6255716904862 NA intron (NM_133218, intron 2 of 8) intron (NM_133218, intron 2 of 8) 96673 NR_015499 320088 Mm.212908 NR_015499 ENSMUSG00000097365 C030034L19Rik A130044O20Rik RIKEN cDNA C030034L19 gene ncRNA unique_peak2_5_180_-2.93929504136382_6.0301983664013_29.6207156759065 chr10 41899318 41900510 + 29.6207156759065 NA intron (NM_001162908, intron 5 of 9) intron (NM_001162908, intron 5 of 9) 12475 NM_001013370 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding common_peak2_397_3071_0.398631604312619_11.7842783028775_29.6204297682078 chr9 90112782 90115370 + 29.6204297682078 NA intron (NM_024431, intron 1 of 11) CpG 744 NM_001039147 21761 Mm.426209 NM_024431 ENSMUSG00000062270 Morf4l1 MORFRG15|MRG15|TEG-189|Tex189|mKIAA4002 mortality factor 4 like 1 protein-coding common_peak1_65_864_-0.952624063676851_9.28024429068566_29.6095618471822 chr16 55949110 55949990 + 29.6095618471822 NA Intergenic Intergenic -14702 NM_001159365 74201 Mm.178427 NM_028815 ENSMUSG00000022604 Cep97 2810403B08Rik|4932439K18Rik|AA437768|E130116N02Rik|Lrriq2 centrosomal protein 97 protein-coding common_peak1_75_979_-0.883049113232968_9.49511338238609_29.6025790051218 chr11 77348099 77349217 + 29.6025790051218 NA intron (NM_001291190, intron 1 of 13) CpG 378 NM_001291190 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot homolog 2 (Drosophila) protein-coding common_peak1_140_647_0.807415600694679_9.74355780323196_29.589285169338 chr4 126428679 126430259 + 29.589285169338 NA promoter-TSS (NM_153402) promoter-TSS (NM_153402) 73 NM_153402 214150 Mm.440915 NM_153402 ENSMUSG00000028842 Ago3 AW048688|C130014L07Rik|Eif2c3 argonaute RISC catalytic subunit 3 protein-coding common_peak2_145_685_0.786866571399173_9.8154980518724_29.5847647130103 chr9 50658868 50660381 + 29.5847647130103 NA 5' UTR (NM_145614, exon 1 of 14) 5' UTR (NM_145614, exon 1 of 14) 156 NM_145614 235339 Mm.285076 NM_145614 ENSMUSG00000000168 Dlat 6332404G05Rik|DLTA|PDC-E2 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) protein-coding common_peak2_84_270_1.16949280649862_8.66689544460318_29.5820903673138 chr2 151972816 151974373 + 29.5820903673138 NA promoter-TSS (NM_001289151) promoter-TSS (NM_001289151) -200 NM_001289151 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak1_36_534_-1.2836114300771_8.42158936624996_29.5796729746308 chr1 165842875 165843670 + 29.5796729746308 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 54591 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak2_478_3979_0.352862392277427_12.1349839115697_29.5794600102097 chr14 56281562 56289716 + 29.5794600102097 NA Intergenic Intergenic -23379 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding unique_peak2_13_274_-2.04333536958045_7.0816201236218_29.5736812743814 chr17 18967859 18969616 + 29.5736812743814 NA Intergenic IAPLTR3-int|LTR|ERVK 54415 NM_001104549 627367 Mm.384131 NM_001104549 ENSMUSG00000091491 Vmn2r97 EG627367|Vn2r97 vomeronasal 2, receptor 97 protein-coding common_peak1_43_66_2.02032086342254_7.07624962216904_29.5679654793077 chr9 120040585 120041454 + 29.5679654793077 NA Intergenic B4A|SINE|B4 -17421 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak2_205_1174_0.619715153510734_10.5083026182077_29.5450610414884 chr5 35672404 35674969 + 29.5450610414884 NA intron (NM_030127, intron 1 of 8) intron (NM_030127, intron 1 of 8) 6094 NM_001042615 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding common_peak2_162_817_0.727887410979621_10.0399007384316_29.5418147436306 chr11 60209435 60211666 + 29.5418147436306 NA intron (NM_011480, intron 1 of 18) CpG -8223 NR_105887 102465556 NR_105887 ENSMUSG00000099259 Mir6922 Gm27269|mmu-mir-6922 microRNA 6922 ncRNA common_peak2_169_2114_-0.568187788968464_10.7623480535231_29.5220444620228 chr7 3692206 3695111 + 29.5220444620228 NA promoter-TSS (NM_001164205) promoter-TSS (NM_001164205) 48 NM_001164205 66078 Mm.379100 NM_024168 ENSMUSG00000035585 Tsen34 0610027F08Rik|Leng5 tRNA splicing endonuclease subunit 34 protein-coding common_peak1_140_1755_-0.630811525956055_10.4626713665573_29.5145899557658 chr1 105980163 105981677 + 29.5145899557658 NA Intergenic Intergenic -9486 NM_001122676 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding common_peak2_150_723_0.768674497902346_9.88418313603438_29.5126924175989 chr6 99665474 99667255 + 29.5126924175989 NA intron (NM_025829, intron 1 of 6) intron (NM_025829, intron 1 of 6) 407 NM_025829 66892 Mm.32889 NM_025829 ENSMUSG00000093661 Eif4e3 1300018P11Rik|AI451927|eIF4E-3 eukaryotic translation initiation factor 4E member 3 protein-coding common_peak2_410_3215_0.389420381509217_11.8457618819335_29.506060417606 chr10 75323984 75330156 + 29.506060417606 NA intron (NM_009630, intron 2 of 2) intron (NM_009630, intron 2 of 2) 10193 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak2_435_3492_0.374715930507485_11.9576088926486_29.495434762894 chr5 29734884 29739084 + 29.495434762894 NA intron (NM_001037940, intron 1 of 9) intron (NM_001037940, intron 1 of 9) -1048 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993|ENSMUSG00000053121 predicted gene 5129 ncRNA common_peak1_28_443_-1.44575255183754_8.07153959043134_29.4902273579321 chr8 11550147 11550876 + 29.4902273579321 NA exon (NM_024248, exon 1 of 15) exon (NM_024248, exon 1 of 15) 260 NM_024248 71941 Mm.196576 NM_024248 ENSMUSG00000056228 Cars2 2310051N18Rik|2410044A07Rik|D530030H10Rik cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) protein-coding unique_peak2_10_239_-2.27370516410092_6.77003801355806_29.4848207293181 chr11 115964219 115965946 + 29.4848207293181 NA 3' UTR (NM_020483, exon 11 of 11) 3' UTR (NM_020483, exon 11 of 11) -9643 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding common_peak1_18_330_-1.77032320341033_7.48552580510205_29.4745938920274 chrX 136742390 136742845 + 29.4745938920274 NA promoter-TSS (NR_033324) promoter-TSS (NR_033324) 301 NM_001168227 56397 Mm.27218 NM_019768 ENSMUSG00000031422 Morf4l2 2410017O14Rik|Mrgx|Sid393p|mKIAA0026 mortality factor 4 like 2 protein-coding common_peak1_220_1307_0.589394350550922_10.6478440007735_29.4708222690177 chr6 83914325 83915382 + 29.4708222690177 NA intron (NM_008717, intron 1 of 26) CpG 500 NM_008717 18139 Mm.132392 NM_008717 ENSMUSG00000030016 Zfp638 AI323587|Np220|Zfml|Znf638|mNP220 zinc finger protein 638 protein-coding common_peak2_56_759_-1.02535688878077_9.05717716394056_29.4637320598506 chr5 113951507 113953740 + 29.4637320598506 NA intron (NM_198109, intron 11 of 14) intron (NM_198109, intron 11 of 14) 41134 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot homolog 1 (Drosophila) protein-coding common_peak2_186_1013_0.661075737098683_10.3163798055527_29.4459762060642 chr16 45157843 45159891 + 29.4459762060642 NA promoter-TSS (NM_026402) promoter-TSS (NM_026402) 38 NM_026402 67841 Mm.41775 NM_026402 ENSMUSG00000022663 Atg3 2610016C12Rik|APG3|Apg3l|Atg3l|PC3-96 autophagy related 3 protein-coding common_peak2_365_2730_0.420052679621326_11.6252399385759_29.4438695785195 chr11 21171397 21177787 + 29.4438695785195 NA Intergenic Intergenic -64440 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak1_48_668_-1.10898616373078_8.83136931877607_29.4297677950521 chr19 46760821 46761369 + 29.4297677950521 NA promoter-TSS (NM_033569) promoter-TSS (NM_033569) -514 NM_033569 94219 Mm.306903 NM_033569 ENSMUSG00000064105 Cnnm2 AU015877|AW048635|Acdp2|Clp2 cyclin M2 protein-coding common_peak2_264_1713_0.520695958208934_11.003499373217_29.4233382584738 chr7 45717151 45719468 + 29.4233382584738 NA promoter-TSS (NM_203280) promoter-TSS (NM_203280) 238 NM_009077 19899 Mm.3459 NM_009077 ENSMUSG00000059070 Rpl18 L18|Rpl18a ribosomal protein L18 protein-coding common_peak1_92_1177_-0.79130710294287_9.80647027235903_29.4049133748072 chr17 28012603 28014146 + 29.4049133748072 NA intron (NM_001286040, intron 12 of 24) intron (NM_001286040, intron 12 of 24) 67210 NM_013687 21463 Mm.29758 NM_013687 ENSMUSG00000062859 Tcp11 D17Ken1|Tcp-11 t-complex protein 11 protein-coding common_peak1_91_1165_-0.795666646734274_9.78951874983336_29.3864664355718 chr5 149183589 149184279 + 29.3864664355718 NA promoter-TSS (NM_001286825) promoter-TSS (NM_001286825) -626 NM_001115153 231915 Mm.29402 NM_001013378 ENSMUSG00000041264 Uspl1 E430026A01Rik ubiquitin specific peptidase like 1 protein-coding common_peak1_81_1047_-0.845367425285668_9.61073928889462_29.3830708917545 chr2 166552957 166554299 + 29.3830708917545 NA Intergenic RMER4A|LTR|ERVK 106177 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak1_922_9686_0.230330234586713_13.3569993436285_29.3778567729659 chr7 16398892 16404120 + 29.3778567729659 NA intron (NM_198631, intron 1 of 13) intron (NM_198631, intron 1 of 13) 310 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak2_118_490_0.907493155924952_9.39332579227717_29.3509360954258 chr4 19574484 19575920 + 29.3509360954258 NA 5' UTR (NM_025476, exon 1 of 10) 5' UTR (NM_025476, exon 1 of 10) 136 NM_025476 66302 Mm.440686 NM_025476 ENSMUSG00000028229 Rmdn1 Fam82b|RMD-1 regulator of microtubule dynamics 1 protein-coding common_peak1_302_3846_-0.408535404537874_11.7052504120277_29.3340842451721 chr15 102245525 102248337 + 29.3340842451721 NA promoter-TSS (NM_001042727) promoter-TSS (NM_001042727) -431 NM_001042727 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding common_peak1_110_1390_-0.717988537177543_10.0829124359535_29.3310567411649 chr8 57406471 57408328 + 29.3310567411649 NA Intergenic (TTTTC)n|Simple_repeat|Simple_repeat -48524 NM_009136 20284 Mm.12886 NM_009136 ENSMUSG00000031610 Scrg1 AW124307 scrapie responsive gene 1 protein-coding common_peak1_112_1413_-0.710046906636999_10.1105429514909_29.3294576056455 chr2 27514036 27515784 + 29.3294576056455 NA promoter-TSS (NM_080848) promoter-TSS (NM_080848) -237 NM_080848 140858 Mm.28265 NM_080848 ENSMUSG00000026917 Wdr5 2410008O07Rik|AA408785|AA960360|Big|Big-3 WD repeat domain 5 protein-coding common_peak2_583_5232_0.30873341632998_12.5077892517797_29.3209579512669 chr18 23802126 23809562 + 29.3209579512669 NA intron (NM_153058, intron 1 of 6) intron (NM_153058, intron 1 of 6) 1874 NM_153058 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak1_113_456_0.935060675678461_9.3035806928973_29.3172021199856 chr19 10995001 10996804 + 29.3172021199856 NA Intergenic Intergenic -2652 NM_001034898 545279 Mm.329729 NM_001034898 ENSMUSG00000067571 Ms4a15 E530011F12Rik|Gm1286 membrane-spanning 4-domains, subfamily A, member 15 protein-coding common_peak1_54_735_-1.0422709376711_9.00242648722146_29.3104115410268 chr11 96978014 96978786 + 29.3104115410268 NA promoter-TSS (NM_001080964) promoter-TSS (NM_001080964) -712 NM_001080964 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak2_80_248_1.2063401509248_8.56317200753048_29.3076795888617 chr16 57548819 57550215 + 29.3076795888617 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 275 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_52_712_-1.06201650100078_8.9467500159435_29.3035392774022 chr14 27405650 27406478 + 29.3035392774022 NA Intergenic MTD|LTR|ERVL-MaLR -22783 NM_028945 218850 Mm.247767 NM_028945 ENSMUSG00000040651 Fam208a 4732418E12|4933409E02Rik|D14Abb1e|MommeD6 family with sequence similarity 208, member A protein-coding common_peak1_274_1810_0.506825774314068_11.0759837181072_29.290935547035 chr10 96398614 96401042 + 29.290935547035 NA Intergenic Intergenic 173621 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_115_470_0.922304687272497_9.34073559324903_29.2834086002687 chr16 13109211 13110649 + 29.2834086002687 NA 5' UTR (NM_015769, exon 1 of 11) 5' UTR (NM_015769, exon 1 of 11) 194 NM_015769 50505 Mm.287837 NM_015769 ENSMUSG00000022545 Ercc4 AI606920|Xpf excision repair cross-complementing rodent repair deficiency, complementation group 4 protein-coding common_peak2_187_2338_-0.535320436553697_10.9240159280756_29.2657971231607 chr5 72633629 72637413 + 29.2657971231607 NA intron (NM_007723, intron 1 of 8) intron (NM_007723, intron 1 of 8) 7231 NM_007723 12788 Mm.436652 NM_007723 ENSMUSG00000067220 Cnga1 Cncg cyclic nucleotide gated channel alpha 1 protein-coding unique_peak1_23_7_4.01377546809209_5.00688773404605_29.2615767763188 chr5 74035845 74036337 + 29.2615767763188 NA intron (NM_177561, intron 2 of 8) RMER15|LTR|ERVL 32320 NM_177561 69727 Mm.48795 NM_177561 ENSMUSG00000054814 Usp46 1190009E20Rik|2410018I08Rik|AI451644 ubiquitin specific peptidase 46 protein-coding common_peak1_93_326_1.07659657311429_8.89144511205523_29.2583085460562 chr14 18330973 18332262 + 29.2583085460562 NA intron (NM_009455, intron 1 of 5) CpG 227 NM_009455 22194 Mm.4429 NM_009455 ENSMUSG00000021774 Ube2e1 UbcM3|Ubce5|ubcM2 ubiquitin-conjugating enzyme E2E 1 protein-coding common_peak1_114_463_0.928585395844257_9.3222736930497_29.2400536504961 chr2 33430620 33431895 + 29.2400536504961 NA promoter-TSS (NM_001085507) promoter-TSS (NM_001085507) 67 NM_001085507 241311 Mm.296512 NM_001085507 ENSMUSG00000068966 Zbtb34 Gm349|mKIAA1993 zinc finger and BTB domain containing 34 protein-coding unique_peak2_14_284_-1.97277398764076_7.16843111523173_29.2311626578044 chr3 109132521 109133968 + 29.2311626578044 NA intron (NM_172685, intron 1 of 9) intron (NM_172685, intron 1 of 9) 10095 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak1_129_1618_-0.657360438783314_10.3322070509109_29.2195410524393 chr10 128747215 128748759 + 29.2195410524393 NA promoter-TSS (NM_001253704) promoter-TSS (NM_001253704) 108 NM_001253705 78428 Mm.27358 NM_030100 ENSMUSG00000064030 Pym1 A030010B05Rik|Pym|Wibg PYM homolog 1, exon junction complex associated factor protein-coding common_peak2_62_826_-0.970134359219493_9.20667633956153_29.2180354644608 chr16 5028971 5031708 + 29.2180354644608 NA intron (NM_001079814, intron 6 of 15) intron (NM_001079814, intron 6 of 15) -16786 NM_133185 66049 Mm.27792 NM_133185 ENSMUSG00000022540 Rogdi 0610011C19Rik|AU020118|C76152|Lzf rogdi homolog protein-coding unique_peak1_54_113_1.64840100422117_7.65709051627533_29.1995519936273 chr2 118540231 118541539 + 29.1995519936273 NA intron (NM_001311140, intron 3 of 3) intron (NM_001311140, intron 3 of 3) 6675 NM_001311140 171543 Mm.210125 NM_138313 ENSMUSG00000040093 Bmf AW260063|AW411872 BCL2 modifying factor protein-coding common_peak1_54_113_1.64840100422117_7.65709051627533_29.1995519936273 chr7 139943856 139944852 + 29.1995519936273 NA exon (NM_009482, exon 1 of 2) exon (NM_009482, exon 1 of 2) 498 NM_009482 22286 Mm.10205 NM_009482 ENSMUSG00000047751 Utf1 AI505934 undifferentiated embryonic cell transcription factor 1 protein-coding common_peak1_69_906_-0.916900714818633_9.36650838311921_29.1987078591742 chr3 65961622 65962714 + 29.1987078591742 NA Intergenic Intergenic -3943 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_135_613_0.821278349163062_9.67273401995171_29.170308771456 chr4 136469582 136470913 + 29.170308771456 NA intron (NM_024452, intron 1 of 4) CpG 486 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding common_peak2_53_722_-1.04903195892517_8.97333585748853_29.1095627449037 chr7 114275232 114277349 + 29.1095627449037 NA promoter-TSS (NM_011965) promoter-TSS (NM_011965) -174 NM_011965 26440 Mm.121265 NM_011965 ENSMUSG00000030751 Psma1 C2|HC2|Pros-30|alpha-type proteasome (prosome, macropain) subunit, alpha type 1 protein-coding common_peak1_79_243_1.2136215124406_8.53754809378319_29.1003670404481 chr1 155558033 155558949 + 29.1003670404481 NA 5' UTR (NM_026683, exon 1 of 4) 5' UTR (NM_026683, exon 1 of 4) 371 NM_026683 72482 Mm.288249 NM_026683 ENSMUSG00000033701 Acbd6 0610010G04Rik|2610100E10Rik acyl-Coenzyme A binding domain containing 6 protein-coding common_peak2_129_570_0.846179896156409_9.58043688344105_29.0994953056092 chr15 78247276 78249374 + 29.0994953056092 NA intron (NM_008677, intron 1 of 9) (TCC)n|Simple_repeat|Simple_repeat 3514 NM_008677 17972 Mm.2068 NM_008677 ENSMUSG00000071715 Ncf4 AI451400|p40phox neutrophil cytosolic factor 4 protein-coding common_peak1_62_825_-0.968388811467664_9.20580356568561_29.0963289604202 chr3 93548887 93550073 + 29.0963289604202 NA Intergenic MTC|LTR|ERVL-MaLR -5637 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak2_255_1632_0.529393432308897_10.9380057917161_29.0738698790857 chr4 62659973 62665028 + 29.0738698790857 NA intron (NM_134257, intron 10 of 15) intron (NM_134257, intron 10 of 15) -11474 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_31_474_-1.36891812890679_8.20732463876492_29.031542531852 chrX 50841381 50841956 + 29.031542531852 NA intron (NM_001313744, intron 1 of 11) CpG 297 NM_001313744 70415 Mm.46254 NM_133729 ENSMUSG00000031112 Stk26 2610018G03Rik|Mst4 serine/threonine kinase 26 protein-coding common_peak1_72_940_-0.895731886342908_9.43018496955708_29.0273960124269 chr7 72314304 72315725 + 29.0273960124269 NA Intergenic Intergenic -8419 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak1_43_609_-1.16625537856994_8.66953774316528_29.0193539753401 chrX 7648193 7648896 + 29.0193539753401 NA intron (NM_009305, intron 5 of 6) intron (NM_009305, intron 5 of 6) -8835 NM_001290624 54630 Mm.232232 NM_175097 ENSMUSG00000031145 Prickle3 Lmo6|Sfc16 prickle planar cell polarity protein 3 protein-coding common_peak1_34_507_-1.30723897224863_8.33506520064785_29.017208337408 chr5 140622055 140622950 + 29.017208337408 NA 3' UTR (NM_175274, exon 14 of 14) 3' UTR (NM_175274, exon 14 of 14) 15161 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak2_138_636_0.806835218536301_9.71856717152445_29.0157653522165 chr11 58103357 58104852 + 29.0157653522165 NA promoter-TSS (NM_026949) promoter-TSS (NM_026949) -49 NM_026949 69125 Mm.28910 NM_026949 ENSMUSG00000020515 Cnot8 1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059 CCR4-NOT transcription complex, subunit 8 protein-coding common_peak1_265_1727_0.515625121685249_11.0127000630061_29.0144095471447 chr5 134675902 134679072 + 29.0144095471447 NA intron (NM_010717, intron 2 of 15) ID_B1|SINE|B4 761 NM_001305875 16885 Mm.15409 NM_010717 ENSMUSG00000029674 Limk1 KIZ-1|LIMK-1|Limk LIM-domain containing, protein kinase protein-coding common_peak1_178_2221_-0.548098515966323_10.8435938434059_28.9938296173495 chr11 33938385 33940558 + 28.9938296173495 NA intron (NM_001190886, intron 1 of 7) intron (NM_001190886, intron 1 of 7) -23542 NM_031169 16533 Mm.6206 NM_031169 ENSMUSG00000020155 Kcnmb1 BKbeta1 potassium large conductance calcium-activated channel, subfamily M, beta member 1 protein-coding common_peak1_26_417_-1.48515156524129_7.96478334946024_28.9913964064012 chr11 82991275 82991813 + 28.9913964064012 NA intron (NM_172796, intron 1 of 4) intron (NM_172796, intron 1 of 4) 286 NM_172796 237886 Mm.270253 NM_172796 ENSMUSG00000069793 Slfn9 9830137M10Rik schlafen 9 protein-coding common_peak2_221_1321_0.582024017043359_10.6595184700294_28.9828628930216 chr6 83914098 83915464 + 28.9828628930216 NA intron (NM_008717, intron 1 of 26) CpG 428 NM_008717 18139 Mm.132392 NM_008717 ENSMUSG00000030016 Zfp638 AI323587|Np220|Zfml|Znf638|mNP220 zinc finger protein 638 protein-coding common_peak1_105_1326_-0.731598578740725_10.0081533659998_28.9796247977196 chr16 32650634 32652056 + 28.9796247977196 NA intron (NM_016788, intron 1 of 15) intron (NM_016788, intron 1 of 15) 6702 NM_016788 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding common_peak2_182_984_0.664674052856517_10.276316940772_28.9560604151508 chr1 105662708 105665117 + 28.9560604151508 NA promoter-TSS (NM_013784) promoter-TSS (NM_013784) 51 NM_173187 227446 Mm.337339 NM_029349 ENSMUSG00000026319 2310035C23Rik 6430401N10|Kiaa1468|mKIAA1468 RIKEN cDNA 2310035C23 gene protein-coding common_peak1_268_1757_0.510639766425603_11.0350392383562_28.955716420146 chr1 161033819 161036028 + 28.955716420146 NA promoter-TSS (NR_002840) promoter-TSS (NR_002840) -243 NR_002840 14455 Mm.270065 NR_002840 ENSMUSG00000053332 Gas5 Gas-5|Mir5117|Snhg2 growth arrest specific 5 ncRNA common_peak2_112_451_0.935340535757213_9.28784923029379_28.9496032166263 chr2 32734514 32737545 + 28.9496032166263 NA intron (NM_027529, intron 2 of 2) L2a|LINE|L2 4987 NM_027529 70730 Mm.401360 NM_027529 ENSMUSG00000009551 6330409D20Rik AA517851 RIKEN cDNA 6330409D20 gene protein-coding common_peak1_125_542_0.863413083333777_9.51651492947125_28.9465087670115 chr7 119793593 119794906 + 28.9465087670115 NA promoter-TSS (NM_001004187) promoter-TSS (NM_001004187) 62 NM_001004187 434234 Mm.38237 NM_028129 ENSMUSG00000030924 2610020H08Rik - RIKEN cDNA 2610020H08 gene protein-coding unique_peak2_15_294_-1.90831788112404_7.25041220368719_28.9444794668075 chr6 130197255 130198528 + 28.9444794668075 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -4779 NM_010651 16640 Mm.457996 NM_010651 ENSMUSG00000033024 Klra9 LY49I1|Ly49I killer cell lectin-like receptor subfamily A, member 9 protein-coding common_peak2_307_3907_-0.402268588822606_11.7310804575571_28.9440800059803 chr13 23760185 23764402 + 28.9440800059803 NA promoter-TSS (NM_013550) promoter-TSS (NM_013550) 93 NM_013550 360198 Mm.221301 NM_013550 ENSMUSG00000069265 Hist1h3a - histone cluster 1, H3a protein-coding common_peak2_148_712_0.767166735663732_9.86134163427575_28.9435159187231 chr8 19784039 19785678 + 28.9435159187231 NA intron (NM_001270553, intron 6 of 9) CpG 55282 NM_001039553 626415 Mm.425517 NM_001039553 ENSMUSG00000096265 4930467E23Rik ENSMUSG00000074453|OTTMUSG00000018948|TSAP RIKEN cDNA 4930467E23 gene protein-coding common_peak2_54_732_-1.0363783697479_8.99948020325986_28.9239987064965 chr3 20034296 20035785 + 28.9239987064965 NA intron (NM_080634, intron 1 of 16) CpG 270 NM_001146323 12807 Mm.291533 NM_080634 ENSMUSG00000027615 Hps3 coa Hermansky-Pudlak syndrome 3 protein-coding common_peak1_345_2528_0.431471521015668_11.5200870821711_28.9147122974056 chr11 44469549 44471772 + 28.9147122974056 NA promoter-TSS (NM_024475) promoter-TSS (NM_024475) -112 NM_024475 79560 Mm.338784 NM_024475 ENSMUSG00000041231 Ublcp1 4930527B16Rik|8430435I17Rik|BC002236 ubiquitin-like domain containing CTD phosphatase 1 protein-coding common_peak1_23_383_-1.57118703262906_7.79936898440662_28.9133708145826 chr14 70278255 70278871 + 28.9133708145826 NA intron (NM_001304992, intron 1 of 12) B3A|SINE|B2 10934 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak2_504_4293_0.336847304625003_12.2365301281713_28.9037273734805 chr2 13572174 13576464 + 28.9037273734805 NA promoter-TSS (NM_011701) promoter-TSS (NM_011701) 8 NM_011701 22352 Mm.268000 NM_011701 ENSMUSG00000026728 Vim - vimentin protein-coding common_peak2_356_2643_0.422700424885234_11.5798566739503_28.8946571440838 chr11 54954272 54957872 + 28.8946571440838 NA 5' UTR (NM_001199275, exon 2 of 19) 5' UTR (NM_001199275, exon 2 of 19) 6868 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak2_251_3159_-0.450875060739973_11.4002713126945_28.8902703386503 chr8 72161065 72164500 + 28.8902703386503 NA intron (NM_023126, intron 1 of 7) intron (NM_023126, intron 1 of 7) 1582 NM_023126 17274 Mm.162811 NM_023126 ENSMUSG00000003037 Rab8a AA409338|Mel RAB8A, member RAS oncogene family protein-coding common_peak2_219_1304_0.584681549301381_10.6421748661079_28.8881159426456 chr2 167588435 167590159 + 28.8881159426456 NA Intergenic Intergenic 42708 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak2_224_1349_0.575540532504759_10.6865139581906_28.8877836041771 chr8 90907368 90909729 + 28.8877836041771 NA intron (NM_177224, intron 2 of 39) CpG -23701 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_528_4577_0.32661584225159_12.3238096686815_28.8762561456251 chr1 36270859 36274284 + 28.8762561456251 NA intron (NM_153408, intron 1 of 3) intron (NM_153408, intron 1 of 3) 854 NM_153408 214854 Mm.389110 NM_153408 ENSMUSG00000047180 Neurl3 2010300P06Rik|Lincr neuralized E3 ubiquitin protein ligase 3 protein-coding common_peak1_188_1035_0.648935388418511_10.3412759818958_28.8686959832158 chr7 34312727 34314074 + 28.8686959832158 NA Intergenic CpG -27791 NM_172741 233103 Mm.491097 NM_172741 ENSMUSG00000066571 4931406P16Rik AA553327|mKIAA0355 RIKEN cDNA 4931406P16 gene protein-coding common_peak1_98_1242_-0.75815611723832_9.90053252243332_28.852362451085 chr6 128766360 128768043 + 28.852362451085 NA Intergenic L1M2|LINE|L1 21440 NM_008527 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak2_258_1663_0.522880042335789_10.961879739309_28.8435097390839 chr6 124722072 124725370 + 28.8435097390839 NA intron (NM_013545, intron 11 of 15) intron (NM_013545, intron 11 of 15) -5331 NR_029792 723944 NR_029792 ENSMUSG00000065462 Mir200c Mirn200c|mir-200c microRNA 200c ncRNA common_peak2_751_7379_0.260175231223686_12.9794927165596_28.8428565242245 chr10 75298519 75306969 + 28.8428565242245 NA intron (NM_153406, intron 13 of 15) intron (NM_153406, intron 13 of 15) -14133 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_25_406_-1.51346373962532_7.91215311445359_28.8159035019339 chr7 141266626 141267081 + 28.8159035019339 NA promoter-TSS (NM_001252601) promoter-TSS (NM_001252601) -429 NM_001252600 54123 Mm.3233 NM_016850 ENSMUSG00000025498 Irf7 - interferon regulatory factor 7 protein-coding common_peak2_361_2697_0.418144993714449_11.6067471298055_28.8086007214564 chr6 108548164 108553873 + 28.8086007214564 NA TTS (NM_010585) TTS (NM_010585) 61275 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_76_984_-0.867258373570673_9.5103507275584_28.8014608349562 chr10 86021698 86022674 + 28.8014608349562 NA promoter-TSS (NM_001310745) promoter-TSS (NM_001310745) 32 NM_001310745 69754 Mm.44236 NM_153195 ENSMUSG00000001786 Fbxo7 2410015K21Rik|A230052G17Rik|AI117679|AW260462|C85118 F-box protein 7 protein-coding common_peak2_110_439_0.942558453840036_9.25263894044468_28.7813068886868 chr10 45066369 45067947 + 28.7813068886868 NA promoter-TSS (NM_011156) promoter-TSS (NM_011156) -56 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak2_52_708_-1.0539000517964_8.94269179134131_28.7807980129366 chr11 69124824 69126562 + 28.7807980129366 NA promoter-TSS (NM_011786) promoter-TSS (NM_011786) -684 NM_011786 23801 Mm.41989 NM_011786 ENSMUSG00000020892 Aloxe3 e-LOX-3|eLOX-3 arachidonate lipoxygenase 3 protein-coding common_peak2_185_2306_-0.534373256609037_10.9046156603785_28.7736025654883 chr4 135156489 135161712 + 28.7736025654883 NA intron (NM_019732, intron 3 of 5) intron (NM_019732, intron 3 of 5) 38455 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_477_3982_0.348077060914747_12.1336782948216_28.766480830241 chr10 22297693 22304103 + 28.766480830241 NA intron (NM_009018, intron 5 of 5) MTC-int|LTR|ERVL-MaLR -5822 NR_015465 606736 Mm.387042 NR_015465 ENSMUSG00000097352 C920009B18Rik - RIKEN cDNA C920009B18 gene ncRNA common_peak1_152_745_0.748773473025503_9.91741855676799_28.7567498476763 chr9 110407201 110408827 + 28.7567498476763 NA intron (NM_001081043, intron 1 of 24) CpG 196 NM_001081043 104831 Mm.335477 NM_001081043 ENSMUSG00000036057 Ptpn23 AI462446|PTP-TD14 protein tyrosine phosphatase, non-receptor type 23 protein-coding common_peak1_524_4532_0.327435371669152_12.3099681317206_28.75539777923 chr13 113097410 113102896 + 28.75539777923 NA intron (NM_010370, intron 1 of 4) intron (NM_010370, intron 1 of 4) 828 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak2_109_432_0.949680114845547_9.2330632721495_28.7452775646866 chr10 94035138 94036790 + 28.7452775646866 NA promoter-TSS (NM_001304720) promoter-TSS (NM_001304720) -37 NM_053072 13998 Mm.269596 NM_053072 ENSMUSG00000020021 Fgd6 AA123052|Etohd4|ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding common_peak1_46_641_-1.12329839969629_8.76478028727416_28.7444031534041 chr12 75735099 75735841 + 28.7444031534041 NA exon (NM_030750, exon 1 of 3) exon (NM_030750, exon 1 of 3) 259 NM_030750 81535 Mm.280199 NM_030750 ENSMUSG00000021054 Sgpp1 AI463453|SPP|SPP1|Spph1 sphingosine-1-phosphate phosphatase 1 protein-coding common_peak1_30_461_-1.38506683668175_8.15921562307518_28.73996895585 chr19 44135358 44135959 + 28.73996895585 NA intron (NM_001081077, intron 1 of 13) intron (NM_001081077, intron 1 of 13) 218 NM_001081077 72502 Mm.276109 NM_001081077 ENSMUSG00000025200 Cwf19l1 2610528C06Rik|AI854304|AV336991 CWF19-like 1, cell cycle control (S. pombe) protein-coding common_peak1_83_1065_-0.827292456587966_9.64434549446519_28.7373476057177 chr6 120038826 120039860 + 28.7373476057177 NA promoter-TSS (NM_001185020) promoter-TSS (NM_001185020) -688 NM_001185021 232341 Mm.333349 NM_198703 ENSMUSG00000045962 Wnk1 6430573H23Rik|EG406236|Hsn2|Prkwnk1|mKIAA0344 WNK lysine deficient protein kinase 1 protein-coding common_peak1_502_4273_0.336560247265844_12.2296513162927_28.7353349895777 chr2 13572481 13576653 + 28.7353349895777 NA exon (NM_011701, exon 1 of 9) exon (NM_011701, exon 1 of 9) 256 NM_011701 22352 Mm.268000 NM_011701 ENSMUSG00000026728 Vim - vimentin protein-coding common_peak1_69_189_1.33820241737894_8.23895681702042_28.7270992372188-2 chr8 84183288 84184334 + 28.7270992372188 NA Intergenic CpG -4850 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak1_69_189_1.33820241737894_8.23895681702042_28.7270992372188 chr13 104108735 104109596 + 28.7270992372188 NA promoter-TSS (NM_144838) promoter-TSS (NM_144838) 449 NM_029447 75805 Mm.127692 NM_029447 ENSMUSG00000021710 Nln 4930472G13Rik|C79345 neurolysin (metallopeptidase M3 family) protein-coding common_peak2_42_595_-1.17344135020821_8.63244784535806_28.7266998421091 chr17 25843753 25845450 + 28.7266998421091 NA TTS (NM_001163766) TTS (NM_001163766) 250 NM_145999 214952 Mm.40907 NM_145999 ENSMUSG00000025733 Rhot2 Arht2|Miro2 ras homolog family member T2 protein-coding common_peak1_37_539_-1.24983908246759_8.45189605581704_28.7149831541905 chr4 46580854 46581593 + 28.7149831541905 NA intron (NM_001164804, intron 1 of 11) MMTV-int|LTR|ERVK -14783 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak2_193_1079_0.635135077498933_10.3943831358003_28.7022711715806 chr14 57729159 57731598 + 28.7022711715806 NA intron (NM_153382, intron 1 of 1) intron (NM_153382, intron 1 of 1) 4040 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_53_110_1.65440401167584_7.62161787218803_28.701044719987 chr10 56106852 56107450 + 28.701044719987 NA intron (NM_001163833, intron 1 of 1) intron (NM_001163833, intron 1 of 1) 234 NM_001163833 73390 Mm.181475 NM_133751 ENSMUSG00000047669 Msl3l2 1700060H10Rik male-specific lethal 3-like 2 (Drosophila) protein-coding common_peak2_259_1674_0.520193762473111_10.9700422614691_28.6877764479671 chr11 101118648 101120945 + 28.6877764479671 NA promoter-TSS (NM_026501) promoter-TSS (NM_026501) 28 NM_026501 67998 Mm.33881 NM_026501 ENSMUSG00000017802 Fam134c 1300010M03Rik|4933404C01Rik|AI551748 family with sequence similarity 134, member C protein-coding common_peak2_103_393_0.986594047557269_9.11534884323501_28.6766288866788 chr17 87117871 87120157 + 28.6766288866788 NA intron (NM_019654, intron 1 of 2) URR1B|DNA|hAT-Charlie 11335 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding common_peak2_450_3675_0.360903626904241_12.0243728647412_28.6720051682859 chr17 25271570 25275038 + 28.6720051682859 NA promoter-TSS (NR_027452) promoter-TSS (NR_027452) 127 NM_001177610 22196 Mm.240044 NM_011665 ENSMUSG00000015120 Ube2i 5830467E05Rik|F830028O17Rik|UBC9|Ubce2i|Ubce9 ubiquitin-conjugating enzyme E2I protein-coding common_peak2_66_867_-0.931007532294755_9.2960474662971_28.6524435465081 chr7 27489501 27491785 + 28.6524435465081 NA TTS (NM_018820) TTS (NM_018820) 3690 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding common_peak2_90_1146_-0.791304633295777_9.76799735936794_28.6469658403192 chr2 129296693 129298297 + 28.6469658403192 NA promoter-TSS (NM_181589) promoter-TSS (NM_181589) 125 NR_040371 100503468 Mm.446943 NR_040371 ENSMUSG00000085498 Gm14023 OTTMUSG00000015408 predicted gene 14023 ncRNA common_peak1_25_405_-1.50991467254424_7.91037858091305_28.6460593295358 chr10 61334162 61334627 + 28.6460593295358 NA intron (NM_013753, intron 18 of 19) B1_Mur2|SINE|Alu 36558 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak2_600_5455_0.299305636900161_12.5632807474743_28.6363615270908 chr17 4993291 4997726 + 28.6363615270908 NA exon (NM_001085355, exon 1 of 20) exon (NM_001085355, exon 1 of 20) 434 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_22_371_-1.60069800701452_7.73880980760077_28.6047842596169 chr8 123033397 123033792 + 28.6047842596169 NA intron (NR_037865, intron 1 of 13) intron (NR_037865, intron 1 of 13) 8690 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_50_685_-1.07439398904536_8.88486777165014_28.5959164039065 chr13 24602967 24603887 + 28.5959164039065 NA intron (NR_024599, intron 1 of 1) intron (NR_024599, intron 1 of 1) 1340 NR_024599 76024 Mm.440710 NR_024599 Gm11346 5830431A10Rik|AI447617|Gm11347|OTTMUSG00000000601|OTTMUSG00000000602 X-linked lymphocyte-regulated 5 pseudogene pseudo common_peak2_175_2177_-0.549153562463887_10.814211457485_28.5957928156438 chr15 103238582 103241968 + 28.5957928156438 NA promoter-TSS (NR_104427) promoter-TSS (NR_104427) -122 NR_104427 15382 Mm.237064 NM_010447 ENSMUSG00000046434 Hnrnpa1 HDP-1|Hdp|Hnrpa1|hnRNP A1|hnrnp-A1 heterogeneous nuclear ribonucleoprotein A1 protein-coding common_peak2_214_1263_0.590052008955169_10.5988067526547_28.5888994030263 chr15 82898517 82900297 + 28.5888994030263 NA promoter-TSS (NR_027799) promoter-TSS (NR_027799) 327 NR_045068 100504637 Mm.440928 NR_045068 ENSMUSG00000100199 Gm20324 - predicted gene, 20324 ncRNA common_peak1_277_1848_0.496067582574762_11.1005633006916_28.5863807980936 chr4 124849877 124851761 + 28.5863807980936 NA promoter-TSS (NM_153566) promoter-TSS (NM_153566) 60 NM_153566 230734 Mm.258568 NM_153566 ENSMUSG00000028889 Yrdc AV303379|BC023823|IRIP|ITIP yrdC domain containing (E.coli) protein-coding common_peak1_42_594_-1.17101868794136_8.63123651422463_28.585258313635 chr5 145204029 145205038 + 28.585258313635 NA promoter-TSS (NM_001167944) promoter-TSS (NM_001167944) -26 NM_016683 22757 Mm.332842 NM_016683 ENSMUSG00000055991 Zkscan5 AI132486|AI326970|Zfp95|hKraba1 zinc finger with KRAB and SCAN domains 5 protein-coding common_peak1_30_460_-1.38194073569503_8.15765257258182_28.5801895555657 chr13 55016774 55017402 + 28.5801895555657 NA intron (NM_001206392, intron 1 of 17) intron (NM_001206392, intron 1 of 17) 3731 NM_001206390 212032 Mm.267479 NM_001033245 ENSMUSG00000025877 Hk3 HK III|HK-III hexokinase 3 protein-coding unique_peak1_49_93_1.7580386516451_7.43360817750019_28.5761077930614 chr19 34598690 34599540 + 28.5761077930614 NA intron (NM_001101605, intron 1 of 1) intron (NM_001101605, intron 1 of 1) 312 NM_001110517 667373 Mm.371956 NM_001101605 ENSMUSG00000079339 Ifit1bl1 Gm14446|Ifit1c|OTTMUSG00000016644 interferon induced protein with tetratricpeptide repeats 1B like 1 protein-coding common_peak1_85_1086_-0.813796743587003_9.67923785323381_28.5740283426668 chr11 97103094 97104249 + 28.5740283426668 NA intron (NM_019507, intron 1 of 5) intron (NM_019507, intron 1 of 5) 11660 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding common_peak2_509_4358_0.332607186838136_12.2560850817731_28.5715948829132 chr15 80254063 80257586 + 28.5715948829132 NA intron (NM_001287180, intron 2 of 3) CpG 640 NM_009716 11911 Mm.641 NM_009716 ENSMUSG00000042406 Atf4 Atf-4|C/ATF|CREB2|TAXREB67 activating transcription factor 4 protein-coding common_peak2_373_2828_0.407453523892128_11.6698032233423_28.5699162387056 chr1 52498308 52502454 + 28.5699162387056 NA promoter-TSS (NM_008667) promoter-TSS (NM_008667) 67 NM_008667 17936 Mm.25903 NM_008667 ENSMUSG00000002881 Nab1 - Ngfi-A binding protein 1 protein-coding common_peak1_144_685_0.774704135218077_9.80941683378185_28.5637935955702 chr9 50658889 50660393 + 28.5637935955702 NA 5' UTR (NM_145614, exon 1 of 14) 5' UTR (NM_145614, exon 1 of 14) 139 NM_145614 235339 Mm.285076 NM_145614 ENSMUSG00000000168 Dlat 6332404G05Rik|DLTA|PDC-E2 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) protein-coding common_peak2_1021_11111_0.212636562856062_13.5461491654094_28.5585898627081 chr3 103855384 103870779 + 28.5585898627081 NA intron (NR_104070, intron 3 of 22) intron (NR_104070, intron 3 of 22) 2804 NM_008979 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding common_peak1_122_1525_-0.66996146561582_10.2405585140266_28.5535418206527 chr11 49977349 49978979 + 28.5535418206527 NA intron (NM_029004, intron 12 of 13) Tigger5b|DNA|TcMar-Tigger -47167 NM_021540 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak2_54_729_-1.03046163538146_8.99652183607665_28.5393363580329 chr6 115852133 115854046 + 28.5393363580329 NA promoter-TSS (NM_031177) promoter-TSS (NM_031177) 252 NM_010774 17193 Mm.259308 NM_010774 ENSMUSG00000030322 Mbd4 Med1 methyl-CpG binding domain protein 4 protein-coding common_peak2_188_2340_-0.527165543006946_10.9293264476085_28.5389715897182 chr5 129785683 129788204 + 28.5389715897182 NA promoter-TSS (NM_009838) promoter-TSS (NM_009838) 310 NM_133900 100678 Mm.271784 NM_133900 ENSMUSG00000029446 Psph AI480570|PSP|PSPase phosphoserine phosphatase protein-coding common_peak1_57_763_-1.00215320233682_9.07635222686734_28.5386112484286 chr19 11434895 11435746 + 28.5386112484286 NA Intergenic L1VL4|LINE|L1 -8238 NM_021718 60361 Mm.33957 NM_021718 ENSMUSG00000056290 Ms4a4b AI463180|Chandra|Ly116 membrane-spanning 4-domains, subfamily A, member 4B protein-coding common_peak1_82_1051_-0.829413120123954_9.62421242923033_28.5197010734301 chr11 55022314 55023198 + 28.5197010734301 NA intron (NM_013472, intron 1 of 25) intron (NM_013472, intron 1 of 25) 10715 NM_001110211 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak1_419_3330_0.377065214375181_11.8902722458619_28.5175026812036 chr14 54148953 54154676 + 28.5175026812036 NA Intergenic Intergenic 102115 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_99_1250_-0.749626259656726_9.91405294433746_28.4906646284267 chr2 29053243 29055706 + 28.4906646284267 NA intron (NM_001166705, intron 1 of 5) intron (NM_001166705, intron 1 of 5) 592 NM_001166705 329375 Mm.425079 NM_001085514 ENSMUSG00000079502 Cfap77 1700101E01Rik|Gm823 cilia and flagella associated protein 77 protein-coding common_peak2_115_475_0.907070173577338_9.34835285009661_28.4841002018287 chr17 25918823 25919781 + 28.4841002018287 NA intron (NM_139154, intron 2 of 6) CpG 412 NM_139154 224624 Mm.328872 NM_139154 ENSMUSG00000025730 Rab40c RAR3 Rab40C, member RAS oncogene family protein-coding common_peak2_53_717_-1.0390201557971_8.9683299559245_28.4631337959047 chr9 21367854 21369251 + 28.4631337959047 NA promoter-TSS (NM_001277322) promoter-TSS (NM_001277322) 20 NM_001277322 16201 Mm.440026 NM_010561 ENSMUSG00000032178 Ilf3 MBII-26|MPHOSPH4|NF90|NFAR interleukin enhancer binding factor 3 protein-coding common_peak2_78_240_1.20920975488335_8.51749421367164_28.4516961097077 chr13 41466354 41468173 + 28.4516961097077 NA intron (NM_001111324, intron 1 of 7) intron (NM_001111324, intron 1 of 7) 20097 NM_001111324 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_223_2787_-0.478613162291429_11.2057082647227_28.4467747756624 chr11 46306852 46309710 + 28.4467747756624 NA intron (NM_001252459, intron 1 of 30) MTEb|LTR|ERVL-MaLR 4077 NM_001252460 76884 Mm.154358 NM_133769 ENSMUSG00000020340 Cyfip2 1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168 cytoplasmic FMR1 interacting protein 2 protein-coding common_peak1_47_649_-1.10390812863736_8.79234184359713_28.4397892611287 chr2 166125404 166126325 + 28.4397892611287 NA intron (NM_001252579, intron 2 of 20) LTR33|LTR|ERVL 29421 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak1_47_649_-1.10390812863736_8.79234184359713_28.4397892611287-2 chr3 89772715 89773369 + 28.4397892611287 NA promoter-TSS (NM_027315) promoter-TSS (NM_027315) 358 NR_130957 74034 Mm.386816 NR_130957 ENSMUSG00000042579 4632404H12Rik - RIKEN cDNA 4632404H12 gene ncRNA common_peak2_229_1399_0.561967590325855_10.7321949069953_28.4329593918994 chr15 78243186 78246642 + 28.4329593918994 NA 5' UTR (NM_008677, exon 1 of 10) 5' UTR (NM_008677, exon 1 of 10) 103 NM_008677 17972 Mm.2068 NM_008677 ENSMUSG00000071715 Ncf4 AI451400|p40phox neutrophil cytosolic factor 4 protein-coding common_peak2_1081_11983_0.204602236178513_13.651123026548_28.4260796396533 chr15 79890694 79902577 + 28.4260796396533 NA intron (NM_001160415, intron 2 of 8) intron (NM_001160415, intron 2 of 8) -3497 NR_030675 109361 Mm.394656 NR_030675 D730005E14Rik - RIKEN cDNA D730005E14 gene ncRNA common_peak1_125_1560_-0.66003335083977_10.278238146558_28.4235621389036 chr8 25068366 25069642 + 28.4235621389036 NA intron (NM_031257, intron 3 of 11) L1_Mus3|LINE|L1 -30042 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding common_peak1_140_1742_-0.620091250546382_10.4573112288525_28.4235560623991 chr11 34778551 34780860 + 28.4235560623991 NA intron (NM_033374, intron 1 of 51) MLT1B|LTR|ERVL-MaLR 4200 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding common_peak1_116_482_0.901198586925371_9.36647867229846_28.4191645614685 chr4 19574619 19575971 + 28.4191645614685 NA exon (NM_025476, exon 1 of 10) exon (NM_025476, exon 1 of 10) 229 NM_025476 66302 Mm.440686 NM_025476 ENSMUSG00000028229 Rmdn1 Fam82b|RMD-1 regulator of microtubule dynamics 1 protein-coding common_peak1_171_2125_-0.554974088904443_10.7764388370789_28.4161744342326 chr12 55229658 55231183 + 28.4161744342326 NA promoter-TSS (NM_001100110) promoter-TSS (NM_001100110) -58 NM_001100110 100101806 Mm.471968 NM_001100110 ENSMUSG00000079108 Srp54c E330029E12Rik signal recognition particle 54C protein-coding common_peak1_224_1354_0.570207088201718_10.6891806803421_28.4130556341422 chr15 78243758 78246614 + 28.4130556341422 NA intron (NM_008677, intron 1 of 9) intron (NM_008677, intron 1 of 9) 375 NM_008677 17972 Mm.2068 NM_008677 ENSMUSG00000071715 Ncf4 AI451400|p40phox neutrophil cytosolic factor 4 protein-coding common_peak1_27_425_-1.44814487020791_8.01063718512188_28.4058571723335 chr15 38519495 38520092 + 28.4058571723335 NA promoter-TSS (NM_001301688) promoter-TSS (NM_001301688) -527 NM_018745 54375 Mm.250214 NM_018745 ENSMUSG00000037458 Azin1 1700085L02Rik|AZI|Oazi|Oazin antizyme inhibitor 1 protein-coding unique_peak1_46_81_1.84557908280793_7.28034154602205_28.4024599152492 chr14 25477405 25478312 + 28.4024599152492 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 18673 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_87_1108_-0.802021285095046_9.71403300761419_28.38906034045 chr5 115516911 115518185 + 28.38906034045 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 10872 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak1_391_3025_0.393516898253013_11.7599547213432_28.3840946290533 chr19 56755354 56758571 + 28.3840946290533 NA Intergenic Intergenic 34590 NM_007419 11554 Mm.46797 NM_007419 ENSMUSG00000035283 Adrb1 Adrb-1|beta-AR adrenergic receptor, beta 1 protein-coding common_peak1_116_1451_-0.686747772234606_10.1604518518784_28.3739274578205 chrX 12157672 12159596 + 28.3739274578205 NA intron (NR_045434, intron 1 of 3) CpG 1712 NR_045434 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak2_233_1436_0.554845930490165_10.7662673117024_28.3652253237084 chr11 106701208 106706047 + 28.3652253237084 NA intron (NM_001305158, intron 2 of 14) ID|SINE|ID 11654 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak1_266_1745_0.507315041288031_11.0234953642735_28.3475486220201 chr5 96996605 96998766 + 28.3475486220201 NA promoter-TSS (NM_080708) promoter-TSS (NM_080708) -4 NM_080708 140780 Mm.281490 NM_080708 ENSMUSG00000034663 Bmp2k 4933417M22Rik|AA673486|AV128808|BIKE BMP2 inducible kinase protein-coding common_peak1_199_1134_0.617375543517175_10.4571643539369_28.3403159636515 chr6 125493112 125494860 + 28.3403159636515 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 769 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak2_158_1962_-0.578968175869774_10.6493603695313_28.3184559095419 chr8 57405416 57409797 + 28.3184559095419 NA Intergenic Intergenic -48317 NM_009136 20284 Mm.12886 NM_009136 ENSMUSG00000031610 Scrg1 AW124307 scrapie responsive gene 1 protein-coding common_peak1_93_1178_-0.773604604367387_9.81654570079607_28.3080899579304 chr4 62407503 62408659 + 28.3080899579304 NA promoter-TSS (NM_027297) promoter-TSS (NM_027297) 542 NM_139291 66440 Mm.109930 NM_139291 ENSMUSG00000066149 Cdc26 2010012C09Rik cell division cycle 26 protein-coding common_peak1_25_403_-1.50279023811086_7.90681636369636_28.3072116637819 chr1 155040838 155041402 + 28.3072116637819 NA Intergenic Intergenic 58516 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding unique_peak1_45_77_1.87967089641762_7.22523766707106_28.3069349700338 chr7 66219489 66220349 + 28.3069349700338 NA Intergenic Intergenic 110404 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_64_842_-0.942474300609186_9.24815167063749_28.3047246672769 chr2 122376882 122378612 + 28.3047246672769 NA Intergenic Intergenic -8829 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding common_peak1_81_1037_-0.831535152106099_9.60382315230483_28.3026372121918 chr13 23561537 23562453 + 28.3026372121918 NA TTS (NM_178205) TTS (NM_178205) 370 NM_178205 319151 Mm.261658 NM_178205 ENSMUSG00000069273 Hist1h3e H3-f|H3.1 histone cluster 1, H3e protein-coding unique_peak1_23_8_3.84385046664978_5.0918502347672_28.3022142257403 chr17 71255598 71256113 + 28.3022142257403 NA intron (NM_145158, intron 6 of 7) intron (NM_145158, intron 6 of 7) 51201 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak2_88_1119_-0.796264648180779_9.73115069285458_28.3013285881057 chr11 77347841 77349830 + 28.3013285881057 NA intron (NM_001291190, intron 1 of 13) intron (NM_001291190, intron 1 of 13) 555 NM_001291190 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot homolog 2 (Drosophila) protein-coding common_peak2_279_1871_0.490917928499199_11.115823683833_28.2945592293279 chr8 11007028 11010218 + 28.2945592293279 NA promoter-TSS (NM_001081212) promoter-TSS (NM_001081212) -193 NM_001081212 384783 Mm.407207 NM_001081212 ENSMUSG00000038894 Irs2 Irs-2 insulin receptor substrate 2 protein-coding common_peak1_60_796_-0.9739164629435_9.15147768251872_28.2822861998964 chr17 25833107 25833972 + 28.2822861998964 NA promoter-TSS (NM_019719) promoter-TSS (NM_019719) -178 NM_019719 56424 Mm.277599 NM_019719 ENSMUSG00000039615 Stub1 0610033N24Rik|2210017D18Rik|2310040B03Rik|AW046544|Chip STIP1 homology and U-Box containing protein 1 protein-coding common_peak1_142_1765_-0.614079281066038_10.4792299871154_28.2791801093399 chr9 21126515 21127528 + 28.2791801093399 NA intron (NM_001205312, intron 3 of 24) intron (NM_001205312, intron 3 of 24) 4254 NM_018793 54721 Mm.20249 NM_018793 ENSMUSG00000032175 Tyk2 JTK1 tyrosine kinase 2 protein-coding common_peak1_107_1343_-0.716885233566453_10.0338748059955_28.27618680807 chr14 62761297 62762408 + 28.27618680807 NA promoter-TSS (NM_008715) promoter-TSS (NM_008715) -740 NM_008715 18130 Mm.319684 NM_008715 ENSMUSG00000035161 Ints6 2900075H24Rik|AI480962|DICE1|Ddx26|HDB|Notch2l integrator complex subunit 6 protein-coding common_peak1_35_513_-1.27432687613486_8.36846111112645_28.2761329073368 chr10 93451902 93452539 + 28.2761329073368 NA Intergenic Intergenic -1176 NM_001313897 16993 Mm.271071 NM_008517 ENSMUSG00000015889 Lta4h - leukotriene A4 hydrolase protein-coding common_peak1_51_694_-1.05883561178358_8.91145136171908_28.2657360792523 chr17 46782651 46783237 + 28.2657360792523 NA promoter-TSS (NM_025433) promoter-TSS (NM_025433) -288 NM_025433 66229 Mm.218533 NM_025433 ENSMUSG00000063888 Rpl7l1 1500016H10Rik ribosomal protein L7-like 1 protein-coding common_peak1_30_458_-1.3756681386795_8.15451627407406_28.2614187536997 chr5 74531816 74532431 + 28.2614187536997 NA promoter-TSS (NM_178672) promoter-TSS (NM_178672) -381 NM_001114660 212986 Mm.134147 NM_178672 ENSMUSG00000062110 Scfd2 E430013M20Rik|STXBP1L1 Sec1 family domain containing 2 protein-coding common_peak2_171_900_0.683568496813125_10.1571675442201_28.2404315557703 chr1 74294707 74297152 + 28.2404315557703 NA intron (NM_027154, intron 1 of 11) intron (NM_027154, intron 1 of 11) 8407 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding common_peak1_79_247_1.19016253961661_8.54927758019518_28.2250504102025 chr16 57548882 57550159 + 28.2250504102025 NA intron (NM_001177871, intron 1 of 1) intron (NM_001177871, intron 1 of 1) 278 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak2_380_2909_0.399541772531682_11.7065743240615_28.2218594701156 chr13 44506128 44510128 + 28.2218594701156 NA Intergenic L2|LINE|L2 68401 NR_045489 69491 Mm.392410 NR_045489 ENSMUSG00000098144 1700029N11Rik - RIKEN cDNA 1700029N11 gene ncRNA common_peak2_630_5837_0.287875268096117_12.6551961295503_28.2209177035356 chr17 35391890 35396417 + 28.2209177035356 NA promoter-TSS (NR_051981) promoter-TSS (NR_051981) 54 NR_051981 15016 Mm.439648 NR_051981 ENSMUSG00000055413 H2-Q5 H-2Q5|Qa-5|Qa5|Qat-5 histocompatibility 2, Q region locus 5 pseudo common_peak2_173_917_0.677059798438401_10.180880242633_28.1943057031078 chr4 135971657 135974153 + 28.1943057031078 NA promoter-TSS (NM_011942) promoter-TSS (NM_011942) -311 NM_011942 26394 Mm.34302 NM_011942 ENSMUSG00000028670 Lypla2 LysoII lysophospholipase 2 protein-coding common_peak2_653_6128_0.28105307341489_12.7219625261618_28.1743994095003 chr1 86524685 86530250 + 28.1743994095003 NA intron (NM_008972, intron 1 of 4) CpG-365 731 NM_008972 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding unique_peak1_33_34_2.50086555521556_6.37971579455275_28.1567673462387 chr6 50360976 50361594 + 28.1567673462387 NA intron (NM_001163645, intron 3 of 21) PB1D10|SINE|Alu 21552 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_359_2686_0.414234965110532_11.5988980885684_28.1511180623644 chr7 27165233 27168159 + 28.1511180623644 NA 5' UTR (NM_053208, exon 1 of 6) 5' UTR (NM_053208, exon 1 of 6) 106 NM_053208 112406 Mm.29978 NM_053208 ENSMUSG00000058709 Egln2 0610011A13Rik|C85656|Hif-p4h-1|Ier4|Phd1|SM-20 egl-9 family hypoxia-inducible factor 2 protein-coding common_peak2_405_3182_0.382640293328473_11.8274915883002_28.1334678777796 chr9 45264083 45270133 + 28.1334678777796 NA promoter-TSS (NR_106054) promoter-TSS (NR_106054) -401 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak1_52_703_-1.04368985319418_8.9375866920402_28.1318615866806 chr2 65189191 65190085 + 28.1318615866806 NA intron (NM_177025, intron 1 of 13) intron (NM_177025, intron 1 of 13) 48988 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak2_220_1321_0.574034714541312_10.6555238187783_28.1196130984332-2 chr5 115506499 115510440 + 28.1196130984332 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 1793 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak2_220_1321_0.574034714541312_10.6555238187783_28.1196130984332 chr1 156614272 156617752 + 28.1196130984332 NA intron (NM_001136104, intron 1 of 12) intron (NM_001136104, intron 1 of 12) 57225 NM_001136104 11352 Mm.329515 NM_009595 ENSMUSG00000026596 Abl2 AA536808|Abll|Arg v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) protein-coding common_peak1_55_737_-1.01429994485611_9.02032703363234_28.1124021397312 chr1 138159147 138160115 + 28.1124021397312 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 15495 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_99_370_1.00396443788829_9.03725759556495_28.1032445230518 chr14 57907698 57909263 + 28.1032445230518 NA Intergenic B1_Mur3|SINE|Alu -18218 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|ENSMUSG00000055956|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak2_436_3527_0.364386143553137_11.9668279173341_28.0993010878528 chr3 95279226 95284089 + 28.0993010878528 NA 5' UTR (NM_173347, exon 1 of 8) 5' UTR (NM_173347, exon 1 of 8) 419 NM_173347 229589 Mm.14155 NM_173347 ENSMUSG00000015711 Prune1 9230112O05Rik|C130058A12|DRES-17|HTCD37|PRUNEM1|Prune|Prune-M1 prune exopolyphosphatase protein-coding common_peak2_419_3337_0.374036613686933_11.8917865462061_28.0956124708055 chr6 128824268 128829074 + 28.0956124708055 NA promoter-TSS (NM_030599) promoter-TSS (NM_030599) -356 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak1_627_5803_0.287868452711619_12.6467660304226_28.0794716698224 chr17 35391924 35396105 + 28.0794716698224 NA promoter-TSS (NR_051981) promoter-TSS (NR_051981) -85 NR_051981 15016 Mm.439648 NR_051981 ENSMUSG00000055413 H2-Q5 H-2Q5|Qa-5|Qa5|Qat-5 histocompatibility 2, Q region locus 5 pseudo common_peak2_98_364_1.00970181004678_9.01660355879077_28.0386291321029 chr11 94563876 94565334 + 28.0386291321029 NA promoter-TSS (NM_007689) promoter-TSS (NM_007689) -469 NM_007689 12643 Mm.440523 NM_007689 ENSMUSG00000039084 Chad SLRR4A chondroadherin protein-coding unique_peak1_43_70_1.93666293437562_7.11807858669249_27.9759649398475 chr12 98920121 98921147 + 27.9759649398475 NA promoter-TSS (NM_029553) promoter-TSS (NM_029553) 22 NM_198311 76260 Mm.282660 NM_029553 ENSMUSG00000021013 Ttc8 0610012F22Rik|AV001447|BBS8 tetratricopeptide repeat domain 8 protein-coding common_peak1_193_1086_0.625814449522457_10.3990434497885_27.9646592058992 chr4 123749385 123750603 + 27.9646592058992 NA exon (NM_023423, exon 1 of 5) exon (NM_023423, exon 1 of 5) 305 NM_023423 68050 Mm.27903 NM_023423 ENSMUSG00000023075 Akirin1 6330407G11Rik akirin 1 protein-coding common_peak1_387_2988_0.393115804058025_11.7420050837071_27.9643643488592 chr15 78454638 78457372 + 27.9643643488592 NA intron (NM_027902, intron 6 of 17) intron (NM_027902, intron 6 of 17) 12629 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak1_71_203_1.28548464227388_8.31516766310844_27.9642198473195 chr7 83649652 83650920 + 27.9642198473195 NA intron (NM_010551, intron 15 of 18) intron (NM_010551, intron 15 of 18) 18269 NM_023377 170460 Mm.357953 NM_023377 ENSMUSG00000046027 Stard5 2310058G22Rik|AI607880|D7Ertd152e StAR-related lipid transfer (START) domain containing 5 protein-coding common_peak2_120_513_0.870942295441569_9.44109569691466_27.9560668064822 chr4 132048301 132050028 + 27.9560668064822 NA promoter-TSS (NM_001128606) promoter-TSS (NM_001128606) -86 NM_001128606 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding common_peak1_56_747_-1.00239574033746_9.0456965897189_27.9483235694635 chr9 64178836 64179866 + 27.9483235694635 NA promoter-TSS (NM_183316) promoter-TSS (NM_183316) 54 NM_183316 330959 Mm.24082 NM_183316 ENSMUSG00000032398 Snapc5 2010103A03Rik small nuclear RNA activating complex, polypeptide 5 protein-coding common_peak2_45_78_1.86129236710276_7.23442693172848_27.9355662589171 chr11 6526129 6526979 + 27.9355662589171 NA intron (NR_045893, intron 2 of 3) intron (NR_045893, intron 2 of 3) 2206 NR_045893 100041286 Mm.459507 NR_045893 ENSMUSG00000085156 Snhg15 Gm11974|OTTMUSG00000005115 small nucleolar RNA host gene 15 ncRNA common_peak2_84_278_1.1275205360233_8.68788157984084_27.9206051556747 chr9 63690115 63691823 + 27.9206051556747 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 67025 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_234_1450_0.548404870237592_10.7770342391855_27.9177730123605 chr16 49798101 49802250 + 27.9177730123605 NA Intergenic Intergenic -55479 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_127_1578_-0.648705259176001_10.3004428262722_27.9165747503265 chr11 96987346 96989531 + 27.9165747503265 NA Intergenic Intergenic -10750 NM_001080964 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak2_93_1174_-0.768701642839988_9.81409422003237_27.9059877507625 chr12 85823894 85825765 + 27.9059877507625 NA promoter-TSS (NM_001081423) promoter-TSS (NM_001081423) -121 NM_001081423 320244 Mm.132172 NM_177114 ENSMUSG00000012609 Ttll5 1700048H13Rik|2310009M18Rik|4930556H18Rik|AI428864|D630041K24Rik|R75373|Stamp|mKIAA0998 tubulin tyrosine ligase-like family, member 5 protein-coding common_peak1_54_724_-1.02054616651638_8.99156410164411_27.9021552236863 chr17 83654074 83654726 + 27.9021552236863 NA Intergenic Intergenic -22505 NM_153512 225030 Mm.223506 NM_153512 ENSMUSG00000045053 Kcng3 KV6.3|Kv10.1a|Kv10.1b potassium voltage-gated channel, subfamily G, member 3 protein-coding common_peak1_562_5005_0.307907227969336_12.443396189673_27.8962460857605 chr17 17623268 17626419 + 27.8962460857605 NA promoter-TSS (NM_172827) promoter-TSS (NM_172827) -354 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_171_2118_-0.550216079745507_10.7740598324994_27.889864011163 chr10 39486615 39489510 + 27.889864011163 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 118263 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_63_826_-0.942265633673395_9.22061070233458_27.880672447604 chr7 47008583 47009234 + 27.880672447604 NA promoter-TSS (NM_175318) promoter-TSS (NM_175318) -494 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding common_peak2_106_1326_-0.71498223601442_10.016461537363_27.8792513648794 chr14 61438873 61440658 + 27.8792513648794 NA exon (NM_008466, exon 1 of 17) exon (NM_008466, exon 1 of 17) 182 NM_008466 16648 Mm.25548 NM_008466 ENSMUSG00000021929 Kpna3 IPOA4 karyopherin (importin) alpha 3 protein-coding common_peak1_268_1770_0.500010624817094_11.0403538091605_27.8783980793369 chr13 47105083 47106950 + 27.8783980793369 NA intron (NM_025900, intron 1 of 10) CpG 205 NM_025900 110052 Mm.131150 NM_025900 ENSMUSG00000021377 Dek 1810019E15Rik|D13H6S231E DEK oncogene (DNA binding) protein-coding common_peak2_227_1387_0.558931489344626_10.7182575972506_27.865588230942 chr4 40947123 40949504 + 27.865588230942 NA promoter-TSS (NM_001171739) promoter-TSS (NM_001171739) -19 NM_001171739 12017 Mm.688 NM_009736 ENSMUSG00000028416 Bag1 BAG-1|Rap46 BCL2-associated athanogene 1 protein-coding common_peak1_280_1886_0.485712779600615_11.1247350974008_27.8387058488452 chr18 36734180 36736170 + 27.8387058488452 NA exon (NM_028036, exon 1 of 12) exon (NM_028036, exon 1 of 12) 105 NM_028036 71983 Mm.135188 NM_028036 ENSMUSG00000006850 Tmco6 2410015B03Rik transmembrane and coiled-coil domains 6 protein-coding common_peak2_164_2030_-0.562548989756952_10.7067000294177_27.8325513468006 chr17 84956040 84957807 + 27.8325513468006 NA intron (NM_001159497, intron 1 of 5) intron (NM_001159497, intron 1 of 5) 182 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak1_185_2293_-0.526220643941878_10.9005393540449_27.8319552118616 chr4 42999119 43000568 + 27.8319552118616 NA intron (NM_009503, intron 1 of 16) CpG 664 NM_009503 269523 Mm.245976 NM_009503 ENSMUSG00000028452 Vcp 3110001E05|CDC48|p97|p97/VCP valosin containing protein protein-coding common_peak1_214_2662_-0.485003956078343_11.1363347351714_27.8316372050386 chr4 46450337 46452788 + 27.8316372050386 NA intron (NM_130889, intron 1 of 6) CpG 445 NM_130889 67628 Mm.263913 NM_130889 ENSMUSG00000028333 Anp32b 2410015B15Rik|PAL31|PHAPI2a|Ssp29 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B protein-coding common_peak1_90_1138_-0.781206988988064_9.76294853721408_27.8292189540808 chr19 53420269 53421261 + 27.8292189540808 NA Intergenic MIR|SINE|MIR -30192 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak2_354_2638_0.415489497399069_11.5735203840258_27.8272403856852 chr8 117525558 117529925 + 27.8272403856852 NA intron (NM_172285, intron 2 of 32) intron (NM_172285, intron 2 of 32) 29450 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak1_248_1581_0.52610650084884_10.8905871348972_27.788272693509 chr17 21531867 21533484 + 27.788272693509 NA intron (NR_131123, intron 2 of 2) CpG -2864 NM_144515 22710 Mm.296100 NM_144515 ENSMUSG00000051341 Zfp52 KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29 zinc finger protein 52 protein-coding common_peak1_742_7287_0.25696627915138_12.9597903833777_27.7872847735702 chr11 98936370 98943325 + 27.7872847735702 NA intron (NM_001177303, intron 1 of 8) intron (NM_001177303, intron 1 of 8) 136 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_36_522_-1.25088348503553_8.40522539372918_27.7825814093662 chr9 44396224 44396923 + 27.7825814093662 NA promoter-TSS (NM_001293631) promoter-TSS (NM_001293631) -354 NM_001293631 14385 Mm.30087 NM_008063 ENSMUSG00000032114 Slc37a4 100043178|G6PT|G6pt1|GSD-1b|mG6PT solute carrier family 37 (glucose-6-phosphate transporter), member 4 protein-coding common_peak1_163_2017_-0.564042571668219_10.6966891732722_27.767214924546 chr4 151861179 151863246 + 27.767214924546 NA promoter-TSS (NM_001081557) promoter-TSS (NM_001081557) -444 NM_001195565 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak1_95_1196_-0.758207346478695_9.84610376370416_27.7663175802417 chr12 118300432 118301527 + 27.7663175802417 NA intron (NM_009239, intron 1 of 5) G-rich|Low_complexity|Low_complexity 461 NM_009239 20688 Mm.34699 NM_009239 ENSMUSG00000025323 Sp4 5730497N03Rik|HF-1b|HF1-b trans-acting transcription factor 4 protein-coding common_peak2_126_1565_-0.650657803116996_10.2875395957325_27.7654564830873 chr11 101626585 101628791 + 27.7654564830873 NA promoter-TSS (NM_025654) promoter-TSS (NM_025654) -261 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding common_peak2_75_226_1.22704033847869_8.44006865653026_27.7588538733154 chr9 62367355 62368552 + 27.7588538733154 NA intron (NM_009672, intron 1 of 6) intron (NM_009672, intron 1 of 6) 26610 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding unique_peak2_10_231_-2.22479556361998_6.74558321331758_27.7468504558015 chr7 51756653 51758130 + 27.7468504558015 NA Intergenic Intergenic 104876 NM_001115087 100040608 Mm.322643 NM_001115087 ENSMUSG00000092118 Fancf A730016A17 Fanconi anemia, complementation group F protein-coding common_peak1_319_4048_-0.385766455300258_11.7904667000263_27.7449626055322 chr9 21134481 21137305 + 27.7449626055322 NA Intergenic PB1D7|SINE|Alu -4618 NM_001205312 54721 Mm.20249 NM_018793 ENSMUSG00000032175 Tyk2 JTK1 tyrosine kinase 2 protein-coding common_peak2_102_392_0.973162381518133_9.10496669301767_27.7393699944015 chr4 151043729 151044796 + 27.7393699944015 NA 5' UTR (NM_001289878, exon 1 of 22) 5' UTR (NM_001289878, exon 1 of 22) 403 NM_011067 18628 Mm.121361 NM_011067 ENSMUSG00000028957 Per3 2810049O06Rik|mPer3 period circadian clock 3 protein-coding common_peak2_616_5673_0.289278481695966_12.6147896761223_27.7356664979338 chr17 46855324 46859039 + 27.7356664979338 NA Intergenic CpG -25768 NM_001100452 210982 Mm.37642 NM_001100452 ENSMUSG00000036568 Gltscr1l mKIAA0240 GLTSCR1-like protein-coding common_peak1_58_769_-0.983188230540438_9.09712052031204_27.7146447360461 chr9 110676943 110677845 + 27.7146447360461 NA intron (NM_028312, intron 1 of 6) (GAAAA)n|Simple_repeat|Simple_repeat 20891 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_106_418_0.948163985656421_9.18488842652756_27.7145535239171 chr10 45066552 45067877 + 27.7145535239171 NA promoter-TSS (NM_011156) promoter-TSS (NM_011156) 0 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak2_119_508_0.870359208894721_9.42670145052305_27.7046301152191 chr14 13960051 13962057 + 27.7046301152191 NA intron (NM_001285780, intron 1 of 8) CpG 259 NM_001285780 66231 Mm.295875 NM_025435 ENSMUSG00000053453 Thoc7 Nif3l1bp1 THO complex 7 protein-coding common_peak1_74_221_1.23573384193956_8.41228278731989_27.7041584855262 chr9 62367331 62368439 + 27.7041584855262 NA intron (NM_009672, intron 1 of 6) intron (NM_009672, intron 1 of 6) 26542 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_277_1859_0.487510185983563_11.1048419989872_27.7013335730975 chr19 5272013 5274206 + 27.7013335730975 NA promoter-TSS (NM_153129) promoter-TSS (NM_153129) 10 NM_153129 107975 Mm.234923 NM_153129 ENSMUSG00000024855 Pacs1 AI325977 phosphofurin acidic cluster sorting protein 1 protein-coding common_peak1_96_1207_-0.753066375961669_9.86187155134424_27.7001010162249 chr10 19582204 19583944 + 27.7001010162249 NA Intergenic Intergenic -8884 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_101_1265_-0.731778601114529_9.94017238887108_27.6904855390749 chr18 70533013 70534284 + 27.6904855390749 NA Intergenic Intergenic -3327 NM_001289515 26447 Mm.244352 NM_011972 ENSMUSG00000038425 Poli Rad30b polymerase (DNA directed), iota protein-coding common_peak2_147_714_0.751208841918372_9.85740385262494_27.689014194291 chr15 5445599 5447983 + 27.689014194291 NA Intergenic Intergenic -49527 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_381_2928_0.394791339293784_11.7135881475263_27.6752584930662 chr7 140855011 140858136 + 27.6752584930662 NA promoter-TSS (NM_018742) promoter-TSS (NM_018742) -190 NM_018742 54399 Mm.155696 NM_018742 ENSMUSG00000025484 Bet1l 2610021K23Rik|Gs15 Bet1 golgi vesicular membrane trafficking protein like protein-coding common_peak1_648_6076_0.279764241624619_12.7090256973574_27.664345591911 chr15 38469638 38474080 + 27.664345591911 NA Intergenic Intergenic 18688 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak2_525_4566_0.32002225608346_12.3170422024201_27.6027810278181 chr19 40659023 40667923 + 27.6027810278181 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 3703 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak1_146_1806_-0.598370037800631_10.5201957719643_27.6026682552227 chr11 83656780 83658798 + 27.6026682552227 NA Intergenic B3A|SINE|B2 -4795 NM_013652 20303 Mm.244263 NM_013652 ENSMUSG00000018930 Ccl4 AT744.1|Act-2|MIP-1B|Mip1b|Scya4 chemokine (C-C motif) ligand 4 protein-coding common_peak1_42_587_-1.15394517458241_8.62269975754516_27.601502799713 chr6 30326276 30326963 + 27.601502799713 NA Intergenic MTE2b|LTR|ERVL-MaLR -22080 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak2_292_2007_0.470050109242077_11.2065686085718_27.5901452242367 chr16 92696418 92699133 + 27.5901452242367 NA promoter-TSS (NM_009821) promoter-TSS (NM_009821) -446 NM_009821 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_78_244_1.18546115211075_8.52936851505794_27.5808724774554 chr12 30911001 30911861 + 27.5808724774554 NA promoter-TSS (NR_110343) promoter-TSS (NR_110343) 181 NM_021330 11431 Mm.359831 NM_021330 ENSMUSG00000044573 Acp1 4632432E04Rik|AI427468|Acp-1|LMW-PTP|Lmptp acid phosphatase 1, soluble protein-coding common_peak2_138_1707_-0.616107478827889_10.4300385202065_27.5722648555273 chr10 5823060 5825712 + 27.5722648555273 NA promoter-TSS (NM_175374) promoter-TSS (NM_175374) -443 NM_175374 108853 Mm.55082 NM_175374 ENSMUSG00000019774 Mtrf1l 9130004K12Rik mitochondrial translational release factor 1-like protein-coding common_peak1_241_3007_-0.451409695855833_11.3288840037497_27.5698165677933 chr11 98549361 98552226 + 27.5698165677933 NA promoter-TSS (NM_001166494) promoter-TSS (NM_001166494) -304 NM_199419 69376 Mm.55996 NM_027061 ENSMUSG00000017195 Zpbp2 1700017D11Rik|2610022C02Rik|ZPBPL zona pellucida binding protein 2 protein-coding common_peak1_152_1879_-0.584711653284259_10.5841611199229_27.5576198197736 chr10 118100868 118102916 + 27.5576198197736 NA Intergenic L2|LINE|L2 -39895 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak1_110_1371_-0.698146598808117_10.0729914667688_27.555666395326 chr4 144896836 144898062 + 27.555666395326 NA intron (NM_011303, intron 1 of 5) intron (NM_011303, intron 1 of 5) 4312 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak2_119_509_0.867527618111557_9.42811724591464_27.5537393376771 chr2 33430611 33432238 + 27.5537393376771 NA promoter-TSS (NM_001085507) promoter-TSS (NM_001085507) -100 NM_001276332 241311 Mm.296512 NM_001085507 ENSMUSG00000068966 Zbtb34 Gm349|mKIAA1993 zinc finger and BTB domain containing 34 protein-coding common_peak1_22_365_-1.57723903419053_7.72708032118878_27.5500189760231 chr15 51991967 51992450 + 27.5500189760231 NA promoter-TSS (NM_009009) promoter-TSS (NM_009009) -448 NM_009009 19357 Mm.182628 NM_009009 ENSMUSG00000022314 Rad21 SCC1|mKIAA0078 RAD21 cohesin complex component protein-coding common_peak1_233_1445_0.545838439996384_10.7707710569493_27.5474029656877 chr5 105414783 105416543 + 27.5474029656877 NA promoter-TSS (NM_001033550) promoter-TSS (NM_001033550) -112 NM_001033550 433926 Mm.439781 NM_001033550 ENSMUSG00000070639 Lrrc8b R75581|Ta-lrrp|mKIAA0231 leucine rich repeat containing 8 family, member B protein-coding common_peak2_58_138_1.48658533231832_7.86223373888267_27.5126672720986 chr8 69399106 69400015 + 27.5126672720986 NA Intergenic CpG -4016 NR_038043 378466 Mm.37846 NM_194351 ENSMUSG00000110444 Gm10033 9330175B10Rik|ENSMUSG00000057924|Gm10311 predicted gene 10033 ncRNA common_peak2_636_5928_0.282308070595715_12.6747271166877_27.5087659938445 chr11 97658471 97665287 + 27.5087659938445 NA Intergenic Intergenic -1533 NM_139311 246198 Mm.23685 NM_139311 ENSMUSG00000038437 Mllt6 AI315037|Af17 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6 protein-coding common_peak2_120_516_0.862546374320514_9.44529365747519_27.50517013924 chr10 58350540 58352825 + 27.50517013924 NA intron (NM_026148, intron 1 of 9) intron (NM_026148, intron 1 of 9) -19772 NM_201242 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak1_44_75_1.87825112412105_7.18705307550411_27.4716611712955 chr11 6526212 6526960 + 27.4716611712955 NA intron (NR_045893, intron 2 of 3) intron (NR_045893, intron 2 of 3) 2174 NR_045893 100041286 Mm.459507 NR_045893 ENSMUSG00000085156 Snhg15 Gm11974|OTTMUSG00000005115 small nucleolar RNA host gene 15 ncRNA common_peak1_32_475_-1.31749781564706_8.23606885548441_27.4600081965828 chr15 12204109 12204670 + 27.4600081965828 NA promoter-TSS (NM_172958) promoter-TSS (NM_172958) -705 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak2_74_949_-0.861633994928644_9.46096670575399_27.458906161951 chr7 73550450 73553836 + 27.458906161951 NA intron (NR_037569, intron 3 of 4) intron (NR_037569, intron 3 of 4) 6252 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_68_880_-0.90040288867362_9.33279676458361_27.4584719300098 chr11 77981726 77982495 + 27.4584719300098 NA promoter-TSS (NM_174852) promoter-TSS (NM_174852) -706 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding common_peak1_285_3585_-0.409357115099592_11.6034812153186_27.4516570786258 chr2 6704085 6707856 + 27.4516570786258 NA intron (NM_001310447, intron 1 of 11) intron (NM_001310447, intron 1 of 11) 15692 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_50_676_-1.05534124644754_8.87534140035123_27.416532755378 chr14 121372747 121373660 + 27.416532755378 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 6027 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding unique_peak2_8_206_-2.41541390681301_6.48578000409282_27.415855334108 chr7 51755428 51756650 + 27.415855334108 NA Intergenic Intergenic 106228 NM_001115087 100040608 Mm.322643 NM_001115087 ENSMUSG00000092118 Fancf A730016A17 Fanconi anemia, complementation group F protein-coding common_peak1_18_319_-1.72156389149047_7.46114614914213_27.4127687702217 chr12 51848168 51848598 + 27.4127687702217 NA Intergenic Intergenic -18847 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak2_122_1512_-0.657618490998027_10.2343870267177_27.403947911253 chr18 12167695 12169897 + 27.403947911253 NA promoter-TSS (NM_029623) promoter-TSS (NM_029623) 66 NM_029623 76482 Mm.196596 NM_029623 ENSMUSG00000024410 3110002H16Rik 2400010D15Rik|Mic-1|Mic1 RIKEN cDNA 3110002H16 gene protein-coding common_peak1_132_1633_-0.630291955483322_10.359046290404_27.3965584495019 chr12 86833992 86834758 + 27.3965584495019 NA Intergenic B1_Mur3|SINE|Alu 50439 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_54_720_-1.01256443085491_8.98757323381337_27.3959734564117 chr19 57360177 57360843 + 27.3959734564117 NA promoter-TSS (NM_145505) promoter-TSS (NM_145505) 389 NR_040316 320879 Mm.375089 NR_040316 ENSMUSG00000097785 B230217O12Rik - RIKEN cDNA B230217O12 gene ncRNA common_peak1_117_496_0.875036674665894_9.39462037889523_27.3929300182233 chr3 100692157 100692930 + 27.3929300182233 NA Intergenic L1MEi|LINE|L1 -7070 NM_010763 17156 Mm.271617 NM_010763 ENSMUSG00000008763 Man1a2 AI428775|AI528764|AI854422|Man1b|PCR2 mannosidase, alpha, class 1A, member 2 protein-coding common_peak2_88_1110_-0.784624732624904_9.72533073507664_27.3768477716544 chr8 18845582 18847388 + 27.3768477716544 NA 5' UTR (NM_026792, exon 1 of 8) 5' UTR (NM_026792, exon 1 of 8) 206 NM_026792 52123 Mm.24117 NM_026792 ENSMUSG00000031467 Agpat5 1110013A05Rik|D8Ertd319e 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) protein-coding unique_peak2_17_308_-1.76677766603171_7.38807419488852_27.3702002699363 chrX 103509026 103510235 + 27.3702002699363 NA Intergenic Intergenic 16072 NR_015508 70252 Mm.380486 NR_015508 ENSMUSG00000097571 Jpx 2010000I03Rik|2510040I06Rik|Enox Jpx transcript, Xist activator (non-protein coding) ncRNA common_peak2_532_4654_0.315882727694104_12.3425068162932_27.3652716661699 chr6 113648342 113656701 + 27.3652716661699 NA intron (NM_001113553, intron 2 of 11) MLT1J|LTR|ERVL-MaLR 14054 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding common_peak1_16_297_-1.81563225948799_7.31135239071817_27.355557839959 chr4 59231978 59232379 + 27.355557839959 NA Intergenic (TAA)n|Simple_repeat|Simple_repeat -27873 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_201_2489_-0.498469522163631_11.0326952658736_27.3508419218492 chr7 83658281 83661100 + 27.3508419218492 NA intron (NM_010551, intron 12 of 18) intron (NM_010551, intron 12 of 18) 27673 NM_023377 170460 Mm.357953 NM_023377 ENSMUSG00000046027 Stard5 2310058G22Rik|AI607880|D7Ertd152e StAR-related lipid transfer (START) domain containing 5 protein-coding common_peak2_49_664_-1.06458302706581_8.84491901685565_27.350433586322 chr18 73764170 73766242 + 27.350433586322 NA Intergenic Intergenic -10727 NM_053255 114615 Mm.50642 NM_053255 ENSMUSG00000036941 Elac1 2610018O07Rik|8430417G19Rik elaC ribonuclease Z 1 protein-coding common_peak2_331_2405_0.430309564364986_11.4475757093586_27.3399173487099 chr2 91181630 91184935 + 27.3399173487099 NA promoter-TSS (NM_001177719) promoter-TSS (NM_001177719) -235 NM_145527 228355 Mm.36410 NM_145527 ENSMUSG00000040687 Madd 9630059K23Rik|IG20 MAP-kinase activating death domain protein-coding common_peak1_116_489_0.880440026758574_9.37685795238186_27.3340451196071 chr12 104985551 104987013 + 27.3340451196071 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 12395 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding unique_peak1_46_84_1.79374015128832_7.30626101178186_27.3240925171696 chr8 33902259 33903280 + 27.3240925171696 NA intron (NM_001286168, intron 1 of 7) intron (NM_001286168, intron 1 of 7) 27094 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_136_634_0.78572477487533_9.70347516909719_27.3173991229633 chr11 30771108 30772642 + 27.3173991229633 NA promoter-TSS (NM_134013) promoter-TSS (NM_134013) 100 NM_134013 103554 Mm.240066 NM_134013 ENSMUSG00000040850 Psme4 AA409398|AU041366|TEMO|mKIAA0077 proteasome (prosome, macropain) activator subunit 4 protein-coding unique_peak1_28_21_2.88923169587527_5.90404746657493_27.3172544713392 chr7 81006495 81007033 + 27.3172544713392 NA intron (NM_178707, intron 1 of 9) intron (NM_178707, intron 1 of 9) 13080 NM_178707 233410 Mm.29525 NM_178707 ENSMUSG00000005621 Zfp592 8430405N24|A730014M16Rik|Znf592|mKIAA0211 zinc finger protein 592 protein-coding common_peak1_551_4884_0.308289406950113_12.4082875503308_27.308982798284 chr17 31072050 31077659 + 27.308982798284 NA intron (NM_009593, intron 2 of 14) intron (NM_009593, intron 2 of 14) 17160 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak2_105_414_0.945386550395181_9.16966080143188_27.3002811808512 chr3 97900520 97902035 + 27.3002811808512 NA promoter-TSS (NM_011342) promoter-TSS (NM_011342) 50 NM_011342 20333 Mm.2551 NM_011342 ENSMUSG00000027879 Sec22b 4930564D15Rik|AA517334|AI480645|C81333|ERS-24|Sec22l1 SEC22 homolog B, vesicle trafficking protein protein-coding common_peak2_57_753_-0.983145087569739_9.06684816948379_27.2968740226463 chr7 110843305 110844626 + 27.2968740226463 NA intron (NM_025999, intron 1 of 5) intron (NM_025999, intron 1 of 5) 416 NM_025999 67150 Mm.96867 NM_025999 ENSMUSG00000030788 Rnf141 2610110L04Rik|AA792898|AU022812|ZFP36|ZNF230 ring finger protein 141 protein-coding common_peak2_326_2354_0.434365407182776_11.4186940480915_27.2939402561206 chr18 80468358 80470973 + 27.2939402561206 NA promoter-TSS (NM_026295) promoter-TSS (NM_026295) 2 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding common_peak1_174_933_0.662272561692193_10.1984150205558_27.2852624758833 chr11 55025571 55028369 + 27.2852624758833 NA intron (NM_013472, intron 1 of 25) intron (NM_013472, intron 1 of 25) 6501 NM_001110211 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak2_73_217_1.23821163762084_8.38729014358735_27.2771596785412 chr16 65562090 65562964 + 27.2771596785412 NA 5' UTR (NM_026879, exon 1 of 6) 5' UTR (NM_026879, exon 1 of 6) 170 NM_026879 68942 Mm.432944 NM_026879 ENSMUSG00000004843 Chmp2b 1190006E07Rik charged multivesicular body protein 2B protein-coding unique_peak1_40_60_2.03070592750254_6.94609030131416_27.2648409634172 chr8 13889730 13890509 + 27.2648409634172 NA intron (NM_025556, intron 1 of 3) CpG 152 NM_025556 66423 Mm.29063 NM_025556 ENSMUSG00000031458 Coprs 1700029I03Rik|2410022L05Rik|AA409325|AI256813|C85432|Copr5 coordinator of PRMT5, differentiation stimulator protein-coding common_peak2_519_4502_0.320080691550119_12.2967111081169_27.2615049108714 chr6 48766654 48772743 + 27.2615049108714 NA intron (NM_031247, intron 1 of 4) B1_Mus2|SINE|Alu 1153 NM_031247 83408 Mm.333050 NM_031247 ENSMUSG00000039264 Gimap3 2010110D23Rik|Gimap5|Ian4 GTPase, IMAP family member 3 protein-coding common_peak2_565_5055_0.302973652452017_12.4552675744031_27.2605124557052 chr12 76532411 76539002 + 27.2605124557052 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) 2146 NM_153804 263406 Mm.291854 NM_153804 ENSMUSG00000052609 Plekhg3 BC030417 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 protein-coding common_peak1_497_4242_0.329383733217254_12.2155608298994_27.2599545055964 chr9 25251153 25253992 + 27.2599545055964 NA 5' UTR (NM_009859, exon 1 of 13) 5' UTR (NM_009859, exon 1 of 13) 133 NM_001205367 235072 Mm.270259 NM_009859 ENSMUSG00000001833 Sept7 Cdc10|E430034N22 septin 7 protein-coding common_peak1_74_947_-0.858593540608592_9.45944647859396_27.2384549355819 chr12 85824587 85825526 + 27.2384549355819 NA promoter-TSS (NM_021446) promoter-TSS (NM_021446) 106 NM_001081423 320244 Mm.132172 NM_177114 ENSMUSG00000012609 Ttll5 1700048H13Rik|2310009M18Rik|4930556H18Rik|AI428864|D630041K24Rik|R75373|Stamp|mKIAA0998 tubulin tyrosine ligase-like family, member 5 protein-coding common_peak1_47_640_-1.08379276734029_8.7822841629486_27.2326156029908 chr15 61984708 61985808 + 27.2326156029908 NA promoter-TSS (NM_001177353) promoter-TSS (NM_001177353) -83 NM_001177354 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding unique_peak2_9_216_-2.29702931600006_6.61303657444445_27.2296864098798 chr18 43507385 43508475 + 27.2296864098798 NA Intergenic Intergenic -69644 NM_001291455 22240 Mm.8180 NM_009468 ENSMUSG00000024501 Dpysl3 CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1 dihydropyrimidinase-like 3 protein-coding common_peak1_49_97_1.69791765920753_7.46366867371897_27.2272004395732 chr13 63246170 63247051 + 27.2272004395732 NA intron (NM_001289924, intron 13 of 16) intron (NM_001289924, intron 13 of 16) 6581 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_164_2022_-0.556855070019083_10.7038530695487_27.2240503649346 chr9 44406403 44408553 + 27.2240503649346 NA promoter-TSS (NM_024266) promoter-TSS (NM_024266) 70 NM_021789 60409 Mm.29814 NM_021789 ENSMUSG00000032112 Trappc4 1500017G03Rik|AI303617|HSPC172|PTD009|Sbd|Sbdn|Sdcbp2|TRS23 trafficking protein particle complex 4 protein-coding common_peak2_543_4789_0.310787876282408_12.3812038787647_27.2099920424749 chr1 55025539 55030555 + 27.2099920424749 NA promoter-TSS (NM_031179) promoter-TSS (NM_031179) -569 NM_031179 81898 Mm.279736 NM_031179 ENSMUSG00000025982 Sf3b1 155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4 splicing factor 3b, subunit 1 protein-coding common_peak1_85_287_1.10241447999799_8.72113224144131_27.2091938584019 chr4 145584933 145585946 + 27.2091938584019 NA Intergenic Intergenic -31707 NM_001205101 433801 Mm.276881 NM_001013808 ENSMUSG00000078502 Gm13212 OTTMUSG00000010965 predicted gene 13212 protein-coding common_peak2_120_518_0.856976116277567_9.44807878649667_27.2072916398046 chr3 30855477 30857004 + 27.2072916398046 NA 5' UTR (NM_001134385, exon 1 of 4) 5' UTR (NM_001134385, exon 1 of 4) 290 NM_001286994 71862 Mm.272019 NM_027965 ENSMUSG00000037661 Gpr160 1700025D19Rik|GPCR150 G protein-coupled receptor 160 protein-coding unique_peak2_60_787_-0.957532368409403_9.14328563525167_27.191449523 chr3 103404535 103407441 + 27.191449523 NA Intergenic Intergenic 126695 NM_001079830 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding common_peak1_175_2158_-0.536512851769485_10.8078911021378_27.1890059884834 chr7 127776301 127778019 + 27.1890059884834 NA promoter-TSS (NM_178029) promoter-TSS (NM_178029) -229 NM_178029 233904 Mm.435494 NM_010940 ENSMUSG00000042308 Setd1a BC010250|KMT2F|Nsccn1|mKIAA0339|mNSC1 SET domain containing 1A protein-coding common_peak1_442_3610_0.354969942177297_11.9956676760373_27.18371467545 chr17 25271791 25274661 + 27.18371467545 NA promoter-TSS (NR_027452) promoter-TSS (NR_027452) 205 NM_001177610 22196 Mm.240044 NM_011665 ENSMUSG00000015120 Ube2i 5830467E05Rik|F830028O17Rik|UBC9|Ubce2i|Ubce9 ubiquitin-conjugating enzyme E2I protein-coding common_peak1_23_373_-1.53311899179554_7.78033496398987_27.1782887054266 chr19 4793407 4793920 + 27.1782887054266 NA intron (NM_001290127, intron 1 of 3) intron (NM_001290127, intron 1 of 3) 238 NM_009032 19653 Mm.426069 NM_009032 ENSMUSG00000094936 Rbm4 4921506I22Rik|Lark1|Mlark|Rbm4a|lark RNA binding motif protein 4 protein-coding common_peak2_784_7860_0.245084086825765_13.0630391778711_27.169818089793 chr11 101657374 101668954 + 27.169818089793 NA Intergenic Intergenic -2377 NM_025404 80981 Mm.266840 NM_025404 ENSMUSG00000034936 Arl4d 1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5 ADP-ribosylation factor-like 4D protein-coding common_peak1_152_1874_-0.580869586989865_10.5822400867757_27.1637959498742 chr1 51585240 51587091 + 27.1637959498742 NA Intergenic Intergenic -107766 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak1_30_451_-1.35349675768088_8.14343058357475_27.1540995386849 chr6 128843816 128844437 + 27.1540995386849 NA Intergenic Intergenic -17811 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak2_94_1178_-0.754878212704551_9.82590889662749_27.1405901442967 chr7 80859901 80861760 + 27.1405901442967 NA Intergenic Intergenic -1278 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak2_73_934_-0.862426592377233_9.43760925858638_27.1386117046748 chr19 11434532 11436385 + 27.1386117046748 NA Intergenic L1VL4|LINE|L1 -8100 NM_021718 60361 Mm.33957 NM_021718 ENSMUSG00000056290 Ms4a4b AI463180|Chandra|Ly116 membrane-spanning 4-domains, subfamily A, member 4B protein-coding common_peak1_100_382_0.9756476116805_9.06902438776521_27.1245939501071 chr9 54699262 54700446 + 27.1245939501071 NA exon (NM_021422, exon 1 of 7) exon (NM_021422, exon 1 of 7) 295 NM_021422 58233 Mm.489676 NM_021422 ENSMUSG00000032285 Dnaja4 1110021L12Rik|AV358213|Dj4|Hsj4|mmDjA4 DnaJ heat shock protein family (Hsp40) member A4 protein-coding common_peak1_249_1598_0.517778866720729_10.9018436568407_27.1178095546537 chr11 82780496 82782304 + 27.1178095546537 NA promoter-TSS (NR_126068) promoter-TSS (NR_126068) 291 NM_010716 16882 Mm.277136 NM_010716 ENSMUSG00000020697 Lig3 D11Wsu78e ligase III, DNA, ATP-dependent protein-coding common_peak1_302_2113_0.455223048376059_11.2733711855707_27.1149019265426 chr11 20200402 20202519 + 27.1149019265426 NA promoter-TSS (NM_008996) promoter-TSS (NM_008996) -142 NM_008996 19324 Mm.271944 NM_008996 ENSMUSG00000020149 Rab1a Gtbp|Rab-1|Rab1|Ypt1|mKIAA3012 RAB1A, member RAS oncogene family protein-coding common_peak2_858_8864_0.231093560056259_13.2294516958142_27.0905104951948 chr16 23984114 23991334 + 27.0905104951948 NA intron (NM_009744, intron 1 of 9) CpG 888 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_226_2805_-0.464354546632167_11.2221220203038_27.0902410415038 chr11 6291008 6292984 + 27.0902410415038 NA promoter-TSS (NM_001252288) promoter-TSS (NM_001252288) 399 NM_001252283 18293 Mm.276348 NM_010956 ENSMUSG00000020456 Ogdh 2210403E04Rik|2210412K19Rik|AA409584|d1401|mKIAA4192 oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) protein-coding common_peak2_117_498_0.869242710890921_9.39751736078272_27.0898802876461 chr19 46477936 46480199 + 27.0898802876461 NA intron (NM_015752, intron 10 of 11) intron (NM_015752, intron 10 of 11) -22581 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak1_30_27_2.6593272826767_6.13701856339596_27.0846847345653 chr1 24099784 24100416 + 27.0846847345653 NA 5' UTR (NM_026604, exon 1 of 21) 5' UTR (NM_026604, exon 1 of 21) 241 NM_026604 68187 Mm.87130 NM_026604 ENSMUSG00000026153 Fam135a 4921533L14Rik|AI256732|AI835491 family with sequence similarity 135, member A protein-coding common_peak2_126_1557_-0.643268823887624_10.2838451061179_27.0745579677763 chr10 42026328 42029388 + 27.0745579677763 NA Intergenic Intergenic -9476 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding unique_peak1_32_33_2.48985710641054_6.33239139445561_27.0645260778296 chr1 127208164 127208883 + 27.0645260778296 NA intron (NM_145128, intron 1 of 17) intron (NM_145128, intron 1 of 17) 3537 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak2_289_1985_0.46773130504887_11.1895155600528_27.0626308944048 chr3 110249373 110251558 + 27.0626308944048 NA exon (NM_178891, exon 1 of 1) exon (NM_178891, exon 1 of 1) 534 NM_178891 99890 Mm.36115 NM_178891 ENSMUSG00000049300 Prmt6 AW124876|BB233495|Hrmt1l6 protein arginine N-methyltransferase 6 protein-coding common_peak2_319_2286_0.438342821964527_11.3784120613939_27.0564385741279 chr4 151056854 151058659 + 27.0564385741279 NA intron (NM_009498, intron 1 of 4) CpG 197 NM_009498 22319 Mm.273930 NM_009498 ENSMUSG00000028955 Vamp3 D130027G05Rik|VAMP-3|ceb vesicle-associated membrane protein 3 protein-coding common_peak2_426_3433_0.362381236310307_11.9268649421573_27.053090735068 chr6 38340771 38348087 + 27.053090735068 NA intron (NM_028864, intron 1 of 8) intron (NM_028864, intron 1 of 8) 10174 NM_028864 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding common_peak1_217_2688_-0.47449949315688_11.1556042932944_27.053078946034 chr9 64791864 64793804 + 27.053078946034 NA Intergenic Intergenic -18177 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak1_63_819_-0.930002214007565_9.21447899250166_27.0519604916866 chr10 39612951 39613861 + 27.0519604916866 NA intron (NM_134000, intron 1 of 8) intron (NM_134000, intron 1 of 8) 472 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak2_187_1044_0.627068482830486_10.3428214683835_27.0512493005269 chr12 82168746 82171118 + 27.0512493005269 NA promoter-TSS (NM_001167983) promoter-TSS (NM_001167983) -84 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak1_74_224_1.21636851707263_8.42196544975335_27.0318865849918 chr18 75342283 75343041 + 27.0318865849918 NA Intergenic CpG -24703 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_233_1451_0.53986453895175_10.7737580074716_27.010224827207 chr3 104817221 104818985 + 27.010224827207 NA exon (NM_001163440, exon 2 of 21) exon (NM_001163440, exon 2 of 21) 202 NM_008619 17454 Mm.1597 NM_008619 ENSMUSG00000002227 Mov10 C77703|Mov-10 Moloney leukemia virus 10 protein-coding common_peak2_179_2206_-0.52846765434227_10.8436370871085_27.0086766281298 chr13 34873797 34876835 + 27.0086766281298 NA promoter-TSS (NM_013830) promoter-TSS (NM_013830) -178 NM_013830 19134 Mm.10027 NM_013830 ENSMUSG00000021413 Prpf4b 2610037H07|Prp4|Prp4k|Prpk|cbp143 pre-mRNA processing factor 4B protein-coding common_peak1_15_284_-1.85856484592694_7.22553568608864_26.9837623188839 chr1 52019274 52019682 + 26.9837623188839 NA intron (NM_011487, intron 3 of 23) intron (NM_011487, intron 3 of 23) 11238 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 protein-coding common_peak1_456_3773_0.346333458556099_12.0550454368785_26.9825432777227 chr16 52059211 52063716 + 26.9825432777227 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 29914 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak2_121_527_0.846737642874874_9.46776294079589_26.978961257032 chr3 100691952 100693106 + 26.978961257032 NA Intergenic L1MEi|LINE|L1 -7056 NM_010763 17156 Mm.271617 NM_010763 ENSMUSG00000008763 Man1a2 AI428775|AI528764|AI854422|Man1b|PCR2 mannosidase, alpha, class 1A, member 2 protein-coding common_peak1_127_1567_-0.638619647430971_10.2954000203997_26.9696445775471 chr11 48799512 48801028 + 26.9696445775471 NA promoter-TSS (NM_008143) promoter-TSS (NM_008143) -90 NM_008143 14694 Mm.5305 NM_008143 ENSMUSG00000020372 Rack1 AL033335|GB-like|Gnb2-rs1|Gnb2l1|p205 receptor for activated C kinase 1 protein-coding common_peak2_237_1488_0.533556642843898_10.806906360004_26.9695815460158 chr4 133157780 133163412 + 26.9695815460158 NA intron (NM_153423, intron 1 of 8) B3|SINE|B2 29963 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak2_328_2380_0.429315291421153_11.4320095509809_26.9209797304618 chr1 88584200 88589990 + 26.9209797304618 NA Intergenic Intergenic 35578 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA common_peak2_407_3224_0.372424265488545_11.8412955779423_26.9171288282125 chr15 102147128 102153266 + 26.9171288282125 NA promoter-TSS (NM_146064) promoter-TSS (NM_146064) -378 NM_146064 223920 Mm.358862 NM_146064 ENSMUSG00000023045 Soat2 ACAT2|D15Wsu97e sterol O-acyltransferase 2 protein-coding common_peak2_91_326_1.03853860096814_8.87241612598215_26.8977745778393 chr10 6987889 6989443 + 26.8977745778393 NA intron (NM_001304955, intron 5 of 6) intron (NM_001304955, intron 5 of 6) -8201 NM_001170801 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak1_56_130_1.51107571801272_7.78896086054381_26.8904513960442 chr8 69399252 69400024 + 26.8904513960442 NA Intergenic CpG -4094 NR_038043 378466 Mm.37846 NM_194351 ENSMUSG00000110444 Gm10033 9330175B10Rik|ENSMUSG00000057924|Gm10311 predicted gene 10033 ncRNA common_peak1_182_1003_0.637110413249484_10.2900987605755_26.882900926882 chr16 45157827 45159681 + 26.882900926882 NA promoter-TSS (NM_026402) promoter-TSS (NM_026402) -75 NM_026402 67841 Mm.41775 NM_026402 ENSMUSG00000022663 Atg3 2610016C12Rik|APG3|Apg3l|Atg3l|PC3-96 autophagy related 3 protein-coding common_peak2_134_622_0.787224800693913_9.67670075337096_26.8805645725292 chr15 82146208 82148135 + 26.8805645725292 NA promoter-TSS (NM_033218) promoter-TSS (NM_033218) -98 NM_033218 20788 Mm.9002 NM_033218 ENSMUSG00000022463 Srebf2 AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc sterol regulatory element binding factor 2 protein-coding common_peak1_216_1298_0.567032598551895_10.6267020147238_26.8802998419215 chr8 90907496 90909424 + 26.8802998419215 NA intron (NM_177224, intron 2 of 39) CpG -23789 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_39_549_-1.18554126959489_8.51051717361458_26.8666937895755 chr17 56716946 56717747 + 26.8666937895755 NA promoter-TSS (NM_178926) promoter-TSS (NM_178926) 353 NM_001166474 106639 Mm.37290 NM_178926 ENSMUSG00000054723 Vmac AI662250 vimentin-type intermediate filament associated coiled-coil protein protein-coding common_peak1_186_1037_0.627326945744143_10.33325420123_26.8568583213491 chr8 123101895 123103626 + 26.8568583213491 NA promoter-TSS (NR_028128) promoter-TSS (NR_028128) -298 NR_028128 100302565 NR_028128 Snord68 MBII-202 small nucleolar RNA, C/D box 68 snoRNA common_peak2_260_1706_0.499685003791399_10.9870898449234_26.8520613971499 chr14 121342106 121347470 + 26.8520613971499 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 34442 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_226_1389_0.549075579376861_10.7154069572993_26.8511381594672 chr6 41546778 41550523 + 26.8511381594672 NA Intergenic Intergenic 26874 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak2_112_1386_-0.682232574151202_10.096635785248_26.8395651530604 chr17 56255844 56257614 + 26.8395651530604 NA promoter-TSS (NM_010192) promoter-TSS (NM_010192) -64 NM_010192 14154 Mm.290813 NM_010192 ENSMUSG00000043683 Fem1a AW611390|Fem1aa feminization 1 homolog a (C. elegans) protein-coding common_peak1_17_305_-1.75270248081998_7.38103660228266_26.8058323540869 chrX 152342605 152343074 + 26.8058323540869 NA promoter-TSS (NM_029836) promoter-TSS (NM_029836) -355 NM_029836 52808 Mm.9997 NM_029836 ENSMUSG00000041096 Tspyl2 CDA1|CINAP|DENTT|DXBwg1396e|DXHXS1008E|E130307F10Rik TSPY-like 2 protein-coding common_peak1_390_3039_0.382337438356993_11.7610243275094_26.8020584452871 chr1 161766879 161771281 + 26.8020584452871 NA Intergenic Intergenic 19415 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_230_1426_0.542086437450587_10.7498128382011_26.799419375285 chr9 72110383 72112513 + 26.799419375285 NA promoter-TSS (NM_001253862) promoter-TSS (NM_001253862) -247 NM_001253862 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding common_peak1_592_5395_0.291544976795089_12.5434471213458_26.7981750425958 chr17 4993705 4997637 + 26.7981750425958 NA exon (NM_001085355, exon 1 of 20) exon (NM_001085355, exon 1 of 20) 597 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_387_3007_0.383974134058482_11.7465759187069_26.7773513623188 chr9 90113001 90115009 + 26.7773513623188 NA intron (NM_024431, intron 1 of 11) CpG 815 NM_001039147 21761 Mm.426209 NM_024431 ENSMUSG00000062270 Morf4l1 MORFRG15|MRG15|TEG-189|Tex189|mKIAA4002 mortality factor 4 like 1 protein-coding common_peak1_65_176_1.33632670876424_8.13576890446512_26.7743566009276 chr2 164485928 164487485 + 26.7743566009276 NA promoter-TSS (NM_001048228) promoter-TSS (NM_001048228) -171 NM_001048228 52840 Mm.256927 NM_026797 ENSMUSG00000017734 Dbndd2 1110017A21Rik|2900022J10Rik|AU041050|AW048677|D2Bwg0891e|Nkip|R74724 dysbindin (dystrobrevin binding protein 1) domain containing 2 protein-coding common_peak2_42_581_-1.13914817265433_8.61530125658112_26.7672268816557 chr9 44378423 44379419 + 26.7672268816557 NA promoter-TSS (NM_021395) promoter-TSS (NM_021395) -569 NM_021395 12282 Mm.116721 NM_021395 ENSMUSG00000032115 Hyou1 AI415631|CBP-140|Cab140|Grp170|Orp150 hypoxia up-regulated 1 protein-coding unique_peak1_24_12_3.38557547399529_5.39322745513874_26.7662019664006 chr5 36569881 36570543 + 26.7662019664006 NA intron (NM_001113362, intron 3 of 14) intron (NM_001113362, intron 3 of 14) 12185 NM_133910 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding common_peak1_78_988_-0.827727619645794_9.53596290093621_26.7590708503406 chr4 19569250 19570321 + 26.7590708503406 NA intron (NM_027769, intron 1 of 15) CpG 319 NM_027769 70568 Mm.38390 NM_027769 ENSMUSG00000028228 Cpne3 5430428M23Rik|5730450C07Rik|C85108|CPN3 copine III protein-coding common_peak1_102_1268_-0.717928470064367_9.95051211880892_26.7524489565064 chr9 124121552 124122960 + 26.7524489565064 NA intron (NM_009917, intron 1 of 1) intron (NM_009917, intron 1 of 1) 713 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding unique_peak2_20_338_-1.62766681933785_7.59130805346742_26.7169578432111 chr2 104172355 104173880 + 26.7169578432111 NA intron (NM_001033347, intron 16 of 20) MTD|LTR|ERVL-MaLR 50348 NM_026634 68243 Mm.158191 NM_026634 ENSMUSG00000032671 A930018P22Rik - RIKEN cDNA A930018P22 gene protein-coding common_peak1_56_737_-0.982978286510223_9.03598786280529_26.7067515462551 chr6 114883677 114884706 + 26.7067515462551 NA intron (NM_177683, intron 2 of 4) intron (NM_177683, intron 2 of 4) 37561 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_139_661_0.763982930089028_9.75267887185173_26.6798473017594 chr17 87107399 87108632 + 26.6798473017594 NA 5' UTR (NM_019654, exon 1 of 3) 5' UTR (NM_019654, exon 1 of 3) 336 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding common_peak2_390_3041_0.381388608963443_11.7614987422062_26.6794213782644 chr1 6213578 6215838 + 26.6794213782644 NA promoter-TSS (NM_009826) promoter-TSS (NM_009826) 46 NM_009826 12421 Mm.293811 NM_009826 ENSMUSG00000025907 Rb1cc1 2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180 RB1-inducible coiled-coil 1 protein-coding common_peak2_213_1274_0.569301198795909_10.6009321311442_26.6650866810367 chr11 76845104 76847484 + 26.6650866810367 NA exon (NM_007754, exon 1 of 21) exon (NM_007754, exon 1 of 21) 714 NM_007754 12874 Mm.276736 NM_007754 ENSMUSG00000020841 Cpd AA960140|AW322530|D830034L15Rik carboxypeptidase D protein-coding common_peak1_213_1274_0.569301198795909_10.6009321311442_26.6650866810367 chr11 67558736 67561249 + 26.6650866810367 NA intron (NM_008088, intron 1 of 13) intron (NM_008088, intron 1 of 13) -26508 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_75_231_1.19560783064203_8.45578491044859_26.6557565801872 chr16 65562011 65563094 + 26.6557565801872 NA 5' UTR (NM_026879, exon 1 of 6) 5' UTR (NM_026879, exon 1 of 6) 145 NM_026879 68942 Mm.432944 NM_026879 ENSMUSG00000004843 Chmp2b 1190006E07Rik charged multivesicular body protein 2B protein-coding common_peak1_357_2687_0.403839473830365_11.5942371596939_26.6529138280973 chr3 135690210 135692329 + 26.6529138280973 NA 5' UTR (NM_008689, exon 1 of 25) 5' UTR (NM_008689, exon 1 of 25) 278 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_352_2634_0.407679964135385_11.5674272285923_26.652718366929 chr7 27165633 27167958 + 26.652718366929 NA promoter-TSS (NM_053208) promoter-TSS (NM_053208) 7 NM_053208 112406 Mm.29978 NM_053208 ENSMUSG00000058709 Egln2 0610011A13Rik|C85656|Hif-p4h-1|Ier4|Phd1|SM-20 egl-9 family hypoxia-inducible factor 2 protein-coding common_peak1_224_1373_0.550117935624852_10.6992252566305_26.6525932520535 chr4 40947164 40949342 + 26.6525932520535 NA promoter-TSS (NM_001171739) promoter-TSS (NM_001171739) 41 NM_009736 12017 Mm.688 NM_009736 ENSMUSG00000028416 Bag1 BAG-1|Rap46 BCL2-associated athanogene 1 protein-coding common_peak2_84_1057_-0.795482064261535_9.64938287998326_26.6498487947537 chr17 36110808 36112475 + 26.6498487947537 NA promoter-TSS (NM_001271005) promoter-TSS (NM_001271005) 35 NM_001271005 667803 Mm.477808 NM_001271005 H2-T-ps C920025E04Rik|H2-T11 histocompatibility 2, T region locus, pseudogene protein-coding common_peak2_590_5374_0.291192093414399_12.5376450860714_26.6411114906459 chr12 55487744 55494095 + 26.6411114906459 NA intron (NM_010907, intron 3 of 5) intron (NM_010907, intron 3 of 5) 1728 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak1_52_112_1.59556280302792_7.61796036392915_26.6367942951367 chr2 4560713 4561873 + 26.6367942951367 NA intron (NM_001177843, intron 12 of 23) intron (NM_001177843, intron 12 of 23) 1539 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_144_700_0.743498267380266_9.82501976770076_26.6200104561608 chr9 108783232 108784806 + 26.6200104561608 NA Intergenic Intergenic -11975 NM_029634 76500 Mm.276336 NM_029634 ENSMUSG00000032599 Ip6k2 1500005N04Rik|AW050208|Ihpk2 inositol hexaphosphate kinase 2 protein-coding common_peak2_153_770_0.712746802044387_9.94696045093723_26.6163716018192 chr11 73176220 73177950 + 26.6163716018192 NA promoter-TSS (NM_001168470) promoter-TSS (NM_001168470) 2 NM_029564 76281 Mm.371656 NM_029564 ENSMUSG00000040158 Tax1bp3 1300011C24Rik|TIP-1 Tax1 (human T cell leukemia virus type I) binding protein 3 protein-coding common_peak1_117_1444_-0.66471506115986_10.1644962468081_26.6130452777763 chr3 57735298 57736901 + 26.6130452777763 NA promoter-TSS (NM_001113413) promoter-TSS (NM_001113413) 37 NR_130743 24017 Mm.274360 NM_011883 ENSMUSG00000036503 Rnf13 2010001H16Rik|Rzf ring finger protein 13 protein-coding common_peak2_59_771_-0.95718829348402_9.11386289052607_26.6023195412825 chr19 41328102 41330119 + 26.6023195412825 NA intron (NM_031376, intron 4 of 16) intron (NM_031376, intron 4 of 16) 55960 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak2_118_508_0.855550524163949_9.41929710815767_26.5937241087256 chr2 151740341 151742148 + 26.5937241087256 NA promoter-TSS (NM_212446) promoter-TSS (NM_212446) 66 NM_212446 228769 Mm.146984 NM_144889 ENSMUSG00000032869 Psmf1 AW048666|BC012260|PI31 proteasome (prosome, macropain) inhibitor subunit 1 protein-coding common_peak1_95_1184_-0.743671253320814_9.83883571712521_26.5869619939193 chr17 35121380 35122290 + 26.5869619939193 NA promoter-TSS (NM_009975) promoter-TSS (NM_009975) 218 NM_001303446 13001 Mm.378901 NM_009975 ENSMUSG00000024387 Csnk2b CK II beta casein kinase 2, beta polypeptide protein-coding common_peak1_39_547_-1.18028554414339_8.50788931088883_26.5823271139636 chr14 54518959 54519798 + 26.5823271139636 NA Intergenic Intergenic -1908 NM_001313907 27374 Mm.196585 NM_013768 ENSMUSG00000023110 Prmt5 Jbp1|Skb1 protein arginine N-methyltransferase 5 protein-coding common_peak1_116_494_0.865793250794173_9.38418134036406_26.5762696448446 chr2 151740337 151741862 + 26.5762696448446 NA exon (NM_212446, exon 1 of 7) exon (NM_212446, exon 1 of 7) 211 NM_212446 228769 Mm.146984 NM_144889 ENSMUSG00000032869 Psmf1 AW048666|BC012260|PI31 proteasome (prosome, macropain) inhibitor subunit 1 protein-coding common_peak1_717_6990_0.256422290792866_12.8994942650374_26.5545787295251 chr10 80031137 80035079 + 26.5545787295251 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) 6551 NM_025554 66420 Mm.18579 NM_025554 ENSMUSG00000004667 Polr2e 2410021N14Rik|25kDa|AW208866|RPB5|XAP4 polymerase (RNA) II (DNA directed) polypeptide E protein-coding common_peak1_110_1360_-0.686533184139298_10.0671847594343_26.5476920671134 chr9 41072898 41074215 + 26.5476920671134 NA intron (NM_176860, intron 1 of 13) MIR3|SINE|MIR -68928 NM_019465 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak2_200_2464_-0.492693714962268_11.0210250737841_26.5369926358939 chr11 33937427 33940747 + 26.5369926358939 NA intron (NM_001190886, intron 1 of 7) intron (NM_001190886, intron 1 of 7) -23926 NM_031169 16533 Mm.6206 NM_031169 ENSMUSG00000020155 Kcnmb1 BKbeta1 potassium large conductance calcium-activated channel, subfamily M, beta member 1 protein-coding unique_peak1_53_117_1.56617682866411_7.6657314636939_26.5369906305939 chr17 44689896 44691129 + 26.5369906305939 NA intron (NR_073392, intron 4 of 7) intron (NR_073392, intron 4 of 7) 45664 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_109_1347_-0.688701451609587_10.0522540553771_26.517804854963 chr7 4460619 4461620 + 26.517804854963 NA Intergenic Intergenic -3616 NM_026146 67425 Mm.360392 NM_026146 ENSMUSG00000006154 Eps8l1 2310051G19Rik|4632407K17Rik|AW060268|DRC3|EPS8R1 EPS8-like 1 protein-coding common_peak1_134_1646_-0.61531168600844_10.3779689967221_26.514886707442 chr10 81433171 81434975 + 26.514886707442 NA Intergenic Intergenic -6900 NM_026756 18029 Mm.426936 NM_008688 ENSMUSG00000055053 Nfic 1110019L22Rik|1500041O16Rik|AA589446|AI746521|NF1-C nuclear factor I/C protein-coding common_peak2_82_1032_-0.803118669696712_9.6110652040167_26.5139364924748 chr3 146330892 146333975 + 26.5139364924748 NA Intergenic MTD|LTR|ERVL-MaLR 46511 NR_033542 100038607 Mm.365888 NR_033542 ENSMUSG00000105602 Gm10636 ENSMUSG00000074175 predicted gene 10636 ncRNA common_peak1_45_82_1.79003368393294_7.2700562733134_26.4932095411005 chr3 67429964 67430803 + 26.4932095411005 NA intron (NM_138591, intron 1 of 17) CpG 268 NM_138591 28030 Mm.122466 NM_138591 ENSMUSG00000027774 Gfm1 AW545374|D3Wsu133e|Gfm G elongation factor, mitochondrial 1 protein-coding common_peak2_307_2172_0.444473703964496_11.3077093111635_26.4930619030146 chr5 139790664 139794810 + 26.4930619030146 NA intron (NM_010757, intron 1 of 2) B1F|SINE|Alu 1201 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak1_126_1550_-0.636772276862045_10.2805968326051_26.475739822115 chr4 148139562 148141151 + 26.475739822115 NA promoter-TSS (NM_027985) promoter-TSS (NM_027985) -134 NM_027985 71890 Mm.9648 NM_027985 ENSMUSG00000029003 Mad2l2 2310033C13Rik|G1-453-4|MAD2B|REV7|repro22 MAD2 mitotic arrest deficient-like 2 protein-coding common_peak1_224_1375_0.548019469740854_10.7002744895725_26.4712527372286 chr9 72110773 72112538 + 26.4712527372286 NA promoter-TSS (NM_001253862) promoter-TSS (NM_001253862) 164 NM_011544 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding unique_peak1_43_74_1.85759136338443_7.15761437218809_26.4629674704951 chr8 69957705 69958816 + 26.4629674704951 NA intron (NM_001286450, intron 1 of 12) intron (NM_001286450, intron 1 of 12) 16123 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak2_483_4094_0.330143730479788_12.1647196017683_26.4596538745654 chr11 107455957 107461886 + 26.4596538745654 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 11799 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_99_1229_-0.725202785717507_9.90184120736785_26.4570003517115 chr17 6960351 6962172 + 26.4570003517115 NA promoter-TSS (NM_147155) promoter-TSS (NM_147155) -105 NM_147155 380608 Mm.371734 NM_147155 ENSMUSG00000052031 Tagap1 2610315E15Rik|AA415005|FKSG15 T cell activation GTPase activating protein 1 protein-coding common_peak1_72_917_-0.860031317028179_9.41233468489972_26.4489833359199 chr1 97580391 97581376 + 26.4489833359199 NA Intergenic Intergenic 81135 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak1_66_848_-0.899077043403315_9.28008222185138_26.4454088650133 chr7 133636857 133637701 + 26.4454088650133 NA promoter-TSS (NM_178115) promoter-TSS (NM_178115) -396 NM_178115 214764 Mm.174044 NM_145995 ENSMUSG00000039990 Edrf1 2700050L05Rik|AU022667|AW558805 erythroid differentiation regulatory factor 1 protein-coding common_peak2_204_1197_0.583136659154961_10.5179805223663_26.430093176274 chr1 191223640 191225889 + 26.430093176274 NA Intergenic CpG -41431 NM_007498 11910 Mm.2706 NM_007498 ENSMUSG00000026628 Atf3 LRG-21 activating transcription factor 3 protein-coding unique_peak2_6_179_-2.65851296868446_6.16259661198744_26.4283299059883 chr17 88042008 88043228 + 26.4283299059883 NA intron (NM_001081034, intron 1 of 22) intron (NM_001081034, intron 1 of 22) 22667 NM_001081034 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding common_peak2_77_974_-0.829702647842755_9.51440708471559_26.3994017139865 chr9 111210852 111214023 + 26.3994017139865 NA intron (NM_001164838, intron 9 of 14) intron (NM_001164838, intron 9 of 14) 59171 NM_026810 17350 Mm.486383 NM_026810 ENSMUSG00000032498 Mlh1 1110035C23Rik|AI317206|AI325952|AI561766 mutL homolog 1 protein-coding common_peak1_215_1295_0.562194497514039_10.6209472516416_26.3920746280105 chr2 167588504 167590096 + 26.3920746280105 NA Intergenic Intergenic 42705 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak1_19_324_-1.65316168028504_7.5177150677733_26.3869529600738 chr5 140569721 140570169 + 26.3869529600738 NA Intergenic PB1D7|SINE|Alu -4878 NM_030022 77998 Mm.160040 NM_030022 ENSMUSG00000036586 Grifin E130101O17Rik galectin-related inter-fiber protein protein-coding unique_peak2_29_435_-1.35952789217922_8.08842037868732_26.3813191172027 chr9 41003452 41005466 + 26.3813191172027 NA intron (NM_001281954, intron 1 of 9) intron (NM_001281954, intron 1 of 9) 169 NM_001281954 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak2_177_2172_-0.525841779230738_10.8225515695659_26.3738638662745 chr5 105498482 105502417 + 26.3738638662745 NA Intergenic Intergenic -19022 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak1_30_446_-1.33744881644901_8.13540661295881_26.3712793573167 chr7 43441341 43442023 + 26.3712793573167 NA exon (NM_028849, exon 2 of 5) exon (NM_028849, exon 2 of 5) 866 NM_028849 74276 Mm.159153 NM_028849 ENSMUSG00000038973 Cldnd2 1700071E18Rik claudin domain containing 2 protein-coding common_peak2_42_578_-1.13169236773529_8.61157335412159_26.3532326027326 chr3 106448552 106450487 + 26.3532326027326 NA Intergenic Intergenic -32912 NM_001093754 72121 Mm.14816 NM_028110 ENSMUSG00000027901 Dennd2d 2010308M01Rik|AI451421 DENN/MADD domain containing 2D protein-coding common_peak1_80_262_1.12742309370058_8.60263053614259_26.3458770483685 chr5 65107446 65108112 + 26.3458770483685 NA Intergenic CpG -23452 NM_175174 71778 Mm.10281 NM_175174 ENSMUSG00000054920 Klhl5 1300013C10Rik kelch-like 5 protein-coding common_peak2_72_916_-0.858458897209426_9.41154847499034_26.3388731586251 chr6 57690944 57692582 + 26.3388731586251 NA intron (NM_025574, intron 1 of 1) CpG 315 NM_025574 66459 Mm.44201 NM_025574 ENSMUSG00000043162 Pyurf 2610022G08Rik|AI847956|Prey Pigy upstream reading frame protein-coding common_peak2_35_500_-1.23736912013618_8.34998223312711_26.3368361238815 chr9 44360781 44362373 + 26.3368361238815 NA promoter-TSS (NM_027889) promoter-TSS (NM_027889) 93 NM_027889 71732 Mm.295013 NM_027889 ENSMUSG00000032127 Vps11 1200011A11Rik VPS11, CORVET/HOPS core subunit protein-coding common_peak2_162_1986_-0.5525317133283_10.6801103005855_26.335464312648 chr11 96828785 96831056 + 26.335464312648 NA promoter-TSS (NM_008686) promoter-TSS (NM_008686) 48 NM_008686 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak2_96_1193_-0.736248757901397_9.85346274231411_26.3338741832388 chr7 143829151 143830898 + 26.3338741832388 NA intron (NM_007856, intron 1 of 8) CpG 6857 NM_007856 13360 Mm.249342 NM_007856 ENSMUSG00000058454 Dhcr7 AA409147 7-dehydrocholesterol reductase protein-coding common_peak2_1154_13127_0.188602120290957_13.7746605836592_26.3230601153518 chr7 30408229 30425054 + 26.3230601153518 NA intron (NM_011662, intron 4 of 4) B1_Mur4|SINE|Alu 2853 NM_011662 22177 Mm.46301 NM_011662 ENSMUSG00000030579 Tyrobp DAP12|KARAP|Ly83 TYRO protein tyrosine kinase binding protein protein-coding unique_peak2_49_656_-1.04712205699959_8.83618853182254_26.3085645580926 chr2 163802993 163805083 + 26.3085645580926 NA Intergenic Intergenic -16796 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak1_25_391_-1.45928859947428_7.88506554437807_26.2981819262685 chr17 34850445 34850883 + 26.2981819262685 NA promoter-TSS (NM_021337) promoter-TSS (NM_021337) 273 NM_001045864 27632 Mm.653 NM_138580 ENSMUSG00000024369 Nelfe D17H6S45|NELF-E|RD|Rdbp negative elongation factor complex member E, Rdbp protein-coding common_peak2_139_664_0.757459806507693_9.7559404336424_26.2904849148667 chr4 136469225 136470904 + 26.2904849148667 NA intron (NM_024452, intron 1 of 4) CpG 303 NM_024452 269593 Mm.485824 NM_024452 ENSMUSG00000001089 Luzp1 2700072H04Rik|AI266952|Luzp|mFLJ00226 leucine zipper protein 1 protein-coding common_peak2_148_733_0.725288749264408_9.88228062747542_26.2778076965507 chr15 99331823 99334297 + 26.2778076965507 NA intron (NM_001310623, intron 4 of 24) intron (NM_001310623, intron 4 of 24) 37422 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_33_478_-1.27373327357565_8.26701520894835_26.2595828603455-2 chr5 107987339 107988176 + 26.2595828603455 NA promoter-TSS (NM_026062) promoter-TSS (NM_026062) -680 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_33_478_-1.27373327357565_8.26701520894835_26.2595828603455 chr19 57994740 57995427 + 26.2595828603455 NA intron (NM_181415, intron 27 of 28) intron (NM_181415, intron 27 of 28) -56084 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA common_peak2_563_5051_0.29785130216446_12.4515645748698_26.2496072609317 chr12 51827420 51831444 + 26.2496072609317 NA 5' UTR (NM_144788, exon 1 of 43) 5' UTR (NM_144788, exon 1 of 43) 104 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak1_28_423_-1.37925714005063_8.03829188453788_26.245159385644 chr1 127625797 127626497 + 26.245159385644 NA intron (NM_028135, intron 2 of 7) B4A|SINE|B4 51874 NM_028135 72160 Mm.281287 NM_028135 ENSMUSG00000026347 Tmem163 2610024A01Rik|SV31 transmembrane protein 163 protein-coding common_peak1_47_91_1.71682582322144_7.38197486766773_26.2444094683449-2 chr5 148397424 148398407 + 26.2444094683449 NA intron (NM_007513, intron 1 of 12) intron (NM_007513, intron 1 of 12) 1989 NM_007513 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_47_91_1.71682582322144_7.38197486766773_26.2444094683449 chr4 3953693 3954582 + 26.2444094683449 NA Intergenic Intergenic 14713 NR_104356 66433 Mm.27406 NM_181391 ENSMUSG00000042198 Chchd7 1810049H20Rik coiled-coil-helix-coiled-coil-helix domain containing 7 protein-coding common_peak1_84_1053_-0.790017303784722_9.64665049974485_26.2383765476896 chr4 141544989 141545882 + 26.2383765476896 NA promoter-TSS (NR_030695) promoter-TSS (NR_030695) -727 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak1_323_2339_0.427273890894824_11.4059297599182_26.2369882367276 chr2 91182018 91184688 + 26.2369882367276 NA promoter-TSS (NM_001177719) promoter-TSS (NM_001177719) -306 NM_145527 228355 Mm.36410 NM_145527 ENSMUSG00000040687 Madd 9630059K23Rik|IG20 MAP-kinase activating death domain protein-coding common_peak1_32_467_-1.29304477192253_8.22384233362214_26.2344855132715 chr13 101718994 101719727 + 26.2344855132715 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) -26730 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_37_522_-1.2036906216637_8.42882182541509_26.2274874411053 chrX 38634559 38635145 + 26.2274874411053 NA intron (NM_021550, intron 1 of 1) intron (NM_021550, intron 1 of 1) 291 NM_021550 59048 Mm.441410 NM_021550 ENSMUSG00000048970 C1galt1c1 1500002I11Rik|AB030184|C1GalT2|C81205|Cosmc C1GALT1-specific chaperone 1 protein-coding common_peak1_161_837_0.682147960479883_10.0518804139393_26.2201049874453 chr2 101761967 101764008 + 26.2201049874453 NA intron (NM_175181, intron 3 of 8) intron (NM_175181, intron 3 of 8) 34720 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak2_316_2267_0.433710033316622_11.3640599416005_26.2117301184006 chr11 69899911 69902794 + 26.2117301184006 NA promoter-TSS (NM_001013414) promoter-TSS (NM_001013414) -366 NM_027419 70419 Mm.272859 NM_027419 ENSMUSG00000018570 2810408A11Rik 1700019L01Rik|4930470J18Rik RIKEN cDNA 2810408A11 gene protein-coding common_peak1_189_2320_-0.505448705882914_10.927806454403_26.193961100293 chr2 3727067 3729426 + 26.193961100293 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 14788 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_268_1791_0.483004199511404_11.0488570218133_26.1893343002385 chr5 96996313 96998970 + 26.1893343002385 NA promoter-TSS (NM_080708) promoter-TSS (NM_080708) -48 NM_080708 140780 Mm.281490 NM_080708 ENSMUSG00000034663 Bmp2k 4933417M22Rik|AA673486|AV128808|BIKE BMP2 inducible kinase protein-coding common_peak2_164_861_0.673881475450102_10.0884847968142_26.1890806371924 chr1 136624182 136625968 + 26.1890806371924 NA intron (NM_177643, intron 1 of 1) (CGGGG)n|Simple_repeat|Simple_repeat 174 NM_001160251 226442 Mm.62521 NM_177643 ENSMUSG00000041483 Zfp281 Znf281 zinc finger protein 281 protein-coding common_peak2_81_1017_-0.803466269823913_9.58978871116374_26.1872273554904 chr15 36781086 36784512 + 26.1872273554904 NA intron (NM_001253805, intron 2 of 5) intron (NM_001253805, intron 2 of 5) 8133 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak2_230_1433_0.535026748224446_10.7533426828141_26.1779321720168 chr12 100975869 100980795 + 26.1779321720168 NA intron (NM_026681, intron 4 of 29) intron (NM_026681, intron 4 of 29) 43436 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak1_115_490_0.862308722570589_9.37073357559999_26.174870909216 chr3 159839446 159841382 + 26.174870909216 NA intron (NM_026582, intron 1 of 11) intron (NM_026582, intron 1 of 11) 719 NM_026582 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|Gpr177 wntless homolog (Drosophila) protein-coding common_peak1_271_1820_0.479470298742758_11.0702503563482_26.1719426980897 chr11 11719208 11723592 + 26.1719426980897 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 31223 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_840_8643_0.230039253785884_13.1925029837525_26.1699059253969 chr19 53459168 53468344 + 26.1699059253969 NA intron (NR_028427, intron 1 of 9) RSINE1|SINE|B4 1040 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_351_2631_0.404303213704134_11.5640953805873_26.1666204758798 chr9 65345583 65347542 + 26.1666204758798 NA exon (NM_016688, exon 1 of 5) exon (NM_016688, exon 1 of 5) 494 NM_016688 50996 Mm.29193 NM_016688 ENSMUSG00000041837 Pdcd7 C80112|ES18 programmed cell death 7 protein-coding common_peak1_38_532_-1.18504827315132_8.46546758618352_26.1522681506384 chr13 21809689 21810329 + 26.1522681506384 NA promoter-TSS (NM_001177544).2 promoter-TSS (NM_001177544).2 190 NM_001313878 665622 Mm.471247 NM_001110555 ENSMUSG00000069303 Hist1h2br Gm11277|OTTMUSG00000000449 histone cluster 1 H2br protein-coding common_peak1_54_710_-0.992414731233501_8.97749838400266_26.1445805858189 chr7 127406275 127407100 + 26.1445805858189 NA 5' UTR (NM_146203, exon 1 of 3) 5' UTR (NM_146203, exon 1 of 3) 135 NM_146203 233893 Mm.297097 NM_146203 ENSMUSG00000045757 Zfp764 8030466O12Rik zinc finger protein 764 protein-coding common_peak1_54_710_-0.992414731233501_8.97749838400266_26.1445805858189-2 chrX 136992719 136993691 + 26.1445805858189 NA promoter-TSS (NM_001114179) promoter-TSS (NM_001114179) 50 NM_001035509 66995 Mm.440155 NM_025893 ENSMUSG00000031428 Zcchc18 1500031H04Rik|Sizn2 zinc finger, CCHC domain containing 18 protein-coding common_peak2_729_7157_0.251696096033921_12.9311888764333_26.1385715041844 chr2 128424236 128432105 + 26.1385715041844 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 1181 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_87_305_1.05563452237401_8.78520510387966_26.1325968235828 chr18 88893288 88894663 + 26.1325968235828 NA intron (NM_018821, intron 1 of 2) CpG 232 NM_018821 54607 Mm.91920 NM_018821 ENSMUSG00000056153 Socs6 1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4 suppressor of cytokine signaling 6 protein-coding common_peak1_116_497_0.857076033693064_9.38853994891461_26.1284334188043 chr17 26502167 26503202 + 26.1284334188043 NA Intergenic Intergenic 5788 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_150_1835_-0.573829958428256_10.5554353641997_26.1184860048099 chr8 105937125 105938574 + 26.1184860048099 NA intron (NM_013640, intron 1 of 7) intron (NM_013640, intron 1 of 7) 543 NM_013640 19171 Mm.787 NM_013640 ENSMUSG00000031897 Psmb10 Mecl-1|Mecl1 proteasome (prosome, macropain) subunit, beta type 10 protein-coding common_peak1_41_67_1.91662411373452_7.0457748981176_26.1179897609496 chr15 99646577 99647368 + 26.1179897609496 NA intron (NM_012025, intron 1 of 17) B1_Mur1|SINE|Alu 4684 NM_001253808 26934 Mm.273804 NM_012025 ENSMUSG00000023015 Racgap1 AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478 Rac GTPase-activating protein 1 protein-coding common_peak2_244_1563_0.513957026481652_10.8680033105482_26.1150253436985 chr8 36094192 36097884 + 26.1150253436985 NA intron (NM_172911, intron 1 of 5) intron (NM_172911, intron 1 of 5) 1210 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak2_100_388_0.953221848619265_9.08023726929583_26.1066613767635 chr6 128606326 128608789 + 26.1066613767635 NA Intergenic MTC|LTR|ERVL-MaLR 15377 NM_001159902 17057 Mm.16729 NM_010737 ENSMUSG00000030361 Klrb1a Ly55a|NKR-P1.7|NKR-P1A|NKRP12|Nkrp1-a|Nkrp1a|ly-55A killer cell lectin-like receptor subfamily B member 1A protein-coding common_peak1_322_2331_0.426744372790822_11.4007242595959_26.0745468377628 chr15 78771123 78773790 + 26.0745468377628 NA intron (NM_008595, intron 1 of 7) intron (NM_008595, intron 1 of 7) 989 NM_008595 17305 Mm.149235 NM_008595 ENSMUSG00000018169 Mfng AW546563 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding unique_peak2_8_200_-2.37297864049262_6.46456237093262_26.0676194395802 chr4 95105847 95106674 + 26.0676194395802 NA Intergenic Intergenic -54038 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_94_1167_-0.741354768604806_9.81914717457762_26.0631176158733 chr4 101297573 101300441 + 26.0631176158733 NA Intergenic (TTTG)n|Simple_repeat|Simple_repeat -33725 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_136_1665_-0.605835128830689_10.3992551209502_26.047918033615 chr1 75478762 75479749 + 26.047918033615 NA promoter-TSS (NM_177056) promoter-TSS (NM_177056) 216 NM_001001565 74241 Mm.260577 NM_001001565 ENSMUSG00000032997 Chpf 1700028N03Rik|AI414328|D1Bwg1363e chondroitin polymerizing factor protein-coding common_peak2_385_2997_0.379632935684754_11.7396011357902_26.0474674558586 chr9 32591785 32596110 + 26.0474674558586 NA Intergenic Intergenic -52495 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak2_162_1982_-0.549624518307478_10.6786567030751_26.0356435252765 chr7 127511646 127514025 + 26.0356435252765 NA promoter-TSS (NR_024331) promoter-TSS (NR_024331) 34 NR_024331 629159 Mm.256720 NR_024331 ENSMUSG00000101225 1700008J07Rik AW048743 RIKEN cDNA 1700008J07 gene ncRNA common_peak2_283_1939_0.464543231145237_11.1541125526471_26.0326179699628 chr5 9099891 9102298 + 26.0326179699628 NA intron (NM_001081029, intron 1 of 4) CpG 357 NM_001081029 652925 Mm.439954 NM_001081029 ENSMUSG00000079659 Tmem243 4930420K17Rik|E030031F02Rik transmembrane protein 243, mitochondrial protein-coding unique_peak2_10_223_-2.17416949055001_6.7202701767826_26.0303008463452 chr12 11283196 11284779 + 26.0303008463452 NA intron (NM_025695, intron 8 of 26) intron (NM_025695, intron 8 of 26) -15900 NR_106136 102465775 NR_106136 ENSMUSG00000098879 Mir7675 Gm27965|mmu-mir-7675 microRNA 7675 ncRNA common_peak1_532_4681_0.307538961028248_12.3466786996261_26.02930836958 chr1 88698390 88703175 + 26.02930836958 NA 3' UTR (NM_177305, exon 1 of 1) 3' UTR (NM_177305, exon 1 of 1) 1409 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding unique_peak1_32_35_2.40739494621857_6.3736224745516_26.0250564649867 chr5 21378910 21379519 + 26.0250564649867 NA TTS (NM_008013) TTS (NM_008013) 6541 NM_008013 14190 Mm.292100 NM_008013 ENSMUSG00000039899 Fgl2 AI385601|musfiblp fibrinogen-like protein 2 protein-coding common_peak2_271_1822_0.477886659680461_11.0710421758794_26.0156495664293 chr12 86241119 86243452 + 26.0156495664293 NA intron (NM_027405, intron 1 of 9) intron (NM_027405, intron 1 of 9) 407 NM_027405 70373 Mm.252967 NM_027405 ENSMUSG00000021254 Gpatch2l 1700020O03Rik|4732487G21Rik|A630090I05Rik|Kiaa1152 G patch domain containing 2 like protein-coding common_peak1_69_878_-0.871661329433515_9.34388869042665_26.0058554285822 chr6 57691175 57692337 + 26.0058554285822 NA intron (NM_025574, intron 1 of 1) CpG 322 NM_025574 66459 Mm.44201 NM_025574 ENSMUSG00000043162 Pyurf 2610022G08Rik|AI847956|Prey Pigy upstream reading frame protein-coding common_peak1_57_138_1.45633455297542_7.84710834921122_25.9994686777023 chr7 39449212 39450169 + 25.9994686777023 NA intron (NM_001243021, intron 1 of 5) intron (NM_001243021, intron 1 of 5) 172 NM_001243021 233147 Mm.148946 NM_001243021 ENSMUSG00000030424 Zfp939 9430025M13Rik zinc finger protein 939 protein-coding common_peak1_82_1027_-0.796118680025531_9.60756520918111_25.9952407983105 chr7 27178240 27179167 + 25.9952407983105 NA intron (NM_029391, intron 1 of 7) CpG 180 NM_029391 19342 Mm.482114 NM_029391 ENSMUSG00000053291 Rab4b 1500031G17Rik RAB4B, member RAS oncogene family protein-coding common_peak2_252_1640_0.501482693707649_10.9311008703675_25.9897293157991 chr6 18846749 18850013 + 25.9897293157991 NA promoter-TSS (NM_133939) promoter-TSS (NM_133939) -254 NM_133939 76522 Mm.275158 NM_133939 ENSMUSG00000044155 Lsm8 2010003I05Rik|AW214405|Naa38 LSM8 homolog, U6 small nuclear RNA associated protein-coding common_peak1_22_356_-1.54131945993559_7.7091205340613_25.9882149785248 chr9 124120984 124121472 + 25.9882149785248 NA promoter-TSS (NM_009917) promoter-TSS (NM_009917) -315 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak1_423_3418_0.356219991568786_11.9174687032178_25.9858345846798 chr7 127133277 127138738 + 25.9858345846798 NA 3' UTR (NM_009259, exon 2 of 2) 3' UTR (NM_009259, exon 2 of 2) 1816 NR_110337 20737 Mm.283714 NM_009259 ENSMUSG00000051457 Spn A630014B01Rik|Cd43|Galgp|Ly-48|Ly48 sialophorin protein-coding common_peak2_64_822_-0.90783410008873_9.23083157037726_25.9646887635004 chr7 58447986 58449831 + 25.9646887635004 NA Intergenic RLTR14_RN|LTR|ERV1 -209294 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_27_410_-1.39642983366376_7.9847796668498_25.9587260873034 chr11 101627931 101628495 + 25.9587260873034 NA intron (NM_025654, intron 1 of 6) intron (NM_025654, intron 1 of 6) 264 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding common_peak1_203_1193_0.579308278235363_10.5112412603825_25.9481981143003 chr2 181482563 181484747 + 25.9481981143003 NA Intergenic Intergenic -9551 NM_183181 241850 Mm.87455 NM_183181 ENSMUSG00000055882 Abhd16b 1700095H12 abhydrolase domain containing 16B protein-coding common_peak1_138_659_0.755662566546786_9.74415349751921_25.9422148981369 chr9 108783521 108784664 + 25.9422148981369 NA Intergenic Intergenic -11902 NM_029634 76500 Mm.276336 NM_029634 ENSMUSG00000032599 Ip6k2 1500005N04Rik|AW050208|Ihpk2 inositol hexaphosphate kinase 2 protein-coding common_peak1_199_1158_0.587187274688981_10.472258488351_25.9345834019425 chr4 132073804 132075560 + 25.9345834019425 NA intron (NM_001128607, intron 1 of 17) CpG 631 NM_001128607 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding common_peak1_263_3268_-0.417476780547318_11.4658952714936_25.9334276020621 chr6 129620202 129624010 + 25.9334276020621 NA intron (NM_001286018, intron 1 of 7) intron (NM_001286018, intron 1 of 7) 577 NM_033078 27007 Mm.8217 NM_033078 ENSMUSG00000030149 Klrk1 D6H12S2489E|NKG2-D|Nkg2d killer cell lectin-like receptor subfamily K, member 1 protein-coding common_peak1_324_2353_0.42412150217277_11.4129593561248_25.9264284567157 chr9 41219832 41223581 + 25.9264284567157 NA Intergenic Lx8|LINE|L1 15551 NR_040392 78500 Mm.275715 NR_040392 ENSMUSG00000100837 1700063D05Rik - RIKEN cDNA 1700063D05 gene ncRNA common_peak2_72_912_-0.852152023598594_9.40839503818492_25.9001225825292 chr7 30279664 30281515 + 25.9001225825292 NA promoter-TSS (NM_146186) promoter-TSS (NM_146186) -168 NM_146186 233064 Mm.271677 NM_146186 ENSMUSG00000037020 Wdr62 2310038K02Rik WD repeat domain 62 protein-coding common_peak2_537_4744_0.304779060846892_12.3645819023319_25.8960710380759 chr10 99260727 99265213 + 25.8960710380759 NA promoter-TSS (NM_026268) promoter-TSS (NM_026268) -261 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak2_86_300_1.05917815390615_8.76320875371278_25.8960469409839 chr4 145584722 145585907 + 25.8960469409839 NA Intergenic Intergenic -31832 NM_001205101 433801 Mm.276881 NM_001013808 ENSMUSG00000078502 Gm13212 OTTMUSG00000010965 predicted gene 13212 protein-coding common_peak1_161_1968_-0.550293001722318_10.6681008950404_25.8926461682799 chr17 84956385 84957578 + 25.8926461682799 NA intron (NM_001159497, intron 1 of 5) intron (NM_001159497, intron 1 of 5) 240 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak1_140_1711_-0.594201382821844_10.4443662949902_25.8892776220735 chr6 48726754 48729208 + 25.8892776220735 NA Intergenic Intergenic 9360 NM_146167 231932 Mm.30479 NM_146167 ENSMUSG00000043931 Gimap7 IAN7|Ian3 GTPase, IMAP family member 7 protein-coding common_peak1_175_2140_-0.52443440413249_10.8018518783193_25.8836048802536 chr9 56505939 56507980 + 25.8836048802536 NA Intergenic Intergenic 88113 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak2_478_4047_0.328421533014128_12.1472043412014_25.8832873111772 chr1 54921647 54926999 + 25.8832873111772 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 2064 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_68_866_-0.87729286297504_9.32124175173431_25.872002264628 chr10 42027915 42029140 + 25.872002264628 NA Intergenic ID_B1|SINE|B4 -10145 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak2_55_719_-0.978676035125392_9.00251507876698_25.8707710999582 chr19 31336635 31339266 + 25.8707710999582 NA intron (NM_011160, intron 2 of 17) intron (NM_011160, intron 2 of 17) -121554 NR_002849 78103 Mm.445198 NR_002849 8430431K14Rik - RIKEN cDNA 8430431K14 gene ncRNA common_peak1_689_6643_0.259476860349093_12.8275747881369_25.8661360297729 chr16 49853899 49857754 + 25.8661360297729 NA exon (NM_010581, exon 1 of 10) exon (NM_010581, exon 1 of 10) 172 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_201_2467_-0.485666174357606_11.0262935919706_25.8622760327547 chr18 10608790 10611136 + 25.8622760327547 NA intron (NM_001081222, intron 1 of 10) CpG 389 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding common_peak2_289_2001_0.456154953741251_11.1953037357066_25.8587587760259 chr14 25500655 25507453 + 25.8587587760259 NA intron (NM_001310666, intron 2 of 23) intron (NM_001310666, intron 2 of 23) -30385 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_265_3292_-0.414674172746631_11.477849710222_25.8519993057441 chr6 129649968 129662893 + 25.8519993057441 NA TTS (NM_001098669) TTS (NM_001098669) 4126 NM_010653 16642 Mm.347927 NM_010653 ENSMUSG00000052736 Klrc2 NKG2C killer cell lectin-like receptor subfamily C, member 2 protein-coding common_peak2_789_7961_0.237901833086644_13.0778660726347_25.8517203651089 chr10 19501188 19509063 + 25.8517203651089 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -86833 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_112_1375_-0.670745256529697_10.0908921264373_25.8501582442684 chr15 78983009 78984068 + 25.8501582442684 NA intron (NM_001024716, intron 1 of 13) intron (NM_001024716, intron 1 of 13) 482 NM_001024716 110253 Mm.123714 NM_138579 ENSMUSG00000033088 Triobp AI428493|EST478828|Tara|mKIAA1662 TRIO and F-actin binding protein protein-coding common_peak1_19_321_-1.63978265048384_7.5110255528727_25.8449745084702 chr3 135666423 135666935 + 25.8449745084702 NA intron (NM_008689, intron 3 of 24) intron (NM_008689, intron 3 of 24) 24868 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding unique_peak2_26_398_-1.41803736938275_7.93122625153097_25.8435867982315 chr19 40818093 40819994 + 25.8435867982315 NA Intergenic Intergenic -12236 NM_172839 240665 Mm.309 NM_172839 ENSMUSG00000025010 Ccnj D430039C20Rik cyclin J protein-coding common_peak2_797_8069_0.236294181836856_13.0965000490836_25.8431797229992 chr1 173429710 173442701 + 25.8431797229992 NA intron (NM_001013779, intron 2 of 8) intron (NM_001013779, intron 2 of 8) 15601 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_301_2121_0.443923755257142_11.2731708185433_25.8429556946648 chr3 9249903 9252108 + 25.8429556946648 NA 5' UTR (NM_177660, exon 1 of 6) 5' UTR (NM_177660, exon 1 of 6) 438 NM_177660 229055 Mm.103262 NM_177660 ENSMUSG00000069114 Zbtb10 4832414A18|AU021107|RINZF zinc finger and BTB domain containing 10 protein-coding common_peak1_125_1530_-0.63203709636165_10.264240019319_25.8339919875686 chr10 63243801 63244729 + 25.8339919875686 NA intron (NM_030114, intron 1 of 25) CpG 468 NM_026101 67345 Mm.234437 NM_026101 ENSMUSG00000020064 Herc4 1700056O17Rik|4921531D01Rik|9530080M15Rik|mKIAA1593 hect domain and RLD 4 protein-coding unique_peak1_39_60_1.98700920125425_6.92424193819001_25.8223855034098 chrX 164007906 164008802 + 25.8223855034098 NA intron (NM_181315, intron 2 of 7) intron (NM_181315, intron 2 of 7) 19656 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak2_68_196_1.26054350079042_8.25232356985159_25.8212035066977-2 chr13 104108819 104109699 + 25.8212035066977 NA promoter-TSS (NM_144838) promoter-TSS (NM_144838) 355 NM_029447 75805 Mm.127692 NM_029447 ENSMUSG00000021710 Nln 4930472G13Rik|C79345 neurolysin (metallopeptidase M3 family) protein-coding common_peak2_68_196_1.26054350079042_8.25232356985159_25.8212035066977 chr12 111943870 111945129 + 25.8212035066977 NA promoter-TSS (NR_029464) promoter-TSS (NR_029464) -17 NR_029464 77675 Mm.98331 NR_029464 5033406O09Rik 9130204G15Rik RIKEN cDNA 5033406O09 gene ncRNA common_peak2_256_1680_0.494497639920509_10.9623528291964_25.8163472165031 chr10 12866386 12869951 + 25.8163472165031 NA Intergenic Intergenic -6433 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_166_881_0.662111760130438_10.1156907256227_25.8145286517334 chr6 11925270 11926945 + 25.8145286517334 NA 5' UTR (NM_029404, exon 1 of 17) 5' UTR (NM_029404, exon 1 of 17) 226 NM_001168382 75725 Mm.212411 NM_029404 ENSMUSG00000029629 Phf14 1110001C23Rik|4932409F11Rik|5730446A07Rik|AA623952|AV297001|mKIAA0783 PHD finger protein 14 protein-coding common_peak2_79_991_-0.809837460383386_9.54927758019518_25.8144551233887 chr4 126196336 126199336 + 25.8144551233887 NA intron (NM_146153, intron 1 of 10) B1_Mur4|SINE|Alu 4874 NM_146153 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak2_195_1125_0.593109747203167_10.4335459856818_25.8129849221005 chr15 73742379 73745264 + 25.8129849221005 NA intron (NM_001166388, intron 1 of 5) intron (NM_001166388, intron 1 of 5) -4205 NM_008975 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak1_246_1586_0.507282705636541_10.8857277656535_25.8027414281347 chr6 71271589 71272920 + 25.8027414281347 NA TTS (NR_106192) TTS (NR_106192) 235 NM_145568 57896 Mm.250569 NM_145568 ENSMUSG00000053012 Krcc1 AA792894 lysine-rich coiled-coil 1 protein-coding common_peak1_45_84_1.75568217914216_7.28723202570878_25.797002311673 chr12 33315982 33316713 + 25.797002311673 NA intron (NM_001033436, intron 1 of 7) intron (NM_001033436, intron 1 of 7) 13832 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_363_2765_0.391984223942265_11.6295775531216_25.7856415246646 chr1 58391901 58394285 + 25.7856415246646 NA promoter-TSS (NM_025824) promoter-TSS (NM_025824) -43 NM_025824 66882 Mm.21848 NM_025824 ENSMUSG00000051223 Bzw1 1200015E15Rik|mKIAA0005 basic leucine zipper and W2 domains 1 protein-coding common_peak2_378_2926_0.381824329479254_11.7061191951484_25.7801104182029 chr10 88425176 88429822 + 25.7801104182029 NA intron (NM_001004164, intron 7 of 20) intron (NM_001004164, intron 7 of 20) -32088 NM_011517 20962 Mm.297977 NM_011517 ENSMUSG00000020059 Sycp3 Cor1|Scp3 synaptonemal complex protein 3 protein-coding common_peak1_32_464_-1.28376695833451_8.21920342682814_25.7793417827346 chr10 63429494 63430113 + 25.7793417827346 NA promoter-TSS (NM_177612) promoter-TSS (NM_177612) -295 NM_177612 216033 Mm.444692 NM_177612 ENSMUSG00000060843 Ctnna3 4930429L08Rik|4933408A16|Catna3|Vr22 catenin (cadherin associated protein), alpha 3 protein-coding common_peak1_94_1164_-0.737644449266432_9.81729201490843_25.7721781775358 chr17 26938409 26939693 + 25.7721781775358 NA non-coding (NR_104458, exon 2 of 6) non-coding (NR_104458, exon 2 of 6) 407 NR_104458 67675 Mm.439919 NM_026307 ENSMUSG00000024194 Cuta 0610039D01Rik|1810022E02Rik|1810060C03Rik|2700094G22Rik|AI326454 cutA divalent cation tolerance homolog protein-coding common_peak1_68_865_-0.87562789447993_9.32040926748676_25.759999001487 chr10 117063104 117063836 + 25.759999001487 NA intron (NM_007636, intron 1 of 15) CpG 344 NM_007636 12461 Mm.247788 NM_007636 ENSMUSG00000034024 Cct2 Cctb chaperonin containing Tcp1, subunit 2 (beta) protein-coding common_peak2_352_2648_0.400035082290341_11.5712496695148_25.7414952097326 chr9 65345454 65347510 + 25.7414952097326 NA exon (NM_016688, exon 1 of 5) exon (NM_016688, exon 1 of 5) 414 NM_016688 50996 Mm.29193 NM_016688 ENSMUSG00000041837 Pdcd7 C80112|ES18 programmed cell death 7 protein-coding common_peak2_95_358_0.979160056641756_8.97742006214393_25.7234951562018 chr14 57907927 57909293 + 25.7234951562018 NA Intergenic Intergenic -18348 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|ENSMUSG00000055956|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak2_305_2163_0.43893282064028_11.298951194147_25.7234433343978 chr16 3742679 3745514 + 25.7234433343978 NA promoter-TSS (NM_148924) promoter-TSS (NM_148924) -3 NM_148924 74120 Mm.29081 NM_148924 ENSMUSG00000022529 Zfp263 1200014J04Rik|AI326880|AU020888|NT2|mFPM315 zinc finger protein 263 protein-coding common_peak1_13_255_-1.94004756116843_7.02997621941578_25.7178557050222 chr16 36986002 36986411 + 25.7178557050222 NA Intergenic ORR1C2|LTR|ERVL-MaLR -7070 NM_001037321 207215 Mm.211899 NM_001037321 ENSMUSG00000047746 Fbxo40 9830003A13Rik|mKIAA1195 F-box protein 40 protein-coding common_peak1_414_3322_0.359340878354637_11.8779410168694_25.7164616249114 chr17 34185989 34188750 + 25.7164616249114 NA promoter-TSS (NM_001161730) promoter-TSS (NM_001161730) -39 NM_013585 16912 Mm.390983 NM_013585 ENSMUSG00000096727 Psmb9 Lmp-2|Lmp2 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) protein-coding common_peak1_126_1541_-0.62837635574099_10.2763988720445_25.7137379380126 chr19 8928717 8930450 + 25.7137379380126 NA promoter-TSS (NM_009073) promoter-TSS (NM_009073) -111 NM_144872 225898 Mm.31008 NM_144872 ENSMUSG00000071647 Eml3 BC022146 echinoderm microtubule associated protein like 3 protein-coding common_peak2_97_371_0.96432973698901_9.02132367960253_25.7019718850431 chr14 25636312 25638410 + 25.7019718850431 NA intron (NM_001310666, intron 7 of 23) intron (NM_001310666, intron 7 of 23) 33848 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak2_121_1481_-0.642197970072505_10.2122307472696_25.6911812009689 chr8 70896594 70898481 + 25.6911812009689 NA promoter-TSS (NM_029751) promoter-TSS (NM_029751) -94 NM_029751 76808 Mm.379251 NM_029751 ENSMUSG00000045128 Rpl18a 2510019J09Rik ribosomal protein L18A protein-coding common_peak1_44_595_-1.09298988289753_8.6726735790134_25.6814214053361 chrX 38600610 38601367 + 25.6814214053361 NA intron (NM_026902, intron 1 of 5) intron (NM_026902, intron 1 of 5) 330 NM_026902 68995 Mm.262453 NM_026902 ENSMUSG00000000355 Mcts1 1500019M23Rik|MCT-1 malignant T cell amplified sequence 1 protein-coding unique_peak2_26_397_-1.41441705370405_7.92941609369162_25.6808098897966 chr9 33079717 33081282 + 25.6808098897966 NA Intergenic Intergenic -151533 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak2_170_915_0.649429447606515_10.1639185119002_25.6686861425847 chr5 88720003 88722079 + 25.6686861425847 NA 5' UTR (NM_026735, exon 1 of 6) 5' UTR (NM_026735, exon 1 of 6) 170 NM_026735 68473 Mm.35764 NM_026735 ENSMUSG00000006262 Mob1b 1110003E08Rik|AU015450|B230364F10|Mobkl1a MOB kinase activator 1B protein-coding common_peak2_414_3323_0.358906789276324_11.8781580614085_25.6589723961815 chr17 34185963 34188738 + 25.6589723961815 NA promoter-TSS (NM_001161730) promoter-TSS (NM_001161730) -20 NM_013585 16912 Mm.390983 NM_013585 ENSMUSG00000096727 Psmb9 Lmp-2|Lmp2 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) protein-coding common_peak2_412_3301_0.359938109394037_11.8690934596103_25.6548484541122 chr9 107631725 107636480 + 25.6548484541122 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 1240 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak1_373_4747_-0.339574234353526_12.0433171024651_25.6540124600481 chr18 65413253 65416953 + 25.6540124600481 NA intron (NR_105742, intron 3 of 6) intron (NR_105742, intron 3 of 6) -15894 NM_172833 240354 Mm.132613 NM_172833 ENSMUSG00000032688 Malt1 A630046N12|D430033E09Rik|Pcasp1 MALT1 paracaspase protein-coding common_peak2_487_4156_0.323029351981667_12.1828417086152_25.6505618246212 chr6 125348635 125355563 + 25.6505618246212 NA intron (NM_011609, intron 1 of 9) intron (NM_011609, intron 1 of 9) 2376 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding common_peak2_122_543_0.818114939968371_9.49652031123452_25.6501963588138 chr11 97279246 97281207 + 25.6501963588138 NA exon (NM_008942, exon 1 of 23) exon (NM_008942, exon 1 of 23) 350 NM_008942 19155 Mm.29824 NM_008942 ENSMUSG00000001441 Npepps AAP-S|MP100|Psa|R74825|goku aminopeptidase puromycin sensitive protein-coding common_peak2_66_841_-0.887132722916672_9.27411006160806_25.6484403324057 chr7 16221138 16222535 + 25.6484403324057 NA 5' UTR (NM_001285932, exon 1 of 17) 5' UTR (NM_001285932, exon 1 of 17) 157 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak1_16_288_-1.77138942152651_7.28923097173742_25.6434692740618 chr6 48711490 48711889 + 25.6434692740618 NA Intergenic Intergenic -3445 NM_153175 231931 Mm.321047 NM_153175 ENSMUSG00000047867 Gimap6 4833419H03Rik|Ian6|mFLJ00102 GTPase, IMAP family member 6 protein-coding common_peak2_125_565_0.803563228306256_9.54643985698501_25.6385767859349 chr17 34295021 34297331 + 25.6385767859349 NA Intergenic Intergenic -8405 NM_010378 14960 Mm.235338 NM_010378 ENSMUSG00000036594 H2-Aa Aalpha|H-2Aa|H2Aa|I-Aalpha|IAalpha|Ia-1|Ia1 histocompatibility 2, class II antigen A, alpha protein-coding common_peak1_27_408_-1.38939228292382_7.98126089147984_25.6373167875112 chr12 99640791 99641376 + 25.6373167875112 NA Intergenic Intergenic -13109 NR_045288 73457 Mm.383439 NR_045288 ENSMUSG00000100211 1700064M15Rik - RIKEN cDNA 1700064M15 gene ncRNA common_peak2_270_1817_0.475331049153299_11.0658020087708_25.6133171833674 chr16 3974830 3977947 + 25.6133171833674 NA 5' UTR (NM_001081280, exon 1 of 18) 5' UTR (NM_001081280, exon 1 of 18) 244 NM_175547 268857 Mm.215994 NM_175547 ENSMUSG00000049871 Nlrc3 CLR16.2|D230007K08Rik|mFLJ00348 NLR family, CARD domain containing 3 protein-coding common_peak2_74_932_-0.835583562562093_9.44794148957071_25.6060319948485 chr11 77981298 77982565 + 25.6060319948485 NA promoter-TSS (NM_174852) promoter-TSS (NM_174852) -885 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding common_peak1_108_445_0.890842335609332_9.24632106772497_25.600840177352 chr5 143517335 143519080 + 25.600840177352 NA intron (NM_009007, intron 1 of 5) intron (NM_009007, intron 1 of 5) 9786 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e RAS-related C3 botulinum substrate 1 protein-coding common_peak2_651_6162_0.26765199052547_12.7232430710313_25.6007013805225 chr2 32718159 32729421 + 25.6007013805225 NA intron (NR_045535, intron 1 of 12) B3A|SINE|B2 2735 NM_013781 27387 Mm.9593 NM_013781 ENSMUSG00000059013 Sh2d3c Chat|Nsp3|Shep1 SH2 domain containing 3C protein-coding common_peak2_39_540_-1.16173824500968_8.49861566132197_25.5947545837634 chrX 38634299 38635139 + 25.5947545837634 NA intron (NM_021550, intron 1 of 1) intron (NM_021550, intron 1 of 1) 424 NM_021550 59048 Mm.441410 NM_021550 ENSMUSG00000048970 C1galt1c1 1500002I11Rik|AB030184|C1GalT2|C81205|Cosmc C1GALT1-specific chaperone 1 protein-coding common_peak2_490_4192_0.321434824637407_12.1944845271651_25.5931673633573 chr12 69471292 69477360 + 25.5931673633573 NA intron (NR_038060, intron 2 of 4) intron (NR_038060, intron 2 of 4) 1224 NR_038060 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak1_308_2195_0.435020060924824_11.3181723694676_25.5874754347473 chr8 109692415 109694211 + 25.5874754347473 NA promoter-TSS (NM_028018) promoter-TSS (NM_028018) -19 NM_028018 71955 Mm.290036 NM_028018 ENSMUSG00000031729 Ist1 2400003C14Rik|AW536298|mKIAA0174 increased sodium tolerance 1 homolog (yeast) protein-coding common_peak2_151_763_0.70277230892021_9.92881498249585_25.5784303318355 chr2 165792017 165794833 + 25.5784303318355 NA intron (NM_001291158, intron 20 of 23) intron (NM_001291158, intron 20 of 23) 64748 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_130_602_0.781073069946789_9.62655072687348_25.5717932532543 chr8 45332370 45334002 + 25.5717932532543 NA promoter-TSS (NM_133969) promoter-TSS (NM_133969) 10 NM_133969 102294 Mm.245297 NM_133969 ENSMUSG00000079057 Cyp4v3 AU043077|AW111961|Cyp4v2 cytochrome P450, family 4, subfamily v, polypeptide 3 protein-coding common_peak1_98_1208_-0.718144065434959_9.88052649653164_25.5577108487018 chr4 118179019 118180764 + 25.5577108487018 NA intron (NM_001161823, intron 1 of 21) intron (NM_001161823, intron 1 of 21) 152 NM_172382 230674 Mm.234234 NM_172382 ENSMUSG00000033326 Kdm4a D4Ertd222e|JHDM3A|Jmjd2|Jmjd2a|mKIAA0677 lysine (K)-specific demethylase 4A protein-coding common_peak1_556_4981_0.295880021407173_12.4304493169444_25.553285760406 chr12 76532802 76538761 + 25.553285760406 NA intron (NM_153804, intron 1 of 18) intron (NM_153804, intron 1 of 18) 2221 NM_153804 263406 Mm.291854 NM_153804 ENSMUSG00000052609 Plekhg3 BC030417 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 protein-coding common_peak1_315_2267_0.4281187885438_11.3612643192141_25.5504379152643 chr11 32641954 32644043 + 25.5504379152643 NA intron (NM_001271349, intron 1 of 11) CpG 443 NM_001271347 103583 Mm.28017 NM_134015 ENSMUSG00000020271 Fbxw11 2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS F-box and WD-40 domain protein 11 protein-coding common_peak1_42_572_-1.11666415850295_8.60405924950543_25.53162359498 chr11 83472317 83473086 + 25.53162359498 NA promoter-TSS (NM_027427) promoter-TSS (NM_027427) -407 NM_027427 70439 Mm.181050 NM_027427 ENSMUSG00000020680 Taf15 2610111C21Rik|68kDa|TAFII68|Taf2n TATA-box binding protein associated factor 15 protein-coding common_peak1_320_4020_-0.370233685291304_11.7882217781547_25.5308347246927 chr14 75844083 75846230 + 25.5308347246927 NA promoter-TSS (NM_009429) promoter-TSS (NM_009429) -100 NM_009429 22070 Mm.297482 NM_009429 ENSMUSG00000060126 Tpt1 TCTP|Trt|p21|p23 tumor protein, translationally-controlled 1 protein-coding common_peak2_154_787_0.692735972156251_9.9684198055345_25.5270756399031 chr11 21177809 21181517 + 25.5270756399031 NA Intergenic Intergenic -59369 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak2_54_705_-0.982233354885265_8.97240769582855_25.5265292381331 chrX 85775818 85777755 + 25.5265292381331 NA promoter-TSS (NM_008194) promoter-TSS (NM_008194) 33 NM_001294140 14933 Mm.246682 NM_008194 ENSMUSG00000025059 Gk D930012N15Rik|Gyk glycerol kinase protein-coding common_peak2_173_2111_-0.524983977506245_10.7819021306053_25.5227760432055 chr1 52032473 52037246 + 25.5227760432055 NA intron (NM_011487, intron 3 of 23) intron (NM_011487, intron 3 of 23) 26619 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 protein-coding common_peak1_109_1336_-0.676880420521082_10.0463435398328_25.5205255599468 chr6 39378578 39379907 + 25.5205255599468 NA Intergenic B3|SINE|B2 -1535 NM_028123 72144 Mm.482167 NM_028123 ENSMUSG00000029924 Slc37a3 2610507O21Rik|AU044904 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 protein-coding unique_peak2_65_829_-0.893035267387051_9.25044989254076_25.5190126136133 chr6 129273305 129276450 + 25.5190126136133 NA intron (NM_001033122, intron 1 of 4) intron (NM_001033122, intron 1 of 4) 492 NM_001033122 12515 Mm.74745 NM_001033122 ENSMUSG00000030156 Cd69 5830438K24Rik|AI452015|AIM|VEA CD69 antigen protein-coding common_peak1_83_284_1.07588115711911_8.69275868761166_25.513747837717 chr11 106761673 106762793 + 25.513747837717 NA intron (NR_073165, intron 6 of 9) intron (NR_073165, intron 6 of 9) 11007 NM_001033435 380732 Mm.343952 NM_001033435 ENSMUSG00000040528 Milr1 Allergin-1|Gm885|Mca32 mast cell immunoglobulin like receptor 1 protein-coding common_peak2_92_340_0.997188791863417_8.91222232495588_25.5133879048268 chr2 20961038 20962802 + 25.5133879048268 NA intron (NM_001081364, intron 1 of 23) intron (NM_001081364, intron 1 of 23) 5801 NM_001081364 71435 Mm.28507 NM_001081364 ENSMUSG00000036591 Arhgap21 5530401C11Rik|AA416458|ARHGAP10 Rho GTPase activating protein 21 protein-coding common_peak2_86_1068_-0.769248307054637_9.67742198419317_25.5050728188254 chr10 59878943 59880717 + 25.5050728188254 NA intron (NM_019965, intron 1 of 8) CpG 239 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_83_1034_-0.784715786215477_9.62305715927895_25.5013349666538 chr19 4184574 4185981 + 25.5013349666538 NA intron (NM_178650, intron 9 of 9) intron (NM_178650, intron 9 of 9) 5770 NM_178650 108995 Mm.288312 NM_178650 ENSMUSG00000040247 Tbc1d10c 1810062O14Rik|AI428527 TBC1 domain family, member 10c protein-coding common_peak1_82_1022_-0.789084560576981_9.60404814945684_25.480410840476 chr6 8648106 8648868 + 25.480410840476 NA intron (NM_001252266, intron 10 of 11) intron (NM_001252266, intron 10 of 11) 109971 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak1_32_462_-1.27754843559936_8.21609416546056_25.4772756428666 chr2 165319002 165319628 + 25.4772756428666 NA intron (NM_080287, intron 1 of 20) intron (NM_080287, intron 1 of 20) 1511 NM_001302752 140579 Mm.35064 NM_080287 ENSMUSG00000017670 Elmo2 1190002F24Rik|CED-12 engulfment and cell motility 2 protein-coding common_peak1_23_363_-1.4940191721066_7.7607850541454_25.4731348175134 chr19 41329037 41329524 + 25.4731348175134 NA exon (NM_031376, exon 4 of 17) exon (NM_031376, exon 4 of 17) 55790 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_23_363_-1.4940191721066_7.7607850541454_25.4731348175134-2 chrX 12080204 12080693 + 25.4731348175134 NA 5' UTR (NM_029510, exon 1 of 15) 5' UTR (NM_029510, exon 1 of 15) 105 NM_175045 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_85_296_1.05802036063954_8.74332930112054_25.4708472101549 chr18 88893330 88894599 + 25.4708472101549 NA intron (NM_018821, intron 1 of 2) CpG 243 NM_018821 54607 Mm.91920 NM_018821 ENSMUSG00000056153 Socs6 1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4 suppressor of cytokine signaling 6 protein-coding common_peak1_160_1949_-0.547261495277994_10.655627660998_25.4663488607593 chr7 139155518 139157631 + 25.4663488607593 NA intron (NM_001162540, intron 1 of 11) intron (NM_001162540, intron 1 of 11) 31920 NM_021302 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding common_peak1_730_7188_0.24788402447258_12.9355174006121_25.4616592386468 chr17 83705137 83709658 + 25.4616592386468 NA intron (NM_001171052, intron 1 of 15) intron (NM_001171052, intron 1 of 15) 1234 NM_001171052 116871 Mm.277668 NM_054082 ENSMUSG00000055817 Mta3 1110002J22Rik|mKIAA1266 metastasis associated 3 protein-coding common_peak1_35_494_-1.21998704190795_8.341291194013_25.456403277038 chr6 136491214 136491890 + 25.456403277038 NA Intergenic Intergenic -27299 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak2_234_1478_0.520830337205268_10.7908215057017_25.4525206002925 chr2 29690182 29695711 + 25.4525206002925 NA intron (NM_054050, intron 5 of 23) B1_Mus1|SINE|Alu -68582 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding unique_peak1_31_33_2.43540273306118_6.30516420778093_25.450216259342 chr11 72109781 72110409 + 25.450216259342 NA intron (NM_001024927, intron 3 of 19) intron (NM_001024927, intron 3 of 19) 25794 NM_001024927 327958 Mm.351793 NM_001024927 ENSMUSG00000040543 Pitpnm3 A330068P14Rik|AI848332|Ackr6|Gm880 PITPNM family member 3 protein-coding common_peak1_124_1513_-0.630028710971029_10.2491351345002_25.4474919825576 chr4 40838805 40840471 + 25.4474919825576 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) 10500 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA common_peak1_36_506_-1.20605828579193_8.38281279410738_25.4419715212703 chr6 142560780 142561376 + 25.4419715212703 NA Intergenic Intergenic 10278 NM_008428 16523 Mm.1482 NM_008428 ENSMUSG00000030247 Kcnj8 AI448900|Kir6.1|gnite|slmbr|sltr|uKATP-1 potassium inwardly-rectifying channel, subfamily J, member 8 protein-coding common_peak1_29_429_-1.33953641699176_8.07842464109358_25.4398257687445 chr9 111212415 111212930 + 25.4398257687445 NA intron (NM_001164838, intron 9 of 14) intron (NM_001164838, intron 9 of 14) 58936 NM_026810 17350 Mm.486383 NM_026810 ENSMUSG00000032498 Mlh1 1110035C23Rik|AI317206|AI325952|AI561766 mutL homolog 1 protein-coding common_peak2_70_885_-0.858003342708001_9.36216121720102_25.4392999548675 chr1 171121731 171123772 + 25.4392999548675 NA intron (NM_001081275, intron 1 of 5) intron (NM_001081275, intron 1 of 5) 1090 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak1_109_1335_-0.67580096290178_10.0458038110232_25.4306115119325 chr7 80782429 80784483 + 25.4306115119325 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 19875 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_360_4563_-0.345158687874644_11.9835037323514_25.4111623396766 chr2 32493727 32496538 + 25.4111623396766 NA Intergenic Intergenic -40227 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak1_102_406_0.922662899510492_9.13021643402149_25.4073382279871 chr1 161704562 161706075 + 25.4073382279871 NA Intergenic Intergenic 83177 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_86_1067_-0.767898101021702_9.6767468811767_25.4047165222159 chr7 19817716 19818937 + 25.4047165222159 NA intron (NM_033601, intron 2 of 8) ID_B1|SINE|B4 4429 NM_033601 12051 Mm.439658 NM_033601 ENSMUSG00000053175 Bcl3 AI528691|Bcl-3 B cell leukemia/lymphoma 3 protein-coding common_peak1_278_1898_0.463927046891376_11.1229877135952_25.3987346769729 chr5 9099991 9102003 + 25.3987346769729 NA intron (NM_001081029, intron 1 of 4) CpG 260 NM_001081029 652925 Mm.439954 NM_001081029 ENSMUSG00000079659 Tmem243 4930420K17Rik|E030031F02Rik transmembrane protein 243, mitochondrial protein-coding common_peak2_271_1830_0.471569429922258_11.0742007907585_25.3960194405582 chr4 116052558 116054658 + 25.3960194405582 NA intron (NM_028142, intron 1 of 5) intron (NM_028142, intron 1 of 5) 268 NM_028142 72181 Mm.282560 NM_028142 ENSMUSG00000028706 Nsun4 2310010O12Rik|2810405F18Rik|AI507900|Shtap NOL1/NOP2/Sun domain family, member 4 protein-coding common_peak1_18_308_-1.67109882450748_7.43591361565063_25.3893727435982 chrX 168672953 168673423 + 25.3893727435982 NA intron (NM_010832, intron 1 of 11) intron (NM_010832, intron 1 of 11) 714 NM_010832 17692 Mm.24248 NM_010832 ENSMUSG00000031358 Msl3 AU018931|Msl31|Msl3l1 male-specific lethal 3 homolog (Drosophila) protein-coding common_peak2_296_2077_0.444609041063236_11.2432844594358_25.3681672571837 chr10 81403855 81410270 + 25.3681672571837 NA intron (NM_026756, intron 6 of 8) intron (NM_026756, intron 6 of 8) 9235 NR_106141 102465778 NR_106141 ENSMUSG00000105379 Mir1191b mmu-mir-1191b microRNA 1191b ncRNA common_peak1_50_660_-1.02083568438024_8.85808861931757_25.3619026680967 chr9 21367787 21368766 + 25.3619026680967 NA promoter-TSS (NM_001277322) promoter-TSS (NM_001277322) -256 NM_001277322 16201 Mm.440026 NM_010561 ENSMUSG00000032178 Ilf3 MBII-26|MPHOSPH4|NF90|NFAR interleukin enhancer binding factor 3 protein-coding common_peak1_318_2300_0.423999459416333_11.3800449979323_25.3570574231604 chr18 80468698 80470787 + 25.3570574231604 NA promoter-TSS (NM_026295) promoter-TSS (NM_026295) -75 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding common_peak2_119_524_0.825707442416931_9.44902733376195_25.3557657764564 chr19 9037625 9041056 + 25.3557657764564 NA intron (NM_001039959, intron 5 of 5) intron (NM_001039959, intron 5 of 5) 21436 NR_105786 102465190 NR_105786 ENSMUSG00000099308 Mir6367 Gm27467|mmu-mir-6367 microRNA 6367 ncRNA common_peak1_107_440_0.890797343654786_9.23003351738491_25.3498980825804 chr1 151571140 151572199 + 25.3498980825804 NA intron (NM_022018, intron 1 of 13) CpG 296 NM_022018 63913 Mm.157700 NM_022018 ENSMUSG00000026483 Fam129a AI256368|AU019833|Niban family with sequence similarity 129, member A protein-coding common_peak1_93_1148_-0.736419684033738_9.79795324062924_25.3462801718212-2 chr8 72354599 72355898 + 25.3462801718212 NA intron (NM_007944, intron 22 of 23) intron (NM_007944, intron 22 of 23) 36186 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_93_1148_-0.736419684033738_9.79795324062924_25.3462801718212 chr5 8675821 8677357 + 25.3462801718212 NA intron (NM_011076, intron 4 of 27) intron (NM_011076, intron 4 of 27) 16497 NM_011076 18671 Mm.207354 NM_011076 ENSMUSG00000040584 Abcb1a Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3 ATP-binding cassette, sub-family B (MDR/TAP), member 1A protein-coding common_peak1_172_934_0.64038797671755_10.1890165431338_25.3445324632092 chr5 34196729 34198149 + 25.3445324632092 NA intron (NM_001015039, intron 11 of 12) intron (NM_001015039, intron 11 of 12) -9729 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding common_peak1_128_1560_-0.618393135570676_10.2990582541926_25.3332547714533 chr4 43442275 43443826 + 25.3332547714533 NA 5' UTR (NM_011571, exon 1 of 10) 5' UTR (NM_011571, exon 1 of 10) 773 NM_011571 21754 Mm.485441 NM_011571 ENSMUSG00000028458 Tesk1 AI326901 testis specific protein kinase 1 protein-coding common_peak2_140_1704_-0.588290420332232_10.4414108137454_25.3303776487431 chr7 4459407 4462369 + 25.3303776487431 NA Intergenic Intergenic -3847 NM_026146 67425 Mm.360392 NM_026146 ENSMUSG00000006154 Eps8l1 2310051G19Rik|4632407K17Rik|AW060268|DRC3|EPS8R1 EPS8-like 1 protein-coding common_peak1_309_2209_0.43156944852019_11.3256153785389_25.3295071715034 chr4 151056794 151058054 + 25.3295071715034 NA intron (NM_009498, intron 1 of 4) intron (NM_009498, intron 1 of 4) 529 NM_009498 22319 Mm.273930 NM_009498 ENSMUSG00000028955 Vamp3 D130027G05Rik|VAMP-3|ceb vesicle-associated membrane protein 3 protein-coding common_peak1_193_1112_0.591712797207805_10.4160942759459_25.3282510224956 chr6 114904360 114906445 + 25.3282510224956 NA intron (NM_177683, intron 1 of 4) ORR1D2|LTR|ERVL-MaLR 16350 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_271_1831_0.470781717622652_11.0745946469083_25.3191874213057 chr4 116052510 116054604 + 25.3191874213057 NA intron (NM_028142, intron 1 of 5) intron (NM_028142, intron 1 of 5) 319 NM_028142 72181 Mm.282560 NM_028142 ENSMUSG00000028706 Nsun4 2310010O12Rik|2810405F18Rik|AI507900|Shtap NOL1/NOP2/Sun domain family, member 4 protein-coding common_peak1_207_1235_0.563795150295626_10.5533606030522_25.3120147213458 chr15 82898622 82900022 + 25.3120147213458 NA promoter-TSS (NR_027799) promoter-TSS (NR_027799) 242 NR_045068 100504637 Mm.440928 NR_045068 ENSMUSG00000100199 Gm20324 - predicted gene, 20324 ncRNA common_peak1_489_4186_0.319892932235058_12.1916476688578_25.305996475697 chr15 80254290 80256680 + 25.305996475697 NA 5' UTR (NM_009716, exon 1 of 3) 5' UTR (NM_009716, exon 1 of 3) 301 NM_009716 11911 Mm.641 NM_009716 ENSMUSG00000042406 Atf4 Atf-4|C/ATF|CREB2|TAXREB67 activating transcription factor 4 protein-coding unique_peak2_41_560_-1.12777000562394_8.56797195779682_25.2952240857676 chr3 9033370 9035310 + 25.2952240857676 NA Intergenic Intergenic -27624 NR_040597 75149 Mm.399324 NR_040597 ENSMUSG00000103116 4930539M17Rik - RIKEN cDNA 4930539M17 gene ncRNA common_peak1_307_2189_0.433231008657243_11.3133306588172_25.2832288531535 chr11 69900257 69902476 + 25.2832288531535 NA promoter-TSS (NM_001013414) promoter-TSS (NM_001013414) -380 NM_027419 70419 Mm.272859 NM_027419 ENSMUSG00000018570 2810408A11Rik 1700019L01Rik|4930470J18Rik RIKEN cDNA 2810408A11 gene protein-coding common_peak1_118_517_0.830264082553089_9.4319403289631_25.2826158159446 chr4 145232821 145234629 + 25.2826158159446 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 13145 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_73_917_-0.835954381016041_9.42437315290579_25.2823618535622 chr13 48524246 48526630 + 25.2823618535622 NA Intergenic RLTR30|LTR|ERV1 10676 NR_029656 387247 NR_029656 ENSMUSG00000065453 Mirlet7d Mirnlet7d|let-7d|mmu-let-7d microRNA let7d ncRNA common_peak1_40_65_1.91704914570697_7.00291869221194_25.2815447477885 chr13 114902588 114903295 + 25.2815447477885 NA intron (NM_008396, intron 1 of 29) intron (NM_008396, intron 1 of 29) 29100 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_34_43_2.22201409588624_6.57043866658042_25.2811371817815 chr16 87709328 87709881 + 25.2811371817815 NA intron (NM_007520, intron 1 of 4) L1M5|LINE|L1 10650 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak2_422_3419_0.351619509959324_11.9155903647529_25.2781876119508 chr11 3201172 3203794 + 25.2781876119508 NA promoter-TSS (NM_001166549) promoter-TSS (NM_001166549) -100 NM_023743 74203 Mm.255649 NM_023743 ENSMUSG00000020454 Eif4enif1 2610509L04Rik|A930019J01Rik|AA410001|AU021239|Clast4|D11Ertd166e eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding common_peak1_46_90_1.69533644722732_7.35546286381236_25.2745180286212 chr15 82851407 82852233 + 25.2745180286212 NA exon (NM_001114140, exon 2 of 6) exon (NM_001114140, exon 2 of 6) 46641 NR_027799 21378 Mm.417272 NR_027799 Tbrg3 TB-11 transforming growth factor beta regulated gene 3 ncRNA common_peak2_46_90_1.69533644722732_7.35546286381236_25.2745180286212 chr13 63246269 63247047 + 25.2745180286212 NA intron (NM_001289924, intron 13 of 16) intron (NM_001289924, intron 13 of 16) 6629 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_150_757_0.702466346814459_9.91728721157832_25.2661535357621 chr9 110407322 110409005 + 25.2661535357621 NA promoter-TSS (NM_001081043) promoter-TSS (NM_001081043) 47 NM_001081043 104831 Mm.335477 NM_001081043 ENSMUSG00000036057 Ptpn23 AI462446|PTP-TD14 protein tyrosine phosphatase, non-receptor type 23 protein-coding common_peak2_233_1471_0.520128320890489_10.7836261165023_25.2655435790914 chr3 59129549 59134117 + 25.2655435790914 NA promoter-TSS (NM_001287123) promoter-TSS (NM_001287123) -505 NM_001287123 140795 Mm.439021 NM_133200 ENSMUSG00000036381 P2ry14 A330108O13Rik|Gpr105|P2Y14 purinergic receptor P2Y, G-protein coupled, 14 protein-coding common_peak2_375_2902_0.379639164358426_11.6931484388059_25.2646801391801 chr19 44387047 44390393 + 25.2646801391801 NA Intergenic Intergenic 18989 NM_009127 20249 Mm.267377 NM_009127 ENSMUSG00000037071 Scd1 AA589638|AI265570|Scd|Scd-1|ab stearoyl-Coenzyme A desaturase 1 protein-coding common_peak1_196_2394_-0.486703323998244_10.9824582786244_25.2509689719927 chr10 80695473 80697412 + 25.2509689719927 NA intron (NM_172457, intron 1 of 3) B4A|SINE|B4 5378 NM_172457 208228 Mm.49309 NM_172457 ENSMUSG00000003348 Mob3a 5330417K06Rik|A630029F06|AV218468|Mobkl2a MOB kinase activator 3A protein-coding common_peak1_50_659_-1.01865143711836_8.85699649568664_25.2353145241386 chr11 69125264 69126578 + 25.2353145241386 NA promoter-TSS (NM_011786) promoter-TSS (NM_011786) -456 NM_011786 23801 Mm.41989 NM_011786 ENSMUSG00000020892 Aloxe3 e-LOX-3|eLOX-3 arachidonate lipoxygenase 3 protein-coding common_peak2_71_215_1.20302248208191_8.35639874320442_25.2320255212982 chr18 50052759 50054132 + 25.2320255212982 NA 5' UTR (NM_134131, exon 1 of 2) 5' UTR (NM_134131, exon 1 of 2) 163 NM_134131 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding common_peak2_56_136_1.44646663658965_7.82126540125535_25.2146323822104 chr9 38718081 38719227 + 25.2146323822104 NA intron (NM_001145957, intron 1 of 18) C-rich|Low_complexity|Low_complexity 386 NM_172767 67776 Mm.290950 NM_172767 ENSMUSG00000023186 Vwa5a 5830475I06Rik|AW552491|BCSC-1|E130119J22|Loh11cr2a von Willebrand factor A domain containing 5A protein-coding common_peak1_80_997_-0.796553922344382_9.56461904416507_25.204871154973 chr2 129297296 129298173 + 25.204871154973 NA promoter-TSS (NM_181589) promoter-TSS (NM_181589) 364 NR_040371 100503468 Mm.446943 NR_040371 ENSMUSG00000085498 Gm14023 OTTMUSG00000015408 predicted gene 14023 ncRNA common_peak2_101_400_0.926824661858893_9.11087075738437_25.2020488500602 chr2 118901203 118902899 + 25.2020488500602 NA intron (NM_001045523, intron 1 of 6) CpG 436 NM_001045523 228536 Mm.330487 NM_001045523 ENSMUSG00000040007 Bahd1 AL022997|AW541238|Gm117|mKIAA0945 bromo adjacent homology domain containing 1 protein-coding common_peak1_97_374_0.952741762713798_9.02711766674014_25.1960374032434 chr3 97900793 97901837 + 25.1960374032434 NA promoter-TSS (NM_011342) promoter-TSS (NM_011342) 88 NM_011342 20333 Mm.2551 NM_011342 ENSMUSG00000027879 Sec22b 4930564D15Rik|AA517334|AI480645|C81333|ERS-24|Sec22l1 SEC22 homolog B, vesicle trafficking protein protein-coding common_peak1_124_1510_-0.627167166150125_10.2477043620898_25.1945140678817 chr4 41773101 41774895 + 25.1945140678817 NA 5' UTR (NM_001164045, exon 1 of 3) 5' UTR (NM_001164045, exon 1 of 3) 103 NM_001164045 20301 Mm.335946 NM_011336 ENSMUSG00000073888 Ccl27a ALP|AW558992|CTACK|CTAK|Ccl27|ESkine|ILC|PESKY|Scya27|Scya27a chemokine (C-C motif) ligand 27A protein-coding common_peak1_53_691_-0.985808349610775_8.94172405283134_25.1829573597978 chr7 16221544 16222171 + 25.1829573597978 NA 5' UTR (NM_001285932, exon 1 of 17) 5' UTR (NM_001285932, exon 1 of 17) 136 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak2_540_4795_0.299195890036684_12.3772138884326_25.179274836868 chrX 48423241 48437751 + 25.179274836868 NA intron (NM_019680, intron 1 of 8) PB1|SINE|Alu 32636 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak1_104_1274_-0.690701301069401_9.97093088121152_25.1773881772388 chr1 52035380 52036984 + 25.1773881772388 NA intron (NM_011487, intron 3 of 23) intron (NM_011487, intron 3 of 23) 27942 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 protein-coding common_peak1_311_2231_0.428659071337743_11.3384508474981_25.1773320217704 chr2 23038673 23040473 + 25.1773320217704 NA intron (NM_001077190, intron 1 of 10) CpG 668 NM_001077192 11308 Mm.205647 NM_007380 ENSMUSG00000058835 Abi1 E3B1|NAP1|Ssh3bp1|abi-1 abl-interactor 1 protein-coding common_peak1_39_537_-1.15371582373949_8.49460445068688_25.1752270789035 chr5 34659541 34660122 + 25.1752270789035 NA promoter-TSS (NM_001080743) promoter-TSS (NM_001080743) 317 NM_029278 75416 Mm.40292 NM_029278 ENSMUSG00000036693 Nop14 2610033H07Rik|Nol14 NOP14 nucleolar protein protein-coding common_peak2_78_973_-0.805678870969025_9.52493852659783_25.1741715035023 chr2 172436299 172438998 + 25.1741715035023 NA Intergenic Intergenic -2930 NM_025542 66404 Mm.25157 NM_025542 ENSMUSG00000027502 Rtfdc1 1700067C04Rik|2410001C21Rik|5730427M17Rik|AA589417 replication termination factor 2 domain containing 1 protein-coding common_peak2_89_323_1.01294094586636_8.84632047581781_25.1406091231496 chr6 108709054 108710354 + 25.1406091231496 NA Intergenic Intergenic -48770 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_381_2969_0.374736601485022_11.7236155164306_25.1394621456234 chr7 140855160 140858527 + 25.1394621456234 NA promoter-TSS (NM_018742) promoter-TSS (NM_018742) -460 NM_018742 54399 Mm.155696 NM_018742 ENSMUSG00000025484 Bet1l 2610021K23Rik|Gs15 Bet1 golgi vesicular membrane trafficking protein like protein-coding common_peak1_28_416_-1.35524025893209_8.02628344397862_25.1359141454936 chr3 146332073 146332758 + 25.1359141454936 NA Intergenic MTD|LTR|ERVL-MaLR 46529 NR_033542 100038607 Mm.365888 NR_033542 ENSMUSG00000105602 Gm10636 ENSMUSG00000074175 predicted gene 10636 ncRNA common_peak1_23_361_-1.48607041899111_7.75681067758765_25.1358211735888 chr2 35201234 35201725 + 25.1358211735888 NA promoter-TSS (NM_026697) promoter-TSS (NM_026697) -359 NM_026697 68365 Mm.198264 NM_026697 ENSMUSG00000026878 Rab14 0610030G24Rik|2810475J17Rik|A830021G03Rik|AI314285|AI649155|D030017L14Rik RAB14, member RAS oncogene family protein-coding common_peak1_22_351_-1.52097081454379_7.6989462113654_25.1314405734249 chr14 79533162 79533701 + 25.1314405734249 NA intron (NM_001286411, intron 1 of 8) intron (NM_001286411, intron 1 of 8) 17757 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak1_42_569_-1.10909093879815_8.60027263965303_25.1240464843369 chr8 83594642 83595253 + 25.1240464843369 NA promoter-TSS (NM_027179) promoter-TSS (NM_027179) -456 NM_134118 106529 Mm.352239 NM_027179 ENSMUSG00000031708 Tecr 2410016D23Rik|A230102P12Rik|AI173355|D17Ertd178e|Gpsn2|SC2 trans-2,3-enoyl-CoA reductase protein-coding common_peak2_411_3299_0.356522197016274_11.8665114076413_25.1111675150352 chr11 59808577 59810836 + 25.1111675150352 NA promoter-TSS (NR_045686) promoter-TSS (NR_045686) -105 NM_001271357 216805 Mm.339640 NM_146018 ENSMUSG00000032633 Flcn AU014660|B430214A04Rik|Bhd|FLCL folliculin protein-coding common_peak1_68_859_-0.865597529342665_9.31539408491813_25.0917134739566 chrX 48146197 48147374 + 25.0917134739566 NA intron (NM_028773, intron 1 of 7) intron (NM_028773, intron 1 of 7) 349 NM_028773 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding common_peak1_387_3035_0.370606910320653_11.7532595305758_25.0818024446749 chr11 59809297 59810768 + 25.0818024446749 NA promoter-TSS (NR_073164) promoter-TSS (NR_073164) 7 NM_001271356 216805 Mm.339640 NM_146018 ENSMUSG00000032633 Flcn AU014660|B430214A04Rik|Bhd|FLCL folliculin protein-coding common_peak2_88_317_1.02013541347983_8.82295066202427_25.079268586813 chr10 127738695 127740292 + 25.079268586813 NA promoter-TSS (NM_198035) promoter-TSS (NM_198035) -45 NM_198035 320080 Mm.27258 NM_198035 ENSMUSG00000044617 Zbtb39 7030401O21Rik|mKIAA0352 zinc finger and BTB domain containing 39 protein-coding common_peak1_45_602_-1.07094107662022_8.70054365358997_25.0722227382893 chr4 141862896 141863838 + 25.0722227382893 NA intron (NM_025994, intron 1 of 3) intron (NM_025994, intron 1 of 3) 11553 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_59_152_1.37788090109141_7.94632829323836_25.0617364419528 chr9 36796519 36797501 + 25.0617364419528 NA promoter-TSS (NM_007915) promoter-TSS (NM_007915) 58 NM_007915 13663 Mm.4337 NM_007915 ENSMUSG00000062762 Ei24 AA536736|AI115355|PIG8 etoposide induced 2.4 mRNA protein-coding common_peak1_61_780_-0.915884222221317_9.15123662703132_25.0596099498237 chr4 129575579 129576473 + 25.0596099498237 NA TTS (NM_182783) TTS (NM_182783) -2385 NM_001162433 16818 Mm.293753 NM_010693 ENSMUSG00000000409 Lck Hck-3|Lsk|Lskt|p56|p56Lck lymphocyte protein tyrosine kinase protein-coding unique_peak2_15_274_-1.80703454528685_7.19977053576859_25.056341887879 chr12 84361228 84362580 + 25.056341887879 NA promoter-TSS (NM_172582) promoter-TSS (NM_172582) -64 NM_172582 217707 Mm.280062 NM_172582 ENSMUSG00000021235 Coq6 5930427M12Rik|AW742344 coenzyme Q6 monooxygenase protein-coding common_peak1_59_758_-0.932687331631406_9.10161240959976_25.0551693359565 chr1 138975085 138976236 + 25.0551693359565 NA intron (NM_181347, intron 1 of 20) intron (NM_181347, intron 1 of 20) -1997 NR_108103 78229 Mm.437838 NR_108103 ENSMUSG00000104900 4930596I21Rik - RIKEN cDNA 4930596I21 gene ncRNA common_peak2_443_3660_0.33912073143286_12.007582424021_25.05147390495 chr13 107888274 107892734 + 25.05147390495 NA promoter-TSS (NM_145456) promoter-TSS (NM_145456) -440 NM_145456 67263 Mm.490418 NM_145456 ENSMUSG00000032846 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak2_562_5065_0.290718441945167_12.4519905826851_25.0504654325435 chr6 87530065 87536867 + 25.0504654325435 NA promoter-TSS (NM_001286610) promoter-TSS (NM_001286610) -207 NM_001286610 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak1_24_372_-1.45701662811885_7.81452350619581_25.0487671271507 chr4 46527876 46528442 + 25.0487671271507 NA intron (NM_029077, intron 2 of 5) L1MEc|LINE|L1 7982 NM_029077 74735 Mm.240252 NM_029077 ENSMUSG00000039853 Trim14 5830400N10Rik|pub tripartite motif-containing 14 protein-coding common_peak2_735_7264_0.244775277505084_12.9491347212727_25.0434048335212 chr2 167343643 167354028 + 25.0434048335212 NA intron (NM_019835, intron 1 of 8) (CGCGG)n|Simple_repeat|Simple_repeat 343 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak1_559_5029_0.29155227457607_12.4421188219809_25.0431051902725 chr14 55941470 55946372 + 25.0431051902725 NA intron (NM_010780, intron 1 of 4) intron (NM_010780, intron 1 of 4) 740 NM_010780 17228 Mm.1252 NM_010780 ENSMUSG00000022225 Cma1 MMCP-5|Mcp-5|Mcp5|Mcpt5 chymase 1, mast cell protein-coding common_peak1_130_606_0.771534555591192_9.63131998405128_25.0406828542579 chr8 45332403 45334032 + 25.0406828542579 NA promoter-TSS (NM_133969) promoter-TSS (NM_133969) -21 NM_133969 102294 Mm.245297 NM_133969 ENSMUSG00000079057 Cyp4v3 AU043077|AW111961|Cyp4v2 cytochrome P450, family 4, subfamily v, polypeptide 3 protein-coding common_peak1_103_1261_-0.692850327968905_9.9550710309981_25.0326462810212 chr1 52798075 52799722 + 25.0326462810212 NA intron (NM_008384, intron 2 of 5) intron (NM_008384, intron 2 of 5) 18790 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding unique_peak1_32_37_2.32939243421729_6.41262373055223_25.027560825743 chr13 106998697 106999329 + 25.027560825743 NA intron (NM_008442, intron 1 of 21) ORR1A2|LTR|ERVL-MaLR 23101 NM_001145779 16563 Mm.355686 NM_008442 ENSMUSG00000021693 Kif2a C530030B14Rik|Kif2|Kns2|M-kinesin kinesin family member 2A protein-coding common_peak1_32_459_-1.2681701032835_8.21140499930263_25.0262411653146 chr1 54870384 54871088 + 25.0262411653146 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 55651 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_124_562_0.797129666934474_9.53555594554747_25.0085225621288-2 chr17 4907068 4908940 + 25.0085225621288 NA Intergenic CpG -87070 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_124_562_0.797129666934474_9.53555594554747_25.0085225621288 chr10 42191908 42194204 + 25.0085225621288 NA intron (NM_019740, intron 3 of 3) intron (NM_019740, intron 3 of 3) 83686 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding common_peak1_31_448_-1.28770606042962_8.16671860452633_24.9978234857558 chr3 60469293 60470065 + 24.9978234857558 NA Intergenic L1MB4|LINE|L1 -3151 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_57_734_-0.946324814024802_9.04843803271133_24.9913217384492 chr8 84847087 84847799 + 24.9913217384492 NA promoter-TSS (NM_007591) promoter-TSS (NM_007591) -512 NM_007591 12317 Mm.1971 NM_007591 ENSMUSG00000003814 Calr CRT|Calregulin calreticulin protein-coding common_peak2_84_293_1.05196950301613_8.72565709634443_24.9884896674655 chr17 22739036 22740517 + 24.9884896674655 NA Intergenic Intergenic 77971 NR_030709 100042679 Mm.484007 NR_030709 Gm16386 EG545191|ENSMUSG00000073442|Gm21017 zinc finger protein 946 pseudogene pseudo common_peak1_108_449_0.877961044312599_9.25276171337334_24.9855074579088 chr14 13960453 13961852 + 24.9855074579088 NA intron (NM_001285780, intron 1 of 8) CpG 161 NM_001285780 66231 Mm.295875 NM_025435 ENSMUSG00000053453 Thoc7 Nif3l1bp1 THO complex 7 protein-coding unique_peak1_38_58_1.99030040024602_6.87779324948485_24.9853303672322 chr10 20724478 20725172 + 24.9853303672322 NA 5' UTR (NM_013875, exon 1 of 13) 5' UTR (NM_013875, exon 1 of 13) 243 NM_013875 29863 Mm.425617 NM_013875 ENSMUSG00000019990 Pde7b - phosphodiesterase 7B protein-coding common_peak2_604_5585_0.277072573233816_12.5861361448969_24.9794250614796 chr3 65956819 65963853 + 24.9794250614796 NA Intergenic RLTR18B|LTR|ERVK -2111 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_28_415_-1.35177640362852_8.02455151632683_24.9786165357427 chr2 65188206 65188877 + 24.9786165357427 NA intron (NM_177025, intron 1 of 13) intron (NM_177025, intron 1 of 13) 50085 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak2_129_1568_-0.612102805448846_10.3095782342437_24.9728789397037 chr4 148139349 148141237 + 24.9728789397037 NA promoter-TSS (NM_027985) promoter-TSS (NM_027985) -197 NM_027985 71890 Mm.9648 NM_027985 ENSMUSG00000029003 Mad2l2 2310033C13Rik|G1-453-4|MAD2B|REV7|repro22 MAD2 mitotic arrest deficient-like 2 protein-coding common_peak1_23_360_-1.48207955879508_7.75481524748963_24.9676386687269 chr5 124329565 124330113 + 24.9676386687269 NA intron (NM_028310, intron 1 of 1) intron (NM_028310, intron 1 of 1) 1750 NM_001134717 72650 Mm.121658 NM_028310 ENSMUSG00000047635 2810006K23Rik - RIKEN cDNA 2810006K23 gene protein-coding common_peak2_67_847_-0.871159571216316_9.29234066895504_24.9558170330167 chr9 64178484 64180336 + 24.9558170330167 NA TTS (NM_024212) TTS (NM_024212) 113 NM_183316 330959 Mm.24082 NM_183316 ENSMUSG00000032398 Snapc5 2010103A03Rik small nuclear RNA activating complex, polypeptide 5 protein-coding common_peak2_101_1236_-0.698346696662558_9.92345643664509_24.9537025313843 chr9 21090852 21093111 + 24.9537025313843 NA promoter-TSS (NM_027911) promoter-TSS (NM_027911) 7 NM_027911 71766 Mm.196137 NM_027911 ENSMUSG00000010205 Raver1 1300006N24Rik|AA050359|mKIAA1978 ribonucleoprotein, PTB-binding 1 protein-coding common_peak2_96_369_0.953956902847096_9.00835991193986_24.9483787886822 chr18 75342337 75343713 + 24.9483787886822 NA Intergenic CpG -24340 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_181_2202_-0.50629642579448_10.8521055668036_24.9464767170725 chr4 150008352 150010376 + 24.9464767170725 NA promoter-TSS (NM_173371) promoter-TSS (NM_173371) -341 NM_173371 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak2_226_2771_-0.446766795149482_11.2133281445625_24.9450529471279 chr12 8920860 8923497 + 24.9450529471279 NA exon (NM_008640, exon 1 of 7) exon (NM_008640, exon 1 of 7) 871 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding common_peak1_60_768_-0.922320336914854_9.1256796195044_24.9388857475068 chr9 60998388 60999213 + 24.9388857475068 NA Intergenic Intergenic -18269 NR_040767 330956 Mm.207985 NR_040767 ENSMUSG00000111290 Gm5122 A430102L10 predicted gene 5122 ncRNA common_peak1_59_757_-0.930785294387032_9.10066139097758_24.9375266709166 chr8 72219698 72220285 + 24.9375266709166 NA exon (NM_026455, exon 2 of 4) exon (NM_026455, exon 2 of 4) 261 NM_026455 67922 Mm.28327 NM_026455 ENSMUSG00000003039 Fam32a 2510049I19Rik|AW822030|OTAG-12|Otag12 family with sequence similarity 32, member A protein-coding common_peak2_131_1591_-0.606080050510059_10.3335845952886_24.9371141337001 chr4 43442109 43443966 + 24.9371141337001 NA 5' UTR (NM_011571, exon 1 of 10) 5' UTR (NM_011571, exon 1 of 10) 760 NM_011571 21754 Mm.485441 NM_011571 ENSMUSG00000028458 Tesk1 AI326901 testis specific protein kinase 1 protein-coding common_peak2_21_338_-1.54534372044239_7.63246960291515_24.9162622741559 chr13 23533446 23534384 + 24.9162622741559 NA promoter-TSS (NM_175661) promoter-TSS (NM_175661) 4 NM_175661 319173 Mm.377878 NM_175661 ENSMUSG00000061991 Hist1h2af H2a-221 histone cluster 1, H2af protein-coding unique_peak2_33_469_-1.24636837440447_8.25333275936276_24.9158767863585 chr7 118119127 118121454 + 24.9158767863585 NA 3' UTR (NM_019419, exon 6 of 6) 3' UTR (NM_019419, exon 6 of 6) -4143 NM_170669 267019 Mm.288212 NM_170669 ENSMUSG00000008683 Rps15a A630031B11Rik ribosomal protein S15A protein-coding common_peak1_54_700_-0.971979615624708_8.96728082619827_24.9136549905751 chr1 53774216 53774927 + 24.9136549905751 NA intron (NM_133810, intron 2 of 7) intron (NM_133810, intron 2 of 7) 10644 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak1_173_947_0.630666892953951_10.2040766953752_24.9008679954077 chr5 139323733 139325571 + 24.9008679954077 NA intron (NM_172723, intron 1 of 10) intron (NM_172723, intron 1 of 10) 812 NM_172723 231821 Mm.297819 NM_172723 ENSMUSG00000056413 Adap1 4930431P11Rik|Centa1|GC1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding common_peak1_75_936_-0.818316411889583_9.46274703171439_24.8984417397548 chr10 59879280 59880327 + 24.8984417397548 NA exon (NM_019965, exon 1 of 9) exon (NM_019965, exon 1 of 9) 212 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_16_284_-1.75128184807793_7.27917718501314_24.8913865420535 chr2 11187515 11187921 + 24.8913865420535 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 15336 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak2_91_1120_-0.738885136339203_9.76112799463582_24.8814135639092 chr13 23750807 23752981 + 24.8814135639092 NA promoter-TSS (NM_178203) promoter-TSS (NM_178203) -486 NM_178203 319150 NM_178203 ENSMUSG00000069267 Hist1h3b H3-53 histone cluster 1, H3b protein-coding common_peak2_134_1626_-0.597685381954612_10.3691558446952_24.881245549857 chr19 8928542 8930867 + 24.881245549857 NA promoter-TSS (NM_009073) promoter-TSS (NM_009073) 10 NM_144872 225898 Mm.31008 NM_144872 ENSMUSG00000071647 Eml3 BC022146 echinoderm microtubule associated protein like 3 protein-coding common_peak1_32_458_-1.26503039575293_8.20983514553734_24.8764510282363 chr14 54254126 54254674 + 24.8764510282363 NA promoter-TSS (NM_001113358) promoter-TSS (NM_001113358) 271 NM_001205181 105501 Mm.28771 NM_134076 ENSMUSG00000040997 Abhd4 1110035H23Rik|AI429574|Abh4 abhydrolase domain containing 4 protein-coding common_peak2_245_1588_0.498286683056547_10.8830467508768_24.8759954292246 chr14 25643942 25647290 + 24.8759954292246 NA intron (NM_001310666, intron 9 of 23) intron (NM_001310666, intron 9 of 23) 42103 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak2_320_2328_0.417610011298191_11.39429992986_24.8633181519567 chr11 32641681 32644280 + 24.8633181519567 NA intron (NM_001271349, intron 1 of 11) CpG 425 NM_001271347 103583 Mm.28017 NM_134015 ENSMUSG00000020271 Fbxw11 2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS F-box and WD-40 domain protein 11 protein-coding common_peak2_234_1485_0.514018273765741_10.7942275374215_24.8575681259683 chr11 106662374 106667269 + 24.8575681259683 NA intron (NM_001305158, intron 13 of 14) intron (NM_001305158, intron 13 of 14) 50460 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak2_81_275_1.07953111947361_8.64829001651498_24.8539315289979 chr13 117020524 117022470 + 24.8539315289979 NA intron (NM_001081009, intron 3 of 26) intron (NM_001081009, intron 3 of 26) 4019 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding common_peak1_197_2401_-0.481953660705114_10.9890436053531_24.8503726490116 chr4 21847488 21848755 + 24.8503726490116 NA non-coding (NR_028384, exon 1 of 1) non-coding (NR_028384, exon 1 of 1) 327 NR_028384 67735 Mm.391650 NR_028384 4930528A17Rik - RIKEN cDNA 4930528A17 gene ncRNA common_peak2_65_184_1.27255079833092_8.16765685968177_24.8463738503179 chr1 181458828 181460438 + 24.8463738503179 NA 3' UTR (NM_001160212, exon 5 of 5) 3' UTR (NM_001160212, exon 5 of 5) 51818 NM_207280 403180 Mm.220754 NM_207280 ENSMUSG00000050625 Ccdc121 6530421E24Rik|Gm755 coiled-coil domain containing 121 protein-coding common_peak1_65_184_1.27255079833092_8.16765685968177_24.8463738503179 chr6 127330265 127331046 + 24.8463738503179 NA Intergenic Intergenic -22688 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA unique_peak2_18_305_-1.65702363929576_7.42887602304477_24.8445241372229 chr10 89731501 89732788 + 24.8445241372229 NA intron (NM_025914, intron 1 of 10) CpG 151 NM_025914 67019 Mm.335292 NM_025914 ENSMUSG00000019948 Actr6 2010200J04Rik|AU044443|Arp6|ArpX|CDA12 ARP6 actin-related protein 6 protein-coding common_peak2_283_1955_0.452693513267494_11.160037411586_24.8386518323111 chr7 132930394 132932626 + 24.8386518323111 NA Intergenic CpG -18112 NM_207302 360216 Mm.389984 NM_207302 ENSMUSG00000030967 Zranb1 9330160G10Rik|D7Wsu87e|Gm1956|Trabid zinc finger, RAN-binding domain containing 1 protein-coding unique_peak2_9_205_-2.2219786107388_6.57551122181382_24.8253207709789 chr6 142775878 142777188 + 24.8253207709789 NA TTS (NM_009908) TTS (NM_009908) 19847 NM_009908 12764 Mm.3820 NM_009908 ENSMUSG00000030282 Cmas AW208911|CMPNeu5Ac|D6Bwg0250e cytidine monophospho-N-acetylneuraminic acid synthetase protein-coding common_peak2_300_2125_0.435337397988315_11.2715945805253_24.8225381551681 chr15 74987723 74990665 + 24.8225381551681 NA Intergenic Intergenic -5764 NM_020498 57248 Mm.358339 NM_020498 ENSMUSG00000022586 Ly6i AI789751|Ly-6I|Ly-6M lymphocyte antigen 6 complex, locus I protein-coding common_peak1_421_3416_0.348697117896052_11.9128630913773_24.8017032391086 chr11 3201091 3203694 + 24.8017032391086 NA promoter-TSS (NM_001166548) promoter-TSS (NM_001166548) 39 NM_001166548 74203 Mm.255649 NM_023743 ENSMUSG00000020454 Eif4enif1 2610509L04Rik|A930019J01Rik|AA410001|AU021239|Clast4|D11Ertd166e eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding common_peak1_341_2547_0.400095984633513_11.5151975545731_24.7883284124111 chr9 7764016 7765882 + 24.7883284124111 NA intron (NM_133739, intron 1 of 4) intron (NM_133739, intron 1 of 4) 872 NM_133739 71929 Mm.283293 NM_133739 ENSMUSG00000050912 Tmem123 2310075C12Rik transmembrane protein 123 protein-coding common_peak1_49_644_-1.02052784698787_8.82289142681668_24.7717892588066 chr7 80779537 80780221 + 24.7717892588066 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 23452 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_93_1142_-0.728866289602102_9.79417654341343_24.7690855098939 chr7 27195189 27197090 + 24.7690855098939 NA promoter-TSS (NM_001046637) promoter-TSS (NM_001046637) 132 NM_015782 53607 Mm.386890 NM_015782 ENSMUSG00000061479 Snrpa C430021M15Rik|Rnu1a-1|Rnu1a1|U1-A|U1A small nuclear ribonucleoprotein polypeptide A protein-coding common_peak1_17_294_-1.69988578237654_7.35462825306094_24.7620793079176 chr13 23533854 23534308 + 24.7620793079176 NA exon (NM_175661, exon 1 of 1) exon (NM_175661, exon 1 of 1) 170 NM_175661 319173 Mm.377878 NM_175661 ENSMUSG00000061991 Hist1h2af H2a-221 histone cluster 1, H2af protein-coding common_peak2_54_128_1.47006376296266_7.74625913690458_24.741263937577 chr5 115531644 115532837 + 24.741263937577 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 25564 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak1_116_1410_-0.645424306836119_10.1397901191792_24.7377632991933 chr7 80789221 80790620 + 24.7377632991933 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 13411 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_35_489_-1.20534026594355_8.3339678060308_24.7299609898325 chr10 62503485 62504027 + 24.7299609898325 NA intron (NM_011157, intron 1 of 2) B3|SINE|B2 3999 NM_011157 19073 Mm.338790 NM_011157 ENSMUSG00000020077 Srgn Prg|Prg1|Sgc serglycin protein-coding common_peak2_169_915_0.639050370941904_10.1587289735679_24.7182848376443 chr10 42761397 42763199 + 24.7182848376443 NA intron (NM_153055, intron 1 of 20) CpG 802 NM_153055 140740 Mm.214344 NM_153055 ENSMUSG00000019802 Sec63 5730478J10Rik|AI649014|AW319215 SEC63-like (S. cerevisiae) protein-coding common_peak2_442_3655_0.337102292067867_12.004601501092_24.6976046803207 chr16 8828946 8831744 + 24.6976046803207 NA 5' UTR (NM_001081400, exon 1 of 4) 5' UTR (NM_001081400, exon 1 of 4) 245 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak2_76_946_-0.810499074695318_9.48197107812073_24.6972980879475 chr3 79180613 79183453 + 24.6972980879475 NA Intergenic Intergenic -30886 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak1_27_402_-1.36807127851004_7.97060038927295_24.6801952522497 chr17 56764235 56764696 + 24.6801952522497 NA promoter-TSS (NM_144858) promoter-TSS (NM_144858) -286 NM_144858 224907 Mm.293973 NM_144858 ENSMUSG00000007603 Dus3l AI662135|AW557805 dihydrouridine synthase 3-like (S. cerevisiae) protein-coding common_peak2_616_5742_0.271840070584295_12.6235088816782_24.6772553798043 chr7 101462408 101468379 + 24.6772553798043 NA intron (NM_001243757, intron 2 of 30) intron (NM_001243757, intron 2 of 30) -9983 NR_029791 387157 NR_029791 ENSMUSG00000065446 Mir139 Mirn139|mir-139|mmu-mir-139 microRNA 139 ncRNA common_peak1_43_79_1.76448195899294_7.20416907438383_24.6750427034641 chrY 90766653 90767362 + 24.6750427034641 NA Intergenic Intergenic -18435 NM_133362 170942 Mm.76062 NM_133362 ENSMUSG00000096768 Erdr1 edr erythroid differentiation regulator 1 protein-coding common_peak2_297_2097_0.436738350716709_11.2531681379356_24.6746539253276 chr1 86299439 86304808 + 24.6746539253276 NA Intergenic Intergenic -1098 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak1_174_2111_-0.5148428179566_10.7869727103802_24.6714165270747 chr4 137603074 137604971 + 24.6714165270747 NA intron (NM_130879, intron 1 of 27) intron (NM_130879, intron 1 of 27) 9833 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak2_361_2761_0.384322022404668_11.6236586154604_24.6708322102545 chr8 13684376 13690433 + 24.6708322102545 NA Intergenic Intergenic -9817 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_178_2161_-0.508606222311881_10.8238476965787_24.6634749243388 chr11 88046598 88048663 + 24.6634749243388 NA 5' UTR (NM_001078167, exon 1 of 3) 5' UTR (NM_001078167, exon 1 of 3) 257 NM_173374 110809 Mm.391719 NM_173374 ENSMUSG00000018379 Srsf1 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1 serine/arginine-rich splicing factor 1 protein-coding common_peak2_144_716_0.710939592688986_9.8412991050464_24.6429816597943 chr4 129031881 129035889 + 24.6429816597943 NA Intergenic Intergenic -24386 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding common_peak2_81_1002_-0.782050314360399_9.57908073343198_24.641410034142 chr19 8965597 8967059 + 24.641410034142 NA promoter-TSS (NM_026007) promoter-TSS (NM_026007) -713 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding common_peak2_563_5086_0.287890847089384_12.4565448024073_24.627616750718 chr5 37062176 37069379 + 24.627616750718 NA intron (NM_178394, intron 1 of 12) RSINE1|SINE|B4 14920 NM_178394 76071 Mm.85280 NM_178394 ENSMUSG00000063646 Jakmip1 5830437M04Rik|C330021K24Rik|Gababrbp|Marlin-1 janus kinase and microtubule interacting protein 1 protein-coding common_peak2_67_844_-0.866046647822664_9.28978420725822_24.6227031170399 chr14 57570911 57572423 + 24.6227031170399 NA promoter-TSS (NM_026526) promoter-TSS (NM_026526) -98 NM_026526 68043 Mm.45225 NM_026526 ENSMUSG00000021951 Eef1akmt1 2510005D08Rik|AW045965|Ayu21-96|Gt(pU21)96Imeg|GtAyu21-96|N6amt2 eukaryotic translation elongation factor 1 alpha lysine methyltransferase 1 protein-coding common_peak2_145_1756_-0.56996713843639_10.4939149067902_24.6215237791838 chr10 81319391 81321940 + 24.6215237791838 NA promoter-TSS (NM_027381) promoter-TSS (NM_027381) -438 NM_027381 70312 Mm.87628 NM_027381 ENSMUSG00000034889 Cactin 2510012J08Rik cactin, spliceosome C complex subunit protein-coding unique_peak2_39_533_-1.14294939287042_8.48922123525234_24.619378171286 chr18 11926839 11928720 + 24.619378171286 NA intron (NM_022021, intron 6 of 8) intron (NM_022021, intron 6 of 8) -87341 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA common_peak1_190_1094_0.587656351498259_10.3905433302377_24.6151278745878 chr7 66374920 66377426 + 24.6151278745878 NA intron (NM_146191, intron 2 of 33) intron (NM_146191, intron 2 of 33) 5551 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_46_610_-1.05189748239271_8.72907982862237_24.6149059609841 chr4 138327602 138328391 + 24.6149059609841 NA Intergenic RMER19B|LTR|ERVK -1700 NM_026880 68943 Mm.18539 NM_026880 ENSMUSG00000028756 Pink1 1190006F07Rik|AU042772|AW557854|BRPK|mFLJ00387 PTEN induced putative kinase 1 protein-coding common_peak2_41_555_-1.11485411773865_8.56151401385418_24.6133090602102 chr7 46389938 46392550 + 24.6133090602102 NA Intergenic RLTR17B_Mm|LTR|ERVK -5224 NM_008421 16502 Mm.249386 NM_008421 ENSMUSG00000058975 Kcnc1 C230009H10Rik|KShIIIB|KV4|Kcr2-1|Kv3.1|NGK2|Shaw potassium voltage gated channel, Shaw-related subfamily, member 1 protein-coding common_peak1_184_2234_-0.498169877980949_10.8769741770802_24.6104177584325 chr4 155600754 155602470 + 24.6104177584325 NA 5' UTR (NM_177186, exon 1 of 9) 5' UTR (NM_177186, exon 1 of 9) 196 NM_177186 320541 Mm.306018 NM_177186 ENSMUSG00000042202 Slc35e2 A530082C11Rik|AI957035 solute carrier family 35, member E2 protein-coding common_peak2_269_1821_0.46561822110222_11.0641163543532_24.5899707451669 chr5 148550076 148553359 + 24.5899707451669 NA intron (NM_011908, intron 1 of 4) A-rich|Low_complexity|Low_complexity 1071 NM_011908 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG ubiquitin-like 3 protein-coding common_peak2_60_765_-0.916681130877985_9.12286001648597_24.5895983133068 chr7 30094499 30095996 + 24.5895983133068 NA intron (NM_011981, intron 1 of 2) intron (NM_011981, intron 1 of 2) 171 NM_011981 26466 Mm.195092 NM_011981 ENSMUSG00000049421 Zfp260 AI480997|Ozrf1|PEX1|Zfp63|Znf260 zinc finger protein 260 protein-coding common_peak2_40_543_-1.12601957618491_8.52445305315788_24.5763876362405 chr6 145100260 145102390 + 24.5763876362405 NA Intergenic Intergenic -14311 NM_001281980 16970 Mm.843 NM_008511 ENSMUSG00000030263 Lrmp D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1 lymphoid-restricted membrane protein protein-coding common_peak1_113_1373_-0.653055258081569_10.0976386597773_24.5659662753799 chr18 65380880 65381925 + 24.5659662753799 NA intron (NM_001037294, intron 1 of 12) intron (NM_001037294, intron 1 of 12) 12486 NM_001037294 225638 Mm.296528 NM_001037294 ENSMUSG00000032845 Alpk2 Gm549|Hak alpha-kinase 2 protein-coding common_peak1_134_1622_-0.594134130830057_10.3673802191329_24.5595932859431 chr7 127287364 127288858 + 24.5595932859431 NA Intergenic Intergenic -8149 NM_001253873 16408 Mm.1618 NM_008400 ENSMUSG00000030830 Itgal (p180)|Cd11a|LFA-1|LFA-1A|Ly-15|Ly-21 integrin alpha L protein-coding common_peak1_344_2583_0.395310552431189_11.5330456309095_24.5471968058199 chr10 14084545 14087587 + 24.5471968058199 NA intron (NM_010437, intron 2 of 8) intron (NM_010437, intron 2 of 8) 119687 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding unique_peak1_36_52_2.05186319664821_6.7538520528873_24.5436105688597 chr4 141998419 141998984 + 24.5436105688597 NA intron (NM_177868, intron 2 of 31) intron (NM_177868, intron 2 of 31) 12950 NM_177868 329977 Mm.252019 NM_028429 ENSMUSG00000051435 Fhad1 2900090M10Rik|B230311F11 forkhead-associated (FHA) phosphopeptide binding domain 1 protein-coding common_peak1_87_1070_-0.751720399683593_9.68888256490846_24.5413504994359 chr15 75116757 75117820 + 24.5413504994359 NA Intergenic RMER10B|LTR|ERVL -5339 NM_001099217 100041546 Mm.482110 NM_001099217 ENSMUSG00000022584 Ly6c2 Ly-6C.2|Ly-6C2 lymphocyte antigen 6 complex, locus C2 protein-coding common_peak1_265_3269_-0.404562296536728_11.4727937721171_24.53493121706 chr10 42276812 42278714 + 24.53493121706 NA Intergenic CpG-1005 -1021 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding unique_peak1_24_15_3.08601519213638_5.54300759606819_24.5337007238414 chr6 131289488 131289999 + 24.5337007238414 NA intron (NM_025564, intron 1 of 4) PB1D9|SINE|Alu 3501 NM_025564 66441 Mm.46623 NM_025564 ENSMUSG00000030188 Magohb 2010012C16Rik|Mago|Magoh|Magoh-rs1 mago homolog B, exon junction complex core component protein-coding common_peak1_34_477_-1.21942109345721_8.29115626125214_24.5253518413444 chr13 114915050 114915843 + 24.5253518413444 NA intron (NM_008396, intron 1 of 29) intron (NM_008396, intron 1 of 29) 16595 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_69_207_1.2076183075688_8.30424887192549_24.5210141067718 chr13 114903445 114904966 + 24.5210141067718 NA intron (NM_008396, intron 1 of 29) intron (NM_008396, intron 1 of 29) 27836 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak2_362_2774_0.382429304663901_11.6294867084568_24.5172865112995 chr4 107177564 107180132 + 24.5172865112995 NA promoter-TSS (NM_025617) promoter-TSS (NM_025617) 218 NM_029565 56374 Mm.291192 NM_029565 ENSMUSG00000028618 Tmem59 1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18 transmembrane protein 59 protein-coding common_peak2_184_1043_0.599983241519846_10.3278976173298_24.5055195135431 chr1 128243705 128245330 + 24.5055195135431 NA exon (NM_026390, exon 1 of 13) exon (NM_026390, exon 1 of 13) 336 NM_026390 67812 Mm.293321 NM_026390 ENSMUSG00000026353 Ubxn4 1300013G12Rik|Ubxd2|mKIAA0242 UBX domain protein 4 protein-coding common_peak1_566_5126_0.285979009861052_12.4668886873278_24.4969176316631 chr4 32137201 32141476 + 24.4969176316631 NA Intergenic MTD|LTR|ERVL-MaLR 175231 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_218_2661_-0.451841313372977_11.1523741992254_24.4948860770954 chr13 23542455 23545809 + 24.4948860770954 NA promoter-TSS (NM_013548) promoter-TSS (NM_013548) 80 NM_013548 260423 Mm.221389 NM_013548 ENSMUSG00000100210 Hist1h3f H3.2-221|Hist1 histone cluster 1, H3f protein-coding common_peak1_48_101_1.60445089493919_7.47465078944109_24.4939532631673 chr11 119352891 119353978 + 24.4939532631673 NA intron (NM_018822, intron 1 of 7) intron (NM_018822, intron 1 of 7) 2076 NM_018822 27029 Mm.103788 NM_018822 ENSMUSG00000005043 Sgsh 4632406A19Rik N-sulfoglucosamine sulfohydrolase (sulfamidase) protein-coding common_peak2_72_899_-0.831462164831409_9.39805010880133_24.4930627339249 chr13 24720580 24723485 + 24.4930627339249 NA intron (NM_001286100, intron 20 of 22) B2_Mm2|SINE|B2 39905 NM_020567 57441 Mm.12239 NM_020567 ENSMUSG00000006715 Gmnn AW546347|Gem geminin protein-coding common_peak1_177_984_0.615650765606805_10.2518052971471_24.4894085538672 chr12 82168854 82170781 + 24.4894085538672 NA promoter-TSS (NM_001167983) promoter-TSS (NM_001167983) -199 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak1_46_609_-1.04953434502423_8.72789825993813_24.4853108531538 chr11 34008154 34009007 + 24.4853108531538 NA Intergenic Intergenic -15387 NM_001190886 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding unique_peak2_15_271_-1.79120957812517_7.19185805218775_24.4849309943696 chr11 119040379 119040999 + 24.4849309943696 NA intron (NM_013926, intron 1 of 4) intron (NM_013926, intron 1 of 4) 224 NM_013926 30951 Mm.99953 NM_013926 ENSMUSG00000025578 Cbx8 Pc3 chromobox 8 protein-coding common_peak2_124_566_0.786915854072475_9.54066285197847_24.4654183121233 chr14 30715029 30717027 + 24.4654183121233 NA intron (NM_001166532, intron 1 of 20) CpG 413 NM_001166532 54650 Mm.294662 NM_019460 ENSMUSG00000006527 Sfmbt1 4930442N21Rik|9330180L21Rik|AA536974|Sfmbt|Smr Scm-like with four mbt domains 1 protein-coding common_peak2_82_1012_-0.774912589632789_9.59696216398474_24.4624723016598 chr1 97580273 97581817 + 24.4624723016598 NA Intergenic MTB_Mm|LTR|ERVL-MaLR 80973 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak1_90_1104_-0.737485611558746_9.74108784849942_24.4553757139014 chr17 6960777 6961841 + 24.4553757139014 NA promoter-TSS (NM_147155) promoter-TSS (NM_147155) -153 NM_147155 380608 Mm.371734 NM_147155 ENSMUSG00000052031 Tagap1 2610315E15Rik|AA415005|FKSG15 T cell activation GTPase activating protein 1 protein-coding common_peak1_522_4594_0.301082359749879_12.3163903260513_24.4519557942822 chr10 99260774 99264373 + 24.4519557942822 NA promoter-TSS (NM_026268) promoter-TSS (NM_026268) -658 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak2_156_1887_-0.545167414956191_10.6100593418837_24.4469439579814 chr7 25236984 25240069 + 24.4469439579814 NA promoter-TSS (NM_001031667) promoter-TSS (NM_001031667) -675 NM_001031667 606496 Mm.491101 NM_001031667 ENSMUSG00000057177 Gsk3a 2700086H06Rik glycogen synthase kinase 3 alpha protein-coding common_peak2_291_3611_-0.383038528722517_11.6270629131196_24.4401739098408 chr10 44446630 44453377 + 24.4401739098408 NA intron (NM_007548, intron 3 of 6) intron (NM_007548, intron 3 of 6) 8745 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding common_peak1_32_455_-1.25557006650386_8.20510498091281_24.428759193074 chr12 84761952 84762536 + 24.428759193074 NA intron (NM_023409, intron 2 of 3) intron (NM_023409, intron 2 of 3) 10868 NM_023409 67963 Mm.282556 NM_023409 ENSMUSG00000021242 Npc2 2700012J19Rik|AA408070|AU045843|HE1 Niemann-Pick type C2 protein-coding common_peak2_975_10580_0.201780334644987_13.4700785284699_24.4219291999109 chr10 80691361 80703574 + 24.4219291999109 NA intron (NM_172457, intron 1 of 3) intron (NM_172457, intron 1 of 3) 4353 NM_172457 208228 Mm.49309 NM_172457 ENSMUSG00000003348 Mob3a 5330417K06Rik|A630029F06|AV218468|Mobkl2a MOB kinase activator 3A protein-coding common_peak1_222_1380_0.526986269696353_10.6949907391062_24.4101107358926 chr1 182340809 182342525 + 24.4101107358926 NA promoter-TSS (NM_175127) promoter-TSS (NM_175127) -61 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_477_4064_0.318677188316542_12.1483782311207_24.4095576544374 chr8 106051542 106056300 + 24.4095576544374 NA TTS (NM_001301176) TTS (NM_001301176) -5682 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding common_peak1_280_1931_0.451712108365287_11.1417354330184_24.40316960302 chr18 35872876 35875482 + 24.40316960302 NA Intergenic Intergenic 44361 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_91_1115_-0.732435885362964_9.75790336914771_24.3986855451436 chr7 145110365 145112691 + 24.3986855451436 NA Intergenic Intergenic 96591 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak1_17_292_-1.69007149254958_7.34972110814746_24.3949472291439 chr6 48732938 48733467 + 24.3949472291439 NA Intergenic Intergenic -5845 NM_175860 16205 Mm.252599 NM_008376 ENSMUSG00000090019 Gimap1 IAP38|Imap38|imap GTPase, IMAP family member 1 protein-coding common_peak1_31_444_-1.27479595154224_8.16026355008264_24.3937291703309-2 chrX 151802494 151803161 + 24.3937291703309 NA promoter-TSS (NM_021523) promoter-TSS (NM_021523) -455 NM_021523 59026 Mm.27372 NM_021523 ENSMUSG00000025261 Huwe1 5430439H10Rik|AU041296|Arf-bp1|C430014N20Rik|C80292|Gm1718|Ib772|LASU1|Mule|Ureb1 HECT, UBA and WWE domain containing 1 protein-coding common_peak1_31_444_-1.27479595154224_8.16026355008264_24.3937291703309 chr6 136554290 136555081 + 24.3937291703309 NA intron (NM_019426, intron 1 of 14) intron (NM_019426, intron 1 of 14) 35834 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_26_389_-1.38512274691002_7.9147689402946_24.3894522634977 chr8 109565986 109566423 + 24.3894522634977 NA promoter-TSS (NM_178380) promoter-TSS (NM_178380) 218 NM_175646 234723 Mm.37667 NM_175646 ENSMUSG00000031723 Txnl4b AI595343|D530025J19Rik|DLP|Dim2 thioredoxin-like 4B protein-coding common_peak1_24_368_-1.44146181392401_7.80674609909839_24.3884462519698 chr3 38393912 38394540 + 24.3884462519698 NA Intergenic Intergenic 90590 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding common_peak1_28_411_-1.33783721267065_8.01758192084789_24.352389579262 chr19 21914185 21914708 + 24.352389579262 NA Intergenic Intergenic 136106 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak2_229_1445_0.515326865207067_10.7555152695546_24.3487495988922 chr11 117348360 117351353 + 24.3487495988922 NA intron (NM_001113488, intron 1 of 9) intron (NM_001113488, intron 1 of 9) 17543 NM_001113488 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_899_9510_0.212127526094578_13.3214450837684_24.3472122763807 chr8 88287641 88295882 + 24.3472122763807 NA intron (NM_001037723, intron 1 of 27) intron (NM_001037723, intron 1 of 27) -2443 NM_001037724 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding unique_peak1_29_29_2.50176583698918_6.15777351410311_24.320095500641 chr13 43295093 43295712 + 24.320095500641 NA intron (NM_001033399, intron 1 of 1) RSINE1|SINE|B4 8770 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak1_267_1805_0.465186145041578_11.0511752500016_24.3189137895737 chr12 86241252 86243307 + 24.3189137895737 NA intron (NM_027405, intron 1 of 9) intron (NM_027405, intron 1 of 9) 401 NM_027405 70373 Mm.252967 NM_027405 ENSMUSG00000021254 Gpatch2l 1700020O03Rik|4732487G21Rik|A630090I05Rik|Kiaa1152 G patch domain containing 2 like protein-coding common_peak2_241_1557_0.497699637760135_10.8543293369417_24.3156214295219 chr12 35046194 35048378 + 24.3156214295219 NA promoter-TSS (NM_001014973) promoter-TSS (NM_001014973) 97 NM_001014973 217463 Mm.213991 NM_001014973 ENSMUSG00000020590 Snx13 Rgs-px1|mKIAA0713 sorting nexin 13 protein-coding common_peak2_153_1849_-0.549975703444252_10.5783217036815_24.3154540144857 chr2 25425716 25429348 + 24.3154540144857 NA Intergenic MER54A|LTR|ERVL -1142 NM_007379 11305 Mm.2210 NM_007379 ENSMUSG00000026944 Abca2 AI413825|Abc2|D2H0S1474E|mKIAA1062 ATP-binding cassette, sub-family A (ABC1), member 2 protein-coding unique_peak2_42_563_-1.09382418214484_8.59263926132637_24.315443004764 chr7 58474063 58476371 + 24.315443004764 NA Intergenic Intergenic -182985 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_322_2357_0.410748443011556_11.4087222244855_24.3139434123705 chr3 87764375 87769909 + 24.3139434123705 NA intron (NM_001289601, intron 1 of 24) intron (NM_001289601, intron 1 of 24) 1811 NM_001032413 73182 Mm.158962 NM_028460 ENSMUSG00000028073 Pear1 3110045G13Rik|Jedi-1|Megf12 platelet endothelial aggregation receptor 1 protein-coding common_peak2_187_1071_0.590266519340959_10.3612224501283_24.3119709119403 chr1 144329137 144332405 + 24.3119709119403 NA Intergenic Intergenic -81667 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak2_118_524_0.810898757686159_9.44162299139656_24.2930484721281 chr19 36347669 36349546 + 24.2930484721281 NA Intergenic CpG -30460 NM_029508 76073 Mm.259180 NM_029508 ENSMUSG00000024805 Pcgf5 0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127 polycomb group ring finger 5 protein-coding common_peak1_205_1228_0.554890994590435_10.5407146976679_24.2829380752242 chr11 5740373 5741931 + 24.2829380752242 NA promoter-TSS (NM_178623) promoter-TSS (NM_178623) 24 NM_178623 72046 Mm.271657 NM_178623 ENSMUSG00000049680 Urgcp 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 upregulator of cell proliferation protein-coding common_peak2_178_995_0.609542653354687_10.2647732587454_24.2746447878827 chr9 7183726 7185671 + 24.2746447878827 NA 5' UTR (NM_029775, exon 1 of 8) 5' UTR (NM_029775, exon 1 of 8) 132 NM_029775 76863 Mm.27293 NM_029775 ENSMUSG00000032002 Dcun1d5 3110001A18Rik|4833420K19Rik|AW060460|D430047L21Rik DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) protein-coding common_peak1_41_72_1.81426239610484_7.09695575693244_24.2632005827663 chr10 41751707 41752279 + 24.2632005827663 NA intron (NM_001243075, intron 1 of 9) RMER13A|LTR|ERVK 57670 NM_001243075 103268 Mm.338605 NM_026643 ENSMUSG00000019813 Cep57l1 2410017P07Rik|4930484D11Rik|AI607327|cep57R centrosomal protein 57-like 1 protein-coding common_peak2_94_1148_-0.717693292370901_9.80731643646066_24.2419094502664 chrX 8144691 8146567 + 24.2419094502664 NA non-coding (NR_033561, exon 1 of 3) non-coding (NR_033561, exon 1 of 3) 202 NR_033561 70226 Mm.391639 NR_033561 ENSMUSG00000055188 Rbm3os 2900002K06Rik RNA binding motif protein 3, opposite strand ncRNA common_peak1_94_1148_-0.717693292370901_9.80731643646066_24.2419094502664 chr13 21832762 21834329 + 24.2419094502664 NA promoter-TSS (NM_001110555) promoter-TSS (NM_001110555) 30 NM_001177544 665433 Mm.250564 NM_001177544 ENSMUSG00000094248 Hist1h2ao - histone cluster 1, H2ao protein-coding common_peak1_257_1710_0.475849953104175_10.9785490210415_24.2418890763981 chr8 11007842 11010032 + 24.2418890763981 NA promoter-TSS (NM_001081212) promoter-TSS (NM_001081212) -507 NM_001081212 384783 Mm.407207 NM_001081212 ENSMUSG00000038894 Irs2 Irs-2 insulin receptor substrate 2 protein-coding common_peak1_135_650_0.736859461367606_9.71494346384944_24.2384239356038 chr8 19784560 19785588 + 24.2384239356038 NA intron (NM_001270553, intron 6 of 9) CpG 55498 NM_001039553 626415 Mm.425517 NM_001039553 ENSMUSG00000096265 4930467E23Rik ENSMUSG00000074453|OTTMUSG00000018948|TSAP RIKEN cDNA 4930467E23 gene protein-coding common_peak2_50_651_-1.00105737710362_8.84819946567927_24.2305081861735 chr8 70760034 70762003 + 24.2305081861735 NA promoter-TSS (NM_183170) promoter-TSS (NM_183170) -97 NM_183170 234384 Mm.213010 NM_183170 ENSMUSG00000035559 Mpv17l2 Fksg24 MPV17 mitochondrial membrane protein-like 2 protein-coding common_peak2_512_4480_0.303162740704236_12.2811863815046_24.2183463770573 chr5 43232326 43235988 + 24.2183463770573 NA exon (NM_001177379, exon 1 of 11) exon (NM_001177379, exon 1 of 11) 694 NM_001177379 231207 Mm.7233 NM_175937 ENSMUSG00000039782 Cpeb2 A630055H10Rik|Cpe-bp2 cytoplasmic polyadenylation element binding protein 2 protein-coding common_peak1_106_440_0.874335573798252_9.22180263245665_24.2182192317868 chr10 58351048 58352649 + 24.2182192317868 NA intron (NM_026148, intron 1 of 9) intron (NM_026148, intron 1 of 9) -19606 NM_201242 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak2_262_1758_0.469901251803501_11.0154903933737_24.2062511095852 chr3 5575008 5577429 + 24.2062511095852 NA promoter-TSS (NM_001163306) promoter-TSS (NM_001163306) 30 NM_001163301 19302 Mm.132336 NM_008994 ENSMUSG00000040374 Pex2 D3Ertd138e|PAF-1|PMP35|Pxmp3 peroxisomal biogenesis factor 2 protein-coding common_peak1_65_817_-0.872024774094513_9.23994464589449_24.1675260736885 chr4 139203673 139204384 + 24.1675260736885 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 9917 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_564_5109_0.284517509225736_12.4613663304379_24.1605639573657 chr1 87619701 87622930 + 24.1605639573657 NA intron (NR_122078, intron 1 of 27) intron (NR_122078, intron 1 of 27) 1003 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak2_260_1740_0.471231859168036_11.0013164172351_24.1532749484368 chr6 119386693 119389708 + 24.1532749484368 NA intron (NM_197985, intron 1 of 7) CpG 29283 NM_197985 68465 Mm.291826 NM_197985 ENSMUSG00000030168 Adipor2 1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2 adiponectin receptor 2 protein-coding common_peak2_293_2064_0.435696997943515_11.2297745652786_24.1507700394727 chr3 139073692 139076434 + 24.1507700394727 NA 5' UTR (NM_001040690, exon 1 of 15) 5' UTR (NM_001040690, exon 1 of 15) 138 NM_145544 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding common_peak1_461_3883_0.324140882693515_12.0853979267659_24.1500565725471 chr5 31697104 31700225 + 24.1500565725471 NA intron (NM_181280, intron 1 of 12) intron (NM_181280, intron 1 of 12) 614 NM_181282 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Bre 6030405P19Rik|AI429776|B830038C02Rik brain and reproductive organ-expressed protein protein-coding common_peak1_105_1274_-0.673927455116752_9.97931780418784_24.1465857095506 chr1 40474012 40475140 + 24.1465857095506 NA intron (NM_001161843, intron 3 of 9) intron (NM_001161843, intron 3 of 9) 8570 NM_008365 16182 Mm.253664 NM_008365 ENSMUSG00000026070 Il18r1 Il18ralpha|Il1rrp interleukin 18 receptor 1 protein-coding common_peak1_252_1663_0.48140249908027_10.9411409676812_24.141062193529 chr12 73592287 73595354 + 24.141062193529 NA intron (NM_008856, intron 1 of 13) intron (NM_008856, intron 1 of 13) 9024 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_32_453_-1.24922853963003_8.2019342174759_24.1317072796779 chrX 74246608 74247399 + 24.1317072796779 NA promoter-TSS (NM_010227) promoter-TSS (NM_010227) -469 NM_001290421 192176 Mm.295533 NM_010227 ENSMUSG00000031328 Flna ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1 filamin, alpha protein-coding unique_peak1_22_11_3.35349830337235_5.26171165240733_24.1206546775397 chr10 79946278 79946810 + 24.1206546775397 NA exon (NM_007880, exon 4 of 9) exon (NM_007880, exon 4 of 9) -13608 NM_175450 216156 Mm.35828 NM_175450 ENSMUSG00000035754 Wdr18 2310012I10Rik|AU044733|AW122032 WD repeat domain 18 protein-coding common_peak2_181_2190_-0.498416415083819_10.8481655614483_24.1187373138939 chr7 127776076 127778231 + 24.1187373138939 NA promoter-TSS (NM_178029) promoter-TSS (NM_178029) -236 NM_178029 233904 Mm.435494 NM_010940 ENSMUSG00000042308 Setd1a BC010250|KMT2F|Nsccn1|mKIAA0339|mNSC1 SET domain containing 1A protein-coding common_peak1_62_171_1.29534440524968_8.07393695732694_24.1145734422818 chr13 34993531 34994258 + 24.1145734422818 NA 5' UTR (NM_011868, exon 1 of 10) 5' UTR (NM_011868, exon 1 of 10) 250 NM_011868 23986 Mm.491141 NM_011868 ENSMUSG00000021417 Eci2 Acbd2|Drs1|Hca88|Peci enoyl-Coenzyme A delta isomerase 2 protein-coding common_peak1_47_616_-1.02873889987097_8.75475722921393_24.1008001388033 chr10 19576640 19577591 + 24.1008001388033 NA Intergenic A-rich|Low_complexity|Low_complexity -14843 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_218_1347_0.529848761357055_10.6615291618604_24.0933466460243 chr12 59060432 59061761 + 24.0933466460243 NA intron (NM_001306218, intron 1 of 6) CpG 376 NM_001306218 78232 Mm.290070 NM_030057 ENSMUSG00000020993 Trappc6b 5830498C14Rik|C79212 trafficking protein particle complex 6B protein-coding common_peak1_129_1557_-0.601952686542417_10.3045031747905_24.0749100436065 chr6 54954590 54956081 + 24.0749100436065 NA intron (NM_172729, intron 1 of 11) intron (NM_172729, intron 1 of 11) 16326 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak1_67_839_-0.85748463431924_9.2855032005065_24.0711687850778 chr7 16310407 16311457 + 24.0711687850778 NA intron (NM_133234, intron 1 of 3) intron (NM_133234, intron 1 of 3) 1349 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak1_252_1664_0.480535755262737_10.94157433959_24.0625232205668 chr7 45717307 45719209 + 24.0625232205668 NA promoter-TSS (NM_203280) promoter-TSS (NM_203280) 187 NM_009077 19899 Mm.3459 NM_009077 ENSMUSG00000059070 Rpl18 L18|Rpl18a ribosomal protein L18 protein-coding common_peak2_727_7185_0.241208756276949_12.9315775981406_24.0596320226811 chr19 12793689 12799563 + 24.0596320226811 NA promoter-TSS (NM_053009) promoter-TSS (NM_053009) -503 NM_053009 109910 Mm.290924 NM_053009 ENSMUSG00000024695 Zfp91 9130014I08Rik|A530054C17Rik|AL024263|AW545902|Pzf|Zfp-91 zinc finger protein 91 protein-coding common_peak2_75_928_-0.80594596061305_9.45656180607613_24.0568354222311 chr6 117873662 117876286 + 24.0568354222311 NA Intergenic Intergenic 11897 NM_001001792 22685 Mm.249661 NM_008616 ENSMUSG00000042097 Zfp239 Mok-2|Mok2|Znf239 zinc finger protein 239 protein-coding common_peak1_152_784_0.675256449501751_9.95417706852987_24.0509468995175 chr1 74294961 74296619 + 24.0509468995175 NA intron (NM_027154, intron 1 of 11) intron (NM_027154, intron 1 of 11) 8546 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding common_peak1_59_156_1.34064799489243_7.96494474633784_24.0481379625832 chr1 171391112 171392426 + 24.0481379625832 NA intron (NM_001005508, intron 1 of 11) intron (NM_001005508, intron 1 of 11) 2809 NM_001005508 226652 Mm.251048 NM_001005508 ENSMUSG00000048865 Arhgap30 6030405P05Rik|Gm102|mFLJ00267 Rho GTPase activating protein 30 protein-coding common_peak1_59_156_1.34064799489243_7.96494474633784_24.0481379625832-2 chr12 111943881 111944805 + 24.0481379625832 NA non-coding (NR_029464, exon 1 of 3) non-coding (NR_029464, exon 1 of 3) 139 NR_029464 77675 Mm.98331 NR_029464 5033406O09Rik 9130204G15Rik RIKEN cDNA 5033406O09 gene ncRNA common_peak1_29_420_-1.30901999046869_8.06316642783205_24.0470591699728 chr16 78540076 78540680 + 24.0470591699728 NA TTS (NM_001252440) TTS (NM_001252440) -19938 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak1_38_517_-1.14386483807869_8.44487586864721_24.0400854627251 chr13 23574362 23575024 + 24.0400854627251 NA promoter-TSS (NM_178195) promoter-TSS (NM_178195) 312 NM_178188 319165 Mm.390553 NM_178188 ENSMUSG00000071478 Hist1h2ad - histone cluster 1, H2ad protein-coding common_peak2_496_4294_0.308253239086662_12.2225690355692_24.0347017671031 chr4 134749324 134756369 + 24.0347017671031 NA intron (NM_145554, intron 4 of 8) intron (NM_145554, intron 4 of 8) 15158 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak1_36_496_-1.17731839035088_8.36844284638685_24.0126842386735 chr8 122702408 122703118 + 24.0126842386735 NA Intergenic Intergenic -3654 NM_009824 12398 Mm.194339 NM_009824 ENSMUSG00000006362 Cbfa2t3 A630044F12Rik|AI465270|AW229127|Cbfa2t3h|ETO-2|Eto2|MTGR2 core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) protein-coding common_peak1_147_1771_-0.558154614970894_10.5120855810696_24.0028311688271 chr7 127840693 127842568 + 24.0028311688271 NA promoter-TSS (NM_009294) promoter-TSS (NM_009294) -178 NM_009294 20909 Mm.24867 NM_009294 ENSMUSG00000030805 Stx4a Stx4|Syn-4|Syn4 syntaxin 4A (placental) protein-coding common_peak1_148_1783_-0.555974897812684_10.522912451014_23.9936334915848 chr7 27472500 27474695 + 23.9936334915848 NA promoter-TSS (NM_133210) promoter-TSS (NM_133210) -243 NM_133210 170742 Mm.200120 NM_133210 ENSMUSG00000055200 Sertad3 AW124805|D1Mgi51|Rbt1|Sei3 SERTA domain containing 3 protein-coding common_peak1_47_98_1.61103115919884_7.43487219967903_23.9912839209956 chr12 102663230 102664263 + 23.9912839209956 NA intron (NM_172584, intron 2 of 9) PB1D10|SINE|Alu 21274 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA unique_peak2_0_95_-5.19515848234141_3.98738325955045_23.9769204194692 chr2 149283106 149283969 + 23.9769204194692 NA Intergenic ERVB4_3-LTR_MM|LTR|ERVK -121712 NM_021405 58214 Mm.117117 NM_021405 ENSMUSG00000033156 Cst10 DD72 cystatin 10 (chondrocytes) protein-coding common_peak1_66_826_-0.861199819021552_9.2611436096605_23.9707238039024 chr13 23683283 23684034 + 23.9707238039024 NA promoter-TSS (NM_001290380) promoter-TSS (NM_001290380) 301 NM_178189 319164 Mm.261973 NM_178189 ENSMUSG00000069270 Hist1h2ac - histone cluster 1, H2ac protein-coding common_peak2_465_3933_0.320942629781674_12.1022525571694_23.9705672297498 chr5 31696612 31700392 + 23.9705672297498 NA promoter-TSS (NM_153196) promoter-TSS (NM_153196) 452 NM_181282 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Bre 6030405P19Rik|AI429776|B830038C02Rik brain and reproductive organ-expressed protein protein-coding common_peak2_131_1579_-0.595164273030875_10.328126706549_23.9658610937194 chr11 106478604 106482593 + 23.9658610937194 NA intron (NM_023913, intron 1 of 21) intron (NM_023913, intron 1 of 21) 7198 NM_023913 78943 Mm.340943 NM_023913 ENSMUSG00000020715 Ern1 9030414B18Rik|AI225830|C85377|Ire1a|Ire1alpha|Ire1p endoplasmic reticulum (ER) to nucleus signalling 1 protein-coding common_peak2_71_882_-0.828359643403086_9.37208980594692_23.9546882465287 chr8 122348757 122351171 + 23.9546882465287 NA Intergenic Intergenic 10782 NM_133202 170732 Mm.154808 NM_133202 ENSMUSG00000039079 Trhr2 TRH-R2 thyrotropin releasing hormone receptor 2 protein-coding common_peak1_22_344_-1.49199174757202_7.68445667787952_23.945487698021 chrX 136992161 136992672 + 23.945487698021 NA promoter-TSS (NM_001035509) promoter-TSS (NM_001035509) 616 NM_001114179 67062 Mm.276518 NM_001082412 ENSMUSG00000044348 Slc25a53 2310046F18Rik|2810402A17Rik|AI448995|AI841128|Mcart6 solute carrier family 25, member 53 protein-coding common_peak1_51_117_1.49939050646545_7.63233830259457_23.9410033925228 chr14 25613674 25614816 + 23.9410033925228 NA intron (NM_001310666, intron 6 of 23) intron (NM_001310666, intron 6 of 23) 10732 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak1_75_244_1.11695088676703_8.49511338238609_23.9387655137688 chr2 104848636 104849895 + 23.9387655137688 NA intron (NM_178695, intron 1 of 5) intron (NM_178695, intron 1 of 5) 585 NM_178695 228413 Mm.259609 NM_178695 ENSMUSG00000027171 Prrg4 9930111I18Rik|TMG4 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) protein-coding common_peak2_120_541_0.794417803281577_9.47935794299466_23.9343147104813 chr4 109656137 109658088 + 23.9343147104813 NA Intergenic Intergenic 8260 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) protein-coding common_peak2_154_801_0.667329365157707_9.98112310903377_23.9212079782169 chr3 94581735 94583070 + 23.9212079782169 NA exon (NM_029721, exon 1 of 12) exon (NM_029721, exon 1 of 12) 314 NM_001082484 76742 Mm.28160 NM_029721 ENSMUSG00000028136 Snx27 5730552M22Rik|ESTM45|ESTM47|R75405 sorting nexin family member 27 protein-coding common_peak2_233_1487_0.50453146583947_10.7914245440278_23.9199749829786 chr2 15054087 15056463 + 23.9199749829786 NA promoter-TSS (NM_029466) promoter-TSS (NM_029466) -87 NM_029466 75869 Mm.174068 NM_029466 ENSMUSG00000017418 Arl5b 4930587A11Rik|AW146430|Arl8 ADP-ribosylation factor-like 5B protein-coding common_peak2_128_600_0.758640505696047_9.61054143355921_23.9185901482883 chr18 75278021 75280115 + 23.9185901482883 NA intron (NM_027727, intron 16 of 16) intron (NM_027727, intron 16 of 16) 18249 NR_045394 100503117 Mm.250517 NR_045393 ENSMUSG00000102047 2010010A06Rik 5033420E22Rik RIKEN cDNA 2010010A06 gene ncRNA common_peak1_111_477_0.83892256440989_9.32032809018569_23.9176516355448 chr4 132048419 132049742 + 23.9176516355448 NA promoter-TSS (NM_001128606) promoter-TSS (NM_001128606) -2 NM_001128606 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding common_peak1_278_1918_0.448812240845493_11.1305451166181_23.9146594057612 chr7 132930398 132932324 + 23.9146594057612 NA Intergenic CpG -18261 NM_207302 360216 Mm.389984 NM_207302 ENSMUSG00000030967 Zranb1 9330160G10Rik|D7Wsu87e|Gm1956|Trabid zinc finger, RAN-binding domain containing 1 protein-coding common_peak1_202_2449_-0.466366610111894_11.025382728834_23.9058319615926 chr17 79354290 79356649 + 23.9058319615926 NA promoter-TSS (NM_026514) promoter-TSS (NM_026514) -378 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak2_163_1965_-0.526379718902442_10.6778577468894_23.9051071179664 chr13 22040531 22044143 + 23.9051071179664 NA promoter-TSS (NM_175656) promoter-TSS (NM_175656) 612 NM_178186 319167 Mm.263165 NM_178186 ENSMUSG00000069301 Hist1h2ag - histone cluster 1, H2ag protein-coding common_peak2_109_463_0.849922334444699_9.28294216234992_23.8891538996419 chr1 165809899 165813352 + 23.8891538996419 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 22944 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_83_1018_-0.762239069994603_9.61181880116851_23.8887405223368 chrX 36982897 36984367 + 23.8887405223368 NA intron (NM_001177323, intron 1 of 9) intron (NM_001177323, intron 1 of 9) 6063 NM_001177324 56526 Mm.260036 NM_019942 ENSMUSG00000050379 Sept6 2810035H17Rik|C920001C06Rik|Sep6|mKIAA0128 septin 6 protein-coding common_peak1_59_748_-0.91355316467469_9.0920453261214_23.8876911089799 chr1 171122108 171123085 + 23.8876911089799 NA intron (NM_001081275, intron 1 of 5) intron (NM_001081275, intron 1 of 5) 935 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak2_64_183_1.25335256427588_8.15023823819496_23.8745418279311 chr8 84183269 84184239 + 23.8745418279311 NA Intergenic CpG -4793 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak2_66_825_-0.859454271269723_9.26027083578458_23.8603563289622 chr6 12124360 12126673 + 23.8603563289622 NA Intergenic Intergenic -15936 NR_003631 625347 Mm.389084 NM_001039041 ENSMUSG00000057223 Gm6578 EG625347 mitochondrial ribosomal protein L32 pseudogene pseudo common_peak1_405_3255_0.349926750698147_11.8438483596153_23.8481406880708 chr3 94951860 94954881 + 23.8481406880708 NA Intergenic Intergenic -1645 NM_017395 53970 Mm.24308 NM_017395 ENSMUSG00000005774 Rfx5 - regulatory factor X, 5 (influences HLA class II expression) protein-coding common_peak1_25_376_-1.40299946862773_7.8569209789548_23.8474220722251 chr11 54860775 54861395 + 23.8474220722251 NA promoter-TSS (NM_029327) promoter-TSS (NM_029327) -494 NM_029327 75530 Mm.83578 NM_029327 ENSMUSG00000020268 Lyrm7 1700024C24Rik|9330147L21Rik LYR motif containing 7 protein-coding unique_peak1_24_16_2.99855235088604_5.58673901669336_23.8445752298281 chr1 151495383 151496063 + 23.8445752298281 NA intron (NM_011277, intron 1 of 6) B1_Mus2|SINE|Alu 5100 NM_011277 19821 Mm.474038 NM_011277 ENSMUSG00000026484 Rnf2 AI326319|AI450156|AU019207|Ring1B|dinG ring finger protein 2 protein-coding common_peak1_175_2111_-0.504759443105435_10.7920143978057_23.8373404392396 chr11 117325841 117328444 + 23.8373404392396 NA intron (NM_001113487, intron 2 of 10) (TG)n|Simple_repeat|Simple_repeat -4573 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak2_32_451_-1.24285901475431_8.19874945503803_23.8357927230125 chr11 115814132 115815744 + 23.8357927230125 NA exon (NM_029557, exon 2 of 11) exon (NM_029557, exon 2 of 11) 199 NM_029557 76265 Mm.275438 NM_029557 ENSMUSG00000020781 Tsen54 0610034P02Rik tRNA splicing endonuclease subunit 54 protein-coding unique_peak1_16_1_5.40353626097417_3.70176813048709_23.8233515015344 chr12 111902682 111903011 + 23.8233515015344 NA intron (NM_011625, intron 1 of 16) intron (NM_011625, intron 1 of 16) 5209 NM_011625 21981 Mm.313076 NM_011625 ENSMUSG00000021285 Ppp1r13b AI449786|ASPP1|AW545810|Tp53bp2|Trp53bp2|p85 protein phosphatase 1, regulatory (inhibitor) subunit 13B protein-coding common_peak2_110_471_0.841275118002855_9.30328060836327_23.811243049182 chr4 135312813 135315125 + 23.811243049182 NA Intergenic Intergenic 39245 NM_016799 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak2_64_803_-0.874137170846032_9.21398310575591_23.8097698214236 chr19 57993596 57996041 + 23.8097698214236 NA intron (NM_181415, intron 27 of 28) intron (NM_181415, intron 27 of 28) -56349 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA common_peak2_62_780_-0.887569578190197_9.16539394904688_23.809559052772 chr7 127405946 127407291 + 23.809559052772 NA 5' UTR (NM_146203, exon 1 of 3) 5' UTR (NM_146203, exon 1 of 3) 204 NM_146203 233893 Mm.297097 NM_146203 ENSMUSG00000045757 Zfp764 8030466O12Rik zinc finger protein 764 protein-coding common_peak1_69_858_-0.838456295428573_9.32728617342418_23.8087713367877 chr10 6983172 6984275 + 23.8087713367877 NA intron (NM_001302795, intron 4 of 5) intron (NM_001302795, intron 4 of 5) -3258 NM_001170801 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak2_400_3200_0.352576023195962_11.8205949731436_23.80440982291 chr19 53389110 53391731 + 23.80440982291 NA 5' UTR (NM_172429, exon 1 of 6) 5' UTR (NM_172429, exon 1 of 6) 153 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak2_124_571_0.774249442236314_9.54699605789655_23.7974649608147 chr1 138558991 138560991 + 23.7974649608147 NA intron (NM_001311148, intron 2 of 7) intron (NM_001311148, intron 2 of 7) 59766 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak2_124_571_0.774249442236314_9.54699605789655_23.7974649608147-2 chr4 123235144 123238346 + 23.7974649608147 NA intron (NM_013905, intron 1 of 4) intron (NM_013905, intron 1 of 4) 3189 NM_013905 56198 Mm.103615 NM_013905 ENSMUSG00000032744 Heyl Hey3|Hrt3|bHLHb33|hesr3 hairy/enhancer-of-split related with YRPW motif-like protein-coding common_peak1_61_769_-0.895420119661601_9.14100457575146_23.7940585026646 chr9 57075377 57076081 + 23.7940585026646 NA promoter-TSS (NM_011378) promoter-TSS (NM_011378) -647 NM_001110350 20466 Mm.15755 NM_011378 ENSMUSG00000042557 Sin3a AW553200|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) protein-coding common_peak1_264_1783_0.46294745240113_11.0323736261209_23.7935811985704 chr16 24392439 24394515 + 23.7935811985704 NA non-coding (NR_037954, exon 1 of 2) non-coding (NR_037954, exon 1 of 2) 127 NM_178665 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_40_69_1.83216024812046_7.0453631410052_23.7909691494693 chr4 3937903 3938487 + 23.7909691494693 NA promoter-TSS (NM_001285804) promoter-TSS (NM_001285804) 210 NM_019969 56711 Mm.331467 NM_019969 ENSMUSG00000003282 Plag1 - pleiomorphic adenoma gene 1 protein-coding common_peak2_58_152_1.34813856234917_7.93145712386724_23.7870964496762 chr9 36796667 36797545 + 23.7870964496762 NA promoter-TSS (NM_007915) promoter-TSS (NM_007915) -38 NM_007915 13663 Mm.4337 NM_007915 ENSMUSG00000062762 Ei24 AA536736|AI115355|PIG8 etoposide induced 2.4 mRNA protein-coding common_peak2_159_1914_-0.532157515622474_10.6370499190011_23.7762866152513 chr10 91180181 91183294 + 23.7762866152513 NA Intergenic CpG -10118 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak2_664_6373_0.254022595762828_12.7649946016593_23.7644142106107 chr14 56258875 56264761 + 23.7644142106107 NA intron (NM_013542, intron 1 of 4) intron (NM_013542, intron 1 of 4) 442 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak1_38_515_-1.13828380581539_8.44208535251556_23.7628488812723 chrX 7841239 7841712 + 23.7628488812723 NA promoter-TSS (NM_138604) promoter-TSS (NM_138604) -356 NM_001290536 54644 Mm.142827 NM_138604 ENSMUSG00000031154 Otud5 AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7 OTU domain containing 5 protein-coding common_peak1_106_1281_-0.665210127262968_9.99157548298726_23.7601045276658 chr10 60002215 60003192 + 23.7601045276658 NA promoter-TSS (NM_001199187) promoter-TSS (NM_001199187) -102 NM_026937 69090 Mm.155839 NM_026937 ENSMUSG00000044475 Ascc1 1810015P09Rik|AI550520|ASC1p50|CGI-18 activating signal cointegrator 1 complex subunit 1 protein-coding common_peak2_393_3124_0.356078453374842_11.7876797011242_23.7507866824006 chr19 18629076 18632480 + 23.7507866824006 NA intron (NM_017375, intron 1 of 9) intron (NM_017375, intron 1 of 9) 1035 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_29_418_-1.30215000110165_8.05973143314853_23.7408021295869 chr8 70539673 70540251 + 23.7408021295869 NA intron (NM_007924, intron 1 of 11) intron (NM_007924, intron 1 of 11) 287 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding common_peak1_122_1469_-0.616022658505017_10.2135891104712_23.7371208853442 chr17 26715016 26716268 + 23.7371208853442 NA promoter-TSS (NM_029870) promoter-TSS (NM_029870) -8 NM_029870 77128 Mm.275414 NM_029870 ENSMUSG00000048249 Crebrf A930001N09Rik|LRF CREB3 regulatory factor protein-coding common_peak2_52_668_-0.970120635198349_8.90080208304229_23.7340290576847 chr3 90291676 90293049 + 23.7340290576847 NA Intergenic Intergenic 22213 NR_105979 102465612 NR_105979 ENSMUSG00000099199 Mir7012 Gm27370|mmu-mir-7012 microRNA 7012 ncRNA common_peak1_71_222_1.15701008432507_8.37940494208284_23.7330102212817 chr2 11173817 11175093 + 23.7330102212817 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 2073 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak2_142_708_0.702548529342911_9.82091608191097_23.7257738307094 chr3 86140684 86142635 + 23.7257738307094 NA promoter-TSS (NR_004418) promoter-TSS (NR_004418) -972 NR_004418 19871 NR_004418 ENSMUSG00000064390 Rnu73b U73b U73B small nuclear RNA snRNA common_peak2_185_2234_-0.488630083996734_10.8817440740723_23.7250183733695 chr8 57425320 57429438 + 23.7250183733695 NA Intergenic C-rich|Low_complexity|Low_complexity -28544 NM_009136 20284 Mm.12886 NM_009136 ENSMUSG00000031610 Scrg1 AW124307 scrapie responsive gene 1 protein-coding common_peak1_97_383_0.918526047375885_9.0442255244091_23.7193275658509 chr4 151043804 151044759 + 23.7193275658509 NA 5' UTR (NM_001289878, exon 1 of 22) 5' UTR (NM_001289878, exon 1 of 22) 384 NM_011067 18628 Mm.121361 NM_011067 ENSMUSG00000028957 Per3 2810049O06Rik|mPer3 period circadian clock 3 protein-coding common_peak2_300_2141_0.424520514769164_11.2770030221348_23.7082293138671 chr16 42874449 42877053 + 23.7082293138671 NA promoter-TSS (NR_040522) promoter-TSS (NR_040522) 11 NR_040522 75722 Mm.243747 NR_040521 ENSMUSG00000075070 4932412D23Rik ENSMUSG00000075070|Gm10809 RIKEN cDNA 4932412D23 gene ncRNA common_peak1_19_309_-1.58499017764346_7.48362931645251_23.7071394904793 chr11 118264934 118265375 + 23.7071394904793 NA exon (NM_001033528, exon 16 of 21) exon (NM_001033528, exon 16 of 21) -16562 NM_011180 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak2_88_1073_-0.735759909221224_9.7008983233748_23.7002921428032 chr10 86021305 86023056 + 23.7002921428032 NA promoter-TSS (NM_001310745) promoter-TSS (NM_001310745) 26 NM_001310745 69754 Mm.44236 NM_153195 ENSMUSG00000001786 Fbxo7 2410015K21Rik|A230052G17Rik|AI117679|AW260462|C85118 F-box protein 7 protein-coding common_peak1_278_1921_0.446558616267124_11.1316719289073_23.6965766138831 chr2 172999692 173001173 + 23.6965766138831 NA intron (NM_175112, intron 1 of 11) CpG 315 NM_175112 66679 Mm.4113 NM_175112 ENSMUSG00000027509 Rae1 3230401I12Rik|D2Ertd342e|MNRP|MNRP41 ribonucleic acid export 1 protein-coding common_peak1_98_1188_-0.694078535931492_9.86849373177991_23.6926737802538 chrX 74254789 74255926 + 23.6926737802538 NA intron (NM_007927, intron 2 of 5) intron (NM_007927, intron 2 of 5) 670 NM_007927 13726 Mm.18892 NM_007927 ENSMUSG00000001964 Emd AW550900|Sta emerin protein-coding common_peak1_200_2421_-0.467304933391324_11.0083306829987_23.6912241477079 chr17 28014194 28016481 + 23.6912241477079 NA intron (NM_001286040, intron 12 of 24) intron (NM_001286040, intron 12 of 24) 65247 NM_013687 21463 Mm.29758 NM_013687 ENSMUSG00000062859 Tcp11 D17Ken1|Tcp-11 t-complex protein 11 protein-coding common_peak1_32_450_-1.2396636755945_8.19715178545813_23.6882646379349 chr14 54041364 54042114 + 23.6882646379349 NA Intergenic Intergenic 212190 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_513_4503_0.299222848262803_12.2866025362116_23.6793072778818 chr3 88619164 88626808 + 23.6793072778818 NA intron (NM_001198912, intron 1 of 21) intron (NM_001198912, intron 1 of 21) 1592 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak2_46_95_1.61816858670486_7.39404679407359_23.6687687802806 chr4 123233330 123234300 + 23.6687687802806 NA 5' UTR (NM_013905, exon 1 of 5) 5' UTR (NM_013905, exon 1 of 5) 259 NM_013905 56198 Mm.103615 NM_013905 ENSMUSG00000032744 Heyl Hey3|Hrt3|bHLHb33|hesr3 hairy/enhancer-of-split related with YRPW motif-like protein-coding common_peak2_39_526_-1.12391261282008_8.47970284522717_23.6564696735312 chr19 11107352 11108797 + 23.6564696735312 NA intron (NM_027058, intron 4 of 6) intron (NM_027058, intron 4 of 6) 22804 NM_027058 69369 Mm.391200 NM_027058 ENSMUSG00000024729 1700017D01Rik - RIKEN cDNA 1700017D01 gene protein-coding common_peak1_122_1468_-0.61504089933757_10.2130982308875_23.6543761827225 chr10 119081682 119083055 + 23.6543761827225 NA Intergenic Intergenic -10537 NR_045348 73400 Mm.416864 NR_045348 ENSMUSG00000100681 1700064J06Rik - RIKEN cDNA 1700064J06 gene ncRNA common_peak1_43_82_1.71137062253338_7.23072474261362_23.6539714963512 chr11 121451858 121452506 + 23.6539714963512 NA exon (NM_029878, exon 1 of 39) exon (NM_029878, exon 1 of 39) 233 NM_029878 108903 Mm.23686 NM_029878 ENSMUSG00000039230 Tbcd 2310057L06Rik|A030005L14Rik|mKIAA0988 tubulin-specific chaperone d protein-coding common_peak2_69_211_1.18013757114669_8.31798924013654_23.6528182719988 chr7 55841844 55842950 + 23.6528182719988 NA intron (NM_001164662, intron 1 of 30) CpG 326 NM_001164661 20430 Mm.37249 NM_011370 ENSMUSG00000030447 Cyfip1 E030028J09Rik|P140SRA-1|P140sra1|Shyc|Sra-1|Sra1|l(7)1Rl|l71Rl|l7Rl1|mKIAA0068|pl-1 cytoplasmic FMR1 interacting protein 1 protein-coding common_peak1_58_735_-0.918035551015187_9.06454418054942_23.6495783315566-2 chrX 74084681 74085747 + 23.6495783315566 NA intron (NM_010788, intron 1 of 3) CpG 476 NM_010788 17257 Mm.131408 NM_010788 ENSMUSG00000031393 Mecp2 1500041B07Rik|D630021H01Rik|Mbd5|WBP10 methyl CpG binding protein 2 protein-coding common_peak1_58_735_-0.918035551015187_9.06454418054942_23.6495783315566 chr4 101298656 101299603 + 23.6495783315566 NA Intergenic ID_B1|SINE|B4 -33847 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_72_891_-0.818580873534676_9.39160946315297_23.641750414527 chr16 27387400 27388515 + 23.641750414527 NA promoter-TSS (NM_026202) promoter-TSS (NM_026202) -999 NM_001025615 67501 Mm.258985 NM_026202 ENSMUSG00000038127 Ccdc50 C3orf6 coiled-coil domain containing 50 protein-coding common_peak2_271_3332_-0.392620096390653_11.5062955539149_23.6311439522038 chr7 100492245 100497264 + 23.6311439522038 NA intron (NM_011671, intron 2 of 7) intron (NM_011671, intron 2 of 7) 1396 NM_011671 22228 Mm.171378 NM_011671 ENSMUSG00000033685 Ucp2 Slc25a8 uncoupling protein 2 (mitochondrial, proton carrier) protein-coding common_peak2_73_234_1.12987901583277_8.44145645448138_23.6246253472499 chr13 34993465 34994738 + 23.6246253472499 NA promoter-TSS (NM_001110331) promoter-TSS (NM_001110331) 43 NM_011868 23986 Mm.491141 NM_011868 ENSMUSG00000021417 Eci2 Acbd2|Drs1|Hca88|Peci enoyl-Coenzyme A delta isomerase 2 protein-coding common_peak1_84_1027_-0.753982701341387_9.62863319852319_23.6234896312259 chr1 45794797 45796055 + 23.6234896312259 NA promoter-TSS (NM_028599) promoter-TSS (NM_028599) -75 NM_028599 73674 Mm.270376 NM_028599 ENSMUSG00000025995 Wdr75 1300003A18Rik|2410118I19Rik|C77608 WD repeat domain 75 protein-coding common_peak1_56_142_1.38462738277178_7.85218502816428_23.6230939734354 chr8 128651821 128652883 + 23.6230939734354 NA Intergenic Intergenic -33302 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_504_4397_0.302321891628807_12.2537928346694_23.6211315314348 chr17 52146169 52153938 + 23.6211315314348 NA Intergenic MIR|SINE|MIR 267326 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA unique_peak2_30_428_-1.27815163276524_8.10575802111693_23.6113769913063 chr7 58450674 58453075 + 23.6113769913063 NA Intergenic L1MA4|LINE|L1 -206328 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_477_4080_0.313009830020832_12.1512119102685_23.6062988398115 chr1 36307010 36311239 + 23.6062988398115 NA intron (NM_001290727, intron 1 of 5) intron (NM_001290727, intron 1 of 5) 1391 NM_001172205 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding common_peak1_33_460_-1.21847436826881_8.23938575629493_23.594439389888 chrX 101639213 101639811 + 23.594439389888 NA promoter-TSS (NM_139144) promoter-TSS (NM_139144) -539 NM_139144 108155 Mm.487332 NM_139144 ENSMUSG00000034160 Ogt 1110038P24Rik|4831420N21Rik|AI115525|Ogtl O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) protein-coding common_peak2_87_319_0.991094270179302_8.81747522997701_23.5894094399201 chr5 65107249 65108520 + 23.5894094399201 NA Intergenic CpG -23347 NM_175174 71778 Mm.10281 NM_175174 ENSMUSG00000054920 Klhl5 1300013C10Rik kelch-like 5 protein-coding common_peak2_244_1594_0.485641115136774_10.8821612662206_23.5783844808727 chr11 82780544 82782167 + 23.5783844808727 NA promoter-TSS (NR_126068) promoter-TSS (NR_126068) 246 NM_010716 16882 Mm.277136 NM_010716 ENSMUSG00000020697 Lig3 D11Wsu78e ligase III, DNA, ATP-dependent protein-coding common_peak2_524_4637_0.294398712909134_12.3264864611006_23.5724109650747 chr16 94568407 94572726 + 23.5724109650747 NA promoter-TSS (NM_001113389) promoter-TSS (NM_001113389) -341 NM_001113389 13548 Mm.310973 NM_007890 ENSMUSG00000022897 Dyrk1a 2310043O08Rik|D16Ertd272e|D16Ertd493e|Dyrk|ENSMUSG00000074897|Gm10783|Mnbh|Mp86|mmb dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a protein-coding common_peak1_147_1765_-0.553261354064341_10.5096389506163_23.5491743492274 chr18 36743861 36745402 + 23.5491743492274 NA promoter-TSS (NM_011879) promoter-TSS (NM_011879) -25 NM_011879 24010 Mm.30234 NM_011879 ENSMUSG00000024474 Ik MuRED IK cytokine protein-coding common_peak2_509_4458_0.299884190878229_12.272446579753_23.547649414146 chr15 76296926 76301869 + 23.547649414146 NA intron (NM_153122, intron 19 of 26) RMER6A|LTR|ERVK 4963 NM_001195537 100503915 Mm.393455 NM_001195537 ENSMUSG00000071724 Smpd5 ENSMUSG00000071724|Gm10345|MA-nSMase sphingomyelin phosphodiesterase 5 protein-coding common_peak2_58_153_1.33873986434692_7.93615647286836_23.5369958298892 chr16 17094995 17096479 + 23.5369958298892 NA intron (NM_144954, intron 9 of 20) intron (NM_144954, intron 9 of 20) 15515 NM_001252445 66053 Mm.253614 NM_144954 ENSMUSG00000022771 Ppil2 0610009L05Rik|1700016N17Rik|4921520K19Rik|4930511F14Rik|AA589416|C130078A06Rik|CYC4 peptidylprolyl isomerase (cyclophilin)-like 2 protein-coding common_peak2_124_573_0.769213852339016_9.54951385284519_23.5336532311861 chr10 14704701 14706080 + 23.5336532311861 NA promoter-TSS (NM_025418) promoter-TSS (NM_025418) 99 NM_025418 66201 Mm.227983 NM_025418 ENSMUSG00000019868 Vta1 1110001D18Rik|1110059P08Rik|AU040813|C85340|LIP5|SBP1 vesicle (multivesicular body) trafficking 1 protein-coding common_peak1_128_1538_-0.597915829920977_10.2888196013677_23.5331610626512 chr11 107406966 107408833 + 23.5331610626512 NA intron (NM_145823, intron 1 of 9) L1M3|LINE|L1 62821 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_71_878_-0.821809370898025_9.36881466969439_23.5283742210259 chr12 55835685 55837290 + 23.5283742210259 NA 5' UTR (NM_001037756, exon 1 of 10) 5' UTR (NM_001037756, exon 1 of 10) 121 NM_001037756 52592 Mm.24761 NM_027867 ENSMUSG00000012076 Brms1l 0710008O11Rik|AI159718|BRMS1|D12Ertd407e breast cancer metastasis-suppressor 1-like protein-coding common_peak2_81_282_1.0433973334199_8.66635690954183_23.5280592585087 chr19 6298454 6300367 + 23.5280592585087 NA 3' UTR (NM_010119, exon 5 of 5) 3' UTR (NM_010119, exon 5 of 5) -7047 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak1_140_694_0.706396435968433_9.79406738559509_23.5260605574 chr6 99665541 99666999 + 23.5260605574 NA intron (NM_025829, intron 1 of 6) intron (NM_025829, intron 1 of 6) 501 NM_025829 66892 Mm.32889 NM_025829 ENSMUSG00000093661 Eif4e3 1300018P11Rik|AI451927|eIF4E-3 eukaryotic translation initiation factor 4E member 3 protein-coding common_peak1_67_834_-0.848871504014532_9.28119663535415_23.524242758124 chr12 69515757 69516941 + 23.524242758124 NA Intergenic ID_B1|SINE|B4 -40799 NR_038061 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak2_67_834_-0.848871504014532_9.28119663535415_23.524242758124 chr1 119711813 119714436 + 23.524242758124 NA intron (NM_019933, intron 13 of 26) intron (NM_019933, intron 13 of 26) -64124 NM_145506 226352 Mm.253156 NM_145506 ENSMUSG00000026383 Epb41l5 1700030C16Rik|AL022914|BE37|E230025E14Rik|Epb4.1l5|Lulu1|NBL5 erythrocyte membrane protein band 4.1 like 5 protein-coding common_peak2_215_1327_0.527005069051738_10.6385419658728_23.5150816140794 chr2 14073306 14074817 + 23.5150816140794 NA promoter-TSS (NM_011484) promoter-TSS (NM_011484) -51 NM_011484 20844 Mm.273174 NM_011484 ENSMUSG00000026718 Stam STAM1 signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 protein-coding common_peak1_65_811_-0.86140365833794_9.23463408801621_23.501893630739 chr4 130900552 130901380 + 23.501893630739 NA Intergenic Intergenic -12368 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding common_peak2_90_1094_-0.724370111768488_9.73453009860429_23.4951670275794 chr4 19568701 19570440 + 23.4951670275794 NA intron (NM_027769, intron 1 of 15) CpG 534 NM_027769 70568 Mm.38390 NM_027769 ENSMUSG00000028228 Cpne3 5430428M23Rik|5730450C07Rik|C85108|CPN3 copine III protein-coding common_peak2_503_4388_0.301769538651206_12.2505613241852_23.491466174006 chr8 86834064 86840338 + 23.491466174006 NA Intergenic B1_Mm|SINE|Alu 48057 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_514_4519_0.29754641335251_12.2908802639788_23.4771090338927 chr17 86960604 86965413 + 23.4771090338927 NA promoter-TSS (NM_145491) promoter-TSS (NM_145491) -103 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding unique_peak2_30_427_-1.27478478166684_8.10407459556773_23.4608072312701 chr9 21097015 21099277 + 23.4608072312701 NA Intergenic RLTR18B|LTR|ERVK -6138 NR_038081 100568458 Mm.196137 NR_038081 Gm38431 Raver1-fdx1l predicted gene, 38431 ncRNA common_peak1_97_1174_-0.694956493355322_9.8509667947747_23.4565123493338 chr10 117918710 117920081 + 23.4565123493338 NA Intergenic MTD|LTR|ERVL-MaLR -6064 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_164_886_0.632635240238137_10.1091079144201_23.4487662996312 chr10 111506418 111507550 + 23.4487662996312 NA exon (NM_009344, exon 1 of 2) exon (NM_009344, exon 1 of 2) 698 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_401_3218_0.348893666011683_11.8268436944835_23.4406058809492 chr5 29734780 29737741 + 23.4406058809492 NA promoter-TSS (NR_028426) promoter-TSS (NR_028426) -324 NR_028426 332993 Mm.473746 NR_028426 Gm5129 EG332993|ENSMUSG00000053121 predicted gene 5129 ncRNA common_peak2_334_2495_0.393247068165797_11.4820257529451_23.4331612635815 chr7 111081142 111084186 + 23.4331612635815 NA intron (NM_001040131, intron 1 of 20) CpG 366 NM_001040131 13690 Mm.185453 NM_013507 ENSMUSG00000005610 Eif4g2 DAP-5|E130105L11Rik|Nat1|Natm1|p97 eukaryotic translation initiation factor 4, gamma 2 protein-coding common_peak2_338_2537_0.390177660484579_11.5045651840834_23.4273667921698 chr10 21991144 21995753 + 23.4273667921698 NA promoter-TSS (NM_001161850) promoter-TSS (NM_001161850) -442 NM_001161850 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak2_99_398_0.89899487828675_9.08974237536572_23.4263211103668 chr1 57377246 57378524 + 23.4263211103668 NA promoter-TSS (NR_037999) promoter-TSS (NR_037999) 265 NM_028546 73467 Mm.263673 NM_028546 ENSMUSG00000038323 1700066M21Rik AI428479 RIKEN cDNA 1700066M21 gene protein-coding common_peak2_673_6498_0.249793093685085_12.7908985794874_23.4229620169543 chr11 83624479 83633236 + 23.4229620169543 NA Intergenic Intergenic 20521 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak1_98_1185_-0.690433830731839_9.86667137918008_23.4177019467308 chr9 108338398 108340083 + 23.4177019467308 NA 5' UTR (NM_008160, exon 1 of 2) 5' UTR (NM_008160, exon 1 of 2) 160 NM_008160 14775 Mm.1090 NM_008160 ENSMUSG00000063856 Gpx1 AI195024|AL033363|CGPx|GPx-1|GSHPx-1|Gpx glutathione peroxidase 1 protein-coding common_peak1_121_1454_-0.615671675562318_10.1989676000145_23.4167618337415 chr10 60277578 60278641 + 23.4167618337415 NA intron (NM_001146120, intron 1 of 13) intron (NM_001146120, intron 1 of 13) 481 NM_001146121 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding common_peak1_236_1521_0.494480963763056_10.8189931253851_23.4092962359725 chr6 124722860 124724971 + 23.4092962359725 NA intron (NM_013545, intron 11 of 15) intron (NM_013545, intron 11 of 15) -5525 NR_029792 723944 NR_029792 ENSMUSG00000065462 Mir200c Mirn200c|mir-200c microRNA 200c ncRNA common_peak1_140_695_0.704322107730574_9.79510454971402_23.4066678063589 chr11 107428227 107429922 + 23.4066678063589 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 41646 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_37_502_-1.14743807522228_8.40069555219439_23.3946642805411 chr10 40258466 40259054 + 23.3946642805411 NA Intergenic B1_Mus1|SINE|Alu -1095 NM_026113 67371 Mm.64104 NM_026113 ENSMUSG00000019837 Gtf3c6 2410016F19Rik|AU019813 general transcription factor IIIC, polypeptide 6, alpha protein-coding common_peak2_32_448_-1.23325168708027_8.19394579120101_23.3940722772148 chr11 75597635 75599448 + 23.3940722772148 NA intron (NM_008850, intron 3 of 11) intron (NM_008850, intron 3 of 11) 1690 NR_110477 654359 Mm.439961 NR_110477 Gm12338 OTTMUSG00000006216 cytochrome c oxidase, subunit VIIc pseudogene pseudo common_peak2_70_866_-0.826728637374817_9.34652386453443_23.3814557087054 chr3 154207343 154211454 + 23.3814557087054 NA intron (NM_001081263, intron 3 of 21) intron (NM_001081263, intron 3 of 21) 121162 NM_010713 16875 Mm.15530 NM_010713 ENSMUSG00000096225 Lhx8 L3|Lhx7 LIM homeobox protein 8 protein-coding common_peak1_20_319_-1.54445345108886_7.54970136934293_23.3811430509108 chr2 31142730 31143188 + 23.3811430509108 NA promoter-TSS (NM_019406) promoter-TSS (NM_019406) -951 NM_001038700 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak2_256_1711_0.46813466275553_10.9755343177789_23.3804456299282 chr1 106598414 106603157 + 23.3804456299282 NA intron (NM_009741, intron 1 of 1) (CA)n|Simple_repeat|Simple_repeat -54154 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_69_854_-0.831722584063371_9.32391931774158_23.3779830596799 chr3 89436172 89437568 + 23.3779830596799 NA intron (NM_146131, intron 1 of 10) intron (NM_146131, intron 1 of 10) 166 NM_146131 229534 Mm.65906 NM_146131 ENSMUSG00000042613 Pbxip1 4732463H20Rik pre B cell leukemia transcription factor interacting protein 1 protein-coding common_peak1_246_1616_0.480265154998062_10.8992365409727_23.3777343136559 chr3 51339632 51341412 + 23.3777343136559 NA 5' UTR (NM_023502, exon 1 of 10) 5' UTR (NM_023502, exon 1 of 10) 122 NM_001291059 69257 Mm.131038 NM_023502 ENSMUSG00000037174 Elf2 2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2 E74-like factor 2 protein-coding common_peak1_55_138_1.39423598848077_7.81605906696389_23.3706307814989 chr10 12807051 12808024 + 23.3706307814989 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 54198 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_52_665_-0.963636601628149_8.89756006625719_23.3692743924072 chr17 25875113 25876151 + 23.3692743924072 NA exon (NM_026686, exon 1 of 6) exon (NM_026686, exon 1 of 6) 132 NM_026686 68347 Mm.35098 NM_026686 ENSMUSG00000025731 Mettl26 0610011F06Rik methyltransferase like 26 protein-coding common_peak1_64_799_-0.866941669441829_9.21038535505381_23.3648075669281 chr18 12236467 12237213 + 23.3648075669281 NA promoter-TSS (NM_008720) promoter-TSS (NM_008720) -454 NM_008720 18145 Mm.3484 NM_008720 ENSMUSG00000024413 Npc1 A430089E03Rik|C85354|D18Ertd139e|D18Ertd723e|lcsd|nmf164|spm Niemann-Pick type C1 protein-coding common_peak2_412_3342_0.342134874689892_11.8779950769623_23.3534756547175 chr12 101081788 101084616 + 23.3534756547175 NA non-coding (NR_038050, exon 1 of 2) non-coding (NR_038050, exon 1 of 2) 500 NM_211355 68734 Mm.87077 NM_211355 ENSMUSG00000041846 Smek1 1110034C04Rik|BC064465|Ppp4r3a|mKIAA2010 SMEK homolog 1, suppressor of mek1 (Dictyostelium) protein-coding unique_peak2_13_243_-1.87078489873132_6.99534488819723_23.3475398282188 chr4 19894777 19895987 + 23.3475398282188 NA intron (NM_175406, intron 2 of 7) intron (NM_175406, intron 2 of 7) 27184 NM_175406 242341 Mm.19298 NM_175406 ENSMUSG00000028238 Atp6v0d2 1620401A02Rik|AI324824|V-ATPase ATPase, H+ transporting, lysosomal V0 subunit D2 protein-coding common_peak1_165_895_0.6287632582971_10.1217365512062_23.3475217158956 chr10 42761515 42763068 + 23.3475217158956 NA intron (NM_153055, intron 1 of 20) CpG 795 NM_153055 140740 Mm.214344 NM_153055 ENSMUSG00000019802 Sec63 5730478J10Rik|AI649014|AW319215 SEC63-like (S. cerevisiae) protein-coding common_peak1_318_3950_-0.355957403337248_11.770023429309_23.3410158390586 chr10 118468171 118471656 + 23.3410158390586 NA Intergenic Intergenic 28867 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak1_84_302_1.00846786437954_8.74740791566272_23.338389615327 chr7 27804365 27805479 + 23.338389615327 NA Intergenic Intergenic -2274 NM_027703 71163 Mm.440493 NM_027703 ENSMUSG00000030604 Zfp626 4833408D11Rik|4933426I21Rik|7630402I04Rik zinc finger protein 626 protein-coding common_peak1_14_254_-1.81230931544751_7.0881987791351_23.3310562681297 chr15 64022548 64022932 + 23.3310562681297 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 37708 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_75_921_-0.795034114659735_9.45110588309947_23.3293668446858 chr17 36110939 36111937 + 23.3293668446858 NA intron (NM_001271005, intron 1 of 6) CpG 238 NM_001271005 667803 Mm.477808 NM_001271005 H2-T-ps C920025E04Rik|H2-T11 histocompatibility 2, T region locus, pseudogene protein-coding common_peak1_122_1464_-0.6111071680909_10.2111313652642_23.3245676325337 chr6 54866952 54868458 + 23.3245676325337 NA intron (NM_199143, intron 2 of 4) intron (NM_199143, intron 2 of 4) 50789 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak2_43_567_-1.06333706562437_8.61807858669249_23.3132475120449 chr5 140647836 140649283 + 23.3132475120449 NA intron (NM_001308040, intron 1 of 12) intron (NM_001308040, intron 1 of 12) 472 NM_001308040 78339 Mm.28947 NM_175274 ENSMUSG00000036565 Ttyh3 2900029G13Rik|AI414930|TTY3|mTTY3 tweety family member 3 protein-coding common_peak2_101_1218_-0.6771993223064_9.91288274946701_23.3114299988625 chrX 74254636 74256184 + 23.3114299988625 NA intron (NM_007927, intron 2 of 5) intron (NM_007927, intron 2 of 5) 723 NM_007927 13726 Mm.18892 NM_007927 ENSMUSG00000001964 Emd AW550900|Sta emerin protein-coding common_peak1_334_2497_0.392091525420089_11.482603524318_23.3067568389461 chr12 31948904 31950362 + 23.3067568389461 NA intron (NM_177993, intron 1 of 8) CpG 902 NM_177993 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding common_peak1_44_87_1.66674701892733_7.29280512810096_23.3056788454804 chr16 29945531 29946379 + 23.3056788454804 NA Intergenic CpG 33169 NR_037689 328657 Mm.425982 NM_001033403 Gm1968 - predicted gene 1968 ncRNA common_peak1_132_635_0.731017357378006_9.67839163397336_23.3023253929495 chr14 54617188 54618603 + 23.3023253929495 NA promoter-TSS (NM_011186) promoter-TSS (NM_011186) 100 NM_011186 19173 Mm.8911 NM_011186 ENSMUSG00000022193 Psmb5 - proteasome (prosome, macropain) subunit, beta type 5 protein-coding common_peak2_132_635_0.731017357378006_9.67839163397336_23.3023253929495 chr5 125055655 125059118 + 23.3023253929495 NA intron (NM_001253904, intron 17 of 47) intron (NM_001253904, intron 17 of 47) 53911 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_17_286_-1.66022156480302_7.33479614427418_23.3021015095267 chr11 115199048 115199400 + 23.3021015095267 NA intron (NM_001033393, intron 3 of 9) intron (NM_001033393, intron 3 of 9) 11737 NM_001033393 320534 Mm.260587 NM_001033393 ENSMUSG00000045980 Tmem104 C630005D06Rik|mFLJ00021 transmembrane protein 104 protein-coding unique_peak2_1_104_-4.09782918810002_4.66533092361611_23.3015089406721 chr6 83038290 83038948 + 23.3015089406721 NA intron (NM_013586, intron 4 of 13) intron (NM_013586, intron 4 of 13) 4395 NM_013586 16950 Mm.380433 NM_013586 ENSMUSG00000000693 Loxl3 Lor2|Loxl2 lysyl oxidase-like 3 protein-coding common_peak1_134_1606_-0.579841059957179_10.3602336836965_23.2901279071089 chr17 35049485 35051046 + 23.2901279071089 NA promoter-TSS (NM_033444) promoter-TSS (NM_033444) 22 NM_033444 114584 Mm.29524 NM_033444 ENSMUSG00000007041 Clic1 Clcp|G6 chloride intracellular channel 1 protein-coding common_peak2_74_910_-0.801157535512385_9.43072847604586_23.2802732325334 chr13 30624264 30627484 + 23.2802732325334 NA Intergenic ORR1D2|LTR|ERVL-MaLR 10831 NR_045975 75090 Mm.292232 NR_045975 ENSMUSG00000086263 4930519D14Rik - RIKEN cDNA 4930519D14 gene ncRNA common_peak1_85_308_1.00087645353593_8.77190125467234_23.2775306000642 chr2 20961258 20962563 + 23.2775306000642 NA intron (NM_001081364, intron 1 of 23) intron (NM_001081364, intron 1 of 23) 5811 NM_001081364 71435 Mm.28507 NM_001081364 ENSMUSG00000036591 Arhgap21 5530401C11Rik|AA416458|ARHGAP10 Rho GTPase activating protein 21 protein-coding common_peak1_83_296_1.01638014537044_8.72250919348599_23.2760188427967 chr10 6987414 6988810 + 23.2760188427967 NA intron (NM_001304955, intron 5 of 6) intron (NM_001304955, intron 5 of 6) -7647 NM_001170801 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak2_267_1819_0.454045587436378_11.0567455288042_23.2719118106557 chr16 24392168 24394601 + 23.2719118106557 NA promoter-TSS (NM_178665) promoter-TSS (NM_178665) 34 NM_178665 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_753_7550_0.231828538891621_12.9983662713279_23.2677427404415 chr8 124312597 124322142 + 23.2677427404415 NA intron (NM_139272, intron 3 of 15) intron (NM_139272, intron 3 of 15) 85975 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_89_1080_-0.725359858983662_9.71547087824282_23.2614183018918 chr9 21091328 21092650 + 23.2614183018918 NA promoter-TSS (NM_027911) promoter-TSS (NM_027911) -1 NM_027911 71766 Mm.196137 NM_027911 ENSMUSG00000010205 Raver1 1300006N24Rik|AA050359|mKIAA1978 ribonucleoprotein, PTB-binding 1 protein-coding common_peak2_102_1230_-0.674067162707718_9.9285814651306_23.2558498117158 chr4 118178946 118180909 + 23.2558498117158 NA 5' UTR (NM_172382, exon 1 of 19) 5' UTR (NM_172382, exon 1 of 19) 116 NM_172382 230674 Mm.234234 NM_172382 ENSMUSG00000033326 Kdm4a D4Ertd222e|JHDM3A|Jmjd2|Jmjd2a|mKIAA0677 lysine (K)-specific demethylase 4A protein-coding common_peak1_53_675_-0.952059558256233_8.92484965715407_23.2347106261089 chr12 55836329 55837034 + 23.2347106261089 NA intron (NM_001037756, intron 1 of 9) CpG 315 NM_001037756 52592 Mm.24761 NM_027867 ENSMUSG00000012076 Brms1l 0710008O11Rik|AI159718|BRMS1|D12Ertd407e breast cancer metastasis-suppressor 1-like protein-coding common_peak1_84_1023_-0.748358152147508_9.62582092392624_23.2305458840737 chr7 127284952 127286264 + 23.2305458840737 NA Intergenic Intergenic -10652 NM_001253873 16408 Mm.1618 NM_008400 ENSMUSG00000030830 Itgal (p180)|Cd11a|LFA-1|LFA-1A|Ly-15|Ly-21 integrin alpha L protein-coding common_peak2_217_1348_0.520679913767724_10.6580145898321_23.2148481465376 chr6 90754531 90758348 + 23.2148481465376 NA intron (NM_001134384, intron 1 of 13) intron (NM_001134384, intron 1 of 13) -39910 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_38_511_-1.12705655039214_8.43647172480393_23.2115441706636 chr9 45277865 45278565 + 23.2115441706636 NA Intergenic Intergenic -9069 NM_008348 16154 Mm.379327 NM_008348 ENSMUSG00000032089 Il10ra AW553859|CDw210|CDw210a|IL-10R1|IL-10RA|Il10r|mIL-10R interleukin 10 receptor, alpha protein-coding common_peak1_85_1033_-0.741680988874629_9.64317997587762_23.1976446146804 chr11 116087165 116087966 + 23.1976446146804 NA promoter-TSS (NM_016852) promoter-TSS (NM_016852) -601 NM_016852 22378 Mm.284792 NM_016852 ENSMUSG00000034341 Wbp2 - WW domain binding protein 2 protein-coding common_peak1_58_731_-0.910173433242218_9.06061312166293_23.1865627125527 chr9 106368123 106369229 + 23.1865627125527 NA promoter-TSS (NM_153459) promoter-TSS (NM_153459) 44 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding common_peak1_19_306_-1.5709606177394_7.47661453650048_23.1804558952257-2 chr4 132515089 132515521 + 23.1804558952257 NA Intergenic Intergenic -4849 NM_144907 230784 Mm.23608 NM_144907 ENSMUSG00000028893 Sesn2 HI95|SEST2|Ses2 sestrin 2 protein-coding common_peak1_19_306_-1.5709606177394_7.47661453650048_23.1804558952257 chr13 41372589 41372983 + 23.1804558952257 NA intron (NM_001111324, intron 2 of 7) RLTR17B_Mm|LTR|ERVK -13785 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_137_1641_-0.572030780344654_10.3952230216055_23.1662334650087 chr10 5823160 5825062 + 23.1662334650087 NA promoter-TSS (NM_175374) promoter-TSS (NM_175374) -168 NM_175374 108853 Mm.55082 NM_175374 ENSMUSG00000019774 Mtrf1l 9130004K12Rik mitochondrial translational release factor 1-like protein-coding common_peak2_228_1450_0.502636090691428_10.7541498494125_23.1607502361096 chr1 85836351 85841445 + 23.1607502361096 NA intron (NM_133781, intron 4 of 8) intron (NM_133781, intron 4 of 8) 45451 NM_133781 12283 Mm.26135 NM_133781 ENSMUSG00000036707 Cab39 AA408805|AA960512|C78372|MO25|MO25alpha calcium binding protein 39 protein-coding common_peak2_84_303_1.00371433440891_8.74978468064804_23.1599119408303 chr7 27804362 27805525 + 23.1599119408303 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -2253 NM_027703 71163 Mm.440493 NM_027703 ENSMUSG00000030604 Zfp626 4833408D11Rik|4933426I21Rik|7630402I04Rik zinc finger protein 626 protein-coding common_peak1_35_478_-1.17258417267716_8.3175897593976_23.1555914925931 chr4 114652464 114653178 + 23.1555914925931 NA Intergenic RSINE1|SINE|B4 -168899 NR_033617 433746 Mm.388908 NR_033617 ENSMUSG00000055198 Gm12830 OTTMUSG00000008584 predicted gene 12830 ncRNA unique_peak2_13_242_-1.86486006477421_6.99238247121868_23.15245886178 chr1 34510058 34511423 + 23.15245886178 NA Intergenic Intergenic 12310 NM_009355 21755 Mm.10725 NM_009355 ENSMUSG00000026125 Prss39 Tesp1 protease, serine 39 protein-coding common_peak2_208_1268_0.534269262683637_10.5766109851829_23.1447439567956 chr5 108268175 108270425 + 23.1447439567956 NA 5' UTR (NM_026106, exon 1 of 3) 5' UTR (NM_026106, exon 1 of 3) 403 NM_026106 13486 Mm.303534 NM_026106 ENSMUSG00000029265 Dr1 1700121L09Rik|Dr1l|NC2|NC2beta down-regulator of transcription 1 protein-coding common_peak1_23_349_-1.43743564374023_7.73249328996221_23.1389799798109 chr9 99122475 99122969 + 23.1389799798109 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 17489 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak2_335_4175_-0.343982108025962_11.8559149425569_23.1377080939186 chr14 75843776 75847136 + 23.1377080939186 NA promoter-TSS (NR_045294) promoter-TSS (NR_045294) 200 NM_009429 22070 Mm.297482 NM_009429 ENSMUSG00000060126 Tpt1 TCTP|Trt|p21|p23 tumor protein, translationally-controlled 1 protein-coding common_peak1_663_6376_0.250680636867761_12.7640024842935_23.1364825544656 chr2 167346762 167353881 + 23.1364825544656 NA Intergenic Intergenic -1143 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak1_41_544_-1.08602546467943_8.54709968732457_23.1350252709908 chr9 56463217 56464120 + 23.1350252709908 NA intron (NM_025812, intron 1 of 9) intron (NM_025812, intron 1 of 9) 44822 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_62_774_-0.876443340209818_9.15983083005669_23.1337718199101 chr10 75300216 75301050 + 23.1337718199101 NA intron (NM_153406, intron 13 of 15) intron (NM_153406, intron 13 of 15) -16244 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_29_414_-1.28831109363658_8.052811979416_23.1319026081465 chr11 6000138 6000713 + 23.1319026081465 NA intron (NM_001174053, intron 4 of 19) intron (NM_001174053, intron 4 of 19) 44667 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding common_peak1_17_285_-1.65518597490572_7.33227834932553_23.1212304761654 chr19 53905765 53906271 + 23.1212304761654 NA intron (NM_001168491, intron 1 of 11) intron (NM_001168491, intron 1 of 11) 2667 NM_001168491 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak1_54_134_1.40447542133508_7.77905330771837_23.1203413672383 chr13 16011901 16012871 + 23.1203413672383 NA Intergenic Intergenic -2089 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding common_peak1_334_2500_0.390359944847075_11.4834693146045_23.1178904906143 chr6 39204863 39207529 + 23.1178904906143 NA intron (NM_001033430, intron 1 of 19) CpG 577 NM_001033430 338523 Mm.293175 NM_001033430 ENSMUSG00000042599 Kdm7a A630082K20Rik|BB041802|ENSMUSG00000073143|Jhdm1d|mKIAA1718 lysine (K)-specific demethylase 7A protein-coding unique_peak2_0_92_-5.14935479272829_3.96448141474389_23.1149809612517 chr5 120109766 120110479 + 23.1149809612517 NA Intergenic Intergenic -6391 NM_028762 74111 Mm.41022 NM_028762 ENSMUSG00000029594 Rbm19 1200009A02Rik|AV302714|NPO RNA binding motif protein 19 protein-coding common_peak1_85_1032_-0.740285057424755_9.64248201015268_23.1003400976865 chr6 129576622 129577951 + 23.1003400976865 NA promoter-TSS (NM_153590) promoter-TSS (NM_153590) -1000 NM_153590 243655 Mm.30968 NM_153590 ENSMUSG00000050241 Klre1 Klre-1|NKG2I killer cell lectin-like receptor family E member 1 protein-coding common_peak1_395_4997_-0.312456099899828_12.1309071361368_23.0848890178736 chr3 96219060 96222086 + 23.0848890178736 NA promoter-TSS (NM_178214) promoter-TSS (NM_178214) 307 NM_175662 319176 Mm.358954 NM_175662 ENSMUSG00000068855 Hist2h2ac H2a-613b histone cluster 2, H2ac protein-coding common_peak2_40_532_-1.09654845769375_8.5097174939123_23.0836249588659 chr4 132514766 132516296 + 23.0836249588659 NA Intergenic Intergenic -5075 NM_144907 230784 Mm.23608 NM_144907 ENSMUSG00000028893 Sesn2 HI95|SEST2|Ses2 sestrin 2 protein-coding unique_peak2_10_209_-2.08106008615853_6.67371547458686_23.0822339896022 chr11 108920214 108920983 + 23.0822339896022 NA intron (NM_015732, intron 1 of 10) CpG 249 NM_015732 12006 Mm.71710 NM_015732 ENSMUSG00000000142 Axin2 Axi1|Axil|Conductin axin 2 protein-coding common_peak1_100_1204_-0.677969237511867_9.89583281236139_23.074393030349 chr11 96828980 96830021 + 23.074393030349 NA promoter-TSS (NM_001130450) promoter-TSS (NM_001130450) 2 NM_001130450 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak1_38_510_-1.12423603132976_8.43506146527274_23.0743831674532 chr2 90744757 90745305 + 23.0743831674532 NA promoter-TSS (NM_018828) promoter-TSS (NM_018828) -339 NM_018828 55935 Mm.489638 NM_018828 ENSMUSG00000008200 Fnbp4 FBP30|Fnbp30|mKIAA1014 formin binding protein 4 protein-coding common_peak1_80_976_-0.765872668975506_9.54927841748063_23.071687600826 chr19 8984605 8985425 + 23.071687600826 NA Intergenic Intergenic -4269 NR_104460 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_25_371_-1.3837375664671_7.84729002787448_23.0461784280643 chr14 57571039 57571613 + 23.0461784280643 NA intron (NM_026526, intron 1 of 4) intron (NM_026526, intron 1 of 4) 243 NM_026526 68043 Mm.45225 NM_026526 ENSMUSG00000021951 Eef1akmt1 2510005D08Rik|AW045965|Ayu21-96|Gt(pU21)96Imeg|GtAyu21-96|N6amt2 eukaryotic translation elongation factor 1 alpha lysine methyltransferase 1 protein-coding common_peak2_357_2745_0.373040986462025_11.6096364033781_23.0306402096852 chr10 54072963 54077112 + 23.0306402096852 NA promoter-TSS (NR_038016) promoter-TSS (NR_038016) 759 NM_008548 17155 Mm.117294 NM_008548 ENSMUSG00000003746 Man1a Man1a1|PCR1 mannosidase 1, alpha protein-coding unique_peak1_25_20_2.76310382186217_5.77386933370985_23.0159930418312 chr5 107398633 107399178 + 23.0159930418312 NA Intergenic Intergenic -4608 NM_001001804 384214 Mm.489863 NM_001001804 ENSMUSG00000033805 Ephx4 Abhd7|Ephxrp|Gm1382 epoxide hydrolase 4 protein-coding common_peak1_161_866_0.6330662109574_10.0764212887005_23.014607489397 chr6 11925210 11926633 + 23.014607489397 NA promoter-TSS (NM_029404) promoter-TSS (NM_029404) 40 NM_001168382 75725 Mm.212411 NM_029404 ENSMUSG00000029629 Phf14 1110001C23Rik|4932409F11Rik|5730446A07Rik|AA623952|AV297001|mKIAA0783 PHD finger protein 14 protein-coding common_peak1_33_456_-1.20590178289754_8.2330994636093_23.0144756826023 chr5 30887512 30888087 + 23.0144756826023 NA Intergenic CpG -1053 NM_174849 231093 Mm.440364 NM_174849 ENSMUSG00000029165 Agbl5 9430057O19Rik|CCP5 ATP/GTP binding protein-like 5 protein-coding common_peak2_411_3337_0.340004266786853_11.874770372756_22.9968610193399 chr1 51474623 51479484 + 22.9968610193399 NA intron (NM_001310548, intron 2 of 5) intron (NM_001310548, intron 2 of 5) 1346 NM_028696 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak2_120_548_0.775904505630249_9.48861459182032_22.9924303365477 chr18 35863925 35866360 + 22.9924303365477 NA Intergenic Intergenic 35324 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_151_1807_-0.53997782545923_10.5501900496856_22.9903060884609 chr9 75433141 75435374 + 22.9903060884609 NA Intergenic Intergenic -7267 NM_001039522 235497 Mm.41508 NM_001006122 ENSMUSG00000042487 Leo1 Gm185 Leo1, Paf1/RNA polymerase II complex component protein-coding common_peak2_54_684_-0.938669159461973_8.9506255981169_22.9879727900124 chr5 105555239 105557398 + 22.9879727900124 NA intron (NM_133897, intron 2 of 3) ORR1D1|LTR|ERVL-MaLR 36847 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak1_44_88_1.65044520659823_7.30095603426551_22.9846406863768 chr18 77767375 77767824 + 22.9846406863768 NA intron (NM_146089, intron 1 of 8) CpG 181 NM_146089 225745 Mm.39293 NM_146089 ENSMUSG00000041840 Haus1 BC024400|Ccdc5|HEI-C HAUS augmin-like complex, subunit 1 protein-coding common_peak2_44_88_1.65044520659823_7.30095603426551_22.9846406863768 chr11 121451849 121452566 + 22.9846406863768 NA exon (NM_029878, exon 1 of 39) exon (NM_029878, exon 1 of 39) 258 NM_029878 108903 Mm.23686 NM_029878 ENSMUSG00000039230 Tbcd 2310057L06Rik|A030005L14Rik|mKIAA0988 tubulin-specific chaperone d protein-coding common_peak2_37_499_-1.13880777007884_8.39638039962267_22.9788620683572 chr19 44135144 44136147 + 22.9788620683572 NA intron (NM_001081077, intron 1 of 13) intron (NM_001081077, intron 1 of 13) 231 NM_001081077 72502 Mm.276109 NM_001081077 ENSMUSG00000025200 Cwf19l1 2610528C06Rik|AI854304|AV336991 CWF19-like 1, cell cycle control (S. pombe) protein-coding common_peak1_357_2746_0.372515701533269_11.6098990458425_22.9708477108582 chr4 107177736 107179941 + 22.9708477108582 NA promoter-TSS (NM_025617) promoter-TSS (NM_025617) 208 NM_029565 56374 Mm.291192 NM_029565 ENSMUSG00000028618 Tmem59 1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18 transmembrane protein 59 protein-coding common_peak1_94_368_0.920992784214816_8.9879733981678_22.970142961308 chr2 118901452 118902917 + 22.970142961308 NA intron (NM_001045523, intron 1 of 6) CpG 569 NM_001045523 228536 Mm.330487 NM_001045523 ENSMUSG00000040007 Bahd1 AL022997|AW541238|Gm117|mKIAA0945 bromo adjacent homology domain containing 1 protein-coding common_peak1_113_498_0.808215025399271_9.3670035180369_22.9655480628081 chr13 52599207 52600535 + 22.9655480628081 NA intron (NM_011518, intron 1 of 13) intron (NM_011518, intron 1 of 13) 2989 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak1_28_402_-1.3059727140154_8.00164967152027_22.9610573856327 chr2 4566717 4567279 + 22.9610573856327 NA intron (NM_001177843, intron 13 of 23) intron (NM_001177843, intron 13 of 23) 7244 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294 FERM domain containing 4A protein-coding common_peak1_32_445_-1.22357995225943_8.18910992379059_22.9549597163953 chr10 93445758 93446498 + 22.9549597163953 NA Intergenic L2|LINE|L2 -7268 NM_001313897 16993 Mm.271071 NM_008517 ENSMUSG00000015889 Lta4h - leukotriene A4 hydrolase protein-coding common_peak2_189_2272_-0.475299867356281_10.9127320351397_22.9542671211291 chr4 155600360 155602631 + 22.9542671211291 NA promoter-TSS (NM_177186) promoter-TSS (NM_177186) 79 NM_177186 320541 Mm.306018 NM_177186 ENSMUSG00000042202 Slc35e2 A530082C11Rik|AI957035 solute carrier family 35, member E2 protein-coding common_peak2_188_2259_-0.476363381197483_10.9039253667038_22.9519957636738 chr3 152911334 152914219 + 22.9519957636738 NA intron (NM_012028, intron 2 of 4) intron (NM_012028, intron 2 of 4) 69431 NM_012028 26938 Mm.40915 NM_012028 ENSMUSG00000039037 St6galnac5 AI851940|Siat7e ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding common_peak2_130_1554_-0.585611603171092_10.3098930634324_22.9499128773264 chr2 27513514 27516232 + 22.9499128773264 NA promoter-TSS (NM_080848) promoter-TSS (NM_080848) -274 NM_080848 140858 Mm.28265 NM_080848 ENSMUSG00000026917 Wdr5 2410008O07Rik|AA408785|AA960360|Big|Big-3 WD repeat domain 5 protein-coding common_peak1_40_531_-1.09383917043576_8.50836285028331_22.949464636093 chr6 97179229 97179783 + 22.949464636093 NA promoter-TSS (NM_001081111) promoter-TSS (NM_001081111) -382 NM_001081111 232286 Mm.30893 NM_001081111 ENSMUSG00000030059 Tmf1 7030402D04Rik|Gm153|Tmf1` TATA element modulatory factor 1 protein-coding common_peak1_46_597_-1.02087058677209_8.71356638081206_22.9485064222248 chr5 135008190 135008971 + 22.9485064222248 NA promoter-TSS (NM_145215) promoter-TSS (NM_145215) -572 NM_001190437 68758 Mm.389700 NM_145215 ENSMUSG00000040532 Abhd11 1110054D16Rik|A630008N09Rik|Wbscr21 abhydrolase domain containing 11 protein-coding common_peak2_114_505_0.803572816277519_9.38477998283307_22.9395322132421 chr1 135282668 135284482 + 22.9395322132421 NA exon (NM_001159624, exon 1 of 10) exon (NM_001159624, exon 1 of 10) 509 NM_145417 215615 Mm.291048 NM_145417 ENSMUSG00000041926 Rnpep - arginyl aminopeptidase (aminopeptidase B) protein-coding common_peak1_194_2334_-0.468157798110845_10.9551279355416_22.9297525301022 chr5 37046521 37048796 + 22.9297525301022 NA Intergenic Intergenic -3199 NM_178394 76071 Mm.85280 NM_178394 ENSMUSG00000063646 Jakmip1 5830437M04Rik|C330021K24Rik|Gababrbp|Marlin-1 janus kinase and microtubule interacting protein 1 protein-coding common_peak2_233_2827_-0.421876127861898_11.2546283408785_22.9246090241193 chr11 6290797 6293148 + 22.9246090241193 NA promoter-TSS (NM_001252288) promoter-TSS (NM_001252288) 375 NM_001252283 18293 Mm.276348 NM_010956 ENSMUSG00000020456 Ogdh 2210403E04Rik|2210412K19Rik|AA409584|d1401|mKIAA4192 oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) protein-coding unique_peak2_24_359_-1.40583790419329_7.78893414423303_22.9215029551843 chr5 24776301 24778047 + 22.9215029551843 NA Intergenic Intergenic -19331 NM_153076 214301 Mm.63484 NM_153076 ENSMUSG00000038135 Crygn - crystallin, gamma N protein-coding unique_peak2_44_574_-1.04123950826711_8.64679839169818_22.9190916609133 chr12 51887126 51888905 + 22.9190916609133 NA exon (NM_177171, exon 32 of 36) exon (NM_177171, exon 32 of 36) -58479 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak2_668_6446_0.248206121958745_12.7785153291283_22.9092332062783 chr8 91069407 91078480 + 22.9092332062783 NA intron (NM_001282000, intron 1 of 20) MLT1G3|LTR|ERVL-MaLR 3886 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 retinoblastoma-like 2 protein-coding common_peak1_323_2389_0.396771802497479_11.4211808041169_22.9090107918165 chr5 24840781 24842640 + 22.9090107918165 NA intron (NM_053075, intron 1 of 7) intron (NM_053075, intron 1 of 7) 651 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak1_298_2132_0.418797468827771_11.2680669847545_22.9077853210439 chr16 3742923 3745306 + 22.9077853210439 NA promoter-TSS (NM_148924) promoter-TSS (NM_148924) 15 NM_148924 74120 Mm.29081 NM_148924 ENSMUSG00000022529 Zfp263 1200014J04Rik|AI326880|AU020888|NT2|mFPM315 zinc finger protein 263 protein-coding common_peak2_261_1766_0.456613248481613_11.0153929487924_22.8959767546804 chr13 6646263 6649536 + 22.8959767546804 NA intron (NM_001291071, intron 1 of 21) intron (NM_001291071, intron 1 of 21) 872 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding common_peak1_242_2942_-0.412595227794231_11.3167742130433_22.8951237996032 chr7 30411398 30414989 + 22.8951237996032 NA promoter-TSS (NM_011662) promoter-TSS (NM_011662) -595 NM_011662 22177 Mm.46301 NM_011662 ENSMUSG00000030579 Tyrobp DAP12|KARAP|Ly83 TYRO protein tyrosine kinase binding protein protein-coding common_peak1_190_2284_-0.473606943958638_10.9211749779661_22.8915830285754 chr3 96727005 96728609 + 22.8915830285754 NA promoter-TSS (NM_028925) promoter-TSS (NM_028925) 196 NM_026406 67845 Mm.386792 NM_026406 ENSMUSG00000028098 Rnf115 2610028E05Rik|AU042696|Zfp364 ring finger protein 115 protein-coding common_peak2_770_7788_0.226513762585316_13.0404792840173_22.8807949088677 chr2 166706357 166715027 + 22.8807949088677 NA intron (NR_105783, intron 2 of 2) MIRb|SINE|MIR 3140 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding common_peak1_80_974_-0.762916325644094_9.54780024581493_22.8722818664703 chr13 55018146 55019605 + 22.8722818664703 NA intron (NM_001206392, intron 1 of 17) intron (NM_001206392, intron 1 of 17) 1944 NM_001206390 212032 Mm.267479 NM_001033245 ENSMUSG00000025877 Hk3 HK III|HK-III hexokinase 3 protein-coding common_peak1_176_2110_-0.494049942152047_10.7966858922711_22.8716553119118 chr4 150924452 150926027 + 22.8716553119118 NA intron (NM_011612, intron 1 of 7) L1M3|LINE|L1 -2760 NM_001077509 21942 Mm.244187 NM_011612 ENSMUSG00000028965 Tnfrsf9 4-1BB|A930040I11Rik|AA408498|AI325004|CDw137|Cd137|ILA|Ly63 tumor necrosis factor receptor superfamily, member 9 protein-coding common_peak1_55_694_-0.927692106406589_8.97702311440758_22.8673416722759 chr13 3536987 3537955 + 22.8673416722759 NA promoter-TSS (NM_008112) promoter-TSS (NM_008112) -604 NM_008112 14569 Mm.153226 NM_008112 ENSMUSG00000021218 Gdi2 GDI-B|GDIB|Gdi3 guanosine diphosphate (GDP) dissociation inhibitor 2 protein-coding common_peak2_101_1213_-0.671269617941869_9.90991789728475_22.8630886180588 chr9 72491418 72493705 + 22.8630886180588 NA promoter-TSS (NM_009359) promoter-TSS (NM_009359) -602 NM_009359 21778 Mm.14485 NM_009359 ENSMUSG00000090626 Tex9 Gm19407|tsec-1 testis expressed gene 9 protein-coding common_peak2_233_1500_0.491982015326812_10.7976992692841_22.8590327250151 chr7 109751412 109753177 + 22.8590327250151 NA promoter-TSS (NM_020050) promoter-TSS (NM_020050) -31 NM_020050 56786 Mm.240668 NM_020050 ENSMUSG00000031021 Tmem9b 2310004K06Rik|AW539847|D7H11orf15|ICRFP703B1614Q5.3 TMEM9 domain family, member B protein-coding common_peak1_54_135_1.39382817713558_7.78437692981813_22.8585691996802 chr6 129754121 129755163 + 22.8585691996802 NA Intergenic RLTR11A2|LTR|ERVK -14158 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak1_357_2748_0.37146570509617_11.610424044061_22.8515303912353 chr1 58392033 58394159 + 22.8515303912353 NA promoter-TSS (NM_025824) promoter-TSS (NM_025824) -40 NM_025824 66882 Mm.21848 NM_025824 ENSMUSG00000051223 Bzw1 1200015E15Rik|mKIAA0005 basic leucine zipper and W2 domains 1 protein-coding common_peak1_243_1594_0.478403364767452_10.878542391036_22.8456353968504 chr1 161250048 161252241 + 22.8456353968504 NA promoter-TSS (NR_130150) promoter-TSS (NR_130150) 66 NR_130150 11758 Mm.186185 NM_007453 ENSMUSG00000026701 Prdx6 1-Cys Prx|1-cysPrx|9430088D19Rik|AA690119|Aop2|Brp-12|CP-3|GPx|Ltw-4|Ltw4|Lvtw-4|NSGPx|ORF06|Prdx5|aiPLA2 peroxiredoxin 6 protein-coding common_peak1_157_1877_-0.526269945354102_10.6118463749767_22.8368336627888 chr2 130423759 130425232 + 22.8368336627888 NA promoter-TSS (NM_178762) promoter-TSS (NM_178762) 146 NM_001114541 319513 Mm.482539 NM_178762 ENSMUSG00000037773 Pced1a A930025D01Rik|AI480484|Fam113a PC-esterase domain containing 1A protein-coding common_peak2_166_1987_-0.510355435874327_10.7019243236251_22.8360526862249 chr7 27472211 27475435 + 22.8360526862249 NA promoter-TSS (NM_133210) promoter-TSS (NM_133210) -17 NM_133210 170742 Mm.200120 NM_133210 ENSMUSG00000055200 Sertad3 AW124805|D1Mgi51|Rbt1|Sei3 SERTA domain containing 3 protein-coding common_peak1_29_412_-1.28134153882174_8.04932720200858_22.829280045824-2 chr8 70864755 70865453 + 22.829280045824 NA Intergenic Intergenic -8096 NM_032397 84036 Mm.32074 NM_032397 ENSMUSG00000002908 Kcnn1 AI854248|KCa2.1|SK1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 protein-coding common_peak1_29_412_-1.28134153882174_8.04932720200858_22.829280045824 chr15 12229436 12230182 + 22.829280045824 NA intron (NM_172958, intron 1 of 15) B4A|SINE|B4 24715 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak2_394_3151_0.348152858535261_11.796128248724_22.8287006745304 chr9 92248979 92253636 + 22.8287006745304 NA intron (NM_011636, intron 1 of 8) intron (NM_011636, intron 1 of 8) 1113 NM_011636 22038 Mm.421956 NM_011636 ENSMUSG00000032369 Plscr1 MmTRA1a|MmTRA1b|Nor1|Tra1|Tra1a|Tra1b|Tras1|Tras2 phospholipid scramblase 1 protein-coding common_peak2_51_121_1.4512962182644_7.65638544669509_22.8228422671424 chr6 129754264 129755146 + 22.8228422671424 NA Intergenic Intergenic -14221 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak2_275_1904_0.44024466023882_11.1156976125001_22.8214784579659 chr7 123368492 123371054 + 22.8214784579659 NA exon (NM_001122643, exon 1 of 20) exon (NM_001122643, exon 1 of 20) 142 NM_001122643 70497 Mm.403318 NM_144529 ENSMUSG00000030766 Arhgap17 5730403H17Rik|Nadrin|Nadrin2|Rich1|Wbp15 Rho GTPase activating protein 17 protein-coding common_peak1_121_557_0.767010450404142_9.50762653703126_22.8153309593057-2 chr14 30715090 30716968 + 22.8153309593057 NA intron (NM_001166532, intron 1 of 20) CpG 414 NM_001166532 54650 Mm.294662 NM_019460 ENSMUSG00000006527 Sfmbt1 4930442N21Rik|9330180L21Rik|AA536974|Sfmbt|Smr Scm-like with four mbt domains 1 protein-coding common_peak1_121_557_0.767010450404142_9.50762653703126_22.8153309593057 chr10 14704850 14705976 + 22.8153309593057 NA promoter-TSS (NM_025418) promoter-TSS (NM_025418) 76 NM_025418 66201 Mm.227983 NM_025418 ENSMUSG00000019868 Vta1 1110001D18Rik|1110059P08Rik|AU040813|C85340|LIP5|SBP1 vesicle (multivesicular body) trafficking 1 protein-coding common_peak1_135_1612_-0.572157528622402_10.3694519588444_22.8067220483527 chr1 132010849 132011927 + 22.8067220483527 NA intron (NM_007923, intron 1 of 4) B4|SINE|B4 3783 NM_007923 13714 Mm.254233 NM_007923 ENSMUSG00000026436 Elk4 2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1 ELK4, member of ETS oncogene family protein-coding common_peak2_277_1924_0.437954361509332_11.1296199112243_22.8038754560114 chr2 30710979 30713383 + 22.8038754560114 NA Intergenic CpG -9029 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_76_256_1.07109699157919_8.54117304498347_22.7961660492448 chr18 80632769 80633838 + 22.7961660492448 NA intron (NM_198429, intron 9 of 9) intron (NM_198429, intron 9 of 9) 74870 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_93_1121_-0.702113561996418_9.78080017961058_22.789802952045 chr6 48705903 48707294 + 22.789802952045 NA intron (NM_153175, intron 1 of 2) (CATA)n|Simple_repeat|Simple_repeat 1646 NM_153175 231931 Mm.321047 NM_153175 ENSMUSG00000047867 Gimap6 4833419H03Rik|Ian6|mFLJ00102 GTPase, IMAP family member 6 protein-coding common_peak2_224_2710_-0.43032517339476_11.1894468111403_22.7880457639416 chr14 14066478 14069717 + 22.7880457639416 NA intron (NM_139227, intron 4 of 11) intron (NM_139227, intron 4 of 11) 52807 NM_025550 66413 Mm.27591 NM_025550 ENSMUSG00000021737 Psmd6 2400006A19Rik proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 protein-coding common_peak2_279_1944_0.435728208209049_11.1434185439781_22.7874668680311 chr2 172999428 173001169 + 22.7874668680311 NA 5' UTR (NM_175112, exon 1 of 12) 5' UTR (NM_175112, exon 1 of 12) 181 NM_175112 66679 Mm.4113 NM_175112 ENSMUSG00000027509 Rae1 3230401I12Rik|D2Ertd342e|MNRP|MNRP41 ribonucleic acid export 1 protein-coding common_peak1_382_3020_0.354799828200479_11.7382103828282_22.777217606535 chr1 6213745 6215768 + 22.777217606535 NA promoter-TSS (NM_009826) promoter-TSS (NM_009826) 94 NM_009826 12421 Mm.293811 NM_009826 ENSMUSG00000025907 Rb1cc1 2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180 RB1-inducible coiled-coil 1 protein-coding common_peak1_143_724_0.682685110529439_9.84317974016702_22.7738957729883 chr1 165641823 165643219 + 22.7738957729883 NA Intergenic CpG -7980 NM_001083897 68481 Mm.46438 NM_001001880 ENSMUSG00000026566 Mpzl1 1110007A10Rik|PZR myelin protein zero-like 1 protein-coding common_peak1_31_433_-1.23868565813295_8.142208403378_22.756329666592 chr6 54950883 54951741 + 22.756329666592 NA intron (NM_172729, intron 1 of 11) intron (NM_172729, intron 1 of 11) 20349 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_389_4906_-0.312964208395691_12.1041434518704_22.7542742457987 chr18 65412876 65417601 + 22.7542742457987 NA intron (NR_105742, intron 3 of 6) intron (NR_105742, intron 3 of 6) -15759 NM_172833 240354 Mm.132613 NM_172833 ENSMUSG00000032688 Malt1 A630046N12|D430033E09Rik|Pcasp1 MALT1 paracaspase protein-coding common_peak2_55_693_-0.925614791373979_8.97598445689127_22.7499560950327 chr17 72835474 72836352 + 22.7499560950327 NA promoter-TSS (NM_027166) promoter-TSS (NM_027166) -791 NM_027166 383295 Mm.277533 NM_027166 ENSMUSG00000039770 Ypel5 2310076K21Rik|CGI-127 yippee-like 5 (Drosophila) protein-coding common_peak2_64_188_1.21467209611182_8.16957847227699_22.743689223984 chr1 65186541 65187495 + 22.743689223984 NA promoter-TSS (NM_001111320) promoter-TSS (NM_001111320) 333 NM_001310624 18711 Mm.38370 NM_011086 ENSMUSG00000025949 Pikfyve 5230400C17Rik|Pip5k|Pip5k3|Pipk5k3|PipkIII|p235 phosphoinositide kinase, FYVE finger containing protein-coding common_peak1_282_1974_0.432505151490936_11.1638895136973_22.7348601882158 chr16 92696478 92698831 + 22.7348601882158 NA promoter-TSS (NM_009821) promoter-TSS (NM_009821) -325 NM_009821 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_168_926_0.611388319903879_10.1621196885775_22.7281221525702 chr1 194997017 195000152 + 22.7281221525702 NA Intergenic Intergenic -18815 NR_015566 320977 Mm.99905 NR_015566 ENSMUSG00000096929 A330023F24Rik C030002C11Rik RIKEN cDNA A330023F24 gene ncRNA common_peak1_108_1293_-0.645879666462871_10.0146820687611_22.726544704656 chr12 25338724 25339905 + 22.726544704656 NA Intergenic Intergenic 210140 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_40_72_1.77161870618541_7.07563391197272_22.7251203717276 chr3 67429933 67430544 + 22.7251203717276 NA 5' UTR (NM_138591, exon 1 of 18) 5' UTR (NM_138591, exon 1 of 18) 123 NM_138591 28030 Mm.122466 NM_138591 ENSMUSG00000027774 Gfm1 AW545374|D3Wsu133e|Gfm G elongation factor, mitochondrial 1 protein-coding common_peak2_146_1743_-0.547173571712959_10.4945975389204_22.7167482472904 chr3 36861043 36864108 + 22.7167482472904 NA promoter-TSS (NM_172679) promoter-TSS (NM_172679) -531 NM_172679 229227 Mm.207907 NM_172679 ENSMUSG00000037270 4932438A13Rik 4732443H21|B830039D19Rik|D630029K19Rik|FSA|Kiaa1109|Tweek RIKEN cDNA 4932438A13 gene protein-coding common_peak1_152_796_0.653369379290268_9.96512060363561_22.7090186260652 chr3 94581764 94583032 + 22.7090186260652 NA exon (NM_029721, exon 1 of 12) exon (NM_029721, exon 1 of 12) 318 NM_001082484 76742 Mm.28160 NM_029721 ENSMUSG00000028136 Snx27 5730552M22Rik|ESTM45|ESTM47|R75405 sorting nexin family member 27 protein-coding common_peak1_341_4247_-0.33732250391434_11.883906798847_22.7035400150204 chr10 96367838 96371109 + 22.7035400150204 NA Intergenic Intergenic 143266 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_37_497_-1.13302541748484_8.39348922332566_22.7030197129574 chr4 152201155 152201958 + 22.7030197129574 NA intron (NM_001146058, intron 1 of 8) intron (NM_001146058, intron 1 of 8) 1712 NM_001146058 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak2_125_1492_-0.595776978996403_10.2461099606363_22.6981961657804 chrX 96095391 96098724 + 22.6981961657804 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 1012 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_21_325_-1.48893041153713_7.60426294846251_22.6970591966195 chr10 84622312 84622757 + 22.6970591966195 NA promoter-TSS (NM_027423) promoter-TSS (NM_027423) 97 NM_027423 70428 Mm.335007 NM_027423 ENSMUSG00000034453 Polr3b 2700078H01Rik|A330032P03Rik|C85372|RPC2 polymerase (RNA) III (DNA directed) polypeptide B protein-coding unique_peak1_26_23_2.63724506611844_5.90358503378038_22.6917906036038 chr14 74905748 74906264 + 22.6917906036038 NA intron (NM_001252132, intron 1 of 18) intron (NM_001252132, intron 1 of 18) 41871 NM_001252132 380916 Mm.288868 NM_001033439 ENSMUSG00000068015 Lrch1 4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding common_peak2_71_870_-0.808618924353485_9.36221944642212_22.684349632778 chr16 95989876 95991737 + 22.684349632778 NA promoter-TSS (NM_019537) promoter-TSS (NM_019537) 97 NM_019537 56088 Mm.396248 NM_019537 ENSMUSG00000022913 Psmg1 AW552102|Dscr2 proteasome (prosome, macropain) assembly chaperone 1 protein-coding common_peak2_80_281_1.02679073059408_8.65294671769584_22.6806503102536 chr14 73552308 73553522 + 22.6806503102536 NA intron (NM_011506, intron 1 of 10) CpG 129 NM_011506 20916 Mm.38951 NM_011506 ENSMUSG00000022110 Sucla2 4930547K18Rik|A-SCS succinate-Coenzyme A ligase, ADP-forming, beta subunit protein-coding common_peak2_605_5651_0.263049270611157_12.5960703856395_22.6729954333544 chr17 87281421 87287565 + 22.6729954333544 NA intron (NM_028639, intron 1 of 19) intron (NM_028639, intron 1 of 19) 1607 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak1_44_572_-1.03621269119227_8.64428498316077_22.6616018566714 chr1 191421648 191422729 + 22.6616018566714 NA Intergenic B1F|SINE|Alu -25147 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak2_174_977_0.595860646449621_10.231620978177_22.6590478360819 chr2 29677076 29680730 + 22.6590478360819 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 59183 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_624_5891_0.257684650857176_12.6533840404644_22.6482276597677 chr3 69155230 69161657 + 22.6482276597677 NA Intergenic B1_Mur1|SINE|Alu 27210 NR_126533 381452 Mm.331067 NM_001243000 ENSMUSG00000094763 Gm1647 - predicted gene 1647 ncRNA common_peak2_262_1779_0.452779493421701_11.0240512725646_22.6295417696412 chr4 151994965 151997473 + 22.6295417696412 NA promoter-TSS (NM_172705) promoter-TSS (NM_172705) -40 NM_172705 230936 Mm.25582 NM_172705 ENSMUSG00000047777 Phf13 BC029632|Phf5|SPOC1 PHD finger protein 13 protein-coding common_peak1_336_4178_-0.33975922817878_11.859062429233_22.6294512541206 chr7 28779883 28782592 + 22.6294512541206 NA intron (NM_022432, intron 8 of 15) intron (NM_022432, intron 8 of 15) 277 NR_040339 100503790 Mm.446894 NR_040339 Gm19897 - predicted gene, 19897 ncRNA common_peak1_50_638_-0.972001343819539_8.83367144903723_22.6282157796628 chr5 72636273 72637055 + 22.6282157796628 NA intron (NM_007723, intron 1 of 8) (TTGG)n|Simple_repeat|Simple_repeat 6088 NM_007723 12788 Mm.436652 NM_007723 ENSMUSG00000067220 Cnga1 Cncg cyclic nucleotide gated channel alpha 1 protein-coding common_peak2_226_1438_0.499093870247433_10.740397811864_22.6275067983331 chrX 85867781 85872989 + 22.6275067983331 NA 5' UTR (NM_001163539, exon 1 of 2) 5' UTR (NM_001163539, exon 1 of 2) 112 NM_001163539 71398 Mm.185296 NM_001163539 ENSMUSG00000025058 5430427O19Rik - RIKEN cDNA 5430427O19 gene protein-coding common_peak1_59_737_-0.892208262276336_9.08137287492223_22.6267734761554 chr1 80381523 80382694 + 22.6267734761554 NA Intergenic L1Md_F2|LINE|L1 -41418 NM_016716 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding unique_peak1_22_13_3.13110588203591_5.37290786307556_22.6194101546506 chr5 24894752 24895323 + 22.6194101546506 NA intron (NM_001310480, intron 3 of 13) intron (NM_001310480, intron 3 of 13) -7532 NR_040684 71161 Mm.443533 NR_040684 ENSMUSG00000086446 Prkag2os1 4933426D04Rik protein kinase, AMP-activated, gamma 2 non-catalytic subunit, opposite strand 1 ncRNA common_peak2_167_919_0.611821526413191_10.151400814151_22.6167102093005 chr14 45387035 45389759 + 22.6167102093005 NA intron (NM_019425, intron 1 of 5) intron (NM_019425, intron 1 of 5) 399 NM_019425 54342 Mm.312945 NM_019425 ENSMUSG00000037722 Gnpnat1 AU017428|AU040593|EMeg32|Gpnat1|Gsnpat glucosamine-phosphate N-acetyltransferase 1 protein-coding common_peak1_78_948_-0.768165185907794_9.50618168406721_22.6143885837666 chr1 164061367 164062790 + 22.6143885837666 NA promoter-TSS (NM_001164059) promoter-TSS (NM_001164059) 2 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak1_78_948_-0.768165185907794_9.50618168406721_22.6143885837666-2 chr11 101626766 101627617 + 22.6143885837666 NA promoter-TSS (NM_025654) promoter-TSS (NM_025654) -758 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding common_peak2_53_131_1.4044257586675_7.7466069986922_22.6082477137519 chr7 39449323 39450155 + 22.6082477137519 NA intron (NM_001243021, intron 1 of 5) intron (NM_001243021, intron 1 of 5) 221 NM_001243021 233147 Mm.148946 NM_001243021 ENSMUSG00000030424 Zfp939 9430025M13Rik zinc finger protein 939 protein-coding common_peak2_137_679_0.699816695295448_9.75929928378543_22.6050237384689 chr17 80479223 80480998 + 22.6050237384689 NA 5' UTR (NM_009231, exon 1 of 22) 5' UTR (NM_009231, exon 1 of 22) 343 NM_009231 20662 Mm.60975 NM_009231 ENSMUSG00000024241 Sos1 4430401P03Rik|9630010N06|AI449023 son of sevenless homolog 1 (Drosophila) protein-coding common_peak1_69_216_1.14650679326541_8.33480462907719_22.5996803977267 chr13 117020764 117022061 + 22.5996803977267 NA intron (NM_001081009, intron 3 of 26) intron (NM_001081009, intron 3 of 26) 4104 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding common_peak2_157_837_0.637904968600321_10.0297589179995_22.5991535554694 chr5 145166356 145168095 + 22.5991535554694 NA promoter-TSS (NM_178576) promoter-TSS (NM_178576) 12 NM_001291248 54188 Mm.196884 NM_178576 ENSMUSG00000029625 Cpsf4 30kDa|C79664 cleavage and polyadenylation specific factor 4 protein-coding common_peak2_252_1683_0.464165794154967_10.9497593201439_22.5990286788563 chr1 127342737 127347185 + 22.5990286788563 NA intron (NM_145128, intron 4 of 17) intron (NM_145128, intron 4 of 17) 139975 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak2_299_2147_0.414596052676968_11.2760763043239_22.5972204677724 chr11 78981898 78985647 + 22.5972204677724 NA intron (NM_010708, intron 1 of 10) intron (NM_010708, intron 1 of 10) 1152 NM_001159301 16859 Mm.341434 NM_010708 ENSMUSG00000001123 Lgals9 AA407335|AI194909|AI265545|LGALS35|Lgals5|gal-9|galectin-9 lectin, galactose binding, soluble 9 protein-coding common_peak1_121_1444_-0.605722015154713_10.1939927698107_22.5960859764694 chr13 21715635 21717383 + 22.5960859764694 NA promoter-TSS (NM_178199) promoter-TSS (NM_178199) 97 NM_178182 319191 Mm.14767 NM_178182 ENSMUSG00000071516 Hist1h2ai H2a-291A histone cluster 1, H2ai protein-coding common_peak1_65_194_1.19660194509763_8.20563128629842_22.5862587411536 chr7 55841953 55842853 + 22.5862587411536 NA intron (NM_001164662, intron 1 of 30) CpG 332 NM_001164661 20430 Mm.37249 NM_011370 ENSMUSG00000030447 Cyfip1 E030028J09Rik|P140SRA-1|P140sra1|Shyc|Sra-1|Sra1|l(7)1Rl|l71Rl|l7Rl1|mKIAA0068|pl-1 cytoplasmic FMR1 interacting protein 1 protein-coding common_peak1_47_604_-1.0004035528835_8.7405895557202_22.5844666722613 chr4 45530697 45531445 + 22.5844666722613 NA promoter-TSS (NM_001033306) promoter-TSS (NM_001033306) -243 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak2_33_453_-1.19639991513039_8.22834852972572_22.5825267986188 chr19 4792978 4794021 + 22.5825267986188 NA intron (NM_001290127, intron 1 of 3) intron (NM_001290127, intron 1 of 3) 402 NM_009032 19653 Mm.426069 NM_009032 ENSMUSG00000094936 Rbm4 4921506I22Rik|Lark1|Mlark|Rbm4a|lark RNA binding motif protein 4 protein-coding common_peak1_33_453_-1.19639991513039_8.22834852972572_22.5825267986188 chr7 16874131 16874922 + 22.5825267986188 NA promoter-TSS (NM_001081655) promoter-TSS (NM_001081655) -791 NM_001081655 629378 Mm.491123 NM_001081655 ENSMUSG00000078794 Dact3 EG666671|naa-3 dishevelled-binding antagonist of beta-catenin 3 protein-coding common_peak1_71_869_-0.806961606490711_9.36139078749073_22.5796597010481 chr11 97188208 97189007 + 22.5796597010481 NA promoter-TSS (NM_008379) promoter-TSS (NM_008379) -715 NM_008379 16211 Mm.251013 NM_008379 ENSMUSG00000001440 Kpnb1 AA409963|IPOB|Impnb karyopherin (importin) beta 1 protein-coding common_peak1_39_518_-1.10184418954075_8.46866863358751_22.571630682183 chr17 78200168 78200687 + 22.571630682183 NA 5' UTR (NM_015800, exon 1 of 17) 5' UTR (NM_015800, exon 1 of 17) 179 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding common_peak1_78_269_1.04528349406248_8.59945734408207_22.5709943598915 chr11 97050406 97051676 + 22.5709943598915 NA intron (NM_001310509, intron 1 of 22) intron (NM_001310509, intron 1 of 22) 221 NM_001081434 71240 Mm.190450 NM_001081434 ENSMUSG00000038534 Osbpl7 4933437E18Rik oxysterol binding protein-like 7 protein-coding common_peak1_25_368_-1.37205576141946_7.84144912535066_22.5693284404784 chr5 114131125 114131620 + 22.5693284404784 NA exon (NM_001040691, exon 2 of 7) exon (NM_001040691, exon 2 of 7) 216 NM_011677 22256 Mm.1393 NM_011677 ENSMUSG00000029591 Ung UNG1|UNG2 uracil DNA glycosylase protein-coding common_peak2_255_3104_-0.397675045237252_11.4015400304892_22.559012133308 chr17 7925157 7929603 + 22.559012133308 NA exon (NM_145968, exon 4 of 10) exon (NM_145968, exon 4 of 10) 1380 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding common_peak2_334_2509_0.385177638189912_11.4860604679331_22.5566072942604 chr12 31948735 31950405 + 22.5566072942604 NA intron (NM_177993, intron 1 of 8) CpG 965 NM_177993 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding common_peak1_88_1061_-0.719549682039965_9.69279320978417_22.5520210829399 chrX 8145185 8146436 + 22.5520210829399 NA promoter-TSS (NM_001166409) promoter-TSS (NM_001166409) 70 NM_001166410 19652 Mm.128512 NM_016809 ENSMUSG00000031167 Rbm3 2600016C11Rik RNA binding motif protein 3 protein-coding common_peak1_67_825_-0.833237088072563_9.27337942738317_22.5515344691525 chr3 89436390 89437582 + 22.5515344691525 NA intron (NM_146131, intron 1 of 10) intron (NM_146131, intron 1 of 10) 282 NM_146131 229534 Mm.65906 NM_146131 ENSMUSG00000042613 Pbxip1 4732463H20Rik pre B cell leukemia transcription factor interacting protein 1 protein-coding common_peak2_134_656_0.710563593395586_9.71503135702012_22.5447456986378 chr11 98772944 98775485 + 22.5447456986378 NA intron (NM_145434, intron 1 of 7) intron (NM_145434, intron 1 of 7) 1163 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding common_peak1_213_1320_0.518167979295301_10.6264987408945_22.5387235479992 chr2 14073507 14074940 + 22.5387235479992 NA promoter-TSS (NR_038162) promoter-TSS (NR_038162) 111 NM_011484 20844 Mm.273174 NM_011484 ENSMUSG00000026718 Stam STAM1 signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 protein-coding common_peak2_452_3812_0.315944085412719_12.0546828584325_22.5249972677211 chr12 102352715 102360147 + 22.5249972677211 NA intron (NM_001161365, intron 4 of 9) intron (NM_001161365, intron 4 of 9) 72790 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_145_742_0.671712937033391_9.87307486905529_22.5249143369396 chr12 25138044 25141084 + 22.5249143369396 NA Intergenic Intergenic 10390 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_104_438_0.847503101141461_9.20182868010609_22.5213327545545 chr6 97148138 97149510 + 22.5213327545545 NA promoter-TSS (NM_175313) promoter-TSS (NM_175313) 59 NM_175313 101351 Mm.116802 NM_175313 ENSMUSG00000035245 Eogt A130022J15Rik|AI447490|AW214473|AW259391|Aer61 EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding common_peak2_101_1209_-0.666508243848144_9.90753721023788_22.5069008960376 chr9 106366733 106370336 + 22.5069008960376 NA promoter-TSS (NM_153459) promoter-TSS (NM_153459) -98 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding common_peak1_231_1486_0.490311316019216_10.783344590062_22.4927514780224 chr4 95160726 95162275 + 22.4927514780224 NA Intergenic Intergenic -109278 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_130_626_0.724765629044834_9.65470444732446_22.492367660146 chr8 84126009 84128477 + 22.492367660146 NA exon (NM_001013384, exon 3 of 10) exon (NM_001013384, exon 3 of 10) 1254 NM_001013384 244550 Mm.334654 NM_001013384 ENSMUSG00000012889 Podnl1 5832418A03Rik|Gm506 podocan-like 1 protein-coding common_peak1_26_377_-1.34003485738148_7.89222499553033_22.489749311064 chr15 78923888 78924411 + 22.489749311064 NA Intergenic ID_B1|SINE|B4 -2576 NM_008495 16852 Mm.43831 NM_008495 ENSMUSG00000068220 Lgals1 AA410090|Gal-1|Galbp|L-14.5|L14|Lect14|galectin-1 lectin, galactose binding, soluble 1 protein-coding common_peak1_108_466_0.824463495819975_9.27951048761965_22.4808152963382 chr12 8207683 8208850 + 22.4808152963382 NA intron (NM_001167767, intron 1 of 5) CpG 139 NM_001167767 68832 Mm.25608 NM_172401 ENSMUSG00000037669 Ldah 1110057K04Rik|mLDAH lipid droplet associated hydrolase protein-coding common_peak2_283_1988_0.428556607385984_11.1721058645267_22.4794746924591 chr11 22850083 22855313 + 22.4794746924591 NA intron (NM_001169114, intron 1 of 1) intron (NM_001169114, intron 1 of 1) 7037 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak1_31_431_-1.23202192785194_8.1388765382375_22.4624640001611 chr15 62456608 62457274 + 22.4624640001611 NA Intergenic Intergenic -237490 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_92_1106_-0.701622785893962_9.76162811383457_22.4614105595792 chrX 107254248 107259244 + 22.4614105595792 NA intron (NM_001177781, intron 2 of 4) intron (NM_001177781, intron 2 of 4) 718 NM_001033251 213439 Mm.383562 NM_001033251 ENSMUSG00000073008 Gpr174 Gm376|Lypsr3 G protein-coupled receptor 174 protein-coding common_peak2_120_1430_-0.606241112091219_10.1796874006811_22.4592556341083 chr9 69441849 69446155 + 22.4592556341083 NA Intergenic Intergenic -9681 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding common_peak2_97_391_0.888778703981833_9.05909919610612_22.4572395522474 chr12 3833510 3835313 + 22.4572395522474 NA intron (NM_001271753, intron 1 of 22) intron (NM_001271753, intron 1 of 22) 27251 NM_001271753 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding common_peak1_84_307_0.98485530715759_8.7592141942737_22.4555358381895 chr12 110487523 110489004 + 22.4555358381895 NA intron (NM_012023, intron 1 of 13) intron (NM_012023, intron 1 of 13) 2524 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_46_593_-1.01118803337475_8.70872510411339_22.4438804124474 chr3 93550082 93550876 + 22.4438804124474 NA Intergenic Intergenic -4638 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak1_39_517_-1.09906174886942_8.46727741325184_22.4372181467887 chr16 44811711 44812347 + 22.4372181467887 NA Intergenic Intergenic -8699 NM_207244 239849 Mm.445045 NM_207244 ENSMUSG00000062082 Cd200r4 F630107N04Rik|MCD200RLa CD200 receptor 4 protein-coding common_peak1_262_1782_0.450350031650467_11.0252660034502_22.4094012500356 chr16 3975046 3977965 + 22.4094012500356 NA 5' UTR (NM_001081280, exon 1 of 18) 5' UTR (NM_001081280, exon 1 of 18) 127 NM_175547 268857 Mm.215994 NM_175547 ENSMUSG00000049871 Nlrc3 CLR16.2|D230007K08Rik|mFLJ00348 NLR family, CARD domain containing 3 protein-coding common_peak1_430_3562_0.325678935014949_11.9617162356408_22.4063222567428 chr13 107888463 107892061 + 22.4063222567428 NA promoter-TSS (NM_145456) promoter-TSS (NM_145456) -198 NM_145456 67263 Mm.490418 NM_145456 ENSMUSG00000032846 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding unique_peak1_30_36_2.25722883910536_6.33806778518163_22.393721713303-2 chr15 59597346 59597897 + 22.393721713303 NA intron (NM_026746, intron 6 of 6) B4|SINE|B4 -51033 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding unique_peak1_30_36_2.25722883910536_6.33806778518163_22.393721713303 chr11 83592658 83593178 + 22.393721713303 NA exon (NM_009139, exon 1 of 4) exon (NM_009139, exon 1 of 4) 169 NM_009139 20305 Mm.137 NM_009139 ENSMUSG00000018927 Ccl6 MRP-1|Scya6|c10 chemokine (C-C motif) ligand 6 protein-coding common_peak1_177_1005_0.585216090145018_10.267022634878_22.391096779822 chr1 128244037 128245200 + 22.391096779822 NA intron (NM_026390, intron 1 of 12) CpG 437 NM_026390 67812 Mm.293321 NM_026390 ENSMUSG00000026353 Ubxn4 1300013G12Rik|Ubxd2|mKIAA0242 UBX domain protein 4 protein-coding common_peak2_60_168_1.26364001476479_8.03269944366458_22.3903502326381 chr2 39325031 39326305 + 22.3903502326381 NA Intergenic SRV_MM-int|LTR|ERVK -99330 NM_024209 67857 Mm.389242 NM_024209 ENSMUSG00000026753 Ppp6c 2310003C10Rik protein phosphatase 6, catalytic subunit protein-coding common_peak1_178_1014_0.58228057335023_10.2784042987477_22.3898279243579 chr13 9093826 9095089 + 22.3898279243579 NA intron (NM_001311117, intron 1 of 16) intron (NM_001311117, intron 1 of 16) 576 NM_172585 217980 Mm.234944 NM_172585 ENSMUSG00000033499 Larp4b A630096F19|AI256361|D13Wsu64e|Larp5 La ribonucleoprotein domain family, member 4B protein-coding common_peak1_197_2363_-0.458947545177011_10.977540547589_22.3813969643727 chr16 94312515 94314193 + 22.3813969643727 NA Intergenic CpG -15068 NM_133229 170765 Mm.42604 NM_133229 ENSMUSG00000022941 Ripply3 Dscr6 ripply transcriptional repressor 3 protein-coding common_peak1_29_409_-1.27082366690774_8.04406826605157_22.3776586962329 chr15 103240031 103240291 + 22.3776586962329 NA promoter-TSS (NR_104427) promoter-TSS (NR_104427) -236 NR_104427 15382 Mm.237064 NM_010447 ENSMUSG00000046434 Hnrnpa1 HDP-1|Hdp|Hnrpa1|hnRNP A1|hnrnp-A1 heterogeneous nuclear ribonucleoprotein A1 protein-coding common_peak2_65_195_1.18922241473203_8.20932105148122_22.3690112474029 chr11 48982458 48983718 + 22.3690112474029 NA Intergenic Intergenic -3690 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5|OTTMUSG00000005540 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak2_142_1690_-0.551470597827556_10.4479256454962_22.368612026904 chr13 114884927 114889089 + 22.368612026904 NA intron (NM_008396, intron 2 of 29) MER33|DNA|hAT-Charlie 45033 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_174_980_0.591441975182615_10.2338303138105_22.3628695783209 chr9 7183698 7185412 + 22.3628695783209 NA promoter-TSS (NM_029775) promoter-TSS (NM_029775) -11 NM_029775 76863 Mm.27293 NM_029775 ENSMUSG00000032002 Dcun1d5 3110001A18Rik|4833420K19Rik|AW060460|D430047L21Rik DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) protein-coding common_peak1_96_385_0.892881326095329_9.03889770031574_22.3615835355826 chr17 56218134 56219069 + 22.3615835355826 NA intron (NM_172624, intron 1 of 20) (CGCGG)n|Simple_repeat|Simple_repeat 288 NM_172624 224897 Mm.205535 NM_172624 ENSMUSG00000001229 Dpp9 6430584G11Rik|A330078I11|DPP IX|DPRP2 dipeptidylpeptidase 9 protein-coding common_peak2_49_113_1.479737489158_7.57275875874374_22.3549429562407 chr19 55099496 55100111 + 22.3549429562407 NA promoter-TSS (NM_008149) promoter-TSS (NM_008149) -356 NM_008149 14732 Mm.210196 NM_008149 ENSMUSG00000024978 Gpam GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding common_peak1_136_1618_-0.564549713767708_10.3786124134187_22.3318192076835 chr15 102404646 102405992 + 22.3318192076835 NA promoter-TSS (NM_013672) promoter-TSS (NM_013672) -997 NM_013672 20683 Mm.4618 NM_013672 ENSMUSG00000001280 Sp1 1110003E12Rik|AA450830|AI845540|Sp1-1 trans-acting transcription factor 1 protein-coding common_peak2_955_10363_0.195035836285195_13.4368112183227_22.3285405841518 chr9 32921048 32934164 + 22.3285405841518 NA intron (NR_131058, intron 1 of 3) intron (NR_131058, intron 1 of 3) 1360 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak2_104_1242_-0.654030350375665_9.95259540586465_22.3174395989554 chr11 96440607 96442935 + 22.3174395989554 NA Intergenic Intergenic 22776 NR_033524 100038600 Mm.483549 NR_033524 Gm11529 OTTMUSG00000001775 predicted gene 11529 ncRNA common_peak2_167_922_0.607124739711793_10.1537492075017_22.3117619178522 chr6 122308450 122310464 + 22.3117619178522 NA intron (NM_010749, intron 1 of 6) intron (NM_010749, intron 1 of 6) 447 NM_010749 17113 Mm.249225 NM_010749 ENSMUSG00000007458 M6pr CD-MPR|Mpr46 mannose-6-phosphate receptor, cation dependent protein-coding common_peak1_284_2001_0.425378047592503_11.1799152826322_22.2961688655099 chr6 71493249 71495244 + 22.2961688655099 NA 5' UTR (NM_001308303, exon 1 of 4) 5' UTR (NM_001308303, exon 1 of 4) 369 NM_001308303 22644 Mm.422969 NM_009543 ENSMUSG00000052656 Rnf103 AW146237|AW212918|Zfp103|kf-1 ring finger protein 103 protein-coding common_peak1_536_4810_0.281558017493831_12.3729000928291_22.2878254046167 chr13 33002306 33007571 + 22.2878254046167 NA intron (NM_009256, intron 1 of 6) intron (NM_009256, intron 1 of 6) 397 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding common_peak1_229_1470_0.490597170903355_10.7678801167065_22.2871653628134 chr2 15054185 15056271 + 22.2871653628134 NA promoter-TSS (NM_029466) promoter-TSS (NM_029466) -134 NM_029466 75869 Mm.174068 NM_029466 ENSMUSG00000017418 Arl5b 4930587A11Rik|AW146430|Arl8 ADP-ribosylation factor-like 5B protein-coding unique_peak1_21_11_3.2748352419728_5.22238012170755_22.2812131706461 chr4 123342705 123343105 + 22.2812131706461 NA 5' UTR (NM_001256019, exon 1 of 7) 5' UTR (NM_001256019, exon 1 of 7) 347 NM_001256019 12163 Mm.439749 NM_007558 ENSMUSG00000032726 Bmp8a Bmp7r1|OP-2|OP2 bone morphogenetic protein 8a protein-coding common_peak1_109_1299_-0.636392578343544_10.026099618744_22.2783334853185 chr10 81320692 81321844 + 22.2783334853185 NA exon (NM_027381, exon 1 of 9) exon (NM_027381, exon 1 of 9) 165 NM_027381 70312 Mm.87628 NM_027381 ENSMUSG00000034889 Cactin 2510012J08Rik cactin, spliceosome C complex subunit protein-coding common_peak1_24_355_-1.38971823883001_7.78087431155139_22.2781021072091 chr7 30394658 30395144 + 22.2781021072091 NA Intergenic Intergenic -18887 NM_011662 22177 Mm.46301 NM_011662 ENSMUSG00000030579 Tyrobp DAP12|KARAP|Ly83 TYRO protein tyrosine kinase binding protein protein-coding unique_peak2_43_559_-1.04287296306466_8.60784653541264_22.2744481336487 chr9 118423121 118425250 + 22.2744481336487 NA Intergenic L2b|LINE|L2 -5654 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak2_152_800_0.64614686087203_9.96873186284473_22.2724392047608 chr8 124281264 124284093 + 22.2724392047608 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 51284 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_68_833_-0.821308253197868_9.29324944684573_22.271366129342 chr11 119676389 119677716 + 22.271366129342 NA intron (NM_028898, intron 3 of 33) intron (NM_028898, intron 3 of 33) 74147 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak2_220_1387_0.503749323470744_10.6906665143136_22.2596824222487 chr2 26909765 26912041 + 22.2596824222487 NA promoter-TSS (NM_013721) promoter-TSS (NM_013721) 96 NM_013721 27176 Mm.328601 NM_013721 ENSMUSG00000062647 Rpl7a Surf3 ribosomal protein L7A protein-coding unique_peak2_9_193_-2.13539092574271_6.53221737931577_22.2542593675255 chr8 69984683 69985968 + 22.2542593675255 NA intron (NM_001286450, intron 1 of 12) intron (NM_001286450, intron 1 of 12) -10942 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_95_1138_-0.686551941243303_9.81027606108646_22.2521305693885 chr13 114909646 114911605 + 22.2521305693885 NA intron (NM_008396, intron 1 of 29) (TG)n|Simple_repeat|Simple_repeat 21416 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_137_682_0.693465863143061_9.76247469986162_22.2513176486794 chr2 165033720 165034965 + 22.2513176486794 NA intron (NM_144892, intron 1 of 7) CpG 437 NM_144892 228869 Mm.233080 NM_144892 ENSMUSG00000039804 Ncoa5 CIA nuclear receptor coactivator 5 protein-coding common_peak1_93_366_0.910107145769162_8.97468982572779_22.2395576630185 chr1 57377388 57378279 + 22.2395576630185 NA promoter-TSS (NR_037999) promoter-TSS (NR_037999) 213 NM_028546 73467 Mm.263673 NM_028546 ENSMUSG00000038323 1700066M21Rik AI428479 RIKEN cDNA 1700066M21 gene protein-coding common_peak2_284_2002_0.424657600615788_11.1802755061206_22.2273353116245 chr6 71493164 71495238 + 22.2273353116245 NA 5' UTR (NM_001308303, exon 1 of 4) 5' UTR (NM_001308303, exon 1 of 4) 324 NM_001308303 22644 Mm.422969 NM_009543 ENSMUSG00000052656 Rnf103 AW146237|AW212918|Zfp103|kf-1 ring finger protein 103 protein-coding common_peak1_83_1001_-0.737967527023997_9.59968302968321_22.21980845916 chr17 32320235 32321313 + 22.21980845916 NA TTS (NM_017476) TTS (NM_017476) 464 NM_019774 56399 Mm.328945 NM_019774 ENSMUSG00000024045 Akap8 1200016A02Rik|AA673585|AKAP-8|AKAP95|AU015639 A kinase (PRKA) anchor protein 8 protein-coding common_peak1_199_1198_0.53823618228123_10.4967340345548_22.211532327815 chr14 75186115 75189160 + 22.211532327815 NA intron (NM_008879, intron 2 of 16) intron (NM_008879, intron 2 of 16) 51212 NM_008879 18826 Mm.153911 NM_008879 ENSMUSG00000021998 Lcp1 AW536232|D14Ertd310e|LCP-1|Pls2|pp65 lymphocyte cytosolic protein 1 protein-coding common_peak1_221_2662_-0.428306234659562_11.1646835958808_22.2070097050428 chr3 101285842 101288167 + 22.2070097050428 NA intron (NM_013486, intron 2 of 4) intron (NM_013486, intron 2 of 4) 935 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding common_peak1_28_397_-1.28796130603108_7.99264396752811_22.1989431468233 chr17 47008760 47009439 + 22.1989431468233 NA intron (NM_146078, intron 1 of 46) intron (NM_146078, intron 1 of 46) 1433 NM_146078 224826 Mm.28234 NM_146078 ENSMUSG00000023977 Ubr2 9930021A08Rik|AI462103|AW540746|E130209G04Rik|ENSMUSG00000043296|mKIAA0349 ubiquitin protein ligase E3 component n-recognin 2 protein-coding common_peak2_36_483_-1.13907958606318_8.349323444243_22.1949773923723 chr6 83077891 83078971 + 22.1949773923723 NA promoter-TSS (NM_197992) promoter-TSS (NM_197992) 41 NM_197992 69837 Mm.12261 NM_197992 ENSMUSG00000069678 Pcgf1 2010002K04Rik|AU024121|Nspc1 polycomb group ring finger 1 protein-coding common_peak2_155_1844_-0.523237028967184_10.5877865864642_22.1891008877601 chr1 131525392 131527678 + 22.1891008877601 NA intron (NM_001081011, intron 1 of 22) CpG 826 NM_001081011 14270 Mm.276259 NM_019520 ENSMUSG00000026425 Srgap2 9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding common_peak2_362_2813_0.362294747552198_11.6395539870126_22.1883589838008 chr9 100641931 100645171 + 22.1883589838008 NA promoter-TSS (NM_009282) promoter-TSS (NM_009282) -72 NM_009282 20842 Mm.42135 NM_009282 ENSMUSG00000037286 Stag1 AU045003|SA-1|Scc3 stromal antigen 1 protein-coding unique_peak1_28_30_2.39446700412569_6.15142981244972_22.187475679747 chr2 26481827 26482490 + 22.187475679747 NA intron (NM_008714, intron 4 of 33) intron (NM_008714, intron 4 of 33) -12039 NR_105962 102465602 NR_105962 ENSMUSG00000098548 Mir6996 Gm27531|mmu-mir-6996 microRNA 6996 ncRNA common_peak2_92_1103_-0.697707735890578_9.75967058883288_22.1841032227968 chr19 6941029 6943062 + 22.1841032227968 NA promoter-TSS (NM_001285453) promoter-TSS (NM_001285453) 184 NM_007522 12015 Mm.4387 NM_007522 ENSMUSG00000024959 Bad AI325008|Bbc2 BCL2-associated agonist of cell death protein-coding common_peak1_27_386_-1.30962500612648_7.94137725308117_22.1818112883295 chr16 13818707 13819189 + 22.1818112883295 NA promoter-TSS (NM_010946) promoter-TSS (NM_010946) -329 NM_010946 18203 Mm.380410 NM_010946 ENSMUSG00000022681 Ntan1 PNAA|PNAD N-terminal Asn amidase protein-coding common_peak2_298_2143_0.411376528710571_11.2717774548131_22.170408584943 chr3 65527281 65530113 + 22.170408584943 NA non-coding (NR_027955, exon 2 of 2) non-coding (NR_027955, exon 2 of 2) 250 NM_178892 99929 Mm.246398 NM_178892 ENSMUSG00000034640 Tiparp ARTD14|AW558171|PARP7 TCDD-inducible poly(ADP-ribose) polymerase protein-coding common_peak2_489_4250_0.298007591336187_12.2025903393073_22.1685409636511 chr4 132038299 132042636 + 22.1685409636511 NA intron (NM_183428, intron 1 of 20) intron (NM_183428, intron 1 of 20) 8611 NM_001128606 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding unique_peak2_53_666_-0.932723073158634_8.91518141460527_22.1633533478088 chr11 115954095 115956392 + 22.1633533478088 NA intron (NM_020483, intron 4 of 10) intron (NM_020483, intron 4 of 10) -19482 NM_001005608 192897 Mm.213873 NM_133663 ENSMUSG00000020758 Itgb4 AA407042|C230078O20|CD104 integrin beta 4 protein-coding common_peak1_124_1473_-0.591400030080367_10.2298207940549_22.1591395707086 chr3 107331982 107333044 + 22.1591395707086 NA exon (NM_001045807, exon 1 of 2) exon (NM_001045807, exon 1 of 2) 776 NM_001045807 229700 Mm.27966 NM_001045807 ENSMUSG00000048109 Rbm15 C230088J01Rik|mKIAA1438 RNA binding motif protein 15 protein-coding common_peak1_60_169_1.25512851490927_8.03695519359234_22.1586895179672 chr2 39325301 39326485 + 22.1586895179672 NA Intergenic Intergenic -99555 NM_024209 67857 Mm.389242 NM_024209 ENSMUSG00000026753 Ppp6c 2310003C10Rik protein phosphatase 6, catalytic subunit protein-coding common_peak2_65_196_1.18188043939086_8.21299203915181_22.153314443174 chr7 16680530 16681763 + 22.153314443174 NA Intergenic RMER13B|LTR|ERVK -5441 NM_175315 101434 Mm.102767 NM_175315 ENSMUSG00000078795 Ceacam15 AA407838|C430002N04Rik carcinoembryonic antigen-related cell adhesion molecule 15 protein-coding common_peak1_98_1171_-0.673302390608084_9.85810565911821_22.1512797356349 chr19 3323214 3324539 + 22.1512797356349 NA intron (NM_013495, intron 1 of 18) CpG 575 NM_013495 12894 Mm.18522 NM_013495 ENSMUSG00000024900 Cpt1a C730027G07|CPTI|Cpt1 carnitine palmitoyltransferase 1a, liver protein-coding common_peak1_44_568_-1.02610620474195_8.63923173993561_22.1496151701395 chr11 97988283 97988966 + 22.1496151701395 NA TTS (NM_207231) TTS (NM_207231) -2178 NM_001163608 72324 Mm.39617 NM_028199 ENSMUSG00000017417 Plxdc1 2410003I07Rik|AI848450|Tem7 plexin domain containing 1 protein-coding common_peak2_210_1297_0.518524671139824_10.601337003569_22.1488761182193 chr13 51746709 51750080 + 22.1488761182193 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 45353 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_80_284_1.01152397394077_8.66058009602249_22.137087809883 chr16 23609004 23610363 + 22.137087809883 NA promoter-TSS (NM_023386) promoter-TSS (NM_023386) -236 NM_023386 67775 Mm.475107 NM_023386 ENSMUSG00000033355 Rtp4 5830458K16Rik|Ifrg28 receptor transporter protein 4 protein-coding common_peak2_200_1208_0.535079687053882_10.5071383727761_22.1349554527805 chr15 6707331 6709678 + 22.1349554527805 NA intron (NM_030168, intron 1 of 37) CpG 123 NM_030168 78757 Mm.275811 NM_030168 ENSMUSG00000050310 Rictor 4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik RPTOR independent companion of MTOR, complex 2 protein-coding common_peak2_57_153_1.30848908500402_7.92103108319691_22.1342210744842 chr5 67394338 67395328 + 22.1342210744842 NA 3' UTR (NM_001164806, exon 5 of 5) 3' UTR (NM_001164806, exon 5 of 5) 32966 NM_001164806 666938 Mm.101339 NM_001164806 ENSMUSG00000092060 Bend4 D330027G24Rik|EG666938 BEN domain containing 4 protein-coding common_peak2_76_921_-0.771901399656272_9.4626722406012_22.1276378964335 chrX 74084454 74086518 + 22.1276378964335 NA intron (NM_010788, intron 1 of 3) CpG 204 NM_010788 17257 Mm.131408 NM_010788 ENSMUSG00000031393 Mecp2 1500041B07Rik|D630021H01Rik|Mbd5|WBP10 methyl CpG binding protein 2 protein-coding common_peak1_48_109_1.49551652338602_7.52911797521767_22.1265359201469 chr18 3507935 3508544 + 22.1265359201469 NA exon (NM_026505, exon 1 of 3) exon (NM_026505, exon 1 of 3) 282 NM_026505 68010 Mm.284863 NM_026505 ENSMUSG00000024232 Bambi 2610003H06Rik BMP and activin membrane-bound inhibitor protein-coding common_peak1_16_269_-1.67327933607666_7.2401759290125_22.122465709947-2 chr9 40482443 40482891 + 22.122465709947 NA Intergenic B1_Mus1|SINE|Alu -26903 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak1_16_269_-1.67327933607666_7.2401759290125_22.122465709947 chr1 138172242 138172585 + 22.122465709947 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 2713 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak2_123_577_0.74498114460634_9.54741625480385_22.121716550983 chr13 101662180 101664755 + 22.121716550983 NA Intergenic Intergenic 29163 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_225_1435_0.494291775535707_10.7349859215909_22.1180921352446 chr1 163929574 163930978 + 22.1180921352446 NA intron (NM_001286003, intron 1 of 13) CpG 511 NM_028776 240880 Mm.389213 NM_028776 ENSMUSG00000026584 Scyl3 1200016D23Rik|6030457O16|AW214499|Pace1 SCY1-like 3 (S. cerevisiae) protein-coding common_peak2_213_1325_0.512717670429542_10.6292238953274_22.1152837049941 chr14 105954100 105957645 + 22.1152837049941 NA Intergenic Intergenic -59053 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty homolog 2 (Drosophila) protein-coding common_peak2_153_1819_-0.526388883126636_10.5665282935227_22.1151109605757 chr7 127840532 127842911 + 22.1151109605757 NA promoter-TSS (NM_009294) promoter-TSS (NM_009294) -87 NM_009294 20909 Mm.24867 NM_009294 ENSMUSG00000030805 Stx4a Stx4|Syn-4|Syn4 syntaxin 4A (placental) protein-coding common_peak1_1171_13533_0.170517612355994_13.8095594793876_22.1046945428857 chr11 83532264 83542784 + 22.1046945428857 NA Intergenic B2_Mm1t|SINE|B2 -7006 NM_013653 20304 Mm.284248 NM_013653 ENSMUSG00000035042 Ccl5 MuRantes|RANTES|SISd|Scya5|TCP228 chemokine (C-C motif) ligand 5 protein-coding unique_peak1_19_7_3.69113422763078_4.84556711381539_22.0990545760297-3 chr7 141790713 141791157 + 22.0990545760297 NA intron (NM_010844, intron 3 of 49) intron (NM_010844, intron 3 of 49) 1924 NM_010844 17833 Mm.334332 NM_010844 ENSMUSG00000037974 Muc5ac 2210005L13Rik|MGM mucin 5, subtypes A and C, tracheobronchial/gastric protein-coding unique_peak1_19_7_3.69113422763078_4.84556711381539_22.0990545760297 chr1 191423572 191424016 + 22.0990545760297 NA Intergenic Intergenic -26753 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding unique_peak1_19_7_3.69113422763078_4.84556711381539_22.0990545760297-2 chr19 23352486 23352936 + 22.0990545760297 NA intron (NM_174857, intron 8 of 13) MER34A|LTR|ERV1 -78814 NM_001252684 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding common_peak1_616_5804_0.256348565217396_12.6312546343616_22.0972411257189 chr11 97658597 97664611 + 22.0972411257189 NA Intergenic Intergenic -1808 NM_139311 246198 Mm.23685 NM_139311 ENSMUSG00000038437 Mllt6 AI315037|Af17 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6 protein-coding common_peak2_184_1068_0.565843100369241_10.3449676879051_22.0877004820451 chr11 106919537 106921484 + 22.0877004820451 NA 5' UTR (NM_025481, exon 1 of 19) 5' UTR (NM_025481, exon 1 of 19) 205 NM_025481 66313 Mm.340955 NM_025481 ENSMUSG00000018363 Smurf2 2810411E22Rik|AI558114|AI649275 SMAD specific E3 ubiquitin protein ligase 2 protein-coding common_peak1_267_3251_-0.383343219552591_11.4754399322987_22.0854402218937 chr19 37559824 37562887 + 22.0854402218937 NA intron (NM_175353, intron 1 of 21) intron (NM_175353, intron 1 of 21) 10937 NM_175353 107371 Mm.24865 NM_175353 ENSMUSG00000053799 Exoc6 4833405E05Rik|AW413330|C430002C19|Sec15|Sec15l1|hbd|msec15 exocyst complex component 6 protein-coding common_peak1_119_548_0.761218715965217_9.48127169698781_22.085363284353 chr4 129376699 129378090 + 22.085363284353 NA intron (NM_028603, intron 1 of 4) GC_rich|Low_complexity|Low_complexity 634 NM_028603 73680 Mm.32997 NM_028603 ENSMUSG00000028807 Zbtb8a 2410081M15Rik|AI480941 zinc finger and BTB domain containing 8a protein-coding common_peak1_158_850_0.626860959910434_10.0464458016412_22.0736344493639 chr11 106919301 106920823 + 22.0736344493639 NA intron (NM_025481, intron 1 of 18) intron (NM_025481, intron 1 of 18) 653 NM_025481 66313 Mm.340955 NM_025481 ENSMUSG00000018363 Smurf2 2810411E22Rik|AI558114|AI649275 SMAD specific E3 ubiquitin protein ligase 2 protein-coding common_peak2_340_2580_0.376349191768188_11.5218890219781_22.0735175915602 chr17 12753833 12761282 + 22.0735175915602 NA intron (NM_010515, intron 1 of 47) intron (NM_010515, intron 1 of 47) 12149 NM_010515 16004 Mm.26553 NM_010515 ENSMUSG00000023830 Igf2r AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300 insulin-like growth factor 2 receptor protein-coding common_peak1_192_2296_-0.462729848931666_10.9341702169121_22.0715940996607 chr13 33076030 33078997 + 22.0715940996607 NA Intergenic MLT-int|LTR|ERVL-MaLR -6590 NM_173052 282663 Mm.314490 NM_173052 ENSMUSG00000051029 Serpinb1b 6330533H24Rik|EIB|Serpin1b1|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1b protein-coding common_peak1_142_1686_-0.548053911705139_10.446217302435_22.0694988325194 chr7 127016014 127017344 + 22.0694988325194 NA TTS (NM_001102563) TTS (NM_001102563) 673 NM_030240 67278 Mm.345385 NM_030240 ENSMUSG00000030680 Pagr1a 2900092E17Rik|C77040|PA1|PAGR1 PAXIP1 associated glutamate rich protein 1A protein-coding common_peak1_146_754_0.660677918851526_9.89067179363821_22.069342973191 chr11 73176374 73177901 + 22.069342973191 NA promoter-TSS (NM_001168470) promoter-TSS (NM_001168470) 54 NM_029564 76281 Mm.371656 NM_029564 ENSMUSG00000040158 Tax1bp3 1300011C24Rik|TIP-1 Tax1 (human T cell leukemia virus type I) binding protein 3 protein-coding common_peak1_156_834_0.631843247044234_10.0215540108835_22.0646855052136 chr5 145166225 145167941 + 22.0646855052136 NA promoter-TSS (NM_178576) promoter-TSS (NM_178576) 21 NM_133735 71799 Mm.277413 NM_133735 ENSMUSG00000029624 Ptcd1 1110069M14Rik pentatricopeptide repeat domain 1 protein-coding common_peak2_162_1927_-0.509044892308591_10.6583668900757_22.059476130595 chr13 21831278 21835096 + 22.059476130595 NA promoter-TSS (NM_001110555) promoter-TSS (NM_001110555) 288 NM_178185 319171 Mm.250564 NM_178185 ENSMUSG00000094777 Hist1h2ap ENSMUSG00000060262|Gm11276|OTTMUSG00000000448 histone cluster 1, H2ap protein-coding common_peak1_36_482_-1.13609572762436_8.34783151502359_22.0570964486664 chr17 6746177 6746780 + 22.0570964486664 NA intron (NM_009510, intron 7 of 12) intron (NM_009510, intron 7 of 12) 36302 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_441_3695_0.317404445819303_12.0104512643257_22.0548627274324 chr17 83983868 83989832 + 22.0548627274324 NA Intergenic Intergenic -11702 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak1_146_1734_-0.539709194401656_10.4908653502648_22.0510510489088 chr10 80576761 80578539 + 22.0510510489088 NA promoter-TSS (NM_078477) promoter-TSS (NM_078477) -354 NM_078477 118445 Mm.41513 NM_078477 ENSMUSG00000035397 Klf16 AI843742|BTEB4|DRRF Kruppel-like factor 16 protein-coding common_peak1_200_1209_0.533886884141049_10.5077347742325_22.0468670274443 chr7 89247133 89249141 + 22.0468670274443 NA intron (NM_028343, intron 4 of 14) intron (NM_028343, intron 4 of 14) 90650 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding unique_peak1_37_62_1.84969659108333_6.90212821904158_22.0453765176428 chr9 57552187 57552913 + 22.0453765176428 NA intron (NM_025837, intron 1 of 7) CpG 202 NM_025837 110119 Mm.247218 NM_025837 ENSMUSG00000032306 Mpi 1110002E17Rik|AI315153|Mpi-1|Mpi1 mannose phosphate isomerase protein-coding common_peak2_44_91_1.60261668150762_7.32487029681082_22.0438299011021 chr4 3874722 3875323 + 22.0438299011021 NA Intergenic CpG -2917 NM_020021 17451 Mm.459300 NM_020021 ENSMUSG00000078365 Mos c-mos Moloney sarcoma oncogene protein-coding common_peak1_17_279_-1.6245976550723_7.31698418940882_22.0438299011021 chr9 41072255 41072803 + 22.0438299011021 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) -67901 NM_019465 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak1_108_1285_-0.636932691798311_10.0102085814288_22.0404102143783 chr9 41082889 41083692 + 22.0404102143783 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) 74204 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak1_135_1602_-0.563185515621306_10.3649659523439_22.0370183897377 chr5 105641565 105643935 + 22.0370183897377 NA Intergenic Intergenic -57219 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_43_87_1.62697843524301_7.2729208362588_22.0328082745386 chr4 123233393 123234169 + 22.0328082745386 NA 5' UTR (NM_013905, exon 1 of 5) 5' UTR (NM_013905, exon 1 of 5) 225 NM_013905 56198 Mm.103615 NM_013905 ENSMUSG00000032744 Heyl Hey3|Hrt3|bHLHb33|hesr3 hairy/enhancer-of-split related with YRPW motif-like protein-coding common_peak2_204_2445_-0.44665983658364_11.0328787702356_22.0244937978117 chr4 21847189 21848971 + 22.0244937978117 NA non-coding (NR_028384, exon 1 of 1) non-coding (NR_028384, exon 1 of 1) 368 NR_028384 67735 Mm.391650 NR_028384 4930528A17Rik - RIKEN cDNA 4930528A17 gene ncRNA common_peak1_500_4384_0.292519994509146_12.2446211245867_22.0232772333774 chr5 43232558 43235534 + 22.0232772333774 NA exon (NM_001177379, exon 1 of 11) exon (NM_001177379, exon 1 of 11) 583 NM_001177379 231207 Mm.7233 NM_175937 ENSMUSG00000039782 Cpeb2 A630055H10Rik|Cpe-bp2 cytoplasmic polyadenylation element binding protein 2 protein-coding common_peak1_67_208_1.149401751266_8.28206000771388_22.0225522394079 chr18 50052728 50054035 + 22.0225522394079 NA promoter-TSS (NM_134131) promoter-TSS (NM_134131) 99 NM_134131 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding common_peak1_50_633_-0.960668253011951_8.82800490363343_22.0222376238893 chr6 57823161 57823890 + 22.0222376238893 NA intron (NM_146168, intron 1 of 4) intron (NM_146168, intron 1 of 4) 1600 NM_146168 232023 Mm.24642 NM_146168 ENSMUSG00000037788 Vopp1 AW146242|Ecop vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding common_peak1_66_808_-0.829452192280254_9.24526979628985_22.0130477527413 chr19 4096822 4097902 + 22.0130477527413 NA promoter-TSS (NM_026373) promoter-TSS (NM_026373) 11 NM_026373 52004 Mm.29609 NM_026373 ENSMUSG00000024856 Cdk2ap2 5830466O21Rik|D19Ertd144e|Doc-1r CDK2-associated protein 2 protein-coding common_peak1_249_1662_0.461160636913792_10.9301527717442_21.9990423474166 chr3 5575395 5576979 + 21.9990423474166 NA promoter-TSS (NM_001163306) promoter-TSS (NM_001163306) 61 NM_001163301 19302 Mm.132336 NM_008994 ENSMUSG00000040374 Pex2 D3Ertd138e|PAF-1|PMP35|Pxmp3 peroxisomal biogenesis factor 2 protein-coding common_peak2_166_917_0.604396262274152_10.1445484745509_21.9978961062698 chr19 29045890 29048613 + 21.9978961062698 NA promoter-TSS (NR_028360) promoter-TSS (NR_028360) -232 NR_028360 67329 Mm.394933 NR_028360 1700018L02Rik - RIKEN cDNA 1700018L02 gene ncRNA common_peak1_18_289_-1.57954488661804_7.39013664670591_21.9922434991313 chrX 37085195 37085574 + 21.9922434991313 NA promoter-TSS (NM_026055) promoter-TSS (NM_026055) -162 NM_026055 67248 Mm.30478 NM_026055 ENSMUSG00000079641 Rpl39 2810465O16Rik ribosomal protein L39 protein-coding common_peak1_86_1032_-0.719826708199207_9.65271118476546_21.9888340931651 chr12 59012155 59013393 + 21.9888340931651 NA promoter-TSS (NM_009147) promoter-TSS (NM_009147) -617 NM_025656 66603 Mm.35353 NM_025656 ENSMUSG00000060121 Gemin2 Sip1|gemin-2 gem (nuclear organelle) associated protein 2 protein-coding common_peak1_262_1788_0.445503347223553_11.0276893456637_21.9729174264291 chr7 123369128 123371067 + 21.9729174264291 NA promoter-TSS (NM_001122643) promoter-TSS (NM_001122643) -182 NM_001316713 70497 Mm.403318 NM_144529 ENSMUSG00000030766 Arhgap17 5730403H17Rik|Nadrin|Nadrin2|Rich1|Wbp15 Rho GTPase activating protein 17 protein-coding common_peak1_84_1010_-0.729925434050523_9.61660456487775_21.9710862892883 chr6 67375267 67376234 + 21.9710862892883 NA intron (NM_008354, intron 1 of 15) intron (NM_008354, intron 1 of 15) 387 NM_008354 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak1_47_599_-0.98843091121743_8.73460323488717_21.9627828010323 chr17 25221283 25222239 + 21.9627828010323 NA promoter-TSS (NM_028789) promoter-TSS (NM_028789) -821 NM_028789 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding common_peak2_127_1506_-0.581373504913588_10.266776949141_21.9607697418097 chr1 95654721 95658419 + 21.9607697418097 NA intron (NM_001159745, intron 2 of 3) intron (NM_001159745, intron 2 of 3) 11024 NM_009183 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak1_912_9767_0.199039797308796_13.3533673836418_21.9595999393784 chr15 78509552 78519153 + 21.9595999393784 NA Intergenic Intergenic 15299 NM_001204153 72709 Mm.34776 NM_028331 ENSMUSG00000022440 C1qtnf6 2810036M19Rik|CTRP6 C1q and tumor necrosis factor related protein 6 protein-coding common_peak1_168_1998_-0.497248908215218_10.716438302637_21.95113247102 chr3 152911710 152913617 + 21.95113247102 NA intron (NM_012028, intron 2 of 4) intron (NM_012028, intron 2 of 4) 69544 NM_012028 26938 Mm.40915 NM_012028 ENSMUSG00000039037 St6galnac5 AI851940|Siat7e ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding common_peak1_85_1020_-0.723427669437497_9.63405331615905_21.945051714142 chr7 47007577 47008432 + 21.945051714142 NA intron (NM_175318, intron 1 of 5) CpG 410 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding common_peak1_261_1779_0.446038047179469_11.0206805494435_21.9420983081957 chr18 35829618 35832932 + 21.9420983081957 NA intron (NM_133687, intron 1 of 2) CpG 1457 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_87_1043_-0.714883631503222_9.67046418081827_21.9395331409671 chrX 7647896 7649993 + 21.9395331409671 NA intron (NM_009305, intron 6 of 6) intron (NM_009305, intron 6 of 6) -8435 NM_001290624 54630 Mm.232232 NM_175097 ENSMUSG00000031145 Prickle3 Lmo6|Sfc16 prickle planar cell polarity protein 3 protein-coding common_peak2_87_1043_-0.714883631503222_9.67046418081827_21.9395331409671-2 chrX 136740505 136743068 + 21.9395331409671 NA promoter-TSS (NM_001168229) promoter-TSS (NM_001168229) -177 NM_019768 56397 Mm.27218 NM_019768 ENSMUSG00000031422 Morf4l2 2410017O14Rik|Mrgx|Sid393p|mKIAA0026 mortality factor 4 like 2 protein-coding common_peak1_60_170_1.24666693616107_8.04118598296644_21.9288433129944 chr6 83571647 83572623 + 21.9288433129944 NA intron (NM_024239, intron 1 of 9) intron (NM_024239, intron 1 of 9) 369 NM_024239 70527 Mm.32801 NM_024239 ENSMUSG00000006906 Stambp 5330424L14Rik|5730422L11Rik|AW107289|Amsh|mKIAA4198 STAM binding protein protein-coding unique_peak1_30_37_2.21875469129072_6.35730485908895_21.9276335075477 chr15 6578499 6579133 + 21.9276335075477 NA Intergenic ID_B1|SINE|B4 -1031 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_108_470_0.812158985916852_9.28566274257121_21.9168350205388 chr3 30855736 30856764 + 21.9168350205388 NA 5' UTR (NM_001286994, exon 1 of 4) intron (NM_001134386, intron 1 of 2) 300 NM_001286994 71862 Mm.272019 NM_027965 ENSMUSG00000037661 Gpr160 1700025D19Rik|GPCR150 G protein-coupled receptor 160 protein-coding common_peak1_100_1191_-0.662320326856705_9.88800835703381_21.9153359841021 chr16 87495955 87497458 + 21.9153359841021 NA promoter-TSS (NM_009840) promoter-TSS (NM_009840) 633 NR_040375 414095 Mm.166361 NR_040375 ENSMUSG00000093606 B130034C11Rik - RIKEN cDNA B130034C11 gene ncRNA common_peak2_148_1755_-0.533152127427737_10.5115010658215_21.9147104552018 chr19 6397864 6402126 + 21.9147104552018 NA promoter-TSS (NM_011242) promoter-TSS (NM_011242) -588 NM_011242 19395 Mm.77017 NM_011242 ENSMUSG00000032946 Rasgrp2 CDC25L|Caldaggef1 RAS, guanyl releasing protein 2 protein-coding common_peak2_253_3066_-0.39378944590662_11.3857177283137_21.9143049160384 chrX 167086736 167093427 + 21.9143049160384 NA Intergenic Intergenic -19711 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak2_194_2318_-0.458238068159824_10.9501680705661_21.9047642232281 chr17 35134347 35136530 + 21.9047642232281 NA promoter-TSS (NM_001252469) promoter-TSS (NM_001252469) 260 NM_057171 224727 Mm.203962 NM_057171 ENSMUSG00000024392 Bag6 2410045D21Rik|AA408914|BAG-6|Bat3|D17H6S52E|G3|Scythe BCL2-associated athanogene 6 protein-coding common_peak2_50_632_-0.958390912300885_8.8268662332779_21.9017392411282 chr4 107889153 107890848 + 21.9017392411282 NA 5' UTR (NM_028754, exon 1 of 7) 5' UTR (NM_028754, exon 1 of 7) 101 NM_028754 74098 Mm.274853 NM_028754 ENSMUSG00000028608 0610037L13Rik 1110008H16Rik RIKEN cDNA 0610037L13 gene protein-coding common_peak2_226_1447_0.490098859904526_10.7448953170355_21.8985338040216 chr1 163929403 163930986 + 21.8985338040216 NA intron (NM_001286003, intron 1 of 13) CpG 429 NM_028776 240880 Mm.389213 NM_028776 ENSMUSG00000026584 Scyl3 1200016D23Rik|6030457O16|AW214499|Pace1 SCY1-like 3 (S. cerevisiae) protein-coding common_peak2_255_3092_-0.392088610218673_11.3987468129799_21.8952144905618 chr2 167994554 167998828 + 21.8952144905618 NA intron (NM_001080708, intron 4 of 21) intron (NM_001080708, intron 4 of 21) 13902 NM_001080708 69553 Mm.68454 NM_001080708 ENSMUSG00000074577 Fam65c 2310033K02Rik|Gm124 family with sequence similarity 65, member C protein-coding common_peak1_111_1318_-0.625439476860906_10.0525091108211_21.8879640916153-2 chr7 141447023 141448237 + 21.8879640916153 NA promoter-TSS (NM_026020) promoter-TSS (NM_026020) -20 NM_026020 67186 Mm.380435 NM_026020 ENSMUSG00000025508 Rplp2 2700049I22Rik ribosomal protein, large P2 protein-coding common_peak1_111_1318_-0.625439476860906_10.0525091108211_21.8879640916153 chr19 6117463 6119129 + 21.8879640916153 NA exon (NM_133678, exon 1 of 2) exon (NM_133678, exon 1 of 2) 290 NM_133678 66406 Mm.303924 NM_133678 ENSMUSG00000024790 Sac3d1 2410004C24Rik|AU015683|shd1 SAC3 domain containing 1 protein-coding unique_peak2_8_181_-2.22972158951238_6.3929338454425_21.8859809862104 chr5 115126049 115127349 + 21.8859809862104 NA intron (NM_175352, intron 4 of 4) intron (NM_175352, intron 4 of 4) -7353 NM_007383 11409 Mm.18759 NM_007383 ENSMUSG00000029545 Acads AI196007|Bcd-1|Bcd1|Hdlq8|SCAD acyl-Coenzyme A dehydrogenase, short chain protein-coding common_peak2_130_631_0.713306513669771_9.66043400501199_21.8826201412305 chr2 25127464 25130125 + 21.8826201412305 NA Intergenic Intergenic -33589 NM_172204 241275 Mm.218774 NM_172204 ENSMUSG00000036805 Noxa1 NY-CO-31|SDCCAG31 NADPH oxidase activator 1 protein-coding common_peak2_192_2293_-0.460844383569565_10.933227484231_21.8800189690334 chr12 59011038 59014055 + 21.8800189690334 NA promoter-TSS (NM_009147) promoter-TSS (NM_009147) -529 NM_009147 20334 Mm.491137 NM_009147 ENSMUSG00000020986 Sec23a Msec23|Sec23r SEC23 homolog A, COPII coat complex component protein-coding common_peak1_27_384_-1.30214988556434_7.93763969280009_21.8752248502387 chr6 129824272 129824911 + 21.8752248502387 NA Intergenic ORR1D1|LTR|ERVL-MaLR -48742 NM_001014997 232415 Mm.290598 NM_001014997 ENSMUSG00000071158 Gm156 Klrh1 predicted gene 156 protein-coding common_peak1_65_796_-0.834503655143235_9.22118408641886_21.8679664635882 chr11 83530632 83531398 + 21.8679664635882 NA promoter-TSS (NM_013653) promoter-TSS (NM_013653) -497 NM_013653 20304 Mm.284248 NM_013653 ENSMUSG00000035042 Ccl5 MuRantes|RANTES|SISd|Scya5|TCP228 chemokine (C-C motif) ligand 5 protein-coding common_peak1_60_741_-0.87075592557383_9.09989741383389_21.8600564345187 chr1 40502393 40503463 + 21.8600564345187 NA Intergenic Intergenic -12434 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_91_1088_-0.697102812250684_9.74023683259156_21.8559166575689 chr9 46149797 46151757 + 21.8559166575689 NA intron (NM_027498, intron 3 of 24) intron (NM_027498, intron 3 of 24) -77853 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding common_peak1_34_51_1.98100599638244_6.69094271633231_21.8508982632341 chr5 148768414 148769112 + 21.8508982632341 NA Intergenic Intergenic -9200 NR_131106 78015 Mm.243839 NR_131106 ENSMUSG00000085740 4930505K14Rik - RIKEN cDNA 4930505K14 gene ncRNA common_peak1_55_144_1.33326797118935_7.84654307560961_21.8470409675496 chr5 67394435 67395225 + 21.8470409675496 NA 3' UTR (NM_001164806, exon 5 of 5) 3' UTR (NM_001164806, exon 5 of 5) 32969 NM_001164806 666938 Mm.101339 NM_001164806 ENSMUSG00000092060 Bend4 D330027G24Rik|EG666938 BEN domain containing 4 protein-coding common_peak1_48_110_1.48246037056058_7.5356460516304_21.8442466634473 chr5 107164712 107165640 + 21.8442466634473 NA intron (NM_011578, intron 4 of 16) intron (NM_011578, intron 4 of 16) 124419 NM_011578 21814 Mm.200775 NM_011578 ENSMUSG00000029287 Tgfbr3 1110036H20Rik|AU015626|AW215636|TBRIII transforming growth factor, beta receptor III protein-coding common_peak2_47_598_-0.986024413510334_8.73339998603362_21.8391723959837 chrX 152341524 152343439 + 21.8391723959837 NA promoter-TSS (NM_029836) promoter-TSS (NM_029836) 3 NM_029836 52808 Mm.9997 NM_029836 ENSMUSG00000041096 Tspyl2 CDA1|CINAP|DENTT|DXBwg1396e|DXHXS1008E|E130307F10Rik TSPY-like 2 protein-coding common_peak2_156_1851_-0.517392748854586_10.5961720088329_21.83565748285 chr9 24501739 24506026 + 21.83565748285 NA promoter-TSS (NM_172920) promoter-TSS (NM_172920) -742 NM_172920 244745 Mm.38526 NM_172920 ENSMUSG00000043067 Dpy19l1 1100001I19Rik|6030402K12|AI225861|AW558481 dpy-19-like 1 (C. elegans) protein-coding common_peak1_52_129_1.39337395241466_7.71905478923578_21.8344505929929 chr2 128367028 128367969 + 21.8344505929929 NA intron (NR_028589, intron 1 of 2) intron (NR_028589, intron 1 of 2) 61853 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA unique_peak1_25_22_2.63185928858392_5.83949160034897_21.8324808205187 chr11 95896668 95897153 + 21.8324808205187 NA intron (NM_008081, intron 1 of 10) intron (NM_008081, intron 1 of 10) 17961 NM_008081 14422 Mm.340702 NM_008081 ENSMUSG00000013418 B4galnt2 AI593864|Dlb-1|Dlb1|Galg2|Galgt2|Ggm3|Igf2bp1 beta-1,4-N-acetyl-galactosaminyl transferase 2 protein-coding common_peak1_30_416_-1.23722136871036_8.08529288908948_21.8244779461619 chr9 59659122 59659751 + 21.8244779461619 NA intron (NM_001253883, intron 1 of 10) intron (NM_001253883, intron 1 of 10) 3068 NM_001253883 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding common_peak2_180_2144_-0.477554616910547_10.8279846239316_21.824202052136 chr11 75586966 75589368 + 21.824202052136 NA promoter-TSS (NM_008850) promoter-TSS (NM_008850) 88 NM_008850 18738 Mm.3128 NM_008850 ENSMUSG00000017781 Pitpna Pitpn|vb|vibrator phosphatidylinositol transfer protein, alpha protein-coding common_peak1_14_246_-1.76632311017333_7.06520567649801_21.8129758534576 chr9 107644319 107644682 + 21.8129758534576 NA Intergenic Intergenic -9158 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak2_167_927_0.599330582229994_10.1576462862426_21.8091987072866 chr4 106315215 106317160 + 21.8091987072866 NA promoter-TSS (NM_183225) promoter-TSS (NM_183225) -26 NM_183225 329908 Mm.234544 NM_183225 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 protein-coding common_peak2_70_226_1.1066110585561_8.37985401656897_21.8091963664008 chr6 127329804 127331028 + 21.8091963664008 NA Intergenic Intergenic -22449 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak1_70_851_-0.80155007437882_9.33393458303643_21.8028821199911 chr1 128102150 128103140 + 21.8028821199911 NA promoter-TSS (NM_027678) promoter-TSS (NM_027678) -174 NM_027678 226409 Mm.425048 NM_027678 ENSMUSG00000036086 Zranb3 4933425L19Rik|AH2|AI316834|C730006D09 zinc finger, RAN-binding domain containing 3 protein-coding unique_peak2_24_352_-1.3775091811348_7.77476978270378_21.7991038250157 chr11 23845745 23847189 + 21.7991038250157 NA Intergenic Intergenic 48803 NM_172555 216578 Mm.470599 NM_172555 ENSMUSG00000020273 Papolg 9630006B20Rik poly(A) polymerase gamma protein-coding common_peak2_166_1972_-0.499428635035599_10.6964609232058_21.7973520708472 chr7 47007200 47009524 + 21.7973520708472 NA promoter-TSS (NM_175318) promoter-TSS (NM_175318) 52 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding common_peak2_96_1144_-0.675793519620898_9.82323512317386_21.7664581226022 chr1 182124273 182125962 + 21.7664581226022 NA intron (NM_012058, intron 1 of 2) CpG 380 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding common_peak1_390_3126_0.341629542762899_11.7813782753065_21.7622573656511 chr1 51475962 51479291 + 21.7622573656511 NA intron (NM_001310549, intron 1 of 5) intron (NM_001310549, intron 1 of 5) 773 NM_028696 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak1_16_267_-1.6625529294836_7.23481272571597_21.7596863951397 chr9 21149594 21149977 + 21.7596863951397 NA exon (NM_016742, exon 1 of 8) exon (NM_016742, exon 1 of 8) 121 NM_016742 12539 Mm.32331 NM_016742 ENSMUSG00000019471 Cdc37 p50|p50Cdc37 cell division cycle 37 protein-coding common_peak1_81_973_-0.739722385830559_9.55791676916706_21.7553380853198 chr1 34439001 34440405 + 21.7553380853198 NA promoter-TSS (NM_027159) promoter-TSS (NM_027159) -31 NM_027159 69668 Mm.379170 NM_027159 ENSMUSG00000042111 Ccdc115 2310061I09Rik|Ccp1 coiled-coil domain containing 115 protein-coding common_peak2_695_6827_0.235387421197183_12.8549410536263_21.7476614414753 chr8 126587871 126596935 + 21.7476614414753 NA intron (NM_001164598, intron 1 of 1) CpG 1033 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_145_749_0.658184552188743_9.87983906147761_21.7411348599378 chr1 165641587 165643290 + 21.7411348599378 NA Intergenic CpG -7897 NM_001083897 68481 Mm.46438 NM_001001880 ENSMUSG00000026566 Mpzl1 1110007A10Rik|PZR myelin protein zero-like 1 protein-coding common_peak2_386_3083_0.343409152645481_11.7622916262378_21.7340847848156 chr10 67547641 67550457 + 21.7340847848156 NA promoter-TSS (NM_001005419) promoter-TSS (NM_001005419) -94 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_335_2533_0.376723079403114_11.4955623488424_21.7313759428702 chr11 54954276 54956922 + 21.7313759428702 NA intron (NM_001271455, intron 1 of 17) intron (NM_001271455, intron 1 of 17) 7341 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak2_33_447_-1.17720634989708_8.21875174710907_21.7265317709427 chr11 26386749 26387746 + 21.7265317709427 NA exon (NM_025923, exon 1 of 14) exon (NM_025923, exon 1 of 14) 163 NR_102382 67030 Mm.18875 NM_025923 ENSMUSG00000004018 Fancl 2010322C19Rik|AW554273|B230118H11Rik|Phf9|Pog|gcd Fanconi anemia, complementation group L protein-coding common_peak2_102_430_0.84000382468764_9.17154597143292_21.7259064067812 chr9 57271685 57274289 + 21.7259064067812 NA Intergenic Intergenic -10388 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding common_peak2_77_268_1.02809339823759_8.58550906167542_21.7224581689687 chr10 59969715 59970872 + 21.7224581689687 NA Intergenic Intergenic -18523 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak1_114_514_0.778137768901249_9.3974975065212_21.7188990192982 chr1 105663879 105664806 + 21.7188990192982 NA promoter-TSS (NM_013784) promoter-TSS (NM_013784) 481 NM_173187 227446 Mm.337339 NM_029349 ENSMUSG00000026319 2310035C23Rik 6430401N10|Kiaa1468|mKIAA1468 RIKEN cDNA 2310035C23 gene protein-coding common_peak1_241_1590_0.467461035490757_10.8694486380764_21.7134332615296 chr17 88111957 88114529 + 21.7134332615296 NA Intergenic Intergenic -12269 NM_001190356 225058 Mm.312053 NM_001190356 Gm4832 EG225058 predicted gene 4832 protein-coding common_peak2_71_232_1.0937238395911_8.41104806444983_21.7058663860574 chr14 20479106 20480247 + 21.7058663860574 NA intron (NM_001110794, intron 1 of 12) intron (NM_001110794, intron 1 of 12) 457 NM_001110794 11750 Mm.280231 NM_009674 ENSMUSG00000021814 Anxa7 AI265384|AI316497|Anx7|synexin annexin A7 protein-coding common_peak1_157_1861_-0.513925955259122_10.6056743799292_21.6981399203493 chr15 66560120 66561900 + 21.6981399203493 NA promoter-TSS (NM_172514) promoter-TSS (NM_172514) 36 NM_172514 213068 Mm.132299 NM_172514 ENSMUSG00000036944 Tmem71 AI661017|E430024D12 transmembrane protein 71 protein-coding common_peak2_200_1213_0.529125510047324_10.5101154612793_21.6966363189604 chr12 12261762 12265078 + 21.6966363189604 NA intron (NM_001146119, intron 1 of 11) intron (NM_001146119, intron 1 of 11) 1281 NM_001146119 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding common_peak1_41_533_-1.0566089767027_8.53239144333621_21.687739558066 chr6 48731961 48732888 + 21.687739558066 NA Intergenic L1M2|LINE|L1 -6623 NM_175860 16205 Mm.252599 NM_008376 ENSMUSG00000090019 Gimap1 IAP38|Imap38|imap GTPase, IMAP family member 1 protein-coding unique_peak1_28_31_2.34866331451257_6.17433165725628_21.6861055747201-2 chr17 47174719 47175320 + 21.6861055747201 NA intron (NM_001097623, intron 3 of 19) intron (NM_001097623, intron 3 of 19) 34077 NM_001097623 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding unique_peak1_28_31_2.34866331451257_6.17433165725628_21.6861055747201 chr15 89307715 89308359 + 21.6861055747201 NA exon (NM_001170561, exon 3 of 41) exon (NM_001170561, exon 3 of 41) -2305 NR_105924 102465981 NR_105924 ENSMUSG00000098442 Mir6959 Gm27807|mmu-mir-6959 microRNA 6959 ncRNA common_peak1_23_340_-1.39985246093208_7.71370169855813_21.672939151667 chr3 60502208 60502690 + 21.672939151667 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 1270 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_34_457_-1.15775807357341_8.26032475131024_21.6661430644894 chr10 80825728 80826388 + 21.6661430644894 NA promoter-TSS (NM_008753) promoter-TSS (NM_008753) -598 NM_001301034 18245 Mm.398119 NM_008753 ENSMUSG00000035242 Oaz1 AZ-1|AZ1|Antizyme|ODC-Az|Oaz ornithine decarboxylase antizyme 1 protein-coding common_peak1_51_641_-0.944395931295015_8.85423152147479_21.6530922985967-2 chr6 108672288 108672918 + 21.6530922985967 NA Intergenic L1MB5|LINE|L1 -11669 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_51_641_-0.944395931295015_8.85423152147479_21.6530922985967 chr17 87025507 87026055 + 21.6530922985967 NA promoter-TSS (NM_008838) promoter-TSS (NM_008838) 220 NM_019936 56724 Mm.109329 NM_019936 ENSMUSG00000024146 Cript 1200020A08Rik|AA589469 cysteine-rich PDZ-binding protein protein-coding common_peak2_90_350_0.917017822415486_8.9138361315123_21.6493323082739 chr7 100536489 100537869 + 21.6493323082739 NA promoter-TSS (NM_183270) promoter-TSS (NM_183270) 79 NM_183270 68185 Mm.228995 NM_183270 ENSMUSG00000044881 Coa4 5330414O08Rik|AI115477|AW047259|Chchd8|E2ig2 cytochrome c oxidase assembly factor 4 protein-coding common_peak1_232_1506_0.478647859276025_10.7967876312358_21.6453660041243 chr12 35046498 35048157 + 21.6453660041243 NA 5' UTR (NM_001014973, exon 1 of 26) 5' UTR (NM_001014973, exon 1 of 26) 138 NM_001014973 217463 Mm.213991 NM_001014973 ENSMUSG00000020590 Snx13 Rgs-px1|mKIAA0713 sorting nexin 13 protein-coding common_peak1_192_1143_0.54293395566787_10.4313383146123_21.6440451332684 chr11 76845790 76847317 + 21.6440451332684 NA exon (NM_007754, exon 1 of 21) exon (NM_007754, exon 1 of 21) 455 NM_007754 12874 Mm.276736 NM_007754 ENSMUSG00000020841 Cpd AA960140|AW322530|D830034L15Rik carboxypeptidase D protein-coding common_peak2_193_2301_-0.456721443582465_10.940311396341_21.6439482736132 chr4 150007931 150010609 + 21.6439482736132 NA promoter-TSS (NM_173371) promoter-TSS (NM_173371) -247 NM_173371 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak1_24_351_-1.37341642650091_7.77272340538684_21.6401231903499 chr19 8840527 8841094 + 21.6401231903499 NA intron (NM_001290823, intron 1 of 10) MIRb|SINE|MIR 307 NM_001290823 14705 Mm.345134 NM_008144 ENSMUSG00000071657 Bscl2 2900097C17Rik|AI046355|Gng3lg Berardinelli-Seip congenital lipodystrophy 2 (seipin) protein-coding common_peak2_154_822_0.630039171191001_9.99976820601713_21.6342668551379 chr2 29251582 29253856 + 21.6342668551379 NA non-coding (NR_029460, exon 1 of 2) non-coding (NR_029460, exon 1 of 2) 274 NR_029460 76220 Mm.330108 NR_029460 ENSMUSG00000079499 6530402F18Rik mKIAA1857 RIKEN cDNA 6530402F18 gene ncRNA common_peak1_76_916_-0.764056382821988_9.45874973218406_21.6266259000358 chr7 3703457 3704917 + 21.6266259000358 NA intron (NM_029767, intron 1 of 4) CpG 146 NM_029767 76846 Mm.13944 NM_029767 ENSMUSG00000006333 Rps9 3010033P07Rik|AL022771|AL022885 ribosomal protein S9 protein-coding unique_peak2_9_190_-2.11290691159133_6.52097537224008_21.6206402934919 chrX 167182113 167183172 + 21.6206402934919 NA Intergenic Intergenic 26576 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_58_161_1.2656764021572_7.97268820396322_21.6081894206465 chr17 87119132 87120089 + 21.6081894206465 NA intron (NM_019654, intron 1 of 2) intron (NM_019654, intron 1 of 2) 11931 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding common_peak1_66_204_1.15106360064428_8.25501189982758_21.5940485546446 chr7 99429101 99430120 + 21.5940485546446 NA intron (NM_201352, intron 4 of 17) intron (NM_201352, intron 4 of 17) -36394 NM_028145 72184 Mm.153585 NM_028145 ENSMUSG00000035298 Klhl35 2810406K13Rik kelch-like 35 protein-coding common_peak1_80_961_-0.743551000777163_9.53811758338146_21.592382273271 chr14 25926916 25927985 + 21.592382273271 NA promoter-TSS (NM_001270499) promoter-TSS (NM_001270499) -200 NM_025311 66039 Mm.33344 NM_025311 ENSMUSG00000072676 Tmem254a 0610008K04Rik|0610010A22Rik|AA960404|D14Ertd449e|Tmem254 transmembrane protein 254a protein-coding common_peak2_212_2538_-0.432750617647205_11.0936693708239_21.5908682328317 chr3 96726549 96729511 + 21.5908682328317 NA promoter-TSS (NM_028925) promoter-TSS (NM_028925) 419 NM_026406 67845 Mm.386792 NM_026406 ENSMUSG00000028098 Rnf115 2610028E05Rik|AU042696|Zfp364 ring finger protein 115 protein-coding common_peak1_55_683_-0.904675453681616_8.96551478804509_21.5880773778185 chr17 72835596 72836329 + 21.5880773778185 NA promoter-TSS (NM_027166) promoter-TSS (NM_027166) -742 NM_027166 383295 Mm.277533 NM_027166 ENSMUSG00000039770 Ypel5 2310076K21Rik|CGI-127 yippee-like 5 (Drosophila) protein-coding common_peak2_66_804_-0.822301272852256_9.24169433657585_21.5864490035583 chr9 78526822 78528808 + 21.5864490035583 NA Intergenic Intergenic -46091 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak1_16_266_-1.65715967071338_7.23211609633086_21.5788846237958 chr10 82048144 82048476 + 21.5788846237958 NA intron (NM_001024626, intron 1 of 2) CpG 183 NM_001024626 408062 Mm.391409 NM_001024626 ENSMUSG00000061371 Zfp873 - zinc finger protein 873 protein-coding unique_peak1_26_25_2.5217678486985_5.96132364249034_21.5779342502541 chr2 59612904 59613498 + 21.5779342502541 NA intron (NM_198294, intron 1 of 26) intron (NM_198294, intron 1 of 26) 1159 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak1_81_971_-0.736756927353998_9.55643403992878_21.5614064442213 chr9 69442556 69443953 + 21.5614064442213 NA Intergenic IMPB_01|Satellite|Satellite -10429 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding common_peak2_179_2127_-0.475879175563845_10.8173428477193_21.5590843566458 chr19 47066927 47069318 + 21.5590843566458 NA exon (NM_177342, exon 1 of 11) exon (NM_177342, exon 1 of 11) 374 NM_177342 226182 Mm.301522 NM_177342 ENSMUSG00000025049 Taf5 6330528C20Rik|AV117817 TATA-box binding protein associated factor 5 protein-coding unique_peak1_21_12_3.15935802455286_5.28011873041752_21.5372950286205-2 chr14 66192616 66193117 + 21.5372950286205 NA intron (NM_172498, intron 2 of 29) intron (NM_172498, intron 2 of 29) 20686 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak1_21_12_3.15935802455286_5.28011873041752_21.5372950286205 chr11 109852216 109852654 + 21.5372950286205 NA Intergenic Intergenic 6557 NR_045909 73257 Mm.250442 NR_045909 ENSMUSG00000087393 1700023C21Rik - RIKEN cDNA 1700023C21 gene ncRNA common_peak2_831_8655_0.208998016745896_13.1839837921998_21.5280828629042 chr2 167356686 167369819 + 21.5280828629042 NA Intergenic MLT-int|LTR|ERVL-MaLR -14074 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak2_269_1863_0.432739320249992_11.0805558047793_21.5250068050696 chr18 35828813 35833120 + 21.5250068050696 NA intron (NM_133687, intron 1 of 2) CpG 1148 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_88_1050_-0.704528585197989_9.68528266136318_21.5190068055188 chr6 48740903 48742623 + 21.5190068055188 NA intron (NM_175860, intron 2 of 2) RSINE1|SINE|B4 2716 NM_008376 16205 Mm.252599 NM_008376 ENSMUSG00000090019 Gimap1 IAP38|Imap38|imap GTPase, IMAP family member 1 protein-coding common_peak1_88_1050_-0.704528585197989_9.68528266136318_21.5190068055188-2 chr7 106529304 106530215 + 21.5190068055188 NA Intergenic Intergenic -88686 NR_003967 209380 Mm.461779 NM_001001318 Gm4759 EG209380 GTPase, very large interferon inducible 1 pseudogene pseudo common_peak2_132_1560_-0.564354509315548_10.3260775673201_21.5186427722362 chr5 107985684 107988389 + 21.5186427722362 NA promoter-TSS (NM_026062) promoter-TSS (NM_026062) 41 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_86_1027_-0.712826718528026_9.64921118992986_21.5165108710156 chr12 59011104 59012090 + 21.5165108710156 NA intron (NM_009147, intron 1 of 19) intron (NM_009147, intron 1 of 19) 420 NM_009147 20334 Mm.491137 NM_009147 ENSMUSG00000020986 Sec23a Msec23|Sec23r SEC23 homolog A, COPII coat complex component protein-coding common_peak1_65_199_1.16007606907251_8.22389422431098_21.515425615279 chr11 48982396 48983690 + 21.515425615279 NA Intergenic Intergenic -3645 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5|OTTMUSG00000005540 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak2_233_1517_0.475734201532035_10.8058231761815_21.5147548386462 chr7 31031547 31035923 + 21.5147548386462 NA intron (NM_001287213, intron 8 of 8) intron (NM_001287213, intron 8 of 8) 6582 NR_106017 102465635 NR_106017 ENSMUSG00000098783 Mir7050 Gm27578|mmu-mir-7050 microRNA 7050 ncRNA common_peak1_36_478_-1.12409819452477_8.3418327484738_21.5084063396348 chr7 139970990 139971619 + 21.5084063396348 NA TTS (NM_001033465) TTS (NM_001033465) 7451 NM_001033465 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding common_peak2_187_2225_-0.463882167543229_10.8882967935703_21.5074330542723 chr1 105979366 105983304 + 21.5074330542723 NA Intergenic Intergenic -9071 NM_001122676 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding common_peak1_228_2739_-0.414492283089716_11.212714036303_21.4985581980871 chr12 102307462 102309690 + 21.4985581980871 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 24935 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_133_657_0.695212237600838_9.70954989253566_21.4933832733618 chr15 99332002 99333856 + 21.4933832733618 NA intron (NM_001310623, intron 4 of 24) intron (NM_001310623, intron 4 of 24) 37520 NM_018786 54614 Mm.358668 NM_018786 ENSMUSG00000023007 Prpf40b 2610317D23Rik|Hypc pre-mRNA processing factor 40B protein-coding common_peak2_124_589_0.729549634765499_9.56934596163195_21.491224346719 chr5 142894642 142896919 + 21.491224346719 NA promoter-TSS (NM_001033312) promoter-TSS (NM_001033312) -542 NM_001033312 231863 Mm.89753 NM_001033312 ENSMUSG00000066640 Fbxl18 AI427077|B130019G13Rik|C330021B20Rik F-box and leucine-rich repeat protein 18 protein-coding common_peak2_51_126_1.39334886905512_7.68535912129973_21.4842340274468 chr6 113343547 113344494 + 21.4842340274468 NA promoter-TSS (NM_133926) promoter-TSS (NM_133926) -98 NM_133926 52163 Mm.277373 NM_133926 ENSMUSG00000030272 Camk1 AI505105|CaMKIalpha|D6Ertd263e calcium/calmodulin-dependent protein kinase I protein-coding common_peak1_110_1302_-0.623703201203439_10.0357697679664_21.4826622280896 chr1 78536995 78538531 + 21.4826622280896 NA intron (NM_026713, intron 6 of 6) intron (NM_026713, intron 6 of 6) 26703 NM_026713 68393 Mm.41325 NM_026713 ENSMUSG00000012187 Mogat1 0610030A14Rik|1110064N14Rik|Dgat2l|Dgat2l1|MGAT1|WI1-2612I11.1|mDC2 monoacylglycerol O-acyltransferase 1 protein-coding common_peak2_202_1233_0.523072744628621_10.5306630514637_21.4803960143823 chr12 31654085 31655718 + 21.4803960143823 NA promoter-TSS (NM_028002) promoter-TSS (NM_028002) 32 NM_001163126 238123 Mm.173068 NM_001163126 ENSMUSG00000035933 Cog5 5430405C01Rik|C87247|D18362|GOLTC1|GTC90 component of oligomeric golgi complex 5 protein-coding common_peak2_69_836_-0.801025786840453_9.30857091913012_21.4759958789975 chr15 76700474 76702388 + 21.4759958789975 NA promoter-TSS (NM_027122) promoter-TSS (NM_027122) -111 NM_027122 69572 Mm.34920 NM_027122 ENSMUSG00000019080 Mfsd3 2310010G13Rik major facilitator superfamily domain containing 3 protein-coding common_peak2_534_4804_0.27675529057298_12.3686983609476_21.4715913408853 chr12 91587014 91591396 + 21.4715913408853 NA intron (NM_175335, intron 1 of 8) intron (NM_175335, intron 1 of 8) 444 NM_031391 83602 Mm.275728 NM_031391 ENSMUSG00000020962 Gtf2a1 6330549H03Rik|AA536742|AA959775|AW060250|TfIIAa/b|Tfiia1 general transcription factor II A, 1 protein-coding common_peak2_186_1092_0.552839988430119_10.370497679887_21.4685418785971 chr11 53838642 53843159 + 21.4685418785971 NA intron (NR_033332, intron 2 of 3) intron (NR_033332, intron 2 of 3) 18356 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA common_peak1_135_673_0.686768413351382_9.73998898785755_21.4639917689445 chr17 80479232 80480865 + 21.4639917689445 NA 5' UTR (NM_009231, exon 1 of 22) 5' UTR (NM_009231, exon 1 of 22) 405 NM_009231 20662 Mm.60975 NM_009231 ENSMUSG00000024241 Sos1 4430401P03Rik|9630010N06|AI449023 son of sevenless homolog 1 (Drosophila) protein-coding common_peak1_53_660_-0.919686583481742_8.90866316976682_21.4591803539658 chr18 12168711 12169445 + 21.4591803539658 NA intron (NM_029623, intron 1 of 19) intron (NM_029623, intron 1 of 19) 348 NM_029623 76482 Mm.196596 NM_029623 ENSMUSG00000024410 3110002H16Rik 2400010D15Rik|Mic-1|Mic1 RIKEN cDNA 3110002H16 gene protein-coding common_peak1_53_660_-0.919686583481742_8.90866316976682_21.4591803539658-2 chr9 78527632 78528892 + 21.4591803539658 NA Intergenic Intergenic -46538 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak1_33_445_-1.17075132775978_8.21552423604042_21.4435741756266 chr10 8055635 8056321 + 21.4435741756266 NA Intergenic Intergenic -99855 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak2_239_1575_0.466441546700397_10.8552725928066_21.4307831923664 chr4 95160184 95162254 + 21.4307831923664 NA Intergenic Intergenic -108997 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding unique_peak2_4_134_-2.83890599179277_5.65736260115445_21.4291918161484 chr19 9283270 9283597 + 21.4291918161484 NA Intergenic Intergenic -147867 NM_025610 66514 Mm.272847 NM_025610 ENSMUSG00000024654 Asrgl1 2410004D18Rik|ALP|ALP1|AU040643|AW060375 asparaginase like 1 protein-coding common_peak2_159_1881_-0.507079751538692_10.6245110369592_21.4283343015102 chr13 23569955 23572564 + 21.4283343015102 NA promoter-TSS (NM_178196) promoter-TSS (NM_178196) -39 NM_178187 319166 Mm.261665 NM_178187 ENSMUSG00000069272 Hist1h2ae 1190022L06 histone cluster 1, H2ae protein-coding common_peak2_42_541_-1.03642187109992_8.56393810580391_21.4276499253241 chr9 120576759 120578314 + 21.4276499253241 NA non-coding (NR_073359, exon 1 of 1) non-coding (NR_073359, exon 1 of 1) 205 NR_073359 76100 Mm.48212 NR_073359 ENSMUSG00000052658 5830454E08Rik - RIKEN cDNA 5830454E08 gene ncRNA common_peak1_142_728_0.662415342255491_9.84098267545468_21.4225062234062 chr16 5254100 5256530 + 21.4225062234062 NA intron (NM_027446, intron 1 of 7) intron (NM_027446, intron 1 of 7) 641 NM_027446 70511 Mm.45780 NM_027446 ENSMUSG00000022544 Eef2kmt 5730409G15Rik|Fam86|Fam86a|eEF2-KMT eukaryotic elongation factor 2 lysine methyltransferase protein-coding common_peak2_189_1119_0.545799084516601_10.4021825592033_21.4193580422784 chr11 107426528 107429740 + 21.4193580422784 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 42586 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_139_1641_-0.546568074881559_10.407954374337_21.4164332940547 chr7 72311901 72316068 + 21.4164332940547 NA Intergenic Intergenic -7389 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak1_16_265_-1.65174617452702_7.22940934823768_21.3984782344298 chrX 48439404 48439796 + 21.3984782344298 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 23532 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak2_225_1444_0.485278031970717_10.7394927933734_21.3967538146432 chr12 59060134 59062247 + 21.3967538146432 NA exon (NM_030057, exon 1 of 6) exon (NM_030057, exon 1 of 6) 282 NM_001306218 78232 Mm.290070 NM_030057 ENSMUSG00000020993 Trappc6b 5830498C14Rik|C79212 trafficking protein particle complex 6B protein-coding common_peak2_94_378_0.882415752104119_9.00726191422315_21.3954690585479 chr18 53903109 53904753 + 21.3954690585479 NA intron (NM_152809, intron 3 of 12) intron (NM_152809, intron 3 of 12) 41818 NM_152809 70425 Mm.368668 NM_152809 ENSMUSG00000073563 Csnk1g3 3300002K07Rik|C330049O21Rik casein kinase 1, gamma 3 protein-coding common_peak1_231_1500_0.476791986450946_10.7901042548462_21.3862321780822 chr7 109751433 109753162 + 21.3862321780822 NA promoter-TSS (NM_020050) promoter-TSS (NM_020050) -34 NM_020050 56786 Mm.240668 NM_020050 ENSMUSG00000031021 Tmem9b 2310004K06Rik|AW539847|D7H11orf15|ICRFP703B1614Q5.3 TMEM9 domain family, member B protein-coding common_peak1_367_2882_0.351554927344026_11.6691325851669_21.3763434616275 chr15 60116633 60120902 + 21.3763434616275 NA Intergenic RMER15|LTR|ERVL -102149 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_62_183_1.19804720389477_8.1225855580044_21.3725794341238 chr7 75793318 75794146 + 21.3725794341238 NA Intergenic RLTR14-int|LTR|ERV1 -54606 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_36_477_-1.12108315676934_8.34032522959608_21.3719472221664 chr15 81584315 81585233 + 21.3719472221664 NA Intergenic Intergenic -1440 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding unique_peak2_39_509_-1.07660689804173_8.456049987838_21.3716338258578 chr19 18590109 18592423 + 21.3716338258578 NA intron (NM_017375, intron 5 of 9) MER20|DNA|hAT-Charlie 40547 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding unique_peak1_18_6_3.79300928133929_4.70385956272725_21.3706511305489 chr12 118351031 118351481 + 21.3706511305489 NA Intergenic Intergenic -49816 NM_001166385 20688 Mm.34699 NM_009239 ENSMUSG00000025323 Sp4 5730497N03Rik|HF-1b|HF1-b trans-acting transcription factor 4 protein-coding common_peak1_104_446_0.821449209493501_9.21485562593007_21.3680238909516 chr19 37174168 37176115 + 21.3680238909516 NA intron (NM_001290827, intron 1 of 10) intron (NM_001290827, intron 1 of 10) 922 NM_001290826 208922 Mm.391176 NM_198300 ENSMUSG00000039652 Cpeb3 4831444O18Rik|CPE-BP3|mKIAA0940 cytoplasmic polyadenylation element binding protein 3 protein-coding common_peak1_40_519_-1.06092454796303_8.49190553904694_21.360145831588 chr5 140648230 140649133 + 21.360145831588 NA intron (NM_001308040, intron 1 of 12) CpG 350 NM_001308040 78339 Mm.28947 NM_175274 ENSMUSG00000036565 Ttyh3 2900029G13Rik|AI414930|TTY3|mTTY3 tweety family member 3 protein-coding common_peak1_55_146_1.31350471636792_7.85642470302032_21.3566902822612 chr8 71295314 71296325 + 21.3566902822612 NA intron (NM_001142323, intron 2 of 38) B1_Mur2|SINE|Alu 23105 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding common_peak1_45_98_1.53571649520026_7.39721486767974_21.3474572460442 chr9 38718304 38719016 + 21.3474572460442 NA intron (NM_001145957, intron 1 of 18) C-rich|Low_complexity|Low_complexity 392 NM_172767 67776 Mm.290950 NM_172767 ENSMUSG00000023186 Vwa5a 5830475I06Rik|AW552491|BCSC-1|E130119J22|Loh11cr2a von Willebrand factor A domain containing 5A protein-coding common_peak1_20_307_-1.4893118968964_7.5221305922467_21.3384799023882 chr19 12011425 12011865 + 21.3384799023882 NA Intergenic tRNA-Arg-AGA|tRNA|tRNA 25095 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding common_peak2_61_747_-0.853599943966975_9.12009448790415_21.3352786252174 chr18 36671479 36674707 + 21.3352786252174 NA intron (NM_146085, intron 11 of 11) intron (NM_146085, intron 11 of 11) -2782 NR_028355 24068 Mm.29058 NM_025291 ENSMUSG00000006050 Sra1 AA959952|Sra|Srap|Straa1|Strra1 steroid receptor RNA activator 1 protein-coding common_peak1_126_1487_-0.576948116933986_10.250684752641_21.3331728402631 chr7 118532488 118533910 + 21.3331728402631 NA exon (NM_009940, exon 1 of 6) exon (NM_009940, exon 1 of 6) 157 NM_001304758 12850 Mm.20634 NM_009940 ENSMUSG00000030652 Coq7 clk-1 demethyl-Q 7 protein-coding common_peak2_48_605_-0.966297746562267_8.76002511019182_21.3273017107751 chr7 64140620 64142212 + 21.3273017107751 NA Intergenic MER2|DNA|TcMar-Tigger -12419 NM_001039104 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak1_24_349_-1.36519591969595_7.76861315198436_21.3232002177002 chr10 120635617 120636045 + 21.3232002177002 NA Intergenic Intergenic -129901 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_24_349_-1.36519591969595_7.76861315198436_21.3232002177002-2 chr4 86612184 86612719 + 21.3232002177002 NA promoter-TSS (NM_173400) promoter-TSS (NM_173400) -429 NM_173400 230376 Mm.74730 NM_173400 ENSMUSG00000038047 Haus6 6230416J20Rik|9830144E06|D4Ertd27e|mKIAA1574 HAUS augmin-like complex, subunit 6 protein-coding common_peak1_71_234_1.08139303768038_8.41721346540519_21.3159901042782 chr11 75533875 75534878 + 21.3159901042782 NA intron (NM_001199284, intron 2 of 13) intron (NM_001199284, intron 2 of 13) 2264 NM_001199283 215113 Mm.11186 NM_173388 ENSMUSG00000038178 Slc43a2 7630402D21Rik|BC042513|Lat4 solute carrier family 43, member 2 protein-coding common_peak1_38_497_-1.08705848246022_8.41647269083797_21.3159901042782 chr13 54590212 54590977 + 21.3159901042782 NA promoter-TSS (NM_178605) promoter-TSS (NM_178605) 363 NM_025933 67044 Mm.29353 NM_025933 ENSMUSG00000025868 Higd2a 2010110M21Rik|AA690237 HIG1 domain family, member 2A protein-coding common_peak1_597_5585_0.256478172074749_12.5758389443173_21.2983636580396 chr17 46856012 46858843 + 21.2983636580396 NA Intergenic CpG -26014 NM_001100452 210982 Mm.37642 NM_001100452 ENSMUSG00000036568 Gltscr1l mKIAA0240 GLTSCR1-like protein-coding common_peak1_51_638_-0.937638565119707_8.85085283838714_21.297489211879 chr15 73512527 73513326 + 21.297489211879 NA intron (NM_001081066, intron 1 of 22) intron (NM_001081066, intron 1 of 22) 366 NM_001081066 105841 Mm.322557 NM_001081066 ENSMUSG00000036661 Dennd3 AI447457|E030003N15Rik DENN/MADD domain containing 3 protein-coding common_peak1_28_391_-1.26604652960264_7.98168657931389_21.2949295935886 chr4 47473723 47474335 + 21.2949295935886 NA promoter-TSS (NM_024171) promoter-TSS (NM_024171) 338 NM_019998 56737 Mm.22218 NM_019998 ENSMUSG00000039740 Alg2 1110018A23Rik|1300013N08Rik|ALPG2|CDGIi|MNCb-5081 asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) protein-coding common_peak1_18_285_-1.5595071333815_7.38011777008764_21.2939270332832 chr2 32165342 32165747 + 21.2939270332832 NA intron (NM_001159634, intron 1 of 31) intron (NM_001159634, intron 1 of 31) 14396 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak1_48_112_1.4566972744955_7.54852759966294_21.2883774877225 chr6 99025442 99026300 + 21.2883774877225 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) 2427 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_48_112_1.4566972744955_7.54852759966294_21.2883774877225 chr18 3507856 3508541 + 21.2883774877225 NA 5' UTR (NM_026505, exon 1 of 3) 5' UTR (NM_026505, exon 1 of 3) 241 NM_026505 68010 Mm.284863 NM_026505 ENSMUSG00000024232 Bambi 2610003H06Rik BMP and activin membrane-bound inhibitor protein-coding common_peak1_104_1230_-0.640034815807638_9.94559763858064_21.2805441446339 chr5 148488973 148490628 + 21.2805441446339 NA Intergenic MLT1C|LTR|ERVL-MaLR 62988 NM_011908 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG ubiquitin-like 3 protein-coding common_peak1_57_702_-0.882105253373609_9.01632825238573_21.2749652220681 chr15 3995993 3996848 + 21.2749652220681 NA promoter-TSS (NM_145930) promoter-TSS (NM_145930) 381 NR_045740 328489 Mm.447020 NR_045740 ENSMUSG00000097662 A630020A06 - uncharacterized A630020A06 ncRNA common_peak1_125_1474_-0.578277767998427_10.2373603551374_21.2708556442897 chr5 124049648 124050794 + 21.2708556442897 NA Intergenic Intergenic -17961 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_109_1287_-0.623013548542346_10.0194101038434_21.2649109808432 chr19 41481558 41483067 + 21.2649109808432 NA Intergenic CpG -67327 NM_172154 212391 Mm.422910 NM_172154 ENSMUSG00000025019 Lcor 3110023F06Rik|A630025C20Rik|Mlr2|mKIAA1795 ligand dependent nuclear receptor corepressor protein-coding common_peak1_149_1758_-0.523777747995936_10.518650893474_21.264128229065 chr7 142393341 142395654 + 21.264128229065 NA Intergenic Intergenic -6627 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak2_103_440_0.824011021456123_9.19664035628558_21.2584641367778 chr17 30196961 30198288 + 21.2584641367778 NA intron (NM_148926, intron 4 of 4) intron (NM_148926, intron 4 of 4) 58911 NR_105839 102465223 NR_105839 ENSMUSG00000098522 Mir6412 Gm27364|mmu-mir-6412 microRNA 6412 ncRNA common_peak1_143_1687_-0.53657689327545_10.4528107420695_21.2528944976022 chr19 44281751 44283048 + 21.2528944976022 NA Intergenic Intergenic -11277 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_60_173_1.22157595519824_8.05373147344785_21.2500545605459 chr14 40955957 40957197 + 21.2500545605459 NA intron (NM_145928, intron 1 of 8) intron (NM_145928, intron 1 of 8) -8368 NM_001316748 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding common_peak1_227_2722_-0.413257925120909_11.2043523044833_21.2496688326586 chr16 10783901 10786464 + 21.2496688326586 NA intron (NM_001271603, intron 1 of 1) CpG 354 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding common_peak2_342_2615_0.367265520678073_11.5367795858371_21.2446647185112 chr5 21053455 21057290 + 21.2446647185112 NA intron (NM_011203, intron 1 of 17) CpG 425 NM_011203 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding unique_peak1_22_15_2.93846080409351_5.46923040204675_21.2395530668039 chr9 116134906 116135347 + 21.2395530668039 NA intron (NM_029575, intron 1 of 6) ID_B1|SINE|B4 40237 NM_029575 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_219_2620_-0.421385997569789_11.1452086395435_21.2291130403959 chr14 79534597 79537523 + 21.2291130403959 NA intron (NM_001286411, intron 1 of 8) intron (NM_001286411, intron 1 of 8) 20386 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak1_104_447_0.818225308619215_9.21646757636721_21.2266811502113 chr1 135283070 135284322 + 21.2266811502113 NA exon (NM_001159624, exon 1 of 10) exon (NM_001159624, exon 1 of 10) 388 NM_145417 215615 Mm.291048 NM_145417 ENSMUSG00000041926 Rnpep - arginyl aminopeptidase (aminopeptidase B) protein-coding common_peak2_61_746_-0.851669916868575_9.11912947435495_21.2258639813197 chr11 83439570 83441175 + 21.2258639813197 NA exon (NM_025492, exon 2 of 3) exon (NM_025492, exon 2 of 3) 2678 NM_025492 66330 Mm.44800 NM_025492 ENSMUSG00000035085 1700020L24Rik - RIKEN cDNA 1700020L24 gene protein-coding common_peak2_395_3192_0.333982248616783_11.8076879618785_21.2255740121199 chr1 133692990 133699890 + 21.2255740121199 NA Intergenic Intergenic -6332 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding common_peak1_111_1310_-0.616662597831118_10.0481206713062_21.2210410173045 chr7 3692538 3693639 + 21.2210410173045 NA promoter-TSS (NM_001164205) promoter-TSS (NM_001164205) 437 NM_029934 77582 Mm.397541 NM_029934 ENSMUSG00000035596 Mboat7 5730589L02Rik|BB1|Leng4|Lpiat|Lpiat1|mBB1 membrane bound O-acyltransferase domain containing 7 protein-coding common_peak1_790_8106_0.214103179705504_13.0920040175851_21.2140136723229 chr19 53422369 53426689 + 21.2140136723229 NA Intergenic Intergenic -33956 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak2_275_1927_0.422930606389544_11.1243546394247_21.2126111985649 chr2 132576339 132578894 + 21.2126111985649 NA intron (NM_001291051, intron 1 of 18) CpG 632 NM_001291050 74182 Mm.211211 NM_027096 ENSMUSG00000027346 Gpcpd1 2310004G06Rik|2310032D16Rik|AU015213|Gde5|Prei4|mKIAA1434 glycerophosphocholine phosphodiesterase 1 protein-coding unique_peak1_31_42_2.09660081960943_6.47456516450681_21.2082513988776 chr5 120777098 120777848 + 21.2082513988776 NA exon (NM_145226, exon 1 of 16) exon (NM_145226, exon 1 of 16) 186 NM_145226 246727 Mm.204887 NM_145226 ENSMUSG00000032661 Oas3 Oasl10 2'-5' oligoadenylate synthetase 3 protein-coding common_peak1_92_366_0.891180468044377_8.9652264868654_21.2025202050652 chr1 165816561 165818100 + 21.2025202050652 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 28649 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_59_168_1.23438930750188_8.01807409003312_21.1953295041882 chr2 177956640 177957343 + 21.1953295041882 NA intron (NM_001190302, intron 1 of 4) RMER17B|LTR|ERVK 297 NM_001282028 665211 Mm.441314 NM_001190302 ENSMUSG00000078862 Gm14326 OTTMUSG00000016327 predicted gene 14326 protein-coding common_peak1_21_316_-1.44854128744546_7.58406838641668_21.1952543562 chr7 64045771 64046374 + 21.1952543562 NA Intergenic Intergenic -107157 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak1_29_401_-1.24239525858123_8.02985406188832_21.1871497664178 chr6 129743051 129743675 + 21.1871497664178 NA Intergenic Intergenic -2879 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak1_64_779_-0.830415793416714_9.19212241704125_21.1867714820407 chr9 56509402 56510299 + 21.1867714820407 NA Intergenic B4A|SINE|B4 91004 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_41_529_-1.04576159446571_8.52696775221771_21.1693486033343 chr14 8173285 8173939 + 21.1693486033343 NA promoter-TSS (NM_024221) promoter-TSS (NM_024221) -620 NM_024221 68263 Mm.301527 NM_024221 ENSMUSG00000021748 Pdhb 2610103L06Rik|AL024199|C81408 pyruvate dehydrogenase (lipoamide) beta protein-coding common_peak1_59_724_-0.866568441118236_9.06855296434318_21.1688842783128 chr13 67813593 67814654 + 21.1688842783128 NA intron (NM_198322, intron 1 of 3) intron (NM_198322, intron 1 of 3) 307 NM_198322 212569 Mm.358842 NM_198322 ENSMUSG00000030446 Zfp273 6820416H06Rik|Rslcan1 zinc finger protein 273 protein-coding unique_peak2_24_348_-1.36106803407327_7.76654920917302_21.1652612928948 chr1 155027748 155029787 + 21.1652612928948 NA Intergenic Intergenic 70869 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_25_359_-1.33643185168874_7.8236371704853_21.1567822093033 chr19 53187405 53188038 + 21.1567822093033 NA intron (NM_013758, intron 1 of 15) intron (NM_013758, intron 1 of 15) 43724 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak1_31_422_-1.20164827880843_8.12368971371574_21.1551308628484 chr7 27490819 27491356 + 21.1551308628484 NA TTS (NM_018820) TTS (NM_018820) 4134 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding common_peak1_28_390_-1.26236148279478_7.97984405590996_21.1453962445273 chr16 78577421 78578075 + 21.1453962445273 NA Intergenic Intergenic -1060 NM_025967 67102 Mm.37332 NM_025967 ENSMUSG00000022864 D16Ertd472e 1700010I10Rik|2310009O17Rik|E330003K22Rik|Eurl DNA segment, Chr 16, ERATO Doi 472, expressed protein-coding common_peak2_133_660_0.688649549828387_9.71283123642189_21.1429057727507 chr16 24908832 24911783 + 21.1429057727507 NA intron (NM_001145952, intron 9 of 11) intron (NM_001145952, intron 9 of 11) -149332 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak1_112_1320_-0.611895253074428_10.0614671247096_21.1282504918678 chr13 55444185 55445218 + 21.1282504918678 NA promoter-TSS (NM_001286066) promoter-TSS (NM_001286066) -371 NM_001286063 26385 Mm.10193 NM_011938 ENSMUSG00000074886 Grk6 Gprk6 G protein-coupled receptor kinase 6 protein-coding common_peak1_61_745_-0.849737304334575_9.11816316808795_21.116657109941 chr17 72996171 72997366 + 21.116657109941 NA Intergenic Intergenic 78463 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_103_441_0.820743307622212_9.19827421320254_21.1165464927504 chr4 132986270 132988031 + 21.1165464927504 NA intron (NM_010208, intron 3 of 12) intron (NM_010208, intron 3 of 12) 13055 NM_010208 14191 Mm.271665 NM_010208 ENSMUSG00000028874 Fgr - FGR proto-oncogene, Src family tyrosine kinase protein-coding common_peak2_53_657_-0.91312389570929_8.9053818258806_21.1101588389306 chr8 106682822 106683983 + 21.1101588389306 NA intron (NM_173037, intron 1 of 17) CpG 334 NM_173037 272538 Mm.87151 NM_173037 ENSMUSG00000041949 Tango6 AW413431|E330010G16|Tmco7 transport and golgi organization 6 protein-coding unique_peak2_19_294_-1.51343691661843_7.44785268593999_21.1064563751147 chr5 124872567 124873857 + 21.1064563751147 NA intron (NM_001081750, intron 2 of 3) intron (NM_001081750, intron 2 of 3) 10507 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak2_19_294_-1.51343691661843_7.44785268593999_21.1064563751147 chr9 107644085 107644912 + 21.1064563751147 NA Intergenic Intergenic -9156 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak1_19_294_-1.51343691661843_7.44785268593999_21.1064563751147 chr2 35679990 35680386 + 21.1064563751147 NA intron (NM_001290641, intron 3 of 15) intron (NM_001290641, intron 3 of 15) -11806 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_52_646_-0.921880136549396_8.87668183371781_21.1060558923477 chr6 71270867 71271458 + 21.1060558923477 NA promoter-TSS (NR_106192) promoter-TSS (NR_106192) -509 NR_106192 102465900 NR_106192 ENSMUSG00000098623 Mir8112 Gm27739|mmu-mir-8112 microRNA 8112 ncRNA common_peak2_52_646_-0.921880136549396_8.87668183371781_21.1060558923477 chr17 44120409 44122491 + 21.1060558923477 NA Intergenic Intergenic -15642 NM_199016 224794 Mm.255971 NM_199016 ENSMUSG00000023961 Enpp4 4933413N07Rik|AA986363|AI195364|E-NPP 4|Gm90|mKIAA0879 ectonucleotide pyrophosphatase/phosphodiesterase 4 protein-coding common_peak2_82_302_0.966331885695396_8.72633992632065_21.1026514687407 chr2 104848227 104850173 + 21.1026514687407 NA 5' UTR (NM_178695, exon 2 of 6) 5' UTR (NM_178695, exon 2 of 6) 650 NM_178695 228413 Mm.259609 NM_178695 ENSMUSG00000027171 Prrg4 9930111I18Rik|TMG4 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) protein-coding common_peak2_137_692_0.672496089295937_9.77295958678518_21.0977722164361 chr2 165033722 165035132 + 21.0977722164361 NA intron (NM_144892, intron 1 of 7) CpG 352 NM_144892 228869 Mm.233080 NM_144892 ENSMUSG00000039804 Ncoa5 CIA nuclear receptor coactivator 5 protein-coding common_peak1_64_778_-0.828564997728773_9.19119701919728_21.0799518570096 chr7 145110538 145111925 + 21.0799518570096 NA Intergenic Intergenic 96888 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak2_47_108_1.47220345450153_7.50428605202769_21.0538093284546 chr7 38186592 38187605 + 21.0538093284546 NA intron (NM_028166, intron 1 of 3) intron (NM_028166, intron 1 of 3) 3311 NM_028166 72244 Mm.187554 NM_028166 1600014C10Rik AI428873 RIKEN cDNA 1600014C10 gene protein-coding common_peak2_78_932_-0.743634179738443_9.49391618098254_21.0314626120186 chr19 17294376 17297016 + 21.0314626120186 NA Intergenic Intergenic 43809 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_56_689_-0.885953832115359_8.98747563560785_21.0310867661385 chr6 57535632 57536341 + 21.0310867661385 NA promoter-TSS (NM_175523) promoter-TSS (NM_175523) -560 NM_175523 243382 Mm.396893 NM_175523 ENSMUSG00000037826 Ppm1k 2900063A19Rik|A930026L03Rik|PP2Cm protein phosphatase 1K (PP2C domain containing) protein-coding common_peak2_265_3205_-0.376046086305831_11.4585356670016_21.030289660098 chr9 56462277 56467138 + 21.030289660098 NA intron (NM_025812, intron 1 of 9) intron (NM_025812, intron 1 of 9) 45861 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_21_315_-1.44398300548315_7.58178924543553_21.0302058816113 chr5 123058088 123058584 + 21.0302058816113 NA Intergenic Intergenic -11516 NM_029112 74890 Mm.141383 NM_029112 ENSMUSG00000029477 Morn3 4930438O03Rik MORN repeat containing 3 protein-coding unique_peak2_21_315_-1.44398300548315_7.58178924543553_21.0302058816113 chr9 25196106 25197620 + 21.0302058816113 NA Intergenic Intergenic -45082 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding common_peak2_187_1106_0.543916203017179_10.3843976082901_21.0246676991192 chr18 80150107 80152493 + 21.0246676991192 NA intron (NM_175028, intron 1 of 3) CpG 182 NM_175028 240442 Mm.26594 NM_175028 ENSMUSG00000053950 Adnp2 8430420L05Rik|BC024969|Kiaa0863|Zfp508|mKIAA0863 ADNP homeobox 2 protein-coding common_peak1_44_559_-1.00310437938034_8.6277308272548_21.0124520717528 chr16 91445820 91446471 + 21.0124520717528 NA Intergenic B2_Mm1t|SINE|B2 -18959 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak1_77_272_1.00679861987437_8.59615645085703_20.9988834411342 chr4 120405101 120406038 + 20.9988834411342 NA intron (NM_001159630, intron 1 of 17) CpG 288 NM_013883 29871 Mm.427014 NM_013883 ENSMUSG00000000085 Scmh1 AI315320|AI851618|Scml1|Scml3 sex comb on midleg homolog 1 protein-coding common_peak2_201_2391_-0.440541169406293_11.003731089495_20.9964164653815 chr1 181859635 181863307 + 20.9964164653815 NA Intergenic Intergenic -19070 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_28_389_-1.25866699923704_7.97799681413109_20.9961911292093 chr12 83631600 83632096 + 20.9961911292093 NA promoter-TSS (NM_027349) promoter-TSS (NM_027349) -386 NM_027349 67039 Mm.46005 NM_027349 ENSMUSG00000010608 Rbm25 2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7 RNA binding motif protein 25 protein-coding common_peak1_46_104_1.4888855697599_7.45868830254607_20.9927748872112 chr6 113343478 113344251 + 20.9927748872112 NA promoter-TSS (NM_133926) promoter-TSS (NM_133926) 58 NM_133926 52163 Mm.277373 NM_133926 ENSMUSG00000030272 Camk1 AI505105|CaMKIalpha|D6Ertd263e calcium/calmodulin-dependent protein kinase I protein-coding common_peak2_245_1638_0.453589953305608_10.9053951157523_20.9903849365893 chr8 117156448 117158969 + 20.9903849365893 NA promoter-TSS (NM_001081151) promoter-TSS (NM_001081151) -427 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding common_peak2_179_1037_0.559812531579462_10.2994969941476_20.9892835118703 chr17 32051888 32055049 + 20.9892835118703 NA intron (NM_001163734, intron 6 of 12) intron (NM_001163734, intron 6 of 12) 5183 NM_001163734 72462 Mm.102761 NM_028244 ENSMUSG00000058392 Rrp1b 2600005C20Rik|D030064A17|Kiaa0179|mKIAA0179 ribosomal RNA processing 1 homolog B (S. cerevisiae) protein-coding common_peak2_88_341_0.915165853878291_8.87543544182504_20.9892267645047 chr18 80698344 80700939 + 20.9892267645047 NA intron (NM_198429, intron 1 of 9) intron (NM_198429, intron 1 of 9) 8532 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_69_224_1.09427683449285_8.36091960846346_20.9863449541943 chr9 44496455 44497902 + 20.9863449541943 NA Intergenic Intergenic -1958 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak2_66_207_1.13010398200863_8.26549170914541_20.9759451047062 chr12 30583958 30584980 + 20.9759451047062 NA promoter-TSS (NM_172049) promoter-TSS (NM_172049) 26 NM_172049 211986 Mm.34035 NM_172049 ENSMUSG00000043061 Tmem18 BC024093 transmembrane protein 18 protein-coding common_peak1_22_326_-1.41468602140457_7.6458038147958_20.9721572674936 chr11 98477749 98478240 + 20.9721572674936 NA intron (NM_011771, intron 6 of 7) B1F|SINE|Alu 31160 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak1_36_474_-1.1120000520069_8.33578367721486_20.9642982251995 chrX 36979919 36980678 + 20.9642982251995 NA intron (NM_001177323, intron 1 of 9) intron (NM_001177323, intron 1 of 9) 9397 NM_001177324 56526 Mm.260036 NM_019942 ENSMUSG00000050379 Sept6 2810035H17Rik|C920001C06Rik|Sep6|mKIAA0128 septin 6 protein-coding common_peak1_220_1403_0.487213955744444_10.6989341981768_20.9616882631335 chrX 169996683 169998192 + 20.9616882631335 NA Intergenic CpG -18520 NR_029457 654820 Mm.34441 NM_001039559 ENSMUSG00000072844 G530011O06Rik - RIKEN cDNA G530011O06 gene ncRNA common_peak1_278_3373_-0.365293021246693_11.5375977476642_20.9584995101731 chr10 81134676 81137282 + 20.9584995101731 NA promoter-TSS (NM_010731) promoter-TSS (NM_010731) -292 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak1_117_1377_-0.59622145647611_10.1302494444662_20.956798927787 chr19 5365812 5367669 + 20.956798927787 NA promoter-TSS (NM_001038231) promoter-TSS (NM_001038231) -73 NM_027236 69860 Mm.299167 NM_027236 ENSMUSG00000024841 Eif1ad 2010003J03Rik|AI131644 eukaryotic translation initiation factor 1A domain containing protein-coding common_peak2_169_952_0.581921755128906_10.1872932814744_20.9553979600325 chr5 110807508 110810174 + 20.9553979600325 NA intron (NM_009469, intron 3 of 27) intron (NM_009469, intron 3 of 27) 1240 NM_009469 22241 Mm.271898 NM_009469 ENSMUSG00000029512 Ulk1 AU041434|Unc51.1|mKIAA0722 unc-51 like kinase 1 protein-coding unique_peak2_2_108_-3.4342457902439_5.05106142965498_20.9502582144815 chr14 60137514 60138483 + 20.9502582144815 NA Intergenic Intergenic -51164 NM_015803 50769 Mm.319599 NM_015803 ENSMUSG00000021983 Atp8a2 AI415030|Atpc1b|agil|wl ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 protein-coding unique_peak1_35_57_1.87331667793145_6.7946393340933_20.9428047988545-2 chr7 143042367 143043010 + 20.9428047988545 NA intron (NR_110355, intron 2 of 4) intron (NR_110355, intron 2 of 4) -10062 NM_133655 12520 Mm.806 NM_133655 ENSMUSG00000037706 Cd81 Tapa-1|Tapa1|Tspan28 CD81 antigen protein-coding unique_peak1_35_57_1.87331667793145_6.7946393340933_20.9428047988545 chr18 12862083 12862920 + 20.9428047988545 NA 5' UTR (NM_001252492, exon 1 of 14) 5' UTR (NM_001252492, exon 1 of 14) 212 NM_001252493 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak1_229_2742_-0.408360204690092_11.2173588045032_20.9425705278947 chr1 161733627 161735723 + 20.9425705278947 NA Intergenic Intergenic 53820 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_610_5757_0.250783928937416_12.6167440380321_20.9400483414305 chr2 72976421 72982226 + 20.9400483414305 NA promoter-TSS (NM_001098425) promoter-TSS (NM_001098425) -42 NM_001098425 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding common_peak1_62_185_1.18245034884375_8.13038398552991_20.9393259414032 chr7 16680677 16681646 + 20.9393259414032 NA Intergenic RMER13B|LTR|ERVK -5456 NM_175315 101434 Mm.102767 NM_175315 ENSMUSG00000078795 Ceacam15 AA407838|C430002N04Rik carcinoembryonic antigen-related cell adhesion molecule 15 protein-coding common_peak2_104_1226_-0.635339302986086_9.94324988216986_20.9393158259653 chr16 3894029 3896681 + 20.9393158259653 NA intron (NM_029090, intron 2 of 6) intron (NM_029090, intron 2 of 6) 10736 NM_001290689 74763 Mm.28403 NM_029090 ENSMUSG00000005982 Naa60 1200013P24Rik|AI315146|Nat15 N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding common_peak1_37_484_-1.09486442249124_8.37440872582887_20.9370954126254 chr1 164306873 164307539 + 20.9370954126254 NA promoter-TSS (NM_138314) promoter-TSS (NM_138314) 278 NM_001160209 66352 Mm.33285 NM_025505 ENSMUSG00000026577 Blzf1 1700030G05Rik|Blzf1l|Golgin-45|Jem-1 basic leucine zipper nuclear factor 1 protein-coding common_peak1_101_1191_-0.644885432148349_9.89672580438799_20.9317264730035 chr8 71610956 71611947 + 20.9317264730035 NA intron (NM_146211, intron 1 of 11) CpG 427 NM_146211 234407 Mm.240885 NM_146211 ENSMUSG00000034807 Colgalt1 2810024B22Rik|Glt25d1 collagen beta(1-O)galactosyltransferase 1 protein-coding common_peak2_222_1422_0.483763927427921_10.7166019102404_20.9294385737979 chr2 167659848 167662953 + 20.9294385737979 NA exon (NM_145538, exon 1 of 6) exon (NM_145538, exon 1 of 6) 144 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding common_peak2_370_2922_0.346043760902528_11.6862559942573_20.924745046287 chr6 129180277 129186289 + 20.924745046287 NA intron (NM_053109, intron 2 of 4) L2a|LINE|L2 2668 NM_053109 93694 Mm.197536 NM_053109 ENSMUSG00000030157 Clec2d Clr-b|Clrb|Ocil C-type lectin domain family 2, member d protein-coding common_peak2_228_1478_0.475061557659105_10.7679371159286_20.9213924022529 chr17 28005620 28009154 + 20.9213924022529 NA intron (NM_001286040, intron 11 of 24) intron (NM_001286040, intron 11 of 24) 73197 NM_013687 21463 Mm.29758 NM_013687 ENSMUSG00000062859 Tcp11 D17Ken1|Tcp-11 t-complex protein 11 protein-coding common_peak1_129_632_0.697465142090911_9.6547942604738_20.9206774366671 chr3 86141470 86142645 + 20.9206774366671 NA intron (NM_016959, intron 1 of 5) intron (NM_016959, intron 1 of 5) 611 NM_016959 20091 Mm.391785 NM_016959 ENSMUSG00000028081 Rps3a1 Rps3a ribosomal protein S3A1 protein-coding common_peak2_56_688_-0.883861453154118_8.98642944612723_20.9180728464983 chr16 14159487 14160234 + 20.9180728464983 NA promoter-TSS (NM_001081154) promoter-TSS (NM_001081154) 234 NR_030252 723916 NR_030252 ENSMUSG00000070074 Mir484 Mirn484|mir-484|mmu-mir-484 microRNA 484 ncRNA common_peak2_155_1826_-0.509092846646915_10.580714495304_20.9174089701996 chr14 75031917 75035556 + 20.9174089701996 NA intron (NM_198642, intron 2 of 13) intron (NM_198642, intron 2 of 13) 17709 NM_198642 271221 Mm.320280 NM_198642 ENSMUSG00000034959 Rubcnl 5031414D18Rik|Gm744|Gm911|Kiaa0226l RUN and cysteine rich domain containing beclin 1 interacting protein like protein-coding common_peak2_529_4756_0.274623353545335_12.3531479867351_20.910518657051 chr13 51752400 51758045 + 20.910518657051 NA intron (NM_001281880, intron 2 of 16) B1F1|SINE|Alu 38525 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_199_1213_0.520299419439771_10.5057024159756_20.9048588105912 chr1 15804942 15806778 + 20.9048588105912 NA exon (NM_009352, exon 1 of 10) exon (NM_009352, exon 1 of 10) 214 NM_001286628 21749 Mm.4306 NM_009352 ENSMUSG00000025925 Terf1 Pin2|Trbf1|Trf1 telomeric repeat binding factor 1 protein-coding common_peak1_152_1790_-0.514744328705222_10.5491774576334_20.9028642032408 chr5 25529830 25530713 + 20.9028642032408 NA non-coding (NR_027388, exon 1 of 1) non-coding (NR_027388, exon 1 of 1) 253 NR_027388 73571 Mm.105263 NR_027388 ENSMUSG00000101856 1700096K18Rik - RIKEN cDNA 1700096K18 gene ncRNA common_peak1_138_1622_-0.54246250375537_10.3932160326703_20.9020486434551 chr17 7927098 7929061 + 20.9020486434551 NA intron (NM_145968, intron 4 of 9) intron (NM_145968, intron 4 of 9) 2079 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding common_peak2_122_579_0.725668691203776_9.54274343561682_20.901252055915 chr18 66457874 66459566 + 20.901252055915 NA 5' UTR (NM_021451, exon 1 of 3) 5' UTR (NM_021451, exon 1 of 3) 116 NM_021451 58801 Mm.271878 NM_021451 ENSMUSG00000024521 Pmaip1 Noxa phorbol-12-myristate-13-acetate-induced protein 1 protein-coding common_peak2_87_335_0.920704942287903_8.85266989392271_20.9000194544512 chr11 117337056 117339393 + 20.9000194544512 NA intron (NM_001113488, intron 1 of 9) (TG)n|Simple_repeat|Simple_repeat 5911 NM_001113488 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_382_3054_0.338653632222327_11.7462834808173_20.894429125536 chr4 135101451 135104247 + 20.894429125536 NA Intergenic Intergenic -17796 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_349_2696_0.359023806352607_11.5766517094119_20.8927725141059 chr11 105180160 105183188 + 20.8927725141059 NA promoter-TSS (NR_027956) promoter-TSS (NR_027956) 147 NM_001294329 24086 Mm.126976 NM_011903 ENSMUSG00000020694 Tlk2 4933403M19Rik|PKU-alpha|PKUalpha|Tlk tousled-like kinase 2 (Arabidopsis) protein-coding unique_peak2_29_399_-1.23519975717702_8.02625631118621_20.8927199629929 chr11 86429098 86431083 + 20.8927199629929 NA intron (NR_030571, intron 1 of 2) intron (NR_030571, intron 1 of 2) 14246 NR_030571 100124487 NR_030571 ENSMUSG00000077049 Mir467c Mirn467c|mir-467c microRNA 467c ncRNA common_peak2_65_202_1.13859634166206_8.23463408801621_20.8911284263417 chr6 90715823 90716948 + 20.8911284263417 NA 5' UTR (NM_001134383, exon 1 of 14) 5' UTR (NM_001134383, exon 1 of 14) 144 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_241_1601_0.457520723413094_10.8744187941153_20.8846613647093 chr12 102646191 102648787 + 20.8846613647093 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 37531 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_500_4409_0.284318181396358_12.2487220311431_20.882106900726 chr10 98913274 98916377 + 20.882106900726 NA promoter-TSS (NM_026482) promoter-TSS (NM_026482) -327 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_343_4235_-0.32292277017932_11.8870254889027_20.8817039827737 chr7 73556265 73558596 + 20.8817039827737 NA intron (NR_037569, intron 1 of 4) intron (NR_037569, intron 1 of 4) 965 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_96_1134_-0.663138218814868_9.81690747277084_20.8767093393911 chr5 31596345 31597718 + 20.8767093393911 NA Intergenic Intergenic -16920 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_79_942_-0.736755110671607_9.51273640533929_20.875090907497 chr2 130273546 130275169 + 20.875090907497 NA promoter-TSS (NM_024193) promoter-TSS (NM_024193) -55 NM_024193 67134 Mm.29363 NM_024193 ENSMUSG00000027405 Nop56 2310044F10Rik|Nol5a NOP56 ribonucleoprotein protein-coding common_peak1_223_1432_0.481578789314847_10.7256122889196_20.874664046241 chr7 99534517 99536296 + 20.874664046241 NA promoter-TSS (NM_178220) promoter-TSS (NM_178220) -80 NM_178220 109689 Mm.260193 NM_177231 ENSMUSG00000018909 Arrb1 1200006I17Rik|AW208571|G430100A01Rik arrestin, beta 1 protein-coding common_peak1_52_644_-0.917413584867504_8.87444855787686_20.8726305006987 chr7 30094589 30095428 + 20.8726305006987 NA promoter-TSS (NM_011981) promoter-TSS (NM_011981) -68 NM_011981 26466 Mm.195092 NM_011981 ENSMUSG00000049421 Zfp260 AI480997|Ozrf1|PEX1|Zfp63|Znf260 zinc finger protein 260 protein-coding common_peak1_128_1504_-0.565686085239832_10.2727047290271_20.8586599651286 chr7 118242500 118243734 + 20.8586599651286 NA promoter-TSS (NR_027879) promoter-TSS (NR_027879) 520 NM_001031814 233789 Mm.309053 NM_177180 ENSMUSG00000030655 Smg1 2610207I05Rik|5430435M13Rik|C130002K18Rik|mKIAA0421 SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) protein-coding common_peak1_255_1736_0.4403204691602_10.9825422732905_20.8397928041424 chr11 70916492 70919147 + 20.8397928041424 NA intron (NM_001291142, intron 8 of 16) ID_B1|SINE|B4 52154 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding common_peak1_40_515_-1.04978399035783_8.48633526024434_20.8389811141704 chr1 53297069 53297623 + 20.8389811141704 NA promoter-TSS (NM_153556) promoter-TSS (NM_153556) 251 NM_145517 227102 Mm.212846 NM_145517 ENSMUSG00000026097 Ormdl1 C730042F17Rik ORM1-like 1 (S. cerevisiae) protein-coding common_peak1_78_930_-0.740538266445478_9.49236822433605_20.8367092227844 chr19 6941635 6942827 + 20.8367092227844 NA promoter-TSS (NM_001285453) promoter-TSS (NM_001285453) 219 NM_001177361 107173 Mm.276555 NM_207220 ENSMUSG00000024958 Gpr137 AI428855 G protein-coupled receptor 137 protein-coding common_peak1_293_2113_0.40186340286764_11.2466913628165_20.83361917958 chr3 65527485 65529917 + 20.83361917958 NA non-coding (NR_027955, exon 2 of 2) non-coding (NR_027955, exon 2 of 2) 254 NM_178892 99929 Mm.246398 NM_178892 ENSMUSG00000034640 Tiparp ARTD14|AW558171|PARP7 TCDD-inducible poly(ADP-ribose) polymerase protein-coding common_peak1_53_138_1.32987880530244_7.78388047537473_20.8254217046203 chr14 73058054 73058900 + 20.8254217046203 NA Intergenic Intergenic -9363 NM_001162412 70086 Mm.158324 NM_133720 ENSMUSG00000033470 Cysltr2 2300001H05Rik|CYSLT2R|Cltr2|Cyslt2 cysteinyl leukotriene receptor 2 protein-coding common_peak1_481_4185_0.291107210185295_12.1769102013484_20.8202008076043 chr4 132038706 132042370 + 20.8202008076043 NA intron (NM_183428, intron 1 of 20) intron (NM_183428, intron 1 of 20) 8540 NM_001128606 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding common_peak2_162_1909_-0.495512479001741_10.6516006834222_20.8187082894634 chr5 149183279 149185721 + 20.8187082894634 NA promoter-TSS (NM_001286825) promoter-TSS (NM_001286825) -60 NM_001115153 231915 Mm.29402 NM_001013378 ENSMUSG00000041264 Uspl1 E430026A01Rik ubiquitin specific peptidase like 1 protein-coding common_peak1_58_710_-0.868179344577591_9.03961607733062_20.8106958828744 chr11 96830143 96830786 + 20.8106958828744 NA promoter-TSS (NM_008686) promoter-TSS (NM_008686) -496 NM_008686 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding unique_peak2_17_272_-1.58807177904719_7.29872125139626_20.804322132102 chr4 148900292 148902046 + 20.804322132102 NA intron (NM_001159344, intron 3 of 20) CpG 96777 NM_027195 69743 Mm.233879 NM_027195 ENSMUSG00000028977 Casz1 2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e castor zinc finger 1 protein-coding common_peak1_215_2563_-0.422136046220078_11.1131125235087_20.8026372845822 chr11 53785560 53787789 + 20.8026372845822 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 16201 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak1_157_1848_-0.503818107104523_10.6006204558519_20.7910601177672 chr7 73558712 73559948 + 20.7910601177672 NA promoter-TSS (NR_037569) promoter-TSS (NR_037569) -935 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_41_526_-1.03757219665236_8.52287305331103_20.7833710302012 chr1 180329335 180330141 + 20.7833710302012 NA promoter-TSS (NM_001081175) promoter-TSS (NM_001081175) -738 NM_001081175 320404 Mm.132535 NM_001081175 ENSMUSG00000038855 Itpkb 1110033J02Rik|E130307H12Rik inositol 1,4,5-trisphosphate 3-kinase B protein-coding unique_peak1_31_43_2.06343395567423_6.49114859647441_20.7825924522257 chr14 25530269 25530929 + 20.7825924522257 NA intron (NM_001310666, intron 2 of 23) intron (NM_001310666, intron 2 of 23) -3840 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_100_1178_-0.646499809374305_9.88009809829261_20.780150185304 chr7 13023557 13025417 + 20.780150185304 NA 5' UTR (NM_011588, exon 1 of 17) 5' UTR (NM_011588, exon 1 of 17) 335 NM_011588 21849 Mm.15701 NM_011588 ENSMUSG00000005566 Trim28 AA408787|KAP-1|KRIP-1|MommeD9|Tif1b|Tif1beta tripartite motif-containing 28 protein-coding common_peak2_162_896_0.594880269002109_10.1064043094203_20.7680326565038 chr9 66896754 66899806 + 20.7680326565038 NA intron (NM_173413, intron 1 of 7) intron (NM_173413, intron 1 of 7) 21425 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak1_53_654_-0.906531218398861_8.90208548722538_20.7632012399821 chr1 180777504 180778396 + 20.7632012399821 NA Intergenic CpG 35655 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a H3.3A H3 histone, family 3A protein-coding common_peak1_287_3487_-0.357049718158835_11.5896594656975_20.7631338411779 chr11 46310174 46312943 + 20.7631338411779 NA intron (NM_001252459, intron 1 of 30) intron (NM_001252459, intron 1 of 30) 800 NM_001252460 76884 Mm.154358 NM_133769 ENSMUSG00000020340 Cyfip2 1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168 cytoplasmic FMR1 interacting protein 2 protein-coding common_peak1_76_267_1.01063235031529_8.57140536561542_20.7564310645306 chr9 63690217 63691706 + 20.7564310645306 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 67033 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_116_536_0.748299687775733_9.44292812187328_20.7535097632347 chr6 127573860 127575961 + 20.7535097632347 NA Intergenic B1_Mus1|SINE|Alu -3065 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak1_72_863_-0.77256847577784_9.36860326427455_20.752251787386 chr5 124954213 124955610 + 20.752251787386 NA Intergenic L1M6|LINE|L1 -48564 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak2_200_1224_0.516112182413073_10.5166221250965_20.7509085237741 chr2 34370992 34373361 + 20.7509085237741 NA promoter-TSS (NM_016768) promoter-TSS (NM_016768) -131 NM_016768 18516 Mm.239941 NM_016768 ENSMUSG00000038718 Pbx3 - pre B cell leukemia homeobox 3 protein-coding common_peak2_528_4748_0.27370954894894_12.3502628153328_20.7451916223391 chr14 121376513 121380663 + 20.7451916223391 NA intron (NM_145465, intron 1 of 10) CpG 642 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_176_2078_-0.472013121663261_10.7856674820267_20.7421620259992 chr12 85962818 85965311 + 20.7421620259992 NA intron (NM_001081423, intron 29 of 33) intron (NM_001081423, intron 29 of 33) 114977 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak2_92_369_0.879435260371277_8.97109909070195_20.7396737447089 chr4 43903327 43904839 + 20.7396737447089 NA intron (NM_016678, intron 6 of 20) B3|SINE|B2 28553 NM_016678 53614 Mm.331573 NM_016678 ENSMUSG00000028476 Reck St15|mRECK reversion-inducing-cysteine-rich protein with kazal motifs protein-coding common_peak1_116_1362_-0.595491881044065_10.1148239062832_20.7382369845517 chr1 54913568 54914825 + 20.7382369845517 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 12191 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_275_1934_0.417702091587733_11.1269688968256_20.7365675226076 chr2 154790154 154792790 + 20.7365675226076 NA 5' UTR (NM_023130, exon 1 of 9) 5' UTR (NM_023130, exon 1 of 9) 362 NM_001139511 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding common_peak1_24_21_2.62658357349909_5.77272340538684_20.7343906144212 chr7 110222561 110223065 + 20.7343906144212 NA intron (NM_009302, intron 1 of 11) B3A|SINE|B2 1110 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding common_peak2_80_292_0.97158522857063_8.68054946870756_20.7322820439372 chr4 62639839 62642221 + 20.7322820439372 NA intron (NM_019492, intron 17 of 19) MIRb|SINE|MIR 21358 NM_134257 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_39_74_1.68892784832125_7.07328261465651_20.731856345423 chr13 93842728 93843625 + 20.731856345423 NA intron (NM_009712, intron 4 of 7) (CTGTG)n|Simple_repeat|Simple_repeat 52399 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak2_39_74_1.68892784832125_7.07328261465651_20.731856345423 chr12 84674991 84675635 + 20.731856345423 NA Intergenic Intergenic 23494 NM_001033334 627191 Mm.152484 NM_001033334 ENSMUSG00000071234 Syndig1l DSPC1|Gm261|Tmem90a synapse differentiation inducing 1 like protein-coding common_peak1_223_2662_-0.41243502963362_11.1726191983938_20.7163240046742 chr7 73540222 73542123 + 20.7163240046742 NA non-coding (NR_037569, exon 5 of 5) non-coding (NR_037569, exon 5 of 5) 574 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak1_23_334_-1.37424181725304_7.70089637671862_20.7113116904408 chr7 127477168 127477655 + 20.7113116904408 NA TTS (NM_145589) TTS (NM_145589) 5797 NM_145589 233895 Mm.44183 NM_145589 ENSMUSG00000030822 Prr14 BC006909 proline rich 14 protein-coding common_peak2_107_1258_-0.62263037850671_9.98674737846566_20.7057730224195 chr10 75281307 75283872 + 20.7057730224195 NA intron (NM_153406, intron 13 of 15) L1_Mur3|LINE|L1 -34288 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_188_2224_-0.453845944636056_10.8926666484231_20.6993911170186 chr17 35134523 35136107 + 20.6993911170186 NA promoter-TSS (NM_001252469) promoter-TSS (NM_001252469) 137 NM_057171 224727 Mm.203962 NM_057171 ENSMUSG00000024392 Bag6 2410045D21Rik|AA408914|BAG-6|Bat3|D17H6S52E|G3|Scythe BCL2-associated athanogene 6 protein-coding common_peak1_28_387_-1.25124952767456_7.97428807834985_20.6987713691836 chr6 3345663 3346089 + 20.6987713691836 NA Intergenic Intergenic 53695 NM_010156 209086 Mm.196013 NM_010156 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like protein-coding common_peak1_153_1799_-0.510447339257615_10.5585575215882_20.6970198227608 chr17 33561773 33563858 + 20.6970198227608 NA intron (NM_053214, intron 1 of 27) MLTR14|LTR|ERV1 7108 NM_053214 17916 Mm.42019 NM_053214 ENSMUSG00000024300 Myo1f C330006B10Rik myosin IF protein-coding common_peak1_25_356_-1.32435901938817_7.81760075433502_20.6920782017663 chr3 103866885 103867380 + 20.6920782017663 NA intron (NR_104070, intron 3 of 22) intron (NR_104070, intron 3 of 22) 6855 NM_008979 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding unique_peak1_36_62_1.80250372771149_6.87853178735566_20.682514756624 chr16 97204729 97205403 + 20.682514756624 NA Intergenic Intergenic -34331 NM_031174 13508 Mm.102437 NM_031174 ENSMUSG00000050272 Dscam 4932410A21Rik Down syndrome cell adhesion molecule protein-coding common_peak1_86_1018_-0.700140505499961_9.64286808341583_20.676449708067 chr15 103153168 103154374 + 20.676449708067 NA 3' UTR (NM_027885, exon 6 of 6) 3' UTR (NM_027885, exon 6 of 6) -6943 NR_045743 432989 Mm.383979 NR_045743 ENSMUSG00000097003 D930007P13Rik - Riken cDNA D930007P13 gene ncRNA common_peak1_55_675_-0.887702375077902_8.95702824874323_20.6744948030279 chr5 138170824 138171975 + 20.6744948030279 NA promoter-TSS (NM_021392) promoter-TSS (NM_021392) 463 NM_008568 17220 Mm.378965 NM_008568 ENSMUSG00000029730 Mcm7 AI747533|Mcmd7|mCDC47 minichromosome maintenance complex component 7 protein-coding common_peak1_181_2138_-0.463763413258642_10.8308390605357_20.6700177432731 chr3 103858521 103860202 + 20.6700177432731 NA promoter-TSS (NM_008979) promoter-TSS (NM_008979) -434 NR_104070 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding common_peak1_27_376_-1.27185596325074_7.92249273164329_20.6620663440326 chr9 61964972 61965619 + 20.6620663440326 NA intron (NM_028748, intron 5 of 7) L3|LINE|CR1 -18496 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding common_peak1_30_408_-1.20927482820744_8.07131961883803_20.6580104877281 chr16 44362193 44362797 + 20.6580104877281 NA intron (NM_144550, intron 4 of 17) intron (NM_144550, intron 4 of 17) 15094 NM_144550 212514 Mm.24035 NM_144550 ENSMUSG00000043065 Spice1 Ccdc52|D16Ertd480e spindle and centriole associated protein 1 protein-coding common_peak2_194_2298_-0.445741714232_10.9439198936022_20.6519759219349 chr5 65536336 65538610 + 20.6519759219349 NA 5' UTR (NM_016786, exon 1 of 7) 5' UTR (NM_016786, exon 1 of 7) 228 NM_016786 53323 Mm.319512 NM_016786 ENSMUSG00000029203 Ube2k AW492011|D5Ertd601e|E2-25k|HIP-2|Hip2|Hypg|Lig ubiquitin-conjugating enzyme E2K protein-coding common_peak1_98_1154_-0.652222672489255_9.84756580005879_20.6512208954125 chr10 75591745 75592959 + 20.6512208954125 NA intron (NM_011820, intron 1 of 11) intron (NM_011820, intron 1 of 11) 2971 NM_011820 23887 Mm.257927 NM_011820 ENSMUSG00000006344 Ggt5 AI551243|GGL|GGT-REL|Ggtla1 gamma-glutamyltransferase 5 protein-coding unique_peak2_6_154_-2.44278427762902_6.05473226645973_20.648702729389 chr3 87266093 87266961 + 20.648702729389 NA Intergenic CT-rich|Low_complexity|Low_complexity -3003 NM_030707 80891 Mm.45173 NM_030707 ENSMUSG00000015852 Fcrls 2810439C17Rik|9330158F12|FcRH2sc|Fcrh2|IFGP2|IgSR|MMAN-g|Msr2|moFcRH2sc Fc receptor-like S, scavenger receptor protein-coding common_peak1_373_2960_0.341661210110827_11.702699380233_20.6416889153626 chr17 28210475 28213762 + 20.6416889153626 NA intron (NM_027185, intron 1 of 10) MIRb|SINE|MIR 4340 NM_027185 23853 Mm.204731 NM_027185 ENSMUSG00000002257 Def6 2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6 differentially expressed in FDCP 6 protein-coding common_peak1_106_465_0.794784274701493_9.26157828200503_20.6196592245026 chr4 109656515 109657781 + 20.6196592245026 NA Intergenic CpG 8224 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) protein-coding unique_peak2_10_197_-1.99617118857201_6.6312710257936_20.6176382401647 chr11 58171498 58172354 + 20.6176382401647 NA intron (NM_175001, intron 2 of 6) CpG 272 NM_175001 216767 Mm.259907 NM_175001 ENSMUSG00000020514 Mrpl22 E030011D16Rik|HSPC158|MRP-L25|Rpml25 mitochondrial ribosomal protein L22 protein-coding common_peak1_47_588_-0.961736044552008_8.72125580155446_20.6165847284636 chr5 69556872 69557592 + 20.6165847284636 NA intron (NM_001310631, intron 1 of 14) CpG 308 NM_001310631 231279 Mm.21105 NM_172711 ENSMUSG00000029208 Guf1 4631409J12|AA407526|EF-4 GUF1 homolog, GTPase protein-coding common_peak1_96_1131_-0.659319879468473_9.81499830309765_20.6126679654098 chr7 13023891 13025363 + 20.6126679654098 NA 5' UTR (NM_011588, exon 1 of 17) 5' UTR (NM_011588, exon 1 of 17) 475 NM_011588 21849 Mm.15701 NM_011588 ENSMUSG00000005566 Trim28 AA408787|KAP-1|KRIP-1|MommeD9|Tif1b|Tif1beta tripartite motif-containing 28 protein-coding common_peak1_18_281_-1.5391871490019_7.36995777789784_20.6018021353308 chr7 24904445 24904793 + 20.6018021353308 NA intron (NM_001130152, intron 1 of 28) intron (NM_001130152, intron 1 of 28) 273 NM_001130152 16801 Mm.3181 NM_008488 ENSMUSG00000040940 Arhgef1 Lbcl2|Lsc Rho guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_83_984_-0.713280648172528_9.58733959025747_20.5979201654343 chr6 125190914 125192904 + 20.5979201654343 NA promoter-TSS (NM_025595) promoter-TSS (NM_025595) -291 NM_025595 66493 Mm.138749 NM_025595 ENSMUSG00000030335 Mrpl51 2610511M02Rik|CDA09|HSPC241|Mrp64 mitochondrial ribosomal protein L51 protein-coding common_peak2_84_318_0.934229234087622_8.78452723080868_20.5953675523519-2 chr8 40307261 40308724 + 20.5953675523519 NA promoter-TSS (NM_030110) promoter-TSS (NM_030110) -59 NM_030110 78506 Mm.169893 NM_030110 ENSMUSG00000039478 Micu3 2900075B16Rik|Efha2 mitochondrial calcium uptake family, member 3 protein-coding common_peak2_84_318_0.934229234087622_8.78452723080868_20.5953675523519 chr7 78912686 78914615 + 20.5953675523519 NA promoter-TSS (NM_001113527) promoter-TSS (NM_001113527) -115 NM_020583 57444 Mm.322843 NM_020583 ENSMUSG00000039236 Isg20 1600023I01Rik|2010107M23Rik|20kDa|DnaQL|HEM45 interferon-stimulated protein protein-coding common_peak2_95_390_0.855975293157455_9.03901244388608_20.5893389741544 chr7 66242317 66244739 + 20.5893389741544 NA Intergenic MT2A|LTR|ERVL 134013 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_60_176_1.19691390096397_8.06606250056499_20.587109573497 chr11 108214353 108215363 + 20.587109573497 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 129030 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_92_370_0.875541344266788_8.9730460487542_20.5869220102203 chr11 115365905 115367939 + 20.5869220102203 NA intron (NM_175454, intron 1 of 18) intron (NM_175454, intron 1 of 18) 797 NM_175454 217310 Mm.205707 NM_175454 ENSMUSG00000034586 Hid1 C630004H02Rik HID1 domain containing protein-coding common_peak1_291_2097_0.400744686181072_11.2351713056678_20.5739157194613 chr11 78982293 78985541 + 20.5739157194613 NA intron (NM_010708, intron 1 of 10) intron (NM_010708, intron 1 of 10) 1007 NM_001159301 16859 Mm.341434 NM_010708 ENSMUSG00000001123 Lgals9 AA407335|AI194909|AI265545|LGALS35|Lgals5|gal-9|galectin-9 lectin, galactose binding, soluble 9 protein-coding common_peak1_170_965_0.572753856867685_10.2022563072696_20.5729593995252 chr12 54794940 54796402 + 20.5729593995252 NA promoter-TSS (NM_026998) promoter-TSS (NM_026998) -9 NM_026998 72183 Mm.28240 NM_026998 ENSMUSG00000005656 Snx6 2010006G21Rik|2610032J07Rik|2810425K19Rik|AU018928|C85963 sorting nexin 6 protein-coding common_peak2_162_898_0.591667138406923_10.1080108747179_20.570540610187 chr8 104640636 104642822 + 20.570540610187 NA promoter-TSS (NM_026753) promoter-TSS (NM_026753) -1 NM_026753 68523 Mm.279 NM_026753 ENSMUSG00000031879 Fam96b 1110019N10Rik family with sequence similarity 96, member B protein-coding common_peak2_203_1253_0.508573766698129_10.5466085161511_20.5653981986187 chr7 89246921 89249335 + 20.5653981986187 NA intron (NM_028343, intron 4 of 14) intron (NM_028343, intron 4 of 14) 90659 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding common_peak2_134_673_0.673708372536057_9.73345896744989_20.5572830439592 chr18 84684114 84686254 + 20.5572830439592 NA intron (NM_023149, intron 1 of 11) intron (NM_023149, intron 1 of 11) 518 NM_023149 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding unique_peak2_23_333_-1.36992882438196_7.69873988028307_20.552297671701 chr10 81191806 81193190 + 20.552297671701 NA exon (NM_007828, exon 8 of 8) exon (NM_007828, exon 8 of 8) -2193 NR_015477 69678 Mm.81562 NR_015477 Atcayos 2310050B05Rik ataxia, cerebellar, Cayman type, opposite strand ncRNA common_peak1_92_1085_-0.673991666916772_9.74781255434598_20.5488766205189 chr5 93151977 93153236 + 20.5488766205189 NA intron (NM_001310669, intron 3 of 10) intron (NM_001310669, intron 3 of 10) 53889 NM_017367 12453 Mm.250419 NM_017367 ENSMUSG00000063015 Ccni - cyclin I protein-coding common_peak2_44_96_1.5262657953775_7.36304573987588_20.5471640568946 chr5 107164891 107165612 + 20.5471640568946 NA intron (NM_011578, intron 4 of 16) intron (NM_011578, intron 4 of 16) 124344 NM_011578 21814 Mm.200775 NM_011578 ENSMUSG00000029287 Tgfbr3 1110036H20Rik|AU015626|AW215636|TBRIII transforming growth factor, beta receptor III protein-coding unique_peak2_0_83_-5.00251340439902_3.89106072057925_20.5375882471927 chr5 20930867 20931512 + 20.5375882471927 NA intron (NM_001080977, intron 1 of 7) L1MC1|LINE|L1 -19800 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak1_120_1406_-0.581839768601085_10.167486728936_20.5354368377807 chr9 66914899 66916786 + 20.5354368377807 NA intron (NM_173413, intron 1 of 7) intron (NM_173413, intron 1 of 7) 3863 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak1_381_3050_0.335917352594494_11.7430251408759_20.5352591678346 chr19 18629666 18632382 + 20.5352591678346 NA promoter-TSS (NM_145497) promoter-TSS (NM_145497) 789 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak2_324_2437_0.373537696591002_11.4382512589157_20.5327648457143 chr1 55129803 55132555 + 20.5327648457143 NA promoter-TSS (NM_025283) promoter-TSS (NM_025283) -66 NM_001310585 19070 Mm.291037 NM_025283 ENSMUSG00000025979 Mob4 2610109B12Rik|Mobkl3|Phocn|Prei3 MOB family member 4, phocein protein-coding unique_peak1_26_27_2.41485264478199_6.0147812444486_20.5236553229558 chr11 33513129 33513689 + 20.5236553229558 NA intron (NR_110973, intron 1 of 28) CpG 337 NR_110973 66011 Mm.383775 NM_023146 ENSMUSG00000040594 Ranbp17 - RAN binding protein 17 protein-coding common_peak1_38_491_-1.06957105573138_8.40772897747355_20.5202453544309 chr6 130162421 130163042 + 20.5202453544309 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -1983 NR_104105 654449 Mm.439698 NM_008461 ENSMUSG00000072721 Klra14-ps EG654449|Gm15858|Klra14|Klra29|Klra31|Ly49N|OTTMUSG00000026959 killer cell lectin-like receptor subfamily A, member 14, pseudogene pseudo unique_peak2_27_375_-1.26802410165971_7.92057680084778_20.5119297401687 chr7 80646836 80648278 + 20.5119297401687 NA intron (NM_173863, intron 2 of 14) intron (NM_173863, intron 2 of 14) 11540 NR_040343 100504375 Mm.322881 NR_040343 ENSMUSG00000084821 Gm15880 OTTMUSG00000027171 predicted gene 15880 ncRNA common_peak2_177_1025_0.556815664343491_10.2812228477788_20.499112728956 chr14 25462623 25467223 + 20.499112728956 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 5738 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_68_816_-0.791596947898888_9.27839379419624_20.495825734666 chrX 48140540 48141868 + 20.495825734666 NA Intergenic (TCTCTG)n|Simple_repeat|Simple_repeat -5232 NM_001313749 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding common_peak2_22_323_-1.40138919879111_7.63915540348907_20.4878044961765 chr9 64960736 64961637 + 20.4878044961765 NA 5' UTR (NM_175153, exon 1 of 13) 5' UTR (NM_175153, exon 1 of 13) 256 NM_175153 69882 Mm.272616 NM_175153 ENSMUSG00000034263 Vwa9 2010321M09Rik von Willebrand factor A domain containing 9 protein-coding common_peak2_789_8114_0.210441609742659_13.0915961843067_20.4868745923076 chr9 45290055 45301654 + 20.4868745923076 NA Intergenic Charlie5|DNA|hAT-Charlie -23246 NM_001013373 214531 Mm.394987 NM_001013373 ENSMUSG00000037129 Tmprss13 BC010843|Tpmrss13 transmembrane protease, serine 13 protein-coding common_peak1_118_1382_-0.586513070910851_10.1403289056951_20.4754057682506 chr4 126201445 126202773 + 20.4754057682506 NA intron (NM_146153, intron 1 of 10) intron (NM_146153, intron 1 of 10) 601 NM_146153 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak2_130_1522_-0.555612964640419_10.2948937441671_20.4739848286039 chr7 118532305 118534089 + 20.4739848286039 NA exon (NM_009940, exon 1 of 6) exon (NM_009940, exon 1 of 6) 159 NM_001304758 12850 Mm.20634 NM_009940 ENSMUSG00000030652 Coq7 clk-1 demethyl-Q 7 protein-coding common_peak1_46_577_-0.971794595074661_8.68902838496335_20.464750257872 chr18 84951686 84952234 + 20.464750257872 NA promoter-TSS (NM_025969) promoter-TSS (NM_025969) -436 NM_025969 67105 Mm.250617 NM_025969 ENSMUSG00000024645 Timm21 1700034H14Rik|2700002I20Rik tranlocase of inner mitochondrial membrane 21 protein-coding unique_peak2_13_228_-1.77925134926537_6.94957811346426_20.4635409000392 chr5 38479682 38480764 + 20.4635409000392 NA promoter-TSS (NM_001102415) promoter-TSS (NM_001102415) 83 NM_001102414 117591 Mm.260137 NM_145559 ENSMUSG00000005107 Slc2a9 Glut9|SLC2A9B|SLC2a9A solute carrier family 2 (facilitated glucose transporter), member 9 protein-coding common_peak2_174_2049_-0.471856892990955_10.7654797478973_20.4630547582536 chr10 80166714 80169100 + 20.4630547582536 NA promoter-TSS (NM_007705) promoter-TSS (NM_007705) 66 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding unique_peak2_12_217_-1.83937539132235_6.84849662911575_20.4597977058133 chr1 52649567 52651080 + 20.4597977058133 NA non-coding (NR_024590, exon 9 of 9) non-coding (NR_024590, exon 9 of 9) 19618 NM_001142647 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding common_peak1_132_1546_-0.551357168786675_10.3195788970557_20.4584728535315 chr11 58322427 58324091 + 20.4584728535315 NA promoter-TSS (NM_001256518) promoter-TSS (NM_001256518) 106 NM_001256517 319475 Mm.72124 NM_178761 ENSMUSG00000049755 Zfp672 4930488P06Rik|4930511N19Rik|Znf672 zinc finger protein 672 protein-coding common_peak1_102_439_0.810188170252079_9.1864537986507_20.4432776439887 chr1 144330474 144331434 + 20.4432776439887 NA Intergenic L1_Mus1|LINE|L1 -81850 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak2_74_882_-0.756119919358799_9.40820966796907_20.4426137086636 chr1 53296464 53297893 + 20.4426137086636 NA promoter-TSS (NM_153556) promoter-TSS (NM_153556) 83 NM_145517 227102 Mm.212846 NM_145517 ENSMUSG00000026097 Ormdl1 C730042F17Rik ORM1-like 1 (S. cerevisiae) protein-coding common_peak1_241_1607_0.452127464642876_10.8771154235004_20.4406232236916 chr6 83455595 83457618 + 20.4406232236916 NA Intergenic CpG 14851 NR_028382 320775 Mm.434334 NR_028382 ENSMUSG00000051844 B230319C09Rik - RIKEN cDNA B230319C09 gene ncRNA common_peak1_31_417_-1.18449355776936_8.1151123531962_20.4397140738819 chr15 81584535 81585060 + 20.4397140738819 NA Intergenic Intergenic -1417 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding common_peak1_31_417_-1.18449355776936_8.1151123531962_20.4397140738819-2 chr3 52270239 52270683 + 20.4397140738819 NA intron (NM_019739, intron 1 of 2) intron (NM_019739, intron 1 of 2) 2124 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak2_389_3140_0.330653120020571_11.7823347876623_20.439514479761 chr2 180273630 180278120 + 20.439514479761 NA Intergenic Intergenic -2410 NM_145851 252966 Mm.386884 NM_145851 ENSMUSG00000038990 Cables2 ik3-2 CDK5 and Abl enzyme substrate 2 protein-coding common_peak2_321_2408_0.374390546306868_11.4214139513919_20.4280178376754 chr2 23038772 23041502 + 20.4280178376754 NA 5' UTR (NM_007380, exon 1 of 10) 5' UTR (NM_007380, exon 1 of 10) 104 NM_001077192 11308 Mm.205647 NM_007380 ENSMUSG00000058835 Abi1 E3B1|NAP1|Ssh3bp1|abi-1 abl-interactor 1 protein-coding common_peak1_37_480_-1.0829165691868_8.36843479917664_20.4033748988118 chr3 146328194 146328932 + 20.4033748988118 NA Intergenic Intergenic 50381 NR_033542 100038607 Mm.365888 NR_033542 ENSMUSG00000105602 Gm10636 ENSMUSG00000074175 predicted gene 10636 ncRNA common_peak1_96_398_0.845093427141064_9.06279164979288_20.3986953267833 chr3 52045965 52047275 + 20.3986953267833 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 58386 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like 3 (Drosophila) protein-coding unique_peak2_15_249_-1.66953102153692_7.13101877389363_20.3984254748022 chr10 75424144 75425343 + 20.3984254748022 NA intron (NM_133995, intron 4 of 9) intron (NM_133995, intron 4 of 9) 17832 NM_133995 103149 Mm.441195 NM_133995 ENSMUSG00000033427 Upb1 AI195023 ureidopropionase, beta protein-coding common_peak2_341_2619_0.359894450465001_11.5352983216573_20.3956902166148 chr6 39204104 39207750 + 20.3956902166148 NA intron (NM_001033430, intron 1 of 19) CpG 846 NM_001033430 338523 Mm.293175 NM_001033430 ENSMUSG00000042599 Kdm7a A630082K20Rik|BB041802|ENSMUSG00000073143|Jhdm1d|mKIAA1718 lysine (K)-specific demethylase 7A protein-coding common_peak1_25_354_-1.31625396975111_7.81354822951649_20.3840207548292 chrX 85776779 85777430 + 20.3840207548292 NA promoter-TSS (NM_008194) promoter-TSS (NM_008194) -285 NM_001294138 14933 Mm.246682 NM_008194 ENSMUSG00000025059 Gk D930012N15Rik|Gyk glycerol kinase protein-coding common_peak1_35_458_-1.11105267035478_8.28682400823642_20.380600723645 chr17 33557560 33558242 + 20.380600723645 NA intron (NM_053214, intron 1 of 27) ID_B1|SINE|B4 2194 NM_053214 17916 Mm.42019 NM_053214 ENSMUSG00000024300 Myo1f C330006B10Rik myosin IF protein-coding common_peak2_204_2418_-0.430646202036177_11.0248719529618_20.3796024046962 chr11 6625411 6629065 + 20.3796024046962 NA Intergenic Intergenic -1171 NM_134011 21379 Mm.247761 NM_134011 ENSMUSG00000000384 Tbrg4 2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12|mKIAA0948 transforming growth factor beta regulated gene 4 protein-coding common_peak1_21_311_-1.4256044761683_7.5725999807781_20.3737432461677 chr8 27023779 27024290 + 20.3737432461677 NA intron (NM_153592, intron 1 of 11) CpG 235 NM_153592 244373 Mm.277699 NM_153592 ENSMUSG00000031483 Erlin2 BC036333|C87251|Spfh2 ER lipid raft associated 2 protein-coding common_peak2_107_1254_-0.618039459625827_9.98445191902522_20.372929955265 chr16 18497387 18499393 + 20.372929955265 NA promoter-TSS (NM_023120) promoter-TSS (NM_023120) -323 NM_001081682 13972 Mm.236139 NM_023120 ENSMUSG00000000884 Gnb1l ESTM55|Gm16314|Me49f07|OTTMUSG00000033458|Wdr14|Wdvcf guanine nucleotide binding protein (G protein), beta polypeptide 1-like protein-coding common_peak1_154_1806_-0.504592999251972_10.5670842912386_20.3553103258478 chr6 51468461 51469953 + 20.3553103258478 NA intron (NM_016806, intron 1 of 10) CpG 687 NM_182650 53379 Mm.155896 NM_016806 ENSMUSG00000004980 Hnrnpa2b1 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding common_peak1_128_629_0.690653668019953_9.64453485239726_20.3495663437732 chr11 97135048 97137581 + 20.3495663437732 NA 3' UTR (NM_198100, exon 9 of 9) 3' UTR (NM_198100, exon 9 of 9) 10105 NR_106094 102466822 NR_106094 ENSMUSG00000099286 Mir7235 Gm27986|mmu-mir-7235 microRNA 7235 ncRNA common_peak2_46_576_-0.969296421219465_8.68777929803575_20.3431883726454 chr12 84407785 84409431 + 20.3431883726454 NA promoter-TSS (NM_028377) promoter-TSS (NM_028377) 421 NM_007647 12499 Mm.10211 NM_007647 ENSMUSG00000021236 Entpd5 AI196558|AI987697|Cd39l4|ER-UDPase|NTPDase-5|NTPDase5|Pcph|mNTPase ectonucleoside triphosphate diphosphohydrolase 5 protein-coding common_peak1_46_576_-0.969296421219465_8.68777929803575_20.3431883726454 chr4 132353857 132354745 + 20.3431883726454 NA promoter-TSS (NR_003270) promoter-TSS (NR_003270) -615 NR_003270 399101 Mm.486919 NR_002904 ENSMUSG00000085241 Snhg3 Rnu17d|U17HG small nucleolar RNA host gene 3 ncRNA common_peak2_302_3676_-0.343330751444554_11.672648085481_20.3412318696828 chr9 124120526 124128464 + 20.3412318696828 NA exon (NM_009917, exon 2 of 2) exon (NM_009917, exon 2 of 2) 2952 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak1_93_1094_-0.66697175587616_9.76322927655045_20.3409526625345 chr15 98992714 98994084 + 20.3409526625345 NA Intergenic CpG 7434 NR_045991 75951 Mm.441657 NR_045991 ENSMUSG00000097587 4930578M01Rik 3010001K12Rik RIKEN cDNA 4930578M01 gene ncRNA common_peak1_40_511_-1.03855673493457_8.48072163253271_20.3222139625647 chr4 121196515 121197285 + 20.3222139625647 NA Intergenic B1_Mur3|SINE|Alu -8366 NM_001081013 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding common_peak1_14_238_-1.7188226865694_7.04145546469605_20.3207622280589 chr7 127393756 127394147 + 20.3207622280589 NA promoter-TSS (NM_198011) promoter-TSS (NM_198011) -330 NM_198011 101604 Mm.334241 NM_198011 ENSMUSG00000078580 E430018J23Rik AI480612 RIKEN cDNA E430018J23 gene protein-coding common_peak1_34_55_1.87409079246593_6.74440031829057_20.3052478344995 chr1 170278116 170278860 + 20.3052478344995 NA intron (NM_012009, intron 1 of 3) RMER10B|LTR|ERVL 1164 NM_012009 26904 Mm.57009 NM_012009 ENSMUSG00000102418 Sh2d1b1 EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b SH2 domain containing 1B1 protein-coding common_peak1_156_1829_-0.500152298765755_10.5875517837885_20.3012205942239 chr13 41380716 41382823 + 20.3012205942239 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -22768 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak2_282_2010_0.406444723137412_11.1769197278741_20.2943576513562 chr12 3307911 3310950 + 20.2943576513562 NA 5' UTR (NM_016676, exon 1 of 6) 5' UTR (NM_016676, exon 1 of 6) 539 NM_016676 19325 Mm.378993 NM_016676 ENSMUSG00000020671 Rab10 AW107754 RAB10, member RAS oncogene family protein-coding common_peak1_163_1913_-0.487707227047887_10.6585215009621_20.2880269830817 chr5 146220502 146222151 + 20.2880269830817 NA promoter-TSS (NM_001256087) promoter-TSS (NM_001256087) 131 NM_028774 74132 Mm.26696 NM_028774 ENSMUSG00000029634 Rnf6 1200013I08Rik|5730419H05Rik|AA537053 ring finger protein (C3H2C3 type) 6 protein-coding common_peak2_89_1048_-0.68200801382628_9.69379495566413_20.287390350564 chr1 45794613 45796157 + 20.287390350564 NA promoter-TSS (NM_028599) promoter-TSS (NM_028599) -116 NM_028599 73674 Mm.270376 NM_028599 ENSMUSG00000025995 Wdr75 1300003A18Rik|2410118I19Rik|C77608 WD repeat domain 75 protein-coding common_peak2_420_3491_0.31317540022258_11.9264255437407_20.282913251889 chr1 30871863 30874792 + 20.282913251889 NA Intergenic CpG -10071 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik|mKIAA0244 PHD finger protein 3 protein-coding unique_peak1_14_1_5.18204412141135_3.59102206070567_20.2766712034996 chr3 9580684 9581030 + 20.2766712034996 NA intron (NM_133218, intron 1 of 8) intron (NM_133218, intron 1 of 8) 29228 NM_133218 170753 Mm.212908 NM_133218 ENSMUSG00000040209 Zfp704 C030026M03|C030034L19Rik|Gig1|Znf704 zinc finger protein 704 protein-coding unique_peak2_19_289_-1.48877486238416_7.43552165882286_20.2583607252006 chr11 119237561 119238994 + 20.2583607252006 NA intron (NM_175430, intron 6 of 18) (TTTG)n|Simple_repeat|Simple_repeat 9705 NM_175430 207607 Mm.189885 NM_175430 ENSMUSG00000039963 Ccdc40 B930008I02Rik coiled-coil domain containing 40 protein-coding common_peak1_19_289_-1.48877486238416_7.43552165882286_20.2583607252006 chr7 45395957 45396342 + 20.2583607252006 NA promoter-TSS (NR_126539) promoter-TSS (NR_126539) -407 NR_126538 20637 Mm.216386 NM_009224 ENSMUSG00000063511 Snrnp70 2700022N21Rik|3200002N22Rik|AI325098|R74807|Rnu1p70|Rnulp70|Snrp70|Srnp70|U1-70|U1-70K small nuclear ribonucleoprotein 70 (U1) protein-coding common_peak1_78_924_-0.731210464290358_9.48770432325849_20.2566570232559 chr5 105495415 105496254 + 20.2566570232559 NA Intergenic Intergenic -23637 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak2_125_607_0.700293957694553_9.59807449229086_20.2559734228181 chr16 84702538 84704207 + 20.2559734228181 NA Intergenic CpG -9651 NR_132106 100653389 Mm.261808 NR_132106 ENSMUSG00000097418 Mir155hg Bic|Gm26667 Mir155 host gene (non-protein coding) ncRNA common_peak2_252_1715_0.437008379721817_10.9633380273605_20.2558617768191 chr9 111117195 111119972 + 20.2558617768191 NA intron (NM_001164838, intron 1 of 14) CpG 472 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding common_peak2_85_1002_-0.697766409171876_9.62122268602624_20.2556339914287 chr1 34438818 34440672 + 20.2556339914287 NA promoter-TSS (NM_027159) promoter-TSS (NM_027159) -73 NM_027159 69668 Mm.379170 NM_027159 ENSMUSG00000042111 Ccdc115 2310061I09Rik|Ccp1 coiled-coil domain containing 115 protein-coding common_peak1_47_585_-0.954369075143797_8.71757231685035_20.2546637900091 chr16 92883849 92884834 + 20.2546637900091 NA Intergenic Intergenic -58267 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_173_2034_-0.4714029373014_10.7551116105029_20.252625428354 chr11 75587449 75589053 + 20.252625428354 NA 5' UTR (NM_008850, exon 1 of 12) 5' UTR (NM_008850, exon 1 of 12) 172 NM_008850 18738 Mm.3128 NM_008850 ENSMUSG00000017781 Pitpna Pitpn|vb|vibrator phosphatidylinositol transfer protein, alpha protein-coding common_peak1_69_824_-0.780192283423288_9.29815416742153_20.2419815399451 chr11 115612365 115613527 + 20.2419815399451 NA promoter-TSS (NM_001243587) promoter-TSS (NM_001243587) 23 NM_001243584 69674 Mm.390387 NM_027162 ENSMUSG00000020743 Mif4gd 1110014L05Rik|2310075G12Rik MIF4G domain containing protein-coding common_peak2_444_3766_0.301923637695115_12.0301621367949_20.2416659156032 chr5 25497102 25500651 + 20.2416659156032 NA promoter-TSS (NR_030700) promoter-TSS (NR_030700) -93 NM_001081383 231051 Mm.332268 NM_001081383 ENSMUSG00000038056 Kmt2c E330008K23Rik|HALR|Mll3|mKIAA1506 lysine (K)-specific methyltransferase 2C protein-coding common_peak1_101_433_0.812731855869334_9.16791716037915_20.2261752813378 chr17 30196985 30198185 + 20.2261752813378 NA intron (NM_148926, intron 4 of 4) intron (NM_148926, intron 4 of 4) 58950 NR_105839 102465223 NR_105839 ENSMUSG00000098522 Mir6412 Gm27364|mmu-mir-6412 microRNA 6412 ncRNA common_peak2_267_1862_0.420356363580797_11.073590140732_20.2240253940664 chr6 31398216 31400876 + 20.2240253940664 NA promoter-TSS (NR_040300) promoter-TSS (NR_040300) 718 NM_013791 27418 Mm.238038 NM_013791 ENSMUSG00000025609 Mkln1 A130067F06Rik|AU015903|BB154892 muskelin 1, intracellular mediator containing kelch motifs protein-coding common_peak2_63_758_-0.818478189917586_9.15871698045667_20.2234271263253 chr4 95214564 95216755 + 20.2234271263253 NA Intergenic IMPB_01|Satellite|Satellite -163437 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak1_46_575_-0.966793914016295_8.68652804443417_20.2218818552251 chr6 47812552 47813479 + 20.2218818552251 NA intron (NM_009787, intron 1 of 9) intron (NM_009787, intron 1 of 9) 497 NM_009787 12304 Mm.2442 NM_009787 ENSMUSG00000025823 Pdia4 AI987846|Cai|ERp-72|Erp72 protein disulfide isomerase associated 4 protein-coding common_peak1_142_739_0.640808886066115_9.85178590354937_20.2184429058382 chr14 49172026 49173442 + 20.2184429058382 NA exon (NM_027492, exon 2 of 5) exon (NM_027492, exon 2 of 5) 488 NM_027492 70646 Mm.275688 NM_027492 ENSMUSG00000036282 Naa30 4930487N19Rik|5730533P17Rik|AI447922|AW322455|Nat12 N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding common_peak1_27_373_-1.26032970986971_7.91672960495278_20.2126788032333 chr8 25624611 25625107 + 20.2126788032333 NA intron (NM_001308482, intron 1 of 7) B1_Mur2|SINE|Alu -15718 NM_001081269 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Whsc1l1 6720429E03|A530023P05|AI528490|NSD3|WHISTLE Wolf-Hirschhorn syndrome candidate 1-like 1 (human) protein-coding common_peak1_318_2380_0.374692822370088_11.4046983164554_20.2105623312337 chr10 19183568 19186615 + 20.2105623312337 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 17853 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_391_3167_0.327356550390141_11.7930348952747_20.1934402628009 chr10 80797117 80799745 + 20.1934402628009 NA promoter-TSS (NM_013651) promoter-TSS (NM_013651) 195 NM_023900 78670 Mm.41479 NM_023900 ENSMUSG00000035278 Plekhj1 9530063M10Rik pleckstrin homology domain containing, family J member 1 protein-coding common_peak1_33_436_-1.14134089734007_8.20081902083056_20.1852747424962 chr17 50511860 50512514 + 20.1852747424962 NA intron (NM_013880, intron 1 of 5) intron (NM_013880, intron 1 of 5) 2640 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak2_158_1851_-0.494992101663838_10.6073723324283_20.181751359384 chr6 129674266 129681172 + 20.181751359384 NA intron (NM_010652, intron 2 of 5) intron (NM_010652, intron 2 of 5) 1254 NM_001288664 16641 Mm.56899 NM_010652 ENSMUSG00000030167 Klrc1 CD159a|NKG2A|NKG2B killer cell lectin-like receptor subfamily C, member 1 protein-coding common_peak1_104_1217_-0.624718187229513_9.93793932429158_20.1796905363281 chr6 31190572 31192180 + 20.1796905363281 NA intron (NR_110470, intron 1 of 2) intron (NR_110470, intron 1 of 2) 27098 NR_110470 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak1_87_1024_-0.688385829326146_9.65721527972974_20.1772778029397 chr8 108722367 108723763 + 20.1772778029397 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 8421 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_20_300_-1.4561450329612_7.5055471602791_20.171518746108-2 chr2 32724638 32725060 + 20.171518746108 NA intron (NR_045535, intron 1 of 12) intron (NR_045535, intron 1 of 12) -2840 NM_001252547 27387 Mm.9593 NM_013781 ENSMUSG00000059013 Sh2d3c Chat|Nsp3|Shep1 SH2 domain containing 3C protein-coding common_peak1_20_300_-1.4561450329612_7.5055471602791_20.171518746108 chr14 20885350 20885843 + 20.171518746108 NA Intergenic (CAAAA)n|Simple_repeat|Simple_repeat -43837 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak2_121_578_0.713712224244093_9.53427565011128_20.1660937234808 chr6 127573783 127576356 + 20.1660937234808 NA Intergenic A-rich|Low_complexity|Low_complexity -2906 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak1_129_1507_-0.554893881749411_10.280973772394_20.1646046935781 chr12 71015866 71017305 + 20.1646046935781 NA promoter-TSS (NR_045056) promoter-TSS (NR_045056) 618 NM_001081195 238247 Mm.241601 NM_001081195 ENSMUSG00000048118 Arid4a A630009N03|A630067N03Rik|MmRBBP1|Rbbp1 AT rich interactive domain 4A (RBP1-like) protein-coding common_peak1_726_7279_0.220026763148965_12.9397361166605_20.1636364209576 chr8 84974830 84978777 + 20.1636364209576 NA TTS (NM_008416) TTS (NM_008416) 1945 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak1_29_394_-1.21705241046676_8.01718263783108_20.1623609371269 chr11 3335352 3335909 + 20.1623609371269 NA intron (NM_178149, intron 5 of 5) intron (NM_178149, intron 5 of 5) 4899 NM_178149 216505 Mm.390323 NM_178149 ENSMUSG00000034614 Pik3ip1 1500004A08Rik|5830455E04Rik|Crkd|Hgfl phosphoinositide-3-kinase interacting protein 1 protein-coding unique_peak2_16_258_-1.61327202671238_7.21017227433036_20.1469281579675 chr11 102925187 102926034 + 20.1469281579675 NA promoter-TSS (NM_197959) promoter-TSS (NM_197959) -486 NM_197959 70218 Mm.32084 NM_197959 ENSMUSG00000051378 Kif18b 3000004C01Rik kinesin family member 18B protein-coding unique_peak1_21_14_2.95290714708543_5.38334416915123_20.1452128819106 chr5 34192237 34192796 + 20.1452128819106 NA Intergenic Intergenic -4806 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding common_peak2_34_446_-1.12268530665978_8.24278836785343_20.1432221170678 chr2 128943229 128944487 + 20.1432221170678 NA exon (NM_020594, exon 1 of 9) exon (NM_020594, exon 1 of 9) 162 NM_020594 57432 Mm.11675 NM_020594 ENSMUSG00000027387 Zc3h8 AU020882|E130108N08Rik|Fliz1|Zc3hdc8 zinc finger CCCH type containing 8 protein-coding common_peak1_61_736_-0.832226293174408_9.10940766250787_20.1432211790399 chr4 43456709 43457974 + 20.1432211790399 NA Intergenic Intergenic -2715 NM_007654 12517 Mm.188157 NM_007654 ENSMUSG00000028459 Cd72 CD72c|Ly-19|Ly-32|Ly-m19|Lyb-2 CD72 antigen protein-coding common_peak1_44_552_-0.984957032670076_8.61865715389967_20.1424492476876 chr18 12121081 12121849 + 20.1424492476876 NA promoter-TSS (NM_178801) promoter-TSS (NM_178801) 72 NR_110356 338363 Mm.271567 NM_178801 ENSMUSG00000049411 Tmem241 6030446N20Rik transmembrane protein 241 protein-coding common_peak2_330_2507_0.36507061186003_11.4748569387321_20.1391937070702 chr10 14044444 14048290 + 20.1391937070702 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 79988 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_14_237_-1.7127736418966_7.03843094235965_20.1361303560614 chr17 56074225 56074518 + 20.1361303560614 NA intron (NM_024432, intron 1 of 10) intron (NM_024432, intron 1 of 10) 618 NM_024432 66530 Mm.28000 NM_024432 ENSMUSG00000019578 Ubxn6 1200008L11Rik|2210415J11Rik|AU040909|Ubxd1|Ubxdc2 UBX domain protein 6 protein-coding common_peak1_48_595_-0.942292283551478_8.74802237868642_20.1259315879696 chr5 31453760 31454793 + 20.1259315879696 NA intron (NM_172993, intron 2 of 13) intron (NM_172993, intron 2 of 13) 1840 NM_172993 269639 Mm.259127 NM_172993 ENSMUSG00000062761 Zfp512 2500002M11Rik|AI450173|D230008H22|Znf512 zinc finger protein 512 protein-coding common_peak2_146_772_0.62668614913912_9.90766767849441_20.1245359881341 chr17 27839310 27840858 + 20.1245359881341 NA promoter-TSS (NM_011432) promoter-TSS (NM_011432) -3 NM_011432 20630 Mm.103949 NM_011432 ENSMUSG00000024217 Snrpc Snrp1c|U1-C|U1C U1 small nuclear ribonucleoprotein C protein-coding common_peak2_86_1012_-0.691620628135285_9.6386081447335_20.1237147415659 chr19 41353519 41355896 + 20.1237147415659 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 30363 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_71_845_-0.76660386887457_9.34121191868266_20.1224521918331 chr19 41353949 41355384 + 20.1224521918331 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 30404 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak2_221_1423_0.474797047584653_10.7131319547587_20.1217546400997 chr10 81127165 81130348 + 20.1217546400997 NA Intergenic Intergenic -7515 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak1_43_542_-0.998398333924055_8.58560922084233_20.1215360874429 chr6 128769615 128770354 + 20.1215360874429 NA Intergenic Intergenic 18657 NM_008527 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak2_172_2019_-0.470929046146608_10.7446750545659_20.1188170081847 chr2 130423512 130425813 + 20.1188170081847 NA promoter-TSS (NM_001114541) promoter-TSS (NM_001114541) -21 NM_001114541 319513 Mm.482539 NM_178762 ENSMUSG00000037773 Pced1a A930025D01Rik|AI480484|Fam113a PC-esterase domain containing 1A protein-coding common_peak2_399_3258_0.322250800143244_11.8313390368102_20.1080339618812 chr19 34604867 34608880 + 20.1080339618812 NA Intergenic Intergenic -1084 NM_001005858 667370 Mm.271850 NM_001005858 ENSMUSG00000062488 Ifit3b I830012O16Rik interferon-induced protein with tetratricopeptide repeats 3B protein-coding common_peak2_175_1012_0.555216217451882_10.2620265675271_20.1018377696198 chr13 9093782 9094928 + 20.1018377696198 NA intron (NM_001311117, intron 1 of 16) (CGGGG)n|Simple_repeat|Simple_repeat 474 NM_172585 217980 Mm.234944 NM_172585 ENSMUSG00000033499 Larp4b A630096F19|AI256361|D13Wsu64e|Larp5 La ribonucleoprotein domain family, member 4B protein-coding common_peak2_32_425_-1.15738967256496_8.15601478394336_20.0964570470887 chr6 130386042 130388003 + 20.0964570470887 NA promoter-TSS (NM_016659) promoter-TSS (NM_016659) -148 NM_016659 16627 Mm.24399 NM_016659 ENSMUSG00000079853 Klra1 A1|CH29-493D4.3|Klra22|Ly49a|Ly49o<129>|Ly49v killer cell lectin-like receptor, subfamily A, member 1 protein-coding common_peak1_32_425_-1.15738967256496_8.15601478394336_20.0964570470887 chr13 95712599 95713179 + 20.0964570470887 NA intron (NM_027711, intron 12 of 35) intron (NM_027711, intron 12 of 35) 15969 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak1_156_1826_-0.497785284221839_10.5863682765166_20.095648564292 chr14 66867496 66869767 + 20.095648564292 NA promoter-TSS (NM_009955) promoter-TSS (NM_009955) -31 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding common_peak2_263_1825_0.422685831235727_11.0458139656021_20.0956261894627 chr7 35055305 35057578 + 20.0956261894627 NA 5' UTR (NM_009884, exon 1 of 2) 5' UTR (NM_009884, exon 1 of 2) 125 NM_009884 12611 Mm.273090 NM_009884 ENSMUSG00000056216 Cebpg C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP CCAAT/enhancer binding protein (C/EBP), gamma protein-coding common_peak1_62_189_1.15175355162083_8.14573238414136_20.0923131827253 chr12 30584068 30584882 + 20.0923131827253 NA promoter-TSS (NM_172049) promoter-TSS (NM_172049) 32 NM_172049 211986 Mm.34035 NM_172049 ENSMUSG00000043061 Tmem18 BC024093 transmembrane protein 18 protein-coding unique_peak2_19_288_-1.4837914548699_7.43302995506573_20.0899167777879 chr18 11235665 11237457 + 20.0899167777879 NA Intergenic Intergenic -183994 NR_105023 68434 Mm.57626 NR_105022 ENSMUSG00000097222 1010001N08Rik Gata6as RIKEN cDNA 1010001N08 gene ncRNA common_peak2_87_1023_-0.686977634933337_9.65651118253333_20.0861372277254 chr10 60394894 60397663 + 20.0861372277254 NA intron (NR_045556, intron 28 of 68) RMER15-int|LTR|ERVL -3448 NM_001164374 100302688 Mm.444135 NM_001164374 ENSMUSG00000090439 Gm17455 - predicted gene, 17455 protein-coding common_peak2_65_206_1.11044530134791_8.24870960817328_20.0794200276419 chr1 79671275 79672445 + 20.0794200276419 NA 5' UTR (NM_183027, exon 1 of 5) 5' UTR (NM_183027, exon 1 of 5) 112 NM_183027 252903 Mm.32409 NM_183027 ENSMUSG00000054702 Ap1s3 1190009B22|Jr2|[s]3A adaptor-related protein complex AP-1, sigma 3 protein-coding unique_peak2_25_352_-1.30810312863025_7.80947280895606_20.0773752790241 chr5 150117995 150119359 + 20.0773752790241 NA Intergenic CpG 100002 NM_080468 140498 Mm.444643 NM_080468 ENSMUSG00000053368 Rxfp2 Gpr106|Great|Lgr8 relaxin/insulin-like family peptide receptor 2 protein-coding common_peak1_24_341_-1.33183732274951_7.75193385351114_20.06960590004 chrX 101428919 101429447 + 20.06960590004 NA promoter-TSS (NM_023144) promoter-TSS (NM_023144) -468 NM_023144 53610 Mm.280069 NM_023144 ENSMUSG00000031311 Nono AA407051|AV149256|NRB54|P54NRB|nonA non-POU-domain-containing, octamer binding protein protein-coding common_peak1_192_1161_0.52041093904173_10.4425998229254_20.0669520700622 chr15 6707584 6709523 + 20.0669520700622 NA intron (NM_030168, intron 1 of 37) CpG 172 NM_030168 78757 Mm.275811 NM_030168 ENSMUSG00000050310 Rictor 4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik RPTOR independent companion of MTOR, complex 2 protein-coding common_peak1_248_1679_0.439394867655508_10.9339429514939_20.0667543258885 chr5 140507321 140509749 + 20.0667543258885 NA intron (NM_021528, intron 1 of 1) ID_B1|SINE|B4 2926 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_94_387_0.848556948088085_9.02419131623117_20.0421043707261 chr10 20103954 20105994 + 20.0421043707261 NA intron (NM_008580, intron 18 of 29) intron (NM_008580, intron 18 of 29) -43946 NM_008635 17761 Mm.20928 NM_008635 ENSMUSG00000019996 Map7 E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste microtubule-associated protein 7 protein-coding common_peak1_123_1435_-0.567933206716033_10.203873430465_20.0409077225252 chr17 27405172 27407095 + 20.0409077225252 NA Intergenic RSINE1|SINE|B4 48036 NR_106077 102466228 NR_106077 ENSMUSG00000106215 Mir7218 mmu-mir-7218 microRNA 7218 ncRNA common_peak2_164_1921_-0.482967086234549_10.6669090776565_20.0323524114393 chr13 21715174 21718407 + 20.0323524114393 NA promoter-TSS (NM_178199) promoter-TSS (NM_178199) 378 NM_178182 319191 Mm.14767 NM_178182 ENSMUSG00000071516 Hist1h2ai H2a-291A histone cluster 1, H2ai protein-coding common_peak1_107_477_0.774565381231559_9.28814949859653_20.0309934854313 chr4 74251879 74253032 + 20.0309934854313 NA intron (NM_144787, intron 1 of 21) intron (NM_144787, intron 1 of 21) 576 NM_144787 76804 Mm.209059 NM_144787 ENSMUSG00000028397 Kdm4c 2410141F18Rik|AA517467|Gasc1|Jmjd2c lysine (K)-specific demethylase 4C protein-coding common_peak1_263_1826_0.42189596259246_11.0462088999237_20.0272543096773 chr7 35055532 35057766 + 20.0272543096773 NA promoter-TSS (NM_009884) promoter-TSS (NM_009884) -83 NM_009884 12611 Mm.273090 NM_009884 ENSMUSG00000056216 Cebpg C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP CCAAT/enhancer binding protein (C/EBP), gamma protein-coding common_peak2_138_1610_-0.531755997913967_10.3878627797496_20.02235196104 chr5 31219440 31221627 + 20.02235196104 NA promoter-TSS (NM_008014) promoter-TSS (NM_008014) 12 NM_008014 14208 Mm.14501 NM_008014 ENSMUSG00000029147 Ppm1g AI385652|Fin13 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform protein-coding common_peak2_139_1622_-0.529776947651726_10.3995588107221_20.0215470669467 chr6 34779938 34781725 + 20.0215470669467 NA 5' UTR (NM_001289657, exon 1 of 19) 5' UTR (NM_001289657, exon 1 of 19) 399 NM_001289656 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding common_peak2_58_168_1.20464696875964_8.00320292066201_20.0210406392763 chr8 22410793 22412052 + 20.0210406392763 NA promoter-TSS (NM_020560) promoter-TSS (NM_020560) 82 NM_020560 57312 Mm.289402 NM_020560 ENSMUSG00000031533 Mrps31 1500002D03Rik|AA960481|Imogen38|Imogen44 mitochondrial ribosomal protein S31 protein-coding unique_peak1_26_28_2.36422657171202_6.04009428098358_20.0172499531598 chr3 32418944 32419591 + 20.0172499531598 NA Intergenic B3|SINE|B2 -16884 NM_008839 18706 Mm.260521 NM_008839 ENSMUSG00000027665 Pik3ca 6330412C24Rik|caPI3K|p110|p110alpha phosphatidylinositol 3-kinase, catalytic, alpha polypeptide protein-coding unique_peak1_26_28_2.36422657171202_6.04009428098358_20.0172499531598-2 chr4 32372959 32373433 + 20.0172499531598 NA Intergenic Intergenic -44239 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_48_594_-0.939869621284622_8.746811047553_20.0071583336281 chr8 104434858 104436949 + 20.0071583336281 NA intron (NM_001013380, intron 4 of 12) intron (NM_001013380, intron 4 of 12) 7144 NM_001013380 234663 Mm.289583 NM_001013380 ENSMUSG00000035770 Dync1li2 AA409702|C920003I06|Dncli2|Dnclic2|LIC2 dynein, cytoplasmic 1 light intermediate chain 2 protein-coding common_peak1_37_477_-1.0738902933975_8.363921661282_20.0061312920334 chr17 34589023 34589683 + 20.0061312920334 NA promoter-TSS (NM_134116) promoter-TSS (NM_134116) -453 NM_134116 106512 Mm.26584 NM_134116 ENSMUSG00000034786 Gpsm3 AA960287|AGS4 G-protein signalling modulator 3 (AGS3-like, C. elegans) protein-coding unique_peak1_16_4_4.08160816608681_4.36273217793077_20.0058376693878 chr7 139295359 139295796 + 20.0058376693878 NA Intergenic Intergenic 47095 NM_001098636 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak2_126_617_0.690747666269671_9.61683686103921_20.0040688388986 chr10 121625394 121627059 + 20.0040688388986 NA promoter-TSS (NM_001081056) promoter-TSS (NM_001081056) 90 NM_001081056 73192 Mm.25042 NM_001081056 ENSMUSG00000034667 Xpot 1110004L07Rik|3110065H13Rik|AI452076|C79645|EXPORTIN-T exportin, tRNA (nuclear export receptor for tRNAs) protein-coding common_peak1_45_562_-0.971917996800364_8.65103211368005_19.9967810097361 chr11 90248481 90249259 + 19.9967810097361 NA promoter-TSS (NM_026178) promoter-TSS (NM_026178) -606 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak2_308_2280_0.380231668617885_11.3455665656211_19.9966745996211 chr15 98869376 98872827 + 19.9966745996211 NA 5' UTR (NM_001033276, exon 1 of 55) 5' UTR (NM_001033276, exon 1 of 55) 104 NM_001033276 381022 Mm.264889 NM_001033276 ENSMUSG00000048154 Kmt2d ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4 lysine (K)-specific methyltransferase 2D protein-coding common_peak2_187_2201_-0.448243043765638_10.8804772316815_19.9917963169792 chr12 85962484 85965918 + 19.9917963169792 NA intron (NM_001081423, intron 29 of 33) intron (NM_001081423, intron 29 of 33) 114840 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak1_195_2300_-0.437944408940693_10.9490730637537_19.9888910649462 chr2 73452047 73454643 + 19.9888910649462 NA intron (NM_153138, intron 1 of 7) intron (NM_153138, intron 1 of 7) 544 NM_001289722 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak1_82_966_-0.707866210308493_9.56343897432259_19.9880254391439 chr13 101706607 101707439 + 19.9880254391439 NA intron (NM_001077495, intron 4 of 15) intron (NM_001077495, intron 4 of 15) -14393 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_158_1848_-0.492653227807798_10.6062028955003_19.9780019758365 chr2 121449337 121450412 + 19.9780019758365 NA intron (NR_110986, intron 1 of 2) CpG 676 NR_110986 378702 Mm.262252 NM_011354 ENSMUSG00000074884 Serf2 C80083|Msmac1l|m4F5rel small EDRK-rich factor 2 protein-coding common_peak1_269_3237_-0.363961805398295_11.4789063676034_19.9741413694302 chr11 97683189 97686229 + 19.9741413694302 NA 3' UTR (NM_139311, exon 20 of 20) 3' UTR (NM_139311, exon 20 of 20) -1243 NM_001085500 217149 Mm.29659 NM_001085500 ENSMUSG00000078695 Cisd3 Mel-13|Mel13 CDGSH iron sulfur domain 3 protein-coding common_peak1_63_195_1.13476804138267_8.18209386480654_19.9679515605184 chr14 25501301 25502692 + 19.9679515605184 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) -32443 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_290_2096_0.395361733420101_11.2317920128066_19.9674291760052 chr11 106672395 106676446 + 19.9674291760052 NA intron (NM_001305158, intron 12 of 14) intron (NM_001305158, intron 12 of 14) 40861 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak2_87_341_0.895169850180766_8.86543743997628_19.9483157949656 chr2 168954695 168956404 + 19.9483157949656 NA promoter-TSS (NM_009564) promoter-TSS (NM_009564) 38 NM_009564 22722 Mm.2095 NM_009564 ENSMUSG00000027551 Zfp64 - zinc finger protein 64 protein-coding common_peak2_101_435_0.806098763536886_9.17123370654537_19.9477517050191 chr13 95764682 95766183 + 19.9477517050191 NA intron (NM_027711, intron 2 of 35) intron (NM_027711, intron 2 of 35) 68512 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak1_403_3306_0.318765485787054_11.8506900730846_19.9417542403896 chr12 86831566 86833809 + 19.9417542403896 NA Intergenic Intergenic 52127 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_40_508_-1.03007858101027_8.47648255557056_19.9375591988122 chr15 8442118 8442871 + 19.9375591988122 NA intron (NM_201232, intron 1 of 45) intron (NM_201232, intron 1 of 45) 1969 NM_027707 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 Nipped-B homolog (Drosophila) protein-coding common_peak1_55_152_1.25578921851163_7.88528245194847_19.9360478685927 chr3 96414132 96414807 + 19.9360478685927 NA TTS (NR_001579) TTS (NR_001579) 364 NR_001579 21748 NR_001579 ENSMUSG00000064796 Terc mTER|mTR telomerase RNA component ncRNA unique_peak1_37_68_1.71845205780508_6.96775048568071_19.9358596498433 chr2 91953568 91954497 + 19.9358596498433 NA intron (NM_138306, intron 1 of 30) intron (NM_138306, intron 1 of 30) -3684 NM_001166597 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak1_104_1214_-0.621160367816325_9.93616041458498_19.9290038679699 chr15 73162140 73162968 + 19.9290038679699 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 22393 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak2_45_103_1.46463339713877_7.43275641671048_19.9218700715705 chr18 77767172 77767806 + 19.9218700715705 NA intron (NM_146089, intron 1 of 8) intron (NM_146089, intron 1 of 8) 291 NM_146089 225745 Mm.39293 NM_146089 ENSMUSG00000041840 Haus1 BC024400|Ccdc5|HEI-C HAUS augmin-like complex, subunit 1 protein-coding common_peak2_73_865_-0.751827252328958_9.38230958856225_19.9162470804331 chr11 106749857 106752879 + 19.9162470804331 NA exon (NM_001271372, exon 1 of 7) exon (NM_001271372, exon 1 of 7) 142 NM_001033435 380732 Mm.343952 NM_001033435 ENSMUSG00000040528 Milr1 Allergin-1|Gm885|Mca32 mast cell immunoglobulin like receptor 1 protein-coding common_peak1_18_277_-1.51857686932662_7.3596526380602_19.9160234056913 chr7 4647593 4648018 + 19.9160234056913 NA intron (NM_172894, intron 1 of 23) intron (NM_172894, intron 1 of 23) 11145 NM_172894 243819 Mm.258670 NM_172894 ENSMUSG00000052296 Ppp6r1 2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115 protein phosphatase 6, regulatory subunit 1 protein-coding common_peak1_96_1123_-0.649087956857517_9.80988234179217_19.9151285752721 chr9 64789560 64790587 + 19.9151285752721 NA Intergenic Lx2|LINE|L1 -20938 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak1_123_595_0.700738306644856_9.56953767378459_19.9110027807404 chr16 84702547 84704070 + 19.9110027807404 NA Intergenic CpG -9715 NR_132106 100653389 Mm.261808 NR_132106 ENSMUSG00000097418 Mir155hg Bic|Gm26667 Mir155 host gene (non-protein coding) ncRNA common_peak1_93_1089_-0.660369021051913_9.75992790913833_19.8996143033295 chr2 167358602 167359864 + 19.8996143033295 NA Intergenic B1_Mus1|SINE|Alu -10055 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak2_107_478_0.771550343476127_9.28965701747424_19.8985593711105 chr9 96195537 96197266 + 19.8985593711105 NA 5' UTR (NM_001184708, exon 1 of 10) 5' UTR (NM_001184708, exon 1 of 10) 126 NM_001184706 211586 Mm.17977 NM_178667 ENSMUSG00000032411 Tfdp2 1110029I05Rik|A330080J22Rik|DP-3|DP3 transcription factor Dp 2 protein-coding common_peak1_44_550_-0.979729871006526_8.61604357306789_19.8962425100953 chr11 118231909 118232658 + 19.8962425100953 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 16309 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_50_615_-0.919115763567445_8.80722865891118_19.8895540944512 chr2 79120507 79121663 + 19.8895540944512 NA Intergenic Intergenic -134341 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_49_604_-0.928163828839216_8.77670941774235_19.8869118686216 chr5 72735585 72736573 + 19.8869118686216 NA intron (NM_013698, intron 1 of 13) intron (NM_013698, intron 1 of 13) 523 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_154_839_0.600542273946504_10.0145166546394_19.8869099685459 chr16 97850475 97852308 + 19.8869099685459 NA promoter-TSS (NM_144789) promoter-TSS (NM_144789) -164 NM_144789 114604 Mm.328741 NM_144789 ENSMUSG00000014039 Prdm15 C21orf83|E130018M06Rik|ORF62|Zfp298 PR domain containing 15 protein-coding common_peak1_12_214_-1.81938391613488_6.83850089152202_19.8814554323201 chr14 66185861 66186173 + 19.8814554323201 NA intron (NM_172498, intron 5 of 29) intron (NM_172498, intron 5 of 29) 27535 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_187_2199_-0.44693209861329_10.8798217591054_19.8676523613847 chr12 55229408 55231497 + 19.8676523613847 NA promoter-TSS (NM_001100110) promoter-TSS (NM_001100110) -26 NM_001100110 100101806 Mm.471968 NM_001100110 ENSMUSG00000079108 Srp54c E330029E12Rik signal recognition particle 54C protein-coding common_peak2_135_1573_-0.536846630974246_10.3517965100204_19.8671772665463 chr15 78982176 78984424 + 19.8671772665463 NA intron (NM_001024716, intron 1 of 13) CpG 244 NM_001024716 110253 Mm.123714 NM_138579 ENSMUSG00000033088 Triobp AI428493|EST478828|Tara|mKIAA1662 TRIO and F-actin binding protein protein-coding unique_peak2_46_572_-0.959260241330888_8.68276120809146_19.8595019076294 chr2 165233539 165235203 + 19.8595019076294 NA intron (NM_174988, intron 1 of 11) CpG 366 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak1_99_1156_-0.636933334598394_9.85770648180829_19.8557001946805 chr5 76950567 76952210 + 19.8557001946805 NA promoter-TSS (NM_025939) promoter-TSS (NM_025939) -23 NM_025939 67054 Mm.182931 NM_025939 ENSMUSG00000029247 Paics 2610511I09Rik|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase protein-coding common_peak1_185_1102_0.530211956482564_10.3723230538327_19.8348324538388 chr13 85428722 85430205 + 19.8348324538388 NA Intergenic Intergenic -139977 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak2_110_500_0.755251374169488_9.34629248027995_19.833082849214 chr3 52045352 52047593 + 19.833082849214 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 58534 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like 3 (Drosophila) protein-coding common_peak2_212_2508_-0.415602693408871_11.0850954087047_19.8179217205201 chr4 42998338 43001239 + 19.8179217205201 NA intron (NM_009503, intron 1 of 16) CpG 719 NM_009503 269523 Mm.245976 NM_009503 ENSMUSG00000028452 Vcp 3110001E05|CDC48|p97|p97/VCP valosin containing protein protein-coding common_peak2_32_423_-1.15060050690232_8.15262020111204_19.8174159966303 chr2 33370471 33371591 + 19.8174159966303 NA intron (NM_001290570, intron 1 of 16) intron (NM_001290570, intron 1 of 16) 463 NM_001290570 241308 Mm.274249 NM_175211 ENSMUSG00000038831 Ralgps1 5830418G11Rik|AI853783|AI854138|RALGEF2|RALGPS1A|RalGEF 2|mKIAA0351 Ral GEF with PH domain and SH3 binding motif 1 protein-coding common_peak1_67_219_1.07540116982222_8.31906029843577_19.8167805471269 chr7 47050619 47051271 + 19.8167805471269 NA intron (NM_026436, intron 1 of 2) CpG 305 NM_026436 67893 Mm.27338 NM_026436 ENSMUSG00000010307 Tmem86a 1810054O13Rik|AI414959|AW742698 transmembrane protein 86A protein-coding common_peak1_40_507_-1.02724142170674_8.4750639759188_19.8099021275614 chr1 119525946 119526584 + 19.8099021275614 NA 5' UTR (NM_146103, exon 1 of 1) 5' UTR (NM_146103, exon 1 of 1) 111 NM_146103 226351 Mm.439806 NM_146103 ENSMUSG00000098923 Tmem185b 2500001K11Rik transmembrane protein 185B protein-coding common_peak2_244_1644_0.441109955166402_10.9044268462058_19.8072022059145 chr19 9052337 9056903 + 19.8072022059145 NA intron (NM_001286518, intron 6 of 6) PB1D7|SINE|Alu 33336 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_39_497_-1.04225539325095_8.43887423544261_19.8064005853005 chr6 51060188 51060980 + 19.8064005853005 NA Intergenic Intergenic 209326 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA common_peak2_61_185_1.15413570481263_8.11622666351435_19.8042417658009 chr11 93987112 93988580 + 19.8042417658009 NA Intergenic Intergenic -8245 NM_001199203 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding common_peak2_133_1548_-0.539965417453489_10.3271387200628_19.7999037532222 chr8 71591065 71593111 + 19.7999037532222 NA promoter-TSS (NM_025396) promoter-TSS (NM_025396) -96 NM_025396 66171 Mm.282284 NM_025396 ENSMUSG00000031807 Pgls 1110030K05Rik|AI447866|Plgs 6-phosphogluconolactonase protein-coding unique_peak2_30_402_-1.18795382379366_8.06065911663114_19.7966505729203 chr11 69062319 69064243 + 19.7966505729203 NA Intergenic Intergenic 3506 NM_028005 71923 Mm.340257 NM_028005 ENSMUSG00000045176 Borcs6 2310047M10Rik BLOC-1 related complex subunit 6 protein-coding common_peak1_128_1490_-0.55220285587621_10.2659631143453_19.7962629487359 chr5 31219724 31221159 + 19.7962629487359 NA 5' UTR (NM_008014, exon 1 of 10) 5' UTR (NM_008014, exon 1 of 10) 104 NM_008014 14208 Mm.14501 NM_008014 ENSMUSG00000029147 Ppm1g AI385652|Fin13 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform protein-coding common_peak2_98_1144_-0.639677419170143_9.84129317339924_19.7885382450944 chr13 97385313 97388509 + 19.7885382450944 NA Intergenic Intergenic -48059 NR_110432 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 ENSMUSG00000078952|Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA common_peak2_102_1190_-0.626409814087374_9.90475279082043_19.787877432504 chr2 35410830 35414112 + 19.787877432504 NA intron (NM_001308299, intron 6 of 7) B4|SINE|B4 -15297 NM_001272040 74854 Mm.159338 NM_001080709 ENSMUSG00000079421 4930402F06Rik - RIKEN cDNA 4930402F06 gene protein-coding common_peak2_94_1099_-0.65481801813681_9.77587879934362_19.7871140789657 chr4 40756896 40758523 + 19.7871140789657 NA intron (NM_021535, intron 1 of 11) CpG 176 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding common_peak1_60_722_-0.833332385904145_9.08118564399905_19.7836269800739 chr11 46389675 46390348 + 19.7836269800739 NA promoter-TSS (NM_010583) promoter-TSS (NM_010583) -496 NM_001281965 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding common_peak1_270_1898_0.412443343197909_11.0972458617485_19.7821680728812 chr3 110249557 110251077 + 19.7821680728812 NA exon (NM_178891, exon 1 of 1) exon (NM_178891, exon 1 of 1) 682 NM_178891 99890 Mm.36115 NM_178891 ENSMUSG00000049300 Prmt6 AW124876|BB233495|Hrmt1l6 protein arginine N-methyltransferase 6 protein-coding common_peak2_66_213_1.08907671374858_8.28600534327543_19.7784311769764 chr2 125122787 125123837 + 19.7784311769764 NA intron (NM_010852, intron 1 of 15) CpG 348 NM_001162417 17876 Mm.18535 NM_010852 ENSMUSG00000027201 Myef2 9430071B01|mKIAA1341 myelin basic protein expression factor 2, repressor protein-coding common_peak2_77_279_0.97027274384925_8.61441938886959_19.7735373639939 chr5 113137493 113139169 + 19.7735373639939 NA intron (NM_172884, intron 1 of 7) CpG 24982 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak2_80_942_-0.714771877682217_9.52372802183399_19.7733684918818 chr7 3703246 3704954 + 19.7733684918818 NA promoter-TSS (NM_029767) promoter-TSS (NM_029767) 59 NM_029767 76846 Mm.13944 NM_029767 ENSMUSG00000006333 Rps9 3010033P07Rik|AL022771|AL022885 ribosomal protein S9 protein-coding common_peak1_250_1703_0.433087860588161_10.9512535505199_19.7675661667503 chr6 119386809 119389400 + 19.7675661667503 NA intron (NM_197985, intron 1 of 7) intron (NM_197985, intron 1 of 7) 29379 NM_197985 68465 Mm.291826 NM_197985 ENSMUSG00000030168 Adipor2 1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2 adiponectin receptor 2 protein-coding common_peak1_452_3869_0.294537050107062_12.0653863760853_19.76322335708 chr2 25180671 25183417 + 19.76322335708 NA 3' UTR (NM_025980, exon 1 of 1) 3' UTR (NM_025980, exon 1 of 1) 1286 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak2_110_1281_-0.600262379254046_10.0240493569917_19.7561420838041 chr17 32964968 32967092 + 19.7561420838041 NA promoter-TSS (NR_033585) promoter-TSS (NR_033585) 199 NM_153063 224691 Mm.328953 NM_153063 ENSMUSG00000053600 Zfp472 KRIM-1|Krim-1A|Krim-1B|Krim1 zinc finger protein 472 protein-coding unique_peak2_43_539_-0.990405543170525_8.58161282546557_19.7495300468594 chr18 31788316 31790031 + 19.7495300468594 NA promoter-TSS (NM_027101) promoter-TSS (NM_027101) -3 NM_027101 69241 Mm.279898 NM_027002 ENSMUSG00000024258 Polr2d 2310002G05Rik|2610028L19Rik|HSRBP4|RBP4 polymerase (RNA) II (DNA directed) polypeptide D protein-coding common_peak1_43_539_-0.990405543170525_8.58161282546557_19.7495300468594 chr19 8888160 8888805 + 19.7495300468594 NA promoter-TSS (NR_104416) promoter-TSS (NR_104416) 288 NR_027866 67531 Mm.475113 NR_027866 5730408K05Rik 2610018C13Rik RIKEN cDNA 5730408K05 gene ncRNA common_peak2_59_711_-0.840464687182338_9.05550108737523_19.7469593117921 chr9 44175002 44178280 + 19.7469593117921 NA intron (NM_007619, intron 2 of 15) B1_Mur1|SINE|Alu 41983 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding common_peak1_18_276_-1.5133779626523_7.35705318472304_19.7455889875142 chr7 135647492 135648021 + 19.7455889875142 NA TTS (NR_015548) TTS (NR_015548) -4143 NM_001316681 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak2_109_493_0.759536097987594_9.32813528057848_19.7431737028958 chr12 8207369 8208738 + 19.7431737028958 NA promoter-TSS (NM_172401) promoter-TSS (NM_172401) -54 NM_172401 68832 Mm.25608 NM_172401 ENSMUSG00000037669 Ldah 1110057K04Rik|mLDAH lipid droplet associated hydrolase protein-coding common_peak2_109_493_0.759536097987594_9.32813528057848_19.7431737028958-2 chr17 46282056 46283669 + 19.7431737028958 NA intron (NM_028751, intron 1 of 10) intron (NM_028751, intron 1 of 10) 164 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak1_30_42_2.04041745003221_6.4464734797182_19.7370762388415 chr2 30464910 30465666 + 19.7370762388415 NA Intergenic Intergenic 8911 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak1_34_443_-1.11297015182657_8.23793079043682_19.7342556150288 chr17 47942290 47942998 + 19.7342556150288 NA Intergenic C-rich|Low_complexity|Low_complexity -18012 NM_001110825 74123 Mm.240062 NM_028767 ENSMUSG00000023991 Foxp4 1200010K03Rik|2310007G05Rik|mFKHLA forkhead box P4 protein-coding common_peak1_157_865_0.590488187572948_10.0534673085132_19.7290344093733 chr8 104640637 104642440 + 19.7290344093733 NA intron (NM_026753, intron 1 of 4) CpG 190 NM_026753 68523 Mm.279 NM_026753 ENSMUSG00000031879 Fam96b 1110019N10Rik family with sequence similarity 96, member B protein-coding common_peak2_207_2444_-0.420360571639597_11.0454384640198_19.7240045639897 chr6 128841559 128846092 + 19.7240045639897 NA Intergenic Intergenic -17510 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak1_114_1326_-0.587386264398363_10.080259523171_19.7239682315603-2 chr7 4914830 4916166 + 19.7239682315603 NA intron (NM_170759, intron 1 of 2) CpG 281 NM_170759 232816 Mm.27442 NM_170759 ENSMUSG00000074406 Zfp628 Zec|Znf628 zinc finger protein 628 protein-coding common_peak1_114_1326_-0.587386264398363_10.080259523171_19.7239682315603 chr13 101694386 101696096 + 19.7239682315603 NA intron (NM_001077495, intron 7 of 15) intron (NM_001077495, intron 7 of 15) -2611 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_99_423_0.811319359945896_9.13358013453615_19.7235853763596 chr4 132986262 132987848 + 19.7235853763596 NA intron (NM_010208, intron 3 of 12) intron (NM_010208, intron 3 of 12) 12960 NM_010208 14191 Mm.271665 NM_010208 ENSMUSG00000028874 Fgr - FGR proto-oncogene, Src family tyrosine kinase protein-coding common_peak2_84_986_-0.695264426603906_9.59927406115444_19.7182528885019 chr11 33700890 33703411 + 19.7182528885019 NA intron (NM_001190885, intron 1 of 8) G-rich|Low_complexity|Low_complexity -123193 NM_146017 216643 Mm.99989 NM_146017 ENSMUSG00000020159 Gabrp - gamma-aminobutyric acid (GABA) A receptor, pi protein-coding common_peak1_61_732_-0.824374872213149_9.10548195202724_19.7160857798301 chr2 132511885 132512642 + 19.7160857798301 NA intron (NR_028286, intron 2 of 3) L1M3|LINE|L1 21535 NR_028286 70371 Mm.394667 NR_028286 ENSMUSG00000086379 1700026D11Rik - RIKEN cDNA 1700026D11 gene ncRNA common_peak2_104_458_0.783229887263012_9.23396528704531_19.7124531172196 chr12 82225032 82226930 + 19.7124531172196 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 55965 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak2_146_776_0.619239964656257_9.91139077073584_19.7075178029831 chr2 68860821 68863068 + 19.7075178029831 NA intron (NM_172856, intron 1 of 9) CpG 387 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak1_349_2717_0.34783387182082_11.5822466766778_19.7056182697461 chr13 44506242 44509019 + 19.7056182697461 NA Intergenic Intergenic 67903 NR_045489 69491 Mm.392410 NR_045489 ENSMUSG00000098144 1700029N11Rik - RIKEN cDNA 1700029N11 gene ncRNA common_peak2_609_5776_0.243132569771522_12.6176710642259_19.7045277478486 chr4 62632136 62639810 + 19.7045277478486 NA intron (NM_019492, intron 16 of 19) intron (NM_019492, intron 16 of 19) 16301 NM_134257 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_42_90_1.53793253005525_7.27676090522632_19.703756246759 chr8 25950423 25951275 + 19.703756246759 NA intron (NM_029884, intron 14 of 17) RLTR33|LTR|ERVK 25895 NM_029884 52120 Mm.28326 NM_029884 ENSMUSG00000037260 Hgsnat 9430010M12Rik|AW208455|D8Ertd354e|Tmem76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding common_peak2_47_113_1.40749776511371_7.5366388967216_19.6984789473838 chr9 48820985 48821898 + 19.6984789473838 NA intron (NM_001033324, intron 2 of 6) intron (NM_001033324, intron 2 of 6) 14504 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding common_peak2_494_4364_0.27779411217568_12.2306629946046_19.697536943441 chr12 25163098 25167104 + 19.697536943441 NA Intergenic Intergenic 35927 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_74_261_0.996726706752217_8.53178635491356_19.6843091445013 chr14 79300611 79301672 + 19.6843091445013 NA intron (NM_025427, intron 1 of 4) CpG 494 NM_025427 66214 Mm.29811 NM_025427 ENSMUSG00000022018 Rgcc 1190002H23Rik|Rgc-32|Rgc32 regulator of cell cycle protein-coding common_peak1_299_3623_-0.339992909383854_11.6533707853543_19.6832144957253 chr16 91646256 91648713 + 19.6832144957253 NA promoter-TSS (NM_178880) promoter-TSS (NM_178880) -340 NM_019973 20658 Mm.46401 NM_019973 ENSMUSG00000022961 Son 2900011L12Rik|AA409051|AU067731|C81487|mKIAA1019|nrebp Son DNA binding protein protein-coding common_peak2_177_1034_0.544215627563856_10.2875228661686_19.6808149393984 chr5 129500467 129502229 + 19.6808149393984 NA 5' UTR (NM_172276, exon 1 of 18) 5' UTR (NM_172276, exon 1 of 18) 117 NM_172276 231769 Mm.288714 NM_172276 ENSMUSG00000029439 Sfswap 1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8 splicing factor, suppressor of white-apricot homolog (Drosophila) protein-coding common_peak1_62_191_1.13664665923063_8.15328583033647_19.6783739080385 chr11 4637646 4638332 + 19.6783739080385 NA intron (NM_029291, intron 1 of 19) intron (NM_029291, intron 1 of 19) 196 NM_029291 75452 Mm.439906 NM_029291 ENSMUSG00000020412 Ascc2 1700011I11Rik|2610034L15Rik|AI482016|ASC1p100|AW046480 activating signal cointegrator 1 complex subunit 2 protein-coding common_peak1_432_3640_0.302629412237172_11.9814337315631_19.6770740931514 chr19 41262878 41264759 + 19.6770740931514 NA exon (NM_133352, exon 1 of 15) exon (NM_133352, exon 1 of 15) 186 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak1_15_245_-1.64626124221407_7.1193838842322_19.6763961651069 chr7 66233076 66233429 + 19.6763961651069 NA Intergenic Intergenic 123737 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_283_2030_0.398409643923575_11.1871793462579_19.6739247881002 chr19 41829198 41831225 + 19.6739247881002 NA exon (NM_008043, exon 1 of 1) exon (NM_008043, exon 1 of 1) 241 NM_008043 14296 Mm.4573 NM_008043 ENSMUSG00000067199 Frat1 AW060382 frequently rearranged in advanced T cell lymphomas protein-coding common_peak2_41_86_1.56114345913613_7.22351522541679_19.6681148368288 chr10 41751757 41752420 + 19.6681148368288 NA intron (NM_001243075, intron 1 of 9) RMER13A|LTR|ERVK 57575 NM_001243075 103268 Mm.338605 NM_026643 ENSMUSG00000019813 Cep57l1 2410017P07Rik|4930484D11Rik|AI607327|cep57R centrosomal protein 57-like 1 protein-coding common_peak1_92_1075_-0.660645641669033_9.74113954172211_19.6619423476506 chr18 46597694 46598950 + 19.6619423476506 NA promoter-TSS (NM_025698) promoter-TSS (NM_025698) 618 NM_010120 13664 Mm.262037 NM_010120 ENSMUSG00000057561 Eif1a C76390|Ef1a|Eftu|Eif4c|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A protein-coding common_peak1_136_697_0.649254330325206_9.77171039137226_19.6567835133185 chr14 25533630 25535557 + 19.6567835133185 NA TTS (NR_037236) TTS (NR_037236) 154 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak2_30_401_-1.18436948644462_8.05886694795662_19.6542384491123 chr5 107757676 107759991 + 19.6542384491123 NA intron (NM_007964, intron 17 of 17) intron (NM_007964, intron 17 of 17) -33028 NM_001267621 14581 Mm.2078 NM_010278 ENSMUSG00000029275 Gfi1 AW495828|Gfi-1|Pal-1|Pal1 growth factor independent 1 protein-coding common_peak1_59_175_1.17583712514676_8.04735018121068_19.65374032924 chr7 127289358 127290434 + 19.65374032924 NA Intergenic Intergenic -6364 NM_001253873 16408 Mm.1618 NM_008400 ENSMUSG00000030830 Itgal (p180)|Cd11a|LFA-1|LFA-1A|Ly-15|Ly-21 integrin alpha L protein-coding common_peak1_133_1546_-0.538101470112956_10.3262067463926_19.6528095189714 chr10 53596696 53598312 + 19.6528095189714 NA intron (NM_025541, intron 1 of 3) CpG 543 NM_025541 66403 Mm.272989 NM_025541 ENSMUSG00000019857 Asf1a 2310079C17Rik|C79052 anti-silencing function 1A histone chaperone protein-coding common_peak2_399_3267_0.318272168736126_11.8333283525137_19.6493245833307 chr7 25679691 25685365 + 19.6493245833307 NA intron (NM_172148, intron 1 of 2) intron (NM_172148, intron 1 of 2) 1370 NM_172148 232987 Mm.22849 NM_172148 ENSMUSG00000063439 B9d2 stumpy B9 protein domain 2 protein-coding unique_peak1_19_10_3.23170260899348_5.07528292313404_19.6417895367002-2 chr5 107944484 107944916 + 19.6417895367002 NA intron (NM_026062, intron 1 of 4) intron (NM_026062, intron 1 of 4) 42377 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding unique_peak1_19_10_3.23170260899348_5.07528292313404_19.6417895367002 chr19 5831234 5831689 + 19.6417895367002 NA non-coding (NR_131212, exon 1 of 1) non-coding (NR_131212, exon 1 of 1) 14017 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak1_54_655_-0.876260986232168_8.919421511502_19.6413116004577 chr4 62680753 62681460 + 19.6413116004577 NA intron (NM_001310706, intron 1 of 6) intron (NM_001310706, intron 1 of 6) 7132 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_93_1086_-0.656392826414933_9.75793981181984_19.6366656061459 chr16 16358024 16359109 + 19.6366656061459 NA promoter-TSS (NR_075074) promoter-TSS (NR_075074) 9 NM_001276341 74006 Mm.218820 NM_152816 ENSMUSG00000022789 Dnm1l 6330417M19Rik|AI450666|Dlp1|Dnmlp1|Drp1|python dynamin 1-like protein-coding common_peak1_69_818_-0.769661615931119_9.29288883367545_19.6354098922091 chr16 78537073 78538334 + 19.6354098922091 NA Intergenic Intergenic -22613 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak2_33_432_-1.1280746425662_8.19418589344363_19.6340674040408 chr11 4096009 4097408 + 19.6340674040408 NA TTS (NM_144520) TTS (NM_144520) -1277 NM_026443 67900 Mm.41719 NM_026443 ENSMUSG00000004748 Mtfp1 1700020C11Rik|2610507A21Rik|AV005788|Mtp18 mitochondrial fission process 1 protein-coding common_peak1_33_432_-1.1280746425662_8.19418589344363_19.6340674040408 chr4 11721696 11722358 + 19.6340674040408 NA Intergenic Intergenic 17580 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding common_peak1_308_2286_0.376441749518351_11.3474615251708_19.6319411298244 chr1 182515979 182518127 + 19.6319411298244 NA intron (NM_009794, intron 1 of 20) CpG 430 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_211_2492_-0.414700779675677_11.0763167776537_19.6265316285599 chr5 136169347 136173089 + 19.6265316285599 NA promoter-TSS (NM_178751) promoter-TSS (NM_178751) -562 NM_178751 269717 Mm.308396 NM_178751 ENSMUSG00000039747 Orai2 A730041O15Rik|Tmem142b ORAI calcium release-activated calcium modulator 2 protein-coding common_peak1_53_143_1.27889487658364_7.80937243973413_19.6200846670591 chr12 24592711 24593668 + 19.6200846670591 NA intron (NM_145890, intron 6 of 13) intron (NM_145890, intron 6 of 13) 12470 NM_145890 195733 Mm.263068 NM_145890 ENSMUSG00000020656 Grhl1 LBP-32|MGR|Tcfcp2l2 grainyhead-like 1 (Drosophila) protein-coding common_peak1_53_143_1.27889487658364_7.80937243973413_19.6200846670591-2 chr2 128377078 128377786 + 19.6200846670591 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 51919 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_102_445_0.790647983856434_9.19622389184852_19.6166617584431 chr6 134931914 134933647 + 19.6166617584431 NA intron (NR_037956, intron 1 of 1) ID_B1|SINE|B4 3688 NR_037955 381822 Mm.5935 NR_037955 ENSMUSG00000098318 Lockd 1190002F15Rik|AI120476|Droc lncRNA downstream of Cdkn1b ncRNA common_peak1_82_311_0.924103650306099_8.7474540440153_19.6080089144582 chr8 40307374 40308695 + 19.6080089144582 NA promoter-TSS (NM_030110) promoter-TSS (NM_030110) -17 NM_030110 78506 Mm.169893 NM_030110 ENSMUSG00000039478 Micu3 2900075B16Rik|Efha2 mitochondrial calcium uptake family, member 3 protein-coding common_peak2_439_3722_0.298878051093471_12.0116889263982_19.5905713989699 chr19 41262548 41265100 + 19.5905713989699 NA exon (NM_133352, exon 1 of 15) exon (NM_133352, exon 1 of 15) 180 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak1_167_950_0.564010046497003_10.1753065541091_19.5875115987489 chr10 93539580 93540955 + 19.5875115987489 NA promoter-TSS (NM_175488) promoter-TSS (NM_175488) -234 NM_027908 71761 Mm.244518 NM_027908 ENSMUSG00000015890 Amdhd1 1300019J08Rik amidohydrolase domain containing 1 protein-coding common_peak1_19_285_-1.46873710914761_7.42550278220458_19.5869780297944 chr9 32915023 32915402 + 19.5869780297944 NA intron (NR_131058, intron 1 of 3) intron (NR_131058, intron 1 of 3) 13754 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak1_166_1939_-0.475094331386531_10.6842937713812_19.584860695187 chr14 66198139 66199902 + 19.584860695187 NA intron (NM_172498, intron 2 of 29) B3A|SINE|B2 14532 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_29_390_-1.20236836470965_8.00984061495253_19.5840458186627 chr7 44548129 44548809 + 19.5840458186627 NA intron (NM_011131, intron 1 of 26) intron (NM_011131, intron 1 of 26) 346 NM_011131 18971 Mm.16549 NM_011131 ENSMUSG00000038644 Pold1 125kDa polymerase (DNA directed), delta 1, catalytic subunit protein-coding common_peak1_58_170_1.18767389015593_8.01168945996386_19.5840458186627 chr10 82992215 82993195 + 19.5840458186627 NA intron (NM_021439, intron 1 of 2) B4|SINE|B4 7208 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_18_275_-1.50816025338128_7.35444433008753_19.5755637737472 chr5 151367910 151368358 + 19.5755637737472 NA promoter-TSS (NR_045699) promoter-TSS (NR_045699) -541 NR_045700 625175 Mm.443286 NR_045699 ENSMUSG00000097321 1700028E10Rik A630054D14|Gm6561 RIKEN cDNA 1700028E10 gene ncRNA common_peak1_18_275_-1.50816025338128_7.35444433008753_19.5755637737472-2 chr9 32915462 32915901 + 19.5755637737472 NA intron (NR_131058, intron 1 of 3) intron (NR_131058, intron 1 of 3) 13285 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak2_122_590_0.698563461041179_9.55629605069812_19.5735783156924 chr4 129376435 129378288 + 19.5735783156924 NA intron (NM_028603, intron 1 of 4) GC_rich|Low_complexity|Low_complexity 667 NM_028603 73680 Mm.32997 NM_028603 ENSMUSG00000028807 Zbtb8a 2410081M15Rik|AI480941 zinc finger and BTB domain containing 8a protein-coding common_peak1_236_1571_0.447848105007996_10.8423095547626_19.5691718647563 chr8 117157101 117158905 + 19.5691718647563 NA promoter-TSS (NM_001081151) promoter-TSS (NM_001081151) -132 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding common_peak1_121_583_0.701307203353311_9.54047816055667_19.5660824057002 chr6 29467529 29468862 + 19.5660824057002 NA intron (NM_025381, intron 1 of 1) intron (NM_025381, intron 1 of 1) 412 NM_025381 66144 Mm.371614 NM_025381 ENSMUSG00000004285 Atp6v1f 1110004G16Rik ATPase, H+ transporting, lysosomal V1 subunit F protein-coding common_peak1_40_505_-1.02155030962888_8.47221841987987_19.5554353172586 chr2 131234091 131234617 + 19.5554353172586 NA 5' UTR (NM_144888, exon 1 of 7) 5' UTR (NM_144888, exon 1 of 7) 291 NM_144888 228607 Mm.287226 NM_144888 ENSMUSG00000037523 Mavs D430028G21Rik|IPS-1|Visa|cardif mitochondrial antiviral signaling protein protein-coding common_peak2_156_1818_-0.491454193245836_10.5832027310286_19.5518030465858 chr18 36743715 36745848 + 19.5518030465858 NA promoter-TSS (NM_010885) promoter-TSS (NM_010885) 125 NM_011879 24010 Mm.30234 NM_011879 ENSMUSG00000024474 Ik MuRED IK cytokine protein-coding common_peak1_486_4272_0.279692776527069_12.2008799899446_19.5510240818453 chr15 76298233 76301763 + 19.5510240818453 NA intron (NM_153122, intron 19 of 26) intron (NM_153122, intron 19 of 26) 5564 NM_001195537 100503915 Mm.393455 NM_001195537 ENSMUSG00000071724 Smpd5 ENSMUSG00000071724|Gm10345|MA-nSMase sphingomyelin phosphodiesterase 5 protein-coding common_peak2_155_1806_-0.493212718884026_10.5727744314226_19.5417548829266 chr7 97748020 97750438 + 19.5417548829266 NA Intergenic B3|SINE|B2 -10982 NM_175105 66333 Mm.29756 NM_175105 ENSMUSG00000042797 Aqp11 1700015P13Rik|AI648923|sjds aquaporin 11 protein-coding common_peak2_86_337_0.891918394383669_8.84683863347402_19.5417098279135 chr17 66518608 66519932 + 19.5417098279135 NA intron (NM_024448, intron 1 of 5) CpG 400 NM_024448 19328 Mm.248313 NM_024448 ENSMUSG00000023460 Rab12 2900054P15Rik|AW555448|C77700 RAB12, member RAS oncogene family protein-coding common_peak1_301_3647_-0.337757317992834_11.6640113551683_19.5401792021583 chr15 86067542 86070572 + 19.5401792021583 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 10330 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_191_1158_0.514947550644692_10.4361386263288_19.5398621248641 chr1 15805254 15806655 + 19.5398621248641 NA exon (NM_009352, exon 1 of 10) exon (NM_009352, exon 1 of 10) 308 NM_001286628 21749 Mm.4306 NM_009352 ENSMUSG00000025925 Terf1 Pin2|Trbf1|Trf1 telomeric repeat binding factor 1 protein-coding common_peak1_90_1051_-0.666573946572255_9.70563201600617_19.5398250973499 chr5 122820770 122821609 + 19.5398250973499 NA 5' UTR (NM_021505, exon 1 of 17) 5' UTR (NM_021505, exon 1 of 17) 153 NM_001289518 59008 Mm.332667 NM_021505 ENSMUSG00000029472 Anapc5 2510006G12Rik|AA408751|AA536819|AA986414|APC5|Anpc5 anaphase-promoting complex subunit 5 protein-coding common_peak2_352_2752_0.344478316064402_11.5990280526278_19.5358878079776 chr8 128611665 128619002 + 19.5358878079776 NA Intergenic Intergenic -70321 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_117_1359_-0.577252219909521_10.1207648261829_19.5315725905211 chr7 141446844 141448479 + 19.5315725905211 NA promoter-TSS (NM_026020) promoter-TSS (NM_026020) 11 NM_026020 67186 Mm.380435 NM_026020 ENSMUSG00000025508 Rplp2 2700049I22Rik ribosomal protein, large P2 protein-coding common_peak1_117_1359_-0.577252219909521_10.1207648261829_19.5315725905211 chr13 111867453 111868716 + 19.5315725905211 NA intron (NR_130345, intron 1 of 2) intron (NR_130345, intron 1 of 2) 148 NR_130345 102636620 Mm.402328 NR_130345 ENSMUSG00000086111 Gm15326 OTTMUSG00000020187 predicted gene 15326 ncRNA common_peak1_42_526_-0.995931981383263_8.54369316094558_19.5312625692627 chr2 73892943 73893644 + 19.5312625692627 NA promoter-TSS (NM_001284373) promoter-TSS (NM_001284373) -654 NM_001284370 11909 Mm.209903 NM_009715 ENSMUSG00000027104 Atf2 Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|Tg(Gzma-Klra1)7Wum|mXBP activating transcription factor 2 protein-coding common_peak2_54_654_-0.874060078038896_8.91832105740536_19.5293378655706 chr10 83161078 83162989 + 19.5293378655706 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 175784 NM_177388 338365 Mm.67073 NM_177388 ENSMUSG00000034591 Slc41a2 A230035L05Rik|SLC41A1-L1 solute carrier family 41, member 2 protein-coding common_peak1_85_994_-0.686213233990706_9.61544609843566_19.5218863016753 chr8 107503379 107504432 + 19.5218863016753 NA intron (NM_025830, intron 6 of 23) intron (NM_025830, intron 6 of 23) -47339 NR_029553 387158 NR_029553 ENSMUSG00000065439 Mir140 Mirn140|mir-140|mmu-mir-140 microRNA 140 ncRNA unique_peak2_11_201_-1.87104832584606_6.72268731982877_19.5176332295113 chr17 29584205 29585662 + 19.5176332295113 NA intron (NR_045447, intron 3 of 3) intron (NR_045447, intron 3 of 3) 11372 NR_045447 74092 Mm.396264 NR_045447 ENSMUSG00000089900 Tbc1d22bos 0610038L08Rik TBC1 domain family, member 22B, opposite strand ncRNA common_peak1_77_906_-0.725402979734305_9.46225725066137_19.5173826016465 chr1 171629431 171630424 + 19.5173826016465 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 11973 NR_106151 102465784 NR_106151 ENSMUSG00000098316 Mir7683 Gm27950|mmu-mir-7683 microRNA 7683 ncRNA common_peak2_70_238_1.03229273786627_8.41701317691388_19.5116680397581 chr17 49428286 49429106 + 19.5116680397581 NA intron (NM_020042, intron 1 of 10) intron (NM_020042, intron 1 of 10) 332 NM_020042 56738 Mm.22256 NM_020042 ENSMUSG00000064120 Mocs1 3110045D15Rik|AI043170|AW536397 molybdenum cofactor synthesis 1 protein-coding common_peak2_105_1220_-0.611493408357935_9.94810078080843_19.5042333891065 chr5 122820425 122822146 + 19.5042333891065 NA promoter-TSS (NM_021505) promoter-TSS (NM_021505) 57 NM_001289518 59008 Mm.332667 NM_021505 ENSMUSG00000029472 Anapc5 2510006G12Rik|AA408751|AA536819|AA986414|APC5|Anpc5 anaphase-promoting complex subunit 5 protein-coding common_peak1_512_4584_0.270061733374323_12.2977368851696_19.5041461618278 chr15 27667596 27673292 + 19.5041461618278 NA intron (NM_001242424, intron 1 of 8) intron (NM_001242424, intron 1 of 8) 11098 NM_001242424 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak2_200_1239_0.498553811028767_10.5254013107886_19.501950659676 chr10 79915986 79918022 + 19.501950659676 NA promoter-TSS (NM_053244) promoter-TSS (NM_053244) 33 NM_053244 114229 Mm.191035 NM_053244 ENSMUSG00000035773 Kiss1r Gpr54|KiSS-1 KISS1 receptor protein-coding common_peak2_136_1580_-0.530284095823511_10.3614796044466_19.5017977770364 chr15 81465313 81467622 + 19.5017977770364 NA intron (NM_019712, intron 1 of 4) CpG 151 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak1_137_1592_-0.528322920092158_10.3733690914792_19.5016898667497 chr7 38214062 38215514 + 19.5016898667497 NA Intergenic Intergenic 13206 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding common_peak2_35_61_1.77710136267215_6.84274699172295_19.4981386223565 chr1 128712494 128713060 + 19.4981386223565 NA Intergenic Intergenic -120478 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_206_1293_0.489107934407571_10.5821758691963_19.4967273931281 chr16 90283165 90284651 + 19.4967273931281 NA intron (NM_178923, intron 1 of 19) CpG 517 NM_178923 224432 Mm.439811 NM_178923 ENSMUSG00000022983 Scaf4 AA517739|Sfrs15|Sra4|Srsf15 SR-related CTD-associated factor 4 protein-coding common_peak1_63_751_-0.805110966179758_9.15203336858776_19.4873543826174 chr15 79932164 79933278 + 19.4873543826174 NA promoter-TSS (NM_144811) promoter-TSS (NM_144811) -75 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak2_118_561_0.712646050018718_9.49074934523028_19.4817303463042 chr2 11602080 11603488 + 19.4817303463042 NA intron (NM_152824, intron 1 of 11) intron (NM_152824, intron 1 of 11) 415 NM_152824 76938 Mm.182769 NM_152824 ENSMUSG00000037197 Rbm17 2700027J02Rik RNA binding motif protein 17 protein-coding common_peak1_37_473_-1.06176673431501_8.35785988174075_19.4805881022949 chr10 52382221 52382737 + 19.4805881022949 NA promoter-TSS (NM_053187) promoter-TSS (NM_053187) -355 NM_001199272 94221 Mm.390258 NM_053187 ENSMUSG00000019861 Gopc 2210402P09Rik|AI844555|CAL|FIG|GOPC1|PIST golgi associated PDZ and coiled-coil motif containing protein-coding common_peak1_90_364_0.860592388952668_8.94204884824371_19.4803629487888 chr11 98773751 98774939 + 19.4803629487888 NA intron (NM_145434, intron 1 of 7) intron (NM_145434, intron 1 of 7) 1032 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding common_peak2_184_1097_0.527226899084532_10.3642757885475_19.4728091062777 chr4 103214218 103215983 + 19.4728091062777 NA promoter-TSS (NM_177732) promoter-TSS (NM_177732) -216 NM_177732 242585 Mm.281800 NM_177732 ENSMUSG00000028521 Slc35d1 AI834976|C330011J09|UGTREL7|mKIAA0260 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 protein-coding common_peak1_34_441_-1.1064568448679_8.23467413695748_19.4631600415181 chr9 21309140 21309865 + 19.4631600415181 NA intron (NM_009678, intron 2 of 10) intron (NM_009678, intron 2 of 10) 2831 NM_009678 11768 Mm.22239 NM_009678 ENSMUSG00000003309 Ap1m2 D9Ertd818e|[m]1B|mu1B adaptor protein complex AP-1, mu 2 subunit protein-coding common_peak1_180_1063_0.533924879975173_10.3222448754888_19.4627535084344 chr1 191223772 191225215 + 19.4627535084344 NA Intergenic CpG -41160 NM_007498 11910 Mm.2706 NM_007498 ENSMUSG00000026628 Atf3 LRG-21 activating transcription factor 3 protein-coding common_peak1_72_850_-0.750696295300335_9.3576671740358_19.4598134900131 chr2 22811161 22811936 + 19.4598134900131 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 37221 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak2_353_2765_0.342687791230968_11.604929336766_19.4557872272617 chr7 141094845 141098454 + 19.4557872272617 NA intron (NM_023059, intron 1 of 9) intron (NM_023059, intron 1 of 9) 3897 NM_023059 24058 Mm.38017 NM_023059 ENSMUSG00000025494 Sigirr AI256711|TIR8 single immunoglobulin and toll-interleukin 1 receptor (TIR) domain protein-coding common_peak1_39_78_1.61396579064003_7.11076364349712_19.4493331228899 chr18 74281177 74281822 + 19.4493331228899 NA intron (NM_013594, intron 14 of 14) intron (NM_013594, intron 14 of 14) -1601 NR_029424 74453 Mm.182293 NM_028948 ENSMUSG00000035394 Cfap53 4933415I03Rik|Ccdc11 cilia and flagella associated protein 53 protein-coding common_peak2_413_3428_0.309769958650799_11.898457168261_19.4472256970301 chr1 161784021 161789902 + 19.4472256970301 NA intron (NM_001205243, intron 1 of 2) intron (NM_001205243, intron 1 of 2) 1534 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_242_2880_-0.381877346013706_11.301415272153_19.4462454920241 chr2 167995607 167998655 + 19.4462454920241 NA intron (NM_001080708, intron 4 of 21) intron (NM_001080708, intron 4 of 21) 13462 NM_001080708 69553 Mm.68454 NM_001080708 ENSMUSG00000074577 Fam65c 2310033K02Rik|Gm124 family with sequence similarity 65, member C protein-coding common_peak1_138_1602_-0.524573929361946_10.3842717454736_19.4447012403042 chr6 87913483 87915087 + 19.4447012403042 NA TTS (NM_017477) TTS (NM_017477) 309 NM_173737 232210 Mm.246241 NM_173737 ENSMUSG00000030060 Hmces 8430410A17Rik|C85376 5-hydroxymethylcytosine (hmC) binding, ES cell specific protein-coding common_peak2_617_5885_0.239222884175984_12.6426832690284_19.443165001806 chr19 4184090 4193722 + 19.443165001806 NA intron (NM_178650, intron 6 of 9) intron (NM_178650, intron 6 of 9) 2141 NM_178650 108995 Mm.288312 NM_178650 ENSMUSG00000040247 Tbc1d10c 1810062O14Rik|AI428527 TBC1 domain family, member 10c protein-coding common_peak2_413_5160_-0.280092767697617_12.1933885314352_19.4403458534692 chr3 96218734 96222580 + 19.4403458534692 NA promoter-TSS (NM_178214) promoter-TSS (NM_178214) 223 NM_175662 319176 Mm.358954 NM_175662 ENSMUSG00000068855 Hist2h2ac H2a-613b histone cluster 2, H2ac protein-coding common_peak1_112_517_0.738711210485846_9.38616389292948_19.4384681718638 chr19 36347782 36349505 + 19.4384681718638 NA Intergenic CpG -30424 NM_029508 76073 Mm.259180 NM_029508 ENSMUSG00000024805 Pcgf5 0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127 polycomb group ring finger 5 protein-coding common_peak1_311_2320_0.372249575822448_11.3666555952557_19.4360753900662 chr1 160043841 160046072 + 19.4360753900662 NA intron (NM_001162896, intron 1 of 2) intron (NM_001162896, intron 1 of 2) 576 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding common_peak1_47_114_1.39489772833408_7.54293891511141_19.4359324765726 chr9 48821122 48822154 + 19.4359324765726 NA intron (NM_001033324, intron 2 of 6) intron (NM_001033324, intron 2 of 6) 14307 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding common_peak1_49_124_1.34684321866065_7.63920589399241_19.4357581420119 chr13 35189164 35189913 + 19.4357581420119 NA Intergenic Intergenic 7915 NR_045616 100503727 Mm.32214 NR_045616 ENSMUSG00000102099 1700011B04Rik - RIKEN cDNA 1700011B04 gene ncRNA common_peak2_131_660_0.662038108525898_9.69952551577064_19.4311223011967 chr19 16132017 16133925 + 19.4311223011967 NA 5' UTR (NM_008139, exon 1 of 7) 5' UTR (NM_008139, exon 1 of 7) 140 NM_008139 14682 Mm.439701 NM_008139 ENSMUSG00000024639 Gnaq 1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI guanine nucleotide binding protein, alpha q polypeptide protein-coding common_peak1_85_993_-0.684762560121982_9.6147207615013_19.4309187557796 chr9 120110054 120111437 + 19.4309187557796 NA intron (NM_144793, intron 1 of 6) CpG 346 NM_144793 208638 Mm.236656 NM_144793 ENSMUSG00000032519 Slc25a38 AV019094|BC010801|appoptosin solute carrier family 25, member 38 protein-coding common_peak2_82_960_-0.698886751605402_9.55894924497105_19.4304727009095 chr3 19318361 19320680 + 19.4304727009095 NA Intergenic L1MB4|LINE|L1 -8198 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak1_26_357_-1.26160821042466_7.85301167205193_19.429353426182 chr12 73698998 73699636 + 19.429353426182 NA intron (NM_001313977, intron 7 of 14) intron (NM_001313977, intron 7 of 14) 114521 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak2_123_1427_-0.55987343692208_10.1998435455681_19.4292435367684 chr19 5365405 5367818 + 19.4292435367684 NA promoter-TSS (NM_001038231) promoter-TSS (NM_001038231) -202 NM_027236 69860 Mm.299167 NM_027236 ENSMUSG00000024841 Eif1ad 2010003J03Rik|AI131644 eukaryotic translation initiation factor 1A domain containing protein-coding common_peak1_54_653_-0.871855807112167_8.917218921942_19.4175986204923 chr6 41532188 41532771 + 19.4175986204923 NA Intergenic Intergenic 10703 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak1_206_2426_-0.418228556751055_11.0358441147756_19.4149595716125 chr5 136169598 136172717 + 19.4149595716125 NA promoter-TSS (NM_178751) promoter-TSS (NM_178751) -501 NM_178751 269717 Mm.308396 NM_178751 ENSMUSG00000039747 Orai2 A730041O15Rik|Tmem142b ORAI calcium release-activated calcium modulator 2 protein-coding common_peak2_370_2950_0.332289669276575_11.6931330400703_19.4098827175886 chr9 25150100 25152855 + 19.4098827175886 NA 5' UTR (NM_020586, exon 1 of 8) 5' UTR (NM_020586, exon 1 of 8) 304 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding common_peak2_294_2146_0.385525516061373_11.2608692338895_19.4049222807581 chr3 53462242 53464598 + 19.4049222807581 NA promoter-TSS (NM_172501) promoter-TSS (NM_172501) -162 NM_172501 212114 Mm.85744 NM_172501 ENSMUSG00000042997 Nhlrc3 4833441N19|8030451K01Rik|mKIAA4083 NHL repeat containing 3 protein-coding common_peak1_181_1072_0.531522993149881_10.3331958573315_19.4025007151291 chr8 124230998 124232612 + 19.4025007151291 NA intron (NM_139272, intron 1 of 15) CpG 411 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_32_420_-1.14035647540552_8.14749818536364_19.4012529995897 chr3 107232684 107233425 + 19.4012529995897 NA intron (NM_001256174, intron 2 of 2) intron (NM_001256174, intron 2 of 2) 2440 NM_001256174 319929 Mm.30453 NM_001256174 ENSMUSG00000094613 A630076J17Rik - RIKEN cDNA A630076J17 gene protein-coding common_peak2_101_439_0.792923374789153_9.17782140091924_19.3985154442819 chr19 37174354 37176151 + 19.3985154442819 NA intron (NM_001290827, intron 1 of 10) intron (NM_001290827, intron 1 of 10) 811 NM_001290826 208922 Mm.391176 NM_198300 ENSMUSG00000039652 Cpeb3 4831444O18Rik|CPE-BP3|mKIAA0940 cytoplasmic polyadenylation element binding protein 3 protein-coding common_peak2_539_4914_0.260562074862685_12.3932567386593_19.3977188678896 chr5 91959132 91964061 + 19.3977188678896 NA intron (NR_073442, intron 1 of 9) intron (NR_073442, intron 1 of 9) 960 NR_073442 68098 Mm.159453 NM_026557 ENSMUSG00000029397 Rchy1 ARNIP|CHIMP|Pirh2|Zfp363|Znf363 ring finger and CHY zinc finger domain containing 1 protein-coding common_peak1_145_1685_-0.510457483370097_10.464160079257_19.3964005383453 chr4 59199558 59201977 + 19.3964005383453 NA intron (NM_011673, intron 1 of 8) intron (NM_011673, intron 1 of 8) 11217 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak2_53_642_-0.879855049301996_8.88874740267695_19.396326132719 chr6 30346649 30348783 + 19.396326132719 NA Intergenic RSINE1|SINE|B4 -43177 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak1_601_5684_0.242930956926166_12.5944101122427_19.3919471216907 chr7 66226926 66232903 + 19.3919471216907 NA Intergenic Intergenic 120399 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_64_204_1.09743442082745_8.22819730991917_19.3901401585037 chr9 44734052 44735380 + 19.3901401585037 NA intron (NM_153537, intron 1 of 21) intron (NM_153537, intron 1 of 21) 482 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak1_230_1517_0.452899981510884_10.7944060661709_19.3889027602625 chr10 8516934 8519456 + 19.3889027602625 NA exon (NM_177387, exon 1 of 8) exon (NM_177387, exon 1 of 8) 630 NM_177387 338362 Mm.41163 NM_177387 ENSMUSG00000047712 Ust D930010O20Rik|UA2OST uronyl-2-sulfotransferase protein-coding common_peak1_107_1242_-0.604178391840177_9.97752138513239_19.3875715401279 chrX 167100805 167102738 + 19.3875715401279 NA Intergenic ID_B1|SINE|B4 -31401 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak1_142_1649_-0.51605996255075_10.4302203278578_19.3829293554809 chr2 165323241 165325295 + 19.3829293554809 NA intron (NM_080287, intron 1 of 20) intron (NM_080287, intron 1 of 20) 2211 NM_080287 140579 Mm.35064 NM_080287 ENSMUSG00000017670 Elmo2 1190002F24Rik|CED-12 engulfment and cell motility 2 protein-coding common_peak1_115_540_0.722403153058465_9.44068636035605_19.3792060346287 chr2 11602393 11603477 + 19.3792060346287 NA intron (NM_152824, intron 1 of 11) CpG 264 NM_152824 76938 Mm.182769 NM_152824 ENSMUSG00000037197 Rbm17 2700027J02Rik RNA binding motif protein 17 protein-coding common_peak1_28_378_-1.21739072365852_7.95735867634183_19.3770170835402 chr4 62524891 62525514 + 19.3770170835402 NA promoter-TSS (NM_177607) promoter-TSS (NM_177607) -167 NM_177607 214106 Mm.73212 NM_177607 ENSMUSG00000058046 4933430I17Rik bN189G18.7 RIKEN cDNA 4933430I17 gene protein-coding common_peak1_140_1625_-0.519845938495724_10.4071885728272_19.3767689147274 chr8 105900354 105901480 + 19.3767689147274 NA intron (NM_173432, intron 1 of 2) intron (NM_173432, intron 1 of 2) 443 NM_173432 244631 Mm.27627 NM_173432 ENSMUSG00000048310 Pskh1 AW539964|E130013P03Rik|b2b1230Clo protein serine kinase H1 protein-coding unique_peak2_22_316_-1.3698782260459_7.62339991711646_19.3707205203219 chr16 36769056 36770927 + 19.3707205203219 NA intron (NM_021301, intron 7 of 21) IAPLTR1_Mm|LTR|ERVK 14971 NM_001145899 57738 Mm.281804 NM_021301 ENSMUSG00000022899 Slc15a2 8430408C16Rik|C78862|Pept2 solute carrier family 15 (H+/peptide transporter), member 2 protein-coding unique_peak2_30_399_-1.17717398504042_8.05526919725452_19.3704105713994 chr3 89176738 89178416 + 19.3704105713994 NA TTS (NM_001163432) TTS (NM_001163432) 186 NM_001309909 24045 Mm.257052 NM_011886 ENSMUSG00000028049 Scamp3 Sc3 secretory carrier membrane protein 3 protein-coding common_peak1_41_87_1.54465533634756_7.23175928681108_19.3702319334297 chr14 27411617 27412302 + 19.3702319334297 NA Intergenic MLTR11A|LTR|ERVK -16888 NM_028945 218850 Mm.247767 NM_028945 ENSMUSG00000040651 Fam208a 4732418E12|4933409E02Rik|D14Abb1e|MommeD6 family with sequence similarity 208, member A protein-coding common_peak2_402_3306_0.314379789618025_11.8484972250001_19.35543175581 chr11 109648783 109652483 + 19.35543175581 NA promoter-TSS (NM_021880) promoter-TSS (NM_021880) -288 NM_021880 19084 Mm.30039 NM_021880 ENSMUSG00000020612 Prkar1a 1300018C22Rik|RIalpha|Tse-1|Tse1 protein kinase, cAMP dependent regulatory, type I, alpha protein-coding common_peak1_123_1426_-0.558862792368744_10.1993382232914_19.3533379460456 chr16 43664319 43665782 + 19.3533379460456 NA promoter-TSS (NM_001146325) promoter-TSS (NM_001146325) -866 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak2_93_385_0.837286361344296_9.01110021794023_19.3524297334269 chr17 12118464 12120174 + 19.3524297334269 NA promoter-TSS (NM_026644) promoter-TSS (NM_026644) 35 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein-coding common_peak1_20_295_-1.43197872183045_7.49346400471372_19.3495839185985 chr2 128943601 128944044 + 19.3495839185985 NA intron (NM_020594, intron 1 of 8) CpG 198 NM_020594 57432 Mm.11675 NM_020594 ENSMUSG00000027387 Zc3h8 AU020882|E130108N08Rik|Fliz1|Zc3hdc8 zinc finger CCCH type containing 8 protein-coding unique_peak1_28_36_2.13920994888362_6.27905834007076_19.3477064727321 chr10 44700009 44700766 + 19.3477064727321 NA Intergenic Intergenic -241639 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding common_peak2_470_4088_0.284077803032568_12.1395712490426_19.3445501569816 chr18 80594462 80603289 + 19.3445501569816 NA Intergenic L1MEc|LINE|L1 -54329 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_82_959_-0.69738472644017_9.55819823238843_19.3381495182324 chr16 55933621 55934887 + 19.3381495182324 NA intron (NM_001159364, intron 1 of 3) CpG 594 NM_001159364 74201 Mm.178427 NM_028815 ENSMUSG00000022604 Cep97 2810403B08Rik|4932439K18Rik|AA437768|E130116N02Rik|Lrriq2 centrosomal protein 97 protein-coding common_peak2_348_2713_0.344895291845413_11.5786526513416_19.3380107353318 chr7 125551155 125556504 + 19.3380107353318 NA intron (NM_001008700, intron 1 of 10) intron (NM_001008700, intron 1 of 10) 1547 NM_001008700 16190 Mm.233802 NM_010557 ENSMUSG00000030748 Il4ra CD124|Il4r interleukin 4 receptor, alpha protein-coding common_peak2_322_2437_0.362614035371106_11.4327894283058_19.3379021625228 chr11 75335434 75339212 + 19.3379021625228 NA intron (NM_026653, intron 4 of 16) intron (NM_026653, intron 4 of 16) 11060 NM_001164223 68275 Mm.102574 NM_026653 ENSMUSG00000000751 Rpa1 5031405K23Rik|70kDa|AA589576|AW557552|RF-A|RP-A|Rpa replication protein A1 protein-coding common_peak2_134_684_0.650352975870026_9.7451366657829_19.3326534099879 chr1 91297578 91299571 + 19.3326534099879 NA intron (NM_016717, intron 1 of 11) CpG 236 NM_016717 50880 Mm.25724 NM_016717 ENSMUSG00000026307 Scly 9830169H08|A930015N15Rik|SCL|Scly1|Scly2 selenocysteine lyase protein-coding common_peak2_173_1004_0.546430355785917_10.2461949639593_19.3258675465015 chr1 144300151 144303666 + 19.3258675465015 NA Intergenic Intergenic -52804 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak1_196_1205_0.503092424725216_10.4875604042627_19.325472855272 chr12 31654283 31655489 + 19.325472855272 NA promoter-TSS (NM_028002) promoter-TSS (NM_028002) 17 NM_001163126 238123 Mm.173068 NM_001163126 ENSMUSG00000035933 Cog5 5430405C01Rik|C87247|D18362|GOLTC1|GTC90 component of oligomeric golgi complex 5 protein-coding common_peak1_30_43_2.00725058609701_6.4630569116858_19.3250509968164 chr1 161762927 161763584 + 19.3250509968164 NA Intergenic Intergenic 25240 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_127_630_0.674594001701687_9.63879319583339_19.3246677035029 chr14 54617202 54618534 + 19.3246677035029 NA exon (NM_011186, exon 1 of 3) exon (NM_011186, exon 1 of 3) 127 NM_011186 19173 Mm.8911 NM_011186 ENSMUSG00000022193 Psmb5 - proteasome (prosome, macropain) subunit, beta type 5 protein-coding common_peak1_72_251_1.00503910288571_8.47979947494277_19.3234215444216 chr6 106799247 106800236 + 19.3234215444216 NA intron (NM_175357, intron 1 of 10) intron (NM_175357, intron 1 of 10) 346 NM_021449 58799 Mm.290085 NM_021449 ENSMUSG00000005362 Crbn 2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL cereblon protein-coding common_peak2_162_911_0.570954429756629_10.1183672290431_19.3150406777321 chr4 132883160 132885237 + 19.3150406777321 NA intron (NM_133887, intron 1 of 8) CpG 260 NM_133887 100226 Mm.28237 NM_133887 ENSMUSG00000028879 Stx12 AI850350|AU041521|Stx13 syntaxin 12 protein-coding common_peak2_222_1443_0.462628847067233_10.7271694504208_19.3077757727406 chr1 51933621 51936002 + 19.3077757727406 NA Intergenic Intergenic -18833 NM_001161817 17912 Mm.3390 NM_010863 ENSMUSG00000018417 Myo1b AA406997|MIH-L|MMIa myosin IB protein-coding common_peak1_79_294_0.939787705754284_8.67446499712635_19.3063733909555 chr15 74708924 74709855 + 19.3063733909555 NA promoter-TSS (NM_008415) promoter-TSS (NM_008415) -67 NM_008415 16469 Mm.87052 NM_008415 ENSMUSG00000046380 Jrk - jerky protein-coding common_peak2_54_652_-0.869648163160516_8.91611509996617_19.3060944568434 chr5 124632020 124634236 + 19.3060944568434 NA intron (NM_011596, intron 2 of 19) B1_Mus1|SINE|Alu 4076 NM_011596 21871 Mm.1158 NM_011596 ENSMUSG00000038023 Atp6v0a2 8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2 ATPase, H+ transporting, lysosomal V0 subunit A2 protein-coding common_peak1_140_1624_-0.518958399223877_10.4067448031912_19.3056921961542 chr15 38281698 38283411 + 19.3056921961542 NA Intergenic Intergenic 18157 NM_013692 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding unique_peak2_35_450_-1.08568595019636_8.2741406481572_19.303731831938 chrX 101127824 101129479 + 19.303731831938 NA intron (NM_001110311, intron 4 of 5) intron (NM_001110311, intron 4 of 5) -43246 NM_007515 11989 Mm.5140 NM_007515 ENSMUSG00000031297 Slc7a3 Atrc3|CAT-3|CAT3|SLC7A1|SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 protein-coding common_peak1_29_388_-1.19496991238849_8.00614138879195_19.2969107338556 chr15 84685031 84685605 + 19.2969107338556 NA intron (NM_146061, intron 1 of 7) intron (NM_146061, intron 1 of 7) 4320 NM_146061 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding common_peak2_246_1671_0.43200998639084_10.9233641252763_19.2953104733451 chr1 161249745 161252514 + 19.2953104733451 NA promoter-TSS (NR_130150) promoter-TSS (NR_130150) 81 NR_130150 11758 Mm.186185 NM_007453 ENSMUSG00000026701 Prdx6 1-Cys Prx|1-cysPrx|9430088D19Rik|AA690119|Aop2|Brp-12|CP-3|GPx|Ltw-4|Ltw4|Lvtw-4|NSGPx|ORF06|Prdx5|aiPLA2 peroxiredoxin 6 protein-coding common_peak2_39_493_-1.03062069276755_8.43305688520091_19.2937323527456 chr4 62524453 62525588 + 19.2937323527456 NA promoter-TSS (NM_177607) promoter-TSS (NM_177607) -6 NM_021498 59001 Mm.27444 NM_021498 ENSMUSG00000028394 Pole3 1810034K18Rik|YBL1 polymerase (DNA directed), epsilon 3 (p17 subunit) protein-coding common_peak1_61_728_-0.816480488406274_9.1015347601238_19.2923797428486 chr3 95042053 95043039 + 19.2923797428486 NA promoter-TSS (NM_008951) promoter-TSS (NM_008951) 68 NM_001282017 19185 Mm.2261 NM_008951 ENSMUSG00000005625 Psmd4 Af1|Mcb1|angiocidin proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 protein-coding common_peak2_113_526_0.729451879099317_9.40638509118687_19.2832675230397 chr7 92636566 92638009 + 19.2832675230397 NA promoter-TSS (NM_028665) promoter-TSS (NM_028665) -145 NM_028665 73845 Mm.73248 NM_028665 ENSMUSG00000041343 Ankrd42 4931426M20|4933417L02Rik|Ikbn ankyrin repeat domain 42 protein-coding common_peak2_250_1710_0.427173436324585_10.9542107626517_19.2794037226374 chr13 63430482 63432729 + 19.2794037226374 NA 5' UTR (NM_001042673, exon 1 of 16) 5' UTR (NM_001042673, exon 1 of 16) 140 NM_007985 14088 Mm.126106 NM_007985 ENSMUSG00000021461 Fancc Facc Fanconi anemia, complementation group C protein-coding common_peak2_222_2624_-0.399617833486444_11.1582927906976_19.2781426969608 chr10 128523697 128527134 + 19.2781426969608 NA intron (NM_011843, intron 1 of 30) CpG 444 NM_011843 23943 Mm.66056 NM_011843 ENSMUSG00000025366 Esyt1 Fam62a|Mbc2|vp115 extended synaptotagmin-like protein 1 protein-coding common_peak2_88_352_0.869493995493007_8.89827137101769_19.2778963199825 chr9 115582715 115584621 + 19.2778963199825 NA Intergenic MTEa|LTR|ERVL-MaLR 201849 NR_130329 100316675 NR_130329 ENSMUSG00000080409 Mir467h Mirn467h|mmu-mir-467h microRNA 467h ncRNA common_peak2_70_826_-0.758583973324258_9.31245153250915_19.2656605259885 chr10 86684608 86686289 + 19.2656605259885 NA promoter-TSS (NR_015572) promoter-TSS (NR_015572) -79 NR_015572 66263 Mm.392261 NR_015572 1810014B01Rik - RIKEN cDNA 1810014B01 gene pseudo unique_peak2_43_535_-0.979679136577465_8.57624962216904_19.2573092544453 chr4 150555682 150558200 + 19.2573092544453 NA intron (NM_001085492, intron 11 of 22) intron (NM_001085492, intron 11 of 22) 95233 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_339_2618_0.350066125874609_11.5298334072879_19.2474566889031 chr17 33563946 33567723 + 19.2474566889031 NA intron (NM_053214, intron 1 of 27) B3A|SINE|B2 10127 NM_053214 17916 Mm.42019 NM_053214 ENSMUSG00000024300 Myo1f C330006B10Rik myosin IF protein-coding common_peak1_217_1397_0.469205901340557_10.6837515960457_19.2469947991656 chr11 117348317 117350943 + 19.2469947991656 NA intron (NM_001113488, intron 1 of 9) intron (NM_001113488, intron 1 of 9) 17317 NM_001113488 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_376_4646_-0.294415699923324_12.0348760795491_19.241053181457 chrX 18161553 18164182 + 19.241053181457 NA 5' UTR (NM_009483, exon 1 of 29) 5' UTR (NM_009483, exon 1 of 29) 292 NM_001310444 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak2_21_304_-1.3928676897563_7.5562315875721_19.2396223748017 chr8 71542808 71543626 + 19.2396223748017 NA exon (NM_028617, exon 2 of 9) exon (NM_028617, exon 2 of 9) 287 NM_028617 73711 Mm.307770 NM_028617 ENSMUSG00000031813 Mvb12a 1110012M11Rik|Fam125a multivesicular body subunit 12A protein-coding common_peak1_101_1171_-0.620473766108436_9.88451997136803_19.2356500674591 chr1 80745556 80747221 + 19.2356500674591 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 12165 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak2_296_2169_0.382109652635606_11.2745341536496_19.2280251758646 chr17 51829468 51834654 + 19.2280251758646 NA intron (NM_001163632, intron 1 of 10) CpG 586 NM_009122 20230 Mm.311655 NM_009122 ENSMUSG00000023927 Satb1 2610306G12Rik|AW413156 special AT-rich sequence binding protein 1 protein-coding common_peak2_67_793_-0.776234313796074_9.24487804024492_19.2192710143643 chrX 50840636 50842452 + 19.2192710143643 NA 5' UTR (NM_133729, exon 1 of 12) 5' UTR (NM_133729, exon 1 of 12) 173 NM_001313744 70415 Mm.46254 NM_133729 ENSMUSG00000031112 Stk26 2610018G03Rik|Mst4 serine/threonine kinase 26 protein-coding common_peak1_263_1838_0.412451116808011_11.0509313228159_19.2173870516444 chr2 180275571 180278005 + 19.2173870516444 NA TTS (NM_173031) TTS (NM_173031) -3323 NM_145851 252966 Mm.386884 NM_145851 ENSMUSG00000038990 Cables2 ik3-2 CDK5 and Abl enzyme substrate 2 protein-coding common_peak1_121_586_0.693915069123276_9.54417422767169_19.2116240382681 chr6 42352945 42355291 + 19.2116240382681 NA intron (NM_011777, intron 5 of 9) intron (NM_011777, intron 5 of 9) 4290 NM_001289619 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak1_125_616_0.679094791988721_9.60867407514378_19.2069232137282 chr2 68861288 68862391 + 19.2069232137282 NA intron (NM_172856, intron 1 of 9) CpG 282 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_333_2555_0.35368679592732_11.4965155189107_19.2062154296461 chr9 78479368 78482627 + 19.2062154296461 NA intron (NM_010106, intron 1 of 7) CpG 727 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak1_121_1401_-0.562138871777295_10.172201198122_19.204871288726 chr14 20785538 20787552 + 19.204871288726 NA intron (NM_178597, intron 2 of 20) intron (NM_178597, intron 2 of 20) 7543 NM_001039138 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding common_peak2_198_1225_0.497238530156636_10.5083625287691_19.2023360683124 chr14 52196037 52198138 + 19.2023360683124 NA exon (NM_033618, exon 1 of 26) exon (NM_033618, exon 1 of 26) 152 NM_033618 114741 Mm.21662 NM_033618 ENSMUSG00000035726 Supt16 Cdc68|Fact140|Spt16|Supt16h suppressor of Ty 16 protein-coding common_peak2_231_1529_0.449184310491621_10.8039080928258_19.1987414111586 chr12 102671632 102675816 + 19.1987414111586 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 11296 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_624_5980_0.236055363625674_12.6641986840802_19.1973527340014 chr11 120347359 120351169 + 19.1973527340014 NA promoter-TSS (NM_001313923) promoter-TSS (NM_001313923) 586 NR_038126 66838 Mm.375010 NR_038126 ENSMUSG00000043644 0610009L18Rik - RIKEN cDNA 0610009L18 gene ncRNA common_peak1_54_651_-0.867437135845162_8.9150095863085_19.19482596852 chr11 95310482 95311158 + 19.19482596852 NA promoter-TSS (NM_177619) promoter-TSS (NM_177619) -574 NM_001195003 217127 Mm.90213 NM_177619 ENSMUSG00000038909 Kat7 Hbo1|Hboa|Myst2 K(lysine) acetyltransferase 7 protein-coding common_peak1_154_1789_-0.490956080538991_10.5602658318821_19.1934060420847 chr9 21320227 21322574 + 19.1934060420847 NA intron (NM_001199186, intron 1 of 21) intron (NM_001199186, intron 1 of 21) 681 NM_001199186 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding common_peak2_34_439_-1.09991399900113_8.2314027140241_19.1933145262699 chr2 30170945 30172313 + 19.1933145262699 NA exon (NM_007931, exon 1 of 3) exon (NM_007931, exon 1 of 3) 105 NM_007931 13804 Mm.474473 NM_007931 ENSMUSG00000015337 Endog - endonuclease G protein-coding common_peak1_64_205_1.09041399314968_8.23170752375806_19.1933145262699 chr1 79671331 79672452 + 19.1933145262699 NA promoter-TSS (NM_183027) promoter-TSS (NM_183027) 81 NM_183027 252903 Mm.32409 NM_183027 ENSMUSG00000054702 Ap1s3 1190009B22|Jr2|[s]3A adaptor-related protein complex AP-1, sigma 3 protein-coding common_peak2_64_760_-0.794838123170649_9.17433358191822_19.1920487809507 chr5 64496161 64499588 + 19.1920487809507 NA Intergenic Intergenic 20866 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA common_peak1_274_1947_0.401618643181894_11.1285872836733_19.1879625781369 chr7 66144827 66147434 + 19.1879625781369 NA intron (NM_001081163, intron 2 of 2) intron (NM_001081163, intron 2 of 2) 36615 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_61_188_1.13105209169959_8.12776847007087_19.1838165337942 chr6 50436832 50438069 + 19.1838165337942 NA intron (NM_001163645, intron 1 of 21) ORR1F|LTR|ERVL-MaLR 18720 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_206_2422_-0.415848853051267_11.0346542629257_19.1821726860296 chr16 94312144 94314115 + 19.1821726860296 NA Intergenic Intergenic -15293 NM_133229 170765 Mm.42604 NM_133229 ENSMUSG00000022941 Ripply3 Dscr6 ripply transcriptional repressor 3 protein-coding common_peak2_200_1243_0.493907446172402_10.5277244932168_19.1767302782612 chr14 65097040 65098709 + 19.1767302782612 NA intron (NM_018788, intron 1 of 6) CpG 232 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding unique_peak2_27_366_-1.23307150282529_7.90310050143057_19.1761997627316 chrX 20266296 20268650 + 19.1761997627316 NA intron (NM_177353, intron 1 of 16) L1ME1|LINE|L1 24291 NM_177353 236727 Mm.132983 NM_177353 ENSMUSG00000037341 Slc9a7 A530087D17Rik|NHE7 solute carrier family 9 (sodium/hydrogen exchanger), member 7 protein-coding common_peak1_63_748_-0.79934402296087_9.14914989697832_19.1750438382976 chr11 49983457 49984156 + 19.1750438382976 NA Intergenic L1M4b|LINE|L1 -41525 NM_021540 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak2_169_971_0.553441655433067_10.2015333313223_19.1699676498287 chr10 18054959 18056950 + 19.1699676498287 NA promoter-TSS (NM_001111065) promoter-TSS (NM_001111065) 14 NM_001111065 19707 Mm.4479 NM_009048 ENSMUSG00000019854 Reps1 BB161292 RalBP1 associated Eps domain containing protein protein-coding common_peak1_39_492_-1.02769729756078_8.43159518759752_19.1662879634363 chr14 20784724 20785307 + 19.1662879634363 NA intron (NM_178597, intron 2 of 20) intron (NM_178597, intron 2 of 20) 9073 NM_001039138 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding common_peak1_25_27_2.34806632258333_5.98138808334927_19.1596876140306 chrX 169879684 169880353 + 19.1596876140306 NA intron (NM_001290505, intron 1 of 9) intron (NM_001290505, intron 1 of 9) 399 NM_001290505 17318 Mm.34441 NM_010797 ENSMUSG00000035299 Mid1 61B3-R|DXHXS1141|Fxy|Trim18 midline 1 protein-coding common_peak1_57_166_1.19157133322487_7.97948995908649_19.1557284665353 chr10 94035283 94035819 + 19.1557284665353 NA promoter-TSS (NM_053072) promoter-TSS (NM_053072) 191 NM_001304720 215008 Mm.124177 NM_172538 ENSMUSG00000036099 Vezt A630071D13Rik|AI848282 vezatin, adherens junctions transmembrane protein protein-coding unique_peak2_29_387_-1.19125640958942_8.00428463739241_19.1538539653599 chr4 40264212 40266218 + 19.1538539653599 NA intron (NM_134097, intron 2 of 2) Lx8|LINE|L1 -4364 NR_045265 100504309 Mm.392019 NR_045265 Toporsos 2010003O02Rik topoisomerase I binding, arginine/serine-rich, opposite strand ncRNA common_peak1_70_240_1.02027020961706_8.42302444103849_19.1462588131383 chr17 49428305 49429179 + 19.1462588131383 NA intron (NM_020042, intron 1 of 10) intron (NM_020042, intron 1 of 10) 378 NM_020042 56738 Mm.22256 NM_020042 ENSMUSG00000064120 Mocs1 3110045D15Rik|AI043170|AW536397 molybdenum cofactor synthesis 1 protein-coding common_peak2_107_1239_-0.600692216061931_9.97577829724327_19.14434406351 chr5 76950205 76952569 + 19.14434406351 NA promoter-TSS (NM_025939) promoter-TSS (NM_025939) -24 NM_025939 67054 Mm.182931 NM_025939 ENSMUSG00000029247 Paics 2610511I09Rik|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase protein-coding common_peak1_149_805_0.602125990948057_9.955699024002_19.1442979126162 chr4 135971647 135973229 + 19.1442979126162 NA intron (NM_011942, intron 1 of 9) CpG 156 NM_011942 26394 Mm.34302 NM_011942 ENSMUSG00000028670 Lypla2 LysoII lysophospholipase 2 protein-coding common_peak2_133_1539_-0.531558624246184_10.3229353234592_19.1415952558471 chr1 125440329 125442402 + 19.1415952558471 NA Intergenic Intergenic -5638 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak2_136_1575_-0.525714262921516_10.3591946879956_19.1413901207972 chr1 63175850 63177844 + 19.1413901207972 NA promoter-TSS (NM_018796) promoter-TSS (NM_018796) 16 NM_018796 55949 Mm.2718 NM_018796 ENSMUSG00000025967 Eef1b2 2810017J07Rik|Eef1b eukaryotic translation elongation factor 1 beta 2 protein-coding common_peak1_136_1575_-0.525714262921516_10.3591946879956_19.1413901207972 chr6 34780260 34781502 + 19.1413901207972 NA 5' UTR (NM_001289657, exon 1 of 19) 5' UTR (NM_001289657, exon 1 of 19) 449 NM_001289656 76223 Mm.150047 NM_178630 ENSMUSG00000038836 Agbl3 2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3 ATP/GTP binding protein-like 3 protein-coding unique_peak2_56_672_-0.849963975060144_8.96948070708024_19.1403977041444 chr5 124635595 124638537 + 19.1403977041444 NA intron (NM_011596, intron 3 of 19) intron (NM_011596, intron 3 of 19) 8014 NM_011596 21871 Mm.1158 NM_011596 ENSMUSG00000038023 Atp6v0a2 8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2 ATPase, H+ transporting, lysosomal V0 subunit A2 protein-coding common_peak2_91_373_0.844790966578586_8.96928994317693_19.1403977041442 chr12 83921319 83922769 + 19.1403977041442 NA promoter-TSS (NR_073564) promoter-TSS (NR_073564) -110 NR_073564 18222 Mm.4390 NM_010949 ENSMUSG00000021224 Numb Nb numb homolog (Drosophila) protein-coding common_peak1_73_857_-0.738437875101779_9.37561489994865_19.1344110863128 chr19 5662697 5663710 + 19.1344110863128 NA intron (NM_001164481, intron 1 of 17) intron (NM_001164481, intron 1 of 17) 504 NM_001164482 20469 Mm.3072 NM_011379 ENSMUSG00000056917 Sipa1 Spa1 signal-induced proliferation associated gene 1 protein-coding common_peak2_119_1377_-0.566479117733875_10.1451206138374_19.1342119671804 chr6 57534335 57536634 + 19.1342119671804 NA promoter-TSS (NM_175523) promoter-TSS (NM_175523) -58 NM_175523 243382 Mm.396893 NM_175523 ENSMUSG00000037826 Ppm1k 2900063A19Rik|A930026L03Rik|PP2Cm protein phosphatase 1K (PP2C domain containing) protein-coding unique_peak2_32_418_-1.13348648603847_8.14406319068012_19.125425067888 chr13 23430700 23433378 + 19.125425067888 NA Intergenic Intergenic -1022 NR_015492 320842 Mm.487476 NR_015492 ENSMUSG00000085024 C230035I16Rik - RIKEN cDNA C230035I16 gene ncRNA common_peak2_198_1226_0.496062260184512_10.5089506637552_19.1209014862505 chr10 71237052 71240324 + 19.1209014862505 NA promoter-TSS (NM_009360) promoter-TSS (NM_009360) -644 NM_009360 21780 Mm.229292 NM_009360 ENSMUSG00000003923 Tfam AI661103|Hmgts|mtTFA|tsHMG transcription factor A, mitochondrial protein-coding common_peak2_137_710_0.635501881813735_9.79145669052628_19.1181346192634 chr10 67716395 67718831 + 19.1181346192634 NA Intergenic Intergenic -168658 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_78_912_-0.712371958870905_9.47828507054877_19.1157118774482 chr9 106170895 106171664 + 19.1157118774482 NA exon (NM_029896, exon 1 of 9) exon (NM_029896, exon 1 of 9) 350 NM_029896 77305 Mm.265125 NM_029896 ENSMUSG00000020257 Wdr82 9430077D24Rik|CDW5/WDR82 WD repeat domain containing 82 protein-coding common_peak2_78_912_-0.712371958870905_9.47828507054877_19.1157118774482 chr10 8054576 8057011 + 19.1157118774482 NA Intergenic Intergenic -99670 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak2_253_1741_0.422294096761535_10.9776759569796_19.1062874466053 chr14 37134048 37136213 + 19.1062874466053 NA promoter-TSS (NM_001199122) promoter-TSS (NM_001199122) 9 NM_001199122 66092 Mm.182912 NM_078478 ENSMUSG00000041028 Ghitm 1010001P14Rik|C77840|MICS1|PTD010|Tmbim5 growth hormone inducible transmembrane protein protein-coding common_peak1_45_106_1.42360612887872_7.45327005084051_19.1040720747874 chr7 49090686 49091664 + 19.1040720747874 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 132102 NM_001111016 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_92_380_0.837169533394269_8.99223195419045_19.1007830028204 chr9 70760516 70761931 + 19.1007830028204 NA intron (NM_007399, intron 9 of 15) intron (NM_007399, intron 9 of 15) 82222 NM_007399 11487 Mm.3037 NM_007399 ENSMUSG00000054693 Adam10 1700031C13Rik|MADM|kuz|kuzbanian a disintegrin and metallopeptidase domain 10 protein-coding common_peak1_151_1752_-0.495409143803581_10.5279057088577_19.0959367299187 chr9 63738624 63740762 + 19.0959367299187 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 18301 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_99_1147_-0.625667112166592_9.85207337059239_19.0945751291704 chr15 75920871 75922316 + 19.0945751291704 NA promoter-TSS (NM_025412) promoter-TSS (NM_025412) -33 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik pyrroline-5-carboxylate reductase-like protein-coding common_peak1_38_480_-1.03694963416218_8.39141826668895_19.0882282658135 chr11 108243796 108244480 + 19.0882282658135 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 99750 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding unique_peak2_30_397_-1.16994241580934_8.05165341263898_19.087920601349 chr4 11492055 11493754 + 19.087920601349 NA intron (NM_001081183, intron 1 of 24) intron (NM_001081183, intron 1 of 24) 6946 NM_001081183 66185 Mm.331487 NM_001081183 ENSMUSG00000040720 1110037F02Rik 4930422M05Rik|Kiaa1429|mKIAA1429 RIKEN cDNA 1110037F02 gene protein-coding common_peak2_164_930_0.562788176980407_10.144031446049_19.0740291172733 chr11 114882190 114885431 + 19.0740291172733 NA Intergenic Intergenic -6231 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding common_peak1_133_1538_-0.53062150499213_10.3224667638321_19.0690253465868 chr15 81465446 81467275 + 19.0690253465868 NA promoter-TSS (NM_019712) promoter-TSS (NM_019712) 44 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak1_18_272_-1.49239293752296_7.34656067215837_19.0679694041077 chr1 86434089 86434497 + 19.0679694041077 NA Intergenic Intergenic 7964 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 1700019O17Rik - RIKEN cDNA 1700019O17 gene protein-coding common_peak2_152_831_0.591365575139648_9.99612250571092_19.0659988231281 chr10 59906630 59908828 + 19.0659988231281 NA Intergenic Intergenic 28138 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_57_682_-0.840466142591165_8.99550869699451_19.0644144463411 chr7 27195703 27196316 + 19.0644144463411 NA promoter-TSS (NM_001046637) promoter-TSS (NM_001046637) 228 NM_001243888 414069 Mm.379069 NM_001243888 ENSMUSG00000078786 BC024978 - cDNA sequence BC024978 protein-coding common_peak1_83_321_0.899782388056593_8.78080807214291_19.0604498620186 chr9 66275050 66276199 + 19.0604498620186 NA Intergenic Intergenic -74826 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak2_498_4426_0.271688944311574_12.2479581302537_19.0590049054314 chr1 165703881 165712428 + 19.0590049054314 NA promoter-TSS (NM_001038846) promoter-TSS (NM_001038846) -60 NM_001038846 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding unique_peak2_34_438_-1.09663141501182_8.22976142202945_19.0588635345544 chr3 137953295 137955599 + 19.0588635345544 NA intron (NM_001310753, intron 2 of 7) intron (NM_001310753, intron 2 of 7) 27102 NM_011932 26377 Mm.254835 NM_011932 ENSMUSG00000028159 Dapp1 Bam32 dual adaptor for phosphotyrosine and 3-phosphoinositides 1 protein-coding common_peak2_98_421_0.800355275106979_9.12127682626068_19.0564053552315 chr11 118210706 118212852 + 19.0564053552315 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 963 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_297_3584_-0.33622009029529_11.6396473584416_19.053984116648 chr11 69578927 69582125 + 19.053984116648 NA intron (NM_001127233, intron 1 of 10) intron (NM_001127233, intron 1 of 10) 167 NM_001127233 22059 Mm.222 NM_011640 ENSMUSG00000059552 Trp53 Tp53|bbl|bfy|bhy|p44|p53 transformation related protein 53 protein-coding common_peak2_207_1308_0.481008796254759_10.5947537800726_19.0446174542441 chr11 3288644 3292752 + 19.0446174542441 NA exon (NM_001253691, exon 1 of 5) exon (NM_001253691, exon 1 of 5) 241 NM_019574 56218 Mm.275563 NM_019574 ENSMUSG00000020453 Patz1 8430401L15Rik|AI447519|Mazr|Patz|Zfp278 POZ (BTB) and AT hook containing zinc finger 1 protein-coding unique_peak1_26_30_2.26801125645272_6.08820193861323_19.0430983091344 chr11 69754323 69754849 + 19.0430983091344 NA intron (NM_001291068, intron 1 of 28) B1_Mus2|SINE|Alu 4047 NM_001291068 20020 Mm.16533 NM_009089 ENSMUSG00000005198 Polr2a 220kDa|Rpb1|Rpo2-1 polymerase (RNA) II (DNA directed) polypeptide A protein-coding common_peak1_35_448_-1.07927396168212_8.27093465390008_19.0375824643218 chr13 96523533 96524310 + 19.0375824643218 NA intron (NM_012048, intron 1 of 14) Lx7|LINE|L1 18564 NM_012048 27015 Mm.89926 NM_012048 ENSMUSG00000021668 Polk DINP|Dinb1 polymerase (DNA directed), kappa protein-coding common_peak1_89_1034_-0.6626241036357_9.68410300056884_19.037064571322 chr1 86358587 86359454 + 19.037064571322 NA promoter-TSS (NR_015507) promoter-TSS (NR_015507) 435 NM_010880 17975 Mm.154378 NM_010880 ENSMUSG00000026234 Ncl B530004O11Rik|C23|D0Nds28|D1Nds28|Nucl nucleolin protein-coding common_peak2_383_3101_0.32124174180143_11.7596038419368_19.0330928556705 chr1 171231048 171235355 + 19.0330928556705 NA intron (NM_010185, intron 1 of 4) MIR|SINE|MIR 1148 NM_010185 14127 Mm.22673 NM_010185 ENSMUSG00000058715 Fcer1g AI573376|CD23|FcR-gamma|FcR[g]|FcRgamma|Fce1g|FcepsilonRI|Ly-50 Fc receptor, IgE, high affinity I, gamma polypeptide protein-coding common_peak2_173_2015_-0.457869781647707_10.7483450326761_19.0326296582024 chr5 146220156 146222557 + 19.0326296582024 NA promoter-TSS (NM_001256087) promoter-TSS (NM_001256087) 101 NM_028774 74132 Mm.26696 NM_028774 ENSMUSG00000029634 Rnf6 1200013I08Rik|5730419H05Rik|AA537053 ring finger protein (C3H2C3 type) 6 protein-coding unique_peak1_32_51_1.87688022951979_6.63887983290099_19.0304225043938 chr3 37204020 37204717 + 19.0304225043938 NA Intergenic Intergenic 28268 NM_001291041 60505 Mm.157689 NM_021782 ENSMUSG00000027718 Il21 IL-21 interleukin 21 protein-coding unique_peak1_32_51_1.87688022951979_6.63887983290099_19.0304225043938-2 chrX 74046340 74046986 + 19.0304225043938 NA intron (NM_001081979, intron 1 of 2) intron (NM_001081979, intron 1 of 2) -22727 NR_030758 751533 NR_030758 ENSMUSG00000076127 Mir718 Mirn718|mir-718|mmu-mir-718 microRNA 718 ncRNA common_peak1_607_5769_0.239070155795824_12.6138906814308_19.0296795353521 chr1 138187472 138194247 + 19.0296795353521 NA Intergenic Intergenic -15554 NM_001268286 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak2_140_1620_-0.515402771938238_10.4049669895484_19.0224859546687 chr11 116085836 116088310 + 19.0224859546687 NA promoter-TSS (NM_016852) promoter-TSS (NM_016852) -109 NM_016852 22378 Mm.284792 NM_016852 ENSMUSG00000034341 Wbp2 - WW domain binding protein 2 protein-coding common_peak1_59_178_1.1514529665198_8.05954226052416_19.0191801426578 chr5 32610399 32611413 + 19.0191801426578 NA promoter-TSS (NM_001205133) promoter-TSS (NM_001205133) -265 NM_001205133 22612 Mm.4558 NM_009535 ENSMUSG00000014932 Yes1 Yes|p61-Yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding common_peak1_29_386_-1.18753332354671_8.00242309437106_19.0111397028178 chr17 47510476 47511040 + 19.0111397028178 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 5707 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding unique_peak2_29_386_-1.18753332354671_8.00242309437106_19.0111397028178 chr5 114115985 114117762 + 19.0111397028178 NA intron (NM_001033202, intron 7 of 12) intron (NM_001033202, intron 7 of 12) 11303 NM_175016 231642 Mm.332593 NM_175016 ENSMUSG00000044339 Alkbh2 9530023G02|AU016977|Abh2|mABH2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase protein-coding common_peak2_66_217_1.0623593753728_8.29936401246333_19.0079833138059 chr11 108214417 108215799 + 19.0079833138059 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 128780 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_440_5526_-0.267135627996909_12.2987130832157_19.0077230100246 chr11 70802692 70807189 + 19.0077230100246 NA intron (NM_001045526, intron 1 of 4) intron (NM_001045526, intron 1 of 4) 7621 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak1_87_1011_-0.669971209627647_9.64800796988049_19.0052188765486 chr16 64758070 64759547 + 19.0052188765486 NA Intergenic Intergenic 12131 NM_026273 67609 Mm.212157 NM_026273 ENSMUSG00000059920 4930453N24Rik AI649104|din RIKEN cDNA 4930453N24 gene protein-coding common_peak1_256_1772_0.417624828257987_11.0007892350277_18.9973682889425 chr17 37269676 37271040 + 18.9973682889425 NA intron (NM_013819, intron 1 of 7) intron (NM_013819, intron 1 of 7) 124 NM_013819 14991 Mm.14437 NM_013819 ENSMUSG00000016206 H2-M3 H-2M3|Hmt|M3a|MuprM3|MuprM301|MuprM302|R4B2 histocompatibility 2, M region locus 3 protein-coding common_peak2_170_982_0.547585629362878_10.214840421022_18.9962807551144 chr17 31787474 31791573 + 18.9962807551144 NA Intergenic Intergenic 66269 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak1_199_1236_0.493222340719083_10.5192409553359_18.9932267097669 chr10 79916097 79917973 + 18.9932267097669 NA promoter-TSS (NM_053244) promoter-TSS (NM_053244) 64 NM_053244 114229 Mm.191035 NM_053244 ENSMUSG00000035773 Kiss1r Gpr54|KiSS-1 KISS1 receptor protein-coding common_peak2_370_2958_0.32838389351466_11.6950859279513_18.9889200179247 chr12 100894232 100900155 + 18.9889200179247 NA intron (NM_175493, intron 1 of 2) Lx8|LINE|L1 2331 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding common_peak1_132_672_0.649437618052044_9.71918150363634_18.9865321011768 chr6 28420591 28422609 + 18.9865321011768 NA 5' UTR (NM_028900, exon 1 of 2) 5' UTR (NM_028900, exon 1 of 2) 124 NM_028900 74375 Mm.332950 NM_028900 ENSMUSG00000029708 Gcc1 4932417P04Rik golgi coiled coil 1 protein-coding common_peak2_840_8860_0.194268803994117_13.2103882086483_18.9835803486943 chr17 21471180 21480735 + 18.9835803486943 NA Intergenic MMVL30-int|LTR|ERV1 -13031 NM_013843 24132 Mm.42140 NM_013843 ENSMUSG00000057409 Zfp53 D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8 zinc finger protein 53 protein-coding unique_peak2_26_354_-1.24946764755245_7.84694139061582_18.9823300820726 chr2 168004961 168007104 + 18.9823300820726 NA intron (NM_001080708, intron 2 of 21) intron (NM_001080708, intron 2 of 21) 4561 NM_001080708 69553 Mm.68454 NM_001080708 ENSMUSG00000074577 Fam65c 2310033K02Rik|Gm124 family with sequence similarity 65, member C protein-coding common_peak1_51_618_-0.891762043386976_8.82791457752078_18.9814085257054 chr8 106682971 106683696 + 18.9814085257054 NA intron (NM_173037, intron 1 of 17) CpG 265 NM_173037 272538 Mm.87151 NM_173037 ENSMUSG00000041949 Tango6 AW413431|E330010G16|Tmco7 transport and golgi organization 6 protein-coding common_peak1_74_867_-0.731401524154812_9.39585047036707_18.9810924048647 chr12 71014776 71015720 + 18.9810924048647 NA promoter-TSS (NM_001081195) promoter-TSS (NM_001081195) 575 NR_045056 73204 Mm.363770 NR_045055 ENSMUSG00000085622 3110056K07Rik 4921536K06Rik RIKEN cDNA 3110056K07 gene ncRNA common_peak2_108_1248_-0.594815526078321_9.9891499985688_18.9785702358634 chr2 122374965 122376839 + 18.9785702358634 NA Intergenic Intergenic -6984 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding common_peak1_68_229_1.03710526930242_8.36404268559559_18.9776751726107 chr17 22739315 22740192 + 18.9776751726107 NA Intergenic Intergenic 77994 NR_030709 100042679 Mm.484007 NR_030709 Gm16386 EG545191|ENSMUSG00000073442|Gm21017 zinc finger protein 946 pseudogene pseudo common_peak1_68_801_-0.764863106208125_9.26502687335086_18.9759253635724 chr9 45291381 45292453 + 18.9759253635724 NA Intergenic Intergenic -22771 NM_008348 16154 Mm.379327 NM_008348 ENSMUSG00000032089 Il10ra AW553859|CDw210|CDw210a|IL-10R1|IL-10RA|Il10r|mIL-10R interleukin 10 receptor, alpha protein-coding common_peak1_63_200_1.09842619431895_8.2002647883384_18.962816140234 chr12 82207316 82208529 + 18.962816140234 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 37906 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak2_151_1750_-0.4937622314776_10.5270822526948_18.9600981309503 chr15 80570907 80573755 + 18.9600981309503 NA promoter-TSS (NM_001289442) promoter-TSS (NM_001289442) -266 NM_001289442 17444 Mm.12947 NM_010815 ENSMUSG00000042351 Grap2 GRAP-2|GRB2L|GRBLG|GRID|Gads|GrbX|Grf40|GrpL|Mona|P38 GRB2-related adaptor protein 2 protein-coding common_peak1_141_1631_-0.512653484938122_10.4160985995024_18.9562602008368 chr11 53793546 53794955 + 18.9562602008368 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 23777 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_395_3236_0.314237435977704_11.817560368198_18.9549350255792 chr14 70773039 70778698 + 18.9549350255792 NA intron (NM_010071, intron 2 of 4) intron (NM_010071, intron 2 of 4) 1487 NM_010071 13449 Mm.243323 NM_010071 ENSMUSG00000022102 Dok2 DokR|Frip docking protein 2 protein-coding common_peak1_110_1271_-0.588964787919659_10.0184005613245_18.9547962743747 chr18 79079509 79080731 + 18.9547962743747 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 29271 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_97_415_0.803048829955948_9.10196413311907_18.9432815308696 chr11 97279555 97280682 + 18.9432815308696 NA intron (NM_008942, intron 1 of 22) CpG 458 NM_008942 19155 Mm.29824 NM_008942 ENSMUSG00000001441 Npepps AAP-S|MP100|Psa|R74825|goku aminopeptidase puromycin sensitive protein-coding common_peak2_140_735_0.623703647522291_9.83541377981816_18.9407057090016 chr18 12223989 12226184 + 18.9407057090016 NA intron (NM_008720, intron 1 of 24) intron (NM_008720, intron 1 of 24) 11300 NM_008720 18145 Mm.3484 NM_008720 ENSMUSG00000024413 Npc1 A430089E03Rik|C85354|D18Ertd139e|D18Ertd723e|lcsd|nmf164|spm Niemann-Pick type C1 protein-coding common_peak1_49_126_1.32394281655058_7.65065609504745_18.938822179443 chr4 44300604 44301399 + 18.938822179443 NA promoter-TSS (NM_010790) promoter-TSS (NM_010790) 84 NM_010790 17279 Mm.268668 NM_010790 ENSMUSG00000035683 Melk AI327312|MPK38|mKIAA0175 maternal embryonic leucine zipper kinase protein-coding common_peak2_300_2215_0.375521113470231_11.3015027227843_18.93682496835 chr17 30575117 30577496 + 18.93682496835 NA promoter-TSS (NM_027060) promoter-TSS (NM_027060) -19 NM_027060 224671 Mm.41220 NM_027060 ENSMUSG00000062202 Btbd9 1700023F20Rik|4930402L05|AI464421 BTB (POZ) domain containing 9 protein-coding common_peak1_19_281_-1.44841712476802_7.41534279001479_18.9220682114611-2 chr8 71542866 71543416 + 18.9220682114611 NA exon (NM_028617, exon 2 of 9) exon (NM_028617, exon 2 of 9) 211 NM_028617 73711 Mm.307770 NM_028617 ENSMUSG00000031813 Mvb12a 1110012M11Rik|Fam125a multivesicular body subunit 12A protein-coding common_peak1_19_281_-1.44841712476802_7.41534279001479_18.9220682114611 chr1 52040269 52040636 + 18.9220682114611 NA intron (NM_011487, intron 3 of 23) intron (NM_011487, intron 3 of 23) 32212 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 protein-coding common_peak2_115_1328_-0.574237452390893_10.0890066630807_18.9216982591709 chr8 105263998 105266063 + 18.9216982591709 NA promoter-TSS (NM_001033161) promoter-TSS (NM_001033161) 382 NM_015821 50788 Mm.334764 NM_015821 ENSMUSG00000033313 Fbxl8 FBL8 F-box and leucine-rich repeat protein 8 protein-coding common_peak1_47_116_1.37002305969505_7.55537624943093_18.9191059246253 chr10 128636573 128637322 + 18.9191059246253 NA intron (NM_011772, intron 5 of 7) intron (NM_011772, intron 5 of 7) 9046 NM_011772 22781 Mm.358648 NM_011772 ENSMUSG00000002578 Ikzf4 A630026H08Rik|Eos|Zfpn1a4|Znfn1a4 IKAROS family zinc finger 4 protein-coding common_peak1_131_1513_-0.533604919952142_10.2973470300097_18.9113674332587 chr3 103867387 103868279 + 18.9113674332587 NA intron (NR_104070, intron 3 of 22) intron (NR_104070, intron 3 of 22) 7556 NM_008979 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding common_peak2_124_1431_-0.549694998249553_10.2089682781395_18.9091542466995 chr9 61705106 61708995 + 18.9091542466995 NA Intergenic Intergenic 207460 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding unique_peak1_19_11_3.10617172690962_5.13804836417597_18.9088501303732 chr5 65689039 65689470 + 18.9088501303732 NA intron (NM_001081321, intron 2 of 31) intron (NM_001081321, intron 2 of 31) 8602 NM_001081321 71521 Mm.278974 NM_027818 ENSMUSG00000029202 Pds5a 9030416H16Rik|E230024D05Rik|mKIAA0648 PDS5 cohesin associated factor A protein-coding common_peak1_35_447_-1.07605724899858_8.26932629755831_18.904974277646 chr6 54925230 54925959 + 18.904974277646 NA intron (NM_172729, intron 11 of 11) L2|LINE|L2 46067 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak1_221_1439_0.458677382221378_10.7211917874404_18.9043688254168 chr7 133708277 133710100 + 18.9043688254168 NA promoter-TSS (NM_025392) promoter-TSS (NM_025392) 107 NM_009479 22276 Mm.3160 NM_009479 ENSMUSG00000030979 Uros AI415298|UROIIIS|Uros3 uroporphyrinogen III synthase protein-coding common_peak1_18_271_-1.48709863785345_7.34391352232361_18.8996071789443 chr9 64960924 64961491 + 18.8996071789443 NA 5' UTR (NM_175153, exon 1 of 13) 5' UTR (NM_175153, exon 1 of 13) 277 NM_175153 69882 Mm.272616 NM_175153 ENSMUSG00000034263 Vwa9 2010321M09Rik von Willebrand factor A domain containing 9 protein-coding common_peak1_157_1820_-0.481803804677165_10.5896133046383_18.8933990217939 chr2 11202912 11205223 + 18.8933990217939 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 31685 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak2_151_1749_-0.492938069763733_10.5266701718378_18.892333454842 chr4 41772479 41775670 + 18.892333454842 NA promoter-TSS (NM_001164045) promoter-TSS (NM_001164045) 27 NM_001164045 20301 Mm.335946 NM_011336 ENSMUSG00000073888 Ccl27a ALP|AW558992|CTACK|CTAK|Ccl27|ESkine|ILC|PESKY|Scya27|Scya27a chemokine (C-C motif) ligand 27A protein-coding common_peak2_55_659_-0.853145153041535_8.93974963772505_18.890973700479 chr11 69069935 69071476 + 18.890973700479 NA promoter-TSS (NM_028336) promoter-TSS (NM_028336) -104 NM_025838 66910 Mm.33964 NM_025838 ENSMUSG00000020895 Tmem107 1110004B13Rik|2810049P21Rik transmembrane protein 107 protein-coding common_peak1_244_1657_0.429753532293255_10.9101050576424_18.8896790409091 chr5 148551044 148553175 + 18.8896790409091 NA 5' UTR (NM_011908, exon 1 of 5) 5' UTR (NM_011908, exon 1 of 5) 679 NM_011908 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG ubiquitin-like 3 protein-coding common_peak2_64_757_-0.789139517838196_9.171484279252_18.8839191133712 chr4 141957957 141960055 + 18.8839191133712 NA intron (NM_177868, intron 9 of 31) intron (NM_177868, intron 9 of 31) -23986 NR_040672 545691 Mm.332015 NR_040672 ENSMUSG00000085424 Fhad1os1 Gm13037|OTTMUSG00000010113 forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 1 ncRNA common_peak1_789_8164_0.201579818728936_13.0960270798135_18.88028178815 chr4 63402256 63406670 + 18.88028178815 NA Intergenic Intergenic -1018 NM_001045514 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak2_220_1430_0.459733219322338_10.7126745663878_18.8758473532789 chr14 34673248 34675177 + 18.8758473532789 NA 5' UTR (NM_001301330, exon 1 of 19) 5' UTR (NM_001301330, exon 1 of 19) 284 NM_001301330 218914 Mm.27957 NM_001004436 ENSMUSG00000041408 Wapl A530089A20Rik|BC037674|DIF-2|FOE|Wapal WAPL cohesin release factor protein-coding unique_peak1_14_2_4.59708162069019_3.88350331106625_18.8733136962063 chr5 24891909 24892292 + 18.8733136962063 NA intron (NM_001310480, intron 3 of 13) intron (NM_001310480, intron 3 of 13) -10469 NR_040684 71161 Mm.443533 NR_040684 ENSMUSG00000086446 Prkag2os1 4933426D04Rik protein kinase, AMP-activated, gamma 2 non-catalytic subunit, opposite strand 1 ncRNA common_peak1_70_822_-0.751589074574609_9.30895408313432_18.8708916348147 chr1 91413415 91414368 + 18.8708916348147 NA promoter-TSS (NM_019479) promoter-TSS (NM_019479) -669 NM_019479 55927 Mm.280029 NM_019479 ENSMUSG00000067071 Hes6 AI326893|bHLHb41 hairy and enhancer of split 6 protein-coding common_peak2_622_5964_0.234248055447067_12.6594304503061_18.8696742555517 chr6 114915285 114922693 + 18.8696742555517 NA intron (NM_177683, intron 1 of 4) intron (NM_177683, intron 1 of 4) 2763 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_239_1610_0.434752587450204_10.8711170724317_18.8653990316114 chr10 80074095 80077071 + 18.8653990316114 NA intron (NM_183426, intron 4 of 31) intron (NM_183426, intron 4 of 31) 21564 NM_001037741 625249 Mm.332810 NM_008162 ENSMUSG00000075706 Gpx4 GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx glutathione peroxidase 4 protein-coding unique_peak2_25_344_-1.2750313070246_7.79293689815323_18.8651913746061 chrX 36863418 36864972 + 18.8651913746061 NA promoter-TSS (NM_029951) promoter-TSS (NM_029951) 51 NM_029951 77644 Mm.290704 NM_029951 ENSMUSG00000006423 C330007P06Rik - RIKEN cDNA C330007P06 gene protein-coding unique_peak1_21_16_2.77233490144361_5.47363029197215_18.8642769769547 chr14 53318913 53319405 + 18.8642769769547 NA Intergenic Intergenic -823464 NM_001170918 57269 Mm.88822 NM_020512 ENSMUSG00000059887 Olfr1507 MOR244-1|Mor28|Or28 olfactory receptor 1507 protein-coding common_peak1_75_876_-0.722844206675129_9.41501092910717_18.8592265016973 chr10 118103114 118104173 + 18.8592265016973 NA Intergenic Intergenic -38144 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak2_136_1571_-0.522047945723747_10.3573615293967_18.8550988539847 chr11 58322198 58324244 + 18.8550988539847 NA promoter-TSS (NM_001256518) promoter-TSS (NM_001256518) -108 NM_001256518 319475 Mm.72124 NM_178761 ENSMUSG00000049755 Zfp672 4930488P06Rik|4930511N19Rik|Znf672 zinc finger protein 672 protein-coding common_peak1_32_416_-1.12658362578378_8.14061176055277_18.85090056606-2 chr9 88522420 88523051 + 18.85090056606 NA non-coding (NR_040721, exon 1 of 5) non-coding (NR_040721, exon 1 of 5) 162 NR_040721 72655 Mm.21798 NR_040721 ENSMUSG00000097195 Snhg5 2810026P18Rik|4933428I09Rik|mU50HG-b small nucleolar RNA host gene 5 ncRNA common_peak1_32_416_-1.12658362578378_8.14061176055277_18.85090056606 chr5 110839310 110839994 + 18.85090056606 NA promoter-TSS (NM_016681) promoter-TSS (NM_016681) 125 NM_153571 100900 Mm.200231 NM_153571 ENSMUSG00000043510 Hscb AI325508|AW049829|Hsc20 HscB iron-sulfur cluster co-chaperone protein-coding unique_peak1_17_7_3.50468536187267_4.75234268093633_18.8502671341889-2 chr7 114112067 114112520 + 18.8502671341889 NA intron (NM_025846, intron 1 of 5) ID_B1|SINE|B4 5488 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak1_17_7_3.50468536187267_4.75234268093633_18.8502671341889 chr5 113120133 113120560 + 18.8502671341889 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) -38762 NM_021352 12962 Mm.378899 NM_021352 ENSMUSG00000029352 Crybb3 AI852419 crystallin, beta B3 protein-coding common_peak1_49_595_-0.906541017139421_8.76589801189245_18.8410149116007 chr2 90847161 90847750 + 18.8410149116007 NA intron (NM_019758, intron 1 of 12) CpG 300 NM_019758 56428 Mm.28023 NM_019758 ENSMUSG00000027282 Mtch2 2310034D24Rik|4930539J07Rik|HSPC032 mitochondrial carrier 2 protein-coding common_peak1_544_4989_0.255023722183333_12.4123359613163_18.8405217343978 chr6 114872930 114877055 + 18.8405217343978 NA intron (NM_177683, intron 2 of 4) intron (NM_177683, intron 2 of 4) 46760 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_131_1512_-0.532651702183147_10.2968704211252_18.8386274807229 chr8 71591262 71593087 + 18.8386274807229 NA promoter-TSS (NM_025396) promoter-TSS (NM_025396) -10 NM_025396 66171 Mm.282284 NM_025396 ENSMUSG00000031807 Pgls 1110030K05Rik|AI447866|Plgs 6-phosphogluconolactonase protein-coding common_peak2_340_2636_0.345381761997597_11.5373727368634_18.8384165740289 chr13 37825075 37828401 + 18.8384165740289 NA promoter-TSS (NM_001177868) promoter-TSS (NM_001177868) -174 NM_001177868 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_253_1745_0.418985161730959_10.9793304244949_18.8342338203645 chr3 30792575 30794303 + 18.8342338203645 NA intron (NM_027016, intron 1 of 7) CpG 563 NM_027016 69276 Mm.26017 NM_027016 ENSMUSG00000027706 Sec62 3100002M17Rik|AI844545|AW545092|Dtrp1|HTP1|Tloc1 SEC62 homolog (S. cerevisiae) protein-coding common_peak1_26_353_-1.2453979832434_7.8449065584613_18.8340468075131 chr1 134414864 134415387 + 18.8340468075131 NA promoter-TSS (NM_001306069) promoter-TSS (NM_001306069) -253 NM_028320 72674 Mm.259976 NM_028320 ENSMUSG00000026457 Adipor1 2810031L11Rik|ACDCR1|CGI-45|Paqr1 adiponectin receptor 1 protein-coding unique_peak1_18_9_3.27843610850953_4.96114614914213_18.83282862676 chr13 55251052 55251442 + 18.83282862676 NA intron (NM_008739, intron 5 of 22) L1M3|LINE|L1 41465 NM_008739 18193 Mm.12964 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak1_142_1641_-0.509048065195378_10.4267143791801_18.8213876008412 chr12 83987013 83988814 + 18.8213876008412 NA promoter-TSS (NM_134188) promoter-TSS (NM_134188) 52 NM_134188 171210 Mm.371675 NM_134188 ENSMUSG00000021226 Acot2 AA571646|MTE-I|Mte1 acyl-CoA thioesterase 2 protein-coding common_peak2_175_2035_-0.451887169822676_10.7655782611644_18.8182060297436 chr1 75477618 75479950 + 18.8182060297436 NA promoter-TSS (NM_177056) promoter-TSS (NM_177056) 687 NM_001001565 74241 Mm.260577 NM_001001565 ENSMUSG00000032997 Chpf 1700028N03Rik|AI414328|D1Bwg1363e chondroitin polymerizing factor protein-coding common_peak2_284_2054_0.38768162785945_11.1987634924988_18.8172986271813 chr19 41829158 41831413 + 18.8172986271813 NA exon (NM_008043, exon 1 of 1) exon (NM_008043, exon 1 of 1) 315 NM_008043 14296 Mm.4573 NM_008043 ENSMUSG00000067199 Frat1 AW060382 frequently rearranged in advanced T cell lymphomas protein-coding common_peak2_112_522_0.724852361925459_9.39309331720967_18.8166428926442 chr18 46280045 46281547 + 18.8166428926442 NA promoter-TSS (NM_172627) promoter-TSS (NM_172627) 54 NM_172627 225467 Mm.262096 NM_172627 ENSMUSG00000024477 Pggt1b 2010207C17Rik|2610100E13|AI451237|AI551093|BGG1|GGT1 protein geranylgeranyltransferase type I, beta subunit protein-coding common_peak2_112_522_0.724852361925459_9.39309331720967_18.8166428926442-2 chr2 163701919 163704720 + 18.8166428926442 NA intron (NM_011106, intron 1 of 3) intron (NM_011106, intron 1 of 3) 9282 NM_011106 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak1_52_626_-0.876579867358927_8.85403169912258_18.8144111906418 chr15 66825001 66826013 + 18.8144111906418 NA intron (NM_009192, intron 1 of 8) intron (NM_009192, intron 1 of 8) 6322 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_59_179_1.14341564745439_8.06356092005687_18.8110485336525 chr9 44734272 44735275 + 18.8110485336525 NA intron (NM_153537, intron 1 of 21) intron (NM_153537, intron 1 of 21) 425 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak1_82_316_0.90116683902894_8.75892244965388_18.8098840887973 chr17 66518743 66519761 + 18.8098840887973 NA intron (NM_024448, intron 1 of 5) CpG 418 NM_024448 19328 Mm.248313 NM_024448 ENSMUSG00000023460 Rab12 2900054P15Rik|AW555448|C77700 RAB12, member RAS oncogene family protein-coding common_peak1_30_395_-1.1626744153453_8.04801941240696_18.8067799643428 chr1 127773148 127773925 + 18.8067799643428 NA promoter-TSS (NM_028399) promoter-TSS (NM_028399) 518 NR_045298 100502745 Mm.440061 NR_045298 ENSMUSG00000102014 2900009J06Rik - RIKEN cDNA 2900009J06 gene ncRNA common_peak1_97_416_0.799584974652378_9.10369606077085_18.8054065478981 chr6 97148300 97149325 + 18.8054065478981 NA promoter-TSS (NM_175313) promoter-TSS (NM_175313) 71 NM_175313 101351 Mm.116802 NM_175313 ENSMUSG00000035245 Eogt A130022J15Rik|AI447490|AW214473|AW259391|Aer61 EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding common_peak1_64_207_1.0764748021918_8.23867711923699_18.803986465645 chr2 178023290 178024077 + 18.803986465645 NA intron (NM_001177399, intron 1 of 3) RMER17B|LTR|ERVK 399 NM_001177399 626848 Mm.422604 NM_001177399 ENSMUSG00000074519 Zfp971 Etohi1 zinc finger protein 971 protein-coding common_peak2_303_3657_-0.3300259116064_11.6718264039455_18.7923934656159 chr11 69578567 69582415 + 18.7923934656159 NA 5' UTR (NM_011640, exon 1 of 11) 5' UTR (NM_011640, exon 1 of 11) 132 NM_001127233 22059 Mm.222 NM_011640 ENSMUSG00000059552 Trp53 Tp53|bbl|bfy|bhy|p44|p53 transformation related protein 53 protein-coding common_peak2_169_1962_-0.460590298427324_10.7085493082525_18.7922978434471 chr8 105936611 105938845 + 18.7922978434471 NA exon (NM_013640, exon 2 of 8) exon (NM_013640, exon 2 of 8) 664 NM_013640 19171 Mm.787 NM_013640 ENSMUSG00000031897 Psmb10 Mecl-1|Mecl1 proteasome (prosome, macropain) subunit, beta type 10 protein-coding common_peak1_133_681_0.643528082311907_9.73539197018013_18.7906759784617 chr1 91297724 91299730 + 18.7906759784617 NA intron (NM_016717, intron 1 of 11) CpG 389 NM_016717 50880 Mm.25724 NM_016717 ENSMUSG00000026307 Scly 9830169H08|A930015N15Rik|SCL|Scly1|Scly2 selenocysteine lyase protein-coding common_peak1_43_98_1.4570534338007_7.35788333697996_18.7903878017155 chr15 53723901 53724868 + 18.7903878017155 NA intron (NM_177225, intron 2 of 4) intron (NM_177225, intron 2 of 4) 178052 NM_177225 320679 Mm.442455 NM_177225 ENSMUSG00000058656 Samd12 A830094I09Rik sterile alpha motif domain containing 12 protein-coding common_peak1_104_465_0.761394086022539_9.24488318766555_18.7868238668313 chr5 34761770 34762752 + 18.7868238668313 NA intron (NM_010414, intron 1 of 66) intron (NM_010414, intron 1 of 66) 521 NM_010414 15194 Mm.209071 NM_010414 ENSMUSG00000029104 Htt AI256365|C430023I11Rik|Hd|Hdh|IT15 huntingtin protein-coding common_peak1_46_563_-0.936420264972776_8.67134121991241_18.7863943160366 chr3 131111361 131112311 + 18.7863943160366 NA promoter-TSS (NM_001276403) promoter-TSS (NM_001276403) -955 NM_001276403 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_59_702_-0.822112135288474_9.0463248114283_18.7841869524468 chr13 21782447 21784018 + 18.7841869524468 NA exon (NM_178207, exon 1 of 1) exon (NM_178207, exon 1 of 1) 165 NM_178207 319153 Mm.390558 NM_178207 ENSMUSG00000101972 Hist1h3i H3-H histone cluster 1, H3i protein-coding common_peak1_15_240_-1.61663607310479_7.10457129967756_18.7836089399635 chr3 19319498 19319864 + 18.7836089399635 NA Intergenic L1MB4|LINE|L1 -8359 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak2_61_190_1.11586568788491_8.13536167197821_18.7781618546346 chr2 177956626 177957591 + 18.7781618546346 NA intron (NM_001190302, intron 1 of 4) RMER17B|LTR|ERVK 180 NM_001282028 665211 Mm.441314 NM_001190302 ENSMUSG00000078862 Gm14326 OTTMUSG00000016327 predicted gene 14326 protein-coding common_peak2_116_552_0.705942295526437_9.46410681799793_18.7766643759725 chr1 151570852 151572672 + 18.7766643759725 NA intron (NM_022018, intron 1 of 13) intron (NM_022018, intron 1 of 13) 389 NM_022018 63913 Mm.157700 NM_022018 ENSMUSG00000026483 Fam129a AI256368|AU019833|Niban family with sequence similarity 129, member A protein-coding common_peak2_194_2267_-0.426155888456048_10.9341269807142_18.7735821761661 chr4 62407113 62409830 + 18.7735821761661 NA promoter-TSS (NM_027297) promoter-TSS (NM_027297) 152 NM_139291 66440 Mm.109930 NM_139291 ENSMUSG00000066149 Cdc26 2010012C09Rik cell division cycle 26 protein-coding common_peak1_229_2703_-0.387700734124_11.2070290692202_18.7700680037692 chr7 132811664 132814122 + 18.7700680037692 NA intron (NM_212473, intron 1 of 4) intron (NM_212473, intron 1 of 4) 303 NM_212473 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_163_1890_-0.470265760511623_10.649800767694_18.7690629954461 chr11 68432069 68433393 + 18.7690629954461 NA intron (NM_177320, intron 1 of 18) intron (NM_177320, intron 1 of 18) 606 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak1_491_4350_0.271671102050894_12.222966852566_18.7666846492518 chr12 25163277 25167126 + 18.7666846492518 NA Intergenic Intergenic 36027 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_21_301_-1.37860699663113_7.54910124100951_18.7594451875566 chr7 28179490 28179996 + 18.7594451875566 NA promoter-TSS (NM_001271370) promoter-TSS (NM_001271370) 260 NM_010092 13549 Mm.57249 NM_010092 ENSMUSG00000002409 Dyrk1b Mirk dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b protein-coding common_peak1_21_301_-1.37860699663113_7.54910124100951_18.7594451875566-2 chr9 32707171 32707750 + 18.7594451875566 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 11418 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_19_280_-1.44329209259015_7.41278027392585_18.7568708254403 chr2 167358155 167358594 + 18.7568708254403 NA Intergenic RMER5|LTR|ERV1 -9196 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak2_129_1488_-0.536601207062848_10.2718274350507_18.7544329845068 chr3 57735109 57737106 + 18.7544329845068 NA promoter-TSS (NM_001113413) promoter-TSS (NM_001113413) 45 NR_130743 24017 Mm.274360 NM_011883 ENSMUSG00000036503 Rnf13 2010001H16Rik|Rzf ring finger protein 13 protein-coding common_peak1_83_964_-0.683685865984232_9.57254219916333_18.7518465197087 chr15 60141881 60143244 + 18.7518465197087 NA Intergenic MER92-int|LTR|ERV1 -125944 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_171_993_0.541849751064376_10.2280269170945_18.7516114344396 chr14 57729141 57731056 + 18.7516114344396 NA intron (NM_153382, intron 1 of 1) intron (NM_153382, intron 1 of 1) 4320 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak2_100_1154_-0.616828942697962_9.86526266495444_18.7485805452195 chr11 119675972 119678653 + 18.7485805452195 NA intron (NM_028898, intron 3 of 33) intron (NM_028898, intron 3 of 33) 74407 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak1_123_605_0.676732843634067_9.58154040528999_18.7465428894318 chr17 14942937 14944071 + 18.7465428894318 NA promoter-TSS (NM_175173) promoter-TSS (NM_175173) 320 NM_026451 67912 Mm.390949 NM_026451 ENSMUSG00000050088 1600012H06Rik - RIKEN cDNA 1600012H06 gene protein-coding common_peak1_69_809_-0.753720072062098_9.28491806174094_18.7388318626099 chr10 77626419 77627389 + 18.7388318626099 NA intron (NM_019803, intron 1 of 5) intron (NM_019803, intron 1 of 5) 4583 NM_019803 22213 Mm.458125 NM_019803 ENSMUSG00000009293 Ube2g2 1110003O05Rik|D10Xrf369|UBC7|Ubc7p ubiquitin-conjugating enzyme E2G 2 protein-coding common_peak1_107_487_0.74469485164942_9.3030847633876_18.7322631168674 chr16 49935677 49937741 + 18.7322631168674 NA Intergenic Intergenic -43751 NR_045001 628951 Mm.428032 NR_045001 Gm6936 - predicted gene 6936 ncRNA common_peak2_71_248_0.997908052177299_8.45895595815673_18.7250956132197 chr6 106799316 106800265 + 18.7250956132197 NA intron (NM_175357, intron 1 of 10) intron (NM_175357, intron 1 of 10) 297 NM_021449 58799 Mm.290085 NM_021449 ENSMUSG00000005362 Crbn 2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL cereblon protein-coding common_peak1_95_403_0.808788607713012_9.0626057866083_18.7185157342666 chr3 51224397 51225568 + 18.7185157342666 NA 5' UTR (NM_009834, exon 1 of 3) 5' UTR (NM_009834, exon 1 of 3) 535 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak2_409_3398_0.30526651658843_11.8835279048359_18.7177839013041 chr2 18055879 18058604 + 18.7177839013041 NA promoter-TSS (NR_106115) promoter-TSS (NR_106115) -605 NR_106115 102466840 NR_106115 ENSMUSG00000099050 Mir7655 Gm27794|mmu-mir-7655 microRNA 7655 ncRNA common_peak2_62_733_-0.798027092891431_9.1206227063975_18.711550921807 chr9 123508833 123511716 + 18.711550921807 NA intron (NM_013860, intron 2 of 7) B1F1|SINE|Alu -19608 NM_030692 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding common_peak1_38_477_-1.02792335837289_8.3869051287943_18.7038482299987 chr11 107101797 107102547 + 18.7038482299987 NA intron (NM_176850, intron 2 of 27) intron (NM_176850, intron 2 of 27) 29750 NM_176850 207165 Mm.343986 NM_176850 ENSMUSG00000040481 Bptf 9430093H17Rik|Falz bromodomain PHD finger transcription factor protein-coding common_peak1_20_291_-1.41234991508152_7.48364960133926_18.6992199985311 chr2 163643408 163643910 + 18.6992199985311 NA intron (NM_012032, intron 1 of 9) PB1D10|SINE|Alu -1191 NR_028113 68386 Mm.410649 NR_028113 ENSMUSG00000058812 0610039K10Rik - RIKEN cDNA 0610039K10 gene ncRNA unique_peak2_20_291_-1.41234991508152_7.48364960133926_18.6992199985311 chr11 106194753 106196398 + 18.6992199985311 NA Intergenic Intergenic -1972 NM_001252449 72149 Mm.403722 NM_028126 ENSMUSG00000069631 Strada 2610019A05Rik|6030402H20Rik|AI480680|E130112C09Rik STE20-related kinase adaptor alpha protein-coding common_peak1_137_714_0.627408199767398_9.79550353154945_18.6947529335058 chr8 46752015 46754154 + 18.6947529335058 NA intron (NM_008391, intron 1 of 8) L1MB3|LINE|L1 13339 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak2_49_127_1.31262750332274_7.65631375166137_18.6940698960772 chr13 16012016 16012827 + 18.6940698960772 NA Intergenic Intergenic -2054 NM_008380 16323 Mm.8042 NM_008380 ENSMUSG00000041324 Inhba - inhibin beta-A protein-coding common_peak1_111_516_0.725768902075703_9.37690492135279_18.6930776667886 chr13 73775011 73776577 + 18.6930776667886 NA intron (NM_011390, intron 1 of 23) intron (NM_011390, intron 1 of 23) 12097 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak1_284_2056_0.386278227903562_11.1994651924767_18.6926928823764 chr7 80992630 80994902 + 18.6926928823764 NA promoter-TSS (NM_178707) promoter-TSS (NM_178707) 82 NM_178707 233410 Mm.29525 NM_178707 ENSMUSG00000005621 Zfp592 8430405N24|A730014M16Rik|Znf592|mKIAA0211 zinc finger protein 592 protein-coding common_peak2_168_968_0.547460993114329_10.1940833519722_18.6913497354429 chr12 54794819 54796321 + 18.6913497354429 NA promoter-TSS (NM_026998) promoter-TSS (NM_026998) 92 NM_026998 72183 Mm.28240 NM_026998 ENSMUSG00000005656 Snx6 2010006G21Rik|2610032J07Rik|2810425K19Rik|AU018928|C85963 sorting nexin 6 protein-coding common_peak1_26_352_-1.24131680643159_7.84286597005539_18.6861287015594 chr3 60468717 60469277 + 18.6861287015594 NA Intergenic Intergenic -3833 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_88_356_0.853238104735089_8.90639931639664_18.6797593166025 chr12 21111078 21112695 + 18.6797593166025 NA 5' UTR (NM_001004364, exon 1 of 27) 5' UTR (NM_001004364, exon 1 of 27) 130 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding unique_peak2_23_321_-1.31714141002252_7.67234617310336_18.6730848761178 chr7 45433612 45434808 + 18.6730848761178 NA promoter-TSS (NM_030678) promoter-TSS (NM_030678) 254 NM_011304 20174 Mm.34410 NM_011304 ENSMUSG00000003868 Ruvbl2 mp47|p47 RuvB-like protein 2 protein-coding common_peak2_190_1160_0.503219249121228_10.4327618814262_18.67197421562 chr5 44225310 44227657 + 18.67197421562 NA exon (NM_173764, exon 1 of 14) exon (NM_173764, exon 1 of 14) 123 NM_173764 231225 Mm.30688 NM_173764 ENSMUSG00000046985 Tapt1 4932414K18Rik transmembrane anterior posterior transformation 1 protein-coding common_peak1_30_394_-1.15902663833016_8.04619552389939_18.6667192567338 chr4 46526580 46527057 + 18.6667192567338 NA intron (NM_029077, intron 2 of 5) L1MB4|LINE|L1 9323 NM_029077 74735 Mm.240252 NM_029077 ENSMUSG00000039853 Trim14 5830400N10Rik|pub tripartite motif-containing 14 protein-coding common_peak2_61_722_-0.804557321030455_9.09557317643589_18.6633184972777 chr6 113604124 113605744 + 18.6633184972777 NA intron (NM_133937, intron 1 of 2) CpG 162 NM_133937 101314 Mm.485793 NM_133937 ENSMUSG00000033940 Brk1 6720456B07Rik|AW011779 BRICK1, SCAR/WAVE actin-nucleating complex subunit protein-coding common_peak2_704_7033_0.215241570832315_12.8877504050415_18.658044427249 chr19 5723852 5730208 + 18.658044427249 NA promoter-TSS (NM_001114595) promoter-TSS (NM_001114595) -713 NM_053252 114601 Mm.210447 NM_053252 ENSMUSG00000024937 Ehbp1l1 G430002G23Rik EH domain binding protein 1-like 1 protein-coding common_peak2_526_4774_0.259129429518261_12.3508497325696_18.6572617612464 chr4 149656177 149667308 + 18.6572617612464 NA intron (NM_001164052, intron 1 of 21) ID_B1|SINE|B4 1574 NM_001164052 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_261_3108_-0.358535328307834_11.4229672371871_18.6555638154515 chr1 85734847 85736900 + 18.6555638154515 NA intron (NM_177055, intron 1 of 5) intron (NM_177055, intron 1 of 5) 733 NM_177055 319997 Mm.116691 NM_177055 ENSMUSG00000052760 A630001G21Rik - RIKEN cDNA A630001G21 gene protein-coding common_peak1_28_373_-1.19823114537507_7.9477788872001_18.6547541787189 chr2 167147116 167147737 + 18.6547541787189 NA intron (NM_008420, intron 1 of 1) intron (NM_008420, intron 1 of 1) 41392 NM_008420 16500 Mm.205341 NM_008420 ENSMUSG00000050556 Kcnb1 Kcr1-1|Kv2.1|Shab potassium voltage gated channel, Shab-related subfamily, member 1 protein-coding common_peak2_118_568_0.694787527933062_9.49967860627311_18.6474626814978 chr18 68299355 68301225 + 18.6474626814978 NA promoter-TSS (NM_153794) promoter-TSS (NM_153794) 43 NM_153794 108654 Mm.125857 NM_153794 ENSMUSG00000038121 Fam210a 4933403F05Rik|AA987140|AV134576|AW491926 family with sequence similarity 210, member A protein-coding common_peak2_212_1359_0.467903125862598_10.643342499069_18.6429490072608 chr14 75190940 75194990 + 18.6429490072608 NA intron (NM_008879, intron 2 of 16) intron (NM_008879, intron 2 of 16) -49322 NM_019775 56373 Mm.24242 NM_019775 ENSMUSG00000021999 Cpb2 1110032P04Rik|4930405E17Rik|AI255929|CPR|Cpu|TAFI carboxypeptidase B2 (plasma) protein-coding common_peak2_71_830_-0.740794682524966_9.32830732550786_18.6420614732687 chr13 101729643 101731585 + 18.6420614732687 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) 37603 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_66_219_1.04918398662506_8.30595170683719_18.630923437354 chr14 30825416 30826618 + 18.630923437354 NA intron (NM_028839, intron 1 of 7) CpG 423 NM_028839 69179 Mm.143025 NM_028839 ENSMUSG00000006526 Tmem110 1810038N08Rik|2310014H19Rik|AW554125|STIMATE transmembrane protein 110 protein-coding common_peak1_337_2608_0.345144930898314_11.5218536942666_18.6211670205223 chr13 37825195 37828183 + 18.6211670205223 NA promoter-TSS (NM_001177868) promoter-TSS (NM_001177868) -223 NM_001177868 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_98_1130_-0.621928750175655_9.83241883890199_18.6057778622592 chr10 93402693 93404100 + 18.6057778622592 NA Intergenic Tigger5|DNA|TcMar-Tigger -29711 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA common_peak2_108_495_0.737545925142761_9.32296927295826_18.6013304277201 chr4 132949398 132952164 + 18.6013304277201 NA Intergenic ID_B1|SINE|B4 -23314 NM_010208 14191 Mm.271665 NM_010208 ENSMUSG00000028874 Fgr - FGR proto-oncogene, Src family tyrosine kinase protein-coding common_peak1_21_300_-1.37382193406575_7.54670870972683_18.6001858173765 chr2 92205392 92205890 + 18.6001858173765 NA intron (NM_001109691, intron 2 of 18) intron (NM_001109691, intron 2 of 18) 13664 NR_035480 100316756 NR_035480 ENSMUSG00000088639 Mir1955 mir-1955|mmu-mir-1955 microRNA 1955 ncRNA common_peak2_56_667_-0.839205572923879_8.96410150601211_18.596878102451 chr10 41528904 41531180 + 18.596878102451 NA 3' UTR (NM_016898, exon 6 of 6) 3' UTR (NM_016898, exon 6 of 6) 10542 NM_016898 53599 Mm.269815 NM_016898 ENSMUSG00000019818 Cd164 A115|A24|AA589639|AW540279|MGC-24|MSSP CD164 antigen protein-coding common_peak2_47_571_-0.919483557499937_8.70012955802842_18.5960960367958 chr9 21072830 21074555 + 18.5960960367958 NA promoter-TSS (NM_001039824) promoter-TSS (NM_001039824) -178 NM_001039824 68165 Mm.490294 NM_001039824 ENSMUSG00000079677 Fdx1l B230118G17Rik|Fdx2 ferredoxin 1-like protein-coding common_peak2_476_4176_0.275759369586886_12.1661311129562_18.5830519655624 chr13 52580277 52585589 + 18.5830519655624 NA promoter-TSS (NM_001198977) promoter-TSS (NM_001198977) -504 NM_001198977 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding unique_peak1_24_25_2.38557547399529_5.89322745513874_18.5776850115876 chr3 30875055 30875390 + 18.5776850115876 NA intron (NM_001286994, intron 1 of 3) Lx9|LINE|L1 19272 NM_001286994 71862 Mm.272019 NM_027965 ENSMUSG00000037661 Gpr160 1700025D19Rik|GPCR150 G protein-coupled receptor 160 protein-coding common_peak1_137_1579_-0.516501211631315_10.3674582372488_18.5739779964084 chr10 91181094 91182533 + 18.5739779964084 NA Intergenic CpG -10194 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak1_45_108_1.39688879050294_7.4666287200284_18.5738954657312 chr11 49845975 49846606 + 18.5738954657312 NA promoter-TSS (NM_207692) promoter-TSS (NM_207692) -461 NM_001163671 26420 Mm.68933 NM_016961 ENSMUSG00000020366 Mapk9 AI851083|JNK2|Prkm9|p54aSAPK mitogen-activated protein kinase 9 protein-coding common_peak1_59_700_-0.818001890226563_9.04426968889734_18.5726864847705 chr3 84040183 84040909 + 18.5726864847705 NA promoter-TSS (NM_172681) promoter-TSS (NM_172681) -385 NM_172681 229473 Mm.28838 NM_172681 ENSMUSG00000033767 D930015E06Rik Kiaa0922|mKIAA0922 RIKEN cDNA D930015E06 gene protein-coding common_peak1_215_2524_-0.400023172127856_11.1020560864626_18.565304139721 chr12 86946325 86948497 + 18.565304139721 NA promoter-TSS (NM_173735) promoter-TSS (NM_173735) 68 NM_001289432 217732 Mm.22337 NM_173735 ENSMUSG00000034157 Cipc 2310044G17Rik|AI842544|AI853744|Kiaa1737|mKIAA1737 CLOCK interacting protein, circadian protein-coding common_peak1_133_1531_-0.524044570588877_10.3191782966305_18.5642775973651 chr1 63176092 63177637 + 18.5642775973651 NA promoter-TSS (NM_018796) promoter-TSS (NM_018796) 33 NM_018796 55949 Mm.2718 NM_018796 ENSMUSG00000025967 Eef1b2 2810017J07Rik|Eef1b eukaryotic translation elongation factor 1 beta 2 protein-coding common_peak2_55_656_-0.846572499118048_8.9364633107633_18.5631870548996 chr8 122998838 123001535 + 18.5631870548996 NA intron (NR_037865, intron 1 of 13) B3|SINE|B2 42098 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_699_6970_0.215626011489714_12.8749629180297_18.5607697940417 chr4 48041497 48048637 + 18.5607697940417 NA promoter-TSS (NM_015743) promoter-TSS (NM_015743) -238 NM_015743 18124 Mm.247261 NM_015743 ENSMUSG00000028341 Nr4a3 AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC nuclear receptor subfamily 4, group A, member 3 protein-coding common_peak1_111_1277_-0.579882748556358_10.0297307466688_18.5594734933733 chr11 57951157 57952821 + 18.5594734933733 NA Intergenic Intergenic -57075 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_78_906_-0.702859649415206_9.47352891582092_18.554955337698 chr8 13784763 13786421 + 18.554955337698 NA promoter-TSS (NM_025924) promoter-TSS (NM_025924) -23 NM_025924 67031 Mm.44858 NM_025924 ENSMUSG00000038398 Upf3a 2600001C03Rik|4930546M19Rik|RENT3A|UPF3 UPF3 regulator of nonsense transcripts homolog A (yeast) protein-coding common_peak1_12_207_-1.77163078468651_6.81462432579783_18.5479254791343 chr14 75034557 75034867 + 18.5479254791343 NA intron (NM_198642, intron 2 of 13) B2_Mm2|SINE|B2 18685 NM_198642 271221 Mm.320280 NM_198642 ENSMUSG00000034959 Rubcnl 5031414D18Rik|Gm744|Gm911|Kiaa0226l RUN and cysteine rich domain containing beclin 1 interacting protein like protein-coding common_peak2_127_637_0.658677582919367_9.64675140522455_18.5392572049331 chr6 29467176 29469074 + 18.5392572049331 NA intron (NM_025381, intron 1 of 1) intron (NM_025381, intron 1 of 1) 342 NM_025381 66144 Mm.371614 NM_025381 ENSMUSG00000004285 Atp6v1f 1110004G16Rik ATPase, H+ transporting, lysosomal V1 subunit F protein-coding common_peak2_103_460_0.760022926584305_9.22863440372149_18.5375338064363 chr18 60623510 60625524 + 18.5375338064363 NA promoter-TSS (NM_177340) promoter-TSS (NM_177340) -212 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_84_331_0.876602416505566_8.81334063959971_18.5366855667526 chr4 63561564 63562844 + 18.5366855667526 NA intron (NM_144905, intron 2 of 9) intron (NM_144905, intron 2 of 9) 1844 NM_144905 230279 Mm.41523 NM_144905 ENSMUSG00000045917 Tmem268 6330416G13Rik|AW492431|bM230C2.2 transmembrane protein 268 protein-coding common_peak2_317_2398_0.358271150489317_11.4073530175381_18.5323935966348 chr11 87590529 87593634 + 18.5323935966348 NA promoter-TSS (NM_133215) promoter-TSS (NM_133215) -136 NM_133215 170749 Mm.399376 NM_133215 ENSMUSG00000018401 Mtmr4 AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647 myotubularin related protein 4 protein-coding common_peak1_58_689_-0.824926146623707_9.01798947835368_18.5304971389282 chr17 46751398 46752151 + 18.5304971389282 NA intron (NM_028065, intron 1 of 5) intron (NM_028065, intron 1 of 5) 440 NM_001305989 72029 Mm.240325 NM_028065 ENSMUSG00000023973 Cnpy3 1600025D17Rik|2410050O22Rik|AI413153|CAG4A|ERDA5|PRAT4A|Tnrc5 canopy FGF signaling regulator 3 protein-coding common_peak1_154_1779_-0.482873734241133_10.5562246587332_18.5235361464343 chr19 4190565 4192090 + 18.5235361464343 NA promoter-TSS (NM_031868) promoter-TSS (NM_031868) -280 NM_178650 108995 Mm.288312 NM_178650 ENSMUSG00000040247 Tbc1d10c 1810062O14Rik|AI428527 TBC1 domain family, member 10c protein-coding common_peak1_106_1219_-0.593695013094475_9.95581792590301_18.523179260498 chr13 49306539 49307684 + 18.523179260498 NA intron (NM_015759, intron 1 of 17) intron (NM_015759, intron 1 of 17) 2097 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak1_387_3155_0.314681495722661_11.7812222378748_18.5215966924575 chr19 34605345 34608375 + 18.5215966924575 NA Intergenic Intergenic -1097 NM_001005858 667370 Mm.271850 NM_001005858 ENSMUSG00000062488 Ifit3b I830012O16Rik interferon-induced protein with tetratricopeptide repeats 3B protein-coding common_peak1_41_508_-0.987434891090841_8.49780440053027_18.5195573224658 chr9 44378818 44379337 + 18.5195573224658 NA promoter-TSS (NM_021395) promoter-TSS (NM_021395) -413 NM_021395 12282 Mm.116721 NM_021395 ENSMUSG00000032115 Hyou1 AI415631|CBP-140|Cab140|Grp170|Orp150 hypoxia up-regulated 1 protein-coding common_peak1_34_60_1.75070837696065_6.80609152604321_18.5124387928132 chr16 17095877 17096498 + 18.5124387928132 NA intron (NM_144954, intron 8 of 20) intron (NM_144954, intron 8 of 20) 15065 NM_001252445 66053 Mm.253614 NM_144954 ENSMUSG00000022771 Ppil2 0610009L05Rik|1700016N17Rik|4921520K19Rik|4930511F14Rik|AA589416|C130078A06Rik|CYC4 peptidylprolyl isomerase (cyclophilin)-like 2 protein-coding common_peak1_99_1140_-0.616843261779586_9.84766144539889_18.5109237035958 chr1 155050385 155051543 + 18.5109237035958 NA Intergenic Intergenic 48672 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_35_444_-1.06636385279474_8.26447959945639_18.509029768589-3 chr8 70506317 70506948 + 18.509029768589 NA intron (NM_025577, intron 1 of 4) CpG-14099 107 NM_025577 66462 Mm.28242 NM_025577 ENSMUSG00000058833 2810428I15Rik - RIKEN cDNA 2810428I15 gene protein-coding common_peak1_35_444_-1.06636385279474_8.26447959945639_18.509029768589-2 chr7 44747715 44748393 + 18.509029768589 NA promoter-TSS (NM_133945) promoter-TSS (NM_133945) 295 NM_001289836 243963 Mm.382935 NM_178734 ENSMUSG00000048012 Zfp473 D030014N22Rik|Znf473|zfp-100 zinc finger protein 473 protein-coding common_peak1_35_444_-1.06636385279474_8.26447959945639_18.509029768589 chr5 64475097 64475918 + 18.509029768589 NA Intergenic MTE2b|LTR|ERVL-MaLR -1501 NR_045411 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA unique_peak1_13_1_5.05995243883157_3.52997621941579_18.507475417746 chr11 20859269 20859709 + 18.507475417746 NA Intergenic Intergenic -28381 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak1_303_2253_0.368541647970094_11.3225426241573_18.5047888927687 chr13 93770443 93773389 + 18.5047888927687 NA exon (NM_009712, exon 1 of 8) exon (NM_009712, exon 1 of 8) 237 NM_009712 11881 Mm.300178 NM_009712 ENSMUSG00000042082 Arsb 1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B protein-coding common_peak1_53_634_-0.861792903633578_8.87971632984274_18.5040712101406 chr13 43484718 43485672 + 18.5040712101406 NA Intergenic MLT1F2|LTR|ERVL-MaLR -4222 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak1_14_228_-1.6571596666856_7.01062395475415_18.4942574216722 chr17 27827057 27827483 + 18.4942574216722 NA Intergenic Intergenic -6728 NM_001271511 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding unique_peak1_28_38_2.06326109565032_6.31703276668741_18.4840077718899 chr13 34037549 34038134 + 18.4840077718899 NA intron (NM_026512, intron 1 of 6) CpG 200 NM_026512 68021 Mm.140243 NM_026512 ENSMUSG00000038286 Bphl 2010012D11Rik|5730533B08Rik|AI115341 biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen) protein-coding common_peak1_429_3631_0.293896581027711_11.9734967778048_18.4822278123708 chr15 60097363 60101849 + 18.4822278123708 NA Intergenic Intergenic -82988 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_272_1938_0.395382470766538_11.1187883234901_18.4795392258788 chr11 48932691 48936720 + 18.4795392258788 NA Intergenic Lx2A|LINE|L1 -7523 NM_001045540 620913 Mm.452174 NM_001045540 ENSMUSG00000048852 Gm12185 Irgb2b1|OTTMUSG00000005523 predicted gene 12185 protein-coding common_peak1_31_403_-1.13534590844027_8.09053852853166_18.4794850466928 chr6 83078332 83078823 + 18.4794850466928 NA intron (NM_197992, intron 1 of 8) CpG 187 NM_197992 69837 Mm.12261 NM_197992 ENSMUSG00000069678 Pcgf1 2010002K04Rik|AU024121|Nspc1 polycomb group ring finger 1 protein-coding common_peak1_68_796_-0.755840593743677_9.26051561711863_18.4792762761009 chr7 19268893 19270137 + 18.4792762761009 NA intron (NR_104069, intron 1 of 10) intron (NR_104069, intron 1 of 10) 2339 NM_001282021 22323 Mm.9684 NM_009499 ENSMUSG00000030403 Vasp - vasodilator-stimulated phosphoprotein protein-coding common_peak2_244_1663_0.424542105647912_10.912710770965_18.4747999602883 chr17 71182363 71185289 + 18.4747999602883 NA promoter-TSS (NM_022882) promoter-TSS (NM_022882) -152 NM_022882 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak1_142_1636_-0.504648259891725_10.4245144765283_18.4739718553412 chr13 58157368 58158844 + 18.4739718553412 NA intron (NM_198004, intron 1 of 4) intron (NM_198004, intron 1 of 4) 457 NM_198004 75731 Mm.293919 NM_198004 ENSMUSG00000050002 Idnk 5133401N09Rik idnK gluconokinase homolog (E. coli) protein-coding common_peak1_339_2632_0.342374664179143_11.5336791381356_18.4731737961197 chr11 105180530 105182890 + 18.4731737961197 NA promoter-TSS (NR_027956) promoter-TSS (NR_027956) 183 NM_001294329 24086 Mm.126976 NM_011903 ENSMUSG00000020694 Tlk2 4933403M19Rik|PKU-alpha|PKUalpha|Tlk tousled-like kinase 2 (Arabidopsis) protein-coding common_peak1_35_64_1.70892986003057_6.87683274304374_18.4731230007868 chr10 39408270 39409063 + 18.4731230007868 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 38867 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_114_1310_-0.569885579249926_10.0715091805968_18.470789786011 chr12 25096208 25097616 + 18.470789786011 NA promoter-TSS (NM_010496) promoter-TSS (NM_010496) -820 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak2_156_870_0.570946725806785_10.0520022715023_18.4579410408804 chr10 66863415 66865908 + 18.4579410408804 NA Intergenic Intergenic -140414 NR_110511 102634101 Mm.445258 NR_110511 Gm31763 - predicted gene, 31763 ncRNA common_peak1_84_972_-0.674654146928621_9.5889689213168_18.4486419672469 chr13 113086518 113087865 + 18.4486419672469 NA intron (NM_001281487, intron 11 of 11) intron (NM_001281487, intron 11 of 11) 13790 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak1_175_2029_-0.447629335819519_10.7634493441628_18.4437404461295 chr2 129179300 129181277 + 18.4437404461295 NA intron (NR_045264, intron 1 of 2) intron (NR_045264, intron 1 of 2) 385 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 OTTMUSG00000015420 expressed sequence AI847159 ncRNA common_peak1_56_164_1.17817650530436_7.95541046689799_18.4397315910234 chr14 40956036 40957133 + 18.4397315910234 NA intron (NM_145928, intron 1 of 8) intron (NM_145928, intron 1 of 8) -8375 NM_001316748 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding common_peak1_46_560_-0.928725873182776_8.6674940240174_18.4334380328108 chr18 34782864 34783689 + 18.4334380328108 NA intron (NM_001081256, intron 1 of 23) intron (NM_001081256, intron 1 of 23) 6268 NM_001081256 277250 Mm.277906 NM_029518 ENSMUSG00000038773 Kdm3b 5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082 KDM3B lysine (K)-specific demethylase 3B protein-coding common_peak1_137_1577_-0.514673858580307_10.3665445607233_18.4329453907027 chr19 4755612 4757270 + 18.4329453907027 NA promoter-TSS (NM_025717) promoter-TSS (NM_025717) -84 NM_025717 66704 Mm.396734 NM_025717 ENSMUSG00000033760 Rbm4b 4921506I22Rik|AI504630|AI506404|Lark2|Neosin RNA binding motif protein 4B protein-coding common_peak1_76_883_-0.711181018618365_9.43231205008225_18.4320725689684 chr19 3769051 3769795 + 18.4320725689684 NA intron (NM_001167886, intron 2 of 10) intron (NM_001167886, intron 2 of 10) 2002 NM_001167885 225888 Mm.278578 NM_144871 ENSMUSG00000045098 Kmt5b AA117471|C630029K18Rik|Suv4-20h1|Suv420h1 lysine methyltransferase 5B protein-coding common_peak1_48_123_1.32267992652381_7.61553627364878_18.4282127928312 chr19 55099388 55100052 + 18.4282127928312 NA promoter-TSS (NM_008149) promoter-TSS (NM_008149) -273 NM_008149 14732 Mm.210196 NM_008149 ENSMUSG00000024978 Gpam GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding common_peak1_99_1139_-0.61557829454301_9.8470289617806_18.4281450117891 chr5 31452154 31453551 + 18.4281450117891 NA intron (NM_172993, intron 1 of 13) intron (NM_172993, intron 1 of 13) 416 NM_172993 269639 Mm.259127 NM_172993 ENSMUSG00000062761 Zfp512 2500002M11Rik|AI450173|D230008H22|Znf512 zinc finger protein 512 protein-coding common_peak1_19_278_-1.43298708419841_7.40762776972998_18.4277300210878 chr10 41303395 41303820 + 18.4277300210878 NA promoter-TSS (NM_133999) promoter-TSS (NM_133999) -366 NM_133999 103199 Mm.277242 NM_133999 ENSMUSG00000038417 Fig4 A530089I17Rik|AI326867|Sac3 FIG4 phosphoinositide 5-phosphatase protein-coding common_peak1_325_2484_0.351426618658078_11.4547434457787_18.4193233234783 chr10 54073970 54076429 + 18.4193233234783 NA promoter-TSS (NR_038016) promoter-TSS (NR_038016) 597 NM_008548 17155 Mm.117294 NM_008548 ENSMUSG00000003746 Man1a Man1a1|PCR1 mannosidase 1, alpha protein-coding common_peak2_52_143_1.2458167640008_7.79283338344271_18.4166894550808 chr7 66218267 66219453 + 18.4166894550808 NA Intergenic MLTR14|LTR|ERV1 109345 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding unique_peak2_6_144_-2.34656896236972_6.00662460883007_18.4109842050368 chr6 83785557 83786462 + 18.4109842050368 NA Intergenic RMER5|LTR|ERV1 -9048 NM_019542 56174 Mm.190650 NM_019542 ENSMUSG00000034744 Nagk Gnk N-acetylglucosamine kinase protein-coding common_peak1_331_2548_0.347014833518861_11.4892230747816_18.4077324838899 chr8 120724347 120726892 + 18.4077324838899 NA Intergenic Intergenic -10739 NM_008320 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_90_1038_-0.648634896184165_9.69666249081213_18.4013374433931 chr10 115383666 115384832 + 18.4013374433931 NA promoter-TSS (NM_001033261) promoter-TSS (NM_001033261) 186 NM_025780 66816 Mm.32314 NM_025780 ENSMUSG00000020137 Thap2 2900040O07Rik|9030625G08Rik|AI450385|AI649097 THAP domain containing, apoptosis associated protein 2 protein-coding common_peak1_18_268_-1.47109815915973_7.33591328297676_18.397065909945 chr5 72913839 72914289 + 18.397065909945 NA promoter-TSS (NM_001113423) promoter-TSS (NM_001113423) -298 NM_001113423 75991 Mm.121285 NM_153567 ENSMUSG00000036087 Slain2 5033405K12Rik|8030444K12Rik|AI596370 SLAIN motif family, member 2 protein-coding unique_peak1_31_49_1.8790093845368_6.58336088204312_18.3931767414612 chr2 175605633 175606131 + 18.3931767414612 NA Intergenic RMER17B|LTR|ERVK -34509 NM_001177543 100039060 Mm.289463 NM_001177543 ENSMUSG00000078886 0610010B08Rik Gm2026 RIKEN cDNA 0610010B08 gene protein-coding common_peak1_26_350_-1.23311965346497_7.83876739357208_18.3913950819444 chr11 98681884 98682495 + 18.3913950819444 NA promoter-TSS (NM_009439) promoter-TSS (NM_009439) -365 NM_009439 22123 Mm.12194 NM_009439 ENSMUSG00000017221 Psmd3 AI255837|AntP91a|D11Bwg1349e|Psd3|Tstap91a proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 protein-coding unique_peak2_26_350_-1.23311965346497_7.83876739357208_18.3913950819444 chr6 68242157 68244109 + 18.3913950819444 NA Intergenic RLTR3_Mm|LTR|ERVK -677434 NR_003100 75070 Mm.463364 NR_003100 4930515G16Rik - myc induced nuclear antigen pseudogene pseudo common_peak1_34_433_-1.08010551792094_8.22149847348401_18.3913748426192 chr10 42027204 42027844 + 18.3913748426192 NA Intergenic Intergenic -9142 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak1_20_289_-1.40243444621644_7.47869186690672_18.3764848106271 chr13 19355864 19356339 + 18.3764848106271 NA Intergenic Intergenic 39712 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak2_85_338_0.867198018303961_8.83874047228833_18.3726831332138 chr4 63561474 63562856 + 18.3726831332138 NA intron (NM_144905, intron 2 of 9) intron (NM_144905, intron 2 of 9) 1805 NM_144905 230279 Mm.41523 NM_144905 ENSMUSG00000045917 Tmem268 6330416G13Rik|AW492431|bM230C2.2 transmembrane protein 268 protein-coding common_peak1_265_1870_0.400918780607933_11.0700532335448_18.3710638676729 chr11 48932793 48936310 + 18.3710638676729 NA Intergenic Lx2A|LINE|L1 -7369 NM_001045540 620913 Mm.452174 NM_001045540 ENSMUSG00000048852 Gm12185 Irgb2b1|OTTMUSG00000005523 predicted gene 12185 protein-coding common_peak1_28_371_-1.19049549659546_7.9439110628103_18.3683164120078 chr14 122105073 122105588 + 18.3683164120078 NA non-coding (NR_015586, exon 2 of 4) non-coding (NR_015586, exon 2 of 4) 1644 NR_015586 319727 Mm.215552 NR_015586 A330035P11Rik - RIKEN cDNA A330035P11 gene ncRNA common_peak2_325_2485_0.350846174055242_11.4550336680801_18.3631981094506 chr10 62650086 62652583 + 18.3631981094506 NA promoter-TSS (NM_053183) promoter-TSS (NM_053183) -136 NM_053183 94213 Mm.114116 NM_053183 ENSMUSG00000020076 Ddx50 4933429B04Rik|8430408E17Rik|GU2|RH-II DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein-coding common_peak2_428_3622_0.293355772282423_11.9696469765945_18.3547099271347 chr5 90364238 90367562 + 18.3547099271347 NA exon (NM_030886, exon 1 of 34) exon (NM_030886, exon 1 of 34) 285 NM_030886 81702 Mm.245522 NM_030886 ENSMUSG00000055204 Ankrd17 4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697 ankyrin repeat domain 17 protein-coding unique_peak2_11_195_-1.82754668720947_6.70093650051047_18.3502238815244 chr12 89723615 89724913 + 18.3502238815244 NA intron (NM_172544, intron 14 of 19) intron (NM_172544, intron 14 of 19) -88219 NM_001252074 18191 Mm.425766 NM_172544 ENSMUSG00000066392 Nrxn3 - neurexin III protein-coding common_peak1_55_654_-0.84217403522053_8.93426407881455_18.3458450053964 chr11 83440021 83440963 + 18.3458450053964 NA exon (NM_025492, exon 2 of 3) exon (NM_025492, exon 2 of 3) 2798 NM_025492 66330 Mm.44800 NM_025492 ENSMUSG00000035085 1700020L24Rik - RIKEN cDNA 1700020L24 gene protein-coding common_peak1_187_2174_-0.430443975824721_10.8715776977111_18.3442234162922 chr11 53794991 53797263 + 18.3442234162922 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 25654 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak1_79_300_0.910739173243787_8.6889892633816_18.3329882221101 chr2 168954928 168956133 + 18.3329882221101 NA promoter-TSS (NM_009564) promoter-TSS (NM_009564) 57 NM_009564 22722 Mm.2095 NM_009564 ENSMUSG00000027551 Zfp64 - zinc finger protein 64 protein-coding common_peak2_65_762_-0.771606987987294_9.18973575284088_18.3300480134957 chr15 76659203 76661075 + 18.3300480134957 NA promoter-TSS (NM_019396) promoter-TSS (NM_019396) 69 NM_001276322 54151 Mm.247752 NM_019396 ENSMUSG00000053929 Cyhr1 1110031M01Rik|AU042374|Chrp cysteine and histidine rich 1 protein-coding unique_peak1_15_4_3.97432516823781_4.30909067900626_18.323818145817-2 chr5 88952974 88953366 + 18.323818145817 NA intron (NM_001197147, intron 2 of 25) intron (NM_001197147, intron 2 of 25) 65910 NM_018760 54403 Mm.41044 NM_018760 ENSMUSG00000060961 Slc4a4 AI835705|NBC|NBC1 solute carrier family 4 (anion exchanger), member 4 protein-coding unique_peak1_15_4_3.97432516823781_4.30909067900626_18.323818145817 chr2 44955977 44956279 + 18.323818145817 NA Intergenic Intergenic 67049 NR_039591 100628598 NR_039591 ENSMUSG00000092679 Mir5129 mir-5129|mmu-mir-5129|mu-mir-5129 microRNA 5129 ncRNA common_peak1_410_3418_0.30111336525475_11.8899153900608_18.3185676938651 chr1 30872148 30874400 + 18.3185676938651 NA Intergenic CpG -10018 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik|mKIAA0244 PHD finger protein 3 protein-coding common_peak1_114_1308_-0.567682990973411_10.0704078864585_18.316531655563 chr11 96465266 96466994 + 18.316531655563 NA intron (NM_001033186, intron 1 of 12) intron (NM_001033186, intron 1 of 12) 1539 NM_001177898 78473 Mm.395840 NM_001033186 ENSMUSG00000057058 Skap1 1700091G21Rik|Scap1|Skap-55 src family associated phosphoprotein 1 protein-coding common_peak2_74_860_-0.719719719107177_9.39000956784325_18.3134902548257 chr10 63428460 63430749 + 18.3134902548257 NA promoter-TSS (NM_177612) promoter-TSS (NM_177612) -494 NM_177612 216033 Mm.444692 NM_177612 ENSMUSG00000060843 Ctnna3 4930429L08Rik|4933408A16|Catna3|Vr22 catenin (cadherin associated protein), alpha 3 protein-coding common_peak2_57_675_-0.825603810583258_8.98807753099056_18.3120701933113 chr1 119525441 119527014 + 18.3120701933113 NA promoter-TSS (NM_146103) promoter-TSS (NM_146103) 73 NM_146103 226351 Mm.439806 NM_146103 ENSMUSG00000098923 Tmem185b 2500001K11Rik transmembrane protein 185B protein-coding common_peak2_87_1003_-0.658521188884109_9.64228295950872_18.2978493587516 chr9 120110052 120111635 + 18.2978493587516 NA intron (NM_144793, intron 1 of 6) CpG 444 NM_144793 208638 Mm.236656 NM_144793 ENSMUSG00000032519 Slc25a38 AV019094|BC010801|appoptosin solute carrier family 25, member 38 protein-coding unique_peak1_32_53_1.82243244549741_6.66610372491217_18.2932255441832-2 chr6 72544136 72544799 + 18.2932255441832 NA promoter-TSS (NM_001271415) promoter-TSS (NM_001271415) -70 NM_001271415 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak1_32_53_1.82243244549741_6.66610372491217_18.2932255441832 chr17 88255844 88256544 + 18.2932255441832 NA Intergenic CpG 130682 NM_001190356 225058 Mm.312053 NM_001190356 Gm4832 EG225058 predicted gene 4832 protein-coding unique_peak1_27_35_2.11663974857561_6.22824487573012_18.2902049187241 chr5 73246368 73247015 + 18.2902049187241 NA intron (NM_028194, intron 1 of 62) L3b|LINE|CR1 9927 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_117_564_0.690031658925632_9.48712288676537_18.2865471469749 chr1 87650029 87651827 + 18.2865471469749 NA intron (NR_122078, intron 2 of 27) intron (NR_122078, intron 2 of 27) 30616 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_21_298_-1.36420393150415_7.54189970844603_18.2828804215468 chr3 88335647 88336164 + 18.2828804215468 NA promoter-TSS (NM_178246) promoter-TSS (NM_178246) -355 NM_178246 229512 Mm.439830 NM_173188 ENSMUSG00000001415 Smg5 BC024683|mKIAA1089 Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_81_936_-0.683849661407404_9.52998040695548_18.2782967550496 chr18 62188089 62189613 + 18.2782967550496 NA Intergenic Intergenic -8870 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding unique_peak2_8_164_-2.0882491635595_6.32219763246606_18.2743341729259 chr5 77134056 77135098 + 18.2743341729259 NA Intergenic Intergenic -19454 NM_175606 74318 Mm.181852 NM_175606 ENSMUSG00000059325 Hopx 1110018K11Rik|1200015P04Rik|2300002F06Rik|AI848177|AW490897|Cameo|Hdop|Hod|Hop|Ob1|Obl|Toto HOP homeobox protein-coding common_peak1_523_4747_0.257207664577679_12.3417080519307_18.2679872035161 chr4 125122013 125124904 + 18.2679872035161 NA intron (NM_153159, intron 2 of 5) intron (NM_153159, intron 2 of 5) 4423 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak2_80_307_0.899555542297977_8.71656431184389_18.2666860530643 chr11 101225622 101226637 + 18.2666860530643 NA intron (NM_007970, intron 1 of 20) CpG 334 NM_007970 14055 Mm.5027 NM_007970 ENSMUSG00000006920 Ezh1 ENX-2 enhancer of zeste 1 polycomb repressive complex 2 subunit protein-coding common_peak1_19_277_-1.42780684509273_7.40503765017714_18.2637918090739 chr19 31337493 31337947 + 18.2637918090739 NA intron (NM_011160, intron 2 of 17) intron (NM_011160, intron 2 of 17) -121324 NR_002849 78103 Mm.445198 NR_002849 8430431K14Rik - RIKEN cDNA 8430431K14 gene ncRNA common_peak1_19_277_-1.42780684509273_7.40503765017714_18.2637918090739-2 chr7 127293982 127294365 + 18.2637918090739 NA Intergenic Intergenic -2087 NM_001253873 16408 Mm.1618 NM_008400 ENSMUSG00000030830 Itgal (p180)|Cd11a|LFA-1|LFA-1A|Ly-15|Ly-21 integrin alpha L protein-coding common_peak2_212_1364_0.462608826193087_10.6459896489038_18.263786285073 chr7 122288498 122290685 + 18.263786285073 NA intron (NM_001316672, intron 1 of 16) CpG 466 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak1_248_1705_0.417238454003341_10.94502115832_18.263299446808 chr13 63430576 63432696 + 18.263299446808 NA 5' UTR (NM_001042673, exon 1 of 16) 5' UTR (NM_001042673, exon 1 of 16) 109 NM_007985 14088 Mm.126106 NM_007985 ENSMUSG00000021461 Fancc Facc Fanconi anemia, complementation group C protein-coding common_peak1_132_1516_-0.523105057584672_10.3054528414547_18.2623455684643 chr5 122371447 122373272 + 18.2623455684643 NA promoter-TSS (NM_026883) promoter-TSS (NM_026883) -149 NM_024216 68080 Mm.266328 NM_024216 ENSMUSG00000029464 Gpn3 A930018B01Rik|Atpbd1c|D5Ertd708e GPN-loop GTPase 3 protein-coding common_peak1_53_149_1.22000118753007_7.83881928426092_18.24458314417 chr7 66218169 66219412 + 18.24458314417 NA Intergenic Intergenic 109275 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_26_349_-1.22900354499273_7.83670933933596_18.2445831441699 chr9 124037841 124038391 + 18.2445831441699 NA Intergenic Intergenic 16145 NM_009914 12771 Mm.57050 NM_009914 ENSMUSG00000035448 Ccr3 CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3 chemokine (C-C motif) receptor 3 protein-coding common_peak1_159_897_0.560399526448698_10.0907713979655_18.23881551703 chr6 122308534 122310189 + 18.23881551703 NA intron (NM_010749, intron 1 of 6) intron (NM_010749, intron 1 of 6) 351 NM_010749 17113 Mm.249225 NM_010749 ENSMUSG00000007458 M6pr CD-MPR|Mpr46 mannose-6-phosphate receptor, cation dependent protein-coding common_peak2_39_82_1.54270710747021_7.14639298508203_18.2342197465807 chr16 29945559 29946218 + 18.2342197465807 NA Intergenic Intergenic 33236 NR_037689 328657 Mm.425982 NM_001033403 Gm1968 - predicted gene 1968 ncRNA common_peak1_65_761_-0.769714928646085_9.18878972317028_18.2295947837179 chr13 23542937 23543498 + 18.2295947837179 NA promoter-TSS (NM_013548) promoter-TSS (NM_013548) 227 NM_178197 319182 Mm.352273 NM_178197 ENSMUSG00000064168 Hist1h2bh H2b-221 histone cluster 1, H2bh protein-coding common_peak1_247_1696_0.417748288750712_10.937644993918_18.2283383519408 chr13 6646682 6649361 + 18.2283383519408 NA intron (NM_001291071, intron 1 of 21) intron (NM_001291071, intron 1 of 21) 750 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding common_peak1_108_498_0.728846230192376_9.32731912043345_18.2270046332389 chr18 46280188 46281307 + 18.2270046332389 NA exon (NM_172627, exon 1 of 9) exon (NM_172627, exon 1 of 9) 103 NM_172627 225467 Mm.262096 NM_172627 ENSMUSG00000024477 Pggt1b 2010207C17Rik|2610100E13|AI451237|AI551093|BGG1|GGT1 protein geranylgeranyltransferase type I, beta subunit protein-coding common_peak1_207_2418_-0.404936875779924_11.03772661609_18.2261991072251 chr9 103364160 103365733 + 18.2261991072251 NA promoter-TSS (NM_001134427) promoter-TSS (NM_001134427) 33 NM_001134427 321022 Mm.261025 NM_175565 ENSMUSG00000032803 Cdv3 2510010F10Rik|C230084J24Rik|C79446|TPP36 carnitine deficiency-associated gene expressed in ventricle 3 protein-coding common_peak1_16_247_-1.5506600494127_7.17886628568052_18.221900907218 chr4 108350082 108350406 + 18.221900907218 NA Intergenic Intergenic 22092 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding unique_peak1_19_12_2.99069450948968_5.19578697288593_18.2116369535607-2 chr5 140936371 140936974 + 18.2116369535607 NA intron (NM_175362, intron 1 of 24) intron (NM_175362, intron 1 of 24) 63924 NM_175362 108723 Mm.46187 NM_175362 ENSMUSG00000036526 Card11 0610008L17Rik|2410011D02Rik|BIMP3|CARMA1 caspase recruitment domain family, member 11 protein-coding unique_peak1_19_12_2.99069450948968_5.19578697288593_18.2116369535607 chr4 59008094 59008703 + 18.2116369535607 NA intron (NM_001033165, intron 1 of 3) intron (NM_001033165, intron 1 of 3) 5205 NM_001033165 72429 Mm.317801 NM_001033165 ENSMUSG00000070972 Dnajc25 2010109C08Rik|2010203O07Rik DnaJ heat shock protein family (Hsp40) member C25 protein-coding common_peak2_83_958_-0.67468773884692_9.56804313559467_18.2114150272982 chr1 184065766 184068194 + 18.2114150272982 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 32519 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak2_296_2186_0.370851474919355_11.2801632425078_18.2002017657888 chr9 111055269 111059096 + 18.2002017657888 NA promoter-TSS (NM_017466) promoter-TSS (NM_017466) 62 NM_001302377 54199 Mm.7336 NM_017466 ENSMUSG00000043953 Ccrl2 1810047I05Rik|Ackr5|CCR11|Cmkbr1l2|E01|L-CCR chemokine (C-C motif) receptor-like 2 protein-coding common_peak2_72_837_-0.728487407313724_9.34656273004249_18.199599019603 chr6 30325594 30327484 + 18.199599019603 NA Intergenic MTE2b|LTR|ERVL-MaLR -22000 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak1_114_542_0.701758003167468_9.4356873893881_18.1935066886819 chr18 66458200 66459489 + 18.1935066886819 NA intron (NM_021451, intron 1 of 2) CpG 240 NM_021451 58801 Mm.271878 NM_021451 ENSMUSG00000024521 Pmaip1 Noxa phorbol-12-myristate-13-acetate-induced protein 1 protein-coding unique_peak2_6_143_-2.3365848737971_6.00163256454376_18.1898916783439 chr17 56118411 56119295 + 18.1898916783439 NA TTS (NM_029796) TTS (NM_029796) -1305 NM_025874 66968 Mm.254985 NM_025874 ENSMUSG00000011305 Plin5 2310076L09Rik|AI415325|AW109675|Lsdp5|MLDP|PAT-1 perilipin 5 protein-coding common_peak1_131_1503_-0.524044281644047_10.2925667108556_18.1892681738057 chr18 73702876 73704435 + 18.1892681738057 NA promoter-TSS (NM_008540) promoter-TSS (NM_008540) 86 NM_008540 17128 Mm.100399 NM_008540 ENSMUSG00000024515 Smad4 AW743858|D18Wsu70e|DPC4|Madh4 SMAD family member 4 protein-coding common_peak1_61_193_1.09338167373353_8.14660367905389_18.1814037435717 chr12 21111686 21112661 + 18.1814037435717 NA intron (NM_001135192, intron 1 of 28) CpG 417 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding common_peak2_273_3253_-0.345048667951311_11.4954742016969_18.1736155747127 chr3 138142794 138145278 + 18.1736155747127 NA promoter-TSS (NM_001163457) promoter-TSS (NM_001163457) 498 NM_175389 108943 Mm.471692 NM_175389 ENSMUSG00000004127 Trmt10a 3110023L08Rik|AA794508|Rg9mtd2|Rnmtd2 tRNA methyltransferase 10A protein-coding common_peak1_112_1283_-0.570909988949902_10.0409744926474_18.1717049124019 chr9 111271724 111272798 + 18.1717049124019 NA promoter-TSS (NM_026810) promoter-TSS (NM_026810) 416 NM_175266 77781 Mm.209005 NM_175266 ENSMUSG00000046785 Epm2aip1 A930003G21Rik|mKIAA0766 EPM2A (laforin) interacting protein 1 protein-coding unique_peak2_29_380_-1.16499075489562_7.99115181004551_18.1621317377143 chr9 40996349 40997950 + 18.1621317377143 NA intron (NM_001281954, intron 1 of 9) A-rich|Low_complexity|Low_complexity 7479 NM_001281954 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak1_27_359_-1.20528834631175_7.8892089231738_18.1570991893135 chr2 167345229 167345848 + 18.1570991893135 NA intron (NM_019835, intron 1 of 8) intron (NM_019835, intron 1 of 8) 3640 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak1_27_359_-1.20528834631175_7.8892089231738_18.1570991893135-2 chr4 62592584 62593317 + 18.1570991893135 NA intron (NM_019492, intron 3 of 19) B1_Mus1|SINE|Alu -26722 NM_001081650 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_155_865_0.567944857253849_10.0421956433536_18.1548572164723 chr16 27388566 27389806 + 18.1548572164723 NA intron (NM_001289436, intron 1 of 11) CpG 230 NM_001289436 67501 Mm.258985 NM_026202 ENSMUSG00000038127 Ccdc50 C3orf6 coiled-coil domain containing 50 protein-coding common_peak2_293_2156_0.372812603089869_11.2612167627054_18.1544420838998 chr13 20182933 20186079 + 18.1544420838998 NA intron (NM_080288, intron 1 of 21) intron (NM_080288, intron 1 of 21) 93999 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding unique_peak2_3_108_-2.92515568402447_5.30560648276469_18.1463482164363 chr1 87846532 87847316 + 18.1463482164363 NA Intergenic Intergenic -6363 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak2_52_620_-0.86270769277737_8.8470956118318_18.1457710046372 chr12 100158896 100160221 + 18.1457710046372 NA promoter-TSS (NM_001290303) promoter-TSS (NM_001290303) 95 NM_001290303 217827 Mm.224076 NM_183155 ENSMUSG00000021179 Nrde2 6720454P05Rik nrde-2 necessary for RNA interference, domain containing protein-coding common_peak1_61_717_-0.794545517902389_9.09056727487186_18.1451247588016 chr17 33939891 33941034 + 18.1451247588016 NA promoter-TSS (NM_010385) promoter-TSS (NM_010385) -119 NM_010385 14976 Mm.2948 NM_010385 ENSMUSG00000024309 Pfdn6 H-2Ke2|H2-Ke2|Ke-2 prefoldin subunit 6 protein-coding common_peak1_35_65_1.68690355370057_6.88784589620874_18.1420134624154 chr17 31038368 31039052 + 18.1420134624154 NA Intergenic Intergenic -18984 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak1_83_327_0.873147261553127_8.79412563539465_18.1330168342943 chr11 58867037 58868309 + 18.1330168342943 NA intron (NM_172403, intron 1 of 4) intron (NM_172403, intron 1 of 4) 433 NM_172403 69944 Mm.32118 NM_172403 ENSMUSG00000020491 2810021J22Rik AI449137 RIKEN cDNA 2810021J22 gene protein-coding common_peak1_34_431_-1.07344178763993_8.2181666083435_18.1266266412696 chr12 84243269 84243888 + 18.1266266412696 NA Intergenic Intergenic -24697 NM_001163501 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak1_132_680_0.632389324650289_9.72770565033722_18.1259453463844 chr13 67483541 67484669 + 18.1259453463844 NA intron (NM_001076791, intron 1 of 3) intron (NM_001076791, intron 1 of 3) 148 NM_001076791 408067 Mm.315879 NM_001076791 ENSMUSG00000059839 Zfp874b 9630025I21Rik|Rslcan16 zinc finger protein 874b protein-coding common_peak2_97_421_0.782389359389855_9.11229386840211_18.1259436645801 chr3 51224230 51225534 + 18.1259436645801 NA 5' UTR (NM_009834, exon 1 of 3) 5' UTR (NM_009834, exon 1 of 3) 435 NM_009834 12457 Mm.86541 NM_009834 ENSMUSG00000023087 Noct AU043840|Ccr4|Ccrn4l nocturnin protein-coding common_peak2_91_1046_-0.640360300464586_9.71186557669852_18.1230680454533 chr9 14274297 14276140 + 18.1230680454533 NA Intergenic Intergenic -1083 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_199_1247_0.480449906833204_10.5256271722789_18.1175727302937 chr10 93539281 93542170 + 18.1175727302937 NA promoter-TSS (NM_175488) promoter-TSS (NM_175488) 93 NM_175488 237465 Mm.477086 NM_175488 ENSMUSG00000036168 Ccdc38 4933417K05Rik coiled-coil domain containing 38 protein-coding unique_peak1_26_32_2.17781344748114_6.13330084309902_18.117190459188 chr14 34501933 34502519 + 18.117190459188 NA intron (NM_009758, intron 1 of 12) CpG 320 NM_009758 12166 Mm.237825 NM_009758 ENSMUSG00000021796 Bmpr1a 1110037I22Rik|ALK3|AU045487|BMPR-IA|Bmpr bone morphogenetic protein receptor, type 1A protein-coding common_peak2_174_1026_0.525330835083659_10.26688588386_18.1157961890235 chr3 31060353 31062636 + 18.1157961890235 NA Intergenic Intergenic 22528 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA common_peak1_77_289_0.919646670779283_8.63973242540458_18.1103724096514 chr14 104521852 104523117 + 18.1103724096514 NA intron (NM_026047, intron 1 of 5) CpG 182 NM_026047 72486 Mm.291811 NM_026047 ENSMUSG00000022120 Rnf219 2610206B13Rik|2810449K13Rik|AI451544 ring finger protein 219 protein-coding common_peak1_92_1057_-0.636307191226436_9.72897031650081_18.1051033244379 chr8 95807607 95808106 + 18.1051033244379 NA promoter-TSS (NM_178078) promoter-TSS (NM_178078) -394 NM_001205226 234594 Mm.259220 NM_153164 ENSMUSG00000036550 Cnot1 6030411K04Rik|AA815922|D830048B13 CCR4-NOT transcription complex, subunit 1 protein-coding common_peak1_109_506_0.72206139256893_9.34687263328781_18.1040173888327 chr17 4907711 4908911 + 18.1040173888327 NA Intergenic CpG -86763 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_72_258_0.965510738699074_8.49956365703609_18.1026663905702 chr11 97050485 97051532 + 18.1026663905702 NA intron (NM_001310509, intron 1 of 22) intron (NM_001310509, intron 1 of 22) 188 NM_001081434 71240 Mm.190450 NM_001081434 ENSMUSG00000038534 Osbpl7 4933437E18Rik oxysterol binding protein-like 7 protein-coding unique_peak2_19_276_-1.42260793841841_7.40243819683998_18.1002785690462 chr19 9123427 9124986 + 18.1002785690462 NA intron (NM_025610, intron 2 of 6) L1VL2|LINE|L1 11360 NM_025610 66514 Mm.272847 NM_025610 ENSMUSG00000024654 Asrgl1 2410004D18Rik|ALP|ALP1|AU040643|AW060375 asparaginase like 1 protein-coding common_peak2_809_8463_0.193936068943531_13.1440919465858_18.0974196155559 chr11 30188933 30199339 + 18.0974196155559 NA intron (NM_175836, intron 1 of 34) (CA)n|Simple_repeat|Simple_repeat 4121 NM_009260 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak1_60_706_-0.801046953762427_9.06504292792819_18.0955503313302 chr9 20961758 20962863 + 18.0955503313302 NA Intergenic B1_Mm|SINE|Alu -2422 NM_001199432 13433 Mm.128580 NM_010066 ENSMUSG00000004099 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI DNA methyltransferase (cytosine-5) 1 protein-coding common_peak2_57_171_1.14901087099683_8.00077019020051_18.0939673051332 chr6 83571752 83572642 + 18.0939673051332 NA intron (NM_024239, intron 1 of 9) intron (NM_024239, intron 1 of 9) 307 NM_024239 70527 Mm.32801 NM_024239 ENSMUSG00000006906 Stambp 5330424L14Rik|5730422L11Rik|AW107289|Amsh|mKIAA4198 STAM binding protein protein-coding common_peak1_409_3411_0.299759231811811_11.8862815472242_18.0939458680948 chr17 45555622 45559072 + 18.0939458680948 NA intron (NM_008690, intron 1 of 5) intron (NM_008690, intron 1 of 5) 1647 NM_001304956 18037 Mm.57043 NM_008690 ENSMUSG00000023947 Nfkbie I-kappa-B-epsilon|IKBE|IkB-E|NF-kappa-BIE|ikB-epsilon nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon protein-coding unique_peak1_16_6_3.59618133891657_4.60544559151589_18.0915090878835 chr7 24254448 24255008 + 18.0915090878835 NA promoter-TSS (NM_018791) promoter-TSS (NM_018791) -66 NM_018791 54678 Mm.468052 NM_018791 ENSMUSG00000030486 Zfp108 - zinc finger protein 108 protein-coding common_peak1_85_978_-0.66282556816339_9.603752265522_18.0866929870619 chr17 27027626 27028653 + 18.0866929870619 NA intron (NM_007523, intron 1 of 5) intron (NM_007523, intron 1 of 5) 487 NM_007523 12018 Mm.2443 NM_007523 ENSMUSG00000057789 Bak1 Bak|N-BAK1|N-Bak BCL2-antagonist/killer 1 protein-coding common_peak1_28_369_-1.18271814600374_7.94002238751444_18.0833079384746-2 chr12 73710197 73710852 + 18.0833079384746 NA intron (NM_001313977, intron 10 of 14) intron (NM_001313977, intron 10 of 14) 125728 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_28_369_-1.18271814600374_7.94002238751444_18.0833079384746 chr11 62551514 62552209 + 18.0833079384746 NA intron (NM_001313984, intron 1 of 1) intron (NM_001313984, intron 1 of 1) 130 NM_001313984 22187 Mm.371592 NM_011664 ENSMUSG00000019505 Ubb AL033289|Rps27a|Uba52|Ubb2|Ubc ubiquitin B protein-coding common_peak1_156_874_0.564336427685959_10.0553074205627_18.0814918778878 chr4 106315380 106316853 + 18.0814918778878 NA promoter-TSS (NM_183225) promoter-TSS (NM_183225) -97 NM_183225 329908 Mm.234544 NM_183225 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 protein-coding common_peak1_151_833_0.576297563511295_9.99205235520031_18.0785670195777 chr7 81762347 81763831 + 18.0785670195777 NA intron (NM_025997, intron 1 of 2) CpG 136 NM_025997 67148 Mm.241472 NM_025997 ENSMUSG00000038646 Fam103a1 2410047I02Rik|2610204K14Rik|RAM family with sequence similarity 103, member A1 protein-coding unique_peak1_24_26_2.33112768997292_5.92045134714993_18.0770555229136 chr3 35921040 35921667 + 18.0770555229136 NA intron (NM_001205361, intron 1 of 6) intron (NM_001205361, intron 1 of 6) 8721 NM_033623 114893 Mm.374810 NM_033623 ENSMUSG00000027708 Dcun1d1 Rp42|SCCRO|Tes3|pTes3 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) protein-coding common_peak1_376_3042_0.316389611072806_11.729473424051_18.0748226002631 chr10 67547888 67550223 + 18.0748226002631 NA promoter-TSS (NM_001005419) promoter-TSS (NM_001005419) -100 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding unique_peak2_64_749_-0.773832265050347_9.16383065285807_18.0715392011981 chr9 118363321 118366621 + 18.0715392011981 NA Intergenic B3|SINE|B2 -64868 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak2_353_2791_0.32919000617181_11.6116782292956_18.0618384335652 chr1 21379974 21388223 + 18.0618384335652 NA intron (NM_001113187, intron 1 of 2) intron (NM_001113187, intron 1 of 2) 542 NM_001113187 98582 Mm.326336 NM_001113187 ENSMUSG00000085079 Khdc1b AU014713|AU015226|AU024076|AY238603|C85331|C86372|C88118|Khdc1|Khdc1c KH domain containing 1B protein-coding common_peak1_44_105_1.39825818300143_7.42704954606392_18.061807289178 chr7 132723323 132724121 + 18.061807289178 NA intron (NM_175268, intron 4 of 4) intron (NM_175268, intron 4 of 4) 63213 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_50_599_-0.881147913368425_8.78824473381167_18.0602774345871 chr17 29502233 29503034 + 18.0602774345871 NA Intergenic Intergenic 11588 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_73_264_0.956547412947204_8.52812225592416_18.0587200214705 chr9 96196335 96196997 + 18.0587200214705 NA intron (NM_178667, intron 1 of 13) CpG 391 NM_001184706 211586 Mm.17977 NM_178667 ENSMUSG00000032411 Tfdp2 1110029I05Rik|A330080J22Rik|DP-3|DP3 transcription factor Dp 2 protein-coding common_peak2_267_1895_0.395025073624177_11.0862557857103_18.0528286404428 chr17 88111042 88114583 + 18.0528286404428 NA Intergenic Intergenic -12700 NM_001190356 225058 Mm.312053 NM_001190356 Gm4832 EG225058 predicted gene 4832 protein-coding common_peak1_17_256_-1.50093918732121_7.25515495553327_18.0463085596852 chr3 154209997 154210553 + 18.0463085596852 NA intron (NM_001081263, intron 3 of 21) L1MA9|LINE|L1 120285 NM_010713 16875 Mm.15530 NM_010713 ENSMUSG00000096225 Lhx8 L3|Lhx7 LIM homeobox protein 8 protein-coding common_peak1_61_716_-0.792534792781241_9.08956191231128_18.0421491561752 chr4 6217575 6218918 + 18.0421491561752 NA 3' UTR (NM_026534, exon 8 of 8) 3' UTR (NM_026534, exon 8 of 8) 27141 NM_026534 68053 Mm.404043 NM_026534 ENSMUSG00000028243 Ubxn2b 3110003A22Rik|6430407D20Rik|AI451665|p37 UBX domain protein 2B protein-coding common_peak1_441_3779_0.284982968126926_12.0266620031719_18.0416401745429 chr3 65957043 65960070 + 18.0416401745429 NA promoter-TSS (NM_019937) promoter-TSS (NM_019937) -331 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak2_91_1045_-0.638981709780719_9.71117628135658_18.037610768788 chr4 134917550 134920762 + 18.037610768788 NA Intergenic A-rich|Low_complexity|Low_complexity -4240 NM_027935 71817 Mm.88349 NM_027935 ENSMUSG00000028822 Tmem50a 3200001F09Rik|CAM|Smp1 transmembrane protein 50A protein-coding common_peak1_52_619_-0.860382639831126_8.84593308535868_18.035197094995 chr3 88684873 88685637 + 18.035197094995 NA promoter-TSS (NM_028814) promoter-TSS (NM_028814) -539 NM_028814 74200 Mm.251800 NM_028814 ENSMUSG00000028060 2810403A07Rik A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907 RIKEN cDNA 2810403A07 gene protein-coding common_peak1_52_619_-0.860382639831126_8.84593308535868_18.035197094995-2 chr4 126197730 126198734 + 18.035197094995 NA intron (NM_146153, intron 1 of 10) intron (NM_146153, intron 1 of 10) 4478 NM_146153 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak2_82_321_0.87858899105373_8.77021137364148_18.0341619299963 chr13 76098130 76099476 + 18.0341619299963 NA promoter-TSS (NM_001081352) promoter-TSS (NM_001081352) 69 NM_001081352 218343 Mm.277964 NM_001081352 ENSMUSG00000033991 Ttc37 mKIAA0372 tetratricopeptide repeat domain 37 protein-coding common_peak2_107_1225_-0.584311074478475_9.96758772645154_18.0259491684043 chr8 123112488 123115440 + 18.0259491684043 NA Intergenic Intergenic -3410 NM_170684 102278 Mm.36434 NM_170684 ENSMUSG00000034796 Cpne7 AW047065 copine VII protein-coding common_peak1_31_50_1.85044023234003_6.59764545814151_18.0205179976178 chr14 75189573 75190223 + 18.0205179976178 NA intron (NM_008879, intron 2 of 16) L1M1|LINE|L1 -52389 NM_019775 56373 Mm.24242 NM_019775 ENSMUSG00000021999 Cpb2 1110032P04Rik|4930405E17Rik|AI255929|CPR|Cpu|TAFI carboxypeptidase B2 (plasma) protein-coding common_peak1_150_1723_-0.483023674103547_10.5100322220373_18.0204094033216 chr13 23570231 23571986 + 18.0204094033216 NA promoter-TSS (NM_178196) promoter-TSS (NM_178196) 112 NM_178187 319166 Mm.261665 NM_178187 ENSMUSG00000069272 Hist1h2ae 1190022L06 histone cluster 1, H2ae protein-coding common_peak1_125_1431_-0.535594306126118_10.2160186242012_18.0176011022648 chr5 115516075 115516865 + 18.0176011022648 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 9794 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak1_324_3917_-0.310881575056372_11.7804608947394_18.0162892553464 chr7 102265801 102268966 + 18.0162892553464 NA promoter-TSS (NM_009287) promoter-TSS (NM_009287) -441 NM_009287 20866 Mm.645 NM_009287 ENSMUSG00000030987 Stim1 SIM stromal interaction molecule 1 protein-coding common_peak1_27_358_-1.20127528380513_7.88720239192049_18.0129654851817 chrX 73718091 73718745 + 18.0129654851817 NA promoter-TSS (NM_001313698) promoter-TSS (NM_001313698) -603 NM_001313698 27061 Mm.17 NM_012060 ENSMUSG00000002015 Bcap31 Bap31 B cell receptor associated protein 31 protein-coding common_peak1_88_1011_-0.649975205930122_9.65800597172925_18.0122265221528 chr17 50512623 50513945 + 18.0122265221528 NA intron (NM_013880, intron 1 of 5) intron (NM_013880, intron 1 of 5) 3737 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak1_33_420_-1.08752785090587_8.17391249761346_18.0110993500174 chr5 21414075 21414787 + 18.0110993500174 NA intron (NM_029195, intron 1 of 18) intron (NM_029195, intron 1 of 18) 10246 NM_029195 75172 Mm.426695 NM_029195 ENSMUSG00000064280 Ccdc146 4930528G09Rik|mKIAA1505 coiled-coil domain containing 146 protein-coding common_peak1_294_2169_0.370152664588304_11.268555659626_18.008330367853 chr17 30575431 30577224 + 18.008330367853 NA promoter-TSS (NM_027060) promoter-TSS (NM_027060) -40 NM_027060 224671 Mm.41220 NM_027060 ENSMUSG00000062202 Btbd9 1700023F20Rik|4930402L05|AI464421 BTB (POZ) domain containing 9 protein-coding common_peak2_136_1559_-0.510992757214751_10.3518339351422_18.007154790727 chr18 73702419 73704560 + 18.007154790727 NA 5' UTR (NM_008540, exon 1 of 12) 5' UTR (NM_008540, exon 1 of 12) 252 NM_008540 17128 Mm.100399 NM_008540 ENSMUSG00000024515 Smad4 AW743858|D18Wsu70e|DPC4|Madh4 SMAD family member 4 protein-coding common_peak2_116_1327_-0.55796146558578_10.096058698554_18.0055591921649 chr13 113118973 113122005 + 18.0055591921649 NA Intergenic Intergenic -15587 NR_131045 76720 Mm.54263 NR_131045 1700084D21Rik - RIKEN cDNA 1700084D21 gene ncRNA common_peak1_101_1156_-0.601890060793677_9.87522811871065_18.0018858048006 chr16 18497962 18499412 + 18.0018858048006 NA promoter-TSS (NM_023120) promoter-TSS (NM_023120) -26 NM_001081682 13972 Mm.236139 NM_023120 ENSMUSG00000000884 Gnb1l ESTM55|Gm16314|Me49f07|OTTMUSG00000033458|Wdr14|Wdvcf guanine nucleotide binding protein (G protein), beta polypeptide 1-like protein-coding common_peak2_59_183_1.11170678772705_8.07941534992054_17.9951366636512 chr10 120201037 120202417 + 17.9951366636512 NA promoter-TSS (NM_028679) promoter-TSS (NM_028679) -190 NM_028679 73914 Mm.146194 NM_028679 ENSMUSG00000020227 Irak3 4833428C18Rik|AI563835|IRAK-M interleukin-1 receptor-associated kinase 3 protein-coding unique_peak1_36_70_1.63003653170673_6.96476538535805_17.9941619294047 chr10 61254138 61254906 + 17.9941619294047 NA intron (NM_001081127, intron 2 of 21) intron (NM_001081127, intron 2 of 21) 18916 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak2_91_381_0.814256598430475_8.98455712725099_17.9931077961002 chr10 39405982 39408306 + 17.9931077961002 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 37345 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_220_1442_0.447685591557807_10.7186983802701_17.9901734978947 chr10 93122919 93125227 + 17.9901734978947 NA Intergenic Intergenic -36803 NM_146239 237459 Mm.217404 NM_146239 ENSMUSG00000020015 Cdk17 6430598J10Rik|Pctk2 cyclin-dependent kinase 17 protein-coding common_peak2_655_6412_0.221108817973056_12.7573381008243_17.9873432367952 chr2 3722669 3732973 + 17.9873432367952 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 14363 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_61_194_1.08596420217105_8.15031241483514_17.9855679920576 chr9 63747405 63748473 + 17.9855679920576 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 10055 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_269_3197_-0.346028758576061_11.4699398441923_17.9702534481098 chr10 26797749 26800551 + 17.9702534481098 NA intron (NM_176837, intron 1 of 14) intron (NM_176837, intron 1 of 14) 26638 NM_176837 73910 Mm.356496 NM_176837 ENSMUSG00000039031 Arhgap18 4833419J07Rik|AI314906|AI843501 Rho GTPase activating protein 18 protein-coding common_peak1_196_1222_0.482897928097913_10.4976576525763_17.9537822512652 chr12 108794236 108795269 + 17.9537822512652 NA intron (NM_009537, intron 1 of 4) CpG-3499 1441 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak2_135_705_0.61984882126206_9.77344878390221_17.9523901893526 chr13 67483523 67484946 + 17.9523901893526 NA promoter-TSS (NM_001076791) promoter-TSS (NM_001076791) 19 NM_001076791 408067 Mm.315879 NM_001076791 ENSMUSG00000059839 Zfp874b 9630025I21Rik|Rslcan16 zinc finger protein 874b protein-coding common_peak1_26_347_-1.22073592900913_7.83257553134416_17.9520780517225 chr17 35998585 35999157 + 17.9520780517225 NA intron (NR_015618, intron 1 of 1) IMPB_01|Satellite|Satellite 4367 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA common_peak2_168_1937_-0.452539006885671_10.6940833519722_17.951542891986 chr17 26714940 26717219 + 17.951542891986 NA intron (NM_029870, intron 1 of 8) CpG 429 NM_029870 77128 Mm.275414 NM_029870 ENSMUSG00000048249 Crebrf A930001N09Rik|LRF CREB3 regulatory factor protein-coding common_peak2_631_6104_0.226160444797619_12.6888558022736_17.949392950039 chr16 91441178 91453766 + 17.949392950039 NA Intergenic L1M2a|LINE|L1 -17632 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA unique_peak1_32_54_1.79596023413622_6.67933983059277_17.9343244387851 chr11 76587544 76588166 + 17.9343244387851 NA Intergenic Intergenic -10116 NM_198894 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_40_492_-0.984000571312486_8.45344355072167_17.9294326583717 chr10 81349474 81351187 + 17.9294326583717 NA promoter-TSS (NM_001163165) promoter-TSS (NM_001163165) 96 NM_001163165 15353 Mm.38474 NM_010440 ENSMUSG00000020232 Hmg20b AW610687|BRAF35|Hmgx2|Hmgxb2|Smarce1r high mobility group 20B protein-coding common_peak1_80_922_-0.683844754652895_9.50826446031933_17.9268182990779 chr2 25426010 25427062 + 17.9268182990779 NA TTS (NM_001177367) TTS (NM_001177367) -2138 NM_007379 11305 Mm.2210 NM_007379 ENSMUSG00000026944 Abca2 AI413825|Abc2|D2H0S1474E|mKIAA1062 ATP-binding cassette, sub-family A (ABC1), member 2 protein-coding common_peak1_142_1628_-0.497580541943091_10.420980617554_17.9238218363209 chr10 80167740 80168808 + 17.9238218363209 NA intron (NM_007705, intron 1 of 6) CpG 433 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak2_117_1338_-0.55480152909613_10.1095394807762_17.9214268163251 chr17 56763869 56765604 + 17.9214268163251 NA promoter-TSS (NM_144858) promoter-TSS (NM_144858) -15 NM_144858 224907 Mm.293973 NM_144858 ENSMUSG00000007603 Dus3l AI662135|AW557805 dihydrouridine synthase 3-like (S. cerevisiae) protein-coding common_peak1_84_966_-0.66573023162435_9.58450696366467_17.9148147060589 chr9 21133400 21134478 + 17.9148147060589 NA Intergenic B2_Mm1a|SINE|B2 -2664 NM_001205312 54721 Mm.20249 NM_018793 ENSMUSG00000032175 Tyk2 JTK1 tyrosine kinase 2 protein-coding common_peak2_131_674_0.631800878095397_9.71464413098589_17.9106061412261 chr6 99025597 99029070 + 17.9106061412261 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) 965 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_39_482_-0.998132840018641_8.41681295882645_17.9080159280421-2 chr8 72475326 72476002 + 17.9080159280421 NA promoter-TSS (NM_138585) promoter-TSS (NM_138585) -431 NM_138585 27967 Mm.30136 NM_138585 ENSMUSG00000052488 Cherp 5730408I11Rik|D8Wsu96e|DAN16|Scaf6 calcium homeostasis endoplasmic reticulum protein protein-coding common_peak1_39_482_-0.998132840018641_8.41681295882645_17.9080159280421 chr1 182368447 182369165 + 17.9080159280421 NA Intergenic Intergenic -27200 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_41_503_-0.973192968515061_8.49068343924239_17.9070057461622 chr11 98476489 98477346 + 17.9070057461622 NA intron (NM_011771, intron 7 of 7) intron (NM_011771, intron 7 of 7) 30083 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak1_41_503_-0.973192968515061_8.49068343924239_17.9070057461622-2 chr7 101310151 101310820 + 17.9070057461622 NA Intergenic Intergenic -8397 NM_001111111 73683 Mm.275744 NM_001111111 ENSMUSG00000047767 Atg16l2 2410118P20Rik autophagy related 16-like 2 (S. cerevisiae) protein-coding common_peak1_58_178_1.12171062777757_8.04467109115304_17.9061700002644 chr1 65186533 65187343 + 17.9061700002644 NA promoter-TSS (NM_001111320) promoter-TSS (NM_001111320) 253 NM_001310624 18711 Mm.38370 NM_011086 ENSMUSG00000025949 Pikfyve 5230400C17Rik|Pip5k|Pip5k3|Pipk5k3|PipkIII|p235 phosphoinositide kinase, FYVE finger containing protein-coding unique_peak2_3_107_-2.91185886141101_5.29895807145796_17.898486374528-2 chr15 75924359 75925260 + 17.898486374528 NA 3' UTR (NM_031201, exon 11 of 11) 3' UTR (NM_031201, exon 11 of 11) -3249 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik pyrroline-5-carboxylate reductase-like protein-coding unique_peak2_3_107_-2.91185886141101_5.29895807145796_17.898486374528-3 chr19 58095517 58096429 + 17.898486374528 NA intron (NM_181415, intron 28 of 28) intron (NM_181415, intron 28 of 28) 44806 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA unique_peak2_3_107_-2.91185886141101_5.29895807145796_17.898486374528 chr1 36911148 36911999 + 17.898486374528 NA intron (NM_018872, intron 1 of 40) intron (NM_018872, intron 1 of 40) 27954 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding common_peak1_161_1853_-0.463471134446296_10.6246899614024_17.8982673683067 chr1 74248469 74250622 + 17.8982673683067 NA intron (NM_029711, intron 3 of 9) intron (NM_029711, intron 3 of 9) 12995 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak1_253_2990_-0.357589189758952_11.3676176002399_17.8976067131267 chr2 166708629 166711676 + 17.8976067131267 NA intron (NR_105783, intron 2 of 2) intron (NR_105783, intron 2 of 2) 3680 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding common_peak2_20_286_-1.38743228287719_7.47119078523709_17.8954954944087 chr8 57416015 57417598 + 17.8954954944087 NA Intergenic Intergenic -39117 NM_009136 20284 Mm.12886 NM_009136 ENSMUSG00000031610 Scrg1 AW124307 scrapie responsive gene 1 protein-coding unique_peak1_29_43_1.94922481396041_6.4340440256175_17.8910237638697 chr16 58496123 58496829 + 17.8910237638697 NA intron (NM_018784, intron 2 of 10) intron (NM_018784, intron 2 of 10) 26836 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding common_peak1_226_2649_-0.381831897350192_11.1808606956628_17.889805751374 chr7 127875630 127877461 + 17.889805751374 NA 5' UTR (NM_146259, exon 1 of 3) 5' UTR (NM_146259, exon 1 of 3) 278 NM_146259 244219 Mm.207872 NM_146259 ENSMUSG00000049728 Zfp668 BC030314|E130018B19Rik|Znf668 zinc finger protein 668 protein-coding common_peak1_175_1037_0.520043947895138_10.2796127023054_17.8875103648557 chr17 45745544 45747614 + 17.8875103648557 NA Intergenic Intergenic -12735 NM_028164 72240 Mm.482897 NM_028164 ENSMUSG00000094690 1600014C23Rik - RIKEN cDNA 1600014C23 gene protein-coding common_peak1_106_486_0.731192457273432_9.29337419071906_17.8844971777058 chr17 46282062 46283500 + 17.8844971777058 NA intron (NM_028751, intron 1 of 10) intron (NM_028751, intron 1 of 10) 245 NM_001252475 74094 Mm.284594 NM_028751 ENSMUSG00000012296 Tjap1 0610041D19Rik|AI415281|AW121008|Pilt|Tjp4 tight junction associated protein 1 protein-coding common_peak2_54_639_-0.840637076501446_8.90160955663664_17.8782061222559 chr6 145114921 145117137 + 17.8782061222559 NA intron (NM_001281980, intron 1 of 18) intron (NM_001281980, intron 1 of 18) 393 NM_001281981 16970 Mm.843 NM_008511 ENSMUSG00000030263 Lrmp D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1 lymphoid-restricted membrane protein protein-coding common_peak2_178_2057_-0.437482681471201_10.7882859261584_17.8732672649636 chr8 105807304 105813629 + 17.8732672649636 NA intron (NM_145824, intron 2 of 13) intron (NM_145824, intron 2 of 13) 16884 NM_145824 74334 Mm.4206 NM_145824 ENSMUSG00000037415 Ranbp10 4432417N03Rik RAN binding protein 10 protein-coding common_peak1_248_2926_-0.36156664508712_11.3344237078652_17.8679203840181 chr12 108791770 108794226 + 17.8679203840181 NA promoter-TSS (NM_009537) promoter-TSS (NM_009537) -313 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak1_308_2316_0.357640071065202_11.3568623643974_17.8659464151565 chr11 98943345 98946342 + 17.8659464151565 NA intron (NM_001177303, intron 1 of 8) intron (NM_001177303, intron 1 of 8) 5132 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_34_429_-1.06674713506593_8.2148192820565_17.8631776132858 chr8 117531844 117532593 + 17.8631776132858 NA intron (NM_172285, intron 2 of 32) intron (NM_172285, intron 2 of 32) 33927 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak1_76_284_0.921903431720962_8.61576982491259_17.8607628621226 chr18 77938366 77939152 + 17.8607628621226 NA intron (NM_001195633, intron 1 of 43) intron (NM_001195633, intron 1 of 43) 292 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak2_206_1314_0.465882752220415_10.5937884602899_17.8598228476449 chr11 115186093 115188966 + 17.8598228476449 NA promoter-TSS (NM_001033393) promoter-TSS (NM_001033393) 42 NM_001033393 320534 Mm.260587 NM_001033393 ENSMUSG00000045980 Tmem104 C630005D06Rik|mFLJ00021 transmembrane protein 104 protein-coding common_peak2_108_501_0.720198681578864_9.3316428947402_17.857577654383 chr13 73762965 73764881 + 17.857577654383 NA intron (NM_011390, intron 1 of 23) CpG 226 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak1_35_439_-1.05006204046564_8.25632869329184_17.8554605182094 chr11 68433501 68434136 + 17.8554605182094 NA intron (NM_177320, intron 1 of 18) ID_B1|SINE|B4 1693 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak2_143_770_0.5939352455167_9.88755467267339_17.853356587294 chr18 75386309 75388791 + 17.853356587294 NA intron (NM_001042660, intron 3 of 3) (CAG)n|Simple_repeat|Simple_repeat 20185 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_46_555_-0.915809985297489_8.66103608007476_17.8505397995424 chr11 76216737 76218096 + 17.8505397995424 NA promoter-TSS (NM_021294) promoter-TSS (NM_021294) 156 NM_177367 276919 Mm.482713 NM_177367 ENSMUSG00000049396 Gemin4 4932415L08Rik|AU015359 gem (nuclear organelle) associated protein 4 protein-coding common_peak1_46_555_-0.915809985297489_8.66103608007476_17.8505397995424 chr3 79181307 79182295 + 17.8505397995424 NA Intergenic Intergenic -31118 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA unique_peak2_45_544_-0.925039304384423_8.62759276747208_17.8464114263017 chr10 13552189 13553906 + 17.8464114263017 NA promoter-TSS (NM_001164195) promoter-TSS (NM_001164195) 95 NM_019961 56535 Mm.282711 NM_019961 ENSMUSG00000019809 Pex3 1700014F15Rik|2810027F19Rik|2900010N04Rik peroxisomal biogenesis factor 3 protein-coding common_peak2_233_1567_0.428980432832294_10.8292000605314_17.8372078367573 chr10 8516625 8519719 + 17.8372078367573 NA exon (NM_177387, exon 1 of 8) exon (NM_177387, exon 1 of 8) 653 NM_177387 338362 Mm.41163 NM_177387 ENSMUSG00000047712 Ust D930010O20Rik|UA2OST uronyl-2-sulfotransferase protein-coding common_peak1_249_1721_0.410863662804218_10.955301258799_17.8304756670601 chr3 30792650 30794147 + 17.8304756670601 NA intron (NM_027016, intron 1 of 7) CpG 522 NM_027016 69276 Mm.26017 NM_027016 ENSMUSG00000027706 Sec62 3100002M17Rik|AI844545|AW545092|Dtrp1|HTP1|Tloc1 SEC62 homolog (S. cerevisiae) protein-coding common_peak1_94_1076_-0.624332744268996_9.76063616240971_17.8217377277149 chr12 86894516 86895957 + 17.8217377277149 NA Intergenic Intergenic -10422 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_94_1076_-0.624332744268996_9.76063616240971_17.8217377277149-2 chr5 142906917 142907881 + 17.8217377277149 NA promoter-TSS (NM_007393) promoter-TSS (NM_007393) -645 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_72_833_-0.721584547059035_9.34311129991515_17.8184492634473 chr5 24738755 24739964 + 17.8184492634473 NA Intergenic Intergenic -8679 NM_001081441 269633 Mm.392539 NM_026621 ENSMUSG00000055235 Wdr86 2810046M22Rik|BC059069 WD repeat domain 86 protein-coding common_peak1_103_1177_-0.593477956816816_9.90538484542205_17.8128736700146 chr11 55468551 55469331 + 17.8128736700146 NA promoter-TSS (NM_013716) promoter-TSS (NM_013716) -811 NM_013716 27041 Mm.39631 NM_013716 ENSMUSG00000018583 G3bp1 AI849976|B430204O07|C87777|G3bp|mKIAA4115 GTPase activating protein (SH3 domain) binding protein 1 protein-coding common_peak1_103_1177_-0.593477956816816_9.90538484542205_17.8128736700146-2 chr17 56584884 56586123 + 17.8128736700146 NA promoter-TSS (NM_001029979) promoter-TSS (NM_001029979) 521 NM_001163300 224903 Mm.255066 NM_001163300 ENSMUSG00000071054 Safb 3110021E02Rik|5330423C17Rik|AU018122|D18386|E130307D12|HAP|HET|SAF-B1|SAFB1 scaffold attachment factor B protein-coding common_peak2_207_1324_0.463481533862076_10.603517411269_17.8116462219569 chr19 9103556 9108755 + 17.8116462219569 NA Intergenic Intergenic -18199 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_55_649_-0.831118846711535_8.92873648456005_17.8066629817143 chr7 101309767 101311479 + 17.8066629817143 NA Intergenic Intergenic -8535 NM_001111111 73683 Mm.275744 NM_001111111 ENSMUSG00000047767 Atg16l2 2410118P20Rik autophagy related 16-like 2 (S. cerevisiae) protein-coding common_peak2_56_167_1.15218129677141_7.96840807116447_17.8056422960977 chr12 102663520 102665057 + 17.8056422960977 NA intron (NM_172584, intron 2 of 9) B3|SINE|B2 20732 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_53_151_1.20089236458237_7.84837369573477_17.8026187096675 chr12 78218850 78219890 + 17.8026187096675 NA Intergenic L1MA6|LINE|L1 -7285 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak2_393_3237_0.304831657509087_11.8133030990571_17.8016017991225 chr8 46841841 46846304 + 17.8016017991225 NA intron (NM_008391, intron 7 of 8) MLT1E1A|LTR|ERVL-MaLR 104327 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_124_1416_-0.534503263903314_10.2013724109664_17.8006006539005 chr6 136803666 136804755 + 17.8006006539005 NA exon (NM_175652, exon 1 of 1) exon (NM_175652, exon 1 of 1) 221 NM_175652 320332 Mm.246720 NM_175652 ENSMUSG00000096010 Hist4h4 B130044J01Rik histone cluster 4, H4 protein-coding common_peak2_390_3203_0.306534614279229_11.7989257395483_17.7929231081826 chr17 35377514 35381217 + 17.7929231081826 NA promoter-TSS (NM_001143689) promoter-TSS (NM_001143689) -252 NM_001143689 15015 Mm.464284 NM_001143689 ENSMUSG00000035929 H2-Q4 H-2Q4|H2-Gs10|Qa-4|Qa4|Qat-4|Qb-1|Qb1 histocompatibility 2, Q region locus 4 protein-coding common_peak1_41_502_-0.970327634820672_8.48925077239519_17.7853675028983 chr15 89077894 89078939 + 17.7853675028983 NA intron (NM_026485, intron 1 of 9) intron (NM_026485, intron 1 of 9) 2352 NM_026485 67976 Mm.284710 NM_026485 ENSMUSG00000015363 Trabd 5730502D15Rik|AL023039 TraB domain containing protein-coding common_peak1_98_1120_-0.609116098991262_9.8260125133098_17.7790911906103 chr14 27350928 27352243 + 17.7790911906103 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) -9804 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_342_2677_0.333472100851845_11.5536762957502_17.7736150576916 chr7 25277303 25283485 + 17.7736150576916 NA intron (NM_001302811, intron 2 of 20) intron (NM_001302811, intron 2 of 20) -1785 NM_027882 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak1_75_278_0.929467513940416_8.5888550687994_17.7735864629817-2 chr8 64849137 64850631 + 17.7735864629817 NA promoter-TSS (NM_178633) promoter-TSS (NM_178633) 40 NM_178633 77113 Mm.350347 NM_178633 ENSMUSG00000031605 Klhl2 6030411N21Rik|ABP-KELCH|AU020744|Mav kelch-like 2, Mayven protein-coding common_peak1_75_278_0.929467513940416_8.5888550687994_17.7735864629817 chr4 135099773 135101282 + 17.7735864629817 NA Intergenic Intergenic -20118 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_140_1602_-0.499293106575244_10.3969121568669_17.7700152409297 chr11 97186547 97189330 + 17.7700152409297 NA promoter-TSS (NM_008379) promoter-TSS (NM_008379) -46 NM_008379 16211 Mm.251013 NM_008379 ENSMUSG00000001440 Kpnb1 AA409963|IPOB|Impnb karyopherin (importin) beta 1 protein-coding unique_peak2_198_1243_0.476211023716814_10.518876281989_17.768047005243 chr11 3156968 3160334 + 17.768047005243 NA intron (NM_030207, intron 10 of 32) intron (NM_030207, intron 10 of 32) 34630 NR_003517 236604 Mm.247625 NM_001004146 Pisd-ps1 - phosphatidylserine decarboxylase, pseudogene 1 pseudo common_peak1_752_7700_0.201101915670709_13.0113810391319_17.7547475176953 chr2 58154648 58161068 + 17.7547475176953 NA intron (NM_139200, intron 1 of 7) intron (NM_139200, intron 1 of 7) 2264 NM_139200 227929 Mm.273905 NM_139200 ENSMUSG00000026832 Cytip A130053M09Rik|AI462064|C80816|Cbp|Cybr|Pscdbp cytohesin 1 interacting protein protein-coding common_peak1_145_1661_-0.489773329198359_10.4538180021712_17.7496825575975 chr7 97748266 97749904 + 17.7496825575975 NA Intergenic PB1D9|SINE|Alu -10838 NM_175105 66333 Mm.29756 NM_175105 ENSMUSG00000042797 Aqp11 1700015P13Rik|AI648923|sjds aquaporin 11 protein-coding common_peak1_80_920_-0.680715263098458_9.50669971454211_17.7461023403944 chr7 100590826 100591785 + 17.7461023403944 NA intron (NR_003559, intron 1 of 7) intron (NR_003559, intron 1 of 7) -8175 NM_198831 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e mitochondrial ribosomal protein L48 protein-coding common_peak1_29_377_-1.15358599162337_7.98544942840939_17.7423757813657 chr2 180024898 180025607 + 17.7423757813657 NA exon (NM_177727, exon 1 of 9) exon (NM_177727, exon 1 of 9) 265 NM_177727 241846 Mm.21577 NM_177727 ENSMUSG00000039108 Lsm14b 9430078B04|BC040823 LSM family member 14B protein-coding common_peak1_90_376_0.813924329451384_8.96538287799435_17.741740603798 chr9 70760600 70761914 + 17.741740603798 NA intron (NM_007399, intron 9 of 15) intron (NM_007399, intron 9 of 15) 82256 NM_007399 11487 Mm.3037 NM_007399 ENSMUSG00000054693 Adam10 1700031C13Rik|MADM|kuz|kuzbanian a disintegrin and metallopeptidase domain 10 protein-coding common_peak1_128_1462_-0.524852367731254_10.2522878702729_17.7413472848073 chr5 24684127 24685719 + 17.7413472848073 NA promoter-TSS (NM_001305264) promoter-TSS (NM_001305264) -892 NM_016736 53312 Mm.5856 NM_016736 ENSMUSG00000028954 Nub1 4931404D21Rik|6330412F12Rik|BS4|NY-REN-18 negative regulator of ubiquitin-like proteins 1 protein-coding common_peak1_127_1450_-0.526741607382508_10.2394610003755_17.7405399587146 chr7 113368735 113370211 + 17.7405399587146 NA promoter-TSS (NM_133700) promoter-TSS (NM_133700) -134 NM_133700 68815 Mm.238034 NM_133700 ENSMUSG00000038187 Btbd10 1110056N09Rik|Gmrp1 BTB (POZ) domain containing 10 protein-coding common_peak1_346_4205_-0.297303138440425_11.8895815655116_17.7399828280143 chr11 68434146 68437746 + 17.7399828280143 NA intron (NM_177320, intron 1 of 18) intron (NM_177320, intron 1 of 18) 3821 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak1_56_659_-0.821823494695643_8.95541046689799_17.739420398475 chr15 76069698 76070416 + 17.739420398475 NA promoter-TSS (NM_134089) promoter-TSS (NM_134089) -273 NM_001310542 105782 Mm.25568 NM_134089 ENSMUSG00000022568 Scrib AI118201|CRIB|Crc|SCRIB1|Scrb1|mKIAA0147|vartul scribbled planar cell polarity protein-coding common_peak1_20_285_-1.38239669297989_7.46867299028844_17.736005980315 chr13 98691365 98691870 + 17.736005980315 NA intron (NM_001025606, intron 2 of 3) intron (NM_001025606, intron 2 of 3) 3214 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak1_18_264_-1.44948434605367_7.32510637642373_17.7330534598798 chr9 32516463 32516959 + 17.7330534598798 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 24741 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak2_67_778_-0.748718634714786_9.23112020070428_17.727732011794 chr12 86806569 86808909 + 17.727732011794 NA Intergenic Intergenic 73370 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak1_15_234_-1.58026368343983_7.08638510484508_17.7270918323702 chr10 19594845 19595270 + 17.7270918323702 NA intron (NM_010511, intron 1 of 6) intron (NM_010511, intron 1 of 6) 3099 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding unique_peak2_15_234_-1.58026368343983_7.08638510484508_17.7270918323702 chr9 46158107 46159615 + 17.7270918323702 NA intron (NM_027498, intron 4 of 24) intron (NM_027498, intron 4 of 24) -69769 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding common_peak1_35_438_-1.04677945647633_8.25468740129719_17.7257082770865 chr2 173794801 173795742 + 17.7257082770865 NA Intergenic Intergenic 57700 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding common_peak1_135_1543_-0.509083842734839_10.3379151159007_17.72230003329 chr11 6625407 6626871 + 17.72230003329 NA promoter-TSS (NM_134011) promoter-TSS (NM_134011) -72 NM_134011 21379 Mm.247761 NM_134011 ENSMUSG00000000384 Tbrg4 2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12|mKIAA0948 transforming growth factor beta regulated gene 4 protein-coding common_peak1_175_1039_0.517266863224565_10.2810012446407_17.7170982590993 chr18 80150041 80151853 + 17.7170982590993 NA intron (NM_175028, intron 1 of 3) intron (NM_175028, intron 1 of 3) 535 NM_175028 240442 Mm.26594 NM_175028 ENSMUSG00000053950 Adnp2 8430420L05Rik|BC024969|Kiaa0863|Zfp508|mKIAA0863 ADNP homeobox 2 protein-coding common_peak1_43_102_1.39990952669709_7.38645529053176_17.7122285680309 chr12 21370164 21371081 + 17.7122285680309 NA intron (NR_120376, intron 1 of 18) intron (NR_120376, intron 1 of 18) 3010 NR_102380 11491 Mm.27681 NM_009615 ENSMUSG00000052593 Adam17 CD156b|Tace a disintegrin and metallopeptidase domain 17 protein-coding common_peak1_223_2608_-0.382879545240458_11.1578414561972_17.7105736782703 chr19 6909140 6910937 + 17.7105736782703 NA promoter-TSS (NM_012021) promoter-TSS (NM_012021) 340 NM_026306 67674 Mm.318804 NM_026306 ENSMUSG00000038812 Trmt112 0610038D11Rik|Trm112p tRNA methyltransferase 11-2 protein-coding common_peak2_49_585_-0.882129351099508_8.75369217887249_17.7030833602688 chr14 20884669 20886255 + 17.7030833602688 NA Intergenic Intergenic -43971 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak2_79_304_0.89169341755324_8.69851214122687_17.7030459147524 chr13 112463510 112464838 + 17.7030459147524 NA 5' UTR (NM_010560, exon 1 of 17) 5' UTR (NM_010560, exon 1 of 17) 104 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak1_48_126_1.28819155013852_7.63278046184143_17.7028125574937 chr11 94564607 94565409 + 17.7028125574937 NA promoter-TSS (NM_007689) promoter-TSS (NM_007689) -66 NM_007689 12643 Mm.440523 NM_007689 ENSMUSG00000039084 Chad SLRR4A chondroadherin protein-coding common_peak2_220_1446_0.44369196951728_10.7206951912904_17.7005257075672 chr7 133708120 133710055 + 17.7005257075672 NA promoter-TSS (NM_025392) promoter-TSS (NM_025392) 208 NM_009479 22276 Mm.3160 NM_009479 ENSMUSG00000030979 Uros AI415298|UROIIIS|Uros3 uroporphyrinogen III synthase protein-coding common_peak1_76_285_0.916850203994677_8.61829643877573_17.699684271589 chr11 101225652 101226412 + 17.699684271589 NA intron (NM_007970, intron 1 of 20) CpG 431 NM_007970 14055 Mm.5027 NM_007970 ENSMUSG00000006920 Ezh1 ENX-2 enhancer of zeste 1 polycomb repressive complex 2 subunit protein-coding common_peak2_156_1790_-0.469073987580312_10.5720126281958_17.6987004872932 chrX 136989845 136994088 + 17.6987004872932 NA intron (NM_001082412, intron 6 of 6) intron (NM_001082412, intron 6 of 6) 1066 NM_001114179 67062 Mm.276518 NM_001082412 ENSMUSG00000044348 Slc25a53 2310046F18Rik|2810402A17Rik|AI448995|AI841128|Mcart6 solute carrier family 25, member 53 protein-coding common_peak1_37_75_1.57904900113966_7.03745201401342_17.6974562503432 chr12 24830744 24831453 + 17.6974562503432 NA promoter-TSS (NM_026037) promoter-TSS (NM_026037) -501 NM_026037 67216 Mm.167671 NM_026037 ENSMUSG00000020646 Mboat2 2810049G06Rik|AU022889|AW547221|LPCAT4|Moact2|Oact2 membrane bound O-acyltransferase domain containing 2 protein-coding common_peak1_30_387_-1.13323063745282_8.03329752346072_17.6959445119028-2 chr13 30912872 30913544 + 17.6959445119028 NA intron (NM_025588, intron 6 of 27) intron (NM_025588, intron 6 of 27) 34553 NM_153072 210554 Mm.450571 NM_153072 ENSMUSG00000076430 Hus1b - HUS1 checkpoint clamp component B protein-coding common_peak1_30_387_-1.13323063745282_8.03329752346072_17.6959445119028 chr11 115477207 115477778 + 17.6959445119028 NA intron (NM_177778, intron 2 of 2) intron (NM_177778, intron 2 of 2) 1815 NM_177778 276905 Mm.38019 NM_177778 ENSMUSG00000057219 Armc7 A630084C13|BC023126 armadillo repeat containing 7 protein-coding common_peak1_115_1312_-0.556763264007605_10.0802695688891_17.6957654567169 chr6 48676952 48678649 + 17.6957654567169 NA exon (NM_174960, exon 2 of 2) exon (NM_174960, exon 2 of 2) 1665 NM_174960 317758 Mm.116971 NM_174960 ENSMUSG00000051124 Gimap9 A630002K24|BB145400 GTPase, IMAP family member 9 protein-coding common_peak1_411_3442_0.295322040579535_11.8971114858597_17.6954443408668 chr1 136134003 136137920 + 17.6954443408668 NA intron (NM_001039472, intron 1 of 34) intron (NM_001039472, intron 1 of 34) 4560 NM_001039472 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding common_peak1_425_5282_-0.263235321365707_12.2355240338695_17.6896115367334 chr12 110484555 110487432 + 17.6896115367334 NA intron (NM_012023, intron 1 of 13) intron (NM_012023, intron 1 of 13) 254 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak2_208_1335_0.460041324050691_10.6137249544994_17.6891991312323 chr3 59259581 59263137 + 17.6891991312323 NA intron (NM_177855, intron 32 of 43) intron (NM_177855, intron 32 of 43) 1472 NM_027571 70839 Mm.422675 NM_027571 ENSMUSG00000036353 P2ry12 2900079B22Rik|4921504D23Rik|P2Y12 purinergic receptor P2Y, G-protein coupled 12 protein-coding common_peak1_92_390_0.799791923580237_9.01092075909747_17.6880120438118 chr18 80600742 80602498 + 17.6880120438118 NA Intergenic Intergenic -57074 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_239_2809_-0.367861048951516_11.2724238906325_17.6845771484217 chr19 6908779 6911549 + 17.6845771484217 NA promoter-TSS (NM_012021) promoter-TSS (NM_012021) 466 NM_026306 67674 Mm.318804 NM_026306 ENSMUSG00000038812 Trmt112 0610038D11Rik|Trm112p tRNA methyltransferase 11-2 protein-coding common_peak2_412_3454_0.294592519031674_11.9017662547915_17.6831041316251 chr3 146498592 146502339 + 17.6831041316251 NA promoter-TSS (NM_027617) promoter-TSS (NM_027617) 629 NM_010318 14707 Mm.140804 NM_010318 ENSMUSG00000068523 Gng5 G(y)5 guanine nucleotide binding protein (G protein), gamma 5 protein-coding common_peak2_368_2962_0.316869386410712_11.6912776041666_17.681608975267 chrX 13279760 13283126 + 17.681608975267 NA intron (NM_010028, intron 1 of 16) CpG 421 NM_010028 13205 Mm.289662 NM_010028 ENSMUSG00000000787 Ddx3x D1Pas1-rs2|Ddx3|Fin14 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked protein-coding common_peak2_205_1307_0.465013369465014_10.5856535102306_17.6807278914384 chr2 181240779 181242737 + 17.6807278914384 NA intron (NM_183162, intron 1 of 18) intron (NM_183162, intron 1 of 18) 269 NM_183162 229003 Mm.315872 NM_183162 ENSMUSG00000027580 Helz2 PDIP1|Pric285|mKIAA1769|mPDIP1 helicase with zinc finger 2, transcriptional coactivator protein-coding common_peak1_436_5435_-0.259308751656732_12.278675364939_17.6805835201287 chr9 63720214 63723819 + 17.6805835201287 NA intron (NM_016769, intron 1 of 8) (GA)n|Simple_repeat|Simple_repeat 35978 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_25_336_-1.24118353654093_7.7760130129114_17.6767375536267 chr13 101711375 101711887 + 17.6767375536267 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) -19001 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding unique_peak2_36_449_-1.03399754000563_8.29678242121422_17.6716211995712 chrX 107324937 107326898 + 17.6716211995712 NA Intergenic Intergenic 41571 NM_001177782 213439 Mm.383562 NM_001033251 ENSMUSG00000073008 Gpr174 Gm376|Lypsr3 G protein-coupled receptor 174 protein-coding common_peak1_128_1461_-0.523865909545204_10.2517946411798_17.669707398218 chr6 99263577 99265027 + 17.669707398218 NA intron (NM_053202, intron 2 of 18) intron (NM_053202, intron 2 of 18) 2213 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_506_4556_0.258079709459455_12.282908509953_17.6689629465506 chr18 84084897 84090309 + 17.6689629465506 NA promoter-TSS (NM_146090) promoter-TSS (NM_146090) -555 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding common_peak2_712_7169_0.207581586858806_12.9115481970187_17.6653191801453 chr15 79738452 79743133 + 17.6653191801453 NA intron (NM_001205345, intron 1 of 17) intron (NM_001205345, intron 1 of 17) 1744 NM_194342 223697 Mm.202715 NM_194342 ENSMUSG00000042524 Sun2 B230369L08Rik|C030011B15|Unc84b Sad1 and UNC84 domain containing 2 protein-coding common_peak1_39_480_-0.992146544952909_8.41381981129359_17.6599427273252 chr5 135148968 135149610 + 17.6599427273252 NA promoter-TSS (NM_013763) promoter-TSS (NM_013763) -422 NM_013763 27368 Mm.36746 NM_013763 ENSMUSG00000005374 Tbl2 C76179|WS-bTRP transducin (beta)-like 2 protein-coding unique_peak2_31_397_-1.11375904623213_8.07974509742759_17.6594351763665 chrX 23696807 23698522 + 17.6594351763665 NA intron (NM_001305675, intron 2 of 20) intron (NM_001305675, intron 2 of 20) 4613 NM_001305675 72404 Mm.423 NM_175180 ENSMUSG00000036769 Wdr44 2610034K17Rik|RAB11BP|RPH11 WD repeat domain 44 protein-coding common_peak1_28_366_-1.17097293833065_7.93414978367789_17.6585039674962 chr5 124444947 124445463 + 17.6585039674962 NA promoter-TSS (NM_001310723) promoter-TSS (NM_001310723) -294 NM_001310723 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding unique_peak2_21_294_-1.34477340155525_7.53218444347158_17.6531888543014 chr1 40532512 40535030 + 17.6531888543014 NA intron (NM_010553, intron 7 of 12) intron (NM_010553, intron 7 of 12) 18409 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak2_179_1075_0.50794089738072_10.325432811247_17.6470264311672 chr15 28024006 28026647 + 17.6470264311672 NA intron (NM_001081302, intron 1 of 56) CpG 522 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak1_102_460_0.742924943347401_9.22008541210304_17.646751041804 chr18 75278910 75280092 + 17.646751041804 NA intron (NM_027727, intron 16 of 16) intron (NM_027727, intron 16 of 16) 17816 NR_045394 100503117 Mm.250517 NR_045393 ENSMUSG00000102047 2010010A06Rik 5033420E22Rik RIKEN cDNA 2010010A06 gene ncRNA common_peak1_95_1085_-0.617808297339554_9.77590423913458_17.6431654107795 chr5 137501837 137503070 + 17.6431654107795 NA promoter-TSS (NM_028753) promoter-TSS (NM_028753) -24 NM_028753 74097 Mm.290242 NM_028753 ENSMUSG00000029715 Pop7 0610037N12Rik|AI852017|Rpp20 processing of precursor 7, ribonuclease P family, (S. cerevisiae) protein-coding common_peak1_56_658_-0.819635935457878_8.95431668727911_17.6333038805464 chr12 85110854 85111522 + 17.6333038805464 NA intron (NM_030225, intron 1 of 14) CpG 355 NM_030225 78920 Mm.296221 NM_030225 ENSMUSG00000004789 Dlst 1600017E01Rik|4632413C10Rik|4930529O08Rik|DLTS dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) protein-coding common_peak1_140_1600_-0.497491988936954_10.3960115980478_17.6330872842275 chr6 86404023 86405158 + 17.6330872842275 NA intron (NM_001164078, intron 1 of 11) CpG 371 NM_001164078 21841 Mm.333219 NM_011585 ENSMUSG00000071337 Tia1 2310050N03Rik|AI256674|TIA-1|mTIA-1 cytotoxic granule-associated RNA binding protein 1 protein-coding common_peak2_89_370_0.817515572130185_8.94403316268589_17.6310752652722 chr2 23571206 23572382 + 17.6310752652722 NA intron (NM_001165997, intron 1 of 11) CpG 310 NM_029773 76857 Mm.276415 NM_029773 ENSMUSG00000026771 Spopl 4921517N04Rik|AU014935|BB233739|E430033K04Rik speckle-type POZ protein-like protein-coding common_peak1_72_831_-0.718120691755464_9.34137937226336_17.629054974668 chr11 106479657 106480632 + 17.629054974668 NA intron (NM_023913, intron 1 of 21) intron (NM_023913, intron 1 of 21) 7652 NM_023913 78943 Mm.340943 NM_023913 ENSMUSG00000020715 Ern1 9030414B18Rik|AI225830|C85377|Ire1a|Ire1alpha|Ire1p endoplasmic reticulum (ER) to nucleus signalling 1 protein-coding common_peak2_241_1647_0.416678628638586_10.8948398415025_17.6226282341206 chr15 64209315 64213936 + 17.6226282341206 NA intron (NM_001276462, intron 1 of 27) intron (NM_001276462, intron 1 of 27) 101048 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding unique_peak2_46_553_-0.910611078623171_8.6584366267376_17.6192759300829 chr14 105886072 105888077 + 17.6192759300829 NA Intergenic Intergenic 9745 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty homolog 2 (Drosophila) protein-coding common_peak1_109_510_0.71072384863465_9.35254140525495_17.6179912991561 chr7 75795537 75796630 + 17.6179912991561 NA Intergenic Intergenic -52255 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_186_2149_-0.423203270374799_10.8585193092894_17.6159298909627 chr2 168229615 168231052 + 17.6159298909627 NA promoter-TSS (NR_132310) promoter-TSS (NR_132310) 46 NM_010072 13480 Mm.422657 NM_010072 ENSMUSG00000078919 Dpm1 AI118379|AI194292 dolichol-phosphate (beta-D) mannosyltransferase 1 protein-coding common_peak2_44_531_-0.929103797936557_8.59073053653291_17.6112245993764 chr19 8840097 8841703 + 17.6112245993764 NA intron (NM_001290823, intron 1 of 10) intron (NM_001290823, intron 1 of 10) 397 NM_001290823 14705 Mm.345134 NM_008144 ENSMUSG00000071657 Bscl2 2900097C17Rik|AI046355|Gng3lg Berardinelli-Seip congenital lipodystrophy 2 (seipin) protein-coding common_peak2_96_418_0.774531929664057_9.09807239853138_17.6086926344843 chr10 60283550 60285528 + 17.6086926344843 NA promoter-TSS (NM_001146124) promoter-TSS (NM_001146124) 78 NM_001146124 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding unique_peak2_23_314_-1.28543255029518_7.65649174323969_17.6024494815805 chr3 89202701 89203598 + 17.6024494815805 NA intron (NM_001077411, intron 1 of 10) intron (NM_001077411, intron 1 of 10) 224 NR_122037 14466 Mm.5031 NM_008094 ENSMUSG00000028048 Gba GBA1|GC|GCase|GLUC|betaGC glucosidase, beta, acid protein-coding common_peak2_158_1812_-0.464286928147761_10.5920197456703_17.6022209452265 chr6 86403457 86405858 + 17.6022209452265 NA intron (NM_001164078, intron 1 of 11) CpG 438 NM_001164078 21841 Mm.333219 NM_011585 ENSMUSG00000071337 Tia1 2310050N03Rik|AI256674|TIA-1|mTIA-1 cytotoxic granule-associated RNA binding protein 1 protein-coding common_peak1_87_995_-0.646979567001418_9.63651214856737_17.6012333613154 chr9 63737726 63738411 + 17.6012333613154 NA intron (NM_016769, intron 1 of 8) MTEa|LTR|ERVL-MaLR 19926 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_705_7078_0.208549661753887_12.8936046909694_17.5991176114982 chr11 86583641 86589158 + 17.5991176114982 NA intron (NM_029478, intron 11 of 11) intron (NM_029478, intron 11 of 11) -2241 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_346_2724_0.328889481739704_11.5764852554215_17.5986072649956 chr15 100614461 100616641 + 17.5986072649956 NA promoter-TSS (NM_011873) promoter-TSS (NM_011873) -111 NM_011873 23994 Mm.486175 NM_011873 ENSMUSG00000000346 Dazap2 AI314727|Brbp|Gcap28|Prtb|gt6-12|mKIAA0058 DAZ associated protein 2 protein-coding common_peak2_279_2023_0.378289073388293_11.1721381113885_17.5982843380477 chr13 49186778 49190788 + 17.5982843380477 NA intron (NM_013610, intron 1 of 3) intron (NM_013610, intron 1 of 3) 1236 NM_013610 18081 Mm.18503 NM_013610 ENSMUSG00000037966 Ninj1 AU024536 ninjurin 1 protein-coding common_peak2_76_874_-0.696417665946624_9.42493037374638_17.5956013137195 chr5 145203302 145205272 + 17.5956013137195 NA promoter-TSS (NM_001167944) promoter-TSS (NM_001167944) -272 NM_016683 22757 Mm.332842 NM_016683 ENSMUSG00000055991 Zkscan5 AI132486|AI326970|Zfp95|hKraba1 zinc finger with KRAB and SCAN domains 5 protein-coding unique_peak1_32_55_1.76996502560328_6.69233743485924_17.5816936480716 chr10 93390882 93391586 + 17.5816936480716 NA Intergenic Intergenic -41873 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA unique_peak2_20_284_-1.37734346525361_7.4661463764253_17.5769408287599 chr12 4843219 4843999 + 17.5769408287599 NA intron (NM_173416, intron 1 of 1) intron (NM_173416, intron 1 of 1) 306 NM_001170858 238037 Mm.146087 NM_173416 ENSMUSG00000051721 BC068281 A430092C04|Wdcp cDNA sequence BC068281 protein-coding common_peak1_94_1073_-0.620308487710201_9.75862403413031_17.5715223275064 chr17 25016052 25017323 + 17.5715223275064 NA 5' UTR (NM_134126, exon 1 of 30) 5' UTR (NM_134126, exon 1 of 30) 601 NM_134126 106633 Mm.32802 NM_134126 ENSMUSG00000024169 Ift140 AI661311|Tce5|Wdtc2|mKIAA0590 intraflagellar transport 140 protein-coding common_peak1_64_744_-0.764182095016627_9.15900556784121_17.5707504037372 chr6 125191711 125192768 + 17.5707504037372 NA promoter-TSS (NM_025595) promoter-TSS (NM_025595) 39 NM_025595 66493 Mm.138749 NM_025595 ENSMUSG00000030335 Mrpl51 2610511M02Rik|CDA09|HSPC241|Mrp64 mitochondrial ribosomal protein L51 protein-coding common_peak2_227_1514_0.432621263562574_10.7814127101416_17.5688739986336 chr15 60164118 60171181 + 17.5688739986336 NA Intergenic L1VL2|LINE|L1 -151031 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_272_3227_-0.33994530440445_11.4864522110756_17.5684591247263 chr3 138142912 138145075 + 17.5684591247263 NA promoter-TSS (NM_001163457) promoter-TSS (NM_001163457) 455 NM_175389 108943 Mm.471692 NM_175389 ENSMUSG00000004127 Trmt10a 3110023L08Rik|AA794508|Rg9mtd2|Rnmtd2 tRNA methyltransferase 10A protein-coding unique_peak2_38_468_-1.00050066290752_8.37319378106162_17.567004109319 chr6 8530608 8532316 + 17.567004109319 NA intron (NM_001286728, intron 1 of 7) Lx8|LINE|L1 11404 NM_001286729 170772 Mm.210787 NM_133236 ENSMUSG00000029638 Glcci1 2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1 glucocorticoid induced transcript 1 protein-coding common_peak1_38_468_-1.00050066290752_8.37319378106162_17.567004109319 chr13 112001346 112001955 + 17.567004109319 NA Intergenic Intergenic 133714 NR_130345 102636620 Mm.402328 NR_130345 ENSMUSG00000086111 Gm15326 OTTMUSG00000020187 predicted gene 15326 ncRNA common_peak1_218_1429_0.444654110873161_10.7041264871023_17.5662810894459 chr14 34673255 34675140 + 17.5662810894459 NA 5' UTR (NM_001301330, exon 1 of 19) 5' UTR (NM_001301330, exon 1 of 19) 269 NM_001301330 218914 Mm.27957 NM_001004436 ENSMUSG00000041408 Wapl A530089A20Rik|BC037674|DIF-2|FOE|Wapal WAPL cohesin release factor protein-coding common_peak2_120_1367_-0.541285670250449_10.1472096797607_17.5621712302365 chr7 140881084 140883106 + 17.5621712302365 NA promoter-TSS (NM_011875) promoter-TSS (NM_011875) 214 NM_022433 64384 Mm.29760 NM_022433 ENSMUSG00000025486 Sirt3 2310003L23Rik|AI848213|Sir2l3 sirtuin 3 protein-coding common_peak2_74_852_-0.706252223028624_9.38327581980398_17.5619820738145 chr3 95041900 95043697 + 17.5619820738145 NA promoter-TSS (NM_008951) promoter-TSS (NM_008951) -184 NM_008951 19185 Mm.2261 NM_008951 ENSMUSG00000005625 Psmd4 Af1|Mcb1|angiocidin proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 protein-coding common_peak1_100_446_0.752717172422139_9.18048960739439_17.5617583260006 chr9 106684936 106685975 + 17.5617583260006 NA 5' UTR (NM_011573, exon 1 of 6) 5' UTR (NM_011573, exon 1 of 6) 361 NM_011573 21767 Mm.22266 NM_011573 ENSMUSG00000040813 Tex264 TEG-264 testis expressed gene 264 protein-coding common_peak1_174_2003_-0.439115491793354_10.7491090472985_17.5604948233232 chr2 166153869 166155908 + 17.5604948233232 NA intron (NM_028072, intron 1 of 20) CpG 397 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak2_336_2617_0.334933433198389_11.5217160985444_17.5538737821469 chr6 112695061 112697699 + 17.5538737821469 NA intron (NM_021385, intron 1 of 11) CpG 290 NM_021385 58186 Mm.103812 NM_021385 ENSMUSG00000030254 Rad18 2810024C04Rik|Rad18sc RAD18 E3 ubiquitin protein ligase protein-coding common_peak2_45_112_1.34489415286468_7.49262603884753_17.5483357882961 chr5 150262212 150263408 + 17.5483357882961 NA intron (NM_172887, intron 1 of 60) intron (NM_172887, intron 1 of 60) 2880 NM_172887 320365 Mm.216590 NM_172887 ENSMUSG00000056602 Fry 13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143 FRY microtubule binding protein protein-coding unique_peak1_19_13_2.88377930557317_5.24924457484419_17.5468804669849 chr15 83412629 83413102 + 17.5468804669849 NA intron (NM_001159509, intron 1 of 10) intron (NM_001159509, intron 1 of 10) 19985 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_90_1028_-0.634682224173922_9.68968615480701_17.5443034177554 chr5 124327102 124328001 + 17.5443034177554 NA promoter-TSS (NM_001134717) promoter-TSS (NM_001134717) 421 NR_102690 269702 Mm.60224 NM_001081323 ENSMUSG00000038126 Mphosph9 4930548D04Rik|9630025B04Rik|AW413446|AW547060|B930097C17Rik|C87456|MPP-9|MPP9 M-phase phosphoprotein 9 protein-coding common_peak1_41_500_-0.964579838210353_8.48637687409003_17.5429707958948 chr12 108760574 108761510 + 17.5429707958948 NA Intergenic MMAR1|DNA|TcMar-Mariner -32269 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak1_41_500_-0.964579838210353_8.48637687409003_17.5429707958948-2 chr6 117874341 117875024 + 17.5429707958948 NA Intergenic Intergenic 11605 NM_001001792 22685 Mm.249661 NM_008616 ENSMUSG00000042097 Zfp239 Mok-2|Mok2|Znf239 zinc finger protein 239 protein-coding unique_peak2_17_253_-1.4839993248995_7.24668502432242_17.5415028181685 chr16 10995799 10997418 + 17.5415028181685 NA Intergenic ORR1C1|LTR|ERVL-MaLR -3487 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak1_158_1811_-0.463490958449837_10.5916217608213_17.5380721180933 chr17 50469738 50471844 + 17.5380721180933 NA Intergenic Intergenic -38756 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak2_124_623_0.648718560152455_9.60976149893848_17.5369837018362 chr16 5253968 5256064 + 17.5369837018362 NA intron (NM_027446, intron 1 of 7) intron (NM_027446, intron 1 of 7) 940 NM_027446 70511 Mm.45780 NM_027446 ENSMUSG00000022544 Eef2kmt 5730409G15Rik|Fam86|Fam86a|eEF2-KMT eukaryotic elongation factor 2 lysine methyltransferase protein-coding common_peak1_98_1117_-0.605250009029026_9.82407946832868_17.5340712577396 chr9 41152505 41153764 + 17.5340712577396 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) 4360 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding unique_peak2_6_140_-2.30621122475358_5.986445740022_17.529713117189 chr6 113041291 113042316 + 17.529713117189 NA Intergenic L2a|LINE|L2 -4524 NM_008188 14911 Mm.781 NM_008188 ENSMUSG00000030264 Thumpd3 AW556087|Gt(ROSA)26asSor|Gtrosa26as THUMP domain containing 3 protein-coding common_peak2_99_1128_-0.601589956263906_9.84003479264105_17.527569606246 chr15 98992412 98994268 + 17.527569606246 NA Intergenic CpG 7375 NR_045991 75951 Mm.441657 NR_045991 ENSMUSG00000097587 4930578M01Rik 3010001K12Rik RIKEN cDNA 4930578M01 gene ncRNA common_peak1_56_657_-0.817445054185068_8.95322124664271_17.5274261486532 chr1 80380757 80381471 + 17.5274261486532 NA Intergenic Intergenic -40424 NM_016716 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding common_peak1_153_1752_-0.472276428800116_10.5394720663595_17.522631807838 chr7 45123475 45125134 + 17.522631807838 NA promoter-TSS (NM_013725) promoter-TSS (NM_013725) 85 NM_013725 27207 Mm.196538 NM_013725 ENSMUSG00000003429 Rps11 - ribosomal protein S11 protein-coding common_peak2_424_3594_0.287971379404151_11.9557617450287_17.5214032850094 chr11 62455975 62459408 + 17.5214032850094 NA promoter-TSS (NM_177229) promoter-TSS (NM_177229) -359 NM_177229 20185 Mm.271814 NM_011308 ENSMUSG00000018501 Ncor1 5730405M06Rik|A230020K14Rik|N-CoR|RIP13|Rxrip13|mKIAA1047 nuclear receptor co-repressor 1 protein-coding common_peak1_88_364_0.821265714996809_8.92238551126578_17.5210284755828 chr12 3833751 3835206 + 17.5210284755828 NA intron (NM_001271753, intron 1 of 22) intron (NM_001271753, intron 1 of 22) 27318 NM_001271753 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding common_peak2_102_461_0.739798842360681_9.2216484625964_17.5202236706315 chr15 76670691 76672674 + 17.5202236706315 NA promoter-TSS (NM_033371) promoter-TSS (NM_033371) 2 NM_033371 73062 Mm.322901 NM_033371 ENSMUSG00000033819 Ppp1r16a 2900084E10Rik|Mypt3|R75527 protein phosphatase 1, regulatory (inhibitor) subunit 16A protein-coding common_peak1_71_255_0.957909984245379_8.47895499212269_17.5166418211874 chr18 60623804 60624582 + 17.5166418211874 NA 5' UTR (NM_177340, exon 1 of 3) 5' UTR (NM_177340, exon 1 of 3) 112 NM_177340 104027 Mm.252321 NM_177340 ENSMUSG00000043079 Synpo 9030217H17Rik|9130229N11|9330140I15Rik|AW046661 synaptopodin protein-coding common_peak1_103_468_0.735201754498268_9.24104498976451_17.516525747543 chr14 66195682 66197226 + 17.516525747543 NA intron (NM_172498, intron 2 of 29) intron (NM_172498, intron 2 of 29) 17098 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_70_808_-0.72683634658296_9.2965777191385_17.5141970081117 chr17 86122183 86123354 + 17.5141970081117 NA intron (NM_030133, intron 7 of 20) intron (NM_030133, intron 7 of 20) 22407 NM_030133 78586 Mm.146236 NM_030133 ENSMUSG00000024135 Srbd1 AI461933|C85414|D530025C17Rik S1 RNA binding domain 1 protein-coding unique_peak1_34_63_1.68144571452353_6.84072285726177_17.5049401659009 chr9 110281188 110281505 + 17.5049401659009 NA promoter-TSS (NR_105744) promoter-TSS (NR_105744) 59 NR_105744 102465959 NR_105744 ENSMUSG00000098973 Mir6236 Gm27547|mmu-mir-6236 microRNA 6236 ncRNA common_peak1_60_191_1.07955695032582_8.12474097588406_17.4982044994842 chr15 78459676 78460627 + 17.4982044994842 NA intron (NM_027902, intron 4 of 17) intron (NM_027902, intron 4 of 17) 8483 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding unique_peak2_5_129_-2.46181696730907_5.79145932937392_17.4919728468422 chr10 78264565 78265656 + 17.4919728468422 NA Intergenic Intergenic -20468 NM_001081055 216131 Mm.27539 NM_001081055 ENSMUSG00000000374 Trappc10 B230307C21Rik|Gm870|Tmem1 trafficking protein particle complex 10 protein-coding unique_peak1_23_24_2.36991927831737_5.82881582893341_17.4919728468422 chr11 67536272 67536805 + 17.4919728468422 NA intron (NM_008088, intron 1 of 13) intron (NM_008088, intron 1 of 13) 3540 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding unique_peak1_23_24_2.36991927831737_5.82881582893341_17.4919728468422-2 chr19 53211965 53212565 + 17.4919728468422 NA intron (NM_013758, intron 2 of 15) intron (NM_013758, intron 2 of 15) 42940 NR_036590 69319 Mm.57452 NR_036590 1700001K23Rik - RIKEN cDNA 1700001K23 gene ncRNA common_peak2_155_1775_-0.468247794369532_10.5602919691653_17.4887414778355 chr11 48799179 48801880 + 17.4887414778355 NA exon (NM_008143, exon 1 of 8) exon (NM_008143, exon 1 of 8) 169 NM_008143 14694 Mm.5305 NM_008143 ENSMUSG00000020372 Rack1 AL033335|GB-like|Gnb2-rs1|Gnb2l1|p205 receptor for activated C kinase 1 protein-coding common_peak2_247_2906_-0.358796217842862_11.3259172472148_17.4849954316465 chr15 38517402 38520334 + 17.4849954316465 NA intron (NM_018745, intron 1 of 11) CpG 398 NM_001301688 54375 Mm.250214 NM_018745 ENSMUSG00000037458 Azin1 1700085L02Rik|AZI|Oazi|Oazin antizyme inhibitor 1 protein-coding common_peak1_48_572_-0.885515091846221_8.7196337828338_17.4588476432649 chr6 121237349 121238231 + 17.4588476432649 NA Intergenic Intergenic -8116 NM_011909 24110 Mm.326911 NM_011909 ENSMUSG00000030107 Usp18 1110058H21Rik|AW047653|UBP43|Ubp15 ubiquitin specific peptidase 18 protein-coding common_peak1_500_4489_0.258381392212732_12.2616904257349_17.4562079790103 chr10 41474862 41478344 + 17.4562079790103 NA intron (NM_001164433, intron 1 of 22) intron (NM_001164433, intron 1 of 22) 289 NM_138315 171580 Mm.290431 NM_138315 ENSMUSG00000019823 Mical1 MICAL|MICAL-1|Nical microtubule associated monooxygenase, calponin and LIM domain containing 1 protein-coding unique_peak1_27_37_2.03863723657434_6.26724613173076_17.4381596540868 chr4 120854608 120855255 + 17.4381596540868 NA Intergenic CpG -22938 NM_182929 242662 Mm.192502 NM_182929 ENSMUSG00000032890 Rims3 A730060M23Rik|Nim3|Rim3|mKIAA0237 regulating synaptic membrane exocytosis 3 protein-coding common_peak1_38_80_1.53309344672324_7.10639672624624_17.4322487324936 chr11 5295865 5296534 + 17.4322487324936 NA intron (NM_001080924, intron 2 of 8) intron (NM_001080924, intron 2 of 8) -34589 NM_032396 84035 Mm.209989 NM_032396 ENSMUSG00000020393 Kremen1 AV002070|Kremen|Krm1 kringle containing transmembrane protein 1 protein-coding common_peak2_38_80_1.53309344672324_7.10639672624624_17.4322487324936 chr15 82851268 82851946 + 17.4322487324936 NA exon (NM_001114140, exon 2 of 6) exon (NM_001114140, exon 2 of 6) 46854 NR_027799 21378 Mm.417272 NR_027799 Tbrg3 TB-11 transforming growth factor beta regulated gene 3 ncRNA common_peak1_72_262_0.943400037093326_8.51061900783897_17.4297495281117 chrX 142965865 142966993 + 17.4297495281117 NA exon (NM_019496, exon 1 of 6) exon (NM_019496, exon 1 of 6) 299 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding common_peak2_72_262_0.943400037093326_8.51061900783897_17.4297495281117 chrX 142965854 142966977 + 17.4297495281117 NA exon (NM_019496, exon 1 of 6) exon (NM_019496, exon 1 of 6) 313 NM_019496 56068 Mm.143724 NM_019496 ENSMUSG00000042225 Ammecr1 6230420G18Rik Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding unique_peak2_12_201_-1.72940254929722_6.79351020810319_17.4234780110288 chr1 120843737 120844837 + 17.4234780110288 NA Intergenic Intergenic 241800 NM_010133 13798 Mm.2657 NM_010133 ENSMUSG00000058665 En1 En-1|Mo-en.1|engrailed-1 engrailed 1 protein-coding common_peak1_67_232_0.992574738692603_8.36047351400058_17.419431680997 chr10 121350829 121351926 + 17.419431680997 NA Intergenic CpG -13713 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding common_peak2_67_232_0.992574738692603_8.36047351400058_17.419431680997 chr1 9797617 9798757 + 17.419431680997 NA promoter-TSS (NM_177547) promoter-TSS (NM_177547) 57 NM_177547 170755 Mm.336410 NM_133220 ENSMUSG00000025915 Sgk3 2510015P22Rik|A330005P07Rik|Cisk|fy|fz serum/glucocorticoid regulated kinase 3 protein-coding common_peak1_67_232_0.992574738692603_8.36047351400058_17.419431680997-2 chr11 115174549 115175498 + 17.419431680997 NA intron (NM_012030, intron 1 of 5) MIRc|SINE|MIR 11682 NM_012030 26941 Mm.27842 NM_012030 ENSMUSG00000020733 Slc9a3r1 EBP-50|NHE-RF|NHERF-1|NHERF1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 protein-coding common_peak1_51_604_-0.858757776334668_8.81141244399462_17.4185343711422 chr17 15564425 15565093 + 17.4185343711422 NA Intergenic Intergenic -1436 NM_144809 213389 Mm.215162 NM_144809 ENSMUSG00000051977 Prdm9 BC012016|Dsbc1|G1-419-29|Meisetz|PRDM9-B|Rcr1|repro7 PR domain containing 9 protein-coding common_peak1_93_1060_-0.62146554230239_9.74047616976357_17.4170269959782 chr5 96208747 96210110 + 17.4170269959782 NA promoter-TSS (NM_001039084) promoter-TSS (NM_001039084) -687 NM_001039084 94061 Mm.295499 NM_053158 ENSMUSG00000029486 Mrpl1 2410002L03Rik|5830418D04Rik|AI462572|L1mt mitochondrial ribosomal protein L1 protein-coding common_peak1_204_1302_0.461927483375613_10.5785851102559_17.4152080285706 chr2 181240835 181242673 + 17.4152080285706 NA intron (NM_183162, intron 1 of 18) intron (NM_183162, intron 1 of 18) 273 NM_183162 229003 Mm.315872 NM_183162 ENSMUSG00000027580 Helz2 PDIP1|Pric285|mKIAA1769|mPDIP1 helicase with zinc finger 2, transcriptional coactivator protein-coding common_peak1_87_358_0.825182331243612_8.90043119944486_17.4116286856302 chr9 57157311 57158552 + 17.4116286856302 NA intron (NM_025417, intron 1 of 7) intron (NM_025417, intron 1 of 7) 368 NM_025417 66199 Mm.41687 NM_025417 ENSMUSG00000032299 Commd4 1110039H05Rik COMM domain containing 4 protein-coding common_peak1_53_624_-0.838892501523498_8.8682661287877_17.4106801661977 chr15 66799985 66800932 + 17.4106801661977 NA intron (NM_001029841, intron 2 of 7) intron (NM_001029841, intron 2 of 7) 31371 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_88_1004_-0.639961417302104_9.65299907741524_17.4092952877418 chr11 96454277 96456755 + 17.4092952877418 NA intron (NR_033524, intron 2 of 2) intron (NR_033524, intron 2 of 2) 9031 NR_033524 100038600 Mm.483549 NR_033524 Gm11529 OTTMUSG00000001775 predicted gene 11529 ncRNA common_peak2_203_2354_-0.400615944999977_11.0012033720002_17.4049354188579 chr7 141264377 141268033 + 17.4049354188579 NA intron (NM_001252600, intron 1 of 8) intron (NM_001252600, intron 1 of 8) 219 NM_001252601 54123 Mm.3233 NM_016850 ENSMUSG00000025498 Irf7 - interferon regulatory factor 7 protein-coding common_peak1_18_262_-1.43855478589541_7.3196415963446_17.4036879490158 chr14 55603489 55603972 + 17.4036879490158 NA promoter-TSS (NM_001159418) promoter-TSS (NM_001159418) -255 NM_008394 16391 Mm.2032 NM_008394 ENSMUSG00000002325 Irf9 Irf-9|Isgf3g|p48 interferon regulatory factor 9 protein-coding common_peak1_66_763_-0.746885127886024_9.20398626409274_17.3985755073814 chr2 120027574 120028339 + 17.3985755073814 NA TTS (NM_011941) TTS (NM_011941) 473 NM_001114637 433466 Mm.482417 NM_001114637 ENSMUSG00000098789 Jmjd7 - jumonji domain containing 7 protein-coding common_peak2_399_3313_0.298106549660357_11.8434111620516_17.3976388792822 chr10 43995269 43999432 + 17.3976388792822 NA exon (NM_172393, exon 2 of 20) exon (NM_172393, exon 2 of 20) 7496 NM_172393 11630 Mm.292082 NM_172393 ENSMUSG00000019866 Aim1 AI462491|AI463325 absent in melanoma 1 protein-coding common_peak1_37_76_1.56018997388835_7.04688152763907_17.3957048418309 chr6 54923509 54924507 + 17.3957048418309 NA TTS (NM_001171007) TTS (NM_001171007) 47653 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_71_817_-0.71804704869637_9.31693350859356_17.3946797815626 chr10 79896347 79898746 + 17.3946797815626 NA intron (NM_198107, intron 11 of 14) (CTGGGG)n|Simple_repeat|Simple_repeat 6693 NM_001291915 11537 Mm.4407 NM_013459 ENSMUSG00000061780 Cfd Adn|DF complement factor D (adipsin) protein-coding common_peak2_110_1251_-0.566100679567922_10.0069685071487_17.3932437746885 chr5 148488762 148490656 + 17.3932437746885 NA Intergenic ORR1E|LTR|ERVL-MaLR 63079 NM_011908 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG ubiquitin-like 3 protein-coding common_peak1_149_823_0.570261492292806_9.97163127332962_17.3921047556592 chr10 66863658 66865667 + 17.3921047556592 NA Intergenic Intergenic -140413 NR_110511 102634101 Mm.445258 NR_110511 Gm31763 - predicted gene, 31763 ncRNA common_peak2_361_4398_-0.287140259247407_11.9593897562864_17.3917662959922 chr18 70527803 70535106 + 17.3917662959922 NA Intergenic MTD|LTR|ERVL-MaLR -1133 NM_001289515 26447 Mm.244352 NM_011972 ENSMUSG00000038425 Poli Rad30b polymerase (DNA directed), iota protein-coding common_peak2_104_476_0.727734774671308_9.26171284334117_17.3902447280963 chr3 90293085 90294378 + 17.3902447280963 NA Intergenic CpG 23582 NR_105979 102465612 NR_105979 ENSMUSG00000099199 Mir7012 Gm27370|mmu-mir-7012 microRNA 7012 ncRNA common_peak1_230_1545_0.426531453001502_10.8075903304256_17.3900763032281 chr12 25226478 25228800 + 17.3900763032281 NA Intergenic MIRc|SINE|MIR 98465 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_31_395_-1.10649104576809_8.07611109719557_17.38884129313 chr9 57074724 57075309 + 17.38884129313 NA intron (NM_001110351, intron 1 of 21) intron (NM_001110351, intron 1 of 21) -1360 NM_001110350 20466 Mm.15755 NM_011378 ENSMUSG00000042557 Sin3a AW553200|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) protein-coding unique_peak2_31_395_-1.10649104576809_8.07611109719557_17.38884129313 chr12 108041136 108042949 + 17.38884129313 NA Intergenic Intergenic -38628 NM_021399 58208 Mm.392694 NM_021399 ENSMUSG00000048251 Bcl11b 9130430L19Rik|AI604821|B630002E05Rik|BCL-11B|Ctip2|Rit1 B cell leukemia/lymphoma 11B protein-coding common_peak2_84_960_-0.656750772921258_9.58001723431312_17.3872519801712 chr5 124954068 124956060 + 17.3872519801712 NA Intergenic Intergenic -48411 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_45_540_-0.914411668546951_8.62227894955334_17.3805146768795 chr3 90292277 90292858 + 17.3805146768795 NA Intergenic Intergenic 22418 NR_105979 102465612 NR_105979 ENSMUSG00000099199 Mir7012 Gm27370|mmu-mir-7012 microRNA 7012 ncRNA common_peak1_45_540_-0.914411668546951_8.62227894955334_17.3805146768795-2 chr8 79638613 79639217 + 17.3805146768795 NA promoter-TSS (NM_001081164) promoter-TSS (NM_001081164) -761 NM_001256033 73945 Mm.34348 NM_001081164 ENSMUSG00000036990 Otud4 4930431L18Rik|AI449692|D8Ertd69e|mKIAA1046 OTU domain containing 4 protein-coding common_peak1_112_534_0.692124416883891_9.40945728973045_17.3768430582141 chr3 109340207 109342190 + 17.3768430582141 NA exon (NM_020505, exon 1 of 27) exon (NM_020505, exon 1 of 27) 515 NM_020505 57257 Mm.282257 NM_020505 ENSMUSG00000033721 Vav3 A530094I06Rik|AA986410|Idd18.1 vav 3 oncogene protein-coding common_peak2_74_850_-0.702865613396296_9.38158251498782_17.376036550979 chr17 46750869 46752846 + 17.376036550979 NA intron (NM_028065, intron 1 of 5) intron (NM_028065, intron 1 of 5) 357 NM_001305989 72029 Mm.240325 NM_028065 ENSMUSG00000023973 Cnpy3 1600025D17Rik|2410050O22Rik|AI413153|CAG4A|ERDA5|PRAT4A|Tnrc5 canopy FGF signaling regulator 3 protein-coding unique_peak1_18_11_3.01540170267573_5.09266335205902_17.3746816953496 chr17 47774629 47775085 + 17.3746816953496 NA intron (NM_001161723, intron 1 of 8) intron (NM_001161723, intron 1 of 8) -10887 NM_011549 21425 Mm.2305 NM_011549 ENSMUSG00000023990 Tfeb Tcfeb|bHLHe35 transcription factor EB protein-coding unique_peak2_17_252_-1.47830821282164_7.24383946828349_17.374138311908 chrX 7879227 7880644 + 17.374138311908 NA intron (NM_138606, intron 3 of 5) intron (NM_138606, intron 3 of 5) 1629 NM_138606 18715 Mm.347478 NM_138606 ENSMUSG00000031155 Pim2 DXCch3|Pim-2 proviral integration site 2 protein-coding common_peak1_26_343_-1.2040571878625_7.82423616077085_17.3715944689007 chr11 115536401 115536887 + 17.3715944689007 NA promoter-TSS (NM_133354) promoter-TSS (NM_133354) -414 NM_133354 170930 Mm.29923 NM_133354 ENSMUSG00000020738 Sumo2 SUMO-2|Smt3A|Smt3b|Smt3h2 small ubiquitin-like modifier 2 protein-coding common_peak1_49_582_-0.874724569877756_8.74998978826162_17.3667688191396-2 chr7 123217334 123218166 + 17.3667688191396 NA intron (NM_146198, intron 1 of 16) intron (NM_146198, intron 1 of 16) 2884 NM_146198 233836 Mm.211838 NM_146198 ENSMUSG00000030769 Slc5a11 2010013B02Rik|Kst1|RKST2|SMIT2|Slc5a10 solute carrier family 5 (sodium/glucose cotransporter), member 11 protein-coding common_peak1_49_582_-0.874724569877756_8.74998978826162_17.3667688191396 chr7 58398589 58399264 + 17.3667688191396 NA Intergenic Intergenic -259276 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_247_1709_0.406738528520114_10.9431498740333_17.3622841885128 chr7 66252207 66254745 + 17.3622841885128 NA Intergenic Intergenic 128248 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak1_15_5_3.71129076240401_4.44060788192316_17.3554798358653 chr9 99110340 99110726 + 17.3554798358653 NA intron (NM_029094, intron 2 of 23) PB1D7|SINE|Alu 29678 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak1_189_1167_0.48525754258155_10.4324533301708_17.3545966188291 chr17 28484813 28486119 + 17.3545966188291 NA intron (NM_010220, intron 1 of 10) intron (NM_010220, intron 1 of 10) 683 NM_010220 14229 Mm.276405 NM_010220 ENSMUSG00000024222 Fkbp5 D17Ertd592e|Dit1|FKBP-5|FKBP51 FK506 binding protein 5 protein-coding common_peak2_66_226_1.00399521285881_8.32854609372032_17.3529665565274 chr12 85697787 85698808 + 17.3529665565274 NA intron (NM_016767, intron 2 of 2) CpG 11577 NM_016767 53314 Mm.6672 NM_016767 ENSMUSG00000034266 Batf B-ATF|SFA-2 basic leucine zipper transcription factor, ATF-like protein-coding common_peak1_186_1140_0.490834597813343_10.4015003751954_17.3528847000136 chr19 30029901 30031702 + 17.3528847000136 NA exon (NM_144873, exon 1 of 16) exon (NM_144873, exon 1 of 16) 288 NM_144873 109113 Mm.313364 NM_144873 ENSMUSG00000024817 Uhrf2 2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf ubiquitin-like, containing PHD and RING finger domains 2 protein-coding common_peak1_122_1387_-0.53321407135955_10.1721848168985_17.3519893579453 chr17 21478021 21479763 + 17.3519893579453 NA Intergenic B1_Mur4|SINE|Alu -10096 NM_013843 24132 Mm.42140 NM_013843 ENSMUSG00000057409 Zfp53 D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8 zinc finger protein 53 protein-coding common_peak1_71_256_0.9522854350515_8.48176726671963_17.3485559718138 chr5 115066749 115068028 + 17.3485559718138 NA intron (NM_029012, intron 2 of 10) intron (NM_029012, intron 2 of 10) 40574 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt Gm13826|OTTMUSG00000014624 ribosomal protein L37, retrotransposed protein-coding common_peak2_640_6237_0.220090831212467_12.7169132529804_17.3452022704009 chr4 59273067 59285040 + 17.3452022704009 NA Intergenic B2_Mm1t|SINE|B2 19002 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_96_420_0.767661940297014_9.1015073932149_17.344423296587 chr13 95764626 95765965 + 17.344423296587 NA intron (NM_027711, intron 2 of 35) intron (NM_027711, intron 2 of 35) 68375 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak2_220_1451_0.438715438053254_10.7231834570224_17.3423601740076 chr16 90282694 90285175 + 17.3423601740076 NA intron (NM_178923, intron 1 of 19) CpG 491 NM_178923 224432 Mm.439811 NM_178923 ENSMUSG00000022983 Scaf4 AA517739|Sfrs15|Sra4|Srsf15 SR-related CTD-associated factor 4 protein-coding common_peak2_144_1643_-0.486225682290794_10.4398817425363_17.3358423201951 chr11 97997643 98002461 + 17.3358423201951 NA Intergenic L2b|LINE|L2 -3879 NM_207231 217151 Mm.277896 NM_207231 ENSMUSG00000038352 Arl5c Arl12|BC065791 ADP-ribosylation factor-like 5C protein-coding common_peak2_227_2651_-0.375141718189701_11.1852942010177_17.3297992233568 chr19 8918486 8922326 + 17.3297992233568 NA promoter-TSS (NM_024256) promoter-TSS (NM_024256) 13 NM_024256 72727 Mm.259 NM_024256 ENSMUSG00000071649 B3gat3 2810405M13Rik beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) protein-coding common_peak1_90_379_0.8024894343891_8.9711003255255_17.3238522278233 chr5 122707061 122708517 + 17.3238522278233 NA intron (NM_001310720, intron 1 of 10) CpG 245 NM_011026 18438 Mm.290884 NM_011026 ENSMUSG00000029470 P2rx4 AI504491|AW555605|D5Ertd444e|P2X4 purinergic receptor P2X, ligand-gated ion channel 4 protein-coding common_peak1_228_1527_0.428039066722425_10.791448361397_17.3229152102657 chr19 40678143 40680627 + 17.3229152102657 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 19615 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak1_125_633_0.639882440998731_9.62828025063877_17.320795591097 chr1 58585459 58587184 + 17.320795591097 NA promoter-TSS (NM_172513) promoter-TSS (NM_172513) 12 NM_001310598 213056 Mm.26272 NM_172513 ENSMUSG00000038174 Fam126b C130065N10Rik|D1Ertd53e|D630010C10 family with sequence similarity 126, member B protein-coding common_peak2_99_441_0.751337255117663_9.16357118695026_17.3130116987769 chr12 25231308 25233746 + 17.3130116987769 NA Intergenic Intergenic 103353 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak2_2_94_-3.23591707379792_4.95189707143199_17.3107004960166 chr12 8636874 8637617 + 17.3107004960166 NA Intergenic Intergenic -36889 NM_001160221 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding common_peak1_51_603_-0.856371183497791_8.81021914757618_17.3087984065399 chr6 12125129 12126006 + 17.3087984065399 NA Intergenic Intergenic -15987 NR_003631 625347 Mm.389084 NM_001039041 ENSMUSG00000057223 Gm6578 EG625347 mitochondrial ribosomal protein L32 pseudogene pseudo common_peak2_51_603_-0.856371183497791_8.81021914757618_17.3087984065399 chr1 34800918 34803158 + 17.3087984065399 NA intron (NM_183019, intron 1 of 9) CpG 316 NM_183019 226970 Mm.41604 NM_183019 ENSMUSG00000037509 Arhgef4 9330140K16Rik|Asef|ENSMUSG00000070955 Rho guanine nucleotide exchange factor (GEF) 4 protein-coding common_peak1_416_5147_-0.263677041274816_12.1979578175833_17.3069565265327 chr8 72133737 72136873 + 17.3069565265327 NA promoter-TSS (NM_001001491) promoter-TSS (NM_001001491) 13 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak1_404_3371_0.295058848929118_11.8669182454066_17.3008184023573 chr2 18056052 18058442 + 17.3008184023573 NA promoter-TSS (NR_106115) promoter-TSS (NR_106115) -599 NR_106115 102466840 NR_106115 ENSMUSG00000099050 Mir7655 Gm27794|mmu-mir-7655 microRNA 7655 ncRNA common_peak1_101_455_0.741393074149071_9.20358655123928_17.3007746525022 chr5 34369782 34370940 + 17.3007746525022 NA exon (NM_001243123, exon 1 of 21) exon (NM_001243123, exon 1 of 21) 428 NM_001243123 231128 Mm.286885 NM_001030306 ENSMUSG00000037210 Fam193a - family with sequence similarity 193, member A protein-coding unique_peak2_9_169_-1.94486901969328_6.43695642629106_17.300334384744 chr11 87108209 87108988 + 17.300334384744 NA promoter-TSS (NM_025377) promoter-TSS (NM_025377) 116 NM_175563 270906 Mm.132381 NM_175563 ENSMUSG00000020493 Prr11 B930067F20Rik proline rich 11 protein-coding common_peak2_122_610_0.65054921139998_9.58030317551872_17.2999383377811 chr6 54680708 54682508 + 17.2999383377811 NA promoter-TSS (NM_001289741) promoter-TSS (NM_001289741) -16 NM_001289741 68235 Mm.233860 NM_026629 ENSMUSG00000038065 Mturn 2410066E13Rik|AI448550|B230212L03Rik maturin, neural progenitor differentiation regulator homolog (Xenopus) protein-coding common_peak1_91_386_0.795495670321813_8.99393759130532_17.2997800779054 chr8 84126045 84127433 + 17.2997800779054 NA intron (NM_001013384, intron 2 of 9) B1_Mur4|SINE|Alu 750 NM_001013384 244550 Mm.334654 NM_001013384 ENSMUSG00000012889 Podnl1 5832418A03Rik|Gm506 podocan-like 1 protein-coding common_peak1_31_52_1.79494511974833_6.62539301443736_17.2955295741826 chr8 126857628 126858168 + 17.2955295741826 NA Intergenic MTEa|LTR|ERVL-MaLR 88023 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak1_36_446_-1.02434736997191_8.29195733619736_17.2895072469558 chr11 86483941 86484607 + 17.2895072469558 NA promoter-TSS (NM_029788) promoter-TSS (NM_029788) -383 NM_029788 76892 Mm.262707 NM_029788 ENSMUSG00000020521 Rnft1 0610013E23Rik|AV007605 ring finger protein, transmembrane 1 protein-coding common_peak1_336_2622_0.332180722878645_11.5230924537043_17.2879568411688 chr12 104998902 105004105 + 17.2879568411688 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) -2826 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_229_1537_0.426338914196357_10.80000924506_17.2872784698449 chr10 12867375 12869858 + 17.2872784698449 NA Intergenic Intergenic -6881 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_50_592_-0.864217517418547_8.77977953583673_17.2803726745744 chr17 21476799 21477523 + 17.2803726745744 NA Intergenic MMVL30-int|LTR|ERV1 -11827 NM_013843 24132 Mm.42140 NM_013843 ENSMUSG00000057409 Zfp53 D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8 zinc finger protein 53 protein-coding common_peak1_171_1010_0.517384510723648_10.2402595372648_17.2688119202234 chr5 129500613 129501955 + 17.2688119202234 NA promoter-TSS (NM_172276) promoter-TSS (NM_172276) 53 NM_172276 231769 Mm.288714 NM_172276 ENSMUSG00000029439 Sfswap 1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8 splicing factor, suppressor of white-apricot homolog (Drosophila) protein-coding common_peak1_105_484_0.720513139554978_9.28209750685198_17.2677460112937 chr11 57801608 57802620 + 17.2677460112937 NA promoter-TSS (NR_131042) promoter-TSS (NR_131042) 477 NM_001081168 50724 Mm.340083 NM_001081168 ENSMUSG00000020519 Sap30l 2310079P12Rik|AF006998|L55 SAP30-like protein-coding common_peak2_164_950_0.532124003678637_10.1593635326999_17.2660293670763 chr11 51649794 51651418 + 17.2660293670763 NA promoter-TSS (NR_027958) promoter-TSS (NR_027958) -348 NR_027958 97775 Mm.220299 NM_175289 ENSMUSG00000052563 D930048N14Rik AI315703|R75254 RIKEN cDNA D930048N14 gene ncRNA unique_peak1_17_9_3.18275726698531_4.91330672838001_17.2649788482355-2 chr7 16020576 16020945 + 17.2649788482355 NA Intergenic Intergenic -21265 NM_001081418 243842 Mm.440249 NM_001081418 ENSMUSG00000070808 Gltscr1 - glioma tumor suppressor candidate region gene 1 protein-coding unique_peak1_17_9_3.18275726698531_4.91330672838001_17.2649788482355 chr13 52826847 52827198 + 17.2649788482355 NA Intergenic L1M4|LINE|L1 -69817 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak1_296_2202_0.360335200266565_11.2854213798342_17.2624278751664 chr11 120352262 120355099 + 17.2624278751664 NA Intergenic Intergenic 5002 NR_038126 66838 Mm.375010 NR_038126 ENSMUSG00000043644 0610009L18Rik - RIKEN cDNA 0610009L18 gene ncRNA common_peak2_112_535_0.689430307714629_9.41080434431509_17.2601582386274 chr15 85041570 85043563 + 17.2601582386274 NA intron (NM_133750, intron 1 of 8) intron (NM_133750, intron 1 of 8) 5504 NM_133750 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding common_peak1_44_528_-0.920945274549394_8.58665127483933_17.2595777869725 chr8 116552512 116553525 + 17.2595777869725 NA Intergenic Intergenic 48003 NM_029297 75465 Mm.23114 NM_029297 ENSMUSG00000034467 Dynlrb2 1700009A04Rik|DNLC2B|Dncl2b dynein light chain roadblock-type 2 protein-coding unique_peak1_28_41_1.95634589173381_6.37049036864566_17.2573125995871 chr10 80097558 80098174 + 17.2573125995871 NA intron (NM_183426, intron 1 of 31) intron (NM_183426, intron 1 of 31) 4836 NM_183426 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch homolog 2 (Drosophila) protein-coding unique_peak1_28_41_1.95634589173381_6.37049036864566_17.2573125995871-2 chr18 23810689 23811198 + 17.2573125995871 NA intron (NM_153058, intron 1 of 6) intron (NM_153058, intron 1 of 6) 6973 NM_153058 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak2_119_1352_-0.54006506900612_10.1319135894735_17.2561542087501 chr7 28740791 28742955 + 17.2561542087501 NA promoter-TSS (NM_023637) promoter-TSS (NM_023637) -92 NM_011885 24030 Mm.358650 NM_011885 ENSMUSG00000045948 Mrps12 AI327385|Rpms12|rps12 mitochondrial ribosomal protein S12 protein-coding common_peak1_49_581_-0.872247839585542_8.74875142311551_17.2551903032424 chr7 126861981 126862811 + 17.2551903032424 NA promoter-TSS (NM_153580) promoter-TSS (NM_153580) 424 NM_172746 233876 Mm.363427 NM_172746 ENSMUSG00000042606 Hirip3 B130036O03|C86302 HIRA interacting protein 3 protein-coding common_peak1_147_1676_-0.478658699980222_10.4723376235742_17.2524319752765 chr17 47507252 47509564 + 17.2524319752765 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 3357 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_196_1231_0.472320075930398_10.5029465786601_17.2519141842159 chr14 65097218 65098762 + 17.2519141842159 NA intron (NM_018788, intron 1 of 6) CpG 116 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak1_113_543_0.683648189486192_9.42928693599344_17.2467556400857 chr18 68299583 68301119 + 17.2467556400857 NA promoter-TSS (NM_153794) promoter-TSS (NM_153794) -4 NM_026440 67897 Mm.27544 NM_026440 ENSMUSG00000009535 Rnmt 2610002P10Rik|AI848273|Rg7mt1|mKIAA0398 RNA (guanine-7-) methyltransferase protein-coding common_peak2_63_209_1.03523236783176_8.231861701582_17.2461585581625 chr10 128636533 128637956 + 17.2461585581625 NA intron (NM_011772, intron 5 of 7) intron (NM_011772, intron 5 of 7) 8749 NM_011772 22781 Mm.358648 NM_011772 ENSMUSG00000002578 Ikzf4 A630026H08Rik|Eos|Zfpn1a4|Znfn1a4 IKAROS family zinc finger 4 protein-coding common_peak1_111_1260_-0.560563187937582_10.0200709663594_17.2459495968069 chr8 122284020 122285076 + 17.2459495968069 NA intron (NM_009569, intron 1 of 9) CpG 2407 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak2_14_221_-1.61237174493876_6.98822999388073_17.242994852903 chr15 81190997 81191572 + 17.242994852903 NA promoter-TSS (NM_001082536) promoter-TSS (NM_001082536) 431 NR_015603 67638 Mm.390832 NM_026288 ENSMUSG00000047938 4930483J18Rik - RIKEN cDNA 4930483J18 gene ncRNA common_peak2_79_307_0.877572309308587_8.7055726953492_17.2403627794151 chr2 31572133 31573450 + 17.2403627794151 NA 5' UTR (NM_001033389, exon 1 of 18) 5' UTR (NM_001033389, exon 1 of 18) 140 NM_001290548 320267 Mm.207261 NM_001033389 ENSMUSG00000026843 Fubp3 A330051M14Rik|AV006371|FBP3|Marta2 far upstream element (FUSE) binding protein 3 protein-coding unique_peak2_18_261_-1.43305879814056_7.31689360246717_17.2396755439793 chr7 113294649 113296026 + 17.2396755439793 NA intron (NM_001243048, intron 8 of 16) intron (NM_001243048, intron 8 of 16) 74002 NM_133700 68815 Mm.238034 NM_133700 ENSMUSG00000038187 Btbd10 1110056N09Rik|Gmrp1 BTB (POZ) domain containing 10 protein-coding common_peak1_65_221_1.00951639249713_8.29917406259867_17.2365454899242 chr12 85697922 85698880 + 17.2365454899242 NA intron (NM_016767, intron 2 of 2) CpG 11681 NM_016767 53314 Mm.6672 NM_016767 ENSMUSG00000034266 Batf B-ATF|SFA-2 basic leucine zipper transcription factor, ATF-like protein-coding unique_peak1_32_56_1.74442993349614_6.70510498091281_17.2351941261931 chr19 10693999 10694762 + 17.2351941261931 NA intron (NM_181403, intron 1 of 4) PB1D7|SINE|Alu 5565 NM_181403 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding common_peak2_258_3041_-0.347484677247616_11.3970620991007_17.2312433616078 chr4 46450209 46454289 + 17.2312433616078 NA intron (NM_130889, intron 1 of 6) CpG 1132 NM_130889 67628 Mm.263913 NM_130889 ENSMUSG00000028333 Anp32b 2410015B15Rik|PAL31|PHAPI2a|Ssp29 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B protein-coding common_peak2_54_159_1.15936292349855_7.90160955663664_17.2299576376418 chr12 78218805 78219985 + 17.2299576376418 NA Intergenic L1MA6|LINE|L1 -7260 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak1_76_870_-0.689807367825798_9.42162522468596_17.2287551203929 chr15 100551218 100552244 + 17.2287551203929 NA intron (NM_033476, intron 1 of 15) CpG 277 NM_033476 21422 Mm.219040 NM_033476 ENSMUSG00000009733 Tfcp2 CP-2|CP2|D230015P20Rik|LBP-1c|LBP-1d|LBP1|LSF|Tcfcp2|UBP-1 transcription factor CP2 protein-coding unique_peak2_26_342_-1.19985719933322_7.8221361665062_17.2274274989283 chr3 129589993 129591291 + 17.2274274989283 NA intron (NM_130450, intron 2 of 4) intron (NM_130450, intron 2 of 4) 58256 NM_130450 170439 Mm.314113 NM_130450 ENSMUSG00000041220 Elovl6 C77826|FAE|LCE ELOVL family member 6, elongation of long chain fatty acids (yeast) protein-coding common_peak2_140_1594_-0.492075105072928_10.3933031561158_17.2250090227489-2 chr8 54438842 54443575 + 17.2250090227489 NA Intergenic MTD|LTR|ERVL-MaLR 88790 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak2_140_1594_-0.492075105072928_10.3933031561158_17.2250090227489 chr19 4755533 4757476 + 17.2250090227489 NA promoter-TSS (NM_025717) promoter-TSS (NM_025717) -21 NM_025717 66704 Mm.396734 NM_025717 ENSMUSG00000033760 Rbm4b 4921506I22Rik|AI504630|AI506404|Lark2|Neosin RNA binding motif protein 4B protein-coding common_peak1_34_424_-1.04987331650153_8.2063823727743_17.2103059949821 chr16 55753674 55754350 + 17.2103059949821 NA Intergenic Intergenic 68126 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding unique_peak2_11_189_-1.78269245142521_6.67850938261834_17.2004602219519 chrX 151095892 151097020 + 17.2004602219519 NA promoter-TSS (NM_001164578) promoter-TSS (NM_001164578) 87 NM_001164578 69499 Mm.8142 NM_175146 ENSMUSG00000025264 Tsr2 2310007F12Rik TSR2 20S rRNA accumulation protein-coding common_peak1_33_60_1.69941123459764_6.78044295486171_17.1976674332595 chr1 138247245 138247957 + 17.1976674332595 NA Intergenic Intergenic -26137 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_40_486_-0.966334697016916_8.44461061357388_17.1957468701199-2 chr9 118416212 118416903 + 17.1957468701199 NA Intergenic Intergenic -13282 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak1_40_486_-0.966334697016916_8.44461061357388_17.1957468701199 chr14 20174087 20175012 + 17.1957468701199 NA intron (NM_021542, intron 1 of 4) B1_Mm|SINE|Alu 7233 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak1_16_241_-1.51532697630042_7.16119974912438_17.1945869062318 chr15 80233380 80233800 + 17.1945869062318 NA promoter-TSS (NM_178719) promoter-TSS (NM_178719) -490 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak2_356_2840_0.319023770203385_11.6316950012912_17.1933923424906 chr19 46703937 46709365 + 17.1933923424906 NA promoter-TSS (NM_020577) promoter-TSS (NM_020577) -792 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak2_123_619_0.64378242183278_9.59801561619063_17.19032384708 chr10 81648611 81649860 + 17.19032384708 NA intron (NM_001142963, intron 1 of 3).2 CpG 166 NM_001142963 100233208 Mm.327168 NM_001142963 ENSMUSG00000096856 Gm10778 ENSMUSG00000074860 predicted gene 10778 protein-coding common_peak1_29_373_-1.13823802728993_7.97777544624267_17.187721073409 chr10 80029637 80030140 + 17.187721073409 NA intron (NM_001142701, intron 21 of 22) B1_Mur4|SINE|Alu 9771 NM_025554 66420 Mm.18579 NM_025554 ENSMUSG00000004667 Polr2e 2410021N14Rik|25kDa|AW208866|RPB5|XAP4 polymerase (RNA) II (DNA directed) polypeptide E protein-coding unique_peak2_29_373_-1.13823802728993_7.97777544624267_17.187721073409 chr15 103360845 103362341 + 17.187721073409 NA intron (NM_001314041, intron 1 of 30) intron (NM_001314041, intron 1 of 30) 5198 NM_010577 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak1_147_1675_-0.477798160115228_10.4719073536417_17.1864237854934 chr11 70811548 70813133 + 17.1864237854934 NA intron (NM_001045526, intron 1 of 4) intron (NM_001045526, intron 1 of 4) 221 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak1_384_3149_0.303691014376746_11.772981620463_17.1843055642654 chr17 35377844 35381185 + 17.1843055642654 NA promoter-TSS (NM_001143689) promoter-TSS (NM_001143689) -103 NM_001143689 15015 Mm.464284 NM_001143689 ENSMUSG00000035929 H2-Q4 H-2Q4|H2-Gs10|Qa-4|Qa4|Qat-4|Qb-1|Qb1 histocompatibility 2, Q region locus 4 protein-coding common_peak1_153_859_0.555141002369963_10.0257633507744_17.1813023751246 chr4 132883527 132885013 + 17.1813023751246 NA exon (NM_133887, exon 1 of 9) exon (NM_133887, exon 1 of 9) 188 NM_133887 100226 Mm.28237 NM_133887 ENSMUSG00000028879 Stx12 AI850350|AU041521|Stx13 syntaxin 12 protein-coding common_peak1_106_1202_-0.573450507820302_9.94569567326592_17.1807955063477 chr14 56810566 56811809 + 17.1807955063477 NA intron (NM_144842, intron 1 of 7) CpG 277 NM_001253753 219105 Mm.473172 NM_144842 ENSMUSG00000040123 Zmym5 9830124H08Rik zinc finger, MYM-type 5 protein-coding common_peak2_160_917_0.539646569945171_10.1121736283864_17.1728684589509 chr2 43747861 43751280 + 17.1728684589509 NA intron (NM_001301832, intron 1 of 14) intron (NM_001301832, intron 1 of 14) 746 NM_001301831 76117 Mm.217350 NM_153820 ENSMUSG00000049744 Arhgap15 5830480G12Rik Rho GTPase activating protein 15 protein-coding common_peak2_60_697_-0.78256377516268_9.05580133862831_17.1711409581581 chr9 88955289 88957638 + 17.1711409581581 NA promoter-TSS (NM_009742) promoter-TSS (NM_009742) -457 NM_009742 12044 Mm.425593 NM_009742 ENSMUSG00000102037 Bcl2a1a A1|BB218357|Bcl2a1|Bfl-1|Hbpa1 B cell leukemia/lymphoma 2 related protein A1a protein-coding common_peak1_272_1959_0.37984161987076_11.126558748938_17.1704196675033 chr17 51830915 51834485 + 17.1704196675033 NA promoter-TSS (NM_009122) promoter-TSS (NM_009122) -53 NM_009122 20230 Mm.311655 NM_009122 ENSMUSG00000023927 Satb1 2610306G12Rik|AW413156 special AT-rich sequence binding protein 1 protein-coding common_peak1_50_591_-0.861782588501493_8.7785620713782_17.1699940330954 chr2 102873033 102873982 + 17.1699940330954 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 28158 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak2_50_591_-0.861782588501493_8.7785620713782_17.1699940330954 chr7 44304177 44306174 + 17.1699940330954 NA intron (NM_009131, intron 3 of 3) intron (NM_009131, intron 3 of 3) 1784 NM_009131 20256 Mm.20428 NM_009131 ENSMUSG00000004473 Clec11a AW457320|Clecsf3|Scgf C-type lectin domain family 11, member a protein-coding common_peak2_111_1259_-0.559418645996642_10.019498695389_17.1699291261513 chr4 40832284 40835489 + 17.1699291261513 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) 16252 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA common_peak2_58_676_-0.797485618533171_9.00426921430841_17.1689883702185 chr17 35840531 35842465 + 17.1689883702185 NA promoter-TSS (NM_001010833) promoter-TSS (NM_001010833) 0 NM_001010833 240087 Mm.218511 NM_001010833 ENSMUSG00000061607 Mdc1 6820401C03|AA413496|Nfbd1|mKIAA0170 mediator of DNA damage checkpoint 1 protein-coding common_peak2_190_2191_-0.413660576973733_10.8912017944737_17.1675406922341 chr14 54136253 54143147 + 17.1675406922341 NA Intergenic PB1D10|SINE|Alu 114229 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_52_611_-0.841646077249539_8.83656480406788_17.1596337003973 chr4 149773404 149774301 + 17.1596337003973 NA intron (NM_027460, intron 1 of 6) CpG 415 NM_027460 70556 Mm.41877 NM_027460 ENSMUSG00000028982 Slc25a33 5730438N18Rik|Pnc1 solute carrier family 25, member 33 protein-coding common_peak2_182_1107_0.494911801151067_10.3611980666247_17.1586246679887 chr11 3451466 3453253 + 17.1586246679887 NA promoter-TSS (NR_028317) promoter-TSS (NR_028317) -78 NR_028317 71523 Mm.72795 NM_027820 ENSMUSG00000034587 8430429K09Rik - RIKEN cDNA 8430429K09 gene ncRNA common_peak1_192_2215_-0.41093687360293_10.9082737292477_17.1553597197047 chr5 65536536 65538283 + 17.1553597197047 NA 5' UTR (NM_016786, exon 1 of 7) 5' UTR (NM_016786, exon 1 of 7) 164 NM_016786 53323 Mm.319512 NM_016786 ENSMUSG00000029203 Ube2k AW492011|D5Ertd601e|E2-25k|HIP-2|Hip2|Hypg|Lig ubiquitin-conjugating enzyme E2K protein-coding common_peak2_197_2276_-0.404851801136102_10.9504926755686_17.1544636299781 chr4 40702132 40704249 + 17.1544636299781 NA promoter-TSS (NM_001025445) promoter-TSS (NM_001025445) 4 NM_001025444 66408 Mm.430710 NM_025545 ENSMUSG00000028411 Aptx 2410016G21Rik|AA388047|FHA-HIT aprataxin protein-coding common_peak1_45_538_-0.90906834747264_8.61960728901619_17.1492375359336 chr7 44815305 44816040 + 17.1492375359336 NA promoter-TSS (NM_053074) promoter-TSS (NM_053074) -14 NM_030693 107503 Mm.389890 NM_030693 ENSMUSG00000038539 Atf5 AFTA|Atf7|Atfx|ODA-10 activating transcription factor 5 protein-coding common_peak1_30_383_-1.11828029598685_8.02582235272773_17.1489310200438 chr10 8203971 8204614 + 17.1489310200438 NA TTS (NM_177387) TTS (NM_177387) -248169 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_173_1029_0.510981519781629_10.2639193819614_17.1480991393686 chr15 28023974 28026357 + 17.1480991393686 NA intron (NM_001081302, intron 1 of 56) CpG 683 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_252_1761_0.398844008300948_10.9824202130709_17.1479372453443 chr18 5333408 5335538 + 17.1479372453443 NA promoter-TSS (NM_178722) promoter-TSS (NM_178722) -34 NM_178722 240186 Mm.118257 NM_178722 ENSMUSG00000050945 Zfp438 9430031G09|9430091M14Rik|B830013J05Rik zinc finger protein 438 protein-coding common_peak1_114_551_0.678041934193661_9.447545423875_17.1443929943652 chr1 53312967 53314035 + 17.1443929943652 NA promoter-TSS (NM_001285839) promoter-TSS (NM_001285839) -123 NR_104361 72085 Mm.482256 NM_028091 ENSMUSG00000026096 Osgepl1 2610001M19Rik|AA416452 O-sialoglycoprotein endopeptidase-like 1 protein-coding unique_peak1_22_22_2.4148988480365_5.73101138007526_17.1436467280044 chr11 87726248 87726804 + 17.1436467280044 NA intron (NM_172448, intron 3 of 9) intron (NM_172448, intron 3 of 9) -11039 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding common_peak2_78_301_0.883694351788238_8.6802519152192_17.1425321866843 chr4 120404916 120406141 + 17.1425321866843 NA intron (NM_001159630, intron 1 of 17) CpG 247 NM_013883 29871 Mm.427014 NM_013883 ENSMUSG00000000085 Scmh1 AI315320|AI851618|Scml1|Scml3 sex comb on midleg homolog 1 protein-coding common_peak2_82_327_0.851953864550264_8.78352893689322_17.1322065469086 chr2 165856929 165859341 + 17.1322065469086 NA promoter-TSS (NM_001252585) promoter-TSS (NM_001252585) 38 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak1_29_45_1.88509447654069_6.46610919432736_17.1190899357619 chr13 30955987 30956640 + 17.1190899357619 NA intron (NM_025588, intron 1 of 27) MTE2a|LTR|ERVL-MaLR -8552 NM_153072 210554 Mm.450571 NM_153072 ENSMUSG00000076430 Hus1b - HUS1 checkpoint clamp component B protein-coding unique_peak1_21_19_2.53786964780659_5.59086291879066_17.1184658319019 chr14 99943339 99943848 + 17.1184658319019 NA intron (NM_010636, intron 4 of 6) intron (NM_010636, intron 4 of 6) 206203 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding common_peak2_303_2277_0.353261416434204_11.3301827399252_17.1172578216786 chr6 71270633 71273012 + 17.1172578216786 NA promoter-TSS (NM_145568) promoter-TSS (NM_145568) 151 NR_106192 102465900 NR_106192 ENSMUSG00000098623 Mir8112 Gm27739|mmu-mir-8112 microRNA 8112 ncRNA common_peak2_226_1511_0.42770232276666_10.7760935856044_17.1172305709884 chr7 130518760 130520461 + 17.1172305709884 NA promoter-TSS (NM_001136054) promoter-TSS (NM_001136054) -30 NM_013799 11907 Mm.216321 NM_013799 ENSMUSG00000030850 Ate1 AI225793|AW547406 arginyltransferase 1 protein-coding common_peak1_41_95_1.4191244542637_7.29452472785301_17.1171261236665 chr10 120201681 120202252 + 17.1171261236665 NA promoter-TSS (NM_028679) promoter-TSS (NM_028679) -429 NM_028679 73914 Mm.146194 NM_028679 ENSMUSG00000020227 Irak3 4833428C18Rik|AI563835|IRAK-M interleukin-1 receptor-associated kinase 3 protein-coding common_peak1_81_923_-0.663693465164275_9.51990230883392_17.1137333088305 chr2 157134173 157135227 + 17.1137333088305 NA intron (NM_001139520, intron 1 of 16) CpG 522 NM_001139520 56045 Mm.248478 NM_018851 ENSMUSG00000027639 Samhd1 E330031J07Rik|Mg11 SAM domain and HD domain, 1 protein-coding common_peak2_370_2995_0.310455966249831_11.7040498915837_17.1096958382509 chr14 74944318 74949876 + 17.1096958382509 NA intron (NM_001252132, intron 1 of 18) CpG 780 NM_001252132 380916 Mm.288868 NM_001033439 ENSMUSG00000068015 Lrch1 4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding common_peak2_168_986_0.520907574073012_10.2073600614929_17.1069310948275 chr15 99647603 99651709 + 17.1069310948275 NA intron (NM_012025, intron 1 of 17) intron (NM_012025, intron 1 of 17) 2000 NM_001253808 26934 Mm.273804 NM_012025 ENSMUSG00000023015 Racgap1 AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478 Rac GTPase-activating protein 1 protein-coding common_peak1_56_653_-0.80864810594791_8.94882277252413_17.1063150282041 chr19 53397014 53398068 + 17.1063150282041 NA Intergenic B1F|SINE|Alu -6968 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak1_454_3951_0.272083398013688_12.0844089305915_17.1052266492193 chr15 86181041 86184436 + 17.1052266492193 NA intron (NM_145475, intron 1 of 12) intron (NM_145475, intron 1 of 12) 3403 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding common_peak1_20_281_-1.3620767086003_7.45851299809865_17.1023174192288 chr11 96454597 96455141 + 17.1023174192288 NA intron (NR_033524, intron 2 of 2) intron (NR_033524, intron 2 of 2) 9678 NR_033524 100038600 Mm.483549 NR_033524 Gm11529 OTTMUSG00000001775 predicted gene 11529 ncRNA common_peak2_112_1269_-0.555093283487128_10.033066139916_17.101188013248 chr3 132870691 132874336 + 17.101188013248 NA intron (NR_102297, intron 1 of 3) B3|SINE|B2 6083 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA unique_peak2_32_403_-1.08089153509092_8.11776571520634_17.0990058404229 chr18 84798590 84800248 + 17.0990058404229 NA Intergenic Intergenic -51995 NM_025797 109672 Mm.31018 NM_025797 ENSMUSG00000024646 Cyb5a 0610009N12Rik|Cyb5 cytochrome b5 type A (microsomal) protein-coding common_peak1_74_847_-0.697770746273532_9.37903508142643_17.0985788787339 chr12 21225250 21226557 + 17.0985788787339 NA intron (NM_001135192, intron 13 of 28) ID2|SINE|ID 60334 NM_008403 16413 Mm.273333 NM_008403 ENSMUSG00000062352 Itgb1bp1 AI449260|AU019480|Icap1 integrin beta 1 binding protein 1 protein-coding common_peak1_28_362_-1.15516242348318_7.92624452625416_17.0972254819779 chr10 83161910 83162534 + 17.0972254819779 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 175595 NM_177388 338365 Mm.67073 NM_177388 ENSMUSG00000034591 Slc41a2 A230035L05Rik|SLC41A1-L1 solute carrier family 41, member 2 protein-coding unique_peak2_25_332_-1.22395712243033_7.7673998058561_17.0917105114871 chr17 29531129 29532625 + 17.0917105114871 NA intron (NM_001162902, intron 1 of 1) intron (NM_001162902, intron 1 of 1) 17716 NM_001162901 71138 Mm.158581 NM_001162901 ENSMUSG00000079580 Tmem217 4933413N12Rik|EG622644 transmembrane protein 217 protein-coding common_peak1_275_1991_0.375818010551423_11.1479109373438_17.0916757430518 chr6 108551192 108554685 + 17.0916757430518 NA Intergenic Intergenic 63195 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_164_952_0.52909313062926_10.1608789692246_17.0912308381838 chr11 62878716 62880293 + 17.0912308381838 NA promoter-TSS (NM_026210) promoter-TSS (NM_026210) 14 NM_026210 67510 Mm.9806 NM_026210 ENSMUSG00000014177 Tvp23b 1810036I24Rik|Fam18b|Fam18b1 trans-golgi network vesicle protein 23B protein-coding common_peak1_178_2044_-0.428340542406342_10.7837148566259_17.091184087576 chr2 53190514 53192781 + 17.091184087576 NA promoter-TSS (NM_018785) promoter-TSS (NM_018785) -437 NM_022989 65103 Mm.37623 NM_022989 ENSMUSG00000026960 Arl6ip6 2310057C01Rik|2610529A11Rik|Aip-6 ADP-ribosylation factor-like 6 interacting protein 6 protein-coding common_peak2_51_601_-0.851586120932414_8.80782661629349_17.0900973643911 chr19 11355178 11357746 + 17.0900973643911 NA Intergenic Intergenic -19026 NM_001310331 666907 NM_001310331 ENSMUSG00000101389 Ms4a4a EG666907 membrane-spanning 4-domains, subfamily A, member 4A protein-coding common_peak1_51_601_-0.851586120932414_8.80782661629349_17.0900973643911 chr19 12009920 12010926 + 17.0900973643911 NA Intergenic Intergenic 26317 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding common_peak1_79_308_0.872895822099114_8.70791093895393_17.0879748182139 chr13 76098172 76099282 + 17.0879748182139 NA promoter-TSS (NM_001081352) promoter-TSS (NM_001081352) -7 NM_001081352 218343 Mm.277964 NM_001081352 ENSMUSG00000033991 Ttc37 mKIAA0372 tetratricopeptide repeat domain 37 protein-coding common_peak1_33_413_-1.0633383853388_8.16181776482993_17.0862568940326 chr7 127708247 127708985 + 17.0862568940326 NA TTS (NR_030428) TTS (NR_030428) 129 NR_030428 791073 NR_030428 ENSMUSG00000076454 Mir762 Mirn762|mir-762|mmu-mir-762 microRNA 762 ncRNA common_peak1_126_1430_-0.520597262552622_10.2225093254504_17.080872372626 chr9 21014972 21016859 + 17.080872372626 NA promoter-TSS (NM_010493) promoter-TSS (NM_010493) -45 NM_010493 15894 Mm.435508 NM_010493 ENSMUSG00000037405 Icam1 CD54|Icam-1|Ly-47|MALA-2 intercellular adhesion molecule 1 protein-coding common_peak1_18_260_-1.42754179317299_7.31413509998339_17.0761139918908 chr6 8258636 8259096 + 17.0761139918908 NA promoter-TSS (NM_001302354) promoter-TSS (NM_001302354) 275 NM_026632 68240 Mm.29073 NM_026632 ENSMUSG00000012483 Rpa3 14kDa|C330026P08Rik replication protein A3 protein-coding common_peak1_57_176_1.10767007561593_8.02144058789096_17.0760391364358 chr1 144302672 144303622 + 17.0760391364358 NA Intergenic Lx3B|LINE|L1 -54043 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak2_394_3263_0.297779336020142_11.8213150099816_17.0757307451175 chr5 107722805 107727386 + 17.0757307451175 NA promoter-TSS (NM_010278) promoter-TSS (NM_010278) 710 NM_001267621 14581 Mm.2078 NM_010278 ENSMUSG00000029275 Gfi1 AW495828|Gfi-1|Pal-1|Pal1 growth factor independent 1 protein-coding common_peak2_147_810_0.569450169366851_9.9482831889007_17.069307397936 chr2 170510931 170512046 + 17.069307397936 NA non-coding (NR_040367, exon 1 of 3) non-coding (NR_040367, exon 1 of 3) 258 NM_001199902 109054 Mm.28808 NM_001013369 ENSMUSG00000052033 Pfdn4 0610025M10Rik|1810063B06Rik|C-1|C1|Pfd4 prefoldin 4 protein-coding common_peak1_153_1745_-0.466503991670018_10.5365858477944_17.0692531170098 chr3 88454203 88456065 + 17.0692531170098 NA intron (NM_001163489, intron 1 of 14) intron (NM_001163489, intron 1 of 14) 627 NM_013658 20351 Mm.439752 NM_013658 ENSMUSG00000028064 Sema4a AI132332|SemB|Semab sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A protein-coding common_peak1_281_2052_0.370360002657055_11.1886979134371_17.0692138941479 chr9 111056172 111059032 + 17.0692138941479 NA promoter-TSS (NM_017466) promoter-TSS (NM_017466) -84 NM_001302376 54199 Mm.7336 NM_017466 ENSMUSG00000043953 Ccrl2 1810047I05Rik|Ackr5|CCR11|Cmkbr1l2|E01|L-CCR chemokine (C-C motif) receptor-like 2 protein-coding common_peak2_73_270_0.924246921043895_8.54427250187582_17.0680129381239 chr10 60370122 60372004 + 17.0680129381239 NA 3' UTR (NM_028732, exon 7 of 7) 3' UTR (NM_028732, exon 7 of 7) 24212 NM_028732 74048 Mm.273584 NM_028732 ENSMUSG00000020101 Vsir 4632428N05Rik|Dies1|PD-1H|VISTA V-set immunoregulatory receptor protein-coding common_peak1_497_4462_0.256454605256135_12.2520253938799_17.0678034546976 chr16 94568483 94571763 + 17.0678034546976 NA promoter-TSS (NM_001113389) promoter-TSS (NM_001113389) -83 NM_007890 13548 Mm.310973 NM_007890 ENSMUSG00000022897 Dyrk1a 2310043O08Rik|D16Ertd272e|D16Ertd493e|Dyrk|ENSMUSG00000074897|Gm10783|Mnbh|Mp86|mmb dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a protein-coding common_peak1_14_220_-1.60585843798008_6.98497334040139_17.0661645311349 chr9 72530799 72531213 + 17.0661645311349 NA intron (NR_045735, intron 1 of 2) intron (NR_045735, intron 1 of 2) 852 NR_045735 75115 Mm.280755 NR_045735 ENSMUSG00000096986 4930509E16Rik - RIKEN cDNA 4930509E16 gene ncRNA unique_peak2_14_220_-1.60585843798008_6.98497334040139_17.0661645311349 chr9 44043243 44044421 + 17.0661645311349 NA intron (NM_009382, intron 1 of 3) intron (NM_009382, intron 1 of 3) 448 NM_009382 21838 Mm.3951 NM_009382 ENSMUSG00000032011 Thy1 CD90|T25|Thy-1|Thy-1.2|Thy1.1|Thy1.2 thymus cell antigen 1, theta protein-coding common_peak1_173_1030_0.5095815244841_10.2646193796102_17.0642499749164 chr17 3079231 3081221 + 17.0642499749164 NA intron (NR_003519, intron 2 of 7) intron (NR_003519, intron 2 of 7) 3957 NR_003519 328734 Mm.335641 NR_003519 Pisd-ps2 D030013I16Rik phosphatidylserine decarboxylase, pseudogene 2 pseudo common_peak1_185_2128_-0.418531202378349_10.8466946332631_17.0623576321784 chr15 38518296 38519453 + 17.0623576321784 NA intron (NM_018745, intron 1 of 11) CpG 392 NM_001301688 54375 Mm.250214 NM_018745 ENSMUSG00000037458 Azin1 1700085L02Rik|AZI|Oazi|Oazin antizyme inhibitor 1 protein-coding unique_peak2_2_93_-3.22065031714461_4.94426369310533_17.0537996199373 chr6 113073793 113074601 + 17.0537996199373 NA intron (NR_027009, intron 1 of 1) intron (NR_027009, intron 1 of 1) 3047 NR_027010 14910 Mm.280950 NR_027008 ENSMUSG00000086429 Gt(ROSA)26Sor AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26|Thumpd3as1 gene trap ROSA 26, Philippe Soriano ncRNA common_peak1_12_199_-1.71504725632015_6.78633256161465_17.0526405370748 chr19 41911531 41911826 + 17.0526405370748 NA promoter-TSS (NM_023418) promoter-TSS (NM_023418) -193 NM_023418 18648 Mm.16783 NM_023418 ENSMUSG00000011752 Pgam1 2310050F24Rik|Pgam-1 phosphoglycerate mutase 1 protein-coding common_peak1_89_1011_-0.630202625943323_9.66789226172265_17.0525324752715 chr13 93763252 93764797 + 17.0525324752715 NA Intergenic Intergenic -7655 NM_009712 11881 Mm.300178 NM_009712 ENSMUSG00000042082 Arsb 1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B protein-coding common_peak2_85_347_0.829395985591576_8.85764148864452_17.0513237919673 chr6 43265195 43266666 + 17.0513237919673 NA intron (NM_133674, intron 1 of 14) intron (NM_133674, intron 1 of 14) 286 NM_133674 54324 Mm.320978 NM_133674 ENSMUSG00000033542 Arhgef5 2210412D05Rik|AA717842|AW495314|Tim1 Rho guanine nucleotide exchange factor (GEF) 5 protein-coding common_peak1_29_372_-1.13437538765753_7.97584412642647_17.0499646121085 chr2 32723795 32724517 + 17.0499646121085 NA intron (NR_045535, intron 1 of 12) B4A|SINE|B4 3101 NM_013781 27387 Mm.9593 NM_013781 ENSMUSG00000059013 Sh2d3c Chat|Nsp3|Shep1 SH2 domain containing 3C protein-coding common_peak1_90_381_0.794916214684299_8.9748869353779_17.048909926078 chr2 166615190 166616401 + 17.048909926078 NA intron (NM_177782, intron 7 of 39) intron (NM_177782, intron 7 of 39) -56923 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak2_197_1243_0.467296004869917_10.5144187725656_17.0485653951978 chr10 117857744 117861782 + 17.0485653951978 NA Intergenic Intergenic -13789 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak1_49_134_1.23581190627191_7.69472155018679_17.0478826369724 chr4 132756633 132757568 + 17.0478826369724 NA promoter-TSS (NM_133888) promoter-TSS (NM_133888) 71 NM_133888 100340 Mm.287187 NM_133888 ENSMUSG00000028885 Smpdl3b 1110054A24Rik|AU045240|Asml3b sphingomyelin phosphodiesterase, acid-like 3B protein-coding common_peak1_76_868_-0.686490826041334_9.41996695379373_17.0464776811681 chr4 136285472 136286493 + 17.0464776811681 NA promoter-TSS (NM_009557) promoter-TSS (NM_009557) -87 NM_009557 22704 Mm.1504 NM_009557 ENSMUSG00000051351 Zfp46 AI426962|Mlz-4|Zfp-46|Znf436 zinc finger protein 46 protein-coding common_peak1_313_2383_0.344919425129845_11.3916282330271_17.0361702031632 chr19 47917861 47920210 + 17.0361702031632 NA intron (NM_001001738, intron 1 of 1) CpG 264 NM_001001738 414801 Mm.29457 NM_001001738 ENSMUSG00000044948 Itprip 4833424O12Rik|DANGER|mKIAA1754 inositol 1,4,5-triphosphate receptor interacting protein protein-coding common_peak1_204_2360_-0.395633474284896_11.0073655890862_17.0360601310546 chr17 87364089 87366686 + 17.0360601310546 NA intron (NM_028639, intron 18 of 19) MLT1J|LTR|ERVL-MaLR 62354 NM_029298 75467 Mm.50108 NM_029298 ENSMUSG00000036557 Stpg4 1700011E24Rik|GSE sperm tail PG rich repeat containing 4 protein-coding common_peak2_722_7321_0.201963953103384_12.9390040348562_17.0348861636112 chr8 70693244 70702019 + 17.0348861636112 NA promoter-TSS (NM_010592) promoter-TSS (NM_010592) -108 NM_010592 16478 Mm.419851 NM_010592 ENSMUSG00000071076 Jund Jund1 jun D proto-oncogene protein-coding common_peak1_117_1326_-0.541813939142012_10.1030456857992_17.0273018159013 chr1 92180484 92181415 + 17.0273018159013 NA promoter-TSS (NM_207225) promoter-TSS (NM_207225) -608 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_16_240_-1.50935307525579_7.15821279860207_17.0249929648241 chr9 108145731 108146176 + 17.0249929648241 NA intron (NM_007567, intron 1 of 11) RMER10A|LTR|ERVL 9098 NR_126077 76873 Mm.436935 NR_126077 ENSMUSG00000102224 4930447F24Rik - RIKEN cDNA 4930447F24 gene ncRNA common_peak1_145_1650_-0.480193067341272_10.4490278712426_17.0157979733966 chr7 81570662 81572353 + 17.0157979733966 NA exon (NM_001004185, exon 1 of 10) exon (NM_001004185, exon 1 of 10) 215 NM_001004185 434204 Mm.181641 NM_001004185 ENSMUSG00000045795 Whamm BB081391|Whdc1|mKIAA1971 WAS protein homolog associated with actin, golgi membranes and microtubules protein-coding common_peak1_71_258_0.941101696558825_8.48735913596597_17.0157375809122 chr12 82226085 82226949 + 17.0157375809122 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 56501 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak2_92_395_0.78146010080798_9.0200866704836_17.0083373636874 chr12 21315899 21317081 + 17.0083373636874 NA promoter-TSS (NM_026347) promoter-TSS (NM_026347) 98 NM_026347 67732 Mm.335830 NM_026347 ENSMUSG00000062054 Iah1 1500019E20Rik|4833421E05Rik isoamyl acetate-hydrolyzing esterase 1 homolog protein-coding unique_peak2_56_652_-0.806440461996258_8.9477189505483_17.0016402065298 chr6 47658815 47660652 + 17.0016402065298 NA promoter-TSS (NR_002841).3 promoter-TSS (NR_002841).3 -318 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_523_4779_0.247516981351474_12.3465533935438_16.9973516174397 chr7 75608023 75613940 + 16.9973516174397 NA exon (NM_029332, exon 7 of 37) exon (NM_029332, exon 7 of 37) 155447 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_123_1394_-0.526142579609532_10.1829781169118_16.9901821187709 chr17 46889037 46890371 + 16.9901821187709 NA promoter-TSS (NM_178385) promoter-TSS (NM_178385) -917 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding common_peak2_398_3310_0.294983533418643_11.8405430621063_16.9873413808304 chr2 128123563 128129085 + 16.9873413808304 NA intron (NM_001291016, intron 1 of 3) CpG 286 NM_009754 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_56_171_1.11823396484808_7.98538173712614_16.9852753427588 chr5 21045588 21047125 + 16.9852753427588 NA intron (NM_011203, intron 1 of 17) L3|LINE|CR1 9441 NM_011203 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak2_56_171_1.11823396484808_7.98538173712614_16.9852753427588-2 chr8 11203601 11204588 + 16.9852753427588 NA intron (NM_009931, intron 49 of 51) intron (NM_009931, intron 49 of 51) -108711 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak1_42_505_-0.93726640444036_8.51436037247413_16.9813239975245 chr8 122701360 122702209 + 16.9813239975245 NA Intergenic Intergenic -2675 NM_009824 12398 Mm.194339 NM_009824 ENSMUSG00000006362 Cbfa2t3 A630044F12Rik|AI465270|AW229127|Cbfa2t3h|ETO-2|Eto2|MTGR2 core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) protein-coding common_peak1_697_6991_0.206223138950024_12.8746010389756_16.9812719325646 chr15 78447590 78453115 + 16.9812719325646 NA intron (NM_027902, intron 10 of 17) MLT1A1|LTR|ERVL-MaLR 18282 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak1_155_1767_-0.461734487410858_10.557035315686_16.9748447008977 chr5 112276661 112277720 + 16.9748447008977 NA intron (NM_009419, intron 1 of 6) intron (NM_009419, intron 1 of 6) 483 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_492_4405_0.257141777406115_12.2338246684039_16.968297142736 chr15 96695282 96700773 + 16.968297142736 NA exon (NM_175121, exon 4 of 16) exon (NM_175121, exon 4 of 16) 1671 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_142_771_0.579733309314348_9.88232369192525_16.9590378533646 chr4 32335874 32337419 + 16.9590378533646 NA Intergenic Intergenic -80789 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_84_955_-0.649224960128256_9.57625432791662_16.9524473827799 chr4 40757163 40758117 + 16.9524473827799 NA intron (NM_021535, intron 1 of 11) CpG 245 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding common_peak1_239_1638_0.409893227057314_10.8835467526281_16.9501853164821 chr10 11280264 11282026 + 16.9501853164821 NA promoter-TSS (NM_027968) promoter-TSS (NM_027968) -185 NM_027968 71865 Mm.276229 NM_027968 ENSMUSG00000047648 Fbxo30 1700026A16Rik|MUSA1 F-box protein 30 protein-coding common_peak1_20_280_-1.35695167642243_7.45595048200971_16.9449757075081 chr18 73765271 73765809 + 16.9449757075081 NA Intergenic Intergenic -11061 NM_053255 114615 Mm.50642 NM_053255 ENSMUSG00000036941 Elac1 2610018O07Rik|8430417G19Rik elaC ribonuclease Z 1 protein-coding common_peak2_97_430_0.751944489007942_9.12751630359307_16.943871309022 chr1 128604930 128607224 + 16.943871309022 NA Intergenic Intergenic -13778 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak2_52_609_-0.836923667007136_8.83420359894668_16.9432753019035 chr14 100209938 100212177 + 16.9432753019035 NA Intergenic Intergenic -61261 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding common_peak2_81_921_-0.660567364177556_9.51833925834056_16.9372845816371 chr10 67606632 67608861 + 16.9372845816371 NA Intergenic Intergenic -58791 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_188_1163_0.480868333196783_10.4253095095067_16.9358087823613 chr2 34371002 34372766 + 16.9358087823613 NA exon (NM_016768, exon 1 of 9) exon (NM_016768, exon 1 of 9) 161 NM_001290576 18516 Mm.239941 NM_016768 ENSMUSG00000038718 Pbx3 - pre B cell leukemia homeobox 3 protein-coding common_peak2_119_591_0.652427689341467_9.53566721029968_16.933936585304 chr1 53312887 53314310 + 16.933936585304 NA promoter-TSS (NM_001285839) promoter-TSS (NM_001285839) -26 NR_104361 72085 Mm.482256 NM_028091 ENSMUSG00000026096 Osgepl1 2610001M19Rik|AA416452 O-sialoglycoprotein endopeptidase-like 1 protein-coding common_peak1_205_1317_0.454025539955046_10.5911474249856_16.9329895256904 chr8 119811563 119813703 + 16.9329895256904 NA intron (NM_028071, intron 3 of 3) intron (NM_028071, intron 3 of 3) 27946 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak1_46_547_-0.89490099553451_8.65058158519327_16.9320675199759 chr4 155200161 155200903 + 16.9320675199759 NA intron (NM_011385, intron 1 of 6) PB1D9|SINE|Alu 22003 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_92_1043_-0.617089275682295_9.71936135872874_16.9302206153377 chr3 90432656 90433700 + 16.9302206153377 NA 5' UTR (NM_178876, exon 1 of 31) 5' UTR (NM_178876, exon 1 of 31) 458 NM_145540 229543 Mm.268564 NM_145540 ENSMUSG00000027933 Ints3 C77668 integrator complex subunit 3 protein-coding common_peak1_192_2211_-0.408330377788449_10.9069704813405_16.9266411432664 chr17 45571906 45574461 + 16.9266411432664 NA promoter-TSS (NM_008302) promoter-TSS (NM_008302) 78 NM_008302 15516 Mm.2180 NM_008302 ENSMUSG00000023944 Hsp90ab1 90kDa|AL022974|C81438|Hsp84|Hsp84-1|Hsp90|Hspcb heat shock protein 90 alpha (cytosolic), class B member 1 protein-coding common_peak2_456_3979_0.269659450725534_12.0933824407938_16.9201494715401 chr9 57763641 57766718 + 16.9201494715401 NA exon (NM_007713, exon 1 of 13) exon (NM_007713, exon 1 of 13) 681 NM_007713 102414 Mm.25720 NM_007713 ENSMUSG00000032316 Clk3 AI256811 CDC-like kinase 3 protein-coding common_peak1_131_1485_-0.506673830505004_10.2838814852861_16.9194553204009 chr4 133886675 133888468 + 16.9194553204009 NA exon (NM_001285505, exon 1 of 22) exon (NM_001285505, exon 1 of 22) 226 NM_001285505 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_122_1381_-0.526964119169548_10.1690598408035_16.9176279034021 chr1 78536879 78539102 + 16.9176279034021 NA exon (NM_026713, exon 7 of 7) exon (NM_026713, exon 7 of 7) 26930 NM_026713 68393 Mm.41325 NM_026713 ENSMUSG00000012187 Mogat1 0610030A14Rik|1110064N14Rik|Dgat2l|Dgat2l1|MGAT1|WI1-2612I11.1|mDC2 monoacylglycerol O-acyltransferase 1 protein-coding unique_peak1_19_14_2.78424363202226_5.29901241161965_16.9118203081769 chr12 111906242 111906752 + 16.9118203081769 NA intron (NM_011625, intron 1 of 16) intron (NM_011625, intron 1 of 16) 1558 NM_011625 21981 Mm.313076 NM_011625 ENSMUSG00000021285 Ppp1r13b AI449786|ASPP1|AW545810|Tp53bp2|Trp53bp2|p85 protein phosphatase 1, regulatory (inhibitor) subunit 13B protein-coding common_peak2_76_290_0.891846197864783_8.63079844184067_16.9091594197275 chr16 23609229 23610560 + 16.9091594197275 NA promoter-TSS (NM_023386) promoter-TSS (NM_023386) -25 NM_023386 67775 Mm.475107 NM_023386 ENSMUSG00000033355 Rtp4 5830458K16Rik|Ifrg28 receptor transporter protein 4 protein-coding common_peak1_85_348_0.825256255230652_8.85971135382498_16.9085561880016 chr8 73353595 73354675 + 16.9085561880016 NA Intergenic Intergenic -1579 NM_010687 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak2_109_516_0.693882859257338_9.3609618999436_16.904791061231 chr1 127347284 127349720 + 16.904791061231 NA intron (NM_145128, intron 4 of 17) intron (NM_145128, intron 4 of 17) 143516 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_126_645_0.626820339480121_9.64880052443398_16.8990922923233 chr4 126252002 126253787 + 16.8990922923233 NA intron (NM_144941, intron 1 of 16) intron (NM_144941, intron 1 of 16) 3425 NM_144941 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding common_peak2_108_509_0.697388798670778_9.34304783619425_16.8960837377008 chr14 25482774 25485559 + 16.8960837377008 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 24981 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_708_7140_0.20347285103384_12.903646828414_16.8929048623635 chr15 79738672 79743137 + 16.8929048623635 NA intron (NM_001205345, intron 1 of 17) intron (NM_001205345, intron 1 of 17) 1632 NM_194342 223697 Mm.202715 NM_194342 ENSMUSG00000042524 Sun2 B230369L08Rik|C030011B15|Unc84b Sad1 and UNC84 domain containing 2 protein-coding unique_peak2_14_219_-1.59931559211331_6.981701917468_16.8898260453875 chr11 86428118 86429088 + 16.8898260453875 NA intron (NR_030571, intron 1 of 2) intron (NR_030571, intron 1 of 2) 12759 NR_030571 100124487 NR_030571 ENSMUSG00000077049 Mir467c Mirn467c|mir-467c microRNA 467c ncRNA common_peak2_199_1263_0.462071377518351_10.5348164369363_16.8876445271978 chr2 181597830 181599635 + 16.8876445271978 NA intron (NM_172676, intron 1 of 4) intron (NM_172676, intron 1 of 4) 415 NM_172676 229011 Mm.205422 NM_172676 ENSMUSG00000038605 Samd10 D930033N23Rik|E130318E08 sterile alpha motif domain containing 10 protein-coding common_peak1_70_253_0.944474859074852_8.46092211630959_16.8871130302321 chr10 59969860 59970792 + 16.8871130302321 NA Intergenic Intergenic -18556 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak1_79_899_-0.669422341213549_9.47907002061026_16.8819163930929 chr7 25658359 25659112 + 16.8819163930929 NA promoter-TSS (NM_007533) promoter-TSS (NM_007533) 26 NM_007533 12039 Mm.25848 NM_007533 ENSMUSG00000060376 Bckdha - branched chain ketoacid dehydrogenase E1, alpha polypeptide protein-coding common_peak2_72_823_-0.70418150079759_9.33440977678442_16.87942046084 chr2 30048404 30049670 + 16.87942046084 NA promoter-TSS (NM_001008498) promoter-TSS (NM_001008498) -158 NM_001008498 71820 Mm.88053 NM_001008498 ENSMUSG00000039715 Wdr34 3200002I06Rik WD repeat domain 34 protein-coding common_peak2_172_1023_0.509210531492549_10.2546052657463_16.878591009736 chr1 85894283 85897391 + 16.878591009736 NA intron (NM_022417, intron 1 of 5) intron (NM_022417, intron 1 of 5) 1327 NM_022417 64294 Mm.29870 NM_022417 ENSMUSG00000026223 Itm2c 3110038L02Rik|BRI3|Bricd2c|E25|E25C|ITM3 integral membrane protein 2C protein-coding unique_peak2_30_381_-1.11074662330144_8.02205551638503_16.8775684474474 chr12 89718734 89720454 + 16.8775684474474 NA intron (NM_172544, intron 14 of 19) intron (NM_172544, intron 14 of 19) -92889 NM_001252074 18191 Mm.425766 NM_172544 ENSMUSG00000066392 Nrxn3 - neurexin III protein-coding unique_peak2_6_137_-2.27518432913295_5.97093229221169_16.8743263007331 chr6 97317806 97318890 + 16.8743263007331 NA intron (NM_145148, intron 12 of 23) intron (NM_145148, intron 12 of 23) -65568 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_282_2065_0.367517550577704_11.1963833141539_16.8727030320971 chr15 74987858 74990126 + 16.8727030320971 NA Intergenic Intergenic -5562 NM_020498 57248 Mm.358339 NM_020498 ENSMUSG00000022586 Ly6i AI789751|Ly-6I|Ly-6M lymphocyte antigen 6 complex, locus I protein-coding common_peak1_43_515_-0.924817201542947_8.54881865465178_16.862987070149 chr12 72084787 72085454 + 16.862987070149 NA promoter-TSS (NM_001205067) promoter-TSS (NM_001205067) 193 NM_026038 67217 Mm.286120 NM_026038 ENSMUSG00000019718 L3hypdh 2810055F11Rik L-3-hydroxyproline dehydratase (trans-) protein-coding common_peak1_58_673_-0.791078376140034_9.00106559311184_16.8603901612823 chr3 96499568 96500351 + 16.8603901612823 NA Intergenic Intergenic -25226 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding common_peak1_162_938_0.528863096267596_10.1394128957876_16.8603199671109 chr11 51649881 51651481 + 16.8603199671109 NA promoter-TSS (NR_027958) promoter-TSS (NR_027958) -273 NR_027958 97775 Mm.220299 NM_175289 ENSMUSG00000052563 D930048N14Rik AI315703|R75254 RIKEN cDNA D930048N14 gene ncRNA common_peak1_15_229_-1.54923678781921_7.07087165703477_16.8595136458126 chr12 84451325 84451724 + 16.8595136458126 NA promoter-TSS (NM_134042) promoter-TSS (NM_134042) 16 NM_173756 217708 Mm.311904 NM_173756 ENSMUSG00000085793 Lin52 5830457H20Rik lin-52 homolog (C. elegans) protein-coding common_peak1_147_1670_-0.473487744477064_10.4697521458227_16.8580105697132 chr7 100492491 100494610 + 16.8580105697132 NA intron (NM_011671, intron 1 of 7) intron (NM_011671, intron 1 of 7) 192 NM_011671 22228 Mm.171378 NM_011671 ENSMUSG00000033685 Ucp2 Slc25a8 uncoupling protein 2 (mitochondrial, proton carrier) protein-coding common_peak1_320_2460_0.338075993050897_11.4340669389836_16.8578080956357 chr6 122299542 122302892 + 16.8578080956357 NA Intergenic MTE2a|LTR|ERVL-MaLR -7793 NM_010749 17113 Mm.249225 NM_010749 ENSMUSG00000007458 M6pr CD-MPR|Mpr46 mannose-6-phosphate receptor, cation dependent protein-coding common_peak1_41_96_1.40417411279773_7.30199989858599_16.8509985310892 chr2 32078088 32078912 + 16.8509985310892 NA intron (NM_175511, intron 1 of 1) intron (NM_175511, intron 1 of 1) 5205 NM_175511 241303 Mm.250441 NM_175511 ENSMUSG00000050592 Fam78a A130092J06Rik family with sequence similarity 78, member A protein-coding unique_peak2_23_309_-1.26234893718214_7.64494993668317_16.849750466569 chr4 88762656 88763765 + 16.849750466569 NA Intergenic Intergenic 2436 NM_001085531 545645 Mm.489553 NM_001085531 ENSMUSG00000100505 Gm13283 EG545645|OTTMUSG00000011280 predicted gene 13283 protein-coding common_peak1_763_7878_0.193799308760717_13.0406964739791_16.8464398239847 chr15 78491406 78497114 + 16.8464398239847 NA intron (NM_008368, intron 1 of 9) intron (NM_008368, intron 1 of 9) 806 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding common_peak2_341_2684_0.324539174017039_11.5529759598813_16.8457510222123 chr17 36041640 36044527 + 16.8457510222123 NA promoter-TSS (NM_010397) promoter-TSS (NM_010397) 122 NM_001034909 547347 Mm.484641 NM_001034909 ENSMUSG00000073407 Gm6034 EG547347|H2-gs14-2 predicted gene 6034 protein-coding common_peak2_165_1883_-0.44346506925808_10.6578507149837_16.8444121688682 chr5 31178980 31181201 + 16.8444121688682 NA promoter-TSS (NM_027901) promoter-TSS (NM_027901) 54 NM_027901 71752 Mm.271923 NM_027901 ENSMUSG00000101678 Gtf3c2 1300004C11Rik|2610510G03Rik|AI225816|AU041069|TFIIIC110|mKIAA0011 general transcription factor IIIC, polypeptide 2, beta protein-coding common_peak2_243_1678_0.404357558482653_10.9155652941784_16.8322380085388 chr10 11280042 11282190 + 16.8322380085388 NA promoter-TSS (NM_027968) promoter-TSS (NM_027968) -214 NM_027968 71865 Mm.276229 NM_027968 ENSMUSG00000047648 Fbxo30 1700026A16Rik|MUSA1 F-box protein 30 protein-coding common_peak2_309_2345_0.345412804770474_11.3686937004137_16.8322244299721 chr3 133090425 133092841 + 16.8322244299721 NA promoter-TSS (NM_027927) promoter-TSS (NM_027927) 107 NM_026231 67553 Mm.304899 NM_026231 ENSMUSG00000028018 Gstcd 4933434L15Rik glutathione S-transferase, C-terminal domain containing protein-coding common_peak2_149_829_0.559794493241737_9.97686477285515_16.8309084652812 chr16 97850712 97852419 + 16.8309084652812 NA promoter-TSS (NM_144789) promoter-TSS (NM_144789) -338 NM_144789 114604 Mm.328741 NM_144789 ENSMUSG00000014039 Prdm15 C21orf83|E130018M06Rik|ORF62|Zfp298 PR domain containing 15 protein-coding common_peak1_35_431_-1.02358982910444_8.24309258761125_16.8265675734994 chr10 81432327 81432875 + 16.8265675734994 NA Intergenic Intergenic -5428 NM_026756 18029 Mm.426936 NM_008688 ENSMUSG00000055053 Nfic 1110019L22Rik|1500041O16Rik|AA589446|AI746521|NF1-C nuclear factor I/C protein-coding unique_peak2_35_431_-1.02358982910444_8.24309258761125_16.8265675734994 chr11 121026644 121028367 + 16.8265675734994 NA Intergenic Intergenic 11973 NM_009854 12516 Mm.4100 NM_009854 ENSMUSG00000025163 Cd7 - CD7 antigen protein-coding common_peak2_149_1693_-0.469456139856174_10.4914900894041_16.8228770980854 chr2 157132575 157136333 + 16.8228770980854 NA intron (NM_001139520, intron 1 of 16) intron (NM_001139520, intron 1 of 16) 768 NM_001139520 56045 Mm.248478 NM_018851 ENSMUSG00000027639 Samhd1 E330031J07Rik|Mg11 SAM domain and HD domain, 1 protein-coding common_peak1_34_421_-1.03965347418365_8.20127245161536_16.8225785548332 chr7 27486112 27486839 + 16.8225785548332 NA promoter-TSS (NM_018820) promoter-TSS (NM_018820) -478 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding common_peak1_319_2450_0.33842870350936_11.4283691206215_16.8215393999313 chr10 62650311 62652342 + 16.8215393999313 NA promoter-TSS (NM_053183) promoter-TSS (NM_053183) -128 NM_053183 94213 Mm.114116 NM_053183 ENSMUSG00000020076 Ddx50 4933429B04Rik|8430408E17Rik|GU2|RH-II DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein-coding common_peak1_20_17_2.60754964235619_5.47369982262041_16.8195939144185 chr17 35162882 35163341 + 16.8195939144185 NA intron (NM_020027, intron 1 of 30) intron (NM_020027, intron 1 of 30) 1766 NM_001199044 53761 Mm.272462 NM_020027 ENSMUSG00000024393 Prrc2a 3110039B05Rik|Bat-2|Bat2|D17H6S51E|G2|Wbp12|mKIAA4178 proline-rich coiled-coil 2A protein-coding common_peak1_97_431_0.748601045933572_9.12918802513025_16.815728739259 chr15 76671015 76672622 + 16.815728739259 NA intron (NM_033371, intron 1 of 10) CpG 138 NM_033371 73062 Mm.322901 NM_033371 ENSMUSG00000033819 Ppp1r16a 2900084E10Rik|Mypt3|R75527 protein phosphatase 1, regulatory (inhibitor) subunit 16A protein-coding common_peak1_49_577_-0.862298179177937_8.74377659291171_16.811527853093 chr10 75299170 75299995 + 16.811527853093 NA intron (NM_153406, intron 13 of 15) ORR1E|LTR|ERVL-MaLR -17295 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_75_854_-0.686191784003658_9.39668471777143_16.8098500933011 chr4 40833029 40834532 + 16.8098500933011 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) 16358 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA unique_peak1_37_78_1.52319576640614_7.06537863138017_16.8049762651049 chr5 34535063 34535841 + 16.8049762651049 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) -7913 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding unique_peak1_37_78_1.52319576640614_7.06537863138017_16.8049762651049-2 chr7 132790452 132791460 + 16.8049762651049 NA intron (NM_212473, intron 1 of 4) intron (NM_212473, intron 1 of 4) -4021 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_89_1008_-0.62591951035537_9.66575070392867_16.8001922369248 chrX 7841780 7842775 + 16.8001922369248 NA exon (NM_138604, exon 1 of 9) exon (NM_138604, exon 1 of 9) 195 NM_001290537 54644 Mm.142827 NM_138604 ENSMUSG00000031154 Otud5 AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7 OTU domain containing 5 protein-coding common_peak2_537_4955_0.242010960614762_12.395965952448_16.7998558632488 chr12 98267704 98272968 + 16.7998558632488 NA intron (NM_008152, intron 1 of 1) L1MEd|LINE|L1 1701 NM_008152 14744 Mm.378924 NM_008152 ENSMUSG00000021886 Gpr65 Dig1|Gpcr25|TDAG8 G-protein coupled receptor 65 protein-coding common_peak2_308_3679_-0.309807651014353_11.6905862254372_16.7981676239712 chr16 91646055 91649048 + 16.7981676239712 NA promoter-TSS (NM_178880) promoter-TSS (NM_178880) -273 NM_019973 20658 Mm.46401 NM_019973 ENSMUSG00000022961 Son 2900011L12Rik|AA409051|AU067731|C81487|mKIAA1019|nrebp Son DNA binding protein protein-coding common_peak1_56_650_-0.802015013615462_8.9455062263579_16.7930183548741 chr2 91963796 91964724 + 16.7930183548741 NA promoter-TSS (NM_138306) promoter-TSS (NM_138306) -697 NM_138306 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak2_283_2077_0.365404229315516_11.203682053562_16.7885930307125 chr5 142793027 142795789 + 16.7885930307125 NA intron (NM_001122730, intron 2 of 27) intron (NM_001122730, intron 2 of 27) 22979 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak2_240_1650_0.406727090341391_10.892487950084_16.7883309561187 chr11 113683009 113685215 + 16.7883309561187 NA promoter-TSS (NM_177777) promoter-TSS (NM_177777) 39 NM_138598 28081 Mm.351688 NM_138598 ENSMUSG00000041629 Fam104a D11Wsu99e family with sequence similarity 104, member A protein-coding common_peak2_216_1421_0.43651256438036_10.6919620318096_16.7880720475152 chr17 28485003 28486986 + 16.7880720475152 NA 5' UTR (NM_010220, exon 1 of 11) 5' UTR (NM_010220, exon 1 of 11) 155 NM_010220 14229 Mm.276405 NM_010220 ENSMUSG00000024222 Fkbp5 D17Ertd592e|Dit1|FKBP-5|FKBP51 FK506 binding protein 5 protein-coding common_peak1_36_442_-1.01137923734361_8.28547326988321_16.7845309493221 chr14 56283152 56283852 + 16.7845309493221 NA Intergenic Intergenic -21242 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak2_325_2514_0.334114070414836_11.4633997199003_16.7779541338762 chr11 48977494 48981718 + 16.7779541338762 NA promoter-TSS (NM_173434) promoter-TSS (NM_173434) -208 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5|OTTMUSG00000005540 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak1_29_370_-1.1266189440231_7.97196590460925_16.7755518889055 chr6 87009840 87010313 + 16.7755518889055 NA intron (NM_001170591, intron 1 of 7) CpG 240 NM_020045 56748 Mm.23809 NM_020045 ENSMUSG00000029993 Nfu1 0610006G17Rik|CGI-33|Hirip5 NFU1 iron-sulfur cluster scaffold protein-coding common_peak1_13_208_-1.64740669324931_6.88365578545623_16.7719734531463 chr10 81169628 81169950 + 16.7719734531463 NA Intergenic ID_B1|SINE|B4 -2069 NM_021501 59004 Mm.34428 NM_021501 ENSMUSG00000004934 Pias4 PIASY|Pias-gamma|Piasg protein inhibitor of activated STAT 4 protein-coding common_peak2_151_847_0.552280682392759_10.0040607957596_16.7682700187771 chr7 81762220 81763930 + 16.7682700187771 NA intron (NM_025997, intron 1 of 2) CpG 122 NM_025997 67148 Mm.241472 NM_025997 ENSMUSG00000038646 Fam103a1 2410047I02Rik|2610204K14Rik|RAM family with sequence similarity 103, member A1 protein-coding common_peak1_53_618_-0.824975721188313_8.86130773862011_16.766586978113 chr19 46395298 46395846 + 16.766586978113 NA intron (NM_016860, intron 1 of 10) CpG 163 NM_016860 54130 Mm.3118 NM_016860 ENSMUSG00000025228 Actr1a Arp1|alpha-Arp1 ARP1 actin-related protein 1A, centractin alpha protein-coding common_peak1_180_1095_0.491175232515834_10.3436196992184_16.7663353185542 chr5 44225917 44227774 + 16.7663353185542 NA promoter-TSS (NM_173764) promoter-TSS (NM_173764) -239 NM_173764 231225 Mm.30688 NM_173764 ENSMUSG00000046985 Tapt1 4932414K18Rik transmembrane anterior posterior transformation 1 protein-coding common_peak2_36_74_1.55096496071553_7.00430117085365_16.7658706206778 chr4 3953687 3954297 + 16.7658706206778 NA Intergenic Intergenic 14568 NR_104356 66433 Mm.27406 NM_181391 ENSMUSG00000042198 Chchd7 1810049H20Rik coiled-coil-helix-coiled-coil-helix domain containing 7 protein-coding common_peak2_383_3147_0.300004887330033_11.7702222691725_16.762525440072 chr19 40682653 40689248 + 16.762525440072 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 26180 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak2_122_615_0.638791240523808_9.58618216095681_16.7590417410442 chr7 68128689 68130145 + 16.7590417410442 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 134816 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding common_peak1_58_672_-0.788936289568491_8.99999454982607_16.7579968396493 chr17 23725850 23726827 + 16.7579968396493 NA promoter-TSS (NM_023058) promoter-TSS (NM_023058) 2 NM_023058 268930 Mm.182193 NM_023058 ENSMUSG00000023908 Pkmyt1 6230424P17|AW209059|Myt1 protein kinase, membrane associated tyrosine/threonine 1 protein-coding common_peak1_76_291_0.886896981893049_8.63327304982654_16.7539957271383 chr8 22652782 22653930 + 16.7539957271383 NA promoter-TSS (NM_011130) promoter-TSS (NM_011130) 81 NM_011130 18970 Mm.123211 NM_011130 ENSMUSG00000031536 Polb A430088C08Rik polymerase (DNA directed), beta protein-coding common_peak1_18_258_-1.41644408428966_7.30858624554172_16.750355484158 chr14 79530246 79530662 + 16.750355484158 NA intron (NM_001286411, intron 1 of 8) MIR3|SINE|MIR 14780 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak1_24_319_-1.23591290275098_7.70397164351187_16.7450119773797 chr17 47597838 47598256 + 16.7450119773797 NA exon (NM_001081636, exon 6 of 7) exon (NM_001081636, exon 6 of 7) 4580 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak2_148_1680_-0.470179007128547_10.4800145056719_16.742533658549 chr5 105641301 105644363 + 16.742533658549 NA Intergenic Intergenic -57137 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak1_12_1_4.92880893345458_3.46440446672729_16.7417249135959 chr19 37353488 37353899 + 16.7417249135959 NA Intergenic Intergenic -22710 NM_010615 16551 Mm.42203 NM_010615 ENSMUSG00000012443 Kif11 Eg5|Kif8|Kifl1|Knsl1 kinesin family member 11 protein-coding unique_peak1_12_1_4.92880893345458_3.46440446672729_16.7417249135959-2 chr4 41083519 41083922 + 16.7417249135959 NA Intergenic RMER13A1|LTR|ERVK 14463 NM_016689 11828 Mm.34043 NM_016689 ENSMUSG00000028435 Aqp3 AQP-2 aquaporin 3 protein-coding common_peak2_280_2047_0.367591487201061_11.1837957436005_16.7401849635747 chr1 144305749 144309689 + 16.7401849635747 NA Intergenic Intergenic -58615 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak1_169_1929_-0.436130973116596_10.6963196455971_16.7385562446597 chr13 51650681 51652449 + 16.7385562446597 NA promoter-TSS (NM_029279) promoter-TSS (NM_029279) -143 NM_001308448 75420 Mm.275981 NM_029279 ENSMUSG00000035139 Secisbp2 2210413N07Rik|2810012K13Rik|SBP2 SECIS binding protein 2 protein-coding common_peak1_50_587_-0.852001567708907_8.77367156098191_16.7310992025619 chr11 95258802 95259476 + 16.7310992025619 NA Intergenic CpG -2390 NM_053093 93670 Mm.40085 NM_053093 ENSMUSG00000020872 Tac4 AW489379|PPT-C tachykinin 4 protein-coding common_peak1_147_1668_-0.471759965778475_10.4688882564734_16.7274068105861 chr18 34758628 34760039 + 16.7274068105861 NA intron (NM_175104, intron 1 of 4) intron (NM_175104, intron 1 of 4) 427 NM_175104 66306 Mm.29424 NM_175104 ENSMUSG00000034300 Fam53c 2810012G03Rik|Gm21179 family with sequence similarity 53, member C protein-coding common_peak2_258_1827_0.387269405418811_11.0296850577675_16.7261091604113 chr11 50324385 50326913 + 16.7261091604113 NA promoter-TSS (NM_007597) promoter-TSS (NM_007597) 24 NM_001110499 12330 Mm.248827 NM_007597 ENSMUSG00000020368 Canx 1110069N15Rik|AI988026|Cnx|D11Ertd153e calnexin protein-coding common_peak2_106_1196_-0.56623701758773_9.94208892814964_16.7169864172109 chr3 95133349 95136786 + 16.7169864172109 NA intron (NM_153121, intron 1 of 2) intron (NM_153121, intron 1 of 2) 979 NM_153121 217779 Mm.341945 NM_153121 ENSMUSG00000053769 Lysmd1 2610022K04Rik|AI415311 LysM, putative peptidoglycan-binding, domain containing 1 protein-coding common_peak1_94_411_0.761969263091993_9.06748515872922_16.7143533667889 chr15 85042214 85043564 + 16.7143533667889 NA intron (NM_133750, intron 1 of 8) intron (NM_133750, intron 1 of 8) 5827 NM_133750 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding unique_peak2_14_218_-1.59274293818983_6.97841559050626_16.7139833335806 chr4 88796471 88797480 + 16.7139833335806 NA promoter-TSS (NM_001161609).2 promoter-TSS (NM_001161609).2 233 NM_001098841 545651 Mm.149203 NM_001098841 ENSMUSG00000101163 Gm13278 OTTMUSG00000011272 predicted gene 13278 protein-coding unique_peak2_17_248_-1.45531657019541_7.23234364697037_16.70928438103 chr4 11475592 11477101 + 16.70928438103 NA Intergenic Intergenic -9612 NM_001081183 66185 Mm.331487 NM_001081183 ENSMUSG00000040720 1110037F02Rik 4930422M05Rik|Kiaa1429|mKIAA1429 RIKEN cDNA 1110037F02 gene protein-coding common_peak1_54_628_-0.815625188493373_8.8891036126326_16.70209810355 chr18 37925214 37926015 + 16.70209810355 NA intron (NM_001305981, intron 1 of 28) B1_Mus2|SINE|Alu 9809 NM_001305980 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding unique_peak2_9_166_-1.91918237602963_6.42411310445924_16.7011375710185-2 chr6 136900749 136901710 + 16.7011375710185 NA Intergenic RLTR20A3_MM|LTR|ERVK 20951 NM_026983 69187 Mm.33692 NM_026983 ENSMUSG00000030219 Erp27 1810033M07Rik|1810047B09Rik endoplasmic reticulum protein 27 protein-coding unique_peak2_9_166_-1.91918237602963_6.42411310445924_16.7011375710185 chr17 47268829 47269799 + 16.7011375710185 NA intron (NM_001097623, intron 4 of 19) intron (NM_001097623, intron 4 of 19) 39084 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding unique_peak1_18_12_2.8999244852558_5.15040196076899_16.7008444239072 chr12 102641047 102641409 + 16.7008444239072 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 43792 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_207_1339_0.447240892854865_10.6116377317726_16.6999721736102 chr2 167660533 167662797 + 16.6999721736102 NA promoter-TSS (NM_145538) promoter-TSS (NM_145538) -121 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding common_peak1_192_2207_-0.405719164331909_10.9056648746122_16.6992735308866 chr4 40702459 40704061 + 16.6992735308866 NA promoter-TSS (NM_001025445) promoter-TSS (NM_001025445) -66 NM_001025445 66408 Mm.430710 NM_025545 ENSMUSG00000028411 Aptx 2410016G21Rik|AA388047|FHA-HIT aprataxin protein-coding common_peak2_55_167_1.12085963842552_7.95274724199152_16.6945455161959 chr14 14294231 14295165 + 16.6945455161959 NA Intergenic MuRRS-int|LTR|ERV1 -33415 NM_147027 18330 Mm.484338 NM_147027 ENSMUSG00000072707 Olfr31 MOR274-1|MTPCR53 olfactory receptor 31 protein-coding common_peak1_167_1905_-0.439020826552374_10.6768219906338_16.6937959726098 chr11 102555359 102556852 + 16.6937959726098 NA promoter-TSS (NM_001159492) promoter-TSS (NM_001159492) 53 NM_001159492 237943 Mm.260282 NM_001159492 ENSMUSG00000034621 Gpatch8 5430405G24Rik|AU018890|ENSMUSG00000075516|Fbm1|Gpatc8|mKIAA0553 G patch domain containing 8 protein-coding common_peak1_356_2850_0.313954562454974_11.6342296051654_16.6901843327517 chr2 167776457 167779300 + 16.6901843327517 NA Intergenic Intergenic 86701 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_78_304_0.869433658663068_8.68738226178178_16.6850559895833 chr7 114085850 114087238 + 16.6850559895833 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 31237 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak2_12_197_-1.70054768662503_6.77908277676709_16.6838512279484 chr2 72274351 72275586 + 16.6838512279484 NA Intergenic IAPEz-int|LTR|ERVK -10669 NM_023057 65964 Mm.304143 NM_023057 ENSMUSG00000004085 Map3k20 AV006891|B230120H23Rik|MLTK|MLTKalpha|MLTKbeta|Zak mitogen-activated protein kinase kinase kinase 20 protein-coding common_peak2_98_439_0.740094750289504_9.15140708866941_16.683017744139 chr11 63968686 63971060 + 16.683017744139 NA intron (NM_178379, intron 6 of 6) intron (NM_178379, intron 6 of 6) 5647 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak1_42_101_1.37330182828246_7.35907625611272_16.6799783320861 chr17 56161676 56162380 + 16.6799783320861 NA promoter-TSS (NM_025566) promoter-TSS (NM_025566) -463 NM_025566 66443 Mm.2312 NM_025566 ENSMUSG00000044469 Tnfaip8l1 2600017J23Rik|TIPE1 tumor necrosis factor, alpha-induced protein 8-like 1 protein-coding common_peak2_42_101_1.37330182828246_7.35907625611272_16.6799783320861 chr16 87708739 87709750 + 16.6799783320861 NA intron (NM_007520, intron 1 of 4) intron (NM_007520, intron 1 of 4) 10290 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak2_37_451_-0.993202447831941_8.32357773849922_16.6771245837738 chr11 119924657 119926237 + 16.6771245837738 NA intron (NR_039557, intron 2 of 2) intron (NR_039557, intron 2 of 2) 11637 NM_001085498 208092 Mm.306673 NM_001085498 ENSMUSG00000025371 Chmp6 2400004G01Rik charged multivesicular body protein 6 protein-coding common_peak1_253_1778_0.39197221009324_10.9928369003138_16.6760515317321 chr13 73772189 73774987 + 16.6760515317321 NA intron (NM_011390, intron 1 of 23) intron (NM_011390, intron 1 of 23) 9891 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak2_297_2223_0.35259624057047_11.2952391930087_16.6690729962712 chr15 64101129 64104439 + 16.6690729962712 NA intron (NM_001276467, intron 25 of 29) intron (NM_001276467, intron 25 of 29) -42336 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_60_692_-0.772192091090242_9.05061549659209_16.66558278588 chr8 70341404 70342148 + 16.66558278588 NA intron (NM_001122829, intron 4 of 23) intron (NM_001122829, intron 4 of 23) 11497 NM_030680 19704 Mm.258280 NM_030680 ENSMUSG00000058301 Upf1 B430202H16Rik|NORF1|PNORF-1|Rent1|Upflp UPF1 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak2_564_5293_0.23348260555532_12.4868837822731_16.661217792695 chr19 5387565 5391843 + 16.661217792695 NA non-coding (NR_033224, exon 1 of 1) non-coding (NR_033224, exon 1 of 1) -1001 NM_016882 20227 Mm.34562 NM_016882 ENSMUSG00000039148 Sart1 U5-110K squamous cell carcinoma antigen recognized by T cells 1 protein-coding unique_peak2_36_441_-1.00811890818002_8.28384310530142_16.6591001457497 chr10 67609611 67611707 + 16.6591001457497 NA Intergenic Intergenic -61704 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_25_329_-1.21090096960488_7.76087172944337_16.6570683768191 chr9 22002930 22003575 + 16.6570683768191 NA promoter-TSS (NM_029939) promoter-TSS (NM_029939) 264 NM_008925 19089 Mm.214593 NM_008925 ENSMUSG00000003402 Prkcsh 80K-H|PKCSH protein kinase C substrate 80K-H protein-coding common_peak1_407_5006_-0.26222302939723_12.1586192253851_16.6564206222115 chr10 80158134 80161747 + 16.6564206222115 NA intron (NR_038088, intron 1 of 4) CpG -7901 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak1_126_1424_-0.514535509765421_10.2194784490568_16.6564202723811 chr17 7875100 7876557 + 16.6564202723811 NA Intergenic Intergenic -50172 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding common_peak2_26_338_-1.18293389629675_7.81367451498797_16.654632459772 chr19 4961881 4962717 + 16.654632459772 NA promoter-TSS (NM_025553) promoter-TSS (NM_025553) -7 NM_025553 66419 Mm.28494 NM_025553 ENSMUSG00000024902 Mrpl11 2410001P07Rik|L11mt mitochondrial ribosomal protein L11 protein-coding unique_peak1_14_4_3.86011602652399_4.25198610814935_16.6513625776145 chr14 48496828 48497230 + 16.6513625776145 NA intron (NR_132324, intron 10 of 13) AT_rich|Low_complexity|Low_complexity 50677 NR_132324 218989 Mm.85211 NM_172600 ENSMUSG00000036339 Tmem260 5930435P15|6720456H20Rik transmembrane protein 260 protein-coding unique_peak1_14_4_3.86011602652399_4.25198610814935_16.6513625776145-2 chr19 37347632 37348027 + 16.6513625776145 NA Intergenic Intergenic -17216 NM_031156 15925 Mm.28366 NM_031156 ENSMUSG00000056999 Ide 1300012G03Rik|4833415K22Rik|AA675336|AI507533 insulin degrading enzyme protein-coding common_peak1_228_1537_0.418628106796346_10.79615384136_16.6372721717286 chr13 35741323 35743129 + 16.6372721717286 NA intron (NM_001123386, intron 1 of 6) CpG 824 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding common_peak2_108_1218_-0.559740175090576_9.97161232307493_16.6350009318611 chr5 137501365 137503402 + 16.6350009318611 NA promoter-TSS (NM_028753) promoter-TSS (NM_028753) 46 NM_028753 74097 Mm.290242 NM_028753 ENSMUSG00000029715 Pop7 0610037N12Rik|AI852017|Rpp20 processing of precursor 7, ribonuclease P family, (S. cerevisiae) protein-coding common_peak1_212_2451_-0.382449201690481_11.0685186628455_16.6343949875154 chr2 174612175 174614926 + 16.6343949875154 NA Intergenic Intergenic -29984 NM_001099328 100043757 Mm.48711 NM_001099328 ENSMUSG00000050600 Zfp831 ENSMUSG00000050600|OTTMUSG00000017459 zinc finger protein 831 protein-coding unique_peak1_27_39_1.96463665513056_6.30424642245264_16.6240869517788 chr13 43768065 43768865 + 16.6240869517788 NA Intergenic MLTR14|LTR|ERV1 -16647 NM_009856 12522 Mm.57175 NM_009856 ENSMUSG00000015396 Cd83 - CD83 antigen protein-coding common_peak1_61_702_-0.764086363151872_9.0753376974966_16.6240579205016 chr18 34783720 34784581 + 16.6240579205016 NA intron (NM_001081256, intron 1 of 23) intron (NM_001081256, intron 1 of 23) 7142 NM_001081256 277250 Mm.277906 NM_029518 ENSMUSG00000038773 Kdm3b 5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082 KDM3B lysine (K)-specific demethylase 3B protein-coding common_peak1_188_1167_0.475919117225049_10.4277841174925_16.6234377049865 chr14 52196516 52197998 + 16.6234377049865 NA promoter-TSS (NM_033618) promoter-TSS (NM_033618) -18 NM_033618 114741 Mm.21662 NM_033618 ENSMUSG00000035726 Supt16 Cdc68|Fact140|Spt16|Supt16h suppressor of Ty 16 protein-coding common_peak2_188_1167_0.475919117225049_10.4277841174925_16.6234377049865 chr19 30029645 30031840 + 16.6234377049865 NA 5' UTR (NM_144873, exon 1 of 16) 5' UTR (NM_144873, exon 1 of 16) 229 NM_144873 109113 Mm.313364 NM_144873 ENSMUSG00000024817 Uhrf2 2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf ubiquitin-like, containing PHD and RING finger domains 2 protein-coding common_peak2_412_5074_-0.260129592652607_12.1791273106336_16.6206029133309 chr4 133812401 133816160 + 16.6206029133309 NA Intergenic CpG 60451 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_152_857_0.546971455781195_10.0183195653901_16.6103654823977 chr11 67454686 67456497 + 16.6103654823977 NA Intergenic CpG -77407 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_59_681_-0.778359185240113_9.02444833640412_16.6089024021732 chr11 106036875 106037489 + 16.6089024021732 NA exon (NM_027946, exon 1 of 7) exon (NM_027946, exon 1 of 7) 310 NM_027946 71833 Mm.307455 NM_027946 ENSMUSG00000049354 Dcaf7 1700012F10Rik|2610037L01Rik|C86529|HAN11|Wdr68 DDB1 and CUL4 associated factor 7 protein-coding common_peak1_40_92_1.42228445395739_7.25030103808673_16.6051328232692 chr1 106619215 106620030 + 16.6051328232692 NA intron (NM_009741, intron 1 of 1) B4A|SINE|B4 -72991 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_49_136_1.21459542036221_7.70532979314163_16.5984065233853 chr5 118513602 118514518 + 16.5984065233853 NA Intergenic Intergenic -46659 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_24_318_-1.23139742162849_7.70171390295063_16.5984065233852 chr19 11107869 11108460 + 16.5984065233852 NA intron (NM_027058, intron 4 of 6) intron (NM_027058, intron 4 of 6) 22714 NM_027058 69369 Mm.391200 NM_027058 ENSMUSG00000024729 1700017D01Rik - RIKEN cDNA 1700017D01 gene protein-coding unique_peak1_31_54_1.74150586078686_6.65211264391809_16.5965956484366 chr1 72211739 72212363 + 16.5965956484366 NA exon (NM_001005423, exon 1 of 5) exon (NM_001005423, exon 1 of 5) 256 NM_001005423 381269 Mm.422636 NM_001005423 ENSMUSG00000039395 Mreg Gm974|Wdt2|dsu melanoregulin protein-coding common_peak1_40_481_-0.951446071164535_8.43716630064769_16.5926581050888-2 chrX 74270897 74271530 + 16.5926581050888 NA intron (NM_052835, intron 2 of 6) intron (NM_052835, intron 2 of 6) 397 NM_052835 110954 Mm.100113 NM_052835 ENSMUSG00000008682 Rpl10 D0HXS648|DXHXS648|DXHXS648E|QM|QM16 ribosomal protein L10 protein-coding common_peak1_40_481_-0.951446071164535_8.43716630064769_16.5926581050888 chr16 38562279 38562828 + 16.5926581050888 NA promoter-TSS (NM_001205287) promoter-TSS (NM_001205287) -261 NM_001205287 67846 Mm.310476 NM_026407 ENSMUSG00000002845 Tmem39a 2610033C09Rik transmembrane protein 39a protein-coding common_peak1_46_544_-0.886981332238271_8.64662175354515_16.5922073718327 chr3 95624686 95625308 + 16.5922073718327 NA promoter-TSS (NM_019561) promoter-TSS (NM_019561) 17 NM_001026212 56205 Mm.241365 NM_019561 ENSMUSG00000038619 Ensa 1700020C18Rik|2610007F17Rik|AI451924 endosulfine alpha protein-coding common_peak1_73_830_-0.692308704372579_9.35255031458406_16.5865868470356 chr11 90256592 90258056 + 16.5865868470356 NA intron (NM_026178, intron 1 of 6) intron (NM_026178, intron 1 of 6) 7848 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak1_56_173_1.10155522370145_7.99372110769945_16.5855948173332 chr8 120492984 120494259 + 16.5855948173332 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) 4755 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_31_389_-1.08446473943809_8.06509794403057_16.5854934732657 chr3 132871636 132872248 + 16.5854934732657 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 6654 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak2_31_389_-1.08446473943809_8.06509794403057_16.5854934732657 chrX 142227393 142228990 + 16.5854934732657 NA promoter-TSS (NM_172782) promoter-TSS (NM_172782) 14 NM_172782 237082 Mm.41899 NM_172782 ENSMUSG00000042271 Nxt2 6330587F24Rik|AI787442|P15-2 nuclear transport factor 2-like export factor 2 protein-coding unique_peak2_41_492_-0.941356881393057_8.47476539568138_16.5852585487693 chr9 107562329 107563973 + 16.5852585487693 NA promoter-TSS (NM_019742) promoter-TSS (NM_019742) -104 NM_019742 80385 Mm.21739 NM_019742 ENSMUSG00000010054 Tusc2 1190001E22Rik|AA407686|Fus1|Lgcc|PAP|Pdap2 tumor suppressor candidate 2 protein-coding common_peak1_114_556_0.665032873631798_9.45404995415593_16.5785966599748 chr1 143777272 143778090 + 16.5785966599748 NA promoter-TSS (NM_013835) promoter-TSS (NM_013835) 403 NM_019562 56207 Mm.261004 NM_019562 ENSMUSG00000018189 Uchl5 5830413B11Rik|Uch37 ubiquitin carboxyl-terminal esterase L5 protein-coding unique_peak1_21_20_2.46748031991519_5.62605758273636_16.577544531218 chr12 25342281 25342783 + 16.577544531218 NA Intergenic MTEb|LTR|ERVL-MaLR 213358 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak1_21_20_2.46748031991519_5.62605758273636_16.577544531218-2 chr9 70261323 70261881 + 16.577544531218 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 54252 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_35_429_-1.01689517653044_8.23974526132424_16.5726411588559 chr19 60895064 60895575 + 16.5726411588559 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 5570 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding unique_peak2_34_419_-1.03279980314259_8.19784561609483_16.5657804674629 chr12 70998862 71000636 + 16.5657804674629 NA intron (NR_045055, intron 3 of 3) intron (NR_045055, intron 3 of 3) 16074 NR_045056 73204 Mm.363770 NR_045055 ENSMUSG00000085622 3110056K07Rik 4921536K06Rik RIKEN cDNA 3110056K07 gene ncRNA common_peak2_106_1194_-0.563824483512338_9.94088266111194_16.5635525791946 chr8 78819800 78821716 + 16.5635525791946 NA intron (NM_001191004, intron 1 of 4) CpG 394 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak1_32_58_1.69467689829904_6.72998149851136_16.5600582601233 chr3 135670732 135671513 + 16.5600582601233 NA intron (NM_008689, intron 1 of 24) intron (NM_008689, intron 1 of 24) 20425 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_380_3118_0.299477372953177_11.7566065238507_16.5558785286286 chr5 140516639 140519620 + 16.5558785286286 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 12520 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_109_519_0.685535516543817_9.36513557130036_16.5552357726002 chr4 25280905 25282238 + 16.5552357726002 NA intron (NM_026194, intron 1 of 18) CpG 250 NM_026194 67490 Mm.226295 NM_026194 ENSMUSG00000040359 Ufl1 1810074P20Rik|AI429228|Kiaa0776|Maxer|Rcad|mKIAA0776 UFM1 specific ligase 1 protein-coding common_peak1_106_497_0.698968487287692_9.30948617571193_16.5509613085301 chr10 78424992 78426554 + 16.5509613085301 NA 5' UTR (NM_007793, exon 1 of 3) 5' UTR (NM_007793, exon 1 of 3) 103 NM_007793 13014 Mm.6095 NM_007793 ENSMUSG00000005054 Cstb AA960480|Stfb cystatin B protein-coding common_peak1_106_497_0.698968487287692_9.30948617571193_16.5509613085301-2 chr7 92636920 92638018 + 16.5509613085301 NA promoter-TSS (NM_028665) promoter-TSS (NM_028665) -327 NM_028665 73845 Mm.73248 NM_028665 ENSMUSG00000041343 Ankrd42 4931426M20|4933417L02Rik|Ikbn ankyrin repeat domain 42 protein-coding common_peak2_47_553_-0.873354386770737_8.67706497266382_16.5397425803382 chr2 180455358 180457186 + 16.5397425803382 NA Intergenic Intergenic -4706 NM_148933 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding common_peak2_104_483_0.706716993402225_9.27222173397571_16.5375228972375 chr2 84670184 84671405 + 16.5375228972375 NA promoter-TSS (NM_001037279) promoter-TSS (NM_001037279) -86 NM_001037279 72657 Mm.259293 NM_001033166 ENSMUSG00000076437 Selenoh 2700094K13Rik|Selh selenoprotein H protein-coding common_peak1_55_637_-0.804235552560588_8.91529483748458_16.5373426009155 chr9 110645406 110646055 + 16.5373426009155 NA intron (NM_183276, intron 1 of 53) intron (NM_183276, intron 1 of 53) 8431 NM_183276 235627 Mm.335481 NM_183276 ENSMUSG00000056724 Nbeal2 1110014F23Rik|BC042396|mKIAA0540 neurobeachin-like 2 protein-coding common_peak1_199_2289_-0.395279757288854_10.9634920043399_16.5324565201392 chr18 31910094 31911795 + 16.5324565201392 NA exon (NM_026006, exon 1 of 1) exon (NM_026006, exon 1 of 1) 959 NM_026006 67158 Mm.31537 NM_026006 ENSMUSG00000044982 Sft2d3 2610206C24Rik|AI847965|AW046173 SFT2 domain containing 3 protein-coding common_peak1_147_1665_-0.469164411781424_10.4675904794748_16.5323196734423 chr16 11202345 11203841 + 16.5323196734423 NA promoter-TSS (NR_038156) promoter-TSS (NR_038156) 199 NM_025546 66409 Mm.28291 NM_025546 ENSMUSG00000005846 Rsl1d1 2410005K20Rik|C76439|pBK1 ribosomal L1 domain containing 1 protein-coding common_peak2_65_225_0.983753296432049_8.31205561063121_16.5295650047211 chr2 31164349 31165896 + 16.5295650047211 NA intron (NM_178760, intron 1 of 17) intron (NM_178760, intron 1 of 17) 12806 NM_178760 277463 Mm.236074 NM_178760 ENSMUSG00000000194 Gpr107 9930033D15Rik|AI790205|C530034M11|mKIAA1624 G protein-coupled receptor 107 protein-coding common_peak1_230_2673_-0.363927693167003_11.2028199035099_16.5245154433852 chr12 86823642 86825953 + 16.5245154433852 NA Intergenic Intergenic 60017 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_16_237_-1.49128150233377_7.14917701214106_16.5190646035178 chr11 96075932 96076591 + 16.5190646035178 NA promoter-TSS (NM_007506) promoter-TSS (NM_007506) -567 NM_007506 11951 Mm.258 NM_007506 ENSMUSG00000006057 Atp5g1 - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) protein-coding common_peak1_16_237_-1.49128150233377_7.14917701214106_16.5190646035178 chr7 16296446 16296881 + 16.5190646035178 NA Intergenic Intergenic -9868 NM_001136471 243846 Mm.482401 NM_172297 ENSMUSG00000041375 Ccdc9 2600011L02Rik coiled-coil domain containing 9 protein-coding common_peak2_460_4036_0.264565982675874_12.1113508628184_16.5156146900911 chr4 117122798 117127403 + 16.5156146900911 NA intron (NR_024078, intron 1 of 6) intron (NR_024078, intron 1 of 6) 625 NR_024078 78611 Mm.446227 NM_001033187 Btbd19 9530048O09Rik|BB115071 BTB (POZ) domain containing 19 ncRNA common_peak1_43_512_-0.916404961726746_8.54461253474368_16.5137153685529 chr6 54807515 54808285 + 16.5137153685529 NA Intergenic Intergenic -9016 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak2_168_993_0.510711806967123_10.2124579450458_16.5136088590091 chr13 108043685 108045372 + 16.5136088590091 NA promoter-TSS (NM_001048250) promoter-TSS (NM_001048250) 54 NM_001048250 75616 Mm.491164 NM_001048250 ENSMUSG00000071180 Smim15 2810008M24Rik small integral membrane protein 15 protein-coding common_peak1_26_337_-1.17867186944259_7.81154350156089_16.5124116139544 chrX 48147394 48147923 + 16.5124116139544 NA intron (NM_028773, intron 1 of 7) intron (NM_028773, intron 1 of 7) 1222 NM_028773 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding common_peak1_42_501_-0.925816383696821_8.50863536210236_16.5101161392175 chr2 22783539 22784376 + 16.5101161392175 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 9630 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak1_29_368_-1.11882057346269_7.96806671932905_16.5026172605296 chr3 121369640 121370297 + 16.5026172605296 NA Intergenic LTRIS4|LTR|ERV1 -56573 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak1_178_2034_-0.421268493730841_10.7801788322882_16.4999946770779 chr16 17084681 17086504 + 16.4999946770779 NA TTS (NM_001252444) TTS (NM_001252444) 15453 NM_001291047 106369 Mm.237941 NM_023249 ENSMUSG00000022773 Ypel1 0610009L05Rik|1700016N17Rik|1700019O22Rik|4921520K19Rik|4930511F14Rik|AV118478|DGL-1|Dgl1|Ppil2|mdgl-1 yippee-like 1 (Drosophila) protein-coding common_peak2_111_1250_-0.549076701775183_10.0143277232782_16.4920443596004 chr5 105494539 105496776 + 16.4920443596004 NA Intergenic Intergenic -23814 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak1_99_1115_-0.584881497320092_9.83168056316914_16.4871475285392 chr2 6710131 6711999 + 16.4871475285392 NA intron (NM_001310447, intron 1 of 11) intron (NM_001310447, intron 1 of 11) 10597 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_57_179_1.08342252936925_8.0335643610143_16.4856407218332 chr6 50436990 50438127 + 16.4856407218332 NA intron (NM_001163645, intron 1 of 21) RMER15|LTR|ERVL 18612 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_369_2997_0.304716881328227_11.702143108612_16.4853871759889 chr17 15703864 15706391 + 16.4853871759889 NA 5' UTR (NM_007690, exon 1 of 36) 5' UTR (NM_007690, exon 1 of 36) 160 NM_007690 12648 Mm.8137 NM_007690 ENSMUSG00000023852 Chd1 4930525N21Rik|AI851787|AW555109 chromodomain helicase DNA binding protein 1 protein-coding common_peak1_259_3038_-0.339241816816687_11.399760051114_16.4841892386028 chr8 122474500 122476697 + 16.4841892386028 NA promoter-TSS (NM_153775) promoter-TSS (NM_153775) 466 NM_001033142 68718 Mm.34356 NM_001033142 ENSMUSG00000014470 Rnf166 1110031E24Rik|AW555115|Zfp313l ring finger protein 166 protein-coding unique_peak1_28_43_1.88923169587527_6.40404746657493_16.4822848141658 chr5 74433071 74433782 + 16.4822848141658 NA intron (NM_001286437, intron 4 of 7) intron (NM_001286437, intron 4 of 7) 98316 NM_178672 212986 Mm.134147 NM_178672 ENSMUSG00000062110 Scfd2 E430013M20Rik|STXBP1L1 Sec1 family domain containing 2 protein-coding common_peak2_126_649_0.617914786258229_9.65325330104493_16.4821634498915 chr5 135911589 135914951 + 16.4821634498915 NA intron (NM_018871, intron 1 of 1) MTD|LTR|ERVL-MaLR 21371 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak1_129_1456_-0.50525833054526_10.2561559967919_16.4771221162894 chr7 6282927 6284160 + 16.4771221162894 NA Intergenic Intergenic -3037 NM_001024928 384763 Mm.276279 NM_001024928 ENSMUSG00000054893 Zfp667 A830025F02Rik|Mip1|ZNF667 zinc finger protein 667 protein-coding common_peak1_107_1205_-0.560582002687777_9.9557231905562_16.4766343093212 chr6 8648891 8650061 + 16.4766343093212 NA intron (NM_001252266, intron 10 of 11) intron (NM_001252266, intron 10 of 11) 108982 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak1_146_809_0.55923265529198_9.94139442541798_16.4706900511737 chr4 6989116 6991129 + 16.4706900511737 NA intron (NM_145711, intron 1 of 8) intron (NM_145711, intron 1 of 8) 601 NM_145711 252838 Mm.435828 NM_145711 ENSMUSG00000041272 Tox 1700007F02Rik thymocyte selection-associated high mobility group box protein-coding common_peak1_36_75_1.53185613776783_7.0138555823275_16.4699685382432 chr4 98395618 98396284 + 16.4699685382432 NA intron (NM_172696, intron 1 of 43) CpG 125 NM_172696 12695 Mm.90218 NM_007704 ENSMUSG00000061859 Patj Cipp|Inadl PATJ, crumbs cell polarity complex component protein-coding unique_peak1_15_6_3.48889834106756_4.55180409259139_16.4694186556342 chr17 50591882 50592284 + 16.4694186556342 NA intron (NM_013880, intron 1 of 5) intron (NM_013880, intron 1 of 5) 82536 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak1_60_690_-0.768022449341286_9.04853067571761_16.4649801378421 chr5 135186422 135187120 + 16.4649801378421 NA promoter-TSS (NM_011714) promoter-TSS (NM_011714) -552 NM_011714 22385 Mm.40331 NM_011714 ENSMUSG00000002748 Baz1b C87820|WSTF|Wbscr9 bromodomain adjacent to zinc finger domain, 1B protein-coding common_peak1_354_2833_0.31264108980732_11.6249445878217_16.4646455634414 chr9 20643352 20645938 + 16.4646455634414 NA promoter-TSS (NM_001310746) promoter-TSS (NM_001310746) 122 NM_001286529 30843 Mm.24608 NM_013911 ENSMUSG00000066892 Fbxl12 3110048D16Rik|Fbl12 F-box and leucine-rich repeat protein 12 protein-coding unique_peak2_10_176_-1.8344201185754_6.5503954907953_16.4640315205024-2 chr2 163252800 163254167 + 16.4640315205024 NA intron (NM_001098799, intron 2 of 8) intron (NM_001098799, intron 2 of 8) 28029 NM_001098799 269389 Mm.207709 NM_001098799 ENSMUSG00000074607 Tox2 AI851523|AV026525|BI987407|Gcx1|RxHMG1 TOX high mobility group box family member 2 protein-coding unique_peak2_10_176_-1.8344201185754_6.5503954907953_16.4640315205024 chr11 19018460 19019666 + 16.4640315205024 NA promoter-TSS (NM_001193271) promoter-TSS (NM_001193271) -94 NM_010789 17268 Mm.356578 NM_010789 ENSMUSG00000020160 Meis1 C530044H18Rik|Evi8 Meis homeobox 1 protein-coding common_peak1_112_542_0.670711110368039_9.42016394298838_16.4573298233605 chr17 21516075 21517246 + 16.4573298233605 NA Intergenic Intergenic -18879 NM_144515 22710 Mm.296100 NM_144515 ENSMUSG00000051341 Zfp52 KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29 zinc finger protein 52 protein-coding common_peak2_48_563_-0.862675115488109_8.70821379465474_16.4531328452897 chrX 170674587 170676678 + 16.4531328452897 NA intron (NM_001308488, intron 4 of 7) intron (NM_001308488, intron 4 of 7) 2988 NM_001199212 107626 Mm.486144 NM_001199212 ENSMUSG00000093806 Asmt Hiomt acetylserotonin O-methyltransferase protein-coding common_peak2_24_317_-1.22686776314797_7.69944907371037_16.4522101810114 chr19 11964520 11965373 + 16.4522101810114 NA promoter-TSS (NM_001033174) promoter-TSS (NM_001033174) -898 NM_001033174 76303 Mm.291279 NM_001033174 ENSMUSG00000024687 Osbp 1110018F06Rik|AW559088|mKIAA4220 oxysterol binding protein protein-coding common_peak1_24_317_-1.22686776314797_7.69944907371037_16.4522101810114 chr2 164076239 164076892 + 16.4522101810114 NA intron (NM_021420, intron 1 of 10) PB1D7|SINE|Alu 2387 NM_021420 58231 Mm.234472 NM_021420 ENSMUSG00000018209 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 protein-coding common_peak1_68_775_-0.717317521940332_9.24125408121696_16.4494098985858 chr15 99074197 99075197 + 16.4494098985858 NA promoter-TSS (NM_001162506) promoter-TSS (NM_001162506) -276 NM_001162506 78733 Mm.124905 NM_030159 ENSMUSG00000032783 Troap AW476063|E130301L11Rik|tastin trophinin associated protein protein-coding common_peak1_53_615_-0.817966662668951_8.85780320936043_16.4479553440481 chr15 76659799 76660749 + 16.4479553440481 NA promoter-TSS (NM_019396) promoter-TSS (NM_019396) -66 NM_019396 54151 Mm.247752 NM_019396 ENSMUSG00000053929 Cyhr1 1110031M01Rik|AU042374|Chrp cysteine and histidine rich 1 protein-coding common_peak2_52_152_1.15835392275046_7.83656480406788_16.4447552583797 chr2 164486027 164487061 + 16.4447552583797 NA promoter-TSS (NM_026797) promoter-TSS (NM_026797) 89 NM_026797 52840 Mm.256927 NM_026797 ENSMUSG00000017734 Dbndd2 1110017A21Rik|2900022J10Rik|AU041050|AW048677|D2Bwg0891e|Nkip|R74724 dysbindin (dystrobrevin binding protein 1) domain containing 2 protein-coding common_peak2_132_1490_-0.498164229621082_10.2929824274729_16.4445518446163 chr6 129821532 129827120 + 16.4445518446163 NA Intergenic Intergenic -48477 NM_001014997 232415 Mm.290598 NM_001014997 ENSMUSG00000071158 Gm156 Klrh1 predicted gene 156 protein-coding common_peak1_81_325_0.839327422020705_8.76839186524143_16.4411753440525 chr8 57486631 57487943 + 16.4411753440525 NA promoter-TSS (NR_126555) promoter-TSS (NR_126555) 573 NM_021788 60406 Mm.118 NM_021788 ENSMUSG00000031609 Sap30 30kDa sin3 associated polypeptide protein-coding common_peak1_32_398_-1.06292498856147_8.10878244194161_16.4406246417896 chr11 115077586 115078212 + 16.4406246417896 NA Intergenic MLT1J|LTR|ERVL-MaLR -13532 NM_001163753 58222 Mm.143789 NM_021411 ENSMUSG00000020732 Rab37 B230331O03Rik|B230354I04Rik RAB37, member RAS oncogene family protein-coding common_peak2_66_753_-0.72787701311894_9.19448220670919_16.43021069945 chr11 6005262 6009459 + 16.43021069945 NA intron (NM_001174053, intron 3 of 19) intron (NM_001174053, intron 3 of 19) 51602 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding common_peak2_66_753_-0.72787701311894_9.19448220670919_16.43021069945-2 chr16 90993934 90996014 + 16.43021069945 NA intron (NM_001045515, intron 2 of 32) intron (NM_001045515, intron 2 of 32) 16121 NM_001045515 104015 Mm.187079 NM_001045515 ENSMUSG00000022973 Synj1 A930006D20Rik|AA675315|mKIAA0910 synaptojanin 1 protein-coding common_peak2_108_513_0.686117686335757_9.34868339236176_16.4280590788741 chr11 101301197 101302518 + 16.4280590788741 NA intron (NM_019584, intron 1 of 11) intron (NM_019584, intron 1 of 11) 410 NM_019584 56208 Mm.178947 NM_019584 ENSMUSG00000035086 Becn1 4921513J16Rik|5430417M23Rik|Atg6 beclin 1, autophagy related protein-coding unique_peak2_18_256_-1.40526034579699_7.30299437629538_16.4264368068071 chr11 98586538 98587359 + 16.4264368068071 NA intron (NM_025661, intron 1 of 3) intron (NM_025661, intron 1 of 3) 297 NM_025661 66612 Mm.180546 NM_025661 ENSMUSG00000038150 Ormdl3 2810011N17Rik|AI315223 ORM1-like 3 (S. cerevisiae) protein-coding common_peak1_18_256_-1.40526034579699_7.30299437629538_16.4264368068071 chr17 33760662 33761113 + 16.4264368068071 NA promoter-TSS (NM_008997) promoter-TSS (NM_008997) -401 NM_008997 19326 Mm.387587 NM_008997 ENSMUSG00000077450 Rab11b A730055L17Rik RAB11B, member RAS oncogene family protein-coding common_peak2_212_2447_-0.38009378069235_11.0673409523465_16.4202715810983 chr9 103364092 103365871 + 16.4202715810983 NA promoter-TSS (NM_001134427) promoter-TSS (NM_001134427) -2 NM_001134427 321022 Mm.261025 NM_175565 ENSMUSG00000032803 Cdv3 2510010F10Rik|C230084J24Rik|C79446|TPP36 carnitine deficiency-associated gene expressed in ventricle 3 protein-coding common_peak1_104_484_0.703739293602329_9.27371058387565_16.4179503557721 chr2 84670149 84671409 + 16.4179503557721 NA promoter-TSS (NM_001037279) promoter-TSS (NM_001037279) -71 NM_001037279 72657 Mm.259293 NM_001033166 ENSMUSG00000076437 Selenoh 2700094K13Rik|Selh selenoprotein H protein-coding common_peak1_107_506_0.689590252208966_9.33063706310782_16.417415901582 chr6 108686415 108688529 + 16.417415901582 NA Intergenic Intergenic -26538 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_147_817_0.557051240642375_9.95448265326294_16.416824831543 chr17 45751323 45753491 + 16.416824831543 NA Intergenic Intergenic -18563 NM_028164 72240 Mm.482897 NM_028164 ENSMUSG00000094690 1600014C23Rik - RIKEN cDNA 1600014C23 gene protein-coding common_peak2_36_439_-1.00157606231325_8.28057168236803_16.4092230879519 chr17 16950965 16952063 + 16.4092230879519 NA Intergenic Intergenic -112589 NM_001005358 449000 Mm.483718 NM_001005358 ENSMUSG00000096696 Zfp960 - zinc finger protein 960 protein-coding common_peak1_36_439_-1.00157606231325_8.28057168236803_16.4092230879519 chr5 92489446 92490126 + 16.4092230879519 NA intron (NM_007644, intron 1 of 11) intron (NM_007644, intron 1 of 11) 15871 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding common_peak2_64_220_0.989011960941465_8.28240853986216_16.4092230879518 chr11 80141538 80142806 + 16.4092230879518 NA promoter-TSS (NM_183275) promoter-TSS (NM_183275) -19 NM_183275 68550 Mm.18466 NM_183275 ENSMUSG00000046909 Tefm 1110002N22Rik transcription elongation factor, mitochondrial protein-coding common_peak2_100_1125_-0.580142918474772_9.84691965284284_16.4082525523388 chr16 16357764 16359302 + 16.4082525523388 NA promoter-TSS (NR_075074) promoter-TSS (NR_075074) 42 NM_001276341 74006 Mm.218820 NM_152816 ENSMUSG00000022789 Dnm1l 6330417M19Rik|AI450666|Dlp1|Dnmlp1|Drp1|python dynamin 1-like protein-coding common_peak2_82_332_0.830127502097087_8.7944421181198_16.4041387515124 chr1 155557564 155559242 + 16.4041387515124 NA 5' UTR (NM_026683, exon 1 of 4) 5' UTR (NM_026683, exon 1 of 4) 283 NM_026683 72482 Mm.288249 NM_026683 ENSMUSG00000033701 Acbd6 0610010G04Rik|2610100E10Rik acyl-Coenzyme A binding domain containing 6 protein-coding common_peak1_73_828_-0.688832329097984_9.35081212694676_16.4035699503291 chr11 97999465 98000672 + 16.4035699503291 NA Intergenic L2b|LINE|L2 -3895 NM_207231 217151 Mm.277896 NM_207231 ENSMUSG00000038352 Arl5c Arl12|BC065791 ADP-ribosylation factor-like 5C protein-coding common_peak2_901_9805_0.171987943093947_13.3454430178327_16.3995332670532 chr2 165316686 165331093 + 16.3995332670532 NA intron (NM_080287, intron 1 of 20) MIR|SINE|MIR 2590 NM_080287 140579 Mm.35064 NM_080287 ENSMUSG00000017670 Elmo2 1190002F24Rik|CED-12 engulfment and cell motility 2 protein-coding unique_peak1_25_33_2.06795840339059_6.12144204294564_16.3960930707084 chr12 16577997 16578604 + 16.3960930707084 NA intron (NM_172950, intron 3 of 19) B4A|SINE|B4 11470 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding unique_peak1_29_47_1.82369393187655_6.49680946665943_16.3776927669023 chr10 67065713 67066324 + 16.3776927669023 NA intron (NM_178606, intron 1 of 7) intron (NM_178606, intron 1 of 7) 30970 NM_001204915 28193 Mm.41272 NM_178606 ENSMUSG00000019873 Reep3 D10Ucla1 receptor accessory protein 3 protein-coding common_peak1_29_47_1.82369393187655_6.49680946665943_16.3776927669023 chr5 123982364 123983063 + 16.3776927669023 NA intron (NM_145070, intron 1 of 31) RMER17A-int|LTR|ERVK 9085 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding common_peak1_126_1420_-0.510480145068735_10.2174507667084_16.3759637430539 chr1 125466347 125468784 + 16.3759637430539 NA Intergenic Intergenic -31838 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak1_317_2437_0.335006182162539_11.4189855017015_16.3726756069395 chr15 86053322 86056640 + 16.3726756069395 NA Intergenic URR1A|DNA|hAT-Charlie -2714 NM_172611 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_60_197_1.03516283096736_8.14693803556329_16.3621943467079 chr13 113603842 113604776 + 16.3621943467079 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 14255 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak2_65_742_-0.733286141691359_9.17057532969292_16.3616302555276 chr13 67813601 67814909 + 16.3616302555276 NA intron (NM_198322, intron 1 of 3) intron (NM_198322, intron 1 of 3) 439 NM_198322 212569 Mm.358842 NM_198322 ENSMUSG00000030446 Zfp273 6820416H06Rik|Rslcan1 zinc finger protein 273 protein-coding common_peak2_451_3934_0.266596200150264_12.07544602047_16.3568916344335 chr15 97359337 97364007 + 16.3568916344335 NA intron (NM_172293, intron 4 of 5) intron (NM_172293, intron 4 of 5) -114385 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak2_174_1047_0.496128299864404_10.2814871514697_16.354767605813 chr9 72132503 72134080 + 16.354767605813 NA Intergenic CpG -21472 NM_001253865 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding common_peak2_203_2335_-0.388929159379849_10.9953599791901_16.3544797851397 chr10 3972338 3974837 + 16.3544797851397 NA intron (NM_172308, intron 1 of 27) CpG 512 NM_172308 270685 Mm.184752 NM_172308 ENSMUSG00000040675 Mthfd1l 2410004L15Rik|AI647056|Fthfsdc1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein-coding common_peak1_40_479_-0.945447330543092_8.43416693033697_16.3535710515654 chr11 34049955 34050810 + 16.3535710515654 NA intron (NM_010696, intron 1 of 20) intron (NM_010696, intron 1 of 20) 3181 NM_010696 16822 Mm.265350 NM_010696 ENSMUSG00000002699 Lcp2 AI323664|BB161688|SLP-76|SLP76|m1Khoe|twm lymphocyte cytosolic protein 2 protein-coding common_peak1_235_1608_0.406802416691093_10.855349819069_16.3526814939566 chr9 111117581 111119497 + 16.3526814939566 NA intron (NM_001164838, intron 1 of 14) CpG 428 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding unique_peak2_205_1325_0.445295134850509_10.5955126275378_16.3485358812629 chr6 131377300 131377722 + 16.3485358812629 NA intron (NM_139117, intron 5 of 9) B1F|SINE|Alu 10939 NM_139117 56449 Mm.458000 NM_011733 ENSMUSG00000030189 Ybx3 Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR Y box protein 3 protein-coding common_peak1_53_614_-0.815622722200651_8.85663123912628_16.3422552085816 chr16 14159507 14159943 + 16.3422552085816 NA promoter-TSS (NM_001081154) promoter-TSS (NM_001081154) 99 NR_030252 723916 NR_030252 ENSMUSG00000070074 Mir484 Mirn484|mir-484|mmu-mir-484 microRNA 484 ncRNA common_peak1_454_3969_0.265527337568045_12.0876869608143_16.3422274854704 chr17 47736971 47740177 + 16.3422274854704 NA intron (NM_001161723, intron 1 of 8) intron (NM_001161723, intron 1 of 8) 643 NM_001161723 21425 Mm.2305 NM_011549 ENSMUSG00000023990 Tfeb Tcfeb|bHLHe35 transcription factor EB protein-coding common_peak1_309_2354_0.339888758298837_11.3714557236496_16.3393599805259 chr1 74235753 74237889 + 16.3393599805259 NA 5' UTR (NM_029711, exon 1 of 10) 5' UTR (NM_029711, exon 1 of 10) 271 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak1_30_377_-1.09556021948677_8.01446231447769_16.3391951075831 chr2 144268745 144269411 + 16.3391951075831 NA intron (NM_001199188, intron 2 of 13) intron (NM_001199188, intron 2 of 13) 1494 NM_024225 69178 Mm.273379 NM_024225 ENSMUSG00000027423 Snx5 0910001N05Rik|1810032P22Rik|AU019504|D2Ertd52e sorting nexin 5 protein-coding common_peak1_38_458_-0.969406893805947_8.35764689651083_16.3332691908085 chr15 86057980 86058692 + 16.3332691908085 NA promoter-TSS (NM_001205353) promoter-TSS (NM_001205353) -391 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_38_458_-0.969406893805947_8.35764689651083_16.3332691908085-2 chr7 80323804 80324520 + 16.3332691908085 NA 5' UTR (NM_173445, exon 1 of 9) 5' UTR (NM_173445, exon 1 of 9) 292 NM_173445 269955 Mm.474502 NM_173445 ENSMUSG00000038930 Rccd1 5830436H09|E430018M08Rik RCC1 domain containing 1 protein-coding common_peak1_330_2576_0.325915422802451_11.4944345332608_16.3318190661368 chrX 13279976 13281923 + 16.3318190661368 NA promoter-TSS (NM_010028) promoter-TSS (NM_010028) -73 NM_010028 13205 Mm.289662 NM_010028 ENSMUSG00000000787 Ddx3x D1Pas1-rs2|Ddx3|Fin14 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked protein-coding common_peak1_637_6228_0.213872181740355_12.7117209479566_16.3291885666789 chr14 56259554 56264432 + 16.3291885666789 NA intron (NM_013542, intron 1 of 4) intron (NM_013542, intron 1 of 4) 267 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding unique_peak1_41_98_1.37473033490525_7.31672178753223_16.3285812358261 chr9 35108294 35109332 + 16.3285812358261 NA intron (NM_009178, intron 1 of 10) intron (NM_009178, intron 1 of 10) -7915 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA unique_peak2_12_195_-1.68590091066063_6.77175938878489_16.3171469171575 chr7 123209959 123211219 + 16.3171469171575 NA Intergenic Intergenic -4277 NM_146198 233836 Mm.211838 NM_146198 ENSMUSG00000030769 Slc5a11 2010013B02Rik|Kst1|RKST2|SMIT2|Slc5a10 solute carrier family 5 (sodium/glucose cotransporter), member 11 protein-coding common_peak1_208_2396_-0.38326857712439_11.0353799050869_16.3163647661293 chr15 100227154 100228850 + 16.3163647661293 NA 5' UTR (NM_007497, exon 1 of 7) 5' UTR (NM_007497, exon 1 of 7) 143 NM_007497 11908 Mm.676 NM_007497 ENSMUSG00000023027 Atf1 - activating transcription factor 1 protein-coding common_peak1_110_529_0.674069617914133_9.38688335840763_16.3144416926285 chr10 112928104 112929242 + 16.3144416926285 NA exon (NM_001033474, exon 1 of 1) exon (NM_001033474, exon 1 of 1) 353 NM_001033474 382423 Mm.431239 NM_001033474 ENSMUSG00000074748 Atxn7l3b 4921506J03Rik|6230409E21Rik|AI315132|ENSMUSG00000074747 ataxin 7-like 3B protein-coding common_peak1_27_346_-1.15222710256034_7.86267830129809_16.3125893377798 chr7 135646310 135646934 + 16.3125893377798 NA intron (NM_001316679, intron 2 of 19) intron (NM_001316679, intron 2 of 19) -5277 NM_001316681 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_119_1339_-0.526136230374719_10.1249491701578_16.3117699372225 chr8 85071361 85072446 + 16.3117699372225 NA exon (NM_001039514, exon 1 of 9) exon (NM_001039514, exon 1 of 9) 146 NM_001039514 330817 Mm.193086 NM_201408 ENSMUSG00000060038 Dhps Dhs deoxyhypusine synthase protein-coding common_peak1_59_678_-0.771999020460672_9.0212682540144_16.3064965058254 chr11 48817561 48818522 + 16.3064965058254 NA promoter-TSS (NM_145377) promoter-TSS (NM_145377) -650 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak2_52_603_-0.822662973881966_8.8270732523841_16.3003657420385 chr17 34068298 34070794 + 16.3003657420385 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -22833 NM_008206 15001 Mm.116 NM_008206 ENSMUSG00000024334 H2-Oa H-2Oa histocompatibility 2, O region alpha locus protein-coding common_peak2_44_112_1.30599967514944_7.47317879998991_16.2986374108906 chr7 24506934 24507975 + 16.2986374108906 NA intron (NR_110958, intron 1 of 2) CpG 367 NR_110958 232969 Mm.181332 NM_146183 ENSMUSG00000064264 Zfp428 2410005H09Rik|AV271806|AW047854|Znf428 zinc finger protein 428 protein-coding common_peak2_116_1304_-0.532756125696102_10.0834560286092_16.2977255956915 chr17 47941375 47944452 + 16.2977255956915 NA Intergenic Intergenic -18281 NM_001110825 74123 Mm.240062 NM_028767 ENSMUSG00000023991 Foxp4 1200010K03Rik|2310007G05Rik|mFKHLA forkhead box P4 protein-coding common_peak2_76_294_0.872150396523862_8.64064634251114_16.2943055931275 chr8 22652795 22654022 + 16.2943055931275 NA promoter-TSS (NM_011130) promoter-TSS (NM_011130) 29 NM_011130 18970 Mm.123211 NM_011130 ENSMUSG00000031536 Polb A430088C08Rik polymerase (DNA directed), beta protein-coding common_peak1_130_1464_-0.499597687462737_10.2668861055782_16.2908404010228 chr1 161793639 161795650 + 16.2908404010228 NA Intergenic MTEa|LTR|ERVL-MaLR -6149 NM_010177 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_62_709_-0.750066054440262_9.09664218717191_16.2897839715573 chr3 106462183 106463188 + 16.2897839715573 NA Intergenic Intergenic -19746 NM_001093754 72121 Mm.14816 NM_028110 ENSMUSG00000027901 Dennd2d 2010308M01Rik|AI451421 DENN/MADD domain containing 2D protein-coding common_peak1_180_1101_0.483298806905204_10.3475579120238_16.2874903110667 chr11 3451503 3453084 + 16.2874903110667 NA promoter-TSS (NR_028317) promoter-TSS (NR_028317) -144 NR_028317 71523 Mm.72795 NM_027820 ENSMUSG00000034587 8430429K09Rik - RIKEN cDNA 8430429K09 gene ncRNA unique_peak2_22_296_-1.27585831670726_7.57638996244714_16.2855977364861 chr1 172276663 172278013 + 16.2855977364861 NA intron (NM_178405, intron 20 of 22) intron (NM_178405, intron 20 of 22) -18914 NM_013734 27222 Mm.482392 NM_013734 ENSMUSG00000007107 Atp1a4 - ATPase, Na+/K+ transporting, alpha 4 polypeptide protein-coding common_peak1_43_510_-0.910769427057314_8.54179476740896_16.2823374193455 chr4 150923715 150924254 + 16.2823374193455 NA intron (NM_011612, intron 1 of 7) ID_B1|SINE|B4 3829 NM_001077508 21942 Mm.244187 NM_011612 ENSMUSG00000028965 Tnfrsf9 4-1BB|A930040I11Rik|AA408498|AI325004|CDw137|Cd137|ILA|Ly63 tumor necrosis factor receptor superfamily, member 9 protein-coding common_peak2_266_1914_0.374024208105153_11.0901407808649_16.2821846867255 chr6 31076987 31083522 + 16.2821846867255 NA Intergenic Intergenic -17161 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_330_2577_0.325355696300418_11.4947143965119_16.2799647760334 chr19 60945426 60951800 + 16.2799647760334 NA intron (NM_018869, intron 1 of 15) (TTTA)n|Simple_repeat|Simple_repeat 58864 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak1_42_499_-0.920057114408136_8.50575572745802_16.2763031874151 chr13 24721748 24722611 + 16.2763031874151 NA intron (NM_001286100, intron 20 of 22) B2_Mm2|SINE|B2 39758 NM_020567 57441 Mm.12239 NM_020567 ENSMUSG00000006715 Gmnn AW546347|Gem geminin protein-coding common_peak2_134_1510_-0.490974791446913_10.3158005494414_16.2723431637875 chr15 57891385 57893272 + 16.2723431637875 NA promoter-TSS (NM_024207) promoter-TSS (NM_024207) 90 NM_024207 67819 Mm.289387 NM_024207 ENSMUSG00000022365 Derl1 1110021N07Rik|AI195141|AW551338|Derlin-1 Der1-like domain family, member 1 protein-coding unique_peak2_10_175_-1.8262461871297_6.54630852507245_16.2718711819057 chr7 123365440 123366558 + 16.2718711819057 NA intron (NM_001316713, intron 1 of 19) intron (NM_001316713, intron 1 of 19) 3916 NM_001122643 70497 Mm.403318 NM_144529 ENSMUSG00000030766 Arhgap17 5730403H17Rik|Nadrin|Nadrin2|Rich1|Wbp15 Rho GTPase activating protein 17 protein-coding common_peak2_156_894_0.531731762254031_10.0716097532786_16.2698248433665 chr10 59614404 59617190 + 16.2698248433665 NA intron (NM_001033259, intron 1 of 7) intron (NM_001033259, intron 1 of 7) 895 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak2_84_947_-0.637101401045767_9.57019254837537_16.2659929485873 chr4 10873871 10875553 + 16.2659929485873 NA exon (NM_026005, exon 1 of 6) exon (NM_026005, exon 1 of 6) 214 NM_026005 67157 Mm.440552 NM_026005 ENSMUSG00000059482 2610301B20Rik AI428449 RIKEN cDNA 2610301B20 gene protein-coding common_peak1_79_892_-0.658157515117734_9.47343760756236_16.2638438641208-2 chr15 80797487 80798545 + 16.2638438641208 NA promoter-TSS (NM_177124) promoter-TSS (NM_177124) -594 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak1_79_892_-0.658157515117734_9.47343760756236_16.2638438641208 chr13 14613174 14613852 + 16.2638438641208 NA promoter-TSS (NM_029271) promoter-TSS (NM_029271) 271 NM_008944 19166 Mm.252255 NM_008944 ENSMUSG00000015671 Psma2 Lmpc3 proteasome (prosome, macropain) subunit, alpha type 2 protein-coding common_peak2_292_2178_0.352143182076942_11.2655220721544_16.2623981731895 chr12 101974735 101977032 + 16.2623981731895 NA promoter-TSS (NM_016856) promoter-TSS (NM_016856) -91 NM_016856 51786 Mm.716 NM_016856 ENSMUSG00000041781 Cpsf2 100kDa|2610024B04Rik|AI662483|Cpsf|MCPSF|mKIAA1367 cleavage and polyadenylation specific factor 2 protein-coding common_peak1_116_574_0.649659819929408_9.49224805579644_16.2615630441228 chr7 68128912 68130082 + 16.2615630441228 NA intron (NM_010513, intron 2 of 20) intron (NM_010513, intron 2 of 20) 134736 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding common_peak2_35_71_1.56137267161671_6.95061133725067_16.2595027911461 chr12 24830982 24831515 + 16.2595027911461 NA promoter-TSS (NM_026037) promoter-TSS (NM_026037) -351 NM_026037 67216 Mm.167671 NM_026037 ENSMUSG00000020646 Mboat2 2810049G06Rik|AU022889|AW547221|LPCAT4|Moact2|Oact2 membrane bound O-acyltransferase domain containing 2 protein-coding common_peak2_446_3878_0.267590457729495_12.0552642893962_16.2584706373698 chr8 106007339 106012389 + 16.2584706373698 NA exon (NM_028038, exon 1 of 1) exon (NM_028038, exon 1 of 1) -1614 NM_025518 66369 Mm.287500 NM_025518 ENSMUSG00000031901 Dus2 2310016K04Rik|Dus2l dihydrouridine synthase 2 protein-coding unique_peak1_20_18_2.52954713035491_5.51270107862104_16.2580937849907 chr2 166044629 166045033 + 16.2580937849907 NA intron (NM_008679, intron 2 of 22) intron (NM_008679, intron 2 of 22) 52194 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak1_31_55_1.71551065225392_6.66511024818456_16.2565279886887 chr1 128712548 128712994 + 16.2565279886887 NA Intergenic Intergenic -120472 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_23_305_-1.24361237460056_7.63558165539237_16.255029134775 chr8 72321278 72321768 + 16.255029134775 NA 3' UTR (NM_008452, exon 3 of 3) 3' UTR (NM_008452, exon 3 of 3) 2461 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_105_1179_-0.562217067619736_9.92346261043934_16.252418095433 chr2 32492136 32493668 + 16.252418095433 NA Intergenic PB1D10|SINE|Alu -41432 NM_146118 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak2_105_1179_-0.562217067619736_9.92346261043934_16.252418095433 chr8 108722065 108724311 + 16.252418095433 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 8544 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_576_5455_0.227188594924515_12.5272222264864_16.2455082760587 chr1 58422277 58424558 + 16.2455082760587 NA intron (NM_001042634, intron 1 of 12) CpG 671 NR_027853 12747 Mm.1761 NM_009905 ENSMUSG00000026034 Clk1 STY CDC-like kinase 1 protein-coding common_peak2_369_3002_0.302312789718938_11.7033451544166_16.2445971713371 chr1 152088005 152091325 + 16.2445971713371 NA intron (NM_197990, intron 1 of 5) CpG 655 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak2_90_387_0.77243220053292_8.98612894245359_16.2413742140924 chr8 33897297 33899541 + 16.2413742140924 NA intron (NM_001286168, intron 1 of 7) intron (NM_001286168, intron 1 of 7) 31444 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_80_903_-0.653836879422309_9.49326052270403_16.2395992777449 chr6 125164879 125165739 + 16.2395992777449 NA exon (NM_001289726, exon 2 of 7) exon (NM_001289726, exon 2 of 7) 464 NM_008084 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding unique_peak2_41_489_-0.932550984017716_8.47036244699371_16.2310862739761 chr9 40454703 40456331 + 16.2310862739761 NA exon (NM_172768, exon 1 of 20) exon (NM_172768, exon 1 of 20) 247 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak2_37_80_1.48712651169862_7.08341325873394_16.2308259352044 chr4 98395582 98396342 + 16.2308259352044 NA intron (NM_172696, intron 1 of 43) CpG 136 NM_172696 12695 Mm.90218 NM_007704 ENSMUSG00000061859 Patj Cipp|Inadl PATJ, crumbs cell polarity complex component protein-coding common_peak1_26_335_-1.17010985593916_7.80726249480918_16.2291572119072-2 chr7 145111931 145112476 + 16.2291572119072 NA Intergenic Intergenic 95916 NR_033626 100040049 Mm.102235 NR_033626 ENSMUSG00000109305 1810010D01Rik Gm2572 RIKEN cDNA 1810010D01 gene ncRNA common_peak1_26_335_-1.17010985593916_7.80726249480918_16.2291572119072 chr2 126496829 126497503 + 16.2291572119072 NA Intergenic Intergenic -5613 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak2_50_143_1.17774577568514_7.75879788928488_16.2260257083491 chr8 88299424 88300476 + 16.2260257083491 NA intron (NM_001037724, intron 3 of 27) intron (NM_001037724, intron 3 of 27) 5746 NM_001037724 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding common_peak1_151_853_0.542108877335467_10.0091466982882_16.2250989644749 chr4 43453117 43455086 + 16.2250989644749 NA intron (NM_007654, intron 2 of 8) intron (NM_007654, intron 2 of 8) 525 NM_001110320 12517 Mm.188157 NM_007654 ENSMUSG00000028459 Cd72 CD72c|Ly-19|Ly-32|Ly-m19|Lyb-2 CD72 antigen protein-coding unique_peak1_33_63_1.63014857216053_6.81507428608026_16.2248487360305 chr12 100878070 100878766 + 16.2248487360305 NA exon (NM_001177674, exon 3 of 3) exon (NM_001177674, exon 3 of 3) 21106 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding common_peak1_82_924_-0.643803686235326_9.53140771228601_16.2178660448178 chr14 27404641 27405619 + 16.2178660448178 NA Intergenic B1_Mus2|SINE|Alu -23717 NM_028945 218850 Mm.247767 NM_028945 ENSMUSG00000040651 Fam208a 4732418E12|4933409E02Rik|D14Abb1e|MommeD6 family with sequence similarity 208, member A protein-coding common_peak1_139_1567_-0.480039507218962_10.3746900905057_16.2094389373945 chr8 72342660 72344676 + 16.2094389373945 NA intron (NM_001289859, intron 21 of 21) intron (NM_001289859, intron 21 of 21) 24606 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak2_180_1102_0.481990239884979_10.3482121955339_16.208489799915 chr2 144368255 144369986 + 16.208489799915 NA promoter-TSS (NM_181417) promoter-TSS (NM_181417) 85 NM_181417 228714 Mm.227925 NM_181417 ENSMUSG00000027425 Csrp2bp 2510008M08Rik|ATAC2|AU023459|D2Ertd473e|D2Wsu131e|E430020F17|Kat14 cysteine and glycine-rich protein 2 binding protein protein-coding unique_peak2_30_376_-1.09173850853436_8.01255145900149_16.2055178251877 chr9 79918695 79920511 + 16.2055178251877 NA intron (NM_001081243, intron 1 of 5) intron (NM_001081243, intron 1 of 5) 58279 NM_001081243 70598 Mm.23049 NM_001081243 ENSMUSG00000034898 Filip1 5730485H21Rik|AI843021 filamin A interacting protein 1 protein-coding common_peak2_71_263_0.913515864886925_8.50115205180192_16.2029836201606 chr8 64849355 64850637 + 16.2029836201606 NA promoter-TSS (NM_178633) promoter-TSS (NM_178633) -72 NM_178633 77113 Mm.350347 NM_178633 ENSMUSG00000031605 Klhl2 6030411N21Rik|ABP-KELCH|AU020744|Mav kelch-like 2, Mayven protein-coding common_peak2_127_659_0.60976798243842_9.67120620546503_16.2026227169019 chr9 14365025 14368447 + 16.2026227169019 NA intron (NM_028013, intron 1 of 1) intron (NM_028013, intron 1 of 1) 14506 NM_028013 71946 Mm.41423 NM_028013 ENSMUSG00000037419 Endod1 2210414F18Rik|2310067E08Rik|C85344 endonuclease domain containing 1 protein-coding common_peak2_54_164_1.1149688041401_7.92380661631587_16.2021481294214 chr19 10697907 10699203 + 16.2021481294214 NA intron (NM_181403, intron 1 of 4) intron (NM_181403, intron 1 of 4) 9740 NM_181403 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding common_peak2_199_2283_-0.391494809667391_10.9615995305291_16.2017094743736 chr17 45571838 45574858 + 16.2017094743736 NA promoter-TSS (NM_008302) promoter-TSS (NM_008302) -87 NM_008302 15516 Mm.2180 NM_008302 ENSMUSG00000023944 Hsp90ab1 90kDa|AL022974|C81438|Hsp84|Hsp84-1|Hsp90|Hspcb heat shock protein 90 alpha (cytosolic), class B member 1 protein-coding common_peak2_106_500_0.690303626160565_9.31381860627549_16.1987168613973 chr10 78425106 78426629 + 16.1987168613973 NA intron (NM_007793, intron 1 of 2) CpG 197 NM_007793 13014 Mm.6095 NM_007793 ENSMUSG00000005054 Cstb AA960480|Stfb cystatin B protein-coding common_peak1_133_1497_-0.491665897122671_10.3029889598974_16.194526983444 chr19 53421284 53422149 + 16.194526983444 NA Intergenic Intergenic -31143 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak2_236_1620_0.403565231749061_10.8644509913921_16.1930378037564 chr11 54437509 54439675 + 16.1930378037564 NA intron (NM_173753, intron 1 of 17) CpG 413 NM_173753 216742 Mm.34087 NM_173753 ENSMUSG00000035992 Fnip1 A730024A03Rik|AI838773|AW557298 folliculin interacting protein 1 protein-coding unique_peak2_14_215_-1.57284338075212_6.96846581178741_16.1894699428804 chr10 120616779 120617725 + 16.1894699428804 NA Intergenic Intergenic -140317 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding common_peak2_423_3613_0.276197908137581_11.9574797449334_16.1886183029472 chr8 69917724 69923233 + 16.1886183029472 NA intron (NM_001286450, intron 3 of 12) intron (NM_001286450, intron 3 of 12) -17920 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak1_96_429_0.73714551377395_9.11676560647643_16.1872461820943 chr16 16870642 16871613 + 16.1872461820943 NA intron (NM_011624, intron 1 of 17) intron (NM_011624, intron 1 of 17) 236 NM_011624 21976 Mm.326089 NM_011624 ENSMUSG00000022779 Top3b - topoisomerase (DNA) III beta protein-coding common_peak2_100_457_0.717644405508514_9.1980259908512_16.1853471772258 chr4 45971809 45973143 + 16.1853471772258 NA intron (NM_146142, intron 1 of 16) CpG 179 NM_146142 100121 Mm.275413 NM_146142 ENSMUSG00000035517 Tdrd7 5730495N10Rik|AI447470|PCTAIRE2BP tudor domain containing 7 protein-coding common_peak2_215_1421_0.428338750779247_10.687875125009_16.1844903034007 chr5 110175833 110177798 + 16.1844903034007 NA promoter-TSS (NR_040431) promoter-TSS (NR_040431) 114 NM_008146 269682 Mm.9392 NM_008146 ENSMUSG00000029502 Golga3 5330413L04|5430416E01Rik|AI449376|AW490576|G1-499-14|Mea-2|Mea2|repro27 golgi autoantigen, golgin subfamily a, 3 protein-coding common_peak2_171_1023_0.498951792626663_10.2494758963133_16.1843825511102 chr1 131203062 131206780 + 16.1843825511102 NA intron (NM_018750, intron 2 of 5) intron (NM_018750, intron 2 of 5) -4736 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding unique_peak2_34_416_-1.02245785892113_8.1926746439841_16.1831406504945 chr7 63929233 63931043 + 16.1831406504945 NA intron (NM_021366, intron 1 of 1) ORR1D2|LTR|ERVL-MaLR 8777 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak2_108_1212_-0.552621599590873_9.96805303532507_16.1816994271349 chr11 97883222 97885053 + 16.1816994271349 NA promoter-TSS (NM_001081435) promoter-TSS (NM_001081435) 17 NM_001081435 72973 Mm.245939 NM_001081435 ENSMUSG00000070336 Fbxo47 2900052P03Rik|Gm1562 F-box protein 47 protein-coding unique_peak2_33_406_-1.03873641210572_8.14951677821339_16.1781137536688 chr12 93229626 93231482 + 16.1781137536688 NA Intergenic Intergenic 214269 NR_126436 75295 Mm.243878 NR_126436 4930559C10Rik - RIKEN cDNA 4930559C10 gene ncRNA unique_peak2_3_100_-2.81518284199934_5.25062006175213_16.1770889484953 chr15 81085984 81086863 + 16.1770889484953 NA intron (NM_001082536, intron 2 of 13) intron (NM_001082536, intron 2 of 13) 18624 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding unique_peak2_3_100_-2.81518284199934_5.25062006175213_16.1770889484953-2 chr7 80641907 80643012 + 16.1770889484953 NA non-coding (NR_040343, exon 5 of 5) non-coding (NR_040343, exon 5 of 5) 6442 NR_040343 100504375 Mm.322881 NR_040343 ENSMUSG00000084821 Gm15880 OTTMUSG00000027171 predicted gene 15880 ncRNA unique_peak2_15_225_-1.52392569929002_7.05821611277018_16.1741860474545 chr17 56303238 56304773 + 16.1741860474545 NA promoter-TSS (NM_001111078) promoter-TSS (NM_001111078) -308 NM_001111078 18140 Mm.42196 NM_010931 ENSMUSG00000001228 Uhrf1 AL022808|ICBP90|Np95|RNF106 ubiquitin-like, containing PHD and RING finger domains, 1 protein-coding common_peak2_303_2294_0.342535009841145_11.3355459432217_16.1717699214809 chr1 165459265 165462069 + 16.1717699214809 NA promoter-TSS (NM_028759) promoter-TSS (NM_028759) -204 NM_028759 74106 Mm.227605 NM_028759 ENSMUSG00000026571 Dcaf6 1200006M05Rik|Iqwd1|PC326 DDB1 and CUL4 associated factor 6 protein-coding common_peak2_86_967_-0.626065406608742_9.60583053397022_16.1706142293824 chr1 7396579 7398853 + 16.1706142293824 NA Intergenic Intergenic 308796 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding common_peak1_65_740_-0.729397473458597_9.16863099557654_16.1695668906077 chr7 25076343 25077006 + 16.1695668906077 NA promoter-TSS (NM_175477) promoter-TSS (NM_175477) -531 NM_001168506 232976 Mm.41568 NM_175477 ENSMUSG00000045252 Zfp574 A630056B21Rik|Znf574 zinc finger protein 574 protein-coding common_peak2_535_4947_0.237750848732421_12.3915052093426_16.1657906640835 chr2 6716143 6725056 + 16.1657906640835 NA intron (NM_001310447, intron 1 of 11) intron (NM_001310447, intron 1 of 11) 1063 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_42_498_-0.917168835083309_8.50431158779561_16.1598479188166 chr6 48717840 48718462 + 16.1598479188166 NA promoter-TSS (NM_146167) promoter-TSS (NM_146167) -470 NM_146167 231932 Mm.30479 NM_146167 ENSMUSG00000043931 Gimap7 IAN7|Ian3 GTPase, IMAP family member 7 protein-coding common_peak1_87_978_-0.622142684537032_9.62409370733518_16.1572704889079 chr6 130158494 130160353 + 16.1572704889079 NA intron (NR_104105, intron 1 of 5) intron (NR_104105, intron 1 of 5) 1325 NR_104106 654449 Mm.439698 NM_008461 ENSMUSG00000072721 Klra14-ps EG654449|Gm15858|Klra14|Klra29|Klra31|Ly49N|OTTMUSG00000026959 killer cell lectin-like receptor subfamily A, member 14, pseudogene pseudo common_peak2_564_5307_0.229672429680527_12.4887888702105_16.1530530180935 chr10 80146510 80153717 + 16.1530530180935 NA exon (NM_001305798, exon 2 of 8) exon (NM_001305798, exon 2 of 8) 431 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding common_peak2_233_1592_0.406159725422192_10.8406104142364_16.1487256681894 chr9 37655622 37657928 + 16.1487256681894 NA intron (NM_025289, intron 1 of 8) intron (NM_025289, intron 1 of 8) 537 NM_025289 21376 Mm.28689 NM_025289 ENSMUSG00000011114 Tbrg1 AA408552|AA409675|Niam|Tb-5|mFLJ00213 transforming growth factor beta regulated gene 1 protein-coding common_peak1_46_540_-0.876353696400798_8.64130793562642_16.1429943642419 chr10 127311842 127312492 + 16.1429943642419 NA promoter-TSS (NM_001171582) promoter-TSS (NM_001171582) -381 NM_001171582 216443 Mm.28173 NM_001003913 ENSMUSG00000040354 Mars Metrs|Mtrns methionine-tRNA synthetase protein-coding common_peak2_470_4163_0.257855797259518_12.1526822519292_16.1379802157677 chr15 81855793 81860891 + 16.1379802157677 NA promoter-TSS (NM_020507) promoter-TSS (NM_020507) -16 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding unique_peak2_12_194_-1.67852138029503_6.76806962360209_16.1345884214413 chr10 80136749 80138069 + 16.1345884214413 NA promoter-TSS (NM_001195268) promoter-TSS (NM_001195268) -22 NM_001195268 100503659 Mm.485395 NM_015761 ENSMUSG00000035640 Cbarp 9630008F14|Dos|R29144/1 calcium channel, voltage-dependent, beta subunit associated regulatory protein protein-coding common_peak2_73_825_-0.68360200902168_9.34819696690861_16.1305522879146 chr3 97767243 97768911 + 16.1305522879146 NA promoter-TSS (NM_178080) promoter-TSS (NM_178080) -63 NM_178080 83679 Mm.129840 NM_031401 ENSMUSG00000038170 Pde4dip 4732458A06Rik|9430063L05Rik|C87016|D130016K21Rik|D3Bwg1078e|Usmg4|mKIAA0454 phosphodiesterase 4D interacting protein (myomegalin) protein-coding common_peak1_432_3718_0.2720494050697_11.9967237351468_16.1305109767614 chr5 25497566 25500583 + 16.1305109767614 NA promoter-TSS (NR_030700) promoter-TSS (NR_030700) -291 NM_001081383 231051 Mm.332268 NM_001081383 ENSMUSG00000038056 Kmt2c E330008K23Rik|HALR|Mll3|mKIAA1506 lysine (K)-specific methyltransferase 2C protein-coding common_peak1_45_529_-0.884775434170697_8.60746083236521_16.1224917835909 chr1 134110415 134111093 + 16.1224917835909 NA promoter-TSS (NM_001284525) promoter-TSS (NM_001284525) -488 NM_001284524 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding common_peak2_82_334_0.821488583823212_8.79876157725674_16.1188026080703 chr7 80889175 80890478 + 16.1188026080703 NA TTS (NM_028026) TTS (NM_028026) 11443 NM_028026 71968 Mm.274226 NM_028026 ENSMUSG00000025722 Wdr73 1200011I23Rik|2410008B13Rik|AI848574|C85352 WD repeat domain 73 protein-coding common_peak2_73_276_0.892653796348577_8.56006906422348_16.1152742643322 chr14 104521818 104522994 + 16.1152742643322 NA intron (NM_026047, intron 1 of 5) CpG 260 NM_026047 72486 Mm.291811 NM_026047 ENSMUSG00000022120 Rnf219 2610206B13Rik|2810449K13Rik|AI451544 ring finger protein 219 protein-coding common_peak2_106_1188_-0.556562580389883_9.93725170955071_16.1067805784034 chr7 51724159 51726360 + 16.1067805784034 NA Intergenic Intergenic 103429 NM_080853 140919 Mm.256618 NM_080853 ENSMUSG00000030500 Slc17a6 2900073D12Rik|DNPI|VGLUT2 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 protein-coding common_peak2_459_4034_0.261438055179399_12.1090719857548_16.1065016382824 chr17 47736824 47740585 + 16.1065016382824 NA intron (NM_001161723, intron 1 of 8) intron (NM_001161723, intron 1 of 8) 773 NM_001161723 21425 Mm.2305 NM_011549 ENSMUSG00000023990 Tfeb Tcfeb|bHLHe35 transcription factor EB protein-coding unique_peak2_44_518_-0.89341209079325_8.57288468296126_16.1060426485196 chr11 86827011 86828844 + 16.1060426485196 NA intron (NR_106195, intron 2 of 8) intron (NR_106195, intron 2 of 8) -20267 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding common_peak1_18_254_-1.39398923346197_7.29735882012787_16.1043828395072 chrX 167108704 167109164 + 16.1043828395072 NA Intergenic Intergenic -38564 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak1_119_1336_-0.522902695122937_10.1233324025319_16.0970151071326 chr15 57891576 57892720 + 16.0970151071326 NA exon (NM_024207, exon 1 of 8) exon (NM_024207, exon 1 of 8) 270 NM_024207 67819 Mm.289387 NM_024207 ENSMUSG00000022365 Derl1 1110021N07Rik|AI195141|AW551338|Derlin-1 Der1-like domain family, member 1 protein-coding common_peak2_136_1531_-0.484863025390098_10.3387690692299_16.0933367415991 chr7 113368344 113370409 + 16.0933367415991 NA promoter-TSS (NM_133700) promoter-TSS (NM_133700) -37 NM_133700 68815 Mm.238034 NM_133700 ENSMUSG00000038187 Btbd10 1110056N09Rik|Gmrp1 BTB (POZ) domain containing 10 protein-coding common_peak1_210_1375_0.434334584436865_10.6434320469205_16.0894211829585 chr13 51734058 51736600 + 16.0894211829585 NA intron (NM_001281880, intron 2 of 16) ID_B1|SINE|B4 58418 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_103_1155_-0.566279815487034_9.89178577475716_16.0889874883137 chr14 75033030 75034505 + 16.0889874883137 NA intron (NM_198642, intron 2 of 13) intron (NM_198642, intron 2 of 13) 17740 NM_198642 271221 Mm.320280 NM_198642 ENSMUSG00000034959 Rubcnl 5031414D18Rik|Gm744|Gm911|Kiaa0226l RUN and cysteine rich domain containing beclin 1 interacting protein like protein-coding common_peak2_51_149_1.15321486533141_7.80542612316158_16.088127656878 chr2 101822529 101823576 + 16.088127656878 NA intron (NM_001110849, intron 2 of 9) intron (NM_001110849, intron 2 of 9) 15928 NM_001110849 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_40_94_1.39158765673448_7.26564943669819_16.0760909989493 chr5 115509514 115510496 + 16.0760909989493 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 3329 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak2_257_1828_0.379634637844873_11.0266566786712_16.0702107583637 chr18 11656476 11658923 + 16.0702107583637 NA intron (NR_045526, intron 1 of 17) CpG 350 NM_001081223 225182 Mm.154275 NM_175458 ENSMUSG00000041238 Rbbp8 9930104E21Rik|CtIP|RBBP-8|RIM|SAE2 retinoblastoma binding protein 8 protein-coding common_peak2_118_591_0.637619004610695_9.5282628679343_16.0673958099602 chr3 109339869 109342436 + 16.0673958099602 NA exon (NM_020505, exon 1 of 27) exon (NM_020505, exon 1 of 27) 469 NM_020505 57257 Mm.282257 NM_020505 ENSMUSG00000033721 Vav3 A530094I06Rik|AA986410|Idd18.1 vav 3 oncogene protein-coding common_peak2_422_3604_0.275616575604401_11.9535918319304_16.0659796916984 chr5 137745272 137750242 + 16.0659796916984 NA exon (NM_029805, exon 2 of 6) exon (NM_029805, exon 2 of 6) 1788 NM_023910 78829 Mm.286399 NM_023910 ENSMUSG00000029723 Tsc22d4 0610009M14Rik|1700023B23Rik|AI415410|Thg-1pit|Tilz2 TSC22 domain family, member 4 protein-coding common_peak1_37_446_-0.977154506600072_8.31555376788328_16.0612954232414-2 chr6 128770406 128771013 + 16.0612954232414 NA Intergenic Intergenic 17932 NM_008527 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak1_37_446_-0.977154506600072_8.31555376788328_16.0612954232414 chr13 21721226 21721870 + 16.0612954232414 NA promoter-TSS (NM_178200) promoter-TSS (NM_178200) -496 NM_178200 319186 Mm.277425 NM_178200 ENSMUSG00000096807 Hist1h2bm H2b-291b histone cluster 1, H2bm protein-coding unique_peak1_18_13_2.79300928133929_5.20385956272725_16.0592559551118 chr1 79710405 79710782 + 16.0592559551118 NA intron (NM_001111279, intron 8 of 11) intron (NM_001111279, intron 8 of 11) -38621 NM_183027 252903 Mm.32409 NM_183027 ENSMUSG00000054702 Ap1s3 1190009B22|Jr2|[s]3A adaptor-related protein complex AP-1, sigma 3 protein-coding common_peak2_31_385_-1.06959146295656_8.0576613057898_16.0570782442014 chr4 107253034 107254508 + 16.0570782442014 NA promoter-TSS (NM_028394) promoter-TSS (NM_028394) -163 NM_028394 72938 Mm.21787 NM_028394 ENSMUSG00000063172 Hspb11 2900042B11Rik|IFT25 heat shock protein family B (small), member 11 protein-coding common_peak1_34_415_-1.01899400361756_8.19094271633231_16.0562814703628 chr15 80082868 80083536 + 16.0562814703628 NA promoter-TSS (NR_028281) promoter-TSS (NR_028281) 204 NM_013762 27367 Mm.290771 NM_013762 ENSMUSG00000060036 Rpl3 F2|J1 ribosomal protein L3 protein-coding common_peak2_285_2110_0.355091794421627_11.221256760558_16.0556356886802 chr2 156884399 156887911 + 16.0556356886802 NA intron (NM_029983, intron 1 of 7) intron (NM_029983, intron 1 of 7) 923 NM_029983 77799 Mm.29264 NM_029983 ENSMUSG00000027636 Sla2 A930009E21Rik|AI430952|SLAP-2|SLAP2 Src-like-adaptor 2 protein-coding common_peak1_172_1033_0.495190061177615_10.2616155009037_16.0555439892374 chr2 34956829 34958243 + 16.0555439892374 NA intron (NM_009421, intron 5 of 10) intron (NM_009421, intron 5 of 10) 4236 NM_009421 22029 Mm.239514 NM_009421 ENSMUSG00000026875 Traf1 4732496E14Rik TNF receptor-associated factor 1 protein-coding unique_peak1_21_21_2.40036612405665_5.65961468066562_16.0551536409365 chr13 59457587 59458165 + 16.0551536409365 NA intron (NM_001284221, intron 24 of 24) intron (NM_001284221, intron 24 of 24) 86575 NM_001284221 67269 Mm.153008 NM_023328 ENSMUSG00000021557 Agtpbp1 1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd ATP/GTP binding protein 1 protein-coding common_peak1_234_1603_0.403778247849417_10.8493475503796_16.0545134762401 chr4 120950870 120952562 + 16.0545134762401 NA promoter-TSS (NM_001005788) promoter-TSS (NM_001005788) -15 NM_001005788 381549 Mm.331840 NM_001005788 ENSMUSG00000064141 Zfp69 Gm1029|Krab2|Zfp63 zinc finger protein 69 protein-coding common_peak2_43_508_-0.905111792195388_8.538965949978_16.0521442525278 chr1 125435823 125436919 + 16.0521442525278 NA promoter-TSS (NM_001205386) promoter-TSS (NM_001205386) -644 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak1_302_3583_-0.306372212298863_11.6541688159082_16.0519130449091 chr8 13598446 13602591 + 16.0519130449091 NA intron (NM_009025, intron 4 of 23) intron (NM_009025, intron 4 of 23) -38057 NM_001080781 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak2_159_1799_-0.442810030027193_10.5923761762034_16.0501548392884 chr10 40256935 40259645 + 16.0501548392884 NA promoter-TSS (NM_026113) promoter-TSS (NM_026113) -625 NM_026113 67371 Mm.64104 NM_026113 ENSMUSG00000019837 Gtf3c6 2410016F19Rik|AU019813 general transcription factor IIIC, polypeptide 6, alpha protein-coding common_peak1_32_395_-1.05203667241873_8.10333828387025_16.0498303849235 chr8 116637119 116638106 + 16.0498303849235 NA intron (NM_029441, intron 1 of 6) MER58A|DNA|hAT-Charlie 95379 NM_029441 75796 Mm.159575 NM_029441 ENSMUSG00000031758 Cdyl2 1700029M19Rik|4930453I21Rik|Gm20194 chromodomain protein, Y chromosome-like 2 protein-coding unique_peak2_33_405_-1.03518734502465_8.14774224467285_16.0497702342571 chr2 155537329 155538576 + 16.0497702342571 NA intron (NM_019811, intron 2 of 17) intron (NM_019811, intron 2 of 17) 18978 NR_040613 74945 Mm.401956 NR_040613 ENSMUSG00000086529 Acss2os 4930471I20Rik acyl-CoA synthetase short-chain family member 2, opposite strand ncRNA common_peak2_62_210_1.0005099712446_8.22135417432948_16.046699980782 chr1 54843441 54845132 + 16.046699980782 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 82101 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_303_3596_-0.305764995993064_11.6596959461388_16.0370925209557 chr4 63399551 63402244 + 16.0370925209557 NA intron (NM_001045514, intron 1 of 21) intron (NM_001045514, intron 1 of 21) 2548 NM_001045514 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak1_150_846_0.542302225653353_9.99736927215887_16.0357082345075 chr1 36796533 36799176 + 16.0357082345075 NA intron (NM_018872, intron 35 of 40) intron (NM_018872, intron 35 of 40) 18870 NM_001289612 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak1_641_6289_0.210872944928761_12.724280774231_16.0314573914993 chr4 133622732 133627448 + 16.0314573914993 NA intron (NM_001017968, intron 2 of 7) intron (NM_001017968, intron 2 of 7) 8339 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak1_61_696_-0.75172032994776_9.06915468089454_16.0299907224966 chr8 54440874 54441831 + 16.0299907224966 NA Intergenic MTD|LTR|ERVL-MaLR 88646 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak1_294_3479_-0.311239598815945_11.6092517913281_16.029036050942 chr12 25092383 25096099 + 16.029036050942 NA 3' UTR (NM_010496, exon 3 of 3) 3' UTR (NM_010496, exon 3 of 3) 1851 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak2_123_630_0.618410632124469_9.61070151104478_16.026585650089 chr1 82315994 82317367 + 16.026585650089 NA intron (NM_029777, intron 1 of 6) CpG 101 NM_029777 76867 Mm.226994 NM_029777 ENSMUSG00000026142 Rhbdd1 4930418P06Rik|RRP4|mRHBDD1 rhomboid domain containing 1 protein-coding common_peak1_78_878_-0.657620264030088_9.45090922312836_16.0261244153357 chr17 25920121 25921074 + 16.0261244153357 NA promoter-TSS (NM_139154) promoter-TSS (NM_139154) -883 NM_139154 224624 Mm.328872 NM_139154 ENSMUSG00000025730 Rab40c RAR3 Rab40C, member RAS oncogene family protein-coding common_peak2_87_368_0.785545359006267_8.92024968556353_16.0252208063105 chr9 57157499 57158751 + 16.0252208063105 NA intron (NM_025417, intron 1 of 7) intron (NM_025417, intron 1 of 7) 174 NM_025417 66199 Mm.41687 NM_025417 ENSMUSG00000032299 Commd4 1110039H05Rik COMM domain containing 4 protein-coding common_peak1_55_632_-0.79288462822406_8.90961937531631_16.0189518370133 chr11 69365994 69366820 + 16.0189518370133 NA intron (NM_146019, intron 1 of 39) intron (NM_146019, intron 1 of 39) 3019 NM_146019 216848 Mm.178246 NM_146019 ENSMUSG00000018474 Chd3 2600010P09Rik|AF020312|Chd7|Prp7|Prp9-1 chromodomain helicase DNA binding protein 3 protein-coding unique_peak1_29_48_1.79394658848249_6.51168313835646_16.0179494729428 chr15 64237713 64238374 + 16.0179494729428 NA intron (NM_001276462, intron 1 of 27) intron (NM_001276462, intron 1 of 27) 74630 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_293_2193_0.348275253847129_11.2734854373268_16.0175920575664 chr7 66387156 66389138 + 16.0175920575664 NA intron (NM_146191, intron 1 of 33) CpG 194 NM_146191 233328 Mm.33284 NM_146191 ENSMUSG00000015133 Lrrk1 AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790 leucine-rich repeat kinase 1 protein-coding common_peak1_130_1460_-0.495653200956625_10.2649138623252_16.0173010202604 chr18 37934384 37935458 + 16.0173010202604 NA intron (NM_001305981, intron 1 of 28) CpG 502 NM_001305980 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding unique_peak2_14_214_-1.56614872817811_6.9651184855004_16.0156506740908 chr9 31300480 31301990 + 16.0156506740908 NA Intergenic Intergenic -13872 NM_001080817 382066 Mm.335039 NM_199315 ENSMUSG00000042496 Prdm10 Gm1112|tristanin PR domain containing 10 protein-coding common_peak1_537_4976_0.235910761078344_12.3990160522162_16.0124534310295 chr4 62633439 62638500 + 16.0124534310295 NA intron (NM_019492, intron 16 of 19) intron (NM_019492, intron 16 of 19) 16297 NM_134257 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_88_375_0.778429517086551_8.94380361022091_16.0071917134113 chr17 25941346 25942229 + 16.0071917134113 NA TTS (NM_001039038) TTS (NM_001039038) 202 NM_001291025 14755 Mm.362054 NM_011822 ENSMUSG00000025728 Pigq Gpi1|Gpi1h|Gpi1p|Gpih phosphatidylinositol glycan anchor biosynthesis, class Q protein-coding common_peak1_262_3066_-0.332171431991558_11.4165267352712_15.9998788895098 chr2 112265541 112268567 + 15.9998788895098 NA exon (NM_133649, exon 1 of 25) exon (NM_133649, exon 1 of 25) 740 NM_133649 107723 Mm.491155 NM_133648 ENSMUSG00000027130 Slc12a6 9530023I19Rik|KCC3|gaxp solute carrier family 12, member 6 protein-coding common_peak1_352_2820_0.309276260074391_11.6166290806228_15.9980963209709 chr16 8830027 8831605 + 15.9980963209709 NA intron (NM_001081400, intron 1 of 3) CpG 716 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak2_171_1941_-0.424375692792529_10.7111396390229_15.9979392037196 chr11 102555280 102557176 + 15.9979392037196 NA promoter-TSS (NM_001159492) promoter-TSS (NM_001159492) -70 NM_001159492 237943 Mm.260282 NM_001159492 ENSMUSG00000034621 Gpatch8 5430405G24Rik|AU018890|ENSMUSG00000075516|Fbm1|Gpatc8|mKIAA0553 G patch domain containing 8 protein-coding common_peak1_41_487_-0.926650382578032_8.46741214627387_15.9964995312017 chr5 24451016 24451660 + 15.9964995312017 NA promoter-TSS (NM_139153) promoter-TSS (NM_139153) -839 NM_139153 213990 Mm.250703 NM_139153 ENSMUSG00000023353 Agap3 AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_13_3_4.05995243883157_4.02997621941578_15.994642436259-3 chr13 32479905 32480272 + 15.994642436259 NA Intergenic Intergenic -141544 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding unique_peak1_13_3_4.05995243883157_4.02997621941578_15.994642436259-4 chr7 130435911 130436207 + 15.994642436259 NA intron (NM_001271343, intron 10 of 11) intron (NM_001271343, intron 10 of 11) 83521 NM_001136054 11907 Mm.216321 NM_013799 ENSMUSG00000030850 Ate1 AI225793|AW547406 arginyltransferase 1 protein-coding unique_peak1_13_3_4.05995243883157_4.02997621941578_15.994642436259 chr10 67466095 67466548 + 15.994642436259 NA Intergenic Intergenic -71548 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding unique_peak1_13_3_4.05995243883157_4.02997621941578_15.994642436259-2 chr11 33976793 33977207 + 15.994642436259 NA intron (NM_001190886, intron 1 of 7) intron (NM_001190886, intron 1 of 7) 13987 NM_031169 16533 Mm.6206 NM_031169 ENSMUSG00000020155 Kcnmb1 BKbeta1 potassium large conductance calcium-activated channel, subfamily M, beta member 1 protein-coding common_peak2_111_539_0.662973775339806_9.40830248472074_15.9919098552785 chr1 165815802 165817679 + 15.9919098552785 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 28059 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding unique_peak1_26_37_1.97428005339601_6.23506754014159_15.9914193485396-2 chr12 4436304 4436746 + 15.9914193485396 NA intron (NM_010881, intron 1 of 22) intron (NM_010881, intron 1 of 22) 40657 NM_010881 17977 Mm.301039 NM_010881 ENSMUSG00000020647 Ncoa1 KAT13A|NCoA-1|NRC-1|SRC-1|SRC-a|SRC1|bHLHe74|mNRC-1 nuclear receptor coactivator 1 protein-coding unique_peak1_26_37_1.97428005339601_6.23506754014159_15.9914193485396 chr1 118399448 118399892 + 15.9914193485396 NA intron (NM_001293300, intron 1 of 40) PB1D9|SINE|Alu 10612 NM_001293301 76707 Mm.138740 NM_029709 ENSMUSG00000064302 Clasp1 1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha CLIP associating protein 1 protein-coding common_peak2_613_5930_0.216743926636129_12.6424316197684_15.9886428466589 chr11 83076140 83081923 + 15.9886428466589 NA Intergenic Intergenic 13919 NM_011408 20556 Mm.278689 NM_011408 ENSMUSG00000072620 Slfn2 Shlf2 schlafen 2 protein-coding common_peak1_219_1461_0.420788044806191_10.7241216183555_15.9858709088996 chr14 25644911 25647233 + 15.9858709088996 NA intron (NM_001310666, intron 10 of 23) intron (NM_001310666, intron 10 of 23) 42559 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak1_90_389_0.765014728970437_8.98983767823483_15.9778913939949 chr4 45972292 45973117 + 15.9778913939949 NA intron (NM_146142, intron 1 of 16) CpG 407 NM_146142 100121 Mm.275413 NM_146142 ENSMUSG00000035517 Tdrd7 5730495N10Rik|AI447470|PCTAIRE2BP tudor domain containing 7 protein-coding common_peak1_82_335_0.817188446389588_8.80091164597355_15.9773831615374 chr17 25013662 25014989 + 15.9773831615374 NA intron (NM_020608, intron 1 of 20) CpG 905 NM_020608 57354 Mm.328854 NM_020608 ENSMUSG00000038002 Cramp1l 5830477H08Rik|AI256853|AI790734|Cramp1|Tce4|mKIAA1426 Crm, cramped-like (Drosophila) protein-coding common_peak1_38_455_-0.959946564556881_8.3529167318863_15.9693492267523 chr1 182254493 182255408 + 15.9693492267523 NA Intergenic Intergenic 27809 NM_007853 13244 Mm.29648 NM_007853 ENSMUSG00000038633 Degs1 AA536663|Degs|Des1|Mdes delta(4)-desaturase, sphingolipid 1 protein-coding common_peak1_56_642_-0.784176207777774_8.93658682343906_15.9683249964791 chr10 60396102 60397154 + 15.9683249964791 NA intron (NR_045556, intron 28 of 68) intron (NR_045556, intron 28 of 68) -3098 NM_001164374 100302688 Mm.444135 NM_001164374 ENSMUSG00000090439 Gm17455 - predicted gene, 17455 protein-coding common_peak2_144_798_0.554717208462913_9.91941029715943_15.964406803691 chr6 124744944 124746765 + 15.964406803691 NA exon (NM_007881, exon 6 of 10) exon (NM_007881, exon 6 of 10) -4775 NM_013535 14790 Mm.439877 NM_013535 ENSMUSG00000072772 Grcc10 2310033H05Rik|C10 gene rich cluster, C10 gene protein-coding common_peak2_35_72_1.54147311417901_6.96056111596952_15.9622824508225 chr16 90197487 90198022 + 15.9622824508225 NA Intergenic ORR1G|LTR|ERVL-MaLR -22988 NM_011434 20655 Mm.276325 NM_011434 ENSMUSG00000022982 Sod1 B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1 superoxide dismutase 1, soluble protein-coding common_peak1_29_364_-1.10309622116968_7.96020454318254_15.9612367095436 chr10 78185339 78186068 + 15.9612367095436 NA promoter-TSS (NM_029546) promoter-TSS (NM_029546) -554 NM_029546 110816 Mm.103522 NM_029546 ENSMUSG00000032834 Pwp2 6530411D08Rik|Pwp2h|wdp103 PWP2 periodic tryptophan protein homolog (yeast) protein-coding common_peak2_131_1471_-0.493017386023421_10.2770532630453_15.9588591485665 chr1 125465942 125468930 + 15.9588591485665 NA Intergenic B4|SINE|B4 -31709 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak2_39_466_-0.949532200892529_8.3925126392634_15.9578762262104 chr3 152927941 152929723 + 15.9578762262104 NA intron (NM_012028, intron 2 of 4) intron (NM_012028, intron 2 of 4) 53375 NM_012028 26938 Mm.40915 NM_012028 ENSMUSG00000039037 St6galnac5 AI851940|Siat7e ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding common_peak2_151_856_0.537049742843458_10.0116762655342_15.9575976738083 chr4 74250987 74253027 + 15.9575976738083 NA 5' UTR (NM_144787, exon 1 of 22) 5' UTR (NM_144787, exon 1 of 22) 128 NM_144787 76804 Mm.209059 NM_144787 ENSMUSG00000028397 Kdm4c 2410141F18Rik|AA517467|Gasc1|Jmjd2c lysine (K)-specific demethylase 4C protein-coding common_peak1_106_1186_-0.554133800286133_9.93603731949884_15.9557050155861 chr1 53850495 53852183 + 15.9557050155861 NA intron (NM_001001883, intron 21 of 28) intron (NM_001001883, intron 21 of 28) 1915 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA common_peak1_419_3572_0.275884654464262_11.9408625258174_15.9556122536971 chr11 62456072 62459191 + 15.9556122536971 NA promoter-TSS (NM_177229) promoter-TSS (NM_177229) -299 NM_177229 20185 Mm.271814 NM_011308 ENSMUSG00000018501 Ncor1 5730405M06Rik|A230020K14Rik|N-CoR|RIP13|Rxrip13|mKIAA1047 nuclear receptor co-repressor 1 protein-coding unique_peak2_4_111_-2.56944531679954_5.52263226365783_15.9494626955155 chr5 57691634 57692536 + 15.9494626955155 NA intron (NR_015588, intron 2 of 4) IAPEz-int|LTR|ERVK 25834 NR_015588 319216 Mm.332387 NR_015588 ENSMUSG00000097216 4932441J04Rik - RIKEN cDNA 4932441J04 gene ncRNA common_peak1_26_333_-1.16149672563446_7.80295592965682_15.9474992256107 chr11 79524601 79525076 + 15.9474992256107 NA intron (NM_146023, intron 2 of 3) B3|SINE|B2 -1076 NM_001077496 216984 Mm.439665 NM_001077496 ENSMUSG00000093938 Evi2b Evi-2|Evi2 ecotropic viral integration site 2b protein-coding common_peak2_101_1130_-0.569100125676007_9.85883315115182_15.9433292205122 chr16 64758054 64760289 + 15.9433292205122 NA Intergenic Intergenic 11768 NM_026273 67609 Mm.212157 NM_026273 ENSMUSG00000059920 4930453N24Rik AI649104|din RIKEN cDNA 4930453N24 gene protein-coding common_peak1_43_109_1.30505034035565_7.43388488370248_15.9432727840599 chr2 79253253 79254151 + 15.9432727840599 NA Intergenic Intergenic -1724 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_30_374_-1.08406458064894_8.00871449505878_15.9392740082033 chr7 27196353 27196870 + 15.9392740082033 NA promoter-TSS (NM_015782) promoter-TSS (NM_015782) -340 NM_001285825 53607 Mm.386890 NM_015782 ENSMUSG00000061479 Snrpa C430021M15Rik|Rnu1a-1|Rnu1a1|U1-A|U1A small nuclear ribonucleoprotein polypeptide A protein-coding common_peak1_99_452_0.71587257446286_9.18130352727766_15.9392505264035 chr15 51864440 51865534 + 15.9392505264035 NA intron (NM_080635, intron 1 of 7) intron (NM_080635, intron 1 of 7) 474 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak1_37_445_-0.973923385337058_8.31393820725178_15.9391100590424 chr10 75565733 75566460 + 15.9391100590424 NA Intergenic Intergenic -2566 NM_001305992 14598 Mm.4559 NM_008116 ENSMUSG00000006345 Ggt1 CD224|GGT|GGT 1|GGT-1|Ggtp|dwg gamma-glutamyltransferase 1 protein-coding common_peak1_43_507_-0.902274632891858_8.53754737032624_15.9374943702811 chr9 88955530 88956772 + 15.9374943702811 NA promoter-TSS (NM_009742) promoter-TSS (NM_009742) -769 NM_009742 12044 Mm.425593 NM_009742 ENSMUSG00000102037 Bcl2a1a A1|BB218357|Bcl2a1|Bfl-1|Hbpa1 B cell leukemia/lymphoma 2 related protein A1a protein-coding common_peak2_227_2624_-0.36037836551796_11.1779125246819_15.9327278763363 chr2 121447980 121451201 + 15.9327278763363 NA intron (NR_110986, intron 1 of 2) CpG 392 NR_110986 378702 Mm.262252 NM_011354 ENSMUSG00000074884 Serf2 C80083|Msmac1l|m4F5rel small EDRK-rich factor 2 protein-coding common_peak1_165_1868_-0.431932673390454_10.6520845170499_15.9314808925048 chr1 183344849 183346269 + 15.9314808925048 NA intron (NM_177389, intron 6 of 26) intron (NM_177389, intron 6 of 26) 24006 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding common_peak1_165_1868_-0.431932673390454_10.6520845170499_15.9314808925048-2 chr13 23684173 23685633 + 15.9314808925048 NA promoter-TSS (NM_178189) promoter-TSS (NM_178189) 704 NM_023422 68024 Mm.261676 NM_023422 ENSMUSG00000018102 Hist1h2bc 2610022J01Rik|H2bfs|R74621 histone cluster 1, H2bc protein-coding common_peak1_102_1142_-0.567061804437738_9.87507878599561_15.9308276149979 chr8 78820078 78821464 + 15.9308276149979 NA intron (NM_001191004, intron 1 of 4) CpG 381 NM_001191004 78651 Mm.28694 NM_030145 ENSMUSG00000031683 Lsm6 1500031N17Rik|2410088K19Rik|AI747288 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding unique_peak2_34_414_-1.01552181171075_8.18920662037891_15.929768308697 chr2 153527941 153530010 + 15.929768308697 NA intron (NM_001134300, intron 1 of 10) CpG 996 NM_001134300 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding common_peak1_34_414_-1.01552181171075_8.18920662037891_15.929768308697 chr16 78540698 78541417 + 15.929768308697 NA 3' UTR (NM_001252440, exon 5 of 5) 3' UTR (NM_001252440, exon 5 of 5) -19259 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak2_583_5552_0.223104279352967_12.5506038202682_15.9232704944172 chr1 58421663 58424825 + 15.9232704944172 NA intron (NM_001042634, intron 1 of 12) intron (NM_001042634, intron 1 of 12) 844 NR_027853 12747 Mm.1761 NM_009905 ENSMUSG00000026034 Clk1 STY CDC-like kinase 1 protein-coding common_peak1_32_394_-1.04838889540359_8.10151439536267_15.9202803446096 chr19 46714347 46715102 + 15.9202803446096 NA intron (NM_020577, intron 6 of 10) B4A|SINE|B4 7281 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak2_232_1586_0.404025148038667_10.8340989868545_15.9160115281822 chr4 147903931 147905421 + 15.9160115281822 NA promoter-TSS (NM_001285923) promoter-TSS (NM_001285923) 22 NM_001285923 170731 Mm.154312 NM_133201 ENSMUSG00000029020 Mfn2 D630023P19Rik|Fzo mitofusin 2 protein-coding common_peak1_79_888_-0.651680758826281_9.47019922941663_15.9148102705828 chr8 120538972 120539969 + 15.9148102705828 NA TTS (NR_106159) TTS (NR_106159) 774 NR_106159 102466849 NR_106159 ENSMUSG00000098280 Mir7687 Gm27573|mmu-mir-7687 microRNA 7687 ncRNA unique_peak2_64_727_-0.7308801198658_9.1423545802658_15.9089362274655 chr7 120834445 120836493 + 15.9089362274655 NA Intergenic Intergenic -7362 NM_007908 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak1_164_1856_-0.433332565396221_10.6420918172373_15.9081604241748 chr14 31336211 31337702 + 15.9081604241748 NA exon (NM_009796, exon 1 of 21) exon (NM_009796, exon 1 of 21) 232 NM_009796 12339 Mm.201535 NM_009796 ENSMUSG00000021893 Capn7 AU022319|PalBH calpain 7 protein-coding unique_peak1_32_60_1.64658261009799_6.75402864261188_15.9079029829173 chr15 98108231 98108933 + 15.9079029829173 NA 5' UTR (NM_001163487, exon 1 of 23) 5' UTR (NM_001163487, exon 1 of 23) 111 NM_001163487 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding common_peak1_87_975_-0.617714972496223_9.62187985131477_15.9076632534424 chr2 164521925 164522858 + 15.9076632534424 NA Intergenic Intergenic 24866 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak1_141_774_0.561719356871773_9.87891217859749_15.8978169897042 chr1 181143704 181145077 + 15.8978169897042 NA promoter-TSS (NM_026171) promoter-TSS (NM_026171) -186 NM_026171 67459 Mm.263464 NM_026171 ENSMUSG00000026516 Nvl 1200009I24Rik nuclear VCP-like protein-coding common_peak1_307_2341_0.336420802644563_11.3617357618235_15.8888910244644 chr3 133090295 133092731 + 15.8888910244644 NA promoter-TSS (NM_027927) promoter-TSS (NM_027927) 227 NM_026231 67553 Mm.304899 NM_026231 ENSMUSG00000028018 Gstcd 4933434L15Rik glutathione S-transferase, C-terminal domain containing protein-coding common_peak1_160_1808_-0.438979779262262_10.6014868029901_15.8880877204294 chr2 120404106 120405601 + 15.8880877204294 NA promoter-TSS (NM_001110496) promoter-TSS (NM_001110496) -737 NM_001110496 211499 Mm.260712 NM_173734 ENSMUSG00000033808 Tmem87a A930025J12Rik transmembrane protein 87A protein-coding common_peak2_509_4637_0.243101570546129_12.3008378899191_15.8861147056458 chr11 22855966 22861144 + 15.8861147056458 NA intron (NM_001169114, intron 1 of 1) intron (NM_001169114, intron 1 of 1) 1180 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak1_59_194_1.02793843003445_8.12129952876684_15.883335340564 chr18 84851239 84852002 + 15.883335340564 NA intron (NM_025797, intron 1 of 4) intron (NM_025797, intron 1 of 4) 206 NM_025797 109672 Mm.31018 NM_025797 ENSMUSG00000024646 Cyb5a 0610009N12Rik|Cyb5 cytochrome b5 type A (microsomal) protein-coding common_peak2_253_2949_-0.337676233776167_11.3576611222485_15.8825229742574 chr13 23682891 23686102 + 15.8825229742574 NA promoter-TSS (NM_178189) promoter-TSS (NM_178189) 297 NM_023422 68024 Mm.261676 NM_023422 ENSMUSG00000018102 Hist1h2bc 2610022J01Rik|H2bfs|R74621 histone cluster 1, H2bc protein-coding common_peak1_76_855_-0.66474544562808_9.40909426358711_15.8805127284936 chr12 3462865 3464494 + 15.8805127284936 NA intron (NM_172421, intron 4 of 10) intron (NM_172421, intron 4 of 10) 36822 NM_172421 75302 Mm.120475 NM_172421 ENSMUSG00000037486 Asxl2 4930556B16Rik|mKIAA1685 additional sex combs like 2 (Drosophila) protein-coding common_peak2_40_475_-0.933374498242517_8.42813051418668_15.8791269283024 chr5 137706488 137708228 + 15.8791269283024 NA Intergenic ID4_|SINE|ID -22605 NM_178162 231801 Mm.260869 NM_145566 ENSMUSG00000029722 Agfg2 A630095P14Rik|Hrbl|RAB-R|RABR ArfGAP with FG repeats 2 protein-coding common_peak1_52_599_-0.813076925052769_8.8222802279695_15.8769533837287 chr19 11037559 11038742 + 15.8769533837287 NA Intergenic L1_Mus3|LINE|L1 12416 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA common_peak1_140_766_0.56418283607637_9.86517418554112_15.8766213529377 chr10 59907180 59908738 + 15.8766213529377 NA Intergenic Intergenic 28368 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_136_734_0.574737116811132_9.80896899812929_15.8753932249848 chr16 87698528 87700491 + 15.8753932249848 NA intron (NM_007520, intron 1 of 4) CpG 555 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak1_47_547_-0.857644303682076_8.66920993111949_15.8740315747139 chr11 77793315 77794146 + 15.8740315747139 NA intron (NM_011586, intron 1 of 39) intron (NM_011586, intron 1 of 39) -7568 NM_001291214 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak1_62_211_0.993688705388584_8.22476480725749_15.8699211836179 chr2 125122961 125123899 + 15.8699211836179 NA exon (NM_001162418, exon 1 of 15) exon (NM_001162418, exon 1 of 15) 230 NM_001162417 17876 Mm.18535 NM_010852 ENSMUSG00000027201 Myef2 9430071B01|mKIAA1341 myelin basic protein expression factor 2, repressor protein-coding common_peak1_54_620_-0.797158439834567_8.8798702383032_15.8657476471029 chr1 87829205 87829871 + 15.8657476471029 NA intron (NM_009118, intron 10 of 15) MTEa|LTR|ERVL-MaLR -23749 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding unique_peak2_20_273_-1.32055743916203_7.43775336337951_15.8559859145174 chr1 179548701 179550222 + 15.8559859145174 NA intron (NM_146105, intron 1 of 10) intron (NM_146105, intron 1 of 10) 2932 NM_146105 226744 Mm.87662 NM_146105 ENSMUSG00000038949 Cnst 9630058J23Rik consortin, connexin sorting protein protein-coding common_peak1_102_1141_-0.565799051586104_9.87444740956979_15.8541501790141 chr17 34981271 34982684 + 15.8541501790141 NA promoter-TSS (NM_030597) promoter-TSS (NM_030597) 123 NM_001204274 27756 Mm.165735 NM_030597 ENSMUSG00000007050 Lsm2 D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_588_5617_0.221401480625055_12.5665416494389_15.8521086196331 chr12 16524909 16534039 + 15.8521086196331 NA Intergenic MTD|LTR|ERVL-MaLR 60296 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak1_16_233_-1.46682845860923_7.13695049027879_15.8512827465376 chr10 127149540 127149911 + 15.8512827465376 NA Intergenic Intergenic -15431 NR_045166 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak2_888_9642_0.170480470682653_13.3205065680982_15.8480683849555 chr12 25092169 25101795 + 15.8480683849555 NA promoter-TSS (NM_010496) promoter-TSS (NM_010496) -890 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak2_164_1855_-0.432555460588372_10.6417032648334_15.8479392187219 chr11 97434458 97436961 + 15.8479392187219 NA Intergenic Intergenic -14451 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_148_1666_-0.458113386878797_10.473981695547_15.8433308993216 chr11 5428301 5431138 + 15.8433308993216 NA intron (NM_001080924, intron 1 of 8) intron (NM_001080924, intron 1 of 8) 15128 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding common_peak1_14_213_-1.5594228649898_6.96175555390625_15.8423476019008 chr17 7398761 7399178 + 15.8423476019008 NA Intergenic LTRIS_Mus|LTR|ERV1 -13664 NM_001142539 667055 Mm.327371 NM_001142539 ENSMUSG00000056133 Gm9992 ENSMUSG00000056133 predicted gene 9992 protein-coding common_peak1_14_213_-1.5594228649898_6.96175555390625_15.8423476019008-2 chr17 21476352 21476690 + 15.8423476019008 NA Intergenic MMVL30-int|LTR|ERV1 -12467 NM_013843 24132 Mm.42140 NM_013843 ENSMUSG00000057409 Zfp53 D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8 zinc finger protein 53 protein-coding common_peak2_404_3403_0.281432348185238_11.8737314957786_15.8414621617589 chr8 86882570 86886046 + 15.8414621617589 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 950 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_134_718_0.580465193278618_9.78008055707861_15.8398030726557 chr12 112692961 112694248 + 15.8398030726557 NA Intergenic CpG 14764 NM_001100460 382639 Mm.11350 NM_001100460 ENSMUSG00000037638 Zbtb42 EG382639|Gm5188|simiRP58 zinc finger and BTB domain containing 42 protein-coding common_peak1_407_4984_-0.255870078599033_12.155442749986_15.8381106973031 chr4 133812857 133815896 + 15.8381106973031 NA Intergenic CpG 60355 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak1_283_3332_-0.31622143389052_11.544494885165_15.8355554845784 chr19 57116855 57119642 + 15.8355554845784 NA intron (NM_001290813, intron 6 of 20) intron (NM_001290813, intron 6 of 20) 776 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_297_2238_0.342898500441379_11.3000880630733_15.8347846389255 chr1 43518786 43522710 + 15.8347846389255 NA intron (NM_010879, intron 2 of 4) intron (NM_010879, intron 2 of 4) 74997 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak2_314_2416_0.330712989064519_11.4043582522978_15.8320461121765 chr7 106548444 106553155 + 15.8320461121765 NA Intergenic Intergenic 93846 NM_001277179 434223 Mm.276443 NM_001277179 Gm1966 - predicted gene 1966 protein-coding common_peak1_144_1620_-0.465899474126651_10.4297186384542_15.8269406459143 chr5 122501185 122502341 + 15.8269406459143 NA non-coding (NR_027838, exon 1 of 21) non-coding (NR_027838, exon 1 of 21) 462 NM_001110140 11938 Mm.227583 NM_009722 ENSMUSG00000029467 Atp2a2 9530097L16Rik|D5Wsu150e|SERCA2|SERCA2B|Serca2a|mKIAA4195 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 protein-coding common_peak1_363_2945_0.301027950056911_11.6750556900643_15.8259029462168 chr13 101697489 101702722 + 15.8259029462168 NA intron (NM_001077495, intron 7 of 15) intron (NM_001077495, intron 7 of 15) -7475 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_43_506_-0.899431883123034_8.53612599544183_15.8231435825038 chr1 85649990 85650519 + 15.8231435825038 NA intron (NM_013673, intron 1 of 19) intron (NM_013673, intron 1 of 19) 266 NM_001313714 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding common_peak2_72_272_0.889561885465776_8.53753808365274_15.8231435825038 chr5 113034975 113036667 + 15.8231435825038 NA Intergenic Intergenic -20283 NM_177078 320129 Mm.285619 NM_177078 ENSMUSG00000042249 Grk3 4833444A01Rik|AI851927|AW551196|Adrbk-2|Adrbk2|Bark-2 G protein-coupled receptor kinase 3 protein-coding common_peak1_53_609_-0.803845554424298_8.8507426552381_15.8176133666875 chr11 93967317 93968297 + 15.8176133666875 NA intron (NM_008704, intron 1 of 4) intron (NM_008704, intron 1 of 4) 714 NM_008704 18102 Mm.439702 NM_008704 ENSMUSG00000037601 Nme1 AL024257|NDPK-A|NM23-M1|NM23A NME/NM23 nucleoside diphosphate kinase 1 protein-coding common_peak2_150_1689_-0.454287146183995_10.4956639580776_15.8170506036194 chr12 83986696 83988950 + 15.8170506036194 NA promoter-TSS (NM_134188) promoter-TSS (NM_134188) -38 NM_134188 171210 Mm.371675 NM_134188 ENSMUSG00000021226 Acot2 AA571646|MTE-I|Mte1 acyl-CoA thioesterase 2 protein-coding common_peak1_128_671_0.597544263628473_9.691089554593_15.811200247383 chr11 95840726 95842613 + 15.811200247383 NA promoter-TSS (NM_001284393) promoter-TSS (NM_001284393) -626 NM_023121 14710 Mm.46299 NM_023121 ENSMUSG00000038811 Gngt2 AV096488 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 protein-coding common_peak2_81_908_-0.640080907942325_9.50809603022294_15.8083050238961 chr11 95258213 95260393 + 15.8083050238961 NA Intergenic CpG -2226 NM_053093 93670 Mm.40085 NM_053093 ENSMUSG00000020872 Tac4 AW489379|PPT-C tachykinin 4 protein-coding common_peak1_289_2156_0.348570751416791_11.2490958368688_15.8078926241316 chr18 34220390 34222279 + 15.8078926241316 NA intron (NM_007462, intron 1 of 15) CpG 350 NM_007462 11789 Mm.384171 NM_007462 ENSMUSG00000005871 Apc AI047805|AU020952|AW124434|CC1|Min|mAPC adenomatosis polyposis coli protein-coding common_peak2_56_177_1.06876528858378_8.01011607525828_15.8067107997 chr13 35188688 35189918 + 15.8067107997 NA Intergenic Intergenic 7680 NR_045616 100503727 Mm.32214 NR_045616 ENSMUSG00000102099 1700011B04Rik - RIKEN cDNA 1700011B04 gene ncRNA common_peak1_229_1559_0.405848388408574_10.8102545079539_15.8064511133576 chr11 54437772 54439348 + 15.8064511133576 NA intron (NM_173753, intron 1 of 17) CpG 381 NM_173753 216742 Mm.34087 NM_173753 ENSMUSG00000035992 Fnip1 A730024A03Rik|AI838773|AW557298 folliculin interacting protein 1 protein-coding common_peak2_115_571_0.642016600106892_9.48087963683184_15.8063779220292 chr8 95080016 95080919 + 15.8063779220292 NA promoter-TSS (NM_028805) promoter-TSS (NM_028805) -734 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding common_peak2_446_3889_0.263505078387352_12.0573069790672_15.7976732693856 chr4 119124123 119128796 + 15.7976732693856 NA intron (NM_011400, intron 2 of 9) intron (NM_011400, intron 2 of 9) 17714 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding unique_peak2_48_557_-0.847245074918503_8.70049877436994_15.794947524853 chr4 132463227 132464820 + 15.794947524853 NA promoter-TSS (NM_026039) promoter-TSS (NM_026039) -102 NM_026039 67219 Mm.45929 NM_026039 ENSMUSG00000066042 Med18 2810046C01Rik mediator complex subunit 18 protein-coding common_peak2_344_2738_0.311267356419735_11.5750672289152_15.7907623286917 chr5 143524826 143528820 + 15.7907623286917 NA intron (NM_009007, intron 1 of 5) intron (NM_009007, intron 1 of 5) 1170 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e RAS-related C3 botulinum substrate 1 protein-coding common_peak2_101_1128_-0.566546682459188_9.85755642954341_15.7892644761128 chr8 123013204 123017039 + 15.7892644761128 NA intron (NR_037865, intron 1 of 13) intron (NR_037865, intron 1 of 13) 27163 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_113_556_0.649577513396499_9.44632227403828_15.7859664622109 chr10 112928164 112929470 + 15.7859664622109 NA 5' UTR (NM_001033474, exon 1 of 1) 5' UTR (NM_001033474, exon 1 of 1) 209 NM_001033474 382423 Mm.431239 NM_001033474 ENSMUSG00000074748 Atxn7l3b 4921506J03Rik|6230409E21Rik|AI315132|ENSMUSG00000074747 ataxin 7-like 3B protein-coding common_peak2_160_933_0.514718173649317_10.1246378265343_15.7848843150065 chr12 98571746 98575641 + 15.7848843150065 NA intron (NM_029911, intron 1 of 6) intron (NM_029911, intron 1 of 6) 1019 NM_001316666 72258 Mm.196158 NM_029911 ENSMUSG00000033854 Kcnk10 1700024D23Rik|3010005K24Rik|Trek2 potassium channel, subfamily K, member 10 protein-coding common_peak2_148_1665_-0.457247683257927_10.4735488437366_15.7799225047608 chr16 46008691 46011881 + 15.7799225047608 NA 5' UTR (NM_001134480, exon 1 of 4) 5' UTR (NM_001134480, exon 1 of 4) 127 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding common_peak2_95_1062_-0.586925791066298_9.76046298599796_15.7792240885382 chr2 126706673 126708828 + 15.7792240885382 NA intron (NM_001252580, intron 1 of 18) intron (NM_001252580, intron 1 of 18) 422 NM_019729 84092 Mm.272629 NM_019729 ENSMUSG00000027363 Usp8 AI574262|AW557536|Ubpy|mKIAA0055 ubiquitin specific peptidase 8 protein-coding common_peak2_203_1315_0.438951625764927_10.5814195866177_15.7730992302455 chr2 166973083 166978577 + 15.7730992302455 NA intron (NM_001291160, intron 1 of 11) B1_Mur3|SINE|Alu -11113 NR_111895 20853 Mm.73276 NM_011490 ENSMUSG00000039536 Stau1 5830401L18Rik|AW549911|C85792|Stau staufen (RNA binding protein) homolog 1 (Drosophila) protein-coding common_peak1_58_189_1.03567079671088_8.08769100668639_15.7729868160014 chr5 110269176 110269874 + 15.7729868160014 NA intron (NM_001163538, intron 1 of 5) CpG 374 NM_001163538 72542 Mm.61682 NM_028273 ENSMUSG00000029500 Pgam5 2610528A17Rik phosphoglycerate mutase family member 5 protein-coding common_peak2_150_849_0.537201353960487_9.99991970800531_15.7687136143811 chr4 6989020 6991406 + 15.7687136143811 NA intron (NM_145711, intron 1 of 8) CpG 510 NM_145711 252838 Mm.435828 NM_145711 ENSMUSG00000041272 Tox 1700007F02Rik thymocyte selection-associated high mobility group box protein-coding common_peak1_47_546_-0.855009243514106_8.66789240103551_15.7640632948726 chr9 21509785 21510612 + 15.7640632948726 NA promoter-TSS (NM_010744) promoter-TSS (NM_010744) -12 NM_010744 17083 Mm.196618 NM_010744 ENSMUSG00000032180 Tmed1 Il1rl1l|Ly84l|St2l transmembrane p24 trafficking protein 1 protein-coding common_peak1_144_1619_-0.465009196381098_10.4292734995814_15.7626783781809 chr7 90301940 90303682 + 15.7626783781809 NA intron (NM_001289583, intron 1 of 19) intron (NM_001289583, intron 1 of 19) 456 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_54_619_-0.794833386888323_8.87870771183008_15.7623486165245 chr11 63974668 63975363 + 15.7623486165245 NA intron (NM_178379, intron 6 of 6) MIR|SINE|MIR 10789 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak1_247_2871_-0.341320895529677_11.3171795860582_15.7549540594631 chr10 91170711 91172513 + 15.7549540594631 NA promoter-TSS (NM_001080129) promoter-TSS (NM_001080129) 7 NM_001080132 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak1_365_4411_-0.27195079720477_11.971241676989_15.7529051066222 chr4 6451493 6454594 + 15.7529051066222 NA intron (NM_010945, intron 1 of 30) intron (NM_010945, intron 1 of 30) 1228 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding common_peak2_110_534_0.660523086076186_9.3936566243266_15.751643162515 chr9 106684671 106686510 + 15.751643162515 NA 5' UTR (NM_011573, exon 1 of 6) 5' UTR (NM_011573, exon 1 of 6) 226 NM_011573 21767 Mm.22266 NM_011573 ENSMUSG00000040813 Tex264 TEG-264 testis expressed gene 264 protein-coding common_peak2_70_260_0.905253549277132_8.48053277120845_15.7507178749484 chr7 101835975 101837223 + 15.7507178749484 NA exon (NM_001122739, exon 2 of 29) exon (NM_001122739, exon 2 of 29) 1225 NM_001122739 16332 Mm.476000 NM_010567 ENSMUSG00000032737 Inppl1 51C|SHIP2 inositol polyphosphate phosphatase-like 1 protein-coding common_peak1_58_662_-0.767338655070763_8.98919573257721_15.7472128953466 chr7 126775943 126776796 + 15.7472128953466 NA promoter-TSS (NM_026875) promoter-TSS (NM_026875) -606 NM_026875 66090 Mm.27114 NM_025347 ENSMUSG00000042675 Ypel3 0610043B10Rik|1190001G19Rik|Suap yippee-like 3 (Drosophila) protein-coding common_peak1_388_3225_0.287587290831436_11.7993243685714_15.7378505466204 chr11 109649229 109652236 + 15.7378505466204 NA promoter-TSS (NM_021880) promoter-TSS (NM_021880) -189 NM_021880 19084 Mm.30039 NM_021880 ENSMUSG00000020612 Prkar1a 1300018C22Rik|RIalpha|Tse-1|Tse1 protein kinase, cAMP dependent regulatory, type I, alpha protein-coding common_peak2_88_984_-0.610961545579551_9.63849914155396_15.7326393899155 chr16 55933544 55935122 + 15.7326393899155 NA intron (NM_001159364, intron 1 of 3) CpG 515 NM_001159364 74201 Mm.178427 NM_028815 ENSMUSG00000022604 Cep97 2810403B08Rik|4932439K18Rik|AA437768|E130116N02Rik|Lrriq2 centrosomal protein 97 protein-coding common_peak1_71_266_0.897214052557825_8.50930295796647_15.728334772038 chr15 5143416 5144531 + 15.728334772038 NA exon (NM_001013367, exon 1 of 9) exon (NM_001013367, exon 1 of 9) 112 NM_001013367 105787 Mm.207004 NM_001013367 ENSMUSG00000050697 Prkaa1 AI194361|AI450832|AL024255|AMPKalpha1|C130083N04Rik protein kinase, AMP-activated, alpha 1 catalytic subunit protein-coding common_peak1_24_312_-1.20400365479623_7.6880170195345_15.7274426540629 chr7 132797682 132798290 + 15.7274426540629 NA intron (NM_212473, intron 1 of 4) intron (NM_212473, intron 1 of 4) -11051 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding unique_peak1_19_16_2.60367138638044_5.38929853444056_15.7216649410941-2 chr5 21395497 21396036 + 15.7216649410941 NA intron (NM_029195, intron 2 of 18) intron (NM_029195, intron 2 of 18) 23093 NM_008013 14190 Mm.292100 NM_008013 ENSMUSG00000039899 Fgl2 AI385601|musfiblp fibrinogen-like protein 2 protein-coding unique_peak1_19_16_2.60367138638044_5.38929853444056_15.7216649410941 chr10 88422315 88422756 + 15.7216649410941 NA intron (NM_001004164, intron 7 of 20) intron (NM_001004164, intron 7 of 20) -37052 NM_011517 20962 Mm.297977 NM_011517 ENSMUSG00000020059 Sycp3 Cor1|Scp3 synaptonemal complex protein 3 protein-coding common_peak2_288_2147_0.348490225583188_11.243023390777_15.7168296665187 chr8 78507877 78510425 + 15.7168296665187 NA promoter-TSS (NM_029736) promoter-TSS (NM_029736) -177 NM_001282109 76775 Mm.334631 NM_029736 ENSMUSG00000031684 Slc10a7 2410193C02Rik|P7 solute carrier family 10 (sodium/bile acid cotransporter family), member 7 protein-coding unique_peak2_0_66_-4.67628517207803_3.72794660441876_15.7127759455303 chr7 45589099 45589692 + 15.7127759455303 NA 3' UTR (NM_009737, exon 11 of 11) 3' UTR (NM_009737, exon 11 of 11) -14219 NR_038165 71661 Mm.439894 NR_038165 ENSMUSG00000109644 0610005C13Rik AI182092 RIKEN cDNA 0610005C13 gene ncRNA unique_peak1_16_9_3.08160816608681_4.86273217793077_15.7126226203753 chr2 130499823 130500233 + 15.7126226203753 NA intron (NM_008980, intron 1 of 21) intron (NM_008980, intron 1 of 21) 49750 NM_001163688 19262 Mm.224246 NM_008980 ENSMUSG00000027303 Ptpra Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha protein tyrosine phosphatase, receptor type, A protein-coding common_peak1_55_629_-0.786030957182998_8.90619253979578_15.7109311064194 chr10 80030178 80031126 + 15.7109311064194 NA intron (NM_001142701, intron 22 of 22) (TG)n|Simple_repeat|Simple_repeat 9007 NM_025554 66420 Mm.18579 NM_025554 ENSMUSG00000004667 Polr2e 2410021N14Rik|25kDa|AW208866|RPB5|XAP4 polymerase (RNA) II (DNA directed) polypeptide E protein-coding common_peak2_55_172_1.07854883356756_7.9739026444205_15.7057346412721 chr7 99429146 99429868 + 15.7057346412721 NA intron (NM_201352, intron 4 of 17) intron (NM_201352, intron 4 of 17) -36497 NM_028145 72184 Mm.153585 NM_028145 ENSMUSG00000035298 Klhl35 2810406K13Rik kelch-like 35 protein-coding common_peak1_163_1841_-0.432389458653198_10.6308626167647_15.7042510934647 chr5 31179132 31180875 + 15.7042510934647 NA 5' UTR (NM_027901, exon 1 of 19) 5' UTR (NM_027901, exon 1 of 19) 141 NM_027901 71752 Mm.271923 NM_027901 ENSMUSG00000101678 Gtf3c2 1300004C11Rik|2610510G03Rik|AI225816|AU041069|TFIIIC110|mKIAA0011 general transcription factor IIIC, polypeptide 2, beta protein-coding common_peak2_76_853_-0.661370718847424_9.40740690019678_15.7040626673086 chr3 131117076 131119210 + 15.7040626673086 NA intron (NM_001276402, intron 3 of 9) intron (NM_001276402, intron 3 of 9) 5352 NM_001276403 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_235_1618_0.397863757111972_10.8598191488586_15.7036417285073 chr4 120950762 120952628 + 15.7036417285073 NA promoter-TSS (NM_001005788) promoter-TSS (NM_001005788) 6 NM_001005788 381549 Mm.331840 NM_001005788 ENSMUSG00000064141 Zfp69 Gm1029|Krab2|Zfp63 zinc finger protein 69 protein-coding common_peak1_13_202_-1.60538347835361_6.86264417800837_15.7027239178007 chr3 145923749 145924108 + 15.7027239178007 NA promoter-TSS (NM_009740) promoter-TSS (NM_009740) -334 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak1_19_261_-1.34228877390667_7.36227861458411_15.7004513290209 chr9 100456419 100456872 + 15.7004513290209 NA Intergenic MTC|LTR|ERVL-MaLR 29828 NM_001033543 213208 Mm.242896 NM_001033543 ENSMUSG00000044244 Il20rb AV228068|Fndc6|Gm186|Il20R2 interleukin 20 receptor beta protein-coding unique_peak2_10_172_-1.80144279612913_6.53390682957216_15.6987217899254 chr13 29978872 29980006 + 15.6987217899254 NA intron (NM_010093, intron 1 of 6) intron (NM_010093, intron 1 of 6) 4952 NM_001289920 13557 Mm.268356 NM_010093 ENSMUSG00000016477 E2f3 E2F3b|E2f3a E2F transcription factor 3 protein-coding common_peak1_46_536_-0.865647190559395_8.63595468270572_15.698327616719 chr15 81301534 81302376 + 15.698327616719 NA Intergenic Intergenic -50093 NR_077230 78102 Mm.296832 NR_077229 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA common_peak2_171_1029_0.490523170556083_10.2536902073486_15.6980989176258 chr2 181600339 181602206 + 15.6980989176258 NA promoter-TSS (NM_133701) promoter-TSS (NM_133701) -47 NM_133701 68879 Mm.292001 NM_133701 ENSMUSG00000002455 Prpf6 1190003A07Rik|2610031L17Rik|ANT-1|U5-102K pre-mRNA splicing factor 6 protein-coding common_peak1_441_3833_0.26451886556721_12.0368940544518_15.6978575761182 chr2 29621676 29626623 + 15.6978575761182 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 4429 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_554_5195_0.228838038795136_12.4576047348454_15.6975128492855 chr8 120783077 120786871 + 15.6975128492855 NA Intergenic Intergenic 46335 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_42_494_-0.905557544713021_8.49850594261046_15.697058301782 chr19 40707604 40708445 + 15.697058301782 NA intron (NM_009848, intron 1 of 9) ID_B1|SINE|B4 48254 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding unique_peak2_5_121_-2.3701864918435_5.74564409164114_15.6941186522389 chrX 140956838 140957442 + 15.6941186522389 NA promoter-TSS (NM_001164177) promoter-TSS (NM_001164177) -429 NM_001164177 53380 Mm.17640 NM_016883 ENSMUSG00000031429 Psmd10 AW554874 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 protein-coding common_peak2_377_3103_0.292443145104293_11.7461344147393_15.6928210043345 chr17 15703687 15706941 + 15.6928210043345 NA intron (NM_007690, intron 1 of 35) intron (NM_007690, intron 1 of 35) 347 NM_007690 12648 Mm.8137 NM_007690 ENSMUSG00000023852 Chd1 4930525N21Rik|AI851787|AW555109 chromodomain helicase DNA binding protein 1 protein-coding common_peak2_151_859_0.532008287366498_10.0141969932727_15.6928013100916 chr14 25485900 25490101 + 15.6928013100916 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 28815 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_216_2482_-0.367650232177064_11.0940434300883_15.6877167254832 chr12 71014515 71017943 + 15.6877167254832 NA promoter-TSS (NR_045056) promoter-TSS (NR_045056) 262 NM_001081195 238247 Mm.241601 NM_001081195 ENSMUSG00000048118 Arid4a A630009N03|A630067N03Rik|MmRBBP1|Rbbp1 AT rich interactive domain 4A (RBP1-like) protein-coding common_peak1_446_3892_0.262392888913624_12.0578630738041_15.6732820949071 chr4 119124119 119128853 + 15.6732820949071 NA intron (NM_011400, intron 2 of 9) intron (NM_011400, intron 2 of 9) 17741 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_202_1307_0.439052598279956_10.5726731246381_15.6699910075567 chr15 77813418 77818441 + 15.6699910075567 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 26246 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_36_433_-0.981767581233068_8.27066744182794_15.6675586935132 chr14 122104949 122105785 + 15.6675586935132 NA non-coding (NR_015586, exon 2 of 4) non-coding (NR_015586, exon 2 of 4) 1607 NR_015586 319727 Mm.215552 NR_015586 A330035P11Rik - RIKEN cDNA A330035P11 gene ncRNA unique_peak2_26_331_-1.15283186450733_7.79862349909326_15.6674539072848 chr4 102579093 102580788 + 15.6674539072848 NA intron (NM_019840, intron 6 of 14) intron (NM_019840, intron 6 of 14) -7618 NM_001177982 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding unique_peak2_23_301_-1.22462927123298_7.62609010370859_15.6670800343037 chr3 116465258 116467022 + 15.6670800343037 NA Intergenic L1MEc|LINE|L1 42035 NM_025517 66368 Mm.251228 NM_025517 ENSMUSG00000000339 Rtca 2310009A18Rik|AI450277|RPC|Rtcd1 RNA 3'-terminal phosphate cyclase protein-coding common_peak1_52_597_-0.808259908754993_8.81987171982061_15.6668224495912 chr6 57534634 57535573 + 15.6668224495912 NA intron (NM_175523, intron 1 of 6) intron (NM_175523, intron 1 of 6) 323 NM_175523 243382 Mm.396893 NM_175523 ENSMUSG00000037826 Ppm1k 2900063A19Rik|A930026L03Rik|PP2Cm protein phosphatase 1K (PP2C domain containing) protein-coding unique_peak2_1_76_-3.6503702111288_4.4416014351305_15.6634942602877 chr17 9093071 9093797 + 15.6634942602877 NA Intergenic Intergenic 74588 NR_027881 67791 Mm.158175 NR_027881 ENSMUSG00000097049 6530411M01Rik - RIKEN cDNA 6530411M01 gene ncRNA common_peak1_32_392_-1.04106555459773_8.09785272495974_15.6622614595949 chr1 93754953 93755615 + 15.6622614595949 NA promoter-TSS (NM_025920) promoter-TSS (NM_025920) 251 NM_174874 66615 Mm.29087 NM_174874 ENSMUSG00000026280 Atg4b 2510009N07Rik|AW048066|Apg4b|Atg4bl|Autl1 autophagy related 4B, cysteine peptidase protein-coding common_peak2_47_545_-0.852369361641401_8.66657246009915_15.6543782867764 chr10 8203426 8205042 + 15.6543782867764 NA TTS (NM_177387) TTS (NM_177387) -248111 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_47_545_-0.852369361641401_8.66657246009915_15.6543782867764 chr12 100159188 100159936 + 15.6543782867764 NA promoter-TSS (NM_001290303) promoter-TSS (NM_001290303) 91 NM_001290303 217827 Mm.224076 NM_183155 ENSMUSG00000021179 Nrde2 6720454P05Rik nrde-2 necessary for RNA interference, domain containing protein-coding common_peak1_21_281_-1.27975360970484_7.49967454754637_15.6537097329577 chr5 124351815 124352323 + 15.6537097329577 NA intron (NM_013812, intron 1 of 3) intron (NM_013812, intron 1 of 3) 2559 NM_013812 13445 Mm.391838 NM_013812 ENSMUSG00000029394 Cdk2ap1 Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein-coding common_peak2_207_2371_-0.376630116346004_11.023573236373_15.6518533221185 chr10 117709147 117711621 + 15.6518533221185 NA intron (NM_001288586, intron 1 of 10) CpG-1528 374 NM_010786 17246 Mm.22670 NM_010786 ENSMUSG00000020184 Mdm2 1700007J15Rik|AA415488|Mdm-2 transformed mouse 3T3 cell double minute 2 protein-coding unique_peak1_15_7_3.29625326312517_4.64812663156258_15.6509693078642-3 chr4 109662058 109662496 + 15.6509693078642 NA intron (NM_001301368, intron 2 of 2) intron (NM_001301368, intron 2 of 2) 3095 NM_007671 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) protein-coding unique_peak1_15_7_3.29625326312517_4.64812663156258_15.6509693078642-2 chr13 43325725 43326134 + 15.6509693078642 NA Intergenic Intergenic -21757 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding unique_peak1_15_7_3.29625326312517_4.64812663156258_15.6509693078642 chr10 127422749 127423150 + 15.6509693078642 NA intron (NM_001168293, intron 1 of 23) intron (NM_001168293, intron 1 of 23) 2082 NM_001168293 71750 Mm.29342 NM_027900 ENSMUSG00000025404 R3hdm2 1300003K24Rik|AU041262|mKIAA1002 R3H domain containing 2 protein-coding common_peak1_590_5648_0.219461347443199_12.573510459057_15.6456321653253 chr11 83555997 83561374 + 15.6456321653253 NA Intergenic Intergenic 19951 NM_011338 20308 Mm.416125 NM_011338 ENSMUSG00000019122 Ccl9 CCF18|MRP-2|Scya10|Scya9 chemokine (C-C motif) ligand 9 protein-coding common_peak2_601_5788_0.216777149476897_12.6074870159673_15.6455560608975 chr1 164066390 164080822 + 15.6455560608975 NA intron (NM_011346, intron 7 of 8) intron (NM_011346, intron 7 of 8) 11530 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak1_122_1363_-0.508050147805463_10.1596028551214_15.6425115420233 chr18 6240598 6241603 + 15.6425115420233 NA exon (NM_008448, exon 1 of 26) exon (NM_008448, exon 1 of 26) 424 NM_008448 16573 Mm.223744 NM_008448 ENSMUSG00000006740 Kif5b AL022807|Khc|Khcs|Kns1|Ukhc kinesin family member 5B protein-coding common_peak2_64_724_-0.7249226645694_9.1393758526176_15.6223530367137 chr9 21308589 21310486 + 15.6223530367137 NA intron (NM_009678, intron 2 of 10) intron (NM_009678, intron 2 of 10) 2796 NM_009678 11768 Mm.22239 NM_009678 ENSMUSG00000003309 Ap1m2 D9Ertd818e|[m]1B|mu1B adaptor protein complex AP-1, mu 2 subunit protein-coding common_peak1_248_1746_0.382976492404872_10.9621521391192_15.6186685408684 chr18 11656663 11658494 + 15.6186685408684 NA non-coding (NR_045526, exon 1 of 18) non-coding (NR_045526, exon 1 of 18) 229 NM_001081223 225182 Mm.154275 NM_175458 ENSMUSG00000041238 Rbbp8 9930104E21Rik|CtIP|RBBP-8|RIM|SAE2 retinoblastoma binding protein 8 protein-coding common_peak2_351_2817_0.305791091129739_11.6133514418745_15.6180406181441 chr15 100613861 100616738 + 15.6180406181441 NA promoter-TSS (NM_011873) promoter-TSS (NM_011873) -189 NR_045701 78445 Mm.44383 NR_045701 ENSMUSG00000097093 C330013E15Rik - RIKEN cDNA C330013E15 gene ncRNA common_peak2_220_1476_0.414087065284216_10.7354976434069_15.6157201529646 chr11 100848920 100851481 + 15.6157201529646 NA intron (NM_001113563, intron 1 of 18) CpG 385 NM_001113563 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding common_peak1_164_1851_-0.429442848721035_10.6401469588997_15.6080518891363 chr12 16531371 16533461 + 15.6080518891363 NA Intergenic Intergenic 57354 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding unique_peak1_26_38_1.93680534797735_6.25380489285092_15.5957894273707 chr6 85374318 85374719 + 15.5957894273707 NA exon (NM_177466, exon 1 of 5) exon (NM_177466, exon 1 of 5) 116 NM_177466 52055 Mm.220334 NM_177466 ENSMUSG00000051343 Rab11fip5 9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11 RAB11 family interacting protein 5 (class I) protein-coding unique_peak1_26_38_1.93680534797735_6.25380489285092_15.5957894273707-2 chr6 116107531 116108095 + 15.5957894273707 NA intron (NM_177412, intron 3 of 5) intron (NM_177412, intron 3 of 5) 85561 NM_177412 330401 Mm.425352 NM_177412 ENSMUSG00000030126 Tmcc1 3632431M01Rik|mKIAA0779 transmembrane and coiled coil domains 1 protein-coding common_peak2_244_1707_0.386889564168515_10.9315370417047_15.5952380803579 chr9 88729096 88734086 + 15.5952380803579 NA exon (NM_007536, exon 1 of 2) exon (NM_007536, exon 1 of 2) 259 NM_007536 12047 Mm.378888 NM_007536 ENSMUSG00000099974 Bcl2a1d A1-d B cell leukemia/lymphoma 2 related protein A1d protein-coding common_peak1_31_57_1.66488457918395_6.69042328471955_15.5944978972269 chr18 56431993 56432444 + 15.5944978972269 NA promoter-TSS (NM_026240) promoter-TSS (NM_026240) 86 NM_026240 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|NS3TP2 GRAM domain containing 3 protein-coding unique_peak1_23_28_2.15579447296452_5.93587823160983_15.5929913928446-4 chr6 57814264 57814918 + 15.5929913928446 NA intron (NM_146168, intron 1 of 4) intron (NM_146168, intron 1 of 4) 10534 NM_146168 232023 Mm.24642 NM_146168 ENSMUSG00000037788 Vopp1 AW146242|Ecop vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding unique_peak1_23_28_2.15579447296452_5.93587823160983_15.5929913928446-3 chr5 92349419 92349924 + 15.5929913928446 NA promoter-TSS (NM_021274) promoter-TSS (NM_021274) -782 NM_021274 15945 Mm.877 NM_021274 ENSMUSG00000034855 Cxcl10 C7|CRG-2|INP10|IP-10|IP10|Ifi10|Scyb10|gIP-10|mob-1 chemokine (C-X-C motif) ligand 10 protein-coding unique_peak1_23_28_2.15579447296452_5.93587823160983_15.5929913928446-2 chr4 125114784 125115235 + 15.5929913928446 NA Intergenic Intergenic 12872 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding unique_peak1_23_28_2.15579447296452_5.93587823160983_15.5929913928446 chr1 185229404 185229966 + 15.5929913928446 NA intron (NM_001163754, intron 2 of 34) intron (NM_001163754, intron 2 of 34) -13241 NR_034044 100217449 Mm.429560 NR_034044 ENSMUSG00000077571 Snora36b MBI-87 small nucleolar RNA, H/ACA box 36B snoRNA common_peak1_78_873_-0.649390378387283_9.44679428030696_15.5901686868482 chr10 127075144 127076112 + 15.5901686868482 NA Intergenic Intergenic -3279 NM_001301014 216439 Mm.336761 NM_001033263 ENSMUSG00000025422 Agap2 AGAP-2|Centg1|PIKE|cnt-g1|mKIAA0167 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_32_61_1.623123637274_6.76575812902388_15.5901457060109 chr2 128312099 128312626 + 15.5901457060109 NA intron (NR_028589, intron 2 of 2) intron (NR_028589, intron 2 of 2) 116989 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_256_2981_-0.332462893126767_11.3758330957201_15.5892621996149 chr3 95667397 95670342 + 15.5892621996149 NA Intergenic Intergenic 10148 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak2_129_1443_-0.492328195367918_10.2496909292032_15.5878060766397 chrX 160135782 160139034 + 15.5878060766397 NA intron (NM_008810, intron 1 of 10) intron (NM_008810, intron 1 of 10) 1022 NM_008810 18597 Mm.34775 NM_008810 ENSMUSG00000031299 Pdha1 Pdha-1 pyruvate dehydrogenase E1 alpha 1 protein-coding common_peak1_48_555_-0.842064835812822_8.69790865481709_15.5777740096535 chr2 6708038 6709047 + 15.5777740096535 NA intron (NM_001310447, intron 1 of 11) intron (NM_001310447, intron 1 of 11) 13120 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_156_902_0.518893456924792_10.0780289059433_15.5775415424801 chr10 18055037 18056419 + 15.5775415424801 NA promoter-TSS (NM_001111065) promoter-TSS (NM_001111065) -212 NM_009048 19707 Mm.4479 NM_009048 ENSMUSG00000019854 Reps1 BB161292 RalBP1 associated Eps domain containing protein protein-coding common_peak1_193_1226_0.45103114088686_10.4864351041063_15.5774248228768 chr1 14308757 14310779 + 15.5774248228768 NA 5' UTR (NM_010164, exon 1 of 18) 5' UTR (NM_010164, exon 1 of 18) 431 NM_001310459 14048 Mm.250185 NM_010164 ENSMUSG00000025932 Eya1 bor EYA transcriptional coactivator and phosphatase 1 protein-coding common_peak2_87_971_-0.611790138539117_9.61891743433622_15.5773168620517 chr3 139041467 139043757 + 15.5773168620517 NA intron (NM_145544, intron 2 of 13) intron (NM_145544, intron 2 of 13) 32589 NM_145544 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding common_peak2_206_2357_-0.376618166579684_11.0150389196899_15.5740015494099 chr8 107501940 107506175 + 15.5740015494099 NA intron (NM_025830, intron 6 of 23) intron (NM_025830, intron 6 of 23) -47187 NR_029553 387158 NR_029553 ENSMUSG00000065439 Mir140 Mirn140|mir-140|mmu-mir-140 microRNA 140 ncRNA common_peak1_172_1039_0.486842718464095_10.2657891722605_15.5735458118187 chr9 72132664 72134064 + 15.5735458118187 NA Intergenic CpG -21545 NM_001253865 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding common_peak1_187_2126_-0.398248608161941_10.8554800138797_15.5692107503968 chr4 45407684 45409597 + 15.5692107503968 NA intron (NM_001009949, intron 1 of 2) CpG 126 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak2_88_982_-0.608029237576392_9.63703298755238_15.5687812592247 chr11 106036156 106037983 + 15.5687812592247 NA 5' UTR (NM_027946, exon 1 of 7) 5' UTR (NM_027946, exon 1 of 7) 197 NM_027946 71833 Mm.307455 NM_027946 ENSMUSG00000049354 Dcaf7 1700012F10Rik|2610037L01Rik|C86529|HAN11|Wdr68 DDB1 and CUL4 associated factor 7 protein-coding common_peak1_289_3404_-0.31005787032219_11.5784101477383_15.5685368383431 chr4 141546065 141547598 + 15.5685368383431 NA non-coding (NR_030695, exon 1 of 1) non-coding (NR_030695, exon 1 of 1) 669 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak2_94_420_0.730793367208816_9.0830731066708_15.5669761317844 chr16 49796257 49798092 + 15.5669761317844 NA Intergenic ERV3-16A3_LTR|LTR|ERVL -58480 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding unique_peak1_25_35_1.98549624319862_6.16267312304162_15.565043722633 chr10 61233431 61234036 + 15.565043722633 NA intron (NM_001081127, intron 4 of 21) intron (NM_001081127, intron 4 of 21) 39705 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak1_89_993_-0.604311092811299_9.65494649515664_15.5615261816396 chr13 101707492 101708984 + 15.5615261816396 NA intron (NM_001077495, intron 4 of 15) intron (NM_001077495, intron 4 of 15) -15608 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_207_1355_0.430116715063656_10.6201998206682_15.5605893834525 chr11 97361696 97364062 + 15.5605893834525 NA exon (NM_138657, exon 1 of 10) exon (NM_138657, exon 1 of 10) 328 NM_138657 192157 Mm.34339 NM_138657 ENSMUSG00000038485 Socs7 2310063P06Rik|C85125|Nap4 suppressor of cytokine signaling 7 protein-coding common_peak1_520_4780_0.237054625297906_12.3416240029966_15.5596803298223 chr8 72166526 72170847 + 15.5596803298223 NA intron (NM_023126, intron 2 of 7) B1_Mur1|SINE|Alu 7486 NM_023126 17274 Mm.162811 NM_023126 ENSMUSG00000003037 Rab8a AA409338|Mel RAB8A, member RAS oncogene family protein-coding common_peak2_54_617_-0.790172009518459_8.87637702314515_15.556321133173 chr14 54398264 54399899 + 15.556321133173 NA intron (NM_011405, intron 4 of 11) intron (NM_011405, intron 4 of 11) 10391 NM_001253680 20540 Mm.142455 NM_011405 ENSMUSG00000000958 Slc7a7 AI790233|my+lat1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 protein-coding common_peak1_172_1945_-0.417085463288563_10.7177532631368_15.5541550266384 chr2 79266201 79268360 + 15.5541550266384 NA intron (NM_010576, intron 2 of 27) B4A|SINE|B4 11854 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_20_271_-1.30998819745184_7.43246874252442_15.5489158055986 chr10 24869969 24870543 + 15.5489158055986 NA intron (NM_001166416, intron 1 of 29) CpG 270 NM_027347 70208 Mm.28020 NM_027347 ENSMUSG00000019984 Med23 130kDa|3000002A17Rik|Crsp3|ESTM7|Sur2|X83317|mKIAA1216 mediator complex subunit 23 protein-coding common_peak1_19_260_-1.33677176893911_7.35952011210033_15.5441181506258 chr1 138149231 138149660 + 15.5441181506258 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 25681 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_130_1453_-0.488724292072721_10.2614494078832_15.5433657234953 chr16 91465086 91466134 + 15.5433657234953 NA non-coding (NR_077219, exon 1 of 2) non-coding (NR_077219, exon 1 of 2) 506 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak2_416_3547_0.273329002644822_11.9294547956235_15.5415926528751 chr1 21330788 21338184 + 15.5415926528751 NA Intergenic Intergenic -15191 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_44_513_-0.879445911629247_8.56590159337926_15.5402237583537 chr9 108854055 108854671 + 15.5402237583537 NA 5' UTR (NM_134420, exon 1 of 18) 5' UTR (NM_134420, exon 1 of 18) 320 NM_134420 171429 Mm.45201 NM_134420 ENSMUSG00000023259 Slc26a6 B930010B04Rik|CFEX|Pat-1|Pat1 solute carrier family 26, member 6 protein-coding common_peak1_31_381_-1.05456325372422_8.05014720117364_15.5344996939963 chr13 24617437 24617921 + 15.5344996939963 NA intron (NM_178658, intron 1 of 13) intron (NM_178658, intron 1 of 13) 3073 NM_178658 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_32_391_-1.03738989645433_8.09601489588804_15.5337956919659 chr9 120577339 120577890 + 15.5337956919659 NA non-coding (NR_073359, exon 1 of 1) non-coding (NR_073359, exon 1 of 1) 283 NR_073359 76100 Mm.48212 NR_073359 ENSMUSG00000052658 5830454E08Rik - RIKEN cDNA 5830454E08 gene ncRNA common_peak1_41_483_-0.91477628228974_8.46147509612972_15.5310310352105 chr6 136553371 136554253 + 15.5310310352105 NA intron (NM_019426, intron 1 of 14) intron (NM_019426, intron 1 of 14) 34961 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding unique_peak2_40_472_-0.924253108273969_8.42356981920241_15.5265917888138 chr6 114935260 114937699 + 15.5265917888138 NA Intergenic Intergenic -14727 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_118_1316_-0.51596726001687_10.1050560002481_15.5261935728921 chr7 25266815 25267966 + 15.5261935728921 NA promoter-TSS (NM_001302811) promoter-TSS (NM_001302811) -309 NM_001302811 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak1_214_2455_-0.368262088237907_11.0779638012512_15.5244584994953 chr7 127111738 127113306 + 15.5244584994953 NA intron (NM_133686, intron 1 of 3) intron (NM_133686, intron 1 of 3) 9507 NM_133686 67375 Mm.26928 NM_133686 ENSMUSG00000030674 Qprt 2410027J01Rik|AI647766|QPRTase quinolinate phosphoribosyltransferase protein-coding common_peak1_157_911_0.515821388134931_10.0908007082322_15.5228778056583 chr1 144005768 144007456 + 15.5228778056583 NA Intergenic Intergenic -2463 NM_009061 19735 Mm.28262 NM_009061 ENSMUSG00000026360 Rgs2 GOS8 regulator of G-protein signaling 2 protein-coding common_peak1_178_1093_0.474147562630211_10.3324708041077_15.5212217352252 chr11 87590896 87591839 + 15.5212217352252 NA promoter-TSS (NM_133215) promoter-TSS (NM_133215) -850 NM_133215 170749 Mm.399376 NM_133215 ENSMUSG00000018401 Mtmr4 AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647 myotubularin related protein 4 protein-coding common_peak1_257_2993_-0.331384508464827_11.382166251826_15.5206736198346 chr2 166468218 166471706 + 15.5206736198346 NA Intergenic Intergenic 22511 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak1_16_231_-1.4544447341534_7.13075862805087_15.5203665588666 chr7 141269937 141270480 + 15.5203665588666 NA intron (NM_028069, intron 12 of 13) intron (NM_028069, intron 12 of 13) -3784 NM_001252600 54123 Mm.3233 NM_016850 ENSMUSG00000025498 Irf7 - interferon regulatory factor 7 protein-coding common_peak1_25_321_-1.17549563347369_7.74316906137777_15.5157737657544 chr6 30347642 30348258 + 15.5157737657544 NA Intergenic ID_B1|SINE|B4 43060 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding common_peak2_72_274_0.879031217973607_8.54280341739883_15.5144522487192 chr7 47050120 47051485 + 15.5144522487192 NA intron (NM_026436, intron 1 of 2) CpG 162 NM_026436 67893 Mm.27338 NM_026436 ENSMUSG00000010307 Tmem86a 1810054O13Rik|AI414959|AW742698 transmembrane protein 86A protein-coding common_peak2_49_141_1.16288038381806_7.73118731141371_15.5134943832867 chr16 92777633 92778715 + 15.5134943832867 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 47900 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_165_1861_-0.42651917720409_10.6493777689568_15.5130511957201 chr11 106386495 106388957 + 15.5130511957201 NA Intergenic PB1D9|SINE|Alu -5085 NM_010494 15896 Mm.394 NM_010494 ENSMUSG00000001029 Icam2 CD102|Icam-2|Ly-60 intercellular adhesion molecule 2 protein-coding common_peak2_72_808_-0.677676866044349_9.3211574594078_15.5086754209163 chr12 51846712 51848965 + 15.5086754209163 NA Intergenic Intergenic -18302 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak1_348_2787_0.306085451395845_11.5980575715663_15.5026403130151 chr1 80756917 80759463 + 15.5026403130151 NA intron (NM_175291, intron 1 of 55) CpG 363 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak2_245_1719_0.383997242815607_10.9401914709973_15.5020881158758 chr2 163418116 163420747 + 15.5020881158758 NA promoter-TSS (NM_025699) promoter-TSS (NM_025699) 39 NM_025699 66680 Mm.25119 NM_025699 ENSMUSG00000035399 Oser1 3230401D17Rik|AI256769|Perit1 oxidative stress responsive serine rich 1 protein-coding common_peak1_14_211_-1.54587633315185_6.95498228798727_15.4973070474824 chr11 5877893 5878173 + 15.4973070474824 NA intron (NM_008894, intron 1 of 10) CpG 223 NM_008894 18972 Mm.35788 NM_008894 ENSMUSG00000020471 Pold2 50kDa|p50|po1D2 polymerase (DNA directed), delta 2, regulatory subunit protein-coding common_peak2_213_1412_0.421036980208189_10.675064240438_15.4972216064599 chr18 38992392 38995241 + 15.4972216064599 NA intron (NM_175164, intron 1 of 22) CpG 671 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak2_115_1282_-0.523417518204401_10.0635966959875_15.4901783294649 chr11 6388316 6390154 + 15.4901783294649 NA Intergenic C-rich|Low_complexity|Low_complexity -5890 NM_001005867 52915 Mm.1144 NM_028601 ENSMUSG00000041164 Zmiz2 Zimp7 zinc finger, MIZ-type containing 2 protein-coding unique_peak2_4_109_-2.5434501082666_5.50963465939136_15.4858000193581 chr10 40376027 40376829 + 15.4858000193581 NA intron (NM_001291816, intron 1 of 11) intron (NM_001291816, intron 1 of 11) 27120 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak1_27_340_-1.12706317900625_7.85009633952105_15.4832654435235 chr5 52866331 52867055 + 15.4832654435235 NA TTS (NM_024213) TTS (NM_024213) 32558 NM_024213 52206 Mm.272568 NM_024213 ENSMUSG00000029176 Anapc4 2610306D21Rik|APC4|D5Ertd249e anaphase promoting complex subunit 4 protein-coding common_peak1_51_586_-0.815183137282764_8.78962512446867_15.4831477502793 chr19 53184814 53185857 + 15.4831477502793 NA intron (NM_013758, intron 1 of 15) intron (NM_013758, intron 1 of 15) 41338 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak1_39_462_-0.937121844443103_8.38630746103868_15.4829061812542 chr8 105808594 105809417 + 15.4829061812542 NA intron (NM_145824, intron 2 of 13) B1F2|SINE|Alu 18345 NM_145824 74334 Mm.4206 NM_145824 ENSMUSG00000037415 Ranbp10 4432417N03Rik RAN binding protein 10 protein-coding common_peak1_79_883_-0.643543709387943_9.46613070469746_15.4828044765953 chr11 67522024 67523440 + 15.4828044765953 NA Intergenic Intergenic -10266 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_114_566_0.639361466029602_9.46688565795703_15.4828044765953 chr12 16999297 17000800 + 15.4828044765953 NA promoter-TSS (NM_172574) promoter-TSS (NM_172574) 70 NM_172574 217430 Mm.379451 NM_172574 ENSMUSG00000045679 Pqlc3 C78076|E030024M05Rik PQ loop repeat containing protein-coding common_peak1_103_1147_-0.556261059662043_9.88677639684467_15.4802064219315 chr7 51724229 51726010 + 15.4802064219315 NA Intergenic Intergenic 103289 NM_080853 140919 Mm.256618 NM_080853 ENSMUSG00000030500 Slc17a6 2900073D12Rik|DNPI|VGLUT2 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 protein-coding common_peak2_342_4096_-0.279939831304144_11.8603822618282_15.4780429465572 chr7 80777113 80785539 + 15.4780429465572 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 22005 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_138_1544_-0.471406341999135_10.3576879517922_15.473158266655 chr17 34101568 34103677 + 15.473158266655 NA Intergenic B3A|SINE|B2 -7313 NR_046183 414076 Mm.473092 NR_046183 ENSMUSG00000098197 BC051537 - cDNA sequence BC051537 ncRNA common_peak1_437_3791_0.26432260482701_12.0209045513118_15.4709664749409 chr17 34999129 35002138 + 15.4709664749409 NA promoter-TSS (NM_011690) promoter-TSS (NM_011690) 113 NM_033075 110956 Mm.22506 NM_033075 D17H6S56E-5 G7e DNA segment, Chr 17, human D6S56E 5 protein-coding common_peak1_48_554_-0.839467724326784_8.69661009907408_15.4696074957549 chr7 128120062 128120970 + 15.4696074957549 NA Intergenic ORR1A3-int|LTR|ERVL-MaLR -9052 NM_021334 16411 Mm.22378 NM_021334 ENSMUSG00000030789 Itgax AI449405|Cd11c|Cr4|N418 integrin alpha X protein-coding common_peak1_98_1091_-0.571302677105688_9.80710580236701_15.4693873367984 chr9 24502417 24504063 + 15.4693873367984 NA promoter-TSS (NM_172920) promoter-TSS (NM_172920) -100 NM_172920 244745 Mm.38526 NM_172920 ENSMUSG00000043067 Dpy19l1 1100001I19Rik|6030402K12|AI225861|AW558481 dpy-19-like 1 (C. elegans) protein-coding common_peak2_39_92_1.3785877277091_7.22845267496258_15.4655273154265 chr11 96821906 96822750 + 15.4655273154265 NA intron (NM_001130450, intron 2 of 4) intron (NM_001130450, intron 2 of 4) 1685 NM_001130453 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak2_335_4003_-0.28330237029207_11.82557507369_15.4617943042864 chr3 88450647 88457203 + 15.4617943042864 NA intron (NM_001163489, intron 2 of 14) intron (NM_001163489, intron 2 of 14) 1836 NM_013658 20351 Mm.439752 NM_013658 ENSMUSG00000028064 Sema4a AI132332|SemB|Semab sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A protein-coding common_peak1_56_637_-0.772913894214696_8.93095566665752_15.4609507580753 chr11 83654237 83655299 + 15.4609507580753 NA Intergenic MLTR18D_MM|LTR|ERVK -5390 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak2_670_6684_0.201189019194107_12.8073063545778_15.4557439224949 chr1 135128608 135136783 + 15.4557439224949 NA promoter-TSS (NM_177081) promoter-TSS (NM_177081) -30 NM_177081 320139 Mm.258388 NM_177081 ENSMUSG00000031506 Ptpn7 BPTP-4|C920001D21Rik|HEPTP|LC-PTP|LPTP protein tyrosine phosphatase, non-receptor type 7 protein-coding common_peak1_54_616_-0.787835660763502_8.87520884876767_15.4536940409502 chrX 57337792 57338610 + 15.4536940409502 NA intron (NM_152801, intron 1 of 21) intron (NM_152801, intron 1 of 21) 528 NM_152801 73341 Mm.261443 NM_152801 ENSMUSG00000031133 Arhgef6 1600028C08Rik|1700038J06Rik|4930592P22Rik|alpha-PIX Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak1_45_523_-0.868349886257585_8.59924805840866_15.450948832023 chr4 107889285 107890357 + 15.450948832023 NA promoter-TSS (NM_028754) promoter-TSS (NM_028754) -78 NM_028754 74098 Mm.274853 NM_028754 ENSMUSG00000028608 0610037L13Rik 1110008H16Rik RIKEN cDNA 0610037L13 gene protein-coding common_peak1_28_350_-1.10666390579199_7.90199526740856_15.4496045093663 chr18 38631754 38632245 + 15.4496045093663 NA Intergenic Intergenic -30731 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty homolog 4 (Drosophila) protein-coding unique_peak1_18_14_2.69347360778837_5.2536273995027_15.447159592368 chr16 16993174 16993549 + 15.447159592368 NA intron (NM_011949, intron 1 of 8) intron (NM_011949, intron 1 of 8) 9979 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding unique_peak1_18_14_2.69347360778837_5.2536273995027_15.447159592368-3 chr8 121851282 121851635 + 15.447159592368 NA Intergenic Intergenic -21889 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding unique_peak1_18_14_2.69347360778837_5.2536273995027_15.447159592368-2 chr5 114680074 114680476 + 15.447159592368 NA intron (NM_019821, intron 1 of 4) PB1D10|SINE|Alu 10660 NM_019821 56356 Mm.275766 NM_019821 ENSMUSG00000011884 Gltp 1110001F24Rik|C76925|C77564 glycolipid transfer protein protein-coding common_peak2_81_332_0.808677209180521_8.78371697166152_15.4457861716518 chr1 135267353 135269207 + 15.4457861716518 NA intron (NM_145417, intron 5 of 10) intron (NM_145417, intron 5 of 10) -9808 NM_007921 13710 Mm.441439 NM_007921 ENSMUSG00000003051 Elf3 ESE-1|ESX|jen E74-like factor 3 protein-coding common_peak1_147_1648_-0.454367409853344_10.4601919785108_15.445508505325 chr7 127027041 127028387 + 15.445508505325 NA TTS (NM_145588) TTS (NM_145588) -1235 NM_010772 17188 Mm.378964 NM_010772 ENSMUSG00000030678 Maz MAZI|PUR1|Pur-1|SAF-1|SAF-2 MYC-associated zinc finger protein (purine-binding transcription factor) protein-coding common_peak2_340_2701_0.310251658536473_11.5549377885939_15.4454368280281 chr9 120052742 120058260 + 15.4454368280281 NA intron (NM_009987, intron 1 of 1) ID_B1|SINE|B4 12795 NM_009987 13051 Mm.44065 NM_009987 ENSMUSG00000052336 Cx3cr1 - chemokine (C-X3-C motif) receptor 1 protein-coding common_peak1_93_414_0.732775872378088_9.06335546242333_15.4443020153866 chr8 61927759 61928919 + 15.4443020153866 NA intron (NM_001293783, intron 1 of 37) intron (NM_001293783, intron 1 of 37) 252 NM_001293783 234311 Mm.275233 NM_144928 ENSMUSG00000037921 Ddx60 9830118M07 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 protein-coding common_peak2_123_1372_-0.503209083040081_10.1715113686271_15.4411211440838 chr7 4914478 4916286 + 15.4411211440838 NA 5' UTR (NM_170759, exon 1 of 3) 5' UTR (NM_170759, exon 1 of 3) 165 NM_170759 232816 Mm.27442 NM_170759 ENSMUSG00000074406 Zfp628 Zec|Znf628 zinc finger protein 628 protein-coding common_peak1_80_326_0.813195257494796_8.75974445424548_15.4399677354613 chr1 133348061 133349719 + 15.4399677354613 NA Intergenic Intergenic -1676 NM_031193 19702 Mm.220955 NM_031193 Ren2 Ren|Ren-2|Ren-B|Rn-2|Rnr renin 2 tandem duplication of Ren1 protein-coding common_peak2_67_754_-0.703571950865559_9.20854685877966_15.439505332096 chr12 86809686 86811688 + 15.439505332096 NA Intergenic Intergenic 74127 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_282_2090_0.350164742853185_11.2050597180162_15.4367423061294 chr3 53462658 53464383 + 15.4367423061294 NA promoter-TSS (NM_172501) promoter-TSS (NM_172501) -262 NM_172501 212114 Mm.85744 NM_172501 ENSMUSG00000042997 Nhlrc3 4833441N19|8030451K01Rik|mKIAA4083 NHL repeat containing 3 protein-coding common_peak2_165_980_0.498008854135465_10.187113753287_15.4358019796634 chr2 30634620 30638095 + 15.4358019796634 NA Intergenic Intergenic 41313 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding common_peak1_132_1475_-0.483576693398035_10.2856886593614_15.4328572059476 chr3 94442865 94444107 + 15.4328572059476 NA exon (NM_030116, exon 1 of 7) exon (NM_030116, exon 1 of 7) 150 NM_030116 78523 Mm.218515 NM_030116 ENSMUSG00000028140 Mrpl9 8030480E20Rik|AA409733|C330013D18Rik|L9mt mitochondrial ribosomal protein L9 protein-coding common_peak1_509_4649_0.239373674309377_12.3027018380374_15.4317155382671 chr13 51752846 51757608 + 15.4317155382671 NA intron (NM_001281880, intron 2 of 16) B1F1|SINE|Alu 38520 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_56_179_1.0526456232205_8.01817590793992_15.4273035057053 chr5 100673669 100674703 + 15.4273035057053 NA promoter-TSS (NM_027978) promoter-TSS (NM_027978) 70 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding common_peak1_36_431_-0.975103850952058_8.26733557668744_15.4230268351835 chr3 79237061 79237834 + 15.4230268351835 NA intron (NR_045502, intron 1 of 2) URR1A|DNA|hAT-Charlie 24528 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak2_86_958_-0.612589174352278_9.59909241784199_15.4220914334528 chr5 31766261 31768297 + 15.4220914334528 NA intron (NM_181279, intron 5 of 13) MTD|LTR|ERVL-MaLR 69229 NM_181282 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Bre 6030405P19Rik|AI429776|B830038C02Rik brain and reproductive organ-expressed protein protein-coding common_peak2_246_1730_0.381979109105085_10.9483795639192_15.417694810641 chr16 44346558 44350612 + 15.417694810641 NA intron (NM_144550, intron 1 of 17) intron (NM_144550, intron 1 of 17) 1184 NM_144550 212514 Mm.24035 NM_144550 ENSMUSG00000043065 Spice1 Ccdc52|D16Ertd480e spindle and centriole associated protein 1 protein-coding common_peak1_87_969_-0.608818572007827_9.61743165107058_15.4132045818065 chr9 14274751 14276028 + 15.4132045818065 NA promoter-TSS (NM_030261) promoter-TSS (NM_030261) -912 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak1_54_168_1.08041158210373_7.94108522733405_15.4126559131246 chr1 144283329 144284318 + 15.4126559131246 NA Intergenic L1_Mus3|LINE|L1 -34719 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak1_271_1979_0.358700790752623_11.1306351103433_15.4123229503031 chr3 139074244 139076290 + 15.4123229503031 NA promoter-TSS (NM_001040690) promoter-TSS (NM_001040690) -66 NM_001040690 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding common_peak1_55_626_-0.779144571597758_8.90274934700316_15.4051922201037 chr10 118099997 118100797 + 15.4051922201037 NA Intergenic Intergenic -41390 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak1_53_605_-0.794354105447001_8.84599693074945_15.4025720648927 chr4 118428116 118428742 + 15.4025720648927 NA intron (NM_019422, intron 1 of 7) intron (NM_019422, intron 1 of 7) 336 NM_019422 54325 Mm.282096 NM_019422 ENSMUSG00000006390 Elovl1 AA407424|BB151133|Ssc1 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 protein-coding common_peak1_99_1101_-0.566668694062063_9.82257416154013_15.3961706663203 chr2 122375647 122376705 + 15.3961706663203 NA Intergenic Intergenic -7258 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding common_peak2_281_2081_0.350123561466241_11.1988161340325_15.395175047877 chr10 89744221 89747853 + 15.395175047877 NA intron (NM_029166, intron 1 of 20) intron (NM_029166, intron 1 of 20) 1046 NM_029166 75089 Mm.268922 NM_029166 ENSMUSG00000019951 Uhrf1bp1l 2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701 UHRF1 (ICBP90) binding protein 1-like protein-coding common_peak2_66_742_-0.706674700388872_9.18388105034416_15.3901199650004 chr19 46395239 46396489 + 15.3901199650004 NA promoter-TSS (NM_016860) promoter-TSS (NM_016860) -129 NM_016860 54130 Mm.3118 NM_016860 ENSMUSG00000025228 Actr1a Arp1|alpha-Arp1 ARP1 actin-related protein 1A, centractin alpha protein-coding common_peak2_135_731_0.567673356249198_9.79953651640864_15.3819975678041 chr12 112692877 112694401 + 15.3819975678041 NA Intergenic CpG 14799 NM_001100460 382639 Mm.11350 NM_001100460 ENSMUSG00000037638 Zbtb42 EG382639|Gm5188|simiRP58 zinc finger and BTB domain containing 42 protein-coding common_peak2_64_226_0.950366033041981_8.30173150381191_15.380014619251 chr15 86082985 86084658 + 15.380014619251 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 25094 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak2_64_226_0.950366033041981_8.30173150381191_15.380014619251-2 chr17 87324935 87326323 + 15.380014619251 NA intron (NM_028639, intron 8 of 19) intron (NM_028639, intron 8 of 19) 42743 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak2_219_1470_0.411934109503798_10.7285485860067_15.3799171475021 chr16 32430142 32432536 + 15.3799171475021 NA 5' UTR (NM_001163160, exon 1 of 9) 5' UTR (NM_001163160, exon 1 of 9) 109 NM_001163160 13026 Mm.98775 NM_009981 ENSMUSG00000005615 Pcyt1a CTalpha|Cctalpha|Ctpct|Cttalpha phosphate cytidylyltransferase 1, choline, alpha isoform protein-coding common_peak1_28_46_1.79407446283493_6.4516260830951_15.3791650674233 chr5 142913398 142913930 + 15.3791650674233 NA Intergenic Lx8|LINE|L1 -6910 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_23_299_-1.21504322240379_7.62129707929399_15.3756929398179 chrX 48141995 48142564 + 15.3756929398179 NA Intergenic Intergenic -4157 NM_001313749 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding common_peak2_70_785_-0.685225956411589_9.27577252405281_15.3721058569012 chr5 74530789 74532482 + 15.3721058569012 NA 5' UTR (NM_178672, exon 1 of 5) 5' UTR (NM_178672, exon 1 of 5) 107 NM_178672 212986 Mm.134147 NM_178672 ENSMUSG00000062110 Scfd2 E430013M20Rik|STXBP1L1 Sec1 family domain containing 2 protein-coding common_peak1_43_502_-0.888004535925219_8.53041232184292_15.3687509751282 chr10 61333143 61334006 + 15.3687509751282 NA intron (NM_013753, intron 18 of 19) intron (NM_013753, intron 18 of 19) 35738 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak1_68_250_0.911051766296023_8.42706943709878_15.3664557430776 chr5 121220078 121220891 + 15.3664557430776 NA exon (NM_181421, exon 1 of 76) exon (NM_181421, exon 1 of 76) 265 NM_181421 269700 Mm.184589 NM_181421 ENSMUSG00000042744 Gm15800 A130010L24|AU042671|BC019639|EG545802|OTTMUSG00000026283|mKIAA0614 predicted gene 15800 protein-coding common_peak1_132_1474_-0.482598926474205_10.2851997758995_15.3663887805374 chr15 102202604 102204138 + 15.3663887805374 NA promoter-TSS (NM_001289694) promoter-TSS (NM_001289694) -274 NM_001289694 68744 Mm.352945 NM_153194 ENSMUSG00000046897 Zfp740 1110034O07Rik|AW548228|Znf740 zinc finger protein 740 protein-coding unique_peak2_6_130_-2.20008287389224_5.93338156459133_15.3648342782437 chr13 44586181 44587267 + 15.3648342782437 NA Intergenic (TTGG)n|Simple_repeat|Simple_repeat -144050 NM_021878 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding common_peak1_108_1201_-0.53947894518155_9.96148170812041_15.3642655519511 chr14 79520819 79522832 + 15.3642655519511 NA intron (NM_001286411, intron 1 of 8) intron (NM_001286411, intron 1 of 8) 6151 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak2_224_1518_0.405378069940868_10.7715951894725_15.3622423821509 chr6 38433098 38435153 + 15.3622423821509 NA 5' UTR (NM_177185, exon 1 of 17) 5' UTR (NM_177185, exon 1 of 17) 200 NM_177185 320538 Mm.302831 NM_177185 ENSMUSG00000038538 Ubn2 2900060J04Rik|6030408G03Rik|BC060116|D130059P03Rik|mKIAA2030 ubinuclein 2 protein-coding common_peak2_48_553_-0.836865929138504_8.69530920147994_15.3617222515769 chr19 41932357 41934117 + 15.3617222515769 NA promoter-TSS (NM_025644) promoter-TSS (NM_025644) 77 NM_001164561 66583 Mm.289086 NM_025644 ENSMUSG00000034321 Exosc1 2610035C18Rik|2610104C07Rik|2610312F07Rik|AI447561 exosome component 1 protein-coding common_peak1_56_636_-0.770650842706127_8.92982414090324_15.3602287046107 chr16 32107902 32109016 + 15.3602287046107 NA TTS (NM_025892) TTS (NM_025892) 8657 NM_025892 66994 Mm.22990 NM_025892 ENSMUSG00000035790 Cep19 1500031L02Rik|AI428934|AL022620 centrosomal protein 19 protein-coding common_peak1_87_373_0.766127905179026_8.92995841247715_15.3602287046105 chr12 21316068 21316870 + 15.3602287046105 NA promoter-TSS (NM_026347) promoter-TSS (NM_026347) 77 NM_026347 67732 Mm.335830 NM_026347 ENSMUSG00000062054 Iah1 1500019E20Rik|4833421E05Rik isoamyl acetate-hydrolyzing esterase 1 homolog protein-coding common_peak1_16_230_-1.44821278044189_7.12764265119511_15.3556651558552 chr18 24603985 24604372 + 15.3556651558552 NA promoter-TSS (NM_139143) promoter-TSS (NM_139143) 217 NM_021448 58523 Mm.25298 NM_021448 ENSMUSG00000024271 Elp2 AU023723|Epl2|StIP1|Statip1 elongator acetyltransferase complex subunit 2 protein-coding common_peak1_222_1499_0.40773708857116_10.7546153296688_15.3552721577237 chr7 130518942 130520373 + 15.3552721577237 NA promoter-TSS (NM_001136054) promoter-TSS (NM_001136054) -77 NM_013799 11907 Mm.216321 NM_013799 ENSMUSG00000030850 Ate1 AI225793|AW547406 arginyltransferase 1 protein-coding common_peak1_42_491_-0.896787335085289_8.4941208377966_15.3531775679457 chr5 122343822 122344583 + 15.3531775679457 NA exon (NM_144912, exon 5 of 11) exon (NM_144912, exon 5 of 11) 9993 NM_144912 231724 Mm.255587 NM_144912 ENSMUSG00000038569 Rad9b A630082N15Rik|BC021784 RAD9 checkpoint clamp component B protein-coding unique_peak2_7_140_-2.06991040045998_6.1045961521688_15.3528882144143 chr6 120453383 120454005 + 15.3528882144143 NA Intergenic Intergenic -9503 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak2_113_560_0.639254070127738_9.45148399567266_15.3528480139788 chr2 166614351 166616933 + 15.3528480139788 NA intron (NM_177782, intron 7 of 39) intron (NM_177782, intron 7 of 39) -57076 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_21_279_-1.26948527425102_7.49454037981946_15.3527249741409 chr19 5088067 5088449 + 15.3527249741409 NA promoter-TSS (NM_026553) promoter-TSS (NM_026553) -280 NM_026553 68090 Mm.44202 NM_026553 ENSMUSG00000024875 Yif1a 5330422J23Rik|54TM|Yif1|Yif1p Yip1 interacting factor homolog A (S. cerevisiae) protein-coding common_peak1_61_689_-0.737158035744869_9.0618735337931_15.347510109911 chr16 44172274 44172930 + 15.347510109911 NA promoter-TSS (NM_001029889) promoter-TSS (NM_001029889) -795 NM_001029889 207806 Mm.310566 NM_001029889 ENSMUSG00000068284 Usf3 5530400K22Rik|Gm1779|Gm608|mKIAA2018 upstream transcription factor family member 3 protein-coding common_peak2_84_936_-0.620263389806695_9.56177354275584_15.3409261733687 chr4 45529665 45531957 + 15.3409261733687 NA promoter-TSS (NM_001033306) promoter-TSS (NM_001033306) 17 NM_001033306 230126 Mm.251716 NM_001033306 ENSMUSG00000044813 Shb BC028832 src homology 2 domain-containing transforming protein B protein-coding common_peak1_84_936_-0.620263389806695_9.56177354275584_15.3409261733687 chr14 73049240 73050297 + 15.3409261733687 NA promoter-TSS (NM_001162412) promoter-TSS (NM_001162412) -654 NM_001162412 70086 Mm.158324 NM_133720 ENSMUSG00000033470 Cysltr2 2300001H05Rik|CYSLT2R|Cltr2|Cyslt2 cysteinyl leukotriene receptor 2 protein-coding common_peak1_59_197_1.00591212370445_8.13231268193183_15.3395920464073 chr13 32968930 32969802 + 15.3395920464073 NA intron (NM_011454, intron 2 of 6) RMER20C_Mm|LTR|ERVK 3853 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak1_64_721_-0.718940506554274_9.13638477361003_15.3378077116564-2 chr15 76757880 76758939 + 15.3378077116564 NA intron (NM_198420, intron 2 of 10) intron (NM_198420, intron 2 of 10) -34564 NM_176828 223665 Mm.291713 NM_145472 ENSMUSG00000033707 C030006K11Rik 1110033I13Rik RIKEN cDNA C030006K11 gene protein-coding common_peak1_64_721_-0.718940506554274_9.13638477361003_15.3378077116564 chr11 106535132 106536183 + 15.3378077116564 NA intron (NM_198292, intron 5 of 11) intron (NM_198292, intron 5 of 11) 34666 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA common_peak2_90_394_0.746636199655581_8.99902694289226_15.3314545601831 chr6 116192612 116194014 + 15.3314545601831 NA promoter-TSS (NM_177412) promoter-TSS (NM_177412) 61 NM_177412 330401 Mm.425352 NM_177412 ENSMUSG00000030126 Tmcc1 3632431M01Rik|mKIAA0779 transmembrane and coiled coil domains 1 protein-coding common_peak1_424_3644_0.268044335516512_11.9657252669726_15.3259915646827 chr13 52582454 52585494 + 15.3259915646827 NA intron (NM_001198977, intron 1 of 13) intron (NM_001198977, intron 1 of 13) 537 NM_001198977 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak1_14_210_-1.53905506729584_6.95157165505927_15.3255781981127 chr14 64666311 64666699 + 15.3255781981127 NA intron (NM_001081177, intron 1 of 39) PB1D10|SINE|Alu 13974 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak2_235_1624_0.392527024611359_10.8624875151089_15.3215529717109 chr19 40677741 40681009 + 15.3215529717109 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 19605 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak1_29_50_1.73623109062621_6.5405408872846_15.319456111962 chr13 20120306 20120782 + 15.319456111962 NA intron (NM_080288, intron 1 of 21) intron (NM_080288, intron 1 of 21) 30037 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding common_peak2_99_1100_-0.565358939055274_9.82191928403673_15.3194292929525 chr14 59200510 59202320 + 15.3194292929525 NA 5' UTR (NM_027764, exon 1 of 12) 5' UTR (NM_027764, exon 1 of 12) 187 NM_027764 71330 Mm.234195 NM_027764 ENSMUSG00000035469 Rcbtb1 5430409I18Rik|AW111883|CLLD7|CLLL7 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 protein-coding common_peak1_98_1089_-0.568657955850124_9.80578344173923_15.3150001655555 chr8 95084534 95086279 + 15.3150001655555 NA intron (NM_028805, intron 2 of 19) intron (NM_028805, intron 2 of 19) 4205 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding common_peak2_98_1089_-0.568657955850124_9.80578344173923_15.3150001655555 chr12 85110053 85111936 + 15.3150001655555 NA intron (NM_030225, intron 1 of 14) CpG 161 NM_030225 78920 Mm.296221 NM_030225 ENSMUSG00000004789 Dlst 1600017E01Rik|4632413C10Rik|4930529O08Rik|DLTS dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) protein-coding common_peak1_238_1653_0.389360994921303_10.8864240166319_15.3100727209372 chr18 5333675 5335000 + 15.3100727209372 NA intron (NM_178722, intron 1 of 4) CpG 102 NM_178722 240186 Mm.118257 NM_178722 ENSMUSG00000050945 Zfp438 9430031G09|9430091M14Rik|B830013J05Rik zinc finger protein 438 protein-coding common_peak1_18_249_-1.3654200812652_7.28307424402949_15.3075739637648 chr17 35840835 35841278 + 15.3075739637648 NA promoter-TSS (NM_001010833) promoter-TSS (NM_001010833) -442 NM_001010833 240087 Mm.218511 NM_001010833 ENSMUSG00000061607 Mdc1 6820401C03|AA413496|Nfbd1|mKIAA0170 mediator of DNA damage checkpoint 1 protein-coding common_peak1_93_1034_-0.585671653774313_9.72257922549953_15.3066133982586 chr11 50376588 50377484 + 15.3066133982586 NA promoter-TSS (NM_021510) promoter-TSS (NM_021510) -683 NM_021510 59013 Mm.21740 NM_021510 ENSMUSG00000007850 Hnrnph1 AI642080|E430005G16Rik|Hnrnph|Hnrph1 heterogeneous nuclear ribonucleoprotein H1 protein-coding common_peak1_374_3078_0.29000914312317_11.7332507236064_15.3031673453046 chr10 80797477 80799500 + 15.3031673453046 NA promoter-TSS (NM_013651) promoter-TSS (NM_013651) 138 NM_023900 78670 Mm.41479 NM_023900 ENSMUSG00000035278 Plekhj1 9530063M10Rik pleckstrin homology domain containing, family J member 1 protein-coding common_peak1_688_6926_0.196731722022673_12.8563808195066_15.3028838311985 chr13 111804811 111809903 + 15.3028838311985 NA intron (NM_011945, intron 1 of 19) intron (NM_011945, intron 1 of 19) 1626 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding common_peak1_41_481_-0.908802381245106_8.45848814560741_15.300166202233 chr1 95656627 95657568 + 15.300166202233 NA intron (NM_001159745, intron 2 of 3) intron (NM_001159745, intron 2 of 3) 10497 NM_009183 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak1_29_359_-1.08319666373197_7.95025476446369_15.29307086922 chr10 128535893 128536389 + 15.29307086922 NA Intergenic Intergenic -10282 NM_011843 23943 Mm.66056 NM_011843 ENSMUSG00000025366 Esyt1 Fam62a|Mbc2|vp115 extended synaptotagmin-like protein 1 protein-coding common_peak1_345_2759_0.305370291013375_11.5831376971722_15.2901276780304 chr19 44387626 44390023 + 15.2901276780304 NA Intergenic Intergenic 18885 NM_009127 20249 Mm.267377 NM_009127 ENSMUSG00000037071 Scd1 AA589638|AI265570|Scd|Scd-1|ab stearoyl-Coenzyme A desaturase 1 protein-coding common_peak2_60_678_-0.74274831319776_9.03589360764585_15.2811054622617 chr9 44304932 44306459 + 15.2811054622617 NA promoter-TSS (NM_172162) promoter-TSS (NM_172162) -24 NM_172162 102423 Mm.24570 NM_172162 ENSMUSG00000032119 Hinfp AA589481|HiNF-P|Mizf histone H4 transcription factor protein-coding common_peak1_372_3056_0.290891187074632_11.7233464304243_15.2754062045703 chr11 121701876 121704492 + 15.2754062045703 NA intron (NM_144797, intron 1 of 3) intron (NM_144797, intron 1 of 3) 757 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak1_51_584_-0.810259258643478_8.78716318514903_15.2734073011616 chr9 109081834 109082918 + 15.2734073011616 NA promoter-TSS (NM_025689) promoter-TSS (NM_025689) 5 NM_183250 66167 Mm.2395 NM_183250 ENSMUSG00000091537 Tma7 1110017O22Rik|Ccdc72 translational machinery associated 7 protein-coding common_peak2_216_1443_0.414363287112606_10.7030366704435_15.2733185437601 chr13 66932218 66934028 + 15.2733185437601 NA promoter-TSS (NM_025547) promoter-TSS (NM_025547) -51 NM_025547 66410 Mm.347939 NM_025547 ENSMUSG00000021519 Mterf3 2410017I18Rik|Mterfd1 mitochondrial transcription termination factor 3 protein-coding common_peak2_130_692_0.580375719709659_9.72689940199204_15.2714069601585 chr5 34760891 34762723 + 15.2714069601585 NA promoter-TSS (NM_010414) promoter-TSS (NM_010414) 67 NM_010414 15194 Mm.209071 NM_010414 ENSMUSG00000029104 Htt AI256365|C430023I11Rik|Hd|Hdh|IT15 huntingtin protein-coding common_peak1_467_4149_0.251406967012208_12.1445991046278_15.2682353617952 chr2 166654304 166659361 + 15.2682353617952 NA intron (NM_177782, intron 1 of 39) intron (NM_177782, intron 1 of 39) -15886 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak2_154_1728_-0.440934362029655_10.5352549726275_15.2676226634004 chr1 155049048 155051934 + 15.2676226634004 NA Intergenic Intergenic 49145 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_567_5370_0.22202147325055_12.5019857427808_15.2655607055228 chr2 72978415 72981545 + 15.2655607055228 NA promoter-TSS (NM_001098425) promoter-TSS (NM_001098425) 466 NM_001018042 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding common_peak2_71_269_0.881094387194548_8.51736279064811_15.2632576568131 chr13 85478258 85480207 + 15.2632576568131 NA Intergenic L1_Mus3|LINE|L1 -189746 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak1_273_2002_0.35500316190851_11.145448286767_15.2592423904157 chr6 34861518 34864059 + 15.2592423904157 NA promoter-TSS (NM_197986) promoter-TSS (NM_197986) -358 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak2_85_360_0.776484454553135_8.88409725416374_15.2567436538746 chr8 73353598 73354765 + 15.2567436538746 NA Intergenic Intergenic -1625 NM_010687 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_67_752_-0.699745171325045_9.20663346900941_15.2544367023978 chr11 94211397 94212156 + 15.2544367023978 NA intron (NM_009427, intron 1 of 1) CpG-2446 322 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding common_peak2_156_1751_-0.437311425195524_10.5561313470034_15.2510428888084 chr15 61983472 61988396 + 15.2510428888084 NA exon (NM_001177353, exon 1 of 3) exon (NM_001177353, exon 1 of 3) 593 NM_001177352 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding common_peak1_26_328_-1.13973620689565_7.79207567028742_15.250445856108 chr18 62155966 62156527 + 15.250445856108 NA Intergenic Intergenic 23735 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak2_52_593_-0.798577355357654_8.81503044312194_15.2497399483645 chr6 70791139 70793096 + 15.2497399483645 NA promoter-TSS (NM_009075) promoter-TSS (NM_009075) 58 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding common_peak2_431_3727_0.264470666930739_11.9964214781197_15.2483597247305 chr18 3336035 3338961 + 15.2483597247305 NA promoter-TSS (NM_001110852) promoter-TSS (NM_001110852) 91 NM_001110851 12916 Mm.5244 NM_013498 ENSMUSG00000063889 Crem ICER|ICERI cAMP responsive element modulator protein-coding common_peak1_39_460_-0.930876401612206_8.38318473962324_15.2473553774439 chr10 117982697 117983432 + 15.2473553774439 NA Intergenic MER124|DNA?|DNA? 57605 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_219_1472_0.409973925722779_10.7295286778972_15.2471208031977 chr8 70041697 70043759 + 15.2471208031977 NA promoter-TSS (NM_001167939) promoter-TSS (NM_001167939) 6 NM_001167939 74549 Mm.269061 NM_028993 ENSMUSG00000031858 Mau2 9130404D08Rik|A930019L04Rik|C77863|C79014|Mau-2|mKIAA0892 MAU2 sister chromatid cohesion factor protein-coding common_peak1_20_269_-1.29934095325233_7.42714512042467_15.2436964624659 chr8 70523274 70523786 + 15.2436964624659 NA promoter-TSS (NM_029366) promoter-TSS (NM_029366) -350 NM_029366 75620 Mm.482129 NM_029366 ENSMUSG00000055553 Kxd1 0610030B01Rik|2810422J05Rik|C78305 KxDL motif containing 1 protein-coding common_peak2_315_2438_0.323249670689844_11.4136988781411_15.2436822575553 chr11 109361541 109365627 + 15.2436822575553 NA promoter-TSS (NR_038097) promoter-TSS (NR_038097) 70 NR_038097 100036768 Mm.467767 NR_038097 ENSMUSG00000056687 Gm11696 OTTMUSG00000003456 predicted gene 11696 ncRNA common_peak2_124_645_0.598730424320779_9.63475556685431_15.2431712023532 chr1 127676577 127678846 + 15.2431712023532 NA 5' UTR (NM_028135, exon 1 of 8) 5' UTR (NM_028135, exon 1 of 8) 310 NM_028135 72160 Mm.281287 NM_028135 ENSMUSG00000026347 Tmem163 2610024A01Rik|SV31 transmembrane protein 163 protein-coding common_peak1_99_1099_-0.564047993902927_9.82126381146056_15.2428472151779 chr8 105264226 105265421 + 15.2428472151779 NA promoter-TSS (NM_001033161) promoter-TSS (NM_001033161) 175 NM_015821 50788 Mm.334764 NM_015821 ENSMUSG00000033313 Fbxl8 FBL8 F-box and leucine-rich repeat protein 8 protein-coding common_peak2_401_3383_0.276776674369412_11.8629021903047_15.2421571129178 chr19 45046454 45049579 + 15.2421571129178 NA intron (NM_001178013, intron 1 of 9) intron (NM_001178013, intron 1 of 9) 440 NM_001178013 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak1_56_180_1.04465283246697_8.02217230331669_15.240065169583 chr11 80141642 80142456 + 15.240065169583 NA intron (NM_183275, intron 1 of 3) intron (NM_183275, intron 1 of 3) 104 NM_183275 68550 Mm.18466 NM_183275 ENSMUSG00000046909 Tefm 1110002N22Rik transcription elongation factor, mitochondrial protein-coding common_peak1_68_762_-0.692943926587736_9.22906728354066_15.2394490947087 chr17 33929468 33930639 + 15.2394490947087 NA TTS (NM_009318) TTS (NM_009318) 159 NM_009059 19732 Mm.43777 NM_009059 ENSMUSG00000041354 Rgl2 KE1.5|Rab2l|Rgt2|Rlf ral guanine nucleotide dissociation stimulator-like 2 protein-coding common_peak2_512_4691_0.236780453828231_12.3143775249426_15.238572345292 chr9 90255602 90262422 + 15.238572345292 NA intron (NM_194334, intron 1 of 12) U6|snRNA|snRNA 11757 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak1_800_8438_0.1784310630349_13.1320718695533_15.2378436295873 chr1 64530147 64535463 + 15.2378436295873 NA promoter-TSS (NM_009952) promoter-TSS (NM_009952) 1 NM_001037726 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding common_peak2_46_127_1.20313108742602_7.60156554371301_15.2344011350022 chr4 132756537 132757463 + 15.2344011350022 NA exon (NM_133888, exon 1 of 8) exon (NM_133888, exon 1 of 8) 171 NM_133888 100340 Mm.287187 NM_133888 ENSMUSG00000028885 Smpdl3b 1110054A24Rik|AU045240|Asml3b sphingomyelin phosphodiesterase, acid-like 3B protein-coding common_peak2_166_1869_-0.42207594908704_10.6577845802315_15.2331930242327 chr6 136803249 136805864 + 15.2331930242327 NA promoter-TSS (NM_175652) promoter-TSS (NM_175652) -125 NM_175652 320332 Mm.246720 NM_175652 ENSMUSG00000096010 Hist4h4 B130044J01Rik histone cluster 4, H4 protein-coding common_peak1_19_258_-1.32567406005578_7.35397125765867_15.2328768255648 chr19 53904759 53905217 + 15.2328768255648 NA intron (NM_001168491, intron 1 of 11) intron (NM_001168491, intron 1 of 11) 1637 NM_001168491 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak1_23_298_-1.21022620610601_7.6188885711451_15.2306548318259 chr6 67376318 67376838 + 15.2306548318259 NA promoter-TSS (NM_008354) promoter-TSS (NM_008354) -441 NM_008354 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak2_48_137_1.16835178013252_7.69270034684443_15.2268180065402 chr2 43772357 43773450 + 15.2268180065402 NA intron (NM_001301832, intron 1 of 14) intron (NM_001301832, intron 1 of 14) 24079 NM_001301831 76117 Mm.217350 NM_153820 ENSMUSG00000049744 Arhgap15 5830480G12Rik Rho GTPase activating protein 15 protein-coding common_peak2_229_1568_0.397549065190086_10.8144041695631_15.2228996791288 chr16 49969214 49971723 + 15.2228996791288 NA Intergenic Intergenic -9992 NR_045001 628951 Mm.428032 NR_045001 Gm6936 - predicted gene 6936 ncRNA common_peak1_65_730_-0.7097953371052_9.15882992739984_15.222588853356 chr2 13407365 13408516 + 15.222588853356 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 83936 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak1_37_439_-0.954383198941414_8.30416811405395_15.2129644495854 chr9 61371785 61372201 + 15.2129644495854 NA promoter-TSS (NM_001083928) promoter-TSS (NM_001083928) -373 NM_001083928 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak1_132_709_0.572225098270316_9.7577877635272_15.2118380416752 chr16 87698614 87700327 + 15.2118380416752 NA intron (NM_007520, intron 1 of 4) CpG 516 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak1_27_338_-1.11857671311842_7.84585310657713_15.2100171225325 chr4 8927935 8928409 + 15.2100171225325 NA Intergenic MLT1B|LTR|ERVL-MaLR 237766 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding unique_peak2_8_149_-1.95074563980957_6.2534458705911_15.2092671863829 chr11 22339294 22340131 + 15.2092671863829 NA Intergenic IAPEz-int|LTR|ERVK -52917 NM_001252515 216565 Mm.491265 NM_153078 ENSMUSG00000042302 Ehbp1 AF424697|Flj21950|NACSIN EH domain binding protein 1 protein-coding unique_peak1_26_39_1.90027947195223_6.27206783086348_15.2092671863829 chr8 122330824 122331499 + 15.2092671863829 NA intron (NM_009569, intron 4 of 9) intron (NM_009569, intron 4 of 9) 29585 NM_133202 170732 Mm.154808 NM_133202 ENSMUSG00000039079 Trhr2 TRH-R2 thyrotropin releasing hormone receptor 2 protein-coding unique_peak1_17_12_2.80424564373158_5.10256254000688_15.2078270582123-2 chr13 100108180 100108631 + 15.2078270582123 NA intron (NM_011353, intron 1 of 2) CpG 386 NM_011353 20365 Mm.286177 NM_011353 ENSMUSG00000021643 Serf1 4F5|Msmac1|m4F5 small EDRK-rich factor 1 protein-coding unique_peak1_17_12_2.80424564373158_5.10256254000688_15.2078270582123-4 chr8 13683685 13684198 + 15.2078270582123 NA Intergenic Intergenic -6354 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding unique_peak1_17_12_2.80424564373158_5.10256254000688_15.2078270582123-3 chr6 52158436 52158968 + 15.2078270582123 NA promoter-TSS (NM_010449) promoter-TSS (NM_010449) 178 NR_131181 105242658 Mm.372521 NR_131181 ENSMUSG00000087658 Hotairm1 Gm15051|Hoxaas1|OTTMUSG00000018870 Hoxa transcript antisense RNA, myeloid-specific 1 ncRNA unique_peak1_17_12_2.80424564373158_5.10256254000688_15.2078270582123 chr11 77887422 77887854 + 15.2078270582123 NA intron (NM_008952, intron 2 of 7) AmnSINE1|SINE|Deu 6234 NM_008952 19193 Mm.8543 NM_008952 ENSMUSG00000017453 Pipox LPIPOX|Pso pipecolic acid oxidase protein-coding common_peak2_97_444_0.70582702224328_9.1505750369754_15.2066920386717 chr7 123428999 123430918 + 15.2066920386717 NA intron (NM_025304, intron 10 of 10) intron (NM_025304, intron 10 of 10) -32336 NM_007474 11833 Mm.273175 NM_007474 ENSMUSG00000030762 Aqp8 AI255744|AQP-8 aquaporin 8 protein-coding common_peak1_21_278_-1.26432356913524_7.49195952726157_15.2029169035441 chr17 44121484 44122100 + 15.2029169035441 NA Intergenic Intergenic -15984 NM_199016 224794 Mm.255971 NM_199016 ENSMUSG00000023961 Enpp4 4933413N07Rik|AA986363|AI195364|E-NPP 4|Gm90|mKIAA0879 ectonucleotide pyrophosphatase/phosphodiesterase 4 protein-coding common_peak1_337_4023_-0.279988430089761_11.8344203747606_15.2017132969733 chr11 95352558 95356008 + 15.2017132969733 NA intron (NM_172543, intron 1 of 7) intron (NM_172543, intron 1 of 7) 17265 NM_172543 215512 Mm.262113 NM_172543 ENSMUSG00000038893 Fam117a 5730593F17Rik|AW548096 family with sequence similarity 117, member A protein-coding common_peak1_35_418_-0.979508760640329_8.22105205337919_15.2002694070757 chr10 44449682 44450347 + 15.2002694070757 NA intron (NM_007548, intron 3 of 6) intron (NM_007548, intron 3 of 6) 8734 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding common_peak1_73_282_0.861737719565884_8.57552710261482_15.1993963346398 chr7 90384142 90385292 + 15.1993963346398 NA intron (NM_001289583, intron 8 of 19) intron (NM_001289583, intron 8 of 19) -2264 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak1_22_26_2.18357330193004_5.84667415312849_15.1973811104556-2 chr8 47173563 47173974 + 15.1973811104556 NA Intergenic Intergenic 115634 NM_001286376 71069 Mm.23973 NM_175162 ENSMUSG00000038143 Stox2 4933409N07Rik|AI449080|AI835114|mKIAA1392 storkhead box 2 protein-coding unique_peak1_22_26_2.18357330193004_5.84667415312849_15.1973811104556 chr17 87326873 87327378 + 15.1973811104556 NA intron (NM_028639, intron 8 of 19) intron (NM_028639, intron 8 of 19) 44239 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak2_165_983_0.493603675015464_10.189316342847_15.1922429321195 chr2 172370026 172371576 + 15.1922429321195 NA promoter-TSS (NM_024199) promoter-TSS (NM_024199) -202 NM_024199 67337 Mm.26944 NM_024199 ENSMUSG00000027498 Cstf1 1700057K18Rik|AI788832 cleavage stimulation factor, 3' pre-RNA, subunit 1 protein-coding common_peak1_49_562_-0.824363608757489_8.72480930770148_15.1863081926812 chr6 125236267 125237090 + 15.1863081926812 NA intron (NM_001286753, intron 1 of 4) intron (NM_001286753, intron 1 of 4) 349 NM_001033126 21940 Mm.367714 NM_001033126 ENSMUSG00000030336 Cd27 S152|Tnfrsf7|Tp55 CD27 antigen protein-coding common_peak2_502_4571_0.239321751711177_12.2782705640701_15.1810833728567 chr12 69370628 69374998 + 15.1810833728567 NA exon (NM_007481, exon 2 of 2) exon (NM_007481, exon 2 of 2) 663 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak2_320_2492_0.319437768017556_11.4433860515003_15.1809932382743 chr11 88113366 88119791 + 15.1809932382743 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) 17432 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_28_348_-1.09841991169708_7.89787327036111_15.1804342223755 chrX 151016427 151018053 + 15.1804342223755 NA promoter-TSS (NM_001168600) promoter-TSS (NM_001168600) 53 NM_001168600 237107 Mm.45987 NM_198110 ENSMUSG00000025266 Gnl3l BC020354 guanine nucleotide binding protein-like 3 (nucleolar)-like protein-coding common_peak1_28_348_-1.09841991169708_7.89787327036111_15.1804342223755 chr11 100859755 100860383 + 15.1804342223755 NA promoter-TSS (NM_001164062) promoter-TSS (NM_001164062) -415 NM_001164062 20850 Mm.277403 NM_011488 ENSMUSG00000004043 Stat5a AA959963|STAT5 signal transducer and activator of transcription 5A protein-coding common_peak1_28_348_-1.09841991169708_7.89787327036111_15.1804342223755-2 chr18 67874202 67874809 + 15.1804342223755 NA intron (NM_027556, intron 41 of 45) ORR1D1|LTR|ERVL-MaLR -58752 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_50_148_1.1285022566653_7.78341964879481_15.1779854874766 chr8 11203610 11204352 + 15.1779854874766 NA intron (NM_009931, intron 49 of 51) intron (NM_009931, intron 49 of 51) -108824 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak2_45_122_1.22255860994063_7.55379381030955_15.1754689522046 chr12 21370510 21371574 + 15.1754689522046 NA intron (NR_120376, intron 1 of 18) (GA)n|Simple_repeat|Simple_repeat 2590 NR_102380 11491 Mm.27681 NM_009615 ENSMUSG00000052593 Adam17 CD156b|Tace a disintegrin and metallopeptidase domain 17 protein-coding unique_peak2_13_199_-1.58390375094315_6.85190431430315_15.1752674849061 chr7 46606520 46607809 + 15.1752674849061 NA intron (NM_013789, intron 8 of 10) intron (NM_013789, intron 8 of 10) 32643 NM_013789 27414 Mm.76659 NM_013789 ENSMUSG00000030839 Sergef DelGEF|Gef|Gnef|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding common_peak1_121_623_0.60572954337108_9.58826699054779_15.1704105817447 chr18 12224197 12225682 + 15.1704105817447 NA intron (NM_008720, intron 1 of 24) intron (NM_008720, intron 1 of 24) 11447 NM_008720 18145 Mm.3484 NM_008720 ENSMUSG00000024413 Npc1 A430089E03Rik|C85354|D18Ertd139e|D18Ertd723e|lcsd|nmf164|spm Niemann-Pick type C1 protein-coding common_peak2_57_186_1.02838116581129_8.06108504279328_15.1652665018067 chr11 118362416 118363488 + 15.1652665018067 NA Intergenic C-rich|Low_complexity|Low_complexity -7541 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding common_peak1_15_219_-1.48510645039949_7.03880648832491_15.1613233707371-2 chr5 21246083 21246524 + 15.1613233707371 NA intron (NM_175437, intron 13 of 30) intron (NM_175437, intron 13 of 30) 60036 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_15_219_-1.48510645039949_7.03880648832491_15.1613233707371 chr11 83655718 83656136 + 15.1613233707371 NA Intergenic Intergenic -6549 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak2_125_654_0.592870374713327_9.65178628378148_15.1572746621902 chr17 21515421 21517621 + 15.1572746621902 NA Intergenic Intergenic -19018 NM_144515 22710 Mm.296100 NM_144515 ENSMUSG00000051341 Zfp52 KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29 zinc finger protein 52 protein-coding common_peak2_89_988_-0.597035762008122_9.65130882975505_15.1572746621902 chr15 66824212 66827096 + 15.1572746621902 NA intron (NM_009192, intron 1 of 8) intron (NM_009192, intron 1 of 8) 6175 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_24_308_-1.18544783576799_7.67873911002038_15.1552215600668 chr11 53891969 53892526 + 15.1552215600668 NA promoter-TSS (NM_011396) promoter-TSS (NM_011396) -544 NM_011396 20520 Mm.42253 NM_011396 ENSMUSG00000018900 Slc22a5 Lstpl|Octn2|jvs solute carrier family 22 (organic cation transporter), member 5 protein-coding common_peak1_24_308_-1.18544783576799_7.67873911002038_15.1552215600668-2 chr11 98479371 98479886 + 15.1552215600668 NA intron (NM_011771, intron 6 of 7) intron (NM_011771, intron 6 of 7) 32794 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak1_14_209_-1.53220139625477_6.94814481953873_15.1543828128504 chr12 86810601 86810866 + 15.1543828128504 NA Intergenic Intergenic 74081 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_133_717_0.569315977513028_9.77249802257957_15.1535282958814 chr11 95840411 95842824 + 15.1535282958814 NA promoter-TSS (NM_001284393) promoter-TSS (NM_001284393) -678 NM_023121 14710 Mm.46299 NM_023121 ENSMUSG00000038811 Gngt2 AV096488 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 protein-coding common_peak1_58_656_-0.754223155280505_8.98263798268208_15.1523788112623 chr15 5243407 5244296 + 15.1523788112623 NA 5' UTR (NM_008965, exon 1 of 3) 5' UTR (NM_008965, exon 1 of 3) 336 NM_001136079 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak1_610_5917_0.21124202130693_12.6365149918474_15.1505762037875 chr7 66177135 66181679 + 15.1505762037875 NA Intergenic Intergenic 69892 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_18_248_-1.35963772867119_7.28018306773249_15.1496657681853 chr4 3659587 3660023 + 15.1496657681853 NA intron (NR_040643, intron 3 of 3) intron (NR_040643, intron 3 of 3) 3299 NR_040643 70143 Mm.417835 NR_040643 ENSMUSG00000085394 2210414B05Rik - RIKEN cDNA 2210414B05 gene ncRNA common_peak1_64_719_-0.714938575996777_9.13438380833129_15.149249770877 chr5 9106661 9107992 + 15.149249770877 NA intron (NM_001081029, intron 2 of 4) intron (NM_001081029, intron 2 of 4) 6589 NM_001081029 652925 Mm.439954 NM_001081029 ENSMUSG00000079659 Tmem243 4930420K17Rik|E030031F02Rik transmembrane protein 243, mitochondrial protein-coding common_peak1_31_378_-1.04318846385957_8.04445980624131_15.1464579812351 chr8 117127415 117128051 + 15.1464579812351 NA intron (NM_001163028, intron 8 of 11) intron (NM_001163028, intron 8 of 11) -30402 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding common_peak1_124_646_0.596498877022196_9.63587134050361_15.143645115094 chr1 82724566 82725641 + 15.143645115094 NA intron (NM_001310695, intron 1 of 7) CpG 213 NM_001310699 75734 Mm.396863 NM_029409 ENSMUSG00000026150 Mff 5230400G24Rik|AI314724 mitochondrial fission factor protein-coding common_peak1_213_2435_-0.364715687364203_11.0679405742242_15.1368886931179 chr11 95833167 95835589 + 15.1368886931179 NA exon (NM_001163464, exon 4 of 8) exon (NM_001163464, exon 4 of 8) -7917 NM_023121 14710 Mm.46299 NM_023121 ENSMUSG00000038811 Gngt2 AV096488 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 protein-coding common_peak1_169_1902_-0.415805687235174_10.6861570026564_15.1356128838556 chr10 117709505 117710759 + 15.1356128838556 NA intron (NM_001288586, intron 1 of 10) CpG-1528 626 NM_010786 17246 Mm.22670 NM_010786 ENSMUSG00000020184 Mdm2 1700007J15Rik|AA415488|Mdm-2 transformed mouse 3T3 cell double minute 2 protein-coding common_peak2_312_2408_0.324224517755743_11.3963309371163_15.131500552793 chr19 47918016 47920467 + 15.131500552793 NA promoter-TSS (NM_001001738) promoter-TSS (NM_001001738) 58 NM_001001738 414801 Mm.29457 NM_001001738 ENSMUSG00000044948 Itprip 4833424O12Rik|DANGER|mKIAA1754 inositol 1,4,5-triphosphate receptor interacting protein protein-coding common_peak2_65_729_-0.707820394920143_9.15784245630731_15.1291255139049 chr17 87671897 87673552 + 15.1291255139049 NA exon (NM_008628, exon 1 of 16) exon (NM_008628, exon 1 of 16) 167 NM_008628 17685 Mm.4619 NM_008628 ENSMUSG00000024151 Msh2 AI788990 mutS homolog 2 protein-coding unique_peak2_9_158_-1.84836103883994_6.38870243586439_15.1278499957611 chr6 130301143 130302664 + 15.1278499957611 NA intron (NM_010646, intron 4 of 6) intron (NM_010646, intron 4 of 6) 4529 NR_033451 16631 Mm.441781 NM_010647 ENSMUSG00000030178 Klra13-ps Klra13|Ly49M killer cell lectin-like receptor subfamily A, member 13, pseudogene pseudo common_peak2_180_1116_0.463793844993047_10.3573103929798_15.12647584718 chr5 36572717 36576363 + 15.12647584718 NA intron (NM_001113362, intron 2 of 14) intron (NM_001113362, intron 2 of 14) 7857 NM_133910 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding common_peak2_153_1714_-0.440659009100752_10.5236633565098_15.1234629023147 chr13 58157028 58158999 + 15.1234629023147 NA intron (NM_198004, intron 1 of 4) intron (NM_198004, intron 1 of 4) 364 NM_198004 75731 Mm.293919 NM_198004 ENSMUSG00000050002 Idnk 5133401N09Rik idnK gluconokinase homolog (E. coli) protein-coding common_peak1_226_1541_0.399357697072697_10.7902658984514_15.1110952447514 chr9 37655905 37657697 + 15.1110952447514 NA intron (NM_025289, intron 1 of 8) intron (NM_025289, intron 1 of 8) 511 NM_025289 21376 Mm.28689 NM_025289 ENSMUSG00000011114 Tbrg1 AA408552|AA409675|Niam|Tb-5|mFLJ00213 transforming growth factor beta regulated gene 1 protein-coding common_peak1_86_368_0.765320824605457_8.91013741836312_15.1106557120422 chr10 71344417 71345477 + 15.1106557120422 NA promoter-TSS (NM_134007) promoter-TSS (NM_134007) -98 NM_134007 52637 Mm.254114 NM_134007 ENSMUSG00000037710 Cisd1 AU043990|AW743335|D10Ertd214e|Zcd1|mitoNEET CDGSH iron sulfur domain 1 protein-coding common_peak2_84_355_0.775908416886093_8.86368763940945_15.1083831257723 chr4 140934503 140936130 + 15.1083831257723 NA intron (NM_008812, intron 10 of 15) intron (NM_008812, intron 10 of 15) 22586 NR_045911 100126227 Mm.404073 NR_045911 ENSMUSG00000087698 Gm13031 OTTMUSG00000010081 predicted gene 13031 ncRNA common_peak2_60_204_0.985039351541526_8.17199977527621_15.1042517813487 chr4 44300664 44302016 + 15.1042517813487 NA intron (NM_010790, intron 1 of 17) ID_B1|SINE|B4 423 NM_010790 17279 Mm.268668 NM_010790 ENSMUSG00000035683 Melk AI327312|MPK38|mKIAA0175 maternal embryonic leucine zipper kinase protein-coding common_peak1_60_204_0.985039351541526_8.17199977527621_15.1042517813487 chr4 129032964 129033814 + 15.1042517813487 NA Intergenic Intergenic -24882 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding common_peak1_139_1550_-0.464312634139844_10.3668266539662_15.1011129670099 chr6 91110180 91112059 + 15.1011129670099 NA intron (NM_018815, intron 1 of 39) intron (NM_018815, intron 1 of 39) 5707 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding unique_peak1_27_43_1.82713313138063_6.37299818432761_15.1008178604829-2 chrX 107402861 107403393 + 15.1008178604829 NA exon (NM_008409, exon 1 of 6) exon (NM_008409, exon 1 of 6) 233 NM_008409 16431 Mm.193 NM_008409 ENSMUSG00000031239 Itm2a AW108051|Bricd2a|E25|Itm2 integral membrane protein 2A protein-coding unique_peak1_27_43_1.82713313138063_6.37299818432761_15.1008178604829 chr1 58742793 58743344 + 15.1008178604829 NA intron (NM_207653, intron 8 of 9) intron (NM_207653, intron 8 of 9) 12516 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak2_260_3022_-0.324832916808571_11.3993488052234_15.0986244453599 chr5 135008180 135010707 + 15.0986244453599 NA promoter-TSS (NR_033794) promoter-TSS (NR_033794) -13 NR_033794 68758 Mm.389700 NM_145215 ENSMUSG00000040532 Abhd11 1110054D16Rik|A630008N09Rik|Wbscr21 abhydrolase domain containing 11 protein-coding common_peak2_117_593_0.617819595427415_9.52322891851447_15.0954667960359 chr8 20296434 20298153 + 15.0954667960359 NA intron (NR_030708, intron 1 of 4) CpG 139 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo common_peak2_53_602_-0.787194313874133_8.84241703496302_15.0940460105937 chr18 39281012 39283352 + 15.0940460105937 NA intron (NM_175164, intron 17 of 22) intron (NM_175164, intron 17 of 22) 205063 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak2_84_933_-0.61563689185717_9.55946029378108_15.0924623618018 chr17 56989379 56991317 + 15.0924623618018 NA promoter-TSS (NM_017393) promoter-TSS (NM_017393) 84 NM_017393 53895 Mm.287892 NM_017393 ENSMUSG00000002660 Clpp AU019820|D17Wsu160e caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding common_peak2_151_866_0.520312953734123_10.0200446600889_15.0853878169256 chr16 38346352 38347983 + 15.0853878169256 NA exon (NM_001017429, exon 1 of 3) exon (NM_001017429, exon 1 of 3) 168 NM_001017429 12856 Mm.27396 NM_001017429 ENSMUSG00000046516 Cox17 AI037035 cytochrome c oxidase assembly protein 17 protein-coding common_peak1_116_1287_-0.513838912353473_10.0739974219379_15.0816051606934 chr17 46160309 46161834 + 15.0816051606934 NA promoter-TSS (NM_001145979) promoter-TSS (NM_001145979) 39 NM_001145979 56055 Mm.22147 NM_019581 ENSMUSG00000023952 Gtpbp2 nmf205 GTP binding protein 2 protein-coding common_peak2_90_396_0.73934984557709_9.0026701199315_15.0777366088607 chr10 71344203 71345542 + 15.0777366088607 NA promoter-TSS (NM_134007) promoter-TSS (NM_134007) -23 NM_134007 52637 Mm.254114 NM_134007 ENSMUSG00000037710 Cisd1 AU043990|AW743335|D10Ertd214e|Zcd1|mitoNEET CDGSH iron sulfur domain 1 protein-coding common_peak1_209_1381_0.419650641474917_10.6423672211257_15.0775877112612 chr5 110175916 110177528 + 15.0775877112612 NA promoter-TSS (NM_008146) promoter-TSS (NM_008146) 21 NM_008146 269682 Mm.9392 NM_008146 ENSMUSG00000029502 Golga3 5330413L04|5430416E01Rik|AI449376|AW490576|G1-499-14|Mea-2|Mea2|repro27 golgi autoantigen, golgin subfamily a, 3 protein-coding common_peak2_189_1197_0.448669908672782_10.4507471471252_15.0701272232758 chr12 33301579 33303852 + 15.0701272232758 NA intron (NM_001033436, intron 1 of 7) intron (NM_001033436, intron 1 of 7) 200 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_195_2214_-0.382990124158985_10.9215959213629_15.0621619175177 chr5 31451228 31455924 + 15.0621619175177 NA intron (NM_172993, intron 2 of 13) intron (NM_172993, intron 2 of 13) 1140 NM_172993 269639 Mm.259127 NM_172993 ENSMUSG00000062761 Zfp512 2500002M11Rik|AI450173|D230008H22|Znf512 zinc finger protein 512 protein-coding common_peak2_125_655_0.590669466520055_9.65288673787811_15.0587088949735 chr17 14942677 14944046 + 15.0587088949735 NA promoter-TSS (NM_175173) promoter-TSS (NM_175173) 177 NM_026451 67912 Mm.390949 NM_026451 ENSMUSG00000050088 1600012H06Rik - RIKEN cDNA 1600012H06 gene protein-coding common_peak1_68_760_-0.689157323256751_9.22717398187517_15.0565460977827 chr2 29054388 29055369 + 15.0565460977827 NA exon (NM_001166705, exon 1 of 6) exon (NM_001166705, exon 1 of 6) 188 NM_001166705 329375 Mm.425079 NM_001085514 ENSMUSG00000079502 Cfap77 1700101E01Rik|Gm823 cilia and flagella associated protein 77 protein-coding common_peak2_241_2781_-0.338727548720435_11.272542930182_15.0505918690336 chr7 106526495 106530928 + 15.0505918690336 NA Intergenic Intergenic -87638 NR_003967 209380 Mm.461779 NM_001001318 Gm4759 EG209380 GTPase, very large interferon inducible 1 pseudogene pseudo common_peak1_219_1475_0.407038634698232_10.7309963234095_15.0491887562501 chr6 18847928 18849730 + 15.0491887562501 NA intron (NM_133939, intron 1 of 3) G-rich|Low_complexity|Low_complexity 194 NM_133939 76522 Mm.275158 NM_133939 ENSMUSG00000044155 Lsm8 2010003I05Rik|AW214405|Naa38 LSM8 homolog, U6 small nuclear RNA associated protein-coding common_peak2_163_1830_-0.423748188359198_10.6265419816177_15.049023808398 chr8 105899694 105901806 + 15.049023808398 NA intron (NM_173432, intron 1 of 2) CpG 276 NM_173432 244631 Mm.27627 NM_173432 ENSMUSG00000048310 Pskh1 AW539964|E130013P03Rik|b2b1230Clo protein serine kinase H1 protein-coding common_peak1_173_1055_0.475016022493755_10.2819021306053_15.0476805051297 chr15 73742574 73744827 + 15.0476805051297 NA intron (NM_001166388, intron 1 of 5) intron (NM_001166388, intron 1 of 5) -4326 NM_008975 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak1_58_193_1.0056135628547_8.10271962361448_15.044507422095 chr7 121706809 121707481 + 15.044507422095 NA exon (NM_001033173, exon 1 of 16) exon (NM_001033173, exon 1 of 16) 108 NM_001033173 76179 Mm.122538 NM_001033173 ENSMUSG00000063317 Usp31 6330567E21Rik|mKIAA1203 ubiquitin specific peptidase 31 protein-coding common_peak2_188_1188_0.45021067635941_10.4406383379254_15.0399441652444 chr11 118152504 118155360 + 15.0399441652444 NA Intergenic Intergenic -24713 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak1_65_728_-0.7058427454797_9.15685363158709_15.035888616596 chr10 86685139 86686201 + 15.035888616596 NA intron (NR_015572, intron 1 of 2) CpG 143 NR_015572 66263 Mm.392261 NR_015572 1810014B01Rik - RIKEN cDNA 1810014B01 gene pseudo common_peak1_179_2020_-0.401450346442392_10.7801284331585_15.0345166903194 chr1 164456795 164459061 + 15.0345166903194 NA 5' UTR (NM_009721, exon 1 of 6) 5' UTR (NM_009721, exon 1 of 6) 427 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding common_peak1_43_499_-0.87937423078178_8.5260971692712_15.0311453386794 chr17 87974972 87975661 + 15.0311453386794 NA exon (NM_010830, exon 1 of 10) exon (NM_010830, exon 1 of 10) 266 NM_010830 17688 Mm.18210 NM_010830 ENSMUSG00000005370 Msh6 AU044881|AW550279|GTBP|Gtmbp mutS homolog 6 protein-coding unique_peak2_5_118_-2.33426691758856_5.72768430451366_15.0294911407566 chr16 22260712 22261707 + 15.0294911407566 NA intron (NM_009186, intron 1 of 8) intron (NM_009186, intron 1 of 8) 4720 NM_009186 20462 Mm.210352 NM_009186 ENSMUSG00000022858 Tra2b 5730405G21Rik|D16Ertd266e|SIG-41|Sfrs10|Silg41|TRA2beta transformer 2 beta homolog (Drosophila) protein-coding common_peak2_194_1243_0.440278266355577_10.5009099033084_15.0288789302098 chr1 162569988 162572217 + 15.0288789302098 NA intron (NM_016796, intron 1 of 7) CpG 274 NM_016796 53330 Mm.10699 NM_016796 ENSMUSG00000026696 Vamp4 D1Ertd147e vesicle-associated membrane protein 4 protein-coding unique_peak2_16_228_-1.43566752712277_7.12137002453556_15.0277947882702 chr9 33006993 33008470 + 15.0277947882702 NA Intergenic Intergenic -78765 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA unique_peak1_28_47_1.76370081379141_6.46681290761686_15.0264560318009 chr13 19619205 19619792 + 15.0264560318009 NA exon (NM_134065, exon 1 of 3) exon (NM_134065, exon 1 of 3) 332 NM_134065 105298 Mm.275054 NM_134065 ENSMUSG00000002808 Epdr1 AU040950|AV006210|Epdm2|Epdr2|MERP-1|MERP-2|MERP2|Ucc1 ependymin related protein 1 (zebrafish) protein-coding common_peak1_104_496_0.668478189114532_9.29134113611955_15.026032473701 chr14 50944248 50945329 + 15.026032473701 NA intron (NM_013632, intron 1 of 5) intron (NM_013632, intron 1 of 5) 485 NM_013632 18950 Mm.17932 NM_013632 ENSMUSG00000021871 Pnp AL024301|AU015798|Np|Np-1|Np-2|Pnp1 purine-nucleoside phosphorylase protein-coding common_peak1_242_1697_0.380855855593126_10.9200486713496_15.0236481824904 chr7 128052700 128055176 + 15.0236481824904 NA Intergenic Intergenic -8702 NM_001082960 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak2_179_1108_0.464359609775634_10.3472234550495_15.0232030100708 chr5 131519547 131519870 + 15.0232030100708 NA intron (NM_177047, intron 6 of 18) B1F1|SINE|Alu -212186 NM_145218 212996 Mm.299204 NM_145218 ENSMUSG00000034040 Wbscr17 AA388321|E330012B09Rik Williams-Beuren syndrome chromosome region 17 homolog (human) protein-coding common_peak2_225_2581_-0.352141475948432_11.158202547333_15.0226505401989 chr13 101705095 101709233 + 15.0226505401989 NA intron (NM_001077495, intron 4 of 15) intron (NM_001077495, intron 4 of 15) -14534 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_118_601_0.613452693479942_9.54034602349967_15.0202594757964 chr1 43142993 43146156 + 15.0202594757964 NA intron (NM_001289533, intron 2 of 5) intron (NM_001289533, intron 2 of 5) 19387 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_30_367_-1.05687975132271_7.99512208039566_15.0192599276165 chr8 70760405 70760959 + 15.0192599276165 NA intron (NM_183170, intron 1 of 4) CpG 239 NM_183170 234384 Mm.213010 NM_183170 ENSMUSG00000035559 Mpv17l2 Fksg24 MPV17 mitochondrial membrane protein-like 2 protein-coding common_peak2_157_917_0.506361058885865_10.0955308728567_15.018961818871 chr15 102135398 102136941 + 15.018961818871 NA promoter-TSS (NM_001033277) promoter-TSS (NM_001033277) 46 NM_001033277 223918 Mm.385009 NM_001033277 ENSMUSG00000036966 Spryd3 BC008150 SPRY domain containing 3 protein-coding common_peak2_66_738_-0.698886853996427_9.17998712714794_15.0185460284664-2 chr2 144713813 144716478 + 15.0185460284664 NA intron (NM_025314, intron 4 of 5) RMER13B|LTR|ERVK -108521 NM_025490 66328 Mm.45377 NM_025490 ENSMUSG00000027431 Scp2d1 1700010M22Rik SCP2 sterol-binding domain containing 1 protein-coding common_peak2_66_738_-0.698886853996427_9.17998712714794_15.0185460284664 chr19 46055752 46057584 + 15.0185460284664 NA exon (NM_001081214, exon 1 of 14) exon (NM_001081214, exon 1 of 14) 129 NM_001081214 226169 Mm.2415 NM_145504 ENSMUSG00000055491 Pprc1 A930018M19|BC013720|PRC|mKIAA0595 peroxisome proliferative activated receptor, gamma, coactivator-related 1 protein-coding common_peak1_66_738_-0.698886853996427_9.17998712714794_15.0185460284664 chr12 100890673 100891516 + 15.0185460284664 NA intron (NM_175493, intron 1 of 2) intron (NM_175493, intron 1 of 2) 8430 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding unique_peak1_16_10_2.94410464233687_4.93148393980573_15.0157457670165 chr6 8345705 8346120 + 15.0157457670165 NA intron (NM_001302353, intron 2 of 4) (GGGA)n|Simple_repeat|Simple_repeat 86624 NM_001302353 100036521 Mm.446106 NM_001302353 ENSMUSG00000089862 Umad1 Gm16039|OTTMUSG00000029336 UMAP1-MVP12 associated (UMA) domain containing 1 protein-coding common_peak1_176_1984_-0.405262370835212_10.7522921066127_15.0138699460727 chr12 69196350 69198248 + 15.0138699460727 NA promoter-TSS (NR_033222) promoter-TSS (NR_033222) 88 NR_033222 414085 Mm.256223 NR_033222 ENSMUSG00000097061 9330151L19Rik - RIKEN cDNA 9330151L19 gene ncRNA common_peak2_271_1986_0.353609348469925_11.1331808314846_15.0130462700231 chr1 13588120 13590988 + 15.0130462700231 NA intron (NM_028173, intron 1 of 10) CpG 356 NM_028173 72265 Mm.28765 NM_028173 ENSMUSG00000025935 Tram1 1810049E02Rik|TRAMP translocating chain-associating membrane protein 1 protein-coding common_peak2_82_342_0.787441102995535_8.81578531767058_15.0104421980814 chr5 143621932 143623178 + 15.0104421980814 NA 5' UTR (NM_011182, exon 1 of 13) 5' UTR (NM_011182, exon 1 of 13) 108 NM_011182 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding common_peak1_45_519_-0.857294697748589_8.59372046415416_15.0091258919354 chr11 5444286 5444969 + 15.0091258919354 NA exon (NM_001080924, exon 1 of 9) exon (NM_001080924, exon 1 of 9) 220 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding common_peak1_383_3185_0.282694161312211_11.7788776321814_15.0085520486601 chr12 69473346 69477173 + 15.0085520486601 NA intron (NR_038060, intron 1 of 4) intron (NR_038060, intron 1 of 4) 291 NR_038060 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak1_98_1085_-0.563353923990197_9.80313142580926_15.0081561283917 chr10 128458242 128459530 + 15.0081561283917 NA promoter-TSS (NM_001114097) promoter-TSS (NM_001114097) 206 NR_106183 102465894 NR_106183 ENSMUSG00000098957 Mir8105 Gm27346|mmu-mir-8105 microRNA 8105 ncRNA common_peak1_174_1064_0.472913586288653_10.2930945082575_15.0077461746984 chr4 103214233 103215629 + 15.0077461746984 NA promoter-TSS (NM_177732) promoter-TSS (NM_177732) -47 NM_177732 242585 Mm.281800 NM_177732 ENSMUSG00000028521 Slc35d1 AI834976|C330011J09|UGTREL7|mKIAA0260 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 protein-coding common_peak1_230_1581_0.393322172453558_10.8241949706996_15.0054529950639 chr15 75113757 75116707 + 15.0054529950639 NA Intergenic Intergenic -3283 NM_001099217 100041546 Mm.482110 NM_001099217 ENSMUSG00000022584 Ly6c2 Ly-6C.2|Ly-6C2 lymphocyte antigen 6 complex, locus C2 protein-coding common_peak1_47_539_-0.83642781777238_8.65860168816464_15.0022650917396 chr7 4812890 4813573 + 15.0022650917396 NA promoter-TSS (NM_133777) promoter-TSS (NM_133777) -891 NM_133777 77891 Mm.389787 NM_133777 ENSMUSG00000060860 Ube2s 0910001J09Rik|6720465F12Rik|AA409170|E2-EPF ubiquitin-conjugating enzyme E2S protein-coding common_peak2_33_67_1.54268573091019_6.85880570670543_15.0005417061034 chr18 56431918 56432495 + 15.0005417061034 NA promoter-TSS (NM_026240) promoter-TSS (NM_026240) 74 NM_026240 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|NS3TP2 GRAM domain containing 3 protein-coding unique_peak2_13_198_-1.57667218171208_6.84828852968761_15.0005417061034 chr10 98784655 98785620 + 15.0005417061034 NA Intergenic B1F|SINE|Alu -130015 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_133_1479_-0.474225449180233_10.2942687359262_14.9960804384499 chr11 70668100 70670019 + 14.9960804384499 NA TTS (NM_001190378) TTS (NM_001190378) 357 NM_172561 216873 Mm.432524 NM_172561 ENSMUSG00000018287 Spag7 5730443G10|ACRP|FSA-1|Fsa1l sperm associated antigen 7 protein-coding common_peak1_15_218_-1.47853379647601_7.03552016136317_14.9943290784031 chr14 115041933 115042240 + 14.9943290784031 NA Intergenic CpG -1585 NR_029785 723905 NR_029785 ENSMUSG00000065508 Mir17 Mirn17|mir-17|mmu-mir-17 microRNA 17 ncRNA common_peak2_264_3070_-0.32064544465444_11.4241700746487_14.9929151340133 chr3 107035633 107040651 + 14.9929151340133 NA TTS (NM_008418) TTS (NM_008418) -1362 NR_033498 229694 Mm.347584 NM_173787 ENSMUSG00000056145 AI504432 A230102G19 expressed sequence AI504432 ncRNA common_peak1_18_247_-1.35383210698998_7.27728025689188_14.9922499384303 chr17 16951506 16951907 + 14.9922499384303 NA Intergenic Intergenic -112397 NM_001005358 449000 Mm.483718 NM_001005358 ENSMUSG00000096696 Zfp960 - zinc finger protein 960 protein-coding common_peak2_91_1008_-0.587025032640135_9.68519794278629_14.9921972702558 chr11 51938077 51939851 + 14.9921972702558 NA Intergenic MLT1F|LTR|ERVL-MaLR -28667 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_195_1253_0.437779226481357_10.5112112460427_14.9893453481514 chr12 102295569 102297711 + 14.9893453481514 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 12999 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_196_2224_-0.380483004115822_10.9293481186832_14.9866640941916 chr13 85506518 85508645 + 14.9866640941916 NA Intergenic Intergenic -218095 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak2_99_460_0.690616874079756_9.19393137746922_14.9857211409009 chr1 133347251 133349333 + 14.9857211409009 NA Intergenic Intergenic -2274 NM_031193 19702 Mm.220955 NM_031193 Ren2 Ren|Ren-2|Ren-B|Rn-2|Rnr renin 2 tandem duplication of Ren1 protein-coding unique_peak2_14_208_-1.52531501066953_6.94470162674611_14.9837253449629 chr1 51570115 51571370 + 14.9837253449629 NA Intergenic Tigger7|DNA|TcMar-Tigger -92343 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak1_170_1912_-0.412987922642653_10.6951271970248_14.9798739136388 chr5 142928541 142930299 + 14.9798739136388 NA Intergenic Intergenic -22666 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak2_371_4472_-0.262985699744297_11.9955341931324_14.9796005161784 chr7 25266478 25271246 + 14.9796005161784 NA intron (NM_001302811, intron 1 of 20) intron (NM_001302811, intron 1 of 20) 1163 NM_001302811 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak1_152_1700_-0.440362132382644_10.5119863594721_14.9793239515803 chr7 141265007 141266564 + 14.9793239515803 NA 5' UTR (NM_001252601, exon 2 of 10) 5' UTR (NM_001252601, exon 2 of 10) 639 NM_001252601 54123 Mm.3233 NM_016850 ENSMUSG00000025498 Irf7 - interferon regulatory factor 7 protein-coding common_peak2_166_995_0.486744673619878_10.203374268878_14.9739924062736 chr11 50224093 50227706 + 14.9739924062736 NA intron (NM_145926, intron 1 of 14) CpG 564 NM_145926 103534 Mm.86759 NM_145926 ENSMUSG00000036620 Mgat4b AA407995|GnTIVb mannoside acetylglucosaminyltransferase 4, isoenzyme B protein-coding common_peak1_70_265_0.877877110345828_8.4942209906741_14.9718406452005 chr11 115366763 115367837 + 14.9718406452005 NA intron (NM_175454, intron 1 of 18) CpG 419 NM_175454 217310 Mm.205707 NM_175454 ENSMUSG00000034586 Hid1 C630004H02Rik HID1 domain containing protein-coding common_peak2_132_1468_-0.47671836789392_10.2822594966093_14.970165415967 chr13 92353176 92355797 + 14.970165415967 NA promoter-TSS (NM_010049) promoter-TSS (NM_010049) -297 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding common_peak2_169_1899_-0.413529544179463_10.6850189311286_14.9618819495094 chr4 134913396 134915769 + 14.9618819495094 NA intron (NM_027935, intron 1 of 6) intron (NM_027935, intron 1 of 6) 334 NM_027935 71817 Mm.88349 NM_027935 ENSMUSG00000028822 Tmem50a 3200001F09Rik|CAM|Smp1 transmembrane protein 50A protein-coding common_peak2_135_1502_-0.470256099383123_10.3185012442248_14.9607724864793 chr2 127269451 127271467 + 14.9607724864793 NA 5' UTR (NM_139308, exon 1 of 8) 5' UTR (NM_139308, exon 1 of 8) 230 NM_139308 99138 Mm.41271 NM_139308 ENSMUSG00000027367 Stard7 AI852671|AL022671|AW544915 START domain containing 7 protein-coding common_peak2_670_6700_0.197740172391908_12.8090307779789_14.9584251094359 chr14 27335325 27346841 + 14.9584251094359 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) 5046 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_89_390_0.741766151443635_8.98190787302917_14.9560690057082 chr12 64917585 64918586 + 14.9560690057082 NA 5' UTR (NM_001025605, exon 1 of 5) 5' UTR (NM_001025605, exon 1 of 5) 174 NM_001025605 217648 Mm.341586 NM_001025605 ENSMUSG00000047227 Gm527 - predicted gene 527 protein-coding unique_peak1_31_59_1.61597497870301_6.71487808496002_14.9557425782628 chr1 53795308 53796088 + 14.9557425782628 NA Intergenic Intergenic -10483 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak2_90_397_0.735720422176398_9.00448483163185_14.9519087361489 chr3 40893449 40895022 + 14.9519087361489 NA promoter-TSS (NM_026622) promoter-TSS (NM_026622) -42 NM_026622 269423 Mm.32373 NM_026622 ENSMUSG00000037818 Abhd18 2310068E01Rik|3110057O12Rik|AI645591 abhydrolase domain containing 18 protein-coding unique_peak1_24_33_1.99855235088604_6.08673901669336_14.9344977374858-2 chr7 128194978 128195480 + 14.9344977374858 NA intron (NM_001029872, intron 21 of 30) RLTR14|LTR|ERV1 8099 NR_045183 70973 Mm.441564 NR_045183 ENSMUSG00000108354 4931431B13Rik 1700108I23Rik|AA536668 RIKEN cDNA 4931431B13 gene ncRNA unique_peak1_24_33_1.99855235088604_6.08673901669336_14.9344977374858 chr3 60510836 60511483 + 14.9344977374858 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 9980 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_48_549_-0.826411571501337_8.69008202266135_14.9330107317117 chr11 77793255 77794198 + 14.9330107317117 NA intron (NM_011586, intron 1 of 39) intron (NM_011586, intron 1 of 39) -7572 NM_001291214 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak1_105_504_0.662214498990311_9.31124682713431_14.9304077127578 chr3 31061562 31062567 + 14.9304077127578 NA Intergenic Intergenic 23098 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA common_peak2_34_406_-0.987439269742714_8.17516534939489_14.9302890369261 chr7 31000207 31001689 + 14.9302890369261 NA Intergenic Intergenic 19027 NM_001242647 76415 Mm.259739 NM_175240 ENSMUSG00000046826 Fam187b 1700020B09Rik|Tmem162 family with sequence similarity 187, member B protein-coding common_peak1_351_4202_-0.270956753712598_11.9017253642957_14.9296571434138 chr4 133671500 133674200 + 14.9296571434138 NA promoter-TSS (NM_001145956) promoter-TSS (NM_001145956) -203 NM_001145956 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak1_192_2175_-0.38465754880408_10.8951340668483_14.9294324174997 chr4 32125908 32128184 + 14.9294324174997 NA Intergenic Intergenic 162939 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_211_2406_-0.364054038658672_11.0509934071452_14.9291742342049 chr5 135009080 135010642 + 14.9291742342049 NA non-coding (NR_033794, exon 1 of 5) non-coding (NR_033794, exon 1 of 5) 405 NR_033794 68758 Mm.389700 NM_145215 ENSMUSG00000040532 Abhd11 1110054D16Rik|A630008N09Rik|Wbscr21 abhydrolase domain containing 11 protein-coding common_peak2_162_961_0.493951360151328_10.1568687638457_14.9269270047394 chr15 84191439 84193562 + 14.9269270047394 NA intron (NM_178614, intron 1 of 14) intron (NM_178614, intron 1 of 14) 267 NM_178614 68653 Mm.290725 NM_178614 ENSMUSG00000022437 Samm50 1110030L07Rik SAMM50 sorting and assembly machinery component protein-coding common_peak2_191_1217_0.443313983744831_10.4719554097787_14.9244983047189 chr1 58719442 58723866 + 14.9244983047189 NA intron (NM_207653, intron 1 of 9) B3|SINE|B2 8368 NM_207653 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak1_19_256_-1.3144903215631_7.34837938841233_14.9235566638829 chr11 4096245 4096708 + 14.9235566638829 NA TTS (NM_144520) TTS (NM_144520) -1045 NM_026443 67900 Mm.41719 NM_026443 ENSMUSG00000004748 Mtfp1 1700020C11Rik|2610507A21Rik|AV005788|Mtp18 mitochondrial fission process 1 protein-coding common_peak2_171_1039_0.476583979598209_10.2606598028276_14.9073226336913 chr5 139483075 139485365 + 14.9073226336913 NA intron (NM_001159908, intron 1 of 6) CpG 271 NM_133349 100494 Mm.24521 NM_133349 ENSMUSG00000053581 Zfand2a AA407930|AU016206|Airap zinc finger, AN1-type domain 2A protein-coding common_peak1_21_276_-1.25394442335524_7.48676995437157_14.904683424248 chr13 85509253 85509812 + 14.904683424248 NA Intergenic Intergenic -220046 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak2_73_284_0.851577853345661_8.58060703572493_14.9021109745693 chr2 128367123 128368828 + 14.9021109745693 NA intron (NR_028589, intron 1 of 2) L3b|LINE|CR1 61376 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_356_2887_0.295351859505756_11.64353095664_14.9014216815972 chr1 180400405 180405744 + 14.9014216815972 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -72525 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_813_8629_0.1746325314593_13.162461109796_14.9013377321052 chr4 140943714 140948228 + 14.9013377321052 NA intron (NM_008812, intron 13 of 15) intron (NM_008812, intron 13 of 15) 11931 NR_045911 100126227 Mm.404073 NR_045911 ENSMUSG00000087698 Gm13031 OTTMUSG00000010081 predicted gene 13031 ncRNA common_peak1_55_621_-0.767593708926322_8.89697391566744_14.9007468245848 chr9 19622112 19622763 + 14.9007468245848 NA intron (NM_172918, intron 1 of 8) intron (NM_172918, intron 1 of 8) 346 NM_172918 244713 Mm.67366 NM_172918 ENSMUSG00000057551 Zfp317 4932416G03|D230022C05Rik|KRAB9|Zfp67|Zfp75|mszf40 zinc finger protein 317 protein-coding common_peak1_284_2121_0.34139536551373_11.2219066236716_14.8999168833668 chr8 78508036 78510266 + 14.8999168833668 NA promoter-TSS (NM_029736) promoter-TSS (NM_029736) -177 NM_001282109 76775 Mm.334631 NM_029736 ENSMUSG00000031684 Slc10a7 2410193C02Rik|P7 solute carrier family 10 (sodium/bile acid cotransporter family), member 7 protein-coding common_peak2_112_1239_-0.520604907101838_10.0158219517233_14.8993425193893 chr9 100454090 100458792 + 14.8993425193893 NA Intergenic MTC|LTR|ERVL-MaLR 30032 NM_001033543 213208 Mm.242896 NM_001033543 ENSMUSG00000044244 Il20rb AV228068|Fndc6|Gm186|Il20R2 interleukin 20 receptor beta protein-coding common_peak1_42_487_-0.885010167308936_8.48823225390842_14.8990048543457 chr2 173452444 173453233 + 14.8990048543457 NA Intergenic Intergenic -69754 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding common_peak1_237_1650_0.38456027651274_10.8814045431696_14.8980624799744 chr1 144305978 144308468 + 14.8980624799744 NA Intergenic Intergenic -58119 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak1_32_386_-1.01886980848353_8.08675485190265_14.8969660505376-2 chr6 8641973 8642644 + 14.8969660505376 NA intron (NM_001252266, intron 11 of 11) L2a|LINE|L2 116150 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak1_32_386_-1.01886980848353_8.08675485190265_14.8969660505376 chr10 4386300 4387079 + 14.8969660505376 NA intron (NM_001033466, intron 1 of 2) intron (NM_001033466, intron 1 of 2) 1419 NM_001033466 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding common_peak1_175_1074_0.469513731776196_10.3048778103649_14.8919194144883 chr2 144368343 144369737 + 14.8919194144883 NA promoter-TSS (NM_001164813) promoter-TSS (NM_001164813) 5 NM_181417 228714 Mm.227925 NM_181417 ENSMUSG00000027425 Csrp2bp 2510008M08Rik|ATAC2|AU023459|D2Ertd473e|D2Wsu131e|E430020F17|Kat14 cysteine and glycine-rich protein 2 binding protein protein-coding unique_peak1_15_8_3.12632826168286_4.73308913228374_14.889724748491 chr10 19940355 19940689 + 14.889724748491 NA intron (NM_008580, intron 1 of 29) intron (NM_008580, intron 1 of 29) 5996 NM_008580 26408 Mm.6595 NM_008580 ENSMUSG00000071369 Map3k5 7420452D20Rik|ASK|ASK1|MAPKKK5|Mekk5 mitogen-activated protein kinase kinase kinase 5 protein-coding common_peak1_67_748_-0.692061025111867_9.20279139590282_14.8869476862072 chr5 138255723 138256557 + 14.8869476862072 NA intron (NM_001081108, intron 1 of 3) intron (NM_001081108, intron 1 of 3) 658 NM_001081108 66096 Mm.206901 NM_001081108 ENSMUSG00000050552 Lamtor4 0910001L09Rik|AV006840 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 protein-coding common_peak2_692_6993_0.193088492381918_12.8684463268887_14.8860856464908 chr13 111804569 111810243 + 14.8860856464908 NA intron (NM_011945, intron 1 of 19) intron (NM_011945, intron 1 of 19) 1577 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding common_peak1_161_1804_-0.424828727595299_10.6053687579769_14.8809563357333 chr11 97434573 97436720 + 14.8809563357333 NA Intergenic Intergenic -14514 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_243_1709_0.377963463646422_10.9287623415965_14.8799522157174 chr5 121544879 121546854 + 14.8799522157174 NA promoter-TSS (NM_010765) promoter-TSS (NM_010765) 26 NM_010765 17165 Mm.272206 NM_010765 ENSMUSG00000029454 Mapkapk5 MK5|PRAK MAP kinase-activated protein kinase 5 protein-coding common_peak2_69_259_0.885690212681435_8.46521291936917_14.8743896548961 chr4 59326046 59327699 + 14.8743896548961 NA intron (NM_001163288, intron 14 of 16) intron (NM_001163288, intron 14 of 16) 66821 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_24_306_-1.17607965323379_7.67405501875328_14.8716930685582 chr2 11173306 11173781 + 14.8716930685582 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 1161 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak2_80_887_-0.628073783357227_9.48037897467149_14.871086370551 chr4 150798296 150800539 + 14.871086370551 NA Intergenic Intergenic 55532 NR_040649 73348 Mm.396218 NR_040649 ENSMUSG00000078492 1700045H11Rik - RIKEN cDNA 1700045H11 gene ncRNA common_peak2_37_85_1.40071175988115_7.12662063464267_14.8646335776258 chr9 59941149 59941904 + 14.8646335776258 NA Intergenic Intergenic 8553 NM_013708 23958 Mm.103641 NM_013708 ENSMUSG00000032292 Nr2e3 A930035N01Rik|PNR|RNR|rd7 nuclear receptor subfamily 2, group E, member 3 protein-coding common_peak2_172_1933_-0.408161547984292_10.7132913054847_14.8624791541781 chr17 50469326 50472320 + 14.8624791541781 NA Intergenic Intergenic -38724 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding unique_peak1_18_15_2.60036420339689_5.30018210169844_14.8621980806305 chr15 80680572 80681013 + 14.8621980806305 NA intron (NM_145986, intron 1 of 4) intron (NM_145986, intron 1 of 4) 8945 NM_145986 213956 Mm.132439 NM_145986 ENSMUSG00000022408 Fam83f AW544981 family with sequence similarity 83, member F protein-coding unique_peak1_14_6_3.37468919935374_4.49469952173448_14.8613357322688 chr13 94333263 94333669 + 14.8613357322688 NA Intergenic L1VL4|LINE|L1 25457 NR_045619 328309 Mm.174191 NM_183205 Gm9776 A530089L17|ENSMUSG00000042857 predicted gene 9776 ncRNA unique_peak1_14_6_3.37468919935374_4.49469952173448_14.8613357322688-3 chr5 106630087 106630538 + 14.8613357322688 NA intron (NM_026856, intron 5 of 6) B4A|SINE|B4 66518 NM_026856 52397 Mm.249474 NM_026856 ENSMUSG00000049606 Zfp644 1110068L01Rik|AA408882|BM-005|D5Ertd689e|Zep-2 zinc finger protein 644 protein-coding unique_peak1_14_6_3.37468919935374_4.49469952173448_14.8613357322688-2 chr16 92886282 92886630 + 14.8613357322688 NA Intergenic Lx8|LINE|L1 -60382 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_1_73_-3.59303703606285_4.41293484759753_14.8613357322687 chr13 23518678 23519398 + 14.8613357322687 NA Intergenic Intergenic -12006 NM_153173 69386 Mm.158272 NM_153173 ENSMUSG00000060981 Hist1h4h 1700024H08Rik histone cluster 1, H4h protein-coding common_peak1_183_1146_0.454648061636755_10.3909737068342_14.8595139600245 chr1 162570010 162571737 + 14.8595139600245 NA promoter-TSS (NM_016796) promoter-TSS (NM_016796) 45 NM_016796 53330 Mm.10699 NM_016796 ENSMUSG00000026696 Vamp4 D1Ertd147e vesicle-associated membrane protein 4 protein-coding common_peak1_75_297_0.834420305307441_8.63637867311588_14.8586036890319 chr2 31572114 31573292 + 14.8586036890319 NA promoter-TSS (NM_001033389) promoter-TSS (NM_001033389) 52 NM_001290548 320267 Mm.207261 NM_001033389 ENSMUSG00000026843 Fubp3 A330051M14Rik|AV006371|FBP3|Marta2 far upstream element (FUSE) binding protein 3 protein-coding common_peak1_74_822_-0.654598912131959_9.35744916435565_14.85591902404 chr7 79392057 79392842 + 14.85591902404 NA intron (NM_145946, intron 1 of 37) CpG 111 NM_145946 208836 Mm.349493 NM_145946 ENSMUSG00000039187 Fanci - Fanconi anemia, complementation group I protein-coding common_peak2_108_527_0.647348116171182_9.36806817744404_14.8552232129468 chr2 164496726 164498154 + 14.8552232129468 NA promoter-TSS (NM_133779) promoter-TSS (NM_133779) -85 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak1_146_1628_-0.44876013546155_10.4453908207947_14.8523274727353 chr11 60877928 60879673 + 14.8523274727353 NA 5' UTR (NM_001168507, exon 1 of 3) 5' UTR (NM_001168507, exon 1 of 3) 238 NM_173453 216821 Mm.28063 NM_173453 ENSMUSG00000043284 Tmem11 5730466P16Rik|AA409091 transmembrane protein 11 protein-coding common_peak1_139_769_0.545955701313982_9.86169248623925_14.8433886873537 chr2 29251474 29253245 + 14.8433886873537 NA intron (NR_029460, intron 1 of 1) CpG 634 NR_029460 76220 Mm.330108 NR_029460 ENSMUSG00000079499 6530402F18Rik mKIAA1857 RIKEN cDNA 6530402F18 gene ncRNA common_peak1_26_325_-1.12652058739148_7.78546786053534_14.8371602984376 chr10 81507061 81507697 + 14.8371602984376 NA intron (NM_010304, intron 6 of 6) ZP3AR|Satellite|Satellite -7242 NM_010102 13611 Mm.33065 NM_010102 ENSMUSG00000044199 S1pr4 Edg6|Lpc1|S1p4 sphingosine-1-phosphate receptor 4 protein-coding common_peak1_26_325_-1.12652058739148_7.78546786053534_14.8371602984376-2 chr3 139042673 139043210 + 14.8371602984376 NA intron (NM_145544, intron 2 of 13) intron (NM_145544, intron 2 of 13) 32260 NM_145544 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding common_peak2_41_104_1.28984143731873_7.35916623632549_14.8370385256345 chr17 56161795 56162463 + 14.8370385256345 NA promoter-TSS (NM_025566) promoter-TSS (NM_025566) -362 NM_025566 66443 Mm.2312 NM_025566 ENSMUSG00000044469 Tnfaip8l1 2600017J23Rik|TIPE1 tumor necrosis factor, alpha-induced protein 8-like 1 protein-coding common_peak2_93_1028_-0.577283868281594_9.71838533275317_14.8355690120115 chr12 87146460 87148437 + 14.8355690120115 NA promoter-TSS (NM_010363) promoter-TSS (NM_010363) -259 NM_001252556 14874 Mm.29652 NM_010363 ENSMUSG00000021033 Gstz1 MAAI glutathione transferase zeta 1 (maleylacetoacetate isomerase) protein-coding common_peak1_18_246_-1.34800302818779_7.27436571749078_14.8353299049962 chr8 120743454 120743967 + 14.8353299049962 NA exon (NM_001301811, exon 3 of 9) exon (NM_001301811, exon 3 of 9) 5071 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_35_415_-0.969142045082069_8.21586869560006_14.8332518285344 chr4 46527136 46527798 + 14.8332518285344 NA intron (NM_029077, intron 2 of 5) intron (NM_029077, intron 2 of 5) 8674 NM_029077 74735 Mm.240252 NM_029077 ENSMUSG00000039853 Trim14 5830400N10Rik|pub tripartite motif-containing 14 protein-coding common_peak1_26_40_1.86465556222151_6.28987978572884_14.8315718339606 chr9 59941215 59941580 + 14.8315718339606 NA Intergenic Intergenic 8682 NM_013708 23958 Mm.103641 NM_013708 ENSMUSG00000032292 Nr2e3 A930035N01Rik|PNR|RNR|rd7 nuclear receptor subfamily 2, group E, member 3 protein-coding common_peak2_227_1555_0.394096996936694_10.8006748434545_14.8285970451771 chr6 50413013 50417038 + 14.8285970451771 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -32188 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak2_59_663_-0.739770687562865_9.00515408756549_14.826765093518 chr1 135658852 135660923 + 14.826765093518 NA Intergenic Intergenic -69310 NM_007791 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak1_90_398_0.732100106497702_9.0062949894712_14.826765093518 chr12 117843541 117844523 + 14.826765093518 NA intron (NM_146040, intron 1 of 9) CpG 171 NM_146040 217946 Mm.281149 NM_146040 ENSMUSG00000021175 Cdca7l BC006933|JPO2 cell division cycle associated 7 like protein-coding common_peak1_48_548_-0.823786102094514_8.68876928795794_14.8265444392295 chr11 118147405 118148482 + 14.8265444392295 NA Intergenic RMER4B|LTR|ERVK -18724 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak2_251_1789_0.369089910172875_10.9902888272381_14.8238600192171 chr14 60739463 60747075 + 14.8238600192171 NA intron (NM_001310594, intron 1 of 9) intron (NM_001310594, intron 1 of 9) 10365 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak2_194_2197_-0.380926634463052_10.9115123537177_14.8237559025129 chr6 48800824 48805211 + 14.8237559025129 NA Intergenic ORR1B2-int|LTR|ERVL-MaLR -32166 NM_031247 83408 Mm.333050 NM_031247 ENSMUSG00000039264 Gimap3 2010110D23Rik|Gimap5|Ian4 GTPase, IMAP family member 3 protein-coding common_peak2_35_76_1.46451113236412_6.99904210687696_14.8176678024675 chr17 50292463 50293337 + 14.8176678024675 NA intron (NM_001277863, intron 1 of 9) CpG 720 NM_010021 13164 Mm.280641 NM_010021 ENSMUSG00000010592 Dazl Daz-like|Dazh|Dazl1|Dazla|Tpx-2|Tpx2 deleted in azoospermia-like protein-coding common_peak2_379_3144_0.28285011088127_11.7602693572073_14.8149726483253 chr11 121701498 121704946 + 14.8149726483253 NA intron (NM_144797, intron 1 of 3) intron (NM_144797, intron 1 of 3) 795 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak1_14_207_-1.51839559672974_6.94124191977622_14.8136103041326 chr11 96076131 96076580 + 14.8136103041326 NA promoter-TSS (NM_007506) promoter-TSS (NM_007506) -661 NM_007506 11951 Mm.258 NM_007506 ENSMUSG00000006057 Atp5g1 - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) protein-coding common_peak1_40_99_1.3175870752907_7.30264972742008_14.811413285315 chr8 124287624 124288432 + 14.811413285315 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 56634 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak2_8_147_-1.93138031494264_6.24376320815763_14.8103694466473-2 chr19 60755889 60756774 + 14.8103694466473 NA exon (NM_178421, exon 1 of 1) exon (NM_178421, exon 1 of 1) 344 NM_178421 332397 Mm.186390 NM_178421 ENSMUSG00000072437 Nanos1 NOS-1 nanos homolog 1 (Drosophila) protein-coding unique_peak2_8_147_-1.93138031494264_6.24376320815763_14.8103694466473 chr12 24708070 24708725 + 14.8103694466473 NA exon (NM_009104, exon 1 of 10) exon (NM_009104, exon 1 of 10) 143 NM_009104 20135 Mm.99 NM_009104 ENSMUSG00000020649 Rrm2 AA407299|R2 ribonucleotide reductase M2 protein-coding common_peak2_59_200_0.984217052605132_8.14316021748149_14.809121195779 chr18 84851264 84852131 + 14.809121195779 NA intron (NM_025797, intron 1 of 4) intron (NM_025797, intron 1 of 4) 283 NM_025797 109672 Mm.31018 NM_025797 ENSMUSG00000024646 Cyb5a 0610009N12Rik|Cyb5 cytochrome b5 type A (microsomal) protein-coding common_peak1_50_569_-0.807147331924648_8.75124444308978_14.8090767081298 chr1 171037834 171038627 + 14.8090767081298 NA Intergenic CpG 19304 NM_144559 246256 Mm.251254 NM_144559 ENSMUSG00000059089 Fcgr4 4833442P21Rik|CD16-2|FcgRIV|FcgammaRIV|Fcgr3a|Fcrl3 Fc receptor, IgG, low affinity IV protein-coding unique_peak2_22_286_-1.22644612258218_7.5516838653846_14.8064794291816 chr14 121829485 121831288 + 14.8064794291816 NA Intergenic ORR1D2|LTR|ERVL-MaLR -32652 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak1_27_335_-1.10575267276083_7.83944108639834_14.8031929349403 chr1 34801665 34802219 + 14.8031929349403 NA 5' UTR (NM_183019, exon 1 of 10) 5' UTR (NM_183019, exon 1 of 10) 220 NM_183019 226970 Mm.41604 NM_183019 ENSMUSG00000037509 Arhgef4 9330140K16Rik|Asef|ENSMUSG00000070955 Rho guanine nucleotide exchange factor (GEF) 4 protein-coding common_peak1_46_129_1.18076327439756_7.61274945022724_14.7981923040347 chr1 54844138 54845087 + 14.7981923040347 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 81775 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_72_800_-0.663339406023082_9.31398872939717_14.7965663649102 chr9 65580271 65581125 + 14.7965663649102 NA promoter-TSS (NM_153119) promoter-TSS (NM_153119) -611 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding unique_peak2_4_106_-2.50355738114308_5.48968829582961_14.7947679638239 chrX 48314343 48315305 + 14.7947679638239 NA Intergenic CpG -26534 NM_178782 320376 Mm.210146 NM_178782 ENSMUSG00000036959 Bcorl1 6720425J07Rik|B930011H20Rik BCL6 co-repressor-like 1 protein-coding common_peak2_42_486_-0.882050791828391_8.48675256616815_14.7862427549847 chrX 37109548 37110439 + 14.7862427549847 NA intron (NM_026573, intron 1 of 9) intron (NM_026573, intron 1 of 9) 329 NM_026573 68134 Mm.271160 NM_026573 ENSMUSG00000036572 Upf3b 5730594O13Rik|AI317193|AW541158|RENT3B|UPF3X UPF3 regulator of nonsense transcripts homolog B (yeast) protein-coding common_peak1_33_395_-0.999208047919083_8.12975259612007_14.7859447036319 chr6 117905853 117906455 + 14.7859447036319 NA promoter-TSS (NM_001166431) promoter-TSS (NM_001166431) -628 NM_001166431 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_36_81_1.42223164659333_7.06866782791475_14.7828198268315 chr2 173410299 173410866 + 14.7828198268315 NA Intergenic Intergenic -112010 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding common_peak2_384_3201_0.28006953513513_11.7847923600838_14.7808991499156 chr15 5236259 5245304 + 14.7808991499156 NA intron (NM_001136079, intron 2 of 2) intron (NM_001136079, intron 2 of 2) 3406 NM_001136079 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak2_242_1701_0.377461277460201_10.9217459604161_14.7798343255876 chr5 121544887 121546755 + 14.7798343255876 NA promoter-TSS (NM_010765) promoter-TSS (NM_010765) 71 NM_010765 17165 Mm.272206 NM_010765 ENSMUSG00000029454 Mapkapk5 MK5|PRAK MAP kinase-activated protein kinase 5 protein-coding common_peak1_38_445_-0.927956450312444_8.33692167476408_14.7775358355344 chr1 125435786 125436459 + 14.7775358355344 NA promoter-TSS (NM_001205386) promoter-TSS (NM_001205386) -395 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak1_128_1419_-0.481813527984812_10.2307684503996_14.7726639811071 chr7 12977430 12979029 + 14.7726639811071 NA intron (NM_001168561, intron 1 of 4) CpG 381 NM_001168561 269870 Mm.62083 NM_175558 ENSMUSG00000033961 Zfp446 A630035I11Rik|A930031C22|AA120513|AV306632 zinc finger protein 446 protein-coding common_peak1_280_3269_-0.307483433184384_11.5213332037933_14.7702717132295 chr11 68450413 68453729 + 14.7702717132295 NA intron (NM_177320, intron 1 of 18) intron (NM_177320, intron 1 of 18) 19946 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak1_19_255_-1.30886577236922_7.34556711381539_14.7696250601534 chr6 145115592 145116080 + 14.7696250601534 NA intron (NM_001281980, intron 1 of 18) intron (NM_001281980, intron 1 of 18) 200 NM_001281981 16970 Mm.843 NM_008511 ENSMUSG00000030263 Lrmp D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1 lymphoid-restricted membrane protein protein-coding common_peak1_102_484_0.669706946702249_9.25669441042561_14.76942835683 chr11 101301465 101302408 + 14.76942835683 NA intron (NM_019584, intron 1 of 11) CpG 331 NM_019584 56208 Mm.178947 NM_019584 ENSMUSG00000035086 Becn1 4921513J16Rik|5430417M23Rik|Atg6 beclin 1, autophagy related protein-coding common_peak2_138_1533_-0.461097986710332_10.3525337741478_14.7639718785196 chr6 125163611 125166643 + 14.7639718785196 NA intron (NM_001289726, intron 2 of 6) CpG 646 NM_008084 14433 Mm.304088 NM_008084 ENSMUSG00000057666 Gapdh Gapd glyceraldehyde-3-phosphate dehydrogenase protein-coding common_peak1_17_236_-1.38405788702559_7.19671430538546_14.760722860037 chr7 31000805 31001263 + 14.760722860037 NA Intergenic MIRb|SINE|MIR 19113 NM_001242647 76415 Mm.259739 NM_175240 ENSMUSG00000046826 Fam187b 1700020B09Rik|Tmem162 family with sequence similarity 187, member B protein-coding common_peak2_131_1453_-0.475266983886003_10.2681780619766_14.7591946946725 chr3 95314489 95316706 + 14.7591946946725 NA intron (NM_029789, intron 1 of 10) CpG 345 NM_029789 76893 Mm.181009 NM_029789 ENSMUSG00000015714 Cers2 0610013I17Rik|AI225939|Lass2|TRH3 ceramide synthase 2 protein-coding common_peak1_51_579_-0.797875534187646_8.78097132292111_14.753804461312 chr11 46389068 46389614 + 14.753804461312 NA exon (NM_010583, exon 1 of 17) exon (NM_010583, exon 1 of 17) 174 NM_001281968 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding common_peak2_62_693_-0.717182692626478_9.08020050626502_14.7479839194513 chr15 62168549 62170698 + 14.7479839194513 NA intron (NR_003368, intron 4 of 8) intron (NR_003368, intron 4 of 8) 49828 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_132_714_0.562100880996608_9.76284987216406_14.7410616855715 chr18 66470173 66472208 + 14.7410616855715 NA Intergenic Intergenic 12586 NM_021451 58801 Mm.271878 NM_021451 ENSMUSG00000024521 Pmaip1 Noxa phorbol-12-myristate-13-acetate-induced protein 1 protein-coding common_peak2_128_682_0.574119918117143_9.70280172734866_14.7387945684089 chr11 72300750 72302644 + 14.7387945684089 NA promoter-TSS (NM_001037713) promoter-TSS (NM_001037713) 68 NM_001037713 327959 Mm.291131 NM_001037713 ENSMUSG00000040483 Xaf1 Fbox39 XIAP associated factor 1 protein-coding common_peak1_128_682_0.574119918117143_9.70280172734866_14.7387945684089 chr3 133543839 133545386 + 14.7387945684089 NA promoter-TSS (NM_001040400) promoter-TSS (NM_001040400) -222 NM_001040400 214133 Mm.347816 NM_145989 ENSMUSG00000040943 Tet2 Ayu17-449|E130014J05Rik|mKIAA1546 tet methylcytosine dioxygenase 2 protein-coding common_peak2_68_254_0.888241883387937_8.43847437855283_14.7372075962001 chr10 121350881 121352204 + 14.7372075962001 NA Intergenic CpG -13548 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding common_peak1_53_166_1.0651155855519_7.91626208525_14.7347714298038 chr18 68226718 68227519 + 14.7347714298038 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) 33855 NR_106078 102465702 NR_106078 ENSMUSG00000098253 Mir7219 Gm27613|mmu-mir-7219 microRNA 7219 ncRNA common_peak2_52_588_-0.786382058387348_8.80893279463679_14.7344086366207 chr2 156064720 156066253 + 14.7344086366207 NA exon (NM_139151, exon 1 of 12) exon (NM_139151, exon 1 of 12) 273 NM_139151 245865 Mm.330713 NM_139151 ENSMUSG00000038180 Spag4 1700041K21Rik|MNCb-0953|Sun4|mKIAA4118 sperm associated antigen 4 protein-coding common_peak2_215_2452_-0.358287018158938_11.0811880094781_14.7334627506153 chr15 102404296 102407449 + 14.7334627506153 NA promoter-TSS (NM_013672) promoter-TSS (NM_013672) -444 NM_013672 20683 Mm.4618 NM_013672 ENSMUSG00000001280 Sp1 1110003E12Rik|AA450830|AI845540|Sp1-1 trans-acting transcription factor 1 protein-coding common_peak1_45_124_1.19928883061778_7.56542869997098_14.7317627452688 chr9 41075313 41076385 + 14.7317627452688 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) -71221 NM_019465 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak1_143_1591_-0.452102325111914_10.4105734579877_14.7301761705875 chr8 104247159 104248833 + 14.7301761705875 NA intron (NR_045642, intron 1 of 8) intron (NR_045642, intron 1 of 8) 562 NR_045642 57813 Mm.183110 NM_021028 ENSMUSG00000035824 Tk2 AU024611|mt-TK thymidine kinase 2, mitochondrial protein-coding common_peak1_59_662_-0.737596316328528_9.00406690194832_14.7300599132367-2 chr12 32820353 32821331 + 14.7300599132367 NA intron (NM_021524, intron 1 of 10) CpG 507 NM_021524 59027 Mm.202727 NM_021524 ENSMUSG00000020572 Nampt 1110035O14Rik|AI314458|AI480535|NAmPRTase|Pbef|Pbef1|Visfatin nicotinamide phosphoribosyltransferase protein-coding common_peak1_59_662_-0.737596316328528_9.00406690194832_14.7300599132367 chr1 132012068 132012832 + 14.7300599132367 NA intron (NM_007923, intron 1 of 4) B1_Mur4|SINE|Alu 4845 NM_007923 13714 Mm.254233 NM_007923 ENSMUSG00000026436 Elk4 2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1 ELK4, member of ETS oncogene family protein-coding common_peak1_41_476_-0.893758501020656_8.45096620549518_14.728525596513 chr14 79531726 79532508 + 14.728525596513 NA intron (NM_001286411, intron 1 of 8) intron (NM_001286411, intron 1 of 8) 16443 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding unique_peak2_6_127_-2.16665987235478_5.91667006382261_14.7268864764253 chr3 35753138 35754020 + 14.7268864764253 NA promoter-TSS (NM_029570) promoter-TSS (NM_029570) -559 NM_029570 76295 Mm.239416 NM_029570 ENSMUSG00000037400 Atp11b 1110019I14Rik|ATPIF|ATPIR|mKIAA0956 ATPase, class VI, type 11B protein-coding unique_peak1_23_30_2.05957915770522_5.98398588923948_14.7223668094782 chr6 85431982 85432364 + 14.7223668094782 NA intron (NM_144918, intron 1 of 12) CpG 197 NM_144918 232187 Mm.219946 NM_144918 ENSMUSG00000033706 Smyd5 AW536703|NN8-4AG|Rai15|Rrg1 SET and MYND domain containing 5 protein-coding common_peak2_131_706_0.564978165224192_9.7480554874215_14.7200969514529 chr8 124255089 124257884 + 14.7200969514529 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 25092 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_123_643_0.588989948992401_9.62541185261082_14.7163381583243 chr14 56574640 56576749 + 14.7163381583243 NA promoter-TSS (NM_001145978) promoter-TSS (NM_001145978) 75 NM_001145978 328417 Mm.379357 NM_001145978 ENSMUSG00000054509 Parp4 Adprtl1|C030027K23Rik|E230037B21Rik|Gm743|PARPL|PH5P|VAULT3|VPARP|p193 poly (ADP-ribose) polymerase family, member 4 protein-coding common_peak2_75_298_0.829587151571499_8.63879524998385_14.7148279639117 chr7 19010997 19012784 + 14.7148279639117 NA Intergenic Intergenic 7825 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding common_peak1_46_527_-0.841263031932437_8.62376260339224_14.7147413441055 chr7 135588900 135589433 + 14.7147413441055 NA intron (NM_001316678, intron 1 of 19) intron (NM_001316678, intron 1 of 19) -4315 NM_001316680 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak2_165_989_0.484833465387732_10.1937014476608_14.7120917467225 chr9 45983636 45985775 + 14.7120917467225 NA 5' UTR (NM_008775, exon 1 of 6) 5' UTR (NM_008775, exon 1 of 6) 166 NM_008775 18475 Mm.200859 NM_008775 ENSMUSG00000003131 Pafah1b2 AI747451|AU021353|Pafahb|mus[b] platelet-activating factor acetylhydrolase, isoform 1b, subunit 2 protein-coding common_peak1_114_1259_-0.51264162741545_10.0428872046796_14.7076789386203 chr11 6388520 6390051 + 14.7076789386203 NA Intergenic Intergenic -5840 NM_001005867 52915 Mm.1144 NM_028601 ENSMUSG00000041164 Zmiz2 Zimp7 zinc finger, MIZ-type containing 2 protein-coding common_peak2_33_68_1.52162411538236_6.86933651446935_14.7068072342264 chr18 32969668 32970365 + 14.7068072342264 NA intron (NM_009793, intron 1 of 10) intron (NM_009793, intron 1 of 10) 30975 NM_009793 12326 Mm.222329 NM_009793 ENSMUSG00000038128 Camk4 A430110E23Rik|AI666733|CaMKIV|CaMKIV/Gr|D18Bwg0362e calcium/calmodulin-dependent protein kinase IV protein-coding common_peak2_33_68_1.52162411538236_6.86933651446935_14.7068072342264-2 chr2 128312059 128312664 + 14.7068072342264 NA intron (NR_028589, intron 2 of 2) intron (NR_028589, intron 2 of 2) 116990 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_240_1683_0.378175072188254_10.9067639591605_14.7010425461413 chr11 19986496 19990493 + 14.7010425461413 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 64052 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak2_283_2114_0.339942220212416_11.2164130581135_14.700578309398 chr17 24413278 24416204 + 14.700578309398 NA promoter-TSS (NM_009070) promoter-TSS (NM_009070) 66 NM_001080128 19826 Mm.1951 NM_009070 ENSMUSG00000034681 Rnps1 - ribonucleic acid binding protein S1 protein-coding common_peak2_26_324_-1.12208834107622_7.78325173737771_14.7002356761136 chr8 70593664 70595156 + 14.7002356761136 NA promoter-TSS (NM_023627) promoter-TSS (NM_023627) -71 NM_023627 71780 Mm.29357 NM_023627 ENSMUSG00000019139 Isyna1 1300017C10Rik|AU018670 myo-inositol 1-phosphate synthase A1 protein-coding common_peak2_82_906_-0.615452871360175_9.51723230484843_14.6998645570242 chr19 11036632 11039022 + 14.6998645570242 NA Intergenic L1_Mus3|LINE|L1 12739 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA common_peak1_97_1070_-0.561254216653216_9.78411565642365_14.6973580926272 chr17 6778370 6779412 + 14.6973580926272 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 3889 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_503_4596_0.234969142694045_12.2839615221638_14.6963943654878 chr3 51275053 51278480 + 14.6963943654878 NA promoter-TSS (NR_073429) promoter-TSS (NR_073429) 5 NR_073429 67746 Mm.441177 NR_073429 ENSMUSG00000087440 4930577N17Rik - RIKEN cDNA 4930577N17 gene ncRNA unique_peak2_12_186_-1.61808552643306_6.73785169667111_14.6938190297192 chr4 88864247 88865457 + 14.6938190297192 NA Intergenic Intergenic 14765 NM_010502 15962 Mm.57127 NM_010502 ENSMUSG00000095498 Ifna1 Ifa1 interferon alpha 1 protein-coding common_peak2_127_1406_-0.482316416552298_10.2172484049604_14.6936294958742 chr13 46774360 46778211 + 14.6936294958742 NA intron (NM_010617, intron 27 of 37) ID_B1|SINE|B4 -48436 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak2_189_2134_-0.384938253046284_10.8675512279847_14.6891860933627 chr11 23305252 23307721 + 14.6891860933627 NA promoter-TSS (NM_001190401) promoter-TSS (NM_001190401) -409 NM_001190401 17847 Mm.119155 NM_001190401 ENSMUSG00000056342 Usp34 A530081C03Rik|Murr2 ubiquitin specific peptidase 34 protein-coding common_peak2_111_551_0.631264915612469_9.4241569145844_14.6874020777123 chr15 79108376 79110000 + 14.6874020777123 NA 5' UTR (NM_177461, exon 1 of 16) 5' UTR (NM_177461, exon 1 of 16) 205 NM_177461 27008 Mm.196480 NM_177461 ENSMUSG00000033039 Micall1 AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668 microtubule associated monooxygenase, calponin and LIM domain containing -like 1 protein-coding common_peak2_53_598_-0.777592314762835_8.83761603540737_14.6863878071775 chr5 36725831 36727636 + 14.6863878071775 NA Intergenic Intergenic 21946 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding common_peak2_218_1471_0.402891586481902_10.725007749298_14.6858329306338 chr13 45962763 45966419 + 14.6858329306338 NA intron (NM_009124, intron 1 of 7) CpG 400 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1 ataxin 1 protein-coding unique_peak1_28_48_1.73395347039736_6.48168657931389_14.6809199248242 chr11 90238205 90238822 + 14.6809199248242 NA Intergenic MIR|SINE|MIR -10963 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak1_47_536_-0.828390498706961_8.65458302863193_14.6801027982927 chr9 57645970 57646825 + 14.6801027982927 NA promoter-TSS (NM_007783) promoter-TSS (NM_007783) -744 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak1_89_982_-0.588256657589593_9.64691927754578_14.6779536002351 chr11 51938294 51939783 + 14.6779536002351 NA Intergenic ID4|SINE|ID -28593 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak2_159_938_0.49598981353607_10.1229762544218_14.67457233112 chr11 20542079 20544105 + 14.67457233112 NA promoter-TSS (NM_021372) promoter-TSS (NM_021372) -161 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding common_peak1_32_64_1.55495213463243_6.79984388034467_14.6688243586054 chr17 50292545 50293237 + 14.6688243586054 NA intron (NM_001277863, intron 1 of 9) CpG 729 NM_010021 13164 Mm.280641 NM_010021 ENSMUSG00000010592 Dazl Daz-like|Dazh|Dazl1|Dazla|Tpx-2|Tpx2 deleted in azoospermia-like protein-coding common_peak1_125_659_0.581899256892322_9.65727184269198_14.6684244916844 chr1 136624920 136625907 + 14.6684244916844 NA exon (NM_177643, exon 2 of 2) exon (NM_177643, exon 2 of 2) 512 NM_001160251 226442 Mm.62521 NM_177643 ENSMUSG00000041483 Zfp281 Znf281 zinc finger protein 281 protein-coding common_peak1_27_334_-1.10145253532721_7.83729101768153_14.6684059154017 chrX 48148131 48148904 + 14.6684059154017 NA intron (NM_028773, intron 1 of 7) intron (NM_028773, intron 1 of 7) 2081 NM_028773 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding common_peak1_196_2218_-0.376587335571712_10.9274002844112_14.6675486104718 chr2 181364669 181366426 + 14.6675486104718 NA promoter-TSS (NM_001165991) promoter-TSS (NM_001165991) 124 NM_001048148 229007 Mm.87720 NM_144894 ENSMUSG00000027582 Zgpat 1500006I01Rik|BC021513 zinc finger, CCCH-type with G patch domain protein-coding common_peak2_146_1625_-0.446100789011059_10.4440611475695_14.6664537183418 chr13 19355315 19359111 + 14.6664537183418 NA TTS (NM_024270) TTS (NM_024270) 38600 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak1_39_455_-0.915143475347609_8.37531827649094_14.6641946853969 chr5 31713664 31714291 + 14.6641946853969 NA intron (NM_181281, intron 2 of 10) Lx8|LINE|L1 15927 NM_181282 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Bre 6030405P19Rik|AI429776|B830038C02Rik brain and reproductive organ-expressed protein protein-coding common_peak1_275_2033_0.345715978762005_11.1629619532385_14.6631136617268 chr2 156884552 156887578 + 14.6631136617268 NA intron (NM_029983, intron 1 of 7) intron (NM_029983, intron 1 of 7) 1013 NM_029983 77799 Mm.29264 NM_029983 ENSMUSG00000027636 Sla2 A930009E21Rik|AI430952|SLAP-2|SLAP2 Src-like-adaptor 2 protein-coding common_peak2_173_1060_0.468201200937443_10.2853095413835_14.6624938314221 chr7 101315662 101318097 + 14.6624938314221 NA Intergenic Intergenic -4440 NM_019990 56018 Mm.28896 NM_019990 ENSMUSG00000030688 Stard10 AV048538|CGI-52|NY-C0-28|PC-TP2|PCTP2|Pctpl|Sdccag28|SdccagG28|TISP-81 START domain containing 10 protein-coding common_peak1_103_1136_-0.542370671878604_9.87983120295295_14.6591831964409 chr17 26933054 26933985 + 14.6591831964409 NA TTS (NM_053173) TTS (NM_053173) 392 NR_126158 21652 Mm.258953 NM_009343 ENSMUSG00000024193 Phf1 AW557215|D17Ertd455e|Pcl1|Phf2|Tctex3 PHD finger protein 1 protein-coding common_peak1_70_777_-0.670466799139176_9.2683929454166_14.6530968334534 chr4 132535566 132536643 + 14.6530968334534 NA promoter-TSS (NM_007512) promoter-TSS (NM_007512) 545 NM_172400 68598 Mm.29685 NM_172400 ENSMUSG00000054405 Dnajc8 1110021D09Rik|2010009J04Rik|AL024084|AU019262|AU044514 DnaJ heat shock protein family (Hsp40) member C8 protein-coding common_peak1_13_196_-1.56209938062481_6.84100212914397_14.6527587693093 chr8 105827456 105827727 + 14.6527587693093 NA promoter-TSS (NM_024445) promoter-TSS (NM_024445) -153 NM_024445 72236 Mm.386810 NM_024445 ENSMUSG00000031893 Tsnaxip1 1700016K08Rik|TXI1 translin-associated factor X (Tsnax) interacting protein 1 protein-coding common_peak2_657_6540_0.197984008783783_12.774287503486_14.6522189803641 chr19 5795964 5804842 + 14.6522189803641 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) 2268 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA unique_peak1_29_52_1.6807359780345_6.56828844358045_14.6478192083422 chrX 103356454 103357108 + 14.6478192083422 NA exon (NM_009767, exon 1 of 6) exon (NM_009767, exon 1 of 6) 305 NM_009767 12212 Mm.42223 NM_009767 ENSMUSG00000031327 Chic1 Brx|ENSMUSG00000073019|Gm10454 cysteine-rich hydrophobic domain 1 protein-coding common_peak1_71_787_-0.664141835210996_9.28998090185088_14.647293522306 chr2 30048729 30049473 + 14.647293522306 NA promoter-TSS (NM_001008498) promoter-TSS (NM_001008498) -222 NM_001008498 71820 Mm.88053 NM_001008498 ENSMUSG00000039715 Wdr34 3200002I06Rik WD repeat domain 34 protein-coding common_peak1_161_1800_-0.421628071727042_10.6037684300428_14.6454044178703 chr11 106386780 106388659 + 14.6454044178703 NA Intergenic PB1D9|SINE|Alu -5078 NM_010494 15896 Mm.394 NM_010494 ENSMUSG00000001029 Icam2 CD102|Icam-2|Ly-60 intercellular adhesion molecule 2 protein-coding common_peak2_31_60_1.59212823674864_6.72680145593721_14.6447857677987 chr4 46304756 46305372 + 14.6447857677987 NA Intergenic CpG -39130 NM_183298 110805 Mm.354634 NM_183298 ENSMUSG00000070990 Foxe1 Titf2 forkhead box E1 protein-coding common_peak1_524_4854_0.228430237248583_12.3594706989308_14.6432812868527 chr12 98268062 98272449 + 14.6432812868527 NA intron (NM_008152, intron 1 of 1) intron (NM_008152, intron 1 of 1) 1620 NM_008152 14744 Mm.378924 NM_008152 ENSMUSG00000021886 Gpr65 Dig1|Gpcr25|TDAG8 G-protein coupled receptor 65 protein-coding common_peak2_280_2084_0.341759818869035_11.1967115777665_14.6408115265893 chr11 44518183 44521540 + 14.6408115265893 NA intron (NM_001166553, intron 1 of 5) intron (NM_001166553, intron 1 of 5) 484 NM_001166553 74315 Mm.156771 NM_028862 ENSMUSG00000019189 Rnf145 3732413I11Rik|TMRF1 ring finger protein 145 protein-coding common_peak2_135_739_0.551991734016928_9.80737732752478_14.6399507886445 chr14 75283568 75285141 + 14.6399507886445 NA promoter-TSS (NM_026083) promoter-TSS (NM_026083) -19 NM_026083 67302 Mm.74704 NM_026083 ENSMUSG00000022000 Zc3h13 2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618 zinc finger CCCH type containing 13 protein-coding common_peak1_592_5703_0.211461343299469_12.5834889380936_14.6374365874418 chr3 69155880 69161162 + 14.6374365874418 NA Intergenic Intergenic 27288 NR_126533 381452 Mm.331067 NM_001243000 ENSMUSG00000094763 Gm1647 - predicted gene 1647 ncRNA common_peak1_31_374_-1.02788121107172_8.03680617984738_14.634343225731 chr10 45018807 45019414 + 14.634343225731 NA Intergenic Intergenic -48104 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak2_59_661_-0.735418663023157_9.00297807529564_14.6336010553291 chr9 109081566 109083323 + 14.6336010553291 NA promoter-TSS (NM_025689) promoter-TSS (NM_025689) -52 NM_025689 66658 Mm.128227 NM_025689 ENSMUSG00000025645 Ccdc51 5730568A12Rik|AI551049 coiled-coil domain containing 51 protein-coding common_peak1_79_873_-0.627130619497111_9.45792415975204_14.633246088882 chr12 21475732 21477239 + 14.633246088882 NA Intergenic MTC-int|LTR|ERVL-MaLR -59049 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak2_264_1922_0.354704304981537_11.0864951998307_14.6302437596009 chr5 123977866 123982406 + 14.6302437596009 NA intron (NM_145070, intron 1 of 31) MLTR14|LTR|ERV1 6508 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding common_peak2_225_1539_0.393417173776495_10.7854232224705_14.6260556335733 chr4 109116288 109120339 + 14.6260556335733 NA promoter-TSS (NM_001134791) promoter-TSS (NM_001134791) -277 NM_001134791 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding unique_peak1_19_18_2.44320671418719_5.46953087053718_14.6257688992075-2 chr5 136908023 136908458 + 14.6257688992075 NA promoter-TSS (NM_026073) promoter-TSS (NM_026073) 90 NM_026073 67286 Mm.41779 NM_026073 ENSMUSG00000007987 Ift22 3110017O03Rik|AI835745|AI847427|Rabl5 intraflagellar transport 22 protein-coding unique_peak1_19_18_2.44320671418719_5.46953087053718_14.6257688992075 chr1 130512895 130513295 + 14.6257688992075 NA Intergenic Intergenic -50355 NM_010016 13136 Mm.101591 NM_010016 ENSMUSG00000026399 Cd55 Daf|Daf-GPI|Daf1|GPI-DAF CD55 molecule, decay accelerating factor for complement protein-coding common_peak2_134_1485_-0.46690524682068_10.3037657771283_14.6213904426657 chr11 117847621 117849355 + 14.6213904426657 NA promoter-TSS (NM_009689) promoter-TSS (NM_009689) -749 NM_001012273 11799 Mm.8552 NM_009689 ENSMUSG00000017716 Birc5 AAC-11|Api4|TIAP|survivin40 baculoviral IAP repeat-containing 5 protein-coding common_peak2_106_514_0.650541797285193_9.33369952071318_14.6181232250851 chr12 82393251 82395470 + 14.6181232250851 NA intron (NM_172579, intron 7 of 20) intron (NM_172579, intron 7 of 20) 83011 NM_172579 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak1_236_2709_-0.337843528974632_11.2351553717539_14.6171803431877 chr17 35978626 35980900 + 14.6171803431877 NA promoter-TSS (NM_008136) promoter-TSS (NM_008136) 62 NM_001282013 75210 Mm.40036 NM_145487 ENSMUSG00000038500 Prr3 4930540G07Rik|Cat56 proline-rich polypeptide 3 protein-coding common_peak1_48_546_-0.818520785881873_8.68613662985162_14.6144717257998 chr8 123112893 123113861 + 14.6144717257998 NA Intergenic RMER19A|LTR|ERVK -3997 NM_170684 102278 Mm.36434 NM_170684 ENSMUSG00000034796 Cpne7 AW047065 copine VII protein-coding common_peak1_256_2960_-0.322267126020877_11.3707352121671_14.6140288998608 chr4 62479728 62481416 + 14.6140288998608 NA intron (NM_138653, intron 1 of 6) MIR|SINE|MIR 505 NM_138653 192120 Mm.29808 NM_138653 ENSMUSG00000028392 Bspry - B-box and SPRY domain containing protein-coding common_peak1_130_1439_-0.474765834482801_10.2544701790883_14.6138302505095 chr7 66184443 66186354 + 14.6138302505095 NA Intergenic Intergenic 75883 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_72_280_0.847892706164702_8.55837267330328_14.6128956973382 chr5 114922920 114923880 + 14.6128956973382 NA intron (NM_145209, intron 1 of 6) intron (NM_145209, intron 1 of 6) 160 NM_145209 231655 Mm.95479 NM_145209 ENSMUSG00000041827 Oasl1 7530414C13Rik|oasl9 2'-5' oligoadenylate synthetase-like 1 protein-coding common_peak1_216_1453_0.404406760080182_10.7080149339597_14.6124214204209 chr8 70041818 70043587 + 14.6124214204209 NA promoter-TSS (NM_001167939) promoter-TSS (NM_001167939) 32 NM_001167939 74549 Mm.269061 NM_028993 ENSMUSG00000031858 Mau2 9130404D08Rik|A930019L04Rik|C77863|C79014|Mau-2|mKIAA0892 MAU2 sister chromatid cohesion factor protein-coding common_peak2_95_1047_-0.566422911072642_9.75021154600113_14.610047540821 chr15 100551074 100552629 + 14.610047540821 NA intron (NM_033476, intron 1 of 15) CpG 157 NM_033476 21422 Mm.219040 NM_033476 ENSMUSG00000009733 Tfcp2 CP-2|CP2|D230015P20Rik|LBP-1c|LBP-1d|LBP1|LSF|Tcfcp2|UBP-1 transcription factor CP2 protein-coding common_peak1_21_274_-1.24349006571807_7.48154277555299_14.6083125273907 chr8 70635395 70635879 + 14.6083125273907 NA Intergenic Intergenic -4002 NM_011819 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak1_60_671_-0.727797971731787_9.02841843691287_14.6064035395802 chr2 71055691 71056452 + 14.6064035395802 NA promoter-TSS (NM_145524) promoter-TSS (NM_145524) 327 NM_001165980 75763 Mm.281668 NM_198005 ENSMUSG00000041966 Dcaf17 2810055O12Rik|4833418A01Rik|A030004A10Rik|A930009G19Rik|AI448937 DDB1 and CUL4 associated factor 17 protein-coding common_peak2_250_1783_0.366897580893694_10.9843486903672_14.6063814592284 chr10 39516180 39523242 + 14.6063814592284 NA intron (NM_008054, intron 5 of 13) (CA)n|Simple_repeat|Simple_repeat -93223 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak1_146_1624_-0.445213249739211_10.4436173779336_14.6047220507327 chr4 102505697 102507767 + 14.6047220507327 NA intron (NM_019840, intron 5 of 14) intron (NM_019840, intron 5 of 14) -63328 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak1_173_1941_-0.403917343566983_10.7213688136357_14.5982518052124 chr5 124476637 124478441 + 14.5982518052124 NA intron (NM_030259, intron 1 of 3) B2_Mm2|SINE|B2 696 NM_030259 80291 Mm.425280 NM_030259 ENSMUSG00000029401 Rilpl2 - Rab interacting lysosomal protein-like 2 protein-coding common_peak2_290_2188_0.333416640335747_11.2627645593488_14.597055670072 chr5 134638267 134640475 + 14.597055670072 NA promoter-TSS (NM_033561) promoter-TSS (NM_033561) 38 NM_001312867 22384 Mm.27955 NM_033561 ENSMUSG00000040731 Eif4h AU018978|D5Ertd355e|E430026L18Rik|Ef4h|Wbscr1|Wscr1|eIF-4H eukaryotic translation initiation factor 4H protein-coding common_peak2_234_1626_0.383238138631809_10.8596176049884_14.5963151228697 chr11 75652972 75657193 + 14.5963151228697 NA promoter-TSS (NM_001080775) promoter-TSS (NM_001080775) -933 NM_001080775 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding common_peak1_214_1435_0.40599272330922_10.6908363954777_14.5962703060047 chr13 66932300 66933999 + 14.5962703060047 NA promoter-TSS (NM_025547) promoter-TSS (NM_025547) -77 NM_025547 66410 Mm.347939 NM_025547 ENSMUSG00000021519 Mterf3 2410017I18Rik|Mterfd1 mitochondrial transcription termination factor 3 protein-coding common_peak2_69_765_-0.673142556215067_9.24462930381742_14.5943238975848 chr1 180777068 180778557 + 14.5943238975848 NA Intergenic CpG 35793 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a H3.3A H3 histone, family 3A protein-coding common_peak2_69_765_-0.673142556215067_9.24462930381742_14.5943238975848-2 chrX 103621224 103622646 + 14.5943238975848 NA intron (NR_028380, intron 1 of 10) intron (NR_028380, intron 1 of 10) 1819 NR_028381 78878 Mm.259724 NR_028380 ENSMUSG00000086370 Ftx B230206F22Rik|BB219131|NCRNA00182|Thcytx Ftx transcript, Xist regulator (non-protein coding) ncRNA unique_peak1_17_13_2.69733043981506_5.15602014196514_14.5907125388533-4 chr2 58194141 58194584 + 14.5907125388533 NA Intergenic Intergenic 30388 NR_045895 100042926 Mm.446515 NR_045895 ENSMUSG00000086862 Gm13546 OTTMUSG00000012675 predicted gene 13546 ncRNA unique_peak1_17_13_2.69733043981506_5.15602014196514_14.5907125388533-3 chr17 59013075 59013526 + 14.5907125388533 NA promoter-TSS (NM_026497) promoter-TSS (NM_026497) 22 NM_026497 67993 Mm.36507 NM_026497 ENSMUSG00000024228 Nudt12 0610016O18Rik nudix (nucleoside diphosphate linked moiety X)-type motif 12 protein-coding unique_peak1_17_13_2.69733043981506_5.15602014196514_14.5907125388533 chr17 7879746 7880230 + 14.5907125388533 NA Intergenic Intergenic -46012 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding unique_peak1_17_13_2.69733043981506_5.15602014196514_14.5907125388533-2 chr17 47763659 47764050 + 14.5907125388533 NA intron (NM_001161723, intron 1 of 8) intron (NM_001161723, intron 1 of 8) -21890 NM_011549 21425 Mm.2305 NM_011549 ENSMUSG00000023990 Tfeb Tcfeb|bHLHe35 transcription factor EB protein-coding unique_peak2_24_304_-1.16665024031386_7.66934031229332_14.589911389304 chr5 120102370 120103847 + 14.589911389304 NA Intergenic MLT1B|LTR|ERVL-MaLR -13405 NM_028762 74111 Mm.41022 NM_028762 ENSMUSG00000029594 Rbm19 1200009A02Rik|AV302714|NPO RNA binding motif protein 19 protein-coding common_peak1_24_304_-1.16665024031386_7.66934031229332_14.589911389304 chr6 34910382 34910902 + 14.589911389304 NA intron (NM_001013366, intron 1 of 14) CpG 189 NM_001013366 101240 Mm.152120 NM_001013366 ENSMUSG00000058486 Wdr91 9530020G05Rik|AI987683|AU018665 WD repeat domain 91 protein-coding common_peak2_43_495_-0.867786256506568_8.52030318213359_14.5853078904877 chr7 114562020 114563410 + 14.5853078904877 NA intron (NM_177382, intron 1 of 4) CpG 257 NR_110407 244209 Mm.108037 NM_177382 ENSMUSG00000030670 Cyp2r1 - cytochrome P450, family 2, subfamily r, polypeptide 1 protein-coding common_peak1_46_130_1.16970808588857_7.61827704448173_14.5836133949205 chr12 32206298 32207262 + 14.5836133949205 NA intron (NM_001146200, intron 1 of 10) intron (NM_001146200, intron 1 of 10) 1558 NM_001146201 30955 Mm.101369 NM_020272 ENSMUSG00000020573 Pik3cg 5830428L06Rik|PI3Kgamma|p110gamma phosphoinositide-3-kinase, catalytic, gamma polypeptide protein-coding common_peak2_329_2600_0.307187161782567_11.4984442648343_14.5826404617687 chr11 69058381 69061299 + 14.5826404617687 NA promoter-TSS (NM_028005) promoter-TSS (NM_028005) 65 NM_028005 71923 Mm.340257 NM_028005 ENSMUSG00000045176 Borcs6 2310047M10Rik BLOC-1 related complex subunit 6 protein-coding common_peak2_88_386_0.736828612619778_8.9646040624543_14.5819871609683 chr11 58210040 58211882 + 14.5819871609683 NA Intergenic Intergenic -4016 NM_019440 54396 Mm.458517 NM_019440 ENSMUSG00000069874 Irgm2 AI481100|GTPI|Ifggd2|Iigp2 immunity-related GTPase family M member 2 protein-coding common_peak1_92_414_0.713849194653303_9.05389212356094_14.5817391865119 chr4 119889587 119890948 + 14.5817391865119 NA intron (NM_010657, intron 1 of 8) intron (NM_010657, intron 1 of 8) 75589 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak1_124_1370_-0.486892076764523_10.177566817397_14.5789154337903 chr7 27486958 27488151 + 14.5789154337903 NA intron (NM_018820, intron 1 of 1) CpG 601 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding common_peak1_36_424_-0.951535379813654_8.25555134111824_14.5779615997529 chr2 172437100 172437758 + 14.5779615997529 NA Intergenic tRNA-Ala-GCY_|tRNA|tRNA -3149 NM_025542 66404 Mm.25157 NM_025542 ENSMUSG00000027502 Rtfdc1 1700067C04Rik|2410001C21Rik|5730427M17Rik|AA589417 replication termination factor 2 domain containing 1 protein-coding common_peak1_50_151_1.09974326368387_7.79779914528552_14.5735277886653 chr2 68782355 68783074 + 14.5735277886653 NA Intergenic Intergenic -78843 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_292_2209_0.331763008914056_11.2757121587358_14.5702720894415 chr3 89390026 89395230 + 14.5702720894415 NA intron (NR_040403, intron 1 of 1) CpG 575 NM_009565 22724 Mm.262184 NM_009565 ENSMUSG00000028042 Zbtb7b Thpok|Zfp67|c-Krox zinc finger and BTB domain containing 7B protein-coding common_peak2_69_261_0.87463502417244_8.47074051362367_14.5679310255654 chr11 4637120 4638340 + 14.5679310255654 NA promoter-TSS (NM_029291) promoter-TSS (NM_029291) -63 NM_029291 75452 Mm.439906 NM_029291 ENSMUSG00000020412 Ascc2 1700011I11Rik|2610034L15Rik|AI482016|ASC1p100|AW046480 activating signal cointegrator 1 complex subunit 2 protein-coding common_peak2_215_1445_0.404192663447546_10.6999481686749_14.5672821813242 chr4 32362557 32366223 + 14.5672821813242 NA Intergenic Intergenic -53045 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_206_1360_0.416278484896084_10.618590593952_14.5671364819779 chr11 100849869 100851396 + 14.5671364819779 NA promoter-TSS (NM_001113563) promoter-TSS (NM_001113563) -47 NM_001113563 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding common_peak2_629_6179_0.202935935224721_12.6948590904041_14.5641878520941 chr2 3712690 3721922 + 14.5641878520941 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 3848 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_341_2730_0.300031948124527_11.5652295728275_14.5640097145915 chr9 107632662 107635490 + 14.5640097145915 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 1266 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak1_56_628_-0.752417487329115_8.92070746321473_14.563594630111 chr6 113604411 113605409 + 14.563594630111 NA intron (NM_133937, intron 1 of 2) CpG 138 NM_133937 101314 Mm.485793 NM_133937 ENSMUSG00000033940 Brk1 6720456B07Rik|AW011779 BRICK1, SCAR/WAVE actin-nucleating complex subunit protein-coding common_peak2_478_5933_-0.223374103771828_12.4231021595944_14.5571059615177 chr14 79528737 79539335 + 14.5571059615177 NA intron (NM_001286411, intron 1 of 8) intron (NM_001286411, intron 1 of 8) 18362 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak1_134_1484_-0.465934061970213_10.303280184703_14.5569353844047 chr1 173878904 173880893 + 14.5569353844047 NA intron (NM_001170853, intron 2 of 9) intron (NM_001170853, intron 2 of 9) 289 NM_001170853 100040462 Mm.463437 NM_001170853 ENSMUSG00000090272 Mndal Gm2785|Ifi212 myeloid nuclear differentiation antigen like protein-coding common_peak2_123_1359_-0.489484109030684_10.1646488816224_14.5554734866269 chr19 6117291 6119499 + 14.5554734866269 NA exon (NM_133678, exon 1 of 2) exon (NM_133678, exon 1 of 2) 191 NM_133678 66406 Mm.303924 NM_133678 ENSMUSG00000024790 Sac3d1 2410004C24Rik|AU015683|shd1 SAC3 domain containing 1 protein-coding common_peak1_113_1246_-0.51313471909314_10.0276783902831_14.5490684914658 chr13 112926795 112928352 + 14.5490684914658 NA promoter-TSS (NM_028151) promoter-TSS (NM_028151) -193 NM_028151 72198 Mm.291029 NM_028151 ENSMUSG00000016018 Skiv2l2 2610528A15Rik|mKIAA0052 superkiller viralicidic activity 2-like 2 (S. cerevisiae) protein-coding common_peak2_140_1553_-0.454505184828408_10.3745181959935_14.5468832528194 chr5 122371270 122373602 + 14.5468832528194 NA promoter-TSS (NM_026883) promoter-TSS (NM_026883) -72 NM_024216 68080 Mm.266328 NM_024216 ENSMUSG00000029464 Gpn3 A930018B01Rik|Atpbd1c|D5Ertd708e GPN-loop GTPase 3 protein-coding common_peak1_35_77_1.44589545419677_7.00834994596064_14.5422105410886 chr19 6298515 6299244 + 14.5422105410886 NA 3' UTR (NM_010119, exon 5 of 5) 3' UTR (NM_010119, exon 5 of 5) -7578 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak2_395_3331_0.272506400821328_11.8384258857762_14.5399690435754 chr13 30971078 30974811 + 14.5399690435754 NA intron (NM_025588, intron 1 of 27) RCHARR1|DNA|hAT-Charlie 1103 NM_025588 66482 Mm.293510 NM_025588 ENSMUSG00000021357 Exoc2 2410030I24Rik|AI648199|Sec5|Sec5l1 exocyst complex component 2 protein-coding common_peak1_447_3931_0.251966388422769_12.067030800552_14.5384526597947 chr9 57763875 57766479 + 14.5384526597947 NA exon (NM_007713, exon 1 of 13) exon (NM_007713, exon 1 of 13) 683 NM_007713 102414 Mm.25720 NM_007713 ENSMUSG00000032316 Clk3 AI256811 CDC-like kinase 3 protein-coding common_peak2_188_1195_0.441742001906961_10.4448726751516_14.5329201509205 chr11 74546116 74551801 + 14.5329201509205 NA intron (NM_001015046, intron 2 of 24) MIR|SINE|MIR 41200 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_280_2086_0.340376602041227_11.1974031861804_14.5319124051091 chr19 5609035 5610940 + 14.5319124051091 NA promoter-TSS (NR_037603) promoter-TSS (NR_037603) 107 NM_001199249 81601 Mm.228930 NM_178637 ENSMUSG00000024926 Kat5 AI839539|CPLA2|Htatip|Htatip1|PLIP|Tip55|Tip60 K(lysine) acetyltransferase 5 protein-coding unique_peak1_24_34_1.95673217519142_6.10764910454068_14.5313873420204-2 chr6 91712592 91713152 + 14.5313873420204 NA intron (NM_009320, intron 2 of 14) intron (NM_009320, intron 2 of 14) 28805 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding unique_peak1_24_34_1.95673217519142_6.10764910454068_14.5313873420204 chr12 82223298 82223929 + 14.5313873420204 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 53597 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak2_275_3200_-0.308487018926076_11.4900634520825_14.5250440222034 chr7 5060089 5063590 + 14.5250440222034 NA promoter-TSS (NM_133671) promoter-TSS (NM_133671) -304 NM_133671 22185 Mm.360389 NM_133671 ENSMUSG00000030435 U2af2 65kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein-coding common_peak1_354_4232_-0.266199640593083_11.9143649530219_14.5214619696 chr5 125390968 125394424 + 14.5214619696 NA Intergenic Intergenic -2679 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak1_68_754_-0.677737513965647_9.22146407722962_14.5131063771857 chr5 135778607 135779239 + 14.5131063771857 NA promoter-TSS (NM_029659) promoter-TSS (NM_029659) 274 NM_008617 17448 Mm.297096 NM_008617 ENSMUSG00000019179 Mdh2 MDH|Mdh-2|Mor-1|Mor1 malate dehydrogenase 2, NAD (mitochondrial) protein-coding unique_peak2_2_83_-3.05837888824573_4.86312797865589_14.5113870441124 chr6 125067074 125067695 + 14.5113870441124 NA promoter-TSS (NM_001163269) promoter-TSS (NM_001163269) -536 NM_001163269 381810 Mm.333386 NM_001163268 ENSMUSG00000067714 Lpar5 GPR93|Gm1072|Gpr92|LPA5 lysophosphatidic acid receptor 5 protein-coding unique_peak2_2_83_-3.05837888824573_4.86312797865589_14.5113870441124-2 chr7 83927670 83928268 + 14.5113870441124 NA Intergenic IAPEz-int|LTR|ERVK 35969 NM_023403 67943 Mm.117365 NM_023403 ENSMUSG00000038503 Mesdc2 2210015O11Rik|AW537813|mKIAA0081|mesd|msd mesoderm development candidate 2 protein-coding common_peak2_75_828_-0.641639465726147_9.37440855863268_14.5098619556955 chr5 138186623 138188127 + 14.5098619556955 NA promoter-TSS (NM_009315) promoter-TSS (NM_009315) -160 NM_178612 66455 Mm.24592 NM_178612 ENSMUSG00000036968 Cnpy4 2610019P18Rik canopy FGF signaling regulator 4 protein-coding common_peak1_285_2138_0.336081890603738_11.2307617124669_14.5093265561153 chr12 101974969 101976842 + 14.5093265561153 NA promoter-TSS (NM_016856) promoter-TSS (NM_016856) -69 NM_016856 51786 Mm.716 NM_016856 ENSMUSG00000041781 Cpsf2 100kDa|2610024B04Rik|AI662483|Cpsf|MCPSF|mKIAA1367 cleavage and polyadenylation specific factor 2 protein-coding common_peak2_107_523_0.642009187674857_9.35442759537488_14.5088487627951 chr14 14702995 14704042 + 14.5088487627951 NA intron (NM_001033270, intron 1 of 24) CpG 493 NM_001033270 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding common_peak1_31_373_-1.02402888557611_8.03488001709958_14.5072675671298 chr17 6779485 6780143 + 14.5072675671298 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 2966 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_402_3411_0.26928518849085_11.8710445255637_14.5056460281253 chr8 25596154 25599441 + 14.5056460281253 NA promoter-TSS (NM_173012) promoter-TSS (NM_173012) -310 NM_173012 270035 Mm.268349 NM_173012 ENSMUSG00000037363 Letm2 6030453H13|D030041N04Rik leucine zipper-EF-hand containing transmembrane protein 2 protein-coding common_peak1_141_1564_-0.452175084786607_10.3858593994267_14.503333921115 chr12 102353395 102355095 + 14.503333921115 NA intron (NM_001161365, intron 4 of 9) intron (NM_001161365, intron 4 of 9) 70604 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_186_2094_-0.385816854484689_10.8398261013444_14.5031038861939 chr10 3972519 3974091 + 14.5031038861939 NA exon (NM_001170786, exon 1 of 28) exon (NM_001170786, exon 1 of 28) 230 NM_172308 270685 Mm.184752 NM_172308 ENSMUSG00000040675 Mthfd1l 2410004L15Rik|AI647056|Fthfsdc1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein-coding common_peak2_46_525_-0.835787901866285_8.62102503835916_14.4993964871667 chrX 8073696 8075434 + 14.4993964871667 NA promoter-TSS (NM_001290716) promoter-TSS (NM_001290716) 195 NM_011514 20937 Mm.9244 NM_011514 ENSMUSG00000039231 Suv39h1 AI852103|AL022883|DXHXS7466e|H3-K9-HMTase 1|KMT1A|mIS6 suppressor of variegation 3-9 homolog 1 (Drosophila) protein-coding common_peak1_76_839_-0.637523976893057_9.39548352921959_14.4911863994799 chr10 41449506 41450352 + 14.4911863994799 NA promoter-TSS (NM_001277229) promoter-TSS (NM_001277229) -429 NM_001277229 268294 Mm.258475 NM_153398 ENSMUSG00000019826 Zbtb24 BC055367|Bif1|Bsg1|ZNF450 zinc finger and BTB domain containing 24 protein-coding common_peak1_20_264_-1.27237390565206_7.41366159662453_14.4889012120534 chr7 27490309 27490767 + 14.4889012120534 NA TTS (NM_018820) TTS (NM_018820) 3585 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding common_peak2_202_1324_0.420422779440115_10.581988034058_14.486294074745 chr17 57246926 57250060 + 14.486294074745 NA promoter-TSS (NM_001308072) promoter-TSS (NM_001308072) -804 NM_030084 78308 Mm.28468 NM_030084 ENSMUSG00000005823 Gpr108 1810015L19Rik|AA589464|C79132|Lustr2 G protein-coupled receptor 108 protein-coding common_peak1_13_195_-1.55475740528364_6.83733114147339_14.4797115305002 chr11 51916407 51916736 + 14.4797115305002 NA Intergenic Intergenic -51060 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_98_1078_-0.554024685673852_9.79846680665109_14.4774117332643 chr17 6600933 6602327 + 14.4774117332643 NA promoter-TSS (NM_001166627) promoter-TSS (NM_001166627) -41 NM_001166627 100040531 Mm.457987 NM_001166627 ENSMUSG00000095677 Dynlt1f 100040631|Dynlt1e dynein light chain Tctex-type 1F protein-coding common_peak1_82_346_0.770714016590087_8.8241488608733_14.4756840911852 chr11 118211054 118212548 + 14.4756840911852 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 941 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak2_121_630_0.589635567250779_9.59631397860794_14.4721969369282 chr17 6105962 6107589 + 14.4721969369282 NA promoter-TSS (NM_001103181) promoter-TSS (NM_001103181) -55 NM_001103181 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding common_peak2_185_2082_-0.3870180919667_10.8309380780573_14.4721276560564 chr2 53190416 53193103 + 14.4721276560564 NA promoter-TSS (NM_018785) promoter-TSS (NM_018785) -325 NM_022989 65103 Mm.37623 NM_022989 ENSMUSG00000026960 Arl6ip6 2310057C01Rik|2610529A11Rik|Aip-6 ADP-ribosylation factor-like 6 interacting protein 6 protein-coding common_peak1_63_225_0.929298923082692_8.28482842395653_14.4701281352325 chr13 47043579 47044496 + 14.4701281352325 NA promoter-TSS (NM_016785) promoter-TSS (NM_016785) 538 NM_172262 218214 Mm.31259 NM_172262 ENSMUSG00000038080 Kdm1b 4632428N09Rik|AI482520|Aof1 lysine (K)-specific demethylase 1B protein-coding common_peak1_58_649_-0.738769502873991_8.97491115647882_14.4696465424077 chr6 129036574 129037718 + 14.4696465424077 NA Intergenic Intergenic -8755 NR_024262 232408 Mm.259262 NM_153094 ENSMUSG00000030154 Klrb1f A630024B12Rik|Nkr-p1f|Nkrp1-f|Nkrp1f killer cell lectin-like receptor subfamily B member 1F protein-coding common_peak1_321_2517_0.310546656826322_11.4533358961322_14.4674193606072 chr19 53441600 53444585 + 14.4674193606072 NA non-coding (NR_028427, exon 10 of 10) non-coding (NR_028427, exon 10 of 10) 21704 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_56_627_-0.750122029341455_8.9195597342209_14.4651680251454 chr15 89195922 89196690 + 14.4651680251454 NA exon (NM_027081, exon 1 of 20) exon (NM_027081, exon 1 of 20) 168 NM_027081 69440 Mm.482128 NM_027081 ENSMUSG00000015377 Dennd6b 1700027J05Rik|AI414881|Fam116b DENN/MADD domain containing 6B protein-coding common_peak1_105_1155_-0.53257160587121_9.90863987956507_14.4641209445886 chr2 79258522 79260311 + 14.4641209445886 NA intron (NM_010576, intron 2 of 27) intron (NM_010576, intron 2 of 27) 3990 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak2_73_287_0.836470960955454_8.58816048192004_14.463558665266-2 chr5 69591556 69592599 + 14.463558665266 NA intron (NM_001038015, intron 1 of 6) CpG 208 NM_001038015 67980 Mm.33830 NM_027681 ENSMUSG00000029209 Gnpda2 4921523I18Rik|4933412A11Rik|BB189630|GNPDA|Gnp2|Sb52|mKIAA4008 glucosamine-6-phosphate deaminase 2 protein-coding common_peak2_73_287_0.836470960955454_8.58816048192004_14.463558665266 chr15 5143247 5144647 + 14.463558665266 NA promoter-TSS (NM_001013367) promoter-TSS (NM_001013367) 86 NM_001013367 105787 Mm.207004 NM_001013367 ENSMUSG00000050697 Prkaa1 AI194361|AI450832|AL024255|AMPKalpha1|C130083N04Rik protein kinase, AMP-activated, alpha 1 catalytic subunit protein-coding unique_peak1_26_41_1.82989014406083_6.30726249480918_14.4624371097209 chr11 117949467 117950153 + 14.4624371097209 NA Intergenic CpG 19556 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_36_423_-0.948136803351789_8.2538520528873_14.4586267978574 chr9 32703215 32703905 + 14.4586267978574 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 7518 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_39_96_1.31783369663_7.25882969050213_14.4566807753052 chr7 38186568 38187419 + 14.4566807753052 NA intron (NM_028166, intron 1 of 3) intron (NM_028166, intron 1 of 3) 3206 NM_028166 72244 Mm.187554 NM_028166 1600014C10Rik AI428873 RIKEN cDNA 1600014C10 gene protein-coding common_peak1_89_394_0.727082105686522_8.98924989590773_14.4552000400654 chr13 73763501 73764658 + 14.4552000400654 NA intron (NM_011390, intron 1 of 23) intron (NM_011390, intron 1 of 23) 382 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak1_235_1638_0.380150888315081_10.868675583257_14.451218597743 chr11 113682996 113685041 + 14.451218597743 NA promoter-TSS (NM_177777) promoter-TSS (NM_177777) 133 NM_138598 28081 Mm.351688 NM_138598 ENSMUSG00000041629 Fam104a D11Wsu99e family with sequence similarity 104, member A protein-coding common_peak1_24_303_-1.1619123213072_7.66697135278998_14.4496816804084 chrX 57338746 57339345 + 14.4496816804084 NA promoter-TSS (NM_152801) promoter-TSS (NM_152801) -316 NM_152801 73341 Mm.261443 NM_152801 ENSMUSG00000031133 Arhgef6 1600028C08Rik|1700038J06Rik|4930592P22Rik|alpha-PIX Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 protein-coding unique_peak2_49_555_-0.806313569400766_8.71578428802312_14.4492112434921 chr6 130101842 130104213 + 14.4492112434921 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) 26808 NM_010650 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding common_peak2_138_1528_-0.456387910568203_10.3501787360767_14.4463737295114 chr13 111867175 111869345 + 14.4463737295114 NA intron (NR_130345, intron 1 of 2) intron (NR_130345, intron 1 of 2) 324 NR_130345 102636620 Mm.402328 NR_130345 ENSMUSG00000086111 Gm15326 OTTMUSG00000020187 predicted gene 15326 ncRNA common_peak2_57_190_0.997846797663176_8.07635222686734_14.4455396248665 chr3 65658561 65659925 + 14.4455396248665 NA promoter-TSS (NR_106200) promoter-TSS (NR_106200) -45 NR_106200 102465905 NR_106200 ENSMUSG00000098944 Mir8120 Gm27637|mmu-mir-8120 microRNA 8120 ncRNA common_peak2_87_957_-0.590859480669517_9.60845210540142_14.4435322420144 chr11 32579359 32583022 + 14.4435322420144 NA intron (NM_009288, intron 4 of 18) intron (NM_009288, intron 4 of 18) 47924 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_38_91_1.34938149355085_7.19825270283244_14.4429636035167 chr10 67126791 67127658 + 14.4429636035167 NA promoter-TSS (NM_207221) promoter-TSS (NM_207221) -34 NM_207221 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding common_peak1_54_606_-0.764261687869766_8.8634218623208_14.4417647159731 chrX 57392173 57393141 + 14.4417647159731 NA intron (NM_001166623, intron 1 of 8) CpG 379 NM_011252 19655 Mm.28275 NM_011252 ENSMUSG00000031134 Rbmx hnRNP G RNA binding motif protein, X chromosome protein-coding common_peak1_59_659_-0.731053470461756_9.00079547901494_14.4414247313226 chr14 27340852 27341579 + 14.4414247313226 NA intron (NM_001289687, intron 1 of 9) MTC|LTR|ERVL-MaLR 5178 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_39_453_-0.908801948473782_8.37214751305402_14.433241871079 chr2 157135278 157135956 + 14.433241871079 NA promoter-TSS (NM_018851) promoter-TSS (NM_018851) -395 NM_018851 56045 Mm.248478 NM_018851 ENSMUSG00000027639 Samhd1 E330031J07Rik|Mg11 SAM domain and HD domain, 1 protein-coding common_peak1_57_637_-0.742136988065944_8.9463441197319_14.4315617068728 chr11 69324010 69324767 + 14.4315617068728 NA promoter-TSS (NM_172560) promoter-TSS (NM_172560) 402 NM_001024206 245828 Mm.28073 NM_001024206 ENSMUSG00000049299 Trappc1 BET5|D11Ertd172e|MUM2 trafficking protein particle complex 1 protein-coding common_peak1_44_503_-0.851101285935284_8.55172928053227_14.4310749085613 chr6 129735768 129736770 + 14.4310749085613 NA intron (NM_177155, intron 3 of 5) intron (NM_177155, intron 3 of 5) 4215 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak1_75_300_0.819969149009902_8.64360425126465_14.4300727379948 chr7 43671471 43672731 + 14.4300727379948 NA promoter-TSS (NM_145582) promoter-TSS (NM_145582) 70 NM_145582 233189 Mm.26514 NM_145582 ENSMUSG00000038888 Ctu1 Atpbd3|BC005752 cytosolic thiouridylase subunit 1 protein-coding common_peak2_68_256_0.876970771052916_8.44410993472034_14.4292771742742 chr5 32610091 32611795 + 14.4292771742742 NA promoter-TSS (NM_001205133) promoter-TSS (NM_001205133) -228 NM_001205133 22612 Mm.4558 NM_009535 ENSMUSG00000014932 Yes1 Yes|p61-Yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding common_peak2_52_585_-0.779015088979136_8.80524930993268_14.4284572075568 chr11 90248181 90249290 + 14.4284572075568 NA promoter-TSS (NM_026178) promoter-TSS (NM_026178) -741 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak1_154_899_0.50100660039559_10.0642844914148_14.4242394183162 chr2 4559006 4560439 + 14.4242394183162 NA promoter-TSS (NM_001177844) promoter-TSS (NM_001177844) -32 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_273_2017_0.344239408614859_11.1508301634138_14.4201194198608 chr1 106611074 106617206 + 14.4201194198608 NA intron (NM_009741, intron 1 of 1) L1ME3Cz|LINE|L1 -67509 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_69_262_0.869139036417588_8.4734885075011_14.4163213273551 chr7 64057899 64059830 + 14.4163213273551 NA Intergenic C-rich|Low_complexity|Low_complexity -94971 NM_001039104 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak1_60_669_-0.723497834298163_9.02626836819605_14.4158186829624 chr11 6627356 6628590 + 14.4158186829624 NA Intergenic RMER6A|LTR|ERVK -1906 NM_134011 21379 Mm.247761 NM_134011 ENSMUSG00000000384 Tbrg4 2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12|mKIAA0948 transforming growth factor beta regulated gene 4 protein-coding common_peak2_60_669_-0.723497834298163_9.02626836819605_14.4158186829624 chr19 45748149 45750450 + 14.4158186829624 NA TTS (NM_023799) TTS (NM_023799) 264 NM_008723 18150 Mm.1406 NM_008723 ENSMUSG00000056209 Npm3 Nub1 nucleoplasmin 3 protein-coding unique_peak2_8_145_-1.91175150819371_6.23394880478316_14.4139497621866 chr1 138127584 138128845 + 14.4139497621866 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 46912 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding unique_peak2_8_145_-1.91175150819371_6.23394880478316_14.4139497621866-2 chr10 99608263 99609209 + 14.4139497621866 NA promoter-TSS (NR_038019) promoter-TSS (NR_038019) -435 NR_038019 100504202 Mm.403801 NR_038019 Gm20110 - predicted gene, 20110 ncRNA common_peak2_148_848_0.515304258554583_9.98727287283033_14.4119441670178 chr11 102184064 102186161 + 14.4119441670178 NA exon (NM_172947, exon 1 of 5) exon (NM_172947, exon 1 of 5) 144 NM_172947 268490 Mm.259079 NM_172947 ENSMUSG00000020922 Lsm12 1110032E16Rik|1110059P07|2600001B17Rik LSM12 homolog protein-coding common_peak1_151_1679_-0.434044380710166_10.497223327311_14.4107520088488 chr8 31149327 31150281 + 14.4107520088488 NA promoter-TSS (NM_144927) promoter-TSS (NM_144927) -512 NM_144927 234138 Mm.349800 NM_144927 ENSMUSG00000031577 Tti2 - TELO2 interacting protein 2 protein-coding common_peak1_209_2372_-0.360303843330772_11.0323444635286_14.4088210728411 chr5 135955769 135958378 + 14.4088210728411 NA Intergenic B1_Mus2|SINE|Alu 17403 NM_001160366 109267 Mm.332750 NM_001160366 ENSMUSG00000029699 Ssc4d C330016E03Rik|S4D-SRCRB|SRCRB-S4D|Srcrb4d scavenger receptor cysteine rich family, 4 domains protein-coding common_peak1_198_2238_-0.37165701900518_10.94281030335_14.4028896622163 chr9 108516295 108518214 + 14.4028896622163 NA intron (NM_175143, intron 1 of 9) CpG 167 NM_175143 69232 Mm.335449 NM_175143 ENSMUSG00000006673 Qrich1 2610028H07Rik glutamine-rich 1 protein-coding common_peak2_174_1949_-0.399707107235118_10.7294048550194_14.4022772341355 chr8 70536542 70540553 + 14.4022772341355 NA Intergenic Intergenic -1128 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding common_peak1_25_313_-1.1391995042507_7.72502099676628_14.4011707729991 chr5 134607250 134607943 + 14.4011707729991 NA intron (NM_022964, intron 3 of 11) B3|SINE|B2 7429 NM_022964 56743 Mm.391375 NM_020044 ENSMUSG00000040751 Lat2 AW125574|LAB|NTAL|WSCR5|Wbscr15|Wbscr5 linker for activation of T cells family, member 2 protein-coding common_peak2_25_313_-1.1391995042507_7.72502099676628_14.4011707729991 chr17 34329415 34330616 + 14.4011707729991 NA intron (NM_001033978, intron 1 of 4) intron (NM_001033978, intron 1 of 4) 4340 NM_001033978 381091 Mm.139204 NM_001033978 ENSMUSG00000067341 H2-Eb2 A130038H09Rik|H-2Eb2|Ia-5|Ia5|Iebeta2 histocompatibility 2, class II antigen E beta2 protein-coding common_peak1_27_332_-1.09281361705334_7.83297155854459_14.4000758754 chr8 27023213 27023744 + 14.4000758754 NA promoter-TSS (NM_153592) promoter-TSS (NM_153592) -321 NM_153592 244373 Mm.277699 NM_153592 ENSMUSG00000031483 Erlin2 BC036333|C87251|Spfh2 ER lipid raft associated 2 protein-coding common_peak1_61_679_-0.71609642021704_9.05134272602918_14.3926962058833 chrX 151343872 151345036 + 14.3926962058833 NA exon (NM_198105, exon 1 of 16) exon (NM_198105, exon 1 of 16) 231 NM_198105 207375 Mm.391339 NM_198105 ENSMUSG00000025262 Fam120c D930001I21Rik|ORF34 family with sequence similarity 120, member C protein-coding unique_peak1_25_38_1.87001902577868_6.22041173175159_14.3924671884647 chr6 65578214 65578709 + 14.3924671884647 NA Intergenic Intergenic -11937 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak2_212_1419_0.405618847608256_10.6744846381962_14.3923576741907 chr17 28951671 28953703 + 14.3923576741907 NA promoter-TSS (NM_025888) promoter-TSS (NM_025888) -529 NM_025888 66989 Mm.435 NM_025888 ENSMUSG00000005936 Kctd20 2410004N11Rik|AI451943|AW541186|D17Ertd562e potassium channel tetramerisation domain containing 20 protein-coding common_peak1_238_1668_0.376336274729979_10.8929363767276_14.3870621110694 chr3 132683132 132684909 + 14.3870621110694 NA promoter-TSS (NM_001163455) promoter-TSS (NM_001163455) -124 NM_001163455 271981 Mm.257864 NM_173032 ENSMUSG00000028030 Tbck 1700120J03Rik|9430001M19|A630047E20Rik|C030007I09Rik|Tbckl TBC1 domain containing kinase protein-coding common_peak2_124_1367_-0.483731735871194_10.1759866469503_14.3783528893529 chr9 108119229 108123057 + 14.3783528893529 NA intron (NM_007567, intron 3 of 11) PB1D7|SINE|Alu -12575 NR_126078 76873 Mm.436935 NR_126077 ENSMUSG00000102224 4930447F24Rik - RIKEN cDNA 4930447F24 gene ncRNA unique_peak2_16_224_-1.41024493024287_7.10865872609561_14.3782933061276 chr18 36679564 36680258 + 14.3782933061276 NA promoter-TSS (NM_146085) promoter-TSS (NM_146085) -545 NM_146085 225372 Mm.89673 NM_146085 ENSMUSG00000006050 Apbb3 Fe65l2|Rirl2|TR2S amyloid beta (A4) precursor protein-binding, family B, member 3 protein-coding common_peak1_29_352_-1.05486794067348_7.93609040293444_14.37401934369 chr3 95893813 95894485 + 14.37401934369 NA 5' UTR (NM_146104, exon 1 of 6) 5' UTR (NM_146104, exon 1 of 6) 228 NM_146134 226548 Mm.306954 NM_146104 ENSMUSG00000015750 Aph1a 6530402N02Rik|APH-1a aph1 homolog A, gamma secretase subunit protein-coding common_peak1_77_314_0.800347742406938_8.69938188959075_14.3737261495439 chr12 100882258 100883326 + 14.3737261495439 NA intron (NM_001177673, intron 2 of 2) RSINE1|SINE|B4 16732 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding common_peak1_77_314_0.800347742406938_8.69938188959075_14.3737261495439-2 chr7 100536519 100537499 + 14.3737261495439 NA promoter-TSS (NM_183270) promoter-TSS (NM_183270) -91 NM_183270 68185 Mm.228995 NM_183270 ENSMUSG00000044881 Coa4 5330414O08Rik|AI115477|AW047259|Chchd8|E2ig2 cytochrome c oxidase assembly factor 4 protein-coding common_peak2_30_362_-1.03714353326144_7.98525397136503_14.3736239019433 chr7 81420467 81421463 + 14.3736239019433 NA intron (NM_001252525, intron 2 of 11) intron (NM_001252525, intron 2 of 11) 33793 NM_001252525 12877 Mm.273122 NM_007755 ENSMUSG00000025586 Cpeb1 AU024112|Cpeb|mCPEB cytoplasmic polyadenylation element binding protein 1 protein-coding common_peak1_111_554_0.623445411153169_9.42806666681405_14.3721423472678 chr4 40843584 40845621 + 14.3721423472678 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) 5536 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA common_peak2_96_444_0.687676837509649_9.14149994460858_14.3719211897663 chr17 25941026 25942578 + 14.3719211897663 NA TTS (NM_001039038) TTS (NM_001039038) 187 NM_001291025 14755 Mm.362054 NM_011822 ENSMUSG00000025728 Pigq Gpi1|Gpi1h|Gpi1p|Gpih phosphatidylinositol glycan anchor biosynthesis, class Q protein-coding common_peak1_162_968_0.48349158850629_10.1620986496682_14.3664864417955 chr19 11447551 11449622 + 14.3664864417955 NA intron (NM_021718, intron 1 of 6) intron (NM_021718, intron 1 of 6) 5028 NM_021718 60361 Mm.33957 NM_021718 ENSMUSG00000056290 Ms4a4b AI463180|Chandra|Ly116 membrane-spanning 4-domains, subfamily A, member 4B protein-coding common_peak2_109_1198_-0.519712613841952_9.96775963649325_14.3659277176632 chr17 56584765 56586317 + 14.3659277176632 NA promoter-TSS (NM_001029979) promoter-TSS (NM_001029979) 559 NM_001163300 224903 Mm.255066 NM_001163300 ENSMUSG00000071054 Safb 3110021E02Rik|5330423C17Rik|AU018122|D18386|E130307D12|HAP|HET|SAF-B1|SAFB1 scaffold attachment factor B protein-coding common_peak2_43_493_-0.861957177704371_8.51738864273249_14.3642518870684 chr13 54191790 54193520 + 14.3642518870684 NA intron (NM_001010973, intron 1 of 2) intron (NM_001010973, intron 1 of 2) 526 NM_008286 15466 Mm.57243 NM_008286 ENSMUSG00000034987 Hrh2 - histamine receptor H2 protein-coding common_peak1_90_989_-0.578939672246925_9.66181487884351_14.3625935443681 chr7 4323739 4325686 + 14.3625935443681 NA Intergenic RLTR26|LTR|ERVK -13012 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak2_95_437_0.692213030863634_9.12089357503299_14.3620271874399 chr5 121204426 121205410 + 14.3620271874399 NA intron (NM_011290, intron 1 of 6) CpG 417 NM_011290 19988 Mm.262021 NM_011290 ENSMUSG00000029614 Rpl6 Taxreb107 ribosomal protein L6 protein-coding common_peak2_124_654_0.578769682589892_9.64473593771976_14.3619382957081 chr4 136051895 136053424 + 14.3619382957081 NA exon (NM_025919, exon 2 of 6) exon (NM_025919, exon 2 of 6) 712 NM_025919 67025 Mm.276856 NM_025919 ENSMUSG00000059291 Rpl11 2010203J19Rik ribosomal protein L11 protein-coding common_peak2_104_502_0.651165640871293_9.29999741024117_14.3592848722635 chr9 107312336 107314056 + 14.3592848722635 NA Intergenic Intergenic 16507 NM_009895 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak1_81_340_0.774427647227609_8.80084175263798_14.358145165474 chr17 6662767 6664004 + 14.358145165474 NA Intergenic B1_Mur1|SINE|Alu -7446 NM_001166627 100040531 Mm.457987 NM_001166627 ENSMUSG00000095677 Dynlt1f 100040631|Dynlt1e dynein light chain Tctex-type 1F protein-coding unique_peak1_16_11_2.81857376025302_4.99424938084766_14.357799430063 chr17 21708492 21708933 + 14.357799430063 NA 5' UTR (NM_001008501, exon 2 of 6) 5' UTR (NM_001008501, exon 2 of 6) 971 NM_001008501 240034 Mm.34723 NM_001008501 ENSMUSG00000067928 Zfp760 9430018I06|BC029103 zinc finger protein 760 protein-coding common_peak1_53_168_1.04794044174377_7.92484965715407_14.3569603130727 chr5 97111318 97111916 + 14.3569603130727 NA promoter-TSS (NM_198422) promoter-TSS (NM_198422) -21 NM_198422 231474 Mm.332505 NM_198422 ENSMUSG00000055725 Paqr3 6330415A20Rik|AY424292|RKTG progestin and adipoQ receptor family member III protein-coding unique_peak2_9_154_-1.81160248882982_6.37032316085933_14.3553702395567 chr9 37554375 37555331 + 14.3553702395567 NA Intergenic Intergenic -2108 NM_022029 64011 Mm.335065 NM_022029 ENSMUSG00000053310 Nrgn 0710001B06Rik|AI838505|NG|NG/RC3|Pss1|R75334|RC3 neurogranin protein-coding common_peak2_94_430_0.696925731186113_9.10000692468216_14.3534164124631 chr8 61927568 61928850 + 14.3534164124631 NA 5' UTR (NM_001293783, exon 1 of 38) 5' UTR (NM_001293783, exon 1 of 38) 122 NM_001293783 234311 Mm.275233 NM_144928 ENSMUSG00000037921 Ddx60 9830118M07 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 protein-coding common_peak1_94_430_0.696925731186113_9.10000692468216_14.3534164124631 chr3 90293264 90294199 + 14.3534164124631 NA Intergenic CpG 23582 NR_105979 102465612 NR_105979 ENSMUSG00000099199 Mir7012 Gm27370|mmu-mir-7012 microRNA 7012 ncRNA common_peak2_204_1345_0.41508615733343_10.602005773277_14.3532868470896 chr8 105564781 105567490 + 14.3532868470896 NA promoter-TSS (NM_013477) promoter-TSS (NM_013477) -95 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak2_318_2487_0.311273957509819_11.4364077488855_14.3528195652631 chr10 82984203 82987818 + 14.3528195652631 NA intron (NM_021439, intron 1 of 2) intron (NM_021439, intron 1 of 2) 513 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_481_4340_0.238652099188123_12.2031377568469_14.3511603506464 chr2 167941674 167945006 + 14.3511603506464 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 11013 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_189_1207_0.436677362136489_10.4567434203933_14.3508682222536 chr2 181598239 181599636 + 14.3508682222536 NA exon (NM_172676, exon 1 of 5) exon (NM_172676, exon 1 of 5) 210 NM_172676 229011 Mm.205422 NM_172676 ENSMUSG00000038605 Samd10 D930033N23Rik|E130318E08 sterile alpha motif domain containing 10 protein-coding common_peak1_189_1207_0.436677362136489_10.4567434203933_14.3508682222536-2 chr4 121214022 121215635 + 14.3508682222536 NA Intergenic CpG -26294 NM_001081013 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding common_peak2_58_197_0.976169784962216_8.11744151256072_14.3401153122397 chr18 68226392 68227686 + 14.3401153122397 NA intron (NM_172631, intron 3 of 5) intron (NM_172631, intron 3 of 5) 33934 NR_106078 102465702 NR_106078 ENSMUSG00000098253 Mir7219 Gm27613|mmu-mir-7219 microRNA 7219 ncRNA unique_peak2_12_184_-1.60257252706174_6.73009519698544_14.3392876334404 chr10 85127483 85128591 + 14.3392876334404 NA promoter-TSS (NM_028832) promoter-TSS (NM_028832) -10 NM_028832 74238 Mm.255401 NM_028832 ENSMUSG00000049038 Mterf2 1700007D05Rik|Mterfd3 mitochondrial transcription termination factor 2 protein-coding unique_peak1_31_61_1.56866926392465_6.7385309423492_14.3392876334404 chr17 21909341 21910024 + 14.3392876334404 NA 5' UTR (NM_001256493, exon 1 of 5) 5' UTR (NM_001256493, exon 1 of 5) 244 NM_001256493 70081 Mm.245648 NM_001256493 ENSMUSG00000078546 Zfp995 2210404O09Rik zinc finger protein 995 protein-coding common_peak1_113_1243_-0.509659739394072_10.0259409004336_14.3390794132492 chr2 120153478 120154697 + 14.3390794132492 NA intron (NM_133838, intron 1 of 5) intron (NM_133838, intron 1 of 5) 488 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding common_peak1_140_783_0.532555759464096_9.88098772384726_14.3356048551497 chr11 67454731 67456072 + 14.3356048551497 NA Intergenic CpG -77597 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_87_381_0.735593537030915_8.94522559655121_14.334267748304 chr5 122706898 122708388 + 14.334267748304 NA promoter-TSS (NM_011026) promoter-TSS (NM_011026) 99 NM_011026 18438 Mm.290884 NM_011026 ENSMUSG00000029470 P2rx4 AI504491|AW555605|D5Ertd444e|P2X4 purinergic receptor P2X, ligand-gated ion channel 4 protein-coding common_peak1_15_214_-1.45193958646429_7.02222305635731_14.331693670128 chr16 17921478 17921912 + 14.331693670128 NA Intergenic Intergenic 6524 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding unique_peak2_15_214_-1.45193958646429_7.02222305635731_14.331693670128 chrX 13230032 13230798 + 14.331693670128 NA Intergenic Intergenic 5868 NR_045430 72122 Mm.75434 NR_045429 ENSMUSG00000100714 2010308F09Rik - RIKEN cDNA 2010308F09 gene ncRNA common_peak1_147_1630_-0.438532793127759_10.452274670148_14.3298069636078 chr7 125490179 125492256 + 14.3298069636078 NA intron (NM_026330, intron 1 of 7) B1F|SINE|Alu 325 NM_026330 67711 Mm.4467 NM_026330 ENSMUSG00000030750 Nsmce1 2510027N19Rik NSE1 homolog, SMC5-SMC6 complex component protein-coding common_peak2_40_101_1.28901792309393_7.31693430351846_14.3278091343461 chr14 25614134 25614932 + 14.3278091343461 NA intron (NM_001310666, intron 6 of 23) MIRb|SINE|MIR 11020 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak1_40_101_1.28901792309393_7.31693430351846_14.3278091343461-2 chr15 102460873 102461503 + 14.3278091343461 NA intron (NM_001170911, intron 3 of 3) intron (NM_001170911, intron 3 of 3) 2018 NM_025385 66151 Mm.393955 NM_025385 ENSMUSG00000023048 Prr13 1110020C13Rik|2010324E22Rik proline rich 13 protein-coding common_peak1_40_101_1.28901792309393_7.31693430351846_14.3278091343461 chr12 8675440 8676377 + 14.3278091343461 NA intron (NM_030723, intron 1 of 20) intron (NM_030723, intron 1 of 20) 1227 NM_030723 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding unique_peak2_7_135_-2.01782188931153_6.07855189659458_14.3275881094285 chr14 71795976 71796737 + 14.3275881094285 NA Intergenic Intergenic -60353 NR_046274 74667 Mm.159286 NR_046274 4930434J06Rik - RIKEN cDNA 4930434J06 gene ncRNA common_peak1_101_480_0.664390004543771_9.24208808604193_14.3267446774091 chr4 59625563 59626818 + 14.3267446774091 NA promoter-TSS (NM_153158) promoter-TSS (NM_153158) -21 NM_001015681 230259 Mm.45688 NM_153158 ENSMUSG00000045071 E130308A19Rik - RIKEN cDNA E130308A19 gene protein-coding common_peak1_30_57_1.60870120960673_6.66233159993094_14.3216732664339 chr4 46304789 46305286 + 14.3216732664339 NA Intergenic CpG -39157 NM_183298 110805 Mm.354634 NM_183298 ENSMUSG00000070990 Foxe1 Titf2 forkhead box E1 protein-coding unique_peak1_30_57_1.60870120960673_6.66233159993094_14.3216732664339 chr4 130909068 130909612 + 14.3216732664339 NA Intergenic Intergenic -3994 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding common_peak1_29_53_1.65376893043423_6.58177196738059_14.3216722921404 chr4 133049465 133049978 + 14.3216722921404 NA intron (NM_146155, intron 2 of 6) intron (NM_146155, intron 2 of 6) 38215 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding unique_peak2_34_401_-0.969605976655394_8.16624870285123_14.3172320603901 chr2 164505838 164507718 + 14.3172320603901 NA intron (NM_133779, intron 11 of 11) intron (NM_133779, intron 11 of 11) 9253 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak2_226_2579_-0.343210603322884_11.1615500486492_14.3155646848164 chr17 79353384 79356819 + 14.3155646848164 NA promoter-TSS (NM_026514) promoter-TSS (NM_026514) -10 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak1_21_272_-1.2329593982259_7.4762774418069_14.3138274303608 chr5 145203548 145204021 + 14.3138274303608 NA promoter-TSS (NM_001167944) promoter-TSS (NM_001167944) -775 NM_016683 22757 Mm.332842 NM_016683 ENSMUSG00000055991 Zkscan5 AI132486|AI326970|Zfp95|hKraba1 zinc finger with KRAB and SCAN domains 5 protein-coding common_peak1_19_252_-1.29185934706353_7.33706390116254_14.3107835434008 chr17 56989719 56990228 + 14.3107835434008 NA promoter-TSS (NM_017393) promoter-TSS (NM_017393) -291 NM_017393 53895 Mm.287892 NM_017393 ENSMUSG00000002660 Clpp AU019820|D17Wsu160e caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding common_peak2_181_2031_-0.389727332865762_10.7938210203393_14.3103943284966 chr5 33272581 33275650 + 14.3103943284966 NA intron (NM_001198861, intron 1 of 9) CpG 889 NM_001198861 13016 Mm.7286 NM_013502 ENSMUSG00000037373 Ctbp1 BARS|CtBP3/BARS|D4S115h|D5H4S115|D5H4S115E C-terminal binding protein 1 protein-coding common_peak2_47_136_1.14235569631793_7.66920993111949_14.3098960071011 chr17 65772087 65773256 + 14.3098960071011 NA promoter-TSS (NM_133685) promoter-TSS (NM_133685) 81 NM_133685 106572 Mm.29274 NM_133685 ENSMUSG00000056515 Rab31 1700093E07Rik|AI415285|Rab22B RAB31, member RAS oncogene family protein-coding common_peak2_24_302_-1.15715879133657_7.66459458780467_14.3098960071011 chr7 141436889 141438058 + 14.3098960071011 NA intron (NM_026646, intron 1 of 9) CpG 401 NM_026646 68267 Mm.33729 NM_026646 ENSMUSG00000019082 Slc25a22 1300006L01Rik|AI060884|Gc1 solute carrier family 25 (mitochondrial carrier, glutamate), member 22 protein-coding unique_peak1_22_28_2.08047980896594_5.89822089961054_14.3097938842846 chr17 44710174 44710651 + 14.3097938842846 NA intron (NR_073392, intron 4 of 7) intron (NR_073392, intron 4 of 7) 25764 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak2_153_892_0.5008174868382_10.0529251085403_14.3087331732207 chr4 40843578 40847752 + 14.3087331732207 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) 4473 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA unique_peak1_12_3_3.92880893345458_3.96440446672729_14.3079150830058 chr1 21390986 21391362 + 14.3079150830058 NA Intergenic Intergenic 7618 NM_001113187 98582 Mm.326336 NM_001113187 ENSMUSG00000085079 Khdc1b AU014713|AU015226|AU024076|AY238603|C85331|C86372|C88118|Khdc1|Khdc1c KH domain containing 1B protein-coding unique_peak1_12_3_3.92880893345458_3.96440446672729_14.3079150830058-2 chr2 166566432 166566762 + 14.3079150830058 NA 3' UTR (NM_177782, exon 40 of 40) 3' UTR (NM_177782, exon 40 of 40) -106121 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak2_150_866_0.508632201763717_10.0142042841037_14.3068502394609 chr1 36796708 36799492 + 14.3068502394609 NA intron (NM_018872, intron 35 of 40) MTD|LTR|ERVL-MaLR 19116 NM_001289612 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak1_14_204_-1.4974359780941_6.9307621104584_14.3065657074111 chr4 150926038 150926500 + 14.3065657074111 NA intron (NM_011612, intron 1 of 7) intron (NM_011612, intron 1 of 7) -1730 NM_001077509 21942 Mm.244187 NM_011612 ENSMUSG00000028965 Tnfrsf9 4-1BB|A930040I11Rik|AA408498|AI325004|CDw137|Cd137|ILA|Ly63 tumor necrosis factor receptor superfamily, member 9 protein-coding common_peak1_14_204_-1.4974359780941_6.9307621104584_14.3065657074111-2 chr6 70792323 70792659 + 14.3065657074111 NA promoter-TSS (NM_009075) promoter-TSS (NM_009075) -316 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding common_peak1_284_2132_0.333936056087923_11.2256362783845_14.3065065464664 chr1 88585616 88589495 + 14.3065065464664 NA Intergenic Intergenic 36038 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA unique_peak1_23_31_2.01377546809209_6.00688773404605_14.3049172144186 chr5 149267097 149267519 + 14.3049172144186 NA intron (NM_001308462, intron 1 of 3) intron (NM_001308462, intron 1 of 3) 2304 NM_009663 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding unique_peak2_6_125_-2.1439397958547_5.90531002557257_14.3047518841785 chr13 45393853 45394719 + 14.3047518841785 NA intron (NM_153789, intron 2 of 6) intron (NM_153789, intron 2 of 6) 4544 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak1_55_615_-0.753609479490621_8.88998180094959_14.303963296215 chr9 66916990 66917766 + 14.303963296215 NA intron (NM_173413, intron 1 of 7) B3A|SINE|B2 2327 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding unique_peak1_18_16_2.51290136214655_5.34391352232361_14.302333338388 chr11 96925423 96925876 + 14.302333338388 NA Intergenic Intergenic -3675 NM_146026 217138 Mm.342551 NM_146026 ENSMUSG00000047040 Prr15l Atad4|BC022765|E230006A12Rik proline rich 15-like protein-coding common_peak1_70_773_-0.663030210297393_9.26467465099571_14.2987595398823 chr4 141139049 141139839 + 14.2987595398823 NA intron (NM_001277195, intron 1 of 3) CpG 352 NR_102344 213491 Mm.332006 NM_174996 ENSMUSG00000040842 Szrd1 1110022I03|D4Ertd22e SUZ RNA binding domain containing 1 protein-coding common_peak1_48_543_-0.810586604339655_8.68216953908051_14.2985252665112 chr8 94036335 94037077 + 14.2985252665112 NA promoter-TSS (NM_001093757) promoter-TSS (NM_001093757) 333 NM_026623 68219 Mm.354445 NM_026623 ENSMUSG00000031754 Nudt21 25kDa|3110048P04Rik|5730530J16Rik|AU014860|AW549947|Cpsf5 nudix (nucleoside diphosphate linked moiety X)-type motif 21 protein-coding common_peak1_45_126_1.1763884285077_7.57687890102602_14.2978399182633 chr5 113902096 113902967 + 14.2978399182633 NA intron (NM_011779, intron 1 of 10) B1_Mus1|SINE|Alu 6175 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak2_81_890_-0.61122604527014_9.49366859888685_14.2974408479905 chr17 25920076 25921250 + 14.2974408479905 NA promoter-TSS (NM_139154) promoter-TSS (NM_139154) -949 NM_139154 224624 Mm.328872 NM_139154 ENSMUSG00000025730 Rab40c RAR3 Rab40C, member RAS oncogene family protein-coding common_peak2_26_321_-1.10870931127502_7.77656222247711_14.2920041233408 chr3 93505763 93507424 + 14.2920041233408 NA Intergenic Intergenic -13903 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding common_peak2_533_4975_0.222994425973225_12.3922679831172_14.2884460234374 chr6 17064330 17068724 + 14.2884460234374 NA intron (NM_207176, intron 1 of 6) intron (NM_207176, intron 1 of 6) 1378 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding common_peak2_123_1355_-0.485234636029325_10.1625241451217_14.28747336976 chr5 150664473 150666265 + 14.28747336976 NA intron (NM_201369, intron 1 of 5) CpG 243 NM_201369 381695 Mm.246934 NM_201369 ENSMUSG00000029655 N4bp2l2 2700092H06Rik|zag1 NEDD4 binding protein 2-like 2 protein-coding common_peak1_225_2566_-0.343735771216659_11.1539996949671_14.2857533140646 chr3 69003986 69006619 + 14.2857533140646 NA promoter-TSS (NM_026641) promoter-TSS (NM_026641) 330 NM_133786 70099 Mm.206841 NM_133786 ENSMUSG00000034349 Smc4 2500002A22Rik|C79747|SMC-4|Smc4l1 structural maintenance of chromosomes 4 protein-coding common_peak1_46_523_-0.830291914111433_8.61827704448173_14.285242036801 chr8 122184913 122185742 + 14.285242036801 NA Intergenic Intergenic -96814 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_178_1995_-0.393351419914492_10.76622029538_14.2822712902455 chr18 34780254 34786246 + 14.2822712902455 NA intron (NM_001081256, intron 1 of 23) intron (NM_001081256, intron 1 of 23) 6242 NM_001081256 277250 Mm.277906 NM_029518 ENSMUSG00000038773 Kdm3b 5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082 KDM3B lysine (K)-specific demethylase 3B protein-coding common_peak1_102_1120_-0.539022679028687_9.86105922329108_14.2797411732632 chr18 38349589 38350832 + 14.2797411732632 NA Intergenic Intergenic -11217 NM_011937 26384 Mm.22374 NM_011937 ENSMUSG00000052102 Gnpda1 GNPDA|Gnp1|Gnpi|oscillin glucosamine-6-phosphate deaminase 1 protein-coding common_peak1_118_1298_-0.496113345208236_10.0951290428438_14.2772069512362 chr1 36761836 36762856 + 14.2772069512362 NA intron (NM_009539, intron 1 of 12) intron (NM_009539, intron 1 of 12) 548 NM_009539 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak2_84_923_-0.600107193563566_9.55169544463427_14.2762593602742 chr11 115611987 115613895 + 14.2762593602742 NA promoter-TSS (NM_001243587) promoter-TSS (NM_001243587) 28 NM_001243584 69674 Mm.390387 NM_027162 ENSMUSG00000020743 Mif4gd 1110014L05Rik|2310075G12Rik MIF4G domain containing protein-coding common_peak1_200_1309_0.419327119878194_10.5650146563639_14.2719385703832 chr5 36838901 36840315 + 14.2719385703832 NA Intergenic MLT1C|LTR|ERVL-MaLR -8959 NM_008550 17160 Mm.761 NM_008550 ENSMUSG00000029119 Man2b2 mKIAA0935 mannosidase 2, alpha B2 protein-coding common_peak2_200_1309_0.419327119878194_10.5650146563639_14.2719385703832 chr18 10725017 10727158 + 14.2719385703832 NA 5' UTR (NM_144860, exon 1 of 21) 5' UTR (NM_144860, exon 1 of 21) 462 NM_144860 225164 Mm.21500 NM_144860 ENSMUSG00000024294 Mib1 DIP-1|E430019M12Rik|Mib|mKIAA1323 mindbomb E3 ubiquitin protein ligase 1 protein-coding common_peak1_159_943_0.488328111828004_10.1268071052758_14.2716525676694 chr7 100854740 100856872 + 14.2716525676694 NA intron (NM_177073, intron 1 of 10) intron (NM_177073, intron 1 of 10) 7607 NM_177073 320100 Mm.40336 NM_177073 ENSMUSG00000008318 Relt E430021K24Rik|Tnfrsf19l RELT tumor necrosis factor receptor protein-coding common_peak1_105_510_0.645174595691847_9.31976677878355_14.2709634667023 chr2 164496992 164498160 + 14.2709634667023 NA promoter-TSS (NM_133779) promoter-TSS (NM_133779) 51 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak1_35_78_1.42751692488192_7.01753921061806_14.2708908742741 chr16 90197494 90198106 + 14.2708908742741 NA Intergenic ORR1G|LTR|ERVL-MaLR -22942 NM_011434 20655 Mm.276325 NM_011434 ENSMUSG00000022982 Sod1 B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1 superoxide dismutase 1, soluble protein-coding unique_peak1_35_78_1.42751692488192_7.01753921061806_14.2708908742741 chr4 143171619 143172654 + 14.2708908742741 NA intron (NM_001081355, intron 4 of 9) intron (NM_001081355, intron 4 of 9) -35974 NR_105988 102465618 NR_105988 ENSMUSG00000106597 Mir7021 mmu-mir-7021 microRNA 7021 ncRNA common_peak2_418_3600_0.260404546126406_11.9443841572535_14.2705470286872 chr14 102979486 102983879 + 14.2705470286872 NA TTS (NR_039592) TTS (NR_039592) 950 NR_039592 100628599 NR_039592 ENSMUSG00000092901 Mir5130 mir-5130|mmu-mir-5130|mu-mir-5130 microRNA 5130 ncRNA common_peak1_56_625_-0.745520127382445_8.9172587832414_14.2690905682083 chr13 55428782 55429429 + 14.2690905682083 NA Intergenic Intergenic -2301 NM_021489 58992 Mm.42224 NM_021489 ENSMUSG00000021492 F12 FXII|HAF coagulation factor XII (Hageman factor) protein-coding common_peak2_37_431_-0.927910987580222_8.29093200837336_14.2637021666951 chr13 51812996 51814968 + 14.2637021666951 NA Intergenic Intergenic -20235 NM_013660 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_227_1564_0.385776400102907_10.8048351418714_14.2631257404496 chr4 147904059 147905245 + 14.2631257404496 NA promoter-TSS (NM_001285923) promoter-TSS (NM_001285923) 46 NM_001285923 170731 Mm.154312 NM_133201 ENSMUSG00000029020 Mfn2 D630023P19Rik|Fzo mitofusin 2 protein-coding unique_peak2_2_82_-3.0411008968139_4.85448898293998_14.2600453764239 chrX 48409788 48410477 + 14.2600453764239 NA TTS (NM_019680) TTS (NM_019680) 53000 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak1_42_111_1.23837224819635_7.42654104615578_14.2598403107167 chr1 132013511 132014539 + 14.2598403107167 NA intron (NM_007923, intron 1 of 4) B3A|SINE|B2 6420 NM_007923 13714 Mm.254233 NM_007923 ENSMUSG00000026436 Elk4 2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1 ELK4, member of ETS oncogene family protein-coding common_peak2_501_4584_0.231703773517937_12.2785579052414_14.258073777463 chr14 27375347 27385267 + 14.258073777463 NA intron (NM_001289688, intron 3 of 9) intron (NM_001289688, intron 3 of 9) 18918 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_183_2054_-0.386624940916466_10.8116102081108_14.2552901457027 chr6 120081908 120084242 + 14.2552901457027 NA Intergenic MIR3|SINE|MIR -10305 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak1_31_371_-1.01629323679651_8.03101219270978_14.254271857025 chrX 42505138 42505880 + 14.254271857025 NA intron (NM_001313691, intron 1 of 3) intron (NM_001313691, intron 1 of 3) 187 NM_001313691 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak1_146_834_0.515378365702553_9.96332157021269_14.2517096842397 chr16 38346405 38347693 + 14.2517096842397 NA promoter-TSS (NM_001017429) promoter-TSS (NM_001017429) 50 NM_001017429 12856 Mm.27396 NM_001017429 ENSMUSG00000046516 Cox17 AI037035 cytochrome c oxidase assembly protein 17 protein-coding common_peak1_256_2952_-0.318363991977279_11.3687836451453_14.2500586046402 chr19 5566789 5569608 + 14.2500586046402 NA 5' UTR (NM_001033448, exon 1 of 2) 5' UTR (NM_001033448, exon 1 of 2) 124 NM_001033448 381201 Mm.441906 NM_001033448 ENSMUSG00000049562 Ap5b1 Gm962 adaptor-related protein complex 5, beta 1 subunit protein-coding common_peak2_104_503_0.648300307176903_9.30143007708837_14.2500203214225 chr17 56218071 56219593 + 14.2500203214225 NA promoter-TSS (NM_172624) promoter-TSS (NM_172624) 57 NM_172624 224897 Mm.205535 NM_172624 ENSMUSG00000001229 Dpp9 6430584G11Rik|A330078I11|DPP IX|DPRP2 dipeptidylpeptidase 9 protein-coding common_peak2_323_2543_0.306683750081236_11.466224830325_14.2497534104946 chr12 82243758 82247986 + 14.2497534104946 NA intron (NM_001167983, intron 2 of 23) L1M4c|LINE|L1 -65477 NM_172579 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak1_29_351_-1.05077518603959_7.9340440256175_14.2443184113569-2 chr4 41722543 41723195 + 14.2443184113569 NA TTS (NM_001017362) TTS (NM_001017362) 294 NM_001159565 53598 Mm.29025 NM_016890 ENSMUSG00000028447 Dctn3 p24 dynactin 3 protein-coding common_peak1_29_351_-1.05077518603959_7.9340440256175_14.2443184113569 chr11 26387167 26387476 + 14.2443184113569 NA intron (NM_001277273, intron 1 of 13) CpG 237 NR_102382 67030 Mm.18875 NM_025923 ENSMUSG00000004018 Fancl 2010322C19Rik|AW554273|B230118H11Rik|Phf9|Pog|gcd Fanconi anemia, complementation group L protein-coding common_peak1_386_3236_0.273554552351344_11.7972189263848_14.2434229817416 chr5 107722729 107727112 + 14.2434229817416 NA promoter-TSS (NM_010278) promoter-TSS (NM_010278) -577 NM_010278 14581 Mm.2078 NM_010278 ENSMUSG00000029275 Gfi1 AW495828|Gfi-1|Pal-1|Pal1 growth factor independent 1 protein-coding common_peak2_148_850_0.511909680421658_9.98897016189679_14.243242050148 chr18 75454089 75456997 + 14.243242050148 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -59102 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA common_peak1_194_2186_-0.373688468561912_10.9078932707671_14.2408064582481 chr16 11252966 11254412 + 14.2408064582481 NA TTS (NR_035466) TTS (NR_035466) 636 NM_001130008 14852 Mm.325827 NM_146066 ENSMUSG00000062203 Gspt1 AI314175|AI326449|AV307676|C79774|G1st|Gst-1 G1 to S phase transition 1 protein-coding common_peak1_170_1899_-0.403150467514852_10.6902084694609_14.2393033776067 chr13 97440873 97443641 + 14.2393033776067 NA intron (NR_110432, intron 1 of 1) intron (NR_110432, intron 1 of 1) 7287 NR_110432 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 ENSMUSG00000078952|Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA common_peak1_57_635_-0.73760732958543_8.94407929049164_14.2372296080171 chr10 81505498 81506455 + 14.2372296080171 NA intron (NM_010304, intron 6 of 6) intron (NM_010304, intron 6 of 6) -5839 NM_010102 13611 Mm.33065 NM_010102 ENSMUSG00000044199 S1pr4 Edg6|Lpc1|S1p4 sphingosine-1-phosphate receptor 4 protein-coding common_peak2_35_410_-0.95169691062266_8.20714612837035_14.2286517929582 chr18 74772712 74773993 + 14.2286517929582 NA Intergenic ORR1B1|LTR|ERVL-MaLR 5103 NR_028560 100217466 NR_028560 Scarna17 MBII-119 small Cajal body-specific RNA 17 ncRNA common_peak1_23_291_-1.17604909078792_7.60180001348606_14.2278586309201 chr3 106784677 106785221 + 14.2278586309201 NA intron (NM_007651, intron 1 of 7) intron (NM_007651, intron 1 of 7) 5200 NM_007651 12508 Mm.316861 NM_007651 ENSMUSG00000040747 Cd53 AI323659|Ox-44|Tspan25 CD53 antigen protein-coding common_peak1_23_291_-1.17604909078792_7.60180001348606_14.2278586309201-2 chrX 7649046 7649514 + 14.2278586309201 NA intron (NM_009305, intron 6 of 6) intron (NM_009305, intron 6 of 6) -8099 NM_001290624 54630 Mm.232232 NM_175097 ENSMUSG00000031145 Prickle3 Lmo6|Sfc16 prickle planar cell polarity protein 3 protein-coding unique_peak2_23_291_-1.17604909078792_7.60180001348606_14.2278586309201 chr7 66272890 66274403 + 14.2278586309201 NA intron (NM_146191, intron 26 of 33) ORR1F|LTR|ERVL-MaLR 108078 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_79_328_0.782415076268247_8.75315131186936_14.2268251057054 chr11 58210536 58211872 + 14.2268251057054 NA Intergenic Intergenic -3773 NM_019440 54396 Mm.458517 NM_019440 ENSMUSG00000069874 Irgm2 AI481100|GTPI|Ifggd2|Iigp2 immunity-related GTPase family M member 2 protein-coding common_peak2_64_709_-0.694760694059148_9.12429486736247_14.2202826538761 chr11 30186528 30188930 + 14.2202826538761 NA intron (NM_175836, intron 1 of 34) intron (NM_175836, intron 1 of 34) 10528 NM_009260 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak2_70_270_0.851010504493146_8.50765429360044_14.2195372343331 chr5 104957502 104959143 + 14.2195372343331 NA intron (NM_030239, intron 10 of 15) intron (NM_030239, intron 10 of 15) 24395 NM_030239 27405 Mm.389663 NM_030239 ENSMUSG00000029299 Abcg3 Abcp2|Mxr2 ATP-binding cassette, sub-family G (WHITE), member 3 protein-coding common_peak2_114_1252_-0.50460430835003_10.0388685451468_14.2195193121924 chrX 48437875 48442725 + 14.2195193121924 NA intron (NM_019680, intron 1 of 8) PB1D9|SINE|Alu 22832 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak1_142_801_0.524731920127508_9.90982438651867_14.2179010943336 chr2 170511106 170511861 + 14.2179010943336 NA non-coding (NR_040367, exon 1 of 3) non-coding (NR_040367, exon 1 of 3) 253 NM_001199902 109054 Mm.28808 NM_001013369 ENSMUSG00000052033 Pfdn4 0610025M10Rik|1810063B06Rik|C-1|C1|Pfd4 prefoldin 4 protein-coding common_peak1_86_375_0.738208978988215_8.92369334117175_14.2121021754379 chr2 156839601 156840906 + 14.2121021754379 NA intron (NM_001291124, intron 1 of 3) CpG 246 NM_173396 228839 Mm.315625 NM_173396 ENSMUSG00000062175 Tgif2 4921501K24|5730599O09Rik|C80753|C81206 TGFB-induced factor homeobox 2 protein-coding common_peak2_102_489_0.654909944774168_9.26409291138966_14.2107183299263 chr6 122339101 122340600 + 14.2107183299263 NA promoter-TSS (NM_001042623) promoter-TSS (NM_001042623) -193 NM_007905 13619 Mm.6822 NM_007905 ENSMUSG00000040669 Phc1 AW557034|Edr|Edr1|Mph1|Rae-28|rae28 polyhomeotic-like 1 (Drosophila) protein-coding common_peak1_61_215_0.938407013757194_8.22409100904207_14.2100513891411 chr8 33898085 33899369 + 14.2100513891411 NA intron (NM_001286168, intron 1 of 7) B1_Mus1|SINE|Alu 31136 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak2_88_389_0.725688055014578_8.9701743412569_14.2082192919755 chrX 104413018 104414478 + 14.2082192919755 NA promoter-TSS (NM_009592) promoter-TSS (NM_009592) 98 NM_009592 11306 Mm.426128 NM_009592 ENSMUSG00000031333 Abcb7 AA517758|AU019072|Abc7 ATP-binding cassette, sub-family B (MDR/TAP), member 7 protein-coding unique_peak1_20_22_2.25391268774148_5.65051829992776_14.2077248496306 chr8 72272062 72272565 + 14.2077248496306 NA Intergenic Intergenic 32181 NM_007456 11767 Mm.290086 NM_007456 ENSMUSG00000003033 Ap1m1 AA408894|AP47|Adtm1A|Cltnm|mu1A adaptor-related protein complex AP-1, mu subunit 1 protein-coding common_peak2_82_900_-0.60587742664519_9.51244458249094_14.207408281803 chr16 32200028 32201837 + 14.207408281803 NA Intergenic Intergenic 21132 NM_001033539 328660 Mm.441006 NM_001033539 ENSMUSG00000075269 Bex6 B020003O03Rik brain expressed family member 6 protein-coding common_peak2_238_1671_0.373745382011695_10.8942318230867_14.2064452649042 chr3 132683182 132685030 + 14.2064452649042 NA promoter-TSS (NM_001163455) promoter-TSS (NM_001163455) -38 NM_001163455 271981 Mm.257864 NM_173032 ENSMUSG00000028030 Tbck 1700120J03Rik|9430001M19|A630047E20Rik|C030007I09Rik|Tbckl TBC1 domain containing kinase protein-coding common_peak1_80_879_-0.615017630531781_9.47385089825877_14.2052284930063 chr2 25460309 25461039 + 14.2052284930063 NA exon (NM_153557, exon 2 of 7) exon (NM_153557, exon 2 of 7) 420 NM_153557 227622 Mm.261780 NM_153557 ENSMUSG00000047617 BC029214 D930050G13Rik|Paxx cDNA sequence BC029214 protein-coding common_peak2_61_677_-0.711846947215681_9.0492179895285_14.2046222970816 chr17 46152497 46154093 + 14.2046222970816 NA intron (NM_025649, intron 1 of 2) intron (NM_025649, intron 1 of 2) 256 NM_025649 66591 Mm.272024 NM_025649 ENSMUSG00000034509 Mad2l1bp 0610009D16Rik|2510031P20Rik|AU018945|AW550977|C76045|CMT2A|CMT2B|Mad2lbp|mKIAA0110 MAD2L1 binding protein protein-coding common_peak2_100_1096_-0.542499616797736_9.82809800200432_14.1981276707739 chr15 73511107 73514009 + 14.1981276707739 NA promoter-TSS (NM_001081066) promoter-TSS (NM_001081066) -2 NM_001081066 105841 Mm.322557 NM_001081066 ENSMUSG00000036661 Dennd3 AI447457|E030003N15Rik DENN/MADD domain containing 3 protein-coding common_peak2_358_2924_0.286872189889385_11.6576570043028_14.1961417731237 chr3 61362890 61366868 + 14.1961417731237 NA 5' UTR (NM_028712, exon 1 of 1) 5' UTR (NM_028712, exon 1 of 1) 372 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding unique_peak2_10_164_-1.73313678273822_6.49975382287671_14.1957928676526 chr10 8534914 8536150 + 14.1957928676526 NA Intergenic Intergenic -16707 NM_177387 338362 Mm.41163 NM_177387 ENSMUSG00000047712 Ust D930010O20Rik|UA2OST uronyl-2-sulfotransferase protein-coding unique_peak2_10_164_-1.73313678273822_6.49975382287671_14.1957928676526-2 chr9 110732570 110733483 + 14.1957928676526 NA intron (NM_001083936, intron 1 of 13) intron (NM_001083936, intron 1 of 13) 9584 NM_001083936 19228 Mm.3542 NM_011199 ENSMUSG00000032492 Pth1r PPR|Pthr|Pthr1 parathyroid hormone 1 receptor protein-coding common_peak1_34_400_-0.966012711931386_8.16445207048923_14.1957137552433 chr3 20222973 20223533 + 14.1957137552433 NA promoter-TSS (NR_105974) promoter-TSS (NR_105974) -894 NR_105974 102465609 NR_105974 ENSMUSG00000099105 Mir7007 Gm27897|mmu-mir-7007 microRNA 7007 ncRNA unique_peak2_34_400_-0.966012711931386_8.16445207048923_14.1957137552433 chr8 117120648 117122179 + 14.1957137552433 NA intron (NM_001163028, intron 7 of 11) intron (NM_001163028, intron 7 of 11) 25548 NM_001163028 63857 Mm.174133 NM_021486 ENSMUSG00000031845 Bco1 Bcdo|Bcdo1|Bcmo1|CMO1|Cmoi|beta-CD|betaCMOOX beta-carotene oxygenase 1 protein-coding common_peak1_48_542_-0.807932150893677_8.68084231235752_14.1937899525779 chr5 114127547 114128446 + 14.1937899525779 NA 5' UTR (NM_175016, exon 1 of 4) 5' UTR (NM_175016, exon 1 of 4) 180 NM_175016 231642 Mm.332593 NM_175016 ENSMUSG00000044339 Alkbh2 9530023G02|AU016977|Abh2|mABH2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase protein-coding common_peak1_112_563_0.615968145773607_9.4475354252856_14.1919239766353 chr8 95080015 95080781 + 14.1919239766353 NA promoter-TSS (NM_028805) promoter-TSS (NM_028805) -803 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding common_peak2_48_142_1.1170049001323_7.71837378684454_14.1910854920572 chr1 128704525 128705663 + 14.1910854920572 NA Intergenic Intergenic -112795 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_58_646_-0.732095496950683_8.97157415351717_14.1808022647616 chr17 87672465 87673266 + 14.1808022647616 NA intron (NM_008628, intron 1 of 15) CpG 308 NM_008628 17685 Mm.4619 NM_008628 ENSMUSG00000024151 Msh2 AI788990 mutS homolog 2 protein-coding common_peak1_50_153_1.08088423643256_7.80722865891118_14.1804135303761 chr1 180195134 180196009 + 14.1804135303761 NA intron (NM_023341, intron 1 of 14) intron (NM_023341, intron 1 of 14) 449 NM_023341 67426 Mm.38330 NM_023341 ENSMUSG00000026489 Coq8a 4632432J16Rik|AI462003|Adck3|Cabc1|mKIAA0451 coenzyme Q8A protein-coding common_peak1_228_1575_0.383416075301797_10.8137598571073_14.1780283212968 chr10 80074015 80076700 + 14.1780283212968 NA intron (NM_183426, intron 4 of 31) intron (NM_183426, intron 4 of 31) 21338 NM_001037741 625249 Mm.332810 NM_008162 ENSMUSG00000075706 Gpx4 GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx glutathione peroxidase 4 protein-coding common_peak2_331_2630_0.301334958375172_11.5120630123535_14.1768957002776 chr6 71439086 71441964 + 14.1768957002776 NA 5' UTR (NM_024288, exon 1 of 9) 5' UTR (NM_024288, exon 1 of 9) 112 NM_024288 68477 Mm.28474 NM_024288 ENSMUSG00000002222 Rmnd5a 1110007A06Rik|AJ237586|AW125795|Gid2|MTA.D02.090 required for meiotic nuclear division 5 homolog A protein-coding common_peak1_62_221_0.927193293601676_8.25801251315094_14.1762084075649 chr6 133105118 133105838 + 14.1762084075649 NA exon (NM_001271582, exon 1 of 2) exon (NM_001271582, exon 1 of 2) 239 NR_073368 381820 Mm.291762 NM_001163445 ENSMUSG00000072704 Smim10l1 2700089E24Rik|AI662692 small integral membrane protein 10 like 1 protein-coding common_peak2_111_1218_-0.511693038229575_9.99563589150543_14.1752830046827 chr9 100459346 100463025 + 14.1752830046827 NA intron (NM_001033543, intron 6 of 6) MLT1A0|LTR|ERVL-MaLR 25288 NM_001033543 213208 Mm.242896 NM_001033543 ENSMUSG00000044244 Il20rb AV228068|Fndc6|Gm186|Il20R2 interleukin 20 receptor beta protein-coding common_peak1_24_301_-1.15238954718869_7.66220996573073_14.1705568568458-2 chr8 122700059 122700747 + 14.1705568568458 NA Intergenic Intergenic -1294 NM_009824 12398 Mm.194339 NM_009824 ENSMUSG00000006362 Cbfa2t3 A630044F12Rik|AI465270|AW229127|Cbfa2t3h|ETO-2|Eto2|MTGR2 core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) protein-coding common_peak1_24_301_-1.15238954718869_7.66220996573073_14.1705568568458 chr11 53851297 53851878 + 14.1705568568458 NA intron (NR_033332, intron 1 of 3) B4|SINE|B4 7669 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA unique_peak2_21_271_-1.22766509855639_7.47363029197215_14.1672994325924 chr5 88764953 88765859 + 14.1672994325924 NA intron (NM_007832, intron 1 of 6) CpG 393 NM_007832 13178 Mm.298892 NM_007832 ENSMUSG00000029366 Dck - deoxycytidine kinase protein-coding common_peak2_67_740_-0.676568848958951_9.19504530782636_14.1626700996302 chr7 45703987 45705969 + 14.1626700996302 NA promoter-TSS (NM_016974) promoter-TSS (NM_016974) -269 NM_016974 13170 Mm.24222 NM_016974 ENSMUSG00000059824 Dbp - D site albumin promoter binding protein protein-coding common_peak2_754_7849_0.178149033197522_13.0275514552651_14.1593095376582 chr7 28807160 28813812 + 14.1593095376582 NA promoter-TSS (NM_177301) promoter-TSS (NM_177301) -404 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak2_284_3307_-0.29913921274278_11.5421739127999_14.1571351942239 chr6 54953199 54959058 + 14.1571351942239 NA intron (NM_172729, intron 1 of 11) MLTR73|LTR|ERV1 15533 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding unique_peak2_5_114_-2.28493920522499_5.70302044833188_14.1520783273591 chr19 10267396 10268231 + 14.1520783273591 NA intron (NM_198114, intron 5 of 19) intron (NM_198114, intron 5 of 19) -27065 NM_001033481 225908 Mm.329716 NM_001033481 ENSMUSG00000036098 Myrf 6030439E18|Gm1804|Gm98|Mrf myelin regulatory factor protein-coding common_peak1_232_1614_0.378793111292561_10.8467150052276_14.1504364904369 chr7 90351627 90353946 + 14.1504364904369 NA intron (NM_001289583, intron 2 of 19) intron (NM_001289583, intron 2 of 19) -34195 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_69_760_-0.663694617793656_9.23990533460672_14.1494590915123 chr8 13785369 13786152 + 14.1494590915123 NA exon (NM_025924, exon 1 of 9) exon (NM_025924, exon 1 of 9) 145 NM_025924 67031 Mm.44858 NM_025924 ENSMUSG00000038398 Upf3a 2600001C03Rik|4930546M19Rik|RENT3A|UPF3 UPF3 regulator of nonsense transcripts homolog A (yeast) protein-coding common_peak1_47_531_-0.814894656222737_8.64783510738982_14.1490176792253 chr17 87283978 87284767 + 14.1490176792253 NA intron (NM_028639, intron 1 of 19) intron (NM_028639, intron 1 of 19) 1486 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak2_329_2609_0.30220375426831_11.5009359685914_14.1474426482206 chr18 61554343 61557490 + 14.1474426482206 NA intron (NM_146087, intron 1 of 9) intron (NM_146087, intron 1 of 9) 334 NM_146087 93687 Mm.26908 NM_146087 ENSMUSG00000024576 Csnk1a1 2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a casein kinase 1, alpha 1 protein-coding common_peak1_63_227_0.916587871333139_8.29118394983131_14.1465948281847 chr2 52072656 52073716 + 14.1465948281847 NA exon (NM_175238, exon 2 of 36) exon (NM_175238, exon 2 of 36) 349 NM_175238 51869 Mm.254530 NM_175238 ENSMUSG00000036202 Rif1 5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e replication timing regulatory factor 1 protein-coding common_peak1_40_460_-0.887179675363913_8.40503310274738_14.1453561769948 chr16 32609005 32609577 + 14.1453561769948 NA intron (NM_011638, intron 1 of 18) CpG 395 NM_011638 22042 Mm.28683 NM_011638 ENSMUSG00000022797 Tfrc 2610028K12Rik|CD71|E430033M20Rik|Mtvr1|TFR|TFR1|TR|Trfr|p90 transferrin receptor protein-coding common_peak2_40_460_-0.887179675363913_8.40503310274738_14.1453561769948 chr3 51999578 52001172 + 14.1453561769948 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 104631 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like 3 (Drosophila) protein-coding common_peak1_763_7972_0.17668917459379_13.0492515410626_14.1383741357822 chr1 91053113 91058489 + 14.1383741357822 NA intron (NM_001310732, intron 1 of 24) intron (NM_001310732, intron 1 of 24) 2357 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_347_2805_0.291723159418666_11.6001608733292_14.1364080004242 chr17 44733728 44737316 + 14.1364080004242 NA exon (NM_001146038, exon 3 of 9) exon (NM_001146038, exon 3 of 9) 654 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_33_70_1.48040145265584_6.88994784583261_14.1335145066767 chr12 100502479 100503089 + 14.1335145066767 NA intron (NM_001033213, intron 1 of 19) intron (NM_001033213, intron 1 of 19) 18038 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding unique_peak1_21_25_2.15935802455286_5.78011873041752_14.1319914670002 chr17 7170046 7170512 + 14.1319914670002 NA 5' UTR (NM_011299, exon 1 of 21) 5' UTR (NM_011299, exon 1 of 21) 164 NM_011299 20112 Mm.268383 NM_011299 ENSMUSG00000023809 Rps6ka2 90kDa|D17Wsu134e|Rps6ka-rs1|Rsk3|p90rsk|pp90rsk ribosomal protein S6 kinase, polypeptide 2 protein-coding common_peak2_41_107_1.24919945282139_7.37948722857416_14.131921677557 chr8 124287700 124288608 + 14.131921677557 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 56760 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_162_971_0.47903194031559_10.1643284737636_14.1302307880917 chr18 77713007 77714695 + 14.1302307880917 NA promoter-TSS (NR_027978) promoter-TSS (NR_027978) 159 NM_178670 212163 Mm.23293 NM_178670 ENSMUSG00000047466 8030462N17Rik Akd2|Ark2N RIKEN cDNA 8030462N17 gene protein-coding common_peak1_85_931_-0.591846663213975_9.56826281304729_14.1298777686792 chr15 58887887 58888794 + 14.1298777686792 NA promoter-TSS (NM_175226) promoter-TSS (NM_175226) -889 NM_175226 75841 Mm.4537 NM_175226 ENSMUSG00000037075 Rnf139 4930555P18Rik ring finger protein 139 protein-coding common_peak1_64_708_-0.69272729690662_9.12327816878621_14.128665520144 chr16 15637440 15638342 + 14.128665520144 NA promoter-TSS (NM_011159) promoter-TSS (NM_011159) 25 NM_011159 19090 Mm.71 NM_011159 ENSMUSG00000022672 Prkdc AI326420|AU019811|DNA-PKcs|DNAPDcs|DNAPK|DNPK1|DOXNPH|HYRC1|XRCC7|dxnph|p460|scid|slip protein kinase, DNA activated, catalytic polypeptide protein-coding common_peak2_170_1897_-0.401631041317652_10.6894487563623_14.1268426737689 chr15 38281487 38284462 + 14.1268426737689 NA Intergenic MIR|SINE|MIR 17737 NM_013692 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding common_peak1_25_311_-1.12998097422132_7.72041173175159_14.1268251748364 chr7 101933346 101933871 + 14.1268251748364 NA intron (NM_027053, intron 1 of 5) intron (NM_027053, intron 1 of 5) 249 NM_027053 69358 Mm.214841 NM_027053 ENSMUSG00000064307 Lrrc51 1700008D07Rik|Lrtomt leucine rich repeat containing 51 protein-coding common_peak1_106_1161_-0.523423934048756_9.92068238638015_14.1178630044367 chr2 167924479 167925892 + 14.1178630044367 NA Intergenic Intergenic -7142 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_106_1161_-0.523423934048756_9.92068238638015_14.1178630044367-2 chr8 70695380 70696563 + 14.1178630044367 NA Intergenic Intergenic -1768 NM_010592 16478 Mm.419851 NM_010592 ENSMUSG00000071076 Jund Jund1 jun D proto-oncogene protein-coding common_peak2_118_610_0.592043800420914_9.55105047002919_14.115255166047 chr11 11556698 11559235 + 14.115255166047 NA Intergenic Intergenic 68700 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak2_224_2550_-0.342562959159521_11.1455657040227_14.1104271545643 chr10 53769884 53773191 + 14.1104271545643 NA Intergenic Intergenic -20628 NM_001081428 75906 Mm.436785 NM_001081428 ENSMUSG00000019856 Fam184a 3110012E06Rik|4930438C08Rik|4930589M24Rik family with sequence similarity 184, member A protein-coding unique_peak1_19_19_2.36920613274341_5.50653116125907_14.1093426870869-3 chr3 146765267 146765600 + 14.1093426870869 NA intron (NM_011100, intron 1 of 9) intron (NM_011100, intron 1 of 9) 4805 NM_001164198 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding unique_peak2_4_103_-2.46253011288303_5.46917466169958_14.1093426870869 chr10 59511328 59511876 + 14.1093426870869 NA intron (NM_001033259, intron 1 of 7) intron (NM_001033259, intron 1 of 7) -69823 NM_010959 18302 Mm.123013 NM_010959 ENSMUSG00000009654 Oit3 EF-9|LZP oncoprotein induced transcript 3 protein-coding unique_peak1_19_19_2.36920613274341_5.50653116125907_14.1093426870869-4 chr5 140513223 140513670 + 14.1093426870869 NA intron (NM_021528, intron 1 of 1) ZP3AR|Satellite|Satellite 7837 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding unique_peak1_19_19_2.36920613274341_5.50653116125907_14.1093426870869-2 chr17 73869068 73869594 + 14.1093426870869 NA Intergenic Intergenic 64490 NM_020578 57440 Mm.18526 NM_020578 ENSMUSG00000024065 Ehd3 Ehd2 EH-domain containing 3 protein-coding unique_peak1_19_19_2.36920613274341_5.50653116125907_14.1093426870869 chr1 88474391 88474812 + 14.1093426870869 NA Intergenic Intergenic 35465 NM_008132 14659 Mm.5187 NM_008132 ENSMUSG00000062310 Glrp1 GRP-1 glutamine repeat protein 1 protein-coding unique_peak2_4_103_-2.46253011288303_5.46917466169958_14.1093426870869-2 chr16 11157311 11158033 + 14.1093426870869 NA intron (NR_027502, intron 7 of 22) B3|SINE|B2 18721 NR_027502 106205 Mm.226860 NM_145931 ENSMUSG00000037965 Zc3h7a A430104C18Rik|AI447294|AW556219|HSPC055|Zc3h7|Zc3hdc7 zinc finger CCCH type containing 7 A protein-coding common_peak2_55_613_-0.748917784165897_8.88763595328723_14.1071321791648 chr1 171037732 171038889 + 14.1071321791648 NA Intergenic CpG 19384 NM_144559 246256 Mm.251254 NM_144559 ENSMUSG00000059089 Fcgr4 4833442P21Rik|CD16-2|FcgRIV|FcgammaRIV|Fcgr3a|Fcrl3 Fc receptor, IgG, low affinity IV protein-coding unique_peak2_36_420_-0.937892771854985_8.2487300371389_14.1027356189277 chr17 71826186 71827959 + 14.1027356189277 NA intron (NR_073185, intron 9 of 16) intron (NR_073185, intron 9 of 16) 45125 NM_030179 78785 Mm.196382 NM_030179 ENSMUSG00000024059 Clip4 1700024K14Rik|1700074B05Rik|4833417L20Rik|5830409B12Rik|Rsnl2 CAP-GLY domain containing linker protein family, member 4 protein-coding common_peak2_154_903_0.494608829197439_10.0674833770139_14.0974203379328 chr7 126897093 126898834 + 14.0974203379328 NA intron (NM_026827, intron 1 of 5) intron (NM_026827, intron 1 of 5) 315 NM_026827 68742 Mm.248646 NM_026827 ENSMUSG00000060538 Tmem219 1110032O16Rik|2900045G02Rik|IGFBP-3R transmembrane protein 219 protein-coding common_peak1_57_192_0.982818588430844_8.0838663314835_14.0948707673032 chr1 52726586 52727520 + 14.0948707673032 NA 5' UTR (NM_178081, exon 1 of 6) 5' UTR (NM_178081, exon 1 of 6) 265 NM_178081 98682 Mm.491173 NM_133829 ENSMUSG00000041439 Mfsd6 2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2 major facilitator superfamily domain containing 6 protein-coding common_peak1_198_2232_-0.367785741975055_10.9408746648349_14.0911613166225 chr12 102317822 102320051 + 14.0911613166225 NA intron (NM_001161365, intron 2 of 9) intron (NM_001161365, intron 2 of 9) 35295 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_391_3296_0.269774998799363_11.8218256710701_14.0900275787248 chr11 107446701 107453675 + 14.0900275787248 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 20532 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_37_88_1.35124308361685_7.15135497277482_14.0899989181477 chr2 132144326 132145089 + 14.0899989181477 NA intron (NM_018824, intron 1 of 15) CpG 401 NM_018824 54338 Mm.103581 NM_018824 ENSMUSG00000027340 Slc23a2 AI844736|NBTL1|SVCT2|Slc23a1|YSPL2|YSPL3|mKIAA0238 solute carrier family 23 (nucleobase transporters), member 2 protein-coding unique_peak1_13_5_3.47498993811041_4.32245746977636_14.0891117430547-2 chr15 59728341 59728709 + 14.0891117430547 NA Intergenic Intergenic 66434 NR_045076 100503021 Mm.402924 NR_045076 Gm19510 - predicted gene, 19510 ncRNA unique_peak1_13_5_3.47498993811041_4.32245746977636_14.0891117430547 chr1 126762951 126763335 + 14.0891117430547 NA intron (NM_176957, intron 1 of 12) intron (NM_176957, intron 1 of 12) 67489 NM_001081756 210356 Mm.377234 NM_172484 ENSMUSG00000049690 Nckap5 8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5 NCK-associated protein 5 protein-coding common_peak2_51_159_1.06010546093993_7.85198082535732_14.0887493363469 chr1 180195123 180196085 + 14.0887493363469 NA intron (NM_023341, intron 1 of 14) intron (NM_023341, intron 1 of 14) 416 NM_023341 67426 Mm.38330 NM_023341 ENSMUSG00000026489 Coq8a 4632432J16Rik|AI462003|Adck3|Cabc1|mKIAA0451 coenzyme Q8A protein-coding common_peak1_104_1139_-0.529237878375286_9.89019916986446_14.0879483519738 chr7 80505806 80507374 + 14.0879483519738 NA intron (NM_007550, intron 4 of 21) ORR1B2|LTR|ERVL-MaLR 28408 NM_007550 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding common_peak1_147_1626_-0.434990262088403_10.4505034046283_14.0868291486606 chr11 118265566 118267111 + 14.0868291486606 NA intron (NM_001033528, intron 15 of 20) intron (NM_001033528, intron 15 of 20) -17746 NM_011180 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_23_290_-1.17109987481619_7.59932540550019_14.0864145752946 chr13 30614433 30614913 + 14.0864145752946 NA promoter-TSS (NR_045975) promoter-TSS (NR_045975) -370 NR_045975 75090 Mm.292232 NR_045975 ENSMUSG00000086263 4930519D14Rik - RIKEN cDNA 4930519D14 gene ncRNA common_peak1_50_562_-0.789320334952773_8.74233094460384_14.085699505842-3 chr6 129591005 129592118 + 14.085699505842 NA promoter-TSS (NM_010654) promoter-TSS (NM_010654) -250 NM_010654 16643 Mm.391515 NM_010654 ENSMUSG00000030165 Klrd1 CD94 killer cell lectin-like receptor, subfamily D, member 1 protein-coding common_peak1_50_562_-0.789320334952773_8.74233094460384_14.085699505842-2 chr12 80791949 80792968 + 14.085699505842 NA intron (NM_178682, intron 1 of 5) intron (NM_178682, intron 1 of 5) 1926 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding common_peak1_50_562_-0.789320334952773_8.74233094460384_14.085699505842 chr11 69070090 69070996 + 14.085699505842 NA promoter-TSS (NM_028336) promoter-TSS (NM_028336) -266 NM_025838 66910 Mm.33964 NM_025838 ENSMUSG00000020895 Tmem107 1110004B13Rik|2810049P21Rik transmembrane protein 107 protein-coding common_peak1_58_645_-0.729863949652099_8.97045837986787_14.0850261522779 chr2 166753928 166754954 + 14.0850261522779 NA Intergenic ORR1E|LTR|ERVL-MaLR -39326 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding unique_peak2_22_281_-1.20109054830528_7.53900607824615_14.0838813396012 chr3 104855328 104857302 + 14.0838813396012 NA intron (NM_009797, intron 1 of 9) ORR1B2|LTR|ERVL-MaLR 8190 NM_009797 12340 Mm.19142 NM_009797 ENSMUSG00000070372 Capza1 CAPZ|CAZ1|Cappa1 capping protein (actin filament) muscle Z-line, alpha 1 protein-coding common_peak2_75_823_-0.632911701413615_9.37004467647641_14.0832276699368 chr14 79451221 79452851 + 14.0832276699368 NA 5' UTR (NM_001034882, exon 1 of 1) 5' UTR (NM_001034882, exon 1 of 1) 201 NM_001034882 432879 Mm.308666 NM_001034882 ENSMUSG00000075502 Kbtbd6 EG432879|Gm5465|Zbtbd6 kelch repeat and BTB (POZ) domain containing 6 protein-coding common_peak2_106_519_0.636602606327319_9.34066911619211_14.0783578298763 chr10 58322612 58324647 + 14.0783578298763 NA 5' UTR (NM_026148, exon 1 of 10) 5' UTR (NM_026148, exon 1 of 10) 163 NM_026148 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak2_267_1962_0.344923865056264_11.1113063899943_14.0772041595561 chr11 120989359 120991925 + 14.0772041595561 NA intron (NM_027874, intron 1 of 9) intron (NM_027874, intron 1 of 9) 691 NM_139059 104318 Mm.216227 NM_027874 ENSMUSG00000025162 Csnk1d 1200006A05Rik|AA409348|D930010H05Rik casein kinase 1, delta protein-coding common_peak1_122_1340_-0.483515740685764_10.1473356515616_14.0753691645927 chr2 166030125 166031918 + 14.0753691645927 NA intron (NM_008679, intron 1 of 22) intron (NM_008679, intron 1 of 22) 38384 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding unique_peak1_14_7_3.18204412141135_4.59102206070567_14.0744857583201-2 chr8 125226396 125226841 + 14.0744857583201 NA intron (NM_174853, intron 9 of 11) intron (NM_174853, intron 9 of 11) 172423 NM_174854 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding unique_peak1_14_7_3.18204412141135_4.59102206070567_14.0744857583201 chr8 35681662 35682074 + 14.0744857583201 NA Intergenic Intergenic -92848 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_83_356_0.750919002142112_8.85523976510015_14.0737683456445 chr6 116192789 116193667 + 14.0737683456445 NA intron (NM_177412, intron 1 of 5) CpG 146 NM_177412 330401 Mm.425352 NM_177412 ENSMUSG00000030126 Tmcc1 3632431M01Rik|mKIAA0779 transmembrane and coiled coil domains 1 protein-coding common_peak1_118_1295_-0.49277763264498_10.0934611865621_14.0733904777437 chr5 150664526 150665679 + 14.0733904777437 NA intron (NM_201369, intron 1 of 5) intron (NM_201369, intron 1 of 5) 510 NM_201369 381695 Mm.246934 NM_201369 ENSMUSG00000029655 N4bp2l2 2700092H06Rik|zag1 NEDD4 binding protein 2-like 2 protein-coding common_peak1_144_1592_-0.440761650134419_10.4171497264581_14.070582522952 chr2 90940351 90941412 + 14.070582522952 NA intron (NM_198683, intron 1 of 13) CpG 484 NM_017368 13046 Mm.29495 NM_017368 ENSMUSG00000005506 Celf1 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp1|D2Wsu101e|HNAB50|NAB50 CUGBP, Elav-like family member 1 protein-coding common_peak1_93_1018_-0.563194937553439_9.71134086738909_14.0640974723031 chr17 3556824 3558333 + 14.0640974723031 NA promoter-TSS (NR_045303) promoter-TSS (NR_045303) 135 NM_146074 224481 Mm.226554 NM_146074 ENSMUSG00000036983 Tfb1m AI429207 transcription factor B1, mitochondrial protein-coding common_peak1_153_895_0.495978929901819_10.0553443870085_14.0632539105425 chr15 102135377 102136750 + 14.0632539105425 NA intron (NM_001033277, intron 1 of 10) CpG 152 NM_001033277 223918 Mm.385009 NM_001033277 ENSMUSG00000036966 Spryd3 BC008150 SPRY domain containing 3 protein-coding common_peak2_52_164_1.0494195511973_7.89103198984446_14.0626661723146 chr2 177839651 177840589 + 14.0626661723146 NA intron (NM_001024849, intron 1 of 3) RMER17B|LTR|ERVK 198 NM_001024849 329575 Mm.425123 NM_001024849 ENSMUSG00000095362 Gm14325 OTTMUSG00000016325 predicted gene 14325 protein-coding common_peak1_78_855_-0.61936789528783_9.43178303875723_14.0611639148714 chr5 73256749 73257754 + 14.0611639148714 NA promoter-TSS (NM_028194) promoter-TSS (NM_028194) -633 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_127_681_0.562462267660063_9.6948590628542_14.058840151658 chr11 72300819 72302643 + 14.058840151658 NA intron (NM_001291153, intron 1 of 3) intron (NM_001291153, intron 1 of 3) 102 NM_001037713 327959 Mm.291131 NM_001037713 ENSMUSG00000040483 Xaf1 Fbox39 XIAP associated factor 1 protein-coding common_peak2_127_681_0.562462267660063_9.6948590628542_14.058840151658 chr15 27701600 27703803 + 14.058840151658 NA Intergenic Intergenic -21159 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding unique_peak2_18_241_-1.3184990338777_7.25961372033574_14.0582893206113 chr4 101235234 101236949 + 14.0582893206113 NA intron (NM_146145, intron 1 of 24) B4A|SINE|B4 29191 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_65_240_0.891042922617275_8.3584107975386_14.0575195076691 chr6 127562691 127564460 + 14.0575195076691 NA Intergenic Intergenic -14400 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak1_16_222_-1.39736363894613_7.10221808044724_14.0567264067666 chr10 111997483 111997870 + 14.0567264067666 NA promoter-TSS (NM_028608) promoter-TSS (NM_028608) -412 NM_028608 73690 Mm.173790 NM_028608 ENSMUSG00000056888 Glipr1 2410114O14Rik|RTVP-1|RTVP1|mRTVP-1 GLI pathogenesis-related 1 (glioma) protein-coding common_peak1_98_461_0.669705422398106_9.18660175261511_14.0537347770357 chr5 142894581 142895967 + 14.0537347770357 NA promoter-TSS (NM_001033312) promoter-TSS (NM_001033312) -36 NM_001033312 231863 Mm.89753 NM_001033312 ENSMUSG00000066640 Fbxl18 AI427077|B130019G13Rik|C330021B20Rik F-box and leucine-rich repeat protein 18 protein-coding common_peak1_33_389_-0.977181741589083_8.11873944295507_14.0451746055545 chr7 105735989 105736600 + 14.0451746055545 NA promoter-TSS (NM_010562) promoter-TSS (NM_010562) 290 NM_025897 101867 Mm.231400 NM_025897 ENSMUSG00000030888 Rrp8 1500003O22Rik|2900001K19Rik|AW538116 ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding unique_peak1_27_46_1.73197589834029_6.42057680084778_14.0424100922186 chr4 149518240 149518828 + 14.0424100922186 NA intron (NM_023465, intron 1 of 4) CpG 293 NM_023465 67087 Mm.299735 NM_023465 ENSMUSG00000028988 Ctnnbip1 1110008O09Rik|2310001I19Rik|AW457332|Catnbip1|Icat catenin beta interacting protein 1 protein-coding common_peak1_20_261_-1.25594835773895_7.40544882266797_14.0418057025152 chr15 79950077 79950579 + 14.0418057025152 NA Intergenic Intergenic -17682 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak1_80_877_-0.61173504654248_9.47220960626412_14.040710817683 chr6 83114913 83116065 + 14.040710817683 NA promoter-TSS (NM_020619) promoter-TSS (NM_020619) -17 NM_020619 57377 Mm.28188 NM_020619 ENSMUSG00000030036 Mogs 1810017N02Rik|AI181835|Gcs1 mannosyl-oligosaccharide glucosidase protein-coding common_peak2_123_650_0.573393093941384_9.63321028013633_14.0393666239849 chr1 33813098 33814778 + 14.0393666239849 NA intron (NM_001290699, intron 1 of 12) intron (NM_001290699, intron 1 of 12) 657 NM_133817 98403 Mm.289103 NM_133817 ENSMUSG00000042197 Zfp451 4930515K21Rik|4933435G09Rik|AI596398|COASTER|Kiaa0576-hp|Znf451|mKIAA1702 zinc finger protein 451 protein-coding common_peak2_115_588_0.599764113054821_9.50200588035787_14.0386324243516 chr8 46830061 46833401 + 14.0386324243516 NA intron (NM_008391, intron 6 of 8) intron (NM_008391, intron 6 of 8) 91986 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak2_426_3699_0.254746004908768_11.9806825578581_14.0386144568933 chr3 19308585 19312906 + 14.0386144568933 NA intron (NM_001122759, intron 1 of 12) CpG 577 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak2_64_707_-0.6906910297501_9.12226003520795_14.0372831617341 chr3 121368917 121371113 + 14.0372831617341 NA Intergenic LTRIS4|LTR|ERV1 -56526 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding common_peak1_150_1660_-0.429315972976825_10.483178371474_14.0366884969745 chr14 50924185 50925601 + 14.0366884969745 NA promoter-TSS (NM_133676) promoter-TSS (NM_133676) 0 NM_133676 66246 Mm.274791 NM_133676 ENSMUSG00000006289 Osgep 1500019L24Rik|GCPL-1|PRSMG1 O-sialoglycoprotein endopeptidase protein-coding common_peak2_110_550_0.618009658793538_9.41491333796793_14.0336663665791 chr1 136345140 136346521 + 14.0336663665791 NA 5' UTR (NM_001081360, exon 1 of 19) 5' UTR (NM_001081360, exon 1 of 19) 274 NM_001081360 67886 Mm.144143 NM_001081360 ENSMUSG00000041570 Camsap2 1600013L13Rik|4930541M15Rik|Camsap1l1|mKIAA1078 calmodulin regulated spectrin-associated protein family, member 2 protein-coding common_peak1_55_181_1.00538242100559_8.01048585070149_14.0329422893468 chr6 90715870 90716725 + 14.0329422893468 NA 5' UTR (NM_001134383, exon 1 of 14) 5' UTR (NM_001134383, exon 1 of 14) 232 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak2_119_619_0.585756649696178_9.56900273012233_14.0320558479659 chr6 65671441 65673302 + 14.0320558479659 NA intron (NM_172399, intron 1 of 3) CpG 760 NM_172399 68169 Mm.52392 NM_172399 ENSMUSG00000049001 Ndnf A930038C07Rik|epidermacan neuron-derived neurotrophic factor protein-coding common_peak1_24_300_-1.14760448462332_7.65981743444804_14.0316667383045-2 chr8 70694857 70695358 + 14.0316667383045 NA Intergenic Intergenic -2632 NM_010592 16478 Mm.419851 NM_010592 ENSMUSG00000071076 Jund Jund1 jun D proto-oncogene protein-coding common_peak1_24_300_-1.14760448462332_7.65981743444804_14.0316667383045 chr10 88403626 88404320 + 14.0316667383045 NA intron (NM_001004164, intron 2 of 20) Charlie1a|DNA|hAT-Charlie 24561 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak1_403_4879_-0.242592616472079_12.1313691242142_14.0278592767643 chr11 84868550 84871831 + 14.0278592767643 NA promoter-TSS (NR_131197) promoter-TSS (NR_131197) 185 NR_131201 102635561 Mm.341797 NR_131197 Ggnbp2os - gametogenetin binding protein 2, opposite strand ncRNA common_peak2_274_2034_0.338583526110627_11.1601048422089_14.0259155161535 chr6 34861879 34864545 + 14.0259155161535 NA promoter-TSS (NM_197986) promoter-TSS (NM_197986) 66 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak1_253_2909_-0.317980432435247_11.347813221578_14.0219762661851 chr9 32499098 32502506 + 14.0219762661851 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 40650 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_21_270_-1.22235129865992_7.47097339202391_14.0212517919124 chrX 134600475 134600940 + 14.0212517919124 NA promoter-TSS (NM_001313716) promoter-TSS (NM_001313716) 298 NM_013463 11605 Mm.1114 NM_013463 ENSMUSG00000031266 Gla Ags galactosidase, alpha protein-coding unique_peak1_25_39_1.83349314975357_6.23867466976415_14.0200696247623-2 chr7 138919377 138920069 + 14.0200696247623 NA Intergenic Intergenic -10217 NM_009760 12176 Mm.378890 NM_009760 ENSMUSG00000078566 Bnip3 Nip3 BCL2/adenovirus E1B interacting protein 3 protein-coding unique_peak1_25_39_1.83349314975357_6.23867466976415_14.0200696247623 chr11 5181601 5182286 + 14.0200696247623 NA Intergenic Intergenic -29721 NM_080595 140703 Mm.840 NM_080595 ENSMUSG00000034164 Emid1 AW122071|CO-5|Emu1 EMI domain containing 1 protein-coding unique_peak2_8_143_-1.891851950756_6.22399902606431_14.0200696247623 chr5 115716601 115717840 + 14.0200696247623 NA intron (NM_001080808, intron 2 of 8) intron (NM_001080808, intron 2 of 8) 14339 NM_001080808 75665 Mm.233914 NM_001080808 ENSMUSG00000041609 Ccdc64 2210403N09Rik|BICDR-1|Bicdl1 coiled-coil domain containing 64 protein-coding common_peak1_61_675_-0.707584920361521_9.04708697610142_14.0175221046945 chr7 66147471 66148817 + 14.0175221046945 NA intron (NM_001081163, intron 2 of 2) intron (NM_001081163, intron 2 of 2) 38629 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_138_770_0.531397730877567_9.85628591535382_14.017090109903 chr13 73327745 73329559 + 14.017090109903 NA promoter-TSS (NM_010888) promoter-TSS (NM_010888) -170 NM_010888 407785 Mm.29897 NM_010888 ENSMUSG00000021606 Ndufs6 BC059730|IP13 NADH dehydrogenase (ubiquinone) Fe-S protein 6 protein-coding common_peak2_110_1205_-0.512096024535388_9.97996617963239_14.0167003456033 chr5 135777664 135779607 + 14.0167003456033 NA promoter-TSS (NM_029659) promoter-TSS (NM_029659) -14 NM_008617 17448 Mm.297096 NM_008617 ENSMUSG00000019179 Mdh2 MDH|Mdh-2|Mor-1|Mor1 malate dehydrogenase 2, NAD (mitochondrial) protein-coding common_peak1_95_440_0.682365244907286_9.12581746801116_14.0129016210695 chr19 16132638 16133980 + 14.0129016210695 NA 5' UTR (NM_008139, exon 1 of 7) 5' UTR (NM_008139, exon 1 of 7) 478 NM_008139 14682 Mm.439701 NM_008139 ENSMUSG00000024639 Gnaq 1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI guanine nucleotide binding protein, alpha q polypeptide protein-coding common_peak2_214_1444_0.39697897974423_10.6953432672602_14.0127973610751 chr1 127636213 127640648 + 14.0127973610751 NA intron (NM_028135, intron 2 of 7) intron (NM_028135, intron 2 of 7) 39591 NM_028135 72160 Mm.281287 NM_028135 ENSMUSG00000026347 Tmem163 2610024A01Rik|SV31 transmembrane protein 163 protein-coding common_peak2_96_1050_-0.552208590598768_9.76144265866279_14.0100479927144 chr10 127074768 127076736 + 14.0100479927144 NA Intergenic Intergenic -3155 NM_001301014 216439 Mm.336761 NM_001033263 ENSMUSG00000025422 Agap2 AGAP-2|Centg1|PIKE|cnt-g1|mKIAA0167 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 protein-coding unique_peak2_2_81_-3.02361347008506_4.84574526957556_14.0092794290374 chr12 115359174 115359717 + 14.0092794290374 NA Intergenic Intergenic 336349 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA common_peak1_55_612_-0.7465662024865_8.88646016244753_14.0091128858292 chr9 66511731 66512625 + 14.0091128858292 NA intron (NM_175206, intron 1 of 1) intron (NM_175206, intron 1 of 1) 2415 NM_175206 74165 Mm.297998 NM_175206 ENSMUSG00000050503 Fbxl22 1110004B15Rik F-box and leucine-rich repeat protein 22 protein-coding common_peak1_19_250_-1.28040932632_7.33133889079077_14.00738377579 chr2 32723216 32723694 + 14.00738377579 NA intron (NR_045535, intron 1 of 12) B1_Mur2|SINE|Alu 2400 NM_013781 27387 Mm.9593 NM_013781 ENSMUSG00000059013 Sh2d3c Chat|Nsp3|Shep1 SH2 domain containing 3C protein-coding unique_peak1_17_14_2.59779476626415_5.20578797874059_14.0028623387533 chr11 87358488 87358924 + 14.0028623387533 NA exon (NM_177167, exon 1 of 7) exon (NM_177167, exon 1 of 7) 288 NM_177167 320472 Mm.341988 NM_177167 ENSMUSG00000046442 Ppm1e AW049266|B930008A12Rik|POPX1|PP2CH|mKIAA1072 protein phosphatase 1E (PP2C domain containing) protein-coding common_peak1_31_369_-1.00851588620479_8.02712351741392_14.0028285327953 chr3 79176723 79177387 + 14.0028285327953 NA Intergenic Intergenic -31180 NM_001099624 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak2_95_1039_-0.555367722563647_9.74468395174663_14.0018277717233 chr11 115076289 115079542 + 14.0018277717233 NA Intergenic MLT1J|LTR|ERVL-MaLR -13516 NM_001163753 58222 Mm.143789 NM_021411 ENSMUSG00000020732 Rab37 B230331O03Rik|B230354I04Rik RAB37, member RAS oncogene family protein-coding common_peak1_129_1419_-0.468148382872792_10.2376010229556_14.0017808134687 chr1 125440881 125442344 + 14.0017808134687 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -5885 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak2_129_1419_-0.468148382872792_10.2376010229556_14.0017808134687 chr1 53849830 53852997 + 14.0017808134687 NA intron (NM_001001883, intron 21 of 28) intron (NM_001001883, intron 21 of 28) 1989 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA unique_peak1_29_54_1.62729671907304_6.59500807306118_14.0017725822902 chr6 56568445 56569119 + 14.0017725822902 NA Intergenic CpG 135917 NM_025520 66373 Mm.25642 NM_025520 ENSMUSG00000091625 Lsm5 2010208O10Rik|2310034K10Rik LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_74_812_-0.63696183378536_9.34863062518235_13.9944635182045 chr3 14886627 14887436 + 13.9944635182045 NA intron (NM_009801, intron 1 of 6) intron (NM_009801, intron 1 of 6) 605 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding common_peak1_187_1194_0.43356080693062_10.4395753063334_13.9936555450591 chr9 73070460 73073645 + 13.9936555450591 NA intron (NM_001301232, intron 1 of 5) B1_Mur4|SINE|Alu 7904 NM_001301232 11891 Mm.34867 NM_023635 ENSMUSG00000032202 Rab27a 2210402C08Rik|2410003M20Rik|4933437C11Rik|ash RAB27A, member RAS oncogene family protein-coding common_peak2_30_359_-1.02517089159537_7.97926765053199_13.9909555818895 chr8 114439014 114440487 + 13.9909555818895 NA promoter-TSS (NM_019573) promoter-TSS (NM_019573) 98 NM_019573 80707 Mm.440420 NM_019573 ENSMUSG00000004637 Wwox 5330426P09Rik|9030416C10Rik|WOX1 WW domain-containing oxidoreductase protein-coding common_peak1_48_143_1.10695123546837_7.7234006191765_13.990310965763 chr3 14869292 14870186 + 13.990310965763 NA intron (NM_007606, intron 5 of 6) intron (NM_007606, intron 5 of 6) 6201 NM_007606 12350 Mm.300 NM_007606 ENSMUSG00000027559 Car3 BB219044|Ca3|Car-3 carbonic anhydrase 3 protein-coding common_peak1_35_408_-0.944659359882726_8.20362735300039_13.9893288759811 chr3 88451643 88452285 + 13.9893288759811 NA intron (NM_001163489, intron 4 of 14) intron (NM_001163489, intron 4 of 14) 3797 NM_013658 20351 Mm.439752 NM_013658 ENSMUSG00000028064 Sema4a AI132332|SemB|Semab sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A protein-coding common_peak2_63_228_0.910274097400936_8.29434083679741_13.9867101599065 chr5 110269201 110270369 + 13.9867101599065 NA exon (NM_028273, exon 1 of 6) exon (NM_028273, exon 1 of 6) 114 NM_001163538 72542 Mm.61682 NM_028273 ENSMUSG00000029500 Pgam5 2610528A17Rik phosphoglycerate mutase family member 5 protein-coding common_peak2_63_228_0.910274097400936_8.29434083679741_13.9867101599065-2 chr9 120049215 120050752 + 13.9867101599065 NA 3' UTR (NM_009987, exon 2 of 2) 3' UTR (NM_009987, exon 2 of 2) 18313 NM_009987 13051 Mm.44065 NM_009987 ENSMUSG00000052336 Cx3cr1 - chemokine (C-X3-C motif) receptor 1 protein-coding common_peak1_128_1407_-0.469569932230064_10.2246466525223_13.9858837402148 chr16 32163801 32165745 + 13.9858837402148 NA intron (NM_146069, intron 1 of 3) intron (NM_146069, intron 1 of 3) 703 NM_146069 224109 Mm.33498 NM_146069 ENSMUSG00000052384 Nrros E430025L02Rik|Lrcc33|Lrrc33 negative regulator of reactive oxygen species protein-coding common_peak1_67_738_-0.672669670799268_9.19309571874652_13.9838526512403-2 chr14 79451835 79452705 + 13.9838526512403 NA exon (NM_001034882, exon 1 of 1) exon (NM_001034882, exon 1 of 1) 435 NM_001034882 432879 Mm.308666 NM_001034882 ENSMUSG00000075502 Kbtbd6 EG432879|Gm5465|Zbtbd6 kelch repeat and BTB (POZ) domain containing 6 protein-coding common_peak1_67_738_-0.672669670799268_9.19309571874652_13.9838526512403 chr11 50108398 50109747 + 13.9838526512403 NA intron (NM_001290750, intron 7 of 7) intron (NM_001290750, intron 7 of 7) -22288 NM_001290759 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding common_peak2_208_2351_-0.355926728311621_11.0217089806806_13.9773553097337 chr2 120025286 120028984 + 13.9773553097337 NA promoter-TSS (NM_001114637) promoter-TSS (NM_001114637) -348 NR_104353 102238433 Mm.41467 NR_104353 ENSMUSG00000033852 Gm28042 Jmjd7-pla2g4b predicted gene, 28042 ncRNA common_peak2_78_323_0.782249088228692_8.73097454699897_13.9764331125324 chr9 70847081 70848590 + 13.9764331125324 NA intron (NM_008280, intron 1 of 8) intron (NM_008280, intron 1 of 8) 86973 NM_008280 15450 Mm.390187 NM_008280 ENSMUSG00000032207 Lipc AI256194|HL|Hpl lipase, hepatic protein-coding common_peak1_162_1800_-0.410738021984907_10.6092134549138_13.9759284162188 chr11 120573121 120574444 + 13.9759284162188 NA promoter-TSS (NM_011032) promoter-TSS (NM_011032) -846 NM_011032 18453 Mm.16660 NM_011032 ENSMUSG00000025130 P4hb ERp59|PDI|Pdia1|Thbp prolyl 4-hydroxylase, beta polypeptide protein-coding common_peak1_39_449_-0.896034652399905_8.36576386501708_13.9753519416601 chr11 70437880 70438771 + 13.9753519416601 NA promoter-TSS (NR_106064) promoter-TSS (NR_106064) 70 NR_106064 102465670 NR_106064 ENSMUSG00000099109 Mir7115 Gm27902|mmu-mir-7115 microRNA 7115 ncRNA common_peak1_39_449_-0.896034652399905_8.36576386501708_13.9753519416601-2 chrX 37109710 37110301 + 13.9753519416601 NA intron (NM_026573, intron 1 of 9) intron (NM_026573, intron 1 of 9) 317 NM_026573 68134 Mm.271160 NM_026573 ENSMUSG00000036572 Upf3b 5730594O13Rik|AI317193|AW541158|RENT3B|UPF3X UPF3 regulator of nonsense transcripts homolog B (yeast) protein-coding common_peak1_14_202_-1.48329179577383_6.92369001929826_13.9713334169479 chr3 21991973 21992360 + 13.9713334169479 NA Intergenic Intergenic -84486 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_89_973_-0.574987013331354_9.64028445541667_13.9709252978694 chr18 67873082 67876009 + 13.9709252978694 NA intron (NM_027556, intron 41 of 45) ORR1D1|LTR|ERVL-MaLR -58712 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_247_1764_0.361066670134832_10.965985803226_13.9660458128308 chr10 61265737 61268998 + 13.9660458128308 NA intron (NM_001081127, intron 2 of 21) B4A|SINE|B4 6071 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding unique_peak2_13_192_-1.53250459843651_6.82620473804983_13.9640076676279 chrX 123612197 123612794 + 13.9640076676279 NA Intergenic Intergenic 508972 NM_028426 73061 Mm.292979 NM_028426 ENSMUSG00000079450 Cldn34c1 3110007F17Rik claudin 34C1 protein-coding common_peak1_147_845_0.508494420464174_9.97876106335204_13.960187549652 chr3 52069449 52070666 + 13.960187549652 NA intron (NM_001004176, intron 1 of 4) AmnSINE1|SINE|Deu 34949 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like 3 (Drosophila) protein-coding common_peak2_142_804_0.519345373580448_9.9125176597922_13.9598860168237 chr14 40965595 40967045 + 13.9598860168237 NA intron (NM_145928, intron 1 of 8) CpG 576 NM_145928 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding common_peak2_168_1025_0.464998832922356_10.2353144320682_13.959828629562 chr11 25099873 25100423 + 13.959828629562 NA Intergenic (CATTC)n|Simple_repeat|Simple_repeat -225959 NR_045853 71234 Mm.158627 NR_045853 ENSMUSG00000033015 4933427E13Rik - RIKEN cDNA 4933427E13 gene ncRNA common_peak1_392_3310_0.268170482603157_11.8271365366986_13.9598147336123 chr8 86882842 86885558 + 13.9598147336123 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 1058 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_426_3701_0.253966380441868_11.9810723700915_13.9585008396584 chr18 3336293 3339016 + 13.9585008396584 NA promoter-TSS (NM_001110852) promoter-TSS (NM_001110852) -65 NM_001110852 12916 Mm.5244 NM_013498 ENSMUSG00000063889 Crem ICER|ICERI cAMP responsive element modulator protein-coding common_peak1_139_779_0.527340023146635_9.87100032532293_13.9581109868879 chr14 40965795 40966965 + 13.9581109868879 NA intron (NM_145928, intron 1 of 8) CpG 516 NM_145928 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding common_peak2_139_779_0.527340023146635_9.87100032532293_13.9581109868879 chr4 123916508 123918258 + 13.9581109868879 NA promoter-TSS (NM_017475) promoter-TSS (NM_017475) -50 NM_017475 54170 Mm.220922 NM_017475 ENSMUSG00000028646 Rragc AU041672|Gtr2|RAGC|TIB929|YGR163W Ras-related GTP binding C protein-coding common_peak2_335_3965_-0.269545073684926_11.8186964253864_13.9579490062848 chr7 102265507 102269151 + 13.9579490062848 NA promoter-TSS (NM_009287) promoter-TSS (NM_009287) -495 NM_009287 20866 Mm.645 NM_009287 ENSMUSG00000030987 Stim1 SIM stromal interaction molecule 1 protein-coding common_peak1_46_133_1.13704189696825_7.63461013894189_13.9536979643908 chr8 22411138 22411914 + 13.9536979643908 NA exon (NM_020560, exon 1 of 7) exon (NM_020560, exon 1 of 7) 186 NM_020560 57312 Mm.289402 NM_020560 ENSMUSG00000031533 Mrps31 1500002D03Rik|AA960481|Imogen38|Imogen44 mitochondrial ribosomal protein S31 protein-coding common_peak2_180_2013_-0.386640652530422_10.7825276417416_13.9532966915664 chr16 55837290 55840068 + 13.9532966915664 NA promoter-TSS (NM_001159395) promoter-TSS (NM_001159395) -38 NM_001159395 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak2_341_2743_0.293180780717_11.5686551565313_13.9530369343957 chr5 137530256 137535917 + 13.9530369343957 NA intron (NM_010312, intron 1 of 9) intron (NM_010312, intron 1 of 9) 143 NM_010312 14693 Mm.30141 NM_010312 ENSMUSG00000029713 Gnb2 Gnb-2 guanine nucleotide binding protein (G protein), beta 2 protein-coding common_peak2_279_2087_0.333376651512719_11.1945943223262_13.9519074105118 chr18 80682050 80687329 + 13.9519074105118 NA intron (NM_198429, intron 2 of 9) intron (NM_198429, intron 2 of 9) 23484 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_54_601_-0.752328658373786_8.85745534757281_13.9457189702118 chr12 84450201 84452347 + 13.9457189702118 NA promoter-TSS (NM_134042) promoter-TSS (NM_134042) -234 NM_173756 217708 Mm.311904 NM_173756 ENSMUSG00000085793 Lin52 5830457H20Rik lin-52 homolog (C. elegans) protein-coding common_peak2_97_1060_-0.547720392817725_9.7773487445059_13.9445282296447 chr3 60514915 60518032 + 13.9445282296447 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 15294 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_362_2974_0.282027407706064_11.6796876569357_13.9442200763344 chr9 45953682 45956425 + 13.9442200763344 NA 5' UTR (NM_001289668, exon 1 of 27) 5' UTR (NM_001289668, exon 1 of 27) 196 NM_172257 214597 Mm.379345 NM_172257 ENSMUSG00000034908 Sidt2 B930096O19|BC023957|CGI-40 SID1 transmembrane family, member 2 protein-coding common_peak2_533_4985_0.220098028612327_12.3937161817977_13.941629455698 chr2 11214447 11221256 + 13.941629455698 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 45469 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak2_212_1426_0.398524442524538_10.678031840738_13.9381108926937 chr7 90058772 90061346 + 13.9381108926937 NA Intergenic Intergenic 30900 NR_110364 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15 RIKEN cDNA E230029C05 gene ncRNA unique_peak2_5_113_-2.27233916844536_5.69672042994206_13.9343556159066 chr3 53168489 53169342 + 13.9343556159066 NA intron (NM_175386, intron 2 of 3) intron (NM_175386, intron 2 of 3) 127368 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968 lipoma HMGIC fusion partner protein-coding common_peak2_49_550_-0.793281005248417_8.70926800594695_13.9312481556882 chr9 32515864 32517792 + 13.9312481556882 NA intron (NM_008026, intron 1 of 8) UCON26|Unknown|Unknown 24624 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_34_75_1.43351820107995_6.96468661398356_13.9243162765645 chr8 107290433 107291035 + 13.9243162765645 NA intron (NR_039557, intron 2 of 3).3 RSINE1|SINE|B4 -2736 NM_018823 54446 Mm.390057 NM_018823 ENSMUSG00000003847 Nfat5 AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz nuclear factor of activated T cells 5 protein-coding common_peak2_34_75_1.43351820107995_6.96468661398356_13.9243162765645 chr5 86792787 86793522 + 13.9243162765645 NA Intergenic MTC-int|LTR|ERVL-MaLR -11336 NM_177680 231386 Mm.196325 NM_177680 ENSMUSG00000035851 Ythdc1 A730098D12Rik|C80342|mKIAA1966 YTH domain containing 1 protein-coding common_peak2_218_1483_0.391178165918111_10.7308644595799_13.9178643677221 chr2 164803758 164806070 + 13.9178643677221 NA promoter-TSS (NM_178375) promoter-TSS (NM_178375) -33 NM_133240 170789 Mm.277878 NM_133240 ENSMUSG00000017307 Acot8 PTE-2|Pte1 acyl-CoA thioesterase 8 protein-coding common_peak1_54_176_1.01368546830292_7.97444828423446_13.9171979607463 chr11 118362467 118363355 + 13.9171979607463 NA Intergenic C-rich|Low_complexity|Low_complexity -7500 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding common_peak1_444_3912_0.247064560741713_12.0575916752717_13.9166284977221 chr11 67563363 67567764 + 13.9166284977221 NA intron (NM_008088, intron 1 of 13) intron (NM_008088, intron 1 of 13) -20937 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_18_240_-1.31252513283307_7.25662676981343_13.9044181753958 chr19 45783934 45784448 + 13.9044181753958 NA promoter-TSS (NM_023799) promoter-TSS (NM_023799) -900 NM_023799 76055 Mm.122725 NM_023799 ENSMUSG00000025220 Mgea5 2810009A20Rik|4833427O07Rik|5830447M11Rik|AA408215|Hy5|Ncoat|OGA|mKIAA0679 meningioma expressed antigen 5 (hyaluronidase) protein-coding common_peak1_241_1706_0.365931812794067_10.9202132494248_13.9041852967045 chr14 37134404 37136154 + 13.9041852967045 NA promoter-TSS (NM_078478) promoter-TSS (NM_078478) 43 NM_078478 66092 Mm.182912 NM_078478 ENSMUSG00000041028 Ghitm 1010001P14Rik|C77840|MICS1|PTD010|Tmbim5 growth hormone inducible transmembrane protein protein-coding common_peak1_41_108_1.23590263020793_7.38613563988089_13.9026611751371 chr13 73770833 73771603 + 13.9026611751371 NA intron (NM_011390, intron 1 of 23) intron (NM_011390, intron 1 of 23) 7521 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak1_526_4900_0.221554015918977_12.3696374393692_13.902223499008 chr12 51828052 51830756 + 13.902223499008 NA 5' UTR (NM_144788, exon 1 of 43) 5' UTR (NM_144788, exon 1 of 43) 132 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak2_314_2454_0.308207437628045_11.4156110280161_13.8994156011854 chr4 155490503 155493133 + 13.8994156011854 NA intron (NM_001160017, intron 1 of 10) CpG 457 NM_001160016 14688 Mm.2344 NM_008142 ENSMUSG00000029064 Gnb1 AA409223|C77571|Gnb-1 guanine nucleotide binding protein (G protein), beta 1 protein-coding common_peak1_23_32_1.96938134873364_6.02908479372527_13.8987651912772 chr7 67532695 67533179 + 13.8987651912772 NA intron (NM_175124, intron 7 of 9) MTD|LTR|ERVL-MaLR 112299 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak1_597_5790_0.204481248864946_12.6018374059222_13.8972143124333 chr10 75301093 75306137 + 13.8972143124333 NA intron (NM_153406, intron 13 of 15) intron (NM_153406, intron 13 of 15) -13262 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak2_188_1204_0.430926244987742_10.4502805536112_13.8960947401219 chr2 156728935 156731534 + 13.8960947401219 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 8955 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 discs, large homolog-associated protein 4 (Drosophila) protein-coding common_peak1_42_478_-0.858154675482229_8.47480450799507_13.8955603355283 chr19 46056544 46057394 + 13.8955603355283 NA intron (NM_001081214, intron 1 of 13) CpG 430 NM_001081214 226169 Mm.2415 NM_145504 ENSMUSG00000055491 Pprc1 A930018M19|BC013720|PRC|mKIAA0595 peroxisome proliferative activated receptor, gamma, coactivator-related 1 protein-coding common_peak1_24_299_-1.1428034983595_7.65741694131613_13.8932281815827 chr4 108455490 108456052 + 13.8932281815827 NA Intergenic Intergenic -3655 NM_175472 230594 Mm.25181 NM_175472 ENSMUSG00000034610 Zcchc11 6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191 zinc finger, CCHC domain containing 11 protein-coding common_peak2_73_291_0.816571403517749_8.59811026063889_13.8923957675054 chr6 15792537 15794195 + 13.8923957675054 NA intron (NM_175088, intron 4 of 4) intron (NM_175088, intron 4 of 4) 72705 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding common_peak2_552_5222_0.214972212006531_12.4581490943755_13.8920367384491 chr18 35917617 35921241 + 13.8920367384491 NA Intergenic Intergenic -45401 NM_028707 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding common_peak2_154_1705_-0.421614139705664_10.5255948614655_13.8892828473184 chr5 122500813 122502483 + 13.8892828473184 NA exon (NM_001110140, exon 1 of 20) exon (NM_001110140, exon 1 of 20) 577 NM_001110140 11938 Mm.227583 NM_009722 ENSMUSG00000029467 Atp2a2 9530097L16Rik|D5Wsu150e|SERCA2|SERCA2B|Serca2a|mKIAA4195 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 protein-coding common_peak1_81_885_-0.603107312303235_9.4896092324034_13.8887760309533 chr4 10874103 10875213 + 13.8887760309533 NA exon (NM_026005, exon 1 of 6) exon (NM_026005, exon 1 of 6) 160 NM_026005 67157 Mm.440552 NM_026005 ENSMUSG00000059482 2610301B20Rik AI428449 RIKEN cDNA 2610301B20 gene protein-coding common_peak1_26_318_-1.09520504692527_7.76981009030223_13.887632894847-2 chr5 113986525 113987011 + 13.887632894847 NA intron (NM_198109, intron 2 of 14) intron (NM_198109, intron 2 of 14) 6989 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot homolog 1 (Drosophila) protein-coding common_peak1_26_318_-1.09520504692527_7.76981009030223_13.887632894847 chr2 179976252 179976740 + 13.887632894847 NA promoter-TSS (NR_033782) promoter-TSS (NR_033782) 150 NM_001081092 228980 Mm.235542 NM_001081092 ENSMUSG00000039117 Taf4 135kDa|AI450312|TAFII130|TAFII135|Taf2c1|Taf4a TATA-box binding protein associated factor 4 protein-coding unique_peak1_22_29_2.03157020848499_5.92267569985101_13.8852346150993-2 chr5 150259660 150260258 + 13.8852346150993 NA promoter-TSS (NM_172887) promoter-TSS (NM_172887) 29 NM_172887 320365 Mm.216590 NM_172887 ENSMUSG00000056602 Fry 13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143 FRY microtubule binding protein protein-coding unique_peak1_22_29_2.03157020848499_5.92267569985101_13.8852346150993-3 chr9 65539319 65539818 + 13.8852346150993 NA Intergenic Intergenic 40519 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding unique_peak1_22_29_2.03157020848499_5.92267569985101_13.8852346150993 chr13 119706146 119706669 + 13.8852346150993 NA exon (NM_001291439, exon 10 of 10) exon (NM_001291439, exon 10 of 10) 16056 NM_001291439 208715 Mm.61526 NM_145942 ENSMUSG00000093930 Hmgcs1 B130032C06Rik 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 protein-coding common_peak2_182_1150_0.439981849068026_10.3886630426662_13.8836741671079 chr4 133966797 133968531 + 13.8836741671079 NA intron (NM_016957, intron 1 of 5) CpG 327 NM_016957 15331 Mm.319660 NM_016957 ENSMUSG00000003038 Hmgn2 HMG-17|Hmg17 high mobility group nucleosomal binding domain 2 protein-coding common_peak2_56_621_-0.73627205058043_8.91263474484039_13.880057569029 chr18 12120760 12122128 + 13.880057569029 NA promoter-TSS (NM_178801) promoter-TSS (NM_178801) 93 NR_110356 338363 Mm.271567 NM_178801 ENSMUSG00000049411 Tmem241 6030446N20Rik transmembrane protein 241 protein-coding common_peak1_56_621_-0.73627205058043_8.91263474484039_13.880057569029 chr15 31531092 31531828 + 13.880057569029 NA promoter-TSS (NM_172606) promoter-TSS (NM_172606) -423 NM_172606 223455 Mm.272185 NM_172606 ENSMUSG00000039100 March6 3830408G03|F830029L24Rik|mKIAA0597 membrane-associated ring finger (C3HC4) 6 protein-coding common_peak1_179_1999_-0.386381024724743_10.7725937722997_13.8758469345652 chr11 23305692 23307472 + 13.8758469345652 NA promoter-TSS (NM_001190401) promoter-TSS (NM_001190401) -313 NM_001190401 17847 Mm.119155 NM_001190401 ENSMUSG00000056342 Usp34 A530081C03Rik|Murr2 ubiquitin specific peptidase 34 protein-coding common_peak2_93_427_0.688276412211229_9.08560519250676_13.874716026587 chr15 64205217 64207119 + 13.874716026587 NA intron (NM_001276462, intron 2 of 27) intron (NM_001276462, intron 2 of 27) 106505 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_127_683_0.558237681798339_9.69697135578507_13.873209332664 chr8 57486723 57488772 + 13.873209332664 NA promoter-TSS (NR_126555) promoter-TSS (NR_126555) 113 NM_021788 60406 Mm.118 NM_021788 ENSMUSG00000031609 Sap30 30kDa sin3 associated polypeptide protein-coding common_peak2_120_628_0.57965063775616_9.58674152575737_13.8722823571407 chr11 78327810 78329227 + 13.8722823571407 NA promoter-TSS (NM_201406) promoter-TSS (NM_201406) 96 NM_201406 276846 Mm.295908 NM_201406 ENSMUSG00000041958 Pigs BC058979|Gm393|Gm689 phosphatidylinositol glycan anchor biosynthesis, class S protein-coding common_peak1_59_653_-0.717878081714023_8.99420778464107_13.8708709507764 chr13 93894370 93895246 + 13.8708709507764 NA intron (NM_009712, intron 6 of 7) intron (NM_009712, intron 6 of 7) 104031 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak1_638_6318_0.195948027682507_12.7234545643123_13.8695438420366 chr18 80493144 80498282 + 13.8695438420366 NA Intergenic Intergenic -26046 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding common_peak2_100_477_0.65598138562471_9.2288575007931_13.8645214731639 chr9 110684165 110686550 + 13.8645214731639 NA intron (NM_028312, intron 1 of 6) MIR|SINE|MIR 28854 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_30_358_-1.02115782908874_7.97726111927868_13.8641959790834 chr13 23550667 23552045 + 13.8641959790834 NA TTS (NM_175655) TTS (NM_175655) 287 NM_175655 319157 Mm.442307 NM_175655 ENSMUSG00000069274 Hist1h4f - histone cluster 1, H4f protein-coding common_peak2_74_298_0.806148034091562_8.62707569124388_13.8637544130403 chr3 27938115 27939477 + 13.8637544130403 NA intron (NM_001164056, intron 1 of 26) CpG 116 NM_001164056 18805 Mm.212039 NM_008875 ENSMUSG00000027695 Pld1 AA536939|C85393|Pld1a|Pld1b|mPLD1 phospholipase D1 protein-coding common_peak1_46_519_-0.819236725602437_8.61274945022724_13.8605343232427 chr17 47943276 47943992 + 13.8605343232427 NA Intergenic Intergenic -19002 NM_001110825 74123 Mm.240062 NM_028767 ENSMUSG00000023991 Foxp4 1200010K03Rik|2310007G05Rik|mFKHLA forkhead box P4 protein-coding common_peak1_46_519_-0.819236725602437_8.61274945022724_13.8605343232427-2 chr8 105810080 105810920 + 13.8605343232427 NA intron (NM_145824, intron 2 of 13) L2c|LINE|L2 16850 NM_145824 74334 Mm.4206 NM_145824 ENSMUSG00000037415 Ranbp10 4432417N03Rik RAN binding protein 10 protein-coding common_peak1_71_778_-0.64756953381629_9.28169475115352_13.8600405439678 chr9 72985544 72986390 + 13.8600405439678 NA promoter-TSS (NM_001198789) promoter-TSS (NM_001198789) 463 NM_028181 72278 Mm.268475 NM_028181 ENSMUSG00000034563 Ccpg1 1700030B06Rik|1810073J13Rik|9430028F23Rik|AI426686|AI875170|CPR8|D9Ertd392e cell cycle progression 1 protein-coding common_peak2_189_1214_0.428341502968424_10.4609113499774_13.8597181494728 chr4 121214044 121215739 + 13.8597181494728 NA Intergenic CpG -26357 NM_001081013 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding common_peak1_28_338_-1.05647814862378_7.87690238882446_13.8587813755211 chr7 81420482 81421226 + 13.8587813755211 NA intron (NM_001252525, intron 2 of 11) intron (NM_001252525, intron 2 of 11) 33904 NM_001252525 12877 Mm.273122 NM_007755 ENSMUSG00000025586 Cpeb1 AU024112|Cpeb|mCPEB cytoplasmic polyadenylation element binding protein 1 protein-coding common_peak1_392_4724_-0.24487683599564_12.083660195998_13.8573114866053 chr11 70787695 70790533 + 13.8573114866053 NA Intergenic ORR1E|LTR|ERVL-MaLR 23447 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak1_128_1405_-0.467519192665302_10.2236212827399_13.8565599843665 chr1 16656172 16657714 + 13.8565599843665 NA promoter-TSS (NR_037998) promoter-TSS (NR_037998) -78 NM_026456 67923 Mm.289248 NM_026456 ENSMUSG00000079658 Eloc 2610043E24Rik|2610301I15Rik|AA407206|AI987979|AW049146|Tceb1 elongin C protein-coding common_peak1_19_249_-1.27465005703131_7.32845925614643_13.8564424965543 chr11 4849669 4850066 + 13.8564424965543 NA promoter-TSS (NM_010898) promoter-TSS (NM_010898) -323 NM_010898 18016 Mm.297109 NM_010898 ENSMUSG00000009073 Nf2 merlin neurofibromin 2 protein-coding common_peak1_19_249_-1.27465005703131_7.32845925614643_13.8564424965543-2 chr12 104989411 104989924 + 13.8564424965543 NA intron (NM_172500, intron 1 of 16) MT2B|LTR|ERVL 9010 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_60_663_-0.710519980299953_9.01977944119695_13.8499674569814-2 chr19 53398077 53398875 + 13.8499674569814 NA Intergenic MLT1A1|LTR|ERVL-MaLR -7903 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak1_60_663_-0.710519980299953_9.01977944119695_13.8499674569814 chr10 127063491 127064710 + 13.8499674569814 NA intron (NM_009870, intron 1 of 7) intron (NM_009870, intron 1 of 7) 497 NM_009870 12567 Mm.6839 NM_009870 ENSMUSG00000006728 Cdk4 Crk3 cyclin-dependent kinase 4 protein-coding common_peak2_588_5677_0.206075256027061_12.5742047617379_13.8476978953475 chr11 51854765 51859978 + 13.8476978953475 NA 5' UTR (NM_199299, exon 1 of 12) 5' UTR (NM_199299, exon 1 of 12) 110 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak1_99_470_0.659656564896311_9.20941153206094_13.8462163062218 chr5 134236167 134237786 + 13.8462163062218 NA TTS (NM_010365) TTS (NM_010365) -7351 NR_104383 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak1_178_1987_-0.387557456139518_10.7633233134925_13.8449094660725 chr6 38550166 38551308 + 13.8449094660725 NA promoter-TSS (NM_138680) promoter-TSS (NM_138680) -597 NM_001311100 192196 Mm.276133 NM_138680 ENSMUSG00000029823 Luc7l2 4930471C18Rik|AA522013|AU015269|CGI59|Cgi74 LUC7-like 2 (S. cerevisiae) protein-coding common_peak1_78_324_0.7778031831975_8.73319749951457_13.8426078833262 chr7 80889296 80890390 + 13.8426078833262 NA TTS (NM_028026) TTS (NM_028026) 11426 NM_028026 71968 Mm.274226 NM_028026 ENSMUSG00000025722 Wdr73 1200011I23Rik|2410008B13Rik|AI848574|C85352 WD repeat domain 73 protein-coding unique_peak2_15_211_-1.43166719143803_7.01208685884418_13.8404476272793 chr11 51805371 51806067 + 13.8404476272793 NA Intergenic Intergenic 42056 NM_025535 66397 Mm.196592 NM_025535 ENSMUSG00000020386 Sar1b 2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb secretion associated Ras related GTPase 1B protein-coding common_peak1_115_590_0.59487361670775_9.50445112853141_13.8392262465944 chr17 6106277 6107544 + 13.8392262465944 NA promoter-TSS (NM_001103181) promoter-TSS (NM_001103181) 80 NM_001103181 68842 Mm.449307 NM_054040 ENSMUSG00000034377 Tulp4 1110057P05Rik|2210038L17Rik|Tusp tubby like protein 4 protein-coding common_peak2_37_89_1.33512341825357_7.15941480545646_13.8389706923026-2 chr15 64100130 64101079 + 13.8389706923026 NA intron (NM_001276462, intron 24 of 27) intron (NM_001276462, intron 24 of 27) -40156 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_37_89_1.33512341825357_7.15941480545646_13.8389706923026 chr1 86415257 86416049 + 13.8389706923026 NA Intergenic Intergenic -10676 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 1700019O17Rik - RIKEN cDNA 1700019O17 gene protein-coding common_peak1_87_385_0.720565327798584_8.95273970116737_13.8384793110176 chr10 58323527 58324437 + 13.8384793110176 NA intron (NM_026148, intron 1 of 9) Charlie1|DNA|hAT-Charlie 516 NM_026148 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak1_66_725_-0.673282037846027_9.16718471907274_13.8358965008906 chr15 96288353 96289658 + 13.8358965008906 NA intron (NM_175251, intron 2 of 20) intron (NM_175251, intron 2 of 20) 1483 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding common_peak1_47_528_-0.806736132835574_8.64375584569624_13.8339175955395 chr2 3716630 3717395 + 13.8339175955395 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 3554 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_81_344_0.757603024586251_8.80925406395866_13.8337940933373 chr4 43903331 43904633 + 13.8337940933373 NA intron (NM_016678, intron 6 of 20) intron (NM_016678, intron 6 of 20) 28452 NM_016678 53614 Mm.331573 NM_016678 ENSMUSG00000028476 Reck St15|mRECK reversion-inducing-cysteine-rich protein with kazal motifs protein-coding common_peak1_321_2530_0.303117432434654_11.457050508328_13.8337160038296 chr11 69058480 69060849 + 13.8337160038296 NA promoter-TSS (NM_028005) promoter-TSS (NM_028005) -111 NM_028005 71923 Mm.340257 NM_028005 ENSMUSG00000045176 Borcs6 2310047M10Rik BLOC-1 related complex subunit 6 protein-coding common_peak1_34_397_-0.955178906020116_8.15903516753359_13.8333723495568 chr14 27341678 27342311 + 13.8333723495568 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) 5957 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_163_1809_-0.407106094532429_10.6182209347044_13.8323010544772 chr8 104246201 104249068 + 13.8323010544772 NA intron (NR_045642, intron 2 of 8) intron (NR_045642, intron 2 of 8) 924 NR_045642 57813 Mm.183110 NM_021028 ENSMUSG00000035824 Tk2 AU024611|mt-TK thymidine kinase 2, mitochondrial protein-coding common_peak1_146_839_0.506765235397845_9.96762813536505_13.831171735945 chr11 50224536 50226743 + 13.831171735945 NA 5' UTR (NM_145926, exon 1 of 15) 5' UTR (NM_145926, exon 1 of 15) 304 NM_145926 103534 Mm.86759 NM_145926 ENSMUSG00000036620 Mgat4b AA407995|GnTIVb mannoside acetylglucosaminyltransferase 4, isoenzyme B protein-coding common_peak1_219_1494_0.388585871673161_10.740222704922_13.8305289640437 chr9 90248983 90252540 + 13.8305289640437 NA intron (NM_194334, intron 1 of 12) PB1D10|SINE|Alu 20008 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak2_123_1348_-0.47776780584125_10.1587907300276_13.8236243045854 chr17 83653351 83655823 + 13.8236243045854 NA Intergenic Intergenic -22692 NM_153512 225030 Mm.223506 NM_153512 ENSMUSG00000045053 Kcng3 KV6.3|Kv10.1a|Kv10.1b potassium voltage-gated channel, subfamily G, member 3 protein-coding common_peak1_123_1348_-0.47776780584125_10.1587907300276_13.8236243045854 chr11 117848219 117849190 + 13.8236243045854 NA promoter-TSS (NM_009689) promoter-TSS (NM_009689) -533 NM_001012273 11799 Mm.8552 NM_009689 ENSMUSG00000017716 Birc5 AAC-11|Api4|TIAP|survivin40 baculoviral IAP repeat-containing 5 protein-coding unique_peak2_55_610_-0.741851508614449_8.88410281551151_13.8138703451536 chr6 49010107 49012346 + 13.8138703451536 NA Intergenic Intergenic -11610 NR_126454 75347 Mm.207324 NR_126454 ENSMUSG00000107656 4930563H07Rik - RIKEN cDNA 4930563H07 gene ncRNA common_peak2_17_230_-1.34706367954339_7.17821720164436_13.8137121871039 chr8 104591371 104592161 + 13.8137121871039 NA intron (NM_001024606, intron 1 of 1) CpG 298 NM_001024606 382051 Mm.290750 NM_001024606 ENSMUSG00000048371 Pdp2 4833426J09Rik|Gm1705|mKIAA1348 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding common_peak2_135_1484_-0.452874021154887_10.3098102051107_13.8122799258481 chr6 72936845 72938865 + 13.8122799258481 NA Intergenic Intergenic 20377 NM_001039392 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding unique_peak2_12_181_-1.57898570674412_6.71830178682664_13.8119123660623 chr9 118420388 118421811 + 13.8119123660623 NA Intergenic Intergenic -8740 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak1_86_938_-0.582183516987921_9.58388958915981_13.8110386641553 chr19 11045240 11046724 + 13.8110386641553 NA Intergenic Lx5c|LINE|L1 4584 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA common_peak2_86_938_-0.582183516987921_9.58388958915981_13.8110386641553 chr2 90846417 90848126 + 13.8110386641553 NA 5' UTR (NM_019758, exon 1 of 13) 5' UTR (NM_019758, exon 1 of 13) 116 NM_019758 56428 Mm.28023 NM_019758 ENSMUSG00000027282 Mtch2 2310034D24Rik|4930539J07Rik|HSPC032 mitochondrial carrier 2 protein-coding common_peak1_42_113_1.21283715608921_7.43930859220935_13.8099501406627 chr5 72739734 72740355 + 13.8099501406627 NA intron (NM_001289495, intron 1 of 14) L2a|LINE|L2 -3442 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_44_123_1.17198232717776_7.54018747397575_13.798116333007 chr2 101822810 101823650 + 13.798116333007 NA intron (NM_001110849, intron 2 of 9) intron (NM_001110849, intron 2 of 9) 15750 NM_001110849 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_96_449_0.671557172146372_9.14955977729022_13.7973368709586 chr1 138559002 138560248 + 13.7973368709586 NA intron (NM_001311148, intron 2 of 7) intron (NM_001311148, intron 2 of 7) 60132 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak1_84_917_-0.590708495561316_9.54699609563315_13.7955039553859 chr17 29614375 29615525 + 13.7955039553859 NA non-coding (NR_132314, exon 1 of 28) non-coding (NR_132314, exon 1 of 28) 161 NM_021419 58230 Mm.305994 NM_021419 ENSMUSG00000090083 Rnf8 3830404E21Rik|AIP37|laXp180 ring finger protein 8 protein-coding common_peak2_113_575_0.601186029294219_9.47051801608942_13.7954059840463 chr11 115932722 115934360 + 13.7954059840463 NA promoter-TSS (NM_020483) promoter-TSS (NM_020483) -49 NM_130454 170472 Mm.379351 NM_130454 ENSMUSG00000020752 Recql5 RecQ5|Recq5b|Recql5b RecQ protein-like 5 protein-coding common_peak1_13_191_-1.52501006188959_6.82245746977636_13.7932696637291 chrX 136741800 136742147 + 13.7932696637291 NA promoter-TSS (NR_033324) promoter-TSS (NR_033324) -364 NM_019768 56397 Mm.27218 NM_019768 ENSMUSG00000031422 Morf4l2 2410017O14Rik|Mrgx|Sid393p|mKIAA0026 mortality factor 4 like 2 protein-coding common_peak1_32_67_1.48985710641054_6.83239139445561_13.7932696637291 chr2 11220875 11221379 + 13.7932696637291 NA intron (NM_008859, intron 1 of 17) ORR1E|LTR|ERVL-MaLR 48745 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_113_1235_-0.500351997167844_10.0212870293205_13.7854689335623 chr4 32164024 32165916 + 13.7854689335623 NA Intergenic MIR|SINE|MIR 200863 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_103_1124_-0.527063419090755_9.87217757655902_13.7850260974876 chr7 140881700 140882890 + 13.7850260974876 NA promoter-TSS (NM_011875) promoter-TSS (NM_011875) 14 NM_022433 64384 Mm.29760 NM_022433 ENSMUSG00000025486 Sirt3 2310003L23Rik|AI848213|Sir2l3 sirtuin 3 protein-coding common_peak1_44_497_-0.83382329450345_8.54309028481636_13.7803088483589 chr4 119293943 119294530 + 13.7803088483589 NA exon (NM_011732, exon 1 of 8) exon (NM_011732, exon 1 of 8) 277 NM_011732 22608 Mm.258204 NM_011732 ENSMUSG00000028639 Ybx1 1700102N10Rik|C79409|EF1A|MSY1|Nsep1|YB-1|dbpB|mYB-1a Y box protein 1 protein-coding common_peak2_120_629_0.577358826248169_9.58788743151136_13.7761330733377 chr3 107695465 107696679 + 13.7761330733377 NA intron (NM_145542, intron 1 of 16) CpG 476 NM_145542 229709 Mm.220328 NM_145542 ENSMUSG00000027893 Ahcyl1 1110034F20Rik|AA409031|AA414901|Ahcy-rs3|DCAL|Irbit S-adenosylhomocysteine hydrolase-like 1 protein-coding common_peak1_133_1460_-0.455584451467418_10.2849482370698_13.7742800745426 chr7 127024919 127026813 + 13.7742800745426 NA exon (NM_010772, exon 2 of 5) exon (NM_010772, exon 2 of 5) 613 NM_010772 17188 Mm.378964 NM_010772 ENSMUSG00000030678 Maz MAZI|PUR1|Pur-1|SAF-1|SAF-2 MYC-associated zinc finger protein (purine-binding transcription factor) protein-coding common_peak1_102_493_0.643180652192061_9.26995755768071_13.7735468009892 chr12 82393439 82395349 + 13.7735468009892 NA intron (NM_172579, intron 7 of 20) intron (NM_172579, intron 7 of 20) 83045 NM_172579 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak2_120_1313_-0.483182715686882_10.1181582024789_13.7724130120257 chr8 60992393 60994547 + 13.7724130120257 NA 5' UTR (NM_001293637, exon 1 of 35) 5' UTR (NM_001293637, exon 1 of 35) 277 NM_175089 18004 Mm.486881 NM_175089 ENSMUSG00000031644 Nek1 D8Ertd790e|kat NIMA (never in mitosis gene a)-related expressed kinase 1 protein-coding common_peak2_211_2383_-0.350202132646338_11.044067454139_13.7705360066913 chr2 168229202 168231693 + 13.7705360066913 NA promoter-TSS (NR_132310) promoter-TSS (NR_132310) -68 NM_001310084 13480 Mm.422657 NM_010072 ENSMUSG00000078919 Dpm1 AI118379|AI194292 dolichol-phosphate (beta-D) mannosyltransferase 1 protein-coding unique_peak1_18_17_2.43043920195458_5.3851446024196_13.7657863362564 chr1 165836885 165837297 + 13.7657863362564 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 48410 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_239_2729_-0.326191869650442_11.251589300982_13.7645237138449 chr6 47593540 47595840 + 13.7645237138449 NA intron (NM_001146689, intron 1 of 19) CpG 340 NM_007971 14056 Mm.246688 NM_007971 ENSMUSG00000029687 Ezh2 Enx-1|Enx1h|KMT6|mKIAA4065 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding unique_peak2_3_90_-2.66476599944624_5.17541164047558_13.7643006066794 chr5 75835101 75835777 + 13.7643006066794 NA Intergenic Intergenic 142989 NM_010612 16542 Mm.285 NM_010612 ENSMUSG00000062960 Kdr 6130401C07|Flk-1|Flk1|Krd-1|Ly73|VEGFR-2|VEGFR2|sVEGFR-2 kinase insert domain protein receptor protein-coding common_peak1_123_653_0.566760001608936_9.63652682630255_13.7552517999835 chr17 79614678 79615893 + 13.7552517999835 NA intron (NM_201361, intron 1 of 10) CpG 385 NM_201361 381110 Mm.209801 NM_201361 ENSMUSG00000036368 Rmdn2 AW061290|Fam82a1|RMD-2|mRMD-2 regulator of microtubule dynamics 2 protein-coding common_peak1_31_367_-1.00069638174549_8.02321376518427_13.7529516534555 chr3 153944651 153945321 + 13.7529516534555 NA promoter-TSS (NM_007382) promoter-TSS (NM_007382) -343 NM_007382 11364 Mm.10530 NM_007382 ENSMUSG00000062908 Acadm AU018656|MCAD acyl-Coenzyme A dehydrogenase, medium chain protein-coding common_peak1_197_1289_0.414911424689905_10.5406110626556_13.7528631882012 chr8 105565064 105567184 + 13.7528631882012 NA promoter-TSS (NM_013477) promoter-TSS (NM_013477) -84 NM_013477 11972 Mm.17708 NM_013477 ENSMUSG00000013160 Atp6v0d1 AI267038|Ac39|Atp6d|P39|VATX|Vma6 ATPase, H+ transporting, lysosomal V0 subunit D1 protein-coding common_peak1_35_406_-0.937587311207224_8.20009132866264_13.7514618603522 chr12 84408473 84408991 + 13.7514618603522 NA promoter-TSS (NM_028377) promoter-TSS (NM_028377) 297 NM_007647 12499 Mm.10211 NM_007647 ENSMUSG00000021236 Entpd5 AI196558|AI987697|Cd39l4|ER-UDPase|NTPDase-5|NTPDase5|Pcph|mNTPase ectonucleoside triphosphate diphosphohydrolase 5 protein-coding common_peak2_850_9188_0.162748284605064_13.2470662946226_13.7513980325726 chr9 61661615 61672194 + 13.7513980325726 NA Intergenic B4|SINE|B4 247606 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_207_2334_-0.353948656397025_11.0122325063985_13.7488604417458 chr3 96268012 96270250 + 13.7488604417458 NA promoter-TSS (NM_175666) promoter-TSS (NM_175666) 477 NM_178215 319154 Mm.383293 NM_178215 ENSMUSG00000074403 Hist2h3b H3-615|H3-616 histone cluster 2, H3b protein-coding common_peak2_46_134_1.12631549037519_7.63997334223842_13.7482574827076 chr16 50429544 50430453 + 13.7482574827076 NA intron (NM_027444, intron 1 of 16) CpG 2391 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding common_peak1_452_4011_0.242549010526652_12.0913803958755_13.7477801784675 chr1 43932845 43935043 + 13.7477801784675 NA promoter-TSS (NM_009418) promoter-TSS (NM_009418) -50 NM_001310540 22019 Mm.401675 NM_009418 ENSMUSG00000041763 Tpp2 TPP-2|TppII tripeptidyl peptidase II protein-coding common_peak1_72_286_0.817412099709941_8.57361297653066_13.7472897385028 chr11 32454869 32456168 + 13.7472897385028 NA exon (NM_173784, exon 1 of 3) exon (NM_173784, exon 1 of 3) 146 NM_173784 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding common_peak1_182_2032_-0.380740532644475_10.7990242335225_13.7469204198199 chr13 111795523 111798340 + 13.7469204198199 NA intron (NM_011945, intron 1 of 19) intron (NM_011945, intron 1 of 19) 12052 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding common_peak2_126_677_0.557069231037701_9.68367607865519_13.7422725879249 chr2 163710166 163713802 + 13.7422725879249 NA intron (NM_001277096, intron 2 of 3) intron (NM_001277096, intron 2 of 3) 17947 NM_011106 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak1_61_672_-0.701168178689654_9.04387860526549_13.7387077783987 chr12 69472048 69472866 + 13.7387077783987 NA intron (NR_038060, intron 2 of 4) intron (NR_038060, intron 2 of 4) 3093 NR_038060 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA unique_peak1_20_23_2.19251214307734_5.68121857225983_13.7386867661605 chr8 94443825 94444267 + 13.7386867661605 NA Intergenic Intergenic -8943 NR_015514 320377 Mm.486022 NR_015514 9330175E14Rik A630085K21 RIKEN cDNA 9330175E14 gene ncRNA common_peak2_30_357_-1.01713357252995_7.97524899099928_13.7378377250734 chr7 16387129 16388362 + 13.7378377250734 NA exon (NM_019748, exon 1 of 9) exon (NM_019748, exon 1 of 9) 151 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding unique_peak1_16_12_2.70309654283308_5.05198798955763_13.7348649895308 chr19 29264549 29265043 + 13.7348649895308 NA intron (NM_008413, intron 3 of 24) Lx8b|LINE|L1 12993 NM_008413 16452 Mm.275839 NM_008413 ENSMUSG00000024789 Jak2 Fd17 Janus kinase 2 protein-coding common_peak1_16_12_2.70309654283308_5.05198798955763_13.7348649895308 chr11 106763451 106763842 + 13.7348649895308 NA intron (NR_073165, intron 6 of 9) intron (NR_073165, intron 6 of 9) 12420 NM_001033435 380732 Mm.343952 NM_001033435 ENSMUSG00000040528 Milr1 Allergin-1|Gm885|Mca32 mast cell immunoglobulin like receptor 1 protein-coding unique_peak1_16_12_2.70309654283308_5.05198798955763_13.7348649895308-2 chr3 98083963 98084354 + 13.7348649895308 NA intron (NM_010928, intron 5 of 33) intron (NM_010928, intron 5 of 33) 70620 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_301_2320_0.314601888827426_11.3378317517582_13.734690471214 chr11 61929121 61931773 + 13.734690471214 NA promoter-TSS (NM_019921) promoter-TSS (NM_019921) -190 NM_019921 56697 Mm.274404 NM_019921 ENSMUSG00000047804 Akap10 1500031L16Rik|B130049N18Rik|D-AKAP-2|D-AKAP2|PRKA10 A kinase (PRKA) anchor protein 10 protein-coding common_peak1_333_2661_0.295064060962424_11.5258268863931_13.7344569201869 chr1 52498828 52501728 + 13.7344569201869 NA 5' UTR (NM_008667, exon 1 of 8) 5' UTR (NM_008667, exon 1 of 8) 170 NM_008667 17936 Mm.25903 NM_008667 ENSMUSG00000002881 Nab1 - Ngfi-A binding protein 1 protein-coding unique_peak2_29_347_-1.03428706325103_7.92579996422322_13.7295713611138 chr4 132344462 132345984 + 13.7295713611138 NA intron (NM_133878, intron 1 of 9) CpG 527 NM_001197082 100088 Mm.255045 NM_133878 ENSMUSG00000028896 Rcc1 4931417M11Rik|AI326872|Chc1 regulator of chromosome condensation 1 protein-coding common_peak1_28_337_-1.05221612176962_7.87477137539738_13.7288817711315-2 chr8 95083709 95084362 + 13.7288817711315 NA intron (NM_028805, intron 2 of 19) intron (NM_028805, intron 2 of 19) 2834 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding common_peak1_28_337_-1.05221612176962_7.87477137539738_13.7288817711315 chr2 31062846 31063427 + 13.7288817711315 NA intron (NM_001177648, intron 6 of 16) intron (NM_001177648, intron 6 of 16) 33364 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak2_176_1099_0.446373112783087_10.3264743648036_13.7275671209239 chr14 19974664 19977569 + 13.7275671209239 NA intron (NM_001285908, intron 1 of 3) intron (NM_001285908, intron 1 of 3) 577 NM_001285911 14702 Mm.41737 NM_010315 ENSMUSG00000043004 Gng2 - guanine nucleotide binding protein (G protein), gamma 2 protein-coding common_peak2_170_1046_0.45658750877265_10.2603394813171_13.7268324039223 chr13 51797446 51801726 + 13.7268324039223 NA Intergenic B2_Mm2|SINE|B2 -5839 NM_013660 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_114_583_0.596741832091812_9.48819547492592_13.7266718552689 chr1 82316326 82317323 + 13.7266718552689 NA intron (NM_029777, intron 1 of 6) CpG 245 NM_029777 76867 Mm.226994 NM_029777 ENSMUSG00000026142 Rhbdd1 4930418P06Rik|RRP4|mRHBDD1 rhomboid domain containing 1 protein-coding common_peak1_114_583_0.596741832091812_9.48819547492592_13.7266718552689-2 chr1 155055033 155057293 + 13.7266718552689 NA Intergenic Intergenic 43473 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_49_548_-0.788034835682458_8.70664492116397_13.7260819581338 chr9 41153787 41154696 + 13.7260819581338 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) 3253 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak2_293_2236_0.320273523191204_11.2874863026547_13.7247991084577 chr18 34220279 34222803 + 13.7247991084577 NA non-coding (NR_040534, exon 1 of 2) non-coding (NR_040534, exon 1 of 2) 231 NR_040534 633395 Mm.414290 NR_040534 ENSMUSG00000073607 Gm10548 ENSMUSG00000073607 ribosomal protein L29 pseudogene pseudo common_peak1_62_682_-0.694132608338307_9.06867546412094_13.7230860041737 chr14 120520411 120521493 + 13.7230860041737 NA Intergenic Intergenic 42491 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding common_peak1_550_5202_0.214095507553022_12.4521757457532_13.7222622763589 chr19 5387889 5391411 + 13.7222622763589 NA promoter-TSS (NM_016882) promoter-TSS (NM_016882) -947 NM_016882 20227 Mm.34562 NM_016882 ENSMUSG00000039148 Sart1 U5-110K squamous cell carcinoma antigen recognized by T cells 1 protein-coding common_peak2_426_3707_0.251630031686911_11.982240544469_13.7196912076658 chr12 85967598 85975066 + 13.7196912076658 NA intron (NM_001081423, intron 29 of 33) intron (NM_001081423, intron 29 of 33) 107709 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak1_67_735_-0.666801072710129_9.19016141970195_13.7173314656055 chr11 104424634 104426015 + 13.7173314656055 NA intron (NM_001081045, intron 1 of 13) intron (NM_001081045, intron 1 of 13) 16967 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding unique_peak2_5_112_-2.2596281166958_5.69036490406729_13.7173062077547 chr2 69380552 69381390 + 13.7173062077547 NA intron (NM_175512, intron 1 of 4) intron (NM_175512, intron 1 of 4) 509 NM_175512 241452 Mm.211655 NM_175512 ENSMUSG00000027068 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 protein-coding common_peak2_149_1643_-0.426232564205659_10.4698783015789_13.714521996057 chr3 116422743 116425276 + 13.714521996057 NA promoter-TSS (NM_001080818) promoter-TSS (NM_001080818) 23 NM_001080818 229776 Mm.17647 NM_001080818 ENSMUSG00000033502 Cdc14a A830059A17Rik|CDC14A2|CDC14a1|Cdc14 CDC14 cell division cycle 14A protein-coding unique_peak1_30_59_1.55979160912579_6.68678640017141_13.7084131043446 chr12 117844887 117845555 + 13.7084131043446 NA intron (NM_146040, intron 1 of 9) ID_B1|SINE|B4 1360 NM_146040 217946 Mm.281149 NM_146040 ENSMUSG00000021175 Cdca7l BC006933|JPO2 cell division cycle associated 7 like protein-coding common_peak2_142_807_0.513978863830632_9.91520091466711_13.704736208866 chr5 139371273 139373064 + 13.704736208866 NA intron (NM_028469, intron 2 of 4) CpG -2423 NR_029768 723898 NR_029768 ENSMUSG00000065593 Mir339 Mirn339|mir-339|mmu-mir-339 microRNA 339 ncRNA common_peak2_81_345_0.753427348615057_8.81134190194425_13.7046992655191 chr5 114650635 114652021 + 13.7046992655191 NA intron (NM_022017, intron 1 of 15) intron (NM_022017, intron 1 of 15) 7093 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding common_peak2_58_641_-0.720903082080477_8.96597794608206_13.7044652798194 chr17 23828219 23830017 + 13.7044652798194 NA promoter-TSS (NM_026305) promoter-TSS (NM_026305) -9 NM_026305 67673 Mm.153758 NM_026305 ENSMUSG00000055839 Elob 0610040H15Rik|Tceb2 elongin B protein-coding common_peak2_644_6402_0.193434978660108_12.7412497839555_13.7031961340365 chr19 53527905 53539764 + 13.7031961340365 NA exon (NM_001085390, exon 2 of 4) exon (NM_001085390, exon 2 of 4) 4516 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding unique_peak1_11_2_4.20220065618458_3.68606282881345_13.6968808886903 chr9 56130708 56131117 + 13.6968808886903 NA Intergenic Intergenic 30158 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_272_3142_-0.301446997925421_11.467203057836_13.6952832749494 chr7 5060367 5063379 + 13.6952832749494 NA promoter-TSS (NM_133671) promoter-TSS (NM_133671) -270 NM_133671 22185 Mm.360389 NM_133671 ENSMUSG00000030435 U2af2 65kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein-coding common_peak2_214_1449_0.391995572229975_10.6978349710173_13.694638739243 chr10 93123013 93125392 + 13.694638739243 NA Intergenic Intergenic -36674 NM_146239 237459 Mm.217404 NM_146239 ENSMUSG00000020015 Cdk17 6430598J10Rik|Pctk2 cyclin-dependent kinase 17 protein-coding common_peak2_62_224_0.907827968734745_8.26769517558441_13.6936109824506 chr2 178023008 178023978 + 13.6936109824506 NA intron (NM_001177399, intron 1 of 3) RMER17B|LTR|ERVK 209 NM_001177399 626848 Mm.422604 NM_001177399 ENSMUSG00000074519 Zfp971 Etohi1 zinc finger protein 971 protein-coding common_peak2_108_538_0.617600772777131_9.38294184914107_13.6888256561739 chr17 26560654 26562300 + 13.6888256561739 NA promoter-TSS (NM_026170) promoter-TSS (NM_026170) -35 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding unique_peak1_21_26_2.10491024053048_5.80734262242871_13.6887782751191 chr12 82227179 82227716 + 13.6887782751191 NA intron (NM_001167983, intron 1 of 23) B3A|SINE|B2 57431 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak1_21_26_2.10491024053048_5.80734262242871_13.6887782751191-2 chr6 86793384 86793843 + 13.6887782751191 NA promoter-TSS (NM_013471) promoter-TSS (NM_013471) -29 NM_013471 11746 Mm.259702 NM_013471 ENSMUSG00000029994 Anxa4 AI265406|AIV|AW106930|Anx4|Xanx-4 annexin A4 protein-coding common_peak1_53_588_-0.753303945804509_8.82547185092821_13.6860810124893 chr10 39171193 39171963 + 13.6860810124893 NA Intergenic Intergenic -7784 NM_001127376 327743 Mm.208111 NM_001127376 ENSMUSG00000062074 Wisp3 CCN6|ENSMUSG00000062074|Gm735|WISP-3 WNT1 inducible signaling pathway protein 3 protein-coding common_peak1_67_255_0.856760883346883_8.42838044167344_13.685613680897 chr5 140829735 140830483 + 13.685613680897 NA exon (NM_010302, exon 1 of 4) exon (NM_010302, exon 1 of 4) 322 NM_010302 14673 Mm.370185 NM_010302 ENSMUSG00000000149 Gna12 AI414047|AI504261|Galpha12 guanine nucleotide binding protein, alpha 12 protein-coding common_peak2_67_255_0.856760883346883_8.42838044167344_13.685613680897 chr2 76369835 76370924 + 13.685613680897 NA exon (NM_153405, exon 1 of 10) exon (NM_153405, exon 1 of 10) 395 NM_153405 241490 Mm.33310 NM_153405 ENSMUSG00000042369 Rbm45 Drb1|Drbp1|G430095G15Rik RNA binding motif protein 45 protein-coding common_peak2_37_426_-0.911115745037244_8.28253438710187_13.681668592218 chr17 5248563 5250098 + 13.681668592218 NA intron (NM_001085355, intron 5 of 19) intron (NM_001085355, intron 5 of 19) 169437 NM_175349 106557 Mm.432764 NM_175349 ENSMUSG00000101959 Ldhal6b 4933402O15Rik|AI326310|LDHL|Ldhal lactate dehydrogenase A-like 6B protein-coding common_peak1_68_261_0.849172318709345_8.45800916089212_13.6785991759963 chr6 108709599 108710338 + 13.6785991759963 NA Intergenic Intergenic -49034 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_68_261_0.849172318709345_8.45800916089212_13.6785991759963 chr5 121220034 121221049 + 13.6785991759963 NA exon (NM_181421, exon 1 of 76) exon (NM_181421, exon 1 of 76) 322 NM_181421 269700 Mm.184589 NM_181421 ENSMUSG00000042744 Gm15800 A130010L24|AU042671|BC019639|EG545802|OTTMUSG00000026283|mKIAA0614 predicted gene 15800 protein-coding common_peak2_41_109_1.22272724146019_7.39272333425476_13.6762321259976 chr5 24729961 24730876 + 13.6762321259976 NA 5' UTR (NM_001081441, exon 1 of 6) 5' UTR (NM_001081441, exon 1 of 6) 262 NM_001081441 269633 Mm.392539 NM_026621 ENSMUSG00000055235 Wdr86 2810046M22Rik|BC059069 WD repeat domain 86 protein-coding common_peak2_341_2749_0.290029643590429_11.5702307250946_13.6760255218915 chr2 165882113 165886098 + 13.6760255218915 NA intron (NM_001252584, intron 1 of 22) intron (NM_001252584, intron 1 of 22) 733 NM_001252584 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_110_1200_-0.506102268340939_9.97696930153517_13.6683058087477 chr5 135538187 135539593 + 13.6683058087477 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 6232 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak1_134_1470_-0.452268377536914_10.2964473424864_13.6675330285923 chr7 38018641 38019783 + 13.6675330285923 NA exon (NM_011274, exon 1 of 11) exon (NM_011274, exon 1 of 11) 340 NM_011274 19777 Mm.387220 NM_011274 ENSMUSG00000030421 Uri1 C80913|NNX3|Rmp URI1, prefoldin-like chaperone protein-coding common_peak2_101_486_0.646505126231471_9.25103052519808_13.665577094249 chr7 114084801 114087214 + 13.665577094249 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 31774 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak1_45_129_1.14270530225141_7.59372046415416_13.6648596424142 chr16 50429521 50430415 + 13.6648596424142 NA intron (NM_027444, intron 1 of 16) (TCC)n|Simple_repeat|Simple_repeat 2421 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding common_peak2_128_1402_-0.464437607212666_10.2220804900136_13.6635481720358 chr8 85071093 85072677 + 13.6635481720358 NA exon (NM_001039514, exon 1 of 9) exon (NM_001039514, exon 1 of 9) 128 NM_001039514 330817 Mm.193086 NM_201408 ENSMUSG00000060038 Dhps Dhs deoxyhypusine synthase protein-coding common_peak2_669_6730_0.188656456879038_12.8109333697749_13.6623811996563 chr17 87359838 87370298 + 13.6623811996563 NA intron (NM_028639, intron 18 of 19) intron (NM_028639, intron 18 of 19) 62673 NM_029298 75467 Mm.50108 NM_029298 ENSMUSG00000036557 Stpg4 1700011E24Rik|GSE sperm tail PG rich repeat containing 4 protein-coding common_peak2_142_1562_-0.437911716417236_10.391146204791_13.6605263478794 chr11 70668032 70670561 + 13.6605263478794 NA TTS (NM_001190378) TTS (NM_001190378) 120 NM_172561 216873 Mm.432524 NM_172561 ENSMUSG00000018287 Spag7 5730443G10|ACRP|FSA-1|Fsa1l sperm associated antigen 7 protein-coding common_peak1_88_958_-0.572368636253943_9.61920268689116_13.6578503483249 chr5 142906099 142906803 + 13.6578503483249 NA intron (NM_007393, intron 1 of 5) CpG 303 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding unique_peak2_22_278_-1.18566050773568_7.53129105796135_13.6559468084984 chr4 41463890 41464875 + 13.6559468084984 NA promoter-TSS (NM_025539) promoter-TSS (NM_025539) 466 NM_024241 109242 Mm.370288 NM_024241 ENSMUSG00000028438 Kif24 4933425J19Rik|9430029L23Rik kinesin family member 24 protein-coding common_peak1_159_951_0.476153397881902_10.1328944622489_13.6409467566025 chr18 77713112 77714530 + 13.6409467566025 NA promoter-TSS (NR_027978) promoter-TSS (NR_027978) 189 NM_178670 212163 Mm.23293 NM_178670 ENSMUSG00000047466 8030462N17Rik Akd2|Ark2N RIKEN cDNA 8030462N17 gene protein-coding common_peak1_147_849_0.50168924255906_9.98216365230459_13.6288243906768 chr7 118797418 118798956 + 13.6288243906768 NA intron (NM_027815, intron 19 of 30) intron (NM_027815, intron 19 of 30) 57426 NM_001168220 66356 Mm.482278 NM_023197 ENSMUSG00000030980 Knop1 2310008H09Rik|Tsg118 lysine rich nucleolar protein 1 protein-coding common_peak2_461_4120_0.238689619832206_12.1281235581966_13.626548293453 chr1 43932518 43935532 + 13.626548293453 NA promoter-TSS (NM_009418) promoter-TSS (NM_009418) 31 NM_009418 22019 Mm.401675 NM_009418 ENSMUSG00000041763 Tpp2 TPP-2|TppII tripeptidyl peptidase II protein-coding common_peak2_47_526_-0.801271372358762_8.64102346545783_13.625345745486 chr19 34877644 34879430 + 13.625345745486 NA promoter-TSS (NM_023792) promoter-TSS (NM_023792) -620 NM_023792 75735 Mm.24742 NM_023792 ENSMUSG00000033610 Pank1 Pank|Pank1b pantothenate kinase 1 protein-coding common_peak1_175_1091_0.446877535333167_10.3161959085864_13.6243419714843 chr3 59130208 59132722 + 13.6243419714843 NA promoter-TSS (NM_133200) promoter-TSS (NM_133200) -137 NM_001287123 140795 Mm.439021 NM_133200 ENSMUSG00000036381 P2ry14 A330108O13Rik|Gpr105|P2Y14 purinergic receptor P2Y, G-protein coupled, 14 protein-coding common_peak2_177_1109_0.443286718713075_10.337987320594_13.6241828265696 chr15 65786227 65788114 + 13.6241828265696 NA 5' UTR (NM_133766, exon 1 of 23) 5' UTR (NM_133766, exon 1 of 23) 129 NM_133766 76740 Mm.260647 NM_133766 ENSMUSG00000015002 Efr3a A130089M23Rik|BB071175|C76891|C920006C10Rik|D030063F01Rik|mKIAA0143 EFR3 homolog A protein-coding common_peak2_49_547_-0.785404579637786_8.70532979314163_13.6239349473801 chr3 95893157 95894987 + 13.6239349473801 NA 5' UTR (NM_146104, exon 1 of 6) 5' UTR (NM_146104, exon 1 of 6) 151 NM_146134 226548 Mm.306954 NM_146104 ENSMUSG00000015750 Aph1a 6530402N02Rik|APH-1a aph1 homolog A, gamma secretase subunit protein-coding common_peak1_110_554_0.607574206127227_9.42013106430108_13.6235107662685 chr12 16999467 17000731 + 13.6235107662685 NA promoter-TSS (NM_172574) promoter-TSS (NM_172574) 19 NM_172574 217430 Mm.379451 NM_172574 ENSMUSG00000045679 Pqlc3 C78076|E030024M05Rik PQ loop repeat containing protein-coding common_peak1_131_718_0.540696609594294_9.76019626523644_13.621938808799 chr10 117860027 117861174 + 13.621938808799 NA Intergenic Intergenic -14626 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak2_91_415_0.69124570832513_9.04606257230366_13.6212324882981 chr12 117843280 117844491 + 13.6212324882981 NA promoter-TSS (NM_146040) promoter-TSS (NM_146040) 24 NM_146040 217946 Mm.281149 NM_146040 ENSMUSG00000021175 Cdca7l BC006933|JPO2 cell division cycle associated 7 like protein-coding common_peak2_150_1653_-0.423223134185724_10.4801319520784_13.6208988559801 chrX 52911623 52914467 + 13.6208988559801 NA intron (NM_001290546, intron 1 of 8) intron (NM_001290546, intron 1 of 8) 831 NM_001290546 70998 Mm.26870 NM_027642 ENSMUSG00000025626 Phf6 2700007B13Rik|4931428F02Rik|mKIAA1823 PHD finger protein 6 protein-coding common_peak1_26_316_-1.08613146329981_7.7652732984895_13.6202269864313 chr6 127986672 127987322 + 13.6202269864313 NA intron (NM_175414, intron 3 of 8) intron (NM_175414, intron 3 of 8) 99375 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak1_126_1379_-0.468241857491487_10.1963316229198_13.6193679823557 chr14 106027139 106028857 + 13.6193679823557 NA Intergenic Intergenic -78200 NM_198601 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_38_435_-0.895240875169066_8.32056388719239_13.6193617174345 chr11 119933336 119933996 + 13.6193617174345 NA Intergenic Intergenic -9426 NM_001037754 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding common_peak2_140_1538_-0.440511912748907_10.3675215599538_13.6162216601633 chr6 130061999 130067607 + 13.6162216601633 NA intron (NM_001252577, intron 2 of 6) intron (NM_001252577, intron 2 of 6) 2455 NM_053153 93970 Mm.333431 NM_053153 Klra18 Ly49r killer cell lectin-like receptor, subfamily A, member 18 protein-coding common_peak2_508_4687_0.224158556655015_12.3068361327498_13.6154879154504 chr6 48660550 48668452 + 13.6154879154504 NA Intergenic Intergenic -11634 NM_174960 317758 Mm.116971 NM_174960 ENSMUSG00000051124 Gimap9 A630002K24|BB145400 GTPase, IMAP family member 9 protein-coding common_peak2_288_3345_-0.290953226469753_11.5627451168035_13.6129694727381 chr4 116555284 116559315 + 13.6129694727381 NA promoter-TSS (NM_029868) promoter-TSS (NM_029868) -428 NM_029868 77110 Mm.41715 NM_029868 ENSMUSG00000034042 Gpbp1l1 5330440M15Rik|BC002292 GC-rich promoter binding protein 1-like 1 protein-coding common_peak1_156_926_0.481050105780119_10.0969505815156_13.6087443312455 chr15 35370877 35372069 + 13.6087443312455 NA promoter-TSS (NM_177151) promoter-TSS (NM_177151) -73 NM_177151 666173 Mm.309250 NM_177151 ENSMUSG00000037646 Vps13b 1810042B05Rik|2310042E16Rik|4732488H20|C330002D13Rik|C87206|Coh1|D230005K13|mKIAA0532|mKIAA5032 vacuolar protein sorting 13B protein-coding common_peak1_104_509_0.631226793817961_9.30996683376784_13.6054604481707 chr14 14703034 14704076 + 13.6054604481707 NA intron (NM_001033270, intron 1 of 24) CpG 530 NM_001033270 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding common_peak1_175_1946_-0.387402492467276_10.7333359224867_13.6049567776667 chr7 82866089 82867882 + 13.6049567776667 NA promoter-TSS (NM_175366) promoter-TSS (NM_175366) -348 NM_175366 108797 Mm.306789 NM_175366 ENSMUSG00000057706 Mex3b 4931439A04Rik|M-04814|Rkhd3|mKIAA2009 mex3 RNA binding family member B protein-coding common_peak1_71_775_-0.642002857941748_9.27891141321625_13.6015235337387 chr9 96713080 96714158 + 13.6015235337387 NA intron (NM_175537, intron 2 of 2) intron (NM_175537, intron 2 of 2) 18056 NM_175537 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak2_70_765_-0.64804103607794_9.25718006388599_13.6005637979133 chr17 23725590 23727376 + 13.6005637979133 NA 5' UTR (NM_023058, exon 1 of 8) 5' UTR (NM_023058, exon 1 of 8) 147 NM_023058 268930 Mm.182193 NM_023058 ENSMUSG00000023908 Pkmyt1 6230424P17|AW209059|Myt1 protein kinase, membrane associated tyrosine/threonine 1 protein-coding common_peak1_28_336_-1.04794146666929_7.87263404784721_13.5994022867517 chr2 29656861 29657627 + 13.5994022867517 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 37524 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak2_20_258_-1.23933364388806_7.39714146574253_13.5991506340727-2 chr12 71047553 71049155 + 13.5991506340727 NA intron (NM_001081195, intron 11 of 23) intron (NM_001081195, intron 11 of 23) 32387 NM_001081195 238247 Mm.241601 NM_001081195 ENSMUSG00000048118 Arid4a A630009N03|A630067N03Rik|MmRBBP1|Rbbp1 AT rich interactive domain 4A (RBP1-like) protein-coding unique_peak2_20_258_-1.23933364388806_7.39714146574253_13.5991506340727 chr11 75281782 75283496 + 13.5991506340727 NA Intergenic Intergenic 65744 NM_001164223 68275 Mm.102574 NM_026653 ENSMUSG00000000751 Rpa1 5031405K23Rik|70kDa|AA589576|AW557552|RF-A|RP-A|Rpa replication protein A1 protein-coding common_peak1_91_990_-0.561055820720265_9.67221333682636_13.5951226102159 chr9 123528427 123529687 + 13.5951226102159 NA promoter-TSS (NM_030692) promoter-TSS (NM_030692) -825 NM_030692 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding common_peak1_48_145_1.08705167803067_7.73335039789535_13.5949779564852 chr13 85478701 85479536 + 13.5949779564852 NA Intergenic L1_Mus3|LINE|L1 -189632 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding unique_peak2_9_150_-1.77388282288066_6.35146332788475_13.5929201717569 chr11 79076001 79076668 + 13.5929201717569 NA intron (NM_013571, intron 1 of 17) intron (NM_013571, intron 1 of 17) 52737 NR_045873 790910 Mm.440410 NR_045873 Gm11201 ENSMUSG00000072637|OTTMUSG00000000169 predicted gene 11201 ncRNA common_peak1_205_2306_-0.353642093719886_10.994981241823_13.5921750152156 chr17 51178344 51179800 + 13.5921750152156 NA intron (NM_028162, intron 1 of 21) CpG 280 NM_028162 72238 Mm.120650 NM_028162 ENSMUSG00000023923 Tbc1d5 1600014N05Rik TBC1 domain family, member 5 protein-coding common_peak1_42_114_1.20023711930958_7.44560861059916_13.5890577641708 chr12 32162964 32163751 + 13.5890577641708 NA Intergenic RLTR11A2|LTR|ERVK 44981 NM_001146201 30955 Mm.101369 NM_020272 ENSMUSG00000020573 Pik3cg 5830428L06Rik|PI3Kgamma|p110gamma phosphoinositide-3-kinase, catalytic, gamma polypeptide protein-coding common_peak1_203_1347_0.40429061831831_10.598750090341_13.5888256214347 chr10 42274853 42276782 + 13.5888256214347 NA intron (NM_019740, intron 1 of 3) CpG-1005 925 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding common_peak1_60_213_0.923052464645826_8.20299321872406_13.5885107330071 chr5 113035348 113036414 + 13.5885107330071 NA Intergenic Intergenic -20343 NM_177078 320129 Mm.285619 NM_177078 ENSMUSG00000042249 Grk3 4833444A01Rik|AI851927|AW551196|Adrbk-2|Adrbk2|Bark-2 G protein-coupled receptor kinase 3 protein-coding common_peak2_60_213_0.923052464645826_8.20299321872406_13.5885107330071 chr17 87339171 87340848 + 13.5885107330071 NA intron (NM_028639, intron 12 of 19) intron (NM_028639, intron 12 of 19) 57123 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak2_230_1604_0.372498474916684_10.834606819468_13.5882193102755 chr9 107332901 107336183 + 13.5882193102755 NA intron (NM_133984, intron 4 of 10) intron (NM_133984, intron 4 of 10) 3808 NM_133984 69536 Mm.259467 NM_133984 ENSMUSG00000032579 Hemk1 2310008M14Rik|AW049265 HemK methyltransferase family member 1 protein-coding common_peak2_120_631_0.572786096458346_9.59017379640628_13.5850745527458 chr4 135018159 135020246 + 13.5850745527458 NA Intergenic Intergenic 88222 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding common_peak1_40_455_-0.871446749099316_8.39716663961508_13.5838178128845 chr15 73139572 73140227 + 13.5838178128845 NA intron (NM_153178, intron 2 of 18) intron (NM_153178, intron 2 of 18) 45048 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak2_57_195_0.960565781583717_8.09499273490707_13.580121994449 chr1 52726483 52727485 + 13.580121994449 NA intron (NM_133829, intron 1 of 6) CpG 334 NM_178081 98682 Mm.491173 NM_133829 ENSMUSG00000041439 Mfsd6 2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2 major facilitator superfamily domain containing 6 protein-coding unique_peak2_16_219_-1.37782345255049_7.09244798724942_13.5784490961539 chr16 5012702 5014146 + 13.5784490961539 NA TTS (NM_028720) TTS (NM_028720) 129 NM_133185 66049 Mm.27792 NM_133185 ENSMUSG00000022540 Rogdi 0610011C19Rik|AU020118|C76152|Lzf rogdi homolog protein-coding common_peak2_76_313_0.782100791881438_8.68567114483235_13.5781006675842 chr11 32454588 32456047 + 13.5781006675842 NA promoter-TSS (NM_173784) promoter-TSS (NM_173784) -55 NM_173784 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding common_peak1_50_557_-0.776450534701731_8.73589604447832_13.5774962418815 chr18 32162014 32162763 + 13.5774962418815 NA promoter-TSS (NM_011946) promoter-TSS (NM_011946) -701 NM_011946 26405 Mm.211762 NM_011946 ENSMUSG00000024383 Map3k2 9630061B06Rik|AI585793|Mekk2|Mekk2b mitogen-activated protein kinase kinase kinase 2 protein-coding common_peak2_108_1176_-0.509156369508808_9.94632042028404_13.5732366419216 chrX 168671798 168674489 + 13.5732366419216 NA intron (NM_010832, intron 1 of 11) intron (NM_010832, intron 1 of 11) 759 NM_010832 17692 Mm.24248 NM_010832 ENSMUSG00000031358 Msl3 AU018931|Msl31|Msl3l1 male-specific lethal 3 homolog (Drosophila) protein-coding common_peak2_82_353_0.741900319085351_8.83855570962567_13.5702382387422 chr10 39413964 39415925 + 13.5702382387422 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 45145 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_42_475_-0.849090593053992_8.47027246678095_13.5668580830172 chr19 37109102 37109949 + 13.5668580830172 NA intron (NM_001290826, intron 4 of 10) intron (NM_001290826, intron 4 of 10) -64318 NR_045329 319931 Mm.446730 NR_045329 ENSMUSG00000097591 A330032B11Rik - RIKEN cDNA A330032B11 gene ncRNA common_peak2_199_1310_0.409400155473698_10.5611520479586_13.5664290738105 chr9 73070153 73074326 + 13.5664290738105 NA intron (NM_001301232, intron 1 of 5) B2_Mm2|SINE|B2 8091 NM_001301232 11891 Mm.34867 NM_023635 ENSMUSG00000032202 Rab27a 2210402C08Rik|2410003M20Rik|4933437C11Rik|ash RAB27A, member RAS oncogene family protein-coding common_peak2_44_495_-0.828017672822243_8.54018747397575_13.5658892564768 chr11 51915622 51916997 + 13.5658892564768 NA Intergenic Intergenic -51322 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak2_44_495_-0.828017672822243_8.54018747397575_13.5658892564768-2 chr5 124345627 124347810 + 13.5658892564768 NA intron (NM_013812, intron 3 of 3) intron (NM_013812, intron 3 of 3) 7910 NM_013812 13445 Mm.391838 NM_013812 ENSMUSG00000029394 Cdk2ap1 Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein-coding common_peak2_78_849_-0.609219939911748_9.42670906106919_13.5658157466743 chr19 3999637 4001158 + 13.5658157466743 NA promoter-TSS (NM_025529) promoter-TSS (NM_025529) -183 NM_025529 66387 Mm.259222 NM_025529 ENSMUSG00000024869 Nudt8 2310039H17Rik nudix (nucleoside diphosphate linked moiety X)-type motif 8 protein-coding common_peak2_126_679_0.552819758036343_9.68580081515587_13.5582436750121 chr1 82724416 82725840 + 13.5582436750121 NA intron (NM_001310695, intron 1 of 7) CpG 238 NM_001310699 75734 Mm.396863 NM_029409 ENSMUSG00000026150 Mff 5230400G24Rik|AI314724 mitochondrial fission factor protein-coding common_peak1_19_247_-1.2630620827561_7.32266526900883_13.5560945552311 chr6 129741391 129741907 + 13.5560945552311 NA Intergenic MTC-int|LTR|ERVL-MaLR -1165 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak2_80_340_0.752714153968705_8.78998500600852_13.5550174483111 chr6 50430505 50432365 + 13.5550174483111 NA intron (NM_001163645, intron 1 of 21) intron (NM_001163645, intron 1 of 21) 24735 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak2_54_597_-0.742710655812189_8.85264634629201_13.5537252276813 chr2 128442900 128445383 + 13.5537252276813 NA Intergenic Intergenic -14790 NR_028590 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_54_597_-0.742710655812189_8.85264634629201_13.5537252276813 chr11 63921595 63922292 + 13.5537252276813 NA 5' UTR (NM_018805, exon 1 of 2) 5' UTR (NM_018805, exon 1 of 2) 341 NM_018805 54710 Mm.274426 NM_018805 ENSMUSG00000070407 Hs3st3b1 3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 protein-coding common_peak2_315_2472_0.303277189096091_11.423685118938_13.5492458329844 chr7 126774034 126778089 + 13.5492458329844 NA promoter-TSS (NM_026875) promoter-TSS (NM_026875) -914 NM_026875 66090 Mm.27114 NM_025347 ENSMUSG00000042675 Ypel3 0610043B10Rik|1190001G19Rik|Suap yippee-like 3 (Drosophila) protein-coding common_peak2_171_1057_0.451827880512637_10.2730378523703_13.5450166073359 chr11 60933744 60936693 + 13.5450166073359 NA intron (NM_008928, intron 1 of 11) intron (NM_008928, intron 1 of 11) 3161 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding common_peak2_115_593_0.587568816084515_9.50810352884302_13.543438699928 chr16 52054577 52057813 + 13.543438699928 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 24646 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_221_2501_-0.338335595614769_11.1196982763584_13.538477611059 chr3 103860264 103863701 + 13.538477611059 NA intron (NR_104070, intron 3 of 22) intron (NR_104070, intron 3 of 22) 1705 NM_008979 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding common_peak2_128_1400_-0.462379554023585_10.221051463419_13.5355245521793 chr8 83593049 83595377 + 13.5355245521793 NA intron (NM_134118, intron 1 of 12) intron (NM_134118, intron 1 of 12) 278 NM_027179 106529 Mm.352239 NM_027179 ENSMUSG00000031708 Tecr 2410016D23Rik|A230102P12Rik|AI173355|D17Ertd178e|Gpsn2|SC2 trans-2,3-enoyl-CoA reductase protein-coding common_peak1_114_1242_-0.493044190080655_10.0330884860122_13.534358503642 chr6 114642595 114643879 + 13.534358503642 NA intron (NM_028835, intron 1 of 18) CpG 140 NM_001253717 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding common_peak1_32_375_-0.977268904016758_8.06595439966926_13.5290060311262 chr3 30600612 30601211 + 13.5290060311262 NA Intergenic Intergenic -1041 NM_029690 76652 Mm.116928 NM_029690 ENSMUSG00000037737 Actrt3 1700119I24Rik|ARP-T3|Arpm1 actin related protein T3 protein-coding common_peak2_158_944_0.475705762487962_10.1220234003524_13.525981650486 chr6 72389371 72391077 + 13.525981650486 NA intron (NM_016794, intron 1 of 2) intron (NM_016794, intron 1 of 2) 443 NM_016794 22320 Mm.1838 NM_016794 ENSMUSG00000050732 Vamp8 AU041171|Edb|endobrevin vesicle-associated membrane protein 8 protein-coding common_peak1_23_286_-1.15113145858359_7.58934119738389_13.5252761642072 chr1 164069748 164070234 + 13.5252761642072 NA intron (NM_011346, intron 6 of 8) intron (NM_011346, intron 6 of 8) 7915 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak1_264_3037_-0.30505880218065_11.4163767534118_13.52514600217 chr11 48870697 48873140 + 13.52514600217 NA promoter-TSS (NM_008326) promoter-TSS (NM_008326) -572 NM_008326 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47 immunity-related GTPase family M member 1 protein-coding common_peak2_211_2378_-0.347173168609311_11.0425529721205_13.5242454758493 chr9 108516137 108518736 + 13.5242454758493 NA intron (NM_175143, intron 1 of 9) CpG 349 NM_175143 69232 Mm.335449 NM_175143 ENSMUSG00000006673 Qrich1 2610028H07Rik glutamine-rich 1 protein-coding common_peak1_55_607_-0.734750452239304_8.88055228732393_13.5230072820095 chr10 80754950 80755792 + 13.5230072820095 NA 5' UTR (NM_199322, exon 1 of 28) 5' UTR (NM_199322, exon 1 of 28) 165 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak1_551_5221_0.212045511493018_12.4564094980594_13.5225822272233 chr10 80147216 80153682 + 13.5225822272233 NA intron (NM_001305799, intron 1 of 7) CpG-1261 767 NM_001305799 59090 Mm.143813 NM_021565 ENSMUSG00000035621 Midn 3000003C15Rik midnolin protein-coding common_peak1_231_2624_-0.329601459369211_11.1933009777562_13.5170588580167 chr19 53464105 53465940 + 13.5170588580167 NA promoter-TSS (NR_028427) promoter-TSS (NR_028427) -226 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_104_1131_-0.519078012155063_9.88511923675435_13.5151920569967 chr15 88751649 88752760 + 13.5151920569967 NA intron (NM_181412, intron 1 of 2) CpG 493 NM_181412 223773 Mm.396622 NM_181412 ENSMUSG00000034333 Zbed4 1700009F06Rik zinc finger, BED type containing 4 protein-coding common_peak1_109_547_0.609871246611744_9.4029677062664_13.511954351177 chr17 27907139 27908494 + 13.511954351177 NA promoter-TSS (NM_026836) promoter-TSS (NM_026836) -92 NM_026836 68776 Mm.267998 NM_026836 ENSMUSG00000024218 Taf11 1110038O14Rik|28kDa|AI115401|AL024207|AW552398|PRO214|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding unique_peak2_11_169_-1.62222777923196_6.59827704652172_13.5089939194375 chr5 75826592 75827644 + 13.5089939194375 NA Intergenic Intergenic 151310 NM_010612 16542 Mm.285 NM_010612 ENSMUSG00000062960 Kdr 6130401C07|Flk-1|Flk1|Krd-1|Ly73|VEGFR-2|VEGFR2|sVEGFR-2 kinase insert domain protein receptor protein-coding common_peak2_506_4666_0.223668612718551_12.3001140583234_13.5083045983181 chr5 109555589 109559847 + 13.5083045983181 NA 5' UTR (NM_001310694, exon 2 of 8) 5' UTR (NM_001310694, exon 2 of 8) 1275 NM_016715 57914 Mm.35771 NM_016715 ENSMUSG00000033467 Crlf2 CRLM2|Ly114|Tpte2|Tslpr cytokine receptor-like factor 2 protein-coding common_peak1_23_33_1.92631262684176_6.05061915467122_13.5034895818962 chr2 30254493 30255033 + 13.5034895818962 NA intron (NM_177725, intron 2 of 3) B1_Mur1|SINE|Alu -11440 NM_001252568 227696 Mm.297949 NM_172267 ENSMUSG00000079484 Phyhd1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding common_peak1_88_956_-0.569356745721837_9.61769674162511_13.5032916065986 chr14 59200902 59201934 + 13.5032916065986 NA 5' UTR (NM_027764, exon 1 of 12) 5' UTR (NM_027764, exon 1 of 12) 190 NM_027764 71330 Mm.234195 NM_027764 ENSMUSG00000035469 Rcbtb1 5430409I18Rik|AW111883|CLLD7|CLLL7 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 protein-coding common_peak2_273_2034_0.332136788567608_11.1568814734374_13.5018667950522 chr6 28420747 28424637 + 13.5018667950522 NA promoter-TSS (NM_007480) promoter-TSS (NM_007480) -948 NM_007480 11844 Mm.389075 NM_007480 ENSMUSG00000020440 Arf5 - ADP-ribosylation factor 5 protein-coding common_peak2_97_1054_-0.539538735497507_9.77325791584579_13.5008086598473 chr17 56716280 56718523 + 13.5008086598473 NA promoter-TSS (NM_178926) promoter-TSS (NM_178926) 298 NM_001166474 106639 Mm.37290 NM_178926 ENSMUSG00000054723 Vmac AI662250 vimentin-type intermediate filament associated coiled-coil protein protein-coding common_peak2_153_902_0.484751674478565_10.0609580147201_13.5003912762585 chr14 120275063 120278457 + 13.5003912762585 NA intron (NM_175341, intron 1 of 8) intron (NM_175341, intron 1 of 8) 1091 NM_175341 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind-like 2 protein-coding common_peak2_41_465_-0.860099189669425_8.43413654981957_13.49926600975 chr13 98123541 98125381 + 13.49926600975 NA intron (NM_012026, intron 2 of 35) intron (NM_012026, intron 2 of 35) 81704 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding common_peak1_72_785_-0.636066475872978_9.30035226432212_13.4978176978765 chr5 138186906 138188042 + 13.4978176978765 NA promoter-TSS (NM_009315) promoter-TSS (NM_009315) -61 NM_178612 66455 Mm.24592 NM_178612 ENSMUSG00000036968 Cnpy4 2610019P18Rik canopy FGF signaling regulator 4 protein-coding common_peak1_86_934_-0.576024724109146_9.58081019272043_13.497652046472 chr10 53629305 53630077 + 13.497652046472 NA intron (NM_027830, intron 2 of 13) CpG 748 NM_027830 71567 Mm.278221 NM_027830 ENSMUSG00000058298 Mcm9 9030408O17Rik|Gm235|Mcmdc1 minichromosome maintenance 9 homologous recombination repair factor protein-coding common_peak1_86_934_-0.576024724109146_9.58081019272043_13.497652046472-2 chr5 33274730 33275550 + 13.497652046472 NA promoter-TSS (NM_001198860) promoter-TSS (NM_001198860) -136 NM_001198860 13016 Mm.7286 NM_013502 ENSMUSG00000037373 Ctbp1 BARS|CtBP3/BARS|D4S115h|D5H4S115|D5H4S115E C-terminal binding protein 1 protein-coding common_peak1_26_315_-1.08157318133751_7.76299415750835_13.4871834434395 chr2 33371144 33371492 + 13.4871834434395 NA 5' UTR (NM_175211, exon 1 of 20) 5' UTR (NM_175211, exon 1 of 20) 176 NM_001290570 241308 Mm.274249 NM_175211 ENSMUSG00000038831 Ralgps1 5830418G11Rik|AI853783|AI854138|RALGEF2|RALGPS1A|RalGEF 2|mKIAA0351 Ral GEF with PH domain and SH3 binding motif 1 protein-coding common_peak2_181_1147_0.434050427230716_10.381932140291_13.4869285225219 chr2 51972016 51973749 + 13.4869285225219 NA intron (NM_001141949, intron 1 of 8) CpG 326 NM_001141949 64685 Mm.7491 NM_019401 ENSMUSG00000026946 Nmi - N-myc (and STAT) interactor protein-coding common_peak1_35_81_1.37374566844094_7.04442483883855_13.4810950075222 chr15 73735624 73736471 + 13.4810950075222 NA intron (NM_001166388, intron 1 of 5) intron (NM_001166388, intron 1 of 5) 11117 NM_001166388 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak1_24_296_-1.12830392866438_7.65016715646857_13.4806475102572 chr19 41932776 41933288 + 13.4806475102572 NA promoter-TSS (NM_023740) promoter-TSS (NM_023740) 282 NM_001164561 66583 Mm.289086 NM_025644 ENSMUSG00000034321 Exosc1 2610035C18Rik|2610104C07Rik|2610312F07Rik|AI447561 exosome component 1 protein-coding common_peak2_83_902_-0.587882911309647_9.52464072182604_13.4796201929827 chr17 56324925 56326688 + 13.4796201929827 NA promoter-TSS (NM_172132) promoter-TSS (NM_172132) -244 NM_172132 193796 Mm.45047 NM_172132 ENSMUSG00000024201 Kdm4b 4732474L06Rik|Jmjd2b|mKIAA0876 lysine (K)-specific demethylase 4B protein-coding common_peak1_115_1253_-0.490433695916758_10.0471047848437_13.4770713998743 chr9 21616124 21617372 + 13.4770713998743 NA intron (NM_011417, intron 1 of 33) intron (NM_011417, intron 1 of 33) 579 NM_001174078 20586 Mm.286593 NM_011417 ENSMUSG00000032187 Smarca4 Brg1|HP1-BP72|SNF2beta|SW1/SNF|b2b508.1Clo|b2b692Clo SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding common_peak1_50_556_-0.773862740212575_8.73460214723374_13.4767158268025 chr7 19270306 19271006 + 13.4767158268025 NA intron (NR_104069, intron 1 of 10) intron (NR_104069, intron 1 of 10) 1198 NM_001282021 22323 Mm.9684 NM_009499 ENSMUSG00000030403 Vasp - vasodilator-stimulated phosphoprotein protein-coding common_peak2_50_556_-0.773862740212575_8.73460214723374_13.4767158268025 chr17 23673223 23674503 + 13.4767158268025 NA promoter-TSS (NM_001008425) promoter-TSS (NM_001008425) -93 NM_001008425 386612 Mm.328831 NM_001008425 ENSMUSG00000041319 Thoc6 F830014G06Rik|Wdr58 THO complex 6 protein-coding common_peak2_103_503_0.631365943513728_9.29296289525678_13.4752078965591 chr4 59625478 59627049 + 13.4752078965591 NA promoter-TSS (NM_153158) promoter-TSS (NM_153158) 52 NM_153158 230259 Mm.45688 NM_153158 ENSMUSG00000045071 E130308A19Rik - RIKEN cDNA E130308A19 gene protein-coding common_peak2_240_2735_-0.322001019631248_11.2568520050703_13.4749501655663 chr7 127875209 127877750 + 13.4749501655663 NA 5' UTR (NM_146259, exon 1 of 3) 5' UTR (NM_146259, exon 1 of 3) 344 NM_146259 244219 Mm.207872 NM_146259 ENSMUSG00000049728 Zfp668 BC030314|E130018B19Rik|Znf668 zinc finger protein 668 protein-coding common_peak1_29_345_-1.02597179503902_7.92164233011721_13.4746592409871 chr7 127293162 127293810 + 13.4746592409871 NA Intergenic B1_Mus1|SINE|Alu -2774 NM_001253873 16408 Mm.1618 NM_008400 ENSMUSG00000030830 Itgal (p180)|Cd11a|LFA-1|LFA-1A|Ly-15|Ly-21 integrin alpha L protein-coding common_peak1_34_394_-0.944263128540932_8.153577278794_13.4743837028971-2 chr13 97208088 97208782 + 13.4743837028971 NA Intergenic RMER10B|LTR|ERVL -10078 NM_010422 15212 Mm.27816 NM_010422 ENSMUSG00000021665 Hexb - hexosaminidase B protein-coding common_peak1_34_394_-0.944263128540932_8.153577278794_13.4743837028971 chr10 76237412 76237914 + 13.4743837028971 NA intron (NM_001077638, intron 1 of 10) intron (NM_001077638, intron 1 of 10) 202 NR_126571 15468 Mm.32020 NM_133182 ENSMUSG00000020230 Prmt2 AI504737|Hrmt1l1 protein arginine N-methyltransferase 2 protein-coding common_peak1_27_325_-1.06216340421315_7.8176464521245_13.474205835656 chr9 21250290 21250905 + 13.474205835656 NA Intergenic Intergenic -2154 NM_053190 94226 Mm.190619 NM_053190 ENSMUSG00000045087 S1pr5 Edg8|S1P5|lpB4 sphingosine-1-phosphate receptor 5 protein-coding common_peak2_161_971_0.468141890573454_10.1588834488925_13.4733511209994 chr4 86747777 86749885 + 13.4733511209994 NA 5' UTR (NM_184088, exon 1 of 32) 5' UTR (NM_184088, exon 1 of 32) 276 NM_184088 329877 Mm.273718 NM_184088 ENSMUSG00000038024 Dennd4c 1700065A05Rik|AA420392 DENN/MADD domain containing 4C protein-coding common_peak2_801_8518_0.167026921156564_13.1399818353496_13.4720711758129 chr2 9866194 9879777 + 13.4720711758129 NA intron (NM_008091, intron 3 of 5) intron (NM_008091, intron 3 of 5) 5615 NM_008091 14462 Mm.313866 NM_008091 ENSMUSG00000015619 Gata3 Gata-3|jal GATA binding protein 3 protein-coding common_peak2_247_2822_-0.316494275156318_11.3047662758715_13.4706121408067 chr3 69003948 69008003 + 13.4706121408067 NA intron (NM_133786, intron 1 of 23) CpG 1003 NM_133786 70099 Mm.206841 NM_133786 ENSMUSG00000034349 Smc4 2500002A22Rik|C79747|SMC-4|Smc4l1 structural maintenance of chromosomes 4 protein-coding common_peak1_28_335_-1.04365410826619_7.87049036864566_13.4703450171757 chr4 95215317 95215919 + 13.4703450171757 NA Intergenic IMPB_01|Satellite|Satellite -163396 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_57_627_-0.719345123192703_8.93494818729528_13.4702130918447 chr10 84621640 84623220 + 13.4702130918447 NA promoter-TSS (NM_027423) promoter-TSS (NM_027423) -7 NM_027423 70428 Mm.335007 NM_027423 ENSMUSG00000034453 Polr3b 2700078H01Rik|A330032P03Rik|C85372|RPC2 polymerase (RNA) III (DNA directed) polypeptide B protein-coding unique_peak2_48_535_-0.789212953547088_8.67148271368423_13.4688557392199 chr4 134468199 134470013 + 13.4688557392199 NA intron (NM_019641, intron 1 of 4) CpG 786 NM_019641 16765 Mm.378957 NM_019641 ENSMUSG00000028832 Stmn1 19k|Lag|Lap18|Op18|P18|P19|Pig|Pp17|Pp18|Pp19|Pr22|Smn stathmin 1 protein-coding common_peak2_94_1021_-0.54870969066241_9.72282463560642_13.4685223736937 chr9 60997807 60999896 + 13.4685223736937 NA Intergenic Intergenic -18218 NR_040767 330956 Mm.207985 NR_040767 ENSMUSG00000111290 Gm5122 A430102L10 predicted gene 5122 ncRNA common_peak1_481_4364_0.230697867924201_12.2071148724789_13.4676019769713 chr17 86960685 86964627 + 13.4676019769713 NA promoter-TSS (NM_145491) promoter-TSS (NM_145491) -455 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak1_12_179_-1.5630441628751_6.71033101489213_13.4633434252916 chr3 115758535 115758902 + 13.4633434252916 NA Intergenic LTR16A|LTR|ERVL -43663 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding common_peak2_208_1396_0.395629311115279_10.6459309609671_13.4599115052824 chr15 34081939 34084334 + 13.4599115052824 NA exon (NM_026002, exon 1 of 12) exon (NM_026002, exon 1 of 12) 417 NM_026002 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding unique_peak2_10_160_-1.69773144660702_6.48205115481111_13.4589746327259 chr11 58959724 58960597 + 13.4589746327259 NA Intergenic Intergenic -3621 NM_031172 56631 Mm.179733 NM_031172 ENSMUSG00000036964 Trim17 Rnf16|terf tripartite motif-containing 17 protein-coding common_peak1_45_130_1.13165011374242_7.59924805840866_13.4585434260319 chr8 88299481 88300358 + 13.4585434260319 NA intron (NM_001037724, intron 3 of 27) intron (NM_001037724, intron 3 of 27) 5715 NM_001037724 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding common_peak2_392_3322_0.262951200308125_11.8297461778461_13.4575310789897 chr5 114771301 114775964 + 13.4575310789897 NA promoter-TSS (NM_001077360) promoter-TSS (NM_001077360) -140 NM_001077359 26431 Mm.195632 NM_019834 ENSMUSG00000041890 Git2 1500036H07Rik|5830420E16Rik|6430510B20Rik|9630056M03Rik|B230104M05Rik|CAT2|mKIAA0148 G protein-coupled receptor kinase-interactor 2 protein-coding common_peak2_154_911_0.481897777447886_10.0738389028887_13.4572639604401 chr14 49171463 49173482 + 13.4572639604401 NA intron (NM_027492, intron 1 of 4) G-rich|Low_complexity|Low_complexity 226 NM_027492 70646 Mm.275688 NM_027492 ENSMUSG00000036282 Naa30 4930487N19Rik|5730533P17Rik|AI447922|AW322455|Nat12 N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding common_peak1_54_596_-0.74029610287889_8.85143906982536_13.4564055123469 chr11 96455315 96456371 + 13.4564055123469 NA intron (NR_033524, intron 2 of 2) intron (NR_033524, intron 2 of 2) 8704 NR_033524 100038600 Mm.483549 NR_033524 Gm11529 OTTMUSG00000001775 predicted gene 11529 ncRNA unique_peak2_13_189_-1.50990316949938_6.81490402358126_13.4535705355083 chrX 38635235 38635938 + 13.4535705355083 NA promoter-TSS (NM_021550) promoter-TSS (NM_021550) -443 NM_021550 59048 Mm.441410 NM_021550 ENSMUSG00000048970 C1galt1c1 1500002I11Rik|AB030184|C1GalT2|C81205|Cosmc C1GALT1-specific chaperone 1 protein-coding common_peak2_134_744_0.529216538368392_9.80570488453372_13.4532756285989 chr12 28634706 28636573 + 13.4532756285989 NA exon (NM_011300, exon 2 of 7) exon (NM_011300, exon 2 of 7) 314 NM_011300 20115 Mm.279839 NM_011300 ENSMUSG00000061477 Rps7 Mtu|Rps7A|S7 ribosomal protein S7 protein-coding common_peak2_81_347_0.745112080403054_8.81549953605026_13.4488789849453 chr2 6322155 6323391 + 13.4488789849453 NA promoter-TSS (NM_001080548) promoter-TSS (NM_001080548) 16 NM_001080548 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding common_peak2_78_327_0.764547086495233_8.7398255478657_13.4462027227473 chr8 117537023 117538598 + 13.4462027227473 NA intron (NM_172285, intron 2 of 32) intron (NM_172285, intron 2 of 32) 39519 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak2_159_1755_-0.407105968345514_10.5745241453626_13.4449937966235 chr14 20673478 20675417 + 13.4449937966235 NA intron (NM_172596, intron 1 of 22) CpG 126 NM_001168273 218811 Mm.173119 NM_172596 ENSMUSG00000039367 Sec24c 2610204K03Rik|mKIAA0079 Sec24 related gene family, member C (S. cerevisiae) protein-coding unique_peak1_17_15_2.50468536187267_5.25234268093633_13.4419234050351 chr13 44537126 44537573 + 13.4419234050351 NA Intergenic Intergenic 97622 NR_045489 69491 Mm.392410 NR_045489 ENSMUSG00000098144 1700029N11Rik - RIKEN cDNA 1700029N11 gene ncRNA common_peak1_83_361_0.730853379088005_8.86527257662721_13.4411240856269 chr2 23571309 23572298 + 13.4411240856269 NA intron (NM_001165997, intron 1 of 11) CpG 301 NM_029773 76857 Mm.276415 NM_029773 ENSMUSG00000026771 Spopl 4921517N04Rik|AU014935|BB233739|E430033K04Rik speckle-type POZ protein-like protein-coding common_peak1_174_1085_0.444742913597493_10.3071798446031_13.4383107013812 chr15 65786511 65788103 + 13.4383107013812 NA intron (NM_133766, intron 1 of 22) CpG 266 NM_133766 76740 Mm.260647 NM_133766 ENSMUSG00000015002 Efr3a A130089M23Rik|BB071175|C76891|C920006C10Rik|D030063F01Rik|mKIAA0143 EFR3 homolog A protein-coding unique_peak2_8_140_-1.86147830171248_6.20881220154255_13.4341513431025 chr8 123019859 123021306 + 13.4341513431025 NA intron (NR_037865, intron 1 of 13) intron (NR_037865, intron 1 of 13) 21702 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_89_966_-0.564581130725854_9.63508151411391_13.4310509336888 chr10 44820227 44822799 + 13.4310509336888 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -245701 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak1_103_1119_-0.520637149931323_9.8689644419793_13.4275042302476 chr19 5425067 5426215 + 13.4275042302476 NA promoter-TSS (NM_024176) promoter-TSS (NM_024176) 497 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak1_97_1053_-0.538170603540173_9.77257384986713_13.4274421271695 chr11 79657911 79659448 + 13.4274421271695 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) 16407 NR_045898 72218 Mm.443271 NR_045898 ENSMUSG00000086569 Rab11fip4os2 1700020F10Rik|4930542H20Rik|Rab11fib4os2 RAB11 family interacting protein 4 (class II), opposite strand 2 ncRNA common_peak2_60_214_0.916326601457512_8.20635615031822_13.4268969474824 chr3 98062868 98064238 + 13.4268969474824 NA intron (NM_010928, intron 2 of 33) intron (NM_010928, intron 2 of 33) 50015 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_277_3200_-0.295709869566624_11.4964520267623_13.4268250125869 chr13 23620216 23623397 + 13.4268250125869 NA promoter-TSS (NM_001177653) promoter-TSS (NM_001177653) -682 NM_178194 319179 Mm.440391 NM_178194 ENSMUSG00000047246 Hist1h2be - histone cluster 1, H2be protein-coding common_peak1_49_545_-0.780129637597112_8.7026923221213_13.4205174472738 chr11 75630094 75630878 + 13.4205174472738 NA promoter-TSS (NM_008916) promoter-TSS (NM_008916) -534 NM_008916 19062 Mm.1458 NM_008916 ENSMUSG00000006127 Inpp5k C62|Pps|SKIP inositol polyphosphate 5-phosphatase K protein-coding common_peak2_130_712_0.539328995402984_9.74742276414538_13.4175078241147 chr2 50295658 50297096 + 13.4175078241147 NA promoter-TSS (NR_040361) promoter-TSS (NR_040361) 300 NM_133839 109129 Mm.29214 NM_133839 ENSMUSG00000026766 Mmadhc 2010311D03Rik|AI314967|CblD methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria protein-coding common_peak2_50_157_1.04389002895035_7.82572576265228_13.4172367987845 chr14 67802956 67804139 + 13.4172367987845 NA intron (NM_177780, intron 25 of 51) B3|SINE|B2 56198 NR_105857 102465310 NR_105857 ENSMUSG00000098866 Mir6539 Gm27464|mir-6539|mmu-mir-6539 microRNA 6539 ncRNA common_peak2_39_444_-0.879914987036628_8.35770403233545_13.410620944479 chr19 8801602 8803244 + 13.410620944479 NA promoter-TSS (NM_001098237) promoter-TSS (NM_001098237) -73 NM_133759 75291 Mm.23423 NM_133759 ENSMUSG00000071661 Zbtb3 4930563M09Rik zinc finger and BTB domain containing 3 protein-coding common_peak2_313_3663_-0.275115842504936_11.7016458668445_13.4068599956118 chr12 111163805 111167914 + 13.4068599956118 NA promoter-TSS (NM_011632) promoter-TSS (NM_011632) -511 NM_001286122 22031 Mm.27431 NM_011632 ENSMUSG00000021277 Traf3 AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn TNF receptor-associated factor 3 protein-coding common_peak1_19_246_-1.2572330039539_7.31975072960773_13.4066949657036 chr15 27598725 27599072 + 13.4066949657036 NA Intergenic Intergenic 27404 NR_106065 102466808 NR_106065 ENSMUSG00000098416 Mir7117 Gm27729|mmu-mir-7117 microRNA 7117 ncRNA unique_peak2_9_149_-1.76429677405146_6.34667030347015_13.4039302791331-2 chr3 9461226 9462263 + 13.4039302791331 NA intron (NM_133218, intron 4 of 8) intron (NM_133218, intron 4 of 8) 58666 NR_015499 320088 Mm.212908 NR_015499 ENSMUSG00000097365 C030034L19Rik A130044O20Rik RIKEN cDNA C030034L19 gene ncRNA unique_peak2_9_149_-1.76429677405146_6.34667030347015_13.4039302791331 chr1 37614144 37615371 + 13.4039302791331 NA intron (NM_028096, intron 7 of 9) intron (NM_028096, intron 7 of 9) -73741 NM_173870 269181 Mm.25861 NM_173870 ENSMUSG00000026110 Mgat4a 9530018I07Rik|GnT-IVa|glcNAc-T-IVa mannoside acetylglucosaminyltransferase 4, isoenzyme A protein-coding unique_peak1_26_44_1.73035447050992_6.35703033158464_13.4039302791331 chr1 33757357 33757889 + 13.4039302791331 NA exon (NM_145392, exon 1 of 3) exon (NM_145392, exon 1 of 3) 127 NM_145392 213539 Mm.247037 NM_145392 ENSMUSG00000042215 Bag2 2610042A13Rik|BC016230 BCL2-associated athanogene 2 protein-coding common_peak1_118_1285_-0.481602557088303_10.0878736487838_13.4030880164001 chr19 11055289 11056993 + 13.4030880164001 NA Intergenic Lx|LINE|L1 -5575 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA common_peak2_78_847_-0.605821363449882_9.42500977283826_13.4023168272933 chr8 54419191 54421792 + 13.4023168272933 NA Intergenic Intergenic 109507 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak1_36_414_-0.917183875022877_8.23837558872285_13.4005887545471 chr11 49810280 49811124 + 13.4005887545471 NA intron (NM_013529, intron 4 of 18) B2_Mm1a|SINE|B2 16547 NM_013529 14584 Mm.24402 NM_013529 ENSMUSG00000020363 Gfpt2 AI480523|GFAT2 glutamine fructose-6-phosphate transaminase 2 protein-coding common_peak2_61_220_0.905391956529231_8.24059853765605_13.400588754547 chr12 103433516 103434873 + 13.400588754547 NA promoter-TSS (NM_026790) promoter-TSS (NM_026790) 5 NM_194069 52668 Mm.2121 NM_026790 ENSMUSG00000064215 Ifi27 1110013J02Rik|2900026P10Rik|D12Ertd647e|ISG12a|Ifi27l1 interferon, alpha-inducible protein 27 protein-coding common_peak2_61_220_0.905391956529231_8.24059853765605_13.400588754547-2 chr5 100673540 100675045 + 13.400588754547 NA promoter-TSS (NM_027978) promoter-TSS (NM_027978) -36 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding common_peak2_133_1454_-0.449647426459567_10.2819797245659_13.3978145100711 chr7 12977240 12979268 + 13.3978145100711 NA intron (NM_001168561, intron 1 of 4) CpG 406 NM_001168561 269870 Mm.62083 NM_175558 ENSMUSG00000033961 Zfp446 A630035I11Rik|A930031C22|AA120513|AV306632 zinc finger protein 446 protein-coding common_peak1_79_858_-0.602155471134974_9.44543658557098_13.3957120835319 chr13 98890017 98891224 + 13.3957120835319 NA intron (NM_178716, intron 2 of 23) (CGG)n|Simple_repeat|Simple_repeat 422 NM_001048267 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak2_79_858_-0.602155471134974_9.44543658557098_13.3957120835319 chr7 5037851 5039034 + 13.3957120835319 NA promoter-TSS (NM_001039532) promoter-TSS (NM_001039532) 4 NM_001039532 654801 Mm.333548 NM_001039532 ENSMUSG00000043290 Zfp784 C730049F21Rik|Znf784 zinc finger protein 784 protein-coding common_peak1_135_753_0.524952481264577_9.82089695390095_13.3950030773541 chr11 20542811 20544091 + 13.3950030773541 NA 5' UTR (NM_021372, exon 1 of 2) 5' UTR (NM_021372, exon 1 of 2) 198 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding common_peak1_34_77_1.39604349566129_6.98342396669289_13.3905675815576 chr7 90308478 90309217 + 13.3905675815576 NA intron (NM_001289583, intron 1 of 19) intron (NM_001289583, intron 1 of 19) 6492 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_41_464_-0.85699995101054_8.43258693049012_13.3894866802933 chr10 98774347 98775225 + 13.3894866802933 NA Intergenic Intergenic -140366 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_24_37_1.8380876786928_6.16697135278998_13.3819987330795 chr9 95120994 95121479 + 13.3819987330795 NA intron (NM_177909, intron 12 of 15) intron (NM_177909, intron 12 of 15) 286034 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak2_208_2339_-0.348547197946024_11.0180192154978_13.3811394713805 chr15 81871103 81873286 + 13.3811394713805 NA promoter-TSS (NM_026737) promoter-TSS (NM_026737) -269 NM_080633 11429 Mm.154581 NM_080633 ENSMUSG00000022477 Aco2 Aco-2|Aco3|D10Wsu183e aconitase 2, mitochondrial protein-coding common_peak1_113_1229_-0.493331569490071_10.0177768154816_13.3763766076029 chr7 28741008 28742482 + 13.3763766076029 NA promoter-TSS (NM_023637) promoter-TSS (NM_023637) 36 NM_011885 24030 Mm.358650 NM_011885 ENSMUSG00000045948 Mrps12 AI327385|Rpms12|rps12 mitochondrial ribosomal protein S12 protein-coding common_peak1_50_555_-0.77127029559605_8.73330592492548_13.3762241198502 chr9 85119710 85120842 + 13.3762241198502 NA Intergenic ID_B1|SINE|B4 206848 NM_001160378 212943 Mm.74610 NM_001160378 ENSMUSG00000032265 Fam46a BAP014|D930050G01Rik family with sequence similarity 46, member A protein-coding common_peak1_92_998_-0.553524146904827_9.68757879434_13.3757373171077 chr9 40801107 40802114 + 13.3757373171077 NA intron (NM_031165, intron 1 of 8) CpG 337 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding common_peak2_156_929_0.476388728410255_10.0992812702005_13.3738366514209 chr3 52069093 52070967 + 13.3738366514209 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 34976 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like 3 (Drosophila) protein-coding common_peak1_134_745_0.527281333462678_9.80667248698658_13.3662182392475 chr13 73327850 73329343 + 13.3662182392475 NA promoter-TSS (NM_010888) promoter-TSS (NM_010888) -114 NM_010888 407785 Mm.29897 NM_010888 ENSMUSG00000021606 Ndufs6 BC059730|IP13 NADH dehydrogenase (ubiquinone) Fe-S protein 6 protein-coding common_peak1_67_731_-0.65893895493716_9.18623036081546_13.3651735332153 chr10 34172505 34173706 + 13.3651735332153 NA intron (NM_172508, intron 2 of 5) intron (NM_172508, intron 2 of 5) 34446 NM_172508 212898 Mm.34557 NM_172508 ENSMUSG00000039497 Dse 6030499O08|AI480506|B130024B19Rik|DS-epi1|Sart2 dermatan sulfate epimerase protein-coding common_peak1_90_976_-0.559869709248337_9.65227989734421_13.3607793619363 chr6 72361879 72363199 + 13.3607793619363 NA promoter-TSS (NM_025607) promoter-TSS (NM_025607) -158 NM_025607 66510 Mm.170023 NM_025607 ENSMUSG00000055850 Rnf181 1700047F16Rik|2500002L14Rik|6230415N01Rik|C77350 ring finger protein 181 protein-coding common_peak1_411_3542_0.254016756031138_11.9177641281339_13.3598371917317 chr5 137745529 137749915 + 13.3598371917317 NA exon (NM_029805, exon 2 of 6) exon (NM_029805, exon 2 of 6) 1753 NM_023910 78829 Mm.286399 NM_023910 ENSMUSG00000029723 Tsc22d4 0610009M14Rik|1700023B23Rik|AI415410|Thg-1pit|Tilz2 TSC22 domain family, member 4 protein-coding common_peak1_63_232_0.8852917408436_8.30683201507608_13.3595465100489-2 chr7 19011549 19012816 + 13.3595465100489 NA Intergenic CpG 8117 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding common_peak1_63_232_0.8852917408436_8.30683201507608_13.3595465100489 chr5 93268475 93269071 + 13.3595465100489 NA intron (NM_007635, intron 2 of 7) intron (NM_007635, intron 2 of 7) 1200 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding common_peak2_34_393_-0.940606104932842_8.15174876698995_13.3554731916275 chr2 34789912 34791305 + 13.3554731916275 NA exon (NM_145522, exon 4 of 8) exon (NM_145522, exon 4 of 8) 9304 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding common_peak2_166_1016_0.456642641830459_10.2184252847727_13.3553747760137 chr11 118399883 118403027 + 13.3553747760137 NA intron (NM_011150, intron 1 of 5) intron (NM_011150, intron 1 of 5) 476 NM_011150 19039 Mm.3152 NM_011150 ENSMUSG00000033880 Lgals3bp 90K|CyCAP|MAC-2BP|Ppicap|Tango10b lectin, galactoside-binding, soluble, 3 binding protein protein-coding common_peak1_197_1295_0.408216772115896_10.5439583889426_13.3534865282625 chr12 69536908 69539106 + 13.3534865282625 NA Intergenic Intergenic 45021 NM_001033236 207965 Mm.102487 NM_001033236 ENSMUSG00000049882 Vcpkmt Gm71|Mettl21d|Mettl221d|VCP-KMT valosin containing protein lysine (K) methyltransferase protein-coding common_peak1_107_534_0.612037107923797_9.36941363525041_13.3523307389637 chr9 63377069 63378310 + 13.3523307389637 NA 5' UTR (NM_011840, exon 1 of 22) 5' UTR (NM_011840, exon 1 of 22) 163 NM_011840 23938 Mm.325746 NM_011840 ENSMUSG00000058444 Map2k5 AI324775|AI428457|MEK5|Mapkk5|Prkmk5 mitogen-activated protein kinase kinase 5 protein-coding common_peak1_37_91_1.30341455852623_7.17526923532013_13.3473807458188 chr18 80701255 80702091 + 13.3473807458188 NA intron (NM_198429, intron 1 of 9) intron (NM_198429, intron 1 of 9) 6500 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_85_375_0.717750629762667_8.91346416655897_13.3458149368663 chr7 126287716 126289300 + 13.3458149368663 NA intron (NM_145587, intron 1 of 3) intron (NM_145587, intron 1 of 3) 15889 NM_145587 104175 Mm.29660 NM_145587 ENSMUSG00000042978 Sbk1 Sbk SH3-binding kinase 1 protein-coding common_peak1_87_943_-0.569620684295177_9.59783270721425_13.3452616696857 chr12 82215061 82216518 + 13.3452616696857 NA intron (NM_001167983, intron 1 of 23) Lx|LINE|L1 45773 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak2_106_526_0.617311267718559_9.35031478549649_13.3440484817201 chr12 64917020 64918745 + 13.3440484817201 NA promoter-TSS (NM_001025605) promoter-TSS (NM_001025605) -29 NM_001025605 217648 Mm.341586 NM_001025605 ENSMUSG00000047227 Gm527 - predicted gene 527 protein-coding common_peak1_51_163_1.0244815512092_7.86979278022269_13.3417120731042 chr12 100976042 100977155 + 13.3417120731042 NA intron (NM_026681, intron 4 of 29) intron (NM_026681, intron 4 of 29) 45170 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak2_216_1473_0.384697504904706_10.7178695615474_13.3415489061698 chr12 72760304 72762642 + 13.3415489061698 NA 5' UTR (NM_008910, exon 1 of 6) 5' UTR (NM_008910, exon 1 of 6) 262 NM_008910 19042 Mm.261045 NM_008910 ENSMUSG00000021096 Ppm1a 2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1 protein phosphatase 1A, magnesium dependent, alpha isoform protein-coding common_peak1_46_514_-0.805297534644563_8.6057798547483_13.3364803806264 chr13 53065349 53065818 + 13.3364803806264 NA Intergenic URR1B|DNA|hAT-Charlie -84544 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_73_295_0.796942596768817_8.60792466401336_13.3364803806264 chr17 28256802 28257934 + 13.3364803806264 NA intron (NM_011145, intron 2 of 7) intron (NM_011145, intron 2 of 7) -14340 NR_045427 69050 Mm.486938 NR_045427 ENSMUSG00000002250 1810013A23Rik - RIKEN cDNA 1810013A23 gene ncRNA common_peak2_572_5490_0.205652826195816_12.5256796090422_13.3343576012169 chr3 137861840 137868756 + 13.3343576012169 NA intron (NM_001316995, intron 2 of 4) CpG-9623 811 NM_016750 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak2_75_308_0.782125797865229_8.66252592683699_13.3277225988616 chr7 43671352 43672654 + 13.3277225988616 NA promoter-TSS (NM_145582) promoter-TSS (NM_145582) -28 NM_145582 233189 Mm.26514 NM_145582 ENSMUSG00000038888 Ctu1 Atpbd3|BC005752 cytosolic thiouridylase subunit 1 protein-coding common_peak2_165_1823_-0.396771833810037_10.6345040972597_13.3274635676841 chr7 101300713 101302958 + 13.3274635676841 NA intron (NM_001111111, intron 1 of 17) CpG 253 NM_001111111 73683 Mm.275744 NM_001111111 ENSMUSG00000047767 Atg16l2 2410118P20Rik autophagy related 16-like 2 (S. cerevisiae) protein-coding common_peak2_52_168_1.01486232916093_7.90831060086265_13.3271491456071 chr2 68782175 68783116 + 13.3271491456071 NA Intergenic Intergenic -78912 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_308_2402_0.305061466800156_11.3831516665299_13.3229433274166 chr3 108910139 108912504 + 13.3229433274166 NA exon (NM_025845, exon 1 of 6) exon (NM_025845, exon 1 of 6) 383 NM_025845 66921 Mm.51049 NM_025845 ENSMUSG00000027881 Prpf38b 1110021E09Rik|AU018955 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B protein-coding common_peak2_217_2447_-0.339033295976659_11.0878711947043_13.3211302302701 chr3 96267445 96270544 + 13.3211302302701 NA promoter-TSS (NM_175666) promoter-TSS (NM_175666) 340 NM_178215 319154 Mm.383293 NM_178215 ENSMUSG00000074403 Hist2h3b H3-615|H3-616 histone cluster 2, H3b protein-coding common_peak2_182_1158_0.429989116193784_10.3936594091034_13.3193962313106 chr3 79285800 79287944 + 13.3193962313106 NA Intergenic CpG -58504 NM_001142953 100233207 Mm.373801 NM_001142953 ENSMUSG00000091685 Gm17359 - predicted gene, 17359 protein-coding common_peak2_82_355_0.733772438201949_8.84261965006737_13.3185214878809 chr4 141663140 141664801 + 13.3185214878809 NA 5' UTR (NM_001033150, exon 1 of 20) 5' UTR (NM_001033150, exon 1 of 20) 145 NM_001033150 69582 Mm.33220 NM_001033150 ENSMUSG00000028917 Plekhm2 2310034J19Rik|AI854247|mKIAA0842 pleckstrin homology domain containing, family M (with RUN domain) member 2 protein-coding common_peak1_33_383_-0.954813928560629_8.10755553644084_13.3179626594205 chr18 67249085 67249743 + 13.3179626594205 NA Intergenic ORR1E|LTR|ERVL-MaLR -3584 NM_172630 225651 Mm.235792 NM_172630 ENSMUSG00000062526 Mppe1 A530095G11 metallophosphoesterase 1 protein-coding common_peak2_201_2253_-0.35481129538041_10.960866152482_13.315768305664 chr9 75432914 75436733 + 13.315768305664 NA Intergenic Intergenic -6701 NM_001039522 235497 Mm.41508 NM_001006122 ENSMUSG00000042487 Leo1 Gm185 Leo1, Paf1/RNA polymerase II complex component protein-coding common_peak1_33_73_1.42069520653158_6.91980096889474_13.3077574542154 chr14 72777401 72778073 + 13.3077574542154 NA Intergenic Intergenic -67734 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding common_peak1_342_2768_0.285263007809226_11.5777808422715_13.305616880419 chr1 171232108 171235000 + 13.305616880419 NA intron (NM_010185, intron 1 of 4) intron (NM_010185, intron 1 of 4) 795 NM_010185 14127 Mm.22673 NM_010185 ENSMUSG00000058715 Fcer1g AI573376|CD23|FcR-gamma|FcR[g]|FcRgamma|Fce1g|FcepsilonRI|Ly-50 Fc receptor, IgE, high affinity I, gamma polypeptide protein-coding common_peak2_64_239_0.870023924724378_8.34190255797071_13.3046573268708 chr2 52072477 52073663 + 13.3046573268708 NA intron (NM_175238, intron 1 of 35) CpG 233 NM_175238 51869 Mm.254530 NM_175238 ENSMUSG00000036202 Rif1 5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e replication timing regulatory factor 1 protein-coding common_peak2_180_1141_0.431860380113518_10.3732771254196_13.3038343439422 chr16 4789146 4791359 + 13.3038343439422 NA promoter-TSS (NM_025670) promoter-TSS (NM_025670) -317 NM_025670 66626 Mm.157648 NM_025670 ENSMUSG00000004071 Cdip1 2700048O17Rik|5730403B10Rik|AU018521|AW742692|CDIP cell death inducing Trp53 target 1 protein-coding common_peak1_194_1268_0.411572682645074_10.5152626951636_13.3032989987024 chr17 29093750 29095252 + 13.3032989987024 NA intron (NM_007669, intron 1 of 2) CpG 732 NM_007669 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding common_peak1_47_141_1.09064065977377_7.69506744939157_13.302459015456 chr5 21045819 21046990 + 13.302459015456 NA intron (NM_011203, intron 1 of 17) intron (NM_011203, intron 1 of 17) 9393 NM_011203 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak1_25_41_1.76310382186217_6.27386933370985_13.3012612470948 chr14 64728395 64728887 + 13.3012612470948 NA intron (NM_001081177, intron 10 of 39) MTB_Mm|LTR|ERVL-MaLR 76110 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak1_187_1204_0.421538278681407_10.445586570458_13.3004397104399 chr19 47089902 47091342 + 13.3004397104399 NA promoter-TSS (NM_023211) promoter-TSS (NM_023211) 3 NM_023211 66477 Mm.29722 NM_023211 ENSMUSG00000071528 Usmg5 2010301L15Rik upregulated during skeletal muscle growth 5 protein-coding common_peak1_39_443_-0.876669327532973_8.35608120258362_13.2987048372637-2 chr16 52126034 52126914 + 13.2987048372637 NA intron (NM_001033238, intron 4 of 17) intron (NM_001033238, intron 4 of 17) 94925 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_39_443_-0.876669327532973_8.35608120258362_13.2987048372637 chr14 57571668 57572231 + 13.2987048372637 NA promoter-TSS (NM_026526) promoter-TSS (NM_026526) -380 NM_026526 68043 Mm.45225 NM_026526 ENSMUSG00000021951 Eef1akmt1 2510005D08Rik|AW045965|Ayu21-96|Gt(pU21)96Imeg|GtAyu21-96|N6amt2 eukaryotic translation elongation factor 1 alpha lysine methyltransferase 1 protein-coding common_peak1_21_265_-1.19548469280724_7.45754008909757_13.2983259548065 chr11 59808783 59809288 + 13.2983259548065 NA intron (NM_001271356, intron 1 of 12) intron (NM_001271356, intron 1 of 12) 566 NM_001271357 216805 Mm.339640 NM_146018 ENSMUSG00000032633 Flcn AU014660|B430214A04Rik|Bhd|FLCL folliculin protein-coding common_peak1_77_322_0.764165406100293_8.71747305774407_13.2971509964751 chr5 143622220 143623175 + 13.2971509964751 NA intron (NM_011182, intron 1 of 12) CpG 250 NM_011182 19159 Mm.281003 NM_011182 ENSMUSG00000018001 Cyth3 AI648983|ARNO3|CLM3|Grp1|Pscd3 cytohesin 3 protein-coding common_peak1_53_584_-0.743472936444816_8.82055634624836_13.2936190570689 chr11 70651624 70652562 + 13.2936190570689 NA TTS (NM_001316728) TTS (NM_001316728) 2557 NM_011072 18643 Mm.2647 NM_011072 ENSMUSG00000018293 Pfn1 Pfn profilin 1 protein-coding common_peak1_65_245_0.861417753507997_8.37322338209324_13.293523140349 chr5 113137456 113138842 + 13.293523140349 NA intron (NM_172884, intron 1 of 7) CpG 25164 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak2_863_9389_0.158359680230237_13.2760892826563_13.292886893641 chr9 56416237 56425810 + 13.292886893641 NA intron (NM_025812, intron 1 of 9) B1_Mur1|SINE|Alu 2177 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_12_178_-1.55500684380968_6.70631235535942_13.2899809793904 chr10 99194365 99194747 + 13.2899809793904 NA intron (NM_027740, intron 11 of 11) intron (NM_027740, intron 11 of 11) -68675 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak2_227_1580_0.371101689564517_10.8121724971406_13.2892458698359 chr6 88901237 88903986 + 13.2892458698359 NA intron (NM_011906, intron 1 of 11) CpG 360 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding unique_peak2_3_88_-2.63270479021394_5.15938103585943_13.2891396823847 chr5 3300813 3301459 + 13.2891396823847 NA Intergenic Intergenic -42757 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak1_66_251_0.853263776649807_8.40391181182482_13.2853775625879 chr4 63594242 63595288 + 13.2853775625879 NA Intergenic Intergenic 5999 NR_028584 670833 Mm.32213 NR_028583 ENSMUSG00000084782 Gm11213 OTTMUSG00000000252 predicted gene 11213 ncRNA common_peak1_56_191_0.959536218829017_8.06473061013567_13.2853003125007 chr1 9797937 9798673 + 13.2853003125007 NA intron (NM_177547, intron 1 of 16) CpG 175 NM_177547 170755 Mm.336410 NM_133220 ENSMUSG00000025915 Sgk3 2510015P22Rik|A330005P07Rik|Cisk|fy|fz serum/glucocorticoid regulated kinase 3 protein-coding unique_peak1_20_24_2.13361845402377_5.71066541678661_13.2852716022366-2 chr5 104433978 104434429 + 13.2852716022366 NA promoter-TSS (NM_001204202) promoter-TSS (NM_001204202) -908 NM_001204202 20750 Mm.288474 NM_009263 ENSMUSG00000029304 Spp1 2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1 secreted phosphoprotein 1 protein-coding unique_peak1_20_24_2.13361845402377_5.71066541678661_13.2852716022366 chr14 34502641 34503095 + 13.2852716022366 NA promoter-TSS (NM_009758) promoter-TSS (NM_009758) -322 NM_009758 12166 Mm.237825 NM_009758 ENSMUSG00000021796 Bmpr1a 1110037I22Rik|ALK3|AU045487|BMPR-IA|Bmpr bone morphogenetic protein receptor, type 1A protein-coding common_peak1_190_1232_0.416414421583955_10.4761642951948_13.2779587130197 chr2 153741216 153742360 + 13.2779587130197 NA intron (NM_007896, intron 1 of 6) MIR|SINE|MIR 501 NM_007896 13589 Mm.143877 NM_007896 ENSMUSG00000027479 Mapre1 5530600P05Rik|AI462499|AI504412|AW260097|BIM1p|D2Ertd459e|Eb1 microtubule-associated protein, RP/EB family, member 1 protein-coding unique_peak2_1_67_-3.47104651168424_4.35193958540822_13.2695701735986 chr11 99024358 99024882 + 13.2695701735986 NA promoter-TSS (NM_011623) promoter-TSS (NM_011623) -431 NM_011623 21973 Mm.4237 NM_011623 ENSMUSG00000020914 Top2a Top-2 topoisomerase (DNA) II alpha protein-coding unique_peak1_13_6_3.25259751677397_4.43365368044459_13.2695701735986 chr9 7857714 7858108 + 13.2695701735986 NA intron (NM_007464, intron 4 of 8) intron (NM_007464, intron 4 of 8) 15259 NM_007464 11796 Mm.2026 NM_007464 ENSMUSG00000032000 Birc3 AW107670|Api1|Api2|Birc2|C-IAP2|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF49|cIAP-1|cIAP-2|cIAP1|cIAP2 baculoviral IAP repeat-containing 3 protein-coding common_peak1_150_1647_-0.417980142197667_10.4775104560844_13.2688840364679 chr7 73606920 73609298 + 13.2688840364679 NA Intergenic (GAAAA)n|Simple_repeat|Simple_repeat -49714 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak2_186_1195_0.422915999903919_10.4354596741501_13.2661479957915 chr4 35224847 35226844 + 13.2661479957915 NA promoter-TSS (NM_001081343) promoter-TSS (NM_001081343) 35 NM_001081343 73205 Mm.331544 NM_001081343 ENSMUSG00000028300 3110043O21Rik AI840585 RIKEN cDNA 3110043O21 gene protein-coding common_peak2_53_174_0.997608766193622_7.95001549492914_13.2649776602678 chr11 51832409 51833854 + 13.2649776602678 NA intron (NM_199299, intron 4 of 11) intron (NM_199299, intron 4 of 11) 24350 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak1_16_217_-1.36464806380275_7.08586029287555_13.2623628439726 chr4 147868132 147868512 + 13.2623628439726 NA promoter-TSS (NM_010244) promoter-TSS (NM_010244) 397 NM_001025365 28010 Mm.250504 NM_133873 ENSMUSG00000029022 Miip AA553001|AI853621|D4Wsu114e|IIP45 migration and invasion inhibitory protein protein-coding unique_peak1_21_27_2.05244282063635_5.83357633237578_13.2592144007247 chr7 122305296 122305758 + 13.2592144007247 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 16402 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak1_45_131_1.12067899592141_7.60473361731916_13.2545264948042 chr11 74835097 74835982 + 13.2545264948042 NA intron (NM_010813, intron 1 of 5) intron (NM_010813, intron 1 of 5) 4615 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding unique_peak1_18_18_2.35243668995331_5.42414585842024_13.2509911720417 chr10 122813674 122814099 + 13.2509911720417 NA intron (NM_176919, intron 4 of 8) intron (NM_176919, intron 4 of 8) 134571 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA unique_peak1_18_18_2.35243668995331_5.42414585842024_13.2509911720417-2 chr3 144714907 144715429 + 13.2509911720417 NA intron (NM_001282037, intron 1 of 10) intron (NM_001282037, intron 1 of 10) 5167 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak2_73_792_-0.624781093306213_9.31878650905087_13.2498022328678 chr11 94653399 94654558 + 13.2498022328678 NA promoter-TSS (NM_177752) promoter-TSS (NM_177752) 187 NM_053161 94064 Mm.34951 NM_053161 ENSMUSG00000024414 Mrpl27 A630055F16Rik|D11Moh47|D18Ertd643e mitochondrial ribosomal protein L27 protein-coding common_peak2_23_284_-1.14104264096001_7.5842967885721_13.2475280727564 chr7 44900960 44902077 + 13.2475280727564 NA TTS (NM_027376) TTS (NM_027376) 5439 NM_027376 70300 Mm.276298 NM_027376 ENSMUSG00000011658 Fuz 2600013E07Rik|b2b1273Clo fuzzy planar cell polarity protein protein-coding common_peak1_381_3203_0.26532538476444_11.7783211247909_13.2454122575515 chr4 134127714 134129916 + 13.2454122575515 NA promoter-TSS (NM_080559) promoter-TSS (NM_080559) -62 NM_080559 73723 Mm.22240 NM_080559 ENSMUSG00000028843 Sh3bgrl3 1110004L05Rik|AU022188 SH3 domain binding glutamic acid-rich protein-like 3 protein-coding common_peak2_120_1305_-0.474372336910983_10.1137530130909_13.2445750931574 chr17 35234612 35236847 + 13.2445750931574 NA promoter-TSS (NM_023179) promoter-TSS (NM_023179) 86 NM_010909 18038 Mm.300795 NM_010909 ENSMUSG00000042419 Nfkbil1 Def-7|IKBL nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 protein-coding common_peak2_57_197_0.945919005619316_8.10231612288927_13.244339168624 chr13 108158014 108159196 + 13.244339168624 NA promoter-TSS (NM_028042) promoter-TSS (NM_028042) 20 NM_001127346 75597 Mm.276040 NM_001127346 ENSMUSG00000068184 Ndufaf2 1810058I14Rik|C86051|Ndufa12l|mimitin NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2 protein-coding common_peak2_82_888_-0.586533739661421_9.50277273899906_13.243248785186 chr4 132534958 132536547 + 13.243248785186 NA promoter-TSS (NM_007512) promoter-TSS (NM_007512) 193 NM_172400 68598 Mm.29685 NM_172400 ENSMUSG00000054405 Dnajc8 1110021D09Rik|2010009J04Rik|AL024084|AU019262|AU044514 DnaJ heat shock protein family (Hsp40) member C8 protein-coding common_peak1_82_888_-0.586533739661421_9.50277273899906_13.243248785186 chr5 134551747 134552976 + 13.243248785186 NA promoter-TSS (NM_009990) promoter-TSS (NM_009990) 73 NM_001039162 269713 Mm.255138 NM_009990 ENSMUSG00000063146 Clip2 B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4 CAP-GLY domain containing linker protein 2 protein-coding common_peak1_67_258_0.839952595660328_8.43678458551672_13.243057335757 chr11 54774139 54775391 + 13.243057335757 NA intron (NM_178626, intron 1 of 5) intron (NM_178626, intron 1 of 5) 12938 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding common_peak2_88_397_0.696393748220538_8.98482149465392_13.2419694422641 chr10 59221095 59222578 + 13.2419694422641 NA promoter-TSS (NM_001024911) promoter-TSS (NM_001024911) 11 NM_001024911 103080 Mm.346842 NM_001024910 ENSMUSG00000019917 Sept10 4921515A04Rik|9430099J10Rik|AA408298|AI874685 septin 10 protein-coding common_peak2_433_3800_0.244667315324167_12.014496967524_13.241498434915 chr17 48407368 48411359 + 13.241498434915 NA promoter-TSS (NM_001289490) promoter-TSS (NM_001289490) 457 NM_001110832 18044 Mm.4929 NM_010913 ENSMUSG00000023994 Nfya AA407810|Cbf-b|SEZ-10|SEZ10 nuclear transcription factor-Y alpha protein-coding common_peak1_345_2803_0.282552208668283_11.5945467383448_13.239570189965 chr9 25150828 25152708 + 13.239570189965 NA promoter-TSS (NM_020586) promoter-TSS (NM_020586) 13 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding common_peak2_291_2225_0.31530577141638_11.2778907630502_13.2393173787889 chr2 101754675 101758632 + 13.2393173787889 NA intron (NM_175181, intron 4 of 8) intron (NM_175181, intron 4 of 8) 41054 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_36_87_1.32035203257411_7.11960763492435_13.2369221517152 chr6 87152862 87153516 + 13.2369221517152 NA intron (NM_054041, intron 17 of 17) ORR1F|LTR|ERVL-MaLR 48443 NM_001167937 52372 Mm.282851 NM_001167937 ENSMUSG00000090891 D6Ertd527e AU043841 DNA segment, Chr 6, ERATO Doi 527, expressed protein-coding common_peak1_51_564_-0.760073501475262_8.76207030656492_13.2365503363475 chr13 21782822 21783613 + 13.2365503363475 NA exon (NM_178207, exon 1 of 1) exon (NM_178207, exon 1 of 1) 180 NM_178207 319153 Mm.390558 NM_178207 ENSMUSG00000101972 Hist1h3i H3-H histone cluster 1, H3i protein-coding common_peak2_30_353_-1.00092334534869_7.96714387740865_13.2364559570971 chr9 22002849 22003797 + 13.2364559570971 NA promoter-TSS (NM_029939) promoter-TSS (NM_029939) 335 NM_008925 19089 Mm.214593 NM_008925 ENSMUSG00000003402 Prkcsh 80K-H|PKCSH protein kinase C substrate 80K-H protein-coding common_peak2_127_690_0.543548296295977_9.70431604853625_13.2353956805437 chr7 90382592 90385373 + 13.2353956805437 NA intron (NM_001289583, intron 8 of 19) intron (NM_001289583, intron 8 of 19) -2999 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_93_1007_-0.547536524887541_9.70351166105615_13.2353956805437 chr15 78922724 78923756 + 13.2353956805437 NA Intergenic Intergenic -3485 NM_008495 16852 Mm.43831 NM_008495 ENSMUSG00000068220 Lgals1 AA410090|Gal-1|Galbp|L-14.5|L14|Lect14|galectin-1 lectin, galactose binding, soluble 1 protein-coding common_peak1_58_636_-0.709623157214475_8.96033798364906_13.2345356836661 chr15 81514398 81515212 + 13.2345356836661 NA Intergenic Intergenic 48489 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak2_79_856_-0.598792544109012_9.44375512205799_13.2341003741414 chr5 113985419 113987923 + 13.2341003741414 NA intron (NM_198109, intron 2 of 14) intron (NM_198109, intron 2 of 14) 7086 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot homolog 1 (Drosophila) protein-coding common_peak2_770_8101_0.169673795623524_13.0688992674982_13.2276202721874 chr2 93456010 93463013 + 13.2276202721874 NA intron (NR_040532, intron 2 of 4) intron (NR_040532, intron 2 of 4) 2340 NM_001271461 12521 Mm.4261 NM_007656 ENSMUSG00000027215 Cd82 AA682076|AL023070|C33|IA4|Kai1|Tspan27 CD82 antigen protein-coding common_peak2_529_4956_0.215208120037463_12.3828556034891_13.2243227363665 chr6 113656715 113664688 + 13.2243227363665 NA intron (NM_001113553, intron 2 of 11) ORR1D2|LTR|ERVL-MaLR 22234 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding common_peak1_26_313_-1.07241318205203_7.75841415786561_13.2224269309604 chr7 72313598 72314078 + 13.2224269309604 NA Intergenic Intergenic -7243 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak1_26_313_-1.07241318205203_7.75841415786561_13.2224269309604-2 chr8 71285837 71286501 + 13.2224269309604 NA intron (NM_001142323, intron 1 of 38) intron (NM_001142323, intron 1 of 38) 13455 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding common_peak1_62_227_0.888719145787041_8.27724958705826_13.2224128468133 chr4 63383446 63384529 + 13.2224128468133 NA intron (NM_001305432, intron 5 of 20) intron (NM_001305432, intron 5 of 20) 14253 NM_001305432 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak1_98_1061_-0.531113586989989_9.78701125730916_13.2219458873904 chr7 128049874 128050918 + 13.2219458873904 NA Intergenic RMER10A|LTR|ERVL -12244 NM_001082960 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak2_155_1705_-0.410233859337717_10.5312850016494_13.2202910309756 chr19 6979125 6981543 + 13.2202910309756 NA intron (NM_008020, intron 1 of 5) CpG 106 NM_008020 14227 Mm.4234 NM_008020 ENSMUSG00000056629 Fkbp2 13kDa|FKBP-2|mFKBP13|mFKBP2 FK506 binding protein 2 protein-coding common_peak1_125_1361_-0.463289516873933_10.1798662295751_13.2170530540747 chr17 45735390 45736836 + 13.2170530540747 NA Intergenic Intergenic -2269 NM_028164 72240 Mm.482897 NM_028164 ENSMUSG00000094690 1600014C23Rik - RIKEN cDNA 1600014C23 gene protein-coding common_peak2_71_283_0.808162864740698_8.55382855187503_13.2153229688349 chr5 64553712 64555432 + 13.2153229688349 NA Intergenic Intergenic 56127 NR_045078 100042198 Mm.25191 NR_045078 ENSMUSG00000105402 Gm3716 Gm1683 predicted gene 3716 ncRNA common_peak2_103_1116_-0.51676760346967_9.86702966874848_13.2149037079556 chr13 45871229 45873907 + 13.2149037079556 NA intron (NM_009124, intron 2 of 7) intron (NM_009124, intron 2 of 7) 92423 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_27_323_-1.0532852528667_7.81320737645127_13.2135390493777 chr2 30171509 30172083 + 13.2135390493777 NA exon (NM_007931, exon 1 of 3) exon (NM_007931, exon 1 of 3) 272 NM_007931 13804 Mm.474473 NM_007931 ENSMUSG00000015337 Endog - endonuclease G protein-coding common_peak1_269_3093_-0.298332016544764_11.4460914731767_13.2128973528392 chr9 61678777 61681351 + 13.2128973528392 NA Intergenic Intergenic 234446 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_70_277_0.81421847312351_8.52605030928526_13.2096972780018 chr5 140829643 140830575 + 13.2096972780018 NA exon (NM_010302, exon 1 of 4) exon (NM_010302, exon 1 of 4) 322 NM_010302 14673 Mm.370185 NM_010302 ENSMUSG00000000149 Gna12 AI414047|AI504261|Galpha12 guanine nucleotide binding protein, alpha 12 protein-coding common_peak1_24_294_-1.11855595211282_7.64529316819279_13.2078989114777 chr14 54399178 54399809 + 13.2078989114777 NA intron (NM_011405, intron 4 of 11) intron (NM_011405, intron 4 of 11) 9979 NM_001253680 20540 Mm.142455 NM_011405 ENSMUSG00000000958 Slc7a7 AI790233|my+lat1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 protein-coding unique_peak2_4_99_-2.40594658451666_5.44088289751639_13.2046953051521-2 chr9 45262968 45263896 + 13.2046953051521 NA intron (NM_008348, intron 5 of 6) intron (NM_008348, intron 5 of 6) 3275 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA unique_peak2_4_99_-2.40594658451666_5.44088289751639_13.2046953051521 chr2 25157883 25158487 + 13.2046953051521 NA Intergenic B2_Mm2|SINE|B2 -22573 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak2_584_5646_0.201914636658174_12.5642262343104_13.2034072007345 chr1 134075676 134084900 + 13.2034072007345 NA Intergenic Intergenic -1133 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_130_1417_-0.452554555392643_10.2433645395432_13.2033080137438 chr4 129334304 129335393 + 13.2033080137438 NA intron (NM_009030, intron 1 of 11) CpG 522 NM_009030 19646 Mm.12145 NM_009030 ENSMUSG00000057236 Rbbp4 RBAP48|mRbAp48 retinoblastoma binding protein 4 protein-coding common_peak1_83_363_0.722904625972514_8.86924695318495_13.1933476951683 chr6 108688545 108689565 + 13.1933476951683 NA Intergenic Intergenic -28121 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA unique_peak2_17_226_-1.32186312541825_7.16561692458179_13.1930264466511 chr7 45800570 45801517 + 13.1930264466511 NA exon (NM_001005511, exon 15 of 16) exon (NM_001005511, exon 15 of 16) 13273 NM_011181 19158 Mm.272130 NM_011181 ENSMUSG00000003269 Cyth2 ARNO|CLM2|Pscd2 cytohesin 2 protein-coding common_peak1_17_226_-1.32186312541825_7.16561692458179_13.1930264466511 chr9 100455694 100456106 + 13.1930264466511 NA Intergenic Intergenic 30573 NM_001033543 213208 Mm.242896 NM_001033543 ENSMUSG00000044244 Il20rb AV228068|Fndc6|Gm186|Il20R2 interleukin 20 receptor beta protein-coding common_peak2_231_2617_-0.325749133873606_11.1913748150084_13.1919839727379 chr11 88046585 88050496 + 13.1919839727379 NA exon (NM_001078167, exon 2 of 3) exon (NM_001078167, exon 2 of 3) 1167 NM_173374 110809 Mm.391719 NM_173374 ENSMUSG00000018379 Srsf1 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1 serine/arginine-rich splicing factor 1 protein-coding common_peak1_248_2828_-0.31243607607462_11.3098584233589_13.1907008730099 chr9 45296243 45299488 + 13.1907008730099 NA Intergenic Intergenic -21235 NM_001013373 214531 Mm.394987 NM_001013373 ENSMUSG00000037129 Tmprss13 BC010843|Tpmrss13 transmembrane protease, serine 13 protein-coding common_peak1_68_739_-0.648786140269518_9.20698839038155_13.1896607275745 chrX 96130193 96131390 + 13.1896607275745 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 34746 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_411_4963_-0.232514893980905_12.1610299531399_13.1869074195514 chr11 84868103 84872192 + 13.1869074195514 NA promoter-TSS (NR_131197) promoter-TSS (NR_131197) 142 NR_131201 102635561 Mm.341797 NR_131197 Ggnbp2os - gametogenetin binding protein 2, opposite strand ncRNA common_peak1_45_502_-0.809341474525661_8.5697438525427_13.1853114117681-2 chr2 156065086 156065756 + 13.1853114117681 NA exon (NM_139151, exon 1 of 12) exon (NM_139151, exon 1 of 12) 208 NM_139151 245865 Mm.330713 NM_139151 ENSMUSG00000038180 Spag4 1700041K21Rik|MNCb-0953|Sun4|mKIAA4118 sperm associated antigen 4 protein-coding common_peak1_45_502_-0.809341474525661_8.5697438525427_13.1853114117681 chr12 55124240 55124927 + 13.1853114117681 NA promoter-TSS (NM_028527) promoter-TSS (NM_028527) 55 NM_028527 73385 Mm.439875 NM_028527 ENSMUSG00000095595 Fam177a 1700047I17Rik|1700047I17Rik1|C14orf24|D730001C10Rik|Fam177a1 family with sequence similarity 177, member A protein-coding common_peak1_330_3879_-0.264448692412421_11.7896165908683_13.1847137204449 chr16 92865638 92869086 + 13.1847137204449 NA Intergenic MLT1L|LTR|ERVL-MaLR -41288 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_261_1918_0.337560576837848_11.0749192846143_13.1826691063576 chr8 94600759 94603228 + 13.1826691063576 NA promoter-TSS (NM_026274) promoter-TSS (NM_026274) 52 NM_026274 67610 Mm.109074 NM_026274 ENSMUSG00000050079 Rspry1 4930470D19Rik|AI608258 ring finger and SPRY domain containing 1 protein-coding common_peak2_307_3579_-0.27579770900584_11.6678450176487_13.1740503417916 chr11 97681522 97686630 + 13.1740503417916 NA 3' UTR (NM_139311, exon 20 of 20) 3' UTR (NM_139311, exon 20 of 20) -1876 NM_001085500 217149 Mm.29659 NM_001085500 ENSMUSG00000078695 Cisd3 Mel-13|Mel13 CDGSH iron sulfur domain 3 protein-coding common_peak2_92_426_0.6727244612671_9.07445449025404_13.1714913133099 chr2 156839469 156841242 + 13.1714913133099 NA intron (NM_001291124, intron 1 of 3) CpG 348 NM_173396 228839 Mm.315625 NM_173396 ENSMUSG00000062175 Tgif2 4921501K24|5730599O09Rik|C80753|C81206 TGFB-induced factor homeobox 2 protein-coding common_peak1_84_909_-0.578080887233567_9.54068229146927_13.1651041170149 chr19 29366432 29367622 + 13.1651041170149 NA promoter-TSS (NM_021893) promoter-TSS (NM_021893) -411 NM_021893 60533 Mm.245363 NM_021893 ENSMUSG00000016496 Cd274 A530045L16Rik|B7h1|Pdcd1l1|Pdcd1lg1|Pdl1 CD274 antigen protein-coding common_peak2_83_898_-0.581478039343237_9.52143828584283_13.1640538572862 chr16 24628308 24630676 + 13.1640538572862 NA intron (NM_001145952, intron 4 of 11) intron (NM_001145952, intron 4 of 11) -92363 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak2_32_372_-0.965711872594357_8.06017588395806_13.1640380335594 chrX 114474085 114475531 + 13.1640380335594 NA exon (NM_172781, exon 1 of 11) exon (NM_172781, exon 1 of 11) 475 NM_001290477 237010 Mm.132583 NM_172781 ENSMUSG00000025597 Klhl4 B130014A11|C130018J01Rik kelch-like 4 protein-coding common_peak2_173_1915_-0.384471703883971_10.7116459937942_13.163906855077 chr1 183344678 183346379 + 13.163906855077 NA intron (NM_177389, intron 6 of 26) GC_rich|Low_complexity|Low_complexity 24037 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding common_peak1_48_532_-0.781115485848492_8.66743397983493_13.1626187716215 chr17 23673501 23674406 + 13.1626187716215 NA promoter-TSS (NM_001008425) promoter-TSS (NM_001008425) -183 NM_001008425 386612 Mm.328831 NM_001008425 ENSMUSG00000041319 Thoc6 F830014G06Rik|Wdr58 THO complex 6 protein-coding common_peak1_20_255_-1.2225253562015_7.38873732189925_13.1610242644671 chr18 50032812 50033380 + 13.1610242644671 NA intron (NM_001177759, intron 1 of 1) intron (NM_001177759, intron 1 of 1) -20186 NM_134131 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding common_peak2_42_116_1.17536245067055_7.45804594491868_13.1552250775468 chr5 21374279 21375352 + 13.1552250775468 NA intron (NM_008013, intron 1 of 1) MIRb|SINE|MIR 2142 NM_008013 14190 Mm.292100 NM_008013 ENSMUSG00000039899 Fgl2 AI385601|musfiblp fibrinogen-like protein 2 protein-coding common_peak2_248_1788_0.348702713269724_10.9792890286868_13.1549378824371 chr12 108763724 108767053 + 13.1549378824371 NA Intergenic Intergenic -27923 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak2_74_802_-0.619106469227647_9.33970294290349_13.1539621804277 chr10 86726861 86728777 + 13.1539621804277 NA intron (NM_153595, intron 3 of 4) intron (NM_153595, intron 3 of 4) 15054 NM_153595 103220 Mm.440762 NM_153595 ENSMUSG00000044937 Ttc41 AI449705|AU041509|Gnn tetratricopeptide repeat domain 41 protein-coding common_peak1_80_866_-0.593546100228956_9.46311513310736_13.1499625780621 chr19 6362569 6363599 + 13.1499625780621 NA promoter-TSS (NM_001110791) promoter-TSS (NM_001110791) -606 NM_011750 22668 Mm.256422 NM_011750 ENSMUSG00000024949 Sf1 BBP|MZFM|WBP4|Zfp162 splicing factor 1 protein-coding common_peak1_46_137_1.09460663064785_7.65582777210209_13.1452219124476 chr17 73970141 73971169 + 13.1452219124476 NA Intergenic Intergenic -20459 NM_011723 22436 Mm.11223 NM_011723 ENSMUSG00000024066 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase protein-coding unique_peak1_16_13_2.59618133891657_5.10544559151589_13.1436864185734-2 chr11 96470218 96470638 + 13.1436864185734 NA intron (NM_001033186, intron 1 of 12) B1_Mur1|SINE|Alu 5837 NM_001177898 78473 Mm.395840 NM_001033186 ENSMUSG00000057058 Skap1 1700091G21Rik|Scap1|Skap-55 src family associated phosphoprotein 1 protein-coding unique_peak1_16_13_2.59618133891657_5.10544559151589_13.1436864185734 chr1 177712247 177712734 + 13.1436864185734 NA Intergenic B3A|SINE|B2 -17324 NM_027077 69428 Mm.84467 NM_027077 ENSMUSG00000015962 1700016C15Rik - RIKEN cDNA 1700016C15 gene protein-coding unique_peak2_14_197_-1.44731249866826_6.90570037074548_13.1433278446394 chr4 7340820 7342306 + 13.1433278446394 NA Intergenic Intergenic -219125 NR_040645 71510 Mm.410775 NR_040645 ENSMUSG00000086070 8430436N08Rik - RIKEN cDNA 8430436N08 gene ncRNA common_peak1_58_635_-0.70735655024253_8.95920468016309_13.1413258254161 chr15 66800935 66801848 + 13.1413258254161 NA intron (NM_001029841, intron 2 of 7) intron (NM_001029841, intron 2 of 7) 30438 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_40_451_-0.858735697349762_8.39081111374031_13.1406567642697 chr5 136198350 136198992 + 13.1406567642697 NA intron (NM_025774, intron 1 of 5) CpG 283 NM_025774 66801 Mm.425295 NM_025774 ENSMUSG00000039737 Prkrip1 8430424D23Rik|C114 Prkr interacting protein 1 (IL11 inducible) protein-coding common_peak1_31_362_-0.980960163684227_8.01334565615364_13.1352066781718 chr13 92354704 92355109 + 13.1352066781718 NA promoter-TSS (NM_010829) promoter-TSS (NM_010829) 97 NM_001311120 17686 Mm.343101 NM_010829 ENSMUSG00000014850 Msh3 D13Em1|Rep-3|Rep3 mutS homolog 3 protein-coding common_peak1_31_362_-0.980960163684227_8.01334565615364_13.1352066781718-2 chr7 16207723 16208186 + 13.1352066781718 NA intron (NM_027883, intron 7 of 16) intron (NM_027883, intron 7 of 16) 14039 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding unique_peak1_19_21_2.23170260899348_5.57528292313404_13.1332998319255 chr1 127270515 127271059 + 13.1332998319255 NA intron (NM_145128, intron 2 of 17) intron (NM_145128, intron 2 of 17) 65801 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding unique_peak1_19_21_2.23170260899348_5.57528292313404_13.1332998319255-2 chr5 134221521 134222064 + 13.1332998319255 NA exon (NM_001286037, exon 11 of 11) exon (NM_001286037, exon 11 of 11) 7833 NM_001286037 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak2_65_707_-0.66367329123576_9.13576890446512_13.1311300083332 chr10 78184294 78186277 + 13.1311300083332 NA promoter-TSS (NM_029546) promoter-TSS (NM_029546) -136 NM_029546 110816 Mm.103522 NM_029546 ENSMUSG00000032834 Pwp2 6530411D08Rik|Pwp2h|wdp103 PWP2 periodic tryptophan protein homolog (yeast) protein-coding common_peak1_96_1038_-0.535641575540803_9.75315915113381_13.1224129384414 chr11 78555872 78557329 + 13.1224129384414 NA Intergenic Intergenic -5865 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e transmembrane protein 97 protein-coding common_peak2_293_2248_0.312555118472506_11.2913455050141_13.1207876694913 chr1 127314449 127323076 + 13.1207876694913 NA intron (NM_145128, intron 3 of 17) intron (NM_145128, intron 3 of 17) 113776 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_196_1289_0.405951266314684_10.536130983468_13.1199303747984 chr2 26910221 26911986 + 13.1199303747984 NA promoter-TSS (NM_001033908) promoter-TSS (NM_001033908) 296 NM_013721 27176 Mm.328601 NM_013721 ENSMUSG00000062647 Rpl7a Surf3 ribosomal protein L7A protein-coding unique_peak2_7_129_-1.95272686108964_6.04600438248363_13.1186955790876 chr12 103425988 103426545 + 13.1186955790876 NA promoter-TSS (NM_020494) promoter-TSS (NM_020494) -399 NM_020494 27225 Mm.3935 NM_020494 ENSMUSG00000041645 Ddx24 1700055J08Rik|2510027P10Rik|AI649272 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 protein-coding common_peak2_132_1439_-0.447952783667313_10.267876704496_13.1184271202172 chr1 16655941 16657896 + 13.1184271202172 NA promoter-TSS (NR_037998) promoter-TSS (NR_037998) -53 NM_026456 67923 Mm.289248 NM_026456 ENSMUSG00000079658 Eloc 2610043E24Rik|2610301I15Rik|AA407206|AI987979|AW049146|Tceb1 elongin C protein-coding common_peak1_49_542_-0.772180884481621_8.69871794556355_13.1175956560749 chr18 62548893 62549576 + 13.1175956560749 NA promoter-TSS (NM_134136) promoter-TSS (NM_134136) 323 NM_177829 328971 Mm.312675 NM_177829 ENSMUSG00000044176 Spink10 A230091H23Rik serine peptidase inhibitor, Kazal type 10 protein-coding common_peak2_201_1336_0.398676754698458_10.5841221274426_13.117576450915 chr9 46011741 46014977 + 13.117576450915 NA intron (NM_027498, intron 1 of 24) CpG 539 NM_027498 70661 Mm.219459 NM_027498 ENSMUSG00000034135 Sik3 5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999 SIK family kinase 3 protein-coding common_peak1_30_61_1.51248589434743_6.71043925756059_13.1172412659382 chr12 3307739 3308495 + 13.1172412659382 NA intron (NM_016676, intron 1 of 5) intron (NM_016676, intron 1 of 5) 1852 NM_016676 19325 Mm.378993 NM_016676 ENSMUSG00000020671 Rab10 AW107754 RAB10, member RAS oncogene family protein-coding unique_peak2_30_352_-0.996842168536874_7.96510328900274_13.1121328856387 chr11 101983541 101985342 + 13.1121328856387 NA intron (NM_028207, intron 1 of 2) CpG 350 NM_028207 72349 Mm.196295 NM_028207 ENSMUSG00000003518 Dusp3 2210015O03Rik|5031436O03Rik|T-DSP11|VHR dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) protein-coding unique_peak2_30_352_-0.996842168536874_7.96510328900274_13.1121328856387-2 chr6 83012854 83014483 + 13.1121328856387 NA intron (NM_033079, intron 7 of 9) intron (NM_033079, intron 7 of 9) 19803 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding common_peak1_37_421_-0.894122674123939_8.27403785164522_13.1084953114347 chr7 81861498 81862305 + 13.1084953114347 NA promoter-TSS (NM_001291282) promoter-TSS (NM_001291282) -786 NM_001291282 107769 Mm.221412 NM_145375 ENSMUSG00000038623 Tm6sf1 AI428514|BC023123|C630016D09Rik transmembrane 6 superfamily member 1 protein-coding common_peak1_123_1337_-0.465955573534442_10.1528846138742_13.1080788455533 chr1 173441137 173442265 + 13.1080788455533 NA intron (NM_001013779, intron 2 of 8) intron (NM_001013779, intron 2 of 8) 21097 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak2_199_1317_0.401717470687402_10.5649933903518_13.1080657447322 chr2 157005684 157008056 + 13.1080657447322 NA intron (NM_025853, intron 1 of 10) CpG 205 NM_025853 66934 Mm.25410 NM_025853 ENSMUSG00000027635 Dsn1 1700022L09Rik|AW552447 DSN1 homolog, MIS12 kinetochore complex component protein-coding common_peak2_60_216_0.902968218602493_8.21303534174573_13.1076479019131 chr18 23840863 23842806 + 13.1076479019131 NA intron (NM_001162942, intron 3 of 7) intron (NM_001162942, intron 3 of 7) 37864 NM_153058 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak2_47_142_1.08051644250006_7.70012955802842_13.107351015034 chr5 118513705 118514618 + 13.107351015034 NA Intergenic Intergenic -46558 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_144_831_0.496329183249797_9.94860430976599_13.1056420435721 chr19 11518313 11519968 + 13.1056420435721 NA intron (NM_027209, intron 1 of 6) intron (NM_027209, intron 1 of 6) 581 NM_027209 69774 Mm.436639 NM_027209 ENSMUSG00000024677 Ms4a6b 1810027D10Rik membrane-spanning 4-domains, subfamily A, member 6B protein-coding unique_peak2_16_216_-1.35801497147031_7.08254374670933_13.1051624510915 chr2 103667194 103668564 + 13.1051624510915 NA intron (NM_178890, intron 1 of 16) ORR1D2|LTR|ERVL-MaLR 93371 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak1_259_1899_0.338355439487298_11.060961422962_13.1041303235586 chr8 94600835 94603015 + 13.1041303235586 NA promoter-TSS (NM_026274) promoter-TSS (NM_026274) -16 NM_026274 67610 Mm.109074 NM_026274 ENSMUSG00000050079 Rspry1 4930470D19Rik|AI608258 ring finger and SPRY domain containing 1 protein-coding common_peak1_155_924_0.472858516576899_10.0897388136921_13.1037078238614 chr6 72389492 72391004 + 13.1037078238614 NA intron (NM_016794, intron 1 of 2) intron (NM_016794, intron 1 of 2) 419 NM_016794 22320 Mm.1838 NM_016794 ENSMUSG00000050732 Vamp8 AU041171|Edb|endobrevin vesicle-associated membrane protein 8 protein-coding common_peak1_180_1144_0.428075432492054_10.3751695992303_13.0943878518339 chr14 105954257 105956893 + 13.0943878518339 NA Intergenic Intergenic -58756 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty homolog 2 (Drosophila) protein-coding common_peak2_150_881_0.48388553942803_10.0265776152715_13.0877555813163 chr5 43781281 43782881 + 13.0877555813163 NA promoter-TSS (NM_001159963) promoter-TSS (NM_001159963) 68 NM_001159963 242960 Mm.25794 NM_178729 ENSMUSG00000039753 Fbxl5 Fbl4|Fir4 F-box and leucine-rich repeat protein 5 protein-coding unique_peak2_28_332_-1.03071505255869_7.86402084079191_13.0857276848033 chr2 31107593 31109552 + 13.0857276848033 NA intron (NM_001177648, intron 1 of 16) MTD|LTR|ERVL-MaLR -12072 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_27_322_-1.048825604676_7.81097755235592_13.0838613718076 chr9 108110319 108110967 + 13.0838613718076 NA exon (NM_007567, exon 5 of 12) exon (NM_007567, exon 5 of 12) -16163 NM_146226 235606 Mm.219639 NM_146226 ENSMUSG00000032590 Apeh - acylpeptide hydrolase protein-coding common_peak2_119_629_0.562673036583137_9.58054453667885_13.0768587772189 chr1 58585627 58587152 + 13.0768587772189 NA promoter-TSS (NM_172513) promoter-TSS (NM_172513) -8 NM_025597 66495 Mm.2033 NM_025597 ENSMUSG00000026032 Ndufb3 2700033I16Rik|CI-B12 NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 protein-coding common_peak1_50_552_-0.763464893107251_8.72940322368108_13.0764897517474 chr13 97386770 97387709 + 13.0764897517474 NA Intergenic ID4_|SINE|ID -47731 NR_110432 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 ENSMUSG00000078952|Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA common_peak2_39_441_-0.870156020574299_8.35282454910428_13.0759129422574 chrX 48256026 48257456 + 13.0759129422574 NA promoter-TSS (NM_028276) promoter-TSS (NM_028276) -193 NM_028276 72554 Mm.336045 NM_028276 ENSMUSG00000063785 Utp14a 2700066J21Rik|JsdX|NY-CO-16|SDCCAG16|T25628|mKIAA0266 UTP14A small subunit processome component protein-coding common_peak2_321_2546_0.294025980271144_11.4615962344098_13.0757621465771 chr15 98566657 98568913 + 13.0757621465771 NA promoter-TSS (NM_009833) promoter-TSS (NM_009833) -149 NM_009833 12455 Mm.29941 NM_009833 ENSMUSG00000011960 Ccnt1 2810478G24Rik|AI115585|CycT1 cyclin T1 protein-coding common_peak1_74_801_-0.617308718165253_9.33880406737229_13.0710806385605 chr14 73397640 73399255 + 13.0710806385605 NA Intergenic Intergenic -13176 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak2_81_350_0.732728355947222_8.82169139827817_13.0710252817755 chr11 58866711 58868166 + 13.0710252817755 NA intron (NM_172403, intron 1 of 4) intron (NM_172403, intron 1 of 4) 198 NM_172403 69944 Mm.32118 NM_172403 ENSMUSG00000020491 2810021J22Rik AI449137 RIKEN cDNA 2810021J22 gene protein-coding common_peak2_316_2492_0.297247790767349_11.4322910628752_13.0686462884401 chr18 36279990 36281948 + 13.0686462884401 NA promoter-TSS (NM_008989) promoter-TSS (NM_008989) -193 NM_008989 19290 Mm.231802 NM_008989 ENSMUSG00000043991 Pura CAGER-1|Pur-alpha|ssCRE-BP purine rich element binding protein A protein-coding common_peak2_91_983_-0.550829078873017_9.66709996590273_13.067245465787 chr14 25926611 25928139 + 13.067245465787 NA promoter-TSS (NM_001270499) promoter-TSS (NM_001270499) -125 NM_025311 66039 Mm.33344 NM_025311 ENSMUSG00000072676 Tmem254a 0610008K04Rik|0610010A22Rik|AA960404|D14Ertd449e|Tmem254 transmembrane protein 254a protein-coding common_peak1_26_45_1.69864561078258_6.3728847614483_13.0666306613317 chr12 69415070 69415666 + 13.0666306613317 NA Intergenic RMER10A|LTR|ERVL 43218 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak1_26_45_1.69864561078258_6.3728847614483_13.0666306613317-2 chr14 20478850 20479376 + 13.0666306613317 NA intron (NM_001110794, intron 1 of 12) intron (NM_001110794, intron 1 of 12) 1020 NM_001110794 11750 Mm.280231 NM_009674 ENSMUSG00000021814 Anxa7 AI265384|AI316497|Anx7|synexin annexin A7 protein-coding common_peak2_48_531_-0.778406198590504_8.66607933620594_13.0611396659125 chr18 34957940 34959580 + 13.0611396659125 NA Intergenic Intergenic -4409 NM_010481 15526 Mm.209419 NM_010481 ENSMUSG00000024359 Hspa9 74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74 heat shock protein 9 protein-coding common_peak1_92_427_0.669349734486444_9.07614185364437_13.0580965248556 chr4 132639064 132639977 + 13.0580965248556 NA intron (NM_210071, intron 1 of 16) intron (NM_210071, intron 1 of 16) 474 NM_010166 14050 Mm.227733 NM_010166 ENSMUSG00000028886 Eya3 AI844637 EYA transcriptional coactivator and phosphatase 3 protein-coding common_peak1_376_3151_0.265616410131026_11.7548600245219_13.0551227352208 chr7 66301791 66305153 + 13.0551227352208 NA intron (NM_146191, intron 10 of 33) intron (NM_146191, intron 10 of 33) 78252 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_140_798_0.505213910651326_9.89465864825364_13.0547329263238 chr7 120676782 120678666 + 13.0547329263238 NA 5' UTR (NM_001164580, exon 1 of 3) 5' UTR (NM_001164580, exon 1 of 3) 104 NM_001164580 233812 Mm.276479 NM_001164580 ENSMUSG00000046096 BC030336 - cDNA sequence BC030336 protein-coding common_peak2_271_2022_0.327704901161312_11.1461330551389_13.0539360841194 chr4 128726784 128729851 + 13.0539360841194 NA intron (NM_001195083, intron 1 of 6) intron (NM_001195083, intron 1 of 6) 746 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic-like 2 (Drosophila) protein-coding common_peak1_38_430_-0.878600609481238_8.31224375434848_13.0532889493796 chr1 40517236 40518199 + 13.0532889493796 NA intron (NM_010553, intron 3 of 12) L1M2|LINE|L1 2355 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_63_234_0.872960938932881_8.31299741603144_13.0532889493796 chr6 15792932 15793919 + 13.0532889493796 NA intron (NM_175088, intron 4 of 4) intron (NM_175088, intron 4 of 4) 72764 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding common_peak1_201_1337_0.397598104150351_10.5846614527166_13.053283760739 chr13 92530087 92531705 + 13.053283760739 NA promoter-TSS (NM_173392) promoter-TSS (NM_173392) -86 NM_173392 218441 Mm.259585 NM_173392 ENSMUSG00000021706 Zfyve16 AI035632|B130024H06Rik|B130031L15|mKIAA0305 zinc finger, FYVE domain containing 16 protein-coding common_peak2_50_159_1.02574268224009_7.83479943600741_13.0469150596969 chr14 73057507 73058451 + 13.0469150596969 NA Intergenic Intergenic -8865 NM_001162412 70086 Mm.158324 NM_133720 ENSMUSG00000033470 Cysltr2 2300001H05Rik|CYSLT2R|Cltr2|Cyslt2 cysteinyl leukotriene receptor 2 protein-coding unique_peak2_8_138_-1.8408680220372_6.19850706170491_13.046904679553-2 chr6 52212910 52213544 + 13.046904679553 NA promoter-TSS (NM_010452) promoter-TSS (NM_010452) -160 NM_010452 15400 Mm.71533 NM_010452 ENSMUSG00000079560 Hoxa3 Hox-1.5|Mo-10 homeobox A3 protein-coding unique_peak2_8_138_-1.8408680220372_6.19850706170491_13.046904679553 chr5 103380476 103381596 + 13.046904679553 NA Intergenic Intergenic -44156 NM_011204 19249 Mm.3414 NM_011204 ENSMUSG00000034573 Ptpn13 AI324989|PTP-BL|PTPL1|Ptpri|RIP protein tyrosine phosphatase, non-receptor type 13 protein-coding common_peak1_109_1179_-0.496667814676933_9.95623723691074_13.0414686933001 chr5 73286823 73288411 + 13.0414686933001 NA Intergenic Intergenic -3433 NR_040688 72276 Mm.271215 NR_040687 ENSMUSG00000100175 1700025M24Rik - RIKEN cDNA 1700025M24 gene ncRNA common_peak2_39_102_1.23124601163391_7.30212353300018_13.0397803464471 chr10 26828226 26829124 + 13.0397803464471 NA intron (NM_176837, intron 1 of 14) L3b|LINE|CR1 56163 NM_176837 73910 Mm.356496 NM_176837 ENSMUSG00000039031 Arhgap18 4833419J07Rik|AI314906|AI843501 Rho GTPase activating protein 18 protein-coding common_peak2_39_102_1.23124601163391_7.30212353300018_13.0397803464471-2 chr15 101974855 101975692 + 13.0397803464471 NA Intergenic Intergenic -20986 NM_212487 332131 Mm.325105 NM_212487 ENSMUSG00000050463 Krt78 2310030B04Rik|Kb40 keratin 78 protein-coding common_peak2_261_2988_-0.301747608644865_11.3945733773557_13.0395448185765 chr5 99976799 99980251 + 13.0395448185765 NA exon (NM_007516, exon 1 of 8) exon (NM_007516, exon 1 of 8) 413 NM_001077266 11991 Mm.150231 NM_007516 ENSMUSG00000000568 Hnrnpd Auf1|Hnrpd heterogeneous nuclear ribonucleoprotein D protein-coding common_peak1_17_225_-1.31549360054252_7.16243216214393_13.0392237943424 chr11 106201709 106202140 + 13.0392237943424 NA intron (NM_026009, intron 12 of 12) BC1_Mm|scRNA|scRNA -8321 NM_001252449 72149 Mm.403722 NM_028126 ENSMUSG00000069631 Strada 2610019A05Rik|6030402H20Rik|AI480680|E130112C09Rik STE20-related kinase adaptor alpha protein-coding common_peak1_87_939_-0.563494581498336_9.59476965581583_13.0381108088538 chr9 32909754 32910851 + 13.0381108088538 NA intron (NR_131058, intron 3 of 3) intron (NR_131058, intron 3 of 3) 18664 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak1_95_1026_-0.537220375853387_9.7356102783915_13.0366535722397 chr2 30132625 30133762 + 13.0366535722397 NA promoter-TSS (NM_146252) promoter-TSS (NM_146252) -678 NM_146252 70296 Mm.19172 NM_146252 ENSMUSG00000039678 Tbc1d13 2600014A06Rik|BC025586 TBC1 domain family, member 13 protein-coding common_peak1_44_490_-0.813400576750061_8.53287892593966_13.0353932812702 chr14 65343098 65343758 + 13.0353932812702 NA Intergenic Intergenic -15248 NM_199029 380912 Mm.270087 NM_199029 ENSMUSG00000034522 Zfp395 BC053701|Gm910 zinc finger protein 395 protein-coding common_peak2_52_571_-0.744129571335277_8.78780655111075_13.0335545305205 chrX 36988001 36990294 + 13.0335545305205 NA intron (NM_001177323, intron 1 of 9) intron (NM_001177323, intron 1 of 9) 548 NM_001177324 56526 Mm.260036 NM_019942 ENSMUSG00000050379 Sept6 2810035H17Rik|C920001C06Rik|Sep6|mKIAA0128 septin 6 protein-coding common_peak2_122_1324_-0.466198863119214_10.1386772127783_13.0272507182662 chr9 108338083 108340904 + 13.0272507182662 NA exon (NM_008160, exon 1 of 2) exon (NM_008160, exon 1 of 2) 413 NM_008160 14775 Mm.1090 NM_008160 ENSMUSG00000063856 Gpx1 AI195024|AL033363|CGPx|GPx-1|GSHPx-1|Gpx glutathione peroxidase 1 protein-coding common_peak2_46_511_-0.796868912573983_8.60156554371301_13.0257374883264 chr19 5087514 5089189 + 13.0257374883264 NA promoter-TSS (NM_026553) promoter-TSS (NM_026553) -187 NM_026553 68090 Mm.44202 NM_026553 ENSMUSG00000024875 Yif1a 5330422J23Rik|54TM|Yif1|Yif1p Yip1 interacting factor homolog A (S. cerevisiae) protein-coding common_peak1_46_511_-0.796868912573983_8.60156554371301_13.0257374883264 chr1 191312581 191313332 + 13.0257374883264 NA intron (NM_025424, intron 1 of 3) intron (NM_025424, intron 1 of 3) 5162 NM_025424 66208 Mm.46444 NM_025424 ENSMUSG00000037499 Nenf 1110060M21Rik|SCIRP10|Spuf neuron derived neurotrophic factor protein-coding common_peak2_60_654_-0.690831645377839_9.00993527373589_13.0180252552393 chr4 149773232 149774713 + 13.0180252552393 NA intron (NM_027460, intron 1 of 6) CpG 295 NM_027460 70556 Mm.41877 NM_027460 ENSMUSG00000028982 Slc25a33 5730438N18Rik|Pnc1 solute carrier family 25, member 33 protein-coding common_peak1_20_254_-1.21687879306036_7.38591404032868_13.0160041579659 chr16 46022491 46022995 + 13.0160041579659 NA Intergenic Intergenic -12330 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding common_peak2_200_1328_0.398552827026831_10.5754018027896_13.0159998716251 chr4 44755469 44757600 + 13.0159998716251 NA promoter-TSS (NM_138590) promoter-TSS (NM_138590) -25 NM_138590 319885 Mm.331576 NM_138590 ENSMUSG00000035649 Zcchc7 4930572I07Rik|D4Wsu132e zinc finger, CCHC domain containing 7 protein-coding unique_peak2_21_263_-1.1845963766645_7.4520959310262_13.0126263775424 chr9 114411765 114413321 + 13.0126263775424 NA intron (NR_108101, intron 1 of 14) intron (NR_108101, intron 1 of 14) 11448 NM_001200002 100504715 Mm.290516 NM_001200002 ENSMUSG00000079260 Tmppe - transmembrane protein with metallophosphoesterase domain protein-coding unique_peak2_2_77_-2.95146368432922_4.80967037669764_13.0122504788917 chr13 9093151 9093703 + 13.0122504788917 NA promoter-TSS (NM_172585) promoter-TSS (NM_172585) -454 NM_001311117 217980 Mm.234944 NM_172585 ENSMUSG00000033499 Larp4b A630096F19|AI256361|D13Wsu64e|Larp5 La ribonucleoprotein domain family, member 4B protein-coding common_peak1_140_1528_-0.431107087781502_10.3628191474701_13.0107354678084 chrX 12761106 12763027 + 13.0107354678084 NA promoter-TSS (NM_012005) promoter-TSS (NM_012005) -93 NM_001048208 26896 Mm.17616 NM_012005 ENSMUSG00000064127 Med14 9930001L01Rik|AU041628|Crsp2|ENSMUSG00000073278|Gm641|ORF1|Trap170 mediator complex subunit 14 protein-coding common_peak2_223_1546_0.371144202127958_10.780829582513_13.010084361129 chr10 62448675 62450713 + 13.010084361129 NA promoter-TSS (NM_181423) promoter-TSS (NM_181423) -1 NM_181423 338359 Mm.235898 NM_181423 ENSMUSG00000020079 Supv3l1 6330443E10Rik suppressor of var1, 3-like 1 (S. cerevisiae) protein-coding common_peak1_150_882_0.482250757337086_10.027395006317_13.0088001848926 chr19 56821343 56822649 + 13.0088001848926 NA Intergenic CpG -4213 NM_001002238 83561 Mm.247541 NM_031387 ENSMUSG00000025081 Tdrd1 MTR-1 tudor domain containing 1 protein-coding common_peak1_111_1201_-0.491431808320549_9.98550527655091_13.0053662397101 chr15 57975515 57977247 + 13.0053662397101 NA Intergenic L2b|LINE|L2 -9522 NM_173862 239463 Mm.221241 NM_173862 ENSMUSG00000051225 Fam83a - family with sequence similarity 83, member A protein-coding common_peak1_64_241_0.858051283058302_8.34788887880375_13.0033980537654 chr8 121184735 121185735 + 13.0033980537654 NA Intergenic Intergenic 57550 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak2_53_581_-0.736055464882332_8.81684761046712_13.0021907355429 chr9 118058079 118060264 + 13.0021907355429 NA exon (NM_001286508, exon 7 of 8) exon (NM_001286508, exon 7 of 8) 18649 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_285_2167_0.316653616414913_11.2404758495613_13.0014707844242 chr11 83566593 83571407 + 13.0014707844242 NA Intergenic Intergenic 9636 NM_011338 20308 Mm.416125 NM_011338 ENSMUSG00000019122 Ccl9 CCF18|MRP-2|Scya10|Scya9 chemokine (C-C motif) ligand 9 protein-coding common_peak1_57_622_-0.707812727325077_8.92918198936146_12.9993148372573 chr5 124425758 124426601 + 12.9993148372573 NA promoter-TSS (NM_001081203) promoter-TSS (NM_001081203) -265 NM_001081203 243272 Mm.23879 NM_001081203 ENSMUSG00000038095 Sbno1 9330180L10Rik|AI849128|AW557836|BC021875|Sbno|mSno1|sno strawberry notch homolog 1 (Drosophila) protein-coding common_peak1_62_674_-0.677134531986411_9.06017642594499_12.996162467427 chr7 28810847 28811286 + 12.996162467427 NA exon (NM_177301, exon 1 of 13) exon (NM_177301, exon 1 of 13) 176 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak1_37_420_-0.890699908483149_8.27232646882482_12.9949391475677 chr11 22814048 22814690 + 12.9949391475677 NA Intergenic Intergenic 45366 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak1_159_1747_-0.400518308310755_10.5712303153452_12.9932276655403-2 chr8 104533842 104535778 + 12.9932276655403 NA promoter-TSS (NM_144931) promoter-TSS (NM_144931) 110 NM_001301164 12354 Mm.129265 NM_053070 ENSMUSG00000031883 Car7 AV343731|Ca7 carbonic anhydrase 7 protein-coding common_peak1_159_1747_-0.400518308310755_10.5712303153452_12.9932276655403 chr14 20673571 20675307 + 12.9932276655403 NA intron (NM_172596, intron 1 of 22) CpG 118 NM_001168273 218811 Mm.173119 NM_172596 ENSMUSG00000039367 Sec24c 2610204K03Rik|mKIAA0079 Sec24 related gene family, member C (S. cerevisiae) protein-coding common_peak2_359_2963_0.272685838817864_11.6696726517148_12.993184399356 chr11 5097565 5100474 + 12.993184399356 NA promoter-TSS (NM_001290492) promoter-TSS (NM_001290492) 69 NM_001283062 14030 Mm.142822 NM_007968 ENSMUSG00000009079 Ewsr1 Ews|Ewsh Ewing sarcoma breakpoint region 1 protein-coding common_peak1_72_779_-0.625011287363982_9.29482467006762_12.9918964192476 chr10 117894614 117895701 + 12.9918964192476 NA Intergenic MER2|DNA|TcMar-Tigger -30302 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_80_864_-0.590214239531209_9.46144920275848_12.990595479659 chr9 44343392 44344503 + 12.990595479659 NA intron (NM_013551, intron 1 of 13) CpG 281 NM_013551 15288 Mm.247676 NM_013551 ENSMUSG00000032126 Hmbs PBGD|T25658|Ups|Uros1 hydroxymethylbilane synthase protein-coding common_peak1_30_351_-0.99274941390299_7.9630569116858_12.9882226339371 chr19 41365357 41365847 + 12.9882226339371 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 19468 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_102_1102_-0.515669191814643_9.84938247968406_12.9857096875306 chr8 106005909 106007238 + 12.9857096875306 NA Intergenic B3|SINE|B2 -4905 NM_025518 66369 Mm.287500 NM_025518 ENSMUSG00000031901 Dus2 2310016K04Rik|Dus2l dihydrouridine synthase 2 protein-coding common_peak1_525_4914_0.214077629233872_12.3700145158449_12.9828722703816 chr17 34119524 34123259 + 12.9828722703816 NA intron (NM_001204973, intron 1 of 12) CpG-6274 356 NM_010238 14312 Mm.3444 NM_010238 ENSMUSG00000024335 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg-1|Fsrg1|Nat|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 protein-coding common_peak2_624_6166_0.191873234915006_12.6862897484355_12.982241104373 chr16 91457526 91467290 + 12.982241104373 NA Intergenic Lx7|LINE|L1 -2696 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA unique_peak2_4_98_-2.39144701482155_5.43363311266884_12.9802675000171 chr12 115801811 115802591 + 12.9802675000171 NA Intergenic RLTR40|LTR|ERVK -106407 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA common_peak1_51_165_1.00699412448036_7.87853649358711_12.9789962762761 chr5 150195469 150196325 + 12.9789962762761 NA Intergenic Intergenic -64033 NM_172887 320365 Mm.216590 NM_172887 ENSMUSG00000056602 Fry 13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143 FRY microtubule binding protein protein-coding common_peak2_150_1642_-0.413596379964522_10.4753185749678_12.9786418937828 chr11 60877838 60879770 + 12.9786418937828 NA 5' UTR (NM_001168507, exon 1 of 3) 5' UTR (NM_001168507, exon 1 of 3) 234 NM_173453 216821 Mm.28063 NM_173453 ENSMUSG00000043284 Tmem11 5730466P16Rik|AA409091 transmembrane protein 11 protein-coding common_peak2_228_1595_0.365222958535828_10.8228564154903_12.9747532821345 chr1 87852372 87855972 + 12.9747532821345 NA intron (NM_177646, intron 1 of 29) intron (NM_177646, intron 1 of 29) 885 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak1_54_591_-0.728162347243034_8.84537219200743_12.9739164415063 chr1 128359086 128359693 + 12.9739164415063 NA intron (NM_008567, intron 1 of 16) CpG 316 NM_008567 17219 Mm.4933 NM_008567 ENSMUSG00000026355 Mcm6 ASP-l1|D1Wsu22e|Mcmd6 minichromosome maintenance complex component 6 protein-coding common_peak2_59_211_0.907348289220861_8.18159459917363_12.9734268947482 chr17 84228349 84229982 + 12.9734268947482 NA exon (NM_183021, exon 34 of 38) exon (NM_183021, exon 34 of 38) -41218 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_265_1962_0.331668166382546_11.1046785406574_12.9727896772993 chr19 5814972 5819023 + 12.9727896772993 NA Intergenic Intergenic -14326 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak1_88_949_-0.558765334454122_9.61240103599125_12.9681172235089 chr7 16841231 16842490 + 12.9681172235089 NA TTS (NM_133789) TTS (NM_133789) -1042 NM_001252458 101540 Mm.1881 NM_178900 ENSMUSG00000041187 Prkd2 AI325941|PKD2 protein kinase D2 protein-coding common_peak2_215_2416_-0.336957257366919_11.0705231290821_12.9673633733815 chr7 106212432 106217037 + 12.9673633733815 NA intron (NM_029000, intron 1 of 3).2 intron (NM_029000, intron 1 of 3).2 603 NM_001243039 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak2_299_2314_0.306577852514781_11.330085404405_12.9669794036636 chr8 57651274 57655127 + 12.9669794036636 NA promoter-TSS (NM_001167981) promoter-TSS (NM_001167981) -145 NM_144731 108150 Mm.62886 NM_144731 ENSMUSG00000031608 Galnt7 AI225872 UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 protein-coding common_peak1_39_440_-0.866888306740389_8.35119069218733_12.9650397439671 chr13 52828405 52829074 + 12.9650397439671 NA Intergenic ID_B1|SINE|B4 -71534 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak2_270_2013_0.327619565340623_11.1396577506771_12.9646035213707 chr18 84588448 84590586 + 12.9646035213707 NA promoter-TSS (NM_001033341) promoter-TSS (NM_001033341) -13 NM_001033341 240476 Mm.329575 NM_001033341 ENSMUSG00000048410 Zfp407 6430585N13Rik|Gm333|Gm334|Gm948|ZNF407 zinc finger protein 407 protein-coding common_peak1_44_127_1.12617863756463_7.56308931878232_12.9642838776397 chr2 156991423 156992036 + 12.9642838776397 NA intron (NM_180956, intron 1 of 16) CpG 382 NM_013865 29812 Mm.279256 NM_013865 ENSMUSG00000027634 Ndrg3 4833415O14Rik|AI747193|Ndr3 N-myc downstream regulated gene 3 protein-coding common_peak1_249_2835_-0.308908727038455_11.3151874537203_12.9587450876835 chr11 6474556 6476909 + 12.9587450876835 NA exon (NM_011221, exon 1 of 1) exon (NM_011221, exon 1 of 1) 344 NM_011221 19291 Mm.296150 NM_011221 ENSMUSG00000094483 Purb 2310015K15Rik|AA114818|Cager-2|D11Bwg0414e purine rich element binding protein B protein-coding common_peak1_25_42_1.72915648993883_6.29084299967151_12.9543329931586 chr12 79351180 79351767 + 12.9543329931586 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 54122 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_167_1030_0.447482959989458_10.2335700973628_12.9539380322783-2 chr2 18765299 18767819 + 12.9539380322783 NA Intergenic Intergenic -5697 NR_126079 100041479 Mm.393659 NR_126079 ENSMUSG00000092353 Gm3363 - predicted gene 3363 ncRNA common_peak2_167_1030_0.447482959989458_10.2335700973628_12.9539380322783 chr1 93634829 93636661 + 12.9539380322783 NA promoter-TSS (NM_021537) promoter-TSS (NM_021537) -18 NM_021537 59041 Mm.28761 NM_021537 ENSMUSG00000026277 Stk25 1500019J11Rik|AU018434|C86992|Ste20-like|Ysk1 serine/threonine kinase 25 (yeast) protein-coding common_peak1_67_260_0.828854886776998_8.44233343995838_12.9534383795296 chr4 121097296 121098492 + 12.9534383795296 NA exon (NM_172700, exon 1 of 10) exon (NM_172700, exon 1 of 10) 349 NM_172700 230709 Mm.34399 NM_172700 ENSMUSG00000043207 Zmpste24 A530043O15Rik|D030046F19|FACE1|Face-1|MADB|STE24|Ste24p zinc metallopeptidase, STE24 protein-coding common_peak2_243_1742_0.350387219293998_10.9425504637727_12.9533286059891 chr9 111142706 111147942 + 12.9533286059891 NA intron (NM_001164838, intron 3 of 14) B1_Mur4|SINE|Alu 27213 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding common_peak2_226_1576_0.366977802197221_10.8064558458891_12.9527368185848 chr7 31158918 31162670 + 12.9527368185848 NA Intergenic Intergenic -1564 NR_046062 100038516 Mm.387223 NR_046062 ENSMUSG00000100985 Gm10640 EG668322|ENSMUSG00000074193 predicted gene 10640 ncRNA common_peak1_66_715_-0.653272077114533_9.15717973870699_12.9526720462716 chr5 86064937 86065644 + 12.9526720462716 NA intron (NM_007683, intron 1 of 18) CpG 293 NM_007683 12617 Mm.4649 NM_007683 ENSMUSG00000029253 Cenpc1 CENP-C|Cenpc centromere protein C1 protein-coding common_peak1_22_273_-1.15957127886702_7.51824644352702_12.9523460012701 chr2 22805106 22805662 + 12.9523460012701 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 31057 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak1_223_1547_0.370211927432583_10.7812957198607_12.9505418708727 chr16 49969435 49971685 + 12.9505418708727 NA Intergenic Intergenic -9900 NR_045001 628951 Mm.428032 NR_045001 Gm6936 - predicted gene 6936 ncRNA common_peak1_56_193_0.944585877363045_8.07220578086865_12.9498623920565 chr6 128607332 128608133 + 12.9498623920565 NA Intergenic MTC|LTR|ERVL-MaLR 15202 NM_001159902 17057 Mm.16729 NM_010737 ENSMUSG00000030361 Klrb1a Ly55a|NKR-P1.7|NKR-P1A|NKRP12|Nkrp1-a|Nkrp1a|ly-55A killer cell lectin-like receptor subfamily B member 1A protein-coding common_peak1_46_138_1.08419001470251_7.66103608007476_12.9485676340895 chr10 61336351 61337372 + 12.9485676340895 NA intron (NM_013753, intron 18 of 19) intron (NM_013753, intron 18 of 19) 39025 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding unique_peak2_16_215_-1.3513512411893_7.07921188156882_12.9485298465296 chr12 85446652 85447948 + 12.9485298465296 NA Intergenic Intergenic -26601 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak1_284_3278_-0.286435879964566_11.5358222464108_12.9465390759894 chr4 116555447 116558715 + 12.9465390759894 NA promoter-TSS (NM_029868) promoter-TSS (NM_029868) -646 NM_029868 77110 Mm.41715 NM_029868 ENSMUSG00000034042 Gpbp1l1 5330440M15Rik|BC002292 GC-rich promoter binding protein 1-like 1 protein-coding common_peak1_92_428_0.665982883388045_9.07782527919357_12.9453268578448 chr2 28641007 28642027 + 12.9453268578448 NA intron (NM_001289576, intron 1 of 22) CpG 284 NM_022887 64930 Mm.224354 NM_022887 ENSMUSG00000026812 Tsc1 - tuberous sclerosis 1 protein-coding common_peak1_12_176_-1.53879661662842_6.69820724176879_12.94513043458 chr7 12949784 12950118 + 12.94513043458 NA Intergenic Intergenic -15913 NM_178732 243834 Mm.133086 NM_178732 ENSMUSG00000004500 Zfp324 A930002M05|D430030K24Rik|ZF5128 zinc finger protein 324 protein-coding common_peak1_124_1345_-0.460341915595613_10.1642917368125_12.9442679746036 chr4 134287340 134288617 + 12.9442679746036 NA promoter-TSS (NM_001163794) promoter-TSS (NM_001163794) -132 NM_146156 230809 Mm.22778 NM_146156 ENSMUSG00000050890 Pdik1l BC027088|stk35l2 PDLIM1 interacting kinase 1 like protein-coding common_peak2_115_1245_-0.481200416138721_10.0424881449546_12.9428915793023 chr7 45126877 45128877 + 12.9428915793023 NA promoter-TSS (NR_039581) promoter-TSS (NR_039581) -414 NR_000002 27209 NR_000002 ENSMUSG00000065219 Snord32a Rnu32|Rnu32a|U32|U32A small nucleolar RNA, C/D box 32A snoRNA common_peak1_36_410_-0.903210932470273_8.23138911744655_12.9397521441929 chr2 26408606 26409370 + 12.9397521441929 NA TTS (NM_153125) TTS (NM_153125) 139 NM_001290437 64436 Mm.330070 NM_033134 ENSMUSG00000026925 Inpp5e 1200002L24Rik|72kDa|mKIAA0123 inositol polyphosphate-5-phosphatase E protein-coding unique_peak2_24_292_-1.10874166228586_7.64038602327932_12.937019163498 chr2 163800146 163801760 + 12.937019163498 NA Intergenic Intergenic -19881 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak2_320_3742_-0.266874397390906_11.7365421342045_12.9352262951535 chr11 78342980 78348713 + 12.9352262951535 NA promoter-TSS (NM_001313986) promoter-TSS (NM_001313986) 262 NM_001313988 22248 Mm.284811 NM_011676 ENSMUSG00000002058 Unc119 D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h unc-119 lipid binding chaperone protein-coding common_peak2_195_2173_-0.356035365743912_10.9081185421554_12.9328392796351 chr15 103151381 103155305 + 12.9328392796351 NA TTS (NM_027885) TTS (NM_027885) -6515 NR_045743 432989 Mm.383979 NR_045743 ENSMUSG00000097003 D930007P13Rik - Riken cDNA D930007P13 gene ncRNA common_peak2_137_1493_-0.435756801356087_10.3270860321112_12.9310656547477 chr4 32125061 32127056 + 12.9310656547477 NA Intergenic L1_Mus1|LINE|L1 161951 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_35_399_-0.912558516715702_8.18757693141687_12.9305657840636 chr17 57010802 57011299 + 12.9305657840636 NA intron (NM_133801, intron 1 of 12) CpG 238 NM_133801 98053 Mm.24632 NM_133801 ENSMUSG00000002658 Gtf2f1 2810405L04Rik|C76800|RAP74 general transcription factor IIF, polypeptide 1 protein-coding common_peak2_78_331_0.747059659766391_8.74856926123012_12.9293621854114 chr15 51729977 51731647 + 12.9293621854114 NA Intergenic Intergenic 134649 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak1_75_311_0.768186606907355_8.66949552231593_12.9291769836376 chr4 98382731 98383478 + 12.9291769836376 NA exon (NM_053157, exon 1 of 7) exon (NM_053157, exon 1 of 7) 161 NM_053157 94043 Mm.331719 NM_053157 ENSMUSG00000028563 Tm2d1 2310026L18Rik|AA990549|Bbp TM2 domain containing 1 protein-coding common_peak1_292_3379_-0.281213867976698_11.5822005971812_12.9268663915309 chr11 69919854 69921400 + 12.9268663915309 NA promoter-TSS (NM_001166590) promoter-TSS (NM_001166590) 3 NM_001166590 276770 Mm.18026 NM_181582 ENSMUSG00000078812 Eif5a AA410058|D19Wsu54e|Eif4d|Eif5a1|eIF-4D|eIF-5A|eIF-5A-1|eIF-5A1 eukaryotic translation initiation factor 5A protein-coding common_peak1_201_1339_0.395443219446676_10.5857388950685_12.9252523806453 chr7 122288645 122290485 + 12.9252523806453 NA intron (NM_001316672, intron 1 of 16) CpG 440 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak2_46_510_-0.794048393511604_8.60015528418182_12.9227773325402 chr3 89244607 89247132 + 12.9227773325402 NA promoter-TSS (NM_183037) promoter-TSS (NM_183037) 28 NM_183037 360213 Mm.331156 NM_183037 ENSMUSG00000042766 Trim46 TRIFIC tripartite motif-containing 46 protein-coding common_peak1_170_1057_0.441509323589433_10.2678785739087_12.92273241301 chr2 12418388 12419907 + 12.92273241301 NA intron (NM_024185, intron 1 of 14) CpG 313 NM_024185 66960 Mm.34059 NM_024185 ENSMUSG00000026767 Fam188a 1810041E18Rik|2310047O13Rik|5830410F13Rik|AI447827|AW111958 family with sequence similarity 188, member A protein-coding common_peak1_32_370_-0.957955428959923_8.05629766214084_12.9227034475549 chr3 139042030 139042633 + 12.9227034475549 NA intron (NM_145544, intron 2 of 13) MTEb|LTR|ERVL-MaLR 32870 NM_145544 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding common_peak2_71_767_-0.627052516475777_9.27143624248327_12.9218123960639 chr4 129923951 129927224 + 12.9218123960639 NA Intergenic Intergenic 19361 NR_045190 319894 Mm.59196 NR_045190 ENSMUSG00000086369 E330017L17Rik - RIKEN cDNA E330017L17 gene ncRNA common_peak1_80_345_0.731713855356153_8.8004851553148_12.920423345433 chr17 27840084 27840833 + 12.920423345433 NA intron (NM_011432, intron 1 of 5) intron (NM_011432, intron 1 of 5) 371 NM_011432 20630 Mm.103949 NM_011432 ENSMUSG00000024217 Snrpc Snrp1c|U1-C|U1C U1 small nuclear ribonucleoprotein C protein-coding common_peak1_394_3358_0.256388597757139_11.8420103791131_12.9197040749162 chr19 45046602 45049370 + 12.9197040749162 NA intron (NM_001178013, intron 1 of 9) intron (NM_001178013, intron 1 of 9) 410 NM_001178013 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak2_91_981_-0.547893787848469_9.66563232039046_12.9180336065223 chr4 133840394 133844311 + 12.9180336065223 NA Intergenic Intergenic 32379 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak1_70_757_-0.632894492324075_9.24960679200905_12.9165367513438 chr7 30562397 30563186 + 12.9165367513438 NA promoter-TSS (NM_170760) promoter-TSS (NM_170760) 393 NM_025498 66340 Mm.86557 NM_025498 ENSMUSG00000036835 Psenen 1700023M09Rik|Pen-2 presenilin enhancer gamma secretase subunit protein-coding common_peak2_110_1189_-0.492827690830611_9.97033201278_12.9150418473827 chr17 27027009 27029035 + 12.9150418473827 NA intron (NM_007523, intron 1 of 5) intron (NM_007523, intron 1 of 5) 604 NM_007523 12018 Mm.2443 NM_007523 ENSMUSG00000057789 Bak1 Bak|N-BAK1|N-Bak BCL2-antagonist/killer 1 protein-coding common_peak1_47_143_1.07046277783614_7.70515639036038_12.9143233101844 chr17 13760569 13761394 + 12.9143233101844 NA intron (NM_010806, intron 1 of 32) CpG 413 NM_022311 21646 Mm.486358 NM_022311 ENSMUSG00000038347 Tcte2 AI429268|Tcte-2 t-complex-associated testis expressed 2 protein-coding common_peak2_245_2785_-0.311789450196187_11.2880848175032_12.913819275644 chr17 35978338 35981306 + 12.913819275644 NA promoter-TSS (NM_008136) promoter-TSS (NM_008136) 3 NM_001282013 75210 Mm.40036 NM_145487 ENSMUSG00000038500 Prr3 4930540G07Rik|Cat56 proline-rich polypeptide 3 protein-coding common_peak1_79_852_-0.592043081314802_9.44038039066089_12.913303299866 chr7 106215397 106216557 + 12.913303299866 NA promoter-TSS (NM_001243039).2 promoter-TSS (NM_001243039).2 -637 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding unique_peak2_10_157_-1.67059531666951_6.46848308984235_12.9131232335768 chr4 59530594 59531389 + 12.9131232335768 NA intron (NM_178164, intron 1 of 13) intron (NM_178164, intron 1 of 13) 18373 NM_178164 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding unique_peak2_0_56_-4.443085995785_3.61134701627224_12.9114243294586 chrY 20663670 20664193 + 12.9114243294586 NA Intergenic RLTR4_Mm|LTR|ERV1 -431400 NM_009220 20611 Mm.347498 NM_009220 ENSMUSG00000095267 Ssty1 Smy|Ssty spermiogenesis specific transcript on the Y 1 protein-coding common_peak1_382_3222_0.261421823868874_11.784899384994_12.9113043745304 chr10 43995789 43999214 + 12.9113043745304 NA exon (NM_172393, exon 2 of 20) exon (NM_172393, exon 2 of 20) 7345 NM_172393 11630 Mm.292082 NM_172393 ENSMUSG00000019866 Aim1 AI462491|AI463325 absent in melanoma 1 protein-coding common_peak2_160_1757_-0.397722441784426_10.5808581342512_12.9105835500153 chr15 102516763 102520007 + 12.9105835500153 NA 5' UTR (NM_009319, exon 1 of 9) 5' UTR (NM_009319, exon 1 of 9) 193 NM_009319 21357 Mm.291485 NM_009319 ENSMUSG00000023051 Tarbp2 Prbp|TRBP TARBP2, RISC loading complex RNA binding subunit protein-coding common_peak2_222_1538_0.370706357626194_10.7731306951413_12.9105029492004 chr1 125559702 125561678 + 12.9105029492004 NA promoter-TSS (NM_028787) promoter-TSS (NM_028787) -326 NM_028787 74150 Mm.28654 NM_028787 ENSMUSG00000026342 Slc35f5 1300003P13Rik|AI646727 solute carrier family 35, member F5 protein-coding common_peak2_109_553_0.594161163523083_9.41082274781073_12.9097201939014 chr16 16870141 16871889 + 12.9097201939014 NA 5' UTR (NM_011624, exon 1 of 18) 5' UTR (NM_011624, exon 1 of 18) 124 NM_011624 21976 Mm.326089 NM_011624 ENSMUSG00000022779 Top3b - topoisomerase (DNA) III beta protein-coding common_peak1_158_1734_-0.400843665869226_10.560298114531_12.9082879778629 chr1 86262520 86264106 + 12.9082879778629 NA intron (NM_001310702, intron 23 of 24) intron (NM_001310702, intron 23 of 24) -39908 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak1_62_673_-0.674995621230076_9.05910697056682_12.9064072784159 chr3 60485615 60486714 + 12.9064072784159 NA intron (NM_001253713, intron 2 of 9) intron (NM_001253713, intron 2 of 9) 13334 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_74_799_-0.613706481485059_9.3370029490322_12.9059605051114 chr2 32395317 32396757 + 12.9059605051114 NA 5' UTR (NM_133783, exon 1 of 7) 5' UTR (NM_133783, exon 1 of 7) 147 NM_133783 96979 Mm.28048 NM_133783 ENSMUSG00000026820 Ptges2 0610038H10Rik|C79137|Gbf1|Mpges2|Pges2 prostaglandin E synthase 2 protein-coding common_peak1_53_580_-0.733574475378578_8.81560711571524_12.9056079426669 chr1 151682507 151683302 + 12.9056079426669 NA intron (NM_022018, intron 5 of 13) intron (NM_022018, intron 5 of 13) -72470 NM_001311165 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding common_peak1_116_607_0.56915045231756_9.53250273960236_12.9050629767594 chr5 150593689 150595094 + 12.9050629767594 NA exon (NM_133898, exon 1 of 5) exon (NM_133898, exon 1 of 5) 134 NM_133898 100637 Mm.279932 NM_133898 ENSMUSG00000041132 N4bp2l1 2410024N18Rik|AI428195|B230342M21Rik NEDD4 binding protein 2-like 1 protein-coding common_peak1_105_1133_-0.50485084831276_9.89477950078585_12.9025863080397 chr6 35252413 35253389 + 12.9025863080397 NA non-coding (NR_027875, exon 1 of 3) non-coding (NR_027875, exon 1 of 3) 169 NR_027875 67705 Mm.228046 NR_015608 ENSMUSG00000073155 1810058I24Rik AI414869|AI848234 RIKEN cDNA 1810058I24 gene ncRNA common_peak2_63_683_-0.668374629388017_9.08366520019189_12.8990737788539 chr13 101718547 101720597 + 12.8990737788539 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) -26942 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_100_1078_-0.518630955882559_9.81616367154674_12.8942349162107 chr11 106199904 106203309 + 12.8942349162107 NA intron (NM_026009, intron 12 of 12) Lx9|LINE|L1 -8003 NM_001252449 72149 Mm.403722 NM_028126 ENSMUSG00000069631 Strada 2610019A05Rik|6030402H20Rik|AI480680|E130112C09Rik STE20-related kinase adaptor alpha protein-coding common_peak1_100_486_0.629070231523116_9.2423130778439_12.8936899639965 chr6 122339210 122340651 + 12.8936899639965 NA promoter-TSS (NM_001042623) promoter-TSS (NM_001042623) -273 NM_007905 13619 Mm.6822 NM_007905 ENSMUSG00000040669 Phc1 AW557034|Edr|Edr1|Mph1|Rae-28|rae28 polyhomeotic-like 1 (Drosophila) protein-coding common_peak2_469_4236_0.229021572126802_12.1633381994273_12.8895375488604 chr17 34586091 34592749 + 12.8895375488604 NA promoter-TSS (NM_134116) promoter-TSS (NM_134116) -386 NM_134116 106512 Mm.26584 NM_134116 ENSMUSG00000034786 Gpsm3 AA960287|AGS4 G-protein signalling modulator 3 (AGS3-like, C. elegans) protein-coding common_peak2_95_450_0.650016467209428_9.14199185686009_12.8884308425543 chr4 119889131 119890813 + 12.8884308425543 NA intron (NM_010657, intron 1 of 8) intron (NM_010657, intron 1 of 8) 75294 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding unique_peak2_17_224_-1.30909582934437_7.15923327654485_12.8859769941658 chr5 123572366 123573241 + 12.8859769941658 NA intron (NM_029929, intron 1 of 12) CpG 212 NM_029929 77573 Mm.41372 NM_029929 ENSMUSG00000029434 Vps33a 3830421M04Rik|AI503300|AW048546|AW554476|bf VPS33A CORVET/HOPS core subunit protein-coding common_peak1_203_2268_-0.346945494172168_10.9743681465863_12.8848653378353 chr16 32077933 32079391 + 12.8848653378353 NA intron (NM_177326, intron 1 of 14) intron (NM_177326, intron 1 of 14) 680 NM_177326 224105 Mm.234204 NM_177326 ENSMUSG00000022781 Pak2 5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182 p21 protein (Cdc42/Rac)-activated kinase 2 protein-coding common_peak1_34_389_-0.925884599226077_8.14438801413657_12.8836355333696 chr3 95133364 95134086 + 12.8836355333696 NA promoter-TSS (NM_153121) promoter-TSS (NM_153121) 287 NM_027013 69269 Mm.182944 NM_027013 ENSMUSG00000092607 Scnm1 3110001I17Rik|Scnm1-ps sodium channel modifier 1 protein-coding common_peak1_108_1166_-0.496846610177712_9.94016554061849_12.8833312370748 chr5 37044825 37046292 + 12.8833312370748 NA Intergenic Intergenic -5299 NM_178394 76071 Mm.85280 NM_178394 ENSMUSG00000063646 Jakmip1 5830437M04Rik|C330021K24Rik|Gababrbp|Marlin-1 janus kinase and microtubule interacting protein 1 protein-coding unique_peak1_15_11_2.71129076240401_4.94060788192316_12.8797635045684-2 chr17 87248029 87248415 + 12.8797635045684 NA Intergenic RLTR11A2|LTR|ERVK 17725 NM_176808 193813 Mm.30251 NM_139295 ENSMUSG00000024150 Mcfd2 1810021C21Rik|F5f8d|Lman1ip|Sdnsf multiple coagulation factor deficiency 2 protein-coding unique_peak1_15_11_2.71129076240401_4.94060788192316_12.8797635045684 chr15 50402157 50402553 + 12.8797635045684 NA Intergenic MLT1A0|LTR|ERVL-MaLR 486694 NM_001310481 83925 Mm.30466 NM_032000 ENSMUSG00000038679 Trps1 AI115454|AI447310|D15Ertd586e trichorhinophalangeal syndrome I (human) protein-coding unique_peak1_15_11_2.71129076240401_4.94060788192316_12.8797635045684-3 chr18 62191201 62191608 + 12.8797635045684 NA Intergenic Intergenic -11423 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak2_127_694_0.535221029073366_9.70847968214755_12.8791645082791 chr4 101198743 101202956 + 12.8791645082791 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 64433 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_151_893_0.476070115772639_10.0421660790696_12.876772813818 chr9 123112112 123114172 + 12.876772813818 NA promoter-TSS (NM_001081188) promoter-TSS (NM_001081188) 63 NM_026917 69035 Mm.28300 NM_026917 ENSMUSG00000025786 Zdhhc3 1110020O22Rik|1810006O10Rik|2210017C02Rik|DHHC-3|GODZ|Gramp1|Zfp373 zinc finger, DHHC domain containing 3 protein-coding common_peak1_212_2377_-0.338238937745356_11.046413530873_12.8757529894331 chr9 57071821 57074688 + 12.8757529894331 NA intron (NM_001110351, intron 1 of 21) CpG 1214 NM_001110351 20466 Mm.15755 NM_011378 ENSMUSG00000042557 Sin3a AW553200|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) protein-coding common_peak1_163_996_0.453218193039943_10.1880587909182_12.8755944647497 chr11 34766741 34768285 + 12.8755944647497 NA intron (NM_033374, intron 1 of 51) (CAGCC)n|Simple_repeat|Simple_repeat 16392 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding common_peak1_15_205_-1.39024726405805_6.99137689515419_12.8732219192505 chr7 67644765 67645307 + 12.8732219192505 NA intron (NM_175124, intron 1 of 9) intron (NM_175124, intron 1 of 9) 200 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak1_34_79_1.35951761963617_7.00168690470545_12.8732219192504 chr2 22816532 22817197 + 12.8732219192504 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 42537 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak1_45_499_-0.800711169382222_8.56542869997098_12.872762029306-2 chr5 115521370 115522043 + 12.872762029306 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 15030 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak1_45_499_-0.800711169382222_8.56542869997098_12.872762029306 chr3 40949836 40950514 + 12.872762029306 NA promoter-TSS (NM_001040399) promoter-TSS (NM_001040399) -456 NM_001040399 214048 Mm.46782 NM_027663 ENSMUSG00000025762 Larp1b 1700108L22Rik|4933421B21Rik|AA690246|Larp2 La ribonucleoprotein domain family, member 1B protein-coding common_peak1_176_1111_0.430719848471602_10.3343009969593_12.8725616486175 chr19 5816896 5818414 + 12.8725616486175 NA Intergenic Intergenic -14984 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak1_20_253_-1.21121004297367_7.38307966528533_12.871500758467 chr6 54849748 54850225 + 12.871500758467 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 33070 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_64_694_-0.663954647277974_9.10889184397188_12.8709240896862 chrX 103621707 103622608 + 12.8709240896862 NA intron (NR_028380, intron 1 of 10) intron (NR_028380, intron 1 of 10) 1597 NR_028381 78878 Mm.259724 NR_028380 ENSMUSG00000086370 Ftx B230206F22Rik|BB219131|NCRNA00182|Thcytx Ftx transcript, Xist regulator (non-protein coding) ncRNA common_peak2_196_2183_-0.353650524294553_10.9159318787726_12.8676027898128 chrX 35887730 35893495 + 12.8676027898128 NA intron (NM_001009947, intron 1 of 52) intron (NM_001009947, intron 1 of 52) 1780 NM_001009947 75974 Mm.32873 NM_177745 ENSMUSG00000031093 Dock11 5033414A21Rik|8030476J24|Zizimin2|sph238 dedicator of cytokinesis 11 protein-coding common_peak2_215_1472_0.377502785362815_10.7132931077173_12.8657267667285 chr10 117375271 117377807 + 12.8657267667285 NA intron (NM_001310609, intron 1 of 9) CpG 434 NM_001013391 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding common_peak1_50_160_1.01675389901284_7.83929382762104_12.8645158739805 chr2 177839743 177840600 + 12.8645158739805 NA intron (NM_001024849, intron 1 of 3) RMER17B|LTR|ERVK 147 NM_001024849 329575 Mm.425123 NM_001024849 ENSMUSG00000095362 Gm14325 OTTMUSG00000016325 predicted gene 14325 protein-coding common_peak2_114_1232_-0.48139069343101_10.0272617376873_12.8637279596808 chr14 32084660 32086487 + 12.8637279596808 NA promoter-TSS (NM_145460) promoter-TSS (NM_145460) 119 NR_104303 105638 Mm.2519 NM_172254 ENSMUSG00000021905 Dph3 DELGIP1|DelgipP1|Desr1|KTI11|Zcsl2 diphthamine biosynthesis 3 protein-coding common_peak2_144_834_0.491136514029474_9.95120064437615_12.8625666812786 chr14 26206059 26207476 + 12.8625666812786 NA promoter-TSS (NM_001270496) promoter-TSS (NM_001270496) -148 NM_025311 66039 Mm.33344 NM_025311 ENSMUSG00000072676 Tmem254a 0610008K04Rik|0610010A22Rik|AA960404|D14Ertd449e|Tmem254 transmembrane protein 254a protein-coding common_peak2_261_1924_0.333056842563604_11.0771711517514_12.861474085358 chr4 40969953 40971998 + 12.861474085358 NA promoter-TSS (NM_001290449) promoter-TSS (NM_001290449) 32 NM_023739 74164 Mm.247456 NM_023739 ENSMUSG00000028423 Nfx1 1300017N15Rik|3000003M19Rik|NFX.1|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding common_peak2_177_1956_-0.37479736067626_10.7470293602887_12.8577763218041 chr4 62590852 62595338 + 12.8577763218041 NA intron (NM_019492, intron 3 of 19) L1_Mus1|LINE|L1 -26577 NM_001081650 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_45_133_1.09898392482209_7.61558115286882_12.8532988186962 chr13 51743867 51744765 + 12.8532988186962 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 49431 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_170_1058_0.440146361711122_10.2685600548479_12.8510592631727 chr6 29608812 29610647 + 12.8510592631727 NA promoter-TSS (NM_177296) promoter-TSS (NM_177296) -122 NM_177296 320938 Mm.276381 NM_177296 ENSMUSG00000012535 Tnpo3 5730544L10Rik|C430013M08Rik|C81142|D6Ertd313e|Trn-SR|mKIAA4133 transportin 3 protein-coding common_peak2_93_436_0.658253929111776_9.10061643405649_12.8505593228575 chr13 111685614 111687284 + 12.8505593228575 NA intron (NM_172593, intron 1 of 12) CpG 271 NM_172593 218613 Mm.31012 NM_172593 ENSMUSG00000032727 Mier3 5730509D14|AU015422|D130064H19Rik MIER family member 3 protein-coding common_peak2_59_642_-0.693406183543887_8.981971835556_12.8485033210041 chr13 60838772 60840687 + 12.8485033210041 NA Intergenic Intergenic 24687 NM_178098 214639 Mm.19839 NM_178098 ENSMUSG00000050345 4930486L24Rik AW545031 RIKEN cDNA 4930486L24 gene protein-coding common_peak2_129_711_0.527793400552854_9.73963013124283_12.8467902211498 chr18 37997493 37999986 + 12.8467902211498 NA 5' UTR (NM_001205336, exon 1 of 33) 5' UTR (NM_001205336, exon 1 of 33) 230 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding unique_peak1_20_25_2.07703492565741_5.73895718096979_12.8467162476813-2 chr7 90381586 90382024 + 12.8467162476813 NA intron (NM_001289583, intron 8 of 19) intron (NM_001289583, intron 8 of 19) -5176 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak1_20_25_2.07703492565741_5.73895718096979_12.8467162476813 chr18 77953967 77954461 + 12.8467162476813 NA exon (NM_001195633, exon 4 of 44) exon (NM_001195633, exon 4 of 44) 15747 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak1_66_254_0.836190263290866_8.41244856850429_12.8460656770827 chr8 22397897 22398896 + 12.8460656770827 NA promoter-TSS (NR_045473) promoter-TSS (NR_045473) 225 NM_181325 18408 Mm.200907 NM_181325 ENSMUSG00000031482 Slc25a15 D630044L02Rik|Ornt1 solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 protein-coding unique_peak2_29_340_-1.00497149642647_7.91114218081094_12.8446864030203 chr16 58544764 58547335 + 12.8446864030203 NA Intergenic Intergenic -22737 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding unique_peak2_29_340_-1.00497149642647_7.91114218081094_12.8446864030203-2 chr8 94702563 94704008 + 12.8446864030203 NA Intergenic AT_rich|Low_complexity|Low_complexity -7043 NM_026385 67801 Mm.279977 NM_026385 ENSMUSG00000031775 Pllp 0610010I06Rik|AV001002|Plapi|Tm4sf11 plasma membrane proteolipid protein-coding common_peak1_51_560_-0.749823404781505_8.75694525821804_12.8427193542475 chr13 53065846 53066448 + 12.8427193542475 NA Intergenic MTD|LTR|ERVL-MaLR -85108 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding unique_peak2_18_233_-1.27000051618651_7.23536446149015_12.842116227963 chr5 34520438 34521725 + 12.842116227963 NA Intergenic Intergenic -4703 NM_011893 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak1_489_4478_0.222633184119664_12.2402775429155_12.8335267450661 chr5 109556271 109559326 + 12.8335267450661 NA intron (NM_001310694, intron 1 of 7) intron (NM_001310694, intron 1 of 7) 1195 NM_016715 57914 Mm.35771 NM_016715 ENSMUSG00000033467 Crlf2 CRLM2|Ly114|Tpte2|Tslpr cytokine receptor-like factor 2 protein-coding common_peak1_73_787_-0.615655857058609_9.31422389092707_12.8334490580355 chr13 45871969 45873144 + 12.8334490580355 NA intron (NM_009124, intron 2 of 7) intron (NM_009124, intron 2 of 7) 92435 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_84_373_0.704747387964854_8.89926815387006_12.8320013255769 chr17 25985001 25986240 + 12.8320013255769 NA Intergenic CpG -20115 NM_015830 50817 Mm.216072 NM_015830 ENSMUSG00000037326 Capn15 Solh calpain 15 protein-coding common_peak1_28_330_-1.02202409229465_7.85967536065989_12.8314663318805 chr4 88760170 88760698 + 12.8314663318805 NA promoter-TSS (NM_001085531) promoter-TSS (NM_001085531) -340 NM_001085531 545645 Mm.489553 NM_001085531 ENSMUSG00000100505 Gm13283 EG545645|OTTMUSG00000011280 predicted gene 13283 protein-coding common_peak1_26_310_-1.05856320329101_7.7514891684851_12.828654425882 chr15 38517622 38518226 + 12.828654425882 NA intron (NM_018745, intron 1 of 11) intron (NM_018745, intron 1 of 11) 1342 NM_001301688 54375 Mm.250214 NM_018745 ENSMUSG00000037458 Azin1 1700085L02Rik|AZI|Oazi|Oazin antizyme inhibitor 1 protein-coding common_peak2_76_819_-0.602758558732379_9.37810082013926_12.8276982497409 chr4 6370480 6374232 + 12.8276982497409 NA intron (NM_016807, intron 1 of 8) L1MB5|LINE|L1 6676 NM_001098227 53378 Mm.247473 NM_016807 ENSMUSG00000028249 Sdcbp MDA-9|Sycl|syntenin-1 syndecan binding protein protein-coding common_peak1_74_798_-0.61190198463831_9.33610070060882_12.8237227744591 chr9 106429542 106430425 + 12.8237227744591 NA exon (NM_009082, exon 2 of 4) exon (NM_009082, exon 2 of 4) 444 NM_009082 19944 Mm.288696 NM_009082 ENSMUSG00000048758 Rpl29 Rpl43 ribosomal protein L29 protein-coding common_peak2_288_2202_0.312014723867717_11.2612611416347_12.8206857147419 chr11 40691216 40695386 + 12.8206857147419 NA promoter-TSS (NM_134017) promoter-TSS (NM_134017) -619 NM_134017 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak1_46_509_-0.791222349432841_8.59874226214244_12.8201292387181 chr17 26514946 26515754 + 12.8201292387181 NA Intergenic MLT1C|LTR|ERVL-MaLR -6878 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_49_539_-0.764188093728091_8.69472155018679_12.8173404822168 chr17 46152998 46153675 + 12.8173404822168 NA intron (NM_025649, intron 1 of 2) intron (NM_025649, intron 1 of 2) 215 NM_025649 66591 Mm.272024 NM_025649 ENSMUSG00000034509 Mad2l1bp 0610009D16Rik|2510031P20Rik|AU018945|AW550977|C76045|CMT2A|CMT2B|Mad2lbp|mKIAA0110 MAD2L1 binding protein protein-coding common_peak1_88_947_-0.55572488013407_9.61088080883122_12.8168722131425 chr2 13413724 13414727 + 12.8168722131425 NA intron (NM_001081084, intron 27 of 66) B4A|SINE|B4 77651 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak2_14_195_-1.43266572270386_6.89837698276328_12.8162620383799 chr18 47582858 47584045 + 12.8162620383799 NA intron (NR_033454, intron 1 of 5) intron (NR_033454, intron 1 of 5) 45716 NR_033454 328953 Mm.246768 NR_033454 Gm5095 A730092B10 predicted gene 5095 ncRNA common_peak2_326_2605_0.288255383114787_11.4917490601255_12.8144007940775 chr13 43478322 43482372 + 12.8144007940775 NA intron (NM_019930, intron 1 of 13) intron (NM_019930, intron 1 of 13) 626 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak2_43_123_1.13221374349343_7.52030318213359_12.8130961148328 chr5 31870668 31871330 + 12.8130961148328 NA intron (NM_181279, intron 8 of 13) MTEa|LTR|ERVL-MaLR 172949 NM_181282 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Bre 6030405P19Rik|AI429776|B830038C02Rik brain and reproductive organ-expressed protein protein-coding common_peak2_199_2218_-0.349841826501558_10.9407730389462_12.8111416492087 chr4 45407272 45410013 + 12.8111416492087 NA intron (NM_001009949, intron 1 of 2) CpG 124 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak2_634_6302_0.188493333658164_12.7160696142233_12.8083582033379 chr17 84327767 84336936 + 12.8083582033379 NA intron (NM_183021, intron 28 of 37) MLTR11A|LTR|ERVK 133857 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak1_282_3248_-0.285637938886719_11.5229610588861_12.8033142549396 chr8 128644981 128647606 + 12.8033142549396 NA Intergenic MLT1J2|LTR|ERVL-MaLR -39361 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding unique_peak2_47_518_-0.77920294907943_8.62998925381817_12.8031798065712 chr19 23281415 23283136 + 12.8031798065712 NA Intergenic Intergenic -8378 NM_001252684 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding common_peak1_47_518_-0.77920294907943_8.62998925381817_12.8031798065712 chr1 182363120 182363934 + 12.8031798065712 NA Intergenic Intergenic -21921 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_175_1931_-0.376244702582754_10.7277570275444_12.8002918555412 chr13 81783090 81784283 + 12.8002918555412 NA intron (NM_007684, intron 1 of 4) CpG 394 NM_007684 12626 Mm.12481 NM_007684 ENSMUSG00000021537 Cetn3 MmCEN3 centrin 3 protein-coding common_peak1_41_113_1.17119694082011_7.4184884845748_12.7981672963181 chr6 85068775 85069667 + 12.7981672963181 NA intron (NM_177077, intron 1 of 21) CpG 292 NM_177077 75914 Mm.159621 NM_177077 ENSMUSG00000033769 Exoc6b 4930569O18Rik|G430127E12Rik|Sec15b|Sec15l2|mKIAA0919 exocyst complex component 6B protein-coding common_peak1_52_171_0.989477010741014_7.92100326007261_12.7937458694971 chr11 117337710 117338820 + 12.7937458694971 NA intron (NM_001113488, intron 1 of 9) B4A|SINE|B4 5952 NM_001113488 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_207_1397_0.386109532824564_10.6422034117877_12.7918545499734 chr1 43445164 43448145 + 12.7918545499734 NA intron (NM_010879, intron 1 of 4) intron (NM_010879, intron 1 of 4) 903 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak2_76_319_0.754793445885705_8.69932481783021_12.7875267396306 chr2 10047852 10049269 + 12.7875267396306 NA promoter-TSS (NM_027748) promoter-TSS (NM_027748) 49 NM_027748 209361 Mm.86343 NM_027748 ENSMUSG00000025782 Taf3 140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140 TATA-box binding protein associated factor 3 protein-coding common_peak1_117_1265_-0.47392297320016_10.0691002028283_12.7853378616782 chr5 45294119 45295881 + 12.7853378616782 NA intron (NR_131933, intron 4 of 5) MLT2B2|LTR|ERVL 129400 NR_131933 52401 Mm.33854 NR_131933 ENSMUSG00000029092 D5Ertd615e 4930435H24Rik DNA segment, Chr 5, ERATO Doi 615, expressed ncRNA common_peak1_179_1139_0.424585150885239_10.3671106844947_12.7841558609931 chr3 79286060 79287917 + 12.7841558609931 NA Intergenic CpG -58388 NM_001142953 100233207 Mm.373801 NM_001142953 ENSMUSG00000091685 Gm17359 - predicted gene, 17359 protein-coding common_peak1_25_301_-1.08298349468415_7.69691299198301_12.7818778708311 chr19 53184220 53184775 + 12.7818778708311 NA intron (NM_013758, intron 1 of 15) intron (NM_013758, intron 1 of 15) 40500 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak2_25_301_-1.08298349468415_7.69691299198301_12.7818778708311 chr14 20681797 20683147 + 12.7818778708311 NA intron (NM_172596, intron 3 of 22) intron (NM_172596, intron 3 of 22) 8151 NM_001168273 218811 Mm.173119 NM_172596 ENSMUSG00000039367 Sec24c 2610204K03Rik|mKIAA0079 Sec24 related gene family, member C (S. cerevisiae) protein-coding common_peak2_541_5119_0.208151749646401_12.4260039697106_12.7813232954324 chr1 191394071 191398498 + 12.7813232954324 NA exon (NM_144880, exon 1 of 13) exon (NM_144880, exon 1 of 13) 757 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak2_170_1059_0.438784686252896_10.269240892577_12.7796225337449 chr1 43127108 43131156 + 12.7796225337449 NA intron (NM_001289533, intron 4 of 5) intron (NM_001289533, intron 4 of 5) 30422 NM_133818 98404 Mm.28817 NM_133818 ENSMUSG00000010290 AI597479 - expressed sequence AI597479 protein-coding common_peak1_33_75_1.38222105871694_6.93903804280206_12.779118595965 chr2 31164253 31164849 + 12.779118595965 NA intron (NM_178760, intron 1 of 17) PB1D9|SINE|Alu 12235 NM_178760 277463 Mm.236074 NM_178760 ENSMUSG00000000194 Gpr107 9930033D15Rik|AI790205|C530034M11|mKIAA1624 G protein-coupled receptor 107 protein-coding common_peak1_108_547_0.593710152569109_9.39488715924508_12.7785971801841 chr5 110807697 110809167 + 12.7785971801841 NA intron (NM_009469, intron 3 of 27) intron (NM_009469, intron 3 of 27) 1649 NM_009469 22241 Mm.271898 NM_009469 ENSMUSG00000029512 Ulk1 AU041434|Unc51.1|mKIAA0722 unc-51 like kinase 1 protein-coding common_peak1_84_904_-0.570132134118076_9.53670791491153_12.7773289388502 chr2 126706827 126707922 + 12.7773289388502 NA promoter-TSS (NM_019729) promoter-TSS (NM_019729) 46 NM_019729 84092 Mm.272629 NM_019729 ENSMUSG00000027363 Usp8 AI574262|AW557536|Ubpy|mKIAA0055 ubiquitin specific peptidase 8 protein-coding common_peak1_177_1121_0.427773719341751_10.3457438202797_12.7762546042011 chr2 51972170 51973579 + 12.7762546042011 NA intron (NM_001141949, intron 1 of 8) CpG 334 NM_001141949 64685 Mm.7491 NM_019401 ENSMUSG00000026946 Nmi - N-myc (and STAT) interactor protein-coding common_peak2_177_1121_0.427773719341751_10.3457438202797_12.7762546042011 chr19 6919889 6922912 + 12.7762546042011 NA intron (NM_007953, intron 1 of 6) intron (NM_007953, intron 1 of 6) 408 NM_007953 26379 Mm.386776 NM_007953 ENSMUSG00000024955 Esrra ERRalpha|Err1|Estrra|Nr3b1 estrogen related receptor, alpha protein-coding common_peak2_188_2085_-0.3607797664147_10.8461335593124_12.7755272044127 chr7 118242203 118244805 + 12.7755272044127 NA promoter-TSS (NR_027879) promoter-TSS (NR_027879) 133 NM_001031814 233789 Mm.309053 NM_177180 ENSMUSG00000030655 Smg1 2610207I05Rik|5430435M13Rik|C130002K18Rik|mKIAA0421 SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) protein-coding common_peak2_113_1220_-0.482736454250873_10.012479257862_12.7726641058286 chr11 97717720 97720281 + 12.7726641058286 NA intron (NM_054051, intron 9 of 9) intron (NM_054051, intron 9 of 9) 15566 NM_011971 26446 Mm.21874 NM_011971 ENSMUSG00000069744 Psmb3 AL033320|C10-II proteasome (prosome, macropain) subunit, beta type 3 protein-coding unique_peak2_31_359_-0.96898752201815_8.0073593353206_12.7693966478331 chr11 121103506 121105424 + 12.7693966478331 NA Intergenic Intergenic 14212 NM_027622 70956 Mm.158506 NM_027622 ENSMUSG00000039337 Tex19.2 4921530G04Rik|Tex19b testis expressed gene 19.2 protein-coding common_peak1_37_418_-0.883829919116105_8.2688914741413_12.7689166239878 chr6 48801285 48801965 + 12.7689166239878 NA Intergenic T-rich|Low_complexity|Low_complexity -30774 NM_031247 83408 Mm.333050 NM_031247 ENSMUSG00000039264 Gimap3 2010110D23Rik|Gimap5|Ian4 GTPase, IMAP family member 3 protein-coding common_peak1_134_752_0.513807099045987_9.81340960419492_12.7664212560824 chr3 84581879 84583564 + 12.7664212560824 NA promoter-TSS (NM_001081093) promoter-TSS (NM_001081093) -96 NM_001293801 99889 Mm.316536 NM_001081093 ENSMUSG00000074513 Arfip1 2310030I10Rik|Arfaptin|D3Ertd598e ADP-ribosylation factor interacting protein 1 protein-coding unique_peak2_2_76_-2.93284800616187_4.80036253761396_12.7645758291597 chr4 101171339 101172180 + 12.7645758291597 NA intron (NM_146145, intron 10 of 24) Lx8|LINE|L1 93523 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_96_1033_-0.528682106951525_9.74967941683917_12.759803950197 chr18 36678263 36679549 + 12.759803950197 NA promoter-TSS (NM_001083317) promoter-TSS (NM_001083317) -309 NM_001083317 67843 Mm.273350 NM_026404 ENSMUSG00000033272 Slc35a4 2610030J16Rik solute carrier family 35, member A4 protein-coding common_peak1_55_599_-0.7156416292916_8.87099787585008_12.7592472712238 chr7 43440186 43440997 + 12.7592472712238 NA promoter-TSS (NM_028849) promoter-TSS (NM_028849) -225 NM_028849 74276 Mm.159153 NM_028849 ENSMUSG00000038973 Cldnd2 1700071E18Rik claudin domain containing 2 protein-coding unique_peak2_55_599_-0.7156416292916_8.87099787585008_12.7592472712238 chr1 120844998 120847613 + 12.7592472712238 NA Intergenic ORR1A4|LTR|ERVL-MaLR -241100 NR_038008 98452 Mm.131017 NR_038008 ENSMUSG00000097881 Celrr AI848258|B230209K01Rik|Celr|Gm818 cerebellum expressed regulatory RNA ncRNA common_peak2_94_444_0.650808264421451_9.12306565806449_12.75905827491 chr15 81744682 81746466 + 12.75905827491 NA intron (NM_001081016, intron 1 of 22) intron (NM_001081016, intron 1 of 22) 726 NM_001081016 20286 Mm.432075 NM_001081016 ENSMUSG00000022390 Zc3h7b Gm627|Scrg3|Zc2h7b|mKIAA1031 zinc finger CCCH type containing 7B protein-coding common_peak2_67_724_-0.645076301555413_9.17929903412459_12.757798262205 chr11 54859771 54861652 + 12.757798262205 NA promoter-TSS (NM_029327) promoter-TSS (NM_029327) -120 NM_029327 75530 Mm.83578 NM_029327 ENSMUSG00000020268 Lyrm7 1700024C24Rik|9330147L21Rik LYR motif containing 7 protein-coding common_peak1_67_724_-0.645076301555413_9.17929903412459_12.757798262205 chr2 152669502 152670415 + 12.757798262205 NA intron (NM_010376, intron 1 of 11) intron (NM_010376, intron 1 of 11) 497 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak1_18_19_2.27843610850953_5.46114614914213_12.7565593842928 chr12 102667018 102667474 + 12.7565593842928 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 17774 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA unique_peak2_4_97_-2.37680023885714_5.42630972468664_12.7565593842927 chr7 112052971 112053731 + 12.7565593842927 NA exon (NM_177249, exon 3 of 29) exon (NM_177249, exon 3 of 29) 29845 NM_177249 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding common_peak1_80_861_-0.58520197609622_9.45894307104099_12.7530521618551 chr18 34624016 34624922 + 12.7530521618551 NA promoter-TSS (NM_001166406) promoter-TSS (NM_001166406) -155 NM_001166407 19348 Mm.258846 NM_009004 ENSMUSG00000003779 Kif20a AA415432|Rab6kifl kinesin family member 20A protein-coding common_peak2_49_155_1.02722528446049_7.79901486109249_12.7521357471872 chr4 119877874 119878976 + 12.7521357471872 NA intron (NM_010657, intron 1 of 8) ORR1E|LTR|ERVL-MaLR 63747 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak2_108_1164_-0.494372004012007_9.93892823753564_12.7471981333786 chr7 140137045 140138826 + 12.7471981333786 NA intron (NM_199301, intron 1 of 10) intron (NM_199301, intron 1 of 10) 371 NM_199301 212508 Mm.296088 NM_199301 ENSMUSG00000039018 Mtg1 Gm169|Gtpbp7 mitochondrial ribosome-associated GTPase 1 protein-coding common_peak1_60_651_-0.684208703184105_9.00662380263902_12.7452670187761 chr19 4000266 4000896 + 12.7452670187761 NA promoter-TSS (NM_025529) promoter-TSS (NM_025529) 1 NM_025529 66387 Mm.259222 NM_025529 ENSMUSG00000024869 Nudt8 2310039H17Rik nudix (nucleoside diphosphate linked moiety X)-type motif 8 protein-coding common_peak1_51_559_-0.747249461117679_8.75565828638613_12.7449838597005 chr7 67531472 67532482 + 12.7449838597005 NA intron (NM_175124, intron 7 of 9) intron (NM_175124, intron 7 of 9) 113259 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak2_51_559_-0.747249461117679_8.75565828638613_12.7449838597005 chr17 12959947 12961310 + 12.7449838597005 NA promoter-TSS (NM_009338) promoter-TSS (NM_009338) 97 NM_009338 110460 Mm.439711 NM_009338 ENSMUSG00000023832 Acat2 AW742799|Tcp-1x|Tcp1-rs1 acetyl-Coenzyme A acetyltransferase 2 protein-coding unique_peak1_23_35_1.84385046664978_6.0918502347672_12.7440123855972 chr14 73380121 73380638 + 12.7440123855972 NA intron (NM_008410, intron 1 of 5) intron (NM_008410, intron 1 of 5) 4892 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak2_123_664_0.542696296718466_9.64855867874779_12.743917902521 chr15 38077861 38079529 + 12.743917902521 NA 5' UTR (NM_001112721, exon 1 of 59) 5' UTR (NM_001112721, exon 1 of 59) 159 NM_001112721 70790 Mm.476840 NM_027553 ENSMUSG00000037487 Ubr5 Edd|Edd1 ubiquitin protein ligase E3 component n-recognin 5 protein-coding common_peak1_72_776_-0.619451762022083_9.29204490739667_12.7418933698324 chr19 8898093 8898835 + 12.7418933698324 NA TTS (NM_176843) TTS (NM_176843) 407 NM_008060 14376 Mm.3196 NM_008060 ENSMUSG00000071650 Ganab AU042638|G2an|GluII|mKIAA0088 alpha glucosidase 2 alpha neutral subunit protein-coding common_peak1_74_797_-0.610095227932678_9.33519732225601_12.7417005106833 chrX 164013574 164014513 + 12.7417005106833 NA intron (NM_181315, intron 2 of 7) intron (NM_181315, intron 2 of 7) 13967 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak1_30_349_-0.984528907098023_7.95894665828332_12.741648444845 chr1 53296498 53297050 + 12.741648444845 NA promoter-TSS (NM_145517) promoter-TSS (NM_145517) 254 NM_153556 227099 Mm.60499 NM_153556 ENSMUSG00000026098 Pms1 - postmeiotic segregation increased 1 (S. cerevisiae) protein-coding common_peak2_117_617_0.560675688323807_9.55180087206628_12.7380869344795 chr8 107149857 107151361 + 12.7380869344795 NA promoter-TSS (NM_025558) promoter-TSS (NM_025558) -52 NM_025558 66427 Mm.20242 NM_025558 ENSMUSG00000031924 Cyb5b 1810044O22Rik|AU015618|Cyb5m cytochrome b5 type B protein-coding unique_peak1_26_46_1.66761871516196_6.38839820925862_12.7367441852305 chr11 76588328 76588895 + 12.7367441852305 NA Intergenic B2_Mm2|SINE|B2 -10872 NM_198894 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak1_149_877_0.478684889940666_10.0174195745057_12.7367022861882 chr5 107960316 107962280 + 12.7367022861882 NA intron (NM_026062, intron 1 of 4) intron (NM_026062, intron 1 of 4) 25779 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_317_2510_0.292442279511253_11.4402674530271_12.73389497173 chr15 98566868 98568885 + 12.73389497173 NA promoter-TSS (NM_009833) promoter-TSS (NM_009833) -240 NM_009833 12455 Mm.29941 NM_009833 ENSMUSG00000011960 Ccnt1 2810478G24Rik|AI115585|CycT1 cyclin T1 protein-coding unique_peak2_17_223_-1.30266956018494_7.15602014196514_12.7332903001239 chr4 83317230 83318576 + 12.7332903001239 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 6286 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding unique_peak1_27_50_1.61413940804643_6.47949504599471_12.7324992664954 chr16 11526168 11526808 + 12.7324992664954 NA intron (NM_001290148, intron 7 of 13) intron (NM_001290148, intron 7 of 13) 120840 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak2_114_1230_-0.479048655512628_10.0260907187281_12.7313618915707 chr11 101315421 101317487 + 12.7313618915707 NA exon (NM_011192, exon 1 of 11) exon (NM_011192, exon 1 of 11) 203 NM_011192 19192 Mm.288477 NM_011192 ENSMUSG00000078652 Psme3 AA410043|AU020960|Ki|PA28gamma|REGgamma|pa28g proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) protein-coding common_peak1_128_704_0.528382239121077_9.72567056684669_12.7313358581221 chr6 124745034 124746278 + 12.7313358581221 NA exon (NM_007881, exon 6 of 10) exon (NM_007881, exon 6 of 10) -4577 NM_013535 14790 Mm.439877 NM_013535 ENSMUSG00000072772 Grcc10 2310033H05Rik|C10 gene rich cluster, C10 gene protein-coding common_peak2_126_1365_-0.453531074116045_10.1889762312321_12.7284848664582 chr4 103113528 103115480 + 12.7284848664582 NA promoter-TSS (NM_146254) promoter-TSS (NM_146254) 114 NM_001286222 71148 Mm.288721 NM_027696 ENSMUSG00000028522 Mier1 4933425I22Rik|5830411K19Rik|er1 MEIR1 treanscription regulator protein-coding common_peak1_323_3776_-0.263458363074582_11.7512958869029_12.7278599032311 chr10 20311325 20313507 + 12.7278599032311 NA promoter-TSS (NM_001025392) promoter-TSS (NM_001025392) -53 NM_001025392 72567 Mm.294783 NM_153787 ENSMUSG00000037608 Bclaf1 2610102K23Rik|2700025J07Rik|2810454G14Rik|5730534O06Rik|AI450190|AW556225|Btf|mKIAA0164 BCL2-associated transcription factor 1 protein-coding common_peak1_413_3581_0.246792525600471_11.9299458847862_12.7266714085504 chr10 41518326 41521242 + 12.7266714085504 NA intron (NM_016898, intron 1 of 5) CpG 284 NM_016898 53599 Mm.269815 NM_016898 ENSMUSG00000019818 Cd164 A115|A24|AA589639|AW540279|MGC-24|MSSP CD164 antigen protein-coding common_peak1_35_84_1.32190673692132_7.07034430459836_12.7262247848499 chr8 95067260 95067963 + 12.7262247848499 NA intron (NM_001042715, intron 7 of 17) intron (NM_001042715, intron 7 of 17) 12508 NM_001042715 330830 Mm.277112 NM_001042715 ENSMUSG00000031786 Drc7 Ccdc135|Gm770|SRG-L|SRG-S dynein regulatory complex subunit 7 protein-coding unique_peak2_33_378_-0.935905466010565_8.09810130516581_12.7225650566013 chr7 99467887 99469303 + 12.7225650566013 NA exon (NM_028145, exon 2 of 7) exon (NM_028145, exon 2 of 7) 2591 NM_028145 72184 Mm.153585 NM_028145 ENSMUSG00000035298 Klhl35 2810406K13Rik kelch-like 35 protein-coding common_peak1_33_378_-0.935905466010565_8.09810130516581_12.7225650566013 chr12 102628475 102629054 + 12.7225650566013 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 56256 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_85_913_-0.563710873617765_9.55419491824919_12.7216338918841 chr12 87147013 87148261 + 12.7216338918841 NA promoter-TSS (NM_010363) promoter-TSS (NM_010363) -70 NM_001252556 14874 Mm.29652 NM_010363 ENSMUSG00000021033 Gstz1 MAAI glutathione transferase zeta 1 (maleylacetoacetate isomerase) protein-coding unique_peak2_7_127_-1.93035904806119_6.03482047596941_12.7212489972803 chr10 81550929 81551889 + 12.7212489972803 NA Intergenic Intergenic -6363 NM_010301 14672 Mm.260925 NM_010301 ENSMUSG00000034781 Gna11 Dsk7|E430025L19 guanine nucleotide binding protein, alpha 11 protein-coding common_peak2_153_912_0.468862801975201_10.0689024509718_12.7201477113246 chr9 122949931 122951629 + 12.7201477113246 NA promoter-TSS (NM_010620) promoter-TSS (NM_010620) 220 NM_025419 66202 Mm.268307 NM_025419 ENSMUSG00000032551 1110059G10Rik - RIKEN cDNA 1110059G10 gene protein-coding unique_peak2_29_339_-1.00073450354_7.9090236843677_12.7199609043718 chr15 101224024 101225611 + 12.7199609043718 NA promoter-TSS (NR_045327) promoter-TSS (NR_045327) -40 NR_045327 380977 Mm.399924 NR_045326 ENSMUSG00000097915 A330009N23Rik - RIKEN cDNA A330009N23 gene ncRNA common_peak2_29_339_-1.00073450354_7.9090236843677_12.7199609043718 chr17 57031837 57032836 + 12.7199609043718 NA promoter-TSS (NM_010613) promoter-TSS (NM_010613) -829 NM_010613 16549 Mm.34296 NM_010613 ENSMUSG00000007670 Khsrp 6330409F21Rik|Fbp2|Fubp2|Ksrp KH-type splicing regulatory protein protein-coding common_peak1_186_2060_-0.362211115437232_10.8280232318206_12.7141813387487 chr8 46939890 46941538 + 12.7141813387487 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -46211 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak2_109_555_0.588962256848765_9.41342220114789_12.7127697174281 chr16 37867627 37869336 + 12.7127697174281 NA promoter-TSS (NM_177093) promoter-TSS (NM_177093) 81 NM_177093 320184 Mm.390882 NM_177093 ENSMUSG00000034158 Lrrc58 1810012N18Rik|C330018J07Rik leucine rich repeat containing 58 protein-coding common_peak1_274_2059_0.320967983193656_11.1689126136674_12.7120305848057 chr13 20183494 20185985 + 12.7120305848057 NA intron (NM_080288, intron 1 of 21) intron (NM_080288, intron 1 of 21) 94232 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding unique_peak2_36_408_-0.896173381730339_8.22787034207658_12.7115473272412 chr2 25574191 25575378 + 12.7115473272412 NA promoter-TSS (NM_029293) promoter-TSS (NM_029293) 87 NM_029293 75454 Mm.458079 NM_029293 ENSMUSG00000036504 Phpt1 1700008C22Rik|PHP|Php14 phosphohistidine phosphatase 1 protein-coding common_peak2_469_4241_0.227320079960137_12.1641889455106_12.7107473551447 chr4 40779119 40784052 + 12.7107473551447 NA Intergenic Intergenic -23700 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding common_peak1_307_2404_0.298124984488375_11.3808836709016_12.7098806861368 chr19 45056947 45059571 + 12.7098806861368 NA Intergenic Intergenic 10683 NM_001178013 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak2_92_989_-0.540467994079382_9.68105071792728_12.7069315402658 chr14 69976913 69979775 + 12.7069315402658 NA intron (NM_028560, intron 4 of 6) intron (NM_028560, intron 4 of 6) -99101 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding common_peak1_436_3850_0.238003581313674_12.0300191984538_12.7059583906386 chr2 127336118 127339652 + 12.7059583906386 NA promoter-TSS (NM_172539) promoter-TSS (NM_172539) -754 NM_172539 215095 Mm.31313 NM_172539 ENSMUSG00000050468 Astl 7420700F21|C87576|Sas1b astacin-like metalloendopeptidase (M12 family) protein-coding unique_peak2_40_447_-0.845911656992178_8.38439909356151_12.7029764756577 chr9 108262964 108264578 + 12.7029764756577 NA promoter-TSS (NM_001276482) promoter-TSS (NM_001276482) 44 NM_010017 13138 Mm.7524 NM_010017 ENSMUSG00000039952 Dag1 D9Wsu13e|DG|Dp427|Dp71 dystroglycan 1 protein-coding common_peak1_65_249_0.83814797418515_8.38485827175466_12.7029764756576 chr7 66243197 66244409 + 12.7029764756576 NA Intergenic Intergenic 134288 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_112_578_0.578099960183165_9.46646951808082_12.7005423790768 chr4 130663319 130664749 + 12.7005423790768 NA intron (NM_001159605, intron 1 of 19) intron (NM_001159605, intron 1 of 19) 675 NM_001159605 80912 Mm.440206 NM_030722 ENSMUSG00000028580 Pum1 AA517475|Pumm|mKIAA0099 pumilio RNA-binding family member 1 protein-coding common_peak2_84_903_-0.568537114562696_9.53591040513384_12.7003532258502 chr4 136285215 136286740 + 12.7003532258502 NA promoter-TSS (NM_009557) promoter-TSS (NM_009557) -92 NM_009557 22704 Mm.1504 NM_009557 ENSMUSG00000051351 Zfp46 AI426962|Mlz-4|Zfp-46|Znf436 zinc finger protein 46 protein-coding common_peak1_26_309_-1.05391683843464_7.74916598605692_12.698303219698 chr7 25221398 25221953 + 12.698303219698 NA intron (NM_175436, intron 1 of 2) intron (NM_175436, intron 1 of 2) 250 NM_175436 210172 Mm.129371 NM_175436 ENSMUSG00000046541 Zfp526 D030024H03Rik|Znf526 zinc finger protein 526 protein-coding common_peak1_91_978_-0.543479623137472_9.66342523803496_12.6955663627326 chr19 5770576 5771686 + 12.6955663627326 NA intron (NM_023912, intron 1 of 16) CpG 270 NM_023912 78891 Mm.276063 NM_023912 ENSMUSG00000024941 Scyl1 2810011O19Rik|C85140|Ntkl|mdf|mfd|p105 SCY1-like 1 (S. cerevisiae) protein-coding common_peak2_65_702_-0.653448620225298_9.13065656895989_12.6928976058375 chr5 135148441 135150317 + 12.6928976058375 NA promoter-TSS (NM_013763) promoter-TSS (NM_013763) -332 NM_013763 27368 Mm.36746 NM_013763 ENSMUSG00000005374 Tbl2 C76179|WS-bTRP transducin (beta)-like 2 protein-coding common_peak1_96_459_0.639848312419034_9.16541420715389_12.6925518055411 chr14 70442874 70444072 + 12.6925518055411 NA promoter-TSS (NM_025945) promoter-TSS (NM_025945) -2 NM_025945 67065 Mm.20420 NM_025945 ENSMUSG00000000776 Polr3d 2810426M17Rik|44kDa|AI326118|AW489084|BN51T|RPC4|TSBN51 polymerase (RNA) III (DNA directed) polypeptide D protein-coding common_peak1_18_232_-1.26382194125739_7.23227517402558_12.6925188620867 chr11 119300177 119300574 + 12.6925188620867 NA promoter-TSS (NM_138669) promoter-TSS (NM_138669) -332 NM_138669 192170 Mm.197555 NM_138669 ENSMUSG00000025580 Eif4a3 2400003O03Rik|Ddx48|eIF4A-III|mKIAA0111 eukaryotic translation initiation factor 4A3 protein-coding unique_peak2_18_232_-1.26382194125739_7.23227517402558_12.6925188620867 chr8 122703955 122705218 + 12.6925188620867 NA Intergenic Intergenic -5477 NM_009824 12398 Mm.194339 NM_009824 ENSMUSG00000006362 Cbfa2t3 A630044F12Rik|AI465270|AW229127|Cbfa2t3h|ETO-2|Eto2|MTGR2 core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) protein-coding common_peak2_678_6883_0.179843090588674_12.8389529273345_12.6924871161996 chr7 4646216 4659970 + 12.6924871161996 NA intron (NM_172894, intron 1 of 23) RSINE1|SINE|B4 5857 NM_172894 243819 Mm.258670 NM_172894 ENSMUSG00000052296 Ppp6r1 2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115 protein phosphatase 6, regulatory subunit 1 protein-coding common_peak2_32_368_-0.950157058399516_8.05239847686064_12.6829673794893 chr10 82353809 82355098 + 12.6829673794893 NA Intergenic CpG -113178 NM_001105557 237411 NM_172789 ENSMUSG00000062931 Zfp938 B230315N10Rik zinc finger protein 938 protein-coding unique_peak2_32_368_-0.950157058399516_8.05239847686064_12.6829673794893 chr11 60138782 60140763 + 12.6829673794893 NA promoter-TSS (NM_001037764) promoter-TSS (NM_001037764) -310 NM_001037764 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak1_22_32_1.89406668473506_5.99142746172598_12.6823941204688 chr10 78302871 78303236 + 12.6823941204688 NA intron (NM_053014, intron 2 of 9) MTC|LTR|ERVL-MaLR 37154 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA unique_peak1_22_32_1.89406668473506_5.99142746172598_12.6823941204688 chr12 110507885 110508501 + 12.6823941204688 NA intron (NM_012023, intron 1 of 13) MIRb|SINE|MIR 22454 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_58_207_0.905086686900733_8.15298306159146_12.680319972744 chr1 88635585 88636772 + 12.680319972744 NA Intergenic Intergenic 66013 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak2_58_207_0.905086686900733_8.15298306159146_12.680319972744 chr7 121706828 121707602 + 12.680319972744 NA promoter-TSS (NM_001033173) promoter-TSS (NM_001033173) 38 NM_001033173 76179 Mm.122538 NM_001033173 ENSMUSG00000063317 Usp31 6330567E21Rik|mKIAA1203 ubiquitin specific peptidase 31 protein-coding common_peak1_115_602_0.565873744985197_9.51895106439268_12.6797310106279 chr10 81648758 81649748 + 12.6797310106279 NA intron (NM_001142963, intron 1 of 3).2 CpG 184 NM_001142963 100233208 Mm.327168 NM_001142963 ENSMUSG00000096856 Gm10778 ENSMUSG00000074860 predicted gene 10778 protein-coding common_peak1_108_1163_-0.493133107378647_9.93830878921896_12.6793639408119 chr11 97717918 97720016 + 12.6793639408119 NA intron (NM_054051, intron 9 of 9) intron (NM_054051, intron 9 of 9) 15533 NM_011971 26446 Mm.21874 NM_011971 ENSMUSG00000069744 Psmb3 AL033320|C10-II proteasome (prosome, macropain) subunit, beta type 3 protein-coding common_peak1_129_1398_-0.446653415645502_10.226853539342_12.6746640605949 chr3 96696299 96697717 + 12.6746640605949 NA promoter-TSS (NM_001165949) promoter-TSS (NM_001165949) -68 NM_001165949 229615 Mm.1635 NM_018812 ENSMUSG00000028101 Pias3 Pias3l protein inhibitor of activated STAT 3 protein-coding common_peak1_22_271_-1.14900203715683_7.51296182267192_12.6743434220063 chr9 83447670 83448144 + 12.6743434220063 NA intron (NR_102437, intron 2 of 2) CpG -6780 NM_029434 75782 Mm.199698 NM_027448 ENSMUSG00000032258 Lca5 4930431B11Rik|5730406O13Rik|AV274874|ORF64 Leber congenital amaurosis 5 (human) protein-coding common_peak2_95_1021_-0.530179390472814_9.73208978570121_12.6731782431663 chr12 21475436 21477928 + 12.6731782431663 NA Intergenic MTC-int|LTR|ERVL-MaLR -59246 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak2_68_268_0.811132957690171_8.47702884140171_12.6725023410923 chr4 121097399 121098618 + 12.6725023410923 NA 5' UTR (NM_172700, exon 1 of 10) 5' UTR (NM_172700, exon 1 of 10) 235 NM_172700 230709 Mm.34399 NM_172700 ENSMUSG00000043207 Zmpste24 A530043O15Rik|D030046F19|FACE1|Face-1|MADB|STE24|Ste24p zinc metallopeptidase, STE24 protein-coding common_peak1_67_723_-0.643085003736322_9.17830338521505_12.6719633711202 chrX 20616851 20617734 + 12.6719633711202 NA promoter-TSS (NM_145627) promoter-TSS (NM_145627) -211 NM_001167775 236732 Mm.279194 NM_145627 ENSMUSG00000031060 Rbm10 E430039K10Rik RNA binding motif protein 10 protein-coding unique_peak1_19_22_2.16757227157376_5.60734809184389_12.6715609503758 chr12 81750282 81750682 + 12.6715609503758 NA intron (NM_001174107, intron 2 of 10) intron (NM_001174107, intron 2 of 10) 30688 NM_177395 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding unique_peak1_19_22_2.16757227157376_5.60734809184389_12.6715609503758-2 chr9 42105223 42105718 + 12.6715609503758 NA intron (NM_011436, intron 2 of 47) B1_Mur1|SINE|Alu 18819 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak2_71_764_-0.621405953334635_9.2686129609127_12.6705815115812 chr15 89122282 89123846 + 12.6705815115812 NA promoter-TSS (NM_001163319) promoter-TSS (NM_001163319) 86 NM_001163319 328580 Mm.380934 NM_001163319 ENSMUSG00000051786 Tubgcp6 AI843275|D430023H11|GCP-6|mKIAA1669 tubulin, gamma complex associated protein 6 protein-coding common_peak1_207_2312_-0.340291372436191_11.0054038644181_12.6702005677383 chr2 167367652 167369442 + 12.6702005677383 NA Intergenic Intergenic -19369 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak1_67_262_0.817841894054581_8.44783993631959_12.6681015226845 chr9 115583193 115584278 + 12.6681015226845 NA Intergenic MTEa|LTR|ERVL-MaLR 201916 NR_130329 100316675 NR_130329 ENSMUSG00000080409 Mir467h Mirn467h|mmu-mir-467h microRNA 467h ncRNA common_peak2_138_1499_-0.428762004590642_10.3363657830879_12.6638812809258 chr2 166029616 166032260 + 12.6638812809258 NA intron (NM_008679, intron 1 of 22) intron (NM_008679, intron 1 of 22) 38301 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak2_70_754_-0.627173288365425_9.24674619002973_12.6637286016879 chr3 146327998 146329820 + 12.6637286016879 NA Intergenic ORR1D2|LTR|ERVL-MaLR 50035 NR_033542 100038607 Mm.365888 NR_033542 ENSMUSG00000105602 Gm10636 ENSMUSG00000074175 predicted gene 10636 ncRNA unique_peak1_14_9_2.86011602652399_4.75198610814935_12.6635051183929 chr17 50331839 50332238 + 12.6635051183929 NA Intergenic ORR1E|LTR|ERVL-MaLR -38418 NM_001277863 13164 Mm.280641 NM_010021 ENSMUSG00000010592 Dazl Daz-like|Dazh|Dazl1|Dazla|Tpx-2|Tpx2 deleted in azoospermia-like protein-coding unique_peak1_14_9_2.86011602652399_4.75198610814935_12.6635051183929-3 chr9 120002313 120002716 + 12.6635051183929 NA Intergenic Intergenic -17856 NM_153287 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding unique_peak1_14_9_2.86011602652399_4.75198610814935_12.6635051183929-2 chr8 70601439 70601796 + 12.6635051183929 NA intron (NM_133772, intron 4 of 16) MT2B|LTR|ERVL 6697 NM_133772 76900 Mm.6667 NM_133772 ENSMUSG00000070003 Ssbp4 1210002E11Rik|AW743380|Sspb4 single stranded DNA binding protein 4 protein-coding common_peak1_73_300_0.772776285638065_8.62000781957873_12.6626004658055 chr13 112463589 112464818 + 12.6626004658055 NA 5' UTR (NM_010560, exon 1 of 17) 5' UTR (NM_010560, exon 1 of 17) 133 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak2_87_934_-0.555800189708336_9.59092245992083_12.658376856916 chr4 141138078 141140028 + 12.658376856916 NA intron (NM_001277195, intron 1 of 3) intron (NM_001277195, intron 1 of 3) 743 NR_102344 213491 Mm.332006 NM_174996 ENSMUSG00000040842 Szrd1 1110022I03|D4Ertd22e SUZ RNA binding domain containing 1 protein-coding common_peak1_37_417_-0.880382617497637_8.26716782333206_12.6564531304448 chr7 110122062 110122707 + 12.6564531304448 NA exon (NM_009516, exon 1 of 11) exon (NM_009516, exon 1 of 11) 325 NM_009516 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding common_peak1_37_417_-0.880382617497637_8.26716782333206_12.6564531304448-2 chr9 66599427 66600419 + 12.6564531304448 NA Intergenic Intergenic -6808 NM_001302122 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding common_peak2_37_417_-0.880382617497637_8.26716782333206_12.6564531304448 chr6 120356728 120357600 + 12.6564531304448 NA intron (NR_045558, intron 1 of 9) intron (NR_045558, intron 1 of 9) 305 NM_026028 67200 Mm.45767 NM_026028 ENSMUSG00000030177 Ccdc77 2400002C23Rik|2700091N06Rik|AV168274 coiled-coil domain containing 77 protein-coding common_peak2_45_134_1.08825751822903_7.62094435616535_12.6560431669238 chr6 99241162 99242253 + 12.6560431669238 NA intron (NM_001197321, intron 2 of 17) MLT1H|LTR|ERVL-MaLR 24808 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_14_194_-1.42528619233826_6.89468721758048_12.6536364488624-3 chrX 101531821 101532586 + 12.6536364488624 NA promoter-TSS (NM_001290729) promoter-TSS (NM_001290729) -532 NM_001290729 270627 Mm.261750 NM_001081008 ENSMUSG00000031314 Taf1 AU015687|B430306D02Rik|Ccg-1|Ccg1|KAT4|N-TAF1|TAFII250|Taf2a|p250 TATA-box binding protein associated factor 1 protein-coding unique_peak2_14_194_-1.42528619233826_6.89468721758048_12.6536364488624-2 chr5 32740572 32741867 + 12.6536364488624 NA intron (NM_177298, intron 3 of 7) intron (NM_177298, intron 3 of 7) 44407 NM_177298 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding unique_peak2_14_194_-1.42528619233826_6.89468721758048_12.6536364488624 chr17 9093890 9095238 + 12.6536364488624 NA Intergenic Lx6|LINE|L1 73458 NR_027881 67791 Mm.158175 NR_027881 ENSMUSG00000097049 6530411M01Rik - RIKEN cDNA 6530411M01 gene ncRNA common_peak1_14_194_-1.42528619233826_6.89468721758048_12.6536364488624 chr19 53409978 53410360 + 12.6536364488624 NA Intergenic L1ME3A|LINE|L1 -19596 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak1_94_445_0.647569890354907_9.12468484509776_12.6497237891899 chr15 76191770 76192906 + 12.6497237891899 NA exon (NM_001163549, exon 7 of 33) exon (NM_001163549, exon 7 of 33) 3372 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_98_1053_-0.52020468782305_9.78155680772569_12.6478154737643 chr13 24604132 24605952 + 12.6478154737643 NA promoter-TSS (NR_024599) promoter-TSS (NR_024599) -275 NR_024599 76024 Mm.440710 NR_024599 Gm11346 5830431A10Rik|AI447617|Gm11347|OTTMUSG00000000601|OTTMUSG00000000602 X-linked lymphocyte-regulated 5 pseudogene pseudo common_peak1_157_947_0.459968153401414_10.118727325599_12.6477202854702 chr7 12834160 12835820 + 12.6477202854702 NA 5' UTR (NM_022981, exon 1 of 8) 5' UTR (NM_022981, exon 1 of 8) 180 NM_022981 65020 Mm.292297 NM_022981 ENSMUSG00000058638 Zfp110 2900024E01Rik|N28112|NRIF|Nrif1 zinc finger protein 110 protein-coding common_peak1_51_558_-0.744670917015902_8.75436901433524_12.6475389466648 chr3 60413962 60414882 + 12.6475389466648 NA Intergenic Intergenic -58408 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_52_567_-0.734005354061569_8.7827444424739_12.645153230133 chr2 117311846 117314162 + 12.645153230133 NA intron (NM_011246, intron 2 of 16) intron (NM_011246, intron 2 of 16) 29873 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_103_511_0.608645867013644_9.30432293350682_12.6441541730252 chr1 136345041 136346112 + 12.6441541730252 NA 5' UTR (NM_001081360, exon 1 of 19) 5' UTR (NM_001081360, exon 1 of 19) 528 NM_001081360 67886 Mm.144143 NM_001081360 ENSMUSG00000041570 Camsap2 1600013L13Rik|4930541M15Rik|Camsap1l1|mKIAA1078 calmodulin regulated spectrin-associated protein family, member 2 protein-coding unique_peak2_6_117_-2.04930292171663_5.85799158850353_12.643180181448 chr1 93511341 93511978 + 12.643180181448 NA promoter-TSS (NM_145519) promoter-TSS (NM_145519) -445 NM_145519 227377 Mm.243091 NM_145519 ENSMUSG00000034066 Farp2 AI465173|BC009153|D030026M03Rik|Fir|mKIAA0793 FERM, RhoGEF and pleckstrin domain protein 2 protein-coding common_peak2_594_5792_0.195083007446156_12.5976364533949_12.6429521766441 chr4 108457592 108462484 + 12.6429521766441 NA 5' UTR (NM_175472, exon 2 of 31) 5' UTR (NM_175472, exon 2 of 31) 612 NM_175472 230594 Mm.25181 NM_175472 ENSMUSG00000034610 Zcchc11 6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191 zinc finger, CCHC domain containing 11 protein-coding common_peak1_16_213_-1.33793072542697_7.07250162368766_12.6369862269722 chr15 77842421 77842843 + 12.6369862269722 NA promoter-TSS (NM_022410) promoter-TSS (NM_022410) -457 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_37_94_1.2571209062523_7.1984160614571_12.6354310230486 chr11 96822022 96822814 + 12.6354310230486 NA intron (NM_001130450, intron 2 of 4) intron (NM_001130450, intron 2 of 4) 1595 NM_001130453 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak1_63_680_-0.662033102514192_9.08049443675498_12.6333152689561 chr13 67637176 67637840 + 12.6333152689561 NA intron (NM_183146, intron 1 of 3) intron (NM_183146, intron 1 of 3) 245 NM_183146 212281 Mm.342918 NM_183146 ENSMUSG00000021510 Zfp729a A530054K11Rik|Rslcan3 zinc finger protein 729a protein-coding unique_peak1_11_3_3.78716315690574_3.89358157845287_12.6332578038669 chr8 15337687 15338037 + 12.6332578038669 NA Intergenic Intergenic 280209 NM_008664 17930 Mm.272115 NM_008664 ENSMUSG00000031461 Myom2 AW146149 myomesin 2 protein-coding common_peak2_379_3195_0.259642719719945_11.7718730527879_12.63208428052 chr15 12320557 12323459 + 12.63208428052 NA intron (NM_025673, intron 1 of 3) CpG 512 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding common_peak1_328_3838_-0.259847648155462_11.7765910207692_12.6307522642909 chr1 40513175 40517185 + 12.6307522642909 NA promoter-TSS (NM_010553) promoter-TSS (NM_010553) -182 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_41_457_-0.835116833112089_8.4216453715409_12.6304398196223 chr3 41083401 41084021 + 12.6304398196223 NA promoter-TSS (NM_027558) promoter-TSS (NM_027558) -665 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_203_1362_0.388325552694958_10.6067326231527_12.6301016139059 chr13 92529830 92531769 + 12.6301016139059 NA promoter-TSS (NM_173392) promoter-TSS (NM_173392) 11 NM_173392 218441 Mm.259585 NM_173392 ENSMUSG00000021706 Zfyve16 AI035632|B130024H06Rik|B130031L15|mKIAA0305 zinc finger, FYVE domain containing 16 protein-coding common_peak1_124_1340_-0.454972742889771_10.1616071504596_12.6274552231645 chr11 49243426 49245097 + 12.6274552231645 NA promoter-TSS (NM_010794) promoter-TSS (NM_010794) 70 NM_001110148 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak1_156_1706_-0.399771708622088_10.5373614887167_12.6264261776569 chr7 101301227 101302718 + 12.6264261776569 NA exon (NM_001111111, exon 1 of 18) exon (NM_001111111, exon 1 of 18) 116 NM_001111111 73683 Mm.275744 NM_001111111 ENSMUSG00000047767 Atg16l2 2410118P20Rik autophagy related 16-like 2 (S. cerevisiae) protein-coding common_peak2_84_902_-0.566940329628366_9.53511201266667_12.62357141724 chr5 24738353 24740162 + 12.62357141724 NA Intergenic Intergenic -8577 NM_001081441 269633 Mm.392539 NM_026621 ENSMUSG00000055235 Wdr86 2810046M22Rik|BC059069 WD repeat domain 86 protein-coding common_peak2_51_167_0.989716133048527_7.88717548930302_12.6233277605376 chr6 50519458 50520786 + 12.6233277605376 NA Intergenic Intergenic 46352 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding common_peak2_274_3142_-0.288529951534516_11.4736615810315_12.6230634169828 chr2 112265041 112268788 + 12.6230634169828 NA exon (NM_133649, exon 1 of 25) exon (NM_133649, exon 1 of 25) 600 NM_133649 107723 Mm.491155 NM_133648 ENSMUSG00000027130 Slc12a6 9530023I19Rik|KCC3|gaxp solute carrier family 12, member 6 protein-coding common_peak1_34_80_1.34159571163891_7.01064785870408_12.6205341332583 chr2 165858900 165859662 + 12.6205341332583 NA intron (NM_001291158, intron 2 of 23) intron (NM_001291158, intron 2 of 23) -1108 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak1_34_80_1.34159571163891_7.01064785870408_12.6205341332583 chr3 108504147 108504909 + 12.6205341332583 NA intron (NM_001033304, intron 1 of 20) RSINE1|SINE|B4 31994 NM_001033304 229722 Mm.316890 NM_001033304 ENSMUSG00000040412 5330417C22Rik BB183350 RIKEN cDNA 5330417C22 gene protein-coding common_peak2_239_1709_0.348712756383511_10.914136987965_12.619141561793 chr16 35868466 35872803 + 12.619141561793 NA intron (NM_001039530, intron 1 of 16) intron (NM_001039530, intron 1 of 16) 748 NM_001039530 547253 Mm.244406 NM_001039530 ENSMUSG00000034422 Parp14 1600029O10Rik|ARTD8|BC021340|CoaSt6|mKIAA1268 poly (ADP-ribose) polymerase family, member 14 protein-coding common_peak1_141_1533_-0.42331091046956_10.3714273122682_12.6191340912956 chr8 69995170 69996556 + 12.6191340912956 NA intron (NM_001286450, intron 1 of 12) CpG 521 NM_001286450 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_30_348_-0.980401021475346_7.95688271547198_12.6189884705766 chr19 37110043 37110617 + 12.6189884705766 NA intron (NM_001290826, intron 4 of 10) B1_Mur2|SINE|Alu -63513 NR_045329 319931 Mm.446730 NR_045329 ENSMUSG00000097591 A330032B11Rik - RIKEN cDNA A330032B11 gene ncRNA unique_peak2_30_348_-0.980401021475346_7.95688271547198_12.6189884705766 chr7 16364567 16367148 + 12.6189884705766 NA intron (NM_001285891, intron 5 of 9) intron (NM_001285891, intron 5 of 9) 22039 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding common_peak1_96_1031_-0.525888892059845_9.74828280939333_12.6159642718455 chr7 45127903 45128747 + 12.6159642718455 NA promoter-TSS (NR_000002) promoter-TSS (NR_000002) 420 NM_009438 22121 Mm.180458 NM_009438 ENSMUSG00000074129 Rpl13a 1810026N22Rik|Tstap198-7|tum-antigen ribosomal protein L13A protein-coding common_peak1_46_507_-0.785553599346148_8.59590788709909_12.615773249837 chr17 85090590 85091266 + 12.615773249837 NA promoter-TSS (NM_001163622) promoter-TSS (NM_001163622) 228 NM_028576 73582 Mm.260753 NM_028576 ENSMUSG00000071037 Camkmt 1700106N22Rik|AI480743|AV099781|CLNMT|CaM KMT calmodulin-lysine N-methyltransferase protein-coding common_peak1_81_869_-0.576816014484308_9.47646358349394_12.6140098975238 chr6 119372508 119373779 + 12.6140098975238 NA intron (NM_197985, intron 1 of 7) intron (NM_197985, intron 1 of 7) -42377 NM_172492 211187 Mm.121498 NM_172492 ENSMUSG00000055003 Lrtm2 A230084J22|AI841794 leucine-rich repeats and transmembrane domains 2 protein-coding common_peak1_180_1151_0.419282314034049_10.3795661584593_12.6132925402559 chr4 46583926 46586112 + 12.6132925402559 NA intron (NM_001164804, intron 1 of 11) RLTR3_Mm|LTR|ERVK 16910 NM_001164804 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak2_149_1624_-0.409461983327155_10.4614930111396_12.6065700849882 chr17 27404285 27407310 + 12.6065700849882 NA Intergenic Intergenic 47700 NR_106077 102466228 NR_106077 ENSMUSG00000106215 Mir7218 mmu-mir-7218 microRNA 7218 ncRNA common_peak1_33_377_-0.932093852060545_8.0961954981908_12.6046635052826 chr10 81605569 81606282 + 12.6046635052826 NA promoter-TSS (NR_030677) promoter-TSS (NR_030677) -383 NR_030677 268319 Mm.131825 NM_001033363 ENSMUSG00000074862 BC025920 - zinc finger protein pseudogene pseudo common_peak2_138_1498_-0.427799887155258_10.3358847243702_12.6042508425062 chr5 135186143 135188437 + 12.6042508425062 NA promoter-TSS (NM_011714) promoter-TSS (NM_011714) -33 NM_011714 22385 Mm.40331 NM_011714 ENSMUSG00000002748 Baz1b C87820|WSTF|Wbscr9 bromodomain adjacent to zinc finger domain, 1B protein-coding common_peak1_157_1717_-0.39780291883879_10.5476128617191_12.5998818175204 chr17 74338208 74339824 + 12.5998818175204 NA promoter-TSS (NM_001162870) promoter-TSS (NM_001162870) 29 NM_016962 50850 Mm.19804 NM_016962 ENSMUSG00000024068 Spast Spg4|mKIAA1083 spastin protein-coding common_peak1_36_407_-0.892641690760085_8.22610449659145_12.5980035116707 chr17 78994980 78995404 + 12.5980035116707 NA intron (NM_029239, intron 2 of 18) intron (NM_029239, intron 2 of 18) 13313 NM_001171005 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding common_peak1_153_1671_-0.404025280121461_10.5053464920202_12.596226621549 chr6 125231022 125232557 + 12.596226621549 NA promoter-TSS (NM_145391) promoter-TSS (NM_145391) 71 NM_145391 213233 Mm.296902 NM_145391 ENSMUSG00000038213 Tapbpl BC017613|TAPBPL-R|Tapbplr TAP binding protein-like protein-coding common_peak1_29_338_-0.996485030538641_7.90689894786702_12.5956632808893 chr1 72710733 72711290 + 12.5956632808893 NA promoter-TSS (NM_009084) promoter-TSS (NM_009084) -249 NM_009084 19981 Mm.21529 NM_009084 ENSMUSG00000046330 Rpl37a - ribosomal protein L37a protein-coding common_peak2_167_1035_0.440503289671012_10.2370599325221_12.5929227712042 chr6 115807644 115809297 + 12.5929227712042 NA promoter-TSS (NR_028546) promoter-TSS (NR_028546) 273 NM_172086 19951 Mm.104368 NM_172086 ENSMUSG00000057841 Rpl32 AU020185|rpL32-3A ribosomal protein L32 protein-coding common_peak1_39_104_1.20350102115101_7.31599602824163_12.5918641674382 chr1 143776455 143777171 + 12.5918641674382 NA promoter-TSS (NM_001159866) promoter-TSS (NM_001159866) 238 NM_013835 20822 Mm.40370 NM_013835 ENSMUSG00000018199 Trove2 1810007I17Rik|A530054J02Rik|AI646302|SS-A/Ro|Ssa|Ssa2 TROVE domain family, member 2 protein-coding common_peak1_68_732_-0.635074067887016_9.2001323541903_12.5895892112753 chr9 21291398 21292326 + 12.5895892112753 NA promoter-TSS (NM_009878) promoter-TSS (NM_009878) -653 NM_009878 12581 Mm.29020 NM_009878 ENSMUSG00000096472 Cdkn2d INK4d|p19|p19INK4d cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) protein-coding common_peak1_21_260_-1.16810825387593_7.44385186963192_12.5878758952556 chr9 124123194 124123629 + 12.5878758952556 NA intron (NM_009917, intron 1 of 1) RMER12C|LTR|ERVK 1868 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak1_76_816_-0.597470727372617_9.37545690445937_12.5853649594799 chr9 57420471 57421613 + 12.5853649594799 NA intron (NM_176831, intron 4 of 6) intron (NM_176831, intron 4 of 6) 19072 NM_176831 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak1_20_251_-1.19980527970142_7.37737728364921_12.584058001564 chr8 57637387 57637865 + 12.584058001564 NA intron (NM_144731, intron 1 of 11) intron (NM_144731, intron 1 of 11) -14127 NR_040698 100502619 Mm.393851 NR_040698 AW046200 - expressed sequence AW046200 ncRNA unique_peak2_3_85_-2.58323611394964_5.13464669772728_12.5815164864509 chr7 130826754 130827457 + 12.5815164864509 NA Intergenic Intergenic -38805 NM_133942 101476 Mm.323554 NM_133942 ENSMUSG00000040268 Plekha1 AA960558|C920009D07Rik|TAPP1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 protein-coding unique_peak1_16_14_2.49664566536565_5.15521342829135_12.5815164864509 chr11 119624335 119624736 + 12.5815164864509 NA intron (NM_028898, intron 1 of 33) intron (NM_028898, intron 1 of 33) 21630 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding unique_peak1_16_14_2.49664566536565_5.15521342829135_12.5815164864509-2 chr9 42039046 42039401 + 12.5815164864509 NA intron (NM_011436, intron 16 of 47) intron (NM_011436, intron 16 of 47) 85066 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak1_72_774_-0.615733473775972_9.29018576327361_12.576328385785 chr12 110446179 110447058 + 12.576328385785 NA promoter-TSS (NM_001135001) promoter-TSS (NM_001135001) -561 NM_001135001 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_55_597_-0.710824612993823_8.86858936770119_12.5710377348846 chr2 121448139 121449170 + 12.5710377348846 NA promoter-TSS (NM_011354) promoter-TSS (NM_011354) -544 NM_011354 378702 Mm.262252 NM_011354 ENSMUSG00000074884 Serf2 C80083|Msmac1l|m4F5rel small EDRK-rich factor 2 protein-coding common_peak2_55_597_-0.710824612993823_8.86858936770119_12.5710377348846 chr10 130321880 130324343 + 12.5710377348846 NA intron (NM_183264, intron 1 of 8) intron (NM_183264, intron 1 of 8) 259 NM_183264 67596 Mm.131264 NM_183264 ENSMUSG00000034833 Tespa1 5830405N20Rik|A430001F24Rik|AI450549 thymocyte expressed, positive selection associated 1 protein-coding common_peak2_49_156_1.01800675443111_7.80362412610718_12.5695754852204 chr8 106016780 106018006 + 12.5695754852204 NA intron (NM_025518, intron 2 of 15) intron (NM_025518, intron 2 of 15) -5907 NM_028038 71986 Mm.307515 NM_028038 ENSMUSG00000045538 Ddx28 2410004K13Rik|AI449652|Mddx28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 protein-coding common_peak1_26_308_-1.04925546106478_7.74683529737198_12.5684092577474 chr10 24753991 24754529 + 12.5684092577474 NA Intergenic ID_B1|SINE|B4 -42101 NM_008813 18605 Mm.27254 NM_008813 ENSMUSG00000037370 Enpp1 4833416E15Rik|AI428932|C76301|CD203c|E-NPP 1|E-NPP1|Ly-41|M6S1|NPP1|Npps|PC-1|Pca|Pca-1|Pdnp1|ttw|twy ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding common_peak2_153_914_0.465705918788018_10.0704808925654_12.5674322565149 chr6 29525986 29529061 + 12.5674322565149 NA intron (NM_001311083, intron 1 of 9) intron (NM_001311083, intron 1 of 9) 898 NM_012057 27056 Mm.6479 NM_012057 ENSMUSG00000029771 Irf5 AW491843|mirf5 interferon regulatory factor 5 protein-coding common_peak1_32_367_-0.946242008396132_8.05044095185895_12.5637032938295-2 chr7 104290196 104290947 + 12.5637032938295 NA Intergenic Intergenic -2465 NM_001310602 667823 Mm.482375 NM_001310602 ENSMUSG00000060441 Trim5 EG667823|Gm8833 tripartite motif-containing 5 protein-coding common_peak1_32_367_-0.946242008396132_8.05044095185895_12.5637032938295 chr13 96524328 96525010 + 12.5637032938295 NA intron (NM_012048, intron 1 of 14) B2_Mm2|SINE|B2 17816 NM_012048 27015 Mm.89926 NM_012048 ENSMUSG00000021668 Polk DINP|Dinb1 polymerase (DNA directed), kappa protein-coding common_peak2_247_1789_0.340775266141756_10.9761315052225_12.5619175152828 chr16 32913430 32915149 + 12.5619175152828 NA exon (NM_001081255, exon 1 of 21) exon (NM_001081255, exon 1 of 21) 189 NM_001310672 70144 Mm.491178 NM_001081255 ENSMUSG00000022801 Lrch3 2210409B11Rik|AW215594|Gm1742 leucine-rich repeats and calponin homology (CH) domain containing 3 protein-coding common_peak1_293_3383_-0.276890788869627_11.5860684586851_12.5588586103071 chr6 129208565 129212341 + 12.5588586103071 NA Intergenic Intergenic 27592 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak2_448_3995_0.232618786350114_12.0806502609675_12.5585117055345 chr6 134919553 134923277 + 12.5585117055345 NA intron (NM_009875, intron 1 of 2) intron (NM_009875, intron 1 of 2) 1014 NM_009875 12576 Mm.2958 NM_009875 ENSMUSG00000003031 Cdkn1b AA408329|AI843786|Kip1|p27|p27Kip1 cyclin-dependent kinase inhibitor 1B protein-coding common_peak1_65_250_0.832388704896465_8.387737906399_12.5581556471314 chr11 94563549 94564561 + 12.5581556471314 NA intron (NM_153807, intron 10 of 15) intron (NM_153807, intron 10 of 15) -1019 NM_007689 12643 Mm.440523 NM_007689 ENSMUSG00000039084 Chad SLRR4A chondroadherin protein-coding unique_peak2_10_155_-1.65221678735465_6.45929382518492_12.5525510235466-2 chrX 142469241 142470640 + 12.5525510235466 NA Intergenic Intergenic -79405 NM_019477 50790 Mm.391337 NM_019477 ENSMUSG00000031278 Acsl4 9430020A05Rik|ACS4|AU018108|Facl4|Lacs4 acyl-CoA synthetase long-chain family member 4 protein-coding unique_peak2_10_155_-1.65221678735465_6.45929382518492_12.5525510235466 chr7 141270997 141272104 + 12.5525510235466 NA exon (NM_001114322, exon 13 of 15) exon (NM_001114322, exon 13 of 15) -5126 NM_001252600 54123 Mm.3233 NM_016850 ENSMUSG00000025498 Irf7 - interferon regulatory factor 7 protein-coding common_peak1_371_4405_-0.241212436440581_11.9846475614806_12.5523681952453 chr10 39468513 39473457 + 12.5523681952453 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 101186 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_79_341_0.726506335117591_8.78110568244469_12.5487699883922 chr2 6322279 6323426 + 12.5487699883922 NA promoter-TSS (NM_001080548) promoter-TSS (NM_001080548) 95 NM_001080548 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding common_peak2_79_341_0.726506335117591_8.78110568244469_12.5487699883922 chr2 11534741 11536189 + 12.5487699883922 NA intron (NM_001177758, intron 1 of 14) CpG 18464 NM_001177758 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding common_peak1_207_1401_0.381987544189377_10.6442644061053_12.5445874579452 chr7 90058957 90061148 + 12.5445874579452 NA Intergenic Intergenic 30893 NR_110364 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15 RIKEN cDNA E230029C05 gene ncRNA common_peak1_69_275_0.799533568931722_8.50829124124403_12.5410129855369 chr5 69591670 69592549 + 12.5410129855369 NA intron (NM_001038015, intron 1 of 6) CpG 176 NM_001038015 67980 Mm.33830 NM_027681 ENSMUSG00000029209 Gnpda2 4921523I18Rik|4933412A11Rik|BB189630|GNPDA|Gnp2|Sb52|mKIAA4008 glucosamine-6-phosphate deaminase 2 protein-coding common_peak2_171_1071_0.432862602168891_10.2825204915422_12.53872937423 chr8 125082501 125085090 + 12.53872937423 NA intron (NM_174853, intron 1 of 11) intron (NM_174853, intron 1 of 11) 29600 NM_174854 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding common_peak1_82_879_-0.571853844356312_9.4954327913465_12.5385836049976 chr5 31613673 31614794 + 12.5385836049976 NA intron (NM_025796, intron 1 of 3) CpG 282 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_75_314_0.754380807382324_8.67639842207844_12.5385574584875 chr4 134244634 134245699 + 12.5385574584875 NA intron (NR_040436, intron 4 of 4) intron (NR_040436, intron 4 of 4) 425 NM_024215 68040 Mm.300404 NM_024215 ENSMUSG00000028840 Zfp593 3110024A21Rik|AV062409|E130106C14Rik|ZNF593 zinc finger protein 593 protein-coding common_peak1_22_270_-1.14368823726036_7.51030492272369_12.5360910240385 chr13 12565857 12566453 + 12.5360910240385 NA exon (NM_026184, exon 1 of 16) exon (NM_026184, exon 1 of 16) 272 NM_026184 67475 Mm.358706 NM_026184 ENSMUSG00000057069 Ero1lb 1300013B24Rik|1700065B09Rik|AI447560|Ero1b|ero1-beta ERO1-like beta (S. cerevisiae) protein-coding common_peak2_195_2165_-0.35071666832493_10.9054591934459_12.534415971602 chr2 11201351 11205698 + 12.534415971602 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 31142 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak2_24_289_-1.09389389787855_7.63296214107566_12.5342509764655 chr10 24869891 24870620 + 12.5342509764655 NA intron (NM_001166416, intron 1 of 29) CpG 269 NM_027347 70208 Mm.28020 NM_027347 ENSMUSG00000019984 Med23 130kDa|3000002A17Rik|Crsp3|ESTM7|Sur2|X83317|mKIAA1216 mediator complex subunit 23 protein-coding common_peak2_68_269_0.805779723195963_8.47970545864881_12.5329513459292 chr5 105622397 105624452 + 12.5329513459292 NA Intergenic Intergenic -76545 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak2_7_126_-1.91904373483335_6.02916281935549_12.5236039412027 chr11 116167513 116168232 + 12.5236039412027 NA 5' UTR (NM_172571, exon 1 of 31) 5' UTR (NM_172571, exon 1 of 31) 306 NM_172571 217335 Mm.35241 NM_172571 ENSMUSG00000020776 Fbf1 1110033G01Rik|5930413D20|mKIAA1863 Fas (TNFRSF6) binding factor 1 protein-coding common_peak1_160_1750_-0.391966455074579_10.5779801408963_12.5232833202364 chr9 37230875 37232812 + 12.5232833202364 NA intron (NM_020258, intron 17 of 17) intron (NM_020258, intron 17 of 17) 23527 NM_001310096 66279 Mm.41451 NM_025464 ENSMUSG00000032121 Tmem218 1810021J13Rik|AV004931 transmembrane protein 218 protein-coding common_peak1_19_240_-1.22175510859919_7.30201178193037_12.5213674891575-2 chr7 28867469 28867859 + 12.5213674891575 NA Intergenic Intergenic 3278 NM_008496 16858 Mm.20973 NM_008496 ENSMUSG00000053522 Lgals7 Galectin-7|Pig1 lectin, galactose binding, soluble 7 protein-coding common_peak1_19_240_-1.22175510859919_7.30201178193037_12.5213674891575 chr1 52020218 52020773 + 12.5213674891575 NA intron (NM_011487, intron 3 of 23) B4A|SINE|B4 12255 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 protein-coding common_peak2_86_389_0.685467516916242_8.95006407220773_12.5206413317615 chr10 128175867 128177248 + 12.5206413317615 NA promoter-TSS (NM_019711) promoter-TSS (NM_019711) 11 NM_019711 56516 Mm.42247 NM_019711 ENSMUSG00000040043 Rbms2 2610315E04Rik|Scr3 RNA binding motif, single stranded interacting protein 2 protein-coding common_peak2_64_690_-0.655627380055362_9.10472821036058_12.5202316620074 chr10 127063313 127064846 + 12.5202316620074 NA intron (NM_009870, intron 1 of 7) intron (NM_009870, intron 1 of 7) 476 NM_009870 12567 Mm.6839 NM_009870 ENSMUSG00000006728 Cdk4 Crk3 cyclin-dependent kinase 4 protein-coding common_peak1_25_299_-1.07339744585495_7.69211996756841_12.5183836933535 chr19 4201742 4202283 + 12.5183836933535 NA promoter-TSS (NM_011237) promoter-TSS (NM_011237) -409 NM_011237 19367 Mm.277629 NM_011237 ENSMUSG00000024824 Rad9a Rad9 RAD9 checkpoint clamp component A protein-coding unique_peak1_13_7_3.05995243883157_4.52997621941578_12.5168004757615 chr6 8771147 8771500 + 12.5168004757615 NA intron (NM_010492, intron 1 of 13) intron (NM_010492, intron 1 of 13) 7161 NM_010492 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak1_36_90_1.27198901101271_7.14378914570505_12.5130191932982 chr15 12375819 12376471 + 12.5130191932982 NA exon (NM_001081064, exon 19 of 24) exon (NM_001081064, exon 19 of 24) 54649 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding common_peak2_50_162_0.998942622896379_7.84819946567927_12.5051647204182 chr5 117318738 117319842 + 12.5051647204182 NA promoter-TSS (NM_001033311) promoter-TSS (NM_001033311) 24 NM_001033311 231668 Mm.298603 NM_001033311 ENSMUSG00000066894 Vsig10 - V-set and immunoglobulin domain containing 10 protein-coding common_peak2_68_731_-0.633104518037248_9.19914757926542_12.5047910010854 chr15 99008372 99010096 + 12.5047910010854 NA Intergenic Intergenic -20657 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding common_peak1_54_586_-0.715925674724136_8.83925385574798_12.4983457941513 chr16 18288504 18289285 + 12.4983457941513 NA intron (NM_033324, intron 1 of 13) CpG 274 NM_033324 94223 Mm.447352 NM_033324 ENSMUSG00000022718 Dgcr8 D16H22S1742E|D16H22S788E|D16Wis2|Gy1|N41|Vo59c07|mir-1306 DiGeorge syndrome critical region gene 8 protein-coding common_peak2_170_1063_0.43335080020227_10.2719578356023_12.496233472669 chr16 10991503 10993750 + 12.496233472669 NA intron (NM_019980, intron 1 of 3) CpG 495 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak2_58_628_-0.691389801837463_8.95122130596056_12.4961805841375 chr1 164306559 164308144 + 12.4961805841375 NA promoter-TSS (NM_138314) promoter-TSS (NM_138314) 133 NM_001160209 66352 Mm.33285 NM_025505 ENSMUSG00000026577 Blzf1 1700030G05Rik|Blzf1l|Golgin-45|Jem-1 basic leucine zipper nuclear factor 1 protein-coding common_peak1_38_425_-0.861766170617977_8.30382653491685_12.496114826131-2 chr9 57439562 57440166 + 12.496114826131 NA intron (NM_176831, intron 1 of 6) intron (NM_176831, intron 1 of 6) 250 NM_176831 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak1_38_425_-0.861766170617977_8.30382653491685_12.496114826131 chr3 93597427 93598060 + 12.496114826131 NA Intergenic Intergenic 42626 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak1_115_604_0.561096604723325_9.52133963452362_12.4925621057292 chr12 33313542 33315215 + 12.4925621057292 NA intron (NM_001033436, intron 1 of 7) intron (NM_001033436, intron 1 of 7) 11863 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_168_1045_0.437146712282468_10.2492404923882_12.4922582682257 chr6 29608867 29610493 + 12.4922582682257 NA promoter-TSS (NM_177296) promoter-TSS (NM_177296) -73 NM_177296 320938 Mm.276381 NM_177296 ENSMUSG00000012535 Tnpo3 5730544L10Rik|C430013M08Rik|C81142|D6Ertd313e|Trn-SR|mKIAA4133 transportin 3 protein-coding common_peak2_101_1083_-0.507865953040058_9.82821606483384_12.4903751182859 chr12 3462059 3465246 + 12.4903751182859 NA intron (NM_172421, intron 4 of 10) intron (NM_172421, intron 4 of 10) 36795 NM_172421 75302 Mm.120475 NM_172421 ENSMUSG00000037486 Asxl2 4930556B16Rik|mKIAA1685 additional sex combs like 2 (Drosophila) protein-coding common_peak1_33_376_-0.928272141108136_8.09428464271459_12.4871586349359 chr7 25281348 25282077 + 12.4871586349359 NA promoter-TSS (NM_027882) promoter-TSS (NM_027882) -467 NM_027882 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak1_136_1474_-0.430161682601707_10.3114183978357_12.4868562070095 chr11 4593916 4594840 + 12.4868562070095 NA intron (NM_028860, intron 1 of 17) CpG 437 NM_028860 74302 Mm.425669 NM_028860 ENSMUSG00000034354 Mtmr3 1700092A20Rik|AI255150|AW557713|FYVE-DSP1|ZFYVE10|mKIAA0371 myotubularin related protein 3 protein-coding common_peak1_60_220_0.876616891655541_8.2262110052192_12.4848341048134 chr3 98062770 98064240 + 12.4848341048134 NA intron (NM_010928, intron 2 of 33) intron (NM_010928, intron 2 of 33) 49967 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_60_220_0.876616891655541_8.2262110052192_12.4848341048134 chr5 113901464 113902936 + 12.4848341048134 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 6506 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_373_3131_0.260661487997339_11.7431992412897_12.483924081824 chr3 146498882 146500986 + 12.483924081824 NA promoter-TSS (NM_027617) promoter-TSS (NM_027617) 98 NM_010318 14707 Mm.140804 NM_010318 ENSMUSG00000068523 Gng5 G(y)5 guanine nucleotide binding protein (G protein), gamma 5 protein-coding common_peak2_524_4917_0.209829797959056_12.3687709185756_12.4835075343797 chr11 102315895 102320935 + 12.4835075343797 NA intron (NM_001302954, intron 1 of 19) CpG-2669 681 NM_001302955 21429 Mm.2845 NM_011551 ENSMUSG00000020923 Ubtf A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1 upstream binding transcription factor, RNA polymerase I protein-coding common_peak1_35_85_1.30503291835693_7.07878121388056_12.4820844632645-2 chr6 120911400 120912029 + 12.4820844632645 NA intron (NM_007544, intron 1 of 5) intron (NM_007544, intron 1 of 5) 5106 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding common_peak1_35_85_1.30503291835693_7.07878121388056_12.4820844632645 chr18 32938766 32939590 + 12.4820844632645 NA 5' UTR (NM_009793, exon 1 of 11) 5' UTR (NM_009793, exon 1 of 11) 137 NM_009793 12326 Mm.222329 NM_009793 ENSMUSG00000038128 Camk4 A430110E23Rik|AI666733|CaMKIV|CaMKIV/Gr|D18Bwg0362e calcium/calmodulin-dependent protein kinase IV protein-coding unique_peak1_12_5_3.34384643273342_4.25688571708787_12.4790799210603 chr10 79762502 79762907 + 12.4790799210603 NA non-coding (NR_027505, exon 2 of 8) non-coding (NR_027505, exon 2 of 8) 4248 NM_144528 70294 Mm.466670 NM_144528 ENSMUSG00000035890 Rnf126 2610010O19Rik ring finger protein 126 protein-coding unique_peak1_12_5_3.34384643273342_4.25688571708787_12.4790799210603-4 chr4 149999871 150000261 + 12.4790799210603 NA intron (NM_173371, intron 1 of 4) intron (NM_173371, intron 1 of 4) 3170 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding unique_peak1_12_5_3.34384643273342_4.25688571708787_12.4790799210603-3 chr2 128343956 128344278 + 12.4790799210603 NA intron (NR_028589, intron 1 of 2) MTD|LTR|ERVL-MaLR 85234 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA unique_peak1_12_5_3.34384643273342_4.25688571708787_12.4790799210603-6 chr9 63989431 63989794 + 12.4790799210603 NA intron (NM_008542, intron 3 of 3) intron (NM_008542, intron 3 of 3) 32447 NM_008542 17130 Mm.325757 NM_008542 ENSMUSG00000036867 Smad6 Madh6|b2b390Clo SMAD family member 6 protein-coding unique_peak1_12_5_3.34384643273342_4.25688571708787_12.4790799210603-5 chr8 81612982 81613364 + 12.4790799210603 NA intron (NM_001297591, intron 2 of 24) intron (NM_001297591, intron 2 of 24) 270611 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding unique_peak1_12_5_3.34384643273342_4.25688571708787_12.4790799210603-2 chr10 98952050 98952344 + 12.4790799210603 NA intron (NM_026482, intron 1 of 20) B4A|SINE|B4 37045 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak2_60_648_-0.677555216952166_9.00329705952306_12.4748149981249 chr10 45001999 45003966 + 12.4748149981249 NA Intergenic Intergenic -64232 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak2_60_648_-0.677555216952166_9.00329705952306_12.4748149981249-2 chr4 86611275 86612844 + 12.4748149981249 NA promoter-TSS (NM_173400) promoter-TSS (NM_173400) -37 NM_173400 230376 Mm.74730 NM_173400 ENSMUSG00000038047 Haus6 6230416J20Rik|9830144E06|D4Ertd27e|mKIAA1574 HAUS augmin-like complex, subunit 6 protein-coding common_peak1_60_648_-0.677555216952166_9.00329705952306_12.4748149981249 chr11 76406847 76407704 + 12.4748149981249 NA exon (NM_023355, exon 1 of 3) exon (NM_023355, exon 1 of 3) 132 NM_019818 56322 Mm.18803 NM_019818 ENSMUSG00000020843 Timm22 Tim22 translocase of inner mitochondrial membrane 22 protein-coding common_peak2_396_4738_-0.231224736024622_12.0947545776203_12.4742673922045 chr11 118224152 118233483 + 12.4742673922045 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -16075 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_96_1029_-0.523090258707171_9.74688349271699_12.472815730096 chr1 36806043 36807293 + 12.472815730096 NA intron (NM_018872, intron 31 of 40) intron (NM_018872, intron 31 of 40) 27684 NM_001289612 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak2_123_1327_-0.455132604239907_10.147473129227_12.4719096087143 chr1 175624686 175626537 + 12.4719096087143 NA promoter-TSS (NM_010209) promoter-TSS (NM_010209) 24 NM_010209 14194 Mm.41502 NM_010209 ENSMUSG00000026526 Fh1 Fh|Fh-1 fumarate hydratase 1 protein-coding common_peak1_142_822_0.487441726160801_9.92846948350203_12.4714448863808 chr14 45387801 45389519 + 12.4714448863808 NA intron (NM_019425, intron 1 of 5) CpG 136 NM_019425 54342 Mm.312945 NM_019425 ENSMUSG00000037722 Gnpnat1 AU017428|AU040593|EMeg32|Gpnat1|Gsnpat glucosamine-phosphate N-acetyltransferase 1 protein-coding common_peak1_84_900_-0.563741447961046_9.53351257183301_12.4705908875502 chr12 108179717 108180466 + 12.4705908875502 NA promoter-TSS (NM_028262) promoter-TSS (NM_028262) 353 NM_009832 12454 Mm.474441 NM_009832 ENSMUSG00000021258 Ccnk AW123198|AW413594|CPR4|CycK cyclin K protein-coding common_peak2_111_1193_-0.481797748874168_9.98068824682772_12.469796188634 chr2 29059630 29061587 + 12.469796188634 NA intron (NM_009442, intron 1 of 11) CpG 345 NM_009442 22130 Mm.252195 NM_009442 ENSMUSG00000026803 Ttf1 AV245725|TTF-1|TTF-I transcription termination factor, RNA polymerase I protein-coding unique_peak2_9_144_-1.71538717357052_6.32221550322968_12.4691101460289 chr13 23437135 23438095 + 12.4691101460289 NA Intergenic Intergenic -6598 NR_015492 320842 Mm.487476 NR_015492 ENSMUSG00000085024 C230035I16Rik - RIKEN cDNA C230035I16 gene ncRNA common_peak1_61_658_-0.670840139087389_9.02871458546436_12.4671546670494 chr16 35918605 35919501 + 12.4671546670494 NA Intergenic Intergenic -19417 NM_030253 80285 Mm.49074 NM_030253 ENSMUSG00000022906 Parp9 ARTD9|AW214463|BC003281|Bagl|Bal|PARP-9 poly (ADP-ribose) polymerase family, member 9 protein-coding common_peak2_83_889_-0.566962259682549_9.51418039601248_12.4654067768739 chr2 25227820 25229553 + 12.4654067768739 NA TTS (NM_080854) TTS (NM_080854) -3984 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding common_peak1_48_525_-0.762042752381618_8.65789761310149_12.4586287230326 chr19 57072882 57073798 + 12.4586287230326 NA intron (NM_001290813, intron 8 of 20) intron (NM_001290813, intron 8 of 20) 45684 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_63_238_0.848611077517131_8.32517234673931_12.4551418442111 chr13 47043402 47044463 + 12.4551418442111 NA promoter-TSS (NM_016785) promoter-TSS (NM_016785) 433 NM_172262 218214 Mm.31259 NM_172262 ENSMUSG00000038080 Kdm1b 4632428N09Rik|AI482520|Aof1 lysine (K)-specific demethylase 1B protein-coding unique_peak2_11_163_-1.57038884771234_6.57235758076191_12.4485808846366 chr2 146496950 146498159 + 12.4485808846366 NA intron (NM_001033348, intron 1 of 40) intron (NM_001033348, intron 1 of 40) 14450 NM_001033348 241694 Mm.222310 NM_001033348 ENSMUSG00000037110 Ralgapa2 A230067G21Rik|AS250|BC053994|RGC2|pp250 Ral GTPase activating protein, alpha subunit 2 (catalytic) protein-coding unique_peak1_28_55_1.54130839245496_6.57800911828509_12.4485808846366 chr4 125146128 125146636 + 12.4485808846366 NA Intergenic Intergenic -18501 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak2_127_1371_-0.445974569488577_10.1990774814285_12.4476070763307 chr14 10451882 10454563 + 12.4476070763307 NA intron (NM_001308285, intron 4 of 9) intron (NM_001308285, intron 4 of 9) 236 NM_001308286 14198 Mm.397619 NM_010210 ENSMUSG00000060579 Fhit AW045638|Fra14A2 fragile histidine triad gene protein-coding common_peak1_203_2259_-0.341211657802381_10.9715012284014_12.4472543737417 chr17 29171321 29172980 + 12.4472543737417 NA intron (NM_153166, intron 12 of 20) intron (NM_153166, intron 12 of 20) 37094 NM_001002786 442827 Mm.440341 NM_001002786 ENSMUSG00000064147 Rab44 9830134C10Rik RAB44, member RAS oncogene family protein-coding common_peak1_116_1248_-0.469479795846812_10.0518178636846_12.4449312298174 chr17 35235007 35236630 + 12.4449312298174 NA promoter-TSS (NM_023179) promoter-TSS (NM_023179) -3 NM_010909 18038 Mm.300795 NM_010909 ENSMUSG00000042419 Nfkbil1 Def-7|IKBL nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 protein-coding common_peak1_32_366_-0.942316305182334_8.04847810025205_12.4448442674048 chr15 5516686 5517326 + 12.4448442674048 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 20688 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_328_3833_-0.257967424976664_11.7756509091798_12.4448183768113 chr6 128624155 128628992 + 12.4448183768113 NA Intergenic Intergenic -3639 NM_010737 17057 Mm.16729 NM_010737 ENSMUSG00000030361 Klrb1a Ly55a|NKR-P1.7|NKR-P1A|NKRP12|Nkrp1-a|Nkrp1a|ly-55A killer cell lectin-like receptor subfamily B member 1A protein-coding common_peak2_106_1137_-0.493314422950808_9.90562763083118_12.4437664058694 chr18 38349411 38350898 + 12.4437664058694 NA Intergenic Intergenic -11161 NM_011937 26384 Mm.22374 NM_011937 ENSMUSG00000052102 Gnpda1 GNPDA|Gnp1|Gnpi|oscillin glucosamine-6-phosphate deaminase 1 protein-coding common_peak2_113_1215_-0.476816482707054_10.0095192720901_12.4424596315375 chr14 8172253 8174355 + 12.4424596315375 NA promoter-TSS (NM_024221) promoter-TSS (NM_024221) -312 NM_024221 68263 Mm.301527 NM_024221 ENSMUSG00000021748 Pdhb 2610103L06Rik|AL024199|C81408 pyruvate dehydrogenase (lipoamide) beta protein-coding common_peak2_172_1081_0.429725747665733_10.2943476576597_12.4415752117069 chr9 110664387 110667836 + 12.4415752117069 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 9608 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_26_307_-1.04457897385531_7.74449705376725_12.438975028382-2 chr17 56008505 56009064 + 12.438975028382 NA promoter-TSS (NM_026530) promoter-TSS (NM_026530) -417 NM_026530 68047 Mm.358710 NM_026530 ENSMUSG00000003199 Mpnd E130307M08Rik MPN domain containing protein-coding common_peak1_26_307_-1.04457897385531_7.74449705376725_12.438975028382 chr13 93762368 93763053 + 12.438975028382 NA Intergenic RLTR6_Mm|LTR|ERV1 -8969 NM_009712 11881 Mm.300178 NM_009712 ENSMUSG00000042082 Arsb 1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B protein-coding unique_peak2_6_116_-2.03702459193819_5.85185242361431_12.4386877322622 chr5 124023652 124024550 + 12.4386877322622 NA intron (NM_177876, intron 1 of 3) intron (NM_177876, intron 1 of 3) 8159 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_78_835_-0.585260040967567_9.4147291115971_12.4385191983361 chr4 150239183 150240440 + 12.4385191983361 NA intron (NM_001025388, intron 2 of 11) PB1D10|SINE|Alu 2487 NM_001025388 433182 Mm.70666 NM_001025388 ENSMUSG00000059040 Eno1b EG433182|Eno1|Gm5506 enolase 1B, retrotransposed protein-coding common_peak1_132_740_0.510570580356527_9.7886150224841_12.4372995589774 chr11 62879435 62880100 + 12.4372995589774 NA intron (NM_026210, intron 1 of 6) intron (NM_026210, intron 1 of 6) 277 NM_026210 67510 Mm.9806 NM_026210 ENSMUSG00000014177 Tvp23b 1810036I24Rik|Fam18b|Fam18b1 trans-golgi network vesicle protein 23B protein-coding common_peak2_266_1983_0.322956574530597_11.1156745976522_12.4360805246206 chr4 43453173 43458097 + 12.4360805246206 NA Intergenic B3|SINE|B2 -1009 NM_007654 12517 Mm.188157 NM_007654 ENSMUSG00000028459 Cd72 CD72c|Ly-19|Ly-32|Ly-m19|Lyb-2 CD72 antigen protein-coding common_peak2_66_709_-0.641131514242321_9.15110945727088_12.4340420869746 chr16 36040656 36042079 + 12.4340420869746 NA 5' UTR (NM_027113, exon 1 of 1) 5' UTR (NM_027113, exon 1 of 1) 177 NM_027113 69544 Mm.37802 NM_027113 ENSMUSG00000034379 Wdr5b 2310009C03Rik|AI606931 WD repeat domain 5B protein-coding unique_peak2_12_173_-1.51413456239415_6.68587621465165_12.4326341240005 chr4 63393365 63394865 + 12.4326341240005 NA intron (NM_001305432, intron 2 of 20) intron (NM_001305432, intron 2 of 20) 4125 NM_001305432 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak2_12_173_-1.51413456239415_6.68587621465165_12.4326341240005 chr4 97861122 97862054 + 12.4326341240005 NA intron (NM_010905, intron 2 of 10) B4A|SINE|B4 83962 NM_010905 18027 Mm.31274 NM_010905 ENSMUSG00000028565 Nfia 1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A nuclear factor I/A protein-coding common_peak1_168_1842_-0.380026507101304_10.6578271020801_12.4311949030984 chr14 53960451 53962009 + 12.4311949030984 NA Intergenic Intergenic 292699 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_134_756_0.506163663732183_9.81723132185182_12.4311701094151 chr12 4475948 4477854 + 12.4311701094151 NA 5' UTR (NM_010881, exon 1 of 23) 5' UTR (NM_010881, exon 1 of 23) 281 NM_010881 17977 Mm.301039 NM_010881 ENSMUSG00000020647 Ncoa1 KAT13A|NCoA-1|NRC-1|SRC-1|SRC-a|SRC1|bHLHe74|mNRC-1 nuclear receptor coactivator 1 protein-coding unique_peak2_5_106_-2.18091614068176_5.65100891606027_12.4297851512369 chr11 72202695 72203642 + 12.4297851512369 NA intron (NM_028963, intron 1 of 18) intron (NM_028963, intron 1 of 18) 203 NM_028963 74477 Mm.289697 NM_028963 ENSMUSG00000020807 4933427D14Rik C85113|Kiaa0753|MNR RIKEN cDNA 4933427D14 gene protein-coding common_peak1_17_221_-1.28973050447744_7.14955061411139_12.4296144947009 chr15 66801988 66802449 + 12.4296144947009 NA intron (NM_001029841, intron 1 of 7) intron (NM_001029841, intron 1 of 7) 29611 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_112_1203_-0.478100178587301_9.99456958746605_12.4286890361052 chr10 117223640 117225036 + 12.4286890361052 NA 5' UTR (NM_026570, exon 1 of 7) 5' UTR (NM_026570, exon 1 of 7) 169 NM_026570 64050 Mm.233529 NM_026570 ENSMUSG00000020171 Yeats4 4930573H17Rik|B230215M10Rik|GAS41|NuBI-1 YEATS domain containing 4 protein-coding common_peak1_23_278_-1.11034584373709_7.56894838996064_12.4258395700682 chr12 65074915 65075469 + 12.4258395700682 NA promoter-TSS (NM_178912) promoter-TSS (NM_178912) -414 NM_178912 104806 Mm.374847 NM_178912 ENSMUSG00000055884 Fancm AI427100|C730036B14Rik|D12Ertd364e Fanconi anemia, complementation group M protein-coding common_peak2_79_342_0.722294083830676_8.78321180808815_12.4253439251732 chr17 6467408 6468941 + 12.4253439251732 NA Intergenic Intergenic -17180 NR_033520 547127 Mm.297552 NM_001045538 Tmem181b-ps Tmem181b transmembrane protein 181B, pseudogene pseudo common_peak2_166_1819_-0.382976129398099_10.638234670387_12.4213476890145 chr5 115131751 115135164 + 12.4213476890145 NA intron (NM_175352, intron 1 of 4) intron (NM_175352, intron 1 of 4) 1518 NM_175352 106840 Mm.29241 NM_175352 ENSMUSG00000046562 Unc119b AA407659|AI414892 unc-119 lipid binding chaperone B protein-coding unique_peak2_49_535_-0.753461687135031_8.68935834689026_12.4211902475497 chr18 4294210 4296263 + 12.4211902475497 NA Intergenic Intergenic 57717 NM_007746 26410 Mm.3275 NM_007746 ENSMUSG00000024235 Map3k8 Cot|Cot/Tpl2|Est|Estf|Tpl-2|Tpl2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding unique_peak2_34_385_-0.911011322744546_8.13695137589581_12.4179629457506 chr6 48047310 48049077 + 12.4179629457506 NA promoter-TSS (NM_001081382) promoter-TSS (NM_001081382) -79 NM_001081382 72306 Mm.381553 NM_001081382 ENSMUSG00000071477 Zfp777 2500002G23Rik zinc finger protein 777 protein-coding common_peak1_412_3578_0.243721685890911_11.9272016713618_12.4174669504658 chr12 91587555 91590112 + 12.4174669504658 NA intron (NM_175335, intron 1 of 8) intron (NM_175335, intron 1 of 8) 816 NM_031391 83602 Mm.275728 NM_031391 ENSMUSG00000020962 Gtf2a1 6330549H03Rik|AA536742|AA959775|AW060250|TfIIAa/b|Tfiia1 general transcription factor II A, 1 protein-coding common_peak1_66_257_0.81931644472647_8.42088547778649_12.4166296141058 chr6 51532278 51533503 + 12.4166296141058 NA intron (NM_001127349, intron 1 of 6) intron (NM_001127349, intron 1 of 6) 8987 NM_001127349 71982 Mm.294166 NM_028035 ENSMUSG00000038301 Snx10 2410004M09Rik sorting nexin 10 protein-coding common_peak1_41_455_-0.828803059179887_8.4184884845748_12.4166296141057 chr18 5603656 5604384 + 12.4166296141057 NA intron (NM_011546, intron 1 of 7) intron (NM_011546, intron 1 of 7) -11583 NR_033552 791318 Mm.84339 NR_033552 ENSMUSG00000063087 Gm10125 ENSMUSG00000063087|Zeb1os predicted gene 10125 ncRNA common_peak2_220_1527_0.365112348013257_10.7599850020424_12.4165652204873 chr3 87524842 87529889 + 12.4165652204873 NA intron (NM_001286844, intron 2 of 4) intron (NM_001286844, intron 2 of 4) 1787 NM_012051 27049 Mm.219460 NM_012051 ENSMUSG00000003382 Etv3 AI414410|METS|Pe1 ets variant 3 protein-coding unique_peak2_39_435_-0.850437785959794_8.34296543179703_12.415953702868 chr2 125666693 125668302 + 12.415953702868 NA intron (NM_199022, intron 5 of 11) intron (NM_199022, intron 5 of 11) -5603 NM_025613 58521 Mm.425101 NM_025613 ENSMUSG00000091337 Eid1 2610002K20Rik|Cri1|EID-1|ORF12|PNAS-22|PTD014 EP300 interacting inhibitor of differentiation 1 protein-coding common_peak2_67_720_-0.637094565893939_9.17530816629385_12.4158696437047 chr9 118404269 118406456 + 12.4158696437047 NA Intergenic Intergenic -24477 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak2_151_899_0.46641994573892_10.0469911640865_12.4143141904799 chr5 107960246 107962475 + 12.4143141904799 NA intron (NM_026062, intron 1 of 4) intron (NM_026062, intron 1 of 4) 25717 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding unique_peak1_26_47_1.63724506611844_6.40358503378038_12.4140724763425 chr16 50364134 50364745 + 12.4140724763425 NA intron (NM_027444, intron 2 of 16) intron (NM_027444, intron 2 of 16) 67950 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding unique_peak1_26_47_1.63724506611844_6.40358503378038_12.4140724763425-2 chr2 26534595 26535237 + 12.4140724763425 NA Intergenic Intergenic 30989 NR_132655 102639736 NR_132655 Gm35978 - predicted gene, 35978 ncRNA common_peak2_46_505_-0.779862487268293_8.59306233106016_12.4126775967762 chr13 41249218 41250549 + 12.4126775967762 NA promoter-TSS (NM_001135577) promoter-TSS (NM_001135577) 39 NM_001135577 108934 Mm.38578 NM_001135577 ENSMUSG00000091264 Smim13 2900036K02Rik small integral membrane protein 13 protein-coding common_peak1_102_506_0.605705946773398_9.28869491039004_12.4116506493549 chr4 25281032 25282109 + 12.4116506493549 NA intron (NM_026194, intron 1 of 18) CpG 251 NM_026194 67490 Mm.226295 NM_026194 ENSMUSG00000040359 Ufl1 1810074P20Rik|AI429228|Kiaa0776|Maxer|Rcad|mKIAA0776 UFM1 specific ligase 1 protein-coding common_peak2_72_772_-0.61200557753922_9.28832181515524_12.4116506493547 chr11 104424531 104426273 + 12.4116506493547 NA intron (NM_001081045, intron 1 of 13) intron (NM_001081045, intron 1 of 13) 16889 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak2_218_2440_-0.326803037242239_11.08985506116_12.4087264488675 chr15 100226815 100229006 + 12.4087264488675 NA promoter-TSS (NM_007497) promoter-TSS (NM_007497) 51 NM_007497 11908 Mm.676 NM_007497 ENSMUSG00000023027 Atf1 - activating transcription factor 1 protein-coding common_peak1_118_628_0.550156163360356_9.57199428855947_12.4086228484181 chr1 33813281 33814598 + 12.4086228484181 NA intron (NM_001290699, intron 1 of 12) intron (NM_001290699, intron 1 of 12) 656 NM_133817 98403 Mm.289103 NM_133817 ENSMUSG00000042197 Zfp451 4930515K21Rik|4933435G09Rik|AI596398|COASTER|Kiaa0576-hp|Znf451|mKIAA1702 zinc finger protein 451 protein-coding common_peak2_199_1328_0.389726736419279_10.5709887574858_12.4063402489271 chr11 115603036 115604954 + 12.4063402489271 NA promoter-TSS (NM_001252067) promoter-TSS (NM_001252067) -79 NM_173048 260302 Mm.119479 NM_173048 ENSMUSG00000020740 Gga3 C230037M19Rik|mKIAA0154 golgi associated, gamma adaptin ear containing, ARF binding protein 3 protein-coding common_peak1_135_1461_-0.430354401419196_10.2985503952428_12.4031457037002 chr1 134082595 134084199 + 12.4031457037002 NA Intergenic Intergenic -4242 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_24_288_-1.08891049036429_7.63047043731853_12.4009529748815-2 chr7 44304463 44304947 + 12.4009529748815 NA exon (NM_009131, exon 4 of 4) exon (NM_009131, exon 4 of 4) 2254 NM_009131 20256 Mm.20428 NM_009131 ENSMUSG00000004473 Clec11a AW457320|Clecsf3|Scgf C-type lectin domain family 11, member a protein-coding common_peak1_24_288_-1.08891049036429_7.63047043731853_12.4009529748815 chr12 84772541 84773001 + 12.4009529748815 NA promoter-TSS (NM_028863) promoter-TSS (NM_028863) 341 NM_023409 67963 Mm.282556 NM_023409 ENSMUSG00000021242 Npc2 2700012J19Rik|AA408070|AU045843|HE1 Niemann-Pick type C2 protein-coding common_peak1_15_202_-1.36908265406001_6.98079459015517_12.3974997240781 chr18 39282395 39282756 + 12.3974997240781 NA intron (NM_175164, intron 17 of 22) intron (NM_175164, intron 17 of 22) 204670 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak1_471_4274_0.223654633940269_12.1735360216308_12.3943722687566 chr6 48768051 48772402 + 12.3943722687566 NA intron (NM_031247, intron 1 of 4) intron (NM_031247, intron 1 of 4) 625 NM_031247 83408 Mm.333050 NM_031247 ENSMUSG00000039264 Gimap3 2010110D23Rik|Gimap5|Ian4 GTPase, IMAP family member 3 protein-coding unique_peak1_17_17_2.33476036043036_5.33730518165749_12.3929022994335-2 chr9 118093313 118093758 + 12.3929022994335 NA intron (NM_026442, intron 2 of 3) intron (NM_026442, intron 2 of 3) 53013 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding unique_peak1_17_17_2.33476036043036_5.33730518165749_12.3929022994335 chr4 126609471 126609824 + 12.3929022994335 NA promoter-TSS (NM_001145950) promoter-TSS (NM_001145950) -207 NM_001013755 230757 Mm.296838 NM_001013755 ENSMUSG00000073755 5730409E04Rik 7530403E16Rik|AI849033 RIKEN cDNA 5730409E04Rik gene protein-coding common_peak2_192_2126_-0.351799025514413_10.8787048052035_12.3920172488958 chr2 120403348 120405910 + 12.3920172488958 NA promoter-TSS (NM_001110496) promoter-TSS (NM_001110496) -513 NM_001110496 211499 Mm.260712 NM_173734 ENSMUSG00000033808 Tmem87a A930025J12Rik transmembrane protein 87A protein-coding common_peak1_60_647_-0.675330551837652_9.0021847269658_12.3851797965089 chr4 150798920 150800100 + 12.3851797965089 NA Intergenic Intergenic 55439 NR_040649 73348 Mm.396218 NR_040649 ENSMUSG00000078492 1700045H11Rik - RIKEN cDNA 1700045H11 gene ncRNA common_peak1_215_1480_0.369688575109816_10.7172002128438_12.3850565597482 chr2 164803783 164806003 + 12.3850565597482 NA promoter-TSS (NM_178375) promoter-TSS (NM_178375) -12 NM_133240 170789 Mm.277878 NM_133240 ENSMUSG00000017307 Acot8 PTE-2|Pte1 acyl-CoA thioesterase 8 protein-coding common_peak2_55_595_-0.705991459257881_8.86617279083322_12.3839322502004 chr17 45563214 45565095 + 12.3839322502004 NA promoter-TSS (NM_028662) promoter-TSS (NM_028662) 2 NM_028662 73836 Mm.289716 NM_028662 ENSMUSG00000037089 Slc35b2 1110003M08Rik|AA407792|AI842275|PAPST1|Slc35b1 solute carrier family 35, member B2 protein-coding common_peak1_146_857_0.476176915564423_9.98292229528176_12.3797122664119 chr5 43781401 43782700 + 12.3797122664119 NA promoter-TSS (NM_001159963) promoter-TSS (NM_001159963) 99 NM_001159963 242960 Mm.25794 NM_178729 ENSMUSG00000039753 Fbxl5 Fbl4|Fir4 F-box and leucine-rich repeat protein 5 protein-coding common_peak2_134_1449_-0.431524031184381_10.2860751693101_12.3794078258096 chr6 130189285 130195045 + 12.3794078258096 NA intron (NM_010651, intron 1 of 7) intron (NM_010651, intron 1 of 7) 947 NM_010651 16640 Mm.457996 NM_010651 ENSMUSG00000033024 Klra9 LY49I1|Ly49I killer cell lectin-like receptor subfamily A, member 9 protein-coding unique_peak1_23_36_1.80432210246314_6.11161441686052_12.3790911411518 chr17 28931240 28931814 + 12.3790911411518 NA Intergenic Intergenic 10735 NM_153390 69307 Mm.107605 NM_153390 ENSMUSG00000045378 Pxt1 1700001G18Rik|Stepp peroxisomal, testis specific 1 protein-coding unique_peak1_23_36_1.80432210246314_6.11161441686052_12.3790911411518-2 chr3 27616521 27617177 + 12.3790911411518 NA intron (NM_173182, intron 3 of 25) intron (NM_173182, intron 3 of 25) -31854 NR_037275 100526525 NR_037275 ENSMUSG00000092695 Mir3092 mir-3092|mmu-mir-3092 microRNA 3092 ncRNA common_peak2_209_1423_0.376459110896777_10.6639629864148_12.3789961237963 chr1 138325802 138329622 + 12.3789961237963 NA Intergenic Intergenic 53974 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding unique_peak2_40_444_-0.836218260788335_8.37955239545959_12.3783615625506 chr14 15769150 15770733 + 12.3783615625506 NA Intergenic Intergenic -330954 NM_146052 218763 Mm.138039 NM_146052 ENSMUSG00000045201 Lrrc3b BC019794|LRP15 leucine rich repeat containing 3B protein-coding common_peak2_192_1264_0.397883622864587_10.503863481014_12.3715298252306 chr19 47089779 47091640 + 12.3715298252306 NA promoter-TSS (NM_023211) promoter-TSS (NM_023211) -57 NM_011053 18572 Mm.41166 NM_011053 ENSMUSG00000025047 Pdcd11 1110021I22Rik|ALG-4|Pdcd7|mKIAA0185 programmed cell death 11 protein-coding common_peak1_192_1264_0.397883622864587_10.503863481014_12.3715298252306 chr6 71439370 71440758 + 12.3715298252306 NA exon (NM_024288, exon 1 of 9) exon (NM_024288, exon 1 of 9) 573 NM_024288 68477 Mm.28474 NM_024288 ENSMUSG00000002222 Rmnd5a 1110007A06Rik|AJ237586|AW125795|Gid2|MTA.D02.090 required for meiotic nuclear division 5 homolog A protein-coding common_peak2_117_621_0.551367946097578_9.55645474317939_12.3690662219611 chr4 132638278 132639983 + 12.3690662219611 NA promoter-TSS (NM_010166) promoter-TSS (NM_010166) 84 NM_010166 14050 Mm.227733 NM_010166 ENSMUSG00000028886 Eya3 AI844637 EYA transcriptional coactivator and phosphatase 3 protein-coding common_peak1_56_605_-0.698675263922778_8.89383635151156_12.3663617021473 chr14 57798081 57798760 + 12.3663617021473 NA promoter-TSS (NR_037238) promoter-TSS (NR_037238) -4 NR_037238 100526476 NR_037238 ENSMUSG00000092784 Mir3077 mir-3077|mmu-mir-3077 microRNA 3077 ncRNA common_peak2_56_605_-0.698675263922778_8.89383635151156_12.3663617021473 chr17 32388499 32390007 + 12.3663617021473 NA promoter-TSS (NM_011717) promoter-TSS (NM_011717) 186 NR_033525 22404 Mm.274948 NM_011717 ENSMUSG00000024050 Wiz - widely-interspaced zinc finger motifs protein-coding common_peak2_208_2318_-0.335541488121262_11.0115163605854_12.3661288393241 chr2 181364209 181366851 + 12.3661288393241 NA promoter-TSS (NM_001165991) promoter-TSS (NM_001165991) 107 NM_001048148 229007 Mm.87720 NM_144894 ENSMUSG00000027582 Zgpat 1500006I01Rik|BC021513 zinc finger, CCCH-type with G patch domain protein-coding common_peak2_54_185_0.942132207277885_8.01022491474697_12.3609972483464 chr2 167374738 167376041 + 12.3609972483464 NA Intergenic Intergenic -26211 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak2_54_185_0.942132207277885_8.01022491474697_12.3609972483464-2 chr5 109995985 109997041 + 12.3609972483464 NA promoter-TSS (NM_145563) promoter-TSS (NM_145563) -14 NM_145563 69504 Mm.441438 NM_145563 ENSMUSG00000066613 Zfp932 2310001H12Rik|Znf431 zinc finger protein 932 protein-coding common_peak2_318_2529_0.28712305805875_11.448483198611_12.3600616000668 chr15 83170896 83173399 + 12.3600616000668 NA promoter-TSS (NM_029787) promoter-TSS (NM_029787) 61 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding common_peak1_246_1783_0.338469218551419_10.970134509196_12.3569334328638 chr19 46705925 46708636 + 12.3569334328638 NA promoter-TSS (NM_020577) promoter-TSS (NM_020577) -163 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak1_52_564_-0.726365291859437_8.77892441137283_12.356869773905 chr11 94989889 94990934 + 12.356869773905 NA promoter-TSS (NM_172261) promoter-TSS (NM_172261) -801 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding common_peak2_264_1964_0.323533755175466_11.1020804747337_12.3557736518282 chr19 4331907 4334870 + 12.3557736518282 NA intron (NM_001001984, intron 12 of 20) intron (NM_001001984, intron 12 of 20) -27166 NM_001290818 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak2_229_2574_-0.31717801479976_11.1717677095581_12.3521045990651 chr4 125175377 125179238 + 12.3521045990651 NA Intergenic Intergenic -49426 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak1_29_336_-0.987948348584156_7.90263060688978_12.3483601179943-2 chr5 77140402 77140853 + 12.3483601179943 NA Intergenic Intergenic -25504 NM_175606 74318 Mm.181852 NM_175606 ENSMUSG00000059325 Hopx 1110018K11Rik|1200015P04Rik|2300002F06Rik|AI848177|AW490897|Cameo|Hdop|Hod|Hop|Ob1|Obl|Toto HOP homeobox protein-coding common_peak1_29_336_-0.987948348584156_7.90263060688978_12.3483601179943 chr12 79646052 79646718 + 12.3483601179943 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 278348 NR_131075 77290 Mm.395042 NR_131073 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA unique_peak2_3_84_-2.56636229538524_5.12620978844508_12.347066681563 chr7 60155534 60155965 + 12.347066681563 NA Intergenic Intergenic -15530 NM_001082962 20646 Mm.274995 NM_013670 ENSMUSG00000102252 Snrpn 2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN small nuclear ribonucleoprotein N protein-coding common_peak2_59_215_0.880381241620592_8.19507812297377_12.3468780250788 chr10 42934036 42935351 + 12.3468780250788 NA intron (NM_172938, intron 5 of 8) L1MC3|LINE|L1 74181 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak2_99_484_0.617398877434605_9.23054037579179_12.3456893163396 chr4 53914467 53916521 + 12.3456893163396 NA Intergenic Intergenic 89449 NM_028053 52076 Mm.27184 NM_028053 ENSMUSG00000028420 Tmem38b 1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b transmembrane protein 38B protein-coding common_peak1_31_68_1.41434111753335_6.81569501554485_12.3447381238169 chr1 160299558 160300185 + 12.3447381238169 NA intron (NM_001038621, intron 2 of 8) intron (NM_001038621, intron 2 of 8) -3899 NR_035448 100316784 NR_035448 ENSMUSG00000089204 Mir1927 mmu-mir-1927 microRNA 1927 ncRNA common_peak2_135_1460_-0.429367268270257_10.2980568286684_12.3433872537897 chr3 96696079 96697944 + 12.3433872537897 NA promoter-TSS (NM_001165949) promoter-TSS (NM_001165949) -65 NM_001165949 229615 Mm.1635 NM_018812 ENSMUSG00000028101 Pias3 Pias3l protein inhibitor of activated STAT 3 protein-coding common_peak2_114_1224_-0.471999642918103_10.0225662124309_12.337810991278 chr15 57975288 57977323 + 12.337810991278 NA Intergenic Intergenic -9598 NM_173862 239463 Mm.221241 NM_173862 ENSMUSG00000051225 Fam83a - family with sequence similarity 83, member A protein-coding common_peak1_182_2005_-0.361451923411925_10.7893799289062_12.3365977099648 chr14 70288439 70290087 + 12.3365977099648 NA 5' UTR (NM_008915, exon 1 of 14) 5' UTR (NM_008915, exon 1 of 14) 234 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak2_60_221_0.870103584696866_8.22946765869854_12.3323512928711 chr11 49054024 49055671 + 12.3323512928711 NA intron (NM_010999, intron 1 of 5) L1_Mus3|LINE|L1 -3605 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5|OTTMUSG00000005540 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak2_136_774_0.498285056373259_9.84719502834823_12.3322716810368 chr8 121107369 121109003 + 12.3322716810368 NA intron (NM_001166482, intron 1 of 8) CpG 193 NM_172761 234814 Mm.31690 NM_172761 ENSMUSG00000031816 Mthfsd AW049977|BC052066|C920004D05 methenyltetrahydrofolate synthetase domain containing protein-coding common_peak1_28_326_-1.00448351098551_7.85090507000533_12.3281829038938 chr14 55724763 55725419 + 12.3281829038938 NA Intergenic Intergenic -2915 NM_019519 56187 Mm.87216 NM_019519 ENSMUSG00000040472 Rabggta gm Rab geranylgeranyl transferase, a subunit protein-coding common_peak1_43_474_-0.805373649338003_8.48909687854931_12.3279173172015 chr19 5601774 5602600 + 12.3279173172015 NA TTS (NM_178637) TTS (NM_178637) 314 NM_026616 68209 Mm.246200 NM_026616 ENSMUSG00000024925 Rnaseh2c 1500026D16Rik|AYP1 ribonuclease H2, subunit C protein-coding common_peak1_257_1894_0.328491864535135_11.052228065326_12.3273320807101 chr4 40970204 40971875 + 12.3273320807101 NA promoter-TSS (NM_023739) promoter-TSS (NM_023739) 96 NM_023739 74164 Mm.247456 NM_023739 ENSMUSG00000028423 Nfx1 1300017N15Rik|3000003M19Rik|NFX.1|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding common_peak2_316_2508_0.288018202849678_11.436905856834_12.3272119346449 chr11 98201633 98204818 + 12.3272119346449 NA promoter-TSS (NM_001109628) promoter-TSS (NM_001109628) -80 NM_001109628 69131 Mm.260516 NM_026952 ENSMUSG00000003119 Cdk12 1810022J16Rik|AI646528|Crk7|Crkrs|D11Ertd752e|Pksc cyclin-dependent kinase 12 protein-coding common_peak1_32_365_-0.938379890623163_8.04650989297246_12.326392136143 chr14 66186274 66186935 + 12.326392136143 NA intron (NM_172498, intron 5 of 29) intron (NM_172498, intron 5 of 29) 26948 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_55_191_0.928214560483125_8.04906978096272_12.3263921361429 chr17 17587206 17588303 + 12.3263921361429 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 36735 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak2_222_1548_0.361362445164835_10.777802651372_12.3230196413416 chr14 67840563 67844584 + 12.3230196413416 NA intron (NM_177780, intron 7 of 51) intron (NM_177780, intron 7 of 51) 17172 NR_105857 102465310 NR_105857 ENSMUSG00000098866 Mir6539 Gm27464|mir-6539|mmu-mir-6539 microRNA 6539 ncRNA common_peak2_237_1694_0.346615123402293_10.9003771197249_12.3195597987463 chr5 106695347 106697546 + 12.3195597987463 NA intron (NM_026856, intron 1 of 6) CpG 384 NM_026856 52397 Mm.249474 NM_026856 ENSMUSG00000049606 Zfp644 1110068L01Rik|AA408882|BM-005|D5Ertd689e|Zep-2 zinc finger protein 644 protein-coding common_peak1_42_120_1.12686393297936_7.48229520376427_12.3185443928512 chr7 31115470 31116306 + 12.3185443928512 NA promoter-TSS (NM_008281) promoter-TSS (NM_008281) -562 NM_001110252 15451 Mm.19182 NM_008281 ENSMUSG00000001249 Hpn Hlb320 hepsin protein-coding common_peak2_158_960_0.451483660822648_10.1341344511851_12.3164269177631 chr15 35370663 35372236 + 12.3164269177631 NA promoter-TSS (NM_177151) promoter-TSS (NM_177151) -97 NM_177151 666173 Mm.309250 NM_177151 ENSMUSG00000037646 Vps13b 1810042B05Rik|2310042E16Rik|4732488H20|C330002D13Rik|C87206|Coh1|D230005K13|mKIAA0532|mKIAA5032 vacuolar protein sorting 13B protein-coding common_peak1_83_887_-0.563716600178894_9.51255756626066_12.312310367784 chr19 57355101 57356459 + 12.312310367784 NA intron (NR_040316, intron 1 of 2) intron (NR_040316, intron 1 of 2) 5119 NR_040316 320879 Mm.375089 NR_040316 ENSMUSG00000097785 B230217O12Rik - RIKEN cDNA B230217O12 gene ncRNA common_peak2_178_1958_-0.366357096844819_10.7527231338452_12.3105795269026 chr13 51650540 51652635 + 12.3105795269026 NA promoter-TSS (NM_029279) promoter-TSS (NM_029279) -121 NM_001308448 75420 Mm.275981 NM_029279 ENSMUSG00000035139 Secisbp2 2210413N07Rik|2810012K13Rik|SBP2 SECIS binding protein 2 protein-coding common_peak2_54_584_-0.711001796084851_8.83679191642834_12.3100761361159 chr18 12988630 12990926 + 12.3100761361159 NA exon (NM_008378, exon 10 of 11) exon (NM_008378, exon 10 of 11) -17212 NM_153087 225192 Mm.207073 NM_153087 ENSMUSG00000037346 Hrh4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding common_peak1_26_306_-1.03988727853058_7.74215120610489_12.3100030405816 chr10 41529636 41530255 + 12.3100030405816 NA 3' UTR (NM_016898, exon 6 of 6) 3' UTR (NM_016898, exon 6 of 6) 10445 NM_016898 53599 Mm.269815 NM_016898 ENSMUSG00000019818 Cd164 A115|A24|AA589639|AW540279|MGC-24|MSSP CD164 antigen protein-coding common_peak1_26_306_-1.03988727853058_7.74215120610489_12.3100030405816-2 chrX 107088636 107089305 + 12.3100030405816 NA promoter-TSS (NM_172435) promoter-TSS (NM_172435) -365 NM_172435 78826 Mm.74639 NM_172435 ENSMUSG00000050921 P2ry10 5830408N17Rik|Lypsr2|P2Y10 purinergic receptor P2Y, G-protein coupled 10 protein-coding common_peak1_63_239_0.842587289889361_8.3281842405532_12.3085585340207 chr6 122288594 122289595 + 12.3085585340207 NA Intergenic Lx4A|LINE|L1 -6261 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak2_405_3500_0.24526038853589_11.8961815406964_12.3082744810955 chr13 113045649 113053193 + 12.3082744810955 NA intron (NM_001281487, intron 2 of 11) intron (NM_001281487, intron 2 of 11) -3033 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak1_82_876_-0.566927163276384_9.49296945080654_12.3072614220804 chr1 170978919 170980138 + 12.3072614220804 NA Intergenic MIRb|SINE|MIR -3457 NM_010187 14130 Mm.425062 NM_010187 ENSMUSG00000026656 Fcgr2b AI528646|CD32|F630109E10Rik|Fc[g]RII|FcgRII|Fcgr2|Fcgr2a|Fcr-2|Fcr-3|Ly-17|Ly-m20|LyM-1|Lym-1|fcRII Fc receptor, IgG, low affinity IIb protein-coding unique_peak2_39_434_-0.847125051918958_8.34130906477661_12.3072017836635 chr15 97836387 97838229 + 12.3072017836635 NA intron (NM_001204275, intron 1 of 24) intron (NM_001204275, intron 1 of 24) -5541 NM_001204276 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak1_80_350_0.711014862688318_8.81083465164872_12.3054994203756 chr10 59221115 59222224 + 12.3054994203756 NA promoter-TSS (NM_172939) promoter-TSS (NM_172939) 178 NM_001024911 103080 Mm.346842 NM_001024910 ENSMUSG00000019917 Sept10 4921515A04Rik|9430099J10Rik|AA408298|AI874685 septin 10 protein-coding common_peak1_22_33_1.85099796284317_6.01296182267192_12.3035606989652 chr17 72965447 72965953 + 12.3035606989652 NA Intergenic Intergenic 47395 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_34_384_-0.90726892105873_8.1350801750529_12.3025204857075 chr17 87368805 87369313 + 12.3025204857075 NA intron (NM_028639, intron 18 of 19) intron (NM_028639, intron 18 of 19) 58682 NM_029298 75467 Mm.50108 NM_029298 ENSMUSG00000036557 Stpg4 1700011E24Rik|GSE sperm tail PG rich repeat containing 4 protein-coding common_peak2_78_336_0.725494309931458_8.75935193614759_12.3018042508821 chr3 89250741 89252453 + 12.3018042508821 NA Intergenic Intergenic 5124 NM_001310625 66059 Mm.177991 NM_025327 ENSMUSG00000042747 Krtcap2 0610010I12Rik|Kcp2 keratinocyte associated protein 2 protein-coding common_peak1_109_1168_-0.483155884959384_9.94948127205196_12.2998043489161 chr15 27640572 27642406 + 12.2998043489161 NA Intergenic Intergenic -10796 NM_001013792 432940 Mm.309164 NM_001013792 ENSMUSG00000046034 Otulin C79097|Fam105b|m3Sapc|m7-1Sapc OTU deubiquitinase with linear linkage specificity protein-coding common_peak1_227_1597_0.35567164899491_10.8198875174254_12.2979822258938 chr9 92457046 92458509 + 12.2979822258938 NA 5' UTR (NM_178711, exon 1 of 9) 5' UTR (NM_178711, exon 1 of 9) 399 NM_178711 235527 Mm.55289 NM_178711 ENSMUSG00000032377 Plscr4 AV245873 phospholipid scramblase 4 protein-coding common_peak1_112_1201_-0.475701682538785_9.99337033944179_12.2970808100922 chr17 35836808 35838366 + 12.2970808100922 NA intron (NM_011655, intron 1 of 3) intron (NM_011655, intron 1 of 3) 714 NM_011655 22154 Mm.273538 NM_011655 ENSMUSG00000001525 Tubb5 AA408537|AI596182|B130022C14Rik|M(beta)5 tubulin, beta 5 class I protein-coding common_peak2_184_2028_-0.358663911666929_10.8072211939232_12.2967694380652 chr10 80576189 80579568 + 12.2967694380652 NA promoter-TSS (NM_078477) promoter-TSS (NM_078477) -582 NM_078477 118445 Mm.41513 NM_078477 ENSMUSG00000035397 Klf16 AI843742|BTEB4|DRRF Kruppel-like factor 16 protein-coding common_peak1_56_197_0.915142099470564_8.08692766981489_12.2967006092874 chr15 99648639 99649357 + 12.2967006092874 NA intron (NM_012025, intron 1 of 17) intron (NM_012025, intron 1 of 17) 2658 NM_001253808 26934 Mm.273804 NM_012025 ENSMUSG00000023015 Racgap1 AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478 Rac GTPase-activating protein 1 protein-coding common_peak2_56_197_0.915142099470564_8.08692766981489_12.2967006092874 chr11 118200693 118202151 + 12.2967006092874 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 11320 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak2_133_1436_-0.431688335121256_10.2730001788967_12.2958141188304 chr18 12235530 12237334 + 12.2958141188304 NA promoter-TSS (NM_008720) promoter-TSS (NM_008720) -46 NM_008720 18145 Mm.3484 NM_008720 ENSMUSG00000024413 Npc1 A430089E03Rik|C85354|D18Ertd139e|D18Ertd723e|lcsd|nmf164|spm Niemann-Pick type C1 protein-coding common_peak1_210_2340_-0.33230987997305_11.0267542791255_12.2919461097078 chr11 69095131 69096268 + 12.2919461097078 NA Intergenic Intergenic -3257 NM_011065 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding common_peak1_23_277_-1.10516560463141_7.5663582704078_12.2906072623549 chr16 77015868 77016376 + 12.2906072623549 NA intron (NM_013918, intron 1 of 23) intron (NM_013918, intron 1 of 23) 2053 NM_013918 30940 Mm.40986 NM_013918 ENSMUSG00000022867 Usp25 - ubiquitin specific peptidase 25 protein-coding common_peak2_50_544_-0.742441642536832_8.71889159839587_12.2901155030873 chr9 89220082 89221951 + 12.2901155030873 NA intron (NM_026829, intron 2 of 2) intron (NM_026829, intron 2 of 2) 9826 NM_026829 107885 Mm.486274 NM_026829 ENSMUSG00000066442 Mthfs 1110034I12Rik|2310020H23Rik|AI119695 5, 10-methenyltetrahydrofolate synthetase protein-coding common_peak1_108_552_0.580606565294929_9.40143895288217_12.2896982662709 chr11 115932999 115934405 + 12.2896982662709 NA promoter-TSS (NM_020483) promoter-TSS (NM_020483) 43 NM_020483 57230 Mm.267810 NM_020483 ENSMUSG00000020755 Sap30bp 2700016D05Rik|Hcngp SAP30 binding protein protein-coding common_peak1_154_1677_-0.397739208827197_10.5136573960262_12.2892072272463 chr2 39007503 39009159 + 12.2892072272463 NA exon (NM_028809, exon 1 of 4) exon (NM_028809, exon 1 of 4) 192 NM_028809 74192 Mm.38155 NM_028809 ENSMUSG00000026755 Arpc5l 2010015J01Rik|AI852867|ARC16-2|AW555592|AW742746 actin related protein 2/3 complex, subunit 5-like protein-coding common_peak1_105_1124_-0.493355209474931_9.88903168136693_12.2857585647224 chr4 135168055 135169238 + 12.2857585647224 NA intron (NM_019732, intron 4 of 5) intron (NM_019732, intron 4 of 5) 48001 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_182_2004_-0.360732554142027_10.7890202442713_12.2856820975809 chr10 61325354 61329662 + 12.2856820975809 NA intron (NM_013753, intron 18 of 19) intron (NM_013753, intron 18 of 19) 29672 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding unique_peak1_15_12_2.59581354498408_4.99834649063313_12.2847080643831 chr11 5792150 5792619 + 12.2847080643831 NA intron (NM_013810, intron 2 of 12) intron (NM_013810, intron 2 of 12) 3901 NM_013810 13169 Mm.256925 NM_013810 ENSMUSG00000020476 Dbnl Abp1|SH3P7|mAbp1 drebrin-like protein-coding unique_peak1_15_12_2.59581354498408_4.99834649063313_12.2847080643831-2 chrX 73880395 73880746 + 12.2847080643831 NA intron (NM_008478, intron 1 of 28) intron (NM_008478, intron 1 of 28) 264 NM_008478 16728 Mm.260568 NM_008478 ENSMUSG00000031391 L1cam CD171|L1|N-CAM-L1|NCAM-L1 L1 cell adhesion molecule protein-coding unique_peak1_25_44_1.66356814831126_6.3236371704853_12.2842298853992 chr19 46601209 46601787 + 12.2842298853992 NA intron (NM_146099, intron 1 of 3) intron (NM_146099, intron 1 of 3) 2392 NM_146099 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_25_44_1.66356814831126_6.3236371704853_12.2842298853992 chr7 100465180 100465714 + 12.2842298853992 NA intron (NM_001017985, intron 32 of 32) intron (NM_001017985, intron 32 of 32) -7544 NM_009464 22229 Mm.6254 NM_009464 ENSMUSG00000032942 Ucp3 AI645527|Slc25a9|UCP-3 uncoupling protein 3 (mitochondrial, proton carrier) protein-coding common_peak1_13_182_-1.45574739945247_6.78782613855781_12.2838658833959 chr9 110646136 110646475 + 12.2838658833959 NA intron (NM_183276, intron 1 of 53) (TATG)n|Simple_repeat|Simple_repeat 7856 NM_183276 235627 Mm.335481 NM_183276 ENSMUSG00000056724 Nbeal2 1110014F23Rik|BC042396|mKIAA0540 neurobeachin-like 2 protein-coding common_peak2_63_676_-0.653534138077116_9.07624495453644_12.2824371284357 chr5 114126826 114128460 + 12.2824371284357 NA exon (NM_175016, exon 2 of 4) exon (NM_175016, exon 2 of 4) 533 NM_175016 231642 Mm.332593 NM_175016 ENSMUSG00000044339 Alkbh2 9530023G02|AU016977|Abh2|mABH2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase protein-coding unique_peak1_18_20_2.20804678061813_5.49634081308783_12.2812518011542-3 chr7 58740139 58740626 + 12.2812518011542 NA exon (NM_009728, exon 2 of 21) exon (NM_009728, exon 2 of 21) 82180 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak1_18_20_2.20804678061813_5.49634081308783_12.2812518011542-2 chr11 121848128 121848481 + 12.2812518011542 NA Intergenic Intergenic 18086 NM_029049 74675 Mm.61213 NM_029049 ENSMUSG00000039198 Ptchd3 4930451E13Rik|4933440L20Rik|RNDEu-3 patched domain containing 3 protein-coding unique_peak1_18_20_2.20804678061813_5.49634081308783_12.2812518011542 chr11 49855907 49856335 + 12.2812518011542 NA intron (NM_001163671, intron 2 of 11) intron (NM_001163671, intron 2 of 11) 9370 NM_016961 26420 Mm.68933 NM_016961 ENSMUSG00000020366 Mapk9 AI851083|JNK2|Prkm9|p54aSAPK mitogen-activated protein kinase 9 protein-coding common_peak2_208_1415_0.376140066441746_10.6556755833039_12.278952395133 chr10 39388932 39394829 + 12.278952395133 NA intron (NM_008054, intron 1 of 13) intron (NM_008054, intron 1 of 13) 22081 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_36_91_1.2562216951544_7.15167280363421_12.2786341419206 chr5 113158319 113158887 + 12.2786341419206 NA intron (NM_172884, intron 1 of 7) MIR|SINE|MIR 4710 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak1_85_384_0.683624845858041_8.93052705851128_12.277696438704 chr6 134932228 134933325 + 12.277696438704 NA intron (NR_037956, intron 1 of 1) ID_B1|SINE|B4 3684 NR_037955 381822 Mm.5935 NR_037955 ENSMUSG00000098318 Lockd 1190002F15Rik|AI120476|Droc lncRNA downstream of Cdkn1b ncRNA common_peak2_175_1921_-0.368757944520731_10.7240136485134_12.2760675644705 chr4 46525016 46529133 + 12.2760675644705 NA intron (NM_029077, intron 2 of 5) intron (NM_029077, intron 2 of 5) 9067 NM_029077 74735 Mm.240252 NM_029077 ENSMUSG00000039853 Trim14 5830400N10Rik|pub tripartite motif-containing 14 protein-coding common_peak1_38_423_-0.854977004955338_8.30043195208553_12.2757753797401 chr5 72634208 72634854 + 12.2757753797401 NA intron (NM_007723, intron 1 of 8) B3|SINE|B2 8221 NM_007723 12788 Mm.436652 NM_007723 ENSMUSG00000067220 Cnga1 Cncg cyclic nucleotide gated channel alpha 1 protein-coding common_peak1_66_258_0.813735412463169_8.42367599391814_12.2756517372018 chr9 42471620 42472521 + 12.2756517372018 NA 5' UTR (NM_173038, exon 1 of 8) 5' UTR (NM_173038, exon 1 of 8) 156 NM_173038 272589 Mm.34483 NM_173038 ENSMUSG00000037287 Tbcel D330014K23|E130107N23Rik|Lrrc35 tubulin folding cofactor E-like protein-coding common_peak2_52_174_0.964530653610783_7.93347643863772_12.275567244015 chr3 96414331 96415073 + 12.275567244015 NA non-coding (NR_001579, exon 1 of 1) non-coding (NR_001579, exon 1 of 1) 131 NR_001579 21748 NR_001579 ENSMUSG00000064796 Terc mTER|mTR telomerase RNA component ncRNA common_peak1_147_866_0.47312009036229_9.99644822840298_12.2736800138911 chr12 79351992 79353552 + 12.2736800138911 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 55421 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak1_64_246_0.828547288748219_8.36264087595879_12.2704962869021 chr11 21179917 21181095 + 12.2704962869021 NA Intergenic B1_Mur2|SINE|Alu -58526 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding unique_peak1_30_64_1.44431439170585_6.74452500888138_12.2699381711487 chr18 35837157 35837699 + 12.2699381711487 NA intron (NM_133687, intron 1 of 2) intron (NM_133687, intron 1 of 2) 7610 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_30_64_1.44431439170585_6.74452500888138_12.2699381711487 chr1 181459830 181460373 + 12.2699381711487 NA 3' UTR (NM_001160212, exon 5 of 5) 3' UTR (NM_001160212, exon 5 of 5) 51350 NM_207280 403180 Mm.220754 NM_207280 ENSMUSG00000050625 Ccdc121 6530421E24Rik|Gm755 coiled-coil domain containing 121 protein-coding common_peak2_75_801_-0.593869600685316_9.35052362611226_12.2681928185574 chrX 37084033 37086344 + 12.2681928185574 NA promoter-TSS (NM_026055) promoter-TSS (NM_026055) 34 NM_026055 67248 Mm.30478 NM_026055 ENSMUSG00000079641 Rpl39 2810465O16Rik ribosomal protein L39 protein-coding common_peak1_24_287_-1.08390980930593_7.62797009678935_12.2681386628905 chr17 88111278 88111921 + 12.2681386628905 NA Intergenic (A)n|Simple_repeat|Simple_repeat -13913 NM_001190356 225058 Mm.312053 NM_001190356 Gm4832 EG225058 predicted gene 4832 protein-coding common_peak2_69_277_0.789116952986383_8.5134995492167_12.2678459028769 chr4 99828639 99830090 + 12.2678459028769 NA promoter-TSS (NM_026348) promoter-TSS (NM_026348) -136 NM_145549 230500 Mm.331727 NM_145549 ENSMUSG00000073791 Efcab7 mKIAA1799 EF-hand calcium binding domain 7 protein-coding common_peak1_149_1618_-0.404125250826542_10.4588246448893_12.2652705785282 chr6 5297025 5298769 + 12.2652705785282 NA intron (NM_183308, intron 1 of 8) intron (NM_183308, intron 1 of 8) 476 NM_183308 330260 Mm.126984 NM_183308 ENSMUSG00000032667 Pon2 6330405I24Rik|AI481612 paraoxonase 2 protein-coding common_peak2_77_823_-0.586944766389001_9.39302814398872_12.263624728799 chr15 99074005 99075471 + 12.263624728799 NA promoter-TSS (NM_001162506) promoter-TSS (NM_001162506) -235 NM_001162506 78733 Mm.124905 NM_030159 ENSMUSG00000032783 Troap AW476063|E130301L11Rik|tastin trophinin associated protein protein-coding unique_peak2_12_172_-1.50581929418215_6.68171858054565_12.2631021900644 chr9 108163197 108164209 + 12.2631021900644 NA intron (NM_007567, intron 1 of 11) intron (NM_007567, intron 1 of 11) 26680 NM_007567 12217 Mm.20425 NM_007567 ENSMUSG00000032589 Bsn - bassoon protein-coding common_peak1_22_268_-1.13300155846311_7.50496158332507_12.261099665258-2 chrX 103981501 103981891 + 12.261099665258 NA promoter-TSS (NM_011276) promoter-TSS (NM_011276) -412 NM_011276 19820 Mm.427762 NM_011276 ENSMUSG00000056537 Rlim AL022832|AW743871|Ha1r|Rlim1|Rnf12 ring finger protein, LIM domain interacting protein-coding common_peak1_22_268_-1.13300155846311_7.50496158332507_12.261099665258 chr7 118114540 118115196 + 12.261099665258 NA intron (NM_170669, intron 2 of 4) intron (NM_170669, intron 2 of 4) 1279 NM_170669 267019 Mm.288212 NM_170669 ENSMUSG00000008683 Rps15a A630031B11Rik ribosomal protein S15A protein-coding common_peak1_65_697_-0.643150967362416_9.12550774252844_12.2606822307324-2 chr15 73137738 73138900 + 12.2606822307324 NA intron (NM_153178, intron 2 of 18) intron (NM_153178, intron 2 of 18) 46628 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_65_697_-0.643150967362416_9.12550774252844_12.2606822307324 chr11 103266491 103267483 + 12.2606822307324 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 414 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak1_48_523_-0.756546764626766_8.65514961922407_12.260238578115 chr2 144266773 144267656 + 12.260238578115 NA intron (NM_001199188, intron 2 of 13) intron (NM_001199188, intron 2 of 13) -1012 NR_030762 100313519 Mm.453538 NR_030762 ENSMUSG00000077714 Snord17 MBI-43 small nucleolar RNA, C/D box 17 snoRNA common_peak1_73_780_-0.602782775744213_9.30778735026987_12.2597240725122 chr9 66946051 66946923 + 12.2597240725122 NA intron (NM_001311101, intron 1 of 4) CpG 411 NM_026467 67941 Mm.30120 NM_026467 ENSMUSG00000036781 Rps27l 1810034D23Rik ribosomal protein S27-like protein-coding common_peak1_96_1026_-0.518882102954786_9.7447794148408_12.2593934750464 chr18 36678272 36679514 + 12.2593934750464 NA promoter-TSS (NM_001083317) promoter-TSS (NM_001083317) -322 NM_001083317 67843 Mm.273350 NM_026404 ENSMUSG00000033272 Slc35a4 2610030J16Rik solute carrier family 35, member A4 protein-coding common_peak2_209_1425_0.374434275419286_10.6649754041535_12.2581840252342 chr14 29967382 29969543 + 12.2581840252342 NA promoter-TSS (NM_019979) promoter-TSS (NM_019979) 82 NM_019979 80795 Mm.104491 NM_019979 ENSMUSG00000042682 Selenok 1110001C03Rik|AA673253|HSPC030|Hsp30|Selk selenoprotein K protein-coding common_peak1_68_271_0.795132478996456_8.48502908074857_12.256929332148 chr1 69687043 69688003 + 12.256929332148 NA Intergenic Intergenic -1563 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding common_peak2_116_614_0.552635365534544_9.54076028299387_12.2541910009792 chr2 28640374 28641952 + 12.2541910009792 NA promoter-TSS (NM_001289575) promoter-TSS (NM_001289575) -70 NM_001289575 64930 Mm.224354 NM_022887 ENSMUSG00000026812 Tsc1 - tuberous sclerosis 1 protein-coding unique_peak2_30_345_-0.967946022902419_7.95065521618552_12.2535411114008 chr10 63231228 63232965 + 12.2535411114008 NA Intergenic RSINE1|SINE|B4 -11701 NM_030114 67345 Mm.234437 NM_026101 ENSMUSG00000020064 Herc4 1700056O17Rik|4921531D01Rik|9530080M15Rik|mKIAA1593 hect domain and RLD 4 protein-coding unique_peak2_30_345_-0.967946022902419_7.95065521618552_12.2535411114008-2 chr9 40448440 40450161 + 12.2535411114008 NA intron (NM_172768, intron 1 of 19) intron (NM_172768, intron 1 of 19) 6464 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak1_33_374_-0.920598213222716_8.09044767877188_12.2533459406143 chr5 31288233 31288962 + 12.2533459406143 NA intron (NM_026298, intron 1 of 47) intron (NM_026298, intron 1 of 47) 2517 NM_026298 67661 Mm.293023 NM_026298 ENSMUSG00000038564 Ift172 4930553F24Rik|Slb|avc1|wim intraflagellar transport 172 protein-coding common_peak1_176_1933_-0.367711158281733_10.733516500336_12.2505344568888 chr11 53763201 53764809 + 12.2505344568888 NA promoter-TSS (NR_106131) promoter-TSS (NR_106131) -351 NR_106131 102465772 NR_106131 ENSMUSG00000099153 Mir7671 Gm27802|mmu-mir-7671 microRNA 7671 ncRNA common_peak2_160_1745_-0.387840930270462_10.5759173784942_12.2498587826649 chr18 34758109 34760192 + 12.2498587826649 NA intron (NM_175104, intron 1 of 4) intron (NM_175104, intron 1 of 4) 244 NM_175104 66306 Mm.29424 NM_175104 ENSMUSG00000034300 Fam53c 2810012G03Rik|Gm21179 family with sequence similarity 53, member C protein-coding common_peak1_162_1769_-0.38568920104899_10.5966890444459_12.2497751361277 chr8 57426720 57428774 + 12.2497751361277 NA Intergenic L1MB2|LINE|L1 -28176 NM_009136 20284 Mm.12886 NM_009136 ENSMUSG00000031610 Scrg1 AW124307 scrapie responsive gene 1 protein-coding common_peak2_70_749_-0.617587239536226_9.24195316561513_12.2469200771083 chr7 27507314 27509065 + 12.2469200771083 NA intron (NM_198048, intron 5 of 6) CpG-12884 8865 NM_019412 19153 Mm.10119 NM_019412 ENSMUSG00000053198 Prx L-Periaxin periaxin protein-coding common_peak2_184_1192_0.407510910394503_10.4241337828925_12.2468734539415 chr17 35088698 35090069 + 12.2468734539415 NA promoter-TSS (NM_178592) promoter-TSS (NM_178592) 92 NM_178592 193742 Mm.43745 NM_178592 ENSMUSG00000007036 Abhd16a AI326074|Bat-5|Bat5|D17H6S82E|NG26 abhydrolase domain containing 16A protein-coding common_peak1_110_1179_-0.480652976884508_9.96424465580695_12.2461937632084 chr2 179976764 179977550 + 12.2461937632084 NA promoter-TSS (NM_001081092) promoter-TSS (NM_001081092) 304 NR_033782 66730 Mm.31773 NR_033782 ENSMUSG00000085704 4921531C22Rik - RIKEN cDNA 4921531C22 gene ncRNA common_peak1_90_420_0.654668619653652_9.04501073289322_12.2420680740163 chr5 121204497 121205292 + 12.2420680740163 NA intron (NM_011290, intron 1 of 6) CpG 393 NM_011290 19988 Mm.262021 NM_011290 ENSMUSG00000029614 Rpl6 Taxreb107 ribosomal protein L6 protein-coding common_peak1_35_86_1.2883541772103_7.08712058445388_12.2415913326483 chr9 21261123 21261919 + 12.2415913326483 NA Intergenic ID_B1|SINE|B4 -3764 NM_153583 235040 Mm.440165 NM_153583 ENSMUSG00000002820 Atg4d 9830134P12Rik|APG4-D|Apg4d|Atg4dl|Autl4 autophagy related 4D, cysteine peptidase protein-coding common_peak1_131_1413_-0.435021834775808_10.2480554874215_12.239583876595 chr7 38107707 38108699 + 12.239583876595 NA promoter-TSS (NM_007633) promoter-TSS (NM_007633) -713 NM_007633 12447 Mm.16110 NM_007633 ENSMUSG00000002068 Ccne1 AW538188|CycE1 cyclin E1 protein-coding common_peak2_276_2089_0.312932822079285_11.1857536380079_12.2384775579365 chr1 52231668 52234004 + 12.2384775579365 NA exon (NM_001081081, exon 1 of 18) exon (NM_001081081, exon 1 of 18) 396 NM_001081081 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding unique_peak2_6_115_-2.02464086748236_5.84566056138639_12.2349440892964 chr17 35460462 35461499 + 12.2349440892964 NA Intergenic ORR1C1|LTR|ERVL-MaLR -9109 NM_010391 15007 Mm.88795 NM_010391 ENSMUSG00000067235 H2-Q10 H-2Q10|Q10|Qa10 histocompatibility 2, Q region locus 10 protein-coding common_peak2_83_371_0.69154045506318_8.88492903863962_12.2318544135433 chr7 132786328 132788539 + 12.2318544135433 NA promoter-TSS (NM_175268) promoter-TSS (NM_175268) -498 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_19_238_-1.20973258034997_7.29600051780576_12.2305652047224 chr11 5737411 5737949 + 12.2305652047224 NA intron (NM_001077661, intron 1 of 5) B3|SINE|B2 3496 NM_178623 72046 Mm.271657 NM_178623 ENSMUSG00000049680 Urgcp 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 upregulator of cell proliferation protein-coding common_peak1_29_335_-0.983660990181057_7.90048692768823_12.2253588477001-2 chr12 25254580 25255281 + 12.2253588477001 NA Intergenic Intergenic 125756 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_29_335_-0.983660990181057_7.90048692768823_12.2253588477001 chr11 115199423 115200005 + 12.2253588477001 NA intron (NM_001033393, intron 3 of 9) intron (NM_001033393, intron 3 of 9) 12227 NM_001033393 320534 Mm.260587 NM_001033393 ENSMUSG00000045980 Tmem104 C630005D06Rik|mFLJ00021 transmembrane protein 104 protein-coding common_peak1_262_1946_0.323403850555167_11.0887390939979_12.2239539775743 chr11 120989525 120991892 + 12.2239539775743 NA intron (NM_027874, intron 1 of 9) (CCCCG)n|Simple_repeat|Simple_repeat 625 NM_139059 104318 Mm.216227 NM_027874 ENSMUSG00000025162 Csnk1d 1200006A05Rik|AA409348|D930010H05Rik casein kinase 1, delta protein-coding common_peak2_232_1647_0.34961103369063_10.8613060440285_12.2225024999585 chr12 32206471 32210226 + 12.2225024999585 NA promoter-TSS (NM_001146201) promoter-TSS (NM_001146201) -10 NM_001146201 30955 Mm.101369 NM_020272 ENSMUSG00000020573 Pik3cg 5830428L06Rik|PI3Kgamma|p110gamma phosphoinositide-3-kinase, catalytic, gamma polypeptide protein-coding common_peak1_88_939_-0.543498577800811_9.60476765766459_12.2193494355323 chr10 81626871 81628225 + 12.2193494355323 NA promoter-TSS (NM_001163430) promoter-TSS (NM_001163430) 60 NM_181586 50721 Mm.25643 NM_181586 ENSMUSG00000034748 Sirt6 2810449N18Rik|AI043036|Sir2l6 sirtuin 6 protein-coding common_peak2_135_767_0.498410693812085_9.8341678476272_12.2167927398244 chr1 118458643 118460119 + 12.2167927398244 NA promoter-TSS (NR_027901) promoter-TSS (NR_027901) -116 NR_027901 68204 Mm.443536 NR_027901 ENSMUSG00000107722 2900060B14Rik - RIKEN cDNA 2900060B14 gene ncRNA common_peak2_59_635_-0.677614211500295_8.97407584953421_12.2141616325205 chr4 133909951 133911618 + 12.2141616325205 NA Intergenic CpG -22987 NM_009097 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_93_993_-0.527358642949912_9.69342272008733_12.2114218754526 chrX 103615654 103617983 + 12.2114218754526 NA intron (NR_028380, intron 1 of 10) intron (NR_028380, intron 1 of 10) 6936 NR_028381 78878 Mm.259724 NR_028380 ENSMUSG00000086370 Ftx B230206F22Rik|BB219131|NCRNA00182|Thcytx Ftx transcript, Xist regulator (non-protein coding) ncRNA common_peak1_159_970_0.447643675770653_10.1471493233045_12.2108238456868 chr1 85836865 85839013 + 12.2108238456868 NA intron (NM_133781, intron 4 of 8) intron (NM_133781, intron 4 of 8) 44492 NM_133781 12283 Mm.26135 NM_133781 ENSMUSG00000036707 Cab39 AA408805|AA960512|C78372|MO25|MO25alpha calcium binding protein 39 protein-coding common_peak1_102_508_0.600026037701044_9.29153486492622_12.2099849957074 chr15 79108696 79109929 + 12.2099849957074 NA exon (NM_177461, exon 1 of 16) exon (NM_177461, exon 1 of 16) 329 NM_177461 27008 Mm.196480 NM_177461 ENSMUSG00000033039 Micall1 AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668 microtubule associated monooxygenase, calponin and LIM domain containing -like 1 protein-coding common_peak2_391_3342_0.249785530852348_11.8318204050436_12.2071892875606 chr14 64728782 64735732 + 12.2071892875606 NA intron (NM_001081177, intron 10 of 39) intron (NM_001081177, intron 10 of 39) 79726 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak2_502_4655_0.213056097017372_12.291403391417_12.2053536990283 chr14 56292268 56300645 + 12.2053536990283 NA Intergenic Intergenic -34196 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak2_627_6232_0.184989259367478_12.6982056270946_12.2005395138351 chr4 133750313 133758176 + 12.2005395138351 NA promoter-TSS (NM_001080819) promoter-TSS (NM_001080819) -633 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding common_peak1_104_1112_-0.494657646665141_9.87290905400939_12.1956123177464 chr12 70135903 70137098 + 12.1956123177464 NA Intergenic Intergenic -17671 NM_001195033 100504285 Mm.291105 NM_001195033 ENSMUSG00000090121 Abhd12b Gm804 abhydrolase domain containing 12B protein-coding unique_peak2_10_153_-1.63360110918731_6.44998598610125_12.1947125509635 chr4 24942427 24943431 + 12.1947125509635 NA Intergenic Intergenic -30490 NM_030733 81006 Mm.160412 NM_030733 ENSMUSG00000040372 Gpr63 PSP24beta|Psp24-2 G protein-coupled receptor 63 protein-coding common_peak2_114_599_0.557747700475948_9.50769254073386_12.1924136404901 chr9 63376840 63378747 + 12.1924136404901 NA promoter-TSS (NM_011840) promoter-TSS (NM_011840) 59 NM_011840 23938 Mm.325746 NM_011840 ENSMUSG00000058444 Map2k5 AI324775|AI428457|MEK5|Mapkk5|Prkmk5 mitogen-activated protein kinase kinase 5 protein-coding common_peak2_174_1908_-0.369050086002083_10.7140763444029_12.1909140400165 chr7 27486031 27488675 + 12.1909140400165 NA intron (NM_018820, intron 1 of 1) CpG 400 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding unique_peak2_27_315_-1.01721599815918_7.79517274909751_12.1885724827093 chr6 99064233 99065963 + 12.1885724827093 NA intron (NM_001197321, intron 4 of 17) B3A|SINE|B2 -36800 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_97_471_0.6208454987352_9.19306579872944_12.188070654954 chr14 70442685 70444115 + 12.188070654954 NA promoter-TSS (NM_025945) promoter-TSS (NM_025945) 71 NM_025945 67065 Mm.20420 NM_025945 ENSMUSG00000000776 Polr3d 2810426M17Rik|44kDa|AI326118|AW489084|BN51T|RPC4|TSBN51 polymerase (RNA) III (DNA directed) polypeptide D protein-coding common_peak2_326_2619_0.28052565525811_11.4956139240539_12.1847404787843 chr19 41381489 41385690 + 12.1847404787843 NA intron (NM_031376, intron 1 of 16) intron (NM_031376, intron 1 of 16) 1481 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak2_134_759_0.500457545386968_9.82008438102443_12.1832753520107 chr13 5848224 5851304 + 12.1832753520107 NA Intergenic Intergenic 8328 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_134_759_0.500457545386968_9.82008438102443_12.1832753520107 chr8 121107597 121109035 + 12.1832753520107 NA promoter-TSS (NM_172761) promoter-TSS (NM_172761) 63 NM_172761 234814 Mm.31690 NM_172761 ENSMUSG00000031816 Mthfsd AW049977|BC052066|C920004D05 methenyltetrahydrofolate synthetase domain containing protein-coding common_peak1_46_142_1.04325975064763_7.6815012121022_12.1831897607015 chr7 78913797 78914572 + 12.1831897607015 NA promoter-TSS (NM_001113527) promoter-TSS (NM_001113527) -51 NM_001113527 57444 Mm.322843 NM_020583 ENSMUSG00000039236 Isg20 1600023I01Rik|2010107M23Rik|20kDa|DnaQL|HEM45 interferon-stimulated protein protein-coding common_peak1_26_305_-1.03518027585306_7.73979770476612_12.1814958241846 chr5 149678002 149678507 + 12.1814958241846 NA promoter-TSS (NM_001081204) promoter-TSS (NM_001081204) -3 NM_001081204 381694 Mm.45060 NM_001081204 ENSMUSG00000051950 B3glct B3galtl|Gm1057 beta-3-glucosyltransferase protein-coding unique_peak2_26_305_-1.03518027585306_7.73979770476612_12.1814958241846 chr18 60751213 60752989 + 12.1814958241846 NA Intergenic MIR|SINE|MIR -22495 NM_020600 20044 Mm.43778 NM_020600 ENSMUSG00000024608 Rps14 2600014J02Rik|AL023078 ribosomal protein S14 protein-coding common_peak1_78_337_0.721219654831133_8.76148926369775_12.1787246211209 chr5 38038371 38039882 + 12.1787246211209 NA promoter-TSS (NM_026959) promoter-TSS (NM_026959) -104 NM_001289536 71116 Mm.18959 NM_026959 ENSMUSG00000029125 Stx18 1810035L21Rik|4933425D03Rik|AU041562 syntaxin 18 protein-coding common_peak1_73_779_-0.600934351351844_9.30686313807369_12.1786444093417 chr11 53809914 53811363 + 12.1786444093417 NA intron (NR_033332, intron 3 of 3) RSINE1|SINE|B4 40165 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak1_154_1675_-0.396018642086725_10.512797112656_12.1782432741872 chr9 61372306 61373486 + 12.1782432741872 NA 5' UTR (NM_001083928, exon 1 of 20) 5' UTR (NM_001083928, exon 1 of 20) 530 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak1_37_96_1.22706367239612_7.21344467838519_12.1772118368211 chr10 127147835 127148666 + 12.1772118368211 NA Intergenic L1M4a2|LINE|L1 -16906 NR_045166 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak2_208_2314_-0.333050861622857_11.0102710473362_12.1769207540396 chr18 31909896 31911901 + 12.1769207540396 NA exon (NM_026006, exon 1 of 1) exon (NM_026006, exon 1 of 1) 1005 NM_026006 67158 Mm.31537 NM_026006 ENSMUSG00000044982 Sft2d3 2610206C24Rik|AI847965|AW046173 SFT2 domain containing 3 protein-coding common_peak1_462_4172_0.224425385958178_12.1390818982425_12.1750634167387 chr13 32964138 32968656 + 12.1750634167387 NA intron (NM_011454, intron 1 of 6) intron (NM_011454, intron 1 of 6) 884 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak1_16_210_-1.31756292773301_7.06231772484068_12.1740445828182 chr10 98745331 98745655 + 12.1740445828182 NA Intergenic Intergenic -169659 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_74_790_-0.597384176183125_9.32884179638123_12.1736143440182 chr10 80675452 80676324 + 12.1736143440182 NA 5' UTR (NM_021462, exon 2 of 14) 5' UTR (NM_021462, exon 2 of 14) 405 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak1_74_790_-0.597384176183125_9.32884179638123_12.1736143440182-2 chr2 180119229 180120007 + 12.1736143440182 NA intron (NM_144500, intron 1 of 13) CpG 252 NM_144500 228983 Mm.253578 NM_144500 ENSMUSG00000039050 Osbpl2 C130070J12Rik|ORP-2|Orp2|mKIAA0772 oxysterol binding protein-like 2 protein-coding common_peak1_267_1998_0.318705565777808_11.1244155396335_12.1724973580056 chr18 84588521 84590441 + 12.1724973580056 NA promoter-TSS (NM_001033341) promoter-TSS (NM_001033341) 23 NM_001033341 240476 Mm.329575 NM_001033341 ENSMUSG00000048410 Zfp407 6430585N13Rik|Gm333|Gm334|Gm948|ZNF407 zinc finger protein 407 protein-coding unique_peak1_32_73_1.36786658203193_6.89338665664491_12.1694540904289 chr8 46935815 46936525 + 12.1694540904289 NA Intergenic Intergenic -50755 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak2_57_613_-0.686819219671253_8.91868523553455_12.168466206931 chr5 125404501 125406911 + 12.168466206931 NA Intergenic Intergenic -15689 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding unique_peak2_31_354_-0.948809640080521_7.99727039435178_12.1679375452522 chrX 75738892 75741823 + 12.1679375452522 NA intron (NR_029443, intron 6 of 8) intron (NR_029443, intron 6 of 8) 24342 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA common_peak1_21_257_-1.1514295127293_7.4355124990586_12.1677635601537 chr1 97623637 97624296 + 12.1677635601537 NA Intergenic polypyrimidine|Low_complexity|Low_complexity 38052 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak2_236_1687_0.345134418559416_10.8936663979869_12.1671639735096 chr2 166099120 166103798 + 12.1671639735096 NA intron (NM_001252579, intron 3 of 20) intron (NM_001252579, intron 3 of 20) 53826 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak1_109_1166_-0.480685516135077_9.94824608763981_12.1669646142977 chr8 122560806 122562031 + 12.1669646142977 NA Intergenic Intergenic -6597 NM_026014 67177 Mm.21873 NM_026014 ENSMUSG00000006585 Cdt1 2610318F11Rik|AW545653|C76791|Ris2 chromatin licensing and DNA replication factor 1 protein-coding common_peak2_62_234_0.845092213386783_8.29906305325839_12.1661534606026 chr8 91064799 91066007 + 12.1661534606026 NA Intergenic Intergenic -4654 NM_001282001 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 retinoblastoma-like 2 protein-coding common_peak1_55_192_0.920720023936201_8.05281704923618_12.1641253064293 chr14 30825484 30826379 + 12.1641253064293 NA intron (NM_028839, intron 1 of 7) CpG 337 NM_028839 69179 Mm.143025 NM_028839 ENSMUSG00000006526 Tmem110 1810038N08Rik|2310014H19Rik|AW554125|STIMATE transmembrane protein 110 protein-coding common_peak1_40_442_-0.829719623489592_8.37630307681022_12.1637067430406 chr9 46282240 46282929 + 12.1637067430406 NA promoter-TSS (NM_146000) promoter-TSS (NM_146000) -428 NM_146000 215051 Mm.32648 NM_146000 ENSMUSG00000032077 Bud13 AV305342|D030060M11Rik BUD13 homolog protein-coding common_peak2_63_240_0.836588549267918_8.33118361086392_12.1631431909852 chr8 11106405 11108107 + 12.1631431909852 NA Intergenic Intergenic -98826 NM_001081212 384783 Mm.407207 NM_001081212 ENSMUSG00000038894 Irs2 Irs-2 insulin receptor substrate 2 protein-coding common_peak2_47_147_1.0309344136495_7.7249205724537_12.1626359193408 chr2 143914971 143916123 + 12.1626359193408 NA 5' UTR (NM_019771, exon 1 of 4) 5' UTR (NM_019771, exon 1 of 4) 216 NM_019771 56431 Mm.28919 NM_019771 ENSMUSG00000015932 Dstn 2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p destrin protein-coding common_peak2_48_522_-0.753790899336257_8.65377168657881_12.1615065700194 chr6 87009224 87010443 + 12.1615065700194 NA promoter-TSS (NM_020045) promoter-TSS (NM_020045) -3 NM_001170591 56748 Mm.23809 NM_020045 ENSMUSG00000029993 Nfu1 0610006G17Rik|CGI-33|Hirip5 NFU1 iron-sulfur cluster scaffold protein-coding common_peak1_157_1709_-0.391069207473588_10.5442460060365_12.1581875694096 chr13 55211800 55213229 + 12.1581875694096 NA intron (NM_008739, intron 1 of 22) CpG 2732 NM_008739 18193 Mm.12964 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak2_20_248_-1.18252728826958_7.36873828793329_12.1568571171686 chr16 49806686 49807976 + 12.1568571171686 NA Intergenic Intergenic -48323 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_39_106_1.17627955241599_7.32960676260914_12.1556318786492 chr18 32938781 32939871 + 12.1556318786492 NA 5' UTR (NM_009793, exon 1 of 11) 5' UTR (NM_009793, exon 1 of 11) 285 NM_009793 12326 Mm.222329 NM_009793 ENSMUSG00000038128 Camk4 A430110E23Rik|AI666733|CaMKIV|CaMKIV/Gr|D18Bwg0362e calcium/calmodulin-dependent protein kinase IV protein-coding unique_peak2_45_492_-0.780370721098047_8.55525847582889_12.1546520151747 chr6 97352012 97354263 + 12.1546520151747 NA intron (NM_145148, intron 8 of 23) intron (NM_145148, intron 8 of 23) -100357 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding unique_peak1_28_56_1.51577330034783_6.59077666433866_12.1544469262823-2 chr14 79553121 79553732 + 12.1544469262823 NA intron (NM_001286411, intron 2 of 8) intron (NM_001286411, intron 2 of 8) -34265 NM_026474 67955 Mm.18972 NM_026474 ENSMUSG00000022024 Sugt1 2410174K12Rik|SGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) protein-coding unique_peak1_28_56_1.51577330034783_6.59077666433866_12.1544469262823 chr10 120744994 120745564 + 12.1544469262823 NA Intergenic Intergenic -20453 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak1_28_56_1.51577330034783_6.59077666433866_12.1544469262823-3 chr4 130904457 130905311 + 12.1544469262823 NA Intergenic Intergenic -8450 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding common_peak2_98_1046_-0.510591263116645_9.77675009537249_12.1543479557546 chr17 3556764 3558554 + 12.1543479557546 NA promoter-TSS (NM_146074) promoter-TSS (NM_146074) 54 NM_146074 224481 Mm.226554 NM_146074 ENSMUSG00000036983 Tfb1m AI429207 transcription factor B1, mitochondrial protein-coding common_peak2_440_3912_0.231085874316458_12.049602332059_12.1543287736923 chr4 6441544 6448049 + 12.1543287736923 NA intron (NM_010945, intron 1 of 30) intron (NM_010945, intron 1 of 30) 9475 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding common_peak2_410_3562_0.241595304554846_11.9196744204107_12.1511971589551 chr13 32989344 32997488 + 12.1511971589551 NA Intergenic MTD|LTR|ERVL-MaLR -11125 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding common_peak2_270_2029_0.316203521274868_11.14536577271_12.1450026084684 chr4 3677379 3679626 + 12.1450026084684 NA intron (NM_010747, intron 1 of 12) CpG 381 NM_010747 17096 Mm.317331 NM_010747 ENSMUSG00000042228 Lyn AA407514|Hck-2|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding common_peak2_103_516_0.59462539669871_9.31133316866429_12.1414888886085 chr13 67552316 67553647 + 12.1414888886085 NA promoter-TSS (NR_131099) promoter-TSS (NR_131099) 171 NM_001035231 212276 Mm.422831 NM_183145 ENSMUSG00000095432 Zfp748 KRAB-O|Rslcan20/21|Zfp208|mszf54 zinc finger protein 748 protein-coding common_peak2_73_304_0.753730529947518_8.62953069742401_12.1399766262913 chr17 26531890 26533505 + 12.1399766262913 NA Intergenic PB1D7|SINE|Alu -24225 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak2_33_373_-0.91674588772711_8.08852151602408_12.1370416478418 chr13 38049113 38050985 + 12.1370416478418 NA intron (NM_024242, intron 8 of 16) intron (NM_024242, intron 8 of 16) 13060 NM_024242 71340 Mm.297130 NM_024242 ENSMUSG00000021428 Riok1 3110046C13Rik|5430416A05Rik|Ad034 RIO kinase 1 (yeast) protein-coding common_peak1_33_373_-0.91674588772711_8.08852151602408_12.1370416478418 chr1 133367506 133368189 + 12.1370416478418 NA intron (NM_175443, intron 2 of 7) intron (NM_175443, intron 2 of 7) 4275 NM_175443 214253 Mm.52111 NM_175443 ENSMUSG00000070644 Etnk2 4933417N20Rik|AI197444|EKI 2|Eki2|Tuc1 ethanolamine kinase 2 protein-coding common_peak2_66_259_0.808175887121269_8.42645575658909_12.1357480675884 chr19 24166328 24167445 + 12.1357480675884 NA intron (NM_011597, intron 1 of 22) intron (NM_011597, intron 1 of 22) 7254 NM_001198985 21873 Mm.104744 NM_011597 ENSMUSG00000024812 Tjp2 ZO-2 tight junction protein 2 protein-coding common_peak2_58_624_-0.682185974507624_8.94661939229564_12.1333399338288 chrX 101273234 101275186 + 12.1333399338288 NA 5' UTR (NM_021521, exon 1 of 45) 5' UTR (NM_021521, exon 1 of 45) 119 NM_021521 59024 Mm.20873 NM_021521 ENSMUSG00000079487 Med12 230kDa|Mopa|OPA-1|Tnrc11|Trap230 mediator complex subunit 12 protein-coding common_peak1_65_253_0.815247572075071_8.3963084728097_12.1303536479287 chr14 47374558 47375526 + 12.1303536479287 NA intron (NM_001145953, intron 1 of 5) ORR1A2|LTR|ERVL-MaLR 1182 NM_001145953 16854 Mm.248615 NM_010705 ENSMUSG00000050335 Lgals3 GBP|L-34|Mac-2|gal3 lectin, galactose binding, soluble 3 protein-coding common_peak2_17_219_-1.27667435165199_7.14302253769866_12.1282314140791 chr7 19300782 19301497 + 12.1282314140791 NA Intergenic Intergenic 8906 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding common_peak1_124_1332_-0.446340286074269_10.1572909220518_12.1276738901455 chr16 91442638 91444428 + 12.1276738901455 NA Intergenic Intergenic -21571 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak1_64_247_0.822718209946022_8.36555541535989_12.1273354877522 chr11 118399726 118401030 + 12.1273354877522 NA intron (NM_011150, intron 1 of 5) intron (NM_011150, intron 1 of 5) 1553 NM_011150 19039 Mm.3152 NM_011150 ENSMUSG00000033880 Lgals3bp 90K|CyCAP|MAC-2BP|Ppicap|Tango10b lectin, galactoside-binding, soluble, 3 binding protein protein-coding common_peak1_166_1033_0.432726135373025_10.2303835380014_12.1251320604302 chr1 93634801 93636631 + 12.1251320604302 NA promoter-TSS (NM_021537) promoter-TSS (NM_021537) 11 NM_021537 59041 Mm.28761 NM_021537 ENSMUSG00000026277 Stk25 1500019J11Rik|AU018434|C86992|Ste20-like|Ysk1 serine/threonine kinase 25 (yeast) protein-coding common_peak2_148_1604_-0.403432579902045_10.4466412920586_12.1239310461533 chr1 86358455 86360570 + 12.1239310461533 NA promoter-TSS (NM_010880) promoter-TSS (NM_010880) -57 NM_010880 17975 Mm.154378 NM_010880 ENSMUSG00000026234 Ncl B530004O11Rik|C23|D0Nds28|D1Nds28|Nucl nucleolin protein-coding common_peak2_100_1067_-0.503847738082097_9.80877206264651_12.1237485763106 chr17 78993930 78996429 + 12.1237485763106 NA intron (NM_029239, intron 2 of 18) intron (NM_029239, intron 2 of 18) 13326 NM_001171005 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding common_peak1_60_644_-0.668635899263643_8.9988374006788_12.1178296314689 chr15 89122529 89123390 + 12.1178296314689 NA TTS (NM_199198) TTS (NM_199198) 191 NM_001163319 328580 Mm.380934 NM_001163319 ENSMUSG00000051786 Tubgcp6 AI843275|D430023H11|GCP-6|mKIAA1669 tubulin, gamma complex associated protein 6 protein-coding common_peak2_60_644_-0.668635899263643_8.9988374006788_12.1178296314689 chr2 34975989 34978051 + 12.1178296314689 NA Intergenic B3|SINE|B2 -15248 NM_009421 22029 Mm.239514 NM_009421 ENSMUSG00000026875 Traf1 4732496E14Rik TNF receptor-associated factor 1 protein-coding common_peak2_85_905_-0.55102775860593_9.54785336074327_12.1156023967117 chr17 72995690 72998072 + 12.1156023967117 NA Intergenic Intergenic 78576 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_120_647_0.536716841750824_9.60820842376004_12.1153023308241 chr7 125602354 125605047 + 12.1153023308241 NA 5' UTR (NM_021887, exon 1 of 9) 5' UTR (NM_021887, exon 1 of 9) 271 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak2_232_1649_0.347861251740671_10.8621809350035_12.1108776985763 chr9 92456665 92458613 + 12.1108776985763 NA 5' UTR (NM_178711, exon 1 of 9) 5' UTR (NM_178711, exon 1 of 9) 261 NM_178711 235527 Mm.55289 NM_178711 ENSMUSG00000032377 Plscr4 AV245873 phospholipid scramblase 4 protein-coding common_peak2_240_1728_0.340129341612368_10.9257868244485_12.1099348415795 chr14 70055364 70058274 + 12.1099348415795 NA intron (NM_028560, intron 6 of 6) intron (NM_028560, intron 6 of 6) -20626 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding common_peak1_106_1132_-0.486961726464742_9.90245128258814_12.1064002217642 chr13 104228062 104228891 + 12.1064002217642 NA promoter-TSS (NR_075088) promoter-TSS (NR_075088) -135 NM_181061 60411 Mm.281498 NM_021790 ENSMUSG00000021714 Cenpk B130045K24Rik|BB232189|C530004N04Rik|Cenp-K|Solt|Solzt centromere protein K protein-coding common_peak2_52_175_0.956310146805815_7.9375866920402_12.1061634751805 chr5 150195618 150196499 + 12.1061634751805 NA Intergenic Intergenic -63872 NM_172887 320365 Mm.216590 NM_172887 ENSMUSG00000056602 Fry 13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143 FRY microtubule binding protein protein-coding common_peak2_135_1456_-0.425411967531272_10.2960791782989_12.105622981625 chr9 106159398 106160938 + 12.105622981625 NA Intergenic Intergenic -2030 NM_174846 235582 Mm.335420 NM_174846 ENSMUSG00000020258 Glyctk 6230410P16Rik|C430006L12 glycerate kinase protein-coding common_peak2_132_744_0.502803697312837_9.79249846400594_12.1038746678824 chr9 14379940 14381643 + 12.1038746678824 NA exon (NM_028013, exon 1 of 2) exon (NM_028013, exon 1 of 2) 451 NM_028013 71946 Mm.41423 NM_028013 ENSMUSG00000037419 Endod1 2210414F18Rik|2310067E08Rik|C85344 endonuclease domain containing 1 protein-coding common_peak1_132_744_0.502803697312837_9.79249846400594_12.1038746678824 chr9 14379917 14381640 + 12.1038746678824 NA exon (NM_028013, exon 1 of 2) exon (NM_028013, exon 1 of 2) 464 NM_028013 71946 Mm.41423 NM_028013 ENSMUSG00000037419 Endod1 2210414F18Rik|2310067E08Rik|C85344 endonuclease domain containing 1 protein-coding unique_peak2_11_161_-1.55268684597888_6.56350657989518_12.100412773794-2 chrX 37143989 37144920 + 12.100412773794 NA intron (NM_025937, intron 8 of 8) (GAA)n|Simple_repeat|Simple_repeat 17691 NM_025937 67050 Mm.55422 NM_025937 ENSMUSG00000016409 Nkap 2610020O08Rik|AA987160|AI849147|AL024236 NFKB activating protein protein-coding unique_peak2_11_161_-1.55268684597888_6.56350657989518_12.100412773794 chr4 42153033 42154404 + 12.100412773794 NA intron (NR_033123, intron 1 of 4).2 intron (NR_033123, intron 1 of 4).2 265 NR_033123 108816 Mm.440578 NM_178649 4933409K07Rik AV071682|b1402 RIKEN cDNA 4933409K07 gene pseudo common_peak1_18_228_-1.23883958470005_7.21978399574692_12.099689608253 chr14 64667151 64667554 + 12.099689608253 NA intron (NM_001081177, intron 1 of 39) intron (NM_001081177, intron 1 of 39) 14821 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding unique_peak1_26_48_1.60749772272439_6.4184587054774_12.0984259750914 chr1 195006909 195007510 + 12.0984259750914 NA Intergenic Intergenic -10190 NR_015566 320977 Mm.99905 NR_015566 ENSMUSG00000096929 A330023F24Rik C030002C11Rik RIKEN cDNA A330023F24 gene ncRNA common_peak2_101_501_0.602739534363041_9.27291332113229_12.0978715881552 chr10 39504181 39507609 + 12.0978715881552 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) -107039 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak1_50_542_-0.737137610676905_8.71623958246591_12.0964957047584 chr3 103773298 103774007 + 12.0964957047584 NA intron (NM_010432, intron 2 of 15) intron (NM_010432, intron 2 of 15) 17623 NM_001301306 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding common_peak1_74_789_-0.595559134774799_9.32792927567707_12.0933315446148 chr6 37464227 37465054 + 12.0933315446148 NA Intergenic Lx8|LINE|L1 -22492 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak1_546_5203_0.200924734947028_12.4458676141913_12.0918738304758 chr18 35917872 35921165 + 12.0918738304758 NA Intergenic Intergenic -45312 NM_028707 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding unique_peak2_39_432_-0.840476675909592_8.33798487677193_12.0907739996884 chr11 116397133 116399130 + 12.0907739996884 NA intron (NM_027258, intron 1 of 18) intron (NM_027258, intron 1 of 18) 14901 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak2_65_695_-0.639011237001492_9.12343787734798_12.0894964090101 chr3 116594099 116595788 + 12.0894964090101 NA promoter-TSS (NM_001289568) promoter-TSS (NM_001289568) -15 NM_001289568 72776 Mm.440836 NM_028349 ENSMUSG00000027959 Sass6 2810453L12Rik SAS-6 centriolar assembly protein protein-coding common_peak1_19_237_-1.20368353567717_7.29297599546936_12.0859888760782 chr17 34197328 34197612 + 12.0859888760782 NA promoter-TSS (NM_010724) promoter-TSS (NM_010724) -725 NM_010724 16913 Mm.180191 NM_010724 ENSMUSG00000024338 Psmb8 Lmp-7|Lmp7 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) protein-coding common_peak2_251_1838_0.330128017912555_11.0097697733682_12.0828149825824 chr16 27386938 27390011 + 12.0828149825824 NA promoter-TSS (NM_026202) promoter-TSS (NM_026202) -482 NM_001025615 67501 Mm.258985 NM_026202 ENSMUSG00000038127 Ccdc50 C3orf6 coiled-coil domain containing 50 protein-coding common_peak1_340_2774_0.271791561737327_11.5741678369935_12.0826832758997 chr6 50394220 50396495 + 12.0826832758997 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -12520 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_196_2167_-0.343042424728571_10.9106278289896_12.0802529730902 chr6 120081502 120084825 + 12.0802529730902 NA Intergenic Intergenic -10217 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak1_45_137_1.0565486585017_7.63679878602902_12.077447024957 chr17 32924784 32925251 + 12.077447024957 NA intron (NM_130882, intron 12 of 12) intron (NM_130882, intron 12 of 12) -7675 NM_001204336 64385 Mm.486449 NM_022434 ENSMUSG00000024292 Cyp4f14 1300014O15Rik|cyp4f-14 cytochrome P450, family 4, subfamily f, polypeptide 14 protein-coding common_peak2_212_2360_-0.327888264228342_11.0412381941145_12.0739495446941 chr8 26118041 26120423 + 12.0739495446941 NA promoter-TSS (NM_029965) promoter-TSS (NM_029965) -8 NM_207659 320191 Mm.334464 NM_207659 ENSMUSG00000037234 Hook3 5830454D03Rik|AI317159|E330005F07Rik hook microtubule tethering protein 3 protein-coding common_peak1_34_382_-0.899754867401423_8.13132314822425_12.0728181667735 chr8 70808433 70809047 + 12.0728181667735 NA intron (NM_008353, intron 1 of 15) intron (NM_008353, intron 1 of 15) 291 NM_008353 16161 Mm.731 NM_008353 ENSMUSG00000000791 Il12rb1 CD212|IL-12R[b] interleukin 12 receptor, beta 1 protein-coding common_peak2_116_616_0.547951286611728_9.54310232245528_12.0720297424425 chr5 3543559 3544639 + 12.0720297424425 NA intron (NM_001042501, intron 1 of 10) CpG 266 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak2_53_181_0.941025237827255_7.97830725911232_12.066612869232 chrX 11664627 11665844 + 12.066612869232 NA Intergenic CpG 337413 NM_001114529 236663 Mm.473680 NM_001114529 ENSMUSG00000069038 H2al1j EG236663|Gm4906 H2A histone family member L1J protein-coding common_peak1_92_436_0.639327251386991_9.09115309519409_12.0654333159058 chr6 15720400 15721620 + 12.0654333159058 NA intron (NM_175088, intron 1 of 4) CpG 349 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding common_peak2_512_4782_0.209067675870434_12.3282339139215_12.0628700276673 chr7 4335052 4347857 + 12.0628700276673 NA intron (NM_010746, intron 5 of 6) (GA)n|Simple_repeat|Simple_repeat 3730 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak1_27_314_-1.01264326836935_7.7928863842026_12.0624815662333 chr4 145209848 145210456 + 12.0624815662333 NA Intergenic T-rich|Low_complexity|Low_complexity -15147 NM_001276465 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding common_peak2_236_1689_0.343426076097055_10.8945205692181_12.0571178076553 chr6 140622702 140625469 + 12.0571178076553 NA promoter-TSS (NM_001309437) promoter-TSS (NM_001309437) 583 NM_001005605 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak1_40_441_-0.826459294326006_8.37467291222843_12.0569097772601 chrX 167105757 167106535 + 12.0569097772601 NA Intergenic Intergenic -35776 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak1_58_211_0.877605950478626_8.16672342980251_12.0552945242182 chr4 135312960 135313900 + 12.0552945242182 NA Intergenic MIRb|SINE|MIR 39784 NM_016799 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak1_45_491_-0.777441390059375_8.55379381030955_12.0533571592968 chr13 21831615 21832330 + 12.0533571592968 NA exon (NM_175657, exon 1 of 1) exon (NM_175657, exon 1 of 1) 186 NM_175657 319161 Mm.261664 NM_175657 ENSMUSG00000069305 Hist1h4n - histone cluster 1, H4n protein-coding common_peak1_92_980_-0.527292605331649_9.67446302355341_12.052630683022 chr5 23721526 23723086 + 12.052630683022 NA Intergenic ERVB3_1-I_MM-int|LTR|ERVK -9639 NR_015554 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak1_198_1325_0.38411673373483_10.56492342698_12.0483226430298 chr11 97361710 97363838 + 12.0483226430298 NA exon (NM_138657, exon 1 of 10) exon (NM_138657, exon 1 of 10) 223 NM_138657 192157 Mm.34339 NM_138657 ENSMUSG00000038485 Socs7 2310063P06Rik|C85125|Nap4 suppressor of cytokine signaling 7 protein-coding unique_peak1_21_30_1.90560143230708_5.90699702654041_12.0466568099898-2 chr2 3748599 3748931 + 12.0466568099898 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 35307 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding unique_peak1_21_30_1.90560143230708_5.90699702654041_12.0466568099898 chr18 34415667 34416109 + 12.0466568099898 NA intron (NM_001163004, intron 4 of 14) intron (NM_001163004, intron 4 of 14) 6465 NM_016927 53871 Mm.445792 NM_016927 ENSMUSG00000014503 Pkd2l2 TRPP5 polycystic kidney disease 2-like 2 protein-coding common_peak1_21_30_1.90560143230708_5.90699702654041_12.0466568099898 chr19 10691135 10691497 + 12.0466568099898 NA intron (NM_181403, intron 1 of 4) MTE2b|LTR|ERVL-MaLR 2501 NM_181403 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding common_peak1_16_15_2.40353626097417_5.20176813048709_12.0460071336122 chr12 76531964 76532420 + 12.0460071336122 NA TTS (NR_039597) TTS (NR_039597) 1020 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA unique_peak1_16_15_2.40353626097417_5.20176813048709_12.0460071336122 chr8 69966304 69966674 + 12.0460071336122 NA intron (NM_001286450, intron 1 of 12) RSINE1|SINE|B4 7894 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak2_164_1788_-0.379512137512707_10.6151816032956_12.0444880843408 chr7 19307939 19310961 + 12.0444880843408 NA 5' UTR (NM_008036, exon 1 of 4) 5' UTR (NM_008036, exon 1 of 4) 595 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding common_peak2_675_6867_0.175364146899986_12.8333563974521_12.0443040396602 chr8 72347818 72357028 + 12.0443040396602 NA intron (NM_007944, intron 22 of 23) intron (NM_007944, intron 22 of 23) 33361 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_106_1131_-0.485687823476109_9.90181433109383_12.0394054610696 chr6 130160365 130162393 + 12.0394054610696 NA promoter-TSS (NR_104105) promoter-TSS (NR_104105) -631 NR_104105 654449 Mm.439698 NM_008461 ENSMUSG00000072721 Klra14-ps EG654449|Gm15858|Klra14|Klra29|Klra31|Ly49N|OTTMUSG00000026959 killer cell lectin-like receptor subfamily A, member 14, pseudogene pseudo common_peak1_137_1478_-0.421198705665917_10.3198069842661_12.038298402313 chrX 52912231 52913991 + 12.038298402313 NA intron (NM_001290546, intron 1 of 8) intron (NM_001290546, intron 1 of 8) 897 NM_001290546 70998 Mm.26870 NM_027642 ENSMUSG00000025626 Phf6 2700007B13Rik|4931428F02Rik|mKIAA1823 PHD finger protein 6 protein-coding common_peak2_99_487_0.608502476946208_9.23498857603599_12.0381596572346 chr15 101253426 101255327 + 12.0381596572346 NA Intergenic CpG -12470 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding unique_peak2_6_114_-2.01214992329916_5.83941508929479_12.0319610095371 chr9 98985718 98986281 + 12.0319610095371 NA promoter-TSS (NM_001122851) promoter-TSS (NM_001122851) -374 NM_001122851 23873 Mm.74605 NM_011810 ENSMUSG00000032463 Faim - Fas apoptotic inhibitory molecule protein-coding common_peak2_95_1012_-0.51741836833633_9.72570927463297_12.0299189549098 chr5 138170413 138173003 + 12.0299189549098 NA promoter-TSS (NM_021392) promoter-TSS (NM_021392) 154 NM_008568 17220 Mm.378965 NM_008568 ENSMUSG00000029730 Mcm7 AI747533|Mcmd7|mCDC47 minichromosome maintenance complex component 7 protein-coding common_peak1_21_256_-1.14582680649993_7.43271114594392_12.0287726167551 chrX 142227928 142228531 + 12.0287726167551 NA promoter-TSS (NM_172782) promoter-TSS (NM_172782) 52 NM_172782 237082 Mm.41899 NM_172782 ENSMUSG00000042271 Nxt2 6330587F24Rik|AI787442|P15-2 nuclear transport factor 2-like export factor 2 protein-coding common_peak1_272_2052_0.312961646764728_11.159998735491_12.0261464035763 chr19 5609313 5610826 + 12.0261464035763 NA promoter-TSS (NM_001199249) promoter-TSS (NM_001199249) 25 NM_001199249 81601 Mm.228930 NM_178637 ENSMUSG00000024926 Kat5 AI839539|CPLA2|Htatip|Htatip1|PLIP|Tip55|Tip60 K(lysine) acetyltransferase 5 protein-coding unique_peak1_14_10_2.72261250277405_4.82073787002432_12.0256067573535 chr1 52492452 52492762 + 12.0256067573535 NA intron (NM_008667, intron 1 of 7) intron (NM_008667, intron 1 of 7) 7841 NM_008667 17936 Mm.25903 NM_008667 ENSMUSG00000002881 Nab1 - Ngfi-A binding protein 1 protein-coding unique_peak1_14_10_2.72261250277405_4.82073787002432_12.0256067573535-4 chr7 90341080 90341431 + 12.0256067573535 NA intron (NM_001289583, intron 1 of 19) intron (NM_001289583, intron 1 of 19) 38900 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak2_2_73_-2.87551483109592_4.77169595008099_12.0256067573535 chr1 36296158 36296725 + 12.0256067573535 NA Intergenic Intergenic -11292 NM_001290727 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding unique_peak1_14_10_2.72261250277405_4.82073787002432_12.0256067573535-5 chr8 25196596 25196984 + 12.0256067573535 NA intron (NM_177089, intron 2 of 12) intron (NM_177089, intron 2 of 12) 4752 NM_199323 320165 Mm.308452 NM_177089 ENSMUSG00000065954 Tacc1 4833447E04Rik|AA960202|B230378H13Rik transforming, acidic coiled-coil containing protein 1 protein-coding unique_peak1_14_10_2.72261250277405_4.82073787002432_12.0256067573535-3 chr5 112244973 112245390 + 12.0256067573535 NA Intergenic RMER13A1|LTR|ERVK 7337 NM_001312884 12959 Mm.40324 NM_021351 ENSMUSG00000066975 Cryba4 - crystallin, beta A4 protein-coding unique_peak1_14_10_2.72261250277405_4.82073787002432_12.0256067573535-2 chr1 97657136 97657548 + 12.0256067573535 NA intron (NM_133825, intron 1 of 2) MTC|LTR|ERVL-MaLR 4676 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding unique_peak1_14_10_2.72261250277405_4.82073787002432_12.0256067573535-6 chr9 25433275 25433710 + 12.0256067573535 NA Intergenic Intergenic -48105 NM_026189 67484 Mm.112977 NM_026189 ENSMUSG00000036611 Eepd1 2310005P05Rik|AI481005 endonuclease/exonuclease/phosphatase family domain containing 1 protein-coding unique_peak1_23_37_1.76584795464851_6.13085149076784_12.0236030803176-2 chr19 7056829 7057456 + 12.0236030803176 NA exon (NM_134147, exon 1 of 11) exon (NM_134147, exon 1 of 11) 374 NM_134147 107227 Mm.439977 NM_134147 ENSMUSG00000036278 Macrod1 AI604841|AW743046|D930010J01Rik|Lrp16 MACRO domain containing 1 protein-coding unique_peak1_23_37_1.76584795464851_6.13085149076784_12.0236030803176 chr1 164440014 164440551 + 12.0236030803176 NA intron (NM_009721, intron 4 of 5) intron (NM_009721, intron 4 of 5) 18073 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding common_peak1_23_275_-1.09474898868607_7.56114996243513_12.0216401711532 chr1 21354628 21355155 + 12.0216401711532 NA Intergenic Intergenic 5214 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak2_132_745_0.500868492407124_9.7934660664588_12.0213762128624 chr5 34369026 34370872 + 12.0213762128624 NA promoter-TSS (NM_001243123) promoter-TSS (NM_001243123) 16 NM_001243123 231128 Mm.286885 NM_001030306 ENSMUSG00000037210 Fam193a - family with sequence similarity 193, member A protein-coding common_peak1_188_1232_0.397786591702227_10.466850380254_12.0213660371513 chr12 55446194 55448266 + 12.0213660371513 NA intron (NR_035430, intron 1 of 3) intron (NR_035430, intron 1 of 3) 45417 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak2_102_1088_-0.497240354940168_9.84016806124682_12.0155396985637 chr19 5770396 5772171 + 12.0155396985637 NA exon (NM_023912, exon 1 of 17) exon (NM_023912, exon 1 of 17) 118 NM_023912 78891 Mm.276063 NM_023912 ENSMUSG00000024941 Scyl1 2810011O19Rik|C85140|Ntkl|mdf|mfd|p105 SCY1-like 1 (S. cerevisiae) protein-coding unique_peak2_20_247_-1.17672166658838_7.36583547709269_12.0155281181946 chr2 18693754 18694817 + 12.0155281181946 NA Intergenic CpG -4737 NM_001001334 381350 Mm.330024 NM_001001334 ENSMUSG00000037708 Spag6 Spag6l sperm associated antigen 6 protein-coding common_peak2_73_305_0.749008119705115_8.63189190254521_12.0115750670231 chr4 108317915 108319586 + 12.0115750670231 NA Intergenic B1F2|SINE|Alu -9402 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding unique_peak1_20_27_1.97011972174089_5.79241478292805_12.0114387008991-3 chr2 173217307 173217837 + 12.0114387008991 NA intron (NM_021394, intron 1 of 7) intron (NM_021394, intron 1 of 7) 1350 NM_021394 58203 Mm.116687 NM_021394 ENSMUSG00000027514 Zbp1 2010010H03Rik|Dai|Dlm1|mZaDLM Z-DNA binding protein 1 protein-coding unique_peak1_20_27_1.97011972174089_5.79241478292805_12.0114387008991-2 chr2 45085273 45085836 + 12.0114387008991 NA intron (NM_001289521, intron 1 of 8) intron (NM_001289521, intron 1 of 8) 24723 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding unique_peak1_20_27_1.97011972174089_5.79241478292805_12.0114387008991-4 chr5 93115705 93116120 + 12.0114387008991 NA intron (NM_001310669, intron 1 of 10) intron (NM_001310669, intron 1 of 10) 22496 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_20_27_1.97011972174089_5.79241478292805_12.0114387008991 chr4 43904636 43905008 + 12.0114387008991 NA intron (NM_016678, intron 6 of 20) intron (NM_016678, intron 6 of 20) 29292 NM_016678 53614 Mm.331573 NM_016678 ENSMUSG00000028476 Reck St15|mRECK reversion-inducing-cysteine-rich protein with kazal motifs protein-coding unique_peak1_20_27_1.97011972174089_5.79241478292805_12.0114387008991 chr11 21303410 21304003 + 12.0114387008991 NA intron (NM_001290628, intron 12 of 22) MLT1J|LTR|ERVL-MaLR 40969 NR_035454 100316753 NR_035454 ENSMUSG00000089555 Mir1933 mir-1933|mmu-mir-1933 microRNA 1933 ncRNA common_peak1_122_664_0.528367250830158_9.64139415580363_12.0094042573609 chr18 75386840 75388367 + 12.0094042573609 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 20238 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_170_1070_0.423890470953202_10.2766880002269_12.0093318240728 chr4 133049353 133052724 + 12.0093318240728 NA intron (NM_146155, intron 2 of 6) intron (NM_146155, intron 2 of 6) 39532 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak1_14_190_-1.3953847066244_6.87973647472355_12.0093099723154 chr18 80598933 80599326 + 12.0093099723154 NA Intergenic L1MEc|LINE|L1 -54583 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_14_190_-1.3953847066244_6.87973647472355_12.0093099723154-2 chr3 144203226 144203630 + 12.0093099723154 NA intron (NM_010723, intron 1 of 4) intron (NM_010723, intron 1 of 4) -1032 NM_001161769 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak2_136_778_0.49085803847319_9.85090853729826_12.0075418063296 chr2 157366851 157368619 + 12.0075418063296 NA intron (NM_026968, intron 1 of 2) CpG 141 NM_026968 69161 Mm.228619 NM_026968 ENSMUSG00000063019 Manbal 1810024K12Rik|AI836500 mannosidase, beta A, lysosomal-like protein-coding unique_peak2_5_104_-2.15369467194674_5.63739818169275_12.0065304138781 chr13 24417785 24418525 + 12.0065304138781 NA intron (NM_001284520, intron 3 of 14) intron (NM_001284520, intron 3 of 14) 3033 NM_001284520 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding unique_peak2_5_104_-2.15369467194674_5.63739818169275_12.0065304138781-2 chr16 70543153 70543705 + 12.0065304138781 NA intron (NM_028803, intron 14 of 15) IAPEz-int|LTR|ERVK -72996 NR_040474 52645 Mm.188475 NR_040474 D16Ertd519e - DNA segment, Chr 16, ERATO Doi 519, expressed ncRNA unique_peak2_5_104_-2.15369467194674_5.63739818169275_12.0065304138781-3 chr8 90891312 90891979 + 12.0065304138781 NA intron (NM_177224, intron 2 of 39) RLTR4_Mm|LTR|ERV1 -40604 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_148_878_0.465205646964217_10.0123221786255_12.0058047240081 chr10 93190045 93192728 + 12.0058047240081 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 28601 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak2_35_87_1.27186605442173_7.09536464584816_12.0046908849049 chr10 126905330 126906183 + 12.0046908849049 NA Intergenic Intergenic -4385 NM_001159559 68876 Mm.276769 NM_026858 ENSMUSG00000025436 Xrcc6bp1 1110068E08Rik|2410012H02Rik|Atp23 XRCC6 binding protein 1 protein-coding unique_peak1_35_87_1.27186605442173_7.09536464584816_12.0046908849049 chr19 5691832 5692567 + 12.0046908849049 NA intron (NM_022012, intron 3 of 11) intron (NM_022012, intron 3 of 11) 3068 NM_022012 26403 Mm.185026 NM_022012 ENSMUSG00000004054 Map3k11 2610017K16Rik|Mlk3|PTK1|SPRK mitogen-activated protein kinase kinase kinase 11 protein-coding common_peak1_69_279_0.778775008764923_8.51867052132743_11.9986554535717 chr4 140935142 140936108 + 11.9986554535717 NA intron (NM_008812, intron 10 of 15) intron (NM_008812, intron 10 of 15) 22277 NR_045911 100126227 Mm.404073 NR_045911 ENSMUSG00000087698 Gm13031 OTTMUSG00000010081 predicted gene 13031 ncRNA common_peak2_178_1142_0.410934897208291_10.3640771368186_11.9959906631598 chr7 80863775 80866890 + 11.9959906631598 NA intron (NM_009553, intron 2 of 2) intron (NM_009553, intron 2 of 2) 3224 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak1_97_1033_-0.510531922217893_9.75875450920599_11.9957995209686 chr9 61664259 61664973 + 11.9957995209686 NA Intergenic Intergenic 249894 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_116_1241_-0.461371492459337_10.0477637119908_11.9948758636921 chr1 171840025 171841581 + 11.9948758636921 NA intron (NM_001289470, intron 2 of 8) intron (NM_001289470, intron 2 of 8) 1106 NM_013489 12523 Mm.259115 NM_013489 ENSMUSG00000038147 Cd84 A130013D22Rik|CDw84|SLAMF5 CD84 antigen protein-coding common_peak1_41_451_-0.816092007430333_8.41213295870002_11.9931535645089 chr5 113952715 113953497 + 11.9931535645089 NA intron (NM_198109, intron 11 of 14) intron (NM_198109, intron 11 of 14) 40651 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot homolog 1 (Drosophila) protein-coding common_peak2_41_451_-0.816092007430333_8.41213295870002_11.9931535645089 chr15 83349301 83350768 + 11.9931535645089 NA intron (NM_025445, intron 1 of 15) CpG 213 NM_025445 66251 Mm.258910 NM_025445 ENSMUSG00000054277 Arfgap3 0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1 ADP-ribosylation factor GTPase activating protein 3 protein-coding common_peak2_382_4535_-0.231594628013809_12.0314076109353_11.9901388310597 chr4 141544688 141547740 + 11.9901388310597 NA promoter-TSS (NR_030695) promoter-TSS (NR_030695) 52 NR_030695 320456 Mm.32859 NM_177163 B330016D10Rik - RIKEN cDNA B330016D10 gene ncRNA common_peak2_225_1583_0.352775189279148_10.8057442147192_11.988398507131 chr19 10687675 10690603 + 11.988398507131 NA intron (NM_181403, intron 1 of 4) CpG 324 NM_181403 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding common_peak2_68_273_0.784563237286267_8.49031370160366_11.9849795652676 chr9 42471460 42472481 + 11.9849795652676 NA intron (NM_173038, intron 1 of 7) intron (NM_173038, intron 1 of 7) 256 NM_173038 272589 Mm.34483 NM_173038 ENSMUSG00000037287 Tbcel D330014K23|E130107N23Rik|Lrrc35 tubulin folding cofactor E-like protein-coding common_peak1_193_2129_-0.344687040563436_10.8842941948315_11.9849309678594 chr2 181496130 181497959 + 11.9849309678594 NA promoter-TSS (NM_025482) promoter-TSS (NM_025482) -98 NM_001291203 66314 Mm.136648 NM_025482 ENSMUSG00000000827 Tpd52l2 2810411G23Rik|AU016537|C86069|D54 tumor protein D52-like 2 protein-coding common_peak1_121_1297_-0.45094290576581_10.1166032151162_11.9839005323037 chr6 71830842 71831843 + 11.9839005323037 NA promoter-TSS (NM_001253689) promoter-TSS (NM_001253689) 22 NM_001253688 76614 Mm.235123 NM_029673 ENSMUSG00000052337 Immt 1700082C19Rik|D830041H16Rik|HMP|P87|P87/89|P89 inner membrane protein, mitochondrial protein-coding common_peak2_70_286_0.76825261917133_8.54903323626135_11.9831747792153 chr1 153708826 153710425 + 11.9831747792153 NA Intergenic Intergenic 28204 NR_046171 329271 Mm.384841 NR_046171 ENSMUSG00000100334 C230024C17Rik C230024C17 RIKEN cDNA C230024C17 gene ncRNA common_peak1_39_431_-0.837140963346336_8.3363170204903_11.9831008613266 chr1 172512443 172513105 + 11.9831008613266 NA Intergenic Intergenic -8356 NM_027972 71870 Mm.78373 NM_027972 ENSMUSG00000026546 Cfap45 1700028D05Rik|Ccdc19|Nesg1 cilia and flagella associated protein 45 protein-coding common_peak1_39_431_-0.837140963346336_8.3363170204903_11.9831008613266-2 chr19 46002709 46003475 + 11.9831008613266 NA promoter-TSS (NM_176785) promoter-TSS (NM_176785) -386 NM_176785 20170 Mm.101110 NM_176785 ENSMUSG00000074811 Hps6 5330434M19Rik|BLOC2|ru Hermansky-Pudlak syndrome 6 protein-coding common_peak2_304_2388_0.290433899468958_11.3674080881908_11.9819403470807 chr4 88031098 88035579 + 11.9819403470807 NA promoter-TSS (NM_027326) promoter-TSS (NM_027326) 69 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak1_116_617_0.545614937856771_9.54427049683276_11.9815779830202 chr5 3543522 3544638 + 11.9815779830202 NA intron (NM_001042501, intron 1 of 10) CpG 247 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak1_47_148_1.02121925881629_7.72977814987031_11.9797274970639 chr11 97120484 97121345 + 11.9797274970639 NA Intergenic Intergenic -5583 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding common_peak2_267_2002_0.315821616709728_11.1258575141676_11.9705914167825 chr1 160051195 160055146 + 11.9705914167825 NA intron (NM_001162896, intron 1 of 2) intron (NM_001162896, intron 1 of 2) 8790 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding common_peak2_107_548_0.574769850207108_9.38804726410875_11.9662972192674 chr15 51864586 51866293 + 11.9662972192674 NA promoter-TSS (NM_080635) promoter-TSS (NM_080635) 22 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak2_87_401_0.661970673887735_8.9820370281228_11.9661840968615 chr9 105642691 105643670 + 11.9661840968615 NA 5' UTR (NM_001081309, exon 1 of 20) 5' UTR (NM_001081309, exon 1 of 20) 185 NM_001081309 75669 Mm.274830 NM_029380 ENSMUSG00000032571 Pik3r4 2210010O15Rik|C730038E05Rik|C85833|D9Ertd418e phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150 protein-coding common_peak1_404_3497_0.242133095949548_11.8933811218964_11.9656870744135 chr5 90364971 90367499 + 11.9656870744135 NA promoter-TSS (NM_030886) promoter-TSS (NM_030886) -50 NM_198010 81702 Mm.245522 NM_030886 ENSMUSG00000055204 Ankrd17 4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697 ankyrin repeat domain 17 protein-coding common_peak1_210_2333_-0.327989506568386_11.0245940924232_11.9642625048476 chr13 113059730 113063172 + 11.9642625048476 NA intron (NM_001281487, intron 4 of 11) URR1A|DNA|hAT-Charlie -15063 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak2_330_3846_-0.252125869634545_11.7834551794793_11.9604726424633 chr19 37558526 37563322 + 11.9604726424633 NA intron (NM_175353, intron 1 of 21) B4|SINE|B4 10506 NM_175353 107371 Mm.24865 NM_175353 ENSMUSG00000053799 Exoc6 4833405E05Rik|AW413330|C430002C19|Sec15|Sec15l1|hbd|msec15 exocyst complex component 6 protein-coding common_peak1_95_1011_-0.515993484229503_9.72499683257956_11.9593252638632 chr10 79669076 79670112 + 11.9593252638632 NA exon (NM_148934, exon 1 of 2) exon (NM_148934, exon 1 of 2) 184 NM_148934 110012 Mm.22623 NM_148934 ENSMUSG00000020308 Tpgs1 AV005629|Gm16517|Gtrgeo22|PGs1 tubulin polyglutamylase complex subunit 1 protein-coding common_peak2_34_381_-0.895983113512214_8.12943727127964_11.9585617169965 chr5 149234410 149236005 + 11.9585617169965 NA Intergenic MLT1F|LTR|ERVL-MaLR -29797 NM_001308462 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding common_peak2_92_437_0.636029661286416_9.09280189024438_11.9581999473235 chr10 21251551 21253307 + 11.9581999473235 NA Intergenic Intergenic -43550 NM_001042593 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak1_13_180_-1.43989344825164_6.77989916295739_11.9553541690804 chr5 121398008 121398285 + 11.9553541690804 NA intron (NM_172722, intron 1 of 23) CpG 164 NM_172722 231713 Mm.33919 NM_172722 ENSMUSG00000042719 Naa25 4833422K13Rik|A630046C11|AI450868|C330023M02Rik|Mdm20 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding common_peak2_237_2663_-0.305693685645263_11.2265315242486_11.9536203710437 chr11 95832973 95836423 + 11.9536203710437 NA intron (NM_025659, intron 3 of 7) intron (NM_025659, intron 3 of 7) -7597 NM_023121 14710 Mm.46299 NM_023121 ENSMUSG00000038811 Gngt2 AV096488 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 protein-coding common_peak2_58_622_-0.677561947982177_8.94430737903291_11.9535229718107 chr11 98399738 98401283 + 11.9535229718107 NA promoter-TSS (NM_001033537) promoter-TSS (NM_001033537) -20 NM_001033537 320655 Mm.86519 NM_001033537 ENSMUSG00000038208 Pgap3 CAB2|D430035D22Rik|Perld1 post-GPI attachment to proteins 3 protein-coding common_peak1_301_2357_0.291784693192145_11.3492403495758_11.9526185844184 chr7 106548655 106552696 + 11.9526185844184 NA Intergenic Intergenic 93970 NM_001277179 434223 Mm.276443 NM_001277179 Gm1966 - predicted gene 1966 protein-coding common_peak1_45_490_-0.774506099034827_8.55232616479728_11.9523885948946 chr6 65597547 65598299 + 11.9523885948946 NA intron (NM_001001495, intron 4 of 7) intron (NM_001001495, intron 4 of 7) 7525 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak2_40_440_-0.823191580492096_8.37303905531147_11.9504681945535 chr9 56533674 56535039 + 11.9504681945535 NA Intergenic MIR3|SINE|MIR 101292 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding common_peak2_103_518_0.589055138655763_9.31411829768576_11.9439801255142 chr2 118553743 118555487 + 11.9439801255142 NA Intergenic Intergenic -4937 NM_138313 171543 Mm.210125 NM_138313 ENSMUSG00000040093 Bmf AW260063|AW411872 BCL2 modifying factor protein-coding common_peak1_60_642_-0.664155476280975_8.99659718918746_11.9408988892629 chr9 106428654 106429481 + 11.9408988892629 NA promoter-TSS (NM_009082) promoter-TSS (NM_009082) -472 NM_009082 19944 Mm.288696 NM_009082 ENSMUSG00000048758 Rpl29 Rpl43 ribosomal protein L29 protein-coding common_peak2_183_1188_0.402764737906923_10.4169153686991_11.9400785724457 chr8 86744866 86746854 + 11.9400785724457 NA non-coding (NR_027829, exon 1 of 1) non-coding (NR_027829, exon 1 of 1) 146 NM_009172 20437 Mm.324553 NM_009172 ENSMUSG00000036840 Siah1a AA982064|AI853500|Sinh1a seven in absentia 1A protein-coding common_peak2_52_176_0.948136215360114_7.94167365776305_11.9383997461061 chrX 100494212 100495049 + 11.9383997461061 NA intron (NM_008784, intron 1 of 5) intron (NM_008784, intron 1 of 5) 339 NM_008784 18518 Mm.7454 NM_008784 ENSMUSG00000031221 Igbp1 AI115586|AI662457|AW208785|C81413|Pc52|Tap42|p52 immunoglobulin (CD79A) binding protein 1 protein-coding common_peak2_54_580_-0.701103335018614_8.83184268589522_11.9369286895226 chr1 133366721 133368845 + 11.9369286895226 NA intron (NM_175443, intron 2 of 7) intron (NM_175443, intron 2 of 7) 4211 NM_175443 214253 Mm.52111 NM_175443 ENSMUSG00000070644 Etnk2 4933417N20Rik|AI197444|EKI 2|Eki2|Tuc1 ethanolamine kinase 2 protein-coding common_peak2_179_1962_-0.359441197528827_10.7591238587018_11.9358792403062 chr10 63242801 63245238 + 11.9358792403062 NA 5' UTR (NM_026101, exon 1 of 25) 5' UTR (NM_026101, exon 1 of 25) 222 NM_026101 67345 Mm.234437 NM_026101 ENSMUSG00000020064 Herc4 1700056O17Rik|4921531D01Rik|9530080M15Rik|mKIAA1593 hect domain and RLD 4 protein-coding common_peak1_22_34_1.80917778714854_6.03387191051924_11.9351057731419 chr8 46944911 46945532 + 11.9351057731419 NA Intergenic Intergenic -41704 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak1_51_171_0.95576880112519_7.90414915526469_11.9326866481713 chr10 42934403 42935272 + 11.9326866481713 NA intron (NM_172938, intron 5 of 8) L1MC3|LINE|L1 74325 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak1_31_352_-0.940658798959657_7.99319497379135_11.93027737429 chr4 135179023 135179831 + 11.93027737429 NA Intergenic Intergenic 58782 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_71_755_-0.604332439975693_9.26007620423323_11.9290384967098 chr4 121195726 121198307 + 11.9290384967098 NA Intergenic Intergenic -8482 NM_001081013 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding unique_peak2_11_160_-1.54375372120888_6.55904001751018_11.9273553286962 chr13 37432665 37433600 + 11.9273553286962 NA Intergenic Intergenic 87787 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding unique_peak2_15_199_-1.34760292664956_6.97005472644995_11.9272179425021 chr6 140313500 140314761 + 11.9272179425021 NA Intergenic Intergenic -109969 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak2_95_459_0.621510039520432_9.15624507070459_11.9269150365424 chr13 55622203 55623706 + 11.9269150365424 NA promoter-TSS (NM_007596) promoter-TSS (NM_007596) -51 NM_007596 12328 Mm.2313 NM_007596 ENSMUSG00000021501 Caml AI385748|Camlg calcium modulating ligand protein-coding common_peak1_95_459_0.621510039520432_9.15624507070459_11.9269150365424 chr11 108222470 108223886 + 11.9269150365424 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 120710 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_29_61_1.45446012221083_6.68142637149229_11.9260282089218 chr11 118338997 118339442 + 11.9260282089218 NA intron (NM_021440, intron 2 of 2) intron (NM_021440, intron 2 of 2) 3315 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 BC100451 Cep295nl|Ddc8|FS39|Kiaa1731nl cDNA sequence BC100451 protein-coding common_peak1_198_1327_0.381942362500492_10.5660106125972_11.9248787382017 chr15 34082181 34083867 + 11.9248787382017 NA 5' UTR (NM_026002, exon 1 of 12) 5' UTR (NM_026002, exon 1 of 12) 305 NM_026002 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding common_peak1_55_590_-0.69383725897325_8.86009569069091_11.9210383877662 chr12 84206887 84207687 + 11.9210383877662 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 11594 NM_001163501 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_550_5258_0.19865071804902_12.4598981405052_11.9189984914892 chr9 41077522 41085651 + 11.9189984914892 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) 75908 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding unique_peak2_9_141_-1.68522520306026_6.30713451797455_11.9166220887438 chr13 13232609 13233094 + 11.9166220887438 NA Intergenic CpG 50135 NM_001311129 107849 Mm.392548 NM_181852 ENSMUSG00000055360 Prl2c5 Ghd3|MRP-4|Mrpplf4|PLF-4 prolactin family 2, subfamily c, member 5 protein-coding common_peak1_32_74_1.348501257165_6.90306931907838_11.9143426577731 chr4 35223554 35224120 + 11.9143426577731 NA intron (NM_001081343, intron 1 of 10) intron (NM_001081343, intron 1 of 10) 2043 NM_001081343 73205 Mm.331544 NM_001081343 ENSMUSG00000028300 3110043O21Rik AI840585 RIKEN cDNA 3110043O21 gene protein-coding common_peak2_32_74_1.348501257165_6.90306931907838_11.9143426577731 chr2 35336440 35337085 + 11.9143426577731 NA intron (NM_013515, intron 1 of 6) CpG 247 NM_013515 13830 Mm.295284 NM_013515 ENSMUSG00000026880 Stom Epb7.2 stomatin protein-coding common_peak2_675_6872_0.174314226876289_12.833881357464_11.9085260090886 chr8 86851405 86858718 + 11.9085260090886 NA intron (NM_030563, intron 2 of 6) intron (NM_030563, intron 2 of 6) 30197 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_248_1811_0.330273145275397_10.9885038126839_11.9080043024996 chr5 145139058 145141438 + 11.9080043024996 NA promoter-TSS (NM_001033313) promoter-TSS (NM_001033313) -128 NM_001008705 231889 Mm.277413 NM_001008705 ENSMUSG00000038722 Bud31 C77604|EDG-2|EDG2|G10 BUD31 homolog protein-coding common_peak2_319_2550_0.280736288773726_11.4572153279893_11.905174688103 chr5 62762350 62767425 + 11.905174688103 NA intron (NM_178407, intron 1 of 32) intron (NM_178407, intron 1 of 32) 1290 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_50_540_-0.731814006699359_8.71357778047714_11.9040796802009 chr9 85120876 85122008 + 11.9040796802009 NA Intergenic Intergenic 205682 NM_001160378 212943 Mm.74610 NM_001160378 ENSMUSG00000032265 Fam46a BAP014|D930050G01Rik family with sequence similarity 46, member A protein-coding common_peak2_244_1771_0.333818935233987_10.958072356172_11.9024716160346 chr19 56547424 56549566 + 11.9024716160346 NA promoter-TSS (NM_018831) promoter-TSS (NM_018831) 234 NM_025811 66866 Mm.46346 NM_025811 ENSMUSG00000025078 Nhlrc2 1200003G01Rik|AI835049|AV002846|AW496455 NHL repeat containing 2 protein-coding common_peak1_35_390_-0.87972712424833_8.17116123518319_11.9023989054002 chr14 69978159 69978899 + 11.9023989054002 NA intron (NM_028560, intron 4 of 6) intron (NM_028560, intron 4 of 6) -98916 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding unique_peak2_8_132_-1.77720938481488_6.16667774309375_11.902102970352 chrX 102031405 102032462 + 11.902102970352 NA intron (NM_001163610, intron 1 of 7) intron (NM_001163610, intron 1 of 7) 39374 NM_001278534 331474 Mm.23297 NM_183318 ENSMUSG00000049191 Rgag4 6430402L03Rik|Mar5|Mart5|mKIAA2001 retrotransposon gag domain containing 4 protein-coding unique_peak1_17_18_2.25675784842908_5.37630643765813_11.901483040589 chr9 20950791 20951085 + 11.901483040589 NA intron (NM_001199432, intron 1 of 38) intron (NM_001199432, intron 1 of 38) 1685 NM_001199433 13433 Mm.128580 NM_010066 ENSMUSG00000004099 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI DNA methyltransferase (cytosine-5) 1 protein-coding unique_peak1_17_18_2.25675784842908_5.37630643765813_11.901483040589-2 chr9 44486011 44486376 + 11.901483040589 NA Intergenic Intergenic -12943 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak1_293_3366_-0.269624941577323_11.582435535039_11.8936494907424 chr11 78343211 78346933 + 11.8936494907424 NA promoter-TSS (NM_001313988) promoter-TSS (NM_001313988) -512 NM_001313988 22248 Mm.284811 NM_011676 ENSMUSG00000002058 Unc119 D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h unc-119 lipid binding chaperone protein-coding common_peak2_30_342_-0.955382561438507_7.94437348545356_11.8919354391588-2 chr7 143636105 143637611 + 11.8919354391588 NA 3' UTR (NM_023680, exon 7 of 7) 3' UTR (NM_023680, exon 7 of 7) -9013 NM_175649 244237 Mm.247498 NM_175649 ENSMUSG00000045362 Tnfrsf26 Tnfrh3|Tnfrsf24 tumor necrosis factor receptor superfamily, member 26 protein-coding common_peak2_30_342_-0.955382561438507_7.94437348545356_11.8919354391588 chr3 88716619 88717723 + 11.8919354391588 NA intron (NM_001163310, intron 1 of 4) intron (NM_001163310, intron 1 of 4) 317 NM_001163310 19769 Mm.4009 NM_009069 ENSMUSG00000028057 Rit1 RIBB|ROC1|Rit Ras-like without CAAX 1 protein-coding common_peak1_146_1578_-0.403784702796269_10.4229031044621_11.8893660846672 chr11 83640495 83642578 + 11.8893660846672 NA Intergenic Intergenic 7842 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak1_167_1045_0.426644441110625_10.2439893568023_11.8889778878608 chr13 93892356 93894223 + 11.8889778878608 NA intron (NM_009712, intron 6 of 7) intron (NM_009712, intron 6 of 7) 102512 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak1_117_1251_-0.457880130704437_10.0610787815804_11.8858460520847 chr15 82165521 82167175 + 11.8858460520847 NA intron (NM_033218, intron 1 of 18) intron (NM_033218, intron 1 of 18) 19079 NM_033218 20788 Mm.9002 NM_033218 ENSMUSG00000022463 Srebf2 AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc sterol regulatory element binding factor 2 protein-coding common_peak2_73_306_0.744301117027588_8.63424540388397_11.8840671524164 chr7 16043080 16045089 + 11.8840671524164 NA Intergenic Intergenic -27858 NM_001099277 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak2_52_559_-0.713541251501855_8.77251239119404_11.882211442807 chr1 40529562 40532372 + 11.882211442807 NA intron (NM_010553, intron 6 of 12) intron (NM_010553, intron 6 of 12) 15605 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_105_1118_-0.485640244346925_9.88517419880293_11.8817543375015 chr18 80714499 80715832 + 11.8817543375015 NA Intergenic Intergenic -2094 NM_001164109 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_105_1118_-0.485640244346925_9.88517419880293_11.8817543375015-2 chr7 16051938 16053436 + 11.8817543375015 NA Intergenic Intergenic -19255 NM_001099277 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak1_306_2411_0.288177080000052_11.3801027319001_11.8812828806919 chr4 155490666 155492841 + 11.8812828806919 NA intron (NM_001160017, intron 1 of 10) CpG 392 NM_001160016 14688 Mm.2344 NM_008142 ENSMUSG00000029064 Gnb1 AA409223|C77571|Gnb-1 guanine nucleotide binding protein (G protein), beta 1 protein-coding common_peak2_102_1086_-0.494588341250569_9.83884205440202_11.8795794792368 chr12 79645654 79648175 + 11.8795794792368 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 277819 NR_131075 77290 Mm.395042 NR_131073 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak1_37_410_-0.856018069098437_8.25498554913247_11.8795696739325 chr4 8928466 8929135 + 11.8795696739325 NA Intergenic Intergenic 238394 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_37_410_-0.856018069098437_8.25498554913247_11.8795696739325-2 chr4 124755577 124756311 + 11.8795696739325 NA intron (NR_126474, intron 7 of 24) intron (NR_126474, intron 7 of 24) 12163 NR_030480 735263 NR_030480 ENSMUSG00000076119 Mir698 Mirn698|mir-698|mmu-mir-698 microRNA 698 ncRNA common_peak2_90_956_-0.530030071765978_9.63736007860304_11.8791591922534 chr13 101709817 101712919 + 11.8791591922534 NA intron (NM_001077495, intron 2 of 15) PB1D10|SINE|Alu -18738 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_90_956_-0.530030071765978_9.63736007860304_11.8791591922534-2 chr17 6771152 6773486 + 11.8791591922534 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 10461 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak1_40_112_1.14126430265024_7.39081111374031_11.8788145083173 chr2 32737079 32738001 + 11.8788145083173 NA exon (NM_027529, exon 2 of 3) exon (NM_027529, exon 2 of 3) 3476 NM_027529 70730 Mm.401360 NM_027529 ENSMUSG00000009551 6330409D20Rik AA517851 RIKEN cDNA 6330409D20 gene protein-coding common_peak2_40_112_1.14126430265024_7.39081111374031_11.8788145083173 chr14 57103936 57104818 + 11.8788145083173 NA intron (NM_008125, intron 1 of 1) CpG 325 NM_008125 14619 Mm.390683 NM_008125 ENSMUSG00000046352 Gjb2 AI325222|Cnx26|Cx26|Gjb-2 gap junction protein, beta 2 protein-coding common_peak2_128_714_0.50806225474148_9.73583055903649_11.8776603283286 chr19 53162244 53164168 + 11.8776603283286 NA intron (NM_013758, intron 1 of 15) intron (NM_013758, intron 1 of 15) 19209 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak2_39_430_-0.833797520271967_8.33464529895312_11.8757900561753 chr7 29907987 29908995 + 11.8757900561753 NA promoter-TSS (NM_001243908) promoter-TSS (NM_001243908) -26 NM_001243908 73729 Mm.333743 NM_001243908 ENSMUSG00000099689 Zfp383 1110003H10Rik zinc finger protein 383 protein-coding unique_peak2_39_430_-0.833797520271967_8.33464529895312_11.8757900561753 chr5 92277135 92278712 + 11.8757900561753 NA exon (NM_025972, exon 1 of 11) exon (NM_025972, exon 1 of 11) 258 NM_001163687 67111 Mm.28890 NM_025972 ENSMUSG00000029413 Naaa 2210023K21Rik|3830414F09Rik|Asahl N-acylethanolamine acid amidase protein-coding common_peak2_307_2422_0.287367473694433_11.3862624262986_11.8749007945376 chr2 167333220 167339592 + 11.8749007945376 NA intron (NM_019835, intron 1 of 8) intron (NM_019835, intron 1 of 8) 12772 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak2_88_409_0.653538269258743_9.00624923413482_11.8734904763904 chr11 117963050 117965633 + 11.8734904763904 NA Intergenic Intergenic 5025 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding unique_peak2_24_284_-1.06880291691572_7.62041665059424_11.8726263191263 chr8 91133389 91134752 + 11.8726263191263 NA promoter-TSS (NM_001302268) promoter-TSS (NM_001302268) -43 NM_001302268 14339 Mm.324588 NM_010241 ENSMUSG00000031667 Aktip AL023020|Fif|Ft|Ft1|Fts thymoma viral proto-oncogene 1 interacting protein protein-coding unique_peak2_4_93_-2.31667924641957_5.39624922846785_11.8692036045893 chr2 59563984 59564496 + 11.8692036045893 NA Intergenic Intergenic -47802 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak1_25_294_-1.04914989960827_7.67999619444507_11.8679186434275 chr1 166003020 166003531 + 11.8679186434275 NA promoter-TSS (NM_198932) promoter-TSS (NM_198932) -641 NM_011137 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding unique_peak2_25_294_-1.04914989960827_7.67999619444507_11.8679186434275 chr3 27153230 27154653 + 11.8679186434275 NA promoter-TSS (NM_007900) promoter-TSS (NM_007900) -63 NM_001177626 13605 Mm.261453 NM_007900 ENSMUSG00000027699 Ect2 AI528536|mKIAA4037 ect2 oncogene protein-coding common_peak2_84_892_-0.550874517268731_9.52707910648686_11.8664940754735 chr9 32914253 32916683 + 11.8664940754735 NA intron (NR_131058, intron 1 of 3) intron (NR_131058, intron 1 of 3) 13498 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA unique_peak1_28_57_1.490682319385_6.60332215482007_11.8660855520316 chr17 22817235 22817942 + 11.8660855520316 NA non-coding (NR_030709, exon 1 of 5) non-coding (NR_030709, exon 1 of 5) 159 NR_030709 100042679 Mm.484007 NR_030709 Gm16386 EG545191|ENSMUSG00000073442|Gm21017 zinc finger protein 946 pseudogene pseudo common_peak1_66_261_0.797120698612273_8.43198335084359_11.8591408129275 chr2 4917000 4917930 + 11.8591408129275 NA Intergenic MTC|LTR|ERVL-MaLR -1531 NM_010726 16922 Mm.391704 NM_010726 ENSMUSG00000026664 Phyh AI256161|AI265699|Lnap1|PAHX phytanoyl-CoA hydroxylase protein-coding common_peak1_29_332_-0.970721934473558_7.89401739983448_11.8589822362296 chr17 23828984 23829657 + 11.8589822362296 NA promoter-TSS (NM_026305) promoter-TSS (NM_026305) -211 NM_026305 67673 Mm.153758 NM_026305 ENSMUSG00000055839 Elob 0610040H15Rik|Tceb2 elongin B protein-coding common_peak2_150_897_0.457948750244405_10.0395460098633_11.858660288521 chr16 52084784 52088446 + 11.858660288521 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 55066 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak2_113_1206_-0.466098930018491_10.0041604957458_11.8575295884533 chr9 66945332 66947123 + 11.8575295884533 NA intron (NM_001311101, intron 1 of 4) CpG 151 NM_026467 67941 Mm.30120 NM_026467 ENSMUSG00000036781 Rps27l 1810034D23Rik ribosomal protein S27-like protein-coding common_peak1_132_747_0.497005852774723_9.795397386275_11.8574040703037 chr7 120676783 120678301 + 11.8574040703037 NA promoter-TSS (NM_001164580) promoter-TSS (NM_001164580) -78 NM_001164580 233812 Mm.276479 NM_001164580 ENSMUSG00000046096 BC030336 - cDNA sequence BC030336 protein-coding common_peak2_74_786_-0.59007011721782_9.32518476689858_11.8538014494347-2 chr10 80172281 80173864 + 11.8538014494347 NA exon (NM_027207, exon 1 of 3) exon (NM_027207, exon 1 of 3) 128 NM_027207 69770 Mm.302754 NM_027207 ENSMUSG00000035595 1600002K03Rik - RIKEN cDNA 1600002K03 gene protein-coding common_peak2_74_786_-0.59007011721782_9.32518476689858_11.8538014494347 chr1 84406131 84407957 + 11.8538014494347 NA intron (NM_152915, intron 9 of 12) intron (NM_152915, intron 9 of 12) -122399 NM_001003948 98496 Mm.187470 NM_001003948 ENSMUSG00000045658 Pid1 5033414K04Rik|NYGGF4 phosphotyrosine interaction domain containing 1 protein-coding common_peak2_22_265_-1.11682163140768_7.49687161979735_11.8524440830362 chr1 178186649 178187476 + 11.8524440830362 NA promoter-TSS (NM_024282) promoter-TSS (NM_024282) -355 NM_024282 78825 Mm.440132 NM_024282 ENSMUSG00000026502 Desi2 5830417C01Rik|DeSI-2|Fam152a|Pppde1 desumoylating isopeptidase 2 protein-coding common_peak2_65_255_0.803932258847237_8.40196612942362_11.8506430872897 chr2 158794080 158795352 + 11.8506430872897 NA promoter-TSS (NM_001291144) promoter-TSS (NM_001291144) -91 NM_145742 71715 Mm.315652 NM_145742 ENSMUSG00000027655 Dhx35 1200009D07Rik|Ddx35 DEAH (Asp-Glu-Ala-His) box polypeptide 35 protein-coding common_peak2_193_1281_0.387770127931024_10.5180656105843_11.8475525062054 chr14 70074023 70077677 + 11.8475525062054 NA Intergenic Intergenic -1595 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding common_peak2_140_813_0.478380619313056_9.90807529392277_11.8457413794217 chr9 66238564 66241394 + 11.8457413794217 NA intron (NM_010019, intron 4 of 11) intron (NM_010019, intron 4 of 11) 81753 NM_010019 13143 Mm.304472 NM_010019 ENSMUSG00000032380 Dapk2 - death-associated protein kinase 2 protein-coding common_peak2_55_194_0.905846747454671_8.06025368747695_11.8440280963961 chr5 90930763 90932037 + 11.8440280963961 NA exon (NM_026788, exon 1 of 8) exon (NM_026788, exon 1 of 8) 204 NM_026788 665563 Mm.153030 NM_026788 ENSMUSG00000029376 Mthfd2l 1110019K23Rik|C630010D07Rik methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like protein-coding common_peak1_305_2402_0.28779667133723_11.3745192687985_11.8377811519251 chr13 49214974 49216840 + 11.8377811519251 NA intron (NM_026738, intron 1 of 5) CpG 119 NM_026738 68480 Mm.3336 NM_026738 ENSMUSG00000037960 Card19 1110007C09Rik|AI851695|Bincard caspase recruitment domain family, member 19 protein-coding common_peak1_67_268_0.78529852079026_8.46411162295175_11.8373432641354 chr16 57495115 57496346 + 11.8373432641354 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) -53512 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak2_511_4777_0.207123680600615_12.3257529787566_11.8322415849552 chr1 181210130 181213985 + 11.8322415849552 NA promoter-TSS (NM_145514) promoter-TSS (NM_145514) -79 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak1_28_322_-0.986727040181356_7.84202683460325_11.8320048744997 chrX 42408588 42409139 + 11.8320048744997 NA Intergenic ORR1A2|LTR|ERVL-MaLR -93702 NM_011364 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak2_182_1995_-0.354242038137004_10.7857749862688_11.8317206303193 chr1 53790076 53793864 + 11.8317206303193 NA Intergenic Intergenic -6755 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding unique_peak2_6_113_-1.99954988651953_5.83311507090498_11.8297505302515 chr14 27316466 27317331 + 11.8297505302515 NA intron (NM_001289686, intron 4 of 12) intron (NM_001289686, intron 4 of 12) -19139 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_6_113_-1.99954988651953_5.83311507090498_11.8297505302515-2 chr2 89920496 89921149 + 11.8297505302515 NA Intergenic ERVB4_3-I_MM-int|LTR|ERVK -8989 NM_146978 258980 Mm.223370 NM_146978 ENSMUSG00000049149 Olfr1258 MOR232-3 olfactory receptor 1258 protein-coding common_peak2_55_589_-0.691394083044923_8.85887410272674_11.8293005476113 chr7 80323498 80324939 + 11.8293005476113 NA 5' UTR (NM_173445, exon 1 of 9) 5' UTR (NM_173445, exon 1 of 9) 236 NM_173445 269955 Mm.474502 NM_173445 ENSMUSG00000038930 Rccd1 5830436H09|E430018M08Rik RCC1 domain containing 1 protein-coding common_peak2_91_431_0.636797924302755_9.07328646431485_11.8281799229505 chr12 75726179 75728189 + 11.8281799229505 NA intron (NM_030750, intron 1 of 2) B1_Mus2|SINE|Alu 8545 NM_030750 81535 Mm.280199 NM_030750 ENSMUSG00000021054 Sgpp1 AI463453|SPP|SPP1|Spph1 sphingosine-1-phosphate phosphatase 1 protein-coding common_peak2_117_627_0.537517967336553_9.56337973255991_11.8279980582601 chr11 87662482 87665872 + 11.8279980582601 NA 5' UTR (NM_172448, exon 2 of 10) 5' UTR (NM_172448, exon 2 of 10) 1090 NM_172448 207742 Mm.440230 NM_172448 ENSMUSG00000034177 Rnf43 4732452J19Rik ring finger protein 43 protein-coding unique_peak1_18_21_2.14093258475959_5.52989791101709_11.823956035129 chr17 23983197 23983721 + 11.823956035129 NA Intergenic Intergenic -8229 NM_013921 30943 Mm.142568 NM_013921 ENSMUSG00000024124 Prss30 2010015P21Rik|Disp|Disp1|Tmprss8 protease, serine 30 protein-coding common_peak1_18_21_2.14093258475959_5.52989791101709_11.823956035129 chr9 48820689 48821078 + 11.823956035129 NA intron (NM_001033324, intron 2 of 6) intron (NM_001033324, intron 2 of 6) 15062 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding unique_peak1_18_21_2.14093258475959_5.52989791101709_11.823956035129-2 chr17 71285684 71286104 + 11.823956035129 NA intron (NM_145158, intron 2 of 7) intron (NM_145158, intron 2 of 7) 25071 NM_145158 246707 Mm.23462 NM_145158 ENSMUSG00000024053 Emilin2 FOAP-10 elastin microfibril interfacer 2 protein-coding common_peak2_85_388_0.668713136454112_8.93798291321325_11.8212241648415 chr2 32115347 32116855 + 11.8212241648415 NA Intergenic MIR3|SINE|MIR 20450 NM_145521 227721 Mm.257236 NM_145521 ENSMUSG00000051373 Plpp7 D830019K17Rik|NET39|Ppapdc3 phospholipid phosphatase 7 (inactive) protein-coding common_peak2_167_1046_0.425265850426758_10.2446786521442_11.8199000095524 chr7 104445299 104447855 + 11.8199000095524 NA intron (NM_009099, intron 1 of 7) intron (NM_009099, intron 1 of 7) 18616 NM_009099 20128 Mm.295578 NM_009099 ENSMUSG00000030921 Trim30a Rpt-1|Rpt1|Trim30 tripartite motif-containing 30A protein-coding common_peak1_131_1406_-0.427862043202943_10.2444755916351_11.8199000095524 chr9 106159647 106160729 + 11.8199000095524 NA Intergenic Intergenic -2050 NM_174846 235582 Mm.335420 NM_174846 ENSMUSG00000020258 Glyctk 6230410P16Rik|C430006L12 glycerate kinase protein-coding unique_peak1_27_53_1.53167724785446_6.5207261260907_11.8197837243636 chr4 126148374 126148867 + 11.8197837243636 NA 5' UTR (NM_172145, exon 1 of 3) 5' UTR (NM_172145, exon 1 of 3) 617 NM_172145 230752 Mm.41569 NM_172145 ENSMUSG00000050212 Eva1b 2610027C15Rik|Fam176b eva-1 homolog B (C. elegans) protein-coding common_peak1_27_53_1.53167724785446_6.5207261260907_11.8197837243636 chr1 119836472 119837039 + 11.8197837243636 NA intron (NM_019933, intron 1 of 26) intron (NM_019933, intron 1 of 26) 316 NM_019933 19258 Mm.458796 NM_019933 ENSMUSG00000026384 Ptpn4 PTPMEG|Ptn4|TEP|TEP/mPTPMEG|hPTP-MEG protein tyrosine phosphatase, non-receptor type 4 protein-coding common_peak1_56_599_-0.684319970945708_8.88665870502303_11.8166371485527 chr3 89187895 89188693 + 11.8166371485527 NA exon (NM_001014995, exon 11 of 12) exon (NM_001014995, exon 11 of 12) 5069 NM_001014995 68521 Mm.274708 NM_001014995 ENSMUSG00000032657 Fam189b 1110013L07Rik family with sequence similarity 189, member B protein-coding unique_peak2_36_400_-0.867674775243509_8.21362103883316_11.8137661304849 chr7 16056164 16057927 + 11.8137661304849 NA Intergenic Intergenic -14897 NM_001099277 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak1_78_827_-0.571387866386008_9.40779302430632_11.8125953792344 chr2 122027626 122028409 + 11.8125953792344 NA promoter-TSS (NM_144545) promoter-TSS (NM_144545) -563 NM_144545 78655 Mm.458184 NM_144545 ENSMUSG00000027236 Eif3j1 1810016I04Rik|2700079K05Rik|AA409117|AA409446|C78575|Eif3j|Eif3j-1|Eif3j-2|Eif3j2|Eif3s1|eIF-3-alpha-A|eIF-3-alpha-B|eIF3-alpha|eIF3-p35|eIF3j-A|eIF3j-B eukaryotic translation initiation factor 3, subunit J1 protein-coding common_peak1_31_351_-0.936566044325772_7.99114859647441_11.8120816077956 chr7 4322734 4323451 + 11.8120816077956 NA Intergenic L1VL1|LINE|L1 -14632 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak2_46_499_-0.76265319723607_8.58445768604405_11.8110346053803 chr11 60351934 60353141 + 11.8110346053803 NA promoter-TSS (NM_029044) promoter-TSS (NM_029044) 368 NM_153080 216810 Mm.218875 NM_153080 ENSMUSG00000000538 Tom1l2 2900016I08Rik|A730055F12Rik|AU042072|Srebf1 target of myb1-like 2 (chicken) protein-coding common_peak1_183_1190_0.400340039788466_10.4181277177583_11.8103693763229 chr4 35224925 35226844 + 11.8103693763229 NA promoter-TSS (NM_001081343) promoter-TSS (NM_001081343) -4 NM_001081343 73205 Mm.331544 NM_001081343 ENSMUSG00000028300 3110043O21Rik AI840585 RIKEN cDNA 3110043O21 gene protein-coding common_peak1_294_2286_0.294391341508474_11.3064363211659_11.8101116614438 chr1 55130420 55132029 + 11.8101116614438 NA promoter-TSS (NM_025283) promoter-TSS (NM_025283) -21 NM_001310585 19070 Mm.291037 NM_025283 ENSMUSG00000025979 Mob4 2610109B12Rik|Mobkl3|Phocn|Prei3 MOB family member 4, phocein protein-coding common_peak2_119_643_0.530964176855798_9.59639896654252_11.8086098464014 chr1 37472884 37475427 + 11.8086098464014 NA intron (NM_001290801, intron 4 of 14) intron (NM_001290801, intron 4 of 14) 14450 NR_024017 77633 Mm.483177 NR_024017 ENSMUSG00000103948 4930594C11Rik - G1 to S phase transition pseudogene pseudo common_peak1_243_1763_0.333109227862161_10.9511894594886_11.8068005897652 chr2 154790957 154792608 + 11.8068005897652 NA intron (NM_001139511, intron 1 of 7) CpG 672 NM_001139511 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding common_peak2_141_822_0.475023236611747_9.9222602387275_11.8048199344209 chr10 60388814 60391742 + 11.8048199344209 NA intron (NR_045556, intron 30 of 68) MIR|SINE|MIR -9448 NM_001164374 100302688 Mm.444135 NM_001164374 ENSMUSG00000090439 Gm17455 - predicted gene, 17455 protein-coding common_peak1_47_508_-0.751134066797244_8.61595481267707_11.8033238050732-2 chr3 90080959 90081808 + 11.8033238050732 NA intron (NM_001271764, intron 1 of 8) PB1D10|SINE|Alu 1862 NM_001293749 59069 Mm.240839 NM_022314 ENSMUSG00000027940 Tpm3 TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm tropomyosin 3, gamma protein-coding common_peak1_47_508_-0.751134066797244_8.61595481267707_11.8033238050732 chr17 25115543 25116533 + 11.8033238050732 NA promoter-TSS (NM_027880) promoter-TSS (NM_027880) -71 NM_001163661 71718 Mm.288702 NM_027880 ENSMUSG00000024170 Telo2 1200003M09Rik|AI415602|Tel2|mKIAA0683 telomere maintenance 2 protein-coding common_peak2_248_1813_0.328681644793109_10.9892995629251_11.8029340290622 chr14 18237787 18239841 + 11.8029340290622 NA exon (NM_011584, exon 1 of 8) exon (NM_011584, exon 1 of 8) 292 NM_011584 353187 Mm.26587 NM_011584 ENSMUSG00000021775 Nr1d2 RVR|Rev-erb nuclear receptor subfamily 1, group D, member 2 protein-coding common_peak2_215_1490_0.35997995811522_10.7220545213411_11.7991027675631 chr14 57664044 57665939 + 11.7991027675631 NA promoter-TSS (NM_020506) promoter-TSS (NM_020506) -35 NM_020506 57258 Mm.202747 NM_020506 ENSMUSG00000021952 Xpo4 B430309A01Rik|mKIAA1721 exportin 4 protein-coding common_peak1_205_1394_0.372110788246546_10.6321048008398_11.7990959861215 chr16 32430368 32432152 + 11.7990959861215 NA promoter-TSS (NM_001163160) promoter-TSS (NM_001163160) 30 NM_001163160 13026 Mm.98775 NM_009981 ENSMUSG00000005615 Pcyt1a CTalpha|Cctalpha|Ctpct|Cttalpha phosphate cytidylyltransferase 1, choline, alpha isoform protein-coding common_peak1_26_302_-1.02096641663336_7.73269077515627_11.7987884196476 chr5 105555753 105556436 + 11.7987884196476 NA intron (NM_133897, intron 2 of 3) L1MB1|LINE|L1 36623 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak2_26_302_-1.02096641663336_7.73269077515627_11.7987884196476 chr4 133844387 133845211 + 11.7987884196476 NA Intergenic B3A|SINE|B2 29932 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak1_47_149_1.01156908878257_7.73460323488717_11.7987884196476 chr2 167375231 167376259 + 11.7987884196476 NA Intergenic RSINE1|SINE|B4 -26567 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak2_156_950_0.444174103545086_10.1153885826331_11.7974376657593 chr7 12834037 12835754 + 11.7974376657593 NA promoter-TSS (NM_022981) promoter-TSS (NM_022981) 85 NM_022981 65020 Mm.292297 NM_022981 ENSMUSG00000058638 Zfp110 2900024E01Rik|N28112|NRIF|Nrif1 zinc finger protein 110 protein-coding common_peak2_163_1011_0.431674312743828_10.1988307310662_11.7966544545279 chr12 111573818 111575602 + 11.7966544545279 NA promoter-TSS (NR_045295) promoter-TSS (NR_045295) 200 NM_022801 17169 Mm.260504 NM_021516 ENSMUSG00000007411 Mark3 1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10 MAP/microtubule affinity regulating kinase 3 protein-coding unique_peak1_19_24_2.04727803785605_5.66749520870275_11.7960708292944-2 chr4 44016048 44016507 + 11.7960708292944 NA intron (NM_016760, intron 1 of 5) B1_Mur2|SINE|Alu 3627 NM_001290470 12757 Mm.298875 NM_016760 ENSMUSG00000028478 Clta AV026556|Lca clathrin, light polypeptide (Lca) protein-coding unique_peak2_5_103_-2.13988887242171_5.63049528193024_11.7960708292944 chr2 30077506 30078166 + 11.7960708292944 NA promoter-TSS (NM_153805) promoter-TSS (NM_153805) -930 NM_153805 263803 Mm.233843 NM_153805 ENSMUSG00000026785 Pkn3 AW209115|BC034126 protein kinase N3 protein-coding unique_peak1_19_24_2.04727803785605_5.66749520870275_11.7960708292944 chr11 74962419 74962833 + 11.7960708292944 NA intron (NM_001002764, intron 8 of 18) intron (NM_001002764, intron 8 of 18) 36754 NM_001002764 103677 Mm.288460 NM_001002764 ENSMUSG00000038290 Smg6 AI317223|AU041178 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding unique_peak1_19_24_2.04727803785605_5.66749520870275_11.7960708292944-3 chr5 64884239 64884690 + 11.7960708292944 NA Intergenic Intergenic 48235 NM_030682 21897 Mm.273024 NM_030682 ENSMUSG00000044827 Tlr1 - toll-like receptor 1 protein-coding unique_peak2_33_370_-0.905126804460275_8.08271197439067_11.7905584255179 chrX 50613717 50615715 + 11.7905584255179 NA intron (NR_015505, intron 4 of 19) intron (NR_015505, intron 4 of 19) 20605 NR_015505 103012 Mm.482523 NR_015505 ENSMUSG00000085396 Firre 5830467J12Rik|6720401G13Rik|AW048145 functional intergenic repeating RNA element ncRNA common_peak1_216_1499_0.359471528616533_10.7304825496915_11.7890873023415 chr10 62448933 62450564 + 11.7890873023415 NA promoter-TSS (NM_181423) promoter-TSS (NM_181423) -55 NM_181423 338359 Mm.235898 NM_181423 ENSMUSG00000020079 Supv3l1 6330443E10Rik suppressor of var1, 3-like 1 (S. cerevisiae) protein-coding common_peak1_166_1807_-0.373432356727228_10.6334627840516_11.7846571736283 chr4 134913785 134915497 + 11.7846571736283 NA intron (NM_027935, intron 1 of 6) intron (NM_027935, intron 1 of 6) 275 NM_027935 71817 Mm.88349 NM_027935 ENSMUSG00000028822 Tmem50a 3200001F09Rik|CAM|Smp1 transmembrane protein 50A protein-coding common_peak1_51_549_-0.721254252584734_8.74266068211966_11.7837519261293-2 chr7 7120776 7121777 + 11.7837519261293 NA exon (NM_172738, exon 1 of 5) exon (NM_172738, exon 1 of 5) 200 NM_172738 232853 Mm.23838 NM_172738 ENSMUSG00000062116 Zfp954 5730403M16Rik|8030437F07|AA123315 zinc finger protein 954 protein-coding common_peak1_51_549_-0.721254252584734_8.74266068211966_11.7837519261293 chr7 3452805 3453813 + 11.7837519261293 NA Intergenic Intergenic 28647 NM_133183 54378 Mm.424047 NM_133183 ENSMUSG00000078815 Cacng6 2310033H20Rik calcium channel, voltage-dependent, gamma subunit 6 protein-coding common_peak1_75_320_0.727159338647301_8.69000915644595_11.7806844303576 chr6 43265273 43266446 + 11.7806844303576 NA intron (NM_133674, intron 1 of 14) intron (NM_133674, intron 1 of 14) 215 NM_133674 54324 Mm.320978 NM_133674 ENSMUSG00000033542 Arhgef5 2210412D05Rik|AA717842|AW495314|Tim1 Rho guanine nucleotide exchange factor (GEF) 5 protein-coding common_peak1_52_177_0.940008334476715_7.94573759820475_11.7722635840572 chr2 19371289 19371994 + 11.7722635840572 NA promoter-TSS (NM_029619) promoter-TSS (NM_029619) 5 NM_029619 76467 Mm.27166 NM_029619 ENSMUSG00000023094 Msrb2 2310050L06Rik|Mrsb|Msrb|Pilb methionine sulfoxide reductase B2 protein-coding common_peak1_109_1160_-0.473248927293294_9.94452779321892_11.7721850283143 chr8 60992749 60994014 + 11.7721850283143 NA 5' UTR (NM_001293637, exon 1 of 35) 5' UTR (NM_001293637, exon 1 of 35) 188 NM_175089 18004 Mm.486881 NM_175089 ENSMUSG00000031644 Nek1 D8Ertd790e|kat NIMA (never in mitosis gene a)-related expressed kinase 1 protein-coding common_peak1_33_79_1.30822047727316_6.97603833352395_11.7716906474625 chr1 151690693 151691472 + 11.7716906474625 NA intron (NM_022018, intron 6 of 13) intron (NM_022018, intron 6 of 13) -64292 NM_001311165 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding common_peak1_33_79_1.30822047727316_6.97603833352395_11.7716906474625-2 chr10 62325772 62326548 + 11.7716906474625 NA intron (NM_010438, intron 4 of 21) B1_Mur4|SINE|Alu 14261 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding unique_peak1_33_79_1.30822047727316_6.97603833352395_11.7716906474625 chr3 67582703 67583312 + 11.7716906474625 NA intron (NM_025813, intron 1 of 15) CpG 239 NM_025813 66868 Mm.491153 NM_025813 ENSMUSG00000027775 Mfsd1 1200003O06Rik major facilitator superfamily domain containing 1 protein-coding common_peak1_33_79_1.30822047727316_6.97603833352395_11.7716906474625-3 chr3 101012331 101012882 + 11.7716906474625 NA intron (NM_001167906, intron 5 of 8) intron (NM_001167906, intron 5 of 8) 16889 NM_001167906 630146 Mm.190915 NM_001099332 ENSMUSG00000086564 Cd101 EWI-101|Gm1016|Gm734|Igsf2 CD101 antigen protein-coding common_peak1_83_375_0.676110414493573_8.89264405892443_11.7685667925595 chr2 32115315 32116749 + 11.7685667925595 NA Intergenic Intergenic 20381 NM_145521 227721 Mm.257236 NM_145521 ENSMUSG00000051373 Plpp7 D830019K17Rik|NET39|Ppapdc3 phospholipid phosphatase 7 (inactive) protein-coding common_peak1_322_3737_-0.25395440775384_11.7410736498682_11.7672685034211 chr4 32248415 32250843 + 11.7672685034211 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -167806 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_157_959_0.441820806691155_10.1278009989541_11.7667880406257 chr13 108043873 108045128 + 11.7667880406257 NA promoter-TSS (NM_001048250) promoter-TSS (NM_001048250) 26 NM_001048250 75616 Mm.491164 NM_001048250 ENSMUSG00000071180 Smim15 2810008M24Rik small integral membrane protein 15 protein-coding common_peak1_146_865_0.462787538337244_9.98961698389535_11.7654725295993 chr1 64955933 64957322 + 11.7654725295993 NA intron (NM_001039493, intron 1 of 7) CpG 197 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_142_831_0.471750628441335_9.93631503236176_11.7649109994307 chr5 65763011 65765610 + 11.7649109994307 NA intron (NM_001024917, intron 1 of 19) CpG 789 NM_001024917 333789 Mm.332398 NM_001024917 ENSMUSG00000037795 N4bp2 B3bp|E430014I16|Gm1791|Gm868 NEDD4 binding protein 2 protein-coding common_peak1_51_172_0.947405328190563_7.90833089173201_11.7642590638611 chrX 100494246 100495031 + 11.7642590638611 NA intron (NM_008784, intron 1 of 5) intron (NM_008784, intron 1 of 5) 347 NM_008784 18518 Mm.7454 NM_008784 ENSMUSG00000031221 Igbp1 AI115586|AI662457|AW208785|C81413|Pc52|Tap42|p52 immunoglobulin (CD79A) binding protein 1 protein-coding common_peak2_61_650_-0.653219217244972_9.01990412454315_11.762876275641 chr11 55460416 55462184 + 11.762876275641 NA promoter-TSS (NM_009720) promoter-TSS (NM_009720) -162 NM_009720 11927 Mm.217759 NM_009720 ENSMUSG00000018585 Atox1 AI256639|Atx1 antioxidant 1 copper chaperone protein-coding common_peak2_62_660_-0.64689730155591_9.04505781072974_11.7624409138157-2 chr7 16873966 16875879 + 11.7624409138157 NA promoter-TSS (NM_001081655) promoter-TSS (NM_001081655) -395 NM_001081655 629378 Mm.491123 NM_001081655 ENSMUSG00000078794 Dact3 EG666671|naa-3 dishevelled-binding antagonist of beta-catenin 3 protein-coding common_peak2_62_660_-0.64689730155591_9.04505781072974_11.7624409138157 chr17 24425743 24427542 + 11.7624409138157 NA promoter-TSS (NM_010023) promoter-TSS (NM_010023) -41 NM_010023 13177 Mm.291743 NM_010023 ENSMUSG00000024132 Eci1 Dci|eci enoyl-Coenzyme A delta isomerase 1 protein-coding common_peak1_72_764_-0.596996911194386_9.28081748198282_11.76188634762 chr15 102090523 102091947 + 11.76188634762 NA intron (NM_145625, intron 9 of 14) B4|SINE|B4 -11753 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak2_312_2478_0.28290063990749_11.4169928760405_11.7594945826993 chr4 40267667 40270911 + 11.7594945826993 NA promoter-TSS (NR_045265) promoter-TSS (NR_045265) -290 NR_045265 100504309 Mm.392019 NR_045265 Toporsos 2010003O02Rik topoisomerase I binding, arginine/serine-rich, opposite strand ncRNA common_peak1_155_942_0.445054111305478_10.1036410163278_11.7562350904532 chr19 47136947 47138692 + 11.7562350904532 NA intron (NM_133746, intron 1 of 2) intron (NM_133746, intron 1 of 2) 475 NM_133746 72691 Mm.31663 NM_133746 ENSMUSG00000033033 Calhm2 2810048G17Rik|Fam26b calcium homeostasis modulator 2 protein-coding common_peak2_436_3876_0.228295969359477_12.0348730044309_11.7547832165942 chr6 122299195 122304625 + 11.7547832165942 NA Intergenic RLTR28B|LTR|ERVL -7100 NM_010749 17113 Mm.249225 NM_010749 ENSMUSG00000007458 M6pr CD-MPR|Mpr46 mannose-6-phosphate receptor, cation dependent protein-coding common_peak1_21_254_-1.13455569416491_7.4270755897764_11.7523812583357 chr5 114378574 114379155 + 11.7523812583357 NA intron (NM_026145, intron 1 of 6) intron (NM_026145, intron 1 of 6) 1641 NM_026145 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding common_peak2_65_691_-0.630695968789489_9.11928024324198_11.7500644136201 chr2 79120368 79122131 + 11.7500644136201 NA Intergenic Intergenic -134177 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_325_2618_0.275656410757129_11.4926285497292_11.7499415240066 chr19 41381521 41385686 + 11.7499415240066 NA intron (NM_031376, intron 1 of 16) intron (NM_031376, intron 1 of 16) 1467 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak2_408_3549_0.238236417030535_11.9127215177947_11.7396225126321 chr3 95227609 95232429 + 11.7396225126321 NA intron (NM_001038708, intron 1 of 4) intron (NM_001038708, intron 1 of 4) 1076 NM_001038708 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding common_peak1_205_1395_0.371076968753444_10.6326217105864_11.7394623783445 chr17 71183048 71184691 + 11.7394623783445 NA promoter-TSS (NM_022882) promoter-TSS (NM_022882) -109 NM_022882 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak1_25_293_-1.04425110019543_7.67754679473865_11.7392649053142 chr6 54866045 54866554 + 11.7392649053142 NA intron (NM_199143, intron 2 of 4) intron (NM_199143, intron 2 of 4) 49383 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak2_25_293_-1.04425110019543_7.67754679473865_11.7392649053142 chr12 110991590 110992670 + 11.7392649053142 NA Intergenic Intergenic -2268 NR_036598 77878 Mm.293198 NR_036598 6030440G07Rik - RIKEN cDNA 6030440G07 gene ncRNA common_peak1_53_183_0.925257921968938_7.98619091704148_11.7386227373586 chr5 109996017 109997022 + 11.7386227373586 NA promoter-TSS (NM_145563) promoter-TSS (NM_145563) -8 NM_145563 69504 Mm.441438 NM_145563 ENSMUSG00000066613 Zfp932 2310001H12Rik|Znf431 zinc finger protein 932 protein-coding common_peak1_48_155_0.991474018048436_7.78113922788647_11.7378931906066 chr1 135267503 135268161 + 11.7378931906066 NA intron (NM_145417, intron 6 of 10) intron (NM_145417, intron 6 of 10) -9360 NM_007921 13710 Mm.441439 NM_007921 ENSMUSG00000003051 Elf3 ESE-1|ESX|jen E74-like factor 3 protein-coding common_peak1_55_588_-0.688946762626179_8.85765044251737_11.7378448144958 chr4 141958426 141959427 + 11.7378448144958 NA intron (NM_177868, intron 9 of 31) intron (NM_177868, intron 9 of 31) -24066 NR_040672 545691 Mm.332015 NR_040672 ENSMUSG00000085424 Fhad1os1 Gm13037|OTTMUSG00000010113 forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 1 ncRNA common_peak1_29_331_-0.966382998749222_7.89184793197231_11.737739737898 chr9 65532327 65532960 + 11.737739737898 NA Intergenic B3|SINE|B2 47444 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak2_161_1748_-0.379360179742418_10.5826344840504_11.7356031152855 chr9 21615173 21617674 + 11.7356031152855 NA intron (NM_011417, intron 1 of 33) CpG 254 NM_001174078 20586 Mm.286593 NM_011417 ENSMUSG00000032187 Smarca4 Brg1|HP1-BP72|SNF2beta|SW1/SNF|b2b508.1Clo|b2b692Clo SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding common_peak1_152_1644_-0.392066575341863_10.4878385809517_11.7325405719792 chr9 109931172 109933063 + 11.7325405719792 NA intron (NM_008633, intron 1 of 18) CpG 343 NM_008633 17758 Mm.217318 NM_008633 ENSMUSG00000032479 Map4 AA407148|MAP-4|Mtap-4|Mtap4 microtubule-associated protein 4 protein-coding common_peak1_37_98_1.19761989450364_7.22816656733143_11.7317112690272 chr16 92777665 92778404 + 11.7317112690272 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 48040 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_30_66_1.40059301427653_6.76638569759604_11.7301623494246 chr16 49876442 49877014 + 11.7301623494246 NA intron (NM_010581, intron 3 of 9) MLTR11A|LTR|ERVK 21074 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_111_581_0.554914029482354_9.46233235764946_11.7236890750903 chr15 38077616 38078927 + 11.7236890750903 NA intron (NM_001081359, intron 1 of 58) CpG 583 NM_001112721 70790 Mm.476840 NM_027553 ENSMUSG00000037487 Ubr5 Edd|Edd1 ubiquitin protein ligase E3 component n-recognin 5 protein-coding unique_peak1_15_13_2.48889834106756_5.05180409259139_11.7211132728929 chr4 40818220 40818586 + 11.7211132728929 NA intron (NM_022305, intron 2 of 5) intron (NM_022305, intron 2 of 5) 31735 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA common_peak1_42_123_1.09153085986708_7.49996174032041_11.7172602559872 chr4 119877794 119878687 + 11.7172602559872 NA intron (NM_010657, intron 1 of 8) intron (NM_010657, intron 1 of 8) 63562 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding unique_peak2_16_207_-1.29690345716692_7.05198798955763_11.7164663019051 chrX 75031536 75032754 + 11.7164663019051 NA intron (NM_181584, intron 2 of 9) MT2A|LTR|ERVL 52760 NM_181584 210710 Mm.267056 NM_181584 ENSMUSG00000032750 Gab3 5930433H21Rik growth factor receptor bound protein 2-associated protein 3 protein-coding unique_peak2_8_131_-1.76632106867214_6.16123358502238_11.7138720291727 chr17 51815683 51816796 + 11.7138720291727 NA intron (NM_001163632, intron 1 of 10) intron (NM_001163632, intron 1 of 10) -4185 NM_001163630 20230 Mm.311655 NM_009122 ENSMUSG00000023927 Satb1 2610306G12Rik|AW413156 special AT-rich sequence binding protein 1 protein-coding common_peak2_210_1443_0.364744312251792_10.6782271830131_11.7118954357913 chr12 69536860 69540023 + 11.7118954357913 NA Intergenic Intergenic 44587 NM_001033236 207965 Mm.102487 NM_001033236 ENSMUSG00000049882 Vcpkmt Gm71|Mettl21d|Mettl221d|VCP-KMT valosin containing protein lysine (K) methyltransferase protein-coding common_peak1_161_995_0.432952462111153_10.1764781631237_11.7115512868269 chr6 115808005 115809369 + 11.7115512868269 NA promoter-TSS (NR_028546) promoter-TSS (NR_028546) 56 NM_172086 19951 Mm.104368 NM_172086 ENSMUSG00000057841 Rpl32 AU020185|rpL32-3A ribosomal protein L32 protein-coding common_peak1_175_1910_-0.360477386724437_10.7198733696152_11.7108216820782 chr16 55837398 55839448 + 11.7108216820782 NA intron (NM_030612, intron 1 of 13) intron (NM_030612, intron 1 of 13) 218 NM_030612 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak2_150_899_0.454739193768514_10.0411507881013_11.7101059061142 chr5 150592367 150595065 + 11.7101059061142 NA intron (NM_133898, intron 1 of 4) CpG 809 NM_133898 100637 Mm.279932 NM_133898 ENSMUSG00000041132 N4bp2l1 2410024N18Rik|AI428195|B230342M21Rik NEDD4 binding protein 2-like 1 protein-coding unique_peak1_11_4_3.46523506201838_4.05454562589655_11.7097189404476-2 chr18 73986570 73986879 + 11.7097189404476 NA intron (NM_172632, intron 1 of 5) intron (NM_172632, intron 1 of 5) -31183 NR_045390 77855 Mm.410760 NR_045390 ENSMUSG00000090263 D730045A05Rik - RIKEN cDNA D730045A05 gene ncRNA unique_peak1_11_4_3.46523506201838_4.05454562589655_11.7097189404476 chr16 55848716 55849071 + 11.7097189404476 NA intron (NM_001134457, intron 5 of 5) B4|SINE|B4 -10252 NM_001159395 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak1_28_321_-0.98225356360205_7.83979009631359_11.7090877809443 chr14 65071155 65071767 + 11.7090877809443 NA intron (NM_018788, intron 3 of 6) intron (NM_018788, intron 3 of 6) 26645 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak1_47_507_-0.748296907493714_8.61453623302531_11.7050746585572 chr11 70765596 70766528 + 11.7050746585572 NA intron (NM_177565, intron 1 of 1) intron (NM_177565, intron 1 of 1) 1615 NM_177565 193043 Mm.40966 NM_177565 ENSMUSG00000043602 Zfp3 AI854635|B230309J24|Fnp-1|Zfp-3 zinc finger protein 3 protein-coding common_peak1_36_399_-0.864072538563315_8.21181992049307_11.7032607281132 chr13 114914343 114914999 + 11.7032607281132 NA intron (NM_008396, intron 1 of 29) intron (NM_008396, intron 1 of 29) 17370 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak2_36_399_-0.864072538563315_8.21181992049307_11.7032607281132 chr8 25993443 25994624 + 11.7032607281132 NA promoter-TSS (NM_029037) promoter-TSS (NM_029037) 88 NM_029037 74653 Mm.17631 NM_029037 ENSMUSG00000037251 Pomk 4930444A02Rik|Sgk196 protein-O-mannose kinase protein-coding common_peak2_67_269_0.779945286296051_8.46678824019886_11.702509703528 chr8 25131172 25133313 + 11.702509703528 NA Intergenic Intergenic 26991 NR_106187 102467006 NR_106187 ENSMUSG00000099142 Mir8108 Gm27484|mmu-mir-8108 microRNA 8108 ncRNA common_peak2_279_3183_-0.275341972461046_11.4989536343131_11.6985873265356 chr3 101284763 101289099 + 11.6985873265356 NA intron (NM_013486, intron 2 of 4) intron (NM_013486, intron 2 of 4) 1008 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding common_peak1_92_975_-0.519920616675297_9.67077702922524_11.6954757985827 chr9 66158105 66159604 + 11.6954757985827 NA intron (NM_010019, intron 1 of 11) intron (NM_010019, intron 1 of 11) 628 NM_010019 13143 Mm.304472 NM_010019 ENSMUSG00000032380 Dapk2 - death-associated protein kinase 2 protein-coding common_peak2_132_749_0.493153527279118_9.7973235490228_11.6947939766945 chr15 6567783 6570374 + 11.6947939766945 NA Intergenic Intergenic -10769 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_31_350_-0.932461645993037_7.98909639730804_11.6943113833319 chr6 83507073 83507754 + 11.6943113833319 NA promoter-TSS (NM_013764) promoter-TSS (NM_013764) -444 NM_001162521 27369 Mm.42234 NM_013764 ENSMUSG00000014554 Dguok dGK|dGK1|dGK2|dGK3 deoxyguanosine kinase protein-coding common_peak1_44_477_-0.774688170416116_8.51352272277269_11.6940688341899 chr11 60352110 60352996 + 11.6940688341899 NA promoter-TSS (NM_029044) promoter-TSS (NM_029044) 352 NM_153080 216810 Mm.218875 NM_153080 ENSMUSG00000000538 Tom1l2 2900016I08Rik|A730055F12Rik|AU042072|Srebf1 target of myb1-like 2 (chicken) protein-coding unique_peak2_14_188_-1.38019830280972_6.87214327281621_11.6909308990367 chr17 30532724 30533657 + 11.6909308990367 NA intron (NM_172618, intron 1 of 11) intron (NM_172618, intron 1 of 11) 43097 NM_172618 224671 Mm.41220 NM_027060 ENSMUSG00000062202 Btbd9 1700023F20Rik|4930402L05|AI464421 BTB (POZ) domain containing 9 protein-coding common_peak1_14_188_-1.38019830280972_6.87214327281621_11.6909308990367 chr11 83531776 83532190 + 11.6909308990367 NA Intergenic Intergenic -1465 NM_013653 20304 Mm.284248 NM_013653 ENSMUSG00000035042 Ccl5 MuRantes|RANTES|SISd|Scya5|TCP228 chemokine (C-C motif) ligand 5 protein-coding common_peak1_244_1775_0.3305659574389_10.9596988450696_11.6905824650167 chr16 32913608 32915083 + 11.6905824650167 NA exon (NM_001081255, exon 1 of 21) exon (NM_001081255, exon 1 of 21) 245 NM_001310672 70144 Mm.491178 NM_001081255 ENSMUSG00000022801 Lrch3 2210409B11Rik|AW215594|Gm1742 leucine-rich repeats and calponin homology (CH) domain containing 3 protein-coding common_peak1_203_2243_-0.330961561108625_10.9663761800545_11.6862732235311 chr15 81871466 81873007 + 11.6862732235311 NA promoter-TSS (NM_026737) promoter-TSS (NM_026737) -227 NM_080633 11429 Mm.154581 NM_080633 ENSMUSG00000022477 Aco2 Aco-2|Aco3|D10Wsu183e aconitase 2, mitochondrial protein-coding common_peak2_201_1359_0.374069568654109_10.5964257204648_11.6852349179594 chr1 34471952 34474145 + 11.6852349179594 NA intron (NM_011206, intron 13 of 14) intron (NM_011206, intron 13 of 14) 13302 NM_011206 19253 Mm.361 NM_011206 ENSMUSG00000026126 Ptpn18 FLP1|HSCF|PTP-HSCF|PTP-K1|Ptpk1 protein tyrosine phosphatase, non-receptor type 18 protein-coding common_peak2_110_574_0.556500021532958_9.44566815659822_11.6849281820275 chr5 73208574 73211579 + 11.6849281820275 NA intron (NM_028194, intron 2 of 62) intron (NM_028194, intron 2 of 62) 46542 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak2_49_161_0.972777500438117_7.82623875310368_11.6844771893128 chr12 24592993 24593936 + 11.6844771893128 NA intron (NM_145890, intron 6 of 13) intron (NM_145890, intron 6 of 13) 12745 NM_145890 195733 Mm.263068 NM_145890 ENSMUSG00000020656 Grhl1 LBP-32|MGR|Tcfcp2l2 grainyhead-like 1 (Drosophila) protein-coding common_peak1_17_216_-1.25686587057181_7.13311829715857_11.6805343428306 chr14 79330897 79331311 + 11.6805343428306 NA Intergenic L2c|LINE|L2 -29469 NM_025427 66214 Mm.29811 NM_025427 ENSMUSG00000022018 Rgcc 1190002H23Rik|Rgc-32|Rgc32 regulator of cell cycle protein-coding common_peak1_23_38_1.72837324922985_6.14958884347717_11.6772378899443 chr6 116071738 116072161 + 11.6772378899443 NA intron (NM_177412, intron 3 of 5) intron (NM_177412, intron 3 of 5) -76944 NM_026376 67784 Mm.3085 NM_026376 ENSMUSG00000030123 Plxnd1 6230425C21Rik|b2b1863Clo|b2b553Clo plexin D1 protein-coding common_peak2_120_652_0.525627663089017_9.61375301309094_11.6770409582233 chrX 142680417 142682762 + 11.6770409582233 NA promoter-TSS (NM_001199360) promoter-TSS (NM_001199360) -137 NM_001199360 209497 Mm.249648 NM_177592 ENSMUSG00000047045 Tmem164 AI316850|AI852450|AW547186|F730011B02 transmembrane protein 164 protein-coding common_peak1_174_1898_-0.361472888747643_10.7102877457757_11.6766813220081 chr8 91081199 91083252 + 11.6766813220081 NA intron (NM_001282000, intron 4 of 20) intron (NM_001282000, intron 4 of 20) 12168 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 retinoblastoma-like 2 protein-coding common_peak1_62_659_-0.644713054294034_9.0439656870988_11.6762226681782 chr10 67663241 67664159 + 11.6762226681782 NA Intergenic Intergenic -114745 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak2_97_476_0.60564309209153_9.20066700205128_11.6748107715934 chr4 82858501 82860241 + 11.6748107715934 NA intron (NM_026647, intron 1 of 8) CpG 290 NM_026647 68268 Mm.32047 NM_026647 ENSMUSG00000028403 Zdhhc21 9130404H11Rik|AL024349|D130004H04Rik|dep zinc finger, DHHC domain containing 21 protein-coding common_peak2_70_742_-0.604058854691578_9.23518897319281_11.6730213280624 chr5 146230513 146232174 + 11.6730213280624 NA promoter-TSS (NM_153599) promoter-TSS (NM_153599) -332 NM_153599 264064 Mm.260576 NM_153599 ENSMUSG00000029635 Cdk8 - cyclin-dependent kinase 8 protein-coding common_peak1_40_113_1.12855325090068_7.39716663961508_11.6728874334839 chr8 25652647 25653298 + 11.6728874334839 NA intron (NM_001081269, intron 3 of 22) intron (NM_001081269, intron 3 of 22) 12395 NM_001081269 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Whsc1l1 6720429E03|A530023P05|AI528490|NSD3|WHISTLE Wolf-Hirschhorn syndrome candidate 1-like 1 (human) protein-coding common_peak1_66_700_-0.6227269338609_9.14190716708017_11.6722966929999 chr11 116432674 116433753 + 11.6722966929999 NA promoter-TSS (NM_176902) promoter-TSS (NM_176902) -881 NM_176902 319370 Mm.258466 NM_176902 ENSMUSG00000050628 Ubald2 1110014K08Rik|D030012E24Rik|Fam100b UBA-like domain containing 2 protein-coding common_peak1_149_891_0.45586211955572_10.0288309596982_11.6700980799967 chr1 43091447 43093176 + 11.6700980799967 NA intron (NM_001013025, intron 2 of 12) CpG 6311 NM_001013025 73122 Mm.246069 NM_001013025 ENSMUSG00000070939 Tgfbrap1 3110018K12Rik|AU024090|AU042859|AW742551|Trap1 transforming growth factor, beta receptor associated protein 1 protein-coding common_peak1_68_721_-0.613259706640376_9.18922517356698_11.6697147420732 chr11 101660720 101661734 + 11.6697147420732 NA Intergenic Intergenic -4314 NM_025404 80981 Mm.266840 NM_025404 ENSMUSG00000034936 Arl4d 1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5 ADP-ribosylation factor-like 4D protein-coding common_peak1_68_721_-0.613259706640376_9.18922517356698_11.6697147420732-2 chr3 97767305 97768510 + 11.6697147420732 NA non-coding (NR_110360, exon 1 of 17) non-coding (NR_110360, exon 1 of 17) 107 NR_110360 83679 Mm.129840 NM_031401 ENSMUSG00000038170 Pde4dip 4732458A06Rik|9430063L05Rik|C87016|D130016K21Rik|D3Bwg1078e|Usmg4|mKIAA0454 phosphodiesterase 4D interacting protein (myomegalin) protein-coding common_peak1_21_31_1.85979774269395_5.92989887134698_11.6661304094724 chr4 128729423 128729867 + 11.6661304094724 NA intron (NM_001195083, intron 1 of 6) intron (NM_001195083, intron 1 of 6) 2074 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic-like 2 (Drosophila) protein-coding unique_peak1_21_31_1.85979774269395_5.92989887134698_11.6661304094724 chr12 99380698 99381218 + 11.6661304094724 NA intron (NM_183186, intron 2 of 5) Lx4A|LINE|L1 69116 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak1_21_31_1.85979774269395_5.92989887134698_11.6661304094724-2 chr9 61683909 61684417 + 11.6661304094724 NA Intergenic Intergenic 230347 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_32_75_1.32939243421729_6.91262373055223_11.6634613971126 chr9 121380736 121381327 + 11.6634613971126 NA intron (NM_175114, intron 1 of 15) MER21B|LTR|ERVL 14073 NM_175114 67095 Mm.491112 NM_175114 ENSMUSG00000032536 Trak1 2310001H13Rik|AI413908|AI467545|hyrt|mKIAA1042 trafficking protein, kinesin binding 1 protein-coding common_peak2_109_566_0.560698404630044_9.42755412725725_11.6629167979879 chr14 47373392 47375654 + 11.6629167979879 NA intron (NM_001145953, intron 1 of 5) intron (NM_001145953, intron 1 of 5) 663 NM_001145953 16854 Mm.248615 NM_010705 ENSMUSG00000050335 Lgals3 GBP|L-34|Mac-2|gal3 lectin, galactose binding, soluble 3 protein-coding common_peak1_79_836_-0.564724962546855_9.42672133127692_11.6629167979879 chr8 54445727 54447177 + 11.6629167979879 NA Intergenic Intergenic 83546 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak2_129_725_0.499701093523502_9.7536762847575_11.6617363275611 chr13 73603146 73605332 + 11.6617363275611 NA exon (NM_146047, exon 1 of 17) exon (NM_146047, exon 1 of 17) 237 NM_146047 218335 Mm.30099 NM_146047 ENSMUSG00000021610 Clptm1l C130052I12Rik|Crr9 CLPTM1-like protein-coding common_peak1_18_225_-1.2198147590183_7.21027158290604_11.6610227122906 chr11 69323239 69323682 + 11.6610227122906 NA promoter-TSS (NM_001024206) promoter-TSS (NM_001024206) 413 NM_172560 216846 Mm.28774 NM_172560 ENSMUSG00000032782 Cntrob 9830165K03Rik|Lip8|Nip2 centrobin, centrosomal BRCA2 interacting protein protein-coding common_peak1_37_408_-0.848980518358503_8.2514667737625_11.6609778053976 chr9 115310594 115311197 + 11.6609778053976 NA promoter-TSS (NM_024222) promoter-TSS (NM_024222) -474 NM_024222 68292 Mm.296158 NM_024222 ENSMUSG00000032437 Stt3b 1300006C19Rik|Simp STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) protein-coding common_peak1_175_1909_-0.359722246670092_10.7194957995881_11.6600314925047 chr1 171680975 171682818 + 11.6600314925047 NA promoter-TSS (NM_007649) promoter-TSS (NM_007649) -159 NM_007649 12506 Mm.1738 NM_007649 ENSMUSG00000015355 Cd48 AI449234|AW610730|BCM1|BLAST|BLAST-1|BLAST1|Bcm-1|MEM-102|SLAMF2|Sgp-60 CD48 antigen protein-coding common_peak1_125_1336_-0.436562278955215_10.1665026106157_11.6592777244279 chr4 59243765 59246014 + 11.6592777244279 NA Intergenic Intergenic -15162 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_38_103_1.17250373146677_7.28669158387448_11.6556067193908 chr8 12756683 12757677 + 11.6556067193908 NA non-coding (NR_121603, exon 1 of 30) non-coding (NR_121603, exon 1 of 30) 164 NM_001293667 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding common_peak1_19_234_-1.18538271893422_7.28382558709789_11.6556067193908 chr11 120729077 120729492 + 11.6556067193908 NA TTS (NM_007621) TTS (NM_007621) -2003 NM_026428 67880 Mm.231091 NM_026428 ENSMUSG00000039450 Dcxr 0610038K04Rik|1810027P18Rik|XR dicarbonyl L-xylulose reductase protein-coding unique_peak2_19_234_-1.18538271893422_7.28382558709789_11.6556067193908 chr6 47650655 47652007 + 11.6556067193908 NA Intergenic CpG 3763 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_238_1716_0.335430190090444_10.9133894190474_11.6537677844361 chr2 35494645 35497328 + 11.6537677844361 NA Intergenic Intergenic -34537 NM_001145821 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak2_57_207_0.874835907557833_8.13785767192001_11.6510769553083 chr7 55793565 55794918 + 11.6510769553083 NA promoter-TSS (NM_146190) promoter-TSS (NM_146190) 93 NM_146190 233276 Mm.284306 NM_146190 ENSMUSG00000033790 Tubgcp5 B130010C12Rik|GCP5|mKIAA1899 tubulin, gamma complex associated protein 5 protein-coding common_peak2_115_1225_-0.4578553268055_10.030815600288_11.6484479336578 chr7 45458396 45461437 + 11.6484479336578 NA promoter-TSS (NM_010240) promoter-TSS (NM_010240) -30 NM_010240 14325 Mm.30357 NM_010240 ENSMUSG00000050708 Ftl1 Ftl|Ftl-1|L-ferritin ferritin light polypeptide 1 protein-coding common_peak2_34_84_1.27205477838583_7.04541832533062_11.6482237315399 chr4 35223404 35224132 + 11.6482237315399 NA intron (NM_001081343, intron 1 of 10) intron (NM_001081343, intron 1 of 10) 2112 NM_001081343 73205 Mm.331544 NM_001081343 ENSMUSG00000028300 3110043O21Rik AI840585 RIKEN cDNA 3110043O21 gene protein-coding common_peak1_243_1766_0.330657748868067_10.9524151989856_11.6479801333747 chr14 18237954 18239638 + 11.6479801333747 NA intron (NM_011584, intron 1 of 7) CpG 310 NM_011584 353187 Mm.26587 NM_011584 ENSMUSG00000021775 Nr1d2 RVR|Rev-erb nuclear receptor subfamily 1, group D, member 2 protein-coding common_peak2_154_935_0.444423072029222_10.092576255598_11.6426614943516 chr5 124111235 124113136 + 11.6426614943516 NA promoter-TSS (NM_025671) promoter-TSS (NM_025671) -153 NM_025671 66627 Mm.7050 NM_025671 ENSMUSG00000023707 Ogfod2 1300006G11Rik|5730405M13Rik|AU041636|AW552395 2-oxoglutarate and iron-dependent oxygenase domain containing 2 protein-coding common_peak2_77_815_-0.572869581177278_9.38599055138286_11.637811190408 chr7 51721043 51724021 + 11.637811190408 NA Intergenic Intergenic 100702 NM_080853 140919 Mm.256618 NM_080853 ENSMUSG00000030500 Slc17a6 2900073D12Rik|DNPI|VGLUT2 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 protein-coding common_peak2_73_308_0.734932934493392_8.63892949515107_11.6317162592437 chr2 128196213 128197561 + 11.6317162592437 NA Intergenic Intergenic 69312 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak1_74_315_0.726368960112564_8.66696522823338_11.6298864712172-2 chr9 70847265 70848654 + 11.6298864712172 NA intron (NM_008280, intron 1 of 8) intron (NM_008280, intron 1 of 8) 86849 NM_008280 15450 Mm.390187 NM_008280 ENSMUSG00000032207 Lipc AI256194|HL|Hpl lipase, hepatic protein-coding common_peak1_74_315_0.726368960112564_8.66696522823338_11.6298864712172 chr10 128175951 128176762 + 11.6298864712172 NA exon (NM_019711, exon 1 of 13) exon (NM_019711, exon 1 of 13) 212 NM_019711 56516 Mm.42247 NM_019711 ENSMUSG00000040043 Rbms2 2610315E04Rik|Scr3 RNA binding motif, single stranded interacting protein 2 protein-coding common_peak1_13_178_-1.42386333843269_6.77188410804791_11.6294604559673 chr3 103866334 103866746 + 11.6294604559673 NA intron (NR_104070, intron 3 of 22) intron (NR_104070, intron 3 of 22) 6263 NM_008979 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding common_peak1_390_3345_0.243971316649587_11.8302073883631_11.627714282642 chr14 102980456 102983607 + 11.627714282642 NA TTS (NR_039592) TTS (NR_039592) 601 NR_039592 100628599 NR_039592 ENSMUSG00000092901 Mir5130 mir-5130|mmu-mir-5130|mu-mir-5130 microRNA 5130 ncRNA common_peak2_43_129_1.06404224085185_7.55438893345438_11.6219793621324 chr1 106618793 106619812 + 11.6219793621324 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -72671 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_599_7562_-0.174756261730959_12.7973647727142_11.6212048985863 chr10 61261505 61265722 + 11.6212048985863 NA intron (NM_001081127, intron 2 of 21) intron (NM_001081127, intron 2 of 21) 9825 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak1_34_378_-0.884608323647559_8.12374987634731_11.6181918981609 chr5 138257039 138257762 + 11.6181918981609 NA intron (NM_001081108, intron 2 of 3) B4A|SINE|B4 1918 NM_001081108 66096 Mm.206901 NM_001081108 ENSMUSG00000050552 Lamtor4 0910001L09Rik|AV006840 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 protein-coding common_peak2_50_537_-0.723791585429167_8.70956656984204_11.6177285942637 chr7 90006129 90008431 + 11.6177285942637 NA Intergenic Intergenic -21879 NR_110365 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15 RIKEN cDNA E230029C05 gene ncRNA common_peak2_102_514_0.583119261706159_9.29998825292366_11.6173178378743 chr1 21270212 21272649 + 11.6173178378743 NA Intergenic Intergenic 26882 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo common_peak1_15_197_-1.33310335695444_6.96280494160239_11.6167889147015 chr2 32519944 32520306 + 11.6167889147015 NA Intergenic L1M3|LINE|L1 -15234 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding unique_peak2_15_197_-1.33310335695444_6.96280494160239_11.6167889147015 chr1 142588809 142589910 + 11.6167889147015 NA Intergenic IAPEz-int|LTR|ERVK -1051338 NM_020025 26878 Mm.285580 NM_020025 ENSMUSG00000033849 B3galt2 - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 protein-coding unique_peak2_21_253_-1.12888694407821_7.42424121473306_11.6149878907843 chr3 96715386 96716894 + 11.6149878907843 NA intron (NM_028925, intron 9 of 14) intron (NM_028925, intron 9 of 14) -7580 NM_030094 78373 Mm.423186 NM_030094 ENSMUSG00000028100 Nudt17 2410015C20Rik nudix (nucleoside diphosphate linked moiety X)-type motif 17 protein-coding common_peak2_175_1120_0.409064113447593_10.3351026195292_11.6144186660279 chr8 124342871 124347440 + 11.6144186660279 NA 3' UTR (NM_139272, exon 16 of 16) 3' UTR (NM_139272, exon 16 of 16) 88781 NM_171824 209966 Mm.234233 NM_171824 ENSMUSG00000050751 Pgbd5 2900019M05Rik|AI854313 piggyBac transposable element derived 5 protein-coding common_peak1_20_28_1.91949364867093_5.81772781946303_11.6134757189097 chr12 25387545 25388028 + 11.6134757189097 NA Intergenic Intergenic 258612 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_46_497_-0.756870844642064_8.58156650974705_11.6130626566825 chr4 155991924 155992732 + 11.6130626566825 NA promoter-TSS (NM_001302469) promoter-TSS (NM_001302469) 350 NM_080445 117592 Mm.440185 NM_080445 ENSMUSG00000050796 B3galt6 BB129894|GalTII UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6 protein-coding common_peak2_475_4345_0.21482453343107_12.1928847258968_11.6117752963023 chr1 36260458 36267574 + 11.6117752963023 NA TTS (NM_153408) TTS (NM_153408) 9409 NM_153408 214854 Mm.389110 NM_153408 ENSMUSG00000047180 Neurl3 2010300P06Rik|Lincr neuralized E3 ubiquitin protein ligase 3 protein-coding common_peak1_142_833_0.468286773137764_9.93804696001354_11.6112589825946 chr6 124729388 124731414 + 11.6112589825946 NA intron (NM_013545, intron 3 of 15) intron (NM_013545, intron 3 of 15) 2753 NM_013545 15170 Mm.271799 NM_013545 ENSMUSG00000004266 Ptpn6 70Z-SHP|Hcph|PTPTY-42|Ptp1C|SH-PTP1|SHP-1|hcp|me protein tyrosine phosphatase, non-receptor type 6 protein-coding common_peak2_142_833_0.468286773137764_9.93804696001354_11.6112589825946 chr1 181143330 181145207 + 11.6112589825946 NA promoter-TSS (NM_026171) promoter-TSS (NM_026171) -64 NM_026171 67459 Mm.263464 NM_026171 ENSMUSG00000026516 Nvl 1200009I24Rik nuclear VCP-like protein-coding common_peak1_25_292_-1.03933560978132_7.67508904953159_11.6110973146705 chr13 54071775 54072391 + 11.6110973146705 NA intron (NM_027324, intron 1 of 10) CpG 238 NM_027324 14057 Mm.134191 NM_027324 ENSMUSG00000021474 Sfxn1 2810002O05Rik|A930015P12Rik|f sideroflexin 1 protein-coding common_peak1_123_677_0.514765363970675_9.66252414512168_11.6091698983023 chr7 128132047 128134045 + 11.6091698983023 NA exon (NM_021334, exon 6 of 30) exon (NM_021334, exon 6 of 30) 3478 NM_021334 16411 Mm.22378 NM_021334 ENSMUSG00000030789 Itgax AI449405|Cd11c|Cr4|N418 integrin alpha X protein-coding common_peak2_132_1414_-0.422686025056883_10.2552433251908_11.6082073288786 chr11 78555374 78558375 + 11.6082073288786 NA Intergenic B2_Mm1a|SINE|B2 -6139 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e transmembrane protein 97 protein-coding common_peak2_43_467_-0.783954665703098_8.47838738673186_11.6076819392466 chr12 113097697 113099393 + 11.6076819392466 NA intron (NM_054081, intron 1 of 19) C-rich|Low_complexity|Low_complexity 267 NM_054081 116870 Mm.212577 NM_054081 ENSMUSG00000021144 Mta1 - metastasis associated 1 protein-coding common_peak2_430_3809_0.228980420767563_12.0100654927645_11.6068582694223 chr15 76315222 76319430 + 11.6068582694223 NA Intergenic L1M4b|LINE|L1 -10071 NM_175399 109075 Mm.322752 NM_175399 ENSMUSG00000034259 Exosc4 1110039I09Rik|1500001N04Rik|Rrp41 exosome component 4 protein-coding common_peak2_71_751_-0.596678867432258_9.25624941796151_11.6053799625956 chr19 37553345 37554986 + 11.6053799625956 NA intron (NM_175353, intron 1 of 21) intron (NM_175353, intron 1 of 21) 3747 NM_175353 107371 Mm.24865 NM_175353 ENSMUSG00000053799 Exoc6 4833405E05Rik|AW413330|C430002C19|Sec15|Sec15l1|hbd|msec15 exocyst complex component 6 protein-coding common_peak1_118_1257_-0.449843836639644_10.0719942885595_11.6018713501329 chr11 69681269 69682742 + 11.6018713501329 NA promoter-TSS (NM_030702) promoter-TSS (NM_030702) -35 NM_030702 80886 Mm.284592 NM_030702 ENSMUSG00000005204 Senp3 AA408656|Smt3ip|Smt3ip1 SUMO/sentrin specific peptidase 3 protein-coding common_peak1_101_506_0.588441151310471_9.28006251265858_11.6017006833409 chr17 26560670 26562000 + 11.6017006833409 NA promoter-TSS (NM_026170) promoter-TSS (NM_026170) -177 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_196_2157_-0.336372532862717_10.9072928830567_11.5996304972078 chr8 94363499 94366390 + 11.5996304972078 NA intron (NM_001205311, intron 24 of 24) intron (NM_001205311, intron 24 of 24) -21556 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak1_125_1335_-0.435482821335913_10.1659628818061_11.5987465200155 chr2 32450662 32452079 + 11.5987465200155 NA promoter-TSS (NM_146118) promoter-TSS (NM_146118) 100 NM_001164357 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak2_264_1979_0.312562637354462_11.1075660336442_11.5963715929757 chr17 46554615 46557266 + 11.5963715929757 NA 5' UTR (NM_020493, exon 1 of 7) 5' UTR (NM_020493, exon 1 of 7) 222 NM_020493 20807 Mm.45044 NM_020493 ENSMUSG00000015605 Srf AW049942|AW240594 serum response factor protein-coding common_peak1_51_547_-0.715998527133239_8.74003281939391_11.5950682840659 chr12 100894866 100895611 + 11.5950682840659 NA intron (NM_175493, intron 1 of 2) intron (NM_175493, intron 1 of 2) 4286 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding common_peak1_127_1357_-0.431177567560496_10.1916789804645_11.5948455644816 chr18 73834673 73836602 + 11.5948455644816 NA Intergenic Intergenic -20245 NM_145494 107029 Mm.36817 NM_145494 ENSMUSG00000024556 Me2 AW120568|D030040L20Rik|NAD-ME malic enzyme 2, NAD(+)-dependent, mitochondrial protein-coding common_peak1_44_476_-0.771666818440879_8.51201204678507_11.5932104502212 chr9 114752285 114753001 + 11.5932104502212 NA Intergenic MT2A|LTR|ERVL 21440 NM_026036 67213 Mm.28858 NM_026036 ENSMUSG00000032434 Cmtm6 2810051A14Rik|AA536733|Cklfsf6 CKLF-like MARVEL transmembrane domain containing 6 protein-coding common_peak1_110_575_0.553993165922384_9.4469215844035_11.5928069267984 chr4 46489182 46490347 + 11.5928069267984 NA intron (NM_053179, intron 1 of 5) intron (NM_053179, intron 1 of 5) 435 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding common_peak1_62_658_-0.642525495056269_9.04287190747992_11.590261690667 chr2 163642183 163643294 + 11.590261690667 NA intron (NM_012032, intron 1 of 9) RLTR4_Mm|LTR|ERV1 -2112 NR_028113 68386 Mm.410649 NR_028113 ENSMUSG00000058812 0610039K10Rik - RIKEN cDNA 0610039K10 gene ncRNA common_peak1_107_1136_-0.475584349679941_9.91322436405228_11.589039334324 chrX 48453269 48454837 + 11.589039334324 NA intron (NM_019680, intron 1 of 8) CpG 9079 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak2_66_699_-0.620667411682605_9.14087740599103_11.588872939167 chr3 152906742 152909119 + 11.588872939167 NA intron (NM_012028, intron 2 of 4) intron (NM_012028, intron 2 of 4) 74277 NM_012028 26938 Mm.40915 NM_012028 ENSMUSG00000039037 St6galnac5 AI851940|Siat7e ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding common_peak2_107_552_0.564296518977599_9.39328392972351_11.5875203607003 chr6 134699669 134701730 + 11.5875203607003 NA intron (NM_026371, intron 3 of 3) intron (NM_026371, intron 3 of 3) 59759 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding unique_peak2_5_102_-2.12594968146383_5.6235256864513_11.5864080853068 chr15 89765285 89765931 + 11.5864080853068 NA Intergenic Intergenic 76252 NM_018803 54526 Mm.261601 NM_018803 ENSMUSG00000063260 Syt10 - synaptotagmin X protein-coding unique_peak2_5_102_-2.12594968146383_5.6235256864513_11.5864080853068-2 chr18 47652869 47653708 + 11.5864080853068 NA intron (NR_033454, intron 1 of 5) IAPEz-int|LTR|ERVK 115553 NR_033454 328953 Mm.246768 NR_033454 Gm5095 A730092B10 predicted gene 5095 ncRNA common_peak2_53_566_-0.698385046916277_8.79801240148409_11.5833490187223 chr10 5194100 5195567 + 11.5833490187223 NA promoter-TSS (NM_001079686) promoter-TSS (NM_001079686) -126 NM_001079686 64009 Mm.331626 NM_022027 ENSMUSG00000096054 Syne1 8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756|myne-1 spectrin repeat containing, nuclear envelope 1 protein-coding unique_peak2_11_158_-1.52571979837862_6.55002305609505_11.583331200623 chr11 85643772 85644864 + 11.583331200623 NA intron (NM_001166642, intron 23 of 24) intron (NM_001166642, intron 23 of 24) 75426 NR_045875 71489 Mm.442482 NR_045875 ENSMUSG00000086199 Bcas3os1 8430403D17Rik breast carcinoma amplified sequence 3, opposite strand 1 ncRNA common_peak2_129_726_0.497715277599658_9.75466919271942_11.5797456848727 chr16 92809092 92812280 + 11.5797456848727 NA intron (NM_001111022, intron 2 of 6) ID_B1|SINE|B4 15388 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_141_1515_-0.406282181137719_10.3629129476022_11.5782402304274 chr1 80744894 80748322 + 11.5782402304274 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 11945 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak2_67_710_-0.616944866272533_9.16523331648315_11.5776696989728 chr14 20378417 20380694 + 11.5776696989728 NA intron (NM_172379, intron 10 of 11) intron (NM_172379, intron 10 of 11) 9355 NM_134081 108671 Mm.2871 NM_134081 ENSMUSG00000021811 Dnajc9 5330419I01Rik|AU020082 DnaJ heat shock protein family (Hsp40) member C9 protein-coding common_peak1_53_184_0.917438417509639_7.99010066927113_11.5769687159116 chr4 59008707 59009968 + 11.5769687159116 NA intron (NM_001033165, intron 1 of 3) intron (NM_001033165, intron 1 of 3) 6144 NM_001033165 72429 Mm.317801 NM_001033165 ENSMUSG00000070972 Dnajc25 2010109C08Rik|2010203O07Rik DnaJ heat shock protein family (Hsp40) member C25 protein-coding unique_peak1_22_35_1.7685358026512_6.05419290276791_11.5766598310798-2 chr14 121931509 121932122 + 11.5766598310798 NA intron (NM_026861, intron 4 of 8) MER21C|LTR|ERVL -16041 NM_182806 110168 Mm.37405 NM_182806 ENSMUSG00000050350 Gpr18 - G protein-coupled receptor 18 protein-coding unique_peak1_22_35_1.7685358026512_6.05419290276791_11.5766598310798 chr1 179832724 179833280 + 11.5766598310798 NA Intergenic L2a|LINE|L2 -28987 NM_026375 226747 Mm.128165 NM_026375 ENSMUSG00000026491 Ahctf1 6230412P20Rik|AV011447|Elys AT hook containing transcription factor 1 protein-coding common_peak2_100_1059_-0.493000355845105_9.80334837152801_11.5761746382331 chrX 73227290 73229405 + 11.5761746382331 NA promoter-TSS (NM_007978) promoter-TSS (NM_007978) 41 NM_007978 14070 Mm.165807 NM_007978 ENSMUSG00000078317 F8a AI852759|DXUcsf1|F8a1 factor 8-associated gene A protein-coding common_peak2_48_516_-0.73714423340425_8.64544835361281_11.5756584557425 chr13 52720905 52722642 + 11.5756584557425 NA Intergenic Intergenic 35432 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak1_41_447_-0.803267967072749_8.40572093852123_11.5752704431782 chr14 27383654 27384351 + 11.5752704431782 NA intron (NM_001289688, intron 3 of 9) intron (NM_001289688, intron 3 of 9) 22613 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_84_888_-0.544397760977278_9.52384072834113_11.5691800498289 chr4 3659291 3661344 + 11.5691800498289 NA intron (NR_040643, intron 3 of 3) intron (NR_040643, intron 3 of 3) 3811 NR_040643 70143 Mm.417835 NR_040643 ENSMUSG00000085394 2210414B05Rik - RIKEN cDNA 2210414B05 gene ncRNA common_peak1_35_387_-0.868615169128104_8.16560525762307_11.5666767664052-2 chr9 66945325 66945977 + 11.5666767664052 NA promoter-TSS (NM_026467) promoter-TSS (NM_026467) -425 NM_001311101 67941 Mm.30120 NM_026467 ENSMUSG00000036781 Rps27l 1810034D23Rik ribosomal protein S27-like protein-coding common_peak1_35_387_-0.868615169128104_8.16560525762307_11.5666767664052 chr6 113326846 113327495 + 11.5666767664052 NA 5' UTR (NM_010957, exon 1 of 7) 5' UTR (NM_010957, exon 1 of 7) 194 NM_010957 18294 Mm.43612 NM_010957 ENSMUSG00000030271 Ogg1 Mmh 8-oxoguanine DNA-glycosylase 1 protein-coding common_peak1_16_206_-1.28995069652515_7.04851160923675_11.5651550207439 chr19 5663813 5664282 + 11.5651550207439 NA promoter-TSS (NM_011379) promoter-TSS (NM_011379) -340 NM_001164480 20469 Mm.3072 NM_011379 ENSMUSG00000056917 Sipa1 Spa1 signal-induced proliferation associated gene 1 protein-coding common_peak1_117_630_0.530642521245632_9.56681745560537_11.56301775236 chr2 73891631 73892746 + 11.56301775236 NA intron (NM_001284376, intron 1 of 14) CpG 451 NM_001284371 11909 Mm.209903 NM_009715 ENSMUSG00000027104 Atf2 Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|Tg(Gzma-Klra1)7Wum|mXBP activating transcription factor 2 protein-coding common_peak2_77_814_-0.571100488324223_9.38510600495633_11.5605452659197 chr8 71285480 71287891 + 11.5605452659197 NA intron (NM_001142323, intron 1 of 38) (TC)n|Simple_repeat|Simple_repeat 13971 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding common_peak1_330_2677_0.270451999337759_11.5221662449932_11.5593543227721 chr19 60789298 60791407 + 11.5593543227721 NA intron (NM_010123, intron 1 of 21) CpG 341 NM_010123 13669 Mm.2238 NM_010123 ENSMUSG00000024991 Eif3a A830012B05Rik|Csma|Eif3|Eif3s10|mKIAA0139 eukaryotic translation initiation factor 3, subunit A protein-coding common_peak1_83_877_-0.547377863364147_9.50438819785328_11.5587511037754 chr17 36021184 36022864 + 11.5587511037754 NA intron (NR_015618, intron 1 of 1) B2_Mm2|SINE|B2 -1464 NM_008207 15042 Mm.439654 NM_008207 ENSMUSG00000053835 H2-T24 H-2T24 histocompatibility 2, T region locus 24 protein-coding common_peak2_114_606_0.541013684716148_9.51605954861376_11.5562000901035 chr1 155054938 155057187 + 11.5562000901035 NA Intergenic RMER10A|LTR|ERVL 43574 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak2_103_522_0.577978730766702_9.31965650163029_11.5550006976862 chr10 41594803 41596453 + 11.5550006976862 NA intron (NM_001303469, intron 3 of 20) intron (NM_001303469, intron 3 of 20) 10967 NM_001303469 75973 Mm.228517 NM_029493 ENSMUSG00000075225 Ccdc162 5033413D22Rik|Ccdc162p|Gm29096|Gm61|Gm6976 coiled-coil domain containing 162 protein-coding common_peak1_116_1234_-0.453217360710894_10.0436866461166_11.5520381736076 chr2 181186516 181187998 + 11.5520381736076 NA promoter-TSS (NM_025598) promoter-TSS (NM_025598) -86 NM_025598 66496 Mm.213943 NM_025598 ENSMUSG00000016344 Ppdpf 0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik pancreatic progenitor cell differentiation and proliferation factor protein-coding common_peak2_126_702_0.504829815101511_9.70979578662329_11.5497892012867 chr4 46488533 46490191 + 11.5497892012867 NA promoter-TSS (NM_053179) promoter-TSS (NM_053179) 33 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding common_peak2_49_526_-0.729031648314473_8.67714332747998_11.5476469639276 chr4 46649795 46651076 + 11.5476469639276 NA promoter-TSS (NM_198664) promoter-TSS (NM_198664) -236 NM_198664 381605 Mm.331595 NM_198664 ENSMUSG00000039813 Tbc1d2 A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1 TBC1 domain family, member 2 protein-coding common_peak2_35_89_1.23944457672935_7.11157538469435_11.541456625068-2 chr8 95067178 95067851 + 11.541456625068 NA intron (NM_001042715, intron 7 of 17) MIRc|SINE|MIR 12411 NM_001042715 330830 Mm.277112 NM_001042715 ENSMUSG00000031786 Drc7 Ccdc135|Gm770|SRG-L|SRG-S dynein regulatory complex subunit 7 protein-coding common_peak2_35_89_1.23944457672935_7.11157538469435_11.541456625068 chr15 12375767 12376442 + 11.541456625068 NA exon (NM_001081064, exon 19 of 24) exon (NM_001081064, exon 19 of 24) 54608 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding common_peak1_73_771_-0.586061074870313_9.29942649983292_11.5380240122414 chr1 164073278 164074434 + 11.5380240122414 NA intron (NM_011346, intron 7 of 8) intron (NM_011346, intron 7 of 8) 11780 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak2_76_329_0.71039932652725_8.72152187750944_11.5379912237173 chr7 127128668 127130884 + 11.5379912237173 NA Intergenic Intergenic -7747 NM_133686 67375 Mm.26928 NM_133686 ENSMUSG00000030674 Qprt 2410027J01Rik|AI647766|QPRTase quinolinate phosphoribosyltransferase protein-coding common_peak2_144_851_0.462059281165052_9.96573926080836_11.5364918312821 chr9 121304170 121307347 + 11.5364918312821 NA Intergenic Intergenic -28586 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding unique_peak1_16_16_2.31607341972383_5.24549955111226_11.5351292138889 chr19 53427284 53427696 + 11.5351292138889 NA Intergenic Intergenic -36917 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding unique_peak1_16_16_2.31607341972383_5.24549955111226_11.5351292138889-2 chr19 61151476 61151871 + 11.5351292138889 NA Intergenic Intergenic -10833 NR_131954 414758 Mm.100056 NM_001001737 ENSMUSG00000074733 Zfp950 5830428H23Rik|AU016073|BC055757|Gm34518|Zfp826|mszf84 zinc finger protein 950 protein-coding common_peak1_127_1356_-0.430114808734618_10.1911476010515_11.5349513839539 chr3 95314757 95316224 + 11.5349513839539 NA intron (NM_029789, intron 1 of 10) CpG 238 NM_029789 76893 Mm.181009 NM_029789 ENSMUSG00000015714 Cers2 0610013I17Rik|AI225939|Lass2|TRH3 ceramide synthase 2 protein-coding common_peak1_30_339_-0.942708731403396_7.938036570436_11.5342275555218 chr1 193207082 193207649 + 11.5342275555218 NA Intergenic B1_Mus1|SINE|Alu -5819 NM_153137 215243 Mm.261259 NM_153137 ENSMUSG00000037318 Traf3ip3 6030423D04Rik|AI115021|T3jam TRAF3 interacting protein 3 protein-coding common_peak2_170_1077_0.414491772950953_10.281387349228_11.5338301539751 chr2 12418238 12420071 + 11.5338301539751 NA intron (NM_024185, intron 1 of 14) CpG 306 NM_024185 66960 Mm.34059 NM_024185 ENSMUSG00000026767 Fam188a 1810041E18Rik|2310047O13Rik|5830410F13Rik|AI447827|AW111958 family with sequence similarity 188, member A protein-coding common_peak1_14_187_-1.37254473026629_6.86831648654449_11.5327076070051 chr1 166388345 166388789 + 11.5327076070051 NA exon (NM_030245, exon 5 of 8) exon (NM_030245, exon 5 of 8) 9400 NM_030245 27878 Mm.100665 NM_030245 ENSMUSG00000026563 Tada1 2900026B15Rik|D1Ertd251e|Staf42|Tada1l transcriptional adaptor 1 protein-coding common_peak1_105_537_0.570891714072845_9.35690821959304_11.5307442208755 chr18 84684818 84685736 + 11.5307442208755 NA intron (NM_023149, intron 1 of 11) CpG 425 NM_023149 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak1_218_1523_0.352806355045592_10.7500503650161_11.5292803070227 chr16 35869365 35872478 + 11.5292803070227 NA intron (NM_001039530, intron 1 of 16) intron (NM_001039530, intron 1 of 16) 461 NM_001039530 547253 Mm.244406 NM_001039530 ENSMUSG00000034422 Parp14 1600029O10Rik|ARTD8|BC021340|CoaSt6|mKIAA1268 poly (ADP-ribose) polymerase family, member 14 protein-coding common_peak2_304_2398_0.284407595631857_11.3704212401094_11.526632081822 chr8 57511760 57513820 + 11.526632081822 NA intron (NM_008252, intron 2 of 4) CpG-14025 947 NM_008252 97165 Mm.276881 NM_008252 ENSMUSG00000054717 Hmgb2 C80539|HMG-2|Hmg2 high mobility group box 2 protein-coding unique_peak2_8_130_-1.75534995085114_6.15574802611188_11.5264016570882 chr6 122259114 122259979 + 11.5264016570882 NA Intergenic Intergenic 23287 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak2_104_1102_-0.481636844914563_9.8663986531341_11.524519199295 chr10 53629167 53631290 + 11.524519199295 NA intron (NM_027830, intron 1 of 13) CpG-1054 211 NM_027830 71567 Mm.278221 NM_027830 ENSMUSG00000058298 Mcm9 9030408O17Rik|Gm235|Mcmdc1 minichromosome maintenance 9 homologous recombination repair factor protein-coding common_peak1_39_109_1.13638682529247_7.3495531261709_11.5225674370095 chrX 53669852 53670612 + 11.5225674370095 NA exon (NM_001018063, exon 1 of 1) exon (NM_001018063, exon 1 of 1) 176 NM_001018063 553127 Mm.328602 NM_001018063 ENSMUSG00000067924 Cxx1b Mart8c CAAX box 1B protein-coding common_peak1_115_1223_-0.45549990580737_10.029637889789_11.5222668870751 chr1 164136274 164137956 + 11.5222668870751 NA exon (NM_011347, exon 9 of 16) exon (NM_011347, exon 9 of 16) -14720 NM_007976 14067 Mm.12900 NM_007976 ENSMUSG00000026579 F5 AI173222|Cf-5|Cf5 coagulation factor V protein-coding common_peak2_143_1537_-0.402317492530091_10.3856810416968_11.5221498262247 chr4 123572320 123573977 + 11.5221498262247 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -43272 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak1_38_416_-0.830960123836802_8.28842351152626_11.516181534094 chr11 51874403 51875166 + 11.516181534094 NA Intergenic Intergenic -17303 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak1_38_416_-0.830960123836802_8.28842351152626_11.516181534094-2 chr2 167975064 167975995 + 11.516181534094 NA exon (NM_011201, exon 8 of 9) exon (NM_011201, exon 8 of 9) 35064 NM_001080708 69553 Mm.68454 NM_001080708 ENSMUSG00000074577 Fam65c 2310033K02Rik|Gm124 family with sequence similarity 65, member C protein-coding unique_peak2_18_224_-1.21341698782015_7.20707269730696_11.5159575325162 chr14 34768460 34770123 + 11.5159575325162 NA Intergenic CpG -50845 NM_008166 14803 Mm.121569 NM_008166 ENSMUSG00000041078 Grid1 GluD1|GluRdelta1 glutamate receptor, ionotropic, delta 1 protein-coding common_peak1_19_233_-1.17923049195263_7.28074947360709_11.5132750794692 chr6 48678733 48679183 + 11.5132750794692 NA TTS (NM_174960) TTS (NM_174960) 2823 NM_174960 317758 Mm.116971 NM_174960 ENSMUSG00000051124 Gimap9 A630002K24|BB145400 GTPase, IMAP family member 9 protein-coding common_peak1_49_162_0.963899349091664_7.83067782877691_11.5128904850488 chr14 121262247 121263283 + 11.5128904850488 NA intron (NM_134082, intron 16 of 26) intron (NM_134082, intron 16 of 26) 116465 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_47_505_-0.742605795415859_8.61169067698638_11.5095366987695 chr4 120569404 120570749 + 11.5095366987695 NA intron (NM_016748, intron 1 of 18) CpG 200 NM_016748 51797 Mm.1815 NM_016748 ENSMUSG00000028633 Ctps Ctps1 cytidine 5'-triphosphate synthase protein-coding common_peak1_47_505_-0.742605795415859_8.61169067698638_11.5095366987695 chr13 114887243 114888002 + 11.5095366987695 NA intron (NM_008396, intron 2 of 29) intron (NM_008396, intron 2 of 29) 44419 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_68_719_-0.609257776082879_9.18722420828824_11.5055424460593 chr17 25248631 25249655 + 11.5055424460593 NA exon (NM_001163270, exon 11 of 34) exon (NM_001163270, exon 11 of 34) -3505 NR_105931 102465583 NR_105931 ENSMUSG00000093202 Mir3547 Gm22410|mmu-mir-3547 microRNA 3547 ncRNA common_peak1_201_1362_0.370890657986601_10.5980151757985_11.5054957985713 chr17 28951704 28953289 + 11.5054957985713 NA promoter-TSS (NM_025888) promoter-TSS (NM_025888) -720 NM_025888 66989 Mm.435 NM_025888 ENSMUSG00000005936 Kctd20 2410004N11Rik|AI451943|AW541186|D17Ertd562e potassium channel tetramerisation domain containing 20 protein-coding common_peak1_59_627_-0.659352005107568_8.96494474633784_11.5050243108642 chr12 75669780 75670588 + 11.5050243108642 NA promoter-TSS (NM_028203) promoter-TSS (NM_028203) -647 NM_028203 72338 Mm.341719 NM_028203 ENSMUSG00000045690 Wdr89 2600001A11Rik WD repeat domain 89 protein-coding common_peak2_283_2177_0.297595929502821_11.2375862034683_11.5048253703303 chr4 101355235 101358347 + 11.5048253703303 NA promoter-TSS (NR_040708) promoter-TSS (NR_040708) -543 NR_040708 77866 Mm.137053 NR_040708 ENSMUSG00000086782 E130102H24Rik - RIKEN cDNA E130102H24 gene ncRNA common_peak2_257_1910_0.316361934616133_11.0582930302855_11.504817159336 chr15 78474906 78485811 + 11.504817159336 NA TTS (NM_008368) TTS (NM_008368) -11724 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak1_62_657_-0.640334613783459_9.04177646684351_11.5045586108413 chr8 123013993 123015222 + 11.5045586108413 NA intron (NR_037865, intron 1 of 13) ID_B1|SINE|B4 27677 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_61_647_-0.646555486963962_9.01657225940264_11.503043892527 chr3 116594182 116595456 + 11.503043892527 NA promoter-TSS (NM_001289568) promoter-TSS (NM_001289568) -139 NM_001289568 72776 Mm.440836 NM_028349 ENSMUSG00000027959 Sass6 2810453L12Rik SAS-6 centriolar assembly protein protein-coding common_peak2_205_1399_0.366949083130768_10.6346856533977_11.5026821946637 chr1 43445184 43448172 + 11.5026821946637 NA intron (NM_010879, intron 1 of 4) intron (NM_010879, intron 1 of 4) 927 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_44_475_-0.768639125743311_8.51049820043629_11.4926892256415 chr13 46775293 46776137 + 11.4926892256415 NA intron (NM_010617, intron 27 of 37) Lx3A|LINE|L1 -47866 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak2_64_678_-0.630353243911836_9.09209114228882_11.4917976103557 chr13 112001202 112003261 + 11.4917976103557 NA Intergenic Intergenic 134295 NR_130345 102636620 Mm.402328 NR_130345 ENSMUSG00000086111 Gm15326 OTTMUSG00000020187 predicted gene 15326 ncRNA common_peak1_53_565_-0.695838364805931_8.79673906042892_11.4910701585575 chr13 21778613 21779366 + 11.4910701585575 NA TTS (NM_020034) TTS (NM_020034) 1636 NM_020034 56702 Mm.221314 NM_020034 ENSMUSG00000058773 Hist1h1b H1.5|H1B|H1f5|H1s-3 histone cluster 1, H1b protein-coding common_peak1_265_1991_0.310510691780635_11.1152572779584_11.4910460377787 chr5 142793656 142795681 + 11.4910460377787 NA intron (NM_001122730, intron 2 of 27) intron (NM_001122730, intron 2 of 27) 22719 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak1_88_929_-0.528068537231206_9.59705263737979_11.4894155023374 chr15 102625128 102626082 + 11.4894155023374 NA promoter-TSS (NM_001310067) promoter-TSS (NM_001310067) -141 NM_001310066 223922 Mm.208714 NM_146065 ENSMUSG00000052414 Atf7 1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik activating transcription factor 7 protein-coding common_peak1_152_920_0.444747947189404_10.069431319686_11.4879130743207 chr17 28007409 28008877 + 11.4879130743207 NA exon (NM_181413, exon 12 of 25) exon (NM_181413, exon 12 of 25) 72441 NM_013687 21463 Mm.29758 NM_013687 ENSMUSG00000062859 Tcp11 D17Ken1|Tcp-11 t-complex protein 11 protein-coding unique_peak2_10_149_-1.59563325898828_6.43100206100174_11.4874911374944 chr15 58649655 58650684 + 11.4874911374944 NA Intergenic ORR1D2|LTR|ERVL-MaLR 173258 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding unique_peak1_26_50_1.5497822248681_6.44731645440555_11.4874911374944-2 chr5 113162757 113163285 + 11.4874911374944 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 292 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding unique_peak1_26_50_1.5497822248681_6.44731645440555_11.4874911374944 chr19 57452843 57453457 + 11.4874911374944 NA exon (NM_029839, exon 1 of 7) exon (NM_029839, exon 1 of 7) 244 NM_028115 72133 Mm.258404 NM_028115 ENSMUSG00000025086 Trub1 2610009I02Rik|9030425C13Rik|AI448235|BB118943|C76870 TruB pseudouridine (psi) synthase family member 1 protein-coding common_peak1_303_2388_0.284622309685982_11.3645022932993_11.4873749140342 chr10 14044454 14047382 + 11.4873749140342 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 79539 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak2_99_1047_-0.494183187028355_9.78633140802327_11.4859977381205 chr10 79668899 79670320 + 11.4859977381205 NA exon (NM_148934, exon 1 of 2) exon (NM_148934, exon 1 of 2) 199 NM_148934 110012 Mm.22623 NM_148934 ENSMUSG00000020308 Tpgs1 AV005629|Gm16517|Gtrgeo22|PGs1 tubulin polyglutamylase complex subunit 1 protein-coding common_peak1_99_1047_-0.494183187028355_9.78633140802327_11.4859977381205 chr17 32965474 32966572 + 11.4859977381205 NA promoter-TSS (NR_033585) promoter-TSS (NR_033585) 192 NM_153063 224691 Mm.328953 NM_153063 ENSMUSG00000053600 Zfp472 KRIM-1|Krim-1A|Krim-1B|Krim1 zinc finger protein 472 protein-coding common_peak2_234_1680_0.336132665068169_10.8831703417703_11.4843104103101 chr13 63562939 63566867 + 11.4843104103101 NA intron (NM_008957, intron 1 of 22) CpG-3956 617 NM_008957 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes patched 1 protein-coding unique_peak2_36_397_-0.856840969332239_8.20820413587753_11.4834120776724 chr8 123202839 123204778 + 11.4834120776724 NA TTS (NM_145606) TTS (NM_145606) 8980 NM_145606 234852 Mm.41596 NM_145606 ENSMUSG00000000743 Chmp1a 2900018H07Rik|Pcoln3 charged multivesicular body protein 1A protein-coding common_peak1_24_281_-1.05353616026241_7.61278327226759_11.4815706951643 chr9 96740819 96741312 + 11.4815706951643 NA intron (NR_015511, intron 2 of 3) intron (NR_015511, intron 2 of 3) -9390 NM_175537 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak2_157_963_0.435822066069711_10.1308003692648_11.4815277202777 chr2 153631750 153633478 + 11.4815277202777 NA exon (NM_133850, exon 1 of 9) exon (NM_133850, exon 1 of 9) 167 NM_001195390 99311 Mm.294478 NM_133850 ENSMUSG00000056941 Commd7 2310010I22Rik|AW060956|mU3 COMM domain containing 7 protein-coding common_peak1_72_303_0.734391512942043_8.61512326991461_11.4812204606332 chr10 60284500 60285714 + 11.4812204606332 NA intron (NM_001146124, intron 1 of 13) intron (NM_001146124, intron 1 of 13) 646 NM_001146124 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding common_peak1_21_252_-1.12319583200036_7.42139565869413_11.4781341554263-2 chr4 59546737 59547238 + 11.4781341554263 NA intron (NM_144904, intron 1 of 14) intron (NM_144904, intron 1 of 14) 2377 NM_178164 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding common_peak1_21_252_-1.12319583200036_7.42139565869413_11.4781341554263 chr13 49653020 49653530 + 11.4781341554263 NA promoter-TSS (NM_025495) promoter-TSS (NM_025495) 197 NR_073167 70930 Mm.258915 NM_001081350 ENSMUSG00000021392 Nol8 4921532D18Rik|5730412B09Rik nucleolar protein 8 protein-coding unique_peak2_21_252_-1.12319583200036_7.42139565869413_11.4781341554263 chr11 120853094 120854684 + 11.4781341554263 NA intron (NM_027745, intron 18 of 18) intron (NM_027745, intron 18 of 18) -29342 NM_007988 14104 Mm.236443 NM_007988 ENSMUSG00000025153 Fasn A630082H08Rik|FAS fatty acid synthase protein-coding common_peak1_285_3253_-0.269195877903744_11.5334005967207_11.4721064378895 chr7 19000068 19003301 + 11.4721064378895 NA TTS (NM_145579) TTS (NM_145579) -2381 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding common_peak1_41_446_-0.800044066198463_8.40410898808409_11.4716831402644 chr7 19003867 19004605 + 11.4716831402644 NA 5' UTR (NM_178757, exon 1 of 1) 5' UTR (NM_178757, exon 1 of 1) 171 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding unique_peak1_30_67_1.37921936348397_6.77707252299232_11.4675112380205 chr14 121339759 121340431 + 11.4675112380205 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 39135 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_30_67_1.37921936348397_6.77707252299232_11.4675112380205 chr10 67127002 67127543 + 11.4675112380205 NA promoter-TSS (NM_207221) promoter-TSS (NM_207221) 14 NM_207221 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding common_peak2_262_1961_0.312331693056223_11.0942751727474_11.4653665114644 chr13 41604704 41607249 + 11.4653665114644 NA promoter-TSS (NM_001163572) promoter-TSS (NM_001163572) -240 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding unique_peak2_28_319_-0.973264780374794_7.83529570469996_11.4646228876634 chr13 45031009 45032334 + 11.4646228876634 NA Intergenic Intergenic -29575 NM_025772 94245 Mm.352311 NM_025772 ENSMUSG00000057531 Dtnbp1 5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy dystrobrevin binding protein 1 protein-coding common_peak2_70_290_0.748284202938734_8.55901744437765_11.4631685931252 chr14 121361252 121362777 + 11.4631685931252 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 17216 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_31_348_-0.924217651898129_7.98497440026059_11.4600556351011 chr10 21947222 21947935 + 11.4600556351011 NA intron (NM_001161845, intron 2 of 13) ID_B1|SINE|B4 -31094 NM_001161847 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak2_246_1800_0.324786652565447_10.976975792189_11.4569303216934 chr12 85703329 85706432 + 11.4569303216934 NA intron (NM_016767, intron 2 of 2) intron (NM_016767, intron 2 of 2) 18160 NM_016767 53314 Mm.6672 NM_016767 ENSMUSG00000034266 Batf B-ATF|SFA-2 basic leucine zipper transcription factor, ATF-like protein-coding common_peak2_66_264_0.780695150699161_8.44019612480014_11.4521468653953 chr1 86266257 86268123 + 11.4521468653953 NA intron (NM_001310702, intron 23 of 24) B1_Mur1|SINE|Alu -36031 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak1_162_1754_-0.373410871270552_10.5905498795566_11.451105851482 chr10 93446596 93449180 + 11.451105851482 NA Intergenic L2|LINE|L2 -5508 NM_001313897 16993 Mm.271071 NM_008517 ENSMUSG00000015889 Lta4h - leukotriene A4 hydrolase protein-coding common_peak2_162_1754_-0.373410871270552_10.5905498795566_11.451105851482 chr2 65180124 65184264 + 11.451105851482 NA intron (NM_177025, intron 1 of 13) intron (NM_177025, intron 1 of 13) 56432 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak2_149_894_0.451018147324406_10.0312529458138_11.4487731481438 chr19 56821395 56822812 + 11.4487731481438 NA Intergenic CpG -4106 NM_001002238 83561 Mm.247541 NM_031387 ENSMUSG00000025081 Tdrd1 MTR-1 tudor domain containing 1 protein-coding common_peak1_22_262_-1.10045818519879_7.48868989669291_11.448464498343 chr5 24586174 24586706 + 11.448464498343 NA promoter-TSS (NM_133913) promoter-TSS (NM_133913) -310 NM_133913 100910 Mm.140672 NM_133913 ENSMUSG00000038181 Chpf2 2010209O12Rik|AW060945|mKIAA1402|mir-671 chondroitin polymerizing factor 2 protein-coding common_peak1_22_262_-1.10045818519879_7.48868989669291_11.448464498343-2 chr5 140568367 140569012 + 11.448464498343 NA Intergenic Intergenic -3622 NM_030022 77998 Mm.160040 NM_030022 ENSMUSG00000036586 Grifin E130101O17Rik galectin-related inter-fiber protein protein-coding common_peak1_109_1155_-0.467022352928407_9.94141450603647_11.4475123706247 chr4 71290796 71292264 + 11.4475123706247 NA Intergenic IAPLTR4|LTR|ERVK -756602 NM_172694 230316 Mm.251188 NM_172694 ENSMUSG00000039270 Megf9 4933405H16Rik|9630025C07|Egfl5|mKIAA0818 multiple EGF-like-domains 9 protein-coding common_peak1_37_406_-0.841908469683001_8.24793074942475_11.443908025158 chr1 161792891 161793582 + 11.443908025158 NA Intergenic Intergenic -4741 NM_010177 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_38_104_1.15869793194174_7.29359448363699_11.4433017572889 chr9 75070963 75071926 + 11.4433017572889 NA 5' UTR (NM_010864, exon 1 of 41) 5' UTR (NM_010864, exon 1 of 41) 238 NM_010864 17918 Mm.3645 NM_010864 ENSMUSG00000034593 Myo5a 9630007J19Rik|AI413174|AI661011|Dbv|MVa|Myo5|MyoVA|Sev-1|d|d-120J|flail|flr myosin VA protein-coding common_peak2_372_3146_0.249030560663178_11.74427674363_11.4414116128216 chr6 86605550 86610234 + 11.4414116128216 NA Intergenic Intergenic -20282 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak1_223_2480_-0.310304336315438_11.1215538517347_11.4409097016918 chr11 30197360 30199020 + 11.4409097016918 NA promoter-TSS (NM_009260) promoter-TSS (NM_009260) 67 NM_009260 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak2_123_679_0.510515890969316_9.66464888162236_11.4403018174696 chr17 79614561 79616124 + 11.4403018174696 NA intron (NM_201361, intron 1 of 10) CpG 442 NM_201361 381110 Mm.209801 NM_201361 ENSMUSG00000036368 Rmdn2 AW061290|Fam82a1|RMD-2|mRMD-2 regulator of microtubule dynamics 2 protein-coding common_peak2_51_174_0.930822443994959_7.91662233382981_11.4323910689703 chr7 80032621 80033725 + 11.4323910689703 NA intron (NM_175433, intron 1 of 4) intron (NM_175433, intron 1 of 4) 6945 NM_175433 209225 Mm.290925 NM_175433 ENSMUSG00000048897 Zfp710 5430400N05Rik|9830165K13|AI324798|Znf710 zinc finger protein 710 protein-coding unique_peak1_17_19_2.1827572669853_5.41330672838001_11.4302192706204 chr10 81426417 81426824 + 11.4302192706204 NA intron (NM_026756, intron 1 of 8) intron (NM_026756, intron 1 of 8) 553 NM_008688 18029 Mm.426936 NM_008688 ENSMUSG00000055053 Nfic 1110019L22Rik|1500041O16Rik|AA589446|AI746521|NF1-C nuclear factor I/C protein-coding unique_peak1_17_19_2.1827572669853_5.41330672838001_11.4302192706204-2 chr14 66216535 66217000 + 11.4302192706204 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -3215 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak2_4_91_-2.28565235079895_5.38073578065754_11.4302192706204 chr17 18957138 18957749 + 11.4302192706204 NA Intergenic Lx4A|LINE|L1 43121 NM_001104549 627367 Mm.384131 NM_001104549 ENSMUSG00000091491 Vmn2r97 EG627367|Vn2r97 vomeronasal 2, receptor 97 protein-coding unique_peak1_17_19_2.1827572669853_5.41330672838001_11.4302192706204-3 chr8 36122578 36122995 + 11.4302192706204 NA intron (NM_172911, intron 3 of 5) intron (NM_172911, intron 3 of 5) 27958 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_50_535_-0.718418413330316_8.70687998379261_11.4283538642606 chr5 77094483 77095336 + 11.4283538642606 NA exon (NM_001159901, exon 1 of 2) exon (NM_001159901, exon 1 of 2) 358 NM_001159901 74318 Mm.181852 NM_175606 ENSMUSG00000059325 Hopx 1110018K11Rik|1200015P04Rik|2300002F06Rik|AI848177|AW490897|Cameo|Hdop|Hod|Hop|Ob1|Obl|Toto HOP homeobox protein-coding unique_peak1_14_11_2.59708162069019_4.88350331106625_11.4259779277741-2 chr9 44169558 44169933 + 11.4259779277741 NA intron (NM_007619, intron 3 of 15) intron (NM_007619, intron 3 of 15) 35087 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding unique_peak1_14_11_2.59708162069019_4.88350331106625_11.4259779277741 chr14 54251549 54251898 + 11.4259779277741 NA intron (NM_010015, intron 1 of 1) intron (NM_010015, intron 1 of 1) 2206 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_40_435_-0.806741059711501_8.36481379492118_11.4236376553733 chr14 121917023 121917773 + 11.4236376553733 NA intron (NM_026861, intron 4 of 8) intron (NM_026861, intron 4 of 8) -1624 NM_182806 110168 Mm.37405 NM_182806 ENSMUSG00000050350 Gpr18 - G protein-coupled receptor 18 protein-coding common_peak2_96_1014_-0.501925648709129_9.73630118771797_11.4214489788015 chr9 57420202 57422266 + 11.4214489788015 NA intron (NM_176831, intron 3 of 6) intron (NM_176831, intron 3 of 6) 18880 NM_176831 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak1_65_687_-0.622332495854861_9.11509850677467_11.4145824109948 chr10 75588799 75589925 + 11.4145824109948 NA promoter-TSS (NM_011820) promoter-TSS (NM_011820) -19 NM_011820 23887 Mm.257927 NM_011820 ENSMUSG00000006344 Ggt5 AI551243|GGL|GGT-REL|Ggtla1 gamma-glutamyltransferase 5 protein-coding common_peak1_16_205_-1.28296426620905_7.0450183940787_11.4144595496658 chr17 64600204 64600602 + 11.4144595496658 NA Intergenic Intergenic -1246 NM_008549 17158 Mm.2433 NM_008549 ENSMUSG00000024085 Man2a1 Mana-2|Mana2|Map-2 mannosidase 2, alpha 1 protein-coding common_peak2_95_464_0.605913184469413_9.1640434982301_11.4129134442834 chr1 78657218 78658907 + 11.4129134442834 NA promoter-TSS (NM_001136226) promoter-TSS (NM_001136226) 237 NM_001001981 195434 Mm.276016 NM_001001981 ENSMUSG00000079470 Utp14b 4932411L21Rik|jsd UTP14B small subunit processome component protein-coding unique_peak2_11_157_-1.51661759127136_6.54547195254142_11.4123799099658 chr10 81172852 81173882 + 11.4123799099658 NA Intergenic Intergenic -3264 NM_007907 13629 Mm.2903 NM_007907 ENSMUSG00000034994 Eef2 Ef-2 eukaryotic translation elongation factor 2 protein-coding common_peak1_38_415_-0.827496268533232_8.28669158387448_11.4091597276398 chr11 120457439 120458105 + 11.4091597276398 NA promoter-TSS (NM_152807) promoter-TSS (NM_152807) 291 NM_025560 66431 Mm.45063 NM_025560 ENSMUSG00000039670 Oxld1 1810049H13Rik oxidoreductase like domain containing 1 protein-coding common_peak1_44_135_1.03871579631429_7.60682073940749_11.4079384366596 chr12 8520704 8521716 + 11.4079384366596 NA Intergenic MTE2b|LTR|ERVL-MaLR 18356 NM_001038660 328059 Mm.46326 NM_177802 ENSMUSG00000020600 Slc7a15 Arpat solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 protein-coding common_peak2_44_135_1.03871579631429_7.60682073940749_11.4079384366596 chr2 156991433 156992133 + 11.4079384366596 NA intron (NM_180956, intron 1 of 16) CpG 328 NM_013865 29812 Mm.279256 NM_013865 ENSMUSG00000027634 Ndrg3 4833415O14Rik|AI747193|Ndr3 N-myc downstream regulated gene 3 protein-coding common_peak1_223_1574_0.345265570302352_10.7937688984258_11.4022658235994 chr19 29250674 29253060 + 11.4022658235994 NA promoter-TSS (NM_001048177) promoter-TSS (NM_001048177) 64 NM_008413 16452 Mm.275839 NM_008413 ENSMUSG00000024789 Jak2 Fd17 Janus kinase 2 protein-coding common_peak1_81_364_0.676302922484403_8.84990411500958_11.3986768461155 chr12 3890712 3891793 + 11.3986768461155 NA promoter-TSS (NM_153743) promoter-TSS (NM_153743) -492 NM_153743 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding common_peak1_54_191_0.89632851766476_8.03312675955354_11.3936478664601 chr13 81351083 81352061 + 11.3936478664601 NA intron (NM_054053, intron 83 of 89) intron (NM_054053, intron 83 of 89) 281572 NM_054053 110789 Mm.288694 NM_054053 ENSMUSG00000069170 Adgrv1 Frings|Gpr98|Mass1|Mgr1|VLGR1 adhesion G protein-coupled receptor V1 protein-coding common_peak1_107_1133_-0.471772735729921_9.91131855707727_11.393309225758 chr12 91590163 91591046 + 11.393309225758 NA promoter-TSS (NM_031391) promoter-TSS (NM_031391) -117 NM_175335 83602 Mm.275728 NM_031391 ENSMUSG00000020962 Gtf2a1 6330549H03Rik|AA536742|AA959775|AW060250|TfIIAa/b|Tfiia1 general transcription factor II A, 1 protein-coding common_peak1_34_376_-0.87697499874513_8.1199332138961_11.3932957668851 chr15 102244655 102245416 + 11.3932957668851 NA intron (NM_011244, intron 3 of 9) intron (NM_011244, intron 3 of 9) 1465 NM_001042727 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding common_peak1_253_2848_-0.287416900963452_11.3325314558421_11.3901609725494 chr12 102282020 102284403 + 11.3901609725494 NA promoter-TSS (NM_001161365) promoter-TSS (NM_001161365) 137 NM_177620 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_429_3804_0.226764329927718_12.0070629033548_11.3894451455395 chr15 76271949 76276073 + 11.3894451455395 NA intron (NM_028852, intron 1 of 4) intron (NM_028852, intron 1 of 4) -4172 NR_045747 100038659 Mm.448549 NR_045747 Mirt2 ENSMUSG00000075583|Gm10872|Gm24562 myocardial infraction associated transcript 2 ncRNA common_peak2_48_157_0.973095488733581_7.79032849254389_11.3894252632429 chr10 83001154 83002499 + 11.3894252632429 NA intron (NM_021439, intron 1 of 2) intron (NM_021439, intron 1 of 2) 16329 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_146_1569_-0.395538090715021_10.4187797984215_11.3870876700864 chr7 38183055 38184545 + 11.3870876700864 NA promoter-TSS (NM_028166) promoter-TSS (NM_028166) 13 NM_028166 72244 Mm.187554 NM_028166 1600014C10Rik AI428873 RIKEN cDNA 1600014C10 gene protein-coding common_peak2_490_4533_0.20863326374301_12.2508853076123_11.3866170646347 chr17 71484583 71487939 + 11.3866170646347 NA Intergenic Intergenic -10918 NM_028887 74355 Mm.194450 NM_028887 ENSMUSG00000024054 Smchd1 4931400A14Rik|AW554188|MommeD1|mKIAA0650 SMC hinge domain containing 1 protein-coding unique_peak2_17_214_-1.24350748771679_7.12643910573106_11.3850418703549 chr11 96934329 96935790 + 11.3850418703549 NA 3' UTR (NM_146026, exon 3 of 3) 3' UTR (NM_146026, exon 3 of 3) 5735 NM_146026 217138 Mm.342551 NM_146026 ENSMUSG00000047040 Prr15l Atad4|BC022765|E230006A12Rik proline rich 15-like protein-coding unique_peak1_18_22_2.07680224733988_5.56196307972695_11.3836682758809 chr7 101550359 101550797 + 11.3836682758809 NA Intergenic Intergenic 5224 NM_007490 11871 Mm.439746 NM_007490 ENSMUSG00000092517 Art2a-ps ARTC2|Art2a|Ly92a|Rt-6|Rt6|Rt6-1 ADP-ribosyltransferase 2a, pseudogene protein-coding common_peak2_48_514_-0.731552385159896_8.64265242949063_11.3828922365571 chr9 46152855 46155726 + 11.3828922365571 NA intron (NM_027498, intron 3 of 24) intron (NM_027498, intron 3 of 24) -74340 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding unique_peak1_29_63_1.4086564325977_6.70432821629885_11.3818606361915 chr2 26634857 26635602 + 11.3818606361915 NA intron (NM_019833, intron 4 of 4) intron (NM_019833, intron 4 of 4) 2756 NR_028572 100306955 Mm.27103 NR_028572 ENSMUSG00000064858 Snora43 ACA43 small nucleolar RNA, H/ACA box 43 snoRNA common_peak1_94_992_-0.507180117253162_9.70205984890179_11.3810368388514 chr9 106280478 106281502 + 11.3810368388514 NA promoter-TSS (NM_027354) promoter-TSS (NM_027354) -71 NM_027354 70235 Mm.23054 NM_027354 ENSMUSG00000023345 Poc1a 2510040D07Rik|Wdr51a|cha POC1 centriolar protein A protein-coding common_peak2_128_1365_-0.425880081882857_10.2028017273487_11.3806923954163 chr1 97621124 97625041 + 11.3806923954163 NA Intergenic Intergenic 38936 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak1_149_895_0.449407097418421_10.0320584707668_11.3755600511287 chr4 86748018 86749422 + 11.3755600511287 NA 5' UTR (NM_184088, exon 1 of 32) 5' UTR (NM_184088, exon 1 of 32) 165 NM_184088 329877 Mm.273718 NM_184088 ENSMUSG00000038024 Dennd4c 1700065A05Rik|AA420392 DENN/MADD domain containing 4C protein-coding common_peak1_14_186_-1.36485033847629_6.86446929064949_11.3751363889168 chr4 135206591 135207040 + 11.3751363889168 NA Intergenic Intergenic 65945 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak2_55_197_0.883820441124672_8.07126684064194_11.3748202894562 chr16 23982505 23983936 + 11.3748202894562 NA intron (NM_009744, intron 1 of 9) intron (NM_009744, intron 1 of 9) 5392 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak2_36_95_1.19482115049025_7.18237307596628_11.3743864694198 chr4 47251295 47252226 + 11.3743864694198 NA intron (NM_009928, intron 5 of 39) intron (NM_009928, intron 5 of 39) 43748 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding unique_peak2_19_232_-1.1730519170235_7.27766018614253_11.371514825076 chr15 81960044 81960906 + 11.371514825076 NA intron (NM_001282040, intron 1 of 6) CpG 455 NM_001282040 29858 Mm.18939 NM_013872 ENSMUSG00000022474 Pmm1 C77612 phosphomannomutase 1 protein-coding unique_peak2_18_223_-1.20699071866071_7.20385956272725_11.3714782293337 chr14 79293180 79294401 + 11.3714782293337 NA intron (NM_025427, intron 2 of 4) intron (NM_025427, intron 2 of 4) 7845 NM_025427 66214 Mm.29811 NM_025427 ENSMUSG00000022018 Rgcc 1190002H23Rik|Rgc-32|Rgc32 regulator of cell cycle protein-coding common_peak1_103_1089_-0.481466552650645_9.84937914333897_11.3671361762662 chr5 136961805 136962929 + 11.3671361762662 NA intron (NM_025562, intron 1 of 4) intron (NM_025562, intron 1 of 4) 290 NM_025562 66437 Mm.25849 NM_025562 ENSMUSG00000019054 Fis1 2010003O14Rik|Ttc11 fission, mitochondrial 1 protein-coding common_peak2_56_594_-0.672247138645133_8.88062228887274_11.3661779479404 chr1 180225542 180226956 + 11.3661779479404 NA TTS (NM_001128605) TTS (NM_001128605) 19701 NM_011183 19165 Mm.330850 NM_011183 ENSMUSG00000010609 Psen2 ALG-3|Ad4h|Alg3|PS-2|PS2|Psnl2|STM2 presenilin 2 protein-coding common_peak1_93_981_-0.509835815702317_9.68466130646353_11.3616738267558 chr2 178515919 178517631 + 11.3616738267558 NA Intergenic Intergenic 86260 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak1_80_358_0.678502049169827_8.82709105840797_11.3615765697186 chr2 112367345 112368489 + 11.3615765697186 NA 5' UTR (NM_026519, exon 1 of 5) 5' UTR (NM_026519, exon 1 of 5) 110 NM_026519 68032 Mm.220942 NM_026519 ENSMUSG00000027131 Emc4 2610318K02Rik|Tmem85 ER membrane protein complex subunit 4 protein-coding common_peak2_57_604_-0.665515706463031_8.90803347893044_11.3596153441127 chr3 38393333 38395197 + 11.3596153441127 NA Intergenic Intergenic 90551 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding common_peak1_71_297_0.738741463783217_8.58853925235377_11.3591582734288 chr5 114650834 114651773 + 11.3591582734288 NA intron (NM_022017, intron 1 of 15) intron (NM_022017, intron 1 of 15) 7118 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding common_peak1_79_832_-0.55781383536206_9.42326576768452_11.3586458296456 chrX 160137844 160138468 + 11.3586458296456 NA intron (NM_008810, intron 1 of 10) CpG 274 NM_008810 18597 Mm.34775 NM_008810 ENSMUSG00000031299 Pdha1 Pdha-1 pyruvate dehydrogenase E1 alpha 1 protein-coding common_peak1_172_1097_0.40854819248735_10.3049364352489_11.3567157632348 chr14 105258144 105259625 + 11.3567157632348 NA exon (NM_029561, exon 1 of 8) exon (NM_029561, exon 1 of 8) 211 NM_001190989 76273 Mm.290669 NM_029561 ENSMUSG00000053253 Ndfip2 0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165 Nedd4 family interacting protein 2 protein-coding unique_peak2_25_290_-1.02945409826735_7.67014829377461_11.3562317453617 chr8 117252225 117253679 + 11.3562317453617 NA Intergenic Intergenic -4067 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_25_290_-1.02945409826735_7.67014829377461_11.3562317453617 chr1 36546693 36547254 + 11.3562317453617 NA non-coding (NR_132321, exon 1 of 4) non-coding (NR_132321, exon 1 of 4) 279 NM_001310533 109346 Mm.247537 NM_026241 ENSMUSG00000079610 Ankrd39 9130416N05Rik|C030004B10Rik ankyrin repeat domain 39 protein-coding common_peak2_211_2332_-0.319004204168374_11.0284684899_11.3535314839335 chr5 25528746 25531032 + 11.3535314839335 NA promoter-TSS (NR_027388) promoter-TSS (NR_027388) -129 NR_027388 73571 Mm.105263 NR_027388 ENSMUSG00000101856 1700096K18Rik - RIKEN cDNA 1700096K18 gene ncRNA common_peak1_24_280_-1.04841112808454_7.61022075617866_11.3522229653262 chr9 61708114 61708787 + 11.3522229653262 NA Intergenic Intergenic 206060 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_227_1614_0.340404892341599_10.8275208957521_11.3508496039332 chr18 75375929 75379260 + 11.3508496039332 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 10229 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_42_454_-0.783995564832107_8.43772495267_11.3500098071917 chr4 114999303 115000092 + 11.3500098071917 NA promoter-TSS (NM_009185) promoter-TSS (NM_009185) -421 NM_001304559 20460 Mm.3988 NM_009185 ENSMUSG00000028718 Stil Sil Scl/Tal1 interrupting locus protein-coding common_peak1_426_3770_0.227324125170778_11.9943934977271_11.3495837426231 chr19 46726959 46730610 + 11.3495837426231 NA intron (NM_020577, intron 10 of 10) intron (NM_020577, intron 10 of 10) 21341 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak1_88_927_-0.524962626363385_9.59549968194588_11.3457171134113 chr11 69921659 69922696 + 11.3457171134113 NA promoter-TSS (NM_001166589) promoter-TSS (NM_001166589) -219 NM_001166593 276770 Mm.18026 NM_181582 ENSMUSG00000078812 Eif5a AA410058|D19Wsu54e|Eif4d|Eif5a1|eIF-4D|eIF-5A|eIF-5A-1|eIF-5A1 eukaryotic translation initiation factor 5A protein-coding common_peak1_39_425_-0.816963081408705_8.32622807952148_11.3447197198483 chrX 167092186 167092738 + 11.3447197198483 NA Intergenic Intergenic -22092 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak1_28_318_-0.968749299252301_7.83303796413872_11.3430798471206 chr15 99644097 99644710 + 11.3430798471206 NA intron (NM_012025, intron 1 of 17) intron (NM_012025, intron 1 of 17) 7253 NM_001253808 26934 Mm.273804 NM_012025 ENSMUSG00000023015 Racgap1 AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478 Rac GTPase-activating protein 1 protein-coding unique_peak1_23_39_1.69184737320473_6.16785178148973_11.3397022399044 chr13 101801373 101802071 + 11.3397022399044 NA Intergenic GC_rich|Low_complexity|Low_complexity -33505 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding unique_peak1_23_39_1.69184737320473_6.16785178148973_11.3397022399044-3 chr5 114374771 114375242 + 11.3397022399044 NA exon (NM_001159941, exon 2 of 7) exon (NM_001159941, exon 2 of 7) 5499 NM_026145 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding unique_peak1_23_39_1.69184737320473_6.16785178148973_11.3397022399044-2 chr3 28405249 28405877 + 11.3397022399044 NA intron (NM_001163007, intron 2 of 31) intron (NM_001163007, intron 2 of 31) -14380 NR_130342 100628591 NR_130342 ENSMUSG00000092990 Mir466q Mir446q|mmu-mir-466q|mu-mir-446q microRNA 466q ncRNA common_peak2_33_366_-0.889487680682686_8.07489241250187_11.3343178296814 chr6 83121622 83122501 + 11.3343178296814 NA promoter-TSS (NM_001083923) promoter-TSS (NM_001083923) -600 NM_001083922 22377 Mm.1109 NM_016757 ENSMUSG00000030035 Wbp1 AI255152 WW domain binding protein 1 protein-coding common_peak1_62_655_-0.635942844666301_9.03958058228493_11.3339286742897 chr15 75111397 75112516 + 11.3339286742897 NA promoter-TSS (NM_001099217) promoter-TSS (NM_001099217) -7 NM_001099217 100041546 Mm.482110 NM_001099217 ENSMUSG00000022584 Ly6c2 Ly-6C.2|Ly-6C2 lymphocyte antigen 6 complex, locus C2 protein-coding common_peak1_137_795_0.472583010889501_9.8729161259884_11.3333644420945 chr4 111719092 111721206 + 11.3333644420945 NA 5' UTR (NM_026470, exon 1 of 13) 5' UTR (NM_026470, exon 1 of 13) 139 NM_026470 67946 Mm.275526 NM_026470 ENSMUSG00000034401 Spata6 1700062C23Rik|AI790763|Hash|KRP|Mash spermatogenesis associated 6 protein-coding common_peak2_361_3025_0.25262335444598_11.6895079494397_11.3329743092789 chr18 80578066 80584169 + 11.3329743092789 NA Intergenic Intergenic -36571 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_65_686_-0.620234029970863_9.11404927383267_11.3313334225329 chr8 107504488 107505592 + 11.3313334225329 NA intron (NM_025830, intron 6 of 23) intron (NM_025830, intron 6 of 23) -46204 NR_029553 387158 NR_029553 ENSMUSG00000065439 Mir140 Mirn140|mir-140|mmu-mir-140 microRNA 140 ncRNA common_peak2_92_443_0.616400854537485_9.10261629361885_11.3274452254656 chr6 15720277 15721617 + 11.3274452254656 NA 5' UTR (NM_175088, exon 1 of 5) 5' UTR (NM_175088, exon 1 of 5) 286 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding unique_peak1_24_43_1.62658357349909_6.27272340538684_11.3251418023875 chr1 87656726 87657190 + 11.3251418023875 NA intron (NR_122078, intron 2 of 27) intron (NR_122078, intron 2 of 27) 36646 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding unique_peak1_24_43_1.62658357349909_6.27272340538684_11.3251418023875-2 chr12 76527420 76527943 + 11.3251418023875 NA Intergenic Intergenic 5531 NR_039597 100628604 NR_039597 ENSMUSG00000092738 Mir5135 mir-5135|mmu-mir-5135|mu-mir-5135 microRNA 5135 ncRNA common_peak2_64_676_-0.6260975032421_9.08996327195395_11.3238888704801 chr10 93369612 93371681 + 11.3238888704801 NA Intergenic Intergenic 34414 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak1_64_676_-0.6260975032421_9.08996327195395_11.3238888704801 chr11 5431169 5432472 + 11.3238888704801 NA intron (NM_001080924, intron 1 of 8) intron (NM_001080924, intron 1 of 8) 13027 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding common_peak1_177_1926_-0.352510176345177_10.7358857681231_11.3207718797054 chr9 64172386 64173957 + 11.3207718797054 NA promoter-TSS (NM_026507) promoter-TSS (NM_026507) -216 NM_024212 67891 Mm.280083 NM_024212 ENSMUSG00000032399 Rpl4 2010004J23Rik ribosomal protein L4 protein-coding common_peak2_46_494_-0.748153627540955_8.57720790119649_11.3185485241525 chr15 99335270 99337155 + 11.3185485241525 NA intron (NM_001310623, intron 2 of 24) intron (NM_001310623, intron 2 of 24) 34270 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_115_617_0.530424908980907_9.53667548239483_11.3174320315716 chr7 45068811 45069848 + 11.3174320315716 NA intron (NM_001163684, intron 1 of 8) B1_Mur1|SINE|Alu 6900 NM_025533 66394 Mm.272139 NM_025533 ENSMUSG00000003421 Nosip 2310061K06Rik|CGI-25 nitric oxide synthase interacting protein protein-coding common_peak2_86_905_-0.530569409380382_9.55808253535604_11.3162672000834 chr9 114751740 114753745 + 11.3162672000834 NA Intergenic Intergenic 21539 NM_026036 67213 Mm.28858 NM_026036 ENSMUSG00000032434 Cmtm6 2810051A14Rik|AA536733|Cklfsf6 CKLF-like MARVEL transmembrane domain containing 6 protein-coding common_peak2_81_852_-0.548346355066508_9.46222875378504_11.3158979037441 chr18 67869120 67871923 + 11.3158979037441 NA intron (NM_027556, intron 39 of 45) intron (NM_027556, intron 39 of 45) -62736 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_27_308_-0.984898277886449_7.77901388896115_11.3156630317195 chr15 78563624 78564035 + 11.3156630317195 NA intron (NM_009008, intron 5 of 6) MTEa|LTR|ERVL-MaLR 8954 NM_009008 19354 Mm.1972 NM_009008 ENSMUSG00000033220 Rac2 AI323801|AI452260 RAS-related C3 botulinum substrate 2 protein-coding common_peak1_35_90_1.22350303286033_7.11954615662886_11.3150202795613 chr1 128704619 128705277 + 11.3150202795613 NA Intergenic Intergenic -112649 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding unique_peak2_51_544_-0.708078863837001_8.73607298774579_11.3143025739538 chr8 83757131 83759337 + 11.3143025739538 NA Intergenic B3A|SINE|B2 -16923 NM_001163031 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak1_302_2381_0.283025011894628_11.3594702038114_11.3133823914593 chr3 108910250 108912329 + 11.3133823914593 NA exon (NM_025845, exon 1 of 6) exon (NM_025845, exon 1 of 6) 415 NM_025845 66921 Mm.51049 NM_025845 ENSMUSG00000027881 Prpf38b 1110021E09Rik|AU018955 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B protein-coding common_peak2_106_1120_-0.471600143449653_9.8947704910806_11.3130735274744 chr19 46760443 46762691 + 11.3130735274744 NA promoter-TSS (NM_033569) promoter-TSS (NM_033569) -42 NM_033569 94219 Mm.306903 NM_033569 ENSMUSG00000064105 Cnnm2 AU015877|AW048635|Acdp2|Clp2 cyclin M2 protein-coding common_peak1_106_1120_-0.471600143449653_9.8947704910806_11.3130735274744 chr7 140137335 140138665 + 11.3130735274744 NA intron (NM_199301, intron 1 of 10) intron (NM_199301, intron 1 of 10) 436 NM_199301 212508 Mm.296088 NM_199301 ENSMUSG00000039018 Mtg1 Gm169|Gtpbp7 mitochondrial ribosome-associated GTPase 1 protein-coding common_peak1_94_991_-0.505726520111663_9.70133305033104_11.3117293118228 chr18 10617477 10618519 + 11.3117293118228 NA intron (NM_009226, intron 1 of 3) CpG 202 NM_009226 20641 Mm.603 NM_009226 ENSMUSG00000002477 Snrpd1 AA407109|AL023031|SMD1 small nuclear ribonucleoprotein D1 protein-coding common_peak2_31_72_1.33304101543151_6.85634506659577_11.3096969426158 chr17 79346409 79347123 + 11.3096969426158 NA intron (NM_026514, intron 1 of 1) intron (NM_026514, intron 1 of 1) 8325 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak2_31_72_1.33304101543151_6.85634506659577_11.3096969426158-2 chr5 29860972 29861624 + 11.3096969426158 NA intron (NR_105781, intron 1 of 2) intron (NR_105781, intron 1 of 2) 72287 NR_105781 102465962 NR_105781 ENSMUSG00000098448 Mir6362 Gm27812|mmu-mir-6362 microRNA 6362 ncRNA unique_peak1_28_59_1.44177271890405_6.62777695506054_11.3061769097577 chr2 14130434 14131122 + 11.3061769097577 NA intron (NM_011484, intron 7 of 13) intron (NM_011484, intron 7 of 13) -43746 NM_001081310 625286 Mm.158781 NM_001081310 ENSMUSG00000061531 Tmem236 2010003H20Rik|Fam23a|Gm613 transmembrane protein 236 protein-coding common_peak2_65_259_0.781564445818782_8.41315003593785_11.304189728881 chr6 133104813 133105898 + 11.304189728881 NA non-coding (NR_073368, exon 1 of 4) non-coding (NR_073368, exon 1 of 4) 116 NR_073368 381820 Mm.291762 NM_001163445 ENSMUSG00000072704 Smim10l1 2700089E24Rik|AI662692 small integral membrane protein 10 like 1 protein-coding common_peak1_50_169_0.938279840989755_7.87853085663258_11.3030950790772 chr2 59611852 59612652 + 11.3030950790772 NA intron (NM_198294, intron 1 of 26) CpG 210 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak1_85_894_-0.533404390711313_9.53904167679596_11.3026946062788 chr5 86172013 86173417 + 11.3026946062788 NA promoter-TSS (NM_172712) promoter-TSS (NM_172712) 28 NM_172712 231380 Mm.34012 NM_172712 ENSMUSG00000035898 Uba6 4930542H01|5730469D23Rik|AU021846|AW124799|E1-L2|Ube1l2 ubiquitin-like modifier activating enzyme 6 protein-coding common_peak1_38_414_-0.824024076626427_8.28495548792107_11.302515239805 chr1 54914832 54915664 + 11.302515239805 NA intron (NM_001081433, intron 1 of 27) MIR|SINE|MIR 11139 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_61_234_0.816777569355663_8.28490573124283_11.302515239805 chr4 95302868 95304299 + 11.302515239805 NA Intergenic Intergenic -251361 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_117_633_0.523799686088774_9.57023887318379_11.3017068824978-2 chr2 33467245 33468800 + 11.3017068824978 NA intron (NM_027947, intron 1 of 3) intron (NM_027947, intron 1 of 3) 510 NM_027947 71834 Mm.44186 NM_027947 ENSMUSG00000026788 Zbtb43 1700010E06Rik|Zfp297b|mKIAA0414 zinc finger and BTB domain containing 43 protein-coding common_peak2_117_633_0.523799686088774_9.57023887318379_11.3017068824978 chr14 50943866 50945650 + 11.3017068824978 NA intron (NM_013632, intron 1 of 5) intron (NM_013632, intron 1 of 5) 455 NM_013632 18950 Mm.17932 NM_013632 ENSMUSG00000021871 Pnp AL024301|AU015798|Np|Np-1|Np-2|Pnp1 purine-nucleoside phosphorylase protein-coding common_peak1_59_222_0.834368843863755_8.21808432185218_11.3006028317842 chr10 21252510 21253367 + 11.3006028317842 NA Intergenic Intergenic -43041 NM_001042593 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak2_91_436_0.620195956965624_9.08158744798341_11.3004714898378 chr12 3890713 3892478 + 11.3004714898378 NA promoter-TSS (NM_153743) promoter-TSS (NM_153743) -149 NM_153743 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding unique_peak2_30_337_-0.934197231547877_7.93378082050824_11.2979493430595 chr11 70524711 70525969 + 11.2979493430595 NA promoter-TSS (NM_008946) promoter-TSS (NM_008946) -17 NM_008946 19175 Mm.98 NM_008946 ENSMUSG00000018286 Psmb6 Lmp19|Mpnd proteasome (prosome, macropain) subunit, beta type 6 protein-coding common_peak1_21_32_1.8154036233355_5.9520959310262_11.2966615320391 chr11 86576925 86577431 + 11.2966615320391 NA Intergenic Intergenic 6980 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA unique_peak1_21_32_1.8154036233355_5.9520959310262_11.2966615320391-2 chr2 151974449 151974899 + 11.2966615320391 NA promoter-TSS (NM_028666) promoter-TSS (NM_028666) -693 NM_028666 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding unique_peak1_21_32_1.8154036233355_5.9520959310262_11.2966615320391 chr2 138256630 138257090 + 11.2966615320391 NA intron (NM_001025431, intron 1 of 4) CpG 276 NM_001025431 228662 Mm.153405 NM_145534 ENSMUSG00000062098 Btbd3 mKIAA0952 BTB (POZ) domain containing 3 protein-coding common_peak1_26_298_-1.00179410735851_7.72310462051885_11.2951759056408 chr12 55488874 55489388 + 11.2951759056408 NA TTS (NM_010907) TTS (NM_010907) 3516 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak1_26_298_-1.00179410735851_7.72310462051885_11.2951759056408-2 chr19 41328162 41328882 + 11.2951759056408 NA intron (NM_031376, intron 4 of 16) B3A|SINE|B2 56548 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_33_81_1.27259656754244_6.99385028838931_11.2918202735349 chr8 115159710 115160437 + 11.2918202735349 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 546821 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_191_2091_-0.337054734595778_10.8621397689491_11.291818883207 chr1 74247454 74251127 + 11.291818883207 NA intron (NM_029711, intron 3 of 9) intron (NM_029711, intron 3 of 9) 12740 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak1_191_2091_-0.337054734595778_10.8621397689491_11.291818883207 chr15 100598669 100600877 + 11.291818883207 NA 5' UTR (NM_001304965, exon 1 of 11) 5' UTR (NM_001304965, exon 1 of 11) 211 NM_001304965 19009 Mm.28825 NM_010127 ENSMUSG00000009739 Pou6f1 2310038G18Rik|C79593|Emb|cns-1 POU domain, class 6, transcription factor 1 protein-coding common_peak1_64_253_0.788229833560731_8.38279960355253_11.2917858748361 chr4 99828768 99829850 + 11.2917858748361 NA promoter-TSS (NM_026348) promoter-TSS (NM_026348) -191 NM_026348 67733 Mm.257094 NM_026348 ENSMUSG00000028549 Itgb3bp 4930471O16Rik|AU022583 integrin beta 3 binding protein (beta3-endonexin) protein-coding common_peak2_326_3775_-0.246766297678919_11.7592599005224_11.2902990776767 chr9 44148500 44154721 + 11.2902990776767 NA exon (NM_007619, exon 16 of 16) exon (NM_007619, exon 16 of 16) 16952 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding common_peak2_114_609_0.533900958521581_9.51961591171104_11.2899318788562 chr7 81344057 81345849 + 11.2899318788562 NA exon (NM_009092, exon 2 of 5) exon (NM_009092, exon 2 of 5) 281 NM_009092 20068 Mm.42767 NM_009092 ENSMUSG00000061787 Rps17 - ribosomal protein S17 protein-coding common_peak2_403_3504_0.234874087080184_11.8926357724381_11.2898361600416 chr9 44984392 44987968 + 11.2898361600416 NA intron (NM_013487, intron 4 of 4) intron (NM_013487, intron 4 of 4) 4394 NM_013487 12500 Mm.4527 NM_013487 ENSMUSG00000032094 Cd3d T3d CD3 antigen, delta polypeptide protein-coding common_peak1_106_547_0.560938336395246_9.37850125115815_11.2863761204853 chr4 123917402 123918257 + 11.2863761204853 NA intron (NM_017475, intron 1 of 6) CpG 396 NM_017475 54170 Mm.220922 NM_017475 ENSMUSG00000028646 Rragc AU041672|Gtr2|RAGC|TIB929|YGR163W Ras-related GTP binding C protein-coding common_peak2_71_747_-0.588984475642258_9.25240222206651_11.2854061968549 chrX 151343636 151345435 + 11.2854061968549 NA exon (NM_198105, exon 1 of 16) exon (NM_198105, exon 1 of 16) 312 NM_198105 207375 Mm.391339 NM_198105 ENSMUSG00000025262 Fam120c D930001I21Rik|ORF34 family with sequence similarity 120, member C protein-coding common_peak2_113_1197_-0.455301162052255_9.99876161176266_11.2848563663694 chr4 47473700 47475400 + 11.2848563663694 NA promoter-TSS (NM_019998) promoter-TSS (NM_019998) -111 NM_024171 66212 Mm.20188 NM_024171 ENSMUSG00000053317 Sec61b 1190006C12Rik|AI326121|AW122942 Sec61 beta subunit protein-coding common_peak2_72_758_-0.585637049029838_9.27513755090055_11.284062436764 chr12 17372321 17375043 + 11.284062436764 NA intron (NM_001008421, intron 12 of 20) intron (NM_001008421, intron 12 of 20) 18290 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA common_peak2_299_2350_0.284315507009358_11.3412165771577_11.2810830718648 chr4 124750840 124757607 + 11.2810830718648 NA intron (NR_126474, intron 7 of 24) B4A|SINE|B4 10442 NR_030480 735263 NR_030480 ENSMUSG00000076119 Mir698 Mirn698|mir-698|mmu-mir-698 microRNA 698 ncRNA common_peak2_498_4634_0.205448978896547_12.2810781129612_11.2808341344035 chr14 61679569 61685265 + 11.2808341344035 NA promoter-TSS (NR_028264) promoter-TSS (NR_028264) -44 NR_028264 668253 Mm.32886 NR_028264 ENSMUSG00000097589 Dleu2 1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2 deleted in lymphocytic leukemia, 2 ncRNA unique_peak2_32_356_-0.902460316368219_8.02855010584499_11.2789425421347 chr1 156420285 156421736 + 11.2789425421347 NA Intergenic CpG 53318 NM_009230 20652 Mm.28099 NM_009230 ENSMUSG00000026600 Soat1 8430426K15Rik|ACAT-1|AW550831|Acact|ald|hid sterol O-acyltransferase 1 protein-coding common_peak1_84_884_-0.537891797117869_9.52058774641143_11.2750525115829 chr8 72159955 72160965 + 11.2750525115829 NA promoter-TSS (NM_023126) promoter-TSS (NM_023126) -740 NM_023126 17274 Mm.162811 NM_023126 ENSMUSG00000003037 Rab8a AA409338|Mel RAB8A, member RAS oncogene family protein-coding common_peak1_90_429_0.624152193130588_9.06026894615475_11.2743118417018 chr15 81744908 81746408 + 11.2743118417018 NA intron (NM_001081016, intron 1 of 22) intron (NM_001081016, intron 1 of 22) 810 NM_001081016 20286 Mm.432075 NM_001081016 ENSMUSG00000022390 Zc3h7b Gm627|Scrg3|Zc2h7b|mKIAA1031 zinc finger CCCH type containing 7B protein-coding common_peak2_312_2489_0.27651316903877_11.4201866114748_11.272971963766 chr19 45056331 45059478 + 11.272971963766 NA Intergenic Intergenic 10328 NM_001178013 94280 Mm.36169 NM_053197 ENSMUSG00000025212 Sfxn3 - sideroflexin 3 protein-coding common_peak2_144_1544_-0.396622221400847_10.3950800120913_11.2723173945225 chr5 45292740 45296402 + 11.2723173945225 NA intron (NR_131933, intron 4 of 5) intron (NR_131933, intron 4 of 5) 129829 NR_131933 52401 Mm.33854 NR_131933 ENSMUSG00000029092 D5Ertd615e 4930435H24Rik DNA segment, Chr 5, ERATO Doi 615, expressed ncRNA common_peak1_115_1219_-0.450777495564967_10.0272766846678_11.2717046982036 chr13 21753037 21754642 + 11.2717046982036 NA promoter-TSS (NM_178183) promoter-TSS (NM_178183) 73 NM_178183 319169 Mm.370338 NM_178183 ENSMUSG00000063021 Hist1h2ak - histone cluster 1, H2ak protein-coding common_peak2_150_905_0.445153144939317_10.0459438125159_11.2711338825423 chr9 122350900 122352554 + 11.2711338825423 NA 5' UTR (NM_026179, exon 1 of 7) 5' UTR (NM_026179, exon 1 of 7) 111 NM_026179 67469 Mm.280254 NM_026179 ENSMUSG00000032540 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 protein-coding common_peak2_70_737_-0.594317460213379_9.23031827595371_11.2700588996579 chr1 171280475 171282130 + 11.2700588996579 NA promoter-TSS (NM_008911) promoter-TSS (NM_008911) -116 NM_008911 19044 Mm.266888 NM_008911 ENSMUSG00000062729 Ppox Ppo protoporphyrinogen oxidase protein-coding common_peak1_40_115_1.10346226993785_7.4097121300965_11.2689338366005 chr17 28247054 28247963 + 11.2689338366005 NA intron (NM_011145, intron 2 of 7) intron (NM_011145, intron 2 of 7) 14754 NM_011145 19015 Mm.328914 NM_011145 ENSMUSG00000002250 Ppard NUC-1|NUC1|Nr1c2|PPAR-beta|PPAR-delta|PPAR[b]|PPARdelta|Pparb|Pparb/d peroxisome proliferator activator receptor delta protein-coding common_peak2_47_152_0.9829999365858_7.74888781098555_11.267612970651 chr5 114896893 114898079 + 11.267612970651 NA 5' UTR (NM_011854, exon 1 of 6) 5' UTR (NM_011854, exon 1 of 6) 552 NM_011854 23962 Mm.228363 NM_011854 ENSMUSG00000029561 Oasl2 M1204|Mmu-OASL|Oasl 2'-5' oligoadenylate synthetase-like 2 protein-coding common_peak1_47_152_0.9829999365858_7.74888781098555_11.267612970651 chr13 108158023 108158759 + 11.267612970651 NA promoter-TSS (NM_028042) promoter-TSS (NM_028042) 234 NM_001127346 75597 Mm.276040 NM_001127346 ENSMUSG00000068184 Ndufaf2 1810058I14Rik|C86051|Ndufa12l|mimitin NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2 protein-coding common_peak2_85_393_0.65028766198393_8.94719565044834_11.2660872118776 chr6 91971671 91974406 + 11.2660872118776 NA Intergenic Intergenic -14072 NM_172731 232237 Mm.295740 NM_172731 ENSMUSG00000034037 Fgd5 C330025N11Rik|ZFYVE23|mFLJ00274 FYVE, RhoGEF and PH domain containing 5 protein-coding common_peak1_41_444_-0.793574570868905_8.40087424041931_11.2655777885208 chrX 134541439 134542162 + 11.2655777885208 NA promoter-TSS (NM_013898) promoter-TSS (NM_013898) -130 NM_013898 30058 Mm.214504 NM_013898 ENSMUSG00000048007 Timm8a1 DXHXS1274E|Ddp1|Fci-12|Tim8a|Timm8a translocase of inner mitochondrial membrane 8A1 protein-coding common_peak1_36_395_-0.8495729688682_8.20457013564551_11.2651236804684 chr1 151688531 151689145 + 11.2651236804684 NA intron (NM_022018, intron 5 of 13) intron (NM_022018, intron 5 of 13) -66536 NM_001311165 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding common_peak1_16_204_-1.27594383853127_7.04150818023981_11.2643850265103 chr11 11522244 11522769 + 11.2643850265103 NA Intergenic Intergenic 33240 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak2_83_873_-0.540790203329388_9.5010943678359_11.2629453200309 chr8 15025995 15028988 + 11.2629453200309 NA exon (NM_029116, exon 2 of 2) exon (NM_029116, exon 2 of 2) 16466 NM_029116 74901 Mm.46675 NM_029116 ENSMUSG00000055675 Kbtbd11 2900016B01Rik|4930465M17Rik|mKIAA0711 kelch repeat and BTB (POZ) domain containing 11 protein-coding common_peak2_128_1363_-0.42376624261694_10.2017448077157_11.2625225065321 chr13 38036391 38038218 + 11.2625225065321 NA promoter-TSS (NM_027724) promoter-TSS (NM_027724) 315 NM_024242 71340 Mm.297130 NM_024242 ENSMUSG00000021428 Riok1 3110046C13Rik|5430416A05Rik|Ad034 RIO kinase 1 (yeast) protein-coding common_peak1_49_523_-0.720795498214709_8.6730252524301_11.2620313156621 chr16 96369639 96370401 + 11.2620313156621 NA intron (NM_028078, intron 2 of 7) intron (NM_028078, intron 2 of 7) 8256 NM_028078 72058 Mm.119714 NM_028078 ENSMUSG00000000159 Igsf5 2010003D20Rik|JCAM|Jam4 immunoglobulin superfamily, member 5 protein-coding common_peak2_273_3096_-0.273705799953445_11.4598027676979_11.2612800066205 chr10 91169862 91173235 + 11.2612800066205 NA promoter-TSS (NM_001080129) promoter-TSS (NM_001080129) 71 NM_001080132 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding unique_peak2_12_166_-1.45489535901948_6.65625661296431_11.2600319788548 chr13 19181721 19182930 + 11.2600319788548 NA Intergenic Intergenic 213488 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak1_240_1744_0.326840174157635_10.9324314081758_11.2577559451508 chr12 100897689 100900064 + 11.2577559451508 NA intron (NM_175493, intron 1 of 2) intron (NM_175493, intron 1 of 2) 648 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding common_peak1_29_327_-0.948895572020381_7.88310421860789_11.2572443944166 chr7 97579053 97579721 + 11.2572443944166 NA promoter-TSS (NM_001081267) promoter-TSS (NM_001081267) 110 NM_001177945 66273 Mm.41583 NM_183251 ENSMUSG00000035642 Aamdc 1810020D17Rik|1810037D19Rik|LI2 adipogenesis associated Mth938 domain containing protein-coding common_peak1_45_483_-0.753790121994729_8.54196817627723_11.2548367897547 chr4 46650157 46651040 + 11.2548367897547 NA promoter-TSS (NM_198664) promoter-TSS (NM_198664) -399 NM_198664 381605 Mm.331595 NM_198664 ENSMUSG00000039813 Tbc1d2 A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1 TBC1 domain family, member 2 protein-coding common_peak2_413_4930_-0.214322389914686_12.1605033425438_11.2488415141741 chrX 18161388 18164964 + 11.2488415141741 NA intron (NM_001310444, intron 1 of 28) CpG 601 NM_001310444 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak2_105_540_0.562869292802652_9.36091943022814_11.2485085469371 chr13 67608698 67610175 + 11.2485085469371 NA intron (NM_001163246, intron 1 of 3) intron (NM_001163246, intron 1 of 3) 271 NM_001163246 100416706 Mm.478045 NM_001163246 ENSMUSG00000058093 Zfp729b AA987127 zinc finger protein 729b protein-coding common_peak2_272_2068_0.301761629013322_11.1655987443667_11.2452730752285 chr16 52079427 52084768 + 11.2452730752285 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 50548 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_43_131_1.04201593452185_7.56540208661938_11.2434662815886 chr14 14294393 14294852 + 11.2434662815886 NA Intergenic MuRRS-int|LTR|ERV1 -33491 NM_147027 18330 Mm.484338 NM_147027 ENSMUSG00000072707 Olfr31 MOR274-1|MTPCR53 olfactory receptor 31 protein-coding common_peak1_43_131_1.04201593452185_7.56540208661938_11.2434662815886-2 chr8 106017082 106017947 + 11.2434662815886 NA intron (NM_025518, intron 2 of 15) intron (NM_025518, intron 2 of 15) -6028 NM_028038 71986 Mm.307515 NM_028038 ENSMUSG00000045538 Ddx28 2410004K13Rik|AI449652|Mddx28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 protein-coding common_peak1_146_872_0.451172909434527_9.99542429834671_11.243306788587 chr9 122950003 122951272 + 11.243306788587 NA promoter-TSS (NM_010620) promoter-TSS (NM_010620) 363 NM_025419 66202 Mm.268307 NM_025419 ENSMUSG00000032551 1110059G10Rik - RIKEN cDNA 1110059G10 gene protein-coding unique_peak1_27_55_1.47920982796032_6.54695983603776_11.2421462784303 chr16 58507427 58507942 + 11.2421462784303 NA intron (NM_018784, intron 1 of 10) intron (NM_018784, intron 1 of 10) 15628 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding common_peak1_27_55_1.47920982796032_6.54695983603776_11.2421462784303 chr11 11750038 11750499 + 11.2421462784303 NA intron (NM_001025597, intron 4 of 7) intron (NM_001025597, intron 4 of 7) 58694 NM_021891 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding common_peak2_50_533_-0.713025154560098_8.7041833544075_11.2402085732977 chr5 123057267 123059023 + 11.2402085732977 NA Intergenic CpG -11325 NM_029112 74890 Mm.141383 NM_029112 ENSMUSG00000029477 Morn3 4930438O03Rik MORN repeat containing 3 protein-coding common_peak2_242_1764_0.325024130987622_10.9479645336524_11.2393654801747 chr2 170128527 170134491 + 11.2393654801747 NA promoter-TSS (NM_001033299) promoter-TSS (NM_001033299) -289 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_125_1329_-0.428989059250414_10.1627160007633_11.2384705832036 chr6 136553126 136556525 + 11.2384705832036 NA intron (NM_019426, intron 1 of 14) intron (NM_019426, intron 1 of 14) 35974 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_17_213_-1.23678162452848_7.12307617413691_11.2382014941236 chr1 171231527 171232026 + 11.2382014941236 NA intron (NM_010185, intron 1 of 4) intron (NM_010185, intron 1 of 4) 2573 NM_010185 14127 Mm.22673 NM_010185 ENSMUSG00000058715 Fcer1g AI573376|CD23|FcR-gamma|FcR[g]|FcRgamma|Fce1g|FcepsilonRI|Ly-50 Fc receptor, IgE, high affinity I, gamma polypeptide protein-coding common_peak2_273_2079_0.300582054692763_11.1726588403748_11.2361534566124 chr15 76293675 76296549 + 11.2361534566124 NA exon (NM_001195537, exon 1 of 7) exon (NM_001195537, exon 1 of 7) 678 NM_001195537 100503915 Mm.393455 NM_001195537 ENSMUSG00000071724 Smpd5 ENSMUSG00000071724|Gm10345|MA-nSMase sphingomyelin phosphodiesterase 5 protein-coding common_peak2_325_2630_0.269061221941836_11.4959261441368_11.2341219400572 chr5 134227908 134234975 + 11.2341219400572 NA Intergenic Intergenic -1816 NR_104383 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak1_19_231_-1.1668467674968_7.27455761137917_11.2303301320891 chr19 53535029 53535598 + 11.2303301320891 NA intron (NM_001085390, intron 2 of 3) intron (NM_001085390, intron 2 of 3) 5995 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding unique_peak1_20_29_1.87058404818998_5.84218261970351_11.2278794641126 chr13 20798098 20798563 + 11.2278794641126 NA intron (NM_001281854, intron 1 of 4) intron (NM_001281854, intron 1 of 4) 4217 NM_012054 27052 Mm.314046 NM_012054 ENSMUSG00000021322 Aoah 4930433E13Rik acyloxyacyl hydrolase protein-coding unique_peak1_22_36_1.72900743846456_6.07395708486123_11.2278752739535 chr8 31113172 31113636 + 11.2278752739535 NA intron (NM_175136, intron 1 of 5) intron (NM_175136, intron 1 of 5) 1558 NM_175136 68867 Mm.29532 NM_175136 ENSMUSG00000039328 Rnf122 1110063C11Rik ring finger protein 122 protein-coding common_peak2_413_3621_0.230771316636265_11.9379564892683_11.2277264723836 chr11 74722248 74725256 + 11.2277264723836 NA non-coding (NR_037610, exon 1 of 11) non-coding (NR_037610, exon 1 of 11) 106 NR_037610 18472 Mm.397111 NM_013625 ENSMUSG00000020745 Pafah1b1 LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 protein-coding unique_peak2_18_222_-1.20053569652341_7.2006320516586_11.2275892691007 chr18 14675191 14676453 + 11.2275892691007 NA intron (NM_001161371, intron 2 of 8) intron (NM_001161371, intron 2 of 8) 7092 NM_001161369 268996 Mm.31761 NM_009280 ENSMUSG00000037013 Ss18 D130059H17|Ssxt|Syt SS18, nBAF chromatin remodeling complex subunit protein-coding common_peak2_18_222_-1.20053569652341_7.2006320516586_11.2275892691007 chr3 95588836 95589452 + 11.2275892691007 NA intron (NM_001177669, intron 1 of 3) intron (NM_001177669, intron 1 of 3) 210 NM_001177670 229593 Mm.245830 NM_146133 ENSMUSG00000046519 Golph3l 2010204I15Rik|AU015439|AW549227|C77637|Gpp34r golgi phosphoprotein 3-like protein-coding common_peak2_292_2277_0.288041631484738_11.2975728474505_11.224421913571 chr12 44268124 44270714 + 11.224421913571 NA intron (NM_026164, intron 1 of 9) CpG 265 NM_026164 67452 Mm.54126 NM_026164 ENSMUSG00000036257 Pnpla8 1200006O19Rik|AI467579|Ipla2(gamma) patatin-like phospholipase domain containing 8 protein-coding common_peak1_92_444_0.61315519503383_9.10423912337068_11.2244093078367 chr19 9055498 9057202 + 11.2244093078367 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 31606 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_92_444_0.61315519503383_9.10423912337068_11.2244093078367 chr9 75540603 75542507 + 11.2244093078367 NA intron (NM_016963, intron 1 of 9) intron (NM_016963, intron 1 of 9) 18102 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding unique_peak2_24_279_-1.04326782480858_7.60764910454068_11.2233823123811 chr11 121018552 121020431 + 11.2233823123811 NA Intergenic Intergenic 19987 NM_009854 12516 Mm.4100 NM_009854 ENSMUSG00000025163 Cd7 - CD7 antigen protein-coding common_peak2_44_136_1.02814655460411_7.61210536026258_11.2233823123811 chr1 170968878 170969898 + 11.2233823123811 NA intron (NM_001077189, intron 2 of 7) intron (NM_001077189, intron 2 of 7) 6683 NM_001077189 14130 Mm.425062 NM_010187 ENSMUSG00000026656 Fcgr2b AI528646|CD32|F630109E10Rik|Fc[g]RII|FcgRII|Fcgr2|Fcgr2a|Fcr-2|Fcr-3|Ly-17|Ly-m20|LyM-1|Lym-1|fcRII Fc receptor, IgG, low affinity IIb protein-coding common_peak2_44_136_1.02814655460411_7.61210536026258_11.2233823123811-2 chr3 101011715 101012941 + 11.2233823123811 NA intron (NM_001167906, intron 5 of 8) intron (NM_001167906, intron 5 of 8) 17167 NM_001167906 630146 Mm.190915 NM_001099332 ENSMUSG00000086564 Cd101 EWI-101|Gm1016|Gm734|Igsf2 CD101 antigen protein-coding common_peak1_24_279_-1.04326782480858_7.60764910454068_11.2233823123811 chr11 20107087 20107663 + 11.2233823123811 NA intron (NM_146243, intron 1 of 8) ID_B1|SINE|B4 5576 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding common_peak1_408_3563_0.232558104788019_11.9155606739159_11.2227742558617 chr4 117123424 117126290 + 11.2227742558617 NA intron (NR_024078, intron 1 of 6) intron (NR_024078, intron 1 of 6) 868 NR_024078 78611 Mm.446227 NM_001033187 Btbd19 9530048O09Rik|BB115071 BTB (POZ) domain containing 19 ncRNA common_peak1_78_345_0.687470863476591_8.77836365937502_11.2227207337902 chr17 25985063 25985980 + 11.2227207337902 NA Intergenic CpG -20016 NM_015830 50817 Mm.216072 NM_015830 ENSMUSG00000037326 Capn15 Solh calpain 15 protein-coding common_peak1_354_2950_0.254276927293331_11.6541266690787_11.2195285937316 chr1 152088399 152091117 + 11.2195285937316 NA intron (NM_197990, intron 1 of 5) CpG 562 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak1_48_158_0.963993281626329_7.79487959609752_11.2179535551405 chr12 17713939 17715012 + 11.2179535551405 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 23661 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_96_1011_-0.497655211330901_9.73416596902886_11.2159359084513 chr17 29613953 29615869 + 11.2159359084513 NA non-coding (NR_132314, exon 1 of 28) non-coding (NR_132314, exon 1 of 28) 122 NM_021419 58230 Mm.305994 NM_021419 ENSMUSG00000090083 Rnf8 3830404E21Rik|AIP37|laXp180 ring finger protein 8 protein-coding common_peak1_96_1011_-0.497655211330901_9.73416596902886_11.2159359084513 chr4 40850804 40852215 + 11.2159359084513 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) -1371 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA common_peak1_124_1317_-0.430013875993348_10.1491277170114_11.214462392266 chr12 87265675 87267224 + 11.214462392266 NA promoter-TSS (NM_001142580) promoter-TSS (NM_001142580) -163 NM_001142581 104799 Mm.208750 NM_134044 ENSMUSG00000021038 Vipas39 6720456H09Rik|9330175H22Rik|AI413782|SPE-39|Spe39|Vipar|hSPE-39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog protein-coding unique_peak2_4_90_-2.26988503494063_5.37285212272838_11.2119555151529 chr2 11213646 11214343 + 11.2119555151529 NA intron (NM_008859, intron 1 of 17) B3A|SINE|B2 41612 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_334_2729_0.263964051220832_11.5466672614176_11.2116032752113 chr17 44734118 44737039 + 11.2116032752113 NA exon (NM_001146038, exon 3 of 9) exon (NM_001146038, exon 3 of 9) 598 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_54_572_-0.68110031037099_8.82184117357141_11.2043792890722 chr10 93369907 93371122 + 11.2043792890722 NA Intergenic Intergenic 34282 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak2_57_210_0.85417643699174_8.14818740720306_11.2000238587889 chr13 81351050 81352274 + 11.2000238587889 NA intron (NM_054053, intron 83 of 89) intron (NM_054053, intron 83 of 89) 281482 NM_054053 110789 Mm.288694 NM_054053 ENSMUSG00000069170 Adgrv1 Frings|Gpr98|Mass1|Mgr1|VLGR1 adhesion G protein-coupled receptor V1 protein-coding unique_peak2_38_413_-0.820543507891464_8.28321520355359_11.1962495656777 chr1 43223628 43225702 + 11.1962495656777 NA Intergenic Intergenic -27904 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_95_1000_-0.500226168371185_9.7171131746504_11.1945333031997 chr12 69363422 69365095 + 11.1945333031997 NA Intergenic Intergenic -7082 NM_025441 66244 Mm.46705 NM_025441 ENSMUSG00000020982 Nemf 1500011I12Rik|4933405E14Rik|Sdccag1 nuclear export mediator factor protein-coding common_peak1_48_512_-0.725938778696369_8.63984562625887_11.1913975217851 chr12 8659532 8660341 + 11.1913975217851 NA Intergenic L2b|LINE|L2 -14198 NM_001160221 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding unique_peak2_9_137_-1.64400254033375_6.28652318661129_11.1902726253421 chr13 40922726 40923927 + 11.1902726253421 NA intron (NM_133219, intron 1 of 2) RMER17C|LTR|ERVK 5692 NM_133219 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding common_peak2_148_889_0.447263476253861_10.0212932639807_11.188937857972 chr14 12283781 12285224 + 11.188937857972 NA intron (NM_001284384, intron 1 of 4) CpG 299 NM_001284386 218734 Mm.44068 NM_146051 ENSMUSG00000033111 3830406C13Rik - RIKEN cDNA 3830406C13 gene protein-coding common_peak2_82_373_0.662611409280711_8.87820016452799_11.1879630792549 chr2 112367259 112368690 + 11.1879630792549 NA promoter-TSS (NM_026519) promoter-TSS (NM_026519) 53 NM_026519 68032 Mm.220942 NM_026519 ENSMUSG00000027131 Emc4 2610318K02Rik|Tmem85 ER membrane protein complex subunit 4 protein-coding unique_peak1_15_14_2.38936266751665_5.10157192936684_11.1862380883385-2 chr18 70607910 70608305 + 11.1862380883385 NA intron (NM_010773, intron 3 of 6) intron (NM_010773, intron 3 of 6) 39815 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding unique_peak1_15_14_2.38936266751665_5.10157192936684_11.1862380883385 chr11 60725077 60725486 + 11.1862380883385 NA intron (NM_001302207, intron 1 of 29) intron (NM_001302207, intron 1 of 29) 1982 NM_022009 14248 Mm.339755 NM_022009 ENSMUSG00000002812 Flii 3632430F08Rik|Fliih flightless I actin binding protein protein-coding common_peak1_192_1283_0.376375805323956_10.5146173897843_11.1860151111461 chr9 63735214 63737717 + 11.1860151111461 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 21529 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_451_4070_0.217576614405102_12.0999558133426_11.1858915865065 chr10 19012481 19016387 + 11.1858915865065 NA intron (NM_009397, intron 1 of 8) intron (NM_009397, intron 1 of 8) 976 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak2_517_4871_0.199633653756905_12.3501152447848_11.1852577405631 chr2 29644438 29651593 + 11.1852577405631 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 28295 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_516_4859_0.199771902060723_12.3466265495235_11.1812184912894 chr15 67172142 67178147 + 11.1812184912894 NA intron (NM_009177, intron 1 of 8) intron (NM_009177, intron 1 of 8) 1738 NM_009177 20442 Mm.248334 NM_009177 ENSMUSG00000013846 St3gal1 5330418N22Rik|AI467004|ST3GalI|Siat4|Siat4a|St3gal-1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding common_peak1_125_1328_-0.427903918138036_10.1621734302072_11.1789113402129 chr5 74535279 74536269 + 11.1789113402129 NA intron (NM_001159574, intron 1 of 15) CpG 292 NM_001159574 66899 Mm.272468 NM_024183 ENSMUSG00000029227 Fip1l1 1300019H17Rik|Rje FIP1 like 1 (S. cerevisiae) protein-coding common_peak2_155_1668_-0.378600167382025_10.5154681556716_11.1785983982015 chr8 122182566 122187492 + 11.1785983982015 NA Intergenic Intergenic -97112 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_49_164_0.946305289076925_7.83947485878428_11.1750307094495 chr4 123016550 123017148 + 11.1750307094495 NA intron (NM_025873, intron 1 of 10) CpG 252 NM_025873 66966 Mm.235030 NM_025873 ENSMUSG00000028653 Trit1 2310075G14Rik|AI314189|AI314635|AV099619|IPT|MOD5 tRNA isopentenyltransferase 1 protein-coding unique_peak1_13_9_2.73802434394421_4.69094026685947_11.1726710186957-2 chr6 51546083 51546486 + 11.1726710186957 NA intron (NM_028035, intron 1 of 6) intron (NM_028035, intron 1 of 6) 1761 NM_001127348 71982 Mm.294166 NM_028035 ENSMUSG00000038301 Snx10 2410004M09Rik sorting nexin 10 protein-coding unique_peak1_13_9_2.73802434394421_4.69094026685947_11.1726710186957 chr2 26487955 26488290 + 11.1726710186957 NA intron (NM_008714, intron 2 of 33) intron (NM_008714, intron 2 of 33) 15700 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak1_26_297_-0.996960953622567_7.72068804365088_11.1704805168252 chr17 5248975 5249654 + 11.1704805168252 NA intron (NM_001085355, intron 5 of 19) intron (NM_001085355, intron 5 of 19) 169453 NM_175349 106557 Mm.432764 NM_175349 ENSMUSG00000101959 Ldhal6b 4933402O15Rik|AI326310|LDHL|Ldhal lactate dehydrogenase A-like 6B protein-coding common_peak1_26_297_-0.996960953622567_7.72068804365088_11.1704805168252-2 chr3 152928396 152928998 + 11.1704805168252 NA intron (NM_012028, intron 2 of 4) intron (NM_012028, intron 2 of 4) 53510 NM_012028 26938 Mm.40915 NM_012028 ENSMUSG00000039037 St6galnac5 AI851940|Siat7e ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding unique_peak2_34_374_-0.869301070859709_8.11609624995339_11.1700298263329 chr2 48472124 48474030 + 11.1700298263329 NA Intergenic Intergenic -341032 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding common_peak2_75_787_-0.568462993686772_9.33782032261299_11.1673586216028 chr17 57010327 57012220 + 11.1673586216028 NA promoter-TSS (NM_133801) promoter-TSS (NM_133801) 15 NM_133801 98053 Mm.24632 NM_133801 ENSMUSG00000002658 Gtf2f1 2810405L04Rik|C76800|RAP74 general transcription factor IIF, polypeptide 1 protein-coding unique_peak2_32_355_-0.898413483305519_8.02652668931364_11.1646631902856 chr2 146415527 146417129 + 11.1646631902856 NA intron (NM_001033348, intron 16 of 40) intron (NM_001033348, intron 16 of 40) 95676 NM_001033348 241694 Mm.222310 NM_001033348 ENSMUSG00000037110 Ralgapa2 A230067G21Rik|AS250|BC053994|RGC2|pp250 Ral GTPase activating protein, alpha subunit 2 (catalytic) protein-coding common_peak2_62_653_-0.631537665546301_9.03737799272493_11.1643379423974 chr9 19622009 19623053 + 11.1643379423974 NA intron (NM_172918, intron 1 of 8) intron (NM_172918, intron 1 of 8) 440 NM_172918 244713 Mm.67366 NM_172918 ENSMUSG00000057551 Zfp317 4932416G03|D230022C05Rik|KRAB9|Zfp67|Zfp75|mszf40 zinc finger protein 317 protein-coding common_peak2_120_658_0.512432189627397_9.62035074982175_11.1640970336054 chr17 15395607 15396998 + 11.1640970336054 NA promoter-TSS (NM_024203) promoter-TSS (NM_024203) 56 NM_024203 67544 Mm.35039 NM_024203 ENSMUSG00000014763 Fam120b 4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838 family with sequence similarity 120, member B protein-coding unique_peak2_7_119_-1.83724964366971_5.98826577377367_11.1612020023084 chr5 108903147 108903951 + 11.1612020023084 NA Intergenic CpG -51039 NM_001104621 435864 Mm.387745 NM_001104621 ENSMUSG00000091624 Vmn2r9 EG435864 vomeronasal 2, receptor 9 protein-coding common_peak1_212_2340_-0.315615157111711_11.0351016405562_11.1608710195701 chr14 73142326 73144278 + 11.1608710195701 NA intron (NR_033185, intron 1 of 15) CpG 517 NR_033185 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak2_61_643_-0.637622362193955_9.01210569701764_11.1602706428692 chr6 127985971 127988364 + 11.1602706428692 NA intron (NM_175414, intron 3 of 8) intron (NM_175414, intron 3 of 8) 99545 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak1_60_229_0.819029400102598_8.25500475099567_11.1576567700628 chr10 67717701 67718370 + 11.1576567700628 NA Intergenic Intergenic -169080 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_15_194_-1.31107705062444_6.95179178843739_11.1558919882132 chr6 124829116 124829448 + 11.1558919882132 NA promoter-TSS (NM_013538) promoter-TSS (NM_013538) 165 NM_013700 22225 Mm.3571 NM_013700 ENSMUSG00000038429 Usp5 AA407472|ISOT|ISOT-1|Ucht ubiquitin specific peptidase 5 (isopeptidase T) protein-coding common_peak1_93_452_0.606376158566141_9.12655531932931_11.1510395223563 chr14 120910095 120911122 + 11.1510395223563 NA promoter-TSS (NM_023579) promoter-TSS (NM_023579) -586 NM_023579 70572 Mm.221452 NM_023579 ENSMUSG00000030662 Ipo5 1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5 importin 5 protein-coding common_peak2_147_1575_-0.389043545872251_10.4275300465202_11.150620074251 chr2 179975801 179977801 + 11.150620074251 NA promoter-TSS (NM_001081092) promoter-TSS (NM_001081092) -52 NR_033782 66730 Mm.31773 NR_033782 ENSMUSG00000085704 4921531C22Rik - RIKEN cDNA 4921531C22 gene ncRNA common_peak2_42_452_-0.777640069792284_8.43454720515009_11.1467921470303 chr2 121270461 121271671 + 11.1467921470303 NA intron (NM_001290830, intron 1 of 26) CpG 341 NM_001290830 27223 Mm.215389 NM_013735 ENSMUSG00000043909 Trp53bp1 53BP1|Tp53bp1|m53BP1|p53BP1 transformation related protein 53 binding protein 1 protein-coding common_peak1_13_175_-1.39947917980573_6.75969202873443_11.14564068014 chr16 43889357 43889697 + 11.14564068014 NA promoter-TSS (NM_027801) promoter-TSS (NM_027801) 149 NM_029128 106248 Mm.275354 NM_029128 ENSMUSG00000022704 Qtrtd1 3110012M05Rik|4930470H18Rik|AI648807|Qtrt2 queuine tRNA-ribosyltransferase domain containing 1 protein-coding common_peak1_99_496_0.582137772946808_9.24817092803569_11.1445106031007 chr13 67552332 67553439 + 11.1445106031007 NA promoter-TSS (NR_131099) promoter-TSS (NR_131099) 267 NM_001035231 212276 Mm.422831 NM_183145 ENSMUSG00000095432 Zfp748 KRAB-O|Rslcan20/21|Zfp208|mszf54 zinc finger protein 748 protein-coding common_peak1_126_1339_-0.42580659117109_10.1751139897596_11.14419182563 chr17 26972355 26974084 + 11.14419182563 NA promoter-TSS (NM_001005916) promoter-TSS (NM_001005916) 40 NM_001005916 474156 Mm.328890 NM_001005916 ENSMUSG00000079605 Zbtb9 3930402F13Rik zinc finger and BTB domain containing 9 protein-coding common_peak2_485_4480_0.207483899180014_12.2333469607425_11.1438096565312 chr1 133129986 133135318 + 11.1438096565312 NA exon (NM_133819, exon 1 of 2) exon (NM_133819, exon 1 of 2) 1486 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding common_peak1_115_619_0.525763531611043_9.53900617107976_11.1429397287651 chr11 78327866 78329076 + 11.1429397287651 NA promoter-TSS (NM_201406) promoter-TSS (NM_201406) 49 NM_201406 276846 Mm.295908 NM_201406 ENSMUSG00000041958 Pigs BC058979|Gm393|Gm689 phosphatidylinositol glycan anchor biosynthesis, class S protein-coding common_peak2_154_942_0.433673830937531_10.0979508761439_11.1427226681193 chr13 8995076 8997045 + 11.1427226681193 NA promoter-TSS (NM_027000) promoter-TSS (NM_027000) -48 NM_027000 69237 Mm.41800 NM_027000 ENSMUSG00000021149 Gtpbp4 2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1 GTP binding protein 4 protein-coding common_peak1_136_789_0.470628713470393_9.86102319979966_11.1413451639856 chr11 102184378 102185845 + 11.1413451639856 NA exon (NM_172947, exon 1 of 5) exon (NM_172947, exon 1 of 5) 145 NM_172947 268490 Mm.259079 NM_172947 ENSMUSG00000020922 Lsm12 1110032E16Rik|1110059P07|2600001B17Rik LSM12 homolog protein-coding common_peak2_74_319_0.708221613402305_8.67603890158851_11.1411164748565 chr14 121261230 121263470 + 11.1411164748565 NA intron (NM_134082, intron 16 of 26) intron (NM_134082, intron 16 of 26) 116880 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_50_170_0.929818262241558_7.88276164600668_11.1382505623154 chr1 170845216 170846475 + 11.1382505623154 NA intron (NM_001081304, intron 4 of 15) intron (NM_001081304, intron 4 of 15) 21926 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding unique_peak2_10_147_-1.57626793412135_6.42131939856827_11.1382410124172 chrX 50616473 50617705 + 11.1382410124172 NA intron (NR_015505, intron 3 of 19) intron (NR_015505, intron 3 of 19) 18232 NR_015505 103012 Mm.482523 NR_015505 ENSMUSG00000085396 Firre 5830467J12Rik|6720401G13Rik|AW048145 functional intergenic repeating RNA element ncRNA common_peak1_52_551_-0.692782691335056_8.76213311111064_11.1381102282089 chr13 42103056 42103983 + 11.1381102282089 NA intron (NM_007772, intron 2 of 8) intron (NM_007772, intron 2 of 8) 51498 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak1_42_126_1.05704248348179_7.51720592851306_11.1376569427302 chr7 79920358 79921065 + 11.1376569427302 NA promoter-TSS (NM_009682) promoter-TSS (NM_009682) -71 NM_009682 11778 Mm.220173 NM_009682 ENSMUSG00000063801 Ap3s2 [s]3B adaptor-related protein complex 3, sigma 2 subunit protein-coding common_peak2_107_1129_-0.466674868090243_9.90876962325743_11.1345867803647 chr5 136961565 136963040 + 11.1345867803647 NA intron (NM_025562, intron 1 of 4) intron (NM_025562, intron 1 of 4) 225 NM_025562 66437 Mm.25849 NM_025562 ENSMUSG00000019054 Fis1 2010003O14Rik|Ttc11 fission, mitochondrial 1 protein-coding common_peak1_88_924_-0.520291186639486_9.59316396208393_11.131612051673 chr13 113089466 113090643 + 11.131612051673 NA intron (NM_001281487, intron 11 of 11) intron (NM_001281487, intron 11 of 11) 10927 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak2_157_968_0.428358546884592_10.1345321288574_11.1307861664448 chr14 46831011 46832968 + 11.1307861664448 NA promoter-TSS (NM_026832) promoter-TSS (NM_026832) -255 NM_026832 68755 Mm.343809 NM_026832 ENSMUSG00000055128 Cgrrf1 1110038G02Rik|1810009H17Rik|CGR19 cell growth regulator with ring finger domain 1 protein-coding common_peak1_119_1261_-0.439615140012133_10.0816886249765_11.1301724647668 chr5 31048240 31049640 + 11.1301724647668 NA promoter-TSS (NM_001177621) promoter-TSS (NM_001177621) -16 NM_001177622 330064 Mm.205463 NM_177870 ENSMUSG00000006641 Slc5a6 E430023I20 solute carrier family 5 (sodium-dependent vitamin transporter), member 6 protein-coding common_peak1_71_745_-0.585121836009858_9.25047090225031_11.1268109742959 chr11 94653644 94654454 + 11.1268109742959 NA promoter-TSS (NM_177752) promoter-TSS (NM_177752) 258 NM_053161 94064 Mm.34951 NM_053161 ENSMUSG00000024414 Mrpl27 A630055F16Rik|D11Moh47|D18Ertd643e mitochondrial ribosomal protein L27 protein-coding unique_peak2_72_756_-0.581830463600104_9.27323425818568_11.1266175494168 chr2 13557186 13560281 + 11.1266175494168 NA Intergenic Intergenic -14069 NM_010067 13434 Mm.6979 NM_010067 ENSMUSG00000026723 Trdmt1 Dnmt2|Rnmt2 tRNA aspartic acid methyltransferase 1 protein-coding common_peak1_72_756_-0.581830463600104_9.27323425818568_11.1266175494168 chr17 6771495 6772700 + 11.1266175494168 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 10683 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak1_53_561_-0.685606442194976_8.79162309912344_11.1248982111522 chr1 52012272 52013298 + 11.1248982111522 NA intron (NM_011487, intron 2 of 23) intron (NM_011487, intron 2 of 23) 4545 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 protein-coding common_peak1_53_561_-0.685606442194976_8.79162309912344_11.1248982111522-2 chr9 124125551 124126561 + 11.1248982111522 NA 3' UTR (NM_009917, exon 2 of 2) 3' UTR (NM_009917, exon 2 of 2) 4513 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak2_123_1305_-0.431032354439413_10.1354230043267_11.1211909929077 chr7 3449459 3454047 + 11.1211909929077 NA Intergenic RMER17C2|LTR|ERVK 27091 NM_133183 54378 Mm.424047 NM_133183 ENSMUSG00000078815 Cacng6 2310033H20Rik calcium channel, voltage-dependent, gamma subunit 6 protein-coding common_peak1_37_403_-0.831234968168549_8.24259399866752_11.1211842859217 chr9 61662068 61662916 + 11.1211842859217 NA Intergenic Intergenic 252018 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding unique_peak2_37_403_-0.831234968168549_8.24259399866752_11.1211842859217 chr19 12005025 12006652 + 11.1211842859217 NA Intergenic Intergenic 30902 NM_146680 258675 Mm.271517 NM_146680 ENSMUSG00000067529 Olfr1423 MOR239-3 olfactory receptor 1423 protein-coding common_peak2_133_1416_-0.411468031581938_10.262890027127_11.1203461076765 chr17 35836191 35839047 + 11.1203461076765 NA intron (NM_011655, intron 1 of 3) intron (NM_011655, intron 1 of 3) 682 NM_011655 22154 Mm.273538 NM_011655 ENSMUSG00000001525 Tubb5 AA408537|AI596182|B130022C14Rik|M(beta)5 tubulin, beta 5 class I protein-coding common_peak2_79_353_0.676753299920492_8.80598220004324_11.1192121014898 chr2 4917004 4918474 + 11.1192121014898 NA Intergenic Intergenic -1257 NM_010726 16922 Mm.391704 NM_010726 ENSMUSG00000026664 Phyh AI256161|AI265699|Lnap1|PAHX phytanoyl-CoA hydroxylase protein-coding common_peak1_325_3757_-0.245292596312328_11.7531030532639_11.1155262830865 chr2 11169412 11173159 + 11.1155262830865 NA Intergenic Intergenic -1097 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_87_913_-0.523027989991407_9.57453636006237_11.1153926113672 chr9 111270787 111271613 + 11.1153926113672 NA promoter-TSS (NM_175266) promoter-TSS (NM_175266) 408 NM_026810 17350 Mm.486383 NM_026810 ENSMUSG00000032498 Mlh1 1110035C23Rik|AI317206|AI325952|AI561766 mutL homolog 1 protein-coding unique_peak2_16_203_-1.26888908099732_7.03798080147283_11.1149366543292 chr1 160195182 160195952 + 11.1149366543292 NA intron (NM_025474, intron 1 of 2) intron (NM_025474, intron 1 of 2) 307 NM_025474 64659 Mm.29599 NM_025474 ENSMUSG00000058267 Mrps14 1810032L21Rik|AL022847|Rpms14 mitochondrial ribosomal protein S14 protein-coding common_peak2_172_1863_-0.354975613161731_10.6866983380734_11.1092933032563 chr10 60001959 60003965 + 11.1092933032563 NA promoter-TSS (NM_001199187) promoter-TSS (NM_001199187) 150 NM_025514 52717 Mm.21793 NM_025514 ENSMUSG00000020107 Anapc16 2310005G07Rik|APC16|D10Ertd641e anaphase promoting complex subunit 16 protein-coding common_peak1_33_364_-0.881604081606852_8.07095061296395_11.1086895290486-2 chr5 124632982 124633764 + 11.1086895290486 NA intron (NM_011596, intron 2 of 19) intron (NM_011596, intron 2 of 19) 4321 NM_011596 21871 Mm.1158 NM_011596 ENSMUSG00000038023 Atp6v0a2 8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2 ATPase, H+ transporting, lysosomal V0 subunit A2 protein-coding common_peak1_33_364_-0.881604081606852_8.07095061296395_11.1086895290486 chr1 165709256 165709775 + 11.1086895290486 NA Intergenic Intergenic -1421 NM_001038846 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding unique_peak2_100_1052_-0.483441527420259_9.79856895731559_11.1059902702936 chr6 142552896 142557175 + 11.1059902702936 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 16321 NM_008428 16523 Mm.1482 NM_008428 ENSMUSG00000030247 Kcnj8 AI448900|Kir6.1|gnite|slmbr|sltr|uKATP-1 potassium inwardly-rectifying channel, subfamily J, member 8 protein-coding common_peak2_161_1736_-0.369427644531157_10.5776682164448_11.1051119361421 chr11 48816375 48818831 + 11.1051119361421 NA promoter-TSS (NM_145377) promoter-TSS (NM_145377) -212 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak1_82_860_-0.540363558228496_9.4796876482826_11.1041751885648 chr5 92491026 92492286 + 11.1041751885648 NA intron (NM_007644, intron 1 of 11) intron (NM_007644, intron 1 of 11) 14001 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding common_peak2_43_462_-0.768458329379929_8.47063921857027_11.1034734388627 chr6 136930297 136931895 + 11.1034734388627 NA intron (NM_001301308, intron 2 of 4) intron (NM_001301308, intron 2 of 4) 8431 NM_001301303 11857 Mm.2241 NM_007486 ENSMUSG00000030220 Arhgdib D4|Gdid4|Ly-GDI Rho, GDP dissociation inhibitor (GDI) beta protein-coding common_peak1_25_288_-1.01950443785975_7.66517346357081_11.103344519727 chr1 7398183 7398716 + 11.103344519727 NA Intergenic CpG 309529 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding unique_peak2_25_288_-1.01950443785975_7.66517346357081_11.103344519727 chr6 54736911 54738780 + 11.103344519727 NA Intergenic Intergenic 56221 NM_001289740 68235 Mm.233860 NM_026629 ENSMUSG00000038065 Mturn 2410066E13Rik|AI448550|B230212L03Rik maturin, neural progenitor differentiation regulator homolog (Xenopus) protein-coding common_peak1_25_288_-1.01950443785975_7.66517346357081_11.103344519727-2 chr3 55111995 55112617 + 11.103344519727 NA 5' UTR (NM_001144987, exon 1 of 9) 5' UTR (NM_001144987, exon 1 of 9) 140 NM_001144987 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding common_peak2_108_1139_-0.463075873522468_9.92328017229087_11.098392063736 chr6 136807518 136809877 + 11.098392063736 NA exon (NM_177688, exon 1 of 1) exon (NM_177688, exon 1 of 1) 449 NM_177688 232440 Mm.154564 NM_177688 ENSMUSG00000060032 H2afj E130307C13 H2A histone family, member J protein-coding common_peak2_122_1293_-0.432044120773798_10.1215998416056_11.0975115021617 chr13 21752769 21755008 + 11.0975115021617 NA promoter-TSS (NM_178183) promoter-TSS (NM_178183) 24 NM_178183 319169 Mm.370338 NM_178183 ENSMUSG00000063021 Hist1h2ak - histone cluster 1, H2ak protein-coding common_peak1_146_874_0.447871546344278_9.99707497989183_11.0967141580064 chr14 12283941 12285078 + 11.0967141580064 NA intron (NM_001284384, intron 1 of 4) CpG 306 NM_001284386 218734 Mm.44068 NM_146051 ENSMUSG00000033111 3830406C13Rik - RIKEN cDNA 3830406C13 gene protein-coding common_peak1_24_278_-1.0381061196928_7.60506825198279_11.0950517800749 chr11 87758090 87758737 + 11.0950517800749 NA Intergenic Intergenic -1458 NR_106176 102466883 NR_106176 ENSMUSG00000065420 Mir142b Gm27750|mmu-mir-142b microRNA 142b ncRNA common_peak2_223_2472_-0.305644840812944_11.1192241039835_11.0905624176932 chrX 101265901 101270441 + 11.0905624176932 NA promoter-TSS (NM_013563) promoter-TSS (NM_013563) 84 NM_001308535 16186 Mm.2923 NM_013563 ENSMUSG00000031304 Il2rg CD132|[g]c|gamma(c)|gc|p64 interleukin 2 receptor, gamma chain protein-coding common_peak1_75_786_-0.566630999737884_9.33690432563855_11.0903805416929 chr2 28582333 28583451 + 11.0903805416929 NA exon (NM_148928, exon 1 of 12) exon (NM_148928, exon 1 of 12) 387 NM_148928 70239 Mm.274120 NM_148928 ENSMUSG00000026816 Gtf3c5 2700084A09Rik|TFIIIC63|TFiiiC2-63 general transcription factor IIIC, polypeptide 5 protein-coding common_peak1_38_412_-0.817054521811586_8.28147071051365_11.0903642093968 chr4 44168386 44169113 + 11.0903642093968 NA promoter-TSS (NM_001038993) promoter-TSS (NM_001038993) -466 NM_001038993 73469 Mm.262859 NM_175201 ENSMUSG00000035696 Rnf38 1700065B19Rik|2610202O07Rik|AA673263|Oip1 ring finger protein 38 protein-coding common_peak1_19_230_-1.16061481378528_7.27144163452342_11.0897252228444 chr5 104046130 104046541 + 11.0897252228444 NA promoter-TSS (NM_028794) promoter-TSS (NM_028794) -529 NM_028794 74167 Mm.241484 NM_028794 ENSMUSG00000029310 Nudt9 1190002C07Rik|ADPR-PPase|AI462474 nudix (nucleoside diphosphate linked moiety X)-type motif 9 protein-coding common_peak2_63_662_-0.623387174614708_9.06117147280523_11.086089070394 chr11 76406652 76407861 + 11.086089070394 NA exon (NM_023355, exon 1 of 3) exon (NM_023355, exon 1 of 3) 113 NM_019818 56322 Mm.18803 NM_019818 ENSMUSG00000020843 Timm22 Tim22 translocase of inner mitochondrial membrane 22 protein-coding common_peak2_63_662_-0.623387174614708_9.06117147280523_11.086089070394-2 chr8 3676085 3677446 + 11.086089070394 NA intron (NM_025701, intron 1 of 1) intron (NM_025701, intron 1 of 1) 288 NM_025701 66682 Mm.29090 NM_025701 ENSMUSG00000040236 Trappc5 4021401A16Rik|TRS31 trafficking protein particle complex 5 protein-coding common_peak1_18_221_-1.19405166295322_7.1973900348735_11.0842951699956 chr16 24628863 24629338 + 11.0842951699956 NA intron (NM_001145952, intron 4 of 11) intron (NM_001145952, intron 4 of 11) -92755 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_54_193_0.881378176198788_8.04060193028652_11.0831621795729 chr2 19371286 19372140 + 11.0831621795729 NA promoter-TSS (NM_029619) promoter-TSS (NM_029619) 77 NM_029619 76467 Mm.27166 NM_029619 ENSMUSG00000023094 Msrb2 2310050L06Rik|Mrsb|Msrb|Pilb methionine sulfoxide reductase B2 protein-coding common_peak1_120_659_0.510244630389632_9.62144452944063_11.0799701333102 chr1 106601173 106602796 + 11.0799701333102 NA intron (NM_009741, intron 1 of 1) PB1D9|SINE|Alu -55353 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_268_2031_0.301674434796842_11.1395219041706_11.0763727881425 chr5 113991619 113994604 + 11.0763727881425 NA intron (NM_198109, intron 1 of 14) intron (NM_198109, intron 1 of 14) 646 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot homolog 1 (Drosophila) protein-coding common_peak1_578_5641_0.184948858013968_12.5544653795926_11.0717340747822 chr14 60708164 60713727 + 11.0717340747822 NA intron (NM_001033272, intron 4 of 12) intron (NM_001033272, intron 4 of 12) -21959 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding unique_peak2_21_249_-1.10598654196814_7.41279101367802_11.0708470635647 chr14 71794933 71795964 + 11.0708470635647 NA Intergenic B4A|SINE|B4 -61261 NR_046274 74667 Mm.159286 NR_046274 4930434J06Rik - RIKEN cDNA 4930434J06 gene ncRNA common_peak1_27_306_-0.975530095352253_7.77432979769405_11.0704891321529 chr16 17233521 17234107 + 11.0704891321529 NA intron (NM_178922, intron 1 of 2) CpG 227 NM_178922 58180 Mm.261602 NM_178922 ENSMUSG00000050240 Hic2 AA409108|HRG22|mKIAA1020 hypermethylated in cancer 2 protein-coding common_peak1_119_1260_-0.438471505357803_10.0811168076493_11.0693411017006 chr10 53770328 53771686 + 11.0693411017006 NA Intergenic Intergenic -20098 NM_001081428 75906 Mm.436785 NM_001081428 ENSMUSG00000019856 Fam184a 3110012E06Rik|4930438C08Rik|4930589M24Rik family with sequence similarity 184, member A protein-coding common_peak1_80_839_-0.547903434673245_9.4402938003295_11.0672747186653 chr2 29826418 29827312 + 11.0672747186653 NA promoter-TSS (NM_026615) promoter-TSS (NM_026615) -524 NM_026615 68205 Mm.20273 NM_026615 ENSMUSG00000069020 Urm1 2900073H19Rik ubiquitin related modifier 1 protein-coding common_peak1_601_5936_0.180357192937109_12.6256969942372_11.0636307320961 chr19 5724622 5728599 + 11.0636307320961 NA promoter-TSS (NM_001114595) promoter-TSS (NM_001114595) -293 NM_053252 114601 Mm.210447 NM_053252 ENSMUSG00000024937 Ehbp1l1 G430002G23Rik EH domain binding protein 1-like 1 protein-coding common_peak2_30_335_-0.925635218044453_7.92949981375653_11.0634462593799 chr5 149677994 149678844 + 11.0634462593799 NA intron (NM_001081204, intron 1 of 14) CpG 162 NM_001081204 381694 Mm.45060 NM_001081204 ENSMUSG00000051950 B3glct B3galtl|Gm1057 beta-3-glucosyltransferase protein-coding common_peak1_45_481_-0.747816220950096_8.53898122575491_11.0585357798691 chr9 124038461 124039094 + 11.0585357798691 NA Intergenic Intergenic 16806 NM_009914 12771 Mm.57050 NM_009914 ENSMUSG00000035448 Ccr3 CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3 chemokine (C-C motif) receptor 3 protein-coding common_peak2_98_1030_-0.488374153553945_9.76564154059114_11.0580953532218 chr1 85702209 85704705 + 11.0580953532218 NA intron (NM_013673, intron 17 of 19) RLTR53B_Mm|LTR|ERVK 33149 NM_177055 319997 Mm.116691 NM_177055 ENSMUSG00000052760 A630001G21Rik - RIKEN cDNA A630001G21 gene protein-coding common_peak1_33_82_1.2551091408136_7.00259400175373_11.0576235730052 chr18 80699417 80700066 + 11.0576235730052 NA intron (NM_198429, intron 1 of 9) intron (NM_198429, intron 1 of 9) 8432 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_43_132_1.03112761837912_7.57084624469075_11.057577555702 chr6 87152445 87153558 + 11.057577555702 NA intron (NM_054041, intron 17 of 17) intron (NM_054041, intron 17 of 17) 48255 NM_001167937 52372 Mm.282851 NM_001167937 ENSMUSG00000090891 D6Ertd527e AU043841 DNA segment, Chr 6, ERATO Doi 527, expressed protein-coding common_peak1_254_2853_-0.282993255469986_11.3372729917408_11.0543074038928 chr7 126501673 126503939 + 11.0543074038928 NA intron (NM_183020, intron 1 of 22) CpG 496 NM_183020 233871 Mm.231450 NM_183020 ENSMUSG00000032637 Atxn2l A2D|A2LG|A2RP|A2lp|Atxnl2 ataxin 2-like protein-coding common_peak1_160_995_0.421994981290897_10.1709994227135_11.0539931022288 chr16 10991724 10993322 + 11.0539931022288 NA intron (NM_019980, intron 1 of 3) CpG 598 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding unique_peak2_2_69_-2.79534448241194_4.731610775739_11.0504467020443 chr2 75791840 75792405 + 11.0504467020443 NA Intergenic L1MC5|LINE|L1 -40055 NM_172666 228061 Mm.31227 NM_172666 ENSMUSG00000042410 Agps 5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2 alkylglycerone phosphate synthase protein-coding unique_peak2_22_259_-1.08390700893494_7.48041430856098_11.0492513111221 chr19 31210022 31211662 + 11.0492513111221 NA intron (NM_011160, intron 3 of 17) (CA)n|Simple_repeat|Simple_repeat 5554 NR_002849 78103 Mm.445198 NR_002849 8430431K14Rik - RIKEN cDNA 8430431K14 gene ncRNA common_peak1_48_159_0.954948142023322_7.79940216589902_11.0483025842735 chr17 52146612 52147366 + 11.0483025842735 NA Intergenic Intergenic 264262 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA common_peak1_72_755_-0.579923397835444_9.27228072530335_11.0482403602629 chr7 28982082 28983367 + 11.0482403602629 NA promoter-TSS (NM_028659) promoter-TSS (NM_028659) -130 NM_008279 26411 Mm.148278 NM_008279 ENSMUSG00000037337 Map4k1 Hpk1|mHPK1 mitogen-activated protein kinase kinase kinase kinase 1 protein-coding unique_peak1_16_17_2.23361125953186_5.28673063120824_11.04711238282 chr12 102334270 102334790 + 11.04711238282 NA intron (NM_001161365, intron 3 of 9) MLT1A1|LTR|ERVL-MaLR 50889 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_246_1808_0.318392425850483_10.9801729055465_11.046851999213 chr8 25199796 25202494 + 11.046851999213 NA exon (NM_199323, exon 1 of 11) exon (NM_199323, exon 1 of 11) 397 NM_199323 320165 Mm.308452 NM_177089 ENSMUSG00000065954 Tacc1 4833447E04Rik|AA960202|B230378H13Rik transforming, acidic coiled-coil containing protein 1 protein-coding common_peak1_521_4925_0.197343745506531_12.3648727852522_11.0451696544355 chr7 83653330 83657383 + 11.0451696544355 NA exon (NM_010551, exon 13 of 19) exon (NM_010551, exon 13 of 19) 23339 NM_023377 170460 Mm.357953 NM_023377 ENSMUSG00000046027 Stard5 2310058G22Rik|AI607880|D7Ertd152e StAR-related lipid transfer (START) domain containing 5 protein-coding common_peak1_180_1175_0.389534970639998_10.3944398301564_11.0436143556453 chr7 31032788 31035133 + 11.0436143556453 NA intron (NM_001287213, intron 8 of 8) intron (NM_001287213, intron 8 of 8) 6357 NR_106017 102465635 NR_106017 ENSMUSG00000098783 Mir7050 Gm27578|mmu-mir-7050 microRNA 7050 ncRNA common_peak1_20_240_-1.13541469243146_7.34518199001423_11.0416063336511-2 chr16 93710997 93711556 + 11.0416063336511 NA promoter-TSS (NM_027293) promoter-TSS (NM_027293) -631 NM_026700 70028 Mm.23230 NM_026700 ENSMUSG00000022946 Dopey2 0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933 dopey family member 2 protein-coding unique_peak2_20_240_-1.13541469243146_7.34518199001423_11.0416063336511 chr1 134962372 134963389 + 11.0416063336511 NA intron (NM_026024, intron 1 of 6) intron (NM_026024, intron 1 of 6) 315 NM_001278115 67196 Mm.284587 NM_026024 ENSMUSG00000026429 Ube2t 2700084L22Rik|C80607 ubiquitin-conjugating enzyme E2T protein-coding common_peak1_20_240_-1.13541469243146_7.34518199001423_11.0416063336511 chr12 116282591 116283097 + 11.0416063336511 NA intron (NM_028731, intron 1 of 21) intron (NM_028731, intron 1 of 21) 1622 NM_028731 52635 Mm.273755 NM_028731 ENSMUSG00000021171 Esyt2 2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b extended synaptotagmin-like protein 2 protein-coding common_peak1_44_137_1.01765418078646_7.6173515471714_11.0409730649166 chr2 5063496 5064236 + 11.0409730649166 NA promoter-TSS (NM_181848) promoter-TSS (NM_181848) 72 NM_181848 71648 Mm.116942 NM_181848 ENSMUSG00000026672 Optn 4930441O07Rik|FIP2|HYPL|NRP optineurin protein-coding common_peak2_632_8021_-0.165012395522263_12.8872400530534_11.0376781753353 chr10 61294867 61305025 + 11.0376781753353 NA 5' UTR (NM_011073, exon 2 of 3) 5' UTR (NM_011073, exon 2 of 3) 2110 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding unique_peak2_94_987_-0.499897441309466_9.69841851092994_11.0363147095112 chr5 139379741 139383688 + 11.0363147095112 NA intron (NM_030258, intron 1 of 1) intron (NM_030258, intron 1 of 1) 1047 NM_030258 80290 Mm.270003 NM_030258 ENSMUSG00000044197 Gpr146 BC003323|PGR8 G protein-coupled receptor 146 protein-coding unique_peak1_28_60_1.41792597694968_6.63970032603773_11.0343891098557 chr11 6178889 6179478 + 11.0343891098557 NA intron (NM_173748, intron 2 of 5) intron (NM_173748, intron 2 of 5) -5852 NR_029471 100042173 Mm.441799 NR_029471 Rps15a-ps6 Gm11968|OTTMUSG00000005107 ribosomal protein S15A, pseudogene 6 pseudo common_peak1_107_558_0.548727716369116_9.40106833102775_11.0334243939113 chr6 65671626 65672948 + 11.0334243939113 NA intron (NM_172399, intron 1 of 3) CpG 676 NM_172399 68169 Mm.52392 NM_172399 ENSMUSG00000049001 Ndnf A930038C07Rik|epidermacan neuron-derived neurotrophic factor protein-coding unique_peak1_25_48_1.54071140052572_6.38506554437807_11.0330187747004 chr2 65793800 65794330 + 11.0330187747004 NA Intergenic MTE-int|LTR|ERVL-MaLR -51702 NM_001290666 77771 Mm.102025 NM_153409 ENSMUSG00000044647 Csrnp3 A330102K23Rik|CSRNP-3|Csnrp3|Mbu1|taip-2 cysteine-serine-rich nuclear protein 3 protein-coding common_peak1_153_935_0.432969132376018_10.0868492857714_11.029868730392 chr8 125083270 125084775 + 11.029868730392 NA intron (NM_174853, intron 1 of 11) intron (NM_174853, intron 1 of 11) 29827 NM_174854 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding common_peak2_555_5351_0.189347002523853_12.4805359019034_11.0296841239177 chr6 119196919 119202975 + 11.0296841239177 NA intron (NM_001033379, intron 4 of 8) intron (NM_001033379, intron 4 of 8) -3538 NM_001255999 12288 Mm.41628 NM_009781 ENSMUSG00000051331 Cacna1c Cav1.2|Cchl1a1|D930026N18Rik|MBC|MELC-CC calcium channel, voltage-dependent, L type, alpha 1C subunit protein-coding unique_peak2_6_109_-1.94801958587944_5.80734992058494_11.0288856885205 chrX 104348153 104348515 + 11.0288856885205 NA intron (NM_009592, intron 1 of 15) CpG 65512 NM_009592 11306 Mm.426128 NM_009592 ENSMUSG00000031333 Abcb7 AA517758|AU019072|Abc7 ATP-binding cassette, sub-family B (MDR/TAP), member 7 protein-coding common_peak2_77_807_-0.558655721957578_9.37888362177301_11.0257247357372 chrX 130548540 130550447 + 11.0257247357372 NA Intergenic Intergenic 799751 NM_172493 54004 Mm.10763 NM_017398 ENSMUSG00000034480 Diaph2 Dia3|Diap2|Drf2|E430022I22Rik diaphanous related formin 2 protein-coding common_peak1_74_320_0.703720221167364_8.67828959770598_11.0210472716966 chr8 117537078 117538567 + 11.0210472716966 NA intron (NM_172285, intron 2 of 32) intron (NM_172285, intron 2 of 32) 39531 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak2_310_2473_0.274469606157695_11.4098645880552_11.0200121730714 chr13 51791004 51794483 + 11.0200121730714 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 1004 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_55_580_-0.669217292200248_8.84778570730441_11.0164486499894 chr10 67606715 67607758 + 11.0164486499894 NA Intergenic Intergenic -58281 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak2_37_402_-0.827659513944721_8.24080627155561_11.0143842060297 chr17 45506684 45507434 + 11.0143842060297 NA exon (NM_198608, exon 1 of 22) exon (NM_198608, exon 1 of 22) 218 NM_198608 224805 Mm.329063 NM_198608 ENSMUSG00000023938 Aars2 Aarsl|AlaRS|Gm89 alanyl-tRNA synthetase 2, mitochondrial protein-coding common_peak1_75_785_-0.564796676489003_9.3359871640141_11.0136252389811 chr19 57123358 57124496 + 11.0136252389811 NA intron (NM_001290813, intron 6 of 20) intron (NM_001290813, intron 6 of 20) -4903 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_85_890_-0.526942140081617_9.53581055148111_11.0130239429052 chr17 46781768 46783586 + 11.0130239429052 NA promoter-TSS (NM_025433) promoter-TSS (NM_025433) -21 NM_025433 66229 Mm.218533 NM_025433 ENSMUSG00000063888 Rpl7l1 1500016H10Rik ribosomal protein L7-like 1 protein-coding common_peak2_250_1849_0.314487925410324_11.0105535181088_11.0123989358591 chr19 29250556 29254578 + 11.0123989358591 NA intron (NM_008413, intron 2 of 24) intron (NM_008413, intron 2 of 24) 764 NM_008413 16452 Mm.275839 NM_008413 ENSMUSG00000024789 Jak2 Fd17 Janus kinase 2 protein-coding common_peak2_95_468_0.593555977949432_9.17022210149009_11.0119002131721 chr15 84324145 84325968 + 11.0119002131721 NA intron (NM_022321, intron 1 of 12) intron (NM_022321, intron 1 of 12) 336 NM_022321 64099 Mm.251356 NM_022321 ENSMUSG00000022439 Parvg AI413459 parvin, gamma protein-coding unique_peak1_23_40_1.65622346347401_6.18566373635509_11.0107184648876 chr6 15625943 15626326 + 11.0107184648876 NA Intergenic Intergenic -94527 NM_175088 16543 Mm.1314 NM_175088 ENSMUSG00000041390 Mdfic Kdt1|Mdfid MyoD family inhibitor domain containing protein-coding common_peak1_23_40_1.65622346347401_6.18566373635509_11.0107184648876 chr3 93595114 93595653 + 11.0107184648876 NA Intergenic Intergenic 40266 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding unique_peak1_24_44_1.59416209580671_6.28893414423303_11.0105876003273 chr8 69945604 69946198 + 11.0105876003273 NA intron (NM_001286450, intron 2 of 12) B1_Mur1|SINE|Alu 28482 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak2_227_2519_-0.301484676464392_11.1484656801551_11.0100263304436 chr16 32077326 32080007 + 11.0100263304436 NA intron (NM_177326, intron 1 of 14) intron (NM_177326, intron 1 of 14) 676 NM_177326 224105 Mm.234204 NM_177326 ENSMUSG00000022781 Pak2 5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182 p21 protein (Cdc42/Rac)-activated kinase 2 protein-coding common_peak2_181_1967_-0.343557151432837_10.7707359296228_11.0078811545509 chrX 7840439 7843172 + 11.0078811545509 NA promoter-TSS (NM_138604) promoter-TSS (NM_138604) -26 NM_001290536 54644 Mm.142827 NM_138604 ENSMUSG00000031154 Otud5 AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7 OTU domain containing 5 protein-coding common_peak1_84_389_0.644311534102881_8.92948608080105_11.0056671984926 chr9 110684426 110685923 + 11.0056671984926 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 28671 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_121_1281_-0.433048784385413_10.107656154426_11.0042692461124 chr14 64730717 64732187 + 11.0042692461124 NA intron (NM_001081177, intron 10 of 39) intron (NM_001081177, intron 10 of 39) 78921 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak1_43_461_-0.765338987535751_8.46907954764818_11.0036719073454 chr2 15048612 15049325 + 11.0036719073454 NA exon (NM_028950, exon 1 of 11) exon (NM_028950, exon 1 of 11) 344 NM_001165942 74455 Mm.478923 NM_028950 ENSMUSG00000026707 Nsun6 4933403D21Rik|4933414E04Rik|NOPD1 NOL1/NOP2/Sun domain family member 6 protein-coding common_peak1_15_193_-1.30365957906196_6.94808305265615_11.00354776941-2 chr6 125191221 125191689 + 11.00354776941 NA promoter-TSS (NM_025595) promoter-TSS (NM_025595) 131 NM_146171 68298 Mm.257590 NM_146171 ENSMUSG00000038252 Ncapd2 2810406C15Rik|2810465G24Rik|CAP-D2|CNAP1|mKIAA0159 non-SMC condensin I complex, subunit D2 protein-coding common_peak1_15_193_-1.30365957906196_6.94808305265615_11.00354776941 chr14 55682174 55682549 + 11.00354776941 NA promoter-TSS (NM_145705) promoter-TSS (NM_145705) -544 NM_145705 28113 Mm.29346 NM_145705 ENSMUSG00000007589 Tinf2 AW552114|D14Wsu146e|Tin2 Terf1 (TRF1)-interacting nuclear factor 2 protein-coding common_peak1_654_6628_0.170617311199203_12.7798841931256_11.0018597453585 chr5 37048837 37053404 + 11.0018597453585 NA intron (NM_178394, intron 1 of 12) ORR1E|LTR|ERVL-MaLR 263 NM_178394 76071 Mm.85280 NM_178394 ENSMUSG00000063646 Jakmip1 5830437M04Rik|C330021K24Rik|Gababrbp|Marlin-1 janus kinase and microtubule interacting protein 1 protein-coding common_peak1_125_1325_-0.424643588974449_10.1605432656254_11.0010713320825 chr13 38036686 38038043 + 11.0010713320825 NA promoter-TSS (NM_027724) promoter-TSS (NM_027724) 375 NM_024242 71340 Mm.297130 NM_024242 ENSMUSG00000021428 Riok1 3110046C13Rik|5430416A05Rik|Ad034 RIO kinase 1 (yeast) protein-coding common_peak2_109_1148_-0.458259753073841_9.93703320610919_10.9996078759158 chr19 5963325 5965598 + 10.9996078759158 NA promoter-TSS (NM_001164057) promoter-TSS (NM_001164057) -255 NM_008893 18969 Mm.209931 NM_008893 ENSMUSG00000024833 Pola2 AI573378 polymerase (DNA directed), alpha 2 protein-coding common_peak1_273_2084_0.297118199389191_11.1743907680266_10.9989578444595 chr1 52231673 52233945 + 10.9989578444595 NA exon (NM_001081081, exon 1 of 18) exon (NM_001081081, exon 1 of 18) 423 NM_001081081 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding unique_peak2_31_344_-0.907586977354008_7.97665906298853_10.9967402867543 chr9 106770895 106772787 + 10.9967402867543 NA intron (NM_030730, intron 1 of 21) intron (NM_030730, intron 1 of 21) 17372 NM_030730 81000 Mm.246689 NM_030730 ENSMUSG00000040661 Rad54l2 Arip4|D130058C05|G630026H09Rik|Srisnf2l RAD54 like 2 (S. cerevisiae) protein-coding common_peak2_33_363_-0.877646068038169_8.06897160617961_10.9965049583429 chr5 149228691 149229804 + 10.9965049583429 NA Intergenic CpG -35757 NM_001308462 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding common_peak2_44_470_-0.753404612048152_8.50288094358871_10.9951812342064 chr5 121397176 121398929 + 10.9951812342064 NA promoter-TSS (NM_172722) promoter-TSS (NM_172722) 70 NM_172722 231713 Mm.33919 NM_172722 ENSMUSG00000042719 Naa25 4833422K13Rik|A630046C11|AI450868|C330023M02Rik|Mdm20 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding common_peak1_467_4267_0.210958127309432_12.1648235244791_10.9929008417234 chr11 22842088 22847331 + 10.9929008417234 NA intron (NM_001169114, intron 1 of 1) intron (NM_001169114, intron 1 of 1) 15026 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak1_95_997_-0.495895914872452_9.71494804790103_10.989718308708 chr14 10453013 10454222 + 10.989718308708 NA promoter-TSS (NM_001308286) promoter-TSS (NM_001308286) -159 NM_001308286 14198 Mm.397619 NM_010210 ENSMUSG00000060579 Fhit AW045638|Fra14A2 fragile histidine triad gene protein-coding common_peak2_103_528_0.561521954899618_9.32788488956384_10.9864655409 chr17 45751018 45752905 + 10.9864655409 NA Intergenic MIR|SINE|MIR -18117 NM_028164 72240 Mm.482897 NM_028164 ENSMUSG00000094690 1600014C23Rik - RIKEN cDNA 1600014C23 gene protein-coding unique_peak2_13_174_-1.39125867300076_6.75558177533195_10.9857326722679-2 chr5 137683984 137684821 + 10.9857326722679 NA exon (NM_178162, exon 1 of 12) exon (NM_178162, exon 1 of 12) 351 NM_001303266 231801 Mm.260869 NM_145566 ENSMUSG00000029722 Agfg2 A630095P14Rik|Hrbl|RAB-R|RABR ArfGAP with FG repeats 2 protein-coding unique_peak2_13_174_-1.39125867300076_6.75558177533195_10.9857326722679 chr5 136457970 136459382 + 10.9857326722679 NA intron (NM_198602, intron 2 of 22) intron (NM_198602, intron 2 of 22) -82873 NR_030500 723975 NR_030500 ENSMUSG00000106479 Mir721 Mirn721|miRY|mir-721|mmu-mir-721 microRNA 721 ncRNA common_peak1_307_2442_0.275508014878522_11.3921921557065_10.984588956835 chr4 40267710 40270531 + 10.984588956835 NA promoter-TSS (NR_045265) promoter-TSS (NR_045265) -459 NR_045265 100504309 Mm.392019 NR_045265 Toporsos 2010003O02Rik topoisomerase I binding, arginine/serine-rich, opposite strand ncRNA common_peak1_59_621_-0.645502026346543_8.95801975695733_10.9844484696963 chr5 105138867 105139603 + 10.9844484696963 NA intron (NM_008620, intron 1 of 10) intron (NM_008620, intron 1 of 10) 317 NM_008620 17472 Mm.440525 NM_008620 ENSMUSG00000079363 Gbp4 AW228052|Mag-2|Mpa-2|Mpa2 guanylate binding protein 4 protein-coding unique_peak1_12_7_2.92880893345458_4.46440446672729_10.9812698525472-2 chr9 54639239 54639604 + 10.9812698525472 NA intron (NM_053178, intron 2 of 13) intron (NM_053178, intron 2 of 13) 22464 NM_053178 94180 Mm.20592 NM_053178 ENSMUSG00000032281 Acsbg1 BG1|Bgm|E230019G03Rik|GR-LACS|Lpd|R75185 acyl-CoA synthetase bubblegum family member 1 protein-coding unique_peak1_12_7_2.92880893345458_4.46440446672729_10.9812698525472 chr4 49197097 49197473 + 10.9812698525472 NA intron (NM_178756, intron 1 of 7) intron (NM_178756, intron 1 of 7) 137823 NM_178756 272031 Mm.299460 NM_178756 ENSMUSG00000063446 Plppr1 E130309F12Rik|Lppr1|PRG-3|mKIAA4247 phospholipid phosphatase related 1 protein-coding unique_peak2_28_315_-0.955117433664534_7.82622203134484_10.9812373040234 chr18 50016192 50018113 + 10.9812373040234 NA intron (NM_001177759, intron 1 of 1) intron (NM_001177759, intron 1 of 1) -36130 NM_134131 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding common_peak2_321_3702_-0.245869609626292_11.7315440293585_10.9800380847383 chr5 137784990 137788266 + 10.9800380847383 NA promoter-TSS (NM_144913) promoter-TSS (NM_144913) 73 NM_144913 231803 Mm.61193 NM_144913 ENSMUSG00000029726 Mepce Bcdin3|D5Wsu46e methylphosphate capping enzyme protein-coding common_peak2_132_758_0.475944237246894_9.80592819403891_10.9797667546182 chr5 108311917 108313523 + 10.9797667546182 NA promoter-TSS (NM_001081234) promoter-TSS (NM_001081234) -205 NM_001310689 433931 Mm.319881 NM_001081234 ENSMUSG00000029263 Pigg Gpi7 phosphatidylinositol glycan anchor biosynthesis, class G protein-coding unique_peak1_19_26_1.93624672546731_5.72301086489712_10.9793679995884 chr1 120251139 120251578 + 10.9793679995884 NA intron (NM_001085409, intron 2 of 5) intron (NM_001085409, intron 2 of 5) 13922 NM_133186 68428 Mm.181033 NM_133186 ENSMUSG00000026389 Steap3 1010001D01Rik|Tsap6|pHyde STEAP family member 3 protein-coding unique_peak1_19_26_1.93624672546731_5.72301086489712_10.9793679995884-3 chr16 94222567 94223006 + 10.9793679995884 NA intron (NM_139145, intron 5 of 9) Lx5c|LINE|L1 65070 NM_139145 110948 Mm.30921 NM_139145 ENSMUSG00000040820 Hlcs 410I21.SP6|D16Jhu34 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) protein-coding unique_peak1_19_26_1.93624672546731_5.72301086489712_10.9793679995884-2 chr13 94057479 94057905 + 10.9793679995884 NA promoter-TSS (NM_172589) promoter-TSS (NM_172589) -104 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak1_49_520_-0.712512058955767_8.66888353280062_10.9792415950539 chr9 13303587 13304393 + 10.9792415950539 NA Intergenic Intergenic 57011 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding unique_peak1_17_20_2.11236793909391_5.44850139232571_10.977875483546 chr13 74166712 74167107 + 10.977875483546 NA TTS (NM_001081060) TTS (NM_001081060) 41791 NM_177333 211446 Mm.261859 NM_177333 ENSMUSG00000034152 Exoc3 2810050O03Rik|E430013E20Rik|Sec6|Sec6l1 exocyst complex component 3 protein-coding unique_peak2_25_287_-1.01450375680138_7.66267312304162_10.9776499521135 chr12 33433431 33434998 + 10.9776499521135 NA intron (NM_172253, intron 2 of 3) MTEa|LTR|ERVL-MaLR 4590 NM_172253 28071 Mm.196472 NM_172253 ENSMUSG00000020561 Twistnb 2410173G11|2810024J17Rik|D16Wsu83e twist basic helix-loop-helix transcription factor 1 neighbor protein-coding common_peak2_134_1425_-0.407445112725974_10.2740357100809_10.9762782369726 chrY 90783100 90785058 + 10.9762782369726 NA Intergenic Intergenic -1363 NM_133362 170942 Mm.76062 NM_133362 ENSMUSG00000096768 Erdr1 edr erythroid differentiation regulator 1 protein-coding common_peak1_143_850_0.451506973745772_9.95876880855885_10.9750322431702 chr14 75183965 75186089 + 10.9750322431702 NA intron (NM_008879, intron 2 of 16) B2_Mm2|SINE|B2 48602 NM_008879 18826 Mm.153911 NM_008879 ENSMUSG00000021998 Lcp1 AW536232|D14Ertd310e|LCP-1|Pls2|pp65 lymphocyte cytosolic protein 1 protein-coding common_peak2_177_1919_-0.347259915657974_10.7332606377795_10.9748866455498 chr14 66867148 66870184 + 10.9748866455498 NA promoter-TSS (NM_009955) promoter-TSS (NM_009955) -66 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding common_peak1_209_1447_0.35234665477997_10.6760192144732_10.9743877960467 chr6 88901578 88903140 + 10.9743877960467 NA 5' UTR (NM_011906, exon 1 of 12) 5' UTR (NM_011906, exon 1 of 12) 108 NM_011906 24100 Mm.284480 NM_011906 ENSMUSG00000002871 Tpra1 40kDa|Gpr175|Tpra40 transmembrane protein, adipocyte asscociated 1 protein-coding common_peak2_108_1137_-0.460542606776945_9.92201353891811_10.9707727320052 chr19 8888036 8889769 + 10.9707727320052 NA promoter-TSS (NR_027866) promoter-TSS (NR_027866) 19 NR_104416 66276 Mm.27503 NM_025463 ENSMUSG00000071653 1810009A15Rik - RIKEN cDNA 1810009A15 gene protein-coding common_peak1_83_869_-0.53417232456488_9.49778542845365_10.9703849494346 chrX 20290561 20292050 + 10.9703849494346 NA intron (NM_177353, intron 1 of 16) intron (NM_177353, intron 1 of 16) 459 NM_177353 236727 Mm.132983 NM_177353 ENSMUSG00000037341 Slc9a7 A530087D17Rik|NHE7 solute carrier family 9 (sodium/hydrogen exchanger), member 7 protein-coding unique_peak2_7_118_-1.82517681136913_5.98222935762338_10.9697240105432 chr4 42650202 42651187 + 10.9697240105432 NA promoter-TSS (NM_001199962).2 promoter-TSS (NM_001199962).2 90 NM_001267702 100861978 Mm.6660 NM_001267702 ENSMUSG00000095247 LOC100861978 - c-C motif chemokine 27-like protein-coding common_peak1_16_202_-1.261799656211_7.03443608907967_10.9661197025037 chr8 104591292 104591870 + 10.9661197025037 NA 5' UTR (NM_001024606, exon 1 of 2) 5' UTR (NM_001024606, exon 1 of 2) 113 NM_001024606 382051 Mm.290750 NM_001024606 ENSMUSG00000048371 Pdp2 4833426J09Rik|Gm1705|mKIAA1348 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding common_peak2_313_2507_0.271766312789968_11.428204789197_10.9658925327432 chr5 148397943 148400858 + 10.9658925327432 NA intron (NM_007513, intron 1 of 12) CpG 504 NM_007513 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding unique_peak1_27_56_1.45367473585318_6.55972738209133_10.962153415176 chr2 132102851 132103538 + 10.962153415176 NA intron (NM_018824, intron 1 of 15) intron (NM_018824, intron 1 of 15) 41914 NM_018824 54338 Mm.103581 NM_018824 ENSMUSG00000027340 Slc23a2 AI844736|NBTL1|SVCT2|Slc23a1|YSPL2|YSPL3|mKIAA0238 solute carrier family 23 (nucleobase transporters), member 2 protein-coding common_peak1_27_56_1.45367473585318_6.55972738209133_10.962153415176 chr18 32969740 32970231 + 10.962153415176 NA intron (NM_009793, intron 1 of 10) intron (NM_009793, intron 1 of 10) 30944 NM_009793 12326 Mm.222329 NM_009793 ENSMUSG00000038128 Camk4 A430110E23Rik|AI666733|CaMKIV|CaMKIV/Gr|D18Bwg0362e calcium/calmodulin-dependent protein kinase IV protein-coding common_peak1_105_1104_-0.467476577649325_9.87609236545413_10.9618313319702 chr10 121364611 121366170 + 10.9618313319702 NA intron (NM_029364, intron 1 of 13) CpG 300 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding common_peak1_105_1104_-0.467476577649325_9.87609236545413_10.9618313319702-2 chr11 88160411 88161636 + 10.9618313319702 NA intron (NM_198013, intron 1 of 10) B3A|SINE|B2 -8542 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_455_4124_0.214157249088702_12.1172570285649_10.9602990871454 chr13 20089720 20095698 + 10.9602990871454 NA intron (NM_080288, intron 1 of 21) L2a|LINE|L2 2202 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding unique_peak1_18_23_2.01540170267573_5.59266335205902_10.9594784018572 chr1 60531761 60532167 + 10.9594784018572 NA intron (NM_001045513, intron 2 of 13) intron (NM_001045513, intron 2 of 13) 34801 NM_001045513 77300 Mm.440325 NM_001045513 ENSMUSG00000026014 Raph1 9430025M21Rik|C730009O10Rik|Lpd Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding common_peak1_70_294_0.728588401597813_8.56886534504811_10.9582041618164 chr1 4785081 4785940 + 10.9582041618164 NA intron (NM_025300, intron 1 of 4) CpG 216 NR_033530 27395 Mm.182927 NM_025300 ENSMUSG00000033845 Mrpl15 HSPC145|MRP-L7|Rpml7 mitochondrial ribosomal protein L15 protein-coding unique_peak2_3_78_-2.46075210742465_5.07340469446478_10.956480990312 chr12 79650201 79650823 + 10.956480990312 NA intron (NM_009014, intron 7 of 10) Lx8|LINE|L1 274221 NR_131075 77290 Mm.395042 NR_131073 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak1_70_733_-0.586476706996196_9.22639789934512_10.951916602659 chr13 113090845 113091835 + 10.951916602659 NA TTS (NM_001281487) TTS (NM_001281487) 9641 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak1_211_1466_0.350313232142435_10.6938097717446_10.9512242236704 chr12 55397960 55399895 + 10.9512242236704 NA exon (NM_011968, exon 1 of 7) exon (NM_011968, exon 1 of 7) 102 NM_011968 26443 Mm.30210 NM_011968 ENSMUSG00000021024 Psma6 IOTA proteasome (prosome, macropain) subunit, alpha type 6 protein-coding common_peak2_161_1733_-0.3669337890426_10.5764212887005_10.9499397727762 chr14 50923678 50925709 + 10.9499397727762 NA promoter-TSS (NM_009687) promoter-TSS (NM_009687) 200 NM_133676 66246 Mm.274791 NM_133676 ENSMUSG00000006289 Osgep 1500019L24Rik|GCPL-1|PRSMG1 O-sialoglycoprotein endopeptidase protein-coding common_peak1_34_372_-0.861586105731703_8.11223876738939_10.9484084554195-2 chr4 151933575 151934266 + 10.9484084554195 NA intron (NM_172704, intron 1 of 15) CpG 200 NM_172704 230935 Mm.21353 NM_172704 ENSMUSG00000039768 Dnajc11 E030019A03Rik DnaJ heat shock protein family (Hsp40) member C11 protein-coding common_peak1_34_372_-0.861586105731703_8.11223876738939_10.9484084554195 chr14 103469487 103470143 + 10.9484084554195 NA Intergenic Intergenic -43526 NM_022886 64929 Mm.244003 NM_022886 ENSMUSG00000022123 Scel 9230114I02Rik sciellin protein-coding common_peak1_274_2095_0.295973603726786_11.1814098034008_10.9483613339813 chr9 107551149 107552834 + 10.9483613339813 NA TTS (NM_053253) TTS (NM_053253) 436 NM_001243748 56289 Mm.12091 NM_019713 ENSMUSG00000010067 Rassf1 123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family member 1 protein-coding common_peak2_185_2013_-0.338418935932838_10.8066385000404_10.9476891367466 chr9 41071725 41075613 + 10.9476891367466 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) -69041 NM_019465 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak1_135_1436_-0.405471151924095_10.2861087704953_10.9475467498948 chr3 79152356 79154331 + 10.9475467498948 NA Intergenic Intergenic -7468 NM_001099624 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak2_17_211_-1.22323509269053_7.11630290821793_10.9463566821594 chr1 136259800 136261136 + 10.9463566821594 NA exon (NM_001101516, exon 1 of 1) exon (NM_001101516, exon 1 of 1) 405 NM_001101516 383563 Mm.40367 NM_001101516 ENSMUSG00000052759 Gpr25 Gm1300 G protein-coupled receptor 25 protein-coding common_peak2_348_2890_0.253747403787218_11.6242265953707_10.9459299392856 chr8 126831432 126835006 + 10.9459299392856 NA Intergenic Intergenic 112702 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak2_53_188_0.886577453804878_8.00553115112351_10.945695916886 chr17 17587376 17588373 + 10.945695916886 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 36615 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_53_188_0.886577453804878_8.00553115112351_10.945695916886 chr7 63816246 63817245 + 10.945695916886 NA Intergenic Intergenic -100112 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak1_151_919_0.434711086011582_10.0628455939502_10.9451671953079 chr5 124111371 124113110 + 10.9451671953079 NA promoter-TSS (NM_025671) promoter-TSS (NM_025671) -98 NM_025671 66627 Mm.7050 NM_025671 ENSMUSG00000023707 Ogfod2 1300006G11Rik|5730405M13Rik|AU041636|AW552395 2-oxoglutarate and iron-dependent oxygenase domain containing 2 protein-coding common_peak1_76_334_0.688704255427931_8.7323694130591_10.9442043029811 chr18 24529325 24530252 + 10.9442043029811 NA intron (NM_144861, intron 1 of 6) CpG 416 NM_144861 225283 Mm.28427 NM_144861 ENSMUSG00000040446 Rprd1a C77387|mKIAA4077 regulation of nuclear pre-mRNA domain containing 1A protein-coding common_peak1_51_540_-0.697451227999528_8.73075916982705_10.944204302981-2 chr2 25153908 25154980 + 10.944204302981 NA Intergenic Intergenic -26314 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak1_51_540_-0.697451227999528_8.73075916982705_10.944204302981 chr16 36875068 36875632 + 10.944204302981 NA promoter-TSS (NM_134111) promoter-TSS (NM_134111) -524 NM_134111 106389 Mm.432078 NM_134111 ENSMUSG00000022838 Eaf2 AW048865|FESTA-L|FESTA-S|Festa|Traits|U19 ELL associated factor 2 protein-coding common_peak1_131_1391_-0.412398925815138_10.2367440329412_10.9423846442439 chr1 181245921 181247512 + 10.9423846442439 NA Intergenic MLTR14|LTR|ERV1 -34738 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak1_144_1538_-0.39100861493732_10.3922732088595_10.941941707488 chr2 181519890 181521303 + 10.941941707488 NA non-coding (NR_073369, exon 1 of 6) non-coding (NR_073369, exon 1 of 6) 111 NM_001271584 13002 Mm.140761 NM_016775 ENSMUSG00000000826 Dnajc5 2610314I24Rik|AU018536|Csp DnaJ heat shock protein family (Hsp40) member C5 protein-coding common_peak2_700_7242_0.162930499070297_12.9038369094985_10.939690708988 chr6 128759485 128771934 + 10.939690708988 NA Intergenic LTRIS_Mus|LTR|ERV1 22932 NM_008527 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak1_32_353_-0.890285602422117_8.02246274887194_10.9373903472773 chr4 43971669 43972267 + 10.9373903472773 NA intron (NM_027450, intron 4 of 4) B4A|SINE|B4 -11536 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding common_peak1_75_784_-0.562960018009386_9.3350688347743_10.9370931667623 chr18 62188570 62189508 + 10.9370931667623 NA Intergenic Intergenic -9058 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding unique_peak2_21_248_-1.10020418937413_7.40989983738102_10.936188364321 chr1 162547898 162549264 + 10.936188364321 NA promoter-TSS (NM_144877) promoter-TSS (NM_144877) -236 NM_144877 71449 Mm.270569 NM_144877 ENSMUSG00000026694 Mettl13 5630401D24Rik methyltransferase like 13 protein-coding unique_peak1_32_78_1.27353919948378_6.94055034791899_10.9354876628007 chr5 148493377 148494184 + 10.9354876628007 NA Intergenic Intergenic 59008 NM_011908 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG ubiquitin-like 3 protein-coding common_peak1_32_78_1.27353919948378_6.94055034791899_10.9354876628007 chr11 98497593 98498143 + 10.9354876628007 NA intron (NM_011771, intron 3 of 7) intron (NM_011771, intron 3 of 7) 48163 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding common_peak1_75_327_0.69603682115152_8.70557041519384_10.9349791153441 chr5 115068829 115069731 + 10.9349791153441 NA intron (NM_029012, intron 2 of 10) MLT1B|LTR|ERVL-MaLR 38682 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt Gm13826|OTTMUSG00000014624 ribosomal protein L37, retrotransposed protein-coding common_peak2_186_1231_0.380131133407122_10.4568521073985_10.9349738865054 chr3 52879651 52883337 + 10.9349738865054 NA Intergenic Intergenic 46172 NR_040555 622124 Mm.389434 NR_040555 ENSMUSG00000104401 Gm20750 - predicted gene, 20750 ncRNA common_peak2_104_536_0.556801952691407_9.34717925433112_10.9318207257078 chr11 118354399 118356091 + 10.9318207257078 NA 5' UTR (NM_011594, exon 1 of 5) 5' UTR (NM_011594, exon 1 of 5) 166 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding common_peak1_104_536_0.556801952691407_9.34717925433112_10.9318207257078 chr12 98574006 98575557 + 10.9318207257078 NA promoter-TSS (NM_001316665) promoter-TSS (NM_001316665) -69 NM_001316665 72258 Mm.196158 NM_029911 ENSMUSG00000033854 Kcnk10 1700024D23Rik|3010005K24Rik|Trek2 potassium channel, subfamily K, member 10 protein-coding unique_peak2_12_164_-1.43751328079124_6.6475655738502_10.9312234604825 chr4 42054504 42055553 + 10.9312234604825 NA intron (NR_033123, intron 1 of 4) intron (NR_033123, intron 1 of 4) 102 NR_033123 108816 Mm.440578 NM_178649 4933409K07Rik AV071682|b1402 RIKEN cDNA 4933409K07 gene pseudo unique_peak2_47_499_-0.725396505383635_8.60308603197027_10.9306801781694 chr3 108194463 108196922 + 10.9306801781694 NA TTS (NM_001081320) TTS (NM_001081320) 5142 NM_028061 72023 Mm.246391 NM_028061 ENSMUSG00000048796 Cyb561d1 1600010M23Rik|AI605489|AW457162 cytochrome b-561 domain containing 1 protein-coding common_peak1_217_1524_0.343761019378382_10.7464740370268_10.9305564049465 chr5 143908843 143910548 + 10.9305564049465 NA promoter-TSS (NM_008886) promoter-TSS (NM_008886) 144 NM_001172146 231872 Mm.200499 NM_146165 ENSMUSG00000029610 Aimp2 AA407136|AA407225|Aimp2(p38)|Jtv1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 protein-coding common_peak1_46_490_-0.736448126888675_8.57135515087035_10.9304699743959 chr7 118243803 118244436 + 10.9304699743959 NA promoter-TSS (NM_001031814) promoter-TSS (NM_001031814) 212 NR_027879 67745 Mm.483404 NM_183267 ENSMUSG00000055159 4930583K01Rik - RIKEN cDNA 4930583K01 gene ncRNA common_peak2_66_691_-0.604084527487002_9.13258596389322_10.9303494355924 chr12 73697913 73700391 + 10.9303494355924 NA intron (NM_001313977, intron 7 of 14) intron (NM_001313977, intron 7 of 14) 114356 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_270_3049_-0.271125993990204_11.4390305303425_10.927980898115 chr10 128090986 128093914 + 10.927980898115 NA promoter-TSS (NM_054078) promoter-TSS (NM_054078) -333 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak1_222_2456_-0.304198268407761_11.1105830081583_10.9266591154532 chr10 80622557 80624109 + 10.9266591154532 NA intron (NM_134002, intron 1 of 10) intron (NM_134002, intron 1 of 10) 553 NM_134002 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding common_peak1_106_1114_-0.463857575451893_9.89089920708172_10.9251609957941 chr16 38712449 38713868 + 10.9251609957941 NA promoter-TSS (NM_020260) promoter-TSS (NM_020260) -123 NM_020260 12549 Mm.370848 NM_020260 ENSMUSG00000022799 Arhgap31 5830477L08Rik|AU041750|Cdgap|D330026I07Rik Rho GTPase activating protein 31 protein-coding common_peak2_47_154_0.964263374004214_7.75825609227634_10.9230275453318-2 chr6 83009696 83010746 + 10.9230275453318 NA intron (NM_033079, intron 7 of 9) RMER6B|LTR|ERVK 23250 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding common_peak2_47_154_0.964263374004214_7.75825609227634_10.9230275453318 chr2 156762616 156763840 + 10.9230275453318 NA 3' UTR (NM_146128, exon 13 of 13) 3' UTR (NM_146128, exon 13 of 13) -12236 NM_172118 98932 Mm.271770 NM_172118 ENSMUSG00000067818 Myl9 AI327049|MLC20|Mylc2c|RLC-C myosin, light polypeptide 9, regulatory protein-coding common_peak1_47_154_0.964263374004214_7.75825609227634_10.9230275453318 chr5 117318932 117319894 + 10.9230275453318 NA 5' UTR (NM_001033311, exon 1 of 10) 5' UTR (NM_001033311, exon 1 of 10) 147 NM_001033311 231668 Mm.298603 NM_001033311 ENSMUSG00000066894 Vsig10 - V-set and immunoglobulin domain containing 10 protein-coding common_peak1_168_1068_0.40576771080892_10.2649299931249_10.9226505522487 chr8 36094461 36096156 + 10.9226505522487 NA intron (NM_172911, intron 1 of 5) intron (NM_172911, intron 1 of 5) 480 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding unique_peak2_26_295_-0.987245798789354_7.71583046623427_10.9225580465674 chrX 107223071 107224945 + 10.9225580465674 NA Intergenic MTE2b|LTR|ERVL-MaLR -31870 NM_001177781 213439 Mm.383562 NM_001033251 ENSMUSG00000073008 Gpr174 Gm376|Lypsr3 G protein-coupled receptor 174 protein-coding common_peak2_150_1605_-0.380735792531762_10.4588882812514_10.9198990990195 chr17 34101203 34103914 + 10.9198990990195 NA Intergenic B3|SINE|B2 -7249 NR_046183 414076 Mm.473092 NR_046183 ENSMUSG00000098197 BC051537 - cDNA sequence BC051537 ncRNA common_peak2_92_447_0.603461798829986_9.1090858214726_10.9188467550359 chr2 104027621 104028780 + 10.9188467550359 NA intron (NM_020593, intron 1 of 9) CpG 401 NM_212433 57443 Mm.143768 NM_020593 ENSMUSG00000027180 Fbxo3 1200002G09Rik|1700026K02Rik|AI046358|Fba F-box protein 3 protein-coding common_peak1_55_200_0.862125370025353_8.0821143761916_10.9184991872401 chr15 51729824 51730956 + 10.9184991872401 NA Intergenic Intergenic 135071 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak2_55_200_0.862125370025353_8.0821143761916_10.9184991872401 chr2 59611573 59612839 + 10.9184991872401 NA intron (NM_198294, intron 1 of 26) CpG 164 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak1_22_258_-1.07834748359304_7.47763454589003_10.9172554567891 chr13 41371960 41372498 + 10.9172554567891 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -13228 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_22_258_-1.07834748359304_7.47763454589003_10.9172554567891-2 chr19 11964786 11965221 + 10.9172554567891 NA promoter-TSS (NM_001033174) promoter-TSS (NM_001033174) -841 NM_001033174 76303 Mm.291279 NM_001033174 ENSMUSG00000024687 Osbp 1110018F06Rik|AW559088|mKIAA4220 oxysterol binding protein protein-coding common_peak1_74_774_-0.567902791871933_9.31410110422563_10.9156722369391 chr8 69774363 69775215 + 10.9156722369391 NA intron (NM_177899, intron 1 of 3) CpG 122 NM_177899 330788 Mm.41364 NM_177899 ENSMUSG00000043090 Zfp866 9830167H18Rik|AI875089|C85843|D330038O06Rik zinc finger protein 866 protein-coding common_peak1_67_275_0.748236426568715_8.48264267006252_10.914790598357 chr8 120781952 120782976 + 10.914790598357 NA Intergenic Intergenic 43825 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_264_1993_0.302397657923239_11.1126485233598_10.9122861600769 chr15 73153511 73156591 + 10.9122861600769 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 29896 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak2_73_763_-0.571032865637982_9.29191239521676_10.9118242763321 chr17 3260165 3262078 + 10.9118242763321 NA Intergenic Intergenic -65452 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak2_143_1526_-0.391962051365116_10.3805033211143_10.9115725130227 chr3 79152263 79154692 + 10.9115725130227 NA Intergenic Intergenic -7602 NM_001099624 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak2_37_401_-0.824075176595682_8.23901410288109_10.907974009217 chr7 4684131 4685689 + 10.907974009217 NA promoter-TSS (NM_024172) promoter-TSS (NM_024172) 53 NM_024172 66245 Mm.6803 NM_024172 ENSMUSG00000063802 Hspbp1 1500019G21Rik HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 protein-coding common_peak2_163_1024_0.41325969304533_10.2080380409155_10.9065326129216 chr11 118259140 118261811 + 10.9065326129216 NA 3' UTR (NM_001033528, exon 21 of 21) 3' UTR (NM_001033528, exon 21 of 21) -11883 NM_011180 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak2_14_183_-1.34151783464567_6.85280303873418_10.9063959752716 chr1 88450271 88451468 + 10.9063959752716 NA Intergenic Intergenic 43859 NM_029269 75396 Mm.173058 NM_029269 ENSMUSG00000026295 Spp2 0610038O04Rik|pp-24|spp24 secreted phosphoprotein 2 protein-coding common_peak1_14_183_-1.34151783464567_6.85280303873418_10.9063959752716 chr9 124127349 124127764 + 10.9063959752716 NA TTS (NM_009917) TTS (NM_009917) 6013 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak2_63_249_0.783693600835793_8.35763108507998_10.9058936411068 chr14 47514790 47515972 + 10.9058936411068 NA intron (NR_027414, intron 4 of 5) intron (NR_027414, intron 4 of 5) 42820 NM_001146085 78938 Mm.11935 NM_030236 ENSMUSG00000037536 Fbxo34 2900057B08Rik|5830426G16Rik F-box protein 34 protein-coding common_peak2_65_262_0.765013269554935_8.42142562406977_10.9055173423813 chr1 144282633 144284334 + 10.9055173423813 NA Intergenic Intergenic -34379 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak1_20_239_-1.12941595181002_7.34218261970351_10.9047181676494 chr17 63369491 63369979 + 10.9047181676494 NA intron (NM_015794, intron 5 of 8) intron (NM_015794, intron 5 of 8) -56762 NR_130176 414079 Mm.444282 NR_130176 ENSMUSG00000090565 4930405O22Rik - RIKEN cDNA 4930405O22 gene ncRNA common_peak2_43_460_-0.762212886549031_8.46751649715482_10.9042199577814 chr4 114999216 115000115 + 10.9042199577814 NA promoter-TSS (NM_009185) promoter-TSS (NM_009185) -453 NM_001304559 20460 Mm.3988 NM_009185 ENSMUSG00000028718 Stil Sil Scl/Tal1 interrupting locus protein-coding common_peak2_326_3764_-0.242557397876368_11.7571554506211_10.9027128959691 chr6 117878400 117881215 + 10.9027128959691 NA Intergenic ID4_|SINE|ID 16730 NM_001001792 22685 Mm.249661 NM_008616 ENSMUSG00000042097 Zfp239 Mok-2|Mok2|Znf239 zinc finger protein 239 protein-coding common_peak1_74_321_0.699232830175049_8.68053329320214_10.9018200635596 chrX 104413108 104414038 + 10.9018200635596 NA intron (NM_009592, intron 1 of 15) intron (NM_009592, intron 1 of 15) 273 NM_009592 11306 Mm.426128 NM_009592 ENSMUSG00000031333 Abcb7 AA517758|AU019072|Abc7 ATP-binding cassette, sub-family B (MDR/TAP), member 7 protein-coding common_peak1_306_2433_0.275077819186407_11.3866523623069_10.9016525850176 chr1 161786009 161788527 + 10.9016525850176 NA intron (NM_010177, intron 1 of 3) intron (NM_010177, intron 1 of 3) 1227 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding unique_peak1_22_37_1.69053329064992_6.09319415876855_10.8884245744778 chr11 108235386 108235832 + 10.8884245744778 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 108279 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_255_2861_-0.280105448856075_11.3427552322986_10.888412441399 chr11 6474255 6476883 + 10.888412441399 NA exon (NM_011221, exon 1 of 1) exon (NM_011221, exon 1 of 1) 507 NM_011221 19291 Mm.296150 NM_011221 ENSMUSG00000094483 Purb 2310015K15Rik|AA114818|Cager-2|D11Bwg0414e purine rich element binding protein B protein-coding common_peak1_61_237_0.798476752612719_8.2940561396143_10.8838328434696 chr1 138348359 138349467 + 10.8838328434696 NA Intergenic Intergenic 75175 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_31_343_-0.903399180390574_7.97456516450681_10.8820061019949 chr2 164079696 164080337 + 10.8820061019949 NA intron (NM_021420, intron 2 of 10) B1_Mur1|SINE|Alu 5838 NM_021420 58231 Mm.234472 NM_021420 ENSMUSG00000018209 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 protein-coding common_peak2_48_160_0.945959358796068_7.80389655751265_10.8804570415204 chr14 25420941 25421944 + 10.8804570415204 NA Intergenic Intergenic -37743 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak2_38_410_-0.810051134073823_8.27796901664477_10.8797405126141-2 chr18 75391154 75393442 + 10.8797405126141 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 24933 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding unique_peak2_38_410_-0.810051134073823_8.27796901664477_10.8797405126141 chr10 120660024 120661772 + 10.8797405126141 NA Intergenic (CCCCCA)n|Simple_repeat|Simple_repeat -104834 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_146_877_0.44293362352861_9.99954394129966_10.8789757807063 chr4 111718906 111721693 + 10.8789757807063 NA intron (NM_026470, intron 1 of 12) CpG 289 NM_026470 67946 Mm.275526 NM_026470 ENSMUSG00000034401 Spata6 1700062C23Rik|AI790763|Hash|KRP|Mash spermatogenesis associated 6 protein-coding common_peak1_105_544_0.55224165696518_9.36623324814688_10.8789072659952 chr11 118354238 118356044 + 10.8789072659952 NA 5' UTR (NM_011594, exon 1 of 5) 5' UTR (NM_011594, exon 1 of 5) 270 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding common_peak2_140_1491_-0.395766216675934_10.3451487119173_10.8767060468543 chr7 45015258 45017814 + 10.8767060468543 NA promoter-TSS (NM_001008422) promoter-TSS (NM_001008422) -287 NM_001008422 233208 Mm.28298 NM_001008422 ENSMUSG00000038406 Scaf1 AI480556|SR-A1 SR-related CTD-associated factor 1 protein-coding common_peak1_217_1525_0.342815299881462_10.7469468967753_10.8757004880983 chr1 125559806 125561560 + 10.8757004880983 NA promoter-TSS (NM_028787) promoter-TSS (NM_028787) -333 NM_028787 74150 Mm.28654 NM_028787 ENSMUSG00000026342 Slc35f5 1300003P13Rik|AI646727 solute carrier family 35, member F5 protein-coding common_peak1_151_920_0.433143790864621_10.0636292415236_10.8745920074744 chr17 46247342 46248984 + 10.8745920074744 NA promoter-TSS (NM_145353) promoter-TSS (NM_145353) 83 NM_145353 28064 Mm.248769 NM_145353 ENSMUSG00000071074 Yipf3 C6orf109|D17Wsu94e|KLIP1 Yip1 domain family, member 3 protein-coding common_peak1_117_638_0.512466595281186_9.57590541858759_10.8742766904996 chr11 4848450 4849489 + 10.8742766904996 NA exon (NM_010898, exon 1 of 16) exon (NM_010898, exon 1 of 16) 575 NM_001252250 18016 Mm.297109 NM_010898 ENSMUSG00000009073 Nf2 merlin neurofibromin 2 protein-coding common_peak2_138_1468_-0.398633899763679_10.3213017306744_10.8734246484916 chr5 74534859 74536736 + 10.8734246484916 NA intron (NM_001159574, intron 1 of 15) CpG 315 NM_001159574 66899 Mm.272468 NM_024183 ENSMUSG00000029227 Fip1l1 1300019H17Rik|Rje FIP1 like 1 (S. cerevisiae) protein-coding common_peak1_35_92_1.19213886195099_7.13522824208353_10.8722618931395 chr2 32734720 32735448 + 10.8722618931395 NA intron (NM_027529, intron 2 of 2) intron (NM_027529, intron 2 of 2) 5932 NM_027529 70730 Mm.401360 NM_027529 ENSMUSG00000009551 6330409D20Rik AA517851 RIKEN cDNA 6330409D20 gene protein-coding common_peak2_144_860_0.446899473994046_9.97331916439387_10.869225594483 chr1 181852078 181854104 + 10.869225594483 NA Intergenic Intergenic -10690 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak2_206_2261_-0.316653377589741_10.9850565251949_10.8691862302135 chr7 82865543 82868735 + 10.8691862302135 NA promoter-TSS (NM_175366) promoter-TSS (NM_175366) -194 NM_175366 108797 Mm.306789 NM_175366 ENSMUSG00000057706 Mex3b 4931439A04Rik|M-04814|Rkhd3|mKIAA2009 mex3 RNA binding family member B protein-coding common_peak1_76_794_-0.558089509398652_9.35576629547239_10.8672767825053 chr1 85703138 85704355 + 10.8672767825053 NA intron (NM_013673, intron 17 of 19) intron (NM_013673, intron 17 of 19) 32860 NM_177055 319997 Mm.116691 NM_177055 ENSMUSG00000052760 A630001G21Rik - RIKEN cDNA A630001G21 gene protein-coding common_peak1_101_1059_-0.47556546113675_9.81206581888219_10.8667507218262 chr13 52980283 52981083 + 10.8667507218262 NA intron (NM_017373, intron 1 of 1) CpG 356 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_379_3240_0.239471107330081_11.7819588589829_10.8661596852977 chr12 101082445 101084371 + 10.8661596852977 NA non-coding (NR_038050, exon 1 of 2) non-coding (NR_038050, exon 1 of 2) 294 NM_211355 68734 Mm.87077 NM_211355 ENSMUSG00000041846 Smek1 1110034C04Rik|BC064465|Ppp4r3a|mKIAA2010 SMEK homolog 1, suppressor of mek1 (Dictyostelium) protein-coding common_peak1_52_548_-0.684920573562087_8.75820205222416_10.8640199242993 chr12 86890400 86891325 + 10.8640199242993 NA Intergenic Intergenic -6048 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_134_1423_-0.405420277248483_10.2730232923422_10.8627308275063 chr4 136310274 136311832 + 10.8627308275063 NA 5' UTR (NM_028871, exon 1 of 11) 5' UTR (NM_028871, exon 1 of 11) 111 NM_001277123 74326 Mm.31051 NM_028871 ENSMUSG00000066037 Hnrnpr 2610003J05Rik|2610528B01Rik|Hnrpr heterogeneous nuclear ribonucleoprotein R protein-coding unique_peak2_28_314_-0.950544703874711_7.82393566644992_10.8615601380832 chr3 21965148 21966680 + 10.8615601380832 NA Intergenic Intergenic -110738 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_14_12_2.48160440327026_4.94124191977622_10.8607146827523-2 chr14 25551338 25551779 + 10.8607146827523 NA intron (NM_001310666, intron 3 of 23) intron (NM_001310666, intron 3 of 23) 17119 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak1_14_12_2.48160440327026_4.94124191977622_10.8607146827523 chr12 108656849 108657240 + 10.8607146827523 NA intron (NM_007965, intron 3 of 12) intron (NM_007965, intron 3 of 12) -1576 NR_029771 723909 NR_029771 ENSMUSG00000065436 Mir342 Mirn342|mmu-mir-342 microRNA 342 ncRNA unique_peak1_14_12_2.48160440327026_4.94124191977622_10.8607146827523-4 chr6 129213815 129214198 + 10.8607146827523 NA Intergenic Intergenic 24039 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA unique_peak1_14_12_2.48160440327026_4.94124191977622_10.8607146827523-3 chr19 53992833 53993188 + 10.8607146827523 NA intron (NM_019658, intron 2 of 8) intron (NM_019658, intron 2 of 8) 48134 NM_019658 56392 Mm.228669 NM_019658 ENSMUSG00000024976 Shoc2 AU017287|Sur8|mKIAA0862 soc-2 (suppressor of clear) homolog (C. elegans) protein-coding common_peak1_44_138_1.00723756484112_7.62255985514407_10.8606899001915 chr2 65192963 65193783 + 10.8606899001915 NA intron (NM_177025, intron 1 of 13) intron (NM_177025, intron 1 of 13) 45253 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak2_120_1267_-0.431772185503959_10.0924529373874_10.8606345793345 chr17 24469334 24471286 + 10.8606345793345 NA promoter-TSS (NM_025954) promoter-TSS (NM_025954) -163 NM_025954 67078 Mm.28541 NM_025954 ENSMUSG00000043445 Pgp 1700012G19Rik|AI481330|AUM|G3PP phosphoglycolate phosphatase protein-coding common_peak1_90_433_0.610793810275569_9.06694813758226_10.8602663501668 chr13 55622443 55623602 + 10.8602663501668 NA promoter-TSS (NM_007596) promoter-TSS (NM_007596) 17 NM_007596 12328 Mm.2313 NM_007596 ENSMUSG00000021501 Caml AI385748|Camlg calcium modulating ligand protein-coding common_peak2_172_1858_-0.351100523426933_10.684760793206_10.8600500587763 chr19 37374795 37376758 + 10.8600500587763 NA promoter-TSS (NM_010615) promoter-TSS (NM_010615) -627 NM_010615 16551 Mm.42203 NM_010615 ENSMUSG00000012443 Kif11 Eg5|Kif8|Kifl1|Knsl1 kinesin family member 11 protein-coding common_peak1_111_1168_-0.451269842141018_9.96542429346115_10.8593088339598 chr14 32084963 32086274 + 10.8593088339598 NA promoter-TSS (NM_001047433) promoter-TSS (NM_001047433) 74 NR_104303 105638 Mm.2519 NM_172254 ENSMUSG00000021905 Dph3 DELGIP1|DelgipP1|Desr1|KTI11|Zcsl2 diphthamine biosynthesis 3 protein-coding common_peak2_177_1150_0.390958561818314_10.3641513990414_10.8583087295711 chr1 91249457 91251565 + 10.8583087295711 NA intron (NM_026454, intron 1 of 9) CpG 192 NM_026454 67921 Mm.337238 NM_026454 ENSMUSG00000034343 Ube2f 2510010F15Rik|AI851109 ubiquitin-conjugating enzyme E2F (putative) protein-coding common_peak2_86_404_0.631019732893865_8.97728796421892_10.8580912234669 chr14 76503927 76506374 + 10.8580912234669 NA intron (NM_009366, intron 1 of 2) intron (NM_009366, intron 1 of 2) 640 NM_009366 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak1_29_65_1.36426231323925_6.72652527597808_10.8578161589338 chr15 27724571 27725137 + 10.8578161589338 NA Intergenic Intergenic -43312 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_41_440_-0.780547890572667_8.39436090027119_10.8576809892115 chrX 48451288 48452425 + 10.8576809892115 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 11276 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak2_99_499_0.573455529847008_9.25251204958559_10.8561380166332 chr11 108222181 108224006 + 10.8561380166332 NA intron (NM_011101, intron 2 of 16) ID4_|SINE|ID 120795 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_180_1178_0.385859312496599_10.3962776592281_10.8559711920759 chr10 7792014 7793898 + 10.8559711920759 NA promoter-TSS (NM_026141) promoter-TSS (NM_026141) 62 NM_026141 67418 Mm.38927 NM_026141 ENSMUSG00000015757 Ppil4 3732410E19Rik|3830425H19Rik|AI788954|AW146233|PPIase peptidylprolyl isomerase (cyclophilin)-like 4 protein-coding common_peak2_174_1123_0.395124981180928_10.3319888108114_10.8552724767473 chr11 121228234 121229867 + 10.8552724767473 NA promoter-TSS (NM_001254735) promoter-TSS (NM_001254735) -110 NM_001254735 217370 Mm.27182 NM_144832 ENSMUSG00000039294 BC017643 - cDNA sequence BC017643 protein-coding common_peak2_307_2445_0.273737474618391_11.3930774258366_10.8544139976043 chr11 116842069 116844464 + 10.8544139976043 NA promoter-TSS (NM_028865) promoter-TSS (NM_028865) 183 NM_033398 107817 Mm.481684 NM_033398 ENSMUSG00000056962 Jmjd6 5730436I23Rik|D11Ertd195e|PSR|PtdSerR|Ptdsr|mKIAA0585 jumonji domain containing 6 protein-coding unique_peak1_20_30_1.82327833341162_5.86583547709269_10.8541374026627-3 chr8 124286847 124287195 + 10.8541374026627 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 55627 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak1_20_30_1.82327833341162_5.86583547709269_10.8541374026627-2 chr11 120957177 120957732 + 10.8541374026627 NA intron (NM_001038653, intron 5 of 5) intron (NM_001038653, intron 5 of 5) 8387 NM_001038654 80879 Mm.28632 NM_030696 ENSMUSG00000025161 Slc16a3 Mct3|Mct4 solute carrier family 16 (monocarboxylic acid transporters), member 3 protein-coding unique_peak1_20_30_1.82327833341162_5.86583547709269_10.8541374026627 chr10 12820761 12821208 + 10.8541374026627 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 40751 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_95_995_-0.493001841603274_9.71350101126644_10.8540789174676 chr9 118103169 118104722 + 10.8540789174676 NA intron (NM_026442, intron 2 of 3) PB1D10|SINE|Alu 46251 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding common_peak1_53_558_-0.67788459481724_8.78776217543457_10.8533837153113-2 chr2 165540214 165541016 + 10.8533837153113 NA Intergenic Intergenic 36718 NM_130451 170441 Mm.34147 NM_130451 ENSMUSG00000027661 Slc2a10 AA450473|Glut10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding common_peak1_53_558_-0.67788459481724_8.78776217543457_10.8533837153113 chr2 146855560 146856486 + 10.8533837153113 NA exon (NM_001033298, exon 1 of 14) exon (NM_001033298, exon 1 of 14) 134 NM_001033298 228730 Mm.292352 NM_001033298 ENSMUSG00000074749 Kiz Gm114|Ncrna00153|Plk1s1 kizuna centrosomal protein protein-coding common_peak2_96_477_0.584471555382661_9.19310258567208_10.8481800431444 chr1 121430789 121432055 + 10.8481800431444 NA intron (NM_001025156, intron 1 of 23) intron (NM_001025156, intron 1 of 23) 355 NM_001025156 70829 Mm.25788 NM_027567 ENSMUSG00000026339 Ccdc93 4633402D15Rik|9230102M16Rik coiled-coil domain containing 93 protein-coding common_peak1_113_1190_-0.446846667127582_9.99453436430032_10.8480109662208 chr11 100574249 100575704 + 10.8480109662208 NA promoter-TSS (NM_001146318) promoter-TSS (NM_001146318) 37 NM_009923 12799 Mm.15711 NM_009923 ENSMUSG00000006782 Cnp CNPase|Cnp-1|Cnp1 2',3'-cyclic nucleotide 3' phosphodiesterase protein-coding common_peak2_80_836_-0.542741729557465_9.43771294777161_10.8451961057116 chr11 96915443 96917332 + 10.8451961057116 NA exon (NM_030248, exon 1 of 14) exon (NM_030248, exon 1 of 14) 127 NM_001308183 80280 Mm.28297 NM_030248 ENSMUSG00000018669 Cdk5rap3 1810007E24Rik|BC002318|C53|C81486|HSF-27|IC53|LZAP|MST016 CDK5 regulatory subunit associated protein 3 protein-coding common_peak2_54_568_-0.670993823920666_8.81678793034625_10.8450810371531 chr1 166387031 166389287 + 10.8450810371531 NA intron (NM_030245, intron 4 of 7) intron (NM_030245, intron 4 of 7) 8992 NM_030245 27878 Mm.100665 NM_030245 ENSMUSG00000026563 Tada1 2900026B15Rik|D1Ertd251e|Staf42|Tada1l transcriptional adaptor 1 protein-coding common_peak2_200_2189_-0.32203693818553_10.9356966853958_10.8450015840476 chr7 97578867 97581683 + 10.8450015840476 NA promoter-TSS (NM_183251) promoter-TSS (NM_183251) 379 NM_001081267 233532 Mm.43977 NM_001081267 ENSMUSG00000035623 Rsf1 4832420A03Rik|C030033M12Rik|Gm164|Hbxap|XAP8|p325 remodeling and spacing factor 1 protein-coding unique_peak2_24_276_-1.0277269739128_7.59987867909279_10.8399333919223 chr19 60873855 60875173 + 10.8399333919223 NA promoter-TSS (NM_007452) promoter-TSS (NM_007452) 24 NM_007452 11757 Mm.29821 NM_007452 ENSMUSG00000024997 Prdx3 AW822249|Aop1|D0Tohi1|Ef2l|Mer5|Prx3|SP22|TDXM peroxiredoxin 3 protein-coding common_peak1_55_578_-0.664242476784954_8.84529829959676_10.8389757891765 chr1 191416742 191417812 + 10.8389757891765 NA Intergenic Intergenic -20236 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak2_55_578_-0.664242476784954_8.84529829959676_10.8389757891765-2 chrX 134058478 134060302 + 10.8389757891765 NA exon (NM_001290399, exon 1 of 11) exon (NM_001290399, exon 1 of 11) 214 NM_133196 108062 Mm.67938 NM_133196 ENSMUSG00000031256 Cstf2 C630034J23Rik|Cstf64|mir-3112 cleavage stimulation factor, 3' pre-RNA subunit 2 protein-coding common_peak2_55_578_-0.664242476784954_8.84529829959676_10.8389757891765 chr13 54589641 54591050 + 10.8389757891765 NA promoter-TSS (NM_178605) promoter-TSS (NM_178605) 114 NM_025933 67044 Mm.29353 NM_025933 ENSMUSG00000025868 Higd2a 2010110M21Rik|AA690237 HIG1 domain family, member 2A protein-coding common_peak1_74_773_-0.566040047854743_9.31316973221704_10.8389544638252 chr15 80572474 80573508 + 10.8389544638252 NA intron (NM_001289442, intron 1 of 7) intron (NM_001289442, intron 1 of 7) 394 NM_001289442 17444 Mm.12947 NM_010815 ENSMUSG00000042351 Grap2 GRAP-2|GRB2L|GRBLG|GRID|Gads|GrbX|Grf40|GrpL|Mona|P38 GRB2-related adaptor protein 2 protein-coding common_peak1_34_371_-0.857713096584497_8.11030226281578_10.8382190299586 chr6 144670478 144671264 + 10.8382190299586 NA Intergenic Intergenic -1997 NR_040519 66760 Mm.233631 NR_040519 ENSMUSG00000085785 Sox5os3 4933425H06Rik SRY (sex determining region Y)-box 5, opposite strand 3 ncRNA common_peak2_250_2798_-0.282898290758917_11.3092466261935_10.8369344366571 chr6 47593315 47596154 + 10.8369344366571 NA intron (NM_001146689, intron 1 of 19) CpG 296 NM_007971 14056 Mm.246688 NM_007971 ENSMUSG00000029687 Ezh2 Enx-1|Enx1h|KMT6|mKIAA4065 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding common_peak2_63_659_-0.616844328747936_9.05790004987185_10.8362583363754 chr1 184004726 184006835 + 10.8362583363754 NA Intergenic Intergenic 28218 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak1_97_1016_-0.486615415760459_9.74679625597727_10.8333978756495 chr5 123930194 123931314 + 10.8333978756495 NA promoter-TSS (NM_001134767) promoter-TSS (NM_001134767) 65 NM_001134767 208908 Mm.243679 NM_001134767 ENSMUSG00000061882 Ccdc62 AI661708|Gm150 coiled-coil domain containing 62 protein-coding common_peak1_30_333_-0.917022087739745_7.92519324860418_10.8307358779911 chr9 32901535 32902161 + 10.8307358779911 NA Intergenic Intergenic 27118 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA unique_peak2_6_108_-1.93484419713171_5.80076222621107_10.830729232862 chr3 104841209 104841916 + 10.830729232862 NA intron (NM_009797, intron 3 of 9) B1_Mus1|SINE|Alu 22943 NM_009797 12340 Mm.19142 NM_009797 ENSMUSG00000070372 Capza1 CAPZ|CAZ1|Cappa1 capping protein (actin filament) muscle Z-line, alpha 1 protein-coding unique_peak2_6_108_-1.93484419713171_5.80076222621107_10.830729232862-2 chrX 73757961 73758859 + 10.830729232862 NA intron (NM_019587, intron 1 of 34) C-rich|Low_complexity|Low_complexity 1307 NM_019587 140571 Mm.275600 NM_019587 ENSMUSG00000031385 Plxnb3 AI451018|Plxn6 plexin B3 protein-coding common_peak2_162_1742_-0.363512410204315_10.5856006490235_10.8296370571739 chr12 85279192 85281082 + 10.8296370571739 NA intron (NM_025421, intron 1 of 2) intron (NM_025421, intron 1 of 2) 298 NM_025421 66204 Mm.311985 NM_025421 ENSMUSG00000008822 Acyp1 1110039O14Rik|AI325944 acylphosphatase 1, erythrocyte (common) type protein-coding common_peak2_587_5764_0.181130482897544_12.5836701339879_10.8295978594584 chr7 127214867 127221444 + 10.8295978594584 NA exon (NM_017461, exon 2 of 11) exon (NM_017461, exon 2 of 11) 290 NM_017461 54204 Mm.18 NM_017461 ENSMUSG00000000486 Sept1 Diff6|Pnutl3 septin 1 protein-coding common_peak1_62_649_-0.622686747964034_9.0329525339338_10.8282946201367 chr1 170277081 170278051 + 10.8282946201367 NA intron (NM_012009, intron 1 of 3) intron (NM_012009, intron 1 of 3) 242 NM_012009 26904 Mm.57009 NM_012009 ENSMUSG00000102418 Sh2d1b1 EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b SH2 domain containing 1B1 protein-coding common_peak1_185_1224_0.378862998184013_10.4479975329819_10.8271660722582-2 chr2 157006189 157007747 + 10.8271660722582 NA intron (NM_025853, intron 1 of 10) CpG 107 NM_025853 66934 Mm.25410 NM_025853 ENSMUSG00000027635 Dsn1 1700022L09Rik|AW552447 DSN1 homolog, MIS12 kinetochore complex component protein-coding common_peak1_185_1224_0.378862998184013_10.4479975329819_10.8271660722582 chr11 101118994 101120062 + 10.8271660722582 NA promoter-TSS (NM_134024) promoter-TSS (NM_134024) 296 NM_026501 67998 Mm.33881 NM_026501 ENSMUSG00000017802 Fam134c 1300010M03Rik|4933404C01Rik|AI551748 family with sequence similarity 134, member C protein-coding common_peak1_351_2926_0.251039957030624_11.6407270089241_10.8260387173438 chr9 45953892 45956077 + 10.8260387173438 NA 5' UTR (NM_001289668, exon 1 of 27) 5' UTR (NM_001289668, exon 1 of 27) 265 NM_172257 214597 Mm.379345 NM_172257 ENSMUSG00000034908 Sidt2 B930096O19|BC023957|CGI-40 SID1 transmembrane family, member 2 protein-coding common_peak2_171_1846_-0.352016358355776_10.6749599718046_10.8249131016324 chr7 38182600 38185241 + 10.8249131016324 NA intron (NM_028166, intron 1 of 3) CpG 133 NM_028166 72244 Mm.187554 NM_028166 1600014C10Rik AI428873 RIKEN cDNA 1600014C10 gene protein-coding common_peak2_38_107_1.11805594744439_7.31391547588566_10.8235901269307 chr13 51743920 51744642 + 10.8235901269307 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 49466 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_39_420_-0.799929884249263_8.31771148094176_10.8229186505206 chr9 83447053 83448487 + 10.8229186505206 NA intron (NR_102437, intron 2 of 2) intron (NR_102437, intron 2 of 2) -6643 NM_029434 75782 Mm.199698 NM_027448 ENSMUSG00000032258 Lca5 4930431B11Rik|5730406O13Rik|AV274874|ORF64 Leber congenital amaurosis 5 (human) protein-coding common_peak2_243_1782_0.317653085794689_10.9589175305223_10.8216913287923 chr1 128356718 128360638 + 10.8216913287923 NA intron (NM_008567, intron 1 of 16) intron (NM_008567, intron 1 of 16) 1027 NM_008567 17219 Mm.4933 NM_008567 ENSMUSG00000026355 Mcm6 ASP-l1|D1Wsu22e|Mcmd6 minichromosome maintenance complex component 6 protein-coding common_peak1_31_74_1.29404688381564_6.8758421324037_10.8185114323048-2 chr15 73744928 73745662 + 10.8185114323048 NA intron (NM_001166388, intron 1 of 5) intron (NM_001166388, intron 1 of 5) -2731 NM_008975 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak1_31_74_1.29404688381564_6.8758421324037_10.8185114323048 chr10 126905474 126906076 + 10.8185114323048 NA Intergenic CpG -4404 NM_001159559 68876 Mm.276769 NM_026858 ENSMUSG00000025436 Xrcc6bp1 1110068E08Rik|2410012H02Rik|Atp23 XRCC6 binding protein 1 protein-coding unique_peak2_16_201_-1.25467522177762_7.03087387186298_10.8179395078894 chr5 100465745 100466815 + 10.8179395078894 NA intron (NM_172714, intron 4 of 12) intron (NM_172714, intron 4 of 12) 32293 NM_001115010 231506 Mm.212568 NM_172714 ENSMUSG00000035310 Lin54 AI461788 lin-54 homolog (C. elegans) protein-coding common_peak1_114_1200_-0.443454044733805_10.0082934133387_10.8175581787247 chr14 70283106 70285099 + 10.8175581787247 NA intron (NM_001304992, intron 1 of 12) intron (NM_001304992, intron 1 of 12) 5395 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak2_95_470_0.587416840852024_9.1732916700388_10.8147524106018 chr17 28327904 28329662 + 10.8147524106018 NA intron (NM_011287, intron 1 of 5) CpG 312 NM_011287 19896 Mm.336955 NM_011287 ENSMUSG00000037805 Rpl10a CsA-19|Nedd6 ribosomal protein L10A protein-coding common_peak1_48_508_-0.714645609165011_8.63419904149319_10.8122549745141 chr11 117114417 117115025 + 10.8122549745141 NA promoter-TSS (NM_001166506) promoter-TSS (NM_001166506) -451 NR_029459 74136 Mm.272312 NM_028777 ENSMUSG00000020823 Sec14l1 1200017E04Rik|2810012L19Rik|Naa-35 SEC14-like lipid binding 1 protein-coding common_peak2_58_609_-0.647139027408423_8.92909591874604_10.8112008799806 chr9 57835814 57837583 + 10.8112008799806 NA Intergenic CpG -2464 NM_019689 56380 Mm.425588 NM_019689 ENSMUSG00000004661 Arid3b Bdp|Dri2 AT rich interactive domain 3B (BRIGHT-like) protein-coding common_peak1_19_228_-1.14806956046617_7.26516900786386_10.8102718814152 chr11 109330868 109331402 + 10.8102718814152 NA Intergenic Intergenic -15732 NR_027883 67927 Mm.394490 NR_027883 ENSMUSG00000099630 1700096J18Rik - RIKEN cDNA 1700096J18 gene ncRNA common_peak2_93_973_-0.498034563469966_9.67876068034736_10.8097685226165 chr2 25421603 25424145 + 10.8097685226165 NA promoter-TSS (NM_001177367) promoter-TSS (NM_001177367) -368 NM_001289453 14347 Mm.1203 NM_013524 ENSMUSG00000036587 Fut7 AI853193|FTVII|Fuc-TVII|FucT-VII fucosyltransferase 7 protein-coding common_peak2_173_1115_0.395288830023022_10.3217657268407_10.8094943749242 chr14 105257957 105259762 + 10.8094943749242 NA exon (NM_029561, exon 1 of 8) exon (NM_029561, exon 1 of 8) 186 NM_001190989 76273 Mm.290669 NM_029561 ENSMUSG00000053253 Ndfip2 0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165 Nedd4 family interacting protein 2 protein-coding common_peak2_145_1547_-0.387258418572424_10.4025605468582_10.8093159913962 chr10 60277176 60279260 + 10.8093159913962 NA intron (NM_001146120, intron 1 of 13) intron (NM_001146120, intron 1 of 13) 590 NM_001146121 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding common_peak2_159_990_0.418229914003357_10.1618562041882_10.8061723101623 chr6 116207322 116209063 + 10.8061723101623 NA promoter-TSS (NR_131013) promoter-TSS (NR_131013) 159 NM_026585 28006 Mm.28524 NM_026585 ENSMUSG00000024104 Washc2 A130095H06|C530005J20Rik|D6Wsu116e|Fam21 WASH complex subunit 2 protein-coding unique_peak2_40_429_-0.786749584524034_8.35481805732744_10.8034503880595 chrX 19156835 19158825 + 10.8034503880595 NA Intergenic Intergenic -10859 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA common_peak2_40_429_-0.786749584524034_8.35481805732744_10.8034503880595 chr15 102350192 102351466 + 10.8034503880595 NA promoter-TSS (NM_153416) promoter-TSS (NM_153416) -70 NM_153416 223921 Mm.352946 NM_153416 ENSMUSG00000036678 Aaas AAA|ADRACALA|D030041N15Rik|GL003 achalasia, adrenocortical insufficiency, alacrimia protein-coding common_peak1_143_1524_-0.390071231905875_10.3795579113847_10.8021544810017 chr9 107871801 107873389 + 10.8021544810017 NA intron (NM_029169, intron 1 of 20) CpG 224 NM_011251 19654 Mm.139926 NM_011251 ENSMUSG00000032582 Rbm6 4930506F14Rik|Def-3|NY-LU-12|g16|mKIAA4015 RNA binding motif protein 6 protein-coding common_peak1_21_247_-1.09439856769292_7.40699702654041_10.8020877390403 chr17 47595127 47595612 + 10.8020877390403 NA intron (NM_007632, intron 2 of 4) intron (NM_007632, intron 2 of 4) 1902 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_45_144_0.985164025264931_7.6724911026474_10.8015579119365 chr1 156616911 156617854 + 10.8015579119365 NA intron (NM_001136104, intron 1 of 12) intron (NM_001136104, intron 1 of 12) 56957 NM_023141 30935 Mm.206737 NM_023141 ENSMUSG00000060519 Tor3a Adir torsin family 3, member A protein-coding common_peak1_17_210_-1.21641382683452_7.11289227528993_10.801362112118-2 chr2 165541246 165541649 + 10.801362112118 NA Intergenic Intergenic 37550 NM_130451 170441 Mm.34147 NM_130451 ENSMUSG00000027661 Slc2a10 AA450473|Glut10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding common_peak1_17_210_-1.21641382683452_7.11289227528993_10.801362112118 chr11 83291705 83291978 + 10.801362112118 NA intron (NR_028363, intron 1 of 2) intron (NR_028363, intron 1 of 2) 142 NR_028363 613254 Mm.383758 NR_028363 ENSMUSG00000093483 AA465934 - expressed sequence AA465934 ncRNA common_peak1_18_219_-1.18099551012777_7.19086195846078_10.7995098918781 chr5 112284408 112284871 + 10.7995098918781 NA intron (NM_009419, intron 1 of 6) intron (NM_009419, intron 1 of 6) 7932 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding unique_peak2_26_294_-0.982363577409609_7.7133893555444_10.799336492591 chr8 31120343 31121832 + 10.799336492591 NA intron (NM_175136, intron 2 of 5) intron (NM_175136, intron 2 of 5) 9241 NM_175136 68867 Mm.29532 NM_175136 ENSMUSG00000039328 Rnf122 1110063C11Rik ring finger protein 122 protein-coding common_peak2_89_930_-0.509846408807807_9.60771415315489_10.7973319171365 chrX 42406774 42410000 + 10.7973319171365 NA Intergenic Charlie7|DNA|hAT-Charlie -94178 NM_011364 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak2_35_380_-0.842349514434298_8.15247243027617_10.7973062800558 chr10 59636305 59637688 + 10.7973062800558 NA Intergenic Intergenic -20304 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak2_135_785_0.464987692274635_9.85087934839592_10.7972641393134 chr6 140513391 140516164 + 10.7972641393134 NA intron (NM_144920, intron 3 of 30) intron (NM_144920, intron 3 of 30) 90678 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak1_106_1112_-0.461267457986187_9.88960414834887_10.7971654831528 chr8 122610848 122612475 + 10.7971654831528 NA promoter-TSS (NM_021502) promoter-TSS (NM_021502) 35 NM_021502 59005 Mm.38746 NM_021502 ENSMUSG00000015013 Trappc2l 1810017G16Rik|AB030200|Hspc176|Tca17 trafficking protein particle complex 2-like protein-coding common_peak2_70_731_-0.582540292437026_9.22442969206553_10.794265950174 chr8 94917589 94919455 + 10.794265950174 NA promoter-TSS (NM_001033533) promoter-TSS (NM_001033533) -424 NM_001033533 234582 Mm.277871 NM_001033533 ENSMUSG00000063605 Ccdc102a BC027663|Gm586 coiled-coil domain containing 102A protein-coding unique_peak2_10_145_-1.55663912737242_6.41150499519381_10.7919904753215 chr5 107755659 107756232 + 10.7919904753215 NA intron (NM_007964, intron 17 of 17) (GGAA)n|Simple_repeat|Simple_repeat -30140 NM_001267621 14581 Mm.2078 NM_010278 ENSMUSG00000029275 Gfi1 AW495828|Gfi-1|Pal-1|Pal1 growth factor independent 1 protein-coding common_peak1_76_793_-0.556273656369891_9.35485836895801_10.7916928943396 chr13 110561729 110563312 + 10.7916928943396 NA Intergenic Intergenic 167476 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo-like kinase 2 protein-coding common_peak1_84_391_0.636932003737284_8.93317584598385_10.7898555968631 chr9 105642828 105643629 + 10.7898555968631 NA 5' UTR (NM_001081309, exon 1 of 20) 5' UTR (NM_001081309, exon 1 of 20) 233 NM_001081309 75669 Mm.274830 NM_029380 ENSMUSG00000032571 Pik3r4 2210010O15Rik|C730038E05Rik|C85833|D9Ertd418e phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150 protein-coding common_peak1_350_2916_0.250942811016252_11.6357410764063_10.7865801414854 chr11 5097935 5100375 + 10.7865801414854 NA promoter-TSS (NM_001290492) promoter-TSS (NM_001290492) -67 NM_001283061 14030 Mm.142822 NM_007968 ENSMUSG00000009079 Ewsr1 Ews|Ewsh Ewing sarcoma breakpoint region 1 protein-coding common_peak2_146_1558_-0.385394459633817_10.4137079828809_10.7863583938592 chr4 11965328 11967378 + 10.7863583938592 NA promoter-TSS (NM_001033453) promoter-TSS (NM_001033453) 97 NM_001098230 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding common_peak1_22_257_-1.07276645132974_7.47484402975838_10.7858030367775 chr15 42657214 42657789 + 10.7858030367775 NA intron (NM_009640, intron 1 of 8) intron (NM_009640, intron 1 of 8) 19476 NM_001286062 11600 Mm.309336 NM_009640 ENSMUSG00000022309 Angpt1 1110046O21Rik|Ang-1|Ang1 angiopoietin 1 protein-coding common_peak1_97_485_0.57867604449126_9.21415052585141_10.7855272488748 chr15 6567919 6569248 + 10.7855272488748 NA Intergenic Intergenic -11264 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_297_3388_-0.255106608190017_11.599090617389_10.7850684792948 chr7 139150853 139153573 + 10.7850684792948 NA intron (NM_001162540, intron 1 of 11) intron (NM_001162540, intron 1 of 11) 36281 NM_021302 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding common_peak1_75_782_-0.559279671521438_9.33322866153032_10.7847005340464 chr4 149663842 149665226 + 10.7847005340464 NA intron (NM_001164050, intron 2 of 23) PB1D10|SINE|Alu -1218 NM_001164052 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding unique_peak2_8_126_-1.71061163608585_6.13337886872924_10.7843368437728 chr1 160805440 160806295 + 10.7843368437728 NA Intergenic Intergenic -12929 NM_013862 29809 Mm.25833 NM_013862 ENSMUSG00000026721 Rabgap1l 5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471 RAB GTPase activating protein 1-like protein-coding common_peak2_94_463_0.590488795147639_9.15322539270139_10.7819088456429 chr4 152456941 152458569 + 10.7819088456429 NA intron (NM_010598, intron 1 of 15) intron (NM_010598, intron 1 of 15) -8900 NM_001252656 16498 Mm.388924 NM_010598 ENSMUSG00000028931 Kcnab2 F5|I2rf5|Kcnb3|kv-beta-2 potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein-coding common_peak1_54_195_0.866581174270707_8.04800043125056_10.7785190634078 chr14 20479387 20480095 + 10.7785190634078 NA intron (NM_001110794, intron 1 of 12) CpG 392 NM_001110794 11750 Mm.280231 NM_009674 ENSMUSG00000021814 Anxa7 AI265384|AI316497|Anx7|synexin annexin A7 protein-coding common_peak2_54_195_0.866581174270707_8.04800043125056_10.7785190634078 chr2 101780896 101782230 + 10.7785190634078 NA intron (NM_001110849, intron 2 of 9) intron (NM_001110849, intron 2 of 9) 16144 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_315_3619_-0.246450268484539_11.6985488477283_10.7784316165045 chr2 23067229 23069954 + 10.7784316165045 NA promoter-TSS (NM_001102438) promoter-TSS (NM_001102438) 390 NM_001102436 74159 Mm.181973 NM_028793 ENSMUSG00000026781 Acbd5 1300014E15Rik acyl-Coenzyme A binding domain containing 5 protein-coding common_peak1_87_412_0.623024393647217_9.00151016824305_10.7782197947612 chr19 6870770 6872411 + 10.7782197947612 NA Intergenic PB1D10|SINE|Alu -13379 NM_001081291 78317 Mm.329596 NM_198008 ENSMUSG00000047810 Ccdc88b 2610041P08Rik|Ccdc88 coiled-coil domain containing 88B protein-coding common_peak1_114_615_0.519779850276928_9.52667646583336_10.7687645427372 chr8 107149865 107151275 + 10.7687645427372 NA promoter-TSS (NM_025558) promoter-TSS (NM_025558) -91 NM_025558 66427 Mm.20242 NM_025558 ENSMUSG00000031924 Cyb5b 1810044O22Rik|AU015618|Cyb5m cytochrome b5 type B protein-coding common_peak1_20_238_-1.12339216418225_7.33917072588962_10.7684027401739 chr1 90602958 90603423 + 10.7684027401739 NA promoter-TSS (NM_133805) promoter-TSS (NM_133805) -235 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding common_peak2_155_956_0.423792957494548_10.1142715932333_10.7678947033689 chr1 128765220 128768137 + 10.7678947033689 NA Intergenic Intergenic -174379 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding unique_peak1_28_61_1.39446700412569_6.65142981244972_10.7678923710452 chr4 6987061 6987738 + 10.7678923710452 NA intron (NM_145711, intron 1 of 8) intron (NM_145711, intron 1 of 8) 3324 NM_145711 252838 Mm.435828 NM_145711 ENSMUSG00000041272 Tox 1700007F02Rik thymocyte selection-associated high mobility group box protein-coding unique_peak1_28_61_1.39446700412569_6.65142981244972_10.7678923710452-2 chr9 107983327 107984096 + 10.7678923710452 NA TTS (NM_026597) TTS (NM_026597) 2205 NM_026597 68176 Mm.76166 NM_026597 ENSMUSG00000042106 Fam212a 6230427J02Rik|Inka1 family with sequence similarity 212, member A protein-coding common_peak1_97_1015_-0.485196138675125_9.7460866174346_10.7666114426195 chr17 6981749 6983518 + 10.7666114426195 NA intron (NM_026611, intron 2 of 8) intron (NM_026611, intron 2 of 8) 3773 NM_026611 68195 Mm.181237 NM_026611 ENSMUSG00000094724 Rnaset2b 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2B protein-coding common_peak1_129_1366_-0.413270696086808_10.2101621795627_10.764432717992 chrY 90783168 90784773 + 10.764432717992 NA Intergenic Intergenic -1472 NM_133362 170942 Mm.76062 NM_133362 ENSMUSG00000096768 Erdr1 edr erythroid differentiation regulator 1 protein-coding common_peak1_56_207_0.844059001409081_8.12246921884563_10.7634469884919 chr8 124699631 124700833 + 10.7634469884919 NA intron (NM_145607, intron 4 of 17) intron (NM_145607, intron 4 of 17) 21743 NM_145607 234875 Mm.38436 NM_145607 ENSMUSG00000037300 Ttc13 BC017545 tetratricopeptide repeat domain 13 protein-coding common_peak2_42_128_1.0344999148307_7.5284772128386_10.762962832488 chr5 139060141 139061204 + 10.762962832488 NA intron (NM_001253890, intron 6 of 10) intron (NM_001253890, intron 6 of 10) -65719 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak1_102_523_0.558124882239289_9.3124854426571_10.7624634169273 chr2 76674842 76676087 + 10.7624634169273 NA 5' UTR (NM_031256, exon 1 of 8) 5' UTR (NM_031256, exon 1 of 8) 149 NM_031256 83435 Mm.41636 NM_031256 ENSMUSG00000002733 Plekha3 FAPP1 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3 protein-coding common_peak1_51_538_-0.692107906925218_8.7280875092899_10.7609955770366 chr2 181376562 181377460 + 10.7609955770366 NA intron (NM_144894, intron 2 of 6) intron (NM_144894, intron 2 of 6) -4224 NM_023684 72699 Mm.440138 NM_023684 ENSMUSG00000090077 Lime1 2810038K19Rik|LIME Lck interacting transmembrane adaptor 1 protein-coding common_peak2_265_2982_-0.272035638486496_11.406530443092_10.7573420231958 chr5 73285881 73289330 + 10.7573420231958 NA Intergenic Intergenic -3421 NR_040688 72276 Mm.271215 NR_040687 ENSMUSG00000100175 1700025M24Rik - RIKEN cDNA 1700025M24 gene ncRNA common_peak1_109_576_0.53547582092679_9.44016541910888_10.7565905013049 chr14 56574756 56576298 + 10.7565905013049 NA promoter-TSS (NM_001145978) promoter-TSS (NM_001145978) -92 NM_001145978 328417 Mm.379357 NM_001145978 ENSMUSG00000054509 Parp4 Adprtl1|C030027K23Rik|E230037B21Rik|Gm743|PARPL|PH5P|VAULT3|VPARP|p193 poly (ADP-ribose) polymerase family, member 4 protein-coding common_peak1_145_1546_-0.386326143877049_10.4020944095105_10.755178257404 chr17 83861403 83862922 + 10.755178257404 NA Intergenic Intergenic -15372 NM_025325 107766 Mm.30100 NM_025325 ENSMUSG00000000673 Haao 0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding common_peak1_99_1036_-0.478960364304131_9.77871999666116_10.7497888177987 chr17 33628455 33629790 + 10.7497888177987 NA promoter-TSS (NM_026712) promoter-TSS (NM_026712) 30 NM_026712 328801 Mm.181488 NM_026712 ENSMUSG00000073423 Zfp414 0610030H11Rik|Znf414 zinc finger protein 414 protein-coding common_peak1_313_3592_-0.246885274410158_11.6875305827971_10.7477782266936 chr6 117878740 117880642 + 10.7477782266936 NA Intergenic CpG 16614 NM_001001792 22685 Mm.249661 NM_008616 ENSMUSG00000042097 Zfp239 Mok-2|Mok2|Znf239 zinc finger protein 239 protein-coding common_peak2_228_2525_-0.29717102902938_11.1540534092729_10.7458490287668 chrX 73714598 73719864 + 10.7458490287668 NA exon (NM_007435, exon 1 of 10) exon (NM_007435, exon 1 of 10) 584 NM_001313698 27061 Mm.17 NM_012060 ENSMUSG00000002015 Bcap31 Bap31 B cell receptor associated protein 31 protein-coding common_peak1_164_1763_-0.35920931101832_10.6050301900484_10.7452695821964 chr19 6241703 6243125 + 10.7452695821964 NA intron (NM_194348, intron 1 of 39) intron (NM_194348, intron 1 of 39) 746 NM_194348 329015 Mm.277384 NM_194348 ENSMUSG00000024773 Atg2a 1810013C15Rik|A830054M12|BC023754|mKIAA0404 autophagy related 2A protein-coding common_peak1_42_448_-0.764844464487195_8.42814940249755_10.7446184037809 chr7 31002290 31002905 + 10.7446184037809 NA Intergenic Intergenic 20676 NM_001242647 76415 Mm.259739 NM_175240 ENSMUSG00000046826 Fam187b 1700020B09Rik|Tmem162 family with sequence similarity 187, member B protein-coding common_peak2_64_669_-0.611102765012239_9.08246590283902_10.7442078495288-2 chr4 147867874 147869753 + 10.7442078495288 NA promoter-TSS (NM_001025365) promoter-TSS (NM_001025365) -94 NM_001025365 28010 Mm.250504 NM_133873 ENSMUSG00000029022 Miip AA553001|AI853621|D4Wsu114e|IIP45 migration and invasion inhibitory protein protein-coding common_peak2_64_669_-0.611102765012239_9.08246590283902_10.7442078495288 chr18 49978473 49981107 + 10.7442078495288 NA intron (NM_001177759, intron 1 of 1) intron (NM_001177759, intron 1 of 1) 363 NM_001177759 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding common_peak1_86_897_-0.517773804075293_9.5516847327035_10.7432231855229 chr2 156180401 156181373 + 10.7432231855229 NA promoter-TSS (NM_133242) promoter-TSS (NM_133242) -649 NM_133242 170791 Mm.392436 NM_133242 ENSMUSG00000027620 Rbm39 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|R75070|Rnpc2|caper RNA binding motif protein 39 protein-coding common_peak2_96_1004_-0.487641422702882_9.72915907471485_10.7426569736933 chr6 72361670 72363290 + 10.7426569736933 NA promoter-TSS (NM_025607) promoter-TSS (NM_025607) -99 NM_025607 66510 Mm.170023 NM_025607 ENSMUSG00000055850 Rnf181 1700047F16Rik|2500002L14Rik|6230415N01Rik|C77350 ring finger protein 181 protein-coding common_peak1_28_313_-0.94595743437906_7.8216420317021_10.7423556066478-2 chr19 8770948 8771500 + 10.7423556066478 NA TTS (NM_016813) TTS (NM_016813) 228 NM_025791 66836 Mm.440071 NM_025791 ENSMUSG00000010097 Tmem223 0610006I08Rik transmembrane protein 223 protein-coding common_peak1_28_313_-0.94595743437906_7.8216420317021_10.7423556066478 chr15 73163060 73163692 + 10.7423556066478 NA intron (NM_153178, intron 1 of 18) B3|SINE|B2 21571 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_101_515_0.563055832890559_9.29275517186853_10.740969770176 chr13 67608913 67610100 + 10.740969770176 NA intron (NM_001163246, intron 1 of 3) intron (NM_001163246, intron 1 of 3) 201 NM_001163246 100416706 Mm.478045 NM_001163246 ENSMUSG00000058093 Zfp729b AA987127 zinc finger protein 729b protein-coding common_peak2_224_1596_0.333135627031719_10.8077164109271_10.7395943485586 chr10 128058129 128060444 + 10.7395943485586 NA exon (NM_019766, exon 1 of 8) exon (NM_019766, exon 1 of 8) 304 NM_019766 56351 Mm.305816 NM_019766 ENSMUSG00000071072 Ptges3 5730442A20Rik|Ptges|Tebp|cPGES|p23|sid3177 prostaglandin E synthase 3 (cytosolic) protein-coding unique_peak2_11_153_-1.47962338378916_6.52697484880032_10.7358322587937 chr4 132772016 132772865 + 10.7358322587937 NA intron (NM_011284, intron 4 of 8) B1_Mus1|SINE|Alu 4080 NM_011284 19891 Mm.2870 NM_011284 ENSMUSG00000028884 Rpa2 AA409079|AI325195|AU020965|RPA34|Rf-A2 replication protein A2 protein-coding common_peak1_279_3158_-0.263969573664269_11.4932674349147_10.733170638756 chr16 92816472 92819645 + 10.733170638756 NA intron (NM_001111022, intron 2 of 6) ID_B1|SINE|B4 8016 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_180_1180_0.383414066079204_10.3975002824368_10.7319209009486 chr2 25534291 25535586 + 10.7319209009486 NA intron (NM_009422, intron 4 of 10) PB1D10|SINE|Alu 12002 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding common_peak1_165_1044_0.406830953386459_10.2327027036615_10.7307127690167 chr5 36694931 36696407 + 10.7307127690167 NA intron (NM_001081232, intron 1 of 8) CpG 352 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak2_220_1557_0.337061657987336_10.7740103470553_10.7306169802088 chr19 5703018 5706504 + 10.7306169802088 NA exon (NM_010609, exon 1 of 3) exon (NM_010609, exon 1 of 3) 285 NM_010609 16530 Mm.440033 NM_010609 ENSMUSG00000024936 Kcnk7 2310014G03Rik|Kcnk6|Kcnk8|Knot|Mlk3 potassium channel, subfamily K, member 7 protein-coding common_peak2_540_5172_0.190026357247152_12.4317986548273_10.7304038349464 chr9 63734686 63743548 + 10.7304038349464 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 18877 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_36_98_1.1504270311318_7.20457013564551_10.7298896605103 chr6 39117916 39118784 + 10.7298896605103 NA promoter-TSS (NR_045813) promoter-TSS (NR_045813) -1 NM_172893 243771 Mm.268462 NM_172893 ENSMUSG00000038507 Parp12 9930021O16|AA409132|AA536654|ARTD12|PARP-12|Zc3hdc1 poly (ADP-ribose) polymerase family, member 12 protein-coding unique_peak2_3_77_-2.44237357810979_5.06421542980735_10.7275712376432 chr4 11793853 11794476 + 10.7275712376432 NA intron (NM_019753, intron 9 of 17) intron (NM_019753, intron 9 of 17) 36007 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak2_184_1996_-0.335729379354241_10.7957539277669_10.726313234245 chr8 72341800 72345808 + 10.726313234245 NA intron (NM_001289859, intron 21 of 21) intron (NM_001289859, intron 21 of 21) 24742 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_237_2634_-0.289902565098579_11.2186359639753_10.7219710021829 chr17 47598260 47601685 + 10.7219710021829 NA TTS (NM_001081636) TTS (NM_001081636) 6505 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_147_887_0.438592407234019_10.0137120699671_10.7157834418558 chr7 126897329 126898826 + 10.7157834418558 NA intron (NM_026827, intron 1 of 5) intron (NM_026827, intron 1 of 5) 201 NM_026827 68742 Mm.248646 NM_026827 ENSMUSG00000060538 Tmem219 1110032O16Rik|2900045G02Rik|IGFBP-3R transmembrane protein 219 protein-coding common_peak2_380_3256_0.237017205931425_11.7878366073616_10.7152991985796 chr4 62626941 62632081 + 10.7152991985796 NA intron (NM_019492, intron 14 of 19) intron (NM_019492, intron 14 of 19) 9839 NM_134257 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_48_161_0.93702623402606_7.80836311989765_10.7144018254414 chr17 13760348 13761508 + 10.7144018254414 NA intron (NM_010806, intron 1 of 32) CpG 387 NM_010806 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding unique_peak2_24_275_-1.02250926464178_7.59726982445728_10.7131517641677 chr10 4384107 4385699 + 10.7131517641677 NA intron (NM_001033466, intron 1 of 2) ORR1C2|LTR|ERVL-MaLR 3205 NM_001033466 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding common_peak1_24_275_-1.02250926464178_7.59726982445728_10.7131517641677 chr15 36715610 36716237 + 10.7131517641677 NA Intergenic Intergenic 75009 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak1_76_336_0.680116759591208_8.73666316097746_10.7123367014632 chr4 48278862 48279684 + 10.7123367014632 NA promoter-TSS (NM_001281978) promoter-TSS (NM_001281978) 316 NM_029572 76299 Mm.317701 NM_029572 ENSMUSG00000028343 Erp44 1110001E24Rik|AI849526|AL033348|Txndc4 endoplasmic reticulum protein 44 protein-coding common_peak1_32_351_-0.882111670976417_8.01837578314909_10.7118453655561 chr7 29908288 29908886 + 10.7118453655561 NA promoter-TSS (NM_001243908) promoter-TSS (NM_001243908) 70 NM_001243908 73729 Mm.333743 NM_001243908 ENSMUSG00000099689 Zfp383 1110003H10Rik zinc finger protein 383 protein-coding common_peak2_69_289_0.728148935694955_8.54398355786241_10.7110118508892 chr1 155812213 155813412 + 10.7110118508892 NA promoter-TSS (NM_023268) promoter-TSS (NM_023268) 87 NM_023268 104009 Mm.27035 NM_023268 ENSMUSG00000033684 Qsox1 1300003H02Rik|QSOX|Qscn6|SOx quiescin Q6 sulfhydryl oxidase 1 protein-coding common_peak2_103_531_0.553363431512455_9.33196415125742_10.7088408872294 chr12 69892185 69893659 + 10.7088408872294 NA promoter-TSS (NM_178628) promoter-TSS (NM_178628) -183 NM_178628 73991 Mm.474462 NM_178628 ENSMUSG00000021066 Atl1 4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a atlastin GTPase 1 protein-coding common_peak1_30_70_1.31693508522962_6.80821466211949_10.7074224165677-2 chr9 123941983 123942606 + 10.7074224165677 NA Intergenic Intergenic 26398 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding common_peak1_30_70_1.31693508522962_6.80821466211949_10.7074224165677 chr2 175869225 175869711 + 10.7074224165677 NA intron (NM_001177480, intron 1 of 4) RMER17B|LTR|ERVK 223 NM_001164689 626832 Mm.441314 NM_001164689 ENSMUSG00000078887 Gm6710 1600017I02Rik|2310011F05Rik|2900089K14Rik|3100002L24Rik|WF-4 predicted gene 6710 protein-coding common_peak1_150_1601_-0.377138047423159_10.4570894086971_10.7068702396963 chr15 78589003 78590294 + 10.7068702396963 NA Intergenic Intergenic -7399 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding unique_peak1_24_45_1.56245323607937_6.3047885740967_10.7034918177622 chr8 88650719 88651262 + 10.7034918177622 NA intron (NM_145857, intron 1 of 12) intron (NM_145857, intron 1 of 12) 3643 NM_145857 257632 Mm.222633 NM_145857 ENSMUSG00000055994 Nod2 ACUG|BLAU|CD|Card15|F830032C23Rik|IBD1|Nlrc2 nucleotide-binding oligomerization domain containing 2 protein-coding common_peak1_732_7683_0.156652660000661_12.9859681336659_10.7027477393448 chr8 106056377 106061945 + 10.7027477393448 NA promoter-TSS (NM_010901) promoter-TSS (NM_010901) -442 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding common_peak2_572_5577_0.182973803111768_12.5370191205842_10.7017694351972 chr17 33977260 33982408 + 10.7017694351972 NA Intergenic MER44A|DNA|TcMar-Tigger -1043 NR_004446 630499 Mm.440940 NM_001081015 H2-K2 EG630499|Gm7035|H-2K1|H-2K1K|H-2K2|H2-K1 histocompatibility 2, K region locus 2 pseudo common_peak2_119_656_0.502131494648086_9.61081530764637_10.701121978521 chr10 80264207 80265852 + 10.701121978521 NA promoter-TSS (NM_133188) promoter-TSS (NM_133188) 38 NM_133188 70248 Mm.148693 NM_133188 ENSMUSG00000069565 Dazap1 2410042M16Rik|mPrrp DAZ associated protein 1 protein-coding unique_peak2_15_191_-1.28870923759599_6.94060788192316_10.7008258582732-2 chr7 66309350 66310292 + 10.7008258582732 NA intron (NM_146191, intron 6 of 33) intron (NM_146191, intron 6 of 33) 71903 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak2_15_191_-1.28870923759599_6.94060788192316_10.7008258582732 chr10 67497021 67498089 + 10.7008258582732 NA Intergenic Intergenic -40314 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding common_peak1_68_709_-0.58907989414525_9.17713526731942_10.6991298933483 chr2 25228098 25228833 + 10.6991298933483 NA TTS (NM_080854) TTS (NM_080854) -3763 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding common_peak1_121_672_0.496669067623012_9.64279722842182_10.698780981745 chr10 44003089 44004498 + 10.698780981745 NA exon (NM_172393, exon 1 of 20) exon (NM_172393, exon 1 of 20) 1053 NM_172393 11630 Mm.292082 NM_172393 ENSMUSG00000019866 Aim1 AI462491|AI463325 absent in melanoma 1 protein-coding common_peak2_94_982_-0.492577816065369_9.6947586983079_10.6961532680809 chr6 143098854 143100710 + 10.6961532680809 NA 5' UTR (NM_029897, exon 2 of 25) 5' UTR (NM_029897, exon 2 of 25) 370 NM_001286578 74741 Mm.130260 NM_029081 ENSMUSG00000030279 C2cd5 5730419I09Rik|C030008B15Rik|CDP138 C2 calcium-dependent domain containing 5 protein-coding common_peak2_201_1376_0.356147660656848_10.6053866744634_10.6880380318755 chr11 23665163 23666898 + 10.6880380318755 NA promoter-TSS (NM_023651) promoter-TSS (NM_023651) 54 NM_028304 74467 Mm.29536 NM_028304 ENSMUSG00000020280 Pus10 2810013G11Rik|4933435A13Rik|AU014648|C77560|Ccdc139 pseudouridylate synthase 10 protein-coding common_peak1_27_57_1.42858375489035_6.57227287257275_10.6878676562689 chr4 129913409 129913992 + 10.6878676562689 NA Intergenic RLTR28|LTR|ERVL 7474 NR_045190 319894 Mm.59196 NR_045190 ENSMUSG00000086369 E330017L17Rik - RIKEN cDNA E330017L17 gene ncRNA common_peak2_327_2665_0.260819133535522_11.5108706318567_10.6866816732654 chr13 17693950 17696672 + 10.6866816732654 NA promoter-TSS (NM_025479) promoter-TSS (NM_025479) -102 NM_025479 66308 Mm.291109 NM_025479 ENSMUSG00000012429 Mplkip 2810021B07Rik|C330007M08Rik|Ttdn1 M-phase specific PLK1 intereacting protein protein-coding common_peak1_102_1068_-0.470498253943751_9.82679701074861_10.6860814146614 chr4 139352030 139353193 + 10.6860814146614 NA promoter-TSS (NM_001039200) promoter-TSS (NM_001039200) 24 NM_146157 230866 Mm.394288 NM_146157 ENSMUSG00000078517 Emc1 2700016F22Rik ER membrane protein complex subunit 1 protein-coding common_peak2_136_795_0.45971293599121_9.86648108853925_10.6852396929205 chr11 102229262 102230842 + 10.6852396929205 NA promoter-TSS (NR_106179) promoter-TSS (NR_106179) 98 NR_106179 102465892 NR_106179 ENSMUSG00000098863 Mir8101 Gm27705|mmu-mir-8101 microRNA 8101 ncRNA common_peak1_68_283_0.732848200742113_8.51617121987574_10.6849128505962-2 chr6 54933734 54935198 + 10.6849128505962 NA exon (NM_001171007, exon 8 of 12) exon (NM_001171007, exon 8 of 12) 37195 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak1_68_283_0.732848200742113_8.51617121987574_10.6849128505962 chr1 155812198 155813357 + 10.6849128505962 NA exon (NM_023268, exon 1 of 13) exon (NM_023268, exon 1 of 13) 122 NM_023268 104009 Mm.27035 NM_023268 ENSMUSG00000033684 Qsox1 1300003H02Rik|QSOX|Qscn6|SOx quiescin Q6 sulfhydryl oxidase 1 protein-coding common_peak1_118_1242_-0.43253821081284_10.0633414756461_10.6838005153762 chr13 92241724 92243079 + 10.6838005153762 NA intron (NM_010829, intron 19 of 23) intron (NM_010829, intron 19 of 23) -112382 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding common_peak2_44_139_0.996895620619665_7.6277308272548_10.6825123498962 chr2 5063425 5064136 + 10.6825123498962 NA intron (NM_181848, intron 1 of 14) CpG 158 NM_181848 71648 Mm.116942 NM_181848 ENSMUSG00000026672 Optn 4930441O07Rik|FIP2|HYPL|NRP optineurin protein-coding common_peak2_438_3930_0.216420845587109_12.0488910712176_10.680497840817 chr4 133128441 133132801 + 10.680497840817 NA promoter-TSS (NM_153423) promoter-TSS (NM_153423) -12 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak2_174_1878_-0.3461980500182_10.702650326411_10.6783516778535 chr15 88750332 88752869 + 10.6783516778535 NA promoter-TSS (NM_181412) promoter-TSS (NM_181412) -111 NM_181412 223773 Mm.396622 NM_181412 ENSMUSG00000034333 Zbed4 1700009F06Rik zinc finger, BED type containing 4 protein-coding unique_peak1_15_15_2.29625326312517_5.14812663156258_10.6777404474866-3 chr7 89215840 89216080 + 10.6777404474866 NA intron (NM_028343, intron 5 of 14) MTC|LTR|ERVL-MaLR 122827 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding unique_peak1_15_15_2.29625326312517_5.14812663156258_10.6777404474866-2 chr14 14065591 14066006 + 10.6777404474866 NA intron (NM_139227, intron 4 of 11) intron (NM_139227, intron 4 of 11) 53307 NM_139227 246103 Mm.133625 NM_139227 ENSMUSG00000021738 Atxn7 A430107N12Rik|AI627028|Sca7|ataxin-7 ataxin 7 protein-coding unique_peak1_15_15_2.29625326312517_5.14812663156258_10.6777404474866-4 chr8 111550787 111551189 + 10.6777404474866 NA intron (NM_001168623, intron 1 of 4) intron (NM_001168623, intron 1 of 4) 12645 NM_001168623 170737 Mm.271578 NM_133206 ENSMUSG00000033545 Znrf1 B830022L21Rik|Rnf42|Zrfp1|nin283 zinc and ring finger 1 protein-coding unique_peak1_15_15_2.29625326312517_5.14812663156258_10.6777404474866 chr10 120621413 120621729 + 10.6777404474866 NA Intergenic Intergenic -144161 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_263_1988_0.299329320386205_11.1074922210268_10.6777342576102 chr17 71474525 71476259 + 10.6777342576102 NA promoter-TSS (NM_028887) promoter-TSS (NM_028887) -49 NM_028887 74355 Mm.194450 NM_028887 ENSMUSG00000024054 Smchd1 4931400A14Rik|AW554188|MommeD1|mKIAA0650 SMC hinge domain containing 1 protein-coding unique_peak2_26_293_-0.977464777996769_7.71093995583798_10.6766117840281 chr9 64823617 64825553 + 10.6766117840281 NA intron (NM_001162917, intron 2 of 34) intron (NM_001162917, intron 2 of 34) 13574 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak2_87_413_0.619535407567339_9.00325466128299_10.6741052186231 chr6 136530277 136532671 + 10.6741052186231 NA intron (NM_019426, intron 1 of 14) B1F|SINE|Alu 12623 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak2_264_1998_0.298784595576807_11.114455054533_10.6736995285931 chr15 77969661 77971962 + 10.6736995285931 NA promoter-TSS (NM_018749) promoter-TSS (NM_018749) 13 NM_018749 55944 Mm.3955 NM_018749 ENSMUSG00000016554 Eif3d 66/67kDa|AA407891|Eif3s7|eIF3p66 eukaryotic translation initiation factor 3, subunit D protein-coding common_peak1_19_227_-1.14175578653396_7.26201212089776_10.6714321325466 chr13 97408571 97409170 + 10.6714321325466 NA Intergenic ORR1G|LTR|ERVL-MaLR -26100 NR_110432 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 ENSMUSG00000078952|Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA common_peak1_16_200_-1.24751543020476_7.02729397607655_10.6704014759842 chr1 85687647 85688021 + 10.6704014759842 NA intron (NM_013673, intron 11 of 19) B4A|SINE|B4 37846 NM_001313714 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding common_peak1_13_172_-1.37467578880515_6.74729033323415_10.6680052818043 chr6 113663746 113664114 + 10.6680052818043 NA intron (NM_001113553, intron 2 of 11) B1_Mus1|SINE|Alu 25463 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding common_peak1_29_322_-0.926733922096221_7.87202339364581_10.6668646211658 chr6 129642455 129643127 + 10.6668646211658 NA exon (NM_021378, exon 2 of 5) exon (NM_021378, exon 2 of 5) 497 NM_021378 58179 Mm.358684 NM_021378 ENSMUSG00000033027 Klrc3 Klrc2|Nkg2e killer cell lectin-like receptor subfamily C, member 3 protein-coding common_peak1_139_820_0.453431925118441_9.90795437433703_10.6665037595731 chr1 91250245 91251195 + 10.6665037595731 NA intron (NM_026454, intron 1 of 9) CpG 401 NM_026454 67921 Mm.337238 NM_026454 ENSMUSG00000034343 Ube2f 2510010F15Rik|AI851109 ubiquitin-conjugating enzyme E2F (putative) protein-coding common_peak1_196_2137_-0.32293952109519_10.9005763771729_10.6651518688256 chr5 99977218 99979016 + 10.6651518688256 NA intron (NM_001077265, intron 1 of 8) CpG 821 NM_001077266 11991 Mm.150231 NM_007516 ENSMUSG00000000568 Hnrnpd Auf1|Hnrpd heterogeneous nuclear ribonucleoprotein D protein-coding common_peak1_146_880_0.438012544143554_10.0020044809922_10.6638069282013 chr1 128765800 128768045 + 10.6638069282013 NA Intergenic Intergenic -174623 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_33_360_-0.865706454726643_8.06300179952385_10.662492517003 chr12 105032665 105033247 + 10.662492517003 NA promoter-TSS (NR_003145) promoter-TSS (NR_003145) 338 NM_028419 73046 Mm.29128 NM_028419 ENSMUSG00000021102 Glrx5 - glutaredoxin 5 protein-coding common_peak2_64_668_-0.608947880308564_9.08138846048718_10.6624202029006 chr14 50784398 50786074 + 10.6624202029006 NA intron (NM_001080949, intron 1 of 9) intron (NM_001080949, intron 1 of 9) 284 NM_177625 219022 Mm.276362 NM_177625 ENSMUSG00000006288 Ttc5 - tetratricopeptide repeat domain 5 protein-coding common_peak1_18_218_-1.17442285620428_7.18757563149903_10.6580280157235 chr1 178186979 178187365 + 10.6580280157235 NA promoter-TSS (NM_024282) promoter-TSS (NM_024282) -245 NM_024282 78825 Mm.440132 NM_024282 ENSMUSG00000026502 Desi2 5830417C01Rik|DeSI-2|Fam152a|Pppde1 desumoylating isopeptidase 2 protein-coding common_peak2_73_316_0.698056932258359_8.65736749626859_10.6572709956146 chr5 113898878 113900462 + 10.6572709956146 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 9036 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak2_41_438_-0.773990174550503_8.39108204226011_10.6559108889401 chr4 129640041 129641764 + 10.6559108889401 NA promoter-TSS (NM_001005506) promoter-TSS (NM_001005506) -97 NM_001005506 109658 Mm.268863 NM_001005506 ENSMUSG00000053841 Txlna 2600010N21Rik|AI425952|AW209241|Il14|Txln taxilin alpha protein-coding common_peak1_41_438_-0.773990174550503_8.39108204226011_10.6559108889401 chr3 96489570 96490073 + 10.6559108889401 NA Intergenic IAPEz-int|LTR|ERVK -35364 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding common_peak1_428_3813_0.219235734422956_12.0067069955242_10.6547423404844 chr7 66108592 66112904 + 10.6547423404844 NA intron (NM_001081163, intron 1 of 2) intron (NM_001081163, intron 1 of 2) 1233 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_31_341_-0.894986940574373_7.97035904459871_10.6538661013232 chr3 51636645 51637266 + 10.6538661013232 NA Intergenic Intergenic -24224 NM_174995 211666 Mm.24679 NM_174995 ENSMUSG00000074604 Mgst2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding common_peak2_127_1341_-0.414078759515947_10.1831295764422_10.6530063937261 chr4 123576514 123579275 + 10.6530063937261 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -38526 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak2_752_7958_0.15356053601743_13.0351517289586_10.6527420297455 chr17 83275100 83279635 + 10.6527420297455 NA Intergenic Intergenic 62084 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding common_peak1_92_960_-0.49757589988616_9.65960467083067_10.6516383027233 chr9 22070847 22071982 + 10.6516383027233 NA promoter-TSS (NM_001310759) promoter-TSS (NM_001310759) -38 NM_001310759 319601 Mm.347707 NM_177318 ENSMUSG00000038895 Zfp653 E430039K05Rik|Znf653 zinc finger protein 653 protein-coding common_peak1_60_627_-0.630101297844655_8.9795700999693_10.6477011199885 chr19 40513094 40513844 + 10.6477011199885 NA 5' UTR (NM_178362, exon 1 of 29) 5' UTR (NM_178362, exon 1 of 29) 267 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak2_260_1958_0.301030664551549_11.0864170145434_10.6475425171093 chr5 146832015 146833917 + 10.6475425171093 NA promoter-TSS (NM_019647) promoter-TSS (NM_019647) 76 NM_019647 19933 Mm.316592 NM_019647 ENSMUSG00000041453 Rpl21 8430440E03Rik|L21 ribosomal protein L21 protein-coding common_peak2_46_487_-0.727606250136869_8.56693421249445_10.6429045371809 chrX 167023821 167026125 + 10.6429045371809 NA Intergenic MTEa|LTR|ERVL-MaLR 45397 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak2_76_791_-0.552635079306544_9.35303908042634_10.6411911386957 chrX 42401116 42404873 + 10.6411911386957 NA Intergenic Intergenic -99571 NM_011364 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak1_88_917_-0.509331974649619_9.587684356089_10.6388118284781 chr7 100862699 100863526 + 10.6388118284781 NA intron (NM_177073, intron 1 of 10) CpG 301 NM_177073 320100 Mm.40336 NM_177073 ENSMUSG00000008318 Relt E430021K24Rik|Tnfrsf19l RELT tumor necrosis factor receptor protein-coding common_peak2_70_729_-0.578593107920362_9.2224560998072_10.6375678240757 chr5 93107494 93109765 + 10.6375678240757 NA intron (NM_001310669, intron 1 of 10) ID_B1|SINE|B4 15213 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_70_729_-0.578593107920362_9.2224560998072_10.6375678240757 chrX 12134296 12135495 + 10.6375678240757 NA intron (NR_045434, intron 3 of 3) intron (NR_045434, intron 3 of 3) 25451 NR_045434 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding unique_peak2_6_107_-1.92154737451825_5.79411381490434_10.633424019003 chr7 45107049 45107822 + 10.633424019003 NA Intergenic B4A|SINE|B4 -3613 NM_010189 14132 Mm.3303 NM_010189 ENSMUSG00000003420 Fcgrt FcRn Fc receptor, IgG, alpha chain transporter protein-coding common_peak1_179_1172_0.383415961908835_10.3876952789829_10.6313269804512 chr17 35088905 35089956 + 10.6313269804512 NA exon (NM_178592, exon 1 of 20) exon (NM_178592, exon 1 of 20) 139 NM_178592 193742 Mm.43745 NM_178592 ENSMUSG00000007036 Abhd16a AI326074|Bat-5|Bat5|D17H6S82E|NG26 abhydrolase domain containing 16A protein-coding common_peak1_132_1397_-0.405248332713075_10.2465244790189_10.6280005675285 chr13 23554947 23556463 + 10.6280005675285 NA exon (NM_145713, exon 1 of 1) exon (NM_145713, exon 1 of 1) 673 NM_145713 14957 Mm.247046 NM_145713 ENSMUSG00000052565 Hist1h1d H1.3|H1D|H1f3|H1s-4 histone cluster 1, H1d protein-coding common_peak1_188_2041_-0.330023474772736_10.8307554134914_10.6261082243848 chr11 102407069 102409167 + 10.6261082243848 NA promoter-TSS (NM_026542) promoter-TSS (NM_026542) -601 NM_026542 68066 Mm.44226 NM_026542 ENSMUSG00000018677 Slc25a39 3010027G13Rik|D11Ertd333e solute carrier family 25, member 39 protein-coding common_peak2_260_2917_-0.273831821098755_11.3738482573685_10.6221736357125 chrX 94120740 94124027 + 10.6221736357125 NA intron (NM_001044386, intron 1 of 8) CpG 1024 NM_011768 22764 Mm.919 NM_011768 ENSMUSG00000079509 Zfx Zfx5|Zfx5,6|Zfx6 zinc finger protein X-linked protein-coding common_peak1_55_202_0.847841144019105_8.08925648919473_10.6213152996947 chr7 128042258 128043230 + 10.6213152996947 NA Intergenic Intergenic -19896 NM_001082960 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding unique_peak2_10_144_-1.54672365850734_6.40654726076126_10.6200126265294 chr9 122998316 122999495 + 10.6200126265294 NA intron (NM_010620, intron 20 of 34) intron (NM_010620, intron 20 of 34) -22421 NM_025339 66079 Mm.482265 NM_025339 ENSMUSG00000066233 Tmem42 0610027O18Rik|4933429E06Rik|AV003444|D9Ertd662e transmembrane protein 42 protein-coding unique_peak1_26_53_1.46732006467613_6.48854753450153_10.6194875738408-2 chr2 12924073 12924640 + 10.6194875738408 NA intron (NM_008961, intron 1 of 4) intron (NM_008961, intron 1 of 4) 315 NM_001305437 19212 Mm.229322 NM_008961 ENSMUSG00000026730 Pter AI790318|Mpr56-1 phosphotriesterase related protein-coding common_peak1_26_53_1.46732006467613_6.48854753450153_10.6194875738408 chr3 135825022 135825657 + 10.6194875738408 NA promoter-TSS (NM_001135149) promoter-TSS (NM_001135149) 60 NM_026228 67547 Mm.30239 NM_026228 ENSMUSG00000053897 Slc39a8 4933419D20Rik|AA986696|BIGM103|ZIP-8|Zip8 solute carrier family 39 (metal ion transporter), member 8 protein-coding unique_peak1_26_53_1.46732006467613_6.48854753450153_10.6194875738408 chr13 58067198 58067930 + 10.6194875738408 NA intron (NM_001195075, intron 6 of 16) intron (NM_001195075, intron 6 of 16) 34864 NM_001195075 100503085 Mm.379256 NM_001195075 ENSMUSG00000014164 Klhl3 7530408C15Rik|AI430941|EG627648 kelch-like 3 protein-coding common_peak1_34_369_-0.849935745992779_8.10641358751992_10.6190918994752-2 chr6 142569970 142570723 + 10.6190918994752 NA exon (NM_008428, exon 2 of 3) exon (NM_008428, exon 2 of 3) 1010 NM_008428 16523 Mm.1482 NM_008428 ENSMUSG00000030247 Kcnj8 AI448900|Kir6.1|gnite|slmbr|sltr|uKATP-1 potassium inwardly-rectifying channel, subfamily J, member 8 protein-coding common_peak1_34_369_-0.849935745992779_8.10641358751992_10.6190918994752 chr1 161728713 161729588 + 10.6190918994752 NA Intergenic Intergenic 59345 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_99_1034_-0.476175237877593_9.77732743344789_10.6182001124508 chr6 51058967 51061871 + 10.6182001124508 NA Intergenic Intergenic 209491 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA common_peak1_56_208_0.837139587469291_8.12592892581553_10.6176924945499 chr17 32523427 32524371 + 10.6176924945499 NA intron (NM_001101445, intron 6 of 12) intron (NM_001101445, intron 6 of 12) -12730 NM_024442 70101 Mm.30504 NM_024442 ENSMUSG00000048440 Cyp4f16 2310021J05Rik|AI746515 cytochrome P450, family 4, subfamily f, polypeptide 16 protein-coding common_peak2_121_673_0.49452698105147_9.64386827170759_10.6173185274729 chr2 153240382 153242155 + 10.6173185274729 NA promoter-TSS (NM_018807) promoter-TSS (NM_018807) 90 NM_018807 54711 Mm.103199 NM_018807 ENSMUSG00000051413 Plagl2 AU018672|AW552839|mKIAA0198 pleiomorphic adenoma gene-like 2 protein-coding common_peak2_167_1064_0.400673862244366_10.2569746462354_10.6168977641609 chr6 148944118 148947143 + 10.6168977641609 NA intron (NM_019643, intron 1 of 5) CpG 802 NM_019643 56306 Mm.18637 NM_019643 ENSMUSG00000039985 Fam60a Ppcs1|Pptcs1|Tera family with sequence similarity 60, member A protein-coding common_peak2_493_6011_-0.187647864258285_12.4598053617872_10.6140822315426 chr2 32491648 32497525 + 10.6140822315426 NA Intergenic Intergenic -40773 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak1_61_239_0.786403920312144_8.30009255576459_10.6105493422777 chr4 121004252 121005748 + 10.6105493422777 NA intron (NM_133716, intron 1 of 9) MTD|LTR|ERVL-MaLR 12247 NM_133716 69780 Mm.271819 NM_133716 ENSMUSG00000032870 Smap2 1810031K02Rik|AA408614|Smap1l small ArfGAP 2 protein-coding common_peak1_136_796_0.457901642544387_9.86738673526267_10.6103331673372 chr14 26206268 26207218 + 10.6103331673372 NA promoter-TSS (NM_001270496) promoter-TSS (NM_001270496) -124 NM_025311 66039 Mm.33344 NM_025311 ENSMUSG00000072676 Tmem254a 0610008K04Rik|0610010A22Rik|AA960404|D14Ertd449e|Tmem254 transmembrane protein 254a protein-coding common_peak1_43_457_-0.752793734216636_8.46280692098863_10.6079740201263 chr3 19318710 19319361 + 10.6079740201263 NA Intergenic PB1D10|SINE|Alu -7713 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak2_106_1109_-0.457373541881696_9.88765719029662_10.6064054815533 chr11 5998703 6001904 + 10.6064054815533 NA intron (NM_001174053, intron 4 of 19) intron (NM_001174053, intron 4 of 19) 44545 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding common_peak1_12_162_-1.4199192207765_6.63876854384283_10.6052868605549 chr1 164935994 164936370 + 10.6052868605549 NA promoter-TSS (NM_008510) promoter-TSS (NM_008510) -672 NM_008510 16963 Mm.190 NM_008510 ENSMUSG00000026573 Xcl1 AI661682|ATAC|LTN|Lptn|SCM-1|SCM-1a|Scyc1 chemokine (C motif) ligand 1 protein-coding unique_peak2_12_162_-1.4199192207765_6.63876854384283_10.6052868605549-2 chr9 13245195 13245870 + 10.6052868605549 NA exon (NM_001033181, exon 1 of 1) exon (NM_001033181, exon 1 of 1) 209 NM_001033181 77532 Mm.459434 NM_001033181 ENSMUSG00000079083 Jrkl C030035D04Rik|HHMJG Jrk-like protein-coding unique_peak2_12_162_-1.4199192207765_6.63876854384283_10.6052868605549 chr19 6992702 6993380 + 10.6052868605549 NA promoter-TSS (NM_020566) promoter-TSS (NM_020566) -769 NM_020566 57431 Mm.10721 NM_020566 ENSMUSG00000024963 Dnajc4 2010301J22Rik|Hspf2|Mcg18 DnaJ heat shock protein family (Hsp40) member C4 protein-coding common_peak1_212_1482_0.34299117954567_10.7057984722275_10.6048128641595 chr14 21499665 21501480 + 10.6048128641595 NA intron (NM_017479, intron 1 of 16) CpG 787 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding common_peak1_78_811_-0.54323682607186_9.39371750414925_10.6015393195599 chr9 15279365 15280477 + 10.6015393195599 NA promoter-TSS (NM_144933) promoter-TSS (NM_144933) -54 NM_144933 234959 Mm.44151 NM_144933 ENSMUSG00000031935 Med17 77kDa|C330002H14Rik|Crsp6|Trap80 mediator complex subunit 17 protein-coding unique_peak2_8_125_-1.6992068728136_6.12767648709311_10.6008295047749 chr7 141480894 141481719 + 10.6008295047749 NA intron (NM_001252588, intron 1 of 7) intron (NM_001252588, intron 1 of 7) 4926 NM_001252588 64540 Mm.489619 NM_053082 ENSMUSG00000025511 Tspan4 AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4 tetraspanin 4 protein-coding common_peak1_33_84_1.22075763602283_7.01976975414911_10.600407927828-3 chr6 99375392 99376046 + 10.600407927828 NA intron (NM_053202, intron 1 of 18) B4A|SINE|B4 59626 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_33_84_1.22075763602283_7.01976975414911_10.600407927828-4 chr8 111537102 111537680 + 10.600407927828 NA promoter-TSS (NM_001168623) promoter-TSS (NM_001168623) 751 NM_001168621 170737 Mm.271578 NM_133206 ENSMUSG00000033545 Znrf1 B830022L21Rik|Rnf42|Zrfp1|nin283 zinc and ring finger 1 protein-coding common_peak1_33_84_1.22075763602283_7.01976975414911_10.600407927828 chr12 102698065 102698853 + 10.600407927828 NA intron (NM_172584, intron 1 of 9) intron (NM_172584, intron 1 of 9) 6410 NM_172584 217837 Mm.482192 NM_172584 ENSMUSG00000057963 Itpk1 BC031182 inositol 1,3,4-triphosphate 5/6 kinase protein-coding common_peak1_33_84_1.22075763602283_7.01976975414911_10.600407927828-2 chr18 12941458 12942114 + 10.600407927828 NA promoter-TSS (NM_207530) promoter-TSS (NM_207530) 55 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak1_131_1385_-0.406166972103623_10.2336280560854_10.5997926859946 chr19 6980030 6981227 + 10.5997926859946 NA promoter-TSS (NM_001166368) promoter-TSS (NM_001166368) -167 NM_001166368 14227 Mm.4234 NM_008020 ENSMUSG00000056629 Fkbp2 13kDa|FKBP-2|mFKBP13|mFKBP2 FK506 binding protein 2 protein-coding common_peak1_32_350_-0.878007272643681_8.01632358398272_10.5997258941363 chr2 150307271 150308008 + 10.5997258941363 NA Intergenic Intergenic 50122 NM_001142410 100216455 Mm.484816 NM_001142410 ENSMUSG00000079008 Gm14124 EG640962|ENSMUSG00000074735|Gm10749|OTTMUSG00000015734 predicted gene 14124 protein-coding common_peak1_40_427_-0.780023721335721_8.35145512573329_10.5996806704931 chr13 21717430 21718250 + 10.5996806704931 NA TTS (NM_178182) TTS (NM_178182) 212 NM_178206 319152 Mm.377874 NM_178206 ENSMUSG00000101355 Hist1h3h H3-291 histone cluster 1, H3h protein-coding common_peak1_40_427_-0.780023721335721_8.35145512573329_10.5996806704931-2 chr18 34778521 34779423 + 10.5996806704931 NA intron (NM_001081256, intron 1 of 23) intron (NM_001081256, intron 1 of 23) 1964 NM_001081256 277250 Mm.277906 NM_029518 ENSMUSG00000038773 Kdm3b 5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082 KDM3B lysine (K)-specific demethylase 3B protein-coding common_peak1_40_427_-0.780023721335721_8.35145512573329_10.5996806704931-3 chr7 127253615 127254188 + 10.5996806704931 NA exon (NM_177362, exon 3 of 3) exon (NM_177362, exon 3 of 3) 6766 NM_023203 66422 Mm.29898 NM_023203 ENSMUSG00000042462 Dctpp1 2410015N17Rik|AI854235|RS21-C6 dCTP pyrophosphatase 1 protein-coding common_peak1_41_124_1.03830267032277_7.48493561982347_10.5981442674898 chr7 141097733 141098333 + 10.5981442674898 NA intron (NM_023059, intron 1 of 9) Lx2B|LINE|L1 2513 NM_023059 24058 Mm.38017 NM_023059 ENSMUSG00000025494 Sigirr AI256711|TIR8 single immunoglobulin and toll-interleukin 1 receptor (TIR) domain protein-coding common_peak1_76_337_0.675842104490883_8.73880048852762_10.5975997090021 chr2 11534698 11536093 + 10.5975997090021 NA intron (NM_001177758, intron 1 of 14) CpG 18534 NM_001177758 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding unique_peak2_14_181_-1.32575051878735_6.84491938080502_10.5972757129667 chr17 34072124 34073085 + 10.5972757129667 NA Intergenic Intergenic -19775 NM_008206 15001 Mm.116 NM_008206 ENSMUSG00000024334 H2-Oa H-2Oa histocompatibility 2, O region alpha locus protein-coding common_peak2_291_2281_0.279460572469659_11.2958133625235_10.5971857631124 chr8 119837353 119841318 + 10.5971857631124 NA intron (NM_028071, intron 2 of 3) intron (NM_028071, intron 2 of 3) 1244 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak1_198_2160_-0.32050156301209_10.9172325753535_10.5928210451689 chr19 12572789 12575059 + 10.5928210451689 NA intron (NM_026640, intron 1 of 3) intron (NM_026640, intron 1 of 3) 399 NM_026640 107373 Mm.1643 NM_026640 ENSMUSG00000024691 Fam111a 4632417K18Rik|AW413625 family with sequence similarity 111, member A protein-coding unique_peak2_52_545_-0.67701537547674_8.75424945318148_10.592665539236 chrX 36473720 36476375 + 10.592665539236 NA Intergenic Intergenic 71570 NR_044989 621901 Mm.491051 NR_044989 Gm6268 EG621901 predicted gene 6268 ncRNA common_peak1_50_526_-0.693988374509757_8.69466496438234_10.5914906071624 chr9 44379568 44380327 + 10.5914906071624 NA intron (NM_021395, intron 1 of 25) intron (NM_021395, intron 1 of 25) 457 NM_021395 12282 Mm.116721 NM_021395 ENSMUSG00000032115 Hyou1 AI415631|CBP-140|Cab140|Grp170|Orp150 hypoxia up-regulated 1 protein-coding unique_peak1_19_27_1.88377930557317_5.74924457484419_10.5913494090182-2 chr18 37910001 37910429 + 10.5913494090182 NA intron (NM_001305980, intron 1 of 27) intron (NM_001305980, intron 1 of 27) 25208 NM_001305980 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding unique_peak1_19_27_1.88377930557317_5.74924457484419_10.5913494090182 chr1 43529408 43529918 + 10.5913494090182 NA intron (NM_010879, intron 2 of 4) intron (NM_010879, intron 2 of 4) 83912 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_223_1589_0.331590633405275_10.8006063668744_10.5909410567746 chr12 101011756 101014710 + 10.5909410567746 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 8535 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA unique_peak1_21_34_1.73051472574898_5.99454037981946_10.5892504166682 chr13 81352320 81352818 + 10.5892504166682 NA intron (NM_054053, intron 83 of 89) intron (NM_054053, intron 83 of 89) 280575 NM_054053 110789 Mm.288694 NM_054053 ENSMUSG00000069170 Adgrv1 Frings|Gpr98|Mass1|Mgr1|VLGR1 adhesion G protein-coupled receptor V1 protein-coding common_peak1_27_302_-0.956609233455026_7.76486936674544_10.5859132003507 chr11 120484592 120485169 + 10.5859132003507 NA TTS (NM_008244) TTS (NM_008244) 211 NM_027204 56282 Mm.133851 NM_027204 ENSMUSG00000039640 Mrpl12 0610034O11Rik|1500031N16Rik|MRP-L12|Rpml12 mitochondrial ribosomal protein L12 protein-coding common_peak2_248_1837_0.309719334032597_10.9987807183053_10.5834661202489 chr7 66134530 66141672 + 10.5834661202489 NA intron (NM_001081163, intron 2 of 2) RSINE1|SINE|B4 28586 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_461_4207_0.208549378820404_12.1431936787025_10.582511734149 chr4 152444632 152449322 + 10.582511734149 NA intron (NM_010598, intron 1 of 15) B4A|SINE|B4 1878 NM_001252655 16498 Mm.388924 NM_010598 ENSMUSG00000028931 Kcnab2 F5|I2rf5|Kcnb3|kv-beta-2 potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein-coding common_peak1_336_3885_-0.234887370441715_11.8066265003645_10.5816917304458 chr9 57637241 57641920 + 10.5816917304458 NA intron (NM_001304761, intron 2 of 14) intron (NM_001304761, intron 2 of 14) 6073 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak1_16_18_2.15560874753059_5.32573188720888_10.5803991819957 chr1 106646375 106646780 + 10.5803991819957 NA intron (NM_009741, intron 1 of 1) Lx|LINE|L1 67713 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding unique_peak1_16_18_2.15560874753059_5.32573188720888_10.5803991819957-2 chr5 74417311 74417745 + 10.5803991819957 NA intron (NM_001286437, intron 4 of 7) intron (NM_001286437, intron 4 of 7) 114214 NM_178672 212986 Mm.134147 NM_178672 ENSMUSG00000062110 Scfd2 E430013M20Rik|STXBP1L1 Sec1 family domain containing 2 protein-coding unique_peak1_16_18_2.15560874753059_5.32573188720888_10.5803991819957 chr19 41402497 41402994 + 10.5803991819957 NA Intergenic Intergenic -17675 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_31_75_1.27493806086794_6.88539654387755_10.5792341637232 chr8 12757009 12757597 + 10.5792341637232 NA non-coding (NR_121603, exon 1 of 30) non-coding (NR_121603, exon 1 of 30) 287 NM_001293667 50770 Mm.257837 NM_015804 ENSMUSG00000031441 Atp11a 4930558F19Rik|AU040868|Atpc1h|Ih ATPase, class VI, type 11A protein-coding common_peak1_42_129_1.0233593572255_7.5340474916412_10.5790553163044 chr3 52879930 52880937 + 10.5790553163044 NA Intergenic Lx2A1|LINE|L1 47233 NR_040555 622124 Mm.389434 NR_040555 ENSMUSG00000104401 Gm20750 - predicted gene, 20750 ncRNA common_peak1_62_646_-0.616012742040725_9.02961553097214_10.5790284198162 chr1 92802640 92803658 + 10.5790284198162 NA Intergenic (GGA)n|Simple_repeat|Simple_repeat -28537 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_165_1771_-0.355044708200314_10.6136405344549_10.5783495784772 chr2 90939809 90941807 + 10.5783495784772 NA intron (NM_198683, intron 1 of 13) CpG 411 NM_017368 13046 Mm.29495 NM_017368 ENSMUSG00000005506 Celf1 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp1|D2Wsu101e|HNAB50|NAB50 CUGBP, Elav-like family member 1 protein-coding common_peak2_166_1056_0.400986944305277_10.2462531335353_10.5715386541489 chr5 36694884 36696584 + 10.5715386541489 NA intron (NM_001081232, intron 1 of 8) CpG 287 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding unique_peak2_11_152_-1.47022468578691_6.5222754997992_10.568550878315 chr11 54998143 54999582 + 10.568550878315 NA intron (NM_013472, intron 13 of 25) intron (NM_013472, intron 13 of 25) 34609 NM_001110211 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding unique_peak1_13_10_2.60052082019427_4.75969202873443_10.5675656044648-3 chr5 31578007 31578355 + 10.5675656044648 NA Intergenic Intergenic -6784 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA unique_peak1_13_10_2.60052082019427_4.75969202873443_10.5675656044648-2 chr12 98833199 98833602 + 10.5675656044648 NA intron (NM_001081191, intron 21 of 43) intron (NM_001081191, intron 21 of 43) 62378 NM_001160108 75553 Mm.25549 NM_029334 ENSMUSG00000021012 Zc3h14 1010001P15Rik|1700016A15Rik|2700069A02Rik|AU014748 zinc finger CCCH type containing 14 protein-coding unique_peak1_13_10_2.60052082019427_4.75969202873443_10.5675656044648 chr10 121507542 121507923 + 10.5675656044648 NA Intergenic B1_Mus1|SINE|Alu -31482 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding common_peak2_193_2099_-0.32422293800372_10.8740621435516_10.5635704738259 chr12 69196029 69198715 + 10.5635704738259 NA non-coding (NR_033222, exon 1 of 2) non-coding (NR_033222, exon 1 of 2) 161 NR_033222 414085 Mm.256223 NR_033222 ENSMUSG00000097061 9330151L19Rik - RIKEN cDNA 9330151L19 gene ncRNA common_peak2_122_1284_-0.42197486286253_10.11656521265_10.5627843730044 chr2 167924140 167926417 + 10.5627843730044 NA Intergenic Intergenic -7049 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_96_480_0.575445279593367_9.19761572356673_10.5582653230708 chr2 101678145 101679663 + 10.5582653230708 NA intron (NM_001303273, intron 1 of 6) intron (NM_001303273, intron 1 of 6) 484 NM_001303273 22034 Mm.292729 NM_009424 ENSMUSG00000027164 Traf6 2310003F17Rik|AI851288|C630032O20Rik TNF receptor-associated factor 6 protein-coding common_peak1_69_717_-0.579782008113161_9.19794902976647_10.5582653230706 chr8 105854725 105855799 + 10.5582653230706 NA 5' UTR (NM_021513, exon 1 of 1) 5' UTR (NM_021513, exon 1 of 1) 159 NM_021513 59016 Mm.286598 NM_021513 ENSMUSG00000036442 Thap11 2810036E22Rik|AB041579|CTG-B43a|CTG-B45d|Ronin THAP domain containing 11 protein-coding common_peak2_69_717_-0.579782008113161_9.19794902976647_10.5582653230706 chr7 45706294 45708802 + 10.5582653230706 NA intron (NM_016974, intron 2 of 3) intron (NM_016974, intron 2 of 3) 2301 NM_016974 13170 Mm.24222 NM_016974 ENSMUSG00000059824 Dbp - D site albumin promoter binding protein protein-coding common_peak1_93_458_0.587393055198568_9.13604687101309_10.5524390572687 chr1 121430938 121431906 + 10.5524390572687 NA intron (NM_001025156, intron 1 of 23) intron (NM_001025156, intron 1 of 23) 355 NM_001025156 70829 Mm.25788 NM_027567 ENSMUSG00000026339 Ccdc93 4633402D15Rik|9230102M16Rik coiled-coil domain containing 93 protein-coding common_peak1_18_24_1.95650801362217_5.62211019658581_10.5505576876195-2 chr9 94668293 94668620 + 10.5505576876195 NA Intergenic Intergenic -1436 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding unique_peak1_18_24_1.95650801362217_5.62211019658581_10.5505576876195 chr1 36905057 36905529 + 10.5505576876195 NA intron (NM_018872, intron 1 of 40) RMER1B|Other|Other 34234 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding common_peak1_18_24_1.95650801362217_5.62211019658581_10.5505576876195 chr5 74038939 74039285 + 10.5505576876195 NA intron (NM_177561, intron 1 of 8) intron (NM_177561, intron 1 of 8) 29299 NM_177561 69727 Mm.48795 NM_177561 ENSMUSG00000054814 Usp46 1190009E20Rik|2410018I08Rik|AI451644 ubiquitin specific peptidase 46 protein-coding unique_peak1_18_24_1.95650801362217_5.62211019658581_10.5505576876195-2 chr1 162187200 162187608 + 10.5505576876195 NA intron (NM_172646, intron 14 of 19) (TG)n|Simple_repeat|Simple_repeat -30219 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak1_18_24_1.95650801362217_5.62211019658581_10.5505576876195-3 chr10 8134131 8134591 + 10.5505576876195 NA Intergenic Intergenic -178238 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding unique_peak1_18_24_1.95650801362217_5.62211019658581_10.5505576876195-4 chr18 67718675 67719184 + 10.5505576876195 NA intron (NM_001127177, intron 1 of 8) intron (NM_001127177, intron 1 of 8) 5692 NM_001127177 19255 Mm.260433 NM_008977 ENSMUSG00000024539 Ptpn2 AI325124|Ptpt|TC-PTP protein tyrosine phosphatase, non-receptor type 2 protein-coding common_peak1_29_321_-0.922260445516915_7.86978665535616_10.5501772705718 chr1 178369200 178369600 + 10.5501772705718 NA Intergenic Intergenic -31616 NM_016805 51810 Mm.86589 NM_016805 ENSMUSG00000039630 Hnrnpu AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U heterogeneous nuclear ribonucleoprotein U protein-coding common_peak1_86_407_0.620372488694358_8.98261158631867_10.5434810920511 chr7 123429322 123430870 + 10.5434810920511 NA intron (NM_025304, intron 10 of 10) intron (NM_025304, intron 10 of 10) -32198 NM_007474 11833 Mm.273175 NM_007474 ENSMUSG00000030762 Aqp8 AI255744|AQP-8 aquaporin 8 protein-coding common_peak1_78_351_0.66266747247602_8.79076535487531_10.5384571926845 chr15 5445639 5446522 + 10.5384571926845 NA Intergenic L1_Mus1|LINE|L1 -50238 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_21_245_-1.08271676264529_7.4011561240166_10.5355759620517-2 chr17 34605327 34605769 + 10.5355759620517 NA promoter-TSS (NM_001163379) promoter-TSS (NM_001163379) -313 NM_001163379 55979 Mm.8684 NM_018862 ENSMUSG00000034254 Agpat1 1-AGP|1-AGPAT|AW047140 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) protein-coding common_peak1_21_245_-1.08271676264529_7.4011561240166_10.5355759620517 chr13 85505751 85506219 + 10.5355759620517 NA Intergenic Intergenic -216499 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding unique_peak2_19_226_-1.13541425966014_7.25884135746085_10.5331895355176 chr13 83608507 83610096 + 10.5331895355176 NA intron (NM_025282, intron 4 of 10) intron (NM_025282, intron 4 of 10) 105267 NM_025282 17260 Mm.24001 NM_025282 ENSMUSG00000005583 Mef2c 5430401D19Rik|9930028G15Rik|AV011172|Mef2 myocyte enhancer factor 2C protein-coding common_peak2_134_780_0.461134415575936_9.83974594592995_10.5316007421945 chr6 30353176 30356682 + 10.5316007421945 NA Intergenic Intergenic 36081 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding common_peak1_82_379_0.639650260837401_8.88968073874965_10.5299945025845 chr17 46711472 46712196 + 10.5299945025845 NA exon (NM_145488, exon 1 of 17) exon (NM_145488, exon 1 of 17) 371 NM_145488 224824 Mm.299399 NM_145488 ENSMUSG00000002763 Pex6 AI132582|D130055I09Rik|mKIAA4177 peroxisomal biogenesis factor 6 protein-coding common_peak2_121_1273_-0.424017800022972_10.1031406622448_10.5282676523465 chr4 132268980 132270970 + 10.5282676523465 NA TTS (NR_002865) TTS (NR_002865) 211 NR_002865 353373 Mm.424675 NR_002865 Rnu11 MBII-407|Mirn801|mir-801|mmu-mir-801 U11 small nuclear RNA snRNA common_peak1_73_758_-0.5615601130177_9.28717601890662_10.5278799235502 chr11 3331040 3332376 + 10.5278799235502 NA intron (NM_178149, intron 1 of 5) (GGAA)n|Simple_repeat|Simple_repeat 977 NM_178149 216505 Mm.390323 NM_178149 ENSMUSG00000034614 Pik3ip1 1500004A08Rik|5830455E04Rik|Crkd|Hgfl phosphoinositide-3-kinase interacting protein 1 protein-coding common_peak1_134_1417_-0.399328663521601_10.2699774854787_10.5252453975196 chr1 171646591 171648975 + 10.5252453975196 NA intron (NM_144539, intron 2 of 7) intron (NM_144539, intron 2 of 7) 5254 NM_144539 75345 Mm.164642 NM_144539 ENSMUSG00000038179 Slamf7 19A|19A24|4930560D03Rik|CRACC|CS1 SLAM family member 7 protein-coding common_peak1_22_255_-1.06153919590649_7.46923040204675_10.524542735882 chr8 122183662 122184159 + 10.524542735882 NA Intergenic Intergenic -98231 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak2_16_199_-1.24031992880055_7.02369622537445_10.5235110821223 chr6 128974261 128975507 + 10.5235110821223 NA promoter-TSS (NR_106107).2 promoter-TSS (NR_106107).2 11 NR_106107 102465757 NR_106107 ENSMUSG00000098359 Mir7649 mmu-mir-7649 microRNA 7649 ncRNA common_peak2_36_99_1.13592746143669_7.21181992049307_10.521244763276 chr9 55326294 55326909 + 10.521244763276 NA promoter-TSS (NM_172923) promoter-TSS (NM_172923) -348 NM_172923 244886 Mm.24361 NM_172923 ENSMUSG00000032313 Tmem266 9630029F15|AI118078|HVRP1 transmembrane protein 266 protein-coding common_peak1_110_1152_-0.447258630287076_9.94754748250823_10.5177675596124 chr2 152780551 152782185 + 10.5177675596124 NA 3' UTR (NM_001289717, exon 3 of 3) 3' UTR (NM_001289717, exon 3 of 3) 27195 NM_053091 84682 Mm.196668 NM_053091 ENSMUSG00000009876 Cox4i2 Cox4b|CoxIV-2 cytochrome c oxidase subunit IV isoform 2 protein-coding common_peak1_18_217_-1.16782012138004_7.18427426408691_10.5171596081213 chr4 88046594 88047083 + 10.5171596081213 NA Intergenic B3A|SINE|B2 -13431 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak2_105_548_0.541691737624269_9.37150820781733_10.516905437499 chr1 161749577 161752084 + 10.516905437499 NA Intergenic Intergenic 37665 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_160_1003_0.410453359408207_10.1767702336549_10.5154314816603 chr2 181600575 181602072 + 10.5154314816603 NA promoter-TSS (NM_133701) promoter-TSS (NM_133701) 4 NM_133701 68879 Mm.292001 NM_133701 ENSMUSG00000002455 Prpf6 1190003A07Rik|2610031L17Rik|ANT-1|U5-102K pre-mRNA splicing factor 6 protein-coding common_peak2_85_883_-0.515563077951127_9.53012102041587_10.5138132940324 chr13 24760746 24762419 + 10.5138132940324 NA intron (NM_020567, intron 1 of 6) CpG 355 NM_020567 57441 Mm.12239 NM_020567 ENSMUSG00000006715 Gmnn AW546347|Gem geminin protein-coding common_peak1_259_1950_0.300141080096582_11.0800686026573_10.5133817734683 chr5 146832123 146833922 + 10.5133817734683 NA 5' UTR (NM_019647, exon 1 of 6) 5' UTR (NM_019647, exon 1 of 6) 132 NM_019647 19933 Mm.316592 NM_019647 ENSMUSG00000041453 Rpl21 8430440E03Rik|L21 ribosomal protein L21 protein-coding unique_peak2_17_208_-1.20267377020822_7.10602224697677_10.5132537636636 chr13 106835725 106837001 + 10.5132537636636 NA intron (NM_029665, intron 27 of 29) intron (NM_029665, intron 27 of 29) 100552 NM_029665 76582 Mm.132208 NM_029665 ENSMUSG00000042590 Ipo11 1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11 importin 11 protein-coding common_peak1_17_208_-1.20267377020822_7.10602224697677_10.5132537636636 chr19 46612816 46613194 + 10.5132537636636 NA intron (NM_001177812, intron 2 of 4) intron (NM_001177812, intron 2 of 4) -10396 NM_001177813 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_65_676_-0.59907976472776_9.10347214121112_10.5126781412195 chr15 88750828 88751634 + 10.5126781412195 NA promoter-TSS (NM_181412) promoter-TSS (NM_181412) -480 NM_181412 223773 Mm.396622 NM_181412 ENSMUSG00000034333 Zbed4 1700009F06Rik zinc finger, BED type containing 4 protein-coding common_peak2_215_2362_-0.304359413575185_11.0542242071863_10.5120695909306 chr14 73142115 73144409 + 10.5120695909306 NA intron (NR_033185, intron 1 of 15) CpG 477 NR_033185 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak2_186_1238_0.371957201961422_10.4609390731213_10.5120671227832 chr12 55446046 55448135 + 10.5120671227832 NA intron (NR_035430, intron 1 of 3) intron (NR_035430, intron 1 of 3) 45557 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak1_63_655_-0.608074119120204_9.05351494505798_10.5067967546883-2 chr12 99883613 99884388 + 10.5067967546883 NA promoter-TSS (NM_028354) promoter-TSS (NM_028354) -515 NM_028354 104884 Mm.312323 NM_028354 ENSMUSG00000021177 Tdp1 2810481F14Rik|4921509N21Rik|AI838772|AW493413|E430034L06Rik|MLZ-501|SCAN1 tyrosyl-DNA phosphodiesterase 1 protein-coding common_peak1_63_655_-0.608074119120204_9.05351494505798_10.5067967546883 chr10 86727092 86728194 + 10.5067967546883 NA intron (NM_153595, intron 3 of 4) intron (NM_153595, intron 3 of 4) 14878 NM_153595 103220 Mm.440762 NM_153595 ENSMUSG00000044937 Ttc41 AI449705|AU041509|Gnn tetratricopeptide repeat domain 41 protein-coding unique_peak2_28_62_1.37138339101265_6.66297161900624_10.5065767117401 chr16 32160634 32161320 + 10.5065767117401 NA intron (NM_146069, intron 2 of 3) intron (NM_146069, intron 2 of 3) 4499 NM_146069 224109 Mm.33498 NM_146069 ENSMUSG00000052384 Nrros E430025L02Rik|Lrcc33|Lrrc33 negative regulator of reactive oxygen species protein-coding unique_peak1_28_62_1.37138339101265_6.66297161900624_10.5065767117401 chr5 31267892 31268587 + 10.5065767117401 NA intron (NM_026298, intron 18 of 47) Lx8|LINE|L1 16533 NM_027221 69815 Mm.389609 NM_027221 ENSMUSG00000029149 Krtcap3 2010001C09Rik|AW321088|Kcp3 keratinocyte associated protein 3 protein-coding common_peak2_44_140_0.986627285165838_7.63286499498171_10.5064202642813 chr3 14869237 14869990 + 10.5064202642813 NA intron (NM_007606, intron 5 of 6) intron (NM_007606, intron 5 of 6) 6075 NM_007606 12350 Mm.300 NM_007606 ENSMUSG00000027559 Car3 BB219044|Ca3|Car-3 carbonic anhydrase 3 protein-coding common_peak2_88_915_-0.506185419332756_9.58611107843057_10.4997668090625 chr11 70969130 70971321 + 10.4997668090625 NA promoter-TSS (NM_001252413) promoter-TSS (NM_001252413) 25 NM_001252415 69723 Mm.275691 NM_027186 ENSMUSG00000018449 Rpain 2400006N03Rik|Rip RPA interacting protein protein-coding common_peak2_62_645_-0.613781194742142_9.02849975732285_10.4964700887967 chr6 113638320 113639605 + 10.4964700887967 NA intron (NM_001113553, intron 1 of 11) intron (NM_001113553, intron 1 of 11) 495 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding common_peak2_53_554_-0.667524083211518_8.78258191963171_10.4955612154473 chr17 12750384 12752205 + 10.4955612154473 NA intron (NM_010515, intron 1 of 47) intron (NM_010515, intron 1 of 47) 9983 NR_027784 104103 Mm.26553 NR_002853 ENSMUSG00000078247 Airn 2810051F02Rik|2810434M15Rik|AI256653|AI597500|AW049873|Air|B930018I07Rik|D17Ertd663e|IGF2RAS antisense Igf2r RNA ncRNA common_peak1_158_986_0.41297000714_10.1533912780264_10.4929452184139 chr3 87764700 87766600 + 10.4929452184139 NA intron (NM_001289601, intron 1 of 24) B1F|SINE|Alu 3303 NM_001032413 73182 Mm.158962 NM_028460 ENSMUSG00000028073 Pear1 3110045G13Rik|Jedi-1|Megf12 platelet endothelial aggregation receptor 1 protein-coding common_peak1_76_789_-0.548987302291399_9.35121519191877_10.4915803968394 chr11 32558383 32559476 + 10.4915803968394 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 25663 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_54_564_-0.660816038916634_8.81169903784423_10.4905043895508 chr17 26939776 26940346 + 10.4905043895508 NA promoter-TSS (NR_104458) promoter-TSS (NR_104458) -523 NM_026307 67675 Mm.439919 NM_026307 ENSMUSG00000024194 Cuta 0610039D01Rik|1810022E02Rik|1810060C03Rik|2700094G22Rik|AI326454 cutA divalent cation tolerance homolog protein-coding common_peak2_94_466_0.58119105056555_9.15787426499244_10.4886549211997 chr11 5554750 5557105 + 10.4886549211997 NA Intergenic MMVL30-int|LTR|ERV1 -13710 NM_134033 104479 Mm.210403 NM_134033 ENSMUSG00000020482 Ccdc117 1110004K02Rik|1700026O03Rik|AU018638|AU042822|AV173073|BC018601 coiled-coil domain containing 117 protein-coding common_peak1_51_535_-0.684055634630484_8.72406137314253_10.4885037901924 chr7 135646953 135647438 + 10.4885037901924 NA intron (NM_001316679, intron 2 of 19) intron (NM_001316679, intron 2 of 19) -4704 NM_001316681 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_32_349_-0.873891164171449_8.0142655297466_10.4880445028806 chr15 66789418 66789846 + 10.4880445028806 NA intron (NM_001029841, intron 5 of 7) intron (NM_001029841, intron 5 of 7) 42197 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_131_1383_-0.404083657603135_10.2325863988352_10.4866731126823 chr10 98743588 98746318 + 10.4866731126823 NA Intergenic RMER10A|LTR|ERVL -170199 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_30_330_-0.904005202072911_7.91868480577076_10.4850707210436 chr11 82763422 82763986 + 10.4850707210436 NA promoter-TSS (NM_025884) promoter-TSS (NM_025884) 617 NM_009839 12467 Mm.4126 NM_009839 ENSMUSG00000020698 Cct6b CCT-zeta-2|CCTzeta-2|Cctz-2|TCP-1-zeta-2 chaperonin containing Tcp1, subunit 6b (zeta) protein-coding common_peak1_25_283_-0.994325874863749_7.65258418207281_10.4799335416396 chrX 170675321 170675801 + 10.4799335416396 NA intron (NM_001308488, intron 4 of 7) intron (NM_001308488, intron 4 of 7) 2917 NM_001199212 107626 Mm.486144 NM_001199212 ENSMUSG00000093806 Asmt Hiomt acetylserotonin O-methyltransferase protein-coding common_peak1_138_814_0.451328531674161_9.89632051495552_10.4788768040246 chr5 120812033 120813368 + 10.4788768040246 NA promoter-TSS (NM_033541) promoter-TSS (NM_033541) 62 NM_001083925 23961 Mm.233471 NM_001083925 ENSMUSG00000029605 Oas1b Flv|L1|Mmu-L1|Oas1|Oias-2|Oias2|Wnv 2'-5' oligoadenylate synthetase 1B protein-coding unique_peak2_9_133_-1.60156727401335_6.2653055534511_10.4762570961636 chr13 117220629 117221520 + 10.4762570961636 NA intron (NM_010330, intron 1 of 8) CpG 501 NM_010330 13723 Mm.274926 NM_010330 ENSMUSG00000021728 Emb AL022799|Gp70 embigin protein-coding common_peak2_304_2422_0.270046348473945_11.3776018636883_10.4743633505181 chr5 38559633 38562733 + 10.4743633505181 NA exon (NM_011715, exon 2 of 15) exon (NM_011715, exon 2 of 15) 412 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding common_peak1_27_301_-0.951839989307153_7.7624847446715_10.4659870992246 chr17 57032082 57032730 + 10.4659870992246 NA promoter-TSS (NM_010613) promoter-TSS (NM_010613) -899 NM_010613 16549 Mm.34296 NM_010613 ENSMUSG00000007670 Khsrp 6330409F21Rik|Fbp2|Fubp2|Ksrp KH-type splicing regulatory protein protein-coding common_peak1_96_481_0.572449027133448_9.19911384979669_10.4627131228946 chr5 137510074 137511247 + 10.4627131228946 NA Intergenic CpG -8220 NM_031408 57330 Mm.268344 NM_031408 ENSMUSG00000029714 Gigyf1 Perq1|mKIAA4110 GRB10 interacting GYF protein 1 protein-coding common_peak2_47_494_-0.71089693568852_8.59583624712271_10.4573141663493 chr9 108559679 108561193 + 10.4573141663493 NA promoter-TSS (NM_011830) promoter-TSS (NM_011830) -65 NM_011830 23918 Mm.6065 NM_011830 ENSMUSG00000062867 Impdh2 IMPD inosine 5'-phosphate dehydrogenase 2 protein-coding unique_peak2_41_436_-0.767402514515744_8.38778821224273_10.4556074220672 chr11 114806862 114808903 + 10.4556074220672 NA Intergenic Intergenic 8958 NM_181749 217302 Mm.269127 NM_181749 ENSMUSG00000034677 Gpr142 PGR2 G protein-coupled receptor 142 protein-coding common_peak2_121_675_0.490252325951145_9.64600559925776_10.4555259982795 chr10 75666506 75668461 + 10.4555259982795 NA intron (NM_172549, intron 29 of 36) CpG -23475 NM_027890 71733 Mm.247956 NM_027890 ENSMUSG00000006342 Susd2 1200011D11Rik sushi domain containing 2 protein-coding common_peak2_45_146_0.965400770443501_7.68237273005811_10.4553803043444 chr10 39448727 39449927 + 10.4553803043444 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 79528 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_217_2384_-0.301419004176882_11.0690640488044_10.4553012356309 chr11 70763384 70765224 + 10.4553012356309 NA promoter-TSS (NM_177565) promoter-TSS (NM_177565) -143 NM_177565 193043 Mm.40966 NM_177565 ENSMUSG00000043602 Zfp3 AI854635|B230309J24|Fnp-1|Zfp-3 zinc finger protein 3 protein-coding common_peak1_144_1529_-0.382547036189125_10.3880424194855_10.4546377214005 chr5 115132745 115135027 + 10.4546377214005 NA intron (NM_175352, intron 1 of 4) intron (NM_175352, intron 1 of 4) 1089 NM_175352 106840 Mm.29241 NM_175352 ENSMUSG00000046562 Unc119b AA407659|AI414892 unc-119 lipid binding chaperone B protein-coding common_peak1_284_3214_-0.257998715786814_11.5216036643219_10.4535562053149 chr8 125066516 125068697 + 10.4535562053149 NA intron (NM_174853, intron 1 of 11) intron (NM_174853, intron 1 of 11) 13411 NM_174854 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding common_peak2_59_228_0.796064955687116_8.2372362659405_10.4528824930185 chr4 121004373 121005691 + 10.4528824930185 NA intron (NM_133716, intron 1 of 9) MTD|LTR|ERVL-MaLR 12215 NM_133716 69780 Mm.271819 NM_133716 ENSMUSG00000032870 Smap2 1810031K02Rik|AA408614|Smap1l small ArfGAP 2 protein-coding common_peak1_23_263_-1.03061865126636_7.52908479372527_10.451084505335-2 chr6 50525907 50526394 + 10.451084505335 NA Intergenic MTE2a|LTR|ERVL-MaLR 40324 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding common_peak1_23_263_-1.03061865126636_7.52908479372527_10.451084505335 chr13 55017454 55017998 + 10.451084505335 NA intron (NM_001206392, intron 1 of 17) intron (NM_001206392, intron 1 of 17) 3093 NM_001206390 212032 Mm.267479 NM_001033245 ENSMUSG00000025877 Hk3 HK III|HK-III hexokinase 3 protein-coding common_peak1_89_925_-0.502077434509248_9.60382966600561_10.4509600536695 chr8 70233925 70235046 + 10.4509600536695 NA promoter-TSS (NM_133972) promoter-TSS (NM_133972) -63 NM_133972 76813 Mm.383251 NM_133972 ENSMUSG00000002343 Armc6 2410153K17Rik|AW554412 armadillo repeat containing 6 protein-coding common_peak1_318_2573_0.262248389419721_11.4609205329306_10.4509500586322 chr11 103697061 103698526 + 10.4509500586322 NA promoter-TSS (NR_102388) promoter-TSS (NR_102388) 69 NR_102396 399609 Mm.351922 NR_102388 C130046K22Rik - RIKEN cDNA C130046K22 gene ncRNA common_peak1_302_3442_-0.248467755811175_11.6252165876643_10.4494168076827 chr11 83646695 83650158 + 10.4494168076827 NA intron (NM_011337, intron 2 of 2) intron (NM_011337, intron 2 of 2) 952 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding unique_peak1_25_50_1.48299590266944_6.41392329330621_10.4488120946168-2 chr4 43287163 43287648 + 10.4488120946168 NA intron (NM_177195, intron 2 of 28) MTE2b|LTR|ERVL-MaLR 20246 NM_177195 320571 Mm.74465 NM_177195 ENSMUSG00000028457 Atp8b5 4930417M19Rik|Feta ATPase, class I, type 8B, member 5 protein-coding unique_peak1_25_50_1.48299590266944_6.41392329330621_10.4488120946168-3 chr8 128562898 128563500 + 10.4488120946168 NA Intergenic Intergenic -122455 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding unique_peak1_25_50_1.48299590266944_6.41392329330621_10.4488120946168 chr1 10225682 10226309 + 10.4488120946168 NA intron (NM_001102430, intron 1 of 37) Lx3_Mus|LINE|L1 6675 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak1_246_1820_0.308853911494886_10.9849421627243_10.4477188142218 chr13 49186804 49189009 + 10.4477188142218 NA intron (NM_013610, intron 1 of 3) CpG 359 NM_013610 18081 Mm.18503 NM_013610 ENSMUSG00000037966 Ninj1 AU024536 ninjurin 1 protein-coding common_peak2_66_685_-0.591521066023089_9.12630423316127_10.4469214803212 chr10 121372441 121376104 + 10.4469214803212 NA intron (NM_029364, intron 2 of 13) intron (NM_029364, intron 2 of 13) 9182 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding common_peak2_42_445_-0.755172729666354_8.42331353508713_10.4467577567823 chr7 80232024 80233583 + 10.4467577567823 NA promoter-TSS (NM_011870) promoter-TSS (NM_011870) 2 NM_001291276 23991 Mm.30217 NM_011870 ENSMUSG00000030538 Cib1 Cibkip|Kip|Prkdcip calcium and integrin binding 1 (calmyrin) protein-coding common_peak2_58_222_0.80462650512152_8.20321315248107_10.4450740573135 chr4 16167983 16169342 + 10.4450740573135 NA intron (NR_045765, intron 1 of 6) intron (NR_045765, intron 1 of 6) 4552 NR_045765 100415915 Mm.387180 NR_045765 ENSMUSG00000085112 A530072M11Rik - RIKEN cDNA gene A530072M11 ncRNA common_peak1_120_1260_-0.423785715692771_10.0884597024818_10.4441918794162 chr8 126589197 126590781 + 10.4441918794162 NA 3' UTR (NM_001164598, exon 2 of 2) 3' UTR (NM_001164598, exon 2 of 2) 3447 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_35_94_1.16144206472808_7.15057664069499_10.4426729207457 chr18 75488566 75489295 + 10.4426729207457 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -25715 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA common_peak1_35_94_1.16144206472808_7.15057664069499_10.4426729207457-2 chr6 39117823 39118705 + 10.4426729207457 NA promoter-TSS (NR_045813) promoter-TSS (NR_045813) 85 NM_172893 243771 Mm.268462 NM_172893 ENSMUSG00000038507 Parp12 9930021O16|AA409132|AA536654|ARTD12|PARP-12|Zc3hdc1 poly (ADP-ribose) polymerase family, member 12 protein-coding common_peak1_284_2211_0.281468636193788_11.2518699883316_10.4425936294453 chr11 61929310 61931231 + 10.4425936294453 NA promoter-TSS (NM_019921) promoter-TSS (NM_019921) -13 NM_019921 56697 Mm.274404 NM_019921 ENSMUSG00000047804 Akap10 1500031L16Rik|B130049N18Rik|D-AKAP-2|D-AKAP2|PRKA10 A kinase (PRKA) anchor protein 10 protein-coding common_peak2_330_2704_0.255979365947892_11.5294025616881_10.4389396579792 chr19 60789336 60791607 + 10.4389396579792 NA exon (NM_010123, exon 1 of 22) exon (NM_010123, exon 1 of 22) 222 NM_010123 13669 Mm.2238 NM_010123 ENSMUSG00000024991 Eif3a A830012B05Rik|Csma|Eif3|Eif3s10|mKIAA0139 eukaryotic translation initiation factor 3, subunit A protein-coding unique_peak2_6_106_-1.90812685875593_5.78740355702318_10.4369843206109-2 chr7 80840690 80841533 + 10.4369843206109 NA Intergenic MLTR14|LTR|ERV1 -20997 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding unique_peak2_6_106_-1.90812685875593_5.78740355702318_10.4369843206109 chr6 130286905 130287836 + 10.4369843206109 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -5442 NM_008459 16628 Mm.445916 NM_008459 ENSMUSG00000072718 Klra10 Ly49J|Ly49i2 killer cell lectin-like receptor subfamily A, member 10 protein-coding common_peak2_29_320_-0.917773054524599_7.86754295986_10.4339583537197 chr8 39005611 39006699 + 10.4339583537197 NA exon (NM_030254, exon 1 of 8) exon (NM_030254, exon 1 of 8) 288 NM_030254 80286 Mm.272722 NM_030254 ENSMUSG00000039530 Tusc3 AU022242|BC003311|N33 tumor suppressor candidate 3 protein-coding common_peak1_29_320_-0.917773054524599_7.86754295986_10.4339583537197 chr16 13671089 13671607 + 10.4339583537197 NA promoter-TSS (NM_025653) promoter-TSS (NM_025653) -510 NM_025976 67118 Mm.223689 NM_025653 ENSMUSG00000022684 Bfar 3010001A07Rik|3110001I22Rik|AI666707|AW107665|Bar|Rnf47 bifunctional apoptosis regulator protein-coding unique_peak2_26_291_-0.967616992040423_7.70601606285981_10.4326642222212 chr2 65194669 65196371 + 10.4326642222212 NA intron (NM_177025, intron 1 of 13) intron (NM_177025, intron 1 of 13) 43106 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak1_244_2713_-0.28122318162985_11.2655934146039_10.4323595664184 chr19 37434747 37436732 + 10.4323595664184 NA intron (NM_008245, intron 1 of 3) intron (NM_008245, intron 1 of 3) 898 NM_008245 15242 Mm.33896 NM_008245 ENSMUSG00000024986 Hhex Hex|Hex1|Hhex-rs2|Prh|Prhx hematopoietically expressed homeobox protein-coding common_peak1_72_747_-0.564575433502009_9.26460674313663_10.4295736840039 chr12 21173155 21174520 + 10.4295736840039 NA intron (NM_001135192, intron 2 of 28) intron (NM_001135192, intron 2 of 28) 62081 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding common_peak2_165_1768_-0.352600152335754_10.6124182565226_10.4284995927314 chr16 11201727 11204152 + 10.4284995927314 NA promoter-TSS (NR_038156) promoter-TSS (NR_038156) 353 NM_025546 66409 Mm.28291 NM_025546 ENSMUSG00000005846 Rsl1d1 2410005K20Rik|C76439|pBK1 ribosomal L1 domain containing 1 protein-coding common_peak2_31_339_-0.886525361826179_7.96612825522461_10.4275115749412 chrX 74253538 74254631 + 10.4275115749412 NA promoter-TSS (NM_007927) promoter-TSS (NM_007927) -603 NM_007927 13726 Mm.18892 NM_007927 ENSMUSG00000001964 Emd AW550900|Sta emerin protein-coding unique_peak2_31_339_-0.886525361826179_7.96612825522461_10.4275115749412 chr11 114964534 114965556 + 10.4275115749412 NA Intergenic Intergenic -4628 NM_199225 387565 Mm.351450 NM_199225 ENSMUSG00000058728 Cd300c Clm6 CD300C molecule protein-coding common_peak1_31_339_-0.886525361826179_7.96612825522461_10.4275115749412 chr10 122737103 122737859 + 10.4275115749412 NA intron (NM_176919, intron 1 of 8) intron (NM_176919, intron 1 of 8) 58166 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak2_185_2002_-0.330517673738761_10.8026878689433_10.4271431773132 chr9 64172100 64174314 + 10.4271431773132 NA promoter-TSS (NM_026507) promoter-TSS (NM_026507) -180 NM_024212 67891 Mm.280083 NM_024212 ENSMUSG00000032399 Rpl4 2010004J23Rik ribosomal protein L4 protein-coding common_peak1_63_654_-0.605873210926932_9.05241449096135_10.4250866913453 chr10 127324770 127325949 + 10.4250866913453 NA intron (NM_146011, intron 2 of 14) B2_Mm2|SINE|B2 1632 NM_146011 216445 Mm.227198 NM_146011 ENSMUSG00000040345 Arhgap9 AU043488 Rho GTPase activating protein 9 protein-coding common_peak1_38_109_1.0915837360832_7.32715158156626_10.4244342432407 chr15 5447408 5448117 + 10.4244342432407 NA Intergenic Lx10|LINE|L1 -48556 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak2_73_318_0.688983348632897_8.66190428808132_10.4222462328353 chr9 26998913 27000365 + 10.4222462328353 NA promoter-TSS (NM_144543) promoter-TSS (NM_144543) -38 NM_144543 77862 Mm.16925 NM_144543 ENSMUSG00000035443 Thyn1 D730042P09Rik|HSPC144|MDS012|MY105|Thy28 thymocyte nuclear protein 1 protein-coding common_peak1_129_1360_-0.406924519984742_10.2069890915116_10.4216664343639 chr13 97137204 97138593 + 10.4216664343639 NA promoter-TSS (NM_001146043) promoter-TSS (NM_001146043) 28 NM_021552 59050 Mm.390634 NM_021552 ENSMUSG00000060739 Nsa2 5730427N09Rik|LNR42|Nsa2p|Tinp1|Yr29 NSA2 ribosome biogenesis homolog protein-coding common_peak1_272_3061_-0.263779008626457_11.4483690631866_10.4204999751891 chr13 23584229 23586796 + 10.4204999751891 NA TTS (NM_001290530) TTS (NM_001290530) 458 NM_001290530 319179 Mm.440391 NM_178194 ENSMUSG00000047246 Hist1h2be - histone cluster 1, H2be protein-coding common_peak1_27_58_1.40392170065608_6.58460389968988_10.4191625409755 chr17 47513300 47513896 + 10.4191625409755 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 8547 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak2_209_1457_0.342417537536239_10.6809837730951_10.4178917506449 chr5 115533314 115536993 + 10.4178917506449 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) -24314 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak2_151_1608_-0.371747473767488_10.4660748738397_10.4166558010319 chr10 80825453 80827783 + 10.4166558010319 NA promoter-TSS (NM_008753) promoter-TSS (NM_008753) -38 NM_001301034 18245 Mm.398119 NM_008753 ENSMUSG00000035242 Oaz1 AZ-1|AZ1|Antizyme|ODC-Az|Oaz ornithine decarboxylase antizyme 1 protein-coding common_peak1_52_543_-0.671721075807227_8.75160230334673_10.4132945942524 chr8 95081117 95081793 + 10.4132945942524 NA intron (NM_028805, intron 1 of 19) CpG 254 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding common_peak1_43_455_-0.746479960284434_8.45965003402252_10.4122475251461-2 chr7 30409359 30410062 + 10.4122475251461 NA Intergenic Intergenic -4078 NM_011662 22177 Mm.46301 NM_011662 ENSMUSG00000030579 Tyrobp DAP12|KARAP|Ly83 TYRO protein tyrosine kinase binding protein protein-coding common_peak1_43_455_-0.746479960284434_8.45965003402252_10.4122475251461 chr1 21349423 21350194 + 10.4122475251461 NA 5' UTR (NM_183322, exon 1 of 3) 5' UTR (NM_183322, exon 1 of 3) 131 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak2_121_1271_-0.421751193051026_10.1020073587588_10.4107216077554 chr2 26963559 26965112 + 10.4107216077554 NA promoter-TSS (NM_207234) promoter-TSS (NM_207234) 51 NM_207234 227656 Mm.291874 NM_207234 ENSMUSG00000052406 Rexo4 Gm111|Rex4|Xpmc2h REX4, 3'-5' exonuclease protein-coding common_peak2_87_903_-0.507156597348525_9.56660066374092_10.4107214873725 chr13 98889914 98891546 + 10.4107214873725 NA exon (NM_001048267, exon 2 of 24) exon (NM_001048267, exon 2 of 24) 312 NM_001048267 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak1_238_1740_0.315404026441477_10.9234025008718_10.4099673836562 chr5 145139358 145141065 + 10.4099673836562 NA promoter-TSS (NM_001033313) promoter-TSS (NM_001033313) -122 NM_001033313 231887 Mm.188851 NM_001033313 ENSMUSG00000029623 Pdap1 HASPP28|PAP|PAP1 PDGFA associated protein 1 protein-coding common_peak1_53_553_-0.664922288023238_8.78128102203757_10.4068608419955 chr5 115488177 115488986 + 10.4068608419955 NA Intergenic B1_Mur3|SINE|Alu -4097 NM_133760 75387 Mm.332616 NM_133760 ENSMUSG00000029524 Sirt4 4930596O17Rik sirtuin 4 protein-coding common_peak2_183_1978_-0.332258159394932_10.78442681735_10.4058530175184 chr14 31335878 31338221 + 10.4058530175184 NA intron (NM_009796, intron 1 of 20) CpG 325 NM_009796 12339 Mm.201535 NM_009796 ENSMUSG00000021893 Capn7 AU022319|PalBH calpain 7 protein-coding common_peak1_24_46_1.53142634045875_6.32030202190701_10.403648388927 chr4 155218414 155218927 + 10.403648388927 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 3865 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_15_189_-1.27360234520578_6.93305443572806_10.4007652345836 chr10 53595899 53596232 + 10.4007652345836 NA promoter-TSS (NM_025541) promoter-TSS (NM_025541) -896 NM_025541 66403 Mm.272989 NM_025541 ENSMUSG00000019857 Asf1a 2310079C17Rik|C79052 anti-silencing function 1A histone chaperone protein-coding common_peak1_407_3575_0.223376689503207_11.9158193659349_10.3979701546579 chr5 105517755 105520568 + 10.3979701546579 NA promoter-TSS (NM_133897) promoter-TSS (NM_133897) -310 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak1_40_425_-0.773266355160412_8.34807644264563_10.3974095066027-2 chr5 120323107 120323648 + 10.3974095066027 NA Intergenic L2b|LINE|L2 -108509 NM_008499 16873 Mm.5151 NM_008499 ENSMUSG00000029595 Lhx5 Lim2 LIM homeobox protein 5 protein-coding common_peak1_40_425_-0.773266355160412_8.34807644264563_10.3974095066027 chr17 44107910 44108527 + 10.3974095066027 NA Intergenic Intergenic -2410 NM_199016 224794 Mm.255971 NM_199016 ENSMUSG00000023961 Enpp4 4933413N07Rik|AA986363|AI195364|E-NPP 4|Gm90|mKIAA0879 ectonucleotide pyrophosphatase/phosphodiesterase 4 protein-coding common_peak2_42_130_1.0123041687165_7.5395750858957_10.3974093815205 chr17 78400037 78401258 + 10.3974093815205 NA exon (NM_199448, exon 5 of 8) exon (NM_199448, exon 5 of 8) 17505 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_60_624_-0.623192928502476_8.97611591529821_10.3963376774104 chr9 106203154 106203892 + 10.3963376774104 NA intron (NM_011876, intron 1 of 8) intron (NM_011876, intron 1 of 8) 415 NM_011876 23999 Mm.274346 NM_011876 ENSMUSG00000023277 Twf2 A6-related|AU014993|Ptk9l|Ptk9r twinfilin actin binding protein 2 protein-coding common_peak1_22_254_-1.05589263276535_7.46640712047618_10.3947420619111 chr9 114025179 114025714 + 10.3947420619111 NA intron (NM_178624, intron 1 of 14) intron (NM_178624, intron 1 of 14) 1305 NM_178624 72179 Mm.386808 NM_178624 ENSMUSG00000032507 Fbxl2 2810423A21Rik|Fbl3 F-box and leucine-rich repeat protein 2 protein-coding common_peak2_128_1348_-0.407812946541036_10.1937681596778_10.3936954484603 chr19 46711926 46717235 + 10.3936954484603 NA intron (NM_020577, intron 6 of 10) intron (NM_020577, intron 6 of 10) 7137 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak2_188_2036_-0.326486588860822_10.8289869705355_10.3932932096393 chr9 124036833 124041976 + 10.3932932096393 NA Intergenic Intergenic 17433 NM_009914 12771 Mm.57050 NM_009914 ENSMUSG00000035448 Ccr3 CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3 chemokine (C-C motif) receptor 3 protein-coding common_peak2_151_927_0.422220141828385_10.0690910660418_10.3881405759419 chr17 46247375 46249078 + 10.3881405759419 NA promoter-TSS (NM_009085) promoter-TSS (NM_009085) 146 NM_145353 28064 Mm.248769 NM_145353 ENSMUSG00000071074 Yipf3 C6orf109|D17Wsu94e|KLIP1 Yip1 domain family, member 3 protein-coding common_peak2_135_1426_-0.395396424942522_10.2810714070045_10.387962801605 chr4 115827215 115829225 + 10.387962801605 NA 5' UTR (NM_175308, exon 1 of 4) 5' UTR (NM_175308, exon 1 of 4) 128 NM_175308 100465 Mm.35571 NM_175308 ENSMUSG00000028709 Mob3c AW822253|D130076I06Rik|Mobkl2c MOB kinase activator 3C protein-coding common_peak1_48_163_0.919324232292601_7.81721412076438_10.387602982212 chr9 123940388 123941100 + 10.387602982212 NA Intergenic RMER20B|LTR|ERVK 27948 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding unique_peak2_48_163_0.919324232292601_7.81721412076438_10.387602982212 chr13 93921816 93922960 + 10.387602982212 NA intron (NM_009712, intron 6 of 7) intron (NM_009712, intron 6 of 7) 131611 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak1_58_604_-0.635264927120131_8.92315886860189_10.38428726223 chr14 54138347 54139064 + 10.38428726223 NA Intergenic Intergenic 115224 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_140_1482_-0.387037278875328_10.340784243017_10.3834133893009 chr5 31047375 31049633 + 10.3834133893009 NA promoter-TSS (NM_001177621) promoter-TSS (NM_001177621) 58 NM_001177621 330064 Mm.205463 NM_177870 ENSMUSG00000006641 Slc5a6 E430023I20 solute carrier family 5 (sodium-dependent vitamin transporter), member 6 protein-coding common_peak1_655_6665_0.165286907700601_12.7852490559605_10.382241199031 chr8 13672759 13677719 + 10.382241199031 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 2348 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_37_396_-0.806018682559711_8.2299858558631_10.3818274350034 chr7 98703181 98703907 + 10.3818274350034 NA intron (NM_028410, intron 1 of 4) CpG 181 NM_028410 72981 Mm.4428 NM_028410 ENSMUSG00000030753 Thap12 2900052B10Rik|Dap4|Prkrir|Rpkrir THAP domain containing 12 protein-coding common_peak2_37_396_-0.806018682559711_8.2299858558631_10.3818274350034 chr15 97849025 97850141 + 10.3818274350034 NA Intergenic Intergenic -5081 NM_001204278 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_197_2143_-0.318022415457252_10.9070779827291_10.3791969058059 chr7 38213005 38216500 + 10.3791969058059 NA Intergenic Intergenic 13242 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding common_peak1_23_42_1.58751071339_6.2200201113971_10.3773672024614 chr13 92243167 92243665 + 10.3773672024614 NA intron (NM_010829, intron 19 of 23) intron (NM_010829, intron 19 of 23) -111367 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding unique_peak1_23_42_1.58751071339_6.2200201113971_10.3773672024614-2 chr5 135524796 135525384 + 10.3773672024614 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 20032 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding unique_peak1_23_42_1.58751071339_6.2200201113971_10.3773672024614 chr14 25496026 25496490 + 10.3773672024614 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 37073 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_23_42_1.58751071339_6.2200201113971_10.3773672024614-3 chr6 119219812 119220477 + 10.3773672024614 NA 3' UTR (NM_001033379, exon 9 of 9) 3' UTR (NM_001033379, exon 9 of 9) -16382 NM_001033382 319734 Mm.440773 NM_001033382 ENSMUSG00000041460 Cacna2d4 5730412N02Rik|BE686333 calcium channel, voltage-dependent, alpha 2/delta subunit 4 protein-coding common_peak2_73_756_-0.557753527587966_9.28527272619175_10.3759194373387 chr9 3403140 3404661 + 10.3759194373387 NA promoter-TSS (NM_027545) promoter-TSS (NM_027545) -185 NM_027545 244672 Mm.245482 NM_027545 ENSMUSG00000025898 Cwf19l2 3230401L03Rik|9030209E10 CWF19-like 2, cell cycle control (S. pombe) protein-coding common_peak1_121_676_0.488119738658332_9.64707189290416_10.3751943406606 chr12 28635195 28636415 + 10.3751943406606 NA intron (NM_011300, intron 1 of 6) CpG-3104 148 NM_011300 20115 Mm.279839 NM_011300 ENSMUSG00000061477 Rps7 Mtu|Rps7A|S7 ribosomal protein S7 protein-coding common_peak2_119_660_0.493374593462724_9.61519375823906_10.3736477306107 chr1 75210180 75211625 + 10.3736477306107 NA promoter-TSS (NM_029010) promoter-TSS (NM_029010) 73 NM_011494 20872 Mm.1155 NM_011494 ENSMUSG00000026201 Stk16 EDPK|Krct|MPSK|PKL12|TSF-1 serine/threonine kinase 16 protein-coding common_peak1_212_2322_-0.304479376808507_11.0295337504046_10.3673741735188 chr11 87743386 87745101 + 10.3673741735188 NA TTS (NM_009296) TTS (NM_009296) 6678 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding common_peak1_35_376_-0.82712304020964_8.14485919316384_10.3666319230111 chr17 88701257 88701956 + 10.3666319230111 NA intron (NM_023630, intron 6 of 8) intron (NM_023630, intron 6 of 8) 32946 NM_023630 71828 Mm.61330 NM_023630 ENSMUSG00000024154 Gtf2a1l 1700011N16Rik|Alf|Gtf2a1lf general transcription factor IIA, 1-like protein-coding common_peak2_64_260_0.749008523763012_8.40241025845139_10.3664459772598 chr8 95488080 95489365 + 10.3664459772598 NA promoter-TSS (NM_009974) promoter-TSS (NM_009974) 98 NM_009974 13000 Mm.51136 NM_009974 ENSMUSG00000046707 Csnk2a2 1110035J23Rik|C77789|CK2 casein kinase 2, alpha prime polypeptide protein-coding unique_peak1_10_4_3.31125733662023_3.97755676319748_10.3641269131915 chr17 6466205 6466523 + 10.3641269131915 NA Intergenic Intergenic -15370 NR_033520 547127 Mm.297552 NM_001045538 Tmem181b-ps Tmem181b transmembrane protein 181B, pseudogene pseudo common_peak2_152_936_0.419900055621554_10.08185526547_10.3634141831412 chr6 137734346 137736009 + 10.3634141831412 NA promoter-TSS (NM_011499) promoter-TSS (NM_011499) 95 NM_011499 20901 Mm.22584 NM_011499 ENSMUSG00000030224 Strap AW557906|C78091|C79202|Unrip serine/threonine kinase receptor associated protein protein-coding common_peak1_20_235_-1.10516840556334_7.33005884658017_10.3629337007206 chr10 128524105 128524535 + 10.3629337007206 NA intron (NM_011843, intron 1 of 30) intron (NM_011843, intron 1 of 30) 1539 NM_011843 23943 Mm.66056 NM_011843 ENSMUSG00000025366 Esyt1 Fam62a|Mbc2|vp115 extended synaptotagmin-like protein 1 protein-coding common_peak2_38_405_-0.792392467577316_8.26913968339652_10.3599438976444 chr7 106255863 106257101 + 10.3599438976444 NA Intergenic L1Md_T|LINE|L1 -41142 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak1_146_1550_-0.377972217972122_10.40999686205_10.3586467495855 chr16 17530153 17531660 + 10.3586467495855 NA intron (NM_026909, intron 1 of 4) CpG-5555 146 NM_026909 69009 Mm.10174 NM_026909 ENSMUSG00000022760 Thap7 1810004B07Rik THAP domain containing 7 protein-coding common_peak1_25_282_-0.98923699819095_7.65003974373641_10.3567847850372 chr6 129581766 129582333 + 10.3567847850372 NA exon (NM_153590, exon 3 of 7) exon (NM_153590, exon 3 of 7) 3763 NM_153590 243655 Mm.30968 NM_153590 ENSMUSG00000050241 Klre1 Klre-1|NKG2I killer cell lectin-like receptor family E member 1 protein-coding common_peak1_210_1467_0.34096308629575_10.6901177959911_10.3567716855989 chr14 57664245 57665873 + 10.3567716855989 NA promoter-TSS (NM_020506) promoter-TSS (NM_020506) -103 NM_020506 57258 Mm.202747 NM_020506 ENSMUSG00000021952 Xpo4 B430309A01Rik|mKIAA1721 exportin 4 protein-coding common_peak1_137_808_0.449211739003173_9.88460176193156_10.3543707578568 chr10 88388401 88390739 + 10.3543707578568 NA intron (NM_001004164, intron 1 of 20) intron (NM_001004164, intron 1 of 20) 10158 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak2_106_1105_-0.452165250878934_9.88505304479524_10.3543707578564 chr14 120519273 120522227 + 10.3543707578564 NA Intergenic Intergenic 42289 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding common_peak1_13_170_-1.35790007605433_6.73890247685873_10.3531093788949 chr13 55571139 55571508 + 10.3531093788949 NA promoter-TSS (NM_145382) promoter-TSS (NM_145382) -203 NM_145382 212483 Mm.35661 NM_145382 ENSMUSG00000021495 Fam193b IRIZIO|Kiaa1931 family with sequence similarity 193, member B protein-coding common_peak2_273_2098_0.287463416429063_11.1792181595067_10.3500624445372 chr17 71474078 71476585 + 10.3500624445372 NA promoter-TSS (NM_028887) promoter-TSS (NM_028887) 12 NM_028887 74355 Mm.194450 NM_028887 ENSMUSG00000024054 Smchd1 4931400A14Rik|AW554188|MommeD1|mKIAA0650 SMC hinge domain containing 1 protein-coding common_peak1_70_299_0.704340855351136_8.58098911817145_10.3477246175664 chr15 80006230 80007350 + 10.3477246175664 NA intron (NM_011057, intron 1 of 6) intron (NM_011057, intron 1 of 6) -7764 NR_106072 102465699 NR_106072 ENSMUSG00000099222 Mir7213 Gm27377|mmu-mir-7213 microRNA 7213 ncRNA common_peak1_221_1574_0.329394365276411_10.7858332959128_10.347501022941 chr10 128058322 128060302 + 10.347501022941 NA intron (NM_019766, intron 1 of 7) CpG 330 NM_019766 56351 Mm.305816 NM_019766 ENSMUSG00000071072 Ptges3 5730442A20Rik|Ptges|Tebp|cPGES|p23|sid3177 prostaglandin E synthase 3 (cytosolic) protein-coding common_peak2_221_1574_0.329394365276411_10.7858332959128_10.347501022941 chr5 143908640 143910833 + 10.347501022941 NA promoter-TSS (NM_008886) promoter-TSS (NM_008886) 103 NM_001172146 231872 Mm.200499 NM_146165 ENSMUSG00000029610 Aimp2 AA407136|AA407225|Aimp2(p38)|Jtv1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 protein-coding common_peak1_484_4493_0.199659541061822_12.2336141797108_10.3459625984953 chr12 69370803 69374468 + 10.3459625984953 NA 5' UTR (NM_007481, exon 2 of 2) 5' UTR (NM_007481, exon 2 of 2) 485 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak1_177_1906_-0.337458448362211_10.7283599041317_10.3455004817837 chr2 129197890 129199300 + 10.3455004817837 NA promoter-TSS (NM_015747) promoter-TSS (NM_015747) -178 NM_015747 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak1_103_535_0.542556676555872_9.33736752873571_10.3454848392269 chr2 25128106 25129972 + 10.3454848392269 NA Intergenic Intergenic -33834 NM_172204 241275 Mm.218774 NM_172204 ENSMUSG00000036805 Noxa1 NY-CO-31|SDCCAG31 NADPH oxidase activator 1 protein-coding common_peak1_31_76_1.25607903361662_6.89482605750321_10.3440708429813 chr9 37613734 37614149 + 10.3440708429813 NA promoter-TSS (NM_011449) promoter-TSS (NM_011449) 94 NM_011734 22619 Mm.196345 NM_011734 ENSMUSG00000001942 Siae LSE|Ysg2 sialic acid acetylesterase protein-coding common_peak2_96_998_-0.479002504429008_9.72483961557791_10.3440140683779 chr8 72159308 72161054 + 10.3440140683779 NA Intergenic B2_Mm2|SINE|B2 -1019 NM_023126 17274 Mm.162811 NM_023126 ENSMUSG00000003037 Rab8a AA409338|Mel RAB8A, member RAS oncogene family protein-coding unique_peak1_26_54_1.44084785331493_6.50178364018213_10.3424404429391 chr14 53743002 53743649 + 10.3424404429391 NA Intergenic Intergenic 510604 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak1_26_54_1.44084785331493_6.50178364018213_10.3424404429391-3 chr9 110329548 110330055 + 10.3424404429391 NA Intergenic (CAGGC)n|Simple_repeat|Simple_repeat -3487 NM_001103162 235623 Mm.288741 NM_001001144 ENSMUSG00000032485 Scap 9530044G19|mKIAA0199 SREBF chaperone protein-coding unique_peak1_26_54_1.44084785331493_6.50178364018213_10.3424404429391-2 chr2 32063643 32064251 + 10.3424404429391 NA Intergenic Intergenic 13001 NR_106135 102466844 NR_106135 ENSMUSG00000099075 Mir7674 Gm27563|mmu-mir-7674 microRNA 7674 ncRNA common_peak1_93_966_-0.487628680864466_9.67355773904461_10.3365690059753 chr5 107986218 107987274 + 10.3365690059753 NA intron (NM_026062, intron 1 of 4) CpG 331 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_43_136_0.988377970919781_7.59222106842042_10.335955121549 chr6 54854804 54855571 + 10.335955121549 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 38271 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_90_934_-0.496477512054952_9.62058379874752_10.3354337291563 chr9 110304459 110305829 + 10.3354337291563 NA promoter-TSS (NM_001081381) promoter-TSS (NM_001081381) -48 NM_001081381 72341 Mm.374250 NM_001081381 ENSMUSG00000054836 Elp6 2610001P13Rik|2610002I17Rik|AV159994|Tmem103 elongator acetyltransferase complex subunit 6 protein-coding common_peak2_138_816_0.447792512646918_9.89808852446914_10.3325873785042 chr2 166233547 166236272 + 10.3325873785042 NA Intergenic Intergenic -38999 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 OTTMUSG00000001131 predicted gene 11468 ncRNA common_peak1_54_198_0.844666397842267_8.05895781946478_10.3323327799244 chr5 24100576 24101556 + 10.3323327799244 NA intron (NM_026448, intron 1 of 10) CpG 476 NM_026448 52323 Mm.273768 NM_026448 ENSMUSG00000028986 Klhl7 2700038B03Rik|D5Ertd363e|SBBI26 kelch-like 7 protein-coding common_peak1_738_7780_0.152980990353186_13.0022303595142_10.331706093446 chr11 97111654 97120278 + 10.331706093446 NA promoter-TSS (NM_019507) promoter-TSS (NM_019507) -635 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding common_peak2_98_1019_-0.472898973044694_9.75790395033651_10.3304309610604 chr3 135665175 135668450 + 10.3304309610604 NA intron (NM_008689, intron 3 of 24) intron (NM_008689, intron 3 of 24) 24735 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_39_115_1.05976554368956_7.38786376697235_10.3297555035821 chr16 49876324 49877490 + 10.3297555035821 NA intron (NM_010581, intron 3 of 9) MLTR11A|LTR|ERVK 21253 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_126_1325_-0.410654365938543_10.1675378771433_10.3297144734369 chr5 96208229 96210819 + 10.3297144734369 NA promoter-TSS (NM_001039084) promoter-TSS (NM_001039084) -591 NM_001039084 94061 Mm.295499 NM_053158 ENSMUSG00000029486 Mrpl1 2410002L03Rik|5830418D04Rik|AI462572|L1mt mitochondrial ribosomal protein L1 protein-coding common_peak2_182_1964_-0.331659629945712_10.7744837821731_10.3276672101116 chr19 6240740 6243327 + 10.3276672101116 NA intron (NM_194348, intron 1 of 39) intron (NM_194348, intron 1 of 39) 365 NM_194348 329015 Mm.277384 NM_194348 ENSMUSG00000024773 Atg2a 1810013C15Rik|A830054M12|BC023754|mKIAA0404 autophagy related 2A protein-coding unique_peak2_2_66_-2.73215065592474_4.7000138624954_10.3273763985497 chr3 85573519 85573999 + 10.3273763985497 NA promoter-TSS (NM_144896) promoter-TSS (NM_144896) -370 NM_144896 229487 Mm.52275 NM_144896 ENSMUSG00000028085 Gatb 9430026F02Rik|Pet112|Pet112l glutamyl-tRNA(Gln) amidotransferase, subunit B protein-coding unique_peak1_14_13_2.37468919935374_4.99469952173448_10.3265751846017-3 chr9 58657098 58657495 + 10.3265751846017 NA intron (NM_028598, intron 5 of 5) intron (NM_028598, intron 5 of 5) 75056 NM_009145 20320 Mm.15125 NM_009145 ENSMUSG00000032336 Nptn AW554172|SDR-1|Sdfr1 neuroplastin protein-coding unique_peak1_14_13_2.37468919935374_4.99469952173448_10.3265751846017-2 chr8 122343214 122343509 + 10.3265751846017 NA Intergenic Intergenic 17385 NM_133202 170732 Mm.154808 NM_133202 ENSMUSG00000039079 Trhr2 TRH-R2 thyrotropin releasing hormone receptor 2 protein-coding common_peak1_14_13_2.37468919935374_4.99469952173448_10.3265751846017 chr13 55106068 55106466 + 10.3265751846017 NA intron (NM_012017, intron 1 of 6) intron (NM_012017, intron 1 of 6) 958 NM_012017 26919 Mm.22795 NM_012017 ENSMUSG00000021481 Zfp346 Jaz|Znf346 zinc finger protein 346 protein-coding unique_peak1_14_13_2.37468919935374_4.99469952173448_10.3265751846017 chr11 95805503 95805905 + 10.3265751846017 NA Intergenic Intergenic -18796 NM_153104 237928 Mm.133075 NM_153104 ENSMUSG00000050860 Phospho1 D11Moh36|Phospo1 phosphatase, orphan 1 protein-coding common_peak2_535_5123_0.187325873367145_12.4167176970252_10.3265531518732 chr6 130154082 130168247 + 10.3265531518732 NA promoter-TSS (NR_104105) promoter-TSS (NR_104105) -416 NR_104105 654449 Mm.439698 NM_008461 ENSMUSG00000072721 Klra14-ps EG654449|Gm15858|Klra14|Klra29|Klra31|Ly49N|OTTMUSG00000026959 killer cell lectin-like receptor subfamily A, member 14, pseudogene pseudo common_peak1_83_860_-0.519170161225633_9.49028434678403_10.3241139238471 chr2 34799261 34800349 + 10.3241139238471 NA 5' UTR (NM_145522, exon 1 of 8) 5' UTR (NM_145522, exon 1 of 8) 107 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding common_peak1_23_262_-1.02514352120021_7.5263472286922_10.323657112873 chr16 84582595 84583126 + 10.323657112873 NA Intergenic B3|SINE|B2 -96929 NR_040537 78023 Mm.243853 NR_040537 4930529L06Rik - RIKEN cDNA 4930529L06 gene ncRNA common_peak2_61_633_-0.615044514218745_9.00081677303004_10.3219494031424 chr6 140230422 140233108 + 10.3219494031424 NA Intergenic B4A|SINE|B4 190240 NM_007605 12344 Mm.12817 NM_007605 ENSMUSG00000041791 Capza3 510-4|Cappa3|Gsg3|Tex8|repro32 capping protein (actin filament) muscle Z-line, alpha 3 protein-coding common_peak2_86_891_-0.508102069254452_9.54684886529308_10.3217965840397 chr6 47780415 47782577 + 10.3217965840397 NA Intergenic Intergenic 22156 NR_030485 735289 NR_030485 ENSMUSG00000076060 Mir704 Mirn704|mir-704|mmu-mir-704 microRNA 704 ncRNA unique_peak1_12_8_2.75888393201226_4.54936696744844_10.3213522672004 chr5 134130740 134131043 + 10.3213522672004 NA intron (NM_030719, intron 2 of 8) intron (NM_030719, intron 2 of 8) 31143 NM_030719 80909 Mm.45218 NM_030719 ENSMUSG00000015944 Gatsl2 7530428J21Rik|AW742413|Gats|Gatsl1 GATS protein-like 2 protein-coding unique_peak1_12_8_2.75888393201226_4.54936696744844_10.3213522672004-2 chr8 46713844 46714141 + 10.3213522672004 NA Intergenic Intergenic 25523 NR_045750 100503498 Mm.187358 NR_045750 ENSMUSG00000097534 Gm16675 - predicted gene, 16675 ncRNA common_peak2_109_581_0.523027986663989_9.44638933624028_10.3202369086735 chr16 64835554 64837662 + 10.3202369086735 NA Intergenic (TTTG)n|Simple_repeat|Simple_repeat -15477 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak1_294_3337_-0.251136247442453_11.5792001156414_10.3197469954426 chr11 69366884 69369635 + 10.3197469954426 NA intron (NM_146019, intron 1 of 39) intron (NM_146019, intron 1 of 39) 1167 NM_146019 216848 Mm.178246 NM_146019 ENSMUSG00000018474 Chd3 2600010P09Rik|AF020312|Chd7|Prp7|Prp9-1 chromodomain helicase DNA binding protein 3 protein-coding common_peak2_270_2067_0.289447063032473_11.1587440018312_10.3196295899421 chr11 72794926 72797168 + 10.3196295899421 NA promoter-TSS (NM_001045536) promoter-TSS (NM_001045536) -179 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding common_peak2_129_742_0.466308430980657_9.77037261602892_10.3150991993891 chr4 130662620 130664815 + 10.3150991993891 NA intron (NM_001159605, intron 1 of 19) CpG 358 NM_001159605 80912 Mm.440206 NM_030722 ENSMUSG00000028580 Pum1 AA517475|Pumm|mKIAA0099 pumilio RNA-binding family member 1 protein-coding common_peak1_31_338_-0.88227588882482_7.96400351872393_10.3150092926833 chr6 31209110 31209857 + 10.3150092926833 NA intron (NR_110469, intron 1 of 3) intron (NR_110469, intron 1 of 3) 8991 NR_110470 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak1_54_562_-0.655700093694314_8.80914106523307_10.3150035488918 chr12 81484471 81485280 + 10.3150035488918 NA promoter-TSS (NR_132135) promoter-TSS (NR_132135) -24 NR_132134 66272 Mm.439970 NM_025461 ENSMUSG00000091803 Cox16 1810020G14Rik|1810055I05Rik|BB388670 cytochrome c oxidase assembly protein 16 protein-coding common_peak2_141_842_0.440383036091291_9.93958033898773_10.3119755053556 chr2 154891820 154893396 + 10.3119755053556 NA intron (NM_026030, intron 1 of 8) CpG 298 NM_026030 67204 Mm.377134 NM_026030 ENSMUSG00000074656 Eif2s2 2810026E11Rik|38kDa|AA408636|AA571381|AA986487|AW822225|D2Ertd303e|EIF2|EIF2B eukaryotic translation initiation factor 2, subunit 2 (beta) protein-coding common_peak1_192_1298_0.359619576998378_10.5229955039471_10.2989341900452 chr4 44755574 44757325 + 10.2989341900452 NA promoter-TSS (NM_138590) promoter-TSS (NM_138590) -110 NM_138590 319885 Mm.331576 NM_138590 ENSMUSG00000035649 Zcchc7 4930572I07Rik|D4Wsu132e zinc finger, CCHC domain containing 7 protein-coding common_peak2_495_4629_0.19633497133213_12.2749639638137_10.2977890459401 chr17 35915757 35921141 + 10.2977890459401 NA TTS (NR_035445) TTS (NR_035445) 560 NR_035445 100316810 NR_035445 ENSMUSG00000084751 Mir1894 Mirn1894|mmu-mir-1894 microRNA 1894 ncRNA common_peak2_40_424_-0.769875765959639_8.34638114804524_10.296839476944 chr2 26408395 26409448 + 10.296839476944 NA TTS (NM_153125) TTS (NM_153125) 206 NM_001290437 64436 Mm.330070 NM_033134 ENSMUSG00000026925 Inpp5e 1200002L24Rik|72kDa|mKIAA0123 inositol polyphosphate-5-phosphatase E protein-coding common_peak1_94_976_-0.483744961693173_9.6903422711218_10.2940315722077 chr1 128614648 128615947 + 10.2940315722077 NA Intergenic Intergenic -22998 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak2_106_558_0.532265946512583_9.39283744609948_10.2926112797252 chr5 137509683 137511647 + 10.2926112797252 NA Intergenic CpG -8215 NM_031408 57330 Mm.268344 NM_031408 ENSMUSG00000029714 Gigyf1 Perq1|mKIAA4110 GRB10 interacting GYF protein 1 protein-coding common_peak2_117_1225_-0.4276045474626_10.0459409899595_10.2918680786658 chr10 123195760 123197706 + 10.2918680786658 NA intron (NM_001301628, intron 1 of 20) CpG 286 NM_027604 14479 Mm.244209 NM_027604 ENSMUSG00000020124 Usp15 4921514G19Rik|AI327321|E430033I05Rik|Gcap18 ubiquitin specific peptidase 15 protein-coding common_peak1_132_1391_-0.399043183186368_10.2434219042555_10.2912418174053 chr2 117446095 117448199 + 10.2912418174053 NA Intergenic Intergenic -104270 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_14_179_-1.30980897491833_6.83694860887051_10.2909139602323 chr14 78909122 78909621 + 10.2909139602323 NA intron (NM_173758, intron 3 of 25) intron (NM_173758, intron 3 of 25) 60193 NM_173758 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding common_peak1_430_3847_0.214662619378206_12.0172243934591_10.2878348023831 chr15 81856742 81860230 + 10.2878348023831 NA promoter-TSS (NM_020507) promoter-TSS (NM_020507) -160 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding common_peak1_45_473_-0.723670133618393_8.52690818208906_10.2869204985286 chr12 80129810 80130785 + 10.2869204985286 NA intron (NR_033514, intron 2 of 2) intron (NR_033514, intron 2 of 2) 2547 NR_033514 69548 Mm.269712 NR_033514 ENSMUSG00000097729 2310015A10Rik 5330419I17Rik RIKEN cDNA 2310015A10 gene ncRNA common_peak2_67_280_0.722334563125957_8.49559360178391_10.2856744768183 chr2 118302777 118304387 + 10.2856744768183 NA intron (NM_201367, intron 1 of 2) intron (NM_201367, intron 1 of 2) -1332 NR_045919 73358 Mm.437192 NR_045919 ENSMUSG00000085889 1700054M17Rik - RIKEN cDNA 1700054M17 gene ncRNA common_peak1_45_147_0.955619749650915_7.68726324045441_10.2852580760399 chr6 118561782 118562771 + 10.2852580760399 NA promoter-TSS (NM_001081112) promoter-TSS (NM_001081112) -20 NM_001081112 232339 Mm.276116 NM_001081112 ENSMUSG00000007827 Ankrd26 5730521P14Rik|BC008111|mKIAA1074 ankyrin repeat domain 26 protein-coding common_peak2_45_147_0.955619749650915_7.68726324045441_10.2852580760399 chr4 119807468 119808459 + 10.2852580760399 NA Intergenic Intergenic -6715 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak2_295_3348_-0.249894075936238_11.5845676227386_10.2838997137245 chr8 125066109 125069104 + 10.2838997137245 NA intron (NM_174853, intron 1 of 11) intron (NM_174853, intron 1 of 11) 13411 NM_174854 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding common_peak2_101_1050_-0.463263865648365_9.805915021138_10.2831879894892 chr17 13007169 13009264 + 10.2831879894892 NA exon (NM_013671, exon 2 of 5) exon (NM_013671, exon 2 of 5) 377 NM_013671 20656 Mm.290876 NM_013671 ENSMUSG00000006818 Sod2 MnSOD|Sod-2 superoxide dismutase 2, mitochondrial protein-coding unique_peak2_12_160_-1.40210794466004_6.6298629057846_10.2822837135991 chrX 75733402 75734326 + 10.2822837135991 NA intron (NR_029443, intron 7 of 8) intron (NR_029443, intron 7 of 8) 30835 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA common_peak2_258_1945_0.297023765695769_11.074807877629_10.280400672048 chr5 73234333 73239308 + 10.280400672048 NA intron (NM_028194, intron 1 of 62) MLT1H1|LTR|ERVL-MaLR 19798 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding unique_peak2_10_142_-1.52668590527079_6.39652838414299_10.2783983712618 chr7 113206565 113207320 + 10.2783983712618 NA promoter-TSS (NM_007489) promoter-TSS (NM_007489) -523 NM_001243048 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak1_112_605_0.512345514699449_9.49934674082268_10.2689507766732 chr18 37998036 37999529 + 10.2689507766732 NA 5' UTR (NM_001205336, exon 1 of 33) 5' UTR (NM_001205336, exon 1 of 33) 187 NM_001205336 106952 Mm.247642 NM_139206 ENSMUSG00000024451 Arap3 Centd3|Drag1|E030006K04Rik|cnt-d3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding common_peak2_120_1257_-0.42034936224384_10.0867415257574_10.2679218500348 chr15 82165458 82167226 + 10.2679218500348 NA intron (NM_033218, intron 1 of 18) intron (NM_033218, intron 1 of 18) 19073 NM_033218 20788 Mm.9002 NM_033218 ENSMUSG00000022463 Srebf2 AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc sterol regulatory element binding factor 2 protein-coding common_peak2_37_105_1.09905606002005_7.27744848457322_10.2678907515482 chr15 77894796 77895482 + 10.2678907515482 NA Intergenic Intergenic 33855 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak1_37_105_1.09905606002005_7.27744848457322_10.2678907515482 chr2 124719392 124720171 + 10.2678907515482 NA Intergenic (A)n|Simple_repeat|Simple_repeat 66200 NM_199239 214968 Mm.330536 NM_172537 ENSMUSG00000027200 Sema6d 1110067B02Rik|AA409156|D330011G23|mKIAA1479 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D protein-coding common_peak1_46_483_-0.715732149848577_8.56099716235031_10.2641990308018 chr14 20388471 20389436 + 10.2641990308018 NA promoter-TSS (NM_134081) promoter-TSS (NM_134081) -43 NM_134081 108671 Mm.2871 NM_134081 ENSMUSG00000021811 Dnajc9 5330419I01Rik|AU020082 DnaJ heat shock protein family (Hsp40) member C9 protein-coding common_peak2_143_1514_-0.380579782928578_10.374812186896_10.2624888412261 chr7 6282391 6284245 + 10.2624888412261 NA Intergenic B2_Mm2|SINE|B2 -3262 NM_001024928 384763 Mm.276279 NM_001024928 ENSMUSG00000054893 Zfp667 A830025F02Rik|Mip1|ZNF667 zinc finger protein 667 protein-coding common_peak1_71_306_0.695815138875201_8.61000241480778_10.2614153588898 chr11 49100594 49101822 + 10.2614153588898 NA intron (NM_010999, intron 2 of 5) RMER17C-int|LTR|ERVK 12549 NM_146337 258334 Mm.390388 NM_146337 ENSMUSG00000047511 Olfr1396 MOR276-2 olfactory receptor 1396 protein-coding common_peak2_287_2246_0.277350197438183_11.272459507899_10.2594638146939 chr9 89196857 89202122 + 10.2594638146939 NA exon (NM_007534, exon 1 of 2) exon (NM_007534, exon 1 of 2) 216 NM_007534 12045 Mm.479217 NM_007534 ENSMUSG00000089929 Bcl2a1b A1-b B cell leukemia/lymphoma 2 related protein A1b protein-coding common_peak1_19_224_-1.12264696358626_7.25245770942391_10.2585137093575 chr7 101108025 101108559 + 10.2585137093575 NA promoter-TSS (NM_001146010) promoter-TSS (NM_001146010) -483 NM_001146010 207278 Mm.263041 NM_199012 ENSMUSG00000030691 Fchsd2 BC034086|R74866|Sh3md3|mKIAA0769 FCH and double SH3 domains 2 protein-coding common_peak1_76_340_0.663093611748893_8.74517473489862_10.2581367865891 chr9 14093092 14094209 + 10.2581367865891 NA Intergenic Intergenic -182651 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_38_404_-0.788834648164127_8.26736077368992_10.2571563438405 chr4 41722384 41723657 + 10.2571563438405 NA TTS (NM_001017362) TTS (NM_001017362) 143 NM_001159565 53598 Mm.29025 NM_016890 ENSMUSG00000028447 Dctn3 p24 dynactin 3 protein-coding common_peak1_368_3132_0.23638324300094_11.7315206758715_10.2571345900346 chr8 25596416 25598368 + 10.2571345900346 NA promoter-TSS (NM_173012) promoter-TSS (NM_173012) 95 NM_173012 270035 Mm.268349 NM_173012 ENSMUSG00000037363 Letm2 6030453H13|D030041N04Rik leucine zipper-EF-hand containing transmembrane protein 2 protein-coding common_peak1_30_328_-0.895261569000935_7.91431298923477_10.2569207395208 chrX 48284787 48285410 + 10.2569207395208 NA intron (NR_045916, intron 1 of 3) intron (NR_045916, intron 1 of 3) 328 NR_045916 100500713 Mm.396609 NR_045916 ENSMUSG00000097197 9530027J09Rik - RIKEN cDNA 9530027J09 gene ncRNA common_peak1_95_986_-0.47990618399159_9.7069531824606_10.252717471838 chr16 52063726 52065847 + 10.252717471838 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 33237 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding unique_peak1_21_35_1.68987274125164_6.01486137206813_10.2505486022387 chr12 25328800 25329361 + 10.2505486022387 NA Intergenic Intergenic 199906 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak1_21_35_1.68987274125164_6.01486137206813_10.2505486022387-2 chr14 18326910 18327430 + 10.2505486022387 NA intron (NM_009455, intron 2 of 5) CpG 4674 NM_009455 22194 Mm.4429 NM_009455 ENSMUSG00000021774 Ube2e1 UbcM3|Ubce5|ubcM2 ubiquitin-conjugating enzyme E2E 1 protein-coding common_peak1_105_551_0.5338296198513_9.37543926670382_10.2503443129931 chr10 121625481 121626508 + 10.2503443129931 NA intron (NM_001081056, intron 1 of 24) CpG 322 NM_001081056 73192 Mm.25042 NM_001081056 ENSMUSG00000034667 Xpot 1110004L07Rik|3110065H13Rik|AI452076|C79645|EXPORTIN-T exportin, tRNA (nuclear export receptor for tRNAs) protein-coding unique_peak1_28_63_1.34866331451257_6.67433165725628_10.2503359018319 chr15 59619966 59620618 + 10.2503359018319 NA Intergenic Intergenic -28362 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_63_254_0.755124448639022_8.37191566117837_10.246373373954 chr8 79370302 79371503 + 10.246373373954 NA intron (NM_008539, intron 2 of 6) intron (NM_008539, intron 2 of 6) 28566 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding common_peak2_46_153_0.936344546731116_7.73495881406046_10.2452014106098 chr17 24220155 24221234 + 10.2452014106098 NA promoter-TSS (NM_028056) promoter-TSS (NM_028056) 75 NM_028056 72016 Mm.23881 NM_028056 ENSMUSG00000024118 1600002H07Rik - RIKEN cDNA 1600002H07 gene protein-coding common_peak1_46_153_0.936344546731116_7.73495881406046_10.2452014106098 chr15 60145231 60146135 + 10.2452014106098 NA Intergenic Lx3B|LINE|L1 -129065 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_164_1753_-0.351007497905531_10.600929283492_10.2443888785855 chr13 55099177 55100560 + 10.2443888785855 NA intron (NR_121592, intron 1 of 13) CpG 427 NM_011307 20184 Mm.259301 NM_011307 ENSMUSG00000025878 Uimc1 9430016E08Rik|D330018D10Rik|D630032M02Rik|RIP110|Rxrip110 ubiquitin interaction motif containing 1 protein-coding common_peak1_32_81_1.2197679430428_6.96743597613948_10.2431065924514 chr1 86415338 86415947 + 10.2431065924514 NA Intergenic Intergenic -10687 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 1700019O17Rik - RIKEN cDNA 1700019O17 gene protein-coding common_peak2_111_1158_-0.438875478615834_9.95922711169855_10.2424322842458 chr5 86064685 86067296 + 10.2424322842458 NA promoter-TSS (NM_007683) promoter-TSS (NM_007683) -407 NM_007683 12617 Mm.4649 NM_007683 ENSMUSG00000029253 Cenpc1 CENP-C|Cenpc centromere protein C1 protein-coding common_peak2_100_513_0.551223644411579_9.28123637139967_10.2407584951822 chr10 43478262 43480534 + 10.2407584951822 NA intron (NM_199028, intron 1 of 3) CpG 258 NM_199028 331623 Mm.490388 NM_199028 ENSMUSG00000038214 Bend3 mKIAA1553 BEN domain containing 3 protein-coding common_peak2_147_1558_-0.373396939113661_10.419706743141_10.2401412810816 chr8 69994879 69996509 + 10.2401412810816 NA intron (NM_001286450, intron 1 of 12) intron (NM_001286450, intron 1 of 12) 690 NM_001286450 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_127_726_0.470278642764642_9.74095087530192_10.2387667738862 chr1 118458693 118459830 + 10.2387667738862 NA promoter-TSS (NR_027901) promoter-TSS (NR_027901) 4 NR_027901 68204 Mm.443536 NR_027901 ENSMUSG00000107722 2900060B14Rik - RIKEN cDNA 2900060B14 gene ncRNA unique_peak2_18_215_-1.15452329876658_7.17762585278018_10.2372824147528 chr4 127007861 127009146 + 10.2372824147528 NA Intergenic Intergenic -12798 NR_045010 71514 Mm.257276 NM_023603 ENSMUSG00000028820 Sfpq 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|OTTMUSG00000009329|PSF|REP1 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) protein-coding common_peak1_95_476_0.569154634459297_9.18242277323516_10.236585175038 chr13 24633058 24634724 + 10.236585175038 NA intron (NM_178658, intron 1 of 13) ID_B1|SINE|B4 -4757 NM_001080381 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding unique_peak2_8_123_-1.67612325970056_6.11613468053659_10.2363053184021 chr1 23923477 23924457 + 10.2363053184021 NA Intergenic ORR1D2|LTR|ERVL-MaLR -1586 NM_028534 98366 Mm.329963 NM_028534 ENSMUSG00000026155 Smap1 1700056O10Rik|4921514B13Rik|4921525H11Rik|AI462175 small ArfGAP 1 protein-coding unique_peak1_22_39_1.61653270920615_6.13019444949044_10.2363053184021 chr7 58742469 58743044 + 10.2363053184021 NA intron (NM_009728, intron 2 of 20) MTEb|LTR|ERVL-MaLR 84554 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_22_39_1.61653270920615_6.13019444949044_10.2363053184021 chr11 115072128 115072481 + 10.2363053184021 NA Intergenic Intergenic -10266 NM_172050 217306 Mm.222667 NM_172050 ENSMUSG00000048498 Cd300e BC034097|CLM2|Cd300le|TREM5 CD300E molecule protein-coding common_peak1_11_150_-1.45124158241934_6.51278394811541_10.236274370886 chr7 141437269 141437556 + 10.236274370886 NA intron (NM_026646, intron 1 of 9) CpG 462 NM_026646 68267 Mm.33729 NM_026646 ENSMUSG00000019082 Slc25a22 1300006L01Rik|AI060884|Gc1 solute carrier family 25 (mitochondrial carrier, glutamate), member 22 protein-coding common_peak1_52_541_-0.666407275910759_8.74894540339849_10.2351577441263 chr9 122293506 122294511 + 10.2351577441263 NA intron (NM_133979, intron 1 of 12) CpG 415 NM_001271873 102566 Mm.87676 NM_133979 ENSMUSG00000037949 Ano10 AI604832|Tmem16k anoctamin 10 protein-coding common_peak1_25_281_-0.984130107757862_7.64748629851986_10.2341542127047 chr7 3665077 3665483 + 10.2341542127047 NA TTS (NM_181820) TTS (NM_181820) 560 NM_027203 69757 Mm.389782 NM_027203 ENSMUSG00000078813 Leng1 1500001K17Rik leukocyte receptor cluster (LRC) member 1 protein-coding common_peak2_218_2391_-0.297548131659191_11.0752276083685_10.2333225483034 chrX 48450052 48455521 + 10.2333225483034 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 10346 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak2_57_591_-0.634177739930024_8.89236449566394_10.231193205948 chr5 77139440 77141090 + 10.231193205948 NA Intergenic Intergenic -25142 NM_175606 74318 Mm.181852 NM_175606 ENSMUSG00000059325 Hopx 1110018K11Rik|1200015P04Rik|2300002F06Rik|AI848177|AW490897|Cameo|Hdop|Hod|Hop|Ob1|Obl|Toto HOP homeobox protein-coding unique_peak2_20_234_-1.0990423027665_7.32699579518175_10.2289502608454 chrX 162735201 162736243 + 10.2289502608454 NA intron (NR_038088, intron 3 of 5) LTR105_Mam|LTR|ERVL -24650 NM_009031 245688 Mm.270186 NM_009031 ENSMUSG00000031353 Rbbp7 AA409861|AI173248|AU019541|BB114024|mRbAp46 retinoblastoma binding protein 7 protein-coding common_peak1_54_561_-0.653135301835011_8.80785866930342_10.2277029892173 chr9 65194896 65195787 + 10.2277029892173 NA Intergenic Intergenic -19349 NM_177460 214424 Mm.31129 NM_177460 ENSMUSG00000032392 Parp16 ARTD15|BC055447|C79952|PARP-16 poly (ADP-ribose) polymerase family, member 16 protein-coding common_peak1_17_206_-1.18880159562666_7.099086159686_10.2276873579194 chr6 122742793 122743267 + 10.2276873579194 NA promoter-TSS (NM_011401) promoter-TSS (NM_011401) -285 NM_011401 20527 Mm.395108 NM_011401 ENSMUSG00000003153 Slc2a3 AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3 solute carrier family 2 (facilitated glucose transporter), member 3 protein-coding unique_peak2_17_206_-1.18880159562666_7.099086159686_10.2276873579194 chr9 118453277 118454525 + 10.2276873579194 NA Intergenic B4A|SINE|B4 24062 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak2_158_990_0.40713503440991_10.1563087643914_10.2276707343669 chr17 8127445 8130524 + 10.2276707343669 NA intron (NM_001083938, intron 8 of 8) intron (NM_001083938, intron 8 of 8) 18804 NM_001083938 100037283 Mm.426736 NM_001083938 ENSMUSG00000095687 Rnaset2a 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2A protein-coding common_peak1_152_938_0.416823945626966_10.0833933204673_10.2276684663939 chr11 118259644 118261320 + 10.2276684663939 NA 3' UTR (NM_001033528, exon 21 of 21) 3' UTR (NM_001033528, exon 21 of 21) -11890 NM_011180 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_27_299_-0.942253940477956_7.7576917202569_10.2276151960899 chr11 5437540 5438156 + 10.2276151960899 NA intron (NM_001080924, intron 1 of 8) intron (NM_001080924, intron 1 of 8) 6999 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding common_peak2_79_361_0.644512962920283_8.82210236854335_10.2271223647302 chr18 77937875 77939230 + 10.2271223647302 NA promoter-TSS (NM_001195633) promoter-TSS (NM_001195633) 85 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding common_peak2_55_571_-0.646694275574108_8.83652419899133_10.2270248532766 chr4 88045310 88047189 + 10.2270248532766 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -12842 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak1_62_248_0.761607227883702_8.34080554600993_10.2268804317058 chr5 36483713 36484292 + 10.2268804317058 NA promoter-TSS (NM_025725) promoter-TSS (NM_025725) 283 NM_001170454 231151 Mm.421558 NM_001170454 ENSMUSG00000029196 Tada2b AA474455|Gm145 transcriptional adaptor 2B protein-coding common_peak1_88_911_-0.499871645400553_9.58295419146446_10.2240344418578 chr6 143099141 143100321 + 10.2240344418578 NA exon (NM_029897, exon 2 of 25) exon (NM_029897, exon 2 of 25) 421 NM_001286578 74741 Mm.130260 NM_029081 ENSMUSG00000030279 C2cd5 5730419I09Rik|C030008B15Rik|CDP138 C2 calcium-dependent domain containing 5 protein-coding common_peak1_30_72_1.27685764585429_6.82825338180716_10.2230693782481-2 chr5 124498034 124498740 + 10.2230693782481 NA intron (NM_021430, intron 6 of 6) intron (NM_021430, intron 6 of 6) 15232 NM_029532 76167 Mm.156035 NM_029532 ENSMUSG00000029402 Snrnp35 6330548G22Rik small nuclear ribonucleoprotein 35 (U11/U12) protein-coding common_peak1_30_72_1.27685764585429_6.82825338180716_10.2230693782481 chr12 99559280 99560051 + 10.2230693782481 NA Intergenic Intergenic 68309 NR_045288 73457 Mm.383439 NR_045288 ENSMUSG00000100211 1700064M15Rik - RIKEN cDNA 1700064M15 gene ncRNA common_peak1_358_4162_-0.222314743892703_11.9122504711939_10.2224977560419 chr13 5861431 5864863 + 10.2224977560419 NA intron (NM_011803, intron 1 of 3) intron (NM_011803, intron 1 of 3) 1658 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak1_51_532_-0.675958166931888_8.72001263929323_10.2188200496779 chr12 31950587 31951296 + 10.2188200496779 NA promoter-TSS (NM_153198) promoter-TSS (NM_153198) -406 NM_153198 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding common_peak1_132_768_0.457060524700534_9.81537005031209_10.2169594857048 chr2 157367006 157368545 + 10.2169594857048 NA intron (NM_026968, intron 1 of 2) CpG 181 NM_026968 69161 Mm.228619 NM_026968 ENSMUSG00000063019 Manbal 1810024K12Rik|AI836500 mannosidase, beta A, lysosomal-like protein-coding common_peak1_19_28_1.8331532325032_5.77455761137917_10.2160787189553 chr2 167934068 167934582 + 10.2160787189553 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 1998 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_58_602_-0.630487786858259_8.92077029847096_10.2154913949336 chrX 106186384 106188150 + 10.2154913949336 NA exon (NM_008828, exon 1 of 11) exon (NM_008828, exon 1 of 11) 167 NM_008828 18655 Mm.316355 NM_008828 ENSMUSG00000062070 Pgk1 Pgk-1 phosphoglycerate kinase 1 protein-coding common_peak2_213_1499_0.334835945158886_10.7181647579627_10.2136396627497 chr9 69988790 69990504 + 10.2136396627497 NA 5' UTR (NM_001008238, exon 1 of 10) 5' UTR (NM_001008238, exon 1 of 10) 181 NM_001008238 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding common_peak2_130_751_0.462498410169236_9.78583805676226_10.2133562136891 chr16 16302238 16303917 + 10.2133562136891 NA exon (NM_198246, exon 1 of 5) exon (NM_198246, exon 1 of 5) 112 NM_198246 70120 Mm.37486 NM_198246 ENSMUSG00000022792 Yars2 2210023C10Rik|tyrRS tyrosyl-tRNA synthetase 2 (mitochondrial) protein-coding common_peak2_117_646_0.494516814235674_9.58488030911034_10.2111701221483 chr1 127231419 127234246 + 10.2111701221483 NA intron (NM_145128, intron 1 of 17) CT-rich|Low_complexity|Low_complexity 27846 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak2_473_4364_0.201079979936154_12.1923059284849_10.2085885267487 chr4 130898394 130903527 + 10.2085885267487 NA Intergenic Intergenic -12374 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding common_peak2_154_1638_-0.363812347486832_10.496693965356_10.2071213149024 chr2 30065694 30067969 + 10.2071213149024 NA exon (NM_001204875, exon 1 of 8) exon (NM_001204875, exon 1 of 8) 357 NM_001204875 56086 Mm.326055 NM_023871 ENSMUSG00000054766 Set 2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I SET nuclear oncogene protein-coding common_peak2_78_354_0.650423876721272_8.79688715275268_10.2066130920452 chr10 120226588 120227968 + 10.2066130920452 NA intron (NM_025431, intron 1 of 2) CpG 218 NM_025431 66225 Mm.291755 NM_025431 ENSMUSG00000020224 Llph 1190005P17Rik LLP homolog, long-term synaptic facilitation (Aplysia) protein-coding common_peak1_31_337_-0.878013861970659_7.96187250529685_10.2029599249419 chrX 152016420 152017110 + 10.2029599249419 NA promoter-TSS (NM_025660) promoter-TSS (NM_025660) 337 NM_019710 24061 Mm.482095 NM_019710 ENSMUSG00000041133 Smc1a 5830426I24Rik|SMC-1A|Sb1.8|Smc1|Smc1alpha|Smc1l1|Smcb|mKIAA0178 structural maintenance of chromosomes 1A protein-coding common_peak1_103_1071_-0.457443323444128_9.83736752873571_10.2024633798096 chr5 124628647 124630373 + 10.2024633798096 NA intron (NM_011596, intron 1 of 19) L2b|LINE|L2 458 NM_011596 21871 Mm.1158 NM_011596 ENSMUSG00000038023 Atp6v0a2 8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2 ATPase, H+ transporting, lysosomal V0 subunit A2 protein-coding common_peak1_98_1017_-0.470067382261531_9.75648815494493_10.2004393385002 chr10 80826541 80827267 + 10.2004393385002 NA exon (NM_008753, exon 1 of 5) exon (NM_008753, exon 1 of 5) 208 NR_027656 100041965 Mm.328806 NR_027656 Oaz1-ps ENSMUSG00000043801|Gm1823|Gm9786|Oaz-ps ornithine decarboxylase antizyme 1, pseudogene pseudo common_peak1_135_793_0.450377997390284_9.8581841958381_10.1999511930022 chr2 154891823 154892866 + 10.1999511930022 NA intron (NM_026030, intron 1 of 8) CpG 562 NM_026030 67204 Mm.377134 NM_026030 ENSMUSG00000074656 Eif2s2 2810026E11Rik|38kDa|AA408636|AA571381|AA986487|AW822225|D2Ertd303e|EIF2|EIF2B eukaryotic translation initiation factor 2, subunit 2 (beta) protein-coding common_peak1_40_423_-0.766477189497773_8.34468185981431_10.1966484161702 chr1 80730221 80730958 + 10.1966484161702 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 27964 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak2_417_4950_-0.203146306251062_12.1719310808366_10.1959395042457 chr1 40512372 40519688 + 10.1959395042457 NA intron (NM_010553, intron 2 of 12) intron (NM_010553, intron 2 of 12) 668 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_76_785_-0.54166396148554_9.34755352151584_10.19504638837 chr16 32200069 32201050 + 10.19504638837 NA Intergenic Intergenic 20759 NM_001033539 328660 Mm.441006 NM_001033539 ENSMUSG00000075269 Bex6 B020003O03Rik brain expressed family member 6 protein-coding unique_peak1_15_16_2.20879042187483_5.19185805218775_10.1935970157413-4 chr7 81155371 81155774 + 10.1935970157413 NA intron (NM_001004184, intron 11 of 17) intron (NM_001004184, intron 11 of 17) 40773 NM_001004184 434203 Mm.389909 NM_001004184 ENSMUSG00000025726 Slc28a1 Cnt1 solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 protein-coding unique_peak1_15_16_2.20879042187483_5.19185805218775_10.1935970157413 chr12 12299756 12300153 + 10.1935970157413 NA intron (NM_029758, intron 2 of 12) intron (NM_029758, intron 2 of 12) 37815 NM_001146119 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding unique_peak1_15_16_2.20879042187483_5.19185805218775_10.1935970157413-2 chr17 35971167 35971572 + 10.1935970157413 NA Intergenic Intergenic -1619 NM_013854 224742 Mm.329022 NM_013854 ENSMUSG00000038762 Abcf1 AU041969|Abc50|D17Wsu166e|GCN20 ATP-binding cassette, sub-family F (GCN20), member 1 protein-coding unique_peak1_15_16_2.20879042187483_5.19185805218775_10.1935970157413-5 chr9 90254534 90254821 + 10.1935970157413 NA intron (NM_194334, intron 1 of 12) intron (NM_194334, intron 1 of 12) 16092 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding unique_peak1_15_16_2.20879042187483_5.19185805218775_10.1935970157413-6 chrX 16637599 16638029 + 10.1935970157413 NA intron (NM_173740, intron 2 of 14) L2|LINE|L2 18116 NM_173740 17161 Mm.21108 NM_173740 ENSMUSG00000025037 Maoa 1110061B18Rik|AA407771 monoamine oxidase A protein-coding unique_peak1_15_16_2.20879042187483_5.19185805218775_10.1935970157413-3 chr5 20864292 20864721 + 10.1935970157413 NA intron (NM_172992, intron 1 of 17) ORR1A2-int|LTR|ERVL-MaLR 17618 NM_172992 68770 Mm.86410 NM_172992 ENSMUSG00000039987 Phtf2 1110054G21Rik|9530062N20Rik|AI447096|C77923 putative homeodomain transcription factor 2 protein-coding common_peak1_26_289_-0.95770152317534_7.70105832842726_10.1907382457632 chrX 159677802 159678427 + 10.1907382457632 NA intron (NM_001135727, intron 1 of 17) RSINE1|SINE|B4 -30487 NM_021389 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_139_1467_-0.384965915946967_10.3271532948697_10.1899925488024 chr10 54039880 54041351 + 10.1899925488024 NA intron (NM_008548, intron 2 of 12) intron (NM_008548, intron 2 of 12) 35181 NM_008548 17155 Mm.117294 NM_008548 ENSMUSG00000003746 Man1a Man1a1|PCR1 mannosidase 1, alpha protein-coding common_peak1_56_211_0.816578264986974_8.13620958705669_10.1884370822415 chr2 32167206 32168199 + 10.1884370822415 NA intron (NM_001159634, intron 1 of 31) intron (NM_001159634, intron 1 of 31) 16554 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak1_81_375_0.633466724574145_8.87132221396471_10.1861009669122 chr6 125145047 125146223 + 10.1861009669122 NA TTS (NM_138747) TTS (NM_138747) 411 NM_001302779 320678 Mm.129415 NM_178787 ENSMUSG00000038271 Iffo1 4733401N06Rik|A930037G23Rik|HOM-TES-103|Iffo intermediate filament family orphan 1 protein-coding common_peak2_81_375_0.633466724574145_8.87132221396471_10.1861009669122 chr1 171064190 171066083 + 10.1861009669122 NA promoter-TSS (NR_106103) promoter-TSS (NR_106103) -484 NR_106103 102466998 NR_106103 ENSMUSG00000099119 Mir6546 Gm27408|mmu-mir-6546 microRNA 6546 ncRNA common_peak1_208_2270_-0.305366374182146_10.9964288036158_10.1841632968682 chr3 89961755 89964104 + 10.1841632968682 NA intron (NM_001081182, intron 1 of 27) intron (NM_001081182, intron 1 of 27) 403 NM_001081182 54667 Mm.30455 NM_001081182 ENSMUSG00000060671 Atp8b2 Id ATPase, class I, type 8B, member 2 protein-coding common_peak2_151_930_0.417563779397163_10.0714192472574_10.1836964685894 chr1 64955800 64957742 + 10.1836964685894 NA promoter-TSS (NM_001039493) promoter-TSS (NM_001039493) 53 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak1_275_3093_-0.25943753882953_11.4655387120343_10.1835389101265 chr19 7205527 7207959 + 10.1835389101265 NA promoter-TSS (NM_134150) promoter-TSS (NM_134150) -459 NM_134150 107260 Mm.203921 NM_134150 ENSMUSG00000024767 Otub1 AI850305 OTU domain, ubiquitin aldehyde binding 1 protein-coding common_peak2_83_858_-0.515815054967252_9.48860679365484_10.1827734447024 chr2 152669257 152671072 + 10.1827734447024 NA intron (NM_010376, intron 1 of 11) intron (NM_010376, intron 1 of 11) 703 NM_001159552 14950 Mm.277327 NM_010376 ENSMUSG00000019188 H13 1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp histocompatibility 13 protein-coding common_peak1_254_2831_-0.27182918607722_11.3316909570444_10.1819338603621 chr16 55973158 55975284 + 10.1819338603621 NA non-coding (NR_027965, exon 1 of 1) non-coding (NR_027965, exon 1 of 1) 396 NR_027965 66391 Mm.472722 NM_133677 ENSMUSG00000102101 Zbtb11os1 2310061J03Rik zinc finger and BTB domain containing 11, opposite strand 1 ncRNA common_peak2_63_651_-0.599250268733197_9.04910301986448_10.1815396020144 chr7 19715757 19716674 + 10.1815396020144 NA promoter-TSS (NM_001109748) promoter-TSS (NM_001109748) -786 NM_016871 53333 Mm.61682 NM_016871 ENSMUSG00000002984 Tomm40 AW539759|Mom35|Tom40 translocase of outer mitochondrial membrane 40 homolog (yeast) protein-coding common_peak2_488_4547_0.196962421182405_12.2494977494835_10.1772440643831 chr12 108629146 108638851 + 10.1772440643831 NA intron (NM_001163395, intron 1 of 12) L1MEc|LINE|L1 -1755 NM_001163396 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774 Ena-vasodilator stimulated phosphoprotein protein-coding common_peak1_64_662_-0.595950539779691_9.07488979022274_10.1771304291814 chr1 95655165 95656317 + 10.1771304291814 NA intron (NM_001159745, intron 2 of 3) intron (NM_001159745, intron 2 of 3) 11853 NM_009183 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak1_37_394_-0.798732328481219_8.22634267882386_10.1741545754551 chr17 56717760 56718373 + 10.1741545754551 NA promoter-TSS (NM_001166474) promoter-TSS (NM_001166474) 304 NM_027244 69875 Mm.279823 NM_027244 ENSMUSG00000002379 Ndufa11 2010012C24Rik|AV006275|B14.7 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11 protein-coding common_peak1_117_1223_-0.42524912646447_10.0447632794604_10.1734478133287 chr2 31138234 31140304 + 10.1734478133287 NA intron (NM_001177648, intron 1 of 16) intron (NM_001177648, intron 1 of 16) 2739 NM_001177649 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_46_482_-0.712748291409756_8.5595052331309_10.1703721629508 chr15 84922452 84923271 + 10.1703721629508 NA promoter-TSS (NM_016714) promoter-TSS (NM_016714) -567 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak1_62_641_-0.60482032717052_9.02401932353704_10.1689064255998 chr10 42887661 42888776 + 10.1689064255998 NA intron (NM_172938, intron 1 of 8) L1M5|LINE|L1 27706 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak1_234_2584_-0.284711890897961_11.1935926197533_10.1657802336708 chr12 108634232 108637649 + 10.1657802336708 NA intron (NM_001163396, intron 1 of 14) intron (NM_001163396, intron 1 of 14) 187 NM_001163396 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774 Ena-vasodilator stimulated phosphoprotein protein-coding common_peak2_242_2682_-0.279154740114357_11.2500539692033_10.1614084764673 chr11 120822936 120826939 + 10.1614084764673 NA promoter-TSS (NM_007988) promoter-TSS (NM_007988) -390 NM_007988 14104 Mm.236443 NM_007988 ENSMUSG00000025153 Fasn A630082H08Rik|FAS fatty acid synthase protein-coding common_peak2_346_2888_0.24457550772674_11.618642242428_10.1612148332656 chr3 61405962 61411497 + 10.1612148332656 NA Intergenic Intergenic 44222 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak2_192_2079_-0.319562520582195_10.8625865527374_10.1606441814351 chr11 102406793 102409243 + 10.1606441814351 NA promoter-TSS (NM_026542) promoter-TSS (NM_026542) -501 NM_026542 68066 Mm.44226 NM_026542 ENSMUSG00000018677 Slc25a39 3010027G13Rik|D11Ertd333e solute carrier family 25, member 39 protein-coding common_peak1_44_142_0.966307300786243_7.64302498717151_10.1604134391114 chr14 25420773 25421640 + 10.1604134391114 NA Intergenic Intergenic -37979 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_206_2245_-0.306412376000523_10.9799360244003_10.160340394954 chr11 73198515 73200628 + 10.160340394954 NA promoter-TSS (NM_031251) promoter-TSS (NM_031251) 89 NM_029031 74637 Mm.200905 NM_029031 ENSMUSG00000005951 Shpk 4930431K22Rik|AI194947|AW260459|Carkl sedoheptulokinase protein-coding common_peak2_208_1452_0.338926628891901_10.6742823020788_10.1577803934532 chr17 17373498 17375226 + 10.1577803934532 NA promoter-TSS (NM_025934) promoter-TSS (NM_025934) 30 NM_025934 67045 Mm.35117 NM_025934 ENSMUSG00000023852 Riok2 2010110K24Rik|2410085M17Rik RIO kinase 2 (yeast) protein-coding unique_peak1_18_25_1.8999244852558_5.65040196076899_10.1561485649771-3 chr7 139147443 139147879 + 10.1561485649771 NA intron (NM_001162540, intron 1 of 11) intron (NM_001162540, intron 1 of 11) 40833 NM_021302 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding unique_peak1_18_25_1.8999244852558_5.65040196076899_10.1561485649771-2 chr6 108779871 108780256 + 10.1561485649771 NA Intergenic Intergenic -2996 NM_026011 67166 Mm.271178 NM_026011 ENSMUSG00000030105 Arl8b 2610313E07Rik|3100002J04Rik|Arl10c|gie1 ADP-ribosylation factor-like 8B protein-coding unique_peak1_18_25_1.8999244852558_5.65040196076899_10.1561485649771 chr10 88385753 88386124 + 10.1561485649771 NA intron (NM_001004164, intron 1 of 20) intron (NM_001004164, intron 1 of 20) 6526 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding unique_peak1_27_59_1.37967415440941_6.59672767281322_10.1559162117474 chr12 69502019 69502659 + 10.1559162117474 NA Intergenic Intergenic -26789 NR_038061 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak1_27_59_1.37967415440941_6.59672767281322_10.1559162117474-2 chr7 80828945 80829524 + 10.1559162117474 NA Intergenic B3A|SINE|B2 -25903 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_27_59_1.37967415440941_6.59672767281322_10.1559162117474 chr5 150262789 150263403 + 10.1559162117474 NA intron (NM_172887, intron 1 of 60) intron (NM_172887, intron 1 of 60) 3166 NM_172887 320365 Mm.216590 NM_172887 ENSMUSG00000056602 Fry 13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143 FRY microtubule binding protein protein-coding common_peak1_91_942_-0.489428534208873_9.63639969357066_10.1552468773034 chr11 106486924 106487860 + 10.1552468773034 NA intron (NM_023913, intron 1 of 21) CpG 404 NM_023913 78943 Mm.340943 NM_023913 ENSMUSG00000020715 Ern1 9030414B18Rik|AI225830|C85377|Ire1a|Ire1alpha|Ire1p endoplasmic reticulum (ER) to nucleus signalling 1 protein-coding common_peak1_147_895_0.42565335152652_10.0201815978209_10.1552220631539 chr9 122350988 122352502 + 10.1552220631539 NA 5' UTR (NM_026179, exon 1 of 7) 5' UTR (NM_026179, exon 1 of 7) 129 NM_026179 67469 Mm.280254 NM_026179 ENSMUSG00000032540 Abhd5 1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2 abhydrolase domain containing 5 protein-coding unique_peak2_38_403_-0.785268033143935_8.26557746617983_10.1547630648423 chr10 44402194 44404282 + 10.1547630648423 NA Intergenic Intergenic 43562 NR_035450 100316688 NR_035450 ENSMUSG00000089260 Mir1929 mir-1929|mmu-mir-1929 microRNA 1929 ncRNA common_peak2_38_403_-0.785268033143935_8.26557746617983_10.1547630648423 chr5 105695374 105696940 + 10.1547630648423 NA Intergenic Intergenic -3812 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_72_314_0.683111007998349_8.64076352238645_10.154338501409 chr4 134244734 134245740 + 10.154338501409 NA intron (NR_040436, intron 4 of 4) CpG 354 NM_024215 68040 Mm.300404 NM_024215 ENSMUSG00000028840 Zfp593 3110024A21Rik|AV062409|E130106C14Rik|ZNF593 zinc finger protein 593 protein-coding common_peak1_72_314_0.683111007998349_8.64076352238645_10.154338501409 chr1 128356774 128357693 + 10.154338501409 NA intron (NM_008567, intron 1 of 16) intron (NM_008567, intron 1 of 16) 2472 NM_008567 17219 Mm.4933 NM_008567 ENSMUSG00000026355 Mcm6 ASP-l1|D1Wsu22e|Mcmd6 minichromosome maintenance complex component 6 protein-coding common_peak1_170_1821_-0.342674008098593_10.6599702397528_10.1519244199712 chr5 72743381 72745656 + 10.1519244199712 NA intron (NM_001289495, intron 1 of 14) MTEb|LTR|ERVL-MaLR -7916 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak2_390_3385_0.226826788792298_11.8387796522918_10.1511884833552 chr9 13825999 13828961 + 10.1511884833552 NA promoter-TSS (NM_026665) promoter-TSS (NM_026665) -247 NM_176836 72826 Mm.246174 NM_176836 ENSMUSG00000037808 Fam76b 2810485I05Rik|C78303 family with sequence similarity 76, member B protein-coding common_peak2_120_1255_-0.41805390425618_10.0855937967635_10.1511473132088 chr13 14612410 14614273 + 10.1511473132088 NA promoter-TSS (NM_008944) promoter-TSS (NM_008944) 99 NM_008944 19166 Mm.252255 NM_008944 ENSMUSG00000015671 Psma2 Lmpc3 proteasome (prosome, macropain) subunit, alpha type 2 protein-coding common_peak2_239_1756_0.309594890148396_10.9336959210826_10.1497730542896 chr2 30593809 30596272 + 10.1497730542896 NA promoter-TSS (NM_030137) promoter-TSS (NM_030137) -4 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding unique_peak2_60_621_-0.616251319083631_8.97264511058879_10.1474433101652 chr3 60574371 60577302 + 10.1474433101652 NA intron (NM_001310514, intron 2 of 8) intron (NM_001310514, intron 2 of 8) 74657 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_52_540_-0.663743018383704_8.74761327463496_10.1465544054617 chr17 25115221 25116691 + 10.1465544054617 NA promoter-TSS (NM_027880) promoter-TSS (NM_027880) 11 NM_001163661 71718 Mm.288702 NM_027880 ENSMUSG00000024170 Telo2 1200003M09Rik|AI415602|Tel2|mKIAA0683 telomere maintenance 2 protein-coding common_peak1_30_327_-0.890869799883777_7.9121171046762_10.1435407077191 chr7 106256226 106256878 + 10.1435407077191 NA Intergenic L1Md_T|LINE|L1 -41212 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak1_123_695_0.47696333125829_9.68142516147787_10.1429942002199 chr1 193207674 193208565 + 10.1429942002199 NA Intergenic Intergenic -6573 NM_153137 215243 Mm.261259 NM_153137 ENSMUSG00000037318 Traf3ip3 6030423D04Rik|AI115021|T3jam TRAF3 interacting protein 3 protein-coding common_peak2_53_550_-0.657088630545207_8.77736419329855_10.1425864599983 chr11 82182550 82184293 + 10.1425864599983 NA Intergenic Intergenic -3609 NM_011329 20290 Mm.1283 NM_011329 ENSMUSG00000020702 Ccl1 BF534335|I-309|Scya1|Tca-3 chemokine (C-C motif) ligand 1 protein-coding unique_peak2_5_95_-2.02441165500177_5.57275667322027_10.1423233774857 chrX 75759439 75760203 + 10.1423233774857 NA intron (NR_029443, intron 2 of 8) intron (NR_029443, intron 2 of 8) 4878 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA common_peak1_265_2966_-0.264276587631549_11.4026509176645_10.1421024093466 chr18 10180719 10182231 + 10.1421024093466 NA 5' UTR (NM_009071, exon 1 of 33) 5' UTR (NM_009071, exon 1 of 33) 317 NM_009071 19877 Mm.6710 NM_009071 ENSMUSG00000024290 Rock1 1110055K06Rik|Rock-I Rho-associated coiled-coil containing protein kinase 1 protein-coding common_peak2_55_570_-0.644169874158562_8.83526199828356_10.1407830356157 chr11 120457162 120458711 + 10.1407830356157 NA promoter-TSS (NM_152807) promoter-TSS (NM_152807) 127 NM_025560 66431 Mm.45063 NM_025560 ENSMUSG00000039670 Oxld1 1810049H13Rik oxidoreductase like domain containing 1 protein-coding common_peak2_142_853_0.434098086961937_9.95514130310146_10.1406816747365 chr19 11518080 11519891 + 10.1406816747365 NA intron (NM_027209, intron 1 of 6) intron (NM_027209, intron 1 of 6) 426 NM_027209 69774 Mm.436639 NM_027209 ENSMUSG00000024677 Ms4a6b 1810027D10Rik membrane-spanning 4-domains, subfamily A, member 6B protein-coding unique_peak1_20_32_1.73308052444004_5.91093438157848_10.140339151197-2 chr2 73348602 73349064 + 10.140339151197 NA intron (NM_001190297, intron 15 of 16) B2_Mm1t|SINE|B2 36181 NM_029022 74616 Mm.247457 NM_029022 ENSMUSG00000008226 Scrn3 4833415E20Rik|AI427019|AV002033|Ses3 secernin 3 protein-coding unique_peak1_20_32_1.73308052444004_5.91093438157848_10.140339151197 chr15 50869416 50870064 + 10.140339151197 NA intron (NM_032000, intron 1 of 5) CpG 19309 NM_001310481 83925 Mm.30466 NM_032000 ENSMUSG00000038679 Trps1 AI115454|AI447310|D15Ertd586e trichorhinophalangeal syndrome I (human) protein-coding common_peak1_21_242_-1.06501476091183_7.39230512314987_10.1400902224491 chr6 8642784 8643215 + 10.1400902224491 NA intron (NM_001252266, intron 11 of 11) intron (NM_001252266, intron 11 of 11) 115459 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding unique_peak2_21_242_-1.06501476091183_7.39230512314987_10.1400902224491 chr16 20425553 20426607 + 10.1400902224491 NA intron (NM_176839, intron 1 of 6) CpG 314 NM_013790 27416 Mm.20845 NM_013790 ENSMUSG00000022822 Abcc5 2900011L11Rik|AI132311|Abcc5a|Abcc5b|Mrp5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 protein-coding common_peak2_183_1217_0.367999319746247_10.4342980777795_10.1398108782111 chr8 90954173 90956230 + 10.1398108782111 NA intron (NM_001310530, intron 1 of 37) intron (NM_001310530, intron 1 of 37) 22952 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_111_599_0.510970681894756_9.48430403144326_10.139691310408 chr15 38278766 38281481 + 10.139691310408 NA Intergenic Intergenic 20588 NM_013692 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding unique_peak2_14_178_-1.30177165585291_6.8329299493378_10.1387840153591 chr1 165717954 165719170 + 10.1387840153591 NA Intergenic Intergenic -10468 NM_001038846 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding common_peak1_50_521_-0.680235219442428_8.68778838684867_10.1375792341474 chr1 180225748 180226637 + 10.1375792341474 NA TTS (NM_001128605) TTS (NM_001128605) 19758 NM_011183 19165 Mm.330850 NM_011183 ENSMUSG00000010609 Psen2 ALG-3|Ad4h|Alg3|PS-2|PS2|Psnl2|STM2 presenilin 2 protein-coding common_peak1_153_948_0.413069574938312_10.0967990644903_10.137294405639 chr8 111144698 111146292 + 10.137294405639 NA promoter-TSS (NR_040364) promoter-TSS (NR_040364) 3 NR_040363 434350 Mm.442061 NR_040363 9430091E24Rik - RIKEN cDNA 9430091E24 gene ncRNA common_peak1_22_252_-1.0445327706008_7.46072718939391_10.1368179557574 chrX 74253928 74254446 + 10.1368179557574 NA promoter-TSS (NM_007927) promoter-TSS (NM_007927) -500 NM_007927 13726 Mm.18892 NM_007927 ENSMUSG00000001964 Emd AW550900|Sta emerin protein-coding common_peak2_98_1016_-0.468649500043336_9.75577921383583_10.1357121131309 chr19 57354779 57356896 + 10.1357121131309 NA intron (NR_040316, intron 1 of 2) intron (NR_040316, intron 1 of 2) 5062 NR_040316 320879 Mm.375089 NR_040316 ENSMUSG00000097785 B230217O12Rik - RIKEN cDNA B230217O12 gene ncRNA common_peak1_196_1338_0.352166371300989_10.5630234309748_10.1345237288227 chr12 78225437 78227315 + 10.1345237288227 NA promoter-TSS (NM_172952) promoter-TSS (NM_172952) -279 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding unique_peak1_16_19_2.08160816608681_5.36273217793077_10.1336093614635 chr1 106649094 106649497 + 10.1336093614635 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) 64995 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding unique_peak1_16_19_2.08160816608681_5.36273217793077_10.1336093614635-3 chr8 77493274 77493636 + 10.1336093614635 NA intron (NM_030113, intron 1 of 22) ORR1G|LTR|ERVL-MaLR -23601 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_16_19_2.08160816608681_5.36273217793077_10.1336093614635 chr5 66073921 66074311 + 10.1336093614635 NA intron (NM_001291226, intron 2 of 5) intron (NM_001291226, intron 2 of 5) 24063 NM_139065 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding unique_peak1_16_19_2.08160816608681_5.36273217793077_10.1336093614635-2 chr18 9444708 9445083 + 10.1336093614635 NA intron (NM_026484, intron 1 of 9) MTC|LTR|ERVL-MaLR 5255 NM_026484 67974 Mm.86523 NM_026484 ENSMUSG00000024286 Ccny 1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik cyclin Y protein-coding common_peak2_250_1867_0.300518741104337_11.0175381102618_10.1319365957775 chr1 166378009 166380756 + 10.1319365957775 NA 5' UTR (NM_030245, exon 1 of 8) 5' UTR (NM_030245, exon 1 of 8) 215 NM_030245 27878 Mm.100665 NM_030245 ENSMUSG00000026563 Tada1 2900026B15Rik|D1Ertd251e|Staf42|Tada1l transcriptional adaptor 1 protein-coding common_peak2_165_1762_-0.347698578965478_10.6099674698374_10.1317155439183 chr17 74338113 74340087 + 10.1317155439183 NA exon (NM_001162870, exon 1 of 17) exon (NM_001162870, exon 1 of 17) 113 NM_016962 50850 Mm.19804 NM_016962 ENSMUSG00000024068 Spast Spg4|mKIAA1083 spastin protein-coding unique_peak1_17_22_1.98112340581565_5.51412365896484_10.1256210713755 chr11 16969352 16969796 + 10.1256210713755 NA Intergenic L1_Mur3|LINE|L1 18164 NM_176982 319701 Mm.120672 NM_176982 ENSMUSG00000044966 Fbxo48 A630050E13Rik F-box protein 48 protein-coding unique_peak1_17_22_1.98112340581565_5.51412365896484_10.1256210713755-2 chr14 103666467 103666943 + 10.1256210713755 NA intron (NM_198014, intron 2 of 6) intron (NM_198014, intron 2 of 6) 16462 NM_198014 105439 Mm.27548 NM_198014 ENSMUSG00000055717 Slain1 9630044O09Rik|AA675320|AW742596 SLAIN motif family, member 1 protein-coding unique_peak2_9_131_-1.57987220291403_6.25445801790144_10.1240782130565 chr17 35301432 35302501 + 10.1240782130565 NA Intergenic Intergenic -18592 NM_010390 15006 Mm.466882 NM_010390 ENSMUSG00000079507 H2-Q1 H-2Q1|Q1|Q1b|Q1d|Q1k|Qa-1|Qa1|Qed-1 histocompatibility 2, Q region locus 1 protein-coding unique_peak2_19_223_-1.11622069442683_7.24924457484419_10.1220895643463 chr16 33061706 33063014 + 10.1220895643463 NA promoter-TSS (NM_172823) promoter-TSS (NM_172823) -161 NM_172823 239833 Mm.131951 NM_172823 ENSMUSG00000022802 Lmln 5330415H22Rik|AI465495 leishmanolysin-like (metallopeptidase M8 family) protein-coding common_peak2_44_461_-0.725570403851426_8.48896383949035_10.1214535040491 chrX 48284115 48285508 + 10.1214535040491 NA intron (NR_045916, intron 1 of 3) intron (NR_045916, intron 1 of 3) 615 NR_045916 100500713 Mm.396609 NR_045916 ENSMUSG00000097197 9530027J09Rik - RIKEN cDNA 9530027J09 gene ncRNA common_peak2_173_1126_0.381138341679987_10.3288409710122_10.1208093453349 chr7 81522650 81524355 + 10.1208093453349 NA promoter-TSS (NR_045299) promoter-TSS (NR_045299) -48 NR_045299 100504421 Mm.217071 NR_045299 ENSMUSG00000097277 2900076A07Rik WI1-1616M8.2 RIKEN cDNA 2900076A07 gene ncRNA common_peak1_80_826_-0.525401436178397_9.42904280108208_10.1187561687052 chr4 140701840 140702777 + 10.1187561687052 NA exon (NM_173867, exon 2 of 13) exon (NM_173867, exon 2 of 13) 835 NM_173867 108911 Mm.253 NM_173867 ENSMUSG00000040945 Rcc2 2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470 regulator of chromosome condensation 2 protein-coding common_peak2_40_121_1.03070592750254_7.44609030131416_10.1181577216777 chrX 53669565 53670455 + 10.1181577216777 NA exon (NM_001018063, exon 1 of 1) exon (NM_001018063, exon 1 of 1) 398 NM_001018063 553127 Mm.328602 NM_001018063 ENSMUSG00000067924 Cxx1b Mart8c CAAX box 1B protein-coding common_peak2_157_983_0.406196896960433_10.1456129538195_10.116998832801 chr2 170153294 170155955 + 10.116998832801 NA Intergenic Intergenic -11949 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_154_957_0.410905945876447_10.1093348186744_10.1149847423514 chr14 46831046 46832816 + 10.1149847423514 NA promoter-TSS (NM_026832) promoter-TSS (NM_026832) -313 NM_026832 68755 Mm.343809 NM_026832 ENSMUSG00000055128 Cgrrf1 1110038G02Rik|1810009H17Rik|CGR19 cell growth regulator with ring finger domain 1 protein-coding common_peak1_24_47_1.50105269141523_6.33548884642877_10.1108606428322 chr10 12835918 12836431 + 10.1108606428322 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 25561 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_99_507_0.55055512773693_9.26396225064063_10.1099595729712 chr15 89475477 89476882 + 10.1099595729712 NA promoter-TSS (NR_077233) promoter-TSS (NR_077233) -73 NR_077233 100532730 Mm.461541 NR_077233 C230037L18Rik - RIKEN cDNA C230037L18 gene ncRNA common_peak2_27_298_-0.937436924180179_7.75528321210802_10.1091748680063 chr15 62104021 62105523 + 10.1091748680063 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 65515 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 plasmacytoma variant translocation 1 ncRNA common_peak1_27_298_-0.937436924180179_7.75528321210802_10.1091748680063 chr2 68436070 68436771 + 10.1091748680063 NA intron (NM_016866, intron 1 of 17) intron (NM_016866, intron 1 of 17) 35561 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding common_peak1_39_413_-0.775740418682192_8.30561674815823_10.1083155623119 chr15 79950648 79951304 + 10.1083155623119 NA Intergenic Intergenic -18330 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak1_39_413_-0.775740418682192_8.30561674815823_10.1083155623119-2 chr2 121270761 121271555 + 10.1083155623119 NA intron (NM_001290830, intron 1 of 26) CpG 249 NM_001290830 27223 Mm.215389 NM_013735 ENSMUSG00000043909 Trp53bp1 53BP1|Tp53bp1|m53BP1|p53BP1 transformation related protein 53 binding protein 1 protein-coding common_peak2_79_815_-0.528066491968007_9.40839209598749_10.1035350661747 chr2 32395161 32396877 + 10.1035350661747 NA 5' UTR (NM_133783, exon 1 of 7) 5' UTR (NM_133783, exon 1 of 7) 129 NM_133783 96979 Mm.28048 NM_133783 ENSMUSG00000026820 Ptges2 0610038H10Rik|C79137|Gbf1|Mpges2|Pges2 prostaglandin E synthase 2 protein-coding common_peak1_124_1298_-0.409064936433177_10.1386532472313_10.1031923502607 chr4 135203016 135204649 + 10.1031923502607 NA Intergenic Intergenic 68928 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak1_575_5637_0.176779155234025_12.5493573401874_10.1013237647653 chr8 3352173 3355797 + 10.1013237647653 NA intron (NM_001033378, intron 1 of 10) ID_B1|SINE|B4 570 NM_001033378 319493 Mm.234565 NM_001033378 ENSMUSG00000074497 A430078G23Rik - RIKEN cDNA A430078G23 gene protein-coding common_peak1_149_1578_-0.368033436384213_10.4407787376681_10.0974312132643 chr14 57889082 57890450 + 10.0974312132643 NA intron (NM_029492, intron 1 of 12) intron (NM_029492, intron 1 of 12) 496 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|ENSMUSG00000055956|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak2_209_1463_0.336492703579133_10.6839461900736_10.0920067796772 chr12 55397984 55399854 + 10.0920067796772 NA promoter-TSS (NM_011968) promoter-TSS (NM_011968) 94 NM_011968 26443 Mm.30210 NM_011968 ENSMUSG00000021024 Psma6 IOTA proteasome (prosome, macropain) subunit, alpha type 6 protein-coding common_peak1_31_336_-0.873739206870335_7.95973517774669_10.0913656875809 chr14 75032247 75033028 + 10.0913656875809 NA intron (NM_198642, intron 2 of 13) intron (NM_198642, intron 2 of 13) 16610 NM_198642 271221 Mm.320280 NM_198642 ENSMUSG00000034959 Rubcnl 5031414D18Rik|Gm744|Gm911|Kiaa0226l RUN and cysteine rich domain containing beclin 1 interacting protein like protein-coding common_peak1_31_336_-0.873739206870335_7.95973517774669_10.0913656875809-2 chr2 3742802 3743499 + 10.0913656875809 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 29692 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_259_1959_0.293501203703038_11.0833885408541_10.0897305838251 chr18 35737888 35741011 + 10.0897305838251 NA exon (NM_028261, exon 3 of 8) exon (NM_028261, exon 3 of 8) 1105 NM_001289592 72512 Mm.45995 NM_028261 ENSMUSG00000024349 Tmem173 2610307O08Rik|ERIS|MPYS|Mita|STING transmembrane protein 173 protein-coding common_peak2_136_1432_-0.388485337727287_10.2905802253985_10.0892449404612 chr4 32163424 32166786 + 10.0892449404612 NA Intergenic Intergenic 200998 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_78_804_-0.530745881888663_9.38747203205765_10.0891525981257 chr13 32981259 32982905 + 10.0891525981257 NA Intergenic Intergenic 16569 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak1_29_317_-0.904226522686652_7.86076969394103_10.0881365298297 chr8 25993758 25994349 + 10.0881365298297 NA promoter-TSS (NM_029037) promoter-TSS (NM_029037) 68 NM_029037 74653 Mm.17631 NM_029037 ENSMUSG00000037251 Pomk 4930444A02Rik|Sgk196 protein-O-mannose kinase protein-coding unique_peak2_2_65_-2.71045558482543_4.68916632694574_10.0880530978707 chr11 116021044 116021647 + 10.0880530978707 NA TTS (NM_008211) TTS (NM_008211) 3159 NM_008211 15081 Mm.18516 NM_008211 ENSMUSG00000016559 H3f3b 9430068D06Rik|H3.3B H3 histone, family 3B protein-coding common_peak1_175_1877_-0.335346671400755_10.7073080119534_10.0878110511122 chr10 61259726 61261320 + 10.0878110511122 NA intron (NM_001081127, intron 2 of 21) intron (NM_001081127, intron 2 of 21) 12915 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak2_62_640_-0.602571386666959_9.02289485328526_10.0876862626581 chr4 120666061 120668084 + 10.0876862626581 NA exon (NM_019563, exon 1 of 1) exon (NM_019563, exon 1 of 1) 509 NM_019563 56222 Mm.272646 NM_019563 ENSMUSG00000070803 Cited4 MRG-2|Mrg2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 protein-coding common_peak1_24_270_-0.996133849217487_7.58408211674513_10.0871464641758 chr1 43465308 43465744 + 10.0871464641758 NA intron (NM_010879, intron 1 of 4) intron (NM_010879, intron 1 of 4) 19775 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_16_196_-1.2185155584822_7.01279404021527_10.0867815554994 chrX 166510546 166510949 + 10.0867815554994 NA promoter-TSS (NM_001007577) promoter-TSS (NM_001007577) -269 NM_001007577 245695 Mm.336318 NM_001007577 ENSMUSG00000051224 Tceanc A630018P17Rik|Gm390 transcription elongation factor A (SII) N-terminal and central domain containing protein-coding unique_peak2_16_196_-1.2185155584822_7.01279404021527_10.0867815554994 chr14 118834353 118835434 + 10.0867815554994 NA intron (NM_023878, intron 1 of 4) intron (NM_023878, intron 1 of 4) -20057 NM_021386 58187 Mm.390755 NM_021386 ENSMUSG00000022132 Cldn10 6720456I16Rik|Cldn10a|Cldn10b|D14Ertd728e claudin 10 protein-coding common_peak2_195_1330_0.351806003371506_10.5541978575976_10.0866211213763 chr19 47135411 47138916 + 10.0866211213763 NA intron (NM_133746, intron 1 of 2) intron (NM_133746, intron 1 of 2) 1131 NM_133746 72691 Mm.31663 NM_133746 ENSMUSG00000033033 Calhm2 2810048G17Rik|Fam26b calcium homeostasis modulator 2 protein-coding common_peak1_285_3216_-0.252697562883956_11.5251514392108_10.0864063969509 chr9 45293315 45296156 + 10.0864063969509 NA Intergenic Intergenic -24365 NM_001013373 214531 Mm.394987 NM_001013373 ENSMUSG00000037129 Tmprss13 BC010843|Tpmrss13 transmembrane protease, serine 13 protein-coding common_peak2_577_5663_0.176275264671958_12.555743182419_10.084760154469 chr1 171558161 171564680 + 10.084760154469 NA intron (NM_018729, intron 1 of 8) intron (NM_018729, intron 1 of 8) 2227 NM_018729 18106 Mm.2299 NM_018729 ENSMUSG00000004709 Cd244 2B4|C9.1|F730046O15Rik|Ly90|NAIL|NKR2B4|Nmrk|SLAMF4 CD244 natural killer cell receptor 2B4 protein-coding common_peak2_346_2890_0.243577102814305_11.6191414448842_10.0844359141698 chr12 73583883 73587856 + 10.0844359141698 NA intron (NM_008856, intron 1 of 13) intron (NM_008856, intron 1 of 13) 1073 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak2_250_1868_0.29974662706884_11.0179241672796_10.0842473919485 chr18 79107569 79110744 + 10.0842473919485 NA intron (NM_053099, intron 1 of 5) CpG 235 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_550_5320_0.181741811346757_12.4683525938563_10.0839074746125 chr7 101464368 101467962 + 10.0839074746125 NA intron (NM_001243757, intron 2 of 30) intron (NM_001243757, intron 2 of 30) -9211 NR_029791 387157 NR_029791 ENSMUSG00000065446 Mir139 Mirn139|mir-139|mmu-mir-139 microRNA 139 ncRNA common_peak2_147_1555_-0.370618071402069_10.4183173092852_10.0830952517441 chr9 92373571 92376524 + 10.0830952517441 NA Intergenic Intergenic 65670 NM_001033184 78459 Mm.179195 NM_001033184 ENSMUSG00000074139 1700057G04Rik - RIKEN cDNA 1700057G04 gene protein-coding common_peak1_96_994_-0.473214352067602_9.72194553939721_10.0818869566551 chr7 132809919 132811625 + 10.0818869566551 NA intron (NM_212473, intron 1 of 4) intron (NM_212473, intron 1 of 4) 2424 NM_212473 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_159_1001_0.402304367994637_10.1698189771925_10.0765981981058 chr16 4077168 4078707 + 10.0765981981058 NA promoter-TSS (NM_026508) promoter-TSS (NM_026508) -127 NM_026508 68015 Mm.123366 NM_026508 ENSMUSG00000005981 Trap1 2410002K23Rik|HSP75 TNF receptor-associated protein 1 protein-coding common_peak2_162_1727_-0.351043058242098_10.5793659730424_10.0749094546219 chr9 109930788 109933243 + 10.0749094546219 NA intron (NM_008633, intron 1 of 18) CpG 241 NM_008633 17758 Mm.217318 NM_008633 ENSMUSG00000032479 Map4 AA407148|MAP-4|Mtap-4|Mtap4 microtubule-associated protein 4 protein-coding common_peak1_73_752_-0.550110092274162_9.28145100853485_10.0747924021797 chr15 103152319 103153090 + 10.0747924021797 NA TTS (NM_027885) TTS (NM_027885) -5876 NR_045743 432989 Mm.383979 NR_045743 ENSMUSG00000097003 D930007P13Rik - Riken cDNA D930007P13 gene ncRNA common_peak2_125_1309_-0.407129625286673_10.1517862837815_10.0739826603712 chr4 71290219 71292688 + 10.0739826603712 NA Intergenic IAPLTR4|LTR|ERVK -756525 NM_172694 230316 Mm.251188 NM_172694 ENSMUSG00000039270 Megf9 4933405H16Rik|9630025C07|Egfl5|mKIAA0818 multiple EGF-like-domains 9 protein-coding common_peak1_23_43_1.5543438494548_6.2366035433647_10.0725126002957 chr13 51741186 51741663 + 10.0725126002957 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 52323 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding unique_peak1_23_43_1.5543438494548_6.2366035433647_10.0725126002957 chr8 121192744 121193183 + 10.0725126002957 NA Intergenic B3|SINE|B2 65278 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak1_68_701_-0.572731900057766_9.16896127027568_10.071600647915 chr17 46327449 46328306 + 10.071600647915 NA exon (NM_170680, exon 1 of 21) exon (NM_170680, exon 1 of 21) 146 NM_170680 224814 Mm.76543 NM_145140 ENSMUSG00000032842 Abcc10 Mrp7|mFLJ00002 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 protein-coding unique_peak1_26_55_1.41485264478199_6.5147812444486_10.0712968718451-2 chr17 22165435 22166024 + 10.0712968718451 NA intron (NM_177596, intron 1 of 4) intron (NM_177596, intron 1 of 4) 248 NM_177596 210853 Mm.441622 NM_177596 ENSMUSG00000063383 Zfp947 6720451E15|EG210853|Gm4769 zinc finger protein 947 protein-coding unique_peak1_26_55_1.41485264478199_6.5147812444486_10.0712968718451 chr15 58164200 58164865 + 10.0712968718451 NA Intergenic B1_Mur4|SINE|Alu 23096 NM_029734 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding common_peak1_11_149_-1.44165553359014_6.50799092370081_10.071296871845 chrX 140956437 140956730 + 10.071296871845 NA exon (NM_001164177, exon 1 of 5) exon (NM_001164177, exon 1 of 5) 128 NM_016883 53380 Mm.17640 NM_016883 ENSMUSG00000031429 Psmd10 AW554874 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 protein-coding common_peak1_23_260_-1.01413052847779_7.52084073233099_10.0704464942682-2 chr2 144714612 144715100 + 10.0704464942682 NA intron (NM_025314, intron 4 of 5) RMER13B|LTR|ERVK -108810 NM_025490 66328 Mm.45377 NM_025490 ENSMUSG00000027431 Scp2d1 1700010M22Rik SCP2 sterol-binding domain containing 1 protein-coding common_peak1_23_260_-1.01413052847779_7.52084073233099_10.0704464942682 chr2 45172311 45172863 + 10.0704464942682 NA Intergenic Intergenic -59308 NM_015753 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak2_37_106_1.0855095281821_7.2842217504922_10.0703800950697 chr4 142083842 142084792 + 10.0703800950697 NA promoter-TSS (NM_145402) promoter-TSS (NM_145402) -13 NM_145402 214359 Mm.27587 NM_145402 ENSMUSG00000040616 Tmem51 BC003277 transmembrane protein 51 protein-coding common_peak1_132_1387_-0.3948915399159_10.2413460826203_10.0694287121801 chr4 95052278 95053572 + 10.0694287121801 NA promoter-TSS (NM_010591) promoter-TSS (NM_010591) -703 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak1_237_1737_0.310472314611598_10.9184485241202_10.0682737301311 chr4 133011235 133014034 + 10.0682737301311 NA intron (NM_146155, intron 2 of 6) intron (NM_146155, intron 2 of 6) 1128 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak1_230_2533_-0.286344752214459_11.1640284330336_10.0664060016193 chr11 120823253 120826259 + 10.0664060016193 NA promoter-TSS (NM_007988) promoter-TSS (NM_007988) -209 NM_007988 14104 Mm.236443 NM_007988 ENSMUSG00000025153 Fasn A630082H08Rik|FAS fatty acid synthase protein-coding common_peak2_109_1133_-0.439301595369956_9.92755412725725_10.0662121963349-2 chr7 80687562 80689603 + 10.0662121963349 NA intron (NM_173863, intron 1 of 14) CpG 295 NM_173863 70461 Mm.392175 NM_173863 ENSMUSG00000030527 Crtc3 2610312F20Rik|6332415K15Rik|AI429792|BC011210|TORC3 CREB regulated transcription coactivator 3 protein-coding common_peak2_109_1133_-0.439301595369956_9.92755412725725_10.0662121963349 chr17 29263177 29264907 + 10.0662121963349 NA promoter-TSS (NM_026845) promoter-TSS (NM_026845) -71 NM_026845 68816 Mm.328928 NM_026845 ENSMUSG00000024007 Ppil1 1110060O10Rik|AI327391|Cypl1 peptidylprolyl isomerase (cyclophilin)-like 1 protein-coding common_peak2_148_905_0.421557762061386_10.0341461210769_10.061502119873 chr13 74639015 74640648 + 10.061502119873 NA promoter-TSS (NM_030711) promoter-TSS (NM_030711) -41 NM_030711 80898 Mm.83526 NM_030711 ENSMUSG00000021583 Erap1 Arts1|ERAAP|PILSA|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding common_peak2_360_3047_0.237277200920715_11.6922857879537_10.0613036336553 chr1 74389371 74393472 + 10.0613036336553 NA promoter-TSS (NM_153088) promoter-TSS (NM_153088) -188 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding common_peak1_163_1738_-0.349374329868448_10.5893550523724_10.0608299644116 chr1 166015457 166017968 + 10.0608299644116 NA Intergenic B1_Mur2|SINE|Alu -14078 NM_011137 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding common_peak1_49_510_-0.684551977614881_8.65490349213018_10.057361512557-2 chr6 99257207 99258192 + 10.057361512557 NA intron (NM_001197321, intron 2 of 17) intron (NM_001197321, intron 2 of 17) 8816 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_49_510_-0.684551977614881_8.65490349213018_10.057361512557 chr19 53188234 53189288 + 10.057361512557 NA intron (NM_013758, intron 1 of 15) B1_Mur1|SINE|Alu 44764 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak2_267_2042_0.287294833789208_11.1401209056278_10.0565006476702 chr1 138617265 138620425 + 10.0565006476702 NA intron (NM_001311148, intron 1 of 7) intron (NM_001311148, intron 1 of 7) 912 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak2_95_983_-0.475514414874432_9.70475729790202_10.055566689021 chr12 75668757 75670645 + 10.055566689021 NA promoter-TSS (NM_028203) promoter-TSS (NM_028203) -164 NM_028203 72338 Mm.341719 NM_028203 ENSMUSG00000045690 Wdr89 2600001A11Rik WD repeat domain 89 protein-coding common_peak2_239_2643_-0.28001309535092_11.2284999138322_10.0553830334807 chr13 55013412 55020112 + 10.0553830334807 NA intron (NM_001206392, intron 1 of 17) intron (NM_001206392, intron 1 of 17) 4057 NM_001206390 212032 Mm.267479 NM_001033245 ENSMUSG00000025877 Hk3 HK III|HK-III hexokinase 3 protein-coding common_peak2_57_218_0.800488566097751_8.17503134265005_10.0552621254061 chr4 147936221 147937113 + 10.0552621254061 NA exon (NM_011122, exon 1 of 19) exon (NM_011122, exon 1 of 19) 109 NM_011122 18822 Mm.23951 NM_011122 ENSMUSG00000019055 Plod1 2410042F05Rik|AI854890|AV007929|Lh1|Plod procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 protein-coding common_peak1_303_2421_0.264830298447986_11.3743982989183_10.0548335271907 chr11 116842101 116844250 + 10.0548335271907 NA promoter-TSS (NM_028865) promoter-TSS (NM_028865) 274 NM_033398 107817 Mm.481684 NM_033398 ENSMUSG00000056962 Jmjd6 5730436I23Rik|D11Ertd195e|PSR|PtdSerR|Ptdsr|mKIAA0585 jumonji domain containing 6 protein-coding common_peak1_67_691_-0.577867344289842_9.1456945554918_10.05215691707 chr19 5648433 5649599 + 10.05215691707 NA TTS (NM_009045) TTS (NM_009045) 11526 NM_009045 19697 Mm.249966 NM_009045 ENSMUSG00000024927 Rela p65 v-rel reticuloendotheliosis viral oncogene homolog A (avian) protein-coding common_peak1_66_680_-0.580967287862348_9.1210273440809_10.0510183579333 chr12 36036352 36037582 + 10.0510183579333 NA intron (NM_025359, intron 1 of 5) intron (NM_025359, intron 1 of 5) 5511 NM_025359 66109 Mm.254663 NM_025359 ENSMUSG00000020577 Tspan13 1100001I23Rik|NET-6|Tm4sf13 tetraspanin 13 protein-coding common_peak1_307_2464_0.262574231880505_11.3986590472055_10.050229650977 chr11 43383372 43386260 + 10.050229650977 NA Intergenic Intergenic -10355 NR_029558 387164 NR_029558 ENSMUSG00000065601 Mir146 Mirn146|miR-146a|mmu-mir-146 microRNA 146 ncRNA common_peak1_41_127_1.00408695498485_7.50204347749243_10.0492434310501 chr4 119733718 119734342 + 10.0492434310501 NA Intergenic CpG -75085 NM_008191 14916 Mm.278 NM_008191 ENSMUSG00000032978 Guca2b AV066530|Gcap2|Ugn guanylate cyclase activator 2b (retina) protein-coding common_peak1_49_171_0.886362748620643_7.86944612901242_10.0468247960084 chr4 63595351 63596263 + 10.0468247960084 NA Intergenic Intergenic 4957 NR_028584 670833 Mm.32213 NR_028583 ENSMUSG00000084782 Gm11213 OTTMUSG00000000252 predicted gene 11213 ncRNA common_peak1_309_2486_0.261209310582077_11.4107954475079_10.0466749025666 chr18 36280052 36281800 + 10.0466749025666 NA promoter-TSS (NM_008989) promoter-TSS (NM_008989) -236 NM_008989 19290 Mm.231802 NM_008989 ENSMUSG00000043991 Pura CAGER-1|Pur-alpha|ssCRE-BP purine rich element binding protein A protein-coding unique_peak2_3_74_-2.38579004974342_5.03592366562417_10.0461342244671-2 chr6 60890459 60891098 + 10.0461342244671 NA Intergenic MMVL30-int|LTR|ERV1 -53539 NM_027613 70945 Mm.389770 NM_027613 ENSMUSG00000054641 Mmrn1 4921530G03Rik|Emilin4|Mmrn multimerin 1 protein-coding unique_peak2_3_74_-2.38579004974342_5.03592366562417_10.0461342244671 chr10 62600318 62600813 + 10.0461342244671 NA intron (NM_019553, intron 1 of 14) B2_Mm1t|SINE|B2 1733 NM_019553 56200 Mm.413275 NM_019553 ENSMUSG00000020075 Ddx21 AI255159|AL022742|D10Ertd645e|D10Wsu42e DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 protein-coding common_peak1_194_1321_0.352542574978488_10.5447777489969_10.0452286923778 chr11 115603101 115604851 + 10.0452286923778 NA promoter-TSS (NM_001252067) promoter-TSS (NM_001252067) -60 NM_173048 260302 Mm.119479 NM_173048 ENSMUSG00000020740 Gga3 C230037M19Rik|mKIAA0154 golgi associated, gamma adaptin ear containing, ARF binding protein 3 protein-coding common_peak2_171_1830_-0.339464283170674_10.668683934212_10.0434861124172 chr14 19984439 19987772 + 10.0434861124172 NA Intergenic Intergenic -8856 NM_001285909 14702 Mm.41737 NM_010315 ENSMUSG00000043004 Gng2 - guanine nucleotide binding protein (G protein), gamma 2 protein-coding common_peak1_542_5221_0.182955089316803_12.4418642869712_10.0430422362535 chr11 49246240 49251465 + 10.0430422362535 NA intron (NM_001110149, intron 1 of 1) intron (NM_001110149, intron 1 of 1) 1375 NM_001110149 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak1_54_200_0.830239327206987_8.06617135478242_10.0419461535836 chr10 71239111 71239810 + 10.0419461535836 NA Intergenic B1_Mur1|SINE|Alu -1416 NM_009360 21780 Mm.229292 NM_009360 ENSMUSG00000003923 Tfam AI661103|Hmgts|mtTFA|tsHMG transcription factor A, mitochondrial protein-coding unique_peak2_13_168_-1.34092699745061_6.73041593755688_10.0411024537419 chr9 116481008 116482312 + 10.0411024537419 NA Intergenic Intergenic -306297 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_51_530_-0.670534494976865_8.71730080331572_10.040603551061 chr14 64627420 64628428 + 10.040603551061 NA Intergenic Intergenic -24607 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak2_66_275_0.722019243371555_8.46953407846395_10.0389152247457 chr14 76010090 76011365 + 10.0389152247457 NA exon (NM_026816, exon 1 of 8) exon (NM_026816, exon 1 of 8) 138 NM_026816 68705 Mm.20415 NM_026816 ENSMUSG00000067995 Gtf2f2 1110031C13Rik|AI326315 general transcription factor IIF, polypeptide 2 protein-coding common_peak2_155_1646_-0.359456767745781_10.5058964558535_10.0377817488576 chr8 95082712 95086471 + 10.0377817488576 NA intron (NM_028805, intron 2 of 19) intron (NM_028805, intron 2 of 19) 3390 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding common_peak1_28_307_-0.918123226182334_7.80772492760373_10.0371955172893 chr8 85083199 85083623 + 10.0371955172893 NA exon (NM_010764, exon 1 of 24) exon (NM_010764, exon 1 of 24) 142 NM_010764 17159 Mm.4219 NM_010764 ENSMUSG00000005142 Man2b1 AW107687|LAMAN mannosidase 2, alpha B1 protein-coding common_peak1_38_111_1.06558852755026_7.34014918583273_10.0361519787503 chr15 103252028 103252826 + 10.0361519787503 NA promoter-TSS (NM_001302340) promoter-TSS (NM_001302340) 383 NM_001302339 18022 Mm.457989 NM_008685 ENSMUSG00000058794 Nfe2 NF-E2|NF-E2/P45|p45|p45NFE2|p45nf-e2 nuclear factor, erythroid derived 2 protein-coding common_peak1_120_1253_-0.415754788166591_10.0844442387187_10.0349655573543 chr2 26963521 26964931 + 10.0349655573543 NA exon (NM_207234, exon 1 of 8) exon (NM_207234, exon 1 of 8) 160 NM_207234 227656 Mm.291874 NM_207234 ENSMUSG00000052406 Rexo4 Gm111|Rex4|Xpmc2h REX4, 3'-5' exonuclease protein-coding common_peak1_630_6350_0.166365708869639_12.7159509091636_10.0339683944398 chr1 135129835 135135854 + 10.0339683944398 NA promoter-TSS (NM_007955) promoter-TSS (NM_007955) 119 NM_177081 320139 Mm.258388 NM_177081 ENSMUSG00000031506 Ptpn7 BPTP-4|C920001D21Rik|HEPTP|LC-PTP|LPTP protein tyrosine phosphatase, non-receptor type 7 protein-coding common_peak2_104_546_0.530183207884262_9.36048862673469_10.0322611645701 chr2 76674590 76676123 + 10.0322611645701 NA promoter-TSS (NM_031256) promoter-TSS (NM_031256) 41 NM_031256 83435 Mm.41636 NM_031256 ENSMUSG00000002733 Plekha3 FAPP1 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3 protein-coding common_peak1_30_326_-0.886464620763777_7.90991451511619_10.030627099703 chr15 96708199 96708787 + 10.030627099703 NA Intergenic Intergenic -8795 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding unique_peak2_30_326_-0.886464620763777_7.90991451511619_10.030627099703 chr19 21031218 21033058 + 10.030627099703 NA Intergenic Intergenic -72572 NR_126458 75354 Mm.243873 NR_126458 4930554I06Rik - RIKEN cDNA 4930554I06 gene ncRNA common_peak2_50_177_0.871937346161059_7.91170210404693_10.0306270997029 chr2 65192862 65194073 + 10.0306270997029 NA intron (NM_177025, intron 1 of 13) intron (NM_177025, intron 1 of 13) 45159 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak1_101_1046_-0.457762638616996_9.80316440762231_10.0283378766771 chr9 110644175 110645356 + 10.0283378766771 NA intron (NM_183276, intron 1 of 53) intron (NM_183276, intron 1 of 53) -8650 NR_106186 102466885 NR_106186 ENSMUSG00000099275 Mir8107 Gm27455|mmu-mir-8107 microRNA 8107 ncRNA common_peak1_89_434_0.587919358014897_9.05883126974354_10.0278171365448 chr2 104027785 104028723 + 10.0278171365448 NA intron (NM_020593, intron 1 of 9) CpG 455 NM_212433 57443 Mm.143768 NM_020593 ENSMUSG00000027180 Fbxo3 1200002G09Rik|1700026K02Rik|AI046358|Fba F-box protein 3 protein-coding common_peak2_155_967_0.407304834705979_10.1225156546276_10.0272019003369 chr13 91460119 91462531 + 10.0272019003369 NA intron (NM_024186, intron 1 of 15) CpG 228 NM_024186 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding unique_peak2_43_451_-0.733768908534881_8.45329450814775_10.0250902010387 chr17 26166564 26169017 + 10.0250902010387 NA intron (NM_009733, intron 2 of 10) B1_Mus1|SINE|Alu 29104 NM_001159598 12005 Mm.23684 NM_009733 ENSMUSG00000024182 Axin1 AI316800|Axin|Fu|Kb|Ki|fused|kinky|knobbly axin 1 protein-coding common_peak1_238_2629_-0.279742570087086_11.2209757991361_10.0241255621645 chr8 86836365 86838825 + 10.0241255621645 NA Intergenic T-rich|Low_complexity|Low_complexity 47663 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_70_721_-0.562695481040153_9.21450728636709_10.0203846403353 chr19 37553512 37554811 + 10.0203846403353 NA intron (NM_175353, intron 1 of 21) intron (NM_175353, intron 1 of 21) 3743 NM_175353 107371 Mm.24865 NM_175353 ENSMUSG00000053799 Exoc6 4833405E05Rik|AW413330|C430002C19|Sec15|Sec15l1|hbd|msec15 exocyst complex component 6 protein-coding common_peak1_32_82_1.20228051631396_6.9761796895039_10.0199252095852 chr8 126882368 126883070 + 10.0199252095852 NA Intergenic ORR1A2|LTR|ERVL-MaLR 63202 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak2_108_577_0.516816553028958_9.43333395901516_10.0192251562303 chr8 88634714 88636801 + 10.0192251562303 NA intron (NM_027840, intron 1 of 3) intron (NM_027840, intron 1 of 3) 371 NM_027840 71607 Mm.270607 NM_027840 ENSMUSG00000031662 Snx20 9130017C17Rik sorting nexin 20 protein-coding common_peak2_139_829_0.437702810661959_9.91581893156527_10.0141700383562 chr1 161968263 161970137 + 10.0141700383562 NA promoter-TSS (NM_001039045) promoter-TSS (NM_001039045) 12 NM_026078 67292 Mm.45106 NM_026078 ENSMUSG00000026698 Pigc 3110030E07Rik|AW212108 phosphatidylinositol glycan anchor biosynthesis, class C protein-coding common_peak2_101_523_0.540860086776362_9.30385304492563_10.0101268097421 chr15 25842290 25844209 + 10.0101268097421 NA promoter-TSS (NM_001034851) promoter-TSS (NM_001034851) -49 NM_001034851 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Fam134b 1810015C04Rik|AU015349 family with sequence similarity 134, member B protein-coding common_peak2_1051_12272_0.120465319038967_13.6434329821287_10.0099483289437 chr9 21124710 21138127 + 10.0099483289437 NA promoter-TSS (NM_018793) promoter-TSS (NM_018793) -143 NM_001205312 54721 Mm.20249 NM_018793 ENSMUSG00000032175 Tyk2 JTK1 tyrosine kinase 2 protein-coding common_peak2_39_412_-0.772251432602314_8.30387225511829_10.0077713287527 chr4 88759705 88760851 + 10.0077713287527 NA promoter-TSS (NM_001085531) promoter-TSS (NM_001085531) -496 NM_001085531 545645 Mm.489553 NM_001085531 ENSMUSG00000100505 Gm13283 EG545645|OTTMUSG00000011280 predicted gene 13283 protein-coding unique_peak2_39_412_-0.772251432602314_8.30387225511829_10.0077713287527 chr11 62663499 62665084 + 10.0077713287527 NA intron (NM_175002, intron 1 of 1) intron (NM_175002, intron 1 of 1) 15627 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding common_peak1_62_639_-0.600318934935579_9.02176862741957_10.00673574487-2 chr5 149184632 149185480 + 10.00673574487 NA intron (NM_001115151, intron 1 of 8) CpG 496 NM_001115149 231915 Mm.29402 NM_001013378 ENSMUSG00000041264 Uspl1 E430026A01Rik ubiquitin specific peptidase like 1 protein-coding common_peak1_62_639_-0.600318934935579_9.02176862741957_10.00673574487 chr14 73048268 73049210 + 10.00673574487 NA intron (NM_133720, intron 1 of 5) intron (NM_133720, intron 1 of 5) 375 NM_133720 70086 Mm.158324 NM_133720 ENSMUSG00000033470 Cysltr2 2300001H05Rik|CYSLT2R|Cltr2|Cyslt2 cysteinyl leukotriene receptor 2 protein-coding common_peak1_81_834_-0.517576811109633_9.4468439818066_10.0067097072528 chr1 86503716 86505209 + 10.0067097072528 NA Intergenic CpG -22274 NM_008972 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak1_81_834_-0.517576811109633_9.4468439818066_10.0067097072528-2 chr13 21974336 21975136 + 10.0067097072528 NA Intergenic Intergenic -6445 NM_001162928 195236 Mm.204664 NM_001162928 ENSMUSG00000016982 Pom121l2 Gm24 POM121 membrane glycoprotein-like 2 (rat) protein-coding common_peak2_45_470_-0.714510134332919_8.52232818244632_10.0032535241858 chr9 57439267 57440344 + 10.0032535241858 NA intron (NM_176831, intron 1 of 6) intron (NM_176831, intron 1 of 6) 309 NM_176831 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak1_213_1503_0.330993878864492_10.7200857911099_10.0009465623604 chr13 44729827 44732711 + 10.0009465623604 NA promoter-TSS (NM_001205043) promoter-TSS (NM_001205043) -2 NM_001205043 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding unique_peak1_13_11_2.47498993811041_4.82245746977636_10.0003219652929-3 chr9 89267414 89267802 + 10.0003219652929 NA Intergenic Intergenic 56418 NM_026829 107885 Mm.486274 NM_026829 ENSMUSG00000066442 Mthfs 1110034I12Rik|2310020H23Rik|AI119695 5, 10-methenyltetrahydrofolate synthetase protein-coding unique_peak1_13_11_2.47498993811041_4.82245746977636_10.0003219652929 chr16 33829392 33829788 + 10.0003219652929 NA promoter-TSS (NM_010580) promoter-TSS (NM_010580) -75 NM_010580 16419 Mm.6424 NM_010580 ENSMUSG00000022817 Itgb5 AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5 integrin beta 5 protein-coding unique_peak1_13_11_2.47498993811041_4.82245746977636_10.0003219652929-2 chr5 110337026 110337349 + 10.0003219652929 NA exon (NM_011132, exon 49 of 49) exon (NM_011132, exon 49 of 49) 5848 NM_001310700 231602 Mm.55948 NM_153400 ENSMUSG00000029503 P2rx2 P2X2a|P2x2 purinergic receptor P2X, ligand-gated ion channel, 2 protein-coding common_peak1_28_64_1.32629550148411_6.68551556377051_9.9990672813627 chr13 41583643 41584224 + 9.9990672813627 NA Intergenic L1MEb|LINE|L1 -22283 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak2_115_1198_-0.425728006528942_10.0147519401498_9.99608912261292 chr8 117073641 117075632 + 9.99608912261292 NA intron (NM_029686, intron 4 of 42) intron (NM_029686, intron 4 of 42) 7813 NM_029686 76645 Mm.159753 NM_029686 ENSMUSG00000034416 Pkd1l2 1700126L06Rik polycystic kidney disease 1 like 2 protein-coding common_peak2_68_700_-0.570675313763829_9.16793297712871_9.99427538773117 chr17 30335240 30337703 + 9.99427538773117 NA intron (NM_172618, intron 6 of 11) intron (NM_172618, intron 6 of 11) 59709 NR_030688 623169 Mm.440508 NR_030688 Gm6402 EG623169 ribosomal protein S17 pseudogene pseudo common_peak1_68_700_-0.570675313763829_9.16793297712871_9.99427538773117 chr15 103239075 103239999 + 9.99427538773117 NA promoter-TSS (NR_104427) promoter-TSS (NR_104427) 279 NM_001076789 12419 Mm.262059 NM_007626 ENSMUSG00000009575 Cbx5 2610029O15Rik|C75991|HP1|Hp1a|Hp1alpha chromobox 5 protein-coding common_peak2_160_1011_0.399003338664668_10.1824952440266_9.99268845579537 chr2 91264322 91266244 + 9.99268845579537 NA TTS (NM_028733) TTS (NM_028733) 168 NM_023854 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding common_peak2_47_489_-0.696250159724119_8.58851285914051_9.99228700372041 chr19 5601677 5602728 + 9.99228700372041 NA TTS (NM_178637) TTS (NM_178637) 329 NM_026616 68209 Mm.246200 NM_026616 ENSMUSG00000024925 Rnaseh2c 1500026D16Rik|AYP1 ribonuclease H2, subunit C protein-coding common_peak1_137_813_0.440322647166903_9.8890463078497_9.99187222365638 chr16 10976377 10977985 + 9.99187222365638 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 15940 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak2_84_866_-0.508246335369343_9.50576501553716_9.99153378844461 chr13 21974091 21975313 + 9.99153378844461 NA Intergenic Intergenic -6479 NM_001162928 195236 Mm.204664 NM_001162928 ENSMUSG00000016982 Pom121l2 Gm24 POM121 membrane glycoprotein-like 2 (rat) protein-coding common_peak1_84_866_-0.508246335369343_9.50576501553716_9.99153378844461 chr7 19228226 19228720 + 9.99153378844461 NA promoter-TSS (NM_207525) promoter-TSS (NM_207525) 84 NM_207525 403187 Mm.239583 NM_207525 ENSMUSG00000052214 Opa3 D630048P19Rik|Gm1425|Gm472 optic atrophy 3 protein-coding common_peak1_44_143_0.95625363612232_7.64805181950347_9.99045993087508 chr11 114884541 114885316 + 9.99045993087508 NA Intergenic Intergenic -5113 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding common_peak1_25_279_-0.973861772304035_7.64235213079295_9.99045993087508 chr6 129626931 129627531 + 9.99045993087508 NA Intergenic Intergenic -3367 NM_001286018 27007 Mm.8217 NM_033078 ENSMUSG00000030149 Klrk1 D6H12S2489E|NKG2-D|Nkg2d killer cell lectin-like receptor subfamily K, member 1 protein-coding common_peak2_537_5160_0.183536517471314_12.4252031740197_9.98966427807574 chr19 57129854 57134415 + 9.98966427807574 NA intron (NM_001290813, intron 6 of 20) intron (NM_001290813, intron 6 of 20) -13110 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_36_383_-0.805178849509746_8.18237307596628_9.98889837140131 chr13 41249825 41250377 + 9.98889837140131 NA 5' UTR (NM_001135577, exon 1 of 2) 5' UTR (NM_001135577, exon 1 of 2) 257 NM_001135577 108934 Mm.38578 NM_001135577 ENSMUSG00000091264 Smim13 2900036K02Rik small integral membrane protein 13 protein-coding common_peak1_14_177_-1.29368930955505_6.82888877618887_9.98736367848302 chr9 61706995 61707392 + 9.98736367848302 NA Intergenic Intergenic 207317 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_30_73_1.25722883910536_6.83806778518163_9.98736367848297 chr1 157412002 157412615 + 9.98736367848297 NA promoter-TSS (NR_027984) promoter-TSS (NR_027984) -44 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA common_peak2_141_1486_-0.378417075019046_10.3489803945429_9.98562284757674 chr18 6240516 6242205 + 9.98562284757674 NA 5' UTR (NM_008448, exon 1 of 26) 5' UTR (NM_008448, exon 1 of 26) 164 NM_008448 16573 Mm.223744 NM_008448 ENSMUSG00000006740 Kif5b AL022807|Khc|Khcs|Kns1|Ukhc kinesin family member 5B protein-coding common_peak2_372_4340_-0.215019683291279_11.9763018656072_9.98481821606672 chr7 19815359 19820671 + 9.98481821606672 NA intron (NM_033601, intron 2 of 8) intron (NM_033601, intron 2 of 8) 4740 NM_033601 12051 Mm.439658 NM_033601 ENSMUSG00000053175 Bcl3 AI528691|Bcl-3 B cell leukemia/lymphoma 3 protein-coding common_peak1_131_1374_-0.394671333265793_10.2278802366665_9.98434661168111 chr15 85652897 85654648 + 9.98434661168111 NA Intergenic Intergenic -50001 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak1_46_480_-0.706761996344024_8.55651208559803_9.98374584669876 chr11 121673428 121674179 + 9.98374584669876 NA promoter-TSS (NM_178664) promoter-TSS (NM_178664) -652 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak1_505_4762_0.190799695043696_12.3130546808859_9.98103787792942 chr11 102316559 102320552 + 9.98103787792942 NA intron (NM_001302954, intron 1 of 19) CpG-2669 541 NM_001302955 21429 Mm.2845 NM_011551 ENSMUSG00000020923 Ubtf A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1 upstream binding transcription factor, RNA polymerase I protein-coding common_peak2_120_1252_-0.414603854686412_10.0838687719787_9.97709743695988 chr8 25623778 25626778 + 9.97709743695988 NA intron (NM_001308482, intron 1 of 7) intron (NM_001308482, intron 1 of 7) -15299 NM_001081269 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Whsc1l1 6720429E03|A530023P05|AI528490|NSD3|WHISTLE Wolf-Hirschhorn syndrome candidate 1-like 1 (human) protein-coding common_peak2_264_2013_0.28799938431465_11.1198476601641_9.97588492830122 chr12 69183116 69185359 + 9.97588492830122 NA promoter-TSS (NM_025589) promoter-TSS (NM_025589) 79 NM_146035 217664 Mm.206642 NM_146035 ENSMUSG00000043998 Mgat2 AA407964|CDGS2|GLCNACTII|GNT-II|GNT2 mannoside acetylglucosaminyltransferase 2 protein-coding common_peak1_264_2013_0.28799938431465_11.1198476601641_9.97588492830122 chr1 138617323 138620180 + 9.97588492830122 NA intron (NM_001311148, intron 1 of 7) intron (NM_001311148, intron 1 of 7) 1006 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak1_67_690_-0.575781017041376_9.14465139186757_9.97435720012044 chr9 115611866 115613216 + 9.97435720012044 NA Intergenic MTEb|LTR|ERVL-MaLR 230722 NR_130329 100316675 NR_130329 ENSMUSG00000080409 Mir467h Mirn467h|mmu-mir-467h microRNA 467h ncRNA common_peak1_374_3208_0.230347220886181_11.7630816847249_9.97284164316203 chr1 134059605 134062432 + 9.97284164316203 NA Intergenic Intergenic 18137 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak2_372_3185_0.231261472436293_11.7531612877435_9.97013717167659 chr9 108305036 108309218 + 9.97013717167659 NA promoter-TSS (NM_133986) promoter-TSS (NM_133986) 330 NM_001313962 11848 Mm.757 NM_016802 ENSMUSG00000007815 Rhoa Arha|Arha1|Arha2 ras homolog family member A protein-coding common_peak2_127_1329_-0.401120333704316_10.1766503635364_9.96992579042286 chr17 86121709 86124729 + 9.96992579042286 NA intron (NM_030133, intron 7 of 20) intron (NM_030133, intron 7 of 20) 21956 NM_030133 78586 Mm.146236 NM_030133 ENSMUSG00000024135 Srbd1 AI461933|C85414|D530025C17Rik S1 RNA binding domain 1 protein-coding common_peak1_100_516_0.542827723290523_9.2854343319602_9.96915917384472 chr14 55744985 55746605 + 9.96915917384472 NA promoter-TSS (NM_026819) promoter-TSS (NM_026819) 102 NM_026403 67842 Mm.180338 NM_026403 ENSMUSG00000019297 Nop9 2610027L16Rik NOP9 nucleolar protein protein-coding common_peak1_54_558_-0.645413454457275_8.80399774561455_9.96761111662853 chr14 52278548 52279439 + 9.96761111662853 NA promoter-TSS (NM_023434) promoter-TSS (NM_023434) -153 NM_023434 268741 Mm.246237 NM_023434 ENSMUSG00000016831 Tox4 5730589K01Rik|A630040M18|AA410149|LCP1 TOX high mobility group box family member 4 protein-coding common_peak1_71_730_-0.555817611707058_9.23581879009891_9.96736929773398 chr2 65181870 65182920 + 9.96736929773398 NA intron (NM_177025, intron 1 of 13) intron (NM_177025, intron 1 of 13) 56231 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak2_230_1670_0.314360038865162_10.8636760374938_9.96456522970073 chr2 35460183 35464827 + 9.96456522970073 NA Intergenic CpG -1056 NM_001145821 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding unique_peak2_24_269_-0.990800404914448_7.58141539459361_9.96354869663294 chr4 88805209 88806268 + 9.96354869663294 NA promoter-TSS (NM_001161609).3 promoter-TSS (NM_001161609).3 207 NM_001243167 668208 Mm.487241 NM_001243167 ENSMUSG00000070908 Gm13288 OTTMUSG00000011289 predicted gene 13288 protein-coding common_peak1_20_232_-1.08671150085578_7.32083039422639_9.96276810364088-2 chrX 48256309 48256643 + 9.96276810364088 NA promoter-TSS (NM_028276) promoter-TSS (NM_028276) -458 NM_028276 72554 Mm.336045 NM_028276 ENSMUSG00000063785 Utp14a 2700066J21Rik|JsdX|NY-CO-16|SDCCAG16|T25628|mKIAA0266 UTP14A small subunit processome component protein-coding unique_peak2_20_232_-1.08671150085578_7.32083039422639_9.96276810364088 chr10 20122988 20124300 + 9.96276810364088 NA intron (NM_008580, intron 23 of 29) intron (NM_008580, intron 23 of 29) -25276 NM_008635 17761 Mm.20928 NM_008635 ENSMUSG00000019996 Map7 E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste microtubule-associated protein 7 protein-coding common_peak1_20_232_-1.08671150085578_7.32083039422639_9.96276810364088 chr6 120977626 120978134 + 9.96276810364088 NA intron (NM_001270475, intron 20 of 31) intron (NM_001270475, intron 20 of 31) -61060 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding unique_peak2_12_158_-1.38407402182978_6.62084594436947_9.96227757054542 chr17 47410256 47410846 + 9.96227757054542 NA Intergenic CpG 4160 NM_001172091 75462 Mm.46129 NM_029296 ENSMUSG00000047150 1700001C19Rik - RIKEN cDNA 1700001C19 gene protein-coding unique_peak2_15_186_-1.25064119676247_6.9215738615064_9.9557700898423 chr12 113156315 113157073 + 9.9557700898423 NA exon (NM_134041, exon 2 of 8) exon (NM_134041, exon 2 of 8) 273 NM_134041 104732 Mm.87616 NM_134041 ENSMUSG00000037466 4930427A07Rik AA536649|mFLJ00116 RIKEN cDNA 4930427A07 gene protein-coding common_peak2_65_669_-0.584085026497899_9.09597477209619_9.95479960797535 chr7 127344896 127346683 + 9.95479960797535 NA promoter-TSS (NM_146202) promoter-TSS (NM_146202) -475 NM_146202 233890 Mm.23031 NM_146202 ENSMUSG00000047371 Zfp768 BC026432|Znf768 zinc finger protein 768 protein-coding common_peak1_39_117_1.03510348945529_7.40019479408949_9.95295579098201 chr10 39493216 39494102 + 9.95295579098201 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) -119275 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak1_39_117_1.03510348945529_7.40019479408949_9.95295579098201-2 chr8 91065346 91065876 + 9.95295579098201 NA Intergenic Intergenic -4446 NM_001282001 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 retinoblastoma-like 2 protein-coding common_peak1_39_117_1.03510348945529_7.40019479408949_9.95295579098201-3 chr9 61627173 61627838 + 9.95295579098201 NA Intergenic Intergenic 255139 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak2_51_529_-0.667814993623274_8.71594105263893_9.95196997312974 chr5 148376404 148378658 + 9.95196997312974 NA intron (NM_007513, intron 1 of 12) intron (NM_007513, intron 1 of 12) 15284 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak2_68_289_0.70268623023186_8.53125220513087_9.9512328054795 chr11 54962000 54963637 + 9.9512328054795 NA intron (NM_001199275, intron 1 of 18) intron (NM_001199275, intron 1 of 18) 122 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak2_38_401_-0.778108241571068_8.26199757039339_9.95116573655431 chr4 151933506 151934539 + 9.95116573655431 NA intron (NM_172704, intron 1 of 15) CpG 302 NM_172704 230935 Mm.21353 NM_172704 ENSMUSG00000039768 Dnajc11 E030019A03Rik DnaJ heat shock protein family (Hsp40) member C11 protein-coding common_peak2_38_401_-0.778108241571068_8.26199757039339_9.95116573655431-2 chr7 105553854 105555117 + 9.95116573655431 NA 5' UTR (NM_011421, exon 1 of 6) 5' UTR (NM_011421, exon 1 of 6) 125 NM_011421 20597 Mm.4628 NM_011421 ENSMUSG00000037049 Smpd1 A-SMase|ASM|Zn-SMase|aSMase sphingomyelin phosphodiesterase 1, acid lysosomal protein-coding common_peak2_144_873_0.42527943189029_9.98412918544575_9.94698771886059 chr11 88716485 88719196 + 9.94698771886059 NA promoter-TSS (NR_038058) promoter-TSS (NR_038058) 389 NM_054043 76626 Mm.400451 NM_054043 ENSMUSG00000069769 Msi2 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h musashi RNA-binding protein 2 protein-coding common_peak1_77_350_0.644228540489657_8.77744149054939_9.94606585510746 chr15 101253985 101254986 + 9.94606585510746 NA Intergenic Intergenic -12361 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding common_peak1_17_204_-1.17479473763278_7.09208273068906_9.94470485908318 chr9 124040576 124041057 + 9.94470485908318 NA Intergenic Intergenic 18845 NM_009914 12771 Mm.57050 NM_009914 ENSMUSG00000035448 Ccr3 CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3 chemokine (C-C motif) receptor 3 protein-coding common_peak1_23_259_-1.00859234493636_7.51807164056027_9.94467030838344 chr7 28383308 28383672 + 9.94467030838344 NA Intergenic B1F|SINE|Alu -4262 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding common_peak2_23_259_-1.00859234493636_7.51807164056027_9.94467030838344 chr8 4165448 4166524 + 9.94467030838344 NA promoter-TSS (NM_001039578) promoter-TSS (NM_001039578) -581 NM_001039578 213027 Mm.437106 NM_153536 ENSMUSG00000011832 Evi5l 1700084G18Rik|2310039H16Rik|3110007G05Rik|B130050I23Rik ecotropic viral integration site 5 like protein-coding common_peak1_133_1395_-0.389927214873573_10.2521196187729_9.94280775027545 chr7 105736644 105738038 + 9.94280775027545 NA promoter-TSS (NM_133951) promoter-TSS (NM_133951) 44 NM_133951 101867 Mm.231400 NM_025897 ENSMUSG00000030888 Rrp8 1500003O22Rik|2900001K19Rik|AW538116 ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding unique_peak2_35_372_-0.811734147196214_8.13716474665713_9.94262090274883 chr3 129535038 129537056 + 9.94262090274883 NA intron (NM_130450, intron 2 of 4) intron (NM_130450, intron 2 of 4) 3661 NM_130450 170439 Mm.314113 NM_130450 ENSMUSG00000041220 Elovl6 C77826|FAE|LCE ELOVL family member 6, elongation of long chain fatty acids (yeast) protein-coding unique_peak2_16_195_-1.21117358314104_7.00912305254469_9.94253790716324 chr7 125634899 125636679 + 9.94253790716324 NA Intergenic Intergenic 32360 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding unique_peak2_5_94_-2.00930476261156_5.56520322702517_9.93958066134116 chr6 130227485 130228238 + 9.93958066134116 NA intron (NM_001110323, intron 4 of 7) intron (NM_001110323, intron 4 of 7) 3826 NM_014194 16638 Mm.441781 NM_014194 ENSMUSG00000067599 Klra7 LGL-1|Ly-49G.1|Ly-49G.2|Ly-49G.3|Ly49G.4|Ly49g|Ly49g1|Ly49g2 killer cell lectin-like receptor, subfamily A, member 7 protein-coding common_peak2_152_1610_-0.361935485425828_10.4727730359937_9.93499769995188 chr13 23554319 23556867 + 9.93499769995188 NA exon (NM_145713, exon 1 of 1) exon (NM_145713, exon 1 of 1) 561 NM_145713 14957 Mm.247046 NM_145713 ENSMUSG00000052565 Hist1h1d H1.3|H1D|H1f3|H1s-4 histone cluster 1, H1d protein-coding common_peak1_40_122_1.01892875972619_7.45197888520233_9.93497468897665 chr16 49938321 49938958 + 9.93497468897665 NA Intergenic Intergenic -41821 NR_045001 628951 Mm.428032 NR_045001 Gm6936 - predicted gene 6936 ncRNA common_peak1_47_160_0.909470901163835_7.78565232869653_9.9335892835008 chr12 73595722 73596650 + 9.9335892835008 NA intron (NM_001313977, intron 2 of 14) intron (NM_001313977, intron 2 of 14) 11390 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_199_1370_0.344839269916227_10.5934324907373_9.93124946668466 chr11 23665204 23666862 + 9.93124946668466 NA promoter-TSS (NM_023651) promoter-TSS (NM_023651) 57 NM_028304 74467 Mm.29536 NM_028304 ENSMUSG00000020280 Pus10 2810013G11Rik|4933435A13Rik|AU014648|C77560|Ccdc139 pseudouridylate synthase 10 protein-coding common_peak2_199_1370_0.344839269916227_10.5934324907373_9.93124946668466 chr13 101537428 101542178 + 9.93124946668466 NA Intergenic Intergenic -142223 NR_046187 78136 Mm.399065 NR_046187 4922502H24Rik - RIKEN cDNA 4922502H24 gene ncRNA common_peak2_375_4378_-0.213417713467564_11.9896768777189_9.9276338466299 chr12 112856590 112862914 + 9.9276338466299 NA intron (NM_019925, intron 1 of 2) (CA)n|Simple_repeat|Simple_repeat 1164 NM_019925 56696 Mm.20455 NM_019925 ENSMUSG00000021298 Gpr132 G2a G protein-coupled receptor 132 protein-coding common_peak1_62_638_-0.598062960995213_9.02064064044939_9.9260555487556 chr7 114479969 114480864 + 9.9260555487556 NA intron (NM_011055, intron 1 of 15) intron (NM_011055, intron 1 of 15) 65162 NM_011055 18576 Mm.430730 NM_011055 ENSMUSG00000030671 Pde3b 9830102A01Rik|AI847709 phosphodiesterase 3B, cGMP-inhibited protein-coding common_peak2_403_4752_-0.204549870324167_12.1123477511403_9.92567801831195 chr2 126495129 126503166 + 9.92567801831195 NA Intergenic Intergenic -7594 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding unique_peak1_22_40_1.58090879947543_6.1480064043558_9.92306813121219-3 chr13 93921091 93921643 + 9.92306813121219 NA intron (NM_009712, intron 6 of 7) intron (NM_009712, intron 6 of 7) 130590 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA unique_peak1_22_40_1.58090879947543_6.1480064043558_9.92306813121219 chr10 95266156 95266671 + 9.92306813121219 NA intron (NM_009950, intron 2 of 2) intron (NM_009950, intron 2 of 2) 57684 NM_009950 12905 Mm.473739 NM_009950 ENSMUSG00000045867 Cradd RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding common_peak1_22_40_1.58090879947543_6.1480064043558_9.92306813121219 chr13 62465785 62466292 + 9.92306813121219 NA intron (NM_001136496, intron 1 of 2) intron (NM_001136496, intron 1 of 2) 774 NM_178875 71508 Mm.442497 NM_178875 ENSMUSG00000055228 Zfp935 8430426H19Rik|Es113 zinc finger protein 935 protein-coding unique_peak1_22_40_1.58090879947543_6.1480064043558_9.92306813121219-2 chr13 46356221 46356728 + 9.92306813121219 NA Intergenic Intergenic -61826 NM_001081425 666794 Mm.38269 NM_001081425 ENSMUSG00000038132 Rbm24 6330546B05Rik|AI606861 RNA binding motif protein 24 protein-coding unique_peak1_22_40_1.58090879947543_6.1480064043558_9.92306813121219-4 chr2 101778487 101778953 + 9.92306813121219 NA intron (NM_001110849, intron 2 of 9) B4|SINE|B4 18987 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_21_36_1.650344377065_6.03462555416145_9.92138074692857 chr11 70800603 70801148 + 9.92138074692857 NA intron (NM_001045526, intron 1 of 4) intron (NM_001045526, intron 1 of 4) 11686 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak1_28_306_-0.91343153085761_7.80537907994137_9.92137074990582 chr15 76513685 76514354 + 9.92137074990582 NA Intergenic Intergenic -2201 NM_010046 13350 Mm.22633 NM_010046 ENSMUSG00000022555 Dgat1 ARAT|C75990|D15Ertd23e|Dgat diacylglycerol O-acyltransferase 1 protein-coding common_peak2_157_986_0.401805127843275_10.147808838378_9.92108282012855 chr5 77264915 77267372 + 9.92108282012855 NA intron (NM_011263, intron 1 of 3) CpG 649 NM_011263 19712 Mm.28840 NM_011263 ENSMUSG00000029249 Rest 2610008J04Rik|AA407358|NRSF|REST4 RE1-silencing transcription factor protein-coding common_peak2_101_524_0.538109475760328_9.30522835043365_9.92100135536274 chr4 129057866 129059865 + 9.92100135536274 NA exon (NM_029219, exon 1 of 9) exon (NM_029219, exon 1 of 9) 594 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding unique_peak2_4_84_-2.17148133087964_5.32365027069788_9.92066385172308-2 chr7 48739275 48739900 + 9.92066385172308 NA Intergenic MMVL30-int|LTR|ERV1 -49416 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding unique_peak2_4_84_-2.17148133087964_5.32365027069788_9.92066385172308 chr12 91734404 91735297 + 9.92066385172308 NA intron (NM_175367, intron 3 of 6) intron (NM_175367, intron 3 of 6) 51586 NM_175367 108800 Mm.23125 NM_175367 ENSMUSG00000020961 Ston2 4933401N24Rik|AI425999|AW544599 stonin 2 protein-coding common_peak2_315_2554_0.256216137661045_11.4472156446555_9.92008785930688 chr6 120835236 120837579 + 9.92008785930688 NA intron (NM_153516, intron 1 of 6) CpG 177 NM_153516 94044 Mm.27990 NM_153516 ENSMUSG00000009112 Bcl2l13 BCL-RAMBO|E430016C20Rik|Mil-1|Mil1 BCL2-like 13 (apoptosis facilitator) protein-coding common_peak1_283_2212_0.274596432418717_11.2490859520104_9.9192975448368 chr8 34145722 34147913 + 9.9192975448368 NA promoter-TSS (NM_026609) promoter-TSS (NM_026609) -78 NM_026609 68192 Mm.34212 NM_026609 ENSMUSG00000031513 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 protein-coding common_peak2_46_155_0.917728868563769_7.74426665314413_9.91780477550411 chr6 118561697 118562806 + 9.91780477550411 NA promoter-TSS (NM_001081112) promoter-TSS (NM_001081112) 5 NM_001081112 232339 Mm.276116 NM_001081112 ENSMUSG00000007827 Ankrd26 5730521P14Rik|BC008111|mKIAA1074 ankyrin repeat domain 26 protein-coding common_peak2_77_792_-0.531621294909762_9.3653664082491_9.91582400404745 chr5 69556119 69557935 + 9.91582400404745 NA 5' UTR (NM_172711, exon 1 of 17) 5' UTR (NM_172711, exon 1 of 17) 103 NM_001310631 231279 Mm.21105 NM_172711 ENSMUSG00000029208 Guf1 4631409J12|AA407526|EF-4 GUF1 homolog, GTPase protein-coding common_peak1_746_7907_0.148677745745708_13.0234360286021_9.91536350906437 chr17 83275369 83279454 + 9.91536350906437 NA Intergenic Intergenic 62128 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding common_peak1_571_5593_0.175750430478947_12.5375397537157_9.9152057209912 chr11 117331677 117335696 + 9.9152057209912 NA intron (NM_001113488, intron 1 of 9) intron (NM_001113488, intron 1 of 9) 1373 NM_001113488 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_130_755_0.454844837625801_9.78966484303397_9.91421305822189 chr11 88717342 88719089 + 9.91421305822189 NA promoter-TSS (NM_054043) promoter-TSS (NM_054043) 14 NM_054043 76626 Mm.400451 NM_054043 ENSMUSG00000069769 Msi2 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h musashi RNA-binding protein 2 protein-coding common_peak2_36_102_1.09328312402819_7.23314208919731_9.91330521400925 chr6 85068960 85069576 + 9.91330521400925 NA intron (NM_177077, intron 1 of 21) CpG 245 NM_177077 75914 Mm.159621 NM_177077 ENSMUSG00000033769 Exoc6b 4930569O18Rik|G430127E12Rik|Sec15b|Sec15l2|mKIAA0919 exocyst complex component 6B protein-coding common_peak1_45_469_-0.711443831285134_8.52079503092243_9.90939691475151 chr9 32660341 32661162 + 9.90939691475151 NA Intergenic RMER15|LTR|ERVL -35291 NM_011808 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_89_917_-0.48955939466282_9.5975706460824_9.9068946994606 chr17 63967382 63968754 + 9.9068946994606 NA intron (NM_008000, intron 4 of 13) intron (NM_008000, intron 4 of 13) 30096 NM_008000 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding common_peak2_75_336_0.656984044587745_8.72509680347573_9.90666662170901 chr17 27799359 27800922 + 9.90666662170901 NA intron (NM_001044719, intron 1 of 4) intron (NM_001044719, intron 1 of 4) 20402 NM_001033279 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak2_80_823_-0.52015844419034_9.42642130508805_9.90501337943701 chr2 28582052 28583517 + 9.90501337943701 NA intron (NM_001290484, intron 1 of 11) CpG 495 NM_148928 70239 Mm.274120 NM_148928 ENSMUSG00000026816 Gtf3c5 2700084A09Rik|TFIIIC63|TFiiiC2-63 general transcription factor IIIC, polypeptide 5 protein-coding common_peak1_132_1384_-0.39176994827419_10.2397852867995_9.90448949325112 chr4 43477991 43479637 + 9.90448949325112 NA Intergenic Intergenic 4895 NM_019436 54390 Mm.31775 NM_019436 ENSMUSG00000028460 Sit1 Sit suppression inducing transmembrane adaptor 1 protein-coding common_peak2_101_1044_-0.455004138654433_9.80178515764103_9.90196169780652 chr12 32819465 32821748 + 9.90196169780652 NA exon (NM_021524, exon 1 of 11) exon (NM_021524, exon 1 of 11) 271 NM_021524 59027 Mm.202727 NM_021524 ENSMUSG00000020572 Nampt 1110035O14Rik|AI314458|AI480535|NAmPRTase|Pbef|Pbef1|Visfatin nicotinamide phosphoribosyltransferase protein-coding common_peak1_72_740_-0.551010705920206_9.25782437934573_9.90055798019908 chr17 27375917 27376819 + 9.90055798019908 NA Intergenic Tigger5|DNA|TcMar-Tigger 18271 NR_106077 102466228 NR_106077 ENSMUSG00000106215 Mir7218 mmu-mir-7218 microRNA 7218 ncRNA common_peak2_67_689_-0.573691668318649_9.14360671750621_9.8968105572652 chr9 108853227 108854908 + 9.8968105572652 NA promoter-TSS (NM_134420) promoter-TSS (NM_134420) 24 NM_134420 171429 Mm.45201 NM_134420 ENSMUSG00000023259 Slc26a6 B930010B04Rik|CFEX|Pat-1|Pat1 solute carrier family 26, member 6 protein-coding common_peak2_109_586_0.51068663646222_9.45256001134116_9.89490868355515 chr15 75861605 75863182 + 9.89490868355515 NA promoter-TSS (NM_026960) promoter-TSS (NM_026960) 54 NM_026960 69146 Mm.27385 NM_026960 ENSMUSG00000022575 Gsdmd 1810036L03Rik|AW558049|DF5L|Dfna5l|Gsdmdc1|M2-4 gasdermin D protein-coding common_peak1_179_1920_-0.328238543728183_10.7435225318014_9.89488529534469 chr5 24685820 24687247 + 9.89488529534469 NA intron (NM_001305264, intron 1 of 14) intron (NM_001305264, intron 1 of 14) 718 NM_001305264 53312 Mm.5856 NM_016736 ENSMUSG00000028954 Nub1 4931404D21Rik|6330412F12Rik|BS4|NY-REN-18 negative regulator of ubiquitin-like proteins 1 protein-coding common_peak2_57_587_-0.624396719137438_8.88747398526764_9.8937010886337 chr7 139187465 139189180 + 9.8937010886337 NA exon (NM_021302, exon 1 of 12) exon (NM_021302, exon 1 of 12) 172 NM_021302 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding unique_peak1_25_52_1.42750079007773_6.44167084960207_9.89035716096264 chr4 62583354 62583977 + 9.89035716096264 NA intron (NM_019492, intron 3 of 19) CpG 23818 NM_019492 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_25_52_1.42750079007773_6.44167084960207_9.89035716096264-2 chr4 63860718 63861324 + 9.89035716096264 NA exon (NM_009403, exon 1 of 4) exon (NM_009403, exon 1 of 4) 263 NM_009403 21949 Mm.4664 NM_009403 ENSMUSG00000028362 Tnfsf8 CD153|CD30LG|Cd30l|Tnlg3a tumor necrosis factor (ligand) superfamily, member 8 protein-coding unique_peak1_25_52_1.42750079007773_6.44167084960207_9.89035716096264-3 chr8 121568513 121569196 + 9.89035716096264 NA intron (NM_133765, intron 1 of 8) intron (NM_133765, intron 1 of 8) 9952 NM_133765 76454 Mm.24829 NM_133765 ENSMUSG00000052934 Fbxo31 1110003O08Rik|2310046N15Rik|Fbx14|Fbxo14 F-box protein 31 protein-coding common_peak1_25_52_1.42750079007773_6.44167084960207_9.89035716096264 chr1 195000280 195000750 + 9.89035716096264 NA Intergenic Intergenic -16884 NR_015566 320977 Mm.99905 NR_015566 ENSMUSG00000096929 A330023F24Rik C030002C11Rik RIKEN cDNA A330023F24 gene ncRNA common_peak1_111_602_0.503775180490553_9.48790178214536_9.8892825790071 chr4 109280162 109281384 + 9.8892825790071 NA intron (NM_007943, intron 1 of 24) CpG 498 NM_007943 13858 Mm.318250 NM_007943 ENSMUSG00000028552 Eps15 2410112D09Rik epidermal growth factor receptor pathway substrate 15 protein-coding common_peak2_693_7191_0.155365001963263_12.8898598064961_9.88753422760582 chr4 135871491 135878353 + 9.88753422760582 NA Intergenic Intergenic -1076 NM_026383 52830 Mm.29159 NM_026383 ENSMUSG00000028675 Pnrc2 0610011E17Rik|D4Bwg0593e proline-rich nuclear receptor coactivator 2 protein-coding common_peak2_141_848_0.430151113480335_9.94469630029321_9.88748254816374 chr3 104787603 104789941 + 9.88748254816374 NA promoter-TSS (NM_001291859) promoter-TSS (NM_001291859) -262 NM_001291859 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding common_peak2_48_498_-0.686019768426576_8.61988612112397_9.88722476925895 chr6 134614036 134615632 + 9.88722476925895 NA intron (NM_026345, intron 3 of 3) intron (NM_026345, intron 3 of 3) 17654 NM_026345 67729 Mm.57648 NM_026345 ENSMUSG00000032718 Mansc1 9130403P13Rik MANSC domain containing 1 protein-coding common_peak1_113_618_0.497315431522267_9.5224533149754_9.88656913379832 chr2 165792342 165794045 + 9.88656913379832 NA intron (NM_001291158, intron 20 of 23) intron (NM_001291158, intron 20 of 23) 64980 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_13_167_-1.33236498394719_6.72613493080517_9.88620080966391 chr15 80264366 80264688 + 9.88620080966391 NA promoter-TSS (NM_175109) promoter-TSS (NM_175109) -221 NM_175109 66538 Mm.39485 NM_175109 ENSMUSG00000051518 Rps19bp1 2510038A11Rik|AI604923|S19BP ribosomal protein S19 binding protein 1 protein-coding common_peak1_31_78_1.21908482613442_6.91332316124431_9.88580897746596 chrX 136976332 136976849 + 9.88580897746596 NA intron (NM_001081983, intron 1 of 2) (CCA)n|Simple_repeat|Simple_repeat 284 NM_001081983 666244 Mm.381904 NM_001081983 ENSMUSG00000089768 Tmsb15b1 Tm15b thymosin beta 15b1 protein-coding unique_peak1_31_78_1.21908482613442_6.91332316124431_9.88580897746596 chr19 46987820 46988532 + 9.88580897746596 NA intron (NM_001164363, intron 1 of 17) intron (NM_001164363, intron 1 of 17) -18609 NM_001164365 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak1_497_4667_0.191663850800641_12.2844207711077_9.88393201487426 chr1 181210520 181213664 + 9.88393201487426 NA promoter-TSS (NM_145514) promoter-TSS (NM_145514) -114 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak1_55_567_-0.6365700583004_8.83146209035448_9.88384555947532 chr4 152201977 152203032 + 9.88384555947532 NA intron (NM_001146058, intron 1 of 8) intron (NM_001146058, intron 1 of 8) 2660 NM_001146058 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak2_88_906_-0.491940371764334_9.57898855464635_9.88381789653779 chr17 15563721 15565130 + 9.88381789653779 NA Intergenic CpG -1102 NM_144809 213389 Mm.215162 NM_144809 ENSMUSG00000051977 Prdm9 BC012016|Dsbc1|G1-419-29|Meisetz|PRDM9-B|Rcr1|repro7 PR domain containing 9 protein-coding common_peak1_88_906_-0.491940371764334_9.57898855464635_9.88381789653779 chr5 140610406 140611938 + 9.88381789653779 NA intron (NM_008494, intron 1 of 7) intron (NM_008494, intron 1 of 7) 3831 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_119_1240_-0.415406345159941_10.0695842275504_9.88371645742349 chr13 30618634 30620427 + 9.88371645742349 NA intron (NR_045975, intron 2 of 3) intron (NR_045975, intron 2 of 3) 4487 NR_045975 75090 Mm.292232 NR_045975 ENSMUSG00000086263 4930519D14Rik - RIKEN cDNA 4930519D14 gene ncRNA common_peak1_119_1240_-0.415406345159941_10.0695842275504_9.88371645742349-2 chr4 103113949 103115127 + 9.88371645742349 NA promoter-TSS (NM_146254) promoter-TSS (NM_146254) 148 NM_001286222 71148 Mm.288721 NM_027696 ENSMUSG00000028522 Mier1 4933425I22Rik|5830411K19Rik|er1 MEIR1 treanscription regulator protein-coding unique_peak2_22_250_-1.03308274985726_7.45500217902214_9.88115498874371 chr9 94681522 94683242 + 9.88115498874371 NA intron (NM_177909, intron 1 of 15) intron (NM_177909, intron 1 of 15) 12490 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak1_22_250_-1.03308274985726_7.45500217902214_9.88115498874371 chr19 4962048 4962384 + 9.88115498874371 NA promoter-TSS (NM_025553) promoter-TSS (NM_025553) -90 NM_025553 66419 Mm.28494 NM_025553 ENSMUSG00000024902 Mrpl11 2410001P07Rik|L11mt mitochondrial ribosomal protein L11 protein-coding common_peak2_281_2192_0.275187818092064_11.2362840057196_9.87990804835577 chr11 52264776 52269672 + 9.87990804835577 NA intron (NM_001313981, intron 3 of 10) B2_Mm2|SINE|B2 15371 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak1_21_240_-1.05309159353601_7.38634353946196_9.87933393480579 chr15 80582901 80583419 + 9.87933393480579 NA intron (NM_001289442, intron 1 of 7) intron (NM_001289442, intron 1 of 7) 10563 NM_001289442 17444 Mm.12947 NM_010815 ENSMUSG00000042351 Grap2 GRAP-2|GRB2L|GRBLG|GRID|Gads|GrbX|Grf40|GrpL|Mona|P38 GRB2-related adaptor protein 2 protein-coding common_peak2_136_806_0.439912693257078_9.87638120990632_9.878551784458 chr8 128653301 128655613 + 9.878551784458 NA Intergenic Intergenic -31197 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_34_92_1.1422869034155_7.11030226281578_9.87629489287507 chr10 61237946 61238646 + 9.87629489287507 NA intron (NM_001081127, intron 4 of 21) intron (NM_001081127, intron 4 of 21) 35142 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak2_65_668_-0.581930141794224_9.09489732974435_9.87613780128289 chr12 81483801 81485606 + 9.87613780128289 NA intron (NM_001309847, intron 3 of 5) CpG 148 NR_132135 66272 Mm.439970 NM_025461 ENSMUSG00000091803 Cox16 1810020G14Rik|1810055I05Rik|BB388670 cytochrome c oxidase assembly protein 16 protein-coding common_peak2_37_107_1.07208901241978_7.29093200837336_9.87566242752742 chr15 27724177 27725222 + 9.87566242752742 NA Intergenic Intergenic -43157 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak2_131_1372_-0.392571340113509_10.2268302400903_9.87421733465601 chr17 26972224 26974253 + 9.87421733465601 NA promoter-TSS (NM_001005916) promoter-TSS (NM_001005916) 59 NM_001005916 474156 Mm.328890 NM_001005916 ENSMUSG00000079605 Zbtb9 3930402F13Rik zinc finger and BTB domain containing 9 protein-coding common_peak1_27_296_-0.927754370782841_7.75044193540935_9.87379931778046 chr5 148928194 148928674 + 9.87379931778046 NA intron (NM_153572, intron 1 of 10) CpG 213 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak2_93_959_-0.477147196996142_9.66831699711045_9.87254857313011 chr2 69789117 69790754 + 9.87254857313011 NA promoter-TSS (NM_001077684) promoter-TSS (NM_001077684) 198 NM_028521 73373 Mm.9621 NM_028521 ENSMUSG00000027088 Phospho2 1700048E23Rik|AI661517|AU021728|AV006103|Phos2 phosphatase, orphan 2 protein-coding common_peak1_25_278_-0.968700067188255_7.63977127823506_9.86940244611277-2 chr9 20898067 20898636 + 9.86940244611277 NA intron (NM_016876, intron 2 of 10) CpG 239 NM_016876 53356 Mm.427309 NM_016876 ENSMUSG00000070319 Eif3g 44kDa|D0Jmb4|Eif3s4|TU-189B2|eIF3-p44|p44 eukaryotic translation initiation factor 3, subunit G protein-coding common_peak1_25_278_-0.968700067188255_7.63977127823506_9.86940244611277 chr10 67636706 67637329 + 9.86940244611277 NA Intergenic Intergenic -88062 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_153_1620_-0.359334523558118_10.4830011137385_9.86784407717715 chr6 99260272 99262721 + 9.86784407717715 NA intron (NM_053202, intron 2 of 18) intron (NM_053202, intron 2 of 18) 5019 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_29_69_1.27937341565274_6.76896972477133_9.86700452792776 chr13 101733461 101734038 + 9.86700452792776 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) 34468 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_42_133_0.979637979796179_7.55590818035586_9.8658120315655 chr10 61336196 61337197 + 9.8658120315655 NA intron (NM_013753, intron 18 of 19) intron (NM_013753, intron 18 of 19) 38860 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak2_69_296_0.693738904909123_8.56118857325533_9.86575134828678 chr8 86887556 86889199 + 9.86575134828678 NA Intergenic Intergenic -3119 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_51_528_-0.665090356286738_8.71457873397066_9.8636541300288 chr17 24885678 24886588 + 9.8636541300288 NA promoter-TSS (NM_001163751) promoter-TSS (NM_001163751) 217 NM_011956 26426 Mm.36718 NM_011956 ENSMUSG00000039183 Nubp2 D17Wsu11e nucleotide binding protein 2 protein-coding common_peak2_41_430_-0.747457104104244_8.37781550703698_9.86360725227267 chr5 104859393 104860603 + 9.86360725227267 NA promoter-TSS (NM_001039231) promoter-TSS (NM_001039231) 70 NM_001039231 626391 Mm.385405 NM_001039231 ENSMUSG00000072774 Zfp951 C230055K05Rik zinc finger protein 951 protein-coding common_peak2_217_1544_0.324963423924256_10.7558728347539_9.86352802314695 chr4 46553517 46559811 + 9.86352802314695 NA intron (NM_001164804, intron 2 of 11) B1F1|SINE|Alu 9776 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak2_200_1381_0.342136315914747_10.6036100583456_9.8633057733981 chr12 78225055 78227212 + 9.8633057733981 NA promoter-TSS (NM_172952) promoter-TSS (NM_172952) -522 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak1_69_708_-0.561583791529626_9.1888499214747_9.86207374264458 chr18 36018328 36019071 + 9.86207374264458 NA intron (NM_001167891, intron 9 of 9) intron (NM_001167891, intron 9 of 9) 53869 NR_110349 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding common_peak2_42_439_-0.735632543270709_8.41354344188931_9.86088453843332 chr7 63918860 63920603 + 9.86088453843332 NA intron (NM_001256311, intron 2 of 2) intron (NM_001256311, intron 2 of 2) 2874 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak2_64_264_0.727065970882334_8.41338153489173_9.86088453843322 chr1 97632229 97633805 + 9.86088453843322 NA Intergenic B4|SINE|B4 29001 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak1_148_908_0.416788517913513_10.0365307431509_9.85799478363946 chr2 172370424 172371495 + 9.85799478363946 NA promoter-TSS (NM_024199) promoter-TSS (NM_024199) -44 NM_024199 67337 Mm.26944 NM_024199 ENSMUSG00000027498 Cstf1 1700057K18Rik|AI788832 cleavage stimulation factor, 3' pre-RNA, subunit 1 protein-coding common_peak2_224_1613_0.317859361165171_10.8153545438604_9.85694782245671 chr1 21959570 21964337 + 9.85694782245671 NA promoter-TSS (NM_001160139) promoter-TSS (NM_001160139) -11 NM_023872 226922 Mm.336519 NM_023872 ENSMUSG00000028033 Kcnq5 7730402H11|9230107O05Rik|AA589396|D1Mgi1 potassium voltage-gated channel, subfamily Q, member 5 protein-coding unique_peak1_19_29_1.78424363202226_5.79901241161965_9.85300658783981 chr1 16177357 16177938 + 9.85300658783981 NA Intergenic RCHARR1|DNA|hAT-Charlie 71765 NM_133832 98711 Mm.274376 NM_133832 ENSMUSG00000025921 Rdh10 3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp retinol dehydrogenase 10 (all-trans) protein-coding common_peak1_19_29_1.78424363202226_5.79901241161965_9.85300658783981-2 chr14 27214759 27215208 + 9.85300658783981 NA intron (NM_001289686, intron 3 of 12) MER2|DNA|TcMar-Tigger -23027 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_19_29_1.78424363202226_5.79901241161965_9.85300658783981 chr10 127672814 127673254 + 9.85300658783981 NA Intergenic Intergenic -4031 NM_173732 210035 Mm.251075 NM_173732 ENSMUSG00000040195 Nemp1 Tmem194|Tmem194a nuclear envelope integral membrane protein 1 protein-coding common_peak1_145_883_0.421028778180554_9.99841694848171_9.85298272959306 chr9 50616592 50617624 + 9.85298272959306 NA promoter-TSS (NM_028300) promoter-TSS (NM_028300) -213 NM_028300 72614 Mm.147232 NM_028300 ENSMUSG00000000167 Pih1d2 2700059L22Rik PIH1 domain containing 2 protein-coding common_peak2_240_1772_0.30387467435596_10.9439141580767_9.85154162992071 chr1 37996222 37998969 + 9.85154162992071 NA promoter-TSS (NM_172054) promoter-TSS (NM_172054) -387 NM_172054 98258 Mm.28438 NM_172054 ENSMUSG00000058407 Txndc9 AI098020|APACD thioredoxin domain containing 9 protein-coding unique_peak2_19_221_-1.10328163871933_7.24277504699044_9.85109191289376 chr9 124439572 124441020 + 9.85109191289376 NA Intergenic Intergenic 16509 NR_015516 75135 Mm.476814 NR_015516 4930526I15Rik 1600027J15Rik RIKEN cDNA 4930526I15 gene ncRNA common_peak1_19_221_-1.10328163871933_7.24277504699044_9.85109191289376 chr15 6555302 6555840 + 9.85109191289376 NA Intergenic Intergenic -24276 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_38_400_-0.774514976847059_8.26020093803139_9.84996491476791 chr1 163994893 163995423 + 9.84996491476791 NA promoter-TSS (NM_201364) promoter-TSS (NM_201364) 213 NM_027279 69962 Mm.27284 NM_027279 ENSMUSG00000041396 Mettl18 2810422O20Rik|C78571 methyltransferase like 18 protein-coding unique_peak2_2_64_-2.68842927849543_4.67815317378074_9.8496207496751-3 chr4 145640528 145641114 + 9.8496207496751 NA Intergenic CpG 23675 NM_001205101 433801 Mm.276881 NM_001013808 ENSMUSG00000078502 Gm13212 OTTMUSG00000010965 predicted gene 13212 protein-coding unique_peak2_2_64_-2.68842927849543_4.67815317378074_9.8496207496751 chr2 73003166 73003675 + 9.8496207496751 NA Intergenic Intergenic -22974 NM_001018042 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding unique_peak2_2_64_-2.68842927849543_4.67815317378074_9.8496207496751-2 chr3 90475488 90475931 + 9.8496207496751 NA promoter-TSS (NM_026374) promoter-TSS (NM_026374) -492 NM_026374 67781 Mm.227258 NM_026374 ENSMUSG00000001016 Ilf2 6230405A16Rik|TEG-267|Tex261|Tex267 interleukin enhancer binding factor 2 protein-coding common_peak2_179_1185_0.36751496539134_10.3956457772417_9.84650342844323 chr12 73630060 73634994 + 9.84650342844323 NA intron (NM_001313977, intron 2 of 14) intron (NM_001313977, intron 2 of 14) 47731 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_77_791_-0.529800859285393_9.36445619043691_9.84360992631914 chr6 3398594 3399618 + 9.84360992631914 NA intron (NM_010156, intron 1 of 1) intron (NM_010156, intron 1 of 1) 465 NM_010156 209086 Mm.196013 NM_010156 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like protein-coding common_peak1_110_595_0.504749646902534_9.47154334391343_9.84337913400321 chrX 142680757 142682539 + 9.84337913400321 NA promoter-TSS (NM_001199360) promoter-TSS (NM_001199360) -78 NM_001199360 209497 Mm.249648 NM_177592 ENSMUSG00000047045 Tmem164 AI316850|AI852450|AW547186|F730011B02 transmembrane protein 164 protein-coding common_peak1_62_251_0.744329236451866_8.34944454172585_9.84003725235404 chr2 103658856 103659875 + 9.84003725235404 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 93055 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_123_1283_-0.406522660015284_10.1231681571147_9.8391146463708 chr6 114642522 114644199 + 9.8391146463708 NA intron (NM_028835, intron 1 of 18) intron (NM_028835, intron 1 of 18) 263 NM_001253717 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding common_peak1_83_853_-0.50739299344928_9.48439576289585_9.83307786616666 chr17 56818944 56820220 + 9.83307786616666 NA intron (NM_027787, intron 1 of 17) intron (NM_027787, intron 1 of 17) 11426 NM_009056 19725 Mm.102 NM_009056 ENSMUSG00000024206 Rfx2 5430432H19Rik regulatory factor X, 2 (influences HLA class II expression) protein-coding common_peak1_26_286_-0.942699359836093_7.69355724675764_9.83169080256356 chr7 114275609 114276152 + 9.83169080256356 NA intron (NM_011965, intron 1 of 9) CpG 236 NM_011965 26440 Mm.121265 NM_011965 ENSMUSG00000030751 Psma1 C2|HC2|Pros-30|alpha-type proteasome (prosome, macropain) subunit, alpha type 1 protein-coding unique_peak2_20_231_-1.08050635132907_7.31772781946303_9.83057800312982 chr6 72623500 72624876 + 9.83057800312982 NA Intergenic MER54A|LTR|ERVL -5100 NR_040422 100038714 Mm.321330 NR_040421 Gm15401 ENSMUSG00000072999|OTTMUSG00000021199 predicted gene 15401 ncRNA common_peak2_76_780_-0.532457197368913_9.34295013945752_9.82945548337483 chr3 20222278 20224475 + 9.82945548337483 NA intron (NM_007753, intron 7 of 10) intron (NM_007753, intron 7 of 10) -1017 NR_105974 102465609 NR_105974 ENSMUSG00000099105 Mir7007 Gm27897|mmu-mir-7007 microRNA 7007 ncRNA common_peak2_194_2095_-0.31237396505127_10.8772360190118_9.82784426530747 chr19 21912152 21915404 + 9.82784426530747 NA Intergenic Intergenic 135438 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_478_4437_0.195721155511427_12.2135545299527_9.82715293076219 chr2 166661956 166667898 + 9.82715293076219 NA intron (NM_177782, intron 1 of 39) B4A|SINE|B4 -7791 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_141_1483_-0.375503519587429_10.3475236168271_9.82691634983933 chr5 142920882 142922450 + 9.82691634983933 NA Intergenic B3|SINE|B2 -14912 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding unique_peak1_24_48_1.47130534802118_6.3503625181258_9.82494069645956 chr16 45886531 45887088 + 9.82494069645956 NA Intergenic Intergenic -42431 NM_001252442 208177 Mm.211477 NM_153412 ENSMUSG00000033149 Phldb2 AV253284|C820004H04Rik|LL5b|LL5beta pleckstrin homology like domain, family B, member 2 protein-coding unique_peak1_24_48_1.47130534802118_6.3503625181258_9.82494069645956-2 chr4 137597901 137598564 + 9.82494069645956 NA intron (NM_130879, intron 1 of 27) B3|SINE|B2 4043 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak1_109_1129_-0.434203727730278_9.92500519343741_9.82345983970324 chr6 129736812 129738693 + 9.82345983970324 NA intron (NM_177155, intron 3 of 5) L1M4c|LINE|L1 2732 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak2_150_1584_-0.361746740041218_10.4493937550062_9.82265403421691 chr6 48710629 48714862 + 9.82265403421691 NA Intergenic Intergenic -4501 NM_153175 231931 Mm.321047 NM_153175 ENSMUSG00000047867 Gimap6 4833419H03Rik|Ian6|mFLJ00102 GTPase, IMAP family member 6 protein-coding unique_peak1_14_14_2.27515352580283_5.04446735850993_9.82082592889914-2 chr3 22137735 22138137 + 9.82082592889914 NA intron (NM_030732, intron 1 of 15) intron (NM_030732, intron 1 of 15) 61284 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak1_14_14_2.27515352580283_5.04446735850993_9.82082592889914-3 chr4 62699123 62699501 + 9.82082592889914 NA intron (NM_001310706, intron 3 of 6) intron (NM_001310706, intron 3 of 6) 25338 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak1_14_14_2.27515352580283_5.04446735850993_9.82082592889914 chr1 170212883 170213318 + 9.82082592889914 NA intron (NM_010633, intron 1 of 7) B1_Mm|SINE|Alu 2293 NM_010633 16589 Mm.209150 NM_010633 ENSMUSG00000026667 Uhmk1 4732477C12Rik|4930500M09Rik|AA673513|AI449218|AU021979|C820018A03Rik|KIS|Kist|OTTMUSG00000021542|P-CIP2 U2AF homology motif (UHM) kinase 1 protein-coding unique_peak2_3_73_-2.36642472487649_5.0262410031907_9.82082592889914 chr18 64449594 64449997 + 9.82082592889914 NA Intergenic Intergenic 39271 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding unique_peak2_3_73_-2.36642472487649_5.0262410031907_9.82082592889914-2 chr4 98321809 98322446 + 9.82082592889914 NA Intergenic Intergenic 61138 NM_053157 94043 Mm.331719 NM_053157 ENSMUSG00000028563 Tm2d1 2310026L18Rik|AA990549|Bbp TM2 domain containing 1 protein-coding unique_peak2_23_258_-1.00303281959446_7.51529187788933_9.81945162242237 chr3 35720443 35722128 + 9.81945162242237 NA Intergenic Intergenic -32853 NM_029570 76295 Mm.239416 NM_029570 ENSMUSG00000037400 Atp11b 1110019I14Rik|ATPIF|ATPIR|mKIAA0956 ATPase, class VI, type 11B protein-coding common_peak2_113_1173_-0.426105662373521_9.98416386192329_9.81876752366864 chr6 121237225 121239585 + 9.81876752366864 NA Intergenic Intergenic -7501 NM_011909 24110 Mm.326911 NM_011909 ENSMUSG00000030107 Usp18 1110058H21Rik|AW047653|UBP43|Ubp15 ubiquitin specific peptidase 18 protein-coding common_peak2_141_849_0.428452826008309_9.94554544402922_9.81776603983654 chr5 120811663 120813426 + 9.81776603983654 NA promoter-TSS (NM_033541) promoter-TSS (NM_033541) -30 NM_033541 114643 Mm.43230 NM_033541 ENSMUSG00000001166 Oas1c Oasl2|Oasl5 2'-5' oligoadenylate synthetase 1C protein-coding common_peak1_43_139_0.957127036935341_7.60784653541264_9.81716855511712 chr10 127170500 127171522 + 9.81716855511712 NA exon (NM_008080, exon 10 of 11) exon (NM_008080, exon 10 of 11) 5180 NM_001244618 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak2_195_2107_-0.311558292353817_10.8858800054603_9.81672900003998 chr14 26667953 26670622 + 9.81672900003998 NA TTS (NR_106132) TTS (NR_106132) 321 NR_106132 102465773 NR_106132 ENSMUSG00000098751 Mir7672 Gm27314|mmu-mir-7672 microRNA 7672 ncRNA common_peak2_531_5091_0.183108231133716_12.4055708194682_9.81660365700901 chr8 46939091 46944997 + 9.81660365700901 NA Intergenic Intergenic -44881 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak2_230_1673_0.311772244376007_10.8649699347383_9.81505414555106 chr12 26067412 26069968 + 9.81505414555106 NA Intergenic Intergenic 141815 NR_131149 629481 Mm.390460 NR_131149 Gm29687 - predicted gene, 29687 ncRNA common_peak2_366_3121_0.231839910968914_11.7241747774624_9.8144607647636 chr10 83002824 83007107 + 9.8144607647636 NA intron (NM_021439, intron 1 of 2) intron (NM_021439, intron 1 of 2) 19468 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak2_156_979_0.400837695403078_10.1370567867041_9.81090158679633 chr7 126199230 126201235 + 9.81090158679633 NA 5' UTR (NM_028816, exon 1 of 24) 5' UTR (NM_028816, exon 1 of 24) 176 NM_028816 74204 Mm.235663 NM_028816 ENSMUSG00000000131 Xpo6 2610005L19Rik|AL022631|C230091E20Rik|R75304|Ranbp20|mKIAA0370 exportin 6 protein-coding common_peak1_91_451_0.571506464051035_9.1059321944407_9.80702072382878 chr17 28328050 28329580 + 9.80702072382878 NA exon (NM_011287, exon 2 of 6) exon (NM_011287, exon 2 of 6) 344 NM_011287 19896 Mm.336955 NM_011287 ENSMUSG00000037805 Rpl10a CsA-19|Nedd6 ribosomal protein L10A protein-coding common_peak2_93_958_-0.475643606405756_9.66756520181525_9.80701542476876 chr2 131233278 131235816 + 9.80701542476876 NA intron (NM_144888, intron 1 of 6) intron (NM_144888, intron 1 of 6) 484 NM_144888 228607 Mm.287226 NM_144888 ENSMUSG00000037523 Mavs D430028G21Rik|IPS-1|Visa|cardif mitochondrial antiviral signaling protein protein-coding common_peak1_28_305_-0.908724528180083_7.80302557860261_9.806039246332 chr2 170220310 170221097 + 9.806039246332 NA Intergenic Intergenic -78028 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_28_305_-0.908724528180083_7.80302557860261_9.806039246332-2 chr5 73192940 73193592 + 9.806039246332 NA intron (NM_028194, intron 3 of 62) intron (NM_028194, intron 3 of 62) 63352 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding unique_peak2_28_305_-0.908724528180083_7.80302557860261_9.806039246332 chr8 94825692 94827257 + 9.806039246332 NA intron (NM_134141, intron 6 of 8) B3|SINE|B2 11866 NM_134141 109006 Mm.27582 NM_134141 ENSMUSG00000031781 Ciapin1 2810413N20Rik|AA617265|AU021794|anamorsin cytokine induced apoptosis inhibitor 1 protein-coding common_peak2_107_572_0.513040860455401_9.41891175898461_9.80488248815801 chr13 30932421 30934278 + 9.80488248815801 NA intron (NM_025588, intron 4 of 27) MTC|LTR|ERVL-MaLR 14412 NM_153072 210554 Mm.450571 NM_153072 ENSMUSG00000076430 Hus1b - HUS1 checkpoint clamp component B protein-coding common_peak2_56_576_-0.627928789095309_8.85846311409783_9.80360500369193 chr1 86433710 86435272 + 9.80360500369193 NA Intergenic CpG 8162 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 1700019O17Rik - RIKEN cDNA 1700019O17 gene protein-coding common_peak1_12_157_-1.37497181472253_6.61629484081584_9.80341880851449 chr2 37565888 37566291 + 9.80341880851449 NA 3' UTR (NM_146121, exon 26 of 26) 3' UTR (NM_146121, exon 26 of 26) 49463 NM_177383 338346 Mm.445325 NM_177383 ENSMUSG00000053164 Gpr21 C230004C13Rik G protein-coupled receptor 21 protein-coding common_peak2_360_3054_0.233967723707945_11.6939405265601_9.80233170684765 chr2 128389581 128396920 + 9.80233170684765 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 36101 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_85_407_0.59991413946881_8.9723824117059_9.80061568422967 chr6 125144729 125146133 + 9.80061568422967 NA TTS (NM_138747) TTS (NM_138747) 207 NM_001302779 320678 Mm.129415 NM_178787 ENSMUSG00000038271 Iffo1 4733401N06Rik|A930037G23Rik|HOM-TES-103|Iffo intermediate filament family orphan 1 protein-coding common_peak1_188_2023_-0.317249898589244_10.8243686253997_9.79907066815553 chr10 118082505 118084417 + 9.79907066815553 NA Intergenic Intergenic -58326 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak1_55_566_-0.634027863737947_8.83019099307326_9.79879854437546 chr11 69991574 69992311 + 9.79879854437546 NA intron (NM_019749, intron 1 of 3) intron (NM_019749, intron 1 of 3) 572 NM_019749 56486 Mm.272460 NM_019749 ENSMUSG00000018567 Gabarap - gamma-aminobutyric acid receptor associated protein protein-coding common_peak2_55_566_-0.634027863737947_8.83019099307326_9.79879854437546 chr16 87500581 87502597 + 9.79879854437546 NA intron (NR_040375, intron 1 of 2) intron (NR_040375, intron 1 of 2) 5516 NR_040375 414095 Mm.166361 NR_040375 ENSMUSG00000093606 B130034C11Rik - RIKEN cDNA B130034C11 gene ncRNA common_peak2_357_3020_0.235346427881185_11.6784836826685_9.79841378251833 chr6 8508578 8513344 + 9.79841378251833 NA intron (NM_133236, intron 1 of 7) intron (NM_133236, intron 1 of 7) 1361 NM_133236 170772 Mm.210787 NM_133236 ENSMUSG00000029638 Glcci1 2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1 glucocorticoid induced transcript 1 protein-coding common_peak1_60_239_0.757628855438454_8.28570502332775_9.79802921812976 chr3 88553689 88554346 + 9.79802921812976 NA intron (NM_033526, intron 1 of 10) GC_rich|Low_complexity|Low_complexity 301 NM_033526 94232 Mm.303059 NM_033526 ENSMUSG00000008604 Ubqln4 A1Up|A1u|AI663987|CIP75|UBIN ubiquilin 4 protein-coding common_peak1_48_497_-0.683125695157397_8.61843908448938_9.79654426487669 chr9 44305102 44305698 + 9.79654426487669 NA intron (NM_172162, intron 1 of 9) CpG 271 NM_172162 102423 Mm.24570 NM_172162 ENSMUSG00000032119 Hinfp AA589481|HiNF-P|Mizf histone H4 transcription factor protein-coding common_peak1_52_536_-0.6530365125423_8.74226002171426_9.79526332272448 chr9 53535654 53536806 + 9.79526332272448 NA promoter-TSS (NM_001081152) promoter-TSS (NM_001081152) 441 NM_007499 11920 Mm.5088 NM_007499 ENSMUSG00000034218 Atm AI256621|C030026E19Rik ataxia telangiectasia mutated protein-coding common_peak2_112_1161_-0.426874855232128_9.96895692578846_9.79417104333127 chr15 83472740 83475272 + 9.79417104333127 NA Intergenic Intergenic -9400 NM_001159509 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_82_386_0.613316113023938_8.90284781265638_9.79411575602905 chr9 32742716 32745301 + 9.79411575602905 NA intron (NM_011808, intron 6 of 7) intron (NM_011808, intron 6 of 7) 47966 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_158_1675_-0.350930152102954_10.5353413576479_9.79184593646419 chr8 128593706 128597177 + 9.79184593646419 NA Intergenic Intergenic -90213 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_33_352_-0.833375801110654_8.04683647271585_9.79077360510507 chr5 148866100 148866850 + 9.79077360510507 NA Intergenic Intergenic 62172 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak2_135_1415_-0.384232355549756_10.2754893723081_9.78762580809447 chr6 71830638 71832442 + 9.78762580809447 NA intron (NM_029673, intron 1 of 14) CpG 220 NM_001253688 76614 Mm.235123 NM_029673 ENSMUSG00000052337 Immt 1700082C19Rik|D830041H16Rik|HMP|P87|P87/89|P89 inner membrane protein, mitochondrial protein-coding common_peak1_582_5738_0.172539519503697_12.5728534188191_9.78708992481876 chr11 83077370 83081613 + 9.78708992481876 NA Intergenic RLTR30D2_MM|LTR|ERV1 14379 NM_011408 20556 Mm.278689 NM_011408 ENSMUSG00000072620 Slfn2 Shlf2 schlafen 2 protein-coding common_peak1_97_1000_-0.463737710738952_9.73535740346652_9.78638321947968 chr8 105992312 105993805 + 9.78638321947968 NA intron (NM_176913, intron 1 of 11) B3|SINE|B2 -1285 NM_001301205 319446 Mm.248357 NM_176913 ENSMUSG00000053687 Dpep2 F630103D06Rik|MBD-2 dipeptidase 2 protein-coding common_peak2_84_863_-0.503245654310977_9.50326467500798_9.78408356830693 chr8 72474244 72476239 + 9.78408356830693 NA promoter-TSS (NM_138585) promoter-TSS (NM_138585) -8 NM_138585 27967 Mm.30136 NM_138585 ENSMUSG00000052488 Cherp 5730408I11Rik|D8Wsu96e|DAN16|Scaf6 calcium homeostasis endoplasmic reticulum protein protein-coding common_peak2_152_1607_-0.359246397898188_10.4714284922298_9.78288113250324 chr11 51688058 51689855 + 9.78288113250324 NA promoter-TSS (NM_025319) promoter-TSS (NM_025319) -322 NM_025319 66050 Mm.35693 NM_025319 ENSMUSG00000007777 0610009B22Rik - RIKEN cDNA 0610009B22 gene protein-coding common_peak1_36_381_-0.797645176824338_8.17860623962358_9.78190522936649 chr11 103953375 103954030 + 9.78190522936649 NA intron (NM_008740, intron 1 of 20) intron (NM_008740, intron 1 of 20) 354 NM_008740 18195 Mm.260117 NM_008740 ENSMUSG00000034187 Nsf AI316878|AU020090|AU067812|SKD2 N-ethylmaleimide sensitive fusion protein protein-coding common_peak1_268_2059_0.281930499498428_11.1493938718198_9.78023050622711 chr11 72795003 72797097 + 9.78023050622711 NA promoter-TSS (NM_001045536) promoter-TSS (NM_001045536) -176 NM_001045536 195018 Mm.272030 NM_001045536 ENSMUSG00000055670 Zzef1 8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399 zinc finger, ZZ-type with EF hand domain 1 protein-coding common_peak2_168_1086_0.381677623502101_10.2769750367784_9.77999811620928 chr10 96337453 96340612 + 9.77999811620928 NA Intergenic Intergenic 112825 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_168_1086_0.381677623502101_10.2769750367784_9.77999811620928-2 chr6 55037274 55039088 + 9.77999811620928 NA exon (NM_180678, exon 1 of 17) exon (NM_180678, exon 1 of 17) 180 NM_180678 353172 Mm.250004 NM_180678 ENSMUSG00000029777 Gars GENA202|Gena201|Nmf249|Sgrp23 glycyl-tRNA synthetase protein-coding common_peak2_417_3710_0.212765642013572_11.9639751067043_9.77729441566028 chr15 78876284 78880152 + 9.77729441566028 NA intron (NM_145929, intron 1 of 16) intron (NM_145929, intron 1 of 16) 1028 NM_145929 106039 Mm.251331 NM_145929 ENSMUSG00000033128 Gga1 4930406E12Rik|AU016030|AW209092 golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding common_peak2_292_2310_0.267292118725218_11.3079476038302_9.77679448598377 chr1 176812868 176815467 + 9.77679448598377 NA promoter-TSS (NM_029756) promoter-TSS (NM_029756) -493 NM_029756 76816 Mm.171399 NM_029756 ENSMUSG00000026504 Sdccag8 2700048G21Rik|5730470G24Rik|Cccap serologically defined colon cancer antigen 8 protein-coding common_peak1_101_1042_-0.452240354205953_9.80040326541679_9.7762875907508 chr16 56075161 56076406 + 9.7762875907508 NA intron (NM_001003973, intron 1 of 5) CpG 303 NM_001304503 66315 Mm.255784 NM_025483 ENSMUSG00000052917 Senp7 2410152H17Rik|2810413I22Rik|2900036C23Rik|6030449K19Rik|AI790676 SUMO1/sentrin specific peptidase 7 protein-coding common_peak2_51_527_-0.662360563531166_8.71321383759287_9.77565699282984 chr4 154963607 154965020 + 9.77565699282984 NA intron (NR_131230, intron 1 of 18) CpG 190 NR_131230 269614 Mm.30042 NM_172990 ENSMUSG00000029056 Pank4 D030031I12Rik|R75150 pantothenate kinase 4 protein-coding common_peak1_18_26_1.84547670123342_5.67762585278018_9.77555602635477 chr1 160300800 160301260 + 9.77555602635477 NA intron (NM_001038621, intron 2 of 8) intron (NM_001038621, intron 2 of 8) -5058 NR_035448 100316784 NR_035448 ENSMUSG00000089204 Mir1927 mmu-mir-1927 microRNA 1927 ncRNA common_peak2_261_2907_-0.262111980886365_11.3747555634764_9.77542042258554 chr16 55972745 55975509 + 9.77542042258554 NA non-coding (NR_027965, exon 1 of 1) non-coding (NR_027965, exon 1 of 1) 323 NM_173026 271377 Mm.282814 NM_173026 ENSMUSG00000022601 Zbtb11 9230110G02Rik|ZNF-U69274 zinc finger and BTB domain containing 11 protein-coding common_peak1_23_44_1.52192237176242_6.25281428221088_9.77523379824649 chr2 49416930 49417371 + 9.77523379824649 NA Intergenic Intergenic -34336 NM_172663 227867 Mm.29167 NM_172663 ENSMUSG00000069495 Epc2 5830499L14|D2Ertd694e enhancer of polycomb homolog 2 (Drosophila) protein-coding common_peak2_340_2831_0.242458067779161_11.5888345839726_9.77521279969785 chr3 144200807 144206418 + 9.77521279969785 NA intron (NM_010723, intron 1 of 4) intron (NM_010723, intron 1 of 4) -1216 NM_001161769 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_47_161_0.900537776393827_7.79011889108154_9.77498196096239 chr18 67289223 67290030 + 9.77498196096239 NA intron (NM_053261, intron 1 of 7) intron (NM_053261, intron 1 of 7) 403 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak2_47_161_0.900537776393827_7.79011889108154_9.77498196096239 chr6 54854682 54855719 + 9.77498196096239 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 38284 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_116_643_0.486161087646527_9.57399742193788_9.77381833910317 chr9 121304489 121306200 + 9.77381833910317 NA Intergenic B1_Mus2|SINE|Alu -28172 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding common_peak1_112_611_0.498131655479749_9.50645367043253_9.77109659658254 chr2 43748822 43751103 + 9.77109659658254 NA intron (NM_001301832, intron 1 of 14) intron (NM_001301832, intron 1 of 14) 1138 NM_001301831 76117 Mm.217350 NM_153820 ENSMUSG00000049744 Arhgap15 5830480G12Rik Rho GTPase activating protein 15 protein-coding common_peak1_112_611_0.498131655479749_9.50645367043253_9.77109659658254-2 chr3 107695698 107696730 + 9.77109659658254 NA exon (NM_145542, exon 1 of 17) exon (NM_145542, exon 1 of 17) 334 NM_145542 229709 Mm.220328 NM_145542 ENSMUSG00000027893 Ahcyl1 1110034F20Rik|AA409031|AA414901|Ahcy-rs3|DCAL|Irbit S-adenosylhomocysteine hydrolase-like 1 protein-coding common_peak2_424_3792_0.210623778436574_11.9944355455125_9.76956279083108 chr7 127476500 127481185 + 9.76956279083108 NA Intergenic CpG -6379 NM_010183 14123 Mm.323505 NM_010183 ENSMUSG00000042423 Fbrs Fbs|Fbs1 fibrosin protein-coding common_peak2_39_118_1.02292877550919_7.40628215106254_9.76832358786105 chr8 115159452 115160566 + 9.76832358786105 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 546885 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_170_1813_-0.336325504825064_10.656795988116_9.76818735630127 chr4 129740873 129744177 + 9.76818735630127 NA promoter-TSS (NM_011317) promoter-TSS (NM_011317) -222 NR_045036 20218 Mm.8256 NM_011317 ENSMUSG00000028790 Khdrbs1 Sam68|p62|p68 KH domain containing, RNA binding, signal transduction associated 1 protein-coding common_peak1_130_757_0.451033223675781_9.79157065000898_9.76664042168924 chr5 108312008 108313469 + 9.76664042168924 NA promoter-TSS (NM_001081234) promoter-TSS (NM_001081234) -187 NM_001310689 433931 Mm.319881 NM_001081234 ENSMUSG00000029263 Pigg Gpi7 phosphatidylinositol glycan anchor biosynthesis, class G protein-coding common_peak2_87_422_0.588508511946713_9.01876810909331_9.76550884065515 chr6 91877552 91878780 + 9.76550884065515 NA exon (NM_172730, exon 1 of 11) exon (NM_172730, exon 1 of 11) 113 NM_172730 232236 Mm.234879 NM_172730 ENSMUSG00000034083 Ccdc174 C130022K22Rik coiled-coil domain containing 174 protein-coding common_peak1_42_438_-0.732349959281407_8.41190214989465_9.76453133108667 chr16 36941414 36942238 + 9.76453133108667 NA intron (NM_008225, intron 3 of 13) intron (NM_008225, intron 3 of 13) 6843 NM_008225 15163 Mm.4091 NM_008225 ENSMUSG00000022831 Hcls1 AW213261|HS1 hematopoietic cell specific Lyn substrate 1 protein-coding common_peak2_42_438_-0.732349959281407_8.41190214989465_9.76453133108667 chr14 61588789 61590407 + 9.76453133108667 NA Intergenic Intergenic -8628 NM_001164220 66597 Mm.491258 NM_023233 ENSMUSG00000035235 Trim13 3110001L12Rik|CAR|LEU5|RNF77|Rfp2 tripartite motif-containing 13 protein-coding common_peak1_103_1064_-0.447991848099557_9.83264179106342_9.76441803886634 chr2 156196702 156197699 + 9.76441803886634 NA intron (NM_172674, intron 1 of 17) CpG 553 NM_172674 228829 Mm.427078 NM_172674 ENSMUSG00000038116 Phf20 6820402O20Rik PHD finger protein 20 protein-coding common_peak2_55_208_0.805817929123399_8.11026809664258_9.76268832267843 chr17 32523592 32524487 + 9.76268832267843 NA exon (NM_001101445, exon 7 of 13) exon (NM_001101445, exon 7 of 13) -12590 NM_024442 70101 Mm.30504 NM_024442 ENSMUSG00000048440 Cyp4f16 2310021J05Rik|AI746515 cytochrome P450, family 4, subfamily f, polypeptide 16 protein-coding common_peak1_111_1150_-0.428882745741593_9.95423074526143_9.76039000400301 chr17 24140870 24141632 + 9.76039000400301 NA intron (NM_001286662, intron 1 of 13) CpG 343 NM_011062 18607 Mm.10504 NM_011062 ENSMUSG00000024122 Pdpk1 Pdk1 3-phosphoinositide dependent protein kinase 1 protein-coding common_peak1_34_361_-0.818400172559672_8.09064580080337_9.75954889328778 chr3 103863791 103864599 + 9.75954889328778 NA intron (NR_104070, intron 3 of 22) MTD|LTR|ERVL-MaLR 3918 NM_008979 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding unique_peak2_31_333_-0.860838718162528_7.95328493339279_9.75933616573325 chr1 133029254 133030895 + 9.75933616573325 NA intron (NM_001302802, intron 1 of 10) RMER17C2|LTR|ERVK 513 NM_001302802 17248 Mm.426531 NM_008575 ENSMUSG00000054387 Mdm4 4933417N07Rik|AA414968|AL023055|AU018793|AU021806|C85810|Mdmx transformed mouse 3T3 cell double minute 4 protein-coding common_peak2_173_1132_0.373477996031694_10.3326711438364_9.75631878615339 chr5 110447251 110449513 + 9.75631878615339 NA 5' UTR (NM_001142642, exon 1 of 19) 5' UTR (NM_001142642, exon 1 of 19) 121 NM_001142642 381668 Mm.348782 NM_028596 ENSMUSG00000043323 Fbrsl1 2410025L10Rik|AI467568|Gm1049|Gm29766|mKIAA1545 fibrosin-like 1 protein-coding common_peak1_30_74_1.23786351423843_6.84775044761509_9.75587022171472-2 chr2 166636024 166636809 + 9.75587022171472 NA intron (NM_177782, intron 4 of 39) intron (NM_177782, intron 4 of 39) -36302 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_30_74_1.23786351423843_6.84775044761509_9.75587022171472 chr13 43765400 43766023 + 9.75587022171472 NA Intergenic Intergenic -19401 NM_009856 12522 Mm.57175 NM_009856 ENSMUSG00000015396 Cd83 - CD83 antigen protein-coding common_peak1_52_190_0.838312937407363_7.99658529673943_9.75519441645729 chr12 103433945 103435053 + 9.75519441645729 NA intron (NM_194066, intron 1 of 5) intron (NM_194066, intron 1 of 5) 310 NM_194069 52668 Mm.2121 NM_026790 ENSMUSG00000064215 Ifi27 1110013J02Rik|2900026P10Rik|D12Ertd647e|ISG12a|Ifi27l1 interferon, alpha-inducible protein 27 protein-coding common_peak1_339_3899_-0.224391938411767_11.8170624394311_9.75375988079468 chr1 165787832 165791266 + 9.75375988079468 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 868 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_72_738_-0.547111527760523_9.25587479026589_9.75154798662835 chr9 121675229 121675869 + 9.75154798662835 NA Intergenic B1_Mus1|SINE|Alu 29480 NM_001164562 215474 Mm.31421 NM_178677 ENSMUSG00000061536 Sec22c 4932412K21|5930407I15Rik|C530046H07|Sec22l3 SEC22 homolog C, vesicle trafficking protein protein-coding common_peak1_61_626_-0.599027116881377_8.99280807436135_9.75122642925391 chr4 83326458 83327349 + 9.75122642925391 NA Intergenic MLTR14|LTR|ERV1 -2714 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak2_98_1010_-0.460112818088851_9.75151087285859_9.75112656654116 chr12 112821709 112826394 + 9.75112656654116 NA intron (NM_028023, intron 1 of 1) Lx8|LINE|L1 5338 NM_028023 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding common_peak2_251_1885_0.293719821649397_11.0279738714998_9.75083370659719 chr8 72491147 72493955 + 9.75083370659719 NA promoter-TSS (NM_177766) promoter-TSS (NM_177766) 63 NM_177766 270066 Mm.291461 NM_177766 ENSMUSG00000019731 Slc35e1 6030458H05|AA408278 solute carrier family 35, member E1 protein-coding common_peak1_38_399_-0.770912740166865_8.25839981969129_9.74916482296436 chr4 55349157 55349857 + 9.74916482296436 NA promoter-TSS (NM_009011) promoter-TSS (NM_009011) -535 NM_009011 19359 Mm.196846 NM_009011 ENSMUSG00000028426 Rad23b 0610007D13Rik|AV001138|HR23B|mHR23B|p58 RAD23 homolog B, nucleotide excision repair protein protein-coding common_peak1_99_511_0.539239814509095_9.26961990725455_9.74914266852618 chr4 62501643 62502840 + 9.74914266852618 NA promoter-TSS (NM_024257) promoter-TSS (NM_024257) -41 NM_024257 72748 Mm.41506 NM_024257 ENSMUSG00000038422 Hdhd3 2810435D12Rik haloacid dehalogenase-like hydrolase domain containing 3 protein-coding common_peak1_209_2272_-0.298189426954673_11.0012872553405_9.74593543697976 chr15 96708811 96710840 + 9.74593543697976 NA Intergenic CpG -10127 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak2_466_4294_0.198074871202824_12.1674798516272_9.74436346377147 chr15 99392025 99397246 + 9.74436346377147 NA intron (NM_001171036, intron 2 of 10) intron (NM_001171036, intron 2 of 10) 1416 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak1_170_1105_0.377497565468751_10.2998844529691_9.74373350960464 chr11 121228415 121229746 + 9.74373350960464 NA promoter-TSS (NM_001254735) promoter-TSS (NM_001254735) -140 NM_001254735 217370 Mm.27182 NM_144832 ENSMUSG00000039294 BC017643 - cDNA sequence BC017643 protein-coding common_peak1_144_876_0.420335868946157_9.98660096691781_9.74104871998184 chr9 45984045 45985401 + 9.74104871998184 NA 5' UTR (NM_008775, exon 1 of 6) 5' UTR (NM_008775, exon 1 of 6) 148 NM_008775 18475 Mm.200859 NM_008775 ENSMUSG00000003131 Pafah1b2 AI747451|AU021353|Pafahb|mus[b] platelet-activating factor acetylhydrolase, isoform 1b, subunit 2 protein-coding unique_peak2_5_93_-1.99403800595825_5.55756984869851_9.7377776806434 chr17 84307939 84308871 + 9.7377776806434 NA intron (NM_183021, intron 29 of 37) intron (NM_183021, intron 29 of 37) -120458 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_73_324_0.66210005448195_8.67534593515679_9.73730522042266 chr17 34296274 34297259 + 9.73730522042266 NA Intergenic Intergenic -8995 NM_010378 14960 Mm.235338 NM_010378 ENSMUSG00000036594 H2-Aa Aalpha|H-2Aa|H2Aa|I-Aalpha|IAalpha|Ia-1|Ia1 histocompatibility 2, class II antigen A, alpha protein-coding common_peak1_205_2223_-0.30078087776041_10.9685506338433_9.73728291725685 chr9 64811287 64813004 + 9.73728291725685 NA intron (NM_001162917, intron 2 of 34) intron (NM_001162917, intron 2 of 34) 1134 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak2_393_3432_0.220464785854398_11.8554865348845_9.73661549167244 chr5 65491309 65494095 + 9.73661549167244 NA intron (NM_133697, intron 1 of 4) CpG 133 NM_133697 68552 Mm.10709 NM_133697 ENSMUSG00000037822 Smim14 1110003E01Rik|1700127H04Rik|5430439C17Rik|MAd4 small integral membrane protein 14 protein-coding common_peak1_106_1095_-0.439061663604754_9.87850125115815_9.73593763775687 chr2 113848195 113849597 + 9.73593763775687 NA promoter-TSS (NM_181416) promoter-TSS (NM_181416) -235 NM_181416 228482 Mm.45753 NM_181416 ENSMUSG00000041219 Arhgap11a 6530401L14Rik|mKIAA0013 Rho GTPase activating protein 11A protein-coding common_peak2_337_2799_0.243215047883437_11.572818635774_9.73358336555961 chr10 81296484 81300170 + 9.73358336555961 NA intron (NM_001293646, intron 1 of 18) intron (NM_001293646, intron 1 of 18) 5364 NM_001146687 18717 Mm.24222 NM_008844 ENSMUSG00000034902 Pip5k1c AI115456|AI835305|Pip5kIgamma phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma protein-coding common_peak1_126_725_0.458384956178294_9.7330182160849_9.73351445051731 chr7 13009023 13010478 + 9.73351445051731 NA promoter-TSS (NM_001024699) promoter-TSS (NM_001024699) 50 NM_001024699 232879 Mm.279272 NM_001024699 ENSMUSG00000049600 Zbtb45 BB161562|Gm157|Zfp499 zinc finger and BTB domain containing 45 protein-coding common_peak2_167_1078_0.381832427869551_10.2663953634228_9.73337100621475 chr11 86813163 86817306 + 9.73337100621475 NA intron (NR_106195, intron 2 of 8) MMVL30-int|LTR|ERV1 -7574 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding common_peak1_35_370_-0.803977703561779_8.13328652483991_9.73315082754916 chr17 25843904 25844598 + 9.73315082754916 NA TTS (NM_001163766) TTS (NM_001163766) 600 NM_145999 214952 Mm.40907 NM_145999 ENSMUSG00000025733 Rhot2 Arht2|Miro2 ras homolog family member T2 protein-coding common_peak1_35_370_-0.803977703561779_8.13328652483991_9.73315082754916-2 chr9 113930278 113930797 + 9.73315082754916 NA promoter-TSS (NM_001083319) promoter-TSS (NM_001083319) -397 NM_001083319 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding common_peak1_490_4586_0.191866747401836_12.2592685657829_9.73225932825327 chr14 121377563 121380386 + 9.73225932825327 NA 5' UTR (NM_145465, exon 1 of 11) 5' UTR (NM_145465, exon 1 of 11) 256 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_139_833_0.430766763451583_9.91928695517045_9.73210569516113 chr7 126199822 126200727 + 9.73210569516113 NA 5' UTR (NM_028816, exon 1 of 24) 5' UTR (NM_028816, exon 1 of 24) 134 NM_028816 74204 Mm.235663 NM_028816 ENSMUSG00000000131 Xpo6 2610005L19Rik|AL022631|C230091E20Rik|R75304|Ranbp20|mKIAA0370 exportin 6 protein-coding unique_peak2_13_166_-1.32375185364248_6.72182836565281_9.73204378191382 chr13 54073133 54074310 + 9.73204378191382 NA intron (NM_027324, intron 1 of 10) B3A|SINE|B2 1876 NM_027324 14057 Mm.134191 NM_027324 ENSMUSG00000021474 Sfxn1 2810002O05Rik|A930015P12Rik|f sideroflexin 1 protein-coding unique_peak2_13_166_-1.32375185364248_6.72182836565281_9.73204378191382-2 chr3 84618548 84619732 + 9.73204378191382 NA Intergenic Intergenic 25566 NM_207278 403175 Mm.83086 NM_207278 ENSMUSG00000047819 Tigd4 C130063O11Rik|Gm418 tigger transposable element derived 4 protein-coding common_peak1_13_166_-1.32375185364248_6.72182836565281_9.73204378191382 chr10 40347715 40348109 + 9.73204378191382 NA Intergenic Intergenic -1396 NM_001291817 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding unique_peak1_15_17_2.12632826168286_5.23308913228374_9.73204308298314-3 chr13 104289810 104290199 + 9.73204308298314 NA intron (NM_001081020, intron 1 of 24) intron (NM_001081020, intron 1 of 24) 2131 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding unique_peak1_15_17_2.12632826168286_5.23308913228374_9.73204308298314-4 chr2 19057805 19058244 + 9.73204308298314 NA Intergenic Intergenic 59705 NR_024323 74629 Mm.117687 NR_024323 ENSMUSG00000026736 4930426L09Rik - RIKEN cDNA 4930426L09 gene ncRNA unique_peak1_15_17_2.12632826168286_5.23308913228374_9.73204308298314 chr11 106700569 106701016 + 9.73204308298314 NA intron (NM_001305158, intron 2 of 14) intron (NM_001305158, intron 2 of 14) 14489 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding unique_peak1_15_17_2.12632826168286_5.23308913228374_9.73204308298314-2 chr12 98627867 98628293 + 9.73204308298314 NA promoter-TSS (NM_001289573) promoter-TSS (NM_001289573) -62 NM_001289573 104871 Mm.210053 NM_178914 ENSMUSG00000021007 Spata7 AI661438|B230306G18Rik|HSD3 spermatogenesis associated 7 protein-coding unique_peak1_15_17_2.12632826168286_5.23308913228374_9.73204308298314-5 chr2 93214746 93215141 + 9.73204308298314 NA intron (NM_183180, intron 5 of 9) intron (NM_183180, intron 5 of 9) 27359 NM_001025246 277414 Mm.41033 NM_001025246 ENSMUSG00000068735 Trp53i11 Tp53i11 transformation related protein 53 inducible protein 11 protein-coding common_peak1_218_2379_-0.290292315656393_11.0715997003671_9.73016403475599 chr11 86580049 86583341 + 9.73016403475599 NA Intergenic RSINE1|SINE|B4 2463 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_33_88_1.15441514119413_7.05294100156346_9.72910610165436-2 chr6 112853024 112853588 + 9.72910610165436 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 93960 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak1_33_88_1.15441514119413_7.05294100156346_9.72910610165436 chr14 121359393 121360222 + 9.72910610165436 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 19423 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_50_179_0.855817680797782_7.91976193672857_9.72866202359939 chr4 150593565 150594616 + 9.72866202359939 NA intron (NM_001085492, intron 12 of 22) intron (NM_001085492, intron 12 of 22) 58084 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak2_57_585_-0.619481228723323_8.88501624006059_9.72669908018978 chr11 120483818 120485463 + 9.72669908018978 NA promoter-TSS (NM_027204) promoter-TSS (NM_027204) -29 NM_027204 56282 Mm.133851 NM_027204 ENSMUSG00000039640 Mrpl12 0610034O11Rik|1500031N16Rik|MRP-L12|Rpml12 mitochondrial ribosomal protein L12 protein-coding unique_peak1_17_23_1.91972286115151_5.54482393129691_9.72380337862411-2 chr5 139046886 139047321 + 9.72380337862411 NA intron (NM_001253890, intron 7 of 10) MTEb|LTR|ERVL-MaLR -52150 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding unique_peak1_17_23_1.91972286115151_5.54482393129691_9.72380337862411-3 chr6 50116014 50116416 + 9.72380337862411 NA intron (NM_001164734, intron 1 of 13) intron (NM_001164734, intron 1 of 13) 5974 NM_001164733 56524 Mm.41288 NM_008016 ENSMUSG00000038388 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) protein-coding unique_peak1_17_23_1.91972286115151_5.54482393129691_9.72380337862411 chr16 91868838 91869377 + 9.72380337862411 NA intron (NM_010587, intron 27 of 38) intron (NM_010587, intron 27 of 38) 62523 NM_138597 28080 Mm.41 NM_138597 ENSMUSG00000022956 Atp5o ATPO|D12Wsu28e|OSCP ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit protein-coding common_peak1_191_2057_-0.313414865242805_10.8503198342726_9.72351597065976 chr11 73198782 73200155 + 9.72351597065976 NA promoter-TSS (NM_031251) promoter-TSS (NM_031251) -14 NM_029031 74637 Mm.200905 NM_029031 ENSMUSG00000005951 Shpk 4930431K22Rik|AI194947|AW260459|Carkl sedoheptulokinase protein-coding common_peak1_56_575_-0.625426281892139_8.85721186049624_9.71956704980979 chr15 73161221 73162107 + 9.71956704980979 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 23283 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_32_342_-0.844744818511933_7.99969235691685_9.71871668891726 chr15 75981216 75981977 + 9.71871668891726 NA exon (NM_001163518, exon 1 of 1) exon (NM_001163518, exon 1 of 1) 689 NM_001163518 223648 Mm.17610 NM_146059 ENSMUSG00000098176 Ccdc166 2410075B13Rik coiled-coil domain containing 166 protein-coding common_peak2_32_342_-0.844744818511933_7.99969235691685_9.71871668891726 chr1 155082996 155084336 + 9.71871668891726 NA Intergenic Intergenic 15970 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak2_122_692_0.468866239081496_9.67114466167796_9.71859652076681 chr4 117968789 117971246 + 9.71859652076681 NA intron (NM_001285520, intron 5 of 11) intron (NM_001285520, intron 5 of 11) -40254 NM_001284192 11876 Mm.56897 NM_009711 ENSMUSG00000028539 Artn neublastin artemin protein-coding common_peak1_36_103_1.07934393307032_7.24011168467625_9.71652780770177 chr2 126478514 126479182 + 9.71652780770177 NA intron (NM_001080944, intron 3 of 27) intron (NM_001080944, intron 3 of 27) 12705 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak1_19_220_-1.09676833176066_7.2395183935111_9.71652780770177 chrX 35898093 35898525 + 9.71652780770177 NA intron (NM_001009947, intron 1 of 52) B4|SINE|B4 9477 NM_001009947 75974 Mm.32873 NM_177745 ENSMUSG00000031093 Dock11 5033414A21Rik|8030476J24|Zizimin2|sph238 dedicator of cytokinesis 11 protein-coding common_peak1_230_1675_0.310049623226998_10.8658312453129_9.71609934340184 chr12 108764476 108766741 + 9.71609934340184 NA Intergenic Intergenic -27703 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak1_260_1978_0.286376449771625_11.0937441219333_9.71516700887836 chr15 77969851 77971917 + 9.71516700887836 NA promoter-TSS (NM_018749) promoter-TSS (NM_018749) -60 NM_018749 55944 Mm.3955 NM_018749 ENSMUSG00000016554 Eif3d 66/67kDa|AA407891|Eif3s7|eIF3p66 eukaryotic translation initiation factor 3, subunit D protein-coding common_peak2_62_252_0.738615585257472_8.35230136732305_9.71326739115747 chr8 79370336 79371505 + 9.71326739115747 NA intron (NM_008539, intron 2 of 6) intron (NM_008539, intron 2 of 6) 28548 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding common_peak1_26_285_-0.937663769938794_7.69103945180899_9.71304460125647 chr11 4704683 4705256 + 9.71304460125647 NA promoter-TSS (NM_197979) promoter-TSS (NM_197979) 291 NM_026015 67178 Mm.271056 NM_026015 ENSMUSG00000009076 Zmat5 2610510L01Rik|D11Bwg0572e|D11Bwg1548e zinc finger, matrin type 5 protein-coding common_peak2_91_452_0.568318186419988_9.10752633325623_9.71213532295467 chr9 55149029 55150601 + 9.71213532295467 NA exon (NM_180600, exon 1 of 13) exon (NM_180600, exon 1 of 13) 446 NM_180600 109161 Mm.207894 NM_180600 ENSMUSG00000032307 Ube2q2 3010021M21Rik ubiquitin-conjugating enzyme E2Q family member 2 protein-coding common_peak1_69_706_-0.557508379099509_9.18681221525964_9.71007654850342 chr17 35969941 35970744 + 9.71007654850342 NA promoter-TSS (NM_013854) promoter-TSS (NM_013854) -592 NM_013854 224742 Mm.329022 NM_013854 ENSMUSG00000038762 Abcf1 AU041969|Abc50|D17Wsu166e|GCN20 ATP-binding cassette, sub-family F (GCN20), member 1 protein-coding unique_peak1_12_9_2.60688083856721_4.62536851417097_9.7095694117554 chr15 5556047 5556459 + 9.7095694117554 NA intron (NR_045274, intron 2 of 4) intron (NR_045274, intron 2 of 4) 59935 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA unique_peak1_12_9_2.60688083856721_4.62536851417097_9.7095694117554-2 chr3 154224589 154224994 + 9.7095694117554 NA intron (NM_001081263, intron 4 of 21) MTC|LTR|ERVL-MaLR 105769 NM_010713 16875 Mm.15530 NM_010713 ENSMUSG00000096225 Lhx8 L3|Lhx7 LIM homeobox protein 8 protein-coding unique_peak1_12_9_2.60688083856721_4.62536851417097_9.7095694117554-4 chr6 140233748 140234107 + 9.7095694117554 NA Intergenic Lx5|LINE|L1 -190172 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding unique_peak1_12_9_2.60688083856721_4.62536851417097_9.7095694117554-3 chr5 123986542 123986834 + 9.7095694117554 NA intron (NM_145070, intron 1 of 31) B3A|SINE|B2 -10164 NR_105999 102465625 NR_105999 ENSMUSG00000098454 Mir7032 Gm27309|mmu-mir-7032 microRNA 7032 ncRNA unique_peak2_39_409_-0.761733560688313_8.29861331916129_9.70848515729 chr2 30061721 30063431 + 9.70848515729 NA intron (NM_023871, intron 1 of 7) intron (NM_023871, intron 1 of 7) 580 NM_023871 56086 Mm.326055 NM_023871 ENSMUSG00000054766 Set 2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I SET nuclear oncogene protein-coding common_peak1_52_535_-0.65034742501466_8.74091547795044_9.70822581187156 chr12 40036979 40037546 + 9.70822581187156 NA intron (NM_001039515, intron 1 of 1) intron (NM_001039515, intron 1 of 1) 114 NM_007487 11861 Mm.12723 NM_007487 ENSMUSG00000047446 Arl4a AI467555|Arl4 ADP-ribosylation factor-like 4A protein-coding common_peak1_117_1215_-0.415788797215404_10.0400331148359_9.70584999557445 chr3 137867097 137868436 + 9.70584999557445 NA promoter-TSS (NM_001033155) promoter-TSS (NM_001033155) 91 NM_001033155 70604 Mm.256488 NM_001033155 ENSMUSG00000074212 Dnajb14 5730496F10Rik DnaJ heat shock protein family (Hsp40) member B14 protein-coding unique_peak1_16_20_2.01121883819541_5.39792684187647_9.70551173703302 chr1 43259958 43260336 + 9.70551173703302 NA Intergenic Intergenic -63386 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak1_16_20_2.01121883819541_5.39792684187647_9.70551173703302-2 chr10 9899665 9900048 + 9.70551173703302 NA intron (NM_001081344, intron 1 of 25) intron (NM_001081344, intron 1 of 25) 1184 NM_001081344 78808 Mm.331751 NM_030191 ENSMUSG00000019790 Stxbp5 0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006 syntaxin binding protein 5 (tomosyn) protein-coding unique_peak1_16_20_2.01121883819541_5.39792684187647_9.70551173703302-4 chr15 80592440 80592846 + 9.70551173703302 NA intron (NM_001289442, intron 1 of 7) intron (NM_001289442, intron 1 of 7) 20046 NM_001289442 17444 Mm.12947 NM_010815 ENSMUSG00000042351 Grap2 GRAP-2|GRB2L|GRBLG|GRID|Gads|GrbX|Grf40|GrpL|Mona|P38 GRB2-related adaptor protein 2 protein-coding unique_peak1_16_20_2.01121883819541_5.39792684187647_9.70551173703302-3 chr12 104053903 104054300 + 9.70551173703302 NA Intergenic MIRc|SINE|MIR -9658 NM_026535 68054 Mm.20286 NM_026535 ENSMUSG00000041567 Serpina12 4632419J12Rik serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12 protein-coding common_peak1_16_20_2.01121883819541_5.39792684187647_9.70551173703302 chr6 118065357 118065819 + 9.70551173703302 NA promoter-TSS (NM_027526) promoter-TSS (NM_027526) -797 NM_027526 70727 Mm.87660 NM_027526 ENSMUSG00000030134 Rasgef1a 6330404M18Rik|AI835194 RasGEF domain family, member 1A protein-coding common_peak1_248_2744_-0.268950048570929_11.2881154096071_9.70420202936075 chr2 29645630 29648741 + 9.70420202936075 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 27465 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_94_967_-0.470393446999383_9.6836665137749_9.70340393644988 chr15 83473411 83474891 + 9.70340393644988 NA Intergenic Intergenic -9545 NM_001159509 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_132_775_0.443987470475234_9.82190657742474_9.70251069926776 chr13 113793712 113795305 + 9.70251069926776 NA promoter-TSS (NM_172595) promoter-TSS (NM_172595) 0 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding common_peak1_100_519_0.534480380577003_9.28960800331696_9.70205469335874 chrX 7713861 7714733 + 9.70205469335874 NA Intergenic CpG -7923 NM_172372 54636 Mm.305725 NM_172372 ENSMUSG00000039382 Wdr45 C79260|DXImx38e|JM5|Sfc19|WIPI-4|Wdrx1 WD repeat domain 45 protein-coding common_peak1_230_2524_-0.281211615600169_11.1614618647264_9.70171054010464 chr1 36556213 36559126 + 9.70171054010464 NA promoter-TSS (NM_001304330) promoter-TSS (NM_001304330) -112 NM_001304329 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding common_peak1_149_919_0.411271968531649_10.0511260352102_9.70149539304142 chr9 113930836 113932420 + 9.70149539304142 NA 5' UTR (NM_001083319, exon 2 of 17) 5' UTR (NM_001083319, exon 2 of 17) 694 NM_013699 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding common_peak1_64_656_-0.582835039989433_9.06833204032761_9.7012577665775 chr19 5487322 5488387 + 9.7012577665775 NA exon (NM_027877, exon 2 of 16) exon (NM_027877, exon 2 of 16) 482 NM_027877 71711 Mm.27697 NM_027877 ENSMUSG00000024906 Mus81 1200008A18Rik|AI182501|AW045863 MUS81 structure-specific endonuclease subunit protein-coding common_peak2_285_2238_0.270163844916185_11.2637207353107_9.7009150874871 chr12 111159584 111161970 + 9.7009150874871 NA intron (NR_130987, intron 3 of 3) intron (NR_130987, intron 3 of 3) -5593 NM_001286122 22031 Mm.27431 NM_011632 ENSMUSG00000021277 Traf3 AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn TNF receptor-associated factor 3 protein-coding common_peak1_49_506_-0.673214433680601_8.64923472016304_9.69770966034882 chr15 88890638 88891557 + 9.69770966034882 NA Intergenic Intergenic 28903 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding common_peak2_30_323_-0.873167798150318_7.90326610380947_9.69470851863129 chr14 75828707 75829808 + 9.69470851863129 NA Intergenic Intergenic 15707 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA common_peak2_482_4490_0.193310422732692_12.2294762181459_9.69390451620341 chr4 33246645 33249705 + 9.69390451620341 NA exon (NM_001033225, exon 1 of 2) exon (NM_001033225, exon 1 of 2) 612 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding common_peak2_454_4151_0.200859901240484_12.1200206789781_9.69345525746916 chr3 37417889 37421458 + 9.69345525746916 NA promoter-TSS (NM_001163511) promoter-TSS (NM_001163511) -77 NM_153561 229228 Mm.436967 NM_153561 ENSMUSG00000050174 Nudt6 Asfgf2b nudix (nucleoside diphosphate linked moiety X)-type motif 6 protein-coding unique_peak2_28_304_-0.90400211793768_7.80066437348141_9.69120368127506 chr12 111677395 111678576 + 9.69120368127506 NA promoter-TSS (NM_177374) promoter-TSS (NM_177374) -120 NM_001099792 328162 Mm.425747 NM_177374 ENSMUSG00000060950 Trmt61a 6720458F09Rik|AI606093|Gcd14|Trm61 tRNA methyltransferase 61A protein-coding common_peak1_196_1346_0.343572481162997_10.5673203760438_9.68924201051763 chr10 94687779 94689422 + 9.68924201051763 NA promoter-TSS (NM_029852) promoter-TSS (NM_029852) 13 NR_015524 67723 Mm.116284 NR_015524 ENSMUSG00000097164 Cep83os 4932415G12Rik|Ccdc41os1 centrosomal protein 83, opposite strand ncRNA common_peak1_149_1570_-0.360705445818171_10.4371147423851_9.68669571012918 chr4 117119901 117121375 + 9.68669571012918 NA non-coding (NR_024078, exon 7 of 7) non-coding (NR_024078, exon 7 of 7) 5087 NR_024078 78611 Mm.446227 NM_001033187 Btbd19 9530048O09Rik|BB115071 BTB (POZ) domain containing 19 ncRNA unique_peak2_14_175_-1.27738749722595_6.82073787002432_9.68667938432442 chr16 77094761 77096038 + 9.68667938432442 NA intron (NM_013918, intron 18 of 23) intron (NM_013918, intron 18 of 23) 81330 NM_013918 30940 Mm.40986 NM_013918 ENSMUSG00000022867 Usp25 - ubiquitin specific peptidase 25 protein-coding common_peak2_387_3364_0.222172196238439_11.8274768876169_9.68618960967415 chr1 46851346 46855218 + 9.68618960967415 NA intron (NM_172653, intron 1 of 9) CpG 227 NM_172653 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding common_peak1_173_1846_-0.33155800913023_10.6851891464173_9.68379877504029 chr11 95336042 95338346 + 9.68379877504029 NA exon (NM_172543, exon 1 of 8) exon (NM_172543, exon 1 of 8) 176 NM_172543 215512 Mm.262113 NM_172543 ENSMUSG00000038893 Fam117a 5730593F17Rik|AW548096 family with sequence similarity 117, member A protein-coding unique_peak2_33_351_-0.829283046476769_8.04479009539891_9.68378606337672 chr11 100413876 100415370 + 9.68378606337672 NA exon (NM_176830, exon 1 of 8) exon (NM_176830, exon 1 of 8) 196 NM_176830 66180 Mm.4940 NM_176830 ENSMUSG00000006931 P3h4 1110036O03Rik|AI413214|Leprel4|Sc65 prolyl 3-hydroxylase family member 4 (non-enzymatic) protein-coding common_peak1_33_351_-0.829283046476769_8.04479009539891_9.68378606337672 chr7 25273888 25274532 + 9.68378606337672 NA intron (NM_001302811, intron 2 of 20) intron (NM_001302811, intron 2 of 20) 6511 NM_001302811 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak2_37_108_1.05879218980632_7.29758041968009_9.68370336118403-2 chr2 124719453 124720273 + 9.68370336118403 NA Intergenic Intergenic 66282 NM_199239 214968 Mm.330536 NM_172537 ENSMUSG00000027200 Sema6d 1110067B02Rik|AA409156|D330011G23|mKIAA1479 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D protein-coding common_peak2_37_108_1.05879218980632_7.29758041968009_9.68370336118403 chr18 12941198 12942093 + 9.68370336118403 NA 5' UTR (NM_207530, exon 1 of 28) 5' UTR (NM_207530, exon 1 of 28) 196 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak1_71_311_0.672507765383131_8.62165610155381_9.68249317410774 chr11 9010363 9011626 + 9.68249317410774 NA 5' UTR (NM_001303610, exon 1 of 7) 5' UTR (NM_001303610, exon 1 of 7) 197 NM_001303610 15574 Mm.42201 NM_008316 ENSMUSG00000020413 Hus1 - HUS1 checkpoint clamp component protein-coding common_peak2_133_783_0.442446167220872_9.83593292772564_9.68201915239178 chr2 128151933 128154371 + 9.68201915239178 NA intron (NM_009754, intron 3 of 3) intron (NM_009754, intron 3 of 3) 25577 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak1_36_380_-0.793863536281911_8.17671541935237_9.67903365913993 chr3 89230024 89230672 + 9.67903365913993 NA exon (NM_013605, exon 2 of 7) exon (NM_013605, exon 2 of 7) 1292 NM_013605 17829 Mm.16193 NM_013605 ENSMUSG00000042784 Muc1 CD227|EMA|Muc-1 mucin 1, transmembrane protein-coding common_peak1_213_2318_-0.293704374103875_11.0324349175941_9.67740465402809 chr15 100705247 100706331 + 9.67740465402809 NA intron (NM_172451, intron 4 of 11) intron (NM_172451, intron 4 of 11) 14688 NM_001161768 207839 Mm.22969 NM_172451 ENSMUSG00000037280 Galnt6 4632410F13|AW047994|GalNAc-T6 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 protein-coding common_peak2_138_1446_-0.376864425739123_10.3104169936622_9.67696190833951 chr10 79993681 79997649 + 9.67696190833951 NA TTS (NM_007725) TTS (NM_007725) -1950 NM_013850 27403 Mm.103351 NM_013850 ENSMUSG00000035722 Abca7 ABCX|Abc51 ATP-binding cassette, sub-family A (ABC1), member 7 protein-coding common_peak2_259_1968_0.286891746804056_11.0866932693036_9.6759700327775 chr9 121313109 121317710 + 9.6759700327775 NA Intergenic Intergenic -38237 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding common_peak2_34_93_1.1268568628459_7.11801728310059_9.6699777407519 chr18 75488710 75489407 + 9.6699777407519 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -25587 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA common_peak1_128_1335_-0.393842606066819_10.1867829894406_9.66590809562673 chr8 84186543 84188099 + 9.66590809562673 NA Intergenic L2|LINE|L2 -8360 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak1_688_7133_0.154251180051132_12.8776210904924_9.66501473486148 chr10 19503473 19508952 + 9.66501473486148 NA Intergenic Intergenic -85746 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak2_31_79_1.20093747942416_6.92239683459944_9.66257664818425 chr8 73352959 73353585 + 9.66257664818425 NA promoter-TSS (NM_010687) promoter-TSS (NM_010687) -716 NM_010687 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_15_184_-1.23512819739114_6.91381736182074_9.6625766481842 chr2 166652928 166653312 + 9.6625766481842 NA intron (NM_177782, intron 1 of 39) intron (NM_177782, intron 1 of 39) -19598 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA unique_peak2_15_184_-1.23512819739114_6.91381736182074_9.6625766481842 chr2 89921371 89922271 + 9.6625766481842 NA Intergenic RMER19B|LTR|ERVK -7990 NM_146978 258980 Mm.223370 NM_146978 ENSMUSG00000049149 Olfr1258 MOR232-3 olfactory receptor 1258 protein-coding common_peak1_139_834_0.42903794953483_9.92015136212883_9.66233950293384 chr8 33731833 33733218 + 9.66233950293384 NA intron (NM_001167922, intron 1 of 7) CpG 186 NM_001167922 68153 Mm.286104 NM_026584 ENSMUSG00000031585 Gtf2e2 34kDa|AI462509|C330006J08Rik general transcription factor II E, polypeptide 2 (beta subunit) protein-coding common_peak2_454_4152_0.200512473173571_12.1201943930116_9.6621550665797 chr11 106156883 106161704 + 9.6621550665797 NA intron (NM_172397, intron 2 of 4) intron (NM_172397, intron 2 of 4) 849 NM_172397 67803 Mm.21687 NM_172397 ENSMUSG00000040699 Limd2 0610025L06Rik|AI413966 LIM domain containing 2 protein-coding common_peak1_66_675_-0.57033573613246_9.11571156821595_9.66151609962685 chr6 143868242 143869228 + 9.66151609962685 NA intron (NM_001113559, intron 9 of 13) T-rich|Low_complexity|Low_complexity -217447 NR_045732 73425 Mm.417844 NR_045732 ENSMUSG00000086887 1700060C16Rik - RIKEN cDNA 1700060C16 gene ncRNA common_peak2_231_1686_0.308255989784069_10.8743722531796_9.66101948418965 chr19 55252926 55254783 + 9.66101948418965 NA 5' UTR (NM_027976, exon 1 of 22) 5' UTR (NM_027976, exon 1 of 22) 485 NM_027976 433256 Mm.292056 NM_027976 ENSMUSG00000024981 Acsl5 1700030F05Rik|ACS2|ACS5|Facl5 acyl-CoA synthetase long-chain family member 5 protein-coding unique_peak2_6_102_-1.853160399538_5.75992032741422_9.66017915552575 chr4 11075630 11076334 + 9.66017915552575 NA exon (NM_001085493, exon 1 of 9) exon (NM_001085493, exon 1 of 9) 223 NM_001085493 76947 Mm.275265 NM_001085493 ENSMUSG00000050323 Ndufaf6 2310030N02Rik NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 protein-coding common_peak2_101_527_0.529888968955358_9.30933860383613_9.65656631578774 chr14 57998405 57999759 + 9.65656631578774 NA exon (NM_028643, exon 1 of 12) exon (NM_028643, exon 1 of 12) 180 NM_028643 68514 Mm.26834 NM_028643 ENSMUSG00000021973 Micu2 1110008L20Rik|4833427E09Rik|AU041871|Efha1|Smhs2 mitochondrial calcium uptake 2 protein-coding common_peak1_101_527_0.529888968955358_9.30933860383613_9.65656631578774 chr16 37867817 37869185 + 9.65656631578774 NA exon (NM_177093, exon 1 of 4) exon (NM_177093, exon 1 of 4) 101 NM_177093 320184 Mm.390882 NM_177093 ENSMUSG00000034158 Lrrc58 1810012N18Rik|C330018J07Rik leucine rich repeat containing 58 protein-coding common_peak1_172_1124_0.37350124538815_10.3224599087985_9.65650983148803 chr1 16618002 16619553 + 9.65650983148803 NA intron (NR_073122, intron 1 of 4) CpG 561 NM_025773 66799 Mm.122430 NM_025773 ENSMUSG00000025939 Ube2w 6130401J04Rik ubiquitin-conjugating enzyme E2W (putative) protein-coding common_peak1_16_193_-1.19637658121296_7.00172455158065_9.65608484924076 chr4 148085833 148086332 + 9.65608484924076 NA intron (NM_001301281, intron 1 of 4) MER53|DNA|hAT 1982 NM_009642 11610 Mm.46247 NM_009642 ENSMUSG00000029007 Agtrap 3300002E14Rik|AT1R|Atrap|D4Wsu124e angiotensin II, type I receptor-associated protein protein-coding common_peak2_81_829_-0.508911949982505_9.44251155124303_9.65526536119879 chr2 32519357 32522132 + 9.65526536119879 NA Intergenic Intergenic -14615 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak2_119_1236_-0.410748730005954_10.0672554199734_9.65375261355242 chr8 106005011 106007316 + 9.65375261355242 NA Intergenic Intergenic -5315 NM_025518 66369 Mm.287500 NM_025518 ENSMUSG00000031901 Dus2 2310016K04Rik|Dus2l dihydrouridine synthase 2 protein-coding common_peak1_31_332_-0.856512792759737_7.95112197069139_9.64958494213185 chr12 85110228 85110776 + 9.64958494213185 NA promoter-TSS (NM_030225) promoter-TSS (NM_030225) -331 NM_030225 78920 Mm.296221 NM_030225 ENSMUSG00000004789 Dlst 1600017E01Rik|4632413C10Rik|4930529O08Rik|DLTS dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) protein-coding common_peak2_31_332_-0.856512792759737_7.95112197069139_9.64958494213185 chr1 169531471 169532368 + 9.64958494213185 NA promoter-TSS (NM_023284) promoter-TSS (NM_023284) -455 NM_023284 66977 Mm.151315 NM_023284 ENSMUSG00000026683 Nuf2 2410003C07Rik|AU044112|C85691|Cdca1|NUF2R NUF2, NDC80 kinetochore complex component protein-coding common_peak2_31_332_-0.856512792759737_7.95112197069139_9.64958494213185-2 chr8 25608496 25609960 + 9.64958494213185 NA intron (NM_001308482, intron 1 of 7) intron (NM_001308482, intron 1 of 7) 6944 NM_001308482 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Whsc1l1 6720429E03|A530023P05|AI528490|NSD3|WHISTLE Wolf-Hirschhorn syndrome candidate 1-like 1 (human) protein-coding common_peak1_38_398_-0.767301486614484_8.2565941929151_9.64876710013376 chr11 5999226 6000014 + 9.64876710013376 NA intron (NM_001174053, intron 4 of 19) intron (NM_001174053, intron 4 of 19) 43862 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding common_peak1_59_234_0.758751797219061_8.25589284517453_9.64876710013376 chr10 83360193 83361006 + 9.64876710013376 NA intron (NM_026579, intron 1 of 3) CpG 378 NM_026579 28109 Mm.196210 NM_026579 ENSMUSG00000020255 D10Wsu102e AI747614|C430041I18Rik DNA segment, Chr 10, Wayne State University 102, expressed protein-coding common_peak1_43_140_0.946858701481514_7.61298070313955_9.64840209582804 chr14 67803052 67803924 + 9.64840209582804 NA intron (NM_177780, intron 25 of 51) B3|SINE|B2 56257 NR_105857 102465310 NR_105857 ENSMUSG00000098866 Mir6539 Gm27464|mir-6539|mmu-mir-6539 microRNA 6539 ncRNA common_peak1_43_140_0.946858701481514_7.61298070313955_9.64840209582804-2 chr17 87339211 87340331 + 9.64840209582804 NA intron (NM_028639, intron 11 of 19) intron (NM_028639, intron 11 of 19) 56885 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak1_117_1214_-0.414601882264963_10.0394396573607_9.64808787608741 chr8 22859498 22860913 + 9.64808787608741 NA intron (NM_001081149, intron 1 of 17) CpG 666 NM_001081149 244349 Mm.182776 NM_001081149 ENSMUSG00000031540 Kat6a 1500036M03|9930021N24Rik|MOZ|Myst3|Zfp220 K(lysine) acetyltransferase 6A protein-coding common_peak1_59_605_-0.607905239688892_8.9392213636285_9.64474417722893-2 chr6 113638367 113639300 + 9.64474417722893 NA intron (NM_001113553, intron 1 of 11) intron (NM_001113553, intron 1 of 11) 366 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding common_peak1_59_605_-0.607905239688892_8.9392213636285_9.64474417722893 chr1 193264061 193265051 + 9.64474417722893 NA promoter-TSS (NM_008288) promoter-TSS (NM_008288) -511 NM_008288 15483 Mm.28328 NM_008288 ENSMUSG00000016194 Hsd11b1 - hydroxysteroid 11-beta dehydrogenase 1 protein-coding common_peak1_43_447_-0.720944868177297_8.44688248796896_9.64372943005154 chr9 118404881 118405699 + 9.64372943005154 NA Intergenic Intergenic -24549 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak2_70_716_-0.552669762854887_9.20949442727446_9.64253932701699 chr2 157130806 157132439 + 9.64253932701699 NA intron (NM_001139520, intron 1 of 16) intron (NM_001139520, intron 1 of 16) 3600 NM_001139520 56045 Mm.248478 NM_018851 ENSMUSG00000027639 Samhd1 E330031J07Rik|Mg11 SAM domain and HD domain, 1 protein-coding common_peak1_113_1170_-0.422414329764685_9.98231819561887_9.64184934861087-2 chr17 65782377 65783517 + 9.64184934861087 NA promoter-TSS (NR_104465) promoter-TSS (NR_104465) -408 NM_001114131 70351 Mm.48686 NM_146081 ENSMUSG00000061950 Ppp4r1 3110001J10Rik|Pp4r1 protein phosphatase 4, regulatory subunit 1 protein-coding common_peak1_113_1170_-0.422414329764685_9.98231819561887_9.64184934861087 chr12 8500169 8501317 + 9.64184934861087 NA promoter-TSS (NM_007483) promoter-TSS (NM_007483) -758 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding common_peak2_406_3585_0.215005291470888_11.9156624186038_9.64162673829328 chr10 41518186 41521117 + 9.64162673829328 NA exon (NM_016898, exon 1 of 6) exon (NM_016898, exon 1 of 6) 151 NM_016898 53599 Mm.269815 NM_016898 ENSMUSG00000019818 Cd164 A115|A24|AA589639|AW540279|MGC-24|MSSP CD164 antigen protein-coding common_peak2_311_2517_0.254717815447913_11.425421475443_9.64129234075311 chr4 154159094 154162028 + 9.64129234075311 NA exon (NM_026388, exon 1 of 4) exon (NM_026388, exon 1 of 4) 123 NM_026388 67808 Mm.288737 NM_026388 ENSMUSG00000029030 Tprgl 1200015A19Rik|Svap30|Tprg1l|mover transformation related protein 63 regulated like protein-coding common_peak1_27_294_-0.918006394231279_7.74556794713356_9.64044933002109 chr4 101176630 101177291 + 9.64044933002109 NA intron (NM_146145, intron 8 of 24) intron (NM_146145, intron 8 of 24) 88322 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_86_881_-0.491837014891669_9.53871633811169_9.63556383591842 chr12 25360229 25361205 + 9.63556383591842 NA Intergenic MTE2b|LTR|ERVL-MaLR 231543 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_56_215_0.789611217386705_8.14969311085682_9.63446285981106-2 chr4 95303024 95304173 + 9.63446285981106 NA Intergenic Intergenic -251376 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak1_56_215_0.789611217386705_8.14969311085682_9.63446285981106 chr14 47514873 47515715 + 9.63446285981106 NA intron (NR_027414, intron 4 of 5) intron (NR_027414, intron 4 of 5) 42733 NM_001146085 78938 Mm.11935 NM_030236 ENSMUSG00000037536 Fbxo34 2900057B08Rik|5830426G16Rik F-box protein 34 protein-coding common_peak2_58_228_0.766322616944882_8.22236509656938_9.63103156755449 chr2 60869459 60871448 + 9.63103156755449 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 10985 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_29_70_1.25890931309302_6.77920177605119_9.63071037953858 chr10 26828181 26828738 + 9.63071037953858 NA intron (NM_176837, intron 1 of 14) intron (NM_176837, intron 1 of 14) 55947 NM_176837 73910 Mm.356496 NM_176837 ENSMUSG00000039031 Arhgap18 4833419J07Rik|AI314906|AI843501 Rho GTPase activating protein 18 protein-coding common_peak1_22_248_-1.02154112797457_7.4492313680808_9.62778347176669 chr1 171111476 171112040 + 9.62778347176669 NA Intergenic Intergenic -9903 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak1_96_490_0.545759149048717_9.21245878883905_9.62687358237321-2 chr15 89475641 89476770 + 9.62687358237321 NA promoter-TSS (NR_077233) promoter-TSS (NR_077233) -47 NR_077233 100532730 Mm.461541 NR_077233 C230037L18Rik - RIKEN cDNA C230037L18 gene ncRNA common_peak1_96_490_0.545759149048717_9.21245878883905_9.62687358237321 chr12 69892388 69893300 + 9.62687358237321 NA promoter-TSS (NM_178628) promoter-TSS (NM_178628) -261 NM_178628 73991 Mm.474462 NM_178628 ENSMUSG00000021066 Atl1 4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a atlastin GTPase 1 protein-coding common_peak1_54_554_-0.635052942851553_8.79881748981169_9.62507743475235 chr7 51722901 51724016 + 9.62507743475235 NA Intergenic Intergenic 101628 NM_080853 140919 Mm.256618 NM_080853 ENSMUSG00000030500 Slc17a6 2900073D12Rik|DNPI|VGLUT2 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 protein-coding common_peak2_80_819_-0.513138016512567_9.42291109124916_9.62306356535942 chr9 66598275 66600538 + 9.62306356535942 NA Intergenic ID_B1|SINE|B4 -6291 NM_001302122 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding common_peak1_64_655_-0.580637484285187_9.06723326247549_9.62287086779978 chr2 32287252 32288099 + 9.62287086779978 NA promoter-TSS (NM_133852) promoter-TSS (NM_133852) 394 NR_110965 72931 Mm.27344 NM_175190 ENSMUSG00000044627 Swi5 1500019F05Rik|2900010J23Rik|AI046671 SWI5 recombination repair homolog (yeast) protein-coding common_peak1_21_238_-1.0410690652868_7.38033227533735_9.62093623335683 chr7 143296095 143296617 + 9.62093623335683 NA non-coding (NR_001461, exon 1 of 1) non-coding (NR_001461, exon 1 of 1) 191 NR_001461 63830 Mm.356096 NR_001461 ENSMUSG00000101609 Kcnq1ot1 Kvlqt1-as|Lit1|Tssc8 KCNQ1 overlapping transcript 1 ncRNA common_peak1_25_53_1.40053374247746_6.4551543734022_9.62039360628065-2 chr2 163701981 163702498 + 9.62039360628065 NA intron (NM_011106, intron 1 of 3) intron (NM_011106, intron 1 of 3) 8202 NM_011106 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak1_25_53_1.40053374247746_6.4551543734022_9.62039360628065 chr14 54180866 54181419 + 9.62039360628065 NA Intergenic Intergenic 72787 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_22_41_1.54614338131475_6.16538911343614_9.6180250372895 chr13 33065745 33066320 + 9.6180250372895 NA Intergenic Charlie6|DNA|hAT-Charlie -18071 NM_173052 282663 Mm.314490 NM_173052 ENSMUSG00000051029 Serpinb1b 6330533H24Rik|EIB|Serpin1b1|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1b protein-coding common_peak2_54_203_0.80886567641442_8.07685818017871_9.61678129245646 chr7 97696202 97697238 + 9.61678129245646 NA promoter-TSS (NM_023671) promoter-TSS (NM_023671) 63 NM_023671 12729 Mm.21482 NM_023671 ENSMUSG00000025439 Clns1a 2610036D06Rik|2610100O04Rik|Clci|Clcni|ICLN chloride channel, nucleotide-sensitive, 1A protein-coding common_peak1_46_476_-0.694714368579493_8.55048827171576_9.61463538381854 chr5 100415617 100416250 + 9.61463538381854 NA intron (NM_026969, intron 1 of 27) intron (NM_026969, intron 1 of 27) 301 NM_026969 69162 Mm.18634 NM_026969 ENSMUSG00000035325 Sec31a 1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1 Sec31 homolog A (S. cerevisiae) protein-coding common_peak1_253_2803_-0.264447628650224_11.3210468196855_9.61200950732163 chrX 94121332 94123870 + 9.61200950732163 NA intron (NM_001044386, intron 1 of 8) CpG 806 NM_011768 22764 Mm.919 NM_011768 ENSMUSG00000079509 Zfx Zfx5|Zfx5,6|Zfx6 zinc finger protein X-linked protein-coding common_peak1_32_341_-0.840532567225018_7.99758623127339_9.61061568869389 chr13 24511735 24512320 + 9.61061568869389 NA Intergenic Intergenic -70162 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak2_141_852_0.423369925715082_9.94808689417583_9.61037630611336 chr6 97320483 97322859 + 9.61037630611336 NA intron (NM_145148, intron 12 of 23) IMPB_01|Satellite|Satellite -68891 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_211_2292_-0.294054251764969_11.0159935136983_9.6083300510735 chr8 26118389 26120105 + 9.6083300510735 NA promoter-TSS (NM_029965) promoter-TSS (NM_029965) -23 NM_207659 320191 Mm.334464 NM_207659 ENSMUSG00000037234 Hook3 5830454D03Rik|AI317159|E330005F07Rik hook microtubule tethering protein 3 protein-coding common_peak2_476_4420_0.193853778795614_12.2070839083519_9.60546026464388 chr1 21346624 21357066 + 9.60546026464388 NA 3' UTR (NM_183322, exon 3 of 3) 3' UTR (NM_183322, exon 3 of 3) 2168 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_79_808_-0.515637042426489_9.40217737121673_9.60495283426904 chr17 73249887 73251133 + 9.60495283426904 NA Intergenic ORR1A4|LTR|ERVL-MaLR 142525 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding common_peak1_123_702_0.462525948034484_9.68864385308978_9.60489765563477 chr6 140513549 140515556 + 9.60489765563477 NA intron (NM_144920, intron 3 of 30) intron (NM_144920, intron 3 of 30) 90453 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding unique_peak2_10_138_-1.48575564121591_6.37606325211555_9.60480765909218 chr2 168980031 168980977 + 9.60480765909218 NA Intergenic Intergenic 2235 NR_040326 75508 Mm.271256 NR_040326 ENSMUSG00000086348 1700017J07Rik - RIKEN cDNA 1700017J07 gene ncRNA common_peak1_72_736_-0.543201782709442_9.25391991774035_9.60349544968882 chr13 19517169 19518169 + 9.60349544968882 NA Intergenic MTA_Mm|LTR|ERVL-MaLR -13302 NR_131037 319466 NR_131037 9330199G10Rik - RIKEN cDNA 9330199G10 gene ncRNA common_peak1_85_409_0.59285938193486_8.97590979047288_9.60170054805893 chr8 124255559 124256945 + 9.60170054805893 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 24858 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_102_536_0.522769605791327_9.33016308088107_9.5982183220353 chr10 80264902 80265831 + 9.5982183220353 NA intron (NM_001122604, intron 1 of 11) intron (NM_001122604, intron 1 of 11) 375 NM_133188 70248 Mm.148693 NM_133188 ENSMUSG00000069565 Dazap1 2410042M16Rik|mPrrp DAZ associated protein 1 protein-coding common_peak2_46_157_0.899350339248914_7.75345591780156_9.59775564284641 chr3 69170971 69171951 + 9.59775564284641 NA Intergenic Intergenic 40228 NR_126533 381452 Mm.331067 NM_001243000 ENSMUSG00000094763 Gm1647 - predicted gene 1647 ncRNA common_peak1_68_292_0.687838465824546_8.53867608733452_9.59703670934606 chr9 66124046 66124877 + 9.59703670934606 NA intron (NM_019727, intron 1 of 14) intron (NM_019727, intron 1 of 14) 425 NM_019727 56440 Mm.271891 NM_019727 ENSMUSG00000032382 Snx1 - sorting nexin 1 protein-coding common_peak2_168_1089_0.377701428865121_10.2789631340968_9.59673277770887 chr3 107630547 107632619 + 9.59673277770887 NA exon (NM_153563, exon 1 of 21) exon (NM_153563, exon 1 of 21) 127 NM_153563 229707 Mm.278643 NM_153563 ENSMUSG00000014601 Strip1 6330569M22Rik|6530401O14Rik|Fam40a striatin interacting protein 1 protein-coding common_peak1_24_266_-0.974680739551171_7.57335556191197_9.59602179484086 chr14 70766687 70767174 + 9.59602179484086 NA promoter-TSS (NM_023045) promoter-TSS (NM_023045) -302 NM_023045 65246 Mm.152987 NM_023045 ENSMUSG00000022100 Xpo7 4930506C02Rik|BB164534|Ranbp16|mKIAA0745 exportin 7 protein-coding common_peak1_110_598_0.49750597457591_9.47516518007674_9.59595186118851 chr13 66904371 66905768 + 9.59595186118851 NA promoter-TSS (NM_001177750) promoter-TSS (NM_001177750) 281 NM_026219 67530 Mm.379136 NM_026219 ENSMUSG00000021520 Uqcrb 2210415M14Rik|QP-C|QPC|UQBC|UQBP|UQPC ubiquinol-cytochrome c reductase binding protein protein-coding common_peak1_26_284_-0.93261054221251_7.68851283794585_9.59492156394832 chr3 52000236 52000762 + 9.59492156394832 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 104507 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like 3 (Drosophila) protein-coding common_peak1_26_284_-0.93261054221251_7.68851283794585_9.59492156394832-2 chr5 135744312 135745003 + 9.59492156394832 NA promoter-TSS (NM_172541) promoter-TSS (NM_172541) -485 NM_172541 215210 Mm.11688 NM_172541 ENSMUSG00000039886 Tmem120a 2010310D06Rik|Tmpit transmembrane protein 120A protein-coding common_peak1_99_1018_-0.453698521656719_9.76608907533745_9.59098142452279 chr5 110107165 110108800 + 9.59098142452279 NA exon (NM_145147, exon 1 of 10) exon (NM_145147, exon 1 of 10) 215 NM_145147 107999 Mm.86267 NM_145147 ENSMUSG00000033434 Gtpbp6 AV119224|Pgbpll|pgpl GTP binding protein 6 (putative) protein-coding common_peak1_61_624_-0.594417863628786_8.99050344773505_9.5906377348493 chr18 69592773 69593875 + 9.5906377348493 NA intron (NM_001083967, intron 8 of 19) intron (NM_001083967, intron 8 of 19) 247603 NM_001083967 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak1_61_624_-0.594417863628786_8.99050344773505_9.5906377348493-2 chr7 19715765 19716479 + 9.5906377348493 NA promoter-TSS (NM_001109748) promoter-TSS (NM_001109748) -693 NM_016871 53333 Mm.61682 NM_016871 ENSMUSG00000002984 Tomm40 AW539759|Mom35|Tom40 translocase of outer mitochondrial membrane 40 homolog (yeast) protein-coding common_peak1_67_685_-0.56530388282593_9.13941282475985_9.5891665005147 chr6 87541311 87542020 + 9.5891665005147 NA Intergenic ID|SINE|ID -8406 NM_001286610 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak2_49_174_0.861416391490412_7.88191930757753_9.58835065702351 chr17 73970044 73971467 + 9.58835065702351 NA Intergenic Intergenic -20559 NM_011723 22436 Mm.11223 NM_011723 ENSMUSG00000024066 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase protein-coding common_peak1_49_174_0.861416391490412_7.88191930757753_9.58835065702351 chr9 26998905 26999559 + 9.58835065702351 NA promoter-TSS (NM_144543) promoter-TSS (NM_144543) 317 NM_025862 66948 Mm.289244 NM_025862 ENSMUSG00000031969 Acad8 2310016C19Rik|AI786953 acyl-Coenzyme A dehydrogenase family, member 8 protein-coding common_peak1_129_1345_-0.390935863091064_10.1989947630648_9.58646563025867 chr18 49755001 49756461 + 9.58646563025867 NA promoter-TSS (NM_001170960) promoter-TSS (NM_001170960) -130 NM_001170960 68857 Mm.96010 NM_026854 ENSMUSG00000024505 Dtwd2 1190002H09Rik|8030470C17Rik|AI414673|BB115449 DTW domain containing 2 protein-coding common_peak1_39_119_1.01085594320861_7.41231856721283_9.58616551539417 chr15 74917931 74918678 + 9.58616551539417 NA Intergenic Intergenic -36600 NM_025929 67038 Mm.154566 NM_025929 ENSMUSG00000063522 2010109I03Rik Ly6m RIKEN cDNA 2010109I03 gene protein-coding common_peak1_142_861_0.420646287493328_9.96186720283576_9.5854613267177 chr19 56721277 56723913 + 9.5854613267177 NA exon (NM_007419, exon 1 of 1) exon (NM_007419, exon 1 of 1) 223 NM_007419 11554 Mm.46797 NM_007419 ENSMUSG00000035283 Adrb1 Adrb-1|beta-AR adrenergic receptor, beta 1 protein-coding common_peak1_19_219_-1.09022548589388_7.23624697057772_9.58259320802702 chr8 70754672 70755221 + 9.58259320802702 NA intron (NM_001166399, intron 1 of 4) CpG 267 NM_001166399 19339 Mm.5083 NM_009001 ENSMUSG00000031840 Rab3a - RAB3A, member RAS oncogene family protein-coding common_peak2_408_3610_0.213657021361302_11.9250112156293_9.58161800013283 chr7 30955233 30958168 + 9.58161800013283 NA exon (NM_011680, exon 1 of 10) exon (NM_011680, exon 1 of 10) 103 NM_011680 22282 Mm.322453 NM_011680 ENSMUSG00000058239 Usf2 Usf-2|bHLHb12 upstream transcription factor 2 protein-coding common_peak1_50_180_0.847824890044251_7.92375833210533_9.58003482144342 chr2 30634732 30635742 + 9.58003482144342 NA Intergenic Intergenic 40193 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding common_peak1_13_165_-1.31508699251535_6.71749593508925_9.5786390712688 chr14 51089100 51089466 + 9.5786390712688 NA Intergenic Intergenic -1794 NM_001161731 11727 Mm.202665 NM_007447 ENSMUSG00000072115 Ang AI385586|Ang1|Rnase5|Rnase5a angiogenin, ribonuclease, RNase A family, 5 protein-coding common_peak2_75_339_0.644197889631901_8.73148988095365_9.57826483023424 chr7 28435588 28436385 + 9.57826483023424 NA intron (NM_175021, intron 1 of 12) CpG 205 NM_175021 233033 Mm.54120 NM_175021 ENSMUSG00000109336 Samd4b BC042901 sterile alpha motif domain containing 4B protein-coding common_peak1_97_498_0.54059254275978_9.23319227671715_9.57748861210373 chr1 21270303 21272461 + 9.57748861210373 NA Intergenic Intergenic 26930 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo common_peak2_231_2533_-0.278700561069174_11.1678505286062_9.57701884954322 chr3 32396011 32398587 + 9.57701884954322 NA Intergenic CpG -31634 NM_009517 22401 Mm.35705 NM_009517 ENSMUSG00000027663 Zmat3 Wig1 zinc finger matrin type 3 protein-coding common_peak2_312_3545_-0.233533624904476_11.6752100084465_9.57289590493189 chr15 76349557 76352085 + 9.57289590493189 NA promoter-TSS (NM_001164608) promoter-TSS (NM_001164608) 289 NM_025340 106025 Mm.41463 NM_025340 ENSMUSG00000022552 Sharpin 0610041B22Rik|AW121341|RBCKL1|SIPL1|cpdm SHANK-associated RH domain interacting protein protein-coding common_peak1_41_427_-0.737380031416292_8.372776970693_9.57268878509551 chr7 126565563 126566420 + 9.57268878509551 NA intron (NM_146200, intron 2 of 20) CpG 375 NM_146200 56347 Mm.22776 NM_146200 ENSMUSG00000030738 Eif3c 110kDa|3230401O13Rik|Eif3s8|NIPIL(A3)|NipilA3|Xs|Xsl eukaryotic translation initiation factor 3, subunit C protein-coding common_peak1_500_4715_0.187533118861479_12.2971145624105_9.57252225228927 chr5 91960335 91963756 + 9.57252225228927 NA promoter-TSS (NR_028429) promoter-TSS (NR_028429) 511 NR_073442 68098 Mm.159453 NM_026557 ENSMUSG00000029397 Rchy1 ARNIP|CHIMP|Pirh2|Zfp363|Znf363 ring finger and CHY zinc finger domain containing 1 protein-coding common_peak1_155_974_0.396909663343601_10.1277132403088_9.57202360181798 chr6 116207453 116208888 + 9.57202360181798 NA promoter-TSS (NR_131013) promoter-TSS (NR_131013) 137 NM_026585 28006 Mm.28524 NM_026585 ENSMUSG00000024104 Washc2 A130095H06|C530005J20Rik|D6Wsu116e|Fam21 WASH complex subunit 2 protein-coding common_peak1_179_1913_-0.322971854548681_10.7408891872117_9.57176270770101 chr11 116438881 116441198 + 9.57176270770101 NA TTS (NM_176902) TTS (NM_176902) 5826 NR_003376 664849 Mm.258466 NR_003376 Gm7367 EG664849 1110014K08Rik pseudogene pseudo common_peak2_175_1866_-0.326871535973183_10.7030704442396_9.57141879508187 chr8 104533671 104536337 + 9.57141879508187 NA promoter-TSS (NM_144931) promoter-TSS (NM_144931) 304 NM_001301164 12354 Mm.129265 NM_053070 ENSMUSG00000031883 Car7 AV343731|Ca7 carbonic anhydrase 7 protein-coding common_peak1_130_1355_-0.388054201289471_10.2111143624916_9.57043474949816 chr6 86668519 86670168 + 9.57043474949816 NA promoter-TSS (NM_010751) promoter-TSS (NM_010751) -184 NM_010751 17119 Mm.279580 NM_010751 ENSMUSG00000001156 Mxd1 AW122478|Mad|Mad1 MAX dimerization protein 1 protein-coding common_peak2_74_756_-0.533999781696066_9.2971495991377_9.56982873819382 chr17 24548609 24550890 + 9.56982873819382 NA promoter-TSS (NM_013630) promoter-TSS (NM_013630) -201 NM_013630 18763 Mm.30435 NM_013630 ENSMUSG00000032855 Pkd1 PC1|mFLJ00285 polycystic kidney disease 1 homolog protein-coding common_peak2_101_528_0.527159176199786_9.31070350021392_9.56939737479744 chr14 55744996 55746749 + 9.56939737479744 NA promoter-TSS (NM_026819) promoter-TSS (NM_026819) 179 NM_026403 67842 Mm.180338 NM_026403 ENSMUSG00000019297 Nop9 2610027L16Rik NOP9 nucleolar protein protein-coding common_peak2_71_312_0.667891137312761_8.623964415589_9.56930103771681 chr4 107313610 107315029 + 9.56930103771681 NA promoter-TSS (NM_001205156) promoter-TSS (NM_001205156) -44 NM_145550 230584 Mm.29118 NM_145550 ENSMUSG00000057375 Yipf1 C030002N13Rik Yip1 domain family, member 1 protein-coding common_peak1_150_1579_-0.357188458078914_10.447114614025_9.56916495843704 chr7 97579880 97581050 + 9.56916495843704 NA promoter-TSS (NM_183251) promoter-TSS (NM_183251) 569 NM_001081267 233532 Mm.43977 NM_001081267 ENSMUSG00000035623 Rsf1 4832420A03Rik|C030033M12Rik|Gm164|Hbxap|XAP8|p325 remodeling and spacing factor 1 protein-coding common_peak2_149_921_0.408139079046686_10.0526924799527_9.56908655746365 chr18 23751612 23755062 + 9.56908655746365 NA promoter-TSS (NM_001162941) promoter-TSS (NM_001162941) -388 NM_001162941 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak2_149_921_0.408139079046686_10.0526924799527_9.56908655746365-2 chr5 110779219 110781351 + 9.56908655746365 NA exon (NM_019700, exon 1 of 6) exon (NM_019700, exon 1 of 6) 311 NM_019700 56361 Mm.23528 NM_019700 ENSMUSG00000029507 Pus1 A730013B20Rik|MPUS1|mPus1p pseudouridine synthase 1 protein-coding common_peak1_20_229_-1.06801540714588_7.31148234737144_9.56802165814787 chr5 149229220 149229633 + 9.56802165814787 NA Intergenic CpG -35578 NM_001308462 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding common_peak1_65_664_-0.573278271541316_9.09057139461789_9.56410323538211 chr11 34033701 34034890 + 9.56410323538211 NA Intergenic Intergenic -12906 NM_010696 16822 Mm.265350 NM_010696 ENSMUSG00000002699 Lcp2 AI323664|BB161688|SLP-76|SLP76|m1Khoe|twm lymphocyte cytosolic protein 2 protein-coding common_peak1_133_1388_-0.382674872645312_10.2484934476587_9.56343486220659 chr7 110061663 110062600 + 9.56343486220659 NA intron (NM_009281, intron 1 of 15) CpG 429 NM_009281 20841 Mm.10815 NM_009281 ENSMUSG00000061079 Zfp143 AA959806|AU015869|D7Ertd805e|KRAB14|SBF|Staf|Zfp79|Zfp80-rs1|Znf143|pHZ-1 zinc finger protein 143 protein-coding common_peak2_78_360_0.626244064226146_8.80897705900024_9.56309919811565 chr5 38038411 38040103 + 9.56309919811565 NA promoter-TSS (NM_026959) promoter-TSS (NM_026959) 27 NM_026959 71116 Mm.18959 NM_026959 ENSMUSG00000029125 Stx18 1810035L21Rik|4933425D03Rik|AU041562 syntaxin 18 protein-coding common_peak1_561_5478_0.174506910081437_12.5069503433467_9.56210988320187 chr6 114917545 114922241 + 9.56210988320187 NA intron (NM_177683, intron 1 of 4) intron (NM_177683, intron 1 of 4) 1859 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_379_3276_0.223534455105161_11.7899271850953_9.55938780195739 chr19 10990970 10994184 + 9.55938780195739 NA intron (NM_001034898, intron 1 of 6) intron (NM_001034898, intron 1 of 6) 673 NM_001034898 545279 Mm.329729 NM_001034898 ENSMUSG00000067571 Ms4a15 E530011F12Rik|Gm1286 membrane-spanning 4-domains, subfamily A, member 15 protein-coding common_peak1_58_594_-0.611219453153481_8.91113613161857_9.55171393174528 chr5 33017957 33018728 + 9.55171393174528 NA promoter-TSS (NM_011738) promoter-TSS (NM_011738) -474 NM_011738 22629 Mm.332314 NM_011738 ENSMUSG00000018965 Ywhah - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide protein-coding common_peak1_225_1629_0.311475560240318_10.8263940292386_9.54932345944339 chr2 35495161 35497337 + 9.54932345944339 NA Intergenic Intergenic -34800 NM_001145821 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak1_142_1489_-0.368906268767097_10.356643480966_9.54621470939625 chr2 30065635 30067296 + 9.54621470939625 NA promoter-TSS (NM_001204875) promoter-TSS (NM_001204875) -9 NM_001204875 56086 Mm.326055 NM_023871 ENSMUSG00000054766 Set 2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I SET nuclear oncogene protein-coding unique_peak1_26_57_1.36422657171202_6.54009428098358_9.5461824731593 chr16 75906215 75906824 + 9.5461824731593 NA intron (NM_023380, intron 1 of 7) B4|SINE|B4 2747 NM_023380 67742 Mm.131406 NM_023380 ENSMUSG00000022876 Samsn1 4930571B16Rik|930571B16Rik|Hacs1|SLy2 SAM domain, SH3 domain and nuclear localization signals, 1 protein-coding common_peak1_55_563_-0.626374291194512_8.82636420680154_9.54546586865555 chr17 56325942 56326683 + 9.54546586865555 NA intron (NM_172132, intron 1 of 22) CpG 262 NM_172132 193796 Mm.45047 NM_172132 ENSMUSG00000024201 Kdm4b 4732474L06Rik|Jmjd2b|mKIAA0876 lysine (K)-specific demethylase 4B protein-coding common_peak1_319_3634_-0.230156176430757_11.7126615605916_9.54186443441405 chr5 137784976 137787737 + 9.54186443441405 NA 5' UTR (NM_144913, exon 1 of 4) 5' UTR (NM_144913, exon 1 of 4) 345 NM_144913 231803 Mm.61193 NM_144913 ENSMUSG00000029726 Mepce Bcdin3|D5Wsu46e methylphosphate capping enzyme protein-coding common_peak2_134_1399_-0.380897958114414_10.2607621327751_9.54147475778341 chrX 57336408 57339666 + 9.54147475778341 NA intron (NM_152801, intron 1 of 21) intron (NM_152801, intron 1 of 21) 692 NM_152801 73341 Mm.261443 NM_152801 ENSMUSG00000031133 Arhgef6 1600028C08Rik|1700038J06Rik|4930592P22Rik|alpha-PIX Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak2_54_553_-0.632451147663273_8.79751659221755_9.54020980124296 chr11 54801590 54803554 + 9.54020980124296 NA Intergenic B4A|SINE|B4 -14869 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding common_peak2_54_553_-0.632451147663273_8.79751659221755_9.54020980124296-2 chr8 70505901 70507201 + 9.54020980124296 NA exon (NM_025577, exon 2 of 5) exon (NM_025577, exon 2 of 5) 188 NM_025577 66462 Mm.28242 NM_025577 ENSMUSG00000058833 2810428I15Rik - RIKEN cDNA 2810428I15 gene protein-coding common_peak2_54_553_-0.632451147663273_8.79751659221755_9.54020980124296-3 chrX 152015727 152017757 + 9.54020980124296 NA promoter-TSS (NM_025660) promoter-TSS (NM_025660) 314 NM_019710 24061 Mm.482095 NM_019710 ENSMUSG00000041133 Smc1a 5830426I24Rik|SMC-1A|Sb1.8|Smc1|Smc1alpha|Smc1l1|Smcb|mKIAA0178 structural maintenance of chromosomes 1A protein-coding unique_peak2_60_241_0.745656213772378_8.29169134416078_9.5400444904946 chr3 75929645 75931093 + 9.5400444904946 NA intron (NM_001291069, intron 1 of 15) RMER15|LTR|ERVL 26580 NM_175193 73124 Mm.249232 NM_175193 ENSMUSG00000034109 Golim4 3110027H23Rik|GIMPC|GPP130|Golph4|P138 golgi integral membrane protein 4 protein-coding common_peak1_45_465_-0.699113029374415_8.51462962996707_9.53749806654707 chr11 22840884 22841660 + 9.53749806654707 NA intron (NM_001169114, intron 1 of 1) intron (NM_001169114, intron 1 of 1) 18463 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak2_45_465_-0.699113029374415_8.51462962996707_9.53749806654707 chr6 70823303 70825306 + 9.53749806654707 NA Intergenic Intergenic -20211 NM_010121 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak1_172_1126_0.370938731320328_10.3237411658324_9.53696229918281 chr2 158719488 158720968 + 9.53696229918281 NA intron (NM_153089, intron 2 of 10) ID4|SINE|ID -47871 NM_027975 71878 Mm.85162 NM_027975 ENSMUSG00000027654 Fam83d 2310007D09Rik|BB104611 family with sequence similarity 83, member D protein-coding unique_peak2_5_92_-1.97860796538865_5.54985482841371_9.53693265923291 chr12 21471978 21472712 + 9.53693265923291 NA Intergenic G-rich|Low_complexity|Low_complexity -54909 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_53_543_-0.638642963224388_8.76814135963815_9.536717499931 chr3 14885999 14886589 + 9.536717499931 NA promoter-TSS (NM_009801) promoter-TSS (NM_009801) -132 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding common_peak2_116_646_0.479456063768637_9.57734993387683_9.53652634620126 chr8 104630325 104632586 + 9.53652634620126 NA promoter-TSS (NM_019662) promoter-TSS (NM_019662) -134 NM_019662 56437 Mm.29467 NM_019662 ENSMUSG00000031880 Rrad REM3|Rad Ras-related associated with diabetes protein-coding common_peak2_82_838_-0.503021131271476_9.46101643480409_9.53632821225909 chr13 21786241 21788093 + 9.53632821225909 NA promoter-TSS (NM_001290466) promoter-TSS (NM_001290466) 51 NM_178184 319170 NM_178184 ENSMUSG00000069309 Hist1h2an - histone cluster 1, H2an protein-coding common_peak2_68_694_-0.558273847364076_9.16173224392883_9.53559099761233 chr1 182254259 182256279 + 9.53559099761233 NA Intergenic HAL1|LINE|L1 27490 NM_007853 13244 Mm.29648 NM_007853 ENSMUSG00000038633 Degs1 AA536663|Degs|Des1|Mdes delta(4)-desaturase, sphingolipid 1 protein-coding common_peak2_30_75_1.21875469129072_6.85730485908895_9.52851552645535 chr9 121380850 121381465 + 9.52851552645535 NA intron (NM_175114, intron 1 of 15) intron (NM_175114, intron 1 of 15) 14199 NM_175114 67095 Mm.491112 NM_175114 ENSMUSG00000032536 Trak1 2310001H13Rik|AI413908|AI467545|hyrt|mKIAA1042 trafficking protein, kinesin binding 1 protein-coding common_peak1_128_744_0.448765071057709_9.76547915087838_9.52829967012553 chr5 139371505 139372563 + 9.52829967012553 NA intron (NM_028469, intron 2 of 4) intron (NM_028469, intron 2 of 4) -2289 NR_029768 723898 NR_029768 ENSMUSG00000065593 Mir339 Mirn339|mir-339|mmu-mir-339 microRNA 339 ncRNA common_peak1_48_494_-0.674408478056288_8.61408047593883_9.52652117265611 chr2 121456557 121457549 + 9.52652117265611 NA promoter-TSS (NM_001025371) promoter-TSS (NM_001025371) -35 NM_026318 67693 Mm.330525 NM_026318 ENSMUSG00000027245 Hypk 2310003F16Rik|HSPC136 huntingtin interacting protein K protein-coding common_peak1_290_2295_0.264565952841005_11.2971899030962_9.52624150141339 chr1 176812913 176815323 + 9.52624150141339 NA promoter-TSS (NM_029756) promoter-TSS (NM_029756) -542 NM_029756 76816 Mm.171399 NM_029756 ENSMUSG00000026504 Sdccag8 2700048G21Rik|5730470G24Rik|Cccap serologically defined colon cancer antigen 8 protein-coding common_peak1_75_765_-0.527611756155354_9.31739470384728_9.52601097415282 chr7 5038192 5038922 + 9.52601097415282 NA promoter-TSS (NM_001039532) promoter-TSS (NM_001039532) -111 NM_001039532 654801 Mm.333548 NM_001039532 ENSMUSG00000043290 Zfp784 C730049F21Rik|Znf784 zinc finger protein 784 protein-coding common_peak2_229_1669_0.307546314796769_10.8594055447598_9.52542770566655 chr17 84002609 84005416 + 9.52542770566655 NA intron (NR_130994, intron 1 of 1) MLT1J-int|LTR|ERVL-MaLR 5460 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak1_17_201_-1.15352612087913_7.08144842231223_9.5251703493461-2 chr15 102350374 102350733 + 9.5251703493461 NA exon (NM_153416, exon 1 of 16) exon (NM_153416, exon 1 of 16) 206 NM_153416 223921 Mm.352946 NM_153416 ENSMUSG00000036678 Aaas AAA|ADRACALA|D030041N15Rik|GL003 achalasia, adrenocortical insufficiency, alacrimia protein-coding common_peak1_17_201_-1.15352612087913_7.08144842231223_9.5251703493461-3 chr4 148085229 148085676 + 9.5251703493461 NA intron (NM_001301281, intron 1 of 4) intron (NM_001301281, intron 1 of 4) 2612 NM_009642 11610 Mm.46247 NM_009642 ENSMUSG00000029007 Agtrap 3300002E14Rik|AT1R|Atrap|D4Wsu124e angiotensin II, type I receptor-associated protein protein-coding common_peak1_17_201_-1.15352612087913_7.08144842231223_9.5251703493461 chr15 96697920 96698375 + 9.5251703493461 NA intron (NM_175121, intron 3 of 15) intron (NM_175121, intron 3 of 15) 1551 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_165_1063_0.380835744853515_10.2457003079279_9.52491554581512 chr2 163418453 163419608 + 9.52491554581512 NA intron (NM_025699, intron 1 of 3) CpG 440 NM_025699 66680 Mm.25119 NM_025699 ENSMUSG00000035399 Oser1 3230401D17Rik|AI256769|Perit1 oxidative stress responsive serine rich 1 protein-coding common_peak1_27_293_-0.913107594818438_7.74311854742714_9.52454104534964 chr11 6521692 6522504 + 9.52454104534964 NA Intergenic Intergenic -1140 NM_178440 246177 Mm.239554 NM_178440 ENSMUSG00000020437 Myo1g E430002D17Rik myosin IG protein-coding common_peak2_42_135_0.958264329003612_7.56659500575214_9.52230832704114 chr9 56532570 56533639 + 9.52230832704114 NA Intergenic RSINE1|SINE|B4 102544 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding common_peak1_29_312_-0.881362414334915_7.84933763976516_9.52136544263821 chr19 34192685 34193193 + 9.52136544263821 NA intron (NM_029682, intron 1 of 10) intron (NM_029682, intron 1 of 10) 669 NM_029682 76630 Mm.130952 NM_029682 ENSMUSG00000024776 Stambpl1 1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP STAM binding protein like 1 protein-coding common_peak1_106_567_0.509223299851092_9.40435876943023_9.52103795314524 chr1 127676914 127678277 + 9.52103795314524 NA exon (NM_028135, exon 1 of 8) exon (NM_028135, exon 1 of 8) 426 NM_028135 72160 Mm.281287 NM_028135 ENSMUSG00000026347 Tmem163 2610024A01Rik|SV31 transmembrane protein 163 protein-coding common_peak1_41_130_0.970663953447405_7.51875497826115_9.52094335133743 chr10 76344618 76345322 + 9.52094335133743 NA intron (NM_001081419, intron 1 of 37) CpG 321 NM_001081419 64451 Mm.33183 NM_001081419 ENSMUSG00000020231 Dip2a 4931420H10Rik|AI426328|Dip2|Kiaa0184-hp|mKIAA0184 disco interacting protein 2 homolog A protein-coding common_peak2_315_2564_0.250580602991612_11.4500334119902_9.52068579921893 chr19 7556989 7562277 + 9.52068579921893 NA intron (NM_139269, intron 2 of 4) B1_Mur4|SINE|Alu 2174 NM_139269 225845 Mm.274810 NM_139269 ENSMUSG00000060675 Pla2g16 C78643|HRSL3|Hrasls3|Hrev107|MLP-3 phospholipase A2, group XVI protein-coding common_peak2_33_89_1.13829547583085_7.0610008342451_9.5199526517511 chr11 84129014 84129749 + 9.5199526517511 NA intron (NM_172562, intron 1 of 15) intron (NM_172562, intron 1 of 15) 187 NM_172562 217031 Mm.45159 NM_172562 ENSMUSG00000018651 Tada2a AV319371|D030022J10Rik|Tada2l transcriptional adaptor 2A protein-coding common_peak1_33_89_1.13829547583085_7.0610008342451_9.5199526517511 chr7 3414771 3415511 + 9.5199526517511 NA promoter-TSS (NR_128566) promoter-TSS (NR_128566) 75 NR_128566 104795667 NR_128566 ENSMUSG00000094210 Gm23450 Mir935|mmu-mir-935 predicted gene, 23450 ncRNA common_peak2_77_354_0.627880546402173_8.78561548759313_9.51744940737271 chr12 100836597 100838115 + 9.51744940737271 NA intron (NM_145448, intron 3 of 12) ORR1F|LTR|ERVL-MaLR 58233 NM_145448 217830 Mm.218590 NM_145448 ENSMUSG00000021185 9030617O03Rik - RIKEN cDNA 9030617O03 gene protein-coding common_peak1_130_1354_-0.386989874394361_10.2105821990441_9.51611449919248 chr5 52189242 52190639 + 9.51611449919248 NA promoter-TSS (NR_015537) promoter-TSS (NR_015537) 606 NM_001042620 13204 Mm.993 NM_007839 ENSMUSG00000029169 Dhx15 DBP1|DEAH9|Ddx15|HRH2|mDEAH9 DEAH (Asp-Glu-Ala-His) box polypeptide 15 protein-coding unique_peak2_50_514_-0.660757844943124_8.67804969959902_9.51560684714751 chr10 120651374 120653680 + 9.51560684714751 NA Intergenic Intergenic -113205 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_247_2727_-0.267108790730799_11.2800735336588_9.51479678667325 chr6 117906734 117908445 + 9.51479678667325 NA promoter-TSS (NM_001166429) intron (NM_133834, intron 1 of 3) -215 NM_001166428 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_16_192_-1.18892077629391_6.99799664912113_9.51388736053089 chr2 166649441 166649867 + 9.51388736053089 NA intron (NM_177782, intron 1 of 39) intron (NM_177782, intron 1 of 39) -23064 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_16_192_-1.18892077629391_6.99799664912113_9.51388736053089-2 chr7 44901401 44901815 + 9.51388736053089 NA TTS (NM_027376) TTS (NM_027376) 5529 NM_027376 70300 Mm.276298 NM_027376 ENSMUSG00000011658 Fuz 2600013E07Rik|b2b1273Clo fuzzy planar cell polarity protein protein-coding common_peak2_203_1416_0.332271356582151_10.6347597212091_9.51106471716014 chr4 46588884 46595067 + 9.51106471716014 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) 9954 NM_001164804 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak1_28_66_1.2825741240548_6.70737625248517_9.5110528104898 chr5 29861025 29861553 + 9.5110528104898 NA intron (NR_105781, intron 1 of 2) intron (NR_105781, intron 1 of 2) 72278 NR_105781 102465962 NR_105781 ENSMUSG00000098448 Mir6362 Gm27812|mmu-mir-6362 microRNA 6362 ncRNA common_peak1_39_407_-0.754678803154363_8.29508594039431_9.51093208007674 chr5 138155192 138155854 + 9.51093208007674 NA intron (NM_019747, intron 1 of 4) CpG 221 NM_019747 56314 Mm.19274 NM_019747 ENSMUSG00000037007 Zfp113 4732456B05Rik|mKIAA4229 zinc finger protein 113 protein-coding common_peak2_213_2314_-0.29121374760547_11.0311896043449_9.51063352624582 chr6 87913060 87917275 + 9.51063352624582 NA intron (NM_173737, intron 2 of 6) intron (NM_173737, intron 2 of 6) 1191 NM_173737 232210 Mm.246241 NM_173737 ENSMUSG00000030060 Hmces 8430410A17Rik|C85376 5-hydroxymethylcytosine (hmC) binding, ES cell specific protein-coding unique_peak2_25_275_-0.953103212137236_7.63197285070955_9.50942656206943 chr3 106966282 106967908 + 9.50942656206943 NA Intergenic MLT1C|LTR|ERVL-MaLR -69067 NM_008418 16491 Mm.30640 NM_008418 ENSMUSG00000047959 Kcna3 Kca1-3|Kv1.3|Mk-3 potassium voltage-gated channel, shaker-related subfamily, member 3 protein-coding common_peak1_25_275_-0.953103212137236_7.63197285070955_9.50942656206943 chr16 11448159 11448757 + 9.50942656206943 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 42810 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak2_155_975_0.395430734417687_10.1284527047717_9.50801533053023 chr9 32717075 32723530 + 9.50801533053023 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 24260 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_250_2764_-0.265266284308071_11.300430622968_9.50432385129179 chr4 134493833 134498303 + 9.50432385129179 NA promoter-TSS (NM_027995) promoter-TSS (NM_027995) -693 NM_001285845 71904 Mm.142343 NM_027995 ENSMUSG00000037348 Paqr7 2310021M12Rik|AV001994|BB007237|Mpra|PGLP|mPR progestin and adipoQ receptor family member VII protein-coding common_peak1_32_340_-0.836307981363293_7.99547393834253_9.50297193766088 chr4 133675181 133675811 + 9.50297193766088 NA Intergenic Intergenic -2849 NM_001145956 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding unique_peak1_19_30_1.7369379172439_5.82266526900883_9.50162295657367-2 chr8 124261983 124262422 + 9.50162295657367 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 30808 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak1_19_30_1.7369379172439_5.82266526900883_9.50162295657367 chr11 60185533 60186025 + 9.50162295657367 NA exon (NM_009021, exon 3 of 6) exon (NM_009021, exon 3 of 6) 14838 NR_105886 102465555 NR_105886 ENSMUSG00000098547 Mir6921 Gm27352|mmu-mir-6921 microRNA 6921 ncRNA common_peak2_56_216_0.782947487105694_8.15302497599733_9.49919332538765 chr5 97110951 97112016 + 9.49919332538765 NA 5' UTR (NM_198422, exon 1 of 7) 5' UTR (NM_198422, exon 1 of 7) 113 NM_198422 231474 Mm.332505 NM_198422 ENSMUSG00000055725 Paqr3 6330415A20Rik|AY424292|RKTG progestin and adipoQ receptor family member III protein-coding common_peak2_74_755_-0.532092715931405_9.29619606625537_9.49726502684988 chr2 103565447 103567785 + 9.49726502684988 NA 5' UTR (NM_178890, exon 1 of 17) 5' UTR (NM_178890, exon 1 of 17) 306 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak1_76_347_0.633778044924338_8.7598325183109_9.49334341571031 chr7 28435535 28436452 + 9.49334341571031 NA intron (NM_175021, intron 1 of 12) CpG 198 NM_175021 233033 Mm.54120 NM_175021 ENSMUSG00000109336 Samd4b BC042901 sterile alpha motif domain containing 4B protein-coding common_peak1_21_237_-1.03502002061399_7.37730775300095_9.4926322178651 chr11 46474441 46474925 + 9.4926322178651 NA intron (NM_134250, intron 5 of 6) L2b|LINE|L2 19752 NM_134250 171285 Mm.72168 NM_134250 ENSMUSG00000020399 Havcr2 TIM-3|Tim3|Timd3 hepatitis A virus cellular receptor 2 protein-coding unique_peak2_21_237_-1.03502002061399_7.37730775300095_9.4926322178651 chr17 30363639 30364894 + 9.4926322178651 NA intron (NM_172618, intron 6 of 11) intron (NM_172618, intron 6 of 11) 31914 NR_030688 623169 Mm.440508 NR_030688 Gm6402 EG623169 ribosomal protein S17 pseudogene pseudo common_peak2_64_267_0.710825329875124_8.42150185539533_9.49251916249415 chr4 137861366 137862826 + 9.49251916249415 NA promoter-TSS (NM_199307) promoter-TSS (NM_199307) -141 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding common_peak1_110_1135_-0.425828952139986_9.93683264343469_9.48893533073822 chr3 30875793 30877687 + 9.48893533073822 NA intron (NM_001286994, intron 1 of 3) intron (NM_001286994, intron 1 of 3) 20790 NM_001286994 71862 Mm.272019 NM_027965 ENSMUSG00000037661 Gpr160 1700025D19Rik|GPCR150 G protein-coupled receptor 160 protein-coding common_peak1_83_848_-0.498921477381828_9.48016000486212_9.48864355238023 chr2 69789326 69790301 + 9.48864355238023 NA promoter-TSS (NM_028521) promoter-TSS (NM_028521) 76 NM_028521 73373 Mm.9621 NM_028521 ENSMUSG00000027088 Phospho2 1700048E23Rik|AI661517|AU021728|AV006103|Phos2 phosphatase, orphan 2 protein-coding unique_peak2_12_155_-1.35659328540767_6.60710557615841_9.48803196253477 chr5 121501143 121502400 + 9.48803196253477 NA exon (NM_172125, exon 1 of 1) exon (NM_172125, exon 1 of 1) 1209 NM_172125 280667 Mm.444773 NM_172125 ENSMUSG00000062438 Adam1b Adam1|Ftna a disintegrin and metallopeptidase domain 1b protein-coding unique_peak2_12_155_-1.35659328540767_6.60710557615841_9.48803196253477-2 chr7 141435399 141436107 + 9.48803196253477 NA intron (NM_026646, intron 1 of 9) intron (NM_026646, intron 1 of 9) -1159 NM_001177576 68267 Mm.33729 NM_026646 ENSMUSG00000019082 Slc25a22 1300006L01Rik|AI060884|Gc1 solute carrier family 25 (mitochondrial carrier, glutamate), member 22 protein-coding common_peak1_102_1049_-0.444625728776746_9.81386074816511_9.48628378145496 chr11 98474319 98476360 + 9.48628378145496 NA intron (NM_011771, intron 7 of 7) intron (NM_011771, intron 7 of 7) 28505 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak2_248_1860_0.291778045262481_11.0077513626904_9.48556944091906 chr2 158732380 158736524 + 9.48556944091906 NA intron (NM_153089, intron 2 of 10) intron (NM_153089, intron 2 of 10) -33647 NM_027975 71878 Mm.85162 NM_027975 ENSMUSG00000027654 Fam83d 2310007D09Rik|BB104611 family with sequence similarity 83, member D protein-coding unique_peak1_23_45_1.49021351203508_6.26866871207455_9.48531578851793 chr13 51115003 51115428 + 9.48531578851793 NA intron (NM_001283029, intron 1 of 5) RCHARR1|DNA|hAT-Charlie 13668 NM_001283029 20729 Mm.188432 NM_011462 ENSMUSG00000021395 Spin1 Spin spindlin 1 protein-coding common_peak1_23_45_1.49021351203508_6.26866871207455_9.48531578851793 chr1 164247920 164248342 + 9.48531578851793 NA promoter-TSS (NM_001276455) promoter-TSS (NM_001276455) -915 NM_054087 116914 Mm.35444 NM_054087 ENSMUSG00000040918 Slc19a2 AV276020|AW322295|DDA1|THTR1|TRMA solute carrier family 19 (thiamine transporter), member 2 protein-coding unique_peak1_23_45_1.49021351203508_6.26866871207455_9.48531578851793-2 chr13 92844629 92845187 + 9.48531578851793 NA intron (NM_001162945, intron 1 of 8) CpG 121 NM_001162945 382793 Mm.296770 NM_001162945 ENSMUSG00000021704 Mtx3 4930470O13Rik|AA409304|AI853833|AU067765|EG624619|Gm1194|Gm6514 metaxin 3 protein-coding common_peak1_79_368_0.616881843943093_8.83591792803194_9.48516087133114 chr16 64836330 64837262 + 9.48516087133114 NA Intergenic Intergenic -15289 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak1_69_703_-0.551373592927407_9.18374482217359_9.48394940053013-2 chr8 4213392 4214397 + 9.48394940053013 NA exon (NM_207203, exon 6 of 7) exon (NM_207203, exon 6 of 7) 3418 NM_207203 73072 Mm.477379 NM_207203 ENSMUSG00000064125 Prr36 - proline rich 36 protein-coding common_peak1_69_703_-0.551373592927407_9.18374482217359_9.48394940053013 chr10 127107221 127108711 + 9.48394940053013 NA intron (NM_001171026, intron 5 of 14) ID_B1|SINE|B4 13194 NM_177614 216440 Mm.295246 NM_177614 ENSMUSG00000040462 Os9 4632413K17Rik|AU022351 amplified in osteosarcoma protein-coding common_peak1_73_744_-0.534700652951758_9.27374628887365_9.48382523522121 chrX 74023302 74024429 + 9.48382523522121 NA promoter-TSS (NM_008363) promoter-TSS (NM_008363) 53 NM_001177975 16179 Mm.38241 NM_008363 ENSMUSG00000031392 Irak1 AA408924|IRAK|IRAK-1|IRAK1-S|IRAK1b|Il1rak|Plpk|mPLK interleukin-1 receptor-associated kinase 1 protein-coding common_peak2_164_1055_0.381031415180747_10.2349098269488_9.47822950744265 chr10 40300614 40303291 + 9.47822950744265 NA 5' UTR (NM_007444, exon 1 of 8) 5' UTR (NM_007444, exon 1 of 8) 234 NM_007444 100041585 Mm.476925 NM_007444 ENSMUSG00000063953 Amd2 AdoMetDC|Amd1|Amd3|ENSMUSG00000063953 S-adenosylmethionine decarboxylase 2 protein-coding common_peak1_42_435_-0.722457154522976_8.40695574751544_9.4777145874585 chr14 50785057 50785657 + 9.4777145874585 NA intron (NM_001080949, intron 1 of 9) intron (NM_001080949, intron 1 of 9) 163 NM_177625 219022 Mm.276362 NM_177625 ENSMUSG00000006288 Ttc5 - tetratricopeptide repeat domain 5 protein-coding common_peak2_206_2229_-0.296098158407588_10.9747789156039_9.47364067815978 chr6 54865355 54869882 + 9.47364067815978 NA intron (NM_199143, intron 2 of 4) intron (NM_199143, intron 2 of 4) 50702 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_38_114_1.02745339866349_7.35921675027612_9.4735552796506 chr17 24220039 24220749 + 9.4735552796506 NA intron (NM_028056, intron 2 of 9) intron (NM_028056, intron 2 of 9) 375 NM_028056 72016 Mm.23881 NM_028056 ENSMUSG00000024118 1600002H07Rik - RIKEN cDNA 1600002H07 gene protein-coding common_peak1_38_114_1.02745339866349_7.35921675027612_9.4735552796506-2 chr5 31870626 31871259 + 9.4735552796506 NA intron (NM_181279, intron 8 of 13) MTEa|LTR|ERVL-MaLR 172892 NM_181282 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Bre 6030405P19Rik|AI429776|B830038C02Rik brain and reproductive organ-expressed protein protein-coding common_peak2_75_340_0.63996089674543_8.73360837739689_9.47036569594387 chr16 36930207 36931787 + 9.47036569594387 NA intron (NM_030035, intron 20 of 21) intron (NM_030035, intron 20 of 21) -3986 NM_008225 15163 Mm.4091 NM_008225 ENSMUSG00000022831 Hcls1 AW213261|HS1 hematopoietic cell specific Lyn substrate 1 protein-coding common_peak2_115_1189_-0.414857921310025_10.0093168975403_9.47018908382362 chr5 124628122 124630213 + 9.47018908382362 NA 5' UTR (NM_011596, exon 1 of 20) 5' UTR (NM_011596, exon 1 of 20) 115 NM_011596 21871 Mm.1158 NM_011596 ENSMUSG00000038023 Atp6v0a2 8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2 ATPase, H+ transporting, lysosomal V0 subunit A2 protein-coding common_peak2_76_775_-0.523191301414061_9.3383171914801_9.46955907469632 chr3 95624287 95625928 + 9.46955907469632 NA 5' UTR (NM_019561, exon 1 of 4) 5' UTR (NM_019561, exon 1 of 4) 127 NM_001026212 56205 Mm.241365 NM_019561 ENSMUSG00000038619 Ensa 1700020C18Rik|2610007F17Rik|AI451924 endosulfine alpha protein-coding unique_peak1_20_34_1.64819162685353_5.95337883037173_9.46862905640274-3 chr2 151977903 151978365 + 9.46862905640274 NA intron (NM_146127, intron 1 of 1) intron (NM_146127, intron 1 of 1) 2085 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding unique_peak1_20_34_1.64819162685353_5.95337883037173_9.46862905640274-4 chr4 139217573 139218126 + 9.46862905640274 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 23738 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_20_34_1.64819162685353_5.95337883037173_9.46862905640274 chr5 64819618 64820100 + 9.46862905640274 NA intron (NM_008453, intron 2 of 5) intron (NM_008453, intron 2 of 5) 16336 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding unique_peak1_20_34_1.64819162685353_5.95337883037173_9.46862905640274-2 chr14 27387204 27387768 + 9.46862905640274 NA intron (NM_001289688, intron 6 of 9) RMER13B|LTR|ERVK 26097 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak1_20_34_1.64819162685353_5.95337883037173_9.46862905640274 chr11 69837135 69837597 + 9.46862905640274 NA Intergenic CpG -1159 NM_026982 69186 Mm.248772 NM_026982 ENSMUSG00000070394 Tmem256 1810027O10Rik|3110009M16Rik transmembrane protein 256 protein-coding unique_peak2_6_101_-1.83908521432628_5.75288273480836_9.46829432320941 chr12 118298549 118299308 + 9.46829432320941 NA exon (NM_001166385, exon 3 of 6) exon (NM_001166385, exon 3 of 6) 2512 NM_009239 20688 Mm.34699 NM_009239 ENSMUSG00000025323 Sp4 5730497N03Rik|HF-1b|HF1-b trans-acting transcription factor 4 protein-coding common_peak1_82_837_-0.501300564531004_9.46015615143385_9.4674975775238 chr4 156032115 156033738 + 9.4674975775238 NA Intergenic Intergenic 6584 NM_021985 21936 Mm.3180 NM_009400 ENSMUSG00000041954 Tnfrsf18 AITR|Gitr tumor necrosis factor receptor superfamily, member 18 protein-coding common_peak1_52_192_0.823284728175032_8.0040994013556_9.46749442092636 chr11 97828119 97828833 + 9.46749442092636 NA intron (NM_010688, intron 4 of 6) intron (NM_010688, intron 4 of 6) -12304 NM_001080935 68127 Mm.110270 NM_001080935 ENSMUSG00000050538 B230217C12Rik AI840637 RIKEN cDNA B230217C12 gene protein-coding common_peak1_180_1923_-0.32068576829368_10.7495501996232_9.46717692322448 chr2 163643991 163645390 + 9.46717692322448 NA promoter-TSS (NR_028113) promoter-TSS (NR_028113) -160 NR_028113 68386 Mm.410649 NR_028113 ENSMUSG00000058812 0610039K10Rik - RIKEN cDNA 0610039K10 gene ncRNA unique_peak1_13_12_2.35951272069048_4.88019607848633_9.46704617470048-3 chr4 126237683 126237984 + 9.46704617470048 NA intron (NM_001145970, intron 5 of 16) intron (NM_001145970, intron 5 of 16) 18486 NM_144941 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding unique_peak1_13_12_2.35951272069048_4.88019607848633_9.46704617470048 chr12 102675899 102676308 + 9.46704617470048 NA intron (NM_172584, intron 1 of 9) B1_Mur4|SINE|Alu 8917 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA unique_peak1_13_12_2.35951272069048_4.88019607848633_9.46704617470048-2 chr19 17251710 17252087 + 9.46704617470048 NA Intergenic ID_B1|SINE|B4 87607 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_90_921_-0.476277897709291_9.61048399157469_9.46693110156855 chr4 135068113 135069296 + 9.46693110156855 NA Intergenic Intergenic -51941 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak1_34_94_1.11159010619259_7.12565066142724_9.46687314499113 chr2 143915458 143916149 + 9.46687314499113 NA intron (NM_019771, intron 1 of 3) CpG 472 NM_019771 56431 Mm.28919 NM_019771 ENSMUSG00000015932 Dstn 2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p destrin protein-coding common_peak1_101_1037_-0.445307640044069_9.79693690833585_9.46518787272962 chr1 138157309 138159109 + 9.46518787272962 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 16917 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak2_79_806_-0.512066013274293_9.40039185664063_9.46448699346524 chr1 80664192 80666492 + 9.46448699346524 NA promoter-TSS (NM_001285927) promoter-TSS (NM_001285927) 10 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak1_28_302_-0.894510668960383_7.79591864899276_9.46303117649148 chr11 78535631 78536172 + 9.46303117649148 NA promoter-TSS (NM_018854) promoter-TSS (NM_018854) 359 NM_001159392 21927 Mm.386774 NM_009395 ENSMUSG00000017615 Tnfaip1 Bacurd2|Edp-1|Edp1|Tnfip1 tumor necrosis factor, alpha-induced protein 1 (endothelial) protein-coding common_peak2_62_254_0.727255723092925_8.35798129840532_9.46295893526015 chr2 29768668 29770028 + 9.46295893526015 NA Intergenic Intergenic 7820 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak2_44_454_-0.703544097521426_8.47795068632534_9.46173331587467 chr11 117871569 117873774 + 9.46173331587467 NA intron (NM_027919, intron 1 of 6) intron (NM_027919, intron 1 of 6) 855 NM_027919 71776 Mm.3200 NM_027919 ENSMUSG00000017713 Tha1 1300017K07Rik|GLY1 threonine aldolase 1 protein-coding common_peak2_157_1657_-0.346516889196078_10.5219698468977_9.46109850809476 chr12 102347761 102352188 + 9.46109850809476 NA intron (NM_001161365, intron 3 of 9) intron (NM_001161365, intron 3 of 9) 66333 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_105_1080_-0.435796731105182_9.86025244218206_9.46050463718164 chr10 128409986 128411557 + 9.46050463718164 NA promoter-TSS (NM_027257) promoter-TSS (NM_027257) -845 NR_104288 67588 Mm.294120 NM_026259 ENSMUSG00000025373 Rnf41 2210404G21Rik|4930511A05Rik|4933415P08Rik|D10Ertd722e|FLRF|Nrdp1 ring finger protein 41 protein-coding common_peak1_37_387_-0.772936327603881_8.21344467838519_9.46008049782906 chr10 12918741 12919416 + 9.46008049782906 NA intron (NR_038027, intron 3 of 3) B3|SINE|B2 4049 NR_038027 320273 Mm.417706 NR_038027 ENSMUSG00000097378 B230208H11Rik - RIKEN cDNA B230208H11 gene ncRNA common_peak1_37_387_-0.772936327603881_8.21344467838519_9.46008049782906-2 chr9 66598463 66599396 + 9.46008049782906 NA Intergenic Intergenic -5814 NM_001302122 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding common_peak2_144_1510_-0.364519043773939_10.3790284232779_9.45881368686291 chr15 3994979 3996915 + 9.45881368686291 NA promoter-TSS (NM_145930) promoter-TSS (NM_145930) -92 NR_045740 328489 Mm.447020 NR_045740 ENSMUSG00000097662 A630020A06 - uncharacterized A630020A06 ncRNA common_peak2_148_914_0.407297068936217_10.0412764676395_9.45835410172212 chr10 88388302 88391409 + 9.45835410172212 NA intron (NM_001004164, intron 1 of 20) intron (NM_001004164, intron 1 of 20) 10443 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak2_651_6649_0.157930441018166_12.778103845785_9.45733935547004 chr3 96485916 96490244 + 9.45733935547004 NA Intergenic RMER19B2|LTR|ERVK -35774 NM_001256180 329716 Mm.275223 NM_183223 ENSMUSG00000046317 BC107364 D730018G16 cDNA sequence BC107364 protein-coding common_peak1_280_2191_0.269559404240534_11.2328117850808_9.45317005079856 chr8 117032342 117035551 + 9.45317005079856 NA intron (NM_029686, intron 26 of 42) B1_Mus1|SINE|Alu -40497 NM_026572 68133 Mm.258462 NM_026572 ENSMUSG00000034424 Gcsh 1100001L02Rik|5730591C18Rik glycine cleavage system protein H (aminomethyl carrier) protein-coding common_peak2_53_542_-0.635988509778411_8.76681413291516_9.45140914797532 chr17 24885486 24886423 + 9.45140914797532 NA promoter-TSS (NM_001163751) promoter-TSS (NM_001163751) 396 NM_011956 26426 Mm.36718 NM_011956 ENSMUSG00000039183 Nubp2 D17Wsu11e nucleotide binding protein 2 protein-coding common_peak1_225_1631_0.309706467387263_10.8272785756651_9.45045927151949 chr5 106695484 106697097 + 9.45045927151949 NA intron (NM_026856, intron 1 of 6) CpG 540 NM_026856 52397 Mm.249474 NM_026856 ENSMUSG00000049606 Zfp644 1110068L01Rik|AA408882|BM-005|D5Ertd689e|Zep-2 zinc finger protein 644 protein-coding common_peak1_224_2445_-0.281924464084435_11.1152464564852_9.45001019114429 chr11 75459002 75461205 + 9.45001019114429 NA Intergenic Intergenic -1436 NR_030711 100042498 Mm.482242 NR_030711 ENSMUSG00000085148 Mir22hg 2210403K04Rik|mir-22 Mir22 host gene (non-protein coding) ncRNA common_peak1_48_169_0.867485300772983_7.84313358652419_9.44866516147076 chr10 39521353 39522286 + 9.44866516147076 NA intron (NM_008054, intron 5 of 13) intron (NM_008054, intron 5 of 13) -91115 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak2_324_3695_-0.226728934204843_11.7383845743136_9.44779389984162 chr15 27594878 27600217 + 9.44779389984162 NA Intergenic Intergenic 26053 NR_106065 102466808 NR_106065 ENSMUSG00000098416 Mir7117 Gm27729|mmu-mir-7117 microRNA 7117 ncRNA common_peak2_96_492_0.539894526985497_9.21539109987066_9.44696218809823 chr8 4492523 4494414 + 9.44696218809823 NA promoter-TSS (NM_026058) promoter-TSS (NM_026058) 63 NM_026058 67260 Mm.35511 NM_026058 ENSMUSG00000008206 Cers4 2900019C14Rik|Lass4|Trh1 ceramide synthase 4 protein-coding common_peak1_96_492_0.539894526985497_9.21539109987066_9.44696218809823 chr17 31789370 31790906 + 9.44696218809823 NA Intergenic (TC)n|Simple_repeat|Simple_repeat 65654 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak1_151_1589_-0.354609913215761_10.4575060935638_9.44688791922038 chr7 135604128 135606411 + 9.44688791922038 NA promoter-TSS (NM_001316679) promoter-TSS (NM_001316679) -559 NM_001316679 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_78_795_-0.514525529430333_9.37936185582848_9.44630807623317 chr2 26444526 26445262 + 9.44630807623317 NA intron (NM_153125, intron 1 of 29) CpG 322 NM_153125 227648 Mm.206371 NM_153125 ENSMUSG00000026924 Sec16a AU024582|C230052J16Rik SEC16 homolog A, endoplasmic reticulum export factor protein-coding common_peak1_114_1177_-0.41555743285863_9.99434510740114_9.44354512872359 chr10 123196043 123197515 + 9.44354512872359 NA intron (NM_001301628, intron 1 of 20) CpG 240 NM_027604 14479 Mm.244209 NM_027604 ENSMUSG00000020124 Usp15 4921514G19Rik|AI327321|E430033I05Rik|Gcap18 ubiquitin specific peptidase 15 protein-coding common_peak2_114_1177_-0.41555743285863_9.99434510740114_9.44354512872359 chr2 91053090 91055040 + 9.44354512872359 NA promoter-TSS (NM_008948) promoter-TSS (NM_008948) 49 NM_008948 19182 Mm.289832 NM_008948 ENSMUSG00000002102 Psmc3 TBP-1 proteasome (prosome, macropain) 26S subunit, ATPase 3 protein-coding common_peak1_31_80_1.1830155714269_6.93135778859807_9.44319055042984 chr17 31787344 31788050 + 9.44319055042984 NA Intergenic RMER17B|LTR|ERVK 68095 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak2_89_910_-0.478516295051064_9.59204909627652_9.44118262632768 chr1 58444492 58446900 + 9.44118262632768 NA promoter-TSS (NM_027351) promoter-TSS (NM_027351) -210 NM_001285827 70225 Mm.340195 NM_027351 ENSMUSG00000026035 Ppil3 2310076N22Rik|2510026K04Rik|Cyp10l peptidylprolyl isomerase (cyclophilin)-like 3 protein-coding common_peak2_46_158_0.890248132141662_7.75800702135519_9.44044697199143-2 chr17 32924714 32925365 + 9.44044697199143 NA intron (NM_130882, intron 12 of 12) intron (NM_130882, intron 12 of 12) -7697 NM_001204336 64385 Mm.486449 NM_022434 ENSMUSG00000024292 Cyp4f14 1300014O15Rik|cyp4f-14 cytochrome P450, family 4, subfamily f, polypeptide 14 protein-coding common_peak2_46_158_0.890248132141662_7.75800702135519_9.44044697199143 chr16 91455053 91456186 + 9.44044697199143 NA Intergenic C-rich|Low_complexity|Low_complexity -9485 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak2_131_1364_-0.384140665773623_10.2226149029204_9.43919007722626 chr11 84878699 84880924 + 9.43919007722626 NA promoter-TSS (NM_025414) promoter-TSS (NM_025414) 384 NM_027388 70325 Mm.390414 NM_027388 ENSMUSG00000045140 Pigw 2610044A17Rik|Gwt1 phosphatidylinositol glycan anchor biosynthesis, class W protein-coding common_peak2_49_175_0.853195884685443_7.88602956098002_9.43876932948365 chr12 52503567 52504927 + 9.43876932948365 NA Intergenic CpG -11830 NM_009706 11855 Mm.35059 NM_009706 ENSMUSG00000035133 Arhgap5 p190-B|p190B Rho GTPase activating protein 5 protein-coding unique_peak2_10_137_-1.47533902527057_6.37085494414288_9.43847667973179 chrY 58854303 58855175 + 9.43847667973179 NA Intergenic MuLV-int|LTR|ERV1 778019 NR_038299 100041346 Mm.426191 NR_038299 ENSMUSG00000101005 Gm20871 - Sycp3 like Y-linked pseudogene pseudo common_peak1_237_1750_0.299721312992441_10.9238240249298_9.43847058201005 chr19 56547553 56549311 + 9.43847058201005 NA promoter-TSS (NM_018831) promoter-TSS (NM_018831) 171 NM_025811 66866 Mm.46346 NM_025811 ENSMUSG00000025078 Nhlrc2 1200003G01Rik|AI835049|AV002846|AW496455 NHL repeat containing 2 protein-coding common_peak2_199_2145_-0.301582235061069_10.916643243226_9.43793841717739 chr11 106215225 106218250 + 9.43793841717739 NA promoter-TSS (NM_026009) promoter-TSS (NM_026009) -189 NM_028074 72047 Mm.41367 NM_028074 ENSMUSG00000020705 Ddx42 1810047H21Rik|AW319508|AW556242|B430002H05Rik|RHELP|RNAHP|SF3b125 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 protein-coding common_peak1_61_248_0.733292583852582_8.32664822399437_9.43705618509186-2 chr4 152457081 152457874 + 9.43705618509186 NA intron (NM_010598, intron 1 of 15) intron (NM_010598, intron 1 of 15) -8622 NM_001252656 16498 Mm.388924 NM_010598 ENSMUSG00000028931 Kcnab2 F5|I2rf5|Kcnb3|kv-beta-2 potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein-coding common_peak1_61_248_0.733292583852582_8.32664822399437_9.43705618509186 chr18 53903211 53904026 + 9.43705618509186 NA intron (NM_152809, intron 3 of 12) MT2B|LTR|ERVL 41505 NM_152809 70425 Mm.368668 NM_152809 ENSMUSG00000073563 Csnk1g3 3300002K07Rik|C330049O21Rik casein kinase 1, gamma 3 protein-coding common_peak1_126_729_0.450458040406666_9.73698167397071_9.43661387695881 chr16 16302304 16303718 + 9.43661387695881 NA promoter-TSS (NM_198246) promoter-TSS (NM_198246) 46 NM_198246 70120 Mm.37486 NM_198246 ENSMUSG00000022792 Yars2 2210023C10Rik|tyrRS tyrosyl-tRNA synthetase 2 (mitochondrial) protein-coding common_peak1_66_280_0.696117379928797_8.48248501018533_9.43631683661453 chr17 6467760 6468817 + 9.43631683661453 NA Intergenic Intergenic -17294 NR_033520 547127 Mm.297552 NM_001045538 Tmem181b-ps Tmem181b transmembrane protein 181B, pseudogene pseudo common_peak1_100_1026_-0.447372272712737_9.78053432996183_9.43418987568018 chr17 29263544 29264577 + 9.43418987568018 NA promoter-TSS (NM_026845) promoter-TSS (NM_026845) -89 NM_026845 68816 Mm.328928 NM_026845 ENSMUSG00000024007 Ppil1 1110060O10Rik|AI327391|Cypl1 peptidylprolyl isomerase (cyclophilin)-like 1 protein-coding common_peak2_149_1565_-0.356106477815016_10.4348152583835_9.43391874867179 chr9 106428612 106431055 + 9.43391874867179 NA intron (NM_009082, intron 1 of 3) CpG 294 NM_009082 19944 Mm.288696 NM_009082 ENSMUSG00000048758 Rpl29 Rpl43 ribosomal protein L29 protein-coding common_peak1_31_330_-0.847821832495693_7.94677649055937_9.43148419683611 chr18 35561506 35562146 + 9.43148419683611 NA promoter-TSS (NM_010771) promoter-TSS (NM_010771) -332 NM_010771 17184 Mm.215034 NM_010771 ENSMUSG00000037236 Matr3 1110061A14Rik|2810017I02Rik|AI841759|AW555618|D030046F20Rik|mKIAA0723 matrin 3 protein-coding common_peak1_66_672_-0.563918994460593_9.11250319738002_9.43091869616515 chr12 102704024 102704972 + 9.43091869616515 NA intron (NM_172584, intron 1 of 9) CpG 371 NM_172584 217837 Mm.482192 NM_172584 ENSMUSG00000057963 Itpk1 BC031182 inositol 1,3,4-triphosphate 5/6 kinase protein-coding common_peak1_140_846_0.421047444247105_9.93674188145575_9.42987569103926 chr9 123112344 123113859 + 9.42987569103926 NA promoter-TSS (NM_001081188) promoter-TSS (NM_001081188) 104 NM_026917 69035 Mm.28300 NM_026917 ENSMUSG00000025786 Zdhhc3 1110020O22Rik|1810006O10Rik|2210017C02Rik|DHHC-3|GODZ|Gramp1|Zfp373 zinc finger, DHHC domain containing 3 protein-coding unique_peak2_9_127_-1.53547808355558_6.23226095822221_9.42981470394516 chr18 61398313 61399172 + 9.42981470394516 NA intron (NM_133249, intron 1 of 11) CpG 1689 NM_133249 170826 Mm.415302 NM_133249 ENSMUSG00000033871 Ppargc1b 4631412G21Rik|Perc peroxisome proliferative activated receptor, gamma, coactivator 1 beta protein-coding unique_peak2_13_164_-1.30636977541425_6.71313732653869_9.42599449973622 chr17 10232046 10233126 + 9.42599449973622 NA intron (NM_001159516, intron 4 of 6) intron (NM_001159516, intron 4 of 6) 86775 NM_021881 19317 Mm.130694 NM_021881 ENSMUSG00000062078 Qk 1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1 quaking protein-coding common_peak1_221_2408_-0.283688199687418_11.0923745783948_9.42524564009007 chr16 84583187 84585866 + 9.42524564009007 NA Intergenic Intergenic -95263 NR_040537 78023 Mm.243853 NR_040537 4930529L06Rik - RIKEN cDNA 4930529L06 gene ncRNA common_peak1_35_99_1.0874414832843_7.18757693141687_9.42396444186843 chr5 115069851 115070627 + 9.42396444186843 NA intron (NM_029012, intron 2 of 10) intron (NM_029012, intron 2 of 10) 37723 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt Gm13826|OTTMUSG00000014624 ribosomal protein L37, retrotransposed protein-coding common_peak2_35_99_1.0874414832843_7.18757693141687_9.42396444186843 chr19 37100429 37101389 + 9.42396444186843 NA intron (NM_001290829, intron 4 of 9) intron (NM_001290829, intron 4 of 9) -72934 NR_045329 319931 Mm.446730 NR_045329 ENSMUSG00000097591 A330032B11Rik - RIKEN cDNA A330032B11 gene ncRNA common_peak2_129_754_0.44319399730681_9.78192983286585_9.42385206939241 chr7 120634499 120636503 + 9.42385206939241 NA intron (NM_025899, intron 1 of 13) CpG 312 NM_025899 67003 Mm.334206 NM_025899 ENSMUSG00000030884 Uqcrc2 1500004O06Rik ubiquinol cytochrome c reductase core protein 2 protein-coding unique_peak2_35_367_-0.792264282997989_8.12742981455802_9.42215718433552 chr10 80900133 80901687 + 9.42215718433552 NA promoter-TSS (NM_013895) promoter-TSS (NM_013895) 59 NM_013895 30055 Mm.142132 NM_013895 ENSMUSG00000020219 Timm13 D10Ertd378e|Tim9|Timm9 translocase of inner mitochondrial membrane 13 protein-coding unique_peak2_11_145_-1.40266140197428_6.48849385789288_9.41933824191873-2 chr18 34886925 34888094 + 9.41933824191873 NA Intergenic Intergenic 26302 NM_007913 13653 Mm.181959 NM_007913 ENSMUSG00000038418 Egr1 A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr early growth response 1 protein-coding unique_peak2_11_145_-1.40266140197428_6.48849385789288_9.41933824191873-3 chr6 37731940 37733044 + 9.41933824191873 NA Intergenic Intergenic -138319 NM_001272064 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding unique_peak2_11_145_-1.40266140197428_6.48849385789288_9.41933824191873 chr14 106007173 106008246 + 9.41933824191873 NA Intergenic ORR1F|LTR|ERVL-MaLR -98489 NM_198601 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_70_713_-0.546620718182082_9.20646990493806_9.41878154420146 chr7 66183144 66184415 + 9.41878154420146 NA Intergenic ID2|SINE|ID 74264 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_196_1351_0.338227180343116_10.5699930264537_9.41681341231566 chr9 97109906 97111932 + 9.41681341231566 NA exon (NM_138756, exon 1 of 7) exon (NM_138756, exon 1 of 7) 122 NM_138756 192287 Mm.228067 NM_138756 ENSMUSG00000032449 Slc25a36 C330005L02Rik solute carrier family 25, member 36 protein-coding common_peak2_88_899_-0.480762822452849_9.57339977999061_9.41589708520756 chr12 102627244 102630890 + 9.41589708520756 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 55953 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_186_1257_0.350001467222736_10.4719169404907_9.4128432305295 chr3 144569435 144571314 + 9.4128432305295 NA promoter-TSS (NM_011828) promoter-TSS (NM_011828) -53 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding unique_peak2_39_406_-0.751138445449115_8.29331576154169_9.41275158138454 chr1 52365760 52367682 + 9.41275158138454 NA Intergenic Intergenic -133489 NM_001113383 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding common_peak1_115_1188_-0.413645062860375_10.0087104683155_9.41253632595328 chr11 85311269 85312255 + 9.41253632595328 NA exon (NM_016910, exon 1 of 6) exon (NM_016910, exon 1 of 6) 508 NM_016910 53892 Mm.45609 NM_016910 ENSMUSG00000020525 Ppm1d AV338790|Wip1 protein phosphatase 1D magnesium-dependent, delta isoform protein-coding common_peak1_95_973_-0.460777871617534_9.69738902627357_9.41046644052809 chr4 62408755 62409531 + 9.41046644052809 NA promoter-TSS (NM_139291) promoter-TSS (NM_139291) 360 NM_027297 70052 Mm.30660 NM_027297 ENSMUSG00000066148 Prpf4 1600015H11Rik|AI874830|AW047464|bN189G18.1 pre-mRNA processing factor 4 protein-coding common_peak1_281_3147_-0.24634191074183_11.4970488701366_9.4099999872115 chr11 98456865 98460069 + 9.4099999872115 NA Intergenic Intergenic 11633 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak1_27_292_-0.908192104404323_7.74066080222009_9.40914774819325 chr3 144720658 144721177 + 9.40914774819325 NA promoter-TSS (NM_019464) promoter-TSS (NM_019464) -582 NM_001282037 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_40_415_-0.738996453075667_8.33094149160326_9.40893997854077 chr15 36782148 36782894 + 9.40893997854077 NA intron (NM_001253805, intron 2 of 5) intron (NM_001253805, intron 2 of 5) 8411 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding unique_peak1_18_27_1.79300928133929_5.70385956272725_9.40814035399889 chr16 11577909 11578335 + 9.40814035399889 NA intron (NM_001290148, intron 8 of 13) intron (NM_001290148, intron 8 of 13) 172474 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding unique_peak1_18_27_1.79300928133929_5.70385956272725_9.40814035399889-2 chr4 63667575 63667964 + 9.40814035399889 NA Intergenic Intergenic -45340 NM_029324 75524 Mm.38543 NM_029324 ENSMUSG00000058935 1700018C11Rik bM230C2.3 RIKEN cDNA 1700018C11 gene protein-coding unique_peak1_18_27_1.79300928133929_5.70385956272725_9.40814035399889-3 chr8 83200717 83201200 + 9.40814035399889 NA intron (NM_001111304, intron 1 of 20) intron (NM_001111304, intron 1 of 20) 35606 NM_027758 71310 Mm.24031 NM_027758 ENSMUSG00000031709 Tbc1d9 4933431N12Rik|AI847101|AW490653|C76116 TBC1 domain family, member 9 protein-coding common_peak1_39_120_0.998883301542538_7.41830488804586_9.40645398599848 chr3 14891321 14892032 + 9.40645398599848 NA intron (NM_009801, intron 2 of 6) intron (NM_009801, intron 2 of 6) 5250 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding common_peak2_39_120_0.998883301542538_7.41830488804586_9.40645398599848 chr5 100798050 100799137 + 9.40645398599848 NA promoter-TSS (NM_026826) promoter-TSS (NM_026826) 7 NM_001081107 191578 Mm.21469 NM_180984 ENSMUSG00000035266 Helq AU021725|D430018E21Rik|Hel308 helicase, POLQ-like protein-coding common_peak1_144_881_0.412134055833368_9.9907018734742_9.40348930453271 chr13 8995464 8996841 + 9.40348930453271 NA promoter-TSS (NM_027000) promoter-TSS (NM_027000) -140 NM_027000 69237 Mm.41800 NM_027000 ENSMUSG00000021149 Gtpbp4 2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1 GTP binding protein 4 protein-coding common_peak1_314_2556_0.249478301588452_11.4449755960359_9.40246942151098 chr6 112695591 112697469 + 9.40246942151098 NA intron (NM_021385, intron 1 of 11) CpG 140 NM_021385 58186 Mm.103812 NM_021385 ENSMUSG00000030254 Rad18 2810024C04Rik|Rad18sc RAD18 E3 ubiquitin protein ligase protein-coding common_peak1_27_62_1.30928482651801_6.63192233675892_9.3977755367958-3 chr8 121850647 121851273 + 9.3977755367958 NA Intergenic Intergenic -21391 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding common_peak1_27_62_1.30928482651801_6.63192233675892_9.3977755367958 chr10 17684068 17684669 + 9.3977755367958 NA Intergenic Lx8|LINE|L1 -38860 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak1_27_62_1.30928482651801_6.63192233675892_9.3977755367958-2 chr10 60371256 60371730 + 9.3977755367958 NA 3' UTR (NM_028732, exon 7 of 7) 3' UTR (NM_028732, exon 7 of 7) 24642 NM_028732 74048 Mm.273584 NM_028732 ENSMUSG00000020101 Vsir 4632428N05Rik|Dies1|PD-1H|VISTA V-set immunoregulatory receptor protein-coding common_peak1_79_805_-0.510277178524479_9.39949743926573_9.39458728325612 chr9 92375119 92376312 + 9.39458728325612 NA Intergenic (GGGTG)n|Simple_repeat|Simple_repeat 66338 NM_001033184 78459 Mm.179195 NM_001033184 ENSMUSG00000074139 1700057G04Rik - RIKEN cDNA 1700057G04 gene protein-coding unique_peak2_25_274_-0.94786656377109_7.62935452652648_9.39051083377734 chr3 108256206 108257084 + 9.39051083377734 NA promoter-TSS (NM_011967) promoter-TSS (NM_011967) -281 NM_011967 26442 Mm.208883 NM_011967 ENSMUSG00000068749 Psma5 ZETA proteasome (prosome, macropain) subunit, alpha type 5 protein-coding common_peak2_92_941_-0.468766528725194_9.64519998525019_9.39022332282394 chr5 137778148 137779967 + 9.39022332282394 NA exon (NM_027242, exon 1 of 4) exon (NM_027242, exon 1 of 4) 139 NM_027242 69871 Mm.276058 NM_027242 ENSMUSG00000029725 Ppp1r35 2010007H12Rik|2010011D20Rik|AL024004 protein phosphatase 1, regulatory subunit 35 protein-coding common_peak2_179_1909_-0.319953662985768_10.7393800914302_9.38933888662852 chr13 55098842 55100939 + 9.38933888662852 NA intron (NR_121592, intron 1 of 13) CpG 405 NM_011307 20184 Mm.259301 NM_011307 ENSMUSG00000025878 Uimc1 9430016E08Rik|D330018D10Rik|D630032M02Rik|RIP110|Rxrip110 ubiquitin interaction motif containing 1 protein-coding common_peak1_17_200_-1.14636632930626_7.0778685265258_9.38666477299908 chr14 100210495 100210971 + 9.38666477299908 NA Intergenic ID_B1|SINE|B4 -60937 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding common_peak1_433_3910_0.203508804453186_12.0350762229595_9.38494366163271 chr7 66246672 66251293 + 9.38494366163271 NA Intergenic Intergenic 132742 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_42_434_-0.71914442048214_8.40529938049502_9.38286128022141 chr19 45748863 45749563 + 9.38286128022141 NA intron (NM_008723, intron 1 of 5) CpG-7591 350 NM_008723 18150 Mm.1406 NM_008723 ENSMUSG00000056209 Npm3 Nub1 nucleoplasmin 3 protein-coding common_peak2_75_763_-0.523840002266144_9.31550882690268_9.38230396419923 chr14 36952251 36954337 + 9.38230396419923 NA intron (NM_027045, intron 1 of 10) Lx9|LINE|L1 15470 NM_027045 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding common_peak1_41_425_-0.730622665240983_8.36939828760535_9.38065149030533 chr2 35412415 35413313 + 9.38065149030533 NA intron (NM_001308299, intron 6 of 7) intron (NM_001308299, intron 6 of 7) -15690 NM_001272040 74854 Mm.159338 NM_001080709 ENSMUSG00000079421 4930402F06Rik - RIKEN cDNA 4930402F06 gene protein-coding unique_peak2_3_71_-2.32689636068986_5.00647682109738_9.37310619993717 chrX 7679457 7680012 + 9.37310619993717 NA intron (NM_018832, intron 2 of 5) intron (NM_018832, intron 2 of 5) 1355 NM_018832 54634 Mm.67912 NM_018832 ENSMUSG00000031147 Magix Pdzx|Sfc18 MAGI family member, X-linked protein-coding common_peak2_36_377_-0.782458773009662_8.17101303771624_9.37294053129683 chr11 70621567 70623267 + 9.37294053129683 NA Intergenic Intergenic -3223 NM_009603 11448 Mm.4980 NM_009603 ENSMUSG00000014609 Chrne AChrepsilon|Acre|nAChRE cholinergic receptor, nicotinic, epsilon polypeptide protein-coding common_peak1_32_85_1.15105519295878_7.00179235118149_9.37238397895364 chr2 79002496 79003090 + 9.37238397895364 NA Intergenic Intergenic 133746 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_16_191_-1.18142623974698_6.99424938084766_9.37238397895362 chr9 46173461 46173921 + 9.37238397895362 NA intron (NM_027498, intron 4 of 24) intron (NM_027498, intron 4 of 24) -54939 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding common_peak1_15_182_-1.21944657515887_6.90597655070461_9.37221927390011 chr3 95134232 95134667 + 9.37221927390011 NA promoter-TSS (NM_001163573) promoter-TSS (NM_001163573) 361 NM_153121 217779 Mm.341945 NM_153121 ENSMUSG00000053769 Lysmd1 2610022K04Rik|AI415311 LysM, putative peptidoglycan-binding, domain containing 1 protein-coding common_peak1_15_182_-1.21944657515887_6.90597655070461_9.37221927390011-2 chr5 115237480 115237870 + 9.37221927390011 NA intron (NM_026398, intron 1 of 5) ID_B1|SINE|B4 1824 NM_026398 117109 Mm.24636 NM_026398 ENSMUSG00000060152 Pop5 1500019J17Rik|2700077E03Rik|AW049989|Rnasep3 processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae) protein-coding common_peak2_256_1944_0.284047209283122_11.0675780445151_9.36898347621767 chr12 102742911 102745964 + 9.36898347621767 NA promoter-TSS (NM_022323) promoter-TSS (NM_022323) 677 NM_177140 320351 Mm.86546 NM_177140 ENSMUSG00000046675 Tmem251 D230037D09Rik transmembrane protein 251 protein-coding common_peak1_62_631_-0.58217158822532_9.01269495406444_9.36892056039388 chr3 36863077 36863850 + 9.36892056039388 NA intron (NM_172679, intron 1 of 85) CpG 357 NM_172679 229227 Mm.207907 NM_172679 ENSMUSG00000037270 4932438A13Rik 4732443H21|B830039D19Rik|D630029K19Rik|FSA|Kiaa1109|Tweek RIKEN cDNA 4932438A13 gene protein-coding common_peak2_62_631_-0.58217158822532_9.01269495406444_9.36892056039388 chr3 32735967 32737805 + 9.36892056039388 NA promoter-TSS (NM_029017) promoter-TSS (NM_029017) -131 NM_029017 74600 Mm.288960 NM_029017 ENSMUSG00000037531 Mrpl47 4833424P18Rik|CGI-204|ENSMUSG00000051761|Gm9859|L47mt|MRP-L47|MTF/L47|NCM1 mitochondrial ribosomal protein L47 protein-coding common_peak2_56_217_0.776314394773247_8.15634152216355_9.36519707831947 chr7 128042018 128043266 + 9.36519707831947 NA Intergenic Intergenic -19998 NM_001082960 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak1_21_236_-1.02894550620431_7.37427049579611_9.36493037635096 chr4 149759960 149760465 + 9.36493037635096 NA intron (NM_027460, intron 2 of 6) intron (NM_027460, intron 2 of 6) 14055 NM_027460 70556 Mm.41877 NM_027460 ENSMUSG00000028982 Slc25a33 5730438N18Rik|Pnc1 solute carrier family 25, member 33 protein-coding unique_peak2_21_236_-1.02894550620431_7.37427049579611_9.36493037635096 chr9 14293208 14294603 + 9.36493037635096 NA intron (NM_030261, intron 1 of 9) Charlie1a|DNA|hAT-Charlie 17604 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_283_2225_0.266146290877767_11.2533110227808_9.36409198560887 chr2 163601224 163603988 + 9.36409198560887 NA intron (NR_131225, intron 1 of 3) intron (NR_131225, intron 1 of 3) 292 NR_131225 76080 Mm.89828 NM_029512 ENSMUSG00000017679 Ttpal 3110080A02Rik|5830472M02Rik tocopherol (alpha) transfer protein-like protein-coding common_peak1_358_3043_0.229340455743969_11.6864228713755_9.36384583718366 chr1 54924214 54926709 + 9.36384583718366 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 926 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_126_730_0.448483098221608_9.73796914506324_9.36325108486598 chr15 79440993 79442512 + 9.36325108486598 NA promoter-TSS (NM_001289899) promoter-TSS (NM_001289899) 66 NM_001289899 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak2_75_341_0.635736310883706_8.73572067032775_9.36324528415853 chr14 118136381 118137845 + 9.36324528415853 NA promoter-TSS (NM_021434) promoter-TSS (NM_021434) -14 NM_021434 58245 Mm.275411 NM_021434 ENSMUSG00000022131 Gpr180 AB041545|E130016I23Rik|Itr G protein-coupled receptor 180 protein-coding common_peak2_52_531_-0.639540670058077_8.73551210047215_9.36324528415853 chr6 37713272 37715011 + 9.36324528415853 NA Intergenic Intergenic -156670 NM_001272064 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak2_91_930_-0.470951931092571_9.62716139201251_9.36303287604581 chr13 96523043 96525483 + 9.36303287604581 NA intron (NM_012048, intron 1 of 14) Lx7|LINE|L1 18222 NM_012048 27015 Mm.89926 NM_012048 ENSMUSG00000021668 Polk DINP|Dinb1 polymerase (DNA directed), kappa protein-coding common_peak2_196_1352_0.337160492648763_10.5705263703009_9.36286706620411 chr2 180588794 180590708 + 9.36286706620411 NA intron (NM_031373, intron 1 of 6) CpG 344 NM_031373 72075 Mm.250418 NM_031373 ENSMUSG00000049401 Ogfr 2010013E17Rik opioid growth factor receptor protein-coding common_peak1_135_1407_-0.376058424104055_10.2714024065853_9.36112954729361 chr3 84825803 84827806 + 9.36112954729361 NA intron (NM_001177773, intron 1 of 13) L2a|LINE|L2 11227 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak1_26_282_-0.922450675992287_7.68343290483574_9.36025722705334-2 chr7 4613701 4614318 + 9.36025722705334 NA Intergenic Intergenic -9968 NM_207270 545902 Mm.188925 NM_207270 ENSMUSG00000035429 Ptprh R-PTP-H|sap-1 protein tyrosine phosphatase, receptor type, H protein-coding common_peak1_26_282_-0.922450675992287_7.68343290483574_9.36025722705334 chr15 99336137 99336809 + 9.36025722705334 NA intron (NM_001310623, intron 2 of 24) intron (NM_001310623, intron 2 of 24) 34009 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_37_386_-0.769213241561164_8.21158313536383_9.3597156440324 chr12 88360346 88360953 + 9.3597156440324 NA promoter-TSS (NM_028105) promoter-TSS (NM_028105) -133 NM_028105 72113 Mm.181387 NM_028105 ENSMUSG00000021044 Adck1 2610005A10Rik aarF domain containing kinase 1 protein-coding common_peak1_25_54_1.37406153111627_6.4683904790828_9.35640897557854 chr11 121102618 121103067 + 9.35640897557854 NA Intergenic Lx8|LINE|L1 15835 NM_027622 70956 Mm.158506 NM_027622 ENSMUSG00000039337 Tex19.2 4921530G04Rik|Tex19b testis expressed gene 19.2 protein-coding unique_peak1_25_54_1.37406153111627_6.4683904790828_9.35640897557854 chr7 4943410 4943947 + 9.35640897557854 NA exon (NM_173008, exon 14 of 14) exon (NM_173008, exon 14 of 14) 17834 NM_173008 269855 Mm.44190 NM_173008 ENSMUSG00000035279 Ssc5d A430110N23Rik|S5D-SRCRB scavenger receptor cysteine rich family, 5 domains protein-coding common_peak1_47_482_-0.675491599557322_8.57813357905711_9.35552265581034 chr11 101173022 101174000 + 9.35552265581034 NA 3' UTR (NM_007721, exon 2 of 2) 3' UTR (NM_007721, exon 2 of 2) 1932 NM_007721 12777 Mm.8021 NM_007721 ENSMUSG00000044052 Ccr10 Cmkbr9|Gpr2 chemokine (C-C motif) receptor 10 protein-coding common_peak1_66_671_-0.561773722629036_9.11143056146424_9.35457390542795 chr15 10035693 10036965 + 9.35457390542795 NA Intergenic Intergenic -140909 NM_011169 19116 Mm.10516 NM_011169 ENSMUSG00000005268 Prlr AI987712|Pr-1|Pr-3|Prlr-rs1 prolactin receptor protein-coding common_peak2_78_362_0.618273353117566_8.81296241455453_9.35448729179962 chr4 98382457 98383711 + 9.35448729179962 NA exon (NM_053157, exon 1 of 7) exon (NM_053157, exon 1 of 7) 181 NM_053157 94043 Mm.331719 NM_053157 ENSMUSG00000028563 Tm2d1 2310026L18Rik|AA990549|Bbp TM2 domain containing 1 protein-coding common_peak2_98_508_0.529932617738469_9.25648815494493_9.35366177154207 chr11 53772349 53775480 + 9.35366177154207 NA intron (NM_001159396, intron 4 of 9) intron (NM_001159396, intron 4 of 9) 3441 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_199_2143_-0.300237064762319_10.9159706580766_9.3522109319814 chr13 81782522 81784565 + 9.3522109319814 NA intron (NM_007684, intron 1 of 4) CpG 251 NM_007684 12626 Mm.12481 NM_007684 ENSMUSG00000021537 Cetn3 MmCEN3 centrin 3 protein-coding common_peak1_88_898_-0.47915893675026_9.57259783713932_9.34985565673635 chr16 92799385 92800385 + 9.34985565673635 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 26189 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_41_131_0.959692835626401_7.52424053717165_9.34931120978402 chr4 139230811 139231515 + 9.34931120978402 NA intron (NM_001271405, intron 1 of 8) B1_Mur4|SINE|Alu 37052 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_104_554_0.50923626943935_9.37096209595714_9.34653879032141 chr10 40300772 40302221 + 9.34653879032141 NA intron (NM_009665, intron 1 of 7) CpG 690 NM_007444 100041585 Mm.476925 NM_007444 ENSMUSG00000063953 Amd2 AdoMetDC|Amd1|Amd3|ENSMUSG00000063953 S-adenosylmethionine decarboxylase 2 protein-coding common_peak1_189_2025_-0.30933635733957_10.8297502801314_9.34225506139376 chrX 74243435 74246451 + 9.34225506139376 NA intron (NM_001290421, intron 1 of 46) intron (NM_001290421, intron 1 of 46) 1591 NM_010227 192176 Mm.295533 NM_010227 ENSMUSG00000031328 Flna ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1 filamin, alpha protein-coding common_peak2_127_738_0.446659642538085_9.75276037541519_9.34161669208754 chr10 39513287 39516076 + 9.34161669208754 NA intron (NM_008054, intron 4 of 13) MLT1F1|LTR|ERVL-MaLR -98253 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak2_46_473_-0.685612161472241_8.54593716816214_9.34146396394295 chr4 129461551 129462505 + 9.34146396394295 NA intron (NM_133889, intron 2 of 10) intron (NM_133889, intron 2 of 10) 349 NM_133889 100383 Mm.17918 NM_133889 ENSMUSG00000040859 Bsdc1 1110063F24Rik|AW011758 BSD domain containing 1 protein-coding unique_peak1_14_15_2.18204412141135_5.09102206070567_9.34113213950796 chr9 110690050 110690447 + 9.34113213950796 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 33745 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_50_512_-0.655144238479597_8.67524289636725_9.34083639168208 chr2 144167676 144168502 + 9.34083639168208 NA Intergenic Intergenic 21201 NM_001033778 common_peak1_193_1324_0.340174030211841_10.5418636594438_9.3384329809689 chr15 89354943 89356934 + 9.3384329809689 NA promoter-TSS (NM_178919) promoter-TSS (NM_178919) 219 NM_001271601 52683 Mm.143167 NM_001115132 ENSMUSG00000008690 Ncaph2 - non-SMC condensin II complex, subunit H2 protein-coding common_peak2_141_856_0.416620462920873_9.95146162557294_9.33794453812142 chr2 32961196 32964508 + 9.33794453812142 NA promoter-TSS (NR_002898) promoter-TSS (NR_002898) -449 NR_002898 104367 Mm.250030 NR_002898 ENSMUSG00000065124 Snora65 MBII-351|Rnu65 small nucleolar RNA, H/ACA box 65 snoRNA unique_peak2_5_91_-1.96301111033763_5.5420564008882_9.33706435865453 chr1 92773499 92774147 + 9.33706435865453 NA Intergenic Lx4B|LINE|L1 -57863 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_53_199_0.804963688251227_8.04633803390034_9.33155778437662 chr4 139230308 139231549 + 9.33155778437662 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 36817 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_53_199_0.804963688251227_8.04633803390034_9.33155778437662 chr12 52005801 52006736 + 9.33155778437662 NA intron (NM_029545, intron 1 of 2) intron (NM_029545, intron 1 of 2) 233 NM_029545 328092 Mm.2821 NM_029545 ENSMUSG00000020956 Dtd2 4930578F06Rik|6530401N04Rik|B830049N13Rik D-tyrosyl-tRNA deacylase 2 protein-coding common_peak1_53_199_0.804963688251227_8.04633803390034_9.33155778437662-2 chr4 147936229 147936963 + 9.33155778437662 NA intron (NM_011122, intron 1 of 18) CpG 180 NM_011122 18822 Mm.23951 NM_011122 ENSMUSG00000019055 Plod1 2410042F05Rik|AI854890|AV007929|Lh1|Plod procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 protein-coding common_peak1_36_105_1.05186319664821_7.2538520528873_9.33155245155261-2 chr8 107449699 107450324 + 9.33155245155261 NA intron (NM_025830, intron 1 of 23) intron (NM_025830, intron 1 of 23) 13613 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak1_36_105_1.05186319664821_7.2538520528873_9.33155245155261 chr18 39083354 39084165 + 9.33155245155261 NA intron (NM_175164, intron 1 of 22) MER45R|DNA|hAT-Tip100 90614 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak2_158_1004_0.386896495530106_10.1664280338313_9.33058299630728 chr13 51100364 51102170 + 9.33058299630728 NA promoter-TSS (NM_001283029) promoter-TSS (NM_001283029) -280 NM_001283029 20729 Mm.188432 NM_011462 ENSMUSG00000021395 Spin1 Spin spindlin 1 protein-coding common_peak1_148_916_0.404147078512567_10.0428514628513_9.32731289299543 chr5 77265310 77267133 + 9.32731289299543 NA intron (NM_011263, intron 1 of 3) CpG 727 NM_011263 19712 Mm.28840 NM_011263 ENSMUSG00000029249 Rest 2610008J04Rik|AA407358|NRSF|REST4 RE1-silencing transcription factor protein-coding common_peak2_76_773_-0.519468215371344_9.33645564845874_9.32720805025357 chr13 67637061 67638215 + 9.32720805025357 NA intron (NM_183146, intron 1 of 3) intron (NM_183146, intron 1 of 3) 115 NM_183146 212281 Mm.342918 NM_183146 ENSMUSG00000021510 Zfp729a A530054K11Rik|Rslcan3 zinc finger protein 729a protein-coding common_peak1_92_940_-0.467234191840946_9.64443381680806_9.3257514938579 chr15 36609124 36610034 + 9.3257514938579 NA promoter-TSS (NM_008774) promoter-TSS (NM_008774) -606 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak1_168_1780_-0.330657952572208_10.6331428248155_9.32282802480473 chr9 62810755 62812745 + 9.32282802480473 NA promoter-TSS (NM_010193) promoter-TSS (NM_010193) -102 NM_010193 14155 Mm.24069 NM_010193 ENSMUSG00000032244 Fem1b mKIAA0396 feminization 1 homolog b (C. elegans) protein-coding common_peak2_59_601_-0.598350932975642_8.93444421027188_9.32109328519858 chr14 7773316 7774887 + 9.32109328519858 NA Intergenic (CAG)n|Simple_repeat|Simple_repeat -43856 NM_001081427 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak2_59_601_-0.598350932975642_8.93444421027188_9.32109328519858-2 chr8 4252537 4254105 + 9.32109328519858 NA intron (NM_133968, intron 1 of 4) CpG 219 NM_133968 102209 Mm.28452 NM_133968 ENSMUSG00000011837 Snapc2 0610007H10Rik|AU015675 small nuclear RNA activating complex, polypeptide 2 protein-coding unique_peak1_22_42_1.51219604939141_6.1823627793978_9.32092738868413-2 chr17 45619039 45619544 + 9.32092738868413 NA Intergenic Intergenic -17189 NM_001177469 653016 Mm.45676 NM_001177468 ENSMUSG00000079471 Gm7325 EG653016|Esgp predicted gene 7325 protein-coding unique_peak1_22_42_1.51219604939141_6.1823627793978_9.32092738868413 chr11 95737976 95738507 + 9.32092738868413 NA Intergenic B1_Mur1|SINE|Alu -10826 NM_201609 268469 Mm.389038 NM_201609 ENSMUSG00000075595 Zfp652 9530033F24Rik|ZNF652 zinc finger protein 652 protein-coding common_peak2_111_609_0.487123939940389_9.49622740242044_9.31976663218689 chr12 24973500 24975879 + 9.31976663218689 NA promoter-TSS (NM_001081378) promoter-TSS (NM_001081378) -243 NM_001081378 77480 Mm.250641 NM_001081378 ENSMUSG00000036333 Kidins220 3110039L19Rik|AI194387|AI316525|C330002I19Rik|mKIAA1250 kinase D-interacting substrate 220 protein-coding common_peak1_109_593_0.493584208771505_9.46111122518652_9.31771996122199 chr10 96337606 96338731 + 9.31771996122199 NA Intergenic Intergenic 111961 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA unique_peak2_19_217_-1.07705009714615_7.22965927620385_9.31663193553177 chrX 73007289 73008310 + 9.31663193553177 NA intron (NM_001109043, intron 12 of 18) MER20|DNA|hAT-Charlie 15720 NR_035517 100316779 NR_035517 ENSMUSG00000089357 Mir2137 mmu-mir-2137 microRNA 2137 ncRNA common_peak1_95_486_0.539222128382466_9.19738902627357_9.3164519330282 chr12 24974672 24976006 + 9.3164519330282 NA intron (NM_001081378, intron 1 of 31) intron (NM_001081378, intron 1 of 31) 407 NM_001081378 77480 Mm.250641 NM_001081378 ENSMUSG00000036333 Kidins220 3110039L19Rik|AI194387|AI316525|C330002I19Rik|mKIAA1250 kinase D-interacting substrate 220 protein-coding common_peak2_145_891_0.408031437651681_10.0049156187461_9.31516124654068 chr15 101265578 101268626 + 9.31516124654068 NA intron (NM_010444, intron 1 of 6) intron (NM_010444, intron 1 of 6) 256 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding common_peak2_57_580_-0.607118727705604_8.87883498955173_9.3143322781927 chr7 7120489 7121758 + 9.3143322781927 NA intron (NM_172738, intron 1 of 4) intron (NM_172738, intron 1 of 4) 353 NM_172738 232853 Mm.23838 NM_172738 ENSMUSG00000062116 Zfp954 5730403M16Rik|8030437F07|AA123315 zinc finger protein 954 protein-coding common_peak1_33_90_1.12235393196183_7.06897160617961_9.31416579355446 chr4 40876730 40877471 + 9.31416579355446 NA Intergenic Intergenic -22563 NM_022305 14595 Mm.15622 NM_022305 ENSMUSG00000028413 B4galt1 B-1,4-GalT|B-1,4-GalT1|GalT|Ggtb|Ggtb2|b4Gal-T1|beta-1,4-GalT|beta-1,4-GalT1|beta4Gal-T1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 protein-coding common_peak1_351_2966_0.231457775959109_11.6505180994598_9.31070579134972 chr11 11692268 11697796 + 9.31070579134972 NA intron (NM_001301866, intron 1 of 5) intron (NM_001301866, intron 1 of 5) 4855 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_128_747_0.442967226519595_9.76837807314744_9.31034450166818 chr5 36667939 36671203 + 9.31034450166818 NA intron (NM_001081232, intron 2 of 8) intron (NM_001081232, intron 2 of 8) 26450 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak1_128_747_0.442967226519595_9.76837807314744_9.31034450166818 chr7 104445379 104446718 + 9.31034450166818 NA intron (NM_009099, intron 1 of 7) intron (NM_009099, intron 1 of 7) 19145 NM_009099 20128 Mm.295578 NM_009099 ENSMUSG00000030921 Trim30a Rpt-1|Rpt1|Trim30 tripartite motif-containing 30A protein-coding common_peak2_89_908_-0.47534553544312_9.59046371647255_9.30991294053733 chr9 44343119 44344708 + 9.30991294053733 NA intron (NM_013551, intron 1 of 13) CpG 315 NM_013551 15288 Mm.247676 NM_013551 ENSMUSG00000032126 Hmbs PBGD|T25658|Ups|Uros1 hydroxymethylbilane synthase protein-coding common_peak2_167_1085_0.372503189553205_10.271059982581_9.30842071286776 chr13 120298794 120302771 + 9.30842071286776 NA intron (NM_001037925, intron 1 of 4) intron (NM_001037925, intron 1 of 4) 390 NM_001037925 625360 Mm.327506 NM_001037925 ENSMUSG00000094796 BC147527 - cDNA sequence BC147527 protein-coding common_peak1_37_110_1.03256064823314_7.31069619046668_9.30792689102824 chr5 105623609 105624520 + 9.30792689102824 NA Intergenic Intergenic -75905 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak2_20_227_-1.05541537036624_7.30518232898162_9.30792689102824 chr2 128503001 128503681 + 9.30792689102824 NA Intergenic Intergenic -73990 NR_028590 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_58_591_-0.603926960587124_8.90748988533539_9.3075574434562 chr3 75498080 75500094 + 9.3075574434562 NA Intergenic Intergenic 57765 NM_019745 56426 Mm.316473 NM_019745 ENSMUSG00000027835 Pdcd10 2410003B13Rik|Ccm3|Tfa15|Tfar15 programmed cell death 10 protein-coding common_peak1_84_856_-0.491509546260009_9.4973966209825_9.30734509198227 chr14 106163399 106164555 + 9.30734509198227 NA Intergenic Intergenic 57779 NR_073203 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_30_76_1.19989566403941_6.8667343727146_9.30522820054919-2 chr6 129786429 129787032 + 9.30522820054919 NA Intergenic MTEb|LTR|ERVL-MaLR -10881 NM_001014997 232415 Mm.290598 NM_001014997 ENSMUSG00000071158 Gm156 Klrh1 predicted gene 156 protein-coding common_peak1_30_76_1.19989566403941_6.8667343727146_9.30522820054919 chr18 23842150 23842757 + 9.30522820054919 NA intron (NM_001162942, intron 3 of 7) intron (NM_001162942, intron 3 of 7) 38483 NM_153058 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak1_45_153_0.898286574584964_7.71592982798738_9.30494371164171 chr17 84228848 84229940 + 9.30494371164171 NA intron (NM_183021, intron 33 of 37) ID_B1|SINE|B4 -41447 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_248_1864_0.288680470179031_11.0093001502321_9.30160649920672 chr11 11511072 11514465 + 9.30160649920672 NA intron (NM_028669, intron 5 of 5) intron (NM_028669, intron 5 of 5) 23502 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak2_103_547_0.510613784053117_9.35333897498709_9.30134555749531 chr18 70621596 70623720 + 9.30134555749531 NA exon (NM_010773, exon 6 of 7) exon (NM_010773, exon 6 of 7) 54366 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak1_91_929_-0.469401479529171_9.62638616623081_9.29828044316263-2 chr17 56276045 56277623 + 9.29828044316263 NA promoter-TSS (NM_174989) promoter-TSS (NM_174989) -67 NM_174989 106759 Mm.203952 NM_174989 ENSMUSG00000047123 Ticam1 AW046014|AW547018|TICAM-1|TRIF toll-like receptor adaptor molecule 1 protein-coding common_peak1_91_929_-0.469401479529171_9.62638616623081_9.29828044316263 chr15 86172678 86173873 + 9.29828044316263 NA intron (NM_145475, intron 1 of 12) intron (NM_145475, intron 1 of 12) 12866 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding common_peak1_115_1186_-0.411216282756625_10.0074960782636_9.2977016359261 chr7 19309224 19310367 + 9.2977016359261 NA 5' UTR (NM_008036, exon 1 of 4) 5' UTR (NM_008036, exon 1 of 4) 250 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding unique_peak1_16_21_1.94410464233687_5.43148393980573_9.29500169310755-8 chr9 66263121 66263535 + 9.29500169310755 NA intron (NM_010019, intron 9 of 11) intron (NM_010019, intron 9 of 11) -87122 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding unique_peak1_16_21_1.94410464233687_5.43148393980573_9.29500169310755-4 chr13 101533167 101533610 + 9.29500169310755 NA Intergenic Intergenic -135808 NR_046187 78136 Mm.399065 NR_046187 4922502H24Rik - RIKEN cDNA 4922502H24 gene ncRNA unique_peak1_16_21_1.94410464233687_5.43148393980573_9.29500169310755-7 chr9 32942579 32942920 + 9.29500169310755 NA Intergenic RMER1A|Other|Other -13783 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA unique_peak1_16_21_1.94410464233687_5.43148393980573_9.29500169310755-10 chrX 159755674 159756121 + 9.29500169310755 NA intron (NM_021389, intron 1 of 16) intron (NM_021389, intron 1 of 16) 47296 NR_110970 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding unique_peak1_16_21_1.94410464233687_5.43148393980573_9.29500169310755-3 chr13 43295801 43296220 + 9.29500169310755 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) 8162 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding unique_peak1_16_21_1.94410464233687_5.43148393980573_9.29500169310755-6 chr7 49099022 49099418 + 9.29500169310755 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 140147 NM_001111016 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak1_16_21_1.94410464233687_5.43148393980573_9.29500169310755-9 chrX 50596123 50596543 + 9.29500169310755 NA intron (NR_015505, intron 10 of 19) intron (NR_015505, intron 10 of 19) 38988 NR_015505 103012 Mm.482523 NR_015505 ENSMUSG00000085396 Firre 5830467J12Rik|6720401G13Rik|AW048145 functional intergenic repeating RNA element ncRNA unique_peak1_16_21_1.94410464233687_5.43148393980573_9.29500169310755 chr10 116568868 116569260 + 9.29500169310755 NA intron (NR_024327, intron 1 of 13) ID4_|SINE|ID 12447 NM_001037848 72068 Mm.351553 NM_028082 ENSMUSG00000020166 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650 CCR4-NOT transcription complex, subunit 2 protein-coding common_peak1_16_21_1.94410464233687_5.43148393980573_9.29500169310755 chr1 159233520 159234018 + 9.29500169310755 NA intron (NM_011931, intron 1 of 19) intron (NM_011931, intron 1 of 19) 1443 NM_011931 26374 Mm.328135 NM_011931 ENSMUSG00000040782 Rfwd2 AI316802|C80879|Cop1 ring finger and WD repeat domain 2 protein-coding unique_peak1_16_21_1.94410464233687_5.43148393980573_9.29500169310755-2 chr12 79444953 79445394 + 9.29500169310755 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 147822 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak1_16_21_1.94410464233687_5.43148393980573_9.29500169310755-5 chr18 35841530 35841974 + 9.29500169310755 NA intron (NM_133687, intron 1 of 2) intron (NM_133687, intron 1 of 2) 11934 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_55_560_-0.618679899404512_8.82251701090654_9.29486385132688 chr8 40594718 40595794 + 9.29486385132688 NA intron (NM_001040699, intron 4 of 13) intron (NM_001040699, intron 4 of 13) 39536 NM_001040699 54384 Mm.294871 NM_019433 ENSMUSG00000039431 Mtmr7 - myotubularin related protein 7 protein-coding common_peak1_27_291_-0.903259808862092_7.73819465444897_9.29427235568304 chr1 87755382 87755881 + 9.29427235568304 NA promoter-TSS (NM_001205392) promoter-TSS (NM_001205392) -380 NM_029846 77040 Mm.272972 NM_029846 ENSMUSG00000026289 Atg16l1 1500009K01Rik|Apg16l|Atg16l|WDR30 autophagy related 16-like 1 (S. cerevisiae) protein-coding unique_peak1_15_18_2.04832574968158_5.27209038828438_9.29152665504879-2 chr7 63913185 63913508 + 9.29152665504879 NA intron (NM_021366, intron 1 of 1) RMER17C|LTR|ERVK -3511 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak1_15_18_2.04832574968158_5.27209038828438_9.29152665504879 chr10 61238792 61239181 + 9.29152665504879 NA intron (NM_001081127, intron 4 of 21) Lx8|LINE|L1 34452 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak1_38_115_1.01496245448029_7.36546222236772_9.29118674827848 chr10 39448834 39449704 + 9.29118674827848 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 79470 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak1_21_38_1.5743955238317_6.0725999807781_9.29036174086306 chr9 98333345 98333792 + 9.29036174086306 NA intron (NM_144533, intron 1 of 4) MTD|LTR|ERVL-MaLR 36985 NM_144533 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak1_21_38_1.5743955238317_6.0725999807781_9.29036174086306-2 chr5 140578290 140578769 + 9.29036174086306 NA Intergenic Intergenic -13462 NM_030022 77998 Mm.160040 NM_030022 ENSMUSG00000036586 Grifin E130101O17Rik galectin-related inter-fiber protein protein-coding common_peak1_21_38_1.5743955238317_6.0725999807781_9.29036174086306 chr4 43969936 43970384 + 9.29036174086306 NA intron (NM_027450, intron 3 of 4) intron (NM_027450, intron 3 of 4) 12458 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak2_182_1222_0.352445278672869_10.4324313278638_9.29019999910239 chr6 72346365 72348505 + 9.29019999910239 NA exon (NM_026696, exon 1 of 4) exon (NM_026696, exon 1 of 4) 118 NM_026696 68364 Mm.52711 NM_026696 ENSMUSG00000058706 0610030E20Rik 1500031N04Rik|2810411C16Rik|AI461894 RIKEN cDNA 0610030E20 gene protein-coding common_peak2_153_961_0.393440768189381_10.1066134678647_9.28896328548696 chr8 111144709 111146476 + 9.28896328548696 NA promoter-TSS (NR_040364) promoter-TSS (NR_040364) -94 NR_040364 434350 Mm.442061 NR_040363 9430091E24Rik - RIKEN cDNA 9430091E24 gene ncRNA common_peak1_620_6249_0.16122387811655_12.6902524134951_9.28817566822016 chr2 127332151 127335995 + 9.28817566822016 NA Intergenic Intergenic -2086 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak1_50_182_0.831970938843414_7.93168530770575_9.28743218816707 chr8 69270840 69271536 + 9.28743218816707 NA 5' UTR (NM_172491, exon 1 of 6) 5' UTR (NM_172491, exon 1 of 6) 108 NM_172491 211135 Mm.294970 NM_172491 ENSMUSG00000079038 D130040H23Rik - RIKEN cDNA D130040H23 gene protein-coding common_peak1_67_681_-0.55686704567729_9.13519440618553_9.28561897708016 chr4 40854208 40854927 + 9.28561897708016 NA promoter-TSS (NM_022305) promoter-TSS (NM_022305) -30 NM_022305 14595 Mm.15622 NM_022305 ENSMUSG00000028413 B4galt1 B-1,4-GalT|B-1,4-GalT1|GalT|Ggtb|Ggtb2|b4Gal-T1|beta-1,4-GalT|beta-1,4-GalT1|beta4Gal-T1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 protein-coding common_peak1_41_424_-0.72723207604021_8.36770299300496_9.28520972168972 chr9 113916792 113917574 + 9.28520972168972 NA intron (NM_001286600, intron 34 of 34) intron (NM_001286600, intron 34 of 34) -13751 NM_001083319 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding unique_peak2_7_109_-1.71171876158585_5.92550033273174_9.28503747307413 chr5 123009773 123010506 + 9.28503747307413 NA Intergenic MIRb|SINE|MIR -4935 NM_175423 109305 Mm.218582 NM_175423 ENSMUSG00000049686 Orai1 D730049H07Rik|Tmem142a|orai-1 ORAI calcium release-activated calcium modulator 1 protein-coding common_peak2_277_2164_0.26844578236487_11.2143742007965_9.28458346877371 chr14 49065289 49067368 + 9.28458346877371 NA promoter-TSS (NM_144535) promoter-TSS (NM_144535) -167 NM_144535 74385 Mm.379235 NM_144535 ENSMUSG00000036291 Ap5m1 4932432K03Rik|Mu5|Mudeng adaptor-related protein complex 5, mu 1 subunit protein-coding common_peak2_169_1103_0.369729702260679_10.2933893079085_9.28353322500066 chr9 116337314 116340846 + 9.28353322500066 NA Intergenic MTE2a|LTR|ERVL-MaLR -163717 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak2_380_3296_0.219407038656941_11.7966416909989_9.28317353704748 chr4 83313099 83317173 + 9.28317353704748 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 9053 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_53_540_-0.630664905800865_8.76415233092638_9.28173495157992 chr1 171281316 171282028 + 9.28173495157992 NA promoter-TSS (NM_008911) promoter-TSS (NM_008911) -486 NM_008911 19044 Mm.266888 NM_008911 ENSMUSG00000062729 Ppox Ppo protoporphyrinogen oxidase protein-coding common_peak1_53_540_-0.630664905800865_8.76415233092638_9.28173495157992-2 chr2 127496500 127497570 + 9.28173495157992 NA intron (NM_019789, intron 2 of 8) intron (NM_019789, intron 2 of 8) -14536 NM_001111331 56461 Mm.315292 NM_019789 ENSMUSG00000079056 Kcnip3 4933407H12Rik|AI413860|Csen|DREAM|KChIP3|R74849 Kv channel interacting protein 3, calsenilin protein-coding common_peak1_74_752_-0.526356346382261_9.2933278814808_9.28098828802301 chr4 40875002 40875977 + 9.28098828802301 NA Intergenic B1_Mur1|SINE|Alu -20952 NM_022305 14595 Mm.15622 NM_022305 ENSMUSG00000028413 B4galt1 B-1,4-GalT|B-1,4-GalT1|GalT|Ggtb|Ggtb2|b4Gal-T1|beta-1,4-GalT|beta-1,4-GalT1|beta4Gal-T1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 protein-coding common_peak2_74_752_-0.526356346382261_9.2933278814808_9.28098828802301 chr1 134110011 134112090 + 9.28098828802301 NA promoter-TSS (NM_001284525) promoter-TSS (NM_001284525) -192 NM_001284524 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding common_peak2_309_2505_0.250229403477123_11.4162854010604_9.28066418966454 chr11 43383430 43386583 + 9.28066418966454 NA Intergenic Intergenic -10545 NR_029558 387164 NR_029558 ENSMUSG00000065601 Mir146 Mirn146|miR-146a|mmu-mir-146 microRNA 146 ncRNA common_peak2_255_1936_0.283094269267339_11.0611553732369_9.28060650325417 chr8 40510498 40512723 + 9.28060650325417 NA promoter-TSS (NM_033560) promoter-TSS (NM_033560) 144 NM_001271543 18983 Mm.272551 NM_011135 ENSMUSG00000031601 Cnot7 AU022737|CAF-1|Caf1|Pop2 CCR4-NOT transcription complex, subunit 7 protein-coding common_peak2_303_2440_0.253556868361162_11.3800350139617_9.27854719987802 chr1 55051637 55054121 + 9.27854719987802 NA exon (NM_001039710, exon 1 of 5) exon (NM_001039710, exon 1 of 5) 109 NM_001039710 67876 Mm.281019 NM_026424 ENSMUSG00000025981 Coq10b 1500041J02Rik|1700030I21Rik|9530077A17Rik|AV002237|AW742641 coenzyme Q10B protein-coding common_peak1_131_1361_-0.380966417978481_10.2210277790228_9.27833068830076 chr15 102518066 102519656 + 9.27833068830076 NA intron (NM_001253795, intron 1 of 6) intron (NM_001253795, intron 1 of 6) 669 NM_009319 21357 Mm.291485 NM_009319 ENSMUSG00000023051 Tarbp2 Prbp|TRBP TARBP2, RISC loading complex RNA binding subunit protein-coding common_peak1_18_208_-1.10699492868399_7.15386166773889_9.2777595684887 chr9 13304421 13304789 + 9.2777595684887 NA Intergenic Intergenic 57626 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding unique_peak2_6_100_-1.82487135510658_5.74577580519851_9.27736874678414 chr9 46015028 46015690 + 9.27736874678414 NA intron (NM_027498, intron 1 of 24) intron (NM_027498, intron 1 of 24) 2539 NM_027498 70661 Mm.219459 NM_027498 ENSMUSG00000034135 Sik3 5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999 SIK family kinase 3 protein-coding common_peak1_168_1779_-0.32984767732435_10.6327376871916_9.2760388626267 chr19 37375243 37376568 + 9.2760388626267 NA promoter-TSS (NM_010615) promoter-TSS (NM_010615) -498 NM_010615 16551 Mm.42203 NM_010615 ENSMUSG00000012443 Kif11 Eg5|Kif8|Kifl1|Knsl1 kinesin family member 11 protein-coding common_peak2_85_865_-0.485883733286419_9.51528134808352_9.27599715220988 chr10 128695418 128697035 + 9.27599715220988 NA promoter-TSS (NM_177411) promoter-TSS (NM_177411) 42 NM_177411 19344 Mm.12815 NM_011229 ENSMUSG00000000711 Rab5b C030027M18Rik RAB5B, member RAS oncogene family protein-coding common_peak2_94_479_0.541579194666694_9.17768019294186_9.27546950826476 chr17 31038603 31040722 + 9.27546950826476 NA Intergenic Intergenic -18032 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak1_103_1056_-0.437113794369038_9.82720276419816_9.27416697167007 chr7 30551672 30552388 + 9.27416697167007 NA promoter-TSS (NR_128568) promoter-TSS (NR_128568) 242 NM_183321 333193 Mm.34885 NM_183321 ENSMUSG00000036864 Proser3 - proline and serine rich 3 protein-coding unique_peak2_13_163_-1.29759956578651_6.70875222172483_9.27411801313377 chr13 38062915 38063780 + 9.27411801313377 NA Intergenic L2a|LINE|L2 26358 NM_024242 71340 Mm.297130 NM_024242 ENSMUSG00000021428 Riok1 3110046C13Rik|5430416A05Rik|Ad034 RIO kinase 1 (yeast) protein-coding unique_peak2_13_163_-1.29759956578651_6.70875222172483_9.27411801313377-2 chrX 103393985 103394777 + 9.27411801313377 NA 3' UTR (NM_009767, exon 6 of 6) 3' UTR (NM_009767, exon 6 of 6) -20086 NM_009440 22127 Mm.358644 NM_009440 ENSMUSG00000031329 Tsx AV207184 testis specific X-linked gene protein-coding common_peak1_28_67_1.26120047326223_6.71806307788145_9.27411801313374 chr11 84129061 84129529 + 9.27411801313374 NA intron (NM_172562, intron 1 of 15) intron (NM_172562, intron 1 of 15) 273 NM_172562 217031 Mm.45159 NM_172562 ENSMUSG00000018651 Tada2a AV319371|D030022J10Rik|Tada2l transcriptional adaptor 2A protein-coding unique_peak1_24_50_1.41358985016489_6.37922026705394_9.27299331978253 chr13 96592945 96593590 + 9.27299331978253 NA intron (NM_001164222, intron 3 of 16) intron (NM_001164222, intron 3 of 16) 50532 NM_023420 68018 Mm.24125 NM_023420 ENSMUSG00000021669 Col4a3bp 2810404O15Rik|9230101K08Rik|AU016711|CERT|GPBP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein-coding common_peak1_243_1814_0.29199024053657_10.9717489531514_9.2725407571147 chr1 166378264 166380520 + 9.2725407571147 NA 5' UTR (NM_030245, exon 1 of 8) 5' UTR (NM_030245, exon 1 of 8) 225 NM_030245 27878 Mm.100665 NM_030245 ENSMUSG00000026563 Tada1 2900026B15Rik|D1Ertd251e|Staf42|Tada1l transcriptional adaptor 1 protein-coding common_peak2_239_2623_-0.269058638461312_11.2230226853874_9.2704877031979 chrX 74242940 74247633 + 9.2704877031979 NA intron (NM_001290421, intron 1 of 46) intron (NM_001290421, intron 1 of 46) 1248 NM_010227 192176 Mm.295533 NM_010227 ENSMUSG00000031328 Flna ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1 filamin, alpha protein-coding common_peak1_34_95_1.09648321380238_7.13320410762234_9.26693629782984 chr5 113472555 113473203 + 9.26693629782984 NA Intergenic MTEa|LTR|ERVL-MaLR -77541 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak1_73_741_-0.528879414223036_9.27083566950929_9.26613392980786-3 chr9 3403331 3404804 + 9.26613392980786 NA promoter-TSS (NM_027545) promoter-TSS (NM_027545) -18 NM_027545 244672 Mm.245482 NM_027545 ENSMUSG00000025898 Cwf19l2 3230401L03Rik|9030209E10 CWF19-like 2, cell cycle control (S. pombe) protein-coding common_peak1_73_741_-0.528879414223036_9.27083566950929_9.26613392980786-2 chr7 46057965 46059248 + 9.26613392980786 NA intron (NM_153057, intron 15 of 30) intron (NM_153057, intron 15 of 30) 24910 NM_153057 211548 Mm.274811 NM_153057 ENSMUSG00000030835 Nomo1 D7Ertd156e|Nomo|pM5 nodal modulator 1 protein-coding common_peak1_73_741_-0.528879414223036_9.27083566950929_9.26613392980786 chr10 41473112 41474314 + 9.26613392980786 NA Intergenic Intergenic -2601 NM_001164433 171580 Mm.290431 NM_138315 ENSMUSG00000019823 Mical1 MICAL|MICAL-1|Nical microtubule associated monooxygenase, calponin and LIM domain containing 1 protein-coding common_peak1_291_3269_-0.239531271627104_11.5553092845719_9.26469569156875 chr2 22773093 22776141 + 9.26469569156875 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 290 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak2_45_462_-0.68979526798037_8.50997074927005_9.26231236067118 chr13 21734231 21735674 + 9.26231236067118 NA promoter-TSS (NM_178210) promoter-TSS (NM_178210) -82 NM_178210 319159 NM_178210 ENSMUSG00000067455 Hist1h4j - histone cluster 1, H4j protein-coding common_peak1_89_442_0.56162806019597_9.071976918653_9.26202835316457 chr2 101678355 101679379 + 9.26202835316457 NA intron (NM_001303273, intron 1 of 6) intron (NM_001303273, intron 1 of 6) 447 NM_001303273 22034 Mm.292729 NM_009424 ENSMUSG00000027164 Traf6 2310003F17Rik|AI851288|C630032O20Rik TNF receptor-associated factor 6 protein-coding unique_peak2_33_347_-0.812794923688202_8.03654603400463_9.26031931597997 chr13 117033319 117034893 + 9.26031931597997 NA Intergenic ID_B1|SINE|B4 -8590 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding common_peak1_224_1625_0.307172682367925_10.820697883259_9.25994541066358 chr17 3081316 3082702 + 9.25994541066358 NA intron (NR_003519, intron 1 of 7) intron (NR_003519, intron 1 of 7) 2174 NR_003519 328734 Mm.335641 NR_003519 Pisd-ps2 D030013I16Rik phosphatidylserine decarboxylase, pseudogene 2 pseudo common_peak1_87_886_-0.4797679292344_9.55290632968386_9.25858553517051 chr7 27731151 27732134 + 9.25858553517051 NA 5' UTR (NM_009560, exon 1 of 5) 5' UTR (NM_009560, exon 1 of 5) 233 NM_009560 22718 Mm.66913 NM_009560 ENSMUSG00000037640 Zfp60 6330516O17Rik|AI426106|AI449354|Mfg-3|Mfg3 zinc finger protein 60 protein-coding unique_peak2_11_144_-1.39274593310919_6.48353612346034_9.25838371116402 chr3 115668710 115669633 + 9.25838371116402 NA Intergenic Intergenic 45884 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding common_peak2_132_1372_-0.379215597484739_10.2335081114047_9.25699701030704 chr12 87265646 87267588 + 9.25699701030704 NA promoter-TSS (NM_001142580) promoter-TSS (NM_001142580) -111 NM_146036 217737 Mm.22626 NM_146036 ENSMUSG00000021037 Ahsa1 BC023857|p38 AHA1, activator of heat shock protein ATPase 1 protein-coding common_peak1_51_521_-0.645872440742597_8.70496977619859_9.25442194989523 chr4 62519309 62520294 + 9.25442194989523 NA 5' UTR (NM_001276446, exon 1 of 12) 5' UTR (NM_001276446, exon 1 of 12) 108 NM_001276446 17025 Mm.6988 NM_008525 ENSMUSG00000028393 Alad ALADH|Lv aminolevulinate, delta-, dehydratase protein-coding common_peak2_22_245_-1.00405370124573_7.44048765471637_9.25209050451105 chr8 113678753 113680117 + 9.25209050451105 NA Intergenic Intergenic 36222 NM_001048145 668110 Mm.390078 NM_029139 ENSMUSG00000033409 Syce1l 4930481F22Rik|MMRP|PSESS|mmrp2 synaptonemal complex central element protein 1 like protein-coding common_peak1_64_269_0.700098923282065_8.42686505869186_9.2520081883451 chr15 82147194 82148267 + 9.2520081883451 NA intron (NM_033218, intron 1 of 18) CpG 461 NM_033218 20788 Mm.9002 NM_033218 ENSMUSG00000022463 Srebf2 AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc sterol regulatory element binding factor 2 protein-coding common_peak1_38_394_-0.752765393456605_8.24932614633616_9.25123303893468 chr1 91068922 91069639 + 9.25123303893468 NA intron (NM_001111311, intron 2 of 7) intron (NM_001111311, intron 2 of 7) 15836 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_369_3171_0.223324493572107_11.74283930249_9.25060527136462 chr8 56550099 56552508 + 9.25060527136462 NA promoter-TSS (NM_001009951) promoter-TSS (NM_001009951) 169 NM_015791 50753 Mm.251174 NM_015791 ENSMUSG00000038206 Fbxo8 Fbx8 F-box protein 8 protein-coding common_peak2_57_224_0.761494434481888_8.19452840845798_9.25014754689221 chr12 52005939 52006953 + 9.25014754689221 NA promoter-TSS (NM_029545) promoter-TSS (NM_029545) 55 NM_029545 328092 Mm.2821 NM_029545 ENSMUSG00000020956 Dtd2 4930578F06Rik|6530401N04Rik|B830049N13Rik D-tyrosyl-tRNA deacylase 2 protein-coding common_peak2_57_224_0.761494434481888_8.19452840845798_9.25014754689221-2 chr7 99960072 99961849 + 9.25014754689221 NA intron (NM_175388, intron 1 of 5) MLTR18C_MM|LTR|ERVK 19498 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding common_peak1_17_199_-1.13917082790206_7.0742707758237_9.24883825427247 chr14 30479095 30479479 + 9.24883825427247 NA promoter-TSS (NM_133761) promoter-TSS (NM_133761) -278 NM_133761 75901 Mm.28733 NM_133761 ENSMUSG00000021962 Dcp1a 1110066A22Rik|4930568L04Rik|AU019772|D14Ertd817e|Mitc1|SMIF decapping mRNA 1A protein-coding common_peak1_17_199_-1.13917082790206_7.0742707758237_9.24883825427247-2 chr3 146331309 146331817 + 9.24883825427247 NA Intergenic MLT1A1|LTR|ERVL-MaLR 47381 NR_033542 100038607 Mm.365888 NR_033542 ENSMUSG00000105602 Gm10636 ENSMUSG00000074175 predicted gene 10636 ncRNA common_peak1_167_1086_0.371175352330258_10.2717239011924_9.24861963237336 chr7 104352095 104353735 + 9.24861963237336 NA intron (NM_175677, intron 1 of 7) intron (NM_175677, intron 1 of 7) 434 NM_175677 319236 Mm.425502 NM_175677 ENSMUSG00000057143 Trim12c 9230105E10Rik|Trim12-2 tripartite motif-containing 12C protein-coding common_peak1_163_1050_0.377120933475961_10.2261074207002_9.24842144052469 chr14 19974823 19977277 + 9.24842144052469 NA intron (NM_001285908, intron 1 of 3) intron (NM_001285908, intron 1 of 3) 643 NM_001285911 14702 Mm.41737 NM_010315 ENSMUSG00000043004 Gng2 - guanine nucleotide binding protein (G protein), gamma 2 protein-coding common_peak2_407_3609_0.209724588911991_11.9226454162305_9.24576944963232 chr13 41483487 41488868 + 9.24576944963232 NA intron (NM_001111324, intron 1 of 7) intron (NM_001111324, intron 1 of 7) 1183 NM_001111324 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak2_113_626_0.478789397934491_9.53171633176929_9.2456596203107 chr5 35728095 35729813 + 9.2456596203107 NA 5' UTR (NM_194344, exon 1 of 18) 5' UTR (NM_194344, exon 1 of 18) 322 NM_194344 231147 Mm.290429 NM_194344 ENSMUSG00000036553 Sh3tc1 4631428G15|BC024909 SH3 domain and tetratricopeptide repeats 1 protein-coding unique_peak2_14_172_-1.25258410622538_6.80833617452404_9.24114992092045 chr2 30363641 30364769 + 9.24114992092045 NA promoter-TSS (NM_001242407) promoter-TSS (NM_001242407) -28 NM_001242407 108958 Mm.254974 NM_175392 ENSMUSG00000026858 Miga2 5730472N09Rik|AA408683|AI790341|C9orf54|Fam73b|R74766 mitoguardin 2 protein-coding common_peak1_14_172_-1.25258410622538_6.80833617452404_9.24114992092045 chr4 59199084 59199468 + 9.24114992092045 NA intron (NM_011673, intron 1 of 8) (TTTG)n|Simple_repeat|Simple_repeat 9726 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak1_84_855_-0.489825138548655_9.49655441712682_9.24008092151415 chr2 164460752 164461543 + 9.24008092151415 NA intron (NM_025575, intron 1 of 3) CpG 176 NM_025575 66460 Mm.44218 NM_025575 ENSMUSG00000045503 Sys1 2610042O14Rik|AI266964|C87389 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein-coding common_peak1_21_235_-1.02284530666789_7.3712203960279_9.23783497839768 chr7 34655176 34655742 + 9.23783497839768 NA Intergenic CpG -2618 NM_146188 233107 Mm.486198 NM_146188 ENSMUSG00000030499 Kctd15 BC031749 potassium channel tetramerisation domain containing 15 protein-coding common_peak1_34_356_-0.798334549505565_8.08061298927632_9.23643319322404 chr7 41632868 41633531 + 9.23643319322404 NA promoter-TSS (NM_023363) promoter-TSS (NM_023363) -332 NM_023363 67607 Mm.384626 NM_023363 ENSMUSG00000074165 Zfp788 2810426N06Rik|AI256342|AI605193 zinc finger protein 788 protein-coding common_peak2_336_3844_-0.219585067705559_11.7989753489964_9.23628667181796 chr17 28011965 28017268 + 9.23628667181796 NA intron (NM_001286040, intron 12 of 24) intron (NM_001286040, intron 12 of 24) 65968 NM_013687 21463 Mm.29758 NM_013687 ENSMUSG00000062859 Tcp11 D17Ken1|Tcp-11 t-complex protein 11 protein-coding common_peak1_255_1937_0.282349652455512_11.0615276816428_9.23584252916002 chr13 41604971 41607185 + 9.23584252916002 NA promoter-TSS (NM_001163572) promoter-TSS (NM_001163572) -138 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak2_294_2345_0.257644693891637_11.3248096449743_9.23494242393224 chr3 157946326 157948438 + 9.23494242393224 NA promoter-TSS (NM_001013806) promoter-TSS (NM_001013806) -84 NM_001013806 433667 Mm.265806 NM_001013806 ENSMUSG00000039988 Ankrd13c AI505652|AU022220 ankyrin repeat domain 13c protein-coding common_peak2_198_1374_0.331765890548034_10.5910988485734_9.23387977514556 chr15 74954462 74957299 + 9.23387977514556 NA intron (NM_001164039, intron 2 of 4) intron (NM_001164039, intron 2 of 4) 774 NM_001164040 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak2_212_1508_0.317916971473618_10.7183355762635_9.2336859741861 chr2 167128506 167130848 + 9.2336859741861 NA intron (NM_008420, intron 1 of 1) intron (NM_008420, intron 1 of 1) 59141 NM_008420 16500 Mm.205341 NM_008420 ENSMUSG00000050556 Kcnb1 Kcr1-1|Kv2.1|Shab potassium voltage gated channel, Shab-related subfamily, member 1 protein-coding common_peak1_187_1270_0.344607394793773_10.4840520124018_9.23224270706059 chr18 10725308 10727009 + 9.23224270706059 NA 5' UTR (NM_144860, exon 1 of 21) 5' UTR (NM_144860, exon 1 of 21) 533 NM_144860 225164 Mm.21500 NM_144860 ENSMUSG00000024294 Mib1 DIP-1|E430019M12Rik|Mib|mKIAA1323 mindbomb E3 ubiquitin protein ligase 1 protein-coding common_peak1_131_773_0.434354813889181_9.813367163089_9.2318033305282 chr13 113793852 113795330 + 9.2318033305282 NA promoter-TSS (NM_172595) promoter-TSS (NM_172595) 83 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding unique_peak2_16_190_-1.17389256706158_6.99048254450496_9.23158086668887-2 chr2 147030022 147031339 + 9.23158086668887 NA intron (NM_011917, intron 13 of 29) intron (NM_011917, intron 13 of 29) 17620 NM_011917 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding unique_peak2_16_190_-1.17389256706158_6.99048254450496_9.23158086668887 chr14 25161302 25162686 + 9.23158086668887 NA Intergenic Intergenic -18753 NR_045718 75862 Mm.109191 NR_045718 4930572O13Rik - RIKEN cDNA 4930572O13 gene ncRNA unique_peak2_15_181_-1.21154137707353_6.90202395166193_9.22812065915377 chr13 55185716 55186743 + 9.22812065915377 NA Intergenic MMVL30-int|LTR|ERV1 -23553 NM_008739 18193 Mm.12964 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak2_447_4082_0.197600142538199_12.0942139234942_9.22779723223461 chr5 103752248 103755979 + 9.22779723223461 NA promoter-TSS (NM_133919) promoter-TSS (NM_133919) -49 NM_133919 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak1_31_81_1.16531356969344_6.9402087894648_9.22758821629028 chr15 84192917 84193531 + 9.22758821629028 NA intron (NM_178614, intron 1 of 14) intron (NM_178614, intron 1 of 14) 991 NM_178614 68653 Mm.290725 NM_178614 ENSMUSG00000022437 Samm50 1110030L07Rik SAMM50 sorting and assembly machinery component protein-coding common_peak2_243_1815_0.291195586128769_10.9721462803553_9.22632276411153 chr7 114414358 114418046 + 9.22632276411153 NA exon (NM_011055, exon 1 of 16) exon (NM_011055, exon 1 of 16) 948 NM_011055 18576 Mm.430730 NM_011055 ENSMUSG00000030671 Pde3b 9830102A01Rik|AI847709 phosphodiesterase 3B, cGMP-inhibited protein-coding common_peak2_40_126_0.97275857829326_7.4750639759188_9.22587908341361-2 chr7 19180642 19181727 + 9.22587908341361 NA promoter-TSS (NM_001162996) promoter-TSS (NM_001162996) 14 NM_028153 72205 Mm.154121 NM_028153 ENSMUSG00000040811 Eml2 1600029N02Rik|EMAP-2 echinoderm microtubule associated protein like 2 protein-coding common_peak2_40_126_0.97275857829326_7.4750639759188_9.22587908341361 chr12 8520873 8521787 + 9.22587908341361 NA Intergenic Intergenic 18236 NM_001038660 328059 Mm.46326 NM_177802 ENSMUSG00000020600 Slc7a15 Arpat solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 protein-coding common_peak1_153_962_0.391941864115964_10.1073629199014_9.2255149551856 chr11 75461609 75462747 + 9.2255149551856 NA intron (NR_030711, intron 1 of 2) CpG 639 NR_030711 100042498 Mm.482242 NR_030711 ENSMUSG00000085148 Mir22hg 2210403K04Rik|mir-22 Mir22 host gene (non-protein coding) ncRNA common_peak1_173_1141_0.362063206489365_10.3383785386075_9.22418618321356 chr5 108268199 108269691 + 9.22418618321356 NA promoter-TSS (NM_026106) promoter-TSS (NM_026106) 48 NM_026106 13486 Mm.303534 NM_026106 ENSMUSG00000029265 Dr1 1700121L09Rik|Dr1l|NC2|NC2beta down-regulator of transcription 1 protein-coding common_peak1_56_569_-0.610319389501932_8.84965841430114_9.22160932367984 chr13 104286777 104287896 + 9.22160932367984 NA promoter-TSS (NM_001081020) promoter-TSS (NM_001081020) -537 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak1_188_2010_-0.307953690200286_10.8197205212052_9.22100401942606 chr11 96463466 96465217 + 9.22100401942606 NA promoter-TSS (NM_001177899) promoter-TSS (NM_001177899) 206 NR_033524 100038600 Mm.483549 NR_033524 Gm11529 OTTMUSG00000001775 predicted gene 11529 ncRNA common_peak2_126_732_0.444541306040234_9.73994004115393_9.21755562107472 chr10 44002599 44004693 + 9.21755562107472 NA exon (NM_172393, exon 1 of 20) exon (NM_172393, exon 1 of 20) 1200 NM_172393 11630 Mm.292082 NM_172393 ENSMUSG00000019866 Aim1 AI462491|AI463325 absent in melanoma 1 protein-coding common_peak1_357_3036_0.227725703441665_11.6822940448883_9.21754411703427 chr15 12320853 12322717 + 9.21754411703427 NA exon (NM_025673, exon 1 of 4) exon (NM_025673, exon 1 of 4) 289 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding common_peak1_35_365_-0.784402165225019_8.12349875567153_9.21699134643243 chr1 131184081 131184673 + 9.21699134643243 NA intron (NM_018750, intron 2 of 5) intron (NM_018750, intron 2 of 5) 15808 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak1_35_365_-0.784402165225019_8.12349875567153_9.21699134643243-2 chr11 45955096 45955702 + 9.21699134643243 NA promoter-TSS (NM_001290737) promoter-TSS (NM_001290737) 104 NM_001080969 66628 Mm.269083 NM_001080969 ENSMUSG00000011254 Thg1l - tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) protein-coding common_peak2_35_365_-0.784402165225019_8.12349875567153_9.21699134643243 chr16 17233119 17234352 + 9.21699134643243 NA intron (NM_178922, intron 1 of 2) CpG 148 NM_178922 58180 Mm.261602 NM_178922 ENSMUSG00000050240 Hic2 AA409108|HRG22|mKIAA1020 hypermethylated in cancer 2 protein-coding common_peak1_62_256_0.715984610757904_8.36361685457283_9.21692003963438-2 chr9 90252833 90253751 + 9.21692003963438 NA intron (NM_194334, intron 1 of 12) intron (NM_194334, intron 1 of 12) 17477 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak1_62_256_0.715984610757904_8.36361685457283_9.21692003963438 chr8 25097949 25098890 + 9.21692003963438 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 3392 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak1_31_328_-0.839078199423717_7.94240467402338_9.21526792718253-2 chr7 45704279 45704793 + 9.21526792718253 NA promoter-TSS (NM_016974) promoter-TSS (NM_016974) -711 NM_016974 13170 Mm.24222 NM_016974 ENSMUSG00000059824 Dbp - D site albumin promoter binding protein protein-coding common_peak1_31_328_-0.839078199423717_7.94240467402338_9.21526792718253 chr3 152907233 152907842 + 9.21526792718253 NA intron (NM_012028, intron 2 of 4) intron (NM_012028, intron 2 of 4) 74670 NM_012028 26938 Mm.40915 NM_012028 ENSMUSG00000039037 St6galnac5 AI851940|Siat7e ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding common_peak2_126_1305_-0.388728487372386_10.1565749378602_9.21416881794528 chr5 147859857 147861727 + 9.21416881794528 NA intron (NM_025624, intron 1 of 5) CpG 164 NM_025624 66537 Mm.332855 NM_025624 ENSMUSG00000029649 Pomp 2510048O06Rik|Ump1 proteasome maturation protein protein-coding common_peak2_154_971_0.389975288006847_10.1198001476092_9.20839848630023 chr8 33731178 33733559 + 9.20839848630023 NA promoter-TSS (NM_001167922) promoter-TSS (NM_001167922) 29 NM_001167922 68153 Mm.286104 NM_026584 ENSMUSG00000031585 Gtf2e2 34kDa|AI462509|C330006J08Rik general transcription factor II E, polypeptide 2 (beta subunit) protein-coding common_peak1_201_2164_-0.296690804822276_10.9318059072029_9.20819318721547 chr1 173436229 173437809 + 9.20819318721547 NA intron (NM_001013779, intron 2 of 8) intron (NM_001013779, intron 2 of 8) 16415 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_112_1151_-0.414405503269911_9.96272224980736_9.20781554682602 chr15 98984830 98986467 + 9.20781554682602 NA promoter-TSS (NR_045991) promoter-TSS (NR_045991) -317 NR_045991 75951 Mm.441657 NR_045991 ENSMUSG00000097587 4930578M01Rik 3010001K12Rik RIKEN cDNA 4930578M01 gene ncRNA common_peak1_195_1346_0.334566723821094_10.5628174973728_9.2072488299049 chr14 29967609 29969125 + 9.2072488299049 NA promoter-TSS (NM_019979) promoter-TSS (NM_019979) -13 NM_019979 80795 Mm.104491 NM_019979 ENSMUSG00000042682 Selenok 1110001C03Rik|AA673253|HSPC030|Hsp30|Selk selenoprotein K protein-coding common_peak1_195_2093_-0.301944867647412_10.8810732931071_9.20661686327882 chr9 106821794 106823279 + 9.20661686327882 NA intron (NM_001015507, intron 1 of 22) CpG 560 NM_001015507 321006 Mm.440089 NM_001015507 ENSMUSG00000040325 Vprbp AI447437|B930007L02Rik|mKIAA0800 Vpr (HIV-1) binding protein protein-coding common_peak1_144_1505_-0.359737153281039_10.3766374780314_9.20426679173362 chr1 138143983 138146576 + 9.20426679173362 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 29847 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_54_206_0.78780406088659_8.08738898794262_9.20389180127593 chr11 120351203 120352249 + 9.20389180127593 NA TTS (NR_038126) TTS (NR_038126) 3048 NR_038126 66838 Mm.375010 NR_038126 ENSMUSG00000043644 0610009L18Rik - RIKEN cDNA 0610009L18 gene ncRNA common_peak1_77_782_-0.513312736496824_9.35621212904263_9.20386038353173 chr5 137778639 137779606 + 9.20386038353173 NA exon (NM_027242, exon 1 of 4) exon (NM_027242, exon 1 of 4) 204 NM_027242 69871 Mm.276058 NM_027242 ENSMUSG00000029725 Ppp1r35 2010007H12Rik|2010011D20Rik|AL024004 protein phosphatase 1, regulatory subunit 35 protein-coding common_peak2_141_1471_-0.363790099023639_10.3416669065452_9.20360449137463 chr16 78604694 78608552 + 9.20360449137463 NA Intergenic MTE2a|LTR|ERVL-MaLR -29935 NM_025967 67102 Mm.37332 NM_025967 ENSMUSG00000022864 D16Ertd472e 1700010I10Rik|2310009O17Rik|E330003K22Rik|Eurl DNA segment, Chr 16, ERATO Doi 472, expressed protein-coding common_peak2_135_807_0.425161711781445_9.87079233864252_9.20320837441789 chr3 84581276 84583613 + 9.20320837441789 NA 5' UTR (NM_001081093, exon 1 of 9) 5' UTR (NM_001081093, exon 1 of 9) 181 NM_001081093 99889 Mm.316536 NM_001081093 ENSMUSG00000074513 Arfip1 2310030I10Rik|Arfaptin|D3Ertd598e ADP-ribosylation factor interacting protein 1 protein-coding unique_peak1_23_46_1.45918661641446_6.28418215988487_9.20255360271466 chr1 92846333 92846890 + 9.20255360271466 NA intron (NM_016696, intron 1 of 8) intron (NM_016696, intron 1 of 8) -3767 NR_029559 387167 NR_029559 ENSMUSG00000065470 Mir149 Mirn149|mir-149|mmu-mir-149 microRNA 149 ncRNA common_peak1_307_2485_0.250335582093294_11.4047783720991_9.20175903128939 chr19 7557393 7561956 + 9.20175903128939 NA intron (NM_139269, intron 2 of 4) B1_Mur4|SINE|Alu 2215 NM_139269 225845 Mm.274810 NM_139269 ENSMUSG00000060675 Pla2g16 C78643|HRSL3|Hrasls3|Hrev107|MLP-3 phospholipase A2, group XVI protein-coding common_peak1_280_2197_0.265615816251829_11.2347835790751_9.19985136621762 chr11 48978678 48981179 + 9.19985136621762 NA promoter-TSS (NM_173434) promoter-TSS (NM_173434) -530 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5|OTTMUSG00000005540 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak1_290_2303_0.259547878074381_11.2996989404795_9.19564821717847 chr3 157946521 157948195 + 9.19564821717847 NA promoter-TSS (NM_001013806) promoter-TSS (NM_001013806) -108 NM_001013806 433667 Mm.265806 NM_001013806 ENSMUSG00000039988 Ankrd13c AI505652|AU022220 ankyrin repeat domain 13c protein-coding common_peak2_122_1260_-0.394774779109509_10.1029651707735_9.19446784600755 chr9 61962320 61966259 + 9.19446784600755 NA intron (NM_028748, intron 5 of 7) intron (NM_028748, intron 5 of 7) -17490 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding common_peak1_87_885_-0.478140523488355_9.55209262681084_9.19263894593543 chr10 128094009 128095218 + 9.19263894593543 NA intron (NM_054078, intron 1 of 29) intron (NM_054078, intron 1 of 29) 1830 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak1_41_423_-0.723833499578344_8.36600370477403_9.19015450271634 chr7 67529895 67530864 + 9.19015450271634 NA intron (NM_175124, intron 8 of 9) intron (NM_175124, intron 8 of 9) 114857 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak1_82_392_0.591120366909742_8.91394568571348_9.18995752456883 chr4 53914719 53915951 + 9.18995752456883 NA Intergenic Intergenic 89290 NM_028053 52076 Mm.27184 NM_028053 ENSMUSG00000028420 Tmem38b 1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b transmembrane protein 38B protein-coding common_peak1_108_587_0.492069890693273_9.445707290183_9.18960071915395 chrX 20662862 20663869 + 9.18960071915395 NA intron (NM_001136085, intron 1 of 25) intron (NM_001136085, intron 1 of 25) 469 NM_001136085 22201 Mm.1104 NM_009457 ENSMUSG00000001924 Uba1 A1S9|Sbx|Ube-1|Ube1x ubiquitin-like modifier activating enzyme 1 protein-coding common_peak2_130_765_0.435886679921916_9.79914392188591_9.18955989497784 chr15 79440916 79442790 + 9.18955989497784 NA promoter-TSS (NM_001289899) promoter-TSS (NM_001289899) -35 NM_001289899 27373 Mm.30199 NM_013767 ENSMUSG00000022433 Csnk1e AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau casein kinase 1, epsilon protein-coding common_peak1_61_250_0.721750961969891_8.33241903493572_9.18848580824549 chr12 83921220 83921945 + 9.18848580824549 NA intron (NR_073563, intron 1 of 10) CpG 352 NR_073563 18222 Mm.4390 NM_010949 ENSMUSG00000021224 Numb Nb numb homolog (Drosophila) protein-coding common_peak2_42_137_0.937202713475782_7.57712581351606_9.18731923029036 chr11 86810977 86812007 + 9.18731923029036 NA intron (NR_106195, intron 2 of 8) intron (NR_106195, intron 2 of 8) -3832 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding common_peak1_29_309_-0.867467972676535_7.84239041893597_9.18717376971589 chr12 75668959 75669537 + 9.18717376971589 NA intron (NM_028203, intron 1 of 1) intron (NM_028203, intron 1 of 1) 289 NM_028203 72338 Mm.341719 NM_028203 ENSMUSG00000045690 Wdr89 2600001A11Rik WD repeat domain 89 protein-coding common_peak2_52_194_0.808411451693502_8.01153603959636_9.18558313744232 chr15 36360570 36361958 + 9.18558313744232 NA Intergenic Intergenic -78117 NM_013923 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak1_52_194_0.808411451693502_8.01153603959636_9.18558313744232 chr14 67046843 67048004 + 9.18558313744232 NA intron (NM_001205188, intron 2 of 9) intron (NM_001205188, intron 2 of 9) 25048 NM_028032 71978 Mm.273997 NM_028032 ENSMUSG00000022052 Ppp2r2a 2410004D02Rik|mKIAA1541 protein phosphatase 2, regulatory subunit B, alpha protein-coding common_peak1_220_1587_0.309545978906048_10.787768186596_9.18483651178871 chr12 102742915 102744535 + 9.18483651178871 NA promoter-TSS (NM_177140) promoter-TSS (NM_177140) -35 NM_177140 320351 Mm.86546 NM_177140 ENSMUSG00000046675 Tmem251 D230037D09Rik transmembrane protein 251 protein-coding common_peak1_518_4951_0.179549448431569_12.36357032343_9.1836859542222 chr7 127216355 127220180 + 9.1836859542222 NA intron (NM_017461, intron 1 of 10) intron (NM_017461, intron 1 of 10) 178 NM_017461 54204 Mm.18 NM_017461 ENSMUSG00000000486 Sept1 Diff6|Pnutl3 septin 1 protein-coding common_peak1_65_659_-0.562389955398579_9.08512723654653_9.17998583009579 chr16 32246206 32247137 + 9.17998583009579 NA promoter-TSS (NM_026898) promoter-TSS (NM_026898) 354 NM_173439 268882 Mm.256137 NM_173439 ENSMUSG00000035764 Fbxo45 2610017J04Rik|AI463119|BC026799 F-box protein 45 protein-coding common_peak2_65_659_-0.562389955398579_9.08512723654653_9.17998583009579 chr7 101107729 101109918 + 9.17998583009579 NA promoter-TSS (NM_001146010) promoter-TSS (NM_001146010) 48 NM_199012 207278 Mm.263041 NM_199012 ENSMUSG00000030691 Fchsd2 BC034086|R74866|Sh3md3|mKIAA0769 FCH and double SH3 domains 2 protein-coding common_peak2_27_290_-0.898310592890358_7.7357200464631_9.17991781017753 chr1 171222629 171223511 + 9.17991781017753 NA promoter-TSS (NM_001037170) promoter-TSS (NM_001037170) -556 NM_001037170 641376 Mm.288374 NM_001037170 ENSMUSG00000005674 Tomm40l - translocase of outer mitochondrial membrane 40 homolog-like (yeast) protein-coding common_peak1_41_132_0.948804519483665_7.52968469524302_9.17987500856735 chr13 41466856 41467596 + 9.17987500856735 NA intron (NM_001111324, intron 1 of 7) intron (NM_001111324, intron 1 of 7) 20134 NM_001111324 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak2_221_1597_0.308478785623075_10.7962910857395_9.1789760946802 chr8 94011343 94013499 + 9.1789760946802 NA exon (NM_011787, exon 1 of 14) exon (NM_011787, exon 1 of 14) 219 NM_011787 23802 Mm.34641 NM_011787 ENSMUSG00000031751 Amfr gp78 autocrine motility factor receptor protein-coding common_peak1_136_816_0.422145288389176_9.88526491234027_9.17780878842314 chr6 108664570 108665648 + 9.17780878842314 NA exon (NM_011498, exon 5 of 5) exon (NM_011498, exon 5 of 5) -4175 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_233_2547_-0.271459285308799_11.1794199196019_9.17593573591189 chr2 181580525 181582188 + 9.17593573591189 NA TTS (NM_001164597) TTS (NM_001164597) 617 NM_026765 68556 Mm.232400 NM_026765 ENSMUSG00000089917 Uckl1 1110007H10Rik|Urkl1 uridine-cytidine kinase 1-like 1 protein-coding common_peak1_12_153_-1.33797760724032_6.59779773707474_9.17581042177853 chr15 42675994 42676371 + 9.17581042177853 NA exon (NM_001286062, exon 1 of 9) exon (NM_001286062, exon 1 of 9) 795 NM_001286062 11600 Mm.309336 NM_009640 ENSMUSG00000022309 Angpt1 1110046O21Rik|Ang-1|Ang1 angiopoietin 1 protein-coding common_peak2_545_5290_0.173767167652347_12.4562082862335_9.17290237004737 chr2 31135119 31145023 + 9.17290237004737 NA intron (NM_001177648, intron 1 of 16) B1F|SINE|Alu 1937 NM_001177649 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_81_822_-0.496693044169843_9.4364020983367_9.17233978724043 chr12 70452613 70453790 + 9.17233978724043 NA promoter-TSS (NM_028339) promoter-TSS (NM_028339) 47 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding common_peak1_118_1216_-0.402041082474085_10.0480929114767_9.17221339932053 chr1 175624954 175626130 + 9.17221339932053 NA promoter-TSS (NM_010209) promoter-TSS (NM_010209) 93 NM_010209 14194 Mm.41502 NM_010209 ENSMUSG00000026526 Fh1 Fh|Fh-1 fumarate hydratase 1 protein-coding common_peak1_153_1606_-0.346820361715672_10.4767440328173_9.17171414685562 chr14 54480191 54482528 + 9.17171414685562 NA TTS (NM_080726) TTS (NM_080726) 5259 NM_080726 140743 Mm.274727 NM_080726 ENSMUSG00000022176 Rem2 AW411893 rad and gem related GTP binding protein 2 protein-coding common_peak2_48_490_-0.662702977404008_8.60822772561269_9.17124123589017 chr2 128499062 128500892 + 9.17124123589017 NA Intergenic Intergenic -70626 NR_028590 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_29_72_1.21883187371769_6.79924049573886_9.17122675644101 chr11 32425238 32425793 + 9.17122675644101 NA 3' UTR (NM_177364, exon 13 of 13) 3' UTR (NM_177364, exon 13 of 13) -29857 NM_173784 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding common_peak1_91_927_-0.46629556866135_9.6248332107969_9.16936457626016 chr12 69363826 69365004 + 9.16936457626016 NA Intergenic Intergenic -7239 NM_025441 66244 Mm.46705 NM_025441 ENSMUSG00000020982 Nemf 1500011I12Rik|4933405E14Rik|Sdccag1 nuclear export mediator factor protein-coding common_peak2_113_627_0.476490281844903_9.53286588981408_9.16737465347886 chrX 20662683 20664144 + 9.16737465347886 NA intron (NM_001136085, intron 1 of 25) intron (NM_001136085, intron 1 of 25) 517 NM_001136085 22201 Mm.1104 NM_009457 ENSMUSG00000001924 Uba1 A1S9|Sbx|Ube-1|Ube1x ubiquitin-like modifier activating enzyme 1 protein-coding common_peak2_419_3752_0.204976278162555_11.9763167139683_9.16524548515723 chr15 64074055 64078756 + 9.16524548515723 NA Intergenic Intergenic -15957 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_433_3917_0.200928942918544_12.0363661537269_9.16418998641205 chr3 51276203 51278285 + 9.16418998641205 NA non-coding (NR_073429, exon 1 of 1) non-coding (NR_073429, exon 1 of 1) 270 NM_001291062 69257 Mm.131038 NM_023502 ENSMUSG00000037174 Elf2 2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2 E74-like factor 2 protein-coding unique_peak2_8_117_-1.60456999867553_6.08035805002408_9.16353747428342 chr4 134273314 134274341 + 9.16353747428342 NA Intergenic Intergenic 13426 NM_001163794 230809 Mm.22778 NM_146156 ENSMUSG00000050890 Pdik1l BC027088|stk35l2 PDLIM1 interacting kinase 1 like protein-coding common_peak2_183_1234_0.34800241118054_10.4442965320623_9.16350771418628 chr8 33384126 33386419 + 9.16350771418628 NA intron (NM_001122822, intron 1 of 33) intron (NM_001122822, intron 1 of 33) 255 NM_001122822 22427 Mm.228805 NM_011721 ENSMUSG00000031583 Wrn AI846146 Werner syndrome homolog (human) protein-coding common_peak1_116_1194_-0.405716937106966_10.0199364343146_9.16324462016074 chr2 180273718 180275077 + 9.16324462016074 NA promoter-TSS (NM_145851) promoter-TSS (NM_145851) -932 NM_145851 252966 Mm.386884 NM_145851 ENSMUSG00000038990 Cables2 ik3-2 CDK5 and Abl enzyme substrate 2 protein-coding unique_peak1_19_31_1.69113422763078_5.84556711381539_9.16145308724845-2 chr15 25892370 25892858 + 9.16145308724845 NA intron (NM_001034851, intron 2 of 8) L1_Mus2|LINE|L1 -40938 NM_001277318 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Fam134b 1810015C04Rik|AU015349 family with sequence similarity 134, member B protein-coding unique_peak1_19_31_1.69113422763078_5.84556711381539_9.16145308724845-3 chr3 95652059 95652510 + 9.16145308724845 NA Intergenic B1F1|SINE|Alu -6437 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding unique_peak1_19_31_1.69113422763078_5.84556711381539_9.16145308724845 chr11 83788867 83789382 + 9.16145308724845 NA Intergenic Intergenic 35487 NM_145432 217026 Mm.117874 NM_145432 ENSMUSG00000000976 Heatr6 2700008B19Rik|BB135312|BB249351 HEAT repeat containing 6 protein-coding common_peak1_19_31_1.69113422763078_5.84556711381539_9.16145308724845 chr13 51652542 51653010 + 9.16145308724845 NA intron (NM_001308448, intron 2 of 16) intron (NM_001308448, intron 2 of 16) 1068 NM_029279 75420 Mm.275981 NM_029279 ENSMUSG00000035139 Secisbp2 2210413N07Rik|2810012K13Rik|SBP2 SECIS binding protein 2 protein-coding common_peak1_19_31_1.69113422763078_5.84556711381539_9.16145308724845-2 chr5 122130021 122130501 + 9.16145308724845 NA intron (NM_183307, intron 3 of 12) intron (NM_183307, intron 3 of 12) 4632 NM_001289811 330188 Mm.386907 NM_183307 ENSMUSG00000043036 Ccdc63 4921511C16Rik coiled-coil domain containing 63 protein-coding common_peak1_46_471_-0.679511961935823_8.54288706839393_9.16111110696741 chr15 80010981 80011938 + 9.16111110696741 NA intron (NM_011057, intron 1 of 6) intron (NM_011057, intron 1 of 6) 3349 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak1_37_384_-0.761738120999017_8.20784557508276_9.16023762812634 chr12 100988579 100989283 + 9.16023762812634 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 32837 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak2_150_936_0.396615147326365_10.0702128113224_9.15979013345709 chr4 134766625 134768459 + 9.15979013345709 NA intron (NM_145554, intron 1 of 8) CpG 462 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak1_143_876_0.408089262987003_9.98047766393823_9.1595456899355 chr2 153632221 153633394 + 9.1595456899355 NA promoter-TSS (NM_133850) promoter-TSS (NM_133850) -26 NM_133850 99311 Mm.294478 NM_133850 ENSMUSG00000056941 Commd7 2310010I22Rik|AW060956|mU3 COMM domain containing 7 protein-coding common_peak2_33_346_-0.808643280417733_8.03447021236939_9.15558405514397 chr15 75981181 75981962 + 9.15558405514397 NA exon (NM_146059, exon 2 of 2) exon (NM_146059, exon 2 of 2) 714 NM_001163518 223648 Mm.17610 NM_146059 ENSMUSG00000098176 Ccdc166 2410075B13Rik coiled-coil domain containing 166 protein-coding common_peak1_27_63_1.28656475001793_6.64328237500896_9.15522985496158 chr11 54775664 54776277 + 9.15522985496158 NA intron (NM_178626, intron 1 of 5) intron (NM_178626, intron 1 of 5) 11733 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding unique_peak1_27_63_1.28656475001793_6.64328237500896_9.15522985496158 chr4 132072805 132073324 + 9.15522985496158 NA promoter-TSS (NM_183428) promoter-TSS (NM_183428) -967 NM_183428 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding common_peak1_25_272_-0.93733589627892_7.62408919278039_9.15431331550375 chr2 165531316 165531947 + 9.15431331550375 NA Intergenic Intergenic 27734 NM_130451 170441 Mm.34147 NM_130451 ENSMUSG00000027661 Slc2a10 AA450473|Glut10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding common_peak1_38_393_-0.749108369848515_8.24749763453212_9.15287210763705 chr4 152361740 152362317 + 9.15287210763705 NA intron (NM_029216, intron 9 of 40) intron (NM_029216, intron 9 of 40) 23377 NM_001081376 269610 Mm.40192 NM_029216 ENSMUSG00000005045 Chd5 4930532L22Rik|AW060752|B230399N07Rik|CHD-5 chromodomain helicase DNA binding protein 5 protein-coding common_peak2_71_719_-0.533943112084295_9.22488154028753_9.15147498577705 chr4 32073459 32075360 + 9.15147498577705 NA Intergenic B3|SINE|B2 110302 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_75_343_0.627324071067505_8.73992679023585_9.15132795244562 chr1 78657803 78658680 + 9.15132795244562 NA promoter-TSS (NM_001136226) promoter-TSS (NM_001136226) -199 NM_001136226 195434 Mm.276016 NM_001001981 ENSMUSG00000079470 Utp14b 4932411L21Rik|jsd UTP14B small subunit processome component protein-coding common_peak2_112_1150_-0.413152619959829_9.96209580815232_9.15006620909475 chr15 102624370 102626280 + 9.15006620909475 NA 5' UTR (NM_001310066, exon 1 of 12) 5' UTR (NM_001310066, exon 1 of 12) 139 NM_001310070 223922 Mm.208714 NM_146065 ENSMUSG00000052414 Atf7 1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik activating transcription factor 7 protein-coding common_peak1_204_2198_-0.293083036911222_10.9560903703994_9.1482084734505 chr1 171410834 171412536 + 9.1482084734505 NA promoter-TSS (NM_009480) promoter-TSS (NM_009480) 4 NM_009480 22278 Mm.8 NM_009480 ENSMUSG00000026641 Usf1 bHLHb11 upstream transcription factor 1 protein-coding unique_peak1_20_35_1.60754964235619_5.97369982262041_9.14759596253433 chr13 73735246 73735790 + 9.14759596253433 NA Intergenic Intergenic -28179 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak1_20_35_1.60754964235619_5.97369982262041_9.14759596253433-2 chr13 34076807 34077388 + 9.14759596253433 NA intron (NM_009450, intron 1 of 3) intron (NM_009450, intron 1 of 3) 911 NM_009450 22151 Mm.422827 NM_009450 ENSMUSG00000058672 Tubb2a M(beta)2|Tubb2 tubulin, beta 2A class IIA protein-coding common_peak1_20_35_1.60754964235619_5.97369982262041_9.14759596253433 chr11 83571144 83571636 + 9.14759596253433 NA Intergenic B2_Mm2|SINE|B2 7246 NM_011338 20308 Mm.416125 NM_011338 ENSMUSG00000019122 Ccl9 CCF18|MRP-2|Scya10|Scya9 chemokine (C-C motif) ligand 9 protein-coding unique_peak1_20_35_1.60754964235619_5.97369982262041_9.14759596253433-2 chr17 3326551 3327013 + 9.14759596253433 NA intron (NM_001122998, intron 1 of 26) CpG 209 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak2_212_2293_-0.286355614015523_11.0204718690081_9.1461495224689 chr1 184032917 184035355 + 9.1461495224689 NA promoter-TSS (NM_028516) promoter-TSS (NM_028516) -138 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak1_30_318_-0.850730409030563_7.89204740924959_9.14439667830766 chr9 92385130 92385634 + 9.14439667830766 NA Intergenic Intergenic -71996 NM_178711 235527 Mm.55289 NM_178711 ENSMUSG00000032377 Plscr4 AV245873 phospholipid scramblase 4 protein-coding common_peak1_18_207_-1.1000755147442_7.15040196076899_9.14329899386077 chr15 96583411 96583908 + 9.14329899386077 NA intron (NM_134086, intron 12 of 15) intron (NM_134086, intron 12 of 15) 58303 NM_134086 105727 Mm.103568 NM_134086 ENSMUSG00000023169 Slc38a1 AA408026|AA409865|AL022800|AU015942|NAT2 solute carrier family 38, member 1 protein-coding common_peak1_18_207_-1.1000755147442_7.15040196076899_9.14329899386077-2 chr7 72270274 72270675 + 9.14329899386077 NA intron (NM_001024703, intron 1 of 22) intron (NM_001024703, intron 1 of 22) 36121 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak1_36_106_1.03831666481026_7.26062531880628_9.14328245892468 chr14 14632261 14632898 + 9.14328245892468 NA Intergenic Intergenic -70446 NM_001033270 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding common_peak2_101_533_0.513587156626258_9.31748951000068_9.14081485209324-2 chr6 34316677 34318345 + 9.14081485209324 NA promoter-TSS (NR_037965) promoter-TSS (NR_037965) -22 NM_009658 11677 Mm.451 NM_009658 ENSMUSG00000001642 Akr1b3 ALR2|AR|Ahr-1|Ahr1|Akr1b1|Aldor1|Aldr1 aldo-keto reductase family 1, member B3 (aldose reductase) protein-coding common_peak2_101_533_0.513587156626258_9.31748951000068_9.14081485209324 chr5 41843500 41845782 + 9.14081485209324 NA promoter-TSS (NM_001081422) promoter-TSS (NM_001081422) -326 NM_001310601 665775 Mm.158726 NM_001081422 ENSMUSG00000061755 Bod1l A230054D04Rik|AI853319|FAM44A|mKIAA1327 biorientation of chromosomes in cell division 1-like protein-coding common_peak2_258_1970_0.278607699433396_11.0840159107602_9.14014913462754 chr7 126283638 126289403 + 9.14014913462754 NA intron (NM_145587, intron 1 of 3) intron (NM_145587, intron 1 of 3) 13901 NM_145587 104175 Mm.29660 NM_145587 ENSMUSG00000042978 Sbk1 Sbk SH3-binding kinase 1 protein-coding unique_peak1_12_10_2.46937731481728_4.69412027604594_9.1399368644091 chr11 98485726 98486106 + 9.1399368644091 NA intron (NM_011771, intron 5 of 7) intron (NM_011771, intron 5 of 7) 39082 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding unique_peak1_12_10_2.46937731481728_4.69412027604594_9.1399368644091-2 chr5 31703187 31703549 + 9.1399368644091 NA intron (NM_181281, intron 2 of 10) L1MC4a|LINE|L1 5318 NM_181282 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Bre 6030405P19Rik|AI429776|B830038C02Rik brain and reproductive organ-expressed protein protein-coding common_peak2_320_2628_0.242806508891011_11.4817016810636_9.13846426062455 chr11 103696788 103698784 + 9.13846426062455 NA promoter-TSS (NR_102388) promoter-TSS (NR_102388) 62 NR_102396 399609 Mm.351922 NR_102388 C130046K22Rik - RIKEN cDNA C130046K22 gene ncRNA common_peak2_483_4521_0.187046190256629_12.2362683718798_9.1361533096969 chr3 104779526 104785593 + 9.1361533096969 NA intron (NM_027982, intron 1 of 9) intron (NM_027982, intron 1 of 9) 1503 NM_027982 71887 Mm.379204 NM_027982 ENSMUSG00000002228 Ppm1j 2310008J22Rik|PP2Czeta|Ppp2cz protein phosphatase 1J protein-coding common_peak2_828_9081_0.133296079066358_13.2154423609575_9.13511941458908 chr1 132006512 132013823 + 9.13511941458908 NA intron (NM_007923, intron 1 of 4) intron (NM_007923, intron 1 of 4) 2562 NM_007923 13714 Mm.254233 NM_007923 ENSMUSG00000026436 Elk4 2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1 ELK4, member of ETS oncogene family protein-coding common_peak1_108_1107_-0.421999930519553_9.90274220078941_9.13470183184163 chr9 64252500 64253831 + 9.13470183184163 NA intron (NM_008927, intron 1 of 10) CpG 440 NM_008927 26395 Mm.248907 NM_008927 ENSMUSG00000004936 Map2k1 MAPKK1|MEKK1|Mek1|Prkmk1 mitogen-activated protein kinase kinase 1 protein-coding common_peak2_132_783_0.429190468547153_9.82930507838878_9.13394926114084 chr10 42961631 42963444 + 9.13394926114084 NA Intergenic Intergenic 102025 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak1_103_549_0.505358058601622_9.35596683771283_9.13391630380696 chrX 157597802 157598800 + 9.13391630380696 NA intron (NM_172307, intron 1 of 10) CpG 414 NM_172307 270669 Mm.37577 NM_172307 ENSMUSG00000046873 Mbtps2 9630032G22Rik|AI662535 membrane-bound transcription factor peptidase, site 2 protein-coding unique_peak2_34_355_-0.794287716442865_8.07858957274497_9.1331392950094 chr5 91985029 91986845 + 9.1331392950094 NA Intergenic ORR1C2|LTR|ERVL-MaLR -1536 NM_001177577 381651 Mm.332494 NM_001177577 ENSMUSG00000096035 Gm1045 Gm1045-a|Gm1045-b predicted gene 1045 protein-coding common_peak2_148_919_0.399434951163245_10.045207526526_9.1327760103937 chr9 113930946 113932607 + 9.1327760103937 NA intron (NM_013699, intron 2 of 15) GC_rich|Low_complexity|Low_complexity 842 NM_013699 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding common_peak1_148_919_0.399434951163245_10.045207526526_9.1327760103937 chr4 133277032 133278410 + 9.1327760103937 NA promoter-TSS (NM_025667) promoter-TSS (NM_025667) 69 NM_025667 52174 Mm.244748 NM_025667 ENSMUSG00000028857 Tmem222 5730406H10Rik|AA409341|D4Ertd196e transmembrane protein 222 protein-coding common_peak2_244_1827_0.288931468730935_10.9805160894235_9.13196069962441 chr11 52359835 52362105 + 9.13196069962441 NA 5' UTR (NM_011694, exon 1 of 9) 5' UTR (NM_011694, exon 1 of 9) 108 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding common_peak1_205_1442_0.323304610471899_10.6565078897271_9.131697487088 chr17 17373652 17375193 + 9.131697487088 NA promoter-TSS (NM_025934) promoter-TSS (NM_025934) 90 NM_025934 67045 Mm.35117 NM_025934 ENSMUSG00000023852 Riok2 2010110K24Rik|2410085M17Rik RIO kinase 2 (yeast) protein-coding common_peak2_231_1697_0.298879504518597_10.8790604958123_9.13029306068958 chr13 48869191 48872101 + 9.13029306068958 NA intron (NM_011078, intron 1 of 21) GC_rich|Low_complexity|Low_complexity 239 NM_011078 18676 Mm.486213 NM_011078 ENSMUSG00000038025 Phf2 GRC5 PHD finger protein 2 protein-coding common_peak2_55_558_-0.613527411638909_8.81994076702374_9.12932448038424-2 chr3 131056339 131058635 + 9.12932448038424 NA Intergenic ORR1B2|LTR|ERVL-MaLR -52810 NM_010703 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_55_558_-0.613527411638909_8.81994076702374_9.12932448038424 chr11 103953158 103954675 + 9.12932448038424 NA intron (NM_008740, intron 1 of 20) intron (NM_008740, intron 1 of 20) 140 NM_008740 18195 Mm.260117 NM_008740 ENSMUSG00000034187 Nsf AI316878|AU020090|AU067812|SKD2 N-ethylmaleimide sensitive fusion protein protein-coding common_peak1_26_280_-0.912218753381332_7.67831694353026_9.12772255751551 chr2 79264768 79265425 + 9.12772255751551 NA intron (NM_010576, intron 2 of 27) intron (NM_010576, intron 2 of 27) 9670 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_183_1950_-0.311700324956448_10.7741479001308_9.12746599355164 chr14 26668411 26670316 + 9.12746599355164 NA TTS (NR_106132) TTS (NR_106132) 245 NR_106132 102465773 NR_106132 ENSMUSG00000098751 Mir7672 Gm27314|mmu-mir-7672 microRNA 7672 ncRNA common_peak1_66_668_-0.555318700491737_9.10820305039559_9.12711125734852 chr3 84039461 84040181 + 9.12711125734852 NA intron (NM_172681, intron 1 of 34) CpG 340 NM_172681 229473 Mm.28838 NM_172681 ENSMUSG00000033767 D930015E06Rik Kiaa0922|mKIAA0922 RIKEN cDNA D930015E06 gene protein-coding common_peak1_232_1707_0.298019301253358_10.8871019102472_9.12635094022516 chr18 53861700 53863427 + 9.12635094022516 NA 5' UTR (NM_152809, exon 1 of 13) 5' UTR (NM_152809, exon 1 of 13) 450 NM_152809 70425 Mm.368668 NM_152809 ENSMUSG00000073563 Csnk1g3 3300002K07Rik|C330049O21Rik casein kinase 1, gamma 3 protein-coding common_peak1_208_2245_-0.289396595875859_10.9884439144627_9.12543131099338 chr9 40422259 40424878 + 9.12543131099338 NA intron (NM_172768, intron 1 of 19) intron (NM_172768, intron 1 of 19) 32196 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak2_96_979_-0.451299575639162_9.71098815118299_9.12515445736208 chr13 43484153 43486468 + 9.12515445736208 NA Intergenic MLT1F2|LTR|ERVL-MaLR -4337 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak1_308_2498_0.248547213843318_11.4114087930084_9.12340621538166 chr6 120835476 120837390 + 9.12340621538166 NA intron (NM_153516, intron 1 of 6) CpG 203 NM_153516 94044 Mm.27990 NM_153516 ENSMUSG00000009112 Bcl2l13 BCL-RAMBO|E430016C20Rik|Mil-1|Mil1 BCL2-like 13 (apoptosis facilitator) protein-coding common_peak1_13_162_-1.28877571539951_6.70434029653132_9.1230176837429-2 chr8 104435111 104435521 + 9.1230176837429 NA intron (NM_001013380, intron 4 of 12) MLT1J|LTR|ERVL-MaLR 7731 NM_001013380 234663 Mm.289583 NM_001013380 ENSMUSG00000035770 Dync1li2 AA409702|C920003I06|Dncli2|Dnclic2|LIC2 dynein, cytoplasmic 1 light intermediate chain 2 protein-coding common_peak1_13_162_-1.28877571539951_6.70434029653132_9.1230176837429 chr5 114783933 114784340 + 9.1230176837429 NA intron (NM_026718, intron 1 of 14) Tigger7|DNA|TcMar-Tigger 8996 NM_026718 68420 Mm.275554 NM_026718 ENSMUSG00000041870 Ankrd13a 1100001D10Rik|ANKRD13|AU046136 ankyrin repeat domain 13a protein-coding common_peak1_57_225_0.755096663283737_8.19772729405706_9.12027943073469 chr19 24166460 24167242 + 9.12027943073469 NA intron (NM_011597, intron 1 of 22) intron (NM_011597, intron 1 of 22) 7289 NM_001198985 21873 Mm.104744 NM_011597 ENSMUSG00000024812 Tjp2 ZO-2 tight junction protein 2 protein-coding common_peak2_430_3883_0.201228217729057_12.0239415942837_9.11903218231937 chr8 72318415 72327278 + 9.11903218231937 NA Intergenic Intergenic 3784 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak2_149_928_0.397227233093371_10.0581484029293_9.11410681193671 chr2 35446543 35450428 + 9.11410681193671 NA intron (NM_001308299, intron 1 of 7) intron (NM_001308299, intron 1 of 7) 12964 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak2_17_198_-1.13193925867098_7.07065499120816_9.11169655891475 chr5 99253032 99253805 + 9.11169655891475 NA promoter-TSS (NM_145839) promoter-TSS (NM_145839) -491 NM_145839 320292 Mm.259074 NM_145839 ENSMUSG00000089809 Rasgef1b 4732452O09Rik|GPIgamma4|Gpig4 RasGEF domain family, member 1B protein-coding common_peak1_21_234_-1.01671920387105_7.36815734462948_9.11135033975691 chr1 170276503 170277042 + 9.11135033975691 NA promoter-TSS (NM_012009) promoter-TSS (NM_012009) -552 NM_012009 26904 Mm.57009 NM_012009 ENSMUSG00000102418 Sh2d1b1 EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b SH2 domain containing 1B1 protein-coding common_peak2_216_1549_0.312165813838176_10.7541354070807_9.11068886565379 chr9 114400432 114402148 + 9.11068886565379 NA intron (NR_108101, intron 1 of 14) CpG 195 NM_001200002 100504715 Mm.290516 NM_001200002 ENSMUSG00000079260 Tmppe - transmembrane protein with metallophosphoesterase domain protein-coding common_peak1_31_327_-0.83468643030656_7.9402087894648_9.10787236478843 chr18 5989458 5989990 + 9.10787236478843 NA Intergenic Intergenic 146374 NM_029277 75415 Mm.239675 NM_029277 ENSMUSG00000041225 Arhgap12 2810011M08Rik Rho GTPase activating protein 12 protein-coding common_peak2_460_4243_0.192424913241618_12.1474213975356_9.10639801829499 chr7 127087699 127093056 + 9.10639801829499 NA Intergenic B3|SINE|B2 -1059 NM_178901 101602 Mm.490357 NM_178901 ENSMUSG00000045165 AI467606 - expressed sequence AI467606 protein-coding unique_peak2_7_108_-1.69854337283811_5.91891263835787_9.10239324958255 chr16 76337111 76337795 + 9.10239324958255 NA intron (NM_173440, intron 2 of 3) intron (NM_173440, intron 2 of 3) 35596 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak2_56_219_0.763139006025513_8.16292921653742_9.10099246339897 chr1 135429807 135431023 + 9.10099246339897 NA promoter-TSS (NM_153774) promoter-TSS (NM_153774) 76 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9|mKIAA1192 importin 9 protein-coding common_peak1_25_55_1.34806632258333_6.48138808334927_9.09826274503636 chr10 39377313 39377956 + 9.09826274503636 NA intron (NM_008054, intron 1 of 13) intron (NM_008054, intron 1 of 13) 7835 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_78_790_-0.505434793359475_9.37481648779305_9.09702854740095 chr16 55753490 55755846 + 9.09702854740095 NA Intergenic Intergenic 67470 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak1_44_450_-0.690804985690749_8.47158113041001_9.09273260314101 chr2 25428468 25429312 + 9.09273260314101 NA intron (NM_007379, intron 1 of 47) CpG 216 NM_007379 11305 Mm.2210 NM_007379 ENSMUSG00000026944 Abca2 AI413825|Abc2|D2H0S1474E|mKIAA1062 ATP-binding cassette, sub-family A (ABC1), member 2 protein-coding common_peak2_219_1579_0.308806797694162_10.7801122419115_9.09238533740277 chr8 22475915 22477893 + 9.09238533740277 NA promoter-TSS (NM_001012667) promoter-TSS (NM_001012667) -25 NM_001146117 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding unique_peak2_16_189_-1.16631934735678_6.98669593465256_9.09148426926657 chr8 117321062 117322300 + 9.09148426926657 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -27489 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_16_189_-1.16631934735678_6.98669593465256_9.09148426926657 chr2 25183614 25184050 + 9.09148426926657 NA TTS (NM_025980) TTS (NM_025980) 3074 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak2_409_3637_0.207231335478616_11.9325454953908_9.09116250124948 chr11 76492921 76497455 + 9.09116250124948 NA intron (NM_198018, intron 1 of 21) CpG 14231 NM_198018 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak1_242_1808_0.289499906524924_10.9657266458837_9.09077998488728 chr11 22850378 22854297 + 9.09077998488728 NA intron (NM_001169114, intron 1 of 1) RLTR51A_Mm|LTR|ERVK? 7398 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding unique_peak2_6_99_-1.81051606212951_5.73859815870997_9.08741952995359 chr2 181243746 181244614 + 9.08741952995359 NA Intergenic Intergenic -2153 NM_183162 229003 Mm.315872 NM_183162 ENSMUSG00000027580 Helz2 PDIP1|Pric285|mKIAA1769|mPDIP1 helicase with zinc finger 2, transcriptional coactivator protein-coding common_peak2_30_77_1.18127998587206_6.87604221179828_9.08593885717181 chr10 93225987 93226775 + 9.08593885717181 NA intron (NM_146239, intron 8 of 16) Lx3B|LINE|L1 63596 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak1_391_3428_0.213140981534117_11.8501426797027_9.08553068980016 chr5 65491417 65493978 + 9.08553068980016 NA intron (NM_133697, intron 1 of 4) CpG 138 NM_133697 68552 Mm.10709 NM_133697 ENSMUSG00000037822 Smim14 1110003E01Rik|1700127H04Rik|5430439C17Rik|MAd4 small integral membrane protein 14 protein-coding common_peak1_15_180_-1.20359262395804_6.89804957510419_9.084751106131 chr11 34049636 34049934 + 9.084751106131 NA intron (NM_010696, intron 1 of 20) intron (NM_010696, intron 1 of 20) 2584 NM_010696 16822 Mm.265350 NM_010696 ENSMUSG00000002699 Lcp2 AI323664|BB161688|SLP-76|SLP76|m1Khoe|twm lymphocyte cytosolic protein 2 protein-coding common_peak1_70_310_0.652388775716414_8.60696515798881_9.08327705938066 chr4 141663457 141664510 + 9.08327705938066 NA 5' UTR (NM_001033150, exon 1 of 20) 5' UTR (NM_001033150, exon 1 of 20) 132 NM_001033150 69582 Mm.33220 NM_001033150 ENSMUSG00000028917 Plekhm2 2310034J19Rik|AI854247|mKIAA0842 pleckstrin homology domain containing, family M (with RUN domain) member 2 protein-coding common_peak2_51_519_-0.640334257201166_8.70220068442787_9.08327134955474 chr10 24753494 24755207 + 9.08327134955474 NA Intergenic ID_B1|SINE|B4 -42191 NM_008813 18605 Mm.27254 NM_008813 ENSMUSG00000037370 Enpp1 4833416E15Rik|AI428932|C76301|CD203c|E-NPP 1|E-NPP1|Ly-41|M6S1|NPP1|Npps|PC-1|Pca|Pca-1|Pdnp1|ttw|twy ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding common_peak2_180_1208_0.349608786227238_10.4144029223627_9.08185112775425 chr1 16617852 16619915 + 9.08185112775425 NA intron (NR_073122, intron 1 of 4) CpG 455 NM_025773 66799 Mm.122430 NM_025773 ENSMUSG00000025939 Ube2w 6130401J04Rik ubiquitin-conjugating enzyme E2W (putative) protein-coding common_peak1_49_499_-0.653156781339346_8.63920589399241_9.08111268727425 chr10 128745977 128747048 + 9.08111268727425 NA Intergenic Intergenic -1367 NM_030100 78428 Mm.27358 NM_030100 ENSMUSG00000064030 Pym1 A030010B05Rik|Pym|Wibg PYM homolog 1, exon junction complex associated factor protein-coding unique_peak2_23_252_-0.969218106602216_7.4983845213932_9.08005151678209 chr5 125105707 125107052 + 9.08005151678209 NA intron (NM_001253904, intron 5 of 47) intron (NM_001253904, intron 5 of 47) 72835 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_71_718_-0.531937976193918_9.22387897234234_9.07877320362655 chr9 96739675 96741881 + 9.07877320362655 NA intron (NR_015511, intron 2 of 3) (CA)n|Simple_repeat|Simple_repeat -9103 NM_175537 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak1_32_336_-0.819284833520979_7.98696236442137_9.07701384087336 chr13 21811655 21812246 + 9.07701384087336 NA exon (NM_175657, exon 1 of 1).2 exon (NM_175657, exon 1 of 1).2 166 NM_175657 319161 Mm.261664 NM_175657 ENSMUSG00000069305 Hist1h4n - histone cluster 1, H4n protein-coding common_peak1_29_308_-0.862806595306671_7.84005973025104_9.07677065889737 chr6 127992060 127992666 + 9.07677065889737 NA intron (NM_175414, intron 3 of 8) intron (NM_175414, intron 3 of 8) 104741 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak2_277_2169_0.265117764647115_11.2160382096554_9.07388704287902 chr17 63498232 63501192 + 9.07388704287902 NA exon (NM_015794, exon 1 of 9) exon (NM_015794, exon 1 of 9) 868 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding common_peak2_144_886_0.403978607089826_9.99477959784598_9.07297046914906 chr16 57469316 57472902 + 9.07297046914906 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) -78133 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_116_652_0.466138784214714_9.58400857365379_9.07249605908684 chr1 75210254 75211485 + 9.07249605908684 NA promoter-TSS (NM_029010) promoter-TSS (NM_029010) 40 NM_011494 20872 Mm.1155 NM_011494 ENSMUSG00000026201 Stk16 EDPK|Krct|MPSK|PKL12|TSF-1 serine/threonine kinase 16 protein-coding common_peak1_46_470_-0.676452162186767_8.5413571685194_9.07146672943736 chr5 25529037 25529807 + 9.07146672943736 NA promoter-TSS (NR_027388) promoter-TSS (NR_027388) -596 NR_027388 73571 Mm.105263 NR_027388 ENSMUSG00000101856 1700096K18Rik - RIKEN cDNA 1700096K18 gene ncRNA common_peak2_36_374_-0.770963134171833_8.16526521829733_9.07066810510495 chr13 54071463 54072697 + 9.07066810510495 NA intron (NM_027324, intron 1 of 10) CpG 235 NM_027324 14057 Mm.134191 NM_027324 ENSMUSG00000021474 Sfxn1 2810002O05Rik|A930015P12Rik|f sideroflexin 1 protein-coding common_peak2_34_96_1.08153287233641_7.14067927835533_9.07012340500372 chr1 119912641 119913245 + 9.07012340500372 NA intron (NM_175106, intron 1 of 1) (CAAAAA)n|Simple_repeat|Simple_repeat 225 NM_175106 66343 Mm.49942 NM_175106 ENSMUSG00000036975 Tmem177 2300008B03Rik transmembrane protein 177 protein-coding common_peak1_34_96_1.08153287233641_7.14067927835533_9.07012340500372 chr15 36360520 36361193 + 9.07012340500372 NA Intergenic Intergenic -77709 NM_013923 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak1_92_936_-0.461088516771596_9.64136097927339_9.06980842714386 chr7 126694854 126696764 + 9.06980842714386 NA promoter-TSS (NM_029420) promoter-TSS (NM_029420) -26 NR_033446 75764 Mm.280573 NM_029420 ENSMUSG00000059772 Slx1b 1110030E23Rik|2410170E21Rik|4833422P03Rik|AI853643|Giyd1|Giyd2 SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) protein-coding common_peak2_61_251_0.716014592420746_8.33528721971029_9.06582830143968 chr3 95649988 95651919 + 9.06582830143968 NA Intergenic Intergenic -7768 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak2_77_780_-0.509622977347762_9.3543672494681_9.06420176187881 chr14 20792952 20795240 + 9.06420176187881 NA promoter-TSS (NM_001039138) promoter-TSS (NM_001039138) -8 NM_178597 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding common_peak1_98_999_-0.444329820847923_9.74361937423813_9.063031936555 chr11 101448024 101449340 + 9.063031936555 NA intron (NM_027320, intron 1 of 6) intron (NM_027320, intron 1 of 6) 270 NM_027320 70110 Mm.45558 NM_027320 ENSMUSG00000010358 Ifi35 2010008K16Rik|AW986054|IFP35|ifi-35 interferon-induced protein 35 protein-coding common_peak2_238_1768_0.29238618140212_10.9349114233915_9.05952260865238 chr4 133010964 133014066 + 9.05952260865238 NA intron (NM_146155, intron 2 of 6) CpG-10425 1009 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak2_256_1951_0.278864311593789_11.0701694933598_9.05731656044625 chr11 63973176 63978346 + 9.05731656044625 NA intron (NM_178379, intron 6 of 6) intron (NM_178379, intron 6 of 6) 11535 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak2_62_627_-0.573011588939845_9.00811495442171_9.0566107388239 chrX 8251730 8253294 + 9.0566107388239 NA promoter-TSS (NM_001290430) promoter-TSS (NM_001290430) -106 NM_001290430 54632 Mm.327529 NM_133991 ENSMUSG00000031171 Ftsj1 AI931847|Ftsj|Ftsjl|Sfc12 FtsJ RNA methyltransferase homolog 1 (E. coli) protein-coding unique_peak1_18_28_1.74238320826932_5.72917259926223_9.05331092906243-2 chr12 110510562 110510981 + 9.05331092906243 NA intron (NM_012023, intron 1 of 13) ORR1F|LTR|ERVL-MaLR 25032 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding unique_peak1_18_28_1.74238320826932_5.72917259926223_9.05331092906243 chr10 80627917 80628364 + 9.05331092906243 NA intron (NM_134002, intron 1 of 10) intron (NM_134002, intron 1 of 10) -1516 NM_001159591 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding common_peak1_18_28_1.74238320826932_5.72917259926223_9.05331092906243 chr9 66283246 66283614 + 9.05331092906243 NA Intergenic (CATG)n|Simple_repeat|Simple_repeat -67020 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding unique_peak1_18_28_1.74238320826932_5.72917259926223_9.05331092906243-3 chr9 62349007 62349343 + 9.05331092906243 NA intron (NM_009672, intron 1 of 6) intron (NM_009672, intron 1 of 6) 7832 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_19_215_-1.06375327453269_7.22301086489712_9.0532474882482 chr6 83832044 83832559 + 9.0532474882482 NA promoter-TSS (NM_146169) promoter-TSS (NM_146169) -560 NM_146169 232164 Mm.404420 NM_146169 ENSMUSG00000045896 Paip2b - poly(A) binding protein interacting protein 2B protein-coding common_peak2_109_1116_-0.417510140911043_9.91665840002779_9.05267502464082 chr13 90922692 90924243 + 9.05267502464082 NA intron (NM_024175, intron 1 of 3) CpG 345 NM_024175 66475 Mm.306302 NM_024175 ENSMUSG00000049517 Rps23 2410044J15Rik ribosomal protein S23 protein-coding common_peak2_33_345_-0.804479655476198_8.03238839989863_9.0513056465246 chr1 170907151 170908631 + 9.0513056465246 NA exon (NM_001029984, exon 5 of 6) exon (NM_001029984, exon 5 of 6) 5050 NM_001029984 435653 Mm.337931 NM_001029984 ENSMUSG00000070524 Fcrlb FREB-2|FREB2|FcRL2|Fcrlm2|Fcry|mFCRL2 Fc receptor-like B protein-coding common_peak2_103_550_0.502737358442486_9.3572771877924_9.05089906763567 chr10 39411555 39413949 + 9.05089906763567 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 42953 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_142_869_0.407318755846337_9.96853096865926_9.04872949039934 chr1 182488669 182491850 + 9.04872949039934 NA intron (NM_009794, intron 5 of 20) intron (NM_009794, intron 5 of 20) 27224 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_216_2338_-0.281457832352652_11.0509472301761_9.04737453075854 chr11 118264385 118267996 + 9.04737453075854 NA intron (NM_001033528, intron 15 of 20) intron (NM_001033528, intron 15 of 20) -17598 NM_011180 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_55_557_-0.610944250624906_8.81864918651673_9.04701602478849 chr3 60527280 60528147 + 9.04701602478849 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 26534 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_405_3592_0.20783851496223_11.9148924774833_9.04172915849743 chr4 150912338 150916700 + 9.04172915849743 NA Intergenic CpG -4598 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak1_84_852_-0.484760083465799_9.49402188958539_9.03955898106867 chr3 60412409 60413938 + 9.03955898106867 NA Intergenic Lx5c|LINE|L1 -59657 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_270_2096_0.269356387250815_11.168789339722_9.03910625892169 chr4 101355571 101358020 + 9.03910625892169 NA promoter-TSS (NR_040708) promoter-TSS (NR_040708) -547 NR_040708 77866 Mm.137053 NR_040708 ENSMUSG00000086782 E130102H24Rik - RIKEN cDNA E130102H24 gene ncRNA common_peak1_152_1592_-0.345725258244569_10.464667922403_9.03835205556889 chr12 85279434 85280628 + 9.03835205556889 NA exon (NM_025421, exon 2 of 3) exon (NM_025421, exon 2 of 3) 404 NM_025421 66204 Mm.311985 NM_025421 ENSMUSG00000008822 Acyp1 1110039O14Rik|AI325944 acylphosphatase 1, erythrocyte (common) type protein-coding common_peak1_54_547_-0.616741064574612_8.78966155067322_9.03750558261394 chr11 101063273 101064281 + 9.03750558261394 NA TTS (NM_016920) TTS (NM_016920) -6317 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding common_peak1_301_2425_0.250768861051398_11.3697482656462_9.03736014759165 chr1 55051837 55054160 + 9.03736014759165 NA intron (NM_026424, intron 1 of 3) CpG 228 NM_001039710 67876 Mm.281019 NM_026424 ENSMUSG00000025981 Coq10b 1500041J02Rik|1700030I21Rik|9530077A17Rik|AV002237|AW742641 coenzyme Q10B protein-coding common_peak1_25_271_-0.932041596609407_7.62144204294564_9.03703816096784 chr10 81545375 81545962 + 9.03703816096784 NA promoter-TSS (NM_010301) promoter-TSS (NM_010301) -622 NM_010301 14672 Mm.260925 NM_010301 ENSMUSG00000034781 Gna11 Dsk7|E430025L19 guanine nucleotide binding protein, alpha 11 protein-coding common_peak2_127_1312_-0.38256100420865_10.1673706987886_9.0370222684469 chr11 100573795 100576109 + 9.0370222684469 NA promoter-TSS (NM_001146318) promoter-TSS (NM_001146318) 13 NM_009923 12799 Mm.15711 NM_009923 ENSMUSG00000006782 Cnp CNPase|Cnp-1|Cnp1 2',3'-cyclic nucleotide 3' phosphodiesterase protein-coding common_peak1_81_820_-0.493182835526023_9.43464699401479_9.03632783859261 chr2 155818487 155819353 + 9.03632783859261 NA TTS (NM_010808) TTS (NM_010808) 283 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA common_peak1_30_317_-0.846200750550048_7.88978258000933_9.0357893544561 chr4 62638603 62639230 + 9.0357893544561 NA intron (NM_019492, intron 16 of 19) intron (NM_019492, intron 16 of 19) 19244 NM_134257 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_210_2266_-0.285969336601823_11.0035840074399_9.03528796606614 chr1 87827046 87830635 + 9.03528796606614 NA intron (NM_009118, intron 10 of 15) RLTR17B_Mm|LTR|ERVK -24447 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak1_184_1959_-0.30874870091284_10.7822635885462_9.03344813878139 chr5 33656935 33658777 + 9.03344813878139 NA promoter-TSS (NM_001040435) promoter-TSS (NM_001040435) -24 NM_026698 68366 Mm.491151 NM_026698 ENSMUSG00000019295 Tmem129 0610039G24Rik|2410015J15Rik|AA409575 transmembrane protein 129 protein-coding common_peak1_386_3372_0.214179599542391_11.8269064027893_9.03313940336736 chr4 139206476 139211126 + 9.03313940336736 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 14690 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_221_1600_0.305772886034795_10.7976440355337_9.03246492316437 chr7 66261081 66264920 + 9.03246492316437 NA intron (NM_146191, intron 31 of 33) intron (NM_146191, intron 31 of 33) 118724 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak1_22_43_1.47902918545621_6.1989462113654_9.03153895820383 chr1 166014341 166014903 + 9.03153895820383 NA Intergenic Intergenic -11988 NM_011137 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding unique_peak1_22_43_1.47902918545621_6.1989462113654_9.03153895820383-2 chr19 29485967 29486502 + 9.03153895820383 NA Intergenic Intergenic 35753 NR_015567 77779 Mm.458738 NR_015567 ENSMUSG00000097855 A930007I19Rik - RIKEN cDNA A930007I19 gene ncRNA common_peak2_53_537_-0.622642484530672_8.76014112029129_9.02959399143938 chr14 20388239 20389680 + 9.02959399143938 NA promoter-TSS (NM_134081) promoter-TSS (NM_134081) -49 NM_134081 108671 Mm.2871 NM_134081 ENSMUSG00000021811 Dnajc9 5330419I01Rik|AU020082 DnaJ heat shock protein family (Hsp40) member C9 protein-coding common_peak1_65_657_-0.558011514888005_9.08293801629124_9.02819882338001 chr2 3474225 3475624 + 9.02819882338001 NA promoter-TSS (NR_027509) promoter-TSS (NR_027509) 62 NM_022724 64707 Mm.23483 NM_022724 ENSMUSG00000026646 Suv39h2 4930507K23Rik|AA536750|D030054H19Rik|D2Ertd544e|KMT1B suppressor of variegation 3-9 homolog 2 (Drosophila) protein-coding common_peak2_75_758_-0.514367249645863_9.31077245059253_9.02713250135661 chr7 80339838 80341223 + 9.02713250135661 NA promoter-TSS (NM_133952) promoter-TSS (NM_133952) -311 NM_133952 101869 Mm.243024 NM_133952 ENSMUSG00000030533 Unc45a AW538196 unc-45 myosin chaperone A protein-coding common_peak1_40_411_-0.725057262117793_8.32397189612432_9.02445589416094 chr1 36719674 36720317 + 9.02445589416094 NA intron (NR_040290, intron 2 of 8) AT_rich|Low_complexity|Low_complexity 5457 NR_040290 71166 Mm.157049 NR_040290 ENSMUSG00000102416 4933424G06Rik 1700104I15Rik RIKEN cDNA 4933424G06 gene ncRNA common_peak2_128_751_0.435272834729595_9.77222526904244_9.02442726511264 chr3 18623292 18625832 + 9.02442726511264 NA Intergenic Intergenic -144085 NR_040544 73959 Mm.60616 NR_040544 ENSMUSG00000102699 4930433B08Rik - RIKEN cDNA 4930433B08 gene ncRNA common_peak2_72_728_-0.527455977941308_9.24604701535628_9.02094323947263 chr16 35918328 35919716 + 9.02094323947263 NA Intergenic Intergenic -19448 NM_030253 80285 Mm.49074 NM_030253 ENSMUSG00000022906 Parp9 ARTD9|AW214463|BC003281|Bagl|Bal|PARP-9 poly (ADP-ribose) polymerase family, member 9 protein-coding unique_peak2_12_152_-1.32857890923808_6.59309838807361_9.02090884290307 chr7 106204706 106206019 + 9.02090884290307 NA intron (NM_029000, intron 1 of 3).2 MMETn-int|LTR|ERVK 9975 NM_001243039 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak2_85_415_0.571899763299212_8.9863895997907_9.02022112719479 chr4 153974314 153975807 + 9.02022112719479 NA promoter-TSS (NM_177673) promoter-TSS (NM_177673) 21 NM_007859 13368 Mm.388918 NM_007859 ENSMUSG00000029027 Dffb 40kDa|5730477D02Rik|CAD|CPAN|DFF40|Didff DNA fragmentation factor, beta subunit protein-coding common_peak2_60_607_-0.583408062396613_8.95622348224528_9.01915256833505-2 chr7 38092830 38095345 + 9.01915256833505 NA Intergenic RSINE1|SINE|B4 13403 NM_007633 12447 Mm.16110 NM_007633 ENSMUSG00000002068 Ccne1 AW538188|CycE1 cyclin E1 protein-coding common_peak2_60_607_-0.583408062396613_8.95622348224528_9.01915256833505 chr11 62465881 62467752 + 9.01915256833505 NA intron (NM_001039536, intron 1 of 6) intron (NM_001039536, intron 1 of 6) 8356 NM_001039536 327942 Mm.390358 NM_199026 ENSMUSG00000014245 Pigl Gm737 phosphatidylinositol glycan anchor biosynthesis, class L protein-coding common_peak1_31_82_1.1478261429646_6.94895250282922_9.01570882763867 chr5 34194191 34194990 + 9.01570882763867 NA TTS (NM_001015039) TTS (NM_001015039) -6880 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding common_peak2_31_82_1.1478261429646_6.94895250282922_9.01570882763867 chr1 157411975 157412707 + 9.01570882763867 NA promoter-TSS (NR_027984) promoter-TSS (NR_027984) -11 NR_027984 69953 Mm.286863 NM_027274 ENSMUSG00000049881 2810025M15Rik AI429618 RIKEN cDNA 2810025M15 gene ncRNA common_peak2_104_558_0.498875757833629_9.37614235176001_9.01477459267005 chr15 78613030 78615936 + 9.01477459267005 NA intron (NM_028195, intron 8 of 12) MLT1K|LTR|ERVL-MaLR 17436 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak1_35_363_-0.776496967139673_8.11954615662886_9.01357421091956-2 chr11 78599090 78599787 + 9.01357421091956 NA intron (NM_008702, intron 3 of 10) intron (NM_008702, intron 3 of 10) -48703 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e transmembrane protein 97 protein-coding common_peak1_35_363_-0.776496967139673_8.11954615662886_9.01357421091956 chr11 53762629 53763163 + 9.01357421091956 NA TTS (NR_106131) TTS (NR_106131) 758 NR_106131 102465772 NR_106131 ENSMUSG00000099153 Mir7671 Gm27802|mmu-mir-7671 microRNA 7671 ncRNA common_peak1_115_1181_-0.40512638329225_10.0044511285314_9.01337111382503 chr8 117073885 117075782 + 9.01337111382503 NA intron (NM_029686, intron 4 of 42) intron (NM_029686, intron 4 of 42) 7616 NM_029686 76645 Mm.159753 NM_029686 ENSMUSG00000034416 Pkd1l2 1700126L06Rik polycystic kidney disease 1 like 2 protein-coding common_peak2_154_1614_-0.342530657968661_10.486053120597_9.01312525120445 chr15 102202359 102204783 + 9.01312525120445 NA promoter-TSS (NM_001289695) promoter-TSS (NM_001289695) -74 NM_001289694 68744 Mm.352945 NM_153194 ENSMUSG00000046897 Zfp740 1110034O07Rik|AW548228|Znf740 zinc finger protein 740 protein-coding common_peak1_28_298_-0.875338359685537_7.78633249435534_9.01275760470091 chr6 38352393 38353065 + 9.01275760470091 NA intron (NM_028864, intron 1 of 8) intron (NM_028864, intron 1 of 8) 1874 NM_028864 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding common_peak1_26_279_-0.907075450105372_7.67574529189228_9.01226170897275 chr11 106751850 106752406 + 9.01226170897275 NA intron (NR_073165, intron 2 of 9) intron (NR_073165, intron 2 of 9) 902 NM_001033435 380732 Mm.343952 NM_001033435 ENSMUSG00000040528 Milr1 Allergin-1|Gm885|Mca32 mast cell immunoglobulin like receptor 1 protein-coding common_peak2_68_687_-0.543669434455303_9.15443003747445_9.01199440361098 chr6 144669800 144672236 + 9.01199440361098 NA Intergenic Intergenic -1850 NR_040519 66760 Mm.233631 NR_040519 ENSMUSG00000085785 Sox5os3 4933425H06Rik SRY (sex determining region Y)-box 5, opposite strand 3 ncRNA common_peak1_85_861_-0.479204577648794_9.5119417702647_9.01005524777325 chr17 13143921 13145038 + 9.01005524777325 NA Intergenic RMER10A|LTR|ERVL -12688 NM_199252 381058 Mm.390935 NM_199252 ENSMUSG00000067049 Unc93a Unc93l|unc-93A unc-93 homolog A (C. elegans) protein-coding unique_peak2_18_206_-1.09312275410243_7.14692558044811_9.00950786552326 chr13 52025736 52027319 + 9.00950786552326 NA Intergenic Intergenic -70214 NR_045061 74050 Mm.84860 NR_045061 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA common_peak2_80_380_0.592694895499557_8.8699946352431_9.00823340321358 chr17 83989861 83991495 + 9.00823340321358 NA Intergenic Intergenic -7874 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak1_47_166_0.8566834868044_7.81204603587625_9.00804811542579 chr1 153708656 153709610 + 9.00804811542579 NA Intergenic B1F|SINE|Alu 28696 NR_046171 329271 Mm.384841 NR_046171 ENSMUSG00000100334 C230024C17Rik C230024C17 RIKEN cDNA C230024C17 gene ncRNA common_peak2_98_512_0.518639448207111_9.26213473971061_9.00738134741431 chr6 140423494 140425270 + 9.00738134741431 NA exon (NM_144920, exon 2 of 31) exon (NM_144920, exon 2 of 31) 283 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak2_42_430_-0.705816888835148_8.39863561467152_9.00724708365522 chr12 85623660 85625638 + 9.00724708365522 NA intron (NM_001205052, intron 2 of 3) ID_B1|SINE|B4 24631 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak1_71_717_-0.529930049577672_9.22287500903422_9.00631884457994 chr1 58444869 58446088 + 9.00631884457994 NA promoter-TSS (NM_027351) promoter-TSS (NM_027351) 8 NM_027374 70225 Mm.340195 NM_027351 ENSMUSG00000026035 Ppil3 2310076N22Rik|2510026K04Rik|Cyp10l peptidylprolyl isomerase (cyclophilin)-like 3 protein-coding common_peak1_51_190_0.804604727791539_7.97973119193152_9.00565744021757 chr8 120682488 120683581 + 9.00565744021757 NA Intergenic Intergenic 14714 NM_001293559 12857 Mm.386758 NM_009941 ENSMUSG00000031818 Cox4i1 AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1 cytochrome c oxidase subunit IV isoform 1 protein-coding common_peak1_123_1268_-0.389569526734087_10.1146915904741_9.00527732998582 chr13 113087955 113089076 + 9.00527732998582 NA intron (NM_001281487, intron 11 of 11) intron (NM_001281487, intron 11 of 11) 12466 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak2_48_172_0.84224800927396_7.85575223227371_9.00183343130039 chr11 95823793 95825138 + 9.00183343130039 NA promoter-TSS (NM_153104) promoter-TSS (NM_153104) -35 NM_153104 237928 Mm.133075 NM_153104 ENSMUSG00000050860 Phospho1 D11Moh36|Phospo1 phosphatase, orphan 1 protein-coding common_peak1_98_998_-0.442886403978253_9.74289766580329_9.00157772980473 chr11 48816601 48817519 + 9.00157772980473 NA 5' UTR (NM_145377, exon 1 of 6) 5' UTR (NM_145377, exon 1 of 6) 331 NM_145377 211007 Mm.794 NM_145377 ENSMUSG00000040365 Trim41 AW552703|BC020156|R75223|RINCK tripartite motif-containing 41 protein-coding common_peak1_80_810_-0.497216021224395_9.41495009360507_9.00151381887438 chr9 44129674 44130880 + 9.00151381887438 NA Intergenic CpG -4381 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding common_peak1_41_421_-0.717012233722331_8.36259307184602_9.00120965693341 chr7 19308190 19309174 + 9.00120965693341 NA intron (NM_008036, intron 1 of 3) CpG 1363 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding common_peak2_227_2470_-0.273155953405897_11.1343013186258_9.00099646948373 chr11 106778437 106781628 + 9.00099646948373 NA promoter-TSS (NR_027785) promoter-TSS (NR_027785) -495 NM_015810 50776 Mm.859 NM_015810 ENSMUSG00000020718 Polg2 - polymerase (DNA directed), gamma 2, accessory subunit protein-coding common_peak2_63_636_-0.56567167675842_9.03231372387709_8.99998662495172 chr8 116551841 116553663 + 8.99998662495172 NA Intergenic Intergenic 47737 NM_029297 75465 Mm.23114 NM_029297 ENSMUSG00000034467 Dynlrb2 1700009A04Rik|DNLC2B|Dncl2b dynein light chain roadblock-type 2 protein-coding common_peak1_102_1041_-0.433591678501768_9.80834372302762_8.99995858896139 chr7 132804841 132806493 + 8.99995858896139 NA intron (NM_212473, intron 1 of 4) intron (NM_212473, intron 1 of 4) 7529 NM_212473 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_49_178_0.828811726058484_7.8982216402935_8.99958087189331 chr16 92644219 92644810 + 8.99958087189331 NA intron (NM_001111023, intron 3 of 5) intron (NM_001111023, intron 3 of 5) 52815 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_47_478_-0.663494066457728_8.57213481250731_8.99926786864698 chr16 64799609 64802150 + 8.99926786864698 NA Intergenic Intergenic -14558 NM_028059 72020 Mm.25960 NM_028059 ENSMUSG00000047141 Zfp654 1600021C16Rik|1810008K20Rik|433036|Gm5488|Znf654 zinc finger protein 654 protein-coding common_peak1_49_498_-0.650268502014519_8.63776175433_8.99437376371085 chr7 142353139 142354021 + 8.99437376371085 NA intron (NM_177265, intron 2 of 3) intron (NM_177265, intron 2 of 3) 18679 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak2_164_1727_-0.329461967624267_10.5901565183513_8.99331013549832 chr7 73606532 73609562 + 8.99331013549832 NA Intergenic Intergenic -49652 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_45_155_0.879670896417617_7.72523766707106_8.99316260589618-2 chr8 69121197 69122030 + 8.99316260589618 NA Intergenic Intergenic 19340 NM_199364 211134 Mm.409446 NM_199364 ENSMUSG00000036306 Lzts1 F37|FEZ1|PSD-Zip70 leucine zipper, putative tumor suppressor 1 protein-coding common_peak1_45_155_0.879670896417617_7.72523766707106_8.99316260589618 chr3 79103534 79104512 + 8.99316260589618 NA exon (NM_001099624, exon 3 of 24) exon (NM_001099624, exon 3 of 24) 40864 NM_001310536 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak1_57_576_-0.597151882946557_8.8738515671722_8.98977757783553 chrX 162760369 162761173 + 8.98977757783553 NA intron (NM_009031, intron 1 of 11) CpG 399 NM_009031 245688 Mm.270186 NM_009031 ENSMUSG00000031353 Rbbp7 AA409861|AI173248|AU019541|BB114024|mRbAp46 retinoblastoma binding protein 7 protein-coding common_peak1_21_39_1.53786964780659_6.09086291879066_8.98791253154186 chr3 59259438 59259902 + 8.98791253154186 NA exon (NM_177855, exon 31 of 44) exon (NM_177855, exon 31 of 44) 3161 NM_027571 70839 Mm.422675 NM_027571 ENSMUSG00000036353 P2ry12 2900079B22Rik|4921504D23Rik|P2Y12 purinergic receptor P2Y, G-protein coupled 12 protein-coding common_peak1_89_445_0.551891048830683_9.07684542433565_8.98458354754872 chr9 107312339 107313699 + 8.98458354754872 NA Intergenic Intergenic 16330 NM_009895 12700 Mm.4592 NM_009895 ENSMUSG00000032578 Cish CIS-1|CIS1|Cis|F17|F23|SOCS cytokine inducible SH2-containing protein protein-coding common_peak2_174_1842_-0.31828905422886_10.6886958285163_8.98448207724613 chr7 81570625 81573047 + 8.98448207724613 NA exon (NM_001004185, exon 1 of 10) exon (NM_001004185, exon 1 of 10) 544 NM_001004185 434204 Mm.181641 NM_001004185 ENSMUSG00000045795 Whamm BB081391|Whdc1|mKIAA1971 WAS protein homolog associated with actin, golgi membranes and microtubules protein-coding common_peak2_179_1200_0.349382824231709_10.4047118478215_8.98427614514426 chr11 11707383 11713129 + 8.98427614514426 NA intron (NM_001301866, intron 3 of 5) L3b|LINE|CR1 20079 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_350_2964_0.227396092481063_11.6475144356739_8.9840716616565 chr8 123372807 123375501 + 8.9840716616565 NA intron (NM_001286363, intron 1 of 16) CpG 443 NM_001286363 66855 Mm.178818 NM_025804 ENSMUSG00000001472 Tcf25 1100001J13Rik|1810041K11Rik|D8Ertd325e|Nulp1|mKIAA1049 transcription factor 25 (basic helix-loop-helix) protein-coding common_peak2_233_1720_0.294658894907297_10.8963608294939_8.98167833065168 chr15 79345446 79349273 + 8.98167833065168 NA promoter-TSS (NM_010755) promoter-TSS (NM_010755) -161 NM_010755 17133 Mm.86646 NM_010755 ENSMUSG00000042622 Maff - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) protein-coding common_peak1_130_1344_-0.376303195597114_10.2052388596454_8.98058564211888 chr7 80582588 80583945 + 8.98058564211888 NA Intergenic Intergenic -48147 NM_001042527 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding common_peak2_197_1369_0.328106597152631_10.5840134764242_8.98041703493681 chr10 94687684 94689641 + 8.98041703493681 NA promoter-TSS (NM_029852) promoter-TSS (NM_029852) -49 NR_015524 67723 Mm.116284 NR_015524 ENSMUSG00000097164 Cep83os 4932415G12Rik|Ccdc41os1 centrosomal protein 83, opposite strand ncRNA common_peak2_46_161_0.863281084541393_7.77149054515532_8.97920051814291 chr12 21543011 21543924 + 8.97920051814291 NA Intergenic CpG -126031 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_66_666_-0.550999251034861_9.10604332566716_8.97678552242858 chr5 146230873 146232028 + 8.97678552242858 NA promoter-TSS (NM_153599) promoter-TSS (NM_153599) -225 NM_153599 264064 Mm.260576 NM_153599 ENSMUSG00000029635 Cdk8 - cyclin-dependent kinase 8 protein-coding common_peak1_56_566_-0.602706205392055_8.8458518222462_8.9766991034665 chr8 95887740 95888661 + 8.9766991034665 NA intron (NM_010325, intron 1 of 9) CpG 165 NM_010325 14719 Mm.230169 NM_010325 ENSMUSG00000031672 Got2 AL022787|FABP-pm|Got-2|Kyat4|mAspAT glutamatic-oxaloacetic transaminase 2, mitochondrial protein-coding unique_peak2_17_197_-1.12467125820694_7.06702099097614_8.9752455272855 chr13 23517224 23518185 + 8.9752455272855 NA Intergenic tRNA-Met-i|tRNA|tRNA -13340 NM_153173 69386 Mm.158272 NM_153173 ENSMUSG00000060981 Hist1h4h 1700024H08Rik histone cluster 1, H4h protein-coding common_peak1_17_197_-1.12467125820694_7.06702099097614_8.9752455272855-3 chrX 12080755 12081170 + 8.9752455272855 NA promoter-TSS (NM_029510) promoter-TSS (NM_029510) -409 NM_029510 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_17_197_-1.12467125820694_7.06702099097614_8.9752455272855-2 chr7 126287062 126287532 + 8.9752455272855 NA intron (NM_145587, intron 1 of 3) intron (NM_145587, intron 1 of 3) 14678 NM_145587 104175 Mm.29660 NM_145587 ENSMUSG00000042978 Sbk1 Sbk SH3-binding kinase 1 protein-coding common_peak1_17_197_-1.12467125820694_7.06702099097614_8.9752455272855 chr11 106479222 106479648 + 8.9752455272855 NA intron (NM_023913, intron 1 of 21) B1_Mus2|SINE|Alu 8361 NM_023913 78943 Mm.340943 NM_023913 ENSMUSG00000020715 Ern1 9030414B18Rik|AI225830|C85377|Ire1a|Ire1alpha|Ire1p endoplasmic reticulum (ER) to nucleus signalling 1 protein-coding common_peak2_146_1523_-0.352636434429353_10.3973289702786_8.97309960534417 chr4 136309935 136312072 + 8.97309960534417 NA promoter-TSS (NM_028871) promoter-TSS (NM_028871) 61 NM_001277123 74326 Mm.31051 NM_028871 ENSMUSG00000066037 Hnrnpr 2610003J05Rik|2610528B01Rik|Hnrpr heterogeneous nuclear ribonucleoprotein R protein-coding common_peak2_369_3179_0.219690499104368_11.7446562997239_8.9730969785718 chr19 6045298 6048001 + 8.9730969785718 NA promoter-TSS (NM_028769) promoter-TSS (NM_028769) 73 NM_028769 74126 Mm.149870 NM_028769 ENSMUSG00000024807 Syvn1 1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1 synovial apoptosis inhibitor 1, synoviolin protein-coding common_peak1_32_335_-0.81499747511788_7.98481868521982_8.97168979171057 chr17 45506811 45507138 + 8.97168979171057 NA exon (NM_198608, exon 1 of 22) exon (NM_198608, exon 1 of 22) 133 NM_198608 224805 Mm.329063 NM_198608 ENSMUSG00000023938 Aars2 Aarsl|AlaRS|Gm89 alanyl-tRNA synthetase 2, mitochondrial protein-coding common_peak1_32_335_-0.81499747511788_7.98481868521982_8.97168979171057-2 chr2 101812243 101813027 + 8.97168979171057 NA intron (NM_001110849, intron 2 of 9) MIR|SINE|MIR -14928 NM_001083810 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak2_66_284_0.675725591097619_8.49268090460091_8.97155086991495 chr10 53378972 53380123 + 8.97155086991495 NA exon (NM_001204983, exon 1 of 13) exon (NM_001204983, exon 1 of 13) 304 NM_001204983 100038725 Mm.441403 NM_001204983 ENSMUSG00000038594 Cep85l ENSMUSG00000038594|Gm9766 centrosomal protein 85-like protein-coding common_peak1_76_352_0.613197167501886_8.77012295702212_8.96998387313861 chr13 77708477 77709307 + 8.96998387313861 NA intron (NM_001163419, intron 1 of 9) CpG 202 NM_001163419 68675 Mm.343005 NM_138312 ENSMUSG00000064138 Fam172a 1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|AF064782|pEN87 family with sequence similarity 172, member A protein-coding common_peak1_256_1953_0.277386897188292_11.0709082005625_8.96936865456883 chr12 69183212 69185038 + 8.96936865456883 NA promoter-TSS (NM_025589) promoter-TSS (NM_025589) -33 NM_146035 217664 Mm.206642 NM_146035 ENSMUSG00000043998 Mgat2 AA407964|CDGS2|GLCNACTII|GNT-II|GNT2 mannoside acetylglucosaminyltransferase 2 protein-coding common_peak1_181_1923_-0.310935729863639_10.7544252188382_8.96752270994029 chr17 23803151 23804936 + 8.96752270994029 NA intron (NM_175229, intron 1 of 13) intron (NM_175229, intron 1 of 13) 856 NM_175229 75956 Mm.5222 NM_175229 ENSMUSG00000039218 Srrm2 5033413A03Rik|AA410130|SRm300|mKIAA0324 serine/arginine repetitive matrix 2 protein-coding common_peak2_199_1388_0.326021241714061_10.6028415048384_8.96711883204045 chr2 153740655 153742525 + 8.96711883204045 NA intron (NM_007896, intron 1 of 6) CpG 303 NM_007896 13589 Mm.143877 NM_007896 ENSMUSG00000027479 Mapre1 5530600P05Rik|AI462499|AI504412|AW260097|BIM1p|D2Ertd459e|Eb1 microtubule-associated protein, RP/EB family, member 1 protein-coding unique_peak2_29_307_-0.858130108097199_7.8377214866463_8.9668690310513-2 chr8 119786097 119788160 + 8.9668690310513 NA Intergenic Intergenic -8712 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding unique_peak2_29_307_-0.858130108097199_7.8377214866463_8.9668690310513 chr11 100440371 100441602 + 8.9668690310513 NA promoter-TSS (NM_025727) promoter-TSS (NM_025727) 103 NM_026561 68106 Mm.28738 NM_026561 ENSMUSG00000017176 Nt5c3b 2610037D24Rik|AI841843|C330027I04Rik|Nt5c3l 5'-nucleotidase, cytosolic IIIB protein-coding common_peak1_93_475_0.534925635304432_9.16228058096016_8.96660907794636 chr19 12798514 12799566 + 8.96660907794636 NA intron (NM_134152, intron 1 of 8) A-rich|Low_complexity|Low_complexity 431 NM_134152 107321 Mm.313136 NM_134152 ENSMUSG00000024696 Lpxn 4933402K05Rik|A530083L21Rik|AV278559|LDPL leupaxin protein-coding common_peak2_154_1613_-0.341637071665154_10.4856063274452_8.96484828348038 chr13 63814358 63816178 + 8.96484828348038 NA promoter-TSS (NM_023507) promoter-TSS (NM_023507) -52 NM_001013608 76251 Mm.186610 NM_023507 ENSMUSG00000021470 Ercc6l2 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278 excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 protein-coding unique_peak1_17_25_1.80424564373158_5.60256254000688_8.9646496603837-2 chr8 83777008 83777495 + 8.9646496603837 NA Intergenic Intergenic -35940 NM_001163031 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding unique_peak1_17_25_1.80424564373158_5.60256254000688_8.9646496603837 chr7 25129678 25130193 + 8.9646496603837 NA intron (NM_011138, intron 1 of 13) intron (NM_011138, intron 1 of 13) 2525 NM_011138 18987 Mm.76683 NM_011138 ENSMUSG00000008496 Pou2f2 Oct-2|Oct2a|Oct2b|Oct2c|Oct2d|Otf-2|Otf2 POU domain, class 2, transcription factor 2 protein-coding unique_peak1_13_13_2.25259751677397_4.93365368044459_8.96450605037124-4 chr4 145252622 145252978 + 8.96450605037124 NA Intergenic Intergenic -5930 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak1_13_13_2.25259751677397_4.93365368044459_8.96450605037124-3 chr16 93786215 93786563 + 8.96450605037124 NA intron (NM_027293, intron 26 of 36) RMER5|LTR|ERV1 -45732 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak1_13_13_2.25259751677397_4.93365368044459_8.96450605037124 chr13 30914653 30915048 + 8.96450605037124 NA intron (NM_025588, intron 6 of 27) intron (NM_025588, intron 6 of 27) 32911 NM_153072 210554 Mm.450571 NM_153072 ENSMUSG00000076430 Hus1b - HUS1 checkpoint clamp component B protein-coding unique_peak1_13_13_2.25259751677397_4.93365368044459_8.96450605037124 chr1 61638687 61639022 + 8.96450605037124 NA promoter-TSS (NM_001081050) promoter-TSS (NM_001081050) 30 NM_001081050 72823 Mm.35153 NM_001081050 ENSMUSG00000052062 Pard3b 1810008K04Rik|2010002N16Rik|2810455B10Rik|Als2cr19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding unique_peak1_13_13_2.25259751677397_4.93365368044459_8.96450605037124-2 chr11 96825322 96825733 + 8.96450605037124 NA intron (NM_001130450, intron 2 of 4) intron (NM_001130450, intron 2 of 4) -1400 NM_001130451 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak1_242_2651_-0.262388460966424_11.2416708296294_8.95945816133199 chr3 107333220 107334950 + 8.95945816133199 NA promoter-TSS (NM_001045807) promoter-TSS (NM_001045807) -796 NM_001045807 229700 Mm.27966 NM_001045807 ENSMUSG00000048109 Rbm15 C230088J01Rik|mKIAA1438 RNA binding motif protein 15 protein-coding common_peak2_108_1104_-0.418088418749157_9.90078644490421_8.9592943808269 chr7 58397711 58400187 + 8.9592943808269 NA Intergenic Intergenic -259253 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_384_3351_0.214020693952035_11.8178167806754_8.95914438635509 chr9 13826142 13828657 + 8.95914438635509 NA promoter-TSS (NM_026665) promoter-TSS (NM_026665) -292 NM_026665 74360 Mm.157212 NM_026665 ENSMUSG00000031922 Cep57 3110002L15Rik|4921510P06Rik|4931428M20Rik|AI467480|Tsp57|mKIAA0092 centrosomal protein 57 protein-coding common_peak1_78_788_-0.501782398900142_9.37299029056339_8.95890482207087 chr1 86264127 86265682 + 8.95890482207087 NA intron (NM_001310702, intron 23 of 24) PB1D10|SINE|Alu -38317 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak1_23_251_-0.963504455407822_7.49552769579601_8.9588383539325-2 chr8 86623367 86623887 + 8.9588383539325 NA promoter-TSS (NM_025827) promoter-TSS (NM_025827) -416 NM_025827 66887 Mm.324550 NM_025827 ENSMUSG00000047866 Lonp2 1300002A08Rik|AU015403|Lonp lon peptidase 2, peroxisomal protein-coding common_peak1_23_251_-0.963504455407822_7.49552769579601_8.9588383539325 chr1 40518430 40518972 + 8.9588383539325 NA intron (NM_010553, intron 3 of 12) intron (NM_010553, intron 3 of 12) 3339 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_36_107_1.02489614904794_7.26733557668744_8.95777745107503 chr10 78464339 78465036 + 8.95777745107503 NA intron (NM_172134, intron 1 of 10) CpG 261 NM_172134 216134 Mm.206159 NM_172134 ENSMUSG00000032788 Pdxk 2310036D04Rik|AA119688|C77999 pyridoxal (pyridoxine, vitamin B6) kinase protein-coding common_peak2_110_606_0.478365461109014_9.48473543681019_8.95479411491089 chr2 130449767 130451194 + 8.95479411491089 NA 5' UTR (NM_001163688, exon 1 of 21) 5' UTR (NM_001163688, exon 1 of 21) 202 NM_001163688 19262 Mm.224246 NM_008980 ENSMUSG00000027303 Ptpra Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha protein tyrosine phosphatase, receptor type, A protein-coding common_peak1_27_288_-0.888360932482753_7.7307452162593_8.95278315753496 chr11 52318066 52318568 + 8.95278315753496 NA Intergenic Intergenic -35303 NM_001313981 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding unique_peak2_27_288_-0.888360932482753_7.7307452162593_8.95278315753496 chr17 34209968 34211672 + 8.95278315753496 NA intron (NM_011530, intron 5 of 11) intron (NM_011530, intron 5 of 11) 6341 NM_011530 21355 Mm.14814 NM_011530 ENSMUSG00000024339 Tap2 ABC18|AI462429|APT2|Abcb3|Ham-2|Ham2|MTP2|PSF2|RING11|Tap-2|Y1|jas transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) protein-coding common_peak2_382_3328_0.214737141788156_11.8082417260343_8.95218198868326 chr6 113694400 113698665 + 8.95218198868326 NA promoter-TSS (NM_001033463) promoter-TSS (NM_001033463) -967 NM_001033463 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak1_131_777_0.426918225047398_9.81708545750989_8.95188876108328 chr6 97320739 97322440 + 8.95188876108328 NA intron (NM_145148, intron 12 of 23) intron (NM_145148, intron 12 of 23) -68809 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_141_1466_-0.358881298640016_10.3392125063534_8.94936697184592 chr4 123572426 123573838 + 8.94936697184592 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -43288 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak1_29_73_1.19920306696875_6.80905489911333_8.94787988072141 chr5 114897313 114897870 + 8.94787988072141 NA 5' UTR (NM_011854, exon 1 of 6) 5' UTR (NM_011854, exon 1 of 6) 657 NM_011854 23962 Mm.228363 NM_011854 ENSMUSG00000029561 Oasl2 M1204|Mmu-OASL|Oasl 2'-5' oligoadenylate synthetase-like 2 protein-coding common_peak1_29_73_1.19920306696875_6.80905489911333_8.94787988072141-2 chr8 73353055 73353553 + 8.94787988072141 NA promoter-TSS (NM_010687) promoter-TSS (NM_010687) -748 NM_010687 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large1 BPFD#36|Gyltl1a|Large|Mbp-1|Mbp1|enr|fg|froggy|myd LARGE xylosyl- and glucuronyltransferase 1 protein-coding common_peak1_33_344_-0.800303979505005_8.03030056191303_8.94748625812561 chr15 44618486 44618990 + 8.94748625812561 NA promoter-TSS (NM_019480) promoter-TSS (NM_019480) -903 NM_019480 55960 Mm.287896 NM_019480 ENSMUSG00000022339 Ebag9 AI835379|Rcas1 estrogen receptor-binding fragment-associated gene 9 protein-coding common_peak1_178_1888_-0.313862400965601_10.7264757859056_8.94667653230491 chr15 36607412 36609062 + 8.94667653230491 NA intron (NM_008774, intron 1 of 14) CpG 736 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak2_61_252_0.710300941226352_8.33814404530749_8.94424798145628 chr5 146962707 146964032 + 8.94424798145628 NA 5' UTR (NM_001256101, exon 2 of 5) 5' UTR (NM_001256101, exon 2 of 5) 428 NM_001256101 76366 Mm.486234 NM_029581 ENSMUSG00000016510 Mtif3 2810012L14Rik|AI414549 mitochondrial translational initiation factor 3 protein-coding common_peak1_85_860_-0.477529945956539_9.51110445441858_8.94409572246819 chr6 121245038 121246266 + 8.94409572246819 NA promoter-TSS (NM_011909) promoter-TSS (NM_011909) -254 NM_011909 24110 Mm.326911 NM_011909 ENSMUSG00000030107 Usp18 1110058H21Rik|AW047653|UBP43|Ubp15 ubiquitin specific peptidase 18 protein-coding common_peak1_155_984_0.382188157636834_10.1350739931622_8.94328959004185 chr13 51100184 51101869 + 8.94328959004185 NA promoter-TSS (NM_001283029) promoter-TSS (NM_001283029) 146 NM_146043 20729 Mm.188432 NM_011462 ENSMUSG00000021395 Spin1 Spin spindlin 1 protein-coding common_peak1_37_112_1.00679755216806_7.32357773849922_8.94278895680799 chr7 80033122 80033681 + 8.94278895680799 NA intron (NM_175433, intron 1 of 4) URR1A|DNA|hAT-Charlie 7173 NM_175433 209225 Mm.290925 NM_175433 ENSMUSG00000048897 Zfp710 5430400N05Rik|9830165K13|AI324798|Znf710 zinc finger protein 710 protein-coding common_peak2_37_112_1.00679755216806_7.32357773849922_8.94278895680799 chr1 134405523 134406450 + 8.94278895680799 NA promoter-TSS (NM_028057) promoter-TSS (NM_028057) -4 NM_028057 72017 Mm.280230 NM_028057 ENSMUSG00000026456 Cyb5r1 1500005G05Rik|B5R.1|C80155|Nqo3a2 cytochrome b5 reductase 1 protein-coding common_peak2_111_1136_-0.411227166501611_9.94540295564144_8.94168518266559 chr8 122610783 122612666 + 8.94168518266559 NA promoter-TSS (NM_021502) promoter-TSS (NM_021502) 98 NM_021502 59005 Mm.38746 NM_021502 ENSMUSG00000015013 Trappc2l 1810017G16Rik|AB030200|Hspc176|Tca17 trafficking protein particle complex 2-like protein-coding common_peak1_98_997_-0.441441541523096_9.74217523457571_8.94030808522369 chr17 56608931 56610312 + 8.94030808522369 NA intron (NM_153152, intron 1 of 3) CpG 150 NM_153152 224904 Mm.34002 NM_153152 ENSMUSG00000049760 2410015M20Rik Mic13|QIL1|sr104 RIKEN cDNA 2410015M20 gene protein-coding common_peak1_52_526_-0.625917386194102_8.72870045854016_8.93922338576999 chr16 49886763 49887733 + 8.93922338576999 NA intron (NM_010581, intron 4 of 9) MTD|LTR|ERVL-MaLR 31594 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_87_881_-0.471612480490858_9.54882860531209_8.93090822785936 chr11 101315997 101316891 + 8.93090822785936 NA 5' UTR (NM_011192, exon 1 of 11) 5' UTR (NM_011192, exon 1 of 11) 193 NM_011192 19192 Mm.288477 NM_011192 ENSMUSG00000078652 Psme3 AA410043|AU020960|Ki|PA28gamma|REGgamma|pa28g proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) protein-coding common_peak1_261_2884_-0.250656030499616_11.369027588283_8.92901320555192 chr1 178317842 178319608 + 8.92901320555192 NA promoter-TSS (NM_025511) promoter-TSS (NM_025511) -428 NM_025511 66359 Mm.489720 NM_025511 ENSMUSG00000026500 Cox20 2310005N03Rik|Fam36a COX20 Cox2 chaperone protein-coding common_peak1_114_1168_-0.404492823559826_9.98881280275174_8.92852330877606 chr16 43662810 43664298 + 8.92852330877606 NA intron (NM_001146325, intron 1 of 3) intron (NM_001146325, intron 1 of 3) 630 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak2_34_353_-0.786159835559463_8.07452563230327_8.92789708732767 chr19 47865081 47865882 + 8.92789708732767 NA promoter-TSS (NM_026619) promoter-TSS (NM_026619) -64 NM_030051 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak1_100_528_0.509724281491431_9.30198605285974_8.92734741526098 chr10 29312525 29313724 + 8.92734741526098 NA promoter-TSS (NM_001110195) promoter-TSS (NM_001110195) -42 NM_001110195 52665 Mm.28930 NM_025855 ENSMUSG00000019883 Echdc1 1700028A24Rik|AI314462|AI930038|D10Ertd667e|MMCD enoyl Coenzyme A hydratase domain containing 1 protein-coding common_peak2_100_528_0.509724281491431_9.30198605285974_8.92734741526098 chr4 62501550 62503003 + 8.92734741526098 NA promoter-TSS (NM_024257) promoter-TSS (NM_024257) -76 NM_024257 72748 Mm.41506 NM_024257 ENSMUSG00000038422 Hdhd3 2810435D12Rik haloacid dehalogenase-like hydrolase domain containing 3 protein-coding common_peak2_216_2335_-0.279606244880242_11.0500214364399_8.92696895919365 chr1 171410517 171413013 + 8.92696895919365 NA promoter-TSS (NM_009480) promoter-TSS (NM_009480) 84 NM_009480 22278 Mm.8 NM_009480 ENSMUSG00000026641 Usf1 bHLHb11 upstream transcription factor 1 protein-coding common_peak2_327_2710_0.236670800786783_11.5229447982311_8.92656755884693 chr19 53310245 53315497 + 8.92656755884693 NA intron (NM_001008542, intron 1 of 5) CpG 2365 NM_001008542 17859 Mm.2154 NM_010847 ENSMUSG00000025025 Mxi1 ENSMUSG00000067085|Gm10197|Mad2|bHLHc11 MAX interactor 1, dimerization protein protein-coding common_peak1_236_1751_0.291446547665428_10.9205103334339_8.9262708840034 chr1 37996459 37998939 + 8.9262708840034 NA promoter-TSS (NM_172054) promoter-TSS (NM_172054) -311 NM_198303 226982 Mm.260943 NM_198303 ENSMUSG00000026083 Eif5b A030003E17Rik|BC018347|IF2 eukaryotic translation initiation factor 5B protein-coding common_peak1_111_614_0.475346772164036_9.50211598630862_8.92548358343026 chr4 135069494 135070642 + 8.92548358343026 NA Intergenic Intergenic -50577 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak1_77_778_-0.505923757267452_9.35251763942794_8.92546316173934 chr19 5728762 5729950 + 8.92546316173934 NA TTS (NM_020491) TTS (NM_020491) 310 NM_181452 17826 Mm.391142 NM_023166 ENSMUSG00000024939 Fam89b 1110021A21Rik|MMTV|Mtvr2 family with sequence similarity 89, member B protein-coding common_peak2_77_778_-0.505923757267452_9.35251763942794_8.92546316173934 chr4 139622169 139623654 + 8.92546316173934 NA promoter-TSS (NM_175438) promoter-TSS (NM_175438) 17 NM_175438 212647 Mm.273571 NM_175438 ENSMUSG00000028737 Aldh4a1 A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1 aldehyde dehydrogenase 4 family, member A1 protein-coding common_peak1_74_747_-0.516744751597971_9.28852208408865_8.92527170854243 chr2 166707497 166708441 + 8.92527170854243 NA intron (NR_105783, intron 2 of 2) intron (NR_105783, intron 2 of 2) 5863 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding common_peak1_19_214_-1.05705862195868_7.21966353861012_8.92253413947842 chr2 91236447 91236962 + 8.92253413947842 NA promoter-TSS (NR_015464) promoter-TSS (NR_015464) 362 NM_028119 107986 Mm.389334 NM_028119 ENSMUSG00000002109 Ddb2 2610043A19Rik damage specific DNA binding protein 2 protein-coding common_peak1_19_214_-1.05705862195868_7.21966353861012_8.92253413947842-2 chr6 112946073 112946566 + 8.92253413947842 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 947 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak1_20_224_-1.03630654741854_7.29562791750777_8.92248010662833 chr12 111158949 111159362 + 8.92248010662833 NA TTS (NR_130987) TTS (NR_130987) -7215 NM_001286122 22031 Mm.27431 NM_011632 ENSMUSG00000021277 Traf3 AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn TNF receptor-associated factor 3 protein-coding common_peak1_20_224_-1.03630654741854_7.29562791750777_8.92248010662833-2 chr14 54230132 54230729 + 8.92248010662833 NA Intergenic MIRc|SINE|MIR 23499 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_102_544_0.501435464112451_9.34083015172051_8.9221112946961 chrX 7713693 7714869 + 8.9221112946961 NA Intergenic CpG -7939 NM_172372 54636 Mm.305725 NM_172372 ENSMUSG00000039382 Wdr45 C79260|DXImx38e|JM5|Sfc19|WIPI-4|Wdrx1 WD repeat domain 45 protein-coding common_peak2_238_1771_0.28994162553756_10.9361337013238_8.92116442187209 chr18 53861419 53863769 + 8.92116442187209 NA 5' UTR (NM_152809, exon 1 of 13) 5' UTR (NM_152809, exon 1 of 13) 481 NM_152809 70425 Mm.368668 NM_152809 ENSMUSG00000073563 Csnk1g3 3300002K07Rik|C330049O21Rik casein kinase 1, gamma 3 protein-coding common_peak1_53_202_0.783483960840774_8.05707789760556_8.92107727615575 chr7 83651764 83652806 + 8.92107727615575 NA exon (NM_010551, exon 14 of 19) exon (NM_010551, exon 14 of 19) 20268 NM_023377 170460 Mm.357953 NM_023377 ENSMUSG00000046027 Stard5 2310058G22Rik|AI607880|D7Ertd152e StAR-related lipid transfer (START) domain containing 5 protein-coding unique_peak2_25_270_-0.926727796712939_7.6187851429974_8.92031655122499 chr19 7240263 7241405 + 8.92031655122499 NA intron (NM_027643, intron 1 of 7) intron (NM_027643, intron 1 of 7) 388 NM_027643 70999 Mm.329605 NM_027643 ENSMUSG00000024764 Naa40 4931433E08Rik|AU023197|Nat11 N(alpha)-acetyltransferase 40, NatD catalytic subunit protein-coding common_peak2_406_3607_0.206181441083883_11.9200743437973_8.91781291527439 chr4 101291511 101294286 + 8.91781291527439 NA Intergenic Intergenic -27616 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_27_64_1.26419693698947_6.65446628152319_8.91759493911927 chr14 72777598 72778060 + 8.91759493911927 NA Intergenic Intergenic -67826 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding common_peak1_27_64_1.26419693698947_6.65446628152319_8.91759493911927 chr1 119912861 119913158 + 8.91759493911927 NA intron (NM_175106, intron 1 of 1) intron (NM_175106, intron 1 of 1) 159 NM_175106 66343 Mm.49942 NM_175106 ENSMUSG00000036975 Tmem177 2300008B03Rik transmembrane protein 177 protein-coding common_peak1_27_64_1.26419693698947_6.65446628152319_8.91759493911927-2 chr2 166490143 166490630 + 8.91759493911927 NA Intergenic Intergenic 42935 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak1_42_429_-0.702465679335509_8.39696000992171_8.91430044570308 chr6 86548192 86549029 + 8.91430044570308 NA intron (NR_037960, intron 3 of 4) (TTTC)n|Simple_repeat|Simple_repeat 21209 NR_037961 72012 Mm.349174 NR_037960 ENSMUSG00000097048 1600020E01Rik - RIKEN cDNA 1600020E01 gene ncRNA common_peak1_51_517_-0.634774731859267_8.69942092175692_8.91343136835852 chr16 24629359 24630314 + 8.91343136835852 NA intron (NM_001145952, intron 4 of 11) intron (NM_001145952, intron 4 of 11) -92019 NM_001145954 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_210_2263_-0.28405890369292_11.0026287909854_8.91307906725954 chr9 111270390 111272993 + 8.91307906725954 NA promoter-TSS (NM_026810) promoter-TSS (NM_026810) -83 NM_026810 17350 Mm.486383 NM_026810 ENSMUSG00000032498 Mlh1 1110035C23Rik|AI317206|AI325952|AI561766 mutL homolog 1 protein-coding common_peak1_33_92_1.0909897610525_7.08465369163428_8.91249713509555 chr9 92541750 92542668 + 8.91249713509555 NA promoter-TSS (NM_001142916) promoter-TSS (NM_001142916) -14 NM_011961 26432 Mm.79983 NM_011961 ENSMUSG00000032374 Plod2 D530025C14Rik|LH2|Plod-2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 protein-coding common_peak2_33_92_1.0909897610525_7.08465369163428_8.91249713509555 chr15 53345424 53346204 + 8.91249713509555 NA 5' UTR (NM_010162, exon 1 of 11) 5' UTR (NM_010162, exon 1 of 11) 369 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak2_79_798_-0.497692842924488_9.39320527146573_8.91155031467076 chr10 39170539 39172563 + 8.91155031467076 NA Intergenic Intergenic -7757 NM_001127376 327743 Mm.208111 NM_001127376 ENSMUSG00000062074 Wisp3 CCN6|ENSMUSG00000062074|Gm735|WISP-3 WNT1 inducible signaling pathway protein 3 protein-coding common_peak1_79_798_-0.497692842924488_9.39320527146573_8.91155031467076 chr13 24761229 24762218 + 8.91155031467076 NA intron (NM_020567, intron 1 of 6) CpG 214 NM_020567 57441 Mm.12239 NM_020567 ENSMUSG00000006715 Gmnn AW546347|Gem geminin protein-coding common_peak1_47_477_-0.660479028702296_8.5706272936296_8.91108066617153 chr13 48877881 48878709 + 8.91108066617153 NA TTS (NM_001033268) TTS (NM_001033268) -7410 NM_011078 18676 Mm.486213 NM_011078 ENSMUSG00000038025 Phf2 GRC5 PHD finger protein 2 protein-coding common_peak1_44_448_-0.684392997176515_8.46837513615289_8.91044313336012 chr1 161788587 161789179 + 8.91044313336012 NA promoter-TSS (NM_001205243) promoter-TSS (NM_001205243) -388 NM_010177 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_93_944_-0.45442712049606_9.65695695886041_8.90962484777964 chrX 36795061 36797097 + 8.90962484777964 NA intron (NM_007451, intron 1 of 3) CpG 482 NM_007451 11740 Mm.371544 NM_007451 ENSMUSG00000016319 Slc25a5 Ant2 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 protein-coding common_peak2_232_2528_-0.26823976078939_11.1702314412685_8.90837575025383 chr5 135954885 135958750 + 8.90837575025383 NA Intergenic Intergenic 17659 NM_001160366 109267 Mm.332750 NM_001160366 ENSMUSG00000029699 Ssc4d C330016E03Rik|S4D-SRCRB|SRCRB-S4D|Srcrb4d scavenger receptor cysteine rich family, 4 domains protein-coding common_peak2_49_497_-0.647374428745341_8.63631471769541_8.90797469424359 chr10 19515749 19517717 + 8.90797469424359 NA Intergenic Intergenic -75225 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_49_497_-0.647374428745341_8.63631471769541_8.90797469424359 chr11 115406821 115407606 + 8.90797469424359 NA intron (NM_026729, intron 2 of 5) intron (NM_026729, intron 2 of 5) 3447 NM_026729 68572 Mm.271062 NM_026729 ENSMUSG00000018858 Mrpl58 1110001A02Rik|1110002E03Rik|Ict1|MRP-L58 mitochondrial ribosomal protein L58 protein-coding common_peak2_150_940_0.390469472257015_10.073285648857_8.9060811052495 chr8 128548853 128552217 + 8.9060811052495 NA Intergenic Intergenic -135119 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_76_767_-0.50824095994809_9.33084202074711_8.90571581398764 chr9 13322311 13324305 + 8.90571581398764 NA Intergenic Intergenic 76329 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding common_peak2_221_2395_-0.275881714237734_11.0884713356699_8.90539473614187 chr17 51177971 51180230 + 8.90539473614187 NA 5' UTR (NM_001285991, exon 1 of 23) 5' UTR (NM_001285991, exon 1 of 23) 252 NM_028162 72238 Mm.120650 NM_028162 ENSMUSG00000023923 Tbc1d5 1600014N05Rik TBC1 domain family, member 5 protein-coding common_peak2_66_665_-0.548834666921538_9.10496103361049_8.9020193542703 chr5 100525604 100527316 + 8.9020193542703 NA intron (NM_012001, intron 1 of 9) intron (NM_012001, intron 1 of 9) 8151 NM_012001 26891 Mm.957 NM_012001 ENSMUSG00000035297 Cops4 AW208976|D5Ertd774e COP9 signalosome subunit 4 protein-coding common_peak2_81_818_-0.489664065389226_9.43288760894639_8.90119621317906 chr10 117981527 117983936 + 8.90119621317906 NA Intergenic Intergenic 57272 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA unique_peak1_16_22_1.87997430491716_5.46354910851559_8.90108298319599-4 chr6 50370485 50370929 + 8.90108298319599 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 12130 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak1_16_22_1.87997430491716_5.46354910851559_8.90108298319599-2 chr11 78032453 78032886 + 8.90108298319599 NA exon (NM_183286, exon 2 of 5) exon (NM_183286, exon 2 of 5) 356 NM_183286 70451 Mm.390342 NM_183286 ENSMUSG00000020834 Dhrs13 2610209N15Rik dehydrogenase/reductase (SDR family) member 13 protein-coding unique_peak1_16_22_1.87997430491716_5.46354910851559_8.90108298319599-5 chr6 86977422 86977893 + 8.90108298319599 NA intron (NM_177762, intron 15 of 19) intron (NM_177762, intron 15 of 19) -32179 NM_001170591 56748 Mm.23809 NM_020045 ENSMUSG00000029993 Nfu1 0610006G17Rik|CGI-33|Hirip5 NFU1 iron-sulfur cluster scaffold protein-coding unique_peak1_16_22_1.87997430491716_5.46354910851559_8.90108298319599-3 chr2 128374138 128374514 + 8.90108298319599 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 55025 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA unique_peak1_16_22_1.87997430491716_5.46354910851559_8.90108298319599 chr10 26233827 26234236 + 8.90108298319599 NA intron (NM_001115154, intron 4 of 10) intron (NM_001115154, intron 4 of 10) 4324 NM_001115154 268288 Mm.213322 NM_001013766 ENSMUSG00000051354 Samd3 Gm623 sterile alpha motif domain containing 3 protein-coding unique_peak1_16_22_1.87997430491716_5.46354910851559_8.90108298319599-6 chr9 122130295 122130698 + 8.90108298319599 NA intron (NM_001164572, intron 1 of 5) B3A|SINE|B2 13230 NM_133741 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak1_45_458_-0.677277228133942_8.50371172934684_8.90044685627989-2 chr4 150964665 150965432 + 8.90044685627989 NA Intergenic B3|SINE|B2 -32049 NM_011910 24111 Mm.89984 NM_011910 ENSMUSG00000028963 Uts2 UII|Ucn2|prepro-UII urotensin 2 protein-coding common_peak1_45_458_-0.677277228133942_8.50371172934684_8.90044685627989 chr13 23756886 23757533 + 8.90044685627989 NA exon (NM_178193, exon 1 of 1) exon (NM_178193, exon 1 of 1) 272 NM_178193 326620 Mm.261642 NM_178193 ENSMUSG00000069266 Hist1h4b - histone cluster 1, H4b protein-coding common_peak2_158_1011_0.376882706902087_10.1714349281454_8.90012257055901 chr10 128804035 128806383 + 8.90012257055901 NA promoter-TSS (NM_178066) promoter-TSS (NM_178066) -467 NM_028873 74330 Mm.296915 NM_028873 ENSMUSG00000025354 Dnajc14 5730551F12Rik|DNAJ|DRIP78|HDJ3|LIP6 DnaJ heat shock protein family (Hsp40) member C14 protein-coding common_peak2_106_1081_-0.420514364471043_9.86922760159129_8.89847795997521 chr9 66157625 66159885 + 8.89847795997521 NA intron (NM_010019, intron 1 of 11) intron (NM_010019, intron 1 of 11) 529 NM_010019 13143 Mm.304472 NM_010019 ENSMUSG00000032380 Dapk2 - death-associated protein kinase 2 protein-coding common_peak1_169_1782_-0.321836828586147_10.6391725733319_8.89739470253803 chr1 180362789 180365221 + 8.89739470253803 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -33456 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_26_278_-0.901913744989592_7.67316443933439_8.89734276715271 chr14 45218638 45219477 + 8.89734276715271 NA promoter-TSS (NM_027518) promoter-TSS (NM_027518) 368 NM_172597 70561 Mm.28129 NM_172597 ENSMUSG00000021830 Txndc16 5730420B22Rik|C77647 thioredoxin domain containing 16 protein-coding common_peak2_311_2536_0.243872579102991_11.4308440936154_8.89619008412691 chr16 36933718 36937564 + 8.89619008412691 NA intron (NM_008225, intron 1 of 13) intron (NM_008225, intron 1 of 13) 658 NM_008225 15163 Mm.4091 NM_008225 ENSMUSG00000022831 Hcls1 AW213261|HS1 hematopoietic cell specific Lyn substrate 1 protein-coding common_peak2_465_4310_0.188917024881713_12.1682653596193_8.89551152891059 chr15 81585264 81587775 + 8.89551152891059 NA 5' UTR (NM_177821, exon 1 of 31) 5' UTR (NM_177821, exon 1 of 31) 305 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding common_peak2_31_325_-0.825862579919553_7.9357968642713_8.89451833110919 chr1 36546475 36547322 + 8.89451833110919 NA intron (NM_001310533, intron 1 of 3) intron (NM_001310533, intron 1 of 3) 354 NM_001310533 109346 Mm.247537 NM_026241 ENSMUSG00000079610 Ankrd39 9130416N05Rik|C030004B10Rik ankyrin repeat domain 39 protein-coding common_peak2_140_854_0.407484993806042_9.94352310667628_8.89312324972592 chr2 28523910 28527010 + 8.89312324972592 NA intron (NM_001145834, intron 1 of 17) intron (NM_001145834, intron 1 of 17) -8004 NM_001145835 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding common_peak2_152_1589_-0.343005756890978_10.4633081717262_8.8926789953114 chr10 34170349 34174620 + 8.8926789953114 NA intron (NM_172508, intron 2 of 5) intron (NM_172508, intron 2 of 5) 35067 NM_172508 212898 Mm.34557 NM_172508 ENSMUSG00000039497 Dse 6030499O08|AI480506|B130024B19Rik|DS-epi1|Sart2 dermatan sulfate epimerase protein-coding common_peak1_152_1589_-0.343005756890978_10.4633081717262_8.8926789953114 chr6 124930293 124932010 + 8.8926789953114 NA promoter-TSS (NM_001170341) promoter-TSS (NM_001170341) -237 NM_145385 30853 Mm.29737 NM_145385 ENSMUSG00000030120 Mlf2 AI256856|AU018944|C77284 myeloid leukemia factor 2 protein-coding common_peak2_78_787_-0.499952728343059_9.37207545528485_8.89018508967336 chr15 79949534 79951506 + 8.89018508967336 NA Intergenic Intergenic -17874 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak1_78_787_-0.499952728343059_9.37207545528485_8.89018508967336 chr7 36655957 36656933 + 8.89018508967336 NA Intergenic Intergenic -41673 NM_172298 243931 Mm.44141 NM_172298 ENSMUSG00000021217 Tshz3 A630038G13Rik|Tsh3|Zfp537|mKIAA1474|teashirt3 teashirt zinc finger family member 3 protein-coding common_peak2_101_536_0.5055048103284_9.32153068314961_8.88942898488568 chr10 29312491 29313833 + 8.88942898488568 NA promoter-TSS (NM_001110195) promoter-TSS (NM_001110195) -4 NM_001110195 52665 Mm.28930 NM_025855 ENSMUSG00000019883 Echdc1 1700028A24Rik|AI314462|AI930038|D10Ertd667e|MMCD enoyl Coenzyme A hydratase domain containing 1 protein-coding common_peak1_104_1060_-0.425628710237946_9.83839458579579_8.88844372855854 chr7 19507691 19509240 + 8.88844372855854 NA promoter-TSS (NM_025960) promoter-TSS (NM_025960) -134 NM_177692 232946 Mm.64557 NM_177692 ENSMUSG00000057667 Bloc1s3 BC043666|Blos3|E230011O18|rp biogenesis of lysosomal organelles complex-1, subunit 3 protein-coding unique_peak1_14_16_2.09458128016101_5.13475348133084_8.88547752964914-3 chr2 135775611 135775967 + 8.88547752964914 NA intron (NM_013829, intron 1 of 36) intron (NM_013829, intron 1 of 36) 33959 NM_013829 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding unique_peak1_14_16_2.09458128016101_5.13475348133084_8.88547752964914-5 chr9 99137854 99138355 + 8.88547752964914 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 2107 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding unique_peak1_14_16_2.09458128016101_5.13475348133084_8.88547752964914-2 chr17 83918533 83918939 + 8.88547752964914 NA Intergenic Intergenic -71946 NM_025325 107766 Mm.30100 NM_025325 ENSMUSG00000000673 Haao 0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding unique_peak1_14_16_2.09458128016101_5.13475348133084_8.88547752964914-4 chr9 61960620 61960966 + 8.88547752964914 NA intron (NM_028748, intron 7 of 7) MTEa|LTR|ERVL-MaLR -13994 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding unique_peak1_14_16_2.09458128016101_5.13475348133084_8.88547752964914 chr1 80661469 80661914 + 8.88547752964914 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 3661 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak1_325_2689_0.237066297663739_11.5119236062759_8.88542817362032 chr7 128135047 128138759 + 8.88542817362032 NA intron (NM_021334, intron 14 of 29) intron (NM_021334, intron 14 of 29) 7335 NM_021334 16411 Mm.22378 NM_021334 ENSMUSG00000030789 Itgax AI449405|Cd11c|Cr4|N418 integrin alpha X protein-coding common_peak1_40_128_0.950216009642172_7.48633526024434_8.88516287516634 chr18 80550430 80551214 + 8.88516287516634 NA Intergenic Intergenic -6276 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_161_1691_-0.331559458940715_10.5587341236496_8.88224442410466 chr19 8920081 8921265 + 8.88224442410466 NA intron (NM_024256, intron 1 of 4) CpG 280 NM_024256 72727 Mm.259 NM_024256 ENSMUSG00000071649 B3gat3 2810405M13Rik beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) protein-coding common_peak1_22_242_-0.986351699512271_7.43163665384965_8.88173016071412 chr7 139967929 139968615 + 8.88173016071412 NA Intergenic Intergenic 10483 NM_001033465 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding unique_peak2_22_242_-0.986351699512271_7.43163665384965_8.88173016071412 chr17 36228702 36230126 + 8.88173016071412 NA Intergenic Intergenic 28432 NM_026308 67676 Mm.27131 NM_026308 ENSMUSG00000024446 Rpp21 0610037N01Rik ribonuclease P 21 subunit protein-coding common_peak2_22_242_-0.986351699512271_7.43163665384965_8.88173016071412 chr2 24949624 24950675 + 8.88173016071412 NA promoter-TSS (NM_147179) promoter-TSS (NM_147179) -9 NM_147179 67187 Mm.296106 NM_026021 ENSMUSG00000026974 Zmynd19 2700064H14Rik|AA536891|AU014915|mizip zinc finger, MYND domain containing 19 protein-coding common_peak2_139_1442_-0.360185247594952_10.3147629606937_8.88066903641376 chr4 43477662 43479814 + 8.88066903641376 NA Intergenic Intergenic 4971 NM_019436 54390 Mm.31775 NM_019436 ENSMUSG00000028460 Sit1 Sit suppression inducing transmembrane adaptor 1 protein-coding common_peak2_92_933_-0.456462018822071_9.63904773029862_8.87990178233332 chr4 108454347 108457194 + 8.87990178233332 NA Intergenic Intergenic -3656 NM_175472 230594 Mm.25181 NM_175472 ENSMUSG00000034610 Zcchc11 6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191 zinc finger, CCHC domain containing 11 protein-coding common_peak2_393_4582_-0.196357642562658_12.063897749093_8.87822238630864 chr2 147009492 147014452 + 8.87822238630864 NA Intergenic Intergenic -1088 NM_011917 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding common_peak1_79_374_0.593612064620245_8.84755281769337_8.87712281163098 chr10 52381452 52382099 + 8.87712281163098 NA exon (NM_053187, exon 1 of 8) exon (NM_053187, exon 1 of 8) 349 NM_053187 94221 Mm.390258 NM_053187 ENSMUSG00000019861 Gopc 2210402P09Rik|AI844555|CAL|FIG|GOPC1|PIST golgi associated PDZ and coiled-coil motif containing protein-coding unique_peak1_34_97_1.06673587040833_7.14807777931937_8.87639165338223 chr4 147131911 147132644 + 8.87639165338223 NA Intergenic Intergenic -43589 NM_001039209 195531 Mm.270762 NM_001039209 ENSMUSG00000078496 Zfp982 Gm13152|OTTMUSG00000010671 zinc finger protein 982 protein-coding unique_peak2_18_205_-1.08613632378633_7.14343236529005_8.87639165338223 chr14 103531439 103532779 + 8.87639165338223 NA intron (NM_022886, intron 3 of 30) intron (NM_022886, intron 3 of 30) 18768 NM_022886 64929 Mm.244003 NM_022886 ENSMUSG00000022123 Scel 9230114I02Rik sciellin protein-coding common_peak1_150_1565_-0.344348112305489_10.4406944411383_8.8754833361288 chr19 8740755 8742533 + 8.8754833361288 NA promoter-TSS (NM_019829) promoter-TSS (NM_019829) -159 NM_019829 56389 Mm.153061 NM_019829 ENSMUSG00000010110 Stx5a 0610031F24Rik|D19Ertd627e|Stx5 syntaxin 5A protein-coding common_peak2_136_1409_-0.365141890751296_10.2789085019105_8.87384028309211 chr13 97137083 97138855 + 8.87384028309211 NA promoter-TSS (NM_001146043) promoter-TSS (NM_001146043) 32 NM_001271464 320806 Mm.219675 NM_177266 ENSMUSG00000021666 Gfm2 6530419G12Rik|A930009M04Rik|EF-G2mt|EFG2|MST027|RRF2mt G elongation factor, mitochondrial 2 protein-coding common_peak2_54_545_-0.611466122533937_8.78702407965288_8.87243611456645 chr16 57606376 57607354 + 8.87243611456645 NA promoter-TSS (NM_025599) promoter-TSS (NM_025599) 2 NM_025599 66497 Mm.425976 NM_025599 ENSMUSG00000022748 Cmss1 1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629 cms small ribosomal subunit 1 protein-coding unique_peak1_15_19_1.97432516823781_5.30909067900627_8.87067278291826 chr6 136548306 136548758 + 8.87067278291826 NA intron (NM_019426, intron 1 of 14) intron (NM_019426, intron 1 of 14) 29681 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_15_19_1.97432516823781_5.30909067900627_8.87067278291826 chr2 163701574 163701950 + 8.87067278291826 NA intron (NM_011106, intron 1 of 3) intron (NM_011106, intron 1 of 3) 7725 NM_011106 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding unique_peak2_4_79_-2.0840184896293_5.27991885007271_8.87067278291824-2 chr6 99401066 99401784 + 8.87067278291824 NA intron (NM_053202, intron 1 of 18) intron (NM_053202, intron 1 of 18) 33920 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_4_79_-2.0840184896293_5.27991885007271_8.87067278291824 chr3 21049417 21049789 + 8.87067278291824 NA Intergenic Intergenic -682426 NM_175086 11608 Mm.134863 NM_175086 ENSMUSG00000054988 Agtr1b AT1B|AT2R1B|Agtr-1b|Angtr-1b angiotensin II receptor, type 1b protein-coding common_peak2_30_78_1.1629014565572_6.8852314764557_8.87058003521791 chr2 90583846 90584395 + 8.87058003521791 NA Intergenic Intergenic -3473 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_30_78_1.1629014565572_6.8852314764557_8.87058003521791 chr4 86873871 86874482 + 8.87058003521791 NA promoter-TSS (NM_139306) promoter-TSS (NM_139306) -238 NM_001290543 230379 Mm.45019 NM_139306 ENSMUSG00000038007 Acer2 2410116I05Rik|Asah3l|CRG-L1|maCER2 alkaline ceramidase 2 protein-coding common_peak1_30_78_1.1629014565572_6.8852314764557_8.87058003521791-2 chr5 21374714 21375351 + 8.87058003521791 NA intron (NM_008013, intron 1 of 1) intron (NM_008013, intron 1 of 1) 2359 NM_008013 14190 Mm.292100 NM_008013 ENSMUSG00000039899 Fgl2 AI385601|musfiblp fibrinogen-like protein 2 protein-coding common_peak1_73_332_0.627017595326505_8.69288716473451_8.8699661496901 chr9 66897018 66897923 + 8.8699661496901 NA intron (NM_173413, intron 1 of 7) RLTR9A3|LTR|ERVK 22235 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak2_138_837_0.41117834709325_9.91639560724598_8.86992988095438 chr2 126489543 126492285 + 8.86992988095438 NA intron (NM_001080944, intron 1 of 27) intron (NM_001080944, intron 1 of 27) 639 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak1_274_2142_0.263980470587688_11.1974063699704_8.86812500380768 chr6 149187242 149189373 + 8.86812500380768 NA intron (NM_001113424, intron 1 of 6) PB1D7|SINE|Alu 405 NM_001113424 232566 Mm.209147 NM_001113424 ENSMUSG00000068250 Amn1 5830467E07Rik|A230083D09|C730024G19Rik antagonist of mitotic exit network 1 protein-coding common_peak1_32_334_-0.810697337684256_7.98266861650301_8.86683649050522 chr11 62666992 62667694 + 8.86683649050522 NA TTS (NM_175002) TTS (NM_175002) 18679 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding unique_peak2_32_334_-0.810697337684256_7.98266861650301_8.86683649050522 chr1 59119454 59120728 + 8.86683649050522 NA promoter-TSS (NM_001037812) promoter-TSS (NM_001037812) 5 NM_001033449 381259 Mm.261275 NM_001033449 ENSMUSG00000038079 Tmem237 AI853305|Als2cr4|Gm972 transmembrane protein 237 protein-coding common_peak1_12_151_-1.31911857998901_6.58836822344908_8.86682553645808 chr7 4651438 4651767 + 8.86682553645808 NA intron (NM_172894, intron 1 of 23) intron (NM_172894, intron 1 of 23) 7348 NM_172894 243819 Mm.258670 NM_172894 ENSMUSG00000052296 Ppp6r1 2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115 protein phosphatase 6, regulatory subunit 1 protein-coding common_peak2_123_712_0.44214856066313_9.69883254677545_8.86662184669824 chr12 111070864 111072718 + 8.86662184669824 NA intron (NM_198023, intron 2 of 11) intron (NM_198023, intron 2 of 11) 31993 NM_198023 217864 Mm.23808 NM_198023 ENSMUSG00000037896 Rcor1 5730409O11|6720480E22Rik|AU042633|D12Wsu95e|Rocr1|mKIAA0071 REST corepressor 1 protein-coding common_peak1_80_808_-0.493653809437099_9.41316898771143_8.86582911017603 chr6 47780852 47782343 + 8.86582911017603 NA Intergenic Intergenic 22055 NR_030485 735289 NR_030485 ENSMUSG00000076060 Mir704 Mirn704|mir-704|mmu-mir-704 microRNA 704 ncRNA common_peak2_241_1803_0.286195532566424_10.9600813895386_8.8647785371876 chr2 167491826 167494009 + 8.8647785371876 NA promoter-TSS (NM_170756) promoter-TSS (NM_170756) -43 NM_170756 263876 Mm.34342 NM_170756 ENSMUSG00000047030 Spata2 AI504642|mKIAA0757 spermatogenesis associated 2 protein-coding common_peak2_241_1803_0.286195532566424_10.9600813895386_8.8647785371876-2 chr4 103118582 103121525 + 8.8647785371876 NA intron (NM_001039081, intron 1 of 12) intron (NM_001039081, intron 1 of 12) 663 NM_001039081 71148 Mm.288721 NM_027696 ENSMUSG00000028522 Mier1 4933425I22Rik|5830411K19Rik|er1 MEIR1 treanscription regulator protein-coding common_peak2_68_685_-0.539469445926018_9.1523300432098_8.8647034993168 chr11 101062830 101064754 + 8.8647034993168 NA TTS (NM_016920) TTS (NM_016920) -6302 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding common_peak1_70_312_0.643140698914399_8.61158919638982_8.86467658424289 chr16 49797136 49798434 + 8.86467658424289 NA Intergenic Intergenic -57869 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_37_381_-0.750452313452501_8.2022026713095_8.86417647679166 chr12 69512692 69513472 + 8.86417647679166 NA Intergenic Intergenic -37532 NR_038061 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak2_37_381_-0.750452313452501_8.2022026713095_8.86417647679166 chr7 12949025 12950672 + 8.86417647679166 NA Intergenic Intergenic -16016 NM_178732 243834 Mm.133086 NM_178732 ENSMUSG00000004500 Zfp324 A930002M05|D430030K24Rik|ZF5128 zinc finger protein 324 protein-coding common_peak1_175_1165_0.352282603052522_10.3634933747268_8.86154897613127 chr8 86744891 86746621 + 8.86154897613127 NA promoter-TSS (NR_027829) promoter-TSS (NR_027829) 57 NR_027829 666945 Mm.391806 NR_027829 Gm10638 ENSMUSG00000074178 predicted gene 10638 ncRNA common_peak2_42_139_0.916444153308984_7.58750509359946_8.860678582336 chr17 7892347 7893520 + 8.860678582336 NA Intergenic Intergenic -33067 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding unique_peak2_21_232_-1.00438840196033_7.36199194367412_8.8602308383305 chr17 83995726 83996934 + 8.8602308383305 NA Intergenic MLT1F|LTR|ERVL-MaLR -2222 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak1_21_232_-1.00438840196033_7.36199194367412_8.8602308383305 chr11 96777766 96778291 + 8.8602308383305 NA promoter-TSS (NM_001163389) promoter-TSS (NM_001163389) -473 NM_001163389 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding common_peak1_82_828_-0.485722422327402_9.45236708033205_8.8577440524262 chr6 17637006 17638205 + 8.8577440524262 NA intron (NM_007604, intron 1 of 9) intron (NM_007604, intron 1 of 9) 507 NM_007604 12343 Mm.392504 NM_007604 ENSMUSG00000015733 Capza2 1110053K06Rik|AW208808|Cappa2 capping protein (actin filament) muscle Z-line, alpha 2 protein-coding common_peak2_101_1027_-0.431341460880066_9.78995381875385_8.85632669867633 chr18 36800538 36803067 + 8.85632669867633 NA promoter-TSS (NR_027885) promoter-TSS (NR_027885) 39 NR_027885 378472 Mm.482379 NR_027885 Vaultrc5 Gm22653|Mvg1 vault RNA component 5 ncRNA common_peak1_44_150_0.887773898239553_7.68229168844486_8.8559813599511 chr10 75435262 75436322 + 8.8559813599511 NA intron (NM_133995, intron 6 of 9) B2_Mm1t|SINE|B2 -13718 NR_045841 71125 Mm.399516 NR_045841 4933407G14Rik - RIKEN cDNA 4933407G14 gene ncRNA common_peak2_270_2993_-0.24439097271101_11.4256630197029_8.8537468299775 chr1 161732789 161736564 + 8.8537468299775 NA Intergenic Intergenic 53819 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_64_645_-0.558475834361028_9.05615243751341_8.85374371409142 chr4 106909401 106910358 + 8.85374371409142 NA Intergenic Intergenic -1591 NM_198438 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak1_489_4604_0.182608693996663_12.260289787977_8.85310972318003 chr5 37064084 37068483 + 8.85310972318003 NA intron (NM_178394, intron 1 of 12) B4A|SINE|B4 15426 NM_178394 76071 Mm.85280 NM_178394 ENSMUSG00000063646 Jakmip1 5830437M04Rik|C330021K24Rik|Gababrbp|Marlin-1 janus kinase and microtubule interacting protein 1 protein-coding unique_peak1_11_8_2.61723815546343_4.47854407917403_8.85213292503811 chr2 90543179 90543525 + 8.85213292503811 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 37295 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_169_1781_-0.321027462483075_10.6387678902804_8.85174554917895 chr15 77837964 77840156 + 8.85174554917895 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 3115 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_104_560_0.493723270068026_9.37871859564281_8.85163391670087 chr5 31526210 31527769 + 8.85163391670087 NA promoter-TSS (NM_009206) promoter-TSS (NM_009206) -6 NM_009206 20534 Mm.352407 NM_009206 ENSMUSG00000029141 Slc4a1ap kanadaptin solute carrier family 4 (anion exchanger), member 1, adaptor protein protein-coding common_peak2_120_1232_-0.391390239767391_10.0722619645191_8.85122397483585 chr17 25831960 25834244 + 8.85122397483585 NA 5' UTR (NM_019719, exon 1 of 7) 5' UTR (NM_019719, exon 1 of 7) 259 NM_019719 56424 Mm.277599 NM_019719 ENSMUSG00000039615 Stub1 0610033N24Rik|2210017D18Rik|2310040B03Rik|AW046544|Chip STIP1 homology and U-Box containing protein 1 protein-coding common_peak1_248_1874_0.280965505051027_11.0131576327961_8.85065498790409 chr1 195130381 195132392 + 8.85065498790409 NA 5' UTR (NM_013499, exon 1 of 10) 5' UTR (NM_013499, exon 1 of 10) 184 NM_013499 12946 Mm.301652 NM_013499 ENSMUSG00000016481 Cr1l Crry|Mcp|mCRY complement component (3b/4b) receptor 1-like protein-coding common_peak2_41_134_0.927271357934024_7.54045127601784_8.84750183552357 chr12 79028815 79029785 + 8.84750183552357 NA 5' UTR (NM_181073, exon 1 of 29) 5' UTR (NM_181073, exon 1 of 29) 137 NM_181073 211945 Mm.478321 NM_181073 ENSMUSG00000060716 Plekhh1 AV308913|C77772|D630024D12Rik|mKIAA1200 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 protein-coding unique_peak1_25_56_1.32253123047619_6.49415562940284_8.84581979711569 chr4 106651135 106651637 + 8.84581979711569 NA intron (NM_001285784, intron 1 of 1) intron (NM_001285784, intron 1 of 1) 317 NM_001083887 230577 Mm.134029 NM_172272 ENSMUSG00000043572 Pars2 BC027073 prolyl-tRNA synthetase (mitochondrial)(putative) protein-coding common_peak1_25_56_1.32253123047619_6.49415562940284_8.84581979711569-2 chr6 98992280 98992859 + 8.84581979711569 NA intron (NM_001197321, intron 8 of 17) intron (NM_001197321, intron 8 of 17) 35729 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_25_56_1.32253123047619_6.49415562940284_8.84581979711569 chr4 119232950 119233504 + 8.84581979711569 NA promoter-TSS (NM_001012400) promoter-TSS (NM_001012400) 312 NM_019782 56401 Mm.27961 NM_019782 ENSMUSG00000028641 P3h1 2410024C15Rik|Gros1|Lepre1 prolyl 3-hydroxylase 1 protein-coding common_peak1_133_795_0.42053139079243_9.84689031593986_8.84194524735416 chr19 6014616 6016169 + 8.84194524735416 NA promoter-TSS (NM_007600) promoter-TSS (NM_007600) -145 NM_007600 12333 Mm.6221 NM_007600 ENSMUSG00000024942 Capn1 Capa-1|Capa1|mu-calpin calpain 1 protein-coding common_peak1_27_287_-0.883360251424387_7.72824487573012_8.84000906393979 chr2 31082931 31083334 + 8.84000906393979 NA intron (NM_001177648, intron 5 of 16) intron (NM_001177648, intron 5 of 16) 13368 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_45_156_0.870452366388238_7.72984693208575_8.84000906393979 chr17 84854547 84855096 + 8.84000906393979 NA Intergenic B1_Mur3|SINE|Alu -64035 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak2_322_2658_0.237428384133651_11.4953822539245_8.83948620042717 chr15 97341391 97345179 + 8.83948620042717 NA intron (NM_172293, intron 3 of 5) intron (NM_172293, intron 3 of 5) -95998 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_67_675_-0.5441185529353_9.12882015981453_8.83806296925005 chr16 78546024 78547478 + 8.83806296925005 NA intron (NM_025967, intron 3 of 4) intron (NM_025967, intron 3 of 4) -13565 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak1_20_36_1.56802127816955_5.99346400471372_8.83597781310453 chr5 48372693 48373215 + 8.83597781310453 NA intron (NM_025755, intron 1 of 8) intron (NM_025755, intron 1 of 8) 562 NM_025755 66768 Mm.29409 NM_025755 ENSMUSG00000029089 Pacrgl 4933428G09Rik PARK2 co-regulated-like protein-coding unique_peak1_20_36_1.56802127816955_5.99346400471372_8.83597781310453-2 chr2 110017823 110018241 + 8.83597781310453 NA exon (NM_026613, exon 1 of 6) exon (NM_026613, exon 1 of 6) 215 NM_026613 68201 Mm.181767 NM_026613 ENSMUSG00000027160 Ccdc34 2810027O19Rik|4930522P10Rik|AI596202 coiled-coil domain containing 34 protein-coding unique_peak1_20_36_1.56802127816955_5.99346400471372_8.83597781310453 chr12 100202240 100202769 + 8.83597781310453 NA intron (NM_001313934, intron 2 of 5) intron (NM_001313934, intron 2 of 5) 2360 NM_001313934 12313 Mm.285993 NM_009790 ENSMUSG00000001175 Calm1 AI256814|AI327027|AI461935|AL024000|CaM|Calm calmodulin 1 protein-coding common_peak1_219_2369_-0.276155703026994_11.0725934922721_8.83440156709367 chr17 33918760 33920602 + 8.83440156709367 NA TTS (NM_020625) TTS (NM_020625) 203 NM_009318 21356 Mm.154457 NM_009318 ENSMUSG00000024308 Tapbp D17Wsu91e|TPN TAP binding protein protein-coding common_peak2_409_3645_0.204062317090967_11.9341300045846_8.83419571899786 chr6 128730348 128736681 + 8.83419571899786 NA Intergenic Intergenic -10468 NM_001099918 100043861 Mm.66911 NM_001099918 ENSMUSG00000079299 Klrb1 4930431A04Rik|Gm4696|Klrb1g|Klrb6|Ly-55|Ly55|NKR-P1G|Nkrp-1e|Nkrp1g killer cell lectin-like receptor subfamily B member 1 protein-coding common_peak1_96_499_0.519554078701322_9.22556132401275_8.83368447990242 chr17 15396285 15396905 + 8.83368447990242 NA intron (NR_033586, intron 1 of 10) intron (NR_033586, intron 1 of 10) 349 NM_024203 67544 Mm.35039 NM_024203 ENSMUSG00000014763 Fam120b 4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838 family with sequence similarity 120, member B protein-coding unique_peak1_19_32_1.64674010827232_5.86776417349462_8.83205411434535-3 chr16 17088974 17089502 + 8.83205411434535 NA exon (NM_001252445, exon 19 of 20) exon (NM_001252445, exon 19 of 20) 19099 NM_001291047 106369 Mm.237941 NM_023249 ENSMUSG00000022773 Ypel1 0610009L05Rik|1700016N17Rik|1700019O22Rik|4921520K19Rik|4930511F14Rik|AV118478|DGL-1|Dgl1|Ppil2|mdgl-1 yippee-like 1 (Drosophila) protein-coding unique_peak1_19_32_1.64674010827232_5.86776417349462_8.83205411434535-2 chr11 60937443 60937953 + 8.83205411434535 NA intron (NM_008928, intron 1 of 11) intron (NM_008928, intron 1 of 11) 5641 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding unique_peak1_19_32_1.64674010827232_5.86776417349462_8.83205411434535 chr10 80098655 80099138 + 8.83205411434535 NA intron (NM_183426, intron 1 of 31) intron (NM_183426, intron 1 of 31) 3806 NM_183426 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch homolog 2 (Drosophila) protein-coding unique_peak1_19_32_1.64674010827232_5.86776417349462_8.83205411434535-4 chr17 84152098 84152551 + 8.83205411434535 NA Intergenic Intergenic 35623 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_19_32_1.64674010827232_5.86776417349462_8.83205411434535 chr4 108348243 108348760 + 8.83205411434535 NA Intergenic Intergenic 20349 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding common_peak1_139_1441_-0.359185112344576_10.3142628930685_8.82999641897599 chr17 27622588 27624298 + 8.82999641897599 NA promoter-TSS (NM_019837) promoter-TSS (NM_019837) 9 NM_019837 56409 Mm.144699 NM_019837 ENSMUSG00000024213 Nudt3 1110011B09Rik|AA960325|Dipp|Dipp1 nudix (nucleotide diphosphate linked moiety X)-type motif 3 protein-coding common_peak2_104_1059_-0.424268318773743_9.83771439006369_8.82936711832945 chr17 33628351 33630066 + 8.82936711832945 NA non-coding (NR_034153, exon 1 of 7) non-coding (NR_034153, exon 1 of 7) 116 NM_026712 328801 Mm.181488 NM_026712 ENSMUSG00000073423 Zfp414 0610030H11Rik|Znf414 zinc finger protein 414 protein-coding common_peak1_46_162_0.85440293319494_7.77592962082855_8.82896165164604-2 chrX 11664708 11665618 + 8.82896165164604 NA Intergenic CpG 337341 NM_001114529 236663 Mm.473680 NM_001114529 ENSMUSG00000069038 H2al1j EG236663|Gm4906 H2A histone family member L1J protein-coding common_peak1_46_162_0.85440293319494_7.77592962082855_8.82896165164604 chr1 43130255 43131343 + 8.82896165164604 NA intron (NM_001289533, intron 4 of 5) intron (NM_001289533, intron 4 of 5) 32089 NM_133818 98404 Mm.28817 NM_133818 ENSMUSG00000010290 AI597479 - expressed sequence AI597479 protein-coding common_peak1_367_3161_0.218288396480562_11.7357658505986_8.82758535132958 chr8 56550228 56552460 + 8.82758535132958 NA promoter-TSS (NM_001009951) promoter-TSS (NM_001009951) 210 NM_015791 50753 Mm.251174 NM_015791 ENSMUSG00000038206 Fbxo8 Fbx8 F-box protein 8 protein-coding common_peak2_400_3540_0.206941856350626_11.8934120565662_8.82708511669804 chr3 104862820 104866209 + 8.82708511669804 NA promoter-TSS (NM_001253702) promoter-TSS (NM_001253702) 8 NM_153091 229681 Mm.206379 NM_153091 ENSMUSG00000045576 St7l St7r suppression of tumorigenicity 7-like protein-coding common_peak2_278_2185_0.260873551368968_11.2245144613564_8.82659289259662 chr7 126790924 126795172 + 8.82659289259662 NA promoter-TSS (NM_019674) promoter-TSS (NM_019674) -577 NM_019674 56420 Mm.41998 NM_019674 ENSMUSG00000030697 Ppp4c 1110002D08Rik|AU016079|Ppx protein phosphatase 4, catalytic subunit protein-coding common_peak1_116_1188_-0.398455033984511_10.0163054827534_8.82621131058078 chr11 83066548 83068174 + 8.82621131058078 NA intron (NM_011408, intron 1 of 1) RLTR11A|LTR|ERVK 2249 NM_011408 20556 Mm.278689 NM_011408 ENSMUSG00000072620 Slfn2 Shlf2 schlafen 2 protein-coding common_peak1_34_352_-0.782078658747647_8.07248504389736_8.82595292946633 chr7 127145562 127146102 + 8.82595292946633 NA Intergenic RMER10A|LTR|ERVL -8009 NM_001037810 20737 Mm.283714 NM_009259 ENSMUSG00000051457 Spn A630014B01Rik|Cd43|Galgp|Ly-48|Ly48 sialophorin protein-coding common_peak1_279_2196_0.259963493659328_11.2313009012529_8.82505834996765 chr12 111159653 111161849 + 8.82505834996765 NA intron (NR_130987, intron 3 of 3) intron (NR_130987, intron 3 of 3) -5619 NM_001286122 22031 Mm.27431 NM_011632 ENSMUSG00000021277 Traf3 AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn TNF receptor-associated factor 3 protein-coding common_peak1_178_1194_0.346749682554657_10.3961697441454_8.8247433144527 chr1 7088921 7090657 + 8.8247433144527 NA intron (NM_183028, intron 1 of 5) intron (NM_183028, intron 1 of 5) 869 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding common_peak1_50_506_-0.638171159875885_8.6667563570654_8.82447805730038 chr8 84004358 84005439 + 8.82447805730038 NA promoter-TSS (NR_106191) promoter-TSS (NR_106191) -730 NR_106191 102466886 NR_106191 ENSMUSG00000098823 Mir8111 Gm27823|mmu-mir-8111 microRNA 8111 ncRNA common_peak1_47_476_-0.657457676727059_8.56911661764198_8.82324643227754 chr5 140636958 140637970 + 8.82324643227754 NA intron (NM_001308040, intron 1 of 12) intron (NM_001308040, intron 1 of 12) 11567 NM_001308040 78339 Mm.28947 NM_175274 ENSMUSG00000036565 Ttyh3 2900029G13Rik|AI414930|TTY3|mTTY3 tweety family member 3 protein-coding unique_peak2_13_160_-1.27096443928305_6.69543465847309_8.82317843445209 chr5 136986257 136986901 + 8.82317843445209 NA promoter-TSS (NM_011962) promoter-TSS (NM_011962) 325 NM_001310747 70103 Mm.273147 NM_027318 ENSMUSG00000059518 Znhit1 2700001K05Rik|ZNFN4A1 zinc finger, HIT domain containing 1 protein-coding common_peak2_222_2405_-0.273937053221672_11.0954524005652_8.82297709533876 chr13 55599266 55602309 + 8.82297709533876 NA intron (NM_146045, intron 1 of 5) intron (NM_146045, intron 1 of 5) 891 NM_001311137 218271 Mm.139825 NM_146045 ENSMUSG00000021504 B4galt7 - xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) protein-coding common_peak2_130_1341_-0.37308169435331_10.2036281090235_8.82266242400323 chr5 130254323 130256926 + 8.82266242400323 NA promoter-TSS (NM_023248) promoter-TSS (NM_023248) 5 NM_178897 100929 Mm.271296 NM_178897 ENSMUSG00000056310 Tyw1 AW125391|Rsafd1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) protein-coding common_peak1_42_428_-0.699106667245594_8.39528050387675_8.82173946233592 chr13 60839325 60840232 + 8.82173946233592 NA Intergenic Intergenic 24638 NM_178098 214639 Mm.19839 NM_178098 ENSMUSG00000050345 4930486L24Rik AW545031 RIKEN cDNA 4930486L24 gene protein-coding common_peak2_154_1610_-0.338952987093942_10.4842642851596_8.82073073233421 chr12 72084489 72086840 + 8.82073073233421 NA promoter-TSS (NM_001205067) promoter-TSS (NM_001205067) -175 NM_001205067 104771 Mm.258935 NM_024205 ENSMUSG00000005078 Jkamp 1200003C05Rik|2310047L11Rik|Jamp JNK1/MAPK8-associated membrane protein protein-coding common_peak2_30_315_-0.837098543442796_7.8852314764557_8.82004989056536 chr6 136828357 136829107 + 8.82004989056536 NA promoter-TSS (NM_178776) promoter-TSS (NM_178776) -111 NM_178776 320135 Mm.386899 NM_178776 ENSMUSG00000047515 BC049715 - cDNA sequence BC049715 protein-coding common_peak1_44_447_-0.681176284492972_8.46676677981112_8.81985577275592 chr4 135067288 135067944 + 8.81985577275592 NA Intergenic MIR|SINE|MIR -53029 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_65_279_0.674649241902269_8.4666076378961_8.81985577275582 chr16 57495276 57496567 + 8.81985577275582 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) -53321 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_69_694_-0.53281114190098_9.17446359666038_8.81916556691547 chr7 114478803 114479858 + 8.81916556691547 NA intron (NM_011055, intron 1 of 15) intron (NM_011055, intron 1 of 15) 64076 NM_011055 18576 Mm.430730 NM_011055 ENSMUSG00000030671 Pde3b 9830102A01Rik|AI847709 phosphodiesterase 3B, cGMP-inhibited protein-coding common_peak1_69_694_-0.53281114190098_9.17446359666038_8.81916556691547-2 chr8 94412349 94413660 + 8.81916556691547 NA Intergenic Intergenic 22099 NR_015514 320377 Mm.486022 NR_015514 9330175E14Rik A630085K21 RIKEN cDNA 9330175E14 gene ncRNA common_peak1_98_995_-0.438547468253917_9.74072819794112_8.81832365041525 chr4 59230644 59231853 + 8.81832365041525 NA Intergenic Intergenic -28803 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_213_2297_-0.280580352103984_11.0258729065941_8.81697011035098 chr7 141454053 141456758 + 8.81697011035098 NA non-coding (NR_028142, exon 1 of 10) non-coding (NR_028142, exon 1 of 10) 217 NM_001163689 66853 Mm.29998 NM_025802 ENSMUSG00000025509 Pnpla2 0610039C21Rik|1110001C14Rik|Atgl|TTS-2.2 patatin-like phospholipase domain containing 2 protein-coding common_peak2_56_564_-0.597608337752376_8.84330288842636_8.81494818221197 chr18 80200051 80201694 + 8.81494818221197 NA promoter-TSS (NM_199197) promoter-TSS (NM_199197) -253 NM_199197 68731 Mm.186936 NM_199197 ENSMUSG00000024570 Rbfa 1110032A13Rik|AI595940 ribosome binding factor A protein-coding common_peak1_56_564_-0.597608337752376_8.84330288842636_8.81494818221197 chr16 91464327 91465074 + 8.81494818221197 NA promoter-TSS (NR_077219) promoter-TSS (NR_077219) -404 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak2_309_2517_0.243337535079966_11.419731335259_8.81441442477287 chr2 166225600 166229400 + 8.81441442477287 NA Intergenic Intergenic -46408 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 OTTMUSG00000001131 predicted gene 11468 ncRNA common_peak2_28_69_1.2193802975676_6.73897316572877_8.8139432737347 chr19 18583008 18583719 + 8.8139432737347 NA intron (NM_017375, intron 9 of 9) intron (NM_017375, intron 9 of 9) 48450 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_28_69_1.2193802975676_6.73897316572877_8.8139432737347 chr1 161781450 161782049 + 8.8139432737347 NA exon (NM_010177, exon 4 of 4) exon (NM_010177, exon 4 of 4) 6746 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_41_419_-0.710158562681269_8.35916623632549_8.81382892698982 chr11 78182530 78183772 + 8.81382892698982 NA promoter-TSS (NR_037683) promoter-TSS (NR_037683) -38 NR_037683 100529077 NR_037683 Snord42b MBII-287|U42B small nucleolar RNA, C/D box 42B snoRNA common_peak2_197_2107_-0.293592376636694_10.8948629633189_8.81359367581443 chr2 45099673 45107019 + 8.81359367581443 NA intron (NM_001289521, intron 1 of 8) intron (NM_001289521, intron 1 of 8) 6931 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak1_16_187_-1.15105259070347_6.97906255632591_8.813436027005 chr17 12750552 12750908 + 8.813436027005 NA intron (NM_010515, intron 1 of 47) intron (NM_010515, intron 1 of 47) 9419 NR_027784 104103 Mm.26553 NR_002853 ENSMUSG00000078247 Airn 2810051F02Rik|2810434M15Rik|AI256653|AI597500|AW049873|Air|B930018I07Rik|D17Ertd663e|IGF2RAS antisense Igf2r RNA ncRNA common_peak2_85_858_-0.474174839698158_9.50942690128938_8.81281052393188 chr9 13303273 13305206 + 8.81281052393188 NA Intergenic Intergenic 57260 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding common_peak2_199_1391_0.322908629846724_10.6043978107721_8.81194314480591 chr10 122798958 122801881 + 8.81194314480591 NA intron (NM_176919, intron 2 of 8) intron (NM_176919, intron 2 of 8) 121104 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak1_207_1468_0.31463949764372_10.6779384293781_8.81143593864024 chr5 142440931 142442707 + 8.81143593864024 NA intron (NM_199068, intron 2 of 8) intron (NM_199068, intron 2 of 8) -22112 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding common_peak1_45_457_-0.674130672817078_8.5021384516884_8.81089051810972 chr4 32074175 32074949 + 8.81089051810972 NA Intergenic B3|SINE|B2 110455 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_112_1144_-0.405612384811906_9.95832569057835_8.80698015576827 chr2 57180510 57182654 + 8.80698015576827 NA promoter-TSS (NR_040633) promoter-TSS (NR_040633) 172 NR_040356 767815 Mm.188065 NR_040356 ENSMUSG00000084938 BB557941 - expressed sequence BB557941 ncRNA common_peak1_218_1575_0.304401723082538_10.7742526809976_8.80540822859499 chr1 127241409 127243993 + 8.80540822859499 NA intron (NM_145128, intron 1 of 17) MTE2a|LTR|ERVL-MaLR 37715 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_103_553_0.494903700964455_9.36119401653142_8.80462262065751 chr11 75453880 75455230 + 8.80462262065751 NA 5' UTR (NM_138950, exon 1 of 10) 5' UTR (NM_138950, exon 1 of 10) 162 NM_138950 192652 Mm.340378 NM_138950 ENSMUSG00000045374 Wdr81 BC054822|Gm883|mFLJ00182|nur5 WD repeat domain 81 protein-coding common_peak1_25_269_-0.9213943524099_7.61611842084588_8.80415188172418-2 chr4 141858843 141859428 + 8.80415188172418 NA 3' UTR (NM_025994, exon 4 of 4) 3' UTR (NM_025994, exon 4 of 4) -12776 NM_001033875 76701 Mm.489680 NM_001033875 ENSMUSG00000062478 Ctrc 1810044E12Rik chymotrypsin C (caldecrin) protein-coding common_peak1_25_269_-0.9213943524099_7.61611842084588_8.80415188172418 chr14 121314985 121315577 + 8.80415188172418 NA intron (NM_145465, intron 2 of 10) intron (NM_145465, intron 2 of 10) 63949 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_490_4618_0.18183710863476_12.2642833851664_8.80223355476594 chr14 121365094 121375276 + 8.80223355476594 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 9045 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_231_1704_0.292944224160101_10.8820281359916_8.8014643902032 chr2 30593592 30595759 + 8.8014643902032 NA promoter-TSS (NM_030137) promoter-TSS (NM_030137) -369 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding unique_peak2_15_178_-1.18756251413909_6.89003452019471_8.80022680809245 chr9 13443526 13444531 + 8.80022680809245 NA Intergenic Intergenic 12667 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA common_peak2_156_1632_-0.335833441156046_10.5053923549837_8.79837733741273 chr7 135603922 135606679 + 8.79837733741273 NA promoter-TSS (NM_001316679) promoter-TSS (NM_001316679) -528 NM_001316679 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak2_527_5078_0.173440433789507_12.3970489755116_8.79632105482295 chr8 122280503 122288008 + 8.79632105482295 NA intron (NM_009569, intron 1 of 9) CpG 2114 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_20_223_-1.02988027825911_7.29241478292805_8.7952686213098 chr3 96238555 96239035 + 8.7952686213098 NA TTS (NM_178212).2 TTS (NM_178212).2 332 NM_054045 97114 Mm.358797 NM_054045 ENSMUSG00000081058 Hist2h3c2 H3-614|H3.2-614|Hist2h3c2-ps|Hist2h3ca1|M32461 histone cluster 2, H3c2 protein-coding common_peak1_20_223_-1.02988027825911_7.29241478292805_8.7952686213098-2 chr6 120567393 120567790 + 8.7952686213098 NA intron (NR_045733, intron 2 of 3) intron (NR_045733, intron 2 of 3) 12795 NR_045733 73505 Mm.416867 NR_045733 1700072O05Rik - RIKEN cDNA 1700072O05 gene ncRNA common_peak2_145_899_0.395150146354949_10.0113562643945_8.79514015684605 chr13 65112022 65113551 + 8.79514015684605 NA 5' UTR (NM_133680, exon 1 of 12) 5' UTR (NM_133680, exon 1 of 12) 196 NM_001083901 66631 Mm.239196 NM_133680 ENSMUSG00000038212 Mfsd14b 5730414C17Rik|AU045608|AW539692|Hiatl1 major facilitator superfamily domain containing 14B protein-coding common_peak1_219_2368_-0.275546842481603_11.0722890619994_8.79493450097674 chr17 83731340 83733288 + 8.79493450097674 NA intron (NM_001171052, intron 3 of 15) intron (NM_001171052, intron 3 of 15) 26151 NM_001171052 116871 Mm.277668 NM_054082 ENSMUSG00000055817 Mta3 1110002J22Rik|mKIAA1266 metastasis associated 3 protein-coding common_peak2_60_247_0.710323140660098_8.30935788071692_8.79302687909884 chr5 64815381 64817194 + 8.79302687909884 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 12764 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_202_1420_0.319508584535258_10.6324451315104_8.79269649867625 chr6 31517199 31521105 + 8.79269649867625 NA TTS (NM_013723) TTS (NM_013723) 44785 NM_013723 27205 Mm.89918 NM_013723 ENSMUSG00000025608 Podxl AW121214|Ly102|PC|PCLP-1|Pclp1 podocalyxin-like protein-coding unique_peak2_19_213_-1.05033275877037_7.21630060701596_8.79248019515027 chr1 139453973 139455298 + 8.79248019515027 NA promoter-TSS (NM_009791) promoter-TSS (NM_009791) -138 NM_009791 12316 Mm.168523 NM_009791 ENSMUSG00000033952 Aspm Calmbp1|D330028K02Rik|MCPH5|Sha1 asp (abnormal spindle)-like, microcephaly associated (Drosophila) protein-coding common_peak1_74_340_0.616521779265494_8.72188881865692_8.79181462340536 chr18 70471709 70473159 + 8.79181462340536 NA promoter-TSS (NM_029019) promoter-TSS (NM_029019) -20 NM_029019 170461 Mm.83623 NM_029019 ENSMUSG00000079608 Stard6 1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424 StAR-related lipid transfer (START) domain containing 6 protein-coding common_peak1_110_1123_-0.410508152856231_9.92917224379281_8.79106979471825 chr17 5189411 5190386 + 8.79106979471825 NA intron (NM_001085355, intron 4 of 19) CpG 194824 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_71_714_-0.523889447420373_9.21985470795557_8.79044580716393 chr1 80729953 80731719 + 8.79044580716393 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 27717 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak1_31_324_-0.821430333604292_7.93358074111367_8.78856469343238 chr15 60168497 60169315 + 8.78856469343238 NA Intergenic L1VL2|LINE|L1 -152288 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_53_203_0.776394536054456_8.06062260999872_8.7869864007999 chr1 131279601 131280397 + 8.7869864007999 NA promoter-TSS (NM_019777) promoter-TSS (NM_019777) -436 NM_019777 56489 Mm.386783 NM_019777 ENSMUSG00000042349 Ikbke AW558201|IKK-i|IKKepsilon|Ikki inhibitor of kappaB kinase epsilon protein-coding common_peak1_283_2239_0.25710115127476_11.2578335925823_8.78632023259188 chr9 77909529 77911752 + 8.78632023259188 NA Intergenic CpG -6725 NM_134255 68801 Mm.430736 NM_134255 ENSMUSG00000032349 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) protein-coding common_peak2_270_2102_0.265234398615627_11.1708503340396_8.78612638928017 chr17 57288768 57292758 + 8.78612638928017 NA intron (NM_001163815, intron 2 of 27) intron (NM_001163815, intron 2 of 27) 11663 NM_001163815 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding common_peak1_106_576_0.486542910710291_9.41569896400063_8.78592522514735 chr13 74770208 74771383 + 8.78592522514735 NA promoter-TSS (NM_001301157) promoter-TSS (NM_001301157) -59 NM_001301155 12380 Mm.29163 NM_009817 ENSMUSG00000021585 Cast - calpastatin protein-coding common_peak1_153_1598_-0.33962037152091_10.4731440377199_8.78438605819145 chr3 103856979 103858401 + 8.78438605819145 NA Intergenic Lx8|LINE|L1 -2105 NR_104070 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding common_peak1_212_1517_0.309337986584834_10.7226250687079_8.78437908237811 chr9 114400389 114401860 + 8.78437908237811 NA promoter-TSS (NM_009752) promoter-TSS (NM_009752) 29 NM_001200002 100504715 Mm.290516 NM_001200002 ENSMUSG00000079260 Tmppe - transmembrane protein with metallophosphoesterase domain protein-coding common_peak2_64_273_0.678882437372369_8.43747330164671_8.78295846739476 chr11 120795656 120797146 + 8.78295846739476 NA promoter-TSS (NM_026824) promoter-TSS (NM_026824) -6 NM_026824 68730 Mm.180622 NM_026824 ENSMUSG00000025155 Dus1l 1110032N12Rik dihydrouridine synthase 1-like (S. cerevisiae) protein-coding common_peak2_449_4121_0.191767746090052_12.1050126625843_8.78188041036183 chr6 145338791 145342216 + 8.78188041036183 NA Intergenic B1F1|SINE|Alu -47122 NR_003625 381827 Mm.179075 NM_001001987 1700073E17Rik - ribosomal protein L7 pseudogene pseudo common_peak2_196_1363_0.325478687601127_10.5763672728247_8.78125207150909 chr7 100227069 100229719 + 8.78125207150909 NA intron (NM_027629, intron 1 of 13) intron (NM_027629, intron 1 of 13) 787 NM_027629 70974 Mm.440524 NM_027629 ENSMUSG00000030729 Pgm2l1 4931406N15Rik|AI553438|BM32A phosphoglucomutase 2-like 1 protein-coding common_peak2_64_644_-0.556240829977719_9.05503493532176_8.77831974054401 chr12 85444080 85445958 + 8.77831974054401 NA Intergenic Intergenic -28882 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak2_36_108_1.01159932643448_7.27398398799417_8.775003209495 chr10 61237725 61238584 + 8.775003209495 NA intron (NM_001081127, intron 4 of 21) intron (NM_001081127, intron 4 of 21) 35284 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak1_36_108_1.01159932643448_7.27398398799417_8.775003209495-2 chr4 62640764 62641512 + 8.775003209495 NA intron (NM_019492, intron 17 of 19) intron (NM_019492, intron 17 of 19) 21466 NM_134257 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_36_108_1.01159932643448_7.27398398799417_8.775003209495 chr13 100246743 100247342 + 8.775003209495 NA intron (NM_010870, intron 1 of 14) intron (NM_010870, intron 1 of 14) 294 NM_010870 17951 Mm.290476 NM_010870 ENSMUSG00000071203 Naip5 Birc1e|Lgn1|Naip-rs3 NLR family, apoptosis inhibitory protein 5 protein-coding common_peak1_52_197_0.786385145363503_8.02254919276136_8.7733931446442 chr5 64554173 64554951 + 8.7733931446442 NA Intergenic Intergenic 56137 NR_045078 100042198 Mm.25191 NR_045078 ENSMUSG00000105402 Gm3716 Gm1683 predicted gene 3716 ncRNA common_peak2_116_656_0.457328405438815_9.58841376304174_8.77088643507334 chr7 131409658 131411188 + 8.77088643507334 NA promoter-TSS (NM_175115) promoter-TSS (NM_175115) 55 NM_175115 67143 Mm.334273 NM_175115 ENSMUSG00000040167 Ikzf5 2610034F18Rik|PEGASUS|Zfpn1a5 IKAROS family zinc finger 5 protein-coding common_peak2_104_561_0.491153910455893_9.38000327544887_8.77074489309439 chr17 17234055 17235549 + 8.77074489309439 NA Intergenic Intergenic 113419 NM_011765 22759 Mm.436633 NM_011765 ENSMUSG00000095990 Zfp97 NGD16-4 zinc finger protein 97 protein-coding common_peak1_178_1195_0.345542911224664_10.3967731298104_8.76926960798306 chr7 119895070 119896601 + 8.76926960798306 NA promoter-TSS (NM_001163703) promoter-TSS (NM_001163703) -26 NM_001285961 73919 Mm.46381 NM_029610 ENSMUSG00000030922 Lyrm1 1110065L10Rik|2310004B22Rik|4930404J24Rik LYR motif containing 1 protein-coding common_peak1_168_1103_0.359289391751242_10.2881691526538_8.76819211592625 chr7 81522924 81524345 + 8.76819211592625 NA promoter-TSS (NR_045299) promoter-TSS (NR_045299) 84 NR_045299 100504421 Mm.217071 NR_045299 ENSMUSG00000097277 2900076A07Rik WI1-1616M8.2 RIKEN cDNA 2900076A07 gene ncRNA common_peak1_76_354_0.605046326381022_8.77419837758256_8.76588937724488 chr19 3282445 3283462 + 8.76588937724488 NA promoter-TSS (NM_009212) promoter-TSS (NM_009212) 57 NM_009212 20589 Mm.3179 NM_009212 ENSMUSG00000024831 Ighmbp2 AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|nmd|sma immunoglobulin mu binding protein 2 protein-coding common_peak2_59_594_-0.581477114411246_8.92600730098968_8.76581792154496 chr2 146855263 146856470 + 8.76581792154496 NA promoter-TSS (NM_001033298) promoter-TSS (NM_001033298) -23 NM_001033298 228730 Mm.292352 NM_001033298 ENSMUSG00000074749 Kiz Gm114|Ncrna00153|Plk1s1 kizuna centrosomal protein protein-coding common_peak1_81_389_0.580725262502172_8.8976929450007_8.76573861292022 chr4 129058117 129059060 + 8.76573861292022 NA exon (NM_029219, exon 1 of 9) exon (NM_029219, exon 1 of 9) 317 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding common_peak2_245_2683_-0.257978863795117_11.2611795243026_8.76560325080967 chr16 84582496 84585831 + 8.76560325080967 NA Intergenic Intergenic -95626 NR_040537 78023 Mm.243853 NR_040537 4930529L06Rik - RIKEN cDNA 4930529L06 gene ncRNA common_peak2_37_113_0.994086500418505_7.32993326437399_8.76413042351613 chr11 120258220 120259197 + 8.76413042351613 NA intron (NM_198423, intron 2 of 27) (TGG)n|Simple_repeat|Simple_repeat 25761 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak2_473_4412_0.185301886476969_12.2001949752145_8.76330593765712 chr7 73616870 73619775 + 8.76330593765712 NA Intergenic CpG -59927 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_32_333_-0.806384344813172_7.98051212006747_8.76245624603786 chr8 79711246 79711736 + 8.76245624603786 NA promoter-TSS (NM_026904) promoter-TSS (NM_026904) 249 NM_015751 24015 Mm.5831 NM_015751 ENSMUSG00000058355 Abce1 C79080|Oabp|RLI|RNS41|Rnaseli ATP-binding cassette, sub-family E (OABP), member 1 protein-coding common_peak2_298_2399_0.248647028672462_11.3531422048321_8.76179577438975 chr1 143915263 143920163 + 8.76179577438975 NA Intergenic Intergenic 86436 NM_009061 19735 Mm.28262 NM_009061 ENSMUSG00000026360 Rgs2 GOS8 regulator of G-protein signaling 2 protein-coding common_peak2_67_293_0.65708853851052_8.52821661409162_8.76171167296155 chr12 56345084 56346195 + 8.76171167296155 NA intron (NM_145442, intron 1 of 8) CpG 255 NM_145442 217588 Mm.25656 NM_145442 ENSMUSG00000021028 Mbip 4933408E06Rik MAP3K12 binding inhibitory protein 1 protein-coding common_peak1_151_1575_-0.341850682500418_10.4511264782062_8.76000109960128 chr11 97824516 97825415 + 8.76000109960128 NA intron (NM_010688, intron 4 of 6) intron (NM_010688, intron 4 of 6) -15815 NM_001080935 68127 Mm.110270 NM_001080935 ENSMUSG00000050538 B230217C12Rik AI840637 RIKEN cDNA B230217C12 gene protein-coding common_peak1_155_987_0.377800840395896_10.1372676517826_8.75955849343755 chr7 90355808 90357614 + 8.75955849343755 NA intron (NM_001289583, intron 2 of 19) intron (NM_001289583, intron 2 of 19) -30270 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_22_241_-0.980402433181085_7.42866202068405_8.75948073668604 chr17 83646119 83646686 + 8.75948073668604 NA Intergenic Intergenic -14507 NM_153512 225030 Mm.223506 NM_153512 ENSMUSG00000045053 Kcng3 KV6.3|Kv10.1a|Kv10.1b potassium voltage-gated channel, subfamily G, member 3 protein-coding common_peak1_218_2355_-0.275670281291546_11.0642886831847_8.75942414549274 chr11 115127107 115129531 + 8.75942414549274 NA intron (NM_145634, intron 1 of 6) RSINE1|SINE|B4 5673 NM_001169153 246746 Mm.277387 NM_145634 ENSMUSG00000047798 Cd300lf CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3 CD300 molecule like family member F protein-coding common_peak1_90_910_-0.458962201082004_9.60182614326105_8.7580688332359 chr15 94589037 94589897 + 8.7580688332359 NA intron (NM_008971, intron 1 of 8) CpG 357 NM_008971 19230 Mm.490250 NM_008971 ENSMUSG00000022451 Twf1 A6|Ptk9|twinfilin twinfilin actin binding protein 1 protein-coding common_peak2_32_88_1.10158651669448_7.02652668931364_8.75667436611192 chr10 61236939 61237718 + 8.75667436611192 NA intron (NM_001081127, intron 4 of 21) G-rich|Low_complexity|Low_complexity 36110 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak2_70_313_0.638538796955389_8.61389014736932_8.75665291776621 chr9 63730050 63731992 + 8.75665291776621 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 26973 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_66_663_-0.544495731197202_9.10279156574832_8.75328358999321 chr11 98471663 98472361 + 8.75328358999321 NA intron (NM_011771, intron 7 of 7) intron (NM_011771, intron 7 of 7) 25178 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding unique_peak1_22_44_1.44660770776384_6.21515695021159_8.74963506234058 chr12 100504661 100505160 + 8.74963506234058 NA intron (NM_001033213, intron 1 of 19) intron (NM_001033213, intron 1 of 19) 15912 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak1_62_623_-0.563793058910466_9.00350568940702_8.74875932182226 chr2 167649485 167650383 + 8.74875932182226 NA intron (NM_145538, intron 2 of 5) B4A|SINE|B4 11610 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding common_peak1_706_7415_0.143958774245396_12.9284049157482_8.7467091140598 chr6 108656800 108660482 + 8.7467091140598 NA intron (NR_104577, intron 1 of 6) intron (NR_104577, intron 1 of 6) -1988 NM_011498 20893 Mm.2436 NM_011498 ENSMUSG00000030103 Bhlhe40 Bhlhb2|C130042M06Rik|CR8|Clast5|Dec1|Sharp2|Stra13|Stra14 basic helix-loop-helix family, member e40 protein-coding common_peak2_105_1068_-0.419692061091022_9.85220010717498_8.74656483689745 chr11 116405024 116407620 + 8.74656483689745 NA intron (NM_027258, intron 1 of 18) L1MB7|LINE|L1 6710 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_24_52_1.35809473757319_6.40696782334979_8.74645892627975-2 chr18 11935190 11935765 + 8.74645892627975 NA intron (NM_022021, intron 6 of 8) intron (NM_022021, intron 6 of 8) -95039 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA common_peak1_24_52_1.35809473757319_6.40696782334979_8.74645892627975 chr17 56761822 56762273 + 8.74645892627975 NA Intergenic CpG -2704 NM_144858 224907 Mm.293973 NM_144858 ENSMUSG00000007603 Dus3l AI662135|AW557805 dihydrouridine synthase 3-like (S. cerevisiae) protein-coding common_peak2_94_485_0.523657286669431_9.1866411469405_8.74641830405569 chr4 32117259 32119167 + 8.74641830405569 NA Intergenic MTC-int|LTR|ERVL-MaLR 154106 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding unique_peak2_18_204_-1.07911589610856_7.13992215145117_8.74395589548456 chr17 12691182 12692606 + 8.74395589548456 NA exon (NM_010515, exon 40 of 48) exon (NM_010515, exon 40 of 48) -16056 NM_009202 20517 Mm.594 NM_009202 ENSMUSG00000023829 Slc22a1 Lx1|Oct1|Orct|Orct1 solute carrier family 22 (organic cation transporter), member 1 protein-coding common_peak1_33_342_-0.791916194012286_8.02610666916667_8.7412332927919 chr2 129178188 129178993 + 8.7412332927919 NA non-coding (NR_045264, exon 3 of 3) non-coding (NR_045264, exon 3 of 3) 2083 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 OTTMUSG00000015420 expressed sequence AI847159 ncRNA unique_peak2_7_106_-1.67182603446233_5.90555396916998_8.74000929117036 chr12 99627577 99628561 + 8.74000929117036 NA promoter-TSS (NR_045288) promoter-TSS (NR_045288) -95 NR_045288 73457 Mm.383439 NR_045288 ENSMUSG00000100211 1700064M15Rik - RIKEN cDNA 1700064M15 gene ncRNA common_peak1_50_505_-0.635322797566854_8.66533217591088_8.73958919990843 chr10 128526147 128527000 + 8.73958919990843 NA promoter-TSS (NM_011843) promoter-TSS (NM_011843) -714 NM_011843 23943 Mm.66056 NM_011843 ENSMUSG00000025366 Esyt1 Fam62a|Mbc2|vp115 extended synaptotagmin-like protein 1 protein-coding common_peak2_105_569_0.487535967577363_9.39858609284079_8.73803909322004 chr4 14863418 14865256 + 8.73803909322004 NA exon (NM_028264, exon 1 of 7) exon (NM_028264, exon 1 of 7) 118 NM_028264 72519 Mm.279158 NM_028264 ENSMUSG00000028221 Tmem55a 2610319K07Rik|AI315591|AV001360 transmembrane protein 55A protein-coding common_peak2_57_228_0.736071837601981_8.20723970689793_8.73792699012182 chr16 38131062 38132605 + 8.73792699012182 NA intron (NM_019827, intron 1 of 10) intron (NM_019827, intron 1 of 10) -42573 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA common_peak2_57_228_0.736071837601981_8.20723970689793_8.73792699012182-2 chr5 146655010 146656254 + 8.73792699012182 NA Intergenic Intergenic -70393 NM_001010941 14738 Mm.153539 NM_008151 ENSMUSG00000041468 Gpr12 Gpcr01|Gpcr12|Gpcr20|Gpcr21 G-protein coupled receptor 12 protein-coding common_peak2_62_260_0.693703163381898_8.37475757826083_8.73746830101938 chr15 76924854 76926250 + 8.73746830101938 NA promoter-TSS (NM_001168276) promoter-TSS (NM_001168276) -104 NM_001168276 239546 Mm.183650 NM_172817 ENSMUSG00000054967 Zfp647 6030449J21|Es492|Znf250 zinc finger protein 647 protein-coding common_peak1_182_1232_0.340696882797417_10.4383055258015_8.73600819728579 chr2 25556795 25558714 + 8.73600819728579 NA promoter-TSS (NM_021519) promoter-TSS (NM_021519) -146 NM_021519 59022 Mm.29945 NM_021519 ENSMUSG00000015092 Edf1 0610008L11Rik|AA409425 endothelial differentiation-related factor 1 protein-coding common_peak2_58_235_0.722883355679984_8.24408472720183_8.73591081979798 chr10 108092266 108093595 + 8.73591081979798 NA Intergenic Intergenic -69470 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak1_58_235_0.722883355679984_8.24408472720183_8.73591081979798 chr5 113898840 113899911 + 8.73591081979798 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 9331 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak2_323_3661_-0.218849370431746_11.7289913905815_8.73582136220985 chr2 23067205 23070268 + 8.73582136220985 NA promoter-TSS (NM_001102438) promoter-TSS (NM_001102438) -336 NM_001102437 74159 Mm.181973 NM_028793 ENSMUSG00000026781 Acbd5 1300014E15Rik acyl-Coenzyme A binding domain containing 5 protein-coding common_peak1_243_2657_-0.258381315856491_11.2469347313479_8.73396667056327 chr8 72352294 72354558 + 8.73396667056327 NA intron (NM_007944, intron 22 of 23) intron (NM_007944, intron 22 of 23) 34364 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding unique_peak2_27_286_-0.878342176657762_7.72573583834681_8.7277678450474 chr12 32168168 32169684 + 8.7277678450474 NA Intergenic Intergenic 39412 NM_001146201 30955 Mm.101369 NM_020272 ENSMUSG00000020573 Pik3cg 5830428L06Rik|PI3Kgamma|p110gamma phosphoinositide-3-kinase, catalytic, gamma polypeptide protein-coding common_peak1_228_2475_-0.268327704456091_11.1396317469862_8.72678753207706 chr10 96355939 96358555 + 8.72678753207706 NA Intergenic Intergenic 131040 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_146_1518_-0.347895401438116_10.394958453783_8.72646740599338 chr3 131110322 131114259 + 8.72646740599338 NA promoter-TSS (NM_001276403) promoter-TSS (NM_001276403) -501 NM_001276403 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_126_739_0.430829233657732_9.74679607734518_8.71836799996158 chr4 129792817 129795288 + 8.71836799996158 NA Intergenic Intergenic -26427 NM_008974 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding common_peak1_40_129_0.939075452036971_7.49190553904694_8.71817807361901 chr7 29816027 29816448 + 8.71817807361901 NA 5' UTR (NM_001145880, exon 1 of 5) 5' UTR (NM_001145880, exon 1 of 5) 165 NM_001145880 233056 Mm.224766 NM_146185 ENSMUSG00000011427 Zfp790 6330581L23Rik zinc finger protein 790 protein-coding common_peak1_23_249_-0.952008816569992_7.48977987637709_8.71817807361896-2 chr7 16387486 16387951 + 8.71817807361896 NA exon (NM_019748, exon 1 of 9) exon (NM_019748, exon 1 of 9) 178 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding common_peak1_23_249_-0.952008816569992_7.48977987637709_8.71817807361896 chr19 5815255 5815739 + 8.71817807361896 NA Intergenic YREP_Mm|Unknown|Unknown -12826 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak1_33_93_1.07555972048289_7.09236871191908_8.71652082628253 chr15 6557201 6557809 + 8.71652082628253 NA Intergenic Intergenic -22342 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_46_466_-0.664147652283644_8.53520491356784_8.71646478464594 chr9 57836353 57836918 + 8.71646478464594 NA Intergenic CpG -2401 NM_019689 56380 Mm.425588 NM_019689 ENSMUSG00000004661 Arid3b Bdp|Dri2 AT rich interactive domain 3B (BRIGHT-like) protein-coding common_peak1_43_437_-0.688377005720866_8.43059855674074_8.71624603000874 chr13 23575667 23576283 + 8.71624603000874 NA exon (NM_178204, exon 1 of 1) exon (NM_178204, exon 1 of 1) 212 NM_178204 319149 Mm.347699 NM_178204 ENSMUSG00000099583 Hist1h3d H3-b histone cluster 1, H3d protein-coding common_peak1_174_1836_-0.313584609709496_10.6863436062566_8.71528535744991 chr4 46388617 46390359 + 8.71528535744991 NA promoter-TSS (NM_029086) promoter-TSS (NM_029086) -65 NM_029086 74753 Mm.45973 NM_029086 ENSMUSG00000028331 Trmo 5830415F09Rik|AV014846|Nap1 tRNA methyltransferase O protein-coding common_peak1_99_523_0.505816812971645_9.28633140802327_8.71471076832616 chr5 31526442 31527681 + 8.71471076832616 NA promoter-TSS (NM_009206) promoter-TSS (NM_009206) 66 NM_009206 20534 Mm.352407 NM_009206 ENSMUSG00000029141 Slc4a1ap kanadaptin solute carrier family 4 (anion exchanger), member 1, adaptor protein protein-coding common_peak2_146_909_0.39128801797791_10.025366744075_8.71385645771196 chr3 105686759 105688554 + 8.71385645771196 NA promoter-TSS (NM_017397) promoter-TSS (NM_017397) -85 NM_017397 53975 Mm.272826 NM_017397 ENSMUSG00000027905 Ddx20 GEMIN3|dp103 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 protein-coding common_peak1_12_150_-1.3095958058705_6.58360683638983_8.71356980695976 chr10 21160509 21160920 + 8.71356980695976 NA exon (NM_010848, exon 1 of 15) exon (NM_010848, exon 1 of 15) 270 NM_001198914 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding common_peak2_154_979_0.378149852610056_10.1257128653076_8.71275181924258 chr8 94433360 94436720 + 8.71275181924258 NA promoter-TSS (NR_015514) promoter-TSS (NR_015514) 63 NR_015514 320377 Mm.486022 NR_015514 9330175E14Rik A630085K21 RIKEN cDNA 9330175E14 gene ncRNA unique_peak1_18_29_1.69347360778837_5.7536273995027_8.71052092740815 chr13 92636220 92636683 + 8.71052092740815 NA intron (NM_172588, intron 1 of 11) intron (NM_172588, intron 1 of 11) 25313 NM_172588 218442 Mm.297970 NM_172588 ENSMUSG00000021703 Serinc5 A130038L21Rik|AIGP3|C86123|TPO1 serine incorporator 5 protein-coding unique_peak2_6_97_-1.78136971646999_5.72402498588021_8.71052092740815-2 chr5 73491018 73491546 + 8.71052092740815 NA intron (NM_178896, intron 1 of 10) CpG 256 NM_001190733 100737 Mm.220312 NM_178896 ENSMUSG00000051674 Dcun1d4 AI836376 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) protein-coding common_peak1_18_29_1.69347360778837_5.7536273995027_8.71052092740815-2 chr11 117993184 117993589 + 8.71052092740815 NA intron (NM_133757, intron 1 of 9) intron (NM_133757, intron 1 of 9) 6529 NM_133757 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding unique_peak1_18_29_1.69347360778837_5.7536273995027_8.71052092740815-2 chr15 83451920 83452340 + 8.71052092740815 NA intron (NM_001159509, intron 1 of 10) intron (NM_001159509, intron 1 of 10) 12476 NM_001159509 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_18_29_1.69347360778837_5.7536273995027_8.71052092740815-4 chr2 158725014 158725325 + 8.71052092740815 NA intron (NM_153089, intron 2 of 10) intron (NM_153089, intron 2 of 10) -42930 NM_027975 71878 Mm.85162 NM_027975 ENSMUSG00000027654 Fam83d 2310007D09Rik|BB104611 family with sequence similarity 83, member D protein-coding common_peak1_18_29_1.69347360778837_5.7536273995027_8.71052092740815 chr1 91024830 91025263 + 8.71052092740815 NA intron (NM_001111312, intron 1 of 12) ORR1D2|LTR|ERVL-MaLR 26319 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_6_97_-1.78136971646999_5.72402498588021_8.71052092740815 chr4 133101122 133101663 + 8.71052092740815 NA Intergenic RLTR4_Mm|LTR|ERV1 -29241 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak1_18_29_1.69347360778837_5.7536273995027_8.71052092740815-3 chr16 91476783 91477216 + 8.71052092740815 NA Intergenic Intergenic -8216 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 CD118|Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding common_peak1_86_867_-0.468753401778626_9.52717453155516_8.70935649619169 chr11 3913433 3914735 + 8.70935649619169 NA 5' UTR (NM_153142, exon 1 of 2) 5' UTR (NM_153142, exon 1 of 2) 580 NM_153142 103710 Mm.171514 NM_153142 ENSMUSG00000048807 Slc35e4 A330108F03Rik|AI414849|AI536442 solute carrier family 35, member E4 protein-coding common_peak2_503_4782_0.177746017524543_12.3125730847486_8.70896468921678 chr6 87037352 87043510 + 8.70896468921678 NA Intergenic Intergenic -2415 NM_013528 14583 Mm.19893 NM_013528 ENSMUSG00000029992 Gfpt1 2810423A18Rik|AI324119|AI449986|GFA|GFAT|GFAT1|GFAT1m|Gfpt glutamine fructose-6-phosphate transaminase 1 protein-coding common_peak1_60_603_-0.573885288278106_8.95146209518603_8.70701774043077 chr4 134918014 134919091 + 8.70701774043077 NA Intergenic RMER6B|LTR|ERVK -3636 NM_027935 71817 Mm.88349 NM_027935 ENSMUSG00000028822 Tmem50a 3200001F09Rik|CAM|Smp1 transmembrane protein 50A protein-coding common_peak1_17_195_-1.11002448224254_7.05969760299394_8.70443919756687 chr9 104002682 104003095 + 8.70443919756687 NA exon (NM_028721, exon 1 of 27) exon (NM_028721, exon 1 of 27) 344 NM_028721 74025 Mm.479273 NM_028721 ENSMUSG00000032558 Nphp3 3632410F03Rik|AI550417|C230078J01|D330020E01Rik|pcy nephronophthisis 3 (adolescent) protein-coding common_peak2_525_5056_0.172987267334531_12.3905596967945_8.70419924397022 chr4 40850062 40855096 + 8.70419924397022 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) 1958 NM_022305 14595 Mm.15622 NM_022305 ENSMUSG00000028413 B4galt1 B-1,4-GalT|B-1,4-GalT1|GalT|Ggtb|Ggtb2|b4Gal-T1|beta-1,4-GalT|beta-1,4-GalT1|beta4Gal-T1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 protein-coding common_peak2_281_2220_0.256884237218676_11.2454357961563_8.70382180415189 chr8 117032118 117035552 + 8.70382180415189 NA intron (NM_029686, intron 26 of 42) ID_B1|SINE|B4 -40386 NM_026572 68133 Mm.258462 NM_026572 ENSMUSG00000034424 Gcsh 1100001L02Rik|5730591C18Rik glycine cleavage system protein H (aminomethyl carrier) protein-coding common_peak1_134_1383_-0.36431507391881_10.2524706906773_8.70367602243281 chr9 96350183 96351934 + 8.70367602243281 NA intron (NM_007502, intron 1 of 6) intron (NM_007502, intron 1 of 6) 13241 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak2_63_632_-0.556583803930462_9.02776978746311_8.69527798083324 chr9 45281636 45283763 + 8.69527798083324 NA Intergenic Intergenic -13553 NM_008348 16154 Mm.379327 NM_008348 ENSMUSG00000032089 Il10ra AW553859|CDw210|CDw210a|IL-10R1|IL-10RA|Il10r|mIL-10R interleukin 10 receptor, alpha protein-coding common_peak2_149_1550_-0.342220951560066_10.4278724952561_8.69390875180194 chr6 129639089 129646123 + 8.69390875180194 NA intron (NM_021378, intron 2 of 4) intron (NM_021378, intron 2 of 4) 682 NM_021378 58179 Mm.358684 NM_021378 ENSMUSG00000033027 Klrc3 Klrc2|Nkg2e killer cell lectin-like receptor subfamily C, member 3 protein-coding unique_peak1_21_40_1.50224573807587_6.10867487365602_8.69379837939004 chr1 136127917 136128460 + 8.69379837939004 NA intron (NR_046167, intron 3 of 3) intron (NR_046167, intron 3 of 3) 2995 NR_046168 329253 Mm.487858 NR_046167 ENSMUSG00000086264 Gm15850 6530439I21|OTTMUSG00000026868 predicted gene 15850 ncRNA unique_peak1_21_40_1.50224573807587_6.10867487365602_8.69379837939004-3 chr4 32564801 32565264 + 8.69379837939004 NA intron (NM_001109661, intron 3 of 4) intron (NM_001109661, intron 3 of 4) 6630 NR_026843 414068 Mm.389550 NR_026843 ENSMUSG00000086150 Bach2os - BTB and CNC homology 2, opposite strand ncRNA unique_peak1_21_40_1.50224573807587_6.10867487365602_8.69379837939004-2 chr12 111162206 111162632 + 8.69379837939004 NA intron (NR_130987, intron 2 of 3) intron (NR_130987, intron 2 of 3) -3951 NM_001286122 22031 Mm.27431 NM_011632 ENSMUSG00000021277 Traf3 AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn TNF receptor-associated factor 3 protein-coding common_peak1_74_341_0.612297193403769_8.72400111158778_8.68869926160654 chr8 86864170 86865257 + 8.68869926160654 NA intron (NM_030563, intron 1 of 6) (TC)n|Simple_repeat|Simple_repeat 20545 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_52_523_-0.617681236094338_8.72458238349028_8.68869926160654 chr1 21352218 21353221 + 8.68869926160654 NA TTS (NM_183322) TTS (NM_183322) 3042 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_45_157_0.861292367102762_7.73442693172848_8.68865913048598 chr2 69717547 69718413 + 8.68865913048598 NA Intergenic Intergenic -5108 NM_001081086 228005 Mm.11815 NM_001081086 ENSMUSG00000042133 Ppig AU019516|AU022200|B230312B02Rik|CYP|SRCyp peptidyl-prolyl isomerase G (cyclophilin G) protein-coding common_peak1_34_98_1.05208909444392_7.15540116730157_8.68569917994604 chr4 142077031 142077587 + 8.68569917994604 NA intron (NM_145402, intron 1 of 2) intron (NM_145402, intron 1 of 2) -6989 NR_027137 100038693 Mm.402714 NR_027137 ENSMUSG00000073728 Tmem51os1 ENSMUSG00000073728|Gm10565|Tmem51as1 Tmem51 opposite strand 1 ncRNA common_peak2_41_135_0.916624113734516_7.5457748981176_8.68452146689404 chr1 195091700 195092607 + 8.68452146689404 NA promoter-TSS (NM_010778) promoter-TSS (NM_010778) 95 NR_132621 17221 Mm.12884 NM_010778 ENSMUSG00000016493 Cd46 Mcp CD46 antigen, complement regulatory protein protein-coding common_peak1_41_135_0.916624113734516_7.5457748981176_8.68452146689404-2 chr7 97696659 97697233 + 8.68452146689404 NA intron (NM_023671, intron 1 of 6) CpG 289 NM_023671 12729 Mm.21482 NM_023671 ENSMUSG00000025439 Clns1a 2610036D06Rik|2610100O04Rik|Clci|Clcni|ICLN chloride channel, nucleotide-sensitive, 1A protein-coding common_peak1_41_135_0.916624113734516_7.5457748981176_8.68452146689404 chr1 170968881 170969861 + 8.68452146689404 NA intron (NM_001077189, intron 2 of 7) intron (NM_001077189, intron 2 of 7) 6700 NM_001077189 14130 Mm.425062 NM_010187 ENSMUSG00000026656 Fcgr2b AI528646|CD32|F630109E10Rik|Fc[g]RII|FcgRII|Fcgr2|Fcgr2a|Fcr-2|Fcr-3|Ly-17|Ly-m20|LyM-1|Lym-1|fcRII Fc receptor, IgG, low affinity IIb protein-coding common_peak1_142_1472_-0.352351368453421_10.3483660308091_8.68365898481824 chr2 165325425 165326607 + 8.68365898481824 NA intron (NM_080287, intron 1 of 20) L2c|LINE|L2 463 NM_080287 140579 Mm.35064 NM_080287 ENSMUSG00000017670 Elmo2 1190002F24Rik|CED-12 engulfment and cell motility 2 protein-coding common_peak1_123_1262_-0.382732096680535_10.1112728754473_8.68105487499748 chr19 8722298 8723405 + 8.68105487499748 NA promoter-TSS (NR_002896) promoter-TSS (NR_002896) 518 NM_001161413 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak2_28_295_-0.860790051116381_7.77905834007076_8.68045331539849 chr13 49652948 49653776 + 8.68045331539849 NA promoter-TSS (NM_025495) promoter-TSS (NM_025495) 284 NR_073167 70930 Mm.258915 NM_001081350 ENSMUSG00000021392 Nol8 4921532D18Rik|5730412B09Rik nucleolar protein 8 protein-coding common_peak1_176_1178_0.346312918215347_10.3765044620874_8.67943851167074 chr16 16983021 16984324 + 8.67943851167074 NA exon (NM_001038663, exon 1 of 8) exon (NM_001038663, exon 1 of 8) 290 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak1_43_146_0.886737709043943_7.64304119935834_8.6781412430732 chr9 120049668 120050441 + 8.6781412430732 NA 3' UTR (NM_009987, exon 2 of 2) 3' UTR (NM_009987, exon 2 of 2) 18242 NM_009987 13051 Mm.44065 NM_009987 ENSMUSG00000052336 Cx3cr1 - chemokine (C-X3-C motif) receptor 1 protein-coding common_peak1_115_1175_-0.397784407951082_10.0007801408608_8.67740189586225 chr17 14978123 14979339 + 8.67740189586225 NA promoter-TSS (NM_001123368).3 promoter-TSS (NM_001123368).3 81 NM_001123368 100041586 Mm.440445 NM_001123368 ENSMUSG00000079710 Gm3417 - predicted gene 3417 protein-coding common_peak1_110_1121_-0.407938793244098_9.92788756398674_8.67707435535861-2 chr4 129555695 129557482 + 8.67707435535861 NA intron (NM_001162433, intron 6 of 12) intron (NM_001162433, intron 6 of 12) 1223 NR_106199 102465997 NR_106199 ENSMUSG00000099070 Mir8119 Gm27567|mmu-mir-8119 microRNA 8119 ncRNA common_peak1_110_1121_-0.407938793244098_9.92788756398674_8.67707435535861 chr4 44166955 44168045 + 8.67707435535861 NA promoter-TSS (NM_175201) promoter-TSS (NM_175201) 38 NM_175201 73469 Mm.262859 NM_175201 ENSMUSG00000035696 Rnf38 1700065B19Rik|2610202O07Rik|AA673263|Oip1 ring finger protein 38 protein-coding common_peak1_16_186_-1.14335819891346_6.9752153604309_8.67549730388629 chr11 119924661 119925294 + 8.67549730388629 NA intron (NR_039557, intron 2 of 2) RSINE1|SINE|B4 11167 NM_001085498 208092 Mm.306673 NM_001085498 ENSMUSG00000025371 Chmp6 2400004G01Rik charged multivesicular body protein 6 protein-coding common_peak1_16_186_-1.14335819891346_6.9752153604309_8.67549730388629-2 chr5 122233958 122234327 + 8.67549730388629 NA intron (NM_028752, intron 3 of 6) L1MB5|LINE|L1 23855 NM_028752 74096 Mm.28804 NM_028752 ENSMUSG00000064267 Hvcn1 0610039P13Rik|AI450555|BTS|HV1|Vsop.|mVSOP hydrogen voltage-gated channel 1 protein-coding unique_peak2_36_370_-0.755491725409392_8.15752951391611_8.67366825422139 chr2 18178258 18179998 + 8.67366825422139 NA intron (NR_045538, intron 13 of 22) intron (NR_045538, intron 13 of 22) 114543 NM_001252561 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding common_peak1_87_877_-0.465054764468695_9.54554974730101_8.67248427059531 chr6 86546814 86548084 + 8.67248427059531 NA intron (NR_037960, intron 3 of 4) intron (NR_037960, intron 3 of 4) 20048 NR_037961 72012 Mm.349174 NR_037960 ENSMUSG00000097048 1600020E01Rik - RIKEN cDNA 1600020E01 gene ncRNA common_peak2_60_248_0.704517518978892_8.31226069155753_8.6723862330793 chr1 181226648 181228491 + 8.6723862330793 NA Intergenic Intergenic -15591 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding unique_peak2_2_59_-2.57295206107549_4.62041456507077_8.67178112249457 chr7 45814735 45815228 + 8.67178112249457 NA promoter-TSS (NM_001112701) promoter-TSS (NM_001112701) -665 NM_001112701 19158 Mm.272130 NM_011181 ENSMUSG00000003269 Cyth2 ARNO|CLM2|Pscd2 cytohesin 2 protein-coding common_peak2_57_572_-0.587115703057981_8.86883347722792_8.67002575713365 chr7 126565480 126567056 + 8.67002575713365 NA promoter-TSS (NM_146200) promoter-TSS (NM_146200) 98 NM_146200 56347 Mm.22776 NM_146200 ENSMUSG00000030738 Eif3c 110kDa|3230401O13Rik|Eif3s8|NIPIL(A3)|NipilA3|Xs|Xsl eukaryotic translation initiation factor 3, subunit C protein-coding common_peak1_57_572_-0.587115703057981_8.86883347722792_8.67002575713365 chr11 106193685 106194432 + 8.67002575713365 NA promoter-TSS (NM_001252449) promoter-TSS (NM_001252449) -455 NM_001252449 72149 Mm.403722 NM_028126 ENSMUSG00000069631 Strada 2610019A05Rik|6030402H20Rik|AI480680|E130112C09Rik STE20-related kinase adaptor alpha protein-coding common_peak1_20_222_-1.02342525612181_7.2891872718594_8.66870046181224-2 chr3 115682477 115683004 + 8.66870046181224 NA Intergenic Intergenic 32315 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding common_peak1_20_222_-1.02342525612181_7.2891872718594_8.66870046181224-5 chr7 63919754 63920221 + 8.66870046181224 NA exon (NM_001256311, exon 3 of 3) exon (NM_001256311, exon 3 of 3) 3130 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak1_20_222_-1.02342525612181_7.2891872718594_8.66870046181224 chr12 17377250 17377827 + 8.66870046181224 NA intron (NM_001008421, intron 12 of 20) intron (NM_001008421, intron 12 of 20) 22146 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA common_peak1_20_222_-1.02342525612181_7.2891872718594_8.66870046181224-4 chr7 45017958 45018410 + 8.66870046181224 NA intron (NM_009101, intron 1 of 5) intron (NM_009101, intron 1 of 5) 177 NM_009101 20130 Mm.389894 NM_009101 ENSMUSG00000038387 Rras AI573426 related RAS viral (r-ras) oncogene protein-coding common_peak1_20_222_-1.02342525612181_7.2891872718594_8.66870046181224-3 chr6 50427088 50427590 + 8.66870046181224 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 28831 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_106_1077_-0.415171043396732_9.86655594105414_8.66536046874514 chr9 72984755 72986859 + 8.66536046874514 NA promoter-TSS (NM_001198789) promoter-TSS (NM_001198789) 303 NM_028181 72278 Mm.268475 NM_028181 ENSMUSG00000034563 Ccpg1 1700030B06Rik|1810073J13Rik|9430028F23Rik|AI426686|AI875170|CPR8|D9Ertd392e cell cycle progression 1 protein-coding common_peak2_184_1252_0.336718538767871_10.4595299687058_8.66414417886454 chr2 25556687 25558863 + 8.66414417886454 NA promoter-TSS (NM_021519) promoter-TSS (NM_021519) -125 NM_021519 59022 Mm.29945 NM_021519 ENSMUSG00000015092 Edf1 0610008L11Rik|AA409425 endothelial differentiation-related factor 1 protein-coding common_peak1_107_586_0.478215496102255_9.43632444116118_8.66392995516063 chr16 92809749 92811854 + 8.66392995516063 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 15273 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_4_78_-2.06587114291904_5.27084517671758_8.66377877920561-3 chrY 10643408 10644027 + 8.66377877920561 NA Intergenic CpG 554131 NM_001199331 100040022 Mm.485767 NM_001199331 ENSMUSG00000095172 Gm20822 - predicted gene, 20822 protein-coding unique_peak2_4_78_-2.06587114291904_5.27084517671758_8.66377877920561-2 chr8 122181785 122182524 + 8.66377877920561 NA Intergenic ORR1E|LTR|ERVL-MaLR -99987 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding unique_peak2_4_78_-2.06587114291904_5.27084517671758_8.66377877920561 chr3 69721443 69721881 + 8.66377877920561 NA promoter-TSS (NM_133787) promoter-TSS (NM_133787) -393 NM_133787 97112 Mm.21062 NM_133787 ENSMUSG00000027787 Nmd3 C87860 NMD3 ribosome export adaptor protein-coding common_peak1_19_212_-1.04357539259506_7.21292192392831_8.66309084762192 chr2 103656281 103656857 + 8.66309084762192 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 90259 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak1_35_103_1.03085795491793_7.21586869560006_8.66309084762192 chr11 117964483 117965131 + 8.66309084762192 NA Intergenic Intergenic 4559 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_91_919_-0.453804624478153_9.6185877387053_8.66160373535378 chr4 132269981 132270724 + 8.66160373535378 NA promoter-TSS (NR_002865) promoter-TSS (NR_002865) -166 NR_002865 353373 Mm.424675 NR_002865 Rnu11 MBII-407|Mirn801|mir-801|mmu-mir-801 U11 small nuclear RNA snRNA common_peak1_93_940_-0.448307514116161_9.65389715567046_8.66018274192458 chr11 29547370 29548646 + 8.66018274192458 NA promoter-TSS (NM_028504) promoter-TSS (NM_028504) 32 NM_024277 78294 Mm.180003 NM_024277 ENSMUSG00000020460 Rps27a 0610006J14Rik|Uba52|Ubb|Ubc ribosomal protein S27A protein-coding common_peak2_32_332_-0.802058419410382_7.97834915736607_8.65855138439772 chrX 7883300 7884889 + 8.65855138439772 NA promoter-TSS (NM_078484) promoter-TSS (NM_078484) -150 NM_001083937 22232 Mm.214976 NM_078484 ENSMUSG00000031156 Slc35a2 AI327289|Had-1|Had1|Sfc8|UGT|Ugalt solute carrier family 35 (UDP-galactose transporter), member A2 protein-coding common_peak1_32_332_-0.802058419410382_7.97834915736607_8.65855138439772 chr7 127244477 127245092 + 8.65855138439772 NA intron (NM_177362, intron 1 of 2) intron (NM_177362, intron 1 of 2) 258 NM_177362 244216 Mm.41038 NM_177362 ENSMUSG00000054716 Zfp771 G630024C07Rik|Znf771 zinc finger protein 771 protein-coding unique_peak1_23_48_1.39906562397689_6.31424265610365_8.6577231047802 chr13 43212370 43212927 + 8.6577231047802 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -41147 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding unique_peak1_23_48_1.39906562397689_6.31424265610365_8.6577231047802-2 chr14 50824120 50824661 + 8.6577231047802 NA intron (NM_009351, intron 54 of 54) intron (NM_009351, intron 54 of 54) 16444 NM_009632 11546 Mm.281482 NM_009632 ENSMUSG00000036023 Parp2 ARTD2|Adprt2|Adprtl2|Aspartl2|C78626|PARP-2 poly (ADP-ribose) polymerase family, member 2 protein-coding common_peak2_195_2080_-0.292960390451938_10.8765810545094_8.65639647650477 chr5 33656649 33659293 + 8.65639647650477 NA promoter-TSS (NM_001040435) promoter-TSS (NM_001040435) -139 NM_026698 68366 Mm.491151 NM_026698 ENSMUSG00000019295 Tmem129 0610039G24Rik|2410015J15Rik|AA409575 transmembrane protein 129 protein-coding common_peak2_50_504_-0.632468800511701_8.66390517738331_8.65503771532026 chr13 97207681 97209229 + 8.65503771532026 NA Intergenic RMER10B|LTR|ERVL -10098 NM_010422 15212 Mm.27816 NM_010422 ENSMUSG00000021665 Hexb - hexosaminidase B protein-coding common_peak1_163_1060_0.363458946523373_10.2329384141765_8.65307916543633 chr5 110447578 110449183 + 8.65307916543633 NA 5' UTR (NM_001142642, exon 1 of 19) 5' UTR (NM_001142642, exon 1 of 19) 123 NM_001142642 381668 Mm.348782 NM_028596 ENSMUSG00000043323 Fbrsl1 2410025L10Rik|AI467568|Gm1049|Gm29766|mKIAA1545 fibrosin-like 1 protein-coding common_peak1_311_3504_-0.222418345731056_11.6639895560325_8.65080603725158 chr15 76349732 76351810 + 8.65080603725158 NA promoter-TSS (NM_001164608) promoter-TSS (NM_001164608) 339 NM_025340 106025 Mm.41463 NM_025340 ENSMUSG00000022552 Sharpin 0610041B22Rik|AW121341|RBCKL1|SIPL1|cpdm SHANK-associated RH domain interacting protein protein-coding common_peak1_119_1218_-0.389601355649797_10.0566817327953_8.64898392564954 chr15 99725375 99726599 + 8.64898392564954 NA TTS (NM_010271) TTS (NM_010271) 369 NM_183256 66379 Mm.5265 NM_183256 ENSMUSG00000023020 Cox14 2310016M24Rik|AA959804 cytochrome c oxidase assembly protein 14 protein-coding common_peak2_210_1500_0.308891077518274_10.7061538003798_8.6486566963077 chr2 165653279 165657274 + 8.6486566963077 NA promoter-TSS (NM_010165) promoter-TSS (NM_010165) -22 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding common_peak1_71_712_-0.51984828219851_9.21783412534463_8.64777768265223 chr14 52256650 52257817 + 8.64777768265223 NA Intergenic Intergenic -19661 NM_201637 67772 Mm.289934 NM_201637 ENSMUSG00000053754 Chd8 5830451P18Rik|AU015341|Duplin|HELSNF1|mKIAA1564 chromodomain helicase DNA binding protein 8 protein-coding common_peak2_83_405_0.565363348986034_8.94801759167819_8.64647910498807 chrX 96125507 96127818 + 8.64647910498807 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 30617 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_157_1640_-0.331648121214041_10.5145354629067_8.64632732978783 chr3 94442692 94444845 + 8.64632732978783 NA exon (NM_030116, exon 2 of 7) exon (NM_030116, exon 2 of 7) 432 NM_030116 78523 Mm.218515 NM_030116 ENSMUSG00000028140 Mrpl9 8030480E20Rik|AA409733|C330013D18Rik|L9mt mitochondrial ribosomal protein L9 protein-coding common_peak2_68_682_-0.533146448043295_9.14916854426844_8.64570848495791 chr13 42103064 42104791 + 8.64570848495791 NA intron (NM_007772, intron 2 of 8) intron (NM_007772, intron 2 of 8) 51906 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak1_86_866_-0.467090352555982_9.52634300694384_8.64476317640624 chr6 89643806 89644925 + 8.64476317640624 NA exon (NM_001178058, exon 1 of 16) exon (NM_001178058, exon 1 of 16) 377 NM_001178058 232223 Mm.229332 NM_153162 ENSMUSG00000000811 Txnrd3 AI196535|TR2|Tgr thioredoxin reductase 3 protein-coding common_peak1_380_3315_0.211116918831578_11.8007867509115_8.64277562437641 chr13 113599341 113602895 + 8.64277562437641 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 17446 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak2_103_555_0.489704794290137_9.36379346986858_8.64273921959157 chr9 41006262 41008974 + 8.64273921959157 NA Intergenic MER34A1|LTR|ERV1 -2990 NM_019465 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak1_39_398_-0.722498397405213_8.27899573751974_8.64182512351614 chr17 44702453 44703031 + 8.64182512351614 NA intron (NR_073392, intron 4 of 7) intron (NR_073392, intron 4 of 7) 33434 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_59_242_0.710456240178279_8.28004062369492_8.64182512351614 chr3 88448031 88449329 + 8.64182512351614 NA intron (NM_001163489, intron 9 of 14) intron (NM_001163489, intron 9 of 14) 7081 NM_013658 20351 Mm.439752 NM_013658 ENSMUSG00000028064 Sema4a AI132332|SemB|Semab sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A protein-coding common_peak1_79_794_-0.49045220016823_9.3895849500876_8.64048769485875 chr7 38270522 38271990 + 8.64048769485875 NA promoter-TSS (NM_025390) promoter-TSS (NM_025390) 92 NM_025390 66161 Mm.22284 NM_025390 ENSMUSG00000030423 Pop4 1110023P21Rik|Rpp29 processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae) protein-coding common_peak1_33_341_-0.78770394272537_8.02400054352321_8.63880413112262 chr5 36725995 36726710 + 8.63880413112262 NA Intergenic Intergenic 22327 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding common_peak1_212_1520_0.306489624275804_10.7240492498624_8.63746815199388 chr9 88730531 88733954 + 8.63746815199388 NA promoter-TSS (NM_007536) promoter-TSS (NM_007536) -392 NM_007536 12047 Mm.378888 NM_007536 ENSMUSG00000099974 Bcl2a1d A1-d B cell leukemia/lymphoma 2 related protein A1d protein-coding common_peak2_98_992_-0.434195443714209_9.73855218567127_8.63673853218677 chr6 83114553 83116542 + 8.63673853218677 NA promoter-TSS (NM_020619) promoter-TSS (NM_020619) 41 NM_020619 57377 Mm.28188 NM_020619 ENSMUSG00000030036 Mogs 1810017N02Rik|AI181835|Gcs1 mannosyl-oligosaccharide glucosidase protein-coding common_peak1_351_2985_0.222248537304834_11.655122718787_8.63540218865115 chr11 97819245 97823357 + 8.63540218865115 NA intron (NM_010688, intron 3 of 6) intron (NM_010688, intron 3 of 6) -19479 NM_001080935 68127 Mm.110270 NM_001080935 ENSMUSG00000050538 B230217C12Rik AI840637 RIKEN cDNA B230217C12 gene protein-coding common_peak1_107_1088_-0.4133560495046_9.88211021396461_8.63440193618759 chr13 90922869 90923994 + 8.63440193618759 NA intron (NM_024175, intron 1 of 3) CpG 309 NM_024175 66475 Mm.306302 NM_024175 ENSMUSG00000049517 Rps23 2410044J15Rik ribosomal protein S23 protein-coding common_peak2_130_773_0.420897505702463_9.80663850899564_8.63338010521416 chr14 30653638 30655252 + 8.63338010521416 NA promoter-TSS (NM_177815) promoter-TSS (NM_177815) 70 NM_177815 328370 Mm.259657 NM_177815 ENSMUSG00000052395 Rft1 D930025H04 RFT1 homolog protein-coding common_peak1_66_287_0.660618698707411_8.50023435079602_8.63287890294184 chr2 114174418 114175509 + 8.63287890294184 NA intron (NM_001290788, intron 1 of 33) intron (NM_001290788, intron 1 of 33) 376 NM_009702 11834 Mm.2545 NM_009702 ENSMUSG00000040383 Aqr AW495846|mKIAA0560 aquarius protein-coding common_peak1_332_3773_-0.213826024082469_11.7749656955592_8.63236519091569 chr16 5049054 5051176 + 8.63236519091569 NA promoter-TSS (NM_028720) promoter-TSS (NM_028720) 47 NM_026666 170644 Mm.66356 NM_026666 ENSMUSG00000039473 Ubn1 1110029L11Rik|2610108L02Rik|AA673476|AW124741 ubinuclein 1 protein-coding common_peak2_127_748_0.427268288225486_9.76245605257149_8.63139742882755 chr4 106803433 106805577 + 8.63139742882755 NA Intergenic Intergenic -4674 NM_025590 329910 Mm.222956 NM_025590 ENSMUSG00000034853 Acot11 1110020M10Rik|2010309H15Rik|AW060409|BFIT|BFIT1|Thea|Them1|mKIAA0707 acyl-CoA thioesterase 11 protein-coding common_peak2_154_1606_-0.335366422062467_10.4824710026439_8.63024278640846 chr17 83861119 83863287 + 8.63024278640846 NA Intergenic Intergenic -15413 NM_025325 107766 Mm.30100 NM_025325 ENSMUSG00000000673 Haao 0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding common_peak2_249_1889_0.276562571092626_11.0224518046547_8.62961570430999 chr1 195130406 195132603 + 8.62961570430999 NA promoter-TSS (NM_013499) promoter-TSS (NM_013499) 66 NM_013499 12946 Mm.301652 NM_013499 ENSMUSG00000016481 Cr1l Crry|Mcp|mCRY complement component (3b/4b) receptor 1-like protein-coding common_peak1_64_642_-0.551760406995051_9.05279472383042_8.62829255139436 chr4 108460958 108461967 + 8.62829255139436 NA intron (NM_175472, intron 2 of 30) intron (NM_175472, intron 2 of 30) 2036 NM_175472 230594 Mm.25181 NM_175472 ENSMUSG00000034610 Zcchc11 6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191 zinc finger, CCHC domain containing 11 protein-coding common_peak1_484_4551_0.181159107935148_12.2428643962742_8.62616365662377 chr6 17064598 17067215 + 8.62616365662377 NA intron (NM_207176, intron 1 of 6) intron (NM_207176, intron 1 of 6) 757 NM_207176 21753 Mm.436548 NM_011570 ENSMUSG00000029552 Tes D6Ertd352e|TESS|Tes1|Tes2|testin2 testis derived transcript protein-coding common_peak1_129_1327_-0.371512599827673_10.1892831314331_8.62579667772967 chr11 58954562 58955735 + 8.62579667772967 NA promoter-TSS (NM_206882) promoter-TSS (NM_206882) 463 NM_178218 319162 Mm.212549 NM_178218 ENSMUSG00000078851 Hist3h2a - histone cluster 3, H2a protein-coding common_peak1_34_350_-0.773881505781027_8.06838646741405_8.62342899511453 chr19 34878013 34878777 + 8.62342899511453 NA promoter-TSS (NM_023792) promoter-TSS (NM_023792) -478 NM_023792 75735 Mm.24742 NM_023792 ENSMUSG00000033610 Pank1 Pank|Pank1b pantothenate kinase 1 protein-coding common_peak1_34_350_-0.773881505781027_8.06838646741405_8.62342899511453-2 chr6 120356991 120357530 + 8.62342899511453 NA intron (NR_045558, intron 1 of 9) intron (NR_045558, intron 1 of 9) 209 NM_026028 67200 Mm.45767 NM_026028 ENSMUSG00000030177 Ccdc77 2400002C23Rik|2700091N06Rik|AV168274 coiled-coil domain containing 77 protein-coding common_peak1_254_1941_0.272448878586586_11.0595519247125_8.62170803661021 chr13 51736608 51738899 + 8.62170803661021 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 55994 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_110_1120_-0.40665239544073_9.92724436508506_8.62032645930232 chr8 75032987 75034996 + 8.62032645930232 NA intron (NM_011622, intron 1 of 14) CpG 305 NM_011622 21968 Mm.1967 NM_011622 ENSMUSG00000042870 Tom1 - target of myb1 trafficking protein protein-coding common_peak1_274_2148_0.259946837836452_11.199423186346_8.62032046369637 chr16 11454761 11457565 + 8.62032046369637 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 50515 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding unique_peak2_27_285_-0.873306586760464_7.72321804339816_8.61606257388446 chr15 80734894 80736459 + 8.61606257388446 NA intron (NM_144812, intron 1 of 24) intron (NM_144812, intron 1 of 24) 24363 NM_144812 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak2_27_285_-0.873306586760464_7.72321804339816_8.61606257388446 chrX 99135155 99137061 + 8.61606257388446 NA promoter-TSS (NM_010110) promoter-TSS (NM_010110) 47 NM_010110 13641 Mm.3374 NM_010110 ENSMUSG00000031217 Efnb1 Cek5-L|EFL-3|Elk-L|Epl2|Eplg2|LERK-2|Lerk2|Stra1 ephrin B1 protein-coding common_peak1_140_1448_-0.353576275977627_10.3240537415681_8.6135539061904 chr5 122396659 122398916 + 8.6135539061904 NA intron (NM_019824, intron 2 of 6) B1F2|SINE|Alu 5859 NM_019824 56378 Mm.275942 NM_019824 ENSMUSG00000029465 Arpc3 1110006A04Rik|p21-ARC|p21-Ar|p21Arc actin related protein 2/3 complex, subunit 3 protein-coding common_peak2_569_5617_0.163375708488454_12.5375287633706_8.61329420221357 chr14 79514876 79523837 + 8.61329420221357 NA intron (NM_001286411, intron 1 of 8) intron (NM_001286411, intron 1 of 8) 3682 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak2_108_1098_-0.410233435419595_9.89685895323943_8.61303484333674 chr5 30886868 30889778 + 8.61303484333674 NA promoter-TSS (NM_001048192) promoter-TSS (NM_001048192) -529 NM_174849 231093 Mm.440364 NM_174849 ENSMUSG00000029165 Agbl5 9430057O19Rik|CCP5 ATP/GTP binding protein-like 5 protein-coding common_peak2_141_867_0.398220624588895_9.96066154473893_8.61260679657062 chr13 45001022 45002602 + 8.61260679657062 NA intron (NM_025772, intron 1 of 9) CpG 284 NM_025772 94245 Mm.352311 NM_025772 ENSMUSG00000057531 Dtnbp1 5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy dystrobrevin binding protein 1 protein-coding unique_peak2_18_203_-1.0720611385746_7.13639477268419_8.61220619916761 chr2 69777745 69778847 + 8.61220619916761 NA intron (NM_001077684, intron 4 of 8) intron (NM_001077684, intron 4 of 8) 11190 NM_001077684 75051 Mm.195726 NM_001077684 ENSMUSG00000070883 Ccdc173 4930525K21Rik|4930578N16Rik coiled-coil domain containing 173 protein-coding common_peak1_18_203_-1.0720611385746_7.13639477268419_8.61220619916761-3 chr5 115132043 115132517 + 8.61220619916761 NA intron (NM_175352, intron 1 of 4) B1_Mus1|SINE|Alu 2695 NM_175352 106840 Mm.29241 NM_175352 ENSMUSG00000046562 Unc119b AA407659|AI414892 unc-119 lipid binding chaperone B protein-coding common_peak1_18_203_-1.0720611385746_7.13639477268419_8.61220619916761 chr15 75678556 75679001 + 8.61220619916761 NA promoter-TSS (NM_028404) promoter-TSS (NM_028404) 12 NM_028404 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding common_peak1_18_203_-1.0720611385746_7.13639477268419_8.61220619916761-2 chr4 141862191 141862553 + 8.61220619916761 NA intron (NM_025994, intron 1 of 3) intron (NM_025994, intron 1 of 3) 12548 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding unique_peak2_18_203_-1.0720611385746_7.13639477268419_8.61220619916761-2 chr6 47953240 47954195 + 8.61220619916761 NA non-coding (NR_027963, exon 6 of 6) non-coding (NR_027963, exon 6 of 6) 327 NM_178898 101197 Mm.241063 NM_178898 ENSMUSG00000045466 Zfp956 AI894139 zinc finger protein 956 protein-coding common_peak1_35_359_-0.760555423270651_8.11157538469435_8.61204926792989 chr14 27357193 27357895 + 8.61204926792989 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) -3845 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_35_359_-0.760555423270651_8.11157538469435_8.61204926792989 chr12 101904376 101906748 + 8.61204926792989 NA intron (NM_028446, intron 2 of 20) intron (NM_028446, intron 2 of 20) 7609 NM_028446 109181 Mm.208618 NM_028446 ENSMUSG00000021188 Trip11 2610511G22Rik|3110031G15Rik|6030460N08Rik|AI450776|GMAP-210|TRIP230 thyroid hormone receptor interactor 11 protein-coding common_peak1_21_230_-0.991951298722106_7.355773392055_8.61160734746968 chr17 13145454 13146005 + 8.61160734746968 NA Intergenic RMER12B|LTR|ERVK -13938 NM_199252 381058 Mm.390935 NM_199252 ENSMUSG00000067049 Unc93a Unc93l|unc-93A unc-93 homolog A (C. elegans) protein-coding common_peak2_319_2631_0.235639698640957_11.4797636230557_8.6105373561561 chr9 119321595 119323830 + 8.6105373561561 NA promoter-TSS (NR_045693) promoter-TSS (NR_045693) -285 NM_133985 108737 Mm.293565 NM_133985 ENSMUSG00000036737 Oxsr1 2210022N24Rik|2810422B09Rik|AI462649|AW209236|Osr1|mKIAA1101 oxidative-stress responsive 1 protein-coding common_peak1_433_3935_0.194316119846892_12.0396725652627_8.60986089259403 chr6 134919740 134922832 + 8.60986089259403 NA exon (NM_009875, exon 1 of 3) exon (NM_009875, exon 1 of 3) 885 NM_009875 12576 Mm.2958 NM_009875 ENSMUSG00000003031 Cdkn1b AA408329|AI843786|Kip1|p27|p27Kip1 cyclin-dependent kinase inhibitor 1B protein-coding unique_peak1_12_11_2.34384643273342_4.75688571708787_8.60768941281657-2 chr12 57235203 57235541 + 8.60768941281657 NA intron (NM_001164370, intron 1 of 9) ORR1A2|LTR|ERVL-MaLR 4947 NM_001164370 73490 Mm.268180 NM_001164370 ENSMUSG00000047022 Mipol1 1700081O04Rik|6030439O22Rik|AU021838|AW536152|D12Ertd19e mirror-image polydactyly 1 protein-coding unique_peak1_12_11_2.34384643273342_4.75688571708787_8.60768941281657-4 chr6 140626019 140626386 + 8.60768941281657 NA promoter-TSS (NM_001309436) promoter-TSS (NM_001309436) -683 NM_001309436 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding unique_peak1_12_11_2.34384643273342_4.75688571708787_8.60768941281657-3 chr13 17625056 17625347 + 8.60768941281657 NA intron (NM_138654, intron 6 of 13) ID4_|SINE|ID 69564 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding unique_peak1_12_11_2.34384643273342_4.75688571708787_8.60768941281657 chr11 96641815 96642210 + 8.60768941281657 NA intron (NM_001033186, intron 4 of 12) intron (NM_001033186, intron 4 of 12) 135543 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding unique_peak2_30_313_-0.827938544157321_7.88065147681297_8.60629445512118-2 chr7 4492248 4494050 + 8.60629445512118 NA intron (NM_029834, intron 3 of 21) intron (NM_029834, intron 3 of 21) 8531 NM_029834 232807 Mm.360391 NM_029834 ENSMUSG00000019254 Ppp1r12c 2410197A17Rik|AI839747|B430101M08|Mbs85 protein phosphatase 1, regulatory (inhibitor) subunit 12C protein-coding unique_peak2_30_313_-0.827938544157321_7.88065147681297_8.60629445512118 chr4 155760212 155761925 + 8.60629445512118 NA promoter-TSS (NM_179203) promoter-TSS (NM_179203) 30 NM_179203 108888 Mm.241152 NM_179203 ENSMUSG00000029036 Atad3a 2400004H09Rik|Atad3|Tob3|mKIAA1273 ATPase family, AAA domain containing 3A protein-coding unique_peak1_17_26_1.7497978597092_5.62978643201807_8.60586741250963-3 chr12 100880221 100880655 + 8.60586741250963 NA intron (NM_001177673, intron 2 of 2) intron (NM_001177673, intron 2 of 2) 19086 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding unique_peak1_17_26_1.7497978597092_5.62978643201807_8.60586741250963 chr1 106608959 106609435 + 8.60586741250963 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -62566 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA unique_peak1_17_26_1.7497978597092_5.62978643201807_8.60586741250963-7 chr4 150214672 150215116 + 8.60586741250963 NA Intergenic B1_Mur4|SINE|Alu -13759 NM_009802 12353 Mm.232523 NM_009802 ENSMUSG00000028972 Car6 Ca6|DOC1 carbonic anhydrase 6 protein-coding unique_peak1_17_26_1.7497978597092_5.62978643201807_8.60586741250963-6 chr13 93842213 93842620 + 8.60586741250963 NA intron (NM_009712, intron 4 of 7) (CTGTG)n|Simple_repeat|Simple_repeat 51639 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA unique_peak1_17_26_1.7497978597092_5.62978643201807_8.60586741250963-2 chr1 151490729 151491166 + 8.60586741250963 NA intron (NM_011277, intron 1 of 6) intron (NM_011277, intron 1 of 6) 9876 NM_011277 19821 Mm.474038 NM_011277 ENSMUSG00000026484 Rnf2 AI326319|AI450156|AU019207|Ring1B|dinG ring finger protein 2 protein-coding unique_peak1_17_26_1.7497978597092_5.62978643201807_8.60586741250963-5 chr13 52061750 52062141 + 8.60586741250963 NA Intergenic ORR1C2|LTR|ERVL-MaLR -34796 NR_045061 74050 Mm.84860 NR_045061 4921525O09Rik - RIKEN cDNA 4921525O09 gene ncRNA unique_peak1_17_26_1.7497978597092_5.62978643201807_8.60586741250963-4 chr12 115791114 115791601 + 8.60586741250963 NA Intergenic Intergenic -95563 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA common_peak1_465_4320_0.185574356470472_12.169936693825_8.60407226676844 chr11 22857913 22860757 + 8.60407226676844 NA intron (NM_001169114, intron 1 of 1) CpG 400 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak1_31_84_1.11347463817382_6.96612825522461_8.60288349684832 chr5 24730136 24730691 + 8.60288349684832 NA 5' UTR (NM_001081441, exon 1 of 6) 5' UTR (NM_001081441, exon 1 of 6) 267 NM_001081441 269633 Mm.392539 NM_026621 ENSMUSG00000055235 Wdr86 2810046M22Rik|BC059069 WD repeat domain 86 protein-coding common_peak2_89_897_-0.457780685990159_9.58168129174607_8.60232367621873 chr6 121244942 121246525 + 8.60232367621873 NA promoter-TSS (NM_011909) promoter-TSS (NM_011909) -173 NM_011909 24110 Mm.326911 NM_011909 ENSMUSG00000030107 Usp18 1110058H21Rik|AW047653|UBP43|Ubp15 ubiquitin specific peptidase 18 protein-coding common_peak2_95_960_-0.441392530308942_9.68769635561928_8.59998769425796 chr19 4125632 4127197 + 8.59998769425796 NA promoter-TSS (NM_016666) promoter-TSS (NM_016666) 454 NM_025889 66990 Mm.276255 NM_025889 Tmem134 2410001H17Rik|AI463452 transmembrane protein 134 protein-coding common_peak2_77_363_0.591761120595521_8.80367520049646_8.59641547690873 chr19 3282394 3283588 + 8.59641547690873 NA promoter-TSS (NM_009212) promoter-TSS (NM_009212) 19 NM_009212 20589 Mm.3179 NM_009212 ENSMUSG00000024831 Ighmbp2 AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|nmd|sma immunoglobulin mu binding protein 2 protein-coding common_peak1_102_548_0.49088554477154_9.34610511139097_8.59533698901968 chr5 109866010 109867536 + 8.59533698901968 NA Intergenic Intergenic -32631 NR_027964 667213 Mm.454429 NR_027964 ENSMUSG00000105044 Gm10416 EG667213|ENSMUSG00000072761 zinc finger protein pseudogene pseudo common_peak1_36_109_0.99842393768675_7.28057168236804_8.59492619998555 chr14 57103964 57104712 + 8.59492619998555 NA intron (NM_008125, intron 1 of 1) CpG 364 NM_008125 14619 Mm.390683 NM_008125 ENSMUSG00000046352 Gjb2 AI325222|Cnx26|Cx26|Gjb-2 gap junction protein, beta 2 protein-coding common_peak1_163_1061_0.362099836633986_10.2336179691211_8.59481854197728 chr6 55037426 55038906 + 8.59481854197728 NA exon (NM_180678, exon 1 of 17) exon (NM_180678, exon 1 of 17) 165 NM_180678 353172 Mm.250004 NM_180678 ENSMUSG00000029777 Gars GENA202|Gena201|Nmf249|Sgrp23 glycyl-tRNA synthetase protein-coding common_peak1_104_1055_-0.418813888681635_9.83498717501764_8.5948154653022 chr10 98743642 98745278 + 8.5948154653022 NA Intergenic Intergenic -170692 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak2_57_571_-0.584595711079464_8.86757348123866_8.59084454654511 chr7 114300761 114302698 + 8.59084454654511 NA Intergenic L4_A_Mam|LINE|RTE-X -25613 NM_011965 26440 Mm.121265 NM_011965 ENSMUSG00000030751 Psma1 C2|HC2|Pros-30|alpha-type proteasome (prosome, macropain) subunit, alpha type 1 protein-coding common_peak1_71_321_0.626993106130762_8.64441343118_8.5886046480885 chr10 61203854 61204917 + 8.5886046480885 NA intron (NM_001081127, intron 18 of 21) intron (NM_001081127, intron 18 of 21) 29123 NM_023064 65971 Mm.30227 NM_023064 ENSMUSG00000020096 Tbata 1700021K02Rik|AI428928|Spatial|Titest thymus, brain and testes associated protein-coding common_peak2_120_691_0.441938616998723_9.65559753613609_8.5880555862154 chr5 135688179 135690096 + 8.5880555862154 NA promoter-TSS (NM_008898) promoter-TSS (NM_008898) -8 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak1_38_119_0.966052853999342_7.38991702260819_8.58674650283255 chr8 126881246 126881925 + 8.58674650283255 NA Intergenic Intergenic 64336 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak1_249_1890_0.2757994422513_11.0228333690754_8.58597218568966 chr5 8055851 8058119 + 8.58597218568966 NA intron (NM_001080974, intron 1 of 7) intron (NM_001080974, intron 1 of 7) 443 NM_001080974 109552 Mm.96211 NM_025618 ENSMUSG00000003161 Sri 2210417O06Rik|2900070H08Rik|Sor sorcin protein-coding common_peak1_163_1707_-0.323424372182352_10.5763800735293_8.58590505125713 chr19 46697588 46699844 + 8.58590505125713 NA intron (NM_025563, intron 1 of 4) intron (NM_025563, intron 1 of 4) -8727 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak2_226_1659_0.292977220753444_10.843456136611_8.58400466749457 chr1 58651888 58653638 + 8.58400466749457 NA intron (NR_045007, intron 1 of 1) intron (NR_045007, intron 1 of 1) 122 NR_045007 100504501 Mm.440933 NR_045007 ENSMUSG00000102059 Gm20257 - caspase 8 pseudogene pseudo common_peak2_79_377_0.582116425782417_8.85330063711228_8.58257873564307 chr10 83647968 83649245 + 8.58257873564307 NA promoter-TSS (NM_145220) promoter-TSS (NM_145220) 58 NM_145220 216190 Mm.282985 NM_145220 ENSMUSG00000020263 Appl2 Dip3b adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 protein-coding common_peak1_174_1833_-0.3112266221932_10.6851646124985_8.58210998366792 chr9 109057303 109059918 + 8.58210998366792 NA TTS (NM_001284332) TTS (NM_001284332) 641 NM_001012236 22040 Mm.439964 NM_011637 ENSMUSG00000049734 Trex1 AU041952 three prime repair exonuclease 1 protein-coding common_peak2_306_2490_0.2416819656593_11.4033502890705_8.58209094010388 chr15 25983498 25986617 + 8.58209094010388 NA exon (NM_144523, exon 1 of 6) exon (NM_144523, exon 1 of 6) 691 NM_144523 52521 Mm.29145 NM_144523 ENSMUSG00000052253 Zfp622 1110033B05Rik|D15Ertd806e|ZPR9|Znf622 zinc finger protein 622 protein-coding common_peak2_355_3032_0.219713208512731_11.6763863868805_8.57943201388894 chr5 107647377 107652090 + 8.57943201388894 NA intron (NM_001289569, intron 11 of 12) intron (NM_001289569, intron 11 of 12) -15883 NR_046195 78443 Mm.490703 NR_046195 ENSMUSG00000085900 A930041C12Rik - RIKEN cDNA A930041C12 gene ncRNA common_peak1_120_1227_-0.38552800073473_10.0693308450028_8.57923061921712 chr8 64947153 64948010 + 8.57923061921712 NA intron (NM_028427, intron 1 of 5) CpG 396 NM_028427 73067 Mm.294445 NM_028427 ENSMUSG00000025521 Tmem192 3110005G23Rik transmembrane protein 192 protein-coding common_peak1_126_741_0.426935317553243_9.74874303539742_8.57879167008847 chr15 93397730 93399088 + 8.57879167008847 NA promoter-TSS (NM_175363) promoter-TSS (NM_175363) -55 NM_001285863 223828 Mm.74208 NM_146062 ENSMUSG00000036167 Pphln1 CR|HSPC206|HSPC232 periphilin 1 protein-coding common_peak1_126_741_0.426935317553243_9.74874303539742_8.57879167008847-2 chr3 104788439 104790000 + 8.57879167008847 NA intron (NM_001291859, intron 1 of 4) intron (NM_001291859, intron 1 of 4) 185 NM_007484 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding common_peak2_275_2160_0.258336585759997_11.2066516497395_8.57812847180255 chr6 149187049 149189418 + 8.57812847180255 NA intron (NM_001113424, intron 1 of 6) PB1D7|SINE|Alu 479 NM_001113424 232566 Mm.209147 NM_001113424 ENSMUSG00000068250 Amn1 5830467E07Rik|A230083D09|C730024G19Rik antagonist of mitotic exit network 1 protein-coding common_peak1_229_1689_0.290371170988637_10.8679931166639_8.57564504427498 chr6 31398203 31399896 + 8.57564504427498 NA promoter-TSS (NR_040300) promoter-TSS (NR_040300) 221 NM_013791 27418 Mm.238038 NM_013791 ENSMUSG00000025609 Mkln1 A130067F06Rik|AU015903|BB154892 muskelin 1, intracellular mediator containing kelch motifs protein-coding common_peak2_56_561_-0.589927600670753_8.83946251988555_8.57462297626182 chr12 73655958 73658120 + 8.57462297626182 NA intron (NM_001313977, intron 3 of 14) intron (NM_001313977, intron 3 of 14) 72243 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_49_181_0.804832863124044_7.91021107176072_8.57447177229101 chr11 106701470 106702383 + 8.57447177229101 NA intron (NM_001305158, intron 2 of 14) RMER13A|LTR|ERVK 13355 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak2_123_1260_-0.380445733221201_10.1101296937176_8.57417449854867 chr15 27640243 27643033 + 8.57417449854867 NA Intergenic Intergenic -10945 NM_001013792 432940 Mm.309164 NM_001013792 ENSMUSG00000046034 Otulin C79097|Fam105b|m3Sapc|m7-1Sapc OTU deubiquitinase with linear linkage specificity protein-coding common_peak1_25_267_-0.91066794581684_7.61075521754935_8.57350710464996 chr1 40523351 40523943 + 8.57350710464996 NA intron (NM_010553, intron 3 of 12) intron (NM_010553, intron 3 of 12) 8285 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_88_886_-0.459771925536876_9.56290433153262_8.57322992985613 chr7 104291838 104293243 + 8.57322992985613 NA Intergenic B2_Mm2|SINE|B2 -4434 NM_001310602 667823 Mm.482375 NM_001310602 ENSMUSG00000060441 Trim5 EG667823|Gm8833 tripartite motif-containing 5 protein-coding common_peak2_88_886_-0.459771925536876_9.56290433153262_8.57322992985613 chr4 118427338 118429086 + 8.57322992985613 NA 5' UTR (NM_001039175, exon 1 of 7) 5' UTR (NM_001039175, exon 1 of 7) 119 NM_019422 54325 Mm.282096 NM_019422 ENSMUSG00000006390 Elovl1 AA407424|BB151133|Ssc1 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 protein-coding common_peak1_50_503_-0.629609146372459_8.66247535031369_8.57082468020735 chr16 49770983 49771994 + 8.57082468020735 NA Intergenic Intergenic 72194 NM_028680 73916 Mm.241276 NM_028680 ENSMUSG00000032965 Ift57 4833420A15Rik|Esrrbl1|Hippi|MHS4R2 intraflagellar transport 57 protein-coding common_peak1_28_294_-0.855907829736636_7.77661722938089_8.5707292412012 chr2 30251572 30252247 + 8.5707292412012 NA intron (NM_177725, intron 2 of 3) intron (NM_177725, intron 2 of 3) 14140 NM_177725 241296 Mm.389232 NM_177725 ENSMUSG00000007476 Lrrc8a Lrrc8|mKIAA1437 leucine rich repeat containing 8A protein-coding common_peak1_17_194_-1.10264495187694_7.05600783781114_8.57009596515658-2 chr4 140702842 140703292 + 8.57009596515658 NA intron (NM_173867, intron 2 of 12) CpG-10575 1594 NM_173867 108911 Mm.253 NM_173867 ENSMUSG00000040945 Rcc2 2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470 regulator of chromosome condensation 2 protein-coding unique_peak2_17_194_-1.10264495187694_7.05600783781114_8.57009596515658-2 chr12 113167493 113168815 + 8.57009596515658 NA Intergenic Intergenic 11733 NM_134041 104732 Mm.87616 NM_134041 ENSMUSG00000037466 4930427A07Rik AA536649|mFLJ00116 RIKEN cDNA 4930427A07 gene protein-coding common_peak1_17_194_-1.10264495187694_7.05600783781114_8.57009596515658 chr10 67608007 67608432 + 8.57009596515658 NA Intergenic Intergenic -59264 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding unique_peak2_17_194_-1.10264495187694_7.05600783781114_8.57009596515658 chr10 117938738 117939731 + 8.57009596515658 NA intron (NR_045342, intron 3 of 3) PB1D10|SINE|Alu 13775 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_165_1729_-0.320438142169383_10.5963372514394_8.56976998879734 chr5 134313073 134315324 + 8.56976998879734 NA intron (NM_001080746, intron 1 of 34) CpG 562 NM_001080748 14886 Mm.261570 NM_010365 ENSMUSG00000060261 Gtf2i 6030441I21Rik|BAP-135|Diws1t|GtfII-I|Spin|TFII-I|WBSCR6 general transcription factor II I protein-coding common_peak2_136_1403_-0.358989663769702_10.2758323884197_8.5684318877327 chr15 85652679 85654733 + 8.5684318877327 NA Intergenic Intergenic -50067 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_94_949_-0.443313912943099_9.67012674674676_8.56816655854903 chr1 93753627 93755694 + 8.56816655854903 NA promoter-TSS (NM_174874) promoter-TSS (NM_174874) 178 NM_025920 67026 Mm.272356 NM_025920 ENSMUSG00000026279 Thap4 2010320B01Rik THAP domain containing 4 protein-coding common_peak1_92_928_-0.448718065495063_9.63517575363512_8.56732320738203 chr11 58903477 58904598 + 8.56732320738203 NA intron (NM_011758, intron 1 of 4) intron (NM_011758, intron 1 of 4) 188 NM_011758 22698 Mm.127646 NM_011758 ENSMUSG00000037001 Zfp39 CTfin33|Zfp-39 zinc finger protein 39 protein-coding common_peak2_92_928_-0.448718065495063_9.63517575363512_8.56732320738203 chr7 27731128 27732435 + 8.56732320738203 NA intron (NM_009560, intron 1 of 4) intron (NM_009560, intron 1 of 4) 372 NM_009560 22718 Mm.66913 NM_009560 ENSMUSG00000037640 Zfp60 6330516O17Rik|AI426106|AI449354|Mfg-3|Mfg3 zinc finger protein 60 protein-coding common_peak1_49_493_-0.635739728261937_8.63049736745371_8.56579907262909 chr9 108120963 108121947 + 8.56579907262909 NA intron (NM_007567, intron 3 of 11) intron (NM_007567, intron 3 of 11) -12263 NR_126078 76873 Mm.436935 NR_126077 ENSMUSG00000102224 4930447F24Rik - RIKEN cDNA 4930447F24 gene ncRNA common_peak1_55_217_0.744992736427355_8.1406806929906_8.56396817761008 chr3 27938555 27939353 + 8.56396817761008 NA intron (NM_001164056, intron 1 of 26) CpG 274 NM_001164056 18805 Mm.212039 NM_008875 ENSMUSG00000027695 Pld1 AA536939|C85393|Pld1a|Pld1b|mPLD1 phospholipase D1 protein-coding common_peak2_110_1119_-0.405364849580272_9.92660059215483_8.56374542363388 chr11 120726675 120730759 + 8.56374542363388 NA TTS (NM_007621) TTS (NM_007621) -1436 NM_026428 67880 Mm.231091 NM_026428 ENSMUSG00000039450 Dcxr 0610038K04Rik|1810027P18Rik|XR dicarbonyl L-xylulose reductase protein-coding common_peak2_148_928_0.385390215724968_10.0522298942451_8.56363941711247 chr9 50616272 50617833 + 8.56363941711247 NA promoter-TSS (NM_028300) promoter-TSS (NM_028300) -269 NM_028300 72614 Mm.147232 NM_028300 ENSMUSG00000000167 Pih1d2 2700059L22Rik PIH1 domain containing 2 protein-coding common_peak1_48_483_-0.64198700036391_8.59786973709264_8.56276825594605 chr14 36952964 36953740 + 8.56276825594605 NA intron (NM_027045, intron 1 of 10) Lx9|LINE|L1 15412 NM_027045 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding common_peak1_47_473_-0.648355469619807_8.56456551408835_8.56187353490286 chr15 73169804 73170731 + 8.56187353490286 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 14680 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_26_61_1.26801125645272_6.58820193861323_8.56115112006263 chr13 46721877 46722394 + 8.56115112006263 NA intron (NM_175749, intron 1 of 21) B1F|SINE|Alu 5714 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak1_12_149_-1.3000097570413_6.57881381197523_8.56115112006262 chr8 120763945 120764359 + 8.56115112006262 NA Intergenic (TCCA)n|Simple_repeat|Simple_repeat 25513 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_235_2555_-0.260921093532456_11.1892115741808_8.56102235371919 chr19 53183222 53190340 + 8.56102235371919 NA intron (NM_013758, intron 1 of 15) intron (NM_013758, intron 1 of 15) 42784 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak1_295_3298_-0.228192477794453_11.5737168236677_8.56090936351746 chr16 22264558 22266673 + 8.56090936351746 NA intron (NM_009186, intron 1 of 8) CpG 314 NM_009186 20462 Mm.210352 NM_009186 ENSMUSG00000022858 Tra2b 5730405G21Rik|D16Ertd266e|SIG-41|Sfrs10|Silg41|TRA2beta transformer 2 beta homolog (Drosophila) protein-coding common_peak2_103_1044_-0.420641359954601_9.81896654699094_8.55981460185764 chr18 10617295 10618884 + 8.55981460185764 NA intron (NM_009226, intron 1 of 3) CpG 293 NM_009226 20641 Mm.603 NM_009226 ENSMUSG00000002477 Snrpd1 AA407109|AL023031|SMD1 small nuclear ribonucleoprotein D1 protein-coding common_peak2_32_89_1.0854668513312_7.03458652199528_8.55826374147054-2 chr15 53723813 53724391 + 8.55826374147054 NA intron (NM_177225, intron 2 of 4) intron (NM_177225, intron 2 of 4) 178334 NM_177225 320679 Mm.442455 NM_177225 ENSMUSG00000058656 Samd12 A830094I09Rik sterile alpha motif domain containing 12 protein-coding common_peak2_32_89_1.0854668513312_7.03458652199528_8.55826374147054 chr11 50827254 50828158 + 8.55826374147054 NA promoter-TSS (NM_013922) promoter-TSS (NM_013922) 25 NM_013922 30944 Mm.103674 NM_013922 ENSMUSG00000044807 Zfp354c 5330421P20Rik|AJ18|AW743325|Kid3|Tcf17l2|Znf354c|mKIAA4218 zinc finger protein 354C protein-coding common_peak1_121_1238_-0.383828709907274_10.083046117187_8.55671260864665 chr15 66811452 66813252 + 8.55671260864665 NA intron (NM_001029841, intron 1 of 7) intron (NM_001029841, intron 1 of 7) 19477 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_26_275_-0.886316889938573_7.66536601180888_8.55586975862458 chr11 69039933 69040418 + 8.55586975862458 NA Intergenic CpG -5462 NM_011496 20877 Mm.3488 NM_011496 ENSMUSG00000020897 Aurkb AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5 aurora kinase B protein-coding common_peak1_26_275_-0.886316889938573_7.66536601180888_8.55586975862458-2 chr4 127243748 127244189 + 8.55586975862458 NA intron (NM_030252, intron 1 of 1) CpG 184 NM_030252 80284 Mm.139607 NM_030252 ENSMUSG00000042380 Smim12 BC003266 small integral membrane protein 12 protein-coding common_peak1_32_331_-0.797719483686046_7.9761796895039_8.55512424916019 chr8 122318322 122319037 + 8.55512424916019 NA intron (NM_009569, intron 3 of 9) intron (NM_009569, intron 3 of 9) 36538 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_40_130_0.928020263527976_7.49743313330144_8.55341100114054 chr18 80529201 80530107 + 8.55341100114054 NA Intergenic Intergenic 14892 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_85_420_0.55466305837391_8.99500795225335_8.55289212097098 chr9 65293531 65294928 + 8.55289212097098 NA promoter-TSS (NM_001044389) promoter-TSS (NM_001044389) -31 NM_001044389 270166 Mm.30088 NM_011802 ENSMUSG00000015357 Clpx AU014732|E330029I21 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding common_peak1_40_406_-0.707441719200822_8.31516412466584_8.55283272013309 chr13 101730432 101731142 + 8.55283272013309 NA intron (NM_001077495, intron 2 of 15) MTD|LTR|ERVL-MaLR 37430 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_40_406_-0.707441719200822_8.31516412466584_8.55283272013309-2 chr9 63740793 63741438 + 8.55283272013309 NA intron (NM_016769, intron 1 of 8) B4A|SINE|B4 16879 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_60_601_-0.569100225712729_8.94906956390334_8.55268608778685 chr5 140636809 140638646 + 8.55268608778685 NA intron (NM_001308040, intron 1 of 12) intron (NM_001308040, intron 1 of 12) 11304 NM_001308040 78339 Mm.28947 NM_175274 ENSMUSG00000036565 Ttyh3 2900029G13Rik|AI414930|TTY3|mTTY3 tweety family member 3 protein-coding common_peak2_83_834_-0.474933121190205_9.46816582676631_8.5526396435311 chr14 63543161 63544643 + 8.5526396435311 NA promoter-TSS (NM_177594) promoter-TSS (NM_177594) 51 NM_177594 210376 Mm.441613 NM_177594 ENSMUSG00000035078 Mtmr9 9430075G12Rik|AA516943|AF073881|LIP-STYX|MTMR8|mMTMH3 myotubularin related protein 9 protein-coding common_peak2_433_3937_0.193583229284579_12.0400390105438_8.54944908235439 chr11 116029644 116032302 + 8.54944908235439 NA intron (NM_001286006, intron 1 of 15) intron (NM_001286006, intron 1 of 15) 657 NM_172569 217331 Mm.297706 NM_172569 ENSMUSG00000020770 Unk B230379M23Rik|Zc3h5|Zc3hdc5|mKIAA1753 unkempt family zinc finger protein-coding common_peak1_167_1752_-0.318298703401972_10.6164609290586_8.54937072067426 chr13 5860374 5861361 + 8.54937072067426 NA promoter-TSS (NM_011803) promoter-TSS (NM_011803) -622 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak1_44_152_0.86879079487198_7.69178324012864_8.54905276850377 chr1 170845479 170846518 + 8.54905276850377 NA intron (NM_001081304, intron 4 of 15) RMER4B|LTR|ERVK 21773 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding common_peak2_78_370_0.586823714492514_8.82868723386706_8.54890404078095 chr2 140169888 140171334 + 8.54890404078095 NA promoter-TSS (NM_001081090) promoter-TSS (NM_001081090) -35 NM_027093 69487 Mm.287921 NM_027093 ENSMUSG00000027384 Ndufaf5 2310003L22Rik NADH dehydrogenase (ubiquinone) complex I, assembly factor 5 protein-coding unique_peak2_5_87_-1.89888077291791_5.50999123217834_8.54775364794526 chr6 125222313 125222939 + 8.54775364794526 NA TTS (NM_009496) TTS (NM_009496) 7045 NM_001080557 22317 Mm.32321 NM_009496 ENSMUSG00000030337 Vamp1 Syb-1|Syb1|VAMP-1|lew vesicle-associated membrane protein 1 protein-coding common_peak2_70_701_-0.522167674457544_9.19424338307579_8.54620348476867 chr10 75564909 75566838 + 8.54620348476867 NA Intergenic Intergenic -2789 NM_001305992 14598 Mm.4559 NM_008116 ENSMUSG00000006345 Ggt1 CD224|GGT|GGT 1|GGT-1|Ggtp|dwg gamma-glutamyltransferase 1 protein-coding common_peak2_54_541_-0.600858022967955_8.78172002986989_8.54608934938671 chr1 191312332 191313470 + 8.54608934938671 NA intron (NM_025424, intron 1 of 3) intron (NM_025424, intron 1 of 3) 5217 NM_025424 66208 Mm.46444 NM_025424 ENSMUSG00000037499 Nenf 1110060M21Rik|SCIRP10|Spuf neuron derived neurotrophic factor protein-coding common_peak1_67_671_-0.535556539431877_9.12453915306282_8.54492624956534 chr13 24599115 24600189 + 8.54492624956534 NA intron (NR_024599, intron 1 of 1) intron (NR_024599, intron 1 of 1) 5115 NR_024599 76024 Mm.440710 NR_024599 Gm11346 5830431A10Rik|AI447617|Gm11347|OTTMUSG00000000601|OTTMUSG00000000602 X-linked lymphocyte-regulated 5 pseudogene pseudo common_peak1_63_630_-0.552018309484669_9.02548704024021_8.54459027380593 chr17 24719070 24719996 + 8.54459027380593 NA promoter-TSS (NM_008503) promoter-TSS (NM_008503) 299 NR_028515 100306952 Mm.484806 NR_028515 ENSMUSG00000089255 Snora78 ACA64 small nucleolar RNA, H/ACA box 7 snoRNA common_peak1_145_1503_-0.345657514105651_10.3817600946248_8.544172087071 chr9 21124865 21126349 + 8.544172087071 NA intron (NM_001205312, intron 3 of 24) ID_B1|SINE|B4 5668 NM_018793 54721 Mm.20249 NM_018793 ENSMUSG00000032175 Tyk2 JTK1 tyrosine kinase 2 protein-coding common_peak1_39_125_0.940466615317216_7.44751323115852_8.54366301709971 chr13 93782550 93783423 + 8.54366301709971 NA intron (NM_009712, intron 1 of 7) intron (NM_009712, intron 1 of 7) -7791 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak2_39_125_0.940466615317216_7.44751323115852_8.54366301709971 chr2 126478322 126479207 + 8.54366301709971 NA intron (NM_001080944, intron 3 of 27) intron (NM_001080944, intron 3 of 27) 12789 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak1_39_125_0.940466615317216_7.44751323115852_8.54366301709971-2 chr9 115663850 115664291 + 8.54366301709971 NA Intergenic RLTR15|LTR|ERVK -245385 NM_028638 73748 Mm.485018 NM_028638 ENSMUSG00000056880 Gadl1 1110027M19Rik|ADC|CSADC glutamate decarboxylase-like 1 protein-coding common_peak1_20_221_-1.01694122255161_7.2859452550743_8.54278047249313 chr9 32708265 32708800 + 8.54278047249313 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 12490 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_225_2434_-0.267574247610947_11.1159189331642_8.54264825138783 chr10 42859643 42862761 + 8.54264825138783 NA intron (NM_172938, intron 1 of 8) intron (NM_172938, intron 1 of 8) 690 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak2_87_435_0.544838040289736_9.0406033449218_8.54118441852911 chr18 4920438 4922540 + 8.54118441852911 NA Intergenic Intergenic 109003 NR_045881 100038439 Mm.387569 NR_045881 ENSMUSG00000097043 Gm10556 ENSMUSG00000073646 predicted gene 10556 ncRNA common_peak1_125_1281_-0.375959075480603_10.1362010088784_8.53991544983894 chr8 72239399 72240832 + 8.53991544983894 NA promoter-TSS (NM_007456) promoter-TSS (NM_007456) -17 NM_007456 11767 Mm.290086 NM_007456 ENSMUSG00000003033 Ap1m1 AA408894|AP47|Adtm1A|Cltnm|mu1A adaptor-related protein complex AP-1, mu subunit 1 protein-coding common_peak1_45_158_0.85219015999551_7.73897803528211_8.53909728107571 chr12 21543053 21543864 + 8.53909728107571 NA Intergenic CpG -126022 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak2_273_3022_-0.23881539590649_11.4423575656745_8.53893591868056 chr19 5566528 5570027 + 8.53893591868056 NA 5' UTR (NM_001033448, exon 1 of 2) 5' UTR (NM_001033448, exon 1 of 2) 203 NM_001033448 381201 Mm.441906 NM_001033448 ENSMUSG00000049562 Ap5b1 Gm962 adaptor-related protein complex 5, beta 1 subunit protein-coding common_peak1_16_185_-1.13562255013386_6.9713475360411_8.53829094228462 chr3 154209374 154209735 + 8.53829094228462 NA intron (NM_001081263, intron 3 of 21) intron (NM_001081263, intron 3 of 21) 121006 NM_010713 16875 Mm.15530 NM_010713 ENSMUSG00000096225 Lhx8 L3|Lhx7 LIM homeobox protein 8 protein-coding common_peak1_16_185_-1.13562255013386_6.9713475360411_8.53829094228462-2 chr6 128621048 128621488 + 8.53829094228462 NA intron (NM_010737, intron 1 of 5) Lx8b|LINE|L1 1666 NM_001159902 17057 Mm.16729 NM_010737 ENSMUSG00000030361 Klrb1a Ly55a|NKR-P1.7|NKR-P1A|NKRP12|Nkrp1-a|Nkrp1a|ly-55A killer cell lectin-like receptor subfamily B member 1A protein-coding common_peak2_256_1963_0.270022434841984_11.0745904317357_8.53692658171945 chr9 56089033 56092334 + 8.53692658171945 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 707 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak1_41_416_-0.699816618459808_8.35399526421476_8.53571709165459 chr15 62037732 62038405 + 8.53571709165459 NA promoter-TSS (NR_003368) promoter-TSS (NR_003368) 82 NR_003368 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 plasmacytoma variant translocation 1 ncRNA common_peak1_43_435_-0.68177427089662_8.42729718932862_8.53528004826019 chr14 20793413 20794156 + 8.53528004826019 NA intron (NM_178597, intron 1 of 20) CpG 304 NM_001039138 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding common_peak1_19_211_-1.03678622693242_7.20952734109699_8.53437135161053 chr9 44361435 44361830 + 8.53437135161053 NA promoter-TSS (NM_027889) promoter-TSS (NM_027889) 38 NM_027889 71732 Mm.295013 NM_027889 ENSMUSG00000032127 Vps11 1200011A11Rik VPS11, CORVET/HOPS core subunit protein-coding common_peak1_53_531_-0.606462557475238_8.75205115676357_8.53393939083294 chr19 42779489 42780451 + 8.53393939083294 NA promoter-TSS (NM_019424) promoter-TSS (NM_019424) 6 NM_019424 192236 Mm.218381 NM_019424 ENSMUSG00000025188 Hps1 6030422N11Rik|BB405864|Gm21361|Hps|ep Hermansky-Pudlak syndrome 1 protein-coding unique_peak2_46_164_0.836808873180201_7.78472665083592_8.53366113720911 chr4 141951719 141953098 + 8.53366113720911 NA intron (NM_177868, intron 12 of 31) intron (NM_177868, intron 12 of 31) -30584 NR_040672 545691 Mm.332015 NR_040672 ENSMUSG00000085424 Fhad1os1 Gm13037|OTTMUSG00000010113 forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 1 ncRNA unique_peak1_20_37_1.52954713035491_6.01270107862104_8.53345030817094 chr11 11526629 11527092 + 8.53345030817094 NA Intergenic Intergenic 37594 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak1_20_37_1.52954713035491_6.01270107862104_8.53345030817094 chr10 117377682 117378053 + 8.53345030817094 NA promoter-TSS (NM_001013391) promoter-TSS (NM_001013391) -894 NM_001310609 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding unique_peak1_20_37_1.52954713035491_6.01270107862104_8.53345030817094-2 chr6 91156703 91157132 + 8.53345030817094 NA intron (NM_144919, intron 1 of 9) CpG 102 NM_144919 232232 Mm.206218 NM_144919 ENSMUSG00000034245 Hdac11 - histone deacetylase 11 protein-coding common_peak2_29_303_-0.839271080845882_7.82829197302064_8.53233144624735 chr9 88709419 88710903 + 8.53233144624735 NA intron (NM_001128601, intron 2 of 2) intron (NM_001128601, intron 2 of 2) 9637 NM_001128601 100039707 Mm.347377 NM_001128601 ENSMUSG00000079427 Mthfsl Gm2382 5, 10-methenyltetrahydrofolate synthetase-like protein-coding common_peak2_188_1994_-0.296429355004642_10.8139583536074_8.53195657025094 chr12 55079442 55081394 + 8.53195657025094 NA promoter-TSS (NM_028314) promoter-TSS (NM_028314) -78 NM_011899 24067 Mm.471968 NM_011899 ENSMUSG00000073079 Srp54a 54kDa|Srp54 signal recognition particle 54A protein-coding common_peak2_69_690_-0.524483874678369_9.17029996304908_8.53033322850047 chr8 95080935 95082617 + 8.53033322850047 NA intron (NM_028805, intron 1 of 19) intron (NM_028805, intron 1 of 19) 575 NM_028805 74187 Mm.28382 NM_028805 ENSMUSG00000031787 Katnb1 2410003J24Rik|KAT katanin p80 (WD40-containing) subunit B 1 protein-coding common_peak2_298_2405_0.245044791992267_11.3549433231722_8.52896882614488 chr2 166489992 166494470 + 8.52896882614488 NA Intergenic Intergenic 44780 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak2_298_2405_0.245044791992267_11.3549433231722_8.52896882614488-2 chr6 129044215 129050536 + 8.52896882614488 NA intron (NR_024262, intron 1 of 5) intron (NR_024262, intron 1 of 5) 1474 NR_024263 232408 Mm.259262 NM_153094 ENSMUSG00000030154 Klrb1f A630024B12Rik|Nkr-p1f|Nkrp1-f|Nkrp1f killer cell lectin-like receptor subfamily B member 1F protein-coding common_peak2_117_1194_-0.39065618663993_10.0274668095481_8.52533902580557 chr8 54445085 54448145 + 8.52533902580557 NA Intergenic Intergenic 83383 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak2_296_2384_0.245815429074574_11.3426812654302_8.52425814069923 chr9 77909534 77912440 + 8.52425814069923 NA Intergenic CpG -6378 NM_134255 68801 Mm.430736 NM_134255 ENSMUSG00000032349 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) protein-coding common_peak1_33_94_1.06029296382958_7.10000209024574_8.52372201676314 chr7 28778784 28779455 + 8.52372201676314 NA intron (NM_022432, intron 8 of 15) intron (NM_022432, intron 8 of 15) 2395 NR_040339 100503790 Mm.446894 NR_040339 Gm19897 - predicted gene, 19897 ncRNA common_peak2_170_1786_-0.314690683338032_10.6459785773725_8.52339499411849 chr2 39007224 39009819 + 8.52339499411849 NA intron (NM_028809, intron 1 of 3) intron (NM_028809, intron 1 of 3) 382 NM_028809 74192 Mm.38155 NM_028809 ENSMUSG00000026755 Arpc5l 2010015J01Rik|AI852867|ARC16-2|AW555592|AW742746 actin related protein 2/3 complex, subunit 5-like protein-coding common_peak1_52_521_-0.612164231126773_8.7218238810065_8.52332019260739 chr13 101539620 101540605 + 8.52332019260739 NA Intergenic Intergenic -142532 NR_046187 78136 Mm.399065 NR_046187 4922502H24Rik - RIKEN cDNA 4922502H24 gene ncRNA unique_peak1_16_23_1.81857376025302_5.49424938084766_8.52285284890288 chr10 39666159 39666567 + 8.52285284890288 NA intron (NR_038037, intron 2 of 2) intron (NR_038037, intron 2 of 2) 53429 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding unique_peak1_16_23_1.81857376025302_5.49424938084766_8.52285284890288-2 chr18 62046058 62046511 + 8.52285284890288 NA Intergenic Intergenic 93209 NM_172628 225608 Mm.262320 NM_172628 ENSMUSG00000045629 Sh3tc2 D430044G18Rik SH3 domain and tetratricopeptide repeats 2 protein-coding common_peak2_207_2218_-0.280435773997011_10.9754760651985_8.52095075026305 chr5 142919152 142922824 + 8.52095075026305 NA Intergenic Intergenic -14234 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak2_132_792_0.412723256958381_9.83753868418317_8.5186686166556 chr15 93397453 93399371 + 8.5186686166556 NA promoter-TSS (NM_175363) promoter-TSS (NM_175363) -52 NM_001285863 223828 Mm.74208 NM_146062 ENSMUSG00000036167 Pphln1 CR|HSPC206|HSPC232 periphilin 1 protein-coding common_peak2_155_991_0.371971761593699_10.1401821911837_8.51806493971615 chr14 66223064 66226729 + 8.51806493971615 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -11344 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_22_239_-0.968429791515009_7.42267569985101_8.51681292667006 chr1 88046132 88046742 + 8.51681292667006 NA Intergenic MTD|LTR|ERVL-MaLR -8974 NM_201641 394430 Mm.300095 NM_201641 ENSMUSG00000090165 Ugt1a10 A13|Ugt1a13 UDP glycosyltransferase 1 family, polypeptide A10 protein-coding common_peak1_22_239_-0.968429791515009_7.42267569985101_8.51681292667006-3 chr5 74531283 74531728 + 8.51681292667006 NA exon (NM_178672, exon 1 of 5) exon (NM_178672, exon 1 of 5) 237 NM_178672 212986 Mm.134147 NM_178672 ENSMUSG00000062110 Scfd2 E430013M20Rik|STXBP1L1 Sec1 family domain containing 2 protein-coding common_peak1_22_239_-0.968429791515009_7.42267569985101_8.51681292667006-2 chr4 141793016 141793591 + 8.51681292667006 NA promoter-TSS (NM_015733) promoter-TSS (NM_015733) -309 NM_015733 12371 Mm.88829 NM_015733 ENSMUSG00000028914 Casp9 AI115399|APAF-3|AW493809|CASP-9|Caspase-9|ICE-LAP6|Mch6 caspase 9 protein-coding common_peak1_394_4582_-0.191871892382675_12.066140624183_8.51640772008008 chr1 91060427 91064470 + 8.51640772008008 NA intron (NM_001310732, intron 1 of 24) intron (NM_001310732, intron 1 of 24) 9004 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_112_627_0.460898749280773_9.52507012353201_8.51620874486834 chr7 18883882 18885535 + 8.51620874486834 NA promoter-TSS (NM_009402) promoter-TSS (NM_009402) 18 NM_009402 21946 Mm.21855 NM_009402 ENSMUSG00000030413 Pglyrp1 PGRP|PGRP-S|Pglyrp|Tag7|Tasg7|Tnfsf3l peptidoglycan recognition protein 1 protein-coding unique_peak2_14_167_-1.21027330136741_6.78718077209505_8.51375041467369 chr10 120627274 120628240 + 8.51375041467369 NA Intergenic Intergenic -137975 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_238_1780_0.28263271299096_10.9397881575971_8.51336335897811 chr2 167491836 167493729 + 8.51336335897811 NA promoter-TSS (NM_170756) promoter-TSS (NM_170756) 92 NM_170756 263876 Mm.34342 NM_170756 ENSMUSG00000047030 Spata2 AI504642|mKIAA0757 spermatogenesis associated 2 protein-coding common_peak1_306_3436_-0.222742864472162_11.6355627041362_8.5131999366671 chr14 75176227 75179444 + 8.5131999366671 NA intron (NM_008879, intron 2 of 16) intron (NM_008879, intron 2 of 16) 41410 NM_008879 18826 Mm.153911 NM_008879 ENSMUSG00000021998 Lcp1 AW536232|D14Ertd310e|LCP-1|Pls2|pp65 lymphocyte cytosolic protein 1 protein-coding common_peak1_129_767_0.418564330798096_9.7942446661202_8.51227689783577-2 chr11 97817361 97819176 + 8.51227689783577 NA intron (NM_010688, intron 3 of 6) PB1D7|SINE|Alu 18596 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak1_129_767_0.418564330798096_9.7942446661202_8.51227689783577 chr10 93190207 93192171 + 8.51227689783577 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 28404 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak1_115_1172_-0.394099361143228_9.9989376174569_8.51156909629766 chr19 41365924 41367587 + 8.51156909629766 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 18315 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak2_96_969_-0.436502573711081_9.70358965021895_8.51071375435276 chr11 30181778 30184183 + 8.51071375435276 NA intron (NM_175836, intron 1 of 34) intron (NM_175836, intron 1 of 34) 15277 NM_009260 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak2_118_1204_-0.38774506087768_10.0409449006785_8.50944487582475 chr19 60933719 60936913 + 8.50944487582475 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 45567 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak2_127_1302_-0.371531171883898_10.1618557826262_8.5076071958195 chr13 112926431 112928516 + 8.5076071958195 NA promoter-TSS (NM_028151) promoter-TSS (NM_028151) -93 NM_028151 72198 Mm.291029 NM_028151 ENSMUSG00000016018 Skiv2l2 2610528A15Rik|mKIAA0052 superkiller viralicidic activity 2-like 2 (S. cerevisiae) protein-coding common_peak1_243_1831_0.278540285322739_10.9784739307583_8.50467520508075 chr11 78599872 78602500 + 8.50467520508075 NA intron (NM_008702, intron 3 of 10) intron (NM_008702, intron 3 of 10) -50451 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e transmembrane protein 97 protein-coding common_peak1_68_680_-0.528915667765277_9.14705315412943_8.50101308765317 chr5 121384641 121385730 + 8.50101308765317 NA intron (NM_172275, intron 1 of 11) intron (NM_172275, intron 1 of 11) 430 NM_001163470 231712 Mm.20488 NM_172275 ENSMUSG00000042726 Trafd1 1110008K06Rik|Fln29 TRAF type zinc finger domain containing 1 protein-coding common_peak2_441_4035_0.190443028129003_12.0739319731709_8.50037254522339 chr11 103261620 103268460 + 8.50037254522339 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 2361 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak1_30_312_-0.823336642198312_7.87835052583346_8.50016724369449-3 chr7 3646319 3647003 + 8.50016724369449 NA intron (NM_146176, intron 1 of 17) intron (NM_146176, intron 1 of 17) 1392 NM_146176 232791 Mm.358731 NM_146176 ENSMUSG00000035632 Cnot3 A930039N10Rik CCR4-NOT transcription complex, subunit 3 protein-coding common_peak1_30_312_-0.823336642198312_7.87835052583346_8.50016724369449 chr11 70436983 70437518 + 8.50016724369449 NA intron (NM_145429, intron 6 of 14) intron (NM_145429, intron 6 of 14) -1005 NR_106064 102465670 NR_106064 ENSMUSG00000099109 Mir7115 Gm27902|mmu-mir-7115 microRNA 7115 ncRNA common_peak1_30_312_-0.823336642198312_7.87835052583346_8.50016724369449-2 chr17 3260428 3261081 + 8.50016724369449 NA Intergenic Intergenic -65819 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak2_134_1379_-0.360139397947616_10.2503828526917_8.49969519058774 chr12 85984722 85987160 + 8.49969519058774 NA intron (NM_001081423, intron 29 of 33) intron (NM_001081423, intron 29 of 33) 93100 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak1_200_1407_0.315246597665709_10.6170549174702_8.49905956427443 chr12 72760562 72762190 + 8.49905956427443 NA 5' UTR (NM_008910, exon 1 of 6) 5' UTR (NM_008910, exon 1 of 6) 165 NM_008910 19042 Mm.261045 NM_008910 ENSMUSG00000021096 Ppm1a 2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1 protein phosphatase 1A, magnesium dependent, alpha isoform protein-coding common_peak2_275_2162_0.257001992657527_11.2073189462907_8.49684250456305 chr17 84877857 84882401 + 8.49684250456305 NA Intergenic Intergenic -76612 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak1_259_1995_0.267243137368348_11.0965175740214_8.49338051242242 chr4 3677654 3679432 + 8.49338051242242 NA intron (NM_010747, intron 1 of 12) CpG 422 NM_010747 17096 Mm.317331 NM_010747 ENSMUSG00000042228 Lyn AA407514|Hck-2|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding common_peak2_106_1074_-0.41115052512105_9.8645456819163_8.49233639587054 chr9 106885851 106888047 + 8.49233639587054 NA promoter-TSS (NM_175402) promoter-TSS (NM_175402) 51 NM_175402 109095 Mm.431589 NM_175402 ENSMUSG00000074102 Rbm15b 1810017N16Rik RNA binding motif protein 15B protein-coding common_peak1_24_53_1.33112768997292_6.42045134714993_8.49233081460466 chr13 41467670 41468176 + 8.49233081460466 NA intron (NM_001111324, intron 1 of 7) B4|SINE|B4 19437 NM_001111324 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_24_53_1.33112768997292_6.42045134714993_8.49233081460466-2 chr2 103641296 103641746 + 8.49233081460466 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 75211 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak1_292_3258_-0.228619973545715_11.5559036499657_8.49092858742214 chr11 116076313 116079151 + 8.49092858742214 NA TTS (NM_016852) TTS (NM_016852) 229 NM_001009573 70450 Mm.259460 NM_001009573 ENSMUSG00000057948 Unc13d 2610108D09Rik|Jinx|Munc13-4|mFLJ00067 unc-13 homolog D (C. elegans) protein-coding unique_peak1_13_14_2.15306184322305_4.98342151722004_8.4899773957265-3 chr14 32005803 32006211 + 8.4899773957265 NA Intergenic Intergenic -23096 NM_030166 78754 Mm.40681 NM_030166 ENSMUSG00000021903 Galnt15 4631401E18Rik|Galntl2|mpp-GalNAc-T15 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15 protein-coding unique_peak1_13_14_2.15306184322305_4.98342151722004_8.4899773957265-6 chr6 72868726 72869095 + 8.4899773957265 NA intron (NM_019715, intron 1 of 6) intron (NM_019715, intron 1 of 6) 31069 NM_019715 74287 Mm.29194 NM_019715 ENSMUSG00000055239 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 protein-coding unique_peak1_13_14_2.15306184322305_4.98342151722004_8.4899773957265-5 chr5 147757900 147758288 + 8.4899773957265 NA Intergenic B3|SINE|B2 -32106 NM_010228 14254 Mm.389712 NM_010228 ENSMUSG00000029648 Flt1 AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1 FMS-like tyrosine kinase 1 protein-coding unique_peak1_13_14_2.15306184322305_4.98342151722004_8.4899773957265-2 chr13 93884805 93885196 + 8.4899773957265 NA intron (NM_009712, intron 6 of 7) intron (NM_009712, intron 6 of 7) 94223 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA unique_peak1_13_14_2.15306184322305_4.98342151722004_8.4899773957265-4 chr2 62441152 62441526 + 8.4899773957265 NA Intergenic Intergenic -29108 NM_001159543 13482 Mm.1151 NM_010074 ENSMUSG00000035000 Dpp4 Cd26|Dpp-4|THAM dipeptidylpeptidase 4 protein-coding unique_peak1_13_14_2.15306184322305_4.98342151722004_8.4899773957265 chr10 86844694 86845111 + 8.4899773957265 NA intron (NM_138673, intron 67 of 68) intron (NM_138673, intron 67 of 68) 65897 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding unique_peak2_3_67_-2.24443420049788_4.9652457410014_8.48997739572649 chr8 69821769 69822360 + 8.48997739572649 NA promoter-TSS (NM_020028) promoter-TSS (NM_020028) -501 NM_020028 53978 Mm.23253 NM_020028 ENSMUSG00000031861 Lpar2 Edg4|IPA2|LPA2 lysophosphatidic acid receptor 2 protein-coding unique_peak2_21_229_-0.985692308250424_7.35264389681916_8.48824290561471-2 chr5 9014383 9016063 + 8.48824290561471 NA Intergenic (GGAGA)n|Simple_repeat|Simple_repeat -18077 NM_023733 74114 Mm.28197 NM_023733 ENSMUSG00000003623 Crot 1200003H03Rik carnitine O-octanoyltransferase protein-coding unique_peak2_21_229_-0.985692308250424_7.35264389681916_8.48824290561471 chr2 3737147 3738670 + 8.48824290561471 NA intron (NM_025626, intron 1 of 3) L1MB3|LINE|L1 24450 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_21_229_-0.985692308250424_7.35264389681916_8.48824290561471 chr4 11558212 11559056 + 8.48824290561471 NA promoter-TSS (NM_001256145) promoter-TSS (NM_001256145) -286 NM_001039556 623474 Mm.491200 NM_177285 ENSMUSG00000078773 Rad54b E130016E03Rik RAD54 homolog B (S. cerevisiae) protein-coding common_peak1_21_229_-0.985692308250424_7.35264389681916_8.48824290561471 chr3 88716944 88717394 + 8.48824290561471 NA intron (NM_001163310, intron 1 of 4) intron (NM_001163310, intron 1 of 4) 315 NM_001163310 19769 Mm.4009 NM_009069 ENSMUSG00000028057 Rit1 RIBB|ROC1|Rit Ras-like without CAAX 1 protein-coding common_peak1_21_229_-0.985692308250424_7.35264389681916_8.48824290561471-2 chr3 108017060 108017462 + 8.48824290561471 NA intron (NM_010358, intron 2 of 7) intron (NM_010358, intron 2 of 7) 712 NM_010358 14862 Mm.37199 NM_010358 ENSMUSG00000058135 Gstm1 Gstb-1|Gstb1 glutathione S-transferase, mu 1 protein-coding common_peak1_50_502_-0.62674381267807_8.66104268346649_8.48695117650756 chr7 66176025 66176764 + 8.48695117650756 NA Intergenic Intergenic 66879 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_50_502_-0.62674381267807_8.66104268346649_8.48695117650756-2 chr8 71950610 71951581 + 8.48695117650756 NA promoter-TSS (NM_001164581) promoter-TSS (NM_001164581) 29 NM_001164581 234413 Mm.334607 NM_001164581 ENSMUSG00000052446 Zfp961 A230105L22Rik|BC065788|mszf37|mszf55-2 zinc finger protein 961 protein-coding common_peak1_197_2099_-0.288106837552965_10.892120193777_8.48187537415031 chr8 26158171 26159549 + 8.48187537415031 NA intron (NM_199042, intron 1 of 2) CpG 691 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding common_peak1_35_104_1.0170521553929_7.22277159536257_8.48006032203483 chr15 96598519 96599113 + 8.48006032203483 NA intron (NM_134086, intron 4 of 15) intron (NM_134086, intron 4 of 15) 43146 NM_134086 105727 Mm.103568 NM_134086 ENSMUSG00000023169 Slc38a1 AA408026|AA409865|AL022800|AU015942|NAT2 solute carrier family 38, member 1 protein-coding common_peak1_23_247_-0.94042084229478_7.48398588923948_8.47989875626092-2 chr11 75598241 75598866 + 8.47989875626092 NA intron (NM_008850, intron 3 of 11) intron (NM_008850, intron 3 of 11) 1678 NR_110477 654359 Mm.439961 NR_110477 Gm12338 OTTMUSG00000006216 cytochrome c oxidase, subunit VIIc pseudogene pseudo common_peak1_23_247_-0.94042084229478_7.48398588923948_8.47989875626092 chr10 80656621 80657120 + 8.47989875626092 NA 5' UTR (NM_145361, exon 1 of 9) 5' UTR (NM_145361, exon 1 of 9) 201 NM_145361 208198 Mm.60720 NM_145361 ENSMUSG00000003344 Btbd2 2610037C03Rik|4930512K17Rik BTB (POZ) domain containing 2 protein-coding common_peak1_23_247_-0.94042084229478_7.48398588923948_8.47989875626092-3 chr9 65543074 65543539 + 8.47989875626092 NA Intergenic Intergenic 36781 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_36_368_-0.747693354848986_8.1536303286359_8.47778676605538 chr5 135777839 135778438 + 8.47778676605538 NA promoter-TSS (NM_008617) promoter-TSS (NM_008617) 163 NM_001289554 76571 Mm.247666 NM_029659 ENSMUSG00000019178 Styxl1 1700011C14Rik|Dusp24|Mkstyx serine/threonine/tyrosine interacting-like 1 protein-coding common_peak1_38_386_-0.72324630653655_8.23456660287614_8.47599005568578 chr5 104859654 104860461 + 8.47599005568578 NA promoter-TSS (NM_001039231) promoter-TSS (NM_001039231) 11 NM_001039231 626391 Mm.385405 NM_001039231 ENSMUSG00000072774 Zfp951 C230055K05Rik zinc finger protein 951 protein-coding common_peak1_47_472_-0.645308594060943_8.56304207630892_8.4754631993753 chr2 150645643 150646631 + 8.4754631993753 NA intron (NM_080575, intron 2 of 13) RMER15|LTR|ERVL -21357 NR_040331 109344 Mm.440012 NR_040331 ENSMUSG00000087406 E130215H24Rik - RIKEN cDNA E130215H24 gene ncRNA unique_peak1_22_45_1.4148988480365_6.23101138007526_8.47500176420424 chr14 48422578 48423051 + 8.47500176420424 NA Intergenic Intergenic -23309 NM_001310584 218989 Mm.85211 NM_172600 ENSMUSG00000036339 Tmem260 5930435P15|6720456H20Rik transmembrane protein 260 protein-coding unique_peak2_91_916_-0.449092497128831_9.61623167503064_8.47447751335648 chr18 12949124 12949489 + 8.47447751335648 NA Intergenic Intergenic -7465 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak1_31_321_-0.808051303803094_7.92689122621307_8.47362669176905 chr17 30336175 30336842 + 8.47362669176905 NA intron (NM_172618, intron 6 of 11) intron (NM_172618, intron 6 of 11) 59672 NR_030688 623169 Mm.440508 NR_030688 Gm6402 EG623169 ribosomal protein S17 pseudogene pseudo common_peak1_67_670_-0.5334080728533_9.12346491977353_8.47230199812639 chr16 24222101 24223262 + 8.47230199812639 NA Intergenic Intergenic -170669 NM_178665 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_150_947_0.379777136087293_10.0786318169419_8.47216804374118 chr12 111574216 111575447 + 8.47216804374118 NA promoter-TSS (NR_045295) promoter-TSS (NR_045295) 321 NM_022801 17169 Mm.260504 NM_021516 ENSMUSG00000007411 Mark3 1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10 MAP/microtubule affinity regulating kinase 3 protein-coding common_peak1_122_709_0.433902566826665_9.68862649780538_8.4682825533764 chr8 23256403 23257800 + 8.4682825533764 NA promoter-TSS (NM_001042484) promoter-TSS (NM_001042484) -21 NM_001042484 57437 Mm.196269 NM_020585 ENSMUSG00000015341 Golga7 AB041568|C130038N16Rik|GCP16|GOLGA3AP1|HSPC041|R75586 golgi autoantigen, golgin subfamily a, 7 protein-coding unique_peak1_15_20_1.90393584034641_5.34428534295196_8.46825542646517-3 chr9 44608564 44608969 + 8.46825542646517 NA intron (NM_181324, intron 2 of 13) B1F2|SINE|Alu 3874 NM_181324 13209 Mm.267061 NM_007841 ENSMUSG00000032097 Ddx6 1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein-coding common_peak1_15_20_1.90393584034641_5.34428534295196_8.46825542646517 chr2 101628086 101628498 + 8.46825542646517 NA intron (NM_009020, intron 2 of 2) intron (NM_009020, intron 2 of 2) 694 NM_026592 68170 Mm.31263 NM_026592 ENSMUSG00000027165 B230118H07Rik NWC RIKEN cDNA B230118H07 gene protein-coding unique_peak1_15_20_1.90393584034641_5.34428534295196_8.46825542646517 chr10 95313194 95313556 + 8.46825542646517 NA intron (NM_009950, intron 2 of 2) MER21B|LTR|ERVL 10722 NM_009950 12905 Mm.473739 NM_009950 ENSMUSG00000045867 Cradd RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding unique_peak1_15_20_1.90393584034641_5.34428534295196_8.46825542646517-2 chr3 103783375 103783869 + 8.46825542646517 NA intron (NM_001301304, intron 1 of 15) RMER6A|LTR|ERVK 7653 NM_001301306 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding common_peak2_136_1401_-0.356933077475764_10.2748040952727_8.46771300427594 chr8 122559867 122562436 + 8.46771300427594 NA Intergenic Intergenic -6864 NM_026014 67177 Mm.21873 NM_026014 ENSMUSG00000006585 Cdt1 2610318F11Rik|AW545653|C76791|Ris2 chromatin licensing and DNA replication factor 1 protein-coding unique_peak2_11_139_-1.34211986003923_6.45822308692535_8.46631870551508 chr15 36778894 36780097 + 8.46631870551508 NA intron (NM_001253805, intron 2 of 5) intron (NM_001253805, intron 2 of 5) 11437 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak2_76_357_0.59290576350881_8.78026865901866_8.46529815216048-2 chr18 70471498 70473143 + 8.46529815216048 NA promoter-TSS (NM_029019) promoter-TSS (NM_029019) -134 NM_029019 170461 Mm.83623 NM_029019 ENSMUSG00000079608 Stard6 1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424 StAR-related lipid transfer (START) domain containing 6 protein-coding common_peak2_76_357_0.59290576350881_8.78026865901866_8.46529815216048 chr14 121933238 121935513 + 8.46529815216048 NA intron (NM_026861, intron 4 of 8) intron (NM_026861, intron 4 of 8) -18601 NM_182806 110168 Mm.37405 NM_182806 ENSMUSG00000050350 Gpr18 - G protein-coupled receptor 18 protein-coding unique_peak2_28_293_-0.851009030323795_7.77416782967447_8.4615320450563 chr11 115698868 115700331 + 8.4615320450563 NA promoter-TSS (NM_001313937) promoter-TSS (NM_001313937) -65 NM_001313937 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding unique_peak2_25_266_-0.905274687046623_7.60805858816424_8.45903394859711 chr19 47050268 47051096 + 8.45903394859711 NA exon (NM_027654, exon 1 of 10) exon (NM_027654, exon 1 of 10) 224 NM_027654 71041 Mm.35413 NM_027654 ENSMUSG00000025050 Pcgf6 4933407A11Rik|AI604840|MBLR|Rnf134 polycomb group ring finger 6 protein-coding common_peak1_25_266_-0.905274687046623_7.60805858816424_8.45903394859711 chr10 82354156 82354584 + 8.45903394859711 NA Intergenic CpG -113095 NM_001105557 237411 NM_172789 ENSMUSG00000062931 Zfp938 B230315N10Rik zinc finger protein 938 protein-coding common_peak2_51_194_0.774703242077678_7.99468193478845_8.45901212991967 chr19 5117583 5118513 + 8.45901212991967 NA intron (NR_045528, intron 1 of 15) CpG 360 NR_045528 16594 Mm.271648 NM_008451 ENSMUSG00000024862 Klc2 8030455F02Rik|AW212649|KLC 2|KLC-2 kinesin light chain 2 protein-coding unique_peak2_10_131_-1.41120868785086_6.33878977543302_8.45867710722816-2 chr18 50014097 50015099 + 8.45867710722816 NA intron (NM_001177759, intron 1 of 1) intron (NM_001177759, intron 1 of 1) 35171 NM_001177759 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding unique_peak2_10_131_-1.41120868785086_6.33878977543302_8.45867710722816 chr17 9986209 9987340 + 8.45867710722816 NA Intergenic ORR1D1|LTR|ERVL-MaLR -210908 NR_045433 71092 Mm.243827 NR_045433 4930452A19Rik 4933424P20Rik RIKEN cDNA 4930452A19 gene ncRNA unique_peak2_4_77_-2.04749261360418_5.26165591206016_8.45797546399246 chr7 126779580 126780199 + 8.45797546399246 NA intron (NM_025347, intron 4 of 4) intron (NM_025347, intron 4 of 4) -1594 NM_011538 21389 Mm.727 NM_011538 ENSMUSG00000030699 Tbx6 rv T-box 6 protein-coding common_peak1_97_511_0.503488548097041_9.25174427404852_8.45688278789307 chr18 70621734 70623410 + 8.45688278789307 NA intron (NM_010773, intron 5 of 6) intron (NM_010773, intron 5 of 6) 54280 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak1_162_1693_-0.322373715410828_10.5650313016268_8.45682565730118 chr10 78296216 78298192 + 8.45682565730118 NA intron (NM_053014, intron 2 of 9) intron (NM_053014, intron 2 of 9) 43003 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA common_peak2_72_720_-0.511536422855194_9.23808723781323_8.45404718753811 chr2 3474067 3476032 + 8.45404718753811 NA promoter-TSS (NR_027509) promoter-TSS (NR_027509) -63 NR_027509 64707 Mm.23483 NM_022724 ENSMUSG00000026646 Suv39h2 4930507K23Rik|AA536750|D030054H19Rik|D2Ertd544e|KMT1B suppressor of variegation 3-9 homolog 2 (Drosophila) protein-coding common_peak1_53_530_-0.603748172778202_8.75069396441505_8.45245989162991 chr11 98400190 98400999 + 8.45245989162991 NA promoter-TSS (NM_001033537) promoter-TSS (NM_001033537) -104 NM_001033537 320655 Mm.86519 NM_001033537 ENSMUSG00000038208 Pgap3 CAB2|D430035D22Rik|Perld1 post-GPI attachment to proteins 3 protein-coding common_peak1_53_530_-0.603748172778202_8.75069396441505_8.45245989162991-2 chr5 93108696 93109747 + 8.45245989162991 NA intron (NM_001310669, intron 1 of 10) Charlie5|DNA|hAT-Charlie 15805 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_32_330_-0.793367459146338_7.97400367723405_8.45217720156472-2 chr8 90794899 90795437 + 8.45217720156472 NA Intergenic Intergenic -33667 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_32_330_-0.793367459146338_7.97400367723405_8.45217720156472 chr6 83121699 83122268 + 8.45217720156472 NA promoter-TSS (NM_001083923) promoter-TSS (NM_001083923) -522 NM_001083922 22377 Mm.1109 NM_016757 ENSMUSG00000030035 Wbp1 AI255152 WW domain binding protein 1 protein-coding common_peak2_153_1591_-0.333290768584227_10.4699792362515_8.45177348101831 chr19 8740586 8742726 + 8.45177348101831 NA promoter-TSS (NM_019829) promoter-TSS (NM_019829) -147 NM_019829 56389 Mm.153061 NM_019829 ENSMUSG00000010110 Stx5a 0610031F24Rik|D19Ertd627e|Stx5 syntaxin 5A protein-coding common_peak1_30_80_1.12683220184968_6.90326610380947_8.45139329055967 chr15 79413954 79414718 + 8.45139329055967 NA Intergenic Intergenic -11033 NM_172608 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak1_30_80_1.12683220184968_6.90326610380947_8.45139329055967-2 chr2 43772392 43772986 + 8.45139329055967 NA intron (NM_001301832, intron 1 of 14) intron (NM_001301832, intron 1 of 14) 23865 NM_001301831 76117 Mm.217350 NM_153820 ENSMUSG00000049744 Arhgap15 5830480G12Rik Rho GTPase activating protein 15 protein-coding common_peak1_43_434_-0.678461536855783_8.4256408223082_8.4453724975929 chr12 25339917 25340677 + 8.4453724975929 NA Intergenic B3A|SINE|B2 211123 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak2_41_415_-0.696352763156238_8.35226333656297_8.44380842134978 chr18 36759473 36760872 + 8.44380842134978 NA promoter-TSS (NM_026464) promoter-TSS (NM_026464) -67 NM_026464 67936 Mm.271719 NM_026464 ENSMUSG00000042660 Wdr55 2410080P20Rik|C80692 WD repeat domain 55 protein-coding common_peak1_91_466_0.524406686756562_9.12948208308794_8.44325950778359 chr14 57998651 57999469 + 8.44325950778359 NA exon (NM_028643, exon 1 of 12) exon (NM_028643, exon 1 of 12) 202 NM_028643 68514 Mm.26834 NM_028643 ENSMUSG00000021973 Micu2 1110008L20Rik|4833427E09Rik|AU041871|Efha1|Smhs2 mitochondrial calcium uptake 2 protein-coding common_peak2_108_1095_-0.406289847430891_9.89488715924508_8.44219579454622 chr17 56818122 56820714 + 8.44219579454622 NA intron (NM_027787, intron 1 of 17) intron (NM_027787, intron 1 of 17) 11590 NM_009056 19725 Mm.102 NM_009056 ENSMUSG00000024206 Rfx2 5430432H19Rik regulatory factor X, 2 (influences HLA class II expression) protein-coding common_peak2_108_1095_-0.406289847430891_9.89488715924508_8.44219579454622-2 chr7 19507552 19509458 + 8.44219579454622 NA promoter-TSS (NM_025960) promoter-TSS (NM_025960) -174 NM_177692 232946 Mm.64557 NM_177692 ENSMUSG00000057667 Bloc1s3 BC043666|Blos3|E230011O18|rp biogenesis of lysosomal organelles complex-1, subunit 3 protein-coding common_peak1_131_1345_-0.363918124576726_10.212503632322_8.44159759030439 chr19 5467258 5468749 + 8.44159759030439 NA intron (NM_009985, intron 1 of 9) intron (NM_009985, intron 1 of 9) 504 NM_009985 13041 Mm.113590 NM_009985 ENSMUSG00000024910 Ctsw lymphopain cathepsin W protein-coding common_peak1_142_1467_-0.347445906260786_10.3459132997128_8.4370671159633 chr4 11965663 11967088 + 8.4370671159633 NA promoter-TSS (NM_001033453) promoter-TSS (NM_001033453) 75 NM_001098230 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding common_peak1_58_580_-0.576867948362704_8.89396037922318_8.43497655830676 chr4 3660066 3661043 + 8.43497655830676 NA intron (NR_040643, intron 3 of 3) L1_Mus2|LINE|L1 4048 NR_040643 70143 Mm.417835 NR_040643 ENSMUSG00000085394 2210414B05Rik - RIKEN cDNA 2210414B05 gene ncRNA common_peak2_100_534_0.493453112316947_9.31012163744698_8.4326928816391 chr6 119901959 119903470 + 8.4326928816391 NA promoter-TSS (NM_011236) promoter-TSS (NM_011236) 16 NM_001166381 19365 Mm.149 NM_011236 ENSMUSG00000030166 Rad52 Rad52yh RAD52 homolog, DNA repair protein protein-coding common_peak1_119_1214_-0.384859543522728_10.0543108267318_8.43245835297498 chr19 60889570 60890994 + 8.43245835297498 NA 5' UTR (NM_018869, exon 1 of 16) 5' UTR (NM_018869, exon 1 of 16) 533 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak2_67_296_0.642441762546117_8.53554000207382_8.43218601779848 chr11 17051333 17053074 + 8.43218601779848 NA exon (NM_029861, exon 1 of 3) exon (NM_029861, exon 1 of 3) 269 NM_029861 380686 Mm.425666 NM_029861 ENSMUSG00000044629 Cnrip1 1500041B16Rik|3110054C06Rik|5330437A18Rik|AI854501|C2orf32 cannabinoid receptor interacting protein 1 protein-coding common_peak2_67_296_0.642441762546117_8.53554000207382_8.43218601779848-2 chr11 67577888 67579849 + 8.43218601779848 NA intron (NM_008088, intron 1 of 13) ID_B1|SINE|B4 -7632 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_210_2251_-0.276391772941267_10.9987952256096_8.43204909611491 chr1 164455786 164459628 + 8.43204909611491 NA intron (NM_009721, intron 1 of 5) CpG 648 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding common_peak2_225_2431_-0.265795704084827_11.1150296614012_8.42808911954343 chr7 92668187 92670691 + 8.42808911954343 NA exon (NM_029078, exon 1 of 16) exon (NM_029078, exon 1 of 16) 473 NM_029078 74737 Mm.288645 NM_029078 ENSMUSG00000041328 Pcf11 2500001H09Rik|5730417B17Rik|C77803 PCF11 cleavage and polyadenylation factor subunit protein-coding common_peak2_63_269_0.672662288447048_8.41314674127436_8.42625033842552 chr11 116429230 116430816 + 8.42625033842552 NA Intergenic B1_Mur2|SINE|Alu -4071 NM_176902 319370 Mm.258466 NM_176902 ENSMUSG00000050628 Ubald2 1110014K08Rik|D030012E24Rik|Fam100b UBA-like domain containing 2 protein-coding common_peak2_80_386_0.570152326848469_8.88126591956864_8.42539057911298 chr5 30231862 30233374 + 8.42539057911298 NA promoter-TSS (NM_027652) promoter-TSS (NM_027652) 0 NM_027652 28042 Mm.168854 NM_027652 ENSMUSG00000075703 Selenoi 4933402G07Rik|AI448296|AI452230|C79563|D5Wsu178e|Ept1|SELI|mKIAA1724 selenoprotein I protein-coding common_peak2_47_170_0.822535264392553_7.82912014708218_8.42497800113986 chr16 17759113 17760267 + 8.42497800113986 NA promoter-TSS (NM_145479) promoter-TSS (NM_145479) 69 NM_145479 224023 Mm.282807 NM_145479 ENSMUSG00000022750 Klhl22 2610318I18Rik|Kelchl kelch-like 22 protein-coding common_peak1_304_2473_0.239995252948921_11.3926274114508_8.42480719737519 chr16 36934064 36937253 + 8.42480719737519 NA intron (NM_008225, intron 1 of 13) intron (NM_008225, intron 1 of 13) 675 NM_008225 15163 Mm.4091 NM_008225 ENSMUSG00000022831 Hcls1 AW213261|HS1 hematopoietic cell specific Lyn substrate 1 protein-coding common_peak1_192_2039_-0.2915481444126_10.8485793646526_8.42309427474016 chr11 106215693 106217788 + 8.42309427474016 NA promoter-TSS (NM_026009) promoter-TSS (NM_026009) -186 NM_028074 72047 Mm.41367 NM_028074 ENSMUSG00000020705 Ddx42 1810047H21Rik|AW319508|AW556242|B430002H05Rik|RHELP|RNAHP|SF3b125 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 protein-coding common_peak2_34_348_-0.765637511686119_8.06426447036659_8.4227383961872 chr15 12216117 12217724 + 8.4227383961872 NA intron (NM_172958, intron 1 of 15) intron (NM_172958, intron 1 of 15) 11826 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak1_34_348_-0.765637511686119_8.06426447036659_8.4227383961872 chr6 129917813 129918530 + 8.4227383961872 NA Intergenic Intergenic -4947 NM_008463 16636 Mm.14111 NM_008463 ENSMUSG00000030173 Klra5 Ly49e killer cell lectin-like receptor, subfamily A, member 5 protein-coding common_peak1_61_609_-0.559370916529586_8.97297997418546_8.42201470985035 chr2 157130861 157131745 + 8.42201470985035 NA intron (NM_001139520, intron 1 of 16) intron (NM_001139520, intron 1 of 16) 3919 NM_001139520 56045 Mm.248478 NM_018851 ENSMUSG00000027639 Samhd1 E330031J07Rik|Mg11 SAM domain and HD domain, 1 protein-coding common_peak1_278_2195_0.254288898035675_11.227806788023_8.42078323637351 chr11 75335825 75338001 + 8.42078323637351 NA intron (NM_026653, intron 4 of 16) MTEa|LTR|ERVL-MaLR 11470 NM_001164223 68275 Mm.102574 NM_026653 ENSMUSG00000000751 Rpa1 5031405K23Rik|70kDa|AA589576|AW557552|RF-A|RP-A|Rpa replication protein A1 protein-coding common_peak2_129_1323_-0.367160575287965_10.1871071191632_8.41856290190711 chrX 159675426 159679817 + 8.41856290190711 NA intron (NM_001135727, intron 1 of 17) intron (NM_001135727, intron 1 of 17) -30980 NM_021389 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak2_181_1229_0.334514753679802_10.4316999770665_8.41804776563236 chr7 119894933 119896827 + 8.41804776563236 NA promoter-TSS (NM_001163703) promoter-TSS (NM_001163703) 19 NM_001285960 73919 Mm.46381 NM_029610 ENSMUSG00000030922 Lyrm1 1110065L10Rik|2310004B22Rik|4930404J24Rik LYR motif containing 1 protein-coding common_peak1_20_220_-1.01042791559293_7.28268860159496_8.4175135533651 chr14 36952380 36952952 + 8.4175135533651 NA intron (NM_027045, intron 1 of 10) Lx9|LINE|L1 16098 NM_027045 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding common_peak1_73_729_-0.505356691369613_9.25907430808257_8.41711301180328 chr9 53247264 53248190 + 8.41711301180328 NA intron (NM_029936, intron 1 of 17) intron (NM_029936, intron 1 of 17) 385 NM_029936 77591 Mm.133560 NM_029936 ENSMUSG00000053289 Ddx10 4632415A01Rik|AI646054 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 protein-coding common_peak2_148_1533_-0.338157765395312_10.4140038848053_8.41700958644556 chr9 107871814 107873590 + 8.41700958644556 NA 5' UTR (NM_011251, exon 1 of 21) 5' UTR (NM_011251, exon 1 of 21) 117 NM_011251 19654 Mm.139926 NM_011251 ENSMUSG00000032582 Rbm6 4930506F14Rik|Def-3|NY-LU-12|g16|mKIAA4015 RNA binding motif protein 6 protein-coding common_peak2_243_1833_0.276966149824629_10.9792609985074_8.41681861203321 chr5 142370368 142372943 + 8.41681861203321 NA Intergenic Intergenic -29842 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf forkhead box K1 protein-coding common_peak2_145_905_0.385564097525751_10.0161492888091_8.41666962565645 chr8 123211842 123213513 + 8.41666962565645 NA promoter-TSS (NM_177279) promoter-TSS (NM_177279) 111 NM_145606 234852 Mm.41596 NM_145606 ENSMUSG00000000743 Chmp1a 2900018H07Rik|Pcoln3 charged multivesicular body protein 1A protein-coding common_peak1_244_1843_0.276358883359666_10.9868023821092_8.4165050863553 chr18 35737865 35740468 + 8.4165050863553 NA exon (NM_028261, exon 4 of 8) exon (NM_028261, exon 4 of 8) 1388 NM_001289592 72512 Mm.45995 NM_028261 ENSMUSG00000024349 Tmem173 2610307O08Rik|ERIS|MPYS|Mita|STING transmembrane protein 173 protein-coding common_peak1_110_613_0.461823321994517_9.49300650636744_8.41572080766891 chr1 43474099 43475443 + 8.41572080766891 NA intron (NM_010879, intron 1 of 4) intron (NM_010879, intron 1 of 4) 29020 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak2_179_1887_-0.303239789424497_10.7310231546496_8.41509738626726 chr10 128367308 128369959 + 8.41509738626726 NA intron (NM_001081040, intron 1 of 4) CpG 1404 NM_001081040 210582 Mm.296876 NM_001081040 ENSMUSG00000039914 Coq10a Gm1 coenzyme Q10A protein-coding common_peak2_123_1257_-0.37700937977227_10.1084115169932_8.41497820004308 chr9 64252279 64254497 + 8.41497820004308 NA 5' UTR (NM_008927, exon 1 of 11) 5' UTR (NM_008927, exon 1 of 11) 217 NM_008927 26395 Mm.248907 NM_008927 ENSMUSG00000004936 Map2k1 MAPKK1|MEKK1|Mek1|Prkmk1 mitogen-activated protein kinase kinase 1 protein-coding common_peak1_123_1257_-0.37700937977227_10.1084115169932_8.41497820004308 chr12 85985279 85986839 + 8.41497820004308 NA intron (NM_001081423, intron 29 of 33) intron (NM_001081423, intron 29 of 33) 92982 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak1_37_115_0.968995519455675_7.34247875485541_8.41448146505168 chr1 195091802 195092475 + 8.41448146505168 NA exon (NM_010778, exon 1 of 11) exon (NM_010778, exon 1 of 11) 110 NR_132621 17221 Mm.12884 NM_010778 ENSMUSG00000016493 Cd46 Mcp CD46 antigen, complement regulatory protein protein-coding common_peak1_221_1613_0.294105615273271_10.8034776709144_8.41314559454011 chr17 84003107 84005318 + 8.41314559454011 NA intron (NR_130994, intron 1 of 1) MLT1J-int|LTR|ERVL-MaLR 5660 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak2_189_1304_0.325248010004321_10.5124580964594_8.41311565391094 chr16 8737132 8739586 + 8.41311565391094 NA promoter-TSS (NM_001003918) promoter-TSS (NM_001003918) -17 NM_001003918 252870 Mm.295330 NM_001003918 ENSMUSG00000022710 Usp7 2210010O09Rik|AA409944|AA617399|AU019296|AW548146|C80752|Hausp ubiquitin specific peptidase 7 protein-coding common_peak1_66_289_0.650634610134789_8.50522639508233_8.41174475916077-2 chr17 83989896 83990985 + 8.41174475916077 NA Intergenic MIRb|SINE|MIR -8112 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak1_66_289_0.650634610134789_8.50522639508233_8.41174475916077-3 chr2 128196443 128197491 + 8.41174475916077 NA Intergenic Intergenic 69392 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak1_66_289_0.650634610134789_8.50522639508233_8.41174475916077 chr12 102338689 102339804 + 8.41174475916077 NA intron (NM_001161365, intron 3 of 9) intron (NM_001161365, intron 3 of 9) 55605 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_66_289_0.650634610134789_8.50522639508233_8.41174475916077-4 chr4 43669217 43669848 + 8.41174475916077 NA promoter-TSS (NM_175517) promoter-TSS (NM_175517) 561 NM_001085508 242409 Mm.171489 NM_001085508 ENSMUSG00000078716 Tmem8b 4930500O05Rik transmembrane protein 8B protein-coding unique_peak2_12_148_-1.29035958700758_6.57398872695837_8.40957910633622 chr15 52565288 52566477 + 8.40957910633622 NA Intergenic Intergenic -146563 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding unique_peak1_21_41_1.46748031991519_6.12605758273636_8.40775876249104 chr3 69179326 69179947 + 8.40775876249104 NA Intergenic ORR1A4|LTR|ERVL-MaLR -42783 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding common_peak1_24_256_-0.919609357057495_7.54581987066513_8.40737268210854 chr1 164068717 164069218 + 8.40737268210854 NA exon (NM_001164059, exon 5 of 8) exon (NM_001164059, exon 5 of 8) 6891 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak1_113_637_0.453698416971662_9.5442618222507_8.4065583477582 chr1 21322097 21324183 + 8.4065583477582 NA Intergenic MMERVK9E_I-int|LTR|ERVK -24828 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo common_peak2_100_1009_-0.4232913840337_9.76849388562231_8.4062831858056 chr13 113103418 113106274 + 8.4062831858056 NA Intergenic L1MB7|LINE|L1 -3865 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak1_240_2612_-0.255639914065371_11.2236714522873_8.40441773180611 chr11 118246995 118248704 + 8.40441773180611 NA intron (NM_011180, intron 1 of 12) CpG 743 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_94_489_0.511831851272641_9.19255386463889_8.40431131568767 chr17 6079273 6080453 + 8.40431131568767 NA promoter-TSS (NM_001111017) promoter-TSS (NM_001111017) 35 NM_181392 66467 Mm.303441 NM_181392 ENSMUSG00000034345 Gtf2h5 2700017P07Rik|2810432H05Rik|D17Wsu155e general transcription factor IIH, polypeptide 5 protein-coding common_peak1_31_85_1.09660081960943_6.97456516450681_8.40182362809682 chr11 118152659 118153002 + 8.40182362809682 NA Intergenic Intergenic -23611 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak1_101_542_0.489474700509451_9.32954573805909_8.3994666258212 chr11 70562327 70563659 + 8.3994666258212 NA 5' UTR (NM_001045959, exon 1 of 32) 5' UTR (NM_001045959, exon 1 of 32) 112 NM_016713 50932 Mm.42967 NM_016713 ENSMUSG00000020827 Mink1 B55|MINK|Map4k6|Ysk2 misshapen-like kinase 1 (zebrafish) protein-coding common_peak1_122_710_0.431872031599294_9.68964176541906_8.39793870839642 chr5 139483511 139484527 + 8.39793870839642 NA intron (NM_001159908, intron 1 of 6) PB1D10|SINE|Alu 472 NM_133349 100494 Mm.24521 NM_133349 ENSMUSG00000053581 Zfand2a AA407930|AU016206|Airap zinc finger, AN1-type domain 2A protein-coding common_peak1_30_311_-0.818720014127942_7.87604221179828_8.39454387575017-2 chr5 113985782 113986450 + 8.39454387575017 NA intron (NM_198109, intron 2 of 14) intron (NM_198109, intron 2 of 14) 7641 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot homolog 1 (Drosophila) protein-coding common_peak1_30_311_-0.818720014127942_7.87604221179828_8.39454387575017 chr12 33160600 33161227 + 8.39454387575017 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 13227 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_27_283_-0.863182369486756_7.7181559347613_8.39427230253055 chr2 120403468 120404088 + 8.39427230253055 NA promoter-TSS (NM_172672) promoter-TSS (NM_172672) -118 NM_172672 76051 Mm.38851 NM_172672 ENSMUSG00000062646 Ganc 5830445O15Rik|9330160A12|mFLJ00088 glucosidase, alpha; neutral C protein-coding common_peak2_190_2015_-0.292908417513122_10.8308257147434_8.39096501993657 chrX 71364048 71368408 + 8.39096501993657 NA intron (NM_001313706, intron 1 of 15) intron (NM_001313706, intron 1 of 15) 1468 NM_001313706 53332 Mm.219672 NM_016985 ENSMUSG00000015214 Mtmr1 AW049210 myotubularin related protein 1 protein-coding common_peak2_79_379_0.574503241672542_8.85710722916722_8.38967748733358 chr11 29373016 29374464 + 8.38967748733358 NA promoter-TSS (NM_176841) promoter-TSS (NM_176841) -432 NM_176841 108686 Mm.338284 NM_176841 ENSMUSG00000032740 Ccdc88a A430106J12Rik|AI848406|Ape|C130096N06Rik|C330012F17Rik|D130005J21Rik|Girdin|Giv|Grdn|Hkrp1 coiled coil domain containing 88A protein-coding common_peak1_86_862_-0.460418918513103_9.5230072899224_8.38849982810281 chr11 17211427 17212214 + 8.38849982810281 NA promoter-TSS (NM_025443) promoter-TSS (NM_025443) -73 NM_178909 103784 Mm.298132 NM_178909 ENSMUSG00000078970 Wdr92 AI553587|HZGJ WD repeat domain 92 protein-coding common_peak1_492_5911_-0.167034997039153_12.4459130556266_8.38807380406505 chr5 23415692 23419577 + 8.38807380406505 NA Intergenic Intergenic 16719 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak1_214_1545_0.299508153207423_10.7440786805286_8.38707390336386 chr8 94011636 94013274 + 8.38707390336386 NA exon (NM_011787, exon 1 of 14) exon (NM_011787, exon 1 of 14) 185 NM_011787 23802 Mm.34641 NM_011787 ENSMUSG00000031751 Amfr gp78 autocrine motility factor receptor protein-coding common_peak1_156_1002_0.367369743793468_10.1537907625089_8.38686555419554 chr2 156729969 156731311 + 8.38686555419554 NA intron (NM_001042487, intron 1 of 6) intron (NM_001042487, intron 1 of 6) 9361 NM_001042487 228836 Mm.22094 NM_146128 ENSMUSG00000061689 Dlgap4 AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16 discs, large homolog-associated protein 4 (Drosophila) protein-coding common_peak1_66_658_-0.533590954858328_9.09733917757889_8.3861207421136 chr11 70762139 70763329 + 8.3861207421136 NA Intergenic ORR1D-int|LTR|ERVL-MaLR -1713 NM_177565 193043 Mm.40966 NM_177565 ENSMUSG00000043602 Zfp3 AI854635|B230309J24|Fnp-1|Zfp-3 zinc finger protein 3 protein-coding common_peak2_303_2463_0.240026907447414_11.3867999944186_8.38555663134196 chr17 71001021 71003515 + 8.38555663134196 NA 5' UTR (NM_026064, exon 1 of 4) 5' UTR (NM_026064, exon 1 of 4) 265 NM_026064 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak2_54_539_-0.595524578664916_8.77905330771837_8.3848270410322 chr8 84004238 84005575 + 8.3848270410322 NA promoter-TSS (NR_106191) promoter-TSS (NR_106191) -722 NR_106191 102466886 NR_106191 ENSMUSG00000098823 Mir8111 Gm27823|mmu-mir-8111 microRNA 8111 ncRNA unique_peak2_7_104_-1.64460456572731_5.89194323480247_8.38160594043258 chr13 117047797 117048519 + 8.38160594043258 NA Intergenic Intergenic -22642 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding common_peak1_36_367_-0.743778304845602_8.15167280363421_8.3805073794732 chr7 38215594 38216466 + 8.3805073794732 NA Intergenic L1M2|LINE|L1 11964 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding unique_peak1_18_30_1.64616789301002_5.77728025689188_8.37926274899872-4 chr19 38396021 38396345 + 8.37926274899872 NA exon (NM_175507, exon 1 of 3) exon (NM_175507, exon 1 of 3) 203 NM_175507 240660 Mm.262085 NM_175507 ENSMUSG00000044026 Slc35g1 AA590464|D330039I19Rik|Tmem20 solute carrier family 35, member G1 protein-coding unique_peak1_18_30_1.64616789301002_5.77728025689188_8.37926274899872-3 chr16 33584036 33584528 + 8.37926274899872 NA intron (NM_134251, intron 4 of 12) intron (NM_134251, intron 4 of 12) 65687 NM_001083902 171286 Mm.35253 NM_134251 ENSMUSG00000035506 Slc12a8 CCC9|E330020C02Rik solute carrier family 12 (potassium/chloride transporters), member 8 protein-coding unique_peak1_18_30_1.64616789301002_5.77728025689188_8.37926274899872-2 chr14 15747290 15747668 + 8.37926274899872 NA Intergenic Intergenic -308492 NM_146052 218763 Mm.138039 NM_146052 ENSMUSG00000045201 Lrrc3b BC019794|LRP15 leucine rich repeat containing 3B protein-coding unique_peak1_18_30_1.64616789301002_5.77728025689188_8.37926274899872 chr12 8583621 8584208 + 8.37926274899872 NA intron (NM_177802, intron 1 of 6) RLTR6-int|LTR|ERV1 15152 NM_177802 328059 Mm.46326 NM_177802 ENSMUSG00000020600 Slc7a15 Arpat solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 protein-coding common_peak1_15_175_-1.16317835551213_6.87784244088123_8.37908360489743 chr18 49979207 49979665 + 8.37908360489743 NA promoter-TSS (NM_001177760) promoter-TSS (NM_001177760) 9 NM_001177759 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding common_peak2_167_1101_0.351403068786409_10.2816100429644_8.3785129613454 chr15 73747365 73749438 + 8.3785129613454 NA 5' UTR (NM_008975, exon 1 of 6) 5' UTR (NM_008975, exon 1 of 6) 375 NM_008975 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak1_59_589_-0.569302400465144_8.91991994401663_8.37797734601233 chr2 122145335 122146416 + 8.37797734601233 NA intron (NM_026251, intron 2 of 17) RSINE1|SINE|B4 -1812 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding common_peak1_274_2154_0.255924451287775_11.2014343796203_8.3764828967205 chr14 49065369 49067321 + 8.3764828967205 NA promoter-TSS (NM_144535) promoter-TSS (NM_144535) -150 NM_144535 74385 Mm.379235 NM_144535 ENSMUSG00000036291 Ap5m1 4932432K03Rik|Mu5|Mudeng adaptor-related protein complex 5, mu 1 subunit protein-coding common_peak2_157_1011_0.365717827605362_10.165852488497_8.37531319609274 chr5 121659948 121661450 + 8.37531319609274 NA promoter-TSS (NM_028037) promoter-TSS (NM_028037) 136 NM_001289543 72399 Mm.153372 NM_028227 ENSMUSG00000029458 Brap 3010002G07Rik|BRAP2|IMP BRCA1 associated protein protein-coding common_peak1_132_1355_-0.361241150473983_10.2245208878994_8.37371794847808 chr4 133168685 133170654 + 8.37371794847808 NA intron (NM_153423, intron 1 of 8) intron (NM_153423, intron 1 of 8) -25986 NR_105984 102466215 NR_105984 ENSMUSG00000099202 Mir7017 Gm27945|mmu-mir-7017 microRNA 7017 ncRNA common_peak2_244_1844_0.275576722841247_10.9871934623684_8.37289077306938 chr9 44482141 44485008 + 8.37289077306938 NA Intergenic Intergenic -15562 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak1_44_442_-0.664984250990386_8.45867076305982_8.37254677231828 chr8 123114093 123114760 + 8.37254677231828 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -2948 NM_170684 102278 Mm.36434 NM_170684 ENSMUSG00000034796 Cpne7 AW047065 copine VII protein-coding common_peak2_58_238_0.704659597061077_8.25319660651129_8.36972352546966 chr9 98986322 98987213 + 8.36972352546966 NA intron (NM_011810, intron 1 of 4) CpG 394 NM_011810 23873 Mm.74605 NM_011810 ENSMUSG00000032463 Faim - Fas apoptotic inhibitory molecule protein-coding common_peak1_81_810_-0.475502527965491_9.42580684023453_8.36954149321923 chr11 23007744 23008796 + 8.36954149321923 NA Intergenic CpG -5117 NM_028672 73873 Mm.252406 NM_028672 ENSMUSG00000049811 Fam161a 4930430E16Rik family with sequence similarity 161, member A protein-coding common_peak2_195_2073_-0.288099319529829_10.8741505190483_8.36668528500884 chr2 152827953 152831837 + 8.36668528500884 NA exon (NM_001289717, exon 2 of 3) exon (NM_001289717, exon 2 of 3) 822 NM_001289716 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_112_629_0.456311479785121_9.52736375827984_8.36665007536262 chr13 67525376 67526671 + 8.36665007536262 NA intron (NM_133228, intron 1 of 3) intron (NM_133228, intron 1 of 3) 208 NM_133228 170763 Mm.491205 NM_133228 ENSMUSG00000097333 Zfp87 2210039O17Rik|4631412O18Rik|KRAB4|Mzf22|Zfp72 zinc finger protein 87 protein-coding common_peak1_76_358_0.588881506950015_8.78228078729806_8.3665696175899 chr13 111686027 111687228 + 8.3665696175899 NA intron (NM_172593, intron 1 of 12) CpG 449 NM_172593 218613 Mm.31012 NM_172593 ENSMUSG00000032727 Mier3 5730509D14|AU015422|D130064H19Rik MIER family member 3 protein-coding common_peak2_57_231_0.717294630571353_8.21662831041325_8.36630007643328 chr9 37612939 37614372 + 8.36630007643328 NA promoter-TSS (NM_011449) promoter-TSS (NM_011449) 65 NM_011449 20686 Mm.8637 NM_011449 ENSMUSG00000001948 Spa17 Sp17 sperm autoantigenic protein 17 protein-coding common_peak1_250_1906_0.270708352501243_11.0324433045634_8.36624360727405 chr19 4332269 4334697 + 8.36624360727405 NA intron (NM_001001984, intron 12 of 20) intron (NM_001001984, intron 12 of 20) -27261 NM_001290818 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak1_41_137_0.895562498206686_7.55630570588151_8.36486728456686 chr2 170153241 170154040 + 8.36486728456686 NA Intergenic Intergenic -10965 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_257_1978_0.265918100546077_11.0835149473206_8.3647745795565 chr3 152148766 152152867 + 8.3647745795565 NA intron (NM_016867, intron 1 of 5) RSINE1|SINE|B4 15084 NM_016867 54120 Mm.97 NM_016867 ENSMUSG00000039131 Gipc2 2200002N01Rik|AU021850|Semcap2 GIPC PDZ domain containing family, member 2 protein-coding common_peak1_42_423_-0.682193284309248_8.38682381240858_8.36477075018637 chr4 120569479 120570303 + 8.36477075018637 NA intron (NM_016748, intron 1 of 18) CpG 385 NM_016748 51797 Mm.1815 NM_016748 ENSMUSG00000028633 Ctps Ctps1 cytidine 5'-triphosphate synthase protein-coding common_peak1_163_1065_0.356676164678962_10.2363298050987_8.36407602465337 chr3 107630801 107632539 + 8.36407602465337 NA promoter-TSS (NM_153563) promoter-TSS (NM_153563) 40 NM_153563 229707 Mm.278643 NM_153563 ENSMUSG00000014601 Strip1 6330569M22Rik|6530401O14Rik|Fam40a striatin interacting protein 1 protein-coding common_peak1_292_2345_0.24560636516434_11.3187904806107_8.36360106128955 chr8 57511717 57513355 + 8.36360106128955 NA intron (NM_008252, intron 1 of 4) CpG 693 NM_008252 97165 Mm.276881 NM_008252 ENSMUSG00000054717 Hmgb2 C80539|HMG-2|Hmg2 high mobility group box 2 protein-coding common_peak1_39_395_-0.711610081262478_8.27355157944837_8.35949017571797 chrX 159254635 159255395 + 8.35949017571797 NA promoter-TSS (NM_148945) promoter-TSS (NM_148945) -767 NM_148945 110651 Mm.328476 NM_148945 ENSMUSG00000031309 Rps6ka3 MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2 ribosomal protein S6 kinase polypeptide 3 protein-coding unique_peak1_25_58_1.27277819527909_6.51903214700139_8.35752856676016 chr12 70227251 70227736 + 8.35752856676016 NA promoter-TSS (NR_045174) promoter-TSS (NR_045174) 190 NM_133198 110095 Mm.256926 NM_133198 ENSMUSG00000021069 Pygl - liver glycogen phosphorylase protein-coding common_peak2_141_871_0.391587532256446_9.96397809090515_8.35742953766123 chr9 66059329 66061054 + 8.35742953766123 NA promoter-TSS (NM_011149) promoter-TSS (NM_011149) 22 NM_011149 19035 Mm.335249 NM_011149 ENSMUSG00000032383 Ppib AA408962|AA553318|AI844835|Cphn-2|Cphn2|CyP-20b peptidylprolyl isomerase B protein-coding common_peak2_68_678_-0.524672443997938_9.14493154224576_8.35736439974682 chr1 184047940 184049995 + 8.35736439974682 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 14506 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak2_43_433_-0.675141178564171_8.42398064316239_8.3558504781436 chr19 5786397 5788011 + 8.3558504781436 NA Intergenic B3|SINE|B2 15467 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak1_43_433_-0.675141178564171_8.42398064316239_8.3558504781436 chrX 73715610 73716349 + 8.3558504781436 NA promoter-TSS (NM_007435) promoter-TSS (NM_007435) 225 NM_012060 27061 Mm.17 NM_012060 ENSMUSG00000002015 Bcap31 Bap31 B cell receptor associated protein 31 protein-coding unique_peak2_5_86_-1.88239265012934_5.50174717078406_8.35307075932251-3 chr3 138489612 138490290 + 8.35307075932251 NA promoter-TSS (NM_175224) promoter-TSS (NM_175224) -569 NM_175224 75624 Mm.26833 NM_175224 ENSMUSG00000005813 Metap1 1700029C17Rik|AW047992|mKIAA0094 methionyl aminopeptidase 1 protein-coding unique_peak2_5_86_-1.88239265012934_5.50174717078406_8.35307075932251-2 chr16 44313235 44313990 + 8.35307075932251 NA intron (NM_198034, intron 1 of 24) intron (NM_198034, intron 1 of 24) 19226 NM_198034 320007 Mm.242144 NM_198034 ENSMUSG00000022696 Sidt1 AW045928|B830021E24Rik SID1 transmembrane family, member 1 protein-coding unique_peak2_5_86_-1.88239265012934_5.50174717078406_8.35307075932251 chr13 87353081 87353784 + 8.35307075932251 NA Intergenic IAPEz-int|LTR|ERVK -1306637 NM_007749 12867 Mm.378898 NM_007749 ENSMUSG00000017778 Cox7c COXVIIc|Cox7c1 cytochrome c oxidase subunit VIIc protein-coding common_peak1_28_292_-0.84609353990968_7.77171008446741_8.35286468457262 chr2 28179684 28180183 + 8.35286468457262 NA Intergenic Intergenic -13160 NM_001038613 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding common_peak1_41_414_-0.692880571249432_8.35052724060957_8.35229997299615 chr12 25338040 25338717 + 8.35229997299615 NA Intergenic Intergenic 209204 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak2_41_414_-0.692880571249432_8.35052724060957_8.35229997299615-2 chrX 75033935 75036606 + 8.35229997299615 NA intron (NM_181584, intron 1 of 9) intron (NM_181584, intron 1 of 9) 49635 NM_181584 210710 Mm.267056 NM_181584 ENSMUSG00000032750 Gab3 5930433H21Rik growth factor receptor bound protein 2-associated protein 3 protein-coding unique_peak2_41_414_-0.692880571249432_8.35052724060957_8.35229997299615 chr13 21168171 21170363 + 8.35229997299615 NA Intergenic Intergenic -10664 NM_009054 19720 Mm.314056 NM_009054 ENSMUSG00000021326 Trim27 AW538890|Gm19403|Rfp tripartite motif-containing 27 protein-coding common_peak2_227_1674_0.28777796169039_10.8538343610777_8.35107971738484 chr19 60579369 60581990 + 8.35107971738484 NA exon (NM_001172096, exon 1 of 8) exon (NM_001172096, exon 1 of 8) 344 NM_001172097 78832 Mm.259026 NM_030197 ENSMUSG00000033417 Cacul1 2700078E11Rik|2810417M16Rik|9830127L17Rik|AI450346|D130033C15Rik CDK2 associated, cullin domain 1 protein-coding unique_peak2_18_201_-1.0578472793549_7.12928784307434_8.35078777415022 chr15 80739226 80740679 + 8.35078777415022 NA intron (NM_144812, intron 1 of 24) intron (NM_144812, intron 1 of 24) 28639 NM_144812 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak1_176_1184_0.338989577409487_10.3801661324904_8.35030684897525 chr10 6979140 6980934 + 8.35030684897525 NA intron (NM_001302795, intron 4 of 5) intron (NM_001302795, intron 4 of 5) 428 NM_001170800 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak2_102_1030_-0.41828073359137_9.80068825057242_8.3498539569078 chr1 161808436 161810592 + 8.3498539569078 NA Intergenic Lx9|LINE|L1 -21019 NM_010177 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_124_1266_-0.373080030126106_10.1206607940778_8.34953044170897 chr15 79955070 79956606 + 8.34953044170897 NA Intergenic RMER17B2|LTR|ERVK -23192 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak1_200_1410_0.312175943705741_10.6185902444501_8.34915252387829 chr9 115308942 115310558 + 8.34915252387829 NA intron (NM_024222, intron 1 of 15) CpG 671 NM_024222 68292 Mm.296158 NM_024222 ENSMUSG00000032437 Stt3b 1300006C19Rik|Simp STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) protein-coding common_peak1_107_1083_-0.406716852141564_9.87879061528309_8.34886852004918 chr3 88831000 88832171 + 8.34886852004918 NA intron (NR_015498, intron 1 of 1) intron (NR_015498, intron 1 of 1) 902 NR_015498 319830 Mm.400394 NR_015498 1500004A13Rik 5430404N14Rik|BB132176 RIKEN cDNA 1500004A13 gene ncRNA common_peak1_317_2616_0.232790383734716_11.4700934009154_8.34856589530363 chr9 119321746 119323682 + 8.34856589530363 NA promoter-TSS (NR_045693) promoter-TSS (NR_045693) -287 NM_133985 108737 Mm.293565 NM_133985 ENSMUSG00000036737 Oxsr1 2210022N24Rik|2810422B09Rik|AI462649|AW209236|Osr1|mKIAA1101 oxidative-stress responsive 1 protein-coding common_peak1_229_2477_-0.261781769982418_11.1440695871494_8.34507543225604 chr14 16242803 16244903 + 8.34507543225604 NA intron (NM_027695, intron 1 of 2) ID_B1|SINE|B4 -5461 NM_021504 59007 Mm.258381 NM_021504 ENSMUSG00000021785 Ngly1 1110002C09Rik|PNGase|Png1 N-glycanase 1 protein-coding common_peak1_184_1258_0.329826670370714_10.4629759029044_8.34502849696146 chr5 115533793 115536195 + 8.34502849696146 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) -24473 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak1_146_915_0.381806964967025_10.0301072705805_8.33925144248463 chr4 46596837 46599402 + 8.33925144248463 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) 3810 NM_001164804 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak2_155_1611_-0.328467956547394_10.4904020502543_8.3386689875071 chr5 122395637 122399084 + 8.3386689875071 NA intron (NM_019824, intron 2 of 6) intron (NM_019824, intron 2 of 6) 5432 NM_019824 56378 Mm.275942 NM_019824 ENSMUSG00000029465 Arpc3 1110006A04Rik|p21-ARC|p21-Ar|p21Arc actin related protein 2/3 complex, subunit 3 protein-coding common_peak2_56_225_0.724319757134985_8.18233884098268_8.33812021735217 chr9 80164454 80165511 + 8.33812021735217 NA promoter-TSS (NM_001039546) promoter-TSS (NM_001039546) -52 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding common_peak1_56_225_0.724319757134985_8.18233884098268_8.33812021735217 chr5 36553167 36554024 + 8.33812021735217 NA intron (NM_001113362, intron 3 of 14) intron (NM_001113362, intron 3 of 14) -22972 NM_001113364 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding common_peak1_542_5284_0.165654075359599_12.4505147939498_8.33780876459334 chr1 134062460 134066376 + 8.33780876459334 NA Intergenic Intergenic 14737 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding unique_peak2_6_95_-1.75162237307594_5.70915131418319_8.33774493939074 chr17 35342400 35343004 + 8.33774493939074 NA exon (NM_010392, exon 2 of 7) exon (NM_010392, exon 2 of 7) 369 NM_010392 15013 Mm.427969 NM_010392 ENSMUSG00000091705 H2-Q2 BE136769|ENSMUSG00000079507|Gm11132|H-2Q2|gs14-2 histocompatibility 2, Q region locus 2 protein-coding common_peak1_298_3329_-0.223840742790282_11.5893860905635_8.33731777599906 chr3 96244370 96246728 + 8.33731777599906 NA promoter-TSS (NM_178212) promoter-TSS (NM_178212) 52 NM_013549 15267 Mm.5220 NM_013549 ENSMUSG00000064220 Hist2h2aa1 AI448581|H2a-614|H2a-615|Hist2 histone cluster 2, H2aa1 protein-coding common_peak1_56_558_-0.582205753293017_8.83560159619668_8.33708023700965 chr14 70780896 70782044 + 8.33708023700965 NA Intergenic Intergenic 7089 NM_010071 13449 Mm.243323 NM_010071 ENSMUSG00000022102 Dok2 DokR|Frip docking protein 2 protein-coding common_peak1_56_558_-0.582205753293017_8.83560159619668_8.33708023700965-2 chr16 17404959 17405879 + 8.33708023700965 NA promoter-TSS (NM_023348) promoter-TSS (NM_023348) -581 NM_023348 67474 Mm.271992 NM_023348 ENSMUSG00000022765 Snap29 1300018G05Rik|AI891940|AU020222|BB131856|Gs32 synaptosomal-associated protein 29 protein-coding common_peak1_185_1955_-0.296261622878287_10.7855598435131_8.33525225393199 chr12 55079645 55081186 + 8.33525225393199 NA promoter-TSS (NM_028314) promoter-TSS (NM_028314) -81 NM_011899 24067 Mm.471968 NM_011899 ENSMUSG00000073079 Srp54a 54kDa|Srp54 signal recognition particle 54A protein-coding unique_peak2_33_338_-0.774992890975817_8.01764501764844_8.33433276186351 chr17 46483511 46485095 + 8.33433276186351 NA 5' UTR (NM_001162864, exon 2 of 15) 5' UTR (NM_001162864, exon 2 of 15) 3372 NM_001162864 106763 Mm.297613 NM_175351 ENSMUSG00000015599 Ttbk1 AU017937|AW048023|C330008L01Rik tau tubulin kinase 1 protein-coding common_peak2_33_95_1.04518607143937_7.10755553644084_8.33405613567999 chr14 25467383 25468215 + 8.33405613567999 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 8614 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_113_638_0.451438909789536_9.54539157584176_8.33266034441011 chr10 75666840 75668319 + 8.33266034441011 NA intron (NM_172549, intron 29 of 36) CpG -23571 NM_027890 71733 Mm.247956 NM_027890 ENSMUSG00000006342 Susd2 1200011D11Rik sushi domain containing 2 protein-coding common_peak2_147_923_0.381259232168066_10.0423786575001_8.33202935588504 chr17 79019487 79021416 + 8.33202935588504 NA intron (NM_029239, intron 1 of 18) CpG 365 NM_001171004 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding common_peak1_241_2622_-0.25382293644318_11.2300906240434_8.33088560679696 chr19 25051539 25053949 + 8.33088560679696 NA intron (NM_028785, intron 2 of 47) intron (NM_028785, intron 2 of 47) 53215 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak1_269_2103_0.258006475611969_11.1679222270983_8.33049493157558 chr15 98870647 98872852 + 8.33049493157558 NA promoter-TSS (NM_001033276) promoter-TSS (NM_001033276) -544 NM_001033276 381022 Mm.264889 NM_001033276 ENSMUSG00000048154 Kmt2d ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4 lysine (K)-specific methyltransferase 2D protein-coding common_peak2_241_1815_0.27663066853089_10.9648638215564_8.32996100280275 chrX 12133140 12137649 + 8.32996100280275 NA intron (NR_045434, intron 3 of 3) intron (NR_045434, intron 3 of 3) 24952 NR_045434 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_64_277_0.65797344760939_8.4479277965282_8.32960333579359 chr1 193262037 193262975 + 8.32960333579359 NA intron (NM_008288, intron 1 of 6) MIR3|SINE|MIR 1539 NM_008288 15483 Mm.28328 NM_008288 ENSMUSG00000016194 Hsd11b1 - hydroxysteroid 11-beta dehydrogenase 1 protein-coding common_peak1_64_277_0.65797344760939_8.4479277965282_8.32960333579359-2 chr12 56345191 56346090 + 8.32960333579359 NA intron (NM_145442, intron 1 of 8) CpG 254 NM_145442 217588 Mm.25656 NM_145442 ENSMUSG00000021028 Mbip 4933408E06Rik MAP3K12 binding inhibitory protein 1 protein-coding common_peak1_108_1093_-0.403654787262921_9.8935696291611_8.32915597067384 chr10 67537436 67538388 + 8.32915597067384 NA promoter-TSS (NM_010118) promoter-TSS (NM_010118) 43 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding common_peak2_103_1040_-0.415108486285773_9.81620011015653_8.32737113612787 chr14 70765526 70768242 + 8.32737113612787 NA promoter-TSS (NM_023045) promoter-TSS (NM_023045) -256 NM_023045 65246 Mm.152987 NM_023045 ENSMUSG00000022100 Xpo7 4930506C02Rik|BB164534|Ranbp16|mKIAA0745 exportin 7 protein-coding common_peak1_94_945_-0.437226583064183_9.6670830818073_8.3243668473064 chr10 61694855 61696482 + 8.3243668473064 NA promoter-TSS (NR_073587) promoter-TSS (NR_073587) 82 NR_073587 71767 Mm.71514 NM_027912 ENSMUSG00000020087 Tysnd1 1300019N10Rik trypsin domain containing 1 protein-coding common_peak1_34_347_-0.761497781325195_8.06219460518613_8.3230859645268 chr7 127215409 127216087 + 8.3230859645268 NA exon (NM_017461, exon 8 of 11) exon (NM_017461, exon 8 of 11) 2697 NM_017461 54204 Mm.18 NM_017461 ENSMUSG00000000486 Sept1 Diff6|Pnutl3 septin 1 protein-coding common_peak2_331_2771_0.226018949403848_11.5497210168391_8.32057822426957 chr9 103107850 103112920 + 8.32057822426957 NA Intergenic RMER30|DNA|hAT-Charlie -1689 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding common_peak1_90_903_-0.447833919695141_9.59626200256762_8.31961847838478 chr4 135169278 135170409 + 8.31961847838478 NA intron (NM_019732, intron 4 of 5) intron (NM_019732, intron 4 of 5) 49198 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding unique_peak2_29_301_-0.829748306727375_7.82353058596139_8.31814250374246 chr11 98728823 98729599 + 8.31814250374246 NA intron (NM_011869, intron 1 of 25) intron (NM_011869, intron 1 of 25) 224 NM_011869 23989 Mm.246493 NM_011869 ENSMUSG00000017210 Med24 911GSE|AU040102|AW547152|D11Ertd307e|DRIP100|Gse2|Pparb2|Pparbp2|R75526|Thrap4|Trap100 mediator complex subunit 24 protein-coding common_peak1_136_1398_-0.353842690629895_10.2732589018498_8.31765500464049 chr17 25791698 25793411 + 8.31765500464049 NA promoter-TSS (NM_001285984) promoter-TSS (NM_001285984) -160 NM_145410 214917 Mm.26783 NM_145410 ENSMUSG00000057411 Fam173a - family with sequence similarity 173, member A protein-coding common_peak1_88_445_0.532118468843883_9.06695913434225_8.315063340386 chr6 134700344 134701698 + 8.315063340386 NA intron (NM_026371, intron 3 of 3) intron (NM_026371, intron 3 of 3) 60081 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding common_peak1_225_2428_-0.264014965277106_11.1141392919973_8.31426026489602 chr10 4387131 4388778 + 8.31426026489602 NA 5' UTR (NM_001033466, exon 1 of 3) 5' UTR (NM_001033466, exon 1 of 3) 154 NM_001033466 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding common_peak2_339_2860_0.222562687902023_11.5935851262742_8.31393257534533 chr13 60894407 60898675 + 8.31393257534533 NA intron (NM_001145801, intron 2 of 3) intron (NM_001145801, intron 2 of 3) 906 NM_007797 13025 Mm.30144 NM_007797 ENSMUSG00000074874 Ctla2b AW545568|Ctla-2b cytotoxic T lymphocyte-associated protein 2 beta protein-coding common_peak2_34_100_1.02323423177174_7.16982859863766_8.31326918883823 chr2 75762586 75763393 + 8.31326918883823 NA Intergenic Intergenic -58326 NM_010902 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak1_77_769_-0.489158874788046_9.34413519818824_8.31262597115993 chr6 113672612 113674220 + 8.31262597115993 NA intron (NM_001113553, intron 5 of 11) MLT1A|LTR|ERVL-MaLR -24083 NM_001033463 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak2_77_769_-0.489158874788046_9.34413519818824_8.31262597115993 chr7 66097198 66099937 + 8.31262597115993 NA Intergenic ID4|SINE|ID -10948 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_50_189_0.777815168796509_7.9587631927292_8.31097341729218 chr19 31909473 31910685 + 8.31097341729218 NA intron (NM_001081074, intron 3 of 11) intron (NM_001081074, intron 3 of 11) 41318 NM_001081074 69865 Mm.87538 NM_001081074 ENSMUSG00000052595 A1cf 1810073H04Rik|ACF64|ACF65|ASP|Acf|MCM|MerCreMer|Tg(Myh6-cre/Esr1*)1Jmk|mer APOBEC1 complementation factor protein-coding common_peak2_50_189_0.777815168796509_7.9587631927292_8.31097341729218-2 chr7 30664411 30665573 + 8.31097341729218 NA promoter-TSS (NM_027999) promoter-TSS (NM_027999) 2 NM_027999 71909 Mm.290410 NM_027999 ENSMUSG00000078762 Haus5 2310022K01Rik HAUS augmin-like complex, subunit 5 protein-coding common_peak1_117_1190_-0.385818981635932_10.0250482070461_8.30829751692528 chr17 52147669 52149281 + 8.30829751692528 NA Intergenic Intergenic 265748 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA common_peak2_230_1705_0.284454125608059_10.8786289941223_8.30013687074228 chr6 50454139 50456883 + 8.30013687074228 NA intron (NM_001163645, intron 1 of 21) CpG 659 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_230_1705_0.284454125608059_10.8786289941223_8.30013687074228 chr18 34330630 34331822 + 8.30013687074228 NA promoter-TSS (NM_025527) promoter-TSS (NM_025527) 81 NM_025527 66384 Mm.29452 NM_025527 ENSMUSG00000014504 Srp19 2310020D23Rik signal recognition particle 19 protein-coding common_peak1_35_105_1.00337721849582_7.22960906381111_8.29983141735763 chr15 77894648 77895345 + 8.29983141735763 NA Intergenic Intergenic 33998 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding unique_peak2_10_130_-1.40023757002985_6.33330421652252_8.29851431327519 chr9 123077879 123078779 + 8.29851431327519 NA intron (NM_026917, intron 6 of 6) intron (NM_026917, intron 6 of 6) 34876 NM_026917 69035 Mm.28300 NM_026917 ENSMUSG00000025786 Zdhhc3 1110020O22Rik|1810006O10Rik|2210017C02Rik|DHHC-3|GODZ|Gramp1|Zfp373 zinc finger, DHHC domain containing 3 protein-coding common_peak1_71_707_-0.509695565837617_9.21275776716419_8.29550527611729 chr5 130028983 130029873 + 8.29550527611729 NA intron (NM_007761, intron 1 of 5) CpG 122 NM_007761 12909 Mm.18072 NM_007761 ENSMUSG00000025532 Crcp AL022669 calcitonin gene-related peptide-receptor component protein protein-coding common_peak1_321_3621_-0.21396160640483_11.7155900277478_8.2936803239347 chr13 37618903 37622167 + 8.2936803239347 NA Intergenic Intergenic -205503 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_20_219_-1.00388506972616_7.27941717866158_8.29290466096296 chr14 60716763 60717366 + 8.29290466096296 NA intron (NM_001033272, intron 4 of 12) B2_Mm1t|SINE|B2 -15840 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak2_170_1130_0.345250021713639_10.3160082248466_8.29284093065468 chr17 48417148 48419960 + 8.29284093065468 NA TTS (NM_009694) TTS (NM_009694) 8554 NM_207219 106821 Mm.203943 NM_207219 ENSMUSG00000040771 Oard1 AI314976|AW558560 O-acyl-ADP-ribose deacylase 1 protein-coding common_peak1_115_1168_-0.389171277646374_9.99647357570847_8.29270315245626 chr4 129335468 129336593 + 8.29270315245626 NA promoter-TSS (NM_025970) promoter-TSS (NM_025970) 4 NM_025970 67106 Mm.36575 NM_025970 ENSMUSG00000057572 Zbtb8os 2010001H09Rik|2310028N13Rik|AI851226|Arch|Archm zinc finger and BTB domain containing 8 opposite strand protein-coding common_peak1_107_1082_-0.40538533839602_9.87812485841032_8.29227850373064 chr2 29060016 29061224 + 8.29227850373064 NA intron (NM_009442, intron 1 of 11) CpG 357 NM_009442 22130 Mm.252195 NM_009442 ENSMUSG00000026803 Ttf1 AV245725|TTF-1|TTF-I transcription termination factor, RNA polymerase I protein-coding common_peak2_76_758_-0.4912345346424_9.32233880809427_8.28930172228506 chr19 34921136 34923108 + 8.28930172228506 NA promoter-TSS (NM_183046) promoter-TSS (NM_183046) -236 NM_183046 240641 Mm.278471 NM_183046 ENSMUSG00000024795 Kif20b 33cex|B130024C23|C330014J10Rik|Mphosph1|magoo kinesin family member 20B protein-coding common_peak1_54_213_0.739824031984769_8.11137900239353_8.28686847531705-2 chr8 13642363 13643438 + 8.28686847531705 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 34687 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_54_213_0.739824031984769_8.11137900239353_8.28686847531705 chr19 46736818 46737732 + 8.28686847531705 NA intron (NM_020577, intron 10 of 10) intron (NM_020577, intron 10 of 10) -24334 NM_033569 94219 Mm.306903 NM_033569 ENSMUSG00000064105 Cnnm2 AU015877|AW048635|Acdp2|Clp2 cyclin M2 protein-coding common_peak2_44_441_-0.6617239218268_8.45704059847803_8.28422011186754 chr2 28178969 28180281 + 8.28422011186754 NA Intergenic B4A|SINE|B4 -13468 NM_001038613 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding common_peak1_27_282_-0.858093492813957_7.7156114964249_8.28419358504788 chr4 126468167 126468663 + 8.28419358504788 NA promoter-TSS (NM_153403) promoter-TSS (NM_153403) 6 NM_153403 236511 Mm.30800 NM_153403 ENSMUSG00000041530 Ago1 Eif2c1 argonaute RISC catalytic subunit 1 protein-coding common_peak1_47_171_0.814123024576354_7.83332626699027_8.28333002586013 chr9 63731029 63731986 + 8.28333002586013 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 26487 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_135_1386_-0.354378877790362_10.2605626334284_8.28269848529989 chr7 67529634 67532784 + 8.28269848529989 NA intron (NM_175124, intron 8 of 9) intron (NM_175124, intron 8 of 9) 114027 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak1_207_2212_-0.276529557601011_10.9735229570005_8.28210680543426 chr7 92668479 92669955 + 8.28210680543426 NA intron (NM_029078, intron 1 of 15) CpG 695 NM_029078 74737 Mm.288645 NM_029078 ENSMUSG00000041328 Pcf11 2500001H09Rik|5730417B17Rik|C77803 PCF11 cleavage and polyadenylation factor subunit protein-coding common_peak1_128_1309_-0.365489410017579_10.172606391416_8.28201999466419 chr15 89075156 89076921 + 8.28201999466419 NA promoter-TSS (NM_026485) promoter-TSS (NM_026485) -26 NM_026485 67976 Mm.284710 NM_026485 ENSMUSG00000015363 Trabd 5730502D15Rik|AL023039 TraB domain containing protein-coding common_peak1_52_518_-0.603848962914769_8.7176662469005_8.27772732445909 chr1 156040564 156041512 + 8.27772732445909 NA intron (NM_022329, intron 1 of 1) intron (NM_022329, intron 1 of 1) 177 NM_022329 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding common_peak2_57_567_-0.574471493805756_8.8625113726018_8.27717221332021 chr9 96896391 96898019 + 8.27717221332021 NA Intergenic ORR1B1|LTR|ERVL-MaLR -7731 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding common_peak2_83_409_0.551219166665765_8.95508968283833_8.27512874446555 chr1 69686092 69688273 + 8.27512874446555 NA Intergenic Intergenic -1222 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding common_peak1_42_422_-0.678786682865999_8.38512051168695_8.27455464578534 chr9 63741650 63742874 + 8.27455464578534 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 15732 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_355_3041_0.215438553412405_11.6785237144307_8.27286458079617 chr12 55491997 55494028 + 8.27286458079617 NA promoter-TSS (NM_010907) promoter-TSS (NM_010907) -365 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak1_302_2455_0.238887864388563_11.3815387775645_8.27108528994119 chr4 154159290 154161609 + 8.27108528994119 NA exon (NM_026388, exon 1 of 4) exon (NM_026388, exon 1 of 4) 235 NM_026388 67808 Mm.288737 NM_026388 ENSMUSG00000029030 Tprgl 1200015A19Rik|Svap30|Tprg1l|mover transformation related protein 63 regulated like protein-coding common_peak1_409_3663_0.196957375033158_11.9376824756135_8.27092707713528 chr15 76272579 76275669 + 8.27092707713528 NA intron (NM_028852, intron 1 of 4) intron (NM_028852, intron 1 of 4) -4285 NR_045747 100038659 Mm.448549 NR_045747 Mirt2 ENSMUSG00000075583|Gm10872|Gm24562 myocardial infraction associated transcript 2 ncRNA common_peak2_409_3663_0.196957375033158_11.9376824756135_8.27092707713528 chr2 165849970 165855836 + 8.27092707713528 NA intron (NM_001291158, intron 2 of 23) ORR1E|LTR|ERVL-MaLR 5270 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_151_960_0.371808516182208_10.0942968788649_8.26973256227244 chr12 101912351 101913696 + 8.26973256227244 NA 5' UTR (NM_028446, exon 1 of 21) 5' UTR (NM_028446, exon 1 of 21) 148 NM_028446 109181 Mm.208618 NM_028446 ENSMUSG00000021188 Trip11 2610511G22Rik|3110031G15Rik|6030460N08Rik|AI450776|GMAP-210|TRIP230 thyroid hormone receptor interactor 11 protein-coding common_peak2_489_4625_0.17604458433917_12.2635718428058_8.26799067009356 chr10 68275825 68283516 + 8.26799067009356 NA promoter-TSS (NM_023598) promoter-TSS (NM_023598) -944 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_43_432_-0.671813160846417_8.42231663430352_8.26671542840406 chr5 113868507 113869325 + 8.26671542840406 NA intron (NM_011779, intron 2 of 10) B4|SINE|B4 -38415 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak1_173_1158_0.340745290845737_10.3490374964293_8.26622065146754 chr8 90954625 90956066 + 8.26622065146754 NA intron (NM_001310530, intron 1 of 37) intron (NM_001310530, intron 1 of 37) 23096 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_16_183_-1.12002569508284_6.96354910851559_8.26610214027901 chr16 91413384 91413926 + 8.26610214027901 NA intron (NM_008349, intron 3 of 6) intron (NM_008349, intron 3 of 6) 7420 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding common_peak1_16_183_-1.12002569508284_6.96354910851559_8.26610214027901-2 chr5 114667187 114667580 + 8.26610214027901 NA Intergenic Intergenic -8962 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding common_peak1_82_819_-0.469974230337098_9.4444929843369_8.26570339190779 chr8 77548911 77549986 + 8.26570339190779 NA promoter-TSS (NM_001081240) promoter-TSS (NM_001081240) 51 NM_001081240 102182 Mm.197630 NM_178903 ENSMUSG00000037134 Prmt9 AI931714|Prmt10 protein arginine methyltransferase 9 protein-coding common_peak2_86_860_-0.457071596730991_9.52133362903135_8.26163952618562 chr11 80183196 80185333 + 8.26163952618562 NA intron (NM_028019, intron 1 of 4) intron (NM_028019, intron 1 of 4) 392 NM_028019 71956 Mm.22985 NM_028019 ENSMUSG00000020707 Rnf135 0610037N03Rik|2410006N06Rik ring finger protein 135 protein-coding common_peak2_210_1508_0.30122224861228_10.7099882148328_8.26106113645868 chr14 66187855 66192112 + 8.26106113645868 NA intron (NM_172498, intron 3 of 29) intron (NM_172498, intron 3 of 29) 23569 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_17_27_1.69733043981506_5.65602014196514_8.2600809554031-2 chr9 106199834 106200320 + 8.2600809554031 NA promoter-TSS (NM_026447) promoter-TSS (NM_026447) -844 NM_026447 67905 Mm.23018 NM_026447 ENSMUSG00000020253 Ppm1m 2810423O19Rik|AW610647|C77250|PP2Ceta protein phosphatase 1M protein-coding common_peak1_17_27_1.69733043981506_5.65602014196514_8.2600809554031 chr8 25133161 25133584 + 8.2600809554031 NA Intergenic MTC|LTR|ERVL-MaLR 25861 NR_106187 102467006 NR_106187 ENSMUSG00000099142 Mir8108 Gm27484|mmu-mir-8108 microRNA 8108 ncRNA unique_peak1_17_27_1.69733043981506_5.65602014196514_8.2600809554031 chr11 83063393 83063752 + 8.2600809554031 NA Intergenic RLTR49|LTR|ERVK -1540 NM_011408 20556 Mm.278689 NM_011408 ENSMUSG00000072620 Slfn2 Shlf2 schlafen 2 protein-coding unique_peak1_17_27_1.69733043981506_5.65602014196514_8.2600809554031-2 chr7 72272486 72272935 + 8.2600809554031 NA intron (NM_001024703, intron 1 of 22) L1_Mus1|LINE|L1 33885 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak2_92_923_-0.440932320528468_9.63128288115182_8.2596965273885 chr8 69996522 69997508 + 8.2596965273885 NA promoter-TSS (NM_145596) promoter-TSS (NM_145596) -631 NM_145596 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_12_147_-1.28064443217437_6.56913114954176_8.25886356515631 chr6 100833186 100833589 + 8.25886356515631 NA promoter-TSS (NM_182939) promoter-TSS (NM_182939) -251 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak1_88_881_-0.451616476793333_9.55882660716085_8.25837632727871 chr19 4125741 4126719 + 8.25837632727871 NA promoter-TSS (NM_016666) promoter-TSS (NM_016666) 270 NM_025889 66990 Mm.276255 NM_025889 Tmem134 2410001H17Rik|AI463452 transmembrane protein 134 protein-coding unique_peak2_4_76_-2.02887693543684_5.25234807297648_8.25328851274555 chr4 136021804 136022455 + 8.25328851274555 NA promoter-TSS (NM_013736) promoter-TSS (NM_013736) -480 NM_013736 27224 Mm.27663 NM_013736 ENSMUSG00000028668 Eloa 110kDa|AA408125|Tceb3|Tceb3a elongin A protein-coding common_peak2_287_3188_-0.22775377563417_11.5250114944352_8.25251198725966 chr19 7205243 7208383 + 8.25251198725966 NA promoter-TSS (NM_134150) promoter-TSS (NM_134150) -529 NM_134150 107260 Mm.203921 NM_134150 ENSMUSG00000024767 Otub1 AI850305 OTU domain, ubiquitin aldehyde binding 1 protein-coding common_peak2_232_1726_0.282059193344924_10.8950819642014_8.25247953294234 chr5 108130912 108133425 + 8.25247953294234 NA promoter-TSS (NM_028481) promoter-TSS (NM_028481) 423 NM_028876 73130 Mm.363960 NM_028876 ENSMUSG00000063406 Tmed5 3110020O18Rik|4432412D15Rik transmembrane p24 trafficking protein 5 protein-coding common_peak1_171_1791_-0.308403129430941_10.6531533573421_8.25189251710157 chr4 140699133 140701449 + 8.25189251710157 NA Intergenic Intergenic -1182 NM_173867 108911 Mm.253 NM_173867 ENSMUSG00000040945 Rcc2 2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470 regulator of chromosome condensation 2 protein-coding common_peak2_108_599_0.462923545033755_9.46028046301276_8.25108343805655 chr1 88007755 88009030 + 8.25108343805655 NA intron (NM_001033291, intron 1 of 27) CpG 159 NM_001198573 227334 Mm.80484 NM_001033291 ENSMUSG00000005501 Usp40 B230215L03Rik|C730029K03 ubiquitin specific peptidase 40 protein-coding common_peak1_58_239_0.698635809433306_8.25620850032517_8.2499363501736 chr4 151995479 151996246 + 8.2499363501736 NA exon (NM_172705, exon 1 of 4) exon (NM_172705, exon 1 of 4) 317 NM_172705 230936 Mm.25582 NM_172705 ENSMUSG00000047777 Phf13 BC029632|Phf5|SPOC1 PHD finger protein 13 protein-coding common_peak2_331_2773_0.224978419217459_11.5502412819323_8.2498978051106 chr15 93271746 93276353 + 8.2498978051106 NA intron (NM_001033275, intron 1 of 7) intron (NM_001033275, intron 1 of 7) 1035 NM_001033275 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak1_134_1374_-0.354902749581468_10.2477645285087_8.24782443895702 chr4 150908980 150910593 + 8.24782443895702 NA 5' UTR (NM_020569, exon 1 of 7) 5' UTR (NM_020569, exon 1 of 7) 135 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak1_46_166_0.819426794951966_7.79341768995003_8.24516872033889 chr12 102643367 102644349 + 8.24516872033889 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 41162 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_28_291_-0.841161244367449_7.76924393669629_8.24473014273041 chr16 5029159 5029854 + 8.24473014273041 NA exon (NM_028720, exon 8 of 16) exon (NM_028720, exon 8 of 16) -15953 NM_133185 66049 Mm.27792 NM_133185 ENSMUSG00000022540 Rogdi 0610011C19Rik|AU020118|C76152|Lzf rogdi homolog protein-coding common_peak1_97_975_-0.427248789465846_9.71711294282996_8.24450209945757 chr7 127276880 127278878 + 8.24450209945757 NA Intergenic RSINE1|SINE|B4 -3820 NM_009266 20768 Mm.20294 NM_009266 ENSMUSG00000049091 Sephs2 Sps2|Ysg3 selenophosphate synthetase 2 protein-coding common_peak2_353_4033_-0.201722136231499_11.8771343004972_8.24422727707197 chr8 13596948 13603447 + 8.24422727707197 NA intron (NM_009025, intron 4 of 23) intron (NM_009025, intron 4 of 23) -37736 NM_001080781 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak1_24_54_1.30465547861172_6.43368745283052_8.24409955957278 chr4 8394852 8395404 + 8.24409955957278 NA Intergenic MMVL30-int|LTR|ERV1 -140516 NM_021518 59021 Mm.397471 NM_021518 ENSMUSG00000047187 Rab2a 9330148M11Rik|C80220|Rab2 RAB2A, member RAS oncogene family protein-coding common_peak1_23_245_-0.928739037247145_7.47814498671567_8.24403244892684 chr1 171222803 171223291 + 8.24403244892684 NA promoter-TSS (NM_001037170) promoter-TSS (NM_001037170) -533 NM_001037170 641376 Mm.288374 NM_001037170 ENSMUSG00000005674 Tomm40l - translocase of outer mitochondrial membrane 40 homolog-like (yeast) protein-coding common_peak1_23_245_-0.928739037247145_7.47814498671567_8.24403244892684-3 chr4 48076278 48076886 + 8.24403244892684 NA intron (NM_015743, intron 7 of 7) intron (NM_015743, intron 7 of 7) 25336 NM_001307989 18124 Mm.247261 NM_015743 ENSMUSG00000028341 Nr4a3 AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC nuclear receptor subfamily 4, group A, member 3 protein-coding common_peak1_23_245_-0.928739037247145_7.47814498671567_8.24403244892684-2 chr17 57060341 57060715 + 8.24403244892684 NA promoter-TSS (NM_025877) promoter-TSS (NM_025877) -665 NM_025877 66972 Mm.23720 NM_025877 ENSMUSG00000046329 Slc25a23 2310067G05Rik|SCaMC-3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 protein-coding common_peak1_21_227_-0.97309227147079_7.34634387842935_8.24343166690073 chr13 113096564 113097064 + 8.24343166690073 NA intron (NM_010370, intron 2 of 4) intron (NM_010370, intron 2 of 4) 4167 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding unique_peak1_20_38_1.49207242493625_6.03143843133037_8.23970751432308 chr8 25578478 25578893 + 8.23970751432308 NA 3' UTR (NM_173012, exon 11 of 11) 3' UTR (NM_173012, exon 11 of 11) 18802 NM_173012 270035 Mm.268349 NM_173012 ENSMUSG00000037363 Letm2 6030453H13|D030041N04Rik leucine zipper-EF-hand containing transmembrane protein 2 protein-coding common_peak2_114_647_0.446716388087205_9.56320819692823_8.23740506227116 chr9 31210700 31212520 + 8.23740506227116 NA intron (NM_009691, intron 1 of 15) CpG 205 NM_001102455 11804 Mm.19133 NM_009691 ENSMUSG00000031996 Aplp2 AI790698|APLP-2 amyloid beta (A4) precursor-like protein 2 protein-coding common_peak2_304_2478_0.237082481838568_11.394083797006_8.23730828253074 chr17 51811015 51815666 + 8.23730828253074 NA intron (NM_001163632, intron 1 of 10) CpG -1286 NM_001163630 20230 Mm.311655 NM_009122 ENSMUSG00000023927 Satb1 2610306G12Rik|AW413156 special AT-rich sequence binding protein 1 protein-coding common_peak2_95_954_-0.432356832458304_9.68317850669396_8.23682437853478 chr9 110304363 110305965 + 8.23682437853478 NA promoter-TSS (NM_001081381) promoter-TSS (NM_001081381) -28 NM_001081381 72341 Mm.374250 NM_001081381 ENSMUSG00000054836 Elp6 2610001P13Rik|2610002I17Rik|AV159994|Tmem103 elongator acetyltransferase complex subunit 6 protein-coding common_peak1_80_388_0.562715738006686_8.88498421398954_8.23652154624092 chr7 31085247 31086504 + 8.23652154624092 NA Intergenic Intergenic -9178 NM_008557 17178 Mm.263847 NM_008557 ENSMUSG00000057092 Fxyd3 Mat8 FXYD domain-containing ion transport regulator 3 protein-coding common_peak2_107_1081_-0.404052594614509_9.87745848651956_8.23586129263843 chr11 3330449 3333445 + 8.23586129263843 NA exon (NM_178149, exon 2 of 6) exon (NM_178149, exon 2 of 6) 1216 NM_178149 216505 Mm.390323 NM_178149 ENSMUSG00000034614 Pik3ip1 1500004A08Rik|5830455E04Rik|Crkd|Hgfl phosphoinositide-3-kinase interacting protein 1 protein-coding common_peak1_33_337_-0.770730864121656_8.01551400422136_8.23378855996099 chr10 77607520 77608301 + 8.23378855996099 NA intron (NM_001301671, intron 1 of 3) intron (NM_001301671, intron 1 of 3) 1312 NM_001301671 20610 Mm.24433 NM_019929 ENSMUSG00000020265 Sumo3 2810014B19Rik|D10Ertd345e|SMT3A|SUMO-3|Smt3h1 small ubiquitin-like modifier 3 protein-coding common_peak2_33_337_-0.770730864121656_8.01551400422136_8.23378855996099 chr2 165541235 165542405 + 8.23378855996099 NA Intergenic (GAAA)n|Simple_repeat|Simple_repeat 37923 NM_130451 170441 Mm.34147 NM_130451 ENSMUSG00000027661 Slc2a10 AA450473|Glut10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding common_peak1_33_337_-0.770730864121656_8.01551400422136_8.23378855996099-2 chr7 114562714 114563250 + 8.23378855996099 NA promoter-TSS (NR_110408) promoter-TSS (NR_110408) -10 NM_177382 244209 Mm.108037 NM_177382 ENSMUSG00000030670 Cyp2r1 - cytochrome P450, family 2, subfamily r, polypeptide 1 protein-coding common_peak1_143_1474_-0.341976943704831_10.3555107672842_8.22981914264694 chr11 49846709 49847797 + 8.22981914264694 NA intron (NM_001163671, intron 1 of 11) CpG 502 NM_016961 26420 Mm.68933 NM_016961 ENSMUSG00000020366 Mapk9 AI851083|JNK2|Prkm9|p54aSAPK mitogen-activated protein kinase 9 protein-coding common_peak2_83_829_-0.466268260063076_9.46383339620275_8.22865371994186 chr2 157278926 157280004 + 8.22865371994186 NA promoter-TSS (NM_001039557) promoter-TSS (NM_001039557) 84 NM_001039557 629499 Mm.384235 NM_001039557 ENSMUSG00000074627 Mroh8 4922505G16Rik maestro heat-like repeat family member 8 protein-coding common_peak1_105_1059_-0.407494472821094_9.84610131304002_8.227531821184-2 chrX 35888477 35889968 + 8.227531821184 NA intron (NM_001009947, intron 1 of 52) CpG 390 NM_001009947 75974 Mm.32873 NM_177745 ENSMUSG00000031093 Dock11 5033414A21Rik|8030476J24|Zizimin2|sph238 dedicator of cytokinesis 11 protein-coding common_peak1_105_1059_-0.407494472821094_9.84610131304002_8.227531821184 chr6 122268149 122269945 + 8.227531821184 NA Intergenic Intergenic 13786 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak1_268_2951_-0.237117884491388_11.4089180638147_8.22667057811084 chr4 150236467 150238806 + 8.22667057811084 NA intron (NM_001025388, intron 1 of 11) intron (NM_001025388, intron 1 of 11) 312 NM_001025388 433182 Mm.70666 NM_001025388 ENSMUSG00000059040 Eno1b EG433182|Eno1|Gm5506 enolase 1B, retrotransposed protein-coding common_peak1_48_479_-0.630014358697833_8.5918834162596_8.22277705651291 chr10 5194166 5195026 + 8.22277705651291 NA exon (NM_001079686, exon 1 of 55) exon (NM_001079686, exon 1 of 55) 111 NM_001079686 64009 Mm.331626 NM_022027 ENSMUSG00000096054 Syne1 8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756|myne-1 spectrin repeat containing, nuclear envelope 1 protein-coding common_peak2_76_757_-0.489332497398026_9.32138778947208_8.22199647675384 chr7 41632603 41634471 + 8.22199647675384 NA promoter-TSS (NM_023363) promoter-TSS (NM_023363) 6 NM_023363 67607 Mm.384626 NM_023363 ENSMUSG00000074165 Zfp788 2810426N06Rik|AI256342|AI605193 zinc finger protein 788 protein-coding common_peak2_279_2211_0.250146977847896_11.2362091591587_8.22192067381658 chr10 91122676 91124773 + 8.22192067381658 NA intron (NM_133668, intron 1 of 7) CpG-1454 239 NM_133668 18674 Mm.298 NM_133668 ENSMUSG00000061904 Slc25a3 5730556H19Rik|PTP|Phc solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 protein-coding common_peak1_196_1374_0.313890713325916_10.5821612599623_8.22108584776415 chr4 32362901 32365891 + 8.22108584776415 NA Intergenic Intergenic -53039 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_26_272_-0.870549574080258_7.65748235387972_8.21939171411465 chr8 121570558 121571033 + 8.21939171411465 NA intron (NM_133765, intron 1 of 8) intron (NM_133765, intron 1 of 8) 8011 NM_133765 76454 Mm.24829 NM_133765 ENSMUSG00000052934 Fbxo31 1110003O08Rik|2310046N15Rik|Fbx14|Fbxo14 F-box protein 31 protein-coding common_peak1_112_631_0.451738749995299_9.52965012317475_8.21868967075795 chr13 52928938 52930298 + 8.21868967075795 NA promoter-TSS (NM_016709) promoter-TSS (NM_016709) 59 NM_016709 11992 Mm.252034 NM_016709 ENSMUSG00000021460 Auh C77140|W91705 AU RNA binding protein/enoyl-coenzyme A hydratase protein-coding common_peak1_47_469_-0.636129167286548_8.55845236292173_8.21839118173907 chr16 10774467 10775309 + 8.21839118173907 NA Intergenic Intergenic 10648 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding common_peak1_35_355_-0.744435757907375_8.10351555201271_8.21771099631707 chr11 20107953 20108624 + 8.21771099631707 NA intron (NM_146243, intron 1 of 8) Lx8b|LINE|L1 4663 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding common_peak2_78_777_-0.481527253872876_9.36286271804975_8.21564287106488 chr17 33939699 33941350 + 8.21564287106488 NA promoter-TSS (NM_010385) promoter-TSS (NM_010385) -181 NM_010385 14976 Mm.2948 NM_010385 ENSMUSG00000024309 Pfdn6 H-2Ke2|H2-Ke2|Ke-2 prefoldin subunit 6 protein-coding common_peak1_78_777_-0.481527253872876_9.36286271804975_8.21564287106488 chr10 79996440 79997677 + 8.21564287106488 NA promoter-TSS (NM_013850) promoter-TSS (NM_013850) -557 NM_013850 27403 Mm.103351 NM_013850 ENSMUSG00000035722 Abca7 ABCX|Abc51 ATP-binding cassette, sub-family A (ABC1), member 7 protein-coding common_peak1_56_226_0.717950232259258_8.18552360342054_8.21523229914447 chr10 82991074 82992180 + 8.21523229914447 NA intron (NM_021439, intron 1 of 2) AT_rich|Low_complexity|Low_complexity 6130 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak2_68_676_-0.520416703328202_9.1428036719109_8.21476733462561 chr17 83645336 83647700 + 8.21476733462561 NA Intergenic Intergenic -14623 NM_153512 225030 Mm.223506 NM_153512 ENSMUSG00000045053 Kcng3 KV6.3|Kv10.1a|Kv10.1b potassium voltage-gated channel, subfamily G, member 3 protein-coding common_peak2_39_127_0.917746538817132_7.45887326940857_8.21476041165073 chr2 30628578 30629773 + 8.21476041165073 NA Intergenic B4A|SINE|B4 34131 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding common_peak2_209_1500_0.300484280242486_10.7019504017419_8.21289368015594 chr16 64769133 64771819 + 8.21289368015594 NA intron (NM_026273, intron 1 of 2) intron (NM_026273, intron 1 of 2) 463 NM_026273 67609 Mm.212157 NM_026273 ENSMUSG00000059920 4930453N24Rik AI649104|din RIKEN cDNA 4930453N24 gene protein-coding common_peak2_229_1697_0.283557958605146_10.8713997228556_8.21163533794352 chr14 52018921 52020919 + 8.21163533794352 NA promoter-TSS (NM_001253694) promoter-TSS (NM_001253694) -207 NM_001253694 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik zinc finger protein 219 protein-coding common_peak1_53_527_-0.595574241332503_8.7466069986922_8.20997741983847 chr15 76701313 76702252 + 8.20997741983847 NA exon (NM_027122, exon 1 of 5) exon (NM_027122, exon 1 of 5) 240 NM_027122 69572 Mm.34920 NM_027122 ENSMUSG00000019080 Mfsd3 2310010G13Rik major facilitator superfamily domain containing 3 protein-coding common_peak1_53_527_-0.595574241332503_8.7466069986922_8.20997741983847-2 chr9 121277251 121278206 + 8.20997741983847 NA promoter-TSS (NM_177589) promoter-TSS (NM_177589) -556 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding unique_peak1_22_46_1.38387195241587_6.24652482788557_8.20743514756431 chr14 121357961 121358550 + 8.20743514756431 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 20975 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_22_46_1.38387195241587_6.24652482788557_8.20743514756431 chr1 36568520 36569162 + 8.20743514756431 NA intron (NM_027957, intron 3 of 5) intron (NM_027957, intron 3 of 5) -10460 NM_001126047 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding common_peak2_77_367_0.575993804737205_8.81155885842561_8.20591482773736 chr9 14092844 14094296 + 8.20591482773736 NA Intergenic Intergenic -182731 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak1_120_1220_-0.377280640351955_10.0652071648114_8.20489395076289 chr17 24469684 24471458 + 8.20489395076289 NA promoter-TSS (NM_025954) promoter-TSS (NM_025954) 98 NM_025954 67078 Mm.28541 NM_025954 ENSMUSG00000043445 Pgp 1700012G19Rik|AI481330|AUM|G3PP phosphoglycolate phosphatase protein-coding unique_peak2_7_103_-1.63079876620228_5.88504033503995_8.20393902527111-2 chrX 77798971 77799740 + 8.20393902527111 NA Intergenic MTB_Mm|LTR|ERVL-MaLR -3395 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding unique_peak2_7_103_-1.63079876620228_5.88504033503995_8.20393902527111 chr4 125172090 125172994 + 8.20393902527111 NA Intergenic RMER30|DNA|hAT-Charlie -44661 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding unique_peak1_19_34_1.56185121068581_5.91020862228787_8.20393902527109 chr3 65955995 65956426 + 8.20393902527109 NA intron (NM_019937, intron 3 of 10) intron (NM_019937, intron 3 of 10) 2015 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_19_34_1.56185121068581_5.91020862228787_8.20393902527109 chr18 10724867 10725266 + 8.20393902527109 NA promoter-TSS (NM_144860) promoter-TSS (NM_144860) -559 NM_144860 225164 Mm.21500 NM_144860 ENSMUSG00000024294 Mib1 DIP-1|E430019M12Rik|Mib|mKIAA1323 mindbomb E3 ubiquitin protein ligase 1 protein-coding unique_peak1_19_34_1.56185121068581_5.91020862228787_8.20393902527109-2 chr6 47830212 47830614 + 8.20393902527109 NA promoter-TSS (NM_177882) promoter-TSS (NM_177882) 92 NM_177882 330301 Mm.128149 NM_177882 ENSMUSG00000051499 Zfp786 A730012O14Rik|Znf786 zinc finger protein 786 protein-coding unique_peak1_19_34_1.56185121068581_5.91020862228787_8.20393902527109-3 chr7 113242381 113242744 + 8.20393902527109 NA intron (NM_001243048, intron 2 of 16) intron (NM_001243048, intron 2 of 16) 35097 NM_007489 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak2_69_311_0.622655806847641_8.59673012228607_8.20243304683904 chr11 106678058 106680398 + 8.20243304683904 NA intron (NM_001305158, intron 12 of 14) intron (NM_001305158, intron 12 of 14) 36053 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak1_80_798_-0.475709609935098_9.40419688796043_8.20088441066535 chr15 78406071 78407160 + 8.20088441066535 NA promoter-TSS (NM_001162492) promoter-TSS (NM_001162492) -97 NM_001162493 246221 Mm.294215 NM_138670 ENSMUSG00000071711 Mpst Mst mercaptopyruvate sulfurtransferase protein-coding common_peak2_63_271_0.662015044247541_8.41847036337411_8.20084008767301 chr6 39780805 39782528 + 8.20084008767301 NA Intergenic T-rich|Low_complexity|Low_complexity 29270 NM_010270 14548 Mm.377071 NM_010270 ENSMUSG00000029918 Mrps33 AI841153|CGI-139|Gdap3|MRP-S33|PTD003 mitochondrial ribosomal protein S33 protein-coding common_peak2_117_1188_-0.383394283517475_10.0238358579869_8.20072599077614 chr16 56074670 56076486 + 8.20072599077614 NA promoter-TSS (NM_001304503) promoter-TSS (NM_001304503) 98 NM_001304503 66315 Mm.255784 NM_025483 ENSMUSG00000052917 Senp7 2410152H17Rik|2810413I22Rik|2900036C23Rik|6030449K19Rik|AI790676 SUMO1/sentrin specific peptidase 7 protein-coding common_peak2_179_1882_-0.299414024676885_10.7291102722758_8.20060272720762 chr13 21808835 21812708 + 8.20060272720762 NA promoter-TSS (NM_001313878) promoter-TSS (NM_001313878) 304 NM_178185 319171 Mm.250564 NM_178185 ENSMUSG00000094777 Hist1h2ap ENSMUSG00000060262|Gm11276|OTTMUSG00000000448 histone cluster 1, H2ap protein-coding common_peak2_57_566_-0.571929299243303_8.86124027532058_8.199521558327 chr6 87887188 87888676 + 8.199521558327 NA promoter-TSS (NM_201244) promoter-TSS (NM_201244) -8 NM_017477 54161 Mm.258785 NM_017477 ENSMUSG00000030058 Copg1 AU019265|BC056168|Copg|D6Ertd71e|D6Wsu16e coatomer protein complex, subunit gamma 1 protein-coding common_peak2_109_1101_-0.398005178998886_9.90690591907171_8.19834239079417 chr7 31001710 31003854 + 8.19834239079417 NA Intergenic Intergenic 20861 NM_001242647 76415 Mm.259739 NM_175240 ENSMUSG00000046826 Fam187b 1700020B09Rik|Tmem162 family with sequence similarity 187, member B protein-coding common_peak1_134_1373_-0.353853135100184_10.247239721268_8.19786589446425 chr1 177795536 177796677 + 8.19786589446425 NA intron (NM_007422, intron 1 of 12) CpG 403 NM_007422 11566 Mm.338021 NM_007422 ENSMUSG00000015961 Adss AI314886|AS|Adss2 adenylosuccinate synthetase, non muscle protein-coding common_peak2_152_970_0.368477807861549_10.10756638935_8.19767616308308 chr7 100844387 100847325 + 8.19767616308308 NA TTS (NM_177073) TTS (NM_177073) 17557 NM_177073 320100 Mm.40336 NM_177073 ENSMUSG00000008318 Relt E430021K24Rik|Tnfrsf19l RELT tumor necrosis factor receptor protein-coding common_peak1_353_3021_0.214985287216635_11.6687805887731_8.19633652439998 chr5 114772488 114775671 + 8.19633652439998 NA promoter-TSS (NM_001077360) promoter-TSS (NM_001077360) -587 NM_001077359 26431 Mm.195632 NM_019834 ENSMUSG00000041890 Git2 1500036H07Rik|5830420E16Rik|6430510B20Rik|9630056M03Rik|B230104M05Rik|CAT2|mKIAA0148 G protein-coupled receptor kinase-interactor 2 protein-coding common_peak1_46_460_-0.645491853003321_8.52587701392768_8.19482552901486 chrX 168673487 168674034 + 8.19482552901486 NA 5' UTR (NM_010832, exon 1 of 12) 5' UTR (NM_010832, exon 1 of 12) 142 NM_010832 17692 Mm.24248 NM_010832 ENSMUSG00000031358 Msl3 AU018931|Msl31|Msl3l1 male-specific lethal 3 homolog (Drosophila) protein-coding common_peak2_46_460_-0.645491853003321_8.52587701392768_8.19482552901486 chr6 106768513 106770021 + 8.19482552901486 NA intron (NM_001242358, intron 1 of 8) CpG 129 NM_001242358 70047 Mm.196332 NM_027296 ENSMUSG00000013736 Trnt1 2410043H24Rik|2610044E04Rik|9830143O18Rik|AA408384|C76540|CGI-47|mt-Trat tRNA nucleotidyl transferase, CCA-adding, 1 protein-coding common_peak2_51_196_0.759981736370912_8.00204268764183_8.1942267100877 chr4 123016142 123017300 + 8.1942267100877 NA exon (NM_025873, exon 1 of 11) exon (NM_025873, exon 1 of 11) 124 NM_025873 66966 Mm.235030 NM_025873 ENSMUSG00000028653 Trit1 2310075G14Rik|AI314189|AI314635|AV099619|IPT|MOD5 tRNA isopentenyltransferase 1 protein-coding common_peak2_211_2257_-0.271863382957177_11.0048980792944_8.19290210557977 chr17 27824793 27827913 + 8.19290210557977 NA Intergenic Intergenic -5811 NM_001271511 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak1_84_839_-0.462603669813632_9.48294368275931_8.19288765688813 chr6 136808285 136809386 + 8.19288765688813 NA 3' UTR (NM_177688, exon 1 of 1) 3' UTR (NM_177688, exon 1 of 1) 587 NM_177688 232440 Mm.154564 NM_177688 ENSMUSG00000060032 H2afj E130307C13 H2A histone family, member J protein-coding common_peak1_38_383_-0.712019051113296_8.22895297516451_8.19223217578617 chr2 144166954 144167620 + 8.19223217578617 NA Intergenic tRNA-Ala-GCY_|tRNA|tRNA 22003 NM_001033778 common_peak1_125_738_0.418790916991988_9.73882601264214_8.19185286919367 chr17 57291086 57292591 + 8.19185286919367 NA intron (NM_001163815, intron 2 of 27) Lx8|LINE|L1 12738 NM_001163815 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding common_peak2_176_1187_0.335341800394342_10.3819900209979_8.1885110061657 chr19 46862170 46865495 + 8.1885110061657 NA intron (NM_001102471, intron 4 of 6) intron (NM_001102471, intron 4 of 6) 98519 NM_029810 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak2_312_2566_0.232575615418796_11.4421553882848_8.1871048363438 chr11 49049676 49053601 + 8.1871048363438 NA promoter-TSS (NM_173434).2 promoter-TSS (NM_173434).2 -396 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5|OTTMUSG00000005540 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak1_565_5583_0.159671174419467_12.5269188134194_8.18609262170988 chr19 53459225 53463978 + 8.18609262170988 NA intron (NR_028427, intron 2 of 9) intron (NR_028427, intron 2 of 9) 3195 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_64_636_-0.538235041923404_9.0460320412946_8.18482620263058 chr18 37923994 37925187 + 8.18482620263058 NA intron (NM_001305981, intron 1 of 28) intron (NM_001305981, intron 1 of 28) 10833 NM_001305980 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding common_peak1_30_309_-0.809442200539932_7.87140330500427_8.18481931519798 chr12 79647330 79647967 + 8.18481931519798 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 277085 NR_131075 77290 Mm.395042 NR_131073 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak1_115_1166_-0.386700908822068_9.99523839129631_8.18423596195849 chr3 123508526 123509362 + 8.18423596195849 NA promoter-TSS (NR_028573) promoter-TSS (NR_028573) -608 NR_028574 69895 Mm.260791 NR_028574 ENSMUSG00000104960 Snhg8 1110065M07Rik|2010109N14Rik small nucleolar RNA host gene 8 ncRNA common_peak1_83_410_0.547704682489528_8.95684692492645_8.18387623818493 chr6 13607348 13608248 + 8.18387623818493 NA intron (NM_028990, intron 1 of 4) CpG 265 NM_028990 101118 Mm.254845 NM_028990 ENSMUSG00000029569 Tmem168 5730526F17Rik|8430437G11Rik|AI462344|AI504145 transmembrane protein 168 protein-coding common_peak2_83_410_0.547704682489528_8.95684692492645_8.18387623818493 chr1 138250635 138252612 + 8.18387623818493 NA Intergenic MTA_Mm|LTR|ERVL-MaLR -22115 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_204_1452_0.304729864310906_10.6571839197883_8.18365468985825 chr15 59759196 59763638 + 8.18365468985825 NA Intergenic Lx7|LINE|L1 33542 NR_045076 100503021 Mm.402924 NR_045076 Gm19510 - predicted gene, 19510 ncRNA common_peak1_50_190_0.770241949091708_7.9625498025816_8.1773835218228 chr15 73644774 73645746 + 8.1773835218228 NA Intergenic Intergenic -20516 NM_001033219 106068 Mm.212813 NM_001033219 ENSMUSG00000079020 Slc45a4 9330175B01Rik|AW552276 solute carrier family 45, member 4 protein-coding common_peak1_95_953_-0.430845365540703_9.68242277323516_8.17697404445195 chr14 55094456 55095351 + 8.17697404445195 NA 5' UTR (NM_153083, exon 1 of 2) 5' UTR (NM_153083, exon 1 of 2) 119 NM_153083 105663 Mm.319204 NM_153083 ENSMUSG00000045691 Thtpa AW122966 thiamine triphosphatase protein-coding common_peak2_24_254_-0.908338244722474_7.54018431449762_8.17658712409576 chr6 67399753 67400559 + 8.17658712409576 NA Intergenic Intergenic -24019 NM_008354 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding unique_peak2_24_254_-0.908338244722474_7.54018431449762_8.17658712409576 chr7 75834511 75835829 + 8.17658712409576 NA Intergenic MTE2a|LTR|ERVL-MaLR -13168 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_24_254_-0.908338244722474_7.54018431449762_8.17658712409576 chr14 45329837 45330312 + 8.17658712409576 NA intron (NM_025959, intron 1 of 13) CpG 250 NM_025959 67089 Mm.18472 NM_025959 ENSMUSG00000021832 Psmc6 2300001E01Rik|AI451058 proteasome (prosome, macropain) 26S subunit, ATPase, 6 protein-coding common_peak1_63_625_-0.540540961434738_9.01974836621525_8.17277724686718 chr7 80535261 80535920 + 8.17277724686718 NA promoter-TSS (NM_001042527) promoter-TSS (NM_001042527) -471 NM_001042527 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding common_peak1_32_91_1.05375799160387_7.05044095185895_8.17138007238233 chr8 35666217 35666876 + 8.17138007238233 NA intron (NM_001081279, intron 2 of 2) intron (NM_001081279, intron 2 of 2) -77526 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_17_191_-1.08027713884849_7.04482393129691_8.17138007238228 chr2 24949941 24950498 + 8.17138007238228 NA promoter-TSS (NM_147179) promoter-TSS (NM_147179) 61 NM_147179 67187 Mm.296106 NM_026021 ENSMUSG00000026974 Zmynd19 2700064H14Rik|AA536891|AU014915|mizip zinc finger, MYND domain containing 19 protein-coding unique_peak2_17_191_-1.08027713884849_7.04482393129691_8.17138007238228 chr8 116640031 116641343 + 8.17138007238228 NA intron (NM_029441, intron 1 of 6) intron (NM_029441, intron 1 of 6) 92304 NM_029441 75796 Mm.159575 NM_029441 ENSMUSG00000031758 Cdyl2 1700029M19Rik|4930453I21Rik|Gm20194 chromodomain protein, Y chromosome-like 2 protein-coding common_peak1_140_1439_-0.344587492750371_10.3195593499545_8.17032526215045 chr12 55302033 55303554 + 8.17032526215045 NA 5' UTR (NM_025373, exon 1 of 7) 5' UTR (NM_025373, exon 1 of 7) 156 NM_025373 66132 Mm.383213 NM_025373 ENSMUSG00000021023 1110008L16Rik Kiaa0391|Mrpp3|mKIAA0391 RIKEN cDNA 1110008L16 gene protein-coding common_peak1_116_1176_-0.3838206392773_10.0089882853998_8.16922940106139 chr17 74293903 74295833 + 8.16922940106139 NA promoter-TSS (NM_133771) promoter-TSS (NM_133771) -5 NM_133771 76890 Mm.311874 NM_133771 ENSMUSG00000058704 Memo1 0610016J10Rik|D930048L02Rik mediator of cell motility 1 protein-coding common_peak1_473_4433_0.178452863585649_12.2036194866601_8.16905890379077 chr4 33246762 33249335 + 8.16905890379077 NA exon (NM_001033225, exon 1 of 2) exon (NM_001033225, exon 1 of 2) 739 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding unique_peak2_20_218_-0.997312415802676_7.27613085169984_8.16895880922765 chr8 128607880 128609416 + 8.16895880922765 NA Intergenic MLT1A|LTR|ERVL-MaLR -77006 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_20_218_-0.997312415802676_7.27613085169984_8.16895880922765 chr17 78995541 78996043 + 8.16895880922765 NA intron (NM_029239, intron 2 of 18) T-rich|Low_complexity|Low_complexity 12713 NM_001171005 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding common_peak2_136_1395_-0.350745669674794_10.2717103913723_8.16882504387872 chr7 110061622 110062704 + 8.16882504387872 NA intron (NM_009281, intron 1 of 15) CpG 461 NM_009281 20841 Mm.10815 NM_009281 ENSMUSG00000061079 Zfp143 AA959806|AU015869|D7Ertd805e|KRAB14|SBF|Staf|Zfp79|Zfp80-rs1|Znf143|pHZ-1 zinc finger protein 143 protein-coding common_peak2_206_2197_-0.275245834549153_10.9643527536747_8.16767267776767 chr11 119083593 119086983 + 8.16767267776767 NA intron (NM_007625, intron 2 of 4) intron (NM_007625, intron 2 of 4) 949 NM_007625 12418 Mm.268070 NM_007625 ENSMUSG00000039989 Cbx4 MPc2|PC2 chromobox 4 protein-coding common_peak2_291_2340_0.242634429646328_11.3142264339352_8.16757479848572 chr15 78563331 78568699 + 8.16757479848572 NA exon (NM_009008, exon 3 of 7) exon (NM_009008, exon 3 of 7) 6768 NM_009008 19354 Mm.1972 NM_009008 ENSMUSG00000033220 Rac2 AI323801|AI452260 RAS-related C3 botulinum substrate 2 protein-coding common_peak1_51_508_-0.609488290248407_8.68677770095149_8.16559105732478-2 chr18 80709153 80710288 + 8.16559105732478 NA intron (NM_198429, intron 1 of 9) intron (NM_198429, intron 1 of 9) -1547 NM_001164112 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_51_508_-0.609488290248407_8.68677770095149_8.16559105732478 chr1 191575624 191576275 + 8.16559105732478 NA promoter-TSS (NM_029766) promoter-TSS (NM_029766) 313 NM_001306204 77065 Mm.338175 NM_178632 ENSMUSG00000037461 Ints7 5930412E23Rik|int7 integrator complex subunit 7 protein-coding common_peak1_59_246_0.686901512199382_8.29181798768437_8.16534765630777 chr3 130736600 130737617 + 8.16534765630777 NA Intergenic Intergenic -6710 NM_001005859 68436 Mm.140568 NM_026724 ENSMUSG00000062006 Rpl34 1100001I22Rik ribosomal protein L34 protein-coding common_peak1_78_374_0.571352305730073_8.83642293824828_8.1631258999471 chr4 155217477 155218409 + 8.1631258999471 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 4592 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_120_697_0.429483618425795_9.66182503542255_8.16287341828238 chr5 32853324 32854923 + 8.16287341828238 NA 5' UTR (NM_194340, exon 1 of 11) 5' UTR (NM_194340, exon 1 of 11) 107 NM_194340 215476 Mm.248721 NM_194340 ENSMUSG00000054280 Prr14l 6030436E02Rik|C330019G07Rik|Prl14l proline rich 14-like protein-coding common_peak1_55_546_-0.582219961588276_8.80428704199842_8.16219306654925 chr9 44134100 44135301 + 8.16219306654925 NA promoter-TSS (NM_023061) promoter-TSS (NM_023061) 42 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding common_peak1_54_214_0.733098168796455_8.11474193398769_8.16104036019772 chr4 142077611 142078283 + 8.16104036019772 NA intron (NM_145402, intron 1 of 2) intron (NM_145402, intron 1 of 2) -6351 NR_027137 100038693 Mm.402714 NR_027137 ENSMUSG00000073728 Tmem51os1 ENSMUSG00000073728|Gm10565|Tmem51as1 Tmem51 opposite strand 1 ncRNA common_peak2_54_214_0.733098168796455_8.11474193398769_8.16104036019772 chr11 94601173 94602463 + 8.16104036019772 NA promoter-TSS (NM_153807) promoter-TSS (NM_153807) -32 NM_153807 264895 Mm.386885 NM_153807 ENSMUSG00000076435 Acsf2 - acyl-CoA synthetase family member 2 protein-coding unique_peak2_5_85_-1.86571390898271_5.49340780021074_8.15948973430341-2 chr9 20651149 20651871 + 8.15948973430341 NA promoter-TSS (NM_023371) promoter-TSS (NM_023371) -620 NM_023371 23988 Mm.7906 NM_023371 ENSMUSG00000032171 Pin1 0610025L01Rik|D9Bwg1161e protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 protein-coding unique_peak2_5_85_-1.86571390898271_5.49340780021074_8.15948973430341 chr17 86120807 86121673 + 8.15948973430341 NA intron (NM_030133, intron 7 of 20) intron (NM_030133, intron 7 of 20) 23935 NM_030133 78586 Mm.146236 NM_030133 ENSMUSG00000024135 Srbd1 AI461933|C85414|D530025C17Rik S1 RNA binding domain 1 protein-coding unique_peak1_16_24_1.75968007119945_5.52369622537445_8.1594897343034-3 chr17 84847218 84847571 + 8.1594897343034 NA Intergenic Intergenic -56608 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding unique_peak1_16_24_1.75968007119945_5.52369622537445_8.1594897343034-6 chr6 148331958 148332434 + 8.1594897343034 NA intron (NM_198967, intron 7 of 19) ORR1E|LTR|ERVL-MaLR -22460 NR_003634 66184 Mm.391542 NM_025405 ENSMUSG00000063171 Rps4l 1110033J19Rik|AA407494|Rps4y2 ribosomal protein S4-like pseudo unique_peak1_16_24_1.75968007119945_5.52369622537445_8.1594897343034-4 chr2 165558249 165558687 + 8.1594897343034 NA Intergenic Intergenic -36560 NM_001271963 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding unique_peak1_16_24_1.75968007119945_5.52369622537445_8.1594897343034-7 chr7 66191482 66191831 + 8.1594897343034 NA Intergenic Intergenic 82141 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding unique_peak1_16_24_1.75968007119945_5.52369622537445_8.1594897343034 chr1 64508625 64509026 + 8.1594897343034 NA Intergenic Intergenic -23979 NM_133828 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding unique_peak1_16_24_1.75968007119945_5.52369622537445_8.1594897343034-8 chr8 69967376 69967828 + 8.1594897343034 NA intron (NM_001286450, intron 1 of 12) PB1D11|SINE|Alu 6781 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding unique_peak1_16_24_1.75968007119945_5.52369622537445_8.1594897343034-2 chr11 97724102 97724485 + 8.1594897343034 NA intron (NM_054051, intron 5 of 9) intron (NM_054051, intron 5 of 9) 20411 NM_054051 108083 Mm.39700 NM_054051 ENSMUSG00000018547 Pip4k2b AI848124|PI5P4Kbeta|Pip5k2b|c11 phosphatidylinositol-5-phosphate 4-kinase, type II, beta protein-coding unique_peak1_16_24_1.75968007119945_5.52369622537445_8.1594897343034-5 chr6 97293720 97294122 + 8.1594897343034 NA intron (NM_145148, intron 22 of 23) intron (NM_145148, intron 22 of 23) -41141 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_22_236_-0.950282444804749_7.41360202649588_8.15745280740787 chr1 128592348 128592813 + 8.15745280740787 NA promoter-TSS (NM_009911) promoter-TSS (NM_009911) -281 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_28_72_1.15883875563255_6.76924393669629_8.15665060373803-2 chr15 77814024 77814519 + 8.15665060373803 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 27904 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_28_72_1.15883875563255_6.76924393669629_8.15665060373803 chr13 63886416 63887058 + 8.15665060373803 NA intron (NM_001013608, intron 17 of 18) B1F|SINE|Alu 71403 NM_023507 76251 Mm.186610 NM_023507 ENSMUSG00000021470 Ercc6l2 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278 excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 protein-coding common_peak2_126_1285_-0.366464233153902_10.145442810751_8.15631342162063 chr8 60981081 60984188 + 8.15631342162063 NA intron (NM_173873, intron 1 of 12) intron (NM_173873, intron 1 of 12) 677 NM_173873 12725 Mm.25263 NM_007711 ENSMUSG00000004319 Clcn3 Clc3 chloride channel, voltage-sensitive 3 protein-coding common_peak1_11_137_-1.32136129987243_6.44784380684195_8.15561887467803 chr15 93297998 93298346 + 8.15561887467803 NA intron (NM_024189, intron 2 of 3) intron (NM_024189, intron 2 of 3) -23088 NM_001033275 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak1_114_1154_-0.38711074533159_9.98012176363762_8.15320972680201 chr11 84879257 84880513 + 8.15320972680201 NA promoter-TSS (NM_025414) promoter-TSS (NM_025414) 310 NM_027388 70325 Mm.390414 NM_027388 ENSMUSG00000045140 Pigw 2610044A17Rik|Gwt1 phosphatidylinositol glycan anchor biosynthesis, class W protein-coding unique_peak2_6_94_-1.73651548068573_5.70159786798808_8.15295093272915 chr16 8470670 8471347 + 8.15295093272915 NA intron (NM_146247, intron 1 of 10) intron (NM_146247, intron 1 of 10) 195 NM_146247 239706 Mm.214953 NM_146247 ENSMUSG00000039345 Mettl22 - methyltransferase like 22 protein-coding common_peak1_19_208_-1.01622490445011_7.19924667985583_8.15228547670284 chr1 170852940 170853459 + 8.15228547670284 NA intron (NM_001081304, intron 2 of 15) intron (NM_001081304, intron 2 of 15) 14572 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding common_peak2_174_1169_0.337258486931088_10.3609220579363_8.15172298065983 chr8 11462637 11465361 + 8.15172298065983 NA intron (NM_011227, intron 1 of 1) MLT1B|LTR|ERVL-MaLR -13930 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak2_48_178_0.793060459646428_7.88034600708747_8.15168024197157 chr5 113872000 113873254 + 8.15168024197157 NA intron (NM_011779, intron 2 of 10) intron (NM_011779, intron 2 of 10) 36079 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_48_178_0.793060459646428_7.88034600708747_8.15168024197157 chr2 101780919 101782053 + 8.15168024197157 NA intron (NM_001110849, intron 2 of 9) intron (NM_001110849, intron 2 of 9) 16221 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak2_283_2255_0.246832815820934_11.2629677603093_8.15134899070214 chr8 84191212 84194091 + 8.15134899070214 NA Intergenic CpG -13690 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak1_109_608_0.457604911665939_9.4791008737393_8.15114084194572 chr18 66470590 66471774 + 8.15114084194572 NA Intergenic Intergenic 12578 NM_021451 58801 Mm.271878 NM_021451 ENSMUSG00000024521 Pmaip1 Noxa phorbol-12-myristate-13-acetate-induced protein 1 protein-coding common_peak2_65_285_0.644060922068848_8.48190179781281_8.15112342935644 chr3 88447612 88449283 + 8.15112342935644 NA intron (NM_001163489, intron 9 of 14) intron (NM_001163489, intron 9 of 14) 7314 NM_013658 20351 Mm.439752 NM_013658 ENSMUSG00000028064 Sema4a AI132332|SemB|Semab sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A protein-coding common_peak2_106_1068_-0.403075718364716_9.86050827853813_8.15098257803427 chr11 101447774 101449829 + 8.15098257803427 NA intron (NM_027320, intron 1 of 6) intron (NM_027320, intron 1 of 6) 389 NM_027320 70110 Mm.45558 NM_027320 ENSMUSG00000010358 Ifi35 2010008K16Rik|AW986054|IFP35|ifi-35 interferon-induced protein 35 protein-coding common_peak2_199_2114_-0.280589822311859_10.9061470368514_8.15026369535018 chr13 111795445 111798888 + 8.15026369535018 NA intron (NM_011945, intron 1 of 19) intron (NM_011945, intron 1 of 19) 11817 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding common_peak2_62_615_-0.545177380743119_8.99419785032334_8.1466156314847 chr18 35729805 35731349 + 8.1466156314847 NA 3' UTR (NM_001033168, exon 2 of 2) 3' UTR (NM_001033168, exon 2 of 2) 3588 NM_001033168 73449 Mm.379225 NM_001033168 ENSMUSG00000073598 1700066B19Rik - RIKEN cDNA 1700066B19 gene protein-coding common_peak1_181_1904_-0.296617928474282_10.7472663181435_8.14640623307922 chr11 115157190 115159186 + 8.14640623307922 NA intron (NM_001163753, intron 3 of 8) intron (NM_001163753, intron 3 of 8) 4010 NM_021411 58222 Mm.143789 NM_021411 ENSMUSG00000020732 Rab37 B230331O03Rik|B230354I04Rik RAB37, member RAS oncogene family protein-coding common_peak1_32_327_-0.780232056957204_7.96743597613948_8.14624046580508 chr1 184005701 184006270 + 8.14624046580508 NA Intergenic Intergenic 28013 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak2_47_172_0.805759551641727_7.83750800345759_8.1433036280326 chr18 80550013 80551273 + 8.1433036280326 NA Intergenic Intergenic -6097 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_80_389_0.559011769243268_8.88683619837125_8.1430907456509 chr18 24529075 24530583 + 8.1430907456509 NA intron (NM_144861, intron 1 of 6) CpG 375 NM_144861 225283 Mm.28427 NM_144861 ENSMUSG00000040446 Rprd1a C77387|mKIAA4077 regulation of nuclear pre-mRNA domain containing 1A protein-coding common_peak2_131_789_0.404835726969125_9.82812670654903_8.14278373181749 chr5 125051487 125054813 + 8.14278373181749 NA intron (NM_001253904, intron 18 of 47) intron (NM_001253904, intron 18 of 47) 49675 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak2_201_2138_-0.279260262373233_10.9230906359784_8.14095196422156 chr9 21319634 21323730 + 8.14095196422156 NA intron (NM_001199186, intron 1 of 21) intron (NM_001199186, intron 1 of 21) 963 NM_001199186 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding common_peak1_23_50_1.3413501261206_6.34310040503179_8.13927951951981-2 chr13 64274719 64275226 + 8.13927951951981 NA promoter-TSS (NM_172587) promoter-TSS (NM_172587) 16 NM_172587 218294 Mm.25335 NM_172587 ENSMUSG00000033102 Cdc14b 2810432N10Rik|A530086E13Rik|AA472821|CDC14B3|Cdc14B1 CDC14 cell division cycle 14B protein-coding common_peak1_23_50_1.3413501261206_6.34310040503179_8.13927951951981-3 chr9 110662117 110662466 + 8.13927951951981 NA intron (NM_028312, intron 1 of 6) B4A|SINE|B4 5788 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_23_50_1.3413501261206_6.34310040503179_8.13927951951981 chr12 100481888 100482403 + 8.13927951951981 NA intron (NM_001033213, intron 3 of 19) intron (NM_001033213, intron 3 of 19) 38677 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak1_53_208_0.741460745945068_8.07808950505342_8.13664154974268 chr10 20104741 20105533 + 8.13664154974268 NA intron (NM_008580, intron 18 of 29) intron (NM_008580, intron 18 of 29) -43783 NM_008635 17761 Mm.20928 NM_008635 ENSMUSG00000019996 Map7 E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste microtubule-associated protein 7 protein-coding common_peak1_82_817_-0.466451163773401_9.44273145105505_8.1365751620826 chr8 46782536 46784131 + 8.1365751620826 NA intron (NM_008391, intron 1 of 8) intron (NM_008391, intron 1 of 8) 43588 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak2_472_4422_0.178299056483146_12.1999590551402_8.13523785840758 chr12 25333946 25341882 + 8.13523785840758 NA Intergenic Intergenic 208740 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_33_336_-0.766456209021332_8.01337667667119_8.1337213017513 chr14 120911149 120911680 + 8.1337213017513 NA intron (NM_023579, intron 1 of 25) CpG 220 NM_023579 70572 Mm.221452 NM_023579 ENSMUSG00000030662 Ipo5 1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5 importin 5 protein-coding common_peak1_34_101_1.00902037255204_7.17693552824751_8.13145243395533 chr11 49054285 49054883 + 8.13145243395533 NA intron (NM_010999, intron 1 of 5) L1_Mus3|LINE|L1 -3342 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5|OTTMUSG00000005540 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak2_34_101_1.00902037255204_7.17693552824751_8.13145243395533 chr13 81162793 81163682 + 8.13145243395533 NA intron (NM_054053, intron 86 of 89) intron (NM_054053, intron 86 of 89) 199163 NR_015587 319983 Mm.343027 NR_015587 ENSMUSG00000097098 9330111N05Rik - RIKEN cDNA 9330111N05 gene ncRNA unique_peak1_21_42_1.43353298799185_6.14303124869802_8.12954651880862-4 chr4 147942966 147943547 + 8.12954651880862 NA intron (NM_029841, intron 1 of 2) intron (NM_029841, intron 1 of 2) 2361 NM_029841 77034 Mm.183076 NM_029841 ENSMUSG00000044496 2510039O18Rik Kiaa2013 RIKEN cDNA 2510039O18 gene protein-coding unique_peak1_21_42_1.43353298799185_6.14303124869802_8.12954651880862 chr1 7146784 7147250 + 8.12954651880862 NA intron (NM_183028, intron 2 of 5) intron (NM_183028, intron 2 of 5) 58097 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding unique_peak1_21_42_1.43353298799185_6.14303124869802_8.12954651880862-2 chr13 32974727 32975374 + 8.12954651880862 NA intron (NM_011454, intron 5 of 6) intron (NM_011454, intron 5 of 6) 9537 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding unique_peak1_21_42_1.43353298799185_6.14303124869802_8.12954651880862-3 chr14 121881965 121882476 + 8.12954651880862 NA intron (NM_026861, intron 1 of 8) intron (NM_026861, intron 1 of 8) -2812 NR_130999 78312 Mm.188743 NR_130999 ENSMUSG00000102112 1810041H14Rik - RIKEN cDNA 1810041H14 gene ncRNA common_peak1_21_42_1.43353298799185_6.14303124869802_8.12954651880862 chr7 58827588 58828016 + 8.12954651880862 NA exon (NM_009728, exon 20 of 21) exon (NM_009728, exon 20 of 21) 169600 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak1_21_42_1.43353298799185_6.14303124869802_8.12954651880862-5 chr6 50402890 50403414 + 8.12954651880862 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -20315 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_270_2972_-0.234236214560237_11.4205856406275_8.12929667600531 chr8 47712945 47715142 + 8.12929667600531 NA promoter-TSS (NM_172407) promoter-TSS (NM_172407) -112 NM_172407 70925 Mm.393807 NM_172407 ENSMUSG00000038069 Cdkn2aip 4921511I16Rik|AW208986|CARF CDKN2A interacting protein protein-coding common_peak1_23_244_-0.922862470910476_7.47520670354733_8.12701436894157 chr5 64102445 64102957 + 8.12701436894157 NA intron (NM_025700, intron 3 of 13) intron (NM_025700, intron 3 of 13) 9751 NM_025700 66681 Mm.2325 NM_025700 ENSMUSG00000029171 Pgm1 3230402E02Rik|Pgm-1|Pgm2 phosphoglucomutase 1 protein-coding unique_peak2_23_244_-0.922862470910476_7.47520670354733_8.12701436894157 chr1 60745328 60746220 + 8.12701436894157 NA promoter-TSS (NM_007642) promoter-TSS (NM_007642) -614 NM_007642 12487 Mm.255003 NM_007642 ENSMUSG00000026012 Cd28 - CD28 antigen protein-coding common_peak1_58_576_-0.566901103603657_8.88897695684365_8.12664888180806-2 chr9 120582150 120583337 + 8.12664888180806 NA Intergenic Intergenic 5412 NR_073359 76100 Mm.48212 NR_073359 ENSMUSG00000052658 5830454E08Rik - RIKEN cDNA 5830454E08 gene ncRNA common_peak1_58_576_-0.566901103603657_8.88897695684365_8.12664888180806 chr1 172514100 172514984 + 8.12664888180806 NA Intergenic Intergenic -6588 NM_027972 71870 Mm.78373 NM_027972 ENSMUSG00000026546 Cfap45 1700028D05Rik|Ccdc19|Nesg1 cilia and flagella associated protein 45 protein-coding unique_peak2_34_345_-0.753182513113192_8.05803697108013_8.125177705729 chr2 34903996 34905911 + 8.125177705729 NA intron (NM_028716, intron 6 of 14) intron (NM_028716, intron 6 of 14) 9023 NM_028716 74016 Mm.65691 NM_028716 ENSMUSG00000026873 Phf19 3110009G19Rik|3321402G02Rik PHD finger protein 19 protein-coding common_peak1_57_233_0.70491090611552_8.22282017264116_8.12441278414475 chr2 131510078 131510909 + 8.12441278414475 NA intron (NM_145533, intron 1 of 6) L1ME3|LINE|L1 18631 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding unique_peak2_61_259_0.670926702892208_8.35783116447456_8.12285897588329 chr11 119855276 119857246 + 8.12285897588329 NA intron (NM_028898, intron 17 of 33) intron (NM_028898, intron 17 of 33) -21896 NR_045312 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA common_peak1_35_106_0.989830686657877_7.23638232973008_8.12236869672129 chr6 135362813 135363315 + 8.12236869672129 NA 5' UTR (NM_010128, exon 1 of 5) 5' UTR (NM_010128, exon 1 of 5) 133 NM_001288628 13730 Mm.182785 NM_010128 ENSMUSG00000030208 Emp1 I-8-09|TMP epithelial membrane protein 1 protein-coding common_peak1_171_1142_0.340342104412185_10.3287807404206_8.12146538810089-2 chr9 66349802 66351452 + 8.12146538810089 NA intron (NM_145617, intron 1 of 77) CpG 177 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak1_171_1142_0.340342104412185_10.3287807404206_8.12146538810089 chr8 11462814 11465196 + 8.12146538810089 NA intron (NM_011227, intron 1 of 1) MLT1B|LTR|ERVL-MaLR -13924 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA unique_peak1_25_59_1.24853064903241_6.53115592012472_8.12143453596044 chr16 11633477 11634112 + 8.12143453596044 NA intron (NM_001290148, intron 9 of 13) ORR1A4|LTR|ERVL-MaLR -145908 NR_126430 73761 Mm.39183 NR_126430 4833415N18Rik - RIKEN cDNA 4833415N18 gene ncRNA common_peak2_231_2495_-0.256901970790613_11.1569512334669_8.11966591735852 chr14 16242559 16244928 + 8.11966591735852 NA intron (NM_027695, intron 1 of 2) intron (NM_027695, intron 1 of 2) -5571 NM_021504 59007 Mm.258381 NM_021504 ENSMUSG00000021785 Ngly1 1110002C09Rik|PNGase|Png1 N-glycanase 1 protein-coding common_peak2_122_1240_-0.371709618911646_10.0914325906745_8.119644974219 chr17 74293827 74296247 + 8.119644974219 NA promoter-TSS (NM_133771) promoter-TSS (NM_133771) -174 NM_133771 76890 Mm.311874 NM_133771 ENSMUSG00000058704 Memo1 0610016J10Rik|D930048L02Rik mediator of cell motility 1 protein-coding common_peak1_52_516_-0.598278704871822_8.71488111787902_8.1156611675978 chr2 126497710 126498438 + 8.1156611675978 NA Intergenic Intergenic -6521 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak2_179_1216_0.330289807223615_10.4142583563255_8.11485101750795 chr16 16982771 16984510 + 8.11485101750795 NA exon (NM_001038663, exon 1 of 8) exon (NM_001038663, exon 1 of 8) 258 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak2_113_1143_-0.388760306041858_9.96549118375746_8.11456801904166 chr19 29366085 29368271 + 8.11456801904166 NA promoter-TSS (NM_021893) promoter-TSS (NM_021893) -260 NM_021893 60533 Mm.245363 NM_021893 ENSMUSG00000016496 Cd274 A530045L16Rik|B7h1|Pdcd1l1|Pdcd1lg1|Pdl1 CD274 antigen protein-coding common_peak2_282_2245_0.246999877042162_11.2566421509217_8.11195128016523 chr18 21000765 21003348 + 8.11195128016523 NA promoter-TSS (NM_001303011) promoter-TSS (NM_001303011) 99 NM_207623 56515 Mm.253542 NM_019706 ENSMUSG00000024317 Rnf138 2410015A17Rik|2810480D20Rik|STRIN|Trif|Trif-d ring finger protein 138 protein-coding common_peak1_67_299_0.627942192851002_8.54278978692138_8.11072251417727 chr5 41843609 41844777 + 8.11072251417727 NA 5' UTR (NM_001081422, exon 1 of 27) 5' UTR (NM_001081422, exon 1 of 27) 122 NM_001081422 665775 Mm.158726 NM_001081422 ENSMUSG00000061755 Bod1l A230054D04Rik|AI853319|FAM44A|mKIAA1327 biorientation of chromosomes in cell division 1-like protein-coding common_peak1_46_459_-0.642358963518358_8.5243105691852_8.10916931565701 chr8 75108851 75109424 + 8.10916931565701 NA promoter-TSS (NM_008566) promoter-TSS (NM_008566) -372 NM_001302540 17218 Mm.5048 NM_008566 ENSMUSG00000005410 Mcm5 AA617332|AI324988|AL033333|Cdc46|Mcmd5|P1-CDC46 minichromosome maintenance complex component 5 protein-coding common_peak2_81_806_-0.468369287025999_9.42224021976478_8.10908576279317 chr16 32176531 32178397 + 8.10908576279317 NA Intergenic Intergenic -2336 NM_001033539 328660 Mm.441006 NM_001033539 ENSMUSG00000075269 Bex6 B020003O03Rik brain expressed family member 6 protein-coding unique_peak2_12_146_-1.27086341138179_6.56424063914547_8.10901446871073-2 chr14 122557192 122557997 + 8.10901446871073 NA intron (NM_144844, intron 1 of 23) intron (NM_144844, intron 1 of 23) 23266 NM_144844 110821 Mm.23876 NM_144844 ENSMUSG00000041650 Pcca C79630 propionyl-Coenzyme A carboxylase, alpha polypeptide protein-coding unique_peak2_12_146_-1.27086341138179_6.56424063914547_8.10901446871073 chr13 67892342 67893233 + 8.10901446871073 NA Intergenic RLTR4_MM-int|LTR|ERV1 29461 NM_001001185 408058 Mm.177840 NM_001001185 ENSMUSG00000064063 BC048507 - cDNA sequence BC048507 protein-coding unique_peak1_12_12_2.22836921531348_4.81462432579783_8.10894577856963 chr6 115807057 115807454 + 8.10894577856963 NA TTS (NR_028546) TTS (NR_028546) 848 NR_028546 100217451 Mm.484708 NR_028546 ENSMUSG00000064563 Snora7a MBI-141 small nucleolar RNA, H/ACA box 7A snoRNA unique_peak1_12_12_2.22836921531348_4.81462432579783_8.10894577856963-2 chr7 49102317 49102569 + 8.10894577856963 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 143370 NM_001111016 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding unique_peak2_45_449_-0.648708075937172_8.48942715324845_8.10774692510279 chr8 79161592 79163576 + 8.10774692510279 NA intron (NM_001294279, intron 8 of 14) B1_Mus2|SINE|Alu 85999 NM_026315 67687 Mm.178707 NM_026315 ENSMUSG00000031682 1700011L22Rik - RIKEN cDNA 1700011L22 gene protein-coding common_peak2_93_485_0.504930895006595_9.17727795110908_8.10739746753342 chr1 92079082 92080907 + 8.10739746753342 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 100347 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_29_299_-0.820162257898178_7.81873756154679_8.10603667200833 chr8 72474529 72475246 + 8.10603667200833 NA intron (NM_138585, intron 1 of 17) CpG 346 NM_138585 27967 Mm.30136 NM_138585 ENSMUSG00000052488 Cherp 5730408I11Rik|D8Wsu96e|DAN16|Scaf6 calcium homeostasis endoplasmic reticulum protein protein-coding common_peak2_180_1226_0.328287781813456_10.4250634245696_8.10486736358883 chr19 61225414 61228480 + 8.10486736358883 NA intron (NM_009970, intron 3 of 11) CpG-7695 1471 NM_009970 12982 Mm.287228 NM_009970 ENSMUSG00000059326 Csf2ra CD116|Csfgmra|GM-CSF-Ra|GM-CSFR colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) protein-coding common_peak2_72_333_0.598614733911576_8.68301165942984_8.10300250100764 chr17 80289475 80290666 + 8.10300250100764 NA promoter-TSS (NM_194269) promoter-TSS (NM_194269) -142 NM_194269 378462 Mm.45208 NM_194269 ENSMUSG00000045257 Morn2 Mopt MORN repeat containing 2 protein-coding common_peak1_44_155_0.840776418702383_7.70579042821344_8.10249143513104 chr13 96388343 96388836 + 8.10249143513104 NA intron (NM_026173, intron 1 of 12) intron (NM_026173, intron 1 of 12) 295 NM_026173 67463 Mm.86472 NM_026173 ENSMUSG00000021671 Poc5 1200014M14Rik|AV144706 POC5 centriolar protein protein-coding unique_peak2_15_173_-1.14669023272356_6.86959837948695_8.10216867926462 chr16 27348969 27350183 + 8.10216867926462 NA intron (NM_198112, intron 4 of 4) intron (NM_198112, intron 4 of 4) 20663 NM_198166 224065 Mm.326918 NM_198166 ENSMUSG00000056423 Uts2b Gm538|U2B|Urp|Uts2d urotensin 2B protein-coding common_peak1_15_173_-1.14669023272356_6.86959837948695_8.10216867926462 chr2 34790295 34790691 + 8.10216867926462 NA intron (NM_145522, intron 4 of 7) intron (NM_145522, intron 4 of 7) 9419 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding common_peak1_201_2137_-0.278585632928678_10.9227533212562_8.1011361301666 chr15 96459496 96460994 + 8.1011361301666 NA intron (NM_028148, intron 1 of 14) CpG 598 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak1_120_1218_-0.374915565984764_10.0640246276278_8.09933189923152 chr14 50807099 50808435 + 8.09933189923152 NA promoter-TSS (NM_009632) promoter-TSS (NM_009632) 4 NR_002142 85029 NR_002142 ENSMUSG00000092837 Rpph1 Gm24821|H1RNA|Rmrp5|Rpr ribonuclease P RNA component H1 ncRNA common_peak1_120_1218_-0.374915565984764_10.0640246276278_8.09933189923152-2 chr5 147860039 147861378 + 8.09933189923152 NA promoter-TSS (NM_025624) promoter-TSS (NM_025624) 80 NM_025624 66537 Mm.332855 NM_025624 ENSMUSG00000029649 Pomp 2510048O06Rik|Ump1 proteasome maturation protein protein-coding common_peak1_38_382_-0.708257132317097_8.22707201576641_8.0985038976366 chr19 5816150 5816800 + 8.0985038976366 NA Intergenic B3A|SINE|B2 -13804 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak1_69_312_0.618039178777272_8.59903843632125_8.0984700166943 chr1 14306905 14308098 + 8.0984700166943 NA intron (NM_001310459, intron 1 of 17) intron (NM_001310459, intron 1 of 17) 2698 NM_001310459 14048 Mm.250185 NM_010164 ENSMUSG00000025932 Eya1 bor EYA transcriptional coactivator and phosphatase 1 protein-coding common_peak1_29_77_1.12325421373545_6.84702932572998_8.09539394211762 chr2 90583853 90584316 + 8.09539394211762 NA Intergenic Intergenic -3437 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak2_42_420_-0.671949252812444_8.38170179666017_8.09531211402127 chr3 152919589 152921582 + 8.09531211402127 NA intron (NM_012028, intron 2 of 4) intron (NM_012028, intron 2 of 4) 61622 NM_012028 26938 Mm.40915 NM_012028 ENSMUSG00000039037 St6galnac5 AI851940|Siat7e ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding common_peak1_106_1067_-0.401725512331781_9.85983317552166_8.09470177789617 chr7 80687984 80689429 + 8.09470177789617 NA exon (NM_173863, exon 1 of 15) exon (NM_173863, exon 1 of 15) 171 NM_173863 70461 Mm.392175 NM_173863 ENSMUSG00000030527 Crtc3 2610312F20Rik|6332415K15Rik|AI429792|BC011210|TORC3 CREB regulated transcription coactivator 3 protein-coding common_peak1_56_227_0.711608705385432_8.18869436685746_8.09354101134594 chr10 108092298 108093409 + 8.09354101134594 NA Intergenic Lx9|LINE|L1 -69547 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak1_14_164_-1.18427809283447_6.77418316782858_8.08674083224862 chrX 135724712 135725103 + 8.08674083224862 NA Intergenic Intergenic -4234 NM_030106 78478 Mm.391317 NM_030106 ENSMUSG00000060726 Tmsb15a 1700129I15Rik|Tb15a|Tmsbl1|Tmsl8 thymosin beta 15a protein-coding common_peak1_60_253_0.675834764274807_8.32660206890957_8.08537041059783 chr19 26747665 26748935 + 8.08537041059783 NA promoter-TSS (NM_026003) promoter-TSS (NM_026003) -103 NM_026003 67155 Mm.342988 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding common_peak2_51_507_-0.606651130944877_8.68535912129973_8.08417918009178 chr13 97197727 97199132 + 8.08417918009178 NA promoter-TSS (NM_010422) promoter-TSS (NM_010422) -72 NM_010422 15212 Mm.27816 NM_010422 ENSMUSG00000021665 Hexb - hexosaminidase B protein-coding unique_peak1_15_21_1.83682164448787_5.37784244088123_8.08317496341927-4 chr9 66251180 66251572 + 8.08317496341927 NA intron (NM_010019, intron 7 of 11) intron (NM_010019, intron 7 of 11) 93150 NM_010019 13143 Mm.304472 NM_010019 ENSMUSG00000032380 Dapk2 - death-associated protein kinase 2 protein-coding unique_peak1_15_21_1.83682164448787_5.37784244088123_8.08317496341927-5 chrX 159673861 159674261 + 8.08317496341927 NA intron (NM_001135727, intron 1 of 17) intron (NM_001135727, intron 1 of 17) -34540 NM_021389 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding unique_peak1_15_21_1.83682164448787_5.37784244088123_8.08317496341927 chr1 84404848 84405263 + 8.08317496341927 NA intron (NM_152915, intron 10 of 12) RMER13B|LTR|ERVK -120410 NM_001003948 98496 Mm.187470 NM_001003948 ENSMUSG00000045658 Pid1 5033414K04Rik|NYGGF4 phosphotyrosine interaction domain containing 1 protein-coding unique_peak1_15_21_1.83682164448787_5.37784244088123_8.08317496341927-2 chr10 110744845 110745284 + 8.08317496341927 NA promoter-TSS (NM_178609) promoter-TSS (NM_178609) -401 NM_178609 52679 Mm.11747 NM_178609 ENSMUSG00000020185 E2f7 A630014C11Rik|D10Ertd739e E2F transcription factor 7 protein-coding unique_peak1_15_21_1.83682164448787_5.37784244088123_8.08317496341927-3 chr10 111994037 111994445 + 8.08317496341927 NA intron (NM_028608, intron 1 of 5) MTB_Mm|LTR|ERVL-MaLR 3023 NM_028608 73690 Mm.173790 NM_028608 ENSMUSG00000056888 Glipr1 2410114O14Rik|RTVP-1|RTVP1|mRTVP-1 GLI pathogenesis-related 1 (glioma) protein-coding common_peak1_37_117_0.944333465221405_7.35480978197254_8.07485966660699-2 chr9 55326330 55327070 + 8.07485966660699 NA promoter-TSS (NM_172923) promoter-TSS (NM_172923) -249 NM_172923 244886 Mm.24361 NM_172923 ENSMUSG00000032313 Tmem266 9630029F15|AI118078|HVRP1 transmembrane protein 266 protein-coding common_peak1_37_117_0.944333465221405_7.35480978197254_8.07485966660699 chr6 127563637 127564381 + 8.07485966660699 NA Intergenic Intergenic -13966 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak2_37_117_0.944333465221405_7.35480978197254_8.07485966660699 chr5 113113958 113114974 + 8.07485966660699 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) -32882 NM_021352 12962 Mm.378899 NM_021352 ENSMUSG00000029352 Crybb3 AI852419 crystallin, beta B3 protein-coding common_peak2_346_3936_-0.201951000867686_11.8419054967252_8.07284639568742 chr16 5048541 5051822 + 8.07284639568742 NA promoter-TSS (NM_028720) promoter-TSS (NM_028720) 113 NM_026666 170644 Mm.66356 NM_026666 ENSMUSG00000039473 Ubn1 1110029L11Rik|2610108L02Rik|AA673476|AW124741 ubinuclein 1 protein-coding common_peak2_71_326_0.604763158747296_8.65552840487173_8.07271487003677 chr12 102642735 102645148 + 8.07271487003677 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 41079 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_80_796_-0.472093830997593_9.40238899849168_8.07061615028243 chr1 138170485 138172084 + 8.07061615028243 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 3842 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak2_36_112_0.959604688796222_7.2999813068133_8.07055308631143 chr8 126881342 126881989 + 8.07055308631143 NA Intergenic Intergenic 64256 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak1_36_112_0.959604688796222_7.2999813068133_8.07055308631143 chr12 79353565 79354247 + 8.07055308631143 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 56555 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak2_43_150_0.848005314555229_7.66240739660269_8.07026461569184 chr7 132754086 132755368 + 8.07026461569184 NA intron (NM_175268, intron 4 of 4) intron (NM_175268, intron 4 of 4) 32208 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak2_452_4182_0.182332618494799_12.1214885918914_8.06955510524383 chr7 126468406 126476288 + 8.06955510524383 NA exon (NM_011363, exon 2 of 10) exon (NM_011363, exon 2 of 10) 747 NR_110346 20399 Mm.8538 NM_011363 ENSMUSG00000030733 Sh2b1 AI425885|C530001K22Rik|Irip|Psm|SH2-B|SH2-Bb|Sh2bpsm1|mKIAA1299 SH2B adaptor protein 1 protein-coding common_peak2_97_972_-0.422807446684072_9.71489227143908_8.06736809803925 chr11 75208347 75211351 + 8.06736809803925 NA intron (NM_177708, intron 1 of 1) ID_B1|SINE|B4 15856 NM_177708 237847 Mm.82661 NM_177708 ENSMUSG00000045287 Rtn4rl1 Ngr3|Ngrh2|Ngrl2 reticulon 4 receptor-like 1 protein-coding common_peak2_54_535_-0.584798172071856_8.77369010442184_8.0661625578435 chr4 150964280 150965678 + 8.0661625578435 NA Intergenic B3A|SINE|B2 -32118 NM_011910 24111 Mm.89984 NM_011910 ENSMUSG00000028963 Uts2 UII|Ucn2|prepro-UII urotensin 2 protein-coding common_peak1_27_280_-0.847861570203001_7.71049553511943_8.06568490317363 chr6 125484978 125485620 + 8.06568490317363 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 9456 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak2_128_765_0.408661104482276_9.7855311341661_8.06536841690179 chr5 43868277 43870354 + 8.06536841690179 NA intron (NM_007646, intron 1 of 7) intron (NM_007646, intron 1 of 7) 506 NM_007646 12494 Mm.249873 NM_007646 ENSMUSG00000029084 Cd38 ADPRC 1|Cd38-rs1|I-19 CD38 antigen protein-coding common_peak1_351_4000_-0.199897925906226_11.8661959503925_8.06360289515106 chr4 120973026 120976535 + 8.06360289515106 NA intron (NM_133716, intron 6 of 9) intron (NM_133716, intron 6 of 9) -1458 NR_105982 102465614 NR_105982 ENSMUSG00000106436 Mir7015 mmu-mir-7015 microRNA 7015 ncRNA unique_peak2_24_253_-0.902669494635782_7.53734993945428_8.06208678908398 chr4 71287705 71289207 + 8.06208678908398 NA Intergenic RLTR14|LTR|ERV1 -753528 NM_172694 230316 Mm.251188 NM_172694 ENSMUSG00000039270 Megf9 4933405H16Rik|9630025C07|Egfl5|mKIAA0818 multiple EGF-like-domains 9 protein-coding common_peak1_24_253_-0.902669494635782_7.53734993945428_8.06208678908398 chr15 83122245 83122951 + 8.06208678908398 NA intron (NM_029101, intron 1 of 6) CpG 203 NM_029101 74778 Mm.30056 NM_029101 ENSMUSG00000018040 Rrp7a 1110014J01Rik|AA408146|Kheg1 ribosomal RNA processing 7 homolog A (S. cerevisiae) protein-coding common_peak2_24_253_-0.902669494635782_7.53734993945428_8.06208678908398 chr9 104002638 104003461 + 8.06208678908398 NA exon (NM_028721, exon 1 of 27) exon (NM_028721, exon 1 of 27) 505 NM_028721 74025 Mm.479273 NM_028721 ENSMUSG00000032558 Nphp3 3632410F03Rik|AI550417|C230078J01|D330020E01Rik|pcy nephronophthisis 3 (adolescent) protein-coding common_peak1_144_902_0.378186723910032_10.0076755394359_8.06196674088559 chr3 105686751 105688443 + 8.06196674088559 NA promoter-TSS (NM_017397) promoter-TSS (NM_017397) -26 NM_017397 53975 Mm.272826 NM_017397 ENSMUSG00000027905 Ddx20 GEMIN3|dp103 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 protein-coding common_peak2_102_1025_-0.411267131830314_9.7971814496919_8.06155552476817 chr5 31613425 31615513 + 8.06155552476817 NA intron (NM_025796, intron 1 of 3) intron (NM_025796, intron 1 of 3) 518 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_201_2136_-0.277910687867999_10.9224158487258_8.06141216479783 chr6 72957066 72959055 + 8.06141216479783 NA 5' UTR (NM_001039392, exon 1 of 2) 5' UTR (NM_001039392, exon 1 of 2) 172 NM_001039392 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding common_peak1_141_1448_-0.341070022523557_10.3303068682952_8.06111557177499 chr11 58927298 58928380 + 8.06111557177499 NA TTS (NM_138678) TTS (NM_138678) 9782 NM_138678 192194 Mm.22540 NM_138678 ENSMUSG00000020490 Btnl10 BUTR-1|Butr1 butyrophilin-like 10 protein-coding common_peak2_213_1542_0.294060383971395_10.7385525385564_8.0607225499544 chr7 17023926 17028479 + 8.0607225499544 NA intron (NM_011155, intron 1 of 12) L2b|LINE|L2 1712 NM_011155 19060 Mm.3294 NM_011155 ENSMUSG00000003099 Ppp5c AU020526|PP5 protein phosphatase 5, catalytic subunit protein-coding common_peak1_31_317_-0.790017380972831_7.91787426479794_8.06062272061045 chr13 52591194 52591913 + 8.06062272061045 NA intron (NM_001198977, intron 1 of 13) intron (NM_001198977, intron 1 of 13) -5329 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding unique_peak1_18_31_1.60036420339689_5.80018210169844_8.05906405841464 chr10 61251238 61251710 + 8.05906405841464 NA intron (NM_001081127, intron 2 of 21) B4A|SINE|B4 21964 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding unique_peak1_18_31_1.60036420339689_5.80018210169844_8.05906405841464-3 chr6 91105394 91105871 + 8.05906405841464 NA intron (NM_018815, intron 1 of 39) intron (NM_018815, intron 1 of 39) 11194 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding unique_peak1_18_31_1.60036420339689_5.80018210169844_8.05906405841464-2 chr2 117444430 117444791 + 8.05906405841464 NA Intergenic Intergenic -101733 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak2_100_1003_-0.414695360345315_9.76419587377811_8.05611296315499-2 chr14 20706769 20708565 + 8.05611296315499 NA 5' UTR (NM_001252082, exon 1 of 27) 5' UTR (NM_001252082, exon 1 of 27) 115 NM_001252082 268721 Mm.275082 NM_027996 ENSMUSG00000021819 Zswim8 2310021P13Rik|4832404P21Rik|Kiaa0913|mKIAA0913 zinc finger SWIM-type containing 8 protein-coding common_peak2_100_1003_-0.414695360345315_9.76419587377811_8.05611296315499 chr11 58903310 58904837 + 8.05611296315499 NA intron (NM_011758, intron 1 of 4) CpG 152 NM_011758 22698 Mm.127646 NM_011758 ENSMUSG00000037001 Zfp39 CTfin33|Zfp-39 zinc finger protein 39 protein-coding common_peak1_90_463_0.514364047592474_9.11516301892381_8.05604556672455 chr3 30995339 30996402 + 8.05604556672455 NA promoter-TSS (NM_008857) promoter-TSS (NM_008857) 99 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding common_peak2_126_1283_-0.364218792948257_10.1443200906482_8.05375472300032 chr1 135591786 135595841 + 8.05375472300032 NA Intergenic Intergenic -8458 NM_173437 215690 Mm.34977 NM_173437 ENSMUSG00000009418 Nav1 9530089B19|9930003A20Rik|C230080M11Rik|Pomfil3|Unc53h1|mKIAA1151|steerin-1 neuron navigator 1 protein-coding common_peak1_41_139_0.874803938039888_7.56668498596491_8.05348458355963 chr9 32720656 32721543 + 8.05348458355963 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 25057 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_82_404_0.54772777139636_8.93564198347017_8.05312649163818 chr11 98863650 98864715 + 8.05312649163818 NA intron (NM_197940, intron 1 of 7) intron (NM_197940, intron 1 of 7) 584 NM_197940 68524 Mm.28661 NM_197940 ENSMUSG00000038013 Wipf2 1110014J05Rik|5730509C05Rik|AA407487|Gm1176|Wich|Wire WAS/WASL interacting protein family, member 2 protein-coding common_peak2_58_575_-0.564398596400487_8.88772570324207_8.05032587151812 chr14 70780687 70782138 + 8.05032587151812 NA Intergenic Intergenic 7031 NM_010071 13449 Mm.243323 NM_010071 ENSMUSG00000022102 Dok2 DokR|Frip docking protein 2 protein-coding common_peak1_93_930_-0.432893958946419_9.64619037808558_8.05031417611703 chr7 125488330 125489907 + 8.05031417611703 NA intron (NM_026330, intron 1 of 7) L1ME3E|LINE|L1 2424 NM_026330 67711 Mm.4467 NM_026330 ENSMUSG00000030750 Nsmce1 2510027N19Rik NSE1 homolog, SMC5-SMC6 complex component protein-coding common_peak1_53_525_-0.590099111266351_8.74386943365913_8.04996238039654 chr5 140566518 140567399 + 8.04996238039654 NA Intergenic Intergenic -1891 NM_030022 77998 Mm.160040 NM_030022 ENSMUSG00000036586 Grifin E130101O17Rik galectin-related inter-fiber protein protein-coding unique_peak2_4_75_-2.01001790818552_5.24291855935082_8.04974452218779-3 chr19 6067295 6067951 + 8.04974452218779 NA TTS (NM_001081041) TTS (NM_001081041) 227 NM_028454 73166 Mm.489613 NM_028454 ENSMUSG00000024799 Tm7sf2 3110041O18Rik|ANG1|C14SR|Dhcr14 transmembrane 7 superfamily member 2 protein-coding unique_peak2_4_75_-2.01001790818552_5.24291855935082_8.04974452218779 chr11 83728410 83729111 + 8.04974452218779 NA Intergenic Intergenic -18180 NM_183249 66107 Mm.902 NM_183249 ENSMUSG00000051748 Wfdc21 1100001G20Rik|Wdnm1-like WAP four-disulfide core domain 21 protein-coding unique_peak2_4_75_-2.01001790818552_5.24291855935082_8.04974452218779-2 chr11 101732188 101732769 + 8.04974452218779 NA promoter-TSS (NM_144831) promoter-TSS (NM_144831) -478 NM_144831 217207 Mm.28186 NM_144831 ENSMUSG00000034931 Dhx8 Ddx8|mDEAH6|mKIAA4096 DEAH (Asp-Glu-Ala-His) box polypeptide 8 protein-coding unique_peak2_4_75_-2.01001790818552_5.24291855935082_8.04974452218779-4 chr5 24216227 24216856 + 8.04974452218779 NA Intergenic RLTR4_MM-int|LTR|ERV1 -40987 NR_030454 735274 NR_030454 ENSMUSG00000106252 Mir684-1 Mirn684-1 microRNA 684-1 ncRNA common_peak1_108_1088_-0.39704600318727_9.89026523712327_8.04955579278716 chr8 64946155 64947135 + 8.04955579278716 NA promoter-TSS (NM_001163747) promoter-TSS (NM_001163747) -540 NM_001163747 73067 Mm.294445 NM_028427 ENSMUSG00000025521 Tmem192 3110005G23Rik transmembrane protein 192 protein-coding common_peak2_62_266_0.660913228264228_8.39115254581967_8.04919115614152 chr4 132007510 132009134 + 8.04919115614152 NA intron (NM_183428, intron 1 of 20) intron (NM_183428, intron 1 of 20) 40756 NM_001128606 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding common_peak1_47_467_-0.629976940304953_8.55537624943093_8.0488213513988 chr1 191420477 191421217 + 8.0488213513988 NA Intergenic Intergenic -23806 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak1_30_82_1.09164277338738_6.92086081804062_8.0471640170955-2 chr7 75714176 75714706 + 8.0471640170955 NA intron (NM_029332, intron 17 of 36) intron (NM_029332, intron 17 of 36) -133897 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_30_82_1.09164277338738_6.92086081804062_8.0471640170955-2 chr4 20042020 20042603 + 8.0471640170955 NA intron (NM_010281, intron 1 of 8) CpG 259 NM_010281 14590 Mm.20461 NM_010281 ENSMUSG00000073987 Ggh gamma-GH gamma-glutamyl hydrolase protein-coding common_peak2_30_82_1.09164277338738_6.92086081804062_8.0471640170955 chr13 41583486 41584277 + 8.0471640170955 NA Intergenic L1MEb|LINE|L1 -22335 NM_001163572 621976 Mm.259830 NM_001163572 ENSMUSG00000087370 Tmem170b EG621976 transmembrane protein 170B protein-coding common_peak1_30_82_1.09164277338738_6.92086081804062_8.0471640170955 chr16 75920998 75921702 + 8.0471640170955 NA Intergenic Intergenic -12084 NM_023380 67742 Mm.131406 NM_023380 ENSMUSG00000022876 Samsn1 4930571B16Rik|930571B16Rik|Hacs1|SLy2 SAM domain, SH3 domain and nuclear localization signals, 1 protein-coding common_peak1_61_604_-0.547496816241294_8.96704292404131_8.04677972805938 chr14 57885829 57886981 + 8.04677972805938 NA intron (NM_029492, intron 1 of 12) intron (NM_029492, intron 1 of 12) 3857 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|ENSMUSG00000055956|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak1_20_217_-0.990709680978428_7.27282948428771_8.04568107040795-2 chr7 142385231 142385680 + 8.04568107040795 NA intron (NM_009983, intron 2 of 8) intron (NM_009983, intron 2 of 8) 2415 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak1_20_217_-0.990709680978428_7.27282948428771_8.04568107040795 chr6 127154102 127154630 + 8.04568107040795 NA intron (NR_040275, intron 1 of 1) intron (NR_040275, intron 1 of 1) -3318 NM_009829 12444 Mm.333406 NM_009829 ENSMUSG00000000184 Ccnd2 2600016F06Rik|AI256817|BF642806|C86853|Vin-1|Vin1|cD2 cyclin D2 protein-coding common_peak2_50_191_0.7627082764063_7.96631663892431_8.04523774083814 chr15 102115040 102116597 + 8.04523774083814 NA TTS (NM_001033277) TTS (NM_001033277) 12830 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak1_91_909_-0.438037308619835_9.61070408077614_8.04488811853456 chr9 101072928 101073987 + 8.04488811853456 NA Intergenic Intergenic -1305 NM_001100451 77853 Mm.326206 NM_001100451 ENSMUSG00000066415 Msl2 E130103E02Rik|Msl2l1|Rnf184 male-specific lethal 2 homolog (Drosophila) protein-coding common_peak1_129_774_0.405474331357652_9.80078966584043_8.04420454147791 chr4 102571737 102573298 + 8.04420454147791 NA intron (NM_019840, intron 6 of 14) intron (NM_019840, intron 6 of 14) 2457 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak1_152_1571_-0.326580208977866_10.4550953977697_8.04153786939342 chr8 25948437 25950146 + 8.04153786939342 NA intron (NM_029884, intron 14 of 17) MIR|SINE|MIR 27453 NM_029884 52120 Mm.28326 NM_029884 ENSMUSG00000037260 Hgsnat 9430010M12Rik|AW208455|D8Ertd354e|Tmem76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding common_peak2_102_555_0.472606811053232_9.35524447825012_8.04128109293461 chr11 70562112 70563628 + 8.04128109293461 NA promoter-TSS (NM_001045959) promoter-TSS (NM_001045959) -11 NM_001045964 50932 Mm.42967 NM_016713 ENSMUSG00000020827 Mink1 B55|MINK|Map4k6|Ysk2 misshapen-like kinase 1 (zebrafish) protein-coding common_peak1_13_15_2.05995243883157_5.02997621941578_8.04113441143625 chr8 84640127 84640483 + 8.04113441143625 NA TTS (NM_001252059) TTS (NM_001252059) 22547 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding unique_peak1_13_15_2.05995243883157_5.02997621941578_8.04113441143625 chr17 12722707 12723069 + 8.04113441143625 NA intron (NM_010515, intron 10 of 47) intron (NM_010515, intron 10 of 47) -18423 NR_002853 104103 Mm.26553 NR_002853 ENSMUSG00000078247 Airn 2810051F02Rik|2810434M15Rik|AI256653|AI597500|AW049873|Air|B930018I07Rik|D17Ertd663e|IGF2RAS antisense Igf2r RNA ncRNA unique_peak1_13_15_2.05995243883157_5.02997621941578_8.04113441143625-2 chr17 27618971 27619378 + 8.04113441143625 NA intron (NM_019837, intron 1 of 4) intron (NM_019837, intron 1 of 4) 3790 NM_001291046 56409 Mm.144699 NM_019837 ENSMUSG00000024213 Nudt3 1110011B09Rik|AA960325|Dipp|Dipp1 nudix (nucleotide diphosphate linked moiety X)-type motif 3 protein-coding common_peak2_103_1035_-0.408162420672911_9.8127270773501_8.04084857523476 chr5 123929961 123931369 + 8.04084857523476 NA promoter-TSS (NM_001134767) promoter-TSS (NM_001134767) -24 NM_001134767 208908 Mm.243679 NM_001134767 ENSMUSG00000061882 Ccdc62 AI661708|Gm150 coiled-coil domain containing 62 protein-coding common_peak1_17_190_-1.07274346616308_7.04105709495421_8.03993376617231-2 chr6 67399971 67400330 + 8.03993376617231 NA Intergenic Intergenic -24013 NM_008354 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak1_17_190_-1.07274346616308_7.04105709495421_8.03993376617231 chr4 132269509 132269887 + 8.03993376617231 NA TTS (NR_002865) TTS (NR_002865) 488 NR_002865 353373 Mm.424675 NR_002865 Rnu11 MBII-407|Mirn801|mir-801|mmu-mir-801 U11 small nuclear RNA snRNA unique_peak1_14_18_1.93411660796776_5.21498581742747_8.03946678051954 chr12 112591628 112592029 + 8.03946678051954 NA intron (NM_198411, intron 1 of 22) MTD|LTR|ERVL-MaLR 3044 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding unique_peak1_14_18_1.93411660796776_5.21498581742747_8.03946678051954-4 chr9 111141661 111142020 + 8.03946678051954 NA intron (NM_001164838, intron 3 of 14) ID_B1|SINE|B4 23729 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding common_peak1_14_18_1.93411660796776_5.21498581742747_8.03946678051954 chr7 141130852 141131178 + 8.03946678051954 NA promoter-TSS (NM_013782) promoter-TSS (NM_013782) -271 NM_013782 27388 Mm.293591 NM_013782 ENSMUSG00000025495 Ptdss2 AI481134|AI988017|PSS2 phosphatidylserine synthase 2 protein-coding unique_peak1_14_18_1.93411660796776_5.21498581742747_8.03946678051954-3 chr7 24461744 24462128 + 8.03946678051954 NA promoter-TSS (NM_011113) promoter-TSS (NM_011113) -564 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding unique_peak1_14_18_1.93411660796776_5.21498581742747_8.03946678051954-2 chr19 9954298 9954659 + 8.03946678051954 NA Intergenic Intergenic -26122 NR_073181 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak1_64_634_-0.533698261326633_9.04376365099621_8.03922755696004 chr19 40708478 40709014 + 8.03922755696004 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 48976 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak2_170_1775_-0.305782630646647_10.6415245510268_8.03881266594028 chr7 104289532 104293614 + 8.03881266594028 NA Intergenic RSINE1|SINE|B4 -3467 NM_001310602 667823 Mm.482375 NM_001310602 ENSMUSG00000060441 Trim5 EG667823|Gm8833 tripartite motif-containing 5 protein-coding common_peak1_366_4195_-0.194704229630446_11.937446847762_8.03702390846155 chr17 27554702 27558078 + 8.03702390846155 NA promoter-TSS (NM_001039356) promoter-TSS (NM_001039356) -184 NM_001166536 15361 Mm.4438 NM_016660 ENSMUSG00000046711 Hmga1 AL023995|Hmga1a|Hmga1b|Hmgi|Hmgiy|Hmgy high mobility group AT-hook 1 protein-coding common_peak2_105_578_0.464934538640232_9.40988680730935_8.03646557012759 chr2 129800298 129802188 + 8.03646557012759 NA non-coding (NR_029452, exon 1 of 1) non-coding (NR_029452, exon 1 of 1) 216 NR_029452 654409 Mm.305555 NR_029452 4932416H05Rik - RIKEN cDNA 4932416H05 gene ncRNA common_peak1_33_335_-0.762168850618233_8.01123299746964_8.03413330252924 chr1 88684088 88684804 + 8.03413330252924 NA Intergenic Intergenic 17745 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_33_335_-0.762168850618233_8.01123299746964_8.03413330252924-2 chr2 102874028 102874731 + 8.03413330252924 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 27286 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_28_289_-0.831245775502366_7.76428620226375_8.03007157552619 chr11 82183327 82183918 + 8.03007157552619 NA Intergenic Intergenic -3810 NM_011329 20290 Mm.1283 NM_011329 ENSMUSG00000020702 Ccl1 BF534335|I-309|Scya1|Tca-3 chemokine (C-C motif) ligand 1 protein-coding common_peak1_423_4953_-0.178799454244183_12.1849784261243_8.02772640847087 chr6 41552449 41556353 + 8.02772640847087 NA Intergenic Intergenic 32625 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak2_128_1304_-0.359972405050014_10.1698478889322_8.02703723626591 chr11 69681083 69683050 + 8.02703723626591 NA promoter-TSS (NM_030702) promoter-TSS (NM_030702) 18 NM_001163571 80886 Mm.284592 NM_030702 ENSMUSG00000005204 Senp3 AA408656|Smt3ip|Smt3ip1 SUMO/sentrin specific peptidase 3 protein-coding common_peak1_63_623_-0.535924333364369_9.01744005218006_8.02602953940376 chr2 9867264 9868249 + 8.02602953940376 NA intron (NM_008091, intron 4 of 5) intron (NM_008091, intron 4 of 5) 10844 NM_008091 14462 Mm.313866 NM_008091 ENSMUSG00000015619 Gata3 Gata-3|jal GATA binding protein 3 protein-coding common_peak1_56_554_-0.571845241687296_8.83042134039382_8.0247263484163 chr4 138326560 138327473 + 8.0247263484163 NA promoter-TSS (NM_026880) promoter-TSS (NM_026880) -720 NM_026880 68943 Mm.18539 NM_026880 ENSMUSG00000028756 Pink1 1190006F07Rik|AU042772|AW557854|BRPK|mFLJ00387 PTEN induced putative kinase 1 protein-coding common_peak2_93_486_0.501965436530034_9.17876068034736_8.02439400030601 chr3 88913492 88914733 + 8.02439400030601 NA promoter-TSS (NM_144898) promoter-TSS (NM_144898) -162 NM_144898 229524 Mm.440405 NM_144898 ENSMUSG00000068922 Msto1 BC008103|mst misato 1, mitochondrial distribution and morphology regulator protein-coding common_peak2_160_1660_-0.315839444603398_10.5399166356607_8.02426257548265 chr6 5296856 5299042 + 8.02426257548265 NA intron (NM_183308, intron 1 of 8) intron (NM_183308, intron 1 of 8) 424 NM_183308 330260 Mm.126984 NM_183308 ENSMUSG00000032667 Pon2 6330405I24Rik|AI481612 paraoxonase 2 protein-coding common_peak2_359_3094_0.210291877022071_11.7008696326127_8.02333427217478 chr17 7873020 7878913 + 8.02333427217478 NA Intergenic LTR72_RN|LTR|ERV1 -50034 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding common_peak1_35_353_-0.736307877023973_8.09945161157101_8.02327804662739 chr1 21382472 21383126 + 8.02327804662739 NA promoter-TSS (NM_001113187) promoter-TSS (NM_001113187) -757 NM_001113187 98582 Mm.326336 NM_001113187 ENSMUSG00000085079 Khdc1b AU014713|AU015226|AU024076|AY238603|C85331|C86372|C88118|Khdc1|Khdc1c KH domain containing 1B protein-coding common_peak2_277_2195_0.247934752973759_11.2246297154921_8.02211404402214 chr4 134105306 134110211 + 8.02211404402214 NA intron (NM_026257, intron 1 of 14) intron (NM_026257, intron 1 of 14) 5175 NM_026257 67586 Mm.282029 NM_026257 ENSMUSG00000012126 Ubxn11 4930506L07Rik|D4Bwg1540e|Soc|Soci|Ubxd5 UBX domain protein 11 protein-coding common_peak2_60_594_-0.552226407148334_8.94063265462114_8.02174361081519 chr1 62874493 62876961 + 8.02174361081519 NA Intergenic Intergenic -80995 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA common_peak1_76_754_-0.483611293439376_9.31852718749276_8.02151590057851 chr10 91081965 91082840 + 8.02151590057851 NA promoter-TSS (NM_026166) promoter-TSS (NM_026166) 341 NM_001042558 11783 Mm.220289 NM_009684 ENSMUSG00000019979 Apaf1 6230400I06Rik|Apaf-1|Apaf1l|fog|mKIAA0413 apoptotic peptidase activating factor 1 protein-coding common_peak1_114_650_0.440052657806195_9.56654006206873_8.02087303363852 chr10 80741288 80742470 + 8.02087303363852 NA intron (NM_007460, intron 1 of 30) CpG 332 NM_007460 11776 Mm.27082 NM_007460 ENSMUSG00000020198 Ap3d1 AA407035|Ap3d|Bolvr|mBLVR1|mh|mocha adaptor-related protein complex 3, delta 1 subunit protein-coding common_peak2_114_650_0.440052657806195_9.56654006206873_8.02087303363852-2 chr2 153224428 153226054 + 8.02087303363852 NA exon (NM_198617, exon 1 of 1) exon (NM_198617, exon 1 of 1) 200 NM_198617 241732 Mm.277243 NM_198617 ENSMUSG00000074671 Tspyl3 AW212607|Gm36 TSPY-like 3 protein-coding common_peak2_114_650_0.440052657806195_9.56654006206873_8.02087303363852 chr13 52928709 52930307 + 8.02087303363852 NA exon (NM_016709, exon 1 of 10) exon (NM_016709, exon 1 of 10) 169 NM_016709 11992 Mm.252034 NM_016709 ENSMUSG00000021460 Auh C77140|W91705 AU RNA binding protein/enoyl-coenzyme A hydratase protein-coding common_peak1_150_1547_-0.327669371158859_10.432355070565_8.01887402473738 chr12 102293777 102295382 + 8.01887402473738 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 10938 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_305_2495_0.233015385604848_11.4019099116647_8.01783954976694 chr2 60877311 60881956 + 8.01783954976694 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 1805 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_91_471_0.509042377104382_9.13716423791403_8.01647244766834 chr3 14892588 14894862 + 8.01647244766834 NA intron (NM_009801, intron 2 of 6) intron (NM_009801, intron 2 of 6) 7299 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding common_peak2_85_426_0.534247221819815_9.0052158705304_8.01239168394902 chr17 70985742 70988202 + 8.01239168394902 NA intron (NM_023402, intron 1 of 3) intron (NM_023402, intron 1 of 3) 3544 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak2_131_791_0.401187949953981_9.8299505950566_8.01235236298406 chr5 114921430 114923910 + 8.01235236298406 NA promoter-TSS (NM_145209) promoter-TSS (NM_145209) -570 NM_145209 231655 Mm.95479 NM_145209 ENSMUSG00000041827 Oasl1 7530414C13Rik|oasl9 2'-5' oligoadenylate synthetase-like 1 protein-coding common_peak2_309_3459_-0.215156219725104_11.6489782126615_8.0122608354631 chr1 171627076 171632776 + 8.0122608354631 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 11974 NR_106151 102465784 NR_106151 ENSMUSG00000098316 Mir7683 Gm27950|mmu-mir-7683 microRNA 7683 ncRNA common_peak2_31_87_1.06343395567423_6.99114859647441_8.01013540521348 chr2 175869138 175869879 + 8.01013540521348 NA intron (NM_001177480, intron 1 of 4) RMER17B|LTR|ERVK 263 NM_001164689 626832 Mm.441314 NM_001164689 ENSMUSG00000078887 Gm6710 1600017I02Rik|2310011F05Rik|2900089K14Rik|3100002L24Rik|WF-4 predicted gene 6710 protein-coding common_peak2_243_2637_-0.247484775831861_11.2414864613356_8.00709797706435 chr14 70275096 70283023 + 8.00709797706435 NA intron (NM_001304992, intron 1 of 12) intron (NM_001304992, intron 1 of 12) 10438 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding unique_peak2_25_262_-0.88349774465137_7.59717011696662_8.00688552091276 chr8 122564037 122565471 + 8.00688552091276 NA Intergenic Intergenic -3261 NM_026014 67177 Mm.21873 NM_026014 ENSMUSG00000006585 Cdt1 2610318F11Rik|AW545653|C76791|Ris2 chromatin licensing and DNA replication factor 1 protein-coding common_peak1_42_419_-0.668518347412173_8.37998634396004_8.00628873618949-2 chr7 139187774 139188521 + 8.00628873618949 NA exon (NM_021302, exon 1 of 12) exon (NM_021302, exon 1 of 12) 347 NM_021302 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding common_peak1_42_419_-0.668518347412173_8.37998634396004_8.00628873618949 chr11 86605994 86606872 + 8.00628873618949 NA intron (NM_029478, intron 9 of 11) B3|SINE|B2 -22275 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_80_795_-0.470282537550771_9.40148335176826_8.00582502947189 chr11 87737405 87738223 + 8.00582502947189 NA intron (NM_009296, intron 1 of 4) CpG 249 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding common_peak2_57_234_0.698758679133926_8.22589628613196_8.00520749351561 chr2 178525166 178526594 + 8.00520749351561 NA Intergenic A-rich|Low_complexity|Low_complexity 95365 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak1_446_4112_0.183084161760524_12.0975174373806_8.00512940812572 chr6 87532035 87536580 + 8.00512940812572 NA Intergenic L2|LINE|L2 -1048 NM_001286610 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak1_72_334_0.594301741040493_8.68516815586538_8.00310749742851 chr14 54426348 54427284 + 8.00310749742851 NA promoter-TSS (NM_026851) promoter-TSS (NM_026851) -93 NM_026851 68836 Mm.248163 NM_026851 ENSMUSG00000010406 Mrpl52 1110047B07Rik mitochondrial ribosomal protein L52 protein-coding common_peak1_24_55_1.27866027007878_6.44668505709699_8.0016254837014 chr2 170184775 170185219 + 8.0016254837014 NA Intergenic Intergenic -42322 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_209_2229_-0.270635452944491_10.9875102683354_8.00127464816938 chr7 141454380 141456450 + 8.00127464816938 NA non-coding (NR_028142, exon 1 of 10) non-coding (NR_028142, exon 1 of 10) 227 NM_001163689 66853 Mm.29998 NM_025802 ENSMUSG00000025509 Pnpla2 0610039C21Rik|1110001C14Rik|Atgl|TTS-2.2 patatin-like phospholipase domain containing 2 protein-coding common_peak1_29_298_-0.815345241600402_7.8163290533979_8.00077205674785-3 chr7 81860861 81861384 + 8.00077205674785 NA intron (NR_111910, intron 1 of 7) intron (NR_111910, intron 1 of 7) -1565 NM_001291282 107769 Mm.221412 NM_145375 ENSMUSG00000038623 Tm6sf1 AI428514|BC023123|C630016D09Rik transmembrane 6 superfamily member 1 protein-coding common_peak1_29_298_-0.815345241600402_7.8163290533979_8.00077205674785-2 chr2 128499651 128500214 + 8.00077205674785 NA Intergenic Intergenic -70581 NR_028590 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_29_298_-0.815345241600402_7.8163290533979_8.00077205674785 chr19 24961076 24961650 + 8.00077205674785 NA non-coding (NR_033744, exon 1 of 15) non-coding (NR_033744, exon 1 of 15) 253 NR_033744 226043 Mm.272127 NM_146097 ENSMUSG00000024878 Cbwd1 AV349248|BC018472 COBW domain containing 1 protein-coding common_peak1_37_372_-0.716055305671991_8.18500416741924_7.99917400609617 chrX 164018390 164019228 + 7.99917400609617 NA intron (NM_181315, intron 1 of 7) intron (NM_181315, intron 1 of 7) 9201 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak1_26_270_-0.859941474514276_7.65217830409673_7.99789287234983 chr2 147009854 147010425 + 7.99789287234983 NA Intergenic ORR1D2|LTR|ERVL-MaLR -2921 NM_011917 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding unique_peak2_16_181_-1.10425837922452_6.95566545058643_7.99692423545645 chr14 53903666 53905074 + 7.99692423545645 NA Intergenic MTEa|LTR|ERVL-MaLR 349559 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_212_2264_-0.268001272933297_11.0112946984669_7.99670992619807 chr13 54208604 54210284 + 7.99670992619807 NA intron (NM_001010973, intron 1 of 2) intron (NM_001010973, intron 1 of 2) 17315 NM_008286 15466 Mm.57243 NM_008286 ENSMUSG00000034987 Hrh2 - histamine receptor H2 protein-coding common_peak2_223_1642_0.28428491862692_10.8242592242635_7.99568459668434 chr10 57794010 57796546 + 7.99568459668434 NA intron (NM_020561, intron 1 of 7) intron (NM_020561, intron 1 of 7) 734 NM_020561 57319 Mm.2379 NM_020561 ENSMUSG00000019872 Smpdl3a 0610010C24Rik|AI529588|ASM3A|ASML3|ASML3A sphingomyelin phosphodiesterase, acid-like 3A protein-coding common_peak1_50_496_-0.60943126443483_8.65238640934487_7.99090157482144 chr9 64788578 64789470 + 7.99090157482144 NA Intergenic Intergenic -21987 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak2_93_929_-0.431343507383019_9.64541515230388_7.99041575273639 chr5 124444556 124447278 + 7.99041575273639 NA promoter-TSS (NM_001310727) promoter-TSS (NM_001310727) 418 NM_001310723 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding common_peak1_39_391_-0.696963305298075_8.26622819146617_7.98889951902669 chr3 79628171 79628856 + 7.98889951902669 NA promoter-TSS (NM_029482) promoter-TSS (NM_029482) 254 NM_025794 66841 Mm.28336 NM_025794 ENSMUSG00000027809 Etfdh 0610010I20Rik|AV001013 electron transferring flavoprotein, dehydrogenase protein-coding common_peak1_39_391_-0.696963305298075_8.26622819146617_7.98889951902669-2 chr7 128180318 128181022 + 7.98889951902669 NA intron (NM_001029872, intron 5 of 30) intron (NM_001029872, intron 5 of 30) 6724 NM_001029872 381924 Mm.334257 NM_001029872 ENSMUSG00000070369 Itgad Cd11d integrin, alpha D protein-coding common_peak1_94_494_0.49718507530824_9.19987725262109_7.98842413858818 chr3 88913432 88914755 + 7.98842413858818 NA promoter-TSS (NM_144898) promoter-TSS (NM_144898) -143 NM_144898 229524 Mm.440405 NM_144898 ENSMUSG00000068922 Msto1 BC008103|mst misato 1, mitochondrial distribution and morphology regulator protein-coding common_peak1_74_348_0.583066482080014_8.73861646724966_7.98830337831176 chr11 5004566 5006095 + 7.98830337831176 NA intron (NM_001243044, intron 1 of 21) intron (NM_001243044, intron 1 of 21) 18506 NM_007454 11764 Mm.274816 NM_007454 ENSMUSG00000009090 Ap1b1 Adtb1|b2b1660Clo adaptor protein complex AP-1, beta 1 subunit protein-coding common_peak1_104_571_0.46570889389843_9.3927257837276_7.98656562043161 chr17 46383330 46384537 + 7.98656562043161 NA exon (NM_021346, exon 1 of 8) exon (NM_021346, exon 1 of 8) 167 NM_021346 57908 Mm.439916 NM_021346 ENSMUSG00000015597 Zfp318 2610034E08Rik|D530032D06Rik|TZF|Znf318 zinc finger protein 318 protein-coding common_peak1_52_203_0.743316423471617_8.0440835537073_7.986485133884 chr11 74576247 74577194 + 7.986485133884 NA intron (NM_001015046, intron 1 of 24) B1_Mus1|SINE|Alu 13438 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_52_203_0.743316423471617_8.0440835537073_7.986485133884 chr5 34973301 34974390 + 7.986485133884 NA intron (NM_173402, intron 2 of 16) L1MB3|LINE|L1 24397 NM_173402 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak1_70_693_-0.505632306731243_9.18597569921264_7.98479129145237 chr3 108209922 108211036 + 7.98479129145237 NA promoter-TSS (NM_001289545) promoter-TSS (NM_001289545) 48 NM_001289545 72522 Mm.187326 NM_175183 ENSMUSG00000048997 Atxn7l2 2610528J18Rik ataxin 7-like 2 protein-coding common_peak2_316_2615_0.227768132760767_11.4670308918785_7.98466017898677 chr2 144008904 144011363 + 7.98466017898677 NA intron (NM_024281, intron 1 of 23) CpG 1130 NM_133626 81910 Mm.13705 NM_024281 ENSMUSG00000027422 Rrbp1 1700087N07Rik|5730465C04Rik|ES/130|mKIAA1398|mRRp0|mRRp1.8|mRRp10|mRRp15a|mRRp15b|mRRp16.8|mRRp2|mRRp41|mRRp47|mRRp5.4|p180 ribosome binding protein 1 protein-coding common_peak1_32_92_1.03816113655285_7.05823937938445_7.98281077530359 chr4 47251344 47252088 + 7.98281077530359 NA intron (NM_009928, intron 5 of 39) intron (NM_009928, intron 5 of 39) 43704 NM_009928 12819 Mm.233547 NM_009928 ENSMUSG00000028339 Col15a1 - collagen, type XV, alpha 1 protein-coding common_peak1_32_92_1.03816113655285_7.05823937938445_7.98281077530359-2 chrX 36984686 36985281 + 7.98281077530359 NA intron (NM_001177323, intron 1 of 9) intron (NM_001177323, intron 1 of 9) 4712 NM_001177324 56526 Mm.260036 NM_019942 ENSMUSG00000050379 Sept6 2810035H17Rik|C920001C06Rik|Sep6|mKIAA0128 septin 6 protein-coding unique_peak2_10_128_-1.37804182391566_6.32220634346542_7.98098514459759 chr10 19518211 19519377 + 7.98098514459759 NA Intergenic Intergenic -73164 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding unique_peak2_49_486_-0.615150458759601_8.62020273270254_7.98033433227409 chr4 117219669 117221743 + 7.98033433227409 NA intron (NM_001145637, intron 7 of 12) PB1D7|SINE|Alu 31211 NM_001145637 381544 Mm.23504 NM_001033774 ENSMUSG00000060268 Gm1661 Gm1662|Ncrna00082 predicted gene 1661 protein-coding common_peak1_224_2407_-0.259335452316749_11.1039519506013_7.97825570740857 chr3 142495861 142498384 + 7.97825570740857 NA intron (NM_153564, intron 1 of 10) intron (NM_153564, intron 1 of 10) 188 NM_153564 229898 Mm.459245 NM_153564 ENSMUSG00000105504 Gbp5 5330409J06Rik|Gbp5a guanylate binding protein 5 protein-coding common_peak1_109_1097_-0.392759009432927_9.90428283428874_7.97695616542149 chr17 47520956 47522570 + 7.97695616542149 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 16712 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_118_1194_-0.375722532628467_10.0349336365539_7.9743202586483 chr7 4792283 4793841 + 7.9743202586483 NA promoter-TSS (NM_009081) promoter-TSS (NM_009081) 97 NM_009081 19943 Mm.379002 NM_009081 ENSMUSG00000030432 Rpl28 D7Wsu21e ribosomal protein L28 protein-coding common_peak2_96_960_-0.423054257410341_9.69686549206858_7.97400506555327 chr1 86503042 86505421 + 7.97400506555327 NA Intergenic CpG -22505 NM_008972 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak1_61_603_-0.545110223404416_8.96584962762287_7.97260690806502 chr4 129696295 129697305 + 7.97260690806502 NA promoter-TSS (NM_199305) promoter-TSS (NM_199305) 38 NM_199305 230770 Mm.257157 NM_199305 ENSMUSG00000053730 Tmem39b 6330509E05Rik|BC037095 transmembrane protein 39b protein-coding common_peak2_90_464_0.511258136724653_9.11671597435772_7.97139403483763 chr17 34179280 34181423 + 7.97139403483763 NA Intergenic Intergenic 6979 NM_013585 16912 Mm.390983 NM_013585 ENSMUSG00000096727 Psmb9 Lmp-2|Lmp2 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) protein-coding common_peak2_90_464_0.511258136724653_9.11671597435772_7.97139403483763-2 chr2 173436058 173437489 + 7.97139403483763 NA Intergenic L1M4|LINE|L1 -85819 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding common_peak2_60_254_0.670166014188115_8.32943644395291_7.97116333006318 chr6 119847415 119848557 + 7.97116333006318 NA promoter-TSS (NR_030776) promoter-TSS (NR_030776) 164 NM_053204 111173 Mm.288860 NM_053204 ENSMUSG00000030172 Erc1 4930404L01Rik|5033405M01Rik|9630025C19Rik|B430107L16Rik|CAST2|ELKS|Elks1|RAB6IP2A|RAB6IP2B|Rab6ip2|mKIAA1081 ELKS/RAB6-interacting/CAST family member 1 protein-coding common_peak1_53_524_-0.587353734527534_8.74249674528972_7.97044984358364 chr9 32538115 32539076 + 7.97044984358364 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 2857 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_126_750_0.409541596659773_9.75743989584416_7.96727349929882 chr6 137735021 137735812 + 7.96727349929882 NA exon (NM_011499, exon 1 of 10) exon (NM_011499, exon 1 of 10) 334 NM_011499 20901 Mm.22584 NM_011499 ENSMUSG00000030224 Strap AW557906|C78091|C79202|Unrip serine/threonine kinase receptor associated protein protein-coding common_peak1_64_633_-0.531424509806511_9.04262677523615_7.96684827229149-2 chr8 70838874 70839563 + 7.96684827229149 NA exon (NM_027560, exon 1 of 8) exon (NM_027560, exon 1 of 8) 502 NM_027560 70807 Mm.24215 NM_027560 ENSMUSG00000002910 Arrdc2 4632416I05Rik|Ilad1 arrestin domain containing 2 protein-coding common_peak1_64_633_-0.531424509806511_9.04262677523615_7.96684827229149 chr2 181693018 181694026 + 7.96684827229149 NA 5' UTR (NM_001291208, exon 1 of 5) 5' UTR (NM_001291208, exon 1 of 5) 288 NM_001291206 56470 Mm.274366 NM_026446 ENSMUSG00000002458 Rgs19 2610042F04Rik|AI324841|AW547781|GAIP regulator of G-protein signaling 19 protein-coding unique_peak2_15_172_-1.13837496451156_6.86544074538095_7.96488789562598 chr4 140995956 140996812 + 7.96488789562598 NA exon (NM_001164366, exon 9 of 29) exon (NM_001164366, exon 9 of 29) 9511 NM_001164366 74772 Mm.205625 NM_029097 ENSMUSG00000036622 Atp13a2 1110012E06Rik|AA589443 ATPase type 13A2 protein-coding common_peak2_15_172_-1.13837496451156_6.86544074538095_7.96488789562598 chr12 112648201 112649451 + 7.96488789562598 NA intron (NM_001161737, intron 2 of 2) intron (NM_001161737, intron 2 of 2) 3998 NM_013929 30954 Mm.289812 NM_013929 ENSMUSG00000064326 Siva1 CD27bp|Siva SIVA1, apoptosis-inducing factor protein-coding common_peak2_134_817_0.394356120776166_9.87313509332983_7.96451918095159 chr19 6014426 6016288 + 7.96451918095159 NA promoter-TSS (NM_007600) promoter-TSS (NM_007600) -110 NM_007600 12333 Mm.6221 NM_007600 ENSMUSG00000024942 Capn1 Capa-1|Capa1|mu-calpin calpain 1 protein-coding common_peak1_133_1357_-0.350111752908653_10.2322118877904_7.96410085757151 chr11 106084499 106085484 + 7.96410085757151 NA promoter-TSS (NM_011947) promoter-TSS (NM_011947) 89 NM_011947 26406 Mm.27041 NM_011947 ENSMUSG00000020700 Map3k3 AW548911|MAPKKK3|Mekk3|mKIAA4031 mitogen-activated protein kinase kinase kinase 3 protein-coding common_peak1_33_97_1.01543872804532_7.12242920813787_7.9639498985892-2 chr7 128138877 128139577 + 7.9639498985892 NA intron (NM_021334, intron 14 of 29) PB1D11|SINE|Alu 9659 NM_021334 16411 Mm.22378 NM_021334 ENSMUSG00000030789 Itgax AI449405|Cd11c|Cr4|N418 integrin alpha X protein-coding common_peak1_33_97_1.01543872804532_7.12242920813787_7.9639498985892 chr14 73381197 73382098 + 7.9639498985892 NA intron (NM_008410, intron 1 of 5) intron (NM_008410, intron 1 of 5) 3624 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak2_18_198_-1.03626041714676_7.11849441197027_7.9639498985892 chr2 52319476 52320332 + 7.9639498985892 NA intron (NM_010889, intron 9 of 156) intron (NM_010889, intron 9 of 156) 18894 NM_010889 17996 Mm.389247 NM_010889 ENSMUSG00000026950 Neb AI595938 nebulin protein-coding common_peak1_122_1237_-0.368217817995554_10.0896866902165_7.96365382304681 chr9 114025736 114026849 + 7.96365382304681 NA intron (NM_178624, intron 1 of 14) intron (NM_178624, intron 1 of 14) 459 NM_178624 72179 Mm.386808 NM_178624 ENSMUSG00000032507 Fbxl2 2810423A21Rik|Fbl3 F-box and leucine-rich repeat protein 2 protein-coding common_peak1_46_168_0.802251651143833_7.8020052618541_7.96337319027815 chr7 16452831 16453491 + 7.96337319027815 NA exon (NM_026938, exon 1 of 3) exon (NM_026938, exon 1 of 3) 382 NM_026938 69094 Mm.29633 NM_026938 ENSMUSG00000019158 Tmem160 1810008O21Rik transmembrane protein 160 protein-coding common_peak1_217_1583_0.288997926636382_10.7738555833978_7.96177071321476 chr7 127013515 127015151 + 7.96177071321476 NA TTS (NM_030240) TTS (NM_030240) 261 NM_080638 78388 Mm.228797 NM_080638 ENSMUSG00000030681 Mvp 2310009M24Rik|LRP|VAULT1 major vault protein protein-coding common_peak1_129_1314_-0.357320252660411_10.1821869578495_7.96069585967333 chr18 9957426 9958831 + 7.96069585967333 NA promoter-TSS (NM_153552) promoter-TSS (NM_153552) -52 NM_153552 225160 Mm.219648 NM_153552 ENSMUSG00000024287 Thoc1 3110002N20Rik|AW107452|NMP-84 THO complex 1 protein-coding common_peak1_44_156_0.831557888673005_7.71039969322813_7.95726139085819 chr2 94157237 94157948 + 7.95726139085819 NA intron (NM_019657, intron 1 of 10) intron (NM_019657, intron 1 of 10) 317 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding common_peak2_27_279_-0.842718266927042_7.70792388348145_7.95726139085819 chr16 58669717 58670881 + 7.95726139085819 NA promoter-TSS (NM_007757) promoter-TSS (NM_007757) 91 NM_007757 12892 Mm.291519 NM_007757 ENSMUSG00000022742 Cpox CPX|Cpo|HCP|cac|nct coproporphyrinogen oxidase protein-coding common_peak2_107_1076_-0.3973703453319_9.87411736187826_7.95637611808521 chr5 110106898 110109327 + 7.95637611808521 NA promoter-TSS (NM_145147) promoter-TSS (NM_145147) 85 NM_145147 107999 Mm.86267 NM_145147 ENSMUSG00000033434 Gtpbp6 AV119224|Pgbpll|pgpl GTP binding protein 6 (putative) protein-coding common_peak2_120_700_0.423296210624825_9.66491873932303_7.95512248006542 chr17 47628283 47630413 + 7.95512248006542 NA Intergenic CpG -1342 NM_198421 224836 Mm.59393 NM_198421 ENSMUSG00000090115 Usp49 C330046L10Rik|Gm545 ubiquitin specific peptidase 49 protein-coding common_peak2_73_341_0.588543447511869_8.71212423864183_7.95493459579409 chr5 123983973 123986036 + 7.95493459579409 NA intron (NM_145070, intron 1 of 31) B1_Mur1|SINE|Alu 11376 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding unique_peak2_8_110_-1.51634281566379_6.03624445851821_7.95446039760661 chr3 49377400 49378014 + 7.95446039760661 NA Intergenic Intergenic 379609 NM_130448 73173 Mm.87246 NM_130448 ENSMUSG00000037892 Pcdh18 3110038E07Rik|BB095589|PCDH68L protocadherin 18 protein-coding unique_peak1_20_39_1.45554654891114_6.04970136934293_7.95446039760659-2 chr9 21124216 21124697 + 7.95446039760659 NA exon (NM_018793, exon 5 of 25) exon (NM_018793, exon 5 of 25) 6819 NM_018793 54721 Mm.20249 NM_018793 ENSMUSG00000032175 Tyk2 JTK1 tyrosine kinase 2 protein-coding unique_peak1_20_39_1.45554654891114_6.04970136934293_7.95446039760659 chr6 114781532 114782061 + 7.95446039760659 NA intron (NM_028835, intron 18 of 18) intron (NM_028835, intron 18 of 18) 138699 NM_001253717 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding common_peak1_20_39_1.45554654891114_6.04970136934293_7.95446039760659 chr17 17607428 17607812 + 7.95446039760659 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 16869 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_95_502_0.492585500659281_9.22070734013517_7.95383911733274 chr6 119902082 119903246 + 7.95383911733274 NA promoter-TSS (NM_011236) promoter-TSS (NM_011236) -34 NM_001166382 19365 Mm.149 NM_011236 ENSMUSG00000030166 Rad52 Rad52yh RAD52 homolog, DNA repair protein protein-coding common_peak1_281_2239_0.24459489782069_11.2515804658553_7.95342136401122 chr4 152189342 152192530 + 7.95342136401122 NA intron (NM_001146057, intron 1 of 8) intron (NM_001146057, intron 1 of 8) 4802 NM_001146057 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak1_110_1108_-0.391125482797014_9.9194809087632_7.95243413498664 chr7 24081445 24083047 + 7.95243413498664 NA intron (NM_001289637, intron 1 of 3) CpG 349 NM_001289637 210135 Mm.32254 NM_172483 ENSMUSG00000057101 Zfp180 2310040I01Rik|AI852378|D130011P11|HHZ168 zinc finger protein 180 protein-coding common_peak2_222_1633_0.28429160580872_10.81633807105_7.95219180943818 chr18 60499011 60502507 + 7.95219180943818 NA intron (NM_134133, intron 1 of 1) intron (NM_134133, intron 1 of 1) 1224 NM_134133 106878 Mm.273197 NM_134133 ENSMUSG00000038059 Smim3 2010002N04Rik|AI195350|AW561905|Nid67|cI-41 small integral membrane protein 3 protein-coding common_peak2_159_1036_0.352770982376619_10.1945856700015_7.95189163442808 chr16 4076775 4078636 + 7.95189163442808 NA exon (NM_026508, exon 1 of 18) exon (NM_026508, exon 1 of 18) 105 NM_026508 68015 Mm.123366 NM_026508 ENSMUSG00000005981 Trap1 2410002K23Rik|HSP75 TNF receptor-associated protein 1 protein-coding unique_peak1_22_47_1.35349830337235_6.26171165240733_7.94674065425882 chr11 121551353 121551800 + 7.94674065425882 NA intron (NM_029878, intron 15 of 38) intron (NM_029878, intron 15 of 38) -32234 NM_178763 319530 Mm.11395 NM_178763 ENSMUSG00000039238 Zfp750 A030007D23Rik|Znf750 zinc finger protein 750 protein-coding unique_peak1_28_73_1.13920994888362_6.77905834007076_7.94602457805673 chr10 118058974 118059773 + 7.94602457805673 NA Intergenic MTE2b|LTR|ERVL-MaLR -82414 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak2_28_73_1.13920994888362_6.77905834007076_7.94602457805673 chr10 62325864 62326512 + 7.94602457805673 NA intron (NM_010438, intron 4 of 21) B1_Mur4|SINE|Alu 14233 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak1_32_325_-0.771408206570197_7.96302405094598_7.94472718108733 chr12 79646745 79647123 + 7.94472718108733 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 277799 NR_131075 77290 Mm.395042 NR_131073 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA common_peak1_13_154_-1.21617196644267_6.6680384220529_7.94316934276509 chr3 130715039 130715420 + 7.94316934276509 NA Intergenic Intergenic -5785 NM_025509 66357 Mm.300697 NM_025509 ENSMUSG00000041084 Ostc 2310008M10Rik|5730557H03Rik oligosaccharyltransferase complex subunit (non-catalytic) protein-coding common_peak2_173_1164_0.333295902310565_10.3527621906969_7.94264809299353 chr15 64311399 64313800 + 7.94264809299353 NA promoter-TSS (NM_001276463) promoter-TSS (NM_001276463) 74 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_245_1865_0.266456821553307_10.9989616816284_7.94114896068272 chr2 167420828 167422668 + 7.94114896068272 NA promoter-TSS (NM_148929) promoter-TSS (NM_148929) 38 NM_001304542 77031 Mm.278924 NM_148929 ENSMUSG00000039463 Slc9a8 1200006P13Rik|6430709P13Rik|AI182282|NHE-8|NHE8 solute carrier family 9 (sodium/hydrogen exchanger), member 8 protein-coding common_peak1_95_949_-0.424783612753503_9.67939189684156_7.9395183978974 chr5 139303781 139305020 + 7.9395183978974 NA intron (NM_172723, intron 2 of 10) intron (NM_172723, intron 2 of 10) 21064 NM_172723 231821 Mm.297819 NM_172723 ENSMUSG00000056413 Adap1 4930431P11Rik|Centa1|GC1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding common_peak1_33_334_-0.757868713184608_8.00908292875283_7.93502689478206-2 chr4 133707284 133707765 + 7.93502689478206 NA intron (NM_001080819, intron 4 of 19) intron (NM_001080819, intron 4 of 19) 9584 NR_106086 102465707 NR_106086 ENSMUSG00000104566 Mir7227 mmu-mir-7227 microRNA 7227 ncRNA common_peak1_33_334_-0.757868713184608_8.00908292875283_7.93502689478206 chr10 117851839 117852662 + 7.93502689478206 NA Intergenic Intergenic -6276 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding unique_peak2_51_198_0.745408935283639_8.00932908818547_7.93502689478196 chr3 79161189 79162536 + 7.93502689478196 NA Intergenic Intergenic -15987 NM_001099624 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak1_44_437_-0.648608422036542_8.4504828485829_7.93474358805809 chr9 21615442 21616084 + 7.93474358805809 NA promoter-TSS (NM_001174079) promoter-TSS (NM_001174079) -406 NM_011417 20586 Mm.286593 NM_011417 ENSMUSG00000032187 Smarca4 Brg1|HP1-BP72|SNF2beta|SW1/SNF|b2b508.1Clo|b2b692Clo SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding common_peak2_312_2573_0.228646857773512_11.4441197671075_7.9338200259563 chr7 142460061 142463736 + 7.9338200259563 NA intron (NM_001271509, intron 1 of 10) intron (NM_001271509, intron 1 of 10) 1086 NM_001136071 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding common_peak2_59_248_0.675266811715979_8.29763533792607_7.93368010000108 chr5 139830364 139831703 + 7.93368010000108 NA Intergenic ORR1E|LTR|ERVL-MaLR -4190 NM_025604 66506 Mm.29070 NM_025604 ENSMUSG00000029551 Psmg3 1810042K04Rik|4930403H09Rik|AI303239 proteasome (prosome, macropain) assembly chaperone 3 protein-coding common_peak2_192_2027_-0.283036644557082_10.8443236147248_7.93151175342376 chr14 54039324 54043379 + 7.93151175342376 NA Intergenic Intergenic 212578 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_75_742_-0.483629574768992_9.2954036131541_7.93054503610675 chr18 79062871 79064177 + 7.93054503610675 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 45867 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_42_145_0.855902611373933_7.61777586456698_7.9292622649362 chr18 38996264 38996939 + 7.9292622649362 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 3456 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_42_145_0.855902611373933_7.61777586456698_7.9292622649362-2 chr7 55794127 55794833 + 7.9292622649362 NA intron (NM_146190, intron 1 of 22) intron (NM_146190, intron 1 of 22) 332 NM_146190 233276 Mm.284306 NM_146190 ENSMUSG00000033790 Tubgcp5 B130010C12Rik|GCP5|mKIAA1899 tubulin, gamma complex associated protein 5 protein-coding common_peak2_109_611_0.45051548687962_9.48264558613246_7.92909658941568 chr13 66904502 66906066 + 7.92909658941568 NA promoter-TSS (NM_001177750) promoter-TSS (NM_001177750) 66 NM_026219 67530 Mm.379136 NM_026219 ENSMUSG00000021520 Uqcrb 2210415M14Rik|QP-C|QPC|UQBC|UQBP|UQPC ubiquinol-cytochrome c reductase binding protein protein-coding common_peak1_109_611_0.45051548687962_9.48264558613246_7.92909658941568 chr5 35728129 35729649 + 7.92909658941568 NA intron (NM_194344, intron 1 of 17) intron (NM_194344, intron 1 of 17) 387 NM_194344 231147 Mm.290429 NM_194344 ENSMUSG00000036553 Sh3tc1 4631428G15|BC024909 SH3 domain and tetratricopeptide repeats 1 protein-coding common_peak2_112_635_0.442636542888046_9.53420122672838_7.9275349185685 chr7 24369147 24371426 + 7.9275349185685 NA promoter-TSS (NM_001163510) promoter-TSS (NM_001163510) 23 NM_008433 16534 Mm.9911 NM_008433 ENSMUSG00000054342 Kcnn4 IK1|IKCA1|KCA4|KCa3.1|SK4|SKCas|mIKCa1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 protein-coding unique_peak2_35_352_-0.732226700212157_8.0974110231651_7.9267529647415 chr14 55539649 55541092 + 7.9267529647415 NA 5' UTR (NM_028994, exon 1 of 10) 5' UTR (NM_028994, exon 1 of 10) 104 NM_028994 74551 Mm.29856 NM_028994 ENSMUSG00000040618 Pck2 1810010O14Rik|9130022B02Rik|PEPCK-M phosphoenolpyruvate carboxykinase 2 (mitochondrial) protein-coding unique_peak2_35_352_-0.732226700212157_8.0974110231651_7.9267529647415-2 chrX 75095096 75096846 + 7.9267529647415 NA 5' UTR (NM_001030307, exon 1 of 15) 5' UTR (NM_001030307, exon 1 of 15) 117 NM_001030307 245474 Mm.291062 NM_001030307 ENSMUSG00000031403 Dkc1 BC068171 dyskeratosis congenita 1, dyskerin protein-coding common_peak1_35_352_-0.732226700212157_8.0974110231651_7.9267529647415 chr11 96318639 96319489 + 7.9267529647415 NA exon (NM_010459, exon 1 of 2) exon (NM_010459, exon 1 of 2) 797 NM_010459 15412 Mm.3546 NM_010459 ENSMUSG00000038692 Hoxb4 Hox-2.6 homeobox B4 protein-coding unique_peak1_17_28_1.6467043667451_5.68133317850012_7.92670265276822 chr9 77463181 77463626 + 7.92670265276822 NA intron (NM_172528, intron 4 of 13) intron (NM_172528, intron 4 of 13) -63987 NR_040378 70487 Mm.58958 NR_040378 ENSMUSG00000099170 5730403I07Rik - RIKEN cDNA 5730403I07 gene ncRNA common_peak1_128_1302_-0.357759682160902_10.1687415274877_7.92606444166469 chr4 115827405 115828698 + 7.92606444166469 NA promoter-TSS (NM_175308) promoter-TSS (NM_175308) -41 NM_175308 100465 Mm.35571 NM_175308 ENSMUSG00000028709 Mob3c AW822253|D130076I06Rik|Mobkl2c MOB kinase activator 3C protein-coding common_peak1_65_642_-0.524742668480711_9.06630359308759_7.92428507988008 chr3 60525822 60527128 + 7.92428507988008 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 25296 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_43_151_0.838482540436722_7.66716878366195_7.92300370045576 chr19 31909814 31910562 + 7.92300370045576 NA intron (NM_001081074, intron 3 of 11) intron (NM_001081074, intron 3 of 11) 41427 NM_001081074 69865 Mm.87538 NM_001081074 ENSMUSG00000052595 A1cf 1810073H04Rik|ACF64|ACF65|ASP|Acf|MCM|MerCreMer|Tg(Myh6-cre/Esr1*)1Jmk|mer APOBEC1 complementation factor protein-coding common_peak2_70_321_0.6022426677324_8.63203821198082_7.92260870519698 chr7 122387154 122389142 + 7.92260870519698 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 99023 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding unique_peak2_22_234_-0.938056142471489_7.40748887532926_7.92102463667178 chr19 41916393 41917805 + 7.92102463667178 NA intron (NM_023418, intron 3 of 3) intron (NM_023418, intron 3 of 3) 5228 NM_023418 18648 Mm.16783 NM_023418 ENSMUSG00000011752 Pgam1 2310050F24Rik|Pgam-1 phosphoglycerate mutase 1 protein-coding unique_peak2_9_118_-1.43029584686352_6.17966983987618_7.9204515648378 chr4 108406140 108407033 + 7.9204515648378 NA exon (NM_024198, exon 1 of 3) exon (NM_024198, exon 1 of 3) 127 NM_024198 67305 Mm.20164 NM_024198 ENSMUSG00000028597 Gpx7 3110050F08Rik|AI327032|GPX6 glutathione peroxidase 7 protein-coding common_peak1_42_418_-0.665079263445401_8.37826680197665_7.91766599838055 chr13 24830891 24831554 + 7.91766599838055 NA promoter-TSS (NM_019551) promoter-TSS (NM_019551) 267 NM_025790 66834 Mm.2125 NM_025790 ENSMUSG00000006717 Acot13 0610006O17Rik|Them2 acyl-CoA thioesterase 13 protein-coding common_peak1_87_865_-0.445200849660061_9.53562278989669_7.91729293960664 chrX 155215323 155216612 + 7.91729293960664 NA intron (NM_001291865, intron 1 of 6) intron (NM_001291865, intron 1 of 6) 482 NM_009121 20229 Mm.2734 NM_009121 ENSMUSG00000025283 Sat1 AA617398|SSAT|Sat spermidine/spermine N1-acetyl transferase 1 protein-coding common_peak1_70_692_-0.503551996290197_9.18493554399211_7.91577526879113 chr15 102406305 102407136 + 7.91577526879113 NA intron (NM_013672, intron 1 of 5) CpG-5406 404 NM_013672 20683 Mm.4618 NM_013672 ENSMUSG00000001280 Sp1 1110003E12Rik|AA450830|AI845540|Sp1-1 trans-acting transcription factor 1 protein-coding common_peak2_370_3222_0.205089401649037_11.7567331738841_7.91555166235884 chr14 66195449 66201205 + 7.91555166235884 NA intron (NM_172498, intron 2 of 29) MTC|LTR|ERVL-MaLR 15225 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_43_428_-0.658423783619238_8.41562194568993_7.9140739854108 chr14 79537711 79538453 + 7.9140739854108 NA intron (NM_001286411, intron 2 of 8) PB1D10|SINE|Alu 22408 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak1_83_413_0.537212308671887_8.96209311183527_7.91388823940129 chr3 69200808 69201895 + 7.91388823940129 NA Intergenic ORR1A2-int|LTR|ERVL-MaLR -21068 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding common_peak1_54_216_0.719739785941436_8.1214211254152_7.91318252446477 chr11 96504431 96505427 + 7.91318252446477 NA intron (NM_001033186, intron 2 of 12) intron (NM_001033186, intron 2 of 12) 40338 NM_001177898 78473 Mm.395840 NM_001033186 ENSMUSG00000057058 Skap1 1700091G21Rik|Scap1|Skap-55 src family associated phosphoprotein 1 protein-coding common_peak2_83_824_-0.457551042961967_9.45947478765219_7.91017223795306 chr2 45170886 45173856 + 7.91017223795306 NA Intergenic Intergenic -59092 NM_015753 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak1_83_824_-0.457551042961967_9.45947478765219_7.91017223795306 chr19 46328091 46329358 + 7.91017223795306 NA exon (NM_133694, exon 2 of 4) exon (NM_133694, exon 2 of 4) 540 NM_133694 68431 Mm.19973 NM_133694 ENSMUSG00000025226 Fbxl15 0710008C12Rik|Fbxo37 F-box and leucine-rich repeat protein 15 protein-coding common_peak2_83_824_-0.457551042961967_9.45947478765219_7.91017223795306-2 chr2 181692553 181694721 + 7.91017223795306 NA 5' UTR (NM_001291208, exon 1 of 5) 5' UTR (NM_001291208, exon 1 of 5) 173 NM_001291206 56470 Mm.274366 NM_026446 ENSMUSG00000002458 Rgs19 2610042F04Rik|AI324841|AW547781|GAIP regulator of G-protein signaling 19 protein-coding common_peak1_50_495_-0.606525533259418_8.65093354375717_7.90943553499636 chr9 56075440 56076224 + 7.90943553499636 NA Intergenic Intergenic -14144 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak1_37_118_0.932158751275303_7.3608971389456_7.90873714441958-3 chr9 65826971 65827654 + 7.90873714441958 NA intron (NM_172536, intron 1 of 9) C-rich|Low_complexity|Low_complexity 252 NM_172536 214812 Mm.139231 NM_172536 ENSMUSG00000040524 Zfp609 9830165N24|BC016271|Znf609|mKIAA0295 zinc finger protein 609 protein-coding common_peak1_37_118_0.932158751275303_7.3608971389456_7.90873714441958 chr2 35449533 35450451 + 7.90873714441958 NA intron (NM_001308299, intron 1 of 7) intron (NM_001308299, intron 1 of 7) 11457 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak1_37_118_0.932158751275303_7.3608971389456_7.90873714441958-2 chr2 151972959 151973731 + 7.90873714441958 NA promoter-TSS (NM_001289151) promoter-TSS (NM_001289151) 49 NM_001289151 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding common_peak2_37_118_0.932158751275303_7.3608971389456_7.90873714441958 chr15 78605498 78606420 + 7.90873714441958 NA intron (NM_028195, intron 4 of 12) intron (NM_028195, intron 4 of 12) 8912 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak2_188_1979_-0.285541038861906_10.808514195536_7.90869912580541 chr18 37932231 37935558 + 7.90869912580541 NA intron (NM_001305981, intron 1 of 28) intron (NM_001305981, intron 1 of 28) 1529 NM_001305980 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding common_peak2_104_1043_-0.402325765893066_9.82674311362335_7.90814958031843 chr8 4212645 4215192 + 7.90814958031843 NA exon (NM_207203, exon 6 of 7) exon (NM_207203, exon 6 of 7) 3394 NM_207203 73072 Mm.477379 NM_207203 ENSMUSG00000064125 Prr36 - proline rich 36 protein-coding common_peak1_37_371_-0.712182296524785_8.18306766284564_7.90524942767586 chr17 83655003 83655593 + 7.90524942767586 NA Intergenic Intergenic -23403 NM_153512 225030 Mm.223506 NM_153512 ENSMUSG00000045053 Kcng3 KV6.3|Kv10.1a|Kv10.1b potassium voltage-gated channel, subfamily G, member 3 protein-coding unique_peak1_19_35_1.52120922618846_5.93052961453654_7.90447117081514-2 chr2 173351919 173352246 + 7.90447117081514 NA Intergenic Intergenic -75549 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding unique_peak1_19_35_1.52120922618846_5.93052961453654_7.90447117081514 chr14 77836952 77837426 + 7.90447117081514 NA intron (NM_025384, intron 5 of 5) intron (NM_025384, intron 5 of 5) 37728 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding unique_peak1_19_35_1.52120922618846_5.93052961453654_7.90447117081514-3 chr3 101299917 101300486 + 7.90447117081514 NA Intergenic Intergenic -12262 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding common_peak1_19_206_-1.00235272986855_7.19231059256505_7.90101005423861 chr3 103852799 103853239 + 7.90101005423861 NA intron (NM_001142960, intron 3 of 3) intron (NM_001142960, intron 3 of 3) -6776 NR_104070 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding common_peak1_107_1075_-0.396030173344316_9.87344727588447_7.90100102775158 chr2 91964775 91966055 + 7.90100102775158 NA Intergenic Intergenic -1852 NM_138306 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak1_36_113_0.946893637046669_7.30633683268808_7.900942688677-2 chr3 65659036 65659551 + 7.900942688677 NA promoter-TSS (NR_106200) promoter-TSS (NR_106200) 5 NR_106200 102465905 NR_106200 ENSMUSG00000098944 Mir8120 Gm27637|mmu-mir-8120 microRNA 8120 ncRNA common_peak1_36_113_0.946893637046669_7.30633683268808_7.900942688677 chr12 79028683 79029523 + 7.900942688677 NA promoter-TSS (NM_181073) promoter-TSS (NM_181073) -60 NM_181073 211945 Mm.478321 NM_181073 ENSMUSG00000060716 Plekhh1 AV308913|C77772|D630024D12Rik|mKIAA1200 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 protein-coding common_peak1_36_113_0.946893637046669_7.30633683268808_7.900942688677-3 chrX 140598925 140599545 + 7.900942688677 NA intron (NM_001077364, intron 1 of 3) CpG 1287 NM_001077364 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding common_peak1_67_662_-0.516104176765705_9.11481297172974_7.90090937959396 chr3 106461338 106462179 + 7.90090937959396 NA Intergenic B1_Mm|SINE|Alu -20673 NM_001093754 72121 Mm.14816 NM_028110 ENSMUSG00000027901 Dennd2d 2010308M01Rik|AI451421 DENN/MADD domain containing 2D protein-coding common_peak2_274_2166_0.247913167170562_11.205440021679_7.9006444986618 chr18 36285909 36288320 + 7.9006444986618 NA 5' UTR (NM_008989, exon 2 of 2) 5' UTR (NM_008989, exon 2 of 2) 5952 NM_008989 19290 Mm.231802 NM_008989 ENSMUSG00000043991 Pura CAGER-1|Pur-alpha|ssCRE-BP purine rich element binding protein A protein-coding common_peak2_238_1794_0.271336385382165_10.9454363214015_7.90053926091002 chr18 34330260 34332181 + 7.90053926091002 NA promoter-TSS (NM_025527) promoter-TSS (NM_025527) 75 NM_025527 66384 Mm.29452 NM_025527 ENSMUSG00000014504 Srp19 2310020D23Rik signal recognition particle 19 protein-coding common_peak1_234_1754_0.273981359112414_10.9142459947481_7.89940154957682 chr11 52360002 52361675 + 7.89940154957682 NA promoter-TSS (NM_011694) promoter-TSS (NM_011694) -24 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding common_peak1_58_573_-0.559380521633862_8.88521666585876_7.89859644679986 chr4 62593966 62594934 + 7.89859644679986 NA intron (NM_019492, intron 3 of 19) intron (NM_019492, intron 3 of 19) -25222 NM_001081650 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_39_390_-0.693278258490221_8.26438566806224_7.89730908843169 chr10 117893850 117894569 + 7.89730908843169 NA Intergenic ID_B1|SINE|B4 -31250 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_49_186_0.765733043435104_7.92976098160519_7.89638922134775 chr6 83441177 83442247 + 7.89638922134775 NA promoter-TSS (NM_183138) promoter-TSS (NM_183138) -34 NM_183138 194388 Mm.211030 NM_183138 ENSMUSG00000034832 Tet3 B430006D22Rik|BC037432|D230004J03Rik tet methylcytosine dioxygenase 3 protein-coding unique_peak2_25_261_-0.878001756896518_7.59442212308919_7.895302512023 chr7 16192609 16194548 + 7.895302512023 NA Intergenic Intergenic 18183 NR_102730 17537 Mm.360516 NM_008627 ENSMUSG00000041420 Meis3 AI573393|Mrg2 Meis homeobox 3 protein-coding common_peak2_64_632_-0.529147169095445_9.04148810488062_7.89474995162935 chr17 56078105 56080408 + 7.89474995162935 NA promoter-TSS (NM_001304785) promoter-TSS (NM_001304785) -375 NM_001304784 15193 Mm.12966 NM_008233 ENSMUSG00000002833 Hdgfrp2 HRP-2 hepatoma-derived growth factor, related protein 2 protein-coding common_peak1_206_2190_-0.270643932590144_10.9620518026952_7.89413166553697 chr13 55599420 55601506 + 7.89413166553697 NA intron (NM_146045, intron 1 of 5) URR1A|DNA|hAT-Charlie 567 NM_001311137 218271 Mm.139825 NM_146045 ENSMUSG00000021504 B4galt7 - xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) protein-coding common_peak1_123_726_0.414095273187424_9.71285919051331_7.89195343279523 chr15 52712212 52713229 + 7.89195343279523 NA intron (NM_027212, intron 1 of 3) CpG 275 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak2_97_969_-0.41835238897745_9.71266474258577_7.89195343279523 chr7 36655375 36657369 + 7.89195343279523 NA Intergenic Intergenic -41746 NM_172298 243931 Mm.44141 NM_172298 ENSMUSG00000021217 Tshz3 A630038G13Rik|Tsh3|Zfp537|mKIAA1474|teashirt3 teashirt zinc finger family member 3 protein-coding unique_peak1_25_60_1.22468390707805_6.54307929110191_7.89055179959236 chr7 122401557 122402158 + 7.89055179959236 NA intron (NM_001316672, intron 2 of 16) PB1D10|SINE|Alu 112732 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak2_532_5175_0.162826278147753_12.4190350410664_7.89028795857865 chr1 13371623 13375180 + 7.89028795857865 NA promoter-TSS (NM_001302702) promoter-TSS (NM_001302702) 682 NM_008678 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding common_peak1_389_4493_-0.186123061507372_12.0407228784262_7.88954801583814 chr7 28380351 28383163 + 7.88954801583814 NA Intergenic Intergenic -2529 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding common_peak2_78_772_-0.472225512811532_9.35821184751908_7.88709413115909 chr17 78417271 78418488 + 7.88709413115909 NA exon (NM_199448, exon 1 of 8) exon (NM_199448, exon 1 of 8) 273 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_105_580_0.459959723224939_9.412374215017_7.88538389818028 chr3 83055440 83056384 + 7.88538389818028 NA intron (NM_016784, intron 1 of 14) intron (NM_016784, intron 1 of 14) 374 NM_016784 53317 Mm.286349 NM_016784 ENSMUSG00000027998 Plrg1 AA958940|C80566|Tango4 pleiotropic regulator 1 protein-coding common_peak1_335_2828_0.217847427147671_11.5750001749701_7.88405175192535 chr15 78893778 78897273 + 7.88405175192535 NA TTS (NM_145929) TTS (NM_145929) 3685 NR_105920 102466210 NR_105920 ENSMUSG00000099267 Mir6955 Gm27769|mmu-mir-6955 microRNA 6955 ncRNA common_peak2_76_363_0.56892690057437_8.79225809048588_7.88381273965528 chr8 124699741 124701681 + 7.88381273965528 NA intron (NM_145607, intron 4 of 17) PB1D10|SINE|Alu 21264 NM_145607 234875 Mm.38436 NM_145607 ENSMUSG00000037300 Ttc13 BC017545 tetratricopeptide repeat domain 13 protein-coding common_peak2_71_701_-0.497417236059182_9.20661860227497_7.88115256836287 chr10 76237185 76238562 + 7.88115256836287 NA promoter-TSS (NR_126571) promoter-TSS (NR_126571) -8 NM_133182 15468 Mm.32020 NM_133182 ENSMUSG00000020230 Prmt2 AI504737|Hrmt1l1 protein arginine N-methyltransferase 2 protein-coding common_peak2_48_180_0.777030349827479_7.88836106199695_7.88082466426288-2 chr3 79103268 79104496 + 7.88082466426288 NA intron (NM_001310536, intron 3 of 23) intron (NM_001310536, intron 3 of 23) 41005 NM_001310536 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak2_48_180_0.777030349827479_7.88836106199695_7.88082466426288 chr19 32769226 32770564 + 7.88082466426288 NA intron (NM_008960, intron 1 of 8) intron (NM_008960, intron 1 of 8) 12318 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1 phosphatase and tensin homolog protein-coding common_peak2_95_948_-0.423264186556302_9.67863218374296_7.88064252074609-2 chr18 34623485 34625038 + 7.88064252074609 NA promoter-TSS (NM_001166406) promoter-TSS (NM_001166406) -363 NM_001166407 19348 Mm.258846 NM_009004 ENSMUSG00000003779 Kif20a AA415432|Rab6kifl kinesin family member 20A protein-coding common_peak2_95_948_-0.423264186556302_9.67863218374296_7.88064252074609 chr13 46778947 46781580 + 7.88064252074609 NA intron (NM_010617, intron 25 of 37) intron (NM_010617, intron 25 of 37) -52414 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak1_453_4200_0.180039987687568_12.1265370643303_7.87983164058289 chr18 84085648 84089155 + 7.87983164058289 NA promoter-TSS (NM_001081300) promoter-TSS (NM_001081300) -757 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding common_peak1_168_1748_-0.304500725392243_10.6200642112255_7.87971334266393 chr1 171627322 171629369 + 7.87971334266393 NA Intergenic RLTR18B|LTR|ERVK 13555 NR_106151 102465784 NR_106151 ENSMUSG00000098316 Mir7683 Gm27950|mmu-mir-7683 microRNA 7683 ncRNA common_peak1_176_1840_-0.296612990154797_10.6979674162725_7.8764042722726 chr10 26229815 26232641 + 7.8764042722726 NA intron (NM_001115154, intron 3 of 10) intron (NM_001115154, intron 3 of 10) 1521 NM_001115154 268288 Mm.213322 NM_001013766 ENSMUSG00000051354 Samd3 Gm623 sterile alpha motif domain containing 3 protein-coding common_peak2_315_3531_-0.210945914162437_11.6807966705672_7.87607746703093 chr4 40720271 40724015 + 7.87607746703093 NA promoter-TSS (NR_029594) promoter-TSS (NR_029594) 174 NR_077221 622208 Mm.471544 NR_077221 Gm6297 - predicted gene 6297 ncRNA common_peak1_26_64_1.19983975381114_6.62228768993402_7.87583586803844 chr6 129223986 129224519 + 7.87583586803844 NA Intergenic Intergenic 13793 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak1_333_2806_0.21854556836179_11.5640861326934_7.87553734214985 chr6 128824303 128828127 + 7.87553734214985 NA promoter-TSS (NM_030599) promoter-TSS (NM_030599) 100 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak2_95_503_0.489720166964892_9.22214000698236_7.87304032599728 chr17 6079173 6080506 + 7.87304032599728 NA promoter-TSS (NM_001111017) promoter-TSS (NM_001111017) 11 NM_181392 66467 Mm.303441 NM_181392 ENSMUSG00000034345 Gtf2h5 2700017P07Rik|2810432H05Rik|D17Wsu155e general transcription factor IIH, polypeptide 5 protein-coding common_peak2_93_927_-0.428237596515197_9.64386219686997_7.87121695632576 chr6 89643391 89645070 + 7.87121695632576 NA exon (NM_001178058, exon 1 of 16) exon (NM_001178058, exon 1 of 16) 242 NM_001178058 232223 Mm.229332 NM_153162 ENSMUSG00000000811 Txnrd3 AI196535|TR2|Tgr thioredoxin reductase 3 protein-coding common_peak2_215_1566_0.288255035926083_10.7579169824356_7.87039917048981 chr8 70351000 70354110 + 7.87039917048981 NA intron (NM_001122829, intron 1 of 23) intron (NM_001122829, intron 1 of 23) 718 NM_030680 19704 Mm.258280 NM_030680 ENSMUSG00000058301 Upf1 B430202H16Rik|NORF1|PNORF-1|Rent1|Upflp UPF1 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak2_47_174_0.789176667446123_7.84579944555539_7.86806441099615 chr5 92309257 92310468 + 7.86806441099615 NA exon (NM_172713, exon 1 of 22) exon (NM_172713, exon 1 of 22) 162 NM_172713 231452 Mm.86564 NM_172713 ENSMUSG00000029415 Sdad1 4931421J16|AA591032|AW538460 SDA1 domain containing 1 protein-coding common_peak2_145_914_0.371303404400582_10.0232796353717_7.8672942923927 chr6 127239228 127241581 + 7.8672942923927 NA Intergenic Intergenic 67563 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak2_112_1127_-0.384031854226393_9.9475354252856_7.86699953380453 chr7 141268083 141270963 + 7.86699953380453 NA exon (NM_028069, exon 14 of 14) exon (NM_028069, exon 14 of 14) -3099 NM_001252600 54123 Mm.3233 NM_016850 ENSMUSG00000025498 Irf7 - interferon regulatory factor 7 protein-coding common_peak1_277_2199_0.245309283566936_11.2259424501955_7.86678049656721 chr18 21000989 21003139 + 7.86678049656721 NA exon (NM_019706, exon 2 of 7) exon (NM_019706, exon 2 of 7) 107 NM_207623 56515 Mm.253542 NM_019706 ENSMUSG00000024317 Rnf138 2410015A17Rik|2810480D20Rik|STRIN|Trif|Trif-d ring finger protein 138 protein-coding common_peak2_485_4591_0.172181983656831_12.2509979185041_7.86374044095714 chr2 150302541 150312943 + 7.86374044095714 NA Intergenic Intergenic 50225 NM_001142410 100216455 Mm.484816 NM_001142410 ENSMUSG00000079008 Gm14124 EG640962|ENSMUSG00000074735|Gm10749|OTTMUSG00000015734 predicted gene 14124 protein-coding common_peak1_16_180_-1.09630962610903_6.95169107402869_7.86348185767487 chr5 105494956 105495317 + 7.86348185767487 NA Intergenic Intergenic -24335 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak1_16_180_-1.09630962610903_6.95169107402869_7.86348185767487-2 chr5 142925905 142926338 + 7.86348185767487 NA Intergenic Intergenic -19367 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_93_488_0.496052743660142_9.18171702678231_7.85995848248703-2 chr15 25842539 25844032 + 7.85995848248703 NA promoter-TSS (NM_001034851) promoter-TSS (NM_001034851) -13 NM_001034851 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Fam134b 1810015C04Rik|AU015349 family with sequence similarity 134, member B protein-coding common_peak1_93_488_0.496052743660142_9.18171702678231_7.85995848248703 chr1 57969334 57970393 + 7.85995848248703 NA promoter-TSS (NR_027630) promoter-TSS (NR_027630) 221 NM_001159864 51960 Mm.339711 NM_030211 ENSMUSG00000054770 Kctd18 4932411A20Rik|6530404F10Rik potassium channel tetramerisation domain containing 18 protein-coding common_peak2_118_685_0.425007604066831_9.63456856820623_7.85902516171164 chr8 25652469 25654216 + 7.85902516171164 NA intron (NM_001081269, intron 3 of 22) intron (NM_001081269, intron 3 of 22) 12765 NM_001081269 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Whsc1l1 6720429E03|A530023P05|AI528490|NSD3|WHISTLE Wolf-Hirschhorn syndrome candidate 1-like 1 (human) protein-coding common_peak1_98_526_0.47979531217695_9.28155680772569_7.85782601103768 chr13 91461046 91462419 + 7.85782601103768 NA intron (NM_024186, intron 1 of 15) CpG 635 NM_024186 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding common_peak2_31_315_-0.780915173865578_7.91332316124431_7.85712944339786 chr3 55111909 55112875 + 7.85712944339786 NA 5' UTR (NM_001144987, exon 1 of 9) 5' UTR (NM_001144987, exon 1 of 9) 226 NM_001144987 229285 Mm.235523 NM_144895 ENSMUSG00000036580 Spg20 AI840044|C79168|SPARTIN|TAHCCP1|mKIAA0610 spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) protein-coding common_peak2_96_958_-0.420048641654722_9.69536268419077_7.85685599434376 chr11 29547237 29548715 + 7.85685599434376 NA promoter-TSS (NM_028504) promoter-TSS (NM_028504) 26 NM_001163521 73324 Mm.69388 NM_028504 ENSMUSG00000020461 Clhc1 1700034F02Rik clathrin heavy chain linker domain containing 1 protein-coding common_peak2_96_958_-0.420048641654722_9.69536268419077_7.85685599434376-2 chr9 22467406 22469114 + 7.85685599434376 NA promoter-TSS (NM_018739) promoter-TSS (NM_018739) 96 NM_018739 55934 Mm.38235 NM_018739 ENSMUSG00000032239 Rp9 PAP-1|Rp9h retinitis pigmentosa 9 (human) protein-coding common_peak2_287_2305_0.23995780896632_11.2911557021349_7.85565597855831 chr12 102328276 102333480 + 7.85565597855831 NA intron (NM_001161365, intron 3 of 9) intron (NM_001161365, intron 3 of 9) 47237 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_62_611_-0.535778682740869_8.98949850132222_7.8524171508156 chr13 55443203 55444109 + 7.8524171508156 NA Intergenic RSINE1|SINE|B4 -1416 NM_001286063 26385 Mm.10193 NM_011938 ENSMUSG00000074886 Grk6 Gprk6 G protein-coupled receptor kinase 6 protein-coding common_peak1_203_1449_0.299058214597872_10.6513662922012_7.85226598743299 chr3 90247480 90249227 + 7.85226598743299 NA intron (NM_013901, intron 1 of 3) CpG 161 NM_013901 30791 Mm.294709 NM_013901 ENSMUSG00000052310 Slc39a1 Zip1|Zirtl solute carrier family 39 (zinc transporter), member 1 protein-coding unique_peak2_7_101_-1.60278439003268_5.87103314695515_7.85176259495921 chr11 104629665 104630345 + 7.85176259495921 NA intron (NM_016780, intron 2 of 14) MIR|SINE|MIR 22005 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_27_278_-0.837556561811262_7.70534303092356_7.84939611392343 chr1 80665430 80666119 + 7.84939611392343 NA promoter-TSS (NM_001285927) promoter-TSS (NM_001285927) -422 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak2_75_356_0.573808561740504_8.76668454489935_7.84777533147747 chr5 148768921 148770407 + 7.84777533147747 NA Intergenic Intergenic -8299 NR_131106 78015 Mm.243839 NR_131106 ENSMUSG00000085740 4930505K14Rik - RIKEN cDNA 4930505K14 gene ncRNA common_peak1_75_356_0.573808561740504_8.76668454489935_7.84777533147747 chr7 81344394 81345313 + 7.84777533147747 NA intron (NM_009092, intron 2 of 4) CpG 381 NM_009092 20068 Mm.42767 NM_009092 ENSMUSG00000061787 Rps17 - ribosomal protein S17 protein-coding unique_peak2_4_74_-1.99090908523782_5.23336414787697_7.84737105509427 chr18 55548377 55548893 + 7.84737105509427 NA Intergenic Intergenic -558455 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding common_peak2_107_1074_-0.394688755264516_9.87277656684456_7.84580051105285 chr7 44986652 44988033 + 7.84580051105285 NA promoter-TSS (NM_001252477) promoter-TSS (NM_001252477) 442 NR_045266 100502630 Mm.490013 NR_045266 ENSMUSG00000087138 Gm15545 OTTMUSG00000023473 predicted gene 15545 ncRNA common_peak1_32_324_-0.766975960254936_7.96080792778835_7.84471125765925 chr7 67530960 67531457 + 7.84471125765925 NA intron (NM_175124, intron 8 of 9) intron (NM_175124, intron 8 of 9) 114028 NM_175124 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak2_110_1106_-0.388521339416856_9.91817883707312_7.84348346865495 chr14 60265051 60266295 + 7.84348346865495 NA intron (NM_144843, intron 1 of 13) intron (NM_144843, intron 1 of 13) 468 NM_144843 219135 Mm.247007 NM_144843 ENSMUSG00000021987 Mtmr6 4022440C11Rik|AI428804|AU041072 myotubularin related protein 6 protein-coding common_peak2_89_458_0.51044060533718_9.0975706460824_7.84209808625891 chr4 62673343 62676717 + 7.84209808625891 NA intron (NM_001310706, intron 1 of 6) intron (NM_001310706, intron 1 of 6) 1056 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_303_3377_-0.21514016465907_11.6143835304719_7.84056722825951 chr11 30189043 30193593 + 7.84056722825951 NA intron (NM_175836, intron 1 of 34) intron (NM_175836, intron 1 of 34) 6939 NM_009260 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak2_208_1498_0.293960948576883_10.6967651422363_7.83875790964197 chr17 29093644 29096240 + 7.83875790964197 NA intron (NM_007669, intron 1 of 2) CpG 1173 NM_007669 12575 Mm.195663 NM_007669 ENSMUSG00000023067 Cdkn1a CAP20|CDKI|CIP1|Cdkn1|P21|SDI1|Waf1|mda6|p21Cip1|p21WAF cyclin-dependent kinase inhibitor 1A (P21) protein-coding unique_peak2_18_197_-1.02899241668272_7.11486041173825_7.83643835735978 chrX 153886934 153888228 + 7.83643835735978 NA Intergenic Intergenic 55288 NM_001005370 278240 Mm.293363 NM_001005370 ENSMUSG00000046550 Spin2c BC068162|SPIN-2C|Spin2 spindlin family, member 2C protein-coding common_peak1_275_3026_-0.227853017208009_11.4497464512235_7.83526615498544 chr4 127021266 127022730 + 7.83526615498544 NA exon (NM_023603, exon 1 of 10) exon (NM_023603, exon 1 of 10) 697 NM_023603 71514 Mm.257276 NM_023603 ENSMUSG00000028820 Sfpq 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|OTTMUSG00000009329|PSF|REP1 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) protein-coding common_peak1_102_1021_-0.405631597160882_9.79436368235718_7.83419156611161 chr9 35210248 35210976 + 7.83419156611161 NA promoter-TSS (NM_026130) promoter-TSS (NM_026130) 443 NM_172291 235169 Mm.138512 NM_172291 ENSMUSG00000039048 Foxred1 BC024806|TEG-23|Tex23 FAD-dependent oxidoreductase domain containing 1 protein-coding common_peak2_81_399_0.544199386477057_8.91595588301325_7.83195753442646 chr14 54426143 54427649 + 7.83195753442646 NA promoter-TSS (NM_026851) promoter-TSS (NM_026851) -13 NM_026851 68836 Mm.248163 NM_026851 ENSMUSG00000010406 Mrpl52 1110047B07Rik mitochondrial ribosomal protein L52 protein-coding common_peak2_81_399_0.544199386477057_8.91595588301325_7.83195753442646-2 chr19 29812367 29813599 + 7.83195753442646 NA promoter-TSS (NM_177721) promoter-TSS (NM_177721) -9 NM_177721 240614 Mm.125503 NM_177721 ENSMUSG00000074909 Ranbp6 C630001B19 RAN binding protein 6 protein-coding common_peak2_34_342_-0.740619051649279_8.05175524034817_7.83183990710293 chr16 10542113 10543178 + 7.83183990710293 NA exon (NM_021428, exon 1 of 2) exon (NM_021428, exon 1 of 2) 409 NM_021428 58239 Mm.353006 NM_021428 ENSMUSG00000038055 Dexi 1810029J14Rik|AI836170|AW413143|D16Bwg0586e|Myle dexamethasone-induced transcript protein-coding common_peak1_67_661_-0.513926523460334_9.11372414507705_7.83069506181162 chr10 43220642 43221478 + 7.83069506181162 NA promoter-TSS (NM_001168289) promoter-TSS (NM_001168289) -426 NM_027772 71365 Mm.490430 NM_027772 ENSMUSG00000038240 Pdss2 5430420P03Rik|Gm60|Plmp|kd|mDLP1 prenyl (solanesyl) diphosphate synthase, subunit 2 protein-coding common_peak2_35_351_-0.728133945578273_8.09536464584816_7.83069164957683-2 chr11 114965641 114966797 + 7.83069164957683 NA Intergenic PB1D10|SINE|Alu -5802 NM_199225 387565 Mm.351450 NM_199225 ENSMUSG00000058728 Cd300c Clm6 CD300C molecule protein-coding common_peak2_35_351_-0.728133945578273_8.09536464584816_7.83069164957683 chr10 40246347 40247593 + 7.83069164957683 NA promoter-TSS (NM_001042556) promoter-TSS (NM_001042556) 9 NM_001042556 67239 Mm.11480 NM_023323 ENSMUSG00000038510 Rpf2 2810470K21Rik|AU040229|AU043242|Bxdc1 ribosome production factor 2 homolog protein-coding common_peak1_114_1148_-0.379596691674283_9.97636473680897_7.8306855081641 chr7 126583117 126584557 + 7.8306855081641 NA promoter-TSS (NM_009907) promoter-TSS (NM_009907) 443 NM_001146311 12752 Mm.268930 NM_009907 ENSMUSG00000030720 Cln3 AI323623 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) protein-coding common_peak1_224_2403_-0.256936956268234_11.1027527025771_7.8301851398081 chr11 73131169 73133972 + 7.8301851398081 NA intron (NM_172944, intron 23 of 25) MER20|DNA|hAT-Charlie 5724 NM_010353 14841 Mm.42045 NM_010353 ENSMUSG00000050107 Gsg2 Haspin germ cell associated 2, haspin protein-coding common_peak1_42_417_-0.661631961826933_8.37654315116742_7.82944544792093 chr13 67305851 67306624 + 7.82944544792093 NA intron (NM_001003666, intron 1 of 3) intron (NM_001003666, intron 1 of 3) 175 NM_001003666 431706 Mm.439456 NM_001003666 ENSMUSG00000055341 Zfp457 Rslcan-6 zinc finger protein 457 protein-coding common_peak2_42_417_-0.661631961826933_8.37654315116742_7.82944544792093 chr7 66078901 66080399 + 7.82944544792093 NA promoter-TSS (NM_024439) promoter-TSS (NM_024439) 1 NM_024439 109815 Mm.482127 NM_024439 ENSMUSG00000075701 Selenos 1500011E07Rik|C78786|H-4|H-47|H4|H47|Sels|Vimp selenoprotein S protein-coding common_peak1_108_1084_-0.391737091802206_9.88761078143074_7.82897705472583 chr13 98802661 98804782 + 7.82897705472583 NA intron (NM_172591, intron 2 of 25) B2_Mm1a|SINE|B2 11728 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak2_545_5342_0.159657568236913_12.4632630859412_7.82873062035659 chr13 37540133 37545896 + 7.82873062035659 NA Intergenic Intergenic 197669 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding common_peak1_15_171_-1.13001149157693_6.86125900891363_7.82840183265317 chr19 21767636 21767981 + 7.82840183265317 NA Intergenic Intergenic -10532 NM_001033759 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_111_1116_-0.385624098092677_9.93260142143698_7.82808426251646 chr8 122429653 122431102 + 7.82808426251646 NA intron (NM_001301284, intron 1 of 4) intron (NM_001301284, intron 1 of 4) 2563 NM_001301284 13057 Mm.271671 NM_007806 ENSMUSG00000006519 Cyba b558|nmf333|p22-phox|p22phox cytochrome b-245, alpha polypeptide protein-coding common_peak1_145_1488_-0.331196701010114_10.374529688077_7.82775111321114 chr6 120187245 120189407 + 7.82775111321114 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) 94946 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak1_74_731_-0.485550129994376_9.27292477328685_7.82751962772568 chr8 123949373 123950251 + 7.82751962772568 NA promoter-TSS (NM_172288) promoter-TSS (NM_172288) -547 NM_172288 234865 Mm.267812 NM_172288 ENSMUSG00000039509 Nup133 mermaid nucleoporin 133 protein-coding common_peak1_230_2475_-0.252939542287914_11.1473258280703_7.82746530637838 chr10 68509678 68512751 + 7.82746530637838 NA intron (NM_028491, intron 4 of 7) intron (NM_028491, intron 4 of 7) 30661 NM_028491 73287 Mm.141830 NM_028491 ENSMUSG00000019945 1700040L02Rik - RIKEN cDNA 1700040L02 gene protein-coding common_peak1_195_1373_0.305934570465297_10.5771335740507_7.82741370368286 chr3 69315850 69317552 + 7.82741370368286 NA promoter-TSS (NM_178726) promoter-TSS (NM_178726) -217 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding common_peak2_79_385_0.551901812735409_8.86840794363578_7.82736517796419 chr11 5004707 5006519 + 7.82736517796419 NA intron (NM_001243044, intron 1 of 21) intron (NM_001243044, intron 1 of 21) 18789 NM_007454 11764 Mm.274816 NM_007454 ENSMUSG00000009090 Ap1b1 Adtb1|b2b1660Clo adaptor protein complex AP-1, beta 1 subunit protein-coding common_peak2_69_680_-0.503452962302182_9.15978450686098_7.82641204317915 chr12 76956987 76958941 + 7.82641204317915 NA intron (NM_001146176, intron 1 of 3) intron (NM_001146176, intron 1 of 3) 4284 NM_008558 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak2_100_999_-0.40893609105663_9.76131623913377_7.82637580607026 chr7 100862244 100863688 + 7.82637580607026 NA intron (NM_177073, intron 1 of 10) CpG 447 NM_177073 320100 Mm.40336 NM_177073 ENSMUSG00000008318 Relt E430021K24Rik|Tnfrsf19l RELT tumor necrosis factor receptor protein-coding common_peak1_167_1111_0.33837050463406_10.2881263250405_7.8261559114107 chr8 86838875 86840249 + 7.8261559114107 NA Intergenic MIRc|SINE|MIR 45696 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_127_760_0.404337553180691_9.77392142009389_7.82305633636166 chr1 57406053 57407492 + 7.82305633636166 NA promoter-TSS (NM_001037742) promoter-TSS (NM_001037742) -98 NM_001302963 68736 Mm.288490 NM_001037742 ENSMUSG00000048495 Tyw5 1110034B05Rik tRNA-yW synthesizing protein 5 protein-coding common_peak2_64_631_-0.526866227844206_9.040347634255_7.82293330228957 chr5 119347685 119349680 + 7.82293330228957 NA Intergenic Intergenic -148664 NR_046033 665194 Mm.491047 NR_046033 ENSMUSG00000107334 Gm7538 EG665194 predicted gene 7538 ncRNA common_peak2_78_771_-0.470357946154763_9.3572780641907_7.82208978399196 chr13 95684279 95687479 + 7.82208978399196 NA intron (NM_027711, intron 14 of 35) intron (NM_027711, intron 14 of 35) -11041 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak2_70_322_0.597769191153093_8.63427495027047_7.82206651141306 chr9 66123629 66124828 + 7.82206651141306 NA intron (NM_019727, intron 1 of 14) intron (NM_019727, intron 1 of 14) 658 NM_019727 56440 Mm.271891 NM_019727 ENSMUSG00000032382 Snx1 - sorting nexin 1 protein-coding common_peak2_185_1278_0.316628483192309_10.4791147904778_7.82101392568997 chr7 104243480 104245636 + 7.82101392568997 NA 5' UTR (NM_030684, exon 1 of 8) 5' UTR (NM_030684, exon 1 of 8) 101 NM_030684 94094 Mm.326945 NM_030684 ENSMUSG00000056144 Trim34a Trim34|Trim34-1 tripartite motif-containing 34A protein-coding common_peak1_40_398_-0.678801671156919_8.30084410064389_7.8194677097766 chr12 69385529 69386110 + 7.8194677097766 NA Intergenic Intergenic 13669 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak1_319_2653_0.223630817006006_11.4857680638732_7.81797136354252 chr10 81296653 81299461 + 7.81797136354252 NA intron (NM_001293646, intron 1 of 18) intron (NM_001293646, intron 1 of 18) 5094 NM_001146687 18717 Mm.24222 NM_008844 ENSMUSG00000034902 Pip5k1c AI115456|AI835305|Pip5kIgamma phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma protein-coding common_peak1_28_287_-0.821261686929744_7.75929415797744_7.81758072605183 chr19 8723530 8724098 + 7.81758072605183 NA promoter-TSS (NM_001161413) promoter-TSS (NM_001161413) 327 NR_002896 83673 Mm.292489 NR_002896 ENSMUSG00000108414 Snhg1 - small nucleolar RNA host gene 1 ncRNA common_peak2_150_958_0.363133379967421_10.0869536950018_7.81593239972412 chr17 6996794 6999340 + 7.81593239972412 NA exon (NM_026611, exon 9 of 9) exon (NM_026611, exon 9 of 9) 19207 NM_026611 68195 Mm.181237 NM_026611 ENSMUSG00000094724 Rnaset2b 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2B protein-coding common_peak1_608_6154_0.148790798559503_12.6619385406516_7.81534210655569 chr7 16311509 16314672 + 7.81534210655569 NA intron (NM_133234, intron 2 of 3) intron (NM_133234, intron 2 of 3) 3507 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak2_240_1817_0.267715011060542_10.9619939897244_7.8130221164986 chr13 49241193 49244782 + 7.8130221164986 NA intron (NM_028340, intron 1 of 4) intron (NM_028340, intron 1 of 4) 5176 NM_025491 66329 Mm.34308 NM_025491 ENSMUSG00000021384 Susd3 1700017I11Rik|2810440J20Rik sushi domain containing 3 protein-coding common_peak1_232_1736_0.273729522163457_10.8992467997921_7.81262384225858 chr15 83463447 83464964 + 7.81262384225858 NA intron (NM_001159509, intron 1 of 10) CpG 401 NM_001159509 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_200_1421_0.300972466683589_10.6241919829612_7.81259860757657 chr9 105494352 105496149 + 7.81259860757657 NA promoter-TSS (NM_001253836) promoter-TSS (NM_001253836) -117 NM_001253836 235574 Mm.326247 NM_175025 ENSMUSG00000032570 Atp2c1 1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1 ATPase, Ca++-sequestering protein-coding unique_peak2_12_144_-1.25110015656036_6.55435901173476_7.81195638772321 chr4 150217279 150218035 + 7.81195638772321 NA Intergenic Intergenic -16522 NM_009802 12353 Mm.232523 NM_009802 ENSMUSG00000028972 Car6 Ca6|DOC1 carbonic anhydrase 6 protein-coding common_peak1_12_144_-1.25110015656036_6.55435901173476_7.81195638772321 chrX 109012792 109013182 + 7.81195638772321 NA intron (NM_016710, intron 1 of 5) intron (NM_016710, intron 1 of 5) 393 NM_016710 50887 Mm.298443 NM_016710 ENSMUSG00000031245 Hmgn5 GARP45|NBP-45|Nsbp1 high-mobility group nucleosome binding domain 5 protein-coding common_peak2_129_1311_-0.354025173098831_10.1805394180687_7.81067727938683 chr10 93402093 93404683 + 7.81067727938683 NA Intergenic Tigger5|DNA|TcMar-Tigger -29719 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA unique_peak1_16_25_1.70309654283308_5.55198798955763_7.81024305381297-4 chr8 85492083 85492447 + 7.81024305381297 NA promoter-TSS (NM_173866) promoter-TSS (NM_173866) -352 NM_173866 108682 Mm.200423 NM_173866 ENSMUSG00000031700 Gpt2 4631422C05Rik|ALT2|AU014768|AU041193|C87201 glutamic pyruvate transaminase (alanine aminotransferase) 2 protein-coding unique_peak1_16_25_1.70309654283308_5.55198798955763_7.81024305381297-3 chr8 83719249 83719712 + 7.81024305381297 NA exon (NM_197982, exon 2 of 11) exon (NM_197982, exon 2 of 11) 4303 NM_197982 68278 Mm.28222 NM_197982 ENSMUSG00000005481 Ddx39 2610307C23Rik|BAT1|DDXL|Ddx39a|URH49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 protein-coding unique_peak1_16_25_1.70309654283308_5.55198798955763_7.81024305381297-2 chr2 6674443 6674918 + 7.81024305381297 NA intron (NM_001310447, intron 1 of 11) intron (NM_001310447, intron 1 of 11) 46982 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding unique_peak1_16_25_1.70309654283308_5.55198798955763_7.81024305381297-5 chr8 86876430 86876829 + 7.81024305381297 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 8629 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak1_16_25_1.70309654283308_5.55198798955763_7.81024305381297 chr18 65009204 65009714 + 7.81024305381297 NA intron (NM_001114386, intron 2 of 30) intron (NM_001114386, intron 2 of 30) -14068 NM_031881 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding common_peak1_397_3538_0.194468058608544_11.8863600757295_7.80855762737486 chr7 30955819 30958046 + 7.80855762737486 NA promoter-TSS (NM_011680) promoter-TSS (NM_011680) -129 NM_011680 22282 Mm.322453 NM_011680 ENSMUSG00000058239 Usf2 Usf-2|bHLHb12 upstream transcription factor 2 protein-coding common_peak2_368_3203_0.204053864963283_11.7476853648904_7.80836753866751 chr7 104313242 104316624 + 7.80836753866751 NA promoter-TSS (NR_040749) promoter-TSS (NR_040749) -98 NR_040749 622070 Mm.486406 NR_040749 ENSMUSG00000087175 Gm15133 OTTMUSG00000019186 predicted gene 15133 ncRNA common_peak1_36_361_-0.720062235871795_8.13981476914731_7.80621422648294 chr8 123032545 123033224 + 7.80621422648294 NA intron (NR_037865, intron 1 of 13) B1_Mur3|SINE|Alu 9400 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak2_14_162_-1.16668403281973_6.76538613782121_7.806132487541 chr11 87967680 87968452 + 7.806132487541 NA Intergenic Intergenic 18519 NM_001168472 68097 Mm.246436 NM_026556 ENSMUSG00000020483 Dynll2 1700064A15Rik|6720463E02Rik|C87222|DLC8|DLC8b|Dlc2 dynein light chain LC8-type 2 protein-coding common_peak2_203_1450_0.298063595433424_10.6518636017835_7.80484133062254 chr12 16893803 16895922 + 7.80484133062254 NA promoter-TSS (NM_009072) promoter-TSS (NM_009072) -116 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding common_peak1_90_466_0.505066303010386_9.11981189121486_7.80374117691446 chr12 86818247 86819266 + 7.80374117691446 NA Intergenic Intergenic 66058 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_370_4239_-0.190570674741981_11.9545632120796_7.80249135471612 chr2 144263782 144271731 + 7.80249135471612 NA intron (NM_001199188, intron 2 of 13) intron (NM_001199188, intron 2 of 13) -1554 NR_030762 100313519 Mm.453538 NR_030762 ENSMUSG00000077714 Snord17 MBI-43 small nucleolar RNA, C/D box 17 snoRNA common_peak1_20_215_-0.97741285836497_7.26618107298098_7.80115051758358 chr1 98130583 98131048 + 7.80115051758358 NA promoter-TSS (NR_040439) promoter-TSS (NR_040439) -652 NR_040439 69030 Mm.402692 NR_040439 ENSMUSG00000100182 1810006J02Rik - RIKEN cDNA 1810006J02 gene ncRNA common_peak1_20_215_-0.97741285836497_7.26618107298098_7.80115051758358-2 chr12 102744567 102745086 + 7.80115051758358 NA exon (NM_177140, exon 2 of 2) exon (NM_177140, exon 2 of 2) 1066 NM_177140 320351 Mm.86546 NM_177140 ENSMUSG00000046675 Tmem251 D230037D09Rik transmembrane protein 251 protein-coding common_peak1_20_215_-0.97741285836497_7.26618107298098_7.80115051758358-3 chr14 52244074 52244573 + 7.80115051758358 NA Intergenic Intergenic -6751 NM_201637 67772 Mm.289934 NM_201637 ENSMUSG00000053754 Chd8 5830451P18Rik|AU015341|Duplin|HELSNF1|mKIAA1564 chromodomain helicase DNA binding protein 8 protein-coding common_peak1_60_591_-0.544933914581977_8.93698640833796_7.79863366909524 chr12 76957138 76958449 + 7.79863366909524 NA intron (NM_001146176, intron 1 of 3) intron (NM_001146176, intron 1 of 3) 4455 NM_008558 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak2_60_591_-0.544933914581977_8.93698640833796_7.79863366909524 chr8 57636784 57638970 + 7.79863366909524 NA intron (NM_144731, intron 1 of 11) intron (NM_144731, intron 1 of 11) -13876 NR_040698 100502619 Mm.393851 NR_040698 AW046200 - expressed sequence AW046200 ncRNA common_peak1_47_464_-0.620699126716943_8.55073734263692_7.79720888622326 chr7 127180181 127180926 + 7.79720888622326 NA Intergenic Intergenic 15524 NM_001285907 70233 Mm.28050 NM_027353 ENSMUSG00000042502 Cd2bp2 1500011B02Rik|2410024K20Rik|AW048183 CD2 antigen (cytoplasmic tail) binding protein 2 protein-coding common_peak2_47_464_-0.620699126716943_8.55073734263692_7.79720888622326 chr14 79330615 79332297 + 7.79720888622326 NA Intergenic Intergenic -29821 NM_025427 66214 Mm.29811 NM_025427 ENSMUSG00000022018 Rgcc 1190002H23Rik|Rgc-32|Rgc32 regulator of cell cycle protein-coding common_peak1_207_1489_0.294161562850476_10.6881773967748_7.79527203527316 chr1 194991792 194995297 + 7.79527203527316 NA Intergenic Intergenic -16585 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA common_peak1_121_711_0.41539833126693_9.68343259659986_7.79460443503983 chr13 101657278 101658635 + 7.79460443503983 NA Intergenic MLT1A0|LTR|ERVL-MaLR 34674 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_125_744_0.407124855788615_9.74465904324383_7.79016632033039 chr1 128785892 128788545 + 7.79016632033039 NA Intergenic Intergenic -194919 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_76_364_0.564968887005687_8.79423709727022_7.78941887883389 chr7 27673813 27674772 + 7.78941887883389 NA promoter-TSS (NM_198417) promoter-TSS (NM_198417) 289 NM_001290528 269881 Mm.389883 NM_001081292 ENSMUSG00000040390 Map3k10 BC028668|BC046514|MST|Mlk2 mitogen-activated protein kinase kinase kinase 10 protein-coding common_peak1_347_3939_-0.197957461305174_11.8450011836912_7.78704838914468 chr9 65548901 65552999 + 7.78704838914468 NA Intergenic Intergenic 29137 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding unique_peak2_6_92_-1.70581868346282_5.68624946937662_7.78665171757605 chr19 5746957 5747706 + 7.78665171757605 NA intron (NM_008520, intron 7 of 27) intron (NM_008520, intron 7 of 27) 6427 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding unique_peak2_6_92_-1.70581868346282_5.68624946937662_7.78665171757605-2 chr4 155421902 155422526 + 7.78665171757605 NA promoter-TSS (NR_102287) promoter-TSS (NR_102287) -510 NR_102284 641454 Mm.150322 NR_102283 ENSMUSG00000084803 5830444B04Rik - RIKEN cDNA 5830444B04 gene ncRNA unique_peak2_8_109_-1.50328666283835_6.02971638210549_7.78574342504097 chr11 28339465 28340167 + 7.78574342504097 NA Intergenic Intergenic 244508 NM_001166661 216613 Mm.93759 NM_181577 ENSMUSG00000032878 Ccdc85a - coiled-coil domain containing 85A protein-coding common_peak2_50_193_0.747757934940329_7.97379180965729_7.78523728256927 chr8 69120818 69122125 + 7.78523728256927 NA Intergenic Intergenic 19482 NM_199364 211134 Mm.409446 NM_199364 ENSMUSG00000036306 Lzts1 F37|FEZ1|PSD-Zip70 leucine zipper, putative tumor suppressor 1 protein-coding common_peak1_65_640_-0.520248287771505_9.06405640273299_7.78176705027285 chr5 31767020 31767920 + 7.78176705027285 NA intron (NM_181279, intron 5 of 13) MTD|LTR|ERVL-MaLR 69420 NM_181282 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Bre 6030405P19Rik|AI429776|B830038C02Rik brain and reproductive organ-expressed protein protein-coding common_peak1_23_241_-0.9050877691825_7.46631935268334_7.77967037569528-2 chr9 21073032 21073620 + 7.77967037569528 NA TTS (NM_027911) TTS (NM_027911) 188 NM_001039824 68165 Mm.490294 NM_001039824 ENSMUSG00000079677 Fdx1l B230118G17Rik|Fdx2 ferredoxin 1-like protein-coding unique_peak2_23_241_-0.9050877691825_7.46631935268334_7.77967037569528 chr2 75981341 75982297 + 7.77967037569528 NA 5' UTR (NM_030188, exon 1 of 1) 5' UTR (NM_030188, exon 1 of 1) 148 NM_030188 78802 Mm.282339 NM_030188 ENSMUSG00000075271 Ttc30a1 4930506L13Rik tetratricopeptide repeat domain 30A1 protein-coding common_peak1_23_241_-0.9050877691825_7.46631935268334_7.77967037569528 chr14 61589470 61589926 + 7.77967037569528 NA Intergenic Intergenic -8528 NM_001164220 66597 Mm.491258 NM_023233 ENSMUSG00000035235 Trim13 3110001L12Rik|CAR|LEU5|RNF77|Rfp2 tripartite motif-containing 13 protein-coding common_peak1_26_268_-0.849254795717028_7.64683496469811_7.77868205663145 chrX 70385876 70386322 + 7.77868205663145 NA 5' UTR (NM_026787, exon 1 of 3) 5' UTR (NM_026787, exon 1 of 3) 186 NM_026787 68618 Mm.293255 NM_026787 ENSMUSG00000045237 1110012L19Rik - RIKEN cDNA 1110012L19 gene protein-coding common_peak2_93_489_0.493105459609804_9.18319066880747_7.77852339654388 chr3 30995118 30996450 + 7.77852339654388 NA promoter-TSS (NM_008857) promoter-TSS (NM_008857) 13 NM_008857 18759 Mm.291554 NM_008857 ENSMUSG00000037643 Prkci 2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165 protein kinase C, iota protein-coding common_peak2_105_1051_-0.396564912662834_9.84063653296089_7.77815564601491 chr17 87024599 87026582 + 7.77815564601491 NA promoter-TSS (NM_019936) promoter-TSS (NM_019936) 29 NM_019936 56724 Mm.109329 NM_019936 ENSMUSG00000024146 Cript 1200020A08Rik|AA589469 cysteine-rich PDZ-binding protein protein-coding common_peak2_102_1020_-0.404219267101062_9.79365751732727_7.77780773748047 chr8 33641121 33642591 + 7.77780773748047 NA exon (NM_178648, exon 1 of 8) exon (NM_178648, exon 1 of 8) 120 NM_178648 108159 Mm.29301 NM_178648 ENSMUSG00000052906 Ubxn8 D0H8S2298E|Rep-8|Rep8h|Ubxd6 UBX domain protein 8 protein-coding common_peak2_43_152_0.829022211187655_7.67189894828648_7.77759222678096 chr10 82240622 82241689 + 7.77759222678096 NA intron (NM_001105557, intron 1 of 3) intron (NM_001105557, intron 1 of 3) 120 NM_001105557 237411 NM_172789 ENSMUSG00000062931 Zfp938 B230315N10Rik zinc finger protein 938 protein-coding common_peak1_34_103_0.981005996382442_7.19094271633231_7.77642363909584 chr10 61648602 61649176 + 7.77642363909584 NA intron (NM_026438, intron 1 of 10) CpG 268 NM_026438 67895 Mm.28897 NM_026438 ENSMUSG00000020089 Ppa1 2010317E03Rik|Pyp pyrophosphatase (inorganic) 1 protein-coding common_peak1_34_103_0.981005996382442_7.19094271633231_7.77642363909584-2 chr11 107411800 107412410 + 7.77642363909584 NA intron (NM_145823, intron 1 of 9) B1_Mus1|SINE|Alu 58615 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_19_205_-0.995366299552442_7.188817377407_7.77642363909584 chr12 55489951 55490362 + 7.77642363909584 NA intron (NM_010907, intron 5 of 5) intron (NM_010907, intron 5 of 5) 2491 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak1_97_967_-0.415374689177554_9.71117589268582_7.77596964288687 chr10 81704550 81705446 + 7.77596964288687 NA intron (NM_001243067, intron 1 of 3) CpG 173 NM_001243067 73610 Mm.490466 NM_001243067 ENSMUSG00000096795 Zfp433 1700123A16Rik zinc finger protein 433 protein-coding unique_peak2_5_83_-1.83176657705938_5.47643413424907_7.77572678768527 chr14 52343325 52343860 + 7.77572678768527 NA Intergenic Intergenic 6452 NM_001012269 258008 Mm.377327 NM_001012269 ENSMUSG00000095030 Olfr1513 MOR223-10|MOR223-7P olfactory receptor 1513 protein-coding common_peak2_35_108_0.963113348282097_7.24974099891798_7.77560365525395 chr6 119395404 119396306 + 7.77560365525395 NA intron (NM_197985, intron 1 of 7) intron (NM_197985, intron 1 of 7) 21628 NM_197985 68465 Mm.291826 NM_197985 ENSMUSG00000030168 Adipor2 1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2 adiponectin receptor 2 protein-coding common_peak1_35_108_0.963113348282097_7.24974099891798_7.77560365525395 chr5 43841263 43841824 + 7.77560365525395 NA intron (NM_009763, intron 8 of 8) intron (NM_009763, intron 8 of 8) 22650 NM_009763 12182 Mm.246332 NM_009763 ENSMUSG00000029082 Bst1 114/A10|A530073F09|BP-3|Bp3|Bsta1|CD157|Ly65 bone marrow stromal cell antigen 1 protein-coding common_peak2_246_1879_0.262852171906724_11.0079430325184_7.77523096819907 chr2 167420650 167422732 + 7.77523096819907 NA promoter-TSS (NM_148929) promoter-TSS (NM_148929) -19 NM_148929 77031 Mm.278924 NM_148929 ENSMUSG00000039463 Slc9a8 1200006P13Rik|6430709P13Rik|AI182282|NHE-8|NHE8 solute carrier family 9 (sodium/hydrogen exchanger), member 8 protein-coding common_peak1_71_329_0.591587769999563_8.6621160992456_7.77286295348453 chr11 31671250 31671929 + 7.77286295348453 NA exon (NM_001024919, exon 1 of 4) exon (NM_001024919, exon 1 of 4) 273 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_224_1657_0.279055932947202_10.8347562579694_7.77141458946505 chr5 21054373 21056139 + 7.77141458946505 NA intron (NM_011203, intron 1 of 17) CpG 541 NM_011203 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak2_185_1279_0.315500937186584_10.4796785634807_7.77063582422449 chr2 79002925 79006734 + 7.77063582422449 NA Intergenic Lx2B|LINE|L1 135782 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_57_236_0.686532376800666_8.23200943729859_7.77023954518631 chr11 67965906 67966980 + 7.77023954518631 NA promoter-TSS (NM_027963) promoter-TSS (NM_027963) -40 NM_018768 55943 Mm.3973 NM_018768 ENSMUSG00000020903 Stx8 0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB syntaxin 8 protein-coding common_peak2_121_1223_-0.366256080459323_10.074259802463_7.76840725877746 chr16 44811012 44813503 + 7.76840725877746 NA Intergenic Intergenic -8471 NM_207244 239849 Mm.445045 NM_207244 ENSMUSG00000062082 Cd200r4 F630107N04Rik|MCD200RLa CD200 receptor 4 protein-coding common_peak2_91_474_0.499901723247913_9.14173456484227_7.76691866672176 chr6 91472862 91474539 + 7.76691866672176 NA promoter-TSS (NM_133928) promoter-TSS (NM_133928) -51 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding common_peak1_152_1565_-0.321063204010301_10.4523368952859_7.76662470079173 chr5 145201041 145202156 + 7.76662470079173 NA exon (NM_023322, exon 1 of 3) exon (NM_023322, exon 1 of 3) 284 NM_023322 67235 Mm.432480 NM_023322 ENSMUSG00000029627 Zkscan14 2310046C23Rik|2810437E14Rik|Zfp99|Znf394 zinc finger with KRAB and SCAN domains 14 protein-coding common_peak1_49_187_0.758038651645103_7.93360817750019_7.76523643342532 chr11 77215671 77216636 + 7.76523643342532 NA promoter-TSS (NM_177710) promoter-TSS (NM_177710) -272 NM_177710 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot homolog 2 (Drosophila) protein-coding common_peak1_24_56_1.25312517797164_6.45945260315056_7.76477430276366 chr6 50412977 50413424 + 7.76477430276366 NA intron (NM_001163645, intron 2 of 21) RMER10A|LTR|ERVL -30363 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding unique_peak1_24_56_1.25312517797164_6.45945260315056_7.76477430276366 chr9 35109726 35110357 + 7.76477430276366 NA intron (NM_009178, intron 1 of 10) intron (NM_009178, intron 1 of 10) -6687 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak1_86_852_-0.443604100652438_9.51459988099207_7.76274708337626 chr6 122741169 122742748 + 7.76274708337626 NA intron (NM_011401, intron 1 of 9) intron (NM_011401, intron 1 of 9) 787 NM_011401 20527 Mm.395108 NM_011401 ENSMUSG00000003153 Slc2a3 AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3 solute carrier family 2 (facilitated glucose transporter), member 3 protein-coding common_peak2_53_211_0.720899423462752_8.08837016629457_7.7622045205883 chr7 63815908 63817112 + 7.7622045205883 NA Intergenic Intergenic -100347 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak1_40_135_0.873980423815087_7.52445305315788_7.76205434716505 chr4 119807684 119808658 + 7.76205434716505 NA Intergenic MLT1J|LTR|ERVL-MaLR -6507 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak2_51_503_-0.595246367672628_8.6796567396636_7.76194442425169 chr8 70211660 70213518 + 7.76194442425169 NA promoter-TSS (NM_001007570) promoter-TSS (NM_001007570) -308 NM_001007570 73095 Mm.185413 NM_001007570 ENSMUSG00000002346 Slc25a42 2900084M01Rik solute carrier family 25, member 42 protein-coding common_peak2_280_2233_0.242178016717746_11.2465024788422_7.76099748945309 chr6 136963879 136968725 + 7.76099748945309 NA Intergenic MTC|LTR|ERVL-MaLR 11779 NM_023898 78600 Mm.290622 NM_023898 ENSMUSG00000064330 Pde6h A930033D18Rik|PDEgamma phosphodiesterase 6H, cGMP-specific, cone, gamma protein-coding common_peak1_67_660_-0.511745578160809_9.11263367242729_7.76075173113742 chr1 75316551 75317523 + 7.76075173113742 NA promoter-TSS (NM_016878) promoter-TSS (NM_016878) -20 NM_016878 13437 Mm.24680 NM_016878 ENSMUSG00000026209 Dnpep AA407814 aspartyl aminopeptidase protein-coding common_peak2_38_124_0.907159164945774_7.41936386713497_7.76044449895285 chr19 11386783 11387809 + 7.76044449895285 NA intron (NM_001310331, intron 4 of 6) intron (NM_001310331, intron 4 of 6) 11808 NM_001310331 666907 NM_001310331 ENSMUSG00000101389 Ms4a4a EG666907 membrane-spanning 4-domains, subfamily A, member 4A protein-coding common_peak1_38_124_0.907159164945774_7.41936386713497_7.76044449895285 chr16 23982793 23983509 + 7.76044449895285 NA intron (NM_009744, intron 1 of 9) intron (NM_009744, intron 1 of 9) 5461 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak2_297_3299_-0.216712995839201_11.5798938112136_7.76014677287818 chr4 127021158 127023781 + 7.76014677287818 NA intron (NR_045010, intron 1 of 11) CpG 1168 NM_023603 71514 Mm.257276 NM_023603 ENSMUSG00000028820 Sfpq 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|OTTMUSG00000009329|PSF|REP1 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) protein-coding common_peak1_292_2361_0.235800413795692_11.323693456295_7.75872742217528 chr14 74946124 74948510 + 7.75872742217528 NA intron (NM_001252132, intron 1 of 18) CpG 560 NM_001252132 380916 Mm.288868 NM_001033439 ENSMUSG00000068015 Lrch1 4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding common_peak1_109_1093_-0.387493693220286_9.90165017618241_7.75830945647331 chr2 157200931 157202243 + 7.75830945647331 NA intron (NM_011249, intron 1 of 21) intron (NM_011249, intron 1 of 21) 2947 NM_011249 19650 Mm.244671 NM_011249 ENSMUSG00000027641 Rbl1 AW547426|PRB1|p107 retinoblastoma-like 1 (p107) protein-coding common_peak1_78_770_-0.468487958801719_9.35634307051417_7.75732169523911 chr11 96966865 96967964 + 7.75732169523911 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 10274 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak1_351_3011_0.209740932767447_11.6613765210557_7.75708404536985 chr18 34858904 34861695 + 7.75708404536985 NA promoter-TSS (NM_007913) promoter-TSS (NM_007913) -908 NM_007913 13653 Mm.181959 NM_007913 ENSMUSG00000038418 Egr1 A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr early growth response 1 protein-coding common_peak1_31_314_-0.776342444075755_7.9110367963494_7.75614407073158-2 chr4 59198025 59198838 + 7.75614407073158 NA intron (NM_011673, intron 1 of 8) intron (NM_011673, intron 1 of 8) 8881 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak1_31_314_-0.776342444075755_7.9110367963494_7.75614407073158 chr19 3912970 3913625 + 7.75614407073158 NA promoter-TSS (NM_144870) promoter-TSS (NM_144870) -523 NM_001271444 225887 Mm.44227 NM_144870 ENSMUSG00000059734 Ndufs8 BC021616|CI-23kD|TYKY NADH dehydrogenase (ubiquinone) Fe-S protein 8 protein-coding common_peak2_261_2034_0.25288649387962_11.1172563260934_7.75569750519518 chr5 130170601 130172997 + 7.75569750519518 NA promoter-TSS (NM_001199059) promoter-TSS (NM_001199059) -20 NM_001199059 56715 Mm.288639 NM_019983 ENSMUSG00000025340 Rabgef1 Rab5ef|Rabex5|Rin2 RAB guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_54_531_-0.573991417115273_8.76828672694355_7.75269638019441 chr1 86359541 86360442 + 7.75269638019441 NA promoter-TSS (NM_010880) promoter-TSS (NM_010880) 417 NR_015507 319336 Mm.389155 NR_015507 ENSMUSG00000073627 C130036L24Rik ENSMUSG00000073627 RIKEN cDNA C130036L24 gene ncRNA common_peak1_320_2666_0.222102825958132_11.49205352253_7.75181899643912 chr8 109777882 109779908 + 7.75181899643912 NA 5' UTR (NM_001301211, exon 1 of 23) 5' UTR (NM_001301211, exon 1 of 23) 312 NM_001301211 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding common_peak2_149_1530_-0.323496548023764_10.4185102934879_7.75055419906996 chr3 84038608 84041203 + 7.75055419906996 NA intron (NM_172681, intron 1 of 34) CpG 256 NM_172681 229473 Mm.28838 NM_172681 ENSMUSG00000033767 D930015E06Rik Kiaa0922|mKIAA0922 RIKEN cDNA D930015E06 gene protein-coding common_peak1_168_1745_-0.302023995100031_10.6188258460794_7.75020929962866 chr9 114015540 114017720 + 7.75020929962866 NA intron (NM_178624, intron 2 of 14) intron (NM_178624, intron 2 of 14) 10121 NM_178624 72179 Mm.386808 NM_178624 ENSMUSG00000032507 Fbxl2 2810423A21Rik|Fbl3 F-box and leucine-rich repeat protein 2 protein-coding unique_peak1_18_32_1.55597008403844_5.82237916137767_7.74948433777717-2 chr8 122993852 122994283 + 7.74948433777717 NA intron (NR_037865, intron 1 of 13) MTEb|LTR|ERVL-MaLR 48217 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak1_18_32_1.55597008403844_5.82237916137767_7.74948433777717 chr11 119976288 119976804 + 7.74948433777717 NA intron (NM_130862, intron 3 of 13) B3A|SINE|B2 33454 NM_130862 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding unique_peak1_18_32_1.55597008403844_5.82237916137767_7.74948433777717-3 chr8 128357260 128357811 + 7.74948433777717 NA Intergenic CpG -1538 NM_008737 18186 Mm.271745 NM_008737 ENSMUSG00000025810 Nrp1 C530029I03|NP-1|NPN-1|Npn1|Nrp neuropilin 1 protein-coding common_peak1_58_571_-0.554344931736564_8.88269887091011_7.74809482799203 chr17 35868474 35869326 + 7.74809482799203 NA intron (NM_001146710, intron 2 of 3) intron (NM_001146710, intron 2 of 3) 2285 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding common_peak2_507_4868_0.166025531277628_12.3324225509079_7.74639909843546 chr15 38298214 38302374 + 7.74639909843546 NA intron (NM_001289471, intron 1 of 4) CpG 417 NM_013692 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding common_peak1_71_699_-0.49330112758695_9.20456054803885_7.7450849922223 chr2 158624654 158625572 + 7.7450849922223 NA 5' UTR (NM_175419, exon 1 of 9) 5' UTR (NM_175419, exon 1 of 9) 200 NM_175419 109275 Mm.27747 NM_175419 ENSMUSG00000037761 Actr5 AA545173|B430109J19Rik ARP5 actin-related protein 5 protein-coding unique_peak2_27_277_-0.832376322705581_7.70275291137072_7.74209237130903 chr7 82601509 82602871 + 7.74209237130903 NA exon (NM_001190374, exon 26 of 30) exon (NM_001190374, exon 26 of 30) 46338 NM_177894 330577 Mm.222812 NM_177894 ENSMUSG00000038570 Saxo2 1700129I04Rik|D030069K18|Fam154b stabilizer of axonemal microtubules 2 protein-coding common_peak1_43_426_-0.651682205740183_8.4122511567504_7.74011309321671 chr11 116086193 116087002 + 7.74011309321671 NA intron (NM_016852, intron 1 of 7) intron (NM_016852, intron 1 of 7) 367 NM_016852 22378 Mm.284792 NM_016852 ENSMUSG00000034341 Wbp2 - WW domain binding protein 2 protein-coding common_peak1_28_74_1.11984462401669_6.78874100250422_7.73950774157027 chr2 26483942 26484515 + 7.73950774157027 NA intron (NM_008714, intron 4 of 33) intron (NM_008714, intron 4 of 33) -14109 NR_105962 102465602 NR_105962 ENSMUSG00000098548 Mir6996 Gm27531|mmu-mir-6996 microRNA 6996 ncRNA common_peak2_39_130_0.884323537279682_7.47558477017729_7.73816911375227 chr15 28080451 28081387 + 7.73816911375227 NA Intergenic MLT1A1|LTR|ERVL-MaLR -55071 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_170_1768_-0.300085096986999_10.638675784197_7.73733027988806 chr4 133885394 133888612 + 7.73733027988806 NA intron (NM_009097, intron 1 of 21) intron (NM_009097, intron 1 of 21) 794 NM_001285505 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak1_83_415_0.530259548030118_8.96556949215615_7.73701612436667 chr5 108461019 108462126 + 7.73701612436667 NA intron (NM_172716, intron 1 of 10) CpG 240 NM_172716 69587 Mm.261218 NM_172716 ENSMUSG00000033623 Pcgf3 2310035N15Rik|AI662857|D630042K08Rik|DONG1|E430039C14|RNF3A|Rnf3 polycomb group ring finger 3 protein-coding common_peak1_105_582_0.455002003428971_9.41485307491498_7.73603762864642 chr17 6476000 6477522 + 7.73603762864642 NA Intergenic CpG -25767 NR_033520 547127 Mm.297552 NM_001045538 Tmem181b-ps Tmem181b transmembrane protein 181B, pseudogene pseudo common_peak1_214_1559_0.286502443382661_10.7505815354409_7.73568870065311 chr5 124075063 124077544 + 7.73568870065311 NA intron (NM_019875, intron 8 of 11) intron (NM_019875, intron 8 of 11) 19495 NM_019875 56325 Mm.254839 NM_019875 ENSMUSG00000029408 Abcb9 TAPL|mKIAA1520 ATP-binding cassette, sub-family B (MDR/TAP), member 9 protein-coding common_peak2_56_230_0.692749678134116_8.19812388048311_7.73557470922023 chr4 155216519 155217431 + 7.73557470922023 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 5560 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_56_230_0.692749678134116_8.19812388048311_7.73557470922023 chr12 75726310 75727205 + 7.73557470922023 NA intron (NM_030750, intron 1 of 2) intron (NM_030750, intron 1 of 2) 8972 NM_030750 81535 Mm.280199 NM_030750 ENSMUSG00000021054 Sgpp1 AI463453|SPP|SPP1|Spph1 sphingosine-1-phosphate phosphatase 1 protein-coding common_peak1_56_230_0.692749678134116_8.19812388048311_7.73557470922023-2 chr4 155216497 155217413 + 7.73557470922023 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 5580 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_110_1104_-0.385912486914098_9.91687441082174_7.73521354060119 chr11 93967135 93969752 + 7.73521354060119 NA promoter-TSS (NM_008704) promoter-TSS (NM_008704) 78 NM_008704 18102 Mm.439702 NM_008704 ENSMUSG00000037601 Nme1 AL024257|NDPK-A|NM23-M1|NM23A NME/NM23 nucleoside diphosphate kinase 1 protein-coding common_peak1_34_341_-0.736406800362364_8.04964911470472_7.73500946428255 chr16 4558756 4559563 + 7.73500946428255 NA intron (NM_031182, intron 1 of 6) CpG 561 NM_031182 83383 Mm.273210 NM_031182 ENSMUSG00000005718 Tfap4 AI642933|AP-4|D930048N17Rik|Tcfap4|bHLHc41 transcription factor AP4 protein-coding common_peak1_52_205_0.729241238259894_8.05112114631316_7.73500946428255 chr9 57273160 57273795 + 7.73500946428255 NA Intergenic Intergenic -10878 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding common_peak2_332_2799_0.216841571685649_11.5596318976752_7.73492051098704 chr11 103131532 103134167 + 7.73492051098704 NA promoter-TSS (NM_027658) promoter-TSS (NM_027658) -490 NM_001130516 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak1_120_1211_-0.366607138837503_10.0598704140542_7.73476765540898 chr6 57580743 57582537 + 7.73476765540898 NA intron (NM_025992, intron 1 of 22) intron (NM_025992, intron 1 of 22) 648 NM_025992 67138 Mm.297393 NM_025992 ENSMUSG00000029798 Herc6 1700121D12Rik|2510038N07Rik|4930427L17Rik|AI451296|CEB1|Herc5 hect domain and RLD 6 protein-coding common_peak2_102_559_0.462264866831772_9.36041545036085_7.73471885532891 chr5 113561694 113563799 + 7.73471885532891 NA intron (NM_177292, intron 3 of 7) intron (NM_177292, intron 3 of 7) 12326 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak1_49_483_-0.606235733951854_8.61574537029867_7.73469944706841 chr9 95959187 95960097 + 7.73469944706841 NA intron (NM_001311130, intron 1 of 41) intron (NM_001311130, intron 1 of 41) 4882 NM_001311130 24127 Mm.291179 NM_011916 ENSMUSG00000032410 Xrn1 Dhm2|exo|mXrn1 5'-3' exoribonuclease 1 protein-coding common_peak1_49_483_-0.606235733951854_8.61574537029867_7.73469944706841-2 chrX 48423704 48424688 + 7.73469944706841 NA 5' UTR (NM_019680, exon 2 of 9) 5' UTR (NM_019680, exon 2 of 9) 38936 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak1_36_114_0.934293600267035_7.31263685107789_7.73387146561432 chr17 7872656 7873423 + 7.73387146561432 NA Intergenic RLTR41A2|LTR|ERV1 -52961 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding common_peak1_36_114_0.934293600267035_7.31263685107789_7.73387146561432-2 chr9 44479058 44479673 + 7.73387146561432 NA Intergenic Intergenic -19771 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak2_16_179_-1.0883168353555_6.94769467865192_7.73081338843536 chrX 167204872 167205943 + 7.73081338843536 NA Intergenic ID_B1|SINE|B4 3811 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_16_179_-1.0883168353555_6.94769467865192_7.73081338843536 chr12 110991985 110992425 + 7.73081338843536 NA Intergenic Intergenic -2193 NR_036598 77878 Mm.293198 NR_036598 6030440G07Rik - RIKEN cDNA 6030440G07 gene ncRNA common_peak1_16_179_-1.0883168353555_6.94769467865192_7.73081338843536-2 chr4 83533487 83533873 + 7.73081338843536 NA intron (NM_001081012, intron 1 of 25) intron (NM_001081012, intron 1 of 25) 8135 NM_001081012 320226 Mm.180032 NM_029117 ENSMUSG00000052407 Ccdc171 4930418J05Rik|4930473A06Rik|A330015D16Rik coiled-coil domain containing 171 protein-coding common_peak2_195_1375_0.303836104581299_10.5781828069927_7.73032197859377 chr3 32508415 32511615 + 7.73032197859377 NA promoter-TSS (NM_144519) promoter-TSS (NM_144519) -535 NM_001161818 67778 Mm.285620 NM_144519 ENSMUSG00000027667 Zfp639 6230400O18Rik|ANC-2H01|ZASC1|Znf639 zinc finger protein 639 protein-coding common_peak2_137_847_0.381287176869952_9.91856404299817_7.72755167373869 chr14 120909959 120912166 + 7.72755167373869 NA promoter-TSS (NM_023579) promoter-TSS (NM_023579) -132 NM_023579 70572 Mm.221452 NM_023579 ENSMUSG00000030662 Ipo5 1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5 importin 5 protein-coding common_peak1_233_1748_0.271375703025848_10.9080024254346_7.72668993398573 chr5 142370437 142372451 + 7.72668993398573 NA Intergenic Intergenic -30053 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf forkhead box K1 protein-coding common_peak1_125_745_0.405189650882901_9.74562664569669_7.72438774817992 chr8 41415868 41417317 + 7.72438774817992 NA intron (NM_013522, intron 1 of 8) intron (NM_013522, intron 1 of 8) 526 NM_013522 14300 Mm.217312 NM_013522 ENSMUSG00000031590 Frg1 - FSHD region gene 1 protein-coding common_peak1_41_407_-0.66833838698664_8.33825614847817_7.72307966699108 chr7 126469200 126469942 + 7.72307966699108 NA intron (NR_110346, intron 4 of 9) intron (NR_110346, intron 4 of 9) 3523 NR_110346 20399 Mm.8538 NM_011363 ENSMUSG00000030733 Sh2b1 AI425885|C530001K22Rik|Irip|Psm|SH2-B|SH2-Bb|Sh2bpsm1|mKIAA1299 SH2B adaptor protein 1 protein-coding unique_peak2_41_407_-0.66833838698664_8.33825614847817_7.72307966699108 chr14 57864391 57866161 + 7.72307966699108 NA intron (NM_029492, intron 4 of 12) intron (NM_029492, intron 4 of 12) 24986 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|ENSMUSG00000055956|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak2_41_407_-0.66833838698664_8.33825614847817_7.72307966699108 chr6 86683834 86685107 + 7.72307966699108 NA promoter-TSS (NM_025665) promoter-TSS (NM_025665) 21 NM_025665 66618 Mm.182650 NM_025665 ENSMUSG00000001158 Snrnp27 2610209M04Rik|AI449063|AU022368|Ry1 small nuclear ribonucleoprotein 27 (U4/U6.U5) protein-coding common_peak1_24_250_-0.885528361814388_7.52877937304358_7.72220242502213 chr13 22035082 22035617 + 7.72220242502213 NA promoter-TSS (NM_175665) promoter-TSS (NM_175665) 294 NM_175659 319168 Mm.250564 NM_175659 ENSMUSG00000069302 Hist1h2ah - histone cluster 1, H2ah protein-coding common_peak2_24_250_-0.885528361814388_7.52877937304358_7.72220242502213 chr12 71039782 71040916 + 7.72220242502213 NA intron (NM_001081195, intron 8 of 23) B1F|SINE|Alu 24382 NM_001081195 238247 Mm.241601 NM_001081195 ENSMUSG00000048118 Arid4a A630009N03|A630067N03Rik|MmRBBP1|Rbbp1 AT rich interactive domain 4A (RBP1-like) protein-coding common_peak2_118_687_0.420807615537546_9.63666856247087_7.72170137936355 chr10 80740947 80742563 + 7.72170137936355 NA intron (NM_007460, intron 1 of 30) intron (NM_007460, intron 1 of 30) 456 NM_007460 11776 Mm.27082 NM_007460 ENSMUSG00000020198 Ap3d1 AA407035|Ap3d|Bolvr|mBLVR1|mh|mocha adaptor-related protein complex 3, delta 1 subunit protein-coding common_peak2_102_1019_-0.40280555308212_9.7929506603178_7.72160733597608 chr11 96966460 96968979 + 7.72160733597608 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 9969 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak2_77_760_-0.472196882709328_9.33565420214888_7.71884422137751 chr14 74846339 74848979 + 7.71884422137751 NA intron (NM_001252132, intron 2 of 18) intron (NM_001252132, intron 2 of 18) 100218 NM_001252132 380916 Mm.288868 NM_001033439 ENSMUSG00000068015 Lrch1 4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding common_peak1_37_369_-0.704404945933066_8.17917898754978_7.71873530174773 chr11 78182999 78183788 + 7.71873530174773 NA promoter-TSS (NR_037683) promoter-TSS (NR_037683) 191 NM_207523 268449 Mm.22723 NM_207523 ENSMUSG00000058546 Rpl23a BC029892|MDA20 ribosomal protein L23A protein-coding common_peak1_133_1352_-0.344790112640457_10.2295510676563_7.71868481112551 chr7 66102564 66104733 + 7.71868481112551 NA Intergenic Lx5|LINE|L1 -5867 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_56_550_-0.561409789020985_8.82520361406067_7.71741943307655 chr19 6340125 6341076 + 7.71741943307655 NA promoter-TSS (NM_001291787) promoter-TSS (NM_001291787) -560 NM_009006 26412 Mm.25860 NM_009006 ENSMUSG00000024948 Map4k2 AI385662|BL44|GCK|Rab8ip mitogen-activated protein kinase kinase kinase kinase 2 protein-coding common_peak2_320_2667_0.221561984324472_11.4923239433468_7.71705062396958 chr15 80710000 80712686 + 7.71705062396958 NA promoter-TSS (NM_144812) promoter-TSS (NM_144812) 30 NM_144812 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak2_52_511_-0.584258234556888_8.70787088272156_7.71637476542754 chr2 165530488 165532116 + 7.71637476542754 NA Intergenic Intergenic 27405 NM_130451 170441 Mm.34147 NM_130451 ENSMUSG00000027661 Slc2a10 AA450473|Glut10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding common_peak1_15_22_1.77269130706815_5.40990760959109_7.71443999571259 chr3 98028161 98028526 + 7.71443999571259 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 14805 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding unique_peak1_15_22_1.77269130706815_5.40990760959109_7.71443999571259 chr1 119709237 119709685 + 7.71443999571259 NA intron (NM_019933, intron 13 of 26) L1_Mus2|LINE|L1 -60461 NM_145506 226352 Mm.253156 NM_145506 ENSMUSG00000026383 Epb41l5 1700030C16Rik|AL022914|BE37|E230025E14Rik|Epb4.1l5|Lulu1|NBL5 erythrocyte membrane protein band 4.1 like 5 protein-coding common_peak1_15_22_1.77269130706815_5.40990760959109_7.71443999571259-2 chr7 58677710 58678104 + 7.71443999571259 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 19705 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_374_3275_0.200535653526979_11.7779874684045_7.71285250392065 chr4 32146975 32152403 + 7.71285250392065 NA Intergenic L2b|LINE|L2 185582 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_100_997_-0.406047811731803_9.75987209947136_7.71262712246436 chr8 33641183 33642451 + 7.71262712246436 NA intron (NM_178648, intron 1 of 7) CpG 159 NM_178648 108159 Mm.29301 NM_178648 ENSMUSG00000052906 Ubxn8 D0H8S2298E|Rep-8|Rep8h|Ubxd6 UBX domain protein 8 protein-coding common_peak1_28_286_-0.816243612163119_7.75678512059413_7.71215593105088 chr13 23763453 23764105 + 7.71215593105088 NA exon (NM_030609, exon 1 of 1) exon (NM_030609, exon 1 of 1) 111 NM_030609 80838 Mm.480242 NM_030609 ENSMUSG00000049539 Hist1h1a H1.1|H1a|H1f1|H1var3 histone cluster 1, H1a protein-coding common_peak2_65_639_-0.517995836040125_9.0629301768673_7.71092626536972 chr5 136198191 136199657 + 7.71092626536972 NA promoter-TSS (NM_025774) promoter-TSS (NM_025774) 30 NM_025774 66801 Mm.425295 NM_025774 ENSMUSG00000039737 Prkrip1 8430424D23Rik|C114 Prkr interacting protein 1 (IL11 inducible) protein-coding common_peak2_90_893_-0.431785978463271_9.58823803195168_7.71059919954458 chr5 122343073 122344924 + 7.71059919954458 NA intron (NM_144912, intron 5 of 10) intron (NM_144912, intron 5 of 10) 10197 NM_144912 231724 Mm.255587 NM_144912 ENSMUSG00000038569 Rad9b A630082N15Rik|BC021784 RAD9 checkpoint clamp component B protein-coding common_peak1_86_437_0.518010771064679_9.03379244513351_7.70818929066629 chr4 82858867 82860188 + 7.70818929066629 NA 5' UTR (NM_026647, exon 1 of 9) 5' UTR (NM_026647, exon 1 of 9) 134 NM_026647 68268 Mm.32047 NM_026647 ENSMUSG00000028403 Zdhhc21 9130404H11Rik|AL024349|D130004H04Rik|dep zinc finger, DHHC domain containing 21 protein-coding common_peak2_187_1963_-0.283223504515961_10.7979674620567_7.70692173076014 chr2 166905317 166907403 + 7.70692173076014 NA intron (NM_023565, intron 1 of 24) CpG 264 NM_023565 110750 Mm.22417 NM_023565 ENSMUSG00000002718 Cse1l 2610100P18Rik|AA407533|Capts|Cas|Xpo2 chromosome segregation 1-like (S. cerevisiae) protein-coding common_peak1_59_250_0.663725189833288_8.30340614886742_7.70632823511641 chr6 119847554 119848587 + 7.70632823511641 NA promoter-TSS (NR_104484) promoter-TSS (NR_104484) 80 NM_053204 111173 Mm.288860 NM_053204 ENSMUSG00000030172 Erc1 4930404L01Rik|5033405M01Rik|9630025C19Rik|B430107L16Rik|CAST2|ELKS|Elks1|RAB6IP2A|RAB6IP2B|Rab6ip2|mKIAA1081 ELKS/RAB6-interacting/CAST family member 1 protein-coding common_peak1_106_1060_-0.392238521558992_9.85508968013527_7.70566188437145 chr7 44986775 44987917 + 7.70566188437145 NA promoter-TSS (NM_001252477) promoter-TSS (NM_001252477) 446 NR_045266 100502630 Mm.490013 NR_045266 ENSMUSG00000087138 Gm15545 OTTMUSG00000023473 predicted gene 15545 ncRNA common_peak2_98_528_0.474330551700138_9.2842891879641_7.70138809262553 chr1 170866798 170868434 + 7.70138809262553 NA intron (NM_001081304, intron 1 of 15) CpG 155 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding common_peak1_179_1224_0.320837226047411_10.4189846469136_7.69930307790248 chr8 33384322 33386444 + 7.69930307790248 NA promoter-TSS (NM_152821) promoter-TSS (NM_152821) 144 NM_001122822 22427 Mm.228805 NM_011721 ENSMUSG00000031583 Wrn AI846146 Werner syndrome homolog (human) protein-coding common_peak2_191_1337_0.307750001009703_10.5397374011463_7.69800555985223 chr4 130106833 130108724 + 7.69800555985223 NA intron (NM_026441, intron 1 of 4) intron (NM_026441, intron 1 of 4) 222 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak2_78_379_0.552243482782369_8.84597734972213_7.69651580795048 chr8 11497026 11498235 + 7.69651580795048 NA promoter-TSS (NM_026995) promoter-TSS (NM_026995) 62 NM_026995 69225 Mm.64911 NM_026995 ENSMUSG00000031505 Naxd 0710008K08Rik|2810407E01Rik|Carkd NAD(P)HX dehydratase protein-coding common_peak2_11_134_-1.28965244014509_6.43198937697828_7.69640909048086 chr3 95928436 95929114 + 7.69640909048086 NA promoter-TSS (NM_023210) promoter-TSS (NM_023210) -482 NM_001253758 66471 Mm.218657 NM_023210 ENSMUSG00000015749 Anp32e 2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding common_peak1_179_1870_-0.29019058330344_10.7244985515891_7.69639068371398 chr17 28697114 28699604 + 7.69639068371398 NA intron (NM_001168514, intron 2 of 12) intron (NM_001168514, intron 2 of 12) 5791 NM_001168513 26416 Mm.311337 NM_011951 ENSMUSG00000053436 Mapk14 CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha mitogen-activated protein kinase 14 protein-coding common_peak1_55_540_-0.566307722622534_8.79633092251555_7.69573772187437 chr5 122849293 122849994 + 7.69573772187437 NA promoter-TSS (NM_030564) promoter-TSS (NM_030564) -545 NM_030564 80751 Mm.388529 NM_030564 ENSMUSG00000029474 Rnf34 AW061037|AW536122|BC004042|C88279|RIFF ring finger protein 34 protein-coding common_peak2_82_408_0.533548836226599_8.94273145105505_7.69482258028464-2 chr14 47541024 47542641 + 7.69482258028464 NA 3' UTR (NM_172599, exon 10 of 10) 3' UTR (NM_172599, exon 10 of 10) 26602 NM_172599 100504663 Mm.287279 NM_172599 ENSMUSG00000037526 Atg14 4832427M01|Atg14L|D14Ertd114e|D14Ertd436e autophagy related 14 protein-coding common_peak2_82_408_0.533548836226599_8.94273145105505_7.69482258028464 chr1 106561074 106563975 + 7.69482258028464 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -15893 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_170_1767_-0.299269323687973_10.6382678975474_7.69470114170493 chr13 5860278 5861432 + 7.69470114170493 NA promoter-TSS (NM_011803) promoter-TSS (NM_011803) -634 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak1_22_48_1.3237509599783_6.27658532410436_7.69273247822057 chr11 109423568 109424087 + 7.69273247822057 NA Intergenic MTEa|LTR|ERVL-MaLR -2119 NM_025275 13929 Mm.211850 NM_025275 ENSMUSG00000020610 Amz2 AA408420|ESTM12|X83328 archaelysin family metallopeptidase 2 protein-coding common_peak1_22_48_1.3237509599783_6.27658532410436_7.69273247822057-2 chr9 72970318 72970803 + 7.69273247822057 NA intron (NM_026314, intron 7 of 8) intron (NM_026314, intron 7 of 8) 11775 NM_001163725 67685 Mm.31817 NM_026314 ENSMUSG00000089865 Dyx1c1 1700010I24Rik|Dnaaf4|EKN1|b2b811.1Clo|b2b811Clo dyslexia susceptibility 1 candidate 1 protein-coding unique_peak1_22_48_1.3237509599783_6.27658532410436_7.69273247822057 chr1 34831111 34831550 + 7.69273247822057 NA intron (NM_174997, intron 2 of 6) intron (NM_174997, intron 2 of 6) 11720 NM_001160235 214469 Mm.120151 NM_174997 ENSMUSG00000037503 Fam168b mKIAA4042 family with sequence similarity 168, member B protein-coding common_peak1_29_79_1.08672833771034_6.86529226374253_7.69271833540846 chr1 54900899 54901464 + 7.69271833540846 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 25206 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_29_79_1.08672833771034_6.86529226374253_7.69271833540846-2 chr2 132144560 132145102 + 7.69271833540846 NA intron (NM_018824, intron 1 of 15) CpG 277 NM_018824 54338 Mm.103581 NM_018824 ENSMUSG00000027340 Slc23a2 AI844736|NBTL1|SVCT2|Slc23a1|YSPL2|YSPL3|mKIAA0238 solute carrier family 23 (nucleobase transporters), member 2 protein-coding common_peak2_29_79_1.08672833771034_6.86529226374253_7.69271833540846 chr13 43765495 43766153 + 7.69271833540846 NA Intergenic B1_Mur2|SINE|Alu -19288 NM_009856 12522 Mm.57175 NM_009856 ENSMUSG00000015396 Cd83 - CD83 antigen protein-coding common_peak2_84_423_0.523721393289293_8.98978115120785_7.69255814299925 chr17 83821234 83824579 + 7.69255814299925 NA Intergenic Intergenic 23884 NM_025325 107766 Mm.30100 NM_025325 ENSMUSG00000000673 Haao 0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding common_peak2_82_810_-0.454052235048925_9.43653198669281_7.69168447808309 chr2 117416834 117419771 + 7.69168447808309 NA Intergenic Intergenic -75425 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak2_82_810_-0.454052235048925_9.43653198669281_7.69168447808309-2 chr8 69774047 69775229 + 7.69168447808309 NA intron (NM_177899, intron 1 of 3) CpG 273 NM_177899 330788 Mm.41364 NM_177899 ENSMUSG00000043090 Zfp866 9830167H18Rik|AI875089|C85843|D330038O06Rik zinc finger protein 866 protein-coding common_peak2_123_1243_-0.360863943023585_10.1003387986188_7.69004200470194 chr17 14977870 14979686 + 7.69004200470194 NA promoter-TSS (NM_001123368).3 promoter-TSS (NM_001123368).3 34 NM_001123368 100041586 Mm.440445 NM_001123368 ENSMUSG00000079710 Gm3417 - predicted gene 3417 protein-coding common_peak1_267_2098_0.248281871230281_11.1596273869073_7.68990444322238 chr7 142354176 142356512 + 7.68990444322238 NA intron (NM_177265, intron 2 of 3) intron (NM_177265, intron 2 of 3) 16915 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_29_295_-0.800796933031246_7.80905489911333_7.68816623345153 chr2 154372052 154372700 + 7.68816623345153 NA intron (NM_025876, intron 1 of 13) CpG 343 NM_025876 66971 Mm.289427 NM_025876 ENSMUSG00000027487 Cdk5rap1 2310066P17Rik CDK5 regulatory subunit associated protein 1 protein-coding unique_peak2_29_295_-0.800796933031246_7.80905489911333_7.68816623345153 chr6 50595880 50597407 + 7.68816623345153 NA promoter-TSS (NM_027564) promoter-TSS (NM_027564) -53 NM_027564 70821 Mm.157323 NM_027564 ENSMUSG00000029828 4921507P07Rik TISP74 RIKEN cDNA 4921507P07 gene protein-coding common_peak1_113_647_0.431261027851907_9.55548051681058_7.68518054108606 chrX 159255791 159256884 + 7.68518054108606 NA intron (NM_148945, intron 1 of 21) CpG 555 NM_148945 110651 Mm.328476 NM_148945 ENSMUSG00000031309 Rps6ka3 MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2 ribosomal protein S6 kinase polypeptide 3 protein-coding common_peak1_120_1210_-0.365416305058881_10.0592749971649_7.68331232129354 chr15 99251438 99252772 + 7.68331232129354 NA promoter-TSS (NM_016766) promoter-TSS (NM_016766) -144 NM_016766 51812 Mm.383472 NM_016766 ENSMUSG00000037570 Mcrs1 C78274|ICP22BP|MSP58|P78 microspherule protein 1 protein-coding common_peak1_120_704_0.415087397349293_9.6690231459608_7.68309637958519 chr7 120634665 120636038 + 7.68309637958519 NA intron (NM_025899, intron 1 of 13) CpG 162 NM_025899 67003 Mm.334206 NM_025899 ENSMUSG00000030884 Uqcrc2 1500004O06Rik ubiquinol cytochrome c reductase core protein 2 protein-coding common_peak1_96_955_-0.415528444617339_9.69310258567208_7.682588593919 chr13 34162480 34163646 + 7.682588593919 NA promoter-TSS (NM_001101430) promoter-TSS (NM_001101430) 99 NM_001110515 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding common_peak1_51_200_0.73098186464836_8.01654262350311_7.68133547483951 chr14 79301036 79301654 + 7.68133547483951 NA intron (NM_025427, intron 1 of 4) CpG 290 NM_025427 66214 Mm.29811 NM_025427 ENSMUSG00000022018 Rgcc 1190002H23Rik|Rgc-32|Rgc32 regulator of cell cycle protein-coding common_peak2_183_1916_-0.286336884015572_10.7614661796604_7.68008831930835 chr17 26937417 26940527 + 7.68008831930835 NA non-coding (NR_104458, exon 2 of 6) non-coding (NR_104458, exon 2 of 6) 486 NR_104458 67675 Mm.439919 NM_026307 ENSMUSG00000024194 Cuta 0610039D01Rik|1810022E02Rik|1810060C03Rik|2700094G22Rik|AI326454 cutA divalent cation tolerance homolog protein-coding common_peak2_45_164_0.798750901034049_7.76569766476284_7.67843309563759 chr3 159494891 159495835 + 7.67843309563759 NA promoter-TSS (NM_029523) promoter-TSS (NM_029523) -70 NM_001172092 76131 Mm.371655 NM_029523 ENSMUSG00000028175 Depdc1a 5830484J08Rik|Depdc1 DEP domain containing 1a protein-coding common_peak1_373_4274_-0.188178719372242_11.9676193449745_7.67842022972697 chr6 87501151 87504839 + 7.67842022972697 NA intron (NM_001037727, intron 1 of 10) intron (NM_001037727, intron 1 of 10) -6668 NM_175476 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak1_20_40_1.41992263918041_6.06751332420829_7.67743550743227 chr2 166692633 166693069 + 7.67743550743227 NA intron (NR_105783, intron 2 of 2) intron (NR_105783, intron 2 of 2) 20133 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA unique_peak1_20_40_1.41992263918041_6.06751332420829_7.67743550743227 chr1 165813980 165814423 + 7.67743550743227 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 25520 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding unique_peak1_20_40_1.41992263918041_6.06751332420829_7.67743550743227-2 chr6 40435515 40435862 + 7.67743550743227 NA intron (NM_175528, intron 1 of 7) CpG 445 NM_175528 243780 Mm.333006 NM_175528 ENSMUSG00000037172 E330009J07Rik AI841796|Lchn|mKIAA1147 RIKEN cDNA E330009J07 gene protein-coding unique_peak2_7_100_-1.58857053081298_5.8639262173453_7.67728961318995 chr5 112316659 112317579 + 7.67728961318995 NA Intergenic Intergenic -9250 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding common_peak1_132_1341_-0.346268643537822_10.2170346344313_7.67674073942258 chr1 39535521 39536558 + 7.67674073942258 NA exon (NM_028043, exon 1 of 7) exon (NM_028043, exon 1 of 7) 237 NM_028043 52846 Mm.259421 NM_028043 ENSMUSG00000003135 Cnot11 2410015L18Rik|C40|D1Bwg0212e CCR4-NOT transcription complex, subunit 11 protein-coding common_peak2_642_6607_0.142473559876242_12.7612347513576_7.67665235121911 chr1 180385852 180394064 + 7.67665235121911 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -59409 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_128_1297_-0.352212981591906_10.1659681772032_7.67619548479731 chr14 27344510 27346343 + 7.67619548479731 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) 9389 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_71_330_0.587222577438162_8.6642986955263_7.67450536998953 chr10 83647986 83648930 + 7.67450536998953 NA intron (NM_145220, intron 1 of 20) intron (NM_145220, intron 1 of 20) 206 NM_145220 216190 Mm.282985 NM_145220 ENSMUSG00000020263 Appl2 Dip3b adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 protein-coding common_peak2_58_570_-0.551820530321018_8.88143667020233_7.6733065887553 chr8 69188173 69190368 + 7.6733065887553 NA Intergenic Intergenic -19776 NM_001013379 234358 Mm.334577 NM_001013379 ENSMUSG00000059897 Zfp930 - zinc finger protein 930 protein-coding common_peak2_44_158_0.813295682280276_7.71953079642449_7.67214259688178 chr11 78212731 78213861 + 7.67214259688178 NA exon (NM_009297, exon 29 of 37) exon (NM_009297, exon 29 of 37) 19904 NM_001045516 216974 Mm.50974 NM_001045516 ENSMUSG00000044122 Proca1 4933404M19Rik protein interacting with cyclin A1 protein-coding common_peak2_186_1950_-0.283080388507003_10.7884578683555_7.67176087081286 chr1 166014968 166018631 + 7.67176087081286 NA Intergenic B1_Mur2|SINE|Alu -14165 NM_011137 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding common_peak2_166_1105_0.335610935453252_10.2789411379613_7.67006727549264 chr19 6868767 6872674 + 7.67006727549264 NA Intergenic RMER4A|LTR|ERVK -12509 NM_001081291 78317 Mm.329596 NM_198008 ENSMUSG00000047810 Ccdc88b 2610041P08Rik|Ccdc88 coiled-coil domain containing 88B protein-coding common_peak1_26_267_-0.843881623618177_7.64414837864868_7.66994342892566 chr5 121838334 121838951 + 7.66994342892566 NA Intergenic Intergenic -1783 NM_001306127 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding unique_peak2_26_267_-0.843881623618177_7.64414837864868_7.66994342892566 chr5 141018068 141019315 + 7.66994342892566 NA Intergenic Intergenic -18095 NM_175362 108723 Mm.46187 NM_175362 ENSMUSG00000036526 Card11 0610008L17Rik|2410011D02Rik|BIMP3|CARMA1 caspase recruitment domain family, member 11 protein-coding common_peak2_85_840_-0.443622508814839_9.49415073584773_7.66977160492587 chr9 69033315 69035630 + 7.66977160492587 NA intron (NM_013646, intron 1 of 10) intron (NM_013646, intron 1 of 10) -255369 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding common_peak1_30_304_-0.785983227715942_7.85967381859228_7.66951373732685 chr12 69574282 69574900 + 7.66951373732685 NA Intergenic Intergenic 8437 NM_001033236 207965 Mm.102487 NM_001033236 ENSMUSG00000049882 Vcpkmt Gm71|Mettl21d|Mettl221d|VCP-KMT valosin containing protein lysine (K) methyltransferase protein-coding common_peak1_30_304_-0.785983227715942_7.85967381859228_7.66951373732685-2 chr19 9981960 9982562 + 7.66951373732685 NA promoter-TSS (NM_010239) promoter-TSS (NM_010239) -385 NM_010239 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding unique_peak2_30_304_-0.785983227715942_7.85967381859228_7.66951373732685 chr16 57422337 57424247 + 7.66951373732685 NA intron (NM_001040397, intron 1 of 4) RMER17C|LTR|ERVK 70015 NM_001040397 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_87_445_0.512122465146359_9.05696113249348_7.66781058380509 chr15 27674220 27676029 + 7.66781058380509 NA intron (NM_001242424, intron 1 of 8) intron (NM_001242424, intron 1 of 8) 6418 NM_001242424 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_58_244_0.668888466039254_8.2710821720222_7.66777211659436 chr11 54951967 54953044 + 7.66777211659436 NA intron (NM_001271455, intron 1 of 17) L2a|LINE|L2 10435 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak1_14_161_-1.15780588147328_6.76094706214799_7.66707317698319 chr12 71040188 71040580 + 7.66707317698319 NA intron (NM_001081195, intron 8 of 23) B1F|SINE|Alu 24417 NM_001081195 238247 Mm.241601 NM_001081195 ENSMUSG00000048118 Arid4a A630009N03|A630067N03Rik|MmRBBP1|Rbbp1 AT rich interactive domain 4A (RBP1-like) protein-coding common_peak2_316_2624_0.222813250818003_11.4695083328498_7.66703925148806 chr1 59912173 59914842 + 7.66703925148806 NA exon (NM_001037725, exon 1 of 8) exon (NM_001037725, exon 1 of 8) 501 NM_001037725 72750 Mm.258250 NM_001037725 ENSMUSG00000041040 Fam117b 2810425F24Rik|6330416D14Rik|Als2cr13 family with sequence similarity 117, member B protein-coding common_peak1_202_1443_0.296344396890868_10.6440272253326_7.66701515362038 chr9 69988960 69990236 + 7.66701515362038 NA 5' UTR (NM_001008238, exon 1 of 10) 5' UTR (NM_001008238, exon 1 of 10) 132 NM_001008238 12175 Mm.159777 NM_016787 ENSMUSG00000011958 Bnip2 5730523P12Rik|BNIP2beta|Nip21 BCL2/adenovirus E1B interacting protein 2 protein-coding unique_peak2_23_240_-0.899113868137867_7.46333240216103_7.66513992236844 chr11 120720713 120722179 + 7.66513992236844 NA promoter-TSS (NM_133223) promoter-TSS (NM_133223) -22 NM_133223 170758 Mm.34008 NM_133223 ENSMUSG00000018012 Rac3 Rac1B RAS-related C3 botulinum substrate 3 protein-coding common_peak1_23_240_-0.899113868137867_7.46333240216103_7.66513992236844 chr11 88145493 88146167 + 7.66513992236844 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) -23735 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak1_25_61_1.20122493425406_6.5548087775139_7.66476824939343-2 chr17 78400012 78400600 + 7.66476824939343 NA intron (NM_001285940, intron 5 of 8) intron (NM_001285940, intron 5 of 8) 17846 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_25_61_1.20122493425406_6.5548087775139_7.66476824939343 chr13 51741684 51742193 + 7.66476824939343 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 51809 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_12_143_-1.24111606798774_6.54936696744844_7.66476824939342 chr6 130387380 130387746 + 7.66476824939342 NA promoter-TSS (NM_016659) promoter-TSS (NM_016659) -689 NM_016659 16627 Mm.24399 NM_016659 ENSMUSG00000079853 Klra1 A1|CH29-493D4.3|Klra22|Ly49a|Ly49o<129>|Ly49v killer cell lectin-like receptor, subfamily A, member 1 protein-coding common_peak2_63_618_-0.524317713716384_9.01163674235607_7.66415474082832 chr11 83290879 83292670 + 7.66415474082832 NA promoter-TSS (NR_028363) promoter-TSS (NR_028363) 75 NR_028363 613254 Mm.383758 NR_028363 ENSMUSG00000093483 AA465934 - expressed sequence AA465934 ncRNA common_peak1_609_6173_0.147247581496522_12.6656135583634_7.66313281234432 chr3 96486051 96489493 + 7.66313281234432 NA Intergenic B1_Mus1|SINE|Alu -35466 NM_001256180 329716 Mm.275223 NM_183223 ENSMUSG00000046317 BC107364 D730018G16 cDNA sequence BC107364 protein-coding common_peak2_121_713_0.41135149820423_9.68545601313121_7.66036214158993 chr12 102620825 102623946 + 7.66036214158993 NA intron (NM_172584, intron 3 of 9) intron (NM_172584, intron 3 of 9) 62635 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_364_3162_0.203346772746555_11.7287512268907_7.66027548649225 chr19 6045506 6047941 + 7.66027548649225 NA promoter-TSS (NM_001164709) promoter-TSS (NM_001164709) 147 NM_028769 74126 Mm.149870 NM_028769 ENSMUSG00000024807 Syvn1 1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1 synovial apoptosis inhibitor 1, synoviolin protein-coding common_peak1_50_194_0.740340463377846_7.97750054543853_7.65736227945064 chr5 139793776 139794765 + 7.65736227945064 NA intron (NM_010757, intron 1 of 2) intron (NM_010757, intron 1 of 2) 2734 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding unique_peak1_26_65_1.17781344748114_6.63330084309902_7.65702374624356 chr2 44957446 44958063 + 7.65702374624356 NA Intergenic Intergenic 65423 NR_039591 100628598 NR_039591 ENSMUSG00000092679 Mir5129 mir-5129|mmu-mir-5129|mu-mir-5129 microRNA 5129 ncRNA unique_peak2_13_152_-1.19743540386108_6.65867014076211_7.6565750446507 chr12 31296148 31297142 + 7.6565750446507 NA intron (NM_008482, intron 12 of 32) intron (NM_008482, intron 12 of 32) 31351 NM_008482 16777 Mm.172674 NM_008482 ENSMUSG00000002900 Lamb1 C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1 laminin B1 protein-coding unique_peak2_53_520_-0.576319684252557_8.73697972015223_7.655723192622 chr11 116135500 116137615 + 7.655723192622 NA intron (NM_024177, intron 2 of 8) B4A|SINE|B4 2311 NM_024177 60441 Mm.29974 NM_024177 ENSMUSG00000020775 Mrpl38 1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3 mitochondrial ribosomal protein L38 protein-coding common_peak1_31_313_-0.771755174580104_7.90874316160158_7.65566972598951 chr8 57353658 57354322 + 7.65566972598951 NA non-coding (NR_131041, exon 3 of 3) non-coding (NR_131041, exon 3 of 3) 21555 NR_131041 75996 Mm.399754 NR_131041 ENSMUSG00000097910 5033428I22Rik - RIKEN cDNA 5033428I22 gene ncRNA common_peak2_31_313_-0.771755174580104_7.90874316160158_7.65566972598951 chr6 116673517 116674914 + 7.65566972598951 NA promoter-TSS (NM_178045) promoter-TSS (NM_178045) -379 NM_178045 213391 Mm.257931 NM_178045 ENSMUSG00000042129 Rassf4 3830411C14Rik|AD037|AI586137 Ras association (RalGDS/AF-6) domain family member 4 protein-coding common_peak1_189_1319_0.308759887215752_10.5207021578537_7.65546485877828 chr9 97110176 97111871 + 7.65546485877828 NA promoter-TSS (NM_138756) promoter-TSS (NM_138756) 18 NM_138756 192287 Mm.228067 NM_138756 ENSMUSG00000032449 Slc25a36 C330005L02Rik solute carrier family 25, member 36 protein-coding unique_peak1_10_8_2.46326043006528_4.40155521647495_7.65516623026102 chr12 54969864 54970171 + 7.65516623026102 NA intron (NM_013815, intron 3 of 26) B1_Mus1|SINE|Alu 16319 NM_013815 217578 Mm.479583 NM_013815 ENSMUSG00000035021 Baz1a Acf1|B930060C03|BC065123|Gtl5|Wcrf180|cbp146 bromodomain adjacent to zinc finger domain 1A protein-coding common_peak1_68_668_-0.503267080394666_9.13422886044413_7.65499481797718 chr3 51275079 51276169 + 7.65499481797718 NA intron (NM_001291059, intron 4 of 9) intron (NM_001291059, intron 4 of 9) -1137 NR_073429 67746 Mm.441177 NR_073429 ENSMUSG00000087440 4930577N17Rik - RIKEN cDNA 4930577N17 gene ncRNA common_peak1_42_415_-0.654712547887142_8.37308344419752_7.65421714420015 chr6 128785685 128786344 + 7.65421714420015 NA exon (NM_008527, exon 2 of 6) exon (NM_008527, exon 2 of 6) 2627 NM_008527 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak2_77_759_-0.470299847536729_9.33470568456258_7.6540601952921 chr4 129695624 129697581 + 7.6540601952921 NA intron (NM_199305, intron 1 of 8) CpG 236 NM_199305 230770 Mm.257157 NM_199305 ENSMUSG00000053730 Tmem39b 6330509E05Rik|BC037095 transmembrane protein 39b protein-coding common_peak1_81_401_0.537003885072854_8.91955363371536_7.65302971777963 chr3 88566258 88567952 + 7.65302971777963 NA intron (NM_033526, intron 10 of 10) intron (NM_033526, intron 10 of 10) -12566 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak1_19_204_-0.98834587187467_7.18530716356811_7.65254569252609 chr14 54398589 54399035 + 7.65254569252609 NA intron (NM_011405, intron 4 of 11) Tigger15a|DNA|TcMar-Tigger 10660 NM_001253680 20540 Mm.142455 NM_011405 ENSMUSG00000000958 Slc7a7 AI790233|my+lat1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 protein-coding common_peak1_19_204_-0.98834587187467_7.18530716356811_7.65254569252609-2 chr15 62169346 62169834 + 7.65254569252609 NA intron (NR_003368, intron 4 of 8) intron (NR_003368, intron 4 of 8) 49861 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_473_4452_0.172284022010052_12.2067039074479_7.65117750134794 chr17 71484766 71487579 + 7.65117750134794 NA Intergenic Intergenic -10829 NM_028887 74355 Mm.194450 NM_028887 ENSMUSG00000024054 Smchd1 4931400A14Rik|AW554188|MommeD1|mKIAA0650 SMC hinge domain containing 1 protein-coding common_peak2_191_1338_0.306672156326853_10.5402763234877_7.64915007563232 chr15 89354723 89356787 + 7.64915007563232 NA promoter-TSS (NM_001115132) promoter-TSS (NM_001115132) 36 NM_001271601 52683 Mm.143167 NM_001115132 ENSMUSG00000008690 Ncaph2 - non-SMC condensin II complex, subunit H2 protein-coding common_peak2_95_944_-0.417170428643628_9.67558530478662_7.64710088412656 chr7 127243389 127245139 + 7.64710088412656 NA promoter-TSS (NM_177362) promoter-TSS (NM_177362) -262 NM_177362 244216 Mm.41038 NM_177362 ENSMUSG00000054716 Zfp771 G630024C07Rik|Znf771 zinc finger protein 771 protein-coding common_peak1_100_544_0.466735773941169_9.32348030663487_7.64620390573311 chr11 53839165 53841056 + 7.64620390573311 NA intron (NR_033332, intron 2 of 3) intron (NR_033332, intron 2 of 3) 19146 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA unique_peak2_4_73_-1.97154376037089_5.22368148544351_7.64619668785618 chr15 103323644 103324197 + 7.64619668785618 NA intron (NM_013866, intron 2 of 7) intron (NM_013866, intron 2 of 7) -13482 NM_030720 80910 Mm.160369 NM_030720 ENSMUSG00000063234 Gpr84 EX33 G protein-coupled receptor 84 protein-coding unique_peak2_4_73_-1.97154376037089_5.22368148544351_7.64619668785618-2 chr8 55547349 55547997 + 7.64619668785618 NA Intergenic IAPEz-int|LTR|ERVK 359291 NM_175939 244486 Mm.67684 NM_175939 ENSMUSG00000046258 Adam29 - a disintegrin and metallopeptidase domain 29 protein-coding unique_peak1_14_19_1.86011602652399_5.25198610814935_7.64619668785617 chr5 75667009 75667414 + 7.64619668785617 NA Intergenic Intergenic 92220 NM_021099 16590 Mm.247073 NM_021099 ENSMUSG00000005672 Kit Bs|CD117|Fdc|Gsfsco1|Gsfsco5|Gsfsow3|SCO1|SCO5|SOW3|Ssm|Tr-kit|W|c-KIT KIT proto-oncogene receptor tyrosine kinase protein-coding unique_peak1_14_19_1.86011602652399_5.25198610814935_7.64619668785617-3 chr8 77491569 77491965 + 7.64619668785617 NA intron (NM_030113, intron 1 of 22) RMER1B|Other|Other -25289 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA unique_peak1_14_19_1.86011602652399_5.25198610814935_7.64619668785617-2 chr6 53566816 53567213 + 7.64619668785617 NA Intergenic Intergenic -6360 NM_172728 231991 Mm.227444 NM_172728 ENSMUSG00000053007 Creb5 9430076C15Rik|CRE-BPa|Crebpa|D430026C09Rik cAMP responsive element binding protein 5 protein-coding common_peak1_32_322_-0.758070407033045_7.9563551511774_7.64617329929831 chr6 129582425 129583097 + 7.64617329929831 NA intron (NM_153590, intron 4 of 6) (CAA)n|Simple_repeat|Simple_repeat 4475 NM_153590 243655 Mm.30968 NM_153590 ENSMUSG00000050241 Klre1 Klre-1|NKG2I killer cell lectin-like receptor family E member 1 protein-coding unique_peak2_32_322_-0.758070407033045_7.9563551511774_7.64617329929831 chr9 66559085 66561562 + 7.64617329929831 NA intron (NM_001302122, intron 1 of 12) intron (NM_001302122, intron 1 of 12) 32792 NM_144937 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding unique_peak1_23_52_1.2858550135289_6.37084796132765_7.64588365713483 chr1 151457171 151457710 + 7.64588365713483 NA intron (NM_026876, intron 13 of 14) intron (NM_026876, intron 13 of 14) 15047 NR_106150 102466847 NR_106150 ENSMUSG00000106406 Mir7682 mmu-mir-7682 microRNA 7682 ncRNA common_peak2_511_4922_0.163992794822079_12.3473184216459_7.64523111270119 chr3 58413899 58418007 + 7.64523111270119 NA exon (NM_001081229, exon 1 of 4) exon (NM_001081229, exon 1 of 4) 264 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak2_405_3637_0.189881907312909_11.9238707813079_7.64504316335165 chr6 42348327 42355584 + 7.64504316335165 NA exon (NM_001289617, exon 5 of 11) exon (NM_001289617, exon 5 of 11) 2127 NM_001289619 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak2_140_1428_-0.333524597516513_10.3140279023376_7.64324368183123 chrX 103979775 103982204 + 7.64324368183123 NA intron (NM_011276, intron 1 of 4) CpG 295 NM_011276 19820 Mm.427762 NM_011276 ENSMUSG00000056537 Rlim AL022832|AW743871|Ha1r|Rlim1|Rnf12 ring finger protein, LIM domain interacting protein-coding unique_peak2_21_222_-0.941102157226354_7.33034882130713_7.64281091460654 chr19 45176516 45177231 + 7.64281091460654 NA Intergenic Intergenic 26158 NM_021901 21908 Mm.391203 NM_021901 ENSMUSG00000025215 Tlx1 Hox-11|Hox11|Tlx-1 T cell leukemia, homeobox 1 protein-coding common_peak2_68_310_0.601824550116191_8.5816830451887_7.64155415600985 chr4 43669012 43669882 + 7.64155415600985 NA promoter-TSS (NM_175517) promoter-TSS (NM_175517) 476 NM_001085508 242409 Mm.171489 NM_001085508 ENSMUSG00000078716 Tmem8b 4930500O05Rik transmembrane protein 8B protein-coding unique_peak1_12_13_2.12145401139697_4.86808192775609_7.640485930352-2 chr13 43211654 43212036 + 7.640485930352 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -40344 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding unique_peak1_12_13_2.12145401139697_4.86808192775609_7.640485930352 chr12 102662632 102663022 + 7.640485930352 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 22193 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA unique_peak1_12_13_2.12145401139697_4.86808192775609_7.640485930352-3 chr19 23353074 23353468 + 7.640485930352 NA intron (NM_174857, intron 8 of 13) intron (NM_174857, intron 8 of 13) -79374 NM_001252684 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding common_peak1_35_349_-0.719913438773306_8.09125439244568_7.63996892410002-2 chr18 34958536 34959284 + 7.63996892410002 NA Intergenic Intergenic -4559 NM_010481 15526 Mm.209419 NM_010481 ENSMUSG00000024359 Hspa9 74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74 heat shock protein 9 protein-coding common_peak1_35_349_-0.719913438773306_8.09125439244568_7.63996892410002 chr17 45563677 45564314 + 7.63996892410002 NA promoter-TSS (NM_028662) promoter-TSS (NM_028662) -157 NM_028662 73836 Mm.289716 NM_028662 ENSMUSG00000037089 Slc35b2 1110003M08Rik|AA407792|AI842275|PAPST1|Slc35b1 solute carrier family 35, member B2 protein-coding common_peak1_156_1015_0.348790947633484_10.1630801605889_7.63941533549674 chr2 120608589 120609998 + 7.63941533549674 NA promoter-TSS (NM_025475) promoter-TSS (NM_025475) 22 NM_025657 66606 Mm.428639 NM_025657 ENSMUSG00000027286 Lrrc57 2810002D13Rik|AA407405 leucine rich repeat containing 57 protein-coding common_peak2_109_615_0.44111678887737_9.48734493513359_7.63878239784478 chr1 183368722 183370361 + 7.63878239784478 NA promoter-TSS (NM_177389) promoter-TSS (NM_177389) 24 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding common_peak1_34_340_-0.732182214500639_8.04753682177385_7.63865720256017 chr7 78719465 78720212 + 7.63865720256017 NA Intergenic Intergenic -1618 NR_015542 414121 Mm.482537 NR_015542 ENSMUSG00000059146 E430016F16Rik - RIKEN cDNA E430016F16 gene ncRNA common_peak2_151_1551_-0.319711705231169_10.4400569895715_7.63815428503875 chr6 54924438 54928298 + 7.63815428503875 NA intron (NM_172729, intron 11 of 11) MTEa|LTR|ERVL-MaLR 45293 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak1_38_377_-0.689298974613211_8.21759293691447_7.63637754971314 chr1 80664738 80665361 + 7.63637754971314 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 303 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak2_174_1811_-0.29381593864438_10.676459270724_7.63473290772351 chr3 36853222 36855335 + 7.63473290772351 NA Intergenic Intergenic -8828 NM_172679 229227 Mm.207907 NM_172679 ENSMUSG00000037270 4932438A13Rik 4732443H21|B830039D19Rik|D630029K19Rik|FSA|Kiaa1109|Tweek RIKEN cDNA 4932438A13 gene protein-coding common_peak2_42_147_0.836273804625001_7.62759026794145_7.63445432411305 chr9 65826823 65827789 + 7.63445432411305 NA intron (NM_172536, intron 1 of 9) C-rich|Low_complexity|Low_complexity 258 NM_172536 214812 Mm.139231 NM_172536 ENSMUSG00000040524 Zfp609 9830165N24|BC016271|Znf609|mKIAA0295 zinc finger protein 609 protein-coding common_peak1_255_2773_-0.235049564453011_11.3202272900971_7.63434907751373 chr6 87494623 87497100 + 7.63434907751373 NA intron (NM_001286610, intron 1 of 9) intron (NM_001286610, intron 1 of 9) 466 NR_104483 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak1_43_153_0.819623513185406_7.6765982972876_7.63401369386824 chr17 34893836 34894755 + 7.63401369386824 NA promoter-TSS (NM_198886) promoter-TSS (NM_198886) -264 NM_198886 193736 Mm.161119 NM_198886 ENSMUSG00000049823 Zbtb12 BC020447|Bat-9|Bat9|G10|NG35 zinc finger and BTB domain containing 12 protein-coding common_peak2_43_153_0.819623513185406_7.6765982972876_7.63401369386824 chr7 79920203 79921238 + 7.63401369386824 NA promoter-TSS (NM_009682) promoter-TSS (NM_009682) -80 NM_009682 11778 Mm.220173 NM_009682 ENSMUSG00000063801 Ap3s2 [s]3B adaptor-related protein complex 3, sigma 2 subunit protein-coding common_peak1_31_89_1.03101247798185_7.0073593353206_7.63200619495637 chr11 50827226 50828082 + 7.63200619495637 NA promoter-TSS (NM_013922) promoter-TSS (NM_013922) 77 NM_013922 30944 Mm.103674 NM_013922 ENSMUSG00000044807 Zfp354c 5330421P20Rik|AJ18|AW743325|Kid3|Tcf17l2|Znf354c|mKIAA4218 zinc finger protein 354C protein-coding common_peak1_31_89_1.03101247798185_7.0073593353206_7.63200619495637-2 chr3 28264622 28265387 + 7.63200619495637 NA intron (NM_001163007, intron 1 of 31) intron (NM_001163007, intron 1 of 31) 1790 NM_001163009 665113 Mm.126193 NM_026910 ENSMUSG00000027692 Tnik 1500031A17Rik|4831440I19Rik|AI451411|C530008O15Rik|C630040K21Rik TRAF2 and NCK interacting kinase protein-coding common_peak2_124_1252_-0.357049920307157_10.1126457391683_7.63009546197878 chr19 60889287 60891120 + 7.63009546197878 NA 5' UTR (NM_018869, exon 1 of 16) 5' UTR (NM_018869, exon 1 of 16) 454 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak2_37_368_-0.70050049147715_8.17722676032182_7.62614966193906 chr18 5989325 5990242 + 7.62614966193906 NA Intergenic Intergenic 146315 NM_029277 75415 Mm.239675 NM_029277 ENSMUSG00000041225 Arhgap12 2810011M08Rik Rho GTPase activating protein 12 protein-coding common_peak1_37_368_-0.70050049147715_8.17722676032182_7.62614966193906 chr7 30410067 30410509 + 7.62614966193906 NA Intergenic Intergenic -3500 NM_011662 22177 Mm.46301 NM_011662 ENSMUSG00000030579 Tyrobp DAP12|KARAP|Ly83 TYRO protein tyrosine kinase binding protein protein-coding common_peak2_123_730_0.406179231154582_9.71681721152973_7.62586978038355 chr12 100479969 100482142 + 7.62586978038355 NA intron (NM_001033213, intron 3 of 19) intron (NM_001033213, intron 3 of 19) 39767 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak2_123_730_0.406179231154582_9.71681721152973_7.62586978038355-2 chr16 31199980 31201892 + 7.62586978038355 NA intron (NM_030138, intron 1 of 22) CpG 302 NM_030138 78618 Mm.274646 NM_030138 ENSMUSG00000049076 Acap2 4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding common_peak2_39_387_-0.682166303369995_8.25882969050213_7.62510331281703 chr2 154372057 154373397 + 7.62510331281703 NA promoter-TSS (NM_025876) promoter-TSS (NM_025876) -8 NM_025876 66971 Mm.289427 NM_025876 ENSMUSG00000027487 Cdk5rap1 2310066P17Rik CDK5 regulatory subunit associated protein 1 protein-coding common_peak1_80_789_-0.459366760071587_9.39602546302867_7.62190919299686 chr4 21775850 21777012 + 7.62190919299686 NA intron (NM_152825, intron 1 of 17) CpG 161 NM_152825 77593 Mm.154306 NM_152825 ENSMUSG00000040455 Usp45 3110003C05Rik|4930550B20Rik|AI843191|Gcap7 ubiquitin specific petidase 45 protein-coding common_peak1_419_4883_-0.175042631937872_12.1663261690185_7.62113550146771 chr11 118142612 118145794 + 7.62113550146771 NA Intergenic Intergenic -14984 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak2_208_2207_-0.264778840253426_10.9761350366515_7.62071624147167 chr15 100598095 100601201 + 7.62071624147167 NA intron (NM_001304965, intron 1 of 10) CpG 336 NM_001304965 19009 Mm.28825 NM_010127 ENSMUSG00000009739 Pou6f1 2310038G18Rik|C79593|Emb|cns-1 POU domain, class 6, transcription factor 1 protein-coding common_peak2_65_290_0.619056915938954_8.49440380087776_7.61948047857005 chr1 171684344 171686808 + 7.61948047857005 NA intron (NM_007649, intron 1 of 3) ID_B1|SINE|B4 3521 NM_007649 12506 Mm.1738 NM_007649 ENSMUSG00000015355 Cd48 AI449234|AW610730|BCM1|BLAST|BLAST-1|BLAST1|Bcm-1|MEM-102|SLAMF2|Sgp-60 CD48 antigen protein-coding common_peak1_55_539_-0.56363853584655_8.79499632912756_7.61912488844002-2 chr8 84831717 84832593 + 7.61912488844002 NA promoter-TSS (NM_183358) promoter-TSS (NM_183358) 110 NR_033145 23863 Mm.304252 NM_201227 ENSMUSG00000053226 Dand5 Cerl-2|Cerr2|Dte|GREM3|coco DAN domain family member 5, BMP antagonist protein-coding common_peak1_55_539_-0.56363853584655_8.79499632912756_7.61912488844002 chr11 43747270 43748062 + 7.61912488844002 NA intron (NM_133795, intron 1 of 7) intron (NM_133795, intron 1 of 7) 307 NM_133795 66827 Mm.271974 NM_133795 ENSMUSG00000041278 Ttc1 4833412C19Rik|C79328|TPR1 tetratricopeptide repeat domain 1 protein-coding common_peak1_36_359_-0.712069445118264_8.13581837377054_7.61840590742548 chr14 79529455 79530148 + 7.61840590742548 NA intron (NM_001286411, intron 1 of 8) B3|SINE|B2 14127 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding unique_peak2_36_359_-0.712069445118264_8.13581837377054_7.61840590742548 chr6 131352560 131354443 + 7.61840590742548 NA Intergenic Intergenic 34949 NM_139117 56449 Mm.458000 NM_011733 ENSMUSG00000030189 Ybx3 Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR Y box protein 3 protein-coding unique_peak2_8_108_-1.49011127409061_6.02312868773162_7.61807641691138 chr4 138221711 138222767 + 7.61807641691138 NA intron (NM_001285480, intron 2 of 11) intron (NM_001285480, intron 2 of 11) 5112 NM_001122897 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding common_peak1_152_980_0.353695967061501_10.11495730975_7.61690619838952 chr6 130155120 130158276 + 7.61690619838952 NA intron (NR_104106, intron 3 of 5) ID_B1|SINE|B4 4050 NR_104106 654449 Mm.439698 NM_008461 ENSMUSG00000072721 Klra14-ps EG654449|Gm15858|Klra14|Klra29|Klra31|Ly49N|OTTMUSG00000026959 killer cell lectin-like receptor subfamily A, member 14, pseudogene pseudo unique_peak1_13_16_1.97248959758123_5.07370764004095_7.61596947201042 chr7 80091603 80091938 + 7.61596947201042 NA 3' UTR (NM_001146000, exon 6 of 6) 3' UTR (NM_001146000, exon 6 of 6) -16513 NR_045695 100859962 Mm.392575 NR_045695 ENSMUSG00000108714 Gm21057 - predicted gene, 21057 ncRNA unique_peak1_32_94_1.00746433932993_7.07358777799591_7.61518504016082 chr13 9776000 9776733 + 7.61518504016082 NA Intergenic B3|SINE|B2 -11052 NM_144516 66505 Mm.397307 NM_144516 ENSMUSG00000021156 Zmynd11 2210402G22Rik|BS69 zinc finger, MYND domain containing 11 protein-coding common_peak1_32_94_1.00746433932993_7.07358777799591_7.61518504016082 chr7 45075454 45076228 + 7.61518504016082 NA intron (NM_001163684, intron 4 of 8) ID_B1|SINE|B4 13412 NM_025533 66394 Mm.272139 NM_025533 ENSMUSG00000003421 Nosip 2310061K06Rik|CGI-25 nitric oxide synthase interacting protein protein-coding common_peak1_19_36_1.48168086200183_5.95029379662986_7.61426632989323 chr2 150829505 150829971 + 7.61426632989323 NA intron (NM_153781, intron 19 of 19) intron (NM_153781, intron 19 of 19) 42942 NM_153781 110078 Mm.222584 NM_153781 ENSMUSG00000033059 Pygb - brain glycogen phosphorylase protein-coding unique_peak1_19_36_1.48168086200183_5.95029379662986_7.61426632989323-2 chr4 143188796 143189181 + 7.61426632989323 NA intron (NM_001081355, intron 2 of 9) intron (NM_001081355, intron 2 of 9) 23721 NM_001081355 110593 Mm.332020 NM_001081355 ENSMUSG00000057637 Prdm2 4833427P12Rik|E330024L24Rik|Gm1033|Gm19732|KMT8|Riz|Riz1|Znfpr1c1 PR domain containing 2, with ZNF domain protein-coding unique_peak1_19_36_1.48168086200183_5.95029379662986_7.61426632989323 chr19 34551599 34552079 + 7.61426632989323 NA intron (NM_008332, intron 1 of 2) intron (NM_008332, intron 1 of 2) 1145 NM_008332 15958 Mm.2036 NM_008332 ENSMUSG00000045932 Ifit2 AV302338|Ifi54|P54 interferon-induced protein with tetratricopeptide repeats 2 protein-coding common_peak1_111_1112_-0.380448504951323_9.9300136248663_7.61340701556299 chr5 21247314 21249053 + 7.61340701556299 NA intron (NM_175437, intron 14 of 30) intron (NM_175437, intron 14 of 30) 61916 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_72_338_0.577177563249284_8.69373024476099_7.61132759879677 chr12 100836833 100838059 + 7.61132759879677 NA intron (NM_145448, intron 3 of 12) ORR1F|LTR|ERVL-MaLR 58323 NM_145448 217830 Mm.218590 NM_145448 ENSMUSG00000021185 9030617O03Rik - RIKEN cDNA 9030617O03 gene protein-coding common_peak1_108_1080_-0.386408572205013_9.88494652163214_7.61117241400463 chr14 60265174 60266138 + 7.61117241400463 NA intron (NM_144843, intron 1 of 13) intron (NM_144843, intron 1 of 13) 451 NM_144843 219135 Mm.247007 NM_144843 ENSMUSG00000021987 Mtmr6 4022440C11Rik|AI428804|AU041072 myotubularin related protein 6 protein-coding common_peak2_155_1595_-0.314076864241772_10.4832065041015_7.61042119338166 chr2 181519727 181521586 + 7.61042119338166 NA non-coding (NR_073369, exon 1 of 6) non-coding (NR_073369, exon 1 of 6) 171 NM_001271584 13002 Mm.140761 NM_016775 ENSMUSG00000000826 Dnajc5 2610314I24Rik|AU018536|Csp DnaJ heat shock protein family (Hsp40) member C5 protein-coding common_peak2_24_249_-0.879769092525703_7.52589973839924_7.6101264307117 chr3 96238393 96239114 + 7.6101264307117 NA exon (NM_178216, exon 1 of 1).2 exon (NM_178216, exon 1 of 1).2 374 NM_054045 97114 Mm.358797 NM_054045 ENSMUSG00000081058 Hist2h3c2 H3-614|H3.2-614|Hist2h3c2-ps|Hist2h3ca1|M32461 histone cluster 2, H3c2 protein-coding common_peak1_40_136_0.863411182104899_7.52973767401298_7.6101264307117 chr10 118476784 118477614 + 7.6101264307117 NA Intergenic MLT1A|LTR|ERVL-MaLR 36153 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak2_24_249_-0.879769092525703_7.52589973839924_7.6101264307117-2 chr6 29767487 29768332 + 7.6101264307117 NA promoter-TSS (NM_021414) promoter-TSS (NM_021414) -534 NM_021414 74340 Mm.210899 NM_021414 ENSMUSG00000029772 Ahcyl2 4631427C17Rik|AI227036|Adohcyase3|mKIAA0828 S-adenosylhomocysteine hydrolase-like 2 protein-coding common_peak1_24_249_-0.879769092525703_7.52589973839924_7.6101264307117 chr2 117442722 117443363 + 7.6101264307117 NA Intergenic Intergenic -100165 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak2_64_628_-0.520001686546392_9.03691536360609_7.60918049647289 chr12 108760546 108762222 + 7.60918049647289 NA Intergenic Intergenic -31927 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak2_85_839_-0.441906036225818_9.49329249955321_7.60832948937686-2 chr16 57120860 57122570 + 7.60832948937686 NA promoter-TSS (NM_138599) promoter-TSS (NM_138599) 1 NM_138599 28185 Mm.196933 NM_138599 ENSMUSG00000022752 Tomm70a 2610044B22Rik|D16Ium22|D16Ium22e|D16Wsu109e|Tom70|Tomm70|mKIAA0719 translocase of outer mitochondrial membrane 70 homolog A (yeast) protein-coding common_peak2_85_839_-0.441906036225818_9.49329249955321_7.60832948937686 chr11 40754306 40756113 + 7.60832948937686 NA promoter-TSS (NM_009831) promoter-TSS (NM_009831) 77 NM_009831 12450 Mm.2103 NM_009831 ENSMUSG00000020326 Ccng1 AI314029 cyclin G1 protein-coding common_peak2_107_600_0.444211008501121_9.45332668496175_7.60762113940424 chr12 25387906 25391441 + 7.60762113940424 NA Intergenic Intergenic 260499 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_107_600_0.444211008501121_9.45332668496175_7.60762113940424-2 chr17 6475812 6477632 + 7.60762113940424 NA Intergenic CpG -25728 NR_033520 547127 Mm.297552 NM_001045538 Tmem181b-ps Tmem181b transmembrane protein 181B, pseudogene pseudo common_peak2_35_109_0.949937959534363_7.25632869329184_7.60623399426123 chr6 112853613 112854513 + 7.60623399426123 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 93203 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak1_35_109_0.949937959534363_7.25632869329184_7.60623399426123 chr11 78887062 78887895 + 7.60623399426123 NA Intergenic Intergenic -33309 NM_010927 18126 Mm.2893 NM_010927 ENSMUSG00000020826 Nos2 MAC-NOS|NOS-II|Nos-2|Nos2a|i-NOS|iNOS nitric oxide synthase 2, inducible protein-coding common_peak1_33_99_0.986292382385803_7.13700238096763_7.60586519759489-2 chr13 52551005 52551709 + 7.60586519759489 NA Intergenic Intergenic -20521 NM_001024474 68203 Mm.29362 NM_001024474 ENSMUSG00000047842 Diras2 2900052J15Rik|AI414999 DIRAS family, GTP-binding RAS-like 2 protein-coding common_peak1_33_99_0.986292382385803_7.13700238096763_7.60586519759489 chr10 60282051 60282870 + 7.60586519759489 NA intron (NM_001146120, intron 1 of 13) intron (NM_001146120, intron 1 of 13) -2001 NM_001146124 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding common_peak2_445_4114_0.178419469831772_12.0958864502249_7.6053975561476 chr9 118080962 118085051 + 7.6053975561476 NA intron (NM_026442, intron 2 of 3) intron (NM_026442, intron 2 of 3) 42484 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak1_78_380_0.548451903619995_8.84787313930332_7.60524969712099-2 chr8 11496964 11498206 + 7.60524969712099 NA promoter-TSS (NM_001293661) promoter-TSS (NM_001293661) 17 NM_026995 69225 Mm.64911 NM_026995 ENSMUSG00000031505 Naxd 0710008K08Rik|2810407E01Rik|Carkd NAD(P)HX dehydratase protein-coding common_peak1_78_380_0.548451903619995_8.84787313930332_7.60524969712099 chr19 6076630 6077849 + 7.60524969712099 NA promoter-TSS (NM_001081041) promoter-TSS (NM_001081041) -52 NM_001081041 68505 Mm.227361 NM_001081041 ENSMUSG00000024797 Vps51 1110014N23Rik|3110057M17Rik|AI837850|Ffr VPS51 GARP complex subunit protein-coding unique_peak1_17_29_1.59779476626415_5.70578797874059_7.605188589916 chr11 67487090 67487504 + 7.605188589916 NA Intergenic Intergenic -45701 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_17_29_1.59779476626415_5.70578797874059_7.605188589916 chr1 80739114 80739500 + 7.605188589916 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 19246 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding unique_peak1_17_29_1.59779476626415_5.70578797874059_7.605188589916-2 chr6 99171911 99172414 + 7.605188589916 NA intron (NM_001197321, intron 2 of 17) intron (NM_001197321, intron 2 of 17) 94353 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_34_104_0.967200196857411_7.19784561609483_7.60313731706304 chr14 67911796 67912505 + 7.60313731706304 NA intron (NM_177780, intron 1 of 51) intron (NM_177780, intron 1 of 51) 21422 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding common_peak2_41_142_0.844215618206466_7.58197914588162_7.6015704851167 chr11 75537800 75538853 + 7.6015704851167 NA intron (NM_001199284, intron 2 of 13) intron (NM_001199284, intron 2 of 13) 6214 NM_001199283 215113 Mm.11186 NM_173388 ENSMUSG00000038178 Slc43a2 7630402D21Rik|BC042513|Lat4 solute carrier family 43, member 2 protein-coding common_peak1_272_2981_-0.225584983410112_11.4292720505784_7.60141168004843 chr10 78298224 78300133 + 7.60141168004843 NA intron (NM_053014, intron 2 of 9) intron (NM_053014, intron 2 of 9) 41029 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA common_peak1_115_1155_-0.373037745615397_9.98840680969298_7.59926336832931 chr4 126753490 126754224 + 7.59926336832931 NA promoter-TSS (NM_133886) promoter-TSS (NM_133886) 87 NM_001035526 100317 Mm.206206 NM_133886 ENSMUSG00000028830 AU040320 A730047D20Rik|AAVR|Kiaa0319l expressed sequence AU040320 protein-coding common_peak1_81_798_-0.453996116676194_9.41505363458988_7.59905861291911 chr6 130092229 130093535 + 7.59905861291911 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -25611 NM_001252577 16635 Mm.333431 NM_010649 ENSMUSG00000079852 Klra4 Chok|Klra32|Klra33|Ly-49d|Ly49d|ly49r<129> killer cell lectin-like receptor, subfamily A, member 4 protein-coding common_peak2_81_798_-0.453996116676194_9.41505363458988_7.59905861291911 chr16 32608158 32610156 + 7.59905861291911 NA intron (NM_011638, intron 1 of 18) CpG 261 NM_011638 22042 Mm.28683 NM_011638 ENSMUSG00000022797 Tfrc 2610028K12Rik|CD71|E430033M20Rik|Mtvr1|TFR|TFR1|TR|Trfr|p90 transferrin receptor protein-coding unique_peak2_16_178_-1.08027951629008_6.94367601911921_7.5989260991826 chr13 69480601 69481695 + 7.5989260991826 NA Intergenic MTD|LTR|ERVL-MaLR 52716 NM_198600 210106 Mm.315959 NM_198600 ENSMUSG00000034575 Papd7 LAK-1|POLK|Pols|TRF4|TRF4-1 PAP associated domain containing 7 protein-coding common_peak2_289_2334_0.234174377980219_11.3062940235871_7.59870394304903 chr2 78994925 79002852 + 7.59870394304903 NA Intergenic Intergenic 129841 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_233_1751_0.268903217346327_10.9092386682743_7.59859096421862 chr11 118155491 118159862 + 7.59859096421862 NA Intergenic Intergenic -28457 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak2_83_819_-0.448780833334235_9.45508968283833_7.59724803000614 chr16 18288362 18290101 + 7.59724803000614 NA promoter-TSS (NM_033324) promoter-TSS (NM_033324) -63 NM_033324 94223 Mm.447352 NM_033324 ENSMUSG00000022718 Dgcr8 D16H22S1742E|D16H22S788E|D16Wis2|Gy1|N41|Vo59c07|mir-1306 DiGeorge syndrome critical region gene 8 protein-coding common_peak1_45_443_-0.62934275107024_8.47974449081499_7.59619402191283 chr15 73137050 73137710 + 7.59619402191283 NA intron (NM_153178, intron 3 of 18) intron (NM_153178, intron 3 of 18) 46968 NM_053068 93696 Mm.23095 NM_053068 ENSMUSG00000068391 Chrac1 2410152E03Rik|2810406L04Rik|YCL1 chromatin accessibility complex 1 protein-coding unique_peak2_9_116_-1.40584280313899_6.16744331801391_7.59567659266786 chr17 83773022 83773888 + 7.59567659266786 NA intron (NM_001171052, intron 8 of 15) intron (NM_001171052, intron 8 of 15) 67292 NM_001171052 116871 Mm.277668 NM_054082 ENSMUSG00000055817 Mta3 1110002J22Rik|mKIAA1266 metastasis associated 3 protein-coding unique_peak2_9_116_-1.40584280313899_6.16744331801391_7.59567659266786-2 chr19 40401953 40403018 + 7.59567659266786 NA promoter-TSS (NM_001034964) promoter-TSS (NM_001034964) -175 NM_001034964 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak1_21_44_1.36794464636428_6.17582541951181_7.59567659266784-2 chr2 19275940 19276448 + 7.59567659266784 NA intron (NM_001271563, intron 10 of 18) intron (NM_001271563, intron 10 of 18) -68123 NR_126563 108871 Mm.107666 NR_126563 4930447M23Rik - RIKEN cDNA 4930447M23 gene ncRNA common_peak1_21_44_1.36794464636428_6.17582541951181_7.59567659266784-2 chr7 106640764 106641320 + 7.59567659266784 NA intron (NM_001277182, intron 1 of 3) MLT2B2|LTR|ERVL 3603 NM_001277179 434223 Mm.276443 NM_001277179 Gm1966 - predicted gene 1966 protein-coding unique_peak1_21_44_1.36794464636428_6.17582541951181_7.59567659266784 chr19 14443057 14443542 + 7.59567659266784 NA Intergenic Intergenic -4793 NR_003027 19862 NR_003027 ENSMUSG00000095132 Rnu6 - U6 small nuclear RNA snRNA common_peak1_21_44_1.36794464636428_6.17582541951181_7.59567659266784 chr11 107430990 107431416 + 7.59567659266784 NA intron (NM_145823, intron 1 of 9) MTD|LTR|ERVL-MaLR 39517 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_225_1671_0.274772677277875_10.8447454707198_7.59563685660526 chr9 56089906 56092162 + 7.59563685660526 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 1058 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak2_59_251_0.657988820284143_8.30627433364199_7.59425573521623 chr14 59297006 59298192 + 7.59425573521623 NA promoter-TSS (NM_172603) promoter-TSS (NM_172603) -77 NM_172603 219131 Mm.254918 NM_172603 ENSMUSG00000044703 Phf11a 4933417L10Rik|Phf11|Phf11l PHD finger protein 11A protein-coding common_peak1_63_617_-0.521985142406495_9.01047045670113_7.59264184583651 chr11 51615171 51616076 + 7.59264184583651 NA Intergenic Intergenic -4150 NM_026631 52530 Mm.28203 NM_026631 ENSMUSG00000001056 Nhp2 2410130M07Rik|D11Ertd175e|Nola2 NHP2 ribonucleoprotein protein-coding common_peak1_67_304_0.604095450896635_8.55471315789856_7.59256207592594 chr17 27799177 27800557 + 7.59256207592594 NA intron (NM_001044719, intron 1 of 4) intron (NM_001044719, intron 1 of 4) 20675 NM_001033279 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak2_67_304_0.604095450896635_8.55471315789856_7.59256207592594 chr15 25268527 25269824 + 7.59256207592594 NA Intergenic Intergenic 144589 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak1_89_461_0.50104190733493_9.10226999508352_7.59197203634148 chr4 32117441 32118990 + 7.59197203634148 NA Intergenic MTC-int|LTR|ERVL-MaLR 154108 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_129_781_0.392502034211899_9.8072758144133_7.5918107287837 chrX 157597112 157599427 + 7.5918107287837 NA intron (NM_172307, intron 1 of 10) CpG 446 NM_172307 270669 Mm.37577 NM_172307 ENSMUSG00000046873 Mbtps2 9630032G22Rik|AI662535 membrane-bound transcription factor peptidase, site 2 protein-coding common_peak2_170_1143_0.32876189892507_10.3242522862409_7.59179457429068 chr5 125139974 125142427 + 7.59179457429068 NA intron (NM_011424, intron 1 of 46) intron (NM_011424, intron 1 of 46) 38014 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_281_3093_-0.221379566683378_11.4845676981073_7.58998549345318 chr19 12570937 12576353 + 7.58998549345318 NA intron (NM_026640, intron 1 of 3) intron (NM_026640, intron 1 of 3) 120 NM_026640 107373 Mm.1643 NM_026640 ENSMUSG00000024691 Fam111a 4632417K18Rik|AW413625 family with sequence similarity 111, member A protein-coding common_peak2_344_2938_0.209591263473781_11.6259052753882_7.58983217603696 chr11 51999236 52001692 + 7.58983217603696 NA promoter-TSS (NM_009458) promoter-TSS (NM_009458) 2 NM_009458 22210 Mm.384918 NM_009458 ENSMUSG00000020390 Ube2b 2610301N02Rik|E2-14k|HR6B|Rad6b|mHR6B ubiquitin-conjugating enzyme E2B protein-coding unique_peak1_27_70_1.13681763051324_6.7181559347613_7.58960191270511 chr19 5924286 5925003 + 7.58960191270511 NA intron (NM_026772, intron 1 of 1) intron (NM_026772, intron 1 of 1) 172 NM_026772 104252 Mm.491103 NM_026772 ENSMUSG00000045664 Cdc42ep2 1110008C05Rik|Borg1|Cep2|D19Bwg1013e CDC42 effector protein (Rho GTPase binding) 2 protein-coding common_peak1_123_1241_-0.358542631113464_10.0991781426637_7.58891637108444 chr7 4865637 4866992 + 7.58891637108444 NA promoter-TSS (NM_026158) promoter-TSS (NM_026158) -135 NM_026158 67441 Mm.41385 NM_026158 ENSMUSG00000052605 Isoc2b 0610042E07Rik|AI553388|Isoc2 isochorismatase domain containing 2b protein-coding common_peak1_116_1165_-0.370274107439352_10.0022150194808_7.58726575411446 chr11 100822115 100823439 + 7.58726575411446 NA promoter-TSS (NM_011489) promoter-TSS (NM_011489) -207 NM_011489 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding common_peak1_50_491_-0.594843728211783_8.64509264123335_7.58706652067862 chr17 28518230 28519426 + 7.58706652067862 NA Intergenic Intergenic -12033 NM_026290 67645 Mm.46170 NM_026290 ENSMUSG00000024223 Armc12 4930511I11Rik|AV041658 armadillo repeat containing 12 protein-coding common_peak2_108_608_0.441443817623304_9.47102032671798_7.58702833578945 chr10 75211856 75212818 + 7.58702833578945 NA promoter-TSS (NM_001145826) promoter-TSS (NM_001145826) -53 NM_001145826 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding common_peak2_68_667_-0.501108972227257_9.13314980636042_7.58622790847074 chr3 135593207 135595440 + 7.58622790847074 NA exon (NM_008689, exon 19 of 25) exon (NM_008689, exon 19 of 25) 97224 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_187_1960_-0.281018110393418_10.7968647649954_7.58607724227091 chr8 91072285 91075081 + 7.58607724227091 NA intron (NM_001282000, intron 1 of 20) intron (NM_001282000, intron 1 of 20) 3626 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 retinoblastoma-like 2 protein-coding common_peak1_118_689_0.416619818574112_9.63876246095259_7.58582590904793 chr7 75880919 75882404 + 7.58582590904793 NA Intergenic Intergenic 33323 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_182_1254_0.315182318362123_10.4510628080192_7.58581652212289 chr6 149192303 149195327 + 7.58581652212289 NA Intergenic RLTR30B_MM|LTR|ERV1 -5103 NM_001113424 232566 Mm.209147 NM_001113424 ENSMUSG00000068250 Amn1 5830467E07Rik|A230083D09|C730024G19Rik antagonist of mitotic exit network 1 protein-coding unique_peak2_5_82_-1.81448858562754_5.46779513853315_7.58559351452369 chr7 4061601 4062280 + 7.58559351452369 NA intron (NM_001302675, intron 1 of 6) RLTR13G|LTR|ERVK 1264 NM_001302677 52855 Mm.290880 NM_178611 ENSMUSG00000055541 Lair1 5133400O11Rik|BB115266|D7Bwg0421e|Lair-1 leukocyte-associated Ig-like receptor 1 protein-coding common_peak2_365_4166_-0.189527106315936_11.9300298315446_7.5855038808001 chr10 128090296 128095582 + 7.5855038808001 NA intron (NM_054078, intron 1 of 29) CpG 156 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak1_88_870_-0.433510539834677_9.54977363868153_7.58410039448071 chr8 111027134 111028301 + 7.58410039448071 NA promoter-TSS (NM_001190800) promoter-TSS (NM_001190800) 53 NM_172284 234733 Mm.482176 NM_172284 ENSMUSG00000033658 Ddx19b 2810457M08Rik|4921519L13Rik|AW260119 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b protein-coding common_peak2_87_446_0.508891343883345_9.05857669312499_7.58366168836245 chr2 22794175 22797148 + 7.58366168836245 NA intron (NM_019456, intron 1 of 13) RLTR13C1|LTR|ERVK 21334 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak1_18_195_-1.01434564071832_7.10753702375605_7.58360354612513-2 chr14 122064222 122064620 + 7.58360354612513 NA Intergenic RMER5|LTR|ERV1 29747 NM_001037744 223262 Mm.297637 NM_001037744 ENSMUSG00000071229 Timm8a2 - translocase of inner mitochondrial membrane 8A2 protein-coding common_peak1_18_195_-1.01434564071832_7.10753702375605_7.58360354612513-3 chr19 4296609 4297036 + 7.58360354612513 NA intron (NM_001290818, intron 1 of 20) intron (NM_001290818, intron 1 of 20) 9400 NM_130863 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding unique_peak2_18_195_-1.01434564071832_7.10753702375605_7.58360354612513 chr9 115602198 115603556 + 7.58360354612513 NA Intergenic (GGGTG)n|Simple_repeat|Simple_repeat 221058 NR_130329 100316675 NR_130329 ENSMUSG00000080409 Mir467h Mirn467h|mmu-mir-467h microRNA 467h ncRNA common_peak1_18_195_-1.01434564071832_7.10753702375605_7.58360354612513 chr13 73938459 73938897 + 7.58360354612513 NA promoter-TSS (NM_027182) promoter-TSS (NM_027182) 867 NM_001308041 105246 Mm.278509 NM_001024508 ENSMUSG00000057649 Brd9 AL022779 bromodomain containing 9 protein-coding common_peak2_409_3686_0.187929462036283_11.942196432112_7.5810353023449 chr17 31057063 31061835 + 7.5810353023449 NA intron (NM_009593, intron 1 of 14) intron (NM_009593, intron 1 of 14) 1755 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak2_199_1416_0.297228082777435_10.6172380843067_7.57909853730684 chr1 21340669 21345907 + 7.57909853730684 NA Intergenic Intergenic -6389 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_60_588_-0.537604372783488_8.93332163743872_7.57821695984214-2 chr2 181409878 181410872 + 7.57821695984214 NA TTS (NM_028125) TTS (NM_028125) 14013 NM_027656 72147 Mm.486504 NM_027656 ENSMUSG00000027583 Zbtb46 2610019F01Rik|4933406L05Rik|BZEL|Btbd4 zinc finger and BTB domain containing 46 protein-coding common_peak2_60_588_-0.537604372783488_8.93332163743872_7.57821695984214 chr2 180024067 180025774 + 7.57821695984214 NA promoter-TSS (NM_177727) promoter-TSS (NM_177727) -67 NM_177727 241846 Mm.21577 NM_177727 ENSMUSG00000039108 Lsm14b 9430078B04|BC040823 LSM family member 14B protein-coding common_peak1_60_588_-0.537604372783488_8.93332163743872_7.57821695984214 chr12 85444133 85445461 + 7.57821695984214 NA Intergenic Intergenic -29104 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak1_71_331_0.582870552898454_8.66647470779615_7.57693868778883 chr16 36930311 36931672 + 7.57693868778883 NA intron (NM_030035, intron 20 of 21) intron (NM_030035, intron 20 of 21) -3992 NM_008225 15163 Mm.4091 NM_008225 ENSMUSG00000022831 Hcls1 AW213261|HS1 hematopoietic cell specific Lyn substrate 1 protein-coding common_peak1_227_2432_-0.250797263015542_11.1231219734307_7.57432647169564 chr3 32396278 32398134 + 7.57432647169564 NA Intergenic CpG -31541 NM_009517 22401 Mm.35705 NM_009517 ENSMUSG00000027663 Zmat3 Wig1 zinc finger matrin type 3 protein-coding common_peak1_22_231_-0.919520191034062_7.39822089961054_7.57118976571561 chr5 38863961 38864521 + 7.57118976571561 NA intron (NM_013748, intron 1 of 18) intron (NM_013748, intron 1 of 18) 12452 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak2_65_637_-0.513480354917633_9.06067243630605_7.57008462564608 chr11 48854877 48857564 + 7.57008462564608 NA Intergenic Intergenic 15126 NM_008326 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47 immunity-related GTPase family M member 1 protein-coding common_peak1_36_115_0.921802656083838_7.31888232316949_7.56930960730525 chr17 69396020 69396563 + 7.56930960730525 NA Intergenic Intergenic 12313 NM_009547 22666 Mm.29434 NM_009547 ENSMUSG00000049672 Zbtb14 ZF5|Zfp161|b2b1982Clo zinc finger and BTB domain containing 14 protein-coding common_peak1_158_1034_0.34446122920971_10.1876456669915_7.56888542695414 chr3 95281073 95282004 + 7.56888542695414 NA intron (NM_173347, intron 1 of 7) CpG 538 NM_173347 229589 Mm.14155 NM_173347 ENSMUSG00000015711 Prune1 9230112O05Rik|C130058A12|DRES-17|HTCD37|PRUNEM1|Prune|Prune-M1 prune exopolyphosphatase protein-coding common_peak1_30_303_-0.781245308709279_7.85730485908895_7.5680185563312 chr2 3424056 3424577 + 7.5680185563312 NA exon (NM_001110214, exon 1 of 15) exon (NM_001110214, exon 1 of 15) 185 NM_001302684 227525 Mm.23483 NM_146114 ENSMUSG00000026648 Dclre1c 9930121L06Rik|AI661365|Art|Snm1l DNA cross-link repair 1C protein-coding common_peak2_243_1853_0.261318544794152_10.9870848010226_7.5666803715978 chr7 75785768 75789692 + 7.5666803715978 NA Intergenic Intergenic -60608 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_106_592_0.44708212480977_9.43542935695089_7.56660386153874 chr15 76246162 76247876 + 7.56660386153874 NA intron (NM_023168, intron 1 of 6) CpG 212 NM_023168 66168 Mm.41665 NM_023168 ENSMUSG00000022564 Grina 1110025J15Rik|Lag|Tmbim3 glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) protein-coding common_peak2_75_359_0.561735729439929_8.77272096104964_7.5647179565112 chr16 92620174 92621930 + 7.5647179565112 NA intron (NM_001111022, intron 5 of 6) intron (NM_001111022, intron 5 of 6) 76277 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_25_258_-0.861387043045623_7.58611476616374_7.56410233224443-2 chr5 137707402 137708044 + 7.56410233224443 NA Intergenic ZP3AR|Satellite|Satellite -22970 NM_178162 231801 Mm.260869 NM_145566 ENSMUSG00000029722 Agfg2 A630095P14Rik|Hrbl|RAB-R|RABR ArfGAP with FG repeats 2 protein-coding common_peak1_25_258_-0.861387043045623_7.58611476616374_7.56410233224443 chr11 50174754 50175252 + 7.56410233224443 NA intron (NM_026543, intron 1 of 6) CpG 152 NM_026543 68067 Mm.40828 NM_026543 ENSMUSG00000020381 Mrnip 2900016G09Rik|3010026O09Rik|AI851514|AW475975 MRN complex interacting protein protein-coding common_peak1_121_1219_-0.36153367021692_10.0718985973418_7.5640644452663 chr9 41080823 41082867 + 7.5640644452663 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) 75649 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak2_74_727_-0.47764493190903_9.26897217424418_7.562908287675 chr1 178368416 178370140 + 7.562908287675 NA Intergenic Intergenic -31494 NM_016805 51810 Mm.86589 NM_016805 ENSMUSG00000039630 Hnrnpu AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U heterogeneous nuclear ribonucleoprotein U protein-coding common_peak1_74_727_-0.47764493190903_9.26897217424418_7.562908287675 chr6 128889249 128890430 + 7.562908287675 NA intron (NM_001289706, intron 2 of 6) L1MA7|LINE|L1 1285 NM_001254946 232406 Mm.30745 NM_001254946 ENSMUSG00000090164 BC035044 - cDNA sequence BC035044 protein-coding common_peak1_308_2540_0.224501739876668_11.4234315299917_7.56268998120928 chr9 116174281 116176118 + 7.56268998120928 NA 5' UTR (NM_029575, exon 1 of 7) 5' UTR (NM_029575, exon 1 of 7) 164 NM_029575 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_26_266_-0.83848836484796_7.64145174926357_7.56178739799049 chr9 32930055 32930590 + 7.56178739799049 NA Intergenic Intergenic -1356 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak2_103_569_0.453827757961539_9.38173198803288_7.56027371074723 chr8 84638324 84640211 + 7.56027371074723 NA exon (NM_001252059, exon 46 of 46) exon (NM_001252059, exon 46 of 46) 23585 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding common_peak2_111_1111_-0.379151700332869_9.92936522255707_7.56016151357725 chr9 22069888 22072186 + 7.56016151357725 NA promoter-TSS (NR_040407) promoter-TSS (NR_040407) 35 NR_040406 100503652 Mm.439941 NR_040406 ENSMUSG00000096981 Gm16845 - predicted gene, 16845 ncRNA common_peak2_48_471_-0.605766812451156_8.57975964313626_7.55997149739641 chr3 21991179 21992820 + 7.55997149739641 NA Intergenic Intergenic -84653 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_48_471_-0.605766812451156_8.57975964313626_7.55997149739641 chr12 59066177 59066878 + 7.55997149739641 NA promoter-TSS (NM_008891) promoter-TSS (NM_008891) -392 NM_008891 18949 Mm.22347 NM_008891 ENSMUSG00000020994 Pnn AU045199|D12Ertd512e pinin protein-coding common_peak1_209_1514_0.287090463502862_10.7086473101117_7.55937436620164 chr4 155249278 155250910 + 7.55937436620164 NA non-coding (NR_033802, exon 1 of 3) non-coding (NR_033802, exon 1 of 3) 128 NR_033802 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding common_peak1_20_213_-0.963992342602649_7.25947081509982_7.55935478203954 chr2 78981079 78981522 + 7.55935478203954 NA Intergenic L2|LINE|L2 112253 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_424_3864_0.183494735918602_12.0080000667715_7.55798381236564 chr11 116029995 116032074 + 7.55798381236564 NA intron (NM_001286006, intron 1 of 15) intron (NM_001286006, intron 1 of 15) 718 NM_172569 217331 Mm.297706 NM_172569 ENSMUSG00000020770 Unk B230379M23Rik|Zc3h5|Zc3hdc5|mKIAA1753 unkempt family zinc finger protein-coding unique_peak2_15_169_-1.11313767301253_6.85282209963144_7.55784536708533 chr7 125476115 125477332 + 7.55784536708533 NA intron (NM_026330, intron 2 of 7) intron (NM_026330, intron 2 of 7) 14819 NM_026330 67711 Mm.4467 NM_026330 ENSMUSG00000030750 Nsmce1 2510027N19Rik NSE1 homolog, SMC5-SMC6 complex component protein-coding common_peak1_15_169_-1.11313767301253_6.85282209963144_7.55784536708533-2 chr9 66917869 66918251 + 7.55784536708533 NA intron (NM_173413, intron 1 of 7) B3|SINE|B2 1645 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak1_15_169_-1.11313767301253_6.85282209963144_7.55784536708533 chr7 80774526 80774922 + 7.55784536708533 NA intron (NM_016721, intron 2 of 37) MTE2b|LTR|ERVL-MaLR 28607 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_89_880_-0.430207260169427_9.5678945788357_7.55754059414596 chr7 126428430 126429545 + 7.55754059414596 NA 5' UTR (NM_030566, exon 1 of 13) 5' UTR (NM_030566, exon 1 of 13) 220 NM_030566 70314 Mm.35467 NM_030566 ENSMUSG00000030727 Rabep2 2610011A08Rik|AI462746|Fra rabaptin, RAB GTPase binding effector protein 2 protein-coding common_peak2_116_673_0.420473184579286_9.6068413734715_7.55682920415197 chr17 46382875 46384796 + 7.55682920415197 NA promoter-TSS (NM_021346) promoter-TSS (NM_021346) 69 NM_021346 57908 Mm.439916 NM_021346 ENSMUSG00000015597 Zfp318 2610034E08Rik|D530032D06Rik|TZF|Znf318 zinc finger protein 318 protein-coding common_peak1_116_673_0.420473184579286_9.6068413734715_7.55682920415197 chr10 127266090 127267056 + 7.55682920415197 NA intron (NM_027151, intron 1 of 13) CpG 311 NM_001190453 69654 Mm.167537 NM_027151 ENSMUSG00000025410 Dctn2 2310042E05Rik|C130077D06Rik|C87049|DCTN-50|GMP23-48K|RBP50|p50 dynactin 2 protein-coding common_peak1_51_201_0.723822073075493_8.02012251928954_7.55653175111749 chr11 120795667 120796623 + 7.55653175111749 NA 5' UTR (NM_026824, exon 1 of 14) 5' UTR (NM_026824, exon 1 of 14) 250 NM_026824 68730 Mm.180622 NM_026824 ENSMUSG00000025155 Dus1l 1110032N12Rik dihydrouridine synthase 1-like (S. cerevisiae) protein-coding common_peak2_362_3142_0.20277480398998_11.7193139587937_7.55569113954645 chr1 66813387 66818504 + 7.55569113954645 NA intron (NM_001122738, intron 1 of 14) intron (NM_001122738, intron 1 of 14) 1650 NM_177645 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding common_peak1_102_1016_-0.398556080080761_9.79082592381712_7.55410952281929 chr2 57180998 57182324 + 7.55410952281929 NA promoter-TSS (NR_040633) promoter-TSS (NR_040633) 93 NR_040356 767815 Mm.188065 NR_040356 ENSMUSG00000084938 BB557941 - expressed sequence BB557941 ncRNA common_peak1_173_1798_-0.293569329399274_10.6661948065518_7.55385817740646 chr7 24902303 24903900 + 7.55385817740646 NA TTS (NM_007655) TTS (NM_007655) 115 NM_001130151 16801 Mm.3181 NM_008488 ENSMUSG00000040940 Arhgef1 Lbcl2|Lsc Rho guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_94_932_-0.417263480576548_9.65710153056349_7.5537186270688 chr14 60251616 60252448 + 7.5537186270688 NA promoter-TSS (NM_170591) promoter-TSS (NM_170591) -654 NM_170591 71844 Mm.258051 NM_170591 ENSMUSG00000063895 Nupl1 1700017F11Rik|Nup58|mKIAA0410 nucleoporin like 1 protein-coding common_peak1_69_676_-0.494953997865107_9.15553502464244_7.55220917836002 chr13 19356347 19357472 + 7.55220917836002 NA TTS (NM_024270) TTS (NM_024270) 38904 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak2_305_2508_0.225520849057924_11.4056571799381_7.54971757850114 chr15 27923052 27927552 + 7.54971757850114 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 100546 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_178_1218_0.318062174802556_10.4105134980215_7.54903982642497 chr6 97310485 97312978 + 7.54903982642497 NA intron (NM_145148, intron 12 of 23) intron (NM_145148, intron 12 of 23) -58951 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding unique_peak2_32_321_-0.753596930453738_7.95411841288775_7.54765630227687 chr11 3894287 3895835 + 7.54765630227687 NA promoter-TSS (NM_026150) promoter-TSS (NM_026150) 65 NM_026150 67430 Mm.347950 NM_026150 ENSMUSG00000020434 4921536K21Rik AV043724 RIKEN cDNA 4921536K21 gene protein-coding common_peak2_98_530_0.468886413010011_9.28701125730916_7.54686485342808 chr17 28255763 28258057 + 7.54686485342808 NA intron (NM_011145, intron 2 of 7) intron (NM_011145, intron 2 of 7) -14798 NR_045427 69050 Mm.486938 NR_045427 ENSMUSG00000002250 1810013A23Rik - RIKEN cDNA 1810013A23 gene ncRNA common_peak1_38_376_-0.685477263660803_8.21568208143826_7.54526832089852 chr19 53894537 53895296 + 7.54526832089852 NA intron (NM_011050, intron 1 of 11) intron (NM_011050, intron 1 of 11) 2685 NM_011050 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding unique_peak2_33_330_-0.74053883464669_8.00041798948387_7.54346443987923 chr10 8531161 8532441 + 7.54346443987923 NA Intergenic Intergenic -12976 NM_177387 338362 Mm.41163 NM_177387 ENSMUSG00000047712 Ust D930010O20Rik|UA2OST uronyl-2-sulfotransferase protein-coding unique_peak2_34_339_-0.727945221614169_8.04541832533062_7.54278540833449 chr17 88670582 88672470 + 7.54278540833449 NA exon (NM_023630, exon 3 of 9) exon (NM_023630, exon 3 of 9) 2866 NM_023630 71828 Mm.61330 NM_023630 ENSMUSG00000024154 Gtf2a1l 1700011N16Rik|Alf|Gtf2a1lf general transcription factor IIA, 1-like protein-coding common_peak1_68_311_0.597193101384546_8.58399876955452_7.54116125182753 chr15 9140461 9141111 + 7.54116125182753 NA promoter-TSS (NM_013787) promoter-TSS (NM_013787) 216 NM_177178 320506 Mm.259886 NM_177178 ENSMUSG00000039704 Lmbrd2 9930036E21Rik LMBR1 domain containing 2 protein-coding common_peak1_258_2807_-0.232007459827679_11.3393234903907_7.53820790708886 chr11 67525564 67528197 + 7.53820790708886 NA Intergenic Intergenic -6118 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_28_75_1.10073580106898_6.79829541397808_7.53702745646424 chr5 34194330 34194999 + 7.53702745646424 NA TTS (NM_001015039) TTS (NM_001015039) -6954 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding common_peak2_366_4177_-0.188502044120286_11.934345755007_7.53574750218389 chr9 65548865 65554027 + 7.53574750218389 NA Intergenic Intergenic 28641 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak2_107_601_0.441812512452605_9.45452593298601_7.53533476548633 chr4 14825614 14827431 + 7.53533476548633 NA promoter-TSS (NM_152812) promoter-TSS (NM_152812) 65 NM_152812 72201 Mm.387724 NM_152812 ENSMUSG00000040550 Otud6b 2600013N14Rik|AU015433 OTU domain containing 6B protein-coding common_peak1_37_367_-0.696585441473766_8.17526923532013_7.53401426459561 chr16 46000972 46001621 + 7.53401426459561 NA intron (NM_001134480, intron 1 of 3) intron (NM_001134480, intron 1 of 3) 9117 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding unique_peak1_24_57_1.22803419700881_6.47199809363198_7.5334168319936 chr11 118000720 118001387 + 7.5334168319936 NA intron (NM_133757, intron 3 of 9) intron (NM_133757, intron 3 of 9) -1217 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA unique_peak1_24_57_1.22803419700881_6.47199809363198_7.5334168319936-2 chr16 58408252 58408803 + 7.5334168319936 NA promoter-TSS (NM_028523) promoter-TSS (NM_028523) -8 NM_028523 73379 Mm.373589 NM_028523 ENSMUSG00000035107 Dcbld2 1700055P21Rik|AW146002|CLCP1|Esdn discoidin, CUB and LCCL domain containing 2 protein-coding common_peak1_527_5127_0.159588645787563_12.4039748695125_7.53031804914404 chr19 57129862 57134113 + 7.53031804914404 NA intron (NM_001290813, intron 6 of 20) intron (NM_001290813, intron 6 of 20) -12963 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_142_1448_-0.328651532974503_10.3365161130697_7.52988529527867 chr12 55301887 55303616 + 7.52988529527867 NA 5' UTR (NM_025373, exon 1 of 7) 5' UTR (NM_025373, exon 1 of 7) 114 NM_025373 66132 Mm.383213 NM_025373 ENSMUSG00000021023 1110008L16Rik Kiaa0391|Mrpp3|mKIAA0391 RIKEN cDNA 1110008L16 gene protein-coding common_peak1_19_203_-0.981291114340719_7.18177978480114_7.52938200649373-2 chr19 60949022 60949524 + 7.52938200649373 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 59524 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak1_19_203_-0.981291114340719_7.18177978480114_7.52938200649373 chr11 5736766 5737260 + 7.52938200649373 NA intron (NM_001077661, intron 1 of 5) intron (NM_001077661, intron 1 of 5) 4163 NM_178623 72046 Mm.271657 NM_178623 ENSMUSG00000049680 Urgcp 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 upregulator of cell proliferation protein-coding common_peak1_196_2063_-0.272120638797954_10.8751669360243_7.5258738442755 chr17 27341915 27343807 + 7.5258738442755 NA Intergenic Intergenic -12877 NR_106076 102465701 NR_106076 ENSMUSG00000106578 Mir7217 mmu-mir-7217 microRNA 7217 ncRNA common_peak2_88_869_-0.431853221971902_9.54894497975014_7.52407010619249 chr9 15279211 15280798 + 7.52407010619249 NA promoter-TSS (NM_144933) promoter-TSS (NM_144933) -137 NM_144933 234959 Mm.44151 NM_144933 ENSMUSG00000031935 Med17 77kDa|C330002H14Rik|Crsp6|Trap80 mediator complex subunit 17 protein-coding common_peak2_63_616_-0.519648793651537_9.00930228232365_7.52141803300317 chr15 89088404 89089950 + 7.52141803300317 NA promoter-TSS (NM_027905) promoter-TSS (NM_027905) 70 NM_027905 223776 Mm.44763 NM_027905 ENSMUSG00000035757 Selenoo 1300018J18Rik|Selo selenoprotein O protein-coding common_peak2_99_538_0.465098351756589_9.3066906386308_7.52016450719093 chr11 87719352 87722059 + 7.52016450719093 NA intron (NM_172448, intron 3 of 9) PB1D7|SINE|Alu -16860 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding common_peak2_46_452_-0.620236152620217_8.51324916373613_7.52001444885786 chr19 8770366 8771826 + 7.52001444885786 NA promoter-TSS (NM_025791) promoter-TSS (NM_025791) 100 NM_025791 66836 Mm.440071 NM_025791 ENSMUSG00000010097 Tmem223 0610006I08Rik transmembrane protein 223 protein-coding common_peak1_53_213_0.707352891624804_8.09514343221355_7.51900775021397 chr6 136531707 136532598 + 7.51900775021397 NA intron (NM_019426, intron 1 of 14) intron (NM_019426, intron 1 of 14) 13301 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding unique_peak2_12_142_-1.23106240332381_6.54434013511648_7.51848825712076 chr4 140964431 140965673 + 7.51848825712076 NA intron (NM_023374, intron 1 of 7) intron (NM_023374, intron 1 of 7) 3781 NM_023374 67680 Mm.246965 NM_023374 ENSMUSG00000009863 Sdhb 0710008N11Rik succinate dehydrogenase complex, subunit B, iron sulfur (Ip) protein-coding unique_peak2_68_666_-0.49894763093779_9.13206913571569_7.51773082078282 chr3 96882151 96884514 + 7.51773082078282 NA intron (NM_026229, intron 7 of 13) intron (NM_026229, intron 7 of 13) 21966 NM_026229 67549 Mm.46722 NM_026229 ENSMUSG00000028096 Gpr89 4933412D19Rik|Gpr89a|SH120 G protein-coupled receptor 89 protein-coding common_peak2_156_1604_-0.310881947604017_10.4929166082077_7.51560224751521 chr16 17529934 17531994 + 7.51560224751521 NA promoter-TSS (NM_026909) promoter-TSS (NM_026909) 88 NM_026909 69009 Mm.10174 NM_026909 ENSMUSG00000022760 Thap7 1810004B07Rik THAP domain containing 7 protein-coding unique_peak2_13_151_-1.18797507461202_6.65393997613758_7.514584266832 chr10 14042236 14043473 + 7.514584266832 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 76475 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_13_151_-1.18797507461202_6.65393997613758_7.514584266832 chr4 155846901 155847309 + 7.514584266832 NA promoter-TSS (NM_010091) promoter-TSS (NM_010091) -212 NM_001302342 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding common_peak1_145_920_0.36187399148065_10.0279943418317_7.51313020318185 chr8 35428123 35430668 + 7.51313020318185 NA Intergenic Intergenic 53654 NM_177741 244416 Mm.247126 NM_177741 ENSMUSG00000046794 Ppp1r3b 6430576E21|AW821953|GL|PTG protein phosphatase 1, regulatory (inhibitor) subunit 3B protein-coding common_peak2_135_833_0.379469621088578_9.89363838398895_7.51149354442044 chr15 52711700 52713264 + 7.51149354442044 NA promoter-TSS (NM_027212) promoter-TSS (NM_027212) 37 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak2_74_353_0.56254415820667_8.74887762918633_7.51056347355845 chr5 142911347 142913678 + 7.51056347355845 NA Intergenic Intergenic -5758 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_74_353_0.56254415820667_8.74887762918633_7.51056347355845 chr9 69457260 69458388 + 7.51056347355845 NA TTS (NR_037296) TTS (NR_037296) 880 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA common_peak2_220_1623_0.277205258863829_10.8039385466171_7.50956747486057 chr19 34582027 34584077 + 7.50956747486057 NA promoter-TSS (NM_010501) promoter-TSS (NM_010501) -477 NM_010501 15959 Mm.426079 NM_010501 ENSMUSG00000074896 Ifit3 Ifi49|P49 interferon-induced protein with tetratricopeptide repeats 3 protein-coding common_peak1_176_1200_0.319640485489474_10.3898406784504_7.5085457714317 chr2 57115143 57116685 + 7.5085457714317 NA promoter-TSS (NM_013613) promoter-TSS (NM_013613) -876 NM_013613 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak1_50_490_-0.591908437187236_8.64362499572107_7.50735375044166 chr10 59974201 59974990 + 7.50735375044166 NA Intergenic Intergenic -22825 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak1_49_189_0.742771894991793_7.94124155582684_7.50730755909388 chr19 57357699 57358543 + 7.50730755909388 NA intron (NR_040316, intron 1 of 2) HAL1|LINE|L1 2778 NR_040316 320879 Mm.375089 NR_040316 ENSMUSG00000097785 B230217O12Rik - RIKEN cDNA B230217O12 gene ncRNA common_peak2_44_432_-0.632044577162093_8.44220092614568_7.50662213126655 chr7 19714512 19715653 + 7.50662213126655 NA exon (NM_001109748, exon 1 of 9) exon (NM_001109748, exon 1 of 9) 347 NM_001109748 53333 Mm.61682 NM_016871 ENSMUSG00000002984 Tomm40 AW539759|Mom35|Tom40 translocase of outer mitochondrial membrane 40 homolog (yeast) protein-coding common_peak1_463_4335_0.172963517904122_12.1686308003059_7.50534817660082 chr7 73617328 73619494 + 7.50534817660082 NA Intergenic CpG -60016 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak2_60_587_-0.535152893789391_8.93209589794167_7.50534699877425 chr19 11416504 11419699 + 7.50534699877425 NA intron (NM_029499, intron 4 of 6) intron (NM_029499, intron 4 of 6) 10440 NM_029499 64380 Mm.440715 NM_029499 ENSMUSG00000024675 Ms4a4c 5830413L19Rik|AI449185|Ms4a9 membrane-spanning 4-domains, subfamily A, member 4C protein-coding unique_peak2_7_99_-1.57421523783591_5.85674857085677_7.5039186149452 chr11 82907998 82908748 + 7.5039186149452 NA promoter-TSS (NM_145431) promoter-TSS (NM_145431) 22 NM_145431 217011 Mm.29176 NM_145431 ENSMUSG00000020692 Nle1 AL022765|BC018399|Nle|l11Jus1|l11Jus4 notchless homolog 1 (Drosophila) protein-coding common_peak1_62_271_0.634146318701443_8.40453600060106_7.50321753761136 chr14 121361400 121362607 + 7.50321753761136 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 17227 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_168_1126_0.329542048357188_10.3030428243508_7.5008349565435 chr1 193206462 193208867 + 7.5008349565435 NA Intergenic ORR1B1|LTR|ERVL-MaLR -6118 NM_153137 215243 Mm.261259 NM_153137 ENSMUSG00000037318 Traf3ip3 6030423D04Rik|AI115021|T3jam TRAF3 interacting protein 3 protein-coding common_peak1_24_248_-0.873986739931697_7.52300856210223_7.49866655675218-2 chr16 87501265 87501764 + 7.49866655675218 NA intron (NR_040375, intron 1 of 2) PB1D9|SINE|Alu 5441 NR_040375 414095 Mm.166361 NR_040375 ENSMUSG00000093606 B130034C11Rik - RIKEN cDNA B130034C11 gene ncRNA common_peak1_24_248_-0.873986739931697_7.52300856210223_7.49866655675218 chr11 103016426 103017037 + 7.49866655675218 NA intron (NM_026551, intron 1 of 4) intron (NM_026551, intron 1 of 4) 416 NM_026551 68087 Mm.277449 NM_026551 ENSMUSG00000020935 Dcakd 3010024O21Rik|6720485C15Rik|AI849483 dephospho-CoA kinase domain containing protein-coding common_peak1_310_3454_-0.207370604141556_11.6507846932048_7.4975145082832 chr6 142570884 142573956 + 7.4975145082832 NA Intergenic Intergenic -1064 NM_008428 16523 Mm.1482 NM_008428 ENSMUSG00000030247 Kcnj8 AI448900|Kir6.1|gnite|slmbr|sltr|uKATP-1 potassium inwardly-rectifying channel, subfamily J, member 8 protein-coding common_peak1_74_726_-0.475661845629928_9.26798063110463_7.49737895653372 chrX 73913650 73914918 + 7.49737895653372 NA Intergenic Intergenic -2986 NM_001162424 171207 Mm.482337 NM_138630 ENSMUSG00000031389 Arhgap4 A130009C12Rik|A530015A20Rik|Rgc1|c1|mKIAA0131 Rho GTPase activating protein 4 protein-coding common_peak1_29_80_1.06880642971308_6.87425321774116_7.49704233731201 chr4 20042013 20042522 + 7.49704233731201 NA exon (NM_010281, exon 1 of 9) exon (NM_010281, exon 1 of 9) 215 NM_010281 14590 Mm.20461 NM_010281 ENSMUSG00000073987 Ggh gamma-GH gamma-glutamyl hydrolase protein-coding common_peak2_109_617_0.436440301667897_9.48968317873832_7.49607026793159-2 chr9 35199084 35200855 + 7.49607026793159 NA promoter-TSS (NM_001177847) promoter-TSS (NM_001177847) -4 NM_054096 117149 Mm.23987 NM_054096 ENSMUSG00000032041 Tirap AA407980|C130027E04Rik|Mal|Tlr4ap|Wyatt toll-interleukin 1 receptor (TIR) domain-containing adaptor protein protein-coding common_peak2_109_617_0.436440301667897_9.48968317873832_7.49607026793159 chr13 81175186 81177777 + 7.49607026793159 NA intron (NM_054053, intron 86 of 89) intron (NM_054053, intron 86 of 89) 212407 NR_015587 319983 Mm.343027 NR_015587 ENSMUSG00000097098 9330111N05Rik - RIKEN cDNA 9330111N05 gene ncRNA common_peak2_147_1502_-0.32062102033224_10.3933187837502_7.49249298192552 chr17 32319992 32322154 + 7.49249298192552 NA TTS (NM_017476) TTS (NM_017476) 165 NM_019774 56399 Mm.328945 NM_019774 ENSMUSG00000024045 Akap8 1200016A02Rik|AA673585|AKAP-8|AKAP95|AU015639 A kinase (PRKA) anchor protein 8 protein-coding common_peak1_49_480_-0.597265580447301_8.61126029354639_7.49227733297042 chr11 75279066 75279865 + 7.49227733297042 NA Intergenic Intergenic 68918 NM_001164223 68275 Mm.102574 NM_026653 ENSMUSG00000000751 Rpa1 5031405K23Rik|70kDa|AA589576|AW557552|RF-A|RP-A|Rpa replication protein A1 protein-coding common_peak1_62_606_-0.523943546303899_8.98358093310373_7.4912082191163 chr13 54188290 54189317 + 7.4912082191163 NA Intergenic Intergenic -3326 NM_001010973 15466 Mm.57243 NM_008286 ENSMUSG00000034987 Hrh2 - histamine receptor H2 protein-coding common_peak1_62_606_-0.523943546303899_8.98358093310373_7.4912082191163-2 chr4 108458060 108458874 + 7.4912082191163 NA promoter-TSS (NM_175472) promoter-TSS (NM_175472) -959 NM_175472 230594 Mm.25181 NM_175472 ENSMUSG00000034610 Zcchc11 6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191 zinc finger, CCHC domain containing 11 protein-coding common_peak2_42_148_0.82655864979179_7.63244784535806_7.4899057756617 chr14 69706951 69707653 + 7.4899057756617 NA 5' UTR (NM_001301652, exon 1 of 7) 5' UTR (NM_001301652, exon 1 of 7) 191 NM_001301652 71843 Mm.27738 NM_001146012 ENSMUSG00000034194 R3hcc1 1700020M16Rik|AA407796 R3H domain and coiled-coil containing 1 protein-coding common_peak2_92_485_0.48600421728181_9.16781461224669_7.48942158135828 chr4 119815898 119818016 + 7.48942158135828 NA intron (NM_010657, intron 1 of 8) intron (NM_010657, intron 1 of 8) 2279 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak2_52_207_0.71530204730202_8.0580907417921_7.48882631611498 chr7 29815543 29816639 + 7.48882631611498 NA promoter-TSS (NM_001145880) promoter-TSS (NM_001145880) 19 NM_001145880 233056 Mm.224766 NM_146185 ENSMUSG00000011427 Zfp790 6330581L23Rik zinc finger protein 790 protein-coding common_peak2_92_910_-0.420490522914461_9.62106198234482_7.48334750414882 chr2 34798950 34800547 + 7.48334750414882 NA intron (NM_145522, intron 1 of 7) intron (NM_145522, intron 1 of 7) 164 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding common_peak2_120_707_0.408961294552451_9.67208619735922_7.48278295977975 chr7 49118600 49121447 + 7.48278295977975 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) -126166 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_132_1337_-0.3419620879791_10.2148813566519_7.48272096375963 chr5 8995743 8997988 + 7.48272096375963 NA intron (NM_023733, intron 1 of 17) intron (NM_023733, intron 1 of 17) 281 NM_023733 74114 Mm.28197 NM_023733 ENSMUSG00000003623 Crot 1200003H03Rik carnitine O-octanoyltransferase protein-coding common_peak1_29_293_-0.79101591223866_7.80416438871703_7.48244854483582-2 chr9 61963487 61964091 + 7.48244854483582 NA exon (NM_028748, exon 6 of 8) exon (NM_028748, exon 6 of 8) -16990 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding common_peak1_29_293_-0.79101591223866_7.80416438871703_7.48244854483582 chr8 13757710 13758188 + 7.48244854483582 NA intron (NM_027276, intron 1 of 17) intron (NM_027276, intron 1 of 17) 259 NM_027276 69957 Mm.182412 NM_027276 ENSMUSG00000038416 Cdc16 2700071J12Rik|2810431D22Rik|APC6 CDC16 cell division cycle 16 protein-coding common_peak1_42_413_-0.647759787245374_8.36960706387664_7.48061638806554 chrX 167107808 167108674 + 7.48061638806554 NA Intergenic Intergenic -37871 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak2_71_332_0.578531617174118_8.66864417565832_7.48015956513374 chr8 72215336 72217030 + 7.48015956513374 NA Intergenic PB1D10|SINE|Alu -3346 NM_001080812 234421 Mm.211247 NM_001080812 ENSMUSG00000074240 Cib3 C730014M21Rik|Gm1107|KIP3 calcium and integrin binding family member 3 protein-coding common_peak1_71_695_-0.48503351160335_9.20042674004705_7.47605277589783 chr13 46779575 46780814 + 7.47605277589783 NA intron (NM_010617, intron 25 of 37) intron (NM_010617, intron 25 of 37) -52345 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding unique_peak1_16_26_1.6486487588107_5.57921188156882_7.47442460200306-2 chr11 67658019 67658445 + 7.47442460200306 NA intron (NM_001277079, intron 5 of 13) intron (NM_001277079, intron 5 of 13) -37094 NM_009038 19674 Mm.439726 NM_009038 ENSMUSG00000020907 Rcvrn CAR|S-modulin recoverin protein-coding unique_peak1_16_26_1.6486487588107_5.57921188156882_7.47442460200306-3 chr15 77827072 77827443 + 7.47442460200306 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 14918 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak1_16_26_1.6486487588107_5.57921188156882_7.47442460200306 chr11 44540439 44540925 + 7.47442460200306 NA intron (NM_028862, intron 3 of 10) MTD|LTR|ERVL-MaLR 21305 NM_001166553 74315 Mm.156771 NM_028862 ENSMUSG00000019189 Rnf145 3732413I11Rik|TMRF1 ring finger protein 145 protein-coding unique_peak1_16_26_1.6486487588107_5.57921188156882_7.47442460200306-4 chr2 11544054 11544430 + 7.47442460200306 NA intron (NM_001177758, intron 1 of 14) ID_B1|SINE|B4 9687 NM_001177758 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding common_peak1_83_817_-0.445257766770538_9.45332814955648_7.4736463667057 chr6 29215418 29216581 + 7.4736463667057 NA intron (NM_001302933, intron 1 of 14) CpG 365 NM_001302933 23917 Mm.260707 NM_011829 ENSMUSG00000003500 Impdh1 B930086D20Rik|IMPDH-I inosine 5'-phosphate dehydrogenase 1 protein-coding common_peak2_673_7030_0.136280947186485_12.8476546527367_7.47235962690388 chr19 8979446 8986321 + 7.47235962690388 NA Intergenic Intergenic -6401 NR_104460 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_75_360_0.557733798882433_8.77472192632839_7.47181280589912 chr10 79097058 79097776 + 7.47181280589912 NA intron (NM_001004362, intron 1 of 5) intron (NM_001004362, intron 1 of 5) 183 NM_001004362 72128 Mm.297854 NM_001004362 ENSMUSG00000060301 2610008E11Rik - RIKEN cDNA 2610008E11 gene protein-coding common_peak2_522_5066_0.160015392403734_12.3869238097244_7.47125656094843 chr9 32537083 32543320 + 7.47125656094843 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 1251 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_101_1003_-0.397260465636959_9.77291332113229_7.46908366026636 chr13 37540512 37541717 + 7.46908366026636 NA Intergenic Intergenic 195769 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding common_peak1_302_3352_-0.210254058035042_11.6061097387763_7.46854440477548 chr4 126254673 126257090 + 7.46854440477548 NA intron (NM_144941, intron 1 of 16) CpG 438 NM_144941 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding common_peak1_30_85_1.04041745003221_6.9464734797182_7.46782736560841-3 chr6 94500081 94500751 + 7.46782736560841 NA 5' UTR (NM_026255, exon 1 of 10) 5' UTR (NM_026255, exon 1 of 10) 102 NM_026255 67582 Mm.280725 NM_026255 ENSMUSG00000045100 Slc25a26 4930433D19Rik|4933433F13Rik|AW557176|D6Bwg0781e|Slc25a6 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26 protein-coding common_peak1_30_85_1.04041745003221_6.9464734797182_7.46782736560841 chr1 143702980 143703547 + 7.46782736560841 NA promoter-TSS (NM_145991) promoter-TSS (NM_145991) -370 NM_145991 214498 Mm.156727 NM_145991 ENSMUSG00000026361 Cdc73 8430414L16Rik|C130030P16Rik|C81219|Hrpt2 cell division cycle 73, Paf1/RNA polymerase II complex component protein-coding common_peak2_30_85_1.04041745003221_6.9464734797182_7.46782736560841 chr11 32425212 32425936 + 7.46782736560841 NA 3' UTR (NM_177364, exon 13 of 13) 3' UTR (NM_177364, exon 13 of 13) -29798 NM_173784 327900 Mm.260956 NM_173784 ENSMUSG00000044949 Ubtd2 4930571L24|9630054F20Rik|AI645720 ubiquitin domain containing 2 protein-coding common_peak1_30_85_1.04041745003221_6.9464734797182_7.46782736560841-2 chr11 115130725 115131403 + 7.46782736560841 NA intron (NM_145634, intron 1 of 6) intron (NM_145634, intron 1 of 6) 2928 NM_001169153 246746 Mm.277387 NM_145634 ENSMUSG00000047798 Cd300lf CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3 CD300 molecule like family member F protein-coding common_peak1_310_2564_0.222356280639648_11.4359212508142_7.46757708326802 chr5 28316241 28317934 + 7.46757708326802 NA promoter-TSS (NM_028234) promoter-TSS (NM_028234) -102 NM_028234 381626 Mm.304075 NM_028234 ENSMUSG00000048271 Rbm33 3200001K10Rik|6430512A10Rik|AA386890|Prr8 RNA binding motif protein 33 protein-coding common_peak1_47_177_0.764654348312054_7.85806060512243_7.4670519122346 chr13 54468221 54469018 + 7.4670519122346 NA exon (NM_028597, exon 1 of 6) exon (NM_028597, exon 1 of 6) 221 NM_028597 73666 Mm.292487 NM_028597 ENSMUSG00000025872 Thoc3 2410044K02Rik|AL033344 THO complex 3 protein-coding common_peak1_55_537_-0.558285301352342_8.79231971188045_7.46687616901827 chr9 61683128 61683872 + 7.46687616901827 NA Intergenic Intergenic 231010 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_213_1555_0.281956385555937_10.7446045377642_7.46686468989878 chr8 22475990 22477701 + 7.46686468989878 NA promoter-TSS (NM_001012667) promoter-TSS (NM_001012667) 34 NM_001012667 102032 Mm.378231 NM_001012667 ENSMUSG00000031534 Smim19 AI316807|BG694986|EST-c39 small integral membrane protein 19 protein-coding common_peak1_187_1304_0.306521618341485_10.503094900628_7.46596547391529 chr11 69765382 69766695 + 7.46596547391529 NA 5' UTR (NM_029348, exon 1 of 4) 5' UTR (NM_029348, exon 1 of 4) 126 NM_029348 75580 Mm.426361 NM_029348 ENSMUSG00000018750 Zbtb4 2310026P19Rik|9230111I22Rik|mKIAA1538 zinc finger and BTB domain containing 4 protein-coding common_peak1_221_2357_-0.252817524428711_11.0769392407654_7.46576391146311 chr2 165212051 165213897 + 7.46576391146311 NA intron (NM_174988, intron 1 of 11) intron (NM_174988, intron 1 of 11) 21763 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak2_125_1260_-0.352131089190081_10.1242870157332_7.46511044449242 chr12 85338424 85340906 + 7.46511044449242 NA promoter-TSS (NM_145138) promoter-TSS (NM_145138) -303 NM_145138 217718 Mm.29071 NM_145138 ENSMUSG00000034290 Nek9 C130021H08Rik NIMA (never in mitosis gene a)-related expressed kinase 9 protein-coding common_peak1_215_2286_-0.257196150013009_11.0306425754052_7.46510549041583 chr11 106778568 106780524 + 7.46510549041583 NA promoter-TSS (NR_027785) promoter-TSS (NR_027785) -9 NM_015810 50776 Mm.859 NM_015810 ENSMUSG00000020718 Polg2 - polymerase (DNA directed), gamma 2, accessory subunit protein-coding common_peak1_552_5446_0.154389048538343_12.4884406761096_7.46450035976316 chr11 83635530 83640448 + 7.46450035976316 NA Intergenic L1MA4A|LINE|L1 11389 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak1_66_645_-0.504846654544201_9.08296702742182_7.46327297072984 chr1 21324218 21325360 + 7.46327297072984 NA Intergenic Intergenic -24888 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_121_1217_-0.359166655673004_10.0707150900698_7.46282849985964 chr10 79926234 79927902 + 7.46282849985964 NA promoter-TSS (NM_007880) promoter-TSS (NM_007880) 25 NM_007880 13496 Mm.301282 NM_007880 ENSMUSG00000019564 Arid3a Bright|Dri1|Dril1 AT rich interactive domain 3A (BRIGHT-like) protein-coding common_peak2_114_658_0.422431735963778_9.57535052298994_7.46032630575048 chr19 46700046 46703258 + 7.46032630575048 NA 3' UTR (NM_025563, exon 5 of 5) 3' UTR (NM_025563, exon 5 of 5) -5791 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak1_40_137_0.852918808287257_7.5349838609218_7.46026384592925 chr5 115237950 115238496 + 7.46026384592925 NA exon (NM_026398, exon 3 of 6) exon (NM_026398, exon 3 of 6) 2372 NM_026398 117109 Mm.24636 NM_026398 ENSMUSG00000060152 Pop5 1500019J17Rik|2700077E03Rik|AW049989|Rnasep3 processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae) protein-coding common_peak2_18_194_-1.00696611035272_7.10384725857325_7.45829276927303 chr1 160397163 160398101 + 7.45829276927303 NA intron (NM_013862, intron 17 of 20) intron (NM_013862, intron 17 of 20) -46061 NM_001038621 29809 Mm.25833 NM_013862 ENSMUSG00000026721 Rabgap1l 5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471 RAB GTPase activating protein 1-like protein-coding common_peak2_435_3999_0.179182573240261_12.0553755712822_7.4581578528261 chr9 65540460 65547545 + 7.4581578528261 NA Intergenic B2_Mm2|SINE|B2 36085 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_22_230_-0.913288237322547_7.39510492275478_7.45587845424025 chr6 72549369 72549862 + 7.45587845424025 NA promoter-TSS (NM_001271395) promoter-TSS (NM_001271395) -32 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_41_143_0.834161953542543_7.58700597821358_7.45489778371814 chr5 43841245 43842145 + 7.45489778371814 NA intron (NM_009763, intron 8 of 8) intron (NM_009763, intron 8 of 8) 22802 NM_009763 12182 Mm.246332 NM_009763 ENSMUSG00000029082 Bst1 114/A10|A530073F09|BP-3|Bp3|Bsta1|CD157|Ly65 bone marrow stromal cell antigen 1 protein-coding common_peak1_41_143_0.834161953542543_7.58700597821358_7.45489778371814 chr4 123139313 123140038 + 7.45489778371814 NA intron (NM_019489, intron 1 of 9) intron (NM_019489, intron 1 of 9) 266 NM_019489 56031 Mm.126873 NM_019489 ENSMUSG00000028651 Ppie 2010010D16Rik|Cyp33 peptidylprolyl isomerase E (cyclophilin E) protein-coding common_peak1_25_257_-0.855806010782322_7.58332425003209_7.45489778371814 chr11 46304193 46304819 + 7.45489778371814 NA intron (NM_001252459, intron 1 of 30) intron (NM_001252459, intron 1 of 30) 7852 NM_001252460 76884 Mm.154358 NM_133769 ENSMUSG00000020340 Cyfip2 1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168 cytoplasmic FMR1 interacting protein 2 protein-coding common_peak2_38_375_-0.681645402069777_8.21376615064275_7.45460217347541 chr7 19870581 19872045 + 7.45460217347541 NA Intergenic Intergenic -10014 NM_001033419 330483 Mm.260192 NM_001033419 ENSMUSG00000014686 Ceacam16 Gm769 carcinoembryonic antigen-related cell adhesion molecule 16 protein-coding common_peak2_86_440_0.508162985108331_9.03871633811169_7.45452559800417 chr11 55204241 55205073 + 7.45452559800417 NA intron (NM_153139, intron 1 of 10) intron (NM_153139, intron 1 of 10) 317 NM_153139 215335 Mm.35732 NM_153139 ENSMUSG00000020261 Slc36a1 5830411H19Rik|AI839897|Pat1 solute carrier family 36 (proton/amino acid symporter), member 1 protein-coding common_peak1_26_265_-0.833074868661594_7.63874500117039_7.454217563183 chr9 21424123 21424720 + 7.454217563183 NA promoter-TSS (NM_001253894) promoter-TSS (NM_001253894) -487 NM_007871 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding common_peak1_306_3402_-0.208400164064873_11.6283913539326_7.4524797526875 chr12 54694993 54697029 + 7.4524797526875 NA promoter-TSS (NM_025456) promoter-TSS (NM_025456) -146 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding unique_peak2_8_107_-1.47681445147716_6.01648027642489_7.45147630442827 chr11 71004672 71005310 + 7.45147630442827 NA promoter-TSS (NM_178367) promoter-TSS (NM_178367) -559 NM_178367 216877 Mm.35399 NM_178367 ENSMUSG00000040620 Dhx33 3110057P17Rik|9430096J02Rik|Ddx33 DEAH (Asp-Glu-Ala-His) box polypeptide 33 protein-coding common_peak1_118_691_0.412444142602919_9.64085029893818_7.45139275272708 chr4 106803951 106805595 + 7.45139275272708 NA Intergenic Intergenic -4942 NM_025590 329910 Mm.222956 NM_025590 ENSMUSG00000034853 Acot11 1110020M10Rik|2010309H15Rik|AW060409|BFIT|BFIT1|Thea|Them1|mKIAA0707 acyl-CoA thioesterase 11 protein-coding common_peak1_35_347_-0.711645822789706_8.08712058445388_7.45112723264756-2 chr14 74847272 74847805 + 7.45112723264756 NA intron (NM_001252132, intron 2 of 18) intron (NM_001252132, intron 2 of 18) 100339 NM_001252132 380916 Mm.288868 NM_001033439 ENSMUSG00000068015 Lrch1 4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding common_peak1_35_347_-0.711645822789706_8.08712058445388_7.45112723264756 chr12 110756686 110757290 + 7.45112723264756 NA intron (NM_027149, intron 1 of 2) RMER15|LTR|ERVL 19039 NM_027149 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding common_peak2_35_347_-0.711645822789706_8.08712058445388_7.45112723264756 chr10 67636296 67637523 + 7.45112723264756 NA Intergenic Intergenic -87954 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding unique_peak1_18_33_1.51290136214655_5.84391352232361_7.4501118718888-2 chr8 125078632 125079141 + 7.4501118718888 NA intron (NM_174853, intron 1 of 11) intron (NM_174853, intron 1 of 11) 24691 NM_174854 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding unique_peak1_18_33_1.51290136214655_5.84391352232361_7.4501118718888 chr14 46816695 46817223 + 7.4501118718888 NA intron (NM_022023, intron 2 of 6) intron (NM_022023, intron 2 of 6) 5283 NM_022023 63985 Mm.87312 NM_022023 ENSMUSG00000062014 Gmfb 3110001H22Rik|3110001O16Rik|AI851627|C79176|D14Ertd630e glia maturation factor, beta protein-coding common_peak1_360_3123_0.201745650272057_11.710051563278_7.44919202044515 chr7 104313607 104316237 + 7.44919202044515 NA promoter-TSS (NR_040749) promoter-TSS (NR_040749) -109 NR_040749 622070 Mm.486406 NR_040749 ENSMUSG00000087175 Gm15133 OTTMUSG00000019186 predicted gene 15133 ncRNA common_peak1_31_90_1.01507093411283_7.01533010725511_7.4478998781025 chr1 138252187 138252830 + 7.4478998781025 NA Intergenic Lx5|LINE|L1 -21230 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_33_329_-0.736173642085289_7.99823539320317_7.44680159089469 chr13 93814434 93815219 + 7.44680159089469 NA intron (NM_009712, intron 4 of 7) intron (NM_009712, intron 4 of 7) 24049 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak2_131_1325_-0.342320490078997_10.2017048150731_7.44661596386733 chr9 106169982 106172207 + 7.44661596386733 NA 5' UTR (NM_029896, exon 1 of 9) 5' UTR (NM_029896, exon 1 of 9) 165 NM_029896 77305 Mm.265125 NM_029896 ENSMUSG00000020257 Wdr82 9430077D24Rik|CDW5/WDR82 WD repeat domain containing 82 protein-coding common_peak1_160_1054_0.338969629764431_10.2125120984768_7.4465781374304 chr1 156615012 156616591 + 7.4465781374304 NA intron (NM_001136104, intron 1 of 12) intron (NM_001136104, intron 1 of 12) 57014 NM_001136104 11352 Mm.329515 NM_009595 ENSMUSG00000026596 Abl2 AA536808|Abll|Arg v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) protein-coding common_peak2_179_1229_0.314960659710742_10.421922930082_7.44599962889338 chr19 45659140 45661071 + 7.44599962889338 NA promoter-TSS (NM_013907) promoter-TSS (NM_013907) 88 NM_013907 30838 Mm.254739 NM_013907 ENSMUSG00000040913 Fbxw4 Dac|Fbw4|SHFM3|SHSF3|dactylin|dactylyn F-box and WD-40 domain protein 4 protein-coding unique_peak1_22_49_1.29460461431879_6.29115849693412_7.44523301021347-2 chr15 84167816 84168269 + 7.44523301021347 NA promoter-TSS (NR_105816) promoter-TSS (NR_105816) 226 NM_054088 116939 Mm.390817 NM_054088 ENSMUSG00000041653 Pnpla3 Adpn patatin-like phospholipase domain containing 3 protein-coding common_peak1_22_49_1.29460461431879_6.29115849693412_7.44523301021347 chr11 97138634 97139098 + 7.44523301021347 NA exon (NM_198100, exon 8 of 9) exon (NM_198100, exon 8 of 9) 7553 NR_106094 102466822 NR_106094 ENSMUSG00000099286 Mir7235 Gm27986|mmu-mir-7235 microRNA 7235 ncRNA unique_peak1_22_49_1.29460461431879_6.29115849693412_7.44523301021347 chr12 79191272 79191660 + 7.44523301021347 NA intron (NM_021557, intron 1 of 6) intron (NM_021557, intron 1 of 6) 353 NM_021557 17252 Mm.291799 NM_021557 ENSMUSG00000066441 Rdh11 2610319N22Rik|AI428145|AU045252|Arsdr1|C85936|CGI-82|HCBP12|M42C60|Mdt1|Psdr1|SCALD|UBE-1c1|Ube-1c retinol dehydrogenase 11 protein-coding common_peak1_22_49_1.29460461431879_6.29115849693412_7.44523301021347-4 chr5 125056084 125056550 + 7.44523301021347 NA intron (NM_001253904, intron 17 of 47) intron (NM_001253904, intron 17 of 47) 52842 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_22_49_1.29460461431879_6.29115849693412_7.44523301021347-3 chr17 23193484 23194039 + 7.44523301021347 NA promoter-TSS (NM_009555) promoter-TSS (NM_009555) -533 NM_009555 22700 Mm.437934 NM_009555 ENSMUSG00000002617 Zfp40 CTfin12|NTfin12|Zfp-40 zinc finger protein 40 protein-coding common_peak1_22_49_1.29460461431879_6.29115849693412_7.44523301021347-2 chr15 100688593 100689168 + 7.44523301021347 NA promoter-TSS (NM_033612) promoter-TSS (NM_033612) -960 NM_033612 109901 Mm.2131 NM_033612 ENSMUSG00000023031 Cela1 1810009A17Rik|1810062B19Rik|Ela-1|Ela1|PC-TsF chymotrypsin-like elastase family, member 1 protein-coding common_peak2_84_827_-0.441845109646833_9.47256440267591_7.44401371244681 chr9 44133156 44136681 + 7.44401371244681 NA intron (NM_023061, intron 1 of 15) CpG 260 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding unique_peak1_25_62_1.17814132114102_6.56635058407042_7.443975696746 chr4 75262161 75262859 + 7.443975696746 NA Intergenic Intergenic 15776 NM_025849 66928 Mm.24332 NM_025849 ENSMUSG00000028398 Tmem261 1700027K24Rik|3110001D03Rik transmembrane protein 261 protein-coding common_peak2_26_66_1.15611837638182_6.64414837864868_7.442863920757 chr2 114200858 114201522 + 7.442863920757 NA intron (NM_175466, intron 1 of 1) CpG 242 NM_175466 228491 Mm.132523 NM_175466 ENSMUSG00000040321 Zfp770 6430601A21Rik|Znf770 zinc finger protein 770 protein-coding common_peak1_26_66_1.15611837638182_6.64414837864868_7.442863920757 chr2 178518577 178519113 + 7.442863920757 NA Intergenic Intergenic 88330 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak1_304_2500_0.224335695744321_11.4004571900531_7.44038564453456 chr15 83171047 83173166 + 7.44038564453456 NA intron (NM_029787, intron 1 of 8) CpG 102 NM_029787 109754 Mm.22560 NM_029787 ENSMUSG00000018042 Cyb5r3 0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3 cytochrome b5 reductase 3 protein-coding common_peak1_20_212_-0.95723497642734_7.25609213201217_7.43949579770836 chr11 107295771 107296416 + 7.43949579770836 NA intron (NM_145823, intron 5 of 9) intron (NM_145823, intron 5 of 9) -106712 NM_001161329 68979 Mm.294617 NM_133702 ENSMUSG00000018433 Nol11 1500002M01Rik|AU015220|AU019874 nucleolar protein 11 protein-coding unique_peak2_23_238_-0.887091339888654_7.45732113803642_7.43798123188123 chr11 117291884 117293565 + 7.43798123188123 NA intron (NM_001113487, intron 2 of 10) intron (NM_001113487, intron 2 of 10) 26478 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_46_451_-0.61704787498917_8.5116550249206_7.43735656690149 chr2 85013034 85015046 + 7.43735656690149 NA intron (NM_145526, intron 8 of 11) intron (NM_145526, intron 8 of 11) 21794 NM_145526 228139 Mm.440375 NM_145526 ENSMUSG00000027071 P2rx3 4930513E20Rik|P2X3 purinergic receptor P2X, ligand-gated ion channel, 3 protein-coding common_peak1_204_2155_-0.264592610808759_10.9418451573481_7.43555466560811 chr7 73594420 73597076 + 7.43555466560811 NA Intergenic Intergenic -37353 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_109_1087_-0.379559511678067_9.89768308541131_7.43551042772348 chr9 21435278 21436453 + 7.43551042772348 NA intron (NM_007871, intron 1 of 19) URR1A|DNA|hAT-Charlie 10957 NM_001039520 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding common_peak2_84_426_0.513549588232001_8.99486705373649_7.43508747392885 chr1 131278767 131280349 + 7.43508747392885 NA promoter-TSS (NM_019777) promoter-TSS (NM_019777) 5 NM_019777 56489 Mm.386783 NM_019777 ENSMUSG00000042349 Ikbke AW558201|IKK-i|IKKepsilon|Ikki inhibitor of kappaB kinase epsilon protein-coding common_peak2_112_642_0.426844570844453_9.54209721275017_7.43315735937621 chr8 121199521 121202174 + 7.43315735937621 NA Intergenic Intergenic 73162 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak1_51_202_0.716697638642112_8.02368473650623_7.43307693951383 chr6 87042865 87043547 + 7.43307693951383 NA intron (NM_013528, intron 1 of 18) intron (NM_013528, intron 1 of 18) 360 NM_013528 14583 Mm.19893 NM_013528 ENSMUSG00000029992 Gfpt1 2810423A18Rik|AI324119|AI449986|GFA|GFAT|GFAT1|GFAT1m|Gfpt glutamine fructose-6-phosphate transaminase 1 protein-coding common_peak1_60_586_-0.53269724206308_8.93086807207851_7.43277953633014-2 chr17 94833954 94835310 + 7.43277953633014 NA intron (NR_045964, intron 1 of 3) intron (NR_045964, intron 1 of 3) 167 NR_045964 100038746 Mm.456686 NR_045963 ENSMUSG00000066057 Gm1976 100038868 predicted gene 1976 ncRNA common_peak1_60_586_-0.53269724206308_8.93086807207851_7.43277953633014 chr17 23802232 23803099 + 7.43277953633014 NA promoter-TSS (NM_175229) promoter-TSS (NM_175229) -522 NM_175229 75956 Mm.5222 NM_175229 ENSMUSG00000039218 Srrm2 5033413A03Rik|AA410130|SRm300|mKIAA0324 serine/arginine repetitive matrix 2 protein-coding common_peak2_97_961_-0.406404535673001_9.70669081593354_7.43265053068597 chr7 130827481 130829572 + 7.43265053068597 NA Intergenic Intergenic -37384 NM_133942 101476 Mm.323554 NM_133942 ENSMUSG00000040268 Plekha1 AA960558|C920009D07Rik|TAPP1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 protein-coding common_peak1_36_357_-0.704032126052846_8.13179971423783_7.43243623586232 chr6 113650748 113651700 + 7.43243623586232 NA intron (NM_001113553, intron 2 of 11) intron (NM_001113553, intron 2 of 11) 12757 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding common_peak2_564_5601_0.151898816976214_12.5276756765626_7.43170017007349 chr10 60346258 60353109 + 7.43170017007349 NA intron (NM_001159572, intron 1 of 6) intron (NM_001159572, intron 1 of 6) 2832 NM_028732 74048 Mm.273584 NM_028732 ENSMUSG00000020101 Vsir 4632428N05Rik|Dies1|PD-1H|VISTA V-set immunoregulatory receptor protein-coding common_peak2_203_1458_0.290131231582277_10.655829783709_7.43137829401771 chr3 90247292 90249212 + 7.43137829401771 NA promoter-TSS (NM_013901) promoter-TSS (NM_013901) 60 NM_013901 30791 Mm.294709 NM_013901 ENSMUSG00000052310 Slc39a1 Zip1|Zirtl solute carrier family 39 (zinc transporter), member 1 protein-coding common_peak1_33_100_0.971937089408732_7.14418002745616_7.4312296805894 chr2 128376199 128377022 + 7.4312296805894 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 52741 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA unique_peak2_45_441_-0.622829444111566_8.47648783733565_7.42874501712391 chr11 51931143 51932970 + 7.42874501712391 NA Intergenic Intergenic -35575 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_50_489_-0.588967161875114_8.64215435806501_7.4279950723262 chr5 139149175 139150047 + 7.4279950723262 NA promoter-TSS (NM_001081265) promoter-TSS (NM_001081265) -612 NM_001081265 433956 Mm.5547 NM_001081265 ENSMUSG00000025857 Dnaaf5 BC053401|C76907|Heatr2 dynein, axonemal assembly factor 5 protein-coding common_peak2_103_1024_-0.392762327379165_9.80502703070323_7.42642796026347 chr14 66185095 66187828 + 7.42642796026347 NA intron (NM_172498, intron 5 of 29) intron (NM_172498, intron 5 of 29) 27091 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_230_1725_0.267639307747395_10.8870364030527_7.42632326013325 chr8 25200418 25202382 + 7.42632326013325 NA 5' UTR (NM_199323, exon 1 of 11) 5' UTR (NM_199323, exon 1 of 11) 142 NM_199323 320165 Mm.308452 NM_177089 ENSMUSG00000065954 Tacc1 4833447E04Rik|AA960202|B230378H13Rik transforming, acidic coiled-coil containing protein 1 protein-coding common_peak1_92_909_-0.418906014198468_9.62026972798682_7.42504849325122 chr7 45459274 45460953 + 7.42504849325122 NA promoter-TSS (NM_010240) promoter-TSS (NM_010240) -227 NM_010240 14325 Mm.30357 NM_010240 ENSMUSG00000050708 Ftl1 Ftl|Ftl-1|L-ferritin ferritin light polypeptide 1 protein-coding common_peak2_92_909_-0.418906014198468_9.62026972798682_7.42504849325122 chr4 155161900 155164378 + 7.42504849325122 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 59396 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding unique_peak2_6_90_-1.67445451255348_5.67056738392196_7.42487886257553 chr11 83272261 83272772 + 7.42487886257553 NA Intergenic B2_Mm2|SINE|B2 14210 NM_001166028 237890 Mm.297670 NM_001166028 ENSMUSG00000082101 Slfn14 Gm20|Slfn14-ps schlafen 14 protein-coding common_peak1_37_121_0.89623917702036_7.37885692607307_7.42479098444866 chr15 28080594 28081379 + 7.42479098444866 NA Intergenic MLT1A1|LTR|ERVL-MaLR -55138 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding unique_peak2_37_121_0.89623917702036_7.37885692607307_7.42479098444866 chr13 52821264 52822398 + 7.42479098444866 NA Intergenic Intergenic -64626 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak2_37_121_0.89623917702036_7.37885692607307_7.42479098444866 chr2 32078362 32079228 + 7.42479098444866 NA intron (NM_175511, intron 1 of 1) intron (NM_175511, intron 1 of 1) 4910 NM_175511 241303 Mm.250441 NM_175511 ENSMUSG00000050592 Fam78a A130092J06Rik family with sequence similarity 78, member A protein-coding common_peak2_78_382_0.540898509188359_8.85164983651914_7.42475313030373 chr3 131138920 131140614 + 7.42475313030373 NA intron (NM_001276402, intron 3 of 9) intron (NM_001276402, intron 3 of 9) 26976 NM_001276403 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding unique_peak2_27_274_-0.816723058394096_7.69492627921497_7.42358378803616 chr4 155570796 155572206 + 7.42358378803616 NA intron (NM_001159637, intron 1 of 11) intron (NM_001159637, intron 1 of 11) 7686 NM_001159637 192185 Mm.28347 NM_138671 ENSMUSG00000029063 Nadk 4432404C02Rik|BC004012 NAD kinase protein-coding common_peak2_116_675_0.416198529478962_9.60897870102166_7.42109630185597 chr2 18821271 18822555 + 7.42109630185597 NA Intergenic Intergenic -20095 NR_131254 66774 Mm.87075 NR_131254 ENSMUSG00000097638 Carlr 4933439G12Rik|Carl cardiac and apoptosis-related long non-coding RNA ncRNA common_peak2_478_4522_0.168350827077028_12.2272396941699_7.42020814125306 chr12 80129602 80133239 + 7.42020814125306 NA intron (NR_033514, intron 2 of 2) URR1B|DNA|hAT-Charlie 1424 NR_033514 69548 Mm.269712 NR_033514 ENSMUSG00000097729 2310015A10Rik 5330419I17Rik RIKEN cDNA 2310015A10 gene ncRNA common_peak1_46_172_0.768502859789293_7.81887965753137_7.41944232802516 chr16 18836361 18837138 + 7.41944232802516 NA exon (NM_001033164, exon 2 of 3) exon (NM_001033164, exon 2 of 3) 169 NM_001033164 72307 Mm.36907 NM_001033164 ENSMUSG00000071632 2510002D24Rik 2410043I01Rik|AA163535|AA409624|DXMgi27 RIKEN cDNA 2510002D24 gene protein-coding common_peak1_100_547_0.45881611064493_9.32744013828299_7.41935094346576 chr7 100844627 100845641 + 7.41935094346576 NA TTS (NM_177073) TTS (NM_177073) 18279 NM_177073 320100 Mm.40336 NM_177073 ENSMUSG00000008318 Relt E430021K24Rik|Tnfrsf19l RELT tumor necrosis factor receptor protein-coding common_peak1_191_2002_-0.274334304161544_10.8307795537319_7.41828033112992 chr17 35865694 35868460 + 7.41828033112992 NA 5' UTR (NM_175242, exon 1 of 3) 5' UTR (NM_175242, exon 1 of 3) 462 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding common_peak2_74_354_0.558474493897622_8.75091246134086_7.41723084567136 chr14 55478522 55479709 + 7.41723084567136 NA intron (NM_001037938, intron 1 of 7) intron (NM_001037938, intron 1 of 7) 357 NM_030686 28200 Mm.27427 NM_030686 ENSMUSG00000022210 Dhrs4 AI043103|AI790593|CR|D14Ucla2|NDRD|PHCR|PSCD|RRD|mouNRDR dehydrogenase/reductase (SDR family) member 4 protein-coding common_peak1_87_448_0.502450730325517_9.0617969999039_7.41707921161202 chr11 60210598 60211698 + 7.41707921161202 NA intron (NM_011480, intron 1 of 18) intron (NM_011480, intron 1 of 18) -8821 NR_105887 102465556 NR_105887 ENSMUSG00000099259 Mir6922 Gm27269|mmu-mir-6922 microRNA 6922 ncRNA common_peak2_555_5487_0.153144636992501_12.4986370846691_7.41377036410196 chr11 116432317 116441878 + 7.41377036410196 NA intron (NR_003376, intron 3 of 3) intron (NR_003376, intron 3 of 3) 2884 NR_003376 664849 Mm.258466 NR_003376 Gm7367 EG664849 1110014K08Rik pseudogene pseudo common_peak2_101_1002_-0.395822802298369_9.772194489463_7.4135909581989 chr5 76946501 76948839 + 7.4135909581989 NA intron (NM_172146, intron 1 of 10) intron (NM_172146, intron 1 of 10) -3741 NM_025939 67054 Mm.182931 NM_025939 ENSMUSG00000029247 Paics 2610511I09Rik|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase protein-coding common_peak2_288_2328_0.231773579357734_11.3013817138897_7.41322914020795 chr5 33628187 33630848 + 7.41322914020795 NA 5' UTR (NM_178390, exon 1 of 6) 5' UTR (NM_178390, exon 1 of 6) 118 NM_178390 74504 Mm.294695 NM_178390 ENSMUSG00000037339 Fam53a 2410018C17Rik|5430419M09Rik|Dntnp family with sequence similarity 53, member A protein-coding unique_peak2_3_62_-2.13425128274746_4.91015428212619_7.41155390117348 chrX 32503920 32504507 + 7.41155390117348 NA Intergenic Intergenic -55842 NM_001168334 100040482 Mm.479861 NM_001168334 ENSMUSG00000096194 Btbd35f2 Gm2799 BTB domain containing 35, family member 2 protein-coding common_peak2_264_2074_0.244951731199786_11.1413714867215_7.41010977393293 chr5 21259527 21265701 + 7.41010977393293 NA intron (NM_175437, intron 19 of 30) intron (NM_175437, intron 19 of 30) 76347 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_264_2074_0.244951731199786_11.1413714867215_7.41010977393293 chr13 17694990 17696336 + 7.41010977393293 NA promoter-TSS (NM_138654) promoter-TSS (NM_138654) 250 NM_025479 66308 Mm.291109 NM_025479 ENSMUSG00000012429 Mplkip 2810021B07Rik|C330007M08Rik|Ttdn1 M-phase specific PLK1 intereacting protein protein-coding common_peak2_104_1034_-0.389834821709869_9.82049764153175_7.41008407977519 chr2 158704335 158708084 + 7.41008407977519 NA intron (NM_153089, intron 2 of 10) intron (NM_153089, intron 2 of 10) 39074 NM_001159662 228852 Mm.150540 NM_153089 ENSMUSG00000037754 Ppp1r16b ANKRD4|C130078N17Rik|TIMAP|Wdt4 protein phosphatase 1, regulatory (inhibitor) subunit 16B protein-coding common_peak1_71_694_-0.482959183365491_9.19938957592812_7.40944460161292 chr16 38713889 38714622 + 7.40944460161292 NA Intergenic MER102b|DNA|hAT-Charlie -1220 NM_020260 12549 Mm.370848 NM_020260 ENSMUSG00000022799 Arhgap31 5830477L08Rik|AU041750|Cdgap|D330026I07Rik Rho GTPase activating protein 31 protein-coding unique_peak1_20_41_1.38515722101974_6.08489603328863_7.40837379257048 chr1 88096428 88096851 + 7.40837379257048 NA intron (NM_201642, intron 1 of 4) intron (NM_201642, intron 1 of 4) 1638 NM_201642 394432 Mm.300095 NM_201642 ENSMUSG00000090124 Ugt1a7c A10'|A13|Ugt1a10 UDP glucuronosyltransferase 1 family, polypeptide A7C protein-coding common_peak1_20_41_1.38515722101974_6.08489603328863_7.40837379257048 chr16 52127553 52128031 + 7.40837379257048 NA intron (NM_001033238, intron 4 of 17) intron (NM_001033238, intron 4 of 17) 96243 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak2_191_1343_0.301294978872404_10.542964912215_7.40756172851883 chr1 36938624 36940701 + 7.40756172851883 NA promoter-TSS (NM_018872) promoter-TSS (NM_018872) -135 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding common_peak2_21_220_-0.928104816697481_7.32385015104269_7.40722786698199 chr11 6444701 6445424 + 7.40722786698199 NA promoter-TSS (NM_029938) promoter-TSS (NM_029938) -619 NM_029938 77605 Mm.27624 NM_029938 ENSMUSG00000041126 H2afv C530002L11Rik|H2a.z-2|H2av H2A histone family, member V protein-coding common_peak2_75_734_-0.468011613954124_9.28759463274666_7.4055584107822 chr9 80265408 80267723 + 7.4055584107822 NA intron (NM_001039546, intron 16 of 32) intron (NM_001039546, intron 16 of 32) 101531 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding common_peak2_88_867_-0.428532863680291_9.54728480060433_7.40464864946248 chr15 78405664 78407292 + 7.40464864946248 NA promoter-TSS (NM_001162492) promoter-TSS (NM_001162492) -234 NM_001162493 246221 Mm.294215 NM_138670 ENSMUSG00000071711 Mpst Mst mercaptopyruvate sulfurtransferase protein-coding common_peak1_52_507_-0.572942921329053_8.70221322610764_7.40306222346971 chr10 45002783 45003726 + 7.40306222346971 NA Intergenic Intergenic -63960 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak1_151_975_0.349463799393071_10.1054692372594_7.39959018865595 chr2 91264542 91266055 + 7.39959018865595 NA TTS (NM_028733) TTS (NM_028733) 183 NM_023854 77038 Mm.43636 NM_023854 ENSMUSG00000027255 Arfgap2 2310032E02Rik|Zfp289 ADP-ribosylation factor GTPase activating protein 2 protein-coding common_peak2_28_283_-0.801083804992113_7.74920521700862_7.39920184740362 chr11 103016388 103017196 + 7.39920184740362 NA intron (NM_026551, intron 1 of 4) intron (NM_026551, intron 1 of 4) 355 NM_026551 68087 Mm.277449 NM_026551 ENSMUSG00000020935 Dcakd 3010024O21Rik|6720485C15Rik|AI849483 dephospho-CoA kinase domain containing protein-coding common_peak2_131_1324_-0.341232074304333_10.2011606071858_7.39837397231995 chr6 47835231 47837015 + 7.39837397231995 NA intron (NM_173034, intron 1 of 4) CpG 462 NM_027477 272347 Mm.169059 NM_027477 ENSMUSG00000062519 Zfp398 5730513I23Rik zinc finger protein 398 protein-coding common_peak1_48_469_-0.599640709654315_8.57669659173784_7.39790541297621 chr18 74282280 74283194 + 7.39790541297621 NA promoter-TSS (NM_028948) promoter-TSS (NM_028948) -363 NR_029424 74453 Mm.182293 NM_028948 ENSMUSG00000035394 Cfap53 4933415I03Rik|Ccdc11 cilia and flagella associated protein 53 protein-coding common_peak2_48_469_-0.599640709654315_8.57669659173784_7.39790541297621 chr6 128972031 128974222 + 7.39790541297621 NA intron (NM_001316752, intron 1 of 5) L1MA6|LINE|L1 1769 NR_106107 102465757 NR_106107 ENSMUSG00000098359 Mir7649 mmu-mir-7649 microRNA 7649 ncRNA common_peak2_77_755_-0.462686663426854_9.33089909250764_7.39733074437697 chr13 21721066 21722729 + 7.39733074437697 NA promoter-TSS (NM_178200) promoter-TSS (NM_178200) -147 NM_178200 319186 Mm.277425 NM_178200 ENSMUSG00000096807 Hist1h2bm H2b-291b histone cluster 1, H2bm protein-coding common_peak2_43_422_-0.638103799239643_8.40546195350013_7.39697069392617 chr13 95963043 95965008 + 7.39697069392617 NA intron (NM_029210, intron 12 of 12) intron (NM_029210, intron 12 of 12) -72103 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding unique_peak2_5_81_-1.7970011588987_5.45905142516873_7.39665946828771-2 chr4 11160740 11161360 + 7.39665946828771 NA intron (NM_021897, intron 1 of 3) intron (NM_021897, intron 1 of 3) 4609 NM_021897 60599 Mm.393018 NM_021897 ENSMUSG00000028211 Trp53inp1 2700057G22Rik|SIP|SIP18|SIP27|Stinp|Teap transformation related protein 53 inducible nuclear protein 1 protein-coding unique_peak2_5_81_-1.7970011588987_5.45905142516873_7.39665946828771 chr17 49413105 49413679 + 7.39665946828771 NA Intergenic MTE2b|LTR|ERVL-MaLR -14972 NM_028464 56738 Mm.22256 NM_020042 ENSMUSG00000064120 Mocs1 3110045D15Rik|AI043170|AW536397 molybdenum cofactor synthesis 1 protein-coding unique_peak2_5_81_-1.7970011588987_5.45905142516873_7.39665946828771-3 chr8 123017837 123018627 + 7.39665946828771 NA intron (NR_037865, intron 1 of 13) intron (NR_037865, intron 1 of 13) 24052 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_96_950_-0.407963167497154_9.68931994711199_7.39604749245427 chr6 48802946 48804623 + 7.39604749245427 NA Intergenic RLTR33|LTR|ERVK -32933 NM_031247 83408 Mm.333050 NM_031247 ENSMUSG00000039264 Gimap3 2010110D23Rik|Gimap5|Ian4 GTPase, IMAP family member 3 protein-coding common_peak1_184_1920_-0.279752565575796_10.7677655208776_7.39595555599487 chr1 138301208 138303223 + 7.39595555599487 NA Intergenic MTD|LTR|ERVL-MaLR 28477 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_101_555_0.455342015590306_9.34661208051866_7.3953624543192 chr2 91526710 91527450 + 7.3953624543192 NA Intergenic CpG -19242 NM_001165989 75786 Mm.168478 NM_029437 ENSMUSG00000040549 Ckap5 3110043H24Rik|4930432B04Rik|D730027C18Rik|T25636|mKIAA0097 cytoskeleton associated protein 5 protein-coding unique_peak2_11_132_-1.26811927859545_6.42122279620346_7.39496560385873 chr5 148863565 148864591 + 7.39496560385873 NA Intergenic Intergenic 64569 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak1_225_2403_-0.249089371352428_11.106676495035_7.39427404073339 chr17 35263046 35264500 + 7.39427404073339 NA intron (NM_001267808, intron 6 of 10) CpG-6316 650 NM_001267808 14980 Mm.439675 NM_001267808 H2-L H-2L histocompatibility 2, D region locus L protein-coding common_peak1_66_644_-0.502611650160892_9.08184952523017_7.39421531566849 chrX 130549007 130550092 + 7.39421531566849 NA Intergenic Intergenic 799807 NM_172493 54004 Mm.10763 NM_017398 ENSMUSG00000034480 Diaph2 Dia3|Diap2|Drf2|E430022I22Rik diaphanous related formin 2 protein-coding common_peak2_279_3062_-0.219447003516354_11.4710061498408_7.3932678262387 chr18 10180422 10182874 + 7.3932678262387 NA 5' UTR (NM_009071, exon 1 of 33) 5' UTR (NM_009071, exon 1 of 33) 144 NM_009071 19877 Mm.6710 NM_009071 ENSMUSG00000024290 Rock1 1110055K06Rik|Rock-I Rho-associated coiled-coil containing protein kinase 1 protein-coding common_peak2_107_603_0.437027449887228_9.45691846426869_7.39201072290065 chr19 34601221 34602872 + 7.39201072290065 NA promoter-TSS (NM_001101605) promoter-TSS (NM_001101605) -78 NM_001101605 667373 Mm.371956 NM_001101605 ENSMUSG00000079339 Ifit1bl1 Gm14446|Ifit1c|OTTMUSG00000016644 interferon induced protein with tetratricpeptide repeats 1B like 1 protein-coding unique_peak2_14_159_-1.13988397347601_6.75198610814935_7.39148805076398 chr11 106784873 106786250 + 7.39148805076398 NA intron (NM_007840, intron 5 of 12) intron (NM_007840, intron 5 of 12) -2802 NR_037224 100526469 NR_037224 ENSMUSG00000093273 Mir3064 mir-3064|mmu-mir-3064 microRNA 3064 ncRNA common_peak1_235_1776_0.263523061385861_10.9269894967216_7.39077152217155 chr5 134638309 134639592 + 7.39077152217155 NA intron (NM_001312867, intron 1 of 5) CpG 459 NM_001312867 22384 Mm.27955 NM_033561 ENSMUSG00000040731 Eif4h AU018978|D5Ertd355e|E430026L18Rik|Ef4h|Wbscr1|Wscr1|eIF-4H eukaryotic translation initiation factor 4H protein-coding common_peak2_123_1237_-0.353888772107245_10.0968512131606_7.38850795601746 chrX 20616386 20618712 + 7.38850795601746 NA promoter-TSS (NM_145627) promoter-TSS (NM_145627) 15 NM_019435 104130 Mm.30084 NM_019435 ENSMUSG00000031059 Ndufb11 D5Bwg0566e|D5Bwg0577e|NP15.6|Np15 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11 protein-coding common_peak1_56_233_0.674133999966768_8.20743171956679_7.38812098697008 chr15 25269013 25269692 + 7.38812098697008 NA Intergenic Intergenic 144412 NM_027395 70350 Mm.29586 NM_027395 ENSMUSG00000045763 Basp1 2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding common_peak1_24_247_-0.868181118250491_7.52010575126163_7.38782689847323 chr15 100304042 100304621 + 7.38782689847323 NA promoter-TSS (NM_027334) promoter-TSS (NM_027334) -486 NM_027334 70152 Mm.488086 NM_027334 ENSMUSG00000054619 Mettl7a1 2210414H16Rik|3300001H21Rik|Aam-B|Mettl7a|UbiE1 methyltransferase like 7A1 protein-coding common_peak2_327_3667_-0.199497724970559_11.7410290611098_7.38756137032953 chrX 48137768 48144717 + 7.38756137032953 NA Intergenic Intergenic -5194 NM_001313749 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding common_peak2_119_1194_-0.360913847897695_10.0423379789193_7.38735439556231 chr9 111137016 111140866 + 7.38735439556231 NA intron (NM_001164838, intron 2 of 14) intron (NM_001164838, intron 2 of 14) 20830 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding common_peak2_449_4170_0.174718938740083_12.1135370662593_7.38488793997005 chr14 26636593 26639988 + 7.38488793997005 NA promoter-TSS (NM_007479) promoter-TSS (NM_007479) 93 NM_007479 11843 Mm.297768 NM_007479 ENSMUSG00000021877 Arf4 AA407803 ADP-ribosylation factor 4 protein-coding common_peak2_27_71_1.11663974857561_6.72824487573012_7.38374953089918 chr3 28781272 28781833 + 7.38374953089918 NA intron (NM_177586, intron 1 of 4) CpG 241 NM_177586 208691 Mm.193670 NM_177586 ENSMUSG00000050192 Eif5a2 9630038B20|eIF5AII eukaryotic translation initiation factor 5A2 protein-coding common_peak1_27_71_1.11663974857561_6.72824487573012_7.38374953089918 chr4 62654733 62655333 + 7.38374953089918 NA intron (NM_134257, intron 10 of 15) intron (NM_134257, intron 10 of 15) -18941 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_170_1147_0.323726309027771_10.3267700811896_7.38331084227516 chr7 139247098 139249745 + 7.38331084227516 NA promoter-TSS (NM_001098636) promoter-TSS (NM_001098636) -61 NM_001033206 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_141_887_0.365355990683268_9.97709386169174_7.38171952360232 chr7 49092272 49093683 + 7.38171952360232 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 133904 NM_001111016 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak1_68_664_-0.494615210141758_9.12990292531767_7.38154868359917 chr8 121949566 121950701 + 7.38154868359917 NA promoter-TSS (NM_001285983) promoter-TSS (NM_001285983) -359 NM_016812 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak1_161_1065_0.334962671420058_10.2254730584692_7.38105165572526 chr8 122313898 122316297 + 7.38105165572526 NA intron (NM_009569, intron 3 of 9) intron (NM_009569, intron 3 of 9) 32956 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_211_1537_0.282126599853997_10.7279030878888_7.37990472745162 chr6 140623307 140625252 + 7.37990472745162 NA promoter-TSS (NM_001309437) promoter-TSS (NM_001309437) -630 NM_001309437 11569 Mm.86453 NM_009637 ENSMUSG00000030232 Aebp2 AU023766|B230313N05Rik AE binding protein 2 protein-coding common_peak2_208_1508_0.28436852599806_10.7015613535257_7.37987652646322 chr1 24677505 24679725 + 7.37987652646322 NA promoter-TSS (NM_026719) promoter-TSS (NM_026719) 71 NM_026719 68421 Mm.336563 NM_026719 ENSMUSG00000073725 Lmbrd1 0910001K20Rik|AV347960 LMBR1 domain containing 1 protein-coding common_peak1_144_1467_-0.322867351452324_10.3582025771171_7.374223739061 chr2 150304711 150307022 + 7.374223739061 NA Intergenic Intergenic 48349 NM_001142410 100216455 Mm.484816 NM_001142410 ENSMUSG00000079008 Gm14124 EG640962|ENSMUSG00000074735|Gm10749|OTTMUSG00000015734 predicted gene 14124 protein-coding common_peak2_78_764_-0.457216846466698_9.35070751434667_7.37370186258648 chr2 134643058 134644710 + 7.37370186258648 NA exon (NM_029148, exon 1 of 8) exon (NM_029148, exon 1 of 8) 237 NM_029148 52837 Mm.264096 NM_029148 ENSMUSG00000034723 Tmx4 2810417D04Rik|4930500L08Rik|AI843224|AW046784|D2Bwg1356e|Txndc13|mKIAA1162 thioredoxin-related transmembrane protein 4 protein-coding unique_peak2_13_150_-1.17845230049351_6.64917858907832_7.3734774489245 chrX 106703892 106704730 + 7.3734774489245 NA intron (NM_001033541, intron 3 of 3) intron (NM_001033541, intron 3 of 3) -100632 NM_001281859 58861 Mm.287166 NM_021476 ENSMUSG00000052821 Cysltr1 BB147369|CysLT1R|Cyslt1 cysteinyl leukotriene receptor 1 protein-coding common_peak2_439_4050_0.177065582258548_12.0725951608157_7.37345883069667 chr4 126101786 126105153 + 7.37345883069667 NA promoter-TSS (NM_001145827) promoter-TSS (NM_001145827) -488 NM_028800 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding unique_peak2_12_141_-1.22093818605011_6.53927802647963_7.37312731163547 chrX 48594058 48594529 + 7.37312731163547 NA promoter-TSS (NM_001166648) promoter-TSS (NM_001166648) 80 NM_001166648 208968 Mm.293819 NM_153532 ENSMUSG00000036916 Zfp280c BC028839|Suhw3|Zfp633|Znf280c|mKIAA1584 zinc finger protein 280C protein-coding common_peak1_70_684_-0.486800632000872_9.17655986184745_7.37305238600771 chr17 35968969 35969890 + 7.37305238600771 NA intron (NM_013854, intron 1 of 22) CpG 321 NM_013854 224742 Mm.329022 NM_013854 ENSMUSG00000038762 Abcf1 AU041969|Abc50|D17Wsu166e|GCN20 ATP-binding cassette, sub-family F (GCN20), member 1 protein-coding common_peak1_87_856_-0.430129029045837_9.52808687958958_7.37096752247664 chr17 56764749 56765459 + 7.37096752247664 NA intron (NM_144858, intron 1 of 12) intron (NM_144858, intron 1 of 12) 353 NM_144858 224907 Mm.293973 NM_144858 ENSMUSG00000007603 Dus3l AI662135|AW557805 dihydrouridine synthase 3-like (S. cerevisiae) protein-coding common_peak2_167_1725_-0.295905171821389_10.6052641632683_7.37081907348721 chr5 93149998 93153840 + 7.37081907348721 NA intron (NM_001310669, intron 3 of 10) intron (NM_001310669, intron 3 of 10) 54576 NM_017367 12453 Mm.250419 NM_017367 ENSMUSG00000063015 Ccni - cyclin I protein-coding common_peak2_129_1302_-0.344094537048882_10.1755741000437_7.36849814449864 chr14 50806732 50808680 + 7.36849814449864 NA promoter-TSS (NM_009632) promoter-TSS (NM_009632) 65 NR_002142 85029 NR_002142 ENSMUSG00000092837 Rpph1 Gm24821|H1RNA|Rmrp5|Rpr ribonuclease P RNA component H1 ncRNA common_peak1_72_704_-0.479160420900527_9.22189923683589_7.36834022316154 chr7 80339799 80340871 + 7.36834022316154 NA promoter-TSS (NM_133952) promoter-TSS (NM_133952) -116 NM_133952 101869 Mm.243024 NM_133952 ENSMUSG00000030533 Unc45a AW538196 unc-45 myosin chaperone A protein-coding common_peak1_168_1736_-0.294568190180982_10.6150979436199_7.36772826368828 chr4 48073156 48076148 + 7.36772826368828 NA intron (NM_015743, intron 7 of 7) intron (NM_015743, intron 7 of 7) 23406 NM_001307989 18124 Mm.247261 NM_015743 ENSMUSG00000028341 Nr4a3 AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC nuclear receptor subfamily 4, group A, member 3 protein-coding common_peak2_262_2054_0.245518340706417_11.1276818489223_7.36680539324699 chr4 41313582 41315608 + 7.36680539324699 NA 5' UTR (NM_026893, exon 1 of 9) 5' UTR (NM_026893, exon 1 of 9) 306 NM_026893 68970 Mm.28891 NM_026893 ENSMUSG00000028436 Dcaf12 1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a DDB1 and CUL4 associated factor 12 protein-coding common_peak1_30_301_-0.771722534590772_7.85254347202969_7.3666166622406 chr5 77092030 77092675 + 7.3666166622406 NA intron (NM_175606, intron 2 of 2) intron (NM_175606, intron 2 of 2) 2915 NM_001159901 74318 Mm.181852 NM_175606 ENSMUSG00000059325 Hopx 1110018K11Rik|1200015P04Rik|2300002F06Rik|AI848177|AW490897|Cameo|Hdop|Hod|Hop|Ob1|Obl|Toto HOP homeobox protein-coding common_peak1_38_374_-0.677803335775383_8.21184511749555_7.36438101849488-2 chr3 88492180 88492986 + 7.36438101849488 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) 729 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_38_374_-0.677803335775383_8.21184511749555_7.36438101849488 chr11 72440805 72441467 + 7.36438101849488 NA promoter-TSS (NM_016776) promoter-TSS (NM_016776) -242 NM_016776 18432 Mm.147946 NM_016776 ENSMUSG00000040463 Mybbp1a AL024407|AU019902|P160|p160MBP|p67MBP MYB binding protein (P160) 1a protein-coding common_peak2_38_374_-0.677803335775383_8.21184511749555_7.36438101849488 chr4 119319976 119321203 + 7.36438101849488 NA promoter-TSS (NM_001110129) promoter-TSS (NM_001110129) -66 NM_001110130 66101 Mm.304080 NM_028677 ENSMUSG00000060288 Ppih 1100001J08Rik|2010111B15Rik|4833408F11Rik|AI464484|CYP-20|CYPH|D4Wsu43e peptidyl prolyl isomerase H protein-coding common_peak1_477_4512_0.167845762066445_12.2237939442457_7.36115313342176 chr15 38299021 38302103 + 7.36115313342176 NA exon (NM_013692, exon 1 of 4) exon (NM_013692, exon 1 of 4) 149 NM_013692 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding unique_peak1_15_23_1.71129076240401_5.44060788192316_7.361152474024-2 chr11 117686818 117687284 + 7.361152474024 NA intron (NM_198022, intron 1 of 21) intron (NM_198022, intron 1 of 21) 32762 NM_198022 217351 Mm.40272 NM_198022 ENSMUSG00000025571 Tnrc6c 9930033H14Rik|mKIAA1582 trinucleotide repeat containing 6C protein-coding unique_peak1_15_23_1.71129076240401_5.44060788192316_7.361152474024-3 chr12 80846459 80846847 + 7.361152474024 NA intron (NM_178682, intron 2 of 5) intron (NM_178682, intron 2 of 5) 56121 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding unique_peak1_15_23_1.71129076240401_5.44060788192316_7.361152474024 chr11 70721008 70721427 + 7.361152474024 NA intron (NM_153103, intron 18 of 22) intron (NM_153103, intron 18 of 22) 15227 NR_105890 102465557 NR_105890 ENSMUSG00000105932 Mir6925 mmu-mir-6925 microRNA 6925 ncRNA common_peak1_65_634_-0.506680522812292_9.05727252025338_7.36093248189343 chr13 43398264 43398982 + 7.36093248189343 NA exon (NM_023554, exon 1 of 8) exon (NM_023554, exon 1 of 8) 247 NM_023554 70078 Mm.439927 NM_023554 ENSMUSG00000063200 Nol7 2210008F15Rik|5730556I21Rik|NOP27|RARG-1 nucleolar protein 7 protein-coding common_peak1_60_585_-0.530237403375276_8.92963815273461_7.36051539417794 chr7 127243598 127244429 + 7.36051539417794 NA promoter-TSS (NM_177362) promoter-TSS (NM_177362) -513 NM_177362 244216 Mm.41038 NM_177362 ENSMUSG00000054716 Zfp771 G630024C07Rik|Znf771 zinc finger protein 771 protein-coding common_peak2_95_939_-0.409516856100192_9.6717585185149_7.35961260389002 chr11 108242872 108245297 + 7.35961260389002 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 99804 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_35_346_-0.707494179519237_8.08504476281864_7.35741726819251 chr7 3288855 3290400 + 7.35741726819251 NA promoter-TSS (NM_001093765) promoter-TSS (NM_001093765) 589 NM_001093764 50918 Mm.29874 NM_016969 ENSMUSG00000068566 Myadm D7Wsu62e myeloid-associated differentiation marker protein-coding common_peak2_220_2342_-0.251600062814131_11.0683412074561_7.35716019878473 chr9 106821025 106823539 + 7.35716019878473 NA intron (NM_001015507, intron 1 of 22) CpG 306 NM_001015507 321006 Mm.440089 NM_001015507 ENSMUSG00000040325 Vprbp AI447437|B930007L02Rik|mKIAA0800 Vpr (HIV-1) binding protein protein-coding common_peak2_39_384_-0.670968096765131_8.2532305871997_7.35678341598347 chr11 45955069 45955839 + 7.35678341598347 NA promoter-TSS (NM_001290737) promoter-TSS (NM_001290737) 49 NM_001080969 66628 Mm.269083 NM_001080969 ENSMUSG00000011254 Thg1l - tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) protein-coding common_peak2_84_427_0.510174861451345_8.99655441712682_7.35046711603025 chr12 73718554 73721459 + 7.35046711603025 NA intron (NM_001313977, intron 10 of 14) intron (NM_001313977, intron 10 of 14) 135210 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak2_158_1038_0.338896342692186_10.1904281102503_7.35017211283694 chr15 99701514 99703087 + 7.35017211283694 NA promoter-TSS (NM_031842) promoter-TSS (NM_031842) 13 NM_031842 83797 Mm.273756 NM_031842 ENSMUSG00000023018 Smarcd1 AA407987|Baf60a|D15Kz1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 protein-coding common_peak1_136_1378_-0.333069184979122_10.2628721490244_7.3488518227461 chr16 93245291 93247673 + 7.3488518227461 NA Intergenic Intergenic 106707 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak1_62_604_-0.519182172210174_8.98120024605687_7.34877862393034 chr3 115672977 115674028 + 7.34877862393034 NA Intergenic Intergenic 41553 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding common_peak1_328_2766_0.212560268081532_11.5403870626507_7.34688111155656 chr3 61363197 61366120 + 7.34688111155656 NA 5' UTR (NM_028712, exon 1 of 1) 5' UTR (NM_028712, exon 1 of 1) 151 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding unique_peak2_25_256_-0.850203304552947_7.58052289691741_7.34629736391722 chr13 112000041 112001200 + 7.34629736391722 NA Intergenic MIRb|SINE|MIR 132684 NR_130345 102636620 Mm.402328 NR_130345 ENSMUSG00000086111 Gm15326 OTTMUSG00000020187 predicted gene 15326 ncRNA unique_peak2_25_256_-0.850203304552947_7.58052289691741_7.34629736391722-2 chr15 81818805 81819883 + 7.34629736391722 NA intron (NM_153484, intron 2 of 3) B1_Mur3|SINE|Alu 7930 NM_017376 21685 Mm.270278 NM_017376 ENSMUSG00000022389 Tef 2310028D20Rik thyrotroph embryonic factor protein-coding common_peak1_25_256_-0.850203304552947_7.58052289691741_7.34629736391722 chr11 106487922 106488476 + 7.34629736391722 NA promoter-TSS (NM_023913) promoter-TSS (NM_023913) -403 NM_023913 78943 Mm.340943 NM_023913 ENSMUSG00000020715 Ern1 9030414B18Rik|AI225830|C85377|Ire1a|Ire1alpha|Ire1p endoplasmic reticulum (ER) to nucleus signalling 1 protein-coding common_peak1_364_3172_0.198792807346312_11.7310282095908_7.34622132120511 chr7 127477788 127480109 + 7.34622132120511 NA Intergenic CpG -6273 NM_010183 14123 Mm.323505 NM_010183 ENSMUSG00000042423 Fbrs Fbs|Fbs1 fibrosin protein-coding common_peak1_45_440_-0.619561730277656_8.47485398041869_7.34560216543617 chr12 17372992 17373937 + 7.34560216543617 NA intron (NM_001008421, intron 11 of 20) intron (NM_001008421, intron 11 of 20) 18072 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA common_peak2_100_548_0.456185854600259_9.32875526630533_7.34465465644205 chr2 166805456 166806483 + 7.34465465644205 NA intron (NM_001085495, intron 1 of 38) CpG 388 NM_001085495 99371 Mm.297192 NM_001085495 ENSMUSG00000074582 Arfgef2 AI463430|AW493672|BIG2|E230011G24Rik ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) protein-coding common_peak1_168_1129_0.32570679122686_10.304960452916_7.3439790604759 chr15 64311449 64313528 + 7.3439790604759 NA 5' UTR (NM_001276463, exon 1 of 28) 5' UTR (NM_001276463, exon 1 of 28) 185 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_68_313_0.587974571355167_8.58860803456921_7.34289705419382 chr12 25351030 25353197 + 7.34289705419382 NA Intergenic Intergenic 222939 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_278_2223_0.236010164317367_11.2369461548822_7.34155547433525 chr11 60113148 60116699 + 7.34155547433525 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) 9910 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak1_169_1138_0.324702127330736_10.3159030953735_7.34047103576821 chr6 72346672 72348065 + 7.34047103576821 NA promoter-TSS (NM_026696) promoter-TSS (NM_026696) 51 NM_026696 68364 Mm.52711 NM_026696 ENSMUSG00000058706 0610030E20Rik 1500031N04Rik|2810411C16Rik|AI461894 RIKEN cDNA 0610030E20 gene protein-coding common_peak1_132_1334_-0.338723713912556_10.2132621696186_7.33871064382793 chr2 32725092 32726578 + 7.33871064382793 NA intron (NR_045535, intron 2 of 12) MTC|LTR|ERVL-MaLR -1854 NM_001252547 27387 Mm.9593 NM_013781 ENSMUSG00000059013 Sh2d3c Chat|Nsp3|Shep1 SH2 domain containing 3C protein-coding common_peak1_28_76_1.08187677381767_6.80772492760373_7.33851316393579 chr19 29324838 29325365 + 7.33851316393579 NA exon (NM_013754, exon 1 of 2) exon (NM_013754, exon 1 of 2) 217 NM_013754 27356 Mm.306511 NM_013754 ENSMUSG00000050957 Insl6 RIF1 insulin-like 6 protein-coding common_peak1_28_76_1.08187677381767_6.80772492760373_7.33851316393579-2 chr8 119810930 119811507 + 7.33851316393579 NA intron (NM_028071, intron 3 of 3) intron (NM_028071, intron 3 of 3) 29361 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak2_28_76_1.08187677381767_6.80772492760373_7.33851316393579 chr19 29324826 29325355 + 7.33851316393579 NA exon (NM_013754, exon 1 of 2) exon (NM_013754, exon 1 of 2) 228 NM_013754 27356 Mm.306511 NM_013754 ENSMUSG00000050957 Insl6 RIF1 insulin-like 6 protein-coding common_peak1_44_430_-0.625365421524467_8.43886134832687_7.33812478918812 chr17 12960202 12960792 + 7.33812478918812 NA intron (NM_009338, intron 1 of 8) CpG 228 NM_009338 110460 Mm.439711 NM_009338 ENSMUSG00000023832 Acat2 AW742799|Tcp-1x|Tcp1-rs1 acetyl-Coenzyme A acetyltransferase 2 protein-coding common_peak1_467_5522_-0.160933823937205_12.3507695001025_7.33515026995753 chr6 128836328 128839845 + 7.33515026995753 NA Intergenic Intergenic -11771 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak2_463_5467_-0.161684968348068_12.335955043432_7.33479520238041 chr10 80157163 80163733 + 7.33479520238041 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -7393 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak2_276_2202_0.236966269346647_11.2237369143742_7.33459745504255 chr11 58007945 58011218 + 7.33459745504255 NA intron (NM_028451, intron 1 of 18) CpG 517 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_535_6465_-0.148277158417294_12.5845192129174_7.33392148495131 chr7 73554943 73560294 + 7.33392148495131 NA intron (NR_037569, intron 1 of 4) intron (NR_037569, intron 1 of 4) 777 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_102_1012_-0.392870575024398_9.78798317128894_7.3333643016747 chr5 140607251 140608356 + 7.3333643016747 NA exon (NM_008494, exon 1 of 8) exon (NM_008494, exon 1 of 8) 462 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding unique_peak1_19_37_1.44320671418719_5.96953087053718_7.3330023287796 chr11 54959547 54960107 + 7.3330023287796 NA intron (NM_001199275, intron 1 of 18) B4|SINE|B4 3113 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding unique_peak1_19_37_1.44320671418719_5.96953087053718_7.3330023287796-3 chr9 56531984 56532419 + 7.3330023287796 NA Intergenic Intergenic 103447 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding unique_peak1_19_37_1.44320671418719_5.96953087053718_7.3330023287796-2 chr7 84779263 84779713 + 7.3330023287796 NA Intergenic L1MD2|LINE|L1 -74083 NM_146415 258410 Mm.484702 NM_146415 ENSMUSG00000070460 Olfr291 MOR254-2 olfactory receptor 291 protein-coding common_peak2_92_487_0.480079383324703_9.17077702922524_7.33061189251446 chr1 57969226 57970309 + 7.33061189251446 NA promoter-TSS (NR_027630) promoter-TSS (NR_027630) -243 NR_027630 51960 Mm.339711 NM_030211 ENSMUSG00000054770 Kctd18 4932411A20Rik|6530404F10Rik potassium channel tetramerisation domain containing 18 protein-coding common_peak1_502_4822_0.16221634516376_12.3168232673438_7.33031258271573 chr3 58414044 58417431 + 7.33031258271573 NA promoter-TSS (NM_001081229) promoter-TSS (NM_001081229) 48 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak1_167_1724_-0.295069069195327_10.6048461119552_7.32873959148058 chr1 53790677 53792972 + 7.32873959148058 NA Intergenic Intergenic -6609 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak1_588_5915_0.146836052652384_12.6038243634253_7.32847541711352 chr17 21472561 21476266 + 7.32847541711352 NA Intergenic Intergenic -14575 NM_013843 24132 Mm.42140 NM_013843 ENSMUSG00000057409 Zfp53 D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8 zinc finger protein 53 protein-coding common_peak2_64_624_-0.510797859216552_9.03231344994117_7.32816354633555 chr6 125214872 125216529 + 7.32816354633555 NA 5' UTR (NM_009496, exon 1 of 5) 5' UTR (NM_009496, exon 1 of 5) 119 NM_001080557 22317 Mm.32321 NM_009496 ENSMUSG00000030337 Vamp1 Syb-1|Syb1|VAMP-1|lew vesicle-associated membrane protein 1 protein-coding common_peak2_76_369_0.545340080256754_8.80405150064469_7.32808562255087 chr7 99545651 99546870 + 7.32808562255087 NA intron (NM_177231, intron 1 of 15) intron (NM_177231, intron 1 of 15) -6009 NR_029760 723840 NR_029760 ENSMUSG00000065571 Mir326 Mirn326|mir-326|mmu-mir-326 microRNA 326 ncRNA common_peak1_110_628_0.427001960485407_9.51041718712199_7.32793628939516 chr4 48046112 48048138 + 7.32793628939516 NA intron (NM_015743, intron 1 of 7) intron (NM_015743, intron 1 of 7) 1820 NM_015743 18124 Mm.247261 NM_015743 ENSMUSG00000028341 Nr4a3 AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC nuclear receptor subfamily 4, group A, member 3 protein-coding common_peak1_120_1203_-0.357052832124253_10.0550932606976_7.32753023448646 chr18 82559049 82560647 + 7.32753023448646 NA intron (NM_001025258, intron 1 of 4) intron (NM_001025258, intron 1 of 4) 5340 NM_001025254 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_161_1066_0.333609933354809_10.2261494275018_7.32752795679666 chr2 172976686 172978886 + 7.32752795679666 NA Intergenic Intergenic -2056 NM_012046 26972 Mm.23495 NM_012046 ENSMUSG00000005883 Spo11 AI449549|Spo11a|Spo11b SPO11 meiotic protein covalently bound to DSB protein-coding common_peak2_159_1633_-0.303221106955839_10.5225817146678_7.32549250257863 chr6 124930129 124932239 + 7.32549250257863 NA promoter-TSS (NM_001170341) promoter-TSS (NM_001170341) -204 NM_145385 30853 Mm.29737 NM_145385 ENSMUSG00000030120 Mlf2 AI256856|AU018944|C77284 myeloid leukemia factor 2 protein-coding common_peak1_94_928_-0.411064996107442_9.65400228832893_7.32335209002747 chr17 13007678 13008993 + 7.32335209002747 NA exon (NM_013671, exon 2 of 5) exon (NM_013671, exon 2 of 5) 496 NM_013671 20656 Mm.290876 NM_013671 ENSMUSG00000006818 Sod2 MnSOD|Sod-2 superoxide dismutase 2, mitochondrial protein-coding common_peak2_356_4039_-0.188932691246231_11.885673232016_7.32257215711984 chr13 37618600 37623255 + 7.32257215711984 NA Intergenic Intergenic -205111 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_134_1355_-0.334828309418429_10.2377273084271_7.32251869586198 chr7 4136296 4137510 + 7.32251869586198 NA promoter-TSS (NR_033548) promoter-TSS (NR_033548) 23 NR_033548 100037396 Mm.447887 NR_033548 ENSMUSG00000085886 D030047H15Rik Gm15924|OTTMUSG00000027889 RIKEN cDNA D030047H15 gene ncRNA common_peak2_95_510_0.469820609527186_9.23208978570121_7.32150382312574 chr12 69986191 69987705 + 7.32150382312574 NA promoter-TSS (NM_022028) promoter-TSS (NM_022028) 54 NM_022028 64010 Mm.390480 NM_022028 ENSMUSG00000021067 Sav1 1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4 salvador family WW domain containing 1 protein-coding common_peak2_107_604_0.434640857050351_9.45811176068713_7.32097108824223 chr17 47293204 47296034 + 7.32097108824223 NA intron (NM_001097623, intron 5 of 19) intron (NM_001097623, intron 5 of 19) 64389 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak1_20_211_-0.950445810764701_7.25269754918085_7.32033663705593 chr11 95413415 95413992 + 7.32033663705593 NA promoter-TSS (NM_025287) promoter-TSS (NM_025287) -380 NM_025287 20747 Mm.285454 NM_025287 ENSMUSG00000057522 Spop AI315626|Pcif1|TEF2 speckle-type POZ protein protein-coding common_peak1_97_959_-0.403402047511477_9.70518957185278_7.31976332000939 chr5 122232398 122233913 + 7.31976332000939 NA intron (NM_028752, intron 2 of 6) intron (NM_028752, intron 2 of 6) 22868 NM_028752 74096 Mm.28804 NM_028752 ENSMUSG00000064267 Hvcn1 0610039P13Rik|AI450555|BTS|HV1|Vsop.|mVSOP hydrogen voltage-gated channel 1 protein-coding unique_peak2_27_273_-0.811467332942602_7.69229841648923_7.31855977368779 chr4 46403549 46405202 + 7.31855977368779 NA promoter-TSS (NM_053149) promoter-TSS (NM_053149) -192 NM_053149 93966 Mm.25793 NM_053149 ENSMUSG00000028332 Hemgn 4921524M03Rik|AI317176|EDAG|Hgn|mNDR hemogen protein-coding common_peak1_27_273_-0.811467332942602_7.69229841648923_7.31855977368779-2 chr17 23828363 23828959 + 7.31855977368779 NA intron (NM_026305, intron 2 of 3) CpG 448 NM_026305 67673 Mm.153758 NM_026305 ENSMUSG00000055839 Elob 0610040H15Rik|Tceb2 elongin B protein-coding common_peak1_27_273_-0.811467332942602_7.69229841648923_7.31855977368779-4 chr3 19257691 19258291 + 7.31855977368779 NA intron (NM_008802, intron 2 of 12) L2a|LINE|L2 7017 NM_008802 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak1_27_273_-0.811467332942602_7.69229841648923_7.31855977368779-3 chr2 3423382 3423938 + 7.31855977368779 NA promoter-TSS (NM_001110214) promoter-TSS (NM_001110214) -471 NM_146114 227525 Mm.23483 NM_146114 ENSMUSG00000026648 Dclre1c 9930121L06Rik|AI661365|Art|Snm1l DNA cross-link repair 1C protein-coding common_peak1_27_273_-0.811467332942602_7.69229841648923_7.31855977368779 chr12 86819327 86820016 + 7.31855977368779 NA Intergenic ORR1C1|LTR|ERVL-MaLR 65143 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_48_468_-0.596567875604691_8.57516017471303_7.31742449157804 chr10 82047514 82048904 + 7.31742449157804 NA promoter-TSS (NM_001024626) promoter-TSS (NM_001024626) 82 NM_001024626 408062 Mm.391409 NM_001024626 ENSMUSG00000061371 Zfp873 - zinc finger protein 873 protein-coding common_peak1_103_1022_-0.389944562731685_9.80361814837949_7.31708986176787 chr15 76722719 76723996 + 7.31708986176787 NA TTS (NM_001168288) TTS (NM_001168288) 488 NM_145472 223665 Mm.291713 NM_145472 ENSMUSG00000033707 C030006K11Rik 1110033I13Rik RIKEN cDNA C030006K11 gene protein-coding common_peak1_500_4798_0.162363024125048_12.3096996097787_7.31583111500504 chr1 191395547 191398250 + 7.31583111500504 NA 5' UTR (NM_144880, exon 1 of 13) 5' UTR (NM_144880, exon 1 of 13) 143 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak2_54_221_0.686875152035809_8.13785344236801_7.31532251884155 chr10 8123067 8124785 + 7.31532251884155 NA Intergenic Tigger20a|DNA|TcMar-Tigger -167803 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_40_138_0.842502192341918_7.54019216889447_7.31244620551488 chr1 75435934 75436475 + 7.31244620551488 NA intron (NM_133708, intron 1 of 12) intron (NM_133708, intron 1 of 12) 261 NM_133708 69080 Mm.23951 NM_133708 ENSMUSG00000033021 Gmppa 1810012N01Rik GDP-mannose pyrophosphorylase A protein-coding common_peak1_65_293_0.604259914010873_8.5018023018418_7.31142978981743 chr14 47540765 47541913 + 7.31142978981743 NA 3' UTR (NM_172599, exon 10 of 10) 3' UTR (NM_172599, exon 10 of 10) 27095 NM_172599 100504663 Mm.287279 NM_172599 ENSMUSG00000037526 Atg14 4832427M01|Atg14L|D14Ertd114e|D14Ertd436e autophagy related 14 protein-coding common_peak2_321_2690_0.214682548904921_11.5012679500929_7.31125740229078 chr8 109777938 109780194 + 7.31125740229078 NA intron (NM_009677, intron 1 of 23) CpG 483 NM_001301211 11765 Mm.37210 NM_009677 ENSMUSG00000031731 Ap1g1 AA409002|AU041323|AW551707|Adtg|D8Ertd374e adaptor protein complex AP-1, gamma 1 subunit protein-coding common_peak1_149_958_0.351375014457894_10.0810745122471_7.31015856428357 chr2 155236023 155237632 + 7.31015856428357 NA non-coding (NR_111890, exon 1 of 4) non-coding (NR_111890, exon 1 of 4) 219 NM_001291108 67068 Mm.23693 NM_025947 ENSMUSG00000047459 Dynlrb1 2010012N15Rik|2010320M17Rik|9430076K19Rik|AV124457|DNLC2A|Dncl2a|km23-1 dynein light chain roadblock-type 1 protein-coding common_peak2_110_1096_-0.375429643038498_9.91163298888394_7.30897999192389 chr4 139351722 139353245 + 7.30897999192389 NA promoter-TSS (NM_001039200) promoter-TSS (NM_001039200) 93 NM_001290810 69902 Mm.27871 NM_023536 ENSMUSG00000028741 Mrto4 2610012O22Rik|Mg684|Mrt4 mRNA turnover 4, ribosome maturation factor protein-coding common_peak2_80_784_-0.450206760786111_9.39144546338593_7.3083562446923 chr12 36036038 36038152 + 7.3083562446923 NA intron (NM_025359, intron 1 of 5) RMER4B|LTR|ERVK 5383 NM_025359 66109 Mm.254663 NM_025359 ENSMUSG00000020577 Tspan13 1100001I23Rik|NET-6|Tm4sf13 tetraspanin 13 protein-coding common_peak1_162_1667_-0.300059129523293_10.553874008683_7.30820868654 chr4 8802590 8805313 + 7.30820868654 NA intron (NM_001277149, intron 4 of 37) intron (NM_001277149, intron 4 of 37) 113545 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding unique_peak2_60_260_0.636613454477088_8.34621272380843_7.30781058520851 chrX 167037314 167039304 + 7.30781058520851 NA Intergenic (TAGA)n|Simple_repeat|Simple_repeat 32061 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak1_24_58_1.20337214277454_6.48432912074911_7.30742871301241 chr1 86266398 86266892 + 7.30742871301241 NA intron (NM_001310702, intron 23 of 24) B4A|SINE|B4 -36576 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding unique_peak1_24_58_1.20337214277454_6.48432912074911_7.30742871301241-3 chr5 134609903 134610490 + 7.30742871301241 NA intron (NM_022964, intron 1 of 11) intron (NM_022964, intron 1 of 11) 4829 NM_022964 56743 Mm.391375 NM_020044 ENSMUSG00000040751 Lat2 AW125574|LAB|NTAL|WSCR5|Wbscr15|Wbscr5 linker for activation of T cells family, member 2 protein-coding unique_peak1_24_58_1.20337214277454_6.48432912074911_7.30742871301241-2 chr5 113873317 113873794 + 7.30742871301241 NA intron (NM_011779, intron 2 of 10) intron (NM_011779, intron 2 of 10) 35151 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_24_58_1.20337214277454_6.48432912074911_7.30742871301241-2 chr11 55121223 55121723 + 7.30742871301241 NA Intergenic Intergenic 23488 NM_010299 14667 Mm.287807 NM_010299 ENSMUSG00000000594 Gm2a AA408702|AW215435|GM2-AP|SAP-3 GM2 ganglioside activator protein protein-coding unique_peak1_24_58_1.20337214277454_6.48432912074911_7.30742871301241 chr2 6352446 6353095 + 7.30742871301241 NA promoter-TSS (NM_181399) promoter-TSS (NM_181399) 34 NM_181399 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding common_peak2_313_2602_0.218128349187895_11.4550237709981_7.30719380901546 chr9 116174028 116176409 + 7.30719380901546 NA 5' UTR (NM_029575, exon 1 of 7) 5' UTR (NM_029575, exon 1 of 7) 145 NM_029575 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_29_81_1.05110442797962_6.88310421860789_7.30505797905994 chr5 31712683 31713393 + 7.30505797905994 NA intron (NM_181281, intron 2 of 10) B4A|SINE|B4 14988 NM_181282 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Bre 6030405P19Rik|AI429776|B830038C02Rik brain and reproductive organ-expressed protein protein-coding common_peak2_29_81_1.05110442797962_6.88310421860789_7.30505797905994 chr13 62623666 62624365 + 7.30505797905994 NA intron (NM_173381, intron 1 of 2) intron (NM_173381, intron 1 of 2) 167 NM_173381 211378 Mm.247448 NM_173381 ENSMUSG00000072066 6720489N17Rik 9330128I06 RIKEN cDNA 6720489N17 gene protein-coding common_peak2_288_2331_0.229916430368103_11.3023102883845_7.30449747415707 chr8 69900969 69903994 + 7.30449747415707 NA promoter-TSS (NM_023312) promoter-TSS (NM_023312) 77 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak2_137_854_0.36942702165989_9.92449412060321_7.30367016947248 chr11 57644399 57646221 + 7.30367016947248 NA promoter-TSS (NM_134189) promoter-TSS (NM_134189) -132 NM_134189 171212 Mm.271670 NM_134189 ENSMUSG00000020520 Galnt10 AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 protein-coding common_peak2_95_938_-0.407981257188966_9.67099071905929_7.30271008018674 chr4 135169336 135170878 + 7.30271008018674 NA intron (NM_019732, intron 4 of 5) intron (NM_019732, intron 4 of 5) 49462 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak1_118_1181_-0.359941949937888_10.0270433452086_7.30236939715794 chr5 8996385 8997787 + 7.30236939715794 NA promoter-TSS (NM_023733) promoter-TSS (NM_023733) 60 NM_023733 74114 Mm.28197 NM_023733 ENSMUSG00000003623 Crot 1200003H03Rik carnitine O-octanoyltransferase protein-coding common_peak1_297_3284_-0.210140341915714_11.5766074842518_7.29729394815374 chr6 127149046 127152581 + 7.29729394815374 NA 5' UTR (NM_009829, exon 1 of 5) 5' UTR (NM_009829, exon 1 of 5) 235 NM_009829 12444 Mm.333406 NM_009829 ENSMUSG00000000184 Ccnd2 2600016F06Rik|AI256817|BF642806|C86853|Vin-1|Vin1|cD2 cyclin D2 protein-coding common_peak2_28_282_-0.795994928319314_7.74666077867223_7.29600124352612 chr7 45017862 45018775 + 7.29600124352612 NA intron (NM_009101, intron 1 of 5) intron (NM_009101, intron 1 of 5) 311 NM_009101 20130 Mm.389894 NM_009101 ENSMUSG00000038387 Rras AI573426 related RAS viral (r-ras) oncogene protein-coding unique_peak1_17_30_1.55048905148579_5.72944083612977_7.2950340055246-2 chr6 54968569 54969079 + 7.2950340055246 NA intron (NM_172729, intron 1 of 11) intron (NM_172729, intron 1 of 11) 2837 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding unique_peak1_17_30_1.55048905148579_5.72944083612977_7.2950340055246 chr4 119129136 119129583 + 7.2950340055246 NA intron (NM_011400, intron 2 of 9) intron (NM_011400, intron 2 of 9) 20614 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_224_1668_0.269515985080353_10.8395262319028_7.29393503622477 chr1 159231197 159233531 + 7.29393503622477 NA promoter-TSS (NM_011931) promoter-TSS (NM_011931) 38 NM_011931 26374 Mm.328135 NM_011931 ENSMUSG00000040782 Rfwd2 AI316802|C80879|Cop1 ring finger and WD repeat domain 2 protein-coding common_peak2_38_127_0.872943449607861_7.43647172480393_7.29234173779862 chr10 93430603 93431443 + 7.29234173779862 NA Intergenic Intergenic -2084 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA common_peak2_38_127_0.872943449607861_7.43647172480393_7.29234173779862-2 chr5 21035228 21036455 + 7.29234173779862 NA intron (NM_011203, intron 1 of 17) intron (NM_011203, intron 1 of 17) 19956 NM_011203 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak1_65_633_-0.504406771292171_9.05613564449332_7.29178066781932 chr7 135659055 135660374 + 7.29178066781932 NA intron (NM_001316681, intron 4 of 17) intron (NM_001316681, intron 4 of 17) -7400 NR_015548 67765 Mm.445272 NR_015548 ENSMUSG00000097471 5830432E09Rik - RIKEN cDNA 5830432E09 gene ncRNA common_peak2_62_273_0.623577076991255_8.40982062145616_7.29169473995465 chr8 27127970 27129296 + 7.29169473995465 NA promoter-TSS (NM_025686) promoter-TSS (NM_025686) -1 NM_025686 66653 Mm.334467 NM_025686 ENSMUSG00000031487 Brf2 2700059M06Rik|5730512K07Rik|AU018504|AU022602|BRFU|TFIIIB50 BRF2, RNA polymerase III transcription initiation factor 50kDa subunit protein-coding common_peak1_443_4101_0.175031013257554_12.0896272831086_7.29074227626808 chr9 118081086 118084956 + 7.29074227626808 NA intron (NM_026442, intron 2 of 3) intron (NM_026442, intron 2 of 3) 42499 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding unique_peak2_15_167_-1.09606415965359_6.84428534295196_7.29056347516348 chr11 46215729 46217028 + 7.29056347516348 NA intron (NM_133769, intron 26 of 30) L1ME2|LINE|L1 -15757 NR_105955 102465598 NR_105955 ENSMUSG00000099230 Mir6989 Gm27885|mmu-mir-6989 microRNA 6989 ncRNA common_peak1_21_219_-0.921561970830709_7.32057872810931_7.29045608606303 chr6 90983801 90984275 + 7.29045608606303 NA Intergenic Intergenic 132788 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak2_262_2056_0.244114940750528_11.1283835489002_7.28980289976959 chr5 34572629 34575245 + 7.28980289976959 NA promoter-TSS (NR_106111) promoter-TSS (NR_106111) -214 NR_106111 102466999 NR_106111 ENSMUSG00000099082 Mir7036b Gm27625|mmu-mir-7036b microRNA 7036b ncRNA common_peak2_79_391_0.529649005888281_8.87953434705935_7.28922358800034 chr7 27258095 27259668 + 7.28922358800034 NA TTS (NM_133770) TTS (NM_133770) 120 NM_010950 18223 Mm.458153 NM_010950 ENSMUSG00000063160 Numbl nbl numb-like protein-coding common_peak1_293_2385_0.227244736555095_11.3340006959728_7.28919060888156 chr10 82984497 82987177 + 7.28919060888156 NA 5' UTR (NM_021439, exon 1 of 3) 5' UTR (NM_021439, exon 1 of 3) 340 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_60_584_-0.527773363423794_8.92840613275887_7.2885553974131 chr15 97821533 97822453 + 7.2885553974131 NA intron (NM_001204275, intron 1 of 24) intron (NM_001204275, intron 1 of 24) -7130 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_139_871_0.366486012119319_9.95142733083659_7.28693263749985 chr9 79758905 79760669 + 7.28693263749985 NA promoter-TSS (NM_009945) promoter-TSS (NM_009945) 66 NM_009945 12866 Mm.152627 NM_009945 ENSMUSG00000032330 Cox7a2 COX7AL|Cox7a3|CoxVIIa-L cytochrome c oxidase subunit VIIa 2 protein-coding common_peak2_116_677_0.411936502624801_9.61110971444874_7.28683542866788 chr17 46710737 46712710 + 7.28683542866788 NA exon (NM_145488, exon 1 of 17) exon (NM_145488, exon 1 of 17) 260 NM_145488 224824 Mm.299399 NM_145488 ENSMUSG00000002763 Pex6 AI132582|D130055I09Rik|mKIAA4177 peroxisomal biogenesis factor 6 protein-coding common_peak1_73_348_0.559312736188113_8.72673959430371_7.28624317409537 chr15 28158619 28159603 + 7.28624317409537 NA Intergenic Intergenic -44655 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding unique_peak2_19_201_-0.967077255121018_7.17467285519129_7.28522094660403 chr2 93190319 93191904 + 7.28522094660403 NA intron (NM_001025246, intron 1 of 7) (T)n|Simple_repeat|Simple_repeat 3527 NM_001025246 277414 Mm.41033 NM_001025246 ENSMUSG00000068735 Trp53i11 Tp53i11 transformation related protein 53 inducible protein 11 protein-coding common_peak1_19_201_-0.967077255121018_7.17467285519129_7.28522094660403 chr11 6444764 6445187 + 7.28522094660403 NA promoter-TSS (NM_029938) promoter-TSS (NM_029938) -532 NM_029938 77605 Mm.27624 NM_029938 ENSMUSG00000041126 H2afv C530002L11Rik|H2a.z-2|H2av H2A histone family, member V protein-coding common_peak1_160_1057_0.334873001244953_10.2145604127365_7.28512137980323 chr16 64850793 64851793 + 7.28512137980323 NA promoter-TSS (NM_178647) promoter-TSS (NM_178647) -792 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak2_211_2233_-0.25644708266749_10.9971899291496_7.28390093150926 chr9 108144165 108150977 + 7.28390093150926 NA intron (NM_007567, intron 1 of 11) intron (NM_007567, intron 1 of 11) 10716 NR_126077 76873 Mm.436935 NR_126077 ENSMUSG00000102224 4930447F24Rik - RIKEN cDNA 4930447F24 gene ncRNA common_peak2_477_4515_0.166887054505931_12.224273298026_7.28321100056777 chr6 86523862 86528375 + 7.28321100056777 NA promoter-TSS (NM_011865) promoter-TSS (NM_011865) 47 NM_011865 23983 Mm.274146 NM_011865 ENSMUSG00000051695 Pcbp1 WBP17|[a]CP-1|alphaCP-1|hnRNP E1 poly(rC) binding protein 1 protein-coding common_peak2_144_1465_-0.320900486742921_10.3572191447624_7.28310370745012 chr9 121674370 121678134 + 7.28310370745012 NA Intergenic PB1D10|SINE|Alu 28777 NM_001164562 215474 Mm.31421 NM_178677 ENSMUSG00000061536 Sec22c 4932412K21|5930407I15Rik|C530046H07|Sec22l3 SEC22 homolog C, vesicle trafficking protein protein-coding common_peak2_159_1632_-0.302337914371851_10.5221401183758_7.2823872050231 chr2 117445174 117448407 + 7.2823872050231 NA Intergenic Intergenic -103913 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_50_197_0.718314157047847_7.98851369860353_7.28211862632368 chr9 80164724 80165590 + 7.28211862632368 NA 5' UTR (NM_001039546, exon 1 of 33) 5' UTR (NM_001039546, exon 1 of 33) 123 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding common_peak2_30_86_1.02373870888558_6.95481285029152_7.28169195547122 chr14 75190106 75190760 + 7.28169195547122 NA intron (NM_008879, intron 2 of 16) intron (NM_008879, intron 2 of 16) -51854 NM_019775 56373 Mm.24242 NM_019775 ENSMUSG00000021999 Cpb2 1110032P04Rik|4930405E17Rik|AI255929|CPR|Cpu|TAFI carboxypeptidase B2 (plasma) protein-coding common_peak2_243_1860_0.255881733360532_10.9898032067394_7.28125032196604 chr13 51764661 51770377 + 7.28125032196604 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 26228 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_39_133_0.85165734835936_7.49191786463745_7.28113978764914 chr1 95572866 95573596 + 7.28113978764914 NA Intergenic Intergenic 94363 NM_009183 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak2_39_133_0.85165734835936_7.49191786463745_7.28113978764914 chr13 20120365 20121332 + 7.28113978764914 NA intron (NM_080288, intron 1 of 21) intron (NM_080288, intron 1 of 21) 30341 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding common_peak2_53_215_0.693932375862483_8.10185369009471_7.28087579415301 chr9 122886623 122887631 + 7.28087579415301 NA Intergenic CpG -1344 NM_001177505 382118 Mm.86999 NM_001177505 ENSMUSG00000063488 Zkscan7 BC042569|Zfp167 zinc finger with KRAB and SCAN domains 7 protein-coding common_peak2_29_291_-0.781168126282314_7.79924049573886_7.27890782133731 chr11 106083521 106084313 + 7.27890782133731 NA promoter-TSS (NM_011947) promoter-TSS (NM_011947) -985 NM_011947 26406 Mm.27041 NM_011947 ENSMUSG00000020700 Map3k3 AW548911|MAPKKK3|Mekk3|mKIAA4031 mitogen-activated protein kinase kinase kinase 3 protein-coding common_peak1_29_291_-0.781168126282314_7.79924049573886_7.27890782133731 chr15 97849356 97849940 + 7.27890782133731 NA Intergenic Intergenic -5146 NM_001204278 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding unique_peak2_24_246_-0.862352039448294_7.51719121186053_7.2776115928128 chr12 115165102 115166393 + 7.2776115928128 NA Intergenic Intergenic 530047 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA common_peak2_71_692_-0.478801557891835_9.1973107631913_7.27701226305628 chr6 67414603 67416596 + 7.27701226305628 NA Intergenic Intergenic -39462 NM_008354 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak1_109_1084_-0.375575997759571_9.89569132845206_7.27645240607778 chr8 33599324 33600484 + 7.27645240607778 NA 5' UTR (NM_017374, exon 1 of 7) 5' UTR (NM_017374, exon 1 of 7) 283 NM_017374 19053 Mm.29301 NM_017374 ENSMUSG00000009630 Ppp2cb AI115466|D8Ertd766e|PP2Ac protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform protein-coding common_peak1_134_1354_-0.333763982523319_10.2371951449796_7.27522660102362 chr6 83505940 83506993 + 7.27522660102362 NA intron (NM_001162521, intron 1 of 5) intron (NM_001162521, intron 1 of 5) 503 NM_013764 27369 Mm.42234 NM_013764 ENSMUSG00000014554 Dguok dGK|dGK1|dGK2|dGK3 deoxyguanosine kinase protein-coding common_peak2_333_2824_0.209323764684402_11.5686970345321_7.27312792407779 chr12 76304319 76310236 + 7.27312792407779 NA intron (NM_138745, intron 22 of 27) intron (NM_138745, intron 22 of 27) -17614 NM_001101471 238276 Mm.311452 NM_001101471 ENSMUSG00000021057 Akap5 3526401B18Rik|AKAP 150|AKAP-5|AKAP150|BB098886|Gm258|P150 A kinase (PRKA) anchor protein 5 protein-coding common_peak1_106_1052_-0.381319301669944_9.84963007019075_7.27168347945188 chr9 114731127 114732033 + 7.27168347945188 NA intron (NM_026036, intron 1 of 3) intron (NM_026036, intron 1 of 3) 377 NM_026036 67213 Mm.28858 NM_026036 ENSMUSG00000032434 Cmtm6 2810051A14Rik|AA536733|Cklfsf6 CKLF-like MARVEL transmembrane domain containing 6 protein-coding unique_peak1_14_20_1.78972669863259_5.28718077209505_7.27107407897114-3 chr8 124341558 124341940 + 7.27107407897114 NA intron (NM_139272, intron 15 of 15) intron (NM_139272, intron 15 of 15) 92187 NM_171824 209966 Mm.234233 NM_171824 ENSMUSG00000050751 Pgbd5 2900019M05Rik|AI854313 piggyBac transposable element derived 5 protein-coding common_peak1_14_20_1.78972669863259_5.28718077209505_7.27107407897114 chr14 19974428 19974787 + 7.27107407897114 NA intron (NM_001285908, intron 1 of 3) intron (NM_001285908, intron 1 of 3) 2086 NM_001285911 14702 Mm.41737 NM_010315 ENSMUSG00000043004 Gng2 - guanine nucleotide binding protein (G protein), gamma 2 protein-coding common_peak1_14_20_1.78972669863259_5.28718077209505_7.27107407897114-2 chr17 84890269 84890667 + 7.27107407897114 NA Intergenic B1_Mur4|SINE|Alu -66273 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding unique_peak1_14_20_1.78972669863259_5.28718077209505_7.27107407897114-2 chr4 141419589 141419994 + 7.27107407897114 NA promoter-TSS (NM_013868) promoter-TSS (NM_013868) -988 NM_013868 29818 Mm.46181 NM_013868 ENSMUSG00000006221 Hspb7 27kDa|Hsp25-2|cvHsp heat shock protein family, member 7 (cardiovascular) protein-coding unique_peak1_14_20_1.78972669863259_5.28718077209505_7.27107407897114 chr12 34680628 34681076 + 7.27107407897114 NA intron (NM_001271386, intron 3 of 27) intron (NM_001271386, intron 3 of 27) -151963 NM_024124 79221 Mm.310551 NM_024124 ENSMUSG00000004698 Hdac9 AV022454|D030072B18Rik|HD7B|HD9|HDRP|Hdac7b|Mitr|mKIAA0744 histone deacetylase 9 protein-coding common_peak1_237_1799_0.259903490208961_10.9437329363215_7.27059892854892 chr2 132577171 132578735 + 7.27059892854892 NA intron (NM_001291051, intron 1 of 18) CpG 295 NM_001291050 74182 Mm.211211 NM_027096 ENSMUSG00000027346 Gpcpd1 2310004G06Rik|2310032D16Rik|AU015213|Gde5|Prei4|mKIAA1434 glycerophosphocholine phosphodiesterase 1 protein-coding common_peak2_100_549_0.453560385193436_9.33006800100874_7.2704170621059 chr10 80292385 80293659 + 7.2704170621059 NA intron (NM_001310726, intron 2 of 3) B1_Mus1|SINE|Alu 513 NM_001310726 20054 Mm.643 NM_009091 ENSMUSG00000063457 Rps15 rig ribosomal protein S15 protein-coding common_peak1_100_549_0.453560385193436_9.33006800100874_7.2704170621059 chr2 166805451 166806454 + 7.2704170621059 NA intron (NM_001085495, intron 1 of 38) CpG 371 NM_001085495 99371 Mm.297192 NM_001085495 ENSMUSG00000074582 Arfgef2 AI463430|AW493672|BIG2|E230011G24Rik ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) protein-coding common_peak2_313_3485_-0.203268908533678_11.6657223998588_7.2699032572486 chr12 54694880 54697698 + 7.2699032572486 NA promoter-TSS (NM_025456) promoter-TSS (NM_025456) -424 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak1_39_383_-0.667215961904024_8.25135451976914_7.26821544285217 chr2 130274426 130275040 + 7.26821544285217 NA promoter-TSS (NR_028547) promoter-TSS (NR_028547) 321 NM_024193 67134 Mm.29363 NM_024193 ENSMUSG00000027405 Nop56 2310044F10Rik|Nol5a NOP56 ribonucleoprotein protein-coding common_peak1_356_4037_-0.188218308938547_11.8853160408622_7.26774710311398 chr10 58445281 58447815 + 7.26774710311398 NA promoter-TSS (NM_011240) promoter-TSS (NM_011240) -304 NM_011240 19386 Mm.431695 NM_011240 ENSMUSG00000003226 Ranbp2 A430087B05Rik|AI256741|NUP358 RAN binding protein 2 protein-coding common_peak2_338_2880_0.207300069165814_11.5960039797428_7.26708194944158 chr3 95817421 95820514 + 7.26708194944158 NA promoter-TSS (NM_001081293) promoter-TSS (NM_001081293) -14 NM_001081293 75137 Mm.196275 NM_028328 ENSMUSG00000028106 Rprd2 2810036A19Rik|4930535B03Rik|6720469I21Rik|AL022841|AL022940|AU021304|BB077382|mKIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding common_peak1_17_184_-1.02669609864364_7.01803341119449_7.2670341349107 chr15 96637716 96638211 + 7.2670341349107 NA intron (NM_001166458, intron 1 of 15) B1_Mur2|SINE|Alu 3999 NM_134086 105727 Mm.103568 NM_134086 ENSMUSG00000023169 Slc38a1 AA408026|AA409865|AL022800|AU015942|NAT2 solute carrier family 38, member 1 protein-coding common_peak1_17_184_-1.02669609864364_7.01803341119449_7.2670341349107-3 chrX 35891505 35891988 + 7.2670341349107 NA intron (NM_001009947, intron 1 of 52) intron (NM_001009947, intron 1 of 52) 2914 NM_001009947 75974 Mm.32873 NM_177745 ENSMUSG00000031093 Dock11 5033414A21Rik|8030476J24|Zizimin2|sph238 dedicator of cytokinesis 11 protein-coding common_peak1_17_184_-1.02669609864364_7.01803341119449_7.2670341349107-2 chr2 29868648 29869058 + 7.2670341349107 NA promoter-TSS (NM_207298) promoter-TSS (NM_207298) -641 NM_207298 99151 Mm.296336 NM_207298 ENSMUSG00000039787 Cercam 2600006K01Rik|AL024097|Ceecam1 cerebral endothelial cell adhesion molecule protein-coding common_peak1_103_573_0.443738940337957_9.38677639684467_7.26702844146483 chr19 34601340 34602639 + 7.26702844146483 NA promoter-TSS (NM_001101605) promoter-TSS (NM_001101605) -21 NM_001101605 667373 Mm.371956 NM_001101605 ENSMUSG00000079339 Ifit1bl1 Gm14446|Ifit1c|OTTMUSG00000016644 interferon induced protein with tetratricpeptide repeats 1B like 1 protein-coding common_peak2_30_300_-0.766937472025395_7.850150940747_7.26671568718698 chr9 20897898 20898770 + 7.26671568718698 NA intron (NM_016876, intron 2 of 10) CpG 256 NM_016876 53356 Mm.427309 NM_016876 ENSMUSG00000070319 Eif3g 44kDa|D0Jmb4|Eif3s4|TU-189B2|eIF3-p44|p44 eukaryotic translation initiation factor 3, subunit G protein-coding common_peak1_34_106_0.939978728122387_7.21145635046234_7.26484089431099 chr5 118155017 118155384 + 7.26484089431099 NA exon (NM_172721, exon 1 of 11) exon (NM_172721, exon 1 of 11) 258 NM_172721 231672 Mm.221769 NM_172721 ENSMUSG00000032867 Fbxw8 4930438M06Rik|FBW6|FBW8|FBXO29|Fbx29 F-box and WD-40 domain protein 8 protein-coding common_peak1_59_254_0.640915306925202_8.31481109032146_7.26438145815975 chr9 88547871 88548670 + 7.26438145815975 NA 5' UTR (NM_001142943, exon 1 of 6) 5' UTR (NM_001142943, exon 1 of 6) 250 NM_001163061 71640 Mm.259988 NM_001142943 ENSMUSG00000032425 Zfp949 4930422I07Rik zinc finger protein 949 protein-coding common_peak2_59_254_0.640915306925202_8.31481109032146_7.26438145815975 chr13 38204743 38205660 + 7.26438145815975 NA intron (NM_026382, intron 1 of 8) CpG 262 NM_026382 67797 Mm.250783 NM_026382 ENSMUSG00000021431 Snrnp48 1110050F08Rik|6530403A03Rik|C6orf151 small nuclear ribonucleoprotein 48 (U11/U12) protein-coding common_peak2_35_345_-0.703330554577702_8.08296295034787_7.26418418590935 chr7 42504929 42506251 + 7.26418418590935 NA intron (NM_001309388, intron 1 of 6) CpG 163 NM_001309389 434178 Mm.333810 NM_001309388 ENSMUSG00000092416 Zfp141 - zinc finger protein 141 protein-coding common_peak1_344_3882_-0.192255084783364_11.8268284495168_7.26371130145146 chr17 86968839 86973021 + 7.26371130145146 NA intron (NM_145491, intron 2 of 4) (GCTG)n|Simple_repeat|Simple_repeat 7819 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak2_45_439_-0.616286598244795_8.47321641440226_7.2628489683937 chr10 77628879 77630945 + 7.2628489683937 NA intron (NM_019803, intron 1 of 5) intron (NM_019803, intron 1 of 5) 7591 NM_019803 22213 Mm.458125 NM_019803 ENSMUSG00000009293 Ube2g2 1110003O05Rik|D10Xrf369|UBC7|Ubc7p ubiquitin-conjugating enzyme E2G 2 protein-coding common_peak1_527_5138_0.156497255601149_12.4055205646057_7.26091781051972 chr1 13371774 13374912 + 7.26091781051972 NA promoter-TSS (NM_001302702) promoter-TSS (NM_001302702) 740 NM_008678 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding common_peak1_37_364_-0.684776139184133_8.16936458417531_7.26032946335026 chr15 98089561 98090131 + 7.26032946335026 NA intron (NM_144851, intron 1 of 17) intron (NM_144851, intron 1 of 17) -2743 NM_001163488 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding common_peak2_33_101_0.957723230189032_7.15128695706601_7.25947981401983 chr2 25110652 25111299 + 7.25947981401983 NA Intergenic Intergenic -15770 NM_172204 241275 Mm.218774 NM_172204 ENSMUSG00000036805 Noxa1 NY-CO-31|SDCCAG31 NADPH oxidase activator 1 protein-coding common_peak1_44_161_0.786328634680007_7.73301432022463_7.25758918835473-2 chr10 117915140 117915766 + 7.25758918835473 NA Intergenic Intergenic -10006 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_44_161_0.786328634680007_7.73301432022463_7.25758918835473 chr4 15944799 15945870 + 7.25758918835473 NA exon (NM_026172, exon 1 of 10) exon (NM_026172, exon 1 of 10) 173 NM_026172 67460 Mm.393293 NM_026172 ENSMUSG00000028223 Decr1 1200012F07Rik|Decr|Nadph 2,4-dienoyl CoA reductase 1, mitochondrial protein-coding common_peak1_44_161_0.786328634680007_7.73301432022463_7.25758918835473 chr10 62664711 62665669 + 7.25758918835473 NA exon (NM_001033260, exon 3 of 4) exon (NM_001033260, exon 3 of 4) -13992 NM_053183 94213 Mm.114116 NM_053183 ENSMUSG00000020076 Ddx50 4933429B04Rik|8430408E17Rik|GU2|RH-II DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein-coding common_peak2_131_803_0.379492878854663_9.84079813060626_7.25586812352834 chr1 43473383 43475474 + 7.25586812352834 NA intron (NM_010879, intron 1 of 4) intron (NM_010879, intron 1 of 4) 28677 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_33_327_-0.727403432457557_7.99385028838931_7.25496622282354-2 chr17 78994265 78994942 + 7.25496622282354 NA intron (NM_029239, intron 2 of 18) intron (NM_029239, intron 2 of 18) 13902 NM_001171005 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding common_peak1_33_327_-0.727403432457557_7.99385028838931_7.25496622282354 chr11 62466691 62467382 + 7.25496622282354 NA intron (NM_001039536, intron 1 of 6) B3|SINE|B2 8576 NM_001039536 327942 Mm.390358 NM_199026 ENSMUSG00000014245 Pigl Gm737 phosphatidylinositol glycan anchor biosynthesis, class L protein-coding unique_peak1_11_11_2.20220065618458_4.68606282881345_7.25437742264732 chr14 51021678 51022090 + 7.25437742264732 NA Intergenic Intergenic 13955 NM_029145 75019 Mm.318775 NM_029145 ENSMUSG00000021872 Rnase10 4930474F22Rik|Rah1 ribonuclease, RNase A family, 10 (non-active) protein-coding unique_peak1_11_11_2.20220065618458_4.68606282881345_7.25437742264732-2 chr3 95160711 95160986 + 7.25437742264732 NA intron (NR_073550, intron 1 of 18) CpG 428 NR_073551 20360 Mm.23662 NM_011351 ENSMUSG00000038777 Sema6c Semay|mKIAA1869 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C protein-coding common_peak2_195_2045_-0.268489570461933_10.8643456445144_7.25432299493392 chr1 171680328 171682753 + 7.25432299493392 NA promoter-TSS (NM_007649) promoter-TSS (NM_007649) -515 NM_007649 12506 Mm.1738 NM_007649 ENSMUSG00000015355 Cd48 AI449234|AW610730|BCM1|BLAST|BLAST-1|BLAST1|Bcm-1|MEM-102|SLAMF2|Sgp-60 CD48 antigen protein-coding common_peak1_49_477_-0.588239304658007_8.60674715565174_7.25310022381929 chr1 34477932 34478894 + 7.25310022381929 NA Intergenic Intergenic 18667 NM_011206 19253 Mm.361 NM_011206 ENSMUSG00000026126 Ptpn18 FLP1|HSCF|PTP-HSCF|PTP-K1|Ptpk1 protein tyrosine phosphatase, non-receptor type 18 protein-coding common_peak2_87_450_0.496038741811283_9.06500299416102_7.25277181347231 chr5 142443898 142446346 + 7.25277181347231 NA intron (NM_199068, intron 2 of 8) (TG)n|Simple_repeat|Simple_repeat -18809 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding common_peak2_87_854_-0.426758244706598_9.52640148741996_7.2519307215092 chr12 70452271 70453873 + 7.2519307215092 NA promoter-TSS (NM_028339) promoter-TSS (NM_028339) -82 NM_028339 72736 Mm.204670 NM_028339 ENSMUSG00000021072 Tmx1 2810425A04Rik|AI465319|Txndc1 thioredoxin-related transmembrane protein 1 protein-coding common_peak2_224_1669_0.268651837081537_10.8399583059022_7.25138441564764 chr12 105684034 105686229 + 7.25138441564764 NA promoter-TSS (NM_178613) promoter-TSS (NM_178613) 110 NM_029654 76559 Mm.114362 NM_029654 ENSMUSG00000041341 Atg2b 2410024A21Rik|AI047755|AI503411|AW558123|C030004M05Rik|C630028L02Rik|mKIAA4067 autophagy related 2B protein-coding common_peak1_222_1649_0.270233564821226_10.8233670915438_7.24996715170824 chr14 52019173 52020682 + 7.24996715170824 NA promoter-TSS (NM_001253694) promoter-TSS (NM_001253694) -214 NM_001253694 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik zinc finger protein 219 protein-coding common_peak2_36_355_-0.695949779754988_8.12775854108891_7.24832192135942 chr7 80831517 80833175 + 7.24832192135942 NA Intergenic RLTR19-int|LTR|ERVK -29015 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_36_355_-0.695949779754988_8.12775854108891_7.24832192135942 chr11 116406812 116407399 + 7.24832192135942 NA intron (NM_027258, intron 1 of 18) B1F|SINE|Alu 5927 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_101_999_-0.391501196348274_9.77003368648795_7.24823740009314 chr12 72085593 72086641 + 7.24823740009314 NA promoter-TSS (NM_026038) promoter-TSS (NM_026038) 278 NM_024205 104771 Mm.258935 NM_024205 ENSMUSG00000005078 Jkamp 1200003C05Rik|2310047L11Rik|Jamp JNK1/MAPK8-associated membrane protein protein-coding common_peak2_52_209_0.70149624777699_8.06499364155462_7.24786542267175 chr10 39492411 39494105 + 7.24786542267175 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) -119676 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak1_78_762_-0.453440155721214_9.34881916897392_7.24774082334245 chr5 24576937 24578426 + 7.24774082334245 NA promoter-TSS (NM_013853) promoter-TSS (NM_013853) -214 NM_013853 27407 Mm.21629 NM_013853 ENSMUSG00000028953 Abcf2 0710005O05Rik|Drr3|E430001O06 ATP-binding cassette, sub-family F (GCN20), member 2 protein-coding common_peak1_36_117_0.897140601849569_7.33121335028663_7.24759754597085 chr3 101297591 101298077 + 7.24759754597085 NA Intergenic Intergenic -9895 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding common_peak1_179_1859_-0.281683646058051_10.7202450829664_7.24741324790661 chr10 18234288 18235808 + 7.24741324790661 NA promoter-TSS (NM_144820) promoter-TSS (NM_144820) -67 NM_144820 215814 Mm.296565 NM_144820 ENSMUSG00000059554 Ccdc28a 1700009P13Rik|AI480677 coiled-coil domain containing 28A protein-coding unique_peak2_11_131_-1.25723096245271_6.4157786381321_7.24568921772054 chr4 106882782 106883657 + 7.24568921772054 NA Intergenic B1_Mur2|SINE|Alu -28251 NM_198438 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak1_722_7704_0.128406770005782_12.975782626405_7.24519658817463 chr16 23985620 23990733 + 7.24519658817463 NA intron (NM_009744, intron 1 of 9) CpG 436 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_137_855_0.367740645032004_9.92533730891715_7.24426694430936 chr13 65112130 65113373 + 7.24426694430936 NA 5' UTR (NM_133680, exon 1 of 12) 5' UTR (NM_133680, exon 1 of 12) 231 NM_001083901 66631 Mm.239196 NM_133680 ENSMUSG00000038212 Mfsd14b 5730414C17Rik|AU045608|AW539692|Hiatl1 major facilitator superfamily domain containing 14B protein-coding common_peak2_85_435_0.504155156663378_9.02026190310862_7.24224495167421 chr6 13607278 13608494 + 7.24224495167421 NA 5' UTR (NM_028990, exon 1 of 5) 5' UTR (NM_028990, exon 1 of 5) 177 NM_028990 101118 Mm.254845 NM_028990 ENSMUSG00000029569 Tmem168 5730526F17Rik|8430437G11Rik|AI462344|AI504145 transmembrane protein 168 protein-coding common_peak1_243_1861_0.255106715860888_10.9901907154892_7.24098379443353 chr12 3308941 3310851 + 7.24098379443353 NA promoter-TSS (NM_016676) promoter-TSS (NM_016676) 73 NM_016676 19325 Mm.378993 NM_016676 ENSMUSG00000020671 Rab10 AW107754 RAB10, member RAS oncogene family protein-coding common_peak1_26_263_-0.822186552518859_7.63330084309902_7.24085104980786 chr18 74773207 74773710 + 7.24085104980786 NA Intergenic ORR1B1|LTR|ERVL-MaLR 4997 NR_028560 100217466 NR_028560 Scarna17 MBII-119 small Cajal body-specific RNA 17 ncRNA common_peak2_585_5880_0.146360199217273_12.5950258747706_7.23857933291281 chr4 129808500 129815215 + 7.23857933291281 NA Intergenic RMER4B|LTR|ERVK -8622 NM_008974 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding common_peak2_133_1342_-0.334087578091363_10.2241998003818_7.23848879483457 chr11 74924976 74926965 + 7.23848879483457 NA promoter-TSS (NM_013761) promoter-TSS (NM_013761) 98 NM_001002764 103677 Mm.288460 NM_001002764 ENSMUSG00000038290 Smg6 AI317223|AU041178 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_25_255_-0.844578755359068_7.57771062232047_7.23830495276314 chr6 136828430 136828771 + 7.23830495276314 NA promoter-TSS (NM_178776) promoter-TSS (NM_178776) -243 NM_178776 320135 Mm.386899 NM_178776 ENSMUSG00000047515 BC049715 - cDNA sequence BC049715 protein-coding common_peak2_90_885_-0.418817845834971_9.58175396563753_7.23828675848561 chr8 90794657 90797005 + 7.23828675848561 NA Intergenic L2a|LINE|L2 -33004 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_90_885_-0.418817845834971_9.58175396563753_7.23828675848561 chr1 182124788 182125232 + 7.23828675848561 NA intron (NM_012058, intron 1 of 2) CpG 273 NM_012058 27058 Mm.273196 NM_012058 ENSMUSG00000026511 Srp9 9kDa signal recognition particle 9 protein-coding common_peak2_144_916_0.355990977795836_10.018773412493_7.23458261524548 chr7 44984891 44986630 + 7.23458261524548 NA intron (NR_045521, intron 1 of 11) intron (NR_045521, intron 1 of 11) 660 NM_001252476 15469 Mm.27545 NM_019830 ENSMUSG00000109324 Prmt1 6720434D09Rik|AW214366|Hrmt1l2|Mrmt1 protein arginine N-methyltransferase 1 protein-coding common_peak2_90_473_0.483601793821789_9.13054414580915_7.23410952929562 chr2 3656666 3659153 + 7.23410952929562 NA Intergenic Intergenic -55549 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding unique_peak2_13_149_-1.16886625166431_6.64438556466373_7.23326458486699 chr5 66199689 66200858 + 7.23326458486699 NA Intergenic Intergenic -8938 NR_040695 73639 Mm.48851 NR_040695 ENSMUSG00000107014 1700126H18Rik - RIKEN cDNA 1700126H18 gene ncRNA unique_peak2_13_149_-1.16886625166431_6.64438556466373_7.23326458486699-2 chrX 140456040 140457197 + 7.23326458486699 NA promoter-TSS (NM_021463) promoter-TSS (NM_021463) 15 NM_021463 19139 Mm.287178 NM_021463 ENSMUSG00000031432 Prps1 2310010D17Rik|C76571|C76678|PRS-I|Prps-1 phosphoribosyl pyrophosphate synthetase 1 protein-coding common_peak1_26_67_1.13474472558926_6.65483520404497_7.23326458486696 chr5 113165279 113165857 + 7.23326458486696 NA Intergenic Intergenic -2255 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak2_74_356_0.550369444260568_8.75496498615938_7.23275755038594-2 chr17 86957250 86958957 + 7.23275755038594 NA Intergenic Intergenic -5008 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak2_74_356_0.550369444260568_8.75496498615938_7.23275755038594 chr15 74917822 74919563 + 7.23275755038594 NA Intergenic Intergenic -36359 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak2_185_1928_-0.276208395975157_10.7755332300615_7.23265431244031 chr19 41481093 41484052 + 7.23265431244031 NA Intergenic GC_rich|Low_complexity|Low_complexity -67067 NM_172154 212391 Mm.422910 NM_172154 ENSMUSG00000025019 Lcor 3110023F06Rik|A630025C20Rik|Mlr2|mKIAA1795 ligand dependent nuclear receptor corepressor protein-coding common_peak1_119_703_0.40244943633312_9.66065633680386_7.23193610426302 chr10 42961760 42963038 + 7.23193610426302 NA Intergenic Intergenic 101887 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak1_268_2121_0.239150180654242_11.1707840312419_7.23067488158331 chr11 60113521 60116258 + 7.23067488158331 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) 9876 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak1_48_185_0.737717425802654_7.90801752400936_7.23019922040026 chr7 25711259 25712016 + 7.23019922040026 NA 3' UTR (NM_028771, exon 5 of 5) 3' UTR (NM_028771, exon 5 of 5) 7416 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak1_12_140_-1.21074241894422_6.53418014292668_7.22869651321608 chr13 45414291 45414681 + 7.22869651321608 NA Intergenic Intergenic 24744 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak1_25_63_1.15542124464093_6.57771062232047_7.22806967947793 chr2 114200742 114201422 + 7.22806967947793 NA intron (NM_175466, intron 1 of 1) intron (NM_175466, intron 1 of 1) 350 NM_175466 228491 Mm.132523 NM_175466 ENSMUSG00000040321 Zfp770 6430601A21Rik|Znf770 zinc finger protein 770 protein-coding common_peak1_43_420_-0.631266369186088_8.40204323847335_7.22781349548304 chr13 21734644 21735705 + 7.22781349548304 NA exon (NM_178210, exon 1 of 1) exon (NM_178210, exon 1 of 1) 140 NM_178210 319159 NM_178210 ENSMUSG00000067455 Hist1h4j - histone cluster 1, H4j protein-coding common_peak1_43_420_-0.631266369186088_8.40204323847335_7.22781349548304-2 chr4 8843057 8843614 + 7.22781349548304 NA intron (NM_001277149, intron 19 of 37) intron (NM_001277149, intron 19 of 37) 152929 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak2_124_744_0.39302416366518_9.73760869718211_7.22726722087865 chr8 22838212 22839572 + 7.22726722087865 NA Intergenic MTC|LTR|ERVL-MaLR -20647 NM_001081149 244349 Mm.182776 NM_001081149 ENSMUSG00000031540 Kat6a 1500036M03|9930021N24Rik|MOZ|Myst3|Zfp220 K(lysine) acetyltransferase 6A protein-coding common_peak2_81_792_-0.443121479452197_9.40961631597788_7.22617529838537 chr11 20106627 20109246 + 7.22617529838537 NA intron (NM_146243, intron 1 of 8) intron (NM_146243, intron 1 of 8) 5015 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding common_peak1_172_1168_0.318151316960893_10.3501348730121_7.22414308261743 chr17 27908715 27910206 + 7.22414308261743 NA 5' UTR (NM_181413, exon 1 of 25) 5' UTR (NM_181413, exon 1 of 25) 154 NM_181413 224650 Mm.32556 NM_181413 ENSMUSG00000024219 Anks1 Anks1a|mKIAA0229 ankyrin repeat and SAM domain containing 1 protein-coding common_peak1_276_2205_0.235002973456147_11.2247185623195_7.22343853912671 chr12 44268198 44270017 + 7.22343853912671 NA promoter-TSS (NM_026164) promoter-TSS (NM_026164) -47 NM_026164 67452 Mm.54126 NM_026164 ENSMUSG00000036257 Pnpla8 1200006O19Rik|AI467579|Ipla2(gamma) patatin-like phospholipase domain containing 8 protein-coding common_peak1_47_457_-0.598816008818492_8.5397957836877_7.22308900493715 chr7 132794640 132795484 + 7.22308900493715 NA intron (NM_212473, intron 1 of 4) intron (NM_212473, intron 1 of 4) -8127 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_125_1255_-0.346399277753489_10.1214211100149_7.2189867763614 chr7 44740869 44742613 + 7.2189867763614 NA exon (NM_001289839, exon 2 of 5) exon (NM_001289839, exon 2 of 5) 6608 NM_001289836 243963 Mm.382935 NM_178734 ENSMUSG00000048012 Zfp473 D030014N22Rik|Znf473|zfp-100 zinc finger protein 473 protein-coding common_peak2_106_1051_-0.379948569936529_9.84894470432404_7.21824040059318 chr9 106280184 106281749 + 7.21824040059318 NA promoter-TSS (NM_027354) promoter-TSS (NM_027354) -95 NM_027354 70235 Mm.23054 NM_027354 ENSMUSG00000023345 Poc1a 2510040D07Rik|Wdr51a|cha POC1 centriolar protein A protein-coding common_peak1_79_772_-0.44996575392136_9.36934172696417_7.21554033406668 chr14 55105782 55106882 + 7.21554033406668 NA TTS (NM_177049) TTS (NM_177049) 261 NM_001303502 11766 Mm.238879 NM_007455 ENSMUSG00000040701 Ap1g2 Adtg2|G2ad adaptor protein complex AP-1, gamma 2 subunit protein-coding common_peak2_193_1366_0.295153146943704_10.5643741010779_7.2150670716353 chr11 69765073 69766938 + 7.2150670716353 NA promoter-TSS (NM_029348) promoter-TSS (NM_029348) 93 NM_029348 75580 Mm.426361 NM_029348 ENSMUSG00000018750 Zbtb4 2310026P19Rik|9230111I22Rik|mKIAA1538 zinc finger and BTB domain containing 4 protein-coding unique_peak1_13_17_1.89002743738926_5.11493872013694_7.21273304662637-3 chr18 75457409 75457792 + 7.21273304662637 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -57045 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA unique_peak1_13_17_1.89002743738926_5.11493872013694_7.21273304662637-4 chr9 66586629 66586992 + 7.21273304662637 NA intron (NM_001302116, intron 1 of 13) intron (NM_001302116, intron 1 of 13) 6305 NM_144937 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding unique_peak1_13_17_1.89002743738926_5.11493872013694_7.21273304662637-2 chr14 78691945 78692315 + 7.21273304662637 NA intron (NM_001081336, intron 1 of 28) intron (NM_001081336, intron 1 of 28) 32959 NM_001081336 380921 Mm.89591 NM_001081336 ENSMUSG00000034731 Dgkh 5930402B05Rik|D130015C16|DGK diacylglycerol kinase, eta protein-coding unique_peak1_13_17_1.89002743738926_5.11493872013694_7.21273304662637 chr11 117139668 117140056 + 7.21273304662637 NA intron (NM_028777, intron 2 of 16) intron (NM_028777, intron 2 of 16) 24690 NM_001166506 74136 Mm.272312 NM_028777 ENSMUSG00000020823 Sec14l1 1200017E04Rik|2810012L19Rik|Naa-35 SEC14-like lipid binding 1 protein-coding common_peak2_163_1086_0.32853166241083_10.2504020562327_7.21235284310812 chr18 78140281 78143043 + 7.21235284310812 NA intron (NM_001171011, intron 1 of 8) intron (NM_001171011, intron 1 of 8) 457 NM_001171011 108052 Mm.33832 NM_028122 ENSMUSG00000059336 Slc14a1 2610507K20Rik|3021401A05Rik|UT-B|Utb1 solute carrier family 14 (urea transporter), member 1 protein-coding common_peak1_51_496_-0.575068485734999_8.66956779869479_7.21134117882781 chr4 149166822 149167612 + 7.21134117882781 NA promoter-TSS (NM_001081274) promoter-TSS (NM_001081274) -510 NM_001081274 110208 Mm.252080 NM_025801 ENSMUSG00000028961 Pgd 0610042A05Rik|AU019875|C78335 phosphogluconate dehydrogenase protein-coding common_peak1_117_1169_-0.360154098242585_10.0122157653495_7.21070815571969 chr19 10278970 10280521 + 7.21070815571969 NA intron (NM_198114, intron 1 of 19) intron (NM_198114, intron 1 of 19) 25132 NM_198114 269060 Mm.329718 NM_198114 ENSMUSG00000035735 Dagla Nsddr diacylglycerol lipase, alpha protein-coding common_peak1_117_1169_-0.360154098242585_10.0122157653495_7.21070815571969-2 chr19 29640443 29642059 + 7.21070815571969 NA intron (NM_001081213, intron 2 of 14) intron (NM_001081213, intron 2 of 14) 7169 NM_001081213 226090 Mm.267131 NM_146098 ENSMUSG00000046324 Ermp1 D19Ertd410e|D19Wsu12e|Fxna|mKIAA1815 endoplasmic reticulum metallopeptidase 1 protein-coding common_peak2_100_988_-0.392978517153653_9.75333745218228_7.21007026308583 chr19 46327756 46330199 + 7.21007026308583 NA TTS (NM_001164292) TTS (NM_001164292) 793 NM_133694 68431 Mm.19973 NM_133694 ENSMUSG00000025226 Fbxl15 0710008C12Rik|Fbxo37 F-box and leucine-rich repeat protein 15 protein-coding common_peak1_18_192_-0.99209283387119_7.09641062033249_7.20991632081944 chr4 107253761 107254180 + 7.20991632081944 NA promoter-TSS (NM_028394) promoter-TSS (NM_028394) 36 NM_028394 72938 Mm.21787 NM_028394 ENSMUSG00000063172 Hspb11 2900042B11Rik|IFT25 heat shock protein family B (small), member 11 protein-coding common_peak2_18_192_-0.99209283387119_7.09641062033249_7.20991632081944 chr14 51884700 51885509 + 7.20991632081944 NA intron (NM_001029990, intron 1 of 13) CpG 262 NM_001029990 52535 Mm.5750 NM_001029990 ENSMUSG00000004561 Mettl17 2310032K15Rik|D14Ertd209e|Mett11d1 methyltransferase like 17 protein-coding unique_peak2_5_80_-1.77929915716524_5.450200424302_7.20895101807891 chr16 45025039 45025763 + 7.20895101807891 NA Intergenic Intergenic -68652 NM_026439 67896 Mm.181074 NM_026439 ENSMUSG00000022665 Ccdc80 2610001E17Rik|DRO1|Ssg1|Urb coiled-coil domain containing 80 protein-coding unique_peak2_5_80_-1.77929915716524_5.450200424302_7.20895101807891-2 chr2 25853950 25854553 + 7.20895101807891 NA Intergenic Intergenic -7003 NM_001001714 227631 Mm.301632 NM_001001714 ENSMUSG00000059625 Sohlh1 Gm110|Nohlh spermatogenesis and oogenesis specific basic helix-loop-helix 1 protein-coding common_peak1_16_175_-1.05589535766313_6.93148393980573_7.20802560170285 chr14 70280072 70280430 + 7.20802560170285 NA intron (NM_001304992, intron 1 of 12) intron (NM_001304992, intron 1 of 12) 9246 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding unique_peak2_16_175_-1.05589535766313_6.93148393980573_7.20802560170285 chr11 45794163 45795486 + 7.20802560170285 NA Intergenic Intergenic -13259 NR_045876 100009664 Mm.415439 NR_045876 F630206G17Rik - RIKEN cDNA F630206G17 gene ncRNA common_peak1_16_175_-1.05589535766313_6.93148393980573_7.20802560170285-4 chrX 107217237 107217690 + 7.20802560170285 NA Intergenic Intergenic -38415 NM_001177781 213439 Mm.383562 NM_001033251 ENSMUSG00000073008 Gpr174 Gm376|Lypsr3 G protein-coupled receptor 174 protein-coding common_peak1_16_175_-1.05589535766313_6.93148393980573_7.20802560170285-3 chr7 19300805 19301217 + 7.20802560170285 NA Intergenic Intergenic 9034 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding common_peak1_16_175_-1.05589535766313_6.93148393980573_7.20802560170285-2 chr17 12751049 12751449 + 7.20802560170285 NA intron (NM_010515, intron 1 of 47) intron (NM_010515, intron 1 of 47) 9938 NR_027784 104103 Mm.26553 NR_002853 ENSMUSG00000078247 Airn 2810051F02Rik|2810434M15Rik|AI256653|AI597500|AW049873|Air|B930018I07Rik|D17Ertd663e|IGF2RAS antisense Igf2r RNA ncRNA common_peak1_97_957_-0.400393297639139_9.70368519691661_7.20765659154013 chr18 39009178 39010593 + 7.20765659154013 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 16740 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak2_131_1320_-0.336870181213238_10.1989796606402_7.20685541739622 chr19 37108400 37111906 + 7.20685541739622 NA intron (NM_001290826, intron 4 of 10) intron (NM_001290826, intron 4 of 10) -63690 NR_045329 319931 Mm.446730 NR_045329 ENSMUSG00000097591 A330032B11Rik - RIKEN cDNA A330032B11 gene ncRNA common_peak1_42_150_0.807322430928872_7.64206595478951_7.20643252848762 chr5 113562949 113563699 + 7.20643252848762 NA intron (NM_177292, intron 3 of 7) intron (NM_177292, intron 3 of 7) 12904 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak1_166_1710_-0.293877438801454_10.5936853250887_7.20588120219354 chr19 5490487 5492224 + 7.20588120219354 NA intron (NM_007687, intron 1 of 3) CpG 900 NM_007687 12631 Mm.329655 NM_007687 ENSMUSG00000056201 Cfl1 AA959946|Cof cofilin 1, non-muscle protein-coding unique_peak1_22_50_1.26603546212201_6.3054430730325_7.20407232809799 chr2 18609051 18609479 + 7.20407232809799 NA Intergenic CpG -63197 NM_147778 12238 Mm.249586 NM_147778 ENSMUSG00000051154 Commd3 AW550818|Bup|D2Ertd542e COMM domain containing 3 protein-coding common_peak1_22_50_1.26603546212201_6.3054430730325_7.20407232809799 chr13 51764671 51765207 + 7.20407232809799 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 28808 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_22_50_1.26603546212201_6.3054430730325_7.20407232809799-2 chr18 84295155 84295745 + 7.20407232809799 NA intron (NM_001033341, intron 8 of 8) intron (NM_001033341, intron 8 of 8) 207292 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding common_peak2_121_720_0.397276312992506_9.69249360573708_7.2014383929675 chr13 69610973 69612744 + 7.2014383929675 NA promoter-TSS (NM_145354) promoter-TSS (NM_145354) -158 NM_145354 28114 Mm.260009 NM_145354 ENSMUSG00000021595 Nsun2 D13Wsu123e|Misu NOL1/NOP2/Sun domain family member 2 protein-coding common_peak2_558_5534_0.150364483659869_12.5095498434988_7.20111867177195 chr12 51862923 51868096 + 7.20111867177195 NA Intergenic MIR3|SINE|MIR -35973 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak2_60_261_0.631096449509522_8.34897122629221_7.20084792883366 chr3 130736390 130737640 + 7.20084792883366 NA Intergenic Intergenic -6617 NM_001005859 68436 Mm.140568 NM_026724 ENSMUSG00000062006 Rpl34 1100001I22Rik ribosomal protein L34 protein-coding common_peak2_243_1862_0.254332114478045_10.9905780161807_7.20084426659051 chr7 19821345 19825095 + 7.20084426659051 NA promoter-TSS (NM_033601) promoter-TSS (NM_033601) -465 NM_033601 12051 Mm.439658 NM_033601 ENSMUSG00000053175 Bcl3 AI528691|Bcl-3 B cell leukemia/lymphoma 3 protein-coding common_peak1_312_2594_0.21692437274897_11.4499810096197_7.20067372637861 chr15 80710338 80712429 + 7.20067372637861 NA promoter-TSS (NM_144812) promoter-TSS (NM_144812) 70 NM_144812 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak1_69_321_0.577141147595272_8.61948745191225_7.2003204812843 chrX 162887709 162888462 + 7.2003204812843 NA exon (NM_025932, exon 1 of 9) exon (NM_025932, exon 1 of 9) 377 NM_025932 67043 Mm.44207 NM_025932 ENSMUSG00000031357 Syap1 2010110O17Rik|AW011796 synapse associated protein 1 protein-coding common_peak1_41_401_-0.646964736194073_8.32756932308189_7.19983526141676-2 chrX 20617798 20618377 + 7.19983526141676 NA promoter-TSS (NM_019435) promoter-TSS (NM_019435) 328 NM_145627 236732 Mm.279194 NM_145627 ENSMUSG00000031060 Rbm10 E430039K10Rik RNA binding motif protein 10 protein-coding common_peak1_41_401_-0.646964736194073_8.32756932308189_7.19983526141676 chr2 34976546 34977284 + 7.19983526141676 NA Intergenic B3|SINE|B2 -15143 NM_009421 22029 Mm.239514 NM_009421 ENSMUSG00000026875 Traf1 4732496E14Rik TNF receptor-associated factor 1 protein-coding common_peak1_40_391_-0.653266579049782_8.28807655459032_7.19979343954649 chr17 24550083 24550640 + 7.19979343954649 NA exon (NM_013630, exon 1 of 46) exon (NM_013630, exon 1 of 46) 411 NM_013630 18763 Mm.30435 NM_013630 ENSMUSG00000032855 Pkd1 PC1|mFLJ00285 polycystic kidney disease 1 homolog protein-coding common_peak2_156_1023_0.337475634405649_10.1687378172028_7.19963651976477 chr8 70301789 70303474 + 7.19963651976477 NA promoter-TSS (NM_001024922) promoter-TSS (NM_001024922) -154 NM_021538 59042 Mm.28668 NM_021538 ENSMUSG00000055681 Cope 1110005D17Rik|Cope1 coatomer protein complex, subunit epsilon protein-coding unique_peak1_12_14_2.02191833784606_4.91784976453155_7.1995973512372 chr11 115232551 115232941 + 7.1995973512372 NA intron (NM_001033393, intron 9 of 9) intron (NM_001033393, intron 9 of 9) 34497 NM_010350 14813 Mm.39090 NM_010350 ENSMUSG00000020734 Grin2c GluN2C|NMDAR2C|NR2C glutamate receptor, ionotropic, NMDA2C (epsilon 3) protein-coding unique_peak1_12_14_2.02191833784606_4.91784976453155_7.1995973512372-2 chr19 59343583 59343980 + 7.1995973512372 NA intron (NM_001033222, intron 1 of 4) intron (NM_001033222, intron 1 of 4) 1999 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding common_peak1_75_363_0.545794185570907_8.78069173298415_7.19739989808166 chr8 22858556 22859306 + 7.19739989808166 NA promoter-TSS (NM_001081149) promoter-TSS (NM_001081149) -608 NM_001081149 244349 Mm.182776 NM_001081149 ENSMUSG00000031540 Kat6a 1500036M03|9930021N24Rik|MOZ|Myst3|Zfp220 K(lysine) acetyltransferase 6A protein-coding common_peak2_266_2895_-0.222693002165734_11.3884993860003_7.19615600497118 chr12 86822955 86826581 + 7.19615600497118 NA Intergenic Intergenic 60046 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_73_349_0.555184850565437_8.72880353711505_7.19371672377958 chr3 41082206 41083074 + 7.19371672377958 NA exon (NM_027558, exon 1 of 3) exon (NM_027558, exon 1 of 3) 406 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak1_53_514_-0.559608744044629_8.72862425004827_7.19371672377958 chr16 57606448 57607164 + 7.19371672377958 NA promoter-TSS (NM_025599) promoter-TSS (NM_025599) 61 NM_025599 66497 Mm.425976 NM_025599 ENSMUSG00000022748 Cmss1 1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629 cms small ribosomal subunit 1 protein-coding unique_peak2_28_281_-0.790888037886226_7.74410733345568_7.19336475075309 chr2 32607805 32609531 + 7.19336475075309 NA intron (NM_001289549, intron 2 of 6) intron (NM_001289549, intron 2 of 6) 1683 NR_110347 50935 Mm.88831 NM_016973 ENSMUSG00000026811 St6galnac6 ST6GalNAcVI|Siat7f ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 protein-coding common_peak2_46_448_-0.607440547315129_8.50685136108358_7.1916731346213 chr1 13558771 13560559 + 7.1916731346213 NA Intergenic MTEa|LTR|ERVL-MaLR 30245 NM_028173 72265 Mm.28765 NM_028173 ENSMUSG00000025935 Tram1 1810049E02Rik|TRAMP translocating chain-associating membrane protein 1 protein-coding common_peak1_46_448_-0.607440547315129_8.50685136108358_7.1916731346213 chr3 109122525 109123073 + 7.1916731346213 NA promoter-TSS (NM_172685) promoter-TSS (NM_172685) -350 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak1_181_1253_0.306635721104364_10.4456394933542_7.19119013992113 chr4 116220670 116222186 + 7.19119013992113 NA promoter-TSS (NM_181585) promoter-TSS (NM_181585) -486 NM_181585 18710 Mm.253819 NM_181585 ENSMUSG00000028698 Pik3r3 AA414954|p55pik phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55) protein-coding common_peak2_51_204_0.702553456321842_8.03075682766637_7.19017742431449-2 chr5 24100400 24101439 + 7.19017742431449 NA intron (NM_026448, intron 1 of 10) CpG 329 NM_026448 52323 Mm.273768 NM_026448 ENSMUSG00000028986 Klhl7 2700038B03Rik|D5Ertd363e|SBBI26 kelch-like 7 protein-coding common_peak2_51_204_0.702553456321842_8.03075682766637_7.19017742431449 chr11 77215589 77216752 + 7.19017742431449 NA promoter-TSS (NM_177710) promoter-TSS (NM_177710) -255 NM_177710 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot homolog 2 (Drosophila) protein-coding common_peak2_64_622_-0.506173832691106_9.03000143667845_7.18937673980628 chr17 94833867 94835559 + 7.18937673980628 NA promoter-TSS (NR_045963) promoter-TSS (NR_045963) 86 NR_045964 100038746 Mm.456686 NR_045963 ENSMUSG00000066057 Gm1976 100038868 predicted gene 1976 ncRNA common_peak2_66_641_-0.495885786972579_9.07848659363601_7.1887202973432 chr11 51615018 51616310 + 7.1887202973432 NA Intergenic Intergenic -4109 NM_026631 52530 Mm.28203 NM_026631 ENSMUSG00000001056 Nhp2 2410130M07Rik|D11Ertd175e|Nola2 NHP2 ribonucleoprotein protein-coding common_peak2_59_573_-0.529638182891627_8.90008783522987_7.18734461735892 chr10 79690360 79692222 + 7.18734461735892 NA intron (NR_126325, intron 1 of 3) B2_Mm2|SINE|B2 2271 NM_008504 16904 Mm.378960 NM_008504 ENSMUSG00000054206 Gzmm Lmet1|MMET-1 granzyme M (lymphocyte met-ase 1) protein-coding common_peak1_59_573_-0.529638182891627_8.90008783522987_7.18734461735892 chr10 70094881 70095878 + 7.18734461735892 NA Intergenic Intergenic -1742 NM_001111121 76551 Mm.281741 NM_001111121 ENSMUSG00000048701 Ccdc6 2810012H18Rik|AA536681|AA960498|AW061011 coiled-coil domain containing 6 protein-coding common_peak1_329_2782_0.20961265239395_11.5472315195286_7.18690121012785 chr11 103131716 103133999 + 7.18690121012785 NA promoter-TSS (NM_027658) promoter-TSS (NM_027658) -482 NM_001130516 71059 Mm.273871 NM_027658 ENSMUSG00000043372 Hexim2 4933402L21Rik hexamethylene bis-acetamide inducible 2 protein-coding common_peak1_127_770_0.385503146769201_9.78333862329963_7.18530831084215 chr3 87524977 87526418 + 7.18530831084215 NA 5' UTR (NM_001286844, exon 1 of 5) 5' UTR (NM_001286844, exon 1 of 5) 119 NM_012051 27049 Mm.219460 NM_012051 ENSMUSG00000003382 Etv3 AI414410|METS|Pe1 ets variant 3 protein-coding common_peak2_84_429_0.503448998263032_8.99991734872098_7.18301928244759 chr3 88565926 88567831 + 7.18301928244759 NA intron (NM_033526, intron 10 of 10) intron (NM_033526, intron 10 of 10) -12793 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak1_162_1664_-0.297462018037255_10.55257545294_7.18072143124587 chr4 45011172 45012625 + 7.18072143124587 NA 5' UTR (NM_001163284, exon 1 of 2) 5' UTR (NM_001163284, exon 1 of 2) 514 NM_001163284 230119 Mm.44222 NM_173399 ENSMUSG00000049657 Zbtb5 5930421I10|9430083K24Rik|AI646847|mKIAA0354 zinc finger and BTB domain containing 5 protein-coding common_peak1_29_290_-0.77621891031058_7.79676588775299_7.1779614525751 chr19 60182596 60183211 + 7.1779614525751 NA Intergenic Intergenic 38228 NR_026942 107376 Mm.245813 NR_026942 ENSMUSG00000053117 E330013P04Rik 9930018I18Rik|AW492152 RIKEN cDNA E330013P04 gene ncRNA common_peak2_220_2337_-0.248518038482651_11.0668001952903_7.17752169478688 chr9 40422105 40425341 + 7.17752169478688 NA intron (NM_172768, intron 1 of 19) intron (NM_172768, intron 1 of 19) 32041 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak2_151_979_0.343563197953387_10.1084195379793_7.17709321348104 chr12 102650810 102654216 + 7.17709321348104 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 32507 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA unique_peak1_23_54_1.23241575456743_6.39756759080838_7.17630544054736 chr3 88630662 88631244 + 7.17630544054736 NA intron (NM_001198912, intron 2 of 21) intron (NM_001198912, intron 2 of 21) 9559 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak1_23_54_1.23241575456743_6.39756759080838_7.17630544054736-2 chr9 68884385 68884960 + 7.17630544054736 NA intron (NM_013646, intron 1 of 10) intron (NM_013646, intron 1 of 10) 119326 NR_033299 320440 Mm.483129 NM_177159 9530091C08Rik - RIKEN cDNA 9530091C08 gene ncRNA common_peak1_21_218_-0.914989316907223_7.31729240114756_7.17437098849747 chr2 32260233 32260639 + 7.17437098849747 NA promoter-TSS (NM_011675) promoter-TSS (NM_011675) -331 NM_011675 22245 Mm.425076 NM_011675 ENSMUSG00000002550 Uck1 URK1|Umpk uridine-cytidine kinase 1 protein-coding common_peak1_311_3456_-0.20252450509547_11.6540426357147_7.17414448295419 chr7 30392282 30394589 + 7.17414448295419 NA Intergenic RMER10A|LTR|ERVL -20353 NM_011662 22177 Mm.46301 NM_011662 ENSMUSG00000030579 Tyrobp DAP12|KARAP|Ly83 TYRO protein tyrosine kinase binding protein protein-coding common_peak1_96_946_-0.401882252104976_9.6862794894159_7.17035198271261 chr14 20707019 20708263 + 7.17035198271261 NA promoter-TSS (NM_001252082) promoter-TSS (NM_001252082) 89 NM_001252082 268721 Mm.275082 NM_027996 ENSMUSG00000021819 Zswim8 2310021P13Rik|4832404P21Rik|Kiaa0913|mKIAA0913 zinc finger SWIM-type containing 8 protein-coding common_peak1_37_363_-0.68081812561545_8.16738557739097_7.17001503949562 chr8 72295814 72296526 + 7.17001503949562 NA Intergenic Intergenic -22892 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_139_873_0.363180867395647_9.95307990319842_7.16970437074341 chr2 119674304 119675932 + 7.16970437074341 NA promoter-TSS (NM_030112) promoter-TSS (NM_030112) 50 NM_030112 76246 Mm.33437 NM_030112 ENSMUSG00000027304 Rtf1 2900005O08Rik|6530416A09Rik|AI853581|AU043144|AW553985|Gtl7|cbp82 RTF1, Paf1/RNA polymerase II complex component protein-coding common_peak1_98_535_0.455365273356392_9.29377182713597_7.16886648309528 chr13 51748321 51749616 + 7.16886648309528 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 44779 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_24_245_-0.856499313202856_7.51426484873781_7.16802481888996 chr7 42505143 42505757 + 7.16802481888996 NA intron (NM_001309388, intron 1 of 6) CpG 303 NM_001309389 434178 Mm.333810 NM_001309388 ENSMUSG00000092416 Zfp141 - zinc finger protein 141 protein-coding common_peak1_41_145_0.814262396104837_7.59695575693244_7.16738793284153 chr11 11570245 11571076 + 7.16738793284153 NA Intergenic Intergenic 57178 NM_001305143 102631730 Mm.159430 NM_001305143 ENSMUSG00000062511 4930512M02Rik - RIKEN cDNA 4930512M02 gene protein-coding common_peak1_30_299_-0.762136485761575_7.84775044761509_7.16735189180862 chr7 28694903 28695486 + 7.16735189180862 NA intron (NM_207238, intron 4 of 5) B1F1|SINE|Alu 2050 NM_001163702 233040 Mm.116116 NM_207238 ENSMUSG00000037463 Fbxo27 E130008B10Rik|FBG5|Gm161 F-box protein 27 protein-coding common_peak2_40_139_0.832160248120459_7.5453631410052_7.16665344489375 chr13 29855048 29855839 + 7.16665344489375 NA intron (NR_131896, intron 1 of 16) CpG 230 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak1_156_1596_-0.303672963005583_10.4893121159084_7.16639314811399 chr5 23893109 23895032 + 7.16639314811399 NA intron (NR_037304, intron 2 of 4) intron (NR_037304, intron 2 of 4) 41837 NR_028536 100217436 NR_028536 Snord93 Gm22397|MBII-336 small nucleolar RNA, C/D box 93 snoRNA common_peak2_223_1661_0.267697016806649_10.8325531751737_7.16569702567693 chr19 11911360 11913551 + 7.16569702567693 NA promoter-TSS (NM_172635) promoter-TSS (NM_172635) 56 NM_172635 225929 Mm.42711 NM_172635 ENSMUSG00000046139 Patl1 AV312086|Pat1b protein associated with topoisomerase II homolog 1 (yeast) protein-coding common_peak2_280_2249_0.231882201096662_11.2516503866527_7.16554788585749 chr12 8673002 8676308 + 7.16554788585749 NA promoter-TSS (NM_030723) promoter-TSS (NM_030723) -26 NM_030723 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding unique_peak2_19_200_-0.959917463548152_7.17109295940485_7.16423552308084 chr3 136697226 136698698 + 7.16423552308084 NA intron (NM_001293622, intron 1 of 12) MLT1A0|LTR|ERVL-MaLR 27896 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding common_peak1_34_335_-0.710871708255226_8.03688156865115_7.16414922358356 chr19 47865240 47865769 + 7.16414922358356 NA promoter-TSS (NM_026619) promoter-TSS (NM_026619) -41 NM_030051 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak1_108_614_0.427299635303035_9.47809241787812_7.16289367513535 chr4 136052359 136053373 + 7.16289367513535 NA intron (NM_025919, intron 1 of 5) CpG 505 NM_025919 67025 Mm.276856 NM_025919 ENSMUSG00000059291 Rpl11 2010203J19Rik ribosomal protein L11 protein-coding common_peak1_157_1607_-0.302340288879256_10.4998815467393_7.1619804800846 chr11 121082043 121084333 + 7.1619804800846 NA Intergenic Intergenic -2049 NM_145373 209588 Mm.69553 NM_145373 ENSMUSG00000025165 Sectm1a BC010462 secreted and transmembrane 1A protein-coding common_peak1_197_1406_0.289660161763987_10.6032366941185_7.16155427009947 chr7 5019711 5021392 + 7.16155427009947 NA 5' UTR (NM_001033383, exon 1 of 3) 5' UTR (NM_001033383, exon 1 of 3) 175 NM_001033383 319748 Mm.86607 NM_001033383 ENSMUSG00000074405 Zfp865 6430526N21Rik|Znf865 zinc finger protein 865 protein-coding common_peak1_66_301_0.592138960824645_8.5344742197374_7.16092997145466 chr2 60808879 60810250 + 7.16092997145466 NA intron (NM_001141931, intron 2 of 13) intron (NM_001141931, intron 2 of 13) 71874 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak2_7_97_-1.5450688921764_5.84217539802701_7.16056110000288 chr13 55020867 55021843 + 7.16056110000288 NA promoter-TSS (NM_001206392) promoter-TSS (NM_001206392) 30 NM_001206392 212032 Mm.267479 NM_001033245 ENSMUSG00000025877 Hk3 HK III|HK-III hexokinase 3 protein-coding unique_peak2_7_97_-1.5450688921764_5.84217539802701_7.16056110000288-2 chr18 77965052 77965858 + 7.16056110000288 NA intron (NM_001195633, intron 12 of 43) intron (NM_001195633, intron 12 of 43) 26988 NM_001195633 100502841 Mm.297782 NM_001195633 ENSMUSG00000039840 Epg5 4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein-coding unique_peak1_18_34_1.47108118645192_5.86482361017093_7.16056110000286 chr2 128087365 128087835 + 7.16056110000286 NA intron (NM_028765, intron 16 of 17) intron (NM_028765, intron 16 of 17) -38438 NM_207681 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak1_117_1168_-0.358920498303474_10.0115989653799_7.16021717252917 chr3 103868361 103869443 + 7.16021717252917 NA intron (NR_104070, intron 3 of 22) intron (NR_104070, intron 3 of 22) 8625 NM_008979 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding common_peak2_33_326_-0.722998253337556_7.99164769882931_7.15979863804885 chr10 4431323 4432446 + 7.15979863804885 NA promoter-TSS (NM_024261) promoter-TSS (NM_024261) 468 NM_025343 66084 Mm.153111 NM_025343 ENSMUSG00000019763 Rmnd1 0610042C05Rik|AA408137|AI462664|AW536662 required for meiotic nuclear division 1 homolog protein-coding common_peak1_33_326_-0.722998253337556_7.99164769882931_7.15979863804885 chr7 41633544 41634038 + 7.15979863804885 NA intron (NM_023363, intron 1 of 5) intron (NM_023363, intron 1 of 5) 260 NM_023363 67607 Mm.384626 NM_023363 ENSMUSG00000074165 Zfp788 2810426N06Rik|AI256342|AI605193 zinc finger protein 788 protein-coding common_peak2_85_436_0.500850011939706_9.02191447547045_7.15962848763138 chr10 21222709 21225609 + 7.15962848763138 NA Intergenic Intergenic -63175 NM_010848 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding common_peak1_112_646_0.417897596179893_9.54657070008246_7.15921316217732 chr12 111071314 111072681 + 7.15921316217732 NA intron (NM_198023, intron 2 of 11) intron (NM_198023, intron 2 of 11) 32199 NM_198023 217864 Mm.23808 NM_198023 ENSMUSG00000037896 Rcor1 5730409O11|6720480E22Rik|AU042633|D12Wsu95e|Rocr1|mKIAA0071 REST corepressor 1 protein-coding common_peak2_210_1532_0.278457357480185_10.7213706603989_7.15902417506197 chr4 155249161 155251009 + 7.15902417506197 NA non-coding (NR_033802, exon 1 of 3) non-coding (NR_033802, exon 1 of 3) 119 NR_033802 67513 Mm.10374 NM_001190445 ENSMUSG00000073684 Faap20 2610002J02Rik Fanconi anemia core complex associated protein 20 protein-coding common_peak1_86_842_-0.42659099027623_9.50609332580397_7.15860475373025 chr14 101639785 101640984 + 7.15860475373025 NA promoter-TSS (NM_001168592) promoter-TSS (NM_001168592) 87 NM_001033132 66200 Mm.250474 NM_001033132 ENSMUSG00000075486 Commd6 1110059J08Rik|1700063H17Rik COMM domain containing 6 protein-coding common_peak1_58_563_-0.534024947356968_8.87253887872031_7.15850459675553 chr15 99008634 99009564 + 7.15850459675553 NA Intergenic Intergenic -20792 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding common_peak2_58_563_-0.534024947356968_8.87253887872031_7.15850459675553 chr11 46473596 46475730 + 7.15850459675553 NA intron (NM_134250, intron 5 of 6) L2b|LINE|L2 19732 NM_134250 171285 Mm.72168 NM_134250 ENSMUSG00000020399 Havcr2 TIM-3|Tim3|Timd3 hepatitis A virus cellular receptor 2 protein-coding common_peak2_150_1528_-0.309852306375253_10.4234465381732_7.15845801366605 chr5 52189192 52191393 + 7.15845801366605 NA promoter-TSS (NR_015537) promoter-TSS (NR_015537) 254 NM_001042620 13204 Mm.993 NM_007839 ENSMUSG00000029169 Dhx15 DBP1|DEAH9|Ddx15|HRH2|mDEAH9 DEAH (Asp-Glu-Ala-His) box polypeptide 15 protein-coding common_peak2_242_1853_0.254051070520633_10.9834510638858_7.15796035642789 chr16 58497539 58503300 + 7.15796035642789 NA intron (NM_018784, intron 2 of 10) intron (NM_018784, intron 2 of 10) 22893 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding common_peak1_184_1914_-0.275239438722588_10.765508957451_7.15770730399382 chr2 166905309 166907133 + 7.15770730399382 NA intron (NM_023565, intron 1 of 24) CpG 125 NM_023565 110750 Mm.22417 NM_023565 ENSMUSG00000002718 Cse1l 2610100P18Rik|AA407533|Capts|Cas|Xpo2 chromosome segregation 1-like (S. cerevisiae) protein-coding common_peak1_48_466_-0.590402502798977_8.57207748831017_7.15757320072366 chr17 50571154 50572097 + 7.15757320072366 NA intron (NM_013880, intron 1 of 5) intron (NM_013880, intron 1 of 5) 62078 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak1_201_1445_0.285608667840695_10.6406561708715_7.15729608247868 chr2 167128663 167130350 + 7.15729608247868 NA intron (NM_008420, intron 1 of 1) intron (NM_008420, intron 1 of 1) 59312 NM_008420 16500 Mm.205341 NM_008420 ENSMUSG00000050556 Kcnb1 Kcr1-1|Kv2.1|Shab potassium voltage gated channel, Shab-related subfamily, member 1 protein-coding common_peak2_46_174_0.751919975593689_7.82717109962917_7.15709864342764 chr8 34157651 34158811 + 7.15709864342764 NA intron (NM_026432, intron 1 of 5) B1F2|SINE|Alu 3668 NM_026432 67887 Mm.290353 NM_026432 ENSMUSG00000031532 Saraf 1810045K07Rik|Tmem66 store-operated calcium entry-associated regulatory factor protein-coding common_peak1_59_255_0.63526874378406_8.31763437189203_7.15651848760681 chr5 113867427 113868465 + 7.15651848760681 NA intron (NM_011779, intron 2 of 10) intron (NM_011779, intron 2 of 10) -37445 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak1_90_474_0.480561339501737_9.13206437296918_7.15489000153688 chr11 75177968 75178834 + 7.15489000153688 NA intron (NM_144491, intron 12 of 12) intron (NM_144491, intron 12 of 12) 407 NM_027136 246257 Mm.41496 NM_027136 ENSMUSG00000038268 Ovca2 9030414M07Rik candidate tumor suppressor in ovarian cancer 2 protein-coding common_peak1_65_631_-0.499848489329866_9.05385650351217_7.15432964738409 chr17 32890914 32892183 + 7.15432964738409 NA promoter-TSS (NM_207245) promoter-TSS (NM_207245) 55 NM_207245 240066 Mm.26636 NM_207245 ENSMUSG00000095325 Zfp870 AI173952 zinc finger protein 870 protein-coding unique_peak1_16_27_1.59618133891657_5.60544559151589_7.15140128897712-5 chrX 12936781 12937165 + 7.15140128897712 NA promoter-TSS (NM_001272033) promoter-TSS (NM_001272033) 100 NM_001272033 245350 Mm.302695 NM_001272033 AA414768 OTTMUSG00000017000 expressed sequence AA414768 protein-coding unique_peak1_16_27_1.59618133891657_5.60544559151589_7.15140128897712 chr11 118216874 118217259 + 7.15140128897712 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -4324 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak1_16_27_1.59618133891657_5.60544559151589_7.15140128897712-3 chr5 34536245 34536556 + 7.15140128897712 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) -6965 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding unique_peak1_16_27_1.59618133891657_5.60544559151589_7.15140128897712-4 chr5 72760985 72761323 + 7.15140128897712 NA intron (NM_013689, intron 14 of 17) intron (NM_013689, intron 14 of 17) -8377 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding unique_peak1_16_27_1.59618133891657_5.60544559151589_7.15140128897712-2 chr16 94518896 94519312 + 7.15140128897712 NA intron (NM_007834, intron 1 of 7) MTE2b|LTR|ERVL-MaLR 7525 NM_007834 13185 Mm.7472 NM_007834 ENSMUSG00000022898 Dscr3 AW538125|Dcra Down syndrome critical region gene 3 protein-coding common_peak1_229_2444_-0.242440047681413_11.1343987259989_7.15071922505628 chr5 65696702 65699066 + 7.15071922505628 NA promoter-TSS (NM_001081321) promoter-TSS (NM_001081321) -28 NM_001081321 71521 Mm.278974 NM_027818 ENSMUSG00000029202 Pds5a 9030416H16Rik|E230024D05Rik|mKIAA0648 PDS5 cohesin associated factor A protein-coding common_peak2_340_2906_0.204748261725921_11.6076894869992_7.14942322853375 chr8 83747128 83751078 + 7.14942322853375 NA Intergenic Intergenic -7792 NM_001163031 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak1_20_42_1.3512098890964_6.1018696992503_7.14702953310028-2 chr18 79107461 79107907 + 7.14702953310028 NA intron (NM_053099, intron 1 of 5) intron (NM_053099, intron 1 of 5) 1707 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_20_42_1.3512098890964_6.1018696992503_7.14702953310028 chr12 101021512 101021917 + 7.14702953310028 NA promoter-TSS (NR_035421) promoter-TSS (NR_035421) 54 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA unique_peak1_20_42_1.3512098890964_6.1018696992503_7.14702953310028 chr15 37135641 37136194 + 7.14702953310028 NA Intergenic CpG -97119 NM_026496 252973 Mm.244612 NM_026496 ENSMUSG00000022286 Grhl2 0610015A08Rik|BOM|Tcfcp2l3|clft3 grainyhead-like 2 (Drosophila) protein-coding common_peak2_99_543_0.451776973258756_9.31335132787972_7.14561606213988 chr11 53819925 53822702 + 7.14561606213988 NA intron (NR_033332, intron 2 of 3) intron (NR_033332, intron 2 of 3) 37943 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA common_peak1_28_77_1.06326109565032_6.81703276668741_7.14389630036024-2 chr7 105936921 105937547 + 7.14389630036024 NA intron (NM_029000, intron 1 of 3) L1VL4|LINE|L1 -8543 NR_040453 100417829 Mm.490377 NR_040453 ENSMUSG00000099241 Gm17757 - GTPase, very large interferon inducible 1 pseudogene pseudo common_peak1_28_77_1.06326109565032_6.81703276668741_7.14389630036024 chr3 52926945 52927457 + 7.14389630036024 NA intron (NR_040555, intron 1 of 4) intron (NR_040555, intron 1 of 4) 465 NR_040555 622124 Mm.389434 NR_040555 ENSMUSG00000104401 Gm20750 - predicted gene, 20750 ncRNA common_peak2_74_357_0.54633393102541_8.75698274277696_7.14161111745657 chr7 99983742 99985775 + 7.14161111745657 NA Intergenic Intergenic -4300 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding unique_peak2_17_183_-1.01887659418435_7.01412365896484_7.1409107166967 chr3 87523873 87524773 + 7.1409107166967 NA Intergenic URR1B|DNA|hAT-Charlie -1255 NM_001083318 27049 Mm.219460 NM_012051 ENSMUSG00000003382 Etv3 AI414410|METS|Pe1 ets variant 3 protein-coding common_peak2_174_1799_-0.284229889815183_10.6716662463094_7.13990377404736 chr5 134312545 134315526 + 7.13990377404736 NA intron (NM_001080746, intron 1 of 34) CpG 725 NM_001080748 14886 Mm.261570 NM_010365 ENSMUSG00000060261 Gtf2i 6030441I21Rik|BAP-135|Diws1t|GtfII-I|Spin|TFII-I|WBSCR6 general transcription factor II I protein-coding common_peak2_101_997_-0.388612917023448_9.76858954682554_7.13894176042905 chr11 17211038 17212573 + 7.13894176042905 NA promoter-TSS (NM_025443) promoter-TSS (NM_025443) -88 NM_178909 103784 Mm.298132 NM_178909 ENSMUSG00000078970 Wdr92 AI553587|HZGJ WD repeat domain 92 protein-coding common_peak1_42_409_-0.633752929251495_8.3626036348797_7.13834852342532 chr5 115522234 115523216 + 7.13834852342532 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 16049 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak2_88_459_0.487528317819812_9.08925420985428_7.13832678397914 chr7 139388871 139389877 + 7.13832678397914 NA 5' UTR (NM_183144, exon 1 of 16) 5' UTR (NM_183144, exon 1 of 16) 265 NM_001127363 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding common_peak2_183_1273_0.303148175396279_10.4667236499544_7.13726083857119 chr10 45025828 45029098 + 7.13726083857119 NA Intergenic Intergenic -39751 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak1_82_801_-0.437952557286572_9.42848214781163_7.13600454045137 chr14 27376278 27377718 + 7.13600454045137 NA intron (NM_001289688, intron 2 of 9) L1Md_F2|LINE|L1 15609 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_113_655_0.413559026118447_9.56433151767731_7.13589178753988 chr12 86858888 86861210 + 7.13589178753988 NA Intergenic Intergenic 24765 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_113_655_0.413559026118447_9.56433151767731_7.13589178753988 chr9 66060114 66061157 + 7.13589178753988 NA intron (NM_011149, intron 1 of 4) intron (NM_011149, intron 1 of 4) 466 NM_011149 19035 Mm.335249 NM_011149 ENSMUSG00000032383 Ppib AA408962|AA553318|AI844835|Cphn-2|Cphn2|CyP-20b peptidylprolyl isomerase B protein-coding common_peak2_150_970_0.34519289956636_10.0959239352024_7.13522890106817 chr2 155235867 155237647 + 7.13522890106817 NA non-coding (NR_111890, exon 1 of 4) non-coding (NR_111890, exon 1 of 4) 149 NM_001291108 67068 Mm.23693 NM_025947 ENSMUSG00000047459 Dynlrb1 2010012N15Rik|2010320M17Rik|9430076K19Rik|AV124457|DNLC2A|Dncl2a|km23-1 dynein light chain roadblock-type 1 protein-coding unique_peak2_26_262_-0.816711422452707_7.63056327806595_7.13506174169794-2 chr4 118620365 118621591 + 7.13506174169794 NA promoter-TSS (NM_026789) promoter-TSS (NM_026789) 179 NM_026932 69072 Mm.29906 NM_026932 ENSMUSG00000028729 Ebna1bp2 1810014B19Rik|AA537058|B830003A16Rik|C81321|Ebp2|Nobp|p40 EBNA1 binding protein 2 protein-coding unique_peak2_26_262_-0.816711422452707_7.63056327806595_7.13506174169794 chr14 120404864 120406385 + 7.13506174169794 NA intron (NM_175341, intron 8 of 8) intron (NM_175341, intron 8 of 8) -72837 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding common_peak2_51_495_-0.572162754559587_8.66811493310708_7.13408396210662 chr8 72295309 72296923 + 7.13408396210662 NA Intergenic Intergenic -22946 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_95_935_-0.403364629118597_9.66868240502411_7.13319875793969 chr6 120530524 120531901 + 7.13319875793969 NA promoter-TSS (NM_144815) promoter-TSS (NM_144815) 87 NM_144815 214932 Mm.255322 NM_144815 ENSMUSG00000058979 Cecr5 A930002G03Rik cat eye syndrome chromosome region, candidate 5 protein-coding common_peak2_95_935_-0.403364629118597_9.66868240502411_7.13319875793969 chr8 111026871 111028677 + 7.13319875793969 NA promoter-TSS (NM_001190800) promoter-TSS (NM_001190800) -4 NM_001190800 234733 Mm.482176 NM_172284 ENSMUSG00000033658 Ddx19b 2810457M08Rik|4921519L13Rik|AW260119 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b protein-coding common_peak2_49_192_0.72017046605466_7.95254227029541_7.13119804047803 chr5 73264796 73265653 + 7.13119804047803 NA Intergenic ORR1C1|LTR|ERVL-MaLR -8606 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_25_254_-0.838932192217926_7.57488734074989_7.13092446827579 chr8 122349821 122350235 + 7.13092446827579 NA Intergenic Intergenic 10718 NM_133202 170732 Mm.154808 NM_133202 ENSMUSG00000039079 Trhr2 TRH-R2 thyrotropin releasing hormone receptor 2 protein-coding common_peak1_155_1584_-0.304099053046196_10.4782175985037_7.12775521857901 chr15 44427190 44428808 + 7.12775521857901 NA promoter-TSS (NM_175009) promoter-TSS (NM_175009) -112 NM_175009 223527 Mm.291828 NM_175009 ENSMUSG00000022338 Eny2 1810057B09Rik|6720481I12|DC6|Ey2 enhancer of yellow 2 homolog (Drosophila) protein-coding common_peak1_224_1672_0.266062494404599_10.8412529772407_7.12458543696533 chr19 55253006 55254658 + 7.12458543696533 NA 5' UTR (NM_027976, exon 1 of 22) 5' UTR (NM_027976, exon 1 of 22) 463 NM_027976 433256 Mm.292056 NM_027976 ENSMUSG00000024981 Acsl5 1700030F05Rik|ACS2|ACS5|Facl5 acyl-CoA synthetase long-chain family member 5 protein-coding common_peak2_114_663_0.411526959624904_9.58080291115938_7.12230298929174 chr13 67525512 67526977 + 7.12230298929174 NA promoter-TSS (NM_133228) promoter-TSS (NM_133228) -13 NM_133228 170763 Mm.491205 NM_133228 ENSMUSG00000097333 Zfp87 2210039O17Rik|4631412O18Rik|KRAB4|Mzf22|Zfp72 zinc finger protein 87 protein-coding common_peak1_90_883_-0.415557516671385_9.58012380105574_7.12230298929174 chr7 130827556 130828961 + 7.12230298929174 NA Intergenic Intergenic -37652 NM_133942 101476 Mm.323554 NM_133942 ENSMUSG00000040268 Plekha1 AA960558|C920009D07Rik|TAPP1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 protein-coding unique_peak2_8_105_-1.44984740387689_6.00299675262475_7.12154658593823-3 chr6 145307115 145307666 + 7.12154658593823 NA Intergenic L1MA4|LINE|L1 56838 NR_045598 100039495 Mm.121014 NR_045598 ENSMUSG00000086013 Gm15706 OTTMUSG00000025463 predicted gene 15706 ncRNA unique_peak2_8_105_-1.44984740387689_6.00299675262475_7.12154658593823-2 chr12 69257237 69257978 + 7.12154658593823 NA intron (NM_178253, intron 6 of 12) intron (NM_178253, intron 6 of 12) 15775 NM_178253 271005 Mm.180969 NM_178253 ENSMUSG00000051890 Klhdc1 - kelch domain containing 1 protein-coding unique_peak2_8_105_-1.44984740387689_6.00299675262475_7.12154658593823 chr10 96161220 96161905 + 7.12154658593823 NA Intergenic IAPEz-int|LTR|ERVK -64645 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_64_621_-0.503856249797707_9.02884264523175_7.12041631477534 chr9 92374045 92374916 + 7.12041631477534 NA Intergenic Intergenic 65103 NM_001033184 78459 Mm.179195 NM_001033184 ENSMUSG00000074139 1700057G04Rik - RIKEN cDNA 1700057G04 gene protein-coding common_peak2_56_542_-0.540309668254189_8.81465355367727_7.11818252585305 chr8 70634115 70636383 + 7.11818252585305 NA Intergenic RMER4B|LTR|ERVK -3614 NM_011819 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak1_29_82_1.03361700125078_6.89184793197231_7.11670515580946 chr15 101974865 101975489 + 7.11670515580946 NA Intergenic Intergenic -20890 NM_212487 332131 Mm.325105 NM_212487 ENSMUSG00000050463 Krt78 2310030B04Rik|Kb40 keratin 78 protein-coding unique_peak2_9_113_-1.36836809772032_6.14870596530458_7.116275765678-2 chr16 75774686 75775760 + 7.116275765678 NA Intergenic MTD-int|LTR|ERVL-MaLR -8405 NM_030201 110920 Mm.26704 NM_030201 ENSMUSG00000032932 Hspa13 1600002I10Rik|AV006182|B230217N24Rik|Stch heat shock protein 70 family, member 13 protein-coding unique_peak2_9_113_-1.36836809772032_6.14870596530458_7.116275765678 chr16 32433413 32434288 + 7.116275765678 NA intron (NM_001163160, intron 1 of 8) RMER1C|Other|Other 2620 NM_001163160 13026 Mm.98775 NM_009981 ENSMUSG00000005615 Pcyt1a CTalpha|Cctalpha|Ctpct|Cttalpha phosphate cytidylyltransferase 1, choline, alpha isoform protein-coding unique_peak2_9_113_-1.36836809772032_6.14870596530458_7.116275765678-3 chr8 94191284 94191950 + 7.116275765678 NA Intergenic Intergenic 12528 NM_013602 17748 Mm.192991 NM_013602 ENSMUSG00000031765 Mt1 MT-I|Mt-1 metallothionein 1 protein-coding common_peak1_76_740_-0.456608191532768_9.30502563653945_7.11476620161354 chr11 107393526 107394633 + 7.11476620161354 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 76641 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_37_123_0.872780204196371_7.39058641248506_7.11391124534574 chr4 138913274 138913929 + 7.11391124534574 NA intron (NM_028453, intron 1 of 7) CpG 346 NM_028453 73162 Mm.238081 NM_028453 ENSMUSG00000041161 Otud3 3110030K17Rik OTU domain containing 3 protein-coding common_peak2_37_123_0.872780204196371_7.39058641248506_7.11391124534574 chr17 69395915 69396533 + 7.11391124534574 NA Intergenic Intergenic 12246 NM_009547 22666 Mm.29434 NM_009547 ENSMUSG00000049672 Zbtb14 ZF5|Zfp161|b2b1982Clo zinc finger and BTB domain containing 14 protein-coding common_peak2_35_112_0.911118710643835_7.27573831773711_7.11378633980714 chr7 109703662 109704392 + 7.11378633980714 NA exon (NM_020616, exon 2 of 6) exon (NM_020616, exon 2 of 6) 290 NM_020616 57373 Mm.334138 NM_020616 ENSMUSG00000031023 Akip1 BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27 A kinase (PRKA) interacting protein 1 protein-coding common_peak1_35_112_0.911118710643835_7.27573831773711_7.11378633980714-2 chr5 113644015 113644684 + 7.11378633980714 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 6041 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak1_35_112_0.911118710643835_7.27573831773711_7.11378633980714 chr13 109822705 109823332 + 7.11378633980714 NA intron (NM_011056, intron 7 of 16) intron (NM_011056, intron 7 of 16) -80791 NR_035442 100316683 NR_035442 ENSMUSG00000084651 Mir1904 Mirn1904|mmu-mir-1904 microRNA 1904 ncRNA common_peak1_40_390_-0.649581532241927_8.28623403118639_7.11298302890333 chr2 114145504 114146339 + 7.11298302890333 NA intron (NM_001290788, intron 13 of 33) intron (NM_001290788, intron 13 of 33) 4649 NR_105968 102465982 NR_105968 ENSMUSG00000098464 Mir7002 Gm27429|mmu-mir-7002 microRNA 7002 ncRNA common_peak2_58_249_0.639742120379738_8.28565534485196_7.11298302890323 chr11 67965815 67967125 + 7.11298302890323 NA promoter-TSS (NM_027963) promoter-TSS (NM_027963) -13 NM_018768 55943 Mm.3973 NM_018768 ENSMUSG00000020903 Stx8 0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB syntaxin 8 protein-coding common_peak2_131_1318_-0.334684279217953_10.1978867096426_7.11196818245019 chr6 17635166 17638336 + 7.11196818245019 NA promoter-TSS (NM_007604) promoter-TSS (NM_007604) -347 NM_007604 12343 Mm.392504 NM_007604 ENSMUSG00000015733 Capza2 1110053K06Rik|AW208808|Cappa2 capping protein (actin filament) muscle Z-line, alpha 2 protein-coding common_peak1_187_1948_-0.272162665459158_10.7924370425283_7.11172646365556 chr11 55023268 55025088 + 7.11172646365556 NA intron (NM_013472, intron 1 of 25) intron (NM_013472, intron 1 of 25) 9293 NM_001110211 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak2_65_295_0.594478893218287_8.50669281223809_7.11054661483362 chr8 126665881 126667485 + 7.11054661483362 NA Intergenic Intergenic -73247 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_74_720_-0.463705740951156_9.26200257876524_7.10948241252565 chr19 60934651 60935772 + 7.10948241252565 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 45462 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak2_516_5006_0.156781760470112_12.3681216203188_7.10871991528511 chr4 101180808 101189804 + 7.10871991528511 NA intron (NM_146145, intron 4 of 24) intron (NM_146145, intron 4 of 24) 79976 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_83_811_-0.434636651013966_9.44801759167819_7.10826254941094 chr7 35234137 35235793 + 7.10826254941094 NA Intergenic Intergenic -19620 NM_001024707 435965 Mm.333783 NM_001024707 ENSMUSG00000001802 Lrp3 - low density lipoprotein receptor-related protein 3 protein-coding unique_peak2_70_680_-0.478351442165055_9.17233526692954_7.10802413035775 chr10 127099149 127102434 + 7.10802413035775 NA intron (NM_001171026, intron 5 of 14) RSINE1|SINE|B4 20369 NM_177614 216440 Mm.295246 NM_177614 ENSMUSG00000040462 Os9 4632413K17Rik|AU022351 amplified in osteosarcoma protein-coding common_peak1_160_1639_-0.297483186146467_10.5307385064322_7.10752360087626 chr12 86892926 86894395 + 7.10752360087626 NA Intergenic Intergenic -8846 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_61_591_-0.516158849708287_8.95137394077481_7.10562599754866 chr5 105238565 105240690 + 7.10562599754866 NA promoter-TSS (NM_001039646) promoter-TSS (NM_001039646) -94 NM_001039646 626578 Mm.275893 NM_001039646 ENSMUSG00000105096 Gbp10 - guanylate-binding protein 10 protein-coding common_peak1_242_2599_-0.233819308769652_11.227386253531_7.10472204595032 chr11 87466907 87469225 + 7.10472204595032 NA intron (NM_031386, intron 2 of 30) RMER17A2|LTR|ERVK 40475 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_48_186_0.729981777023048_7.91188534839916_7.10452901901764 chr7 65644924 65645605 + 7.10452901901764 NA intron (NM_172310, intron 1 of 18) CpG 366 NM_172310 272396 Mm.35127 NM_172310 ENSMUSG00000030515 Tarsl2 A530046H20Rik threonyl-tRNA synthetase-like 2 protein-coding common_peak2_81_790_-0.439478308221009_9.40779473036229_7.10373596019911 chr1 88045183 88048589 + 7.10373596019911 NA Intergenic L1M3b|LINE|L1 -8525 NM_201641 394430 Mm.300095 NM_201641 ENSMUSG00000090165 Ugt1a10 A13|Ugt1a13 UDP glycosyltransferase 1 family, polypeptide A10 protein-coding common_peak1_73_350_0.551068742093205_8.73086159135116_7.10193143374851 chr2 29678875 29679950 + 7.10193143374851 NA intron (NM_001039086, intron 2 of 25) intron (NM_001039086, intron 2 of 25) 59692 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_195_2041_-0.265666291594405_10.8629340050806_7.10154487316491 chr6 48717141 48721901 + 7.10154487316491 NA intron (NM_146167, intron 1 of 1) intron (NM_146167, intron 1 of 1) 900 NM_146167 231932 Mm.30479 NM_146167 ENSMUSG00000043931 Gimap7 IAN7|Ian3 GTPase, IMAP family member 7 protein-coding common_peak2_213_2252_-0.252048867693299_11.0116071643888_7.10068909259156 chr5 140566114 140571531 + 7.10068909259156 NA Intergenic Intergenic -3755 NM_030022 77998 Mm.160040 NM_030022 ENSMUSG00000036586 Grifin E130101O17Rik galectin-related inter-fiber protein protein-coding common_peak2_103_1018_-0.38429246915217_9.80079210158973_7.10062479944415 chr12 57229721 57231364 + 7.10062479944415 NA 5' UTR (NM_001164370, exon 1 of 10) 5' UTR (NM_001164370, exon 1 of 10) 117 NM_001164370 73490 Mm.268180 NM_001164370 ENSMUSG00000047022 Mipol1 1700081O04Rik|6030439O22Rik|AU021838|AW536152|D12Ertd19e mirror-image polydactyly 1 protein-coding common_peak1_403_4649_-0.172942184904587_12.0965439084305_7.10054158636925 chr19 5405623 5409808 + 7.10054158636925 NA intron (NR_027938, intron 1 of 3) intron (NR_027938, intron 1 of 3) 900 NR_027938 74931 Mm.388511 NR_015545 ENSMUSG00000086938 4930481A15Rik - RIKEN cDNA 4930481A15 gene ncRNA common_peak2_91_893_-0.412445594717095_9.59790822382477_7.1005324433759 chr11 50107935 50110213 + 7.1005324433759 NA intron (NM_001290750, intron 7 of 7) intron (NM_001290750, intron 7 of 7) -22286 NM_001290759 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding common_peak1_115_672_0.407425242274964_9.5981753157478_7.1005324433759 chr2 18821318 18822561 + 7.1005324433759 NA Intergenic Intergenic -20121 NR_131254 66774 Mm.87075 NR_131254 ENSMUSG00000097638 Carlr 4933439G12Rik|Carl cardiac and apoptosis-related long non-coding RNA ncRNA common_peak1_100_986_-0.39005808085094_9.75187723403093_7.1004745637719 chr12 72664063 72665570 + 7.1004745637719 NA promoter-TSS (NM_025522) promoter-TSS (NM_025522) 12 NM_025522 66375 Mm.289653 NM_025522 ENSMUSG00000021094 Dhrs7 2310016E22Rik|5730564L20Rik|AW061210|Retdsr4|Retsdr4 dehydrogenase/reductase (SDR family) member 7 protein-coding common_peak1_84_430_0.500097788763393_9.00159295347079_7.10018787126272 chr9 55149291 55150638 + 7.10018787126272 NA intron (NM_180600, intron 1 of 12) CpG 595 NM_180600 109161 Mm.207894 NM_180600 ENSMUSG00000032307 Ube2q2 3010021M21Rik ubiquitin-conjugating enzyme E2Q family member 2 protein-coding common_peak2_84_430_0.500097788763393_9.00159295347079_7.10018787126272 chr12 102338017 102340265 + 7.10018787126272 NA intron (NM_001161365, intron 3 of 9) PB1D10|SINE|Alu 55500 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_34_107_0.926558212360066_7.2181666083435_7.09976103781902 chr1 182538942 182539636 + 7.09976103781902 NA Intergenic Intergenic -21806 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_34_107_0.926558212360066_7.2181666083435_7.09976103781902 chr10 61648592 61649238 + 7.09976103781902 NA intron (NM_026438, intron 1 of 10) CpG 294 NM_026438 67895 Mm.28897 NM_026438 ENSMUSG00000020089 Ppa1 2010317E03Rik|Pyp pyrophosphatase (inorganic) 1 protein-coding common_peak2_86_841_-0.424878592400542_9.50523712686612_7.09939460577641 chr9 44129461 44131000 + 7.09939460577641 NA Intergenic CpG -4428 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding unique_peak2_30_87_1.00725058609701_6.9630569116858_7.0989552811792 chr5 31599908 31601006 + 7.0989552811792 NA Intergenic ID_B1|SINE|B4 -13494 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_30_87_1.00725058609701_6.9630569116858_7.0989552811792 chr8 117303159 117304000 + 7.0989552811792 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -45591 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_45_437_-0.609713944321308_8.46993008744052_7.09851724838248 chr11 16995491 16996358 + 7.09851724838248 NA intron (NM_019549, intron 1 of 9) MTD|LTR|ERVL-MaLR 12794 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding common_peak1_45_437_-0.609713944321308_8.46993008744052_7.09851724838248-2 chr17 29551573 29552561 + 7.09851724838248 NA intron (NM_198647, intron 1 of 12) MIRb|SINE|MIR 2265 NM_198647 381085 Mm.328934 NM_198647 ENSMUSG00000042203 Tbc1d22b BC045600 TBC1 domain family, member 22B protein-coding common_peak2_731_7835_0.125976907305379_12.9988901359203_7.09690989256671 chr5 125388120 125395108 + 7.09690989256671 NA Intergenic Intergenic -1597 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak1_38_371_-0.66621536150017_8.20605113035795_7.0964068087842 chr18 67869791 67870484 + 7.0964068087842 NA intron (NM_027556, intron 39 of 45) intron (NM_027556, intron 39 of 45) -63120 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_274_2990_-0.217015589855116_11.4379044001918_7.09501843283334 chr15 27595395 27598539 + 7.09501843283334 NA Intergenic Intergenic 25473 NR_106065 102466808 NR_106065 ENSMUSG00000098416 Mir7117 Gm27729|mmu-mir-7117 microRNA 7117 ncRNA unique_peak2_13_148_-1.15921608163059_6.63956047964687_7.09395584097392 chr10 86847374 86848104 + 7.09395584097392 NA intron (NM_138673, intron 65 of 68) intron (NM_138673, intron 65 of 68) 68734 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding common_peak1_39_381_-0.659682289218615_8.24758768342644_7.09239852533687 chr17 3261116 3261812 + 7.09239852533687 NA Intergenic Intergenic -65109 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak1_28_280_-0.785763005708358_7.74154481736675_7.09129565165448 chr1 36764254 36764959 + 7.09129565165448 NA promoter-TSS (NM_001289766) promoter-TSS (NM_001289766) 91 NM_001289766 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak1_28_280_-0.785763005708358_7.74154481736675_7.09129565165448-2 chr15 60135441 60136086 + 7.09129565165448 NA Intergenic MER34A1|LTR|ERV1 -119145 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_87_452_0.489655125020429_9.06819480255645_7.09072521118051 chr6 134791467 134792722 + 7.09072521118051 NA intron (NM_130447, intron 1 of 6) GC_rich|Low_complexity|Low_complexity 534 NM_130447 70686 Mm.491182 NM_130447 ENSMUSG00000030203 Dusp16 3830417M17Rik|AW558566|D6Ertd213e|MKP-7|MKP7|Mkpm dual specificity phosphatase 16 protein-coding common_peak1_33_102_0.943648044977309_7.15832454967187_7.09057747045834 chr19 11386907 11387549 + 7.09057747045834 NA intron (NM_001310331, intron 4 of 6) intron (NM_001310331, intron 4 of 6) 11740 NM_001310331 666907 NM_001310331 ENSMUSG00000101389 Ms4a4a EG666907 membrane-spanning 4-domains, subfamily A, member 4A protein-coding common_peak2_33_102_0.943648044977309_7.15832454967187_7.09057747045834 chr1 170589087 170590008 + 7.09057747045834 NA 5' UTR (NM_001109985, exon 1 of 10) 5' UTR (NM_001109985, exon 1 of 10) 302 NM_001109985 70729 Mm.487078 NM_027528 ENSMUSG00000038473 Nos1ap 6330408P19Rik|Capon nitric oxide synthase 1 (neuronal) adaptor protein protein-coding common_peak1_21_46_1.30520889101631_6.20719329718579_7.09044394499771 chr7 63920949 63921340 + 7.09044394499771 NA TTS (NM_001256311) TTS (NM_001256311) 4287 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak1_21_46_1.30520889101631_6.20719329718579_7.09044394499771 chr13 19162470 19162867 + 7.09044394499771 NA Intergenic B1_Mus2|SINE|Alu 214317 NM_001289546 218038 Mm.101650 NM_175007 ENSMUSG00000021314 Amph - amphiphysin protein-coding common_peak1_21_46_1.30520889101631_6.20719329718579_7.09044394499771-2 chr9 56532502 56532913 + 7.09044394499771 NA Intergenic Intergenic 102941 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding common_peak1_36_118_0.884965887903467_7.33730070725968_7.09039047925048 chr2 102866904 102867626 + 7.09039047925048 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 34400 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak2_36_118_0.884965887903467_7.33730070725968_7.09039047925048 chr9 61627060 61627745 + 7.09039047925048 NA Intergenic Intergenic 255036 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak2_31_92_0.983706763203493_7.03101219270978_7.08936169846861 chr9 110661985 110662825 + 7.08936169846861 NA intron (NM_028312, intron 1 of 6) ID_B1|SINE|B4 5902 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_32_97_0.962610103545671_7.09601489588804_7.08686364037383 chr6 99241311 99241932 + 7.08686364037383 NA intron (NM_001197321, intron 2 of 17) RMER15|LTR|ERVL 24894 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_18_191_-0.984598297324266_7.09266335205902_7.08686364037383 chr8 122281013 122281354 + 7.08686364037383 NA promoter-TSS (NM_009569) promoter-TSS (NM_009569) -958 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_24_59_1.17912459652787_6.49645289387245_7.08669015968536 chr9 21464618 21465083 + 7.08669015968536 NA intron (NM_007871, intron 2 of 19) intron (NM_007871, intron 2 of 19) 31714 NR_029585 387194 NR_029585 ENSMUSG00000065547 Mir199a-1 Mirn199|Mirn199a-1|mir-199a-1 microRNA 199a-1 ncRNA unique_peak1_24_59_1.17912459652787_6.49645289387245_7.08669015968536 chr6 145275752 145276306 + 7.08669015968536 NA Intergenic Intergenic 25477 NR_045598 100039495 Mm.121014 NR_045598 ENSMUSG00000086013 Gm15706 OTTMUSG00000025463 predicted gene 15706 ncRNA common_peak1_119_1188_-0.35365194477524_10.038707027358_7.08617801756406 chr1 180813743 180814726 + 7.08617801756406 NA promoter-TSS (NM_008210) promoter-TSS (NM_008210) -629 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a H3.3A H3 histone, family 3A protein-coding common_peak1_75_729_-0.458163827997776_9.28267073976849_7.08549652221447 chr2 180118369 180119149 + 7.08549652221447 NA promoter-TSS (NM_144500) promoter-TSS (NM_144500) -607 NM_144500 228983 Mm.253578 NM_144500 ENSMUSG00000039050 Osbpl2 C130070J12Rik|ORP-2|Orp2|mKIAA0772 oxysterol binding protein-like 2 protein-coding unique_peak2_12_139_-1.20047408349039_6.52904597519977_7.08520716664 chr13 22026060 22027036 + 7.08520716664 NA Intergenic tRNA-Val-GTG|tRNA|tRNA 9095 NM_175659 319168 Mm.250564 NM_175659 ENSMUSG00000069302 Hist1h2ah - histone cluster 1, H2ah protein-coding common_peak2_54_223_0.673936096328312_8.14432297022176_7.08472882606212 chr10 8121445 8123062 + 7.08472882606212 NA Intergenic Intergenic -166130 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_20_209_-0.936770873867625_7.24586008073231_7.08413988184823 chr12 77534591 77535083 + 7.08413988184823 NA Intergenic ORR1B1|LTR|ERVL-MaLR 124696 NM_001252616 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding common_peak1_20_209_-0.936770873867625_7.24586008073231_7.08413988184823-2 chr4 11558371 11558888 + 7.08413988184823 NA promoter-TSS (NM_001256145) promoter-TSS (NM_001256145) -291 NM_001039556 623474 Mm.491200 NM_177285 ENSMUSG00000078773 Rad54b E130016E03Rik RAD54 homolog B (S. cerevisiae) protein-coding common_peak1_20_209_-0.936770873867625_7.24586008073231_7.08413988184823-3 chrX 98938257 98938617 + 7.08413988184823 NA intron (NM_207633, intron 1 of 6) intron (NM_207633, intron 1 of 6) 656 NM_207633 77929 Mm.212290 NM_207633 ENSMUSG00000047694 Yipf6 A430107J06Rik Yip1 domain family, member 6 protein-coding common_peak1_180_1867_-0.2780714242333_10.728243027593_7.08297368391474 chr1 53844454 53846937 + 7.08297368391474 NA intron (NM_001001883, intron 21 of 28) intron (NM_001001883, intron 21 of 28) -3729 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA common_peak1_84_821_-0.431352735829192_9.46731821576709_7.08156923221 chr10 61317657 61319268 + 7.08156923221 NA Intergenic Intergenic 20626 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak1_71_689_-0.472542567420152_9.19418126795546_7.08033276046886 chr15 82354431 82355161 + 7.08033276046886 NA promoter-TSS (NM_025987) promoter-TSS (NM_025987) -505 NM_025987 67130 Mm.27570 NM_025987 ENSMUSG00000022450 Ndufa6 14kDa|2700038D15Rik|B230217P19Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14) protein-coding common_peak1_47_180_0.740541892195246_7.87011683318083_7.07996316623204 chr19 5117577 5118341 + 7.07996316623204 NA intron (NR_045528, intron 1 of 15) CpG 449 NR_045528 16594 Mm.271648 NM_008451 ENSMUSG00000024862 Klc2 8030455F02Rik|AW212649|KLC 2|KLC-2 kinesin light chain 2 protein-coding common_peak1_16_174_-1.04767485085816_6.92737368640325_7.0793378624782 chr5 86065838 86066239 + 7.0793378624782 NA promoter-TSS (NM_007683) promoter-TSS (NM_007683) -455 NM_007683 12617 Mm.4649 NM_007683 ENSMUSG00000029253 Cenpc1 CENP-C|Cenpc centromere protein C1 protein-coding common_peak1_43_157_0.782629305703204_7.69509540102871_7.07770711381706 chr17 36315005 36315536 + 7.07770711381706 NA Intergenic ERVB5_1-I_MM-int|LTR|ERVK 10880 NM_013544 14985 Mm.347438 NM_013544 ENSMUSG00000024448 H2-M10.1 9.5H histocompatibility 2, M region locus 10.1 protein-coding common_peak1_85_437_0.497552421839131_9.02356327052074_7.07759606856082 chr11 55204204 55205029 + 7.07759606856082 NA intron (NM_153139, intron 1 of 10) intron (NM_153139, intron 1 of 10) 276 NM_153139 215335 Mm.35732 NM_153139 ENSMUSG00000020261 Slc36a1 5830411H19Rik|AI839897|Pat1 solute carrier family 36 (proton/amino acid symporter), member 1 protein-coding common_peak1_219_1623_0.269179723573451_10.7999257789719_7.07738257833052 chr10 57794132 57796379 + 7.07738257833052 NA intron (NM_020561, intron 1 of 7) intron (NM_020561, intron 1 of 7) 711 NM_020561 57319 Mm.2379 NM_020561 ENSMUSG00000019872 Smpdl3a 0610010C24Rik|AI529588|ASM3A|ASML3|ASML3A sphingomyelin phosphodiesterase, acid-like 3A protein-coding common_peak1_168_1729_-0.288742473994677_10.6121850855267_7.07653291625728 chr18 44827887 44829420 + 7.07653291625728 NA promoter-TSS (NM_001163013) promoter-TSS (NM_001163013) -12 NM_001163013 240255 Mm.244482 NM_001163013 ENSMUSG00000034653 Ythdc2 3010002F02Rik|BC037178 YTH domain containing 2 protein-coding common_peak1_130_1306_-0.33495616394856_10.1845653438212_7.07527742254148 chr1 87827725 87829135 + 7.07527742254148 NA exon (NM_009118, exon 10 of 16) exon (NM_009118, exon 10 of 16) 24750 NM_009118 20215 Mm.1276 NM_009118 ENSMUSG00000056055 Sag A930001K18Rik|Arr1|Irbp|arrestin S-antigen, retina and pineal gland (arrestin) protein-coding common_peak1_57_551_-0.533248831079243_8.84190004123855_7.0723023403289 chr10 77540927 77541496 + 7.0723023403289 NA intron (NM_008404, intron 1 of 15) intron (NM_008404, intron 1 of 15) 10863 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding common_peak2_142_1438_-0.318660530157871_10.3315206116614_7.0716475313871 chr16 4677352 4679986 + 7.0716475313871 NA intron (NM_030205, intron 1 of 27) intron (NM_030205, intron 1 of 27) 1051 NM_030205 78885 Mm.325512 NM_030205 ENSMUSG00000039637 Coro7 0610011B16Rik|AW048373|AW556392 coronin 7 protein-coding unique_peak2_2_52_-2.39398192003017_4.53092949454811_7.06877884694863-2 chr7 72672779 72673117 + 7.06877884694863 NA Intergenic Intergenic -366353 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding unique_peak2_2_52_-2.39398192003017_4.53092949454811_7.06877884694863 chr12 100525626 100526113 + 7.06877884694863 NA Intergenic GA-rich|Low_complexity|Low_complexity -5047 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak1_30_298_-0.757319469463798_7.84534193946621_7.0685282050072 chr2 35411574 35412172 + 7.0685282050072 NA intron (NM_001308299, intron 6 of 7) intron (NM_001308299, intron 6 of 7) -14699 NM_001272040 74854 Mm.159338 NM_001080709 ENSMUSG00000079421 4930402F06Rik - RIKEN cDNA 4930402F06 gene protein-coding common_peak2_30_298_-0.757319469463798_7.84534193946621_7.0685282050072 chr12 3586565 3587942 + 7.0685282050072 NA intron (NM_007886, intron 1 of 18) Charlie29a|DNA|hAT-Charlie 14212 NM_007886 13528 Mm.286202 NM_007886 ENSMUSG00000071454 Dtnb - dystrobrevin, beta protein-coding unique_peak2_30_298_-0.757319469463798_7.84534193946621_7.0685282050072 chr9 106475678 106477055 + 7.0685282050072 NA promoter-TSS (NM_145620) promoter-TSS (NM_145620) 583 NM_001311150 235587 Mm.273659 NM_145619 ENSMUSG00000023249 Parp3 A930002C11Rik|AW990611|Adprt3|Adprtl3|PARP-3|pADPRT-3 poly (ADP-ribose) polymerase family, member 3 protein-coding unique_peak2_6_88_-1.64239330332118_5.65453677930581_7.06781075233344 chr10 55719878 55720580 + 7.06781075233344 NA Intergenic IAPEz-int|LTR|ERVK -386688 NM_001163833 73390 Mm.181475 NM_133751 ENSMUSG00000047669 Msl3l2 1700060H10Rik male-specific lethal 3-like 2 (Drosophila) protein-coding unique_peak2_6_88_-1.64239330332118_5.65453677930581_7.06781075233344-2 chr11 49658636 49659359 + 7.06781075233344 NA Intergenic Intergenic -4598 NM_054037 68662 Mm.22802 NM_054037 ENSMUSG00000064057 Scgb3a1 HIN-1|LuLeu2|Pnsp2|UGRP2|Utgrp2 secretoglobin, family 3A, member 1 protein-coding common_peak1_106_599_0.430151728859892_9.44389455492583_7.06748492126133 chr10 75211978 75212786 + 7.06748492126133 NA promoter-TSS (NM_001145826) promoter-TSS (NM_001145826) -8 NM_001145826 74392 Mm.27716 NM_153406 ENSMUSG00000033444 Specc1l 4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376 sperm antigen with calponin homology and coiled-coil domains 1-like protein-coding common_peak2_240_2574_-0.234505221703294_11.2131041061063_7.06605024668329 chr15 81809690 81812352 + 7.06605024668329 NA promoter-TSS (NM_017376) promoter-TSS (NM_017376) -393 NM_017376 21685 Mm.270278 NM_017376 ENSMUSG00000022389 Tef 2310028D20Rik thyrotroph embryonic factor protein-coding common_peak2_359_4069_-0.184797508029911_11.8984143251387_7.06540145658822 chr10 58445308 58448072 + 7.06540145658822 NA promoter-TSS (NM_011240) promoter-TSS (NM_011240) -162 NM_011240 19386 Mm.431695 NM_011240 ENSMUSG00000003226 Ranbp2 A430087B05Rik|AI256741|NUP358 RAN binding protein 2 protein-coding common_peak1_85_830_-0.42636518533004_9.48552207410533_7.06528041922482 chr3 90253820 90254800 + 7.06528041922482 NA promoter-TSS (NM_028881) promoter-TSS (NM_028881) 29 NM_028881 74343 Mm.35627 NM_028881 ENSMUSG00000027936 Crtc2 4632407F12Rik|Torc2|mTORC2 CREB regulated transcription coactivator 2 protein-coding common_peak2_33_325_-0.71857958207055_7.9894383631958_7.06513444025881 chr4 136189341 136190831 + 7.06513444025881 NA intron (NM_177733, intron 6 of 6) intron (NM_177733, intron 6 of 6) 9304 NM_001305399 242705 Mm.307932 NM_177733 ENSMUSG00000018983 E2f2 E2F-2 E2F transcription factor 2 protein-coding common_peak1_122_730_0.391850185266273_9.70965268858557_7.06394671129431 chr8 22838257 22839429 + 7.06394671129431 NA Intergenic MTC|LTR|ERVL-MaLR -20696 NM_001081149 244349 Mm.182776 NM_001081149 ENSMUSG00000031540 Kat6a 1500036M03|9930021N24Rik|MOZ|Myst3|Zfp220 K(lysine) acetyltransferase 6A protein-coding unique_peak2_31_307_-0.743920966383378_7.89482605750321_7.06370593955212 chr5 147062964 147064639 + 7.06370593955212 NA intron (NM_080795, intron 1 of 9) intron (NM_080795, intron 1 of 9) 12771 NM_080795 140887 Mm.272203 NM_080795 ENSMUSG00000016520 Lnx2 9630046H24|AW209022 ligand of numb-protein X 2 protein-coding common_peak2_318_2664_0.212124909993884_11.4859822726435_7.06316662330243 chr1 13658598 13661472 + 7.06316662330243 NA intron (NM_145381, intron 1 of 6) B1F1|SINE|Alu 474 NM_145381 212442 Mm.89572 NM_145381 ENSMUSG00000025937 Lactb2 Cgi-83|E430032H21Rik lactamase, beta 2 protein-coding common_peak1_78_759_-0.447756517217631_9.34597734972213_7.06060561613465 chr2 173737292 173738112 + 7.06060561613465 NA exon (NM_019806, exon 1 of 6) exon (NM_019806, exon 1 of 6) 131 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding common_peak2_78_759_-0.447756517217631_9.34597734972213_7.06060561613465 chr3 108209902 108211409 + 7.06060561613465 NA promoter-TSS (NM_001289545) promoter-TSS (NM_001289545) -128 NM_175183 72522 Mm.187326 NM_175183 ENSMUSG00000048997 Atxn7l2 2610528J18Rik ataxin 7-like 2 protein-coding unique_peak1_19_38_1.40573200876853_5.98826822324651_7.06037531594829-2 chr14 48225668 48226008 + 7.06037531594829 NA intron (NR_003630, intron 2 of 2) intron (NR_003630, intron 2 of 2) 27122 NR_003630 624367 Mm.445185 NM_001037921 ENSMUSG00000063885 Gm6498 EG624367 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_19_38_1.40573200876853_5.98826822324651_7.06037531594829 chr9 114729734 114730218 + 7.06037531594829 NA Intergenic B4|SINE|B4 -1227 NM_026036 67213 Mm.28858 NM_026036 ENSMUSG00000032434 Cmtm6 2810051A14Rik|AA536733|Cklfsf6 CKLF-like MARVEL transmembrane domain containing 6 protein-coding unique_peak1_19_38_1.40573200876853_5.98826822324651_7.06037531594829-3 chr3 137831637 137832090 + 7.06037531594829 NA Intergenic L1_Mus4|LINE|L1 -32624 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding unique_peak1_19_38_1.40573200876853_5.98826822324651_7.06037531594829 chr13 30956807 30957260 + 7.06037531594829 NA intron (NM_025588, intron 1 of 27) intron (NM_025588, intron 1 of 27) -9272 NM_153072 210554 Mm.450571 NM_153072 ENSMUSG00000076430 Hus1b - HUS1 checkpoint clamp component B protein-coding common_peak2_76_372_0.533689720517829_8.80987668051415_7.05969742616847 chr19 17354786 17357041 + 7.05969742616847 NA intron (NM_010265, intron 1 of 2) B1_Mur3|SINE|Alu 754 NM_173442 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak2_24_244_-0.850622746866187_7.51132656556948_7.05907079858848 chr3 36572094 36572836 + 7.05907079858848 NA promoter-TSS (NM_009828) promoter-TSS (NM_009828) -469 NM_009828 12428 Mm.4189 NM_009828 ENSMUSG00000027715 Ccna2 AA408589|Ccn-1|Ccn1|Ccna|CycA2|Cyca cyclin A2 protein-coding common_peak1_24_244_-0.850622746866187_7.51132656556948_7.05907079858848 chr11 69040454 69040971 + 7.05907079858848 NA Intergenic Intergenic -4925 NM_011496 20877 Mm.3488 NM_011496 ENSMUSG00000020897 Aurkb AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5 aurora kinase B protein-coding common_peak1_88_460_0.484395428334849_9.09082065459676_7.0584765042872 chr2 173436074 173437479 + 7.0584765042872 NA Intergenic L1M4|LINE|L1 -85816 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding common_peak2_42_408_-0.630229862687798_8.36084210159785_7.05381882399522 chr2 155538641 155539620 + 7.05381882399522 NA intron (NM_019811, intron 2 of 17) intron (NM_019811, intron 2 of 17) 17800 NR_040613 74945 Mm.401956 NR_040613 ENSMUSG00000086529 Acss2os 4930471I20Rik acyl-CoA synthetase short-chain family member 2, opposite strand ncRNA unique_peak2_66_639_-0.491384394737638_9.07623589751854_7.0531288290946 chr6 47756829 47759021 + 7.0531288290946 NA Intergenic CpG -5000 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_74_358_0.542309674466615_8.75899487105636_7.05118768070839 chr8 120682013 120684487 + 7.05118768070839 NA Intergenic MTD|LTR|ERVL-MaLR 14930 NM_001293559 12857 Mm.386758 NM_009941 ENSMUSG00000031818 Cox4i1 AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1 cytochrome c oxidase subunit IV isoform 1 protein-coding unique_peak2_4_70_-1.91183751424662_5.19382836238137_7.0501702374628 chr15 22751786 22752429 + 7.0501702374628 NA Intergenic IAPEz-int|LTR|ERVK -37123 NM_001165971 545091 Mm.475598 NM_001165971 Gm5803 EG545091 predicted gene 5803 protein-coding common_peak2_229_1724_0.26079805560529_10.8827796743555_7.04915079231743 chr9 74951596 74954605 + 7.04915079231743 NA promoter-TSS (NM_001113283) promoter-TSS (NM_001113283) 47 NM_001113283 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding common_peak2_83_810_-0.432858838046062_9.44712868519424_7.04816043550858 chr5 31917838 31919816 + 7.04816043550858 NA intron (NM_181279, intron 9 of 13) intron (NM_181279, intron 9 of 13) -217645 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_384_4395_-0.177148543297845_12.0134013993003_7.04404436694177 chr4 8836962 8840646 + 7.04404436694177 NA intron (NM_001277149, intron 16 of 37) intron (NM_001277149, intron 16 of 37) 148398 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak2_59_571_-0.524602592994329_8.89757004028122_7.04403632557711 chr8 117481168 117482998 + 7.04403632557711 NA Intergenic Intergenic -16208 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak1_81_789_-0.437653266812683_9.40688220965813_7.04286620273806 chr2 32502952 32504318 + 7.04286620273806 NA Intergenic PB1D10|SINE|Alu -31724 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak1_53_512_-0.553995137581103_8.7258174468165_7.04243688913426 chr17 32388734 32389462 + 7.04243688913426 NA promoter-TSS (NM_011717) promoter-TSS (NM_011717) -148 NM_011717 22404 Mm.274948 NM_011717 ENSMUSG00000024050 Wiz - widely-interspaced zinc finger motifs protein-coding common_peak1_221_1644_0.266658609928449_10.8172011735868_7.03693772102797 chr7 114414411 114416790 + 7.03693772102797 NA promoter-TSS (NR_029437) promoter-TSS (NR_029437) 346 NM_011055 18576 Mm.430730 NM_011055 ENSMUSG00000030671 Pde3b 9830102A01Rik|AI847709 phosphodiesterase 3B, cGMP-inhibited protein-coding common_peak2_61_590_-0.513719804256869_8.9501544180491_7.0353260749815 chr12 31950546 31951661 + 7.0353260749815 NA promoter-TSS (NM_153198) promoter-TSS (NM_153198) -568 NM_153198 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding common_peak1_115_673_0.405283155703422_9.59924635903357_7.03460162313263 chr10 60389024 60390524 + 7.03460162313263 NA intron (NR_045556, intron 30 of 68) intron (NR_045556, intron 30 of 68) -9952 NM_001164374 100302688 Mm.444135 NM_001164374 ENSMUSG00000090439 Gm17455 - predicted gene, 17455 protein-coding common_peak2_115_673_0.405283155703422_9.59924635903357_7.03460162313263 chr19 46618872 46621355 + 7.03460162313263 NA intron (NM_001177812, intron 2 of 4) intron (NM_001177812, intron 2 of 4) -3288 NM_001177813 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak2_101_995_-0.385718843754269_9.76714251019095_7.03040093281838 chr5 86171957 86174127 + 7.03040093281838 NA promoter-TSS (NM_172712) promoter-TSS (NM_172712) -299 NM_172712 231380 Mm.34012 NM_172712 ENSMUSG00000035898 Uba6 4930542H01|5730469D23Rik|AU021846|AW124799|E1-L2|Ube1l2 ubiquitin-like modifier activating enzyme 6 protein-coding common_peak1_26_261_-0.811215434697855_7.62781528418852_7.02987337152474 chr3 95312776 95313194 + 7.02987337152474 NA Intergenic Intergenic -2267 NM_029789 76893 Mm.181009 NM_029789 ENSMUSG00000015714 Cers2 0610013I17Rik|AI225939|Lass2|TRH3 ceramide synthase 2 protein-coding common_peak1_239_2561_-0.234561394184874_11.2057740632492_7.02985004268992 chr6 86437639 86439608 + 7.02985004268992 NA promoter-TSS (NM_001243741) promoter-TSS (NM_001243741) -23 NM_001243742 232196 Mm.404040 NM_146170 ENSMUSG00000046679 C87436 - expressed sequence C87436 protein-coding common_peak1_46_446_-0.600999933757301_8.50363105430467_7.02980636916554 chr2 154732979 154733624 + 7.02980636916554 NA Intergenic Intergenic -57809 NM_001139512 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding common_peak2_46_446_-0.600999933757301_8.50363105430467_7.02980636916554 chr12 3959483 3960811 + 7.02980636916554 NA exon (NM_001278583, exon 4 of 4) exon (NM_001278583, exon 4 of 4) 5202 NM_001278583 18976 Mm.277996 NM_008895 ENSMUSG00000020660 Pomc ACTH|BE|Beta-LPH|Clip|Gamma-LPH|Npp|Pomc-1|Pomc1|alpha-MSH|alphaMSH|beta-MSH|gamma-MSH pro-opiomelanocortin-alpha protein-coding common_peak1_41_399_-0.63976923478987_8.32397157237979_7.02878659595785 chr7 19714791 19715524 + 7.02878659595785 NA exon (NM_001109748, exon 1 of 9) exon (NM_001109748, exon 1 of 9) 272 NM_001109748 53333 Mm.61682 NM_016871 ENSMUSG00000002984 Tomm40 AW539759|Mom35|Tom40 translocase of outer mitochondrial membrane 40 homolog (yeast) protein-coding unique_peak2_41_399_-0.63976923478987_8.32397157237979_7.02878659595785 chr1 54887330 54889978 + 7.02878659595785 NA intron (NM_001081433, intron 1 of 27) MLT1J|LTR|ERVL-MaLR 37733 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_46_175_0.74369946878872_7.83128135303166_7.02828796160763 chr14 47417805 47418853 + 7.02828796160763 NA promoter-TSS (NM_144553) promoter-TSS (NM_144553) 78 NM_144553 218977 Mm.240543 NM_144553 ENSMUSG00000037544 Dlgap5 C77459|C86398|Dap-5|Dlg7|Hurp|mKIAA0008 discs, large (Drosophila) homolog-associated protein 5 protein-coding common_peak2_46_175_0.74369946878872_7.83128135303166_7.02828796160763-2 chr16 18836358 18837185 + 7.02828796160763 NA exon (NM_001033164, exon 2 of 3) exon (NM_001033164, exon 2 of 3) 191 NM_001033164 72307 Mm.36907 NM_001033164 ENSMUSG00000071632 2510002D24Rik 2410043I01Rik|AA163535|AA409624|DXMgi27 RIKEN cDNA 2510002D24 gene protein-coding common_peak1_26_68_1.11368311006143_6.66536601180888_7.02813686706987 chr7 120849178 120849772 + 7.02813686706987 NA intron (NM_001267710, intron 1 of 17) intron (NM_001267710, intron 1 of 17) -1714 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak1_412_3741_0.179468671066511_11.959328178774_7.02769511421557 chr12 52602909 52605572 + 7.02769511421557 NA Intergenic Intergenic -1918 NR_045910 73278 Mm.396209 NR_045910 ENSMUSG00000100315 1700031P21Rik - RIKEN cDNA 1700031P21 gene ncRNA common_peak2_130_798_0.375035568918896_9.82956947738742_7.0266822786734 chr16 75766035 75768077 + 7.0266822786734 NA promoter-TSS (NR_027492) promoter-TSS (NR_027492) -238 NM_030201 110920 Mm.26704 NM_030201 ENSMUSG00000032932 Hspa13 1600002I10Rik|AV006182|B230217N24Rik|Stch heat shock protein 70 family, member 13 protein-coding common_peak2_194_1380_0.28955143222813_10.5762733203721_7.02664852170692 chr6 58594550 58598492 + 7.02664852170692 NA promoter-TSS (NM_011920) promoter-TSS (NM_011920) -151 NM_011920 26357 Mm.333096 NM_011920 ENSMUSG00000029802 Abcg2 ABC15|ABCP|AI428558|BCRP|Bcrp1|MXR|MXR1 ATP-binding cassette, sub-family G (WHITE), member 2 protein-coding common_peak2_41_146_0.80441461014849_7.60187964991061_7.02651429405193 chr13 93782509 93783595 + 7.02651429405193 NA intron (NM_009712, intron 1 of 7) intron (NM_009712, intron 1 of 7) -7725 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak1_112_1111_-0.363421574551106_9.93723028544795_7.02644199119733 chr10 117224042 117224734 + 7.02644199119733 NA 5' UTR (NM_026570, exon 1 of 7) 5' UTR (NM_026570, exon 1 of 7) 119 NM_026570 64050 Mm.233529 NM_026570 ENSMUSG00000020171 Yeats4 4930573H17Rik|B230215M10Rik|GAS41|NuBI-1 YEATS domain containing 4 protein-coding common_peak2_112_1111_-0.363421574551106_9.93723028544795_7.02644199119733 chr2 155818203 155820225 + 7.02644199119733 NA promoter-TSS (NR_015528) promoter-TSS (NR_015528) -11 NR_015528 613262 Mm.330707 NR_015528 ENSMUSG00000074649 BC029722 - cDNA sequence BC029722 ncRNA common_peak2_207_2179_-0.254854241464288_10.9626852989321_7.02597784527507 chr1 34477796 34481877 + 7.02597784527507 NA Intergenic MTEa|LTR|ERVL-MaLR -18594 NM_009355 21755 Mm.10725 NM_009355 ENSMUSG00000026125 Prss39 Tesp1 protease, serine 39 protein-coding common_peak2_304_2512_0.217430082044636_11.403909996903_7.02483640669382 chr11 63987506 63993026 + 7.02483640669382 NA intron (NM_178379, intron 5 of 6) intron (NM_178379, intron 5 of 6) 26040 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak1_40_140_0.821891912666632_7.55049730873211_7.02286581504408 chr4 102573956 102574842 + 7.02286581504408 NA intron (NM_019840, intron 6 of 14) intron (NM_019840, intron 6 of 14) 4339 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding unique_peak1_15_24_1.65239707335044_5.47005472644995_7.02249541744472 chr19 10290255 10290607 + 7.02249541744472 NA intron (NM_198114, intron 1 of 19) intron (NM_198114, intron 1 of 19) 14446 NM_198114 269060 Mm.329718 NM_198114 ENSMUSG00000035735 Dagla Nsddr diacylglycerol lipase, alpha protein-coding unique_peak2_5_79_-1.76137724916798_5.44123947030337_7.02249541744472 chr1 126939315 126940046 + 7.02249541744472 NA Intergenic IAPEz-int|LTR|ERVK -109048 NM_176957 210356 Mm.377234 NM_172484 ENSMUSG00000049690 Nckap5 8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5 NCK-associated protein 5 protein-coding unique_peak1_15_24_1.65239707335044_5.47005472644995_7.02249541744472-2 chr5 53420832 53421233 + 7.02249541744472 NA Intergenic Intergenic -134747 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding unique_peak2_5_79_-1.76137724916798_5.44123947030337_7.02249541744472-2 chrX 7947414 7948040 + 7.02249541744472 NA 5' UTR (NM_001130416, exon 1 of 29) 5' UTR (NM_001130416, exon 1 of 29) 162 NM_001130416 15185 Mm.29854 NM_010413 ENSMUSG00000031161 Hdac6 Hd6|Hdac5|Sfc6|mHDA2 histone deacetylase 6 protein-coding unique_peak2_5_79_-1.76137724916798_5.44123947030337_7.02249541744472-3 chrX 169213131 169213681 + 7.02249541744472 NA intron (NM_001287530, intron 1 of 12) intron (NM_001287530, intron 1 of 12) -26197 NM_009666 11704 Mm.391342 NM_009666 ENSMUSG00000031354 Amelx ALGN|AMGL|AMGX|Amel|Amg|LRAP|Rgsc888 amelogenin, X-linked protein-coding common_peak1_75_728_-0.456186178557333_9.28168191504827_7.02223516496807 chr4 88756873 88757767 + 7.02223516496807 NA promoter-TSS (NM_001243150) promoter-TSS (NM_001243150) -524 NM_001243150 100041062 Mm.489587 NM_001243150 Gm13286 OTTMUSG00000011284 predicted gene 13286 protein-coding common_peak1_249_2681_-0.228360431703413_11.2749133060528_7.02183416111888 chr1 125433839 125435662 + 7.02183416111888 NA intron (NM_023735, intron 1 of 11) intron (NM_023735, intron 1 of 11) 977 NM_023735 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak2_234_2500_-0.237052667876634_11.1697630082427_7.02139910892802 chr5 65696407 65699251 + 7.02139910892802 NA promoter-TSS (NM_001081321) promoter-TSS (NM_001081321) 27 NM_001081321 71521 Mm.278974 NM_027818 ENSMUSG00000029202 Pds5a 9030416H16Rik|E230024D05Rik|mKIAA0648 PDS5 cohesin associated factor A protein-coding common_peak1_98_537_0.449992101257541_9.29645841318539_7.02096453842632 chr4 14863612 14865092 + 7.02096453842632 NA exon (NM_028264, exon 1 of 7) exon (NM_028264, exon 1 of 7) 133 NM_028264 72519 Mm.279158 NM_028264 ENSMUSG00000028221 Tmem55a 2610319K07Rik|AI315591|AV001360 transmembrane protein 55A protein-coding common_peak1_98_537_0.449992101257541_9.29645841318539_7.02096453842632-2 chr9 19575325 19575619 + 7.02096453842632 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -8090 NM_146522 258515 Mm.377546 NM_146522 ENSMUSG00000095667 Olfr854 MOR147-3 olfactory receptor 854 protein-coding common_peak1_398_3576_0.183500425820418_11.8962846159054_7.02058680067441 chr4 101291677 101294037 + 7.02058680067441 NA Intergenic Intergenic -27575 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_173_1785_-0.283106223269014_10.6609632534867_7.01962112629974 chr3 36853437 36855248 + 7.01962112629974 NA Intergenic Intergenic -8764 NM_172679 229227 Mm.207907 NM_172679 ENSMUSG00000037270 4932438A13Rik 4732443H21|B830039D19Rik|D630029K19Rik|FSA|Kiaa1109|Tweek RIKEN cDNA 4932438A13 gene protein-coding common_peak2_77_749_-0.451191024589026_9.32515127308873_7.0195121087859 chr5 110838977 110840805 + 7.0195121087859 NA promoter-TSS (NM_153571) promoter-TSS (NM_153571) -114 NM_153571 100900 Mm.200231 NM_153571 ENSMUSG00000043510 Hscb AI325508|AW049829|Hsc20 HscB iron-sulfur cluster co-chaperone protein-coding common_peak1_75_365_0.537888987485561_8.78464433202682_7.01801567420034 chr4 119816466 119817519 + 7.01801567420034 NA intron (NM_010657, intron 1 of 8) intron (NM_010657, intron 1 of 8) 2314 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak2_131_1316_-0.332495060222923_10.1967921001451_7.01766414200045 chr3 115672608 115676857 + 7.01766414200045 NA Intergenic Intergenic 40323 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding common_peak2_131_1316_-0.332495060222923_10.1967921001451_7.01766414200045-2 chr8 84845845 84848351 + 7.01766414200045 NA promoter-TSS (NM_007591) promoter-TSS (NM_007591) -167 NM_007591 12317 Mm.1971 NM_007591 ENSMUSG00000003814 Calr CRT|Calregulin calreticulin protein-coding common_peak1_17_182_-1.01101447641138_7.01019260007835_7.01557548430744 chr1 138973843 138974249 + 7.01557548430744 NA intron (NM_181347, intron 1 of 20) intron (NM_181347, intron 1 of 20) -3611 NR_108103 78229 Mm.437838 NR_108103 ENSMUSG00000104900 4930596I21Rik - RIKEN cDNA 4930596I21 gene ncRNA common_peak1_71_688_-0.470450188458912_9.19313507847484_7.01530040382451 chr14 121797330 121798877 + 7.01530040382451 NA promoter-TSS (NM_134074) promoter-TSS (NM_134074) -369 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak1_58_561_-0.528899915179101_8.86997636263138_7.0142461696706 chr15 102470489 102471372 + 7.0142461696706 NA intron (NM_001174073, intron 1 of 12) CpG 298 NM_001174073 18521 Mm.236513 NM_011042 ENSMUSG00000056851 Pcbp2 AW412548|Hnrpx|alphaCP-2 poly(rC) binding protein 2 protein-coding common_peak1_52_211_0.687821310879913_8.07183111000316_7.01205799991887 chr19 46478116 46478873 + 7.01205799991887 NA intron (NM_015752, intron 10 of 11) intron (NM_015752, intron 10 of 11) -23154 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_294_2404_0.221810813262742_11.3427265852888_7.01096737549475 chr8 33928054 33931826 + 7.01096737549475 NA promoter-TSS (NM_001042675) promoter-TSS (NM_001042675) -77 NM_001042675 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_55_230_0.661428019788224_8.18246305131017_7.01058061790548 chr14 59297173 59298144 + 7.01058061790548 NA promoter-TSS (NM_172603) promoter-TSS (NM_172603) -136 NM_172603 219131 Mm.254918 NM_172603 ENSMUSG00000044703 Phf11a 4933417L10Rik|Phf11|Phf11l PHD finger protein 11A protein-coding common_peak1_82_416_0.505602295723685_8.9567047213065_7.00832517926755 chr10 95745492 95746801 + 7.00832517926755 NA Intergenic Intergenic -181979 NM_027722 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak1_102_1006_-0.384300084230045_9.78369792589176_7.00782345404034 chr18 9449126 9450236 + 7.00782345404034 NA 5' UTR (NM_026484, exon 1 of 10) 5' UTR (NM_026484, exon 1 of 10) 469 NM_026484 67974 Mm.86523 NM_026484 ENSMUSG00000024286 Ccny 1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik cyclin Y protein-coding common_peak2_102_1006_-0.384300084230045_9.78369792589176_7.00782345404034 chr2 164460779 164462214 + 7.00782345404034 NA exon (NM_025575, exon 2 of 4) exon (NM_025575, exon 2 of 4) 525 NM_025575 66460 Mm.44218 NM_025575 ENSMUSG00000045503 Sys1 2610042O14Rik|AI266964|C87389 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein-coding common_peak2_90_881_-0.412289802837474_9.57848994413878_7.00716292066619 chr17 63369379 63371660 + 7.00716292066619 NA intron (NM_015794, intron 5 of 8) intron (NM_015794, intron 5 of 8) -57546 NR_130176 414079 Mm.444282 NR_130176 ENSMUSG00000090565 4930405O22Rik - RIKEN cDNA 4930405O22 gene ncRNA common_peak1_27_270_-0.795584291335945_7.6843568956859_7.00697259698433 chr6 134614989 134615517 + 7.00697259698433 NA intron (NM_026345, intron 3 of 3) intron (NM_026345, intron 3 of 3) 17235 NM_026345 67729 Mm.57648 NM_026345 ENSMUSG00000032718 Mansc1 9130403P13Rik MANSC domain containing 1 protein-coding unique_peak2_27_270_-0.795584291335945_7.6843568956859_7.00697259698433 chr13 111803179 111804528 + 7.00697259698433 NA intron (NM_011945, intron 1 of 19) intron (NM_011945, intron 1 of 19) 5130 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding common_peak2_152_991_0.337608982893865_10.1230008018338_7.00677733373791 chr4 108348582 108351409 + 7.00677733373791 NA Intergenic Intergenic 21843 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding common_peak1_307_2545_0.215929459244421_11.4219814335236_7.00658537757682 chr1 13659198 13661340 + 7.00658537757682 NA intron (NM_145381, intron 1 of 6) CpG 240 NM_145381 212442 Mm.89572 NM_145381 ENSMUSG00000025937 Lactb2 Cgi-83|E430032H21Rik lactamase, beta 2 protein-coding common_peak1_106_1047_-0.374452582181677_9.84619671044661_7.00626679673784 chr2 91053698 91054803 + 7.00626679673784 NA exon (NM_008948, exon 1 of 12) exon (NM_008948, exon 1 of 12) 234 NM_008948 19182 Mm.289832 NM_008948 ENSMUSG00000002102 Psmc3 TBP-1 proteasome (prosome, macropain) 26S subunit, ATPase 3 protein-coding common_peak1_495_4748_0.159723408621392_12.293269745169_7.00591670166886 chr15 67172685 67177792 + 7.00591670166886 NA intron (NM_009177, intron 1 of 8) intron (NM_009177, intron 1 of 8) 1644 NM_009177 20442 Mm.248334 NM_009177 ENSMUSG00000013846 St3gal1 5330418N22Rik|AI467004|ST3GalI|Siat4|Siat4a|St3gal-1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding common_peak2_39_380_-0.655900648676189_8.24569686315523_7.00515330262349 chr15 97457931 97459279 + 7.00515330262349 NA Intergenic Intergenic -211318 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_284_3112_-0.211485555040683_11.4983470839488_7.00477828787857 chr2 167931397 167933456 + 7.00477828787857 NA promoter-TSS (NM_011201) promoter-TSS (NM_011201) 99 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_223_2368_-0.243660799663237_11.0882320834086_7.00321306103882 chr18 32066963 32068911 + 7.00321306103882 NA 5' UTR (NM_173441, exon 1 of 14) 5' UTR (NM_173441, exon 1 of 14) 203 NM_173441 73473 Mm.66853 NM_173441 ENSMUSG00000024384 Iws1 1700069O15Rik|3000008H23|AL117927|AW214353 IWS1, SUPT6 interacting protein protein-coding unique_peak2_22_226_-0.888087683197405_7.38250464569221_7.00126042799822 chr11 119041075 119042132 + 7.00126042799822 NA promoter-TSS (NM_013926) promoter-TSS (NM_013926) -690 NM_013926 30951 Mm.99953 NM_013926 ENSMUSG00000025578 Cbx8 Pc3 chromobox 8 protein-coding common_peak2_22_226_-0.888087683197405_7.38250464569221_7.00126042799822 chr4 117210432 117211179 + 7.00126042799822 NA Intergenic Intergenic -28181 NM_134471 73804 Mm.247651 NM_134471 ENSMUSG00000028678 Kif2c 4930402F02Rik|ESTM5|Knsl6|MCAK|X83316 kinesin family member 2C protein-coding common_peak2_127_773_0.379900440539826_9.78613997641432_7.00024381407786 chr11 94629129 94630789 + 7.00024381407786 NA 5' UTR (NM_133807, exon 1 of 7) 5' UTR (NM_133807, exon 1 of 7) 135 NM_133807 98238 Mm.172720 NM_133807 ENSMUSG00000020869 Lrrc59 AA959742|C78668 leucine rich repeat containing 59 protein-coding common_peak2_67_310_0.57599011321628_8.56876582673874_6.99921113711581 chr17 27856294 27857801 + 6.99921113711581 NA intron (NM_001080769, intron 1 of 20) CpG 540 NM_001080769 224648 Mm.291291 NM_001080769 ENSMUSG00000039512 Uhrf1bp1 1110020K19Rik|AA408674|F830021D11Rik|mKIAA4127 UHRF1 (ICBP90) binding protein 1 protein-coding common_peak2_67_310_0.57599011321628_8.56876582673874_6.99921113711581-2 chr9 75037492 75038542 + 6.99921113711581 NA intron (NM_021548, intron 1 of 2) CpG 285 NM_021548 59046 Mm.247837 NM_021548 ENSMUSG00000007656 Arpp19 19kDa|2700024H10Rik|ARPP-19|AW559096|Arpp12 cAMP-regulated phosphoprotein 19 protein-coding unique_peak2_62_599_-0.507209530544099_8.97521392522383_6.99789381487719 chr6 66534440 66536397 + 6.99789381487719 NA promoter-TSS (NM_019499) promoter-TSS (NM_019499) -50 NM_019499 56150 Mm.489653 NM_019499 ENSMUSG00000029910 Mad2l1 AA673185|MAD2 MAD2 mitotic arrest deficient-like 1 protein-coding common_peak1_17_31_1.50468536187267_5.75234268093633_6.99576933443237 chr6 127143574 127143979 + 6.99576933443237 NA intron (NM_009829, intron 3 of 4) intron (NM_009829, intron 3 of 4) -5613 NR_040274 77558 Mm.358918 NR_040273 ENSMUSG00000097166 9330179D12Rik - RIKEN cDNA 9330179D12 gene ncRNA unique_peak1_17_31_1.50468536187267_5.75234268093633_6.99576933443237 chr1 138270495 138270999 + 6.99576933443237 NA Intergenic Intergenic -2991 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_54_521_-0.546614978183969_8.7545985074779_6.99218821418657 chr4 53011311 53013128 + 6.99218821418657 NA intron (NM_025623, intron 1 of 5) CpG 295 NM_025623 66536 Mm.38244 NM_025623 ENSMUSG00000015247 Nipsnap3b 2700063N13Rik|Nipsnap3a nipsnap homolog 3B (C. elegans) protein-coding common_peak1_146_938_0.346029405410194_10.0479960503589_6.99209818622707 chr1 51934835 51935940 + 6.99209818622707 NA Intergenic Intergenic -19409 NM_001161817 17912 Mm.3390 NM_010863 ENSMUSG00000018417 Myo1b AA406997|MIH-L|MMIa myosin IB protein-coding common_peak1_205_2154_-0.255311959013364_10.9458161744698_6.99037422268136 chr2 164077114 164079573 + 6.99037422268136 NA intron (NM_021420, intron 1 of 10) intron (NM_021420, intron 1 of 10) 4165 NM_021420 58231 Mm.234472 NM_021420 ENSMUSG00000018209 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 protein-coding common_peak2_60_263_0.620125331688518_8.35445678520271_6.98995579334087 chr11 83736579 83738361 + 6.98995579334087 NA Intergenic L1MA4|LINE|L1 -9470 NM_183249 66107 Mm.902 NM_183249 ENSMUSG00000051748 Wfdc21 1100001G20Rik|Wdnm1-like WAP four-disulfide core domain 21 protein-coding common_peak2_44_163_0.768626632946548_7.74186532109136_6.98979725802392 chr16 92807430 92808632 + 6.98979725802392 NA intron (NM_001111022, intron 2 of 6) MTEb|LTR|ERVL-MaLR 18043 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_44_163_0.768626632946548_7.74186532109136_6.98979725802392 chr12 110496112 110496875 + 6.98979725802392 NA intron (NM_012023, intron 1 of 13) intron (NM_012023, intron 1 of 13) 10754 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak2_83_809_-0.431078831600777_9.4462386819716_6.98828669576614 chr5 24576863 24578731 + 6.98828669576614 NA promoter-TSS (NM_013853) promoter-TSS (NM_013853) -330 NM_013853 27407 Mm.21629 NM_013853 ENSMUSG00000028953 Abcf2 0710005O05Rik|Drr3|E430001O06 ATP-binding cassette, sub-family F (GCN20), member 2 protein-coding common_peak2_39_135_0.830283697566793_7.50260469003374_6.98702664749109 chr4 138913254 138914059 + 6.98702664749109 NA exon (NM_028453, exon 1 of 8) exon (NM_028453, exon 1 of 8) 291 NM_028453 73162 Mm.238081 NM_028453 ENSMUSG00000041161 Otud3 3110030K17Rik OTU domain containing 3 protein-coding common_peak2_128_782_0.376993189116192_9.80136509184914_6.98601935175126 chr1 57405788 57407411 + 6.98601935175126 NA promoter-TSS (NM_001081181) promoter-TSS (NM_001081181) 51 NM_001081181 68115 Mm.275428 NM_001081181 ENSMUSG00000025971 Maip1 9430016H08Rik|AA409999|C78988 matrix AAA peptidase interacting protein 1 protein-coding common_peak1_66_638_-0.489128420797272_9.07510791054836_6.98575674845795 chr4 152199777 152200980 + 6.98575674845795 NA intron (NM_001146058, intron 1 of 8) intron (NM_001146058, intron 1 of 8) 534 NM_001146058 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak1_110_633_0.415579137225288_9.51612859875205_6.98533981328792 chr2 80315197 80316412 + 6.98533981328792 NA 5' UTR (NM_024181, exon 1 of 23) 5' UTR (NM_024181, exon 1 of 23) 338 NM_024181 66861 Mm.21762 NM_024181 ENSMUSG00000027006 Dnajc10 1200006L06Rik|D2Ertd706e|ERdj5|JPDI DnaJ heat shock protein family (Hsp40) member C10 protein-coding common_peak2_78_387_0.522186248926189_8.86100596665022_6.98527045917108 chr19 6076579 6077832 + 6.98527045917108 NA promoter-TSS (NM_001081041) promoter-TSS (NM_001081041) -18 NM_001081041 68505 Mm.227361 NM_001081041 ENSMUSG00000024797 Vps51 1110014N23Rik|3110057M17Rik|AI837850|Ffr VPS51 GARP complex subunit protein-coding common_peak2_78_387_0.522186248926189_8.86100596665022_6.98527045917108-2 chr7 31085397 31086539 + 6.98527045917108 NA Intergenic Intergenic -9271 NM_008557 17178 Mm.263847 NM_008557 ENSMUSG00000057092 Fxyd3 Mat8 FXYD domain-containing ion transport regulator 3 protein-coding common_peak1_27_73_1.07711138438898_6.74800905782344_6.98457967897064-2 chr6 140516495 140517030 + 6.98457967897064 NA intron (NM_144920, intron 3 of 30) intron (NM_144920, intron 3 of 30) 92663 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak1_14_156_-1.11257662748028_6.73833243515149_6.98457967897064-2 chr9 41212514 41212916 + 6.98457967897064 NA intron (NR_040392, intron 2 of 4) intron (NR_040392, intron 2 of 4) 6560 NR_040392 78500 Mm.275715 NR_040392 ENSMUSG00000100837 1700063D05Rik - RIKEN cDNA 1700063D05 gene ncRNA common_peak1_14_156_-1.11257662748028_6.73833243515149_6.98457967897064 chr13 74317398 74317806 + 6.98457967897064 NA promoter-TSS (NM_011051) promoter-TSS (NM_011051) -276 NM_011051 18570 Mm.24254 NM_011051 ENSMUSG00000021576 Pdcd6 AV299538|Alg2|MA-3|PS2|alg-2 programmed cell death 6 protein-coding common_peak1_27_73_1.07711138438898_6.74800905782344_6.98457967897064 chr15 77733774 77734280 + 6.98457967897064 NA intron (NM_001168660, intron 1 of 2) MTB_Mm|LTR|ERVL-MaLR 4906 NM_001168660 71898 Mm.422856 NM_173743 ENSMUSG00000068246 Apol9b 2310016F22Rik apolipoprotein L 9b protein-coding common_peak2_115_1143_-0.357983399893108_9.98087963683184_6.98374811543518 chr7 24081214 24083307 + 6.98374811543518 NA intron (NM_001289637, intron 1 of 3) CpG 363 NM_001289637 210135 Mm.32254 NM_172483 ENSMUSG00000057101 Zfp180 2310040I01Rik|AI852378|D130011P11|HHZ168 zinc finger protein 180 protein-coding common_peak1_64_619_-0.499209884941342_9.02651946280357_6.98336511218188 chr14 8172369 8173203 + 6.98336511218188 NA exon (NM_024221, exon 2 of 10) exon (NM_024221, exon 2 of 10) 206 NM_024221 68263 Mm.301527 NM_024221 ENSMUSG00000021748 Pdhb 2610103L06Rik|AL024199|C81408 pyruvate dehydrogenase (lipoamide) beta protein-coding common_peak2_47_454_-0.589334955807606_8.53505525718225_6.98268328890639 chr2 154568986 154571329 + 6.98268328890639 NA promoter-TSS (NM_007891) promoter-TSS (NM_007891) -265 NM_007891 13555 Mm.18036 NM_007891 ENSMUSG00000027490 E2f1 E2F-1|mKIAA4009 E2F transcription factor 1 protein-coding common_peak1_160_1636_-0.294841693115174_10.5294177599166_6.98081701855142 chr1 162739527 162740659 + 6.98081701855142 NA intron (NM_001081290, intron 1 of 34) CpG 463 NM_001081290 226562 Mm.245446 NM_001081290 ENSMUSG00000040225 Prrc2c 1810043M20Rik|9630039I18Rik|A630006J20|Bat2d|Bat2d1|Bat2l2|E130112L15Rik|Prrc3|mKIAA1096 proline-rich coiled-coil 2C protein-coding common_peak2_103_577_0.433720184512966_9.39178577475716_6.98077817177128 chr2 91526543 91527659 + 6.98077817177128 NA Intergenic CpG -19221 NM_001165989 75786 Mm.168478 NM_029437 ENSMUSG00000040549 Ckap5 3110043H24Rik|4930432B04Rik|D730027C18Rik|T25636|mKIAA0097 cytoskeleton associated protein 5 protein-coding common_peak2_230_2451_-0.238887206764431_11.1402996603086_6.97926467713277 chr3 142495411 142498244 + 6.97926467713277 NA promoter-TSS (NM_153564) promoter-TSS (NM_153564) -107 NM_153564 229898 Mm.459245 NM_153564 ENSMUSG00000105504 Gbp5 5330409J06Rik|Gbp5a guanylate binding protein 5 protein-coding common_peak1_34_333_-0.702258577950518_8.03257500349879_6.97777462840275 chr6 86684050 86684757 + 6.97777462840275 NA promoter-TSS (NM_025665) promoter-TSS (NM_025665) 88 NM_025665 66618 Mm.182650 NM_025665 ENSMUSG00000001158 Snrnp27 2610209M04Rik|AI449063|AU022368|Ry1 small nuclear ribonucleoprotein 27 (U4/U6.U5) protein-coding common_peak1_29_288_-0.766269249902975_7.79179105754919_6.97773219296026 chrX 163909125 163909728 + 6.97773219296026 NA intron (NM_001290378, intron 1 of 4) CpG 409 NM_001290379 108012 Mm.426783 NM_026887 ENSMUSG00000031367 Ap1s2 1500012A13Rik|AI853648|EST1 adaptor-related protein complex 1, sigma 2 subunit protein-coding common_peak2_43_417_-0.620949078200576_8.39688459298059_6.97712993515167 chr3 104793679 104795472 + 6.97712993515167 NA TTS (NM_001291859) TTS (NM_001291859) 5541 NM_007484 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding common_peak1_70_678_-0.474108218397715_9.17021365504587_6.97711048390197 chr17 34587636 34588396 + 6.97711048390197 NA 3' UTR (NM_010929, exon 30 of 30) 3' UTR (NM_010929, exon 30 of 30) -1790 NM_134116 106512 Mm.26584 NM_134116 ENSMUSG00000034786 Gpsm3 AA960287|AGS4 G-protein signalling modulator 3 (AGS3-like, C. elegans) protein-coding common_peak2_42_407_-0.626698171717544_8.35907625611272_6.9697073011013 chr15 79062041 79063169 + 6.9697073011013 NA exon (NM_144849, exon 1 of 8) exon (NM_144849, exon 1 of 8) 254 NM_144849 223690 Mm.24262 NM_144849 ENSMUSG00000033055 Ankrd54 C730048E16Rik|EST1068184|EST475269|Liar ankyrin repeat domain 54 protein-coding common_peak1_22_51_1.23802108595242_6.3194502611173_6.96908772806502-2 chr9 54611299 54611822 + 6.96908772806502 NA intron (NM_053178, intron 11 of 13) intron (NM_053178, intron 11 of 13) 25049 NM_029573 67834 Mm.279195 NM_029573 ENSMUSG00000032279 Idh3a 1110003P10Rik|1500012E04Rik|AA407078|AI316514 isocitrate dehydrogenase 3 (NAD+) alpha protein-coding common_peak1_22_51_1.23802108595242_6.3194502611173_6.96908772806502 chr14 102810365 102810889 + 6.96908772806502 NA Intergenic Intergenic 172005 NR_039592 100628599 NR_039592 ENSMUSG00000092901 Mir5130 mir-5130|mmu-mir-5130|mu-mir-5130 microRNA 5130 ncRNA common_peak1_79_768_-0.442480937958338_9.36559931898266_6.96868458775094 chr9 107554636 107555492 + 6.96868458775094 NA intron (NM_019713, intron 1 of 4) CpG 481 NM_019713 56289 Mm.12091 NM_019713 ENSMUSG00000010067 Rassf1 123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family member 1 protein-coding common_peak2_79_768_-0.442480937958338_9.36559931898266_6.96868458775094 chr8 105854717 105856138 + 6.96868458775094 NA exon (NM_021513, exon 1 of 1) exon (NM_021513, exon 1 of 1) 324 NM_021513 59016 Mm.286598 NM_021513 ENSMUSG00000036442 Thap11 2810036E22Rik|AB041579|CTG-B43a|CTG-B45d|Ronin THAP domain containing 11 protein-coding common_peak1_32_315_-0.726460800516223_7.94055034791899_6.9672438687402 chr13 37642029 37642569 + 6.9672438687402 NA Intergenic B3A|SINE|B2 -183739 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding unique_peak2_18_190_-0.977064624638858_7.08889651571632_6.964576793434-3 chr8 124176794 124178149 + 6.964576793434 NA Intergenic MTE2a|LTR|ERVL-MaLR -53923 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak2_18_190_-0.977064624638858_7.08889651571632_6.964576793434-2 chr15 12578972 12580209 + 6.964576793434 NA intron (NM_001081064, intron 1 of 23) intron (NM_001081064, intron 1 of 23) 12966 NM_001081064 68070 Mm.423205 NM_001081064 ENSMUSG00000022197 Pdzd2 4930537L06Rik|A930022H17Rik|Gm21706|Gm82|Pdzk3|mKIAA0300 PDZ domain containing 2 protein-coding unique_peak2_18_190_-0.977064624638858_7.08889651571632_6.964576793434 chr14 31531193 31532561 + 6.964576793434 NA intron (NM_009937, intron 12 of 16) intron (NM_009937, intron 12 of 16) 36798 NM_028932 74427 Mm.491208 NM_028932 ENSMUSG00000021890 Eaf1 4933403C17Rik|AI666536 ELL associated factor 1 protein-coding common_peak1_86_446_0.488666809482535_9.04846442592459_6.96280876012483 chr11 53890792 53891773 + 6.96280876012483 NA exon (NM_011396, exon 1 of 10) exon (NM_011396, exon 1 of 10) 421 NM_011396 20520 Mm.42253 NM_011396 ENSMUSG00000018900 Slc22a5 Lstpl|Octn2|jvs solute carrier family 22 (organic cation transporter), member 5 protein-coding common_peak2_154_1569_-0.301761052166363_10.4656683176958_6.95994532748638 chr13 76017655 76019859 + 6.95994532748638 NA promoter-TSS (NM_001131068) promoter-TSS (NM_001131068) -45 NM_001131069 218341 Mm.266515 NM_178916 ENSMUSG00000043190 Rfesd AI256775|D030068K09 Rieske (Fe-S) domain containing protein-coding unique_peak2_9_112_-1.35565704597077_6.1423504394298_6.95860828040158 chr18 82244872 82245836 + 6.95860828040158 NA Intergenic Intergenic 161423 NM_008082 14427 Mm.6219 NM_008082 ENSMUSG00000024553 Galr1 Galnr1 galanin receptor 1 protein-coding unique_peak2_9_112_-1.35565704597077_6.1423504394298_6.95860828040158-2 chr5 113506150 113506896 + 6.95860828040158 NA Intergenic Intergenic -43897 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding unique_peak2_8_104_-1.43617246697981_5.99615928417622_6.95825297921611 chr19 61083815 61084762 + 6.95825297921611 NA intron (NM_018869, intron 12 of 15) intron (NM_018869, intron 12 of 15) 56552 NR_131956 414758 Mm.100056 NM_001001737 ENSMUSG00000074733 Zfp950 5830428H23Rik|AU016073|BC055757|Gm34518|Zfp826|mszf84 zinc finger protein 950 protein-coding common_peak2_82_798_-0.432545823759629_9.42577878104816_6.95490929325666 chr2 173451513 173453530 + 6.95490929325666 NA Intergenic Intergenic -70071 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding unique_peak2_35_113_0.898407658894282_7.28209384361188_6.95475289884546 chr5 122257697 122258901 + 6.95475289884546 NA intron (NR_104441, intron 3 of 12) intron (NR_104441, intron 3 of 12) 6161 NR_104441 654470 Mm.28804 NM_001039153 ENSMUSG00000038593 Tctn1 G730031O11Rik|Tect1 tectonic family member 1 protein-coding unique_peak1_28_78_1.04488256633547_6.82622203134484_6.95311021784276 chr9 107747149 107747734 + 6.95311021784276 NA intron (NM_148930, intron 17 of 24) intron (NM_148930, intron 17 of 24) 23561 NM_148930 83486 Mm.259197 NM_148930 ENSMUSG00000032580 Rbm5 D030069N10Rik RNA binding motif protein 5 protein-coding common_peak2_28_78_1.04488256633547_6.82622203134484_6.95311021784276 chr11 3535514 3536149 + 6.95311021784276 NA intron (NM_001284427, intron 2 of 19) CpG 3461 NM_013870 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding common_peak1_28_78_1.04488256633547_6.82622203134484_6.95311021784276 chr11 3535508 3536140 + 6.95311021784276 NA intron (NM_001284427, intron 2 of 19) CpG 3468 NM_013870 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding common_peak2_28_78_1.04488256633547_6.82622203134484_6.95311021784276-2 chr7 3415031 3415592 + 6.95311021784276 NA TTS (NR_128566) TTS (NR_128566) 245 NR_128566 104795667 NR_128566 ENSMUSG00000094210 Gm23450 Mir935|mmu-mir-935 predicted gene, 23450 ncRNA common_peak2_152_992_0.336155385752367_10.1237276004046_6.95278697372569 chr12 101912224 101913989 + 6.95278697372569 NA promoter-TSS (NM_028446) promoter-TSS (NM_028446) 65 NM_028446 109181 Mm.208618 NM_028446 ENSMUSG00000021188 Trip11 2610511G22Rik|3110031G15Rik|6030460N08Rik|AI450776|GMAP-210|TRIP230 thyroid hormone receptor interactor 11 protein-coding unique_peak2_51_206_0.688546598327963_8.03776025666331_6.95256466091898 chr7 100501911 100503225 + 6.95256466091898 NA TTS (NM_153527) TTS (NM_153527) 9210 NM_011671 22228 Mm.171378 NM_011671 ENSMUSG00000033685 Ucp2 Slc25a8 uncoupling protein 2 (mitochondrial, proton carrier) protein-coding common_peak1_16_173_-1.03940723487456_6.92323987841145_6.95146926545423 chr5 146829417 146829801 + 6.95146926545423 NA Intergenic Intergenic -3281 NM_019647 19933 Mm.316592 NM_019647 ENSMUSG00000041453 Rpl21 8430440E03Rik|L21 ribosomal protein L21 protein-coding common_peak1_69_667_-0.475646266764162_9.14588115909197_6.95091985211569 chr9 66882577 66883656 + 6.95091985211569 NA intron (NM_173413, intron 1 of 7) PB1D10|SINE|Alu 36589 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak1_24_243_-0.844722145426503_7.50837626484964_6.95075379715292-2 chr7 141414268 141414829 + 6.95075379715292 NA promoter-TSS (NM_172116) promoter-TSS (NM_172116) -423 NM_172116 213350 Mm.290953 NM_172116 ENSMUSG00000051007 Pddc1 BC023835|D230016J19Rik Parkinson disease 7 domain containing 1 protein-coding common_peak1_24_243_-0.844722145426503_7.50837626484964_6.95075379715292 chr2 11653707 11654349 + 6.95075379715292 NA intron (NM_008367, intron 1 of 7) B4A|SINE|B4 11236 NM_008367 16184 Mm.915 NM_008367 ENSMUSG00000026770 Il2ra CD25|Il2r|Ly-43 interleukin 2 receptor, alpha chain protein-coding common_peak1_23_55_1.20642054603449_6.41056519507485_6.95009031486834-2 chr1 40495817 40496277 + 6.95009031486834 NA intron (NM_008365, intron 10 of 10) L3|LINE|CR1 -19315 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding unique_peak1_23_55_1.20642054603449_6.41056519507485_6.95009031486834 chr3 65586511 65587035 + 6.95009031486834 NA Intergenic Intergenic -57359 NR_027955 71004 Mm.475465 NM_001033527 ENSMUSG00000074580 4931440P22Rik - RIKEN cDNA 4931440P22 gene ncRNA common_peak1_23_55_1.20642054603449_6.41056519507485_6.95009031486834-4 chr14 57888043 57888591 + 6.95009031486834 NA intron (NM_029492, intron 1 of 12) B1_Mur2|SINE|Alu 1945 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|ENSMUSG00000055956|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak1_23_55_1.20642054603449_6.41056519507485_6.95009031486834-3 chr12 104983090 104983751 + 6.95009031486834 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 15257 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding unique_peak1_23_55_1.20642054603449_6.41056519507485_6.95009031486834-2 chr6 128724601 128725116 + 6.95009031486834 NA Intergenic Intergenic -1812 NM_001099918 100043861 Mm.66911 NM_001099918 ENSMUSG00000079299 Klrb1 4930431A04Rik|Gm4696|Klrb1g|Klrb6|Ly-55|Ly55|NKR-P1G|Nkrp-1e|Nkrp1g killer cell lectin-like receptor subfamily B member 1 protein-coding common_peak1_23_55_1.20642054603449_6.41056519507485_6.95009031486834-5 chr18 65188397 65188899 + 6.95009031486834 NA intron (NM_031881, intron 18 of 29) Lx7|LINE|L1 -60213 NR_029600 387231 NR_029600 ENSMUSG00000065402 Mir122 Mir122a|Mirn122a|mir-122|mmu-mir-122 microRNA 122 ncRNA common_peak1_23_55_1.20642054603449_6.41056519507485_6.95009031486834 chr1 21306060 21306497 + 6.95009031486834 NA Intergenic Lx8|LINE|L1 -7966 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo unique_peak2_11_129_-1.23520465612271_6.4047654849671_6.95009031486831 chr17 18899376 18900432 + 6.95009031486831 NA Intergenic MMVL30-int|LTR|ERV1 -14418 NM_001104549 627367 Mm.384131 NM_001104549 ENSMUSG00000091491 Vmn2r97 EG627367|Vn2r97 vomeronasal 2, receptor 97 protein-coding common_peak1_138_868_0.358772413978201_9.9425985738035_6.94827085225248 chr11 25099978 25100310 + 6.94827085225248 NA Intergenic (CATTC)n|Simple_repeat|Simple_repeat -225963 NR_045853 71234 Mm.158627 NR_045853 ENSMUSG00000033015 4933427E13Rik - RIKEN cDNA 4933427E13 gene ncRNA common_peak1_440_4078_0.171145477424728_12.0795725305049_6.94695150056433 chr1 30948529 30950853 + 6.94695150056433 NA promoter-TSS (NR_002688) promoter-TSS (NR_002688) 19 NR_002688 433406 Mm.389003 NR_002688 Gm13363 OTTMUSG00000011595 predicted gene 13363 pseudo common_peak1_121_724_0.389294577331032_9.69648447356781_6.94676026608669 chr8 128653576 128655245 + 6.94676026608669 NA Intergenic Intergenic -31244 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_105_593_0.428034955828702_9.42833659871512_6.94527829464847 chr9 50855974 50857724 + 6.94527829464847 NA promoter-TSS (NM_001034085) promoter-TSS (NM_001034085) -75 NM_001034085 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak1_55_530_-0.539390989599871_8.78287255600422_6.94436592221756 chr13 59656495 59657473 + 6.94436592221756 NA intron (NM_001035122, intron 3 of 9) intron (NM_001035122, intron 3 of 9) 18800 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding common_peak1_21_216_-0.901753489750528_7.31067448756922_6.94428176528942 chr1 155083571 155084091 + 6.94428176528942 NA Intergenic Intergenic 15805 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_21_216_-0.901753489750528_7.31067448756922_6.94428176528942-2 chr10 128377078 128377552 + 6.94428176528942 NA intron (NM_172790, intron 1 of 27) CpG 191 NM_172790 237615 Mm.440177 NM_172790 ENSMUSG00000014498 Ankrd52 6430544C07|G431002C21Rik ankyrin repeat domain 52 protein-coding common_peak2_21_216_-0.901753489750528_7.31067448756922_6.94428176528942 chr1 91192647 91194211 + 6.94428176528942 NA intron (NM_178401, intron 1 of 2) intron (NM_178401, intron 1 of 2) 13607 NM_001168392 51801 Mm.3272 NM_016894 ENSMUSG00000034353 Ramp1 9130218E19Rik receptor (calcitonin) activity modifying protein 1 protein-coding common_peak2_270_2149_0.233346588870583_11.1867942389121_6.94361930086064 chr7 130545762 130547873 + 6.94361930086064 NA intron (NM_001162855, intron 1 of 10) CpG 564 NM_001162855 67872 Mm.21714 NM_001162855 ENSMUSG00000040331 Nsmce4a 2410003A14Rik NSE4 homolog A, SMC5-SMC6 complex component protein-coding common_peak2_43_158_0.773527098595951_7.69964650458233_6.94305386805466 chrX 140598721 140599886 + 6.94305386805466 NA intron (NM_001077364, intron 1 of 3) CpG 1219 NM_001077364 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding unique_peak2_12_138_-1.19013213926893_6.52387500308904_6.94267078629207-2 chr6 4163269 4164008 + 6.94267078629207 NA Intergenic Intergenic -76711 NM_009748 12068 Mm.286457 NM_009748 ENSMUSG00000032757 Bet1 AW555236|Bet-1 Bet1 golgi vesicular membrane trafficking protein protein-coding unique_peak2_12_138_-1.19013213926893_6.52387500308904_6.94267078629207 chr5 129008019 129008714 + 6.94267078629207 NA intron (NM_007941, intron 1 of 10) CpG 206 NM_001286033 13852 Mm.260716 NM_007941 ENSMUSG00000029428 Stx2 AW538950|Epim|G1-536-1|Syn-2|repro34 syntaxin 2 protein-coding common_peak1_12_138_-1.19013213926893_6.52387500308904_6.94267078629207 chr11 54464808 54465249 + 6.94267078629207 NA intron (NM_173753, intron 1 of 17) intron (NM_173753, intron 1 of 17) 26849 NM_173753 216742 Mm.34087 NM_173753 ENSMUSG00000035992 Fnip1 A730024A03Rik|AI838773|AW557298 folliculin interacting protein 1 protein-coding common_peak1_92_492_0.465372884509678_9.17813027863275_6.94266047214574 chr1 183368836 183369851 + 6.94266047214574 NA intron (NM_177389, intron 1 of 26) CpG 222 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding common_peak1_329_3677_-0.19266791868638_11.7483718050687_6.94100790465752 chr9 57642158 57645888 + 6.94100790465752 NA intron (NM_001304761, intron 2 of 14) intron (NM_001304761, intron 2 of 14) 1630 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak2_40_388_-0.642183079920767_8.28253480502581_6.94066579339268 chr8 119829836 119832037 + 6.94066579339268 NA intron (NM_028071, intron 2 of 3) intron (NM_028071, intron 2 of 3) 9643 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak1_129_1293_-0.334095070473255_10.1705743667559_6.93823323396588 chr2 165316810 165318908 + 6.93823323396588 NA intron (NM_080287, intron 1 of 20) intron (NM_080287, intron 1 of 20) -1508 NM_001302754 140579 Mm.35064 NM_080287 ENSMUSG00000017670 Elmo2 1190002F24Rik|CED-12 engulfment and cell motility 2 protein-coding common_peak2_34_108_0.913261389746608_7.22481501965023_6.93734809547202-2 chr6 140516254 140517171 + 6.93734809547202 NA intron (NM_144920, intron 3 of 30) intron (NM_144920, intron 3 of 30) 92613 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak2_34_108_0.913261389746608_7.22481501965023_6.93734809547202 chr1 131196443 131197377 + 6.93734809547202 NA intron (NM_018750, intron 2 of 5) intron (NM_018750, intron 2 of 5) 3275 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak1_78_757_-0.443954947057776_9.3440765646422_6.93705888743454 chr15 68362209 68363302 + 6.93705888743454 NA Intergenic (CCGCG)n|Simple_repeat|Simple_repeat -21466 NR_029718 387228 NR_029718 ENSMUSG00000065437 Mir30d Mirn30d|mir-30d|mmu-mir-30d microRNA 30d ncRNA common_peak2_78_757_-0.443954947057776_9.3440765646422_6.93705888743454 chr15 103453077 103454925 + 6.93705888743454 NA intron (NM_153505, intron 1 of 30) intron (NM_153505, intron 1 of 30) 176 NM_153505 105855 Mm.30805 NM_153505 ENSMUSG00000022488 Nckap1l 4930568P13Rik|AI463083|Hem1|Hemp1 NCK associated protein 1 like protein-coding common_peak2_36_119_0.872893055602892_7.34333712340996_6.93557902150531 chr17 84161134 84162112 + 6.93557902150531 NA Intergenic Intergenic 26324 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_194_1382_0.287463595335685_10.5773172388183_6.93510203279389 chr16 93832093 93833643 + 6.93510203279389 NA intron (NM_001045529, intron 1 of 16) intron (NM_001045529, intron 1 of 16) 747 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak2_130_1303_-0.331640892384204_10.182907708039_6.93378131955163 chr11 100821460 100823536 + 6.93378131955163 NA promoter-TSS (NM_011489) promoter-TSS (NM_011489) 72 NM_011489 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding common_peak1_60_579_-0.515389638967962_8.92221427053095_6.93334671506432 chr19 53806670 53807412 + 6.93334671506432 NA intron (NM_001170847, intron 1 of 13) intron (NM_001170847, intron 1 of 13) -85190 NM_011050 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak1_29_83_1.01633900981894_6.90048692768823_6.93192534269005 chr5 148781108 148781581 + 6.93192534269005 NA intron (NR_131106, intron 2 of 2) RMER17A2|LTR|ERVK 3381 NR_131106 78015 Mm.243839 NR_131106 ENSMUSG00000085740 4930505K14Rik - RIKEN cDNA 4930505K14 gene ncRNA common_peak1_302_3334_-0.202488336313206_11.6022268779153_6.93013172434416 chr3 60471994 60475577 + 6.93013172434416 NA intron (NM_001253713, intron 2 of 9) intron (NM_001253713, intron 2 of 9) 955 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_57_549_-0.528012182713097_8.83928171705547_6.92741664351834 chr19 5570810 5571977 + 6.92741664351834 NA TTS (NM_001033448) TTS (NM_001033448) 3319 NM_001033448 381201 Mm.441906 NM_001033448 ENSMUSG00000049562 Ap5b1 Gm962 adaptor-related protein complex 5, beta 1 subunit protein-coding common_peak2_82_417_0.502146737087465_8.95843250062462_6.9252941916039 chr8 69394943 69396052 + 6.9252941916039 NA promoter-TSS (NR_038044) promoter-TSS (NR_038044) 47 NR_038044 378466 Mm.37846 NM_194351 ENSMUSG00000110444 Gm10033 9330175B10Rik|ENSMUSG00000057924|Gm10311 predicted gene 10033 ncRNA common_peak2_279_3047_-0.212364539410718_11.467464917788_6.92525056381489 chr8 47712690 47715646 + 6.92525056381489 NA promoter-TSS (NM_172407) promoter-TSS (NM_172407) -237 NM_172407 70925 Mm.393807 NM_172407 ENSMUSG00000038069 Cdkn2aip 4921511I16Rik|AW208986|CARF CDKN2A interacting protein protein-coding common_peak1_19_198_-0.945490392912872_7.16387942408721_6.92448533319137 chr4 101261242 101261750 + 6.92448533319137 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 3786 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_33_103_0.929708854019435_7.16529414515081_6.92448533319137 chr11 74564767 74565541 + 6.92448533319137 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 25004 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_33_103_0.929708854019435_7.16529414515081_6.92448533319137-2 chr2 25110631 25111391 + 6.92448533319137 NA Intergenic Intergenic -15806 NM_172204 241275 Mm.218774 NM_172204 ENSMUSG00000036805 Noxa1 NY-CO-31|SDCCAG31 NADPH oxidase activator 1 protein-coding common_peak1_468_5518_-0.156111360776505_12.3521354898034_6.92432332796569 chr1 156034886 156038249 + 6.92432332796569 NA promoter-TSS (NM_144791) promoter-TSS (NM_144791) -87 NM_001160018 208263 Mm.211654 NM_144791 ENSMUSG00000026466 Tor1aip1 LAP1|Lap1B torsin A interacting protein 1 protein-coding unique_peak2_44_425_-0.608530982661206_8.43044412889524_6.92386289177606 chr15 66444435 66446727 + 6.92386289177606 NA intron (NM_019457, intron 7 of 11) L2|LINE|L2 55329 NM_019457 54562 Mm.244890 NM_019457 ENSMUSG00000022375 Lrrc6 LRTP leucine rich repeat containing 6 (testis) protein-coding common_peak1_38_369_-0.658438010908452_8.20216245506209_6.92001790719993 chr17 31223308 31223953 + 6.92001790719993 NA intron (NM_177823, intron 6 of 13) MLT1B|LTR|ERVL-MaLR 15564 NM_177823 328795 Mm.387930 NM_177823 ENSMUSG00000042345 Ubash3a 5830413C03Rik|C330001M22|Sts-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing, A protein-coding common_peak1_30_88_0.990948773767909_6.97120781785035_6.91956554861952 chr1 134405794 134406357 + 6.91956554861952 NA promoter-TSS (NM_028057) promoter-TSS (NM_028057) 85 NM_028057 72017 Mm.280230 NM_028057 ENSMUSG00000026456 Cyb5r1 1500005G05Rik|B5R.1|C80155|Nqo3a2 cytochrome b5 reductase 1 protein-coding common_peak1_50_200_0.696619085948528_7.99936123415319_6.91924304499572 chr17 26531969 26532662 + 6.91924304499572 NA Intergenic Intergenic -23843 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak2_50_200_0.696619085948528_7.99936123415319_6.91924304499572 chr8 120526330 120527711 + 6.91924304499572 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) -8837 NM_001145897 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_66_637_-0.486868913615146_9.0739781569573_6.91866803869506 chr2 29639817 29641205 + 6.91866803869506 NA intron (NM_054050, intron 1 of 23) MIRb|SINE|MIR 20791 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_39_379_-0.652109069513815_8.24380107357404_6.91835273850365 chr1 151685221 151686047 + 6.91835273850365 NA intron (NM_022018, intron 5 of 13) L3|LINE|CR1 -69740 NM_001311165 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding common_peak1_110_634_0.413305385705167_9.51726547451211_6.91800142185184 chr15 8108680 8110066 + 6.91800142185184 NA promoter-TSS (NM_133227) promoter-TSS (NM_133227) 60 NM_133227 170762 Mm.295168 NM_133227 ENSMUSG00000022142 Nup155 D930027M19Rik|mKIAA0791 nucleoporin 155 protein-coding common_peak1_54_520_-0.543848543892592_8.75321529033221_6.91798465310643-2 chr6 129739761 129740626 + 6.91798465310643 NA intron (NM_177155, intron 1 of 5) intron (NM_177155, intron 1 of 5) 291 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak1_54_520_-0.543848543892592_8.75321529033221_6.91798465310643 chr4 129500427 129501429 + 6.91798465310643 NA Intergenic CpG 9738 NM_001085491 68233 Mm.424983 NM_001085491 ENSMUSG00000078554 Fam229a 1700125D06Rik family with sequence similarity 229, member A protein-coding common_peak1_32_98_0.94796332758127_7.10333828387024_6.91675074809266 chr5 92093480 92094065 + 6.91675074809266 NA Intergenic Intergenic -10028 NM_001080795 23881 Mm.290530 NM_011816 ENSMUSG00000029405 G3bp2 AA409541|E430034L04Rik|G3BP|mKIAA0660 GTPase activating protein (SH3 domain) binding protein 2 protein-coding common_peak2_32_98_0.94796332758127_7.10333828387024_6.91675074809266 chr6 41557521 41558317 + 6.91675074809266 NA Intergenic Intergenic 36143 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak2_69_324_0.563762117794074_8.62617696681285_6.91566056297415 chr3 116807611 116808984 + 6.91566056297415 NA promoter-TSS (NM_001081326) promoter-TSS (NM_001081326) -131 NM_001081326 77559 Mm.237099 NM_001081326 ENSMUSG00000033400 Agl 1110061O17Rik|9430004C13Rik|9630046L06Rik|AI850929|C77197 amylo-1,6-glucosidase, 4-alpha-glucanotransferase protein-coding common_peak1_85_439_0.490979767915645_9.02684959748248_6.91527581972191 chr10 80015383 80016565 + 6.91527581972191 NA promoter-TSS (NM_001142701) promoter-TSS (NM_001142701) -698 NM_001142701 70719 Mm.243954 NM_027521 ENSMUSG00000035697 Hmha1 6330406L22Rik|AW539505|Ha-1 histocompatibility (minor) HA-1 protein-coding common_peak2_139_1401_-0.318600297114378_10.2939704854534_6.91293971045797 chr18 82558560 82561053 + 6.91293971045797 NA intron (NM_001025258, intron 1 of 4) intron (NM_001025258, intron 1 of 4) 5298 NM_001025254 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_177_1221_0.304602110131814_10.4073296248846_6.91078023513457 chr12 44209099 44210815 + 6.91078023513457 NA promoter-TSS (NR_049203) promoter-TSS (NR_049203) 111 NM_013760 27362 Mm.27432 NM_013760 ENSMUSG00000014905 Dnajb9 AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7 DnaJ heat shock protein family (Hsp40) member B9 protein-coding common_peak2_103_578_0.431226329024408_9.39303270250144_6.91030046879242 chr15 4026062 4027634 + 6.91030046879242 NA non-coding (NR_028266, exon 1 of 2) non-coding (NR_028266, exon 1 of 2) 420 NM_024188 67041 Mm.13445 NM_024188 ENSMUSG00000022186 Oxct1 2610008O03Rik|Oxct|Oxct2a|Scot-s 3-oxoacid CoA transferase 1 protein-coding common_peak1_103_578_0.431226329024408_9.39303270250144_6.91030046879242 chr15 75861613 75863064 + 6.91030046879242 NA promoter-TSS (NM_026960) promoter-TSS (NM_026960) -1 NM_026960 69146 Mm.27385 NM_026960 ENSMUSG00000022575 Gsdmd 1810036L03Rik|AW558049|DF5L|Dfna5l|Gsdmdc1|M2-4 gasdermin D protein-coding common_peak2_119_708_0.3922392377309_9.66576143610497_6.90998742486736 chr2 181591708 181593522 + 6.90998742486736 NA promoter-TSS (NM_001164597) promoter-TSS (NM_001164597) -154 NM_001164597 269401 Mm.386888 NM_001164597 ENSMUSG00000000823 Zfp512b Gm632|Znf512b zinc finger protein 512B protein-coding common_peak1_271_2161_0.231834697984945_11.1940681567271_6.90962607156798 chr18 36285910 36288230 + 6.90962607156798 NA 5' UTR (NM_008989, exon 2 of 2) 5' UTR (NM_008989, exon 2 of 2) 5908 NM_008989 19290 Mm.231802 NM_008989 ENSMUSG00000043991 Pura CAGER-1|Pur-alpha|ssCRE-BP purine rich element binding protein A protein-coding common_peak1_294_2407_0.220012315160444_11.3436258343399_6.90703517906661 chr17 71001305 71003305 + 6.90703517906661 NA 5' UTR (NM_026064, exon 1 of 4) 5' UTR (NM_026064, exon 1 of 4) 228 NM_026064 67268 Mm.489605 NM_026064 ENSMUSG00000024048 Myl12a 2900073G15Rik|AI838292|C80200 myosin, light chain 12A, regulatory, non-sarcomeric protein-coding common_peak2_130_800_0.371428829438162_9.83137284712779_6.90656350768314 chr5 98029979 98031778 + 6.90656350768314 NA promoter-TSS (NM_133738) promoter-TSS (NM_133738) 84 NM_133738 71914 Mm.24842 NM_133738 ENSMUSG00000029338 Antxr2 2310046B19Rik|AW561899|CMG-2|CMG2|cI-35 anthrax toxin receptor 2 protein-coding common_peak2_344_3869_-0.187416943906658_11.8244093790784_6.90550354437677 chr7 19000101 19005104 + 6.90550354437677 NA TTS (NM_145579) TTS (NM_145579) -1463 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding common_peak1_325_2746_0.20681556003187_11.5270489750918_6.90538285763314 chr15 83148273 83150441 + 6.90538285763314 NA promoter-TSS (NR_004432) promoter-TSS (NR_004432) -21 NM_178627 73826 Mm.23758 NM_178627 ENSMUSG00000041815 Poldip3 1110008P04Rik|AA408269|AL022852|C77954|PDIP46|SKAR|mKIAA1649 polymerase (DNA-directed), delta interacting protein 3 protein-coding common_peak1_51_492_-0.563410280550624_8.6637386961026_6.90443780408053 chr6 125215513 125216262 + 6.90443780408053 NA intron (NM_001080557, intron 1 of 3) CpG 306 NM_001080557 22317 Mm.32321 NM_009496 ENSMUSG00000030337 Vamp1 Syb-1|Syb1|VAMP-1|lew vesicle-associated membrane protein 1 protein-coding common_peak1_111_642_0.41111444506269_9.53423214985929_6.90441450388497 chr13 73603412 73604826 + 6.90441450388497 NA 5' UTR (NM_146047, exon 1 of 17) 5' UTR (NM_146047, exon 1 of 17) 117 NM_146047 218335 Mm.30099 NM_146047 ENSMUSG00000021610 Clptm1l C130052I12Rik|Crr9 CLPTM1-like protein-coding common_peak1_84_818_-0.426077793788517_9.46468074474675_6.90338533899711 chrX 167110835 167112268 + 6.90338533899711 NA Intergenic Intergenic -41181 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak2_47_453_-0.586160708012462_8.53346813328468_6.90331052680498 chr5 88726941 88728622 + 6.90331052680498 NA intron (NM_026735, intron 1 of 5) IMPB_01|Satellite|Satellite 6910 NM_026735 68473 Mm.35764 NM_026735 ENSMUSG00000006262 Mob1b 1110003E08Rik|AU015450|B230364F10|Mobkl1a MOB kinase activator 1B protein-coding common_peak1_67_311_0.571358664484634_8.57108155110457_6.9032811576698 chr17 86957376 86958618 + 6.9032811576698 NA Intergenic Intergenic -5114 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak1_118_1173_-0.350144322870408_10.0221445316748_6.90236618298134 chr10 88420016 88421680 + 6.90236618298134 NA intron (NM_001004164, intron 7 of 20) intron (NM_001004164, intron 7 of 20) -38739 NM_011517 20962 Mm.297977 NM_011517 ENSMUSG00000020059 Sycp3 Cor1|Scp3 synaptonemal complex protein 3 protein-coding common_peak1_37_360_-0.668878512303924_8.16141577073521_6.90184187713327 chrX 164017467 164018132 + 6.90184187713327 NA intron (NM_181315, intron 1 of 7) ID_B1|SINE|B4 10211 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak1_163_1092_0.320590201766233_10.254372786555_6.90145009844547 chr15 73747347 73749276 + 6.90145009844547 NA 5' UTR (NM_008975, exon 1 of 6) 5' UTR (NM_008975, exon 1 of 6) 285 NM_008975 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak1_46_176_0.73552553734302_7.83536831875451_6.90103494453749 chr10 75314438 75315274 + 6.90103494453749 NA Intergenic Intergenic -2021 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak2_46_176_0.73552553734302_7.83536831875451_6.90103494453749 chr12 69461677 69462580 + 6.90103494453749 NA Intergenic Intergenic 13422 NR_038060 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak2_88_462_0.478149985503952_9.09394337601221_6.90042752962269 chr4 128805125 128806938 + 6.90042752962269 NA promoter-TSS (NM_001081098) promoter-TSS (NM_001081098) 81 NM_001081098 230761 Mm.22616 NM_001081098 ENSMUSG00000028799 Zfp362 - zinc finger protein 362 protein-coding common_peak1_215_1588_0.268141091050143_10.7679739548736_6.900397985807 chr12 26067518 26069328 + 6.900397985807 NA Intergenic Intergenic 142082 NR_131149 629481 Mm.390460 NR_131149 Gm29687 - predicted gene, 29687 ncRNA unique_peak2_10_121_-1.29755190605529_6.28196138453524_6.90035440223786-2 chr5 117286874 117287661 + 6.90035440223786 NA intron (NM_018858, intron 1 of 3) intron (NM_018858, intron 1 of 3) 297 NM_018858 23980 Mm.195898 NM_018858 ENSMUSG00000032959 Pebp1 HCNP|Pbp|Pbp1|Pbpr|Rkip phosphatidylethanolamine binding protein 1 protein-coding unique_peak2_10_121_-1.29755190605529_6.28196138453524_6.90035440223786 chr12 115193756 115194436 + 6.90035440223786 NA Intergenic Intergenic 501698 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA common_peak1_152_993_0.334703251718453_10.1244536674215_6.89904104711132 chr15 99701828 99702977 + 6.89904104711132 NA exon (NM_031842, exon 1 of 13) exon (NM_031842, exon 1 of 13) 115 NM_031842 83797 Mm.273756 NM_031842 ENSMUSG00000023018 Smarcd1 AA407987|Baf60a|D15Kz1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 protein-coding common_peak1_222_2353_-0.242414731084041_11.0796912394964_6.89708894466832 chr2 166329004 166331732 + 6.89708894466832 NA Intergenic Intergenic 56460 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 OTTMUSG00000001131 predicted gene 11468 ncRNA common_peak1_165_1110_0.318475078965612_10.2768806408719_6.89628964140882 chr4 145234818 145237503 + 6.89628964140882 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 10710 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_52_212_0.681032145217274_8.07522569283448_6.89606573968443 chr10 59702501 59703419 + 6.89606573968443 NA intron (NM_001291443, intron 1 of 12) intron (NM_001291443, intron 1 of 12) 397 NM_001291443 216001 Mm.27199 NM_144822 ENSMUSG00000020111 Micu1 C730016L05Rik|Calc|Cbara1 mitochondrial calcium uptake 1 protein-coding common_peak1_35_341_-0.686554841826874_8.07457509397246_6.89606573968433 chr5 142905157 142905724 + 6.89606573968433 NA exon (NM_007393, exon 3 of 6) exon (NM_007393, exon 3 of 6) 1314 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_220_2329_-0.243573063492638_11.0643277077953_6.8945205609241 chr10 10184081 10187375 + 6.8945205609241 NA Intergenic Intergenic -284688 NM_001081344 78808 Mm.331751 NM_030191 ENSMUSG00000019790 Stxbp5 0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006 syntaxin binding protein 5 (tomosyn) protein-coding unique_peak1_20_43_1.3180430251612_6.1184531312179_6.89316937448748 chr7 25716769 25717292 + 6.89316937448748 NA intron (NM_028771, intron 1 of 4) B1_Mur3|SINE|Alu 2023 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak2_116_683_0.399225450875248_9.61746524032352_6.89282311266634 chr10 127266241 127267399 + 6.89282311266634 NA intron (NM_027151, intron 1 of 13) CpG 558 NM_001190453 69654 Mm.167537 NM_027151 ENSMUSG00000025410 Dctn2 2310042E05Rik|C130077D06Rik|C87049|DCTN-50|GMP23-48K|RBP50|p50 dynactin 2 protein-coding common_peak1_104_586_0.428363537566767_9.41139846189344_6.8927440896499 chr15 4026107 4027743 + 6.8927440896499 NA non-coding (NR_028266, exon 1 of 2) non-coding (NR_028266, exon 1 of 2) 481 NR_028266 414066 Mm.394461 NR_028266 BC037032 - cDNA Sequence BC037032 ncRNA common_peak1_53_510_-0.54835960291167_8.72299967948179_6.89253235868795 chr8 85080235 85081185 + 6.89253235868795 NA promoter-TSS (NM_026399) promoter-TSS (NM_026399) 36 NM_026399 67836 Mm.334680 NM_026399 ENSMUSG00000005150 Wdr83 1500041N16Rik|Morg1 WD repeat domain containing 83 protein-coding common_peak1_73_706_-0.459170442411633_9.23598118360358_6.8897933886732 chr12 57230460 57231214 + 6.8897933886732 NA intron (NM_001164370, intron 1 of 9) CpG 412 NM_001164370 73490 Mm.268180 NM_001164370 ENSMUSG00000047022 Mipol1 1700081O04Rik|6030439O22Rik|AU021838|AW536152|D12Ertd19e mirror-image polydactyly 1 protein-coding common_peak1_73_706_-0.459170442411633_9.23598118360358_6.8897933886732-2 chr15 100686017 100687249 + 6.8897933886732 NA intron (NM_033612, intron 2 of 7) intron (NM_033612, intron 2 of 7) 1287 NM_033612 109901 Mm.2131 NM_033612 ENSMUSG00000023031 Cela1 1810009A17Rik|1810062B19Rik|Ela-1|Ela1|PC-TsF chymotrypsin-like elastase family, member 1 protein-coding common_peak1_28_278_-0.775457997316619_7.73639231317088_6.88887291123335-2 chr7 90146033 90146643 + 6.88887291123335 NA intron (NM_001252520, intron 1 of 20) intron (NM_001252520, intron 1 of 20) 16106 NM_001252520 233489 Mm.235175 NM_146194 ENSMUSG00000039361 Picalm CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114 phosphatidylinositol binding clathrin assembly protein protein-coding common_peak1_28_278_-0.775457997316619_7.73639231317088_6.88887291123335 chr1 13559611 13560264 + 6.88887291123335 NA Intergenic Intergenic 29973 NM_028173 72265 Mm.28765 NM_028173 ENSMUSG00000025935 Tram1 1810049E02Rik|TRAMP translocating chain-associating membrane protein 1 protein-coding common_peak2_574_5753_0.144322472110861_12.5625107417947_6.88768688385998 chr6 91107703 91117560 + 6.88768688385998 NA intron (NM_018815, intron 1 of 39) MTD|LTR|ERVL-MaLR 4195 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak1_71_686_-0.46625630457272_9.19103813653174_6.88603054661012 chr3 90604140 90605522 + 6.88603054661012 NA intron (NM_011311, intron 1 of 2) intron (NM_011311, intron 1 of 2) 1061 NM_011311 20198 Mm.3925 NM_011311 ENSMUSG00000001020 S100a4 18A2|42a|Capl|FSp1|Mts1|PeL98|metastasin|pk9a S100 calcium binding protein A4 protein-coding common_peak2_60_264_0.61467090159641_8.35718400024877_6.88601560695383 chr2 131509938 131510868 + 6.88601560695383 NA intron (NM_145533, intron 1 of 6) intron (NM_145533, intron 1 of 6) 18541 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak1_36_351_-0.679647967425886_8.11960763492435_6.88572737180752 chr1 36765426 36766269 + 6.88572737180752 NA intron (NM_001289766, intron 1 of 12) intron (NM_001289766, intron 1 of 12) -1087 NM_001289765 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak2_136_1368_-0.322569174723041_10.2576221438964_6.88530467565377 chr9 73112709 73114578 + 6.88530467565377 NA intron (NM_198609, intron 1 of 5) CpG 174 NM_198609 225215 Mm.379366 NM_198609 ENSMUSG00000032215 Rsl24d1 2410159K22Rik ribosomal L24 domain containing 1 protein-coding common_peak2_303_2505_0.215642748820455_11.3989920737321_6.88475251863583 chr12 69360906 69362891 + 6.88475251863583 NA Intergenic Intergenic -4722 NM_025441 66244 Mm.46705 NM_025441 ENSMUSG00000020982 Nemf 1500011I12Rik|4933405E14Rik|Sdccag1 nuclear export mediator factor protein-coding common_peak2_121_725_0.387306024237578_9.69747875011454_6.8839434716616 chr6 4600351 4601925 + 6.8839434716616 NA promoter-TSS (NM_145398) promoter-TSS (NM_145398) 72 NM_145398 213819 Mm.270703 NM_145398 ENSMUSG00000015189 Casd1 Cas1|Cast1 CAS1 domain containing 1 protein-coding common_peak2_65_627_-0.490688490044391_9.04927650386943_6.88285809517623 chr15 62455872 62458262 + 6.88285809517623 NA Intergenic Intergenic -237616 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_65_627_-0.490688490044391_9.04927650386943_6.88285809517623 chr10 44268390 44269375 + 6.88285809517623 NA intron (NM_053069, intron 1 of 7) intron (NM_053069, intron 1 of 7) 543 NM_053069 11793 Mm.22264 NM_053069 ENSMUSG00000038160 Atg5 2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy autophagy related 5 protein-coding common_peak1_23_233_-0.85658925149131_7.44207009383775_6.88138812068458 chr5 124861980 124862483 + 6.88138812068458 NA promoter-TSS (NM_001081750) promoter-TSS (NM_001081750) -10 NM_144819 215707 Mm.389693 NM_144819 ENSMUSG00000037979 Ccdc92 AW050178|D5Bwg0834e coiled-coil domain containing 92 protein-coding common_peak1_246_2641_-0.228045632775105_11.2533919348593_6.88054599475622 chr9 21002352 21004004 + 6.88054599475622 NA intron (NM_023167, intron 2 of 8) CpG-14743 441 NM_023167 66163 Mm.427576 NM_023167 ENSMUSG00000003299 Mrpl4 1110017G11Rik mitochondrial ribosomal protein L4 protein-coding unique_peak1_18_35_1.43043920195458_5.8851446024196_6.88047028022273-2 chr5 72796121 72796618 + 6.88047028022273 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) -43592 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding unique_peak1_18_35_1.43043920195458_5.8851446024196_6.88047028022273 chr4 45441969 45442482 + 6.88047028022273 NA intron (NM_001033306, intron 5 of 5) intron (NM_001033306, intron 5 of 5) -33459 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding unique_peak1_18_35_1.43043920195458_5.8851446024196_6.88047028022273-3 chr6 98997959 98998445 + 6.88047028022273 NA intron (NM_001197321, intron 8 of 17) intron (NM_001197321, intron 8 of 17) 30096 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_18_35_1.43043920195458_5.8851446024196_6.88047028022273 chr14 75194945 75195390 + 6.88047028022273 NA intron (NM_008879, intron 2 of 16) B3|SINE|B2 -47120 NM_019775 56373 Mm.24242 NM_019775 ENSMUSG00000021999 Cpb2 1110032P04Rik|4930405E17Rik|AI255929|CPR|Cpu|TAFI carboxypeptidase B2 (plasma) protein-coding common_peak1_187_1942_-0.267714475786613_10.790212947692_6.8799975083507 chr8 122281996 122283931 + 6.8799975083507 NA intron (NM_009569, intron 1 of 9) intron (NM_009569, intron 1 of 9) 822 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_81_410_0.505060992570099_8.93552507996673_6.87936061368044 chr1 39841699 39843572 + 6.87936061368044 NA intron (NR_040465, intron 4 of 4) intron (NR_040465, intron 4 of 4) 4695 NR_040465 73426 Mm.396239 NR_040465 ENSMUSG00000101634 1700066B17Rik - RIKEN cDNA 1700066B17 gene ncRNA unique_peak2_29_287_-0.761268568844609_7.78929071702001_6.8784555791442 chr4 32179379 32180679 + 6.8784555791442 NA Intergenic Intergenic 215922 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_88_858_-0.413495952374275_9.53976634495132_6.87787457044218 chr14 101639730 101641111 + 6.87787457044218 NA promoter-TSS (NM_001168592) promoter-TSS (NM_001168592) 51 NM_001033132 66200 Mm.250474 NM_001033132 ENSMUSG00000075486 Commd6 1110059J08Rik|1700063H17Rik COMM domain containing 6 protein-coding common_peak1_88_858_-0.413495952374275_9.53976634495132_6.87787457044218 chr9 5308660 5310017 + 6.87787457044218 NA intron (NM_007609, intron 1 of 8) intron (NM_007609, intron 1 of 8) 489 NM_007609 12363 Mm.1569 NM_007609 ENSMUSG00000033538 Casp4 CASP-11|CASP-4|Casp11|Caspl|ich-3 caspase 4, apoptosis-related cysteine peptidase protein-coding common_peak1_33_323_-0.709701430724097_7.98499928752258_6.8773262822755 chr2 158706461 158707177 + 6.8773262822755 NA intron (NM_153089, intron 2 of 10) B1F|SINE|Alu 39684 NM_001159662 228852 Mm.150540 NM_153089 ENSMUSG00000037754 Ppp1r16b ANKRD4|C130078N17Rik|TIMAP|Wdt4 protein phosphatase 1, regulatory (inhibitor) subunit 16B protein-coding common_peak1_200_2093_-0.257367510627803_10.9033619716169_6.87666143781946 chr10 8129404 8131824 + 6.87666143781946 NA Intergenic Intergenic -174491 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_67_647_-0.483089119537741_9.09830544311575_6.87644826515696 chr4 139622809 139623368 + 6.87644826515696 NA 5' UTR (NM_175438, exon 1 of 15) 5' UTR (NM_175438, exon 1 of 15) 194 NM_175438 212647 Mm.273571 NM_175438 ENSMUSG00000028737 Aldh4a1 A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1 aldehyde dehydrogenase 4 family, member A1 protein-coding common_peak1_105_594_0.425608218434162_9.42954996741239_6.87593376771651 chr9 35199241 35200713 + 6.87593376771651 NA promoter-TSS (NM_001177847) promoter-TSS (NM_001177847) -12 NM_054096 117149 Mm.23987 NM_054096 ENSMUSG00000032041 Tirap AA407980|C130027E04Rik|Mal|Tlr4ap|Wyatt toll-interleukin 1 receptor (TIR) domain-containing adaptor protein protein-coding common_peak2_105_594_0.425608218434162_9.42954996741239_6.87593376771651 chr13 46718800 46722312 + 6.87593376771651 NA intron (NM_175749, intron 1 of 21) (GAAA)n|Simple_repeat|Simple_repeat 7293 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak1_331_2814_0.203811284573471_11.5608248492543_6.8748543224114 chr11 98544163 98547300 + 6.8748543224114 NA intron (NM_011771, intron 1 of 7) CpG 300 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding common_peak1_154_1567_-0.299922052502581_10.4647488178639_6.87444140760285 chr15 68257999 68259530 + 6.87444140760285 NA promoter-TSS (NM_198644) promoter-TSS (NM_198644) 92 NM_001145888 380993 Mm.309526 NM_198644 ENSMUSG00000022335 Zfat Gm922|Zfat1|Zfp406 zinc finger and AT hook domain containing protein-coding common_peak1_223_1668_0.261633444214395_10.8355849614698_6.87295924656574 chr12 85704447 85706559 + 6.87295924656574 NA intron (NM_016767, intron 2 of 2) intron (NM_016767, intron 2 of 2) 18783 NM_016767 53314 Mm.6672 NM_016767 ENSMUSG00000034266 Batf B-ATF|SFA-2 basic leucine zipper transcription factor, ATF-like protein-coding common_peak1_30_296_-0.74763691606646_7.84050066276754_6.8725129952279 chr9 114753031 114753555 + 6.8725129952279 NA Intergenic Intergenic 22090 NM_026036 67213 Mm.28858 NM_026036 ENSMUSG00000032434 Cmtm6 2810051A14Rik|AA536733|Cklfsf6 CKLF-like MARVEL transmembrane domain containing 6 protein-coding unique_peak2_32_314_-0.7218880707264_7.93826398302408_6.8723144953557 chr1 164082065 164083982 + 6.8723144953557 NA Intergenic Intergenic 20947 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak1_58_559_-0.523756611903142_8.8674047109934_6.87125763612686 chr3 75557128 75558023 + 6.87125763612686 NA promoter-TSS (NM_009250) promoter-TSS (NM_009250) 42 NM_009250 20713 Mm.41560 NM_009250 ENSMUSG00000027834 Serpini1 AI837402|Ns|PI-12|PI12|Spi17 serine (or cysteine) peptidase inhibitor, clade I, member 1 protein-coding common_peak2_58_559_-0.523756611903142_8.8674047109934_6.87125763612686 chr6 124374470 124376441 + 6.87125763612686 NA Intergenic Intergenic -10969 NR_131162 72268 Mm.420740 NR_131162 1700027F06Rik - RIKEN cDNA 1700027F06 gene ncRNA common_peak1_24_60_1.1552778545735_6.50837626484964_6.87108572130321 chr11 95006782 95007328 + 6.87108572130321 NA TTS (NM_172261) TTS (NM_172261) -2824 NM_146025 217125 Mm.297199 NM_146025 ENSMUSG00000047181 Samd14 AI839049|AI854782|BC034054 sterile alpha motif domain containing 14 protein-coding common_peak1_31_305_-0.734522268381127_7.89012670850209_6.87059619842489 chr7 35396432 35397022 + 6.87059619842489 NA promoter-TSS (NM_028120) promoter-TSS (NM_028120) 40 NM_178643 101831 Mm.389855 NM_178643 ENSMUSG00000030493 Faap24 AW124591|AW538696|C230052I12Rik Fanconi anemia core complex associated protein 24 protein-coding common_peak2_253_2725_-0.223746841444811_11.3006964260828_6.86968334093015 chr9 78174859 78177567 + 6.86968334093015 NA intron (NR_040401, intron 1 of 3) intron (NR_040401, intron 1 of 3) 299 NR_040401 320295 Mm.131285 NR_040401 ENSMUSG00000097574 C920006O11Rik - RIKEN cDNA C920006O11 gene ncRNA common_peak1_173_1185_0.307521847306205_10.3656492181991_6.868779040757 chr19 45659327 45660795 + 6.868779040757 NA 5' UTR (NM_013907, exon 1 of 9) 5' UTR (NM_013907, exon 1 of 9) 132 NM_013907 30838 Mm.254739 NM_013907 ENSMUSG00000040913 Fbxw4 Dac|Fbw4|SHFM3|SHSF3|dactylin|dactylyn F-box and WD-40 domain protein 4 protein-coding common_peak2_121_1205_-0.344882429666756_10.0635729770667_6.86861066307077 chr15 75920394 75922475 + 6.86861066307077 NA exon (NM_025412, exon 1 of 6) exon (NM_025412, exon 1 of 6) 126 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik pyrroline-5-carboxylate reductase-like protein-coding common_peak2_66_304_0.577878267699475_8.54160456629999_6.86804369600346 chr11 86256861 86258127 + 6.86804369600346 NA promoter-TSS (NM_027421) promoter-TSS (NM_027421) 74 NM_027421 70422 Mm.171304 NM_027421 ENSMUSG00000018068 Ints2 2810417D08Rik|AA408260|AI987735|mKIAA1287 integrator complex subunit 2 protein-coding common_peak1_66_304_0.577878267699475_8.54160456629999_6.86804369600346 chr14 56668280 56669068 + 6.86804369600346 NA intron (NM_023773, intron 1 of 13) CpG 426 NM_023773 75339 Mm.152466 NM_023773 ENSMUSG00000079184 Mphosph8 1500035L22Rik|4930548G07Rik|AU040635 M-phase phosphoprotein 8 protein-coding common_peak1_388_3465_0.184062074826908_11.8510869765736_6.86799525056182 chr3 95227719 95231858 + 6.86799525056182 NA intron (NM_001038708, intron 1 of 4) intron (NM_001038708, intron 1 of 4) 845 NM_001038708 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding common_peak1_301_3320_-0.202269311330801_11.5962673518373_6.86552243587818 chr19 28010127 28012531 + 6.86552243587818 NA promoter-TSS (NM_011265) promoter-TSS (NM_011265) -163 NM_011265 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak2_128_784_0.373312842628243_9.80320526509311_6.86505766554521 chr11 84828149 84829958 + 6.86505766554521 NA promoter-TSS (NR_046281) promoter-TSS (NR_046281) -50 NM_177564 192970 Mm.192213 NM_177564 ENSMUSG00000034449 Dhrs11 - dehydrogenase/reductase (SDR family) member 11 protein-coding common_peak1_86_837_-0.418008603033499_9.5018021321826_6.86476376739631 chr5 145280394 145281102 + 6.86476376739631 NA Intergenic CpG -2595 NM_001081431 666311 Mm.260773 NM_001081431 ENSMUSG00000070420 Zscan25 EG666311|Zfp498 zinc finger and SCAN domain containing 25 protein-coding common_peak2_72_346_0.543527173807368_8.71055543948194_6.86454326338656 chr11 9009996 9011775 + 6.86454326338656 NA 5' UTR (NM_001303610, exon 1 of 7) 5' UTR (NM_001303610, exon 1 of 7) 306 NM_001303610 15574 Mm.42201 NM_008316 ENSMUSG00000020413 Hus1 - HUS1 checkpoint clamp component protein-coding common_peak1_454_4250_0.166864085959192_12.1370185866188_6.86301244585087 chr15 81585219 81587296 + 6.86301244585087 NA promoter-TSS (NM_177821) promoter-TSS (NM_177821) 43 NM_177821 328572 Mm.258397 NM_177821 ENSMUSG00000055024 Ep300 A430090G16|A730011L11|KAT3B|p300|p300 HAT E1A binding protein p300 protein-coding common_peak2_443_4117_0.169414675105152_12.0924354521848_6.8628141252792 chr1 30948334 30951041 + 6.8628141252792 NA promoter-TSS (NR_002688) promoter-TSS (NR_002688) 23 NR_002688 433406 Mm.389003 NR_002688 Gm13363 OTTMUSG00000011595 predicted gene 13363 pseudo common_peak1_49_472_-0.573068870016654_8.59916193833107_6.86177196109953 chr11 11740476 11741281 + 6.86177196109953 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 50701 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_49_472_-0.573068870016654_8.59916193833107_6.86177196109953 chr13 67305698 67307007 + 6.86177196109953 NA promoter-TSS (NM_001003666) promoter-TSS (NM_001003666) 60 NM_001003666 431706 Mm.439456 NM_001003666 ENSMUSG00000055341 Zfp457 Rslcan-6 zinc finger protein 457 protein-coding common_peak1_117_1162_-0.351496665245037_10.0078870488507_6.86070259941889 chr8 13677728 13678899 + 6.86070259941889 NA promoter-TSS (NM_009025) promoter-TSS (NM_009025) -726 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_62_597_-0.502392514246322_8.97280541707494_6.85963206477206 chrX 167049017 167051448 + 6.85963206477206 NA Intergenic ID_B1|SINE|B4 20138 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak1_54_225_0.661112055970728_8.15073499040055_6.85893013297527 chr16 14361291 14362203 + 6.85893013297527 NA intron (NM_008576, intron 1 of 30) CpG 189 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding common_peak1_178_1232_0.301587501019929_10.4187508349128_6.85774562491292 chr11 70220134 70222479 + 6.85774562491292 NA promoter-TSS (NM_172371) promoter-TSS (NM_172371) -312 NM_172371 69309 Mm.93266 NM_172371 ENSMUSG00000044367 Slc16a13 1700007D07Rik solute carrier family 16 (monocarboxylic acid transporters), member 13 protein-coding common_peak2_48_188_0.714633812689612_7.91955933056588_6.85755589218379 chr7 28013697 28014705 + 6.85755589218379 NA promoter-TSS (NM_001254951) promoter-TSS (NM_001254951) -86 NM_001254951 100043772 Mm.129275 NM_001100456 ENSMUSG00000096916 Zfp850 C130069I09Rik|Gm4636 zinc finger protein 850 protein-coding common_peak2_48_188_0.714633812689612_7.91955933056588_6.85755589218379-2 chr7 120981872 120983093 + 6.85755589218379 NA promoter-TSS (NM_007672) promoter-TSS (NM_007672) -27 NM_028955 74466 Mm.189707 NM_028955 ENSMUSG00000030877 Mfsd13b 4933427G17Rik major facilitator superfamily domain containing 13B protein-coding common_peak1_57_548_-0.525386713306274_8.83796898235206_6.85545944925483 chr8 3676522 3677141 + 6.85545944925483 NA intron (NM_025701, intron 1 of 1) intron (NM_025701, intron 1 of 1) 354 NM_025701 66682 Mm.29090 NM_025701 ENSMUSG00000040236 Trappc5 4021401A16Rik|TRS31 trafficking protein particle complex 5 protein-coding common_peak1_45_434_-0.599798475456225_8.46497235300798_6.85497797777149 chr13 19518255 19519108 + 6.85497797777149 NA Intergenic Intergenic -14314 NR_131037 319466 NR_131037 9330199G10Rik - RIKEN cDNA 9330199G10 gene ncRNA common_peak1_45_434_-0.599798475456225_8.46497235300798_6.85497797777149-2 chr2 103566195 103566901 + 6.85497797777149 NA 5' UTR (NM_178890, exon 1 of 17) 5' UTR (NM_178890, exon 1 of 17) 238 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_45_434_-0.599798475456225_8.46497235300798_6.85497797777149 chr9 78442256 78444098 + 6.85497797777149 NA promoter-TSS (NM_173386) promoter-TSS (NM_173386) 60 NR_125721 214763 Mm.101559 NM_173386 ENSMUSG00000032344 Mb21d1 E330016A19Rik|cGAS Mab-21 domain containing 1 protein-coding common_peak2_4_69_-1.8913734116869_5.18359631110152_6.85410014385384 chr13 51716084 51716679 + 6.85410014385384 NA intron (NM_001281880, intron 7 of 16) MTD|LTR|ERVL-MaLR 64673 NM_029279 75420 Mm.275981 NM_029279 ENSMUSG00000035139 Secisbp2 2210413N07Rik|2810012K13Rik|SBP2 SECIS binding protein 2 protein-coding common_peak1_232_1759_0.254751847349189_10.9087356371993_6.85274330285216 chr9 44482369 44484619 + 6.85274330285216 NA Intergenic Intergenic -15642 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding unique_peak2_20_207_-0.922965074342594_7.23895718096979_6.85080937510556-2 chrX 50565347 50566462 + 6.85080937510556 NA intron (NR_015505, intron 19 of 19) intron (NR_015505, intron 19 of 19) 28515 NR_131207 102639259 Mm.350898 NR_131207 Gm35612 - predicted gene, 35612 ncRNA unique_peak2_20_207_-0.922965074342594_7.23895718096979_6.85080937510556 chr4 115280265 115281533 + 6.85080937510556 NA Intergenic ORR1D1|LTR|ERVL-MaLR -18147 NM_177406 277753 Mm.276106 NM_177406 ENSMUSG00000066071 Cyp4a12a BC025936|Cyp4a12 cytochrome P450, family 4, subfamily a, polypeptide 12a protein-coding common_peak2_20_207_-0.922965074342594_7.23895718096979_6.85080937510556 chr3 78966759 78967405 + 6.85080937510556 NA Intergenic CpG 177805 NM_001310536 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak2_14_155_-1.1033580974509_6.7337231701368_6.85070589613664 chr2 145122507 145123535 + 6.85070589613664 NA Intergenic IAPEz-int|LTR|ERVK -119590 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding common_peak1_213_2245_-0.247559481858472_11.0093624714714_6.8495992680863 chr19 6363754 6364848 + 6.8495992680863 NA intron (NR_122118, intron 1 of 11) CpG 611 NR_122118 22668 Mm.256422 NM_011750 ENSMUSG00000024949 Sf1 BBP|MZFM|WBP4|Zfp162 splicing factor 1 protein-coding unique_peak1_21_47_1.2748352419728_6.22238012170755_6.84806584434903 chr10 80685545 80686076 + 6.84806584434903 NA 3' UTR (NM_172457, exon 4 of 4) 3' UTR (NM_172457, exon 4 of 4) -9517 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak2_84_817_-0.424315185089258_9.46379944039712_6.84444371711569 chr17 44701906 44704194 + 6.84444371711569 NA intron (NR_073392, intron 4 of 7) B4|SINE|B4 33126 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak2_124_1236_-0.338509005961667_10.1033752819955_6.84442720290267 chr15 99251182 99252930 + 6.84442720290267 NA promoter-TSS (NM_016766) promoter-TSS (NM_016766) -95 NM_016766 51812 Mm.383472 NM_016766 ENSMUSG00000037570 Mcrs1 C78274|ICP22BP|MSP58|P78 microspherule protein 1 protein-coding unique_peak2_24_242_-0.838797311469397_7.50541384787108_6.84307812379151 chr19 4794078 4794817 + 6.84307812379151 NA promoter-TSS (NM_001290125) promoter-TSS (NM_001290125) -438 NM_001290123 19653 Mm.426069 NM_009032 ENSMUSG00000094936 Rbm4 4921506I22Rik|Lark1|Mlark|Rbm4a|lark RNA binding motif protein 4 protein-coding common_peak1_39_136_0.819714455856606_7.50788931088883_6.84307812379151 chr16 16146116 16146818 + 6.84307812379151 NA intron (NM_146068, intron 1 of 19) intron (NM_146068, intron 1 of 19) 384 NM_146068 224008 Mm.244703 NM_146068 ENSMUSG00000041974 Spidr 2310008H04Rik|Kiaa0146 scaffolding protein involved in DNA repair protein-coding common_peak1_18_189_-0.969491404934057_7.08510990586392_6.84306249322529 chr9 32661857 32662360 + 6.84306249322529 NA Intergenic B4A|SINE|B4 -33934 NM_011808 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_77_382_0.51835517886926_8.84037817135959_6.84122470057358 chr19 29812327 29813356 + 6.84122470057358 NA exon (NM_177721, exon 1 of 1) exon (NM_177721, exon 1 of 1) 133 NM_177721 240614 Mm.125503 NM_177721 ENSMUSG00000074909 Ranbp6 C630001B19 RAN binding protein 6 protein-coding unique_peak1_16_28_1.5455552658466_5.63075862805087_6.84058895536445 chr1 97625360 97625710 + 6.84058895536445 NA Intergenic Intergenic 36483 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding unique_peak1_16_28_1.5455552658466_5.63075862805087_6.84058895536445-2 chr2 167496927 167497267 + 6.84058895536445 NA intron (NM_030743, intron 1 of 7) intron (NM_030743, intron 1 of 7) -4223 NM_170756 263876 Mm.34342 NM_170756 ENSMUSG00000047030 Spata2 AI504642|mKIAA0757 spermatogenesis associated 2 protein-coding unique_peak1_16_28_1.5455552658466_5.63075862805087_6.84058895536445-3 chr9 105134054 105134464 + 6.84058895536445 NA Intergenic Intergenic -2454 NM_029385 75686 Mm.305810 NM_029385 ENSMUSG00000032565 Nudt16 2310041H06Rik|2810047L04Rik|2900006H04Rik|AI851783 nudix (nucleoside diphosphate linked moiety X)-type motif 16 protein-coding common_peak2_136_1367_-0.321514958351038_10.2570950357104_6.83972359084566 chr18 49754965 49756660 + 6.83972359084566 NA promoter-TSS (NM_001170960) promoter-TSS (NM_001170960) -211 NM_001170960 68857 Mm.96010 NM_026854 ENSMUSG00000024505 Dtwd2 1190002H09Rik|8030470C17Rik|AI414673|BB115449 DTW domain containing 2 protein-coding common_peak1_119_1183_-0.347572310658533_10.0356672102997_6.83961271623567 chr6 128622048 128624144 + 6.83961271623567 NA promoter-TSS (NM_001159902) promoter-TSS (NM_001159902) -162 NM_010737 17057 Mm.16729 NM_010737 ENSMUSG00000030361 Klrb1a Ly55a|NKR-P1.7|NKR-P1A|NKRP12|Nkrp1-a|Nkrp1a|ly-55A killer cell lectin-like receptor subfamily B member 1A protein-coding common_peak1_59_258_0.618460456097505_8.32603851573531_6.83913534464374 chr2 144230418 144231471 + 6.83913534464374 NA Intergenic Intergenic 35258 NR_030762 100313519 Mm.453538 NR_030762 ENSMUSG00000077714 Snord17 MBI-43 small nucleolar RNA, C/D box 17 snoRNA unique_peak2_5_78_-1.74322990245772_5.43216579694824_6.83732084461052 chr5 145233023 145233714 + 6.83732084461052 NA intron (NM_028298, intron 1 of 3) intron (NM_028298, intron 1 of 3) 1609 NM_028298 72611 Mm.206555 NM_028298 ENSMUSG00000007812 Zfp655 2700038I16Rik|9030409O18Rik|mKIAA4222 zinc finger protein 655 protein-coding common_peak2_90_878_-0.407374312423357_9.57603219893173_6.83604134669729 chrX 167200102 167203245 + 6.83604134669729 NA Intergenic Intergenic 7545 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_153_1555_-0.30029249302677_10.4534800984728_6.83563203782849 chr19 53899269 53900991 + 6.83563203782849 NA intron (NM_011050, intron 1 of 11) intron (NM_011050, intron 1 of 11) -3221 NM_001168492 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak2_82_796_-0.428930044822124_9.42397089157941_6.83533730347835 chr10 80754088 80756231 + 6.83533730347835 NA promoter-TSS (NM_199322) promoter-TSS (NM_199322) -47 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak2_59_568_-0.517016098522522_8.89377679304532_6.83141905888976 chr8 107047865 107049402 + 6.83141905888976 NA promoter-TSS (NM_026513) promoter-TSS (NM_026513) -19 NM_026513 68023 Mm.482335 NM_026513 ENSMUSG00000078931 Pdf 2610019N19Rik peptide deformylase (mitochondrial) protein-coding common_peak1_239_1831_0.249289578059829_10.9638485771269_6.8311441848559 chr8 117526250 117528147 + 6.8311441848559 NA intron (NM_172285, intron 2 of 32) intron (NM_172285, intron 2 of 32) 28907 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak2_73_353_0.53879041231477_8.73700075624038_6.83099288993461 chr16 15593754 15595117 + 6.83099288993461 NA promoter-TSS (NM_023585) promoter-TSS (NM_023585) 83 NM_001159351 70620 Mm.235407 NM_023585 ENSMUSG00000022674 Ube2v2 1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2 ubiquitin-conjugating enzyme E2 variant 2 protein-coding common_peak1_21_215_-0.895089759469517_7.30734262242871_6.83028825285652 chr6 122758371 122758864 + 6.83028825285652 NA Intergenic B1_Mur1|SINE|Alu -15872 NM_011401 20527 Mm.395108 NM_011401 ENSMUSG00000003153 Slc2a3 AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3 solute carrier family 2 (facilitated glucose transporter), member 3 protein-coding common_peak2_155_1577_-0.297713418032885_10.475024780997_6.82832726209759 chr4 59243054 59246633 + 6.82832726209759 NA Intergenic Intergenic -15208 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA unique_peak1_26_69_1.09292454989463_6.67574529189228_6.82739469890748 chr2 113829685 113830315 + 6.82739469890748 NA promoter-TSS (NM_009162) promoter-TSS (NM_009162) -909 NM_009162 20394 Mm.4836 NM_009162 ENSMUSG00000023236 Scg5 7B2|AI325031|Sgne-1|Sgne1 secretogranin V protein-coding common_peak1_26_69_1.09292454989463_6.67574529189228_6.82739469890748 chr6 91684882 91685427 + 6.82739469890748 NA intron (NM_009320, intron 1 of 14) intron (NM_009320, intron 1 of 14) 1087 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak1_61_587_-0.506377828915701_8.94648343037851_6.82625075491286-2 chr6 129588193 129589082 + 6.82625075491286 NA Intergenic Intergenic -3174 NM_010654 16643 Mm.391515 NM_010654 ENSMUSG00000030165 Klrd1 CD94 killer cell lectin-like receptor, subfamily D, member 1 protein-coding common_peak1_61_587_-0.506377828915701_8.94648343037851_6.82625075491286 chr2 166401459 166402347 + 6.82625075491286 NA Intergenic Intergenic -45548 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak1_71_339_0.548519048107677_8.68365046019154_6.8244813230456 chr14 55478649 55479646 + 6.8244813230456 NA intron (NM_001037938, intron 1 of 7) intron (NM_001037938, intron 1 of 7) 389 NM_030686 28200 Mm.27427 NM_030686 ENSMUSG00000022210 Dhrs4 AI043103|AI790593|CR|D14Ucla2|NDRD|PHCR|PSCD|RRD|mouNRDR dehydrogenase/reductase (SDR family) member 4 protein-coding common_peak2_71_339_0.548519048107677_8.68365046019154_6.8244813230456 chr2 19300246 19301870 + 6.8244813230456 NA intron (NM_001271565, intron 17 of 17) intron (NM_001271565, intron 17 of 17) -43259 NR_126563 108871 Mm.107666 NR_126563 4930447M23Rik - RIKEN cDNA 4930447M23 gene ncRNA unique_peak2_16_172_-1.03109196666255_6.91908224430545_6.82442773897766 chr19 3388763 3389551 + 6.82442773897766 NA promoter-TSS (NM_001286557) promoter-TSS (NM_001286557) -221 NM_001286557 17771 Mm.209941 NM_010841 ENSMUSG00000024905 Mtl5 tesmin metallothionein-like 5, testis-specific (tesmin) protein-coding unique_peak2_16_172_-1.03109196666255_6.91908224430545_6.82442773897766-2 chrX 81647089 81648003 + 6.82442773897766 NA Intergenic IAPEz-int|LTR|ERVK -189424 NM_173435 245492 Mm.109633 NM_173435 ENSMUSG00000060673 4930595M18Rik - RIKEN cDNA 4930595M18 gene protein-coding common_peak1_16_172_-1.03109196666255_6.91908224430545_6.82442773897766 chr10 128745133 128745596 + 6.82442773897766 NA Intergenic Intergenic -1308 NM_016811 13139 Mm.291235 NM_016811 ENSMUSG00000025357 Dgka 80kDa|AW146112|Dagk1 diacylglycerol kinase, alpha protein-coding common_peak1_16_172_-1.03109196666255_6.91908224430545_6.82442773897766-2 chr19 11446378 11446818 + 6.82442773897766 NA intron (NM_021718, intron 1 of 6) intron (NM_021718, intron 1 of 6) 3040 NM_021718 60361 Mm.33957 NM_021718 ENSMUSG00000056290 Ms4a4b AI463180|Chandra|Ly116 membrane-spanning 4-domains, subfamily A, member 4B protein-coding common_peak2_172_1768_-0.279507801197909_10.6489644320915_6.82362613551223 chr2 11184511 11188949 + 6.82362613551223 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 14348 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_97_532_0.445496825337864_9.28074013542811_6.82349303474928 chr7 45069973 45071137 + 6.82349303474928 NA intron (NM_001163684, intron 1 of 8) PB1D7|SINE|Alu 8126 NM_025533 66394 Mm.272139 NM_025533 ENSMUSG00000003421 Nosip 2310061K06Rik|CGI-25 nitric oxide synthase interacting protein protein-coding common_peak2_268_2132_0.231690871228436_11.1745136859548_6.82338153574226 chr9 95954040 95955760 + 6.82338153574226 NA exon (NM_011916, exon 1 of 42) exon (NM_011916, exon 1 of 42) 140 NM_001311130 24127 Mm.291179 NM_011916 ENSMUSG00000032410 Xrn1 Dhm2|exo|mXrn1 5'-3' exoribonuclease 1 protein-coding common_peak1_139_1399_-0.316540774936083_10.2929407243643_6.82280240005499 chr2 45116310 45117935 + 6.82280240005499 NA Intergenic CpG -3843 NM_015753 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak2_69_325_0.559329871478813_8.62839308997048_6.82237906745062 chr4 145249235 145250929 + 6.82237906745062 NA Intergenic Intergenic -3212 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak2_7_95_-1.51532154878234_5.82730172632998_6.82185248959163-3 chrX 157596218 157597013 + 6.82185248959163 NA intron (NM_172307, intron 1 of 10) intron (NM_172307, intron 1 of 10) 2100 NM_172307 270669 Mm.37577 NM_172307 ENSMUSG00000046873 Mbtps2 9630032G22Rik|AI662535 membrane-bound transcription factor peptidase, site 2 protein-coding unique_peak2_7_95_-1.51532154878234_5.82730172632998_6.82185248959163-2 chr9 66300483 66301446 + 6.82185248959163 NA Intergenic ORR1E|LTR|ERVL-MaLR -49486 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding unique_peak2_7_95_-1.51532154878234_5.82730172632998_6.82185248959163 chr9 14262194 14263026 + 6.82185248959163 NA Intergenic Intergenic -13691 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_71_685_-0.464154781927434_9.1899873752091_6.82179426679795 chr2 165206709 165209570 + 6.82179426679795 NA intron (NM_174988, intron 1 of 11) (TC)n|Simple_repeat|Simple_repeat 26598 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak2_26_259_-0.80016024618886_7.62228768993402_6.82131457637036 chr1 138856129 138857078 + 6.82131457637036 NA exon (NM_001081226, exon 1 of 3) exon (NM_001081226, exon 1 of 3) 251 NM_001081226 69549 Mm.264673 NM_001081226 ENSMUSG00000079283 2310009B15Rik - RIKEN cDNA 2310009B15 gene protein-coding common_peak1_26_259_-0.80016024618886_7.62228768993402_6.82131457637036 chr10 96214185 96214728 + 6.82131457637036 NA Intergenic Intergenic -11751 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_121_1204_-0.343685668883996_10.0629745966753_6.82012037007081 chr7 25658063 25660012 + 6.82012037007081 NA promoter-TSS (NM_007533) promoter-TSS (NM_007533) -116 NM_138586 27998 Mm.27853 NM_138586 ENSMUSG00000061286 Exosc5 D7Wsu180e exosome component 5 protein-coding common_peak1_53_509_-0.545533558832908_8.7215866574424_6.81809851933434 chr9 80265939 80266915 + 6.81809851933434 NA intron (NM_001039546, intron 16 of 32) (TG)n|Simple_repeat|Simple_repeat 101393 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding unique_peak2_13_146_-1.13971990600479_6.62981239183397_6.81809226512405-3 chrX 48136669 48137746 + 6.81809226512405 NA TTS (NM_133213) TTS (NM_133213) -9229 NM_001313749 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding unique_peak2_13_146_-1.13971990600479_6.62981239183397_6.81809226512405 chr15 75982060 75982670 + 6.81809226512405 NA promoter-TSS (NM_001163518) promoter-TSS (NM_001163518) -80 NM_146059 223648 Mm.17610 NM_146059 ENSMUSG00000098176 Ccdc166 2410075B13Rik coiled-coil domain containing 166 protein-coding unique_peak2_13_146_-1.13971990600479_6.62981239183397_6.81809226512405-2 chr4 141917672 141918733 + 6.81809226512405 NA intron (NM_177868, intron 22 of 31) intron (NM_177868, intron 22 of 31) -43282 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak2_94_509_0.454116353416353_9.22141161356704_6.81730519697749 chr9 90232589 90235254 + 6.81730519697749 NA intron (NM_194334, intron 3 of 12) intron (NM_194334, intron 3 of 12) 36848 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak1_65_626_-0.488389373954803_9.04812694582464_6.81570910335482 chr11 96915696 96916501 + 6.81570910335482 NA intron (NM_001308183, intron 2 of 12) intron (NM_001308183, intron 2 of 12) 416 NM_001308183 80280 Mm.28297 NM_030248 ENSMUSG00000018669 Cdk5rap3 1810007E24Rik|BC002318|C53|C81486|HSF-27|IC53|LZAP|MST016 CDK5 regulatory subunit associated protein 3 protein-coding common_peak1_65_626_-0.488389373954803_9.04812694582464_6.81570910335482-2 chr18 12235717 12236435 + 6.81570910335482 NA intron (NM_008720, intron 1 of 24) intron (NM_008720, intron 1 of 24) 310 NM_008720 18145 Mm.3484 NM_008720 ENSMUSG00000024413 Npc1 A430089E03Rik|C85354|D18Ertd139e|D18Ertd723e|lcsd|nmf164|spm Niemann-Pick type C1 protein-coding common_peak1_37_359_-0.664876581746427_8.15941480545646_6.81338109061118-2 chr3 28244309 28245095 + 6.81338109061118 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -18512 NM_001163007 665113 Mm.126193 NM_026910 ENSMUSG00000027692 Tnik 1500031A17Rik|4831440I19Rik|AI451411|C530008O15Rik|C630040K21Rik TRAF2 and NCK interacting kinase protein-coding common_peak1_37_359_-0.664876581746427_8.15941480545646_6.81338109061118 chr12 3959930 3960577 + 6.81338109061118 NA exon (NM_001278583, exon 4 of 4) exon (NM_001278583, exon 4 of 4) 5308 NM_001278583 18976 Mm.277996 NM_008895 ENSMUSG00000020660 Pomc ACTH|BE|Beta-LPH|Clip|Gamma-LPH|Npp|Pomc-1|Pomc1|alpha-MSH|alphaMSH|beta-MSH|gamma-MSH pro-opiomelanocortin-alpha protein-coding common_peak1_212_1560_0.269039240022392_10.7427744419891_6.81298445002566 chr5 108131465 108132926 + 6.81298445002566 NA promoter-TSS (NM_028481) promoter-TSS (NM_028481) 396 NM_028876 73130 Mm.363960 NM_028876 ENSMUSG00000063406 Tmed5 3110020O18Rik|4432412D15Rik transmembrane p24 trafficking protein 5 protein-coding common_peak2_37_125_0.84969659108333_7.40212821904158_6.81219213392922 chr13 52551107 52552004 + 6.81219213392922 NA Intergenic Intergenic -20719 NM_001024474 68203 Mm.29362 NM_001024474 ENSMUSG00000047842 Diras2 2900052J15Rik|AI414999 DIRAS family, GTP-binding RAS-like 2 protein-coding unique_peak1_25_65_1.11102712528248_6.59990768199969_6.81051696080709 chr2 150582064 150582646 + 6.81051696080709 NA TTS (NM_027977) TTS (NM_027977) 11940 NM_009977 13011 Mm.12965 NM_009977 ENSMUSG00000068129 Cst7 Cmap cystatin F (leukocystatin) protein-coding common_peak2_25_65_1.11102712528248_6.59990768199969_6.81051696080709 chr7 80500680 80501307 + 6.81051696080709 NA intron (NM_007550, intron 7 of 21) B3|SINE|B2 34005 NM_007550 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding common_peak2_109_1075_-0.363559032984352_9.88968284606445_6.80872575691612 chr5 134550683 134553075 + 6.80872575691612 NA intron (NM_001039162, intron 1 of 15) CpG 555 NM_001039162 269713 Mm.255138 NM_009990 ENSMUSG00000063146 Clip2 B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4 CAP-GLY domain containing linker protein 2 protein-coding common_peak1_527_5157_0.151173134617091_12.4081826250978_6.8082794219006 chr8 22805250 22809607 + 6.8082794219006 NA Intergenic Intergenic -1774 NM_001122820 64933 Mm.390023 NM_029505 ENSMUSG00000031539 Ap3m2 5830445E16Rik|AP-3B adaptor-related protein complex 3, mu 2 subunit protein-coding common_peak1_180_1252_0.298036616154501_10.4401890073991_6.80617048810137 chr1 153085502 153087177 + 6.80617048810137 NA exon (NM_175460, exon 5 of 11) exon (NM_175460, exon 5 of 11) 100108 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding unique_peak2_19_197_-0.938222392448833_7.16024542385519_6.80573297742623 chr8 71475712 71476992 + 6.80573297742623 NA TTS (NM_025600) TTS (NM_025600) 7158 NR_122114 66498 Mm.260360 NM_025600 ENSMUSG00000074247 Dda1 1500034J01Rik|1700095J19Rik|R74921 DET1 and DDB1 associated 1 protein-coding common_peak1_19_197_-0.938222392448833_7.16024542385519_6.80573297742623 chr18 36701474 36701858 + 6.80573297742623 NA Intergenic ORR1B1|LTR|ERVL-MaLR -5741 NM_172831 240216 Mm.252323 NM_172831 ENSMUSG00000044719 E230025N22Rik EG240216 Riken cDNA E230025N22 gene protein-coding common_peak2_118_1171_-0.347684484182604_10.0209146123309_6.80398949731271 chr3 90212470 90214010 + 6.80398949731271 NA promoter-TSS (NM_001293741) promoter-TSS (NM_001293741) 407 NM_001190258 100043813 Mm.270283 NM_001190258 ENSMUSG00000050621 Rps27rt ENSMUSG00000050621|Gm9846|Rps27l2 ribosomal protein S27, retrogene protein-coding common_peak2_188_1327_0.290704244758141_10.520391553726_6.80282905277211 chr5 130221584 130223103 + 6.80282905277211 NA promoter-TSS (NM_027854) promoter-TSS (NM_027854) 8 NM_027854 71667 Mm.258508 NM_027854 ENSMUSG00000053094 Tmem248 0610007L01Rik|A930023A16Rik|AW557951|G430067H08Rik transmembrane protein 248 protein-coding common_peak1_135_1355_-0.321768268603103_10.2442573288348_6.80205408963831 chr4 125175949 125177537 + 6.80205408963831 NA Intergenic Intergenic -48862 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding unique_peak2_9_111_-1.34283300561318_6.13593841925101_6.80203451789706 chr1 95605211 95606161 + 6.80203451789706 NA intron (NM_009183, intron 4 of 4) intron (NM_009183, intron 4 of 4) 61908 NM_009183 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding unique_peak2_9_111_-1.34283300561318_6.13593841925101_6.80203451789706-3 chr11 88109737 88110523 + 6.80203451789706 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) 10984 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding unique_peak2_9_111_-1.34283300561318_6.13593841925101_6.80203451789706-5 chr7 143296700 143297300 + 6.80203451789706 NA promoter-TSS (NR_001461) promoter-TSS (NR_001461) -453 NR_001461 63830 Mm.356096 NR_001461 ENSMUSG00000101609 Kcnq1ot1 Kvlqt1-as|Lit1|Tssc8 KCNQ1 overlapping transcript 1 ncRNA unique_peak2_9_111_-1.34283300561318_6.13593841925101_6.80203451789706-4 chr18 7609047 7609845 + 6.80203451789706 NA intron (NM_001161620, intron 1 of 12) SUBTEL_sa|Satellite|Satellite 17417 NM_001081287 75739 Mm.133293 NM_001081287 ENSMUSG00000057440 Mpp7 1110068J02Rik|2810038M04Rik|5430426E14Rik|AI415104|Gm955 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) protein-coding unique_peak2_9_111_-1.34283300561318_6.13593841925101_6.80203451789706-2 chr10 14013666 14014374 + 6.80203451789706 NA intron (NM_010437, intron 1 of 8) RSINE1|SINE|B4 47641 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_306_2540_0.213010611846782_11.4176859659767_6.8005763144786 chr1 194975684 194978363 + 6.8005763144786 NA promoter-TSS (NR_033564) promoter-TSS (NR_033564) -64 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA common_peak2_95_929_-0.394086815530587_9.6640434982301_6.7995894447028 chr6 47811521 47814425 + 6.7995894447028 NA intron (NM_009787, intron 1 of 9) intron (NM_009787, intron 1 of 9) 539 NM_009787 12304 Mm.2442 NM_009787 ENSMUSG00000025823 Pdia4 AI987846|Cai|ERp-72|Erp72 protein disulfide isomerase associated 4 protein-coding common_peak1_135_845_0.358859341413291_9.90394352382659_6.79850023486935 chr9 79758993 79760432 + 6.79850023486935 NA 5' UTR (NM_009945, exon 1 of 4) 5' UTR (NM_009945, exon 1 of 4) 141 NM_009945 12866 Mm.152627 NM_009945 ENSMUSG00000032330 Cox7a2 COX7AL|Cox7a3|CoxVIIa-L cytochrome c oxidase subunit VIIa 2 protein-coding common_peak2_123_743_0.380748015998988_9.72953281910753_6.79837345467686 chr8 41415929 41417367 + 6.79837345467686 NA intron (NM_013522, intron 1 of 8) intron (NM_013522, intron 1 of 8) 470 NM_013522 14300 Mm.217312 NM_013522 ENSMUSG00000031590 Frg1 - FSHD region gene 1 protein-coding common_peak1_35_114_0.885807622114648_7.2883938620017_6.79822652922682 chr9 121316312 121316999 + 6.79822652922682 NA Intergenic MTD|LTR|ERVL-MaLR -39483 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding common_peak2_334_2850_0.201396963090094_11.577950805483_6.79748944419574 chr11 50290363 50293537 + 6.79748944419574 NA exon (NM_175334, exon 1 of 5) exon (NM_175334, exon 1 of 5) 386 NM_175334 103806 Mm.51116 NM_175334 ENSMUSG00000050567 Maml1 AI644666|AW743257|D930008C07Rik|Mam-1|Mam1|mKIAA0200 mastermind like 1 (Drosophila) protein-coding common_peak1_81_411_0.501555049068564_8.9372780517175_6.79653581030141 chr4 21766453 21767268 + 6.79653581030141 NA intron (NM_029840, intron 1 of 3) intron (NM_029840, intron 1 of 3) 351 NM_029840 77032 Mm.87238 NM_029840 ENSMUSG00000028251 Tstd3 2610029I01Rik thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 protein-coding unique_peak2_8_103_-1.42236666745478_5.9892563844137_6.7960982962215 chr11 16950545 16951194 + 6.7960982962215 NA promoter-TSS (NM_176982) promoter-TSS (NM_176982) 413 NR_110421 72735 Mm.268598 NR_015469 Eldr 2810442I21Rik|4930500E12Rik|Fabl Egfr long non-coding downstream RNA ncRNA unique_peak2_8_103_-1.42236666745478_5.9892563844137_6.7960982962215-2 chr17 30199141 30199908 + 6.7960982962215 NA intron (NM_148926, intron 4 of 4) intron (NM_148926, intron 4 of 4) 57011 NR_105839 102465223 NR_105839 ENSMUSG00000098522 Mir6412 Gm27364|mmu-mir-6412 microRNA 6412 ncRNA unique_peak1_19_39_1.36920613274341_6.00653116125907_6.79609829622148-2 chr18 80532055 80532627 + 6.79609829622148 NA Intergenic Intergenic 12205 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_19_39_1.36920613274341_6.00653116125907_6.79609829622148 chr3 52879565 52879902 + 6.79609829622148 NA Intergenic Intergenic 47933 NR_040555 622124 Mm.389434 NR_040555 ENSMUSG00000104401 Gm20750 - predicted gene, 20750 ncRNA unique_peak1_19_39_1.36920613274341_6.00653116125907_6.79609829622148 chr10 108164920 108165397 + 6.79609829622148 NA intron (NM_027892, intron 1 of 25) intron (NM_027892, intron 1 of 25) 2758 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak2_240_1842_0.248011139623936_10.9718459254427_6.79541607007524 chr9 115308809 115311338 + 6.79541607007524 NA 5' UTR (NM_024222, exon 1 of 16) 5' UTR (NM_024222, exon 1 of 16) 348 NM_024222 68292 Mm.296158 NM_024222 ENSMUSG00000032437 Stt3b 1300006C19Rik|Simp STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) protein-coding unique_peak1_11_12_2.08672343876465_4.74380143752342_6.79315079895028 chr1 36326216 36326626 + 6.79315079895028 NA Intergenic Intergenic 18688 NM_001172205 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding unique_peak1_11_12_2.08672343876465_4.74380143752342_6.79315079895028-2 chr1 144299103 144299411 + 6.79315079895028 NA Intergenic MER67B|LTR|ERV1 -50153 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak1_152_995_0.331803361212659_10.1259036126744_6.79228107556888 chr5 121660028 121661335 + 6.79228107556888 NA promoter-TSS (NM_028037) promoter-TSS (NM_028037) 118 NM_001289543 72399 Mm.153372 NM_028227 ENSMUSG00000029458 Brap 3010002G07Rik|BRAP2|IMP BRCA1 associated protein protein-coding common_peak2_304_3355_-0.199901962514533_11.6125760191826_6.79219924244141 chr11 48869142 48873384 + 6.79219924244141 NA promoter-TSS (NM_008326) promoter-TSS (NM_008326) 83 NM_008326 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47 immunity-related GTPase family M member 1 protein-coding unique_peak1_27_74_1.05774605952204_6.7576917202569_6.79111131772154 chr1 152807907 152808453 + 6.79111131772154 NA exon (NM_010877, exon 2 of 16) exon (NM_010877, exon 2 of 16) 8027 NM_010877 17970 Mm.270307 NM_010877 ENSMUSG00000026480 Ncf2 NOXA2|Ncf-2|p67phox neutrophil cytosolic factor 2 protein-coding common_peak1_27_74_1.05774605952204_6.7576917202569_6.79111131772154 chr2 35336499 35337038 + 6.79111131772154 NA intron (NM_013515, intron 1 of 6) CpG 241 NM_013515 13830 Mm.295284 NM_013515 ENSMUSG00000026880 Stom Epb7.2 stomatin protein-coding common_peak2_62_596_-0.499977961313023_8.97159814060829_6.79095268785091 chr7 98177717 98179088 + 6.79095268785091 NA promoter-TSS (NM_007602) promoter-TSS (NM_007602) -128 NM_007602 12337 Mm.326847 NM_007602 ENSMUSG00000035547 Capn5 nCL-3 calpain 5 protein-coding common_peak2_154_1565_-0.298080705678414_10.4638281444518_6.78943462200718 chr11 11461240 11462939 + 6.78943462200718 NA exon (NM_015785, exon 1 of 8) exon (NM_015785, exon 1 of 8) 330 NM_015785 53604 Mm.9500 NM_015785 ENSMUSG00000020193 Zpbp 4930486K01Rik|Iam38|Sp38 zona pellucida binding protein protein-coding common_peak1_55_232_0.648990916550002_8.18868160292928_6.78936974412937 chr9 65294214 65294960 + 6.78936974412937 NA intron (NM_011802, intron 1 of 13) CpG 327 NM_011802 270166 Mm.30088 NM_011802 ENSMUSG00000015357 Clpx AU014732|E330029I21 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding unique_peak2_28_277_-0.770277758210939_7.73380219361804_6.78852598259071 chr10 59577453 59579134 + 6.78852598259071 NA intron (NM_001033259, intron 1 of 7) intron (NM_001033259, intron 1 of 7) 38399 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak1_28_277_-0.770277758210939_7.73380219361804_6.78852598259071 chr13 95713204 95713840 + 6.78852598259071 NA intron (NM_027711, intron 12 of 35) intron (NM_027711, intron 12 of 35) 16602 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding unique_peak2_28_277_-0.770277758210939_7.73380219361804_6.78852598259071-2 chr18 11855320 11856919 + 6.78852598259071 NA intron (NM_022021, intron 1 of 8) intron (NM_022021, intron 1 of 8) -15681 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA common_peak1_218_2302_-0.242845153253931_11.0478761191659_6.7870650189862 chr11 70432212 70434924 + 6.7870650189862 NA intron (NM_145429, intron 1 of 14) intron (NM_145429, intron 1 of 14) 988 NM_001271358 216869 Mm.203747 NM_145429 ENSMUSG00000060216 Arrb2 AI326910|AW122872 arrestin, beta 2 protein-coding common_peak1_72_695_-0.460624469463101_9.21263126111718_6.78650360828209 chr2 134643338 134644303 + 6.78650360828209 NA intron (NM_029148, intron 1 of 7) CpG 301 NM_029148 52837 Mm.264096 NM_029148 ENSMUSG00000034723 Tmx4 2810417D04Rik|4930500L08Rik|AI843224|AW046784|D2Bwg1356e|Txndc13|mKIAA1162 thioredoxin-related transmembrane protein 4 protein-coding common_peak1_168_1140_0.311730772240729_10.311948462409_6.78526489814554 chr10 7792287 7793593 + 6.78526489814554 NA promoter-TSS (NM_026141) promoter-TSS (NM_026141) 46 NM_026141 67418 Mm.38927 NM_026141 ENSMUSG00000015757 Ppil4 3732410E19Rik|3830425H19Rik|AI788954|AW146233|PPIase peptidylprolyl isomerase (cyclophilin)-like 4 protein-coding common_peak1_120_1192_-0.343811483059779_10.0484725861653_6.78414842094879 chr4 132768065 132769152 + 6.78414842094879 NA intron (NM_011284, intron 1 of 8) CpG 248 NM_011284 19891 Mm.2870 NM_011284 ENSMUSG00000028884 Rpa2 AA409079|AI325195|AU020965|RPA34|Rf-A2 replication protein A2 protein-coding unique_peak1_12_15_1.92880893345458_4.96440446672729_6.78396547427843 chr12 81719663 81719944 + 6.78396547427843 NA 3' UTR (NM_001174107, exon 11 of 11) 3' UTR (NM_001174107, exon 11 of 11) 61367 NM_177395 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding common_peak2_96_939_-0.39117858320159_9.6809276549642_6.78301803159381 chr7 126861092 126863103 + 6.78301803159381 NA promoter-TSS (NM_153580) promoter-TSS (NM_153580) 125 NM_172746 233876 Mm.363427 NM_172746 ENSMUSG00000042606 Hirip3 B130036O03|C86302 HIRA interacting protein 3 protein-coding common_peak2_52_213_0.674274779041966_8.07860437592213_6.78133670285236 chr1 86406335 86407752 + 6.78133670285236 NA Intergenic Intergenic -18902 NM_010341 14767 Mm.389159 NM_010341 ENSMUSG00000026237 Nmur1 FM-3|Gpr66|NMU-R1|NMU1R|NmU-R neuromedin U receptor 1 protein-coding common_peak1_396_3561_0.18067040850636_11.8888070053548_6.78070719035063 chr11 74722741 74725178 + 6.78070719035063 NA promoter-TSS (NR_037610) promoter-TSS (NR_037610) -101 NR_037610 18472 Mm.397111 NM_013625 ENSMUSG00000020745 Pafah1b1 LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 protein-coding unique_peak2_22_224_-0.875320387123527_7.37612099765527_6.77799555253062 chr3 79196275 79197477 + 6.77799555253062 NA Intergenic Lx2|LINE|L1 -16043 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak1_34_109_0.900086000998874_7.2314027140241_6.77756893112224 chr6 83441605 83442275 + 6.77756893112224 NA promoter-TSS (NM_183138) promoter-TSS (NM_183138) 185 NR_028382 320775 Mm.434334 NR_028382 ENSMUSG00000051844 B230319C09Rik - RIKEN cDNA B230319C09 gene ncRNA unique_peak2_34_109_0.900086000998874_7.2314027140241_6.77756893112224 chr3 152113585 152114713 + 6.77756893112224 NA intron (NM_016867, intron 3 of 5) intron (NM_016867, intron 3 of 5) 51751 NM_016867 54120 Mm.97 NM_016867 ENSMUSG00000039131 Gipc2 2200002N01Rik|AU021850|Semcap2 GIPC PDZ domain containing family, member 2 protein-coding common_peak2_172_1177_0.307086707662089_10.3556671776615_6.77656244192412 chr11 88613353 88615577 + 6.77656244192412 NA intron (NM_054043, intron 5 of 13) MIR3|SINE|MIR -4786 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_46_177_0.72739765645962_7.83943225919621_6.77532745337164 chr12 69461639 69462568 + 6.77532745337164 NA Intergenic Intergenic 13447 NR_038060 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak1_31_304_-0.729799858138724_7.88776550338089_6.77484359317981 chr14 73509896 73510714 + 6.77484359317981 NA intron (NM_026119, intron 1 of 6) CpG 256 NM_026119 67381 Mm.282888 NM_026119 ENSMUSG00000022109 Med4 2410046H15Rik|DRIP36|HSPC126|TRAP36|Vdirp|Vdrip mediator complex subunit 4 protein-coding common_peak2_79_397_0.507734229459839_8.89049173527357_6.77473255666943 chr2 25364658 25366117 + 6.77473255666943 NA exon (NM_001033293, exon 1 of 9) exon (NM_001033293, exon 1 of 9) 239 NM_001033293 227620 Mm.33797 NM_001033293 ENSMUSG00000026956 Uap1l1 5730445F03Rik UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 protein-coding common_peak1_214_1581_0.26629887265948_10.7606833208025_6.77257352867696 chr4 103118898 103120431 + 6.77257352867696 NA intron (NM_001039081, intron 1 of 12) CpG 274 NM_001039081 71148 Mm.288721 NM_027696 ENSMUSG00000028522 Mier1 4933425I22Rik|5830411K19Rik|er1 MEIR1 treanscription regulator protein-coding common_peak1_23_232_-0.850410676562185_7.43898080637319_6.77204366571043 chr1 80730998 80731475 + 6.77204366571043 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 27317 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak1_111_644_0.406634022080022_9.53647236135063_6.77187252870695 chr11 102229336 102230152 + 6.77187252870695 NA TTS (NR_106179) TTS (NR_106179) 406 NR_106179 102465892 NR_106179 ENSMUSG00000098863 Mir8101 Gm27705|mmu-mir-8101 microRNA 8101 ncRNA common_peak2_242_2589_-0.228259783427752_11.22460649086_6.77165819737326 chr6 86437592 86439885 + 6.77165819737326 NA promoter-TSS (NM_001243741) promoter-TSS (NM_001243741) 92 NM_001243741 232196 Mm.404040 NM_146170 ENSMUSG00000046679 C87436 - expressed sequence C87436 protein-coding common_peak2_140_1409_-0.314213843706852_10.3043725254327_6.77130820093409 chr1 75123985 75125923 + 6.77130820093409 NA TTS (NM_194333) TTS (NM_194333) 8936 NM_194333 22626 Mm.68157 NM_194333 ENSMUSG00000026205 Slc23a3 SVCT3|Yspl1 solute carrier family 23 (nucleobase transporters), member 3 protein-coding common_peak2_57_245_0.632761120359685_8.25889506551908_6.76838109330874 chr4 59008821 59010600 + 6.76838109330874 NA intron (NM_001033165, intron 1 of 3) intron (NM_001033165, intron 1 of 3) 6517 NM_001033165 72429 Mm.317801 NM_001033165 ENSMUSG00000070972 Dnajc25 2010109C08Rik|2010203O07Rik DnaJ heat shock protein family (Hsp40) member C25 protein-coding common_peak1_227_2409_-0.237094089194438_11.1162703865201_6.76785826423831 chr11 87755442 87757596 + 6.76785826423831 NA promoter-TSS (NR_029555) promoter-TSS (NR_029555) -345 NR_029555 387160 NR_029555 ENSMUSG00000105196 Mir142 Mirn142|miR-142|mir-142a|mmu-mir-142|mmu-mir-142a microRNA 142 ncRNA common_peak1_49_195_0.697917659207532_7.96366867371897_6.76778283966527 chr5 146963198 146963950 + 6.76778283966527 NA intron (NM_001256101, intron 1 of 4) CpG 223 NM_001256101 76366 Mm.486234 NM_029581 ENSMUSG00000016510 Mtif3 2810012L14Rik|AI414549 mitochondrial translational initiation factor 3 protein-coding common_peak2_561_5591_0.145055153011981_12.5216762218814_6.76734466397362 chr17 47501179 47509770 + 6.76734466397362 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 423 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding unique_peak2_17_180_-0.995160525210538_7.00226562447794_6.76729861345361 chr2 148874797 148875667 + 6.76729861345361 NA exon (NM_009976, exon 1 of 3) exon (NM_009976, exon 1 of 3) 280 NM_009976 13010 Mm.4263 NM_009976 ENSMUSG00000027447 Cst3 CysC cystatin C protein-coding common_peak1_17_180_-0.995160525210538_7.00226562447794_6.76729861345361 chr6 29767796 29768193 + 6.76729861345361 NA promoter-TSS (NM_021414) promoter-TSS (NM_021414) -449 NM_021414 74340 Mm.210899 NM_021414 ENSMUSG00000029772 Ahcyl2 4631427C17Rik|AI227036|Adohcyase3|mKIAA0828 S-adenosylhomocysteine hydrolase-like 2 protein-coding common_peak1_93_502_0.455328808806849_9.20207899420895_6.76662700080797 chr12 69986269 69987575 + 6.76662700080797 NA promoter-TSS (NM_022028) promoter-TSS (NM_022028) 80 NM_022028 64010 Mm.390480 NM_022028 ENSMUSG00000021067 Sav1 1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4 salvador family WW domain containing 1 protein-coding unique_peak2_15_163_-1.06129874149292_6.82690263387163_6.76609010887308 chr5 31576825 31577588 + 6.76609010887308 NA Intergenic Intergenic -5809 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA unique_peak2_15_163_-1.06129874149292_6.82690263387163_6.76609010887308-2 chr9 101972135 101972922 + 6.76609010887308 NA intron (NM_001168296, intron 9 of 14) intron (NM_001168296, intron 9 of 14) 332447 NR_106163 102466241 NR_106163 ENSMUSG00000098521 Mir7243 Gm27363|mmu-mir-7243 microRNA 7243 ncRNA common_peak1_28_79_1.02673521962521_6.83529570469997_6.76609010887308-2 chr8 69922556 69923057 + 6.76609010887308 NA intron (NM_001286450, intron 3 of 12) intron (NM_001286450, intron 3 of 12) -20248 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak1_28_79_1.02673521962521_6.83529570469997_6.76609010887308 chr11 116414799 116415422 + 6.76609010887308 NA Intergenic B3|SINE|B2 -2078 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak2_141_1420_-0.312918982209407_10.3162313481381_6.76495442972321 chr6 142558280 142562916 + 6.76495442972321 NA Intergenic Intergenic 10758 NM_008428 16523 Mm.1482 NM_008428 ENSMUSG00000030247 Kcnj8 AI448900|Kir6.1|gnite|slmbr|sltr|uKATP-1 potassium inwardly-rectifying channel, subfamily J, member 8 protein-coding common_peak1_48_461_-0.574872804505373_8.56431263916337_6.76448286855799 chr9 32616186 32616999 + 6.76448286855799 NA Intergenic Intergenic -75140 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak2_48_461_-0.574872804505373_8.56431263916337_6.76448286855799 chrX 71815882 71817492 + 6.76448286855799 NA promoter-TSS (NM_001081356) promoter-TSS (NM_001081356) -71 NM_001081356 67048 Mm.41102 NM_001081356 ENSMUSG00000073131 Vma21 2610030H06Rik|AI840175 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) protein-coding common_peak1_198_2067_-0.257038676467516_10.8855011320812_6.76420360538176 chr12 84175046 84178310 + 6.76420360538176 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 17337 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_73_704_-0.455083484888389_9.23393770484196_6.76336276844024 chr7 118740033 118741406 + 6.76336276844024 NA exon (NM_027815, exon 1 of 31) exon (NM_027815, exon 1 of 31) 448 NM_027815 71517 Mm.213298 NM_027815 ENSMUSG00000030982 9030624J02Rik 2610029J22Rik RIKEN cDNA 9030624J02 gene protein-coding common_peak1_88_856_-0.410133025348312_9.53808488143834_6.76319293354252 chr7 98814850 98816101 + 6.76319293354252 NA Intergenic tRNA-Pro-CCA|tRNA|tRNA -19637 NM_001285794 22411 Mm.22182 NM_009519 ENSMUSG00000015957 Wnt11 - wingless-type MMTV integration site family, member 11 protein-coding common_peak1_179_1243_0.298632489806741_10.430087015034_6.76272168496406 chr4 109117143 109118900 + 6.76272168496406 NA promoter-TSS (NM_001134791) promoter-TSS (NM_001134791) 15 NM_173350 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding common_peak1_33_104_0.915903054494405_7.17219704491333_6.76116687198309 chr8 120781315 120781948 + 6.76116687198309 NA Intergenic Intergenic 42992 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_44_423_-0.601741816998567_8.42704954606392_6.76098234963214 chr19 8880049 8881409 + 6.76098234963214 NA exon (NM_001160356, exon 1 of 2) exon (NM_001160356, exon 1 of 2) 204 NM_001160356 107197 Mm.381181 NM_001160356 ENSMUSG00000071654 Uqcc3 AI462493|Cbp4 ubiquinol-cytochrome c reductase complex assembly factor 3 protein-coding common_peak2_149_968_0.336409164060944_10.0885574374456_6.76020408984319 chr8 13623019 13626024 + 6.76020408984319 NA intron (NM_009025, intron 2 of 23) intron (NM_009025, intron 2 of 23) 53066 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_223_2361_-0.239391565820164_11.0860974664871_6.76006659530727 chr14 55590318 55592329 + 6.76006659530727 NA promoter-TSS (NM_001029855) promoter-TSS (NM_001029855) -222 NM_001029855 19188 Mm.371573 NM_011190 ENSMUSG00000079197 Psme2 AA589371|AI788882|PA28b proteasome (prosome, macropain) activator subunit 2 (PA28 beta) protein-coding common_peak1_112_652_0.404580316625969_9.55322933985942_6.75982017644606 chr5 135688245 135689754 + 6.75982017644606 NA promoter-TSS (NM_008898) promoter-TSS (NM_008898) -146 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak2_109_1074_-0.362217614904552_9.88901213702455_6.75763639416454 chr14 106162726 106165283 + 6.75763639416454 NA Intergenic Intergenic 57806 NR_073203 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_105_1032_-0.370270462235592_9.82748930774726_6.75691791639751 chr15 94543081 94544435 + 6.75691791639751 NA promoter-TSS (NM_029926) promoter-TSS (NM_029926) 98 NM_029926 266632 Mm.422858 NM_029926 ENSMUSG00000059883 Irak4 8430405M07Rik|9330209D03Rik|IRAK-4|NY-REN-64 interleukin-1 receptor-associated kinase 4 protein-coding common_peak2_327_2773_0.203528126300892_11.539516135474_6.75643294338702 chr15 83148072 83150593 + 6.75643294338702 NA promoter-TSS (NR_004432) promoter-TSS (NR_004432) 4 NM_178627 73826 Mm.23758 NM_178627 ENSMUSG00000041815 Poldip3 1110008P04Rik|AA408269|AL022852|C77954|PDIP46|SKAR|mKIAA1649 polymerase (DNA-directed), delta interacting protein 3 protein-coding common_peak2_200_1444_0.277824438914964_10.6357659968455_6.75643060518408 chr7 28440012 28443275 + 6.75643060518408 NA intron (NM_022024, intron 2 of 6) intron (NM_022024, intron 2 of 6) 706 NM_001039192 63986 Mm.194536 NM_022024 ENSMUSG00000060791 Gmfg 0610039G16Rik|2310057N07Rik|AI324845 glia maturation factor, gamma protein-coding common_peak1_69_664_-0.469152504678663_9.14263427804922_6.75537169708942 chr5 135187236 135188227 + 6.75537169708942 NA exon (NM_011714, exon 1 of 19) exon (NM_011714, exon 1 of 19) 408 NM_011714 22385 Mm.40331 NM_011714 ENSMUSG00000002748 Baz1b C87820|WSTF|Wbscr9 bromodomain adjacent to zinc finger domain, 1B protein-coding common_peak2_332_2829_0.201466345798734_11.5673195106186_6.75412757866326 chr15 86075665 86082896 + 6.75412757866326 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 20553 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak2_198_1425_0.279223527403529_10.6173700301457_6.75374773446819 chr7 80401195 80403914 + 6.75374773446819 NA 5' UTR (NM_011046, exon 1 of 16) 5' UTR (NM_011046, exon 1 of 16) 258 NM_011046 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak2_78_754_-0.438233743099126_9.34121596266288_6.75356400301976 chr17 35993754 35995346 + 6.75356400301976 NA promoter-TSS (NR_015618) promoter-TSS (NR_015618) 46 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA common_peak2_122_735_0.382015825161698_9.71456986863786_6.75177139899677 chr11 96666005 96667703 + 6.75177139899677 NA intron (NM_001033186, intron 4 of 12) B3|SINE|B2 110701 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding common_peak2_29_84_0.999265496460001_6.9090236843677_6.75066153635559-2 chr14 121407011 121407789 + 6.75066153635559 NA Intergenic Intergenic -28170 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_29_84_0.999265496460001_6.9090236843677_6.75066153635559 chr13 100317173 100317778 + 6.75066153635559 NA promoter-TSS (NM_010871) promoter-TSS (NM_010871) 213 NM_021545 53880 Mm.218759 NM_021545 Naip7 Birc1g|Naip-rs4B|Naip6 NLR family, apoptosis inhibitory protein 7 protein-coding unique_peak2_10_120_-1.285677805767_6.2760243343911_6.75006236675005-2 chr10 82083105 82083870 + 6.75006236675005 NA Intergenic CpG 35360 NM_001024626 408062 Mm.391409 NM_001024626 ENSMUSG00000061371 Zfp873 - zinc finger protein 873 protein-coding unique_peak2_10_120_-1.285677805767_6.2760243343911_6.75006236675005 chr1 40525754 40526813 + 6.75006236675005 NA intron (NM_010553, intron 6 of 12) ORR1A4|LTR|ERVL-MaLR 10921 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding unique_peak2_10_120_-1.285677805767_6.2760243343911_6.75006236675005-3 chr12 84995544 84996154 + 6.75006236675005 NA promoter-TSS (NM_178363) promoter-TSS (NM_178363) -472 NM_178363 56531 Mm.153183 NM_178363 ENSMUSG00000021244 Ylpm1 A930013E17Rik|ZAP|Zap3 YLP motif containing 1 protein-coding common_peak2_223_1671_0.25904255149611_10.8368804078289_6.74963267947843 chr5 140417942 140420200 + 6.74963267947843 NA promoter-TSS (NM_133916) promoter-TSS (NM_133916) -234 NM_133916 27979 Mm.21671 NM_133916 ENSMUSG00000056076 Eif3b AL033316|AL033334|AL033369|AW208965|D5Wsu45e|EIF3-ETA|EIF3-P110|EIF3-P116|Eif3s9|PRT1 eukaryotic translation initiation factor 3, subunit B protein-coding common_peak1_32_99_0.933463757886155_7.1105880687178_6.74956675699475 chr12 26455921 26456632 + 6.74956675699475 NA exon (NM_021384, exon 1 of 6) exon (NM_021384, exon 1 of 6) 176 NM_021384 58185 Mm.24045 NM_021384 ENSMUSG00000020641 Rsad2 2510004L01Rik|Vig1|cig5 radical S-adenosyl methionine domain containing 2 protein-coding common_peak2_124_1234_-0.336174547457336_10.1022080527434_6.74899618959242 chr4 59236155 59240188 + 6.74899618959242 NA Intergenic CT-rich|Low_complexity|Low_complexity -21880 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_54_226_0.654742531095001_8.15391975283842_6.74781044262545 chr13 51762699 51763871 + 6.74781044262545 NA 5' UTR (NM_013660, exon 2 of 16) 5' UTR (NM_013660, exon 2 of 16) 30462 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_54_226_0.654742531095001_8.15391975283842_6.74781044262545-2 chr4 127076766 127077969 + 6.74781044262545 NA promoter-TSS (NM_001285888) promoter-TSS (NM_001285888) -16 NM_001285885 100177 Mm.276096 NM_177462 ENSMUSG00000042408 Zmym6 9330177P20Rik|AI593204|AI661340|D4Wsu24e|Zfp258 zinc finger, MYM-type 6 protein-coding common_peak1_320_2696_0.205965129273453_11.5001223708723_6.74671327947465 chr10 96617051 96620182 + 6.74671327947465 NA exon (NM_007569, exon 2 of 2) exon (NM_007569, exon 2 of 2) 1615 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_294_3228_-0.203239733693835_11.5552518587671_6.74655227816545 chr13 23583086 23587071 + 6.74655227816545 NA TTS (NM_001290530) TTS (NM_001290530) 892 NM_001290530 319179 Mm.440391 NM_178194 ENSMUSG00000047246 Hist1h2be - histone cluster 1, H2be protein-coding common_peak1_434_4013_0.170078516181556_12.0558641594534_6.74634579210293 chr3 137862629 137866700 + 6.74634579210293 NA 5' UTR (NM_016750, exon 1 of 5) 5' UTR (NM_016750, exon 1 of 5) 177 NM_016750 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak1_47_451_-0.579791183136736_8.53028337084682_6.74571681153385 chr5 124439784 124440633 + 6.74571681153385 NA intron (NM_001310725, intron 1 of 6) CpG 278 NM_001310725 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding common_peak1_38_367_-0.650618506449152_8.19825270283244_6.74545593056057 chr13 49341538 49342066 + 6.74545593056057 NA exon (NM_029791, exon 1 of 8) exon (NM_029791, exon 1 of 8) 253 NM_001039180 76895 Mm.197387 NM_029791 ENSMUSG00000037933 Bicd2 - bicaudal D homolog 2 (Drosophila) protein-coding common_peak1_38_367_-0.650618506449152_8.19825270283244_6.74545593056057-2 chr4 32258537 32259212 + 6.74545593056057 NA Intergenic Intergenic -158561 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_38_367_-0.650618506449152_8.19825270283244_6.74545593056057 chr11 119267239 119268603 + 6.74545593056057 NA promoter-TSS (NM_001159324) promoter-TSS (NM_001159324) -46 NM_001159324 14387 Mm.4793 NM_008064 ENSMUSG00000025579 Gaa E430018M07Rik glucosidase, alpha, acid protein-coding common_peak1_30_89_0.974829108404632_6.97926765053199_6.74347223585616 chr5 113113965 113114725 + 6.74347223585616 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) -32761 NM_021352 12962 Mm.378899 NM_021352 ENSMUSG00000029352 Crybb3 AI852419 crystallin, beta B3 protein-coding common_peak2_40_142_0.801571928287037_7.56065730092191_6.74122848772899 chr6 54846592 54847923 + 6.74122848772899 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 30341 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding unique_peak2_40_142_0.801571928287037_7.56065730092191_6.74122848772899 chr7 80114673 80115859 + 6.74122848772899 NA promoter-TSS (NM_173011) promoter-TSS (NM_173011) 84 NM_173011 269951 Mm.246432 NM_173011 ENSMUSG00000030541 Idh2 E430004F23|IDPm|Idh-2 isocitrate dehydrogenase 2 (NADP+), mitochondrial protein-coding common_peak1_110_1085_-0.360890220439666_9.90436327758453_6.74097401604931 chrX 103980153 103981457 + 6.74097401604931 NA intron (NM_011276, intron 1 of 4) CpG 479 NM_011276 19820 Mm.427762 NM_011276 ENSMUSG00000056537 Rlim AL022832|AW743871|Ha1r|Rlim1|Rnf12 ring finger protein, LIM domain interacting protein-coding common_peak1_76_734_-0.444878898950661_9.2991609902484_6.74093148322638 chr5 107900509 107901668 + 6.74093148322638 NA intron (NM_016980, intron 1 of 7) intron (NM_016980, intron 1 of 7) 560 NM_016980 100503670 Mm.277897 NM_016980 ENSMUSG00000058558 Rpl5 U21RNA ribosomal protein L5 protein-coding common_peak1_91_487_0.460948088903336_9.16121138201455_6.74084829210795 chr10 80292352 80293221 + 6.74084829210795 NA exon (NM_009091, exon 2 of 4) exon (NM_009091, exon 2 of 4) 277 NM_001310726 20054 Mm.643 NM_009091 ENSMUSG00000063457 Rps15 rig ribosomal protein S15 protein-coding common_peak1_22_52_1.21054034953031_6.33319062932835_6.7401232928146 chr14 25467329 25467750 + 6.7401232928146 NA intron (NM_001310666, intron 1 of 23) B4|SINE|B4 8354 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak1_22_52_1.21054034953031_6.33319062932835_6.7401232928146-2 chr8 46772695 46773307 + 6.7401232928146 NA intron (NM_008391, intron 1 of 8) intron (NM_008391, intron 1 of 8) 33256 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding unique_peak1_22_52_1.21054034953031_6.33319062932835_6.7401232928146 chr7 81003922 81004413 + 6.7401232928146 NA intron (NM_178707, intron 1 of 9) intron (NM_178707, intron 1 of 9) 10483 NM_178707 233410 Mm.29525 NM_178707 ENSMUSG00000005621 Zfp592 8430405N24|A730014M16Rik|Znf592|mKIAA0211 zinc finger protein 592 protein-coding common_peak2_109_628_0.410987122692983_9.50240976822578_6.73991153215514 chr4 109279651 109281234 + 6.73991153215514 NA exon (NM_007943, exon 1 of 25) exon (NM_007943, exon 1 of 25) 167 NM_007943 13858 Mm.318250 NM_007943 ENSMUSG00000028552 Eps15 2410112D09Rik epidermal growth factor receptor pathway substrate 15 protein-coding common_peak1_109_628_0.410987122692983_9.50240976822578_6.73991153215514-2 chr16 31200100 31201314 + 6.73991153215514 NA intron (NM_030138, intron 1 of 22) CpG 531 NM_030138 78618 Mm.274646 NM_030138 ENSMUSG00000049076 Acap2 4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding common_peak1_109_628_0.410987122692983_9.50240976822578_6.73991153215514 chr15 27702086 27703699 + 6.73991153215514 NA Intergenic Intergenic -21350 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak2_113_661_0.400423623929314_9.57089921877187_6.73986716908116 chr5 124496108 124498686 + 6.73986716908116 NA intron (NM_021430, intron 6 of 6) intron (NM_021430, intron 6 of 6) 14242 NM_029532 76167 Mm.156035 NM_029532 ENSMUSG00000029402 Snrnp35 6330548G22Rik small nuclear ribonucleoprotein 35 (U11/U12) protein-coding common_peak2_530_5198_0.149776997467066_12.4189069386149_6.73755581624686 chr8 22805100 22809859 + 6.73755581624686 NA Intergenic Intergenic -1825 NM_001122820 64933 Mm.390023 NM_029505 ENSMUSG00000031539 Ap3m2 5830445E16Rik|AP-3B adaptor-related protein complex 3, mu 2 subunit protein-coding common_peak2_143_916_0.343744371836681_10.0126501095134_6.73720721929501 chr4 46195486 46196972 + 6.73720721929501 NA promoter-TSS (NM_011728) promoter-TSS (NM_011728) 82 NM_011728 22590 Mm.247036 NM_011728 ENSMUSG00000028329 Xpa AI573865|Xpac xeroderma pigmentosum, complementation group A protein-coding common_peak1_280_2261_0.224208273211241_11.2554873505954_6.73650029482913 chr8 69900937 69903552 + 6.73650029482913 NA promoter-TSS (NM_032004) promoter-TSS (NM_032004) 29 NM_032004 83984 Mm.432504 NM_032004 ENSMUSG00000047654 Tssk6 Sstk|TSK-6|TSSK-6 testis-specific serine kinase 6 protein-coding common_peak2_48_189_0.707020628579737_7.92336592262082_6.73623164328671 chr19 53450123 53451542 + 6.73623164328671 NA non-coding (NR_028427, exon 5 of 10) non-coding (NR_028427, exon 5 of 10) 13964 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak2_48_189_0.707020628579737_7.92336592262082_6.73623164328671-2 chr8 85428870 85430268 + 6.73623164328671 NA intron (NM_025722, intron 1 of 3) Tigger7|DNA|TcMar-Tigger 3272 NR_033144 66714 Mm.272748 NM_025722 ENSMUSG00000036934 4921524J17Rik - RIKEN cDNA 4921524J17 gene protein-coding common_peak1_20_206_-0.916012313700827_7.23548080064891_6.73523328151681-2 chr9 70678453 70678845 + 6.73523328151681 NA promoter-TSS (NM_007399) promoter-TSS (NM_007399) -352 NM_007399 11487 Mm.3037 NM_007399 ENSMUSG00000054693 Adam10 1700031C13Rik|MADM|kuz|kuzbanian a disintegrin and metallopeptidase domain 10 protein-coding common_peak1_20_206_-0.916012313700827_7.23548080064891_6.73523328151681 chr18 80200797 80201191 + 6.73523328151681 NA promoter-TSS (NM_199197) promoter-TSS (NM_199197) -375 NM_199197 68731 Mm.186936 NM_199197 ENSMUSG00000024570 Rbfa 1110032A13Rik|AI595940 ribosome binding factor A protein-coding common_peak2_211_1552_0.268124273428523_10.7349042511016_6.72724623247899 chr1 106795561 106797461 + 6.72724623247899 NA 5' UTR (NM_009190, exon 1 of 11) 5' UTR (NM_009190, exon 1 of 11) 214 NM_009190 20479 Mm.18705 NM_009190 ENSMUSG00000009907 Vps4b 8030489C12Rik|Skd1 vacuolar protein sorting 4B protein-coding common_peak2_62_595_-0.49755936051038_8.97038884020697_6.72257537781519 chr8 77460461 77462792 + 6.72257537781519 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -55430 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_137_864_0.352651308909063_9.93288197697862_6.72246709719916 chr12 102650852 102653322 + 6.72246709719916 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 32933 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA unique_peak2_18_188_-0.961878220824183_7.08130331380898_6.72232754287074 chr5 141041425 141042601 + 6.72232754287074 NA Intergenic ORR1D2|LTR|ERVL-MaLR -41417 NM_175362 108723 Mm.46187 NM_175362 ENSMUSG00000036526 Card11 0610008L17Rik|2410011D02Rik|BIMP3|CARMA1 caspase recruitment domain family, member 11 protein-coding common_peak1_42_404_-0.616050927518037_8.35375263401297_6.71989836385915 chr11 100622849 100623520 + 6.71989836385915 NA intron (NM_028024, intron 1 of 3) intron (NM_028024, intron 1 of 3) 229 NM_028024 71966 Mm.274734 NM_028024 ENSMUSG00000017837 Nkiras2 2410003M04Rik|4930527H08Rik|D630018G21Rik|KBRAS2 NFKB inhibitor interacting Ras-like protein 2 protein-coding common_peak1_65_299_0.575113568351355_8.51637547467156_6.71938961536337 chr4 107313698 107314873 + 6.71938961536337 NA promoter-TSS (NM_001205156) promoter-TSS (NM_001205156) -78 NM_145550 230584 Mm.29118 NM_145550 ENSMUSG00000057375 Yipf1 C030002N13Rik Yip1 domain family, member 1 protein-coding common_peak2_284_2305_0.221427508776724_11.2818905520401_6.71898968915369 chr1 10037248 10040460 + 6.71898968915369 NA promoter-TSS (NM_013715) promoter-TSS (NM_013715) 636 NM_026493 211660 Mm.244046 NM_026493 ENSMUSG00000056763 Cspp1 2310020J12Rik|4930413O22Rik|AA387550|BC055915|Cspp2|Cspp3 centrosome and spindle pole associated protein 1 protein-coding common_peak1_26_258_-0.79460072084696_7.61950792726307_6.7179518081821-2 chr8 69189300 69189756 + 6.7179518081821 NA Intergenic Intergenic -19518 NM_001013379 234358 Mm.334577 NM_001013379 ENSMUSG00000059897 Zfp930 - zinc finger protein 930 protein-coding common_peak1_26_258_-0.79460072084696_7.61950792726307_6.7179518081821 chr5 105717903 105718357 + 6.7179518081821 NA intron (NM_178701, intron 1 of 2) intron (NM_178701, intron 1 of 2) 17320 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_92_495_0.456620410500715_9.18250651563723_6.7160512148486 chr4 62663503 62665277 + 6.7160512148486 NA intron (NM_134257, intron 10 of 15) (CAAA)n|Simple_repeat|Simple_repeat -9584 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_202_1464_0.275514474468428_10.6544421865438_6.71593253582382 chr2 166646435 166649076 + 6.71593253582382 NA intron (NM_177782, intron 1 of 39) (TTCC)n|Simple_repeat|Simple_repeat -24963 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA unique_peak2_6_86_-1.60960336820351_5.63814181174697_6.71563660237301 chr6 130335308 130336125 + 6.71563660237301 NA exon (NM_010648, exon 2 of 7) exon (NM_010648, exon 2 of 7) 1910 NM_001289605 16634 Mm.425338 NM_010648 ENSMUSG00000067591 Klra3 5E6|Ly49c|NK-2.1|Nk-2|Nk2|Nk2.1 killer cell lectin-like receptor, subfamily A, member 3 protein-coding common_peak1_35_339_-0.678093263078679_8.07034430459836_6.71492684692412-2 chr15 10981741 10982452 + 6.71492684692412 NA intron (NM_008537, intron 1 of 4) intron (NM_008537, intron 1 of 4) 340 NM_008537 17117 Mm.2787 NM_008537 ENSMUSG00000022244 Amacr Macr1 alpha-methylacyl-CoA racemase protein-coding common_peak2_35_339_-0.678093263078679_8.07034430459836_6.71492684692412 chr2 150909231 150910330 + 6.71492684692412 NA exon (NM_001163476, exon 1 of 5) exon (NM_001163476, exon 1 of 5) 186 NM_001163476 69270 Mm.271603 NM_027014 ENSMUSG00000027454 Gins1 2810418N01Rik|Gins4|PSF1|mKIAA0186 GINS complex subunit 1 (Psf1 homolog) protein-coding common_peak1_35_339_-0.678093263078679_8.07034430459836_6.71492684692412 chr11 118289677 118290232 + 6.71492684692412 NA intron (NM_001033528, intron 1 of 20) CpG 290 NM_001033528 72344 Mm.232293 NM_001033528 ENSMUSG00000033909 Usp36 2700002L06Rik|mKIAA1453 ubiquitin specific peptidase 36 protein-coding common_peak2_245_2624_-0.22591161503578_11.245145899923_6.71360367275801 chr11 20111157 20114122 + 6.71360367275801 NA intron (NM_146243, intron 1 of 8) CpG 312 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding common_peak2_201_1455_0.275665864593115_10.6456275724953_6.71216195209378 chr1 87755133 87757138 + 6.71216195209378 NA 5' UTR (NM_001205392, exon 1 of 17) 5' UTR (NM_001205392, exon 1 of 17) 124 NM_001205392 77040 Mm.272972 NM_029846 ENSMUSG00000026289 Atg16l1 1500009K01Rik|Apg16l|Atg16l|WDR30 autophagy related 16-like 1 (S. cerevisiae) protein-coding common_peak2_101_989_-0.37700162665316_9.76278390164039_6.70933116156713 chr8 110996822 110998808 + 6.70933116156713 NA promoter-TSS (NM_007916) promoter-TSS (NM_007916) 8 NM_007916 13680 Mm.287901 NM_007916 ENSMUSG00000015023 Ddx19a DBP5|Ddx19|Eif4a-rs1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a protein-coding common_peak2_143_1441_-0.309333153809087_10.3391888723363_6.70910364804737 chr17 25791473 25793669 + 6.70910364804737 NA promoter-TSS (NM_001285984) promoter-TSS (NM_001285984) -177 NM_145410 214917 Mm.26783 NM_145410 ENSMUSG00000057411 Fam173a - family with sequence similarity 173, member A protein-coding common_peak2_213_2241_-0.244987832263297_11.0080766466738_6.70806440911583 chr1 164061154 164066114 + 6.70806440911583 NA intron (NM_011346, intron 2 of 8) intron (NM_011346, intron 2 of 8) 1558 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak1_25_250_-0.81612230930984_7.56348239929585_6.70760151957904 chr11 118225015 118225640 + 6.70760151957904 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -12585 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_36_349_-0.671427460620919_8.11549738152187_6.7072817393128 chr5 72736678 72737473 + 6.7072817393128 NA promoter-TSS (NM_013698) promoter-TSS (NM_013698) -473 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_17_32_1.46029124251421_5.77453974061556_6.70695676274424-2 chr12 73601359 73601749 + 6.70695676274424 NA intron (NM_001313977, intron 2 of 14) B1F1|SINE|Alu 16758 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding unique_peak1_17_32_1.46029124251421_5.77453974061556_6.70695676274424 chr8 72357721 72358171 + 6.70695676274424 NA intron (NM_007944, intron 22 of 23) intron (NM_007944, intron 22 of 23) 38884 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding unique_peak1_17_32_1.46029124251421_5.77453974061556_6.70695676274424-2 chr9 102576964 102577344 + 6.70695676274424 NA Intergenic MTD|LTR|ERVL-MaLR 48970 NM_001301689 28135 Mm.38910 NM_001081122 ENSMUSG00000032534 Cep63 4921501M07|AL450317.13gm1|AW107703|CD20R|D9Mgc41|D9Mgc48e|ET2 centrosomal protein 63 protein-coding common_peak1_17_32_1.46029124251421_5.77453974061556_6.70695676274424 chr10 18922521 18923031 + 6.70695676274424 NA Intergenic B4A|SINE|B4 77705 NM_022032 64058 Mm.28209 NM_022032 ENSMUSG00000019851 Perp 1110017A08Rik|KCP1|KRTCAP1|PIGPC1|THW PERP, TP53 apoptosis effector protein-coding unique_peak1_17_32_1.46029124251421_5.77453974061556_6.70695676274424-3 chrX 18177077 18177467 + 6.70695676274424 NA intron (NM_001310444, intron 2 of 28) intron (NM_001310444, intron 2 of 28) 14697 NM_001310444 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak2_123_1223_-0.337481015585633_10.0886473348998_6.70659222004941 chr15 81513218 81515605 + 6.70659222004941 NA Intergenic Intergenic 48095 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak1_47_183_0.716825823221439_7.88197486766773_6.70648086432503 chr5 36668408 36669425 + 6.70648086432503 NA intron (NM_001081232, intron 2 of 8) RLTR26_Mus|LTR|ERVK 27105 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak2_47_183_0.716825823221439_7.88197486766773_6.70648086432503 chr3 90358133 90359787 + 6.70648086432503 NA TTS (NM_139304) TTS (NM_139304) 17306 NM_139304 229542 Mm.270999 NM_139304 ENSMUSG00000042390 Gatad2b AL118180|C430014D17Rik|P66beta|mKIAA1150 GATA zinc finger domain containing 2B protein-coding common_peak2_376_3331_0.185495544221853_11.7949204574765_6.70287531005301 chr12 25358842 25365695 + 6.70287531005301 NA Intergenic Intergenic 233094 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_34_330_-0.689241692283684_8.02606656066538_6.70194597066914 chr11 120466689 120467447 + 6.70194597066914 NA promoter-TSS (NM_008244) promoter-TSS (NM_008244) 532 NM_197995 70317 Mm.485046 NM_197995 ENSMUSG00000057594 Arl16 2600005N12Rik ADP-ribosylation factor-like 16 protein-coding common_peak1_34_330_-0.689241692283684_8.02606656066538_6.70194597066914-2 chr8 94362828 94363419 + 6.70194597066914 NA intron (NM_001205311, intron 24 of 24) intron (NM_001205311, intron 24 of 24) -23377 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak2_424_3895_0.17196947264847_12.0137626984066_6.70170553390049 chr12 52602262 52605717 + 6.70170553390049 NA Intergenic Intergenic -1667 NR_045910 73278 Mm.396209 NR_045910 ENSMUSG00000100315 1700031P21Rik - RIKEN cDNA 1700031P21 gene ncRNA common_peak1_27_267_-0.779524440439847_7.67632697023785_6.70068688952274 chr1 169531608 169532032 + 6.70068688952274 NA promoter-TSS (NM_023284) promoter-TSS (NM_023284) -356 NM_023284 66977 Mm.151315 NM_023284 ENSMUSG00000026683 Nuf2 2410003C07Rik|AU044112|C85691|Cdca1|NUF2R NUF2, NDC80 kinetochore complex component protein-coding common_peak2_207_2170_-0.248885832415144_10.9597010944076_6.70048053335403 chr13 41379875 41384111 + 6.70048053335403 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -22992 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak2_174_1788_-0.275386370650054_10.6672444867269_6.70008003892239 chr4 102505146 102508274 + 6.70008003892239 NA intron (NM_019840, intron 5 of 14) intron (NM_019840, intron 5 of 14) -63350 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak1_96_526_0.443679211726195_9.26349875750031_6.69943774310732-2 chr8 20296580 20297550 + 6.69943774310732 NA intron (NR_030708, intron 1 of 4) CpG 367 NR_030708 547150 Mm.359054 NR_030708 ENSMUSG00000071796 6820431F20Rik - cadherin 11 pseudogene pseudo common_peak1_96_526_0.443679211726195_9.26349875750031_6.69943774310732 chr13 113605787 113607157 + 6.69943774310732 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 12092 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak2_38_131_0.828549330249407_7.45866878448316_6.69913325128239 chr19 36918598 36919537 + 6.69913325128239 NA exon (NM_028263, exon 2 of 2) exon (NM_028263, exon 2 of 2) 532 NM_028263 72514 Mm.41674 NM_028263 ENSMUSG00000047632 Fgfbp3 2610306H15Rik|Fgf-bp3 fibroblast growth factor binding protein 3 protein-coding common_peak1_80_774_-0.431710417168722_9.38219729157724_6.69888830407202 chr8 71469119 71469900 + 6.69888830407202 NA intron (NM_001294259, intron 1 of 3) CpG 315 NR_122114 66498 Mm.260360 NM_025600 ENSMUSG00000074247 Dda1 1500034J01Rik|1700095J19Rik|R74921 DET1 and DDB1 associated 1 protein-coding common_peak2_98_958_-0.383932541203967_9.71342073441615_6.69793450048499 chr8 70233678 70235241 + 6.69793450048499 NA promoter-TSS (NM_133972) promoter-TSS (NM_133972) -37 NM_133972 76813 Mm.383251 NM_133972 ENSMUSG00000002343 Armc6 2410153K17Rik|AW554412 armadillo repeat containing 6 protein-coding unique_peak1_15_25_1.59581354498408_5.49834649063313_6.6977226863907-4 chr7 101113713 101114108 + 6.6977226863907 NA intron (NM_199012, intron 2 of 20) intron (NM_199012, intron 2 of 20) 5135 NM_199012 207278 Mm.263041 NM_199012 ENSMUSG00000030691 Fchsd2 BC034086|R74866|Sh3md3|mKIAA0769 FCH and double SH3 domains 2 protein-coding unique_peak1_15_25_1.59581354498408_5.49834649063313_6.6977226863907 chr10 80686570 80686954 + 6.6977226863907 NA 3' UTR (NM_172457, exon 4 of 4) 3' UTR (NM_172457, exon 4 of 4) -10469 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding unique_peak1_15_25_1.59581354498408_5.49834649063313_6.6977226863907-2 chr13 91508796 91509203 + 6.6977226863907 NA intron (NM_024186, intron 1 of 15) RLTR11B|LTR|ERVK 47902 NM_024186 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding common_peak1_15_25_1.59581354498408_5.49834649063313_6.6977226863907 chr1 21329178 21329533 + 6.6977226863907 NA Intergenic ORR1A2|LTR|ERVL-MaLR -20322 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding unique_peak1_15_25_1.59581354498408_5.49834649063313_6.6977226863907-3 chr2 135798018 135798409 + 6.6977226863907 NA intron (NM_013829, intron 1 of 36) intron (NM_013829, intron 1 of 36) 56383 NM_013829 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak1_137_1375_-0.317057123268947_10.2677361930676_6.69677798530569 chr9 32930901 32932642 + 6.69677798530569 NA Intergenic Intergenic -2805 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak2_137_1375_-0.317057123268947_10.2677361930676_6.69677798530569 chr11 106084366 106085662 + 6.69677798530569 NA intron (NM_011947, intron 1 of 15) CpG 112 NM_011947 26406 Mm.27041 NM_011947 ENSMUSG00000020700 Map3k3 AW548911|MAPKKK3|Mekk3|mKIAA4031 mitogen-activated protein kinase kinase kinase 3 protein-coding common_peak2_141_899_0.345990665816336_9.9867765241252_6.69637295407381 chr1 43091733 43093459 + 6.69637295407381 NA intron (NM_001013025, intron 2 of 12) CpG 6026 NM_001013025 73122 Mm.246069 NM_001013025 ENSMUSG00000070939 Tgfbrap1 3110018K12Rik|AU024090|AU042859|AW742551|Trap1 transforming growth factor, beta receptor associated protein 1 protein-coding common_peak1_158_1607_-0.291175409582531_10.5054639863877_6.6937932731311 chr7 104286851 104289144 + 6.6937932731311 NA intron (NM_001310602, intron 1 of 7) intron (NM_001310602, intron 1 of 7) 109 NM_001310602 667823 Mm.482375 NM_001310602 ENSMUSG00000060441 Trim5 EG667823|Gm8833 tripartite motif-containing 5 protein-coding common_peak2_33_321_-0.700768305954091_7.98053272513757_6.69156209566775 chr8 111875874 111876933 + 6.69156209566775 NA intron (NM_025781, intron 1 of 2) intron (NM_025781, intron 1 of 2) 272 NM_025781 66817 Mm.345350 NM_025781 ENSMUSG00000031953 Tmem170 9030409E16Rik|AA403674|D8Bwg1414e|Tmem170a transmembrane protein 170 protein-coding common_peak1_180_1857_-0.270327470906292_10.7243710509295_6.69150010850241 chr2 164083141 164085730 + 6.69150010850241 NA intron (NM_021420, intron 3 of 10) intron (NM_021420, intron 3 of 10) 10257 NM_021420 58231 Mm.234472 NM_021420 ENSMUSG00000018209 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 protein-coding common_peak2_757_8215_0.119423204756167_13.0639320686963_6.68931767073311 chr11 95349482 95359927 + 6.68931767073311 NA intron (NM_172543, intron 1 of 7) intron (NM_172543, intron 1 of 7) 17686 NM_172543 215512 Mm.262113 NM_172543 ENSMUSG00000038893 Fam117a 5730593F17Rik|AW548096 family with sequence similarity 117, member A protein-coding common_peak1_28_276_-0.765078851536621_7.73120274028088_6.68875987370557 chr16 10542552 10543079 + 6.68875987370557 NA 5' UTR (NM_021428, exon 1 of 2) 5' UTR (NM_021428, exon 1 of 2) 239 NM_021428 58239 Mm.353006 NM_021428 ENSMUSG00000038055 Dexi 1810029J14Rik|AI836170|AW413143|D16Bwg0586e|Myle dexamethasone-induced transcript protein-coding common_peak1_139_1396_-0.313445968513218_10.2913933211529_6.68863405419557 chr4 155891665 155892666 + 6.68863405419557 NA promoter-TSS (NM_001033490) promoter-TSS (NM_001033490) 290 NM_207223 140500 Mm.219591 NM_207223 ENSMUSG00000029033 Acap3 Centb5|Kiaa1716-hp|mKIAA1716 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 protein-coding common_peak2_58_253_0.61684171826966_8.29710554590699_6.68835021514568 chr2 19388272 19389631 + 6.68835021514568 NA intron (NM_029619, intron 3 of 4) intron (NM_029619, intron 3 of 4) 17315 NM_029619 76467 Mm.27166 NM_029619 ENSMUSG00000023094 Msrb2 2310050L06Rik|Mrsb|Msrb|Pilb methionine sulfoxide reductase B2 protein-coding unique_peak2_19_196_-0.9309175918256_7.15659302354358_6.68773752069182 chr9 86464263 86465192 + 6.68773752069182 NA intron (NM_027394, intron 1 of 9) CpG 189 NM_027394 70348 Mm.53469 NM_027394 ENSMUSG00000032415 Ube2cbp 2610018I03Rik|Ube3d ubiquitin-conjugating enzyme E2C binding protein protein-coding common_peak1_451_4221_0.165033257197956_12.1262274919461_6.68603501281125 chr14 61680187 61683864 + 6.68603501281125 NA intron (NR_028264, intron 1 of 6) CpG 348 NR_028264 668253 Mm.32886 NR_028264 ENSMUSG00000097589 Dleu2 1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2 deleted in lymphocytic leukemia, 2 ncRNA common_peak1_32_312_-0.712698899271738_7.93366939729675_6.68402780958517 chr10 78159308 78160059 + 6.68402780958517 NA Intergenic MLTR11B|LTR|ERVK 10085 NM_138601 28295 Mm.268691 NM_138601 ENSMUSG00000053329 D10Jhu81e C21orf33|ES1 DNA segment, Chr 10, Johns Hopkins University 81 expressed protein-coding common_peak2_32_312_-0.712698899271738_7.93366939729675_6.68402780958517 chr19 24960891 24961756 + 6.68402780958517 NA non-coding (NR_033744, exon 1 of 15) non-coding (NR_033744, exon 1 of 15) 293 NR_033744 226043 Mm.272127 NM_146097 ENSMUSG00000024878 Cbwd1 AV349248|BC018472 COBW domain containing 1 protein-coding common_peak2_140_1407_-0.312166015057993_10.3033486111083_6.68239404304988 chr2 26139198 26141438 + 6.68239404304988 NA promoter-TSS (NM_001256522) promoter-TSS (NM_001256522) 188 NM_001256521 109299 Mm.389259 NM_001256521 C330006A16Rik AI551216 RIKEN cDNA C330006A16 gene protein-coding common_peak1_13_145_-1.12987212004845_6.62488849885579_6.68155866455943 chr13 30625647 30625912 + 6.68155866455943 NA Intergenic ORR1D2|LTR|ERVL-MaLR 10736 NR_045975 75090 Mm.292232 NR_045975 ENSMUSG00000086263 4930519D14Rik - RIKEN cDNA 4930519D14 gene ncRNA common_peak1_60_266_0.603823519359418_8.36260769136726_6.68112056589345 chr16 15594030 15594699 + 6.68112056589345 NA intron (NM_001159351, intron 1 of 2) CpG 154 NM_001159351 70620 Mm.235407 NM_023585 ENSMUSG00000022674 Ube2v2 1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2 ubiquitin-conjugating enzyme E2 variant 2 protein-coding common_peak1_44_422_-0.598335215555318_8.42534624534229_6.68015338064716 chr2 126597662 126598395 + 6.68015338064716 NA intron (NM_008230, intron 9 of 11) intron (NM_008230, intron 9 of 11) 20650 NM_008230 15186 Mm.18603 NM_008230 ENSMUSG00000027360 Hdc AW108189|Hdc-a|Hdc-c|Hdc-e|Hdc-s histidine decarboxylase protein-coding common_peak2_163_1663_-0.285771830702954_10.5575538027896_6.67975958026727 chr2 180118081 180120529 + 6.67975958026727 NA promoter-TSS (NM_144500) promoter-TSS (NM_144500) -61 NM_144500 228983 Mm.253578 NM_144500 ENSMUSG00000039050 Osbpl2 C130070J12Rik|ORP-2|Orp2|mKIAA0772 oxysterol binding protein-like 2 protein-coding common_peak1_171_1170_0.305426432125447_10.3462385765639_6.67960927199069 chr6 97310775 97312808 + 6.67960927199069 NA intron (NM_145148, intron 12 of 23) intron (NM_145148, intron 12 of 23) -59011 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak2_76_733_-0.442914712070147_9.29817889680814_6.67950034115827 chr2 83643838 83645298 + 6.67950034115827 NA promoter-TSS (NM_026934) promoter-TSS (NM_026934) -10 NM_026934 69082 Mm.27804 NM_026934 ENSMUSG00000027091 Zc3h15 1700006A17Rik|1810012H02Rik|2610312B22Rik|FM22|Ierepo4 zinc finger CCCH-type containing 15 protein-coding common_peak1_67_644_-0.476394466963733_9.09495811682875_6.67905223374736 chr8 54419659 54421085 + 6.67905223374736 NA Intergenic Intergenic 109626 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak2_30_294_-0.737888939514898_7.83562667449176_6.67869398290306 chr9 108990826 108991751 + 6.67869398290306 NA promoter-TSS (NM_173019) promoter-TSS (NM_173019) -614 NM_173019 270198 Mm.132391 NM_173019 ENSMUSG00000025648 Pfkfb4 C230090D14 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 protein-coding common_peak1_66_306_0.568448854779545_8.54631927275995_6.67707487589741-3 chr6 90984366 90985302 + 6.67707487589741 NA Intergenic Intergenic 131992 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak1_66_306_0.568448854779545_8.54631927275995_6.67707487589741 chr13 51800156 51801351 + 6.67707487589741 NA Intergenic B4|SINE|B4 -7006 NM_013660 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_66_306_0.568448854779545_8.54631927275995_6.67707487589741-2 chr14 57711160 57712385 + 6.67707487589741 NA intron (NM_015771, intron 2 of 7) RMER5|LTR|ERV1 22646 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_103_1010_-0.372921414889371_9.79510657445833_6.67660295287949 chr9 22307109 22307983 + 6.67660295287949 NA promoter-TSS (NM_145612) promoter-TSS (NM_145612) 92 NM_145612 235050 Mm.306038 NM_145612 ENSMUSG00000066829 Zfp810 BC005471 zinc finger protein 810 protein-coding common_peak1_22_223_-0.868894117964094_7.37290786307556_6.66739147988649-2 chr7 58449291 58449700 + 6.66739147988649 NA Intergenic Intergenic -208707 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_22_223_-0.868894117964094_7.37290786307556_6.66739147988649 chr5 119321325 119321929 + 6.66739147988649 NA Intergenic Intergenic -121609 NR_046033 665194 Mm.491047 NR_046033 ENSMUSG00000107334 Gm7538 EG665194 predicted gene 7538 ncRNA common_peak2_178_1236_0.296914800446398_10.4210871851996_6.66726989482608 chr12 44209017 44210979 + 6.66726989482608 NA promoter-TSS (NM_013760) promoter-TSS (NM_013760) 70 NM_013760 27362 Mm.27432 NM_013760 ENSMUSG00000014905 Dnajb9 AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7 DnaJ heat shock protein family (Hsp40) member B9 protein-coding common_peak2_64_293_0.577242175496533_8.48829343258463_6.6670126370008 chr8 121184420 121185566 + 6.6670126370008 NA Intergenic Intergenic 57308 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak2_180_1255_0.294586566584734_10.441914032184_6.66472089973691 chr3 144569536 144571445 + 6.66472089973691 NA promoter-TSS (NM_011828) promoter-TSS (NM_011828) 63 NM_053102 93684 Mm.29812 NM_053102 ENSMUSG00000037072 Selenof 9430015P09Rik|Sep15 selenoprotein F protein-coding common_peak1_37_126_0.838291827811081_7.40783060067771_6.66470573079977 chr6 129753174 129753821 + 6.66470573079977 NA Intergenic Lx8|LINE|L1 -13013 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak2_37_126_0.838291827811081_7.40783060067771_6.66470573079977 chr9 48819006 48820084 + 6.66470573079977 NA intron (NM_001033324, intron 2 of 6) intron (NM_001033324, intron 2 of 6) 16400 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding common_peak2_57_246_0.626908394114247_8.2618214286418_6.66254125596299 chr11 96504101 96505360 + 6.66254125596299 NA intron (NM_001033186, intron 2 of 12) intron (NM_001033186, intron 2 of 12) 40139 NM_001177898 78473 Mm.395840 NM_001033186 ENSMUSG00000057058 Skap1 1700091G21Rik|Scap1|Skap-55 src family associated phosphoprotein 1 protein-coding common_peak1_57_246_0.626908394114247_8.2618214286418_6.66254125596299 chr4 150912215 150913226 + 6.66254125596299 NA Intergenic B3A|SINE|B2 -2799 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak1_24_61_1.13181888174951_6.52010575126163_6.6605040616408 chr13 52976888 52977545 + 6.6605040616408 NA intron (NM_017373, intron 1 of 1) intron (NM_017373, intron 1 of 1) 3823 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding unique_peak1_24_61_1.13181888174951_6.52010575126163_6.6605040616408 chr7 140374440 140375061 + 6.6605040616408 NA Intergenic Intergenic -1142 NM_146519 258512 Mm.377545 NM_146519 ENSMUSG00000060974 Olfr530 MOR252-2 olfactory receptor 530 protein-coding common_peak2_98_542_0.436646076009803_9.30313142580926_6.65936618387572 chr4 47352311 47354105 + 6.65936618387572 NA promoter-TSS (NM_009370) promoter-TSS (NM_009370) -14 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding unique_peak2_38_366_-0.646692803235353_8.19628985122554_6.65886505219415 chr7 112042118 112043719 + 6.65886505219415 NA intron (NM_133758, intron 1 of 27) L1MDa|LINE|L1 19412 NM_177249 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding common_peak1_38_366_-0.646692803235353_8.19628985122554_6.65886505219415 chr15 73170815 73171472 + 6.65886505219415 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 13804 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak2_106_605_0.415796435882822_9.45107220141436_6.65592034746502 chr8 11451639 11453831 + 6.65592034746502 NA Intergenic Intergenic -25194 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak1_193_2005_-0.258155216062416_10.841028282581_6.654252511472 chr8 124862292 124864025 + 6.654252511472 NA promoter-TSS (NM_025615) promoter-TSS (NM_025615) 125 NM_010322 14712 Mm.29114 NM_010322 ENSMUSG00000031985 Gnpat AU019525|D1Ertd819e|DHAPAT glyceronephosphate O-acyltransferase protein-coding common_peak1_124_1232_-0.333836305388136_10.1010389317088_6.65418759583965 chr10 80433004 80434266 + 6.65418759583965 NA promoter-TSS (NM_001164150) promoter-TSS (NM_001164150) 18 NM_001164150 21423 Mm.3406 NM_011548 ENSMUSG00000020167 Tcf3 A1|AA408400|ALF2|AW209082|E12|E12/E47|E2A|E47|KA1|ME2|Pan1|Pan2|TCF-3|Tcfe2a|VDIR|bHLHb21 transcription factor 3 protein-coding common_peak2_186_1924_-0.263725056367601_10.7787802022858_6.6537550472355 chr11 59838449 59840501 + 6.6537550472355 NA intron (NM_011991, intron 1 of 11) CpG 292 NM_011991 26572 Mm.40 NM_011991 ENSMUSG00000019373 Cops3 Csn3|Sgn3 COP9 signalosome subunit 3 protein-coding unique_peak2_5_77_-1.72485137314286_5.42297653229082_6.65345644503884 chr2 150385568 150386147 + 6.65345644503884 NA Intergenic Intergenic -23092 NM_027017 69277 Mm.272470 NM_027017 ENSMUSG00000063364 3300002I08Rik 2900016H11Rik RIKEN cDNA 3300002I08 gene protein-coding common_peak1_180_1856_-0.26955078445906_10.7239827077059_6.65293462836424 chr7 98655609 98657479 + 6.65293462836424 NA promoter-TSS (NM_172280) promoter-TSS (NM_172280) 25 NM_172280 233545 Mm.387819 NM_172280 ENSMUSG00000035401 Emsy 2210018M11Rik|2310016L09Rik|AU019521|AU019557 EMSY, BRCA2-interacting transcriptional repressor protein-coding common_peak2_94_916_-0.392308133319842_9.64462385693513_6.65164215157353 chr17 33928953 33931027 + 6.65164215157353 NA promoter-TSS (NM_009059) promoter-TSS (NM_009059) 96 NM_009059 19732 Mm.43777 NM_009059 ENSMUSG00000041354 Rgl2 KE1.5|Rab2l|Rgt2|Rlf ral guanine nucleotide dissociation stimulator-like 2 protein-coding common_peak2_46_178_0.719315310161761_7.84347343234514_6.65115350028355 chr1 95572447 95573648 + 6.65115350028355 NA Intergenic Intergenic 94547 NM_009183 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak1_46_178_0.719315310161761_7.84347343234514_6.65115350028355 chr14 118137072 118137895 + 6.65115350028355 NA intron (NM_021434, intron 1 of 8) CpG 356 NM_021434 58245 Mm.275411 NM_021434 ENSMUSG00000022131 Gpr180 AB041545|E130016I23Rik|Itr G protein-coupled receptor 180 protein-coding common_peak1_77_743_-0.439603050313814_9.31935728595112_6.65052247322291 chr7 35234187 35235459 + 6.65052247322291 NA Intergenic tRNA-Thr-ACY|tRNA|tRNA -19478 NM_001024707 435965 Mm.333783 NM_001024707 ENSMUSG00000001802 Lrp3 - low density lipoprotein receptor-related protein 3 protein-coding common_peak1_43_413_-0.607076903619017_8.38994850568982_6.64864878457534 chr2 126474265 126475154 + 6.64864878457534 NA intron (NM_001080944, intron 3 of 27) intron (NM_001080944, intron 3 of 27) 16844 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak1_43_413_-0.607076903619017_8.38994850568982_6.64864878457534-2 chr7 16119448 16120180 + 6.64864878457534 NA promoter-TSS (NM_133727) promoter-TSS (NM_133727) -62 NM_133727 70394 Mm.41101 NM_133727 ENSMUSG00000006021 Kptn 2310042D10Rik|2E4|C030013F01Rik kaptin protein-coding common_peak1_20_44_1.28562154746882_6.13466387006409_6.64657145189874-2 chr5 73197953 73198365 + 6.64657145189874 NA intron (NM_028194, intron 2 of 62) intron (NM_028194, intron 2 of 62) 58459 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_20_44_1.28562154746882_6.13466387006409_6.64657145189874 chr1 92813265 92813676 + 6.64657145189874 NA Intergenic Intergenic -18216 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak1_9_110_-1.32989394990569_6.12946889139726_6.64657145189872 chr6 87504987 87505275 + 6.64657145189872 NA intron (NM_001037727, intron 1 of 10) intron (NM_001037727, intron 1 of 10) -8804 NM_175476 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak2_78_391_0.507389246998109_8.86840446761426_6.64561794218242 chr8 77486296 77488564 + 6.64561794218242 NA intron (NM_030113, intron 1 of 22) B3|SINE|B2 -29626 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_17_179_-0.987167734457008_6.99826922910117_6.64437174863257 chr11 79521472 79521951 + 6.64437174863257 NA intron (NM_001077496, intron 1 of 1) B1F2|SINE|Alu 2051 NM_001077496 216984 Mm.439665 NM_001077496 ENSMUSG00000093938 Evi2b Evi-2|Evi2 ecotropic viral integration site 2b protein-coding common_peak1_52_497_-0.544260166624969_8.6878718487556_6.64404718681653 chr7 127421438 127422070 + 6.64404718681653 NA intron (NM_026999, intron 1 of 2) intron (NM_026999, intron 1 of 2) 280 NM_026999 69234 Mm.20301 NM_026999 ENSMUSG00000045251 Zfp688 2810407K09Rik|AI326029 zinc finger protein 688 protein-coding common_peak1_71_341_0.540057469359482_8.68788124956564_6.64404718681653 chr18 35864656 35865614 + 6.64404718681653 NA Intergenic Intergenic 35317 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_340_3807_-0.184754145445785_11.8024406905851_6.64193436831785 chr4 62478997 62482612 + 6.64193436831785 NA intron (NM_138653, intron 1 of 6) intron (NM_138653, intron 1 of 6) 737 NM_138653 192120 Mm.29808 NM_138653 ENSMUSG00000028392 Bspry - B-box and SPRY domain containing protein-coding common_peak2_111_646_0.40216747039813_9.53870563719157_6.64086914756286 chr15 8108576 8110176 + 6.64086914756286 NA promoter-TSS (NM_133227) promoter-TSS (NM_133227) 63 NM_133227 170762 Mm.295168 NM_133227 ENSMUSG00000022142 Nup155 D930027M19Rik|mKIAA0791 nucleoporin 155 protein-coding common_peak2_69_327_0.550506021091806_8.63280501516399_6.63820303598146 chr9 120030160 120031854 + 6.63820303598146 NA Intergenic Intergenic -7409 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak2_375_3322_0.184697443293055_11.7906192993386_6.63794184674066 chr7 4317081 4330158 + 6.63794184674066 NA Intergenic Intergenic -14105 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak1_15_162_-1.05247489110591_6.82249070867812_6.6371242579912 chr11 5433952 5434395 + 6.6371242579912 NA intron (NM_001080924, intron 1 of 8) intron (NM_001080924, intron 1 of 8) 10674 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding common_peak2_251_2694_-0.221235775315375_11.2854516699822_6.63699043190301 chr1 36555515 36559469 + 6.63699043190301 NA promoter-TSS (NM_001304330) promoter-TSS (NM_001304330) 65 NM_001304330 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding unique_peak2_8_102_-1.40842747649691_5.98228678893476_6.63510169362576-2 chr8 116504450 116504983 + 6.63510169362576 NA promoter-TSS (NM_029297) promoter-TSS (NM_029297) -299 NM_029297 75465 Mm.23114 NM_029297 ENSMUSG00000034467 Dynlrb2 1700009A04Rik|DNLC2B|Dncl2b dynein light chain roadblock-type 2 protein-coding unique_peak2_8_102_-1.40842747649691_5.98228678893476_6.63510169362576 chr13 21812876 21813659 + 6.63510169362576 NA Intergenic RLTR4_MM-int|LTR|ERV1 1483 NM_175657 319161 Mm.261664 NM_175657 ENSMUSG00000069305 Hist1h4n - histone cluster 1, H4n protein-coding common_peak1_407_3696_0.175368382499281_11.9398235194369_6.63482222074073 chr13 43267395 43271054 + 6.63482222074073 NA intron (NM_001033399, intron 1 of 1) MER21B|LTR|ERVL 34948 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak1_266_2116_0.229347330909883_11.1624792194625_6.63399469379057 chr8 84191419 84193456 + 6.63399469379057 NA Intergenic Intergenic -13476 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak1_83_803_-0.420352425007717_9.44087547867507_6.63386509784429 chr2 152293632 152294566 + 6.63386509784429 NA intron (NM_024196, intron 1 of 7) CpG 227 NM_024196 67231 Mm.288733 NM_024196 ENSMUSG00000027465 Tbc1d20 1110028I04Rik|2810442O16Rik|AI414693|bs TBC1 domain family, member 20 protein-coding common_peak1_36_121_0.849046313648524_7.35526049438715_6.63303486981563-2 chr13 52600700 52601430 + 6.63303486981563 NA intron (NM_011518, intron 1 of 13) B4|SINE|B4 4183 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak1_36_121_0.849046313648524_7.35526049438715_6.63303486981563-3 chr6 67339809 67340545 + 6.63303486981563 NA promoter-TSS (NM_001311141) promoter-TSS (NM_001311141) -483 NM_001311141 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak1_36_121_0.849046313648524_7.35526049438715_6.63303486981563 chr1 181865588 181866317 + 6.63303486981563 NA Intergenic Intergenic -23551 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_63_286_0.584570958822193_8.45719240608678_6.63290429277828 chr11 98526281 98527645 + 6.63290429277828 NA intron (NM_011771, intron 1 of 7) L1MC4|LINE|L1 19068 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding common_peak1_46_441_-0.584771471965414_8.49551682340872_6.6319481208297 chr3 103772503 103773257 + 6.6319481208297 NA intron (NM_010432, intron 2 of 15) intron (NM_010432, intron 2 of 15) 18395 NM_001301306 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding common_peak2_46_441_-0.584771471965414_8.49551682340872_6.6319481208297 chr15 102099915 102101361 + 6.6319481208297 NA Intergenic CpG -2350 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak1_26_70_1.07246044733491_6.68597734317214_6.63095469051669-2 chr9 82963988 82964600 + 6.63095469051669 NA intron (NM_001081216, intron 4 of 39) intron (NM_001081216, intron 4 of 39) 11195 NM_001081216 83946 Mm.221688 NM_031879 ENSMUSG00000032253 Phip 2810004D21Rik|4632404O06Rik|Ndrp|Wdr11 pleckstrin homology domain interacting protein protein-coding common_peak1_26_70_1.07246044733491_6.68597734317214_6.63095469051669 chr1 171120448 171121009 + 6.63095469051669 NA promoter-TSS (NM_001081275) promoter-TSS (NM_001081275) -933 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak1_151_1528_-0.298171554404847_10.4292869141584_6.63039411076836 chr6 108629749 108632040 + 6.63039411076836 NA intron (NR_104577, intron 1 of 6) ORR1D2|LTR|ERVL-MaLR -7727 NR_040757 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_281_3062_-0.2068517368333_11.4773037831823_6.63027342676427 chr17 29169418 29173802 + 6.63027342676427 NA intron (NM_153166, intron 12 of 20) intron (NM_153166, intron 12 of 20) 36554 NM_001002786 442827 Mm.440341 NM_001002786 ENSMUSG00000064147 Rab44 9830134C10Rik RAB44, member RAS oncogene family protein-coding common_peak1_61_273_0.595262432960135_8.3956632994406_6.62990252308651 chr15 77803083 77804140 + 6.62990252308651 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 38564 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_61_273_0.595262432960135_8.3956632994406_6.62990252308651-2 chrX 139684407 139685552 + 6.62990252308651 NA promoter-TSS (NM_001081499) promoter-TSS (NM_001081499) -17 NM_001081499 245638 Mm.275869 NM_001081499 ENSMUSG00000042473 Tbc1d8b 4921505D17Rik|9030605E16Rik TBC1 domain family, member 8B protein-coding common_peak2_61_273_0.595262432960135_8.3956632994406_6.62990252308651 chr14 66845727 66847597 + 6.62990252308651 NA intron (NM_009955, intron 3 of 13) intron (NM_009955, intron 3 of 13) 21938 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding common_peak2_116_1146_-0.346571710254679_9.99036382088848_6.62858746571156 chr2 113847781 113849624 + 6.62858746571156 NA promoter-TSS (NM_181416) promoter-TSS (NM_181416) -41 NM_181416 228482 Mm.45753 NM_181416 ENSMUSG00000041219 Arhgap11a 6530401L14Rik|mKIAA0013 Rho GTPase activating protein 11A protein-coding common_peak2_175_1208_0.300036147003896_10.3896166027511_6.62709888303664 chr13 41365749 41369067 + 6.62709888303664 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -8407 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_286_2329_0.218865134789253_11.2955468069363_6.62593139825691 chr5 123140756 123143799 + 6.62593139825691 NA promoter-TSS (NM_001040398) promoter-TSS (NM_001040398) 84 NM_001040398 208043 Mm.250391 NM_177581 ENSMUSG00000038384 Setd1b AA516740|BC035291|KMT2G|mKIAA1076 SET domain containing 1B protein-coding common_peak1_100_558_0.430143720762267_9.34177633322432_6.6227255917395 chr3 83055504 83056250 + 6.6227255917395 NA intron (NM_016784, intron 1 of 14) intron (NM_016784, intron 1 of 14) 339 NM_016784 53317 Mm.286349 NM_016784 ENSMUSG00000027998 Plrg1 AA958940|C80566|Tango4 pleiotropic regulator 1 protein-coding common_peak2_196_1408_0.278650720315664_10.5997812564675_6.62263694010208 chr3 69315700 69317797 + 6.62263694010208 NA promoter-TSS (NM_178726) promoter-TSS (NM_178726) -170 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding common_peak1_63_603_-0.488926853827198_8.99394131241148_6.6221585065216 chr10 4432497 4433310 + 6.6221585065216 NA promoter-TSS (NM_025343) promoter-TSS (NM_025343) 298 NM_024261 73419 Mm.346733 NM_024261 ENSMUSG00000061759 Armt1 1700052N19Rik|AW320013|AW536799 acidic residue methyltransferase 1 protein-coding common_peak1_271_2169_0.226506178387753_11.1967324165257_6.62178917991284 chr10 91123038 91124629 + 6.62178917991284 NA intron (NM_133668, intron 1 of 7) CpG-1454 130 NM_133668 18674 Mm.298 NM_133668 ENSMUSG00000061904 Slc25a3 5730556H19Rik|PTP|Phc solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 protein-coding common_peak1_200_2086_-0.252536668856829_10.9009465507314_6.62066170350841 chr13 37536480 37538699 + 6.62066170350841 NA Intergenic Intergenic 192244 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding common_peak1_20_205_-0.909025883384721_7.23198758549086_6.62039106992832 chr3 106449216 106449629 + 6.62039106992832 NA Intergenic Intergenic -33009 NM_001093754 72121 Mm.14816 NM_028110 ENSMUSG00000027901 Dennd2d 2010308M01Rik|AI451421 DENN/MADD domain containing 2D protein-coding common_peak2_61_584_-0.498998298550104_8.94279366519572_6.61992940121377-2 chr7 127769258 127770644 + 6.61992940121377 NA 5' UTR (NM_198424, exon 1 of 2) 5' UTR (NM_198424, exon 1 of 2) 136 NM_198424 269999 Mm.36852 NM_198424 ENSMUSG00000043964 Orai3 9930124N15|BC061259|Tmem142c ORAI calcium release-activated calcium modulator 3 protein-coding common_peak2_61_584_-0.498998298550104_8.94279366519572_6.61992940121377 chr12 33159843 33161266 + 6.61992940121377 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 12868 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_221_2333_-0.238058367156297_11.0695596621292_6.61890424455486 chr11 53762451 53765054 + 6.61890424455486 NA promoter-TSS (NR_106131) promoter-TSS (NR_106131) -98 NR_106131 102465772 NR_106131 ENSMUSG00000099153 Mir7671 Gm27802|mmu-mir-7671 microRNA 7671 ncRNA common_peak1_155_1572_-0.293134883435114_10.4727355136981_6.6181555772678-2 chr8 4237968 4239808 + 6.6181555772678 NA 5' UTR (NM_001164172, exon 1 of 12) 5' UTR (NM_001164172, exon 1 of 12) 148 NM_001164172 26400 Mm.3906 NM_011944 ENSMUSG00000002948 Map2k7 5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2 mitogen-activated protein kinase kinase 7 protein-coding common_peak1_155_1572_-0.293134883435114_10.4727355136981_6.6181555772678 chr7 127113414 127115482 + 6.6181555772678 NA intron (NM_133686, intron 1 of 3) intron (NM_133686, intron 1 of 3) 7581 NM_133686 67375 Mm.26928 NM_133686 ENSMUSG00000030674 Qprt 2410027J01Rik|AI647766|QPRTase quinolinate phosphoribosyltransferase protein-coding common_peak2_65_623_-0.481469960015012_9.04466723885474_6.61599914158792 chr7 67429589 67432374 + 6.61599914158792 NA Intergenic B1_Mm|SINE|Alu -58123 NM_001291195 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak1_84_436_0.480152378351892_9.01156565867655_6.61557211816638 chr17 70847429 70848516 + 6.61557211816638 NA intron (NM_001164074, intron 1 of 2) intron (NM_001164074, intron 1 of 2) -1195 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding common_peak1_26_257_-0.789019688583659_7.61671741113142_6.61520529247108 chr6 82913536 82914188 + 6.61520529247108 NA exon (NM_011350, exon 14 of 14) exon (NM_011350, exon 14 of 14) 25907 NM_001308374 20355 Mm.270543 NM_011350 ENSMUSG00000000627 Sema4f Sema W sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain protein-coding common_peak1_26_257_-0.789019688583659_7.61671741113142_6.61520529247108-2 chrX 159758452 159758950 + 6.61520529247108 NA intron (NM_021389, intron 1 of 16) intron (NM_021389, intron 1 of 16) 50100 NR_110970 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_41_149_0.775268264488974_7.61645282274037_6.61520529247108 chr6 54594994 54595849 + 6.61520529247108 NA 5' UTR (NM_001164361, exon 1 of 14) 5' UTR (NM_001164361, exon 1 of 14) 310 NM_001164361 231999 Mm.35416 NM_001001335 ENSMUSG00000005225 Plekha8 6330400G01|AA517676|BC052360|Fapp-2|Fapp2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 protein-coding unique_peak2_26_257_-0.789019688583659_7.61671741113142_6.61520529247108 chr4 135053085 135054422 + 6.61520529247108 NA Intergenic Intergenic -66892 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_345_3871_-0.183040394595688_11.8273430399767_6.61508707298723 chr11 70761825 70767258 + 6.61508707298723 NA promoter-TSS (NM_177565) promoter-TSS (NM_177565) 94 NM_177565 193043 Mm.40966 NM_177565 ENSMUSG00000043602 Zfp3 AI854635|B230309J24|Fnp-1|Zfp-3 zinc finger protein 3 protein-coding common_peak2_45_431_-0.589814386883603_8.45998030872167_6.61502371836197 chr6 125086539 125088344 + 6.61502371836197 NA Intergenic Intergenic -8722 NM_145979 107932 Mm.333388 NM_145979 ENSMUSG00000063870 Chd4 9530019N15Rik|AA617397|BC005710|D6Ertd380e|Mi-2beta|mKIAA4075 chromodomain helicase DNA binding protein 4 protein-coding common_peak1_45_431_-0.589814386883603_8.45998030872167_6.61502371836197 chr1 36511780 36512443 + 6.61502371836197 NA exon (NM_053186, exon 1 of 8) exon (NM_053186, exon 1 of 8) 235 NM_053186 94218 Mm.256323 NM_053186 ENSMUSG00000001138 Cnnm3 Acdp3|Clp3|mACDP3 cyclin M3 protein-coding common_peak1_335_3742_-0.18605544435604_11.7769516107219_6.61426231374224 chr11 77982567 77985529 + 6.61426231374224 NA exon (NM_174852, exon 2 of 15) exon (NM_174852, exon 2 of 15) 1232 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding common_peak1_67_643_-0.474155994767735_9.09383888073075_6.61381745068446 chr4 139202113 139203331 + 6.61381745068446 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 8611 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_218_2297_-0.239709540107199_11.0463083125925_6.613392499479 chr13 95890639 95892997 + 6.613392499479 NA 5' UTR (NM_027711, exon 1 of 36) 5' UTR (NM_027711, exon 1 of 36) 104 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding common_peak1_252_1970_0.237130156177876_11.0632771391324_6.61108704319157 chr11 44518541 44521079 + 6.61108704319157 NA intron (NM_001166553, intron 1 of 5) intron (NM_001166553, intron 1 of 5) 433 NM_001166553 74315 Mm.156771 NM_028862 ENSMUSG00000019189 Rnf145 3732413I11Rik|TMRF1 ring finger protein 145 protein-coding common_peak2_34_329_-0.684876499722282_8.02388396438467_6.61100836895191 chr10 118460951 118462435 + 6.61100836895191 NA Intergenic Lx8b|LINE|L1 20647 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak1_34_329_-0.684876499722282_8.02388396438467_6.61100836895191 chr1 97659427 97660188 + 6.61100836895191 NA intron (NM_133825, intron 1 of 2) intron (NM_133825, intron 1 of 2) 2211 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak1_34_329_-0.684876499722282_8.02388396438467_6.61100836895191-2 chr1 127309397 127310042 + 6.61100836895191 NA intron (NM_145128, intron 3 of 17) B4|SINE|B4 104733 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_90_874_-0.400794163999644_9.57274212471987_6.61086043892762 chr16 32643913 32645031 + 6.61086043892762 NA promoter-TSS (NM_001110147) promoter-TSS (NM_001110147) -171 NM_001110147 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding unique_peak1_18_36_1.39091083776794_5.90490878451292_6.60949942179915-2 chr15 82187221 82187644 + 6.60949942179915 NA intron (NM_033218, intron 11 of 18) intron (NM_033218, intron 11 of 18) -10690 NR_029804 723897 NR_029804 ENSMUSG00000065465 Mir33 Mirn33|mir-33|mmu-mir-33 microRNA 33 ncRNA common_peak1_18_36_1.39091083776794_5.90490878451292_6.60949942179915-2 chr5 100798880 100799352 + 6.60949942179915 NA promoter-TSS (NM_001081107) promoter-TSS (NM_001081107) 357 NM_026826 68735 Mm.25585 NM_026826 ENSMUSG00000016833 Mrps18c 1110037D14Rik mitochondrial ribosomal protein S18C protein-coding common_peak1_18_36_1.39091083776794_5.90490878451292_6.60949942179915 chr2 35454579 35455060 + 6.60949942179915 NA intron (NM_001308299, intron 1 of 7) B3|SINE|B2 6630 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding unique_peak1_18_36_1.39091083776794_5.90490878451292_6.60949942179915 chr13 34129999 34130484 + 6.60949942179915 NA 5' UTR (NM_023716, exon 1 of 4) 5' UTR (NM_023716, exon 1 of 4) 113 NM_023716 73710 Mm.379227 NM_023716 ENSMUSG00000045136 Tubb2b 2410129E14Rik|brdp tubulin, beta 2B class IIB protein-coding common_peak1_118_1167_-0.342752188640373_10.0184484645598_6.6091971967932 chr7 19665080 19666002 + 6.6091971967932 NA promoter-TSS (NM_019649) promoter-TSS (NM_019649) -511 NM_019649 56457 Mm.290960 NM_019649 ENSMUSG00000002981 Clptm1 HS9|N14 cleft lip and palate associated transmembrane protein 1 protein-coding common_peak1_25_66_1.08933205418316_6.61075521754935_6.6086783954929 chr6 31111949 31112557 + 6.6086783954929 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -49160 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_215_1595_0.261799564176318_10.7711447183105_6.60700271060503 chr17 21649606 21653183 + 6.60700271060503 NA intron (NM_001166497, intron 1 of 5) intron (NM_001166497, intron 1 of 5) 783 NM_001166497 73229 Mm.296733 NM_001166497 ENSMUSG00000035868 Zfp983 3110052M02Rik|mszf57|mszf71 zinc finger protein 983 protein-coding common_peak1_51_209_0.667788038161166_8.0481395367467_6.6059038867348 chr11 3291597 3292562 + 6.6059038867348 NA intron (NM_019574, intron 1 of 3) intron (NM_019574, intron 1 of 3) 1622 NM_019574 56218 Mm.275563 NM_019574 ENSMUSG00000020453 Patz1 8430401L15Rik|AI447519|Mazr|Patz|Zfp278 POZ (BTB) and AT hook containing zinc finger 1 protein-coding common_peak1_21_213_-0.881669243707195_7.30063236454755_6.60443042634588-2 chr6 136490526 136490985 + 6.60443042634588 NA Intergenic RMER17C|LTR|ERVK -28096 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding unique_peak2_21_213_-0.881669243707195_7.30063236454755_6.60443042634588 chr2 11546181 11547484 + 6.60443042634588 NA intron (NM_001177758, intron 1 of 14) intron (NM_001177758, intron 1 of 14) 7097 NM_001177758 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding common_peak1_21_213_-0.881669243707195_7.30063236454755_6.60443042634588 chr11 97111194 97111609 + 6.60443042634588 NA intron (NM_019507, intron 1 of 5) B4|SINE|B4 3930 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding common_peak1_323_2734_0.202241587685672_11.5184459115228_6.60422535380948 chr6 38341490 38344795 + 6.60422535380948 NA intron (NM_028864, intron 1 of 8) intron (NM_028864, intron 1 of 8) 11461 NM_028864 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding common_peak1_40_143_0.791518263623114_7.56568413325387_6.60334080826761 chr10 81127125 81128011 + 6.60334080826761 NA Intergenic Intergenic -8703 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak1_40_143_0.791518263623114_7.56568413325387_6.60334080826761-2 chr2 151973756 151974367 + 6.60334080826761 NA promoter-TSS (NM_028666) promoter-TSS (NM_028666) -80 NM_028666 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding unique_peak2_18_187_-0.954224648280747_7.07747652753726_6.60237883702696 chr10 75354272 75355167 + 6.60237883702696 NA Intergenic B3A|SINE|B2 2664 NR_033602 544707 Mm.349862 NR_033602 Gm5779 EG544707 ribosomal protein, large, P0 pseudogene pseudo common_peak2_105_1029_-0.366074545441112_9.82539134935002_6.60168149664253 chr7 36695843 36698901 + 6.60168149664253 NA promoter-TSS (NM_172298) promoter-TSS (NM_172298) -746 NM_172298 243931 Mm.44141 NM_172298 ENSMUSG00000021217 Tshz3 A630038G13Rik|Tsh3|Zfp537|mKIAA1474|teashirt3 teashirt zinc finger family member 3 protein-coding common_peak1_27_75_1.03863723657434_6.76724613173076_6.60162373663189-2 chr3 28781269 28781888 + 6.60162373663189 NA intron (NM_177586, intron 1 of 4) CpG 267 NM_177586 208691 Mm.193670 NM_177586 ENSMUSG00000050192 Eif5a2 9630038B20|eIF5AII eukaryotic translation initiation factor 5A2 protein-coding unique_peak2_27_75_1.03863723657434_6.76724613173076_6.60162373663189 chr6 31130082 31130720 + 6.60162373663189 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -67308 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_27_75_1.03863723657434_6.76724613173076_6.60162373663189-3 chr8 34157543 34158129 + 6.60162373663189 NA intron (NM_026432, intron 1 of 5) intron (NM_026432, intron 1 of 5) 3273 NM_026432 67887 Mm.290353 NM_026432 ENSMUSG00000031532 Saraf 1810045K07Rik|Tmem66 store-operated calcium entry-associated regulatory factor protein-coding common_peak1_27_75_1.03863723657434_6.76724613173076_6.60162373663189 chr16 64789299 64789775 + 6.60162373663189 NA Intergenic Intergenic -3216 NM_028059 72020 Mm.25960 NM_028059 ENSMUSG00000047141 Zfp654 1600021C16Rik|1810008K20Rik|433036|Gm5488|Znf654 zinc finger protein 654 protein-coding common_peak1_40_384_-0.627271370516838_8.27507895032385_6.60129639394839 chr17 24426495 24427192 + 6.60129639394839 NA TTS (NM_009070) TTS (NM_009070) 160 NM_010023 13177 Mm.291743 NM_010023 ENSMUSG00000024132 Eci1 Dci|eci enoyl-Coenzyme A delta isomerase 1 protein-coding common_peak1_114_671_0.39424896819307_9.58944190687529_6.60087907143031 chr1 12644662 12644950 + 6.60087907143031 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -22757 NR_045297 329096 Mm.417782 NR_045297 ENSMUSG00000097171 Gm17644 4932411L15 predicted gene, 17644 ncRNA unique_peak2_10_119_-1.27370516410092_6.27003801355806_6.60083480567806-2 chr3 96564304 96565241 + 6.60083480567806 NA intron (NR_040409, intron 1 of 3) intron (NR_040409, intron 1 of 3) 2029 NR_040409 100038464 Mm.475126 NR_040409 ENSMUSG00000074398 Gm15441 ENSMUSG00000074398|OTTMUSG00000021867 predicted gene 15441 ncRNA unique_peak2_10_119_-1.27370516410092_6.27003801355806_6.60083480567806-3 chr7 127935026 127936001 + 6.60083480567806 NA exon (NM_001081374, exon 10 of 15) exon (NM_001081374, exon 10 of 15) -5400 NM_133351 76560 Mm.5875 NM_133351 ENSMUSG00000030800 Prss8 2410039E18Rik|AI313909|C79772|CAP1|fr|mCAP1 protease, serine 8 (prostasin) protein-coding unique_peak2_10_119_-1.27370516410092_6.27003801355806_6.60083480567806 chr13 24419332 24420489 + 6.60083480567806 NA intron (NM_001284520, intron 3 of 14) B4A|SINE|B4 4788 NM_001284520 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding common_peak2_44_166_0.74247434509058_7.75494146501934_6.60068850760392 chr11 94995150 94996490 + 6.60068850760392 NA intron (NM_172261, intron 1 of 9) intron (NM_172261, intron 1 of 9) 4608 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding common_peak1_33_105_0.902228117597328_7.17903451336186_6.6005863197785-2 chr4 62674986 62675671 + 6.6005863197785 NA intron (NM_001310706, intron 1 of 6) MIR3|SINE|MIR 1354 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_33_105_0.902228117597328_7.17903451336186_6.6005863197785 chr12 26455903 26456681 + 6.6005863197785 NA exon (NM_021384, exon 1 of 6) exon (NM_021384, exon 1 of 6) 160 NM_021384 58185 Mm.24045 NM_021384 ENSMUSG00000020641 Rsad2 2510004L01Rik|Vig1|cig5 radical S-adenosyl methionine domain containing 2 protein-coding common_peak1_33_105_0.902228117597328_7.17903451336186_6.6005863197785 chr2 132576391 132577123 + 6.6005863197785 NA intron (NM_001291051, intron 1 of 18) intron (NM_001291051, intron 1 of 18) 1491 NM_001291050 74182 Mm.211211 NM_027096 ENSMUSG00000027346 Gpcpd1 2310004G06Rik|2310032D16Rik|AU015213|Gde5|Prei4|mKIAA1434 glycerophosphocholine phosphodiesterase 1 protein-coding common_peak1_139_1394_-0.311379069820305_10.2903598718064_6.59988203421951 chr16 4677598 4679807 + 6.59988203421951 NA intron (NM_030205, intron 1 of 27) intron (NM_030205, intron 1 of 27) 1018 NM_030205 78885 Mm.325512 NM_030205 ENSMUSG00000039637 Coro7 0610011B16Rik|AW048373|AW556392 coronin 7 protein-coding common_peak2_162_1650_-0.285279960991888_10.5464844244173_6.59976853103096 chr4 43935662 43938557 + 6.59976853103096 NA intron (NM_016678, intron 16 of 20) intron (NM_016678, intron 16 of 20) -20593 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak1_149_1504_-0.298785752171041_10.4061548955615_6.59975968834956 chr6 128842235 128843771 + 6.59975968834956 NA Intergenic CpG -16688 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak2_82_792_-0.421671186535631_9.42034146243616_6.59898946635897 chrX 75415398 75417370 + 6.59898946635897 NA promoter-TSS (NM_001166459) promoter-TSS (NM_001166459) 200 NM_010839 105886298 Mm.16366 NM_010839 ENSMUSG00000090110 Cmc4 Mtcp1nb|p8MTCP1 C-x(9)-C motif containing 4 protein-coding common_peak1_82_792_-0.421671186535631_9.42034146243616_6.59898946635897 chr12 36041724 36042677 + 6.59898946635897 NA intron (NM_025359, intron 1 of 5) CpG 278 NM_025359 66109 Mm.254663 NM_025359 ENSMUSG00000020577 Tspan13 1100001I23Rik|NET-6|Tm4sf13 tetraspanin 13 protein-coding common_peak2_72_349_0.531107914553299_8.71676506910898_6.59688372547264 chr11 98526389 98528047 + 6.59688372547264 NA intron (NM_011771, intron 1 of 7) intron (NM_011771, intron 1 of 7) 18813 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding common_peak2_72_349_0.531107914553299_8.71676506910898_6.59688372547264-2 chr19 34640097 34641309 + 6.59688372547264 NA promoter-TSS (NM_053217) promoter-TSS (NM_053217) 40 NM_053217 112419 Mm.440727 NM_053217 ENSMUSG00000067297 Ifit1bl2 2010002M12Rik|AW412491|Ifit1b interferon induced protein with tetratricopeptide repeats 1B like 2 protein-coding common_peak2_88_853_-0.405073890856302_9.53555531419234_6.59280660750801 chr8 86869541 86872018 + 6.59280660750801 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 14479 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_133_1328_-0.318969377940094_10.2166407003061_6.59030776022584 chr1 75124088 75125506 + 6.59030776022584 NA TTS (NM_194333) TTS (NM_194333) 9093 NM_194333 22626 Mm.68157 NM_194333 ENSMUSG00000026205 Slc23a3 SVCT3|Yspl1 solute carrier family 23 (nucleobase transporters), member 3 protein-coding common_peak1_28_275_-0.7598611422656_7.72859388564537_6.5895780168595-2 chr6 106768992 106769618 + 6.5895780168595 NA intron (NM_001242358, intron 1 of 8) CpG 167 NM_001242358 70047 Mm.196332 NM_027296 ENSMUSG00000013736 Trnt1 2410043H24Rik|2610044E04Rik|9830143O18Rik|AA408384|C76540|CGI-47|mt-Trat tRNA nucleotidyl transferase, CCA-adding, 1 protein-coding unique_peak2_28_275_-0.7598611422656_7.72859388564537_6.5895780168595 chr7 66152980 66154660 + 6.5895780168595 NA intron (NM_001081163, intron 2 of 2) intron (NM_001081163, intron 2 of 2) 44305 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_28_275_-0.7598611422656_7.72859388564537_6.5895780168595 chr1 161792085 161792806 + 6.5895780168595 NA Intergenic LTR33B|LTR|ERVL -3950 NM_010177 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_62_593_-0.492709960848984_8.96796414037627_6.5867301824688 chr7 80026961 80027845 + 6.5867301824688 NA intron (NM_175433, intron 1 of 4) CpG 1175 NM_175433 209225 Mm.290925 NM_175433 ENSMUSG00000048897 Zfp710 5430400N05Rik|9830165K13|AI324798|Znf710 zinc finger protein 710 protein-coding common_peak1_60_574_-0.502898694784765_8.91596879843935_6.58586743649811 chr2 163419770 163420445 + 6.58586743649811 NA promoter-TSS (NM_025699) promoter-TSS (NM_025699) -637 NM_025699 66680 Mm.25119 NM_025699 ENSMUSG00000035399 Oser1 3230401D17Rik|AI256769|Perit1 oxidative stress responsive serine rich 1 protein-coding common_peak1_14_153_-1.08474241928355_6.72441533105312_6.58565947229696-2 chr6 136468895 136469249 + 6.58565947229696 NA Intergenic Intergenic -49779 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_14_153_-1.08474241928355_6.72441533105312_6.58565947229696 chr19 41933455 41933869 + 6.58565947229696 NA promoter-TSS (NM_025644) promoter-TSS (NM_025644) 190 NM_023740 74168 Mm.20387 NM_023740 ENSMUSG00000025157 Zdhhc16 1500015N03Rik|Aph2 zinc finger, DHHC domain containing 16 protein-coding unique_peak2_31_302_-0.720308409161428_7.88301977889224_6.5849572336986 chr18 30266879 30268533 + 6.5849572336986 NA Intergenic RLTR4_MM-int|LTR|ERV1 -5190 NM_181414 225326 Mm.194127 NM_181414 ENSMUSG00000033628 Pik3c3 5330434F23Rik|Vps34 phosphoinositide-3-kinase, class 3 protein-coding common_peak2_47_184_0.70900631876214_7.88588461989738_6.5849572336986 chr13 96388262 96389031 + 6.5849572336986 NA intron (NM_026173, intron 1 of 12) intron (NM_026173, intron 1 of 12) 352 NM_026173 67463 Mm.86472 NM_026173 ENSMUSG00000021671 Poc5 1200014M14Rik|AV144706 POC5 centriolar protein protein-coding common_peak1_31_302_-0.720308409161428_7.88301977889224_6.5849572336986 chr10 59636631 59637375 + 6.5849572336986 NA Intergenic Intergenic -20311 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak1_201_2097_-0.251338457785456_10.9091297336845_6.58455249518711 chr9 90259786 90261449 + 6.58455249518711 NA intron (NM_194334, intron 1 of 12) intron (NM_194334, intron 1 of 12) 10152 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak1_29_284_-0.746161676454402_7.7817372708249_6.5840160376515 chr1 180371925 180372520 + 6.5840160376515 NA intron (NM_001081175, intron 2 of 7) MLT1A1|LTR|ERVL-MaLR -41673 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_115_680_0.390376948873209_9.60669946244868_6.58334591638847 chr2 18766726 18767788 + 6.58334591638847 NA Intergenic CpG -6395 NR_126079 100041479 Mm.393659 NR_126079 ENSMUSG00000092353 Gm3363 - predicted gene 3363 ncRNA common_peak1_28_80_1.00881331162794_6.8442566586986_6.58277293482215 chr4 123283782 123284330 + 6.58277293482215 NA intron (NM_148917, intron 1 of 13) intron (NM_148917, intron 1 of 13) 771 NM_148917 230721 Mm.277091 NM_130881 ENSMUSG00000011257 Pabpc4 - poly(A) binding protein, cytoplasmic 4 protein-coding common_peak2_28_80_1.00881331162794_6.8442566586986_6.58277293482215 chr10 62946881 62947549 + 6.58277293482215 NA TTS (NM_175194) TTS (NM_175194) 186 NM_177372 327762 Mm.21492 NM_177372 ENSMUSG00000036875 Dna2 Dna2l|E130315B21Rik DNA replication helicase/nuclease 2 protein-coding common_peak1_62_280_0.587182839730856_8.42801774008635_6.58153731830328 chr17 27856433 27857596 + 6.58153731830328 NA intron (NM_001080769, intron 1 of 20) CpG 507 NM_001080769 224648 Mm.291291 NM_001080769 ENSMUSG00000039512 Uhrf1bp1 1110020K19Rik|AA408674|F830021D11Rik|mKIAA4127 UHRF1 (ICBP90) binding protein 1 protein-coding common_peak2_60_267_0.5984302605892_8.36530432075237_6.58015527146945 chr18 60744144 60745709 + 6.58015527146945 NA Intergenic Intergenic -29670 NM_020600 20044 Mm.43778 NM_020600 ENSMUSG00000024608 Rps14 2600014J02Rik|AL023078 ribosomal protein S14 protein-coding common_peak1_60_267_0.5984302605892_8.36530432075237_6.58015527146945 chr16 17405993 17406652 + 6.58015527146945 NA promoter-TSS (NM_001001983) promoter-TSS (NM_001001983) -8 NM_001001983 224020 Mm.5718 NM_001001983 ENSMUSG00000041720 Pi4ka Pik4ca phosphatidylinositol 4-kinase, catalytic, alpha polypeptide protein-coding common_peak1_64_613_-0.485180325037282_9.01950468285154_6.57922241201001 chr16 49772034 49772947 + 6.57922241201001 NA Intergenic Intergenic 73196 NM_028680 73916 Mm.241276 NM_028680 ENSMUSG00000032965 Ift57 4833420A15Rik|Esrrbl1|Hippi|MHS4R2 intraflagellar transport 57 protein-coding common_peak2_50_478_-0.556211068608723_8.62577631143182_6.57875551849105 chr13 74316474 74318239 + 6.57875551849105 NA promoter-TSS (NM_011051) promoter-TSS (NM_011051) -30 NM_011051 18570 Mm.24254 NM_011051 ENSMUSG00000021576 Pdcd6 AV299538|Alg2|MA-3|PS2|alg-2 programmed cell death 6 protein-coding common_peak1_50_478_-0.556211068608723_8.62577631143182_6.57875551849105 chr7 127769654 127770373 + 6.57875551849105 NA exon (NM_198424, exon 1 of 2) exon (NM_198424, exon 1 of 2) 198 NM_198424 269999 Mm.36852 NM_198424 ENSMUSG00000043964 Orai3 9930124N15|BC061259|Tmem142c ORAI calcium release-activated calcium modulator 3 protein-coding common_peak2_457_4298_0.162294810961226_12.1509328004639_6.57797250096804 chr5 24744518 24752892 + 6.57797250096804 NA Intergenic B1_Mus2|SINE|Alu 9138 NM_153076 214301 Mm.63484 NM_153076 ENSMUSG00000038135 Crygn - crystallin, gamma N protein-coding common_peak1_178_1831_-0.269659202674175_10.7043741867599_6.57764988213179 chr7 5014058 5016056 + 6.57764988213179 NA promoter-TSS (NM_001110329) promoter-TSS (NM_001110329) -329 NM_001110329 23877 Mm.38911 NM_011813 ENSMUSG00000061374 Fiz1 AI790204|mFLJ00416 Flt3 interacting zinc finger protein 1 protein-coding common_peak2_217_2284_-0.23962390322944_11.0381664983307_6.57716124421754 chr7 80786513 80791624 + 6.57716124421754 NA intron (NM_016721, intron 2 of 37) AT_rich|Low_complexity|Low_complexity 14263 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_177_1228_0.296361479577882_10.4114499401616_6.57666487455983 chr5 34541743 34545900 + 6.57666487455983 NA intron (NM_001145858, intron 1 of 12) intron (NM_001145858, intron 1 of 12) 456 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak1_185_1911_-0.263437775906802_10.7691479200273_6.57644098945143 chr1 184033253 184034369 + 6.57644098945143 NA promoter-TSS (NM_022019) promoter-TSS (NM_022019) 187 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding unique_peak2_73_701_-0.448931257906795_9.23086159135116_6.57567079538821 chr4 101215636 101219148 + 6.57567079538821 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 47890 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_218_1625_0.259342000463887_10.796782542307_6.57526683433696 chr1 58652150 58653473 + 6.57526683433696 NA intron (NR_045007, intron 1 of 1) intron (NR_045007, intron 1 of 1) 170 NR_045007 100504501 Mm.440933 NR_045007 ENSMUSG00000102059 Gm20257 - caspase 8 pseudogene pseudo unique_peak2_31_95_0.937903073590368_7.05391403751634_6.57504800877636 chr2 26122380 26123125 + 6.57504800877636 NA promoter-TSS (NM_026495) promoter-TSS (NM_026495) 59 NM_026495 67991 Mm.131074 NM_026495 ENSMUSG00000026932 Nacc2 0610020I02Rik|AI448087|Btbd14a|C030048H19Rik nucleus accumbens associated 2, BEN and BTB (POZ) domain containing protein-coding common_peak1_121_730_0.377404166280892_9.70242967909288_6.57494232404115 chr3 144201472 144202855 + 6.57494232404115 NA 5' UTR (NM_001161770, exon 1 of 4) 5' UTR (NM_001161770, exon 1 of 4) 169 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_29_85_0.982391677895605_6.9174605936499_6.57285819934217 chr4 59242504 59243135 + 6.57285819934217 NA Intergenic B4A|SINE|B4 -17232 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_16_170_-1.01431625391173_6.91069438793004_6.57285819934214 chr12 111713358 111713655 + 6.57285819934214 NA promoter-TSS (NM_027404) promoter-TSS (NM_027404) 237 NM_026511 68020 Mm.425762 NM_026511 ENSMUSG00000037787 Apopt1 1700081D05Rik|2810002N01Rik|Apop-1|Apop1 apoptogenic, mitochondrial 1 protein-coding common_peak1_103_1008_-0.370064592092714_9.79367816306_6.57246678805105 chrX 36980720 36981972 + 6.57246678805105 NA intron (NM_001177323, intron 1 of 9) intron (NM_001177323, intron 1 of 9) 8349 NM_001177324 56526 Mm.260036 NM_019942 ENSMUSG00000050379 Sept6 2810035H17Rik|C920001C06Rik|Sep6|mKIAA0128 septin 6 protein-coding common_peak2_103_1008_-0.370064592092714_9.79367816306_6.57246678805105 chr19 57122283 57124850 + 6.57246678805105 NA intron (NM_001290813, intron 6 of 20) intron (NM_001290813, intron 6 of 20) -4542 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_473_4494_0.158740518051147_12.2134756594274_6.572436035157 chr17 88062864 88067139 + 6.572436035157 NA intron (NM_001081034, intron 1 of 22) CpG 284 NM_001081034 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding common_peak1_157_1593_-0.2897245116908_10.4935736581451_6.57184686037687 chr10 78160142 78162083 + 6.57184686037687 NA TTS (NM_138601) TTS (NM_138601) 8656 NM_138601 28295 Mm.268691 NM_138601 ENSMUSG00000053329 D10Jhu81e C21orf33|ES1 DNA segment, Chr 10, Johns Hopkins University 81 expressed protein-coding common_peak2_268_2139_0.226964040280498_11.1768771014288_6.57113402387513 chr16 11454815 11457418 + 6.57113402387513 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 50468 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding unique_peak1_14_22_1.65848216535433_5.35280303873418_6.57100484818347-3 chr18 38995452 38995746 + 6.57100484818347 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 2454 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding unique_peak1_14_22_1.65848216535433_5.35280303873418_6.57100484818347-4 chr18 74294937 74295281 + 6.57100484818347 NA intron (NR_029424, intron 2 of 8) intron (NR_029424, intron 2 of 8) 12009 NM_028948 74453 Mm.182293 NM_028948 ENSMUSG00000035394 Cfap53 4933415I03Rik|Ccdc11 cilia and flagella associated protein 53 protein-coding unique_peak1_14_22_1.65848216535433_5.35280303873418_6.57100484818347-2 chr11 118141905 118142288 + 6.57100484818347 NA Intergenic Intergenic -12877 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding unique_peak1_14_22_1.65848216535433_5.35280303873418_6.57100484818347 chr1 171966431 171966821 + 6.57100484818347 NA Intergenic PB1D9|SINE|Alu 49089 NM_030710 30925 Mm.486404 NM_030710 ENSMUSG00000015314 Slamf6 KAL1|KAL1b|Ly108|NTB-A|NTBA|SF2000 SLAM family member 6 protein-coding unique_peak1_14_22_1.65848216535433_5.35280303873418_6.57100484818347-5 chr5 118361802 118362232 + 6.57100484818347 NA Intergenic ID4_|SINE|ID 116790 NM_001081236 76792 Mm.103428 NM_001081236 ENSMUSG00000032840 2410131K14Rik - RIKEN cDNA 2410131K14 gene protein-coding common_peak2_57_544_-0.514836793965364_8.83269402268161_6.57089036946221 chr9 44379518 44380481 + 6.57089036946221 NA intron (NM_021395, intron 1 of 25) intron (NM_021395, intron 1 of 25) 509 NM_021395 12282 Mm.116721 NM_021395 ENSMUSG00000032115 Hyou1 AI415631|CBP-140|Cab140|Grp170|Orp150 hypoxia up-regulated 1 protein-coding common_peak1_30_90_0.95888756453561_6.9872384224665_6.57062604918435 chr18 79061811 79062432 + 6.57062604918435 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 47270 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak2_30_90_0.95888756453561_6.9872384224665_6.57062604918435-2 chr6 50385308 50386042 + 6.57062604918435 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -2838 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_30_90_0.95888756453561_6.9872384224665_6.57062604918435 chr13 62129752 62130316 + 6.57062604918435 NA intron (NM_001039239, intron 1 of 3) intron (NM_001039239, intron 1 of 3) 144 NM_001039239 630579 Mm.440905 NM_001039239 ENSMUSG00000074867 Zfp808 EG630579|Gm7036 zinc finger protein 80 protein-coding common_peak1_52_496_-0.541360276119175_8.6864219035027_6.57008280163743 chr8 72492839 72493572 + 6.57008280163743 NA promoter-TSS (NM_177766) promoter-TSS (NM_177766) -591 NM_177766 270066 Mm.291461 NM_177766 ENSMUSG00000019731 Slc35e1 6030458H05|AA408278 solute carrier family 35, member E1 protein-coding common_peak1_86_451_0.472618868250665_9.05648839654052_6.56870961217932 chr1 153087279 153088474 + 6.56870961217932 NA intron (NM_175460, intron 5 of 10) ORR1F|LTR|ERVL-MaLR 98571 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak1_145_1460_-0.303809125231512_10.3608359001877_6.56864765143375 chr17 28522528 28524075 + 6.56864765143375 NA Intergenic CpG -7560 NM_026290 67645 Mm.46170 NM_026290 ENSMUSG00000024223 Armc12 4930511I11Rik|AV041658 armadillo repeat containing 12 protein-coding common_peak2_50_203_0.675245435155961_8.01004805954948_6.56848051382724 chr9 35113706 35114996 + 6.56848051382724 NA intron (NM_009178, intron 1 of 10) intron (NM_009178, intron 1 of 10) -2377 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak1_249_2667_-0.220809860983524_11.2711380206928_6.56757936213364 chr9 65540903 65543053 + 6.56757936213364 NA Intergenic Intergenic 38109 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_43_412_-0.603587917539139_8.38820401264988_6.56756835622127 chr19 6341121 6341916 + 6.56756835622127 NA TTS (NM_001168488) TTS (NM_001168488) 358 NR_117093 26412 Mm.25860 NM_009006 ENSMUSG00000024948 Map4k2 AI385662|BL44|GCK|Rab8ip mitogen-activated protein kinase kinase kinase kinase 2 protein-coding common_peak1_43_412_-0.603587917539139_8.38820401264988_6.56756835622127-2 chr8 15027197 15028004 + 6.56756835622127 NA exon (NM_029116, exon 2 of 2) exon (NM_029116, exon 2 of 2) 16575 NM_029116 74901 Mm.46675 NM_029116 ENSMUSG00000055675 Kbtbd11 2900016B01Rik|4930465M17Rik|mKIAA0711 kelch repeat and BTB (POZ) domain containing 11 protein-coding common_peak2_117_1156_-0.344034432879308_10.0041559326678_6.56710460148681 chr14 55094374 55096333 + 6.56710460148681 NA 5' UTR (NM_153083, exon 1 of 2) 5' UTR (NM_153083, exon 1 of 2) 569 NM_153083 105663 Mm.319204 NM_153083 ENSMUSG00000045691 Thtpa AW122966 thiamine triphosphatase protein-coding common_peak1_123_1220_-0.333940657880385_10.0868771560472_6.56445181730105 chr3 88412709 88414347 + 6.56445181730105 NA intron (NM_001145877, intron 2 of 2) intron (NM_001145877, intron 2 of 2) -3131 NM_025928 67037 Mm.36715 NM_025928 ENSMUSG00000028066 Pmf1 2600009M07Rik|AL033286|AW060657 polyamine-modulated factor 1 protein-coding common_peak2_100_976_-0.375366558362927_9.74453147278692_6.56398824989331 chr10 81626632 81628490 + 6.56398824989331 NA promoter-TSS (NM_001163430) promoter-TSS (NM_001163430) 47 NM_181586 50721 Mm.25643 NM_181586 ENSMUSG00000034748 Sirt6 2810449N18Rik|AI043036|Sir2l6 sirtuin 6 protein-coding common_peak2_39_138_0.798805466093625_7.51834380577032_6.56129412422385 chr12 101021588 101022906 + 6.56129412422385 NA promoter-TSS (NR_035421) promoter-TSS (NR_035421) -479 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak2_104_1018_-0.367358105488995_9.80925928342132_6.56114782040952 chr2 60018092 60020220 + 6.56114782040952 NA intron (NM_001001182, intron 2 of 35) intron (NM_001001182, intron 2 of 35) 106584 NM_001001182 407823 Mm.228071 NM_001001182 ENSMUSG00000026987 Baz2b 5830435C13Rik|BC053917|D2Ertd794e bromodomain adjacent to zinc finger domain, 2B protein-coding common_peak1_22_222_-0.862439095826795_7.36968035200691_6.55747973454548 chr10 18008444 18008979 + 6.55747973454548 NA Intergenic Intergenic 14541 NM_028440 73112 Mm.276041 NM_028440 ENSMUSG00000078453 Abracl 1700028I04Rik|3110003A17Rik ABRA C-terminal like protein-coding unique_peak2_22_222_-0.862439095826795_7.36968035200691_6.55747973454548 chr11 72945858 72947069 + 6.55747973454548 NA Intergenic Intergenic -14706 NM_016745 53313 Mm.6306 NM_016745 ENSMUSG00000020788 Atp2a3 SERCA3b|Serca3 ATPase, Ca++ transporting, ubiquitous protein-coding common_peak1_22_222_-0.862439095826795_7.36968035200691_6.55747973454548-2 chr13 93764851 93765256 + 6.55747973454548 NA Intergenic Intergenic -6626 NM_009712 11881 Mm.300178 NM_009712 ENSMUSG00000042082 Arsb 1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B protein-coding unique_peak2_42_402_-0.608908858274017_8.35018159939096_6.55548051404746 chr4 149703808 149705986 + 6.55548051404746 NA Intergenic B1_Mus2|SINE|Alu -3268 NM_001029837 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_42_402_-0.608908858274017_8.35018159939096_6.55548051404746 chr16 49772977 49773820 + 6.55548051404746 NA Intergenic Intergenic 74104 NM_028680 73916 Mm.241276 NM_028680 ENSMUSG00000032965 Ift57 4833420A15Rik|Esrrbl1|Hippi|MHS4R2 intraflagellar transport 57 protein-coding common_peak1_247_1920_0.238877334627848_11.0270804709795_6.55287982680121 chr17 46555193 46557156 + 6.55287982680121 NA promoter-TSS (NM_020493) promoter-TSS (NM_020493) -12 NM_020493 20807 Mm.45044 NM_020493 ENSMUSG00000015605 Srf AW049942|AW240594 serum response factor protein-coding common_peak1_138_875_0.347197721191428_9.94838592019689_6.55225672455325 chr11 80428533 80429736 + 6.55225672455325 NA intron (NM_178616, intron 1 of 13) CpG 519 NM_178616 69077 Mm.260539 NM_178616 ENSMUSG00000017428 Psmd11 1700089D09Rik|1810019E17Rik|2610024G20Rik|2810055C24Rik|C78232|P44.5|S9 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 protein-coding common_peak2_148_963_0.33203566587766_10.0789071691688_6.55181963968248 chr3 146812046 146813727 + 6.55181963968248 NA promoter-TSS (NM_011100) promoter-TSS (NM_011100) 60 NM_011100 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak1_140_1404_-0.309088811528985_10.3018100093438_6.55005632929025-2 chr13 76017966 76019399 + 6.55005632929025 NA promoter-TSS (NM_001131068) promoter-TSS (NM_001131068) 30 NM_001131069 218341 Mm.266515 NM_178916 ENSMUSG00000043190 Rfesd AI256775|D030068K09 Rieske (Fe-S) domain containing protein-coding common_peak1_140_1404_-0.309088811528985_10.3018100093438_6.55005632929025 chr13 3609840 3611292 + 6.55005632929025 NA intron (NM_134063, intron 1 of 19) CpG 542 NM_134063 105203 Mm.221609 NM_134063 ENSMUSG00000033799 Fam208b AI645998|Pap20|mKIAA2006 family with sequence similarity 208, member B protein-coding common_peak2_43_161_0.746560050995683_7.71313002838247_6.54946693559063 chr13 54468160 54468907 + 6.54946693559063 NA intron (NM_028597, intron 1 of 5) CpG 307 NM_028597 73666 Mm.292487 NM_028597 ENSMUSG00000025872 Thoc3 2410044K02Rik|AL033344 THO complex 3 protein-coding common_peak2_171_1750_-0.275011575806895_10.6364575805301_6.54626770308798 chr6 83505626 83507801 + 6.54626770308798 NA intron (NM_001162521, intron 1 of 5) CpG 256 NM_013764 27369 Mm.42234 NM_013764 ENSMUSG00000014554 Dguok dGK|dGK1|dGK2|dGK3 deoxyguanosine kinase protein-coding common_peak1_13_144_-1.11995665118336_6.61993076442325_6.54597165562219 chr16 36071176 36071511 + 6.54597165562219 NA promoter-TSS (NM_001159421) promoter-TSS (NM_001159421) 172 NM_027342 70186 Mm.212991 NM_027342 ENSMUSG00000003955 Fam162a 2310056P07Rik|HGTD-P family with sequence similarity 162, member A protein-coding common_peak1_139_884_0.345136691925886_9.9621019909333_6.5448707726872 chr8 123211900 123213314 + 6.5448707726872 NA promoter-TSS (NM_177279) promoter-TSS (NM_177279) 181 NM_145606 234852 Mm.41596 NM_145606 ENSMUSG00000000743 Chmp1a 2900018H07Rik|Pcoln3 charged multivesicular body protein 1A protein-coding unique_peak1_16_29_1.49664566536565_5.65521342829135_6.54144707378459-3 chr4 139581481 139581921 + 6.54144707378459 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 6981 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak1_16_29_1.49664566536565_5.65521342829135_6.54144707378459 chr10 61294589 61295041 + 6.54144707378459 NA Intergenic Intergenic -3021 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding unique_peak1_16_29_1.49664566536565_5.65521342829135_6.54144707378459 chr19 40668165 40668554 + 6.54144707378459 NA intron (NM_009848, intron 1 of 9) B3|SINE|B2 8589 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding unique_peak1_16_29_1.49664566536565_5.65521342829135_6.54144707378459-4 chr7 24237349 24237859 + 6.54144707378459 NA promoter-TSS (NM_020262) promoter-TSS (NM_020262) -6 NM_020262 56869 Mm.103751 NM_020262 ENSMUSG00000074283 Zfp109 - zinc finger protein 109 protein-coding unique_peak1_16_29_1.49664566536565_5.65521342829135_6.54144707378459-5 chr9 70284925 70285455 + 6.54144707378459 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 77840 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak1_16_29_1.49664566536565_5.65521342829135_6.54144707378459-2 chr2 60864840 60865239 + 6.54144707378459 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 16399 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak2_6_85_-1.59292462705688_5.62980244117366_6.54144707378459 chr10 120628311 120629104 + 6.54144707378459 NA Intergenic Intergenic -137025 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak2_182_1875_-0.26479014531512_10.7410490398578_6.54077077001564 chr7 98655409 98657548 + 6.54077077001564 NA promoter-TSS (NM_172280) promoter-TSS (NM_172280) 91 NM_172280 233545 Mm.387819 NM_172280 ENSMUSG00000035401 Emsy 2210018M11Rik|2310016L09Rik|AU019521|AU019557 EMSY, BRCA2-interacting transcriptional repressor protein-coding unique_peak1_19_40_1.33358222301269_6.02434311612443_6.53989981586072 chr10 39507746 39508291 + 6.53989981586072 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) -104916 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding unique_peak1_19_40_1.33358222301269_6.02434311612443_6.53989981586072-2 chr2 18608172 18608661 + 6.53989981586072 NA Intergenic Intergenic -64046 NM_147778 12238 Mm.249586 NM_147778 ENSMUSG00000051154 Commd3 AW550818|Bup|D2Ertd542e COMM domain containing 3 protein-coding common_peak1_19_40_1.33358222301269_6.02434311612443_6.53989981586072 chr15 74708416 74708911 + 6.53989981586072 NA promoter-TSS (NR_033197) promoter-TSS (NR_033197) -498 NR_033197 66769 Mm.482908 NM_025756 ENSMUSG00000044276 4933427E11Rik - RIKEN cDNA 4933427E11 gene ncRNA unique_peak1_19_40_1.33358222301269_6.02434311612443_6.53989981586072-4 chr9 22122830 22123406 + 6.53989981586072 NA intron (NR_030448, intron 3 of 4) ZP3AR|Satellite|Satellite 7480 NM_007388 11433 Mm.46354 NM_007388 ENSMUSG00000001348 Acp5 TRACP|TRAP acid phosphatase 5, tartrate resistant protein-coding unique_peak1_19_40_1.33358222301269_6.02434311612443_6.53989981586072-3 chr4 65604894 65605353 + 6.53989981586072 NA intron (NM_001161782, intron 1 of 1) CpG 137 NM_001161782 69807 Mm.22786 NM_053084 ENSMUSG00000051675 Trim32 1810045E12Rik|3f3|BBS11|Zfp117 tripartite motif-containing 32 protein-coding common_peak1_312_2614_0.20584796485991_11.4555192135643_6.53935016036145 chr13 30972683 30974730 + 6.53935016036145 NA intron (NM_025588, intron 1 of 27) intron (NM_025588, intron 1 of 27) 341 NM_025588 66482 Mm.293510 NM_025588 ENSMUSG00000021357 Exoc2 2410030I24Rik|AI648199|Sec5|Sec5l1 exocyst complex component 2 protein-coding common_peak2_91_883_-0.396217132925209_9.58979399292883_6.53736432507669 chr6 48085401 48086683 + 6.53736432507669 NA intron (NM_001163475, intron 1 of 6) CpG 551 NM_001163475 69228 Mm.207555 NM_001163475 ENSMUSG00000057691 Zfp746 2810407L07Rik|AI317225|Znf746 zinc finger protein 746 protein-coding common_peak1_101_567_0.424535968809131_9.36201510390925_6.53647711325761 chr2 33467806 33468683 + 6.53647711325761 NA intron (NM_027947, intron 1 of 3) CpG 288 NM_027947 71834 Mm.44186 NM_027947 ENSMUSG00000026788 Zbtb43 1700010E06Rik|Zfp297b|mKIAA0414 zinc finger and BTB domain containing 43 protein-coding common_peak1_97_536_0.434710270111628_9.28613341304123_6.53629253315915 chr1 156718340 156719205 + 6.53629253315915 NA intron (NM_145413, intron 1 of 7) CpG 138 NM_145413 215015 Mm.229107 NM_145413 ENSMUSG00000033557 Fam20b C530043G21Rik|mKIAA0475 family with sequence similarity 20, member B protein-coding common_peak2_172_1182_0.30097617315276_10.3587224449162_6.5350619675438 chr5 115326155 115328443 + 6.5350619675438 NA non-coding (NR_036616, exon 1 of 5) non-coding (NR_036616, exon 1 of 5) 122 NR_036616 108014 Mm.287826 NM_025573 ENSMUSG00000029538 Srsf9 25kDa|2610029M16Rik|SRp30c|Sfrs9 serine/arginine-rich splicing factor 9 protein-coding common_peak2_72_691_-0.452309201251097_9.20847362701118_6.53472902548555 chr1 75316379 75317837 + 6.53472902548555 NA promoter-TSS (NM_016878) promoter-TSS (NM_016878) -91 NM_016878 13437 Mm.24680 NM_016878 ENSMUSG00000026209 Dnpep AA407814 aspartyl aminopeptidase protein-coding common_peak1_48_458_-0.565474106503123_8.55961329016225_6.53316369579686 chr13 41373131 41373712 + 6.53316369579686 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -14420 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding unique_peak2_48_458_-0.565474106503123_8.55961329016225_6.53316369579686 chr7 41498795 41500526 + 6.53316369579686 NA 5' UTR (NM_001033530, exon 1 of 4) 5' UTR (NM_001033530, exon 1 of 4) 230 NM_001033530 101835 Mm.370336 NM_001033530 ENSMUSG00000074166 AW146154 AI451288 expressed sequence AW146154 protein-coding common_peak2_135_1349_-0.315370497404952_10.2410584432357_6.53114862131955 chr18 79292796 79295806 + 6.53114862131955 NA Intergenic Intergenic -184910 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak2_36_347_-0.663159844637319_8.11136357353007_6.53076067818182 chr4 129623438 129624488 + 6.53076067818182 NA promoter-TSS (NM_025455) promoter-TSS (NM_025455) -55 NM_025455 66264 Mm.383215 NM_025455 ENSMUSG00000028795 Ccdc28b 1110002E08Rik|1810010N17Rik coiled coil domain containing 28B protein-coding common_peak1_42_155_0.760324951391702_7.6655646945581_6.52977246602494 chr4 15944847 15945772 + 6.52977246602494 NA exon (NM_026172, exon 1 of 10) exon (NM_026172, exon 1 of 10) 198 NM_026172 67460 Mm.393293 NM_026172 ENSMUSG00000028223 Decr1 1200012F07Rik|Decr|Nadph 2,4-dienoyl CoA reductase 1, mitochondrial protein-coding common_peak1_152_1000_0.324579034444747_10.1295157760584_6.52963399209047 chr4 45341786 45343161 + 6.52963399209047 NA exon (NM_153167, exon 1 of 7) exon (NM_153167, exon 1 of 7) 372 NM_153167 242418 Mm.317668 NM_153167 ENSMUSG00000035572 Dcaf10 AA959934|Wdr32 DDB1 and CUL4 associated factor 10 protein-coding common_peak2_54_228_0.642087230288972_8.16024740324143_6.52909406917371 chr2 68381762 68383470 + 6.52909406917371 NA intron (NM_016866, intron 5 of 17) intron (NM_016866, intron 5 of 17) 89365 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding common_peak1_65_301_0.565527519522158_8.52116849908616_6.52904956342714 chr3 116807764 116808855 + 6.52904956342714 NA promoter-TSS (NM_001081326) promoter-TSS (NM_001081326) -143 NM_001081326 77559 Mm.237099 NM_001081326 ENSMUSG00000033400 Agl 1110061O17Rik|9430004C13Rik|9630046L06Rik|AI850929|C77197 amylo-1,6-glucosidase, 4-alpha-glucanotransferase protein-coding common_peak2_122_1208_-0.334020748030413_10.0725881552339_6.52767066254908 chr17 34980774 34982868 + 6.52767066254908 NA promoter-TSS (NM_030597) promoter-TSS (NM_030597) -33 NM_001110101 27756 Mm.165735 NM_030597 ENSMUSG00000007050 Lsm2 D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_99_965_-0.376639564326679_9.72755959667244_6.52422881856197 chr10 61694717 61696699 + 6.52422881856197 NA exon (NM_027912, exon 1 of 4) exon (NM_027912, exon 1 of 4) 122 NR_073587 71767 Mm.71514 NM_027912 ENSMUSG00000020087 Tysnd1 1300019N10Rik trypsin domain containing 1 protein-coding unique_peak2_24_239_-0.820875403472135_7.49645289387245_6.5239428367169 chr9 110733604 110735090 + 6.5239428367169 NA intron (NM_001083936, intron 1 of 13) intron (NM_001083936, intron 1 of 13) 8263 NM_001083936 19228 Mm.3542 NM_011199 ENSMUSG00000032492 Pth1r PPR|Pthr|Pthr1 parathyroid hormone 1 receptor protein-coding common_peak1_24_239_-0.820875403472135_7.49645289387245_6.5239428367169 chr15 97458146 97458768 + 6.5239428367169 NA Intergenic Lx8|LINE|L1 -211170 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_68_651_-0.466132833984283_9.11566173723894_6.52309575788026 chr1 173630475 173631526 + 6.52309575788026 NA 5' UTR (NM_175026, exon 1 of 7) 5' UTR (NM_175026, exon 1 of 7) 141 NM_175026 236312 Mm.447 NM_175026 ENSMUSG00000043263 Ifi209 4930422C14|AI447904|Ifix|Pyhin-1|Pyhin1 interferon activated gene 209 protein-coding common_peak1_68_651_-0.466132833984283_9.11566173723894_6.52309575788026-2 chr13 48512702 48513521 + 6.52309575788026 NA intron (NM_001164575, intron 1 of 4) intron (NM_001164575, intron 1 of 4) 299 NM_001164575 67911 Mm.251375 NM_026450 ENSMUSG00000050954 Zfp169 1700025J14Rik|4930429A13Rik|BE688704 zinc finger protein 169 protein-coding common_peak1_17_178_-0.979130415391589_6.99425056956846_6.52226262082976-2 chrX 151016926 151017356 + 6.52226262082976 NA intron (NM_001168600, intron 1 of 15) intron (NM_001168600, intron 1 of 15) 152 NM_001168600 237107 Mm.45987 NM_198110 ENSMUSG00000025266 Gnl3l BC020354 guanine nucleotide binding protein-like 3 (nucleolar)-like protein-coding common_peak1_17_178_-0.979130415391589_6.99425056956846_6.52226262082976 chr3 95588903 95589213 + 6.52226262082976 NA exon (NM_001177670, exon 1 of 6) exon (NM_001177670, exon 1 of 6) 124 NM_001177670 229593 Mm.245830 NM_146133 ENSMUSG00000046519 Golph3l 2010204I15Rik|AU015439|AW549227|C77637|Gpp34r golgi phosphoprotein 3-like protein-coding common_peak1_147_1480_-0.299347651704723_10.3826820994365_6.5221320576825 chr8 71462727 71464744 + 6.5221320576825 NA promoter-TSS (NM_022419) promoter-TSS (NM_022419) -78 NM_022419 64296 Mm.276383 NM_022419 ENSMUSG00000007950 Abhd8 0910001L24Rik|AB030191 abhydrolase domain containing 8 protein-coding unique_peak2_12_135_-1.15865390779576_6.50813588735246_6.52089784241762-2 chr17 87375533 87376453 + 6.52089784241762 NA intron (NM_028639, intron 19 of 19) intron (NM_028639, intron 19 of 19) 51748 NM_029298 75467 Mm.50108 NM_029298 ENSMUSG00000036557 Stpg4 1700011E24Rik|GSE sperm tail PG rich repeat containing 4 protein-coding common_peak1_12_135_-1.15865390779576_6.50813588735246_6.52089784241762-2 chr7 80766569 80766952 + 6.52089784241762 NA intron (NM_016721, intron 4 of 37) intron (NM_016721, intron 4 of 37) 36571 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding unique_peak2_12_135_-1.15865390779576_6.50813588735246_6.52089784241762 chr15 76368694 76369434 + 6.52089784241762 NA exon (NM_021555, exon 1 of 6) exon (NM_021555, exon 1 of 6) 166 NM_021555 59053 Mm.133202 NM_021555 ENSMUSG00000022554 Hgh1 Brp16|D15Ertd741e|Fam203a|MNCb-5873 HGH1 homolog protein-coding common_peak1_12_135_-1.15865390779576_6.50813588735246_6.52089784241762 chr11 83665464 83665818 + 6.52089784241762 NA TTS (NM_013652) TTS (NM_013652) 3057 NM_013652 20303 Mm.244263 NM_013652 ENSMUSG00000018930 Ccl4 AT744.1|Act-2|MIP-1B|Mip1b|Scya4 chemokine (C-C motif) ligand 4 protein-coding common_peak2_103_1007_-0.368634056486272_9.79296289525678_6.52068069422864 chr1 60097298 60099212 + 6.52068069422864 NA promoter-TSS (NM_001285463) promoter-TSS (NM_001285463) 8 NM_139150 241066 Mm.276441 NM_139150 ENSMUSG00000026017 Carf Als2cr8|ECBRC-FC1|ECBRC-FC2 calcium response factor protein-coding common_peak2_44_420_-0.591497785501764_8.42192753031551_6.51972579900764 chr5 146828842 146830452 + 6.51972579900764 NA Intergenic Intergenic -3243 NM_019647 19933 Mm.316592 NM_019647 ENSMUSG00000041453 Rpl21 8430440E03Rik|L21 ribosomal protein L21 protein-coding common_peak2_138_1381_-0.310557119595657_10.2772633405904_6.5174197388714 chr10 88419353 88422164 + 6.5174197388714 NA intron (NM_001004164, intron 7 of 20) intron (NM_001004164, intron 7 of 20) -38829 NM_011517 20962 Mm.297977 NM_011517 ENSMUSG00000020059 Sycp3 Cor1|Scp3 synaptonemal complex protein 3 protein-coding common_peak1_22_53_1.18357330193004_6.34667415312849_6.51702949312208 chr8 124232665 124233088 + 6.51702949312208 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 1482 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_378_3361_0.181927350651838_11.8060676845621_6.51569474627056 chr7 43427794 43432592 + 6.51569474627056 NA promoter-TSS (NM_177693) promoter-TSS (NM_177693) 92 NM_177693 233187 Mm.267027 NM_177693 ENSMUSG00000004613 Lim2 19kDa|4833403J20|MP19|To3 lens intrinsic membrane protein 2 protein-coding common_peak1_247_1921_0.238126517519625_11.0274558795336_6.51536931004768 chr4 41313731 41315143 + 6.51536931004768 NA intron (NM_026893, intron 1 of 8) CpG 464 NM_026893 68970 Mm.28891 NM_026893 ENSMUSG00000028436 Dcaf12 1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a DDB1 and CUL4 associated factor 12 protein-coding common_peak2_157_1045_0.318044266052731_10.1896892692733_6.51478609720586 chr4 45341528 45343279 + 6.51478609720586 NA exon (NM_153167, exon 1 of 7) exon (NM_153167, exon 1 of 7) 302 NM_153167 242418 Mm.317668 NM_153167 ENSMUSG00000035572 Dcaf10 AA959934|Wdr32 DDB1 and CUL4 associated factor 10 protein-coding unique_peak1_23_57_1.15579447296452_6.43587823160983_6.51414096656716 chr17 45320273 45320690 + 6.51414096656716 NA Intergenic Intergenic 113226 NM_152810 71702 Mm.28270 NM_152810 ENSMUSG00000023932 Cdc5l 1200002I02Rik|AA408004|PCDC5RP cell division cycle 5-like (S. pombe) protein-coding common_peak1_26_256_-0.783416982354284_7.61391605801674_6.51307895089793 chr11 87964838 87965396 + 6.51307895089793 NA Intergenic Intergenic 21468 NM_001168472 68097 Mm.246436 NM_026556 ENSMUSG00000020483 Dynll2 1700064A15Rik|6720463E02Rik|C87222|DLC8|DLC8b|Dlc2 dynein light chain LC8-type 2 protein-coding common_peak2_144_929_0.335681995395495_10.0289279036931_6.51306449198973 chr11 4848510 4850255 + 6.51306449198973 NA 5' UTR (NM_010898, exon 1 of 16) 5' UTR (NM_010898, exon 1 of 16) 162 NM_001252250 18016 Mm.297109 NM_010898 ENSMUSG00000009073 Nf2 merlin neurofibromin 2 protein-coding common_peak1_64_612_-0.482828743357885_9.01832889201184_6.51289563220039 chr10 127030244 127030997 + 6.51289563220039 NA exon (NM_025537, exon 2 of 6) exon (NM_025537, exon 2 of 6) 194 NM_025537 66399 Mm.29900 NM_025537 ENSMUSG00000040521 Tsfm 2310050B20Rik|9430024O13Rik|EF-TS|EF-Tsmt Ts translation elongation factor, mitochondrial protein-coding common_peak2_78_750_-0.430570006400956_9.33738409431379_6.51233261625826 chr5 130028767 130030067 + 6.51233261625826 NA intron (NM_007761, intron 1 of 5) CpG 111 NM_007761 12909 Mm.18072 NM_007761 ENSMUSG00000025532 Crcp AL022669 calcitonin gene-related peptide-receptor component protein protein-coding common_peak1_56_241_0.625635482275579_8.23168097841238_6.5115689778553 chr9 98986292 98987189 + 6.5115689778553 NA intron (NM_011810, intron 1 of 4) CpG 367 NM_011810 23873 Mm.74605 NM_011810 ENSMUSG00000032463 Faim - Fas apoptotic inhibitory molecule protein-coding common_peak1_102_576_0.419120375131257_9.38198769621111_6.51139577701096 chr1 80382793 80384442 + 6.51139577701096 NA Intergenic Intergenic -42927 NM_016716 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding common_peak1_168_1715_-0.277019988970135_10.6063238430145_6.51080176956027 chr3 69204405 69205922 + 6.51080176956027 NA Intergenic Intergenic -17256 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding common_peak1_104_1017_-0.365941615398876_9.80855103837626_6.50966172475363 chr2 160952580 160954232 + 6.50966172475363 NA intron (NM_173368, intron 36 of 36) intron (NM_173368, intron 36 of 36) -41067 NM_182840 280635 Mm.330747 NM_182840 ENSMUSG00000050700 Emilin3 1110013O17Rik|EMILIN-3|EMILIN-5|EMILIN-T|Emilin5 elastin microfibril interfacer 3 protein-coding common_peak1_72_350_0.526991806081067_8.71882312334509_6.5091407639234 chr11 57962129 57963186 + 6.5091407639234 NA Intergenic Intergenic -46407 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding unique_peak2_15_161_-1.04359673975946_6.8180516330049_6.50903719730669 chr16 31080715 31081675 + 6.50903719730669 NA exon (NM_198626, exon 1 of 4) exon (NM_198626, exon 1 of 4) 237 NM_198626 268880 Mm.286693 NM_198626 ENSMUSG00000047434 Xxylt1 AI480653 xyloside xylosyltransferase 1 protein-coding common_peak1_15_161_-1.04359673975946_6.8180516330049_6.50903719730669 chr9 111046004 111046376 + 6.50903719730669 NA Intergenic Intergenic 11054 NM_001302377 54199 Mm.7336 NM_017466 ENSMUSG00000043953 Ccrl2 1810047I05Rik|Ackr5|CCR11|Cmkbr1l2|E01|L-CCR chemokine (C-C motif) receptor-like 2 protein-coding unique_peak2_15_161_-1.04359673975946_6.8180516330049_6.50903719730669-2 chr8 70543837 70545154 + 6.50903719730669 NA intron (NM_007924, intron 1 of 11) intron (NM_007924, intron 1 of 11) 4820 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding unique_peak2_33_319_-0.691779522726835_7.97603833352394_6.50786254139802 chr3 51269668 51271873 + 6.50786254139802 NA intron (NM_001291059, intron 4 of 9) intron (NM_001291059, intron 4 of 9) -5991 NR_073429 67746 Mm.441177 NR_073429 ENSMUSG00000087440 4930577N17Rik - RIKEN cDNA 4930577N17 gene ncRNA common_peak1_172_1760_-0.272968662338659_10.6456948626619_6.50732540683299 chr19 21713005 21714939 + 6.50732540683299 NA Intergenic RLTR20D|LTR|ERVK 60663 NM_146096 226016 Mm.28796 NM_146096 ENSMUSG00000047368 Abhd17b 5730446C15Rik|Cgi67|Fam108b|Fam108b1 abhydrolase domain containing 17B protein-coding common_peak1_81_780_-0.421123161890197_9.39861715719688_6.50562010608954 chr14 63543314 63544406 + 6.50562010608954 NA promoter-TSS (NM_177594) promoter-TSS (NM_177594) 93 NM_177594 210376 Mm.441613 NM_177594 ENSMUSG00000035078 Mtmr9 9430075G12Rik|AA516943|AF073881|LIP-STYX|MTMR8|mMTMH3 myotubularin related protein 9 protein-coding common_peak2_50_477_-0.553196030853291_8.6242687925541_6.50373807934279 chr5 143547871 143549470 + 6.50373807934279 NA promoter-TSS (NM_026050) promoter-TSS (NM_026050) -36 NM_133703 67238 Mm.383219 NM_026050 ENSMUSG00000083012 Fam220a 1500026F15Rik|2810453I06Rik|AW047776|Acpin1|Sipar family with sequence similarity 220, member A protein-coding common_peak1_114_1122_-0.346575821428772_9.95985430168622_6.50213222815572 chr9 119894797 119895505 + 6.50213222815572 NA intron (NM_026236, intron 1 of 18) CpG 256 NM_026236 67561 Mm.104789 NM_026236 ENSMUSG00000032512 Wdr48 8430408H12Rik|Uaf1|mKIAA1449 WD repeat domain 48 protein-coding common_peak2_57_543_-0.512187215551414_8.83136923347463_6.5005677809589 chr2 121456387 121457878 + 6.5005677809589 NA promoter-TSS (NM_001025371) promoter-TSS (NM_001025371) 44 NM_026318 67693 Mm.330525 NM_026318 ENSMUSG00000027245 Hypk 2310003F16Rik|HSPC136 huntingtin interacting protein K protein-coding common_peak2_107_616_0.406305510062889_9.47227943418086_6.50048186446681 chr17 71194772 71197434 + 6.50048186446681 NA intron (NM_022882, intron 1 of 19) intron (NM_022882, intron 1 of 19) -8551 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding unique_peak2_45_173_0.722129619431137_7.8040083055643_6.50030563150874 chr17 52156021 52157295 + 6.50030563150874 NA Intergenic ORR1A0|LTR|ERVL-MaLR 273931 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA common_peak2_202_1469_0.270598984054311_10.6568999317509_6.50010209309379 chr7 5019526 5021738 + 6.50010209309379 NA 5' UTR (NM_001033383, exon 1 of 3) 5' UTR (NM_001033383, exon 1 of 3) 256 NM_001033383 319748 Mm.86607 NM_001033383 ENSMUSG00000074405 Zfp865 6430526N21Rik|Znf865 zinc finger protein 865 protein-coding common_peak1_25_248_-0.804580687427149_7.55771158835451_6.49971636090214 chr17 29552576 29553020 + 6.49971636090214 NA intron (NM_198647, intron 1 of 12) B2_Mm2|SINE|B2 2996 NM_198647 381085 Mm.328934 NM_198647 ENSMUSG00000042203 Tbc1d22b BC045600 TBC1 domain family, member 22B protein-coding common_peak2_25_248_-0.804580687427149_7.55771158835451_6.49971636090214 chr11 33706970 33708007 + 6.49971636090214 NA intron (NM_001190885, intron 1 of 8) RMER17C|LTR|ERVK -128531 NM_146017 216643 Mm.99989 NM_146017 ENSMUSG00000020159 Gabrp - gamma-aminobutyric acid (GABA) A receptor, pi protein-coding common_peak1_27_265_-0.768717685483264_7.67092359275956_6.49948975993389 chr15 72928742 72929195 + 6.49948975993389 NA intron (NM_001164641, intron 15 of 17) intron (NM_001164641, intron 15 of 17) -118644 NR_002864 353342 Mm.440245 NR_002864 ENSMUSG00000106847 Peg13 - paternally expressed 13 ncRNA common_peak2_70_336_0.536554764665159_8.66488216351444_6.49829817919837 chr11 80377342 80378762 + 6.49829817919837 NA promoter-TSS (NM_027472) promoter-TSS (NM_027472) -37 NM_027472 70591 Mm.86860 NM_027472 ENSMUSG00000057181 5730455P16Rik - RIKEN cDNA 5730455P16 gene protein-coding common_peak1_32_310_-0.703450822469724_7.92904535889574_6.49785539676922 chrX 71367292 71367787 + 6.49785539676922 NA intron (NM_001313706, intron 1 of 15) intron (NM_001313706, intron 1 of 15) 2779 NM_001313706 53332 Mm.219672 NM_016985 ENSMUSG00000015214 Mtmr1 AW049210 myotubularin related protein 1 protein-coding common_peak2_138_876_0.345551748347869_9.94920890661867_6.49679890811787 chr4 53158446 53160198 + 6.49679890811787 NA intron (NM_013454, intron 1 of 49) intron (NM_013454, intron 1 of 49) 573 NM_013454 11303 Mm.277376 NM_013454 ENSMUSG00000015243 Abca1 ABC-1|Abc1 ATP-binding cassette, sub-family A (ABC1), member 1 protein-coding common_peak2_75_371_0.514430014661572_8.79637381843882_6.49670038318545 chr11 57961970 57963300 + 6.49670038318545 NA Intergenic Intergenic -46429 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_52_495_-0.538454544943763_8.68496903791499_6.49647514029292 chr5 34513254 34514718 + 6.49647514029292 NA promoter-TSS (NM_139064) promoter-TSS (NM_139064) -7 NM_139064 231130 Mm.28615 NM_139064 ENSMUSG00000059866 Tnip2 1810020H16Rik|ABIN-2|AI428870 TNFAIP3 interacting protein 2 protein-coding common_peak1_52_495_-0.538454544943763_8.68496903791499_6.49647514029292-2 chr8 107048116 107049086 + 6.49647514029292 NA promoter-TSS (NM_026513) promoter-TSS (NM_026513) 13 NM_026513 68023 Mm.482335 NM_026513 ENSMUSG00000078931 Pdf 2610019N19Rik peptide deformylase (mitochondrial) protein-coding common_peak1_52_495_-0.538454544943763_8.68496903791499_6.49647514029292 chr11 32587163 32588258 + 6.49647514029292 NA intron (NM_009288, intron 5 of 18) intron (NM_009288, intron 5 of 18) 54444 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_35_116_0.860932953475618_7.30083119632121_6.49257710323686 chr16 24909058 24909814 + 6.49257710323686 NA intron (NM_001145952, intron 9 of 11) ORR1C1|LTR|ERVL-MaLR -150203 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak2_21_212_-0.874911877531887_7.29725368145989_6.49257710323686 chr11 120712966 120713797 + 6.49257710323686 NA promoter-TSS (NM_153545) promoter-TSS (NM_153545) 386 NM_016665 20892 Mm.259716 NM_016665 ENSMUSG00000025144 Cenpx Stra13 centromere protein X protein-coding common_peak1_21_212_-0.874911877531887_7.29725368145989_6.49257710323686 chr18 23989082 23989613 + 6.49257710323686 NA promoter-TSS (NM_011755) promoter-TSS (NM_011755) -287 NM_011755 22694 Mm.290596 NM_011755 ENSMUSG00000063281 Zfp35 Zfp-35|Znf271|mszf13|mszf20-1|mszf28|mszf68 zinc finger protein 35 protein-coding common_peak1_31_301_-0.715539165013555_7.8806351568183_6.4908292780985 chr9 103230302 103230975 + 6.4908292780985 NA promoter-TSS (NM_133977) promoter-TSS (NM_133977) -352 NM_133977 22041 Mm.37214 NM_133977 ENSMUSG00000032554 Trf AI266983|Cd176|HP|Tf|Tfn|hpx transferrin protein-coding common_peak2_66_308_0.559080672245349_8.55100336402705_6.48950038883095 chr15 51876914 51878218 + 6.48950038883095 NA exon (NM_030132, exon 1 of 3) exon (NM_030132, exon 1 of 3) 125 NM_030132 78581 Mm.176347 NM_030132 ENSMUSG00000022313 Utp23 1700010I21Rik|AI662478|BB238373|D530033C11Rik UTP23 small subunit processome component protein-coding common_peak1_115_1133_-0.345316988056947_9.97454643091375_6.48913435843708 chr16 36071585 36072273 + 6.48913435843708 NA promoter-TSS (NM_027342) promoter-TSS (NM_027342) 269 NM_001159421 381045 Mm.310434 NM_198645 ENSMUSG00000075229 Ccdc58 A930007B11Rik|AI413631 coiled-coil domain containing 58 protein-coding common_peak2_106_1037_-0.360620309002108_9.83928057385683_6.48901831358849 chr9 53246870 53248904 + 6.48901831358849 NA exon (NM_029936, exon 1 of 18) exon (NM_029936, exon 1 of 18) 225 NM_029936 77591 Mm.133560 NM_029936 ENSMUSG00000053289 Ddx10 4632415A01Rik|AI646054 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 protein-coding common_peak1_106_1037_-0.360620309002108_9.83928057385683_6.48901831358849 chr9 101034199 101035438 + 6.48901831358849 NA promoter-TSS (NM_025835) promoter-TSS (NM_025835) 66 NM_001311149 66904 Mm.335385 NM_025835 ENSMUSG00000032527 Pccb 1300012P06Rik|AI314687|R74805 propionyl Coenzyme A carboxylase, beta polypeptide protein-coding common_peak2_269_2909_-0.209877972891375_11.40186445135_6.48860052783283 chr10 42859138 42864364 + 6.48860052783283 NA intron (NM_172938, intron 1 of 8) intron (NM_172938, intron 1 of 8) 1239 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak2_83_430_0.479155207082112_8.99112166263015_6.48826519079145 chr16 33683955 33686105 + 6.48826519079145 NA intron (NM_175256, intron 1 of 14) intron (NM_175256, intron 1 of 14) 564 NM_175256 77446 Mm.245741 NM_172934 ENSMUSG00000075254 Heg1 4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629|OTTMUSG00000027315 heart development protein with EGF-like domains 1 protein-coding unique_peak2_7_93_-1.48494789973883_5.81211490180822_6.48796427853575 chr2 125735455 125736161 + 6.48796427853575 NA Intergenic Tigger1|DNA|TcMar-Tigger -11660 NM_199022 271849 Mm.425101 NM_199022 ENSMUSG00000035109 Shc4 6230417E10Rik|9930029B02Rik|Gm685|RaLP SHC (Src homology 2 domain containing) family, member 4 protein-coding common_peak2_38_364_-0.638809204159519_8.19234805168762_6.48707365988489 chr19 5459810 5461202 + 6.48707365988489 NA promoter-TSS (NM_001253832) promoter-TSS (NM_001253832) -101 NM_001253832 58249 Mm.329656 NM_021438 ENSMUSG00000024911 Fibp 2010004G08Rik|2010005N21Rik|3010027N18Rik fibroblast growth factor (acidic) intracellular binding protein protein-coding unique_peak2_29_283_-0.741090686906978_7.77920177605119_6.48701040731531 chr9 61012482 61014194 + 6.48701040731531 NA Intergenic Intergenic -3731 NR_040767 330956 Mm.207985 NR_040767 ENSMUSG00000111290 Gm5122 A430102L10 predicted gene 5122 ncRNA common_peak2_43_411_-0.600090473302911_8.38645529053176_6.48690710804277 chr8 126757759 126759140 + 6.48690710804277 NA Intergenic Intergenic -165013 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_188_1334_0.28311964953015_10.52418385134_6.48475241925741 chr4 49631169 49632846 + 6.48475241925741 NA promoter-TSS (NM_001163263) promoter-TSS (NM_001163263) -53 NM_001163263 109331 Mm.24765 NM_182999 ENSMUSG00000028309 Rnf20 4833430L21Rik|AW540162|C79397|mKIAA4116 ring finger protein 20 protein-coding common_peak1_62_281_0.582057807552989_8.43058025617529_6.48385365766036 chr7 144553020 144553738 + 6.48385365766036 NA intron (NM_001033319, intron 1 of 30) CpG 350 NM_001033319 233977 Mm.490347 NM_001033319 ENSMUSG00000037519 Ppfia1 C030014K08Rik|C87158|LIP.1|LIP1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 protein-coding common_peak1_100_560_0.424991232996664_9.34435257710713_6.48374114958471 chr1 88007837 88008729 + 6.48374114958471 NA intron (NM_001033291, intron 1 of 27) CpG 268 NM_001198573 227334 Mm.80484 NM_001033291 ENSMUSG00000005501 Usp40 B230215L03Rik|C730029K03 ubiquitin specific peptidase 40 protein-coding common_peak1_74_710_-0.443556041329749_9.25192772895454_6.48335207494365 chr19 44931103 44931588 + 6.48335207494365 NA exon (NM_001081225, exon 1 of 20) exon (NM_001081225, exon 1 of 20) 226 NM_001081225 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Fam178a 3632432H19|6030443O07Rik|AU014917|Slf2 family with sequence similarity 178, member A protein-coding common_peak1_82_790_-0.418028015304444_9.41851987682057_6.48222102393855 chr6 120914307 120915478 + 6.48222102393855 NA intron (NM_007544, intron 1 of 5) intron (NM_007544, intron 1 of 5) 1928 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding common_peak1_187_1325_0.283490649686144_10.5146103849557_6.48194053927905 chr5 130221565 130223068 + 6.48194053927905 NA promoter-TSS (NM_027854) promoter-TSS (NM_027854) -19 NM_027854 71667 Mm.258508 NM_027854 ENSMUSG00000053094 Tmem248 0610007L01Rik|A930023A16Rik|AW557951|G430067H08Rik transmembrane protein 248 protein-coding common_peak1_88_851_-0.401691251461649_9.53386399449501_6.4803111621625 chr15 27783288 27784713 + 6.4803111621625 NA intron (NM_001081302, intron 34 of 56) intron (NM_001081302, intron 34 of 56) -102458 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak2_60_268_0.593057088490349_8.3679909068018_6.48017124043808 chr8 34142719 34144542 + 6.48017124043808 NA intron (NM_026609, intron 1 of 3) ID_B1|SINE|B4 3109 NM_026609 68192 Mm.34212 NM_026609 ENSMUSG00000031513 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 protein-coding common_peak1_49_467_-0.557737216260664_8.59149611145307_6.4797034262904 chr17 34196223 34197317 + 6.4797034262904 NA exon (NM_001161730, exon 12 of 12) exon (NM_001161730, exon 12 of 12) -1425 NM_010724 16913 Mm.180191 NM_010724 ENSMUSG00000024338 Psmb8 Lmp-7|Lmp7 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) protein-coding common_peak1_146_1469_-0.300589686659759_10.3713055963938_6.47867642909282 chr3 108839440 108840599 + 6.47867642909282 NA intron (NM_011504, intron 1 of 18) CpG 483 NM_011504 20912 Mm.316894 NM_011504 ENSMUSG00000027882 Stxbp3 Munc-18c|Stxbp3a|Sxtbp3|Unc18-3 syntaxin binding protein 3 protein-coding common_peak2_364_3201_0.185667020747692_11.7375911028901_6.47672685821831 chr17 53566091 53570898 + 6.47672685821831 NA intron (NM_020005, intron 1 of 17) intron (NM_020005, intron 1 of 17) 1523 NM_020005 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding common_peak1_46_439_-0.578228626098642_8.49224540047534_6.47555793448014 chr4 154964113 154964804 + 6.47555793448014 NA intron (NR_131230, intron 1 of 18) CpG 335 NR_131230 269614 Mm.30042 NM_172990 ENSMUSG00000029056 Pank4 D030031I12Rik|R75150 pantothenate kinase 4 protein-coding common_peak1_64_295_0.567461154703947_8.49318394298092_6.47555793448014 chr17 46649783 46651046 + 6.47555793448014 NA promoter-TSS (NM_025611) promoter-TSS (NM_025611) 76 NM_025611 66515 Mm.329078 NM_025611 ENSMUSG00000038545 Cul7 2510004L20Rik|AA409809|C230011P08Rik|p185|p193 cullin 7 protein-coding common_peak1_129_1283_-0.32290265560305_10.1649781593208_6.47429213204482 chr5 124424512 124425737 + 6.47429213204482 NA intron (NM_001081203, intron 1 of 31) CpG 790 NM_001081203 243272 Mm.23879 NM_001081203 ENSMUSG00000038095 Sbno1 9330180L10Rik|AI849128|AW557836|BC021875|Sbno|mSno1|sno strawberry notch homolog 1 (Drosophila) protein-coding common_peak2_44_167_0.733861214785871_7.7592480301717_6.47428447116436 chr9 56160288 56161113 + 6.47428447116436 NA intron (NM_019793, intron 1 of 6) CpG 370 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak2_114_673_0.389961609789971_9.59158558607684_6.47421656143768 chr1 164247970 164249797 + 6.47421656143768 NA promoter-TSS (NM_001276455) promoter-TSS (NM_001276455) -163 NM_054087 116914 Mm.35444 NM_054087 ENSMUSG00000040918 Slc19a2 AV276020|AW322295|DDA1|THTR1|TRMA solute carrier family 19 (thiamine transporter), member 2 protein-coding unique_peak2_5_76_-1.70623569497552_5.41366869320714_6.47093237648078-3 chr8 78622593 78623317 + 6.47093237648078 NA intron (NR_104094, intron 4 of 9) intron (NR_104094, intron 4 of 9) 113627 NM_001282108 76775 Mm.334631 NM_029736 ENSMUSG00000031684 Slc10a7 2410193C02Rik|P7 solute carrier family 10 (sodium/bile acid cotransporter family), member 7 protein-coding unique_peak2_5_76_-1.70623569497552_5.41366869320714_6.47093237648078-2 chr5 77459963 77460592 + 6.47093237648078 NA Intergenic Intergenic -5211 NR_131050 69370 Mm.426881 NR_131050 ENSMUSG00000107232 1700017L05Rik - RIKEN cDNA 1700017L05 gene ncRNA unique_peak2_5_76_-1.70623569497552_5.41366869320714_6.47093237648078 chr18 50023663 50024352 + 6.47093237648078 NA intron (NM_001177759, intron 1 of 1) intron (NM_001177759, intron 1 of 1) -29275 NM_134131 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding common_peak2_235_1799_0.244969836197502_10.9362661093158_6.46921246121153 chr8 46858099 46861450 + 6.46921246121153 NA Intergenic Intergenic 120029 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak2_40_144_0.781534175050491_7.57067617754018_6.46738228262017 chr15 76576211 76576911 + 6.46738228262017 NA intron (NR_073123, intron 1 of 14) intron (NR_073123, intron 1 of 14) 202 NR_073123 268822 Mm.181624 NM_172960 ENSMUSG00000022550 Adck5 A230108P17 aarF domain containing kinase 5 protein-coding common_peak1_13_19_1.73802434394421_5.19094026685947_6.46607301487866 chr1 128604674 128605032 + 6.46607301487866 NA Intergenic Intergenic -12554 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding unique_peak1_13_19_1.73802434394421_5.19094026685947_6.46607301487866 chr11 11744783 11745177 + 6.46607301487866 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 54803 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding unique_peak1_13_19_1.73802434394421_5.19094026685947_6.46607301487866-2 chr4 88167169 88167566 + 6.46607301487866 NA intron (NM_001081184, intron 5 of 43) B3|SINE|B2 45327 NR_030478 735282 NR_030478 ENSMUSG00000070077 Mir491 Mirn491|mir-491|mmu-mir-491 microRNA 491 ncRNA common_peak1_173_1771_-0.271752746702809_10.6552865152036_6.46504680547333 chr10 111996045 111997435 + 6.46504680547333 NA intron (NM_028608, intron 1 of 5) intron (NM_028608, intron 1 of 5) 524 NM_028608 73690 Mm.173790 NM_028608 ENSMUSG00000056888 Glipr1 2410114O14Rik|RTVP-1|RTVP1|mRTVP-1 GLI pathogenesis-related 1 (glioma) protein-coding common_peak1_47_185_0.701228968170421_7.88977329519324_6.46490030011294 chr1 53889147 53889971 + 6.46490030011294 NA intron (NM_001001883, intron 15 of 28) intron (NM_001001883, intron 15 of 28) 40135 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA common_peak1_151_1524_-0.294392390381653_10.4273973321468_6.46197541628837 chr10 58370471 58372134 + 6.46197541628837 NA promoter-TSS (NM_201242) promoter-TSS (NM_201242) -152 NM_201242 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak1_80_770_-0.424244966922156_9.37846456645396_6.46177080788277 chr12 75596390 75597019 + 6.46177080788277 NA promoter-TSS (NM_012024) promoter-TSS (NM_012024) -504 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak1_211_2210_-0.241516922000402_10.989724848816_6.46067596534308 chr8 26977124 26979693 + 6.46067596534308 NA intron (NM_001110508, intron 2 of 2) CpG-13923 1072 NM_001110508 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding common_peak2_83_800_-0.4149591662375_9.43817884928996_6.45977365273306 chrX 94796614 94798817 + 6.45977365273306 NA non-coding (NR_003292, exon 1 of 1) non-coding (NR_003292, exon 1 of 1) 574 NR_003292 668171 Mm.426134 NR_003292 Zxda 4933406P09Rik|AW413531 zinc finger, X-linked, duplicated A pseudo common_peak2_363_4098_-0.17548660954202_11.9133129698638_6.45910071442319 chr11 69365548 69370020 + 6.45910071442319 NA intron (NM_146019, intron 1 of 39) intron (NM_146019, intron 1 of 39) 1642 NM_146019 216848 Mm.178246 NM_146019 ENSMUSG00000018474 Chd3 2600010P09Rik|AF020312|Chd7|Prp7|Prp9-1 chromodomain helicase DNA binding protein 3 protein-coding common_peak2_141_1413_-0.305794547776026_10.3126691309214_6.45750401595295 chr4 150908695 150910720 + 6.45750401595295 NA intron (NM_020569, intron 1 of 6) CpG 214 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak1_66_630_-0.470952494832826_9.06601994756614_6.45704099559124 chr2 155826004 155826816 + 6.45704099559124 NA exon (NM_010579, exon 1 of 6) exon (NM_010579, exon 1 of 6) 515 NM_010579 16418 Mm.271674 NM_010579 ENSMUSG00000027613 Eif6 1110004P11|AA408895|CAB|Itgb4bp|eIF-6|imc-415|p27(BBP)|p27BBP eukaryotic translation initiation factor 6 protein-coding common_peak1_24_62_1.10873526863647_6.53164755781815_6.45483775259044-2 chr7 80500616 80501265 + 6.45483775259044 NA intron (NM_007550, intron 7 of 21) B3|SINE|B2 34058 NM_007550 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding common_peak1_24_62_1.10873526863647_6.53164755781815_6.45483775259044 chr11 115175597 115176036 + 6.45483775259044 NA intron (NM_012030, intron 1 of 5) intron (NM_012030, intron 1 of 5) 11500 NM_025400 66176 Mm.86823 NM_025400 ENSMUSG00000015542 Nat9 1110028N05Rik N-acetyltransferase 9 (GCN5-related, putative) protein-coding common_peak1_51_486_-0.545744406255054_8.65490575895481_6.45481426201817 chr7 45333343 45334065 + 6.45481426201817 NA promoter-TSS (NM_175130) promoter-TSS (NM_175130) 76 NM_175130 68667 Mm.439890 NM_175130 ENSMUSG00000038260 Trpm4 1110030C19Rik|AW047689|LTRPC4|LTrpC-4|TRPM4B transient receptor potential cation channel, subfamily M, member 4 protein-coding common_peak1_19_194_-0.916196086118834_7.14923227069019_6.45404301175092 chr2 165171247 165171758 + 6.45404301175092 NA intron (NM_174988, intron 2 of 11) B4|SINE|B4 63235 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding unique_peak2_10_118_-1.26163233180035_6.26400159740777_6.45268701619161 chr9 118357512 118358321 + 6.45268701619161 NA Intergenic Intergenic -71923 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak1_161_1083_0.310805352825364_10.2375517177666_6.45214955319765 chr16 4789295 4790809 + 6.45214955319765 NA promoter-TSS (NM_025670) promoter-TSS (NM_025670) -117 NM_025670 66626 Mm.157648 NM_025670 ENSMUSG00000004071 Cdip1 2700048O17Rik|5730403B10Rik|AU018521|AW742692|CDIP cell death inducing Trp53 target 1 protein-coding common_peak1_73_699_-0.444815149434563_9.22880353711505_6.45185229472278 chr1 95666969 95667707 + 6.45185229472278 NA 5' UTR (NM_009183, exon 1 of 5) 5' UTR (NM_009183, exon 1 of 5) 256 NM_009183 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak1_73_699_-0.444815149434563_9.22880353711505_6.45185229472278-2 chr2 25422344 25423340 + 6.45185229472278 NA promoter-TSS (NM_001177367) promoter-TSS (NM_001177367) -400 NM_001289453 14347 Mm.1203 NM_013524 ENSMUSG00000036587 Fut7 AI853193|FTVII|Fuc-TVII|FucT-VII fucosyltransferase 7 protein-coding common_peak2_94_514_0.440041168204631_9.2284492061729_6.45185229472278 chr11 86806856 86808287 + 6.45185229472278 NA promoter-TSS (NM_026191) promoter-TSS (NM_026191) 89 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding common_peak1_53_504_-0.531319699613206_8.71447972783255_6.45115708844137 chr14 55097157 55098283 + 6.45115708844137 NA 3' UTR (NM_153083, exon 2 of 2) 3' UTR (NM_153083, exon 2 of 2) 2936 NM_153083 105663 Mm.319204 NM_153083 ENSMUSG00000045691 Thtpa AW122966 thiamine triphosphatase protein-coding common_peak1_156_1579_-0.288233208658816_10.4815922387351_6.45029092100281 chr6 113045599 113047813 + 6.45029092100281 NA intron (NM_008188, intron 1 of 9) intron (NM_008188, intron 1 of 9) 379 NM_008188 14911 Mm.781 NM_008188 ENSMUSG00000030264 Thumpd3 AW556087|Gt(ROSA)26asSor|Gtrosa26as THUMP domain containing 3 protein-coding common_peak1_22_221_-0.855955062256596_7.36643833522181_6.44826545092254 chr14 75829002 75829475 + 6.44826545092254 NA Intergenic Intergenic 15726 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA common_peak1_23_229_-0.83171458285228_7.42963275951823_6.44804298929961 chr12 51847551 51848006 + 6.44804298929961 NA Intergenic Intergenic -18242 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak1_35_336_-0.665307108122835_8.06395122712044_6.44692128997422 chr5 92490415 92490976 + 6.44692128997422 NA intron (NM_007644, intron 1 of 11) intron (NM_007644, intron 1 of 11) 14962 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding common_peak1_35_336_-0.665307108122835_8.06395122712044_6.44692128997422-2 chr9 105395178 105395904 + 6.44692128997422 NA promoter-TSS (NM_172461) promoter-TSS (NM_172461) 149 NM_025651 66595 Mm.84941 NM_025651 ENSMUSG00000032567 Aste1 1100001A21Rik|AV006403 asteroid homolog 1 (Drosophila) protein-coding common_peak1_64_611_-0.480473322359755_9.01715118151277_6.44686526390133 chr13 95711079 95712485 + 6.44686526390133 NA intron (NM_027711, intron 12 of 35) MLT1A1|LTR|ERVL-MaLR 14862 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak1_52_216_0.654190532998633_8.0886464989438_6.44464735377744 chr11 106663004 106664053 + 6.44464735377744 NA intron (NM_001305158, intron 13 of 14) intron (NM_001305158, intron 13 of 14) -50598 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding common_peak1_52_216_0.654190532998633_8.0886464989438_6.44464735377744-2 chr7 16043474 16044715 + 6.44464735377744 NA Intergenic Intergenic -27848 NM_001099277 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak2_90_871_-0.39583928205688_9.57026468374849_6.44422404196587 chr14 65342680 65344751 + 6.44422404196587 NA Intergenic CpG -14961 NM_199029 380912 Mm.270087 NM_199029 ENSMUSG00000034522 Zfp395 BC053701|Gm910 zinc finger protein 395 protein-coding common_peak1_36_346_-0.65900820136685_8.10928775189484_6.44322745210179 chr4 147868748 147869342 + 6.44322745210179 NA promoter-TSS (NM_001025365) promoter-TSS (NM_001025365) 66 NM_010244 14349 Mm.422607 NM_010244 ENSMUSG00000070583 Fv1 Fv-1|Rv-1|Rv1 Friend virus susceptibility 1 protein-coding unique_peak2_36_346_-0.65900820136685_8.10928775189484_6.44322745210179 chr14 53802686 53804620 + 6.44322745210179 NA Intergenic Intergenic 450276 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_33_106_0.888681585759381_7.18580777928084_6.44270865030183 chr6 54151060 54151973 + 6.44270865030183 NA intron (NM_001163640, intron 1 of 12) intron (NM_001163640, intron 1 of 12) 111584 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak2_33_106_0.888681585759381_7.18580777928084_6.44270865030183-2 chr8 126882128 126882897 + 6.44270865030183 NA Intergenic MLT1B|LTR|ERVL-MaLR 63409 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak2_71_679_-0.451480951892323_9.18365046019154_6.44199646705266 chr2 3423050 3424909 + 6.44199646705266 NA promoter-TSS (NM_001110214) promoter-TSS (NM_001110214) -152 NM_146114 227525 Mm.23483 NM_146114 ENSMUSG00000026648 Dclre1c 9930121L06Rik|AI661365|Art|Snm1l DNA cross-link repair 1C protein-coding common_peak1_71_679_-0.451480951892323_9.18365046019154_6.44199646705266 chr10 19502197 19503469 + 6.44199646705266 NA Intergenic Intergenic -89125 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak2_295_2431_0.211693071326893_11.353774049107_6.44084206776772 chr1 171058144 171062294 + 6.44084206776772 NA promoter-TSS (NM_010188) promoter-TSS (NM_010188) -816 NM_010188 14131 Mm.22119 NM_010188 ENSMUSG00000059498 Fcgr3 CD16 Fc receptor, IgG, low affinity III protein-coding common_peak1_110_1079_-0.352897429686136_9.90036688220776_6.44007494200266 chr19 11047491 11049116 + 6.44007494200266 NA non-coding (NR_102366, exon 2 of 3) non-coding (NR_102366, exon 2 of 3) 2263 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA common_peak1_26_71_1.05228256539728_6.69606628414095_6.43873601333763-2 chr12 85628939 85629466 + 6.43873601333763 NA intron (NM_001205052, intron 2 of 3) intron (NM_001205052, intron 2 of 3) 29184 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak1_26_71_1.05228256539728_6.69606628414095_6.43873601333763 chr12 73708499 73709250 + 6.43873601333763 NA intron (NM_001313977, intron 10 of 14) intron (NM_001313977, intron 10 of 14) 124078 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_106_1036_-0.359229759457453_9.8385852990845_6.43829768258248 chr11 106065414 106066899 + 6.43829768258248 NA promoter-TSS (NM_027346) promoter-TSS (NM_027346) 49 NM_027346 70207 Mm.343857 NM_027346 ENSMUSG00000001983 Taco1 2310066I18Rik|Ccdc44 translational activator of mitochondrially encoded cytochrome c oxidase I protein-coding unique_peak2_55_523_-0.520245940333169_8.77330003137087_6.43823133807932 chr3 148694824 148696794 + 6.43823133807932 NA Intergenic L1M4|LINE|L1 258826 NM_001081298 99633 Mm.9776 NM_001081298 ENSMUSG00000028184 Adgrl2 AI450192|CIRL-2|Gm619|Lec1|Lphh1|Lphn2|mKIAA0786 adhesion G protein-coupled receptor L2 protein-coding common_peak1_402_3644_0.17398402059484_11.9186951095117_6.43684231953371 chr3 88620588 88624127 + 6.43684231953371 NA intron (NM_001198912, intron 1 of 21) intron (NM_001198912, intron 1 of 21) 963 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak2_173_1194_0.296615238984097_10.3711025223602_6.43606210485568 chr10 39433102 39438283 + 6.43606210485568 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 65893 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_173_1194_0.296615238984097_10.3711025223602_6.43606210485568-2 chr9 66349236 66351301 + 6.43606210485568 NA promoter-TSS (NM_145617) promoter-TSS (NM_145617) -182 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak1_65_302_0.560758275374285_8.5235531211601_6.43517490412058 chr9 75037550 75038405 + 6.43517490412058 NA intron (NM_021548, intron 1 of 2) CpG 245 NM_021548 59046 Mm.247837 NM_021548 ENSMUSG00000007656 Arpp19 19kDa|2700024H10Rik|ARPP-19|AW559096|Arpp12 cAMP-regulated phosphoprotein 19 protein-coding common_peak2_40_382_-0.619757316859531_8.27132192349519_6.43427363569841 chr11 50174246 50175621 + 6.43427363569841 NA promoter-TSS (NM_026543) promoter-TSS (NM_026543) 82 NM_026543 68067 Mm.40828 NM_026543 ENSMUSG00000020381 Mrnip 2900016G09Rik|3010026O09Rik|AI851514|AW475975 MRN complex interacting protein protein-coding common_peak1_371_4201_-0.172819103412744_11.9504508949667_6.43181453923218 chr6 57823959 57825801 + 6.43181453923218 NA intron (NM_146168, intron 1 of 4) CpG 245 NM_146168 232023 Mm.24642 NM_146168 ENSMUSG00000037788 Vopp1 AW146242|Ecop vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding common_peak1_98_953_-0.376390992191347_9.70964995990984_6.43170862676623 chr10 67644385 67645652 + 6.43170862676623 NA Intergenic Intergenic -96063 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_99_553_0.425497648459906_9.32649099027914_6.43104704842775 chr17 52159321 52160607 + 6.43104704842775 NA Intergenic Intergenic 277237 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA common_peak2_57_542_-0.509532762105437_8.83004200675164_6.43057498281878 chr7 127421233 127422332 + 6.43057498281878 NA intron (NM_026999, intron 1 of 2) intron (NM_026999, intron 1 of 2) 252 NM_026999 69234 Mm.20301 NM_026999 ENSMUSG00000045251 Zfp688 2810407K09Rik|AI326029 zinc finger protein 688 protein-coding common_peak1_170_1736_-0.273748803006933_10.6255076372069_6.42835865081278 chr10 128367833 128369452 + 6.42835865081278 NA intron (NM_001081040, intron 1 of 4) CpG 1395 NM_001081040 210582 Mm.296876 NM_001081040 ENSMUSG00000039914 Coq10a Gm1 coenzyme Q10A protein-coding unique_peak1_17_33_1.41722252062233_5.7960741015615_6.42818721507026-5 chr4 132588172 132588518 + 6.42818721507026 NA Intergenic URR1B|DNA|hAT-Charlie 24278 NM_001081211 19204 Mm.89389 NM_001081211 ENSMUSG00000056529 Ptafr PAFR platelet-activating factor receptor protein-coding unique_peak1_17_33_1.41722252062233_5.7960741015615_6.42818721507026-2 chr12 25346890 25347415 + 6.42818721507026 NA Intergenic Intergenic 217978 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak1_17_33_1.41722252062233_5.7960741015615_6.42818721507026 chr11 115373848 115374307 + 6.42818721507026 NA Intergenic Intergenic -6358 NM_175454 217310 Mm.205707 NM_175454 ENSMUSG00000034586 Hid1 C630004H02Rik HID1 domain containing protein-coding unique_peak1_17_33_1.41722252062233_5.7960741015615_6.42818721507026-3 chr16 93392425 93392827 + 6.42818721507026 NA Intergenic MER58A|DNA|hAT-Charlie 22906 NR_030429 791074 NR_030429 ENSMUSG00000076457 Mir802 Mirn802|mir-802|mmu-mir-802 microRNA 802 ncRNA common_peak1_17_33_1.41722252062233_5.7960741015615_6.42818721507026-2 chr2 102898797 102899204 + 6.42818721507026 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 2665 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_17_33_1.41722252062233_5.7960741015615_6.42818721507026 chr1 106560692 106561124 + 6.42818721507026 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -14277 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA unique_peak1_17_33_1.41722252062233_5.7960741015615_6.42818721507026-4 chr19 5806169 5806651 + 6.42818721507026 NA Intergenic Intergenic -3739 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak1_267_2132_0.225100072181863_11.1712182864315_6.42592743523632 chr9 95954068 95955852 + 6.42592743523632 NA intron (NM_001311130, intron 1 of 41) CpG 200 NM_001311130 24127 Mm.291179 NM_011916 ENSMUSG00000032410 Xrn1 Dhm2|exo|mXrn1 5'-3' exoribonuclease 1 protein-coding common_peak2_32_101_0.904894605689385_7.12487264481619_6.42382800297122 chr9 53602961 53604066 + 6.42382800297122 NA intron (NM_144784, intron 1 of 11) intron (NM_144784, intron 1 of 11) 6837 NM_144784 110446 Mm.293233 NM_144784 ENSMUSG00000032047 Acat1 6330585C21Rik|Acat acetyl-Coenzyme A acetyltransferase 1 protein-coding common_peak1_32_101_0.904894605689385_7.12487264481619_6.42382800297122 chr11 121421342 121422067 + 6.42382800297122 NA intron (NM_181420, intron 1 of 5) CpG 331 NM_181420 238024 Mm.117394 NM_181420 ENSMUSG00000039253 Fn3krp FN3K-RP fructosamine 3 kinase related protein protein-coding common_peak1_32_101_0.904894605689385_7.12487264481619_6.42382800297122-2 chr12 99944644 99945305 + 6.42382800297122 NA intron (NM_028354, intron 14 of 15) intron (NM_028354, intron 14 of 15) -19525 NM_001164426 217826 Mm.312335 NM_146037 ENSMUSG00000045404 Kcnk13 BB085247|F730021E22Rik|Gm1570|Gm1685 potassium channel, subfamily K, member 13 protein-coding common_peak2_233_1780_0.245218475845883_10.9210810390246_6.42275868914569 chr5 38874966 38878048 + 6.42275868914569 NA intron (NM_013748, intron 1 of 18) intron (NM_013748, intron 1 of 18) 186 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak2_107_1047_-0.357990812325143_9.85442759537488_6.42232062000212 chr14 57711361 57713935 + 6.42232062000212 NA intron (NM_015771, intron 2 of 7) tRNA-Ala-GCY_|tRNA|tRNA 21770 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_43_162_0.73768189964923_7.71756910405569_6.42167975861044 chr3 101923851 101924631 + 6.42167975861044 NA 5' UTR (NM_001039371, exon 1 of 12) 5' UTR (NM_001039371, exon 1 of 12) 212 NM_001039371 242126 Mm.90204 NM_001039371 ENSMUSG00000033147 Slc22a15 2610034P21Rik|4930477M19|A530052I06Rik|BB219042 solute carrier family 22 (organic anion/cation transporter), member 15 protein-coding common_peak2_54_229_0.635800967441541_8.16339053466515_6.4214830760431 chr7 29518048 29519201 + 6.4214830760431 NA Intergenic CpG -13164 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding common_peak1_77_387_0.499642918607091_8.84973430149067_6.4202720837033 chr9 57147780 57148905 + 6.4202720837033 NA Intergenic Intergenic -1308 NM_028347 72774 Mm.35749 NM_028347 ENSMUSG00000032298 Neil1 2810450N13Rik|Nei1 nei endonuclease VIII-like 1 (E. coli) protein-coding common_peak2_279_2260_0.218537371331074_11.2520139624171_6.41779371591368 chr8 116633989 116639138 + 6.41779371591368 NA intron (NM_029441, intron 1 of 6) B4A|SINE|B4 96428 NM_029441 75796 Mm.159575 NM_029441 ENSMUSG00000031758 Cdyl2 1700029M19Rik|4930453I21Rik|Gm20194 chromodomain protein, Y chromosome-like 2 protein-coding common_peak2_204_1491_0.26651703168851_10.6762903360995_6.41685591770345 chr19 24476425 24478181 + 6.41685591770345 NA exon (NM_026520, exon 1 of 1) exon (NM_026520, exon 1 of 1) 171 NM_026520 68034 Mm.440181 NM_026520 ENSMUSG00000074922 Fam122a 2410124L17Rik|2900009I07Rik|ENSMUSG00000051082|Gm9849 family with sequence similarity 122, member A protein-coding unique_peak2_33_318_-0.687264041604342_7.9737805929627_6.41679354546979 chrX 8175333 8176475 + 6.41679354546979 NA exon (NM_172478, exon 1 of 6) exon (NM_172478, exon 1 of 6) 277 NM_001166437 209815 Mm.122963 NM_172478 ENSMUSG00000039201 Tbc1d25 6330576A08Rik|DXHXS7927e|Oatl1 TBC1 domain family, member 25 protein-coding common_peak1_142_913_0.336139991524357_10.0041203508202_6.41658911127245 chr4 46195464 46196937 + 6.41658911127245 NA exon (NM_011728, exon 1 of 6) exon (NM_011728, exon 1 of 6) 111 NM_011728 22590 Mm.247036 NM_011728 ENSMUSG00000028329 Xpa AI573865|Xpac xeroderma pigmentosum, complementation group A protein-coding common_peak1_265_2111_0.226118504490262_11.1574533716036_6.41647856995833 chr8 85554237 85556561 + 6.41647856995833 NA promoter-TSS (NM_019794) promoter-TSS (NM_019794) -128 NM_019794 56445 Mm.475573 NM_019794 ENSMUSG00000031701 Dnaja2 1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3 DnaJ heat shock protein family (Hsp40) member A2 protein-coding common_peak1_27_76_1.01977820932302_6.77667564535641_6.41604685165509 chr8 69584497 69585033 + 6.41604685165509 NA Intergenic CpG 40410 NM_001045553 234362 Mm.458487 NM_172754 ENSMUSG00000060427 Zfp868 AI449175|AW108241|C530032E20|mszf62 zinc finger protein 868 protein-coding common_peak2_27_76_1.01977820932302_6.77667564535641_6.41604685165509 chr16 75921021 75921611 + 6.41604685165509 NA Intergenic Intergenic -12050 NM_023380 67742 Mm.131406 NM_023380 ENSMUSG00000022876 Samsn1 4930571B16Rik|930571B16Rik|Hacs1|SLy2 SAM domain, SH3 domain and nuclear localization signals, 1 protein-coding common_peak2_355_3100_0.18772518052428_11.6923804008748_6.41586619178395 chr17 36120271 36123433 + 6.41586619178395 NA promoter-TSS (NR_046286) promoter-TSS (NR_046286) -408 NR_046286 15024 Mm.426031 NM_010395 ENSMUSG00000079491 H2-T10 H-2T10 histocompatibility 2, T region locus 10 protein-coding common_peak1_38_133_0.806854259150088_7.46951632003282_6.41537170642416 chr2 23012472 23013174 + 6.41537170642416 NA intron (NM_001077190, intron 1 of 10) MMVL30-int|LTR|ERV1 27418 NM_001077192 11308 Mm.205647 NM_007380 ENSMUSG00000058835 Abi1 E3B1|NAP1|Ssh3bp1|abi-1 abl-interactor 1 protein-coding unique_peak2_38_133_0.806854259150088_7.46951632003282_6.41537170642416 chr4 150087204 150088368 + 6.41537170642416 NA exon (NM_177366, exon 1 of 4) exon (NM_177366, exon 1 of 4) 283 NM_177366 269604 Mm.219307 NM_177366 ENSMUSG00000047875 Gpr157 F730108M23Rik G protein-coupled receptor 157 protein-coding common_peak1_104_593_0.411261109876053_9.41994967573879_6.41527419222917 chr4 133872015 133873504 + 6.41527419222917 NA intron (NM_009097, intron 2 of 21) intron (NM_009097, intron 2 of 21) 1972 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_59_562_-0.50172236829617_8.88612992793215_6.41471415024016 chr2 128317890 128320070 + 6.41471415024016 NA intron (NR_028590, intron 2 of 2) intron (NR_028590, intron 2 of 2) 110371 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_26_255_-0.777792433160405_7.6111037834198_6.41157674331514 chr7 105554416 105554817 + 6.41157674331514 NA exon (NM_011421, exon 1 of 6) exon (NM_011421, exon 1 of 6) 256 NM_011421 20597 Mm.4628 NM_011421 ENSMUSG00000037049 Smpd1 A-SMase|ASM|Zn-SMase|aSMase sphingomyelin phosphodiesterase 1, acid lysosomal protein-coding common_peak2_114_674_0.387822699033636_9.59265504145501_6.41143499971746 chr10 22305773 22307895 + 6.41143499971746 NA non-coding (NR_015465, exon 1 of 3) non-coding (NR_015465, exon 1 of 3) 114 NR_015465 606736 Mm.387042 NR_015465 ENSMUSG00000097352 C920009B18Rik - RIKEN cDNA C920009B18 gene ncRNA common_peak1_25_67_1.06795840339059_6.62144204294564_6.4113423294362 chr15 53345463 53345931 + 6.4113423294362 NA 5' UTR (NM_010162, exon 1 of 11) 5' UTR (NM_010162, exon 1 of 11) 486 NM_010162 14042 Mm.309395 NM_010162 ENSMUSG00000061731 Ext1 AA409028 exostoses (multiple) 1 protein-coding common_peak1_25_67_1.06795840339059_6.62144204294564_6.4113423294362-2 chr5 111754941 111755444 + 6.4113423294362 NA intron (NR_045833, intron 1 of 4) intron (NR_045833, intron 1 of 4) 6536 NR_045832 269683 Mm.136946 NM_207252 ENSMUSG00000085271 E130006D01Rik Gm16018|Gm681|OTTMUSG00000029083 RIKEN cDNA E130006D01 gene ncRNA common_peak2_92_891_-0.390083179032715_9.60585831040395_6.41100513117674 chrX 74022629 74024673 + 6.41100513117674 NA promoter-TSS (NR_039594) promoter-TSS (NR_039594) -53 NR_039594 100628601 NR_039594 ENSMUSG00000092907 Mir5132 mir-5132|mmu-mir-5132|mu-mir-5132 microRNA 5132 ncRNA common_peak2_83_431_0.475811764007743_8.99279338416734_6.4097990293034 chr9 57147518 57149036 + 6.4097990293034 NA Intergenic Intergenic -1243 NM_028347 72774 Mm.35749 NM_028347 ENSMUSG00000032298 Neil1 2810450N13Rik|Nei1 nei endonuclease VIII-like 1 (E. coli) protein-coding common_peak2_31_96_0.922952732124396_7.06138920824933_6.40969781131063 chr9 82963574 82964436 + 6.40969781131063 NA intron (NM_001081216, intron 4 of 39) intron (NM_001081216, intron 4 of 39) 11484 NM_001081216 83946 Mm.221688 NM_031879 ENSMUSG00000032253 Phip 2810004D21Rik|4632404O06Rik|Ndrp|Wdr11 pleckstrin homology domain interacting protein protein-coding common_peak2_70_337_0.532280109564834_8.6670194910646_6.40959603256822 chrX 162887533 162888503 + 6.40959603256822 NA intron (NM_025932, intron 1 of 8) intron (NM_025932, intron 1 of 8) 444 NM_025932 67043 Mm.44207 NM_025932 ENSMUSG00000031357 Syap1 2010110O17Rik|AW011796 synapse associated protein 1 protein-coding common_peak1_77_739_-0.431825699722095_9.31546861065527_6.40948991310226 chr4 136177540 136178904 + 6.40948991310226 NA intron (NM_177733, intron 1 of 6) intron (NM_177733, intron 1 of 6) -2560 NM_001305399 242705 Mm.307932 NM_177733 ENSMUSG00000018983 E2f2 E2F-2 E2F transcription factor 2 protein-coding common_peak1_54_513_-0.524333530807963_8.7434577837899_6.40813789954404 chr16 36041205 36041982 + 6.40813789954404 NA exon (NM_027113, exon 1 of 1) exon (NM_027113, exon 1 of 1) 403 NM_027113 69544 Mm.37802 NM_027113 ENSMUSG00000034379 Wdr5b 2310009C03Rik|AI606931 WD repeat domain 5B protein-coding common_peak1_104_1015_-0.363104456095346_9.80713245872449_6.40724990534294 chr7 126798213 126799359 + 6.40724990534294 NA intron (NM_001177307, intron 1 of 9) intron (NM_001177307, intron 1 of 9) 392 NM_001177307 11674 Mm.275831 NM_007438 ENSMUSG00000030695 Aldoa Aldo-1|Aldo1 aldolase A, fructose-bisphosphate protein-coding unique_peak1_20_45_1.25391268774148_6.15051829992776_6.40702459448108 chr2 91955054 91955607 + 6.40702459448108 NA intron (NM_138306, intron 1 of 30) intron (NM_138306, intron 1 of 30) -4982 NM_001166597 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak1_56_242_0.619686215944392_8.23465561157798_6.40699395903608 chr3 131139601 131140564 + 6.40699395903608 NA intron (NM_001276402, intron 3 of 9) intron (NM_001276402, intron 3 of 9) 27291 NM_001276403 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak1_158_1600_-0.284881310919859_10.5023169370563_6.40617829141558 chr7 126703243 126705542 + 6.40617829141558 NA promoter-TSS (NM_001301374) promoter-TSS (NM_001301374) -172 NM_001301374 12721 Mm.290482 NM_009898 ENSMUSG00000030707 Coro1a Clabp|Lmb3|TACO|p57 coronin, actin binding protein 1A protein-coding common_peak1_32_309_-0.698804457613359_7.92672217646756_6.40556894623519-2 chr6 99258537 99259034 + 6.40556894623519 NA intron (NM_001197321, intron 2 of 17) intron (NM_001197321, intron 2 of 17) 7730 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_32_309_-0.698804457613359_7.92672217646756_6.40556894623519 chr11 119267882 119268470 + 6.40556894623519 NA 5' UTR (NM_008064, exon 1 of 20) 5' UTR (NM_008064, exon 1 of 20) 168 NM_008064 14387 Mm.4793 NM_008064 ENSMUSG00000025579 Gaa E430018M07Rik glucosidase, alpha, acid protein-coding common_peak2_437_4062_0.164736204494179_12.0706977514782_6.4050380310794 chr5 124474711 124479572 + 6.4050380310794 NA intron (NM_030259, intron 1 of 3) (GAGAA)n|Simple_repeat|Simple_repeat 1094 NM_030259 80291 Mm.425280 NM_030259 ENSMUSG00000029401 Rilpl2 - Rab interacting lysosomal protein-like 2 protein-coding common_peak1_127_783_0.361380352569029_9.79540002039972_6.40393331904419 chr5 98030129 98031618 + 6.40393331904419 NA promoter-TSS (NM_133738) promoter-TSS (NM_133738) 89 NM_133738 71914 Mm.24842 NM_133738 ENSMUSG00000029338 Antxr2 2310046B19Rik|AW561899|CMG-2|CMG2|cI-35 anthrax toxin receptor 2 protein-coding common_peak1_321_2718_0.199748788520578_11.5087348302851_6.40378138745412 chr5 112277804 112280992 + 6.40378138745412 NA intron (NM_009419, intron 1 of 6) intron (NM_009419, intron 1 of 6) 2691 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_75_718_-0.436259134669694_9.27171839310445_6.40355071091293 chr9 32900571 32902711 + 6.40355071091293 NA Intergenic Intergenic 27325 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak2_663_6948_0.126753137184847_12.825966234135_6.40315327562657 chr19 53898370 53906824 + 6.40315327562657 NA promoter-TSS (NM_001168492) promoter-TSS (NM_001168492) -754 NM_001168492 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak2_83_799_-0.413156923603514_9.43727772797297_6.40220832123016 chr17 34849420 34851380 + 6.40220832123016 NA promoter-TSS (NM_138580) promoter-TSS (NM_138580) 9 NM_001045864 27632 Mm.653 NM_138580 ENSMUSG00000024369 Nelfe D17H6S45|NELF-E|RD|Rdbp negative elongation factor complex member E, Rdbp protein-coding common_peak1_70_669_-0.454857739498118_9.16058841559608_6.40135809741702 chr13 51963612 51964981 + 6.40135809741702 NA Intergenic Intergenic 117621 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_30_91_0.943120248677293_6.99512208039566_6.40097888115481-3 chr5 148310855 148311442 + 6.40097888115481 NA intron (NM_029920, intron 14 of 14) MuRRS-int|LTR|ERV1 81667 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_30_91_0.943120248677293_6.99512208039566_6.40097888115481 chr13 5849008 5849550 + 6.40097888115481 NA Intergenic Intergenic 8813 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_30_91_0.943120248677293_6.99512208039566_6.40097888115481-2 chr14 54259400 54259846 + 6.40097888115481 NA intron (NM_134076, intron 1 of 6) intron (NM_134076, intron 1 of 6) 391 NM_134076 105501 Mm.28771 NM_134076 ENSMUSG00000040997 Abhd4 1110035H23Rik|AI429574|Abh4 abhydrolase domain containing 4 protein-coding common_peak2_30_91_0.943120248677293_6.99512208039566_6.40097888115481 chr6 129786569 129787369 + 6.40097888115481 NA Intergenic MTEb|LTR|ERVL-MaLR -11120 NM_001014997 232415 Mm.290598 NM_001014997 ENSMUSG00000071158 Gm156 Klrh1 predicted gene 156 protein-coding common_peak1_196_2033_-0.2509973472322_10.8646052902414_6.40039313149822 chr1 88654031 88656617 + 6.40039313149822 NA Intergenic Intergenic 46867 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_42_156_0.751106421362324_7.67017395957279_6.39980024434933 chr10 118549870 118550504 + 6.39980024434933 NA intron (NR_104123, intron 1 of 4) ORR1B2|LTR|ERVL-MaLR 6338 NR_104123 103214 Mm.30529 NR_104123 Tmevpg1 AI447422 Theiler's murine encephalomyelitis virus persistence candidate gene 1 ncRNA common_peak2_127_1259_-0.323117821703043_10.1376491075358_6.39912529849773 chr17 47509864 47512714 + 6.39912529849773 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 6238 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_29_86_0.965712936748975_6.92579996422322_6.39846120706311 chr2 66124225 66124945 + 6.39846120706311 NA 5' UTR (NM_015736, exon 1 of 11) 5' UTR (NM_015736, exon 1 of 11) 208 NM_015736 14425 Mm.439760 NM_015736 ENSMUSG00000026994 Galnt3 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 protein-coding common_peak1_78_394_0.496390248048851_8.87390396708889_6.39773937567267 chr2 25364721 25366217 + 6.39773937567267 NA exon (NM_001033293, exon 1 of 9) exon (NM_001033293, exon 1 of 9) 157 NM_001033293 227620 Mm.33797 NM_001033293 ENSMUSG00000026956 Uap1l1 5730445F03Rik UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 protein-coding common_peak1_78_394_0.496390248048851_8.87390396708889_6.39773937567267-2 chr3 138488715 138489457 + 6.39773937567267 NA intron (NM_175224, intron 1 of 10) CpG 296 NM_175224 75624 Mm.26833 NM_175224 ENSMUSG00000005813 Metap1 1700029C17Rik|AW047992|mKIAA0094 methionyl aminopeptidase 1 protein-coding common_peak2_66_309_0.554419294875485_8.55333405271198_6.39697635237865 chr4 21879185 21880553 + 6.39697635237865 NA intron (NM_172687, intron 1 of 6) CpG 194 NM_172687 230027 Mm.5662 NM_172687 ENSMUSG00000028247 Coq3 4732433J24|C77934 coenzyme Q3 methyltransferase protein-coding common_peak2_166_1130_0.30336339169814_10.2950649098389_6.39485155801327 chr1 151499768 151501628 + 6.39485155801327 NA intron (NM_011277, intron 1 of 6) CpG 125 NM_011277 19821 Mm.474038 NM_011277 ENSMUSG00000026484 Rnf2 AI326319|AI450156|AU019207|Ring1B|dinG ring finger protein 2 protein-coding common_peak1_20_203_-0.894950698172997_7.224949992885_6.39293205023876 chr2 26668487 26668828 + 6.39293205023876 NA exon (NM_010695, exon 5 of 7) exon (NM_010695, exon 5 of 7) 2625 NM_010695 16821 Mm.123925 NM_010695 ENSMUSG00000026919 Lcn4 A630045M08Rik|Vnsp2 lipocalin 4 protein-coding common_peak1_42_400_-0.601731256200969_8.34659279835444_6.39277564100439 chr16 91728796 91729215 + 6.39277564100439 NA promoter-TSS (NM_133679) promoter-TSS (NM_133679) -203 NM_133679 66609 Mm.109823 NM_026994 ENSMUSG00000058240 Cryzl1 2210407J23Rik|2410006O11Rik|QOH-1 crystallin, zeta (quinone reductase)-like 1 protein-coding common_peak2_167_1701_-0.275703744328396_10.5951634495218_6.39235099685829 chr9 85117478 85123166 + 6.39235099685829 NA Intergenic Intergenic 206802 NM_001160378 212943 Mm.74610 NM_001160378 ENSMUSG00000032265 Fam46a BAP014|D930050G01Rik family with sequence similarity 46, member A protein-coding common_peak1_81_416_0.48415200280712_8.94597957484822_6.3916658914545 chr2 128152098 128153122 + 6.3916658914545 NA intron (NM_009754, intron 3 of 3) intron (NM_009754, intron 3 of 3) 25035 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding unique_peak1_12_16_1.84134609220424_5.00813588735246_6.39159348166101 chr15 74927254 74927581 + 6.39159348166101 NA Intergenic Intergenic -27634 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak2_29_282_-0.736001810234179_7.77665733771479_6.39058068140505 chr11 88145437 88146527 + 6.39058068140505 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) -23583 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak1_252_2698_-0.216367044245489_11.2900257393441_6.38841958608404 chr7 43429366 43431741 + 6.38841958608404 NA intron (NM_177693, intron 1 of 4) intron (NM_177693, intron 1 of 4) 452 NM_177693 233187 Mm.267027 NM_177693 ENSMUSG00000004613 Lim2 19kDa|4833403J20|MP19|To3 lens intrinsic membrane protein 2 protein-coding common_peak1_122_741_0.370302404597908_9.72042657891976_6.38819267071527 chr11 76762771 76763705 + 6.38819267071527 NA intron (NM_016810, intron 1 of 8) intron (NM_016810, intron 1 of 8) 317 NM_016810 53334 Mm.20931 NM_016810 ENSMUSG00000010392 Gosr1 AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28 golgi SNAP receptor complex member 1 protein-coding common_peak1_106_1035_-0.357837868330781_9.83788935352116_6.38776073718361 chr11 102880413 102881525 + 6.38776073718361 NA promoter-TSS (NM_011431) promoter-TSS (NM_011431) 6 NM_011431 20624 Mm.873 NM_011431 ENSMUSG00000020929 Eftud2 116kDa|Snrp116|U5-116kD elongation factor Tu GTP binding domain containing 2 protein-coding common_peak1_87_839_-0.40122315259946_9.51363394136639_6.38705432428895 chr2 119208053 119208868 + 6.38705432428895 NA promoter-TSS (NM_001164827) promoter-TSS (NM_001164827) -260 NM_001164827 72008 Mm.386807 NM_028054 ENSMUSG00000068580 Zfyve19 1500041L05Rik|ANCHR zinc finger, FYVE domain containing 19 protein-coding unique_peak1_15_26_1.5413657609617_5.52557038264432_6.38615039722466 chr9 44488974 44489329 + 6.38615039722466 NA Intergenic Intergenic -9985 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak2_318_2685_0.200801138212979_11.4916441585339_6.38562590825854 chr12 99559523 99565951 + 6.38562590825854 NA Intergenic Intergenic 65237 NR_045288 73457 Mm.383439 NR_045288 ENSMUSG00000100211 1700064M15Rik - RIKEN cDNA 1700064M15 gene ncRNA common_peak2_62_590_-0.485405160225749_8.96431174006466_6.38524812847833 chr2 145196411 145198986 + 6.38524812847833 NA Intergenic IMPB_01|Satellite|Satellite -44913 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding common_peak1_62_590_-0.485405160225749_8.96431174006466_6.38524812847833 chr19 11411715 11412661 + 6.38524812847833 NA intron (NM_029499, intron 1 of 6) Lx10|LINE|L1 4527 NM_029499 64380 Mm.440715 NM_029499 ENSMUSG00000024675 Ms4a4c 5830413L19Rik|AI449185|Ms4a9 membrane-spanning 4-domains, subfamily A, member 4C protein-coding common_peak1_21_49_1.21594155291923_6.25182696623434_6.38286315664609 chr5 120830900 120831389 + 6.38286315664609 NA Intergenic ORR1A4|LTR|ERVL-MaLR -16223 NM_145153 243262 Mm.105369 NM_145153 ENSMUSG00000053765 Oas1f - 2'-5' oligoadenylate synthetase 1F protein-coding common_peak1_21_49_1.21594155291923_6.25182696623434_6.38286315664609-2 chr8 34142716 34143157 + 6.38286315664609 NA intron (NM_026609, intron 1 of 3) intron (NM_026609, intron 1 of 3) 3803 NM_026609 68192 Mm.34212 NM_026609 ENSMUSG00000031513 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 protein-coding unique_peak1_21_49_1.21594155291923_6.25182696623434_6.38286315664609 chr11 87666180 87666721 + 6.38286315664609 NA intron (NM_172448, intron 2 of 9) intron (NM_172448, intron 2 of 9) 3363 NM_172448 207742 Mm.440230 NM_172448 ENSMUSG00000034177 Rnf43 4732452J19Rik ring finger protein 43 protein-coding unique_peak2_15_160_-1.03466361498945_6.81358507061989_6.38183806964331 chr18 67872000 67873076 + 6.38183806964331 NA intron (NM_027556, intron 41 of 45) B3A|SINE|B2 -60719 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_15_160_-1.03466361498945_6.81358507061989_6.38183806964331 chr5 134689163 134689543 + 6.38183806964331 NA promoter-TSS (NM_010717) promoter-TSS (NM_010717) -763 NM_010717 16885 Mm.15409 NM_010717 ENSMUSG00000029674 Limk1 KIZ-1|LIMK-1|Limk LIM-domain containing, protein kinase protein-coding common_peak1_51_211_0.654113101264089_8.05497700519524_6.38120187463949 chr3 152713685 152714614 + 6.38120187463949 NA promoter-TSS (NM_178016) promoter-TSS (NM_178016) 49 NM_025662 329777 Mm.331447 NM_025662 ENSMUSG00000039047 Pigk 3000001O05Rik phosphatidylinositol glycan anchor biosynthesis, class K protein-coding common_peak1_60_571_-0.495351885731417_8.91219539391268_6.38113444685249 chr4 149665281 149666152 + 6.38113444685249 NA intron (NM_001164050, intron 2 of 23) L1M5|LINE|L1 -2400 NM_001164052 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_84_809_-0.410136249919496_9.45670997281224_6.38112802959416 chr11 32561687 32563140 + 6.38112802959416 NA intron (NM_009288, intron 2 of 18) (TTTA)n|Simple_repeat|Simple_repeat 29147 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_94_911_-0.38442022388953_9.64067990221998_6.38044987202829 chr5 145280163 145281495 + 6.38044987202829 NA Intergenic CpG -2514 NM_001081431 666311 Mm.260773 NM_001081431 ENSMUSG00000070420 Zscan25 EG666311|Zfp498 zinc finger and SCAN domain containing 25 protein-coding common_peak1_250_2674_-0.217525695361873_11.2765603284949_6.37939112287154 chr2 165326655 165330628 + 6.37939112287154 NA Intergenic Intergenic -2162 NM_207706 140579 Mm.35064 NM_080287 ENSMUSG00000017670 Elmo2 1190002F24Rik|CED-12 engulfment and cell motility 2 protein-coding common_peak2_71_344_0.527457432579848_8.69418126795546_6.37905332810043 chr13 43452546 43454573 + 6.37905332810043 NA intron (NM_019930, intron 2 of 13) intron (NM_019930, intron 2 of 13) 27414 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak2_151_994_0.321648421524946_10.1193769261935_6.37791559751761 chr16 20672174 20674357 + 6.37791559751761 NA intron (NM_001304432, intron 1 of 31) CpG 538 NM_001304432 208643 Mm.260256 NM_145941 ENSMUSG00000045983 Eif4g1 E030015G23Rik|eIF-4-gamma 1|eIF-4G 1|eIF-4G1|eIF4GI eukaryotic translation initiation factor 4, gamma 1 protein-coding common_peak2_53_223_0.641464955968347_8.12808740004178_6.37771751434495 chr4 134651887 134653336 + 6.37771751434495 NA intron (NM_207237, intron 1 of 11) MIRb|SINE|MIR 51679 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak2_37_128_0.815749259159992_7.41910188500325_6.37635881958497 chr10 75277581 75278688 + 6.37635881958497 NA intron (NM_153406, intron 12 of 15) intron (NM_153406, intron 12 of 15) -38743 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak2_152_1533_-0.291277474222193_10.4374440303918_6.37613026331007 chr7 4136201 4138132 + 6.37613026331007 NA promoter-TSS (NR_033548) promoter-TSS (NR_033548) 110 NM_172736 232798 Mm.22831 NM_172736 ENSMUSG00000035545 Leng8 AW049671 leukocyte receptor cluster (LRC) member 8 protein-coding common_peak1_331_2830_0.195634457635315_11.5649132627234_6.37609203017389 chr3 95817793 95820302 + 6.37609203017389 NA promoter-TSS (NM_001081293) promoter-TSS (NM_001081293) -94 NM_001081293 75137 Mm.196275 NM_028328 ENSMUSG00000028106 Rprd2 2810036A19Rik|4930535B03Rik|6720469I21Rik|AL022841|AL022940|AU021304|BB077382|mKIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding common_peak2_306_2553_0.205648462197413_11.4213670408014_6.37524644911188 chr1 194975748 194978471 + 6.37524644911188 NA promoter-TSS (NR_033564) promoter-TSS (NR_033564) -150 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA common_peak2_450_4221_0.16111381484612_12.1242677707702_6.37518951543332 chr12 108791675 108796017 + 6.37518951543332 NA exon (NM_009537, exon 1 of 5) exon (NM_009537, exon 1 of 5) 535 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak2_202_1472_0.26765770874219_10.6583705694069_6.37254528030881 chr4 86855867 86858266 + 6.37254528030881 NA intron (NM_009096, intron 1 of 4) CpG 301 NM_009096 20104 Mm.379007 NM_009096 ENSMUSG00000028495 Rps6 S6R ribosomal protein S6 protein-coding common_peak1_91_880_-0.391312782454191_9.58734181769332_6.37254158727388 chr6 48085444 48086684 + 6.37254158727388 NA intron (NM_001163475, intron 1 of 6) CpG 529 NM_001163475 69228 Mm.207555 NM_001163475 ENSMUSG00000057691 Zfp746 2810407L07Rik|AI317225|Znf746 zinc finger protein 746 protein-coding common_peak1_69_658_-0.456076629298162_9.13609634035897_6.37170277633784 chr10 75281577 75282818 + 6.37170277633784 NA intron (NM_153406, intron 13 of 15) L1_Mur3|LINE|L1 -34680 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding unique_peak2_11_125_-1.19011676659418_6.38222154020283_6.37107784477597 chr17 34239353 34240380 + 6.37107784477597 NA intron (NM_010389, intron 1 of 5) intron (NM_010389, intron 1 of 5) 961 NM_010389 15002 Mm.327358 NM_010389 ENSMUSG00000041538 H2-Ob A-beta-2|A-beta2|H-2Ab|H-2I|H-2Ob|H2-Ab|H2-Ab2|H2-IAb2|Ob histocompatibility 2, O region beta locus protein-coding common_peak1_141_1411_-0.303752516237807_10.3116481151523_6.37089638061536 chr10 30617629 30619114 + 6.37089638061536 NA promoter-TSS (NM_025798) promoter-TSS (NM_025798) -5 NM_025798 66847 Mm.46218 NM_025798 ENSMUSG00000019791 Hint3 0610010I17Rik|AV009015|HINT-3|HINT-4|HINT4 histidine triad nucleotide binding protein 3 protein-coding common_peak1_91_492_0.446241590088311_9.16856463142207_6.36965791690583 chr1 131203031 131204431 + 6.36965791690583 NA intron (NM_018750, intron 2 of 5) B3|SINE|B2 -3546 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak2_85_818_-0.405380160200703_9.47502956154066_6.36940807175118 chr17 26252123 26253969 + 6.36940807175118 NA exon (NM_025881, exon 1 of 9) exon (NM_025881, exon 1 of 9) 136 NR_037905 66978 Mm.440216 NM_025881 ENSMUSG00000024188 Luc7l 1810045C04Rik|2410018D03Rik Luc7-like protein-coding unique_peak2_6_84_-1.57605080849249_5.62136553189146_6.3685573603352-2 chr4 51253820 51254379 + 6.3685573603352 NA Intergenic Intergenic 37421 NM_001162865 74914 Mm.159368 NM_001162865 ENSMUSG00000039555 Cylc2 4930488P18Rik cylicin, basic protein of sperm head cytoskeleton 2 protein-coding unique_peak2_6_84_-1.57605080849249_5.62136553189146_6.3685573603352-4 chr6 115015585 115016208 + 6.3685573603352 NA intron (NM_026894, intron 5 of 7) ID_B1|SINE|B4 21978 NM_026894 68971 Mm.24937 NM_026894 ENSMUSG00000030316 Tamm41 1500001M20Rik|TAM41 TAM41 mitochondrial translocator assembly and maintenance homolog protein-coding unique_peak2_6_84_-1.57605080849249_5.62136553189146_6.3685573603352-3 chr4 98282494 98283136 + 6.3685573603352 NA Intergenic Lx8|LINE|L1 100450 NM_053157 94043 Mm.331719 NM_053157 ENSMUSG00000028563 Tm2d1 2310026L18Rik|AA990549|Bbp TM2 domain containing 1 protein-coding unique_peak2_6_84_-1.57605080849249_5.62136553189146_6.3685573603352 chr10 79990711 79991596 + 6.3685573603352 NA intron (NM_007725, intron 1 of 6) intron (NM_007725, intron 1 of 6) 2553 NM_007725 12798 Mm.157770 NM_007725 ENSMUSG00000004665 Cnn2 AA408047|AI324678|Calpo2 calponin 2 protein-coding common_peak2_69_330_0.537370618902672_8.63937271625855_6.36785529176743 chr11 115054016 115055857 + 6.36785529176743 NA intron (NM_172050, intron 2 of 3) intron (NM_172050, intron 2 of 3) -6641 NM_199201 382551 Mm.424732 NM_199201 ENSMUSG00000069607 Cd300ld3 AY457049|Cd300lh|Clm3|Lmir7|clm-3 CD300 molecule like family member D3 protein-coding common_peak1_55_522_-0.517490075042661_8.77192209872561_6.36728345266818 chr18 40218668 40219460 + 6.36728345266818 NA intron (NM_023311, intron 1 of 5) CpG 335 NM_023311 67180 Mm.270382 NM_023311 ENSMUSG00000024487 Yipf5 2610311I19Rik|AA408236|Yip1a Yip1 domain family, member 5 protein-coding common_peak1_99_962_-0.372152173334364_9.72531590117628_6.36666617037956 chr1 43541168 43543154 + 6.36666617037956 NA intron (NM_010879, intron 3 of 4) intron (NM_010879, intron 3 of 4) 96410 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding unique_peak2_3_57_-2.01495235437512_4.85050481794001_6.36547620157964 chr11 4864870 4865371 + 6.36547620157964 NA Intergenic Intergenic -8883 NM_008698 18082 Mm.293716 NM_008698 ENSMUSG00000034285 Nipsnap1 - nipsnap homolog 1 (C. elegans) protein-coding unique_peak2_18_185_-0.938794607711141_7.06976150725246_6.36486820523011 chr17 7108896 7110181 + 6.36486820523011 NA Intergenic Intergenic -60577 NM_011299 20112 Mm.268383 NM_011299 ENSMUSG00000023809 Rps6ka2 90kDa|D17Wsu134e|Rps6ka-rs1|Rsk3|p90rsk|pp90rsk ribosomal protein S6 kinase, polypeptide 2 protein-coding common_peak1_18_185_-0.938794607711141_7.06976150725246_6.36486820523011 chr18 69343903 69344329 + 6.36486820523011 NA promoter-TSS (NM_013685) promoter-TSS (NM_013685) -376 NM_013685 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak2_159_1610_-0.282769617516724_10.5123559699482_6.36442866802375 chr6 113045365 113047932 + 6.36442866802375 NA intron (NM_008188, intron 1 of 9) intron (NM_008188, intron 1 of 9) 321 NM_008188 14911 Mm.781 NM_008188 ENSMUSG00000030264 Thumpd3 AW556087|Gt(ROSA)26asSor|Gtrosa26as THUMP domain containing 3 protein-coding common_peak2_88_469_0.456501422199189_9.10476765766459_6.36442174525179 chr11 98863047 98864789 + 6.36442174525179 NA intron (NM_197940, intron 1 of 7) CpG 320 NM_197940 68524 Mm.28661 NM_197940 ENSMUSG00000038013 Wipf2 1110014J05Rik|5730509C05Rik|AA407487|Gm1176|Wich|Wire WAS/WASL interacting protein family, member 2 protein-coding common_peak2_79_402_0.489722821475521_8.89949743926573_6.36369331639144 chr1 4785045 4786378 + 6.36369331639144 NA promoter-TSS (NR_033530) promoter-TSS (NR_033530) 15 NR_033530 27395 Mm.182927 NM_025300 ENSMUSG00000033845 Mrpl15 HSPC145|MRP-L7|Rpml7 mitochondrial ribosomal protein L15 protein-coding common_peak2_160_1621_-0.281561190858294_10.5227775087881_6.36344209555207 chr19 8722078 8724393 + 6.36344209555207 NA promoter-TSS (NR_002896) promoter-TSS (NR_002896) 134 NM_001161413 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak2_41_391_-0.610622889130353_8.30939839955003_6.36178821970599 chr4 150807619 150809482 + 6.36178821970599 NA Intergenic Intergenic 46399 NR_040649 73348 Mm.396218 NR_040649 ENSMUSG00000078492 1700045H11Rik - RIKEN cDNA 1700045H11 gene ncRNA unique_peak1_11_13_1.97980823484814_4.79725903948167_6.36167513896291 chr19 7293046 7293361 + 6.36167513896291 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) 2244 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak1_347_3011_0.189516398366637_11.6512642538552_6.36154220585558 chr14 70773768 70777618 + 6.36154220585558 NA exon (NM_010071, exon 2 of 5) exon (NM_010071, exon 2 of 5) 1312 NM_010071 13449 Mm.243323 NM_010071 ENSMUSG00000022102 Dok2 DokR|Frip docking protein 2 protein-coding common_peak2_95_523_0.433577088927358_9.25021154600113_6.36122122151505 chr5 36747792 36749274 + 6.36122122151505 NA exon (NM_133724, exon 1 of 1) exon (NM_133724, exon 1 of 1) 146 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding common_peak1_55_236_0.624433812306022_8.20096015505127_6.36062794362877 chr12 102357418 102358584 + 6.36062794362877 NA intron (NM_001161365, intron 4 of 9) intron (NM_001161365, intron 4 of 9) 74360 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_47_446_-0.563743241904866_8.52225940023088_6.35851530837933 chr18 70531911 70532984 + 6.35851530837933 NA Intergenic Intergenic -2126 NM_001289515 26447 Mm.244352 NM_011972 ENSMUSG00000038425 Poli Rad30b polymerase (DNA directed), iota protein-coding common_peak1_165_1677_-0.27640882008512_10.5743225903973_6.35687822764229 chr11 3122600 3124342 + 6.35687822764229 NA promoter-TSS (NR_003517) promoter-TSS (NR_003517) -550 NR_003517 236604 Mm.247625 NM_001004146 Pisd-ps1 - phosphatidylserine decarboxylase, pseudogene 1 pseudo common_peak2_67_639_-0.465167211540479_9.08934448911712_6.35571633218727 chr8 95887394 95888988 + 6.35571633218727 NA intron (NM_010325, intron 1 of 9) CpG 174 NM_010325 14719 Mm.230169 NM_010325 ENSMUSG00000031672 Got2 AL022787|FABP-pm|Got-2|Kyat4|mAspAT glutamatic-oxaloacetic transaminase 2, mitochondrial protein-coding common_peak2_134_844_0.347505622548368_9.89656034244373_6.35383918002281 chr11 86683001 86684877 + 6.35383918002281 NA promoter-TSS (NM_001098810) promoter-TSS (NM_001098810) -44 NM_175004 217057 Mm.24868 NM_175004 ENSMUSG00000072582 Ptrh2 A230072I16Rik|Bit1|CGI-147 peptidyl-tRNA hydrolase 2 protein-coding common_peak2_211_1561_0.259787649673845_10.7390725629789_6.35219737173836 chrY 90763498 90766834 + 6.35219737173836 NA Intergenic Intergenic -20276 NM_133362 170942 Mm.76062 NM_133362 ENSMUSG00000096768 Erdr1 edr erythroid differentiation regulator 1 protein-coding common_peak1_164_1112_0.305187657197241_10.2728317059406_6.35168464188629 chr16 42874422 42875386 + 6.35168464188629 NA intron (NR_040522, intron 1 of 1) intron (NR_040522, intron 1 of 1) 683 NR_040521 75722 Mm.243747 NR_040521 ENSMUSG00000075070 4932412D23Rik ENSMUSG00000075070|Gm10809 RIKEN cDNA 4932412D23 gene ncRNA common_peak2_40_381_-0.615985562970322_8.26943604655059_6.35143426746503 chr1 180903686 180905093 + 6.35143426746503 NA 5' UTR (NM_133705, exon 1 of 7) 5' UTR (NM_133705, exon 1 of 7) 115 NM_133705 69051 Mm.274180 NM_133705 ENSMUSG00000026520 Pycr2 1810018M05Rik|P5cr2 pyrroline-5-carboxylate reductase family, member 2 protein-coding common_peak1_57_249_0.609491341036838_8.27052995518051_6.35143426746493 chr13 38204722 38205563 + 6.35143426746493 NA intron (NM_026382, intron 1 of 8) CpG 203 NM_026382 67797 Mm.250783 NM_026382 ENSMUSG00000021431 Snrnp48 1110050F08Rik|6530403A03Rik|C6orf151 small nuclear ribonucleoprotein 48 (U11/U12) protein-coding common_peak1_41_151_0.75615944154127_7.62600723421422_6.35025342330871 chr16 17759225 17760128 + 6.35025342330871 NA promoter-TSS (NM_145479) promoter-TSS (NM_145479) 55 NM_145479 224023 Mm.282807 NM_145479 ENSMUSG00000022750 Klhl22 2610318I18Rik|Kelchl kelch-like 22 protein-coding common_peak2_258_2770_-0.212871235004535_11.3297553779791_6.35011775878923-2 chr9 21001973 21004642 + 6.35011775878923 NA exon (NM_023167, exon 3 of 9) exon (NM_023167, exon 3 of 9) 570 NM_023167 66163 Mm.427576 NM_023167 ENSMUSG00000003299 Mrpl4 1110017G11Rik mitochondrial ribosomal protein L4 protein-coding common_peak2_258_2770_-0.212871235004535_11.3297553779791_6.35011775878923 chr13 54207929 54211529 + 6.35011775878923 NA intron (NM_001010973, intron 1 of 2) intron (NM_001010973, intron 1 of 2) 17600 NM_008286 15466 Mm.57243 NM_008286 ENSMUSG00000034987 Hrh2 - histamine receptor H2 protein-coding common_peak1_77_738_-0.429874793351933_9.31449315747019_6.34985667776729 chr17 78417264 78418141 + 6.34985667776729 NA intron (NM_001285949, intron 1 of 7) CpG 450 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_61_580_-0.489099837483867_8.9378444346626_6.34915708528746 chr8 86870200 86871351 + 6.34915708528746 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 14483 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_136_1356_-0.309867448883995_10.2512712809769_6.34769299120589 chr15 99724709 99726976 + 6.34769299120589 NA TTS (NM_010271) TTS (NM_010271) 224 NM_183256 66379 Mm.5265 NM_183256 ENSMUSG00000023020 Cox14 2310016M24Rik|AA959804 cytochrome c oxidase assembly protein 14 protein-coding common_peak2_109_634_0.397290547912743_9.5092580556159_6.34767897793351 chr12 3806418 3808888 + 6.34767897793351 NA intron (NM_001271753, intron 1 of 22) GC_rich|Low_complexity|Low_complexity 493 NM_001271753 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding common_peak1_491_4726_0.152093254232772_12.282755776475_6.34734230407359 chr6 56796049 56798754 + 6.34734230407359 NA intron (NM_145958, intron 1 of 3) CpG 412 NM_145958 210973 Mm.57295 NM_145958 ENSMUSG00000059486 Kbtbd2 BC022962|Bklhd1|mKIAA1489 kelch repeat and BTB (POZ) domain containing 2 protein-coding unique_peak1_18_37_1.35243668995331_5.92414585842024_6.34732844805782 chr1 59316158 59316546 + 6.34732844805782 NA intron (NM_001033373, intron 10 of 13) intron (NM_001033373, intron 10 of 13) 59445 NM_001033373 271697 Mm.297713 NM_001033373 ENSMUSG00000026023 Cdk15 Als2cr7|Pftk2 cyclin-dependent kinase 15 protein-coding unique_peak1_18_37_1.35243668995331_5.92414585842024_6.34732844805782-2 chr18 80589973 80590348 + 6.34732844805782 NA Intergenic Intergenic -45614 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak1_18_37_1.35243668995331_5.92414585842024_6.34732844805782-3 chr6 148436588 148437075 + 6.34732844805782 NA intron (NM_198967, intron 1 of 19) intron (NM_198967, intron 1 of 19) 7521 NM_198967 387314 Mm.137858 NM_198967 ENSMUSG00000030306 Tmtc1 Arg99|BC023818 transmembrane and tetratricopeptide repeat containing 1 protein-coding common_peak1_18_37_1.35243668995331_5.92414585842024_6.34732844805782 chr2 165861082 165861361 + 6.34732844805782 NA intron (NM_001291158, intron 2 of 23) intron (NM_001291158, intron 2 of 23) -3048 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_35_117_0.848654623697182_7.30697036121043_6.34339648476842-2 chr1 91024154 91025018 + 6.34339648476842 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) 25859 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_35_117_0.848654623697182_7.30697036121043_6.34339648476842 chr1 38777614 38778525 + 6.34339648476842 NA Intergenic L1MC3|LINE|L1 43146 NM_001029878 381338 Mm.487137 NM_028403 ENSMUSG00000048814 Lonrf2 2900060P06Rik|AI851349 LON peptidase N-terminal domain and ring finger 2 protein-coding common_peak1_75_717_-0.434251208053448_9.27071442979633_6.3430873800715 chr11 74897334 74898614 + 6.3430873800715 NA promoter-TSS (NM_177325) promoter-TSS (NM_177325) -106 NM_177325 104662 Mm.220843 NM_177325 ENSMUSG00000038335 Tsr1 AU040765|AW550801|mKIAA1401 TSR1 20S rRNA accumulation protein-coding common_peak2_75_717_-0.434251208053448_9.27071442979633_6.3430873800715 chr13 48512691 48514038 + 6.3430873800715 NA promoter-TSS (NM_001164576) promoter-TSS (NM_001164576) 46 NM_001164575 67911 Mm.251375 NM_026450 ENSMUSG00000050954 Zfp169 1700025J14Rik|4930429A13Rik|BE688704 zinc finger protein 169 protein-coding common_peak2_173_1196_0.294202704908706_10.3723087893979_6.34211549291176 chr7 104352066 104354241 + 6.34211549291176 NA intron (NM_175677, intron 1 of 7) intron (NM_175677, intron 1 of 7) 196 NM_175677 319236 Mm.425502 NM_175677 ENSMUSG00000057143 Trim12c 9230105E10Rik|Trim12-2 tripartite motif-containing 12C protein-coding common_peak2_138_1377_-0.30637539191169_10.2751724767484_6.34193222819561 chr18 9957174 9958986 + 6.34193222819561 NA promoter-TSS (NM_153552) promoter-TSS (NM_153552) -100 NM_153552 225160 Mm.219648 NM_153552 ENSMUSG00000024287 Thoc1 3110002N20Rik|AW107452|NMP-84 THO complex 1 protein-coding common_peak1_428_4951_-0.157470736478553_12.195060230975_6.34189027469762 chr3 95671838 95676344 + 6.34189027469762 NA Intergenic Intergenic 13826 NM_144899 229595 Mm.490574 NM_144899 ENSMUSG00000015850 Adamtsl4 ADAMTSL-4|Tsrc1 ADAMTS-like 4 protein-coding common_peak1_23_228_-0.825428320004849_7.42648962809452_6.34140304035897 chr11 87853223 87853835 + 6.34140304035897 NA intron (NM_001039684, intron 1 of 17) intron (NM_001039684, intron 1 of 17) 304 NM_001039684 380718 Mm.24404 NM_001039684 ENSMUSG00000034121 Mks1 AK190930|B8d3 Meckel syndrome, type 1 protein-coding common_peak1_34_326_-0.671701110974549_8.01729627001081_6.34124613755583 chr3 51483415 51483953 + 6.34124613755583 NA promoter-TSS (NM_016858) promoter-TSS (NM_016858) -282 NM_016858 19338 Mm.1664 NM_016858 ENSMUSG00000027739 Rab33b - RAB33B, member RAS oncogene family protein-coding common_peak1_122_1204_-0.329239649898614_10.070197606168_6.33999360062142 chr6 47835666 47836647 + 6.33999360062142 NA intron (NM_173034, intron 1 of 4) CpG 495 NM_027477 272347 Mm.169059 NM_027477 ENSMUSG00000062519 Zfp398 5730513I23Rik zinc finger protein 398 protein-coding unique_peak2_22_220_-0.849441755297922_7.36318168174247_6.33975382167057 chr2 70964343 70965576 + 6.33975382167057 NA 3' UTR (NM_001110512, exon 9 of 9) 3' UTR (NM_001110512, exon 9 of 9) 53415 NM_001110512 228019 Mm.490343 NM_145524 ENSMUSG00000041975 Mettl8 BC004636|Tip methyltransferase like 8 protein-coding common_peak2_22_220_-0.849441755297922_7.36318168174247_6.33975382167057 chrX 140956106 140956770 + 6.33975382167057 NA intron (NM_016883, intron 1 of 4) intron (NM_016883, intron 1 of 4) 273 NM_016883 53380 Mm.17640 NM_016883 ENSMUSG00000031429 Psmd10 AW554874 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 protein-coding common_peak1_36_123_0.825587340824535_7.36698998079914_6.33975382167057-2 chr4 134651868 134652626 + 6.33975382167057 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 52043 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak1_36_123_0.825587340824535_7.36698998079914_6.33975382167057 chr10 93430782 93431512 + 6.33975382167057 NA Intergenic Intergenic -1960 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA unique_peak2_9_108_-1.30366240833251_6.11635312061067_6.3390473269665-2 chr4 7171753 7172885 + 6.3390473269665 NA Intergenic Intergenic -181596 NM_145711 252838 Mm.435828 NM_145711 ENSMUSG00000041272 Tox 1700007F02Rik thymocyte selection-associated high mobility group box protein-coding unique_peak2_9_108_-1.30366240833251_6.11635312061067_6.3390473269665 chr10 62533089 62533991 + 6.3390473269665 NA Intergenic RMER2|LTR|ERV1 -25785 NM_011157 19073 Mm.338790 NM_011157 ENSMUSG00000020077 Srgn Prg|Prg1|Sgc serglycin protein-coding common_peak1_540_5342_0.143377531628133_12.4551230676368_6.33877538200877 chr9 44603024 44606183 + 6.33877538200877 NA promoter-TSS (NM_007841) promoter-TSS (NM_007841) -289 NM_001110826 13209 Mm.267061 NM_007841 ENSMUSG00000032097 Ddx6 1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein-coding common_peak2_52_217_0.647557440666186_8.09196304511002_6.33489005056931 chr1 53888943 53890117 + 6.33489005056931 NA intron (NM_001001883, intron 15 of 28) intron (NM_001001883, intron 15 of 28) 40106 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA common_peak1_52_217_0.647557440666186_8.09196304511002_6.33489005056931 chr3 40893429 40894117 + 6.33489005056931 NA promoter-TSS (NM_026622) promoter-TSS (NM_026622) -504 NM_026622 269423 Mm.32373 NM_026622 ENSMUSG00000037818 Abhd18 2310068E01Rik|3110057O12Rik|AI645591 abhydrolase domain containing 18 protein-coding common_peak2_228_2408_-0.228750783480297_11.1198432864983_6.33448954144044 chr11 115534526 115537385 + 6.33448954144044 NA intron (NM_133354, intron 1 of 3) CpG 275 NM_133354 170930 Mm.29923 NM_133354 ENSMUSG00000020738 Sumo2 SUMO-2|Smt3A|Smt3b|Smt3h2 small ubiquitin-like modifier 2 protein-coding common_peak2_40_145_0.771618706185408_7.57563391197272_6.33333463890605 chr14 67911457 67912573 + 6.33333463890605 NA intron (NM_177780, intron 1 of 51) intron (NM_177780, intron 1 of 51) 21557 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding common_peak2_40_145_0.771618706185408_7.57563391197272_6.33333463890605-2 chr15 79027765 79028842 + 6.33333463890605 NA promoter-TSS (NM_008197) promoter-TSS (NM_008197) 91 NM_008197 14958 Mm.24350 NM_008197 ENSMUSG00000096210 H1f0 D130017D06Rik|H1(0)|H1fv H1 histone family, member 0 protein-coding unique_peak2_40_145_0.771618706185408_7.57563391197272_6.33333463890605 chr1 195001290 195002421 + 6.33333463890605 NA Intergenic Intergenic -15544 NR_015566 320977 Mm.99905 NR_015566 ENSMUSG00000096929 A330023F24Rik C030002C11Rik RIKEN cDNA A330023F24 gene ncRNA common_peak2_137_871_0.341023306656224_9.93869597810504_6.3324377155334 chr2 119674359 119675926 + 6.3324377155334 NA promoter-TSS (NM_030112) promoter-TSS (NM_030112) 74 NM_030112 76246 Mm.33437 NM_030112 ENSMUSG00000027304 Rtf1 2900005O08Rik|6530416A09Rik|AI853581|AU043144|AW553985|Gtl7|cbp82 RTF1, Paf1/RNA polymerase II complex component protein-coding common_peak2_101_570_0.416936152950969_9.36581501183833_6.33171263491888-2 chr8 86863442 86865813 + 6.33171263491888 NA intron (NM_030563, intron 1 of 6) intron (NM_030563, intron 1 of 6) 20631 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_101_570_0.416936152950969_9.36581501183833_6.33171263491888 chr5 3927688 3929170 + 6.33171263491888 NA 5' UTR (NM_194462, exon 1 of 48) 5' UTR (NM_194462, exon 1 of 48) 243 NM_194462 100986 Mm.46044 NM_194462 ENSMUSG00000040407 Akap9 5730481H23Rik|AKAP-9|AKAP450|AW545847|C79026|G1-448-15|PRKA9|mKIAA0803|mei2-5|repro12 A kinase (PRKA) anchor protein (yotiao) 9 protein-coding common_peak2_68_648_-0.459479347752344_9.11233499412297_6.33166690815342 chr17 32890728 32892286 + 6.33166690815342 NA promoter-TSS (NM_207245) promoter-TSS (NM_207245) 96 NM_207245 240066 Mm.26636 NM_207245 ENSMUSG00000095325 Zfp870 AI173952 zinc finger protein 870 protein-coding common_peak1_56_531_-0.510783715951016_8.79989057752568_6.32846988507501 chr17 27374621 27375783 + 6.32846988507501 NA Intergenic Intergenic 17105 NR_106077 102466228 NR_106077 ENSMUSG00000106215 Mir7218 mmu-mir-7218 microRNA 7218 ncRNA common_peak1_94_910_-0.38283745352684_9.63988851703863_6.3268309220973 chr2 60018539 60019963 + 6.3268309220973 NA intron (NM_001001182, intron 2 of 35) intron (NM_001001182, intron 2 of 35) 106489 NM_001001182 407823 Mm.228071 NM_001001182 ENSMUSG00000026987 Baz2b 5830435C13Rik|BC053917|D2Ertd794e bromodomain adjacent to zinc finger domain, 2B protein-coding common_peak2_129_802_0.354270654001938_9.82639150451828_6.32671368702305 chr4 123282430 123284541 + 6.32671368702305 NA 5' UTR (NM_130881, exon 1 of 15) 5' UTR (NM_130881, exon 1 of 15) 200 NM_148917 230721 Mm.277091 NM_130881 ENSMUSG00000011257 Pabpc4 - poly(A) binding protein, cytoplasmic 4 protein-coding common_peak1_98_951_-0.373363299493779_9.70813611356105_6.32660501271218 chr3 21935481 21936795 + 6.32660501271218 NA Intergenic Intergenic -140514 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_33_317_-0.682734383123828_7.97151576372244_6.32624860121104 chr1 155049541 155050126 + 6.32624860121104 NA Intergenic ID_B1|SINE|B4 49803 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak2_254_1999_0.22999207934369_11.0807803243339_6.32504533904866 chr14 61646750 61649935 + 6.32504533904866 NA intron (NR_028264, intron 1 of 6) CpG -16232 NR_029733 387174 NR_029733 ENSMUSG00000093007 Mir15a Mirn15a|mir-15a|mmu-mir-15a microRNA 15a ncRNA common_peak1_16_168_-0.997343175308012_6.90220784862818_6.32469505682911 chr1 171360840 171361264 + 6.32469505682911 NA promoter-TSS (NM_001033039) promoter-TSS (NM_001033039) -254 NM_001033039 68874 Mm.10756 NM_001033039 ENSMUSG00000045259 Klhdc9 1190002J23Rik|AA087357|ESTM31 kelch domain containing 9 protein-coding common_peak1_14_151_-1.06588339203224_6.71498581742747_6.32428074760514 chr1 92515192 92515550 + 6.32428074760514 NA intron (NM_147039, intron 1 of 1) intron (NM_147039, intron 1 of 1) 3144 NM_147039 259041 Mm.223424 NM_147039 ENSMUSG00000042849 Olfr1414 MOR103-2 olfactory receptor 1414 protein-coding unique_peak2_14_151_-1.06588339203224_6.71498581742747_6.32428074760514 chr17 47368486 47369490 + 6.32428074760514 NA promoter-TSS (NM_183086) promoter-TSS (NM_183086) 101 NM_001146211 64657 Mm.216250 NM_183086 ENSMUSG00000034729 Mrps10 1110038B19Rik|AW743084|Rpms10 mitochondrial ribosomal protein S10 protein-coding common_peak2_160_1620_-0.280671462158562_10.5223326444383_6.32324706365337 chr4 44166912 44169478 + 6.32324706365337 NA promoter-TSS (NM_001038993) promoter-TSS (NM_001038993) 88 NM_001038993 73469 Mm.262859 NM_175201 ENSMUSG00000035696 Rnf38 1700065B19Rik|2610202O07Rik|AA673263|Oip1 ring finger protein 38 protein-coding unique_peak2_7_92_-1.46951785916922_5.80439988152342_6.32288405974043 chr18 46997184 46997959 + 6.32288405974043 NA intron (NM_178377, intron 5 of 6) L1_Mur3|LINE|L1 38695 NM_178377 69456 Mm.210734 NM_178377 ENSMUSG00000042705 Commd10 2310003A05Rik|AU019438|DRWMS2 COMM domain containing 10 protein-coding unique_peak2_7_92_-1.46951785916922_5.80439988152342_6.32288405974043-2 chr6 116506277 116506926 + 6.32288405974043 NA promoter-TSS (NM_001011800) promoter-TSS (NM_001011800) 85 NM_001011800 258019 Mm.67253 NM_001011800 ENSMUSG00000053251 Olfr212 4931403F16Rik|MOR119-4 olfactory receptor 212 protein-coding unique_peak2_7_92_-1.46951785916922_5.80439988152342_6.32288405974043-3 chr7 44405186 44406103 + 6.32288405974043 NA Intergenic Intergenic 21518 NM_016663 20981 Mm.4824 NM_016663 ENSMUSG00000030731 Syt3 AI385753|sytIII synaptotagmin III protein-coding common_peak1_70_338_0.528018082710673_8.66915050449168_6.32165681511822 chrX 109094812 109096036 + 6.32165681511822 NA promoter-TSS (NM_019989) promoter-TSS (NM_019989) 17 NM_019989 56726 Mm.260760 NM_019989 ENSMUSG00000031246 Sh3bgrl 1190008F14Rik SH3-binding domain glutamic acid-rich protein like protein-coding common_peak1_123_751_0.365317975429381_9.73724783939233_6.3170265090493 chr19 29047150 29048436 + 6.3170265090493 NA non-coding (NR_028360, exon 1 of 1) non-coding (NR_028360, exon 1 of 1) 109 NM_021299 56248 Mm.196067 NM_021299 ENSMUSG00000024782 Ak3 AA407498|AI506714|AK-3|Ak3l|Ak3l1|Akl3l adenylate kinase 3 protein-coding unique_peak2_8_100_-1.38013843206548_5.96814226671905_6.31666183167164 chr6 17634281 17635025 + 6.31666183167164 NA Intergenic Intergenic -2445 NM_007604 12343 Mm.392504 NM_007604 ENSMUSG00000015733 Capza2 1110053K06Rik|AW208808|Cappa2 capping protein (actin filament) muscle Z-line, alpha 2 protein-coding common_peak1_343_3833_-0.179070517855134_11.8150993627406_6.31512352046902 chr15 79899434 79902270 + 6.31512352046902 NA intron (NM_001160415, intron 5 of 8) MT2B|LTR|ERVL -7714 NR_030675 109361 Mm.394656 NR_030675 D730005E14Rik - RIKEN cDNA D730005E14 gene ncRNA common_peak1_99_961_-0.370653269260947_9.72456644913957_6.31453862323652 chr14 26969687 26970548 + 6.31453862323652 NA intron (NM_145221, intron 1 of 21) CpG 434 NM_145221 72993 Mm.202322 NM_145221 ENSMUSG00000040760 Appl1 2900057D21Rik|7330406P05Rik|AI585782|AW209077|BB022931|C88264|DIP13 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 protein-coding common_peak2_24_237_-0.80880257117156_7.49041647772216_6.31447365643267 chr17 25784932 25785991 + 6.31447365643267 NA promoter-TSS (NM_026897) promoter-TSS (NM_026897) -123 NM_026897 68977 Mm.29230 NM_026897 ENSMUSG00000061046 Haghl 1500017E18Rik|2810014I23Rik|C330022E15Rik hydroxyacylglutathione hydrolase-like protein-coding common_peak1_34_112_0.861266752108346_7.25081233846936_6.31371255360882 chr2 129174787 129175477 + 6.31371255360882 NA Intergenic (GGA)n|Simple_repeat|Simple_repeat 5541 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 OTTMUSG00000015420 expressed sequence AI847159 ncRNA common_peak1_60_570_-0.492827484315871_8.91093319320491_6.31352108667951 chr4 129574847 129575412 + 6.31352108667951 NA Intergenic Intergenic -1488 NM_001162433 16818 Mm.293753 NM_010693 ENSMUSG00000000409 Lck Hck-3|Lsk|Lskt|p56|p56Lck lymphocyte protein tyrosine kinase protein-coding common_peak2_193_1386_0.274198602226162_10.5748513734367_6.31343864855433 chr18 62177935 62180908 + 6.31343864855433 NA exon (NM_007420, exon 1 of 1) exon (NM_007420, exon 1 of 1) 560 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak1_88_848_-0.39660237478885_9.53131955615861_6.3132192419662 chr8 69996603 69997262 + 6.3132192419662 NA promoter-TSS (NM_145596) promoter-TSS (NM_145596) -548 NM_145596 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak2_124_759_0.364265170683757_9.75198819367283_6.31275570833294 chr2 68872863 68874882 + 6.31275570833294 NA intron (NM_172856, intron 1 of 9) intron (NM_172856, intron 1 of 9) 12315 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_361_3172_0.18418782074508_11.7237257162902_6.31260803663788 chr5 113770805 113773719 + 6.31260803663788 NA promoter-TSS (NM_016926) promoter-TSS (NM_016926) -550 NM_025526 66383 Mm.29497 NM_025526 ENSMUSG00000025825 Iscu 2310020H20Rik|AA407971|Nifu|Nifun iron-sulfur cluster assembly enzyme protein-coding common_peak2_68_324_0.538299412330979_8.61344561408131_6.3113112872399 chr8 22397979 22399238 + 6.3113112872399 NA promoter-TSS (NM_181325) promoter-TSS (NM_181325) 13 NM_181325 18408 Mm.200907 NM_181325 ENSMUSG00000031482 Slc25a15 D630044L02Rik|Ornt1 solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 protein-coding common_peak1_26_254_-0.772145870019263_7.60828050184923_6.31070266827449 chr16 78538410 78538967 + 6.31070266827449 NA Intergenic Intergenic -21628 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak2_135_1344_-0.310017262910746_10.2383818259886_6.30933908877828 chr13 41370330 41374136 + 6.30933908877828 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -13232 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_135_1344_-0.310017262910746_10.2383818259886_6.30933908877828 chr9 121709798 121711297 + 6.30933908877828 NA intron (NM_026794, intron 1 of 2) CpG 158 NM_026794 26901 Mm.24848 NM_026794 ENSMUSG00000032526 Ss18l2 1110020I04Rik|AI463209|Deb1 SS18, nBAF chromatin remodeling complex subunit like 2 protein-coding common_peak1_51_484_-0.539807381247202_8.65193724645089_6.30783899661661 chr5 76304036 76304973 + 6.30783899661661 NA promoter-TSS (NM_007715) promoter-TSS (NM_007715) 44 NM_007715 12753 Mm.3552 NM_007715 ENSMUSG00000029238 Clock 5330400M04Rik|KAT13D circadian locomotor output cycles kaput protein-coding common_peak2_53_502_-0.525594711779576_8.71161723391574_6.30684068928108 chr13 23756706 23757846 + 6.30684068928108 NA exon (NM_178193, exon 1 of 1) exon (NM_178193, exon 1 of 1) 339 NM_178193 326620 Mm.261642 NM_178193 ENSMUSG00000069266 Hist1h4b - histone cluster 1, H4b protein-coding common_peak1_190_1358_0.276041765219404_10.5463506233771_6.30594146745838 chr14 66188851 66191943 + 6.30594146745838 NA intron (NM_172498, intron 2 of 29) L2b|LINE|L2 23155 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak2_10_117_-1.24945761785425_6.25791424043472_6.30563463100426 chr12 34806192 34807349 + 6.30563463100426 NA intron (NM_001271386, intron 3 of 27) intron (NM_001271386, intron 3 of 27) 110325 NM_001271386 79221 Mm.310551 NM_024124 ENSMUSG00000004698 Hdac9 AV022454|D030072B18Rik|HD7B|HD9|HDRP|Hdac7b|Mitr|mKIAA0744 histone deacetylase 9 protein-coding common_peak1_104_1013_-0.360261706326522_9.80571108384008_6.30558716674339 chr6 48718744 48720092 + 6.30558716674339 NA intron (NM_146167, intron 1 of 1) intron (NM_146167, intron 1 of 1) 797 NM_146167 231932 Mm.30479 NM_146167 ENSMUSG00000043931 Gimap7 IAN7|Ian3 GTPase, IMAP family member 7 protein-coding common_peak2_143_924_0.331212740028061_10.0189159254177_6.30455927327023 chr10 93334894 93337786 + 6.30455927327023 NA non-coding (NR_038014, exon 1 of 3) non-coding (NR_038014, exon 1 of 3) 108 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak1_31_299_-0.705953116184357_7.8758421324037_6.30421849114592-2 chr3 131056756 131057403 + 6.30421849114592 NA Intergenic Intergenic -53218 NM_010703 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak1_31_299_-0.705953116184357_7.8758421324037_6.30421849114592 chr13 95719346 95720101 + 6.30421849114592 NA intron (NM_027711, intron 11 of 35) intron (NM_027711, intron 11 of 35) 22803 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak1_23_58_1.13113241873025_6.44820925872697_6.30415501775662 chr9 48819095 48819578 + 6.30415501775662 NA intron (NM_001033324, intron 2 of 6) intron (NM_001033324, intron 2 of 6) 16609 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding common_peak2_162_1095_0.305812360960843_10.2509382634409_6.30381818730937 chr1 36708630 36710719 + 6.30381818730937 NA intron (NM_146107, intron 1 of 10) CpG 251 NM_146107 226977 Mm.28521 NM_146107 ENSMUSG00000037351 Actr1b 2310066K23Rik|AA960180|AI851923|Arp1b ARP1 actin-related protein 1B, centractin beta protein-coding common_peak2_420_3863_0.167133865016247_11.9994463113439_6.3029817738092 chr1 85792858 85796531 + 6.3029817738092 NA intron (NM_133781, intron 1 of 8) intron (NM_133781, intron 1 of 8) 1247 NM_133781 12283 Mm.26135 NM_133781 ENSMUSG00000036707 Cab39 AA408805|AA960512|C78372|MO25|MO25alpha calcium binding protein 39 protein-coding common_peak1_92_889_-0.38684480496617_9.60423912337068_6.30251762074407 chr10 120112205 120113539 + 6.30251762074407 NA promoter-TSS (NM_080446) promoter-TSS (NM_080446) 93 NM_080446 117599 Mm.214703 NM_080446 ENSMUSG00000020228 Helb AI447783|D10Ertd664e helicase (DNA) B protein-coding common_peak2_150_1508_-0.290856705541131_10.4139487377561_6.30227817231082 chr5 140621615 140624793 + 6.30227817231082 NA 3' UTR (NM_175274, exon 14 of 14) 3' UTR (NM_175274, exon 14 of 14) 15863 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_665_6980_0.125446998577829_12.8319414954154_6.30218390960696 chr4 135872571 135877984 + 6.30218390960696 NA Intergenic B3|SINE|B2 -1431 NM_026383 52830 Mm.29159 NM_026383 ENSMUSG00000028675 Pnrc2 0610011E17Rik|D4Bwg0593e proline-rich nuclear receptor coactivator 2 protein-coding common_peak2_274_2964_-0.204419784169129_11.4316064973488_6.30163196758503 chr16 93813984 93817741 + 6.30163196758503 NA Intergenic Intergenic -16259 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding unique_peak2_27_263_-0.757829369340529_7.66547943468819_6.30072175209678 chr7 80370170 80371838 + 6.30072175209678 NA intron (NM_172903, intron 1 of 23) CpG-13291 371 NM_172903 140481 Mm.269245 NM_172903 ENSMUSG00000038886 Man2a2 1700052O22Rik|4931438M07Rik|AI480988|MX|Man IIx mannosidase 2, alpha 2 protein-coding common_peak1_27_263_-0.757829369340529_7.66547943468819_6.30072175209678 chr10 26374936 26375519 + 6.30072175209678 NA promoter-TSS (NM_172787) promoter-TSS (NM_172787) -42 NM_172787 237339 Mm.338439 NM_172787 ENSMUSG00000039089 L3mbtl3 AI481284|MBT-1 l(3)mbt-like 3 (Drosophila) protein-coding common_peak1_503_4877_0.149372050714664_12.3267600681535_6.30052195904969 chr9 63704518 63709437 + 6.30052195904969 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 51017 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_22_54_1.15710109056885_6.35991025880909_6.29966281963511 chr2 50295571 50296063 + 6.29966281963511 NA promoter-TSS (NR_040361) promoter-TSS (NR_040361) 860 NM_133839 109129 Mm.29214 NM_133839 ENSMUSG00000026766 Mmadhc 2010311D03Rik|AI314967|CblD methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria protein-coding common_peak2_168_1150_0.29914173039718_10.3182429833308_6.29951289316034 chr2 39225322 39226781 + 6.29951289316034 NA intron (NM_024209, intron 1 of 6) CpG 287 NM_024209 67857 Mm.389242 NM_024209 ENSMUSG00000026753 Ppp6c 2310003C10Rik protein phosphatase 6, catalytic subunit protein-coding common_peak1_220_1652_0.251670166756691_10.8167060926707_6.29856515897719 chr19 11911476 11913415 + 6.29856515897719 NA promoter-TSS (NM_172635) promoter-TSS (NM_172635) 46 NM_172635 225929 Mm.42711 NM_172635 ENSMUSG00000046139 Patl1 AV312086|Pat1b protein associated with topoisomerase II homolog 1 (yeast) protein-coding common_peak1_30_290_-0.718193138173977_7.82577877382129_6.29774228310565 chr9 124037117 124037751 + 6.29774228310565 NA Intergenic Intergenic 15463 NM_009914 12771 Mm.57050 NM_009914 ENSMUSG00000035448 Ccr3 CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3 chemokine (C-C motif) receptor 3 protein-coding common_peak2_30_290_-0.718193138173977_7.82577877382129_6.29774228310565 chr15 82243960 82245206 + 6.29774228310565 NA promoter-TSS (NM_001080158) promoter-TSS (NM_001080158) 164 NM_178269 66570 Mm.23596 NM_025639 ENSMUSG00000068101 Cenpm 2610019I03Rik|AI853711|Pane1 centromere protein M protein-coding common_peak2_91_493_0.443318194881545_9.17002632902545_6.29695459327333 chr1 192069596 192071501 + 6.29695459327333 NA exon (NM_011633, exon 2 of 10) exon (NM_011633, exon 2 of 10) 22051 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak2_55_521_-0.514728935365603_8.77054152888708_6.2966779276896 chr7 12961269 12962622 + 6.2966779276896 NA Intergenic Intergenic -3919 NM_178732 243834 Mm.133086 NM_178732 ENSMUSG00000004500 Zfp324 A930002M05|D430030K24Rik|ZF5128 zinc finger protein 324 protein-coding common_peak1_28_272_-0.744093826407284_7.72071022771621_6.29557274937578 chr10 12875232 12875907 + 6.29557274937578 NA Intergenic MTE2b|LTR|ERVL-MaLR -13834 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_43_163_0.728858049262223_7.7219810292492_6.29557274937573 chr4 123139092 123140090 + 6.29557274937573 NA intron (NM_019489, intron 1 of 9) intron (NM_019489, intron 1 of 9) 350 NM_019489 56031 Mm.126873 NM_019489 ENSMUSG00000028651 Ppie 2010010D16Rik|Cyp33 peptidylprolyl isomerase E (cyclophilin E) protein-coding unique_peak2_25_246_-0.792945986943746_7.5518942381128_6.29439309818746-2 chr8 111521617 111522740 + 6.29439309818746 NA promoter-TSS (NM_001170743) promoter-TSS (NM_001170743) -71 NM_176923 319481 Mm.247294 NM_176923 ENSMUSG00000031959 Wdr59 5430401O09Rik|Cdw12 WD repeat domain 59 protein-coding unique_peak2_25_246_-0.792945986943746_7.5518942381128_6.29439309818746 chr5 116028500 116029794 + 6.29439309818746 NA Intergenic Intergenic -4719 NM_031869 19079 Mm.458152 NM_031869 ENSMUSG00000029513 Prkab1 1300015D22Rik|AU021155|E430008F22 protein kinase, AMP-activated, beta 1 non-catalytic subunit protein-coding common_peak1_25_246_-0.792945986943746_7.5518942381128_6.29439309818746-2 chr7 80232872 80233389 + 6.29439309818746 NA promoter-TSS (NM_011870) promoter-TSS (NM_011870) 237 NM_178752 269952 Mm.187733 NM_178752 ENSMUSG00000050973 Gdpgp1 D330012F22Rik GDP-D-glucose phosphorylase 1 protein-coding common_peak1_25_246_-0.792945986943746_7.5518942381128_6.29439309818746 chr1 191906045 191906523 + 6.29439309818746 NA promoter-TSS (NM_009579) promoter-TSS (NM_009579) -497 NM_009579 22782 Mm.9024 NM_009579 ENSMUSG00000037434 Slc30a1 AI839647|C130040I11Rik|Znt1 solute carrier family 30 (zinc transporter), member 1 protein-coding common_peak1_86_827_-0.400689126833472_9.49314239408259_6.29380110743843 chr6 146221451 146222887 + 6.29380110743843 NA intron (NM_019923, intron 45 of 56) intron (NM_019923, intron 45 of 56) 280054 NM_010586 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak2_101_981_-0.36529612600088_9.75693115131425_6.29195110577087 chr7 16780672 16784017 + 6.29195110577087 NA exon (NM_009201, exon 1 of 9) exon (NM_009201, exon 1 of 9) 998 NM_009201 20514 Mm.1056 NM_009201 ENSMUSG00000001918 Slc1a5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC|Slc1a7 solute carrier family 1 (neutral amino acid transporter), member 5 protein-coding common_peak2_67_638_-0.462911237600112_9.08821650214694_6.29190406256319 chr14 52304176 52305645 + 6.29190406256319 NA exon (NM_019721, exon 1 of 11) exon (NM_019721, exon 1 of 11) 214 NM_019721 56335 Mm.271759 NM_019721 ENSMUSG00000022160 Mettl3 2310024F18Rik|M6A|Spo8 methyltransferase like 3 protein-coding common_peak1_57_540_-0.504209158127891_8.82738020476287_6.29158262770679 chr3 65962773 65963745 + 6.29158262770679 NA Intergenic Intergenic -5034 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_57_540_-0.504209158127891_8.82738020476287_6.29158262770679-2 chr5 100416302 100417045 + 6.29158262770679 NA promoter-TSS (NM_026969) promoter-TSS (NM_026969) -439 NM_026969 69162 Mm.18634 NM_026969 ENSMUSG00000035325 Sec31a 1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1 Sec31 homolog A (S. cerevisiae) protein-coding common_peak1_19_41_1.29881680485202_6.04172582520477_6.2915227797032 chr2 29689886 29690421 + 6.2915227797032 NA intron (NM_054050, intron 5 of 23) intron (NM_054050, intron 5 of 23) 70433 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_62_283_0.571862040447101_8.43567813972823_6.29126501903498 chr4 21879188 21880271 + 6.29126501903498 NA promoter-TSS (NM_172687) promoter-TSS (NM_172687) 54 NM_172687 230027 Mm.5662 NM_172687 ENSMUSG00000028247 Coq3 4732433J24|C77934 coenzyme Q3 methyltransferase protein-coding common_peak1_95_524_0.430826477911323_9.25158685150915_6.29073343292098 chr5 36747756 36749225 + 6.29073343292098 NA exon (NM_133724, exon 1 of 1) exon (NM_133724, exon 1 of 1) 189 NM_133724 117197 Mm.46744 NM_133724 ENSMUSG00000060708 Bloc1s4 2610101N07Rik|Blos4|Cno biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino protein-coding common_peak1_77_737_-0.427921245266178_9.31351638342731_6.29047447033545 chr9 22467466 22468352 + 6.29047447033545 NA intron (NM_018739, intron 1 of 5) CpG 447 NM_018739 55934 Mm.38235 NM_018739 ENSMUSG00000032239 Rp9 PAP-1|Rp9h retinitis pigmentosa 9 (human) protein-coding common_peak2_63_598_-0.476934307290906_8.98794503914333_6.28968759281201 chr18 5603213 5604875 + 6.28968759281201 NA intron (NM_011546, intron 1 of 7) intron (NM_011546, intron 1 of 7) -11607 NR_033552 791318 Mm.84339 NR_033552 ENSMUSG00000063087 Gm10125 ENSMUSG00000063087|Zeb1os predicted gene 10125 ncRNA common_peak1_140_1398_-0.302914643585451_10.298722925372_6.28911670874042 chr10 95515081 95516079 + 6.28911670874042 NA intron (NM_080560, intron 1 of 3) CpG 418 NM_080560 93765 Mm.371667 NM_080560 ENSMUSG00000074781 Ube2n 1500026J17Rik|AL022654|BB101821|UBC13 ubiquitin-conjugating enzyme E2N protein-coding common_peak1_525_5154_0.145296618206343_12.4044050213586_6.2890478910462 chr8 47672965 47677132 + 6.2890478910462 NA 5' UTR (NM_023503, exon 1 of 2) 5' UTR (NM_023503, exon 1 of 2) 111 NM_023503 69260 Mm.430733 NM_023503 ENSMUSG00000063049 Ing2 2810011M06Rik|Ing1l|Ing2b|P33ING2 inhibitor of growth family, member 2 protein-coding common_peak1_85_447_0.464984559382701_9.03984720174896_6.28898354255225 chr7 139388912 139389763 + 6.28898354255225 NA 5' UTR (NM_183144, exon 1 of 16) 5' UTR (NM_183144, exon 1 of 16) 228 NM_001127363 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding common_peak2_33_107_0.875261069997059_7.192518037162_6.2874995565091 chr11 78887115 78887873 + 6.2874995565091 NA Intergenic Intergenic -33293 NM_010927 18126 Mm.2893 NM_010927 ENSMUSG00000020826 Nos2 MAC-NOS|NOS-II|Nos-2|Nos2a|i-NOS|iNOS nitric oxide synthase 2, inducible protein-coding common_peak2_80_767_-0.418620417728278_9.37565229185702_6.28646277428273 chr4 88756741 88758004 + 6.28646277428273 NA promoter-TSS (NM_001243150) promoter-TSS (NM_001243150) -472 NM_001243150 100041062 Mm.489587 NM_001243150 Gm13286 OTTMUSG00000011284 predicted gene 13286 protein-coding common_peak1_123_1214_-0.326833771386125_10.0833237128001_6.28443114071268 chr18 79292913 79294940 + 6.28443114071268 NA Intergenic Intergenic -184535 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak2_291_2393_0.210336211814838_11.3303755428509_6.28406408046536 chr6 134926250 134930469 + 6.28406408046536 NA promoter-TSS (NR_037956) promoter-TSS (NR_037956) -733 NR_037956 381822 Mm.5935 NR_037955 ENSMUSG00000098318 Lockd 1190002F15Rik|AI120476|Droc lncRNA downstream of Cdkn1b ncRNA common_peak2_617_6343_0.1311176554124_12.6967358834102_6.28318254638388 chr2 25192702 25198449 + 6.28318254638388 NA exon (NM_146115, exon 2 of 2) exon (NM_146115, exon 2 of 2) 1238 NM_146115 227612 Mm.119747 NM_146115 ENSMUSG00000059555 Tor4a A830007P12Rik torsin family 4, member A protein-coding common_peak2_60_270_0.582370409693102_8.37333424620042_6.28312656323691 chr9 67839804 67841019 + 6.28312656323691 NA promoter-TSS (NM_177184) promoter-TSS (NM_177184) 15 NM_177184 320528 Mm.241454 NM_177184 ENSMUSG00000035284 Vps13c AI552542|AV026040|C230055H22Rik|W51662|chorein vacuolar protein sorting 13C protein-coding unique_peak2_50_474_-0.544112926090854_8.61972724017288_6.2809085089585 chr3 146157851 146160352 + 6.2809085089585 NA intron (NM_001005846, intron 1 of 13) intron (NM_001005846, intron 1 of 13) 8927 NM_001005846 68279 Mm.116862 NM_026656 ENSMUSG00000011008 Mcoln2 3300002C04Rik|AI549968|C86638|TRPML2 mucolipin 2 protein-coding common_peak1_244_1896_0.235477860377529_11.0072428936002_6.28035869299942 chr8 40510811 40512621 + 6.28035869299942 NA promoter-TSS (NM_001271543) promoter-TSS (NM_001271543) 38 NM_001271543 18983 Mm.272551 NM_011135 ENSMUSG00000031601 Cnot7 AU022737|CAF-1|Caf1|Pop2 CCR4-NOT transcription complex, subunit 7 protein-coding unique_peak2_20_202_-0.887861273386679_7.22140528049184_6.28032730469478-2 chr8 72276861 72278251 + 6.28032730469478 NA Intergenic Intergenic 37424 NM_007456 11767 Mm.290086 NM_007456 ENSMUSG00000003033 Ap1m1 AA408894|AP47|Adtm1A|Cltnm|mu1A adaptor-related protein complex AP-1, mu subunit 1 protein-coding unique_peak2_20_202_-0.887861273386679_7.22140528049184_6.28032730469478 chr8 23028010 23029175 + 6.28032730469478 NA intron (NM_001277280, intron 1 of 42) intron (NM_001277280, intron 1 of 42) -6507 NM_001277281 11733 Mm.334444 NM_031158 ENSMUSG00000031543 Ank1 Ank-1|nb|pale ankyrin 1, erythroid protein-coding common_peak2_59_560_-0.496588216824733_8.88356285219643_6.27836595331228 chr15 80947679 80949177 + 6.27836595331228 NA promoter-TSS (NM_009634) promoter-TSS (NM_009634) -62 NM_009634 11564 Mm.38151 NM_009634 ENSMUSG00000022407 Adsl Adl|Asl adenylosuccinate lyase protein-coding common_peak1_59_560_-0.496588216824733_8.88356285219643_6.27836595331228 chr14 55091875 55092698 + 6.27836595331228 NA promoter-TSS (NM_001039198) promoter-TSS (NM_001039198) -238 NM_001039198 239102 Mm.441113 NM_001039198 ENSMUSG00000040721 Zfhx2 ZFH-5 zinc finger homeobox 2 protein-coding common_peak1_163_1653_-0.277075631733137_10.5532057033047_6.27800043583417 chr17 84333152 84335017 + 6.27800043583417 NA exon (NM_183021, exon 28 of 38) exon (NM_183021, exon 28 of 38) 132124 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak1_214_1593_0.255396843141799_10.7661343355614_6.27794162591428 chr12 80434413 80437148 + 6.27794162591428 NA intron (NM_177267, intron 1 of 8) intron (NM_177267, intron 1 of 8) 821 NM_177267 320808 Mm.220310 NM_177267 ENSMUSG00000049106 Dcaf5 9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22 DDB1 and CUL4 associated factor 5 protein-coding common_peak1_13_142_-1.09991889794682_6.60991188780498_6.27768197557519 chr9 22468482 22468834 + 6.27768197557519 NA promoter-TSS (NM_018739) promoter-TSS (NM_018739) -302 NM_018739 55934 Mm.38235 NM_018739 ENSMUSG00000032239 Rp9 PAP-1|Rp9h retinitis pigmentosa 9 (human) protein-coding common_peak1_133_1321_-0.311350450171613_10.2128312364219_6.27688574713424 chr6 71440842 71441767 + 6.27688574713424 NA promoter-TSS (NM_024288) promoter-TSS (NM_024288) -667 NM_024288 68477 Mm.28474 NM_024288 ENSMUSG00000002222 Rmnd5a 1110007A06Rik|AJ237586|AW125795|Gid2|MTA.D02.090 required for meiotic nuclear division 5 homolog A protein-coding common_peak1_295_2436_0.208730049047137_11.3552555602469_6.27655879881804 chr4 140951449 140953538 + 6.27655879881804 NA TTS (NM_008812) TTS (NM_008812) 5409 NR_045911 100126227 Mm.404073 NR_045911 ENSMUSG00000087698 Gm13031 OTTMUSG00000010081 predicted gene 13031 ncRNA common_peak2_70_667_-0.450544746627035_9.15843191916053_6.27641211532034 chr5 9086516 9088469 + 6.27641211532034 NA Intergenic MTD|LTR|ERVL-MaLR -13245 NM_001081029 652925 Mm.439954 NM_001081029 ENSMUSG00000079659 Tmem243 4930420K17Rik|E030031F02Rik transmembrane protein 243, mitochondrial protein-coding common_peak1_118_1160_-0.334079886625922_10.0141123135526_6.27463896653686 chr10 128502934 128504274 + 6.27463896653686 NA non-coding (NR_131151, exon 2 of 2) non-coding (NR_131151, exon 2 of 2) 4357 NR_131151 654440 Mm.441262 NR_131150 ENSMUSG00000097353 A430046D13Rik - Riken cDNA A430046D13 gene ncRNA unique_peak2_4_66_-1.82817958519971_5.15199939785792_6.27418910525458 chr12 52734412 52735039 + 6.27418910525458 NA intron (NM_198111, intron 1 of 13) IAPEz-int|LTR|ERVK 35342 NM_198111 238161 Mm.310822 NM_198111 ENSMUSG00000061603 Akap6 AI482140|Akapalpha|Akapbeta|PRKA A kinase (PRKA) anchor protein 6 protein-coding common_peak1_42_157_0.741946422076848_7.67475395921553_6.27157794526882 chr18 56736897 56737520 + 6.27157794526882 NA intron (NM_010721, intron 5 of 10) intron (NM_010721, intron 5 of 10) 29395 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak2_42_157_0.741946422076848_7.67475395921553_6.27157794526882 chr6 54594815 54595696 + 6.27157794526882 NA 5' UTR (NM_001164361, exon 1 of 14) 5' UTR (NM_001164361, exon 1 of 14) 144 NM_001164361 231999 Mm.35416 NM_001001335 ENSMUSG00000005225 Plekha8 6330400G01|AA517676|BC052360|Fapp-2|Fapp2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 protein-coding common_peak1_21_210_-0.861301446013234_7.29044846570057_6.27104960441922-3 chr19 34922329 34922819 + 6.27104960441922 NA intron (NM_183046, intron 1 of 31) intron (NM_183046, intron 1 of 31) 216 NM_183046 240641 Mm.278471 NM_183046 ENSMUSG00000024795 Kif20b 33cex|B130024C23|C330014J10Rik|Mphosph1|magoo kinesin family member 20B protein-coding common_peak1_21_210_-0.861301446013234_7.29044846570057_6.27104960441922-2 chr17 73247413 73247866 + 6.27104960441922 NA Intergenic Intergenic 139654 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding unique_peak2_21_210_-0.861301446013234_7.29044846570057_6.27104960441922 chr7 78853479 78854677 + 6.27104960441922 NA Intergenic Intergenic -6867 NM_029585 76375 Mm.250541 NM_029585 ENSMUSG00000030610 Det1 2610034H20Rik de-etiolated homolog 1 (Arabidopsis) protein-coding common_peak1_21_210_-0.861301446013234_7.29044846570057_6.27104960441922 chr1 128359809 128360357 + 6.27104960441922 NA promoter-TSS (NM_001313695) promoter-TSS (NM_001313695) -378 NM_001313695 17219 Mm.4933 NM_008567 ENSMUSG00000026355 Mcm6 ASP-l1|D1Wsu22e|Mcmd6 minichromosome maintenance complex component 6 protein-coding common_peak1_153_1014_0.316069839886884_10.145298932016_6.27077437896066 chr14 47472465 47473624 + 6.27077437896066 NA intron (NM_030236, intron 1 of 1) CpG 483 NM_001146085 78938 Mm.11935 NM_030236 ENSMUSG00000037536 Fbxo34 2900057B08Rik|5830426G16Rik F-box protein 34 protein-coding common_peak1_51_212_0.64732393560145_8.05837158802656_6.27074714336899 chr2 30689891 30690861 + 6.27074714336899 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -30834 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA unique_peak2_35_334_-0.656719612286112_8.05965747920208_6.27074714336889 chr7 48908108 48909652 + 6.27074714336889 NA Intergenic G-rich|Low_complexity|Low_complexity -27839 NM_001013368 108961 Mm.240566 NM_001013368 ENSMUSG00000046179 E2f8 4432406C08Rik|AA410048 E2F transcription factor 8 protein-coding common_peak1_36_344_-0.650668900454122_8.10511810143847_6.26962692903599 chr14 69804756 69805548 + 6.26962692903599 NA 5' UTR (NM_153514, exon 1 of 10) 5' UTR (NM_153514, exon 1 of 10) 393 NM_153514 246710 Mm.102367 NM_153514 ENSMUSG00000022075 Rhobtb2 Dbc2|E130206H14Rik|mKIAA0717 Rho-related BTB domain containing 2 protein-coding common_peak2_74_367_0.506587752232655_8.77685583217334_6.26944908073603 chr17 56506746 56508251 + 6.26944908073603 NA Intergenic Intergenic 4985 NM_011483 20834 Mm.76862 NM_011483 ENSMUSG00000044526 Znrf4 1700094M01Rik|Ssrzf1|spzn zinc and ring finger 4 protein-coding common_peak1_40_380_-0.612203922427896_8.26754522627937_6.26904542446009 chr1 54880919 54881708 + 6.26904542446009 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 45074 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_241_1866_0.236672943595602_10.984842684024_6.26546540221021 chr10 122678261 122681086 + 6.26546540221021 NA TTS (NR_106182) TTS (NR_106182) 358 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak2_32_102_0.890819420477661_7.13191023742205_6.26519662548787 chr19 46670944 46671735 + 6.26519662548787 NA intron (NM_007809, intron 1 of 7) intron (NM_007809, intron 1 of 7) 1661 NM_007809 13074 Mm.1262 NM_007809 ENSMUSG00000003555 Cyp17a1 Cyp17|p450c17 cytochrome P450, family 17, subfamily a, polypeptide 1 protein-coding common_peak1_32_102_0.890819420477661_7.13191023742205_6.26519662548787 chr11 70785656 70786265 + 6.26519662548787 NA Intergenic Intergenic 21513 NM_177565 193043 Mm.40966 NM_177565 ENSMUSG00000043602 Zfp3 AI854635|B230309J24|Fnp-1|Zfp-3 zinc finger protein 3 protein-coding common_peak1_101_571_0.414411751535424_9.3670772125461_6.26433101623157 chr5 65763893 65765148 + 6.26433101623157 NA intron (NM_001024917, intron 1 of 19) CpG 999 NM_001024917 333789 Mm.332398 NM_001024917 ENSMUSG00000037795 N4bp2 B3bp|E430014I16|Gm1791|Gm868 NEDD4 binding protein 2 protein-coding common_peak1_66_627_-0.464077048741904_9.06258222452067_6.26352273020132 chr11 60416496 60417083 + 6.26352273020132 NA promoter-TSS (NM_025757) promoter-TSS (NM_025757) 310 NM_145427 246782 Mm.41651 NM_145427 ENSMUSG00000042709 Atpaf2 ATP12|ATP12p ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding common_peak2_141_907_0.333223369742459_9.99316017216214_6.26116302929088 chr3 142619456 142621468 + 6.26116302929088 NA promoter-TSS (NM_010260) promoter-TSS (NM_010260) -201 NM_010260 14469 Mm.24038 NM_010260 ENSMUSG00000028270 Gbp2 - guanylate binding protein 2 protein-coding common_peak2_478_5625_-0.146478729606262_12.3846544725116_6.26080853154436 chr8 84062553 84069784 + 6.26080853154436 NA promoter-TSS (NM_009055) promoter-TSS (NM_009055) -668 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding common_peak2_300_3286_-0.19329246156089_11.5859095102999_6.2591510534509 chr19 5487240 5492429 + 6.2591510534509 NA promoter-TSS (NM_007687) promoter-TSS (NM_007687) -621 NM_007687 12631 Mm.329655 NM_007687 ENSMUSG00000056201 Cfl1 AA959946|Cof cofilin 1, non-muscle protein-coding common_peak2_225_2370_-0.22914813812325_11.0967058784204_6.25908589226692 chrX 12156385 12161050 + 6.25908589226692 NA intron (NR_045434, intron 1 of 3) CpG 1629 NR_045434 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_56_530_-0.50806933125398_8.79853338517716_6.25868270020211 chr2 32288215 32288948 + 6.25868270020211 NA promoter-TSS (NR_110965) promoter-TSS (NR_110965) 328 NM_001080968 99412 Mm.106376 NM_133852 ENSMUSG00000002546 Golga2 AW555139|GM130|mKIAA4150 golgi autoantigen, golgin subfamily a, 2 protein-coding common_peak2_56_530_-0.50806933125398_8.79853338517716_6.25868270020211 chr18 46200104 46201478 + 6.25868270020211 NA intron (NM_178872, intron 1 of 9) Lx8|LINE|L1 -1973 NM_001170855 28105 Mm.277382 NM_178872 ENSMUSG00000033949 Trim36 D18Wsu100e|haprin tripartite motif-containing 36 protein-coding common_peak1_206_1514_0.261627758039765_10.6959159573802_6.25656601913582 chr1 106795825 106797189 + 6.25656601913582 NA 5' UTR (NM_009190, exon 1 of 11) 5' UTR (NM_009190, exon 1 of 11) 218 NM_009190 20479 Mm.18705 NM_009190 ENSMUSG00000009907 Vps4b 8030489C12Rik|Skd1 vacuolar protein sorting 4B protein-coding common_peak2_15_159_-1.02567483176219_6.80909067900627_6.25553616313827 chr5 48371894 48372869 + 6.25553616313827 NA promoter-TSS (NM_025755) promoter-TSS (NM_025755) -11 NM_025755 66768 Mm.29409 NM_025755 ENSMUSG00000029089 Pacrgl 4933428G09Rik PARK2 co-regulated-like protein-coding common_peak1_15_159_-1.02567483176219_6.80909067900627_6.25553616313827 chr6 140231225 140231617 + 6.25553616313827 NA Intergenic L1M2|LINE|L1 189896 NM_007605 12344 Mm.12817 NM_007605 ENSMUSG00000041791 Capza3 510-4|Cappa3|Gsg3|Tex8|repro32 capping protein (actin filament) muscle Z-line, alpha 3 protein-coding unique_peak1_24_63_1.08601519213638_6.54300759606819_6.25398308118988 chr16 33400220 33400781 + 6.25398308118988 NA intron (NM_011749, intron 1 of 8) intron (NM_011749, intron 1 of 8) 19725 NM_011749 22661 Mm.392667 NM_011749 ENSMUSG00000022811 Zfp148 2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148 zinc finger protein 148 protein-coding common_peak1_16_30_1.4493399505873_5.67886628568052_6.25347418366123 chr19 11414375 11414797 + 6.25347418366123 NA intron (NM_029499, intron 1 of 6) intron (NM_029499, intron 1 of 6) 6925 NM_029499 64380 Mm.440715 NM_029499 ENSMUSG00000024675 Ms4a4c 5830413L19Rik|AI449185|Ms4a9 membrane-spanning 4-domains, subfamily A, member 4C protein-coding unique_peak1_16_30_1.4493399505873_5.67886628568052_6.25347418366123 chr1 165808008 165808418 + 6.25347418366123 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 19532 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding unique_peak1_16_30_1.4493399505873_5.67886628568052_6.25347418366123-2 chr14 79549301 79549800 + 6.25347418366123 NA intron (NM_001286411, intron 2 of 8) intron (NM_001286411, intron 2 of 8) 33876 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding unique_peak2_62_588_-0.480514663878678_8.96186649189112_6.25246013441224 chr13 114920874 114923534 + 6.25246013441224 NA intron (NM_008396, intron 1 of 29) intron (NM_008396, intron 1 of 29) 9837 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_62_588_-0.480514663878678_8.96186649189112_6.25246013441224 chr14 45350897 45351955 + 6.25246013441224 NA 5' UTR (NM_019637, exon 1 of 11) 5' UTR (NM_019637, exon 1 of 11) 240 NM_019637 56291 Mm.202561 NM_019637 ENSMUSG00000053205 Styx 0610039A20Rik|hStyxb serine/threonine/tyrosine interaction protein protein-coding common_peak1_34_325_-0.667282439707543_8.0150869343773_6.25235064371959 chr7 27933224 27934012 + 6.25235064371959 NA Intergenic Intergenic -4188 NM_028538 73430 Mm.379224 NM_028538 ENSMUSG00000070709 Zfp974 1700049G17Rik|AV321011|BB026409 zinc finger protein 974 protein-coding common_peak2_80_411_0.47984155580966_8.92642130508805_6.25196707591711 chr5 24038772 24040336 + 6.25196707591711 NA intron (NR_037304, intron 1 of 4) intron (NR_037304, intron 1 of 4) -8864 NM_053090 84652 Mm.304976 NM_053090 ENSMUSG00000028995 Fam126a AB030242|Drctnnb1a family with sequence similarity 126, member A protein-coding common_peak1_143_925_0.3296539121715_10.019695339346_6.25166168780548 chr14 79389908 79391606 + 6.25166168780548 NA promoter-TSS (NM_025832) promoter-TSS (NM_025832) -89 NM_025832 66897 Mm.24425 NM_025832 ENSMUSG00000022020 Naa16 1300019C06Rik|Narg1l N(alpha)-acetyltransferase 16, NatA auxiliary subunit protein-coding common_peak1_82_786_-0.410713956339139_9.41486284733792_6.25151377389887 chr11 19978665 19979939 + 6.25151377389887 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 54860 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak2_82_786_-0.410713956339139_9.41486284733792_6.25151377389887 chr17 34026668 34028458 + 6.25151377389887 NA TTS (NM_008202) TTS (NM_008202) 492 NM_013543 14979 Mm.275452 NM_013543 ENSMUSG00000073422 H2-Ke6 D17H6S112E|H-2Ke6|Hsd17b8|Ke-6|Ke6|Ring2 H2-K region expressed gene 6 protein-coding common_peak1_100_970_-0.366479291813734_9.74008783951232_6.25137879913544 chr10 80114509 80115482 + 6.25137879913544 NA promoter-TSS (NM_001301854) promoter-TSS (NM_001301854) -808 NM_001301853 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding common_peak2_117_702_0.374757837155647_9.64475979765036_6.25109022488082 chr5 111330059 111331558 + 6.25109022488082 NA 5' UTR (NM_001301666, exon 1 of 10) 5' UTR (NM_001301666, exon 1 of 10) 111 NM_001301666 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak2_26_72_1.03238300795958_6.70601606285981_6.25066028947451 chr10 61255759 61256506 + 6.25066028947451 NA intron (NM_001081127, intron 2 of 21) intron (NM_001081127, intron 2 of 21) 17306 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak2_64_608_-0.473383897573436_9.01360646911962_6.25056032221862 chr13 46338830 46341079 + 6.25056032221862 NA Intergenic ORR1D2|LTR|ERVL-MaLR 66233 NM_001005422 380842 Mm.188108 NM_001005422 ENSMUSG00000063529 Stmnd1 Gm1574 stathmin domain containing 1 protein-coding common_peak1_154_1552_-0.286054322774675_10.457814953_6.24907654599219 chr7 28819340 28822000 + 6.24907654599219 NA exon (NM_177301, exon 10 of 13) exon (NM_177301, exon 10 of 13) -4668 NM_016772 51798 Mm.291776 NM_016772 ENSMUSG00000053898 Ech1 AA617331 enoyl coenzyme A hydratase 1, peroxisomal protein-coding common_peak2_173_1198_0.291794198437985_10.3735130426332_6.24896927767667 chr11 60931293 60933228 + 6.24896927767667 NA promoter-TSS (NR_027800) promoter-TSS (NR_027800) 203 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding common_peak1_31_97_0.908155730196316_7.06878770921337_6.24732054149574 chr4 134126432 134126984 + 6.24732054149574 NA TTS (NR_045571) TTS (NR_045571) 2045 NM_080559 73723 Mm.22240 NM_080559 ENSMUSG00000028843 Sh3bgrl3 1110004L05Rik|AU022188 SH3 domain binding glutamic acid-rich protein-like 3 protein-coding common_peak1_18_184_-0.931017257119422_7.0658728319566_6.24732054149574 chr14 20884875 20885301 + 6.24732054149574 NA Intergenic Intergenic -44345 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak1_69_656_-0.45169153461244_9.13390379301611_6.24603319866107 chrX 94797373 94798534 + 6.24603319866107 NA non-coding (NR_003292, exon 1 of 1) non-coding (NR_003292, exon 1 of 1) 336 NR_003292 668171 Mm.426134 NR_003292 Zxda 4933406P09Rik|AW413531 zinc finger, X-linked, duplicated A pseudo common_peak1_12_133_-1.1372802570032_6.49744906195617_6.24470173229167 chr3 78966891 78967150 + 6.24470173229167 NA Intergenic CpG 177867 NM_001310536 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak1_14_23_1.59708162069019_5.38350331106625_6.24418022480551 chr4 16012934 16013337 + 6.24418022480551 NA intron (NM_145950, intron 1 of 5) intron (NM_145950, intron 1 of 5) 742 NM_145950 209212 Mm.46455 NM_145950 ENSMUSG00000041153 Osgin2 BC010311|C230027H09Rik oxidative stress induced growth inhibitor family member 2 protein-coding common_peak1_14_23_1.59708162069019_5.38350331106625_6.24418022480551-2 chr5 113160693 113161061 + 6.24418022480551 NA intron (NM_172884, intron 1 of 7) L1MA9|LINE|L1 2436 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak1_147_960_0.324615652810374_10.0707004471789_6.24159247791951 chr3 81932224 81933071 + 6.24159247791951 NA promoter-TSS (NM_177662) promoter-TSS (NM_177662) 31 NM_177662 229445 Mm.254642 NM_177662 ENSMUSG00000028015 Ctso A330105D01Rik|AI118514 cathepsin O protein-coding common_peak1_89_857_-0.392042888748557_9.54881239312527_6.24115961992371 chr6 57821985 57823063 + 6.24115961992371 NA intron (NM_146168, intron 1 of 4) intron (NM_146168, intron 1 of 4) 2601 NM_146168 232023 Mm.24642 NM_146168 ENSMUSG00000037788 Vopp1 AW146242|Ecop vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding common_peak2_415_3805_0.167810643112334_11.9779651678302_6.24099441197274 chr14 16363536 16366964 + 6.24099441197274 NA promoter-TSS (NM_009409) promoter-TSS (NM_009409) 44 NM_009409 21974 Mm.130362 NM_009409 ENSMUSG00000017485 Top2b D230016L12Rik|Top-2 topoisomerase (DNA) II beta protein-coding common_peak1_98_548_0.420792124808965_9.31105840140968_6.24065457983638 chr15 75133833 75135477 + 6.24065457983638 NA Intergenic Intergenic -20606 NM_001310438 546644 NM_008531 ENSMUSG00000022582 Ly6g Gr-1|Gr1|Ly-6G lymphocyte antigen 6 complex, locus G protein-coding common_peak2_74_706_-0.435416696519733_9.24785805654953_6.24013281940302 chr1 156039817 156041847 + 6.24013281940302 NA promoter-TSS (NM_001160181) promoter-TSS (NM_001160181) -29 NM_001160181 240832 Mm.253335 NM_022329 ENSMUSG00000050565 Tor1aip2 1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1 torsin A interacting protein 2 protein-coding common_peak1_363_3198_0.182164387977085_11.7344874711042_6.24009950555694 chr1 46852293 46854862 + 6.24009950555694 NA promoter-TSS (NM_172653) promoter-TSS (NM_172653) -68 NM_172653 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding common_peak2_61_277_0.574353443197156_8.40611779432209_6.23846351880801-2 chr7 4098343 4099871 + 6.23846351880801 NA intron (NR_033568, intron 5 of 8) ORR1B1|LTR|ERVL-MaLR -20423 NM_001109765 57776 Mm.29729 NM_021324 ENSMUSG00000030428 Ttyh1 4930459B04Rik|6330408P11Rik|TTY1|mTTY1|tty tweety family member 1 protein-coding common_peak2_61_277_0.574353443197156_8.40611779432209_6.23846351880801 chr6 148830644 148832103 + 6.23846351880801 NA promoter-TSS (NM_001081113) promoter-TSS (NM_001081113) 94 NM_001081113 320727 Mm.260105 NM_001081113 ENSMUSG00000040029 Ipo8 6230418K12Rik|Abcc10|C130009K11Rik|MRP7|OM-1|Om1|Ranbp8 importin 8 protein-coding common_peak1_296_3235_-0.194406912462529_11.5627924361987_6.23823718115793 chr1 105989515 105992128 + 6.23823718115793 NA exon (NM_001122676, exon 1 of 14) exon (NM_001122676, exon 1 of 14) 415 NM_001122675 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding common_peak2_172_1753_-0.267222500952183_10.6428217819686_6.23642789870317 chr18 44827748 44829595 + 6.23642789870317 NA promoter-TSS (NM_001163013) promoter-TSS (NM_001163013) 6 NM_001163013 240255 Mm.244482 NM_001163013 ENSMUSG00000034653 Ythdc2 3010002F02Rik|BC037178 YTH domain containing 2 protein-coding common_peak1_33_316_-0.67819045797888_7.96924380114997_6.23623038257723 chr1 75478168 75478758 + 6.23623038257723 NA intron (NM_001001565, intron 1 of 4) intron (NM_001001565, intron 1 of 4) 1008 NM_001001565 74241 Mm.260577 NM_001001565 ENSMUSG00000032997 Chpf 1700028N03Rik|AI414328|D1Bwg1363e chondroitin polymerizing factor protein-coding common_peak1_30_92_0.927523393626275_7.00292050792117_6.23448377045807-3 chr6 112853714 112854452 + 6.23448377045807 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 93183 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak1_30_92_0.927523393626275_7.00292050792117_6.23448377045807-2 chr15 86083722 86084316 + 6.23448377045807 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 25292 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_30_92_0.927523393626275_7.00292050792117_6.23448377045807 chr1 128549694 128550070 + 6.23448377045807 NA Intergenic Intergenic 42417 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_27_77_1.00116253115568_6.78598348444009_6.2343125678864-2 chr6 119395670 119396219 + 6.2343125678864 NA intron (NM_197985, intron 1 of 7) intron (NM_197985, intron 1 of 7) 21539 NM_197985 68465 Mm.291826 NM_197985 ENSMUSG00000030168 Adipor2 1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2 adiponectin receptor 2 protein-coding common_peak1_27_77_1.00116253115568_6.78598348444009_6.2343125678864 chr16 35055703 35056405 + 6.2343125678864 NA intron (NM_023587, intron 3 of 6) MTE2a|LTR|ERVL-MaLR 33633 NM_023587 70757 Mm.27286 NM_023587 ENSMUSG00000035376 Hacd2 6330408J20Rik|AI255777|AI481689|Hcad2|Ptplb 3-hydroxyacyl-CoA dehydratase 2 protein-coding common_peak2_97_939_-0.373028398467959_9.69000274733102_6.23424453484465 chr13 52827605 52829974 + 6.23424453484465 NA Intergenic Intergenic -71584 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak2_119_719_0.370027958640742_9.67686707565004_6.23224006721041 chr11 75177753 75179635 + 6.23224006721041 NA exon (NM_027136, exon 1 of 2) exon (NM_027136, exon 1 of 2) 114 NM_027136 246257 Mm.41496 NM_027136 ENSMUSG00000038268 Ovca2 9030414M07Rik candidate tumor suppressor in ovarian cancer 2 protein-coding common_peak1_22_219_-0.84289890943115_7.35991025880909_6.23195009857931-2 chr4 140770472 140771050 + 6.23195009857931 NA intron (NM_011061, intron 1 of 15) intron (NM_011061, intron 1 of 15) 3442 NM_011061 18602 Mm.250358 NM_011061 ENSMUSG00000025330 Padi4 Pad4|Pdi4 peptidyl arginine deiminase, type IV protein-coding common_peak1_22_219_-0.84289890943115_7.35991025880909_6.23195009857931 chr1 138156400 138156844 + 6.23195009857931 NA intron (NM_001268286, intron 2 of 28) B1_Mus2|SINE|Alu 18504 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding unique_peak2_22_219_-0.84289890943115_7.35991025880909_6.23195009857931 chr17 35185669 35187169 + 6.23195009857931 NA intron (NM_010734, intron 3 of 3) C-rich|Low_complexity|Low_complexity 2021 NM_010734 16988 Mm.19379 NM_010734 ENSMUSG00000073412 Lst1 B144 leukocyte specific transcript 1 protein-coding common_peak2_48_454_-0.552846498175374_8.55329948599837_6.23010301686847 chr14 69804446 69806142 + 6.23010301686847 NA 5' UTR (NM_153514, exon 1 of 10) 5' UTR (NM_153514, exon 1 of 10) 251 NM_153514 246710 Mm.102367 NM_153514 ENSMUSG00000022075 Rhobtb2 Dbc2|E130206H14Rik|mKIAA0717 Rho-related BTB domain containing 2 protein-coding common_peak2_136_864_0.339781234010772_9.92644693952947_6.22966538734782 chr1 37490736 37492975 + 6.22966538734782 NA intron (NM_001290801, intron 3 of 14) intron (NM_001290801, intron 3 of 14) -3250 NR_024017 77633 Mm.483177 NR_024017 ENSMUSG00000103948 4930594C11Rik - G1 to S phase transition pseudogene pseudo unique_peak2_11_124_-1.17862112775635_6.37647372078391_6.22894355641636 chr1 23301175 23301878 + 6.22894355641636 NA Intergenic IAPEz-int|LTR|ERVK 9825 NR_029717 723964 NR_029717 ENSMUSG00000065567 Mir30c-2 Mirn30c-2|mir-30c-2 microRNA 30c-2 ncRNA common_peak1_29_87_0.949224813960406_6.9340440256175_6.22741779729083-2 chr15 81080739 81081380 + 6.22741779729083 NA intron (NM_001082536, intron 2 of 13) intron (NM_001082536, intron 2 of 13) 23988 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding unique_peak2_29_87_0.949224813960406_6.9340440256175_6.22741779729083 chr14 103718922 103719539 + 6.22741779729083 NA Intergenic Intergenic -19798 NR_045148 70898 Mm.27548 NR_045148 ENSMUSG00000089707 Slain1os 4921525B02Rik SLAIN motif family, member 1, opposite strand ncRNA common_peak1_29_87_0.949224813960406_6.9340440256175_6.22741779729083 chr13 100317042 100317735 + 6.22741779729083 NA promoter-TSS (NM_010871) promoter-TSS (NM_010871) 300 NM_021545 53880 Mm.218759 NM_021545 Naip7 Birc1g|Naip-rs4B|Naip6 NLR family, apoptosis inhibitory protein 7 protein-coding common_peak2_29_87_0.949224813960406_6.9340440256175_6.22741779729083 chr15 81080784 81081402 + 6.22741779729083 NA intron (NM_001082536, intron 2 of 13) intron (NM_001082536, intron 2 of 13) 23954 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding unique_peak2_28_82_0.973623883165644_6.86185137292975_6.22700367733876 chr11 6679940 6680732 + 6.22700367733876 NA Intergenic Intergenic -20100 NR_028586 100041311 Mm.388018 NR_028586 ENSMUSG00000086373 Gm11978 OTTMUSG00000005125|OTTMUSG00000005127 predicted gene 11978 pseudo common_peak1_28_82_0.973623883165644_6.86185137292975_6.22700367733876 chr3 96559538 96560156 + 6.22700367733876 NA intron (NM_023719, intron 5 of 7) intron (NM_023719, intron 5 of 7) 1890 NM_023719 56338 Mm.410189 NM_023719 ENSMUSG00000038393 Txnip 1200008J08Rik|AA682105|Hyplip1|THIF|Tbp-2|VDUP1 thioredoxin interacting protein protein-coding common_peak1_232_1775_0.241695694523743_10.915263713612_6.22700249002089 chr11 11511418 11514049 + 6.22700249002089 NA intron (NM_028669, intron 5 of 5) intron (NM_028669, intron 5 of 5) 23467 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak2_52_218_0.640954705841938_8.09526441252214_6.22635580556457 chr18 56736365 56737537 + 6.22635580556457 NA intron (NM_010721, intron 5 of 10) intron (NM_010721, intron 5 of 10) 29138 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak1_90_867_-0.389206189724431_9.56694813758226_6.22506105486764 chr1 151689180 151690335 + 6.22506105486764 NA intron (NM_022018, intron 6 of 13) intron (NM_022018, intron 6 of 13) -65617 NM_001311165 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding common_peak1_63_597_-0.474523788700225_8.98673977984799_6.22410155162327 chr5 135712902 135714128 + 6.22410155162327 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 22374 NR_106001 102466791 NR_106001 ENSMUSG00000099197 Mir7034 Gm27372|mmu-mir-7034 microRNA 7034 ncRNA common_peak1_19_192_-0.901322809637304_7.14179563244943_6.22345405869458 chr11 33707050 33707577 + 6.22345405869458 NA intron (NM_001190885, intron 1 of 8) intron (NM_001190885, intron 1 of 8) -128356 NM_146017 216643 Mm.99989 NM_146017 ENSMUSG00000020159 Gabrp - gamma-aminobutyric acid (GABA) A receptor, pi protein-coding common_peak1_19_192_-0.901322809637304_7.14179563244943_6.22345405869458-3 chr7 81858587 81858894 + 6.22345405869458 NA promoter-TSS (NM_145375) promoter-TSS (NM_145375) -261 NR_111910 107769 Mm.221412 NM_145375 ENSMUSG00000038623 Tm6sf1 AI428514|BC023123|C630016D09Rik transmembrane 6 superfamily member 1 protein-coding common_peak1_19_192_-0.901322809637304_7.14179563244943_6.22345405869458-2 chr12 92891571 92892168 + 6.22345405869458 NA Intergenic RLTR3_Mm|LTR|ERVK 552954 NR_126436 75295 Mm.243878 NR_126436 4930559C10Rik - RIKEN cDNA 4930559C10 gene ncRNA unique_peak2_19_192_-0.901322809637304_7.14179563244943_6.22345405869458 chr9 44009368 44010947 + 6.22345405869458 NA Intergenic ORR1F|LTR|ERVL-MaLR -33227 NM_009382 21838 Mm.3951 NM_009382 ENSMUSG00000032011 Thy1 CD90|T25|Thy-1|Thy-1.2|Thy1.1|Thy1.2 thymus cell antigen 1, theta protein-coding common_peak2_191_1369_0.273652223803275_10.5567862897495_6.22272646977669 chr6 88517637 88519784 + 6.22272646977669 NA promoter-TSS (NM_016906) promoter-TSS (NM_016906) 90 NM_016906 53421 Mm.28375 NM_016906 ENSMUSG00000030082 Sec61a1 AA408394|AA410007|Sec61a Sec61 alpha 1 subunit (S. cerevisiae) protein-coding common_peak2_32_307_-0.689466593034022_7.92205324417789_6.22260955779965 chrX 50835585 50836988 + 6.22260955779965 NA Intergenic Intergenic -5085 NM_133729 70415 Mm.46254 NM_133729 ENSMUSG00000031112 Stk26 2610018G03Rik|Mst4 serine/threonine kinase 26 protein-coding common_peak2_32_307_-0.689466593034022_7.92205324417789_6.22260955779965-2 chrX 163909014 163909942 + 6.22260955779965 NA intron (NM_001290378, intron 1 of 4) CpG 461 NM_001290379 108012 Mm.426783 NM_026887 ENSMUSG00000031367 Ap1s2 1500012A13Rik|AI853648|EST1 adaptor-related protein complex 1, sigma 2 subunit protein-coding common_peak1_95_525_0.428081101172506_9.25295953987855_6.22072193929952 chr2 25500810 25501833 + 6.22072193929952 NA promoter-TSS (NM_027062) promoter-TSS (NM_027062) 398 NM_001271777 69379 Mm.24596 NM_027062 ENSMUSG00000015083 C8g - complement component 8, gamma polypeptide protein-coding common_peak1_25_68_1.04689678786276_6.63197285070955_6.21842043447873-2 chr15 102116023 102116510 + 6.21842043447873 NA TTS (NM_001033277) TTS (NM_001033277) 13278 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak1_25_68_1.04689678786276_6.63197285070955_6.21842043447873 chr11 44468934 44469463 + 6.21842043447873 NA intron (NM_024475, intron 1 of 10) intron (NM_024475, intron 1 of 10) 1350 NM_024475 79560 Mm.338784 NM_024475 ENSMUSG00000041231 Ublcp1 4930527B16Rik|8430435I17Rik|BC002236 ubiquitin-like domain containing CTD phosphatase 1 protein-coding common_peak2_471_4484_0.154471068794267_12.2081278042038_6.21753042374131 chr13 55210030 55213487 + 6.21753042374131 NA intron (NM_008739, intron 1 of 22) CpG 1976 NM_008739 18193 Mm.12964 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak2_275_2974_-0.202854010463163_11.4372469478511_6.21680750680207 chr1 178317578 178320053 + 6.21680750680207 NA promoter-TSS (NM_025511) promoter-TSS (NM_025511) -338 NM_025511 66359 Mm.489720 NM_025511 ENSMUSG00000026500 Cox20 2310005N03Rik|Fam36a COX20 Cox2 chaperone protein-coding common_peak1_78_745_-0.420932729141921_9.33256545568428_6.21634978912302 chr4 62517672 62519140 + 6.21634978912302 NA intron (NM_008525, intron 1 of 11) intron (NM_008525, intron 1 of 11) 1503 NM_001276446 17025 Mm.6988 NM_008525 ENSMUSG00000028393 Alad ALADH|Lv aminolevulinate, delta-, dehydratase protein-coding common_peak2_103_1001_-0.360020926181564_9.78865633010443_6.21393041692274 chr14 52256233 52258547 + 6.21393041692274 NA Intergenic CpG -19818 NM_201637 67772 Mm.289934 NM_201637 ENSMUSG00000053754 Chd8 5830451P18Rik|AU015341|Duplin|HELSNF1|mKIAA1564 chromodomain helicase DNA binding protein 8 protein-coding common_peak1_103_1001_-0.360020926181564_9.78865633010443_6.21393041692274 chr11 19919551 19920926 + 6.21393041692274 NA Intergenic CpG -4204 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_129_804_0.350681858517273_9.82818590226062_6.21330240816675 chr16 4726025 4727184 + 6.21330240816675 NA intron (NM_001136066, intron 1 of 5) CpG 243 NM_001136066 15369 Mm.272866 NM_010443 ENSMUSG00000004070 Hmox2 HO-2|HO2 heme oxygenase 2 protein-coding common_peak2_129_804_0.350681858517273_9.82818590226062_6.21330240816675 chr18 60560083 60561723 + 6.21330240816675 NA intron (NM_025776, intron 1 of 10) CpG 117 NM_025776 66810 Mm.275106 NM_025776 ENSMUSG00000024604 Rbm22 8430430L24Rik RNA binding motif protein 22 protein-coding common_peak2_192_1982_-0.25066366978259_10.8281371273376_6.21313626503916 chr4 46388442 46391135 + 6.21313626503916 NA promoter-TSS (NM_029086) promoter-TSS (NM_029086) -365 NM_029086 74753 Mm.45973 NM_029086 ENSMUSG00000028331 Trmo 5830415F09Rik|AV014846|Nap1 tRNA methyltransferase O protein-coding common_peak2_338_2914_0.190373846237826_11.6044670912068_6.21229102569298 chr11 70236847 70240735 + 6.21229102569298 NA promoter-TSS (NM_026757) promoter-TSS (NM_026757) -877 NM_145758 104457 Mm.30016 NM_026757 ENSMUSG00000020831 0610010K14Rik 1110020A23Rik|AL033328|AU045833|Bap18 RIKEN cDNA 0610010K14 gene protein-coding unique_peak2_24_236_-0.802728056761875_7.48737922051732_6.21073898589392-3 chr9 21609973 21611104 + 6.21073898589392 NA Intergenic Intergenic -2209 NR_003372 666043 Mm.247282 NR_003372 Gm7904 EG666043 predicted gene 7904 pseudo unique_peak2_24_236_-0.802728056761875_7.48737922051732_6.21073898589392-2 chr11 117239779 117241396 + 6.21073898589392 NA intron (NM_001113486, intron 2 of 11) ID_B1|SINE|B4 -25659 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak2_24_236_-0.802728056761875_7.48737922051732_6.21073898589392 chr10 127631130 127632579 + 6.21073898589392 NA Intergenic L2c|LINE|L2 -10706 NM_008512 16971 Mm.271854 NM_008512 ENSMUSG00000040249 Lrp1 A2mr|AI316852|CD91|Lrp|b2b1554Clo low density lipoprotein receptor-related protein 1 protein-coding common_peak1_24_236_-0.802728056761875_7.48737922051732_6.21073898589392 chr6 129657308 129657955 + 6.21073898589392 NA intron (NM_010653, intron 4 of 5) intron (NM_010653, intron 4 of 5) 2925 NM_010653 16642 Mm.347927 NM_010653 ENSMUSG00000052736 Klrc2 NKG2C killer cell lectin-like receptor subfamily C, member 2 protein-coding common_peak1_26_253_-0.766477119932571_7.60544612680588_6.21046076353822 chr15 83349821 83350225 + 6.21046076353822 NA intron (NM_025445, intron 1 of 15) CpG 224 NM_025445 66251 Mm.258910 NM_025445 ENSMUSG00000054277 Arfgap3 0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1 ADP-ribosylation factor GTPase activating protein 3 protein-coding common_peak1_37_352_-0.636547858687934_8.14525044392721_6.20739621406468-2 chr5 72759017 72759747 + 6.20739621406468 NA intron (NM_013689, intron 15 of 17) intron (NM_013689, intron 15 of 17) -6605 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_37_352_-0.636547858687934_8.14525044392721_6.20739621406468 chr10 79986511 79987137 + 6.20739621406468 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -1776 NM_007725 12798 Mm.157770 NM_007725 ENSMUSG00000004665 Cnn2 AA408047|AI324678|Calpo2 calponin 2 protein-coding common_peak1_161_1088_0.304166155462328_10.2408713164481_6.20696900666556 chr6 108530887 108533200 + 6.20696900666556 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 42300 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_71_346_0.519118131667119_8.69835091841182_6.20612631450917 chrX 109094671 109096092 + 6.20612631450917 NA promoter-TSS (NM_019989) promoter-TSS (NM_019989) -26 NM_019989 56726 Mm.260760 NM_019989 ENSMUSG00000031246 Sh3bgrl 1190008F14Rik SH3-binding domain glutamic acid-rich protein like protein-coding common_peak1_71_346_0.519118131667119_8.69835091841182_6.20612631450917 chr13 77134733 77135813 + 6.20612631450917 NA promoter-TSS (NM_001145676) promoter-TSS (NM_001145676) 195 NM_134071 105377 Mm.209730 NM_134071 ENSMUSG00000021597 Slf1 2700017A04Rik|AW545819|Ankrd32|Brctd1|Brctx|C730024G01Rik SMC5-SMC6 complex localization factor 1 protein-coding unique_peak2_30_289_-0.713226885280628_7.82329564737462_6.20391550022131 chr19 17167446 17168838 + 6.20391550022131 NA intron (NM_181348, intron 9 of 19) intron (NM_181348, intron 9 of 19) 171363 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak2_30_289_-0.713226885280628_7.82329564737462_6.20391550022131 chr5 62573609 62575046 + 6.20391550022131 NA Intergenic Intergenic 191850 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak2_159_1606_-0.27918305248525_10.5105626874325_6.20382068477764 chr6 108629578 108632461 + 6.20382068477764 NA intron (NR_104577, intron 1 of 6) ORR1D2|LTR|ERVL-MaLR -7852 NR_040757 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_341_2948_0.189235439828076_11.6206278269758_6.20355245402304 chr9 113740255 113742738 + 6.20355245402304 NA promoter-TSS (NM_001114347) promoter-TSS (NM_001114347) 23 NM_001114347 76499 Mm.222272 NM_029633 ENSMUSG00000033392 Clasp2 1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627 CLIP associating protein 2 protein-coding common_peak1_27_262_-0.752354239274377_7.66274186965511_6.20225807031266 chr16 35022292 35022876 + 6.20225807031266 NA exon (NM_023587, exon 1 of 7) exon (NM_023587, exon 1 of 7) 163 NM_023587 70757 Mm.27286 NM_023587 ENSMUSG00000035376 Hacd2 6330408J20Rik|AI255777|AI481689|Hcad2|Ptplb 3-hydroxyacyl-CoA dehydratase 2 protein-coding unique_peak2_16_167_-0.988781161804589_6.89792684187647_6.20191199339938 chrX 50549821 50550760 + 6.20191199339938 NA intron (NR_131207, intron 2 of 2) intron (NR_131207, intron 2 of 2) 12901 NR_131207 102639259 Mm.350898 NR_131207 Gm35612 - predicted gene, 35612 ncRNA common_peak2_40_146_0.761770920229061_7.5805578049509_6.20117988185088 chr5 73197184 73198346 + 6.20117988185088 NA intron (NM_028194, intron 2 of 62) MT2B|LTR|ERVL 58853 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak2_56_244_0.607860780547602_8.24056832927637_6.20110300312073 chr5 65475483 65477079 + 6.20110300312073 NA intron (NM_133697, intron 1 of 4) B3|SINE|B2 16554 NM_133697 68552 Mm.10709 NM_133697 ENSMUSG00000037822 Smim14 1110003E01Rik|1700127H04Rik|5430439C17Rik|MAd4 small integral membrane protein 14 protein-coding common_peak2_373_3314_0.178736830288431_11.7841615701442_6.20042347392448 chr8 70338194 70344663 + 6.20042347392448 NA intron (NM_001122829, intron 5 of 23) intron (NM_001122829, intron 5 of 23) 11663 NM_008107 14559 Mm.258280 NM_008107 ENSMUSG00000087408 Gdf1 AI385651|Gdf-1 growth differentiation factor 1 protein-coding common_peak2_490_4719_0.150630795234592_12.2798865418665_6.20013909480176 chr10 42274063 42278819 + 6.20013909480176 NA intron (NM_019740, intron 1 of 3) CpG-1005 301 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding common_peak1_66_626_-0.461777932652316_9.06143266647588_6.19959821361437 chr4 62481539 62482237 + 6.19959821361437 NA intron (NM_138653, intron 1 of 6) L1M2|LINE|L1 1821 NM_138653 192120 Mm.29808 NM_138653 ENSMUSG00000028392 Bspry - B-box and SPRY domain containing protein-coding common_peak1_28_271_-0.738799526737771_7.71806307788145_6.19876285021132 chr3 101288218 101288672 + 6.19876285021132 NA promoter-TSS (NM_013486) promoter-TSS (NM_013486) -506 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding unique_peak2_6_83_-1.55897729513355_5.61282877521199_6.19699457725345 chr9 63744117 63745027 + 6.19699457725345 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 13422 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_35_118_0.83647990975108_7.31305771818348_6.19660778409307 chr13 62785354 62786175 + 6.19660778409307 NA promoter-TSS (NM_001256065) promoter-TSS (NM_001256065) 44 NM_001256065 380850 Mm.439823 NM_001256065 ENSMUSG00000091183 Gm5141 - predicted gene 5141 protein-coding common_peak1_131_1298_-0.31264114541429_10.1868651427407_6.195401051308 chr9 73112937 73114155 + 6.195401051308 NA promoter-TSS (NM_198609) promoter-TSS (NM_198609) 77 NM_198609 225215 Mm.379366 NM_198609 ENSMUSG00000032215 Rsl24d1 2410159K22Rik ribosomal L24 domain containing 1 protein-coding common_peak1_14_150_-1.05636061791373_6.71022443036821_6.19499221613736-2 chr8 57416640 57417090 + 6.19499221613736 NA Intergenic Intergenic -39058 NM_009136 20284 Mm.12886 NM_009136 ENSMUSG00000031610 Scrg1 AW124307 scrapie responsive gene 1 protein-coding common_peak1_14_150_-1.05636061791373_6.71022443036821_6.19499221613736 chr1 170227849 170228258 + 6.19499221613736 NA Intergenic Intergenic -4818 NM_001033499 545378 Mm.379942 NM_001033499 ENSMUSG00000073494 Sh2d1b2 EAT-2B|Eat2b|Ert|Sh2d1c SH2 domain containing 1B2 protein-coding common_peak2_144_935_0.326404181807485_10.0335668104871_6.19498612044175 chr7 90310354 90314252 + 6.19498612044175 NA intron (NM_001289583, intron 1 of 19) intron (NM_001289583, intron 1 of 19) 9948 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_213_1585_0.25440567483815_10.7583798931231_6.1947847698078 chr11 69994678 69998098 + 6.1947847698078 NA promoter-TSS (NM_001291126) promoter-TSS (NM_001291126) -553 NM_001291126 78246 Mm.20805 NM_030064 ENSMUSG00000018572 Phf23 JUNE-1 PHD finger protein 23 protein-coding common_peak2_71_675_-0.442969452036804_9.17939471026378_6.19419588387038 chr6 120469075 120471496 + 6.19419588387038 NA intron (NM_008359, intron 1 of 12) intron (NM_008359, intron 1 of 12) 7088 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak1_25_245_-0.787093260698308_7.54896787499009_6.19270280955055 chr3 104512073 104512609 + 6.19270280955055 NA promoter-TSS (NM_001025067) promoter-TSS (NM_001025067) -423 NM_001025067 269473 Mm.34855 NM_001025067 ENSMUSG00000032913 Lrig2 4632419I10Rik|BB096938|LIG-2 leucine-rich repeats and immunoglobulin-like domains 2 protein-coding common_peak1_232_1776_0.240883594845171_10.9156697634513_6.18902541656303 chr12 112673084 112675423 + 6.18902541656303 NA promoter-TSS (NM_001165894) promoter-TSS (NM_001165894) 23 NM_001165894 11651 Mm.6645 NM_009652 ENSMUSG00000001729 Akt1 Akt|LTR-akt|PKB|PKB/Akt|PKBalpha|Rac thymoma viral proto-oncogene 1 protein-coding common_peak1_86_456_0.456747475607783_9.06442409286196_6.18861313037546 chr16 11474419 11475760 + 6.18861313037546 NA intron (NM_001290148, intron 6 of 13) B4A|SINE|B4 69441 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak1_40_379_-0.608412343265521_8.26564943669819_6.18710901042263 chr7 28702898 28703637 + 6.18710901042263 NA Intergenic Intergenic 10123 NM_001163702 233040 Mm.116116 NM_207238 ENSMUSG00000037463 Fbxo27 E130008B10Rik|FBG5|Gm161 F-box protein 27 protein-coding unique_peak2_9_107_-1.29036558571905_6.10970470930394_6.18702227736623-3 chr17 35766155 35767036 + 6.18702227736623 NA Intergenic Intergenic -5855 NR_045459 74601 Mm.410840 NR_045459 ENSMUSG00000092171 4833427F10Rik - RIKEN cDNA 4833427F10 gene ncRNA unique_peak2_9_107_-1.29036558571905_6.10970470930394_6.18702227736623-2 chr15 93229278 93230045 + 6.18702227736623 NA Intergenic Intergenic 45423 NM_001033275 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding unique_peak2_9_107_-1.29036558571905_6.10970470930394_6.18702227736623 chr11 120939003 120939927 + 6.18702227736623 NA Intergenic Intergenic -6593 NM_027745 71276 Mm.275751 NM_027745 ENSMUSG00000048445 Ccdc57 4933434G05Rik coiled-coil domain containing 57 protein-coding common_peak1_112_661_0.384832091365183_9.56310345248981_6.18629998872915 chr2 153240590 153242113 + 6.18629998872915 NA promoter-TSS (NM_018807) promoter-TSS (NM_018807) 7 NM_018807 54711 Mm.103199 NM_018807 ENSMUSG00000051413 Plagl2 AU018672|AW552839|mKIAA0198 pleiomorphic adenoma gene-like 2 protein-coding common_peak2_64_607_-0.471012993110689_9.01242101688824_6.18572330946755-2 chr17 78350713 78352873 + 6.18572330946755 NA intron (NM_015800, intron 12 of 16) intron (NM_015800, intron 12 of 16) 66359 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak2_64_607_-0.471012993110689_9.01242101688824_6.18572330946755 chr15 88890359 88892130 + 6.18572330946755 NA Intergenic Intergenic 29050 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding common_peak2_268_2150_0.219567312145946_11.180575465496_6.1855776369078 chr6 54969380 54974778 + 6.1855776369078 NA promoter-TSS (NM_001171007) promoter-TSS (NM_001171007) -418 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak1_117_1148_-0.334024366417932_9.99915089943715_6.18492715364808 chr4 148082928 148084350 + 6.18492715364808 NA intron (NM_001301281, intron 2 of 4) intron (NM_001301281, intron 2 of 4) 4425 NM_009642 11610 Mm.46247 NM_009642 ENSMUSG00000029007 Agtrap 3300002E14Rik|AT1R|Atrap|D4Wsu124e angiotensin II, type I receptor-associated protein protein-coding common_peak1_594_6046_0.13317409346641_12.6285909103848_6.18477099204872 chr5 64802401 64808430 + 6.18477099204872 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 1892 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_149_979_0.320124080473454_10.0966999792393_6.18416585051559 chr9 109037754 109040167 + 6.18416585051559 NA intron (NM_025858, intron 1 of 5) intron (NM_025858, intron 1 of 5) 393 NM_001284332 66940 Mm.196533 NM_025858 ENSMUSG00000025647 Shisa5 2310008D10Rik|6430628I05Rik|Scotin|mShisa5 shisa family member 5 protein-coding common_peak2_193_1389_0.271081506938895_10.5764099210803_6.18414853210375 chr6 146500395 146502557 + 6.18414853210375 NA intron (NM_019923, intron 1 of 56) intron (NM_019923, intron 1 of 56) 747 NM_010586 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak1_334_3713_-0.180108812907376_11.7687036934817_6.18234056601463 chr5 112270227 112274010 + 6.18234056601463 NA Intergenic ID_B1|SINE|B4 -4589 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak1_49_463_-0.545353491804832_8.58530424922516_6.18082214742367 chr12 98283371 98283994 + 6.18082214742367 NA Intergenic Intergenic 15047 NM_008152 14744 Mm.378924 NM_008152 ENSMUSG00000021886 Gpr65 Dig1|Gpcr25|TDAG8 G-protein coupled receptor 65 protein-coding common_peak1_74_705_-0.433374664981514_9.24683704078042_6.17998099083092 chr5 142931236 142932592 + 6.17998099083092 NA Intergenic B1_Mur2|SINE|Alu -25160 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_60_568_-0.487765391259609_8.90840214667678_6.17924608880946 chr18 35729748 35730908 + 6.17924608880946 NA 3' UTR (NM_001033168, exon 2 of 2) 3' UTR (NM_001033168, exon 2 of 2) 3339 NM_001033168 73449 Mm.379225 NM_001033168 ENSMUSG00000073598 1700066B19Rik - RIKEN cDNA 1700066B19 gene protein-coding common_peak1_77_390_0.488530963486864_8.85529027905078_6.17561862969915 chr10 39412258 39413596 + 6.17561862969915 NA intron (NM_001122892, intron 2 of 12) MIR3|SINE|MIR 43128 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak1_20_46_1.22288579212086_6.16603174773807_6.17432760070619 chr18 67897427 67897900 + 6.17432760070619 NA Intergenic Intergenic -35594 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_20_46_1.22288579212086_6.16603174773807_6.17432760070619 chr9 21318656 21319007 + 6.17432760070619 NA Intergenic Intergenic -1888 NM_001199186 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding common_peak1_83_795_-0.405925354372439_9.43366194335743_6.17428496927159 chr12 111038399 111039121 + 6.17428496927159 NA Intergenic CpG -1038 NM_198023 217864 Mm.23808 NM_198023 ENSMUSG00000037896 Rcor1 5730409O11|6720480E22Rik|AU042633|D12Wsu95e|Rocr1|mKIAA0071 REST corepressor 1 protein-coding common_peak1_229_2415_-0.225226037166895_11.1257917207416_6.17427543050985 chr4 32250963 32252908 + 6.17427543050985 NA Intergenic Intergenic -165500 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_127_787_0.354038377227861_9.79907100807031_6.17417838863983 chr1 161968518 161969913 + 6.17417838863983 NA promoter-TSS (NM_001039045) promoter-TSS (NM_001039045) 27 NM_026078 67292 Mm.45106 NM_026078 ENSMUSG00000026698 Pigc 3110030E07Rik|AW212108 phosphatidylinositol glycan anchor biosynthesis, class C protein-coding common_peak1_98_549_0.418166655402143_9.31237113611309_6.17246528523953 chr1 171345090 171346674 + 6.17246528523953 NA promoter-TSS (NM_012049) promoter-TSS (NM_012049) 183 NM_011070 18637 Mm.10756 NM_011070 ENSMUSG00000006412 Pfdn2 ESTM27|W48336 prefoldin 2 protein-coding common_peak1_43_407_-0.586015288091188_8.3794176979259_6.16848676701284-2 chrX 167089218 167089960 + 6.16848676701284 NA Intergenic Intergenic -19219 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak1_43_407_-0.586015288091188_8.3794176979259_6.16848676701284 chrX 134059111 134059803 + 6.16848676701284 NA intron (NM_133196, intron 1 of 13) CpG 281 NM_133196 108062 Mm.67938 NM_133196 ENSMUSG00000031256 Cstf2 C630034J23Rik|Cstf64|mir-3112 cleavage stimulation factor, 3' pre-RNA subunit 2 protein-coding unique_peak2_20_201_-0.880736838953297_7.21784306327515_6.16848056873869 chr6 127616716 127618130 + 6.16848056873869 NA intron (NM_001033464, intron 5 of 6) intron (NM_001033464, intron 5 of 6) 39448 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak1_20_201_-0.880736838953297_7.21784306327515_6.16848056873869 chr18 80578811 80579289 + 6.16848056873869 NA Intergenic Intergenic -34504 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_154_1550_-0.284195179423463_10.4568853813244_6.16782990538796 chr3 90432580 90434447 + 6.16782990538796 NA 5' UTR (NM_178876, exon 1 of 31) 5' UTR (NM_178876, exon 1 of 31) 123 NM_145540 229543 Mm.268564 NM_145540 ENSMUSG00000027933 Ints3 C77668 integrator complex subunit 3 protein-coding common_peak2_46_435_-0.565053237350909_8.48565770610147_6.16756043126267 chr7 16119314 16120332 + 6.16756043126267 NA promoter-TSS (NM_133727) promoter-TSS (NM_133727) -53 NM_133727 70394 Mm.41101 NM_133727 ENSMUSG00000006021 Kptn 2310042D10Rik|2E4|C030013F01Rik kaptin protein-coding common_peak2_182_1284_0.281101323119016_10.4681033056407_6.16672958313343 chr4 116220497 116222334 + 6.16672958313343 NA promoter-TSS (NM_181585) promoter-TSS (NM_181585) -499 NM_181585 18710 Mm.253819 NM_181585 ENSMUSG00000028698 Pik3r3 AA414954|p55pik phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55) protein-coding common_peak2_157_1052_0.308421681273956_10.1945005616627_6.16526316141067 chr2 120608551 120610314 + 6.16526316141067 NA promoter-TSS (NM_025475) promoter-TSS (NM_025475) 50 NM_025475 66296 Mm.221900 NM_025475 ENSMUSG00000027285 Haus2 1700101G24Rik|2410007P03Rik|AU020217|Cep27 HAUS augmin-like complex, subunit 2 protein-coding common_peak2_87_464_0.451935459071269_9.08705463553103_6.1651400818518 chr17 28924564 28926768 + 6.1651400818518 NA Intergenic Intergenic -10342 NM_172450 207819 Mm.248931 NM_172450 ENSMUSG00000048905 4930539E08Rik 9130014G02 RIKEN cDNA 4930539E08 gene protein-coding common_peak1_157_1583_-0.280645217779938_10.4890340111896_6.16502982130293 chr7 113512885 113514812 + 6.16502982130293 NA promoter-TSS (NM_027379) promoter-TSS (NM_027379) 14 NM_027379 67420 Mm.206919 NM_026143 ENSMUSG00000030759 Far1 2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2 fatty acyl CoA reductase 1 protein-coding common_peak1_235_1807_0.238572064999351_10.9394649949149_6.16497527022324 chr14 67008013 67009516 + 6.16497527022324 NA exon (NM_009761, exon 1 of 6) exon (NM_009761, exon 1 of 6) 113 NM_009761 12177 Mm.29820 NM_009761 ENSMUSG00000022051 Bnip3l C86132|D14Ertd719e|Nip3L|Nix BCL2/adenovirus E1B interacting protein 3-like protein-coding common_peak1_139_891_0.333770436975941_9.96778511840828_6.16461266996748 chr17 79019720 79021263 + 6.16461266996748 NA intron (NM_029239, intron 1 of 18) CpG 325 NM_001171004 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding common_peak2_270_2171_0.218659145543045_11.1941379605759_6.16454022563986 chr12 76960512 76963428 + 6.16454022563986 NA intron (NM_008558, intron 1 of 4) CpG 278 NM_008558 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak1_34_324_-0.662850193392282_8.01287081121967_6.16397201866884 chr17 45974044 45974830 + 6.16397201866884 NA Intergenic Intergenic 50726 NM_001110267 22339 Mm.282184 NM_009505 ENSMUSG00000023951 Vegfa Vegf|Vpf vascular endothelial growth factor A protein-coding common_peak2_53_225_0.628640915610763_8.13449942022057_6.16396185416267 chr17 23192692 23193911 + 6.16396185416267 NA promoter-TSS (NM_009555) promoter-TSS (NM_009555) -73 NM_009555 22700 Mm.437934 NM_009555 ENSMUSG00000002617 Zfp40 CTfin12|NTfin12|Zfp-40 zinc finger protein 40 protein-coding common_peak2_53_225_0.628640915610763_8.13449942022057_6.16396185416267-2 chr2 22815596 22817116 + 6.16396185416267 NA intron (NM_019456, intron 1 of 13) ORR1E|LTR|ERVL-MaLR 42029 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak1_51_213_0.640566569426142_8.06175027111422_6.16154556698886 chr1 128606201 128607226 + 6.16154556698886 NA Intergenic Intergenic -14414 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_257_2035_0.224952151517893_11.1039979218346_6.16112480526889 chr5 34572780 34575091 + 6.16112480526889 NA promoter-TSS (NR_106111) promoter-TSS (NR_106111) -216 NR_106111 102466999 NR_106111 ENSMUSG00000099082 Mir7036b Gm27625|mmu-mir-7036b microRNA 7036b ncRNA common_peak1_17_175_-0.95474625676463_6.98205849025498_6.16091871974029 chr14 69979179 69979576 + 6.16091871974029 NA intron (NM_028560, intron 4 of 6) MER74B|LTR|ERVL -98068 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding common_peak1_17_175_-0.95474625676463_6.98205849025498_6.16091871974029-2 chr18 73764756 73765148 + 6.16091871974029 NA Intergenic Intergenic -10473 NM_053255 114615 Mm.50642 NM_053255 ENSMUSG00000036941 Elac1 2610018O07Rik|8430417G19Rik elaC ribonuclease Z 1 protein-coding common_peak2_491_4734_0.149653693235676_12.2839755569736_6.16038250523248 chr6 38350288 38356179 + 6.16038250523248 NA intron (NM_028864, intron 1 of 8) intron (NM_028864, intron 1 of 8) 1370 NM_028864 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding common_peak2_312_3433_-0.187231128007921_11.6520587599982_6.16021331273527 chr6 122810013 122812663 + 6.16021331273527 NA Intergenic CpG -8846 NM_021899 60611 Mm.87142 NM_021899 ENSMUSG00000003154 Foxj2 Fhx forkhead box J2 protein-coding unique_peak1_21_50_1.18737240072246_6.26611154233272_6.15969362835916 chr2 35898275 35898703 + 6.15969362835916 NA intron (NM_029774, intron 4 of 9) MIRb|SINE|MIR 79299 NR_040618 77665 Mm.400558 NR_040618 ENSMUSG00000086449 9030204H09Rik - RIKEN cDNA 9030204H09 gene ncRNA unique_peak2_10_116_-1.23717928807581_6.2517750755455_6.15969362835915 chr11 55097060 55097718 + 6.15969362835915 NA promoter-TSS (NM_010299) promoter-TSS (NM_010299) -596 NM_010299 14667 Mm.287807 NM_010299 ENSMUSG00000000594 Gm2a AA408702|AW215435|GM2-AP|SAP-3 GM2 ganglioside activator protein protein-coding unique_peak2_8_99_-1.36578313908841_5.96096462023052_6.15925941311368 chr10 81613626 81614586 + 6.15925941311368 NA Intergenic Intergenic 7798 NR_030677 268319 Mm.131825 NM_001033363 ENSMUSG00000074862 BC025920 - zinc finger protein pseudogene pseudo unique_peak2_8_99_-1.36578313908841_5.96096462023052_6.15925941311368-2 chr3 7612839 7613741 + 6.15925941311368 NA promoter-TSS (NM_001313890) promoter-TSS (NM_001313890) -397 NM_001313890 16196 Mm.3825 NM_008371 ENSMUSG00000040329 Il7 A630026I06Rik|Il-7|hlb368 interleukin 7 protein-coding common_peak1_17_34_1.3754023449277_5.81698418940882_6.15907770831071 chr4 107180035 107180406 + 6.15907770831071 NA intron (NM_029565, intron 1 of 7) B1_Mus1|SINE|Alu 1590 NM_029565 56374 Mm.291192 NM_029565 ENSMUSG00000028618 Tmem59 1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18 transmembrane protein 59 protein-coding unique_peak2_7_91_-1.4539210041182_5.79660145399791_6.15907770831071 chrX 159199817 159200619 + 6.15907770831071 NA Intergenic Intergenic -55564 NM_148945 110651 Mm.328476 NM_148945 ENSMUSG00000031309 Rps6ka3 MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2 ribosomal protein S6 kinase polypeptide 3 protein-coding common_peak2_297_2462_0.205336400795016_11.3688691128965_6.15791493001265 chr1 180847795 180851989 + 6.15791493001265 NA Intergenic Intergenic -1259 NM_145943 208768 Mm.272625 NM_145943 ENSMUSG00000038806 Sde2 - SDE2 telomere maintenance homolog (S. pombe) protein-coding common_peak2_78_744_-0.418997524236207_9.33159785323142_6.15789928578078 chr3 40949650 40951467 + 6.15789928578078 NA promoter-TSS (NM_001040399) promoter-TSS (NM_001040399) -73 NM_001040399 214048 Mm.46782 NM_027663 ENSMUSG00000025762 Larp1b 1700108L22Rik|4933421B21Rik|AA690246|Larp2 La ribonucleoprotein domain family, member 1B protein-coding common_peak1_63_291_0.559653326617862_8.46965122218895_6.15662670080719 chr1 171064347 171065477 + 6.15662670080719 NA promoter-TSS (NR_106103) promoter-TSS (NR_106103) -260 NR_106103 102466998 NR_106103 ENSMUSG00000099119 Mir6546 Gm27408|mmu-mir-6546 microRNA 6546 ncRNA common_peak1_199_2061_-0.243976491672656_10.8878403715318_6.15642324547867 chr19 4810361 4812469 + 6.15642324547867 NA exon (NM_019869, exon 1 of 3) exon (NM_019869, exon 1 of 3) 219 NM_001290127 102902673 Mm.426069 NM_001290127 ENSMUSG00000096370 Gm21992 Rbm14-rbm4 predicted gene 21992 protein-coding common_peak1_84_805_-0.402994180675476_9.45313893819023_6.15499451056223 chr6 48711996 48713550 + 6.15499451056223 NA Intergenic Intergenic -4529 NM_153175 231931 Mm.321047 NM_153175 ENSMUSG00000047867 Gimap6 4833419H03Rik|Ian6|mFLJ00102 GTPase, IMAP family member 6 protein-coding common_peak1_39_141_0.76799941931245_7.53374682916091_6.15360135665915 chr6 83009897 83010850 + 6.15360135665915 NA intron (NM_033079, intron 7 of 9) RMER6B|LTR|ERVK 23098 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding common_peak1_291_2397_0.207927705344117_11.3315797960863_6.15312467221425 chr5 137530418 137534530 + 6.15312467221425 NA intron (NM_010312, intron 1 of 9) intron (NM_010312, intron 1 of 9) 755 NM_010312 14693 Mm.30141 NM_010312 ENSMUSG00000029713 Gnb2 Gnb-2 guanine nucleotide binding protein (G protein), beta 2 protein-coding common_peak2_42_397_-0.590897450289699_8.3411758953988_6.15196028813981 chr10 34296870 34298365 + 6.15196028813981 NA exon (NM_030203, exon 1 of 1) exon (NM_030203, exon 1 of 1) 196 NM_030203 72480 Mm.21485 NM_030203 ENSMUSG00000039485 Tspyl4 2610102M01Rik|B230210I21Rik|D10Bwg0791e TSPY-like 4 protein-coding common_peak2_142_918_0.328269295293392_10.0080556989357_6.1507015084612 chr2 166718392 166720715 + 6.1507015084612 NA intron (NR_105783, intron 2 of 2) MLT1L|LTR|ERVL-MaLR -5721 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding common_peak1_115_687_0.375623182183183_9.61407634579369_6.14985690414885 chr10 59616048 59617009 + 6.14985690414885 NA exon (NM_001033259, exon 1 of 8) exon (NM_001033259, exon 1 of 8) 164 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak2_337_3750_-0.178633387945704_11.7837428536886_6.14829369405388 chr11 77982569 77985712 + 6.14829369405388 NA exon (NM_174852, exon 2 of 15) exon (NM_174852, exon 2 of 15) 1324 NM_174852 268448 Mm.274329 NM_174852 ENSMUSG00000037791 Phf12 2410142K10Rik|F630045O13|PF1|mKIAA1523 PHD finger protein 12 protein-coding common_peak1_116_1136_-0.333938573131103_9.9840472523267_6.14812429539813 chr8 121584734 121585518 + 6.14812429539813 NA Intergenic B1_Mus2|SINE|Alu -5342 NM_026160 67443 Mm.28357 NM_026160 ENSMUSG00000031812 Map1lc3b 1010001C15Rik|Atg8|LC3b|Map1lc3 microtubule-associated protein 1 light chain 3 beta protein-coding common_peak2_131_822_0.345795949611965_9.85764659522761_6.14784123546373 chr12 108644143 108647279 + 6.14784123546373 NA intron (NM_001163396, intron 2 of 14) intron (NM_001163396, intron 2 of 14) 9958 NM_001163396 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774 Ena-vasodilator stimulated phosphoprotein protein-coding common_peak1_33_315_-0.673632176016575_7.96696466016881_6.1467415844318 chr17 35841619 35842219 + 6.1467415844318 NA intron (NM_001010833, intron 1 of 15) intron (NM_001010833, intron 1 of 15) 421 NM_001010833 240087 Mm.218511 NM_001010833 ENSMUSG00000061607 Mdc1 6820401C03|AA413496|Nfbd1|mKIAA0170 mediator of DNA damage checkpoint 1 protein-coding common_peak2_143_927_0.326541300304163_10.0212516452797_6.14665094458958 chr14 79389910 79391684 + 6.14665094458958 NA promoter-TSS (NM_025832) promoter-TSS (NM_025832) -129 NM_025832 66897 Mm.24425 NM_025832 ENSMUSG00000022020 Naa16 1300019C06Rik|Narg1l N(alpha)-acetyltransferase 16, NatA auxiliary subunit protein-coding common_peak2_110_1073_-0.344860110620717_9.89634822267505_6.14554395795328 chr5 100415465 100417400 + 6.14554395795328 NA promoter-TSS (NM_026969) promoter-TSS (NM_026969) -198 NM_026969 69162 Mm.18634 NM_026969 ENSMUSG00000035325 Sec31a 1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1 Sec31 homolog A (S. cerevisiae) protein-coding unique_peak2_13_141_-1.08979468067311_6.60484977916813_6.14500208688163 chr10 93041582 93042334 + 6.14500208688163 NA Intergenic Intergenic -118918 NM_146239 237459 Mm.217404 NM_146239 ENSMUSG00000020015 Cdk17 6430598J10Rik|Pctk2 cyclin-dependent kinase 17 protein-coding common_peak1_13_141_-1.08979468067311_6.60484977916813_6.14500208688163 chr12 100725345 100725806 + 6.14500208688163 NA promoter-TSS (NM_153587) promoter-TSS (NM_153587) -547 NM_153587 73086 Mm.220417 NM_153587 ENSMUSG00000021180 Rps6ka5 3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK|RLSK|S6K-alpha-5 ribosomal protein S6 kinase, polypeptide 5 protein-coding common_peak2_133_1318_-0.308072837915464_10.2111924302938_6.14475975147445 chr16 36873999 36876006 + 6.14475975147445 NA promoter-TSS (NM_134111) promoter-TSS (NM_134111) -176 NM_134111 106389 Mm.432078 NM_134111 ENSMUSG00000022838 Eaf2 AW048865|FESTA-L|FESTA-S|Festa|Traits|U19 ELL associated factor 2 protein-coding common_peak2_305_2550_0.201570420864623_11.4176323940348_6.14455310960041 chr8 13647415 13652904 + 6.14455310960041 NA intron (NM_009025, intron 1 of 23) B4|SINE|B4 27428 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_100_565_0.412189950773575_9.35075321821867_6.14404365786945 chr5 92488252 92489379 + 6.14404365786945 NA intron (NM_007644, intron 1 of 11) L2|LINE|L2 16842 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding common_peak2_61_278_0.569173204091475_8.40870791387492_6.14296412034009-2 chr16 14361035 14362470 + 6.14296412034009 NA intron (NM_008576, intron 1 of 30) CpG 194 NM_008576 17250 Mm.196634 NM_008576 ENSMUSG00000023088 Abcc1 Abcc1a|Abcc1b|MRP|Mdrap|Mrp1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding common_peak2_61_278_0.569173204091475_8.40870791387492_6.14296412034009 chr11 70539356 70540694 + 6.14296412034009 NA promoter-TSS (NM_008876) promoter-TSS (NM_008876) -247 NM_008876 18806 Mm.260177 NM_008876 ENSMUSG00000020828 Pld2 PLD1C phospholipase D2 protein-coding common_peak1_252_2690_-0.212084458419055_11.2878844464309_6.14055260638592 chr4 109664943 109667547 + 6.14055260638592 NA promoter-TSS (NM_007671) promoter-TSS (NM_007671) 511 NM_001301368 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) protein-coding common_peak1_73_361_0.506550075314561_8.75312092474049_6.14037285863781 chr5 135994765 135995580 + 6.14037285863781 NA intron (NM_001256096, intron 1 of 10) CpG 372 NM_001256098 74198 Mm.275574 NM_023742 ENSMUSG00000004947 Dtx2 2610524D08Rik|AA408415|AU022494|Deltex2 deltex 2, E3 ubiquitin ligase protein-coding common_peak2_245_2606_-0.21598477513049_11.2401824799703_6.14003708475719 chr2 181580110 181582333 + 6.14003708475719 NA TTS (NM_001164597) TTS (NM_001164597) 752 NM_026765 68556 Mm.232400 NM_026765 ENSMUSG00000089917 Uckl1 1110007H10Rik|Urkl1 uridine-cytidine kinase 1-like 1 protein-coding common_peak1_38_135_0.785480608357521_7.4802031454291_6.13993866377919 chr19 32769277 32770175 + 6.13993866377919 NA intron (NM_008960, intron 1 of 8) intron (NM_008960, intron 1 of 8) 12149 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1 phosphatase and tensin homolog protein-coding common_peak1_38_135_0.785480608357521_7.4802031454291_6.13993866377919-3 chr6 114901559 114902336 + 6.13993866377919 NA intron (NM_177683, intron 1 of 4) intron (NM_177683, intron 1 of 4) 19805 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_38_135_0.785480608357521_7.4802031454291_6.13993866377919-2 chr3 133543190 133543829 + 6.13993866377919 NA intron (NM_001040400, intron 1 of 10) intron (NM_001040400, intron 1 of 10) 881 NM_001040400 214133 Mm.347816 NM_145989 ENSMUSG00000040943 Tet2 Ayu17-449|E130014J05Rik|mKIAA1546 tet methylcytosine dioxygenase 2 protein-coding common_peak2_38_135_0.785480608357521_7.4802031454291_6.13993866377919 chr16 16146217 16146873 + 6.13993866377919 NA intron (NM_146068, intron 1 of 19) intron (NM_146068, intron 1 of 19) 306 NM_146068 224008 Mm.244703 NM_146068 ENSMUSG00000041974 Spidr 2310008H04Rik|Kiaa0146 scaffolding protein involved in DNA repair protein-coding common_peak1_294_2430_0.206297813891418_11.3504830849744_6.13913883876965 chr12 69361110 69362481 + 6.13913883876965 NA Intergenic Intergenic -4619 NM_025441 66244 Mm.46705 NM_025441 ENSMUSG00000020982 Nemf 1500011I12Rik|4933405E14Rik|Sdccag1 nuclear export mediator factor protein-coding common_peak2_101_978_-0.360881961289882_9.75472406895875_6.13861858231783 chr7 126428112 126430021 + 6.13861858231783 NA 5' UTR (NM_030566, exon 1 of 13) 5' UTR (NM_030566, exon 1 of 13) 299 NM_030566 70314 Mm.35467 NM_030566 ENSMUSG00000030727 Rabep2 2610011A08Rik|AI462746|Fra rabaptin, RAB GTPase binding effector protein 2 protein-coding common_peak1_76_724_-0.42511564412923_9.28927936283768_6.1379952778663 chr1 71101811 71102951 + 6.1379952778663 NA intron (NM_007525, intron 1 of 10) intron (NM_007525, intron 1 of 10) 591 NM_007525 12021 Mm.10764 NM_007525 ENSMUSG00000026196 Bard1 ENSMUSG00000060893|ENSMUSG00000073653 BRCA1 associated RING domain 1 protein-coding common_peak1_76_724_-0.42511564412923_9.28927936283768_6.1379952778663-2 chr17 35994052 35995338 + 6.1379952778663 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) 191 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA common_peak2_45_176_0.697467565196868_7.81633933268143_6.13625304472125 chr8 125531388 125532545 + 6.13625304472125 NA Intergenic ORR1E|LTR|ERVL-MaLR -39256 NM_001081337 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding common_peak2_32_306_-0.684774897709299_7.91970739651553_6.13194228787581 chr18 69345737 69346946 + 6.13194228787581 NA intron (NM_001083967, intron 1 of 19) CpG 620 NM_001083967 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak2_150_989_0.317235670018579_10.1099025499763_6.13099686120319 chr7 12921221 12922979 + 6.13099686120319 NA promoter-TSS (NM_009095) promoter-TSS (NM_009095) -211 NM_009095 20103 Mm.5291 NM_009095 ENSMUSG00000012848 Rps5 AA617411 ribosomal protein S5 protein-coding common_peak1_47_443_-0.554028087071654_8.51740182281428_6.13090105773098 chr11 4594941 4595480 + 6.13090105773098 NA promoter-TSS (NM_028860) promoter-TSS (NM_028860) -395 NM_028860 74302 Mm.425669 NM_028860 ENSMUSG00000034354 Mtmr3 1700092A20Rik|AI255150|AW557713|FYVE-DSP1|ZFYVE10|mKIAA0371 myotubularin related protein 3 protein-coding common_peak1_47_443_-0.554028087071654_8.51740182281428_6.13090105773098-2 chr6 41543729 41544798 + 6.13090105773098 NA Intergenic Intergenic 22487 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak1_117_704_0.370659268942026_9.64680908175717_6.13071557549476 chr8 111093892 111095375 + 6.13071557549476 NA promoter-TSS (NM_198308) promoter-TSS (NM_198308) -112 NM_198308 319518 Mm.28350 NM_198308 ENSMUSG00000033624 Pdpr 4930402E16Rik|AU018056|mKIAA1990 pyruvate dehydrogenase phosphatase regulatory subunit protein-coding common_peak2_18_183_-0.923197752660123_7.06196307972695_6.13058765025169 chr9 110333111 110334004 + 6.13058765025169 NA intron (NM_001001144, intron 1 of 22) CpG 201 NM_001001144 235623 Mm.288741 NM_001001144 ENSMUSG00000032485 Scap 9530044G19|mKIAA0199 SREBF chaperone protein-coding common_peak1_15_158_-1.01662969215919_6.80456810920476_6.1301409143765 chr14 14348037 14348439 + 6.1301409143765 NA intron (NM_008369, intron 3 of 11) intron (NM_008369, intron 3 of 11) 1743 NM_008369 16188 Mm.425857 NM_008369 ENSMUSG00000068758 Il3ra CD123|CDw123|SUT-1 interleukin 3 receptor, alpha chain protein-coding common_peak2_154_1549_-0.283264708548973_10.4564201458871_6.1273961264884 chr11 88160015 88162541 + 6.1273961264884 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) -8287 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding unique_peak2_44_415_-0.574261080576461_8.41330917785286_6.12590733964973 chr18 39144150 39146431 + 6.12590733964973 NA intron (NM_175164, intron 10 of 22) B1_Mus1|SINE|Alu 152145 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak2_118_712_0.369314103795755_9.66241531834177_6.12544812070558 chr7 127572309 127574714 + 6.12544812070558 NA intron (NM_026888, intron 1 of 9) intron (NM_026888, intron 1 of 9) 163 NM_026888 68961 Mm.274473 NM_026888 ENSMUSG00000030815 Phkg2 1500017I02Rik phosphorylase kinase, gamma 2 (testis) protein-coding common_peak2_250_1963_0.228218266499306_11.0536883475643_6.12509535528642 chr16 49790148 49794639 + 6.12509535528642 NA Intergenic Intergenic -63261 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_22_218_-0.836326255507664_7.35662393184734_6.12485959348955 chr1 179828564 179829025 + 6.12485959348955 NA Intergenic PB1D10|SINE|Alu -24779 NM_026375 226747 Mm.128165 NM_026375 ENSMUSG00000026491 Ahctf1 6230412P20Rik|AV011447|Elys AT hook containing transcription factor 1 protein-coding common_peak2_139_1383_-0.29995789074048_10.2846492822665_6.12172280913309 chr9 121709581 121711577 + 6.12172280913309 NA intron (NM_026794, intron 1 of 2) CpG 190 NM_026794 26901 Mm.24848 NM_026794 ENSMUSG00000032526 Ss18l2 1110020I04Rik|AI463209|Deb1 SS18, nBAF chromatin remodeling complex subunit like 2 protein-coding common_peak1_69_654_-0.447293070714922_9.13170456106735_6.12148255546058 chr16 52129110 52130220 + 6.12148255546058 NA intron (NM_001033238, intron 4 of 17) intron (NM_001033238, intron 4 of 17) 98116 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak2_62_586_-0.47560753315827_8.95941292653092_6.12090655100179 chr12 55123924 55125272 + 6.12090655100179 NA promoter-TSS (NM_028527) promoter-TSS (NM_028527) 70 NM_028527 73385 Mm.439875 NM_028527 ENSMUSG00000095595 Fam177a 1700047I17Rik|1700047I17Rik1|C14orf24|D730001C10Rik|Fam177a1 family with sequence similarity 177, member A protein-coding common_peak1_171_1739_-0.265919798109428_10.6319116916814_6.12050592522431 chr9 65195810 65197252 + 6.12050592522431 NA Intergenic Intergenic -18159 NM_177460 214424 Mm.31129 NM_177460 ENSMUSG00000032392 Parp16 ARTD15|BC055447|C79952|PARP-16 poly (ADP-ribose) polymerase family, member 16 protein-coding common_peak1_74_704_-0.431329738996489_9.24581457778791_6.12009152296598 chr9 69033863 69035157 + 6.12009152296598 NA intron (NM_013646, intron 1 of 10) intron (NM_013646, intron 1 of 10) -255331 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding unique_peak1_13_20_1.66763501605281_5.22613493080517_6.12007633484553-2 chr16 17807229 17807623 + 6.12007633484553 NA exon (NM_153790, exon 11 of 11) exon (NM_153790, exon 11 of 11) 10144 NM_153790 224024 Mm.194950 NM_153790 ENSMUSG00000012017 Scarf2 NSR1|SREC-II|SRECRP-1|Scatf1|Srec2|SrecII scavenger receptor class F, member 2 protein-coding unique_peak1_13_20_1.66763501605281_5.22613493080517_6.12007633484553-3 chr6 99030496 99030892 + 6.12007633484553 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) -2396 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak1_13_20_1.66763501605281_5.22613493080517_6.12007633484553 chr16 4594840 4595167 + 6.12007633484553 NA intron (NM_031184, intron 1 of 6) CpG 290 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak1_31_297_-0.696302946150638_7.87101704738684_6.1198210551926 chr11 30187661 30188405 + 6.1198210551926 NA intron (NM_175836, intron 1 of 34) RSINE1|SINE|B4 10224 NM_009260 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding unique_peak2_31_297_-0.696302946150638_7.87101704738684_6.1198210551926 chr8 83954616 83956436 + 6.1198210551926 NA promoter-TSS (NM_024184) promoter-TSS (NM_024184) -168 NM_024184 66929 Mm.29680 NM_024184 ENSMUSG00000005470 Asf1b 1700003K02Rik|AA409591 anti-silencing function 1B histone chaperone protein-coding common_peak2_31_297_-0.696302946150638_7.87101704738684_6.1198210551926 chr7 45567701 45569354 + 6.1198210551926 NA intron (NR_038165, intron 3 of 3) intron (NR_038165, intron 3 of 3) -1626 NM_009737 12036 Mm.24210 NM_009737 ENSMUSG00000030826 Bcat2 Bcat-2|Eca40 branched chain aminotransferase 2, mitochondrial protein-coding common_peak2_50_207_0.647231058986365_8.02405524763427_6.11921440513316 chr10 8746227 8747947 + 6.11921440513316 NA intron (NM_175155, intron 10 of 19) intron (NM_175155, intron 10 of 19) 138983 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding common_peak2_214_1597_0.251781064204295_10.7679422250301_6.11782477699139 chr2 180041362 180043520 + 6.11782477699139 NA promoter-TSS (NM_011969) promoter-TSS (NM_011969) 23 NM_001289476 26444 Mm.21728 NM_011969 ENSMUSG00000027566 Psma7 C6-I proteasome (prosome, macropain) subunit, alpha type 7 protein-coding common_peak1_214_1597_0.251781064204295_10.7679422250301_6.11782477699139 chr2 158733242 158735777 + 6.11782477699139 NA intron (NM_153089, intron 2 of 10) intron (NM_153089, intron 2 of 10) -33590 NM_027975 71878 Mm.85162 NM_027975 ENSMUSG00000027654 Fam83d 2310007D09Rik|BB104611 family with sequence similarity 83, member D protein-coding common_peak2_177_1238_0.284670207809942_10.4172955760456_6.11591159661735 chr6 59208302 59210112 + 6.11591159661735 NA intron (NM_001081145, intron 1 of 1) intron (NM_001081145, intron 1 of 1) 337 NM_001081145 68140 Mm.25843 NM_001081145 ENSMUSG00000049232 Tigd2 3632410O17Rik tigger transposable element derived 2 protein-coding common_peak1_137_875_0.334420571831977_9.94199734551716_6.11570830038681 chr19 57119770 57121339 + 6.11570830038681 NA intron (NM_001290813, intron 6 of 20) intron (NM_001290813, intron 6 of 20) -1530 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_175_1219_0.286969243802771_10.3961500543516_6.11519867637992 chr7 118797425 118801059 + 6.11519867637992 NA intron (NM_027815, intron 19 of 30) intron (NM_027815, intron 19 of 30) 56371 NM_001168220 66356 Mm.482278 NM_023197 ENSMUSG00000030980 Knop1 2310008H09Rik|Tsg118 lysine rich nucleolar protein 1 protein-coding common_peak1_60_567_-0.485227668457709_8.90713328527583_6.11258622023007 chr6 113531079 113531917 + 6.11258622023007 NA promoter-TSS (NM_001033244) promoter-TSS (NM_001033244) 140 NM_175101 66087 Mm.275989 NM_175101 ENSMUSG00000030286 Emc3 0610039A15Rik|AI225901|AW260416|Pob|Tmem111 ER membrane protein complex subunit 3 protein-coding common_peak1_195_2014_-0.246463264131933_10.8533324913494_6.11098308005191 chr2 31060546 31062528 + 6.11098308005191 NA intron (NM_001177648, intron 6 of 16) intron (NM_001177648, intron 6 of 16) 34963 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_26_252_-0.760786007854716_7.60260057076695_6.11085510660522 chr4 133751159 133751615 + 6.11085510660522 NA intron (NM_001080819, intron 1 of 19) intron (NM_001080819, intron 1 of 19) 2224 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding unique_peak2_30_288_-0.708243477766372_7.82080394361749_6.11065950628504 chr17 88667567 88669516 + 6.11065950628504 NA promoter-TSS (NM_023630) promoter-TSS (NM_023630) -119 NM_023630 71828 Mm.61330 NM_023630 ENSMUSG00000024154 Gtf2a1l 1700011N16Rik|Alf|Gtf2a1lf general transcription factor IIA, 1-like protein-coding unique_peak2_19_191_-0.89382827309038_7.13804836417597_6.10934086864891-2 chr19 42149034 42150490 + 6.10934086864891 NA intron (NM_183195, intron 1 of 1) intron (NM_183195, intron 1 of 1) 2373 NM_183195 277010 Mm.206250 NM_183195 ENSMUSG00000044345 Marveld1 AI504298|Mrvldc1 MARVEL (membrane-associating) domain containing 1 protein-coding common_peak1_32_103_0.876880229519788_7.13887983290099_6.10934086864891-2 chr3 21960889 21961587 + 6.10934086864891 NA Intergenic Intergenic -115414 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_19_191_-0.89382827309038_7.13804836417597_6.10934086864891-2 chr9 56265307 56265686 + 6.10934086864891 NA intron (NM_172924, intron 3 of 6) intron (NM_172924, intron 3 of 6) -104426 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_32_103_0.876880229519788_7.13887983290099_6.10934086864891 chr15 76228992 76229613 + 6.10934086864891 NA intron (NM_011117, intron 1 of 31) CpG 195 NM_201385 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding unique_peak2_19_191_-0.89382827309038_7.13804836417597_6.10934086864891 chr19 29354890 29355793 + 6.10934086864891 NA intron (NM_026362, intron 3 of 5) intron (NM_026362, intron 3 of 5) 6530 NM_026362 67759 Mm.275511 NM_026362 ENSMUSG00000016495 Plgrkt 1110007H22Rik|5033414D02Rik|AI852040|Plg-R(KT)|Plg-RKT plasminogen receptor, C-terminal lysine transmembrane protein protein-coding common_peak1_19_191_-0.89382827309038_7.13804836417597_6.10934086864891 chr5 105239030 105239499 + 6.10934086864891 NA intron (NM_001039646, intron 1 of 10) intron (NM_001039646, intron 1 of 10) 269 NM_001039646 626578 Mm.275893 NM_001039646 ENSMUSG00000105096 Gbp10 - guanylate-binding protein 10 protein-coding common_peak2_340_2940_0.187972548975093_11.6160773433746_6.10839785653831 chr1 133687765 133692841 + 6.10839785653831 NA promoter-TSS (NM_001159649) promoter-TSS (NM_001159649) -195 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding unique_peak2_12_132_-1.12647350204661_6.49204568447788_6.10813737514094 chr11 119109058 119110156 + 6.10813737514094 NA Intergenic Intergenic -23370 NM_007625 12418 Mm.268070 NM_007625 ENSMUSG00000039989 Cbx4 MPc2|PC2 chromobox 4 protein-coding unique_peak2_12_132_-1.12647350204661_6.49204568447788_6.10813737514094-2 chr17 34631598 34632459 + 6.10813737514094 NA intron (NM_030890, intron 3 of 3) intron (NM_030890, intron 3 of 3) 2342 NM_030890 260297 Mm.390965 NM_030890 ENSMUSG00000015476 Prrt1 Bat-4|Bat4|D17H6S54E|DSPD1|G5b|NG5|ORF31 proline-rich transmembrane protein 1 protein-coding unique_peak2_12_132_-1.12647350204661_6.49204568447788_6.10813737514094-3 chr9 120943203 120944363 + 6.10813737514094 NA intron (NM_007614, intron 1 of 14) intron (NM_007614, intron 1 of 14) 10205 NM_001165902 12387 Mm.291928 NM_007614 ENSMUSG00000006932 Ctnnb1 Bfc|Catnb|Mesc catenin (cadherin associated protein), beta 1 protein-coding common_peak1_58_548_-0.495135933963374_8.85309437202351_6.10784631868523 chr9 65215104 65216032 + 6.10784631868523 NA exon (NM_177460, exon 2 of 7) exon (NM_177460, exon 2 of 7) 878 NM_177460 214424 Mm.31129 NM_177460 ENSMUSG00000032392 Parp16 ARTD15|BC055447|C79952|PARP-16 poly (ADP-ribose) polymerase family, member 16 protein-coding common_peak1_24_235_-0.796627857225458_7.48432912074911_6.10767709202665 chr10 81350060 81350516 + 6.10767709202665 NA 5' UTR (NM_001163165, exon 1 of 10) 5' UTR (NM_001163165, exon 1 of 10) 138 NM_001163165 15353 Mm.38474 NM_010440 ENSMUSG00000020232 Hmg20b AW610687|BRAF35|Hmgx2|Hmgxb2|Smarce1r high mobility group 20B protein-coding common_peak1_40_378_-0.604610773105667_8.26374865161826_6.10562694143056 chrX 167200808 167201457 + 6.10562694143056 NA Intergenic Intergenic 8086 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_54_232_0.617104873731636_8.1727385815201_6.10555445888757 chr14 76010277 76011051 + 6.10555445888757 NA intron (NM_026816, intron 1 of 7) CpG 201 NM_026816 68705 Mm.20415 NM_026816 ENSMUSG00000067995 Gtf2f2 1110031C13Rik|AI326315 general transcription factor IIF, polypeptide 2 protein-coding common_peak2_44_170_0.708326122678733_7.77201557622526_6.10478028593971 chr9 44478926 44480248 + 6.10478028593971 NA Intergenic Intergenic -19549 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak1_29_279_-0.720626584347264_7.76896972477133_6.10478028593971 chr5 31192521 31193059 + 6.10478028593971 NA promoter-TSS (NM_153680) promoter-TSS (NM_153680) 349 NM_001127355 13667 Mm.29394 NM_010122 ENSMUSG00000029145 Eif2b4 Eif2b eukaryotic translation initiation factor 2B, subunit 4 delta protein-coding unique_peak2_28_270_-0.733485726841303_7.71540617793322_6.10255483793257 chr9 94532909 94534492 + 6.10255483793257 NA intron (NM_001033145, intron 1 of 2) intron (NM_001033145, intron 1 of 2) 4381 NM_001033145 68861 Mm.258746 NM_001033145 ENSMUSG00000045414 1190002N15Rik GoPro49|HASF RIKEN cDNA 1190002N15 gene protein-coding common_peak2_123_1210_-0.322076322587311_10.0809449884007_6.10092388598441 chr7 4792136 4793981 + 6.10092388598441 NA promoter-TSS (NM_009081) promoter-TSS (NM_009081) 93 NM_009081 19943 Mm.379002 NM_009081 ENSMUSG00000030432 Rpl28 D7Wsu21e ribosomal protein L28 protein-coding common_peak2_554_5532_0.138177545800191_12.5029349813429_6.10049072787898 chr9 44602201 44606837 + 6.10049072787898 NA promoter-TSS (NM_007841) promoter-TSS (NM_007841) -373 NM_001110826 13209 Mm.267061 NM_007841 ENSMUSG00000032097 Ddx6 1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein-coding common_peak2_495_4786_0.148225358759962_12.2990187700997_6.09994115292378 chr6 56795809 56799018 + 6.09994115292378 NA intron (NM_145958, intron 1 of 3) CpG 400 NM_145958 210973 Mm.57295 NM_145958 ENSMUSG00000059486 Kbtbd2 BC022962|Bklhd1|mKIAA1489 kelch repeat and BTB (POZ) domain containing 2 protein-coding common_peak1_23_59_1.10688487248358_6.46033303185031_6.09933483441025-2 chr14 25855739 25856229 + 6.09933483441025 NA intron (NM_013469, intron 1 of 14) intron (NM_013469, intron 1 of 14) 13829 NM_013469 11744 Mm.294083 NM_013469 ENSMUSG00000021866 Anxa11 A830099O17Rik|Anx11 annexin A11 protein-coding common_peak1_23_59_1.10688487248358_6.46033303185031_6.09933483441025-3 chr7 24506949 24507460 + 6.09933483441025 NA non-coding (NR_110958, exon 1 of 3) non-coding (NR_110958, exon 1 of 3) 117 NR_110958 232969 Mm.181332 NM_146183 ENSMUSG00000064264 Zfp428 2410005H09Rik|AV271806|AW047854|Znf428 zinc finger protein 428 protein-coding unique_peak1_23_59_1.10688487248358_6.46033303185031_6.09933483441025 chr5 36358651 36359288 + 6.09933483441025 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 39170 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak1_23_59_1.10688487248358_6.46033303185031_6.09933483441025 chr10 84584722 84585235 + 6.09933483441025 NA exon (NM_146008, exon 2 of 10) exon (NM_146008, exon 2 of 10) 8031 NM_146008 216198 Mm.296142 NM_146008 ENSMUSG00000020034 Tcp11l2 E430026E19Rik t-complex 11 (mouse) like 2 protein-coding common_peak1_23_59_1.10688487248358_6.46033303185031_6.09933483441025-4 chr7 120705906 120706421 + 6.09933483441025 NA intron (NM_001164580, intron 1 of 2) L1M5|LINE|L1 28543 NM_001164580 233812 Mm.276479 NM_001164580 ENSMUSG00000046096 BC030336 - cDNA sequence BC030336 protein-coding common_peak2_385_3457_0.173695449990332_11.8425698786374_6.09696837235327 chr7 127013651 127017584 + 6.09696837235327 NA intron (NM_030240, intron 2 of 2) intron (NM_030240, intron 2 of 2) -1023 NM_080638 78388 Mm.228797 NM_080638 ENSMUSG00000030681 Mvp 2310009M24Rik|LRP|VAULT1 major vault protein protein-coding common_peak2_35_332_-0.648080694012238_8.05533802006514_6.09659250769536 chr1 46863520 46865174 + 6.09659250769536 NA Intergenic Intergenic -10838 NM_172653 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding common_peak1_207_1528_0.256885486839195_10.7068154347804_6.09505702531237 chr2 180041701 180043327 + 6.09505702531237 NA promoter-TSS (NM_011969) promoter-TSS (NM_011969) 31 NM_178750 269397 Mm.63068 NM_178750 ENSMUSG00000039086 Ss18l1 A230053O16Rik|CREST SS18, nBAF chromatin remodeling complex subunit like 1 protein-coding common_peak1_63_595_-0.469690634964282_8.98432320298002_6.09384403238642 chr7 75893006 75894088 + 6.09384403238642 NA Intergenic MER34|LTR|ERV1 45209 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding unique_peak1_18_38_1.31496198453464_5.94288321112957_6.09365555874015 chr9 107287707 107288225 + 6.09365555874015 NA intron (NM_001316691, intron 1 of 7) intron (NM_001316691, intron 1 of 7) 1430 NM_001316691 102626 Mm.222612 NM_178907 ENSMUSG00000032577 Mapkapk3 3PK|AI874665|MAPKAP-K3|MAPKAP3|MK-3|MK3|MapkKapk3 mitogen-activated protein kinase-activated protein kinase 3 protein-coding common_peak1_18_38_1.31496198453464_5.94288321112957_6.09365555874015-2 chr9 75540514 75540937 + 6.09365555874015 NA intron (NM_016963, intron 1 of 9) intron (NM_016963, intron 1 of 9) 18932 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak1_18_38_1.31496198453464_5.94288321112957_6.09365555874015 chr7 24507553 24507970 + 6.09365555874015 NA intron (NR_110958, intron 1 of 2) CpG 674 NR_110958 232969 Mm.181332 NM_146183 ENSMUSG00000064264 Zfp428 2410005H09Rik|AV271806|AW047854|Znf428 zinc finger protein 428 protein-coding common_peak2_53_499_-0.516964406636136_8.70730208134402_6.09302987985197 chrX 134541045 134542179 + 6.09302987985197 NA promoter-TSS (NM_013898) promoter-TSS (NM_013898) 58 NM_013898 30058 Mm.214504 NM_013898 ENSMUSG00000048007 Timm8a1 DXHXS1274E|Ddp1|Fci-12|Tim8a|Timm8a translocase of inner mitochondrial membrane 8A1 protein-coding common_peak2_182_1863_-0.255532177454024_10.7364200559273_6.09263493975438 chr9 21014465 21017984 + 6.09263493975438 NA intron (NM_010493, intron 1 of 6) intron (NM_010493, intron 1 of 6) 264 NM_010493 15894 Mm.435508 NM_010493 ENSMUSG00000037405 Icam1 CD54|Icam-1|Ly-47|MALA-2 intercellular adhesion molecule 1 protein-coding common_peak2_41_153_0.737300414289954_7.63543674783988_6.09254857403988 chr1 75435800 75436519 + 6.09254857403988 NA intron (NM_133708, intron 1 of 12) intron (NM_133708, intron 1 of 12) 216 NM_133708 69080 Mm.23951 NM_133708 ENSMUSG00000033021 Gmppa 1810012N01Rik GDP-mannose pyrophosphorylase A protein-coding common_peak2_25_244_-0.781216694361639_7.54602959182175_6.09166583945979 chr4 132749006 132750127 + 6.09166583945979 NA intron (NM_133888, intron 1 of 7) T-rich|Low_complexity|Low_complexity 7605 NM_133888 100340 Mm.287187 NM_133888 ENSMUSG00000028885 Smpdl3b 1110054A24Rik|AU045240|Asml3b sphingomyelin phosphodiesterase, acid-like 3B protein-coding common_peak1_46_434_-0.561740503310073_8.48400133908105_6.09156601289029 chr9 96399023 96399837 + 6.09156601289029 NA Intergenic B1F|SINE|Alu -35131 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak1_528_5201_0.142266905864286_12.4159841368751_6.09026995050258 chr6 119197638 119202788 + 6.09026995050258 NA intron (NM_001033379, intron 4 of 8) intron (NM_001033379, intron 4 of 8) -3804 NM_001255999 12288 Mm.41628 NM_009781 ENSMUSG00000051331 Cacna1c Cav1.2|Cchl1a1|D930026N18Rik|MBC|MELC-CC calcium channel, voltage-dependent, L type, alpha 1C subunit protein-coding common_peak1_85_813_-0.396545502825942_9.47061223285328_6.08912905344646 chr3 87768037 87769167 + 6.08912905344646 NA intron (NM_001289601, intron 1 of 24) intron (NM_001289601, intron 1 of 24) 351 NM_001032413 73182 Mm.158962 NM_028460 ENSMUSG00000028073 Pear1 3110045G13Rik|Jedi-1|Megf12 platelet endothelial aggregation receptor 1 protein-coding common_peak2_92_885_-0.380346167667428_9.6009898047213_6.08808839310682 chr2 166699379 166702980 + 6.08808839310682 NA intron (NR_105783, intron 2 of 2) L2a|LINE|L2 12653 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding common_peak2_22_55_1.13110588203591_6.37290786307556_6.08788544209888 chr17 47513464 47513967 + 6.08788544209888 NA intron (NM_001081635, intron 1 of 6) MamTip2|DNA|hAT-Tip100 8664 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_22_55_1.13110588203591_6.37290786307556_6.08788544209888 chr14 79300514 79300947 + 6.08788544209888 NA exon (NM_025427, exon 2 of 5) exon (NM_025427, exon 2 of 5) 905 NM_025427 66214 Mm.29811 NM_025427 ENSMUSG00000022018 Rgcc 1190002H23Rik|Rgc-32|Rgc32 regulator of cell cycle protein-coding unique_peak2_11_123_-1.16703315348114_6.37067973364631_6.08788544209885 chr10 43979941 43980939 + 6.08788544209885 NA intron (NM_172393, intron 6 of 19) intron (NM_172393, intron 6 of 19) 24406 NM_172393 11630 Mm.292082 NM_172393 ENSMUSG00000019866 Aim1 AI462491|AI463325 absent in melanoma 1 protein-coding common_peak1_11_123_-1.16703315348114_6.37067973364631_6.08788544209885 chr13 120300890 120301261 + 6.08788544209885 NA 5' UTR (NM_001037925, exon 2 of 5) 5' UTR (NM_001037925, exon 2 of 5) 683 NM_001037925 625360 Mm.327506 NM_001037925 ENSMUSG00000094796 BC147527 - cDNA sequence BC147527 protein-coding unique_peak2_11_123_-1.16703315348114_6.37067973364631_6.08788544209885-2 chr10 89747865 89748502 + 6.08788544209885 NA intron (NM_029166, intron 1 of 20) intron (NM_029166, intron 1 of 20) 3192 NM_029166 75089 Mm.268922 NM_029166 ENSMUSG00000019951 Uhrf1bp1l 2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701 UHRF1 (ICBP90) binding protein 1-like protein-coding unique_peak2_31_98_0.893508954231915_7.07611109719557_6.08787507846609 chr9 40783764 40784586 + 6.08787507846609 NA TTS (NM_133733) TTS (NM_133733) -17098 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding unique_peak1_15_27_1.48889834106756_5.55180409259139_6.0871496622179-2 chrX 136270488 136270897 + 6.0871496622179 NA intron (NM_001110234, intron 1 of 2) G-rich|Low_complexity|Low_complexity 439 NM_001110234 12070 Mm.90787 NM_009750 ENSMUSG00000046432 Bex3 AL033356|DXWsu67e|Gcap27|Nade|Ngfrap1 brain expressed X-linked 3 protein-coding unique_peak1_15_27_1.48889834106756_5.55180409259139_6.0871496622179 chr11 85713862 85714281 + 6.0871496622179 NA intron (NR_045875, intron 1 of 5) intron (NR_045875, intron 1 of 5) 5673 NR_045875 71489 Mm.442482 NR_045875 ENSMUSG00000086199 Bcas3os1 8430403D17Rik breast carcinoma amplified sequence 3, opposite strand 1 ncRNA common_peak1_15_27_1.48889834106756_5.55180409259139_6.0871496622179 chr13 54503330 54503701 + 6.0871496622179 NA promoter-TSS (NM_176987) promoter-TSS (NM_176987) -290 NM_176987 319719 Mm.376151 NM_176987 ENSMUSG00000043183 Simc1 4732471D19Rik SUMO-interacting motifs containing 1 protein-coding common_peak1_118_1156_-0.329100778867845_10.0116227596736_6.08710329934383 chr7 126284380 126286307 + 6.08710329934383 NA intron (NM_145587, intron 1 of 3) (TG)n|Simple_repeat|Simple_repeat 12724 NM_145587 104175 Mm.29660 NM_145587 ENSMUSG00000042978 Sbk1 Sbk SH3-binding kinase 1 protein-coding common_peak2_136_1350_-0.303474402790826_10.2480747579303_6.08659620140906 chr16 36070961 36072459 + 6.08659620140906 NA promoter-TSS (NM_001159421) promoter-TSS (NM_001159421) 50 NM_001159421 381045 Mm.310434 NM_198645 ENSMUSG00000075229 Ccdc58 A930007B11Rik|AI413631 coiled-coil domain containing 58 protein-coding common_peak2_57_537_-0.496186736857698_8.82336899412777_6.08559182553028-2 chrX 75514095 75515400 + 6.08559182553028 NA intron (NM_011692, intron 1 of 5) intron (NM_011692, intron 1 of 5) 450 NM_011692 22327 Mm.8294 NM_011692 ENSMUSG00000031197 Vbp1 VBP-1 von Hippel-Lindau binding protein 1 protein-coding common_peak2_57_537_-0.496186736857698_8.82336899412777_6.08559182553028 chr6 86364536 86366478 + 6.08559182553028 NA promoter-TSS (NM_025591) promoter-TSS (NM_025591) -176 NM_025591 66488 Mm.422972 NM_025591 ENSMUSG00000057497 Fam136a 2010309E21Rik|AW124904|Hyccin family with sequence similarity 136, member A protein-coding common_peak2_112_1092_-0.338558187499505_9.92479859192215_6.0852246315202 chr7 110120982 110123324 + 6.0852246315202 NA promoter-TSS (NM_009516) promoter-TSS (NM_009516) 94 NM_009516 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding common_peak2_204_1499_0.258802066560504_10.6801478186635_6.08465495130181 chr11 95712220 95715397 + 6.08465495130181 NA Intergenic Intergenic -1054 NR_045780 432396 Mm.426849 NR_045780 ENSMUSG00000086191 Zfp652os 1110035M17Rik zinc finger protein 652, opposite strand ncRNA common_peak2_349_3043_0.184410969084665_11.6639581280459_6.08452936542281 chr12 4916700 4919103 + 6.08452936542281 NA exon (NM_001099628, exon 1 of 31) exon (NM_001099628, exon 1 of 31) 548 NM_001099628 320817 Mm.210966 NM_001099628 ENSMUSG00000052812 Atad2b 1110014E10Rik|BC032887|C79189|D530031C13Rik ATPase family, AAA domain containing 2B protein-coding common_peak1_137_1361_-0.302303356578921_10.2603593097226_6.0823087256761 chr17 29549610 29551239 + 6.0823087256761 NA promoter-TSS (NM_001162901) promoter-TSS (NM_001162901) 622 NM_198647 381085 Mm.328934 NM_198647 ENSMUSG00000042203 Tbc1d22b BC045600 TBC1 domain family, member 22B protein-coding common_peak1_215_1608_0.250095889675217_10.7769965555611_6.08139829984446 chr13 48869460 48871684 + 6.08139829984446 NA intron (NM_011078, intron 1 of 21) GC_rich|Low_complexity|Low_complexity 313 NM_011078 18676 Mm.486213 NM_011078 ENSMUSG00000038025 Phf2 GRC5 PHD finger protein 2 protein-coding common_peak2_48_452_-0.54649100313555_8.55012173847846_6.08089615421135 chr3 116379840 116381369 + 6.08089615421135 NA intron (NM_001080818, intron 4 of 15) intron (NM_001080818, intron 4 of 15) 43428 NM_001080818 229776 Mm.17647 NM_001080818 ENSMUSG00000033502 Cdc14a A830059A17Rik|CDC14A2|CDC14a1|Cdc14 CDC14 cell division cycle 14A protein-coding common_peak1_507_4937_0.145724195403973_12.3425732188448_6.08036368774279 chr4 125125034 125128568 + 6.08036368774279 NA exon (NM_153159, exon 2 of 6) exon (NM_153159, exon 2 of 6) 1080 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak1_16_166_-0.98016803149988_6.89362027672411_6.08000611594672 chr10 61335212 61335617 + 6.08000611594672 NA intron (NM_013753, intron 18 of 19) (TA)n|Simple_repeat|Simple_repeat 37578 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak1_16_166_-0.98016803149988_6.89362027672411_6.08000611594672-2 chr17 27027114 27027594 + 6.08000611594672 NA intron (NM_007523, intron 1 of 5) intron (NM_007523, intron 1 of 5) 1272 NM_007523 12018 Mm.2443 NM_007523 ENSMUSG00000057789 Bak1 Bak|N-BAK1|N-Bak BCL2-antagonist/killer 1 protein-coding unique_peak2_16_166_-0.98016803149988_6.89362027672411_6.08000611594672 chr2 142903060 142903793 + 6.08000611594672 NA non-coding (NR_131921, exon 2 of 2) non-coding (NR_131921, exon 2 of 2) 461 NR_131921 75053 Mm.72638 NR_131921 ENSMUSG00000086504 Kif16bos 4930511F01Rik kinesin family member 16B, opposite strand ncRNA common_peak1_500_5919_-0.140500338675071_12.4611312911788_6.07922441133943 chr4 129818377 129822661 + 6.07922441133943 NA promoter-TSS (NM_008974) promoter-TSS (NM_008974) 40 NM_008974 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding common_peak2_76_723_-0.423124346310139_9.28828371392814_6.07910201623856 chr13 97406148 97409528 + 6.07910201623856 NA Intergenic Intergenic -27132 NR_110432 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 ENSMUSG00000078952|Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA common_peak2_81_420_0.470379153185387_8.95286599965909_6.07874921878069 chr2 37702387 37704023 + 6.07874921878069 NA Intergenic CpG -55920 NM_009261 20744 Mm.237095 NM_009261 ENSMUSG00000026915 Strbp 6430510M02Rik|AI852513|C230082I21Rik|C86322|Spnr spermatid perinuclear RNA binding protein protein-coding common_peak1_97_936_-0.368416689562146_9.68769689287811_6.07830951360525 chr1 60097761 60099083 + 6.07830951360525 NA promoter-TSS (NM_001199061) promoter-TSS (NM_001199061) 78 NM_001199060 57750 Mm.281079 NM_021312 ENSMUSG00000026019 Wdr12 4933402C23Rik|Ytm1|Ytm1p WD repeat domain 12 protein-coding common_peak1_49_201_0.654416020570946_7.98541949303727_6.07797071848859 chr5 73264671 73265706 + 6.07797071848859 NA Intergenic ORR1C1|LTR|ERVL-MaLR -8570 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_100_566_0.409643268663229_9.35202655927384_6.07742608248905 chr12 12263395 12264930 + 6.07742608248905 NA intron (NM_001146119, intron 1 of 11) intron (NM_001146119, intron 1 of 11) 2023 NM_001146119 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding common_peak1_59_557_-0.488852568045127_8.87969502780662_6.07626238938266 chr7 127345011 127346138 + 6.07626238938266 NA promoter-TSS (NM_146202) promoter-TSS (NM_146202) -260 NM_146202 233890 Mm.23031 NM_146202 ENSMUSG00000047371 Zfp768 BC026432|Znf768 zinc finger protein 768 protein-coding common_peak1_34_323_-0.658404288361091_8.01064785870408_6.0761128377691 chr10 81510547 81511162 + 6.0761128377691 NA intron (NM_010304, intron 4 of 6) intron (NM_010304, intron 4 of 6) -10717 NM_010102 13611 Mm.33065 NM_010102 ENSMUSG00000044199 S1pr4 Edg6|Lpc1|S1p4 sphingosine-1-phosphate receptor 4 protein-coding common_peak1_34_323_-0.658404288361091_8.01064785870408_6.0761128377691-2 chr3 60476080 60476867 + 6.0761128377691 NA intron (NM_001253713, intron 2 of 9) L1Md_F2|LINE|L1 3643 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_201_1470_0.260878973536983_10.6530210180233_6.07507163167808 chr17 78735393 78737661 + 6.07507163167808 NA promoter-TSS (NM_011500) promoter-TSS (NM_011500) 33 NM_011500 268980 Mm.311915 NM_011500 ENSMUSG00000024077 Strn AU022939|D130055P19 striatin, calmodulin binding protein protein-coding common_peak2_30_93_0.912093353056669_7.01063552820597_6.071094863568 chr11 5296145 5296873 + 6.071094863568 NA intron (NM_001080924, intron 2 of 8) intron (NM_001080924, intron 2 of 8) -34899 NM_032396 84035 Mm.209989 NM_032396 ENSMUSG00000020393 Kremen1 AV002070|Kremen|Krm1 kringle containing transmembrane protein 1 protein-coding common_peak1_40_147_0.751989899436476_7.58544831534719_6.07090028691785-2 chr18 80532820 80533533 + 6.07090028691785 NA Intergenic Intergenic 11370 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_40_147_0.751989899436476_7.58544831534719_6.07090028691785-3 chr2 132114119 132114898 + 6.07090028691785 NA intron (NM_018824, intron 1 of 15) intron (NM_018824, intron 1 of 15) 30600 NM_018824 54338 Mm.103581 NM_018824 ENSMUSG00000027340 Slc23a2 AI844736|NBTL1|SVCT2|Slc23a1|YSPL2|YSPL3|mKIAA0238 solute carrier family 23 (nucleobase transporters), member 2 protein-coding common_peak2_40_147_0.751989899436476_7.58544831534719_6.07090028691785 chr5 113164611 113165787 + 6.07090028691785 NA Intergenic Intergenic -1886 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak1_40_147_0.751989899436476_7.58544831534719_6.07090028691785 chr13 112660655 112661316 + 6.07090028691785 NA intron (NM_178746, intron 1 of 14) intron (NM_178746, intron 1 of 14) 219 NM_178746 268706 Mm.40834 NM_175376 ENSMUSG00000047789 Slc38a9 4833412L08Rik|6720411P22Rik|9130023D20Rik|9430067K09Rik|A730092C09 solute carrier family 38, member 9 protein-coding common_peak2_26_73_1.01275420121064_6.71583046623427_6.06665148724816 chr19 10690751 10691438 + 6.06665148724816 NA intron (NM_181403, intron 1 of 4) intron (NM_181403, intron 1 of 4) 2279 NM_181403 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding unique_peak2_14_149_-1.04677456908453_6.70543140595361_6.06665148724816 chr13 114905471 114906577 + 6.06665148724816 NA intron (NM_008396, intron 1 of 29) L1Md_F2|LINE|L1 26017 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak2_210_1558_0.254194126441178_10.7335022759184_6.06611050841399 chr11 100735482 100739133 + 6.06611050841399 NA intron (NM_001305003, intron 1 of 5) intron (NM_001305003, intron 1 of 5) 908 NM_024456 19345 Mm.29829 NM_024456 ENSMUSG00000019173 Rab5c AI326010|Rabl RAB5C, member RAS oncogene family protein-coding common_peak1_38_359_-0.618909646721813_8.18239827296877_6.06580193298706 chr9 123852102 123852630 + 6.06580193298706 NA promoter-TSS (NM_148925) promoter-TSS (NM_148925) -467 NM_001110253 17281 Mm.252941 NM_148925 ENSMUSG00000025241 Fyco1 2810409M01Rik|Mem2|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding common_peak2_350_3055_0.183783653878681_11.6693206549751_6.06323104700693 chr2 164878067 164881164 + 6.06323104700693 NA intron (NM_146129, intron 1 of 16) CpG 247 NM_146129 228866 Mm.241134 NM_146129 ENSMUSG00000039849 Pcif1 2310022K11Rik|C20orf67|F730014I05Rik PDX1 C-terminal inhibiting factor 1 protein-coding common_peak1_103_998_-0.355695000778773_9.78649336740303_6.06311830355236 chr4 108327588 108328741 + 6.06311830355236 NA promoter-TSS (NM_027250) promoter-TSS (NM_027250) 12 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding common_peak1_52_489_-0.520896173559459_8.67618985222284_6.06238507251936 chr2 58137058 58137888 + 6.06238507251936 NA intron (NM_139200, intron 7 of 7) intron (NM_139200, intron 7 of 7) 22649 NM_139200 227929 Mm.273905 NM_139200 ENSMUSG00000026832 Cytip A130053M09Rik|AI462064|C80816|Cbp|Cybr|Pscdbp cytohesin 1 interacting protein protein-coding common_peak2_83_793_-0.402295930971746_9.43184723165708_6.06173254354502 chr6 34877276 34878918 + 6.06173254354502 NA promoter-TSS (NM_199145) promoter-TSS (NM_199145) -32 NM_001135611 78412 Mm.248440 NM_199145 ENSMUSG00000046806 3110062M04Rik AL023049|Mri RIKEN cDNA 3110062M04 gene protein-coding common_peak1_83_793_-0.402295930971746_9.43184723165708_6.06173254354502 chr2 114654205 114655418 + 6.06173254354502 NA intron (NM_025675, intron 1 of 8) CpG 117 NM_025675 66632 Mm.117809 NM_025675 ENSMUSG00000057147 Dph6 5730421E18Rik|Atpbd4 diphthamine biosynthesis 6 protein-coding common_peak1_109_1060_-0.343305611342494_9.87955613524352_6.06108752236454 chr3 96196962 96198363 + 6.06108752236454 NA promoter-TSS (NM_026975) promoter-TSS (NM_026975) -76 NM_026975 69168 Mm.104531 NM_026975 ENSMUSG00000015943 Bola1 1810037G04Rik bolA-like 1 (E. coli) protein-coding common_peak2_109_1060_-0.343305611342494_9.87955613524352_6.06108752236454 chr1 52038319 52041984 + 6.06108752236454 NA intron (NM_011487, intron 3 of 23) intron (NM_011487, intron 3 of 23) 31911 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 protein-coding common_peak1_264_2111_0.21945323296298_11.1541207358399_6.06095854181212 chr11 69979629 69982031 + 6.06095854181212 NA promoter-TSS (NM_001253700) promoter-TSS (NM_001253700) -338 NM_026017 67181 Mm.41678 NM_026017 ENSMUSG00000018559 Ctdnep1 2610507E10Rik|Dullard CTD nuclear envelope phosphatase 1 protein-coding common_peak1_215_2246_-0.231739908781245_11.0179144547893_6.06071998085076 chr12 21416488 21418405 + 6.06071998085076 NA promoter-TSS (NM_011739) promoter-TSS (NM_011739) -10 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_24_64_1.06364737910793_6.55419150258242_6.05783986898235 chr15 85909944 85910521 + 6.05783986898235 NA intron (NM_009886, intron 24 of 34) intron (NM_009886, intron 24 of 34) 30905 NM_028063 72026 Mm.158211 NM_028063 ENSMUSG00000022386 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding unique_peak2_20_200_-0.87357704738043_7.21426316748871_6.05739806307455 chr13 52800156 52801525 + 6.05739806307455 NA Intergenic B4|SINE|B4 -43635 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak2_20_200_-0.87357704738043_7.21426316748871_6.05739806307455 chr8 13338600 13339616 + 6.05739806307455 NA intron (NM_009361, intron 1 of 11) CpG 304 NM_009361 21781 Mm.925 NM_009361 ENSMUSG00000038482 Tfdp1 Dp1|Drtf1 transcription factor Dp 1 protein-coding common_peak1_20_200_-0.87357704738043_7.21426316748871_6.05739806307455-2 chr4 133844576 133844941 + 6.05739806307455 NA Intergenic B3A|SINE|B2 29973 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding unique_peak2_20_200_-0.87357704738043_7.21426316748871_6.05739806307455-2 chr5 142415975 142417020 + 6.05739806307455 NA intron (NM_199068, intron 1 of 8) intron (NM_199068, intron 1 of 8) 15000 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf forkhead box K1 protein-coding common_peak1_20_200_-0.87357704738043_7.21426316748871_6.05739806307455 chr1 138856394 138856855 + 6.05739806307455 NA exon (NM_001081226, exon 1 of 3) exon (NM_001081226, exon 1 of 3) 230 NM_001081226 69549 Mm.264673 NM_001081226 ENSMUSG00000079283 2310009B15Rik - RIKEN cDNA 2310009B15 gene protein-coding common_peak1_73_362_0.502570224402016_8.75511085019676_6.05725489065028 chr14 54602914 54603605 + 6.05725489065028 NA intron (NM_028890, intron 1 of 6) CpG 2649 NM_028890 74359 Mm.79815 NM_028890 ENSMUSG00000022179 4931414P19Rik - RIKEN cDNA 4931414P19 gene protein-coding common_peak1_64_605_-0.466259463140055_9.01004425190292_6.05695091233775 chr1 171643572 171644817 + 6.05695091233775 NA intron (NM_144539, intron 2 of 7) AT_rich|Low_complexity|Low_complexity -2294 NR_106151 102465784 NR_106151 ENSMUSG00000098316 Mir7683 Gm27950|mmu-mir-7683 microRNA 7683 ncRNA common_peak1_27_78_0.982784001840822_6.79517274909751_6.0563547002156-2 chr9 62421325 62421736 + 6.0563547002156 NA intron (NM_175484, intron 11 of 11) intron (NM_175484, intron 11 of 11) 80187 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_27_78_0.982784001840822_6.79517274909751_6.0563547002156 chr12 77039397 77039973 + 6.0563547002156 NA Intergenic Intergenic -77437 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak2_47_442_-0.550775109276566_8.51577533391674_6.05582254889015 chr17 70924363 70925713 + 6.05582254889015 NA Intergenic Intergenic 65478 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak1_47_442_-0.550775109276566_8.51577533391674_6.05582254889015 chr19 34921401 34922146 + 6.05582254889015 NA promoter-TSS (NM_183046) promoter-TSS (NM_183046) -585 NM_183046 240641 Mm.278471 NM_183046 ENSMUSG00000024795 Kif20b 33cex|B130024C23|C330014J10Rik|Mphosph1|magoo kinesin family member 20B protein-coding common_peak2_36_125_0.802503727711493_7.37853178735566_6.0555321063503 chr9 66261819 66262604 + 6.0555321063503 NA intron (NM_010019, intron 9 of 11) intron (NM_010019, intron 9 of 11) -88239 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak1_119_722_0.364029218019299_9.67986644596077_6.05459551353154 chr2 31973676 31975183 + 6.05459551353154 NA promoter-TSS (NM_172268) promoter-TSS (NM_172268) -21 NM_172268 227720 Mm.289686 NM_172268 ENSMUSG00000001855 Nup214 BC039282|CAN|D2H9S46E nucleoporin 214 protein-coding common_peak1_28_83_0.956345891733807_6.87049036864566_6.05443376663147 chr8 120531233 120531866 + 6.05443376663147 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) -4308 NM_001145897 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_51_214_0.633840706237828_8.06511320270837_6.05358898188068 chr2 29768697 29769653 + 6.05358898188068 NA Intergenic Intergenic 7647 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak2_231_2435_-0.221798169834697_11.139399332989_6.05288716375792 chr10 10183616 10187582 + 6.05288716375792 NA Intergenic Intergenic -284559 NM_001081344 78808 Mm.331751 NM_030191 ENSMUSG00000019790 Stxbp5 0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006 syntaxin binding protein 5 (tomosyn) protein-coding unique_peak2_21_208_-0.847561389386931_7.28357843738742_6.05246570642849 chr1 181456349 181457847 + 6.05246570642849 NA intron (NM_028408, intron 5 of 5) intron (NM_028408, intron 5 of 5) 54353 NM_207280 403180 Mm.220754 NM_207280 ENSMUSG00000050625 Ccdc121 6530421E24Rik|Gm755 coiled-coil domain containing 121 protein-coding common_peak1_35_119_0.824407077450505_7.31909413433377_6.05218354328535 chr7 19577062 19577861 + 6.05218354328535 NA exon (NM_022409, exon 1 of 3) exon (NM_022409, exon 1 of 3) 174 NM_022409 63872 Mm.23310 NM_022409 ENSMUSG00000011267 Zfp296 2210018A16Rik|Znf296 zinc finger protein 296 protein-coding common_peak1_217_1628_0.248583658190475_10.7940627176208_6.05216931213164 chr6 50454698 50456595 + 6.05216931213164 NA intron (NM_001163645, intron 1 of 21) CpG 524 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_19_42_1.26486947292868_6.05869949116644_6.05072338421449 chr14 105732178 105732641 + 6.05072338421449 NA Intergenic Intergenic -108639 NR_105814 102465207 NR_105814 ENSMUSG00000098780 Mir6390 Gm27562|mmu-mir-6390 microRNA 6390 ncRNA common_peak2_493_5821_-0.141317694464686_12.4366402768904_6.05016647431556 chrX 167098859 167113718 + 6.05016647431556 NA Intergenic Intergenic -35918 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak2_57_252_0.592282051004615_8.27913460019662_6.04982081933845 chr1 54901004 54902636 + 6.04982081933845 NA intron (NM_001081433, intron 1 of 27) MIRc|SINE|MIR 24567 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_44_414_-0.570788888669655_8.41157308189946_6.04839934220684 chr2 30464284 30464757 + 6.04839934220684 NA Intergenic Intergenic 9679 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak2_61_279_0.564011498975695_8.41128876643281_6.04839934220674 chrX 139684352 139685510 + 6.04839934220674 NA promoter-TSS (NM_001081499) promoter-TSS (NM_001081499) -65 NM_001081499 245638 Mm.275869 NM_001081499 ENSMUSG00000042473 Tbc1d8b 4921505D17Rik|9030605E16Rik TBC1 domain family, member 8B protein-coding common_peak1_68_327_0.525043315628711_8.62007366243244_6.04685833450867 chr5 24591456 24592688 + 6.04685833450867 NA promoter-TSS (NR_030423) promoter-TSS (NR_030423) -42 NR_030423 735264 NR_030423 ENSMUSG00000076387 Mir671 Mirn671|mmu-mir-671 microRNA 671 ncRNA common_peak1_270_2906_-0.20184782278883_11.4043914447418_6.04676787107106 chr2 73461895 73464777 + 6.04676787107106 NA intron (NM_153138, intron 1 of 7) intron (NM_153138, intron 1 of 7) -9447 NM_001289722 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak2_79_406_0.475473865737241_8.90662191713487_6.04624595761747 chr19 44253444 44255117 + 6.04624595761747 NA Intergenic RLTR1B|LTR|ERV1 -39396 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_189_1354_0.271004965220333_10.5395796188514_6.04593120056893 chr18 75004516 75006727 + 6.04593120056893 NA promoter-TSS (NM_001001181) promoter-TSS (NM_001001181) -279 NM_001001181 407819 Mm.29866 NM_001001181 ENSMUSG00000036299 BC031181 - cDNA sequence BC031181 protein-coding common_peak1_130_815_0.344661919875378_9.84475630190918_6.04442858509453 chr11 57644746 57646090 + 6.04442858509453 NA promoter-TSS (NM_134189) promoter-TSS (NM_134189) -24 NM_134189 171212 Mm.271670 NM_134189 ENSMUSG00000020520 Galnt10 AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 protein-coding common_peak2_165_1669_-0.269514207006711_10.5708752838581_6.04417290266429 chr8 4237529 4240119 + 6.04417290266429 NA promoter-TSS (NM_001164172) promoter-TSS (NM_001164172) 84 NM_001164172 26400 Mm.3906 NM_011944 ENSMUSG00000002948 Map2k7 5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2 mitogen-activated protein kinase kinase 7 protein-coding common_peak1_289_2379_0.206635354381937_11.3200635353863_6.04278973016717 chr11 98201872 98204186 + 6.04278973016717 NA promoter-TSS (NM_001109628) promoter-TSS (NM_001109628) -276 NM_001109628 69131 Mm.260516 NM_026952 ENSMUSG00000003119 Cdk12 1810022J16Rik|AI646528|Crk7|Crkrs|D11Ertd752e|Pksc cyclin-dependent kinase 12 protein-coding common_peak1_32_305_-0.680067895031772_7.91735389517677_6.04182045094636 chr2 30981282 30982063 + 6.04182045094636 NA promoter-TSS (NM_028846) promoter-TSS (NM_028846) 269 NM_144885 227707 Mm.235238 NM_144885 ENSMUSG00000026851 BC005624 - cDNA sequence BC005624 protein-coding common_peak2_272_2196_0.215160404450055_11.2088993566483_6.04003389136461 chr2 178515460 178521608 + 6.04003389136461 NA Intergenic Intergenic 88019 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak1_41_387_-0.595825887202272_8.30199989858599_6.0388047820103 chr6 134067100 134067802 + 6.0388047820103 NA intron (NM_001303102, intron 2 of 8) MTD|LTR|ERVL-MaLR 31751 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak2_96_925_-0.369530019896827_9.67010337331182_6.03790340296041 chr19 53806349 53808449 + 6.03790340296041 NA intron (NM_001170847, intron 1 of 13) intron (NM_001170847, intron 1 of 13) -84832 NM_011050 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak2_96_925_-0.369530019896827_9.67010337331182_6.03790340296041-2 chr9 118388883 118391505 + 6.03790340296041 NA Intergenic Intergenic -39645 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak1_59_266_0.574572812096505_8.34798233773581_6.03732044537555 chr14 27192896 27193915 + 6.03732044537555 NA intron (NM_001289686, intron 2 of 12) MTB_Mm|LTR|ERVL-MaLR -44605 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_122_747_0.358683321331073_9.72623612055317_6.03651665663946 chr11 76762741 76763829 + 6.03651665663946 NA intron (NM_016810, intron 1 of 8) intron (NM_016810, intron 1 of 8) 270 NM_016810 53334 Mm.20931 NM_016810 ENSMUSG00000010392 Gosr1 AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28 golgi SNAP receptor complex member 1 protein-coding unique_peak2_9_106_-1.27694506995673_6.10299445142278_6.0361799703669-3 chr17 30533718 30534539 + 6.0361799703669 NA intron (NM_172618, intron 1 of 11) intron (NM_172618, intron 1 of 11) 42159 NM_172618 224671 Mm.41220 NM_027060 ENSMUSG00000062202 Btbd9 1700023F20Rik|4930402L05|AI464421 BTB (POZ) domain containing 9 protein-coding unique_peak2_9_106_-1.27694506995673_6.10299445142278_6.0361799703669-2 chr1 171920866 171921958 + 6.0361799703669 NA intron (NM_030710, intron 1 of 7) intron (NM_030710, intron 1 of 7) 3875 NM_030710 30925 Mm.486404 NM_030710 ENSMUSG00000015314 Slamf6 KAL1|KAL1b|Ly108|NTB-A|NTBA|SF2000 SLAM family member 6 protein-coding unique_peak2_9_106_-1.27694506995673_6.10299445142278_6.0361799703669 chr1 30810359 30811092 + 6.0361799703669 NA exon (NM_001081080, exon 12 of 15) exon (NM_001081080, exon 12 of 15) 52531 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik|mKIAA0244 PHD finger protein 3 protein-coding common_peak1_183_1297_0.27622306965344_10.4801862028259_6.0336891766364 chr4 130107054 130108551 + 6.0336891766364 NA intron (NM_026441, intron 1 of 4) intron (NM_026441, intron 1 of 4) 246 NM_026441 67898 Mm.20818 NM_026441 ENSMUSG00000028779 Pef1 2600002E23Rik|Peflin penta-EF hand domain containing 1 protein-coding common_peak1_25_69_1.02613822769597_6.64235213079295_6.02982717790716 chrX 75764372 75764903 + 6.02982717790716 NA promoter-TSS (NR_029443) promoter-TSS (NR_029443) 62 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA common_peak1_63_594_-0.467267972697426_8.98311187184659_6.02917417446415 chr17 35232338 35233636 + 6.02917417446415 NA intron (NM_010909, intron 2 of 3) intron (NM_010909, intron 2 of 3) 2828 NM_010909 18038 Mm.300795 NM_010909 ENSMUSG00000042419 Nfkbil1 Def-7|IKBL nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 protein-coding common_peak1_31_296_-0.691453546489242_7.86859234755615_6.02845988129357-2 chr4 129640345 129640974 + 6.02845988129357 NA 5' UTR (NM_001005506, exon 1 of 10) 5' UTR (NM_001005506, exon 1 of 10) 146 NM_001005506 109658 Mm.268863 NM_001005506 ENSMUSG00000053841 Txlna 2600010N21Rik|AI425952|AW209241|Il14|Txln taxilin alpha protein-coding common_peak1_31_296_-0.691453546489242_7.86859234755615_6.02845988129357 chr19 6084513 6084986 + 6.02845988129357 NA promoter-TSS (NM_026410) promoter-TSS (NM_026410) 142 NM_024231 81909 Mm.289471 NM_024231 ENSMUSG00000024792 Zfpl1 1500015B20Rik zinc finger like protein 1 protein-coding unique_peak2_6_82_-1.54169930370171_5.60418977949607_6.0267867035814-5 chr4 139221836 139222480 + 6.0267867035814 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 28047 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak2_6_82_-1.54169930370171_5.60418977949607_6.0267867035814-4 chr3 52469943 52470586 + 6.0267867035814 NA Intergenic Intergenic 201927 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding unique_peak2_6_82_-1.54169930370171_5.60418977949607_6.0267867035814-2 chr10 62599639 62600313 + 6.0267867035814 NA intron (NM_019553, intron 1 of 14) B1_Mus1|SINE|Alu 2322 NM_019553 56200 Mm.413275 NM_019553 ENSMUSG00000020075 Ddx21 AI255159|AL022742|D10Ertd645e|D10Wsu42e DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 protein-coding unique_peak2_6_82_-1.54169930370171_5.60418977949607_6.0267867035814 chr1 71557160 71557657 + 6.0267867035814 NA intron (NM_026195, intron 1 of 15) intron (NM_026195, intron 1 of 15) 252 NM_026195 108147 Mm.38010 NM_026195 ENSMUSG00000026192 Atic 2610509C24Rik|AA536954|AW212393 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein-coding unique_peak2_6_82_-1.54169930370171_5.60418977949607_6.0267867035814-3 chr17 34124441 34125147 + 6.0267867035814 NA intron (NM_010386, intron 1 of 5) intron (NM_010386, intron 1 of 5) 1962 NM_010386 14998 Mm.16373 NM_010386 ENSMUSG00000037649 H2-DMa H-2Ma|H2-Ma histocompatibility 2, class II, locus DMa protein-coding common_peak1_99_559_0.409956797564128_9.33426141572703_6.024005326978 chr5 3927794 3929016 + 6.024005326978 NA 5' UTR (NM_194462, exon 1 of 48) 5' UTR (NM_194462, exon 1 of 48) 219 NM_194462 100986 Mm.46044 NM_194462 ENSMUSG00000040407 Akap9 5730481H23Rik|AKAP-9|AKAP450|AW545847|C79026|G1-448-15|PRKA9|mKIAA0803|mei2-5|repro12 A kinase (PRKA) anchor protein (yotiao) 9 protein-coding common_peak2_116_697_0.369994739551492_9.6320805959854_6.02384272928493 chr9 41111555 41114177 + 6.02384272928493 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) 44628 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak2_102_987_-0.356819347807939_9.76995755768071_6.02176630705256 chr13 34162271 34163897 + 6.02176630705256 NA exon (NM_001101430, exon 1 of 3) exon (NM_001101430, exon 1 of 3) 120 NM_001110515 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding common_peak2_39_142_0.757875202038743_7.53880893779776_6.02162164315931 chr11 115071232 115072334 + 6.02162164315931 NA Intergenic Intergenic -9745 NM_172050 217306 Mm.222667 NM_172050 ENSMUSG00000048498 Cd300e BC034097|CLM2|Cd300le|TREM5 CD300E molecule protein-coding common_peak2_74_370_0.494874331668864_8.78271254245523_6.02148451850013-3 chrX 150587634 150589015 + 6.02148451850013 NA promoter-TSS (NM_029943) promoter-TSS (NM_029943) -169 NM_029943 77622 Mm.440275 NM_029943 ENSMUSG00000025269 Apex2 C430040P13Rik|ape2 apurinic/apyrimidinic endonuclease 2 protein-coding common_peak2_74_370_0.494874331668864_8.78271254245523_6.02148451850013-2 chr5 135994640 135995569 + 6.02148451850013 NA intron (NM_001256096, intron 1 of 10) CpG 304 NM_001256098 74198 Mm.275574 NM_023742 ENSMUSG00000004947 Dtx2 2610524D08Rik|AA408415|AU022494|Deltex2 deltex 2, E3 ubiquitin ligase protein-coding common_peak2_74_370_0.494874331668864_8.78271254245523_6.02148451850013 chr15 28158431 28159703 + 6.02148451850013 NA Intergenic Intergenic -44699 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding unique_peak1_12_17_1.75888393201226_5.04936696744844_6.0207422466845 chr10 21944815 21945208 + 6.0207422466845 NA intron (NM_001161845, intron 2 of 13) intron (NM_001161845, intron 2 of 13) -33661 NM_001161847 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_169_1165_0.290902085838351_10.3328031161197_6.01982814713847 chr1 87853264 87855066 + 6.01982814713847 NA intron (NM_177646, intron 1 of 29) intron (NM_177646, intron 1 of 29) 878 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak2_183_1873_-0.253607500006607_10.7451014876559_6.01913323027058 chr10 18234263 18236013 + 6.01913323027058 NA promoter-TSS (NM_144820) promoter-TSS (NM_144820) -157 NM_144820 215814 Mm.296565 NM_144820 ENSMUSG00000059554 Ccdc28a 1700009P13Rik|AI480677 coiled-coil domain containing 28A protein-coding common_peak1_51_480_-0.527859527942754_8.64596331979866_6.0182947416795 chr2 10152968 10154100 + 6.0182947416795 NA promoter-TSS (NM_172471) promoter-TSS (NM_172471) -9 NM_172471 209378 Mm.313876 NM_172471 ENSMUSG00000025780 Itih5 4631408O11Rik|5430408M01Rik|E130106B02 inter-alpha (globulin) inhibitor H5 protein-coding common_peak1_68_643_-0.448321557867823_9.10675609918071_6.01827697320712 chrX 57053001 57053759 + 6.01827697320712 NA promoter-TSS (NM_028242) promoter-TSS (NM_028242) -190 NM_028242 72459 Mm.2152 NM_028242 ENSMUSG00000067873 Htatsf1 1600023H17Rik|2600017A12Rik|2700077B20Rik|TAT-SF1 HIV TAT specific factor 1 protein-coding common_peak1_30_287_-0.703242796708006_7.81830360308831_6.01797751498222 chr14 56293220 56293864 + 6.01797751498222 NA Intergenic L1_Rod|LINE|L1 -31282 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak1_57_536_-0.493502652286487_8.82202695184217_6.01759821786102-2 chr11 120572336 120573041 + 6.01759821786102 NA exon (NM_011032, exon 1 of 11) exon (NM_011032, exon 1 of 11) 248 NM_011032 18453 Mm.16660 NM_011032 ENSMUSG00000025130 P4hb ERp59|PDI|Pdia1|Thbp prolyl 4-hydroxylase, beta polypeptide protein-coding common_peak1_57_536_-0.493502652286487_8.82202695184217_6.01759821786102 chr1 36761023 36761818 + 6.01759821786102 NA promoter-TSS (NM_009539) promoter-TSS (NM_009539) -378 NM_009539 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak2_218_1639_0.246973443033468_10.8029668210222_6.01678946371342 chr12 80434075 80437270 + 6.01678946371342 NA intron (NM_177267, intron 1 of 8) CpG 929 NM_177267 320808 Mm.220310 NM_177267 ENSMUSG00000049106 Dcaf5 9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22 DDB1 and CUL4 associated factor 5 protein-coding common_peak1_86_822_-0.391950789755773_9.48877322554374_6.01678528382121 chr4 47474365 47475470 + 6.01678528382121 NA promoter-TSS (NM_019998) promoter-TSS (NM_019998) 256 NM_024171 66212 Mm.20188 NM_024171 ENSMUSG00000053317 Sec61b 1190006C12Rik|AI326121|AW122942 Sec61 beta subunit protein-coding common_peak1_163_1110_0.297024786049047_10.2661554944136_6.01621675427545 chr1 138161673 138164111 + 6.01621675427545 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 12234 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_46_433_-0.558420145018461_8.48234115993525_6.01597653371658 chr7 4336740 4337411 + 6.01597653371658 NA promoter-TSS (NM_010746) promoter-TSS (NM_010746) -649 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak1_77_392_0.481170258535611_8.85897063152641_6.01577564554134 chr8 112011328 112012241 + 6.01577564554134 NA promoter-TSS (NM_053092) promoter-TSS (NM_053092) 425 NM_020584 57321 Mm.213064 NM_020584 ENSMUSG00000033430 Terf2ip Rap1 telomeric repeat binding factor 2, interacting protein protein-coding unique_peak2_10_115_-1.22479556361998_6.24558321331758_6.01488034239266 chr8 122928348 122929159 + 6.01488034239266 NA intron (NR_037865, intron 2 of 13) intron (NR_037865, intron 2 of 13) 80379 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding common_peak1_18_182_-0.915335634887152_7.05803202084047_6.01467690969042-3 chr8 104435768 104436186 + 6.01467690969042 NA intron (NM_001013380, intron 4 of 12) intron (NM_001013380, intron 4 of 12) 7070 NM_001013380 234663 Mm.289583 NM_001013380 ENSMUSG00000035770 Dync1li2 AA409702|C920003I06|Dncli2|Dnclic2|LIC2 dynein, cytoplasmic 1 light intermediate chain 2 protein-coding common_peak1_18_182_-0.915335634887152_7.05803202084047_6.01467690969042-2 chr19 23323392 23323777 + 6.01467690969042 NA intron (NM_174857, intron 11 of 13) intron (NM_174857, intron 11 of 13) -49687 NM_001252684 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding common_peak1_18_182_-0.915335634887152_7.05803202084047_6.01467690969042 chr18 69346245 69346725 + 6.01467690969042 NA intron (NM_001083967, intron 1 of 19) CpG 764 NM_001083967 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding unique_peak2_13_140_-1.07959891356722_6.59975189561518_6.01331436443483 chr10 3236887 3237643 + 6.01331436443483 NA Intergenic Intergenic 30506 NM_001204916 670558 Mm.398582 NM_001204916 ENSMUSG00000091618 H60c 4632413I24Rik|Gm9491 histocompatibility 60c protein-coding unique_peak2_13_140_-1.07959891356722_6.59975189561518_6.01331436443483-2 chr17 6005497 6006360 + 6.01331436443483 NA intron (NM_001113351, intron 6 of 24) intron (NM_001113351, intron 6 of 24) -1652 NM_001290698 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding unique_peak2_13_140_-1.07959891356722_6.59975189561518_6.01331436443483-3 chr5 113821278 113822484 + 6.01331436443483 NA intron (NM_009151, intron 1 of 1) B1_Mus1|SINE|Alu 8620 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak2_109_1059_-0.341945219878291_9.87887593951142_6.01268036549927 chr11 106065387 106067146 + 6.01268036549927 NA exon (NM_027346, exon 1 of 5) exon (NM_027346, exon 1 of 5) 159 NM_027346 70207 Mm.343857 NM_027346 ENSMUSG00000001983 Taco1 2310066I18Rik|Ccdc44 translational activator of mitochondrially encoded cytochrome c oxidase I protein-coding unique_peak2_26_251_-0.755072356660322_7.59974374516976_6.011889815241-2 chr7 48741215 48743089 + 6.011889815241 NA Intergenic MMVL30-int|LTR|ERV1 -46851 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding unique_peak2_26_251_-0.755072356660322_7.59974374516976_6.011889815241 chr11 34035653 34037065 + 6.011889815241 NA Intergenic Intergenic -10842 NM_010696 16822 Mm.265350 NM_010696 ENSMUSG00000002699 Lcp2 AI323664|BB161688|SLP-76|SLP76|m1Khoe|twm lymphocyte cytosolic protein 2 protein-coding common_peak1_26_251_-0.755072356660322_7.59974374516976_6.011889815241-2 chr8 114439669 114440239 + 6.011889815241 NA intron (NM_019573, intron 1 of 8) CpG 302 NM_019573 80707 Mm.440420 NM_019573 ENSMUSG00000004637 Wwox 5330426P09Rik|9030416C10Rik|WOX1 WW domain-containing oxidoreductase protein-coding common_peak1_26_251_-0.755072356660322_7.59974374516976_6.011889815241 chr11 51873886 51874400 + 6.011889815241 NA Intergenic Intergenic -16662 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak2_43_405_-0.578925863304869_8.37587298553274_6.01183465957919 chr11 87126364 87127917 + 6.01183465957919 NA promoter-TSS (NM_197987) promoter-TSS (NM_197987) 65 NM_197987 68729 Mm.17436 NM_197987 ENSMUSG00000018548 Trim37 1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898 tripartite motif-containing 37 protein-coding unique_peak2_43_405_-0.578925863304869_8.37587298553274_6.01183465957919 chr9 116113689 116115939 + 6.01183465957919 NA intron (NM_009371, intron 4 of 7) intron (NM_009371, intron 4 of 7) 60549 NM_029575 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_117_706_0.366572311418782_9.64885256051879_6.01173352509666-2 chr2 28524552 28526409 + 6.01173352509666 NA intron (NM_001145834, intron 1 of 17) intron (NM_001145834, intron 1 of 17) -7984 NM_001145835 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding common_peak1_117_706_0.366572311418782_9.64885256051879_6.01173352509666 chr11 98358340 98359313 + 6.01173352509666 NA promoter-TSS (NR_045477) promoter-TSS (NR_045477) 458 NM_021547 59045 Mm.265546 NM_021547 ENSMUSG00000018167 Stard3 Mln64|es64 START domain containing 3 protein-coding common_peak2_123_1208_-0.319691702142105_10.0797526781781_6.01012711229787 chr15 98984490 98986610 + 6.01012711229787 NA promoter-TSS (NR_045991) promoter-TSS (NR_045991) -415 NR_045991 75951 Mm.441657 NR_045991 ENSMUSG00000097587 4930578M01Rik 3010001K12Rik RIKEN cDNA 4930578M01 gene ncRNA common_peak1_123_1208_-0.319691702142105_10.0797526781781_6.01012711229787 chr14 77903639 77905231 + 6.01012711229787 NA 5' UTR (NM_029495, exon 1 of 12) 5' UTR (NM_029495, exon 1 of 12) 196 NM_029495 108670 Mm.68134 NM_029495 ENSMUSG00000022014 Epsti1 2310046K10Rik|5033415K03Rik|BRESI1 epithelial stromal interaction 1 (breast) protein-coding common_peak2_66_623_-0.454858518712525_9.05797295950599_6.00957967200861 chr6 100833037 100834708 + 6.00957967200861 NA 5' UTR (NM_182939, exon 1 of 9) 5' UTR (NM_182939, exon 1 of 9) 234 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak1_152_1524_-0.28278823405687_10.4331994103092_6.00839181437716 chr11 11461362 11462661 + 6.00839181437716 NA intron (NM_001185153, intron 1 of 7) CpG 408 NM_015785 53604 Mm.9500 NM_015785 ENSMUSG00000020193 Zpbp 4930486K01Rik|Iam38|Sp38 zona pellucida binding protein protein-coding common_peak1_27_260_-0.74134124655196_7.65723537329391_6.00719046686396 chr3 84825163 84825756 + 6.00719046686396 NA intron (NM_001177773, intron 1 of 13) B3A|SINE|B2 9882 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak2_126_782_0.349342196883004_9.78753959573254_6.00677926531699 chr7 90344043 90346954 + 6.00677926531699 NA intron (NM_001289583, intron 1 of 19) intron (NM_001289583, intron 1 of 19) -41483 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_160_1612_-0.273533809796664_10.5187638182573_6.00605485784351 chr15 44427143 44429107 + 6.00605485784351 NA promoter-TSS (NM_175009) promoter-TSS (NM_175009) 14 NM_175009 223527 Mm.291828 NM_175009 ENSMUSG00000022338 Eny2 1810057B09Rik|6720481I12|DC6|Ey2 enhancer of yellow 2 homolog (Drosophila) protein-coding common_peak2_99_955_-0.361626993471653_9.72005331124492_6.00592583887074 chr15 102089790 102092484 + 6.00592583887074 NA intron (NM_145625, intron 9 of 14) B3|SINE|B2 -11851 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak2_339_3770_-0.175864964916459_11.7927989526834_6.00585161353233 chr6 39378475 39382340 + 6.00585161353233 NA Intergenic B3A|SINE|B2 -1021 NM_011226 19331 Mm.123866 NM_011226 ENSMUSG00000029923 Rab19 - RAB19, member RAS oncogene family protein-coding common_peak2_83_792_-0.400477789532768_9.4309381609376_6.00581026953334 chr6 83830691 83832574 + 6.00581026953334 NA intron (NM_146169, intron 1 of 4) CpG 109 NM_146169 232164 Mm.404420 NM_146169 ENSMUSG00000045896 Paip2b - poly(A) binding protein interacting protein 2B protein-coding common_peak1_158_1590_-0.27584183873465_10.4977972009637_6.00571364793141 chr11 68198832 68200954 + 6.00571364793141 NA intron (NM_018768, intron 7 of 7) intron (NM_018768, intron 7 of 7) -20999 NR_105833 102465219 NR_105833 ENSMUSG00000099174 Mir6406 Gm27981|mmu-mir-6406 microRNA 6406 ncRNA common_peak1_15_157_-1.00752748505194_6.80001700565114_6.00566191161288 chr13 97386014 97386420 + 6.00566191161288 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -48753 NR_110432 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 ENSMUSG00000078952|Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA common_peak2_165_1668_-0.268650059007895_10.5704432098587_6.00561462490004 chr13 110561320 110564990 + 6.00561462490004 NA Intergenic Intergenic 168111 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo-like kinase 2 protein-coding common_peak1_24_234_-0.790501754428615_7.48126606935069_6.00529265887197 chr4 59531461 59532046 + 6.00529265887197 NA intron (NM_178164, intron 1 of 13) B2_Mm2|SINE|B2 17611 NM_178164 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding unique_peak2_8_98_-1.3512835693933_5.95371483538296_6.00309679309966-2 chr19 11040953 11041822 + 6.00309679309966 NA Intergenic L1Md_F2|LINE|L1 9179 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA unique_peak2_8_98_-1.3512835693933_5.95371483538296_6.00309679309966 chr18 79086177 79087078 + 6.00309679309966 NA exon (NM_053099, exon 2 of 6) exon (NM_053099, exon 2 of 6) 22764 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_81_421_0.466956387544597_8.95457738247948_6.00202775338613 chr17 26503378 26504635 + 6.00202775338613 NA Intergenic Intergenic 4466 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak2_47_189_0.670532170947504_7.9051216938047_5.99912299610387 chr7 128057856 128059046 + 5.99912299610387 NA Intergenic RLTR26_Mus|LTR|ERVK -4189 NM_001082960 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak1_47_189_0.670532170947504_7.9051216938047_5.99912299610387 chr18 75378383 75379164 + 5.99912299610387 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 11408 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_88_474_0.441234665545878_9.11240103599125_5.99767821169929 chr7 24369973 24371391 + 5.99767821169929 NA intron (NM_008433, intron 1 of 8) intron (NM_008433, intron 1 of 8) 419 NM_008433 16534 Mm.9911 NM_008433 ENSMUSG00000054342 Kcnn4 IK1|IKCA1|KCA4|KCa3.1|SK4|SKCas|mIKCa1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 protein-coding common_peak2_100_965_-0.359031185230316_9.73636378622061_5.99624898947715 chr17 83396510 83398542 + 5.99624898947715 NA intron (NM_199466, intron 1 of 20) intron (NM_199466, intron 1 of 20) 46595 NM_001114362 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding common_peak2_119_723_0.36203516788721_9.68086347102681_5.99605913332769 chr17 12317833 12319407 + 5.99605913332769 NA promoter-TSS (NM_011948) promoter-TSS (NM_011948) 40 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding common_peak1_19_190_-0.886294600404972_7.13428152783326_5.99602428712657-2 chr9 46154750 46155270 + 5.99602428712657 NA intron (NM_027498, intron 3 of 24) intron (NM_027498, intron 3 of 24) -73620 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding common_peak1_19_190_-0.886294600404972_7.13428152783326_5.99602428712657 chr8 107437289 107437863 + 5.99602428712657 NA intron (NM_025830, intron 1 of 23) intron (NM_025830, intron 1 of 23) 1178 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak1_142_921_0.323567406153089_10.0104066435059_5.99433411284067 chr7 101316495 101317948 + 5.99433411284067 NA Intergenic Intergenic -4098 NM_019990 56018 Mm.28896 NM_019990 ENSMUSG00000030688 Stard10 AV048538|CGI-52|NY-C0-28|PC-TP2|PCTP2|Pctpl|Sdccag28|SdccagG28|TISP-81 START domain containing 10 protein-coding common_peak1_42_395_-0.58362944982566_8.33754189516678_5.99359838686237 chr7 67430643 67431791 + 5.99359838686237 NA Intergenic Intergenic -58359 NM_001291195 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak1_92_505_0.42782314619328_9.19690514779095_5.99349282817891 chr2 129800557 129801703 + 5.99349282817891 NA non-coding (NR_029452, exon 1 of 1) non-coding (NR_029452, exon 1 of 1) 329 NR_029452 654409 Mm.305555 NR_029452 4932416H05Rik - RIKEN cDNA 4932416H05 gene ncRNA common_peak1_45_423_-0.562847339283334_8.44649678492153_5.99297908884574 chr2 48948591 48949201 + 5.99297908884574 NA promoter-TSS (NM_029924) promoter-TSS (NM_029924) 371 NM_001177313 26428 Mm.291059 NM_011958 ENSMUSG00000026761 Orc4 Orc4P|Orc4l|mMmORC4 origin recognition complex, subunit 4 protein-coding common_peak1_296_2456_0.202906837605283_11.3641355611648_5.99266054931943 chr2 166226142 166229223 + 5.99266054931943 NA Intergenic Intergenic -46226 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 OTTMUSG00000001131 predicted gene 11468 ncRNA common_peak1_25_243_-0.775316092921955_7.54307929110191_5.9912865605569 chr11 59202458 59203131 + 5.9912865605569 NA promoter-TSS (NR_037964) promoter-TSS (NR_037964) 308 NM_001302336 67212 Mm.282694 NM_026035 ENSMUSG00000036860 Mrpl55 2810038N09Rik|L55mt|MRP-L55 mitochondrial ribosomal protein L55 protein-coding unique_peak2_25_243_-0.775316092921955_7.54307929110191_5.9912865605569 chr10 22148101 22149381 + 5.9912865605569 NA exon (NM_001254745, exon 1 of 2) exon (NM_001254745, exon 1 of 2) 529 NM_001254744 319887 Mm.177746 NM_001254744 ENSMUSG00000097327 E030030I06Rik - RIKEN cDNA E030030I06 gene protein-coding common_peak1_112_1090_-0.335915888151206_9.923477442248_5.98980874622444 chr10 40257166 40258356 + 5.98980874622444 NA promoter-TSS (NM_026113) promoter-TSS (NM_026113) -96 NM_026113 67371 Mm.64104 NM_026113 ENSMUSG00000019837 Gtf3c6 2410016F19Rik|AU019813 general transcription factor IIIC, polypeptide 6, alpha protein-coding common_peak2_186_1906_-0.250171454210731_10.7720034012074_5.98952239860331 chr7 5013839 5016397 + 5.98952239860331 NA promoter-TSS (NM_001110329) promoter-TSS (NM_001110329) -390 NM_001110329 23877 Mm.38911 NM_011813 ENSMUSG00000061374 Fiz1 AI790204|mFLJ00416 Flt3 interacting zinc finger protein 1 protein-coding common_peak1_67_321_0.525844005232265_8.59383888073075_5.98935442629479 chr7 80198060 80199001 + 5.98935442629479 NA 5' UTR (NM_013659, exon 2 of 15) 5' UTR (NM_013659, exon 2 of 15) 11689 NM_013659 20352 Mm.275909 NM_013659 ENSMUSG00000030539 Sema4b SemC|Semac|mKIAA1745 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B protein-coding common_peak2_67_321_0.525844005232265_8.59383888073075_5.98935442629479 chr2 32235618 32237241 + 5.98935442629479 NA promoter-TSS (NM_145145) promoter-TSS (NM_145145) -254 NM_145145 99011 Mm.31192 NM_145145 ENSMUSG00000039254 Pomt1 AI505244 protein-O-mannosyltransferase 1 protein-coding common_peak2_84_802_-0.397614329664822_9.4504490126849_5.98783483098457 chr11 72214404 72216094 + 5.98783483098457 NA 5' UTR (NM_026068, exon 1 of 4) 5' UTR (NM_026068, exon 1 of 4) 111 NM_001163728 75304 Mm.340776 NM_001163728 4930563E22Rik - RIKEN cDNA 4930563E22 gene protein-coding common_peak2_84_802_-0.397614329664822_9.4504490126849_5.98783483098457-2 chr7 38270501 38272100 + 5.98783483098457 NA promoter-TSS (NM_025390) promoter-TSS (NM_025390) 48 NM_025390 66161 Mm.22284 NM_025390 ENSMUSG00000030423 Pop4 1110023P21Rik|Rpp29 processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae) protein-coding common_peak1_300_2500_0.20097393733845_11.3887763108502_5.98682565981602 chr2 144009511 144011407 + 5.98682565981602 NA intron (NM_024281, intron 1 of 23) CpG 804 NM_133626 81910 Mm.13705 NM_024281 ENSMUSG00000027422 Rrbp1 1700087N07Rik|5730465C04Rik|ES/130|mKIAA1398|mRRp0|mRRp1.8|mRRp10|mRRp15a|mRRp15b|mRRp16.8|mRRp2|mRRp41|mRRp47|mRRp5.4|p180 ribosome binding protein 1 protein-coding common_peak2_96_924_-0.367971192040265_9.66932395938354_5.98620739332218 chr18 36017737 36019279 + 5.98620739332218 NA exon (NM_001167891, exon 10 of 10) exon (NM_001167891, exon 10 of 10) 53678 NR_110349 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding common_peak1_58_260_0.57762040847194_8.31671620080586_5.98511257214305 chr10 53379190 53380030 + 5.98511257214305 NA 5' UTR (NM_001204983, exon 1 of 13) 5' UTR (NM_001204983, exon 1 of 13) 241 NM_001204983 100038725 Mm.441403 NM_001204983 ENSMUSG00000038594 Cep85l ENSMUSG00000038594|Gm9766 centrosomal protein 85-like protein-coding common_peak1_44_171_0.699913882862534_7.77622169613336_5.98480443594275 chr17 17601444 17602455 + 5.98480443594275 NA intron (NM_172827, intron 1 of 17) MLT1D|LTR|ERVL-MaLR 22540 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak2_54_507_-0.50739366838625_8.73498785257904_5.98466128163449 chr16 43889132 43890481 + 5.98466128163449 NA promoter-TSS (NM_027801) promoter-TSS (NM_027801) -96 NM_027801 212153 Mm.209835 NM_027801 ENSMUSG00000022701 Ccdc191 2610015P09Rik|8430422M09Rik|AU040712 coiled-coil domain containing 191 protein-coding common_peak2_275_2966_-0.198969268860761_11.4353045770499_5.98398920326294 chr9 58580564 58584235 + 5.98398920326294 NA 5' UTR (NM_001293673, exon 1 of 8) 5' UTR (NM_001293673, exon 1 of 8) 159 NM_009145 20320 Mm.15125 NM_009145 ENSMUSG00000032336 Nptn AW554172|SDR-1|Sdfr1 neuroplastin protein-coding common_peak2_56_526_-0.497160432087041_8.79307893559369_5.98292891891784 chr4 151860511 151861875 + 5.98292891891784 NA intron (NM_001195565, intron 1 of 3) CpG 575 NM_001081557 100072 Mm.318846 NM_001081557 ENSMUSG00000014592 Camta1 1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833 calmodulin binding transcription activator 1 protein-coding common_peak2_120_1175_-0.323105500200915_10.0381195947359_5.98271030391916 chr4 11682424 11685402 + 5.98271030391916 NA Intergenic Intergenic -20534 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding common_peak2_47_441_-0.54751478011298_8.51414516933494_5.98114287827079 chr11 54463589 54465695 + 5.98114287827079 NA intron (NM_173753, intron 1 of 17) intron (NM_173753, intron 1 of 17) 26463 NM_173753 216742 Mm.34087 NM_173753 ENSMUSG00000035992 Fnip1 A730024A03Rik|AI838773|AW557298 folliculin interacting protein 1 protein-coding common_peak2_85_811_-0.392996435744871_9.46883769931274_5.97862922733234 chr7 100705850 100707367 + 5.97862922733234 NA promoter-TSS (NM_178764) promoter-TSS (NM_178764) -94 NM_178764 319604 Mm.260362 NM_178764 ENSMUSG00000029461 Fam168a 2610030B18Rik|B930006L02Rik|mKIAA0280 family with sequence similarity 168, member A protein-coding common_peak1_338_2922_0.186419900519631_11.6064440640659_5.97750928587235 chr11 51999422 52001595 + 5.97750928587235 NA promoter-TSS (NM_009458) promoter-TSS (NM_009458) -42 NM_009458 22210 Mm.384918 NM_009458 ENSMUSG00000020390 Ube2b 2610301N02Rik|E2-14k|HR6B|Rad6b|mHR6B ubiquitin-conjugating enzyme E2B protein-coding common_peak1_174_1213_0.283998595146173_10.3875520038288_5.9769526352438 chr7 104243826 104245463 + 5.9769526352438 NA intron (NM_030684, intron 1 of 7) intron (NM_030684, intron 1 of 7) 187 NM_030684 94094 Mm.326945 NM_030684 ENSMUSG00000056144 Trim34a Trim34|Trim34-1 tripartite motif-containing 34A protein-coding unique_peak1_16_31_1.40353626097417_5.70176813048709_5.97620393694059 chr13 34154678 34155043 + 5.97620393694059 NA Intergenic Intergenic -8104 NM_001101430 69666 Mm.24788 NM_001101430 ENSMUSG00000071451 Psmg4 PAC-4|mPAC4 proteasome (prosome, macropain) assembly chaperone 4 protein-coding unique_peak1_16_31_1.40353626097417_5.70176813048709_5.97620393694059-3 chr15 86093235 86093633 + 5.97620393694059 NA intron (NM_001205353, intron 2 of 18) RMER6A|LTR|ERVK 34707 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_16_31_1.40353626097417_5.70176813048709_5.97620393694059 chr12 17033551 17033944 + 5.97620393694059 NA Intergenic Intergenic -22020 NM_001201333 73667 Mm.159048 NM_001201332 ENSMUSG00000071398 2410004P03Rik - RIKEN cDNA 2410004P03 gene protein-coding unique_peak1_16_31_1.40353626097417_5.70176813048709_5.97620393694059-2 chr15 64061440 64061853 + 5.97620393694059 NA Intergenic Intergenic -1198 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_234_1802_0.235052992871994_10.9337101778683_5.97396301966104 chr11 29692956 29694236 + 5.97396301966104 NA promoter-TSS (NM_194051) promoter-TSS (NM_194051) -178 NM_194051 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding common_peak1_467_4445_0.152010355106867_12.1942974105804_5.97297452627206 chr18 20960787 20964172 + 5.97297452627206 NA intron (NM_026301, intron 1 of 5) intron (NM_026301, intron 1 of 5) 17854 NM_026301 67664 Mm.45980 NM_026301 ENSMUSG00000033107 Rnf125 4930553F04Rik ring finger protein 125 protein-coding common_peak1_12_131_-1.11558518590388_6.48660152640652_5.97261291862871 chr9 20877771 20878064 + 5.97261291862871 NA intron (NM_145154, intron 2 of 5) intron (NM_145154, intron 2 of 5) 1793 NM_145154 70726 Mm.34019 NM_145154 ENSMUSG00000038742 Angptl6 6330404E11Rik|AGF|ARP3|Arp5 angiopoietin-like 6 protein-coding common_peak1_44_413_-0.567308319934693_8.40983279753198_5.97131367849022 chr19 57100149 57101007 + 5.97131367849022 NA intron (NM_001290813, intron 6 of 20) B2_Mm2|SINE|B2 18446 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_134_851_0.335603533492078_9.90251138697188_5.97095569629041 chr5 122284290 122285624 + 5.97095569629041 NA intron (NM_177242, intron 1 of 5) CpG 559 NM_177242 320717 Mm.489670 NM_177242 ENSMUSG00000038582 Pptc7 9130017A15Rik|AA672638|AI848390|TA-PP2C PTC7 protein phosphatase homolog protein-coding common_peak2_115_690_0.369346036497022_9.61721491863677_5.96945030081406 chr2 90579122 90581607 + 5.96945030081406 NA exon (NM_008982, exon 1 of 24) exon (NM_008982, exon 1 of 24) 283 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_65_613_-0.458162586522942_9.03301355210871_5.96934193859167 chr4 15957444 15958816 + 5.96934193859167 NA intron (NM_013752, intron 1 of 15) CpG 163 NM_013752 27354 Mm.20866 NM_013752 ENSMUSG00000028224 Nbn Nbs1 nibrin protein-coding common_peak1_206_2137_-0.235316301320411_10.9443879870603_5.96754266231563 chr10 59898967 59901389 + 5.96754266231563 NA Intergenic Intergenic 20587 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak2_86_459_0.447307779721477_9.06914394080511_5.96718582463844 chr11 118220686 118223578 + 5.96718582463844 NA intron (NM_011180, intron 1 of 12) MT2B2|LTR|ERVL -9390 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_41_154_0.727962549710617_7.64010568012955_5.96637312745389-2 chr4 21754800 21755860 + 5.96637312745389 NA intron (NM_001290420, intron 11 of 11) ORR1B1|LTR|ERVL-MaLR 11881 NM_029840 77032 Mm.87238 NM_029840 ENSMUSG00000028251 Tstd3 2610029I01Rik thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 protein-coding common_peak1_41_154_0.727962549710617_7.64010568012955_5.96637312745389 chr18 67390693 67391269 + 5.96637312745389 NA intron (NM_026473, intron 1 of 3) CpG 250 NM_026473 67951 Mm.181860 NM_026473 ENSMUSG00000001473 Tubb6 2310057H16Rik|BB220206 tubulin, beta 6 class V protein-coding common_peak2_166_1679_-0.267498911978164_10.580496061677_5.96468506437433 chr10 95514236 95516360 + 5.96468506437433 NA intron (NM_080560, intron 1 of 3) CpG 136 NM_080560 93765 Mm.371667 NM_080560 ENSMUSG00000074781 Ube2n 1500026J17Rik|AL022654|BB101821|UBC13 ubiquitin-conjugating enzyme E2N protein-coding common_peak2_49_460_-0.535995437106598_8.58062522187604_5.96066689283719 chr11 72440529 72441878 + 5.96066689283719 NA promoter-TSS (NM_016776) promoter-TSS (NM_016776) -175 NM_016776 18432 Mm.147946 NM_016776 ENSMUSG00000040463 Mybbp1a AL024407|AU019902|P160|p160MBP|p67MBP MYB binding protein (P160) 1a protein-coding common_peak1_68_328_0.520651546511553_8.62226954699102_5.96028102601411 chr5 24038788 24039842 + 5.96028102601411 NA intron (NR_037304, intron 1 of 4) intron (NR_037304, intron 1 of 4) -8625 NM_053090 84652 Mm.304976 NM_053090 ENSMUSG00000028995 Fam126a AB030242|Drctnnb1a family with sequence similarity 126, member A protein-coding common_peak2_37_131_0.782582395224793_7.43568531697085_5.9600542186062-2 chr4 144989889 144990997 + 5.9600542186062 NA intron (NM_001276465, intron 67 of 69) intron (NM_001276465, intron 67 of 69) 97306 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak2_37_131_0.782582395224793_7.43568531697085_5.9600542186062 chr2 71800653 71801505 + 5.9600542186062 NA intron (NM_001277970, intron 1 of 24) intron (NM_001277970, intron 1 of 24) 14140 NM_001277970 16403 Mm.225096 NM_008397 ENSMUSG00000027111 Itga6 5033401O05Rik|AI115430|Cd49f|VLA-6 integrin alpha 6 protein-coding common_peak2_188_1346_0.270209540642764_10.5306389057837_5.95981770073222 chr4 49631167 49632945 + 5.95981770073222 NA promoter-TSS (NM_001163263) promoter-TSS (NM_001163263) -4 NM_001163263 109331 Mm.24765 NM_182999 ENSMUSG00000028309 Rnf20 4833430L21Rik|AW540162|C79397|mKIAA4116 ring finger protein 20 protein-coding common_peak1_16_165_-0.971503170372753_6.88928784616055_5.95898622465929-2 chr13 6636873 6637219 + 5.95898622465929 NA intron (NM_001291071, intron 1 of 21) B4A|SINE|B4 11725 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding common_peak1_16_165_-0.971503170372753_6.88928784616055_5.95898622465929-3 chr7 139157824 139158109 + 5.95898622465929 NA intron (NM_001162540, intron 1 of 11) intron (NM_001162540, intron 1 of 11) 30528 NM_021302 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding common_peak1_16_165_-0.971503170372753_6.88928784616055_5.95898622465929 chr10 63428908 63429307 + 5.95898622465929 NA promoter-TSS (NM_177612) promoter-TSS (NM_177612) -991 NM_177612 216033 Mm.444692 NM_177612 ENSMUSG00000060843 Ctnna3 4930429L08Rik|4933408A16|Catna3|Vr22 catenin (cadherin associated protein), alpha 3 protein-coding unique_peak2_16_165_-0.971503170372753_6.88928784616055_5.95898622465929 chr3 131013846 131015110 + 5.95898622465929 NA Intergenic Intergenic -95819 NM_010703 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_203_2102_-0.237337735231611_10.919564267116_5.95809931350986 chr1 138972339 138977008 + 5.95809931350986 NA intron (NM_181347, intron 1 of 20) AT_rich|Low_complexity|Low_complexity -2984 NR_108103 78229 Mm.437838 NR_108103 ENSMUSG00000104900 4930596I21Rik - RIKEN cDNA 4930596I21 gene ncRNA unique_peak1_11_14_1.88027256129722_4.84702687625713_5.9572528572868 chr14 27241078 27241500 + 5.9572528572868 NA intron (NM_027871, intron 1 of 10) B1_Mus1|SINE|Alu 3279 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_202_2090_-0.23777792281154_10.9110883851838_5.9560818747117 chr11 5176366 5178032 + 5.9560818747117 NA Intergenic Intergenic -24977 NM_080595 140703 Mm.840 NM_080595 ENSMUSG00000034164 Emid1 AW122071|CO-5|Emu1 EMI domain containing 1 protein-coding common_peak1_37_349_-0.624234597249083_8.13909381320779_5.95490063793976 chr10 118869936 118870660 + 5.95490063793976 NA Intergenic Intergenic -1395 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak2_53_227_0.61592986386121_8.14085494609535_5.95490063793966 chr12 77059823 77061043 + 5.95490063793966 NA Intergenic Intergenic -98185 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak1_32_304_-0.675345484789369_7.91499269005556_5.95224693859544 chr10 19584036 19584851 + 5.95224693859544 NA Intergenic Intergenic -7515 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak2_212_2207_-0.231230394777867_10.9929092593892_5.95221941428333 chr11 62549509 62552483 + 5.95221941428333 NA promoter-TSS (NM_011664) promoter-TSS (NM_011664) -175 NM_011664 22187 Mm.371592 NM_011664 ENSMUSG00000019505 Ubb AL033289|Rps27a|Uba52|Ubb2|Ubc ubiquitin B protein-coding common_peak2_71_671_-0.43440743853338_9.17511370351207_5.95076080224125 chr2 173793983 173796086 + 5.95076080224125 NA Intergenic B4A|SINE|B4 57463 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding common_peak1_57_535_-0.490813564758847_8.82068240807835_5.94994125788832 chr17 17293960 17294879 + 5.94994125788832 NA Intergenic Intergenic -79913 NM_025934 67045 Mm.35117 NM_025934 ENSMUSG00000023852 Riok2 2010110K24Rik|2410085M17Rik RIO kinase 2 (yeast) protein-coding common_peak1_20_47_1.19251214307734_6.18121857225983_5.94828857704283 chr7 99961438 99961987 + 5.94828857704283 NA intron (NM_175388, intron 1 of 5) MER68|LTR|ERVL 18746 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding common_peak1_105_1016_-0.347749887228032_9.81622902024348_5.94827376231759 chr8 75033674 75034877 + 5.94827376231759 NA intron (NM_011622, intron 1 of 14) CpG 589 NM_011622 21968 Mm.1967 NM_011622 ENSMUSG00000042870 Tom1 - target of myb1 trafficking protein protein-coding common_peak2_279_2274_0.209631818109182_11.256466739028_5.9482644139622 chr12 70973998 70975964 + 5.9482644139622 NA intron (NM_001310596, intron 1 of 10) CpG 358 NM_011184 19167 Mm.296338 NM_011184 ENSMUSG00000060073 Psma3 Lmpc8 proteasome (prosome, macropain) subunit, alpha type 3 protein-coding unique_peak2_11_122_-1.1553513484335_6.36483883112249_5.94791834665155 chr17 35199881 35200548 + 5.94791834665155 NA exon (NM_001278601, exon 3 of 3) exon (NM_001278601, exon 3 of 3) 1793 NM_013693 21926 Mm.1293 NM_013693 ENSMUSG00000024401 Tnf DIF|TNF-a|TNF-alpha|TNFSF2|TNFalpha|Tnfa|Tnfsf1a|Tnlg1f tumor necrosis factor protein-coding unique_peak2_11_122_-1.1553513484335_6.36483883112249_5.94791834665155-2 chr5 124002521 124003678 + 5.94791834665155 NA 3' UTR (NM_145070, exon 32 of 32) 3' UTR (NM_145070, exon 32 of 32) 6247 NR_105999 102465625 NR_105999 ENSMUSG00000098454 Mir7032 Gm27309|mmu-mir-7032 microRNA 7032 ncRNA common_peak1_111_1079_-0.337026224660194_9.90830248472074_5.94739602458681 chr5 105514816 105516656 + 5.94739602458681 NA Intergenic Intergenic -3735 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak2_111_1079_-0.337026224660194_9.90830248472074_5.94739602458681 chr17 83513487 83515059 + 5.94739602458681 NA promoter-TSS (NM_001159529) promoter-TSS (NM_001159529) 60 NM_009187 20463 Mm.30072 NM_009187 ENSMUSG00000024248 Cox7a2l COX7AR|COX7RP|EB1|SIG-81|SIG81|Silg81 cytochrome c oxidase subunit VIIa polypeptide 2-like protein-coding common_peak1_20_199_-0.866381545976227_7.21066541678661_5.94708608649659 chr3 105763922 105764467 + 5.94708608649659 NA intron (NM_145541, intron 1 of 7) L1MCa|LINE|L1 37187 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein-1a protein-coding common_peak1_66_314_0.531335681762444_8.5648758592685_5.94683632794052-2 chr17 84177294 84178442 + 5.94683632794052 NA Intergenic ID_B1|SINE|B4 10079 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_66_314_0.531335681762444_8.5648758592685_5.94683632794052 chr12 25388872 25390100 + 5.94683632794052 NA Intergenic Intergenic 260312 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_66_314_0.531335681762444_8.5648758592685_5.94683632794052 chr5 104507796 104509097 + 5.94683632794052 NA promoter-TSS (NM_001166581) promoter-TSS (NM_001166581) 94 NM_001166581 100042165 Mm.482189 NM_001166581 ENSMUSG00000079065 BC005561 - cDNA sequence BC005561 protein-coding common_peak1_51_479_-0.52485703978123_8.6444620757179_5.94683374314145 chr17 36257379 36258084 + 5.94683374314145 NA intron (NM_026308, intron 1 of 4) CpG-6355 115 NM_026308 67676 Mm.27131 NM_026308 ENSMUSG00000024446 Rpp21 0610037N01Rik ribonuclease P 21 subunit protein-coding common_peak1_87_831_-0.387417353074429_9.50673104160388_5.94623294361607 chr15 58140862 58142025 + 5.94623294361607 NA promoter-TSS (NM_029734) promoter-TSS (NM_029734) 7 NM_029734 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding common_peak2_100_964_-0.357536938549986_9.73561666288045_5.94581352088219 chr8 77548858 77550805 + 5.94581352088219 NA intron (NM_001081240, intron 1 of 11) intron (NM_001081240, intron 1 of 11) 434 NM_001081240 102182 Mm.197630 NM_178903 ENSMUSG00000037134 Prmt9 AI931714|Prmt10 protein arginine methyltransferase 9 protein-coding common_peak2_21_207_-0.840641975447141_7.28011873041752_5.94429214208813 chr5 114667003 114667754 + 5.94429214208813 NA Intergenic B3|SINE|B2 -8957 NM_022017 63873 Mm.266450 NM_022017 ENSMUSG00000014158 Trpv4 0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding common_peak1_21_207_-0.840641975447141_7.28011873041752_5.94429214208813 chr14 103033048 103033584 + 5.94429214208813 NA intron (NR_045657, intron 1 of 2) intron (NR_045657, intron 1 of 2) 487 NR_045657 71264 Mm.399572 NR_045657 4933432I03Rik - RIKEN cDNA 4933432I03 gene ncRNA common_peak2_393_3557_0.168868132544494_11.8812848615394_5.94339730631097 chr17 12990680 12993481 + 5.94339730631097 NA 5' UTR (NM_001113533, exon 1 of 8) 5' UTR (NM_001113533, exon 1 of 8) 179 NM_001113533 60532 Mm.275521 NM_175394 ENSMUSG00000060475 Wtap 2810408K05Rik|9430038B09Rik Wilms tumour 1-associating protein protein-coding common_peak1_59_555_-0.483672328939447_8.87710490825378_5.94314987352591 chr13 73737067 73737958 + 5.94314987352591 NA Intergenic Intergenic -26185 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding unique_peak1_21_51_1.15935802455286_6.28011873041752_5.94259432121969 chr7 16003727 16004255 + 5.94259432121969 NA Intergenic Intergenic -4496 NM_001081418 243842 Mm.440249 NM_001081418 ENSMUSG00000070808 Gltscr1 - glioma tumor suppressor candidate region gene 1 protein-coding common_peak1_21_51_1.15935802455286_6.28011873041752_5.94259432121969-2 chr12 108638365 108638860 + 5.94259432121969 NA intron (NM_001163396, intron 2 of 14) intron (NM_001163396, intron 2 of 14) 2859 NM_001163396 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774 Ena-vasodilator stimulated phosphoprotein protein-coding common_peak1_21_51_1.15935802455286_6.28011873041752_5.94259432121969 chr1 74200518 74201092 + 5.94259432121969 NA Intergenic Intergenic 5815 NR_035449 100316687 NR_035449 ENSMUSG00000087820 Mir1928 mmu-mir-1928 microRNA 1928 ncRNA common_peak1_21_51_1.15935802455286_6.28011873041752_5.94259432121969-3 chr4 141077013 141077416 + 5.94259432121969 NA intron (NM_025383, intron 1 of 7) B4A|SINE|B4 1131 NM_025383 66147 Mm.21187 NM_025383 ENSMUSG00000028923 Necap2 1110005F07Rik|AA409105|C78898 NECAP endocytosis associated 2 protein-coding common_peak1_40_148_0.742274744603264_7.59030589276379_5.94247839459968 chr11 59471645 59472507 + 5.94247839459968 NA intron (NM_178417, intron 1 of 3) intron (NM_178417, intron 1 of 3) 398 NM_178417 237775 Mm.339604 NM_178417 ENSMUSG00000054519 Zfp867 - zinc finger protein 867 protein-coding common_peak1_40_148_0.742274744603264_7.59030589276379_5.94247839459968-2 chr4 59326395 59327188 + 5.94247839459968 NA intron (NM_001163288, intron 14 of 16) intron (NM_001163288, intron 14 of 16) 66740 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_91_872_-0.378152417163218_9.58076163504783_5.9424446306565 chr11 104361141 104361826 + 5.9424446306565 NA intron (NM_001081045, intron 4 of 13) CT-rich|Low_complexity|Low_complexity 80808 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak1_59_267_0.569179553326288_8.35067896712092_5.94155245531631 chr9 57910967 57911530 + 5.94155245531631 NA intron (NM_001122873, intron 1 of 10) MIRb|SINE|MIR 262 NM_001122873 69459 Mm.41735 NM_027086 ENSMUSG00000055720 Ubl7 2300004C15Rik ubiquitin-like 7 (bone marrow stromal cell-derived) protein-coding common_peak2_59_267_0.569179553326288_8.35067896712092_5.94155245531631 chr13 44534947 44536463 + 5.94155245531631 NA Intergenic Intergenic 95978 NR_045489 69491 Mm.392410 NR_045489 ENSMUSG00000098144 1700029N11Rik - RIKEN cDNA 1700029N11 gene ncRNA common_peak1_197_2032_-0.241327724844211_10.8687306374226_5.94133108648658 chr2 23155976 23157219 + 5.94133108648658 NA promoter-TSS (NM_013771) promoter-TSS (NM_013771) 92 NM_013771 27377 Mm.23335 NM_013771 ENSMUSG00000026775 Yme1l1 FtsH1|Ftsh YME1-like 1 (S. cerevisiae) protein-coding common_peak1_46_432_-0.555092127300707_8.48067715107637_5.9407934864581 chr13 55634941 55635561 + 5.9407934864581 NA intron (NM_001282055, intron 1 of 22) CpG 252 NM_001282055 212880 Mm.202725 NM_145975 ENSMUSG00000021500 Ddx46 2200005K02Rik|8430438J23Rik|AI325430|AI957095|mKIAA0801 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 protein-coding common_peak2_143_931_0.320336150777456_10.024354220043_5.93975579233075 chr16 11460546 11463044 + 5.93975579233075 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 56147 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak1_46_184_0.671749626909706_7.86725627397117_5.9376611404482 chr17 12118397 12119227 + 5.9376611404482 NA promoter-TSS (NM_026644) promoter-TSS (NM_026644) -472 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein-coding common_peak1_120_1174_-0.321878196816915_10.0375059430439_5.937034985695 chr14 8080168 8080998 + 5.937034985695 NA intron (NM_025938, intron 1 of 5) CpG 270 NM_025938 67053 Mm.210048 NM_025938 ENSMUSG00000023156 Rpp14 2610511E03Rik|AA682089 ribonuclease P 14 subunit protein-coding common_peak2_147_966_0.315636194107283_10.0751901765305_5.93557607925302 chr2 173658948 173661082 + 5.93557607925302 NA promoter-TSS (NR_027957) promoter-TSS (NR_027957) 170 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak1_101_576_0.401855579668331_9.37335529847965_5.93392303486261 chr4 14825704 14827175 + 5.93392303486261 NA exon (NM_152812, exon 1 of 7) exon (NM_152812, exon 1 of 7) 148 NM_152812 72201 Mm.387724 NM_152812 ENSMUSG00000040550 Otud6b 2600013N14Rik|AU015433 OTU domain containing 6B protein-coding common_peak2_101_576_0.401855579668331_9.37335529847965_5.93392303486261 chr4 24495835 24497301 + 5.93392303486261 NA 5' UTR (NM_199467, exon 1 of 24) 5' UTR (NM_199467, exon 1 of 24) 106 NM_199467 212377 Mm.120919 NM_199467 ENSMUSG00000045751 Mms22l F730047E07Rik|Gm134 MMS22-like, DNA repair protein protein-coding common_peak2_48_450_-0.540107386344696_8.54692993008303_5.93325285441731 chr6 34910090 34911541 + 5.93325285441731 NA promoter-TSS (NM_001013366) promoter-TSS (NM_001013366) 16 NM_001013366 101240 Mm.152120 NM_001013366 ENSMUSG00000058486 Wdr91 9530020G05Rik|AI987683|AU018665 WD repeat domain 91 protein-coding common_peak2_69_335_0.51574060293113_8.65018772424433_5.9328296363528 chr16 76365796 76367674 + 5.9328296363528 NA intron (NM_173440, intron 1 of 3) intron (NM_173440, intron 1 of 3) 6314 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding unique_peak2_5_73_-1.64890251990957_5.38500210567417_5.93171994111622 chr7 25756261 25756834 + 5.93171994111622 NA TTS (NM_001190974) TTS (NM_001190974) -1827 NM_144922 232989 Mm.254223 NM_144922 ENSMUSG00000040725 Hnrnpul1 E130317O14Rik|E1B-AP5|E1BAP5|Hnrnpul|Hnrpul1 heterogeneous nuclear ribonucleoprotein U-like 1 protein-coding unique_peak1_14_24_1.53818793163662_5.41295015559304_5.93171994111622 chr1 86253936 86254330 + 5.93171994111622 NA intron (NM_001310702, intron 21 of 24) intron (NM_001310702, intron 21 of 24) -49088 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak1_14_24_1.53818793163662_5.41295015559304_5.93171994111622 chr1 152018343 152018753 + 5.93171994111622 NA intron (NM_197990, intron 1 of 5) intron (NM_197990, intron 1 of 5) 71772 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding unique_peak1_14_24_1.53818793163662_5.41295015559304_5.93171994111622-2 chr9 65569183 65569577 + 5.93171994111622 NA intron (NM_153119, intron 2 of 5) intron (NM_153119, intron 2 of 5) 10707 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak2_31_99_0.8790093845368_7.08336088204312_5.9313212141087 chr1 182539081 182539595 + 5.9313212141087 NA Intergenic Intergenic -21855 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_43_166_0.702705761406255_7.73505717317718_5.92719220764326 chr19 40664255 40665069 + 5.92719220764326 NA intron (NM_009848, intron 1 of 9) B3A|SINE|B2 4892 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak1_48_196_0.654824417454308_7.94946402818353_5.92636135519401 chr8 20557527 20558314 + 5.92636135519401 NA Intergenic CpG -57007 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding common_peak2_88_475_0.438200605456245_9.11391806603607_5.92592026027927 chr11 49099905 49102323 + 5.92592026027927 NA intron (NM_010999, intron 2 of 5) RMER17C-int|LTR|ERVK 12643 NM_146337 258334 Mm.390388 NM_146337 ENSMUSG00000047511 Olfr1396 MOR276-2 olfactory receptor 1396 protein-coding common_peak2_88_475_0.438200605456245_9.11391806603607_5.92592026027927-2 chr9 80080227 80082314 + 5.92592026027927 NA intron (NM_001311110, intron 1 of 23) ORR1E|LTR|ERVL-MaLR 14367 NM_146003 215351 Mm.28232 NM_146003 ENSMUSG00000034252 Senp6 2810017C20Rik|E130319N12Rik|Susp1|mKIAA0797 SUMO/sentrin specific peptidase 6 protein-coding common_peak2_81_422_0.463541723131833_8.95628471468587_5.92590530300636 chr4 21766476 21767459 + 5.92590530300636 NA intron (NM_029840, intron 1 of 3) intron (NM_029840, intron 1 of 3) 244 NM_029840 77032 Mm.87238 NM_029840 ENSMUSG00000028251 Tstd3 2610029I01Rik thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 protein-coding unique_peak2_30_286_-0.698224721941381_7.815794565705_5.92587276772106 chr8 121514427 121516221 + 5.92587276772106 NA Intergenic Intergenic 26630 NM_029597 76405 Mm.165697 NM_029597 ENSMUSG00000031809 1700018B08Rik 1700084O22Rik RIKEN cDNA 1700018B08 gene protein-coding common_peak2_246_1927_0.226479782241762_11.0261292273508_5.92582748068199 chr9 15043743 15046917 + 5.92582748068199 NA 5' UTR (NM_019482, exon 1 of 5) 5' UTR (NM_019482, exon 1 of 5) 148 NM_019482 55991 Mm.142253 NM_019482 ENSMUSG00000031934 Panx1 AI847747 pannexin 1 protein-coding common_peak2_161_1622_-0.271492890368737_10.5287008393636_5.92481814128412 chr7 113512743 113515099 + 5.92481814128412 NA promoter-TSS (NM_027379) promoter-TSS (NM_027379) 87 NM_027379 67420 Mm.206919 NM_026143 ENSMUSG00000030759 Far1 2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2 fatty acyl CoA reductase 1 protein-coding unique_peak2_17_173_-0.938258133976061_6.9738144288607_5.9242546998207 chr13 43260776 43262059 + 5.9242546998207 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) 42755 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak2_97_933_-0.363790191612621_9.68538364390335_5.9241986315473 chr4 149165979 149168036 + 5.9241986315473 NA promoter-TSS (NM_001081274) promoter-TSS (NM_001081274) -300 NM_001081274 110208 Mm.252080 NM_025801 ENSMUSG00000028961 Pgd 0610042A05Rik|AU019875|C78335 phosphogluconate dehydrogenase protein-coding common_peak1_134_1324_-0.301463490620009_10.2210448990279_5.92321606649841 chr4 123570834 123572250 + 5.92321606649841 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -44878 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak2_132_835_0.336541180581477_9.87562972237162_5.92237539595978 chr17 83311717 83313407 + 5.92237539595978 NA Intergenic Intergenic -38369 NM_001114361 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding common_peak2_326_2789_0.189827344966371_11.5409630791997_5.92193620511494 chr9 96362461 96365491 + 5.92193620511494 NA intron (NM_007502, intron 1 of 6) CpG 323 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak1_122_749_0.354830995835467_9.72816228330098_5.92191259241028 chr18 60560308 60561433 + 5.92191259241028 NA promoter-TSS (NM_025776) promoter-TSS (NM_025776) 84 NM_025776 66810 Mm.275106 NM_025776 ENSMUSG00000024604 Rbm22 8430430L24Rik RNA binding motif protein 22 protein-coding common_peak1_222_2324_-0.224531126928353_11.0707494374186_5.92187759991464 chr18 32067278 32068707 + 5.92187759991464 NA 5' UTR (NM_173441, exon 1 of 14) 5' UTR (NM_173441, exon 1 of 14) 258 NM_173441 73473 Mm.66853 NM_173441 ENSMUSG00000024384 Iws1 1700069O15Rik|3000008H23|AL117927|AW214353 IWS1, SUPT6 interacting protein protein-coding common_peak1_23_224_-0.800005723124943_7.41377832965457_5.92177619860346 chr1 88066556 88066996 + 5.92177619860346 NA intron (NM_201641, intron 1 of 4) intron (NM_201641, intron 1 of 4) -4003 NM_201644 394434 Mm.300095 NM_201644 ENSMUSG00000090175 Ugt1a9 UDPGT|UDPGT 1-9|UGT1-09|UGT1.9|UGTP4|Ugt1a12|mUGTBr/P UDP glucuronosyltransferase 1 family, polypeptide A9 protein-coding common_peak1_23_224_-0.800005723124943_7.41377832965457_5.92177619860346-2 chr9 107985673 107986147 + 5.92177619860346 NA promoter-TSS (NM_026597) promoter-TSS (NM_026597) 6 NM_026597 68176 Mm.76166 NM_026597 ENSMUSG00000042106 Fam212a 6230427J02Rik|Inka1 family with sequence similarity 212, member A protein-coding common_peak2_52_487_-0.514995572119775_8.673239551503_5.9205948955285 chr15 31452596 31454347 + 5.9205948955285 NA exon (NM_145852, exon 1 of 5) exon (NM_145852, exon 1 of 5) 218 NM_145852 252967 Mm.436668 NM_145852 ENSMUSG00000022236 Ropn1l ASP|AV047578|Akapasp ropporin 1-like protein-coding common_peak1_135_1335_-0.300331097940811_10.2335387435036_5.91918947038288 chr14 56284630 56286280 + 5.91918947038288 NA Intergenic Intergenic -23195 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak2_213_1592_0.24805217901682_10.7615566410337_5.91741185952688 chr9 96436812 96439276 + 5.91741185952688 NA Intergenic Intergenic 40631 NM_011279 19823 Mm.28235 NM_011279 ENSMUSG00000051234 Rnf7 Rbx2|SAG ring finger protein 7 protein-coding common_peak2_29_277_-0.710284640125804_7.76379875266061_5.91718788264677 chr11 59212503 59213626 + 5.91718788264677 NA intron (NM_007476, intron 3 of 4) intron (NM_007476, intron 3 of 4) 4703 NM_024210 67862 Mm.358708 NM_024210 ENSMUSG00000020441 2310033P09Rik Mmtag2 RIKEN cDNA 2310033P09 gene protein-coding common_peak2_29_277_-0.710284640125804_7.76379875266061_5.91718788264677-2 chr5 30869191 30870236 + 5.91718788264677 NA promoter-TSS (NM_144525) promoter-TSS (NM_144525) 66 NM_144525 68796 Mm.205169 NM_144525 ENSMUSG00000038828 Tmem214 1110039B18Rik|4921530J21Rik|AI841294|AU018742|C76280 transmembrane protein 214 protein-coding common_peak1_29_277_-0.710284640125804_7.76379875266061_5.91718788264677 chr8 124343554 124344259 + 5.91718788264677 NA 3' UTR (NM_139272, exon 16 of 16) 3' UTR (NM_139272, exon 16 of 16) 90030 NM_171824 209966 Mm.234233 NM_171824 ENSMUSG00000050751 Pgbd5 2900019M05Rik|AI854313 piggyBac transposable element derived 5 protein-coding common_peak2_62_287_0.55168415850947_8.44576708069705_5.91707484511457 chr7 58721478 58723305 + 5.91707484511457 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 64189 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_36_126_0.791098964439245_7.38423416899179_5.91675677879904 chr19 16204838 16205558 + 5.91675677879904 NA intron (NM_008139, intron 1 of 6) intron (NM_008139, intron 1 of 6) 41100 NR_033228 595139 Mm.405662 NR_033228 E030024N20Rik 9030417F11Rik|Ppia-ps8 peptidylprolyl isomerase A pseudogene 8 pseudo common_peak1_85_452_0.44897224139407_9.04785336074327_5.91593337258253 chr14 32513196 32514052 + 5.91593337258253 NA intron (NM_001081221, intron 1 of 20) CpG 103 NM_001081221 319955 Mm.318310 NM_177043 ENSMUSG00000054051 Ercc6 4732403I04|C130058G22Rik|CSB excision repair cross-complementing rodent repair deficiency, complementation group 6 protein-coding common_peak2_136_1346_-0.299196578927443_10.2459358459986_5.91541096114636 chr5 77091351 77095593 + 5.91541096114636 NA intron (NM_175606, intron 2 of 2) intron (NM_175606, intron 2 of 2) 1795 NM_001159901 74318 Mm.181852 NM_175606 ENSMUSG00000059325 Hopx 1110018K11Rik|1200015P04Rik|2300002F06Rik|AI848177|AW490897|Cameo|Hdop|Hod|Hop|Ob1|Obl|Toto HOP homeobox protein-coding common_peak2_42_394_-0.579981672810515_8.33571800665921_5.91507723749258 chr13 48515133 48517391 + 5.91507723749258 NA Intergenic Intergenic -2826 NM_001164576 67911 Mm.251375 NM_026450 ENSMUSG00000050954 Zfp169 1700025J14Rik|4930429A13Rik|BE688704 zinc finger protein 169 protein-coding common_peak1_60_564_-0.477587606255577_8.90331325417476_5.91452783041415 chr19 8888866 8889622 + 5.91452783041415 NA promoter-TSS (NR_027866) promoter-TSS (NR_027866) 361 NR_104416 66276 Mm.27503 NM_025463 ENSMUSG00000071653 1810009A15Rik - RIKEN cDNA 1810009A15 gene protein-coding common_peak1_289_2383_0.204212692115082_11.3212748665197_5.91415506815966 chr9 45267123 45269771 + 5.91415506815966 NA intron (NM_008348, intron 1 of 6) intron (NM_008348, intron 1 of 6) 699 NM_008348 16154 Mm.379327 NM_008348 ENSMUSG00000032089 Il10ra AW553859|CDw210|CDw210a|IL-10R1|IL-10RA|Il10r|mIL-10R interleukin 10 receptor, alpha protein-coding common_peak2_26_250_-0.749335987111177_7.59687556039518_5.9135690480181 chr3 103852634 103853585 + 5.9135690480181 NA intron (NM_001142960, intron 3 of 3) intron (NM_001142960, intron 3 of 3) -6686 NR_104070 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding unique_peak2_26_250_-0.749335987111177_7.59687556039518_5.9135690480181 chr16 49503205 49504721 + 5.9135690480181 NA Intergenic Intergenic -195331 NM_028680 73916 Mm.241276 NM_028680 ENSMUSG00000032965 Ift57 4833420A15Rik|Esrrbl1|Hippi|MHS4R2 intraflagellar transport 57 protein-coding common_peak1_26_250_-0.749335987111177_7.59687556039518_5.9135690480181 chr12 57229828 57230369 + 5.9135690480181 NA promoter-TSS (NM_001164370) promoter-TSS (NM_001164370) -314 NM_001037746 328099 Mm.268180 NM_001037746 ENSMUSG00000079104 Prps1l3 AU021838|AW536152|Gm5081 phosphoribosyl pyrophosphate synthetase 1-like 3 protein-coding common_peak2_186_1328_0.27079228482585_10.5115215316891_5.9120634199269 chrX 12086883 12089729 + 5.9120634199269 NA intron (NM_001168321, intron 1 of 13) CpG -7753 NM_029510 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding unique_peak2_28_268_-0.722799048044055_7.7100628385346_5.91195900512528 chr6 83124565 83125567 + 5.91195900512528 NA promoter-TSS (NM_023547) promoter-TSS (NM_023547) -37 NM_023547 70020 Mm.27814 NM_023547 ENSMUSG00000030034 Ino80b 2510009I23Rik|HMG1YL4|Hmga1l4|Papa1|Znhit4 INO80 complex subunit B protein-coding common_peak1_30_94_0.896826596403359_7.01826890653263_5.9107673780504 chr1 38777629 38778219 + 5.9107673780504 NA Intergenic L1MC3|LINE|L1 43291 NM_001029878 381338 Mm.487137 NM_028403 ENSMUSG00000048814 Lonrf2 2900060P06Rik|AI851349 LON peptidase N-terminal domain and ring finger 2 protein-coding common_peak1_30_94_0.896826596403359_7.01826890653263_5.9107673780504-2 chr11 87595417 87596179 + 5.9107673780504 NA intron (NM_133215, intron 2 of 18) CpG 3581 NM_133215 170749 Mm.399376 NM_133215 ENSMUSG00000018401 Mtmr4 AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647 myotubularin related protein 4 protein-coding common_peak1_30_94_0.896826596403359_7.01826890653263_5.9107673780504-3 chr7 75808543 75809138 + 5.9107673780504 NA Intergenic Intergenic -39498 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_30_94_0.896826596403359_7.01826890653263_5.9107673780504-2 chr4 133174019 133174743 + 5.9107673780504 NA intron (NM_153423, intron 1 of 8) intron (NM_153423, intron 1 of 8) -21274 NR_105984 102466215 NR_105984 ENSMUSG00000099202 Mir7017 Gm27945|mmu-mir-7017 microRNA 7017 ncRNA common_peak2_30_94_0.896826596403359_7.01826890653263_5.9107673780504-4 chrX 136976423 136976956 + 5.9107673780504 NA intron (NM_001081983, intron 1 of 2) intron (NM_001081983, intron 1 of 2) 185 NM_001081983 666244 Mm.381904 NM_001081983 ENSMUSG00000089768 Tmsb15b1 Tm15b thymosin beta 15b1 protein-coding common_peak2_30_94_0.896826596403359_7.01826890653263_5.9107673780504 chr19 43689655 43690332 + 5.9107673780504 NA intron (NM_053103, intron 1 of 12) CpG 304 NM_053103 93685 Mm.248237 NM_053103 ENSMUSG00000025192 Entpd7 1810012B13Rik|1810020C02Rik|2810003F23Rik|LALP1|Lysal2 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding common_peak2_30_94_0.896826596403359_7.01826890653263_5.9107673780504-3 chr7 75808567 75809145 + 5.9107673780504 NA Intergenic Intergenic -39482 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_35_120_0.812434435784429_7.32508045516681_5.91009680897598 chr5 90931013 90931555 + 5.91009680897598 NA promoter-TSS (NM_026788) promoter-TSS (NM_026788) 88 NM_026788 665563 Mm.153030 NM_026788 ENSMUSG00000029376 Mthfd2l 1110019K23Rik|C630010D07Rik methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like protein-coding common_peak1_79_750_-0.408310247510784_9.34851397375888_5.90580159603498 chr5 31918154 31919568 + 5.90580159603498 NA intron (NM_181279, intron 9 of 13) intron (NM_181279, intron 9 of 13) -217611 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_94_902_-0.370112387205646_9.63352598387803_5.90537335996167 chr13 37993367 37994230 + 5.90537335996167 NA intron (NM_025965, intron 1 of 7) CpG 392 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding common_peak2_94_902_-0.370112387205646_9.63352598387803_5.90537335996167 chr9 66511025 66513462 + 5.90537335996167 NA intron (NM_175206, intron 1 of 1) intron (NM_175206, intron 1 of 1) 2350 NM_175206 74165 Mm.297998 NM_175206 ENSMUSG00000050503 Fbxl22 1110004B15Rik F-box and leucine-rich repeat protein 22 protein-coding common_peak1_117_1142_-0.326470971986296_9.99537420222133_5.90532206739585 chr19 26605168 26606714 + 5.90532206739585 NA intron (NM_011416, intron 1 of 32) CpG 781 NM_011416 67155 Mm.342988 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding common_peak2_103_593_0.394326746212878_9.4114824939072_5.90436389902094 chr14 78848213 78849928 + 5.90436389902094 NA promoter-TSS (NM_027906) promoter-TSS (NM_027906) -108 NM_027906 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding unique_peak2_24_233_-0.784349527447021_7.47818995585989_5.90359042039179 chr19 7306452 7308155 + 5.90359042039179 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) -11856 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding unique_peak2_38_357_-0.610872327656396_8.17837961343606_5.9006200182813 chr7 141391500 141393025 + 5.9006200182813 NA exon (NM_011528, exon 1 of 8) exon (NM_011528, exon 1 of 8) 102 NM_011528 21351 Mm.29182 NM_011528 ENSMUSG00000025503 Taldo1 - transaldolase 1 protein-coding common_peak2_38_357_-0.610872327656396_8.17837961343606_5.9006200182813 chr6 30390498 30391747 + 5.9006200182813 NA promoter-TSS (NM_172735) promoter-TSS (NM_172735) -102 NM_001311086 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding common_peak1_18_181_-0.907430436801806_7.05407942179779_5.89959580017373 chr11 59212520 59212984 + 5.89959580017373 NA intron (NM_007476, intron 4 of 4) intron (NM_007476, intron 4 of 4) 4391 NM_024210 67862 Mm.358708 NM_024210 ENSMUSG00000020441 2310033P09Rik Mmtag2 RIKEN cDNA 2310033P09 gene protein-coding unique_peak2_18_181_-0.907430436801806_7.05407942179779_5.89959580017373 chr11 69036941 69038011 + 5.89959580017373 NA Intergenic Intergenic -8161 NM_011496 20877 Mm.3488 NM_011496 ENSMUSG00000020897 Aurkb AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5 aurora kinase B protein-coding common_peak1_23_60_1.08303813052921_6.47225640282749_5.89956583903499 chr19 18582958 18583489 + 5.89956583903499 NA intron (NM_017375, intron 9 of 9) intron (NM_017375, intron 9 of 9) 48590 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak2_23_60_1.08303813052921_6.47225640282749_5.89956583903499 chr4 119232908 119233387 + 5.89956583903499 NA promoter-TSS (NM_001012400) promoter-TSS (NM_001012400) 232 NM_019782 56401 Mm.27961 NM_019782 ENSMUSG00000028641 P3h1 2410024C15Rik|Gros1|Lepre1 prolyl 3-hydroxylase 1 protein-coding unique_peak1_23_60_1.08303813052921_6.47225640282749_5.89956583903499 chr11 87764074 87764687 + 5.89956583903499 NA exon (NM_172449, exon 5 of 32) exon (NM_172449, exon 5 of 32) 3839 NM_172449 207777 Mm.342019 NM_172449 ENSMUSG00000034156 Bzrap1 D230016K05|PRAX-1|Tspoap1|mKIAA0612 benzodiazepine receptor associated protein 1 protein-coding common_peak1_181_1281_0.274776807287662_10.4615689502626_5.89923010968859 chr11 50324812 50325759 + 5.89923010968859 NA intron (NM_001110500, intron 1 of 14) CpG 388 NM_001110499 12330 Mm.248827 NM_007597 ENSMUSG00000020368 Canx 1110069N15Rik|AI988026|Cnx|D11Ertd153e calnexin protein-coding common_peak1_194_1996_-0.242569580957792_10.8423338269651_5.89916266417277 chr4 137367185 137369008 + 5.89916266417277 NA Intergenic Intergenic -10337 NM_001243769 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak1_29_89_0.916803336268028_6.95025476446369_5.8951872012948 chr11 52568763 52569461 + 5.8951872012948 NA Intergenic Intergenic 172684 NM_153117 213673 Mm.291979 NM_153117 ENSMUSG00000036275 9530068E07Rik C85061|Kct2 RIKEN cDNA 9530068E07 gene protein-coding common_peak2_29_89_0.916803336268028_6.95025476446369_5.8951872012948 chr19 6296984 6297764 + 5.8951872012948 NA intron (NM_010119, intron 3 of 4) B1_Mus1|SINE|Alu -9083 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak1_29_89_0.916803336268028_6.95025476446369_5.8951872012948-2 chr11 93987869 93988580 + 5.8951872012948 NA Intergenic Intergenic -7867 NM_001199203 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding common_peak1_29_89_0.916803336268028_6.95025476446369_5.8951872012948-3 chr3 95526583 95527295 + 5.8951872012948 NA intron (NM_021281, intron 1 of 7) intron (NM_021281, intron 1 of 7) 153 NM_001267695 13040 Mm.3619 NM_021281 ENSMUSG00000038642 Ctss Cats cathepsin S protein-coding unique_peak2_4_64_-1.78445820777039_5.13013870914326_5.89487472163279 chr8 43318936 43319596 + 5.89487472163279 NA Intergenic RLTR4_MM-int|LTR|ERV1 -12257 NM_009556 22702 Mm.285848 NM_009556 ENSMUSG00000051176 Zfp42 Rex-1|Rex1|Zfp-42 zinc finger protein 42 protein-coding common_peak1_83_790_-0.396834618301581_9.429116575322_5.89467593842008 chr14 70152919 70154031 + 5.89467593842008 NA TTS (NM_001004155) TTS (NM_001004155) 316 NM_146055 219158 Mm.218284 NM_146055 ENSMUSG00000033712 Ccar2 2610301G19Rik|Dbc1|mKIAA1967 cell cycle activator and apoptosis regulator 2 protein-coding common_peak1_44_412_-0.563819333854815_8.40808830449204_5.89465198288895 chr15 66559087 66559933 + 5.89465198288895 NA intron (NM_172514, intron 1 of 9) intron (NM_172514, intron 1 of 9) 1536 NM_172514 213068 Mm.132299 NM_172514 ENSMUSG00000036944 Tmem71 AI661017|E430024D12 transmembrane protein 71 protein-coding common_peak2_95_912_-0.367470959519414_9.65073557022452_5.89413841212337 chr4 21775770 21777760 + 5.89413841212337 NA intron (NM_152825, intron 1 of 17) MIR|SINE|MIR 495 NM_152825 77593 Mm.154306 NM_152825 ENSMUSG00000040455 Usp45 3110003C05Rik|4930550B20Rik|AI843191|Gcap7 ubiquitin specific petidase 45 protein-coding common_peak1_119_1163_-0.322994287937867_10.0233781989393_5.89403978298414 chr10 8504947 8506490 + 5.89403978298414 NA intron (NM_177387, intron 1 of 7) (TG)n|Simple_repeat|Simple_repeat 13107 NM_177387 338362 Mm.41163 NM_177387 ENSMUSG00000047712 Ust D930010O20Rik|UA2OST uronyl-2-sulfotransferase protein-coding common_peak2_70_343_0.506894791144919_8.67971215027456_5.89329420033447 chr10 127210877 127212231 + 5.89329420033447 NA promoter-TSS (NM_054097) promoter-TSS (NM_054097) 68 NM_054097 117150 Mm.22682 NM_054097 ENSMUSG00000025417 Pip4k2c Pip5k2c phosphatidylinositol-5-phosphate 4-kinase, type II, gamma protein-coding common_peak1_110_650_0.377404434199061_9.53521595026517_5.89324853930019 chr8 120824179 120825713 + 5.89324853930019 NA Intergenic Intergenic 86307 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_110_650_0.377404434199061_9.53521595026517_5.89324853930019 chr11 106539872 106543329 + 5.89324853930019 NA intron (NM_198292, intron 5 of 11) L1MC5a|LINE|L1 40609 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA common_peak2_329_3638_-0.177288490116108_11.7406820907836_5.89157372159566 chr14 54462633 54465482 + 5.89157372159566 NA promoter-TSS (NM_022993) promoter-TSS (NM_022993) -90 NM_022993 65107 Mm.472719 NM_022993 ENSMUSG00000022175 Lrp10 Lrp9 low-density lipoprotein receptor-related protein 10 protein-coding common_peak2_39_143_0.74782153737482_7.54383577012972_5.89156939029198 chr9 44873926 44874879 + 5.89156939029198 NA intron (NM_001081049, intron 1 of 35) intron (NM_001081049, intron 1 of 35) 6872 NM_001081049 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak2_25_242_-0.769391258964849_7.54011687412336_5.89156939029198 chr12 69227557 69228604 + 5.89156939029198 NA intron (NM_011133, intron 1 of 18) CpG 110 NM_011133 18974 Mm.9199 NM_011133 ENSMUSG00000020974 Pole2 - polymerase (DNA directed), epsilon 2 (p59 subunit) protein-coding common_peak1_79_408_0.468401817061739_8.91015794147262_5.89126836584259 chr2 131491574 131492857 + 5.89126836584259 NA intron (NM_145533, intron 1 of 6) CpG 353 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak1_79_408_0.468401817061739_8.91015794147262_5.89126836584259-2 chr8 69395129 69396073 + 5.89126836584259 NA promoter-TSS (NR_038044) promoter-TSS (NR_038044) -57 NR_038043 378466 Mm.37846 NM_194351 ENSMUSG00000110444 Gm10033 9330175B10Rik|ENSMUSG00000057924|Gm10311 predicted gene 10033 ncRNA common_peak2_58_261_0.572103403504375_8.31947470328964_5.88870277064895 chr18 32406041 32407626 + 5.88870277064895 NA intron (NM_001083334, intron 2 of 14) intron (NM_001083334, intron 2 of 14) -28549 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA common_peak1_131_1291_-0.304845784660333_10.1829674623638_5.88863978739534 chr18 82470951 82473255 + 5.88863978739534 NA Intergenic MLT1G3|LTR|ERVL-MaLR -3020 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_90_491_0.429830537380807_9.15742977402964_5.88862357869173 chr11 86806972 86808082 + 5.88862357869173 NA exon (NM_026191, exon 1 of 18) exon (NM_026191, exon 1 of 18) 133 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding common_peak2_76_386_0.480531784628656_8.83645564845874_5.88836222073993 chr14 25693469 25695082 + 5.88836222073993 NA exon (NM_134084, exon 1 of 6) exon (NM_134084, exon 1 of 6) 105 NM_134084 105675 Mm.41656 NM_134084 ENSMUSG00000021868 Ppif AW457192|CyP-D|CyP-F|CypD|PPIase peptidylprolyl isomerase F (cyclophilin F) protein-coding unique_peak2_49_459_-0.532862547621635_8.57905877713356_5.88805183491975 chr14 74996283 74997737 + 5.88805183491975 NA Intergenic Intergenic -19017 NM_198642 271221 Mm.320280 NM_198642 ENSMUSG00000034959 Rubcnl 5031414D18Rik|Gm744|Gm911|Kiaa0226l RUN and cysteine rich domain containing beclin 1 interacting protein like protein-coding common_peak1_26_74_0.993388876343714_6.72551312866774_5.88663582251303 chr5 112289221 112289783 + 5.88663582251303 NA intron (NM_009419, intron 1 of 6) intron (NM_009419, intron 1 of 6) 12795 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_80_760_-0.405410560510667_9.36904736324821_5.88592532672501 chr7 28701928 28704024 + 5.88592532672501 NA Intergenic Intergenic 9832 NM_001163702 233040 Mm.116116 NM_207238 ENSMUSG00000037463 Fbxo27 E130008B10Rik|FBG5|Gm161 F-box protein 27 protein-coding common_peak2_212_2205_-0.229923013591081_10.9922555687958_5.88575770325072 chr6 47635442 47638014 + 5.88575770325072 NA Intergenic Intergenic 18366 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_147_967_0.31414503630953_10.0759357554294_5.88544826328933 chr1 36708634 36710068 + 5.88544826328933 NA intron (NM_146107, intron 1 of 10) LFSINE_Vert|SINE|tRNA 574 NM_146107 226977 Mm.28521 NM_146107 ENSMUSG00000037351 Actr1b 2310066K23Rik|AA960180|AI851923|Arp1b ARP1 actin-related protein 1B, centractin beta protein-coding common_peak1_28_84_0.939272378374866_6.87902712532513_5.88533101657309 chr10 75329594 75330229 + 5.88533101657309 NA intron (NM_009630, intron 2 of 2) intron (NM_009630, intron 2 of 2) 13034 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak2_66_621_-0.45022706998088_9.05565723514016_5.88437056727155 chr8 84831467 84832911 + 5.88437056727155 NA promoter-TSS (NR_033145) promoter-TSS (NR_033145) 76 NR_033145 23863 Mm.304252 NM_201227 ENSMUSG00000053226 Dand5 Cerl-2|Cerr2|Dte|GREM3|coco DAN domain family member 5, BMP antagonist protein-coding common_peak2_245_1918_0.226051096209686_11.0191645443002_5.88432894683623 chr15 83463140 83465492 + 5.88432894683623 NA intron (NM_001159509, intron 1 of 10) CpG 290 NM_001159509 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_371_3303_0.174043371840856_11.7770196573399_5.88290175466677 chr1 138286692 138290242 + 5.88290175466677 NA 3' UTR (NM_177397, exon 3 of 3) 3' UTR (NM_177397, exon 3 of 3) 14729 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding unique_peak2_13_139_-1.0693305781134_6.59461772788827_5.88263072267307-3 chr5 98016281 98017518 + 5.88263072267307 NA intron (NM_133738, intron 3 of 16) intron (NM_133738, intron 3 of 16) 14063 NM_133738 71914 Mm.24842 NM_133738 ENSMUSG00000029338 Antxr2 2310046B19Rik|AW561899|CMG-2|CMG2|cI-35 anthrax toxin receptor 2 protein-coding unique_peak2_13_139_-1.0693305781134_6.59461772788827_5.88263072267307 chr10 99393046 99394181 + 5.88263072267307 NA Intergenic Intergenic 130382 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding unique_peak2_13_139_-1.0693305781134_6.59461772788827_5.88263072267307-2 chr2 79892983 79894181 + 5.88263072267307 NA intron (NM_001009978, intron 5 of 12) Lx5|LINE|L1 14817 NM_001009979 18573 Mm.40678 NM_016744 ENSMUSG00000059173 Pde1a AI987702|AW125737 phosphodiesterase 1A, calmodulin-dependent protein-coding common_peak1_13_139_-1.0693305781134_6.59461772788827_5.88263072267307 chr8 123859667 123859984 + 5.88263072267307 NA intron (NM_028536, intron 1 of 3) CpG-14647 384 NM_028536 73420 Mm.157746 NM_028536 ENSMUSG00000031971 Ccsap 1700054N08Rik|AI853424 centriole, cilia and spindle associated protein protein-coding common_peak2_149_985_0.311318183098113_10.101102927927_5.88255993904737 chr4 119910647 119913212 + 5.88255993904737 NA intron (NM_010657, intron 1 of 8) intron (NM_010657, intron 1 of 8) 97251 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak2_27_79_0.964636655130563_6.80424642245264_5.88210889808247 chr10 6978536 6979140 + 5.88210889808247 NA intron (NM_001033391, intron 2 of 7) intron (NM_001033391, intron 2 of 7) 1627 NM_001170800 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak1_27_79_0.964636655130563_6.80424642245264_5.88210889808247-2 chr19 10698074 10698568 + 5.88210889808247 NA intron (NM_181403, intron 1 of 4) intron (NM_181403, intron 1 of 4) 9506 NM_181403 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding common_peak1_27_79_0.964636655130563_6.80424642245264_5.88210889808247-3 chr5 73248935 73249495 + 5.88210889808247 NA intron (NM_028194, intron 1 of 62) B3|SINE|B2 7403 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_27_79_0.964636655130563_6.80424642245264_5.88210889808247 chr13 62623725 62624388 + 5.88210889808247 NA 5' UTR (NM_173381, exon 1 of 3) 5' UTR (NM_173381, exon 1 of 3) 126 NM_173381 211378 Mm.247448 NM_173381 ENSMUSG00000072066 6720489N17Rik 9330128I06 RIKEN cDNA 6720489N17 gene protein-coding unique_peak1_22_56_1.10557078992877_6.38567540912913_5.88156489350891 chr17 84353831 84354405 + 5.88156489350891 NA intron (NM_183021, intron 26 of 37) L1M4c|LINE|L1 112090 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak1_22_56_1.10557078992877_6.38567540912913_5.88156489350891-2 chr5 21210636 21211102 + 5.88156489350891 NA intron (NM_175437, intron 5 of 30) LTR16C|LTR|ERVL 24602 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_22_56_1.10557078992877_6.38567540912913_5.88156489350891 chr19 21946781 21947168 + 5.88156489350891 NA Intergenic Intergenic 168634 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_244_1907_0.227136367783494_11.0114136398973_5.88109006127806 chr11 121353318 121355367 + 5.88109006127806 NA 5' UTR (NM_025793, exon 1 of 10) 5' UTR (NM_025793, exon 1 of 10) 105 NM_025793 66840 Mm.103986 NM_025793 ENSMUSG00000025173 Wdr45b 0610008N23Rik|AA408735|D16Bwg0193e|WIPI-3|Wdr45l WD repeat domain 45B protein-coding common_peak1_55_515_-0.498050194218973_8.76220215831377_5.88029317064592 chr11 69123600 69124531 + 5.88029317064592 NA TTS (NM_033041) TTS (NM_033041) -2312 NM_011786 23801 Mm.41989 NM_011786 ENSMUSG00000020892 Aloxe3 e-LOX-3|eLOX-3 arachidonate lipoxygenase 3 protein-coding common_peak1_119_725_0.358055316974665_9.68285339648308_5.8800000375033 chr11 96666134 96667659 + 5.8800000375033 NA intron (NM_001033186, intron 4 of 12) intron (NM_001033186, intron 4 of 12) 110659 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding common_peak2_59_554_-0.481075217453409_8.87580635251076_5.87708335063253 chr1 36511262 36512826 + 5.87708335063253 NA exon (NM_053186, exon 1 of 8) exon (NM_053186, exon 1 of 8) 168 NM_053186 94218 Mm.256323 NM_053186 ENSMUSG00000001138 Cnnm3 Acdp3|Clp3|mACDP3 cyclin M3 protein-coding common_peak1_59_554_-0.481075217453409_8.87580635251076_5.87708335063253 chr9 123478641 123479626 + 5.87708335063253 NA 5' UTR (NM_013860, exon 1 of 8) 5' UTR (NM_013860, exon 1 of 8) 432 NM_013860 29806 Mm.10987 NM_013860 ENSMUSG00000025239 Limd1 AW822033|D9Ertd192e LIM domains containing 1 protein-coding common_peak2_120_733_0.356930591792235_9.69810154873933_5.87689930708239 chr10 82698331 82700238 + 5.87689930708239 NA exon (NM_001081218, exon 1 of 15) exon (NM_001081218, exon 1 of 15) 277 NM_001081218 67933 Mm.127405 NM_026462 ENSMUSG00000020246 Hcfc2 1700129L13Rik|AU019838 host cell factor C2 protein-coding common_peak2_160_1085_0.297188525554617_10.2334026505817_5.87656653010965 chr16 11474512 11477193 + 5.87656653010965 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 70204 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak1_69_650_-0.438455707455745_9.12728587943776_5.8757597178366 chr12 69416135 69417470 + 5.8757597178366 NA Intergenic Intergenic 44652 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak1_151_1004_0.307221350889666_10.1265904615111_5.87556316539321 chr14 70074056 70075941 + 5.87556316539321 NA Intergenic CpG -2447 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding common_peak1_156_1049_0.301302021852164_10.1868246234796_5.87427834322121 chr4 133967148 133968018 + 5.87427834322121 NA intron (NM_016957, intron 1 of 5) CpG 408 NM_016957 15331 Mm.319660 NM_016957 ENSMUSG00000003038 Hmgn2 HMG-17|Hmg17 high mobility group nucleosomal binding domain 2 protein-coding common_peak1_38_137_0.764418992829691_7.49073395319301_5.87266625422029 chr19 41335918 41336731 + 5.87266625422029 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 48746 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_38_137_0.764418992829691_7.49073395319301_5.87266625422029-3 chr5 104957706 104958271 + 5.87266625422029 NA intron (NM_030239, intron 10 of 15) MTD|LTR|ERVL-MaLR 24729 NM_030239 27405 Mm.389663 NM_030239 ENSMUSG00000029299 Abcg3 Abcp2|Mxr2 ATP-binding cassette, sub-family G (WHITE), member 3 protein-coding common_peak1_38_137_0.764418992829691_7.49073395319301_5.87266625422029-2 chr2 165453132 165454056 + 5.87266625422029 NA intron (NM_054055, intron 1 of 12) intron (NM_054055, intron 1 of 12) 19603 NM_054055 114644 Mm.250738 NM_054055 ENSMUSG00000018459 Slc13a3 NaDC-3|NaDC3|SDCT2 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 protein-coding common_peak1_102_984_-0.352432030567_9.76776389906024_5.87239278017612 chr13 60847632 60849613 + 5.87239278017612 NA intron (NM_178098, intron 5 of 7) B1_Mur4|SINE|Alu 15794 NM_178098 214639 Mm.19839 NM_178098 ENSMUSG00000050345 4930486L24Rik AW545031 RIKEN cDNA 4930486L24 gene protein-coding common_peak1_37_348_-0.620106711626407_8.13702987039645_5.87171328216477 chr4 132973895 132974525 + 5.87171328216477 NA 5' UTR (NM_010208, exon 1 of 13) 5' UTR (NM_010208, exon 1 of 13) 115 NM_010208 14191 Mm.271665 NM_010208 ENSMUSG00000028874 Fgr - FGR proto-oncogene, Src family tyrosine kinase protein-coding unique_peak2_10_114_-1.21230461943678_6.23933774122599_5.8712114738932 chr4 35155833 35156699 + 5.8712114738932 NA intron (NM_178061, intron 1 of 3) intron (NM_178061, intron 1 of 3) 1218 NM_178061 214944 Mm.32968 NM_178061 ENSMUSG00000073910 Mob3b 8430436F23Rik|A430018A01Rik|Mobkl2b MOB kinase activator 3B protein-coding common_peak2_132_836_0.334816500112018_9.87649206260635_5.86854547935966 chr4 145276447 145279753 + 5.86854547935966 NA intron (NM_009401, intron 10 of 12) intron (NM_009401, intron 10 of 12) -31230 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_113_675_0.370231594454348_9.58599523350936_5.86788595357113 chr13 92609949 92611799 + 5.86788595357113 NA promoter-TSS (NM_172588) promoter-TSS (NM_172588) -264 NM_172588 218442 Mm.297970 NM_172588 ENSMUSG00000021703 Serinc5 A130038L21Rik|AIGP3|C86123|TPO1 serine incorporator 5 protein-coding common_peak2_113_675_0.370231594454348_9.58599523350936_5.86788595357113-2 chr8 116626899 116629157 + 5.86788595357113 NA intron (NM_029441, intron 1 of 6) intron (NM_029441, intron 1 of 6) 104963 NM_029441 75796 Mm.159575 NM_029441 ENSMUSG00000031758 Cdyl2 1700029M19Rik|4930453I21Rik|Gm20194 chromodomain protein, Y chromosome-like 2 protein-coding common_peak1_24_65_1.04162107277793_6.56520465574742_5.86631130274117-3 chr17 87325917 87326302 + 5.86631130274117 NA intron (NM_028639, intron 8 of 19) intron (NM_028639, intron 8 of 19) 43223 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak1_24_65_1.04162107277793_6.56520465574742_5.86631130274117-5 chr2 31106782 31107318 + 5.86631130274117 NA intron (NM_001177648, intron 1 of 16) intron (NM_001177648, intron 1 of 16) -10550 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_24_65_1.04162107277793_6.56520465574742_5.86631130274117-2 chr13 9762965 9763473 + 5.86631130274117 NA intron (NM_001199141, intron 1 of 14) intron (NM_001199141, intron 1 of 14) 2095 NM_001199141 66505 Mm.397307 NM_144516 ENSMUSG00000021156 Zmynd11 2210402G22Rik|BS69 zinc finger, MYND domain containing 11 protein-coding common_peak1_24_65_1.04162107277793_6.56520465574742_5.86631130274117-4 chr19 32680422 32681023 + 5.86631130274117 NA intron (NM_026487, intron 8 of 9) intron (NM_026487, intron 8 of 9) 31576 NM_026487 67979 Mm.27123 NM_026487 ENSMUSG00000013662 Atad1 4921525H23Rik|AW107648|Thorase ATPase family, AAA domain containing 1 protein-coding common_peak1_24_65_1.04162107277793_6.56520465574742_5.86631130274117 chr10 7825198 7825758 + 5.86631130274117 NA Intergenic Intergenic -6992 NM_172785 237256 Mm.140055 NM_172785 ENSMUSG00000039981 Zc3h12d D730019B10Rik|TFL zinc finger CCCH type containing 12D protein-coding common_peak2_64_602_-0.459099671567188_9.00646435611649_5.86605818490179 chr4 83532996 83535051 + 5.86605818490179 NA intron (NM_001081012, intron 1 of 25) intron (NM_001081012, intron 1 of 25) 8478 NM_001081012 320226 Mm.180032 NM_029117 ENSMUSG00000052407 Ccdc171 4930418J05Rik|4930473A06Rik|A330015D16Rik coiled-coil domain containing 171 protein-coding common_peak2_46_431_-0.551756414737451_8.47900929479474_5.86601837227982 chr11 100622590 100623617 + 5.86601837227982 NA intron (NM_028024, intron 1 of 3) intron (NM_028024, intron 1 of 3) 148 NM_028024 71966 Mm.274734 NM_028024 ENSMUSG00000017837 Nkiras2 2410003M04Rik|4930527H08Rik|D630018G21Rik|KBRAS2 NFKB inhibitor interacting Ras-like protein 2 protein-coding unique_peak2_80_416_0.462438509548216_8.93512282821877_5.86460034102397 chr14 121347527 121350455 + 5.86460034102397 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 30239 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_32_303_-0.670607565782706_7.91262373055223_5.86322466590356 chr11 120629195 120629946 + 5.86322466590356 NA exon (NM_010756, exon 3 of 3) exon (NM_010756, exon 3 of 3) 3977 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding common_peak1_396_3595_0.166964904093531_11.8956597575612_5.8626783228896 chr15 76316142 76318853 + 5.8626783228896 NA Intergenic (TTTC)n|Simple_repeat|Simple_repeat -9900 NM_175399 109075 Mm.322752 NM_175399 ENSMUSG00000034259 Exosc4 1110039I09Rik|1500001N04Rik|Rrp41 exosome component 4 protein-coding common_peak1_62_582_-0.465742913248715_8.95448061657614_5.86152935412634 chr12 21479766 21480393 + 5.86152935412634 NA Intergenic Intergenic -62643 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_48_449_-0.536904954306353_8.54532871406386_5.86002099907276 chr13 22040718 22041512 + 5.86002099907276 NA exon (NM_175656, exon 1 of 1) exon (NM_175656, exon 1 of 1) 247 NM_175656 319158 Mm.14775 NM_175656 ENSMUSG00000060639 Hist1h4i - histone cluster 1, H4i protein-coding common_peak1_135_862_0.330156445354286_9.9182949718561_5.85945301507095 chr19 28989573 28991056 + 5.85945301507095 NA promoter-TSS (NM_025950) promoter-TSS (NM_025950) -38 NM_001302382 67072 Mm.78875 NM_025950 ENSMUSG00000024780 Cdc37l1 2700033A15Rik|BB159850|Cdc37l|Harc cell division cycle 37-like 1 protein-coding common_peak1_117_1141_-0.325208219134662_9.99474282579551_5.85931087268968 chr15 59795897 59797051 + 5.85931087268968 NA Intergenic Intergenic -1515 NR_045076 100503021 Mm.402924 NR_045076 Gm19510 - predicted gene, 19510 ncRNA common_peak2_49_203_0.640202161351246_7.99252642264712_5.85872374897787 chr10 13498685 13500021 + 5.85872374897787 NA Intergenic MTEb|LTR|ERVL-MaLR -1675 NM_025799 66848 Mm.26625 NM_025799 ENSMUSG00000019810 Fuca2 0610025O11Rik|5530401P20Rik fucosidase, alpha-L- 2, plasma protein-coding common_peak2_77_394_0.473846917729752_8.86263230192934_5.85851815787392 chr17 88529433 88530890 + 5.85851815787392 NA promoter-TSS (NM_028658) promoter-TSS (NM_028658) 37 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding common_peak2_237_2500_-0.214604660754972_11.1809870118035_5.85842287977077 chr16 32649562 32655347 + 5.85842287977077 NA intron (NM_016788, intron 1 of 15) intron (NM_016788, intron 1 of 15) 7811 NM_016788 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding unique_peak2_6_81_-1.52421187697287_5.59544606613165_5.85796261953752-2 chr7 44360100 44360721 + 5.85796261953752 NA intron (NM_027049, intron 5 of 5) CpG 14620 NM_027049 69349 Mm.358922 NM_027049 ENSMUSG00000008028 1700008O03Rik - RIKEN cDNA 1700008O03 gene protein-coding unique_peak2_6_81_-1.52421187697287_5.59544606613165_5.85796261953752 chr15 4085113 4085753 + 5.85796261953752 NA intron (NM_024188, intron 7 of 16) MLTR25C|LTR|ERVK -58027 NR_028266 414066 Mm.394461 NR_028266 BC037032 - cDNA Sequence BC037032 ncRNA common_peak2_104_1004_-0.347399555389472_9.79928000837156_5.85743695424774 chr10 80114266 80115650 + 5.85743695424774 NA promoter-TSS (NM_001301854) promoter-TSS (NM_001301854) -845 NM_001301853 20869 Mm.44231 NM_011492 ENSMUSG00000003068 Stk11 AA408040|Lkb1|Par-4|R75140 serine/threonine kinase 11 protein-coding common_peak1_250_2657_-0.208327908462175_11.2719614350451_5.85650990546066 chr2 156188968 156191336 + 5.85650990546066 NA Intergenic B2_Mm2|SINE|B2 -6495 NM_172674 228829 Mm.427078 NM_172674 ENSMUSG00000038116 Phf20 6820402O20Rik PHD finger protein 20 protein-coding common_peak1_118_1151_-0.322852631202668_10.008498685841_5.85643369695979 chr11 5149959 5152383 + 5.85643369695979 NA intron (NM_080595, intron 1 of 14) intron (NM_080595, intron 1 of 14) 1051 NM_080595 140703 Mm.840 NM_080595 ENSMUSG00000034164 Emid1 AW122071|CO-5|Emu1 EMI domain containing 1 protein-coding common_peak1_345_3006_0.181713690104903_11.6449659976265_5.85522354866698 chr4 83314455 83317090 + 5.85522354866698 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 8417 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak2_124_767_0.349158278293547_9.75954163986793_5.85478895033216 chr7 75880371 75882398 + 5.85478895033216 NA Intergenic PB1D10|SINE|Alu 33046 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_57_254_0.580922188840067_8.28481453127889_5.85394143576286 chr10 42886744 42887629 + 5.85394143576286 NA intron (NM_172938, intron 1 of 8) intron (NM_172938, intron 1 of 8) 26674 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak1_108_634_0.381129453870107_9.50117750859458_5.85353407770684 chr11 83561383 83562875 + 5.85353407770684 NA Intergenic Intergenic 16507 NM_011338 20308 Mm.416125 NM_011338 ENSMUSG00000019122 Ccl9 CCF18|MRP-2|Scya10|Scya9 chemokine (C-C motif) ligand 9 protein-coding common_peak1_53_228_0.609616089929007_8.14401183306145_5.85211242778125 chr3 52400788 52401912 + 5.85211242778125 NA Intergenic Intergenic 133013 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_115_692_0.365176394748067_9.61929973951125_5.8509557868958 chr6 145211208 145212028 + 5.8509557868958 NA promoter-TSS (NM_177222) promoter-TSS (NM_177222) 471 NM_133688 67636 Mm.486359 NM_133688 ENSMUSG00000040370 Lyrm5 4930469P12Rik|AL022899|Etfrf1|Ghiso LYR motif containing 5 protein-coding common_peak2_115_692_0.365176394748067_9.61929973951125_5.8509557868958 chr1 78488261 78489793 + 5.8509557868958 NA promoter-TSS (NM_001278075) promoter-TSS (NM_001278075) -130 NR_102757 23874 Mm.17898 NM_011811 ENSMUSG00000026245 Farsb C76708|Farsa|Farsl|Farslb|Frsb phenylalanyl-tRNA synthetase, beta subunit protein-coding common_peak1_97_546_0.408091525304483_9.2994427854448_5.85074843593612 chr12 4476174 4477227 + 5.85074843593612 NA intron (NM_010881, intron 1 of 22) intron (NM_010881, intron 1 of 22) 482 NM_010881 17977 Mm.301039 NM_010881 ENSMUSG00000020647 Ncoa1 KAT13A|NCoA-1|NRC-1|SRC-1|SRC-a|SRC1|bHLHe74|mNRC-1 nuclear receptor coactivator 1 protein-coding common_peak1_81_423_0.460135121688584_8.95798801540749_5.85037985354896 chr6 134791781 134792723 + 5.85037985354896 NA intron (NM_130447, intron 1 of 6) GC_rich|Low_complexity|Low_complexity 376 NM_130447 70686 Mm.491182 NM_130447 ENSMUSG00000030203 Dusp16 3830417M17Rik|AW558566|D6Ertd213e|MKP-7|MKP7|Mkpm dual specificity phosphatase 16 protein-coding common_peak2_279_2277_0.207730616374493_11.2574173398954_5.8502694368746 chr11 78598597 78602339 + 5.8502694368746 NA intron (NM_008702, intron 3 of 10) intron (NM_008702, intron 3 of 10) -49733 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e transmembrane protein 97 protein-coding common_peak1_90_860_-0.377524384676796_9.56110723505845_5.84989801294746 chr5 115520036 115521364 + 5.84989801294746 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 14024 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding unique_peak2_8_97_-1.3366367934289_5.94639144740076_5.84819576547508 chr6 86647739 86648548 + 5.84819576547508 NA 3' UTR (NM_010751, exon 6 of 6) 3' UTR (NM_010751, exon 6 of 6) 19969 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak1_18_39_1.27843610850953_5.96114614914213_5.84819576547506-2 chr9 123939981 123940375 + 5.84819576547506 NA Intergenic (ATGTG)n|Simple_repeat|Simple_repeat 28514 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding unique_peak1_18_39_1.27843610850953_5.96114614914213_5.84819576547506 chr1 54557241 54557711 + 5.84819576547506 NA exon (NM_001163314, exon 1 of 27) exon (NM_001163314, exon 1 of 27) 208 NM_001163314 241062 Mm.103539 NM_175508 ENSMUSG00000073678 Pgap1 5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto post-GPI attachment to proteins 1 protein-coding unique_peak1_18_39_1.27843610850953_5.96114614914213_5.84819576547506-2 chr5 115056029 115056524 + 5.84819576547506 NA intron (NM_029012, intron 1 of 10) B1_Mus1|SINE|Alu 44752 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak1_18_39_1.27843610850953_5.96114614914213_5.84819576547506 chr12 110602465 110602882 + 5.84819576547506 NA intron (NM_030238, intron 1 of 76) intron (NM_030238, intron 1 of 76) 1278 NM_030238 13424 Mm.181430 NM_030238 ENSMUSG00000018707 Dync1h1 9930018I23Rik|AI894280|DHC1|DHC1a|DNCL|Dnchc1|Dnec1|Dnecl|Loa|MAP1C|P22|Swl|mKIAA0325 dynein cytoplasmic 1 heavy chain 1 protein-coding common_peak1_154_1542_-0.276734554958107_10.4531550690917_5.84790960128858 chr5 134183653 134184573 + 5.84790960128858 NA promoter-TSS (NM_053266) promoter-TSS (NM_053266) 75 NM_053266 114674 Mm.218744 NM_053266 ENSMUSG00000015942 Gtf2ird2 1700012P16Rik GTF2I repeat domain containing 2 protein-coding common_peak2_154_1542_-0.276734554958107_10.4531550690917_5.84790960128858 chr17 27621980 27624461 + 5.84790960128858 NA promoter-TSS (NM_001291046) promoter-TSS (NM_001291046) 232 NM_019837 56409 Mm.144699 NM_019837 ENSMUSG00000024213 Nudt3 1110011B09Rik|AA960325|Dipp|Dipp1 nudix (nucleotide diphosphate linked moiety X)-type motif 3 protein-coding unique_peak2_31_294_-0.68170556993768_7.86371835928036_5.847427917383 chr2 178513032 178515031 + 5.847427917383 NA Intergenic Intergenic 83516 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak1_31_294_-0.68170556993768_7.86371835928036_5.847427917383 chr8 111876156 111876796 + 5.847427917383 NA intron (NM_025781, intron 1 of 2) CpG 199 NM_025781 66817 Mm.345350 NM_025781 ENSMUSG00000031953 Tmem170 9030409E16Rik|AA403674|D8Bwg1414e|Tmem170a transmembrane protein 170 protein-coding common_peak1_54_505_-0.501702556308395_8.73214229654011_5.84632221909045 chr15 78593891 78594944 + 5.84632221909045 NA Intergenic Intergenic -2630 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak1_76_719_-0.415131555556608_9.28428731855137_5.84610282051289 chr11 11714922 11716195 + 5.84610282051289 NA intron (NM_001301866, intron 3 of 5) B1_Mus2|SINE|Alu 25381 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_76_719_-0.415131555556608_9.28428731855137_5.84610282051289 chr14 121797043 121798984 + 5.84610282051289 NA promoter-TSS (NM_134074) promoter-TSS (NM_134074) -279 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding unique_peak1_25_70_1.00567412513625_6.65258418207281_5.84547969814266-2 chr2 128388801 128389362 + 5.84547969814266 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 40270 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA unique_peak1_25_70_1.00567412513625_6.65258418207281_5.84547969814266 chr13 24442140 24442732 + 5.84547969814266 NA intron (NM_001284520, intron 9 of 14) PB1D7|SINE|Alu 27314 NM_001284520 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding common_peak1_50_468_-0.525773335387919_8.61055744482142_5.84536448658875 chr14 67714926 67715694 + 5.84536448658875 NA promoter-TSS (NM_134073) promoter-TSS (NM_134073) 300 NM_001110162 108912 Mm.33831 NM_175384 ENSMUSG00000048922 Cdca2 2610311M19Rik|AI586158 cell division cycle associated 2 protein-coding common_peak1_95_911_-0.365889923699934_9.64994505231477_5.84273271069538 chr10 77522731 77524053 + 5.84273271069538 NA Intergenic Intergenic -6956 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding common_peak2_426_3953_0.158958404583235_12.0285763580208_5.84265894198494 chr1 54908387 54917886 + 5.84265894198494 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 13251 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_41_155_0.718684736122606_7.64474458692355_5.84196111611058 chr2 23012310 23013311 + 5.84196111611058 NA intron (NM_001077190, intron 1 of 10) MMVL30-int|LTR|ERV1 27431 NM_001077192 11308 Mm.205647 NM_007380 ENSMUSG00000058835 Abi1 E3B1|NAP1|Ssh3bp1|abi-1 abl-interactor 1 protein-coding common_peak2_45_421_-0.55602607342732_8.44308615199353_5.84158719087818 chr4 57306385 57308100 + 5.84158719087818 NA Intergenic Intergenic -5405 NM_011207 545622 Mm.246552 NM_011207 ENSMUSG00000038764 Ptpn3 9530011I20Rik|PTP-H1|PTPCL protein tyrosine phosphatase, non-receptor type 3 protein-coding common_peak2_272_2202_0.211225779172448_11.2108666692871_5.8399515890238 chr7 72305311 72308681 + 5.8399515890238 NA promoter-TSS (NM_001024703) promoter-TSS (NM_001024703) -401 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak1_35_329_-0.635024541186793_8.04880994365242_5.8391901696605 chr6 99248153 99248897 + 5.8391901696605 NA intron (NM_001197321, intron 2 of 17) intron (NM_001197321, intron 2 of 17) 17990 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_16_164_-0.962785953271644_6.88492923760999_5.83886125469432 chr1 173433826 173434301 + 5.83886125469432 NA intron (NM_001013779, intron 2 of 8) intron (NM_001013779, intron 2 of 8) 13459 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_16_164_-0.962785953271644_6.88492923760999_5.83886125469432-2 chr7 80776379 80776783 + 5.83886125469432 NA intron (NM_016721, intron 2 of 37) PB1D11|SINE|Alu 26750 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding unique_peak2_12_130_-1.10461406808287_6.48111596749601_5.83814175871396-3 chrX 134585688 134586436 + 5.83814175871396 NA intron (NM_019865, intron 1 of 4) CpG 408 NM_019865 19982 Mm.286408 NM_019865 ENSMUSG00000079435 Rpl36a L44L|Rpl44 ribosomal protein L36A protein-coding unique_peak2_12_130_-1.10461406808287_6.48111596749601_5.83814175871396-2 chr4 44065270 44066084 + 5.83814175871396 NA intron (NM_001190414, intron 2 of 11) intron (NM_001190414, intron 2 of 11) 6996 NM_001190414 50798 Mm.256718 NM_015828 ENSMUSG00000028479 Gne 2310066H07Rik|DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding unique_peak2_12_130_-1.10461406808287_6.48111596749601_5.83814175871396 chr1 80362323 80363365 + 5.83814175871396 NA Intergenic ORR1F|LTR|ERVL-MaLR -22154 NM_016716 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding common_peak1_171_1188_0.283418792881006_10.3572423961862_5.83803207549955 chr6 59208650 59210019 + 5.83803207549955 NA intron (NM_001081145, intron 1 of 1) intron (NM_001081145, intron 1 of 1) 464 NM_001081145 68140 Mm.25843 NM_001081145 ENSMUSG00000049232 Tigd2 3632410O17Rik tigger transposable element derived 2 protein-coding unique_peak2_20_198_-0.859149976745151_7.20704963217107_5.83755101722132 chr7 47103406 47104765 + 5.83755101722132 NA intron (NM_001163565, intron 2 of 13) MLT1F2|LTR|ERVL-MaLR -20861 NR_106023 102465639 NR_106023 ENSMUSG00000098960 Mir7056 Gm27696|mmu-mir-7056 microRNA 7056 ncRNA common_peak2_33_110_0.835732705810421_7.21228221925532_5.83755101722132 chr11 95006258 95007253 + 5.83755101722132 NA 3' UTR (NM_172261, exon 10 of 10) 3' UTR (NM_172261, exon 10 of 10) -3124 NM_146025 217125 Mm.297199 NM_146025 ENSMUSG00000047181 Samd14 AI839049|AI854782|BC034054 sterile alpha motif domain containing 14 protein-coding common_peak1_33_110_0.835732705810421_7.21228221925532_5.83755101722132 chr7 122329790 122330393 + 5.83755101722132 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 40966 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak1_33_110_0.835732705810421_7.21228221925532_5.83755101722132-2 chrX 7727820 7728392 + 5.83755101722132 NA promoter-TSS (NM_138602) promoter-TSS (NM_138602) -465 NM_138602 54637 Mm.28850 NM_138602 ENSMUSG00000031149 Praf2 AA986329|C78013|DXImx39e|JM4|Sfc20 PRA1 domain family 2 protein-coding common_peak1_20_198_-0.859149976745151_7.20704963217107_5.83755101722132 chr13 5846981 5847510 + 5.83755101722132 NA Intergenic Intergenic 10847 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_42_393_-0.576324649202425_8.33388949485516_5.83699833730191 chr4 46580091 46580791 + 5.83699833730191 NA intron (NM_001164804, intron 1 of 11) MMTV-int|LTR|ERVK -14001 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak1_21_206_-0.833689214805374_7.27664235009664_5.83687205977648-2 chr19 16781167 16781504 + 5.83687205977648 NA promoter-TSS (NM_173028) promoter-TSS (NM_173028) -402 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding common_peak1_21_206_-0.833689214805374_7.27664235009664_5.83687205977648 chr11 115198521 115198996 + 5.83687205977648 NA intron (NM_001033393, intron 3 of 9) intron (NM_001033393, intron 3 of 9) 11271 NM_001033393 320534 Mm.260587 NM_001033393 ENSMUSG00000045980 Tmem104 C630005D06Rik|mFLJ00021 transmembrane protein 104 protein-coding unique_peak2_7_89_-1.42221214439086_5.78074702413424_5.83538452612164 chr18 79263148 79263855 + 5.83538452612164 NA Intergenic Intergenic -154110 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding unique_peak2_7_89_-1.42221214439086_5.78074702413424_5.83538452612164-3 chr9 96935727 96936266 + 5.83538452612164 NA Intergenic L1_Mur3|LINE|L1 -46522 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding unique_peak2_7_89_-1.42221214439086_5.78074702413424_5.83538452612164-2 chr5 43853074 43853811 + 5.83538452612164 NA Intergenic Intergenic -15367 NM_007646 12494 Mm.249873 NM_007646 ENSMUSG00000029084 Cd38 ADPRC 1|Cd38-rs1|I-19 CD38 antigen protein-coding common_peak2_30_285_-0.693189132044083_7.81327677075635_5.83434853395861 chr4 125173098 125174229 + 5.83434853395861 NA Intergenic Intergenic -45782 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak1_148_977_0.311234347155388_10.0893078285299_5.83424920431838 chr13 45963358 45964896 + 5.83424920431838 NA intron (NM_009124, intron 1 of 7) CpG 864 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_72_358_0.494478992562577_8.73507953010434_5.83335780702561 chr15 9140273 9141382 + 5.83335780702561 NA promoter-TSS (NM_013787) promoter-TSS (NM_013787) 257 NM_177178 320506 Mm.259886 NM_177178 ENSMUSG00000039704 Lmbrd2 9930036E21Rik LMBR1 domain containing 2 protein-coding common_peak1_248_1950_0.223642322712605_11.0418192239653_5.83202772420494 chr10 115384911 115385992 + 5.83202772420494 NA exon (NM_001033261, exon 1 of 35) exon (NM_001033261, exon 1 of 35) 492 NM_001033261 216345 Mm.207621 NM_001033261 ENSMUSG00000034163 Zfc3h1 BC033596|Ccdc131|Psrc2 zinc finger, C3H1-type containing protein-coding common_peak1_107_1035_-0.341376098474248_9.84612023844943_5.83192440193562 chr10 128231421 128232700 + 5.83192440193562 NA promoter-TSS (NM_001164080) promoter-TSS (NM_001164080) -3 NM_001164080 21853 Mm.6458 NM_011589 ENSMUSG00000039994 Timeless C77407|Debt69|tim timeless circadian clock 1 protein-coding common_peak2_159_1077_0.296829698437339_10.2225563119712_5.82847801715977 chr4 132210816 132212849 + 5.82847801715977 NA intron (NM_145393, intron 1 of 4) CpG-10406 424 NM_145393 213541 Mm.23998 NM_145393 ENSMUSG00000040025 Ythdf2 9430020E02Rik|HGRG8|NY-REN-2 YTH domain family 2 protein-coding unique_peak2_37_132_0.771694079082057_7.44112947504222_5.82551990142781 chr2 178565118 178566436 + 5.82551990142781 NA Intergenic Intergenic 135262 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak2_94_523_0.415046788737762_9.24094639590633_5.82460020307768 chr1 36999602 37001209 + 5.82460020307768 NA Intergenic L1MDa|LINE|L1 -60878 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding common_peak1_29_276_-0.705085733451486_7.76119929932345_5.82428436049091 chr4 138464126 138464794 + 5.82428436049091 NA Intergenic MIRb|SINE|MIR 9312 NM_025451 66259 Mm.41603 NM_025451 ENSMUSG00000046447 Camk2n1 1810006K23Rik|AI848599|AI891706 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding common_peak2_29_276_-0.705085733451486_7.76119929932345_5.82428436049091 chrX 162828718 162830159 + 5.82428436049091 NA promoter-TSS (NM_178935) promoter-TSS (NM_178935) 16 NM_001290776 353170 Mm.270186 NM_178935 ENSMUSG00000038344 Txlng 4932441K18Rik|Fiat|Lrp taxilin gamma protein-coding common_peak1_102_983_-0.350966621562501_9.76703119455799_5.82298926689428 chr11 46304865 46306702 + 5.82298926689428 NA intron (NM_001252459, intron 1 of 30) B4|SINE|B4 6575 NM_001252460 76884 Mm.154358 NM_133769 ENSMUSG00000020340 Cyfip2 1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168 cytoplasmic FMR1 interacting protein 2 protein-coding common_peak2_264_2118_0.214679479949265_11.1565076123468_5.82288046242629 chr11 98794243 98797462 + 5.82288046242629 NA promoter-TSS (NM_028722) promoter-TSS (NM_028722) 83 NM_028722 74026 Mm.258352 NM_028722 ENSMUSG00000052915 Msl1 2810017F12Rik|4121402D02Rik|4930463F05Rik|AA682082|Msl-1 male-specific lethal 1 homolog (Drosophila) protein-coding common_peak2_61_572_-0.469096812836243_8.92784292233878_5.82263728197725 chr5 93109773 93111763 + 5.82263728197725 NA intron (NM_001310669, intron 1 of 10) intron (NM_001310669, intron 1 of 10) 17352 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_198_1447_0.257135906764212_10.6284138404653_5.81947369216649 chr1 24677694 24679381 + 5.81947369216649 NA promoter-TSS (NM_026719) promoter-TSS (NM_026719) -7 NM_026719 68421 Mm.336563 NM_026719 ENSMUSG00000073725 Lmbrd1 0910001K20Rik|AV347960 LMBR1 domain containing 1 protein-coding common_peak1_38_356_-0.606836814421238_8.17636185681848_5.81875048086498 chr8 71382053 71382673 + 5.81875048086498 NA promoter-TSS (NM_010150) promoter-TSS (NM_010150) -411 NM_010150 13864 Mm.28989 NM_010150 ENSMUSG00000002393 Nr2f6 AV090102|COUP-TF3|EAR2|Erbal2 nuclear receptor subfamily 2, group F, member 6 protein-coding common_peak2_28_267_-0.717425875945204_7.70737625248517_5.81757853414062 chr5 111508753 111509959 + 5.81757853414062 NA Intergenic Intergenic -72205 NR_015546 330164 Mm.193276 NM_177875 ENSMUSG00000052848 C130026L21Rik - RIKEN cDNA C130026L21 gene ncRNA common_peak1_19_43_1.23170260899348_6.07528292313404_5.81727015263238 chr1 153332728 153333122 + 5.81727015263238 NA promoter-TSS (NM_010683) promoter-TSS (NM_010683) -139 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding unique_peak1_19_43_1.23170260899348_6.07528292313404_5.81727015263238-2 chr3 32616509 32617042 + 5.81727015263238 NA promoter-TSS (NM_013531) promoter-TSS (NM_013531) -240 NM_013531 14696 Mm.139192 NM_013531 ENSMUSG00000027669 Gnb4 6720453A21Rik|G(beta)4 guanine nucleotide binding protein (G protein), beta 4 protein-coding unique_peak1_19_43_1.23170260899348_6.07528292313404_5.81727015263238 chr11 79670392 79670872 + 5.81727015263238 NA intron (NR_045898, intron 2 of 2) intron (NR_045898, intron 2 of 2) 4454 NR_045898 72218 Mm.443271 NR_045898 ENSMUSG00000086569 Rab11fip4os2 1700020F10Rik|4930542H20Rik|Rab11fib4os2 RAB11 family interacting protein 4 (class II), opposite strand 2 ncRNA common_peak1_19_43_1.23170260899348_6.07528292313404_5.81727015263238-2 chr10 41935846 41936231 + 5.81727015263238 NA intron (NM_001034858, intron 12 of 17) intron (NM_001034858, intron 12 of 17) 48599 NM_001013370 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding unique_peak1_19_43_1.23170260899348_6.07528292313404_5.81727015263238-3 chr9 72639898 72640327 + 5.81727015263238 NA Intergenic Intergenic -22235 NM_010890 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|Nedd4-1|Nedd4a|mKIAA0093 neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak1_67_323_0.516910880462259_8.59830544311575_5.81627990704437 chr11 80377378 80378577 + 5.81627990704437 NA promoter-TSS (NM_027472) promoter-TSS (NM_027472) 38 NM_027472 70591 Mm.86860 NM_027472 ENSMUSG00000057181 5730455P16Rik - RIKEN cDNA 5730455P16 gene protein-coding common_peak1_26_249_-0.743576717822492_7.59399592575084_5.81589700486794 chr14 70010139 70010830 + 5.81589700486794 NA intron (NM_028560, intron 4 of 6) intron (NM_028560, intron 4 of 6) -66961 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding unique_peak2_26_249_-0.743576717822492_7.59399592575084_5.81589700486794 chr19 12584413 12586018 + 5.81589700486794 NA TTS (NR_015503) TTS (NR_015503) 11351 NR_015503 74333 Mm.329744 NR_015503 ENSMUSG00000086213 A330040F15Rik - RIKEN cDNA A330040F15 gene ncRNA common_peak1_263_2108_0.214813501426256_11.1497501305068_5.81586161676507 chr7 130545979 130547589 + 5.81586161676507 NA intron (NM_001162855, intron 1 of 10) intron (NM_001162855, intron 1 of 10) 597 NM_001162855 67872 Mm.21714 NM_001162855 ENSMUSG00000040331 Nsmce4a 2410003A14Rik NSE4 homolog A, SMC5-SMC6 complex component protein-coding unique_peak2_34_320_-0.644983772598769_8.00393760082292_5.81567800992627 chr7 125471934 125473198 + 5.81567800992627 NA intron (NM_026330, intron 2 of 7) intron (NM_026330, intron 2 of 7) 18976 NM_026330 67711 Mm.4467 NM_026330 ENSMUSG00000030750 Nsmce1 2510027N19Rik NSE1 homolog, SMC5-SMC6 complex component protein-coding common_peak1_103_993_-0.348456174548643_9.78287395428796_5.81558962826645 chr11 101641044 101641904 + 5.81558962826645 NA Intergenic CpG 13525 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding unique_peak2_27_258_-0.730243537668629_7.65168651885224_5.8146284583095 chr4 6816719 6818636 + 5.8146284583095 NA intron (NM_145711, intron 3 of 8) intron (NM_145711, intron 3 of 8) 173046 NM_145711 252838 Mm.435828 NM_145711 ENSMUSG00000041272 Tox 1700007F02Rik thymocyte selection-associated high mobility group box protein-coding common_peak1_234_2463_-0.215549866390566_11.1590116074996_5.8132279846467 chr1 53783936 53785285 + 5.8132279846467 NA intron (NM_133810, intron 1 of 7) intron (NM_133810, intron 1 of 7) 605 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak2_93_890_-0.369538222909547_9.61451251006715_5.81320427944471 chr12 99883512 99885206 + 5.81320427944471 NA promoter-TSS (NM_028354) promoter-TSS (NM_028354) -156 NM_028354 104884 Mm.312323 NM_028354 ENSMUSG00000021177 Tdp1 2810481F14Rik|4921509N21Rik|AI838772|AW493413|E430034L06Rik|MLZ-501|SCAN1 tyrosyl-DNA phosphodiesterase 1 protein-coding common_peak1_98_941_-0.35812878579862_9.70051885671347_5.81308464325237 chr9 21449509 21451275 + 5.81308464325237 NA intron (NM_007871, intron 1 of 19) intron (NM_007871, intron 1 of 19) 25484 NM_001039520 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding common_peak2_55_514_-0.495251560866299_8.76080284163743_5.81211368464298 chr1 179828347 179830211 + 5.81211368464298 NA Intergenic Intergenic -25264 NM_026375 226747 Mm.128165 NM_026375 ENSMUSG00000026491 Ahctf1 6230412P20Rik|AV011447|Elys AT hook containing transcription factor 1 protein-coding common_peak2_73_365_0.490696124113724_8.76104790034091_5.81211368464298 chr7 80197907 80199303 + 5.81211368464298 NA 5' UTR (NM_013659, exon 2 of 15) 5' UTR (NM_013659, exon 2 of 15) 11764 NM_013659 20352 Mm.275909 NM_013659 ENSMUSG00000030539 Sema4b SemC|Semac|mKIAA1745 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B protein-coding common_peak2_59_553_-0.478473422265129_8.87450545491662_5.81134456145543 chr13 100730032 100731551 + 5.81134456145543 NA exon (NM_009874, exon 1 of 12) exon (NM_009874, exon 1 of 12) 151 NM_009874 12572 Mm.259718 NM_009874 ENSMUSG00000069089 Cdk7 AI323415|AI528512|C230069N13|Cdkn7|Crk4 cyclin-dependent kinase 7 protein-coding common_peak2_377_4254_-0.162587429281905_11.9736497019324_5.81088051530787 chr15 12203816 12208292 + 5.81088051530787 NA intron (NM_172958, intron 1 of 15) intron (NM_172958, intron 1 of 15) 960 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak1_95_531_0.411717654963619_9.261141262983_5.81058316201106 chr3 87842322 87844161 + 5.81058316201106 NA Intergenic B1_Mur3|SINE|Alu -3514 NM_001025571 27371 Mm.86361 NM_021309 ENSMUSG00000028071 Sh2d2a Lad|Ribp|Tsad SH2 domain containing 2A protein-coding common_peak2_151_1508_-0.279175953570725_10.4197891137413_5.80887609853521 chr2 156195849 156197759 + 5.80887609853521 NA intron (NM_172674, intron 1 of 17) CpG 157 NM_172674 228829 Mm.427078 NM_172674 ENSMUSG00000038116 Phf20 6820402O20Rik PHD finger protein 20 protein-coding common_peak2_113_676_0.368099007161534_9.58706152715576_5.80834968989668 chr16 42906450 42909502 + 5.80834968989668 NA intron (NM_001285805, intron 1 of 10) intron (NM_001285805, intron 1 of 10) 331 NM_001285805 56490 Mm.136238 NM_019778 ENSMUSG00000022708 Zbtb20 1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|ODA-8S|Oda8|Zfp288 zinc finger and BTB domain containing 20 protein-coding common_peak1_22_215_-0.816426698069958_7.34667415312849_5.80792142514329 chr13 101710816 101711341 + 5.80792142514329 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) -18448 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_22_215_-0.816426698069958_7.34667415312849_5.80792142514329 chr17 56658870 56659845 + 5.80792142514329 NA intron (NM_175350, intron 16 of 21) intron (NM_175350, intron 16 of 21) -13868 NM_001252466 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding common_peak1_22_215_-0.816426698069958_7.34667415312849_5.80792142514329-2 chrX 164014602 164015027 + 5.80792142514329 NA exon (NM_181315, exon 2 of 8) exon (NM_181315, exon 2 of 8) 13196 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak1_237_1837_0.229763630136963_10.9588028663575_5.80756316013363 chr10 122678526 122680973 + 5.80756316013363 NA TTS (NR_106182) TTS (NR_106182) 434 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak1_60_275_0.555994994268804_8.38652195391257_5.80733426589165 chr11 68204412 68205639 + 5.80733426589165 NA 3' UTR (NM_018768, exon 8 of 8) 3' UTR (NM_018768, exon 8 of 8) -15867 NR_105833 102465219 NR_105833 ENSMUSG00000099174 Mir6406 Gm27981|mmu-mir-6406 microRNA 6406 ncRNA unique_peak2_17_172_-0.929942865764057_6.9696567947547_5.80721657180256 chr2 166412042 166413138 + 5.80721657180256 NA Intergenic Intergenic -34861 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak2_129_1268_-0.305949522321853_10.1565015926802_5.80665585569253 chr7 4865421 4867188 + 5.80665585569253 NA promoter-TSS (NM_026158) promoter-TSS (NM_026158) -125 NM_026158 67441 Mm.41385 NM_026158 ENSMUSG00000052605 Isoc2b 0610042E07Rik|AI553388|Isoc2 isochorismatase domain containing 2b protein-coding common_peak2_32_105_0.849399493097681_7.15262020111204_5.80581178541607 chr17 22423841 22424621 + 5.80581178541607 NA promoter-TSS (NM_198003) promoter-TSS (NM_198003) -37 NM_198003 74149 Mm.30767 NM_198003 ENSMUSG00000071266 Zfp946 1300003B13Rik zinc finger protein 946 protein-coding common_peak2_177_1245_0.276542326926542_10.4213595164873_5.80486388199599 chr14 64649899 64654385 + 5.80486388199599 NA promoter-TSS (NM_001081177) promoter-TSS (NM_001081177) -389 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak2_56_248_0.584496787482093_8.25225032580913_5.80218470288213-2 chr7 80936032 80937721 + 5.80218470288213 NA intron (NM_019951, intron 1 of 5) intron (NM_019951, intron 1 of 5) 10674 NM_019951 56529 Mm.43760 NM_019951 ENSMUSG00000025724 Sec11a 1810012E07Rik|18kDa|Sec11l1|Sid2895p|Spc18|sid2895 SEC11 homolog A, signal peptidase complex subunit protein-coding common_peak2_56_248_0.584496787482093_8.25225032580913_5.80218470288213 chr18 32559155 32560208 + 5.80218470288213 NA intron (NM_001048207, intron 1 of 2) CpG 353 NM_001048207 71683 Mm.292145 NM_027863 ENSMUSG00000090523 Gypc 0610037F22Rik|Cd236r glycophorin C protein-coding common_peak2_41_384_-0.584627680597409_8.29640079528356_5.80126314798855 chr14 30619561 30621201 + 5.80126314798855 NA intron (NM_011103, intron 1 of 17) intron (NM_011103, intron 1 of 17) 5827 NM_011103 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding unique_peak1_15_28_1.4382722679976_5.57711712912637_5.80014040891957 chr1 52496568 52497034 + 5.80014040891957 NA intron (NM_008667, intron 1 of 7) intron (NM_008667, intron 1 of 7) 3647 NM_008667 17936 Mm.25903 NM_008667 ENSMUSG00000002881 Nab1 - Ngfi-A binding protein 1 protein-coding common_peak1_54_235_0.598647969024074_8.18196703387388_5.79983783468335 chr18 32559277 32560065 + 5.79983783468335 NA intron (NM_001048207, intron 1 of 2) CpG 363 NM_001048207 71683 Mm.292145 NM_027863 ENSMUSG00000090523 Gypc 0610037F22Rik|Cd236r glycophorin C protein-coding common_peak2_206_2132_-0.231938413940494_10.9426990433703_5.79917257048711 chr4 40837156 40841591 + 5.79917257048711 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) 10765 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA common_peak2_133_1310_-0.299295958885676_10.2068039907789_5.79891612968285 chr15 58033136 58035049 + 5.79891612968285 NA exon (NM_029418, exon 1 of 6) exon (NM_029418, exon 1 of 6) 202 NM_029418 75758 Mm.455792 NM_029418 ENSMUSG00000101892 9130401M01Rik AI849328 RIKEN cDNA 9130401M01 gene protein-coding common_peak2_374_3341_0.1717592771068_11.7923756566146_5.79794240424688 chr10 12809736 12814793 + 5.79794240424688 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 49471 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_62_581_-0.463266182956501_8.95324225143003_5.79746705176598 chr11 115277291 115278036 + 5.79746705176598 NA promoter-TSS (NM_007997) promoter-TSS (NM_007997) -694 NM_007997 14149 Mm.4719 NM_007997 ENSMUSG00000018861 Fdxr - ferredoxin reductase protein-coding common_peak1_202_1486_0.254010491725619_10.6651941779152_5.79639413399279 chr19 24476590 24478260 + 5.79639413399279 NA promoter-TSS (NM_026520) promoter-TSS (NM_026520) 49 NM_026520 68034 Mm.440181 NM_026520 ENSMUSG00000074922 Fam122a 2410124L17Rik|2900009I07Rik|ENSMUSG00000051082|Gm9849 family with sequence similarity 122, member A protein-coding common_peak2_50_210_0.626571588420271_8.03438498291732_5.79576991250432 chr5 148780472 148782125 + 5.79576991250432 NA intron (NR_131106, intron 2 of 2) RMER17A2|LTR|ERVK 3335 NR_131106 78015 Mm.243839 NR_131106 ENSMUSG00000085740 4930505K14Rik - RIKEN cDNA 4930505K14 gene ncRNA common_peak1_121_1182_-0.31710259610646_10.0496830602866_5.79395189627926 chr8 11757727 11758845 + 5.79395189627926 NA promoter-TSS (NM_001113518) promoter-TSS (NM_001113518) -44 NM_017402 54126 Mm.244068 NM_017402 ENSMUSG00000031511 Arhgef7 Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR Rho guanine nucleotide exchange factor (GEF7) protein-coding common_peak1_25_241_-0.763441992633663_7.53714224095776_5.79251879154802 chr11 114965720 114966152 + 5.79251879154802 NA Intergenic Intergenic -5519 NM_199225 387565 Mm.351450 NM_199225 ENSMUSG00000058728 Cd300c Clm6 CD300C molecule protein-coding unique_peak1_13_21_1.60052082019427_5.25969202873443_5.79081143524713-2 chr5 29842795 29843221 + 5.79081143524713 NA intron (NR_105781, intron 1 of 2) intron (NR_105781, intron 1 of 2) 53997 NR_105781 102465962 NR_105781 ENSMUSG00000098448 Mir6362 Gm27812|mmu-mir-6362 microRNA 6362 ncRNA unique_peak1_13_21_1.60052082019427_5.25969202873443_5.79081143524713 chr11 62006308 62006665 + 5.79081143524713 NA intron (NM_001310526, intron 1 of 7) intron (NM_001310526, intron 1 of 7) 49723 NM_001310526 432572 Mm.438022 NM_001029936 ENSMUSG00000042331 Specc1 2810012G08Rik|B230396K10Rik|Cytsb sperm antigen with calponin homology and coiled-coil domains 1 protein-coding unique_peak1_13_21_1.60052082019427_5.25969202873443_5.79081143524713-3 chr9 99124541 99124937 + 5.79081143524713 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 15472 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak2_276_2971_-0.194998351491066_11.4397192247931_5.7904257311574 chr7 126501201 126504367 + 5.7904257311574 NA intron (NM_183020, intron 1 of 22) CpG 518 NM_183020 233871 Mm.231450 NM_183020 ENSMUSG00000032637 Atxn2l A2D|A2LG|A2RP|A2lp|Atxnl2 ataxin 2-like protein-coding common_peak1_73_688_-0.421964210306525_9.21737806755103_5.78980331797434 chr6 54925966 54926971 + 5.78980331797434 NA intron (NM_172729, intron 11 of 11) intron (NM_172729, intron 11 of 11) 45193 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_80_417_0.458982950911995_8.93685060753688_5.78895253798274 chr9 19575132 19575594 + 5.78895253798274 NA Intergenic L1_Mus3|LINE|L1 -7981 NM_146522 258515 Mm.377546 NM_146522 ENSMUSG00000095667 Olfr854 MOR147-3 olfactory receptor 854 protein-coding common_peak1_136_1343_-0.295979866243901_10.2443274896568_5.78854121000437 chr10 61326849 61328464 + 5.78854121000437 NA intron (NM_013753, intron 18 of 19) intron (NM_013753, intron 18 of 19) 29820 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak1_116_701_0.361750745456584_9.63620259303285_5.78830416879091 chr1 165193601 165194825 + 5.78830416879091 NA intron (NM_145512, intron 1 of 7) CpG 220 NM_145512 108735 Mm.288369 NM_145512 ENSMUSG00000040848 Sft2d2 2010005O13Rik|AI506168|AW561909|cI-45 SFT2 domain containing 2 protein-coding common_peak1_48_448_-0.533695397830462_8.54372393582592_5.78718419965802 chr6 128731308 128732139 + 5.78718419965802 NA Intergenic ORR1E|LTR|ERVL-MaLR -8677 NM_001099918 100043861 Mm.66911 NM_001099918 ENSMUSG00000079299 Klrb1 4930431A04Rik|Gm4696|Klrb1g|Klrb6|Ly-55|Ly55|NKR-P1G|Nkrp-1e|Nkrp1g killer cell lectin-like receptor subfamily B member 1 protein-coding common_peak2_71_351_0.498478365608083_8.70867080144134_5.78670668499697 chr19 46470215 46472088 + 5.78670668499697 NA intron (NM_015752, intron 8 of 11) intron (NM_015752, intron 8 of 11) -30497 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_187_1341_0.266186753598548_10.5232623329995_5.7855875077637 chr16 93832202 93833333 + 5.7855875077637 NA intron (NM_001045529, intron 1 of 16) intron (NM_001045529, intron 1 of 16) 646 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak1_137_1354_-0.294869504808084_10.2566423838372_5.78555590695132 chr18 65382037 65383510 + 5.78555590695132 NA intron (NM_001037294, intron 1 of 12) intron (NM_001037294, intron 1 of 12) 11115 NM_001037294 225638 Mm.296528 NM_001037294 ENSMUSG00000032845 Alpk2 Gm549|Hak alpha-kinase 2 protein-coding common_peak1_18_180_-0.899481683686315_7.05010504524005_5.78535190615538 chr10 79908168 79908605 + 5.78535190615538 NA intron (NM_198107, intron 1 of 14) intron (NM_198107, intron 1 of 14) 552 NM_001163276 216154 Mm.260089 NM_198107 ENSMUSG00000013833 Med16 95kDa|A630083L04|Thrap5|Trap95 mediator complex subunit 16 protein-coding common_peak1_18_180_-0.899481683686315_7.05010504524005_5.78535190615538-2 chr8 119840746 119841231 + 5.78535190615538 NA promoter-TSS (NM_028071) promoter-TSS (NM_028071) -409 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak2_386_3481_0.168295714909416_11.8498483451058_5.78493234608238 chr14 55559102 55561546 + 5.78493234608238 NA promoter-TSS (NM_001199009) promoter-TSS (NM_001199009) 295 NM_133734 28199 Mm.11535 NM_133734 ENSMUSG00000022214 Dcaf11 0710008A13Rik|C76035|D14Ucla1|Dacf11|GLO14|Wdr23 DDB1 and CUL4 associated factor 11 protein-coding common_peak1_199_1457_0.256077121368516_10.6378135650112_5.78487037935411 chr7 128128288 128130698 + 5.78487037935411 NA promoter-TSS (NM_021334) promoter-TSS (NM_021334) -75 NM_021334 16411 Mm.22378 NM_021334 ENSMUSG00000030789 Itgax AI449405|Cd11c|Cr4|N418 integrin alpha X protein-coding common_peak2_479_5616_-0.140478410235483_12.3853448824609_5.78457149752581 chr1 156034367 156038451 + 5.78457149752581 NA promoter-TSS (NM_144791) promoter-TSS (NM_144791) 71 NM_144791 208263 Mm.211654 NM_144791 ENSMUSG00000026466 Tor1aip1 LAP1|Lap1B torsin A interacting protein 1 protein-coding common_peak1_40_374_-0.589303520317817_8.25609502522433_5.78428087547968 chr1 191989646 191990359 + 5.78428087547968 NA Intergenic Intergenic 8632 NR_039566 100628582 NR_039566 ENSMUSG00000093003 Mir3473c mmu-mir-3473c microRNA 3473c ncRNA common_peak2_40_374_-0.589303520317817_8.25609502522433_5.78428087547968 chr12 84772157 84773210 + 5.78428087547968 NA promoter-TSS (NM_028863) promoter-TSS (NM_028863) 429 NM_023409 67963 Mm.282556 NM_023409 ENSMUSG00000021242 Npc2 2700012J19Rik|AA408070|AU045843|HE1 Niemann-Pick type C2 protein-coding common_peak2_40_374_-0.589303520317817_8.25609502522433_5.78428087547968-2 chr7 19119771 19120502 + 5.78428087547968 NA intron (NM_175530, intron 1 of 1) intron (NM_175530, intron 1 of 1) 277 NM_175530 243867 Mm.230830 NM_175530 ENSMUSG00000050428 Fbxo46 20D7-FC4|4932704E22Rik|Fbxo34l F-box protein 46 protein-coding common_peak1_60_562_-0.472471661033257_8.9007552815636_5.78409890602584 chr1 135594442 135595760 + 5.78409890602584 NA Intergenic B4|SINE|B4 -9746 NM_173437 215690 Mm.34977 NM_173437 ENSMUSG00000009418 Nav1 9530089B19|9930003A20Rik|C230080M11Rik|Pomfil3|Unc53h1|mKIAA1151|steerin-1 neuron navigator 1 protein-coding common_peak2_107_1034_-0.339982863174381_9.8454236207995_5.78392213955642 chr14 64626109 64629412 + 5.78392213955642 NA Intergenic RSINE1|SINE|B4 -24771 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak1_36_127_0.77978365121141_7.38989182560571_5.78017308092409 chr7 131410651 131411042 + 5.78017308092409 NA promoter-TSS (NM_175115) promoter-TSS (NM_175115) 245 NM_025826 66885 Mm.334274 NM_025826 ENSMUSG00000030861 Acadsb 1300003O09Rik|2-MEBCAD|BB066609|SBCAD acyl-Coenzyme A dehydrogenase, short/branched chain protein-coding unique_peak2_43_402_-0.56822597464766_8.37052304120414_5.78009204564092 chr13 93093168 93095232 + 5.78009204564092 NA promoter-TSS (NR_046182) promoter-TSS (NR_046182) -633 NR_046182 408254 Mm.474857 NR_046182 A630019I02Rik - RIKEN cDNA A630019I02 gene ncRNA common_peak1_43_402_-0.56822597464766_8.37052304120414_5.78009204564092 chr9 22156789 22157395 + 5.78009204564092 NA intron (NM_001082532, intron 1 of 1) CpG 246 NM_001082532 66268 Mm.28924 NM_025457 ENSMUSG00000010607 Pigyl 1810008A14Rik|PIG-Y|Pigy phosphatidylinositol glycan anchor biosynthesis, class Y-like protein-coding common_peak1_142_1408_-0.288265549727209_10.316323121446_5.77820093470669 chr14 19985328 19987163 + 5.77820093470669 NA Intergenic Intergenic -8996 NM_001285909 14702 Mm.41737 NM_010315 ENSMUSG00000043004 Gng2 - guanine nucleotide binding protein (G protein), gamma 2 protein-coding common_peak1_151_1006_0.304353168949174_10.1280245524814_5.77797625465454 chr3 93595705 93597316 + 5.77797625465454 NA Intergenic Intergenic 41393 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak2_153_1024_0.301925657566613_10.1523710231761_5.77774310540941 chr14 47472331 47473666 + 5.77774310540941 NA intron (NM_030236, intron 1 of 1) CpG 437 NM_001146085 78938 Mm.11935 NM_030236 ENSMUSG00000037536 Fbxo34 2900057B08Rik|5830426G16Rik F-box protein 34 protein-coding common_peak1_31_100_0.864654091559729_7.09053852853166_5.77761962463061 chr10 8121632 8122274 + 5.77761962463061 NA Intergenic RMER30|DNA|hAT-Charlie -165830 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak2_103_595_0.389477346551482_9.4139071937379_5.77739105025873 chr7 75371013 75373228 + 5.77739105025873 NA Intergenic Intergenic -62858 NM_153579 64176 Mm.273082 NM_153579 ENSMUSG00000053025 Sv2b A830038F04Rik|AI850768|mKIAA0735 synaptic vesicle glycoprotein 2 b protein-coding common_peak1_42_161_0.705877167369326_7.69278858656929_5.77588561623677 chr18 32406562 32407279 + 5.77588561623677 NA intron (NM_001083334, intron 2 of 14) intron (NM_001083334, intron 2 of 14) -28636 NR_045403 402767 Mm.385109 NR_045403 ENSMUSG00000097413 A830052D11Rik - RIKEN cDNA A830052D11 gene ncRNA common_peak1_42_161_0.705877167369326_7.69278858656929_5.77588561623677-2 chr8 122319042 122319982 + 5.77588561623677 NA intron (NM_009569, intron 3 of 9) intron (NM_009569, intron 3 of 9) 37371 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_334_2884_0.1842936834952_11.5865024452804_5.77523899797907 chr8 123372804 123374950 + 5.77523899797907 NA exon (NM_001286362, exon 1 of 17) exon (NM_001286362, exon 1 of 17) 166 NM_001286363 66855 Mm.178818 NM_025804 ENSMUSG00000001472 Tcf25 1100001J13Rik|1810041K11Rik|D8Ertd325e|Nulp1|mKIAA1049 transcription factor 25 (basic helix-loop-helix) protein-coding common_peak2_118_718_0.357224409800347_9.66846016533947_5.77475836415013 chr1 43826942 43828656 + 5.77475836415013 NA promoter-TSS (NM_026430) promoter-TSS (NM_026430) -91 NM_026430 67883 Mm.387202 NM_026430 ENSMUSG00000057363 Uxs1 1600025I13Rik|AI451869|AI649125|AW550562 UDP-glucuronate decarboxylase 1 protein-coding unique_peak2_32_302_-0.665854035812072_7.91024696556692_5.77475657170783 chr3 38496341 38497939 + 5.77475657170783 NA Intergenic Intergenic -12324 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding common_peak2_32_302_-0.665854035812072_7.91024696556692_5.77475657170783-2 chr7 125606546 125608298 + 5.77475657170783 NA intron (NM_021887, intron 1 of 8) intron (NM_021887, intron 1 of 8) 3993 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak2_32_302_-0.665854035812072_7.91024696556692_5.77475657170783 chr14 73509872 73510683 + 5.77475657170783 NA intron (NM_026119, intron 1 of 6) CpG 228 NM_026119 67381 Mm.282888 NM_026119 ENSMUSG00000022109 Med4 2410046H15Rik|DRIP36|HSPC126|TRAP36|Vdirp|Vdrip mediator complex subunit 4 protein-coding common_peak1_32_302_-0.665854035812072_7.91024696556692_5.77475657170783 chr9 63782092 63782772 + 5.77475657170783 NA Intergenic LTR16C|LTR|ERVL -24438 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_50_467_-0.522693942455948_8.60901774835543_5.77409986086387 chr5 138154879 138156146 + 5.77409986086387 NA intron (NM_019747, intron 1 of 4) CpG 232 NM_019747 56314 Mm.19274 NM_019747 ENSMUSG00000037007 Zfp113 4732456B05Rik|mKIAA4229 zinc finger protein 113 protein-coding common_peak1_58_543_-0.481936436208514_8.84649462314608_5.77394654175251 chr11 116394543 116395330 + 5.77394654175251 NA intron (NM_027258, intron 2 of 18) intron (NM_027258, intron 2 of 18) 18096 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak2_92_879_-0.37054299263707_9.59608821720613_5.77285420096668 chr11 3334381 3336626 + 5.77285420096668 NA intron (NM_178149, intron 5 of 5) intron (NM_178149, intron 5 of 5) 4772 NM_178149 216505 Mm.390323 NM_178149 ENSMUSG00000034614 Pik3ip1 1500004A08Rik|5830455E04Rik|Crkd|Hgfl phosphoinositide-3-kinase interacting protein 1 protein-coding common_peak2_159_1595_-0.2692737750325_10.5056080487061_5.77225273823872 chr5 145200799 145202231 + 5.77225273823872 NA exon (NM_023322, exon 1 of 3) exon (NM_023322, exon 1 of 3) 367 NM_023322 67235 Mm.432480 NM_023322 ENSMUSG00000029627 Zkscan14 2310046C23Rik|2810437E14Rik|Zfp99|Znf394 zinc finger with KRAB and SCAN domains 14 protein-coding unique_peak2_19_188_-0.871108196590296_7.12668832592592_5.77180874518798 chr9 108202364 108203304 + 5.77180874518798 NA Intergenic ID_B1|SINE|B4 -12451 NM_007567 12217 Mm.20425 NM_007567 ENSMUSG00000032589 Bsn - bassoon protein-coding common_peak2_157_1573_-0.271508423207814_10.4844656139036_5.77060472915554 chrX 12078281 12081391 + 5.77060472915554 NA 5' UTR (NM_029510, exon 1 of 15) 5' UTR (NM_029510, exon 1 of 15) 717 NM_175045 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak2_61_282_0.54863627308878_8.41897637937627_5.77026597895556 chr6 116628193 116629443 + 5.77026597895556 NA promoter-TSS (NM_001302440) promoter-TSS (NM_001302440) 110 NM_001302439 67255 Mm.18810 NM_026057 ENSMUSG00000059878 Zfp422 2900028O21Rik|AU041373|KOX15|Krox-25-2|Krox-26|Krox25|Krox26|Znf22 zinc finger protein 422 protein-coding common_peak1_197_2027_-0.237775162002821_10.8669543560019_5.76910300785498 chr11 90249410 90250969 + 5.76910300785498 NA intron (NM_026178, intron 1 of 6) intron (NM_026178, intron 1 of 6) 713 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak1_249_1962_0.22188863273489_11.0497887738336_5.76851775222806 chr1 10037402 10039153 + 5.76851775222806 NA promoter-TSS (NM_026493) promoter-TSS (NM_026493) 59 NM_026493 211660 Mm.244046 NM_026493 ENSMUSG00000056763 Cspp1 2310020J12Rik|4930413O22Rik|AA387550|BC055915|Cspp2|Cspp3 centrosome and spindle pole associated protein 1 protein-coding common_peak2_45_420_-0.55260330778653_8.44137476917313_5.76651770546483 chr10 95564353 95565896 + 5.76651770546483 NA promoter-TSS (NM_027722) promoter-TSS (NM_027722) -957 NM_027722 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak1_45_420_-0.55260330778653_8.44137476917313_5.76651770546483 chr16 87713102 87713989 + 5.76651770546483 NA intron (NM_007520, intron 1 of 4) intron (NM_007520, intron 1 of 4) 14591 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak1_194_1409_0.259569589200025_10.5912642418862_5.76628545303346 chr17 78735971 78737592 + 5.76628545303346 NA promoter-TSS (NM_011500) promoter-TSS (NM_011500) -221 NM_011500 268980 Mm.311915 NM_011500 ENSMUSG00000024077 Strn AU022939|D130055P19 striatin, calmodulin binding protein protein-coding common_peak1_89_485_0.427978445145207_9.13880172617838_5.76626395701224 chr3 135211906 135213276 + 5.76626395701224 NA promoter-TSS (NM_173762) promoter-TSS (NM_173762) 28 NM_173762 229841 Mm.161470 NM_173762 ENSMUSG00000045328 Cenpe 312kDa|AU019344|BC049989|C530022J18|CENP-E|Kif10 centromere protein E protein-coding common_peak1_39_144_0.737837448802198_7.54882781441603_5.76342614764354 chr15 60166962 60167735 + 5.76342614764354 NA Intergenic L1VL2|LINE|L1 -150730 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_110_1065_-0.334073555394481_9.89095494506194_5.76283815853138 chr7 47014989 47015975 + 5.76283815853138 NA Intergenic B4|SINE|B4 -7068 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding common_peak1_221_1676_0.238863504986705_10.8310987260577_5.76176021002079 chr8 46858124 46860672 + 5.76176021002079 NA Intergenic Intergenic 119653 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_36_338_-0.625357811924934_8.09246255717388_5.76071904372938 chr11 83543737 83544566 + 5.76071904372938 NA Intergenic Intergenic -13633 NM_013653 20304 Mm.284248 NM_013653 ENSMUSG00000035042 Ccl5 MuRantes|RANTES|SISd|Scya5|TCP228 chemokine (C-C motif) ligand 5 protein-coding common_peak2_36_338_-0.625357811924934_8.09246255717388_5.76071904372938 chr11 59424933 59426676 + 5.76071904372938 NA intron (NM_144521, intron 3 of 4) intron (NM_144521, intron 3 of 4) 24152 NM_144521 67826 Mm.26680 NM_144521 ENSMUSG00000009894 Snap47 1110031B06Rik|SNAP-47 synaptosomal-associated protein, 47 protein-coding common_peak1_47_438_-0.537689350256906_8.50923245440691_5.75951135994272 chr10 39369002 39369688 + 5.75951135994272 NA promoter-TSS (NM_001122892) promoter-TSS (NM_001122892) -454 NM_001122892 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak2_15_155_-0.989148955737081_6.79082774099371_5.75949177540217 chr15 66792615 66793925 + 5.75949177540217 NA intron (NM_001029841, intron 3 of 7) intron (NM_001029841, intron 3 of 7) 38559 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_15_155_-0.989148955737081_6.79082774099371_5.75949177540217 chr12 107992902 107993300 + 5.75949177540217 NA intron (NM_001079883, intron 1 of 3) intron (NM_001079883, intron 1 of 3) 10313 NM_001079883 58208 Mm.392694 NM_021399 ENSMUSG00000048251 Bcl11b 9130430L19Rik|AI604821|B630002E05Rik|BCL-11B|Ctip2|Rit1 B cell leukemia/lymphoma 11B protein-coding common_peak2_131_1288_-0.301491978328061_10.1812905591976_5.75942558010951 chr10 121364304 121367289 + 5.75942558010951 NA intron (NM_029364, intron 1 of 13) intron (NM_029364, intron 1 of 13) 706 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding common_peak2_192_1390_0.26089858790402_10.5723559984942_5.75878782127633 chr15 79689622 79692151 + 5.75878782127633 NA promoter-TSS (NM_013818) promoter-TSS (NM_013818) -10 NM_013818 14904 Mm.19080 NM_013818 ENSMUSG00000042535 Gtpbp1 AL022987|AW045683|C85212|GP-1|Gtpbp GTP binding protein 1 protein-coding common_peak1_134_855_0.328846167316769_9.90589007005953_5.75844240522755 chr5 110779795 110781303 + 5.75844240522755 NA promoter-TSS (NM_019700) promoter-TSS (NM_019700) 47 NM_019700 56361 Mm.23528 NM_019700 ENSMUSG00000029507 Pus1 A730013B20Rik|MPUS1|mPus1p pseudouridine synthase 1 protein-coding common_peak1_31_293_-0.67680677052484_7.86126895957394_5.75776332275739 chr14 22019662 22020267 + 5.75776332275739 NA intron (NM_028275, intron 1 of 6) intron (NM_028275, intron 1 of 6) 252 NM_028275 76633 Mm.489898 NM_028275 ENSMUSG00000063458 1700112E06Rik 2700009F18Rik RIKEN cDNA 1700112E06 gene protein-coding common_peak1_57_255_0.575275625698925_8.28763781284946_5.75754342863417 chr15 5554558 5555954 + 5.75754342863417 NA intron (NR_045274, intron 2 of 4) intron (NR_045274, intron 2 of 4) 58938 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA unique_peak2_5_72_-1.62927371316063_5.3751877022997_5.7548807517375 chrX 48127460 48128202 + 5.7548807517375 NA intron (NM_001289729, intron 14 of 20) intron (NM_001289729, intron 14 of 20) -18605 NM_001313749 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding common_peak2_135_864_0.326816872009154_9.91996475852866_5.75435653651787 chr12 86817997 86820803 + 5.75435653651787 NA Intergenic ORR1C1|LTR|ERVL-MaLR 65414 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_30_95_0.88171970401315_7.02582235272773_5.7534575674451 chr14 89898363 89899038 + 5.7534575674451 NA non-coding (NR_002862, exon 1 of 1) non-coding (NR_002862, exon 1 of 1) 2476 NR_002862 328451 Mm.320571 NR_002862 Gm5088 EG328451|Pabpc4l poly(A)-binding protein, cytoplasmic pseudogene pseudo common_peak2_30_95_0.88171970401315_7.02582235272773_5.7534575674451 chr7 100465395 100466239 + 5.7534575674451 NA intron (NM_001017985, intron 32 of 32) intron (NM_001017985, intron 32 of 32) -7174 NM_009464 22229 Mm.6254 NM_009464 ENSMUSG00000032942 Ucp3 AI645527|Slc25a9|UCP-3 uncoupling protein 3 (mitochondrial, proton carrier) protein-coding common_peak2_220_2295_-0.222365750626683_11.0537240513623_5.75309687526268 chr19 47729739 47732687 + 5.75309687526268 NA promoter-TSS (NM_026377) promoter-TSS (NM_026377) -543 NM_026377 67788 Mm.181610 NM_026377 ENSMUSG00000025066 Sfr1 6330577E15Rik|Meir5 SWI5 dependent recombination repair 1 protein-coding unique_peak2_13_138_-1.05898863389194_6.58944675577754_5.75296329467648 chr9 21374094 21375199 + 5.75296329467648 NA intron (NM_001277322, intron 2 of 21) B2_Mm2|SINE|B2 6114 NM_001277322 16201 Mm.440026 NM_010561 ENSMUSG00000032178 Ilf3 MBII-26|MPHOSPH4|NF90|NFAR interleukin enhancer binding factor 3 protein-coding common_peak2_264_2823_-0.199677020949746_11.3636858627963_5.75236599795054 chr3 89227113 89234708 + 5.75236599795054 NA exon (NM_013605, exon 2 of 7) exon (NM_013605, exon 2 of 7) 1854 NM_013605 17829 Mm.16193 NM_013605 ENSMUSG00000042784 Muc1 CD227|EMA|Muc-1 mucin 1, transmembrane protein-coding common_peak1_72_359_0.490465930055954_8.73708606135765_5.75211184849858 chr10 41594813 41595776 + 5.75211184849858 NA intron (NM_001303469, intron 3 of 20) intron (NM_001303469, intron 3 of 20) 11301 NM_001303469 75973 Mm.228517 NM_029493 ENSMUSG00000075225 Ccdc162 5033413D22Rik|Ccdc162p|Gm29096|Gm61|Gm6976 coiled-coil domain containing 162 protein-coding common_peak1_234_2461_-0.214378372180121_11.1584258603944_5.75108113103996 chr15 81810263 81812172 + 5.75108113103996 NA promoter-TSS (NM_017376) promoter-TSS (NM_017376) -197 NM_017376 21685 Mm.270278 NM_017376 ENSMUSG00000022389 Tef 2310028D20Rik thyrotroph embryonic factor protein-coding common_peak2_55_242_0.5883645575985_8.21899478240503_5.75091597489687 chr2 131253145 131254723 + 5.75091597489687 NA intron (NR_037281, intron 2 of 2) intron (NR_037281, intron 2 of 2) -8566 NM_153501 74450 Mm.101264 NM_153501 ENSMUSG00000037514 Pank2 4933409I19Rik|AI642621 pantothenate kinase 2 protein-coding common_peak1_44_173_0.683235141715904_7.78456106670668_5.74956405565387 chr18 35498476 35498977 + 5.74956405565387 NA intron (NM_030749, intron 1 of 9) CpG 199 NM_030749 81500 Mm.291482 NM_030749 ENSMUSG00000024357 Sil1 1810057E01Rik|AI042831|wz endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae) protein-coding common_peak1_57_532_-0.482716097060251_8.81663367422905_5.74900026144065 chr6 126939608 126940429 + 5.74900026144065 NA promoter-TSS (NM_009013) promoter-TSS (NM_009013) 52 NM_138594 28040 Mm.44228 NM_138594 ENSMUSG00000030347 D6Wsu163e C12orf4 DNA segment, Chr 6, Wayne State University 163, expressed protein-coding common_peak1_246_2605_-0.208252250096411_11.2434952435199_5.74672438782167 chr16 93815572 93817462 + 5.74672438782167 NA Intergenic Intergenic -15604 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak2_239_1860_0.226631026097621_10.975177853108_5.74470301080201 chr15 11994405 11996328 + 5.74470301080201 NA intron (NM_011294, intron 1 of 4) CpG 641 NM_011294 20024 Mm.41746 NM_011294 ENSMUSG00000022205 Sub1 AI842364|P15|P9|Pc4|Rpo2tc1 SUB1 homolog (S. cerevisiae) protein-coding common_peak2_64_303_0.528987006889311_8.51242101688824_5.74462988378959 chr8 116945983 116947323 + 5.74462988378959 NA intron (NM_177700, intron 1 of 3) intron (NM_177700, intron 1 of 3) 3260 NM_177700 234776 Mm.259736 NM_177700 ENSMUSG00000047388 Atmin Asciz|gpg6|mKIAA0431 ATM interactor protein-coding common_peak1_287_2366_0.202290615883477_11.3099892986764_5.74373833485386 chr5 38560055 38562524 + 5.74373833485386 NA intron (NM_011715, intron 1 of 14) CpG-11048 306 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding common_peak1_187_1342_0.265112120371288_10.5237996496131_5.74357720876838 chr4 147940813 147942259 + 5.74357720876838 NA exon (NM_029841, exon 1 of 3) exon (NM_029841, exon 1 of 3) 641 NM_029841 77034 Mm.183076 NM_029841 ENSMUSG00000044496 2510039O18Rik Kiaa2013 RIKEN cDNA 2510039O18 gene protein-coding common_peak1_38_138_0.754002376884353_7.49594226116568_5.74203930394325 chr5 34973711 34974389 + 5.74203930394325 NA intron (NM_173402, intron 2 of 16) intron (NM_173402, intron 2 of 16) 24602 NM_173402 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak2_356_3978_-0.166983297300812_11.8746985350433_5.74156564670278 chr7 30392108 30396082 + 5.74156564670278 NA Intergenic ID_B1|SINE|B4 -19693 NM_011662 22177 Mm.46301 NM_011662 ENSMUSG00000030579 Tyrobp DAP12|KARAP|Ly83 TYRO protein tyrosine kinase binding protein protein-coding common_peak2_238_1849_0.227794958688904_10.9672070347481_5.74153727546999 chr14 67007752 67009683 + 5.74153727546999 NA exon (NM_009761, exon 1 of 6) exon (NM_009761, exon 1 of 6) 160 NM_009761 12177 Mm.29820 NM_009761 ENSMUSG00000022051 Bnip3l C86132|D14Ertd719e|Nip3L|Nix BCL2/adenovirus E1B interacting protein 3-like protein-coding common_peak1_187_1911_-0.244511098182016_10.7786112588897_5.74133303726744 chr3 108561772 108563580 + 5.74133303726744 NA promoter-TSS (NM_026198) promoter-TSS (NM_026198) -210 NM_026198 67495 Mm.32615 NM_026198 ENSMUSG00000068732 Tmem167b 2010200O16Rik transmembrane protein 167B protein-coding common_peak2_470_4492_0.148146804035497_12.2075367485412_5.74114327530191 chr18 20960500 20964352 + 5.74114327530191 NA intron (NM_026301, intron 1 of 5) intron (NM_026301, intron 1 of 5) 17801 NM_026301 67664 Mm.45980 NM_026301 ENSMUSG00000033107 Rnf125 4930553F04Rik ring finger protein 125 protein-coding common_peak2_142_926_0.315764817956897_10.014307937604_5.73896129962021 chr10 127654113 127656291 + 5.73896129962021 NA intron (NM_009284, intron 12 of 21) intron (NM_009284, intron 12 of 21) 11501 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding common_peak2_329_2829_0.185451508006313_11.5593120917224_5.73870792882499 chr3 59098258 59103156 + 5.73870792882499 NA intron (NM_173398, intron 1 of 1) intron (NM_173398, intron 1 of 1) 1114 NM_173398 229323 Mm.123648 NM_173398 ENSMUSG00000050075 Gpr171 A630006E05|F730001G15Rik|H963 G protein-coupled receptor 171 protein-coding common_peak2_101_970_-0.349044397105379_9.7488052868665_5.73831142065315 chr8 10479417 10482229 + 5.73831142065315 NA intron (NM_001081397, intron 23 of 35) intron (NM_001081397, intron 23 of 35) 326900 NM_001081397 244281 Mm.422761 NM_001081397 ENSMUSG00000039057 Myo16 BM140241|C230040D10Rik|Gm1105|NYAP3|mKIAA0865 myosin XVI protein-coding unique_peak2_9_104_-1.2497236012217_6.08938371705527_5.73812052794494 chr1 163779163 163780163 + 5.73812052794494 NA promoter-TSS (NM_010629) promoter-TSS (NM_010629) 80 NM_010629 16579 Mm.4651 NM_010629 ENSMUSG00000026585 Kifap3 KAP-3|KAP3|SMAP kinesin-associated protein 3 protein-coding common_peak1_38_355_-0.602789981358538_8.17433844028713_5.73736478067784 chr7 3630021 3630655 + 5.73736478067784 NA promoter-TSS (NM_001290381) promoter-TSS (NM_001290381) 353 NM_027328 68988 Mm.246863 NM_027328 ENSMUSG00000008373 Prpf31 1500019O16Rik|2810404O06Rik|AW554706|PRP31|RP11 pre-mRNA processing factor 31 protein-coding common_peak2_51_217_0.613849231050362_8.07510894030211_5.73710879937746 chr7 100582575 100583646 + 5.73710879937746 NA promoter-TSS (NM_198831) promoter-TSS (NM_198831) 20 NM_198831 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e mitochondrial ribosomal protein L48 protein-coding common_peak2_125_778_0.342741953076469_9.7768504945999_5.73641518823249 chr4 12088194 12090672 + 5.73641518823249 NA promoter-TSS (NM_198957) promoter-TSS (NM_198957) 63 NM_198957 77604 Mm.474129 NM_198957 ENSMUSG00000052137 Rbm12b2 AV299215|C430048L16Rik|Rbm12bb RNA binding motif protein 12 B2 protein-coding common_peak2_255_2026_0.217572134403694_11.0939164406687_5.73418863957379 chr5 38904046 38907815 + 5.73418863957379 NA Intergenic LTR78|LTR|ERV1 -29237 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak1_29_90_0.900861792399007_6.9582255363982_5.73390087973225 chr11 5877131 5877773 + 5.73390087973225 NA intron (NM_008894, intron 1 of 10) L2|LINE|L2 804 NM_008894 18972 Mm.35788 NM_008894 ENSMUSG00000020471 Pold2 50kDa|p50|po1D2 polymerase (DNA directed), delta 2, regulatory subunit protein-coding common_peak1_157_1572_-0.270591553116015_10.4840071788577_5.73184846286751 chr5 21256082 21257801 + 5.73184846286751 NA intron (NM_175437, intron 18 of 30) intron (NM_175437, intron 18 of 30) 70674 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_21_52_1.13187728813075_6.29385909862857_5.73141055659995 chr11 11729729 11730159 + 5.73141055659995 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 39767 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding unique_peak1_21_52_1.13187728813075_6.29385909862857_5.73141055659995 chr14 121824126 121824679 + 5.73141055659995 NA Intergenic RMER15|LTR|ERVL -26668 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak2_67_629_-0.442447135040396_9.07798445086708_5.73057720790912 chr9 118167144 118170145 + 5.73057720790912 NA Intergenic Intergenic -18448 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding common_peak2_34_116_0.811080994940129_7.27590521705347_5.73021146859019 chr13 109822637 109823287 + 5.73021146859019 NA intron (NM_011056, intron 7 of 16) GA-rich|Low_complexity|Low_complexity -80847 NR_035442 100316683 NR_035442 ENSMUSG00000084651 Mir1904 Mirn1904|mmu-mir-1904 microRNA 1904 ncRNA common_peak1_21_205_-0.826702784489267_7.27314913493858_5.73021146859019 chr4 117210570 117211018 + 5.73021146859019 NA Intergenic Intergenic -28170 NM_134471 73804 Mm.247651 NM_134471 ENSMUSG00000028678 Kif2c 4930402F02Rik|ESTM5|Knsl6|MCAK|X83316 kinesin family member 2C protein-coding common_peak2_34_116_0.811080994940129_7.27590521705347_5.73021146859019-2 chr9 72969649 72970774 + 5.73021146859019 NA intron (NM_026314, intron 7 of 8) intron (NM_026314, intron 7 of 8) 11426 NM_001163725 67685 Mm.31817 NM_026314 ENSMUSG00000089865 Dyx1c1 1700010I24Rik|Dnaaf4|EKN1|b2b811.1Clo|b2b811Clo dyslexia susceptibility 1 candidate 1 protein-coding unique_peak2_21_205_-0.826702784489267_7.27314913493858_5.73021146859019 chr11 120257091 120258162 + 5.73021146859019 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 24679 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_83_787_-0.391352553285165_9.42637554281379_5.72975704455495 chr10 105841043 105842103 + 5.72975704455495 NA promoter-TSS (NM_207522) promoter-TSS (NM_207522) 94 NM_025602 52713 Mm.339224 NM_025602 ENSMUSG00000019897 Ccdc59 2300004H16Rik|D10Ertd718e coiled-coil domain containing 59 protein-coding common_peak1_20_197_-0.851881976281112_7.20341563193905_5.72879931424865-2 chr17 87285452 87285927 + 5.72879931424865 NA intron (NM_028639, intron 1 of 19) intron (NM_028639, intron 1 of 19) 2803 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak1_20_197_-0.851881976281112_7.20341563193905_5.72879931424865-3 chr19 11293072 11293461 + 5.72879931424865 NA intron (NR_045317, intron 2 of 2) intron (NR_045317, intron 2 of 2) -9453 NM_183190 269063 Mm.268940 NM_183190 ENSMUSG00000054523 Ms4a5 - membrane-spanning 4-domains, subfamily A, member 5 protein-coding common_peak1_20_197_-0.851881976281112_7.20341563193905_5.72879931424865 chr13 81782618 81783067 + 5.72879931424865 NA promoter-TSS (NM_007684) promoter-TSS (NM_007684) -450 NM_007684 12626 Mm.12481 NM_007684 ENSMUSG00000021537 Cetn3 MmCEN3 centrin 3 protein-coding common_peak1_20_48_1.16276479968329_6.19609224395685_5.72872433320721-4 chr2 19389144 19389562 + 5.72872433320721 NA intron (NM_029619, intron 3 of 4) L1_Mus2|LINE|L1 17717 NM_029619 76467 Mm.27166 NM_029619 ENSMUSG00000023094 Msrb2 2310050L06Rik|Mrsb|Msrb|Pilb methionine sulfoxide reductase B2 protein-coding common_peak1_20_48_1.16276479968329_6.19609224395685_5.72872433320721-3 chr11 117329761 117330260 + 5.72872433320721 NA intron (NM_001113487, intron 2 of 10) B1F|SINE|Alu -1705 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_20_48_1.16276479968329_6.19609224395685_5.72872433320721 chr1 138152226 138152646 + 5.72872433320721 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 22690 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding unique_peak1_20_48_1.16276479968329_6.19609224395685_5.72872433320721 chr9 21909761 21910124 + 5.72872433320721 NA 3' UTR (NM_031874, exon 5 of 5) 3' UTR (NM_031874, exon 5 of 5) 8179 NM_031874 19340 Mm.260157 NM_031874 ENSMUSG00000019066 Rab3d C130057E11Rik RAB3D, member RAS oncogene family protein-coding common_peak1_20_48_1.16276479968329_6.19609224395685_5.72872433320721-2 chr11 87734892 87735323 + 5.72872433320721 NA 3' UTR (NM_172448, exon 10 of 10) 3' UTR (NM_172448, exon 10 of 10) -2458 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding unique_peak2_10_113_-1.19970458265715_6.23303772283617_5.72870410147513 chr10 13866427 13867517 + 5.72870410147513 NA intron (NM_025446, intron 1 of 5) T-rich|Low_complexity|Low_complexity 1858 NM_025446 66253 Mm.45755 NM_025446 ENSMUSG00000019806 Aig1 1500031O19Rik|AV064870|AW413422|CGI-103 androgen-induced 1 protein-coding unique_peak2_10_113_-1.19970458265715_6.23303772283617_5.72870410147513-2 chr14 57772419 57773301 + 5.72870410147513 NA Intergenic B2_Mm2|SINE|B2 -25329 NM_009119 20220 Mm.30173 NM_009119 ENSMUSG00000021963 Sap18 C530046K05Rik|D11Ertd539e|EMegR4|Sap18a|Sinbp1 Sin3-associated polypeptide 18 protein-coding unique_peak2_10_113_-1.19970458265715_6.23303772283617_5.72870410147513-4 chr6 99063201 99064096 + 5.72870410147513 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) -35350 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_10_113_-1.19970458265715_6.23303772283617_5.72870410147513-3 chr4 106139214 106139847 + 5.72870410147513 NA Intergenic Charlie16a|DNA|hAT-Charlie -176683 NM_183225 329908 Mm.234544 NM_183225 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 protein-coding unique_peak2_10_113_-1.19970458265715_6.23303772283617_5.72870410147513-5 chr6 114644216 114645079 + 5.72870410147513 NA intron (NM_028835, intron 1 of 18) intron (NM_028835, intron 1 of 18) 1550 NM_001253717 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding common_peak1_430_4005_0.156608997335541_12.0462512044805_5.72853534930821 chr12 80130890 80133105 + 5.72853534930821 NA intron (NR_033514, intron 1 of 2) intron (NR_033514, intron 1 of 2) 847 NR_033514 69548 Mm.269712 NR_033514 ENSMUSG00000097729 2310015A10Rik 5330419I17Rik RIKEN cDNA 2310015A10 gene ncRNA common_peak2_70_345_0.498531318210292_8.68389388674187_5.72718005928014 chr13 67331993 67333300 + 5.72718005928014 NA promoter-TSS (NM_177622) promoter-TSS (NM_177622) -86 NM_177622 218314 Mm.289695 NM_177622 ENSMUSG00000057842 Zfp595 A230042K10Rik|Rslcan23 zinc finger protein 595 protein-coding common_peak2_109_644_0.374747979261656_9.52052933994144_5.72503131255631 chr1 180941555 180943468 + 5.72503131255631 NA promoter-TSS (NM_144794) promoter-TSS (NM_144794) -7 NM_144794 208795 Mm.185518 NM_144794 ENSMUSG00000026519 Tmem63a BC014795|Tmem64a transmembrane protein 63a protein-coding common_peak2_253_2688_-0.204031034512473_11.2908385226166_5.72408929923792 chr3 126595610 126598635 + 5.72408929923792 NA 5' UTR (NM_001025438, exon 1 of 19) 5' UTR (NM_001025438, exon 1 of 19) 171 NM_023813 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak1_28_266_-0.712032617174986_7.70467962310006_5.72381464997431 chr11 120483801 120484583 + 5.72381464997431 NA promoter-TSS (NM_027204) promoter-TSS (NM_027204) -477 NM_027204 56282 Mm.133851 NM_027204 ENSMUSG00000039640 Mrpl12 0610034O11Rik|1500031N16Rik|MRP-L12|Rpml12 mitochondrial ribosomal protein L12 protein-coding common_peak2_269_2883_-0.196929984336551_11.3953904570725_5.72238769491331 chr5 124326694 124331383 + 5.72238769491331 NA intron (NM_028310, intron 1 of 1) intron (NM_028310, intron 1 of 1) 949 NM_001134717 72650 Mm.121658 NM_028310 ENSMUSG00000047635 2810006K23Rik - RIKEN cDNA 2810006K23 gene protein-coding common_peak1_117_711_0.356405285261783_9.65393607359729_5.72033395471017 chr6 4600590 4601940 + 5.72033395471017 NA exon (NM_145398, exon 1 of 18) exon (NM_145398, exon 1 of 18) 199 NM_145398 213819 Mm.270703 NM_145398 ENSMUSG00000015189 Casd1 Cas1|Cast1 CAS1 domain containing 1 protein-coding common_peak2_212_1587_0.244298864857344_10.7551446295716_5.71968217568722 chr2 181286763 181289157 + 5.71968217568722 NA promoter-TSS (NM_198169) promoter-TSS (NM_198169) 6 NM_198169 229004 Mm.220423 NM_198169 ENSMUSG00000038705 Gmeb2 AI839884 glucocorticoid modulatory element binding protein 2 protein-coding common_peak1_28_85_0.92239855981047_6.88746403460733_5.71964027898965 chr12 102360772 102361366 + 5.71964027898965 NA intron (NM_001161365, intron 5 of 9) intron (NM_001161365, intron 5 of 9) 77428 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_16_163_-0.954015743643912_6.88054413279613_5.71964027898962 chr4 43045376 43045720 + 5.71964027898962 NA intron (NR_045567, intron 1 of 7) intron (NR_045567, intron 1 of 7) 672 NR_045567 230088 Mm.260162 NM_172691 ENSMUSG00000036002 Fam214b B230312A22Rik family with sequence similarity 214, member B protein-coding common_peak1_65_609_-0.448733173603012_9.02829884564874_5.71900185335506 chr5 77310144 77310938 + 5.71900185335506 NA promoter-TSS (NM_153798) promoter-TSS (NM_153798) 57 NM_153798 231329 Mm.273217 NM_153798 ENSMUSG00000029250 Polr2b Pol2rb|Rpb140|Rpb2 polymerase (RNA) II (DNA directed) polypeptide B protein-coding common_peak2_65_609_-0.448733173603012_9.02829884564874_5.71900185335506 chrX 20960985 20962767 + 5.71900185335506 NA promoter-TSS (NR_027446) promoter-TSS (NR_027446) 102 NM_013840 22294 Mm.34779 NM_013840 ENSMUSG00000001134 Uxt 0910002B17Rik ubiquitously expressed transcript protein-coding common_peak1_26_248_-0.737794365228486_7.59110474945384_5.71887792763821-2 chr8 25276146 25276698 + 5.71887792763821 NA Intergenic Intergenic 29848 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak1_26_248_-0.737794365228486_7.59110474945384_5.71887792763821 chr11 79962527 79963036 + 5.71887792763821 NA promoter-TSS (NM_144826) promoter-TSS (NM_144826) -394 NM_144826 216987 Mm.274961 NM_144826 ENSMUSG00000035575 Utp6 4732497O03Rik|HCA66 UTP6 small subunit processome component protein-coding common_peak2_23_222_-0.78712443182821_7.4073376840062_5.71619355086195 chr3 130714742 130715532 + 5.71619355086195 NA Intergenic Intergenic -5693 NM_025509 66357 Mm.300697 NM_025509 ENSMUSG00000041084 Ostc 2310008M10Rik|5730557H03Rik oligosaccharyltransferase complex subunit (non-catalytic) protein-coding common_peak1_84_797_-0.388603088369853_9.44594339203742_5.71392031346824 chr16 8828977 8829864 + 5.71392031346824 NA promoter-TSS (NM_001081400) promoter-TSS (NM_001081400) -680 NM_001081400 69053 Mm.390868 NM_001081400 ENSMUSG00000022507 1810013L24Rik 1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903 RIKEN cDNA 1810013L24 gene protein-coding common_peak1_56_522_-0.486168416696769_8.78758292789856_5.71265633900752 chr6 10186299 10186804 + 5.71265633900752 NA Intergenic Lx2|LINE|L1 787827 NR_033776 57866 Mm.4397 NR_033776 AA545190 - EST AA545190 ncRNA common_peak2_46_186_0.656236627538381_7.87501277365683_5.71157851231638 chr5 51551962 51553252 + 5.71157851231638 NA intron (NR_132764, intron 1 of 12) intron (NR_132764, intron 1 of 12) 1314 NR_027710 19017 Mm.259072 NM_008904 ENSMUSG00000029167 Ppargc1a A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PPARGC-1-alpha|Pgc-1alpha|Pgc1|Pgco1|Ppargc1 peroxisome proliferative activated receptor, gamma, coactivator 1 alpha protein-coding common_peak2_27_80_0.946714747133301_6.81320737645127_5.71151257406984 chr11 52568799 52569426 + 5.71151257406984 NA Intergenic Intergenic 172684 NM_153117 213673 Mm.291979 NM_153117 ENSMUSG00000036275 9530068E07Rik C85061|Kct2 RIKEN cDNA 9530068E07 gene protein-coding common_peak1_27_80_0.946714747133301_6.81320737645127_5.71151257406984 chr17 7892861 7893439 + 5.71151257406984 NA Intergenic Intergenic -32850 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding common_peak1_27_80_0.946714747133301_6.81320737645127_5.71151257406984-3 chr5 107966405 107967062 + 5.71151257406984 NA intron (NM_026062, intron 1 of 4) B4|SINE|B4 20344 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_27_80_0.946714747133301_6.81320737645127_5.71151257406984-2 chr4 156196981 156197548 + 5.71151257406984 NA exon (NM_021604, exon 1 of 36) exon (NM_021604, exon 1 of 36) 224 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak1_26_75_0.97428005339601_6.73506754014159_5.7105416653496 chr7 19181144 19181686 + 5.7105416653496 NA promoter-TSS (NR_029763) promoter-TSS (NR_029763) -50 NR_029763 724063 NR_029763 ENSMUSG00000065543 Mir330 Mirn330|mir-330|mmu-mir-330 microRNA 330 ncRNA common_peak2_54_503_-0.495988905114_8.72928547094292_5.7094078324039 chrX 20270299 20273345 + 5.7094078324039 NA intron (NM_177353, intron 1 of 16) intron (NM_177353, intron 1 of 16) 19942 NM_177353 236727 Mm.132983 NM_177353 ENSMUSG00000037341 Slc9a7 A530087D17Rik|NHE7 solute carrier family 9 (sodium/hydrogen exchanger), member 7 protein-coding unique_peak1_16_32_1.35914214161572_5.72396519016631_5.70920165600073-4 chr6 7847119 7847585 + 5.70920165600073 NA intron (NM_052993, intron 1 of 3) intron (NM_052993, intron 1 of 3) 2128 NM_052993 94192 Mm.102752 NM_052993 ENSMUSG00000042460 C1galt1 2210410E06Rik|AV284120|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 protein-coding unique_peak1_16_32_1.35914214161572_5.72396519016631_5.70920165600073-2 chr10 77984492 77985002 + 5.70920165600073 NA 3' UTR (NM_026431, exon 7 of 7) 3' UTR (NM_026431, exon 7 of 7) 6097 NM_026431 67884 Mm.297512 NM_026431 ENSMUSG00000020284 1810043G02Rik AV026620|D10Jhu13e RIKEN cDNA 1810043G02 gene protein-coding unique_peak1_16_32_1.35914214161572_5.72396519016631_5.70920165600073 chr10 59335415 59335869 + 5.70920165600073 NA intron (NM_001316370, intron 1 of 13) intron (NM_001316370, intron 1 of 13) 12346 NM_001316370 18451 Mm.2212 NM_011030 ENSMUSG00000019916 P4ha1 AL022634|P4ha procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide protein-coding common_peak1_16_32_1.35914214161572_5.72396519016631_5.70920165600073 chr5 121592976 121593370 + 5.70920165600073 NA intron (NM_001308450, intron 1 of 10) CpG 651 NM_009656 11669 Mm.284446 NM_009656 ENSMUSG00000029455 Aldh2 AHD-M1|ALDH-E2|ALDHI|Ahd-5|Ahd5 aldehyde dehydrogenase 2, mitochondrial protein-coding unique_peak1_16_32_1.35914214161572_5.72396519016631_5.70920165600073-3 chr5 121368599 121369043 + 5.70920165600073 NA TTS (NM_181421) TTS (NM_181421) 16794 NM_001163470 231712 Mm.20488 NM_172275 ENSMUSG00000042726 Trafd1 1110008K06Rik|Fln29 TRAF type zinc finger domain containing 1 protein-coding common_peak1_119_728_0.35210605064348_9.68582802964868_5.70843552131601 chr18 75454572 75456498 + 5.70843552131601 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -59110 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA common_peak2_58_542_-0.479281982762537_8.84516739642309_5.70816568472453 chr9 44417090 44418702 + 5.70816568472453 NA exon (NM_201372, exon 1 of 11) exon (NM_201372, exon 1 of 11) 111 NM_201372 382073 Mm.259573 NM_201372 ENSMUSG00000043923 Ccdc84 D630044F24Rik|Gm1114 coiled-coil domain containing 84 protein-coding common_peak1_135_1330_-0.29492166137865_10.2308340252226_5.7075367042506 chr2 144269914 144271304 + 5.7075367042506 NA promoter-TSS (NM_001289631) promoter-TSS (NM_001289631) -37 NM_024225 69178 Mm.273379 NM_024225 ENSMUSG00000027423 Snx5 0910001N05Rik|1810032P22Rik|AU019504|D2Ertd52e sorting nexin 5 protein-coding unique_peak2_4_63_-1.76209039474194_5.11895480262903_5.70752677832509 chr4 101228520 101229000 + 5.70752677832509 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 36522 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding unique_peak2_4_63_-1.76209039474194_5.11895480262903_5.70752677832509-2 chr4 137344061 137344598 + 5.70752677832509 NA intron (NM_001243769, intron 1 of 5) MT2B1|LTR|ERVL 13430 NM_009861 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak1_33_310_-0.650622197970076_7.95545967114557_5.70733471314314 chr14 70287683 70288357 + 5.70733471314314 NA intron (NM_001304992, intron 1 of 12) intron (NM_001304992, intron 1 of 12) 1477 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak1_48_198_0.640251616367036_7.95675042872717_5.70733471314304 chr11 86256785 86257621 + 5.70733471314304 NA intron (NM_027421, intron 1 of 24) CpG 365 NM_027421 70422 Mm.171304 NM_027421 ENSMUSG00000018068 Ints2 2810417D08Rik|AA408260|AI987735|mKIAA1287 integrator complex subunit 2 protein-coding common_peak2_68_331_0.507555888899869_8.62881737579686_5.70522295011231 chr15 79773791 79775217 + 5.70522295011231 NA promoter-TSS (NM_017470) promoter-TSS (NM_017470) -37 NM_017470 54152 Mm.288159 NM_017470 ENSMUSG00000022420 Dnal4 D15Ertd424e|Dnalc4 dynein, axonemal, light chain 4 protein-coding common_peak1_40_373_-0.585451194822212_8.25416886247653_5.7050997124499 chr6 87493940 87494456 + 5.7050997124499 NA intron (NM_001286610, intron 1 of 9) intron (NM_001286610, intron 1 of 9) 2129 NR_104483 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak1_23_61_1.05957915770522_6.48398588923948_5.70473755504282 chr8 117303285 117303766 + 5.70473755504282 NA intron (NM_001163262, intron 1 of 20) L2|LINE|L2 -45645 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak2_12_129_-1.09355887957388_6.47558837324152_5.70473755504281 chr11 52275639 52276527 + 5.70473755504281 NA intron (NM_001313981, intron 3 of 10) intron (NM_001313981, intron 3 of 10) 6512 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak1_22_214_-0.80973204549595_7.34332682684149_5.7037381445573-2 chr4 136172997 136173377 + 5.7037381445573 NA intron (NM_177733, intron 1 of 6) CpG 913 NM_177733 242705 Mm.307932 NM_177733 ENSMUSG00000018983 E2f2 E2F-2 E2F transcription factor 2 protein-coding common_peak1_22_214_-0.80973204549595_7.34332682684149_5.7037381445573 chr15 66806503 66807015 + 5.7037381445573 NA intron (NM_001029841, intron 1 of 7) intron (NM_001029841, intron 1 of 7) 25070 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_332_2864_0.18373325987371_11.5761860535811_5.70320400351746 chr10 12962069 12965270 + 5.70320400351746 NA intron (NM_029075, intron 1 of 2) intron (NM_029075, intron 1 of 2) 590 NM_029075 74732 Mm.248648 NM_029075 ENSMUSG00000039232 Stx11 5830405C08Rik syntaxin 11 protein-coding common_peak1_63_296_0.535158764697114_8.48189850314932_5.70260259211439 chr2 144599558 144600438 + 5.70260259211439 NA promoter-TSS (NM_025314) promoter-TSS (NM_025314) 45 NM_025314 66044 Mm.28109 NM_025314 ENSMUSG00000027430 Dtd1 0610006H08Rik|DUE-B|Hars2 D-tyrosyl-tRNA deacylase 1 protein-coding common_peak1_24_231_-0.771965802991188_7.47199809363198_5.70225171726312 chr8 123000466 123001042 + 5.70225171726312 NA intron (NR_037865, intron 1 of 13) B1_Mus1|SINE|Alu 41530 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_224_1708_0.235347542766812_10.8566104530595_5.70164172030169 chr11 62574008 62577545 + 5.70164172030169 NA intron (NM_011706, intron 1 of 15) intron (NM_011706, intron 1 of 15) 1290 NM_011706 22368 Mm.288064 NM_011706 ENSMUSG00000018507 Trpv2 GRC|OTRPC2|VRL-1|Vrl1 transient receptor potential cation channel, subfamily V, member 2 protein-coding common_peak2_54_236_0.592547769487656_8.18501713364209_5.70017011239518 chr15 58930498 58931856 + 5.70017011239518 NA intron (NM_175151, intron 1 of 11) intron (NM_175151, intron 1 of 11) 2553 NM_175151 69694 Mm.383230 NM_175151 ENSMUSG00000050891 Tatdn1 2310079P03Rik|CDA11 TatD DNase domain containing 1 protein-coding common_peak1_184_1875_-0.245554874425645_10.7506666753026_5.70000508119718 chr6 48679914 48682702 + 5.70000508119718 NA Intergenic B3|SINE|B2 -3270 NM_001243200 107526 Mm.333048 NM_174990 ENSMUSG00000054435 Gimap4 AU019574|E430007K16Rik|Ian-1|Ian1|Imap4 GTPase, IMAP family member 4 protein-coding common_peak2_106_1021_-0.338209061581848_9.8280749501467_5.69968692531975 chr7 79391504 79393336 + 5.69968692531975 NA promoter-TSS (NM_145946) promoter-TSS (NM_145946) 82 NM_145946 208836 Mm.349493 NM_145946 ENSMUSG00000039187 Fanci - Fanconi anemia, complementation group I protein-coding common_peak2_198_1450_0.254149989780673_10.6299067989571_5.69824250528651 chr14 27237169 27239706 + 5.69824250528651 NA intron (NM_027871, intron 1 of 10) intron (NM_027871, intron 1 of 10) 427 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_124_1211_-0.309053204458248_10.0886473812438_5.69667576042615 chr10 127290688 127291817 + 5.69667576042615 NA intron (NM_001290183, intron 1 of 2) intron (NM_001290183, intron 1 of 2) 459 NM_001290183 13198 Mm.110220 NM_007837 ENSMUSG00000025408 Ddit3 CHOP-10|CHOP10|chop|gadd153 DNA-damage inducible transcript 3 protein-coding common_peak2_100_959_-0.35004240200306_9.73186939460699_5.69660622417206 chr11 23007069 23009056 + 5.69660622417206 NA Intergenic Intergenic -5325 NM_028672 73873 Mm.252406 NM_028672 ENSMUSG00000049811 Fam161a 4930430E16Rik family with sequence similarity 161, member A protein-coding unique_peak2_8_96_-1.32183979150082_5.93899294643672_5.69457870930761 chr8 106074901 106075614 + 5.69457870930761 NA intron (NM_010901, intron 1 of 9) Cheshire|DNA|hAT-Charlie 15654 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding common_peak1_253_2687_-0.20349441741836_11.2905702140696_5.69454429946766 chr2 18063718 18065264 + 5.69454429946766 NA promoter-TSS (NM_001252561) promoter-TSS (NM_001252561) -94 NM_001252560 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding common_peak1_158_1582_-0.268569258540783_10.4941609108668_5.69423478360222 chr10 7662378 7664026 + 5.69423478360222 NA promoter-TSS (NR_030698) promoter-TSS (NR_030698) -169 NR_030698 320642 Mm.398806 NR_030698 A630066F11Rik - RIKEN cDNA A630066F11 gene ncRNA common_peak2_25_240_-0.75746809158903_7.53415529043545_5.69413927327551 chr4 84008182 84009225 + 5.69413927327551 NA Intergenic Intergenic 36176 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA unique_peak2_25_240_-0.75746809158903_7.53415529043545_5.69413927327551 chr5 115564703 115565948 + 5.69413927327551 NA promoter-TSS (NM_172719) promoter-TSS (NM_172719) 62 NM_172719 231659 Mm.153014 NM_172719 ENSMUSG00000041638 Gcn1l1 4932409G22|AL022764|G431004K08Rik|GCN1L|Gcn1|mKIAA0219 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) protein-coding common_peak2_37_133_0.760887324125474_7.44653285252051_5.6930659899352 chr4 148940395 148941572 + 5.6930659899352 NA intron (NM_001159344, intron 11 of 20) intron (NM_001159344, intron 11 of 20) 136591 NM_027195 69743 Mm.233879 NM_027195 ENSMUSG00000028977 Casz1 2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e castor zinc finger 1 protein-coding common_peak2_37_133_0.760887324125474_7.44653285252051_5.6930659899352-2 chr5 113472135 113473009 + 5.6930659899352 NA Intergenic Intergenic -77848 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak1_33_111_0.822793650102923_7.21875174710907_5.69268683066234 chr2 49733086 49733790 + 5.69268683066234 NA intron (NM_008449, intron 15 of 25) MLT1L|LTR|ERVL-MaLR -54248 NM_027990 71897 Mm.41381 NM_027990 ENSMUSG00000026765 Lypd6b 2310010M24Rik|AW049525 LY6/PLAUR domain containing 6B protein-coding common_peak1_45_419_-0.549172402386258_8.43965931647299_5.69186797739479-2 chr17 25257683 25258467 + 5.69186797739479 NA Intergenic Intergenic -1711 NM_001163270 545192 Mm.328859 NM_001163270 ENSMUSG00000047507 Baiap3 Bap3|Gm937 BAI1-associated protein 3 protein-coding unique_peak2_45_419_-0.549172402386258_8.43965931647299_5.69186797739479 chr5 75661327 75663280 + 5.69186797739479 NA Intergenic Intergenic 87312 NM_021099 16590 Mm.247073 NM_021099 ENSMUSG00000005672 Kit Bs|CD117|Fdc|Gsfsco1|Gsfsco5|Gsfsow3|SCO1|SCO5|SOW3|Ssm|Tr-kit|W|c-KIT KIT proto-oncogene receptor tyrosine kinase protein-coding common_peak1_45_419_-0.549172402386258_8.43965931647299_5.69186797739479 chr11 53808992 53809895 + 5.69186797739479 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 38970 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_40_150_0.723038525740347_7.59992400219525_5.6911391717704 chr11 75147059 75148323 + 5.6911391717704 NA intron (NM_001002764, intron 15 of 18) intron (NM_001002764, intron 15 of 18) 20461 NM_001098203 15248 Mm.57250 NM_010430 ENSMUSG00000043099 Hic1 AA408311|HIC-1 hypermethylated in cancer 1 protein-coding common_peak1_17_171_-0.921579392829431_6.96547505828738_5.69105211213162 chr11 120713289 120713752 + 5.69105211213162 NA promoter-TSS (NM_153545) promoter-TSS (NM_153545) 247 NM_016665 20892 Mm.259716 NM_016665 ENSMUSG00000025144 Cenpx Stra13 centromere protein X protein-coding common_peak1_17_171_-0.921579392829431_6.96547505828738_5.69105211213162-2 chr3 103397306 103397732 + 5.69105211213162 NA Intergenic Charlie1a|DNA|hAT-Charlie 118226 NM_001079830 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding unique_peak2_6_80_-1.50650987523941_5.58659506526492_5.69055214593517-4 chr11 24242317 24242901 + 5.69055214593517 NA Intergenic Intergenic 161914 NM_001159290 14025 Mm.53687 NM_016707 ENSMUSG00000000861 Bcl11a 2810047E18Rik|BCL-11A|Ctip1|D930021L15Rik|Evi9|Evi9a|Evi9b|Evi9c|mKIAA1809 B cell CLL/lymphoma 11A (zinc finger protein) protein-coding unique_peak2_6_80_-1.50650987523941_5.58659506526492_5.69055214593517-2 chr10 76306944 76307686 + 5.69055214593517 NA intron (NM_001081419, intron 6 of 37) intron (NM_001081419, intron 6 of 37) 37976 NM_001081419 64451 Mm.33183 NM_001081419 ENSMUSG00000020231 Dip2a 4931420H10Rik|AI426328|Dip2|Kiaa0184-hp|mKIAA0184 disco interacting protein 2 homolog A protein-coding unique_peak2_6_80_-1.50650987523941_5.58659506526492_5.69055214593517-5 chr3 87885832 87886470 + 5.69055214593517 NA promoter-TSS (NM_033573) promoter-TSS (NM_033573) -589 NM_033573 94315 Mm.35089 NM_033573 ENSMUSG00000004895 Prcc - papillary renal cell carcinoma (translocation-associated) protein-coding unique_peak2_6_80_-1.50650987523941_5.58659506526492_5.69055214593517 chr1 39904798 39905426 + 5.69055214593517 NA intron (NM_001252200, intron 2 of 31) B4A|SINE|B4 4199 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding unique_peak2_6_80_-1.50650987523941_5.58659506526492_5.69055214593517-3 chr10 79959326 79959785 + 5.69055214593517 NA promoter-TSS (NM_175450) promoter-TSS (NM_175450) -597 NM_175450 216156 Mm.35828 NM_175450 ENSMUSG00000035754 Wdr18 2310012I10Rik|AU044733|AW122032 WD repeat domain 18 protein-coding unique_peak2_6_80_-1.50650987523941_5.58659506526492_5.69055214593517-6 chr8 3345136 3345853 + 5.69055214593517 NA Intergenic Intergenic -7921 NM_001033378 319493 Mm.234565 NM_001033378 ENSMUSG00000074497 A430078G23Rik - RIKEN cDNA A430078G23 gene protein-coding common_peak2_50_211_0.619750322564258_8.03779561584533_5.69048193652177 chr10 62664680 62666115 + 5.69048193652177 NA exon (NM_001033260, exon 3 of 4) exon (NM_001033260, exon 3 of 4) -14199 NM_053183 94213 Mm.114116 NM_053183 ENSMUSG00000020076 Ddx50 4933429B04Rik|8430408E17Rik|GU2|RH-II DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein-coding common_peak2_43_168_0.685530617598123_7.74364474508125_5.68975166114029 chr15 102234189 102235236 + 5.68975166114029 NA TTS (NM_011244) TTS (NM_011244) -2777 NM_013566 16421 Mm.58 NM_013566 ENSMUSG00000001281 Itgb7 Ly69 integrin beta 7 protein-coding common_peak2_43_168_0.685530617598123_7.74364474508125_5.68975166114029-2 chr5 118245160 118246011 + 5.68975166114029 NA promoter-TSS (NM_172998) promoter-TSS (NM_172998) 358 NM_001081236 76792 Mm.103428 NM_001081236 ENSMUSG00000032840 2410131K14Rik - RIKEN cDNA 2410131K14 gene protein-coding common_peak1_101_969_-0.347557848760678_9.74806201269415_5.68915612067637 chr12 85338800 85339956 + 5.68915612067637 NA promoter-TSS (NM_145138) promoter-TSS (NM_145138) -16 NM_145138 217718 Mm.29071 NM_145138 ENSMUSG00000034290 Nek9 C130021H08Rik NIMA (never in mitosis gene a)-related expressed kinase 9 protein-coding common_peak1_452_4274_0.150946196478211_12.1371818028997_5.68894932373388 chr6 125479858 125483654 + 5.68894932373388 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 12999 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak1_100_572_0.394456864848552_9.35961976118118_5.68688108768131 chr11 116273465 116274890 + 5.68688108768131 NA promoter-TSS (NM_146032) promoter-TSS (NM_146032) 40 NM_146032 217337 Mm.29655 NM_146032 ENSMUSG00000020780 Srp68 2610024I03Rik signal recognition particle 68 protein-coding common_peak1_47_437_-0.534399280322722_8.50758741943981_5.68644154670378 chr1 21353618 21354355 + 5.68644154670378 NA Intergenic Intergenic 4309 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak2_126_1233_-0.306915984975372_10.1156686866617_5.68616266609769 chr17 73004401 73006673 + 5.68616266609769 NA Intergenic Intergenic 87232 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_57_531_-0.480006809802264_8.81527903060006_5.68269991237045 chr9 48984369 48985154 + 5.68269991237045 NA promoter-TSS (NM_175482) promoter-TSS (NM_175482) -624 NM_175482 235323 Mm.21630 NM_175482 ENSMUSG00000032267 Usp28 9830148O20Rik|AU022237|mKIAA1515 ubiquitin specific peptidase 28 protein-coding common_peak1_42_391_-0.568982673861257_8.33021850718458_5.68217449637335 chr2 25140796 25141819 + 5.68217449637335 NA Intergenic Intergenic -39451 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak2_386_3485_0.166639348434831_11.8506765283431_5.68087854233059 chr11 75458880 75463034 + 5.68087854233059 NA promoter-TSS (NR_030711) promoter-TSS (NR_030711) -582 NR_030711 100042498 Mm.482242 NR_030711 ENSMUSG00000085148 Mir22hg 2210403K04Rik|mir-22 Mir22 host gene (non-protein coding) ncRNA common_peak2_91_867_-0.369865805978256_9.57661832945535_5.68066640593029 chr6 40889944 40892343 + 5.68066640593029 NA intron (NR_035473, intron 2 of 3) intron (NR_035473, intron 2 of 3) -3649 NM_139296 194357 Mm.207087 NM_139296 ENSMUSG00000029885 Moxd2 Dbhl1 monooxygenase, DBH-like 2 protein-coding common_peak1_22_57_1.08047980896594_6.39822089961054_5.68057377696343-4 chr7 6331046 6331528 + 5.68057377696343 NA promoter-TSS (NM_001033249) promoter-TSS (NM_001033249) -853 NM_001033249 213011 Mm.333558 NM_001033249 ENSMUSG00000030443 Zfp583 BC056221|Znf583 zinc finger protein 583 protein-coding unique_peak1_22_57_1.08047980896594_6.39822089961054_5.68057377696343 chr4 41304599 41305213 + 5.68057377696343 NA intron (NM_026893, intron 2 of 8) intron (NM_026893, intron 2 of 8) 9995 NM_026893 68970 Mm.28891 NM_026893 ENSMUSG00000028436 Dcaf12 1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a DDB1 and CUL4 associated factor 12 protein-coding common_peak1_22_57_1.08047980896594_6.39822089961054_5.68057377696343-3 chr3 27710046 27710413 + 5.68057377696343 NA intron (NM_173182, intron 1 of 25) CpG 210 NM_173182 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_22_57_1.08047980896594_6.39822089961054_5.68057377696343-2 chr1 184534851 184535431 + 5.68057377696343 NA intron (NR_040472, intron 2 of 5) intron (NR_040472, intron 2 of 5) 22550 NR_040472 73590 Mm.82792 NR_040472 ENSMUSG00000101574 1700112H15Rik - RIKEN cDNA 1700112H15 gene ncRNA common_peak1_22_57_1.08047980896594_6.39822089961054_5.68057377696343 chr1 171632375 171633025 + 5.68057377696343 NA 3' UTR (NM_144539, exon 8 of 8) 3' UTR (NM_144539, exon 8 of 8) 9200 NR_106151 102465784 NR_106151 ENSMUSG00000098316 Mir7683 Gm27950|mmu-mir-7683 microRNA 7683 ncRNA common_peak1_61_283_0.543547396415981_8.42152081771267_5.67939311657264 chr6 113483306 113483943 + 5.67939311657264 NA promoter-TSS (NM_133930) promoter-TSS (NM_133930) 55 NM_133930 171508 Mm.41593 NM_133930 ENSMUSG00000030284 Creld1 AI843811 cysteine-rich with EGF-like domains 1 protein-coding common_peak1_109_1052_-0.332386391453445_9.874096525299_5.67891098816943 chr12 16525164 16526293 + 5.67891098816943 NA Intergenic Intergenic 64042 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak1_95_533_0.406304158777253_9.26384801107618_5.67762263026017 chr4 11720223 11721427 + 5.67762263026017 NA Intergenic MIRc|SINE|MIR 16378 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding common_peak2_129_1265_-0.302534857909089_10.1547942604738_5.67724673143855 chr2 32287149 32289377 + 5.67724673143855 NA promoter-TSS (NM_133852) promoter-TSS (NM_133852) 10 NM_001080968 99412 Mm.106376 NM_133852 ENSMUSG00000002546 Golga2 AW555139|GM130|mKIAA4150 golgi autoantigen, golgin subfamily a, 2 protein-coding common_peak2_358_3160_0.174927779343017_11.713629209576_5.67697915911521 chr15 84894801 84899598 + 5.67697915911521 NA Intergenic Intergenic -26229 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak2_117_1137_-0.3201461260784_9.99221177926738_5.67695925258211 chrX 155214317 155217174 + 5.67695925258211 NA intron (NM_001291865, intron 2 of 6) intron (NM_001291865, intron 2 of 6) 704 NM_009121 20229 Mm.2734 NM_009121 ENSMUSG00000025283 Sat1 AA617398|SSAT|Sat spermidine/spermine N1-acetyl transferase 1 protein-coding common_peak1_55_512_-0.489637954402772_8.75799603840567_5.67680835719655 chr15 76203144 76204194 + 5.67680835719655 NA intron (NM_011117, intron 1 of 31) intron (NM_011117, intron 1 of 31) 2652 NM_201389 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_115_695_0.358944441036552_9.622415716367_5.67586411903615 chr19 56722042 56724119 + 5.67586411903615 NA exon (NM_007419, exon 1 of 1) exon (NM_007419, exon 1 of 1) 708 NM_007419 11554 Mm.46797 NM_007419 ENSMUSG00000035283 Adrb1 Adrb-1|beta-AR adrenergic receptor, beta 1 protein-coding common_peak1_178_1258_0.271482017703752_10.4338035765709_5.67469152805928 chr1 34472330 34474182 + 5.67469152805928 NA intron (NM_011206, intron 13 of 14) intron (NM_011206, intron 13 of 14) 13510 NM_011206 19253 Mm.361 NM_011206 ENSMUSG00000026126 Ptpn18 FLP1|HSCF|PTP-HSCF|PTP-K1|Ptpk1 protein tyrosine phosphatase, non-receptor type 18 protein-coding common_peak2_173_1750_-0.254553226581349_10.6466867551429_5.67411487751671 chr11 3122528 3125037 + 5.67411487751671 NA promoter-TSS (NR_003517) promoter-TSS (NR_003517) -239 NR_003517 236604 Mm.247625 NM_001004146 Pisd-ps1 - phosphatidylserine decarboxylase, pseudogene 1 pseudo common_peak1_49_456_-0.523422851735329_8.57433892919041_5.67253548105873 chr13 100729910 100731038 + 5.67253548105873 NA exon (NM_009874, exon 2 of 12) exon (NM_009874, exon 2 of 12) 468 NM_009874 12572 Mm.259718 NM_009874 ENSMUSG00000069089 Cdk7 AI323415|AI528512|C230069N13|Cdkn7|Crk4 cyclin-dependent kinase 7 protein-coding common_peak1_18_179_-0.891488892932784_7.04610864986328_5.6719529181494-2 chr10 117952999 117953379 + 5.6719529181494 NA Intergenic Intergenic 27730 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_18_179_-0.891488892932784_7.04610864986328_5.6719529181494-3 chr15 55089987 55090393 + 5.6719529181494 NA intron (NM_183089, intron 1 of 8) CpG 288 NM_183089 72107 Mm.486550 NM_183089 ENSMUSG00000022422 Dscc1 2010006I05Rik|2600005O03Rik|Dcc1 DNA replication and sister chromatid cohesion 1 protein-coding common_peak1_18_179_-0.891488892932784_7.04610864986328_5.6719529181494-4 chrX 48138092 48138548 + 5.6719529181494 NA Intergenic Intergenic -8116 NM_001313749 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding common_peak1_18_179_-0.891488892932784_7.04610864986328_5.6719529181494 chr1 171677448 171677886 + 5.6719529181494 NA Intergenic MLTR14|LTR|ERV1 -4388 NM_007649 12506 Mm.1738 NM_007649 ENSMUSG00000015355 Cd48 AI449234|AW610730|BCM1|BLAST|BLAST-1|BLAST1|Bcm-1|MEM-102|SLAMF2|Sgp-60 CD48 antigen protein-coding common_peak2_72_360_0.486463999498458_8.7390870266364_5.67157355081134 chr7 78895261 78896737 + 5.67157355081134 NA promoter-TSS (NM_026531) promoter-TSS (NM_026531) 72 NM_001162939 68048 Mm.34109 NM_026531 ENSMUSG00000030609 Aen 2700083B06Rik|Isg20l1 apoptosis enhancing nuclease protein-coding common_peak1_72_360_0.486463999498458_8.7390870266364_5.67157355081134 chr11 104468489 104469524 + 5.67157355081134 NA Intergenic CpG -26715 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak2_97_928_-0.356046238285613_9.68151166723985_5.6714257551237 chr11 19978531 19980659 + 5.6714257551237 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 55153 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak2_97_928_-0.356046238285613_9.68151166723985_5.6714257551237-2 chr8 70838576 70840669 + 5.6714257551237 NA promoter-TSS (NM_027560) promoter-TSS (NM_027560) 98 NM_027560 70807 Mm.24215 NM_027560 ENSMUSG00000002910 Arrdc2 4632416I05Rik|Ilad1 arrestin domain containing 2 protein-coding unique_peak2_11_120_-1.13170008036886_6.35301319709017_5.67131816465746-2 chrX 167021635 167022610 + 5.67131816465746 NA Intergenic B1F|SINE|Alu 48248 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding unique_peak2_11_120_-1.13170008036886_6.35301319709017_5.67131816465746 chr10 78169893 78170555 + 5.67131816465746 NA promoter-TSS (NM_138601) promoter-TSS (NM_138601) -456 NM_138601 28295 Mm.268691 NM_138601 ENSMUSG00000053329 D10Jhu81e C21orf33|ES1 DNA segment, Chr 10, Johns Hopkins University 81 expressed protein-coding common_peak1_187_1909_-0.24300121312438_10.7778563163609_5.67127813894952 chr17 47610307 47612154 + 5.67127813894952 NA promoter-TSS (NM_020048) promoter-TSS (NM_020048) 262 NM_016859 53414 Mm.472101 NM_016859 ENSMUSG00000023988 Bysl Bys|Enp1 bystin-like protein-coding common_peak2_176_1239_0.27353651592087_10.4128926632347_5.67038524431211 chr2 173408463 173410983 + 5.67038524431211 NA Intergenic Intergenic -112869 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding common_peak2_62_579_-0.458299930063152_8.95075912498336_5.67028680252314 chr10 118795939 118798206 + 5.67028680252314 NA Intergenic Intergenic 71831 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_35_327_-0.626254331559061_8.04442483883855_5.67017085970656 chr9 50603915 50604439 + 5.67017085970656 NA promoter-TSS (NM_025848) promoter-TSS (NM_025848) 276 NM_013897 30057 Mm.335149 NM_013897 ENSMUSG00000039016 Timm8b Tim8b translocase of inner mitochondrial membrane 8B protein-coding common_peak2_35_327_-0.626254331559061_8.04442483883855_5.67017085970656 chrX 74367832 74369432 + 5.67017085970656 NA promoter-TSS (NM_145405) promoter-TSS (NM_145405) -84 NM_145405 27643 Mm.3979 NM_145405 ENSMUSG00000015290 Ubl4a DXHXS254E|DXS254E|DXS254Eh|Gdx|Ubl4 ubiquitin-like 4A protein-coding unique_peak1_12_18_1.68088142001099_5.08836822344908_5.66988446868992-2 chr6 54928683 54929077 + 5.66988446868992 NA intron (NM_172729, intron 10 of 11) intron (NM_172729, intron 10 of 11) 42781 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding unique_peak1_12_18_1.68088142001099_5.08836822344908_5.66988446868992 chr3 30861505 30861873 + 5.66988446868992 NA intron (NM_001286994, intron 1 of 3) Lx8b|LINE|L1 5739 NM_001286994 71862 Mm.272019 NM_027965 ENSMUSG00000037661 Gpr160 1700025D19Rik|GPCR150 G protein-coupled receptor 160 protein-coding common_peak2_70_657_-0.428784227888224_9.14755165979113_5.66831313326114 chr9 123477973 123479776 + 5.66831313326114 NA 5' UTR (NM_013860, exon 1 of 8) 5' UTR (NM_013860, exon 1 of 8) 173 NM_013860 29806 Mm.10987 NM_013860 ENSMUSG00000025239 Limd1 AW822033|D9Ertd192e LIM domains containing 1 protein-coding common_peak1_44_409_-0.553301461940814_8.40282936853504_5.66722719478782 chr7 64373512 64374078 + 5.66722719478782 NA intron (NM_177893, intron 1 of 13) intron (NM_177893, intron 1 of 13) 300 NM_177893 330554 Mm.236510 NM_177893 ENSMUSG00000033458 Fan1 6030441H18Rik|Mtmr15|mFAN1 FANCD2/FANCI-associated nuclease 1 protein-coding common_peak1_189_1363_0.261454172437395_10.5443550152429_5.66711890814214 chr6 38433845 38435187 + 5.66711890814214 NA exon (NM_177185, exon 1 of 17) exon (NM_177185, exon 1 of 17) 591 NM_177185 320538 Mm.302831 NM_177185 ENSMUSG00000038538 Ubn2 2900060J04Rik|6030408G03Rik|BC060116|D130059P03Rik|mKIAA2030 ubinuclein 2 protein-coding common_peak1_264_2820_-0.198143598264137_11.3629191514535_5.66586103186313 chr12 105008233 105010601 + 5.66586103186313 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 392 NM_172500 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_25_71_0.98549624319862_6.66267312304162_5.6652976875873 chr1 151960848 151961436 + 5.6652976875873 NA intron (NM_197990, intron 3 of 5) intron (NM_197990, intron 3 of 5) 129178 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak1_25_71_0.98549624319862_6.66267312304162_5.6652976875873-2 chr4 128609395 128609916 + 5.6652976875873 NA intron (NM_177758, intron 1 of 7) intron (NM_177758, intron 1 of 7) 443 NM_177758 269585 Mm.153291 NM_177758 ENSMUSG00000061894 Zscan20 C130001F22|Zfp31|Zkscan20 zinc finger and SCAN domains 20 protein-coding common_peak2_109_645_0.372512974878347_9.5216468421331_5.66487578287596 chr15 77788295 77791022 + 5.66487578287596 NA intron (NM_022410, intron 10 of 40) PB1D11|SINE|Alu -34429 NM_001081970 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding common_peak2_47_192_0.647930742010371_7.91642240827327_5.66466776953008 chr5 92498809 92500357 + 5.66466776953008 NA intron (NM_007644, intron 1 of 11) intron (NM_007644, intron 1 of 11) 6074 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding common_peak1_265_2133_0.211168163024292_11.1649285423366_5.66346182501229 chr7 72305629 72308441 + 5.66346182501229 NA promoter-TSS (NM_001024703) promoter-TSS (NM_001024703) -440 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak2_138_1361_-0.28952620721947_10.2667478844023_5.66265216673633 chr7 44747568 44749577 + 5.66265216673633 NA promoter-TSS (NM_133945) promoter-TSS (NM_133945) 45 NM_178734 243963 Mm.382935 NM_178734 ENSMUSG00000048012 Zfp473 D030014N22Rik|Znf473|zfp-100 zinc finger protein 473 protein-coding common_peak1_112_1083_-0.32662954318147_9.91883426976313_5.66141597091946 chr9 123529722 123530747 + 5.66141597091946 NA intron (NM_030692, intron 1 of 19) intron (NM_030692, intron 1 of 19) 352 NM_030692 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding common_peak1_183_1863_-0.245888407001701_10.7412419411534_5.66065263708843 chr9 40799364 40801043 + 5.66065263708843 NA Intergenic Intergenic -1070 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding common_peak2_122_1189_-0.311168076976596_10.061161819707_5.65910304507671 chr2 102871970 102875269 + 5.65910304507671 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 28046 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_186_1334_0.264293647527108_10.5147708503385_5.6585493174335 chr11 103176549 103178920 + 5.6585493174335 NA intron (NM_019679, intron 1 of 26) intron (NM_019679, intron 1 of 26) 6596 NM_019679 57778 Mm.138913 NM_019679 ENSMUSG00000055805 Fmnl1 8030453N10Rik|AI553564|Fmnl|Fnrl|Frls formin-like 1 protein-coding common_peak1_32_106_0.835852961259733_7.15939346703101_5.65806812303592 chr8 40595958 40596858 + 5.65806812303592 NA intron (NM_001040699, intron 4 of 13) intron (NM_001040699, intron 4 of 13) 38384 NM_001040699 54384 Mm.294871 NM_019433 ENSMUSG00000039431 Mtmr7 - myotubularin related protein 7 protein-coding common_peak1_424_3936_0.156866437571772_12.0213142159449_5.65629538468805 chr5 103752427 103755013 + 5.65629538468805 NA promoter-TSS (NM_133919) promoter-TSS (NM_133919) -442 NM_133919 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_42_162_0.696999016022874_7.69722766224251_5.65618798030319 chr3 123173888 123175048 + 5.65618798030319 NA intron (NM_080451, intron 1 of 4) intron (NM_080451, intron 1 of 4) 61681 NM_080451 118449 Mm.34359 NM_080451 ENSMUSG00000050315 Synpo2 1110069I04Rik|2310068J10Rik|9530006G20Rik|AI848603|Myo synaptopodin 2 protein-coding common_peak1_42_162_0.696999016022874_7.69722766224251_5.65618798030319 chr1 138134201 138134965 + 5.65618798030319 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 40543 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_60_560_-0.467337509561821_8.89818820582788_5.65496644551622 chr2 101799000 101799804 + 5.65496644551622 NA intron (NM_001110849, intron 2 of 9) MT2B|LTR|ERVL -1695 NM_001083810 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_30_283_-0.683064914770375_7.80821466211949_5.65305482698519 chr1 127319451 127319983 + 5.65305482698519 NA intron (NM_145128, intron 3 of 17) intron (NM_145128, intron 3 of 17) 114731 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_30_283_-0.683064914770375_7.80821466211949_5.65305482698519-2 chr11 70621844 70622510 + 5.65305482698519 NA Intergenic Intergenic -2983 NM_009603 11448 Mm.4980 NM_009603 ENSMUSG00000014609 Chrne AChrepsilon|Acre|nAChRE cholinergic receptor, nicotinic, epsilon polypeptide protein-coding common_peak2_71_666_-0.423632966939206_9.16972646771498_5.65266855157502 chr5 25222064 25223914 + 5.65266855157502 NA promoter-TSS (NM_144908) promoter-TSS (NM_144908) 96 NM_144908 231050 Mm.21814 NM_144908 ENSMUSG00000038072 Galnt11 A430075I06Rik|AI648252|E430002F06Rik UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 protein-coding common_peak2_71_666_-0.423632966939206_9.16972646771498_5.65266855157502-2 chr7 131362063 131363591 + 5.65266855157502 NA promoter-TSS (NM_026655) promoter-TSS (NM_026655) -129 NM_026655 68277 Mm.121122 NM_026655 ENSMUSG00000040177 2310057M21Rik 3110040E10Rik|AI429544 RIKEN cDNA 2310057M21 gene protein-coding common_peak1_329_2832_0.183922959347459_11.5600763660518_5.65244429089577 chr6 113076513 113078710 + 5.65244429089577 NA promoter-TSS (NM_028385) promoter-TSS (NM_028385) -28 NM_028385 72895 Mm.367159 NM_028385 ENSMUSG00000034269 Setd5 2900045N06Rik|C330007C20|C85544|mKIAA1757 SET domain containing 5 protein-coding common_peak2_325_2787_0.185441909239303_11.5377358004881_5.65189341143328 chr5 28315221 28318140 + 5.65189341143328 NA promoter-TSS (NM_028234) promoter-TSS (NM_028234) -509 NM_028234 381626 Mm.304075 NM_028234 ENSMUSG00000048271 Rbm33 3200001K10Rik|6430512A10Rik|AA386890|Prr8 RNA binding motif protein 33 protein-coding common_peak2_74_696_-0.414865137578756_9.23758227707905_5.65049160778527 chr17 25239495 25241067 + 5.65049160778527 NA promoter-TSS (NM_172529) promoter-TSS (NM_172529) 111 NM_026676 68327 Mm.180687 NM_026676 ENSMUSG00000015126 Tsr3 0610007P22Rik|1110014B11Rik|AL022759 TSR3 20S rRNA accumulation protein-coding common_peak1_114_1104_-0.323264263306964_9.94819852262531_5.64962771785576 chr7 45135544 45137213 + 5.64962771785576 NA promoter-TSS (NM_013520) promoter-TSS (NM_013520) 54 NM_013520 14256 Mm.1658 NM_013520 ENSMUSG00000110206 Flt3l Flt3lg|Ly72L FMS-like tyrosine kinase 3 ligand protein-coding unique_peak1_17_36_1.29523199624372_5.85706936375081_5.64842361242494-4 chr8 75093563 75094035 + 5.64842361242494 NA intron (NM_010442, intron 1 of 4) intron (NM_010442, intron 1 of 4) 181 NM_010442 15368 Mm.276389 NM_010442 ENSMUSG00000005413 Hmox1 D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32 heme oxygenase 1 protein-coding common_peak1_17_36_1.29523199624372_5.85706936375081_5.64842361242494-2 chr9 21251249 21251663 + 5.64842361242494 NA Intergenic Intergenic -3013 NM_053190 94226 Mm.190619 NM_053190 ENSMUSG00000045087 S1pr5 Edg8|S1P5|lpB4 sphingosine-1-phosphate receptor 5 protein-coding unique_peak1_17_36_1.29523199624372_5.85706936375081_5.64842361242494-3 chr6 99655645 99656098 + 5.64842361242494 NA intron (NM_025829, intron 1 of 6) ORR1E|LTR|ERVL-MaLR 10900 NM_025829 66892 Mm.32889 NM_025829 ENSMUSG00000093661 Eif4e3 1300018P11Rik|AI451927|eIF4E-3 eukaryotic translation initiation factor 4E member 3 protein-coding common_peak1_17_36_1.29523199624372_5.85706936375081_5.64842361242494 chr8 69184587 69185034 + 5.64842361242494 NA Intergenic PB1D11|SINE|Alu -24236 NM_001013379 234358 Mm.334577 NM_001013379 ENSMUSG00000059897 Zfp930 - zinc finger protein 930 protein-coding unique_peak1_17_36_1.29523199624372_5.85706936375081_5.64842361242494-2 chr3 67463392 67463728 + 5.64842361242494 NA intron (NM_016753, intron 1 of 5) intron (NM_016753, intron 1 of 5) 347 NM_016753 17035 Mm.2632 NM_016753 ENSMUSG00000047557 Lxn - latexin protein-coding unique_peak1_17_36_1.29523199624372_5.85706936375081_5.64842361242494-5 chr9 66110496 66110968 + 5.64842361242494 NA intron (NM_019727, intron 1 of 14) intron (NM_019727, intron 1 of 14) 14154 NM_019727 56440 Mm.271891 NM_019727 ENSMUSG00000032382 Snx1 - sorting nexin 1 protein-coding unique_peak1_17_36_1.29523199624372_5.85706936375081_5.64842361242494 chr11 95342406 95342835 + 5.64842361242494 NA intron (NM_172543, intron 1 of 7) MTE2b|LTR|ERVL-MaLR 5602 NM_172543 215512 Mm.262113 NM_172543 ENSMUSG00000038893 Fam117a 5730593F17Rik|AW548096 family with sequence similarity 117, member A protein-coding common_peak1_56_521_-0.483407277019712_8.78620235806003_5.64595241940556 chr12 84417153 84417960 + 5.64595241940556 NA exon (NM_025525, exon 1 of 1) exon (NM_025525, exon 1 of 1) 356 NM_025525 66381 Mm.24846 NM_025525 ENSMUSG00000098134 Rnf113a2 2310020H19Rik|AI426758|Rnf113a ring finger protein 113A2 protein-coding common_peak1_36_128_0.768556395788156_7.39550545331733_5.64575748913177-2 chr3 101292929 101293582 + 5.64575748913177 NA Intergenic Intergenic -5316 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding common_peak1_36_128_0.768556395788156_7.39550545331733_5.64575748913177 chr10 76269276 76270023 + 5.64575748913177 NA intron (NM_001081419, intron 34 of 37) intron (NM_001081419, intron 34 of 37) 15813 NM_009115 20203 Mm.235998 NM_009115 ENSMUSG00000033208 S100b AI850290|Bpb S100 protein, beta polypeptide, neural protein-coding common_peak2_58_541_-0.476622636312046_8.84383772319785_5.6427201281892 chr18 39034362 39036659 + 5.6427201281892 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 42365 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_48_446_-0.527254784272634_8.540503629047_5.64270139296155 chr11 9530784 9531732 + 5.64270139296155 NA intron (NM_178259, intron 45 of 61) B1_Mur3|SINE|Alu 339316 NM_178259 268379 Mm.39270 NM_178259 ENSMUSG00000004668 Abca13 9830132L24|A930002G16Rik|AI956815 ATP-binding cassette, sub-family A (ABC1), member 13 protein-coding common_peak2_29_274_-0.694631375814319_7.75597212050486_5.64028018667336 chr2 26337216 26338421 + 5.64028018667336 NA intron (NM_153410, intron 9 of 13) IAPEz-int|LTR|ERVK 14292 NM_026828 52838 Mm.31239 NM_026828 ENSMUSG00000075467 Dnlz 1110034G11Rik|D2Bwg1335e|HEP1 DNL-type zinc finger protein-coding common_peak1_29_274_-0.694631375814319_7.75597212050486_5.64028018667336 chr19 11355891 11356539 + 5.64028018667336 NA Intergenic Intergenic -19273 NM_001310331 666907 NM_001310331 ENSMUSG00000101389 Ms4a4a EG666907 membrane-spanning 4-domains, subfamily A, member 4A protein-coding common_peak2_158_1072_0.292441920839876_10.2136553211765_5.64005120468781 chr6 108530940 108533091 + 5.64005120468781 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 42272 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_86_815_-0.379627511305642_9.48261158631867_5.63857749418769 chr5 124050816 124052196 + 5.63857749418769 NA Intergenic MT2B|LTR|ERVL -19246 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak2_297_3226_-0.184440549192965_11.5637575878905_5.63830999355705 chr11 53783445 53788821 + 5.63830999355705 NA non-coding (NR_033332, exon 4 of 4) non-coding (NR_033332, exon 4 of 4) 15660 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding unique_peak2_15_154_-0.97987114214907_6.7861888341997_5.63782060706948 chr8 120403499 120404696 + 5.63782060706948 NA Intergenic Intergenic -84769 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_108_1041_-0.333397326748871_9.85844089890407_5.63633101827281 chr2 71833682 71834880 + 5.63633101827281 NA intron (NM_001277970, intron 11 of 24) intron (NM_001277970, intron 11 of 24) -38943 NM_172665 228026 Mm.34411 NM_172665 ENSMUSG00000006494 Pdk1 B830012B01|D530020C15Rik pyruvate dehydrogenase kinase, isoenzyme 1 protein-coding common_peak2_250_1977_0.217970770054889_11.0588120957866_5.63461838834334 chr8 11634472 11637050 + 5.63461838834334 NA promoter-TSS (NM_133971) promoter-TSS (NM_133971) -4 NM_001281974 102334 Mm.12459 NM_133971 ENSMUSG00000031508 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 protein-coding common_peak2_129_1264_-0.30139483806242_10.1542242505505_5.63441777154633 chr7 16051632 16053976 + 5.63441777154633 NA Intergenic CpG -19138 NM_001099277 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak1_44_174_0.674967525732303_7.78869487469848_5.63427443414057 chr11 120098058 120098829 + 5.63427443414057 NA promoter-TSS (NM_001110242) promoter-TSS (NM_001110242) 288 NM_183137 78777 Mm.23672 NM_183137 ENSMUSG00000025377 Tepsin 2410002I01Rik|Enthd2 TEPSIN, adaptor related protein complex 4 accessory protein protein-coding common_peak2_44_174_0.674967525732303_7.78869487469848_5.63427443414057 chr5 92093038 92094390 + 5.63427443414057 NA Intergenic Intergenic -9970 NM_001080795 23881 Mm.290530 NM_011816 ENSMUSG00000029405 G3bp2 AA409541|E430034L04Rik|G3BP|mKIAA0660 GTPase activating protein (SH3 domain) binding protein 2 protein-coding common_peak1_124_771_0.341663741746624_9.76328890814139_5.63344109332354 chr16 75766223 75767861 + 5.63344109332354 NA promoter-TSS (NR_027492) promoter-TSS (NR_027492) -224 NM_030201 110920 Mm.26704 NM_030201 ENSMUSG00000032932 Hspa13 1600002I10Rik|AV006182|B230217N24Rik|Stch heat shock protein 70 family, member 13 protein-coding common_peak2_99_565_0.394581571677213_9.34194902867049_5.63293404899213 chr3 63975537 63977071 + 5.63293404899213 NA exon (NM_001033300, exon 1 of 16) exon (NM_001033300, exon 1 of 16) 161 NM_001033300 229363 Mm.331051 NM_001033300 ENSMUSG00000027823 Gmps 670032|AA591640|AI047208|Gm9479 guanine monophosphate synthetase protein-coding unique_peak1_14_25_1.48160440327026_5.44124191977622_5.63288315846384 chr11 70891997 70892506 + 5.63288315846384 NA intron (NM_001291142, intron 4 of 16) Kanga2_a|DNA|TcMar-Tc2 47490 NM_001291142 54189 Mm.7087 NM_019400 ENSMUSG00000020817 Rabep1 Rab5ep|rabaptin-5|rabaptin-5alpha rabaptin, RAB GTPase binding effector protein 1 protein-coding unique_peak1_14_25_1.48160440327026_5.44124191977622_5.63288315846384-2 chr12 116467360 116467772 + 5.63288315846384 NA Intergenic Intergenic -18154 NM_011215 19276 Mm.206054 NM_011215 ENSMUSG00000056553 Ptprn2 4930425H11Rik|IA2beta|PTP-NP|Phol|mKIAA0387|phogrin protein tyrosine phosphatase, receptor type, N polypeptide 2 protein-coding common_peak1_35_122_0.788783167719783_7.33690608919913_5.63283049158564 chr15 100304726 100305352 + 5.63283049158564 NA exon (NM_027334, exon 1 of 2) exon (NM_027334, exon 1 of 2) 222 NM_027334 70152 Mm.488086 NM_027334 ENSMUSG00000054619 Mettl7a1 2210414H16Rik|3300001H21Rik|Aam-B|Mettl7a|UbiE1 methyltransferase like 7A1 protein-coding common_peak2_35_122_0.788783167719783_7.33690608919913_5.63283049158564 chr13 100246782 100247534 + 5.63283049158564 NA intron (NM_010870, intron 1 of 14) intron (NM_010870, intron 1 of 14) 178 NM_010870 17951 Mm.290476 NM_010870 ENSMUSG00000071203 Naip5 Birc1e|Lgn1|Naip-rs3 NLR family, apoptosis inhibitory protein 5 protein-coding common_peak2_50_465_-0.516515367526823_8.60592846089087_5.6327188351873 chr17 30841507 30843353 + 5.6327188351873 NA intron (NM_013811, intron 88 of 92) L2a|LINE|L2 -59437 NM_021332 14652 Mm.390969 NM_021332 ENSMUSG00000024027 Glp1r GLP-1R|GLP1Rc glucagon-like peptide 1 receptor protein-coding common_peak1_553_5542_0.132381067946911_12.5026418262604_5.63264124874351 chr10 60346601 60352809 + 5.63264124874351 NA intron (NM_001159572, intron 1 of 6) intron (NM_001159572, intron 1 of 6) 2854 NM_028732 74048 Mm.273584 NM_028732 ENSMUSG00000020101 Vsir 4632428N05Rik|Dies1|PD-1H|VISTA V-set immunoregulatory receptor protein-coding common_peak1_241_2541_-0.208569159183154_11.2074637354134_5.63153297326379 chr17 6781144 6783562 + 5.63153297326379 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 427 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_201_1481_0.250130772485978_10.6583951185488_5.63094125433192 chr3 101295144 101298559 + 5.63094125433192 NA Intergenic L2a|LINE|L2 -8912 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding common_peak1_28_265_-0.706619120988621_7.70197287500688_5.63067111330957 chr12 69386212 69386927 + 5.63067111330957 NA Intergenic (A)n|Simple_repeat|Simple_repeat 14419 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak2_265_2134_0.210492269340865_11.1652664891783_5.63049631726317 chr11 69979427 69981996 + 5.63049631726317 NA promoter-TSS (NM_001253700) promoter-TSS (NM_001253700) -381 NM_001253700 54351 Mm.13430 NM_018740 ENSMUSG00000018565 Elp5 Derp6|Rai12 elongator acetyltransferase complex subunit 5 protein-coding common_peak1_91_866_-0.368202756755611_9.57578680484403_5.62896536025545 chr9 123936864 123938252 + 5.62896536025545 NA Intergenic Intergenic 31134 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding common_peak2_65_311_0.518530039984988_8.54466723885474_5.62845266718704 chr12 32163143 32164717 + 5.62845266718704 NA Intergenic Intergenic 44408 NM_001146201 30955 Mm.101369 NM_020272 ENSMUSG00000020573 Pik3cg 5830428L06Rik|PI3Kgamma|p110gamma phosphoinositide-3-kinase, catalytic, gamma polypeptide protein-coding common_peak1_77_397_0.462931140250568_8.86809019066893_5.62743914575158 chr16 87495212 87495951 + 5.62743914575158 NA promoter-TSS (NR_040375) promoter-TSS (NR_040375) 288 NM_009840 12469 Mm.328673 NM_009840 ENSMUSG00000025613 Cct8 AI132397|Cctq|Tcpq chaperonin containing Tcp1, subunit 8 (theta) protein-coding common_peak1_262_2794_-0.198191548455091_11.349536793503_5.62650483923087 chr2 9875795 9878728 + 5.62650483923087 NA intron (NM_008091, intron 2 of 5) intron (NM_008091, intron 2 of 5) 1339 NM_008091 14462 Mm.313866 NM_008091 ENSMUSG00000015619 Gata3 Gata-3|jal GATA binding protein 3 protein-coding common_peak1_547_5465_0.133292434384366_12.4829159617154_5.62549967287023 chr11 51855560 51859662 + 5.62549967287023 NA promoter-TSS (NM_199299) promoter-TSS (NM_199299) -130 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak1_37_345_-0.607651713053479_8.13080237110999_5.62511642896983-2 chrX 7840695 7841224 + 5.62511642896983 NA promoter-TSS (NM_138604) promoter-TSS (NM_138604) -872 NM_001290536 54644 Mm.142827 NM_138604 ENSMUSG00000031154 Otud5 AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7 OTU domain containing 5 protein-coding unique_peak2_37_345_-0.607651713053479_8.13080237110999_5.62511642896983 chr16 20498165 20499575 + 5.62511642896983 NA promoter-TSS (NM_172265) promoter-TSS (NM_172265) 53 NM_172265 224045 Mm.233855 NM_172265 ENSMUSG00000003235 Eif2b5 C81315 eukaryotic translation initiation factor 2B, subunit 5 epsilon protein-coding common_peak1_37_345_-0.607651713053479_8.13080237110999_5.62511642896983 chr6 34877700 34878148 + 5.62511642896983 NA 5' UTR (NM_199145, exon 1 of 4) 5' UTR (NM_199145, exon 1 of 4) 141 NM_199145 78412 Mm.248440 NM_199145 ENSMUSG00000046806 3110062M04Rik AL023049|Mri RIKEN cDNA 3110062M04 gene protein-coding common_peak1_79_745_-0.398672970251749_9.34369533512936_5.62474875548292 chr15 78835357 78836331 + 5.62474875548292 NA Intergenic Intergenic -6803 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding unique_peak2_13_137_-1.0485720179466_6.58423844780487_5.62432443761594-2 chr9 107776418 107777568 + 5.62432443761594 NA intron (NM_029169, intron 19 of 20) intron (NM_029169, intron 19 of 20) -5991 NM_148930 83486 Mm.259197 NM_148930 ENSMUSG00000032580 Rbm5 D030069N10Rik RNA binding motif protein 5 protein-coding unique_peak2_13_137_-1.0485720179466_6.58423844780487_5.62432443761594 chr7 30098972 30099867 + 5.62432443761594 NA intron (NM_011981, intron 1 of 2) intron (NM_011981, intron 1 of 2) 4343 NM_011981 26466 Mm.195092 NM_011981 ENSMUSG00000049421 Zfp260 AI480997|Ozrf1|PEX1|Zfp63|Znf260 zinc finger protein 260 protein-coding unique_peak2_21_204_-0.819682356811495_7.2696389210997_5.62431645097394 chr7 109616072 109617341 + 5.62431645097394 NA promoter-TSS (NR_037617) promoter-TSS (NR_037617) -138 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak1_71_353_0.490304434162383_8.71275776716419_5.62403565526664 chr7 99545665 99546719 + 5.62403565526664 NA intron (NM_177231, intron 1 of 15) intron (NM_177231, intron 1 of 15) -6077 NR_029760 723840 NR_029760 ENSMUSG00000065571 Mir326 Mirn326|mir-326|mmu-mir-326 microRNA 326 ncRNA common_peak1_26_247_-0.73198874354728_7.58820193861323_5.62251610066394 chr11 51915822 51916385 + 5.62251610066394 NA Intergenic Intergenic -51528 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_74_375_0.475560856612029_8.79236927998365_5.62192445015884 chr7 19603882 19604545 + 5.62192445015884 NA intron (NR_125834, intron 1 of 19) CpG 148 NR_125835 53609 Mm.20913 NM_016680 ENSMUSG00000061028 Clasrp Clasp|Sfrs16|Srsf16|Swap2 CLK4-associating serine/arginine rich protein protein-coding common_peak1_219_2279_-0.220302468293477_11.0446668749054_5.62124424651768 chr11 69394744 69396536 + 5.62124424651768 NA promoter-TSS (NM_001045525) promoter-TSS (NM_001045525) -151 NM_030083 78304 Mm.45683 NM_030083 ENSMUSG00000059278 Naa38 1500034E06Rik|Lsmd1 N(alpha)-acetyltransferase 38, NatC auxiliary subunit protein-coding unique_peak2_20_196_-0.844577175657879_7.19976323162744_5.62083751875281 chr1 138129962 138131293 + 5.62083751875281 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 44499 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_20_196_-0.844577175657879_7.19976323162744_5.62083751875281-2 chr17 26753540 26754152 + 5.62083751875281 NA intron (NM_029870, intron 4 of 8) intron (NM_029870, intron 4 of 8) -27233 NM_172149 224630 Mm.21795 NM_172149 ENSMUSG00000024191 Bnip1 2010005M06Rik|5930429G21Rik|Sec20 BCL2/adenovirus E1B interacting protein 1 protein-coding common_peak1_20_196_-0.844577175657879_7.19976323162744_5.62083751875281 chr16 75909234 75909634 + 5.62083751875281 NA promoter-TSS (NM_023380) promoter-TSS (NM_023380) -168 NM_023380 67742 Mm.131406 NM_023380 ENSMUSG00000022876 Samsn1 4930571B16Rik|930571B16Rik|Hacs1|SLy2 SAM domain, SH3 domain and nuclear localization signals, 1 protein-coding common_peak2_207_1540_0.245607031685214_10.7124546623574_5.61968861883495 chr14 25854819 25859071 + 5.61968861883495 NA intron (NM_013469, intron 1 of 14) HAL1|LINE|L1 14790 NM_013469 11744 Mm.294083 NM_013469 ENSMUSG00000021866 Anxa11 A830099O17Rik|Anx11 annexin A11 protein-coding common_peak2_229_1761_0.23018049323777_10.8980884555393_5.61829983116488 chr5 136145986 136150170 + 5.61829983116488 NA 3' UTR (NM_178751, exon 3 of 3) 3' UTR (NM_178751, exon 3 of 3) 9297 NM_028070 72041 Mm.486605 NM_028070 ENSMUSG00000039754 Alkbh4 2010004B12Rik|Abj4 alkB homolog 4, lysine demethylase protein-coding common_peak1_59_550_-0.470639764787098_8.87058862617761_5.6161039957931 chr4 141444449 141445422 + 5.6161039957931 NA intron (NM_009541, intron 1 of 15) CpG 262 NM_009541 22642 Mm.389590 NM_009541 ENSMUSG00000006215 Zbtb17 AA589413|Lp-1|Miz1|Zfp100|mZ13 zinc finger and BTB domain containing 17 protein-coding common_peak2_533_5287_0.135258734596135_12.4361358288058_5.61552710245054 chr2 101794841 101800321 + 5.61552710245054 NA 5' UTR (NM_001083810, exon 1 of 9) 5' UTR (NM_001083810, exon 1 of 9) 126 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak2_156_1558_-0.268929578292136_10.4719404235517_5.61518909729733 chr3 60525624 60529348 + 5.61518909729733 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 26307 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_23_221_-0.780640398258011_7.4040956672211_5.61447806847343 chr12 113151485 113152062 + 5.61447806847343 NA promoter-TSS (NM_007763) promoter-TSS (NM_007763) -239 NM_007763 12925 Mm.272368 NM_007763 ENSMUSG00000006360 Crip1 CRHP|CRP1|Crip cysteine-rich protein 1 (intestinal) protein-coding common_peak1_23_221_-0.780640398258011_7.4040956672211_5.61447806847343-2 chr6 70824378 70824911 + 5.61447806847343 NA Intergenic Intergenic -19871 NM_010121 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak1_47_436_-0.531101690222147_8.50593862438953_5.61377786444022 chr10 79767086 79767754 + 5.61377786444022 NA promoter-TSS (NR_027505) promoter-TSS (NR_027505) -468 NR_027505 70294 Mm.466670 NM_144528 ENSMUSG00000035890 Rnf126 2610010O19Rik ring finger protein 126 protein-coding common_peak2_38_139_0.743660432662894_7.50111323327641_5.61339198298114 chr7 80299119 80300242 + 5.61339198298114 NA intron (NM_001285997, intron 1 of 13) intron (NM_001285997, intron 1 of 13) 5229 NM_001285998 233406 Mm.227274 NM_145150 ENSMUSG00000038943 Prc1 D7Ertd348e protein regulator of cytokinesis 1 protein-coding common_peak2_38_139_0.743660432662894_7.50111323327641_5.61339198298114-3 chr8 124284114 124285004 + 5.61339198298114 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 53165 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_38_139_0.743660432662894_7.50111323327641_5.61339198298114-2 chr7 101363007 101363839 + 5.61339198298114 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) -14699 NM_001040112 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_98_937_-0.351989648701212_9.69744928816477_5.61332500635972 chr11 52318572 52319702 + 5.61332500635972 NA Intergenic Intergenic -36123 NM_001313981 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak2_90_495_0.418148732333172_9.16327067655346_5.61229600377397 chr13 58384537 58385870 + 5.61229600377397 NA promoter-TSS (NM_027335) promoter-TSS (NM_027335) 22 NM_027335 70153 Mm.296610 NM_027335 ENSMUSG00000021550 2210016F16Rik - RIKEN cDNA 2210016F16 gene protein-coding common_peak1_277_2263_0.203938849147075_11.2466276674054_5.61156238255086 chr13 55692381 55693861 + 5.61156238255086 NA promoter-TSS (NM_181278) promoter-TSS (NM_181278) -3 NM_181278 78521 Mm.28449 NM_181278 ENSMUSG00000045767 B230219D22Rik AA119856|D530037I19Rik RIKEN cDNA B230219D22 gene protein-coding common_peak1_18_40_1.24281219877881_5.97895810400749_5.61067957814592-3 chr5 113138857 113139182 + 5.61067957814592 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 24294 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak1_18_40_1.24281219877881_5.97895810400749_5.61067957814592-5 chr7 80859614 80860089 + 5.61067957814592 NA Intergenic Intergenic -2257 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak1_18_40_1.24281219877881_5.97895810400749_5.61067957814592 chr10 39385516 39385874 + 5.61067957814592 NA intron (NM_008054, intron 1 of 13) intron (NM_008054, intron 1 of 13) 15896 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_18_40_1.24281219877881_5.97895810400749_5.61067957814592-2 chr18 38186085 38186525 + 5.61067957814592 NA Intergenic Intergenic 23457 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak1_18_40_1.24281219877881_5.97895810400749_5.61067957814592-4 chr5 148818796 148819353 + 5.61067957814592 NA Intergenic Intergenic 41111 NR_131106 78015 Mm.243839 NR_131106 ENSMUSG00000085740 4930505K14Rik - RIKEN cDNA 4930505K14 gene ncRNA common_peak2_55_511_-0.486822938795719_8.75658853060214_5.60968468952406 chr7 45465956 45467451 + 5.60968468952406 NA intron (NM_007527, intron 1 of 5) CpG 195 NM_007527 12028 Mm.19904 NM_007527 ENSMUSG00000003873 Bax - BCL2-associated X protein protein-coding common_peak1_55_511_-0.486822938795719_8.75658853060214_5.60968468952406 chr4 145018275 145019190 + 5.60968468952406 NA intron (NM_001276465, intron 66 of 69) intron (NM_001276465, intron 66 of 69) 125595 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak2_123_1199_-0.308911863388863_10.0743627588014_5.60948667864137 chr3 30875569 30878019 + 5.60948667864137 NA intron (NM_001286994, intron 1 of 3) intron (NM_001286994, intron 1 of 3) 20844 NM_001286994 71862 Mm.272019 NM_027965 ENSMUSG00000037661 Gpr160 1700025D19Rik|GPCR150 G protein-coupled receptor 160 protein-coding common_peak1_93_886_-0.363046895688688_9.61126684645672_5.60786143275755 chr11 87986713 87988189 + 5.60786143275755 NA promoter-TSS (NM_001168472) promoter-TSS (NM_001168472) 82 NM_026556 68097 Mm.246436 NM_026556 ENSMUSG00000020483 Dynll2 1700064A15Rik|6720463E02Rik|C87222|DLC8|DLC8b|Dlc2 dynein light chain LC8-type 2 protein-coding common_peak2_80_755_-0.395900341228193_9.36429225360698_5.60720091910967 chr10 43220575 43221991 + 5.60720091910967 NA promoter-TSS (NM_001168289) promoter-TSS (NM_001168289) -203 NM_027772 71365 Mm.490430 NM_027772 ENSMUSG00000038240 Pdss2 5430420P03Rik|Gm60|Plmp|kd|mDLP1 prenyl (solanesyl) diphosphate synthase, subunit 2 protein-coding common_peak1_53_492_-0.496623958351961_8.69713185720193_5.6067284533229-2 chr8 94917592 94918346 + 5.6067284533229 NA intron (NM_001033533, intron 1 of 8) CpG 129 NM_001033533 234582 Mm.277871 NM_001033533 ENSMUSG00000063605 Ccdc102a BC027663|Gm586 coiled-coil domain containing 102A protein-coding common_peak1_53_492_-0.496623958351961_8.69713185720193_5.6067284533229 chr4 133910349 133910998 + 5.6067284533229 NA Intergenic CpG -22876 NM_009097 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_117_713_0.352358452199082_9.65595949012864_5.60618165282752 chr17 84854483 84856741 + 5.60618165282752 NA Intergenic Intergenic -64826 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak1_84_795_-0.384982772691158_9.44413323419807_5.60600498327634 chr11 115491380 115492611 + 5.60600498327634 NA promoter-TSS (NM_015807) promoter-TSS (NM_015807) -181 NM_015807 50773 Mm.390379 NM_015807 ENSMUSG00000020736 Nt5c Dnt|Dnt1|Umph-2|Umph2 5',3'-nucleotidase, cytosolic protein-coding common_peak2_133_849_0.325836980311015_9.89423752118057_5.60554238801644 chr16 13255803 13257334 + 5.60554238801644 NA promoter-TSS (NM_001122667) promoter-TSS (NM_001122667) 87 NM_001122667 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak1_233_1802_0.227506595515159_10.9299369791899_5.60515423669099 chr11 69880025 69882032 + 5.60515423669099 NA promoter-TSS (NM_153143) promoter-TSS (NM_153143) -43 NM_153143 216858 Mm.239498 NM_153143 ENSMUSG00000046731 Kctd11 AF465352|Ren potassium channel tetramerisation domain containing 11 protein-coding common_peak2_166_1147_0.281839679012272_10.3058267661818_5.60379930394496 chr17 79894686 79896313 + 5.60379930394496 NA intron (NM_019717, intron 1 of 12) CpG 624 NM_178050 56298 Mm.175403 NM_019717 ENSMUSG00000059811 Atl2 2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2 atlastin GTPase 2 protein-coding common_peak1_247_2612_-0.204972271026646_11.2490052738067_5.60284023642661 chr3 126595961 126598496 + 5.60284023642661 NA 5' UTR (NM_001025438, exon 1 of 19) 5' UTR (NM_001025438, exon 1 of 19) 277 NM_023813 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak2_24_230_-0.765733849279673_7.46888211677622_5.60262497672291 chr14 56571140 56571936 + 5.60262497672291 NA intron (NM_001014996, intron 1 of 16) CpG 308 NM_001014996 219103 Mm.212525 NM_001014996 ENSMUSG00000064128 Cenpj 4932437H03Rik|CPAP|Gm81|LAP|LIP1|Sas4 centromere protein J protein-coding common_peak2_172_1736_-0.253171507217843_10.6357962851015_5.60154156224523 chr5 90222902 90225415 + 5.60154156224523 NA promoter-TSS (NM_001163456) promoter-TSS (NM_001163456) -162 NM_001163456 231430 Mm.319697 NM_001033310 ENSMUSG00000035505 Cox18 BC038311 cytochrome c oxidase assembly protein 18 protein-coding common_peak2_66_318_0.513131086384854_8.5739781569573_5.60147747909179 chr6 54157642 54159487 + 5.60147747909179 NA intron (NM_001163640, intron 1 of 12) intron (NM_001163640, intron 1 of 12) -106294 NM_001311133 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding unique_peak2_16_162_-0.945191893256905_6.87613220760263_5.60133251115094 chr10 118109639 118110841 + 5.60133251115094 NA Intergenic Intergenic -31547 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak1_16_162_-0.945191893256905_6.87613220760263_5.60133251115094 chr14 51884904 51885370 + 5.60133251115094 NA intron (NM_001029990, intron 1 of 13) CpG 295 NM_001029990 52535 Mm.5750 NM_001029990 ENSMUSG00000004561 Mettl17 2310032K15Rik|D14Ertd209e|Mett11d1 methyltransferase like 17 protein-coding common_peak2_46_187_0.64854223574838_7.87885996955183_5.6006906104609 chr8 46920167 46921262 + 5.6006906104609 NA Intergenic Intergenic -66211 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak1_46_187_0.64854223574838_7.87885996955183_5.6006906104609 chr9 66795313 66796246 + 5.6006906104609 NA promoter-TSS (NM_177583) promoter-TSS (NM_177583) -356 NM_177583 208117 Mm.41291 NM_177583 ENSMUSG00000032375 Aph1b 2310057K14Rik|Aph1c aph1 homolog B, gamma secretase subunit protein-coding common_peak2_211_1580_0.242344735457454_10.7477940200871_5.60063864484526 chr4 155943039 155945416 + 5.60063864484526 NA promoter-TSS (NM_001284312) promoter-TSS (NM_001284312) 69 NM_001284312 140499 Mm.371673 NM_021402 ENSMUSG00000023286 Ube2j2 1200007B18Rik|2400008G19Rik|5730472G04Rik|AL022923|NCUBE-2|Ubc6|Ubc6p ubiquitin-conjugating enzyme E2J 2 protein-coding common_peak1_52_224_0.601960574226075_8.11476147833007_5.60040387112485 chr4 127076826 127077993 + 5.60040387112485 NA promoter-TSS (NM_001285888) promoter-TSS (NM_001285888) 26 NM_001285887 100177 Mm.276096 NM_177462 ENSMUSG00000042408 Zmym6 9330177P20Rik|AI593204|AI661340|D4Wsu24e|Zfp258 zinc finger, MYM-type 6 protein-coding common_peak1_206_2126_-0.227874481560594_10.9406670771804_5.60022128433227 chr9 27029231 27031102 + 5.60022128433227 NA promoter-TSS (NM_178027) promoter-TSS (NM_178027) -9 NM_178113 78658 Mm.251777 NM_178113 ENSMUSG00000035024 Ncapd3 2810487N22Rik|4632407J06Rik|AI195468|AU018739|B130055D15Rik|mKIAA0056 non-SMC condensin II complex, subunit D3 protein-coding common_peak2_244_1915_0.221099978052825_11.0144318347626_5.60005555163479 chr11 121353196 121355304 + 5.60005555163479 NA exon (NM_025793, exon 1 of 10) exon (NM_025793, exon 1 of 10) 197 NM_025793 66840 Mm.103986 NM_025793 ENSMUSG00000025173 Wdr45b 0610008N23Rik|AA408735|D16Bwg0193e|WIPI-3|Wdr45l WD repeat domain 45B protein-coding common_peak2_30_96_0.866769362547179_7.03329752346072_5.59912268764273 chr12 100999263 101000041 + 5.59912268764273 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 22116 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak1_30_96_0.866769362547179_7.03329752346072_5.59912268764273 chr13 62129675 62130332 + 5.59912268764273 NA 5' UTR (NM_001039239, exon 1 of 4) 5' UTR (NM_001039239, exon 1 of 4) 113 NM_001039239 630579 Mm.440905 NM_001039239 ENSMUSG00000074867 Zfp808 EG630579|Gm7036 zinc finger protein 80 protein-coding common_peak1_41_157_0.700306206807752_7.65393385158098_5.5983651008925 chr4 116596891 116597584 + 5.5983651008925 NA non-coding (NR_029450, exon 1 of 3) non-coding (NR_029450, exon 1 of 3) 393 NR_029450 654318 Mm.255685 NR_029450 ENSMUSG00000085408 C530005A16Rik D930044c15rik RIKEN cDNA C530005A16 gene ncRNA common_peak2_41_157_0.700306206807752_7.65393385158098_5.5983651008925 chr2 132114020 132114852 + 5.5983651008925 NA intron (NM_018824, intron 1 of 15) intron (NM_018824, intron 1 of 15) 30672 NM_018824 54338 Mm.103581 NM_018824 ENSMUSG00000027340 Slc23a2 AI844736|NBTL1|SVCT2|Slc23a1|YSPL2|YSPL3|mKIAA0238 solute carrier family 23 (nucleobase transporters), member 2 protein-coding common_peak2_102_590_0.384533563599208_9.39928110197713_5.59790629850382 chr11 116273311 116275025 + 5.59790629850382 NA promoter-TSS (NM_146032) promoter-TSS (NM_146032) 49 NM_146032 217337 Mm.29655 NM_146032 ENSMUSG00000020780 Srp68 2610024I03Rik signal recognition particle 68 protein-coding common_peak2_161_1101_0.287045885608077_10.2494314513752_5.59522670799205 chr3 142394442 142396465 + 5.59522670799205 NA intron (NM_019808, intron 1 of 12) CpG 243 NM_001190853 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak1_51_474_-0.509750147391022_8.6369086295228_5.59514085487399 chr7 31002910 31003493 + 5.59514085487399 NA Intergenic ID4_|SINE|ID 21280 NM_001242647 76415 Mm.259739 NM_175240 ENSMUSG00000046826 Fam187b 1700020B09Rik|Tmem162 family with sequence similarity 187, member B protein-coding common_peak1_36_336_-0.616821129970448_8.08819421619663_5.5951104490867-2 chr18 60848254 60848989 + 5.5951104490867 NA intron (NM_011552, intron 1 of 24) intron (NM_011552, intron 1 of 24) 343 NM_011552 21453 Mm.486251 NM_011552 ENSMUSG00000024613 Tcof1 AA408847|AW209012|treacle treacle ribosome biogenesis factor 1 protein-coding common_peak1_36_336_-0.616821129970448_8.08819421619663_5.5951104490867 chr14 66257382 66258040 + 5.5951104490867 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) 23341 NM_172498 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_325_2789_0.184407348391176_11.5382530809121_5.59433792930902 chr8 46843266 46845867 + 5.59433792930902 NA intron (NM_008391, intron 7 of 8) intron (NM_008391, intron 7 of 8) 104821 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_140_911_0.314375589414562_9.99007780887202_5.5919926762456 chr19 11765781 11767341 + 5.5919926762456 NA Intergenic Intergenic -3854 NM_025606 94063 Mm.203928 NM_025606 ENSMUSG00000024683 Mrpl16 2310039D06Rik mitochondrial ribosomal protein L16 protein-coding common_peak2_72_361_0.482473139302423_8.74108245673442_5.59174013334229 chr12 100778598 100780134 + 5.59174013334229 NA intron (NM_145448, intron 1 of 12) intron (NM_145448, intron 1 of 12) 243 NM_145448 217830 Mm.218590 NM_145448 ENSMUSG00000021185 9030617O03Rik - RIKEN cDNA 9030617O03 gene protein-coding common_peak1_39_363_-0.590048101381564_8.21277058950792_5.59159916300195 chr7 19119820 19120451 + 5.59159916300195 NA intron (NM_175530, intron 1 of 1) intron (NM_175530, intron 1 of 1) 276 NM_175530 243867 Mm.230830 NM_175530 ENSMUSG00000050428 Fbxo46 20D7-FC4|4932704E22Rik|Fbxo34l F-box protein 46 protein-coding common_peak1_261_2781_-0.19820713150901_11.3428031387877_5.59143747554766 chr18 80595672 80598843 + 5.59143747554766 NA Intergenic Intergenic -52711 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak1_19_44_1.1992811313011_6.09149366198023_5.59094306031235 chr1 64108746 64109224 + 5.59094306031235 NA intron (NM_033563, intron 1 of 3) intron (NM_033563, intron 1 of 3) 12404 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding common_peak1_19_44_1.1992811313011_6.09149366198023_5.59094306031235 chr15 66804106 66804652 + 5.59094306031235 NA intron (NM_001029841, intron 1 of 7) intron (NM_001029841, intron 1 of 7) 27450 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding unique_peak1_19_44_1.1992811313011_6.09149366198023_5.59094306031235-2 chr16 91917655 91918093 + 5.59094306031235 NA 3' UTR (NM_010587, exon 39 of 39) 3' UTR (NM_010587, exon 39 of 39) 13756 NM_138597 28080 Mm.41 NM_138597 ENSMUSG00000022956 Atp5o ATPO|D12Wsu28e|OSCP ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit protein-coding common_peak1_34_117_0.798802665161692_7.28204438194269_5.59038525413889 chr4 144990005 144990878 + 5.59038525413889 NA intron (NM_001276465, intron 67 of 69) intron (NM_001276465, intron 67 of 69) 97304 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak2_34_117_0.798802665161692_7.28204438194269_5.59038525413889 chr9 99090543 99091603 + 5.59038525413889 NA intron (NM_029094, intron 6 of 23) intron (NM_029094, intron 6 of 23) 49138 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak1_61_284_0.538476406868558_8.42405631248638_5.58943177556718 chr5 129942040 129942870 + 5.58943177556718 NA intron (NM_001001327, intron 1 of 1) CpG 346 NM_001286382 69568 Mm.288718 NM_027121 ENSMUSG00000066735 Vkorc1l1 2310024K08Rik vitamin K epoxide reductase complex, subunit 1-like 1 protein-coding common_peak1_194_1987_-0.236053005076107_10.8390755390242_5.58937152361812 chr11 49980330 49983352 + 5.58937152361812 NA Intergenic Intergenic -43490 NM_021540 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak1_95_906_-0.357958650063715_9.64597941549667_5.58883849379149 chr4 57956434 57957390 + 5.58883849379149 NA promoter-TSS (NM_011660) promoter-TSS (NM_011660) -501 NM_011660 22166 Mm.260618 NM_011660 ENSMUSG00000028367 Txn1 ADF|AW550880|Trx1|Txn thioredoxin 1 protein-coding unique_peak2_10_112_-1.18699353090759_6.22668219696139_5.58737569318399 chr11 61504769 61505289 + 5.58737569318399 NA promoter-TSS (NM_013717) promoter-TSS (NM_013717) -143 NM_013717 27078 Mm.261226 NM_013717 ENSMUSG00000001039 B9d1 AW045994|B9|Eppb9 B9 protein domain 1 protein-coding unique_peak2_10_112_-1.18699353090759_6.22668219696139_5.58737569318399-2 chr7 34321500 34322251 + 5.58737569318399 NA Intergenic Intergenic -36266 NM_172741 233103 Mm.491097 NM_172741 ENSMUSG00000066571 4931406P16Rik AA553327|mKIAA0355 RIKEN cDNA 4931406P16 gene protein-coding common_peak2_153_1028_0.296306585065453_10.1551805594267_5.58710972248401 chr3 81932087 81933487 + 5.58710972248401 NA intron (NM_177662, intron 1 of 7) intron (NM_177662, intron 1 of 7) 171 NM_177662 229445 Mm.254642 NM_177662 ENSMUSG00000028015 Ctso A330105D01Rik|AI118514 cathepsin O protein-coding common_peak2_152_1019_0.297451856421882_10.1430793650698_5.58629700393379 chr4 133276565 133278669 + 5.58629700393379 NA exon (NM_025667, exon 1 of 6) exon (NM_025667, exon 1 of 6) 173 NM_025667 52174 Mm.244748 NM_025667 ENSMUSG00000028857 Tmem222 5730406H10Rik|AA409341|D4Ertd196e transmembrane protein 222 protein-coding common_peak1_63_587_-0.450194459338483_8.97457511516712_5.58512779507386 chr8 25976037 25976952 + 5.58512779507386 NA intron (NM_029884, intron 1 of 17) CpG 250 NM_029884 52120 Mm.28326 NM_029884 ENSMUSG00000037260 Hgsnat 9430010M12Rik|AW208455|D8Ertd354e|Tmem76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding common_peak1_260_2769_-0.198737914117414_11.3363013038778_5.58511611413395 chr6 87040548 87042712 + 5.58511611413395 NA Intergenic Intergenic -1216 NM_013528 14583 Mm.19893 NM_013528 ENSMUSG00000029992 Gfpt1 2810423A18Rik|AI324119|AI449986|GFA|GFAT|GFAT1|GFAT1m|Gfpt glutamine fructose-6-phosphate transaminase 1 protein-coding common_peak1_181_1838_-0.245748410505534_10.7218315591592_5.58507887799187 chr12 100992257 100994226 + 5.58507887799187 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 28527 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak2_210_2172_-0.22487312004232_10.9730358991601_5.58386977949365 chr11 95335896 95340018 + 5.58386977949365 NA intron (NM_172543, intron 1 of 7) intron (NM_172543, intron 1 of 7) 939 NM_172543 215512 Mm.262113 NM_172543 ENSMUSG00000038893 Fam117a 5730593F17Rik|AW548096 family with sequence similarity 117, member A protein-coding common_peak1_31_291_-0.666958984568494_7.85634506659577_5.58015259289715 chr5 20881750 20882302 + 5.58015259289715 NA promoter-TSS (NM_177601) promoter-TSS (NM_177601) 98 NM_172992 68770 Mm.86410 NM_172992 ENSMUSG00000039987 Phtf2 1110054G21Rik|9530062N20Rik|AI447096|C77923 putative homeodomain transcription factor 2 protein-coding common_peak1_56_520_-0.480640842728334_8.78481914091434_5.57959629086365 chr6 128802009 128803313 + 5.57959629086365 NA Intergenic Intergenic -14020 NM_001159904 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding unique_peak2_5_71_-1.60937415572293_5.36523792358085_5.57954964143456 chr10 128891105 128891790 + 5.57954964143456 NA exon (NM_010272, exon 1 of 3) exon (NM_010272, exon 1 of 3) 271 NM_010272 14561 Mm.299218 NM_010272 ENSMUSG00000025352 Gdf11 BMP-11|Bmp11 growth differentiation factor 11 protein-coding unique_peak2_5_71_-1.60937415572293_5.36523792358085_5.57954964143456-2 chr6 134792824 134793231 + 5.57954964143456 NA promoter-TSS (NM_001048054) promoter-TSS (NM_001048054) -399 NM_001048054 70686 Mm.491182 NM_130447 ENSMUSG00000030203 Dusp16 3830417M17Rik|AW558566|D6Ertd213e|MKP-7|MKP7|Mkpm dual specificity phosphatase 16 protein-coding common_peak1_38_353_-0.594662100475136_8.17027449984543_5.576053653946 chr11 71003819 71004622 + 5.576053653946 NA exon (NM_178367, exon 1 of 12) exon (NM_178367, exon 1 of 12) 212 NM_178367 216877 Mm.35399 NM_178367 ENSMUSG00000040620 Dhx33 3110057P17Rik|9430096J02Rik|Ddx33 DEAH (Asp-Glu-Ala-His) box polypeptide 33 protein-coding common_peak2_38_353_-0.594662100475136_8.17027449984543_5.576053653946 chr14 52243820 52245221 + 5.576053653946 NA Intergenic Intergenic -6948 NM_201637 67772 Mm.289934 NM_201637 ENSMUSG00000053754 Chd8 5830451P18Rik|AU015341|Duplin|HELSNF1|mKIAA1564 chromodomain helicase DNA binding protein 8 protein-coding common_peak2_110_1061_-0.328649883439457_9.88824310908442_5.57580953847927 chr7 105971223 105973900 + 5.57580953847927 NA Intergenic Lx|LINE|L1 -18591 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak1_17_170_-0.913167153013231_6.96126893837928_5.57576978419786-2 chr17 24960231 24960736 + 5.57576978419786 NA TTS (NM_020608) TTS (NM_020608) 140 NM_198937 52009 Mm.371601 NM_198937 ENSMUSG00000024165 Hn1l 2810430B18Rik|AL022629|C16orf34|D17Ertd441e hematological and neurological expressed 1-like protein-coding common_peak1_17_170_-0.913167153013231_6.96126893837928_5.57576978419786 chr14 20682052 20682496 + 5.57576978419786 NA intron (NM_172596, intron 3 of 22) B1_Mur3|SINE|Alu 7953 NM_001168273 218811 Mm.173119 NM_172596 ENSMUSG00000039367 Sec24c 2610204K03Rik|mKIAA0079 Sec24 related gene family, member C (S. cerevisiae) protein-coding common_peak1_29_91_0.88509447654069_6.96610919432736_5.57576978419781-2 chr11 93987167 93987803 + 5.57576978419781 NA Intergenic Intergenic -8606 NM_001199203 70834 Mm.260737 NM_027569 ENSMUSG00000020859 Spag9 3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1 sperm associated antigen 9 protein-coding common_peak1_29_91_0.88509447654069_6.96610919432736_5.57576978419781-3 chr6 17736965 17737799 + 5.57576978419781 NA intron (NM_001289625, intron 1 of 15) intron (NM_001289625, intron 1 of 15) -6210 NM_001289629 64213 Mm.12051 NM_022332 ENSMUSG00000029534 St7 9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding common_peak1_29_91_0.88509447654069_6.96610919432736_5.57576978419781 chr11 75147264 75147969 + 5.57576978419781 NA intron (NM_001002764, intron 15 of 18) intron (NM_001002764, intron 15 of 18) 20536 NM_001098203 15248 Mm.57250 NM_010430 ENSMUSG00000043099 Hic1 AA408311|HIC-1 hypermethylated in cancer 1 protein-coding common_peak1_282_3037_-0.188764065059321_11.4745241219724_5.57480356419893 chr7 28377388 28380207 + 5.57480356419893 NA intron (NM_011756, intron 1 of 1) intron (NM_011756, intron 1 of 1) 431 NM_011756 22695 Mm.389856 NM_011756 ENSMUSG00000044786 Zfp36 Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36 zinc finger protein 36 protein-coding common_peak1_43_169_0.677019117742605_7.747900495009_5.57343510517587 chr14 75193746 75194686 + 5.57343510517587 NA intron (NM_008879, intron 2 of 16) intron (NM_008879, intron 2 of 16) -48071 NM_019775 56373 Mm.24242 NM_019775 ENSMUSG00000021999 Cpb2 1110032P04Rik|4930405E17Rik|AI255929|CPR|Cpu|TAFI carboxypeptidase B2 (plasma) protein-coding common_peak2_73_368_0.47891895633737_8.76693648422908_5.57323452045669 chr18 67288180 67290509 + 5.57323452045669 NA 5' UTR (NM_053261, exon 1 of 8) 5' UTR (NM_053261, exon 1 of 8) 121 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak1_87_824_-0.375227944066514_9.50063633709992_5.57240221061347 chr4 139579176 139580378 + 5.57240221061347 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 5057 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak2_48_445_-0.52402366300962_8.5388880684155_5.57105821707177 chr18 82525317 82527524 + 5.57105821707177 NA intron (NM_010777, intron 3 of 6) intron (NM_010777, intron 3 of 6) -28043 NM_001025256 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_72_675_-0.418560409896555_9.19159923133391_5.57053397514469 chr8 71908247 71909503 + 5.57053397514469 NA intron (NM_001166645, intron 1 of 2) CpG 269 NM_001166645 382019 Mm.251482 NM_001166645 ENSMUSG00000089857 Zfp882 ENSMUSG00000052439|Gm15468|OTTMUSG00000022410 zinc finger protein 882 protein-coding common_peak1_267_2853_-0.195001296953327_11.3812689709991_5.56919133076433 chr4 133630837 133633509 + 5.56919133076433 NA intron (NM_001017968, intron 1 of 7) intron (NM_001017968, intron 1 of 7) 1256 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak1_59_271_0.547805902533721_8.3613657925172_5.56816482048531 chr15 6555933 6557106 + 5.56816482048531 NA Intergenic Intergenic -23328 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_92_875_-0.363970338713584_9.59280189024438_5.56700668683903 chr9 20960759 20961674 + 5.56700668683903 NA Intergenic MT2B|LTR|ERVL -1328 NM_001199432 13433 Mm.128580 NM_010066 ENSMUSG00000004099 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI DNA methyltransferase (cytosine-5) 1 protein-coding common_peak2_378_3396_0.166985857008806_11.8135384313836_5.5662334640003 chr15 89428565 89431375 + 5.5662334640003 NA promoter-TSS (NR_004843) promoter-TSS (NR_004843) -43 NR_037153 12651 Mm.485045 NM_007692 ENSMUSG00000022617 Chkb Chetk|Chkl|Ck|Ck/Ek|Ck/Ek-beta|Ckb|Ckekb|Ek choline kinase beta protein-coding common_peak2_80_420_0.448665659926483_8.94200925302964_5.56562300298418 chr10 44379921 44381612 + 5.56562300298418 NA Intergenic Intergenic 21090 NR_035450 100316688 NR_035450 ENSMUSG00000089260 Mir1929 mir-1929|mmu-mir-1929 microRNA 1929 ncRNA common_peak1_219_1661_0.235810973988283_10.8166101537645_5.56550041133148 chr14 70055614 70057819 + 5.56550041133148 NA intron (NM_028560, intron 6 of 6) intron (NM_028560, intron 6 of 6) -20729 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding common_peak1_30_282_-0.677976038097576_7.80567022378309_5.56329203592811 chr12 32819572 32820119 + 5.56329203592811 NA promoter-TSS (NM_021524) promoter-TSS (NM_021524) -490 NM_021524 59027 Mm.202727 NM_021524 ENSMUSG00000020572 Nampt 1110035O14Rik|AI314458|AI480535|NAmPRTase|Pbef|Pbef1|Visfatin nicotinamide phosphoribosyltransferase protein-coding common_peak2_30_282_-0.677976038097576_7.80567022378309_5.56329203592811 chr6 124828043 124829041 + 5.56329203592811 NA intron (NM_013700, intron 1 of 19) intron (NM_013700, intron 1 of 19) 905 NM_013700 22225 Mm.3571 NM_013700 ENSMUSG00000038429 Usp5 AA407472|ISOT|ISOT-1|Ucht ubiquitin specific peptidase 5 (isopeptidase T) protein-coding unique_peak2_14_145_-1.00778043746867_6.68593434014568_5.56298255747263 chr7 128023967 128025187 + 5.56298255747263 NA Intergenic Lx8|LINE|L1 20199 NM_001079932 434246 Mm.389924 NM_001079932 ENSMUSG00000042828 Trim72 BC067209|MG53 tripartite motif-containing 72 protein-coding common_peak2_37_134_0.750160917532416_7.45189605581704_5.56267110614177 chr5 118154819 118155468 + 5.56267110614177 NA exon (NM_172721, exon 1 of 11) exon (NM_172721, exon 1 of 11) 315 NM_172721 231672 Mm.221769 NM_172721 ENSMUSG00000032867 Fbxw8 4930438M06Rik|FBW6|FBW8|FBXO29|Fbx29 F-box and WD-40 domain protein 8 protein-coding common_peak1_67_326_0.5036140578488_8.60495385442248_5.5626050503733 chr6 54680755 54681671 + 5.5626050503733 NA promoter-TSS (NM_001289741) promoter-TSS (NM_001289741) -411 NM_001289741 68235 Mm.233860 NM_026629 ENSMUSG00000038065 Mturn 2410066E13Rik|AI448550|B230212L03Rik maturin, neural progenitor differentiation regulator homolog (Xenopus) protein-coding common_peak2_67_326_0.5036140578488_8.60495385442248_5.5626050503733 chr19 46152436 46153270 + 5.5626050503733 NA intron (NM_178930, intron 1 of 39) CpG 295 NM_178930 107338 Mm.271620 NM_178930 ENSMUSG00000025224 Gbf1 1700083E03Rik|AI035702|AW049900|mKIAA0248 golgi-specific brefeldin A-resistance factor 1 protein-coding unique_peak2_34_317_-0.631437240760821_7.99716433490394_5.56001280453809 chr1 52374143 52376044 + 5.56001280453809 NA Intergenic Intergenic 125355 NM_008667 17936 Mm.25903 NM_008667 ENSMUSG00000002881 Nab1 - Ngfi-A binding protein 1 protein-coding unique_peak2_34_317_-0.631437240760821_7.99716433490394_5.56001280453809-2 chr8 94447173 94449372 + 5.56001280453809 NA Intergenic Intergenic -13169 NR_015514 320377 Mm.486022 NR_015514 9330175E14Rik A630085K21 RIKEN cDNA 9330175E14 gene ncRNA common_peak1_34_317_-0.631437240760821_7.99716433490394_5.56001280453809 chr10 19066520 19067279 + 5.56001280453809 NA Intergenic Intergenic -51489 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_34_317_-0.631437240760821_7.99716433490394_5.56001280453809-2 chr3 115815796 115816606 + 5.56001280453809 NA Intergenic Intergenic 71858 NR_027894 68161 Mm.392043 NR_015487 ENSMUSG00000054426 A930005H10Rik - RIKEN cDNA A930005H10 gene ncRNA common_peak1_88_834_-0.372614018597227_9.5193253780628_5.55996641291051 chr9 116383554 116384494 + 5.55996641291051 NA Intergenic Intergenic -208661 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_130_824_0.328836952713695_9.85266878549002_5.55947472771436 chr16 13255986 13257153 + 5.55947472771436 NA promoter-TSS (NM_001122667) promoter-TSS (NM_001122667) 88 NM_001122667 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding unique_peak2_18_178_-0.883451573867366_7.04208999033057_5.55940663474537 chr5 144307656 144308729 + 5.55940663474537 NA intron (NM_025833, intron 3 of 13) intron (NM_025833, intron 3 of 13) 31131 NR_040432 100504231 Mm.441035 NR_040432 ENSMUSG00000086894 Gm15708 OTTMUSG00000025583 predicted gene 15708 ncRNA common_peak1_18_178_-0.883451573867366_7.04208999033057_5.55940663474537 chr5 125405619 125406115 + 5.55940663474537 NA Intergenic Intergenic -15850 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak1_18_178_-0.883451573867366_7.04208999033057_5.55940663474537-2 chr6 128890501 128890909 + 5.55940663474537 NA intron (NM_001289706, intron 2 of 6) (CATA)n|Simple_repeat|Simple_repeat 419 NM_001254946 232406 Mm.30745 NM_001254946 ENSMUSG00000090164 BC035044 - cDNA sequence BC035044 protein-coding common_peak2_62_291_0.531784601071765_8.4557168594159_5.55729622042779 chr4 156202409 156203912 + 5.55729622042779 NA promoter-TSS (NR_030671) promoter-TSS (NR_030671) -124 NR_030671 100382 Mm.461024 NR_030671 AW011738 - expressed sequence AW011738 ncRNA common_peak1_73_684_-0.413564215450123_9.21317807012283_5.55711351339994 chr9 44867404 44868753 + 5.55711351339994 NA intron (NM_001081049, intron 1 of 35) intron (NM_001081049, intron 1 of 35) 13196 NM_001081049 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak2_106_1018_-0.333967916810041_9.82595437776079_5.55700772865363 chr5 138618789 138620406 + 5.55700772865363 NA intron (NM_001044747, intron 1 of 4) CpG 146 NM_013844 24135 Mm.27575 NM_013844 ENSMUSG00000058291 Zfp68 KRAB3|KRAZ2|Zfp70|mszf22|mszf49 zinc finger protein 68 protein-coding common_peak1_55_244_0.57653912220171_8.22490750010343_5.55637929487068 chr4 130926337 130927233 + 5.55637929487068 NA exon (NM_010686, exon 3 of 8) exon (NM_010686, exon 3 of 8) 13451 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding common_peak2_47_193_0.640474937091324_7.92015031073279_5.55596178877801 chr16 13796063 13797258 + 5.55596178877801 NA intron (NM_001039521, intron 10 of 17) intron (NM_001039521, intron 10 of 17) 15961 NM_001039521 106298 Mm.288606 NM_001039521 ENSMUSG00000022682 Rrn3 AL023001|E130302O19Rik|R75565|TIF-1A|Tif1a RRN3 RNA polymerase I transcription factor homolog (yeast) protein-coding common_peak1_278_2275_0.202666394734292_11.2536180396737_5.5559416230639 chr11 115475013 115477149 + 5.5559416230639 NA intron (NM_177778, intron 1 of 2) CpG 404 NM_177778 276905 Mm.38019 NM_177778 ENSMUSG00000057219 Armc7 A630084C13|BC023126 armadillo repeat containing 7 protein-coding common_peak2_412_4703_-0.150609830529069_12.1243674295718_5.55478810973621 chr19 5405366 5410024 + 5.55478810973621 NA intron (NR_027938, intron 1 of 3) intron (NR_027938, intron 1 of 3) 880 NR_027938 74931 Mm.388511 NR_015545 ENSMUSG00000086938 4930481A15Rik - RIKEN cDNA 4930481A15 gene ncRNA common_peak2_84_794_-0.383169202319227_9.4432264490121_5.55240284909996-2 chr6 3343851 3346340 + 5.55240284909996 NA Intergenic Intergenic 54476 NM_010156 209086 Mm.196013 NM_010156 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like protein-coding common_peak2_84_794_-0.383169202319227_9.4432264490121_5.55240284909996 chr2 114654135 114655370 + 5.55240284909996 NA intron (NM_025675, intron 1 of 8) CpG 176 NM_025675 66632 Mm.117809 NM_025675 ENSMUSG00000057147 Dph6 5730421E18Rik|Atpbd4 diphthamine biosynthesis 6 protein-coding common_peak1_43_399_-0.557446135894418_8.36513312182752_5.55227332911604 chr5 45520286 45520974 + 5.55227332911604 NA intron (NM_025895, intron 1 of 3) CpG 401 NM_025895 66999 Mm.283045 NM_025895 ENSMUSG00000015804 Med28 1500003D12Rik|AI451633|AU045690|Eg1|FKSG20|magicin mediator complex subunit 28 protein-coding common_peak1_162_1111_0.284903371197863_10.2613927583224_5.55214760401904 chr1 34433999 34435566 + 5.55214760401904 NA Intergenic Intergenic -1583 NR_039562 100628580 NR_039562 ENSMUSG00000092852 Mir5103 mir-5103|mmu-mir-5103|mu-mir-5103 microRNA 5103 ncRNA common_peak2_77_398_0.459310824571872_8.86990034850828_5.55168556178219 chr9 22388364 22389873 + 5.55168556178219 NA promoter-TSS (NM_028390) promoter-TSS (NM_028390) 88 NM_028390 68743 Mm.282751 NM_028390 ENSMUSG00000036777 Anln 1110037A17Rik|2900037I21Rik|C78101|Scraps anillin, actin binding protein protein-coding common_peak1_19_186_-0.85576023225686_7.11901434375921_5.55086395507739 chr4 115839212 115839616 + 5.55086395507739 NA intron (NM_021461, intron 1 of 12) CpG 216 NM_001285487 17346 Mm.209327 NM_021461 ENSMUSG00000028708 Mknk1 2410048M24Rik|Mnk1 MAP kinase-interacting serine/threonine kinase 1 protein-coding common_peak1_130_1272_-0.296929442054484_10.1655519828741_5.55033543307972 chr18 12971796 12973276 + 5.55033543307972 NA intron (NM_008378, intron 1 of 10) intron (NM_008378, intron 1 of 10) 284 NM_008378 16210 Mm.8154 NM_008378 ENSMUSG00000024423 Impact E430016J11Rik impact, RWD domain protein protein-coding common_peak1_181_1837_-0.244963697382632_10.7214392025977_5.54982902833007 chr11 83549447 83551911 + 5.54982902833007 NA Intergenic Intergenic -20161 NM_013653 20304 Mm.284248 NM_013653 ENSMUSG00000035042 Ccl5 MuRantes|RANTES|SISd|Scya5|TCP228 chemokine (C-C motif) ligand 5 protein-coding common_peak2_117_714_0.350339284562429_9.65696907394697_5.54961862341294 chr2 150829652 150832238 + 5.54961862341294 NA 3' UTR (NM_153781, exon 20 of 20) 3' UTR (NM_153781, exon 20 of 20) 44149 NM_153781 110078 Mm.222584 NM_153781 ENSMUSG00000033059 Pygb - brain glycogen phosphorylase protein-coding common_peak1_29_273_-0.689375650362824_7.75334425777912_5.54918663442096 chr7 58448007 58448653 + 5.54918663442096 NA Intergenic Intergenic -209872 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_116_1123_-0.317348354459781_9.97575214299104_5.54885356953316 chr13 55445243 55446127 + 5.54885356953316 NA intron (NM_011938, intron 1 of 15) CpG 354 NM_001112711 26385 Mm.10193 NM_011938 ENSMUSG00000074886 Grk6 Gprk6 G protein-coupled receptor kinase 6 protein-coding common_peak1_67_626_-0.435560749455156_9.07454125807446_5.54871808131723 chr7 122313258 122314317 + 5.54871808131723 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 24662 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak1_178_1261_0.268048390440219_10.4355203902027_5.54647575067945 chr1 36938751 36940308 + 5.54647575067945 NA promoter-TSS (NM_018872) promoter-TSS (NM_018872) -2 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding common_peak1_199_1463_0.25015228741141_10.6407759819897_5.54545199097455 chr11 118156135 118158982 + 5.54545199097455 NA Intergenic Intergenic -28339 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak2_179_1814_-0.246350572945769_10.7025785464102_5.54485275164098 chr9 62810539 62812931 + 5.54485275164098 NA promoter-TSS (NM_010193) promoter-TSS (NM_010193) -87 NM_010193 14155 Mm.24069 NM_010193 ENSMUSG00000032244 Fem1b mKIAA0396 feminization 1 homolog b (C. elegans) protein-coding unique_peak2_27_81_0.929012745399842_6.822058377318_5.54450483609955 chr11 109246402 109247120 + 5.54450483609955 NA intron (NM_001165934, intron 12 of 16) intron (NM_001165934, intron 12 of 16) 51420 NM_001165934 19739 Mm.38548 NM_011268 ENSMUSG00000020599 Rgs9 RGS9-1|Rgs9-2 regulator of G-protein signaling 9 protein-coding common_peak1_45_417_-0.542286016801018_8.43621612368037_5.54383419377264 chr9 123938283 123939373 + 5.54383419377264 NA Intergenic Lx9|LINE|L1 29864 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding common_peak2_134_1315_-0.291630620017326_10.2161284637266_5.54320040292338 chr9 77916401 77918737 + 5.54320040292338 NA intron (NM_134255, intron 1 of 7) CpG 204 NM_134255 68801 Mm.430736 NM_134255 ENSMUSG00000032349 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) protein-coding common_peak2_65_312_0.513913411914618_8.54697555288993_5.54298497368594 chr1 13292897 13294287 + 5.54298497368594 NA intron (NM_008678, intron 1 of 22) intron (NM_008678, intron 1 of 22) 78837 NM_001302702 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding common_peak1_246_1938_0.218272030364931_11.0302331032893_5.54182316749679 chr1 160790983 160793475 + 5.54182316749679 NA intron (NM_013862, intron 1 of 20) CpG 709 NM_013862 29809 Mm.25833 NM_013862 ENSMUSG00000026721 Rabgap1l 5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471 RAB GTPase activating protein 1-like protein-coding common_peak1_47_435_-0.527796545498475_8.50428605202769_5.54152179622386-2 chr6 125351340 125352086 + 5.54152179622386 NA intron (NM_011609, intron 1 of 9) intron (NM_011609, intron 1 of 9) 1990 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding common_peak1_47_435_-0.527796545498475_8.50428605202769_5.54152179622386 chr2 156196002 156196679 + 5.54152179622386 NA promoter-TSS (NM_172674) promoter-TSS (NM_172674) -307 NM_172674 228829 Mm.427078 NM_172674 ENSMUSG00000038116 Phf20 6820402O20Rik PHD finger protein 20 protein-coding common_peak2_228_1753_0.229034862313441_10.8909504636015_5.54050235122355 chrX 20686893 20689424 + 5.54050235122355 NA promoter-TSS (NM_011049) promoter-TSS (NM_011049) 204 NM_001310456 18555 Mm.102574 NM_011049 ENSMUSG00000031065 Cdk16 Crk5|Pctaire1|Pctk1 cyclin-dependent kinase 16 protein-coding common_peak2_49_206_0.619140545823416_8.00305723041103_5.53962489521271 chr7 142094609 142095995 + 5.53962489521271 NA promoter-TSS (NM_008748) promoter-TSS (NM_008748) -18 NM_008748 18218 Mm.39725 NM_008748 ENSMUSG00000037887 Dusp8 5530400B01Rik|AI593498|Nttp1 dual specificity phosphatase 8 protein-coding common_peak1_53_491_-0.493694627313289_8.6956671916826_5.53871270255891 chr8 106210345 106210992 + 5.53871270255891 NA promoter-TSS (NM_145404) promoter-TSS (NM_145404) 265 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding common_peak1_95_905_-0.356367149581427_9.64518366525552_5.53868902833632 chr16 78605581 78606998 + 5.53868902833632 NA Intergenic Intergenic -29601 NM_025967 67102 Mm.37332 NM_025967 ENSMUSG00000022864 D16Ertd472e 1700010I10Rik|2310009O17Rik|E330003K22Rik|Eurl DNA segment, Chr 16, ERATO Doi 472, expressed protein-coding common_peak1_28_264_-0.701185234937994_7.69925593198156_5.53815171997927 chr19 5295588 5296122 + 5.53815171997927 NA promoter-TSS (NM_030109) promoter-TSS (NM_030109) -400 NM_030109 319322 Mm.196532 NM_030109 ENSMUSG00000024853 Sf3b2 145kDa|2610311M13Rik|2810441F20Rik|B230398H18Rik|SAP145|SF3b1|SF3b145|SF3b150 splicing factor 3b, subunit 2 protein-coding common_peak2_42_163_0.688175165635867_7.70163958743602_5.53815171997922 chr5 122899600 122900811 + 5.53815171997922 NA 5' UTR (NM_013910, exon 1 of 12) 5' UTR (NM_013910, exon 1 of 12) 145 NM_013910 30841 Mm.86406 NM_013910 ENSMUSG00000029475 Kdm2b Cxxc2|Fbl10|Fbxl10|Jhdm1b|PCCX2 lysine (K)-specific demethylase 2B protein-coding common_peak1_318_3485_-0.175312126485263_11.6797007908831_5.53810359056617 chr14 54463128 54465104 + 5.53810359056617 NA promoter-TSS (NM_022993) promoter-TSS (NM_022993) -31 NM_022993 65107 Mm.472719 NM_022993 ENSMUSG00000022175 Lrp10 Lrp9 low-density lipoprotein receptor-related protein 10 protein-coding common_peak2_146_966_0.303638673587127_10.0691914162704_5.53678845247948 chr6 88044202 88045834 + 5.53678845247948 NA promoter-TSS (NM_001293653) promoter-TSS (NM_001293653) -1 NM_001293653 19349 Mm.333233 NM_009005 ENSMUSG00000079477 Rab7 Rab7a RAB7, member RAS oncogene family protein-coding common_peak1_280_3011_-0.188914567470867_11.4620487709365_5.5350682088378 chr2 9870760 9873937 + 5.5350682088378 NA intron (NM_008091, intron 3 of 5) intron (NM_008091, intron 3 of 5) 6252 NM_008091 14462 Mm.313866 NM_008091 ENSMUSG00000015619 Gata3 Gata-3|jal GATA binding protein 3 protein-coding unique_peak2_11_119_-1.11972743870278_6.34702687625713_5.5347163679189 chr10 57798909 57799608 + 5.5347163679189 NA intron (NM_020561, intron 1 of 7) intron (NM_020561, intron 1 of 7) 4714 NM_020561 57319 Mm.2379 NM_020561 ENSMUSG00000019872 Smpdl3a 0610010C24Rik|AI529588|ASM3A|ASML3|ASML3A sphingomyelin phosphodiesterase, acid-like 3A protein-coding common_peak1_317_2702_0.186142796248058_11.4934171946587_5.53428334401125 chr8 126831643 126834157 + 5.53428334401125 NA Intergenic Intergenic 113021 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak1_60_278_0.540398139217785_8.39432038143808_5.53319635083363 chr11 114889596 114890780 + 5.53319635083363 NA 5' UTR (NM_170758, exon 1 of 7) 5' UTR (NM_170758, exon 1 of 7) 147 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding common_peak1_68_635_-0.43028763503756_9.09773913776558_5.53175779863866 chr13 33074645 33075725 + 5.53175779863866 NA Intergenic Intergenic -8918 NM_173052 282663 Mm.314490 NM_173052 ENSMUSG00000051029 Serpinb1b 6330533H24Rik|EIB|Serpin1b1|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1b protein-coding common_peak2_68_635_-0.43028763503756_9.09773913776558_5.53175779863866 chr9 113916099 113918060 + 5.53175779863866 NA intron (NM_001286600, intron 34 of 34) intron (NM_001286600, intron 34 of 34) -13855 NM_001083319 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding common_peak1_102_977_-0.342142771175494_9.76261926936449_5.53066024619074 chr14 31640453 31641812 + 5.53066024619074 NA promoter-TSS (NM_019975) promoter-TSS (NM_019975) 75 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding common_peak1_27_255_-0.713435249982075_7.64328237500896_5.53055277645037-2 chr13 46737302 46737770 + 5.53055277645037 NA Intergenic B1_Mur4|SINE|Alu -9687 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak1_27_255_-0.713435249982075_7.64328237500896_5.53055277645037 chr11 106083547 106084104 + 5.53055277645037 NA Intergenic Intergenic -1077 NM_011947 26406 Mm.27041 NM_011947 ENSMUSG00000020700 Map3k3 AW548911|MAPKKK3|Mekk3|mKIAA4031 mitogen-activated protein kinase kinase kinase 3 protein-coding common_peak1_27_255_-0.713435249982075_7.64328237500896_5.53055277645037-3 chr18 82504024 82504633 + 5.53055277645037 NA intron (NM_010777, intron 2 of 6) intron (NM_010777, intron 2 of 6) 29205 NM_001025245 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_185_1328_0.261303642797772_10.5067772106751_5.52874390411018 chr6 146500739 146502367 + 5.52874390411018 NA intron (NM_019923, intron 1 of 56) intron (NM_019923, intron 1 of 56) 670 NM_010586 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak2_244_2573_-0.204814514431696_11.2273890810049_5.5284960498646 chr15 66557849 66561998 + 5.5284960498646 NA intron (NM_172514, intron 1 of 9) intron (NM_172514, intron 1 of 9) 1123 NM_172514 213068 Mm.132299 NM_172514 ENSMUSG00000036944 Tmem71 AI661017|E430024D12 transmembrane protein 71 protein-coding common_peak1_60_558_-0.462185021796218_8.89561196194508_5.5271377729228 chr11 63991765 63992970 + 5.5271377729228 NA intron (NM_178379, intron 5 of 6) intron (NM_178379, intron 5 of 6) 28141 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak1_63_298_0.525476211299775_8.48673977984799_5.52710529309754-2 chr17 7876960 7878043 + 5.52710529309754 NA Intergenic Intergenic -48499 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding common_peak1_63_298_0.525476211299775_8.48673977984799_5.52710529309754 chr1 127233196 127234181 + 5.52710529309754 NA intron (NM_145128, intron 1 of 17) ORR1D1|LTR|ERVL-MaLR 28702 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding unique_peak2_26_246_-0.726159664745083_7.58528739921214_5.52681585134476 chr13 107902732 107904260 + 5.52681585134476 NA Intergenic Intergenic -13432 NM_145456 67263 Mm.490418 NM_145456 ENSMUSG00000032846 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak1_21_53_1.10491024053048_6.30734262242871_5.52599402233033 chr13 13538288 13538720 + 5.52599402233033 NA Intergenic Intergenic -51905 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding common_peak2_103_987_-0.339721364571034_9.77850654929916_5.5249125956543 chr10 41935877 41938554 + 5.5249125956543 NA intron (NM_001034858, intron 12 of 17) intron (NM_001034858, intron 12 of 17) 49776 NM_001013370 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding common_peak1_15_29_1.38936266751665_5.60157192936684_5.52458608579797-2 chr11 76946182 76946610 + 5.52458608579797 NA exon (NM_178645, exon 2 of 12) exon (NM_178645, exon 2 of 12) 740 NM_178645 104184 Mm.399785 NM_178645 ENSMUSG00000020840 Blmh AI035728|Bh|Bmh bleomycin hydrolase protein-coding common_peak1_15_29_1.38936266751665_5.60157192936684_5.52458608579797-3 chr12 17376276 17376664 + 5.52458608579797 NA intron (NM_001008421, intron 12 of 20) B1_Mur3|SINE|Alu 21078 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA unique_peak1_15_29_1.38936266751665_5.60157192936684_5.52458608579797 chr13 54222926 54223292 + 5.52458608579797 NA TTS (NM_001010973) TTS (NM_001010973) 30980 NM_008286 15466 Mm.57243 NM_008286 ENSMUSG00000034987 Hrh2 - histamine receptor H2 protein-coding unique_peak2_6_79_-1.48858796724215_5.57763411126629_5.52458608579797-3 chr18 70544118 70544837 + 5.52458608579797 NA Intergenic Intergenic -14156 NM_001289515 26447 Mm.244352 NM_011972 ENSMUSG00000038425 Poli Rad30b polymerase (DNA directed), iota protein-coding unique_peak2_6_79_-1.48858796724215_5.57763411126629_5.52458608579797 chr11 104613749 104614665 + 5.52458608579797 NA intron (NM_016780, intron 1 of 14) intron (NM_016780, intron 1 of 14) 6207 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_15_29_1.38936266751665_5.60157192936684_5.52458608579797 chr1 90998961 90999358 + 5.52458608579797 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) 432 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_6_79_-1.48858796724215_5.57763411126629_5.52458608579797-2 chr13 75824946 75825574 + 5.52458608579797 NA Intergenic Intergenic -14626 NM_053108 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak1_75_703_-0.405842792867693_9.25651022220345_5.52392176183982 chr19 44280413 44281629 + 5.52392176183982 NA Intergenic Intergenic -12655 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_282_2319_0.200232999427829_11.2800255897288_5.52111837059448 chr2 35677223 35682886 + 5.52111837059448 NA intron (NM_001290641, intron 3 of 15) intron (NM_001290641, intron 3 of 15) -11940 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding unique_peak2_21_203_-0.812627599277544_7.26611154233272_5.51919316393795 chr14 77523896 77525135 + 5.51919316393795 NA intron (NM_172813, intron 7 of 18) intron (NM_172813, intron 7 of 18) -17647 NR_033141 629678 Mm.390721 NM_001037935 ENSMUSG00000067973 Gm6994 EG629678 predicted gene 6994 ncRNA common_peak2_341_2972_0.177541798982169_11.6264746473987_5.51874332691656 chr2 128966375 128968618 + 5.51874332691656 NA promoter-TSS (NM_178404) promoter-TSS (NM_178404) 94 NM_178404 78751 Mm.26377 NM_178404 ENSMUSG00000042851 Zc3h6 4631426G04Rik|4833425H18Rik|AU024389|AW060453|Zc3hdc6|mKIAA2035 zinc finger CCCH type containing 6 protein-coding common_peak1_44_407_-0.546246704406864_8.39930198976806_5.51776091432159-2 chr9 116338638 116339433 + 5.51776091432159 NA Intergenic MTE2a|LTR|ERVL-MaLR -163672 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_44_407_-0.546246704406864_8.39930198976806_5.51776091432159 chr18 56707153 56707676 + 5.51776091432159 NA promoter-TSS (NM_010721) promoter-TSS (NM_010721) -399 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak1_217_2252_-0.219277051519436_11.0279930724757_5.51760596676568 chr1 161764709 161766803 + 5.51760596676568 NA Intergenic Intergenic 22739 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_224_2335_-0.215540334437065_11.0820543916615_5.51741996828207 chr6 39380057 39381986 + 5.51741996828207 NA promoter-TSS (NM_011226) promoter-TSS (NM_011226) -407 NM_011226 19331 Mm.123866 NM_011226 ENSMUSG00000029923 Rab19 - RAB19, member RAS oncogene family protein-coding common_peak1_15_153_-0.970533277569733_6.78151990191003_5.5171056220564 chr12 112822675 112823100 + 5.5171056220564 NA intron (NM_028023, intron 1 of 1) intron (NM_028023, intron 1 of 1) 6502 NM_028023 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding unique_peak2_7_87_-1.38979066669849_5.76453628528805_5.51708781997169 chr2 156009838 156010532 + 5.51708781997169 NA intron (NM_025516, intron 4 of 12) PB1D9|SINE|Alu 2060 NM_025516 66366 Mm.141276 NM_025516 ENSMUSG00000005881 Ergic3 2310015B14Rik|AV318804|CGI-54|D2Ucla1|NY-BR-84|Sdbcag84 ERGIC and golgi 3 protein-coding common_peak1_69_340_0.494430096685717_8.66084297736703_5.51689322012991 chr3 18624127 18624946 + 5.51689322012991 NA Intergenic Intergenic -144059 NR_040544 73959 Mm.60616 NR_040544 ENSMUSG00000102699 4930433B08Rik - RIKEN cDNA 4930433B08 gene ncRNA common_peak1_513_5038_0.137292219373279_12.3675678506564_5.51650772894621 chr18 80703594 80709078 + 5.51650772894621 NA intron (NM_198429, intron 1 of 9) intron (NM_198429, intron 1 of 9) 1837 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_365_3247_0.169930361201436_11.7503010977859_5.51637629498651 chr11 74836934 74839743 + 5.51637629498651 NA intron (NM_010813, intron 4 of 5) CpG 7414 NM_010813 17428 Mm.3759 NM_010813 ENSMUSG00000000282 Mnt Rox|bHLHd3 max binding protein protein-coding common_peak1_66_615_-0.436242840545178_9.04866512042231_5.51586491381696 chr13 73937764 73938350 + 5.51586491381696 NA promoter-TSS (NM_027182) promoter-TSS (NM_027182) 246 NM_001308041 105246 Mm.278509 NM_001024508 ENSMUSG00000057649 Brd9 AL022779 bromodomain containing 9 protein-coding common_peak1_20_49_1.13361845402377_6.21066541678661_5.51545982808713 chr11 11517982 11518270 + 5.51545982808713 NA Intergenic Intergenic 28860 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak1_20_49_1.13361845402377_6.21066541678661_5.51545982808713-2 chr2 93759438 93759790 + 5.51545982808713 NA intron (NM_010163, intron 8 of 13) intron (NM_010163, intron 8 of 13) 62954 NM_010163 14043 Mm.4336 NM_010163 ENSMUSG00000027198 Ext2 AI893565 exostoses (multiple) 2 protein-coding unique_peak1_20_49_1.13361845402377_6.21066541678661_5.51545982808713 chr2 30469846 30470445 + 5.51545982808713 NA Intergenic Intergenic 4054 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak1_23_62_1.03649554459218_6.49552769579601_5.51474340066327 chr1 194982594 194983206 + 5.51474340066327 NA Intergenic B1F2|SINE|Alu -5941 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA common_peak1_20_195_-0.837235200316711_7.19609224395685_5.51367225550437 chr11 52268777 52269228 + 5.51367225550437 NA intron (NM_001313981, intron 3 of 10) MIR|SINE|MIR 13593 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak1_20_195_-0.837235200316711_7.19609224395685_5.51367225550437-2 chr3 123386125 123386606 + 5.51367225550437 NA promoter-TSS (NM_201638) promoter-TSS (NM_201638) -375 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding common_peak1_36_129_0.757415838182956_7.40107573211993_5.51348688312815-3 chr15 100443732 100444234 + 5.51348688312815 NA Intergenic MIR3|SINE|MIR 20790 NR_040351 432982 Mm.234608 NM_001034883 ENSMUSG00000087444 Gm5475 EG432982 predicted gene 5475 ncRNA common_peak1_36_129_0.757415838182956_7.40107573211993_5.51348688312815 chr10 82240748 82241449 + 5.51348688312815 NA intron (NM_001105557, intron 1 of 3) intron (NM_001105557, intron 1 of 3) 177 NM_001105557 237411 NM_172789 ENSMUSG00000062931 Zfp938 B230315N10Rik zinc finger protein 938 protein-coding common_peak1_36_129_0.757415838182956_7.40107573211993_5.51348688312815-2 chr11 78037828 78038481 + 5.51348688312815 NA TTS (NM_183286) TTS (NM_183286) 213 NM_008028 14252 Mm.130227 NM_008028 ENSMUSG00000061981 Flot2 AI573412|Esa|reggie-2 flotillin 2 protein-coding common_peak1_23_220_-0.774127091299337_7.40083901374176_5.5134868831281 chr11 83625686 83626096 + 5.5134868831281 NA Intergenic Intergenic 23487 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding unique_peak2_23_220_-0.774127091299337_7.40083901374176_5.5134868831281-3 chr6 50545045 50546510 + 5.5134868831281 NA Intergenic Intergenic 20697 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding unique_peak2_23_220_-0.774127091299337_7.40083901374176_5.5134868831281 chr2 166487275 166488626 + 5.5134868831281 NA Intergenic B4|SINE|B4 40499 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak1_23_220_-0.774127091299337_7.40083901374176_5.5134868831281-2 chr5 122162720 122163195 + 5.5134868831281 NA intron (NM_013636, intron 1 of 6) intron (NM_013636, intron 1 of 6) 4678 NM_013636 19047 Mm.280784 NM_013636 ENSMUSG00000004455 Ppp1cc PP-1G|PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform protein-coding unique_peak2_23_220_-0.774127091299337_7.40083901374176_5.5134868831281-2 chr3 152477918 152479078 + 5.5134868831281 NA intron (NM_001081277, intron 11 of 13) intron (NM_001081277, intron 11 of 13) 81814 NM_001287139 108946 Mm.379292 NM_198416 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 protein-coding common_peak1_23_220_-0.774127091299337_7.40083901374176_5.5134868831281-3 chr6 120039888 120040329 + 5.5134868831281 NA Intergenic Intergenic -1453 NM_001185021 232341 Mm.333349 NM_198703 ENSMUSG00000045962 Wnk1 6430573H23Rik|EG406236|Hsn2|Prkwnk1|mKIAA0344 WNK lysine deficient protein kinase 1 protein-coding common_peak1_83_443_0.436283399821106_9.01255756626066_5.51343325176872 chr6 30336346 30337571 + 5.51343325176872 NA Intergenic L2a|LINE|L2 -32419 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding unique_peak2_36_335_-0.61253377156735_8.08605053699509_5.51307209431699 chr17 46387661 46389282 + 5.51307209431699 NA intron (NM_207671, intron 2 of 9) intron (NM_207671, intron 2 of 9) 4705 NM_021346 57908 Mm.439916 NM_021346 ENSMUSG00000015597 Zfp318 2610034E08Rik|D530032D06Rik|TZF|Znf318 zinc finger protein 318 protein-coding common_peak1_58_265_0.550243969540636_8.33040442027151_5.5129789945427 chr5 113156061 113157183 + 5.5129789945427 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 6691 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak1_32_107_0.822432445497411_7.16610372491217_5.51295936543964-3 chr9 14285326 14285827 + 5.51295936543964 NA intron (NM_030261, intron 1 of 9) intron (NM_030261, intron 1 of 9) 9275 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak1_32_107_0.822432445497411_7.16610372491217_5.51295936543964-2 chr4 116720925 116721539 + 5.51295936543964 NA 5' UTR (NM_146151, exon 1 of 11) 5' UTR (NM_146151, exon 1 of 11) 277 NM_146151 230661 Mm.482431 NM_146151 ENSMUSG00000033985 Tesk2 - testis-specific kinase 2 protein-coding unique_peak2_32_107_0.822432445497411_7.16610372491217_5.51295936543964 chr18 64925305 64926173 + 5.51295936543964 NA intron (NM_001114386, intron 1 of 30) intron (NM_001114386, intron 1 of 30) 37983 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding common_peak2_32_107_0.822432445497411_7.16610372491217_5.51295936543964 chr17 28247053 28247769 + 5.51295936543964 NA intron (NM_011145, intron 2 of 7) (TCC)n|Simple_repeat|Simple_repeat 14657 NM_011145 19015 Mm.328914 NM_011145 ENSMUSG00000002250 Ppard NUC-1|NUC1|Nr1c2|PPAR-beta|PPAR-delta|PPAR[b]|PPARdelta|Pparb|Pparb/d peroxisome proliferator activator receptor delta protein-coding common_peak1_32_107_0.822432445497411_7.16610372491217_5.51295936543964 chr13 62785479 62786162 + 5.51295936543964 NA promoter-TSS (NM_001256065) promoter-TSS (NM_001256065) -12 NM_001256065 380850 Mm.439823 NM_001256065 ENSMUSG00000091183 Gm5141 - predicted gene 5141 protein-coding common_peak1_58_539_-0.471289192009007_8.84117100104633_5.51283884339643 chrX 103481836 103482848 + 5.51283884339643 NA non-coding (NR_002844, exon 4 of 4) non-coding (NR_002844, exon 4 of 4) 891 NR_001570 213742 Mm.274770 NR_001463 ENSMUSG00000086503 Xist A430022B11|AI314753 inactive X specific transcripts ncRNA common_peak2_39_146_0.718074193980768_7.55870944182675_5.51279429452839-2 chr5 113944859 113946294 + 5.51279429452839 NA intron (NM_198109, intron 14 of 14) intron (NM_198109, intron 14 of 14) -36870 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_39_146_0.718074193980768_7.55870944182675_5.51279429452839 chr6 146633911 146634568 + 5.51279429452839 NA intron (NM_026281, intron 1 of 11) intron (NM_026281, intron 1 of 11) 353 NM_026281 67623 Mm.278037 NM_026281 ENSMUSG00000040234 Tm7sf3 2010003B14Rik|NARP1 transmembrane 7 superfamily member 3 protein-coding common_peak2_39_146_0.718074193980768_7.55870944182675_5.51279429452839 chr19 16204884 16205745 + 5.51279429452839 NA intron (NM_008139, intron 1 of 6) intron (NM_008139, intron 1 of 6) 41216 NR_033228 595139 Mm.405662 NR_033228 E030024N20Rik 9030417F11Rik|Ppia-ps8 peptidylprolyl isomerase A pseudogene 8 pseudo common_peak1_32_299_-0.651498742835002_7.90306931907838_5.51270711036374 chr4 134159787 134160432 + 5.51270711036374 NA intron (NM_144527, intron 3 of 13) RLTR4_MM-int|LTR|ERV1 26976 NM_144527 70012 Mm.26542 NM_144527 ENSMUSG00000037443 Cep85 2410030J07Rik|AI173272|AI173504|Ccdc21 centrosomal protein 85 protein-coding common_peak2_39_362_-0.586079199178618_8.21078613840644_5.51265754981536 chr19 46075912 46077054 + 5.51265754981536 NA intron (NM_053086, intron 1 of 12) intron (NM_053086, intron 1 of 12) 636 NM_001039351 70769 Mm.402190 NM_053086 ENSMUSG00000015176 Nolc1 NOPP130|NOPP140|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding common_peak2_72_362_0.478493288389878_8.74307238219069_5.51260883274882 chr7 132779924 132782256 + 5.51260883274882 NA intron (NM_212473, intron 1 of 4) intron (NM_212473, intron 1 of 4) 5845 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_241_1887_0.220536106459964_10.9929111025918_5.51134136715067 chr5 113589901 113593133 + 5.51134136715067 NA Intergenic Intergenic 41097 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak1_128_808_0.329865793977255_9.82492878941861_5.50982516442543 chr5 36573665 36575171 + 5.50982516442543 NA intron (NM_001113362, intron 2 of 14) intron (NM_001113362, intron 2 of 14) 7979 NM_133910 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding common_peak1_208_1553_0.241974828117032_10.7227582024662_5.5085228592554 chr1 86487004 86488528 + 5.5085228592554 NA Intergenic CpG -38970 NM_008972 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak1_162_1112_0.28360656657941_10.2620411606317_5.50700593524772 chr11 50102195 50103851 + 5.50700593524772 NA intron (NM_021540, intron 8 of 8) intron (NM_021540, intron 8 of 8) -28337 NM_001290759 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding common_peak2_54_500_-0.487375774809292_8.72497890579056_5.50672721157714 chr11 59201692 59203157 + 5.50672721157714 NA promoter-TSS (NM_001302335) promoter-TSS (NM_001302335) 7 NR_037964 72203 Mm.339566 NR_037964 2610507I01Rik 5033414D05Rik RIKEN cDNA 2610507I01 gene ncRNA common_peak2_52_481_-0.497147570786849_8.66431555083654_5.50407738579016 chr15 80638535 80640777 + 5.50407738579016 NA intron (NM_001289442, intron 4 of 7) intron (NM_001289442, intron 4 of 7) -6417 NR_105922 102466773 NR_105922 ENSMUSG00000098631 Mir6957 Gm27895|mmu-mir-6957 microRNA 6957 ncRNA unique_peak2_24_229_-0.759474858807991_7.46575262154038_5.50369988058775 chr2 32176791 32178108 + 5.50369988058775 NA intron (NM_001159634, intron 1 of 31) intron (NM_001159634, intron 1 of 31) 26301 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding unique_peak2_35_325_-0.617430481172054_8.04001291364505_5.50324108158992 chr11 101008316 101010070 + 5.50324108158992 NA promoter-TSS (NM_016920) promoter-TSS (NM_016920) -259 NM_016920 11975 Mm.340818 NM_016920 ENSMUSG00000019302 Atp6v0a1 AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1 ATPase, H+ transporting, lysosomal V0 subunit A1 protein-coding common_peak1_76_391_0.462011696657859_8.84571569244414_5.5015454113875 chr2 118553900 118554814 + 5.5015454113875 NA Intergenic Intergenic -4679 NM_138313 171543 Mm.210125 NM_138313 ENSMUSG00000040093 Bmf AW260063|AW411872 BCL2 modifying factor protein-coding common_peak2_214_1613_0.23740789385449_10.775128810205_5.50092919031663 chr5 21210245 21214793 + 5.50092919031663 NA intron (NM_175437, intron 5 of 30) intron (NM_175437, intron 5 of 30) 26252 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak2_61_285_0.533423179142273_8.42658292634952_5.50037744503329-2 chr7 106209594 106211883 + 5.50037744503329 NA intron (NM_029000, intron 1 of 3).2 Lx3_Mus|LINE|L1 4599 NM_001243039 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak2_61_285_0.533423179142273_8.42658292634952_5.50037744503329 chr15 5554282 5555947 + 5.50037744503329 NA intron (NR_045274, intron 2 of 4) intron (NR_045274, intron 2 of 4) 58796 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_25_238_-0.745445563339817_7.52814402631084_5.49941174818357-2 chr19 60861441 60862041 + 5.49941174818357 NA promoter-TSS (NM_053198) promoter-TSS (NM_053198) -311 NM_053198 94281 Mm.48179 NM_053198 ENSMUSG00000063698 Sfxn4 - sideroflexin 4 protein-coding common_peak1_25_238_-0.745445563339817_7.52814402631084_5.49941174818357-4 chr9 108991258 108991737 + 5.49941174818357 NA promoter-TSS (NM_173019) promoter-TSS (NM_173019) -405 NM_173019 270198 Mm.132391 NM_173019 ENSMUSG00000025648 Pfkfb4 C230090D14 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 protein-coding common_peak1_25_238_-0.745445563339817_7.52814402631084_5.49941174818357 chr15 62169930 62170488 + 5.49941174818357 NA intron (NR_003368, intron 4 of 8) intron (NR_003368, intron 4 of 8) 49242 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_25_238_-0.745445563339817_7.52814402631084_5.49941174818357-3 chr6 129592705 129593317 + 5.49941174818357 NA intron (NM_010654, intron 1 of 5) intron (NM_010654, intron 1 of 5) 1200 NM_010654 16643 Mm.391515 NM_010654 ENSMUSG00000030165 Klrd1 CD94 killer cell lectin-like receptor, subfamily D, member 1 protein-coding unique_peak2_25_238_-0.745445563339817_7.52814402631084_5.49941174818357 chr15 98099603 98100969 + 5.49941174818357 NA intron (NM_001163488, intron 1 of 22) intron (NM_001163488, intron 1 of 22) -6717 NM_144851 223870 Mm.384023 NM_144851 ENSMUSG00000033075 Senp1 2310046A20Rik|D15Ertd528e|E330036L07Rik|suPr-2 SUMO1/sentrin specific peptidase 1 protein-coding common_peak2_46_426_-0.534961172194473_8.47061167352325_5.49831493800246 chr11 118289202 118290227 + 5.49831493800246 NA intron (NM_001033528, intron 1 of 20) intron (NM_001033528, intron 1 of 20) 530 NM_001033528 72344 Mm.232293 NM_001033528 ENSMUSG00000033909 Usp36 2700002L06Rik|mKIAA1453 ubiquitin specific peptidase 36 protein-coding common_peak2_349_3064_0.174492254010067_11.6689174855832_5.49819920047968 chr10 115383522 115386290 + 5.49819920047968 NA promoter-TSS (NM_025780) promoter-TSS (NM_025780) -53 NM_001033261 216345 Mm.207621 NM_001033261 ENSMUSG00000034163 Zfc3h1 BC033596|Ccdc131|Psrc2 zinc finger, C3H1-type containing protein-coding common_peak2_136_1336_-0.288446193558494_10.2405606533141_5.49760307893218 chr12 84205467 84207866 + 5.49760307893218 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 12215 NM_001163501 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak1_22_212_-0.796248816132328_7.33658521215967_5.49759940969573-2 chr4 120977479 120977929 + 5.49759940969573 NA intron (NM_133716, intron 4 of 9) intron (NM_133716, intron 4 of 9) -4382 NR_105982 102465614 NR_105982 ENSMUSG00000106436 Mir7015 mmu-mir-7015 microRNA 7015 ncRNA common_peak1_22_212_-0.796248816132328_7.33658521215967_5.49759940969573 chr12 113098394 113098911 + 5.49759940969573 NA intron (NM_054081, intron 1 of 19) intron (NM_054081, intron 1 of 19) 374 NM_054081 116870 Mm.212577 NM_054081 ENSMUSG00000021144 Mta1 - metastasis associated 1 protein-coding common_peak1_35_123_0.777101362672148_7.34274699172295_5.49759940969573 chr3 129364545 129365282 + 5.49759940969573 NA Intergenic RMER17B|LTR|ERVK -32164 NM_007934 13809 Mm.1193 NM_007934 ENSMUSG00000028024 Enpep 6030431M22Rik|APA|Bp-1/6C3|Ly-51|Ly51 glutamyl aminopeptidase protein-coding unique_peak2_22_212_-0.796248816132328_7.33658521215967_5.49759940969573 chr3 138892933 138894352 + 5.49759940969573 NA intron (NR_121195, intron 3 of 7) intron (NR_121195, intron 3 of 7) 151434 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding unique_peak2_13_136_-1.03807964412896_6.57899226089605_5.4967267383749 chr12 33182353 33183571 + 5.4967267383749 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 35276 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_24_67_0.998552350886045_6.58673901669336_5.49672673837487 chr7 139684289 139684671 + 5.49672673837487 NA promoter-TSS (NM_001302546) promoter-TSS (NM_001302546) -665 NM_001302546 212124 Mm.425507 NM_177212 ENSMUSG00000049571 Cfap46 9330101J02Rik|E030019B06Rik|Gm170|Ttc40 cilia and flagella associated protein 46 protein-coding common_peak1_24_67_0.998552350886045_6.58673901669336_5.49672673837487-2 chr8 85429022 85429514 + 5.49672673837487 NA intron (NM_025722, intron 1 of 3) RMER5|LTR|ERV1 3573 NR_033144 66714 Mm.272748 NM_025722 ENSMUSG00000036934 4921524J17Rik - RIKEN cDNA 4921524J17 gene protein-coding common_peak2_249_2632_-0.201758715845001_11.2616124481236_5.49669792456148 chr1 191416154 191423216 + 5.49669792456148 NA Intergenic RMER17C2|LTR|ERVK -22644 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding unique_peak2_38_352_-0.59058092366332_8.16823391143952_5.4961326464315 chr17 32090728 32092353 + 5.4961326464315 NA promoter-TSS (NR_027316) promoter-TSS (NR_027316) -117 NR_027316 435518 Mm.328944 NR_027316 ENSMUSG00000002791 Pdxk-ps ENSMUSG00000002791|Gm9743 pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene pseudo common_peak1_38_352_-0.59058092366332_8.16823391143952_5.4961326464315 chr13 46776768 46777590 + 5.4961326464315 NA exon (NM_010617, exon 27 of 38) exon (NM_010617, exon 27 of 38) -49330 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak1_232_2429_-0.210629037619295_11.1414260796835_5.49532238761647 chr8 71722576 71725718 + 5.49532238761647 NA intron (NR_131256, intron 1 of 25) intron (NR_131256, intron 1 of 25) 1534 NR_131256 74015 Mm.22025 NM_028715 ENSMUSG00000070000 Fcho1 3322402E17Rik|N28152 FCH domain only 1 protein-coding common_peak2_151_1500_-0.271507124664732_10.4159546992883_5.49479013926625 chrX 96129161 96134476 + 5.49479013926625 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 35773 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_150_1002_0.29841449437337_10.1193131377989_5.49472683060909 chr8 70301860 70303252 + 5.49472683060909 NA promoter-TSS (NM_001024922) promoter-TSS (NM_001024922) -104 NM_001024922 234374 Mm.388127 NM_001024922 ENSMUSG00000057788 Ddx49 R27090_2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 protein-coding common_peak2_212_2193_-0.222053748402892_10.9883209362017_5.49462154806483 chr11 107101707 107105198 + 5.49462154806483 NA intron (NM_176850, intron 2 of 27) intron (NM_176850, intron 2 of 27) 28470 NM_176850 207165 Mm.343986 NM_176850 ENSMUSG00000040481 Bptf 9430093H17Rik|Falz bromodomain PHD finger transcription factor protein-coding common_peak2_238_1856_0.222346414157157_10.969931307014_5.49460552875515 chr6 28260453 28262836 + 5.49460552875515 NA promoter-TSS (NM_001081678) promoter-TSS (NM_001081678) -43 NM_001081678 627049 Mm.84441 NM_001081678 ENSMUSG00000039841 Zfp800 AA407452|Znf800 zinc finger protein 800 protein-coding common_peak2_101_965_-0.341596290521961_9.74508123357479_5.49451106589411 chr9 21029318 21032614 + 5.49451106589411 NA TTS (NM_023892) TTS (NM_023892) -1072 NM_008319 15898 Mm.4629 NM_008319 ENSMUSG00000032174 Icam5 CD50|ICAM-3|Icam3|TLN|Tlcn intercellular adhesion molecule 5, telencephalin protein-coding common_peak1_48_200_0.625824545731756_7.96396396404481_5.4936621957677 chr1 138325553 138326644 + 5.4936621957677 NA Intergenic Intergenic 52360 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_48_200_0.625824545731756_7.96396396404481_5.4936621957677 chr7 31115110 31116758 + 5.4936621957677 NA promoter-TSS (NM_008281) promoter-TSS (NM_008281) -608 NM_001110252 15451 Mm.19182 NM_008281 ENSMUSG00000001249 Hpn Hlb320 hepsin protein-coding common_peak1_139_904_0.312896354925678_9.97822215943341_5.49365223677312 chr12 112588465 112589928 + 5.49365223677312 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 412 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak1_117_715_0.348322938963925_9.65797724674622_5.49339675598018 chr5 43868631 43870121 + 5.49339675598018 NA intron (NM_007646, intron 1 of 7) intron (NM_007646, intron 1 of 7) 567 NM_007646 12494 Mm.249873 NM_007646 ENSMUSG00000029084 Cd38 ADPRC 1|Cd38-rs1|I-19 CD38 antigen protein-coding common_peak2_204_2100_-0.227311594729299_10.9232046493084_5.4925105059052 chr2 23155390 23157337 + 5.4925105059052 NA promoter-TSS (NM_013771) promoter-TSS (NM_013771) -142 NM_013771 27377 Mm.23335 NM_013771 ENSMUSG00000026775 Yme1l1 FtsH1|Ftsh YME1-like 1 (S. cerevisiae) protein-coding common_peak1_64_596_-0.444672600931909_8.99925082079885_5.49250866366749 chr13 30971427 30972377 + 5.49250866366749 NA intron (NM_025588, intron 1 of 27) RCHARR1|DNA|hAT-Charlie 2145 NM_025588 66482 Mm.293510 NM_025588 ENSMUSG00000021357 Exoc2 2410030I24Rik|AI648199|Sec5|Sec5l1 exocyst complex component 2 protein-coding common_peak1_70_654_-0.422191550577795_9.14425532113592_5.49135321330894 chr7 131362115 131363504 + 5.49135321330894 NA promoter-TSS (NM_026655) promoter-TSS (NM_026655) -111 NM_026655 68277 Mm.121122 NM_026655 ENSMUSG00000040177 2310057M21Rik 3110040E10Rik|AI429544 RIKEN cDNA 2310057M21 gene protein-coding common_peak1_46_188_0.640888663204945_7.88268675582355_5.49122412351656 chr12 71831030 71831729 + 5.49122412351656 NA intron (NM_026102, intron 1 of 25) CpG 311 NM_172464 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak2_46_188_0.640888663204945_7.88268675582355_5.49122412351656 chrX 7727810 7728984 + 5.49122412351656 NA promoter-TSS (NM_138602) promoter-TSS (NM_138602) -174 NM_138602 54637 Mm.28850 NM_138602 ENSMUSG00000031149 Praf2 AA986329|C78013|DXImx39e|JM4|Sfc20 PRA1 domain family 2 protein-coding common_peak1_231_2417_-0.211098281177488_11.1340493886604_5.49016524223584 chr7 28374871 28376813 + 5.49016524223584 NA TTS (NM_011756) TTS (NM_011756) -3180 NM_001083912 101497 Mm.235700 NM_138752 ENSMUSG00000037552 Plekhg2 AI194308|Clg|Cslg pleckstrin homology domain containing, family G (with RhoGef domain) member 2 protein-coding common_peak1_142_931_0.308004201928147_10.0181882456184_5.49009366575954 chr5 65435233 65436578 + 5.49009366575954 NA promoter-TSS (NM_009466) promoter-TSS (NM_009466) -63 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding common_peak2_143_940_0.306471382703199_10.0312866040801_5.48936488824058 chr5 65435100 65436612 + 5.48936488824058 NA promoter-TSS (NM_009466) promoter-TSS (NM_009466) -14 NM_009466 22235 Mm.344831 NM_009466 ENSMUSG00000029201 Ugdh Udpgdh UDP-glucose dehydrogenase protein-coding common_peak1_25_72_0.965596685760914_6.67262290176047_5.48920328212001 chr10 21222871 21223374 + 5.48920328212001 NA Intergenic Intergenic -62138 NM_010848 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding common_peak1_25_72_0.965596685760914_6.67262290176047_5.48920328212001-2 chr7 24901294 24901865 + 5.48920328212001 NA 3' UTR (NM_007655, exon 5 of 5) 3' UTR (NM_007655, exon 5 of 5) -1407 NM_001130150 16801 Mm.3181 NM_008488 ENSMUSG00000040940 Arhgef1 Lbcl2|Lsc Rho guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_25_72_0.965596685760914_6.67262290176047_5.48920328212001 chr7 46957944 46958606 + 5.48920328212001 NA intron (NM_001040695, intron 1 of 11) PB1D7|SINE|Alu 243 NM_001040695 54122 Mm.1999 NM_016855 ENSMUSG00000043262 Uevld 8430408E05Rik|Attp UEV and lactate/malate dehyrogenase domains protein-coding common_peak2_25_72_0.965596685760914_6.67262290176047_5.48920328212001-2 chr9 118072984 118073577 + 5.48920328212001 NA intron (NM_026442, intron 3 of 3) B1F|SINE|Alu 32758 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_67_625_-0.433257963585735_9.07338986513975_5.4886880372123 chr7 90137223 90139344 + 5.4886880372123 NA intron (NM_001252520, intron 1 of 20) intron (NM_001252520, intron 1 of 20) 8051 NM_001252520 233489 Mm.235175 NM_146194 ENSMUSG00000039361 Picalm CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114 phosphatidylinositol binding clathrin assembly protein protein-coding common_peak2_67_625_-0.433257963585735_9.07338986513975_5.4886880372123-2 chrX 73915082 73916772 + 5.4886880372123 NA TTS (NM_019870) TTS (NM_019870) -4629 NM_001162424 171207 Mm.482337 NM_138630 ENSMUSG00000031389 Arhgap4 A130009C12Rik|A530015A20Rik|Rgc1|c1|mKIAA0131 Rho GTPase activating protein 4 protein-coding common_peak2_237_1846_0.222716530443559_10.9623264162042_5.48825720992407 chr12 112672996 112675911 + 5.48825720992407 NA promoter-TSS (NM_001165894) promoter-TSS (NM_001165894) -177 NM_009652 11651 Mm.6645 NM_009652 ENSMUSG00000001729 Akt1 Akt|LTR-akt|PKB|PKB/Akt|PKBalpha|Rac thymoma viral proto-oncogene 1 protein-coding common_peak2_85_458_0.429989138026498_9.05734491242706_5.48656790928931 chr6 8734465 8736444 + 5.48656790928931 NA intron (NM_001252266, intron 5 of 11) intron (NM_001252266, intron 5 of 11) 23004 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak2_22_58_1.05581775473167_6.41055192672768_5.48478949321843 chr14 73058490 73058979 + 5.48478949321843 NA Intergenic Intergenic -9620 NM_001162412 70086 Mm.158324 NM_133720 ENSMUSG00000033470 Cysltr2 2300001H05Rik|CYSLT2R|Cltr2|Cyslt2 cysteinyl leukotriene receptor 2 protein-coding common_peak1_22_58_1.05581775473167_6.41055192672768_5.48478949321843 chr17 36044119 36044623 + 5.48478949321843 NA intron (NM_001034909, intron 1 of 2) URR1B|DNA|hAT-Charlie 1410 NM_001034909 547347 Mm.484641 NM_001034909 ENSMUSG00000073407 Gm6034 EG547347|H2-gs14-2 predicted gene 6034 protein-coding unique_peak1_22_58_1.05581775473167_6.41055192672768_5.48478949321843 chr15 66788116 66788604 + 5.48478949321843 NA intron (NM_001029841, intron 5 of 7) intron (NM_001029841, intron 5 of 7) 43469 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_22_58_1.05581775473167_6.41055192672768_5.48478949321843-2 chr4 102504954 102505454 + 5.48478949321843 NA intron (NM_001177983, intron 4 of 5) B4A|SINE|B4 -64856 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding unique_peak1_22_58_1.05581775473167_6.41055192672768_5.48478949321843-2 chr7 67951946 67952441 + 5.48478949321843 NA promoter-TSS (NM_010513) promoter-TSS (NM_010513) -64 NM_010513 16001 Mm.275742 NM_010513 ENSMUSG00000005533 Igf1r A330103N21Rik|CD221|D930020L01|IGF-1R|hyft insulin-like growth factor I receptor protein-coding common_peak1_119_732_0.344211666836605_9.68977522155211_5.484366661177 chr14 30653810 30654944 + 5.484366661177 NA promoter-TSS (NM_177815) promoter-TSS (NM_177815) 2 NM_177815 328370 Mm.259657 NM_177815 ENSMUSG00000052395 Rft1 D930025H04 RFT1 homolog protein-coding common_peak2_102_976_-0.340666868191645_9.76188131787256_5.48262365260649 chr13 24414372 24417754 + 5.48262365260649 NA intron (NM_001284520, intron 1 of 14) intron (NM_001284520, intron 1 of 14) 941 NM_001284520 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding common_peak1_235_2464_-0.208620903850735_11.1630614793399_5.48081440168662 chr11 20111955 20113916 + 5.48081440168662 NA promoter-TSS (NM_146243) promoter-TSS (NM_146243) 16 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding common_peak1_41_158_0.691203999700499_7.65848495513461_5.47915049563934 chr6 38874136 38875028 + 5.47915049563934 NA intron (NM_010433, intron 1 of 14) intron (NM_010433, intron 1 of 14) 1608 NM_010433 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding common_peak1_41_158_0.691203999700499_7.65848495513461_5.47915049563934-2 chr7 46710226 46710791 + 5.47915049563934 NA exon (NM_030233, exon 1 of 12) exon (NM_030233, exon 1 of 12) 143 NM_030233 78935 Mm.289866 NM_030233 ENSMUSG00000006763 Saal1 5031425D22Rik|SPACIA1 serum amyloid A-like 1 protein-coding common_peak1_313_3420_-0.176114443175893_11.65214516718_5.4791159330069 chr19 8818549 8821250 + 5.4791159330069 NA promoter-TSS (NM_027412) promoter-TSS (NM_027412) 498 NM_001081196 68693 Mm.476519 NM_001081196 ENSMUSG00000071659 Hnrnpul2 1110031M08Rik|AI465155|Hnrpul2 heterogeneous nuclear ribonucleoprotein U-like 2 protein-coding common_peak2_31_102_0.836365047128306_7.10468305074737_5.47862023412667 chr15 77733667 77734418 + 5.47862023412667 NA intron (NM_001168660, intron 1 of 2) MTB_Mm|LTR|ERVL-MaLR 4921 NM_001168660 71898 Mm.422856 NM_173743 ENSMUSG00000068246 Apol9b 2310016F22Rik apolipoprotein L 9b protein-coding common_peak1_31_102_0.836365047128306_7.10468305074737_5.47862023412667 chr13 33026636 33027295 + 5.47862023412667 NA promoter-TSS (NM_011452) promoter-TSS (NM_011452) -449 NM_011452 20706 Mm.45371 NM_011452 ENSMUSG00000021403 Serpinb9b 1600019A21Rik|R86|SPI-CI|Spi10|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9b protein-coding common_peak2_182_1300_0.26324872048246_10.477029606959_5.4785460887794 chr6 134829280 134831116 + 5.4785460887794 NA promoter-TSS (NM_177687) promoter-TSS (NM_177687) -1 NM_177687 232430 Mm.267010 NM_177687 ENSMUSG00000032652 Crebl2 AI046348|B230205M03 cAMP responsive element binding protein-like 2 protein-coding unique_peak1_13_22_1.53639048277456_5.29175719744429_5.47729977740498 chrX 102187050 102187458 + 5.47729977740498 NA intron (NM_009094, intron 4 of 6) intron (NM_009094, intron 4 of 6) 2137 NM_009094 20102 Mm.66 NM_009094 ENSMUSG00000031320 Rps4x Rps4|Rps4-1 ribosomal protein S4, X-linked protein-coding common_peak1_71_663_-0.417129447101546_9.16647470779615_5.47715199548708 chr12 25359044 25360161 + 5.47715199548708 NA Intergenic Intergenic 230428 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_77_399_0.455699571019492_8.87170597528447_5.47656457074441 chr14 77866704 77869272 + 5.47656457074441 NA intron (NM_025384, intron 1 of 5) intron (NM_025384, intron 1 of 5) 6929 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding unique_peak2_55_509_-0.481176375654577_8.75376524903157_5.47650081953874 chr6 47667690 47669325 + 5.47650081953874 NA promoter-TSS (NR_002841).9 promoter-TSS (NR_002841).9 -416 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_34_316_-0.626893315615874_7.99489237233147_5.47586352139132 chr19 11292589 11294013 + 5.47586352139132 NA intron (NR_045317, intron 2 of 2) intron (NR_045317, intron 2 of 2) -9488 NM_183190 269063 Mm.268940 NM_183190 ENSMUSG00000054523 Ms4a5 - membrane-spanning 4-domains, subfamily A, member 5 protein-coding common_peak2_34_316_-0.626893315615874_7.99489237233147_5.47586352139132-2 chr6 65613555 65614796 + 5.47586352139132 NA intron (NM_001001495, intron 6 of 7) MTD|LTR|ERVL-MaLR 23777 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak2_91_863_-0.363202075697245_9.57328646431485_5.47517852100118 chr13 98807787 98811248 + 5.47517852100118 NA intron (NM_172591, intron 1 of 25) intron (NM_172591, intron 1 of 25) 5932 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak2_229_1765_0.226909074509718_10.8997241649033_5.4746336734898 chr14 67932137 67934666 + 5.4746336734898 NA 5' UTR (NM_177780, exon 1 of 52) 5' UTR (NM_177780, exon 1 of 52) 171 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding common_peak2_331_3647_-0.170159522623679_11.7478102528529_5.47422225415256 chr2 166466743 166472919 + 5.47422225415256 NA Intergenic Intergenic 22380 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak2_82_772_-0.3848187347565_9.4019152365466_5.47414920338364 chr7 102064499 102066347 + 5.47414920338364 NA promoter-TSS (NM_029211) promoter-TSS (NM_029211) -68 NR_104582 102443351 Mm.292904 NM_011644 ENSMUSG00000070425 Xntrpc Xndr-trpc2 Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough protein-coding common_peak2_102_592_0.379659589230736_9.40171808916137_5.47414920338344 chr13 69809348 69810900 + 5.47414920338344 NA intron (NM_138596, intron 1 of 3) CpG 242 NM_138596 28077 Mm.52583 NM_138596 ENSMUSG00000021598 Med10 AA959813|AI385605|C78613|D13Wsu50e mediator complex subunit 10 protein-coding common_peak2_30_281_-0.672869147664487_7.80311677856655_5.47412312336239-2 chr9 97307172 97308549 + 5.47412312336239 NA Intergenic Intergenic 62098 NM_030219 78911 Mm.108347 NM_030219 ENSMUSG00000032451 Trim42 4930486B16Rik tripartite motif-containing 42 protein-coding common_peak2_30_281_-0.672869147664487_7.80311677856655_5.47412312336239 chr5 117119283 117119973 + 5.47412312336239 NA promoter-TSS (NM_001199685) promoter-TSS (NM_001199685) -501 NM_001199685 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding common_peak1_30_281_-0.672869147664487_7.80311677856655_5.47412312336239 chr18 80200084 80200682 + 5.47412312336239 NA intron (NM_199197, intron 1 of 5) CpG 236 NM_199197 68731 Mm.186936 NM_199197 ENSMUSG00000024570 Rbfa 1110032A13Rik|AI595940 ribosome binding factor A protein-coding common_peak2_97_924_-0.349821007306634_9.67839905175036_5.47290292393401 chr10 120112132 120113787 + 5.47290292393401 NA promoter-TSS (NM_080446) promoter-TSS (NM_080446) 6 NM_080446 117599 Mm.214703 NM_080446 ENSMUSG00000020228 Helb AI447783|D10Ertd664e helicase (DNA) B protein-coding common_peak2_284_2343_0.197847452006247_11.2936805804254_5.47124511390246 chr17 8282404 8284935 + 5.47124511390246 NA promoter-TSS (NM_018819) promoter-TSS (NM_018819) -144 NM_018819 55951 Mm.288510 NM_018819 ENSMUSG00000023861 Mpc1 0610006G08Rik|3830411I18Rik|Brp44l mitochondrial pyruvate carrier 1 protein-coding common_peak1_165_1140_0.280035104066023_10.2961006283217_5.47124503237495 chr2 39225460 39226776 + 5.47124503237495 NA intron (NM_024209, intron 1 of 6) CpG 220 NM_024209 67857 Mm.389242 NM_024209 ENSMUSG00000026753 Ppp6c 2310003C10Rik protein phosphatase 6, catalytic subunit protein-coding common_peak2_62_292_0.526852305529534_8.45818300718702_5.46957062032263 chr14 24486335 24487491 + 5.46957062032263 NA exon (NM_001081247, exon 1 of 31) exon (NM_001081247, exon 1 of 31) 133 NM_001081247 218832 Mm.343610 NM_183157 ENSMUSG00000025280 Polr3a 9330175N20Rik|BC053071|RPC1|RPC155 polymerase (RNA) III (DNA directed) polypeptide A protein-coding common_peak1_86_466_0.425519090956191_9.08003828518776_5.46956352376957 chr6 8209092 8209868 + 5.46956352376957 NA intron (NM_145374, intron 1 of 11) CpG 253 NM_145374 252875 Mm.257151 NM_145374 ENSMUSG00000042447 Mios C81488 missing oocyte, meiosis regulator, homolog (Drosophila) protein-coding common_peak1_244_2571_-0.203693103538942_11.2268283755585_5.46928092965428 chr3 104780785 104782848 + 5.46928092965428 NA intron (NM_027982, intron 1 of 9) CpG 760 NM_027982 71887 Mm.379204 NM_027982 ENSMUSG00000002228 Ppm1j 2310008J22Rik|PP2Czeta|Ppp2cz protein phosphatase 1J protein-coding common_peak2_164_1131_0.280767291707319_10.2850418886855_5.46806223365 chr8 104441983 104443383 + 5.46806223365 NA intron (NM_001013380, intron 1 of 12) CpG-14406 364 NM_001013380 234663 Mm.289583 NM_001013380 ENSMUSG00000035770 Dync1li2 AA409702|C920003I06|Dncli2|Dnclic2|LIC2 dynein, cytoplasmic 1 light intermediate chain 2 protein-coding common_peak1_74_377_0.467907284068595_8.79619606625537_5.46683990302318 chr17 57247024 57247807 + 5.46683990302318 NA promoter-TSS (NM_001308074) promoter-TSS (NM_001308074) 55 NM_001308074 78308 Mm.28468 NM_030084 ENSMUSG00000005823 Gpr108 1810015L19Rik|AA589464|C79132|Lustr2 G protein-coupled receptor 108 protein-coding common_peak2_92_873_-0.360672748613009_9.59115309519409_5.46538474661237-2 chr2 152293259 152294737 + 5.46538474661237 NA exon (NM_024196, exon 1 of 8) exon (NM_024196, exon 1 of 8) 126 NM_024196 67231 Mm.288733 NM_024196 ENSMUSG00000027465 Tbc1d20 1110028I04Rik|2810442O16Rik|AI414693|bs TBC1 domain family, member 20 protein-coding common_peak2_92_873_-0.360672748613009_9.59115309519409_5.46538474661237 chr2 34770892 34771966 + 5.46538474661237 NA promoter-TSS (NM_022310) promoter-TSS (NM_022310) -661 NM_001163434 14828 Mm.330160 NM_022310 ENSMUSG00000026864 Hspa5 AL022860|AU019543|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|SEZ-7|Sez7|baffled|mBiP heat shock protein 5 protein-coding common_peak2_163_1122_0.281525675037537_10.2739050499194_5.46500583935201 chr5 135707494 135712336 + 5.46500583935201 NA intron (NM_008898, intron 1 of 15) MTD|LTR|ERVL-MaLR 20770 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak1_239_1868_0.220442512411614_10.978272109951_5.46373766734907 chr1 136139086 136141197 + 5.46373766734907 NA intron (NM_001039472, intron 1 of 34) intron (NM_001039472, intron 1 of 34) 8740 NM_001039472 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding common_peak2_78_406_0.453214106847069_8.89549203768978_5.46371466325864 chr12 25413681 25415506 + 5.46371466325864 NA Intergenic Intergenic 285419 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak2_17_169_-0.904705574265035_6.95703814900518_5.4613781768167 chr10 72654097 72654773 + 5.4613781768167 NA promoter-TSS (NM_025635) promoter-TSS (NM_025635) -411 NM_025635 52696 Mm.62876 NM_025635 ENSMUSG00000019923 Zwint 2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1 ZW10 interactor protein-coding common_peak1_249_1971_0.215289253823149_11.0530884632895_5.46047523345259 chr12 78980105 78981892 + 5.46047523345259 NA intron (NM_178745, intron 1 of 2) intron (NM_178745, intron 1 of 2) 2480 NM_001170401 268567 Mm.341747 NM_178745 ENSMUSG00000046157 Tmem229b 6330442E10Rik|9830138K24|AU019070 transmembrane protein 229B protein-coding common_peak1_113_682_0.355369262446441_9.59342639951331_5.45871271789547 chr7 66125518 66127642 + 5.45871271789547 NA intron (NM_001081163, intron 2 of 2) intron (NM_001081163, intron 2 of 2) 17065 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_29_272_-0.684100708322149_7.75070678675878_5.45870355845381 chr8 72162943 72163579 + 5.45870355845381 NA intron (NM_023126, intron 1 of 7) intron (NM_023126, intron 1 of 7) 2061 NM_023126 17274 Mm.162811 NM_023126 ENSMUSG00000003037 Rab8a AA409338|Mel RAB8A, member RAS oncogene family protein-coding unique_peak2_29_272_-0.684100708322149_7.75070678675878_5.45870355845381 chr8 115397515 115398820 + 5.45870355845381 NA Intergenic Intergenic 308727 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_390_3540_0.162251918297024_11.8710670875394_5.45843721264956 chr7 66113052 66118113 + 5.45843721264956 NA intron (NM_001081163, intron 1 of 2) intron (NM_001081163, intron 1 of 2) 6067 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_65_313_0.509311509955609_8.54927650386943_5.458337058902 chr15 97784135 97785175 + 5.458337058902 NA intron (NM_026353, intron 1 of 2) CpG 290 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding common_peak2_254_2024_0.212070171346427_11.0897412783326_5.45780626879927 chr19 45573963 45579903 + 5.45780626879927 NA intron (NM_172639, intron 4 of 5) intron (NM_172639, intron 4 of 5) 16318 NM_172639 226162 Mm.21978 NM_172639 ENSMUSG00000041035 Dpcd 5330431N19Rik|Ndac deleted in primary ciliary dyskinesia protein-coding common_peak2_128_809_0.328083588635245_9.82581989208961_5.4571533247936 chr14 59340314 59342381 + 5.4571533247936 NA promoter-TSS (NM_001164327) promoter-TSS (NM_001164327) -17 NM_001164327 236451 Mm.247736 NM_001164327 ENSMUSG00000091649 Phf11b EG236451|Gm4902 PHD finger protein 11B protein-coding common_peak1_184_1868_-0.240161615655428_10.7479700459174_5.45528376547786 chr11 121236323 121237921 + 5.45528376547786 NA promoter-TSS (NM_026272) promoter-TSS (NM_026272) -114 NM_026272 67608 Mm.291832 NM_026272 ENSMUSG00000000056 Narf 4430402O11Rik nuclear prelamin A recognition factor protein-coding common_peak1_105_616_0.373227397480051_9.45574037788944_5.45470682302504 chr2 127133426 127134734 + 5.45470682302504 NA promoter-TSS (NM_144818) promoter-TSS (NM_144818) -126 NM_144818 215387 Mm.29786 NM_144818 ENSMUSG00000034906 Ncaph A730011O11Rik|Brrn1|HCAP-H|mKIAA0074 non-SMC condensin I complex, subunit H protein-coding common_peak2_142_1400_-0.28005089384839_10.3122157935066_5.45423171238342 chr8 72238957 72241189 + 5.45423171238342 NA promoter-TSS (NM_007456) promoter-TSS (NM_007456) -59 NM_007456 11767 Mm.290086 NM_007456 ENSMUSG00000003033 Ap1m1 AA408894|AP47|Adtm1A|Cltnm|mu1A adaptor-related protein complex AP-1, mu subunit 1 protein-coding common_peak2_87_474_0.421238661848353_9.10240303414249_5.45347823540105 chr11 54951806 54954230 + 5.45347823540105 NA intron (NM_001271455, intron 1 of 17) intron (NM_001271455, intron 1 of 17) 9922 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding unique_peak2_42_388_-0.557899174732242_8.32467675762007_5.45330097555572 chr9 124043303 124045376 + 5.45330097555572 NA Intergenic Intergenic 22368 NM_009914 12771 Mm.57050 NM_009914 ENSMUSG00000035448 Ccr3 CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3 chemokine (C-C motif) receptor 3 protein-coding common_peak2_107_1027_-0.330192359981572_9.84052836920309_5.45311640983467 chr10 81704272 81705710 + 5.45311640983467 NA intron (NM_001243067, intron 1 of 3) CpG 166 NM_001243067 73610 Mm.490466 NM_001243067 ENSMUSG00000096795 Zfp433 1700123A16Rik zinc finger protein 433 protein-coding common_peak2_380_3424_0.164456937592078_11.8241167415313_5.4529727391785 chr17 35240697 35247352 + 5.4529727391785 NA promoter-TSS (NR_105941) promoter-TSS (NR_105941) -51 NR_105941 102465589 NR_105941 ENSMUSG00000098499 Mir6975 Gm27693|mmu-mir-6975 microRNA 6975 ncRNA common_peak1_34_118_0.78662795121559_7.28813173891574_5.45292226073615 chr9 66261872 66262592 + 5.45292226073615 NA intron (NM_010019, intron 9 of 11) intron (NM_010019, intron 9 of 11) -88218 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak2_34_118_0.78662795121559_7.28813173891574_5.45292226073615 chr3 135607952 135608828 + 5.45292226073615 NA intron (NM_008689, intron 12 of 24) intron (NM_008689, intron 12 of 24) 83157 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_53_232_0.584633733371671_8.15650301134012_5.4524110610974 chr2 10047842 10048656 + 5.4524110610974 NA exon (NM_027748, exon 1 of 7) exon (NM_027748, exon 1 of 7) 360 NM_027748 209361 Mm.86343 NM_027748 ENSMUSG00000025782 Taf3 140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140 TATA-box binding protein associated factor 3 protein-coding unique_peak1_16_33_1.31607341972383_5.74549955111226_5.45206132357611 chr19 37380081 37380500 + 5.45206132357611 NA intron (NM_010615, intron 1 of 21) B2_Mm2|SINE|B2 3887 NM_010615 16551 Mm.42203 NM_010615 ENSMUSG00000012443 Kif11 Eg5|Kif8|Kifl1|Knsl1 kinesin family member 11 protein-coding unique_peak1_16_33_1.31607341972383_5.74549955111226_5.45206132357611-2 chr2 132575771 132576092 + 5.45206132357611 NA intron (NM_001291051, intron 1 of 18) intron (NM_001291051, intron 1 of 18) 2317 NM_001291050 74182 Mm.211211 NM_027096 ENSMUSG00000027346 Gpcpd1 2310004G06Rik|2310032D16Rik|AU015213|Gde5|Prei4|mKIAA1434 glycerophosphocholine phosphodiesterase 1 protein-coding common_peak1_16_33_1.31607341972383_5.74549955111226_5.45206132357611 chr6 128771923 128772334 + 5.45206132357611 NA Intergenic Intergenic 16513 NM_008527 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak1_272_2214_0.203388575430949_11.2147852711579_5.45120208063689 chr12 70974155 70975637 + 5.45120208063689 NA intron (NM_001310596, intron 1 of 10) CpG 273 NM_011184 19167 Mm.296338 NM_011184 ENSMUSG00000060073 Psma3 Lmpc8 proteasome (prosome, macropain) subunit, alpha type 3 protein-coding common_peak1_183_1857_-0.241237048730074_10.7389162620176_5.4506794708114 chr2 129242879 129244947 + 5.4506794708114 NA Intergenic Intergenic 24944 NR_045838 329513 Mm.473529 NM_177847 ENSMUSG00000056738 A730036I17Rik - RIKEN cDNA A730036I17 gene ncRNA common_peak1_33_307_-0.636637968534375_7.94846755642771_5.45022079932977 chr10 81404398 81404996 + 5.45022079932977 NA intron (NM_008688, intron 8 of 9) B1F|SINE|Alu 11600 NR_106141 102465778 NR_106141 ENSMUSG00000105379 Mir1191b mmu-mir-1191b microRNA 1191b ncRNA common_peak1_47_194_0.633057465528841_7.92385904651403_5.44862868538394 chr5 113633594 113634573 + 5.44862868538394 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 16307 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak2_154_1040_0.29103343831321_10.169271072456_5.44816152319438 chr17 31827294 31832192 + 5.44816152319438 NA Intergenic Intergenic 26049 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak2_56_518_-0.475092008807708_8.78204472395403_5.44793164808694 chr15 66754852 66757099 + 5.44793164808694 NA intron (NM_009375, intron 35 of 47) MLT1A0|LTR|ERVL-MaLR 75854 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_30_97_0.851972360619098_7.04069602442476_5.44772096467406 chr16 91455406 91456006 + 5.44772096467406 NA Intergenic C-rich|Low_complexity|Low_complexity -9398 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak1_18_177_-0.875369227569507_7.03804881718164_5.44772096467406-2 chr5 32148963 32149422 + 5.44772096467406 NA intron (NM_008037, intron 2 of 3) intron (NM_008037, intron 2 of 3) 12720 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_18_177_-0.875369227569507_7.03804881718164_5.44772096467406 chr11 53784932 53785344 + 5.44772096467406 NA TTS (NR_033332) TTS (NR_033332) 14665 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding unique_peak2_10_111_-1.17416949055001_6.2202701767826_5.44724411855703 chr17 48041544 48042320 + 5.44724411855703 NA Intergenic Intergenic -3639 NM_029689 76651 Mm.76918 NM_029689 ENSMUSG00000094928 1700122O11Rik - RIKEN cDNA 1700122O11 gene protein-coding common_peak2_40_152_0.704055422372774_7.60941555387904_5.44702763067099 chr9 14285038 14285980 + 5.44702763067099 NA intron (NM_030261, intron 1 of 9) intron (NM_030261, intron 1 of 9) 9208 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_494_4803_0.139539614986848_12.2997902431991_5.44662589017755 chr10 79854436 79858751 + 5.44662589017755 NA intron (NM_001283013, intron 2 of 12) intron (NM_001283013, intron 2 of 12) -1622 NR_029447 414101 Mm.401339 NR_029447 E130317F20Rik - RIKEN cDNA E130317F20 gene ncRNA common_peak1_28_263_-0.695730804845886_7.69652871693551_5.44626030141322 chr17 31788584 31789272 + 5.44626030141322 NA Intergenic Intergenic 66864 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding unique_peak2_9_102_-1.2219786107388_6.07551122181382_5.44502770318521 chr1 181016725 181017640 + 5.44502770318521 NA intron (NM_001312918, intron 1 of 8) intron (NM_001312918, intron 1 of 8) 387 NM_010145 13849 Mm.9075 NM_010145 ENSMUSG00000038776 Ephx1 EH|Eph-1|Eph1|Epxh1|mEH epoxide hydrolase 1, microsomal protein-coding common_peak2_9_102_-1.2219786107388_6.07551122181382_5.44502770318521 chr13 59557498 59557989 + 5.44502770318521 NA promoter-TSS (NM_023328) promoter-TSS (NM_023328) -396 NM_023328 67269 Mm.153008 NM_023328 ENSMUSG00000021557 Agtpbp1 1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd ATP/GTP binding protein 1 protein-coding unique_peak2_9_102_-1.2219786107388_6.07551122181382_5.44502770318521-2 chr11 57958195 57959069 + 5.44502770318521 NA Intergenic Intergenic -50432 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_184_1320_0.260474486842902_10.4976519946683_5.44443832681954 chr11 116376054 116381092 + 5.44443832681954 NA intron (NM_027258, intron 2 of 18) intron (NM_027258, intron 2 of 18) 34459 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak2_191_1948_-0.234905973606725_10.8110653884545_5.44396902242598 chr3 137832219 137835372 + 5.44396902242598 NA Intergenic Intergenic -30692 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding unique_peak2_19_185_-0.848024583477255_7.1151465193694_5.44163617142235 chr1 52637963 52639250 + 5.44163617142235 NA intron (NR_024590, intron 2 of 8) URR1B|DNA|hAT-Charlie 7901 NM_001142647 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding unique_peak2_12_127_-1.07119106654542_6.46440446672729_5.44118601598389 chr16 7419471 7420386 + 5.44118601598389 NA Intergenic Intergenic 350093 NM_183188 268859 Mm.370334 NM_021477 ENSMUSG00000008658 Rbfox1 A2bp|A2bp1|Hrnbp1|fox-1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding unique_peak2_12_127_-1.07119106654542_6.46440446672729_5.44118601598389-4 chrX 77788911 77789762 + 5.44118601598389 NA intron (NM_016979, intron 1 of 8) intron (NM_016979, intron 1 of 8) 6624 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding unique_peak2_12_127_-1.07119106654542_6.46440446672729_5.44118601598389-3 chr7 106295992 106297120 + 5.44118601598389 NA Intergenic Intergenic 27972 NR_030720 668128 Mm.484022 NR_030720 Gm8989 EG668128|Gm21911 very large inducible GTPase 1 pseudogene pseudo unique_peak2_12_127_-1.07119106654542_6.46440446672729_5.44118601598389-2 chr6 52191885 52192465 + 5.44118601598389 NA promoter-TSS (NM_008265) promoter-TSS (NM_008265) -472 NM_008265 15401 Mm.439647 NM_008265 ENSMUSG00000000942 Hoxa4 AV206827|Hox-1.4 homeobox A4 protein-coding common_peak1_61_566_-0.453910409021566_8.92024972043145_5.44111284433415 chr1 185204109 185204863 + 5.44111284433415 NA intron (NM_001163754, intron 1 of 34) intron (NM_001163754, intron 1 of 34) 318 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding common_peak2_61_566_-0.453910409021566_8.92024972043145_5.44111284433415 chr10 42056606 42058337 + 5.44111284433415 NA Intergenic Intergenic -39089 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak2_480_4629_0.141992088138645_12.2477925222169_5.44079211505884 chr4 62679259 62687233 + 5.44079211505884 NA intron (NM_001310706, intron 1 of 6) intron (NM_001310706, intron 1 of 6) 9272 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_85_801_-0.375118945014615_9.45989895394761_5.44009767706034 chr7 100705825 100707191 + 5.44009767706034 NA promoter-TSS (NM_178764) promoter-TSS (NM_178764) -194 NM_178764 319604 Mm.260362 NM_178764 ENSMUSG00000029461 Fam168a 2610030B18Rik|B930006L02Rik|mKIAA0280 family with sequence similarity 168, member A protein-coding unique_peak2_14_144_-0.997864968603587_6.68097660571314_5.4395444601262 chr1 125426301 125427615 + 5.4395444601262 NA intron (NM_023735, intron 1 of 11) intron (NM_023735, intron 1 of 11) 8769 NM_023735 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak2_571_5784_0.127313724960286_12.561758106475_5.43803948800677 chr7 45919115 45924967 + 5.43803948800677 NA promoter-TSS (NM_010129) promoter-TSS (NM_010129) -615 NM_010129 13732 Mm.20829 NM_010129 ENSMUSG00000040212 Emp3 H-4|H4|HNMP-1|MI-35|Ymp epithelial membrane protein 3 protein-coding common_peak2_117_716_0.346309407526277_9.65898401246504_5.43751536398437 chr7 13009134 13010394 + 5.43751536398437 NA promoter-TSS (NM_001024699) promoter-TSS (NM_001024699) 36 NM_001024699 232879 Mm.279272 NM_001024699 ENSMUSG00000049600 Zbtb45 BB161562|Gm157|Zfp499 zinc finger and BTB domain containing 45 protein-coding unique_peak2_27_254_-0.707788686840932_7.64045909343839_5.43714832756485 chr10 3509907 3511689 + 5.43714832756485 NA Intergenic Intergenic -29481 NM_027391 70337 Mm.24153 NM_027391 ENSMUSG00000019762 Iyd 0610009A07Rik|AI265638|Dehal1 iodotyrosine deiodinase protein-coding common_peak1_27_254_-0.707788686840932_7.64045909343839_5.43714832756485 chr11 21549245 21549799 + 5.43714832756485 NA Intergenic B3|SINE|B2 22412 NM_008618 17449 Mm.212703 NM_008618 ENSMUSG00000020321 Mdh1 B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2 malate dehydrogenase 1, NAD (soluble) protein-coding unique_peak2_27_254_-0.707788686840932_7.64045909343839_5.43714832756485-2 chr5 129846190 129847551 + 5.43714832756485 NA promoter-TSS (NM_026445) promoter-TSS (NM_026445) -120 NM_026445 67902 Mm.103546 NM_026445 ENSMUSG00000025538 Sumf2 2610040F05Rik sulfatase modifying factor 2 protein-coding common_peak2_118_724_0.345235185337348_9.67445477757097_5.43630494048636 chr2 31973729 31975360 + 5.43630494048636 NA promoter-TSS (NM_172268) promoter-TSS (NM_172268) 94 NM_172268 227720 Mm.289686 NM_172268 ENSMUSG00000001855 Nup214 BC039282|CAN|D2H9S46E nucleoporin 214 protein-coding common_peak1_49_207_0.612187785181649_8.00653361073192_5.43582909575829 chr5 146655169 146656129 + 5.43582909575829 NA Intergenic Intergenic -70410 NM_001010941 14738 Mm.153539 NM_008151 ENSMUSG00000041468 Gpr12 Gpcr01|Gpcr12|Gpcr20|Gpcr21 G-protein coupled receptor 12 protein-coding common_peak2_49_207_0.612187785181649_8.00653361073192_5.43582909575829 chr3 105910330 105911345 + 5.43582909575829 NA intron (NM_027025, intron 1 of 6) intron (NM_027025, intron 1 of 6) 6416 NM_009631 11542 Mm.235024 NM_009631 ENSMUSG00000000562 Adora3 A3AR|A3R|AA3R|ARA3|Gpcr2 adenosine A3 receptor protein-coding common_peak1_81_761_-0.385591611241539_9.38085138187255_5.43521823823344 chr11 101641974 101643183 + 5.43521823823344 NA Intergenic Intergenic 14629 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding common_peak2_37_135_0.739513673332907_7.45721967791679_5.43431422268392 chr4 122933033 122934222 + 5.43431422268392 NA Intergenic B3|SINE|B2 27561 NM_029662 76574 Mm.331842 NM_029662 ENSMUSG00000028655 Mfsd2a 1700018O18Rik|Mfsd2|NLS1 major facilitator superfamily domain containing 2A protein-coding common_peak1_177_1788_-0.245306992101364_10.6822841760012_5.43393564449904 chr11 98468603 98471591 + 5.43393564449904 NA intron (NM_011771, intron 7 of 7) intron (NM_011771, intron 7 of 7) 23263 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak2_66_320_0.504114213027421_8.57848659363601_5.43363573421476 chr2 144599569 144600732 + 5.43363573421476 NA intron (NM_025314, intron 1 of 5) CpG 197 NM_025314 66044 Mm.28109 NM_025314 ENSMUSG00000027430 Dtd1 0610006H08Rik|DUE-B|Hars2 D-tyrosyl-tRNA deacylase 1 protein-coding common_peak1_26_245_-0.720306938499645_7.58236103608942_5.43178155073574 chr1 43163125 43163574 + 5.43178155073574 NA intron (NM_001289533, intron 1 of 5) intron (NM_001289533, intron 1 of 5) 612 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak2_26_245_-0.720306938499645_7.58236103608942_5.43178155073574 chr13 55463731 55465201 + 5.43178155073574 NA intron (NM_001030296, intron 1 of 2) CpG 199 NM_001030296 432763 Mm.315457 NM_001030296 ENSMUSG00000034686 Prr7 XM_484263 proline rich 7 (synaptic) protein-coding common_peak2_26_245_-0.720306938499645_7.58236103608942_5.43178155073574 chr6 38359676 38360807 + 5.43178155073574 NA Intergenic Intergenic -5638 NM_028421 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding common_peak2_237_2486_-0.206506110790908_11.1769377368215_5.43162240376443 chr11 6545957 6548920 + 5.43162240376443 NA intron (NM_001190343, intron 1 of 8) intron (NM_001190343, intron 1 of 8) 551 NM_001190343 216527 Mm.221271 NM_146014 ENSMUSG00000000378 Ccm2 BC029157 cerebral cavernous malformation 2 protein-coding common_peak2_36_334_-0.608233634133725_8.08390046827827_5.43154762990734 chr1 171043991 171045164 + 5.43154762990734 NA Intergenic Intergenic 14826 NM_010188 14131 Mm.22119 NM_010188 ENSMUSG00000059498 Fcgr3 CD16 Fc receptor, IgG, low affinity III protein-coding common_peak1_191_1388_0.253781517669772_10.5667216428163_5.43131749313968 chr4 86856433 86858153 + 5.43131749313968 NA promoter-TSS (NM_009096) promoter-TSS (NM_009096) 74 NM_009096 20104 Mm.379007 NM_009096 ENSMUSG00000028495 Rps6 S6R ribosomal protein S6 protein-coding common_peak2_176_1777_-0.24637868763466_10.6728502650124_5.42990888292124 chr5 139198847 139201771 + 5.42990888292124 NA promoter-TSS (NM_001256117) promoter-TSS (NM_001256117) -328 NM_001256115 77053 Mm.210845 NM_024451 ENSMUSG00000036817 Sun1 4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810 Sad1 and UNC84 domain containing 1 protein-coding common_peak1_127_1237_-0.297705402530028_10.1249428979492_5.42905435557876 chr19 46039080 46040514 + 5.42905435557876 NA promoter-TSS (NM_010697) promoter-TSS (NM_010697) -176 NM_010697 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding common_peak1_86_811_-0.372538086519324_9.47906687392551_5.42754649118541 chr7 36696608 36698299 + 5.42754649118541 NA promoter-TSS (NM_172298) promoter-TSS (NM_172298) -665 NM_172298 243931 Mm.44141 NM_172298 ENSMUSG00000021217 Tshz3 A630038G13Rik|Tsh3|Zfp537|mKIAA1474|teashirt3 teashirt zinc finger family member 3 protein-coding common_peak2_46_425_-0.53157853279982_8.46892035382593_5.42601942815763 chr12 54655664 54657120 + 5.42601942815763 NA exon (NM_134054, exon 1 of 2) exon (NM_134054, exon 1 of 2) 180 NM_134054 104725 Mm.485026 NM_134054 ENSMUSG00000044408 Sptssa 1110002B05Rik|AA407909|AA409588|AU041967|Ssspta serine palmitoyltransferase, small subunit A protein-coding common_peak2_156_1553_-0.264295154002061_10.4696232114067_5.42453300457886 chr11 86483631 86486035 + 5.42453300457886 NA intron (NM_029788, intron 1 of 8) CpG 176 NM_029788 76892 Mm.262707 NM_029788 ENSMUSG00000020521 Rnft1 0610013E23Rik|AV007605 ring finger protein, transmembrane 1 protein-coding common_peak2_129_1259_-0.295681186868027_10.1513674249533_5.42258709225342 chr6 87540288 87543257 + 5.42258709225342 NA Intergenic Intergenic -8513 NM_001286610 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding unique_peak2_42_164_0.679404956008135_7.70602469224988_5.42176277566815 chr2 32637310 32638636 + 5.42176277566815 NA Intergenic Intergenic 8473 NM_021515 11636 Mm.29189 NM_021515 ENSMUSG00000026817 Ak1 Ak-1|B430205N08Rik adenylate kinase 1 protein-coding common_peak2_42_164_0.679404956008135_7.70602469224988_5.42176277566815 chr7 46710139 46710736 + 5.42176277566815 NA intron (NM_030233, intron 1 of 11) CpG 214 NM_030233 78935 Mm.289866 NM_030233 ENSMUSG00000006763 Saal1 5031425D22Rik|SPACIA1 serum amyloid A-like 1 protein-coding common_peak2_133_1301_-0.289357721829555_10.2018348722509_5.42121931271992 chr4 152177187 152180542 + 5.42121931271992 NA intron (NM_133348, intron 1 of 8) intron (NM_133348, intron 1 of 8) 764 NM_133348 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak1_57_527_-0.469118493659529_8.80983487252869_5.42092555083638 chr13 17694145 17694831 + 5.42092555083638 NA promoter-TSS (NM_025479) promoter-TSS (NM_025479) 277 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak1_29_92_0.869497621489672_6.97390762185287_5.42074728395146 chr10 20148792 20149623 + 5.42074728395146 NA intron (NM_001198635, intron 1 of 17) CpG 287 NM_001198635 17761 Mm.20928 NM_008635 ENSMUSG00000019996 Map7 E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste microtubule-associated protein 7 protein-coding common_peak1_62_575_-0.44831584149053_8.94576708069705_5.41972783829654 chr17 87360909 87361894 + 5.41972783829654 NA intron (NM_028639, intron 16 of 19) intron (NM_028639, intron 16 of 19) 66340 NM_029298 75467 Mm.50108 NM_029298 ENSMUSG00000036557 Stpg4 1700011E24Rik|GSE sperm tail PG rich repeat containing 4 protein-coding common_peak2_351_3900_-0.163381295585188_11.847937635232_5.41813936116152 chr10 20311020 20314210 + 5.41813936116152 NA intron (NM_153787, intron 1 of 12) CpG 146 NM_001025393 72567 Mm.294783 NM_153787 ENSMUSG00000037608 Bclaf1 2610102K23Rik|2700025J07Rik|2810454G14Rik|5730534O06Rik|AI450190|AW556225|Btf|mKIAA0164 BCL2-associated transcription factor 1 protein-coding common_peak2_171_1720_-0.250079589413541_10.6239915873334_5.41750277487954 chr18 73833432 73837507 + 5.41750277487954 NA Intergenic Intergenic -20077 NM_145494 107029 Mm.36817 NM_145494 ENSMUSG00000024556 Me2 AW120568|D030040L20Rik|NAD-ME malic enzyme 2, NAD(+)-dependent, mitochondrial protein-coding common_peak1_73_370_0.471120585776964_8.77083566950929_5.41742495942658 chr8 104630238 104631469 + 5.41742495942658 NA exon (NM_019662, exon 2 of 5) exon (NM_019662, exon 2 of 5) 468 NM_019662 56437 Mm.29467 NM_019662 ENSMUSG00000031880 Rrad REM3|Rad Ras-related associated with diabetes protein-coding common_peak2_287_3093_-0.184122874830944_11.5031960440336_5.41580681462622 chr4 140699121 140703455 + 5.41580681462622 NA promoter-TSS (NM_173867) promoter-TSS (NM_173867) -185 NM_173867 108911 Mm.253 NM_173867 ENSMUSG00000040945 Rcc2 2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470 regulator of chromosome condensation 2 protein-coding common_peak2_140_1377_-0.281094569124988_10.2878128881418_5.41549308706681 chr11 107011523 107013337 + 5.41549308706681 NA Intergenic Intergenic -12905 NM_010655 16647 Mm.12508 NM_010655 ENSMUSG00000018362 Kpna2 2410044B12Rik|IPOA1|PTAC58|Rch1 karyopherin (importin) alpha 2 protein-coding common_peak1_92_872_-0.359021122741851_9.59032728225852_5.41490058918072 chr13 43245441 43247220 + 5.41490058918072 NA intron (NM_001033399, intron 1 of 1) MTD|LTR|ERVL-MaLR 57842 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding unique_peak2_21_202_-0.805538174491225_7.26256682993956_5.41484784030099 chr13 44394235 44395532 + 5.41484784030099 NA Intergenic MTD|LTR|ERVL-MaLR -44844 NR_045489 69491 Mm.392410 NR_045489 ENSMUSG00000098144 1700029N11Rik - RIKEN cDNA 1700029N11 gene ncRNA common_peak2_21_202_-0.805538174491225_7.26256682993956_5.41484784030099 chr15 81663729 81664590 + 5.41484784030099 NA intron (NM_001289712, intron 1 of 16) intron (NM_001289712, intron 1 of 16) 270 NR_110362 214669 Mm.280768 NM_145993 ENSMUSG00000022394 L3mbtl2 4732493N06Rik|M4mbt l(3)mbt-like 2 (Drosophila) protein-coding unique_peak2_21_202_-0.805538174491225_7.26256682993956_5.41484784030099-2 chr14 105482704 105483844 + 5.41484784030099 NA Intergenic Intergenic -15514 NR_045921 74864 Mm.159344 NR_045921 ENSMUSG00000022116 4930449E01Rik - RIKEN cDNA 4930449E01 gene ncRNA common_peak1_145_1432_-0.27589155669016_10.3468771159171_5.41398908416764 chr9 44232894 44234094 + 5.41398908416764 NA intron (NM_007619, intron 1 of 15) intron (NM_007619, intron 1 of 15) 552 NM_007619 12402 Mm.266871 NM_007619 ENSMUSG00000034342 Cbl 4732447J05Rik|Cbl-2|c-Cbl|cbl Casitas B-lineage lymphoma protein-coding common_peak1_68_633_-0.425743709892613_9.0954671751931_5.41302978729036 chr13 119487866 119489157 + 5.41302978729036 NA promoter-TSS (NR_027974) promoter-TSS (NR_027974) -127 NR_027974 67304 Mm.474382 NM_026084 ENSMUSG00000074635 3110070M22Rik - RIKEN cDNA 3110070M22 gene ncRNA common_peak2_208_2144_-0.223016315862166_10.9552537744558_5.41224503303912 chr2 129197039 129200106 + 5.41224503303912 NA promoter-TSS (NM_015747) promoter-TSS (NM_015747) -201 NM_015747 20515 Mm.272675 NM_015747 ENSMUSG00000027397 Slc20a1 AI607883|Glvr-1|Glvr1 solute carrier family 20, member 1 protein-coding common_peak2_61_286_0.528387589244975_8.42910072129818_5.41222564942941 chr10 39420325 39421985 + 5.41222564942941 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 51356 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_90_498_0.409449037382787_9.16762052402865_5.4103298717661 chr5 108460483 108462240 + 5.4103298717661 NA promoter-TSS (NM_172716) promoter-TSS (NM_172716) 29 NM_172716 69587 Mm.261218 NM_172716 ENSMUSG00000033623 Pcgf3 2310035N15Rik|AI662857|D630042K08Rik|DONG1|E430039C14|RNF3A|Rnf3 polycomb group ring finger 3 protein-coding common_peak1_371_3321_0.166204985297925_11.7809388506113_5.40675222664145 chr3 104863531 104865666 + 5.40675222664145 NA promoter-TSS (NM_001253702) promoter-TSS (NM_001253702) 92 NM_153091 229681 Mm.206379 NM_153091 ENSMUSG00000045576 St7l St7r suppression of tumorigenicity 7-like protein-coding common_peak1_103_601_0.375026190253942_9.42113277188667_5.40638365633931 chr5 32853452 32854331 + 5.40638365633931 NA intron (NM_194340, intron 1 of 10) intron (NM_194340, intron 1 of 10) 339 NM_194340 215476 Mm.248721 NM_194340 ENSMUSG00000054280 Prr14l 6030436E02Rik|C330019G07Rik|Prl14l proline rich 14-like protein-coding unique_peak1_17_37_1.25675784842908_5.87630643765813_5.40622381742475 chr14 55392757 55393252 + 5.40622381742475 NA Intergenic Intergenic -85754 NM_001037938 28200 Mm.27427 NM_030686 ENSMUSG00000022210 Dhrs4 AI043103|AI790593|CR|D14Ucla2|NDRD|PHCR|PSCD|RRD|mouNRDR dehydrogenase/reductase (SDR family) member 4 protein-coding common_peak1_206_2120_-0.223799069130477_10.9386293709653_5.40465784550823 chr5 112324866 112326829 + 5.40465784550823 NA promoter-TSS (NM_018783) promoter-TSS (NM_018783) -522 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding common_peak1_53_489_-0.48781806097662_8.69272890851426_5.40378487011268 chr11 4703725 4704560 + 5.40378487011268 NA promoter-TSS (NM_026015) promoter-TSS (NM_026015) 202 NM_197979 66152 Mm.269736 NM_197979 ENSMUSG00000059534 Uqcr10 1110020P15Rik|AA960494|Ucrc ubiquinol-cytochrome c reductase, complex III subunit X protein-coding common_peak2_53_489_-0.48781806097662_8.69272890851426_5.40378487011268 chr3 51635980 51637557 + 5.40378487011268 NA Intergenic Intergenic -24411 NM_174995 211666 Mm.24679 NM_174995 ENSMUSG00000074604 Mgst2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding common_peak1_43_397_-0.550214566663342_8.36151733721198_5.40259739045257 chr14 65070306 65070934 + 5.40259739045257 NA intron (NM_018788, intron 3 of 6) B1F1|SINE|Alu 27486 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak1_189_1924_-0.235560629008058_10.7928624159656_5.40255820529351 chr10 81137556 81139011 + 5.40255820529351 NA intron (NM_010731, intron 1 of 2) intron (NM_010731, intron 1 of 2) 2012 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak2_52_226_0.589193278152197_8.12114512636701_5.40119362861774 chr19 38930434 38931682 + 5.40119362861774 NA promoter-TSS (NM_008234) promoter-TSS (NM_008234) 68 NM_008234 15201 Mm.57223 NM_008234 ENSMUSG00000025001 Hells AI323785|E130115I21Rik|LSH|Lysh|PASG|YFK8 helicase, lymphoid specific protein-coding common_peak2_52_226_0.589193278152197_8.12114512636701_5.40119362861774-2 chr3 152713518 152714666 + 5.40119362861774 NA promoter-TSS (NM_178016) promoter-TSS (NM_178016) -8 NM_178016 329777 Mm.331447 NM_025662 ENSMUSG00000039047 Pigk 3000001O05Rik phosphatidylinositol glycan anchor biosynthesis, class K protein-coding common_peak2_340_2965_0.175760735407527_11.6221832501584_5.40104872959669 chr18 12639715 12644676 + 5.40104872959669 NA Intergenic Intergenic -1338 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding common_peak1_133_853_0.319063751715589_9.89762413547829_5.39979730834377 chr5 138263208 138264483 + 5.39979730834377 NA promoter-TSS (NR_045821) promoter-TSS (NR_045821) -200 NR_045821 69004 Mm.439868 NR_045821 ENSMUSG00000085227 6330418K02Rik - RIKEN cDNA 6330418K02 gene ncRNA common_peak2_64_307_0.510127979637994_8.5218505305139_5.39964712417066 chr5 129941874 129942973 + 5.39964712417066 NA intron (NM_001001327, intron 1 of 1) CpG 314 NM_001286382 69568 Mm.288718 NM_027121 ENSMUSG00000066735 Vkorc1l1 2310024K08Rik vitamin K epoxide reductase complex, subunit 1-like 1 protein-coding common_peak2_63_584_-0.442814928972886_8.97088534998432_5.3994978445243 chr17 73008385 73009981 + 5.3994978445243 NA Intergenic Intergenic 90878 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_322_2763_0.18155454560306_11.5233191731898_5.3993106071992 chr18 79070307 79076496 + 5.3993106071992 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 35990 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak2_278_2280_0.199500505728736_11.2552009841765_5.39895439365944 chr12 25154296 25157103 + 5.39895439365944 NA Intergenic Intergenic 26525 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_101_963_-0.338606247916148_9.74358621227189_5.39837869670449 chr12 110445915 110447731 + 5.39837869670449 NA promoter-TSS (NM_001135001) promoter-TSS (NM_001135001) -356 NM_001135001 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_28_87_0.889231695875271_6.90404746657493_5.39828123931487 chr12 112688484 112689040 + 5.39828123931487 NA Intergenic Intergenic 9922 NM_001100460 382639 Mm.11350 NM_001100460 ENSMUSG00000037638 Zbtb42 EG382639|Gm5188|simiRP58 zinc finger and BTB domain containing 42 protein-coding common_peak1_69_642_-0.420616901618057_9.11836647651892_5.39798162673646 chr7 80775410 80776164 + 5.39798162673646 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 27544 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_15_152_-0.961134579567484_6.77682055290891_5.39735721850866 chr7 19149397 19149814 + 5.39735721850866 NA promoter-TSS (NM_026111) promoter-TSS (NM_026111) -233 NM_026943 107686 Mm.29135 NM_026943 ENSMUSG00000040824 Snrpd2 1810009A06Rik|SMD2 small nuclear ribonucleoprotein D2 protein-coding common_peak1_22_211_-0.789459650469689_7.33319062932835_5.39565540723019 chr1 58720878 58721388 + 5.39565540723019 NA intron (NM_207653, intron 1 of 9) intron (NM_207653, intron 1 of 9) 7847 NM_207653 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak1_22_211_-0.789459650469689_7.33319062932835_5.39565540723019-2 chr7 126396404 126396831 + 5.39565540723019 NA exon (NM_010900, exon 1 of 8) exon (NM_010900, exon 1 of 8) 120 NM_010900 18020 Mm.1389 NM_010900 ENSMUSG00000030722 Nfatc2ip D7Ertd304e|NIP45 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein protein-coding common_peak2_84_791_-0.377714772227119_9.44049923396605_5.39302418876251 chr15 89195748 89197299 + 5.39302418876251 NA promoter-TSS (NM_027081) promoter-TSS (NM_027081) -49 NM_027081 69440 Mm.482128 NM_027081 ENSMUSG00000015377 Dennd6b 1700027J05Rik|AI414881|Fam116b DENN/MADD domain containing 6B protein-coding common_peak2_200_1477_0.245247662156855_10.6520543852246_5.39290661976851 chr19 36925202 36927003 + 5.39290661976851 NA promoter-TSS (NM_001080706) promoter-TSS (NM_001080706) 23 NM_001080706 107182 Mm.295062 NM_001080706 ENSMUSG00000040565 Btaf1 AI414500|AI447930|E430027O22Rik|TAF170 B-TFIID TATA-box binding protein associated factor 1 protein-coding unique_peak2_8_94_-1.29178255764464_5.92396432950863_5.3912890827562 chr11 116623803 116624344 + 5.3912890827562 NA intron (NM_172572, intron 1 of 18) CpG 179 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding unique_peak2_8_94_-1.29178255764464_5.92396432950863_5.3912890827562-2 chr18 20855121 20855994 + 5.3912890827562 NA intron (NM_177038, intron 11 of 28) intron (NM_177038, intron 11 of 28) 40521 NM_177038 75964 Mm.273769 NM_029491 ENSMUSG00000033382 Trappc8 5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012 trafficking protein particle complex 8 protein-coding unique_peak2_49_452_-0.510739736723494_8.56799737168449_5.39066496391314 chr9 78085458 78087447 + 5.39066496391314 NA intron (NM_001081490, intron 9 of 12) intron (NM_001081490, intron 9 of 12) 22204 NM_023605 71538 Mm.28584 NM_023605 ENSMUSG00000001366 Fbxo9 9030401P18Rik|AA986398 f-box protein 9 protein-coding common_peak1_181_1293_0.261335451913896_10.4682896279495_5.39036893109755 chr4 143411798 143413372 + 5.39036893109755 NA 5' UTR (NM_172877, exon 1 of 5) 5' UTR (NM_172877, exon 1 of 5) 159 NM_172877 242736 Mm.275953 NM_172877 ENSMUSG00000046862 Pramef8 4732496O08Rik|AU023234 PRAME family member 8 protein-coding common_peak1_39_147_0.708293173188182_7.56359995222304_5.39027016849868 chr18 35865617 35866367 + 5.39027016849868 NA Intergenic Intergenic 36174 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_78_407_0.449673749141821_8.8972622165424_5.38995339984448 chr5 21244409 21245947 + 5.38995339984448 NA intron (NM_175437, intron 13 of 30) intron (NM_175437, intron 13 of 30) 58911 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak2_116_708_0.347436148521629_9.64335989150033_5.38950591058381 chr19 9134143 9136225 + 5.38950591058381 NA intron (NM_025610, intron 1 of 6) intron (NM_025610, intron 1 of 6) 382 NM_025610 66514 Mm.272847 NM_025610 ENSMUSG00000024654 Asrgl1 2410004D18Rik|ALP|ALP1|AU040643|AW060375 asparaginase like 1 protein-coding common_peak1_295_3191_-0.180624351451867_11.5499327604964_5.3877947466591 chr2 127503963 127506465 + 5.3877947466591 NA intron (NM_019789, intron 2 of 8) intron (NM_019789, intron 2 of 8) 16178 NM_001291005 56461 Mm.315292 NM_019789 ENSMUSG00000079056 Kcnip3 4933407H12Rik|AI413860|Csen|DREAM|KChIP3|R74849 Kv channel interacting protein 3, calsenilin protein-coding common_peak2_202_2073_-0.226000755035187_10.9051998012956_5.38764427547019 chr1 53844216 53847938 + 5.38764427547019 NA intron (NM_001001883, intron 21 of 28) intron (NM_001001883, intron 21 of 28) -3347 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA common_peak2_127_1236_-0.296539588292134_10.1243599908303_5.38675632132849 chr11 83472204 83474219 + 5.38675632132849 NA intron (NM_027427, intron 1 of 15) CpG 103 NM_027427 70439 Mm.181050 NM_027427 ENSMUSG00000020680 Taf15 2610111C21Rik|68kDa|TAFII68|Taf2n TATA-box binding protein associated factor 15 protein-coding common_peak2_57_259_0.552907812670471_8.29882171936369_5.38209850037919 chr2 174332663 174334713 + 5.38209850037919 NA intron (NM_001310083, intron 2 of 12) intron (NM_001310083, intron 2 of 12) 3599 NM_001077510 14683 Mm.125770 NM_010309 ENSMUSG00000027523 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus protein-coding common_peak1_57_259_0.552907812670471_8.29882171936369_5.38209850037919 chr1 54661097 54661853 + 5.38209850037919 NA intron (NM_001081433, intron 20 of 27) MIRb|SINE|MIR -103791 NM_001163314 241062 Mm.103539 NM_175508 ENSMUSG00000073678 Pgap1 5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto post-GPI attachment to proteins 1 protein-coding common_peak2_27_82_0.911525318671001_6.83080209068243_5.38102642300241 chr7 142362459 142363278 + 5.38102642300241 NA intron (NM_177265, intron 2 of 3) intron (NM_177265, intron 2 of 3) 9391 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding unique_peak1_18_41_1.20804678061813_5.99634081308783_5.38085182325766-2 chr7 16250921 16251346 + 5.38085182325766 NA intron (NM_001173550, intron 1 of 1) B1F|SINE|Alu -6979 NM_176912 319430 Mm.239570 NM_176912 ENSMUSG00000074361 C5ar2 C5L2|E030029A11Rik|Gpr77 complement component 5a receptor 2 protein-coding common_peak1_18_41_1.20804678061813_5.99634081308783_5.38085182325766-2 chr6 129646647 129647072 + 5.38085182325766 NA Intergenic Lx7|LINE|L1 -3571 NM_021378 58179 Mm.358684 NM_021378 ENSMUSG00000033027 Klrc3 Klrc2|Nkg2e killer cell lectin-like receptor subfamily C, member 3 protein-coding common_peak1_18_41_1.20804678061813_5.99634081308783_5.38085182325766 chr13 92093908 92094342 + 5.38085182325766 NA Intergenic Intergenic -106083 NM_009027 19418 Mm.248630 NM_009027 ENSMUSG00000021708 Rasgrf2 6330417G04Rik|AW048350|Grf2|Ras-GRF2 RAS protein-specific guanine nucleotide-releasing factor 2 protein-coding unique_peak1_18_41_1.20804678061813_5.99634081308783_5.38085182325766 chr6 148327956 148328424 + 5.38085182325766 NA intron (NM_198967, intron 7 of 19) intron (NM_198967, intron 7 of 19) -26466 NR_003634 66184 Mm.391542 NM_025405 ENSMUSG00000063171 Rps4l 1110033J19Rik|AA407494|Rps4y2 ribosomal protein S4-like pseudo common_peak2_271_2206_0.202114591439981_11.2089282099996_5.37985927552491 chr2 155978084 155980992 + 5.37985927552491 NA intron (NM_001129999, intron 19 of 32) intron (NM_001129999, intron 19 of 32) 22980 NM_177217 16328 Mm.288729 NM_008383 ENSMUSG00000038241 Cep250 AW490617|B230210E21Rik|Cep2|Inmp centrosomal protein 250 protein-coding common_peak2_197_1448_0.24722489544359_10.6244543272787_5.37843471255474 chr16 17011342 17016893 + 5.37843471255474 NA intron (NM_011949, intron 1 of 8) intron (NM_011949, intron 1 of 8) 30735 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak2_178_1265_0.263482895994427_10.4378031374256_5.37815573373209 chr11 70220411 70222848 + 5.37815573373209 NA promoter-TSS (NM_172371) promoter-TSS (NM_172371) -635 NM_172371 69309 Mm.93266 NM_172371 ENSMUSG00000044367 Slc16a13 1700007D07Rik solute carrier family 16 (monocarboxylic acid transporters), member 13 protein-coding common_peak2_42_387_-0.554185671933176_8.32282000622054_5.37791377097709 chr11 119418420 119420464 + 5.37791377097709 NA Intergenic Intergenic 28970 NR_035453 100316690 NR_035453 ENSMUSG00000088015 Mir1932 mir-1932|mmu-mir-1932 microRNA 1932 ncRNA common_peak2_86_810_-0.37076027355142_9.47817796744156_5.37537134848817 chr10 105840848 105842160 + 5.37537134848817 NA promoter-TSS (NM_207522) promoter-TSS (NM_207522) 25 NM_025602 52713 Mm.339224 NM_025602 ENSMUSG00000019897 Ccdc59 2300004H16Rik|D10Ertd718e coiled-coil domain containing 59 protein-coding common_peak2_136_1333_-0.285205394649726_10.2389402538597_5.37510825933576 chr7 45134655 45137600 + 5.37510825933576 NA intron (NR_102725, intron 1 of 7) intron (NR_102725, intron 1 of 7) 305 NM_013520 14256 Mm.1658 NM_013520 ENSMUSG00000110206 Flt3l Flt3lg|Ly72L FMS-like tyrosine kinase 3 ligand protein-coding common_peak1_145_1431_-0.27488443969227_10.3463735574181_5.37472246669479 chr3 95140884 95142660 + 5.37472246669479 NA intron (NM_027206, intron 1 of 1) intron (NM_027206, intron 1 of 1) 588 NM_027206 69769 Mm.34368 NM_027206 ENSMUSG00000013707 Tnfaip8l2 1810019A08Rik|AW610835|TIPE2 tumor necrosis factor, alpha-induced protein 8-like 2 protein-coding common_peak1_293_3166_-0.181278087777867_11.5382621081393_5.37423655031571 chr16 91459676 91463298 + 5.37423655031571 NA Intergenic Charlie7|DNA|hAT-Charlie -3617 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak2_204_1517_0.241592776528281_10.6887524636796_5.37402795974284 chr3 93595568 93598482 + 5.37402795974284 NA Intergenic Intergenic 41908 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak1_108_642_0.363067308201689_9.51020858142879_5.37362003032552 chr18 23751770 23753556 + 5.37362003032552 NA promoter-TSS (NR_126066) promoter-TSS (NR_126066) 330 NM_001162942 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak2_83_445_0.429799366250906_9.01579958304576_5.37202600065577 chr13 77708059 77709440 + 5.37202600065577 NA promoter-TSS (NR_028109) promoter-TSS (NR_028109) 59 NM_001163419 68675 Mm.343005 NM_138312 ENSMUSG00000064138 Fam172a 1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|AF064782|pEN87 family with sequence similarity 172, member A protein-coding unique_peak1_19_45_1.16757227157376_6.10734809184389_5.37153274000273 chr5 21217875 21218389 + 5.37153274000273 NA intron (NM_175437, intron 6 of 30) Tigger17a|DNA|TcMar-Tigger 31865 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_19_45_1.16757227157376_6.10734809184389_5.37153274000273-2 chrX 102644575 102645037 + 5.37153274000273 NA promoter-TSS (NM_008832) promoter-TSS (NM_008832) -560 NM_173021 18679 Mm.212889 NM_008832 ENSMUSG00000034055 Phka1 5330411D17|9830108K24Rik|Phka phosphorylase kinase alpha 1 protein-coding common_peak1_19_45_1.16757227157376_6.10734809184389_5.37153274000273 chr2 93462656 93463009 + 5.37153274000273 NA promoter-TSS (NM_001271432) promoter-TSS (NM_001271432) 118 NM_001271431 12521 Mm.4261 NM_007656 ENSMUSG00000027215 Cd82 AA682076|AL023070|C33|IA4|Kai1|Tspan27 CD82 antigen protein-coding common_peak1_265_2142_0.205096489172169_11.1679643792626_5.37069653569077 chr15 27924621 27927451 + 5.37069653569077 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 99812 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak1_32_108_0.809135622883954_7.1727521362189_5.37045212709636 chr10 118086508 118087032 + 5.37045212709636 NA Intergenic Intergenic -55017 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding unique_peak2_32_108_0.809135622883954_7.1727521362189_5.37045212709636 chr7 99380700 99381367 + 5.37045212709636 NA promoter-TSS (NM_201352) promoter-TSS (NM_201352) -516 NM_201352 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding common_peak2_32_108_0.809135622883954_7.1727521362189_5.37045212709636 chr7 133776256 133776925 + 5.37045212709636 NA promoter-TSS (NM_025850) promoter-TSS (NM_025850) 213 NM_001286032 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding unique_peak2_13_135_-1.02751040241877_6.57370764004095_5.37018301935133-2 chr19 46394528 46395229 + 5.37018301935133 NA intron (NM_016860, intron 1 of 10) intron (NM_016860, intron 1 of 10) 857 NM_016860 54130 Mm.3118 NM_016860 ENSMUSG00000025228 Actr1a Arp1|alpha-Arp1 ARP1 actin-related protein 1A, centractin alpha protein-coding unique_peak2_13_135_-1.02751040241877_6.57370764004095_5.37018301935133 chr17 3395195 3396194 + 5.37018301935133 NA intron (NM_001122998, intron 1 of 26) intron (NM_001122998, intron 1 of 26) -1513 NM_011878 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak1_26_77_0.936805347977346_6.75380489285092_5.36984160012101-2 chr7 99960056 99960715 + 5.36984160012101 NA intron (NM_175388, intron 1 of 5) MTA_Mm|LTR|ERVL-MaLR 20073 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding common_peak1_26_77_0.936805347977346_6.75380489285092_5.36984160012101 chr4 142083934 142084481 + 5.36984160012101 NA promoter-TSS (NM_145402) promoter-TSS (NM_145402) -91 NR_027137 100038693 Mm.402714 NR_027137 ENSMUSG00000073728 Tmem51os1 ENSMUSG00000073728|Gm10565|Tmem51as1 Tmem51 opposite strand 1 ncRNA common_peak2_161_1106_0.280514887397683_10.2526969504804_5.36973635178335 chr11 98357498 98359239 + 5.36973635178335 NA promoter-TSS (NM_021547) promoter-TSS (NM_021547) 0 NM_021547 59045 Mm.265546 NM_021547 ENSMUSG00000018167 Stard3 Mln64|es64 START domain containing 3 protein-coding common_peak2_67_623_-0.428641335515366_9.07108155110457_5.36951690673668 chr10 80406106 80407623 + 5.36951690673668 NA promoter-TSS (NM_025650) promoter-TSS (NM_025650) -43 NM_025650 66594 Mm.379119 NM_025650 ENSMUSG00000020163 Uqcr11 0710008D09Rik|AL022707|Uqcr ubiquinol-cytochrome c reductase, complex III subunit XI protein-coding common_peak1_29_271_-0.678806408652636_7.74805963692402_5.36883458943351 chr11 54860042 54860626 + 5.36883458943351 NA intron (NM_029327, intron 1 of 4) intron (NM_029327, intron 1 of 4) 257 NM_029327 75530 Mm.83578 NM_029327 ENSMUSG00000020268 Lyrm7 1700024C24Rik|9330147L21Rik LYR motif containing 7 protein-coding common_peak1_29_271_-0.678806408652636_7.74805963692402_5.36883458943351-2 chr6 87671742 87672227 + 5.36883458943351 NA 5' UTR (NM_001170489, exon 1 of 11) 5' UTR (NM_001170489, exon 1 of 11) 184 NM_024251 72103 Mm.31770 NM_024251 ENSMUSG00000030051 Aplf 2010301N04Rik|AI452191 aprataxin and PNKP like factor protein-coding common_peak1_52_479_-0.491148830165406_8.66131618052582_5.36822164749859 chr5 129908272 129909104 + 5.36822164749859 NA exon (NM_026916, exon 1 of 3) exon (NM_026916, exon 1 of 3) 148 NM_026916 69034 Mm.211372 NM_026916 ENSMUSG00000095789 Nupr1l 1810010E01Rik|4930579G22Rik|Nupr2 nuclear protein transcriptional regulator 1 like protein-coding common_peak2_159_1087_0.283508319939505_10.2292170012201_5.36808202055819 chr9 42106976 42110405 + 5.36808202055819 NA intron (NM_011436, intron 1 of 47) intron (NM_011436, intron 1 of 47) 15599 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding unique_peak2_16_160_-0.927380617140445_6.86722656954439_5.36749417469163 chr10 27968515 27969366 + 5.36749417469163 NA Intergenic B4|SINE|B4 -105880 NM_008983 19272 Mm.332303 NM_008983 ENSMUSG00000019889 Ptprk AI853699|PTPk|RPTPkappa protein tyrosine phosphatase, receptor type, K protein-coding common_peak1_33_306_-0.631946273209651_7.94612170876535_5.36562161691215 chr10 34297229 34297952 + 5.36562161691215 NA exon (NM_030203, exon 1 of 1) exon (NM_030203, exon 1 of 1) 169 NM_030203 72480 Mm.21485 NM_030203 ENSMUSG00000039485 Tspyl4 2610102M01Rik|B230210I21Rik|D10Bwg0791e TSPY-like 4 protein-coding common_peak1_35_124_0.765513388396936_7.34854097886056_5.36460281278653 chr11 95823982 95824846 + 5.36460281278653 NA promoter-TSS (NM_153104) promoter-TSS (NM_153104) -86 NM_153104 237928 Mm.133075 NM_153104 ENSMUSG00000050860 Phospho1 D11Moh36|Phospo1 phosphatase, orphan 1 protein-coding common_peak1_35_124_0.765513388396936_7.34854097886056_5.36460281278653-2 chr12 79442073 79442782 + 5.36460281278653 NA intron (NM_009014, intron 7 of 10) PB1D7|SINE|Alu 145076 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_38_141_0.723196330103178_7.51134528455627_5.36195849014441 chr16 36828014 36828958 + 5.36195849014441 NA promoter-TSS (NM_177128) promoter-TSS (NM_177128) 86 NM_177128 320299 Mm.222934 NM_177128 ENSMUSG00000022837 Iqcb1 6820449I09Rik|AV128382|NPHP5 IQ calmodulin-binding motif containing 1 protein-coding common_peak2_41_159_0.682158860097492_7.66300752493611_5.36163811424976 chr19 3922913 3924285 + 5.36163811424976 NA intron (NM_026316, intron 2 of 9) intron (NM_026316, intron 2 of 9) 6117 NM_026316 67689 Mm.109341 NM_026316 ENSMUSG00000024885 Aldh3b1 1700001N19Rik|ALDH4|ALDH7 aldehyde dehydrogenase 3 family, member B1 protein-coding common_peak2_41_159_0.682158860097492_7.66300752493611_5.36163811424976-2 chr3 135825546 135826777 + 5.36163811424976 NA intron (NM_001135150, intron 1 of 8) intron (NM_001135150, intron 1 of 8) 371 NM_001135150 67547 Mm.30239 NM_026228 ENSMUSG00000053897 Slc39a8 4933419D20Rik|AA986696|BIGM103|ZIP-8|Zip8 solute carrier family 39 (metal ion transporter), member 8 protein-coding unique_peak2_6_78_-1.47044062053189_5.56856043791116_5.36009626831976-2 chr9 44112943 44113591 + 5.36009626831976 NA promoter-TSS (NM_153762) promoter-TSS (NM_153762) -216 NM_153762 213211 Mm.392032 NM_153762 ENSMUSG00000053128 Rnf26 8030450I18Rik ring finger protein 26 protein-coding unique_peak2_6_78_-1.47044062053189_5.56856043791116_5.36009626831976 chr16 35695562 35696307 + 5.36009626831976 NA 3' UTR (NM_153550, exon 9 of 9) 3' UTR (NM_153550, exon 9 of 9) 73422 NM_153550 224132 Mm.24094 NM_153550 ENSMUSG00000022848 Dirc2 RCC4 disrupted in renal carcinoma 2 (human) protein-coding unique_peak2_7_86_-1.37330254390992_5.75629222389377_5.36002993601025-2 chr5 86783265 86783930 + 5.36002993601025 NA Intergenic RMER10B|LTR|ERVL -20893 NM_177680 231386 Mm.196325 NM_177680 ENSMUSG00000035851 Ythdc1 A730098D12Rik|C80342|mKIAA1966 YTH domain containing 1 protein-coding unique_peak2_7_86_-1.37330254390992_5.75629222389377_5.36002993601025 chr19 33761454 33762068 + 5.36002993601025 NA Intergenic Intergenic -171450 NM_001013770 381236 Mm.491242 NM_001013770 ENSMUSG00000024766 Lipo3 AI747699|Lipo1 lipase, member O3 protein-coding common_peak1_215_1627_0.233159516132416_10.7854647423325_5.35774722535843 chr1 159231349 159233186 + 5.35774722535843 NA promoter-TSS (NM_011931) promoter-TSS (NM_011931) -59 NM_011931 26374 Mm.328135 NM_011931 ENSMUSG00000040782 Rfwd2 AI316802|C80879|Cop1 ring finger and WD repeat domain 2 protein-coding common_peak2_434_4069_0.150090338390564_12.0658582483489_5.35724417301005 chr17 72916973 72920199 + 5.35724417301005 NA intron (NM_029999, intron 1 of 2) intron (NM_029999, intron 1 of 2) 281 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_544_5440_0.130191709348106_12.4747519677339_5.35697555645287 chr10 127134320 127139812 + 5.35697555645287 NA Intergenic Lx8|LINE|L1 -15906 NM_001171026 216440 Mm.295246 NM_177614 ENSMUSG00000040462 Os9 4632413K17Rik|AU022351 amplified in osteosarcoma protein-coding common_peak2_127_802_0.326834019166922_9.81267318710077_5.35644491379552 chr7 121033853 121035882 + 5.35644491379552 NA exon (NM_021554, exon 1 of 5) exon (NM_021554, exon 1 of 5) 422 NM_021554 59052 Mm.29122 NM_021554 ENSMUSG00000030876 Mettl9 0610012D09Rik|AA517660|Drev|MNCb-5680 methyltransferase like 9 protein-coding common_peak2_72_364_0.470566372618249_8.7470358400765_5.35644161432405 chr13 77134719 77136049 + 5.35644161432405 NA promoter-TSS (NM_134071) promoter-TSS (NM_134071) 84 NM_134071 105377 Mm.209730 NM_134071 ENSMUSG00000021597 Slf1 2700017A04Rik|AW545819|Ankrd32|Brctd1|Brctx|C730024G01Rik SMC5-SMC6 complex localization factor 1 protein-coding common_peak1_57_526_-0.466383525938289_8.80846738866807_5.35634385666638 chr14 77874184 77875142 + 5.35634385666638 NA intron (NM_025384, intron 1 of 5) intron (NM_025384, intron 1 of 5) 254 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding common_peak1_465_5404_-0.137355030561809_12.3314013873411_5.35595028615384 chr11 69096610 69100627 + 5.35595028615384 NA promoter-TSS (NM_011065) promoter-TSS (NM_011065) -338 NM_011065 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding common_peak1_28_262_-0.690255674779734_7.69379115190243_5.35500072509206 chr6 90745545 90746221 + 5.35500072509206 NA intron (NM_001134384, intron 1 of 13) intron (NM_001134384, intron 1 of 13) -29354 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_84_453_0.425093360561577_9.0390951675717_5.35474006659236 chr8 4492658 4494063 + 5.35474006659236 NA promoter-TSS (NM_026058) promoter-TSS (NM_026058) -45 NM_026058 67260 Mm.35511 NM_026058 ENSMUSG00000008206 Cers4 2900019C14Rik|Lass4|Trh1 ceramide synthase 4 protein-coding common_peak2_68_632_-0.423466369181547_9.09432850483757_5.35410501238528 chr17 56625804 56627789 + 5.35410501238528 NA exon (NM_028782, exon 1 of 18) exon (NM_028782, exon 1 of 18) 107 NM_028782 74142 Mm.329136 NM_028782 ENSMUSG00000041168 Lonp1 1200017E13Rik|LON|Prss15 lon peptidase 1, mitochondrial protein-coding common_peak1_153_1033_0.289313381644488_10.1586771611372_5.35405767082949 chr17 79895251 79896265 + 5.35405767082949 NA intron (NM_019717, intron 1 of 12) CpG 365 NM_178050 56298 Mm.175403 NM_019717 ENSMUSG00000059811 Atl2 2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2 atlastin GTPase 2 protein-coding common_peak2_122_1182_-0.302656577121079_10.0569060697792_5.35386758799117 chr17 5189236 5190778 + 5.35386758799117 NA intron (NM_001085355, intron 4 of 19) CpG 194933 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_158_1573_-0.260343543911089_10.4900480535519_5.3533530043899 chr5 90223153 90224692 + 5.3533530043899 NA promoter-TSS (NM_001163456) promoter-TSS (NM_001163456) 74 NR_028088 231430 Mm.319697 NM_001033310 ENSMUSG00000035505 Cox18 BC038311 cytochrome c oxidase assembly protein 18 protein-coding common_peak1_88_830_-0.365686298006157_9.51586151776727_5.35287624850724 chr8 83572614 83574109 + 5.35287624850724 NA intron (NM_027179, intron 3 of 11) intron (NM_027179, intron 3 of 11) 6603 NM_025843 66916 Mm.29683 NM_025843 ENSMUSG00000033938 Ndufb7 1110002H15Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 protein-coding common_peak1_102_594_0.374802025581433_9.40414687098602_5.35205294470799 chr19 53162339 53163531 + 5.35205294470799 NA intron (NM_013758, intron 1 of 15) PB1D10|SINE|Alu 18938 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak1_79_740_-0.388970882302345_9.33884429115466_5.34998790390141 chr17 26252495 26253668 + 5.34998790390141 NA exon (NM_025881, exon 1 of 9) exon (NM_025881, exon 1 of 9) 171 NR_037905 66978 Mm.440216 NM_025881 ENSMUSG00000024188 Luc7l 1810045C04Rik|2410018D03Rik Luc7-like protein-coding common_peak2_172_1729_-0.247345791031538_10.6328834270083_5.34967859274746 chr3 90508225 90510396 + 5.34967859274746 NA 5' UTR (NM_023215, exon 1 of 5) 5' UTR (NM_023215, exon 1 of 5) 188 NM_001293776 66511 Mm.154136 NM_023215 ENSMUSG00000001017 Chtop 2500003M10Rik|Fop|Srag chromatin target of PRMT1 protein-coding common_peak2_320_3503_-0.171682124092117_11.6889459975551_5.3490004194884 chr19 28009160 28012704 + 5.3490004194884 NA intron (NM_011265, intron 1 of 16) (CA)n|Simple_repeat|Simple_repeat 234 NM_011265 19726 Mm.313321 NM_011265 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) protein-coding common_peak1_17_168_-0.896194074409517_6.95278239907743_5.34788600675539 chr1 54880441 54880912 + 5.34788600675539 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 45711 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding unique_peak1_14_26_1.42715661924788_5.46846581178741_5.34699113727521-4 chr8 40598169 40598603 + 5.34699113727521 NA intron (NM_001040699, intron 3 of 13) intron (NM_001040699, intron 3 of 13) 36406 NM_001040699 54384 Mm.294871 NM_019433 ENSMUSG00000039431 Mtmr7 - myotubularin related protein 7 protein-coding unique_peak1_14_26_1.42715661924788_5.46846581178741_5.34699113727521-3 chr8 25072072 25072480 + 5.34699113727521 NA intron (NM_031257, intron 2 of 11) intron (NM_031257, intron 2 of 11) 29535 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding unique_peak1_14_26_1.42715661924788_5.46846581178741_5.34699113727521 chr1 25016071 25016336 + 5.34699113727521 NA Intergenic MMVL30-int|LTR|ERV1 261751 NM_001204913 100504323 Mm.484176 NM_001204913 Gm20172 - predicted gene, 20172 protein-coding unique_peak1_14_26_1.42715661924788_5.46846581178741_5.34699113727521-2 chr14 24779471 24779873 + 5.34699113727521 NA Intergenic Intergenic 288991 NM_011297 20088 Mm.16775 NM_011297 ENSMUSG00000025290 Rps24 - ribosomal protein S24 protein-coding common_peak2_134_863_0.315425651554447_9.91260032794069_5.34696584400185 chr12 99406090 99408265 + 5.34696584400185 NA intron (NM_183186, intron 1 of 5) intron (NM_183186, intron 1 of 5) 42897 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak1_253_2675_-0.197039395281061_11.2873427030009_5.34587693902766 chr6 91114362 91117135 + 5.34587693902766 NA intron (NM_018815, intron 1 of 39) intron (NM_018815, intron 1 of 39) 1078 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding unique_peak2_55_507_-0.475507625567884_8.75093087398822_5.34474226207139 chr1 39935606 39937521 + 5.34474226207139 NA intron (NM_001252200, intron 2 of 31) intron (NM_001252200, intron 2 of 31) 35650 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding common_peak2_266_2154_0.203680730941011_11.175312519447_5.34440745213594 chr8 85553995 85556478 + 5.34440745213594 NA promoter-TSS (NM_019794) promoter-TSS (NM_019794) 35 NM_019794 56445 Mm.475573 NM_019794 ENSMUSG00000031701 Dnaja2 1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3 DnaJ heat shock protein family (Hsp40) member A2 protein-coding common_peak1_27_253_-0.70211993675424_7.63762471839505_5.34439444800745 chr9 32704198 32704808 + 5.34439444800745 NA intron (NM_011808, intron 1 of 7) Lx5|LINE|L1 8461 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak2_27_253_-0.70211993675424_7.63762471839505_5.34439444800745 chr2 167101374 167102710 + 5.34439444800745 NA 3' UTR (NM_008420, exon 2 of 2) 3' UTR (NM_008420, exon 2 of 2) 36749 NR_028540 100217443 NR_028540 Snord12 MBII-99 small nucleolar RNA, C/D box 12 snoRNA common_peak2_142_934_0.303367791807428_10.0205064506787_5.34387455740378 chr15 59373562 59375192 + 5.34387455740378 NA promoter-TSS (NM_153548) promoter-TSS (NM_153548) 179 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding common_peak2_47_195_0.625677935163243_7.92754881169683_5.342658628947 chr8 20557485 20558265 + 5.342658628947 NA Intergenic CpG -57052 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding common_peak2_307_2598_0.186205244673578_11.436843540809_5.34255425245564 chr11 53349904 53352708 + 5.34255425245564 NA intron (NM_033565, intron 1 of 20) intron (NM_033565, intron 1 of 20) 539 NM_033565 93736 Mm.395281 NM_033565 ENSMUSG00000049470 Aff4 AF5Q31|Alf4|Laf4l|MCEF AF4/FMR2 family, member 4 protein-coding common_peak2_347_3846_-0.16349566125805_11.8277702836676_5.34157853707773 chr11 83645523 83651427 + 5.34157853707773 NA intron (NM_011337, intron 2 of 2) intron (NM_011337, intron 2 of 2) 903 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak1_32_297_-0.641848572801282_7.89824423406152_5.34083333389194 chr11 87127069 87127740 + 5.34083333389194 NA 5' UTR (NM_197987, exon 1 of 24) 5' UTR (NM_197987, exon 1 of 24) 329 NM_197987 68729 Mm.17436 NM_197987 ENSMUSG00000018548 Trim37 1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898 tripartite motif-containing 37 protein-coding common_peak1_32_297_-0.641848572801282_7.89824423406152_5.34083333389194-2 chr5 34266188 34266891 + 5.34083333389194 NA intron (NM_001015039, intron 1 of 12) intron (NM_001015039, intron 1 of 12) 21785 NM_001015039 231125 Mm.113388 NM_001015039 ENSMUSG00000037224 Zfyve28 9630058O20Rik|Gm146|mKIAA1643 zinc finger, FYVE domain containing 28 protein-coding common_peak1_84_790_-0.3758920366203_9.43958786616264_5.34037545172152 chr11 11741311 11742799 + 5.34037545172152 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 51878 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_45_183_0.641511159222852_7.84431753566844_5.33978851127239 chr6 120111925 120113058 + 5.33978851127239 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) 19111 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak1_69_641_-0.418371461412413_9.1172437564161_5.33955427786597 chr6 129751086 129752142 + 5.33955427786597 NA Intergenic Intergenic -11130 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak2_81_430_0.436511517162684_8.96979981767044_5.33825077704009 chr11 11750121 11752351 + 5.33825077704009 NA intron (NM_001025597, intron 4 of 7) intron (NM_001025597, intron 4 of 7) 57726 NM_021891 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding common_peak2_81_430_0.436511517162684_8.96979981767044_5.33825077704009-2 chr2 131491299 131492816 + 5.33825077704009 NA intron (NM_145533, intron 1 of 6) CpG 195 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak1_63_583_-0.440346673382138_8.96965122218895_5.33825077703989 chr17 74527346 74528201 + 5.33825077703989 NA promoter-TSS (NM_007566) promoter-TSS (NM_007566) -522 NM_007566 12211 Mm.442564 NM_007566 ENSMUSG00000024073 Birc6 A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289 baculoviral IAP repeat-containing 6 protein-coding common_peak1_60_555_-0.454421621676534_8.89173026188524_5.33785554470386 chr6 37821004 37821738 + 5.33785554470386 NA Intergenic RMER5|LTR|ERV1 -49440 NM_001272064 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding unique_peak2_4_61_-1.71628670512881_5.09605295782247_5.33766904318756 chr17 68502785 68503318 + 5.33766904318756 NA intron (NM_177278, intron 12 of 20) Lx8|LINE|L1 229254 NM_177278 320858 Mm.137356 NM_177278 ENSMUSG00000041565 L3mbtl4 A730037L19Rik|D930040M24Rik l(3)mbt-like 4 (Drosophila) protein-coding unique_peak1_12_19_1.60688083856721_5.12536851417097_5.33766904318754-3 chr14 122181264 122181583 + 5.33766904318754 NA promoter-TSS (NM_029556) promoter-TSS (NM_029556) -271 NM_029556 69634 Mm.34608 NM_029556 ENSMUSG00000025545 Clybl 0610033J05Rik|2310014M14Rik|AI256068|Clb citrate lyase beta like protein-coding unique_peak1_12_19_1.60688083856721_5.12536851417097_5.33766904318754-4 chr7 31059277 31059684 + 5.33766904318754 NA promoter-TSS (NM_144556) promoter-TSS (NM_144556) -455 NM_144556 243914 Mm.389870 NM_144556 ENSMUSG00000036560 Lgi4 Lgil3|clp leucine-rich repeat LGI family, member 4 protein-coding unique_peak1_12_19_1.60688083856721_5.12536851417097_5.33766904318754-2 chr13 93826206 93826583 + 5.33766904318754 NA intron (NM_009712, intron 4 of 7) C-rich|Low_complexity|Low_complexity 35617 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA unique_peak1_12_19_1.60688083856721_5.12536851417097_5.33766904318754 chr10 39397779 39398122 + 5.33766904318754 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 28151 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak1_12_19_1.60688083856721_5.12536851417097_5.33766904318754-5 chr9 94680527 94680939 + 5.33766904318754 NA intron (NM_177909, intron 1 of 15) intron (NM_177909, intron 1 of 15) 10841 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak1_18_176_-0.867241346686107_7.03398487673994_5.3369039289205-2 chr7 64046618 64046975 + 5.3369039289205 NA Intergenic MTEa|LTR|ERVL-MaLR -107039 NM_001039104 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding unique_peak2_18_176_-0.867241346686107_7.03398487673994_5.3369039289205 chr13 97848200 97849259 + 5.3369039289205 NA Intergenic IAPEz-int|LTR|ERVK 288729 NR_046157 328314 Mm.138047 NR_046157 ENSMUSG00000110235 Gm5086 B230311A21|EG328314 predicted gene 5086 ncRNA common_peak1_18_176_-0.867241346686107_7.03398487673994_5.3369039289205 chr6 70791716 70792191 + 5.3369039289205 NA exon (NM_009075, exon 1 of 9) exon (NM_009075, exon 1 of 9) 222 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding common_peak2_146_1441_-0.272844696176854_10.3574331011524_5.33609860400335 chr9 46148880 46152560 + 5.33609860400335 NA intron (NM_027498, intron 3 of 24) intron (NM_027498, intron 3 of 24) -77910 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding common_peak2_697_7466_0.111399592748432_12.9220128120764_5.33531153768897 chr17 6593541 6603330 + 5.33531153768897 NA Intergenic Intergenic -3236 NM_001166627 100040531 Mm.457987 NM_001166627 ENSMUSG00000095677 Dynlt1f 100040631|Dynlt1e dynein light chain Tctex-type 1F protein-coding common_peak1_143_1408_-0.275933600877901_10.3224890958707_5.33506583912875 chr17 84179662 84181025 + 5.33506583912875 NA Intergenic Intergenic 7604 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_143_1408_-0.275933600877901_10.3224890958707_5.33506583912875-2 chr7 101896023 101897443 + 5.33506583912875 NA intron (NM_001291349, intron 1 of 4) intron (NM_001291349, intron 1 of 4) 402 NM_001291349 75430 Mm.284491 NM_027532 ENSMUSG00000030649 Anapc15 3200002M19Rik|6330414C15Rik|APC15 anaphase prompoting complex C subunit 15 protein-coding common_peak2_390_3545_0.160216225789251_11.8720849337933_5.33352753579315 chr11 51633880 51639080 + 5.33352753579315 NA promoter-TSS (NM_025346) promoter-TSS (NM_025346) -584 NM_025346 66089 Mm.288183 NM_025346 ENSMUSG00000001054 Rmnd5b 0610039K22Rik|Gid2 required for meiotic nuclear division 5 homolog B protein-coding common_peak1_49_208_0.605268371241858_8.00999331770181_5.33330411735535 chr7 78720956 78721736 + 5.33330411735535 NA Intergenic Intergenic -3126 NR_015542 414121 Mm.482537 NR_015542 ENSMUSG00000059146 E430016F16Rik - RIKEN cDNA E430016F16 gene ncRNA unique_peak2_19_184_-0.840247232885535_7.11125784407354_5.33324796695822 chr13 55254767 55255778 + 5.33324796695822 NA intron (NM_008739, intron 5 of 22) B3|SINE|B2 45490 NM_008739 18193 Mm.12964 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak1_86_468_0.419353718150477_9.08312097159061_5.33222208940257 chr13 58384594 58385603 + 5.33222208940257 NA exon (NM_027335, exon 1 of 4) exon (NM_027335, exon 1 of 4) 127 NM_027335 70153 Mm.296610 NM_027335 ENSMUSG00000021550 2210016F16Rik - RIKEN cDNA 2210016F16 gene protein-coding common_peak2_91_507_0.403000739694058_9.19018505661919_5.33180555055934 chr11 57517919 57519244 + 5.33180555055934 NA promoter-TSS (NM_026342) promoter-TSS (NM_026342) 63 NM_001168667 67726 Mm.25632 NM_026342 ENSMUSG00000020523 Fam114a2 1810073G14Rik|9030624B09Rik family with sequence similarity 114, member A2 protein-coding common_peak2_368_3289_0.165840428749391_11.7667920829973_5.33130052221241 chr12 105018504 105023150 + 5.33130052221241 NA Intergenic Intergenic 10314 NR_037229 100526471 NR_037229 ENSMUSG00000106366 Mir3069 mir-3069|mmu-mir-3069 microRNA 3069 ncRNA common_peak1_58_267_0.539437214584053_8.3358077977498_5.33099287080006 chr10 93888937 93889773 + 5.33099287080006 NA intron (NM_019648, intron 2 of 11) CpG 1847 NM_019648 56307 Mm.289329 NM_019648 ENSMUSG00000036112 Metap2 4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2 methionine aminopeptidase 2 protein-coding common_peak2_176_1247_0.26425870233286_10.4175315700287_5.32984987084851 chr11 50101766 50104332 + 5.32984987084851 NA intron (NM_021540, intron 8 of 8) intron (NM_021540, intron 8 of 8) -28311 NM_001290759 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding common_peak1_23_63_1.01377546809209_6.50688773404605_5.32948049624563 chr19 37100386 37100946 + 5.32948049624563 NA intron (NM_001290829, intron 4 of 9) intron (NM_001290829, intron 4 of 9) -73177 NR_045329 319931 Mm.446730 NR_045329 ENSMUSG00000097591 A330032B11Rik - RIKEN cDNA A330032B11 gene ncRNA unique_peak1_23_63_1.01377546809209_6.50688773404605_5.32948049624563 chr7 108990840 108991424 + 5.32948049624563 NA Intergenic Intergenic -19748 NM_021885 22141 Mm.439722 NM_021885 ENSMUSG00000031028 Tub rd5|tub tubby candidate gene protein-coding common_peak1_23_63_1.01377546809209_6.50688773404605_5.32948049624563-2 chr4 83325418 83325936 + 5.32948049624563 NA Intergenic Intergenic -1488 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_73_680_-0.405115025614306_9.20895347520492_5.32878243100925 chr6 142387122 142387880 + 5.32878243100925 NA promoter-TSS (NM_023042) promoter-TSS (NM_023042) 258 NM_025872 66964 Mm.3676 NM_025872 ENSMUSG00000030245 Golt1b 2310061A22Rik|AA407874|AU024291|CGI-141 golgi transport 1B protein-coding common_peak2_259_2080_0.207077892970274_11.1266001962205_5.32871909472738 chr19 7293479 7296620 + 5.32871909472738 NA 5' UTR (NM_001080390, exon 1 of 18) 5' UTR (NM_001080390, exon 1 of 18) 398 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak2_77_401_0.448504069615289_8.87530372598657_5.32821137583411 chr11 11569055 11571148 + 5.32821137583411 NA Intergenic Intergenic 57737 NM_001305143 102631730 Mm.159430 NM_001305143 ENSMUSG00000062511 4930512M02Rik - RIKEN cDNA 4930512M02 gene protein-coding common_peak2_77_401_0.448504069615289_8.87530372598657_5.32821137583411-2 chr2 60036701 60037748 + 5.32821137583411 NA intron (NM_001001182, intron 2 of 35) intron (NM_001001182, intron 2 of 35) 88516 NM_001001182 407823 Mm.228071 NM_001001182 ENSMUSG00000026987 Baz2b 5830435C13Rik|BC053917|D2Ertd794e bromodomain adjacent to zinc finger domain, 2B protein-coding common_peak2_244_1923_0.215088740018963_11.0174374537795_5.32683457764698 chr5 8055384 8057736 + 5.32683457764698 NA promoter-TSS (NM_001080974) promoter-TSS (NM_001080974) 18 NM_001080974 109552 Mm.96211 NM_025618 ENSMUSG00000003161 Sri 2210417O06Rik|2900070H08Rik|Sor sorcin protein-coding unique_peak1_21_54_1.07843802916929_6.32057872810931_5.32620240499701 chr10 44630588 44631080 + 5.32620240499701 NA Intergenic Intergenic -172086 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding common_peak1_21_54_1.07843802916929_6.32057872810931_5.32620240499701 chr9 118450631 118451156 + 5.32620240499701 NA Intergenic Intergenic 21054 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak1_58_536_-0.463251872943587_8.83715234151362_5.3205563286988 chr13 55189772 55190561 + 5.3205563286988 NA Intergenic Intergenic -19616 NM_008739 18193 Mm.12964 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak2_58_536_-0.463251872943587_8.83715234151362_5.3205563286988 chr1 170226898 170229243 + 5.3205563286988 NA Intergenic Intergenic -4801 NM_001033499 545378 Mm.379942 NM_001033499 ENSMUSG00000073494 Sh2d1b2 EAT-2B|Eat2b|Ert|Sh2d1c SH2 domain containing 1B2 protein-coding common_peak1_161_1606_-0.25719981949586_10.5215543039272_5.32022115479228 chr11 94209740 94211284 + 5.32022115479228 NA promoter-TSS (NM_009427) promoter-TSS (NM_009427) -942 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding common_peak1_161_1606_-0.25719981949586_10.5215543039272_5.32022115479228-2 chr19 4099267 4100867 + 5.32022115479228 NA promoter-TSS (NM_008851) promoter-TSS (NM_008851) 69 NR_075078 18739 Mm.1860 NM_008851 ENSMUSG00000024851 Pitpnm1 DRES9|Mpt-1|Nir-2|PITPnm 1|Pitpnm|R75447|Rd9|RdgB|RdgB1 phosphatidylinositol transfer protein, membrane-associated 1 protein-coding common_peak1_77_720_-0.394299688446605_9.29670560501752_5.31991058868956 chr10 128695649 128696340 + 5.31991058868956 NA intron (NM_177411, intron 1 of 5) CpG 274 NM_177411 19344 Mm.12815 NM_011229 ENSMUSG00000000711 Rab5b C030027M18Rik RAB5B, member RAS oncogene family protein-coding common_peak1_120_743_0.337408033527417_9.70786282787174_5.31981651865706 chr6 134830074 134830902 + 5.31981651865706 NA intron (NM_177687, intron 1 of 4) CpG 289 NM_177687 232430 Mm.267010 NM_177687 ENSMUSG00000032652 Crebl2 AI046348|B230205M03 cAMP responsive element binding protein-like 2 protein-coding common_peak2_107_635_0.362549233927952_9.49415757224833_5.31919408395033 chr7 110955394 110957450 + 5.31919408395033 NA intron (NM_194464, intron 1 of 20) intron (NM_194464, intron 1 of 20) -10235 NM_010826 17540 Mm.250023 NM_010826 ENSMUSG00000005611 Mrvi1 BB115629|Irag|Ris1 MRV integration site 1 protein-coding common_peak1_184_1864_-0.23707067705287_10.7464245766162_5.31778648898143 chr8 83697728 83699944 + 5.31778648898143 NA intron (NM_177262, intron 1 of 21) CpG 343 NM_177262 320795 Mm.213000 NM_177262 ENSMUSG00000057672 Pkn1 DBK|F730027O18Rik|PAK1|PRK1|Pkn|Prkcl1|Stk3 protein kinase N1 protein-coding common_peak1_25_73_0.945967879011982_6.68243730513494_5.31712095677987 chr11 51833131 51833706 + 5.31712095677987 NA intron (NM_199299, intron 4 of 11) intron (NM_199299, intron 4 of 11) 24063 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak1_25_73_0.945967879011982_6.68243730513494_5.31712095677987-2 chr17 22423844 22424333 + 5.31712095677987 NA promoter-TSS (NM_198003) promoter-TSS (NM_198003) -180 NM_198003 74149 Mm.30767 NM_198003 ENSMUSG00000071266 Zfp946 1300003B13Rik zinc finger protein 946 protein-coding common_peak1_25_73_0.945967879011982_6.68243730513494_5.31712095677987-3 chr2 32728428 32729045 + 5.31712095677987 NA intron (NM_001252547, intron 1 of 10) intron (NM_001252547, intron 1 of 10) 1047 NM_001252547 27387 Mm.9593 NM_013781 ENSMUSG00000059013 Sh2d3c Chat|Nsp3|Shep1 SH2 domain containing 3C protein-coding common_peak1_343_3002_0.173375344255868_11.6388764316851_5.3165239741866 chr12 4916832 4918838 + 5.3165239741866 NA exon (NM_001099628, exon 1 of 31) exon (NM_001099628, exon 1 of 31) 482 NM_001099628 320817 Mm.210966 NM_001099628 ENSMUSG00000052812 Atad2b 1110014E10Rik|BC032887|C79189|D530031C13Rik ATPase family, AAA domain containing 2B protein-coding common_peak1_108_643_0.360825357415019_9.51132955682213_5.3153535321281 chr8 71779311 71781369 + 5.3153535321281 NA Intergenic RLTR4_Mm|LTR|ERV1 -54659 NM_028715 74015 Mm.22025 NM_028715 ENSMUSG00000070000 Fcho1 3322402E17Rik|N28152 FCH domain only 1 protein-coding common_peak1_156_1061_0.284907583601496_10.1950218426049_5.31504917827745 chr2 35460378 35462452 + 5.31504917827745 NA promoter-TSS (NM_001308300) promoter-TSS (NM_001308300) 34 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak1_199_1469_0.244251685971726_10.6437262827096_5.31184058856539 chr19 36925312 36926903 + 5.31184058856539 NA promoter-TSS (NM_001080706) promoter-TSS (NM_001080706) 28 NM_001080706 107182 Mm.295062 NM_001080706 ENSMUSG00000040565 Btaf1 AI414500|AI447930|E430027O22Rik|TAF170 B-TFIID TATA-box binding protein associated factor 1 protein-coding common_peak2_21_201_-0.798413740057843_7.25900461272287_5.31128678995961 chr1 171360653 171361446 + 5.31128678995961 NA promoter-TSS (NM_001033039) promoter-TSS (NM_001033039) -251 NM_001033039 68874 Mm.10756 NM_001033039 ENSMUSG00000045259 Klhdc9 1190002J23Rik|AA087357|ESTM31 kelch domain containing 9 protein-coding common_peak1_108_1034_-0.323672816857052_9.85357864395816_5.31114500562381 chr11 86484623 86485537 + 5.31114500562381 NA intron (NM_029788, intron 1 of 8) CpG 423 NM_029788 76892 Mm.262707 NM_029788 ENSMUSG00000020521 Rnft1 0610013E23Rik|AV007605 ring finger protein, transmembrane 1 protein-coding unique_peak2_12_126_-1.05987575331759_6.45874681011337_5.31106738297285 chr10 30716109 30716904 + 5.31106738297285 NA intron (NM_172495, intron 3 of 15) B1F|SINE|Alu -60639 NM_001111267 211329 Mm.297903 NM_172495 ENSMUSG00000039697 Ncoa7 9030406N13Rik nuclear receptor coactivator 7 protein-coding common_peak2_64_593_-0.43740460046787_8.99561682056683_5.30989546768089 chr9 121277027 121278498 + 5.30989546768089 NA promoter-TSS (NM_177589) promoter-TSS (NM_177589) -590 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding common_peak1_74_690_-0.402392192098592_9.23134580433896_5.30951917121049 chr1 133609578 133610324 + 5.30951917121049 NA intron (NM_009227, intron 1 of 4) CpG 329 NM_009227 20643 Mm.249110 NM_009227 ENSMUSG00000090553 Snrpe AL022645|C76690|SME small nuclear ribonucleoprotein E protein-coding common_peak2_109_1044_-0.321383897395974_9.86859527827026_5.30843377480609 chr7 75454770 75456579 + 5.30843377480609 NA 5' UTR (NM_029332, exon 1 of 37) 5' UTR (NM_029332, exon 1 of 37) 140 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_20_50_1.105049301827_6.224949992885_5.30832766115876 chr13 43172540 43172977 + 5.30832766115876 NA Intergenic MTC|LTR|ERVL-MaLR -1257 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_20_50_1.105049301827_6.224949992885_5.30832766115876-2 chr9 32742688 32743094 + 5.30832766115876 NA intron (NM_011808, intron 6 of 7) intron (NM_011808, intron 6 of 7) 46849 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_381_4284_-0.154095671826711_11.9880316530865_5.30803241609096 chr5 144221593 144224297 + 5.30803241609096 NA intron (NM_027410, intron 1 of 24) intron (NM_027410, intron 1 of 24) 633 NM_027410 70381 Mm.239412 NM_027410 ENSMUSG00000066621 Tecpr1 2210010N04Rik|mKIAA1358 tectonin beta-propeller repeat containing 1 protein-coding common_peak1_24_227_-0.746874822028357_7.45945260315056_5.30797465476885 chr12 54655755 54656317 + 5.30797465476885 NA intron (NM_134054, intron 1 of 1) intron (NM_134054, intron 1 of 1) 536 NM_134054 104725 Mm.485026 NM_134054 ENSMUSG00000044408 Sptssa 1110002B05Rik|AA407909|AA409588|AU041967|Ssspta serine palmitoyltransferase, small subunit A protein-coding common_peak2_37_136_0.72894443162272_7.46250429877189_5.30797465476885 chr2 129174544 129175462 + 5.30797465476885 NA Intergenic Intergenic 5670 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 OTTMUSG00000015420 expressed sequence AI847159 ncRNA common_peak1_54_497_-0.478710913682166_8.720646475227_5.30730307681256 chr5 142463053 142463920 + 5.30730307681256 NA promoter-TSS (NM_172725) promoter-TSS (NM_172725) -445 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding common_peak2_71_357_0.474094206981123_8.72086288075482_5.30730307681256 chr2 25167324 25169158 + 5.30730307681256 NA Intergenic Intergenic -12517 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak1_42_165_0.670687738907026_7.71038330080044_5.30700727719518 chr1 43550862 43551693 + 5.30700727719518 NA intron (NM_010879, intron 3 of 4) intron (NM_010879, intron 3 of 4) 105526 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_42_165_0.670687738907026_7.71038330080044_5.30700727719518-3 chr5 139830589 139831251 + 5.30700727719518 NA Intergenic ORR1E|LTR|ERVL-MaLR -4077 NM_025604 66506 Mm.29070 NM_025604 ENSMUSG00000029551 Psmg3 1810042K04Rik|4930403H09Rik|AI303239 proteasome (prosome, macropain) assembly chaperone 3 protein-coding common_peak1_42_165_0.670687738907026_7.71038330080044_5.30700727719518-2 chr2 22795105 22795955 + 5.30700727719518 NA intron (NM_019456, intron 1 of 13) RLTR13C1|LTR|ERVK 21203 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak2_42_165_0.670687738907026_7.71038330080044_5.30700727719518 chr13 112660519 112661304 + 5.30700727719518 NA intron (NM_178746, intron 1 of 14) intron (NM_178746, intron 1 of 14) 145 NM_178746 268706 Mm.40834 NM_175376 ENSMUSG00000047789 Slc38a9 4833412L08Rik|6720411P22Rik|9130023D20Rik|9430067K09Rik|A730092C09 solute carrier family 38, member 9 protein-coding common_peak1_42_165_0.670687738907026_7.71038330080044_5.30700727719518-4 chr9 56160303 56161095 + 5.30700727719518 NA intron (NM_019793, intron 1 of 6) CpG 371 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_125_786_0.328001645630652_9.78422064832281_5.30651085373268 chr11 75655442 75656803 + 5.30651085373268 NA 5' UTR (NM_001080775, exon 1 of 32) 5' UTR (NM_001080775, exon 1 of 32) 107 NM_001080775 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding common_peak2_93_880_-0.353254810308039_9.6063708037664_5.30629300647158-2 chr8 83572273 83574163 + 5.30629300647158 NA intron (NM_134118, intron 5 of 12) intron (NM_134118, intron 5 of 12) 6460 NM_025843 66916 Mm.29683 NM_025843 ENSMUSG00000033938 Ndufb7 1110002H15Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 protein-coding common_peak2_93_880_-0.353254810308039_9.6063708037664_5.30629300647158 chr16 44723832 44725281 + 5.30629300647158 NA intron (NM_145972, intron 1 of 8) CpG 255 NM_145972 212547 Mm.310573 NM_145972 ENSMUSG00000036208 Nepro - nucleolus and neural progenitor protein protein-coding common_peak1_241_1893_0.215958540353419_10.9951998856451_5.30595145756996 chr7 122315242 122318273 + 5.30595145756996 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 27632 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak2_151_1016_0.290097173098458_10.1351525504067_5.30430815957392 chr11 58183093 58185627 + 5.30430815957392 NA intron (NM_001135115, intron 1 of 1) intron (NM_001135115, intron 1 of 1) 517 NM_001135115 631323 Mm.394103 NM_001135115 Gm12250 Irgb10|OTTMUSG00000005723 predicted gene 12250 protein-coding common_peak1_152_1506_-0.265658408317083_10.4246344974393_5.30426992081221 chr12 111166357 111167388 + 5.30426992081221 NA intron (NM_001286122, intron 1 of 9) CpG 502 NM_011632 22031 Mm.27431 NM_011632 ENSMUSG00000021277 Traf3 AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn TNF receptor-associated factor 3 protein-coding common_peak2_147_979_0.296370334581553_10.0848231062933_5.30322917700726 chr14 40946810 40949695 + 5.30322917700726 NA promoter-TSS (NM_001316748) promoter-TSS (NM_001316748) -43 NM_001316748 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding common_peak2_224_1719_0.226091374853493_10.8612385370162_5.30266015607242 chr6 58830757 58834918 + 5.30266015607242 NA promoter-TSS (NM_028705) promoter-TSS (NM_028705) -863 NM_028705 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding common_peak1_20_193_-0.82243819838863_7.18869374299281_5.30175825155699 chr10 120634302 120634848 + 5.30175825155699 NA Intergenic MER68|LTR|ERVL -131157 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak2_20_193_-0.82243819838863_7.18869374299281_5.30175825155699-2 chr9 122188986 122189823 + 5.30175825155699 NA intron (NM_133979, intron 12 of 12) intron (NM_133979, intron 12 of 12) 72138 NM_133741 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding unique_peak2_20_193_-0.82243819838863_7.18869374299281_5.30175825155699 chr3 144698369 144699862 + 5.30175825155699 NA intron (NM_001282042, intron 5 of 9) intron (NM_001282042, intron 5 of 9) 21220 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_20_193_-0.82243819838863_7.18869374299281_5.30175825155699-2 chr12 21459796 21460301 + 5.30175825155699 NA Intergenic B1_Mur3|SINE|Alu -42612 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_88_829_-0.363949157470099_9.51499294749924_5.30167465734699 chr2 34771057 34771806 + 5.30167465734699 NA promoter-TSS (NM_022310) promoter-TSS (NM_022310) -659 NM_001163434 14828 Mm.330160 NM_022310 ENSMUSG00000026864 Hspa5 AL022860|AU019543|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|SEZ-7|Sez7|baffled|mBiP heat shock protein 5 protein-coding common_peak2_128_812_0.322750144332206_9.82848661424113_5.30092961498446 chr2 39064753 39066432 + 5.30092961498446 NA promoter-TSS (NR_110968) promoter-TSS (NR_110968) -51 NM_029793 76899 Mm.131098 NM_029793 ENSMUSG00000026754 Golga1 0710001G09Rik|2210418B03Rik|AW107649|Golgi97|awag|golgin-97 golgi autoantigen, golgin subfamily a, 1 protein-coding unique_peak2_9_101_-1.20790342552708_6.06847362920796_5.30039556030909-2 chr7 119739901 119740243 + 5.30039556030909 NA Intergenic GC_rich|Low_complexity|Low_complexity -19274 NM_145585 233802 Mm.26392 NM_145585 ENSMUSG00000030942 Thumpd1 6330575P11Rik THUMP domain containing 1 protein-coding unique_peak2_9_101_-1.20790342552708_6.06847362920796_5.30039556030909 chr4 148591402 148592005 + 5.30039556030909 NA exon (NM_009272, exon 1 of 7) exon (NM_009272, exon 1 of 7) 190 NM_009272 20810 Mm.10 NM_009272 ENSMUSG00000006442 Srm AA407669|SpdST|SpdSy spermidine synthase protein-coding common_peak2_59_274_0.531980935372038_8.36927827609804_5.29815248780283 chr4 129882195 129883776 + 5.29815248780283 NA Intergenic B4|SINE|B4 -23241 NR_045190 319894 Mm.59196 NR_045190 ENSMUSG00000086369 E330017L17Rik - RIKEN cDNA E330017L17 gene ncRNA common_peak1_30_279_-0.662600812210661_7.79798261083964_5.29758062283037 chr11 116671579 116672217 + 5.29758062283037 NA promoter-TSS (NR_028569) promoter-TSS (NR_028569) 238 NR_027820 66293 Mm.432051 NM_025472 ENSMUSG00000020812 1810032O08Rik - RIKEN cDNA 1810032O08 gene ncRNA common_peak1_44_177_0.650445206598234_7.80095603426551_5.29758062283037 chr11 20830745 20831509 + 5.29758062283037 NA promoter-TSS (NM_173752) promoter-TSS (NM_173752) -19 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak2_62_573_-0.443297766723905_8.94325804331373_5.2963630324693 chr2 117373509 117375472 + 5.2963630324693 NA Intergenic Intergenic -31613 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_79_416_0.440455276558826_8.92413121172408_5.29593032419548 chr10 117147714 117148676 + 5.29593032419548 NA intron (NM_177798, intron 1 of 9) CpG 279 NM_177798 327826 Mm.135965 NM_177798 ENSMUSG00000020170 Frs2 4732458E18|C330018A15Rik|Frs2alpha|SNT1 fibroblast growth factor receptor substrate 2 protein-coding common_peak2_165_1144_0.274986297370397_10.2986250316695_5.29560775633373 chr5 33334589 33337000 + 5.29560775633373 NA intron (NM_021500, intron 1 of 8) CpG 222 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding common_peak1_166_1154_0.27306946938454_10.3102118709957_5.29560613902999 chr2 91648985 91650824 + 5.29560613902999 NA promoter-TSS (NM_001145902) promoter-TSS (NM_001145902) -113 NM_001033451 381410 Mm.330401 NM_001033451 ENSMUSG00000075040 Zfp408 Gm1011 zinc finger protein 408 protein-coding common_peak2_268_2177_0.201570882852101_11.189573680143_5.29477524970935 chr17 57076556 57080010 + 5.29477524970935 NA intron (NM_153551, intron 1 of 23) intron (NM_153551, intron 1 of 23) 227 NM_153551 70785 Mm.284447 NM_153551 ENSMUSG00000002668 Dennd1c 4432409M07Rik DENN/MADD domain containing 1C protein-coding unique_peak1_22_59_1.03157020848499_6.42267569985101_5.29409398715742 chr5 73240400 73241026 + 5.29409398715742 NA intron (NM_028194, intron 1 of 62) intron (NM_028194, intron 1 of 62) 15905 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_22_59_1.03157020848499_6.42267569985101_5.29409398715742 chr2 68465568 68466056 + 5.29409398715742 NA intron (NM_016866, intron 1 of 17) ID_B1|SINE|B4 6169 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding common_peak1_22_59_1.03157020848499_6.42267569985101_5.29409398715742-2 chr9 63712832 63713362 + 5.29409398715742 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 44897 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_272_2219_0.200135597635862_11.2164117600554_5.29369238948992 chr14 27428189 27430090 + 5.29369238948992 NA exon (NM_028945, exon 1 of 24) exon (NM_028945, exon 1 of 24) 292 NM_001114879 218850 Mm.247767 NM_028945 ENSMUSG00000040651 Fam208a 4732418E12|4933409E02Rik|D14Abb1e|MommeD6 family with sequence similarity 208, member A protein-coding common_peak1_65_602_-0.432081933052848_9.01997322537366_5.29255890932421 chr14 52304275 52305381 + 5.29255890932421 NA intron (NM_019721, intron 1 of 10) CpG 296 NM_019721 56335 Mm.271759 NM_019721 ENSMUSG00000022160 Mettl3 2310024F18Rik|M6A|Spo8 methyltransferase like 3 protein-coding common_peak1_65_602_-0.432081933052848_9.01997322537366_5.29255890932421-2 chr19 8757071 8757789 + 5.29255890932421 NA promoter-TSS (NR_132424) promoter-TSS (NR_132424) 313 NM_001276704 53319 Mm.7271 NM_016813 ENSMUSG00000010097 Nxf1 Mex67|Mvb1|Tap nuclear RNA export factor 1 protein-coding common_peak1_319_3488_-0.171014409818175_11.6830906772853_5.29238630732709 chr11 51262391 51264808 + 5.29238630732709 NA promoter-TSS (NM_177567) promoter-TSS (NM_177567) 485 NM_007714 12750 Mm.239354 NM_007714 ENSMUSG00000020385 Clk4 AI987988|C85119 CDC like kinase 4 protein-coding common_peak1_57_525_-0.463643363593377_8.80709730749561_5.2921089925766-2 chr7 28962529 28963131 + 5.2921089925766 NA promoter-TSS (NM_021895) promoter-TSS (NM_021895) -550 NM_021895 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak1_57_525_-0.463643363593377_8.80709730749561_5.2921089925766 chr1 180404029 180404481 + 5.2921089925766 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -73706 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_343_3003_0.172895006298745_11.6391166006636_5.28963808523135 chr19 5687460 5691525 + 5.28963808523135 NA promoter-TSS (NM_144868) promoter-TSS (NM_144868) 361 NM_022012 26403 Mm.185026 NM_022012 ENSMUSG00000004054 Map3k11 2610017K16Rik|Mlk3|PTK1|SPRK mitogen-activated protein kinase kinase kinase 11 protein-coding common_peak1_103_982_-0.332401739326937_9.77484673667711_5.28802423251451 chr6 50565700 50566603 + 5.28802423251451 NA promoter-TSS (NR_027892) promoter-TSS (NR_027892) 323 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding common_peak2_322_2767_0.179468218354593_11.524362336814_5.28680296762915 chr5 123393838 123399562 + 5.28680296762915 NA intron (NM_177582, intron 1 of 8) B1F1|SINE|Alu 1902 NM_133917 208104 Mm.83277 NM_133917 ENSMUSG00000038342 Mlxip AW228700|Mir|bHLHe36 MLX interacting protein protein-coding common_peak1_46_423_-0.524789367137181_8.46552577099461_5.28268602963198-2 chr6 113494106 113494814 + 5.28268602963198 NA exon (NM_001289699, exon 4 of 4) exon (NM_001289699, exon 4 of 4) 7358 NM_172487 210673 Mm.133060 NM_172487 ENSMUSG00000045009 Prrt3 6330505P20|B230206N24Rik proline-rich transmembrane protein 3 protein-coding common_peak1_46_423_-0.524789367137181_8.46552577099461_5.28268602963198 chr4 3938727 3939352 + 5.28268602963198 NA promoter-TSS (NM_019969) promoter-TSS (NM_019969) 151 NM_001285804 66433 Mm.27406 NM_181391 ENSMUSG00000042198 Chchd7 1810049H20Rik coiled-coil-helix-coiled-coil-helix domain containing 7 protein-coding common_peak2_314_2678_0.182235880987722_11.4785968063362_5.28089745559453 chr3 14885804 14892352 + 5.28089745559453 NA intron (NM_009801, intron 2 of 6) B1_Mus2|SINE|Alu 2652 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding common_peak2_29_270_-0.673492608756168_7.74540273697579_5.27958339112652 chr11 87852846 87853951 + 5.27958339112652 NA intron (NM_001039684, intron 1 of 17) intron (NM_001039684, intron 1 of 17) 173 NM_001039684 380718 Mm.24404 NM_001039684 ENSMUSG00000034121 Mks1 AK190930|B8d3 Meckel syndrome, type 1 protein-coding common_peak2_214_1619_0.232054659360283_10.7778054274521_5.27924052082597 chr1 86486616 86488746 + 5.27924052082597 NA Intergenic CpG -39055 NM_008972 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak1_39_359_-0.574106557512541_8.2047998175734_5.27872532295112 chr11 87965452 87966266 + 5.27872532295112 NA Intergenic Intergenic 20726 NM_001168472 68097 Mm.246436 NM_026556 ENSMUSG00000020483 Dynll2 1700064A15Rik|6720463E02Rik|C87222|DLC8|DLC8b|Dlc2 dynein light chain LC8-type 2 protein-coding common_peak2_116_710_0.343372216141729_9.64539185769028_5.27866705923298 chr13 55021992 55024008 + 5.27866705923298 NA Intergenic Intergenic -1615 NM_001033245 212032 Mm.267479 NM_001033245 ENSMUSG00000025877 Hk3 HK III|HK-III hexokinase 3 protein-coding common_peak2_324_3550_-0.168989537809756_11.7095148761161_5.27818133867923 chr6 72954321 72959327 + 5.27818133867923 NA TTS (NM_001190327) TTS (NM_001190327) 1408 NM_001039392 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding common_peak1_76_394_0.451012697708601_8.85121519191877_5.2772052505942 chr2 60036730 60037651 + 5.2772052505942 NA intron (NM_001001182, intron 2 of 35) intron (NM_001001182, intron 2 of 35) 88550 NM_001001182 407823 Mm.228071 NM_001001182 ENSMUSG00000026987 Baz2b 5830435C13Rik|BC053917|D2Ertd794e bromodomain adjacent to zinc finger domain, 2B protein-coding common_peak2_80_424_0.435023051967814_8.94883055700897_5.27620681808063 chr10 79096862 79098117 + 5.27620681808063 NA 5' UTR (NM_001004362, exon 1 of 6) 5' UTR (NM_001004362, exon 1 of 6) 111 NM_001004362 72128 Mm.297854 NM_001004362 ENSMUSG00000060301 2610008E11Rik - RIKEN cDNA 2610008E11 gene protein-coding common_peak1_348_3061_0.170841729764479_11.665679432382_5.27537950603054 chr10 17721724 17724558 + 5.27537950603054 NA promoter-TSS (NM_010828) promoter-TSS (NM_010828) -87 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_341_2981_0.17318100460637_11.6286550445866_5.27348665726629 chr6 31124528 31128017 + 5.27348665726629 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -63179 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_91_859_-0.356507423123237_9.56993913802784_5.27321562138876 chr13 74208118 74209388 + 5.27321562138876 NA promoter-TSS (NM_177333) promoter-TSS (NM_177333) -53 NM_177333 211446 Mm.261859 NM_177333 ENSMUSG00000034152 Exoc3 2810050O03Rik|E430013E20Rik|Sec6|Sec6l1 exocyst complex component 3 protein-coding common_peak1_182_1305_0.257714785653825_10.4797965743733_5.27309773226871 chr10 117375790 117377253 + 5.27309773226871 NA intron (NM_001310609, intron 1 of 9) CpG 452 NM_001013391 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding common_peak1_33_114_0.784658521216152_7.23781931155245_5.27301603321294-2 chr7 128297469 128298153 + 5.27301603321294 NA exon (NM_145590, exon 1 of 13) exon (NM_145590, exon 1 of 13) 320 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak2_33_114_0.784658521216152_7.23781931155245_5.27301603321294 chr16 92465651 92466383 + 5.27301603321294 NA exon (NM_001081549, exon 1 of 4) exon (NM_001081549, exon 1 of 4) 152 NM_001081549 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding common_peak1_33_114_0.784658521216152_7.23781931155245_5.27301603321294 chr16 3847105 3847579 + 5.27301603321294 NA 5' UTR (NM_001081217, exon 1 of 3) 5' UTR (NM_001081217, exon 1 of 3) 119 NM_001081217 385674 Mm.244261 NM_001081217 ENSMUSG00000054939 Zfp174 Gm1754 zinc finger protein 174 protein-coding common_peak2_97_555_0.384547475373534_9.31121481041027_5.27261149963357 chr7 99857869 99859437 + 5.27261149963357 NA promoter-TSS (NM_001164258) promoter-TSS (NM_001164258) 230 NM_025668 66624 Mm.30043 NM_025668 ENSMUSG00000035227 Spcs2 5730406I15Rik|AA408713|mKIAA0102 signal peptidase complex subunit 2 homolog (S. cerevisiae) protein-coding common_peak1_73_679_-0.402994973739936_9.20789344926773_5.27238542410802 chr9 32593659 32594437 + 5.27238542410802 NA Intergenic Intergenic -52596 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak2_412_4690_-0.146617271188687_12.1223711499016_5.27224651493129 chr4 6450525 6455533 + 5.27224651493129 NA intron (NM_010945, intron 1 of 30) intron (NM_010945, intron 1 of 30) 1242 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding common_peak1_86_808_-0.367198061764125_9.47639686154792_5.27172334473568 chr2 157278755 157279784 + 5.27172334473568 NA exon (NM_001039557, exon 1 of 25) exon (NM_001039557, exon 1 of 25) 171 NM_019642 20014 Mm.22130 NM_019642 ENSMUSG00000027642 Rpn2 1300012C06Rik|AV261018|Rpn-2 ribophorin II protein-coding common_peak2_370_3314_0.164484719708632_11.7770355148543_5.27136130619055 chr17 26506124 26509838 + 5.27136130619055 NA exon (NM_013642, exon 1 of 4) exon (NM_013642, exon 1 of 4) 491 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak2_190_1932_-0.232254416224441_10.800498714099_5.2704929254576 chr11 83549098 83552196 + 5.2704929254576 NA Intergenic L1MEa|LINE|L1 -20129 NM_013653 20304 Mm.284248 NM_013653 ENSMUSG00000035042 Ccl5 MuRantes|RANTES|SISd|Scya5|TCP228 chemokine (C-C motif) ligand 5 protein-coding common_peak1_36_332_-0.599594715859851_8.07958100914134_5.27005026628916 chr2 180455892 180456643 + 5.27005026628916 NA Intergenic Intergenic -4711 NM_148933 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding unique_peak1_29_93_0.854067580920066_6.98162264213767_5.26878785230724 chr5 64359721 64360516 + 5.26878785230724 NA Intergenic MLTR14|LTR|ERV1 107824 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA common_peak1_60_281_0.524968098648179_8.40203540172288_5.26740418257621 chr5 24164649 24165691 + 5.26740418257621 NA exon (NM_153092, exon 1 of 7) exon (NM_153092, exon 1 of 7) 207 NM_153092 231042 Mm.45513 NM_153092 ENSMUSG00000048439 Nupl2 AV116043|CG1|NLP-1|Nlp1 nucleoporin like 2 protein-coding common_peak1_91_508_0.400163580390528_9.19160363627096_5.26657359033555 chr14 75284322 75285163 + 5.26657359033555 NA intron (NM_026083, intron 1 of 18) CpG 369 NM_026083 67302 Mm.74704 NM_026083 ENSMUSG00000022000 Zc3h13 2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618 zinc finger CCCH type containing 13 protein-coding common_peak1_91_508_0.400163580390528_9.19160363627096_5.26657359033555-3 chr6 34316811 34318130 + 5.26657359033555 NA promoter-TSS (NR_037965) promoter-TSS (NR_037965) 19 NM_009658 11677 Mm.451 NM_009658 ENSMUSG00000001642 Akr1b3 ALR2|AR|Ahr-1|Ahr1|Akr1b1|Aldor1|Aldr1 aldo-keto reductase family 1, member B3 (aldose reductase) protein-coding common_peak1_91_508_0.400163580390528_9.19160363627096_5.26657359033555-2 chr4 108300180 108301119 + 5.26657359033555 NA intron (NM_001033634, intron 1 of 13) intron (NM_001033634, intron 1 of 13) 441 NM_001033634 414872 Mm.426241 NM_001033634 ENSMUSG00000034636 Zyg11b 1110046I03Rik|2810482G21Rik|D4Mgi23|Gm431|mKIAA1730 zyg-ll family member B, cell cycle regulator protein-coding common_peak1_108_1033_-0.322278234785298_9.85288135292229_5.26543421506917 chr6 127453209 127454437 + 5.26543421506917 NA promoter-TSS (NM_181402) promoter-TSS (NM_181402) 100 NM_181402 101187 Mm.110818 NM_181402 ENSMUSG00000037997 Parp11 5330431N24Rik|AI851877|ARTD11|HIN1L|PARP-11 poly (ADP-ribose) polymerase family, member 11 protein-coding unique_peak2_11_117_-1.0954798924561_6.33490310313379_5.26499012825474 chr19 29236885 29237620 + 5.26499012825474 NA Intergenic Intergenic -14551 NM_001048177 16452 Mm.275839 NM_008413 ENSMUSG00000024789 Jak2 Fd17 Janus kinase 2 protein-coding common_peak1_11_117_-1.0954798924561_6.33490310313379_5.26499012825474 chr6 30346931 30347245 + 5.26499012825474 NA Intergenic L2|LINE|L2 -42549 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding unique_peak2_28_261_-0.684759687024882_7.69104315802501_5.26437689501003 chr4 126193423 126195094 + 5.26437689501003 NA intron (NM_146153, intron 1 of 10) intron (NM_146153, intron 1 of 10) 8452 NM_146153 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak2_86_469_0.416280884100853_9.08465738861543_5.26434923102851 chr6 30336162 30337723 + 5.26434923102851 NA Intergenic L2a|LINE|L2 -32403 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak1_109_1043_-0.320002666997613_9.86790466307108_5.26295366728597 chr5 105110323 105111691 + 5.26295366728597 NA promoter-TSS (NM_172777) promoter-TSS (NM_172777) -715 NM_172777 236573 Mm.425261 NM_172777 ENSMUSG00000029298 Gbp9 - guanylate-binding protein 9 protein-coding common_peak2_109_1043_-0.320002666997613_9.86790466307108_5.26295366728597 chr15 94542931 94544454 + 5.26295366728597 NA promoter-TSS (NM_029926) promoter-TSS (NM_029926) 32 NM_029926 266632 Mm.422858 NM_029926 ENSMUSG00000059883 Irak4 8430405M07Rik|9330209D03Rik|IRAK-4|NY-REN-64 interleukin-1 receptor-associated kinase 4 protein-coding common_peak1_150_1007_0.291240461485636_10.1229001542427_5.26080950448796 chr7 13033815 13035334 + 5.26080950448796 NA TTS (NM_145578) TTS (NM_145578) 203 NM_026885 68953 Mm.295670 NM_026885 ENSMUSG00000033916 Chmp2a 1500016L11Rik charged multivesicular body protein 2A protein-coding common_peak1_152_1026_0.287584826962545_10.1480128797995_5.26027186882668 chr16 4585779 4588090 + 5.26027186882668 NA Intergenic CpG -7779 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding unique_peak1_15_30_1.34205695273829_5.62522478675602_5.25998910104472 chr11 118396895 118397358 + 5.25998910104472 NA intron (NM_011150, intron 4 of 5) intron (NM_011150, intron 4 of 5) 4805 NM_011150 19039 Mm.3152 NM_011150 ENSMUSG00000033880 Lgals3bp 90K|CyCAP|MAC-2BP|Ppicap|Tango10b lectin, galactoside-binding, soluble, 3 binding protein protein-coding unique_peak1_15_30_1.34205695273829_5.62522478675602_5.25998910104472-2 chr13 20801346 20801754 + 5.25998910104472 NA intron (NM_001281854, intron 1 of 4) L1M4a1|LINE|L1 7437 NM_012054 27052 Mm.314046 NM_012054 ENSMUSG00000021322 Aoah 4930433E13Rik acyloxyacyl hydrolase protein-coding unique_peak1_15_30_1.34205695273829_5.62522478675602_5.25998910104472-3 chr2 178293411 178293837 + 5.25998910104472 NA intron (NM_001177789, intron 7 of 12) L2a|LINE|L2 100540 NM_001007154 74189 Mm.44413 NM_028806 ENSMUSG00000027525 Phactr3 1500003N10Rik|4930415A02Rik|H17739|Scapin1|Scapinin|mKIAA4224 phosphatase and actin regulator 3 protein-coding unique_peak1_15_30_1.34205695273829_5.62522478675602_5.25998910104472-4 chr4 132794038 132794421 + 5.25998910104472 NA intron (NM_001033308, intron 1 of 5) intron (NM_001033308, intron 1 of 5) 2135 NM_001033308 230787 Mm.290912 NM_001033308 ENSMUSG00000037731 Themis2 ICB-1 thymocyte selection associated family member 2 protein-coding unique_peak1_15_30_1.34205695273829_5.62522478675602_5.25998910104472-5 chr4 135198036 135198458 + 5.25998910104472 NA Intergenic Intergenic 74513 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak1_38_349_-0.578267662224468_8.16207728072009_5.25933468598717 chr1 53782773 53783556 + 5.25933468598717 NA intron (NM_133810, intron 1 of 7) PB1D9|SINE|Alu 2051 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak1_53_234_0.572302931460952_8.16266841229547_5.25933468598717-2 chr18 57354672 57355300 + 5.25933468598717 NA intron (NM_028447, intron 1 of 8) CpG 253 NM_028447 73137 Mm.29889 NM_028447 ENSMUSG00000024594 Prrc1 1190002C06Rik|2310058D16Rik|3110038B19Rik|9430085A19Rik proline-rich coiled-coil 1 protein-coding common_peak1_53_234_0.572302931460952_8.16266841229547_5.25933468598717 chr11 29246559 29247358 + 5.25933468598717 NA intron (NM_025740, intron 1 of 9) intron (NM_025740, intron 1 of 9) 314 NM_025740 216618 Mm.128663 NM_025740 ENSMUSG00000020462 Cfap36 2300003H10|4931428D14Rik|Ccdc104 cilia and flagella associated protein 36 protein-coding common_peak2_38_349_-0.578267662224468_8.16207728072009_5.25933468598717 chrX 20278749 20280484 + 5.25933468598717 NA intron (NM_177353, intron 1 of 16) intron (NM_177353, intron 1 of 16) 12148 NM_177353 236727 Mm.132983 NM_177353 ENSMUSG00000037341 Slc9a7 A530087D17Rik|NHE7 solute carrier family 9 (sodium/hydrogen exchanger), member 7 protein-coding common_peak1_126_1223_-0.295177148518606_10.1097992684333_5.25913898937918 chr6 128759958 128760817 + 5.25913898937918 NA Intergenic CpG 28254 NM_008527 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak1_124_778_0.328641260953034_9.76980014853819_5.25818650480011 chr8 31167745 31169346 + 5.25818650480011 NA intron (NM_026453, intron 1 of 9) CpG 179 NM_026453 67920 Mm.289818 NM_026453 ENSMUSG00000031578 Mak16 2600016B03Rik|AI314911|Rbm13 MAK16 homolog protein-coding common_peak2_145_1428_-0.27185886352383_10.3448607693339_5.25774768148539 chr16 93245249 93248079 + 5.25774768148539 NA Intergenic Intergenic 106525 NR_040486 69857 Mm.81192 NR_040486 ENSMUSG00000100277 1810053B23Rik 1810008L18Rik|1810056K14Rik RIKEN cDNA 1810053B23 gene ncRNA common_peak1_58_535_-0.460562785415947_8.8358077977498_5.25714332293348 chr17 66101678 66102387 + 5.25714332293348 NA promoter-TSS (NM_028388) promoter-TSS (NM_028388) -473 NM_028388 72900 Mm.2206 NM_028388 ENSMUSG00000024099 Ndufv2 2900010C23Rik NADH dehydrogenase (ubiquinone) flavoprotein 2 protein-coding common_peak2_35_322_-0.604092681634901_8.03334401387647_5.25680962993349 chr18 23988950 23990153 + 5.25680962993349 NA promoter-TSS (NM_011755) promoter-TSS (NM_011755) -83 NM_011755 22694 Mm.290596 NM_011755 ENSMUSG00000063281 Zfp35 Zfp-35|Znf271|mszf13|mszf20-1|mszf28|mszf68 zinc finger protein 35 protein-coding common_peak1_47_431_-0.514499722885017_8.49763764072096_5.25660361775018 chr17 29170564 29171278 + 5.25660361775018 NA intron (NM_153166, intron 12 of 20) intron (NM_153166, intron 12 of 20) 35865 NM_001002786 442827 Mm.440341 NM_001002786 ENSMUSG00000064147 Rab44 9830134C10Rik RAB44, member RAS oncogene family protein-coding common_peak2_47_431_-0.514499722885017_8.49763764072096_5.25660361775018 chr2 94436951 94438287 + 5.25660361775018 NA intron (NM_001305258, intron 1 of 13) CpG 567 NM_007466 11800 Mm.181824 NM_007466 ENSMUSG00000027193 Api5 AAC-11|AI196452|API-5 apoptosis inhibitor 5 protein-coding common_peak1_216_1639_0.23073821449433_10.7948492067526_5.25658467006077 chr12 105684220 105686087 + 5.25658467006077 NA promoter-TSS (NM_029654) promoter-TSS (NM_029654) 88 NM_029654 76559 Mm.114362 NM_029654 ENSMUSG00000041341 Atg2b 2410024A21Rik|AI047755|AI503411|AW558123|C030004M05Rik|C630028L02Rik|mKIAA4067 autophagy related 2B protein-coding common_peak1_142_1395_-0.274892879627226_10.309636786396_5.25630132535297 chr10 58497164 58498754 + 5.25630132535297 NA promoter-TSS (NM_001162956) promoter-TSS (NM_001162956) 22 NM_001162956 76138 Mm.211744 NM_001162956 ENSMUSG00000038010 Ccdc138 6230424H07Rik|BC042726 coiled-coil domain containing 138 protein-coding common_peak2_36_131_0.735389531852957_7.41208888528493_5.2552901060076 chr1 86586813 86587663 + 5.2552901060076 NA intron (NM_172974, intron 1 of 6) CpG 138 NM_172974 26895 Mm.12973 NM_172974 ENSMUSG00000026240 Cops7b D1Wsu66e|E130114M23 COP9 signalosome subunit 7B protein-coding common_peak2_215_2221_-0.215598600990429_11.0098438008939_5.25502127890652 chr2 181495606 181498176 + 5.25502127890652 NA promoter-TSS (NM_025482) promoter-TSS (NM_025482) -251 NM_001291203 66314 Mm.136648 NM_025482 ENSMUSG00000000827 Tpd52l2 2810411G23Rik|AU016537|C86069|D54 tumor protein D52-like 2 protein-coding common_peak2_187_1354_0.252278573557497_10.53021642302_5.25318156861757 chr2 152104601 152106464 + 5.25318156861757 NA promoter-TSS (NM_029688) promoter-TSS (NM_029688) 8 NM_029688 76650 Mm.218639 NM_029688 ENSMUSG00000032802 Srxn1 1700127B04Rik|AI854065|AW488194|Npn3|Srx|Srx1|TX01 sulfiredoxin 1 homolog (S. cerevisiae) protein-coding common_peak1_51_469_-0.494483390737711_8.62927525119614_5.25291680349663-2 chr13 52792890 52793676 + 5.25291680349663 NA Intergenic Intergenic -36078 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak1_51_469_-0.494483390737711_8.62927525119614_5.25291680349663 chr1 127308145 127309128 + 5.25291680349663 NA intron (NM_145128, intron 3 of 17) intron (NM_145128, intron 3 of 17) 103650 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_49_450_-0.504356119932639_8.56480556328906_5.25210503535453 chr2 31255855 31256739 + 5.25210503535453 NA intron (NM_019681, intron 1 of 7) intron (NM_019681, intron 1 of 7) 10374 NM_019681 14299 Mm.249318 NM_019681 ENSMUSG00000062661 Ncs1 9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1 neuronal calcium sensor 1 protein-coding common_peak2_49_450_-0.504356119932639_8.56480556328906_5.25210503535453 chr1 171110984 171112322 + 5.25210503535453 NA Intergenic Intergenic -10008 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak2_112_1074_-0.314601446304422_9.91282022132461_5.25202175748196 chr9 106371177 106373829 + 5.25202175748196 NA intron (NM_153459, intron 2 of 2) intron (NM_153459, intron 2 of 2) 3871 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding common_peak1_16_159_-0.918391833913191_6.86273217793077_5.251982763692 chr5 86803623 86804083 + 5.251982763692 NA promoter-TSS (NM_177680) promoter-TSS (NM_177680) -637 NM_177680 231386 Mm.196325 NM_177680 ENSMUSG00000035851 Ythdc1 A730098D12Rik|C80342|mKIAA1966 YTH domain containing 1 protein-coding common_peak1_16_159_-0.918391833913191_6.86273217793077_5.251982763692-2 chr5 134184808 134185252 + 5.251982763692 NA intron (NM_053266, intron 1 of 15) AT_rich|Low_complexity|Low_complexity 992 NM_053266 114674 Mm.218744 NM_053266 ENSMUSG00000015942 Gtf2ird2 1700012P16Rik GTF2I repeat domain containing 2 protein-coding unique_peak2_16_159_-0.918391833913191_6.86273217793077_5.251982763692 chr6 108557544 108558913 + 5.251982763692 NA Intergenic (TC)n|Simple_repeat|Simple_repeat 64939 NR_040757 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_321_2757_0.179202483031357_11.5190079830297_5.25119807670713 chr9 92249599 92252105 + 5.25119807670713 NA intron (NM_011636, intron 1 of 8) intron (NM_011636, intron 1 of 8) 658 NM_011636 22038 Mm.421956 NM_011636 ENSMUSG00000032369 Plscr1 MmTRA1a|MmTRA1b|Nor1|Tra1|Tra1a|Tra1b|Tras1|Tras2 phospholipid scramblase 1 protein-coding common_peak1_146_972_0.294714758282856_10.0736533739225_5.25056864481912 chr1 143738741 143740256 + 5.25056864481912 NA promoter-TSS (NM_001038594) promoter-TSS (NM_001038594) -70 NM_001038592 69367 Mm.272727 NM_023505 ENSMUSG00000018196 Glrx2 1700010P22Rik|AI645710|Grx2 glutaredoxin 2 (thioltransferase) protein-coding common_peak1_82_439_0.428146155643688_8.9954327913465_5.2496463841827 chr19 9135094 9135856 + 5.2496463841827 NA promoter-TSS (NM_025610) promoter-TSS (NM_025610) 91 NM_025610 66514 Mm.272847 NM_025610 ENSMUSG00000024654 Asrgl1 2410004D18Rik|ALP|ALP1|AU040643|AW060375 asparaginase like 1 protein-coding common_peak1_83_778_-0.374780251890458_9.41808939211644_5.24795509142155 chr3 60515894 60517510 + 5.24795509142155 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 15523 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_139_909_0.304947601810188_9.98219653599115_5.24762408411301 chr19 28989539 28991414 + 5.24762408411301 NA 5' UTR (NM_025950, exon 1 of 7) 5' UTR (NM_025950, exon 1 of 7) 124 NM_025950 67072 Mm.78875 NM_025950 ENSMUSG00000024780 Cdc37l1 2700033A15Rik|BB159850|Cdc37l|Harc cell division cycle 37-like 1 protein-coding common_peak2_160_1592_-0.25553363816633_10.5097637324421_5.24736534885888 chr9 114024867 114027391 + 5.24736534885888 NA intron (NM_178624, intron 1 of 14) intron (NM_178624, intron 1 of 14) 622 NM_178624 72179 Mm.386808 NM_178624 ENSMUSG00000032507 Fbxl2 2810423A21Rik|Fbl3 F-box and leucine-rich repeat protein 2 protein-coding common_peak2_131_839_0.316299052367468_9.87239504384986_5.24709566592648 chr16 4725752 4727245 + 5.24709566592648 NA intron (NM_001136066, intron 1 of 5) CpG 137 NM_001136066 15369 Mm.272866 NM_010443 ENSMUSG00000004070 Hmox2 HO-2|HO2 heme oxygenase 2 protein-coding common_peak2_71_659_-0.408412230000437_9.1621160992456_5.24706219945051 chr10 127029877 127031096 + 5.24706219945051 NA exon (NM_025537, exon 2 of 6) exon (NM_025537, exon 2 of 6) 328 NM_025537 66399 Mm.29900 NM_025537 ENSMUSG00000040521 Tsfm 2310050B20Rik|9430024O13Rik|EF-TS|EF-Tsmt Ts translation elongation factor, mitochondrial protein-coding common_peak1_261_2104_0.20409505507947_11.1416520454935_5.24557406355902 chr9 78480045 78481724 + 5.24557406355902 NA intron (NM_010106, intron 1 of 7) CpG 840 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak1_93_524_0.39356978605889_9.23295850558293_5.24542601847957 chr12 110737983 110739078 + 5.24542601847957 NA intron (NM_027149, intron 1 of 2) CpG 581 NM_027149 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding unique_peak2_13_134_-1.01686315821926_6.5683840179412_5.24470634444558 chr9 13445551 13446523 + 5.24470634444558 NA Intergenic Intergenic 14676 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA common_peak1_28_88_0.872929883546171_6.91219837273948_5.24250948264268 chr12 75732972 75733802 + 5.24250948264268 NA intron (NM_030750, intron 1 of 2) intron (NM_030750, intron 1 of 2) 2342 NM_030750 81535 Mm.280199 NM_030750 ENSMUSG00000021054 Sgpp1 AI463453|SPP|SPP1|Spph1 sphingosine-1-phosphate phosphatase 1 protein-coding common_peak1_28_88_0.872929883546171_6.91219837273948_5.24250948264268-3 chr7 120883984 120884585 + 5.24250948264268 NA intron (NM_001267711, intron 6 of 17) MLT1J|LTR|ERVL-MaLR 33095 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak1_28_88_0.872929883546171_6.91219837273948_5.24250948264268-2 chr2 173659065 173659543 + 5.24250948264268 NA promoter-TSS (NM_024436) promoter-TSS (NM_024436) 235 NR_027957 100043911 Mm.260590 NM_001033179 ENSMUSG00000055897 Ppp4r1l-ps 1700007P14Rik|5830403E09Rik|C030010B13Rik|Ppp4r1l protein phosphatase 4, regulatory subunit 1-like, pseudogene pseudo unique_peak2_8_93_-1.27651580099133_5.91633095118197_5.24166439368678 chr10 117937860 117938732 + 5.24166439368678 NA intron (NR_045342, intron 3 of 3) AT_rich|Low_complexity|Low_complexity 12837 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_54_496_-0.475811023176371_8.7191965299741_5.24155740233369 chrX 20961598 20962527 + 5.24155740233369 NA promoter-TSS (NR_027446) promoter-TSS (NR_027446) -52 NR_027446 320742 Mm.391227 NR_027445 A230072C01Rik - RIKEN cDNA A230072C01 gene ncRNA common_peak1_58_268_0.534064042485202_8.33849438379922_5.24145068463106 chr12 25139788 25141009 + 5.24145068463106 NA Intergenic Intergenic 11224 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_38_142_0.713072112829471_7.51640739319313_5.23913420888792 chr3 27461959 27462555 + 5.23913420888792 NA intron (NM_173182, intron 16 of 25) intron (NM_173182, intron 16 of 25) 90906 NM_177330 208188 Mm.194721 NM_177330 ENSMUSG00000051136 Ghsr C530020I22Rik|Ghsr1a growth hormone secretagogue receptor protein-coding common_peak2_47_196_0.618335959822075_7.93121979936741_5.23804190091616 chr11 96823395 96824816 + 5.23804190091616 NA promoter-TSS (NM_001130454) promoter-TSS (NM_001130454) 22 NM_001130452 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak2_160_1099_0.278709104946957_10.2426423608855_5.23759905129302 chr2 31687819 31689281 + 5.23759905129302 NA promoter-TSS (NM_001283046) promoter-TSS (NM_001283046) 13 NM_001283046 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak2_213_1610_0.231841951835561_10.7696617546243_5.23738869115949 chr4 41134588 41136921 + 5.23738869115949 NA promoter-TSS (NM_026275) promoter-TSS (NM_026275) -267 NM_026275 67615 Mm.389540 NM_026275 ENSMUSG00000036241 Ube2r2 1200003M11Rik|Cdc34b|Ubc3b ubiquitin-conjugating enzyme E2R 2 protein-coding common_peak1_353_3120_0.168480590462252_11.6920329371503_5.23598937553722 chr5 113770860 113773390 + 5.23598937553722 NA promoter-TSS (NM_016926) promoter-TSS (NM_016926) -476 NM_016926 53890 Mm.29594 NM_016926 ENSMUSG00000018974 Sart3 AU045857|mKIAA0156 squamous cell carcinoma antigen recognized by T cells 3 protein-coding common_peak2_318_3473_-0.17033731106997_11.6772133831754_5.23590289655446 chr1 138141493 138152543 + 5.23590289655446 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 28108 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_43_172_0.651781826243583_7.76051914075852_5.2339441049809 chr7 101457825 101458649 + 5.2339441049809 NA intron (NM_001008548, intron 2 of 30) intron (NM_001008548, intron 2 of 30) 6985 NM_001243757 207728 Mm.247564 NM_001008548 ENSMUSG00000030653 Pde2a CGS-PDE|cGSPDE phosphodiesterase 2A, cGMP-stimulated protein-coding common_peak2_52_477_-0.485125042537636_8.65830428671193_5.23387408423466 chr19 20409139 20410784 + 5.23387408423466 NA intron (NR_045817, intron 1 of 2) intron (NR_045817, intron 1 of 2) 4673 NR_045817 68994 Mm.261028 NM_183277 ENSMUSG00000094732 1500015L24Rik - RIKEN cDNA 1500015L24 gene ncRNA common_peak1_52_477_-0.485125042537636_8.65830428671193_5.23387408423466 chr6 87887841 87888560 + 5.23387408423466 NA intron (NM_017477, intron 1 of 23) intron (NM_017477, intron 1 of 23) 228 NM_201244 54161 Mm.258785 NM_017477 ENSMUSG00000030058 Copg1 AU019265|BC056168|Copg|D6Ertd71e|D6Wsu16e coatomer protein complex, subunit gamma 1 protein-coding common_peak2_35_125_0.754017749559106_7.35428879827947_5.23381608368693 chr12 112688375 112689261 + 5.23381608368693 NA Intergenic Intergenic 9978 NM_001100460 382639 Mm.11350 NM_001100460 ENSMUSG00000037638 Zbtb42 EG382639|Gm5188|simiRP58 zinc finger and BTB domain containing 42 protein-coding common_peak1_35_125_0.754017749559106_7.35428879827947_5.23381608368693 chr17 84891437 84892058 + 5.23381608368693 NA Intergenic MER20|DNA|hAT-Charlie -64994 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding unique_peak2_5_69_-1.56873217122558_5.34491693133218_5.23356243884744 chr14 121826268 121826856 + 5.23356243884744 NA Intergenic B2_Mm1a|SINE|B2 -28828 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak1_259_2083_0.204999580427101_11.1276393524921_5.23208671663989 chr17 63498728 63500919 + 5.23208671663989 NA exon (NM_015794, exon 1 of 9) exon (NM_015794, exon 1 of 9) 757 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding common_peak1_49_209_0.598381985656618_8.01343651049443_5.23204144582979 chr7 27258734 27259391 + 5.23204144582979 NA intron (NM_010950, intron 1 of 9) intron (NM_010950, intron 1 of 9) 301 NM_010950 18223 Mm.458153 NM_010950 ENSMUSG00000063160 Numbl nbl numb-like protein-coding common_peak1_31_287_-0.647059427130788_7.84639528787692_5.23189449209961 chr9 45292574 45293116 + 5.23189449209961 NA Intergenic Intergenic -23699 NM_008348 16154 Mm.379327 NM_008348 ENSMUSG00000032089 Il10ra AW553859|CDw210|CDw210a|IL-10R1|IL-10RA|Il10r|mIL-10R interleukin 10 receptor, alpha protein-coding common_peak2_218_1660_0.228617184576537_10.8121449502506_5.23182430549492 chr18 60773514 60776018 + 5.23182430549492 NA intron (NM_020600, intron 1 of 4) CpG 170 NM_020600 20044 Mm.43778 NM_020600 ENSMUSG00000024608 Rps14 2600014J02Rik|AL023078 ribosomal protein S14 protein-coding common_peak1_673_7147_0.112471207288495_12.8595595226857_5.23004437836042 chr2 129181365 129187187 + 5.23004437836042 NA Intergenic Intergenic -3603 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 OTTMUSG00000015420 expressed sequence AI847159 ncRNA common_peak1_42_385_-0.546729867014129_8.31909210376102_5.22850651255638 chr17 26716396 26716948 + 5.22850651255638 NA intron (NM_029870, intron 1 of 8) intron (NM_029870, intron 1 of 8) 1022 NM_029870 77128 Mm.275414 NM_029870 ENSMUSG00000048249 Crebrf A930001N09Rik|LRF CREB3 regulatory factor protein-coding common_peak1_42_385_-0.546729867014129_8.31909210376102_5.22850651255638-2 chr2 73346496 73347412 + 5.22850651255638 NA intron (NM_001276443, intron 16 of 16) intron (NM_001276443, intron 16 of 16) 34302 NM_029022 74616 Mm.247457 NM_029022 ENSMUSG00000008226 Scrn3 4833415E20Rik|AI427019|AV002033|Ses3 secernin 3 protein-coding common_peak1_18_175_-0.859067415240407_7.02989791101709_5.22696366289213 chr9 89221160 89221615 + 5.22696366289213 NA intron (NM_026829, intron 2 of 2) ID_B1|SINE|B4 10197 NM_026829 107885 Mm.486274 NM_026829 ENSMUSG00000066442 Mthfs 1110034I12Rik|2310020H23Rik|AI119695 5, 10-methenyltetrahydrofolate synthetase protein-coding common_peak2_75_387_0.453675983582476_8.82675083397837_5.22631882903664 chr4 144905799 144908079 + 5.22631882903664 NA intron (NM_011303, intron 1 of 5) intron (NM_011303, intron 1 of 5) 13802 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_19_183_-0.832427728426237_7.10734809184389_5.22570684595772 chr10 41888494 41888995 + 5.22570684595772 NA intron (NM_001013370, intron 1 of 9) intron (NM_001013370, intron 1 of 9) 1305 NM_001013370 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding common_peak1_19_183_-0.832427728426237_7.10734809184389_5.22570684595772-2 chr13 113085798 113086309 + 5.22570684595772 NA intron (NM_001281487, intron 11 of 11) Lx8|LINE|L1 14928 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak2_122_1179_-0.298993363030494_10.055074462734_5.22551674307286 chr4 119107783 119109867 + 5.22551674307286 NA promoter-TSS (NM_011400) promoter-TSS (NM_011400) 80 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak2_104_612_0.365836966986038_9.4426617471838_5.22164127894052 chr5 139319810 139321696 + 5.22164127894052 NA intron (NM_172723, intron 1 of 10) intron (NM_172723, intron 1 of 10) 4711 NM_172723 231821 Mm.297819 NM_172723 ENSMUSG00000056413 Adap1 4930431P11Rik|Centa1|GC1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding common_peak2_104_612_0.365836966986038_9.4426617471838_5.22164127894052-2 chr7 58827310 58830183 + 5.22164127894052 NA 3' UTR (NM_009728, exon 21 of 21) 3' UTR (NM_009728, exon 21 of 21) 170544 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_226_2349_-0.208500294464631_11.09419489422_5.22118095058616 chr11 69394507 69396969 + 5.22118095058616 NA promoter-TSS (NM_001045525) promoter-TSS (NM_001045525) -53 NM_030083 78304 Mm.45683 NM_030083 ENSMUSG00000059278 Naa38 1500034E06Rik|Lsmd1 N(alpha)-acetyltransferase 38, NatC auxiliary subunit protein-coding common_peak2_426_3979_0.149502844881431_12.0333041378717_5.22090173638481 chr1 193197889 193202881 + 5.22090173638481 NA intron (NM_153137, intron 2 of 15) intron (NM_153137, intron 2 of 15) 1161 NM_153137 215243 Mm.261259 NM_153137 ENSMUSG00000037318 Traf3ip3 6030423D04Rik|AI115021|T3jam TRAF3 interacting protein 3 protein-coding unique_peak1_11_16_1.6997003156554_4.93731299907804_5.22068457343052 chr12 51861618 51861970 + 5.22068457343052 NA Intergenic Intergenic -32258 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak1_86_807_-0.365413652085943_9.47550465670883_5.22025138960874 chr8 70806083 70807683 + 5.22025138960874 NA Intergenic Intergenic -1566 NM_008353 16161 Mm.731 NM_008353 ENSMUSG00000000791 Il12rb1 CD212|IL-12R[b] interleukin 12 receptor, beta 1 protein-coding common_peak2_54_241_0.562427781111321_8.20007712783026_5.21831979025128 chr11 29246497 29247419 + 5.21831979025128 NA intron (NM_025740, intron 1 of 9) intron (NM_025740, intron 1 of 9) 314 NM_025740 216618 Mm.128663 NM_025740 ENSMUSG00000020462 Cfap36 2300003H10|4931428D14Rik|Ccdc104 cilia and flagella associated protein 36 protein-coding common_peak1_54_241_0.562427781111321_8.20007712783026_5.21831979025128 chr3 14893894 14894798 + 5.21831979025128 NA intron (NM_009801, intron 2 of 6) intron (NM_009801, intron 2 of 6) 7920 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding common_peak2_50_459_-0.497819273816919_8.59658041403592_5.21785633061718 chr11 75913131 75914740 + 5.21785633061718 NA intron (NM_001291159, intron 1 of 4) MamRep4096|DNA|hAT? -2876 NM_029548 380714 Mm.425697 NM_029548 ENSMUSG00000020847 Rph3al Gm1753|Noc2 rabphilin 3A-like (without C2 domains) protein-coding common_peak1_50_459_-0.497819273816919_8.59658041403592_5.21785633061718 chr2 117373858 117375014 + 5.21785633061718 NA Intergenic Intergenic -31559 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak2_117_720_0.338283266987359_9.6629970827345_5.21738089539146 chr7 141167179 141169900 + 5.21738089539146 NA intron (NM_001172100, intron 1 of 9) CpG 147 NM_001172101 107702 Mm.197493 NM_145135 ENSMUSG00000038650 Rnh1 AW546468|C80305|RNH ribonuclease/angiogenin inhibitor 1 protein-coding common_peak1_73_678_-0.400871801846966_9.20683186332125_5.21626399074282 chr1 172632431 172633089 + 5.21626399074282 NA exon (NM_026725, exon 1 of 2) exon (NM_026725, exon 1 of 2) 214 NM_026725 68440 Mm.33024 NM_026725 ENSMUSG00000026544 Dusp23 1300005N15Rik|LDP-3 dual specificity phosphatase 23 protein-coding common_peak2_281_3012_-0.183107042828805_11.4654314361801_5.21613873361836 chr15 36606832 36610339 + 5.21613873361836 NA 5' UTR (NM_008774, exon 1 of 15) 5' UTR (NM_008774, exon 1 of 15) 388 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak2_68_337_0.481715883964611_8.64173737826449_5.21584245242692 chr17 84177003 84178359 + 5.21584245242692 NA Intergenic Intergenic 10266 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_92_868_-0.35239564592681_9.58701454385099_5.21515183596279 chr11 70614493 70615968 + 5.21515183596279 NA promoter-TSS (NM_001145537) promoter-TSS (NM_001145537) -664 NM_001145537 668433 Mm.425687 NM_001145537 ENSMUSG00000087279 4930544D05Rik - RIKEN cDNA 4930544D05 gene protein-coding common_peak1_23_217_-0.754408856684831_7.39097989643451_5.21491318683474-2 chr11 62678253 62678766 + 5.21491318683474 NA Intergenic Intergenic 29845 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding common_peak1_23_217_-0.754408856684831_7.39097989643451_5.21491318683474 chr10 81505031 81505457 + 5.21491318683474 NA intron (NM_010304, intron 6 of 6) ORR1C2|LTR|ERVL-MaLR -5107 NM_010102 13611 Mm.33065 NM_010102 ENSMUSG00000044199 S1pr4 Edg6|Lpc1|S1p4 sphingosine-1-phosphate receptor 4 protein-coding common_peak2_150_1008_0.289809925879194_10.123615422046_5.21473959249314 chr1 151754219 151756683 + 5.21473959249314 NA promoter-TSS (NM_001039644) promoter-TSS (NM_001039644) 77 NM_001311166 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding common_peak1_60_553_-0.449222715002216_8.88913080854808_5.21331880459444 chr12 25319115 25320226 + 5.21331880459444 NA Intergenic ORR1A2|LTR|ERVL-MaLR 190496 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_792_8791_0.101548695172575_13.1527500185355_5.21316765580883 chr9 57636105 57647717 + 5.21316765580883 NA intron (NM_001304761, intron 2 of 14) intron (NM_001304761, intron 2 of 14) 3742 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak2_178_1269_0.25893180376324_10.4400786835411_5.21283372872962 chr6 56714204 56715950 + 5.21283372872962 NA 5' UTR (NM_030235, exon 1 of 16) 5' UTR (NM_030235, exon 1 of 16) 172 NM_030235 78937 Mm.105343 NM_030235 ENSMUSG00000029787 Avl9 5830411G16Rik|D730049P16Rik|mKIAA0241 AVL9 cell migration associated protein-coding common_peak1_178_1269_0.25893180376324_10.4400786835411_5.21283372872962 chr6 56714284 56716009 + 5.21283372872962 NA exon (NM_030235, exon 1 of 16) exon (NM_030235, exon 1 of 16) 241 NM_030235 78937 Mm.105343 NM_030235 ENSMUSG00000029787 Avl9 5830411G16Rik|D730049P16Rik|mKIAA0241 AVL9 cell migration associated protein-coding common_peak1_235_2455_-0.203343817955639_11.1604229363924_5.21236703874707 chr6 30302827 30304635 + 5.21236703874707 NA intron (NM_009459, intron 1 of 6) intron (NM_009459, intron 1 of 6) 808 NM_009459 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak2_46_422_-0.521382765693932_8.46382247027298_5.21165129231027 chr2 167633731 167635368 + 5.21165129231027 NA Intergenic Intergenic -2544 NM_023230 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding unique_peak2_24_226_-0.740533295154531_7.45628183971365_5.21118467868139 chr17 47139856 47141170 + 5.21118467868139 NA promoter-TSS (NM_001097623) promoter-TSS (NM_001097623) -429 NM_001097623 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak2_24_226_-0.740533295154531_7.45628183971365_5.21118467868139 chrX 102157261 102158070 + 5.21118467868139 NA promoter-TSS (NM_146235) promoter-TSS (NM_146235) -574 NM_146235 236930 Mm.31911 NM_146235 ENSMUSG00000051220 Ercc6l BC004701|D330021P09Rik excision repair cross-complementing rodent repair deficiency complementation group 6 like protein-coding common_peak1_77_718_-0.39029219964508_9.29470186061676_5.21063151367966 chr11 21174648 21175622 + 5.21063151367966 NA Intergenic Intergenic -63897 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak1_30_278_-0.657439107094881_7.79540175828175_5.21021395505423 chr8 70438981 70439639 + 5.21021395505423 NA intron (NM_001004062, intron 1 of 13) intron (NM_001004062, intron 1 of 13) 263 NM_001004062 382056 Mm.227767 NM_001004062 ENSMUSG00000003575 Crtc1 AI413414|Mect1|R74955|TORC1|mKIAA0616 CREB regulated transcription coactivator 1 protein-coding common_peak2_65_316_0.495593228707829_8.55613564449332_5.20927517509934 chr17 6270195 6271463 + 5.20927517509934 NA intron (NM_001033178, intron 1 of 16) CpG 359 NM_001033178 77106 Mm.381893 NM_001033178 ENSMUSG00000038141 Tmem181a 5930418K15Rik|C76977|Gpr178|Tmem181|mKIAA1423 transmembrane protein 181A protein-coding unique_peak2_21_200_-0.791253948484977_7.25542471693644_5.20851640118517 chr6 130100524 130101807 + 5.20851640118517 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) 28670 NM_010650 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding common_peak1_249_2622_-0.196269002063923_11.258867591233_5.20791785555626 chr12 21285373 21288261 + 5.20791785555626 NA promoter-TSS (NM_008403) promoter-TSS (NM_008403) 520 NM_018813 54451 Mm.356778 NM_018813 ENSMUSG00000054309 Cpsf3 - cleavage and polyadenylation specificity factor 3 protein-coding common_peak1_112_1073_-0.313258779813012_9.91214888807891_5.20743143510684 chr17 73004705 73006075 + 5.20743143510684 NA Intergenic Intergenic 87085 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_267_2840_-0.188414793667105_11.377975719356_5.2072671343911 chr6 134897466 134899004 + 5.2072671343911 NA promoter-TSS (NM_001167695) promoter-TSS (NM_001167695) 274 NR_029441 72813 Mm.409034 NR_029441 ENSMUSG00000100876 2810454H06Rik - RIKEN cDNA 2810454H06 gene ncRNA common_peak2_52_228_0.576537977346169_8.12747277677003_5.20660630221906 chr17 34893761 34895190 + 5.20660630221906 NA promoter-TSS (NM_198886) promoter-TSS (NM_198886) -84 NM_198886 193736 Mm.161119 NM_198886 ENSMUSG00000049823 Zbtb12 BC020447|Bat-9|Bat9|G10|NG35 zinc finger and BTB domain containing 12 protein-coding common_peak1_52_228_0.576537977346169_8.12747277677003_5.20660630221906 chr11 88973748 88974657 + 5.20660630221906 NA exon (NM_016706, exon 1 of 7) exon (NM_016706, exon 1 of 7) 267 NM_016706 12812 Mm.268004 NM_016706 ENSMUSG00000033983 Coil C79982|Cln80|p80|p80-coilin coilin protein-coding common_peak2_528_5243_0.130665619585521_12.4217847800145_5.20560480086914 chr4 150923092 150929415 + 5.20560480086914 NA intron (NM_011612, intron 1 of 7) intron (NM_011612, intron 1 of 7) -1746 NM_001077509 21942 Mm.244187 NM_011612 ENSMUSG00000028965 Tnfrsf9 4-1BB|A930040I11Rik|AA408498|AI325004|CDw137|Cd137|ILA|Ly63 tumor necrosis factor receptor superfamily, member 9 protein-coding common_peak1_26_78_0.918426818662492_6.76299415750835_5.20510243183508-4 chr5 115313498 115314117 + 5.20510243183508 NA intron (NR_131932, intron 1 of 1) intron (NR_131932, intron 1 of 1) 12687 NR_131932 102639268 Mm.319998 NR_131932 Gm13830 OTTMUSG00000014646 predicted gene 13830 ncRNA common_peak1_26_78_0.918426818662492_6.76299415750835_5.20510243183508-3 chr2 177205959 177206436 + 5.20510243183508 NA Intergenic RMER17B|LTR|ERVK -258545 NM_001177568 628308 Mm.460436 NM_001177568 ENSMUSG00000078866 Zfp970 Gm14420|OTTMUSG00000016588 zinc finger protein 970 protein-coding unique_peak2_26_78_0.918426818662492_6.76299415750835_5.20510243183508 chr17 31219595 31220328 + 5.20510243183508 NA intron (NM_177823, intron 6 of 13) intron (NM_177823, intron 6 of 13) 11895 NM_177823 328795 Mm.387930 NM_177823 ENSMUSG00000042345 Ubash3a 5830413C03Rik|C330001M22|Sts-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing, A protein-coding common_peak1_26_78_0.918426818662492_6.76299415750835_5.20510243183508 chr15 96729079 96729575 + 5.20510243183508 NA Intergenic Intergenic -29629 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_26_78_0.918426818662492_6.76299415750835_5.20510243183508-2 chr2 118303971 118304502 + 5.20510243183508 NA promoter-TSS (NR_045919) promoter-TSS (NR_045919) -678 NR_045919 73358 Mm.437192 NR_045919 ENSMUSG00000085889 1700054M17Rik - RIKEN cDNA 1700054M17 gene ncRNA unique_peak1_16_34_1.27425324402921_5.76640963895957_5.20440293911814 chr10 128194811 128195222 + 5.20440293911814 NA intron (NM_001033264, intron 1 of 17) CpG 381 NM_001285779 216456 Mm.30102 NM_001033264 ENSMUSG00000044005 Gls2 A330074B06Rik|AI195532|GA|GLS|Lga glutaminase 2 (liver, mitochondrial) protein-coding common_peak1_16_34_1.27425324402921_5.76640963895957_5.20440293911814-3 chr5 32149510 32149886 + 5.20440293911814 NA intron (NM_008037, intron 2 of 3) intron (NM_008037, intron 2 of 3) 13226 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding unique_peak1_16_34_1.27425324402921_5.76640963895957_5.20440293911814-2 chr4 139330897 139331305 + 5.20440293911814 NA Intergenic Intergenic 20357 NM_025337 110198 Mm.482154 NM_025337 ENSMUSG00000028743 Akr7a5 0610025K21Rik|Afar|Afar1|Akr7a2 aldo-keto reductase family 7, member A5 (aflatoxin aldehyde reductase) protein-coding common_peak1_16_34_1.27425324402921_5.76640963895957_5.20440293911814-2 chr17 33780199 33780573 + 5.20440293911814 NA intron (NM_020581, intron 3 of 6) intron (NM_020581, intron 3 of 6) 1189 NM_020581 57875 Mm.196189 NM_020581 ENSMUSG00000002289 Angptl4 Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158 angiopoietin-like 4 protein-coding common_peak1_16_34_1.27425324402921_5.76640963895957_5.20440293911814 chr10 116912761 116913174 + 5.20440293911814 NA intron (NM_001003950, intron 7 of 9) intron (NM_001003950, intron 7 of 9) -16088 NM_001033333 237558 Mm.336386 NM_001033333 ENSMUSG00000034057 Myrfl Gm239 myelin regulatory factor-like protein-coding unique_peak2_7_85_-1.35662380276329_5.74795285332045_5.20440293911813-2 chr2 164006615 164007234 + 5.20440293911813 NA intron (NM_018753, intron 1 of 5) intron (NM_018753, intron 1 of 5) 11727 NM_018753 54401 Mm.34319 NM_018753 ENSMUSG00000018326 Ywhab 1300003C17Rik|14-3-3b tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide protein-coding unique_peak2_7_85_-1.35662380276329_5.74795285332045_5.20440293911813 chr2 128502172 128502937 + 5.20440293911813 NA Intergenic B1F|SINE|Alu -73203 NR_028590 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_185_1336_0.252645281980593_10.5111063910837_5.20400656567332 chr16 30586840 30588588 + 5.20400656567332 NA promoter-TSS (NM_178069) promoter-TSS (NM_178069) -125 NM_178069 224092 Mm.567 NM_178069 ENSMUSG00000022538 Lsg1 5830465I20|AA409273|D16Bwg1547e large 60S subunit nuclear export GTPase 1 protein-coding common_peak1_72_366_0.462682773542415_8.75097763961442_5.20305012874925 chr10 43479054 43480568 + 5.20305012874925 NA intron (NM_199028, intron 1 of 3) CpG 671 NM_199028 331623 Mm.490388 NM_199028 ENSMUSG00000038214 Bend3 mKIAA1553 BEN domain containing 3 protein-coding common_peak2_78_727_-0.38569554908538_9.31494686565601_5.20291436154335 chr14 61172421 61173971 + 5.20291436154335 NA intron (NM_172809, intron 2 of 9) CpG 34739 NM_172809 50720 Mm.440703 NM_015788 ENSMUSG00000048279 Sacs A230052M14|DNAJC29|E130115J16Rik|mKIAA0730 sacsin protein-coding common_peak1_200_1482_0.240375333848375_10.6544905493788_5.20160982751975 chr19 34582211 34583643 + 5.20160982751975 NA promoter-TSS (NM_010501) promoter-TSS (NM_010501) -602 NM_010501 15959 Mm.426079 NM_010501 ENSMUSG00000074896 Ifit3 Ifi49|P49 interferon-induced protein with tetratricopeptide repeats 3 protein-coding common_peak1_210_2160_-0.216884017720545_10.9690413479992_5.20080375538811 chr2 131261694 131263564 + 5.20080375538811 NA exon (NM_153501, exon 1 of 7) exon (NM_153501, exon 1 of 7) 129 NM_153501 74450 Mm.101264 NM_153501 ENSMUSG00000037514 Pank2 4933409I19Rik|AI642621 pantothenate kinase 2 protein-coding common_peak2_57_261_0.541852624161475_8.30434931361819_5.2003873394385 chr8 69270375 69271625 + 5.2003873394385 NA promoter-TSS (NM_172491) promoter-TSS (NM_172491) -80 NM_172491 211135 Mm.294970 NM_172491 ENSMUSG00000079038 D130040H23Rik - RIKEN cDNA D130040H23 gene protein-coding unique_peak2_57_261_0.541852624161475_8.30434931361819_5.2003873394385 chr1 180198753 180200264 + 5.2003873394385 NA Intergenic L2a|LINE|L2 -3488 NM_023341 67426 Mm.38330 NM_023341 ENSMUSG00000026489 Coq8a 4632432J16Rik|AI462003|Adck3|Cabc1|mKIAA0451 coenzyme Q8A protein-coding common_peak2_94_888_-0.347569818554557_9.62225469955249_5.20030981208687 chrX 166509663 166511282 + 5.20030981208687 NA promoter-TSS (NM_001007577) promoter-TSS (NM_001007577) 6 NM_001007577 245695 Mm.336318 NM_001007577 ENSMUSG00000051224 Tceanc A630018P17Rik|Gm390 transcription elongation factor A (SII) N-terminal and central domain containing protein-coding common_peak1_140_919_0.301775552634927_9.99637782726184_5.19925686733851 chr3 146812275 146813568 + 5.19925686733851 NA promoter-TSS (NM_011100) promoter-TSS (NM_011100) 25 NM_011100 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak2_128_814_0.319205437288792_9.83025896776284_5.19826834224784 chr3 138741762 138743668 + 5.19826834224784 NA intron (NR_121195, intron 1 of 7) CpG 507 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding common_peak1_69_344_0.477605474044358_8.66925528868771_5.19762216924906 chr14 25482952 25484253 + 5.19762216924906 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 24417 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak2_6_77_-1.45206209121703_5.55937117325373_5.1971155953312 chr5 23665480 23666047 + 5.1971155953312 NA Intergenic Intergenic 46904 NR_038090 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak1_20_192_-0.814982393469583_7.18496584053329_5.19702319161309-2 chr8 3621572 3621909 + 5.19702319161309 NA promoter-TSS (NM_026156) promoter-TSS (NM_026156) 189 NM_001195244 100503890 Mm.254898 NM_001195244 ENSMUSG00000087687 Pet100 2900053A13Rik PET100 homolog protein-coding unique_peak2_20_192_-0.814982393469583_7.18496584053329_5.19702319161309 chr14 67763375 67764918 + 5.19702319161309 NA intron (NM_177780, intron 47 of 51) intron (NM_177780, intron 47 of 51) 18965 NR_133010 14714 Mm.358309 NM_008145 ENSMUSG00000015812 Gnrh1 Gnrh|Gnrh2|LHRH|Lhrh1|Lnrh|hpg gonadotropin releasing hormone 1 protein-coding common_peak1_20_192_-0.814982393469583_7.18496584053329_5.19702319161309 chr4 46486396 46486814 + 5.19702319161309 NA Intergenic B1_Mus1|SINE|Alu -2724 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding unique_peak2_14_142_-0.977827215367041_6.67095772909487_5.19572387275217 chr9 111053679 111054753 + 5.19572387275217 NA TTS (NM_017466) TTS (NM_017466) 3028 NM_001302377 54199 Mm.7336 NM_017466 ENSMUSG00000043953 Ccrl2 1810047I05Rik|Ackr5|CCR11|Cmkbr1l2|E01|L-CCR chemokine (C-C motif) receptor-like 2 protein-coding common_peak1_83_777_-0.372927078814982_9.4171628055787_5.19563148891205 chr9 44235394 44237110 + 5.19563148891205 NA Intergenic B1_Mur4|SINE|Alu -2206 NM_007619 12402 Mm.266871 NM_007619 ENSMUSG00000034342 Cbl 4732447J05Rik|Cbl-2|c-Cbl|cbl Casitas B-lineage lymphoma protein-coding common_peak1_154_1525_-0.260751455221904_10.4451635192236_5.1952379397834 chr1 151427871 151429674 + 5.1952379397834 NA promoter-TSS (NM_025819) promoter-TSS (NM_025819) 124 NM_026876 98685 Mm.289373 NM_026876 ENSMUSG00000053286 Trmt1l 1190005F20Rik|AW226554|C1orf25|Trm1-like|Trm1l tRNA methyltransferase 1 like protein-coding common_peak2_420_3908_0.15042937456273_12.0077985565707_5.19443010767263 chr1 127301719 127310958 + 5.19443010767263 NA intron (NM_145128, intron 2 of 17) intron (NM_145128, intron 2 of 17) 101352 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_299_2515_0.186458123783092_11.3901452687708_5.19425834532968 chr6 72898656 72900767 + 5.19425834532968 NA 5' UTR (NM_019715, exon 1 of 7) 5' UTR (NM_019715, exon 1 of 7) 268 NM_019715 74287 Mm.29194 NM_019715 ENSMUSG00000055239 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 protein-coding unique_peak2_22_209_-0.775784713572612_7.32635316087982_5.19404727062196 chr11 118458929 118460023 + 5.19404727062196 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -4481 NR_045902 100126224 Mm.441989 NR_045902 ENSMUSG00000086514 Gm11747 OTTMUSG00000003972 predicted gene 11747 ncRNA common_peak2_421_4805_-0.143409282804548_12.1589162917276_5.19136195668383 chr15 102243041 102248482 + 5.19136195668383 NA intron (NM_011244, intron 3 of 9) intron (NM_011244, intron 3 of 9) 739 NM_001042727 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding common_peak1_150_1480_-0.263835540303296_10.4004381551372_5.19092998390946 chr7 45741212 45742591 + 5.19092998390946 NA intron (NM_017465, intron 2 of 6) intron (NM_017465, intron 2 of 6) -16085 NM_027055 69363 Mm.45607 NM_027055 ENSMUSG00000070563 Spaca4 1700008E09Rik|AV043694|Samp14 sperm acrosome associated 4 protein-coding common_peak1_89_837_-0.358015484948364_9.53179869122517_5.19064288667504 chr16 49790578 49791756 + 5.19064288667504 NA Intergenic Intergenic -64487 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_31_104_0.808620056645402_7.11855554598882_5.19057899305997 chr1 13588045 13588853 + 5.19057899305997 NA intron (NM_028173, intron 1 of 10) intron (NM_028173, intron 1 of 10) 1461 NM_028173 72265 Mm.28765 NM_028173 ENSMUSG00000025935 Tram1 1810049E02Rik|TRAMP translocating chain-associating membrane protein 1 protein-coding common_peak2_31_104_0.808620056645402_7.11855554598882_5.19057899305997 chr11 59843236 59844199 + 5.19057899305997 NA Intergenic Intergenic -3950 NM_011991 26572 Mm.40 NM_011991 ENSMUSG00000019373 Cops3 Csn3|Sgn3 COP9 signalosome subunit 3 protein-coding common_peak1_31_104_0.808620056645402_7.11855554598882_5.19057899305997-3 chrX 60403476 60404033 + 5.19057899305997 NA intron (NM_001001798, intron 1 of 28) CpG 227 NM_001001798 320940 Mm.490394 NM_001001798 ENSMUSG00000062949 Atp11c A330005H02Rik|AI315324|Ig ATPase, class VI, type 11C protein-coding common_peak1_31_104_0.808620056645402_7.11855554598882_5.19057899305997-2 chr8 124284334 124284894 + 5.19057899305997 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 53220 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_31_104_0.808620056645402_7.11855554598882_5.19057899305997-2 chr14 89898332 89899220 + 5.19057899305997 NA non-coding (NR_002862, exon 1 of 1) non-coding (NR_002862, exon 1 of 1) 2552 NR_002862 328451 Mm.320571 NR_002862 Gm5088 EG328451|Pabpc4l poly(A)-binding protein, cytoplasmic pseudogene pseudo common_peak1_64_591_-0.432538845296053_8.99318394298092_5.18970967035022 chr10 81182484 81183722 + 5.18970967035022 NA promoter-TSS (NM_007828) promoter-TSS (NM_007828) 96 NM_001190474 13144 Mm.10294 NM_007828 ENSMUSG00000034974 Dapk3 ZIPK|dlk death-associated protein kinase 3 protein-coding common_peak2_73_373_0.459501502510129_8.7766452111427_5.18882278708626 chr9 105052859 105054128 + 5.18882278708626 NA exon (NM_053159, exon 1 of 10) exon (NM_053159, exon 1 of 10) 225 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding common_peak2_44_178_0.642362860300375_7.80499720741444_5.18836770649849 chr1 72225581 72226655 + 5.18836770649849 NA Intergenic CpG -13811 NM_001005423 381269 Mm.422636 NM_001005423 ENSMUSG00000039395 Mreg Gm974|Wdt2|dsu melanoregulin protein-coding common_peak2_380_4266_-0.152661184873782_11.9826758027642_5.18820763010374 chr3 107331537 107335156 + 5.18820763010374 NA promoter-TSS (NM_001045807) promoter-TSS (NM_001045807) -57 NM_001045807 229700 Mm.27966 NM_001045807 ENSMUSG00000048109 Rbm15 C230088J01Rik|mKIAA1438 RNA binding motif protein 15 protein-coding common_peak1_96_908_-0.342798120830698_9.65673742377876_5.18723938389031 chr18 67307743 67309102 + 5.18723938389031 NA intron (NM_053261, intron 3 of 7) intron (NM_053261, intron 3 of 7) 19199 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak2_158_1082_0.279058753988071_10.2203469046024_5.18669999773367 chr2 5950290 5952269 + 5.18669999773367 NA promoter-TSS (NM_001081132) promoter-TSS (NM_001081132) -190 NM_001081132 326622 Mm.31102 NM_001081132 ENSMUSG00000043241 Upf2 - UPF2 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak2_147_1447_-0.266837613499082_10.3664270803337_5.18646679175327 chr8 83770284 83774576 + 5.18646679175327 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -31119 NM_001163031 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak1_63_302_0.506303902024928_8.49632593448542_5.18640815923687 chr19 34640099 34640974 + 5.18640815923687 NA promoter-TSS (NM_008331) promoter-TSS (NM_008331) 207 NM_053217 112419 Mm.440727 NM_053217 ENSMUSG00000067297 Ifit1bl2 2010002M12Rik|AW412491|Ifit1b interferon induced protein with tetratricopeptide repeats 1B like 2 protein-coding common_peak2_63_302_0.506303902024928_8.49632593448542_5.18640815923687 chr1 138347974 138349413 + 5.18640815923687 NA Intergenic Intergenic 74955 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_63_302_0.506303902024928_8.49632593448542_5.18640815923687-2 chr2 130283712 130284886 + 5.18640815923687 NA intron (NM_130884, intron 1 of 11) CpG-8539 152 NM_130884 170718 Mm.29590 NM_130884 ENSMUSG00000027406 Idh3b C78231 isocitrate dehydrogenase 3 (NAD+) beta protein-coding common_peak2_47_430_-0.511156279810647_8.49596591918377_5.18640815923678 chr6 129283697 129285645 + 5.18640815923678 NA Intergenic Intergenic -9302 NM_001033122 12515 Mm.74745 NM_001033122 ENSMUSG00000030156 Cd69 5830438K24Rik|AI452015|AIM|VEA CD69 antigen protein-coding common_peak1_34_120_0.762582477248939_7.30015447589906_5.18497731046836 chr4 101239484 101240295 + 5.18497731046836 NA intron (NM_146145, intron 1 of 24) RMER1A|Other|Other 25393 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_34_120_0.762582477248939_7.30015447589906_5.18497731046836-2 chr7 99128773 99129669 + 5.18497731046836 NA intron (NM_178635, intron 1 of 14) intron (NM_178635, intron 1 of 14) 11923 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak2_34_120_0.762582477248939_7.30015447589906_5.18497731046836-3 chr9 62372680 62373718 + 5.18497731046836 NA intron (NM_009672, intron 3 of 6) intron (NM_009672, intron 3 of 6) 31856 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak2_34_120_0.762582477248939_7.30015447589906_5.18497731046836 chr10 12836004 12837046 + 5.18497731046836 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 25210 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_294_2461_0.188016945435688_11.3596235192023_5.18417525177185 chr13 55692140 55694700 + 5.18417525177185 NA intron (NM_181278, intron 1 of 1) CpG 296 NM_181278 78521 Mm.28449 NM_181278 ENSMUSG00000045767 B230219D22Rik AA119856|D530037I19Rik RIKEN cDNA B230219D22 gene protein-coding common_peak2_470_4517_0.140141595165851_12.211539352976_5.18383094386537 chr4 152192976 152203997 + 5.18383094386537 NA intron (NM_001146057, intron 1 of 8) intron (NM_001146057, intron 1 of 8) -1358 NM_001146058 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak2_37_137_0.718452057805077_7.46775048568071_5.18363205236347 chr17 32536148 32537098 + 5.18363205236347 NA promoter-TSS (NM_024442) promoter-TSS (NM_024442) -6 NM_024442 70101 Mm.30504 NM_024442 ENSMUSG00000048440 Cyp4f16 2310021J05Rik|AI746515 cytochrome P450, family 4, subfamily f, polypeptide 16 protein-coding common_peak2_48_203_0.604450894939189_7.97465078944109_5.18303025393141 chr16 92779346 92780885 + 5.18303025393141 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 45959 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_12_125_-1.04847099004534_6.45304442847725_5.18207312629589-2 chr19 43520401 43521367 + 5.18207312629589 NA intron (NM_010324, intron 1 of 8) B4A|SINE|B4 3721 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_12_125_-1.04847099004534_6.45304442847725_5.18207312629589 chr11 53841296 53841689 + 5.18207312629589 NA intron (NR_033332, intron 2 of 3) B4A|SINE|B4 17764 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA unique_peak2_12_125_-1.04847099004534_6.45304442847725_5.18207312629589 chr13 101739715 101740726 + 5.18207312629589 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) 27997 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_90_847_-0.355575411843152_9.55013274864162_5.18185091806322 chr10 97313109 97314051 + 5.18185091806322 NA Intergenic Intergenic -109898 NR_039547 100628616 NR_039547 ENSMUSG00000105557 Mir3966 mmu-mir-3966|mu-mir-3966 microRNA 3966 ncRNA unique_peak2_38_348_-0.574139776601792_8.16001333790876_5.18139793324951 chr6 112332917 112335517 + 5.18139793324951 NA Intergenic Intergenic -43898 NR_045986 100503613 Mm.136719 NM_177012 5031434C07Rik - RIKEN cDNA 5031434C07 gene ncRNA common_peak1_45_412_-0.524924856139581_8.42753554334966_5.18120848686315 chr13 69534845 69535416 + 5.18120848686315 NA Intergenic CpG-3990 -1266 NM_001169131 210106 Mm.315959 NM_198600 ENSMUSG00000034575 Papd7 LAK-1|POLK|Pols|TRF4|TRF4-1 PAP associated domain containing 7 protein-coding common_peak1_60_282_0.51986120821509_8.40458884693943_5.18063968485191 chr2 125782269 125782937 + 5.18063968485191 NA exon (NM_177608, exon 1 of 18) exon (NM_177608, exon 1 of 18) 267 NM_177608 70354 Mm.138091 NM_133725 ENSMUSG00000035093 Secisbp2l 3110001I20Rik|AI504340|C630011I23 SECIS binding protein 2-like protein-coding common_peak2_55_248_0.553175129136201_8.23658949663618_5.18005882941105 chr19 29430298 29431932 + 5.18005882941105 NA intron (NM_021396, intron 2 of 5) intron (NM_021396, intron 2 of 5) 20196 NM_021396 58205 Mm.116737 NM_021396 ENSMUSG00000016498 Pdcd1lg2 B7-DC|Btdc|F730015O22Rik|PD-L2 programmed cell death 1 ligand 2 protein-coding common_peak2_247_1959_0.209881199290804_11.041578538648_5.17981169309104 chr1 160791025 160793764 + 5.17981169309104 NA intron (NM_013862, intron 1 of 20) CpG 544 NM_013862 29809 Mm.25833 NM_013862 ENSMUSG00000026721 Rabgap1l 5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471 RAB GTPase activating protein 1-like protein-coding common_peak1_221_1692_0.22516422065541_10.8379483682233_5.17830222394531 chr5 139790956 139792577 + 5.17830222394531 NA intron (NM_010757, intron 1 of 2) CpG 230 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak1_114_695_0.343622895123101_9.61475494341028_5.17625938032077 chr13 42049286 42050177 + 5.17625938032077 NA Intergenic CpG -2290 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding unique_peak2_28_260_-0.679242682057317_7.68828465554123_5.17439275214297 chr18 34357701 34359156 + 5.17439275214297 NA intron (NM_007874, intron 2 of 4) intron (NM_007874, intron 2 of 4) 14987 NM_007874 13476 Mm.280075 NM_007874 ENSMUSG00000005873 Reep5 AI324241|AU022809|AW495741|DP1/TB2|Dp1|R74856|TB2/DP1 receptor accessory protein 5 protein-coding common_peak1_28_260_-0.679242682057317_7.68828465554123_5.17439275214297 chrX 75084262 75084906 + 5.17439275214297 NA intron (NM_181584, intron 1 of 9) intron (NM_181584, intron 1 of 9) 321 NM_181584 210710 Mm.267056 NM_181584 ENSMUSG00000032750 Gab3 5930433H21Rik growth factor receptor bound protein 2-associated protein 3 protein-coding common_peak1_65_600_-0.42728892186395_9.01757671977921_5.1734728082663 chrX 98937205 98938055 + 5.1734728082663 NA promoter-TSS (NM_207633) promoter-TSS (NM_207633) -151 NM_207633 77929 Mm.212290 NM_207633 ENSMUSG00000047694 Yipf6 A430107J06Rik Yip1 domain family, member 6 protein-coding common_peak1_311_2648_0.181548254797308_11.4620062557683_5.17339351727973 chr15 60131888 60134818 + 5.17339351727973 NA Intergenic Intergenic -116735 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_94_533_0.387773858587657_9.25458286098138_5.17274086648569 chr1 91069965 91071372 + 5.17274086648569 NA intron (NM_001111311, intron 2 of 7) AT_rich|Low_complexity|Low_complexity 17224 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_109_1041_-0.317236232706236_9.86652144592539_5.17254950617547 chr6 50566632 50567431 + 5.17254950617547 NA promoter-TSS (NM_007808) promoter-TSS (NM_007808) 388 NR_027892 73183 Mm.430720 NR_015581 ENSMUSG00000085776 5430402O13Rik 3110047M22Rik RIKEN cDNA 5430402O13 gene ncRNA unique_peak1_17_38_1.21928314301042_5.89504379036746_5.17237018037272 chr1 180427491 180427873 + 5.17237018037272 NA Intergenic Intergenic 55822 NM_001081227 381310 Mm.44791 NM_001081227 ENSMUSG00000053963 Stum 6330403A02Rik|ENSMUSG00000056615|Gm10001|R75555 mechanosensory transduction mediator protein-coding unique_peak1_17_38_1.21928314301042_5.89504379036746_5.17237018037272-3 chr4 88537608 88537983 + 5.17237018037272 NA Intergenic Intergenic -15001 NM_010510 15977 Mm.1245 NM_010510 ENSMUSG00000048806 Ifnb1 IFN-beta|IFNB|Ifb interferon beta 1, fibroblast protein-coding unique_peak1_17_38_1.21928314301042_5.89504379036746_5.17237018037272-2 chr11 114881171 114881637 + 5.17237018037272 NA Intergenic Intergenic -8637 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding common_peak2_46_191_0.618168586704861_7.89404679407359_5.17124888475847 chr7 63911421 63912690 + 5.17124888475847 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) -4802 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak2_115_704_0.340408489599126_9.63168369208572_5.16948682140291 chr8 111094047 111095399 + 5.16948682140291 NA promoter-TSS (NM_198308) promoter-TSS (NM_198308) -22 NM_198308 319518 Mm.28350 NM_198308 ENSMUSG00000033624 Pdpr 4930402E16Rik|AU018056|mKIAA1990 pyruvate dehydrogenase phosphatase regulatory subunit protein-coding common_peak1_86_806_-0.363627032611928_9.47461134697182_5.169014738516 chr18 65000306 65001702 + 5.169014738516 NA intron (NM_001114386, intron 2 of 30) intron (NM_001114386, intron 2 of 30) -22523 NM_031881 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding common_peak1_70_352_0.469635172575837_8.6983419595591_5.1688735387804-2 chr19 34191917 34192635 + 5.1688735387804 NA promoter-TSS (NM_029682) promoter-TSS (NM_029682) 6 NM_029682 76630 Mm.130952 NM_029682 ENSMUSG00000024776 Stambpl1 1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP STAM binding protein like 1 protein-coding common_peak1_70_352_0.469635172575837_8.6983419595591_5.1688735387804 chr11 88118567 88119754 + 5.1688735387804 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) 20014 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_158_1568_-0.2557533553717_10.4877529592822_5.16836668409077 chr11 120672337 120674220 + 5.16836668409077 NA intron (NM_026877, intron 1 of 15) CpG 305 NM_026877 68938 Mm.294020 NM_026877 ENSMUSG00000025142 Aspscr1 1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG alveolar soft part sarcoma chromosome region, candidate 1 (human) protein-coding common_peak1_52_476_-0.482103690562399_8.65679361072431_5.16726899754943 chr5 135702756 135703714 + 5.16726899754943 NA intron (NM_008898, intron 1 of 15) MTE2a|LTR|ERVL-MaLR 14090 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak1_69_638_-0.411614095237105_9.11386507332844_5.16601574302588 chr1 60179626 60180365 + 5.16601574302588 NA promoter-TSS (NM_173444) promoter-TSS (NM_173444) -604 NM_173444 269198 Mm.205224 NM_173444 ENSMUSG00000073664 Nbeal1 2310076G13Rik|A530050O19Rik|A530083I02Rik|AI662228|ALS2CR17 neurobeachin like 1 protein-coding common_peak2_100_948_-0.333416083415653_9.72355623531328_5.16593604073074 chr9 21264295 21266179 + 5.16593604073074 NA promoter-TSS (NM_153583) promoter-TSS (NM_153583) -48 NM_153583 235040 Mm.440165 NM_153583 ENSMUSG00000002820 Atg4d 9830134P12Rik|APG4-D|Apg4d|Atg4dl|Autl4 autophagy related 4D, cysteine peptidase protein-coding common_peak1_324_2793_0.176903801801751_11.5365682063103_5.16535645217658 chr11 50290976 50293512 + 5.16535645217658 NA promoter-TSS (NM_175334) promoter-TSS (NM_175334) 92 NM_175334 103806 Mm.51116 NM_175334 ENSMUSG00000050567 Maml1 AI644666|AW743257|D930008C07Rik|Mam-1|Mam1|mKIAA0200 mastermind like 1 (Drosophila) protein-coding common_peak2_57_523_-0.458147375838525_8.80434931361819_5.16468393616993 chr2 10152693 10154215 + 5.16468393616993 NA promoter-TSS (NM_172471) promoter-TSS (NM_172471) -89 NM_172471 209378 Mm.313876 NM_172471 ENSMUSG00000025780 Itih5 4631408O11Rik|5430408M01Rik|E130106B02 inter-alpha (globulin) inhibitor H5 protein-coding common_peak1_40_366_-0.558192987777788_8.24053975895432_5.16399580832377 chr11 67531804 67532837 + 5.16399580832377 NA promoter-TSS (NM_008088) promoter-TSS (NM_008088) -678 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_40_366_-0.558192987777788_8.24053975895432_5.16399580832377-2 chrX 71816345 71817279 + 5.16399580832377 NA promoter-TSS (NM_001081356) promoter-TSS (NM_001081356) 54 NM_001290780 67048 Mm.41102 NM_001081356 ENSMUSG00000073131 Vma21 2610030H06Rik|AI840175 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) protein-coding common_peak2_254_2033_0.205672400148277_11.0929401639316_5.16329303378227 chr11 119389621 119394102 + 5.16329303378227 NA Intergenic Intergenic 1389 NR_035453 100316690 NR_035453 ENSMUSG00000088015 Mir1932 mir-1932|mmu-mir-1932 microRNA 1932 ncRNA common_peak2_117_721_0.336283689341011_9.66399687155767_5.16319165818974 chr5 150673677 150674987 + 5.16319165818974 NA intron (NM_175310, intron 1 of 34) CpG 505 NM_175310 100710 Mm.32959 NM_175310 ENSMUSG00000034021 Pds5b AI646570|AS3|AW212954|Aprin|Tg(Wap-ERBB2)229Wzw|WAP-Her-2|mKIAA0979 PDS5 cohesin associated factor B protein-coding common_peak1_117_721_0.336283689341011_9.66399687155767_5.16319165818974 chr8 123224129 123225501 + 5.16319165818974 NA promoter-TSS (NM_194446) promoter-TSS (NM_194446) -26 NM_194446 234854 Mm.190984 NM_194444 ENSMUSG00000033862 Cdk10 BC017131 cyclin-dependent kinase 10 protein-coding common_peak2_104_613_0.363485385306641_9.4438375380235_5.16287445867734 chr15 77698123 77700176 + 5.16287445867734 NA intron (NM_001134802, intron 1 of 4) RMER17C2|LTR|ERVK 260 NM_001134802 666348 Mm.303207 NM_001134802 ENSMUSG00000071716 Apol7e ENSMUSG00000071716 apolipoprotein L 7e protein-coding unique_peak2_27_251_-0.690715173481991_7.63192233675892_5.16085511127652 chr1 127296406 127297787 + 5.16085511127652 NA intron (NM_145128, intron 2 of 17) intron (NM_145128, intron 2 of 17) 92110 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_27_251_-0.690715173481991_7.63192233675892_5.16085511127652 chr9 44418144 44418618 + 5.16085511127652 NA promoter-TSS (NM_201372) promoter-TSS (NM_201372) -374 NM_201372 382073 Mm.259573 NM_201372 ENSMUSG00000043923 Ccdc84 D630044F24Rik|Gm1114 coiled-coil domain containing 84 protein-coding unique_peak2_15_150_-0.942151476199911_6.76732900122512_5.16080261717836 chr4 145045034 145045910 + 5.16080261717836 NA intron (NM_001276465, intron 64 of 69) intron (NM_001276465, intron 64 of 69) 145194 NM_001276502 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding common_peak1_15_150_-0.942151476199911_6.76732900122512_5.16080261717836 chr17 33823940 33824383 + 5.16080261717836 NA promoter-TSS (NM_023202) promoter-TSS (NM_023202) 337 NM_016844 54127 Mm.352374 NM_016844 ENSMUSG00000067288 Rps28 - ribosomal protein S28 protein-coding unique_peak2_3_51_-1.85741107738863_4.77173417944677_5.16048301252722 chr18 19434399 19434724 + 5.16048301252722 NA Intergenic IAPLTR2_Mm|LTR|ERVK 567536 NM_007882 13507 Mm.89935 NM_007882 ENSMUSG00000059898 Dsc3 5430426I24Rik desmocollin 3 protein-coding unique_peak2_3_51_-1.85741107738863_4.77173417944677_5.16048301252722-2 chr3 54811177 54811555 + 5.16048301252722 NA Intergenic CpG -3575 NM_133231 170767 Mm.185735 NM_133231 ENSMUSG00000036615 Rfxap 5730495K23Rik regulatory factor X-associated protein protein-coding common_peak1_73_677_-0.398745500738578_9.20576871276706_5.16041876889192 chr9 110646501 110647780 + 5.16041876889192 NA intron (NM_183276, intron 1 of 53) ORR1F|LTR|ERVL-MaLR 7021 NM_183276 235627 Mm.335481 NM_183276 ENSMUSG00000056724 Nbeal2 1110014F23Rik|BC042396|mKIAA0540 neurobeachin-like 2 protein-coding common_peak1_195_1986_-0.226275297966273_10.8432385082665_5.15973487760431 chr11 98026326 98027812 + 5.15973487760431 NA intron (NM_009078, intron 1 of 5) CpG 145 NM_009078 19921 Mm.10247 NM_009078 ENSMUSG00000017404 Rpl19 - ribosomal protein L19 protein-coding common_peak1_19_46_1.13654537595314_6.12286153965421_5.15883975815352 chr6 99810271 99810759 + 5.15883975815352 NA Intergenic Intergenic -84123 NM_001170419 50501 Mm.87365 NM_015768 ENSMUSG00000030069 Prok2 Bv8|PK2|Prok1 prokineticin 2 protein-coding common_peak1_18_42_1.17409944869479_6.01331447904949_5.15847057817572-2 chr8 31112524 31112958 + 5.15847057817572 NA intron (NM_175136, intron 1 of 5) intron (NM_175136, intron 1 of 5) 895 NM_175136 68867 Mm.29532 NM_175136 ENSMUSG00000039328 Rnf122 1110063C11Rik ring finger protein 122 protein-coding common_peak1_18_42_1.17409944869479_6.01331447904949_5.15847057817572-3 chr8 90876141 90876729 + 5.15847057817572 NA intron (NM_177224, intron 2 of 39) intron (NM_177224, intron 2 of 39) 47600 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_18_42_1.17409944869479_6.01331447904949_5.15847057817572 chr7 132724745 132725133 + 5.15847057817572 NA intron (NM_175268, intron 4 of 4) intron (NM_175268, intron 4 of 4) 61996 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_114_1093_-0.308830631820728_9.94098170688219_5.15644576052952 chr11 5787440 5788425 + 5.15644576052952 NA promoter-TSS (NM_001146309) promoter-TSS (NM_001146309) -551 NM_001146309 13169 Mm.256925 NM_013810 ENSMUSG00000020476 Dbnl Abp1|SH3P7|mAbp1 drebrin-like protein-coding common_peak1_223_1713_0.223250289464493_10.8547765388447_5.15540662709655 chr1 165459546 165461139 + 5.15540662709655 NA promoter-TSS (NM_027430) promoter-TSS (NM_027430) 121 NM_028759 74106 Mm.227605 NM_028759 ENSMUSG00000026571 Dcaf6 1200006M05Rik|Iqwd1|PC326 DDB1 and CUL4 associated factor 6 protein-coding common_peak1_42_384_-0.542987465328313_8.31722090291811_5.15449023254669 chrX 153498150 153498850 + 5.15449023254669 NA exon (NM_018798, exon 1 of 1) exon (NM_018798, exon 1 of 1) 268 NM_018798 54609 Mm.430772 NM_018798 ENSMUSG00000050148 Ubqln2 Chap1|Dsk2|HRIHFB2157|Plic-2|Plic2 ubiquilin 2 protein-coding common_peak2_42_384_-0.542987465328313_8.31722090291811_5.15449023254669 chr1 37299826 37300832 + 5.15449023254669 NA intron (NM_001290797, intron 1 of 25) CpG 491 NM_001290797 269180 Mm.5294 NM_030266 ENSMUSG00000026113 Inpp4a 107kDa|9630012D15|D130048C09Rik|R74740 inositol polyphosphate-4-phosphatase, type I protein-coding common_peak2_121_755_0.328889338012257_9.7266870932272_5.15447253207343 chr14 57716284 57719603 + 5.15447253207343 NA intron (NM_015771, intron 2 of 7) intron (NM_015771, intron 2 of 7) 16475 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_124_780_0.324942040872724_9.77164975857834_5.15377769682242 chr7 121034053 121035795 + 5.15377769682242 NA exon (NM_021554, exon 1 of 5) exon (NM_021554, exon 1 of 5) 479 NM_021554 59052 Mm.29122 NM_021554 ENSMUSG00000030876 Mettl9 0610012D09Rik|AA517660|Drev|MNCb-5680 methyltransferase like 9 protein-coding common_peak2_30_99_0.822826014959582_7.05526919725452_5.15355456011999 chr10 60281987 60282794 + 5.15355456011999 NA intron (NM_001146120, intron 1 of 13) intron (NM_001146120, intron 1 of 13) -2071 NM_001146124 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding common_peak2_30_99_0.822826014959582_7.05526919725452_5.15355456011999-2 chr6 94499976 94500811 + 5.15355456011999 NA promoter-TSS (NM_026255) promoter-TSS (NM_026255) 79 NM_026255 67582 Mm.280725 NM_026255 ENSMUSG00000045100 Slc25a26 4930433D19Rik|4933433F13Rik|AW557176|D6Bwg0781e|Slc25a6 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26 protein-coding common_peak2_79_418_0.433552416304137_8.92758264185142_5.15315470710788 chr2 44922813 44924255 + 5.15315470710788 NA Intergenic Intergenic -61912 NM_172662 227835 Mm.314312 NM_172662 ENSMUSG00000036890 Gtdc1 E330008O22Rik glycosyltransferase-like domain containing 1 protein-coding common_peak2_79_418_0.433552416304137_8.92758264185142_5.15315470710788-2 chr7 19603688 19604977 + 5.15315470710788 NA promoter-TSS (NR_125835) promoter-TSS (NR_125835) 29 NR_125835 53609 Mm.20913 NM_016680 ENSMUSG00000061028 Clasrp Clasp|Sfrs16|Srsf16|Swap2 CLK4-associating serine/arginine rich protein protein-coding unique_peak2_44_402_-0.528457390963336_8.3904073330463_5.15171988351925 chr15 102095462 102097214 + 5.15171988351925 NA 3' UTR (NM_145625, exon 15 of 15) 3' UTR (NM_145625, exon 15 of 15) -6650 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak2_60_552_-0.446616219187735_8.88782756064084_5.15154868337101 chr17 17293766 17295048 + 5.15154868337101 NA Intergenic Intergenic -79925 NM_025934 67045 Mm.35117 NM_025934 ENSMUSG00000023852 Riok2 2010110K24Rik|2410085M17Rik RIO kinase 2 (yeast) protein-coding common_peak1_26_242_-0.702604936766186_7.57351003522269_5.15071871918981 chr1 21367941 21368315 + 5.15071871918981 NA promoter-TSS (NM_001033904) promoter-TSS (NM_001033904) -203 NM_001033904 433278 Mm.26006 NM_001033904 ENSMUSG00000041722 Khdc1c Khdc1b KH domain containing 1C protein-coding common_peak1_176_1769_-0.239872723775251_10.6695972830827_5.15050747471234 chr2 163994577 163996117 + 5.15050747471234 NA 5' UTR (NM_018753, exon 1 of 6) 5' UTR (NM_018753, exon 1 of 6) 150 NM_018753 54401 Mm.34319 NM_018753 ENSMUSG00000018326 Ywhab 1300003C17Rik|14-3-3b tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide protein-coding common_peak2_125_789_0.322512628073673_9.7869651571013_5.15038986534706 chr16 4003070 4004514 + 5.15038986534706 NA Intergenic CpG -2114 NM_177472 52864 Mm.29935 NM_177472 ENSMUSG00000039738 Slx4 AI256635|AI426760|Btbd12|D16Bwg1016e SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) protein-coding common_peak1_55_504_-0.466962516434876_8.74665831942172_5.14979638893076 chr11 97187242 97187933 + 5.14979638893076 NA 5' UTR (NM_008379, exon 1 of 22) 5' UTR (NM_008379, exon 1 of 22) 305 NM_008379 16211 Mm.251013 NM_008379 ENSMUSG00000001440 Kpnb1 AA409963|IPOB|Impnb karyopherin (importin) beta 1 protein-coding common_peak1_161_1111_0.274013321455728_10.2559477334514_5.14963304070641 chr13 3538098 3539194 + 5.14963304070641 NA intron (NM_008112, intron 1 of 10) intron (NM_008112, intron 1 of 10) 571 NM_008112 14569 Mm.153226 NM_008112 ENSMUSG00000021218 Gdi2 GDI-B|GDIB|Gdi3 guanosine diphosphate (GDP) dissociation inhibitor 2 protein-coding unique_peak2_25_74_0.926602554145052_6.69211996756841_5.14897742721304 chr4 129496066 129496772 + 5.14897742721304 NA Intergenic Intergenic 5229 NM_001085491 68233 Mm.424983 NM_001085491 ENSMUSG00000078554 Fam229a 1700125D06Rik family with sequence similarity 229, member A protein-coding common_peak1_23_64_0.99140765506364_6.51807164056027_5.14884948388389 chr9 66913904 66914454 + 5.14884948388389 NA intron (NM_173413, intron 1 of 7) intron (NM_173413, intron 1 of 7) 5526 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak2_23_64_0.99140765506364_6.51807164056027_5.14884948388389 chr2 165861088 165861621 + 5.14884948388389 NA intron (NM_001291158, intron 2 of 23) intron (NM_001291158, intron 2 of 23) -3181 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_322_2772_0.17686454495184_11.5256641735154_5.14804392864806 chr9 90268624 90271405 + 5.14804392864806 NA intron (NM_194334, intron 1 of 12) MIR|SINE|MIR 755 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak1_128_815_0.317436344435738_9.83114351418936_5.14738248167423 chr2 166605463 166607053 + 5.14738248167423 NA intron (NM_177782, intron 10 of 39) intron (NM_177782, intron 10 of 39) -66460 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_126_798_0.320159001246068_9.80213119355101_5.14731684386381 chr3 142619989 142621257 + 5.14731684386381 NA promoter-TSS (NM_010260) promoter-TSS (NM_010260) -40 NM_010260 14469 Mm.24038 NM_010260 ENSMUSG00000028270 Gbp2 - guanylate binding protein 2 protein-coding unique_peak2_31_286_-0.642041352364163_7.84388625049361_5.1462996366089 chr3 135446108 135448026 + 5.1462996366089 NA intron (NM_025356, intron 2 of 7) intron (NM_025356, intron 2 of 7) 8308 NM_025356 66105 Mm.49884 NM_025356 ENSMUSG00000078578 Ube2d3 1100001F19Rik|9430029A22Rik|AA414951 ubiquitin-conjugating enzyme E2D 3 protein-coding common_peak2_181_1299_0.254661445990587_10.4716266309111_5.14585226652241 chr7 64010815 64013002 + 5.14585226652241 NA Intergenic Intergenic -72993 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak1_37_339_-0.582414421554456_8.11818372536047_5.14547476259942 chrX 12673011 12673618 + 5.14547476259942 NA intron (NM_175141, intron 1 of 6) CpG 325 NM_175141 69155 Mm.15974 NM_175141 ENSMUSG00000044148 1810030O07Rik - RIKEN cDNA 1810030O07 gene protein-coding common_peak1_24_69_0.956732175191418_6.60764910454068_5.14451638957067 chr7 114161294 114161787 + 5.14451638957067 NA Intergenic MLT1L|LTR|ERVL-MaLR -43759 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak2_56_255_0.544498719550173_8.27224935977509_5.14435128098408 chr11 43358133 43359528 + 5.14435128098408 NA Intergenic LTR33|LTR|ERVL 15631 NR_029558 387164 NR_029558 ENSMUSG00000065601 Mir146 Mirn146|miR-146a|mmu-mir-146 microRNA 146 ncRNA common_peak1_183_1848_-0.234231771751617_10.7354136235284_5.1429628140207 chr3 137832289 137834607 + 5.1429628140207 NA Intergenic Intergenic -31039 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak1_74_687_-0.396115046412431_9.22820723149588_5.14268830367214 chr11 82870279 82871263 + 5.14268830367214 NA promoter-TSS (NM_001164570) promoter-TSS (NM_001164570) -27 NM_001164570 67338 Mm.341608 NM_026097 ENSMUSG00000020696 Rffl 1700051E09Rik|4930516L10Rik|BG080975|Carp2 ring finger and FYVE like domain containing protein protein-coding common_peak1_46_421_-0.517968101281168_8.4621151380666_5.14103997902439 chr7 4341858 4342763 + 5.14103997902439 NA intron (NM_010746, intron 5 of 6) Lx8b|LINE|L1 4586 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak2_46_421_-0.517968101281168_8.4621151380666_5.14103997902439 chr5 53994276 53996228 + 5.14103997902439 NA Intergenic Intergenic -3271 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak1_342_3773_-0.16146636142429_11.8011455268883_5.14054837843427 chr17 84329244 84332939 + 5.14054837843427 NA intron (NM_183021, intron 28 of 37) intron (NM_183021, intron 28 of 37) 135117 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak1_402_3695_0.153938078393082_11.9287180806126_5.13995555416294 chr16 44138286 44141238 + 5.13995555416294 NA promoter-TSS (NM_028108) promoter-TSS (NM_028108) -47 NM_028108 72117 Mm.278726 NM_028108 ENSMUSG00000022698 Naa50 2600005K24Rik|2810441M03Rik|AW112078|Mak3|Mak3p|Nat13|Nat5|San N(alpha)-acetyltransferase 50, NatE catalytic subunit protein-coding common_peak1_121_1167_-0.298692796646689_10.0404781605567_5.13958841856979 chr16 44356727 44358813 + 5.13958841856979 NA exon (NM_144550, exon 4 of 18) exon (NM_144550, exon 4 of 18) 10369 NM_144550 212514 Mm.24035 NM_144550 ENSMUSG00000043065 Spice1 Ccdc52|D16Ertd480e spindle and centriole associated protein 1 protein-coding common_peak1_276_2267_0.195015124105302_11.2447124869949_5.13800250751971 chr5 33628584 33630710 + 5.13800250751971 NA promoter-TSS (NM_178390) promoter-TSS (NM_178390) -12 NM_178390 74504 Mm.294695 NM_178390 ENSMUSG00000037339 Fam53a 2410018C17Rik|5430419M09Rik|Dntnp family with sequence similarity 53, member A protein-coding common_peak1_16_158_-0.909346694310184_6.85820960812926_5.13742288213515 chr6 91683218 91683568 + 5.13742288213515 NA promoter-TSS (NM_009320) promoter-TSS (NM_009320) -674 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak1_16_158_-0.909346694310184_6.85820960812926_5.13742288213515-2 chr7 90476160 90476628 + 5.13742288213515 NA promoter-TSS (NM_026734) promoter-TSS (NM_026734) -399 NM_026734 68472 Mm.289791 NM_026734 ENSMUSG00000030614 Tmem126b 1110001A23Rik transmembrane protein 126B protein-coding common_peak2_16_158_-0.909346694310184_6.85820960812926_5.13742288213515 chr5 8839223 8840438 + 5.13742288213515 NA intron (NM_011075, intron 21 of 27) intron (NM_011075, intron 21 of 27) 41683 NM_011075 18669 Mm.146649 NM_011075 ENSMUSG00000028970 Abcb1b Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr ATP-binding cassette, sub-family B (MDR/TAP), member 1B protein-coding common_peak2_179_1280_0.256348499595697_10.4512290101395_5.13720917837513 chr17 28800364 28802479 + 5.13720917837513 NA intron (NM_001081315, intron 1 of 12) CpG 295 NM_001081315 268936 Mm.291877 NM_199061 ENSMUSG00000063952 Brpf3 AI413466|AW493400|mKIAA1286 bromodomain and PHD finger containing, 3 protein-coding common_peak2_335_3684_-0.163525015438509_11.7656863962632_5.1371389484242 chr16 22262732 22266809 + 5.1371389484242 NA intron (NM_009186, intron 1 of 8) intron (NM_009186, intron 1 of 8) 1159 NM_009186 20462 Mm.210352 NM_009186 ENSMUSG00000022858 Tra2b 5730405G21Rik|D16Ertd266e|SIG-41|Sfrs10|Silg41|TRA2beta transformer 2 beta homolog (Drosophila) protein-coding common_peak1_208_1563_0.23272081921739_10.727385206916_5.13481464773583 chr9 96436957 96438995 + 5.13481464773583 NA Intergenic Intergenic 40699 NM_011279 19823 Mm.28235 NM_011279 ENSMUSG00000051234 Rnf7 Rbx2|SAG ring finger protein 7 protein-coding common_peak2_47_197_0.611031159198842_7.93487219967903_5.1347688928123 chr6 146887994 146889073 + 5.1347688928123 NA promoter-TSS (NM_026221) promoter-TSS (NM_026221) 39 NM_026221 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak2_47_197_0.611031159198842_7.93487219967903_5.1347688928123-2 chr8 90876428 90877858 + 5.1347688928123 NA intron (NM_177224, intron 2 of 39) intron (NM_177224, intron 2 of 39) 48308 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_79_736_-0.381161959091582_9.33493982954928_5.13475428483894 chr11 109419579 109420687 + 5.13475428483894 NA Intergenic Intergenic -5813 NM_025275 13929 Mm.211850 NM_025275 ENSMUSG00000020610 Amz2 AA408420|ESTM12|X83328 archaelysin family metallopeptidase 2 protein-coding common_peak2_79_736_-0.381161959091582_9.33493982954928_5.13475428483894 chr9 20877449 20879252 + 5.13475428483894 NA exon (NM_145154, exon 2 of 6) exon (NM_145154, exon 2 of 6) 1360 NM_145154 70726 Mm.34019 NM_145154 ENSMUSG00000038742 Angptl6 6330404E11Rik|AGF|ARP3|Arp5 angiopoietin-like 6 protein-coding common_peak1_97_917_-0.338861795316767_9.67291944575542_5.13346358545614 chr8 110997110 110998394 + 5.13346358545614 NA promoter-TSS (NM_007916) promoter-TSS (NM_007916) 71 NM_007916 13680 Mm.287901 NM_007916 ENSMUSG00000015023 Ddx19a DBP5|Ddx19|Eif4a-rs1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a protein-coding common_peak2_49_210_0.591528314615555_8.01686334601496_5.13203265756581 chr18 35498214 35499018 + 5.13203265756581 NA intron (NM_030749, intron 1 of 9) intron (NM_030749, intron 1 of 9) 309 NM_030749 81500 Mm.291482 NM_030749 ENSMUSG00000024357 Sil1 1810057E01Rik|AI042831|wz endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae) protein-coding common_peak2_90_846_-0.353873116612151_9.54928160102612_5.1320270946247 chr12 32291720 32293521 + 5.1320270946247 NA Intergenic C-rich|Low_complexity|Low_complexity -83971 NM_001146200 30955 Mm.101369 NM_020272 ENSMUSG00000020573 Pik3cg 5830428L06Rik|PI3Kgamma|p110gamma phosphoinositide-3-kinase, catalytic, gamma polypeptide protein-coding unique_peak2_11_116_-1.08320156267767_6.32876393824457_5.13189904965243 chr7 16055073 16055934 + 5.13189904965243 NA Intergenic Intergenic -16439 NM_001099277 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak1_21_55_1.05244282063635_6.33357633237578_5.1318990496524-2 chr17 17622563 17623076 + 5.1318990496524 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 1670 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_21_55_1.05244282063635_6.33357633237578_5.1318990496524 chr13 81163322 81163770 + 5.1318990496524 NA intron (NM_054053, intron 86 of 89) Lx8|LINE|L1 199472 NR_015587 319983 Mm.343027 NR_015587 ENSMUSG00000097098 9330111N05Rik - RIKEN cDNA 9330111N05 gene ncRNA common_peak1_21_55_1.05244282063635_6.33357633237578_5.1318990496524-3 chr6 112694980 112695545 + 5.1318990496524 NA intron (NM_021385, intron 1 of 11) intron (NM_021385, intron 1 of 11) 1408 NM_021385 58186 Mm.103812 NM_021385 ENSMUSG00000030254 Rad18 2810024C04Rik|Rad18sc RAD18 E3 ubiquitin protein ligase protein-coding unique_peak1_21_55_1.05244282063635_6.33357633237578_5.1318990496524 chrX 75729587 75730189 + 5.1318990496524 NA intron (NR_029443, intron 8 of 8) intron (NR_029443, intron 8 of 8) 34811 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA common_peak1_268_2850_-0.186893202368944_11.3838057227535_5.1308824357465 chr11 49202566 49204238 + 5.1308824357465 NA promoter-TSS (NM_001024846) promoter-TSS (NM_001024846) -98 NM_001024846 22720 Mm.16650 NM_009562 ENSMUSG00000046311 Zfp62 - zinc finger protein 62 protein-coding common_peak1_111_671_0.347471949611878_9.5660533975847_5.13042420249761 chr9 98563078 98564491 + 5.13042420249761 NA promoter-TSS (NM_015827) promoter-TSS (NM_015827) 53 NM_015827 50797 Mm.400464 NM_015827 ENSMUSG00000032458 Copb2 AI256832 coatomer protein complex, subunit beta 2 (beta prime) protein-coding common_peak2_86_471_0.410154781304012_9.08772044001385_5.13019114803249 chr14 32513231 32514248 + 5.13019114803249 NA intron (NM_001081221, intron 1 of 20) CpG 218 NM_001081221 319955 Mm.318310 NM_177043 ENSMUSG00000054051 Ercc6 4732403I04|C130058G22Rik|CSB excision repair cross-complementing rodent repair deficiency, complementation group 6 protein-coding common_peak2_100_581_0.371972850697174_9.37086176825687_5.13011754889744 chr12 112643831 112645631 + 5.13011754889744 NA promoter-TSS (NM_013929) promoter-TSS (NM_013929) -97 NM_001161737 30954 Mm.289812 NM_013929 ENSMUSG00000064326 Siva1 CD27bp|Siva SIVA1, apoptosis-inducing factor protein-coding common_peak1_207_1553_0.233487389792289_10.7185144833039_5.12956516098447 chr5 140418409 140420213 + 5.12956516098447 NA promoter-TSS (NM_133916) promoter-TSS (NM_133916) 6 NM_133916 27979 Mm.21671 NM_133916 ENSMUSG00000056076 Eif3b AL033316|AL033334|AL033369|AW208965|D5Wsu45e|EIF3-ETA|EIF3-P110|EIF3-P116|Eif3s9|PRT1 eukaryotic translation initiation factor 3, subunit B protein-coding common_peak1_36_132_0.72450121571022_7.4175330433563_5.12931962514074 chr4 155177486 155178207 + 5.12931962514074 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 44689 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_36_132_0.72450121571022_7.4175330433563_5.12931962514074 chr7 140981992 140982816 + 5.12931962514074 NA Intergenic Intergenic 14328 NM_001112715 68713 Mm.175661 NM_026820 ENSMUSG00000025491 Ifitm1 1110036C17Rik|DSPA2a|Mil-2|Mil2 interferon induced transmembrane protein 1 protein-coding common_peak1_36_132_0.72450121571022_7.4175330433563_5.12931962514074-2 chr7 80995397 80996215 + 5.12931962514074 NA intron (NM_178707, intron 1 of 9) L2c|LINE|L2 2122 NM_178707 233410 Mm.29525 NM_178707 ENSMUSG00000005621 Zfp592 8430405N24|A730014M16Rik|Znf592|mKIAA0211 zinc finger protein 592 protein-coding common_peak2_65_317_0.491049303562882_8.5584076070658_5.1278696941214 chr7 127041960 127043107 + 5.1278696941214 NA promoter-TSS (NM_145588) promoter-TSS (NM_145588) -113 NM_145588 110033 Mm.286488 NM_145588 ENSMUSG00000030677 Kif22 AU021460|C81217|Kid|Kif22a kinesin family member 22 protein-coding common_peak2_109_1040_-0.315851023727145_9.86582884143584_5.1276260062886 chr13 60847328 60849784 + 5.1276260062886 NA intron (NM_178098, intron 5 of 7) Lx5|LINE|L1 15860 NM_178098 214639 Mm.19839 NM_178098 ENSMUSG00000050345 4930486L24Rik AW545031 RIKEN cDNA 4930486L24 gene protein-coding common_peak2_81_433_0.426504343807304_8.97480340434813_5.12752486071418 chr17 35467312 35469186 + 5.12752486071418 NA Intergenic B1_Mus1|SINE|Alu -1840 NM_010391 15007 Mm.88795 NM_010391 ENSMUSG00000067235 H2-Q10 H-2Q10|Q10|Qa10 histocompatibility 2, Q region locus 10 protein-coding common_peak1_62_296_0.507290039151016_8.46796414037627_5.12741669570317 chr10 94509102 94509924 + 5.12741669570317 NA Intergenic RLTR17B_Mm|LTR|ERVK -5344 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 AW488095|C630016B22Rik|C88213|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak2_62_296_0.507290039151016_8.46796414037627_5.12741669570317 chr3 52400365 52402140 + 5.12741669570317 NA Intergenic Intergenic 132915 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak2_45_185_0.625914304171834_7.85211596319395_5.12543871098712 chr2 152397654 152398924 + 5.12543871098712 NA promoter-TSS (NM_011438) promoter-TSS (NM_011438) -243 NM_011438 20667 Mm.28424 NM_011438 ENSMUSG00000051817 Sox12 2010205A02Rik SRY (sex determining region Y)-box 12 protein-coding common_peak1_45_185_0.625914304171834_7.85211596319395_5.12543871098712 chr2 150292438 150293475 + 5.12543871098712 NA Intergenic Intergenic 35439 NM_001142410 100216455 Mm.484816 NM_001142410 ENSMUSG00000079008 Gm14124 EG640962|ENSMUSG00000074735|Gm10749|OTTMUSG00000015734 predicted gene 14124 protein-coding common_peak1_54_242_0.556478514780134_8.20305176099585_5.12520250650854 chr17 28313513 28314201 + 5.12520250650854 NA non-coding (NR_028297, exon 1 of 10) non-coding (NR_028297, exon 1 of 10) 327 NM_001163820 72775 Mm.201859 NM_028348 ENSMUSG00000007570 Fance 2810451D06Rik|AI415634|AW209126 Fanconi anemia, complementation group E protein-coding common_peak2_39_357_-0.566069238447124_8.20078115804069_5.12520250650854 chr2 166219833 166221388 + 5.12520250650854 NA Intergenic RMER17A2|LTR|ERVK -53298 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 OTTMUSG00000001131 predicted gene 11468 ncRNA common_peak1_185_1338_0.250488786749635_10.5121846386991_5.12459406669528 chr2 152104647 152106287 + 5.12459406669528 NA promoter-TSS (NM_029688) promoter-TSS (NM_029688) -57 NM_029688 76650 Mm.218639 NM_029688 ENSMUSG00000032802 Srxn1 1700127B04Rik|AI854065|AW488194|Npn3|Srx|Srx1|TX01 sulfiredoxin 1 homolog (S. cerevisiae) protein-coding common_peak2_468_4495_0.139653489194265_12.2042530648181_5.12401160496375 chr16 92797684 92804975 + 5.12401160496375 NA intron (NM_001111022, intron 2 of 6) (TCTCTG)n|Simple_repeat|Simple_repeat 24745 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_43_173_0.643466558031579_7.76467677486452_5.12389091820479-2 chr7 116149510 116150478 + 5.12389091820479 NA intron (NM_001305189, intron 11 of 20) intron (NM_001305189, intron 11 of 20) 39847 NM_172743 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak2_43_173_0.643466558031579_7.76467677486452_5.12389091820479 chr15 80635406 80636128 + 5.12389091820479 NA intron (NM_001289442, intron 3 of 7) intron (NM_001289442, intron 3 of 7) -10306 NR_105922 102466773 NR_105922 ENSMUSG00000098631 Mir6957 Gm27895|mmu-mir-6957 microRNA 6957 ncRNA unique_peak2_17_166_-0.879018930601385_6.94419482717336_5.1236355010331 chrX 75381915 75382898 + 5.1236355010331 NA promoter-TSS (NM_026126) promoter-TSS (NM_026126) 7 NM_026126 67391 Mm.126404 NM_026126 ENSMUSG00000031198 Fundc2 4833415N24Rik|DC44|HCBP6 FUN14 domain containing 2 protein-coding common_peak1_17_166_-0.879018930601385_6.94419482717336_5.1236355010331-2 chr2 102401166 102401582 + 5.1236355010331 NA promoter-TSS (NM_020267) promoter-TSS (NM_020267) -474 NM_020267 80985 Mm.315002 NM_020267 ENSMUSG00000027189 Trim44 Dipb|Mc7 tripartite motif-containing 44 protein-coding common_peak1_17_166_-0.879018930601385_6.94419482717336_5.1236355010331 chr19 46056083 46056454 + 5.1236355010331 NA promoter-TSS (NM_001081214) promoter-TSS (NM_001081214) -271 NM_001081214 226169 Mm.2415 NM_145504 ENSMUSG00000055491 Pprc1 A930018M19|BC013720|PRC|mKIAA0595 peroxisome proliferative activated receptor, gamma, coactivator-related 1 protein-coding common_peak1_17_166_-0.879018930601385_6.94419482717336_5.1236355010331-3 chr6 30391109 30391659 + 5.1236355010331 NA promoter-TSS (NM_172735) promoter-TSS (NM_172735) -364 NM_001311086 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding common_peak1_30_277_-0.6522588679892_7.79281163872891_5.12345500687815-2 chr14 27340389 27340848 + 5.12345500687815 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) 4581 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_30_277_-0.6522588679892_7.79281163872891_5.12345500687815 chr10 78184526 78185237 + 5.12345500687815 NA intron (NM_029546, intron 1 of 20) intron (NM_029546, intron 1 of 20) 268 NM_029546 110816 Mm.103522 NM_029546 ENSMUSG00000032834 Pwp2 6530411D08Rik|Pwp2h|wdp103 PWP2 periodic tryptophan protein homolog (yeast) protein-coding common_peak2_30_277_-0.6522588679892_7.79281163872891_5.12345500687815 chr7 126396076 126397014 + 5.12345500687815 NA exon (NM_010900, exon 1 of 8) exon (NM_010900, exon 1 of 8) 192 NM_010900 18020 Mm.1389 NM_010900 ENSMUSG00000030722 Nfatc2ip D7Ertd304e|NIP45 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein protein-coding unique_peak2_30_277_-0.6522588679892_7.79281163872891_5.12345500687815 chr10 94524394 94525970 + 5.12345500687815 NA intron (NM_172051, intron 1 of 3) intron (NM_172051, intron 1 of 3) 10325 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 AW488095|C630016B22Rik|C88213|Tmcc1 transmembrane and coiled coil domains 3 protein-coding unique_peak2_13_133_-1.0061367516262_6.56302081464467_5.12031002524181 chr12 102344124 102345125 + 5.12031002524181 NA intron (NM_001161365, intron 3 of 9) intron (NM_001161365, intron 3 of 9) 60983 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_29_94_0.838800824266755_6.98925602046433_5.11984702999792 chr2 71801024 71801667 + 5.11984702999792 NA intron (NM_001277970, intron 1 of 24) intron (NM_001277970, intron 1 of 24) 14406 NM_001277970 16403 Mm.225096 NM_008397 ENSMUSG00000027111 Itga6 5033401O05Rik|AI115430|Cd49f|VLA-6 integrin alpha 6 protein-coding common_peak2_29_94_0.838800824266755_6.98925602046433_5.11984702999792 chr11 87595491 87596209 + 5.11984702999792 NA intron (NM_133215, intron 2 of 18) CpG 3633 NM_133215 170749 Mm.399376 NM_133215 ENSMUSG00000018401 Mtmr4 AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647 myotubularin related protein 4 protein-coding common_peak1_29_94_0.838800824266755_6.98925602046433_5.11984702999792-2 chr5 36554129 36554656 + 5.11984702999792 NA intron (NM_001113362, intron 3 of 14) intron (NM_001113362, intron 3 of 14) -23769 NM_001113364 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding common_peak2_29_94_0.838800824266755_6.98925602046433_5.11984702999792-2 chr2 32121042 32121810 + 5.11984702999792 NA Intergenic Intergenic 25775 NM_145521 227721 Mm.257236 NM_145521 ENSMUSG00000051373 Plpp7 D830019K17Rik|NET39|Ppapdc3 phospholipid phosphatase 7 (inactive) protein-coding common_peak1_19_182_-0.824565610653266_7.10341703295741_5.11902041538949 chr19 46740277 46740860 + 5.11902041538949 NA exon (NM_020577, exon 11 of 11) exon (NM_020577, exon 11 of 11) -21041 NM_033569 94219 Mm.306903 NM_033569 ENSMUSG00000064105 Cnnm2 AU015877|AW048635|Acdp2|Clp2 cyclin M2 protein-coding common_peak1_51_467_-0.488331163756117_8.62619913770535_5.11871427847543 chr12 73598486 73599381 + 5.11871427847543 NA intron (NM_001313977, intron 2 of 14) intron (NM_001313977, intron 2 of 14) 14137 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak2_93_526_0.388084246975161_9.23570127512479_5.11865163359087 chr11 72952615 72954791 + 5.11865163359087 NA Intergenic Intergenic -7466 NM_016745 53313 Mm.6306 NM_016745 ENSMUSG00000020788 Atp2a3 SERCA3b|Serca3 ATPase, Ca++ transporting, ubiquitous protein-coding common_peak1_38_143_0.703018448165548_7.52143422552509_5.11821332487819-2 chr6 51544075 51545104 + 5.11821332487819 NA promoter-TSS (NM_028035) promoter-TSS (NM_028035) 66 NM_001127348 71982 Mm.294166 NM_028035 ENSMUSG00000038301 Snx10 2410004M09Rik sorting nexin 10 protein-coding common_peak1_38_143_0.703018448165548_7.52143422552509_5.11821332487819 chr12 25352432 25353075 + 5.11821332487819 NA Intergenic Intergenic 223579 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_18_174_-0.850846908435439_7.02578765761461_5.11790841863707 chr12 69242006 69242531 + 5.11790841863707 NA intron (NM_178253, intron 1 of 12) intron (NM_178253, intron 1 of 12) 436 NM_178253 271005 Mm.180969 NM_178253 ENSMUSG00000051890 Klhdc1 - kelch domain containing 1 protein-coding unique_peak2_18_174_-0.850846908435439_7.02578765761461_5.11790841863707 chr8 69822374 69823512 + 5.11790841863707 NA intron (NM_020028, intron 1 of 2) intron (NM_020028, intron 1 of 2) 378 NM_020028 53978 Mm.23253 NM_020028 ENSMUSG00000031861 Lpar2 Edg4|IPA2|LPA2 lysophosphatidic acid receptor 2 protein-coding common_peak1_18_174_-0.850846908435439_7.02578765761461_5.11790841863707-2 chr5 148377441 148377933 + 5.11790841863707 NA intron (NM_007513, intron 1 of 12) intron (NM_007513, intron 1 of 12) 15128 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_76_706_-0.388844864036333_9.27114397279123_5.11767310531513-2 chr10 128625899 128626802 + 5.11767310531513 NA intron (NM_013765, intron 1 of 3) CpG 156 NM_013765 27370 Mm.32118 NM_013765 ENSMUSG00000025362 Rps26 - ribosomal protein S26 protein-coding common_peak1_76_706_-0.388844864036333_9.27114397279123_5.11767310531513 chr10 78009324 78010022 + 5.11767310531513 NA exon (NM_008826, exon 1 of 22) exon (NM_008826, exon 1 of 22) 123 NM_008826 18641 Mm.269649 NM_008826 ENSMUSG00000020277 Pfkl AA407869|ATP-PFK|PFK-L phosphofructokinase, liver, B-type protein-coding common_peak1_23_216_-0.747775764352385_7.38766335026829_5.11687357666214 chr9 50324377 50325049 + 5.11687357666214 NA Intergenic Intergenic -91531 NR_131161 71873 NR_131161 ENSMUSG00000110916 2310003N18Rik - RIKEN cDNA 2310003N18 gene ncRNA common_peak1_165_1644_-0.247753688267899_10.5599950244887_5.11590500371809 chr19 29805370 29807133 + 5.11590500371809 NA promoter-TSS (NM_172836) promoter-TSS (NM_172836) -242 NM_172836 240613 Mm.313351 NM_172836 ENSMUSG00000046138 9930021J03Rik ENSMUSG00000048936|Gm9832|mKIAA2026 RIKEN cDNA 9930021J03 gene protein-coding common_peak1_599_6166_0.119633510870718_12.6501698864134_5.11516250182378 chr6 48744529 48748645 + 5.11516250182378 NA intron (NM_175035, intron 1 of 2) intron (NM_175035, intron 1 of 2) 390 NM_175035 317757 Mm.455917 NM_175035 ENSMUSG00000043505 Gimap5 D630024P16|E230026N22Rik GTPase, IMAP family member 5 protein-coding common_peak1_49_448_-0.497944131418405_8.56159956903194_5.11514356191742 chr13 113104973 113105699 + 5.11514356191742 NA Intergenic L1MB7|LINE|L1 -4355 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak1_24_225_-0.734163770278804_7.45309707727579_5.11511665582476 chr2 150909537 150910020 + 5.11511665582476 NA exon (NM_001163476, exon 1 of 5) exon (NM_001163476, exon 1 of 5) 184 NM_001163476 69270 Mm.271603 NM_027014 ENSMUSG00000027454 Gins1 2810418N01Rik|Gins4|PSF1|mKIAA0186 GINS complex subunit 1 (Psf1 homolog) protein-coding unique_peak2_24_225_-0.734163770278804_7.45309707727579_5.11511665582476 chr11 19964997 19966606 + 5.11511665582476 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 41359 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_41_375_-0.550501896692783_8.27933790333125_5.1133318748698 chr3 85126947 85127637 + 5.1133318748698 NA Intergenic Lx8|LINE|L1 -161712 NM_001040461 654362 Mm.466598 NM_001040461 Fbxw7as1 Dear|Dear1|Despr F-box and WD-40 domain protein 7 antisense transcript 1 ncRNA common_peak1_148_1456_-0.263860159956891_10.3768550820861_5.11185840166348 chr7 15945494 15946798 + 5.11185840166348 NA promoter-TSS (NM_133831) promoter-TSS (NM_133831) -38 NM_133831 68077 Mm.277634 NM_133831 ENSMUSG00000041560 Gltscr2 5330430H08Rik|9430097C02Rik|AU041936|AW536441|PICT-1|R74911 glioma tumor suppressor candidate region gene 2 protein-coding common_peak2_387_3519_0.15720327221146_11.8599613496304_5.11181042458359 chr10 7953412 7957457 + 5.11181042458359 NA intron (NM_138667, intron 1 of 6) CpG 689 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak2_204_1524_0.234955324606137_10.6920711896407_5.11129755495644 chr19 4112434 4115330 + 5.11129755495644 NA TTS (NM_008851) TTS (NM_008851) 7693 NM_001276284 11632 Mm.10433 NM_016666 ENSMUSG00000024847 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2 aryl-hydrocarbon receptor-interacting protein protein-coding common_peak2_381_3449_0.158603170620257_11.831682231863_5.11056705266714 chr5 34186149 34190150 + 5.11056705266714 NA promoter-TSS (NM_010753) promoter-TSS (NM_010753) -439 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding common_peak2_77_404_0.43777766302223_8.8806669292831_5.11037016289801 chr13 97435407 97436813 + 5.11037016289801 NA intron (NR_110432, intron 1 of 1) intron (NR_110432, intron 1 of 1) 1140 NR_110432 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 ENSMUSG00000078952|Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA common_peak1_59_542_-0.449539644020302_8.86003856579421_5.11011952522297 chr13 60737961 60738788 + 5.11011952522297 NA intron (NM_029653, intron 18 of 25) Charlie5|DNA|hAT-Charlie 47990 NM_199148 218275 Mm.222427 NM_199148 ENSMUSG00000042243 BC051665 - cDNA sequence BC051665 protein-coding common_peak2_117_722_0.334286879277064_9.66499527658965_5.10933882249143 chr6 38874107 38876816 + 5.10933882249143 NA intron (NM_010433, intron 1 of 14) intron (NM_010433, intron 1 of 14) 729 NM_010433 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding common_peak2_43_393_-0.535641765576068_8.35423093666834_5.10859718049179 chr7 79465390 79466651 + 5.10859718049179 NA intron (NM_017462, intron 1 of 22) CpG 253 NM_017462 18975 Mm.3616 NM_017462 ENSMUSG00000039176 Polg AA409516|PolgA polymerase (DNA directed), gamma protein-coding common_peak1_22_60_1.00772346653062_6.4345990708282_5.10837351156848 chr10 83001706 83002164 + 5.10837351156848 NA intron (NM_021439, intron 1 of 2) MIR3|SINE|MIR 16438 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding unique_peak2_22_60_1.00772346653062_6.4345990708282_5.10837351156848 chr16 4718805 4719432 + 5.10837351156848 NA 5' UTR (NM_026393, exon 1 of 6) 5' UTR (NM_026393, exon 1 of 6) 238 NM_001290763 67824 Mm.28451 NM_026393 ENSMUSG00000063445 Nmral1 1110025F24Rik|AI256624 NmrA-like family domain containing 1 protein-coding common_peak1_401_3685_0.153450171858648_11.92456544156_5.10718493078278 chr1 40465041 40468601 + 5.10718493078278 NA intron (NM_008365, intron 1 of 10) (CA)n|Simple_repeat|Simple_repeat 815 NM_008365 16182 Mm.253664 NM_008365 ENSMUSG00000026070 Il18r1 Il18ralpha|Il1rrp interleukin 18 receptor 1 protein-coding common_peak1_20_51_1.07703492565741_6.23895718096979_5.10716760483663 chr5 53490625 53490912 + 5.10716760483663 NA Intergenic Intergenic -65011 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak1_418_4761_-0.142765474953649_12.1459691677935_5.10597191946656 chr8 120485615 120488325 + 5.10597191946656 NA Intergenic Intergenic -1896 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_310_3367_-0.17057703193233_11.6323879071002_5.10588209454504 chr1 105989399 105992710 + 5.10588209454504 NA exon (NM_001122676, exon 1 of 14) exon (NM_001122676, exon 1 of 14) 648 NM_001122675 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding common_peak1_259_2087_0.202233146135724_11.1290225696377_5.10480644952244 chr14 60731709 60734504 + 5.10480644952244 NA 5' UTR (NM_001310594, exon 1 of 10) 5' UTR (NM_001310594, exon 1 of 10) 202 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak1_38_347_-0.570000046240868_8.1579434727283_5.10396294406164 chr6 87916161 87917009 + 5.10396294406164 NA intron (NM_173737, intron 2 of 6) Lx8|LINE|L1 2609 NM_173737 232210 Mm.246241 NM_173737 ENSMUSG00000030060 Hmces 8430410A17Rik|C85376 5-hydroxymethylcytosine (hmC) binding, ES cell specific protein-coding common_peak2_122_764_0.326261843638695_9.74244685939936_5.10354971024388 chr2 25499949 25501826 + 5.10354971024388 NA promoter-TSS (NM_027062) promoter-TSS (NM_027062) 109 NM_013908 30839 Mm.29170 NM_013908 ENSMUSG00000015095 Fbxw5 AI159739|Fbw5 F-box and WD-40 domain protein 5 protein-coding common_peak2_139_912_0.300199286912024_9.98457069344023_5.10318036761202 chr17 24894505 24897076 + 5.10318036761202 NA promoter-TSS (NM_019730) promoter-TSS (NM_019730) 670 NM_023260 79044 Mm.328851 NM_023260 ENSMUSG00000038880 Mrps34 0610007F04Rik|5330430D13Rik|AV001970|Tce2 mitochondrial ribosomal protein S34 protein-coding common_peak1_94_886_-0.344320504025852_9.62063004228814_5.10300907350625 chr2 18391821 18393083 + 5.10300907350625 NA exon (NM_007869, exon 1 of 12) exon (NM_007869, exon 1 of 12) 378 NM_001190817 13418 Mm.246674 NM_007869 ENSMUSG00000026740 Dnajc1 4733401K02Rik|AA960110|D230036H06Rik|Dnajl1|ERdj1|ERj1p|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding common_peak2_439_4141_0.145016113724472_12.0886198950827_5.10168646923755 chr17 50508482 50514217 + 5.10168646923755 NA intron (NM_013880, intron 1 of 5) intron (NM_013880, intron 1 of 5) 1802 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak2_57_522_-0.455391510548017_8.80297138097293_5.10149584673524-2 chr7 127707735 127709409 + 5.10149584673524 NA promoter-TSS (NR_030428) promoter-TSS (NR_030428) 85 NR_030428 791073 NR_030428 ENSMUSG00000076454 Mir762 Mirn762|mir-762|mmu-mir-762 microRNA 762 ncRNA common_peak2_57_522_-0.455391510548017_8.80297138097293_5.10149584673524 chr2 164849209 164851031 + 5.10149584673524 NA intron (NM_011125, intron 8 of 15) AT_rich|Low_complexity|Low_complexity 7588 NM_011125 18830 Mm.6105 NM_011125 ENSMUSG00000017754 Pltp Bpife|OD107 phospholipid transfer protein protein-coding common_peak2_403_3709_0.152869344470004_11.9336381437432_5.1001509600197 chr4 137364694 137371311 + 5.1001509600197 NA Intergenic Intergenic -10243 NM_001243769 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak2_141_1380_-0.271725747224677_10.2956347306457_5.09972942010138 chr7 119834918 119837651 + 5.09972942010138 NA intron (NM_001004187, intron 12 of 12) Lx5b|LINE|L1 42097 NM_001004187 434234 Mm.38237 NM_028129 ENSMUSG00000030924 2610020H08Rik - RIKEN cDNA 2610020H08 gene protein-coding common_peak2_88_825_-0.356979602655258_9.51150817009182_5.09916503533321 chr11 69039496 69042065 + 5.09916503533321 NA Intergenic Intergenic -4857 NM_011496 20877 Mm.3488 NM_011496 ENSMUSG00000020897 Aurkb AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5 aurora kinase B protein-coding common_peak2_140_1369_-0.272694574268586_10.2836128907136_5.0991269361687 chr4 41274300 41276156 + 5.0991269361687 NA promoter-TSS (NM_026872) promoter-TSS (NM_026872) -93 NM_026872 68926 Mm.41864 NM_026872 ENSMUSG00000028433 Ubap2 1190005K07Rik|AA408600|AU045235|UBAP-2|mKIAA1491 ubiquitin-associated protein 2 protein-coding common_peak1_220_2274_-0.209109653924417_11.0470960030112_5.09840616780482 chr10 96348224 96350866 + 5.09840616780482 NA Intergenic Intergenic 123338 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_294_2464_0.186260060654872_11.3605019615927_5.09658026047004 chr10 22730440 22732850 + 5.09658026047004 NA promoter-TSS (NM_011603) promoter-TSS (NM_011603) -198 NM_011603 237336 Mm.86670 NM_011603 ENSMUSG00000071359 Tbpl1 4732475G08|AW011832|AW491032|D18347|STD|TLF|TRF2|TRP|Tlp TATA box binding protein-like 1 protein-coding common_peak2_105_998_-0.321986791162949_9.80334747221094_5.09619451568776 chr8 26014727 26016234 + 5.09619451568776 NA exon (NM_008033, exon 1 of 9) exon (NM_008033, exon 1 of 9) 121 NM_008033 14272 Mm.3496 NM_008033 ENSMUSG00000015994 Fnta FTA farnesyltransferase, CAAX box, alpha protein-coding common_peak2_78_725_-0.381726646882434_9.31296241455453_5.0954346282773 chr13 51963411 51965332 + 5.0954346282773 NA Intergenic Intergenic 117696 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak1_35_320_-0.595131814063279_8.02886358009066_5.09519488720148 chr2 60877508 60878166 + 5.09519488720148 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 3601 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_35_320_-0.595131814063279_8.02886358009066_5.09519488720148-2 chr5 64387262 64388019 + 5.09519488720148 NA Intergenic ORR1D2-int|LTR|ERVL-MaLR 80302 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA common_peak1_129_825_0.313528860099806_9.84676240146935_5.09483578881373 chr5 115529803 115531000 + 5.09483578881373 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 23725 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak2_60_283_0.514772331542291_8.40713328527583_5.09478399950764 chr2 114174564 114175515 + 5.09478399950764 NA intron (NM_001290788, intron 1 of 33) intron (NM_001290788, intron 1 of 33) 300 NM_009702 11834 Mm.2545 NM_009702 ENSMUSG00000040383 Aqr AW495846|mKIAA0560 aquarius protein-coding unique_peak2_22_208_-0.768898327987372_7.3229099680872_5.09439499997923 chr7 45866031 45866971 + 5.09439499997923 NA exon (NM_008172, exon 1 of 12) exon (NM_008172, exon 1 of 12) 180 NM_008172 14814 Mm.322594 NM_008172 ENSMUSG00000002771 Grin2d GluN2D|NMDAR2D|NR2D glutamate receptor, ionotropic, NMDA2D (epsilon 4) protein-coding unique_peak2_8_92_-1.26108576042172_5.90861593089717_5.09341948656499 chr1 146805331 146806044 + 5.09341948656499 NA intron (NM_001145807, intron 6 of 7) intron (NM_001145807, intron 6 of 7) 308000 NM_001145807 215378 Mm.441817 NM_153539 ENSMUSG00000035131 Brinp3 B830045N13Rik|Fam5c bone morphogenetic protein/retinoic acid inducible neural specific 3 protein-coding unique_peak2_32_110_0.782904081310773_7.18586790700549_5.09311202849624 chr12 40446065 40446847 + 5.09311202849624 NA promoter-TSS (NM_172575) promoter-TSS (NM_172575) 403 NM_172803 238130 Mm.341423 NM_172803 ENSMUSG00000035954 Dock4 5330406C03|6330411N01Rik|AF263288|C030023J22|mKIAA0716 dedicator of cytokinesis 4 protein-coding unique_peak2_20_191_-0.807487856922658_7.18121857225983_5.09311202849624 chr12 51543132 51544527 + 5.09311202849624 NA Intergenic Intergenic -49512 NM_007728 12810 Mm.21325 NM_007728 ENSMUSG00000020953 Coch AW122937|Coch-5B2|D12H14S564E cochlin protein-coding unique_peak2_20_191_-0.807487856922658_7.18121857225983_5.09311202849624-2 chr17 44188318 44189291 + 5.09311202849624 NA 5' UTR (NM_172621, exon 1 of 6) 5' UTR (NM_172621, exon 1 of 6) 232 NM_172621 224796 Mm.37666 NM_172621 ENSMUSG00000023959 Clic5 5730531E12Rik|B330005L24|Gm322|jbg chloride intracellular channel 5 protein-coding common_peak1_70_353_0.46555399576402_8.70038254796501_5.09200841538292 chr1 152624522 152625780 + 5.09200841538292 NA promoter-TSS (NM_016846) promoter-TSS (NM_016846) -40 NM_016846 19731 Mm.245270 NM_016846 ENSMUSG00000026482 Rgl1 Rgl|mKIAA0959 ral guanine nucleotide dissociation stimulator,-like 1 protein-coding common_peak1_74_382_0.44894912636471_8.80567514510731_5.09079980071524 chr2 29670739 29671904 + 5.09079980071524 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 51601 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_28_89_0.856810218182893_6.92025820542112_5.08994273528045 chr6 54151245 54151924 + 5.08994273528045 NA intron (NM_001163640, intron 1 of 12) intron (NM_001163640, intron 1 of 12) 111652 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak2_28_89_0.856810218182893_6.92025820542112_5.08994273528045 chr10 20148845 20149595 + 5.08994273528045 NA intron (NM_001198635, intron 1 of 17) CpG 300 NM_001198635 17761 Mm.20928 NM_008635 ENSMUSG00000019996 Map7 E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste microtubule-associated protein 7 protein-coding common_peak1_107_639_0.353504094324945_9.49868014204984_5.08841751556935 chr13 120299307 120300840 + 5.08841751556935 NA promoter-TSS (NM_001037925) promoter-TSS (NM_001037925) -319 NM_001037925 625360 Mm.327506 NM_001037925 ENSMUSG00000094796 BC147527 - cDNA sequence BC147527 protein-coding unique_peak2_32_294_-0.627251196588325_7.89094554595504_5.08732295608718 chrX 105079360 105080587 + 5.08732295608718 NA exon (NM_026312, exon 2 of 6) exon (NM_026312, exon 2 of 6) 217 NM_026312 67683 Mm.273405 NM_026312 ENSMUSG00000031226 Pbdc1 2610029G23Rik polysaccharide biosynthesis domain containing 1 protein-coding common_peak2_32_294_-0.627251196588325_7.89094554595504_5.08732295608718 chr10 80164363 80165205 + 5.08732295608718 NA intron (NR_038088, intron 1 of 4) CpG -3057 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding common_peak2_55_503_-0.464102862295634_8.7452284923521_5.08553678854938 chr9 22156206 22157627 + 5.08553678854938 NA promoter-TSS (NM_001082532) promoter-TSS (NM_001082532) 70 NM_001082532 66268 Mm.28924 NM_025457 ENSMUSG00000010607 Pigyl 1810008A14Rik|PIG-Y|Pigy phosphatidylinositol glycan anchor biosynthesis, class Y-like protein-coding unique_peak2_55_503_-0.464102862295634_8.7452284923521_5.08553678854938 chr4 145274268 145276241 + 5.08553678854938 NA intron (NM_009401, intron 11 of 12) intron (NM_009401, intron 11 of 12) -28384 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_453_5228_-0.135762296672755_12.2844382065105_5.08539924789548 chr9 65532963 65537039 + 5.08539924789548 NA Intergenic B1_Mur4|SINE|Alu 45086 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_50_217_0.579486452350531_8.05792755095219_5.08471004174101 chr10 18946470 18947466 + 5.08471004174101 NA Intergenic Lx8|LINE|L1 64995 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak2_233_1817_0.215553792753393_10.9359133805708_5.08384643156869 chr11 69880192 69882237 + 5.08384643156869 NA promoter-TSS (NM_153143) promoter-TSS (NM_153143) -229 NM_153143 216858 Mm.239498 NM_153143 ENSMUSG00000046731 Kctd11 AF465352|Ren potassium channel tetramerisation domain containing 11 protein-coding common_peak2_109_1039_-0.314464483456183_9.86513557130036_5.08288859704536 chr9 5307797 5310195 + 5.08288859704536 NA intron (NM_007609, intron 1 of 8) intron (NM_007609, intron 1 of 8) 147 NM_007609 12363 Mm.1569 NM_007609 ENSMUSG00000033538 Casp4 CASP-11|CASP-4|Casp11|Caspl|ich-3 caspase 4, apoptosis-related cysteine peptidase protein-coding common_peak2_79_419_0.430113332337365_8.92930218383481_5.08266435997744 chr11 49971165 49973517 + 5.08266435997744 NA intron (NM_029004, intron 11 of 13) intron (NM_029004, intron 11 of 13) -52990 NM_021540 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak1_42_167_0.65340974747519_7.71902229651636_5.0823420628465 chr15 99329773 99330469 + 5.0823420628465 NA intron (NM_001310622, intron 5 of 25) intron (NM_001310622, intron 5 of 25) 34712 NM_018786 54614 Mm.358668 NM_018786 ENSMUSG00000023007 Prpf40b 2610317D23Rik|Hypc pre-mRNA processing factor 40B protein-coding common_peak2_42_167_0.65340974747519_7.71902229651636_5.0823420628465 chr11 75173095 75174323 + 5.0823420628465 NA promoter-TSS (NR_029546) promoter-TSS (NR_029546) 27 NR_029546 387150 NR_029546 ENSMUSG00000065537 Mir132 Mirn132|mir-132|mmu-mir-132 microRNA 132 ncRNA common_peak1_48_204_0.597396137405238_7.97817816820807_5.08208384688646-2 chr3 105910388 105911346 + 5.08208384688646 NA intron (NM_027025, intron 1 of 6) intron (NM_027025, intron 1 of 6) 6446 NM_009631 11542 Mm.235024 NM_009631 ENSMUSG00000000562 Adora3 A3AR|A3R|AA3R|ARA3|Gpcr2 adenosine A3 receptor protein-coding common_peak1_48_204_0.597396137405238_7.97817816820807_5.08208384688646 chr11 59948129 59948947 + 5.08208384688646 NA promoter-TSS (NR_045273) promoter-TSS (NR_045273) 324 NM_138675 192191 Mm.125288 NM_138675 ENSMUSG00000061650 Med9 BC019367|Med25 mediator complex subunit 9 protein-coding common_peak1_98_566_0.374249538871936_9.3343296943782_5.08158580732498 chr9 31210753 31211867 + 5.08158580732498 NA intron (NM_009691, intron 1 of 15) CpG 505 NM_001102455 11804 Mm.19133 NM_009691 ENSMUSG00000031996 Aplp2 AI790698|APLP-2 amyloid beta (A4) precursor-like protein 2 protein-coding common_peak2_84_457_0.412438059755548_9.04542281797472_5.08150263171202 chr17 80563417 80565223 + 5.08150263171202 NA promoter-TSS (NM_001033443) promoter-TSS (NM_001033443) -486 NM_001033443 381113 Mm.329216 NM_001033443 ENSMUSG00000033966 Cdkl4 AU067824|Gm942 cyclin-dependent kinase-like 4 protein-coding common_peak1_42_383_-0.539235330467205_8.31534483548755_5.08093472122853 chr5 54044949 54045693 + 5.08093472122853 NA intron (NM_001081103, intron 1 of 11) L1MC1|LINE|L1 46798 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak2_44_179_0.634325541234957_7.80901586694715_5.08064434272969 chr2 122426249 122427024 + 5.08064434272969 NA intron (NM_172980, intron 1 of 18) MT2A|LTR|ERVL 159 NM_172980 269346 Mm.29510 NM_172980 ENSMUSG00000027219 Slc28a2 2010208B10Rik|B430217P18|BB152493|Cnt2 solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 protein-coding common_peak1_44_401_-0.524873053614296_8.38861516437178_5.07983254095773 chr4 53011540 53012308 + 5.07983254095773 NA promoter-TSS (NM_025623) promoter-TSS (NM_025623) 0 NM_025623 66536 Mm.38244 NM_025623 ENSMUSG00000015247 Nipsnap3b 2700063N13Rik|Nipsnap3a nipsnap homolog 3B (C. elegans) protein-coding common_peak2_216_1644_0.226346445377173_10.7970450913112_5.07733621825092 chr7 109517829 109520374 + 5.07733621825092 NA promoter-TSS (NM_011975) promoter-TSS (NM_011975) -94 NM_011975 26451 Mm.305750 NM_011975 ENSMUSG00000046364 Rpl27a L27'|L27A|L29 ribosomal protein L27A protein-coding common_peak1_71_360_0.462054957358209_8.72688250556627_5.07719736820437 chr13 43365132 43365997 + 5.07719736820437 NA Intergenic CpG -5152 NM_178848 68346 Mm.35325 NM_178848 ENSMUSG00000054021 Sirt5 0610012J09Rik|1500032M05Rik|AV001953 sirtuin 5 protein-coding common_peak2_67_618_-0.417034715867381_9.06527824128057_5.07680973270861 chr7 143665790 143667958 + 5.07680973270861 NA non-coding (NR_131763, exon 6 of 6) non-coding (NR_131763, exon 6 of 6) -17210 NM_023680 79202 Mm.261384 NM_023680 ENSMUSG00000010751 Tnfrsf22 2810028K06Rik|C130035G06Rik|SOBa|Tnfrh2|Tnfrsf1al2|mDcTrailr2 tumor necrosis factor receptor superfamily, member 22 protein-coding common_peak1_14_27_1.37468919935374_5.49469952173448_5.07341998314802 chr15 84686376 84686788 + 5.07341998314802 NA intron (NM_146061, intron 1 of 7) intron (NM_146061, intron 1 of 7) 5584 NM_146061 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding unique_peak1_14_27_1.37468919935374_5.49469952173448_5.07341998314802 chr9 50698894 50699231 + 5.07341998314802 NA intron (NM_001311069, intron 5 of 19) CpG 28922 NM_178118 330938 Mm.82598 NM_178118 ENSMUSG00000032064 Dixdc1 4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735 DIX domain containing 1 protein-coding common_peak2_430_4033_0.146560334535286_12.0512755358806_5.07184185137819 chr11 86756000 86759347 + 5.07184185137819 NA promoter-TSS (NM_001003908) promoter-TSS (NM_001003908) -181 NM_001003908 67300 Mm.254588 NM_001003908 ENSMUSG00000047126 Cltc 3110065L21Rik|CHC|R74732 clathrin, heavy polypeptide (Hc) protein-coding common_peak1_46_420_-0.514545335640378_8.46040375524621_5.07085368831406 chr19 40662081 40662905 + 5.07085368831406 NA intron (NM_009848, intron 1 of 9) B2_Mm2|SINE|B2 2723 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak1_64_589_-0.427656623916308_8.99074283229105_5.07077668441476 chr15 103453759 103454857 + 5.07077668441476 NA intron (NM_153505, intron 1 of 30) intron (NM_153505, intron 1 of 30) 483 NM_153505 105855 Mm.30805 NM_153505 ENSMUSG00000022488 Nckap1l 4930568P13Rik|AI463083|Hem1|Hemp1 NCK associated protein 1 like protein-coding common_peak1_64_589_-0.427656623916308_8.99074283229105_5.07077668441476-2 chr9 13323233 13324200 + 5.07077668441476 NA Intergenic Intergenic 76737 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding common_peak1_27_250_-0.684978803932847_7.62905415198435_5.07007811420491 chr7 19664486 19664989 + 5.07007811420491 NA intron (NM_019649, intron 1 of 13) intron (NM_019649, intron 1 of 13) 293 NM_019649 56457 Mm.290960 NM_019649 ENSMUSG00000002981 Clptm1 HS9|N14 cleft lip and palate associated transmembrane protein 1 protein-coding common_peak1_27_250_-0.684978803932847_7.62905415198435_5.07007811420491-2 chrX 51204738 51205306 + 5.07007811420491 NA intron (NM_134163, intron 1 of 7) CpG 968 NM_001310515 171170 Mm.295324 NM_134163 ENSMUSG00000036109 Mbnl3 A530038J18Rik|AI661274|CHCR|E430034C16Rik|MBLX|MBLX39|MBXL muscleblind-like 3 (Drosophila) protein-coding common_peak2_113_1081_-0.308373753090285_9.92529790728167_5.06931961890663 chr10 42477452 42479221 + 5.06931961890663 NA exon (NM_145743, exon 1 of 13) exon (NM_145743, exon 1 of 13) 229 NM_145743 215951 Mm.89646 NM_145743 ENSMUSG00000038302 Lace1 CG8520 lactation elevated 1 protein-coding common_peak1_189_1914_-0.228046575350751_10.7891053891369_5.06868621722214 chr16 23127004 23128637 + 5.06868621722214 NA promoter-TSS (NM_145480) promoter-TSS (NM_145480) -90 NM_145480 106344 Mm.386835 NM_145480 ENSMUSG00000022881 Rfc4 A1|AI894123|AU040575|RFC37 replication factor C (activator 1) 4 protein-coding common_peak1_61_290_0.508419173012379_8.43908492941447_5.06855552180919 chr7 49119371 49120167 + 5.06855552180919 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) -126420 NM_175272 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak1_80_745_-0.376689737262359_9.35468695162406_5.06846897441273-2 chrX 75415795 75417178 + 5.06846897441273 NA promoter-TSS (NM_001166459) promoter-TSS (NM_001166459) 98 NM_010839 105886298 Mm.16366 NM_010839 ENSMUSG00000090110 Cmc4 Mtcp1nb|p8MTCP1 C-x(9)-C motif containing 4 protein-coding common_peak1_80_745_-0.376689737262359_9.35468695162406_5.06846897441273 chr11 16988143 16989835 + 5.06846897441273 NA intron (NM_019549, intron 5 of 9) intron (NM_019549, intron 5 of 9) 19729 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding unique_peak2_64_311_0.491512301470648_8.53115836959757_5.06798457351251 chr10 51479960 51481687 + 5.06798457351251 NA intron (NM_001291892, intron 1 of 8) intron (NM_001291892, intron 1 of 8) 211 NM_001291892 14727 Mm.439661 NM_008147 ENSMUSG00000062593 Lilr4b Gp49a|gp49 leukocyte immunoglobulin-like receptor, subfamily B, member 4B protein-coding common_peak1_64_311_0.491512301470648_8.53115836959757_5.06798457351251-2 chr8 107031077 107032035 + 5.06798457351251 NA intron (NM_126165, intron 1 of 10) CpG 230 NM_126165 116733 Mm.236004 NM_126165 ENSMUSG00000031913 Vps4a 4930589C15Rik|AI325971|AW553189 vacuolar protein sorting 4A protein-coding common_peak1_64_311_0.491512301470648_8.53115836959757_5.06798457351251 chr16 92620293 92621605 + 5.06798457351251 NA intron (NM_001111022, intron 5 of 6) intron (NM_001111022, intron 5 of 6) 76380 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_92_865_-0.347406493839134_9.58451996780716_5.06764856760486 chr13 93784858 93786520 + 5.06764856760486 NA intron (NM_009712, intron 1 of 7) RSINE1|SINE|B4 -5088 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak1_37_338_-0.578164948553098_8.11605898885979_5.06731880451674 chr19 11443624 11444254 + 5.06731880451674 NA intron (NM_021718, intron 1 of 6) intron (NM_021718, intron 1 of 6) 381 NM_021718 60361 Mm.33957 NM_021718 ENSMUSG00000056290 Ms4a4b AI463180|Chandra|Ly116 membrane-spanning 4-domains, subfamily A, member 4B protein-coding common_peak2_37_338_-0.578164948553098_8.11605898885979_5.06731880451674 chr16 96272551 96273489 + 5.06731880451674 NA intron (NM_001122993, intron 2 of 3) intron (NM_001122993, intron 2 of 3) -8012 NM_033149 93961 Mm.154783 NM_033149 ENSMUSG00000074892 B3galt5 1190002B21Rik|AU045265|b3Galt-V UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 protein-coding common_peak2_172_1215_0.261283018048964_10.3785690224681_5.06691846593624 chrX 142389141 142391609 + 5.06691846593624 NA 5' UTR (NM_207625, exon 1 of 16) 5' UTR (NM_207625, exon 1 of 16) 160 NM_001033600 50790 Mm.391337 NM_019477 ENSMUSG00000031278 Acsl4 9430020A05Rik|ACS4|AU018108|Facl4|Lacs4 acyl-CoA synthetase long-chain family member 4 protein-coding common_peak2_249_2617_-0.19351629174418_11.2574912360732_5.06642007573198 chr4 129334133 129336652 + 5.06642007573198 NA promoter-TSS (NM_025970) promoter-TSS (NM_025970) -22 NM_009030 19646 Mm.12145 NM_009030 ENSMUSG00000057236 Rbbp4 RBAP48|mRbAp48 retinoblastoma binding protein 4 protein-coding common_peak1_58_270_0.523377363687954_8.34383772319785_5.06524273951949 chr2 166594893 166595947 + 5.06524273951949 NA intron (NM_177782, intron 15 of 39) intron (NM_177782, intron 15 of 39) -77298 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA unique_peak2_27_84_0.877173813880224_6.84797784307781_5.06442831672807 chr15 59950364 59951201 + 5.06442831672807 NA Intergenic Intergenic 65836 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_27_84_0.877173813880224_6.84797784307781_5.06442831672807 chr6 130315252 130315689 + 5.06442831672807 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -7109 NM_024470 79410 Mm.482592 NM_024470 Klra23 Ly-49W1|Ly-49W2|Ly49W killer cell lectin-like receptor subfamily A, member 23 protein-coding common_peak2_27_84_0.877173813880224_6.84797784307781_5.06442831672807-2 chr3 95526576 95527182 + 5.06442831672807 NA promoter-TSS (NM_001267695) promoter-TSS (NM_001267695) 93 NM_001267695 13040 Mm.3619 NM_021281 ENSMUSG00000038642 Ctss Cats cathepsin S protein-coding common_peak2_27_84_0.877173813880224_6.84797784307781_5.06442831672807 chr12 103388587 103389194 + 5.06442831672807 NA intron (NM_026580, intron 1 of 5) CpG 208 NM_001177841 68149 Mm.127378 NM_026580 ENSMUSG00000021203 Otub2 2010015L18Rik|4930586I02Rik|AI413508|AW557219|OTB2|OTU2 OTU domain, ubiquitin aldehyde binding 2 protein-coding common_peak1_335_2921_0.171183425740425_11.5983321756737_5.06425709569155 chr6 31124812 31127687 + 5.06425709569155 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -63156 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_76_705_-0.386802832498114_9.27012295702212_5.06348984812496 chr5 72742143 72743256 + 5.06348984812496 NA intron (NM_001289495, intron 1 of 14) intron (NM_001289495, intron 1 of 14) -6097 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_429_4022_0.146389045692995_12.0472505454721_5.06266940123093 chr17 72917044 72919908 + 5.06266940123093 NA 5' UTR (NM_029999, exon 1 of 3) 5' UTR (NM_029999, exon 1 of 3) 171 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_171_1206_0.261741831871641_10.3680808766908_5.06150203011805 chr7 28391791 28393773 + 5.06150203011805 NA promoter-TSS (NM_019458) promoter-TSS (NM_019458) -92 NM_026042 67224 Mm.41647 NM_026042 ENSMUSG00000003444 Med29 2810405O22Rik|AU020902|Ixl mediator complex subunit 29 protein-coding common_peak1_31_285_-0.637005762466865_7.84136845554496_5.06129926487735-2 chr9 96739856 96740618 + 5.06129926487735 NA intron (NR_015511, intron 2 of 3) intron (NR_015511, intron 2 of 3) -8562 NM_175537 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak1_31_285_-0.637005762466865_7.84136845554496_5.06129926487735 chr6 65613750 65614660 + 5.06129926487735 NA intron (NM_001001495, intron 6 of 7) MTD|LTR|ERVL-MaLR 23807 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak1_138_1346_-0.273549354669701_10.2587594581275_5.05920905714618 chr8 105605089 105607045 + 5.05920905714618 NA intron (NM_001081241, intron 1 of 21) intron (NM_001081241, intron 1 of 21) 838 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Fam65a 2310066E14Rik|AI837433 family with sequence similarity 65, member A protein-coding common_peak1_26_241_-0.696655670435_7.57053540205709_5.05839281825403-2 chr4 59277288 59277832 + 5.05839281825403 NA Intergenic (TC)n|Simple_repeat|Simple_repeat 17509 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_26_241_-0.696655670435_7.57053540205709_5.05839281825403 chr14 27342441 27343093 + 5.05839281825403 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) 6730 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_26_241_-0.696655670435_7.57053540205709_5.05839281825403 chr11 99385640 99386781 + 5.05839281825403 NA exon (NM_010660, exon 7 of 8) exon (NM_010660, exon 7 of 8) 3154 NM_010660 16661 Mm.22662 NM_010660 ENSMUSG00000019761 Krt10 D130054E02Rik|K10|K1C1|Krt-1.10|Krt1-10 keratin 10 protein-coding common_peak2_87_814_-0.357633884051777_9.49183930709255_5.05791159992362 chr16 49773026 49775804 + 5.05791159992362 NA Intergenic Intergenic 75121 NM_028680 73916 Mm.241276 NM_028680 ENSMUSG00000032965 Ift57 4833420A15Rik|Esrrbl1|Hippi|MHS4R2 intraflagellar transport 57 protein-coding common_peak1_140_922_0.297078765933529_9.99872622061254_5.0562993351889 chr9 109038110 109039873 + 5.0562993351889 NA intron (NM_025858, intron 1 of 5) intron (NM_025858, intron 1 of 5) 424 NM_001284332 66940 Mm.196533 NM_025858 ENSMUSG00000025647 Shisa5 2310008D10Rik|6430628I05Rik|Scotin|mShisa5 shisa family member 5 protein-coding common_peak2_187_1359_0.246964773661029_10.5328733229682_5.05628178094748 chr4 147940451 147942216 + 5.05628178094748 NA exon (NM_029841, exon 1 of 3) exon (NM_029841, exon 1 of 3) 438 NM_029841 77034 Mm.183076 NM_029841 ENSMUSG00000044496 2510039O18Rik Kiaa2013 RIKEN cDNA 2510039O18 gene protein-coding common_peak2_117_723_0.332292829144976_9.66599230165569_5.05582171677576 chr4 130359269 130360956 + 5.05582171677576 NA promoter-TSS (NM_153160) promoter-TSS (NM_153160) -20 NM_025645 66585 Mm.423019 NM_025645 ENSMUSG00000074088 Snrnp40 0610009C03Rik|Prp8bp|Wdr57 small nuclear ribonucleoprotein 40 (U5) protein-coding common_peak1_117_723_0.332292829144976_9.66599230165569_5.05582171677576 chr17 12317847 12319414 + 5.05582171677576 NA promoter-TSS (NM_011948) promoter-TSS (NM_011948) 30 NM_011948 26407 Mm.28587 NM_011948 ENSMUSG00000014426 Map3k4 D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213 mitogen-activated protein kinase kinase kinase 4 protein-coding common_peak2_65_598_-0.422479933941549_9.01517222581801_5.05562281237845 chr5 76973560 76975433 + 5.05562281237845 NA promoter-TSS (NM_025691) promoter-TSS (NM_025691) -205 NM_025691 66661 Mm.296976 NM_025691 ENSMUSG00000036323 Srp72 5730576P14Rik|72kDa|AI132477|BC019196|C77589 signal recognition particle 72 protein-coding common_peak2_138_904_0.300210798822034_9.97187938138158_5.05502027251658 chr11 80428051 80429704 + 5.05502027251658 NA intron (NM_178616, intron 1 of 13) CpG 262 NM_178616 69077 Mm.260539 NM_178616 ENSMUSG00000017428 Psmd11 1700089D09Rik|1810019E17Rik|2610024G20Rik|2810055C24Rik|C78232|P44.5|S9 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 protein-coding common_peak2_296_2487_0.184818209836845_11.373179875049_5.05501862190009 chr11 116422416 116425562 + 5.05501862190009 NA Intergenic Intergenic -10105 NM_176902 319370 Mm.258466 NM_176902 ENSMUSG00000050628 Ubald2 1110014K08Rik|D030012E24Rik|Fam100b UBA-like domain containing 2 protein-coding common_peak2_212_2179_-0.212818357663988_10.9837032408323_5.05494520487164 chr9 27028996 27031385 + 5.05494520487164 NA promoter-TSS (NM_178027) promoter-TSS (NM_178027) 15 NM_178113 78658 Mm.251777 NM_178113 ENSMUSG00000035024 Ncapd3 2810487N22Rik|4632407J06Rik|AI195468|AU018739|B130055D15Rik|mKIAA0056 non-SMC condensin II complex, subunit D3 protein-coding common_peak2_34_121_0.750708376960647_7.30609152604321_5.05444228469382 chr14 54181077 54182189 + 5.05444228469382 NA Intergenic Intergenic 72296 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_12_124_-1.03697535120751_6.44729660905833_5.05421833471695 chr7 45394829 45395183 + 5.05421833471695 NA intron (NM_009224, intron 1 of 9) intron (NM_009224, intron 1 of 9) 736 NM_009224 20637 Mm.216386 NM_009224 ENSMUSG00000063511 Snrnp70 2700022N21Rik|3200002N22Rik|AI325098|R74807|Rnu1p70|Rnulp70|Snrp70|Srnp70|U1-70|U1-70K small nuclear ribonucleoprotein 70 (U1) protein-coding unique_peak2_12_124_-1.03697535120751_6.44729660905833_5.05421833471695 chrX 75749096 75749982 + 5.05421833471695 NA intron (NR_029443, intron 4 of 8) intron (NR_029443, intron 4 of 8) 15160 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA common_peak2_120_748_0.327744936176698_9.7126943765471_5.05355767789209 chr15 59647609 59650508 + 5.05355767789209 NA 5' UTR (NM_144549, exon 1 of 3) 5' UTR (NM_144549, exon 1 of 3) 404 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_362_3230_0.162936325523368_11.739233198027_5.05336871964952 chr10 17721267 17724977 + 5.05336871964952 NA promoter-TSS (NM_010828) promoter-TSS (NM_010828) -106 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak1_51_466_-0.485245183882373_8.62465614776847_5.05219402589655 chr9 96714299 96715088 + 5.05219402589655 NA intron (NM_175537, intron 2 of 2) intron (NM_175537, intron 2 of 2) 16982 NM_175537 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak2_126_1218_-0.289271716446168_10.1068465523971_5.05159831644834 chr9 50527579 50528984 + 5.05159831644834 NA intron (NM_011220, intron 1 of 5) intron (NM_011220, intron 1 of 5) 360 NM_011220 19286 Mm.35856 NM_011220 ENSMUSG00000032067 Pts PTPS 6-pyruvoyl-tetrahydropterin synthase protein-coding common_peak2_129_1250_-0.285339242646568_10.1461964528425_5.05107124634325 chr7 106642372 106645606 + 5.05107124634325 NA intron (NM_001277182, intron 1 of 3) L1_Mus3|LINE|L1 656 NM_001277179 434223 Mm.276443 NM_001277179 Gm1966 - predicted gene 1966 protein-coding common_peak2_31_105_0.794945119748325_7.12539301443736_5.0505780220104 chr7 130800264 130801127 + 5.0505780220104 NA intron (NM_001081038, intron 9 of 15) intron (NM_001081038, intron 9 of 15) 26626 NM_001081038 330660 Mm.271550 NM_001081038 ENSMUSG00000040298 Btbd16 E330040A16Rik BTB (POZ) domain containing 16 protein-coding common_peak1_31_105_0.794945119748325_7.12539301443736_5.0505780220104 chr16 97311487 97312343 + 5.0505780220104 NA Intergenic RMER10A|LTR|ERVL -44813 NM_019517 56175 Mm.97885 NM_019517 ENSMUSG00000040605 Bace2 1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP1|ASP21|BAE2|CDA13|CEAP1|DRAP beta-site APP-cleaving enzyme 2 protein-coding common_peak1_31_105_0.794945119748325_7.12539301443736_5.0505780220104-2 chr4 122933217 122934032 + 5.0505780220104 NA Intergenic B3|SINE|B2 27564 NM_029662 76574 Mm.331842 NM_029662 ENSMUSG00000028655 Mfsd2a 1700018O18Rik|Mfsd2|NLS1 major facilitator superfamily domain containing 2A protein-coding common_peak1_103_607_0.360718353570059_9.42828669022861_5.05007794517792 chr17 6996744 6998214 + 5.05007794517792 NA intron (NM_026611, intron 8 of 8) intron (NM_026611, intron 8 of 8) 18619 NM_026611 68195 Mm.181237 NM_026611 ENSMUSG00000094724 Rnaset2b 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2B protein-coding common_peak1_320_2753_0.175792091374094_11.515208889822_5.04996807793083 chr9 44492948 44496062 + 5.04996807793083 NA Intergenic Intergenic -4631 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak1_77_715_-0.384260016470039_9.29168576902924_5.04868003760207 chr16 46009392 46010475 + 5.04868003760207 NA 5' UTR (NM_001134480, exon 1 of 4) 5' UTR (NM_001134480, exon 1 of 4) 480 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding common_peak2_106_1007_-0.318309504144143_9.81812517142784_5.04844616873124 chr19 9898478 9900603 + 5.04844616873124 NA promoter-TSS (NM_016692) promoter-TSS (NM_016692) -7 NM_016692 16319 Mm.29755 NM_016692 ENSMUSG00000024660 Incenp 2700067E22Rik|AU019509|C130081E20|C77457 inner centromere protein protein-coding common_peak1_94_535_0.38238059981744_9.25727949036649_5.04795680623192 chr17 17234299 17235424 + 5.04795680623192 NA Intergenic Intergenic 113478 NM_011765 22759 Mm.436633 NM_011765 ENSMUSG00000095990 Zfp97 NGD16-4 zinc finger protein 97 protein-coding common_peak2_49_447_-0.494727418734863_8.55999121269017_5.04726578111744 chr19 21766617 21768654 + 5.04726578111744 NA Intergenic Intergenic -10705 NM_001033759 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak2_49_447_-0.494727418734863_8.55999121269017_5.04726578111744-2 chr7 35396038 35397460 + 5.04726578111744 NA promoter-TSS (NM_028120) promoter-TSS (NM_028120) 18 NM_178643 101831 Mm.389855 NM_178643 ENSMUSG00000030493 Faap24 AW124591|AW538696|C230052I12Rik Fanconi anemia core complex associated protein 24 protein-coding common_peak2_65_318_0.486519645082367_8.56067243630605_5.04726578111734-2 chr8 66860141 66861308 + 5.04726578111734 NA exon (NM_001163564, exon 1 of 8) exon (NM_001163564, exon 1 of 8) 507 NM_001163564 234344 Mm.334561 NM_001163564 ENSMUSG00000014907 Naf1 Gm174 nuclear assembly factor 1 ribonucleoprotein protein-coding common_peak2_65_318_0.486519645082367_8.56067243630605_5.04726578111734 chr17 17837700 17839175 + 5.04726578111734 NA exon (NM_001162909, exon 8 of 9) exon (NM_001162909, exon 8 of 9) 7462 NM_001162909 75202 Mm.227456 NM_029205 ENSMUSG00000080316 Spaca6 4930546H06Rik|9530079D04Rik|B230206P06Rik|Ncrna00085|SPACA6A|let-7e|mir-125a|mir-99b sperm acrosome associated 6 protein-coding common_peak2_166_1654_-0.24586889600662_10.5696810536913_5.04577632009843 chr5 138254940 138258674 + 5.04577632009843 NA intron (NM_001081108, intron 2 of 3) intron (NM_001081108, intron 2 of 3) 1325 NM_001081108 66096 Mm.206901 NM_001081108 ENSMUSG00000050552 Lamtor4 0910001L09Rik|AV006840 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 protein-coding common_peak2_126_800_0.316552261765334_9.80393456329138_5.04537405767008 chr14 27411524 27414349 + 5.04537405767008 NA Intergenic L1MC|LINE|L1 -15911 NM_028945 218850 Mm.247767 NM_028945 ENSMUSG00000040651 Fam208a 4732418E12|4933409E02Rik|D14Abb1e|MommeD6 family with sequence similarity 208, member A protein-coding unique_peak2_26_79_0.900279471952232_6.77206783086348_5.04401809632186 chr8 47989696 47990472 + 5.04401809632186 NA exon (NM_133791, exon 1 of 23) exon (NM_133791, exon 1 of 23) 467 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak1_15_149_-0.932565427370712_6.76253597681052_5.04401809632186-2 chr18 10532053 10532410 + 5.04401809632186 NA intron (NM_001083628, intron 18 of 32) ID_B1|SINE|B4 78121 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding common_peak1_15_149_-0.932565427370712_6.76253597681052_5.04401809632186 chr13 38050266 38050729 + 5.04401809632186 NA intron (NM_024242, intron 9 of 16) B1_Mm|SINE|Alu 13508 NM_024242 71340 Mm.297130 NM_024242 ENSMUSG00000021428 Riok1 3110046C13Rik|5430416A05Rik|Ad034 RIO kinase 1 (yeast) protein-coding common_peak1_413_3830_0.149836837162553_11.9784237290052_5.04385691562073 chr19 4213196 4215862 + 5.04385691562073 NA 5' UTR (NM_001310039, exon 1 of 3) 5' UTR (NM_001310039, exon 1 of 3) 140 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak1_96_905_-0.338028876682825_9.65435280170482_5.0434032596906 chr10 128498884 128499881 + 5.0434032596906 NA promoter-TSS (NM_172259) promoter-TSS (NM_172259) 135 NR_131151 654440 Mm.441262 NR_131150 ENSMUSG00000097353 A430046D13Rik - Riken cDNA A430046D13 gene ncRNA common_peak1_69_346_0.469266173131629_8.67342493914408_5.04241145005948 chr7 18884670 18885475 + 5.04241145005948 NA intron (NM_009402, intron 1 of 2) intron (NM_009402, intron 1 of 2) 382 NM_009402 21946 Mm.21855 NM_009402 ENSMUSG00000030413 Pglyrp1 PGRP|PGRP-S|Pglyrp|Tag7|Tasg7|Tnfsf3l peptidoglycan recognition protein 1 protein-coding common_peak2_246_1953_0.207154366503339_11.0357919352201_5.0416634354168 chr18 79061932 79066349 + 5.0416634354168 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 45251 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_66_607_-0.417383813293862_9.03923560679666_5.04136956881138 chr1 160306466 160307605 + 5.04136956881138 NA intron (NM_001038621, intron 2 of 8) intron (NM_001038621, intron 2 of 8) -11063 NR_035448 100316784 NR_035448 ENSMUSG00000089204 Mir1927 mmu-mir-1927 microRNA 1927 ncRNA common_peak1_107_1018_-0.317506146953507_9.83418526268906_5.04130771807792 chrX 74281452 74283530 + 5.04130771807792 NA promoter-TSS (NM_001290738) promoter-TSS (NM_001290738) -158 NM_001172154 69537 Mm.20169 NM_027109 ENSMUSG00000019088 Dnase1l1 2310005K03Rik|AI324885|Dnase1ll|Dnasex|Dnl1ll|G4.8 deoxyribonuclease 1-like 1 protein-coding common_peak1_51_224_0.568252364610251_8.09790737352216_5.04076059091167 chr10 13473705 13474838 + 5.04076059091167 NA exon (NM_001195065, exon 1 of 13) exon (NM_001195065, exon 1 of 13) 125 NM_001195065 215789 Mm.283359 NM_001033257 ENSMUSG00000062866 Phactr2 AV158170|BC012871 phosphatase and actin regulator 2 protein-coding common_peak2_83_774_-0.367353233990389_9.41437588316641_5.04012529720669 chr7 116092476 116094087 + 5.04012529720669 NA promoter-TSS (NM_019772) promoter-TSS (NM_019772) -99 NM_019772 56372 Mm.24231 NM_019772 ENSMUSG00000030663 1110004F10Rik Smacp|Smap|sid2057|sid2057p RIKEN cDNA 1110004F10 gene protein-coding common_peak2_73_375_0.451807110720129_8.7804924070377_5.03979919988938 chr13 44799232 44801022 + 5.03979919988938 NA intron (NM_001205044, intron 2 of 18) intron (NM_001205044, intron 2 of 18) 68856 NM_001205043 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding common_peak2_41_374_-0.546659830398388_8.27741687018405_5.03922349570998 chr14 55584617 55586098 + 5.03922349570998 NA promoter-TSS (NM_033146) promoter-TSS (NM_033146) -103 NM_033146 85308 Mm.40667 NM_033146 ENSMUSG00000022217 Emc9 1500005A01Rik|Cgi112|Fam158a ER membrane protein complex subunit 9 protein-coding common_peak1_271_2217_0.194941855557886_11.2125145779407_5.03860920447316 chr14 27428214 27430106 + 5.03860920447316 NA exon (NM_028945, exon 1 of 24) exon (NM_028945, exon 1 of 24) 313 NM_001114879 218850 Mm.247767 NM_028945 ENSMUSG00000040651 Fam208a 4732418E12|4933409E02Rik|D14Abb1e|MommeD6 family with sequence similarity 208, member A protein-coding unique_peak2_6_76_-1.43344641304969_5.55006333417006_5.03567809044837 chr9 41176530 41177203 + 5.03567809044837 NA Intergenic Intergenic -19372 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding unique_peak2_10_108_-1.13499889326933_6.20068487814226_5.03421538116577 chr11 29125111 29125691 + 5.03421538116577 NA Intergenic IAPEz-int|LTR|ERVK -5350 NM_027869 71701 Mm.211131 NM_027869 ENSMUSG00000020464 Pnpt1 1200003F12Rik|Old35|PNPase|Pnptl1 polyribonucleotide nucleotidyltransferase 1 protein-coding common_peak2_98_925_-0.333413919446071_9.6881614235372_5.03369366186965 chr15 80132865 80134284 + 5.03369366186965 NA intron (NM_025609, intron 1 of 10) CpG 420 NM_025609 66513 Mm.288245 NM_025609 ENSMUSG00000022414 Tab1 2310012M03Rik|Map3k7ip1|b2b449Clo TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding common_peak2_47_198_0.603763158734803_7.93850619991105_5.0328301044878-3 chr7 122329287 122330495 + 5.0328301044878 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 40766 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak2_47_198_0.603763158734803_7.93850619991105_5.0328301044878-2 chr4 127060483 127061596 + 5.0328301044878 NA promoter-TSS (NM_026670) promoter-TSS (NM_026670) 93 NM_026670 68310 Mm.273806 NM_026670 ENSMUSG00000043872 Zmym1 5830412B09Rik|AW209050 zinc finger, MYM domain containing 1 protein-coding common_peak2_47_198_0.603763158734803_7.93850619991105_5.0328301044878 chr12 71831025 71831816 + 5.0328301044878 NA intron (NM_026102, intron 1 of 25) CpG 352 NM_172464 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak2_33_302_-0.613025411312424_7.93666127781674_5.0328301044877 chr8 70438926 70439827 + 5.0328301044877 NA intron (NM_001004062, intron 1 of 13) CpG 197 NM_001004062 382056 Mm.227767 NM_001004062 ENSMUSG00000003575 Crtc1 AI413414|Mect1|R74955|TORC1|mKIAA0616 CREB regulated transcription coactivator 1 protein-coding unique_peak2_33_302_-0.613025411312424_7.93666127781674_5.0328301044877 chr17 17120892 17122040 + 5.0328301044877 NA promoter-TSS (NM_011765) promoter-TSS (NM_011765) 83 NM_011765 22759 Mm.436633 NM_011765 ENSMUSG00000095990 Zfp97 NGD16-4 zinc finger protein 97 protein-coding common_peak2_70_646_-0.404462356145491_9.13539072391976_5.0320109749812 chr7 28824752 28826421 + 5.0320109749812 NA intron (NM_016772, intron 1 of 9) intron (NM_016772, intron 1 of 9) 248 NM_016772 51798 Mm.291776 NM_016772 ENSMUSG00000053898 Ech1 AA617331 enoyl coenzyme A hydratase 1, peroxisomal protein-coding common_peak1_89_496_0.395688907188701_9.15494649515664_5.02976754579766 chr7 6171776 6173255 + 5.02976754579766 NA promoter-TSS (NM_028316) promoter-TSS (NM_028316) 2 NM_001146024 72667 Mm.274089 NM_028316 ENSMUSG00000044876 Zfp444 2810031J10Rik|6230401O10Rik|mFLJ00134 zinc finger protein 444 protein-coding common_peak1_225_1737_0.218919442544358_10.8726720880866_5.02947225217541 chr11 63988301 63991478 + 5.02947225217541 NA intron (NM_178379, intron 5 of 6) intron (NM_178379, intron 5 of 6) 25663 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak2_66_325_0.481815545918646_8.5896359271904_5.02791431211487 chr1 54660839 54662177 + 5.02791431211487 NA intron (NM_001081433, intron 20 of 27) MIRb|SINE|MIR -103824 NM_001163314 241062 Mm.103539 NM_175508 ENSMUSG00000073678 Pgap1 5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto post-GPI attachment to proteins 1 protein-coding unique_peak2_38_346_-0.5658484029704_8.15586765109306_5.02703203054362 chr5 21043114 21045542 + 5.02703203054362 NA intron (NM_011203, intron 1 of 17) intron (NM_011203, intron 1 of 17) 11469 NM_011203 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak2_38_346_-0.5658484029704_8.15586765109306_5.02703203054362 chrX 10215739 10216913 + 5.02703203054362 NA 5' UTR (NM_001177952, exon 1 of 17) 5' UTR (NM_001177952, exon 1 of 17) 127 NM_001177952 19893 Mm.247556 NM_011285 ENSMUSG00000031174 Rpgr Rp3h retinitis pigmentosa GTPase regulator protein-coding common_peak2_91_854_-0.348095183307038_9.56573301811974_5.02575813709721 chr14 70152767 70154355 + 5.02575813709721 NA TTS (NM_001004155) TTS (NM_001004155) 230 NM_146055 219158 Mm.218284 NM_146055 ENSMUSG00000033712 Ccar2 2610301G19Rik|Dbc1|mKIAA1967 cell cycle activator and apoptosis regulator 2 protein-coding common_peak2_100_945_-0.328848179733937_9.72127228347243_5.025448081814-2 chr3 89417907 89420327 + 5.025448081814 NA promoter-TSS (NM_016904) promoter-TSS (NM_016904) 566 NM_011368 20416 Mm.86595 NM_011368 ENSMUSG00000042626 Shc1 Shc|ShcA|p66|p66shc src homology 2 domain-containing transforming protein C1 protein-coding common_peak2_100_945_-0.328848179733937_9.72127228347243_5.025448081814 chr11 82990275 82992355 + 5.025448081814 NA intron (NM_172796, intron 1 of 4) intron (NM_172796, intron 1 of 4) 515 NM_172796 237886 Mm.270253 NM_172796 ENSMUSG00000069793 Slfn9 9830137M10Rik schlafen 9 protein-coding common_peak1_248_1974_0.206003447369804_11.0506386616367_5.02469206465798 chr8 11634505 11637067 + 5.02469206465798 NA promoter-TSS (NM_133971) promoter-TSS (NM_133971) -29 NM_001281974 102334 Mm.12459 NM_133971 ENSMUSG00000031508 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 protein-coding unique_peak2_16_157_-0.900244487202931_6.85365850457564_5.02382449304761-2 chr8 106802662 106804130 + 5.02382449304761 NA intron (NM_173037, intron 15 of 17) intron (NM_173037, intron 15 of 17) -66846 NM_008217 15118 Mm.56986 NM_008217 ENSMUSG00000031910 Has3 - hyaluronan synthase 3 protein-coding common_peak1_16_157_-0.900244487202931_6.85365850457564_5.02382449304761 chr1 152010411 152010794 + 5.02382449304761 NA intron (NM_197990, intron 1 of 5) intron (NM_197990, intron 1 of 5) 79718 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding unique_peak2_16_157_-0.900244487202931_6.85365850457564_5.02382449304761 chr3 129366707 129368155 + 5.02382449304761 NA Intergenic Intergenic -34682 NM_007934 13809 Mm.1193 NM_007934 ENSMUSG00000028024 Enpep 6030431M22Rik|APA|Bp-1/6C3|Ly-51|Ly51 glutamyl aminopeptidase protein-coding unique_peak1_12_20_1.53649151067582_5.16056317811667_5.02289296421223-2 chr9 114794281 114794683 + 5.02289296421223 NA intron (NM_027294, intron 2 of 3) intron (NM_027294, intron 2 of 3) -12489 NM_001252479 102545 Mm.35600 NM_133978 ENSMUSG00000032436 Cmtm7 AI481279|Cklfsf7|LNV CKLF-like MARVEL transmembrane domain containing 7 protein-coding unique_peak1_12_20_1.53649151067582_5.16056317811667_5.02289296421223 chr11 101885814 101886205 + 5.02289296421223 NA intron (NM_010791, intron 1 of 2) intron (NM_010791, intron 1 of 2) 8345 NM_010791 17285 Mm.3404 NM_010791 ENSMUSG00000001493 Meox1 AI385561|D330041M02Rik|Mox-1|Mox1 mesenchyme homeobox 1 protein-coding common_peak2_57_263_0.530881506340471_8.30983487252869_5.02262620876625 chr8 120680599 120682000 + 5.02262620876625 NA Intergenic Intergenic 12979 NM_001293559 12857 Mm.386758 NM_009941 ENSMUSG00000031818 Cox4i1 AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1 cytochrome c oxidase subunit IV isoform 1 protein-coding common_peak1_229_1778_0.216327906891024_10.9050147487127_5.0223485993791 chr12 102286976 102290434 + 5.0223485993791 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 5064 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_217_2236_-0.208994994343126_11.0228520438876_5.02192880832375 chr11 70645763 70648407 + 5.02192880832375 NA promoter-TSS (NM_024211) promoter-TSS (NM_024211) -46 NM_024211 67863 Mm.296082 NM_024211 ENSMUSG00000014606 Slc25a11 2310022P18Rik|2oxoc solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11 protein-coding common_peak2_101_955_-0.326583719666935_9.73757494814728_5.02184378267965 chr10 82622268 82624081 + 5.02184378267965 NA promoter-TSS (NM_001135568) promoter-TSS (NM_001135568) 54 NM_001135569 544717 Mm.334867 NM_001135567 ENSMUSG00000063320 1190007I07Rik - RIKEN cDNA 1190007I07 gene protein-coding common_peak2_387_4349_-0.148236699887333_12.0126813356798_5.02123378673176 chr17 27554049 27558507 + 5.02123378673176 NA promoter-TSS (NM_001039356) promoter-TSS (NM_001039356) -296 NM_001166536 15361 Mm.4438 NM_016660 ENSMUSG00000046711 Hmga1 AL023995|Hmga1a|Hmga1b|Hmgi|Hmgiy|Hmgy high mobility group AT-hook 1 protein-coding common_peak1_63_304_0.496812453047632_8.50107165897406_5.02114415091394 chr13 67332173 67333042 + 5.02114415091394 NA promoter-TSS (NM_177622) promoter-TSS (NM_177622) -47 NM_177622 218314 Mm.289695 NM_177622 ENSMUSG00000057842 Zfp595 A230042K10Rik|Rslcan23 zinc finger protein 595 protein-coding common_peak2_63_304_0.496812453047632_8.50107165897406_5.02114415091394 chr17 46649830 46651137 + 5.02114415091394 NA TTS (NM_001316742) TTS (NM_001316742) 145 NM_025611 66515 Mm.329078 NM_025611 ENSMUSG00000038545 Cul7 2510004L20Rik|AA409809|C230011P08Rik|p185|p193 cullin 7 protein-coding common_peak1_115_1101_-0.304020571685877_9.95389822272822_5.02107529759257 chr17 35916099 35916758 + 5.02107529759257 NA promoter-TSS (NM_001163818) promoter-TSS (NM_001163818) -59 NM_025878 66973 Mm.29484 NM_025878 ENSMUSG00000024436 Mrps18b 2400002C15Rik mitochondrial ribosomal protein S18B protein-coding common_peak1_161_1114_0.270126399371568_10.2578911944934_5.02014219328127 chr1 87755941 87756815 + 5.02014219328127 NA intron (NM_029846, intron 1 of 17) CpG 367 NM_001205392 77040 Mm.272972 NM_029846 ENSMUSG00000026289 Atg16l1 1500009K01Rik|Apg16l|Atg16l|WDR30 autophagy related 16-like 1 (S. cerevisiae) protein-coding common_peak2_24_224_-0.727765999080654_7.44989819167671_5.01977580367592 chr11 75240262 75241662 + 5.01977580367592 NA intron (NM_177708, intron 1 of 1) PB1D10|SINE|Alu 46969 NM_177708 237847 Mm.82661 NM_177708 ENSMUSG00000045287 Rtn4rl1 Ngr3|Ngrh2|Ngrl2 reticulon 4 receptor-like 1 protein-coding common_peak1_199_2027_-0.219989811307888_10.8758470313494_5.019413726223 chr12 17715121 17718096 + 5.019413726223 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 25794 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_326_2821_0.173374479085657_11.5491895121401_5.01799268373267 chr8 128684676 128688609 + 5.01799268373267 NA intron (NM_010578, intron 1 of 15) MIR|SINE|MIR 988 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_290_3115_-0.176006638544976_11.5174761987892_5.01621258380116 chr2 73461188 73465514 + 5.01621258380116 NA intron (NM_153138, intron 1 of 7) intron (NM_153138, intron 1 of 7) -9462 NM_001289722 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak2_50_456_-0.488379577930614_8.59186056609276_5.01571158922654 chr12 88360209 88361404 + 5.01571158922654 NA promoter-TSS (NM_028105) promoter-TSS (NM_028105) 24 NM_028105 72113 Mm.181387 NM_028105 ENSMUSG00000021044 Adck1 2610005A10Rik aarF domain containing kinase 1 protein-coding common_peak1_50_456_-0.488379577930614_8.59186056609276_5.01571158922654 chr1 9700353 9701152 + 5.01571158922654 NA promoter-TSS (NM_001290397) promoter-TSS (NM_001290397) -543 NM_008651 17864 Mm.479 NM_008651 ENSMUSG00000025912 Mybl1 A-myb|G1-419-6|repro9 myeloblastosis oncogene-like 1 protein-coding common_peak1_29_267_-0.657432757860069_7.73737281152774_5.0155735633976-2 chr19 53538712 53539286 + 5.0155735633976 NA intron (NM_001085390, intron 3 of 3) intron (NM_001085390, intron 3 of 3) 9681 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak1_29_267_-0.657432757860069_7.73737281152774_5.0155735633976-3 chr5 117119463 117119976 + 5.0155735633976 NA promoter-TSS (NM_001199685) promoter-TSS (NM_001199685) -410 NM_001199685 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding common_peak1_29_267_-0.657432757860069_7.73737281152774_5.0155735633976 chr11 67588307 67589016 + 5.0155735633976 NA intron (NM_001109657, intron 1 of 13) MIR3|SINE|MIR 2161 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_135_1313_-0.276376365789089_10.2215613774278_5.01548021034583 chr11 107011782 107012961 + 5.01548021034583 NA Intergenic Intergenic -12846 NM_010655 16647 Mm.12508 NM_010655 ENSMUSG00000018362 Kpna2 2410044B12Rik|IPOA1|PTAC58|Rch1 karyopherin (importin) alpha 2 protein-coding common_peak2_268_2186_0.195621616520915_11.1925483133085_5.01520240297167 chr2 160645687 160647346 + 5.01520240297167 NA intron (NM_009408, intron 1 of 20) CpG 619 NM_009408 21969 Mm.217233 NM_009408 ENSMUSG00000070544 Top1 AI467334|D130064I21Rik|Top-1 topoisomerase (DNA) I protein-coding unique_peak2_9_99_-1.1793342733303_6.05418905310957_5.0150680486592-4 chr6 72993207 72993919 + 5.0150680486592 NA Intergenic Intergenic -34815 NM_001190327 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding unique_peak2_9_99_-1.1793342733303_6.05418905310957_5.0150680486592-2 chr11 16984245 16984957 + 5.0150680486592 NA intron (NM_019549, intron 7 of 9) RMER13B|LTR|ERVK 24117 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding unique_peak2_9_99_-1.1793342733303_6.05418905310957_5.0150680486592-3 chr12 112848088 112848686 + 5.0150680486592 NA Intergenic Intergenic 12529 NM_019925 56696 Mm.20455 NM_019925 ENSMUSG00000021298 Gpr132 G2a G protein-coupled receptor 132 protein-coding unique_peak2_9_99_-1.1793342733303_6.05418905310957_5.0150680486592 chr10 18070108 18071059 + 5.0150680486592 NA intron (NM_009048, intron 1 of 19) intron (NM_009048, intron 1 of 19) 14643 NM_001111065 19707 Mm.4479 NM_009048 ENSMUSG00000019854 Reps1 BB161292 RalBP1 associated Eps domain containing protein protein-coding common_peak1_84_458_0.409291504438684_9.04699609563315_5.01455577150585 chr6 140423922 140425386 + 5.01455577150585 NA intron (NM_144920, intron 2 of 30) CpG-12548 555 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak1_251_2006_0.204008880961876_11.0728293418436_5.01382571587634 chr11 98794293 98796808 + 5.01382571587634 NA promoter-TSS (NM_028722) promoter-TSS (NM_028722) -219 NM_028722 74026 Mm.258352 NM_028722 ENSMUSG00000052915 Msl1 2810017F12Rik|4121402D02Rik|4930463F05Rik|AA682082|Msl-1 male-specific lethal 1 homolog (Drosophila) protein-coding common_peak2_40_364_-0.550309388701954_8.2365979594164_5.0136875329906 chr4 43024995 43026043 + 5.0136875329906 NA 5' UTR (NM_020035, exon 1 of 10) 5' UTR (NM_020035, exon 1 of 10) 255 NM_020035 56703 Mm.143738 NM_020035 ENSMUSG00000028454 Pigo PIG-O phosphatidylinositol glycan anchor biosynthesis, class O protein-coding common_peak1_40_364_-0.550309388701954_8.2365979594164_5.0136875329906 chr9 44237159 44237701 + 5.0136875329906 NA Intergenic Intergenic -3247 NM_001081369 270150 Mm.347681 NM_001081369 ENSMUSG00000070306 Ccdc153 - coiled-coil domain containing 153 protein-coding common_peak1_176_1765_-0.236608706453357_10.6679652744218_5.01350627797851 chr6 114881810 114883609 + 5.01350627797851 NA intron (NM_177683, intron 2 of 4) intron (NM_177683, intron 2 of 4) 39043 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak2_19_181_-0.81666041256792_7.09946443391474_5.01319638683104-3 chrX 7858573 7860134 + 5.01319638683104 NA intron (NM_001290536, intron 2 of 8) intron (NM_001290536, intron 2 of 8) 17271 NM_001290537 54644 Mm.142827 NM_138604 ENSMUSG00000031154 Otud5 AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7 OTU domain containing 5 protein-coding unique_peak2_19_181_-0.81666041256792_7.09946443391474_5.01319638683104-2 chr8 107424422 107425074 + 5.01319638683104 NA exon (NM_026277, exon 2 of 9) exon (NM_026277, exon 2 of 9) 290 NM_026277 67619 Mm.36817 NM_026277 ENSMUSG00000003848 Nob1 1700021I09Rik|ART-4|Nob1p|Psmd8bp1 NIN1/RPN12 binding protein 1 homolog protein-coding unique_peak2_19_181_-0.81666041256792_7.09946443391474_5.01319638683104 chr6 99273908 99274829 + 5.01319638683104 NA intron (NM_053202, intron 2 of 18) intron (NM_053202, intron 2 of 18) -7853 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_17_165_-0.870354069474257_6.9398623966098_5.0128952623237 chr15 74923972 74924416 + 5.0128952623237 NA Intergenic Intergenic -30857 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding unique_peak2_17_165_-0.870354069474257_6.9398623966098_5.0128952623237 chr11 97432731 97433868 + 5.0128952623237 NA Intergenic Intergenic -16861 NM_021493 58996 Mm.394118 NM_021493 ENSMUSG00000049807 Arhgap23 A330041B18Rik Rho GTPase activating protein 23 protein-coding common_peak1_17_165_-0.870354069474257_6.9398623966098_5.0128952623237-2 chr2 166700956 166701394 + 5.0128952623237 NA intron (NR_105783, intron 2 of 2) L2a|LINE|L2 12657 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding unique_peak2_17_165_-0.870354069474257_6.9398623966098_5.0128952623237-2 chr2 154354316 154355296 + 5.0128952623237 NA intron (NM_025876, intron 6 of 13) IAPEz-int|LTR|ERVK 17913 NM_025876 66971 Mm.289427 NM_025876 ENSMUSG00000027487 Cdk5rap1 2310066P17Rik CDK5 regulatory subunit associated protein 1 protein-coding common_peak1_113_690_0.338569130348272_9.60182646556239_5.01253294123605 chr18 23807963 23809581 + 5.01253294123605 NA intron (NM_153058, intron 1 of 6) intron (NM_153058, intron 1 of 6) 4802 NM_153058 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak2_262_2772_-0.186790881764017_11.3438364601575_5.01149273013138 chr4 109664564 109667799 + 5.01149273013138 NA promoter-TSS (NM_007671) promoter-TSS (NM_007671) 575 NM_001301368 12580 Mm.1912 NM_007671 ENSMUSG00000028551 Cdkn2c C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) protein-coding common_peak2_91_512_0.38887041085917_9.19725022103664_5.01050074752249 chrX 140519549 140521573 + 5.01050074752249 NA Intergenic Intergenic 22107 NR_122039 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding common_peak1_18_173_-0.842579292451838_7.02165384962281_5.00974656711961 chr5 140516151 140516621 + 5.00974656711961 NA intron (NM_021528, intron 1 of 1) PB1D10|SINE|Alu 10777 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding unique_peak2_18_173_-0.842579292451838_7.02165384962281_5.00974656711961 chr2 144244994 144246475 + 5.00974656711961 NA Intergenic Intergenic 20468 NR_030762 100313519 Mm.453538 NR_030762 ENSMUSG00000077714 Snord17 MBI-43 small nucleolar RNA, C/D box 17 snoRNA common_peak2_76_704_-0.384757906513089_9.26910049402961_5.00957378073538 chrX 38189096 38190808 + 5.00957378073538 NA 5' UTR (NM_020256, exon 1 of 2) 5' UTR (NM_020256, exon 1 of 2) 159 NM_001079513 56805 Mm.391248 NM_020256 ENSMUSG00000048047 Zbtb33 AW260253|E130014G12Rik|Kaiso|Znf-kaiso zinc finger and BTB domain containing 33 protein-coding common_peak2_436_4109_0.144098310541613_12.0769718338399_5.00912559886429 chr7 16841102 16846430 + 5.00912559886429 NA exon (NM_178900, exon 1 of 18) exon (NM_178900, exon 1 of 18) 701 NM_178900 101540 Mm.1881 NM_178900 ENSMUSG00000041187 Prkd2 AI325941|PKD2 protein kinase D2 protein-coding common_peak1_42_382_-0.535473411671006_8.31346387608945_5.00784189567993 chr11 98357629 98358281 + 5.00784189567993 NA promoter-TSS (NM_021547) promoter-TSS (NM_021547) 328 NR_045477 69338 Mm.398308 NR_045477 ENSMUSG00000085944 1700003D09Rik - RIKEN cDNA 1700003D09 gene ncRNA common_peak1_157_1077_0.274569939547167_10.2114264325261_5.00762084476576 chr11 88613122 88614924 + 5.00762084476576 NA intron (NM_054043, intron 5 of 13) LTR67B|LTR|ERVL -5228 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_75_390_0.44256402846225_8.83230681153848_5.00692402548746 chr11 31870869 31871737 + 5.00692402548746 NA 5' UTR (NM_026252, exon 1 of 10) 5' UTR (NM_026252, exon 1 of 10) 363 NM_026252 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding common_peak1_58_531_-0.449756030459364_8.83040442027151_5.00692402548746 chr16 43654206 43655284 + 5.00692402548746 NA intron (NM_001146325, intron 3 of 3) intron (NM_001146325, intron 3 of 3) 9439 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak1_68_626_-0.409726312555245_9.08745847652442_5.00675173448135 chr11 87736225 87737357 + 5.00675173448135 NA promoter-TSS (NM_009296) promoter-TSS (NM_009296) -774 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding common_peak1_15_31_1.29625326312517_5.64812663156258_5.00588687210447 chr10 42026022 42026475 + 5.00588687210447 NA Intergenic Intergenic -7866 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding unique_peak1_15_31_1.29625326312517_5.64812663156258_5.00588687210447-3 chr3 153260496 153260954 + 5.00588687210447 NA intron (NM_011372, intron 3 of 4) intron (NM_011372, intron 3 of 4) 37924 NR_126464 75489 Mm.443252 NR_126464 ENSMUSG00000105023 1700012D16Rik - RIKEN cDNA 1700012D16 gene ncRNA unique_peak1_15_31_1.29625326312517_5.64812663156258_5.00588687210447 chr1 80155577 80156009 + 5.00588687210447 NA Intergenic (TC)n|Simple_repeat|Simple_repeat 58151 NM_173425 241128 Mm.145511 NM_173425 ENSMUSG00000043230 Fam124b A830043J08Rik family with sequence similarity 124, member B protein-coding unique_peak1_15_31_1.29625326312517_5.64812663156258_5.00588687210447-2 chr2 150656528 150657010 + 5.00588687210447 NA intron (NM_080575, intron 2 of 13) intron (NM_080575, intron 2 of 13) -10725 NR_040331 109344 Mm.440012 NR_040331 ENSMUSG00000087406 E130215H24Rik - RIKEN cDNA E130215H24 gene ncRNA unique_peak1_15_31_1.29625326312517_5.64812663156258_5.00588687210447-4 chr4 5797975 5798377 + 5.00588687210447 NA intron (NM_173426, intron 2 of 2) intron (NM_173426, intron 2 of 2) 153997 NM_173426 242297 Mm.331470 NM_173426 ENSMUSG00000049119 Fam110b 1700012H17Rik|5031405P22|AW049855 family with sequence similarity 110, member B protein-coding unique_peak1_15_31_1.29625326312517_5.64812663156258_5.00588687210447-5 chr8 119826872 119827267 + 5.00588687210447 NA intron (NM_028071, intron 2 of 3) intron (NM_028071, intron 2 of 3) 13510 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak2_164_1630_-0.246115532172682_10.5484833006255_5.00552072504839 chr10 7662145 7664357 + 5.00552072504839 NA promoter-TSS (NR_030698) promoter-TSS (NR_030698) -120 NR_030698 320642 Mm.398806 NR_030698 A630066F11Rik - RIKEN cDNA A630066F11 gene ncRNA common_peak1_21_198_-0.776826877849698_7.2482111816188_5.00537356127028 chr9 20385225 20385679 + 5.00537356127028 NA promoter-TSS (NM_001004190) promoter-TSS (NM_001004190) -294 NM_001004190 434377 Mm.379669 NM_001004190 ENSMUSG00000045519 Zfp560 2310030G09Rik|Znf560 zinc finger protein 560 protein-coding common_peak1_33_116_0.759783852577122_7.25025664587197_5.00537356127028 chr7 133776201 133776945 + 5.00537356127028 NA promoter-TSS (NM_025850) promoter-TSS (NM_025850) 230 NM_001286032 101437 Mm.199223 NM_133941 ENSMUSG00000030986 Dhx32 3110079L04Rik|4732469F02Rik|AA408140|Ddx32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 protein-coding common_peak1_214_2201_-0.210765996432098_10.9992157553483_5.0038869369316 chr19 47730261 47732299 + 5.0038869369316 NA promoter-TSS (NM_026377) promoter-TSS (NM_026377) -476 NM_026377 67788 Mm.181610 NM_026377 ENSMUSG00000025066 Sfr1 6330577E15Rik|Meir5 SWI5 dependent recombination repair 1 protein-coding common_peak2_118_732_0.329402982105833_9.68237087918673_5.00381662066284 chr8 123224065 123225674 + 5.00381662066284 NA promoter-TSS (NM_194446) promoter-TSS (NM_194446) 28 NM_194444 234854 Mm.190984 NM_194444 ENSMUSG00000033862 Cdk10 BC017131 cyclin-dependent kinase 10 protein-coding common_peak1_254_2038_0.202130303989181_11.0947112120112_5.00368403742556 chr15 78519175 78522940 + 5.00368403742556 NA Intergenic Intergenic 8594 NM_001204153 72709 Mm.34776 NM_028331 ENSMUSG00000022440 C1qtnf6 2810036M19Rik|CTRP6 C1q and tumor necrosis factor related protein 6 protein-coding common_peak1_72_665_-0.397059340685633_9.18084869672844_5.00358643595105 chr14 61172905 61173777 + 5.00358643595105 NA exon (NM_172809, exon 3 of 10) exon (NM_172809, exon 3 of 10) 34884 NM_172809 50720 Mm.440703 NM_015788 ENSMUSG00000048279 Sacs A230052M14|DNAJC29|E130115J16Rik|mKIAA0730 sacsin protein-coding common_peak1_71_361_0.458064097162174_8.72887793566429_5.0018983895792 chr15 82146263 82147183 + 5.0018983895792 NA promoter-TSS (NM_033218) promoter-TSS (NM_033218) -546 NM_033218 20788 Mm.9002 NM_033218 ENSMUSG00000022463 Srebf2 AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc sterol regulatory element binding factor 2 protein-coding common_peak1_418_4756_-0.14124987964577_12.1452113701396_5.00186716984134 chr2 164910380 164912840 + 5.00186716984134 NA 5' UTR (NM_199027, exon 1 of 28) 5' UTR (NM_199027, exon 1 of 28) 140 NM_199027 329559 Mm.330776 NM_199027 ENSMUSG00000039834 Zfp335 1810045J01Rik|NIF-1|Nif1|Znf335 zinc finger protein 335 protein-coding unique_peak2_11_115_-1.07081783822183_6.32257207601666_5.00001218708292 chr15 67410208 67410958 + 5.00001218708292 NA Intergenic Intergenic 183814 NR_045140 69334 Mm.63770 NR_045140 ENSMUSG00000102069 1700012I11Rik - RIKEN cDNA 1700012I11 gene ncRNA unique_peak2_11_115_-1.07081783822183_6.32257207601666_5.00001218708292-2 chr19 33589537 33590365 + 5.00001218708292 NA 5' UTR (NM_001013770, exon 1 of 11) 5' UTR (NM_001013770, exon 1 of 11) 360 NM_001013770 381236 Mm.491242 NM_001013770 ENSMUSG00000024766 Lipo3 AI747699|Lipo1 lipase, member O3 protein-coding common_peak1_11_115_-1.07081783822183_6.32257207601666_5.00001218708292 chr9 110333374 110333694 + 5.00001218708292 NA intron (NM_001001144, intron 1 of 22) CpG 178 NM_001001144 235623 Mm.288741 NM_001001144 ENSMUSG00000032485 Scap 9530044G19|mKIAA0199 SREBF chaperone protein-coding common_peak1_38_144_0.693034359592926_7.5264262698114_4.99917751386702 chr1 135429946 135430509 + 4.99917751386702 NA intron (NM_153774, intron 1 of 23) CpG 264 NM_153774 226432 Mm.271642 NM_153774 ENSMUSG00000041879 Ipo9 0710008K06Rik|AI845704|C78347|Imp9|Ranbp9|mKIAA1192 importin 9 protein-coding common_peak1_148_1453_-0.260886551811973_10.3753682780136_4.9989406844946 chr9 74974902 74976739 + 4.9989406844946 NA promoter-TSS (NM_153584) promoter-TSS (NM_153584) -291 NM_153584 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding common_peak2_154_1050_0.277240837650449_10.1761673727874_4.99660369202598 chr12 112587994 112590168 + 4.99660369202598 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 297 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak2_77_714_-0.382243670871535_9.29067759622999_4.99522307917821 chr11 87964424 87966459 + 4.99522307917821 NA Intergenic Intergenic 21144 NM_001168472 68097 Mm.246436 NM_026556 ENSMUSG00000020483 Dynll2 1700064A15Rik|6720463E02Rik|C87222|DLC8|DLC8b|Dlc2 dynein light chain LC8-type 2 protein-coding common_peak1_225_1738_0.218089592052172_10.8730870133327_4.99518146337453 chr19 60946067 60948606 + 4.99518146337453 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 57587 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak1_69_635_-0.404824929574465_9.11047049049712_4.99510752832903 chr10 80172861 80173961 + 4.99510752832903 NA intron (NM_027207, intron 1 of 2) B1_Mus1|SINE|Alu 467 NM_027207 69770 Mm.302754 NM_027207 ENSMUSG00000035595 1600002K03Rik - RIKEN cDNA 1600002K03 gene protein-coding common_peak1_283_3028_-0.178241694575645_11.4755050155076_4.99334565048105 chr1 16103750 16106405 + 4.99334565048105 NA promoter-TSS (NM_011291) promoter-TSS (NM_011291) -644 NM_011291 19989 Mm.319659 NM_011291 ENSMUSG00000043716 Rpl7 Rpl7a|Surf-3 ribosomal protein L7 protein-coding common_peak2_308_3338_-0.169517978133094_11.6204413889966_4.9916715978779 chr11 116076010 116079592 + 4.9916715978779 NA TTS (NM_016852) TTS (NM_016852) 160 NM_001009573 70450 Mm.259460 NM_001009573 ENSMUSG00000057948 Unc13d 2610108D09Rik|Jinx|Munc13-4|mFLJ00067 unc-13 homolog D (C. elegans) protein-coding common_peak1_219_1677_0.221988640318804_10.8235213205992_4.99041596138273 chr16 52080462 52083091 + 4.99041596138273 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 50227 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_20_190_-0.799954184237251_7.17745173591712_4.99003182740191 chrX 106012236 106012607 + 4.99003182740191 NA promoter-TSS (NM_025952) promoter-TSS (NM_025952) -522 NM_025952 67075 Mm.275943 NM_025952 ENSMUSG00000031232 Magt1 2410001C15Rik|2610529C04Rik|2810482I07Rik|IAG2|IAP magnesium transporter 1 protein-coding unique_peak2_20_190_-0.799954184237251_7.17745173591712_4.99003182740191 chr5 52910056 52910781 + 4.99003182740191 NA Intergenic Intergenic 76283 NM_024213 52206 Mm.272568 NM_024213 ENSMUSG00000029176 Anapc4 2610306D21Rik|APC4|D5Ertd249e anaphase promoting complex subunit 4 protein-coding common_peak2_81_435_0.419871251474856_8.97811995051435_4.98992177661587 chr16 92644065 92645699 + 4.98992177661587 NA intron (NM_001111023, intron 3 of 5) intron (NM_001111023, intron 3 of 5) 52447 NM_001111023 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_37_337_-0.573902921698937_8.11392797543271_4.98967908002427 chr9 50738819 50740296 + 4.98967908002427 NA TTS (NM_025865) TTS (NM_025865) -1822 NM_001311069 330938 Mm.82598 NM_178118 ENSMUSG00000032064 Dixdc1 4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735 DIX domain containing 1 protein-coding common_peak2_104_616_0.356453551527402_9.44735345491312_4.9889638305259 chr9 69397536 69398734 + 4.9889638305259 NA intron (NM_145618, intron 1 of 15) CpG 137 NM_145618 93697 Mm.35911 NM_145618 ENSMUSG00000032235 Ice2 B230343B06Rik|Narg2 interactor of little elongation complex ELL subunit 2 protein-coding common_peak2_50_218_0.572883717526283_8.06122891836431_4.98799942901201 chr1 152019253 152020360 + 4.98799942901201 NA intron (NM_197990, intron 1 of 5) RCHARR1|DNA|hAT-Charlie 70514 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak1_50_218_0.572883717526283_8.06122891836431_4.98799942901201 chr11 17051396 17052378 + 4.98799942901201 NA promoter-TSS (NM_029861) promoter-TSS (NM_029861) -47 NM_029861 380686 Mm.425666 NM_029861 ENSMUSG00000044629 Cnrip1 1500041B16Rik|3110054C06Rik|5330437A18Rik|AI854501|C2orf32 cannabinoid receptor interacting protein 1 protein-coding common_peak2_150_1013_0.28267844798221_10.1271811609944_4.98793902493097 chr3 105958255 105960240 + 4.98793902493097 NA promoter-TSS (NM_027432) promoter-TSS (NM_027432) -251 NM_027432 70465 Mm.5110 NM_027432 ENSMUSG00000000561 Wdr77 2610003I18Rik|2610312E17Rik|C79984|p44/MEP50 WD repeat domain 77 protein-coding common_peak2_173_1227_0.25731529648203_10.3907524936112_4.98711250381199 chr12 110601124 110602780 + 4.98711250381199 NA intron (NM_030238, intron 1 of 76) CpG 557 NM_030238 13424 Mm.181430 NM_030238 ENSMUSG00000018707 Dync1h1 9930018I23Rik|AI894280|DHC1|DHC1a|DNCL|Dnchc1|Dnec1|Dnecl|Loa|MAP1C|P22|Swl|mKIAA0325 dynein cytoplasmic 1 heavy chain 1 protein-coding common_peak2_98_924_-0.33185509158951_9.68738200960892_4.98673402205668 chr9 116383278 116384906 + 4.98673402205668 NA Intergenic Intergenic -208729 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_163_1133_0.267462962495911_10.2809364061902_4.98661594159984 chr15 75908482 75909628 + 4.98661594159984 NA promoter-TSS (NM_178646) promoter-TSS (NM_178646) 289 NM_001285433 66656 Mm.258927 NM_023240 ENSMUSG00000055762 Eef1d EF-1-delta eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) protein-coding common_peak2_105_624_0.354641697080019_9.46503322808946_4.98620163928426-2 chr2 164832532 164834661 + 4.98620163928426 NA promoter-TSS (NM_001082974) promoter-TSS (NM_001082974) 0 NM_001082974 415115 Mm.474586 NM_001082974 ENSMUSG00000039873 Neurl2 Neur2|Ozz|Ozz-E3 neuralized E3 ubiquitin protein ligase 2 protein-coding common_peak2_105_624_0.354641697080019_9.46503322808946_4.98620163928426 chr11 104607241 104610117 + 4.98620163928426 NA intron (NM_016780, intron 1 of 14) intron (NM_016780, intron 1 of 14) 679 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_335_2924_0.169702979185793_11.599072398951_4.98481139241202 chr2 164878572 164880736 + 4.98481139241202 NA intron (NM_146129, intron 1 of 16) CpG 286 NM_146129 228866 Mm.241134 NM_146129 ENSMUSG00000039849 Pcif1 2310022K11Rik|C20orf67|F730014I05Rik PDX1 C-terminal inhibiting factor 1 protein-coding common_peak1_25_75_0.907493731197347_6.70167437904226_4.98470155648934-2 chr13 32963480 32964090 + 4.98470155648934 NA Intergenic MER31A|LTR|ERV1 -1728 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak1_25_75_0.907493731197347_6.70167437904226_4.98470155648934 chr11 106545804 106546346 + 4.98470155648934 NA intron (NM_198292, intron 4 of 11) intron (NM_198292, intron 4 of 11) 45084 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA common_peak1_25_75_0.907493731197347_6.70167437904226_4.98470155648934-3 chr14 75190297 75190930 + 4.98470155648934 NA intron (NM_008879, intron 2 of 16) intron (NM_008879, intron 2 of 16) -51674 NM_019775 56373 Mm.24242 NM_019775 ENSMUSG00000021999 Cpb2 1110032P04Rik|4930405E17Rik|AI255929|CPR|Cpu|TAFI carboxypeptidase B2 (plasma) protein-coding common_peak1_66_606_-0.415009006105958_9.0380482032027_4.98342879958135 chr17 74315963 74317003 + 4.98342879958135 NA promoter-TSS (NM_001146224) promoter-TSS (NM_001146224) -50 NM_001146223 66310 Mm.28536 NM_024428 ENSMUSG00000024067 Dpy30 2810410M20Rik|C87842 dpy-30, histone methyltransferase complex regulatory subunit protein-coding common_peak1_48_205_0.590375709727466_7.98168838204695_4.98242141145509 chrX 134276327 134277255 + 4.98242141145509 NA intron (NM_001167994, intron 1 of 13) C-rich|Low_complexity|Low_complexity 193 NM_172540 215201 Mm.289368 NM_172540 ENSMUSG00000067369 Trmt2b 4732479N06Rik TRM2 tRNA methyltransferase 2B protein-coding common_peak2_501_4913_0.13172764963819_12.3285459671813_4.98093418639053 chr7 34386486 34390892 + 4.98093418639053 NA intron (NM_025948, intron 1 of 10) intron (NM_025948, intron 1 of 10) 851 NM_025948 67070 Mm.276503 NM_025948 ENSMUSG00000066568 Lsm14a 2700023B17Rik|AA407828|AU017544|Tral LSM14A mRNA processing body assembly factor protein-coding unique_peak2_27_249_-0.679219534644162_7.62617451734001_4.97996860776999 chr2 11547608 11549226 + 4.97996860776999 NA intron (NM_001177758, intron 1 of 14) intron (NM_001177758, intron 1 of 14) 5512 NM_001177758 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding common_peak1_27_249_-0.679219534644162_7.62617451734001_4.97996860776999 chrX 134307521 134308029 + 4.97996860776999 NA promoter-TSS (NM_001305631) promoter-TSS (NM_001305631) -309 NM_145924 102920 Mm.34903 NM_145924 ENSMUSG00000031262 Cenpi CENP-I|Fshprh1 centromere protein I protein-coding common_peak2_40_156_0.666822516173799_7.62803200697853_4.97996860776999-2 chr6 147042390 147043446 + 4.97996860776999 NA intron (NM_145573, intron 1 of 7) CpG 148 NM_145573 232536 Mm.46656 NM_145573 ENSMUSG00000040112 Mrps35 MDSO23|MRP-S28|MRPS28 mitochondrial ribosomal protein S35 protein-coding common_peak2_40_156_0.666822516173799_7.62803200697853_4.97996860776999 chr1 127291418 127292659 + 4.97996860776999 NA intron (NM_145128, intron 2 of 17) intron (NM_145128, intron 2 of 17) 87052 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_397_3643_0.152286861231724_11.9074506744179_4.97892184878648 chr5 93265010 93268452 + 4.97892184878648 NA promoter-TSS (NM_007635) promoter-TSS (NM_007635) -842 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding common_peak1_116_1110_-0.300565135627947_9.96736053357512_4.97869610322957 chr8 94354259 94355445 + 4.97869610322957 NA intron (NM_001205311, intron 21 of 24) intron (NM_001205311, intron 21 of 24) 25644 NM_001205311 20497 Mm.25804 NM_019415 ENSMUSG00000031766 Slc12a3 AI035291|NCC|NCCT|TSC solute carrier family 12, member 3 protein-coding common_peak2_84_783_-0.363067996262716_9.43317584598385_4.97856782494591 chr2 173737202 173738409 + 4.97856782494591 NA intron (NM_019806, intron 1 of 5) CpG 234 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding common_peak1_47_427_-0.501079207122695_8.4909273828398_4.97832809964719 chr11 5436325 5437367 + 4.97832809964719 NA intron (NM_001080924, intron 1 of 8) B4|SINE|B4 8001 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding common_peak1_47_427_-0.501079207122695_8.4909273828398_4.97832809964719-2 chr17 32946673 32947429 + 4.97832809964719 NA intron (NM_130882, intron 1 of 12) intron (NM_130882, intron 1 of 12) 310 NM_130882 170716 Mm.254838 NM_130882 ENSMUSG00000024055 Cyp4f13 0610030I10Rik|Cypf13 cytochrome P450, family 4, subfamily f, polypeptide 13 protein-coding common_peak2_53_237_0.554002114718007_8.17181882066695_4.97803648130429 chr10 19175531 19177186 + 4.97803648130429 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 9120 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_323_3526_-0.164659155060662_11.7018962828959_4.9777927587289 chr6 8644934 8651147 + 4.9777927587289 NA intron (NM_001252266, intron 10 of 11) intron (NM_001252266, intron 10 of 11) 110418 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak1_31_284_-0.631952534740581_7.83884184168181_4.97689673483063 chr10 60080610 60081272 + 4.97689673483063 NA intron (NM_026937, intron 9 of 10) intron (NM_026937, intron 9 of 10) -25316 NM_052994 94214 Mm.153429 NM_052994 ENSMUSG00000058297 Spock2 AA407235|Gcap26|mKIAA0275 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 protein-coding common_peak1_31_284_-0.631952534740581_7.83884184168181_4.97689673483063-2 chr13 52721745 52722347 + 4.97689673483063 NA Intergenic Intergenic 35159 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak1_136_1323_-0.274349850272358_10.233512481671_4.97636887225163 chr19 7216585 7217733 + 4.97636887225163 NA intron (NM_007750, intron 1 of 1) intron (NM_007750, intron 1 of 1) 457 NM_007750 12868 Mm.14022 NM_007750 ENSMUSG00000035885 Cox8a COX8L cytochrome c oxidase subunit VIIIa protein-coding common_peak1_79_733_-0.375277402839725_9.33199755142335_4.97602058382039 chrX 36795625 36796395 + 4.97602058382039 NA intron (NM_007451, intron 1 of 3) CpG 413 NM_007451 11740 Mm.371544 NM_007451 ENSMUSG00000016319 Slc25a5 Ant2 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 protein-coding common_peak1_70_645_-0.402230808846907_9.13427495027047_4.97588926230618 chr13 30613327 30614343 + 4.97588926230618 NA Intergenic Intergenic -1208 NR_045975 75090 Mm.292232 NR_045975 ENSMUSG00000086263 4930519D14Rik - RIKEN cDNA 4930519D14 gene ncRNA common_peak1_24_70_0.936268072631702_6.61788115582053_4.97471604574603-2 chr3 69171476 69171979 + 4.97471604574603 NA Intergenic B4A|SINE|B4 40494 NR_126533 381452 Mm.331067 NM_001243000 ENSMUSG00000094763 Gm1647 - predicted gene 1647 ncRNA common_peak1_24_70_0.936268072631702_6.61788115582053_4.97471604574603 chr1 136141263 136141767 + 4.97471604574603 NA intron (NM_001039472, intron 1 of 34) intron (NM_001039472, intron 1 of 34) 10114 NM_001039472 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding common_peak2_108_649_0.34744632761382_9.51801907172273_4.97370456825007 chr18 53176246 53177415 + 4.97370456825007 NA intron (NM_026386, intron 1 of 14) CpG 465 NM_026386 67804 Mm.252171 NM_026386 ENSMUSG00000034484 Snx2 0610030A03Rik sorting nexin 2 protein-coding common_peak1_39_355_-0.557986892149266_8.19673998489177_4.97364562465011 chr13 24618048 24618987 + 4.97364562465011 NA intron (NM_178658, intron 1 of 13) intron (NM_178658, intron 1 of 13) 3911 NM_178658 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak2_39_355_-0.557986892149266_8.19673998489177_4.97364562465011-2 chr16 90809399 90811094 + 4.97364562465011 NA exon (NM_029497, exon 1 of 39) exon (NM_029497, exon 1 of 39) 167 NM_029497 207932 Mm.328688 NM_029497 ENSMUSG00000039929 Urb1 4921511H13Rik|5730405K23Rik|AA670781|AI645590|mKIAA0539 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) protein-coding common_peak2_39_355_-0.557986892149266_8.19673998489177_4.97364562465011 chr11 119351425 119353163 + 4.97364562465011 NA intron (NM_018822, intron 2 of 7) intron (NM_018822, intron 2 of 7) 3216 NM_018822 27029 Mm.103788 NM_018822 ENSMUSG00000005043 Sgsh 4632406A19Rik N-sulfoglucosamine sulfohydrolase (sulfamidase) protein-coding common_peak1_170_1199_0.259814545207577_10.3587259630997_4.97358490000175 chr18 38993081 38994258 + 4.97358490000175 NA intron (NM_175164, intron 1 of 22) CpG 524 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_23_65_0.969381348733641_6.52908479372527_4.9727543584012 chr1 127291453 127291961 + 4.9727543584012 NA intron (NM_145128, intron 2 of 17) intron (NM_145128, intron 2 of 17) 86721 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_23_65_0.969381348733641_6.52908479372527_4.9727543584012-4 chr11 62752385 62752771 + 4.9727543584012 NA Intergenic Intergenic -23485 NM_133208 170740 Mm.339982 NM_133208 ENSMUSG00000005267 Zfp287 B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74 zinc finger protein 287 protein-coding common_peak1_23_65_0.969381348733641_6.52908479372527_4.9727543584012-2 chr10 68508698 68509173 + 4.9727543584012 NA intron (NM_028491, intron 5 of 7) intron (NM_028491, intron 5 of 7) 32940 NM_028491 73287 Mm.141830 NM_028491 ENSMUSG00000019945 1700040L02Rik - RIKEN cDNA 1700040L02 gene protein-coding common_peak1_23_65_0.969381348733641_6.52908479372527_4.9727543584012-5 chr12 112647691 112648326 + 4.9727543584012 NA intron (NM_001161737, intron 2 of 2) intron (NM_001161737, intron 2 of 2) 3180 NM_013929 30954 Mm.289812 NM_013929 ENSMUSG00000064326 Siva1 CD27bp|Siva SIVA1, apoptosis-inducing factor protein-coding common_peak1_23_65_0.969381348733641_6.52908479372527_4.9727543584012-6 chr18 39008113 39008668 + 4.9727543584012 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 15245 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_23_65_0.969381348733641_6.52908479372527_4.9727543584012-3 chr11 46466396 46466807 + 4.9727543584012 NA intron (NM_134250, intron 3 of 6) RMER10A|LTR|ERVL 11670 NM_134250 171285 Mm.72168 NM_134250 ENSMUSG00000020399 Havcr2 TIM-3|Tim3|Timd3 hepatitis A virus cellular receptor 2 protein-coding common_peak2_123_1184_-0.290764516678603_10.0652890854463_4.97097003853118 chr11 46325132 46327840 + 4.97097003853118 NA 3' UTR (NM_010583, exon 17 of 17) 3' UTR (NM_010583, exon 17 of 17) -13627 NM_001252459 76884 Mm.154358 NM_133769 ENSMUSG00000020340 Cyfip2 1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168 cytoplasmic FMR1 interacting protein 2 protein-coding common_peak1_178_1275_0.252131971657899_10.4434785995938_4.97044197253746 chr2 180588990 180590228 + 4.97044197253746 NA exon (NM_031373, exon 1 of 7) exon (NM_031373, exon 1 of 7) 202 NM_031373 72075 Mm.250418 NM_031373 ENSMUSG00000049401 Ogfr 2010013E17Rik opioid growth factor receptor protein-coding common_peak1_341_3753_-0.158967387941061_11.7947292408603_4.96925444253921 chr11 83629013 83632316 + 4.96925444253921 NA Intergenic Intergenic 18714 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak1_45_409_-0.51440698422558_8.42227660739266_4.96881354650228 chr8 83607311 83608045 + 4.96881354650228 NA promoter-TSS (NM_001308227) promoter-TSS (NM_001308227) -497 NM_018808 81489 Mm.282092 NM_018808 ENSMUSG00000005483 Dnajb1 0610007I11Rik|DjB1|HSPF1|Hdj1|Hsp40 DnaJ heat shock protein family (Hsp40) member B1 protein-coding common_peak1_158_1087_0.272413440346059_10.2236695614234_4.96829761378485 chr11 115186303 115187968 + 4.96829761378485 NA promoter-TSS (NM_001033393) promoter-TSS (NM_001033393) 181 NM_025400 66176 Mm.86823 NM_025400 ENSMUSG00000015542 Nat9 1110028N05Rik N-acetyltransferase 9 (GCN5-related, putative) protein-coding common_peak1_102_965_-0.324331495059035_9.75371363130626_4.96726105733704 chr17 65783535 65784243 + 4.96726105733704 NA intron (NM_001114131, intron 2 of 19) CpG-6545 534 NR_104465 70351 Mm.48686 NM_146081 ENSMUSG00000061950 Ppp4r1 3110001J10Rik|Pp4r1 protein phosphatase 4, regulatory subunit 1 protein-coding common_peak1_207_2118_-0.21390969417217_10.9422130252861_4.96641846036439 chr18 82691831 82693557 + 4.96641846036439 NA promoter-TSS (NM_177832) promoter-TSS (NM_177832) 40 NM_177832 329002 Mm.34438 NM_177832 ENSMUSG00000041258 Zfp236 AI447957|Gm335 zinc finger protein 236 protein-coding common_peak1_150_1474_-0.257978854151014_10.3975098120611_4.96628404278804 chr5 32459023 32460158 + 4.96628404278804 NA intron (NM_172707, intron 1 of 7) CpG 620 NM_172707 19046 Mm.241931 NM_172707 ENSMUSG00000014956 Ppp1cb 1200010B19 protein phosphatase 1, catalytic subunit, beta isoform protein-coding common_peak2_444_4208_0.141862161301452_12.1101928749918_4.96613714804243 chr11 68851786 68855220 + 4.96613714804243 NA promoter-TSS (NM_023668) promoter-TSS (NM_023668) -372 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding common_peak1_16_35_1.23361125953186_5.78673063120824_4.9658701876013 chr1 87628805 87629139 + 4.9658701876013 NA intron (NR_122078, intron 1 of 27) intron (NR_122078, intron 1 of 27) 8660 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding unique_peak1_16_35_1.23361125953186_5.78673063120824_4.9658701876013 chr12 76594090 76594509 + 4.9658701876013 NA intron (NM_013675, intron 32 of 35) intron (NM_013675, intron 32 of 35) -46374 NR_046044 100504549 Mm.440349 NR_046044 AI463170 - expressed sequence AI463170 ncRNA common_peak1_56_257_0.533271464126919_8.27786298748671_4.96558806899893 chr14 24486422 24487274 + 4.96558806899893 NA intron (NM_001081247, intron 1 of 30) intron (NM_001081247, intron 1 of 30) 198 NM_001081247 218832 Mm.343610 NM_183157 ENSMUSG00000025280 Polr3a 9330175N20Rik|BC053071|RPC1|RPC155 polymerase (RNA) III (DNA directed) polypeptide A protein-coding common_peak1_110_666_0.342375216180111_9.55273055927464_4.96523895627447 chr1 78488500 78489745 + 4.96523895627447 NA promoter-TSS (NM_001278075) promoter-TSS (NM_001278075) -225 NR_102757 23874 Mm.17898 NM_011811 ENSMUSG00000026245 Farsb C76708|Farsa|Farsl|Farslb|Frsb phenylalanyl-tRNA synthetase, beta subunit protein-coding common_peak1_46_193_0.60321824523889_7.90152196480657_4.96485009442235 chr10 59702555 59703210 + 4.96485009442235 NA intron (NM_001291443, intron 1 of 12) intron (NM_001291443, intron 1 of 12) 319 NM_001291443 216001 Mm.27199 NM_144822 ENSMUSG00000020111 Micu1 C730016L05Rik|Calc|Cbara1 mitochondrial calcium uptake 1 protein-coding common_peak1_103_975_-0.322091470549243_9.76969160228827_4.9646178287926 chr10 42477587 42478679 + 4.9646178287926 NA intron (NM_145743, intron 1 of 12) intron (NM_145743, intron 1 of 12) 432 NM_145743 215951 Mm.89646 NM_145743 ENSMUSG00000038302 Lace1 CG8520 lactation elevated 1 protein-coding common_peak1_43_391_-0.5282997902349_8.35055994899776_4.9643018276051 chr6 129045125 129045945 + 4.9643018276051 NA promoter-TSS (NM_153094) promoter-TSS (NM_153094) -366 NR_024262 232408 Mm.259262 NM_153094 ENSMUSG00000030154 Klrb1f A630024B12Rik|Nkr-p1f|Nkrp1-f|Nkrp1f killer cell lectin-like receptor subfamily B member 1F protein-coding common_peak1_67_616_-0.412365795802534_9.06294378124815_4.96183105760862 chr17 17600376 17601374 + 4.96183105760862 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 23614 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak2_67_616_-0.412365795802534_9.06294378124815_4.96183105760862 chr10 4432474 4433478 + 4.96183105760862 NA promoter-TSS (NM_025343) promoter-TSS (NM_025343) 371 NM_024261 73419 Mm.346733 NM_024261 ENSMUSG00000061759 Armt1 1700052N19Rik|AW320013|AW536799 acidic residue methyltransferase 1 protein-coding common_peak1_62_298_0.497607485753678_8.47280541707494_4.96153044376762 chr15 97784296 97785108 + 4.96153044376762 NA intron (NM_026353, intron 1 of 2) CpG 337 NM_026353 67739 Mm.28955 NM_026353 ENSMUSG00000081534 Slc48a1 4930570C03Rik solute carrier family 48 (heme transporter), member 1 protein-coding common_peak1_62_298_0.497607485753678_8.47280541707494_4.96153044376762-2 chr8 124282991 124284164 + 4.96153044376762 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 52183 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_62_298_0.497607485753678_8.47280541707494_4.96153044376762 chr17 26594838 26596503 + 4.96153044376762 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 34158 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_78_413_0.428612133613992_8.90779302430632_4.9602585973288 chr12 112644816 112645656 + 4.9602585973288 NA intron (NM_001161737, intron 1 of 2) CpG 408 NM_013929 30954 Mm.289812 NM_013929 ENSMUSG00000064326 Siva1 CD27bp|Siva SIVA1, apoptosis-inducing factor protein-coding common_peak1_438_4135_0.143081023696269_12.0855609821631_4.95990712083696 chr4 59191808 59197722 + 4.95990712083696 NA intron (NM_011673, intron 1 of 8) intron (NM_011673, intron 1 of 8) 5215 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak1_94_883_-0.33943276911622_9.61818617483332_4.95868020756407 chr17 15497568 15498854 + 4.95868020756407 NA promoter-TSS (NM_011185) promoter-TSS (NM_011185) 65 NM_011185 19170 Mm.32912 NM_011185 ENSMUSG00000014769 Psmb1 AA409053|C81484|Lmpc5 proteasome (prosome, macropain) subunit, beta type 1 protein-coding common_peak1_32_111_0.769965025603276_7.19233743485924_4.95821570276178 chr15 85859129 85859712 + 4.95821570276178 NA promoter-TSS (NM_001168672) promoter-TSS (NM_001168672) -287 NM_001168672 29870 Mm.20858 NM_013882 ENSMUSG00000022385 Gtse1 B99|Gtse-1 G two S phase expressed protein 1 protein-coding common_peak1_32_111_0.769965025603276_7.19233743485924_4.95821570276178-2 chr17 31829871 31830647 + 4.95821570276178 NA Intergenic Intergenic 25533 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak1_160_1584_-0.248270211667791_10.5061320191929_4.95776568050332 chr12 59130301 59132114 + 4.95776568050332 NA promoter-TSS (NM_001165253) promoter-TSS (NM_001165253) -246 NM_001165253 338320 Mm.213215 NM_146034 ENSMUSG00000021000 Mia2 Ctage5|D12Bwg0579e|Mea6|Mgea|Mgea6 melanoma inhibitory activity 2 protein-coding common_peak1_234_1831_0.212032886207393_10.9452202312006_4.95695961163834 chr1 13588955 13590471 + 4.95695961163834 NA exon (NM_028173, exon 1 of 11) exon (NM_028173, exon 1 of 11) 197 NM_028173 72265 Mm.28765 NM_028173 ENSMUSG00000025935 Tram1 1810049E02Rik|TRAMP translocating chain-associating membrane protein 1 protein-coding common_peak1_14_140_-0.957507230987446_6.66079773690507_4.95605732338743-2 chr7 30090277 30090648 + 4.95605732338743 NA promoter-TSS (NM_152814) promoter-TSS (NM_152814) 48 NM_152814 72556 Mm.441512 NM_152814 ENSMUSG00000078768 Zfp566 2700043M03Rik|mszf4 zinc finger protein 566 protein-coding common_peak1_14_140_-0.957507230987446_6.66079773690507_4.95605732338743 chr10 82982593 82983052 + 4.95605732338743 NA Intergenic URR1B|DNA|hAT-Charlie -2675 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_260_2103_0.198013357526834_11.1379256680557_4.95441135123593 chr2 155978419 155980566 + 4.95441135123593 NA intron (NM_001129999, intron 19 of 32) intron (NM_001129999, intron 19 of 32) 22934 NM_177217 16328 Mm.288729 NM_008383 ENSMUSG00000038241 Cep250 AW490617|B230210E21Rik|Cep2|Inmp centrosomal protein 250 protein-coding common_peak2_36_328_-0.582160122523831_8.07086371247333_4.95333208840729 chr5 106802182 106804044 + 4.95333208840729 NA Intergenic ID_B1|SINE|B4 -106283 NM_026856 52397 Mm.249474 NM_026856 ENSMUSG00000049606 Zfp644 1110068L01Rik|AA408882|BM-005|D5Ertd689e|Zep-2 zinc finger protein 644 protein-coding common_peak2_238_1872_0.209969329849534_10.9761198491678_4.95332248058169 chr17 20944247 20946553 + 4.95332248058169 NA promoter-TSS (NM_016891) promoter-TSS (NM_016891) -54 NM_016891 51792 Mm.294138 NM_016891 ENSMUSG00000007564 Ppp2r1a 6330556D22Rik|PP2A|PR65 protein phosphatase 2, regulatory subunit A, alpha protein-coding common_peak1_64_587_-0.422757824503467_8.98829343258463_4.95310320958147 chr7 75656792 75657852 + 4.95310320958147 NA intron (NM_029332, intron 8 of 36) Lx7|LINE|L1 -191016 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_19_47_1.10617172690962_6.13804836417597_4.95267395452048 chr11 67477927 67478334 + 4.95267395452048 NA Intergenic Intergenic -54868 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding unique_peak1_19_47_1.10617172690962_6.13804836417597_4.95267395452048 chr1 144215489 144215982 + 4.95267395452048 NA Intergenic Intergenic 33369 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak2_145_1420_-0.263759501670794_10.3408110884074_4.95189170511707 chr13 14062014 14063633 + 4.95189170511707 NA promoter-TSS (NM_194262) promoter-TSS (NM_194262) 578 NM_010282 14593 Mm.148039 NM_010282 ENSMUSG00000021302 Ggps1 1810026C22Rik|9530089B04Rik|AI843169|C79210 geranylgeranyl diphosphate synthase 1 protein-coding common_peak1_30_275_-0.641842252043862_7.78760333075624_4.95177445040069 chr11 115627703 115628182 + 4.95177445040069 NA intron (NM_001252384, intron 1 of 7) CpG 353 NM_001252394 67283 Mm.383426 NM_026071 ENSMUSG00000020744 Slc25a19 2900089E13Rik|DNC|MUP1|TPC solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein-coding common_peak1_33_301_-0.608256167164551_7.9342766557428_4.95104841144902 chr1 52817981 52818630 + 4.95104841144902 NA promoter-TSS (NM_008384) promoter-TSS (NM_008384) -617 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding common_peak1_33_301_-0.608256167164551_7.9342766557428_4.95104841144902-2 chr4 129623610 129624319 + 4.95104841144902 NA promoter-TSS (NM_025455) promoter-TSS (NM_025455) -56 NM_025455 66264 Mm.383215 NM_025455 ENSMUSG00000028795 Ccdc28b 1110002E08Rik|1810010N17Rik coiled coil domain containing 28B protein-coding common_peak2_61_558_-0.433409956922528_8.90999949438193_4.9506005039361 chr19 6084153 6085898 + 4.9506005039361 NA promoter-TSS (NM_024231) promoter-TSS (NM_024231) -72 NM_026410 67849 Mm.23526 NM_026410 ENSMUSG00000024791 Cdca5 2610036L13Rik|AL024086|AW536684|C85404 cell division cycle associated 5 protein-coding common_peak2_68_625_-0.407423526685823_9.08630708358971_4.94989898492968 chr4 129499956 129501668 + 4.94989898492968 NA Intergenic CpG 9622 NM_001085491 68233 Mm.424983 NM_001085491 ENSMUSG00000078554 Fam229a 1700125D06Rik family with sequence similarity 229, member A protein-coding common_peak2_50_455_-0.485219237037285_8.5902803956461_4.94912225219606 chr9 44267449 44268878 + 4.94912225219606 NA promoter-TSS (NM_001163743) promoter-TSS (NM_001163743) 24 NM_001163743 270151 Mm.3957 NM_178420 ENSMUSG00000032109 Nlrx1 BC034204|NOD9 NLR family member X1 protein-coding common_peak1_96_903_-0.334840599051779_9.6527586628893_4.94857255915983 chr2 166504418 166506054 + 4.94857255915983 NA Intergenic (GA)n|Simple_repeat|Simple_repeat 57785 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak2_72_664_-0.394891504002924_9.17976477838709_4.94843290081423 chr9 56075250 56076843 + 4.94843290081423 NA Intergenic Intergenic -13930 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak1_84_459_0.406151796908116_9.04856594939843_4.94815051044696 chr17 50729732 50731066 + 4.94815051044696 NA Intergenic Intergenic 31718 NM_001297747 12228 Mm.392910 NM_009770 ENSMUSG00000022863 Btg3 ANA|tob5 B cell translocation gene 3 protein-coding common_peak1_188_1371_0.243678909932253_10.5439042211389_4.94742592931948 chr19 4112831 4114601 + 4.94742592931948 NA TTS (NM_001276284) TTS (NM_001276284) 7859 NM_001276284 11632 Mm.10433 NM_016666 ENSMUSG00000024847 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2 aryl-hydrocarbon receptor-interacting protein protein-coding unique_peak1_17_39_1.1827572669853_5.91330672838001_4.94658000734572-2 chr7 73534038 73534495 + 4.94658000734572 NA intron (NM_001081345, intron 2 of 38) B3|SINE|B2 7480 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding unique_peak1_17_39_1.1827572669853_5.91330672838001_4.94658000734572 chr5 65871387 65871737 + 4.94658000734572 NA intron (NM_001081105, intron 1 of 2) intron (NM_001081105, intron 1 of 2) 7993 NM_001081105 74734 Mm.20323 NM_001081105 ENSMUSG00000029204 Rhoh 5830400A04Rik|AU019774|Arhh ras homolog family member H protein-coding unique_peak2_8_91_-1.2454889053707_5.90081750337166_4.94658000734572 chr10 26202540 26203033 + 4.94658000734572 NA Intergenic Intergenic -26921 NM_001013766 268288 Mm.213322 NM_001013766 ENSMUSG00000051354 Samd3 Gm623 sterile alpha motif domain containing 3 protein-coding common_peak1_48_436_-0.494613232589915_8.52418285320564_4.94447587611127 chr2 155473139 155473898 + 4.94447587611127 NA Intergenic Intergenic -32735 NM_019825 56406 Mm.27592 NM_019825 ENSMUSG00000038369 Ncoa6 AIB3|ASC-2|ASC2|NRC|Ncoa7|PRIP|RAP250|mKIAA0181 nuclear receptor coactivator 6 protein-coding common_peak1_79_421_0.423259661296303_8.93272901935534_4.94346843045979 chr2 44922810 44924322 + 4.94346843045979 NA Intergenic Intergenic -61944 NM_172662 227835 Mm.314312 NM_172662 ENSMUSG00000036890 Gtdc1 E330008O22Rik glycosyltransferase-like domain containing 1 protein-coding common_peak1_139_1354_-0.269406799344988_10.2693737365687_4.94333815043411 chr13 14063763 14064932 + 4.94333815043411 NA promoter-TSS (NM_010282) promoter-TSS (NM_010282) 563 NM_198122 94246 Mm.439784 NM_194262 ENSMUSG00000039219 Arid4b BCAA|BRCAA1|RBBP1L1|Rbp1l1|SAP180 AT rich interactive domain 4B (RBP1-like) protein-coding common_peak1_264_2794_-0.184785215409118_11.356239960026_4.94330953652253 chr11 60726285 60728893 + 4.94330953652253 NA promoter-TSS (NM_022009) promoter-TSS (NM_022009) -326 NM_001302207 14248 Mm.339755 NM_022009 ENSMUSG00000002812 Flii 3632430F08Rik|Fliih flightless I actin binding protein protein-coding common_peak1_18_43_1.14093258475959_6.02989791101709_4.94330620741601-2 chr10 93226408 93226818 + 4.94330620741601 NA intron (NM_146239, intron 8 of 16) RSINE1|SINE|B4 63828 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak1_18_43_1.14093258475959_6.02989791101709_4.94330620741601-5 chr2 127923572 127923995 + 4.94330620741601 NA intron (NM_028765, intron 9 of 17) intron (NM_028765, intron 9 of 17) 69155 NM_028765 74121 Mm.244835 NM_028765 ENSMUSG00000027380 Acoxl 1200014P05Rik|AV025673 acyl-Coenzyme A oxidase-like protein-coding common_peak1_18_43_1.14093258475959_6.02989791101709_4.94330620741601-6 chr7 25213979 25214449 + 4.94330620741601 NA intron (NM_207677, intron 3 of 4) intron (NM_207677, intron 3 of 4) 3511 NR_106015 102466794 NR_106015 ENSMUSG00000098325 Mir7048 Gm27274|mmu-mir-7048 microRNA 7048 ncRNA common_peak1_18_43_1.14093258475959_6.02989791101709_4.94330620741601-3 chr11 68457123 68457497 + 4.94330620741601 NA intron (NM_177320, intron 1 of 18) intron (NM_177320, intron 1 of 18) 25185 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak1_18_43_1.14093258475959_6.02989791101709_4.94330620741601-4 chr19 7568425 7568878 + 4.94330620741601 NA intron (NM_139269, intron 2 of 4) intron (NM_139269, intron 2 of 4) 11192 NM_139269 225845 Mm.274810 NM_139269 ENSMUSG00000060675 Pla2g16 C78643|HRSL3|Hrasls3|Hrev107|MLP-3 phospholipase A2, group XVI protein-coding common_peak1_18_43_1.14093258475959_6.02989791101709_4.94330620741601 chr10 83002173 83002621 + 4.94330620741601 NA intron (NM_021439, intron 1 of 2) intron (NM_021439, intron 1 of 2) 16900 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_320_2757_0.173698193995076_11.5162558385115_4.94120611983274 chr5 21253441 21256029 + 4.94120611983274 NA intron (NM_175437, intron 18 of 30) intron (NM_175437, intron 18 of 30) 68468 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_28_90_0.840868674313872_6.92822897735563_4.94053240855365-2 chr5 140207145 140207770 + 4.94053240855365 NA intron (NM_010752, intron 10 of 17) intron (NM_010752, intron 10 of 17) 114095 NM_010752 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding common_peak2_28_90_0.840868674313872_6.92822897735563_4.94053240855365 chr11 31732460 31733193 + 4.94053240855365 NA Intergenic Intergenic -60964 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_28_90_0.840868674313872_6.92822897735563_4.94053240855365 chr19 5690716 5691313 + 4.94053240855365 NA intron (NM_022012, intron 3 of 11) intron (NM_022012, intron 3 of 11) 1883 NM_022012 26403 Mm.185026 NM_022012 ENSMUSG00000004054 Map3k11 2610017K16Rik|Mlk3|PTK1|SPRK mitogen-activated protein kinase kinase kinase 11 protein-coding common_peak1_187_1362_0.243785862993521_10.534462778302_4.94022527776381 chr3 133309884 133311127 + 4.94022527776381 NA intron (NM_001293641, intron 1 of 11) CpG 395 NM_146141 74776 Mm.210305 NM_146141 ENSMUSG00000028013 Ppa2 1110013G13Rik|Sid6306 pyrophosphatase (inorganic) 2 protein-coding common_peak2_98_923_-0.330294577601894_9.68660175261511_4.93998261711004 chr13 73937279 73939192 + 4.93998261711004 NA promoter-TSS (NM_027182) promoter-TSS (NM_027182) 424 NM_001308041 105246 Mm.278509 NM_001024508 ENSMUSG00000057649 Brd9 AL022779 bromodomain containing 9 protein-coding common_peak2_148_996_0.283475307709425_10.1031873482529_4.93740657855643 chr2 37421970 37423786 + 4.93740657855643 NA promoter-TSS (NM_001100591) promoter-TSS (NM_001100591) 25 NM_001100591 319817 Mm.288785 NM_001100591 ENSMUSG00000075376 Rc3h2 2900024N03Rik|9430019J22Rik|D930043C02Rik|Mnab|Rnf164 ring finger and CCCH-type zinc finger domains 2 protein-coding common_peak1_218_2245_-0.206688669861688_11.0297978774698_4.93707927990989 chr9 45905902 45907719 + 4.93707927990989 NA promoter-TSS (NM_001310839) promoter-TSS (NM_001310839) 67 NM_178709 235315 Mm.3255 NM_178709 ENSMUSG00000042790 Rnf214 D130054N24Rik ring finger protein 214 protein-coding unique_peak2_35_318_-0.586114940705846_8.02435514341195_4.93574348110061 chr15 100754241 100755595 + 4.93574348110061 NA Intergenic IMPB_01|Satellite|Satellite -6829 NM_021530 59033 Mm.209856 NM_021530 ENSMUSG00000023032 Slc4a8 AW493845|C230026C11|NDCBE|kNBC-3 solute carrier family 4 (anion exchanger), member 8 protein-coding common_peak1_56_510_-0.452680761387448_8.7708391002439_4.93539898255442 chr13 20793990 20794869 + 4.93539898255442 NA exon (NM_012054, exon 1 of 21) exon (NM_012054, exon 1 of 21) 316 NM_012054 27052 Mm.314046 NM_012054 ENSMUSG00000021322 Aoah 4930433E13Rik acyloxyacyl hydrolase protein-coding common_peak1_147_987_0.284641041999446_10.0906877525844_4.93468837468872 chr5 130144114 130145830 + 4.93468837468872 NA promoter-TSS (NM_172509) promoter-TSS (NM_172509) 84 NM_172509 212919 Mm.55812 NM_172509 ENSMUSG00000034110 Kctd7 4932409E18|9430010P06Rik potassium channel tetramerisation domain containing 7 protein-coding common_peak2_195_1979_-0.221183855683575_10.8406927871252_4.93420729098196 chr3 108561429 108563897 + 4.93420729098196 NA promoter-TSS (NM_026198) promoter-TSS (NM_026198) -197 NM_026198 67495 Mm.32615 NM_026198 ENSMUSG00000068732 Tmem167b 2010200O16Rik transmembrane protein 167B protein-coding common_peak1_62_567_-0.428137959552899_8.93567813972823_4.9340120158352 chr7 139149746 139150813 + 4.9340120158352 NA intron (NM_001162540, intron 1 of 11) intron (NM_001162540, intron 1 of 11) 38215 NM_021302 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding common_peak1_240_1894_0.207869362196195_10.9919168141566_4.93333815808381 chr4 128726933 128728842 + 4.93333815808381 NA intron (NM_001195083, intron 1 of 6) CpG 316 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic-like 2 (Drosophila) protein-coding common_peak2_47_199_0.596531589503727_7.94212198452659_4.93221614241964 chr5 141062415 141063870 + 4.93221614241964 NA Intergenic Intergenic -62546 NM_175362 108723 Mm.46187 NM_175362 ENSMUSG00000036526 Card11 0610008L17Rik|2410011D02Rik|BIMP3|CARMA1 caspase recruitment domain family, member 11 protein-coding unique_peak2_25_232_-0.708764900013348_7.50980369464761_4.93181882395487 chr18 20868750 20870197 + 4.93181882395487 NA intron (NM_177038, intron 5 of 28) ORR1D2|LTR|ERVL-MaLR 26605 NM_177038 75964 Mm.273769 NM_029491 ENSMUSG00000033382 Trappc8 5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012 trafficking protein particle complex 8 protein-coding common_peak1_25_232_-0.708764900013348_7.50980369464761_4.93181882395487 chr19 12833802 12834374 + 4.93181882395487 NA TTS (NM_134152) TTS (NM_134152) -27689 NM_146702 258697 Mm.223132 NM_146702 ENSMUSG00000046272 Olfr1444 MOR202-4 olfactory receptor 1444 protein-coding common_peak2_46_418_-0.507675346273334_8.45696876056268_4.93176261522518 chr6 28486154 28487708 + 4.93176261522518 NA intron (NM_019776, intron 1 of 23) (TG)n|Simple_repeat|Simple_repeat 6583 NM_019776 56463 Mm.439987 NM_019776 ENSMUSG00000001424 Snd1 AL033314|Tudor-SN staphylococcal nuclease and tudor domain containing 1 protein-coding common_peak1_172_1717_-0.237303789645914_10.6278624263155_4.93102819594557 chr10 119083245 119085068 + 4.93102819594557 NA Intergenic RMER19C|LTR|ERVK -8749 NR_045348 73400 Mm.416864 NR_045348 ENSMUSG00000100681 1700064J06Rik - RIKEN cDNA 1700064J06 gene ncRNA common_peak1_121_1162_-0.29250361923989_10.0373835718533_4.92978058544058 chr9 50527858 50528756 + 4.92978058544058 NA intron (NM_011220, intron 1 of 5) intron (NM_011220, intron 1 of 5) 334 NM_011220 19286 Mm.35856 NM_011220 ENSMUSG00000032067 Pts PTPS 6-pyruvoyl-tetrahydropterin synthase protein-coding common_peak1_101_953_-0.323562367691698_9.73606427215966_4.92972171886936 chr7 16286260 16287129 + 4.92972171886936 NA intron (NM_001136471, intron 1 of 13) CpG 101 NM_001136471 243846 Mm.482401 NM_172297 ENSMUSG00000041375 Ccdc9 2600011L02Rik coiled-coil domain containing 9 protein-coding common_peak1_159_1097_0.270308822184646_10.2358167500975_4.92962698645827 chr11 79518579 79520665 + 4.92962698645827 NA intron (NM_001077496, intron 1 of 1) intron (NM_001077496, intron 1 of 1) 4140 NM_001077496 216984 Mm.439665 NM_001077496 ENSMUSG00000093938 Evi2b Evi-2|Evi2 ecotropic viral integration site 2b protein-coding common_peak1_29_266_-0.652039499089851_7.73467618214263_4.92883076222663 chr7 90383520 90384051 + 4.92883076222663 NA intron (NM_001289583, intron 8 of 19) intron (NM_001289583, intron 8 of 19) -3196 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_151_1485_-0.257017263582638_10.4087097687473_4.92857615593943 chr3 108839277 108840699 + 4.92857615593943 NA intron (NM_011504, intron 1 of 18) CpG 514 NM_011504 20912 Mm.316894 NM_011504 ENSMUSG00000027882 Stxbp3 Munc-18c|Stxbp3a|Sxtbp3|Unc18-3 syntaxin binding protein 3 protein-coding unique_peak2_15_148_-0.922915257336993_6.75771089179366_4.92824351894733 chr1 183788120 183788924 + 4.92824351894733 NA Intergenic Intergenic 245476 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak1_22_61_0.984264493706635_6.44632855724019_4.92751840678451 chr14 66213185 66213756 + 4.92751840678451 NA promoter-TSS (NM_001162366) promoter-TSS (NM_001162366) 82 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_22_61_0.984264493706635_6.44632855724019_4.92751840678451-2 chr14 73046646 73047093 + 4.92751840678451 NA intron (NM_001162412, intron 2 of 4) MIR3|SINE|MIR 2245 NM_133720 70086 Mm.158324 NM_133720 ENSMUSG00000033470 Cysltr2 2300001H05Rik|CYSLT2R|Cltr2|Cyslt2 cysteinyl leukotriene receptor 2 protein-coding unique_peak1_22_61_0.984264493706635_6.44632855724019_4.92751840678451 chr16 20693227 20693732 + 4.92751840678451 NA TTS (NM_145941) TTS (NM_145941) -1578 NM_133778 78408 Mm.196512 NM_133778 ENSMUSG00000050821 Fam131a 2900046G09Rik family with sequence similarity 131, member A protein-coding unique_peak2_12_123_-1.0253873769323_6.44150262192073_4.9275184067845 chr1 165697591 165698478 + 4.9275184067845 NA intron (NM_178593, intron 1 of 6) intron (NM_178593, intron 1 of 6) 10060 NM_178593 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding common_peak1_211_2163_-0.210518396010992_10.9742255858213_4.92743892178358 chr6 47635601 47637645 + 4.92743892178358 NA Intergenic Intergenic 18471 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_71_362_0.454084246249629_8.73086786112057_4.92729627345884 chr1 152624380 152625760 + 4.92729627345884 NA promoter-TSS (NM_016846) promoter-TSS (NM_016846) 41 NM_016846 19731 Mm.245270 NM_016846 ENSMUSG00000026482 Rgl1 Rgl|mKIAA0959 ral guanine nucleotide dissociation stimulator,-like 1 protein-coding common_peak1_245_2565_-0.193115362684615_11.2287477737474_4.92728970180261 chr9 78175580 78177212 + 4.92728970180261 NA intron (NR_040401, intron 1 of 3) intron (NR_040401, intron 1 of 3) 482 NR_040401 320295 Mm.131285 NR_040401 ENSMUSG00000097574 C920006O11Rik - RIKEN cDNA C920006O11 gene ncRNA common_peak2_353_3132_0.16294417801041_11.6948011433763_4.9269089120834 chr1 92801797 92808192 + 4.9269089120834 NA Intergenic Intergenic -26692 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_34_122_0.738931209184294_7.31198010993139_4.92616431662118 chr5 111754515 111755422 + 4.92616431662118 NA intron (NR_045833, intron 1 of 4) intron (NR_045833, intron 1 of 4) 6760 NR_045832 269683 Mm.136946 NM_207252 ENSMUSG00000085271 E130006D01Rik Gm16018|Gm681|OTTMUSG00000029083 RIKEN cDNA E130006D01 gene ncRNA unique_peak2_60_285_0.504648114268583_8.41219539391268_4.9257809986699 chr5 110978709 110980672 + 4.9257809986699 NA intron (NM_001267622, intron 2 of 22) CpG -24454 NR_030482 735278 NR_030482 ENSMUSG00000076163 Mir701 Mirn701|mir-701|mmu-mir-701 microRNA 701 ncRNA common_peak2_256_2061_0.199773031788567_11.1097151332624_4.92562485168588 chr10 50591620 50593701 + 4.92562485168588 NA promoter-TSS (NM_198007) promoter-TSS (NM_198007) -9 NM_198007 77987 Mm.222497 NM_198007 ENSMUSG00000038774 Ascc3 ASC1p200|B630009I04Rik|BC023451|D430001L07Rik|D630041L21|Helic1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding common_peak1_24_223_-0.72133972992122_7.44668505709699_4.92516739750615 chr12 76086595 76087133 + 4.92516739750615 NA intron (NM_001005510, intron 99 of 115) intron (NM_001005510, intron 99 of 115) 90395 NM_010157 13983 Mm.2561 NM_010157 ENSMUSG00000021055 Esr2 ER[b]|ERbeta|Estrb estrogen receptor 2 (beta) protein-coding common_peak2_168_1181_0.260799528351878_10.3374140843535_4.92497137819541 chr2 51933538 51935973 + 4.92497137819541 NA promoter-TSS (NM_001141982) promoter-TSS (NM_001141982) -111 NM_001141982 71684 Mm.28309 NM_030243 ENSMUSG00000036249 Rbm43 0610033I05Rik RNA binding motif protein 43 protein-coding common_peak2_23_214_-0.734417381497366_7.38098415884078_4.92305545906917 chr11 119643483 119644314 + 4.92305545906917 NA intron (NM_028898, intron 1 of 33) intron (NM_028898, intron 1 of 33) 40993 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak1_23_214_-0.734417381497366_7.38098415884078_4.92305545906917 chr2 26337451 26338073 + 4.92305545906917 NA intron (NM_153410, intron 9 of 13) IAPEz-int|LTR|ERVK 14348 NM_026828 52838 Mm.31239 NM_026828 ENSMUSG00000075467 Dnlz 1110034G11Rik|D2Bwg1335e|HEP1 DNL-type zinc finger protein-coding common_peak1_87_482_0.39714298623089_9.11445087195122_4.92202676215936 chr8 124281648 124282980 + 4.92202676215936 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 50920 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_102_964_-0.322837248378704_9.75296650796609_4.92160363079102 chr18 64999817 65002246 + 4.92160363079102 NA intron (NM_001114386, intron 2 of 30) intron (NM_001114386, intron 2 of 30) -22496 NM_031881 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding common_peak1_32_292_-0.617436906761369_7.88603840104156_4.92121951564076 chr16 90995171 90995727 + 4.92121951564076 NA intron (NM_001045515, intron 2 of 32) intron (NM_001045515, intron 2 of 32) 15646 NM_001045515 104015 Mm.187079 NM_001045515 ENSMUSG00000022973 Synj1 A930006D20Rik|AA675315|mKIAA0910 synaptojanin 1 protein-coding common_peak1_32_292_-0.617436906761369_7.88603840104156_4.92121951564076-2 chr7 90006532 90007336 + 4.92121951564076 NA Intergenic Intergenic -22225 NR_110365 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15 RIKEN cDNA E230029C05 gene ncRNA common_peak1_67_334_0.468743598001748_8.62238908434601_4.92032213016605 chr7 126272364 126273367 + 4.92032213016605 NA 5' UTR (NM_145587, exon 1 of 4) 5' UTR (NM_145587, exon 1 of 4) 246 NM_145587 104175 Mm.29660 NM_145587 ENSMUSG00000042978 Sbk1 Sbk SH3-binding kinase 1 protein-coding common_peak2_167_1172_0.261324279329058_10.326649437693_4.91953083140994 chr11 119670224 119672583 + 4.91953083140994 NA intron (NM_028898, intron 3 of 33) intron (NM_028898, intron 3 of 33) 68498 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak1_103_974_-0.320612541623328_9.76895213782531_4.91920683666017 chr8 26014788 26016029 + 4.91920683666017 NA exon (NM_008033, exon 1 of 9) exon (NM_008033, exon 1 of 9) 193 NM_008033 14272 Mm.3496 NM_008033 ENSMUSG00000015994 Fnta FTA farnesyltransferase, CAAX box, alpha protein-coding common_peak2_63_576_-0.422949623147602_8.96095269707168_4.91842338039298 chr9 21148001 21150297 + 4.91842338039298 NA intron (NM_016742, intron 1 of 7) intron (NM_016742, intron 1 of 7) 757 NM_016742 12539 Mm.32331 NM_016742 ENSMUSG00000019471 Cdc37 p50|p50Cdc37 cell division cycle 37 protein-coding common_peak1_63_576_-0.422949623147602_8.96095269707168_4.91842338039298 chr4 130016781 130018096 + 4.91842338039298 NA intron (NM_173071, intron 24 of 29) intron (NM_173071, intron 24 of 29) 25384 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding common_peak1_39_151_0.669819025373547_7.58283702613036_4.91838360259883-2 chr8 120680743 120681378 + 4.91838360259883 NA Intergenic Intergenic 12740 NM_001293559 12857 Mm.386758 NM_009941 ENSMUSG00000031818 Cox4i1 AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1 cytochrome c oxidase subunit IV isoform 1 protein-coding common_peak1_39_151_0.669819025373547_7.58283702613036_4.91838360259883 chr11 30181280 30182196 + 4.91838360259883 NA intron (NM_175836, intron 1 of 34) intron (NM_175836, intron 1 of 34) 16519 NM_009260 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak2_543_5449_0.124557302354301_12.4743191657288_4.91735028683627 chr8 122429036 122434174 + 4.91735028683627 NA intron (NM_001301284, intron 1 of 4) intron (NM_001301284, intron 1 of 4) 1335 NM_001301284 13057 Mm.271671 NM_007806 ENSMUSG00000006519 Cyba b558|nmf333|p22-phox|p22phox cytochrome b-245, alpha polypeptide protein-coding common_peak1_156_1070_0.272732869655393_10.201109199578_4.91691114038893 chr14 56287022 56289173 + 4.91691114038893 NA Intergenic Intergenic -25837 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak2_45_187_0.610484263602228_7.85983098347875_4.91679877185592 chr18 52465529 52466327 + 4.91679877185592 NA intron (NM_026040, intron 1 of 7) CpG 235 NM_026040 67222 Mm.100617 NM_026040 ENSMUSG00000024528 Srfbp1 2810036K01Rik|p49/STRAP serum response factor binding protein 1 protein-coding common_peak2_93_872_-0.340094445017066_9.59979062112091_4.91636254922574 chr10 21945982 21948010 + 4.91636254922574 NA intron (NM_001161845, intron 2 of 13) intron (NM_001161845, intron 2 of 13) -31676 NM_001161847 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_105_994_-0.316198638801543_9.80045339603024_4.91529579899695 chr6 37821768 37822946 + 4.91529579899695 NA Intergenic MTA_Mm|LTR|ERVL-MaLR -48454 NM_001272064 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak2_57_519_-0.447092187329529_8.79882171936369_4.91404205361513 chr1 4857039 4858650 + 4.91404205361513 NA promoter-TSS (NM_001159751) promoter-TSS (NM_001159751) 150 NM_011541 21399 Mm.207263 NM_011541 ENSMUSG00000033813 Tcea1 S-II transcription elongation factor A (SII) 1 protein-coding common_peak2_31_106_0.781398587910378_7.13216628035634_4.91321049934168 chr8 35665969 35666749 + 4.91321049934168 NA intron (NM_001081279, intron 2 of 2) intron (NM_001081279, intron 2 of 2) -77339 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_31_106_0.781398587910378_7.13216628035634_4.91321049934168 chr10 7063577 7064121 + 4.91321049934168 NA Intergenic Intergenic -40664 NM_001033391 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak1_37_336_-0.569628266598612_8.11179064788255_4.91255803900402 chr15 79062380 79062915 + 4.91255803900402 NA exon (NM_144849, exon 1 of 8) exon (NM_144849, exon 1 of 8) 212 NM_144849 223690 Mm.24262 NM_144849 ENSMUSG00000033055 Ankrd54 C730048E16Rik|EST1068184|EST475269|Liar ankyrin repeat domain 54 protein-coding unique_peak1_20_52_1.0495541892353_6.25269754918085_4.91182617373708 chr10 26778958 26779478 + 4.91182617373708 NA intron (NM_176837, intron 1 of 14) intron (NM_176837, intron 1 of 14) 6706 NM_176837 73910 Mm.356496 NM_176837 ENSMUSG00000039031 Arhgap18 4833419J07Rik|AI314906|AI843501 Rho GTPase activating protein 18 protein-coding unique_peak1_20_52_1.0495541892353_6.25269754918085_4.91182617373708-2 chr2 167315982 167316484 + 4.91182617373708 NA intron (NM_019835, intron 1 of 8) MTE2a|LTR|ERVL-MaLR 32945 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak1_27_85_0.860299995315827_6.85641475236001_4.91119771915107-3 chr6 29528028 29528626 + 4.91119771915107 NA promoter-TSS (NM_001252382) promoter-TSS (NM_001252382) -955 NM_001252382 27056 Mm.6479 NM_012057 ENSMUSG00000029771 Irf5 AW491843|mirf5 interferon regulatory factor 5 protein-coding common_peak1_27_85_0.860299995315827_6.85641475236001_4.91119771915107 chr11 70813692 70814119 + 4.91119771915107 NA Intergenic PB1D9|SINE|Alu -1344 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak1_27_85_0.860299995315827_6.85641475236001_4.91119771915107-2 chr11 98931107 98931726 + 4.91119771915107 NA Intergenic MIR3|SINE|MIR -6280 NM_009024 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_27_85_0.860299995315827_6.85641475236001_4.91119771915107-4 chr9 21148038 21148694 + 4.91119771915107 NA intron (NM_016742, intron 1 of 7) intron (NM_016742, intron 1 of 7) 1540 NM_016742 12539 Mm.32331 NM_016742 ENSMUSG00000019471 Cdc37 p50|p50Cdc37 cell division cycle 37 protein-coding common_peak1_16_156_-0.891084487917455_6.8490785049329_4.91119771915105 chr6 86593447 86593922 + 4.91119771915105 NA Intergenic B3|SINE|B2 -34490 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak1_16_156_-0.891084487917455_6.8490785049329_4.91119771915105-2 chr7 128029697 128030145 + 4.91119771915105 NA Intergenic Intergenic 25543 NM_001079932 434246 Mm.389924 NM_001079932 ENSMUSG00000042828 Trim72 BC067209|MG53 tripartite motif-containing 72 protein-coding common_peak1_28_257_-0.662563940910686_7.67994528496791_4.90831842140583 chr17 46159754 46160234 + 4.90831842140583 NA Intergenic MIR3|SINE|MIR -1038 NM_019581 56055 Mm.22147 NM_019581 ENSMUSG00000023952 Gtpbp2 nmf205 GTP binding protein 2 protein-coding common_peak1_60_548_-0.436142887958226_8.88259089502609_4.90781207317028 chr17 73008648 73009901 + 4.90781207317028 NA Intergenic Intergenic 90969 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_156_1539_-0.251239001176614_10.463095134994_4.90765159045861 chr19 21912481 21914154 + 4.90765159045861 NA Intergenic Intergenic 134977 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak2_108_1025_-0.311072780077417_9.84727862556834_4.90650108724489 chr15 94588904 94590559 + 4.90650108724489 NA promoter-TSS (NM_008971) promoter-TSS (NM_008971) 93 NM_008971 19230 Mm.490250 NM_008971 ENSMUSG00000022451 Twf1 A6|Ptk9|twinfilin twinfilin actin binding protein 1 protein-coding common_peak2_95_892_-0.335516274656415_9.63475822779301_4.90604735641289 chr4 16161511 16163822 + 4.90604735641289 NA intron (NM_138952, intron 1 of 10) intron (NM_138952, intron 1 of 10) 832 NM_138952 192656 Mm.112765 NM_138952 ENSMUSG00000041135 Ripk2 2210420D18Rik|CARD3|CARDIAK|CCK|D4Bwg0615e|RICK|RIP2 receptor (TNFRSF)-interacting serine-threonine kinase 2 protein-coding unique_peak2_21_197_-0.769558877385658_7.24457718138678_4.90501429060816 chr2 132022003 132023469 + 4.90501429060816 NA intron (NM_175445, intron 1 of 10) intron (NM_175445, intron 1 of 10) 7252 NM_175445 215653 Mm.204737 NM_175445 ENSMUSG00000027339 Rassf2 3830431H01Rik|9030412M04Rik|AI852669|AW495050 Ras association (RalGDS/AF-6) domain family member 2 protein-coding common_peak1_21_197_-0.769558877385658_7.24457718138678_4.90501429060816 chr6 41540561 41541087 + 4.90501429060816 NA Intergenic Intergenic 19048 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak1_249_1988_0.202905529367317_11.0592803255174_4.90473109601379 chr15 76293742 76295951 + 4.90473109601379 NA exon (NM_001195537, exon 1 of 7) exon (NM_001195537, exon 1 of 7) 412 NM_001195537 100503915 Mm.393455 NM_001195537 ENSMUSG00000071724 Smpd5 ENSMUSG00000071724|Gm10345|MA-nSMase sphingomyelin phosphodiesterase 5 protein-coding common_peak2_52_472_-0.469954607896282_8.65071906939125_4.90466949423444 chr8 105224571 105225993 + 4.90466949423444 NA promoter-TSS (NM_145604) promoter-TSS (NM_145604) 94 NM_145604 234678 Mm.27186 NM_145604 ENSMUSG00000031889 D230025D16Rik BC006874|Lin10 RIKEN cDNA D230025D16 gene protein-coding common_peak1_72_370_0.447043649764826_8.75879720150322_4.90450861979896 chr9 65545399 65546393 + 4.90450861979896 NA Intergenic Intergenic 34191 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_17_164_-0.861636852373149_6.93550378805924_4.90309066036266 chr7 122101450 122101819 + 4.90309066036266 NA intron (NM_028177, intron 1 of 4) CpG 214 NM_028177 70316 Mm.3014 NM_028177 ENSMUSG00000030869 Ndufab1 2210401F17Rik|2310039H15Rik|2610003B19Rik|8kDa|9130423F15Rik|ACP|CI-SDAP|SDAP NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 protein-coding unique_peak2_17_164_-0.861636852373149_6.93550378805924_4.90309066036266 chr9 78073399 78074429 + 4.90309066036266 NA Intergenic L1M2|LINE|L1 21956 NM_008103 14531 Mm.1400 NM_008103 ENSMUSG00000023333 Gcm1 GCMa|Gcm-rs2|Gcm1-rs1|glide glial cells missing homolog 1 (Drosophila) protein-coding common_peak1_18_172_-0.834264024239834_7.01749621551681_4.90248660055133 chr14 78910066 78910546 + 4.90248660055133 NA intron (NM_173758, intron 3 of 25) B1_Mus2|SINE|Alu 61128 NM_173758 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding common_peak1_18_172_-0.834264024239834_7.01749621551681_4.90248660055133-2 chr5 134233619 134234113 + 4.90248660055133 NA Intergenic B1_Mus1|SINE|Alu -4241 NR_104383 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding unique_peak2_18_172_-0.834264024239834_7.01749621551681_4.90248660055133 chr3 154596569 154597407 + 4.90248660055133 NA exon (NM_172474, exon 1 of 6) exon (NM_172474, exon 1 of 6) 110 NM_001168358 209584 Mm.347513 NM_172474 ENSMUSG00000047583 Tyw3 5230400J09Rik tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) protein-coding common_peak1_34_309_-0.594678690750705_7.97878505989889_4.90211626208217 chr2 25548712 25549488 + 4.90211626208217 NA Intergenic Intergenic -2160 NM_009422 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding common_peak2_34_309_-0.594678690750705_7.97878505989889_4.90211626208217 chr5 146824190 146825376 + 4.90211626208217 NA Intergenic Intergenic -8107 NM_019647 19933 Mm.316592 NM_019647 ENSMUSG00000041453 Rpl21 8430440E03Rik|L21 ribosomal protein L21 protein-coding common_peak1_96_902_-0.333243814117449_9.65196027042213_4.90147632058152 chr8 36181504 36182986 + 4.90147632058152 NA Intergenic Intergenic 67271 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding common_peak1_130_837_0.306280828147521_9.86394684777311_4.90086979478601 chr13 74639445 74640454 + 4.90086979478601 NA promoter-TSS (NM_030711) promoter-TSS (NM_030711) 77 NM_030711 80898 Mm.83526 NM_030711 ENSMUSG00000021583 Erap1 Arts1|ERAAP|PILSA|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding common_peak2_305_2592_0.178011113613803_11.4294120476602_4.90013397999015 chr6 72898309 72900994 + 4.90013397999015 NA 5' UTR (NM_019715, exon 1 of 7) 5' UTR (NM_019715, exon 1 of 7) 328 NM_019715 74287 Mm.29194 NM_019715 ENSMUSG00000055239 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 protein-coding common_peak2_45_408_-0.510883917661884_8.42051507411081_4.89888869532853 chr7 27932550 27934117 + 4.89888869532853 NA Intergenic ID_B1|SINE|B4 -3903 NM_028538 73430 Mm.379224 NM_028538 ENSMUSG00000070709 Zfp974 1700049G17Rik|AV321011|BB026409 zinc finger protein 974 protein-coding common_peak1_127_811_0.31075427949906_9.82071305693471_4.89847991086821 chr3 95929035 95930563 + 4.89847991086821 NA intron (NM_001253758, intron 1 of 4) CpG 542 NM_023210 66471 Mm.218657 NM_023210 ENSMUSG00000015749 Anp32e 2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding common_peak1_179_1286_0.249606921716643_10.454599799079_4.89772881706144 chr18 75005122 75006659 + 4.89772881706144 NA promoter-TSS (NM_001001181) promoter-TSS (NM_001001181) -10 NM_001001181 407819 Mm.29866 NM_001001181 ENSMUSG00000036299 BC031181 - cDNA sequence BC031181 protein-coding unique_peak2_7_83_-1.32267647083995_5.73097918735879_4.89755851069968 chr3 84045801 84046557 + 4.89755851069968 NA Intergenic MLT1A0|LTR|ERVL-MaLR -6018 NM_172681 229473 Mm.28838 NM_172681 ENSMUSG00000033767 D930015E06Rik Kiaa0922|mKIAA0922 RIKEN cDNA D930015E06 gene protein-coding common_peak2_122_768_0.318737993256883_9.74620878459027_4.89742678922651 chr2 181837338 181838813 + 4.89742678922651 NA intron (NM_001291211, intron 1 of 6) CpG 221 NM_001291211 245867 Mm.491085 NM_153594 ENSMUSG00000027589 Pcmtd2 5330414D10Rik|AI314201 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 protein-coding common_peak1_22_206_-0.755026153405815_7.31597388079642_4.89742424666378 chr1 91539830 91540385 + 4.89742424666378 NA promoter-TSS (NM_001039126) promoter-TSS (NM_001039126) -458 NM_001039126 65247 Mm.234152 NM_023046 ENSMUSG00000026311 Asb1 1700029O08Rik|1700054C17Rik|AI426616|AI851378|mKIAA1146 ankyrin repeat and SOCS box-containing 1 protein-coding common_peak1_125_794_0.31341042096642_9.79151626065493_4.89630158164449 chr17 83311915 83313124 + 4.89630158164449 NA Intergenic Intergenic -38412 NM_001114361 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding common_peak2_113_1077_-0.303030432015975_9.92262624674452_4.89592352178146 chr9 101033934 101035613 + 4.89592352178146 NA exon (NM_025835, exon 1 of 15) exon (NM_025835, exon 1 of 15) 111 NM_001311149 66904 Mm.335385 NM_025835 ENSMUSG00000032527 Pccb 1300012P06Rik|AI314687|R74805 propionyl Coenzyme A carboxylase, beta polypeptide protein-coding common_peak1_433_4077_0.143184565169536_12.0652383426014_4.89581081525773 chr9 32539359 32543110 + 4.89581081525773 NA 5' UTR (NM_008026, exon 1 of 9) 5' UTR (NM_008026, exon 1 of 9) 218 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_180_1807_-0.230971646938826_10.7046931389458_4.89501909390961 chr17 84957771 84959027 + 4.89501909390961 NA promoter-TSS (NR_027930) promoter-TSS (NR_027930) 398 NM_001159496 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak1_64_586_-0.420302172777156_8.98706560672147_4.8947408975696 chr11 115563758 115564696 + 4.8947408975696 NA promoter-TSS (NM_001002929) promoter-TSS (NM_001002929) -217 NM_001002929 445007 Mm.4379 NM_001002929 ENSMUSG00000020739 Nup85 Pcnt1|frount nucleoporin 85 protein-coding common_peak2_64_586_-0.420302172777156_8.98706560672147_4.8947408975696 chrX 7789035 7790546 + 4.8947408975696 NA promoter-TSS (NM_001290455) promoter-TSS (NM_001290455) -203 NM_001290455 54645 Mm.194811 NM_207670 ENSMUSG00000031153 Gripap1 AI854681|DXImx47e|GRASP-1|Sfc10|mKIAA1167 GRIP1 associated protein 1 protein-coding common_peak2_126_803_0.311159002995117_9.80663119267649_4.89471846209173 chr3 95929172 95930636 + 4.89471846209173 NA intron (NM_001253758, intron 1 of 4) CpG 647 NM_023210 66471 Mm.218657 NM_023210 ENSMUSG00000015749 Anp32e 2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding unique_peak2_5_67_-1.52691199553095_5.32400684348486_4.89407448190068 chr9 61022790 61023475 + 4.89407448190068 NA Intergenic Intergenic 6063 NR_040767 330956 Mm.207985 NR_040767 ENSMUSG00000111290 Gm5122 A430102L10 predicted gene 5122 ncRNA unique_peak1_13_24_1.41609624905685_5.35190431430315_4.89407448190067 chr11 67573831 67574136 + 4.89407448190067 NA intron (NM_008088, intron 1 of 13) intron (NM_008088, intron 1 of 13) -12517 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding unique_peak1_13_24_1.41609624905685_5.35190431430315_4.89407448190067-2 chr19 9067571 9067951 + 4.89407448190067 NA intron (NR_104460, intron 6 of 6) intron (NR_104460, intron 6 of 6) 20195 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_115_1098_-0.300087734063951_9.95193180391726_4.89259488080268 chr3 90212869 90213754 + 4.89259488080268 NA promoter-TSS (NM_001293741) promoter-TSS (NM_001293741) 336 NM_001190258 100043813 Mm.270283 NM_001190258 ENSMUSG00000050621 Rps27rt ENSMUSG00000050621|Gm9846|Rps27l2 ribosomal protein S27, retrogene protein-coding common_peak1_161_1117_0.266249921336044_10.2598294335112_4.89257048408242 chr9 32594471 32596104 + 4.89257048408242 NA Intergenic Intergenic -53835 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_192_1412_0.238259542112319_10.5836755213901_4.89219118808897 chr19 10687913 10689713 + 4.89219118808897 NA promoter-TSS (NM_181403) promoter-TSS (NM_181403) -2 NM_181403 107305 Mm.19091 NM_181403 ENSMUSG00000048832 Vps37c 5730409F24Rik|AU042646 vacuolar protein sorting 37C protein-coding common_peak1_78_414_0.425131564879029_8.9095333086738_4.89076848053584 chr8 88635113 88636196 + 4.89076848053584 NA intron (NM_027840, intron 1 of 3) intron (NM_027840, intron 1 of 3) 474 NM_027840 71607 Mm.270607 NM_027840 ENSMUSG00000031662 Snx20 9130017C17Rik sorting nexin 20 protein-coding common_peak1_27_248_-0.673437182050155_7.623283341043_4.89053092742554 chr15 76192917 76193341 + 4.89053092742554 NA intron (NM_201385, intron 5 of 31) intron (NM_201385, intron 5 of 31) 2581 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_69_348_0.460974799500237_8.67757062595977_4.89011838125193 chr17 34135385 34137215 + 4.89011838125193 NA intron (NM_010386, intron 2 of 5) intron (NM_010386, intron 2 of 5) -9116 NM_010388 15000 Mm.195060 NM_010388 ENSMUSG00000037548 H2-DMb2 H-2Mb2|H2-Mb2 histocompatibility 2, class II, locus Mb2 protein-coding unique_peak2_20_189_-0.79238096453245_7.17366512606472_4.88778974633772 chr2 30794473 30795433 + 4.88778974633772 NA TTS (NR_028487) TTS (NR_028487) 6784 NM_198000 73598 Mm.34166 NM_198000 ENSMUSG00000044320 1700001O22Rik 1700113K14Rik|4930549G18Rik RIKEN cDNA 1700001O22 gene protein-coding unique_peak2_20_189_-0.79238096453245_7.17366512606472_4.88778974633772-2 chr8 57611159 57612151 + 4.88778974633772 NA intron (NM_144731, intron 1 of 11) intron (NM_144731, intron 1 of 11) -40098 NR_040698 100502619 Mm.393851 NR_040698 AW046200 - expressed sequence AW046200 ncRNA common_peak2_159_1098_0.268995490240613_10.2364734160695_4.88697702571792 chr9 107626444 107631304 + 4.88697702571792 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 6468 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak2_26_80_0.882357563954971_6.78102878486211_4.88652649966563 chr3 104790375 104791088 + 4.88652649966563 NA intron (NM_001291859, intron 1 of 4) intron (NM_001291859, intron 1 of 4) 1697 NM_007484 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding common_peak2_73_672_-0.38806673221255_9.20042932850404_4.88535832139043 chrX 107216955 107219179 + 4.88535832139043 NA Intergenic Intergenic -37811 NM_001177781 213439 Mm.383562 NM_001033251 ENSMUSG00000073008 Gpr174 Gm376|Lypsr3 G protein-coupled receptor 174 protein-coding common_peak2_58_529_-0.444322144408737_8.82768747724619_4.88388829397453 chr13 48877865 48879223 + 4.88388829397453 NA TTS (NM_001033268) TTS (NM_001033268) -7659 NM_011078 18676 Mm.486213 NM_011078 ENSMUSG00000038025 Phf2 GRC5 PHD finger protein 2 protein-coding common_peak1_58_529_-0.444322144408737_8.82768747724619_4.88388829397453 chr6 134829411 134830031 + 4.88388829397453 NA promoter-TSS (NM_177687) promoter-TSS (NM_177687) -478 NM_177687 232430 Mm.267010 NM_177687 ENSMUSG00000032652 Crebl2 AI046348|B230205M03 cAMP responsive element binding protein-like 2 protein-coding common_peak2_36_134_0.702968054160579_7.42829962413112_4.88352646535398 chr9 63747956 63748734 + 4.88352646535398 NA intron (NM_016769, intron 1 of 8) MIRb|SINE|MIR 9649 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_36_134_0.702968054160579_7.42829962413112_4.88352646535398-2 chr19 41369946 41370713 + 4.88352646535398 NA intron (NM_031376, intron 2 of 16) MER5A|DNA|hAT-Charlie 14741 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_36_134_0.702968054160579_7.42829962413112_4.88352646535398-3 chr5 72559178 72559746 + 4.88352646535398 NA intron (NM_133921, intron 1 of 22) CpG 183 NM_133921 100978 Mm.187453 NM_133921 ENSMUSG00000072889 Nfxl1 1700012H24Rik|AW538212|D430033A06Rik|DNABF|GCF|Gm1058|TCF9 nuclear transcription factor, X-box binding-like 1 protein-coding common_peak1_36_134_0.702968054160579_7.42829962413112_4.88352646535398 chr12 104065292 104065714 + 4.88352646535398 NA Intergenic Intergenic -12456 NR_002861 321018 Mm.297023 NR_002861 Serpina4-ps1 KALps|Klst serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1 pseudo common_peak2_348_3839_-0.15579029834425_11.8289954464364_4.8829446529762 chr10 128742454 128749037 + 4.8829446529762 NA Intergenic Intergenic -1689 NM_016811 13139 Mm.291235 NM_016811 ENSMUSG00000025357 Dgka 80kDa|AW146112|Dagk1 diacylglycerol kinase, alpha protein-coding common_peak1_50_454_-0.482051957958602_8.58869675610676_4.88293133426809 chr18 46200510 46201271 + 4.88293133426809 NA intron (NM_178872, intron 1 of 9) Lx8|LINE|L1 -2072 NM_001170855 28105 Mm.277382 NM_178872 ENSMUSG00000033949 Trim36 D18Wsu100e|haprin tripartite motif-containing 36 protein-coding common_peak1_69_633_-0.400281004429518_9.10819852792465_4.88263964641224 chr8 71908454 71909205 + 4.88263964641224 NA intron (NM_001166645, intron 1 of 2) CpG 223 NM_001166645 382019 Mm.251482 NM_001166645 ENSMUSG00000089857 Zfp882 ENSMUSG00000052439|Gm15468|OTTMUSG00000022410 zinc finger protein 882 protein-coding common_peak2_145_971_0.284118833966206_10.0668719205889_4.88008197781037 chr11 106611900 106613940 + 4.88008197781037 NA promoter-TSS (NM_198292) promoter-TSS (NM_198292) 10 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding common_peak2_85_467_0.4019747618569_9.07135210051186_4.87917019011125 chr10 95745220 95746900 + 4.87917019011125 NA Intergenic Intergenic -181893 NM_027722 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak1_53_481_-0.46406945820401_8.68085460712796_4.87896546919416 chrX 103616328 103616937 + 4.87896546919416 NA intron (NR_028380, intron 1 of 10) intron (NR_028380, intron 1 of 10) 7122 NR_028381 78878 Mm.259724 NR_028380 ENSMUSG00000086370 Ftx B230206F22Rik|BB219131|NCRNA00182|Thcytx Ftx transcript, Xist regulator (non-protein coding) ncRNA common_peak1_157_1080_0.270560594565023_10.2134311050172_4.87807221816947 chr12 104751053 104752739 + 4.87807221816947 NA promoter-TSS (NM_148948) promoter-TSS (NM_148948) 56 NM_148948 192119 Mm.21135 NM_148948 ENSMUSG00000041415 Dicer1 1110006F08Rik|D12Ertd7e|mKIAA0928 dicer 1, ribonuclease type III protein-coding common_peak1_144_962_0.285376913547431_10.0540804446172_4.8775993189926 chr11 106611988 106613910 + 4.8775993189926 NA promoter-TSS (NM_198292) promoter-TSS (NM_198292) -19 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding common_peak2_213_2185_-0.208494955129776_10.989830208107_4.87742285029278 chr17 46888837 46891691 + 4.87742285029278 NA promoter-TSS (NM_178385) promoter-TSS (NM_178385) -357 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding common_peak2_347_3065_0.163880471379787_11.6640822173487_4.87695801560374 chr13 24507850 24516078 + 4.87695801560374 NA Intergenic Intergenic -70225 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak2_48_435_-0.491308087866242_8.52253028084381_4.87690543174373 chr9 63781452 63783388 + 4.87690543174373 NA Intergenic LTR16C|LTR|ERVL -24426 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak2_6_75_-1.41458738579837_5.5406338205444_4.87581895109211 chr1 172507235 172507741 + 4.87581895109211 NA TTS (NM_178598) TTS (NM_178598) 7242 NM_178598 21346 Mm.271711 NM_178598 ENSMUSG00000026547 Tagln2 2700094C18Rik|SM22beta|Sm22B|Sm22a transgelin 2 protein-coding unique_peak2_6_75_-1.41458738579837_5.5406338205444_4.87581895109211-2 chr13 23424649 23425314 + 4.87581895109211 NA Intergenic Intergenic -1115 NM_013924 30946 Mm.292094 NM_013924 ENSMUSG00000036376 Abt1 - activator of basal transcription 1 protein-coding unique_peak2_6_75_-1.41458738579837_5.5406338205444_4.87581895109211-3 chr14 14702221 14702901 + 4.87581895109211 NA promoter-TSS (NM_001033270) promoter-TSS (NM_001033270) -464 NM_001033270 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding common_peak1_36_327_-0.577768353406674_8.06866782791475_4.87547502027418 chr5 96912354 96913056 + 4.87547502027418 NA Intergenic Intergenic -8567 NR_131152 666266 Mm.32442 NR_131152 ENSMUSG00000106357 Gm8013 EG666266 predicted gene 8013 ncRNA common_peak2_36_327_-0.577768353406674_8.06866782791475_4.87547502027418 chr15 103272752 103273485 + 4.87547502027418 NA intron (NM_019817, intron 1 of 8) intron (NM_019817, intron 1 of 8) 200 NM_019817 56447 Mm.29473 NM_019817 ENSMUSG00000060992 Copz1 5930435A22Rik|AA407760|D4Ertd360e coatomer protein complex, subunit zeta 1 protein-coding unique_peak2_33_117_0.747505522798686_7.25639581076118_4.87510768217794 chr16 94723899 94724990 + 4.87510768217794 NA Intergenic Intergenic 132246 NM_001025590 16522 Mm.328720 NM_010606 ENSMUSG00000043301 Kcnj6 BIR1|GIRK2|KATP2|KCNJ7|Kir3.2|weaver|wv potassium inwardly-rectifying channel, subfamily J, member 6 protein-coding common_peak1_38_344_-0.557509102057671_8.1516980006367_4.87469176095904 chr4 74251206 74251795 + 4.87469176095904 NA promoter-TSS (NM_144787) promoter-TSS (NM_144787) -379 NM_144787 76804 Mm.209059 NM_144787 ENSMUSG00000028397 Kdm4c 2410141F18Rik|AA517467|Gasc1|Jmjd2c lysine (K)-specific demethylase 4C protein-coding unique_peak2_9_98_-1.16483470363519_6.04693926826201_4.87441766081204 chr3 65515301 65515958 + 4.87441766081204 NA Intergenic B1_Mur3|SINE|Alu -12818 NM_178892 99929 Mm.246398 NM_178892 ENSMUSG00000034640 Tiparp ARTD14|AW558171|PARP7 TCDD-inducible poly(ADP-ribose) polymerase protein-coding common_peak1_232_2408_-0.198107117364621_11.1351651195562_4.87412501439551 chr11 6546031 6548290 + 4.87412501439551 NA intron (NM_001190343, intron 1 of 8) CpG 273 NM_001190343 216527 Mm.221271 NM_146014 ENSMUSG00000000378 Ccm2 BC029157 cerebral cavernous malformation 2 protein-coding common_peak1_92_861_-0.340727338201509_9.58118038998834_4.87407565529153 chr9 106885999 106887411 + 4.87407565529153 NA TTS (NM_029103) TTS (NM_029103) 295 NM_175402 109095 Mm.431589 NM_175402 ENSMUSG00000074102 Rbm15b 1810017N16Rik RNA binding motif protein 15B protein-coding common_peak1_189_1908_-0.22351928594237_10.7868417444328_4.87337526794961 chr14 56811884 56812931 + 4.87337526794961 NA promoter-TSS (NM_001253752) promoter-TSS (NM_001253752) -691 NM_144842 219105 Mm.473172 NM_144842 ENSMUSG00000040123 Zmym5 9830124H08Rik zinc finger, MYM-type 5 protein-coding common_peak2_74_385_0.437692671021587_8.81130337277887_4.87307973977068 chr9 48834849 48836925 + 4.87307973977068 NA promoter-TSS (NM_001033324) promoter-TSS (NM_001033324) 58 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding common_peak1_143_1396_-0.263594009977728_10.3163193004206_4.87282071131553 chr13 14062228 14063559 + 4.87282071131553 NA promoter-TSS (NM_194262) promoter-TSS (NM_194262) 508 NM_010282 14593 Mm.148039 NM_010282 ENSMUSG00000021302 Ggps1 1810026C22Rik|9530089B04Rik|AI843169|C79210 geranylgeranyl diphosphate synthase 1 protein-coding common_peak2_104_983_-0.316934274662421_9.78404736800803_4.87213423591312 chr7 46057266 46059879 + 4.87213423591312 NA intron (NM_153057, intron 15 of 30) intron (NM_153057, intron 15 of 30) 24876 NM_153057 211548 Mm.274811 NM_153057 ENSMUSG00000030835 Nomo1 D7Ertd156e|Nomo|pM5 nodal modulator 1 protein-coding common_peak1_79_731_-0.371340988280554_9.33002934414377_4.87148799955325 chr12 84205691 84206885 + 4.87148799955325 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) -12273 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak1_30_101_0.794256862762811_7.0695537733529_4.87064242311222 chr17 51811236 51811828 + 4.87064242311222 NA intron (NM_001163632, intron 1 of 10) intron (NM_001163632, intron 1 of 10) 522 NM_001163630 20230 Mm.311655 NM_009122 ENSMUSG00000023927 Satb1 2610306G12Rik|AW413156 special AT-rich sequence binding protein 1 protein-coding common_peak1_174_1738_-0.234490915904733_10.6467967593542_4.87042863597924 chr5 105139643 105141609 + 4.87042863597924 NA Intergenic RLTR49|LTR|ERVK -1040 NM_001256005 17472 Mm.440525 NM_008620 ENSMUSG00000079363 Gbp4 AW228052|Mag-2|Mpa-2|Mpa2 guanylate binding protein 4 protein-coding common_peak1_44_181_0.618383997365935_7.81698663888166_4.86962019222735-2 chr4 138463246 138463980 + 4.86962019222735 NA Intergenic Intergenic 8465 NM_025451 66259 Mm.41603 NM_025451 ENSMUSG00000046447 Camk2n1 1810006K23Rik|AI848599|AI891706 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding common_peak1_44_181_0.618383997365935_7.81698663888166_4.86962019222735 chr17 12119280 12119916 + 4.86962019222735 NA intron (NM_026644, intron 1 of 8) intron (NM_026644, intron 1 of 8) 314 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein-coding common_peak2_44_181_0.618383997365935_7.81698663888166_4.86962019222735 chr3 34080905 34081890 + 4.86962019222735 NA promoter-TSS (NM_001026211) promoter-TSS (NM_001026211) -43 NM_026332 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding unique_peak2_11_114_-1.05832689403864_6.31632660392506_4.86934715770728 chr2 32498835 32499713 + 4.86934715770728 NA Intergenic B1_Mus2|SINE|Alu -36085 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak1_11_114_-1.05832689403864_6.31632660392506_4.86934715770728 chr19 45579288 45579607 + 4.86934715770728 NA intron (NM_013907, intron 7 of 8) intron (NM_013907, intron 7 of 8) 18832 NM_172639 226162 Mm.21978 NM_172639 ENSMUSG00000041035 Dpcd 5330431N19Rik|Ndac deleted in primary ciliary dyskinesia protein-coding common_peak1_40_157_0.657662516888323_7.63261200662126_4.86752145798753 chr1 134066781 134067731 + 4.86752145798753 NA Intergenic Intergenic 11899 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_40_157_0.657662516888323_7.63261200662126_4.86752145798753-2 chr10 39387922 39388841 + 4.86752145798753 NA intron (NM_008054, intron 1 of 13) intron (NM_008054, intron 1 of 13) 18582 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_40_157_0.657662516888323_7.63261200662126_4.86752145798753-3 chr8 114133352 114134041 + 4.86752145798753 NA exon (NM_001290182, exon 1 of 3) exon (NM_001290182, exon 1 of 3) 122 NM_024437 67528 Mm.27889 NM_024437 ENSMUSG00000031767 Nudt7 1300007B24Rik|2210404C19Rik nudix (nucleoside diphosphate linked moiety X)-type motif 7 protein-coding common_peak1_30_274_-0.636605603677715_7.78498500657316_4.86686001198532 chr10 56228642 56229183 + 4.86686001198532 NA promoter-TSS (NM_001033385) promoter-TSS (NM_001033385) -223 NM_001033385 544696 Mm.411188 NM_001033385 ENSMUSG00000038122 Tbc1d32 Bromi|D630037F22Rik|b2b2284Clo TBC1 domain family, member 32 protein-coding unique_peak2_30_274_-0.636605603677715_7.78498500657316_4.86686001198532 chr5 134571390 134572724 + 4.86686001198532 NA promoter-TSS (NR_106087) promoter-TSS (NR_106087) -19 NR_106087 102465708 NR_106087 ENSMUSG00000106323 Mir7228 mmu-mir-7228 microRNA 7228 ncRNA unique_peak2_40_362_-0.542382472930325_8.23263450153059_4.8653178479999 chr8 123116413 123118195 + 4.8653178479999 NA promoter-TSS (NM_170684) promoter-TSS (NM_170684) -70 NM_170684 102278 Mm.36434 NM_170684 ENSMUSG00000034796 Cpne7 AW047065 copine VII protein-coding common_peak2_94_538_0.374328327522706_9.26130562651386_4.86422634553541 chr17 56666906 56669213 + 4.86422634553541 NA Intergenic ORR1C1|LTR|ERVL-MaLR -5166 NM_001252466 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding common_peak2_46_194_0.595800773676407_7.90523070058781_4.86369608392245 chr7 36151073 36152448 + 4.86369608392245 NA Intergenic Intergenic -348771 NM_177739 668501 Mm.286296 NM_177739 ENSMUSG00000044452 Zfp507 1810022O10Rik|A230056M16Rik|AL024009|AU021817|BB105092|Gm480|Znf507|mKIAA1084 zinc finger protein 507 protein-coding common_peak2_107_1014_-0.311831822860231_9.83134810064242_4.86321100658417 chr18 69592111 69594956 + 4.86321100658417 NA intron (NM_001083967, intron 8 of 19) intron (NM_001083967, intron 8 of 19) 247812 NM_001083967 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak2_75_691_-0.381039401867122_9.24410852670317_4.86319250909341 chr4 155846738 155848333 + 4.86319250909341 NA 5' UTR (NM_010091, exon 1 of 15) 5' UTR (NM_010091, exon 1 of 15) 218 NM_010091 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding common_peak1_108_651_0.343014081298559_9.52023519488036_4.86283000596044 chr2 50296095 50296947 + 4.86283000596044 NA promoter-TSS (NR_040361) promoter-TSS (NR_040361) 156 NM_133839 109129 Mm.29214 NM_133839 ENSMUSG00000026766 Mmadhc 2010311D03Rik|AI314967|CblD methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria protein-coding common_peak2_513_5070_0.128159401276397_12.3721342597048_4.86123487194517 chr5 142902094 142910700 + 4.86123487194517 NA intron (NM_007393, intron 1 of 5) CpG 357 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak2_137_900_0.293824335619613_9.96229546362335_4.86042121350277 chr16 17199830 17201890 + 4.86042121350277 NA intron (NM_009456, intron 1 of 3) intron (NM_009456, intron 1 of 3) 632 NM_009456 22195 Mm.3074 NM_009456 ENSMUSG00000038965 Ube2l3 C79827|UbcM4|Ubce7 ubiquitin-conjugating enzyme E2L 3 protein-coding common_peak1_63_575_-0.420447115944432_8.9597014434701_4.85973016843471 chr4 43039518 43040323 + 4.85973016843471 NA intron (NM_001253354, intron 1 of 9) intron (NM_001253354, intron 1 of 9) 381 NM_001253353 230088 Mm.260162 NM_172691 ENSMUSG00000036002 Fam214b B230312A22Rik family with sequence similarity 214, member B protein-coding common_peak1_63_306_0.487383040127702_8.50578636543403_4.85922785454041 chr17 50580049 50581151 + 4.85922785454041 NA intron (NM_013880, intron 1 of 5) intron (NM_013880, intron 1 of 5) 71053 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak2_95_891_-0.333899809455497_9.63394999519256_4.858880273353 chr12 69384995 69387623 + 4.858880273353 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 14159 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak2_152_1035_0.274997005594185_10.1543067904836_4.85784343852803 chr16 4585604 4587980 + 4.85784343852803 NA Intergenic CpG -7921 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding common_peak2_259_2730_-0.185074456059677_11.3226763707354_4.85627151990744 chr17 33918433 33921390 + 4.85627151990744 NA TTS (NM_020625) TTS (NM_020625) 433 NM_009318 21356 Mm.154457 NM_009318 ENSMUSG00000024308 Tapbp D17Wsu91e|TPN TAP binding protein protein-coding common_peak1_81_750_-0.364613521262489_9.37036233688303_4.85614001535663 chr9 48816401 48817466 + 4.85614001535663 NA intron (NM_001033324, intron 2 of 6) MIR3|SINE|MIR 19012 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding common_peak1_111_676_0.336777348815641_9.57140069798282_4.85593094731428 chr11 23894238 23895475 + 4.85593094731428 NA intron (NM_172555, intron 1 of 21) CpG 414 NM_172555 216578 Mm.470599 NM_172555 ENSMUSG00000020273 Papolg 9630006B20Rik poly(A) polymerase gamma protein-coding common_peak1_296_2494_0.180764879742824_11.375206540096_4.85570948773841 chr1 59912405 59914237 + 4.85570948773841 NA exon (NM_001037725, exon 1 of 8) exon (NM_001037725, exon 1 of 8) 315 NM_001037725 72750 Mm.258250 NM_001037725 ENSMUSG00000041040 Fam117b 2810425F24Rik|6330416D14Rik|Als2cr13 family with sequence similarity 117, member B protein-coding common_peak2_162_1127_0.264293091522577_10.2716978981601_4.85546670990428 chr8 123253325 123255306 + 4.85546670990428 NA promoter-TSS (NM_028200) promoter-TSS (NM_028200) -93 NM_028200 72325 Mm.276193 NM_028200 ENSMUSG00000001062 Vps9d1 1300018I17Rik|2410004N05Rik|5DOS1|Vsp9d1 VPS9 domain containing 1 protein-coding common_peak2_238_1875_0.207660401577202_10.977274313304_4.8553906132058 chr12 3234894 3239176 + 4.8553906132058 NA intron (NR_015551, intron 1 of 6) intron (NR_015551, intron 1 of 6) 1244 NR_015551 74173 Mm.309774 NM_028796 ENSMUSG00000079179 Rab10os 1700012B15Rik|1810036A22Rik RAB10, member RAS oncogene family, opposite strand ncRNA common_peak2_151_1483_-0.255074239664845_10.4077382567884_4.85533714097674 chr4 135166162 135169327 + 4.85533714097674 NA intron (NM_019732, intron 4 of 5) intron (NM_019732, intron 4 of 5) 47099 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_81_437_0.413268516650609_8.98142131792648_4.85460575634834 chr14 61599014 61600239 + 4.85460575634834 NA intron (NM_023233, intron 1 of 2) CpG 114 NM_023233 66597 Mm.491258 NM_023233 ENSMUSG00000035235 Trim13 3110001L12Rik|CAR|LEU5|RNF77|Rfp2 tripartite motif-containing 13 protein-coding common_peak2_71_363_0.450115344046683_8.73285231222204_4.8533882857944 chr19 33222329 33224075 + 4.8533882857944 NA intron (NM_001167818, intron 4 of 6) intron (NM_001167818, intron 4 of 6) 169093 NM_001167818 67795 Mm.204591 NM_001146342 ENSMUSG00000071573 Rnls 6530404N21Rik|AI452315|AW060440|C10orf59 renalase, FAD-dependent amine oxidase protein-coding common_peak2_88_820_-0.348220043013617_9.507128390271_4.85122836675387 chr5 72756610 72759906 + 4.85122836675387 NA intron (NM_013689, intron 15 of 17) intron (NM_013689, intron 15 of 17) -5481 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_161_1118_0.264960073202841_10.2604743575778_4.85047176087549 chr17 28800319 28801640 + 4.85047176087549 NA promoter-TSS (NM_001081315) promoter-TSS (NM_001081315) -147 NM_001081315 268936 Mm.291877 NM_199061 ENSMUSG00000063952 Brpf3 AI413466|AW493400|mKIAA1286 bromodomain and PHD finger containing, 3 protein-coding common_peak2_148_1449_-0.256912182794675_10.373381093505_4.85028832096514 chr10 30617462 30619292 + 4.85028832096514 NA promoter-TSS (NM_025798) promoter-TSS (NM_025798) -11 NM_025798 66847 Mm.46218 NM_025798 ENSMUSG00000019791 Hint3 0610010I17Rik|AV009015|HINT-3|HINT-4|HINT4 histidine triad nucleotide binding protein 3 protein-coding common_peak1_76_701_-0.378605679531494_9.26602438053881_4.84943467377155 chr7 102064826 102065990 + 4.84943467377155 NA promoter-TSS (NM_029211) promoter-TSS (NM_029211) -83 NR_104582 102443351 Mm.292904 NM_011644 ENSMUSG00000070425 Xntrpc Xndr-trpc2 Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough protein-coding common_peak2_160_1108_0.266953263197269_10.2485202817603_4.84930981747893 chr12 104751119 104753012 + 4.84930981747893 NA promoter-TSS (NM_148948) promoter-TSS (NM_148948) -113 NM_148948 192119 Mm.21135 NM_148948 ENSMUSG00000041415 Dicer1 1110006F08Rik|D12Ertd7e|mKIAA0928 dicer 1, ribonuclease type III protein-coding common_peak1_97_562_0.366497436016811_9.32023983008864_4.84782881430611 chr8 106168245 106169483 + 4.84782881430611 NA promoter-TSS (NM_178798) promoter-TSS (NM_178798) -11 NM_178798 330836 Mm.46749 NM_178798 ENSMUSG00000031904 Slc7a6 AI643885|LAT-2|LAT3 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 protein-coding common_peak2_129_830_0.304822164748908_9.8511157491448_4.84768894545034 chr17 21212924 21216721 + 4.84768894545034 NA Intergenic Intergenic -14004 NM_134198 171232 Mm.377189 NM_134198 ENSMUSG00000057203 Vmn1r234 V1rf1 vomeronasal 1 receptor 234 protein-coding common_peak2_82_760_-0.362246774335198_9.39062925633595_4.84587759594249 chr4 135176933 135180203 + 4.84587759594249 NA TTS (NM_019732) TTS (NM_019732) 57923 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_168_1670_-0.238682169531778_10.5871549332953_4.8458557301621 chr8 94837536 94839554 + 4.8458557301621 NA promoter-TSS (NM_134141) promoter-TSS (NM_134141) 128 NM_026452 67914 Mm.169234 NM_026452 ENSMUSG00000031782 Coq9 2310005O14Rik|C78387 coenzyme Q9 protein-coding common_peak1_117_727_0.324344076029485_9.66996667821344_4.84509723691639 chr2 126932453 126933597 + 4.84509723691639 NA 5' UTR (NM_023220, exon 1 of 15) 5' UTR (NM_023220, exon 1 of 15) 210 NM_023220 66552 Mm.269928 NM_023220 ENSMUSG00000027366 Sppl2a 2010106G01Rik|C130089K23Rik signal peptide peptidase like 2A protein-coding common_peak1_29_265_-0.646626002903486_7.73196943404945_4.84272456178921 chr3 105891443 105891932 + 4.84272456178921 NA intron (NM_027025, intron 1 of 6) intron (NM_027025, intron 1 of 6) -12734 NM_009631 11542 Mm.235024 NM_009631 ENSMUSG00000000562 Adora3 A3AR|A3R|AA3R|ARA3|Gpcr2 adenosine A3 receptor protein-coding common_peak1_60_286_0.499612524371285_8.41471318886133_4.84262473830983 chr12 17266589 17267643 + 4.84262473830983 NA intron (NM_027959, intron 1 of 12) intron (NM_027959, intron 1 of 12) 521 NM_027959 71853 Mm.222825 NM_027959 ENSMUSG00000020571 Pdia6 1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7 protein disulfide isomerase associated 6 protein-coding common_peak1_158_1090_0.268440895272791_10.22565583396_4.83988238416948 chr6 90756060 90757926 + 4.83988238416948 NA intron (NM_001134384, intron 1 of 13) intron (NM_001134384, intron 1 of 13) -40464 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_25_231_-0.70255975048664_7.50670111988425_4.83968986360235-2 chr13 32338794 32339269 + 4.83968986360235 NA promoter-TSS (NM_146041) promoter-TSS (NM_146041) -487 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_25_231_-0.70255975048664_7.50670111988425_4.83968986360235 chr1 34480769 34481407 + 4.83968986360235 NA Intergenic Intergenic -17342 NM_009355 21755 Mm.10725 NM_009355 ENSMUSG00000026125 Prss39 Tesp1 protease, serine 39 protein-coding common_peak1_25_231_-0.70255975048664_7.50670111988425_4.83968986360235-3 chr2 6703517 6704051 + 4.83968986360235 NA intron (NM_001310447, intron 1 of 11) PB1D9|SINE|Alu 17878 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_25_231_-0.70255975048664_7.50670111988425_4.83968986360235-4 chr5 20952393 20953090 + 4.83968986360235 NA promoter-TSS (NM_001080977) promoter-TSS (NM_001080977) -919 NM_001080977 242860 Mm.254286 NM_001080977 ENSMUSG00000039968 Rsbn1l 8430412F05Rik|AI447441|C330002G24Rik round spermatid basic protein 1-like protein-coding common_peak2_145_1417_-0.26071047966753_10.3392865774058_4.83948608295671 chr11 51872130 51876363 + 4.83948608295671 NA Intergenic Intergenic -16765 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak1_49_213_0.571160516921594_8.02704724486194_4.83944668647873 chr10 40451406 40452504 + 4.83944668647873 NA intron (NM_001291817, intron 4 of 11) intron (NM_001291817, intron 4 of 11) 102647 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak2_49_213_0.571160516921594_8.02704724486194_4.83944668647873 chr13 109821448 109822573 + 4.83944668647873 NA intron (NM_011056, intron 7 of 16) intron (NM_011056, intron 7 of 16) -81799 NR_035442 100316683 NR_035442 ENSMUSG00000084651 Mir1904 Mirn1904|mmu-mir-1904 microRNA 1904 ncRNA common_peak1_49_213_0.571160516921594_8.02704724486194_4.83944668647873-2 chr5 135912713 135913679 + 4.83944668647873 NA intron (NM_018871, intron 1 of 1) B1_Mus1|SINE|Alu 21445 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak1_32_291_-0.612504611219138_7.88357225327045_4.83904841379253 chr11 115159389 115160023 + 4.83904841379253 NA exon (NM_021411, exon 6 of 9) exon (NM_021411, exon 6 of 9) -3635 NM_012030 26941 Mm.27842 NM_012030 ENSMUSG00000020733 Slc9a3r1 EBP-50|NHE-RF|NHERF-1|NHERF1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 protein-coding common_peak1_32_291_-0.612504611219138_7.88357225327045_4.83904841379253-2 chr5 34369056 34369761 + 4.83904841379253 NA promoter-TSS (NM_001243123) promoter-TSS (NM_001243123) -525 NM_001243123 231128 Mm.286885 NM_001030306 ENSMUSG00000037210 Fam193a - family with sequence similarity 193, member A protein-coding common_peak1_146_981_0.281431538749276_10.0802949836893_4.83783968863591 chr2 37422175 37423687 + 4.83783968863591 NA promoter-TSS (NM_001100591) promoter-TSS (NM_001100591) -28 NM_001290642 319817 Mm.288785 NM_001100591 ENSMUSG00000075376 Rc3h2 2900024N03Rik|9430019J22Rik|D930043C02Rik|Mnab|Rnf164 ring finger and CCCH-type zinc finger domains 2 protein-coding common_peak2_90_840_-0.343616947535097_9.5441535164876_4.83783528085008-2 chr19 5647851 5650072 + 4.83783528085008 NA TTS (NM_009045) TTS (NM_009045) 11471 NM_009045 19697 Mm.249966 NM_009045 ENSMUSG00000024927 Rela p65 v-rel reticuloendotheliosis viral oncogene homolog A (avian) protein-coding common_peak2_90_840_-0.343616947535097_9.5441535164876_4.83783528085008 chr11 34033258 34035513 + 4.83783528085008 NA Intergenic L2|LINE|L2 -12816 NM_010696 16822 Mm.265350 NM_010696 ENSMUSG00000002699 Lcp2 AI323664|BB161688|SLP-76|SLP76|m1Khoe|twm lymphocyte cytosolic protein 2 protein-coding unique_peak2_14_139_-0.947238895533618_6.65566356917816_4.8378125836452-3 chr6 86660322 86661137 + 4.8378125836452 NA intron (NM_010751, intron 3 of 5) intron (NM_010751, intron 3 of 5) 8430 NM_010751 17119 Mm.279580 NM_010751 ENSMUSG00000001156 Mxd1 AW122478|Mad|Mad1 MAX dimerization protein 1 protein-coding unique_peak2_14_139_-0.947238895533618_6.65566356917816_4.8378125836452-2 chr2 52522778 52524088 + 4.8378125836452 NA intron (NM_001285426, intron 2 of 13) MLT1B|LTR|ERVL-MaLR 35178 NM_146123 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding unique_peak2_14_139_-0.947238895533618_6.65566356917816_4.8378125836452 chr17 6492601 6493204 + 4.8378125836452 NA Intergenic Intergenic -41908 NR_033520 547127 Mm.297552 NM_001045538 Tmem181b-ps Tmem181b transmembrane protein 181B, pseudogene pseudo unique_peak2_14_139_-0.947238895533618_6.65566356917816_4.8378125836452-4 chr8 25090272 25091460 + 4.8378125836452 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 10945 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_144_1406_-0.261637711845644_10.3275877573137_4.83728407924551 chrX 7898105 7900193 + 4.83728407924551 NA promoter-TSS (NM_011591) promoter-TSS (NM_011591) 120 NM_001252529 54633 Mm.14616 NM_019478 ENSMUSG00000031157 Pqbp1 PQBP-1|Sfc2|npw38 polyglutamine binding protein 1 protein-coding common_peak1_64_585_-0.417842334089352_8.98583568737757_4.83669600078029 chr3 104779722 104780617 + 4.83669600078029 NA promoter-TSS (NM_027982) promoter-TSS (NM_027982) -887 NM_027982 71887 Mm.379204 NM_027982 ENSMUSG00000002228 Ppm1j 2310008J22Rik|PP2Czeta|Ppp2cz protein phosphatase 1J protein-coding common_peak2_156_1537_-0.249364153556177_10.4621577111837_4.83586546938596 chr2 132510349 132513691 + 4.83586546938596 NA intron (NR_028286, intron 1 of 3) L1M3|LINE|L1 21292 NR_028286 70371 Mm.394667 NR_028286 ENSMUSG00000086379 1700026D11Rik - RIKEN cDNA 1700026D11 gene ncRNA common_peak1_303_3269_-0.168261472243129_11.5909441842639_4.83281829873946 chr2 119476655 119478841 + 4.83281829873946 NA promoter-TSS (NM_026574) promoter-TSS (NM_026574) -119 NM_026574 68142 Mm.330496 NM_026574 ENSMUSG00000034154 Ino80 2310079N15Rik|4632409L19Rik|Inoc1 INO80 complex subunit protein-coding common_peak2_72_371_0.443160215277597_8.76073891874683_4.83157479907819 chr5 76529069 76530122 + 4.83157479907819 NA intron (NM_001289770, intron 1 of 18) CpG 284 NM_001289770 69940 Mm.403233 NM_027270 ENSMUSG00000036435 Exoc1 2810407P21Rik|A730011E05Rik|SEC3|Sec3l1|Sec3p exocyst complex component 1 protein-coding common_peak2_72_371_0.443160215277597_8.76073891874683_4.83157479907819-2 chr8 11476911 11478779 + 4.83157479907819 NA promoter-TSS (NR_126558) promoter-TSS (NR_126558) -84 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak1_72_371_0.443160215277597_8.76073891874683_4.83157479907819 chr4 128805136 128806370 + 4.83157479907819 NA intron (NM_001081098, intron 1 of 8) intron (NM_001081098, intron 1 of 8) 359 NM_001081098 230761 Mm.22616 NM_001081098 ENSMUSG00000028799 Zfp362 - zinc finger protein 362 protein-coding common_peak1_24_222_-0.714884707783921_7.44345754602834_4.8312967712535-2 chr8 25598376 25598976 + 4.8312967712535 NA Intergenic Intergenic -1189 NM_173012 270035 Mm.268349 NM_173012 ENSMUSG00000037363 Letm2 6030453H13|D030041N04Rik leucine zipper-EF-hand containing transmembrane protein 2 protein-coding common_peak1_24_222_-0.714884707783921_7.44345754602834_4.8312967712535 chr12 110696587 110697099 + 4.8312967712535 NA promoter-TSS (NM_010480) promoter-TSS (NM_010480) -448 NM_010480 15519 Mm.1843 NM_010480 ENSMUSG00000021270 Hsp90aa1 86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4 heat shock protein 90, alpha (cytosolic), class A member 1 protein-coding common_peak1_24_222_-0.714884707783921_7.44345754602834_4.8312967712535-3 chr9 124145947 124146488 + 4.8312967712535 NA Intergenic RMER15|LTR|ERVL 24674 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak1_73_671_-0.385921460380994_9.19935669258826_4.83118389429209 chr7 4340355 4341832 + 4.83118389429209 NA intron (NM_010746, intron 4 of 6) intron (NM_010746, intron 4 of 6) 3369 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak2_52_232_0.551555620788832_8.1399639550487_4.83107485494123 chr13 43208522 43210161 + 4.83107485494123 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -37840 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak2_29_96_0.808743590410575_7.00428463739242_4.83084850452433 chr1 153332310 153333059 + 4.83084850452433 NA 5' UTR (NM_010683, exon 1 of 28) 5' UTR (NM_010683, exon 1 of 28) 102 NM_010683 226519 Mm.1249 NM_010683 ENSMUSG00000026478 Lamc1 Lamb2 laminin, gamma 1 protein-coding common_peak1_29_96_0.808743590410575_7.00428463739242_4.83084850452433 chr4 137862182 137862763 + 4.83084850452433 NA intron (NM_199307, intron 1 of 19) CpG 235 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding common_peak1_77_408_0.423598727852468_8.88775639686798_4.8285750374259-2 chr7 89940487 89941287 + 4.8285750374259 NA non-coding (NR_111916, exon 1 of 1) non-coding (NR_111916, exon 1 of 1) 317 NM_001291289 67669 Mm.28679 NM_026304 ENSMUSG00000062797 Hikeshi 0610007P06Rik|1110002N09Rik|l(7)6Rn|l7Rn6 heat shock protein nuclear import factor protein-coding common_peak1_77_408_0.423598727852468_8.88775639686798_4.8285750374259 chr3 93552035 93553388 + 4.8285750374259 NA Intergenic Intergenic -2406 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak2_139_1351_-0.266209099385938_10.2677748865892_4.82835152649117 chr4 123570643 123572274 + 4.82835152649117 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -44962 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA unique_peak2_23_213_-0.727691518309052_7.37762122724662_4.8272884026017 chr19 9029374 9030721 + 4.8272884026017 NA intron (NR_104460, intron 4 of 6) L2c|LINE|L2 12143 NR_105786 102465190 NR_105786 ENSMUSG00000099308 Mir6367 Gm27467|mmu-mir-6367 microRNA 6367 ncRNA unique_peak2_23_213_-0.727691518309052_7.37762122724662_4.8272884026017-2 chr4 128711383 128712411 + 4.8272884026017 NA intron (NM_018774, intron 6 of 14) CT-rich|Low_complexity|Low_complexity -15674 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic-like 2 (Drosophila) protein-coding common_peak1_23_213_-0.727691518309052_7.37762122724662_4.8272884026017 chr6 48723532 48724079 + 4.8272884026017 NA exon (NM_146167, exon 2 of 2) exon (NM_146167, exon 2 of 2) 5184 NM_146167 231932 Mm.30479 NM_146167 ENSMUSG00000043931 Gimap7 IAN7|Ian3 GTPase, IMAP family member 7 protein-coding common_peak2_84_780_-0.357536890289488_9.43041029299724_4.8271410705488-2 chr7 127392809 127394385 + 4.8271410705488 NA promoter-TSS (NM_198011) promoter-TSS (NM_198011) 24 NM_198011 101604 Mm.334241 NM_198011 ENSMUSG00000078580 E430018J23Rik AI480612 RIKEN cDNA E430018J23 gene protein-coding common_peak2_84_780_-0.357536890289488_9.43041029299724_4.8271410705488 chr3 94850989 94853608 + 4.8271410705488 NA intron (NM_001165948, intron 1 of 18) intron (NM_001165948, intron 1 of 18) 14731 NM_172683 229584 Mm.274787 NM_172683 ENSMUSG00000038902 Pogz 9530006B08Rik pogo transposable element with ZNF domain protein-coding common_peak1_32_112_0.757140985245692_7.19874945503803_4.82579392902816 chr10 13498930 13499535 + 4.82579392902816 NA Intergenic MTEb|LTR|ERVL-MaLR -1796 NM_025799 66848 Mm.26625 NM_025799 ENSMUSG00000019810 Fuca2 0610025O11Rik|5530401P20Rik fucosidase, alpha-L- 2, plasma protein-coding common_peak2_153_1504_-0.252213919687643_10.4294408118032_4.82537973812335 chr7 101895708 101897722 + 4.82537973812335 NA intron (NM_001291349, intron 1 of 4) intron (NM_001291349, intron 1 of 4) 384 NM_001291349 75430 Mm.284491 NM_027532 ENSMUSG00000030649 Anapc15 3200002M19Rik|6330414C15Rik|APC15 anaphase prompoting complex C subunit 15 protein-coding common_peak1_164_1146_0.261775858523377_10.2945376052775_4.82428689842805 chr7 15921829 15923180 + 4.82428689842805 NA promoter-TSS (NM_009156) promoter-TSS (NM_009156) -133 NM_009156 20364 Mm.42829 NM_009156 ENSMUSG00000041571 Selenow Sepw1|selW selenoprotein W protein-coding common_peak1_25_76_0.888634703946031_6.71110389266792_4.82422426693383 chr11 51264840 51265474 + 4.82422426693383 NA intron (NM_001304744, intron 1 of 10) intron (NM_001304744, intron 1 of 10) 2043 NM_007714 12750 Mm.239354 NM_007714 ENSMUSG00000020385 Clk4 AI987988|C85119 CDC like kinase 4 protein-coding common_peak1_39_353_-0.549859011265864_8.19267604445006_4.82407237641157 chr10 127676250 127676988 + 4.82407237641157 NA promoter-TSS (NM_001113211) promoter-TSS (NM_001113211) -446 NM_173732 210035 Mm.251075 NM_173732 ENSMUSG00000040195 Nemp1 Tmem194|Tmem194a nuclear envelope integral membrane protein 1 protein-coding common_peak1_37_140_0.687425162184453_7.48326393349102_4.82238740162048 chr16 32741638 32742411 + 4.82238740162048 NA intron (NM_080457, intron 1 of 26) intron (NM_080457, intron 1 of 26) 6138 NM_080457 140474 Mm.214599 NM_080457 ENSMUSG00000079620 Muc4 4933405I11Rik|Asgp mucin 4 protein-coding unique_peak2_34_308_-0.590017313380841_7.97645437121395_4.82237166749103 chr19 10602317 10603620 + 4.82237166749103 NA intron (NM_145496, intron 1 of 16) intron (NM_145496, intron 1 of 16) 1290 NM_145496 225913 Mm.374868 NM_145496 ENSMUSG00000034371 Tkfc BC021917|Dak triokinase, FMN cyclase protein-coding common_peak1_43_389_-0.520920259869303_8.34687018381496_4.8218292225498 chr4 129461529 129462109 + 4.8218292225498 NA intron (NM_133889, intron 1 of 10) CpG 140 NM_133889 100383 Mm.17918 NM_133889 ENSMUSG00000040859 Bsdc1 1110063F24Rik|AW011758 BSD domain containing 1 protein-coding common_peak2_162_1603_-0.243613982533549_10.5256514351881_4.82135265667593 chrX 12760609 12763374 + 4.82135265667593 NA promoter-TSS (NM_012005) promoter-TSS (NM_012005) -18 NM_001048208 26896 Mm.17616 NM_012005 ENSMUSG00000064127 Med14 9930001L01Rik|AU041628|Crsp2|ENSMUSG00000073278|Gm641|ORF1|Trap170 mediator complex subunit 14 protein-coding common_peak1_162_1603_-0.243613982533549_10.5256514351881_4.82135265667593 chr9 21129885 21131526 + 4.82135265667593 NA intron (NM_001205312, intron 1 of 24) B1F|SINE|Alu 570 NM_018793 54721 Mm.20249 NM_018793 ENSMUSG00000032175 Tyk2 JTK1 tyrosine kinase 2 protein-coding common_peak1_55_252_0.530183486509971_8.2480853179493_4.82042291539259 chr8 126666286 126667387 + 4.82042291539259 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -73400 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_50_453_-0.478877710163458_8.58710963220918_4.81714022493871 chr11 49204246 49204970 + 4.81714022493871 NA intron (NM_009562, intron 1 of 3) intron (NM_009562, intron 1 of 3) 1108 NM_009562 22720 Mm.16650 NM_009562 ENSMUSG00000046311 Zfp62 - zinc finger protein 62 protein-coding common_peak2_74_681_-0.383478220734506_9.22188881865692_4.81642101143419 chr5 136135313 136137245 + 4.81642101143419 NA promoter-TSS (NM_027891) promoter-TSS (NM_027891) -205 NM_027891 71735 Mm.425292 NM_027891 ENSMUSG00000029703 Lrwd1 1200011O22Rik|AU042569|AW548074|Orca leucine-rich repeats and WD repeat domain containing 1 protein-coding common_peak1_53_480_-0.461073205744091_8.679356480898_4.81505852396329-2 chr9 56041838 56042534 + 4.81505852396329 NA exon (NM_011992, exon 1 of 7) exon (NM_011992, exon 1 of 7) 341 NM_011992 26611 Mm.1782 NM_011992 ENSMUSG00000032320 Rcn2 AA408742|Tcbp49 reticulocalbin 2 protein-coding common_peak1_53_480_-0.461073205744091_8.679356480898_4.81505852396329 chr3 69202150 69203280 + 4.81505852396329 NA Intergenic B1_Mus1|SINE|Alu -19704 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding common_peak1_85_468_0.398895368924929_9.07289179697784_4.81435190575443 chr8 120764371 120765568 + 4.81435190575443 NA Intergenic Intergenic 26330 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_110_1044_-0.305369059603549_9.87660269716647_4.81355965172779 chr6 127453102 127454559 + 4.81355965172779 NA intron (NM_181402, intron 1 of 8) CpG 107 NM_181402 101187 Mm.110818 NM_181402 ENSMUSG00000037997 Parp11 5330431N24Rik|AI851877|ARTD11|HIN1L|PARP-11 poly (ADP-ribose) polymerase family, member 11 protein-coding common_peak1_15_147_-0.913200102503782_6.75285331437706_4.81349018833781 chr11 79041712 79042162 + 4.81349018833781 NA intron (NM_013571, intron 4 of 17) intron (NM_013571, intron 4 of 17) 18340 NR_045873 790910 Mm.440410 NR_045873 Gm11201 ENSMUSG00000072637|OTTMUSG00000000169 predicted gene 11201 ncRNA common_peak2_136_892_0.293821191413636_9.94942696082804_4.81238003416369 chr4 108300211 108302027 + 4.81238003416369 NA promoter-TSS (NM_001033634) promoter-TSS (NM_001033634) -29 NM_001033634 414872 Mm.426241 NM_001033634 ENSMUSG00000034636 Zyg11b 1110046I03Rik|2810482G21Rik|D4Mgi23|Gm431|mKIAA1730 zyg-ll family member B, cell cycle regulator protein-coding unique_peak1_14_28_1.32406312628378_5.52001255826946_4.81159447205458 chr12 84179090 84179430 + 4.81159447205458 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 14755 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak1_14_28_1.32406312628378_5.52001255826946_4.81159447205458 chr10 24713006 24713314 + 4.81159447205458 NA Intergenic B4|SINE|B4 -1001 NM_008813 18605 Mm.27254 NM_008813 ENSMUSG00000037370 Enpp1 4833416E15Rik|AI428932|C76301|CD203c|E-NPP 1|E-NPP1|Ly-41|M6S1|NPP1|Npps|PC-1|Pca|Pca-1|Pdnp1|ttw|twy ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding common_peak1_14_28_1.32406312628378_5.52001255826946_4.81159447205458-2 chr15 80233019 80233338 + 4.81159447205458 NA promoter-TSS (NM_178719) promoter-TSS (NM_178719) -902 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak1_14_28_1.32406312628378_5.52001255826946_4.81159447205458-4 chr4 136051839 136052219 + 4.81159447205458 NA intron (NM_025919, intron 2 of 5) intron (NM_025919, intron 2 of 5) 1342 NM_025919 67025 Mm.276856 NM_025919 ENSMUSG00000059291 Rpl11 2010203J19Rik ribosomal protein L11 protein-coding common_peak1_14_28_1.32406312628378_5.52001255826946_4.81159447205458-3 chr3 87907739 87908102 + 4.81159447205458 NA intron (NM_008231, intron 1 of 5) intron (NM_008231, intron 1 of 5) 1599 NM_008231 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding unique_peak1_14_28_1.32406312628378_5.52001255826946_4.81159447205458-2 chr5 148386327 148386667 + 4.81159447205458 NA intron (NM_007513, intron 1 of 12) intron (NM_007513, intron 1 of 12) 6318 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_127_1222_-0.280118491843151_10.1161494426058_4.81123815350743 chr3 88409545 88410961 + 4.81123815350743 NA TTS (NM_001281795) TTS (NM_001281795) 144 NM_001310605 67037 Mm.36715 NM_025928 ENSMUSG00000028066 Pmf1 2600009M07Rik|AL033286|AW060657 polyamine-modulated factor 1 protein-coding common_peak2_151_1027_0.274576587762079_10.1429128430749_4.81043707132178 chr13 95615818 95619028 + 4.81043707132178 NA intron (NM_010169, intron 1 of 1) intron (NM_010169, intron 1 of 1) 1010 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding common_peak2_93_531_0.374460963111186_9.24251291705678_4.80989232764988 chr10 13867940 13869858 + 4.80989232764988 NA promoter-TSS (NM_025446) promoter-TSS (NM_025446) -69 NM_025446 66253 Mm.45755 NM_025446 ENSMUSG00000019806 Aig1 1500031O19Rik|AV064870|AW413422|CGI-103 androgen-induced 1 protein-coding common_peak2_124_1190_-0.28383691884941_10.0760392384394_4.80983022031474 chr2 164070009 164071887 + 4.80983022031474 NA exon (NM_001291155, exon 1 of 7) exon (NM_001291155, exon 1 of 7) 154 NM_025996 67145 Mm.23173 NM_025996 ENSMUSG00000018322 Tomm34 2610100K07Rik|TOM34 translocase of outer mitochondrial membrane 34 protein-coding common_peak2_87_809_-0.348755732705325_9.48740023141933_4.8094142180771 chr7 144914377 144915925 + 4.8094142180771 NA promoter-TSS (NM_028184) promoter-TSS (NM_028184) -43 NM_028184 72284 Mm.273049 NM_028184 ENSMUSG00000031072 Oraov1 2210010N10Rik|TAOS1 oral cancer overexpressed 1 protein-coding common_peak1_511_6005_-0.122873940500201_12.490751789307_4.80932502915708 chr5 96160191 96164821 + 4.80932502915708 NA promoter-TSS (NM_178854) promoter-TSS (NM_178854) -516 NM_144910 231464 Mm.28374 NM_144910 ENSMUSG00000034724 Cnot6l 4932442K20Rik CCR4-NOT transcription complex, subunit 6-like protein-coding common_peak2_177_1269_0.249017898291015_10.435121730805_4.80905259611299 chr17 55944215 55946207 + 4.80905259611299 NA promoter-TSS (NM_146249) promoter-TSS (NM_146249) 48 NM_146249 240120 Mm.441018 NM_146249 ENSMUSG00000062101 Zfp119b - zinc finger protein 119b protein-coding unique_peak1_24_71_0.916090190694072_6.62797009678935_4.80901188593007 chr2 28791376 28791959 + 4.80901188593007 NA intron (NM_001033874, intron 11 of 12) intron (NM_001033874, intron 11 of 12) 48693 NM_172977 269252 Mm.26043 NM_172977 ENSMUSG00000035666 Gtf3c4 5330400C03|AI426938|AU014771|AU017413|KAT12|TFIIIC90 general transcription factor IIIC, polypeptide 4 protein-coding common_peak2_80_740_-0.366987649312955_9.34983590764936_4.80859262536258 chr2 158624645 158625910 + 4.80859262536258 NA exon (NM_175419, exon 1 of 9) exon (NM_175419, exon 1 of 9) 364 NM_175419 109275 Mm.27747 NM_175419 ENSMUSG00000037761 Actr5 AA545173|B430109J19Rik ARP5 actin-related protein 5 protein-coding common_peak2_58_273_0.507494322081298_8.35177924400118_4.80804717098021 chr17 10839582 10841055 + 4.80804717098021 NA promoter-TSS (NM_027032) promoter-TSS (NM_027032) -66 NM_016694 50873 Mm.311110 NM_016694 ENSMUSG00000023826 Park2 PRKN Parkinson disease (autosomal recessive, juvenile) 2, parkin protein-coding common_peak2_109_660_0.339396868064579_9.53820489553998_4.80768498708152 chr2 127133121 127134713 + 4.80768498708152 NA promoter-TSS (NM_144818) promoter-TSS (NM_144818) 37 NM_144818 215387 Mm.29786 NM_144818 ENSMUSG00000034906 Ncaph A730011O11Rik|Brrn1|HCAP-H|mKIAA0074 non-SMC condensin I complex, subunit H protein-coding common_peak1_195_1975_-0.218266372301281_10.839234045434_4.80756285253044 chr3 75555972 75557113 + 4.80756285253044 NA promoter-TSS (NM_009250) promoter-TSS (NM_009250) 310 NM_019745 56426 Mm.316473 NM_019745 ENSMUSG00000027835 Pdcd10 2410003B13Rik|Ccm3|Tfa15|Tfar15 programmed cell death 10 protein-coding common_peak2_149_1008_0.278051560369667_10.1177362392912_4.80718234052342 chr4 132921688 132923517 + 4.80718234052342 NA promoter-TSS (NM_001163792) promoter-TSS (NM_001163792) -51 NM_001163792 230789 Mm.11473 NM_145553 ENSMUSG00000028878 Fam76a - family with sequence similarity 76, member A protein-coding common_peak1_123_1180_-0.285886422290138_10.0628500382521_4.80694236986823 chr14 47298250 47299450 + 4.80694236986823 NA intron (NM_178684, intron 1 of 3) intron (NM_178684, intron 1 of 3) 536 NM_178684 218975 Mm.212297 NM_178684 ENSMUSG00000021840 Mapk1ip1l 9130202B12|C130032J12Rik mitogen-activated protein kinase 1 interacting protein 1-like protein-coding common_peak2_117_1117_-0.294565756615009_9.97942159453569_4.80630469287332 chr2 29826001 29828082 + 4.80630469287332 NA promoter-TSS (NM_026615) promoter-TSS (NM_026615) -348 NM_026615 68205 Mm.20273 NM_026615 ENSMUSG00000069020 Urm1 2900073H19Rik ubiquitin related modifier 1 protein-coding common_peak1_21_196_-0.762254076762425_7.24092478107516_4.80547204526377 chr14 121280214 121280747 + 4.80547204526377 NA intron (NM_134082, intron 25 of 26) intron (NM_134082, intron 25 of 26) 98750 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_19_179_-0.800718868698898_7.09149366198023_4.80416691688046 chr15 76606859 76607594 + 4.80416691688046 NA intron (NM_053193, intron 1 of 36) intron (NM_053193, intron 1 of 36) 365 NM_053193 94230 Mm.45141 NM_053193 ENSMUSG00000034022 Cpsf1 - cleavage and polyadenylation specific factor 1 protein-coding common_peak1_19_179_-0.800718868698898_7.09149366198023_4.80416691688046 chr2 145197569 145198049 + 4.80416691688046 NA Intergenic Intergenic -44802 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding common_peak2_131_848_0.300923826480552_9.88008265679331_4.80399449685111 chr14 27190944 27193878 + 4.80399449685111 NA intron (NM_001289686, intron 2 of 12) intron (NM_001289686, intron 2 of 12) -45599 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_43_176_0.61880450379731_7.77700780198165_4.80288921455147 chr11 94601356 94602188 + 4.80288921455147 NA promoter-TSS (NM_153807) promoter-TSS (NM_153807) 14 NM_153807 264895 Mm.386885 NM_153807 ENSMUSG00000076435 Acsf2 - acyl-CoA synthetase family member 2 protein-coding common_peak2_88_819_-0.346461730741257_9.50624923413482_4.80233880770909 chr19 40512637 40514453 + 4.80233880770909 NA 5' UTR (NM_178362, exon 1 of 29) 5' UTR (NM_178362, exon 1 of 29) 191 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding unique_peak2_12_122_-1.01370557188466_6.43566171939691_4.80198905947999 chr15 101387362 101388313 + 4.80198905947999 NA Intergenic Intergenic -17712 NM_028770 74127 Mm.440055 NM_028770 ENSMUSG00000037185 Krt80 1200016G03Rik|2310041I20Rik|Kb20 keratin 80 protein-coding unique_peak2_12_122_-1.01370557188466_6.43566171939691_4.80198905947999-2 chr2 142902358 142903039 + 4.80198905947999 NA promoter-TSS (NR_131921) promoter-TSS (NR_131921) -267 NR_131921 75053 Mm.72638 NR_131921 ENSMUSG00000086504 Kif16bos 4930511F01Rik kinesin family member 16B, opposite strand ncRNA common_peak1_12_122_-1.01370557188466_6.43566171939691_4.80198905947999 chr8 115705618 115705917 + 4.80198905947999 NA exon (NM_001025577, exon 1 of 1) exon (NM_001025577, exon 1 of 1) 1127 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_27_247_-0.66763156036895_7.6203805302024_4.80176945181487-2 chr5 30907863 30908317 + 4.80176945181487 NA promoter-TSS (NM_001134692) promoter-TSS (NM_001134692) -302 NM_024460 67695 Mm.21450 NM_024460 ENSMUSG00000038803 Ost4 2310016E02Rik oligosaccharyltransferase complex subunit 4 (non-catalytic) protein-coding common_peak1_27_247_-0.66763156036895_7.6203805302024_4.80176945181487 chr2 60878258 60878773 + 4.80176945181487 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 2923 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak2_8_90_-1.22972158951238_5.8929338454425_4.80117233128712-2 chr2 181220033 181220837 + 4.80117233128712 NA intron (NM_199312, intron 1 of 2) intron (NM_199312, intron 1 of 2) 419 NM_199312 332713 Mm.23349 NM_199312 ENSMUSG00000047841 BC051628 1700026M20Rik|Fndc11 cDNA sequence BC051628 protein-coding unique_peak2_8_90_-1.22972158951238_5.8929338454425_4.80117233128712-3 chr9 113811727 113812616 + 4.80117233128712 NA promoter-TSS (NM_029633) promoter-TSS (NM_029633) -415 NM_001286601 76499 Mm.222272 NM_029633 ENSMUSG00000033392 Clasp2 1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627 CLIP associating protein 2 protein-coding unique_peak2_8_90_-1.22972158951238_5.8929338454425_4.80117233128712 chr12 17387847 17388614 + 4.80117233128712 NA intron (NM_001008421, intron 13 of 20) intron (NM_001008421, intron 13 of 20) 32838 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA common_peak1_23_66_0.947686277634323_6.53993232927493_4.80110230881571-2 chr18 23840934 23841509 + 4.80110230881571 NA intron (NM_001162942, intron 3 of 7) intron (NM_001162942, intron 3 of 7) 37251 NM_153058 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak1_23_66_0.947686277634323_6.53993232927493_4.80110230881571 chr16 52452634 52453229 + 4.80110230881571 NA promoter-TSS (NM_009655) promoter-TSS (NM_009655) 66 NM_009655 11658 Mm.288282 NM_009655 ENSMUSG00000022636 Alcam AI853494|BEN|CD166|DM-GRASP|MuSC|SC1 activated leukocyte cell adhesion molecule protein-coding common_peak1_147_990_0.280267026397636_10.0928747603853_4.80048355937467 chr14 54252982 54253972 + 4.80048355937467 NA promoter-TSS (NM_001205181) promoter-TSS (NM_001205181) 452 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_22_205_-0.748039723089708_7.31248066563836_4.80011805949463-2 chr2 60845810 60846375 + 4.80011805949463 NA intron (NM_020296, intron 1 of 13) L1M3|LINE|L1 35346 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_22_205_-0.748039723089708_7.31248066563836_4.80011805949463-3 chr7 75483353 75483832 + 4.80011805949463 NA intron (NM_029332, intron 1 of 36) Lx5|LINE|L1 28058 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_22_205_-0.748039723089708_7.31248066563836_4.80011805949463 chr11 54801931 54802436 + 4.80011805949463 NA Intergenic Intergenic -14480 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding unique_peak2_16_155_-0.881865957888077_6.84446923991821_4.79955284634405 chr11 119623270 119624319 + 4.79955284634405 NA intron (NM_028898, intron 1 of 33) intron (NM_028898, intron 1 of 33) 20889 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak1_16_155_-0.881865957888077_6.84446923991821_4.79955284634405 chr13 52829533 52829882 + 4.79955284634405 NA Intergenic B4|SINE|B4 -72502 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak1_16_155_-0.881865957888077_6.84446923991821_4.79955284634405-2 chr2 11195053 11195454 + 4.79955284634405 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 22871 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_38_343_-0.553321305094237_8.14960410215498_4.79928711156769 chr12 100895802 100896529 + 4.79928711156769 NA intron (NM_175493, intron 1 of 2) intron (NM_175493, intron 1 of 2) 3359 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding common_peak2_38_343_-0.553321305094237_8.14960410215498_4.79928711156769 chr5 136986976 136988041 + 4.79928711156769 NA promoter-TSS (NM_001310748) promoter-TSS (NM_001310748) 451 NM_027318 70103 Mm.273147 NM_027318 ENSMUSG00000059518 Znhit1 2700001K05Rik|ZNFN4A1 zinc finger, HIT domain containing 1 protein-coding common_peak1_41_164_0.637764740739039_7.68520458461534_4.79909959934897 chr5 118245212 118245958 + 4.79909959934897 NA promoter-TSS (NM_172998) promoter-TSS (NM_172998) 358 NM_001081236 76792 Mm.103428 NM_001081236 ENSMUSG00000032840 2410131K14Rik - RIKEN cDNA 2410131K14 gene protein-coding common_peak2_62_300_0.487989483192081_8.47761441835574_4.79906094150406 chr17 33717916 33719163 + 4.79906094150406 NA intron (NR_045522, intron 1 of 6) CpG 138 NM_145486 224703 Mm.311439 NM_145486 ENSMUSG00000079557 March2 9530046H09Rik|MARCH-II membrane-associated ring finger (C3HC4) 2 protein-coding common_peak1_565_5740_0.119668060357849_12.5469203704502_4.79835092436363 chr7 45919455 45924871 + 4.79835092436363 NA promoter-TSS (NM_010129) promoter-TSS (NM_010129) -737 NM_010129 13732 Mm.20829 NM_010129 ENSMUSG00000040212 Emp3 H-4|H4|HNMP-1|MI-35|Ymp epithelial membrane protein 3 protein-coding common_peak2_44_397_-0.510445982979018_8.38140162905414_4.79674450626001 chr15 96582784 96584490 + 4.79674450626001 NA intron (NM_134086, intron 12 of 15) intron (NM_134086, intron 12 of 15) 58325 NM_134086 105727 Mm.103568 NM_134086 ENSMUSG00000023169 Slc38a1 AA408026|AA409865|AL022800|AU015942|NAT2 solute carrier family 38, member 1 protein-coding unique_peak2_18_171_-0.825900551305208_7.01331447904949_4.79613713477961 chr3 137837418 137838651 + 4.79613713477961 NA Intergenic RLTR19B|LTR|ERVK -26453 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak1_18_171_-0.825900551305208_7.01331447904949_4.79613713477961 chr6 90369566 90370064 + 4.79613713477961 NA exon (NM_030260, exon 1 of 6) exon (NM_030260, exon 1 of 6) 321 NM_030260 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding common_peak1_18_171_-0.825900551305208_7.01331447904949_4.79613713477961-2 chrX 7883789 7884345 + 4.79613713477961 NA promoter-TSS (NM_078484) promoter-TSS (NM_078484) -177 NM_001083937 22232 Mm.214976 NM_078484 ENSMUSG00000031156 Slc35a2 AI327289|Had-1|Had1|Sfc8|UGT|Ugalt solute carrier family 35 (UDP-galactose transporter), member A2 protein-coding common_peak1_123_779_0.312576513357408_9.76361857042831_4.79446523984639 chr14 59340511 59342110 + 4.79446523984639 NA promoter-TSS (NM_001164327) promoter-TSS (NM_001164327) 20 NM_001164327 236451 Mm.247736 NM_001164327 ENSMUSG00000091649 Phf11b EG236451|Gm4902 PHD finger protein 11B protein-coding common_peak1_46_416_-0.500772486018645_8.45351733043534_4.79439104817374 chr11 97102030 97103033 + 4.79439104817374 NA intron (NM_019507, intron 1 of 5) B3A|SINE|B2 12800 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding unique_peak2_46_416_-0.500772486018645_8.45351733043534_4.79439104817374 chr13 85724047 85725680 + 4.79439104817374 NA Intergenic MLTR31FA_MM|LTR|ERVK 321932 NM_007749 12867 Mm.378898 NM_007749 ENSMUSG00000017778 Cox7c COXVIIc|Cox7c1 cytochrome c oxidase subunit VIIc protein-coding common_peak2_87_484_0.391181427992173_9.11743165107058_4.79432033700671 chr6 30508933 30510330 + 4.79432033700671 NA promoter-TSS (NM_027073) promoter-TSS (NM_027073) 152 NM_178625 72649 Mm.45418 NM_178625 ENSMUSG00000029782 Tmem209 2700094F01Rik|AI428435 transmembrane protein 209 protein-coding common_peak1_17_163_-0.852866642745417_6.93111868324538_4.79423109191558 chr9 59657692 59658150 + 4.79423109191558 NA intron (NM_001253883, intron 1 of 10) intron (NM_001253883, intron 1 of 10) 1553 NM_001253883 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding unique_peak2_17_163_-0.852866642745417_6.93111868324538_4.79423109191558 chr4 129603608 129604909 + 4.79423109191558 NA intron (NM_029748, intron 3 of 4) B1_Mur3|SINE|Alu 3551 NM_029748 76799 Mm.293096 NM_029748 ENSMUSG00000028797 Tmem234 1500002D11Rik|2510006D16Rik|4933407D05Rik transmembrane protein 234 protein-coding common_peak2_66_328_0.468599926414482_8.59624373694248_4.7938631256087 chr17 50579896 50581313 + 4.7938631256087 NA intron (NM_013880, intron 1 of 5) intron (NM_013880, intron 1 of 5) 71057 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak1_154_1514_-0.250314286747686_10.4399449349865_4.79284301676022-2 chr4 43935950 43937876 + 4.79284301676022 NA intron (NM_016678, intron 16 of 20) intron (NM_016678, intron 16 of 20) -20789 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak1_154_1514_-0.250314286747686_10.4399449349865_4.79284301676022 chr11 107102702 107104329 + 4.79284301676022 NA intron (NM_176850, intron 2 of 27) intron (NM_176850, intron 2 of 27) 28407 NM_176850 207165 Mm.343986 NM_176850 ENSMUSG00000040481 Bptf 9430093H17Rik|Falz bromodomain PHD finger transcription factor protein-coding common_peak2_80_431_0.41145458082941_8.96061479257817_4.79235116521372 chr2 154436391 154437288 + 4.79235116521372 NA intron (NM_001285446, intron 1 of 10) CpG 355 NM_009823 12396 Mm.29914 NM_009823 ENSMUSG00000038533 Cbfa2t2 A430091M07|C330013D05Rik|Cbfa2t2h|MTGR1 core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) protein-coding common_peak1_42_379_-0.524128438076996_8.30779138929245_4.79135888886388 chr2 79001080 79001914 + 4.79135888886388 NA Intergenic Intergenic 132450 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_42_379_-0.524128438076996_8.30779138929245_4.79135888886388-2 chr2 126475575 126476485 + 4.79135888886388 NA intron (NM_001080944, intron 3 of 27) intron (NM_001080944, intron 3 of 27) 15523 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding unique_peak2_56_259_0.522130906521719_8.28343326628931_4.79082694251728 chr19 4226706 4228665 + 4.79082694251728 NA intron (NR_132308, intron 2 of 3) intron (NR_132308, intron 2 of 3) -4208 NM_027196 69745 Mm.32518 NM_027196 ENSMUSG00000024854 Pold4 2410012M21Rik|AI463381|AW060307|Polds|p12 polymerase (DNA-directed), delta 4 protein-coding common_peak1_33_299_-0.598670118335354_7.9294836313282_4.78920562098416 chr13 30611767 30612690 + 4.78920562098416 NA Intergenic Intergenic -2815 NR_045975 75090 Mm.292232 NR_045975 ENSMUSG00000086263 4930519D14Rik - RIKEN cDNA 4930519D14 gene ncRNA common_peak2_97_563_0.363937195698247_9.32151995024792_4.78889686757562 chr1 171344822 171346342 + 4.78889686757562 NA promoter-TSS (NM_011070) promoter-TSS (NM_011070) 63 NM_001242580 27045 Mm.12915 NM_012049 ENSMUSG00000013997 Nit1 AI255805|ESTM30|W57327 nitrilase 1 protein-coding common_peak2_178_1781_-0.229737036099154_10.6844131034723_4.78686410819933 chr7 104285941 104289348 + 4.78686410819933 NA intron (NM_001310602, intron 1 of 7) intron (NM_001310602, intron 1 of 7) 462 NM_001310602 667823 Mm.482375 NM_001310602 ENSMUSG00000060441 Trim5 EG667823|Gm8833 tripartite motif-containing 5 protein-coding common_peak1_20_188_-0.784767780422575_7.16985853400979_4.78639303778284 chr10 12888610 12889147 + 4.78639303778284 NA Intergenic Intergenic -27143 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_83_769_-0.358015369411053_9.40970695087674_4.78586003198714 chr15 3995099 3995902 + 4.78586003198714 NA promoter-TSS (NR_045740) promoter-TSS (NR_045740) 252 NM_145930 106064 Mm.21299 NM_145930 ENSMUSG00000041935 AW549877 AI195826 expressed sequence AW549877 protein-coding common_peak2_102_961_-0.318345199993303_9.75072048377339_4.78583470678527 chr10 97312463 97314417 + 4.78583470678527 NA Intergenic Intergenic -110038 NR_039547 100628616 NR_039547 ENSMUSG00000105557 Mir3966 mmu-mir-3966|mu-mir-3966 microRNA 3966 ncRNA common_peak1_88_492_0.387574532386276_9.13923110257105_4.78533321694516 chr11 11563580 11565169 + 4.78533321694516 NA Intergenic Intergenic 63464 NM_001305143 102631730 Mm.159430 NM_001305143 ENSMUSG00000062511 4930512M02Rik - RIKEN cDNA 4930512M02 gene protein-coding common_peak1_98_571_0.361583127035775_9.34066290029628_4.78482728567962 chr4 12089384 12090160 + 4.78482728567962 NA intron (NM_198957, intron 2 of 3) CpG-9730 402 NM_198957 77604 Mm.474129 NM_198957 ENSMUSG00000052137 Rbm12b2 AV299215|C430048L16Rik|Rbm12bb RNA binding motif protein 12 B2 protein-coding common_peak2_72_661_-0.388368380421589_9.17650321659642_4.78467217152906 chr10 112001380 112003425 + 4.78467217152906 NA Intergenic MTD|LTR|ERVL-MaLR -5138 NM_028608 73690 Mm.173790 NM_028608 ENSMUSG00000056888 Glipr1 2410114O14Rik|RTVP-1|RTVP1|mRTVP-1 GLI pathogenesis-related 1 (glioma) protein-coding common_peak1_287_2398_0.182917164324657_11.3196760244558_4.78288878495994 chr4 43560767 43563355 + 4.78288878495994 NA promoter-TSS (NM_013497) promoter-TSS (NM_013497) 522 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding common_peak1_104_981_-0.313998983637873_9.78257972249576_4.78277880813084 chr17 32349639 32350663 + 4.78277880813084 NA intron (NM_017476, intron 1 of 13) intron (NM_017476, intron 1 of 13) 426 NM_017476 54194 Mm.281005 NM_017476 ENSMUSG00000002625 Akap8l HAP95|Nakap95 A kinase (PRKA) anchor protein 8-like protein-coding common_peak1_214_1633_0.219640488986588_10.784012512639_4.78221002677679 chr11 65806405 65807834 + 4.78221002677679 NA promoter-TSS (NM_001302375) promoter-TSS (NM_001302375) -56 NM_001302374 52712 Mm.340052 NM_026107 ENSMUSG00000018347 Zkscan6 1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18 zinc finger with KRAB and SCAN domains 6 protein-coding common_peak2_68_622_-0.400493032777208_9.0828418366354_4.78113761986912 chr6 85136945 85138203 + 4.78113761986912 NA exon (NM_011467, exon 1 of 3) exon (NM_011467, exon 1 of 3) 190 NM_011467 20751 Mm.28393 NM_011467 ENSMUSG00000033735 Spr AA409688|ENSMUSG00000071345|Gm10328 sepiapterin reductase protein-coding common_peak1_134_1296_-0.270649610533784_10.2056379589848_4.78061629198321 chr2 26139592 26141036 + 4.78061629198321 NA promoter-TSS (NM_001256522) promoter-TSS (NM_001256522) 192 NM_001256521 109299 Mm.389259 NM_001256521 C330006A16Rik AI551216 RIKEN cDNA C330006A16 gene protein-coding common_peak1_71_364_0.446157330478_8.73483131900638_4.78017170947764 chr9 14365796 14367078 + 4.78017170947764 NA intron (NM_028013, intron 1 of 1) intron (NM_028013, intron 1 of 1) 14805 NM_028013 71946 Mm.41423 NM_028013 ENSMUSG00000037419 Endod1 2210414F18Rik|2310067E08Rik|C85344 endonuclease domain containing 1 protein-coding common_peak1_307_2618_0.175145818795182_11.4423732537482_4.77998592416257 chr15 102149398 102151784 + 4.77998592416257 NA promoter-TSS (NM_146064) promoter-TSS (NM_146064) 16 NM_146064 223920 Mm.358862 NM_146064 ENSMUSG00000023045 Soat2 ACAT2|D15Wsu97e sterol O-acyltransferase 2 protein-coding common_peak2_141_937_0.286327744517997_10.0166079847744_4.7796206926763 chr11 51755400 51757388 + 4.7796206926763 NA 5' UTR (NM_175255, exon 1 of 23) 5' UTR (NM_175255, exon 1 of 23) 440 NM_001290785 77371 Mm.33878 NM_175255 ENSMUSG00000036391 Sec24a - Sec24 related gene family, member A (S. cerevisiae) protein-coding common_peak1_78_719_-0.369754005216357_9.3069760937215_4.77925984452049 chr9 108049149 108050132 + 4.77925984452049 NA TTS (NM_013785) TTS (NM_013785) 350 NM_177910 331026 Mm.22554 NM_177910 ENSMUSG00000070284 Gmppb AI317178|E430010H19 GDP-mannose pyrophosphorylase B protein-coding common_peak1_64_584_-0.41537829413787_8.98460366740183_4.77896937230984 chr10 53772216 53773134 + 4.77896937230984 NA Intergenic Intergenic -21766 NM_001081428 75906 Mm.436785 NM_001081428 ENSMUSG00000019856 Fam184a 3110012E06Rik|4930438C08Rik|4930589M24Rik family with sequence similarity 184, member A protein-coding common_peak2_183_1837_-0.225623313636456_10.7311093944708_4.77875371638265 chr17 44104364 44109031 + 4.77875371638265 NA promoter-TSS (NM_199016) promoter-TSS (NM_199016) -889 NM_199016 224794 Mm.255971 NM_199016 ENSMUSG00000023961 Enpp4 4933413N07Rik|AA986363|AI195364|E-NPP 4|Gm90|mKIAA0879 ectonucleotide pyrophosphatase/phosphodiesterase 4 protein-coding common_peak1_31_107_0.767978072148056_7.1388765382375_4.77844258505555 chr10 20104074 20104679 + 4.77844258505555 NA intron (NM_008580, intron 18 of 29) intron (NM_008580, intron 18 of 29) -44544 NM_008635 17761 Mm.20928 NM_008635 ENSMUSG00000019996 Map7 E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste microtubule-associated protein 7 protein-coding common_peak1_31_107_0.767978072148056_7.1388765382375_4.77844258505555-2 chr15 76770378 76770937 + 4.77844258505555 NA intron (NM_198420, intron 1 of 10) Lx7|LINE|L1 -46812 NM_176828 223665 Mm.291713 NM_145472 ENSMUSG00000033707 C030006K11Rik 1110033I13Rik RIKEN cDNA C030006K11 gene protein-coding common_peak2_350_3103_0.161299639727302_11.6805626620508_4.77658905420397 chr11 72959982 72964813 + 4.77658905420397 NA intron (NM_016745, intron 1 of 21) intron (NM_016745, intron 1 of 21) 1228 NM_001163337 53313 Mm.6306 NM_016745 ENSMUSG00000020788 Atp2a3 SERCA3b|Serca3 ATPase, Ca++ transporting, ubiquitous protein-coding common_peak1_85_788_-0.351542008573153_9.44811048572688_4.77538000444902 chr1 40478349 40479736 + 4.77538000444902 NA intron (NM_001161843, intron 5 of 9) intron (NM_001161843, intron 5 of 9) 13036 NM_008365 16182 Mm.253664 NM_008365 ENSMUSG00000026070 Il18r1 Il18ralpha|Il1rrp interleukin 18 receptor 1 protein-coding unique_peak2_47_424_-0.490931251746613_8.48585340515176_4.77404018782445 chr16 10768144 10770597 + 4.77404018782445 NA Intergenic CT-rich|Low_complexity|Low_complexity 16166 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding common_peak1_256_2066_0.196278975731229_11.1114621612911_4.7710430118348 chr8 33928763 33930882 + 4.7710430118348 NA promoter-TSS (NM_001042675) promoter-TSS (NM_001042675) 41 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_190_1396_0.236255200577331_10.5662439056981_4.76750639760311 chr11 69995445 69997439 + 4.76750639760311 NA promoter-TSS (NM_001291126) promoter-TSS (NM_001291126) -499 NM_001291126 78246 Mm.20805 NM_030064 ENSMUSG00000018572 Phf23 JUNE-1 PHD finger protein 23 protein-coding common_peak2_67_336_0.460156102165024_8.62668283226437_4.76737711374625 chrX 56597317 56598741 + 4.76737711374625 NA promoter-TSS (NM_146234) promoter-TSS (NM_146234) -110 NM_146234 236792 Mm.291824 NM_146234 ENSMUSG00000061273 Mmgt1 9630048L06Rik|BC032271|Emc5|Mir5116|Tmem32|mir-5116 membrane magnesium transporter 1 protein-coding common_peak1_161_1120_0.262383831373809_10.2617624784923_4.76691042650734 chr1 151499857 151501590 + 4.76691042650734 NA promoter-TSS (NM_011277) promoter-TSS (NM_011277) 100 NM_011277 19821 Mm.474038 NM_011277 ENSMUSG00000026484 Rnf2 AI326319|AI450156|AU019207|Ring1B|dinG ring finger protein 2 protein-coding common_peak2_38_146_0.673271104771496_7.53630789722211_4.76668921209014 chr5 36176442 36177735 + 4.76668921209014 NA intron (NM_030889, intron 2 of 26) intron (NM_030889, intron 2 of 26) -26933 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding common_peak1_44_182_0.610478799280589_7.82093923792434_4.76629671874882-2 chr9 122886750 122887398 + 4.76629671874882 NA Intergenic CpG -1397 NM_001177505 382118 Mm.86999 NM_001177505 ENSMUSG00000063488 Zkscan7 BC042569|Zfp167 zinc finger with KRAB and SCAN domains 7 protein-coding common_peak1_44_182_0.610478799280589_7.82093923792434_4.76629671874882 chr4 32264034 32265062 + 4.76629671874882 NA Intergenic L1MB5|LINE|L1 -152887 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_102_604_0.350756551614783_9.41616960796935_4.76620576995204 chr9 69397683 69398759 + 4.76620576995204 NA intron (NM_145618, intron 1 of 15) intron (NM_145618, intron 1 of 15) 223 NM_145618 93697 Mm.35911 NM_145618 ENSMUSG00000032235 Ice2 B230343B06Rik|Narg2 interactor of little elongation complex ELL subunit 2 protein-coding unique_peak2_10_106_-1.10828155489355_6.18732620895437_4.76519391081556 chr4 11914677 11915531 + 4.76519391081556 NA Intergenic Intergenic 50609 NM_001098231 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding unique_peak2_10_106_-1.10828155489355_6.18732620895437_4.76519391081556-2 chrX 75730249 75730907 + 4.76519391081556 NA intron (NR_029443, intron 8 of 8) intron (NR_029443, intron 8 of 8) 34121 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA common_peak1_135_884_0.293839549562881_9.9364534197518_4.76434458387936 chr6 88044088 88045265 + 4.76434458387936 NA intron (NM_001293652, intron 1 of 7) intron (NM_001293652, intron 1 of 7) 341 NM_001293653 19349 Mm.333233 NM_009005 ENSMUSG00000079477 Rab7 Rab7a RAB7, member RAS oncogene family protein-coding common_peak2_183_1328_0.242172348376405_10.4972115634644_4.76426271445837 chr4 143411828 143413645 + 4.76426271445837 NA 5' UTR (NM_172877, exon 1 of 5) 5' UTR (NM_172877, exon 1 of 5) 310 NM_172877 242736 Mm.275953 NM_172877 ENSMUSG00000046862 Pramef8 4732496O08Rik|AU023234 PRAME family member 8 protein-coding common_peak2_46_195_0.588421243310809_7.90892046577061_4.76389258629235 chr4 116720164 116721620 + 4.76389258629235 NA promoter-TSS (NM_146151) promoter-TSS (NM_146151) -63 NM_146151 230661 Mm.482431 NM_146151 ENSMUSG00000033985 Tesk2 - testis-specific kinase 2 protein-coding common_peak1_46_195_0.588421243310809_7.90892046577061_4.76389258629235 chr7 132787297 132788186 + 4.76389258629235 NA promoter-TSS (NM_175268) promoter-TSS (NM_175268) -806 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_36_135_0.692320809961071_7.43362324623087_4.76366164953012 chr16 14088449 14089082 + 4.76366164953012 NA intron (NM_144518, intron 2 of 5) MTEa|LTR|ERVL-MaLR 70509 NM_001081154 223989 Mm.85442 NM_001081154 ENSMUSG00000060657 Marf1 4921513D23Rik|BC031575|C87306|E030019O05|Lkap|mKIAA0430 meiosis arrest female 1 protein-coding common_peak1_57_266_0.51457969401137_8.31798577869324_4.76329867388527 chr16 15862525 15863638 + 4.76329867388527 NA 5' UTR (NM_029354, exon 1 of 3) 5' UTR (NM_029354, exon 1 of 3) 241 NM_029354 72083 Mm.22351 NM_029354 ENSMUSG00000022671 Mzt2 2410018G20Rik|2610001E06Rik|Fam128|Fam128b mitotic spindle organizing protein 2 protein-coding common_peak2_74_680_-0.381361279722405_9.22083034815087_4.76300900742519 chr13 43398158 43399287 + 4.76300900742519 NA intron (NM_023554, intron 1 of 7) CpG 346 NM_023554 70078 Mm.439927 NM_023554 ENSMUSG00000063200 Nol7 2210008F15Rik|5730556I21Rik|NOP27|RARG-1 nucleolar protein 7 protein-coding common_peak1_74_680_-0.381361279722405_9.22083034815087_4.76300900742519 chr16 36874145 36874914 + 4.76300900742519 NA intron (NM_134111, intron 1 of 5) intron (NM_134111, intron 1 of 5) 297 NM_134111 106389 Mm.432078 NM_134111 ENSMUSG00000022838 Eaf2 AW048865|FESTA-L|FESTA-S|Festa|Traits|U19 ELL associated factor 2 protein-coding common_peak1_144_1404_-0.259585513717399_10.3265616582496_4.76277417528146 chr2 73450145 73451949 + 4.76277417528146 NA intron (NM_153138, intron 1 of 7) intron (NM_153138, intron 1 of 7) 2842 NM_001289722 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak2_211_1603_0.221507961360905_10.7582124071354_4.76273305533961 chr11 115707229 115709330 + 4.76273305533961 NA intron (NM_008163, intron 1 of 5) GC_rich|Low_complexity|Low_complexity 318 NM_008163 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding common_peak1_247_1972_0.200343897569816_11.0463471895085_4.76258262284418 chr9 72531307 72533421 + 4.76258262284418 NA promoter-TSS (NR_045735) promoter-TSS (NR_045735) 124 NM_001033536 319758 Mm.32081 NM_001033536 ENSMUSG00000037674 Rfx7 2510005N23Rik|9930116O05Rik|D130086K05Rik|Rfxdc2 regulatory factor X, 7 protein-coding common_peak1_15_32_1.25185914376671_5.67032369124181_4.76184838722877 chr9 113932599 113933051 + 4.76184838722877 NA intron (NM_013699, intron 2 of 15) intron (NM_013699, intron 2 of 15) 1891 NM_013699 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding unique_peak1_15_32_1.25185914376671_5.67032369124181_4.76184838722877-5 chr19 53216485 53216774 + 4.76184838722877 NA intron (NM_013758, intron 2 of 15) B3|SINE|B2 38576 NR_036590 69319 Mm.57452 NR_036590 1700001K23Rik - RIKEN cDNA 1700001K23 gene ncRNA unique_peak1_15_32_1.25185914376671_5.67032369124181_4.76184838722877-4 chr11 118234584 118234986 + 4.76184838722877 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 13807 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak1_15_32_1.25185914376671_5.67032369124181_4.76184838722877-2 chr1 43471849 43472245 + 4.76184838722877 NA intron (NM_010879, intron 1 of 4) intron (NM_010879, intron 1 of 4) 26296 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding unique_peak1_15_32_1.25185914376671_5.67032369124181_4.76184838722877-6 chr6 129760712 129761024 + 4.76184838722877 NA Intergenic Intergenic 14981 NM_001014997 232415 Mm.290598 NM_001014997 ENSMUSG00000071158 Gm156 Klrh1 predicted gene 156 protein-coding unique_peak1_15_32_1.25185914376671_5.67032369124181_4.76184838722877 chr1 36772765 36773170 + 4.76184838722877 NA intron (NM_001289765, intron 3 of 12) B3A|SINE|B2 -6017 NM_001289612 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding unique_peak1_15_32_1.25185914376671_5.67032369124181_4.76184838722877-3 chr1 80731720 80732178 + 4.76184838722877 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 26604 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak1_27_86_0.843621254169197_6.86475412293333_4.76127452932591 chr11 97840584 97841160 + 4.76127452932591 NA promoter-TSS (NM_001080935) promoter-TSS (NM_001080935) 92 NM_001080935 68127 Mm.110270 NM_001080935 ENSMUSG00000050538 B230217C12Rik AI840637 RIKEN cDNA B230217C12 gene protein-coding unique_peak2_27_86_0.843621254169197_6.86475412293333_4.76127452932591-2 chr18 36515421 36516206 + 4.76127452932591 NA promoter-TSS (NM_010415) promoter-TSS (NM_010415) -8 NM_010415 15200 Mm.289681 NM_010415 ENSMUSG00000024486 Hbegf AW047313|Dtr|Dts|Hegfl heparin-binding EGF-like growth factor protein-coding unique_peak2_27_86_0.843621254169197_6.86475412293333_4.76127452932591 chr1 60977776 60978600 + 4.76127452932591 NA intron (NM_017480, intron 1 of 4) intron (NM_017480, intron 1 of 4) 274 NM_017480 54167 Mm.42044 NM_017480 ENSMUSG00000026009 Icos AILIM|CCLP|CRP-1|H4|Ly115 inducible T cell co-stimulator protein-coding common_peak1_164_1623_-0.239910382645975_10.5453807258622_4.76090237313405 chr8 94837681 94839203 + 4.76090237313405 NA promoter-TSS (NM_134141) promoter-TSS (NM_134141) 25 NM_026452 67914 Mm.169234 NM_026452 ENSMUSG00000031782 Coq9 2310005O14Rik|C78387 coenzyme Q9 protein-coding common_peak2_87_808_-0.346973527363314_9.48650912874832_4.76042176336213 chr15 68361857 68363383 + 4.76042176336213 NA Intergenic Intergenic -21331 NR_029718 387228 NR_029718 ENSMUSG00000065437 Mir30d Mirn30d|mir-30d|mmu-mir-30d microRNA 30d ncRNA common_peak1_60_287_0.49459444960466_8.41722222624464_4.76035939981765 chr1 127345947 127346926 + 4.76035939981765 NA intron (NM_145128, intron 4 of 17) intron (NM_145128, intron 4 of 17) 141450 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak2_182_1318_0.243425117948712_10.4869414082259_4.76007672873338 chr11 97149230 97152074 + 4.76007672873338 NA promoter-TSS (NM_198100) promoter-TSS (NM_198100) -940 NM_198100 73174 Mm.27882 NM_198100 ENSMUSG00000038517 Tbkbp1 3110043L15Rik|ProSAPiP2|SINTBAD TBK1 binding protein 1 protein-coding common_peak1_37_334_-0.561040770761889_8.10749689996419_4.7598818963523 chr7 80787905 80788757 + 4.7598818963523 NA intron (NM_016721, intron 2 of 37) MIRb|SINE|MIR 15000 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_21_57_1.00181674756638_6.35888936891076_4.75923692790567 chr6 54847233 54847755 + 4.75923692790567 NA intron (NM_199143, intron 1 of 4) B1_Mus2|SINE|Alu 30578 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_32_290_-0.607555395247403_7.88109764528458_4.75746870923898-2 chrX 35892189 35892914 + 4.75746870923898 NA intron (NM_001009947, intron 1 of 52) intron (NM_001009947, intron 1 of 52) 3719 NM_001009947 75974 Mm.32873 NM_177745 ENSMUSG00000031093 Dock11 5033414A21Rik|8030476J24|Zizimin2|sph238 dedicator of cytokinesis 11 protein-coding common_peak1_32_290_-0.607555395247403_7.88109764528458_4.75746870923898 chr1 138136179 138136695 + 4.75746870923898 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 38689 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_80_739_-0.365039377523434_9.3488617717546_4.75738506442625 chr13 110563510 110564732 + 4.75738506442625 NA Intergenic Intergenic 169077 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo-like kinase 2 protein-coding common_peak2_147_991_0.278811963197249_10.0936022919855_4.75623038148904 chr5 138262367 138264735 + 4.75623038148904 NA promoter-TSS (NR_045821) promoter-TSS (NR_045821) -494 NR_045821 69004 Mm.439868 NR_045821 ENSMUSG00000085227 6330418K02Rik - RIKEN cDNA 6330418K02 gene ncRNA common_peak2_171_1701_-0.2340635290593_10.6159835571563_4.75614816334275 chr4 117119503 117121973 + 4.75614816334275 NA non-coding (NR_024078, exon 7 of 7) non-coding (NR_024078, exon 7 of 7) 4987 NR_024078 78611 Mm.446227 NM_001033187 Btbd19 9530048O09Rik|BB115071 BTB (POZ) domain containing 19 ncRNA unique_peak2_13_130_-0.97347056270588_6.54668772018451_4.75374016847858 chr17 3155583 3156465 + 4.75374016847858 NA intron (NM_134123, intron 3 of 19) intron (NM_134123, intron 3 of 19) 41052 NM_134123 106583 Mm.124373 NM_134123 ENSMUSG00000046201 Scaf8 A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116 SR-related CTD-associated factor 8 protein-coding common_peak2_88_818_-0.34470127287682_9.5053690052026_4.75368287362846 chr2 15048367 15049983 + 4.75368287362846 NA 5' UTR (NM_028950, exon 1 of 11) 5' UTR (NM_028950, exon 1 of 11) 137 NM_001165942 74455 Mm.478923 NM_028950 ENSMUSG00000026707 Nsun6 4933403D21Rik|4933414E04Rik|NOPD1 NOL1/NOP2/Sun domain family member 6 protein-coding common_peak1_19_48_1.07642438351557_6.15292203587299_4.75285383831749-2 chr18 14782167 14782625 + 4.75285383831749 NA promoter-TSS (NM_001100449) promoter-TSS (NM_001100449) -849 NM_001100449 72504 Mm.312233 NM_001100449 ENSMUSG00000054321 Taf4b 105kDa|2610524B04Rik|4932409F03Rik|AW987595|TAFII-105|TAFII105|Taf2c2 TATA-box binding protein associated factor 4b protein-coding common_peak1_19_48_1.07642438351557_6.15292203587299_4.75285383831749 chr1 55237953 55238483 + 4.75285383831749 NA exon (NM_175439, exon 1 of 1) exon (NM_175439, exon 1 of 1) 1041 NM_175439 212679 Mm.19223 NM_175439 ENSMUSG00000046994 Mars2 C730026E21Rik|MetRS methionine-tRNA synthetase 2 (mitochondrial) protein-coding unique_peak1_19_48_1.07642438351557_6.15292203587299_4.75285383831749 chr1 63730636 63731026 + 4.75285383831749 NA promoter-TSS (NM_029696) promoter-TSS (NM_029696) 206 NM_172422 75619 Mm.30965 NM_172422 ENSMUSG00000025962 Fastkd2 2810421I24Rik FAST kinase domains 2 protein-coding common_peak1_84_462_0.396773464592256_9.05325511555636_4.75216750851228 chr19 17393873 17395029 + 4.75216750851228 NA intron (NM_019437, intron 1 of 3) CpG 408 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding common_peak1_353_3139_0.159724388602474_11.6964110380802_4.75148745142766 chr10 12810989 12814742 + 4.75148745142766 NA intron (NM_011682, intron 1 of 73) PB1D10|SINE|Alu 48870 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_22_62_0.961180880593593_6.45787036379671_4.75142289488066 chr11 107414995 107415447 + 4.75142289488066 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 55499 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_237_1868_0.20563382768084_10.9708677675856_4.75079475630746 chr12 104234643 104238465 + 4.75079475630746 NA intron (NM_009251, intron 2 of 5) intron (NM_009251, intron 2 of 5) -11342 NR_033450 546546 Mm.390522 NM_001034870 Serpina3h 6C28|Spi2 serine (or cysteine) peptidase inhibitor, clade A, member 3H pseudo common_peak1_219_1684_0.215982764689407_10.8265242584139_4.75007280599185 chrX 20687144 20689028 + 4.75007280599185 NA promoter-TSS (NM_011049) promoter-TSS (NM_011049) 132 NM_001310456 18555 Mm.102574 NM_011049 ENSMUSG00000031065 Cdk16 Crk5|Pctaire1|Pctk1 cyclin-dependent kinase 16 protein-coding unique_peak2_39_352_-0.545777834454048_8.19063545604416_4.75003521280629 chr8 122692457 122694404 + 4.75003521280629 NA intron (NM_009824, intron 1 of 11) intron (NM_009824, intron 1 of 11) 5679 NM_009824 12398 Mm.194339 NM_009824 ENSMUSG00000006362 Cbfa2t3 A630044F12Rik|AI465270|AW229127|Cbfa2t3h|ETO-2|Eto2|MTGR2 core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) protein-coding common_peak2_64_315_0.473133772155794_8.540347634255_4.74940077051156 chr13 100201260 100202755 + 4.74940077051156 NA 5' UTR (NM_010872, exon 1 of 16) 5' UTR (NM_010872, exon 1 of 16) 115 NM_001126182 17948 Mm.89961 NM_010872 ENSMUSG00000078945 Naip2 Birc1b|Naip-rs6 NLR family, apoptosis inhibitory protein 2 protein-coding common_peak2_146_983_0.278496247724728_10.0817626292016_4.74880475393853 chr1 143738878 143740499 + 4.74880475393853 NA promoter-TSS (NM_001038594) promoter-TSS (NM_001038594) 73 NM_023505 69367 Mm.272727 NM_023505 ENSMUSG00000018196 Glrx2 1700010P22Rik|AI645710|Grx2 glutaredoxin 2 (thioltransferase) protein-coding common_peak1_124_788_0.310239289001245_9.77900113451408_4.74848684172182 chr17 64331154 64331910 + 4.74848684172182 NA intron (NM_144859, intron 1 of 8) CpG 351 NM_144859 224938 Mm.489681 NM_144859 ENSMUSG00000024083 Pja2 AI447901|AL022700|Neurodap1|mKIAA0438 praja 2, RING-H2 motif containing protein-coding unique_peak2_25_230_-0.696327796775125_7.50358514302849_4.74827975523866 chr4 141213257 141214632 + 4.74827975523866 NA promoter-TSS (NM_001081174) promoter-TSS (NM_001081174) -12 NM_001081174 76166 Mm.271064 NM_001081174 ENSMUSG00000073733 Rsg1 6330545A04Rik|Gm723 REM2 and RAB-like small GTPase 1 protein-coding common_peak2_110_670_0.333749211164513_9.55704356178244_4.74795919803808 chr16 56716294 56718280 + 4.74795919803808 NA 5' UTR (NM_001252443, exon 1 of 7) 5' UTR (NM_001252443, exon 1 of 7) 163 NM_001252443 21787 Mm.425970 NM_019678 ENSMUSG00000022757 Tfg AI173908 Trk-fused gene protein-coding common_peak1_253_2035_0.197301159284704_11.090172425718_4.74789720223807 chr7 16308594 16310333 + 4.74789720223807 NA promoter-TSS (NM_133234) promoter-TSS (NM_133234) -120 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak1_41_370_-0.531188421635948_8.26968116580283_4.74753977705161 chr17 56078197 56079032 + 4.74753977705161 NA Intergenic B1_Mur1|SINE|Alu -1017 NM_001304784 15193 Mm.12966 NM_008233 ENSMUSG00000002833 Hdgfrp2 HRP-2 hepatoma-derived growth factor, related protein 2 protein-coding unique_peak2_7_82_-1.30539847940811_5.72234019164287_4.74640181726469 chr18 56446528 56447265 + 4.74640181726469 NA intron (NM_026240, intron 1 of 13) B2_Mm2|SINE|B2 14764 NM_026240 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|NS3TP2 GRAM domain containing 3 protein-coding unique_peak2_7_82_-1.30539847940811_5.72234019164287_4.74640181726469-2 chr9 106447352 106448094 + 4.74640181726469 NA promoter-TSS (NM_029631) promoter-TSS (NM_029631) -45 NM_001110272 68644 Mm.268925 NM_145919 ENSMUSG00000042210 Abhd14a 1110013B16Rik|AW558221|Dorz1 abhydrolase domain containing 14A protein-coding common_peak2_82_758_-0.358450206247118_9.38873097229191_4.74464492284552 chr7 90145300 90147748 + 4.74464492284552 NA intron (NM_001252520, intron 1 of 20) intron (NM_001252520, intron 1 of 20) 16292 NM_001252520 233489 Mm.235175 NM_146194 ENSMUSG00000039361 Picalm CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114 phosphatidylinositol binding clathrin assembly protein protein-coding common_peak2_198_1475_0.229504787787022_10.6422293999539_4.74461178399989 chr11 75934300 75938149 + 4.74461178399989 NA Intergenic Intergenic -10333 NM_001291159 380714 Mm.425697 NM_029548 ENSMUSG00000020847 Rph3al Gm1753|Noc2 rabphilin 3A-like (without C2 domains) protein-coding common_peak1_136_1317_-0.267797098473192_10.2302361057715_4.74424969463563 chr4 8646727 8647834 + 4.74424969463563 NA Intergenic CpG -43126 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak2_48_433_-0.484674995533794_8.51921373467758_4.74301235952639 chr18 23733819 23735711 + 4.74301235952639 NA Intergenic RMER1C|Other|Other 17540 NR_126066 100502834 Mm.213614 NR_126066 ENSMUSG00000086287 Gm15972 OTTMUSG00000028454 predicted gene 15972 ncRNA common_peak1_121_763_0.313702934197581_9.73428029513454_4.74269729212391 chr2 181837472 181838929 + 4.74269729212391 NA intron (NM_001291211, intron 1 of 6) intron (NM_001291211, intron 1 of 6) 346 NM_001291211 245867 Mm.491085 NM_153594 ENSMUSG00000027589 Pcmtd2 5330414D10Rik|AI314201 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 protein-coding common_peak2_604_6253_0.114108927588726_12.6676179677194_4.74212165294285 chr4 8836260 8844180 + 4.74212165294285 NA intron (NM_001277149, intron 17 of 37) MLT1A0|LTR|ERVL-MaLR 149814 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak2_273_2896_-0.177394101549186_11.4116469184958_4.74207419908916 chr6 134897238 134899279 + 4.74207419908916 NA promoter-TSS (NM_001167695) promoter-TSS (NM_001167695) 297 NR_029441 72813 Mm.409034 NR_029441 ENSMUSG00000100876 2810454H06Rik - RIKEN cDNA 2810454H06 gene ncRNA common_peak1_90_838_-0.340181957719777_9.54243602157993_4.7415913746875 chr10 77521306 77522569 + 4.7415913746875 NA Intergenic Intergenic -6124 NM_133998 108707 Mm.259547 NM_133998 ENSMUSG00000032977 Fam207a 1810008A18Rik|AI303072 family with sequence similarity 207, member A protein-coding unique_peak2_11_113_-1.045726857259_6.31002658553524_4.73992197307768 chr1 85796705 85797573 + 4.73992197307768 NA intron (NM_133781, intron 1 of 8) intron (NM_133781, intron 1 of 8) 3692 NM_133781 12283 Mm.26135 NM_133781 ENSMUSG00000036707 Cab39 AA408805|AA960512|C78372|MO25|MO25alpha calcium binding protein 39 protein-coding unique_peak2_11_113_-1.045726857259_6.31002658553524_4.73992197307768-2 chr1 165851675 165852600 + 4.73992197307768 NA intron (NR_103716, intron 1 of 8) MIRb|SINE|MIR 63456 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_11_113_-1.045726857259_6.31002658553524_4.73992197307768 chr17 56079593 56079886 + 4.73992197307768 NA 5' UTR (NM_001304785, exon 1 of 16) 5' UTR (NM_001304785, exon 1 of 16) 108 NM_001304785 15193 Mm.12966 NM_008233 ENSMUSG00000002833 Hdgfrp2 HRP-2 hepatoma-derived growth factor, related protein 2 protein-coding common_peak2_104_980_-0.31252909554242_9.78184477844803_4.73839715860677 chr15 10034562 10037554 + 4.73839715860677 NA Intergenic Intergenic -141180 NM_011169 19116 Mm.10516 NM_011169 ENSMUSG00000005268 Prlr AI987712|Pr-1|Pr-3|Prlr-rs1 prolactin receptor protein-coding common_peak2_278_2302_0.185652541248029_11.2621249664169_4.73834471535424 chr19 8773583 8775718 + 4.73834471535424 NA promoter-TSS (NM_026325) promoter-TSS (NM_026325) 165 NR_015538 100039957 Mm.220886 NR_015538 Gm2518 D630022E15Rik interferon induced transmembrane protein 2 pseudogene pseudo common_peak1_24_221_-0.708400674213722_7.44021552924325_4.73816931841141-2 chr4 135073130 135073612 + 4.73816931841141 NA Intergenic Intergenic -47274 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak1_24_221_-0.708400674213722_7.44021552924325_4.73816931841141-3 chr6 54849140 54849689 + 4.73816931841141 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 32498 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_24_221_-0.708400674213722_7.44021552924325_4.73816931841141 chr2 9868647 9869217 + 4.73816931841141 NA intron (NM_008091, intron 3 of 5) intron (NM_008091, intron 3 of 5) 9668 NM_008091 14462 Mm.313866 NM_008091 ENSMUSG00000015619 Gata3 Gata-3|jal GATA binding protein 3 protein-coding common_peak1_16_36_1.19408289534522_5.80649481330156_4.73612837605245 chr12 16590761 16591181 + 4.73612837605245 NA Intergenic Intergenic -1201 NM_172950 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding unique_peak1_16_36_1.19408289534522_5.80649481330156_4.73612837605245 chr10 41600032 41600479 + 4.73612837605245 NA intron (NM_001303469, intron 2 of 20) intron (NM_001303469, intron 2 of 20) 6340 NM_001303469 75973 Mm.228517 NM_029493 ENSMUSG00000075225 Ccdc162 5033413D22Rik|Ccdc162p|Gm29096|Gm61|Gm6976 coiled-coil domain containing 162 protein-coding unique_peak1_16_36_1.19408289534522_5.80649481330156_4.73612837605245-3 chr16 78524803 78525178 + 4.73612837605245 NA Intergenic MT2B2|LTR|ERVL -35326 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA unique_peak1_16_36_1.19408289534522_5.80649481330156_4.73612837605245-2 chr12 44221661 44222140 + 4.73612837605245 NA non-coding (NR_045113, exon 1 of 1) non-coding (NR_045113, exon 1 of 1) 544 NR_045113 100039062 Mm.490648 NR_045113 Gm2027 - nuclear assembly factor 1 homolog pseudogene pseudo unique_peak1_16_36_1.19408289534522_5.80649481330156_4.73612837605245-4 chr7 84605791 84606231 + 4.73612837605245 NA promoter-TSS (NM_010176) promoter-TSS (NM_010176) -69 NM_010176 14085 Mm.3798 NM_010176 ENSMUSG00000030630 Fah - fumarylacetoacetate hydrolase protein-coding common_peak1_130_1252_-0.274083437474987_10.1541289805844_4.73561239274327 chr7 119835163 119836940 + 4.73561239274327 NA intron (NM_001004187, intron 12 of 12) Lx5b|LINE|L1 41864 NM_001004187 434234 Mm.38237 NM_028129 ENSMUSG00000030924 2610020H08Rik - RIKEN cDNA 2610020H08 gene protein-coding common_peak1_67_612_-0.402982380343898_9.05825207351883_4.7355147091771 chr5 136135499 136136798 + 4.7355147091771 NA promoter-TSS (NM_027891) promoter-TSS (NM_027891) -74 NM_027891 71735 Mm.425292 NM_027891 ENSMUSG00000029703 Lrwd1 1200011O22Rik|AU042569|AW548074|Orca leucine-rich repeats and WD repeat domain containing 1 protein-coding common_peak2_519_5153_0.125274632032346_12.3941141378758_4.73527758181797 chr8 47672816 47676895 + 4.73527758181797 NA 5' UTR (NM_023503, exon 1 of 2) 5' UTR (NM_023503, exon 1 of 2) 304 NM_023503 69260 Mm.430733 NM_023503 ENSMUSG00000063049 Ing2 2810011M06Rik|Ing1l|Ing2b|P33ING2 inhibitor of growth family, member 2 protein-coding common_peak1_293_3141_-0.169844401043873_11.5325452647723_4.73522179213383 chr4 40721409 40723785 + 4.73522179213383 NA promoter-TSS (NR_029594) promoter-TSS (NR_029594) 129 NM_008298 15502 Mm.27897 NM_008298 ENSMUSG00000028410 Dnaja1 HSJ-2|Hsj2|Nedd7 DnaJ heat shock protein family (Hsp40) member A1 protein-coding common_peak1_18_44_1.10851110706722_6.04610864986328_4.73514048909475 chr11 54465353 54465759 + 4.73514048909475 NA intron (NM_173753, intron 1 of 17) intron (NM_173753, intron 1 of 17) 27377 NM_173753 216742 Mm.34087 NM_173753 ENSMUSG00000035992 Fnip1 A730024A03Rik|AI838773|AW557298 folliculin interacting protein 1 protein-coding unique_peak2_9_97_-1.15018792767079_6.03961588027981_4.73514048909473 chr8 55566729 55567502 + 4.73514048909473 NA Intergenic MMVL30-int|LTR|ERV1 339849 NM_175939 244486 Mm.67684 NM_175939 ENSMUSG00000046258 Adam29 - a disintegrin and metallopeptidase domain 29 protein-coding common_peak2_393_3606_0.149135220024084_11.8911513177996_4.73491915231809 chr17 48424895 48429222 + 4.73491915231809 NA intron (NM_009694, intron 1 of 2) intron (NM_009694, intron 1 of 2) 5670 NM_009694 11811 Mm.281793 NM_009694 ENSMUSG00000040694 Apobec2 Arp1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2 protein-coding common_peak2_241_2510_-0.190867157449695_11.1986127345467_4.7347757221732 chr1 161790922 161796516 + 4.7347757221732 NA Intergenic Intergenic -5224 NM_010177 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_141_938_0.284790509379599_10.0173766023436_4.73424553310418 chr17 72931636 72936367 + 4.73424553310418 NA intron (NM_029999, intron 2 of 2) intron (NM_029999, intron 2 of 2) 15696 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_28_255_-0.651336685487432_7.67433165725628_4.73420792974702 chr11 22813528 22814022 + 4.73420792974702 NA Intergenic Intergenic 45960 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak1_28_255_-0.651336685487432_7.67433165725628_4.73420792974702-2 chr7 28702246 28702754 + 4.73420792974702 NA Intergenic RLTR31C_MM|LTR|ERVK 9356 NM_001163702 233040 Mm.116116 NM_207238 ENSMUSG00000037463 Fbxo27 E130008B10Rik|FBG5|Gm161 F-box protein 27 protein-coding common_peak1_28_255_-0.651336685487432_7.67433165725628_4.73420792974702-3 chr8 39005806 39006384 + 4.73420792974702 NA exon (NM_030254, exon 1 of 8) exon (NM_030254, exon 1 of 8) 228 NM_030254 80286 Mm.272722 NM_030254 ENSMUSG00000039530 Tusc3 AU022242|BC003311|N33 tumor suppressor candidate 3 protein-coding common_peak1_30_102_0.780181677551088_7.07659136595876_4.73331173833642 chr2 29634984 29635513 + 4.73331173833642 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 15528 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_55_253_0.524492374432116_8.25093087398822_4.73307709521145 chr5 125433474 125434143 + 4.73307709521145 NA intron (NM_203319, intron 1 of 26) intron (NM_203319, intron 1 of 26) 240 NM_203319 208144 Mm.296385 NM_203319 ENSMUSG00000029480 Dhx37 Gm1050|Gm451|mKIAA1517 DEAH (Asp-Glu-Ala-His) box polypeptide 37 protein-coding common_peak2_65_322_0.468541904153312_8.56966130677058_4.73279487999819 chr8 12671531 12672849 + 4.73279487999819 NA promoter-TSS (NM_198031) promoter-TSS (NM_198031) -90 NM_198031 259279 Mm.142095 NM_198031 ENSMUSG00000000759 Tubgcp3 GCP3|Spc98p tubulin, gamma complex associated protein 3 protein-coding common_peak1_26_81_0.864655562221511_6.78987978572884_4.73256723693271 chr1 36068551 36069044 + 4.73256723693271 NA exon (NM_015818, exon 1 of 2) exon (NM_015818, exon 1 of 2) 397 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding common_peak1_26_81_0.864655562221511_6.78987978572884_4.73256723693271-2 chr15 59649887 59650485 + 4.73256723693271 NA intron (NM_144549, intron 1 of 2) intron (NM_144549, intron 1 of 2) 1532 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak1_23_212_-0.720934152133744_7.37424254415897_4.73229042613814 chr7 128238515 128239016 + 4.73229042613814 NA promoter-TSS (NM_177001) promoter-TSS (NM_177001) -734 NM_177001 100043133 Mm.183647 NM_177001 ENSMUSG00000062944 9130023H24Rik GLI4 RIKEN cDNA 9130023H24 gene protein-coding common_peak1_23_212_-0.720934152133744_7.37424254415897_4.73229042613814-2 chr9 89220382 89220924 + 4.73229042613814 NA intron (NM_026829, intron 2 of 2) intron (NM_026829, intron 2 of 2) 9463 NM_026829 107885 Mm.486274 NM_026829 ENSMUSG00000066442 Mthfs 1110034I12Rik|2310020H23Rik|AI119695 5, 10-methenyltetrahydrofolate synthetase protein-coding common_peak2_77_709_-0.372119453597827_9.28561548759313_4.73191587341025 chrX 57391792 57393571 + 4.73191587341025 NA intron (NM_001166623, intron 1 of 8) CpG 355 NM_011252 19655 Mm.28275 NM_011252 ENSMUSG00000031134 Rbmx hnRNP G RNA binding motif protein, X chromosome protein-coding common_peak1_92_858_-0.335697600250873_9.57866552101303_4.73123358868147 chr8 3355886 3357326 + 4.73123358868147 NA intron (NM_001033378, intron 1 of 10) B3A|SINE|B2 3191 NM_001033378 319493 Mm.234565 NM_001033378 ENSMUSG00000074497 A430078G23Rik - RIKEN cDNA A430078G23 gene protein-coding common_peak1_87_485_0.388209861460883_9.11891743433622_4.73123219051124 chr8 71380908 71382025 + 4.73123219051124 NA 5' UTR (NM_010150, exon 1 of 4) 5' UTR (NM_010150, exon 1 of 4) 486 NM_010150 13864 Mm.28989 NM_010150 ENSMUSG00000002393 Nr2f6 AV090102|COUP-TF3|EAR2|Erbal2 nuclear receptor subfamily 2, group F, member 6 protein-coding common_peak1_74_387_0.43023686610254_8.8150312752384_4.73118577759511 chr10 45025885 45026999 + 4.73118577759511 NA Intergenic Intergenic -40772 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak1_72_660_-0.386187435122064_9.17541274394666_4.73065412522531 chr3 89231495 89232539 + 4.73065412522531 NA exon (NM_013605, exon 6 of 7) exon (NM_013605, exon 6 of 7) 2961 NM_013605 17829 Mm.16193 NM_013605 ENSMUSG00000042784 Muc1 CD227|EMA|Muc-1 mucin 1, transmembrane protein-coding common_peak2_57_516_-0.438744844616009_8.79464804800693_4.72977646775659 chr5 129908077 129909313 + 4.72977646775659 NA exon (NM_026916, exon 1 of 3) exon (NM_026916, exon 1 of 3) 155 NM_026916 69034 Mm.211372 NM_026916 ENSMUSG00000095789 Nupr1l 1810010E01Rik|4930579G22Rik|Nupr2 nuclear protein transcriptional regulator 1 like protein-coding common_peak2_57_516_-0.438744844616009_8.79464804800693_4.72977646775659-2 chr8 122937051 122939715 + 4.72977646775659 NA intron (NR_037865, intron 2 of 13) intron (NR_037865, intron 2 of 13) 90009 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding common_peak1_57_516_-0.438744844616009_8.79464804800693_4.72977646775659 chr3 90433706 90434302 + 4.72977646775659 NA promoter-TSS (NM_178876) promoter-TSS (NM_178876) -368 NM_178876 229543 Mm.268564 NM_145540 ENSMUSG00000027933 Ints3 C77668 integrator complex subunit 3 protein-coding common_peak2_277_2292_0.185576452398164_11.2558088657799_4.7292973345743 chr4 135066798 135071494 + 4.7292973345743 NA Intergenic B4|SINE|B4 -51499 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding unique_peak1_17_40_1.14713335725458_5.93111868324538_4.72858605107843 chr2 166473214 166473751 + 4.72858605107843 NA Intergenic Intergenic 26031 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak1_17_40_1.14713335725458_5.93111868324538_4.72858605107843 chr6 72882230 72882638 + 4.72858605107843 NA intron (NM_019715, intron 1 of 6) intron (NM_019715, intron 1 of 6) 17545 NM_019715 74287 Mm.29194 NM_019715 ENSMUSG00000055239 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 protein-coding common_peak1_244_2545_-0.189034880112352_11.2194992638452_4.72820219148403 chr1 21332716 21335733 + 4.72820219148403 NA Intergenic Intergenic -15453 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_262_2131_0.192449296516285_11.1542163710173_4.72738525345985 chr19 29521786 29523859 + 4.72738525345985 NA promoter-TSS (NR_015567) promoter-TSS (NR_015567) 540 NM_001081319 226089 Mm.353838 NM_177641 ENSMUSG00000038658 Ric1 C030046E11Rik|C130057E09Rik|Kiaa1432 RAB6A GEF complex partner 1 protein-coding unique_peak2_5_66_-1.50553834473839_5.31332001808858_4.72687330272494 chr6 130429437 130430008 + 4.72687330272494 NA Intergenic Intergenic -42848 NM_016659 16627 Mm.24399 NM_016659 ENSMUSG00000079853 Klra1 A1|CH29-493D4.3|Klra22|Ly49a|Ly49o<129>|Ly49v killer cell lectin-like receptor, subfamily A, member 1 protein-coding common_peak1_123_1178_-0.283441175872744_10.0616274150434_4.72592339517348 chr5 36795795 36796887 + 4.72592339517348 NA exon (NM_026242, exon 1 of 2) exon (NM_026242, exon 1 of 2) 413 NM_026242 67568 Mm.332336 NM_026242 ENSMUSG00000055302 Mrfap1 9130413I22Rik|AL022827|Pam14 Morf4 family associated protein 1 protein-coding common_peak2_225_1746_0.211467916441999_10.8763978511378_4.72568439022181 chr2 180700849 180703189 + 4.72568439022181 NA promoter-TSS (NM_175551) promoter-TSS (NM_175551) 83 NM_011805 23856 Mm.253836 NM_011805 ENSMUSG00000038914 Dido1 6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido death inducer-obliterator 1 protein-coding common_peak1_195_1446_0.231251652751672_10.6144750329076_4.72532511325231 chr12 16893871 16895892 + 4.72532511325231 NA promoter-TSS (NM_009072) promoter-TSS (NM_009072) -97 NM_009072 19878 Mm.276024 NM_009072 ENSMUSG00000020580 Rock2 B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619 Rho-associated coiled-coil containing protein kinase 2 protein-coding unique_peak1_12_21_1.46937731481728_5.19412027604594_4.72447886971477 chr11 45872125 45872501 + 4.72447886971477 NA intron (NM_001045520, intron 1 of 11) intron (NM_001045520, intron 1 of 11) 20349 NM_001045520 216705 Mm.169673 NM_001045520 ENSMUSG00000006169 Clint1 AI642036|AW537616|C530049I24Rik|Enth|Epn4|F630206G17Rik|mKIAA0171 clathrin interactor 1 protein-coding unique_peak1_12_21_1.46937731481728_5.19412027604594_4.72447886971477-2 chr7 34988087 34988419 + 4.72447886971477 NA intron (NM_008820, intron 9 of 14) intron (NM_008820, intron 9 of 14) 68313 NM_009884 12611 Mm.273090 NM_009884 ENSMUSG00000056216 Cebpg C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP CCAAT/enhancer binding protein (C/EBP), gamma protein-coding common_peak2_235_2438_-0.193323015381646_11.1554125351054_4.72350606222107 chr8 26976132 26979627 + 4.72350606222107 NA intron (NM_001101502, intron 1 of 1) CpG 543 NM_001110508 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding common_peak1_20_53_1.02258714163503_6.26618107298098_4.72215622729437 chr5 30737171 30737618 + 4.72215622729437 NA intron (NM_023047, intron 1 of 12) intron (NM_023047, intron 1 of 12) 25499 NM_023047 65254 Mm.27732 NM_023047 ENSMUSG00000029168 Dpysl5 CRAM|CRMP-5|Crmp5 dihydropyrimidinase-like 5 protein-coding common_peak1_64_583_-0.412910038547121_8.98336953960646_4.72156186878406 chr17 34027401 34028145 + 4.72156186878406 NA TTS (NM_008202) TTS (NM_008202) 282 NM_013543 14979 Mm.275452 NM_013543 ENSMUSG00000073422 H2-Ke6 D17H6S112E|H-2Ke6|Hsd17b8|Ke-6|Ke6|Ring2 H2-K region expressed gene 6 protein-coding common_peak1_36_325_-0.568944503019667_8.06425590272124_4.72136599078329 chr7 79465571 79466269 + 4.72136599078329 NA intron (NM_017462, intron 1 of 22) CpG 353 NM_017462 18975 Mm.3616 NM_017462 ENSMUSG00000039176 Polg AA409516|PolgA polymerase (DNA directed), gamma protein-coding common_peak1_14_138_-0.93689695131216_6.65049259706743_4.72064372511474-2 chrX 50840881 50841249 + 4.72064372511474 NA promoter-TSS (NM_133729) promoter-TSS (NM_133729) -306 NM_133729 70415 Mm.46254 NM_133729 ENSMUSG00000031112 Stk26 2610018G03Rik|Mst4 serine/threonine kinase 26 protein-coding common_peak1_14_138_-0.93689695131216_6.65049259706743_4.72064372511474 chr11 97315827 97316185 + 4.72064372511474 NA intron (NM_025927, intron 1 of 7) intron (NM_025927, intron 1 of 7) 290 NM_025927 67036 Mm.5381 NM_025927 ENSMUSG00000018882 Mrpl45 2600005P05Rik|AU043542|R75241 mitochondrial ribosomal protein L45 protein-coding common_peak2_42_378_-0.520326867917142_8.30589060421252_4.72013622384294 chr11 71003524 71004644 + 4.72013622384294 NA intron (NM_178367, intron 1 of 11) CpG 348 NM_178367 216877 Mm.35399 NM_178367 ENSMUSG00000040620 Dhx33 3110057P17Rik|9430096J02Rik|Ddx33 DEAH (Asp-Glu-Ala-His) box polypeptide 33 protein-coding unique_peak2_42_378_-0.520326867917142_8.30589060421252_4.72013622384294 chr7 35753781 35755196 + 4.72013622384294 NA promoter-TSS (NM_178704) promoter-TSS (NM_178704) -34 NM_178704 233115 Mm.257808 NM_178704 ENSMUSG00000043671 Dpy19l3 6030410G08|9330164H19Rik dpy-19-like 3 (C. elegans) protein-coding common_peak2_86_797_-0.347447105556492_9.4665213834441_4.7185493103419 chr11 82869682 82871725 + 4.7185493103419 NA promoter-TSS (NM_001164570) promoter-TSS (NM_001164570) 41 NM_001164570 67338 Mm.341608 NM_026097 ENSMUSG00000020696 Rffl 1700051E09Rik|4930516L10Rik|BG080975|Carp2 ring finger and FYVE like domain containing protein protein-coding common_peak1_86_797_-0.347447105556492_9.4665213834441_4.7185493103419 chr15 97343361 97344944 + 4.7185493103419 NA intron (NM_172293, intron 3 of 5) intron (NM_172293, intron 3 of 5) -96865 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak2_159_1102_0.263754085598462_10.2390941183906_4.71853652700544 chr5 112341797 112344143 + 4.71853652700544 NA promoter-TSS (NM_027323) promoter-TSS (NM_027323) 70 NM_027323 70118 Mm.172947 NM_027323 ENSMUSG00000029346 Srrd 2810002G02Rik|Srr1 SRR1 domain containing protein-coding unique_peak2_6_74_-1.39547856285067_5.53107940907055_4.71757460358329-2 chr12 101897469 101897982 + 4.71757460358329 NA intron (NM_028446, intron 4 of 20) intron (NM_028446, intron 4 of 20) 15446 NM_028446 109181 Mm.208618 NM_028446 ENSMUSG00000021188 Trip11 2610511G22Rik|3110031G15Rik|6030460N08Rik|AI450776|GMAP-210|TRIP230 thyroid hormone receptor interactor 11 protein-coding unique_peak2_6_74_-1.39547856285067_5.53107940907055_4.71757460358329 chr12 88163822 88164453 + 4.71757460358329 NA Intergenic MMVL30-int|LTR|ERV1 17757 NM_001105254 100039315 Mm.426539 NM_001105254 ENSMUSG00000066027 Gm10436 ENSMUSG00000072907 predicted gene 10436 protein-coding common_peak1_66_329_0.464221485903908_8.59843295719777_4.7173893561532 chr1 152287914 152289042 + 4.7173893561532 NA Intergenic Intergenic 98204 NM_025677 66637 Mm.379120 NM_025677 ENSMUSG00000014980 Tsen15 5730449L18Rik|AL023077|Sen15 tRNA splicing endonuclease subunit 15 protein-coding common_peak1_279_2314_0.184486169935004_11.2690395631151_4.71677905867289 chr15 78457422 78459603 + 4.71677905867289 NA intron (NM_027902, intron 6 of 17) intron (NM_027902, intron 6 of 17) 10122 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak1_27_246_-0.661802481566752_7.6174659908013_4.71368860335469 chr14 121405518 121406129 + 4.71368860335469 NA Intergenic B3|SINE|B2 -26593 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_61_554_-0.423049445316806_8.90481923857907_4.71327080747513 chr8 71487276 71488650 + 4.71327080747513 NA promoter-TSS (NM_032544) promoter-TSS (NM_032544) -140 NM_032544 70359 Mm.142112 NM_032544 ENSMUSG00000007610 Gtpbp3 2410009F13Rik|AI607903 GTP binding protein 3 protein-coding common_peak1_138_1337_-0.263877619848859_10.253923590717_4.71288759172195 chr11 43681940 43682930 + 4.71288759172195 NA exon (NM_001164231, exon 1 of 4) exon (NM_001164231, exon 1 of 4) 437 NM_001164231 70802 Mm.397449 NM_027557 ENSMUSG00000044950 Pwwp2a 4631424J17Rik|AI891583|AU024105|D930040F23Rik PWWP domain containing 2A protein-coding common_peak2_528_6234_-0.119056254909756_12.5466457172622_4.70957601487629 chr5 23415206 23421093 + 4.70957601487629 NA Intergenic Intergenic 16204 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak1_502_4939_0.127636113453615_12.3341133831988_4.70936895959461 chr10 117842841 117846807 + 4.70936895959461 NA intron (NM_024457, intron 1 of 7) intron (NM_024457, intron 1 of 7) 1150 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak2_33_298_-0.593853102037578_7.92707512317932_4.70915067236784 chr13 75839310 75840636 + 4.70915067236784 NA promoter-TSS (NM_053108) promoter-TSS (NM_053108) 87 NM_053108 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak1_33_298_-0.593853102037578_7.92707512317932_4.70915067236784 chr1 164935194 164935801 + 4.70915067236784 NA promoter-TSS (NM_008510) promoter-TSS (NM_008510) 13 NM_008510 16963 Mm.190 NM_008510 ENSMUSG00000026573 Xcl1 AI661682|ATAC|LTN|Lptn|SCM-1|SCM-1a|Scyc1 chemokine (C motif) ligand 1 protein-coding common_peak2_131_850_0.297529248347628_9.88177994585978_4.70865127953319 chr2 130663696 130665042 + 4.70865127953319 NA intron (NM_029832, intron 1 of 8) CpG 276 NM_029832 77006 Mm.440063 NM_029832 ENSMUSG00000068290 Ddrgk1 1110001I20Rik|2600009E05Rik|AI326138|Ufbp1 DDRGK domain containing 1 protein-coding common_peak1_131_850_0.297529248347628_9.88177994585978_4.70865127953319 chr12 99406194 99408165 + 4.70865127953319 NA intron (NM_183186, intron 1 of 5) intron (NM_183186, intron 1 of 5) 42895 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak2_103_613_0.346551021643466_9.43537035619191_4.70826566499886 chr13 43201317 43203989 + 4.70826566499886 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -31152 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_55_497_-0.4468248708638_8.73658949663618_4.70764384419289 chr3 79193808 79194959 + 4.70764384419289 NA Intergenic Intergenic -18536 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak1_47_423_-0.487532675284747_8.48415411692083_4.70679426078221 chr6 87546472 87547623 + 4.70679426078221 NA Intergenic Intergenic -13788 NM_001286610 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak1_21_195_-0.754912101421257_7.23725379340458_4.70675362582929-2 chr9 89704608 89705213 + 4.70675362582929 NA exon (NM_025360, exon 1 of 3) exon (NM_025360, exon 1 of 3) 133 NM_025360 66111 Mm.27606 NM_025360 ENSMUSG00000032353 Tmed3 1200002G13Rik|AW546672|P24b transmembrane p24 trafficking protein 3 protein-coding common_peak1_21_195_-0.754912101421257_7.23725379340458_4.70675362582929 chr9 78442681 78443217 + 4.70675362582929 NA exon (NM_173386, exon 1 of 5) exon (NM_173386, exon 1 of 5) 288 NR_125721 214763 Mm.101559 NM_173386 ENSMUSG00000032344 Mb21d1 E330016A19Rik|cGAS Mab-21 domain containing 1 protein-coding common_peak1_53_240_0.535930541795989_8.18085460712796_4.70656083168523 chr19 45363840 45364591 + 4.70656083168523 NA intron (NM_009771, intron 1 of 13) intron (NM_009771, intron 1 of 13) 481 NM_001037758 12234 Mm.119717 NM_009771 ENSMUSG00000025217 Btrc Beta-Trcp1|E3RS-IkappaB|E3RSIkappaB|FWD1|Fbw1a|HOS|Slimb|b-TrCP|beta-TrCP beta-transducin repeat containing protein protein-coding common_peak2_106_637_0.341557805590904_9.48819151656032_4.70553258484131 chr8 71779257 71781198 + 4.70553258484131 NA Intergenic RLTR4_Mm|LTR|ERV1 -54546 NM_028715 74015 Mm.22025 NM_028715 ENSMUSG00000070000 Fcho1 3322402E17Rik|N28152 FCH domain only 1 protein-coding common_peak1_50_221_0.55325491077735_8.07104332173878_4.70500022603275 chr12 13248602 13249573 + 4.70500022603275 NA promoter-TSS (NM_134040) promoter-TSS (NM_134040) 87 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding common_peak1_50_221_0.55325491077735_8.07104332173878_4.70500022603275-2 chr14 64667840 64668982 + 4.70500022603275 NA intron (NM_001081177, intron 1 of 39) L1M4|LINE|L1 15880 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak1_50_221_0.55325491077735_8.07104332173878_4.70500022603275-3 chr2 118926297 118927160 + 4.70500022603275 NA exon (NM_028117, exon 1 of 1) exon (NM_028117, exon 1 of 1) 231 NM_028117 72136 Mm.486238 NM_028117 ENSMUSG00000074916 Chst14 2600016L03Rik|D4ST-1|D4st1 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 protein-coding common_peak2_50_221_0.55325491077735_8.07104332173878_4.70500022603275 chr10 75434882 75436183 + 4.70500022603275 NA intron (NM_133995, intron 6 of 9) intron (NM_133995, intron 6 of 9) -13978 NR_045841 71125 Mm.399516 NR_045841 4933407G14Rik - RIKEN cDNA 4933407G14 gene ncRNA common_peak1_135_1305_-0.267565987013191_10.2171561880398_4.70472003172617 chr17 33684349 33685471 + 4.70472003172617 NA TTS (NM_145486) TTS (NM_145486) 548 NM_001109913 76936 Mm.311439 NM_029804 ENSMUSG00000059208 Hnrnpm 2610023M21Rik|AA409009|Hnrpm|mKIAA4193 heterogeneous nuclear ribonucleoprotein M protein-coding common_peak2_181_1812_-0.225205855837755_10.7115602818253_4.70399537693328 chr19 21712701 21715217 + 4.70399537693328 NA Intergenic RLTR20D|LTR|ERVK 60650 NM_146096 226016 Mm.28796 NM_146096 ENSMUSG00000047368 Abhd17b 5730446C15Rik|Cgi67|Fam108b|Fam108b1 abhydrolase domain containing 17B protein-coding common_peak1_181_1812_-0.225205855837755_10.7115602818253_4.70399537693328 chr11 115535180 115536331 + 4.70399537693328 NA intron (NM_133354, intron 1 of 3) CpG 475 NM_133354 170930 Mm.29923 NM_133354 ENSMUSG00000020738 Sumo2 SUMO-2|Smt3A|Smt3b|Smt3h2 small ubiquitin-like modifier 2 protein-coding common_peak1_22_204_-0.741019295411936_7.30897045179948_4.70360631980149-2 chr12 108632895 108633308 + 4.70360631980149 NA intron (NM_001163395, intron 1 of 12) ORR1E-int|LTR|ERVL-MaLR -2652 NM_001163396 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774 Ena-vasodilator stimulated phosphoprotein protein-coding common_peak1_22_204_-0.741019295411936_7.30897045179948_4.70360631980149 chr1 171848956 171849484 + 4.70360631980149 NA intron (NM_001289470, intron 2 of 8) intron (NM_001289470, intron 2 of 8) 9523 NM_013489 12523 Mm.259115 NM_013489 ENSMUSG00000038147 Cd84 A130013D22Rik|CDw84|SLAMF5 CD84 antigen protein-coding common_peak1_101_948_-0.315981188707298_9.73227368266746_4.7029657677517-2 chr8 70776781 70777838 + 4.7029657677517 NA promoter-TSS (NM_008841) promoter-TSS (NM_008841) 447 NR_029440 72093 Mm.271208 NR_029440 2010320M18Rik - RIKEN cDNA 2010320M18 gene ncRNA common_peak1_101_948_-0.315981188707298_9.73227368266746_4.7029657677517 chr4 97771783 97773353 + 4.7029657677517 NA intron (NM_001122952, intron 1 of 10) (GA)n|Simple_repeat|Simple_repeat -5058 NM_001122953 18027 Mm.31274 NM_010905 ENSMUSG00000028565 Nfia 1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A nuclear factor I/A protein-coding common_peak2_133_1283_-0.269273475786223_10.1917927492292_4.70247085638729 chr9 123517562 123521384 + 4.70247085638729 NA 3' UTR (NM_013860, exon 8 of 8) 3' UTR (NM_013860, exon 8 of 8) -10409 NM_030692 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding common_peak2_295_3164_-0.168369199545225_11.5438051845431_4.70107388762344 chr19 61199372 61200494 + 4.70107388762344 NA Intergenic MURVY-LTR|LTR|ERV1 -23624 NM_001177513 633057 Mm.426097 NM_001177513 ENSMUSG00000094649 Gm7102 EG633057 predicted gene 7102 protein-coding common_peak1_19_178_-0.79268154963348_7.08747500244752_4.7009774395311-2 chr6 129609408 129609806 + 4.7009774395311 NA TTS (NM_001083322) TTS (NM_001083322) 13076 NM_033078 27007 Mm.8217 NM_033078 ENSMUSG00000030149 Klrk1 D6H12S2489E|NKG2-D|Nkg2d killer cell lectin-like receptor subfamily K, member 1 protein-coding common_peak1_19_178_-0.79268154963348_7.08747500244752_4.7009774395311 chr11 116417673 116418151 + 4.7009774395311 NA Intergenic B1F|SINE|Alu -4880 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak2_35_315_-0.572483075118079_8.01753921061806_4.70067045418944 chr14 45329709 45330643 + 4.70067045418944 NA intron (NM_025959, intron 1 of 13) intron (NM_025959, intron 1 of 13) 352 NM_025959 67089 Mm.18472 NM_025959 ENSMUSG00000021832 Psmc6 2300001E01Rik|AI451058 proteasome (prosome, macropain) 26S subunit, ATPase, 6 protein-coding common_peak1_35_315_-0.572483075118079_8.01753921061806_4.70067045418944 chr2 15049383 15049874 + 4.70067045418944 NA promoter-TSS (NM_028950) promoter-TSS (NM_028950) -316 NM_028950 74455 Mm.478923 NM_028950 ENSMUSG00000026707 Nsun6 4933403D21Rik|4933414E04Rik|NOPD1 NOL1/NOP2/Sun domain family member 6 protein-coding common_peak1_15_146_-0.903419081711196_6.74796280398077_4.69976960147589 chr10 7667574 7668022 + 4.69976960147589 NA intron (NM_145706, intron 1 of 7) intron (NM_145706, intron 1 of 7) 294 NM_145706 69912 Mm.299887 NM_145706 ENSMUSG00000040034 Nup43 2610016K01Rik|2610529I12Rik|AA409950|p42 nucleoporin 43 protein-coding unique_peak2_15_146_-0.903419081711196_6.74796280398077_4.69976960147589 chr10 68673131 68674292 + 4.69976960147589 NA Intergenic MLT1E2|LTR|ERVL-MaLR -50035 NM_177794 327766 Mm.2479 NM_177794 ENSMUSG00000060044 Tmem26 3230401A06|AI195372 transmembrane protein 26 protein-coding common_peak1_15_146_-0.903419081711196_6.74796280398077_4.69976960147589-2 chrX 107816011 107816417 + 4.69976960147589 NA promoter-TSS (NM_001163104) promoter-TSS (NM_001163104) 120 NM_025921 67028 Mm.37274 NM_025921 ENSMUSG00000031242 2610002M06Rik 8430408J07Rik|AI876413|Chmp1b2 RIKEN cDNA 2610002M06 gene protein-coding unique_peak2_30_272_-0.626074936185546_7.77971967282708_4.6989009816413 chr15 76639120 76640381 + 4.6989009816413 NA exon (NM_183091, exon 2 of 26) exon (NM_183091, exon 2 of 26) 179 NM_183091 72749 Mm.358749 NM_183091 ENSMUSG00000059323 Tonsl 2810439M11Rik|Nfkbil2 tonsoku-like, DNA repair protein protein-coding common_peak1_30_272_-0.626074936185546_7.77971967282708_4.6989009816413 chr8 36172761 36173575 + 4.6989009816413 NA Intergenic Intergenic 76348 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding common_peak1_266_2175_0.189690043667133_11.1823078630839_4.69887397512175 chr2 160645799 160647233 + 4.69887397512175 NA intron (NM_009408, intron 1 of 20) CpG 619 NM_009408 21969 Mm.217233 NM_009408 ENSMUSG00000070544 Top1 AI467334|D130064I21Rik|Top-1 topoisomerase (DNA) I protein-coding common_peak2_83_455_0.39780925200647_9.03179464016798_4.69835095259077 chr2 91202280 91203393 + 4.69835095259077 NA promoter-TSS (NM_007387) promoter-TSS (NM_007387) -76 NM_007387 11432 Mm.45570 NM_007387 ENSMUSG00000002103 Acp2 Acp-2|LAP acid phosphatase 2, lysosomal protein-coding common_peak1_130_1251_-0.272931585085745_10.1535530543897_4.69651265397073 chr4 129557863 129559499 + 4.69651265397073 NA promoter-TSS (NM_010693) promoter-TSS (NM_010693) -309 NM_010693 16818 Mm.293753 NM_010693 ENSMUSG00000000409 Lck Hck-3|Lsk|Lskt|p56|p56Lck lymphocyte protein tyrosine kinase protein-coding common_peak1_26_237_-0.672610196468349_7.55851266507377_4.69602071648667-2 chr8 120750613 120751045 + 4.69602071648667 NA intron (NM_008320, intron 6 of 8) intron (NM_008320, intron 6 of 8) 12190 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_26_237_-0.672610196468349_7.55851266507377_4.69602071648667 chrX 8892285 8893536 + 4.69602071648667 NA non-coding (NR_045448, exon 1 of 1) non-coding (NR_045448, exon 1 of 1) 557 NR_045448 102941 Mm.41588 NM_175327 ENSMUSG00000052364 B630019K06Rik AI843180 novel protein similar to F-box and leucine-rich repeat protein 17 (Fbxl17) pseudo common_peak1_26_237_-0.672610196468349_7.55851266507377_4.69602071648667 chr1 171246609 171247167 + 4.69602071648667 NA intron (NM_153064, intron 1 of 12) intron (NM_153064, intron 1 of 12) 234 NM_153064 226646 Mm.21669 NM_153064 ENSMUSG00000013593 Ndufs2 CI-49kD NADH dehydrogenase (ubiquinone) Fe-S protein 2 protein-coding common_peak1_163_1140_0.258584811149458_10.2853754818634_4.69540462763664 chr14 121345207 121347416 + 4.69540462763664 NA intron (NM_145465, intron 1 of 10) B3|SINE|B2 32919 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_110_671_0.331600744585936_9.55811779507173_4.69454552886112 chr13 55022121 55023646 + 4.69454552886112 NA Intergenic Intergenic -1498 NM_001033245 212032 Mm.267479 NM_001033245 ENSMUSG00000025877 Hk3 HK III|HK-III hexokinase 3 protein-coding common_peak2_116_721_0.321222938873975_9.65646649632416_4.6933780058709 chr3 40744628 40746561 + 4.6933780058709 NA promoter-TSS (NM_011020) promoter-TSS (NM_011020) -19 NM_011020 18415 Mm.39330 NM_011020 ENSMUSG00000025757 Hspa4l 94kDa|AI461691|APG-1|Osp94 heat shock protein 4 like protein-coding common_peak2_118_738_0.317641816093493_9.6882514621929_4.69335282449773 chr8 70000734 70003941 + 4.69335282449773 NA Intergenic Intergenic -5953 NM_145596 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak2_113_696_0.326096184868108_9.60806293830248_4.69269179703667 chr4 133872050 133874326 + 4.69269179703667 NA intron (NM_009097, intron 2 of 21) intron (NM_009097, intron 2 of 21) 1543 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak1_128_1230_-0.275753360077225_10.1277383664458_4.69202271973682 chr9 20951907 20953245 + 4.69202271973682 NA promoter-TSS (NM_001199433) promoter-TSS (NM_001199433) 47 NM_001199433 13433 Mm.128580 NM_010066 ENSMUSG00000004099 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI DNA methyltransferase (cytosine-5) 1 protein-coding common_peak2_71_649_-0.386385923670437_9.1511029460806_4.69176664494068 chr9 65214599 65216150 + 4.69176664494068 NA 5' UTR (NM_177460, exon 2 of 7) 5' UTR (NM_177460, exon 2 of 7) 684 NM_177460 214424 Mm.31129 NM_177460 ENSMUSG00000032392 Parp16 ARTD15|BC055447|C79952|PARP-16 poly (ADP-ribose) polymerase family, member 16 protein-coding unique_peak2_45_405_-0.500262801905311_8.41520451623252_4.69175839565939 chr19 57092722 57094801 + 4.69175839565939 NA intron (NM_001290813, intron 6 of 20) L1ME1|LINE|L1 25263 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_41_165_0.62904752363793_7.68956319316589_4.69149735147484 chr2 74825653 74826522 + 4.69149735147484 NA intron (NM_016804, intron 1 of 9) CpG 275 NM_016804 53375 Mm.292613 NM_016804 ENSMUSG00000027099 Mtx2 1500012G02Rik metaxin 2 protein-coding common_peak2_119_747_0.314986595082779_9.70438775742903_4.69110227483833 chr14 79556416 79559319 + 4.69110227483833 NA intron (NM_001286411, intron 2 of 8) intron (NM_001286411, intron 2 of 8) -29824 NM_026474 67955 Mm.18972 NM_026474 ENSMUSG00000022024 Sugt1 2410174K12Rik|SGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) protein-coding common_peak1_117_730_0.318411120275744_9.67293315609031_4.69054644899086 chr9 66239055 66241051 + 4.69054644899086 NA intron (NM_010019, intron 4 of 11) intron (NM_010019, intron 4 of 11) 81827 NM_010019 13143 Mm.304472 NM_010019 ENSMUSG00000032380 Dapk2 - death-associated protein kinase 2 protein-coding common_peak1_409_3798_0.144757166465078_11.9637825798976_4.69045900993535 chr4 40780635 40783104 + 4.69045900993535 NA Intergenic Intergenic -23984 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding unique_peak2_16_154_-0.872588144300066_6.8398303331242_4.68890032728072 chr9 61016005 61016894 + 4.68890032728072 NA promoter-TSS (NR_040767) promoter-TSS (NR_040767) -620 NR_040767 330956 Mm.207985 NR_040767 ENSMUSG00000111290 Gm5122 A430102L10 predicted gene 5122 ncRNA common_peak1_16_154_-0.872588144300066_6.8398303331242_4.68890032728072 chr8 111030304 111030733 + 4.68890032728072 NA intron (NM_001190786, intron 1 of 11) intron (NM_001190786, intron 1 of 11) 1233 NM_001190786 234733 Mm.482176 NM_172284 ENSMUSG00000033658 Ddx19b 2810457M08Rik|4921519L13Rik|AW260119 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b protein-coding common_peak2_109_1030_-0.301925287795838_9.85886597347019_4.68867215003997 chr15 76068694 76071139 + 4.68867215003997 NA promoter-TSS (NM_134089) promoter-TSS (NM_134089) -132 NM_001310542 105782 Mm.25568 NM_134089 ENSMUSG00000022568 Scrib AI118201|CRIB|Crc|SCRIB1|Scrb1|mKIAA0147|vartul scribbled planar cell polarity protein-coding common_peak2_53_478_-0.455061967710229_8.67635086188107_4.68838859916732 chr2 31255710 31256951 + 4.68838859916732 NA intron (NM_019681, intron 1 of 7) intron (NM_019681, intron 1 of 7) 10407 NM_019681 14299 Mm.249318 NM_019681 ENSMUSG00000062661 Ncs1 9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1 neuronal calcium sensor 1 protein-coding common_peak1_107_1010_-0.306135092690708_9.82849973555766_4.688174117831 chr9 88437908 88439317 + 4.688174117831 NA intron (NM_172926, intron 1 of 27) CpG 339 NM_172926 244962 Mm.439873 NM_172926 ENSMUSG00000032422 Snx14 B830022K16|C330035N22Rik|YR-14 sorting nexin 14 protein-coding common_peak2_122_1166_-0.283011064488639_10.047083313463_4.68658928055103 chr2 166752621 166755769 + 4.68658928055103 NA Intergenic Intergenic -39572 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding common_peak1_17_162_-0.84404279235841_6.92670675805187_4.68632609829497-2 chr5 73206737 73207171 + 4.68632609829497 NA intron (NM_028194, intron 2 of 62) intron (NM_028194, intron 2 of 62) 49664 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_17_162_-0.84404279235841_6.92670675805187_4.68632609829497 chr14 60131831 60132198 + 4.68632609829497 NA Intergenic Intergenic -45180 NM_015803 50769 Mm.319599 NM_015803 ENSMUSG00000021983 Atp8a2 AI415030|Atpc1b|agil|wl ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 protein-coding common_peak1_143_1391_-0.258421200416993_10.3137328956402_4.68621489869658 chr1 95665063 95666965 + 4.68621489869658 NA intron (NM_001159745, intron 1 of 3) intron (NM_001159745, intron 1 of 3) 1580 NM_009183 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak1_331_3614_-0.157049440297419_11.7412552116898_4.68616211205356 chr15 81521385 81523824 + 4.68616211205356 NA Intergenic Intergenic 56288 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak1_20_187_-0.77711420787914_7.16603174773807_4.68584905038442 chr18 33794901 33795271 + 4.68584905038442 NA non-coding (NR_038152, exon 1 of 2) non-coding (NR_038152, exon 1 of 2) 194 NR_038151 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA unique_peak2_20_187_-0.77711420787914_7.16603174773807_4.68584905038442 chr6 29297790 29298897 + 4.68584905038442 NA Intergenic Intergenic 17202 NM_001101486 245884 Mm.33683 NM_001101486 ENSMUSG00000079652 Fam71f2 AI507611|GARI family with sequence similarity 71, member F2 protein-coding common_peak1_63_572_-0.412913443259026_8.95593460712739_4.68559304551616-2 chr15 98933282 98934510 + 4.68559304551616 NA intron (NM_011654, intron 1 of 3) CpG 494 NM_011654 22143 Mm.392113 NM_011654 ENSMUSG00000023004 Tuba1b Tuba2 tubulin, alpha 1B protein-coding common_peak1_63_572_-0.412913443259026_8.95593460712739_4.68559304551616 chr12 104968791 104969739 + 4.68559304551616 NA exon (NM_001042699, exon 4 of 19) exon (NM_001042699, exon 4 of 19) 29412 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_368_3315_0.154484005876244_11.7724702944339_4.68500980080592 chr4 133129286 133131567 + 4.68500980080592 NA promoter-TSS (NM_153423) promoter-TSS (NM_153423) -207 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak2_275_2272_0.185437973801656_11.2431009557187_4.68407450610033 chr1 92830195 92834247 + 4.68407450610033 NA intron (NM_016696, intron 1 of 8) CpG 535 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_67_611_-0.400626959345768_9.05707436301977_4.6796986996134 chr2 167697421 167698889 + 4.6796986996134 NA TTS (NR_110334) TTS (NR_110334) 6978 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_535_5359_0.122363348363656_12.449198959527_4.67953106799336 chr11 70652644 70657120 + 4.67953106799336 NA promoter-TSS (NM_011072) promoter-TSS (NM_011072) -232 NM_011072 18643 Mm.2647 NM_011072 ENSMUSG00000018293 Pfn1 Pfn profilin 1 protein-coding unique_peak2_60_288_0.489593768546294_8.41972256677382_4.67898059779695 chr2 29715047 29717140 + 4.67898059779695 NA intron (NM_001039087, intron 12 of 25) intron (NM_001039087, intron 12 of 25) -45435 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak1_267_2186_0.189030817474343_11.1892529137853_4.67816610664071 chr9 120054133 120056876 + 4.67816610664071 NA intron (NM_009987, intron 1 of 1) ID_B1|SINE|B4 12792 NM_009987 13051 Mm.44065 NM_009987 ENSMUSG00000052336 Cx3cr1 - chemokine (C-X3-C motif) receptor 1 protein-coding unique_peak2_12_121_-1.00192840410831_6.42977313550873_4.67764633717224 chr11 70597482 70598263 + 4.67764633717224 NA intron (NM_176893, intron 2 of 31) intron (NM_176893, intron 2 of 31) -18022 NM_001145537 668433 Mm.425687 NM_001145537 ENSMUSG00000087279 4930544D05Rik - RIKEN cDNA 4930544D05 gene protein-coding common_peak2_86_478_0.388915984929673_9.09833983820102_4.6771406724676 chr6 90747609 90750639 + 4.6771406724676 NA intron (NM_001134384, intron 1 of 13) intron (NM_001134384, intron 1 of 13) -32595 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_139_1347_-0.261934444285613_10.2656375590391_4.67708065762409 chr2 132263171 132264462 + 4.67708065762409 NA intron (NM_138651, intron 1 of 12) intron (NM_138651, intron 1 of 12) 668 NM_138651 110911 Mm.284503 NM_138651 ENSMUSG00000058793 Cds2 5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 protein-coding common_peak1_72_659_-0.384003187860188_9.17432062031572_4.67692163581916 chr4 134594573 134595914 + 4.67692163581916 NA intron (NM_207237, intron 2 of 11) ORR1D2|LTR|ERVL-MaLR -27392 NR_105829 102465216 NR_105829 ENSMUSG00000099289 Mir6403 Gm27992|mmu-mir-6403 microRNA 6403 ncRNA common_peak1_85_786_-0.347880344067182_9.4462796534739_4.67672335728004 chr14 75786422 75787626 + 4.67672335728004 NA promoter-TSS (NM_026232) promoter-TSS (NM_026232) 13 NM_026232 67554 Mm.46067 NM_026232 ENSMUSG00000022003 Slc25a30 4933433D23Rik|AV025504|AV221431|AW319655|KMCP1 solute carrier family 25, member 30 protein-coding common_peak1_39_351_-0.541685079820164_8.18858907872722_4.67650070616568 chr15 102100074 102100887 + 4.67650070616568 NA Intergenic CpG -2508 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak1_32_289_-0.602589142354055_7.87861451883791_4.67648367505139 chr2 31727374 31728137 + 4.67648367505139 NA intron (NM_001283047, intron 2 of 11) MER74B|LTR|ERVL -32184 NM_009594 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak1_34_124_0.715661429861447_7.32361499959281_4.67627862011906 chr13 24524820 24525436 + 4.67627862011906 NA Intergenic Intergenic -57061 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak2_34_124_0.715661429861447_7.32361499959281_4.67627862011906 chr5 107966548 107967480 + 4.67627862011906 NA intron (NM_026062, intron 1 of 4) intron (NM_026062, intron 1 of 4) 20063 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak2_41_369_-0.527294505531458_8.26773420775058_4.67581650042306 chr2 29934746 29936174 + 4.67581650042306 NA promoter-TSS (NM_028923) promoter-TSS (NM_028923) 51 NM_028923 74412 Mm.275121 NM_028923 ENSMUSG00000019715 Gle1 4933405K21Rik|AA553313|Gle1l GLE1 RNA export mediator (yeast) protein-coding unique_peak2_29_263_-0.635737686760751_7.72652527597808_4.67243748427372 chr11 75323961 75325397 + 4.67243748427372 NA intron (NM_026653, intron 5 of 16) Lx8|LINE|L1 23704 NM_001164223 68275 Mm.102574 NM_026653 ENSMUSG00000000751 Rpa1 5031405K23Rik|70kDa|AA589576|AW557552|RF-A|RP-A|Rpa replication protein A1 protein-coding common_peak2_97_565_0.358830305265158_9.32407339546446_4.67233527816591 chr1 151979701 151982208 + 4.67233527816591 NA intron (NM_197990, intron 2 of 5) intron (NM_197990, intron 2 of 5) 109366 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak1_79_425_0.409649229777651_8.93953423511466_4.67215942770564 chr12 25138328 25139698 + 4.67215942770564 NA Intergenic Intergenic 9839 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_68_620_-0.395854137973688_9.08052238923364_4.67013500629757 chr1 136685645 136686537 + 4.67013500629757 NA intron (NR_045325, intron 1 of 2) ID|SINE|ID 2462 NR_045325 100503460 Mm.30630 NR_045324 ENSMUSG00000097113 Gm19705 - predicted gene, 19705 ncRNA common_peak2_86_796_-0.345638083324619_9.46561687232816_4.66969102561642 chr13 52792533 52794864 + 4.66969102561642 NA Intergenic Intergenic -36493 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak2_57_515_-0.435951629724329_8.79325144056109_4.66906814195147 chr4 145299654 145301876 + 4.66906814195147 NA intron (NM_009401, intron 2 of 12) intron (NM_009401, intron 2 of 12) 14382 NM_009401 21941 Mm.12810 NM_009401 ENSMUSG00000028602 Tnfrsf8 Cd30|D1S166E|Ki|Ki-1 tumor necrosis factor receptor superfamily, member 8 protein-coding common_peak1_25_77_0.870019025778683_6.72041173175159_4.66747845663938 chr6 108555120 108555626 + 4.66747845663938 NA Intergenic Intergenic 65630 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_158_1554_-0.242822583421567_10.4812875733072_4.66725035858516 chr13 3609648 3611851 + 4.66725035858516 NA intron (NM_134063, intron 1 of 19) CpG 359 NM_134063 105203 Mm.221609 NM_134063 ENSMUSG00000033799 Fam208b AI645998|Pap20|mKIAA2006 family with sequence similarity 208, member B protein-coding common_peak2_46_196_0.581079267969641_7.9125914534412_4.66542993372861 chr15 76769695 76771014 + 4.66542993372861 NA intron (NM_198420, intron 1 of 10) Lx7|LINE|L1 -46509 NM_176828 223665 Mm.291713 NM_145472 ENSMUSG00000033707 C030006K11Rik 1110033I13Rik RIKEN cDNA C030006K11 gene protein-coding common_peak1_34_306_-0.580649130846645_7.97177027994686_4.66457583091325 chr18 37954439 37955135 + 4.66457583091325 NA promoter-TSS (NM_153793) promoter-TSS (NM_153793) 201 NM_010411 15183 Mm.20521 NM_010411 ENSMUSG00000024454 Hdac3 AW537363 histone deacetylase 3 protein-coding common_peak1_34_306_-0.580649130846645_7.97177027994686_4.66457583091325-2 chr9 110457328 110457978 + 4.66457583091325 NA intron (NM_177771, intron 1 of 9) RSINE1|SINE|B4 19041 NM_177771 270201 Mm.41744 NM_177771 ENSMUSG00000054792 Klhl18 A930041K15|AW545966 kelch-like 18 protein-coding common_peak2_64_582_-0.410437552867601_8.9821332967667_4.66447435037989 chr4 101212189 101214963 + 4.66447435037989 NA intron (NM_146145, intron 1 of 24) B3|SINE|B2 51706 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_44_183_0.602616681507619_7.82487029681082_4.66441741949563 chr12 79441629 79442860 + 4.66441741949563 NA intron (NM_009014, intron 7 of 10) intron (NM_009014, intron 7 of 10) 144893 NM_001252562 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding common_peak2_44_183_0.602616681507619_7.82487029681082_4.66441741949563-2 chr7 45797825 45799183 + 4.66441741949563 NA exon (NM_001005511, exon 13 of 16) exon (NM_001005511, exon 13 of 16) 13124 NM_001290990 381983 Mm.44928 NM_001005511 ENSMUSG00000062044 Lmtk3 BC059845|aatyk3 lemur tyrosine kinase 3 protein-coding common_peak2_133_1282_-0.268149443753602_10.1912307332129_4.66398909559425 chr13 19516843 19519528 + 4.66398909559425 NA Intergenic Intergenic -13818 NR_131037 319466 NR_131037 9330199G10Rik - RIKEN cDNA 9330199G10 gene ncRNA common_peak1_98_917_-0.320895879599643_9.68190240361399_4.66386685868565 chr6 48661350 48663214 + 4.66386685868565 NA Intergenic L1VL2|LINE|L1 -13853 NM_174960 317758 Mm.116971 NM_174960 ENSMUSG00000051124 Gimap9 A630002K24|BB145400 GTPase, IMAP family member 9 protein-coding common_peak1_87_806_-0.343402498211118_9.48472361417222_4.66314751754153 chr14 54493046 54494268 + 4.66314751754153 NA Intergenic Intergenic 17557 NM_080726 140743 Mm.274727 NM_080726 ENSMUSG00000022176 Rem2 AW411893 rad and gem related GTP binding protein 2 protein-coding common_peak1_131_851_0.295834949807753_9.88262709512971_4.66140272612106 chr12 33302525 33303763 + 4.66140272612106 NA intron (NM_001033436, intron 1 of 7) intron (NM_001033436, intron 1 of 7) 629 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_46_414_-0.49383643880827_8.45004930683015_4.65875211424252 chr1 191989574 191990653 + 4.65875211424252 NA Intergenic Intergenic 8521 NR_039566 100628582 NR_039566 ENSMUSG00000093003 Mir3473c mmu-mir-3473c microRNA 3473c ncRNA common_peak1_61_295_0.483841150291713_8.45137394077481_4.65875211424252 chr10 117916111 117917190 + 4.65875211424252 NA Intergenic Intergenic -8809 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_61_295_0.483841150291713_8.45137394077481_4.65875211424252 chr3 142531453 142533769 + 4.65875211424252 NA intron (NM_001083312, intron 1 of 10) Lx4A|LINE|L1 2275 NM_145545 229900 Mm.45740 NM_145545 ENSMUSG00000040253 Gbp7 9830147J24Rik guanylate binding protein 7 protein-coding common_peak2_61_295_0.483841150291713_8.45137394077481_4.65875211424252-2 chr9 66887307 66888834 + 4.65875211424252 NA intron (NM_173413, intron 1 of 7) intron (NM_173413, intron 1 of 7) 31635 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak1_246_2567_-0.187060368650579_11.232899302797_4.65874873570402 chr10 118095243 118098609 + 4.65874873570402 NA Intergenic ORR1A1|LTR|ERVL-MaLR -44861 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding unique_peak2_25_229_-0.690068806303443_7.50045564779265_4.65759355993728-2 chr7 49778142 49779076 + 4.65759355993728 NA exon (NM_133740, exon 2 of 16) exon (NM_133740, exon 2 of 16) 251 NM_133740 71974 Mm.33202 NM_133740 ENSMUSG00000030505 Prmt3 2010005E20Rik|2410018A17Rik|AL033309|Hrmt1l3 protein arginine N-methyltransferase 3 protein-coding common_peak1_25_229_-0.690068806303443_7.50045564779265_4.65759355993728-2 chr8 71464960 71465419 + 4.65759355993728 NA intron (NM_053162, intron 1 of 1) intron (NM_053162, intron 1 of 1) 263 NM_053162 94065 Mm.29489 NM_053162 ENSMUSG00000034880 Mrpl34 0610007O17Rik|D8Bwg1484e mitochondrial ribosomal protein L34 protein-coding common_peak1_25_229_-0.690068806303443_7.50045564779265_4.65759355993728 chr5 134606655 134607248 + 4.65759355993728 NA intron (NM_022964, intron 3 of 11) PB1D9|SINE|Alu 8074 NM_022964 56743 Mm.391375 NM_020044 ENSMUSG00000040751 Lat2 AW125574|LAB|NTAL|WSCR5|Wbscr15|Wbscr5 linker for activation of T cells family, member 2 protein-coding unique_peak2_25_229_-0.690068806303443_7.50045564779265_4.65759355993728 chr17 69412273 69413610 + 4.65759355993728 NA Intergenic Intergenic -3506 NR_026848 77533 Mm.266592 NR_026848 C030034I22Rik - RIKEN cDNA C030034I22 gene ncRNA common_peak1_327_2846_0.166053420882228_11.5582534881834_4.65731613110746 chr9 113740354 113742298 + 4.65731613110746 NA promoter-TSS (NM_001114347) promoter-TSS (NM_001114347) -147 NM_001286599 76499 Mm.222272 NM_029633 ENSMUSG00000033392 Clasp2 1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627 CLIP associating protein 2 protein-coding unique_peak2_8_89_-1.21378004564336_5.88496307350799_4.65722359115713 chr2 157147362 157147972 + 4.65722359115713 NA exon (NM_011249, exon 22 of 22) exon (NM_011249, exon 22 of 22) -12445 NM_018851 56045 Mm.248478 NM_018851 ENSMUSG00000027639 Samhd1 E330031J07Rik|Mg11 SAM domain and HD domain, 1 protein-coding common_peak1_211_2154_-0.204505766160636_10.9712192708961_4.65709281421514 chr12 86834827 86836858 + 4.65709281421514 NA Intergenic (TTGG)n|Simple_repeat|Simple_repeat 48972 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_88_816_-0.341173899381495_9.50360531845494_4.65707366363108 chr10 82762987 82764005 + 4.65707366363108 NA intron (NM_010914, intron 1 of 7) CpG 645 NM_010914 18045 Mm.245998 NM_010914 ENSMUSG00000020248 Nfyb AA985999|Cbf-A nuclear transcription factor-Y beta protein-coding common_peak1_381_3468_0.150679691886769_11.8356439712298_4.65513099860969 chr14 55559211 55561379 + 4.65513099860969 NA promoter-TSS (NM_001199009) promoter-TSS (NM_001199009) 266 NM_133734 28199 Mm.11535 NM_133734 ENSMUSG00000022214 Dcaf11 0710008A13Rik|C76035|D14Ucla1|Dacf11|GLO14|Wdr23 DDB1 and CUL4 associated factor 11 protein-coding common_peak1_129_1240_-0.273760568611104_10.1404071158248_4.65316921467087 chr8 71272022 71273593 + 4.65316921467087 NA promoter-TSS (NM_015742) promoter-TSS (NM_015742) 93 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding common_peak1_81_746_-0.356908856537455_9.36651000452051_4.65312727931958 chr9 75410186 75411003 + 4.65312727931958 NA promoter-TSS (NM_015806) promoter-TSS (NM_015806) 410 NR_040719 71274 Mm.399152 NR_040719 ENSMUSG00000097021 4933433G15Rik 4921522K19Rik RIKEN cDNA 4933433G15 gene ncRNA common_peak1_65_591_-0.405521106781713_9.00669281223809_4.6529765897623 chr1 91097961 91099025 + 4.6529765897623 NA intron (NM_001310732, intron 12 of 24) intron (NM_001310732, intron 12 of 24) 45049 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_42_171_0.619462415551853_7.73599596247802_4.65202290492221 chr2 122426311 122426974 + 4.65202290492221 NA intron (NM_172980, intron 1 of 18) MT2A|LTR|ERVL 165 NM_172980 269346 Mm.29510 NM_172980 ENSMUSG00000027219 Slc28a2 2010208B10Rik|B430217P18|BB152493|Cnt2 solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 protein-coding common_peak2_75_687_-0.372675928932495_9.23992679023585_4.6516366229927 chr17 87974182 87976087 + 4.6516366229927 NA promoter-TSS (NM_010830) promoter-TSS (NM_010830) 84 NM_010830 17688 Mm.18210 NM_010830 ENSMUSG00000005370 Msh6 AU044881|AW550279|GTBP|Gtmbp mutS homolog 6 protein-coding common_peak2_28_92_0.809504503404537_6.9439110628103_4.65099251295691 chr12 25330034 25330803 + 4.65099251295691 NA Intergenic MTE2a|LTR|ERVL-MaLR 201244 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_28_92_0.809504503404537_6.9439110628103_4.65099251295691-4 chr7 46033786 46034367 + 4.65099251295691 NA intron (NM_153057, intron 1 of 30) CpG 380 NM_153057 211548 Mm.274811 NM_153057 ENSMUSG00000030835 Nomo1 D7Ertd156e|Nomo|pM5 nodal modulator 1 protein-coding common_peak2_28_92_0.809504503404537_6.9439110628103_4.65099251295691-2 chr16 50045571 50046263 + 4.65099251295691 NA non-coding (NR_045935, exon 2 of 4) non-coding (NR_045935, exon 2 of 4) 26935 NR_045935 224180 Mm.146439 NM_175010 Gm4827 B130050K08|EG224180 predicted gene 4827 ncRNA common_peak1_28_92_0.809504503404537_6.9439110628103_4.65099251295691-3 chr2 60870896 60871606 + 4.65099251295691 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 10187 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_28_92_0.809504503404537_6.9439110628103_4.65099251295691 chr16 50045579 50046254 + 4.65099251295691 NA non-coding (NR_045935, exon 2 of 4) non-coding (NR_045935, exon 2 of 4) 26936 NR_045935 224180 Mm.146439 NM_175010 Gm4827 B130050K08|EG224180 predicted gene 4827 ncRNA common_peak2_28_92_0.809504503404537_6.9439110628103_4.65099251295691-3 chr2 173678916 173679817 + 4.65099251295691 NA intron (NM_024436, intron 2 of 6) MTD|LTR|ERVL-MaLR 19521 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak1_28_92_0.809504503404537_6.9439110628103_4.65099251295691-2 chr19 46670956 46671639 + 4.65099251295691 NA intron (NM_007809, intron 1 of 7) intron (NM_007809, intron 1 of 7) 1703 NM_007809 13074 Mm.1262 NM_007809 ENSMUSG00000003555 Cyp17a1 Cyp17|p450c17 cytochrome P450, family 17, subfamily a, polypeptide 1 protein-coding common_peak2_49_215_0.557740001159273_8.0337575027431_4.65050831030774 chr9 66794952 66796098 + 4.65050831030774 NA promoter-TSS (NM_177583) promoter-TSS (NM_177583) -102 NM_177583 208117 Mm.41291 NM_177583 ENSMUSG00000032375 Aph1b 2310057K14Rik|Aph1c aph1 homolog B, gamma secretase subunit protein-coding common_peak1_38_341_-0.544909065278037_8.14539798224688_4.65002067633084 chr1 74284268 74284623 + 4.65002067633084 NA promoter-TSS (NM_001039509) promoter-TSS (NM_001039509) 293 NM_146110 227290 Mm.379371 NM_146110 ENSMUSG00000006299 Aamp AU040907|Aamp-rs angio-associated migratory protein protein-coding common_peak1_52_234_0.539224818878113_8.14612935600406_4.65002067633084 chr3 59259936 59260715 + 4.65002067633084 NA intron (NM_177855, intron 31 of 43) intron (NM_177855, intron 31 of 43) 2506 NM_027571 70839 Mm.422675 NM_027571 ENSMUSG00000036353 P2ry12 2900079B22Rik|4921504D23Rik|P2Y12 purinergic receptor P2Y, G-protein coupled 12 protein-coding unique_peak2_52_234_0.539224818878113_8.14612935600406_4.65002067633084 chr1 128781630 128783534 + 4.65002067633084 NA Intergenic Intergenic -190283 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_38_341_-0.544909065278037_8.14539798224688_4.65002067633084-2 chr5 124021867 124022628 + 4.65002067633084 NA intron (NM_177876, intron 1 of 3) PB1|SINE|Alu 10013 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_42_377_-0.516515253967121_8.30398479723751_4.64938601593354 chr11 93968475 93969152 + 4.64938601593354 NA promoter-TSS (NM_008704) promoter-TSS (NM_008704) -292 NM_008704 18102 Mm.439702 NM_008704 ENSMUSG00000037601 Nme1 AL024257|NDPK-A|NM23-M1|NM23A NME/NM23 nucleoside diphosphate kinase 1 protein-coding common_peak1_338_2971_0.162435613787089_11.6184362074321_4.64921095987137 chr10 83003426 83006590 + 4.64921095987137 NA intron (NM_021439, intron 1 of 2) intron (NM_021439, intron 1 of 2) 19511 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_125_1197_-0.278190721650647_10.0873168319635_4.64873055594096 chr6 113667958 113669942 + 4.64873055594096 NA intron (NM_172161, intron 3 of 12) intron (NM_172161, intron 3 of 12) -28549 NM_001033463 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak1_24_72_0.896190633256366_6.6379198755082_4.64732670291859-2 chr4 115830168 115830692 + 4.64732670291859 NA intron (NM_175308, intron 1 of 3) intron (NM_175308, intron 1 of 3) 2338 NM_175308 100465 Mm.35571 NM_175308 ENSMUSG00000028709 Mob3c AW822253|D130076I06Rik|Mobkl2c MOB kinase activator 3C protein-coding common_peak1_24_72_0.896190633256366_6.6379198755082_4.64732670291859-3 chr5 139060170 139060724 + 4.64732670291859 NA intron (NM_001253890, intron 6 of 10) intron (NM_001253890, intron 6 of 10) -65494 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak1_24_72_0.896190633256366_6.6379198755082_4.64732670291859 chr1 43143012 43143530 + 4.64732670291859 NA intron (NM_001289533, intron 2 of 5) intron (NM_001289533, intron 2 of 5) 20690 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak1_24_72_0.896190633256366_6.6379198755082_4.64732670291859 chr10 108172952 108173508 + 4.64732670291859 NA intron (NM_027892, intron 1 of 25) B4A|SINE|B4 10830 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding unique_peak2_31_108_0.754681249534598_7.14552494954422_4.64624113295365 chr1 181872940 181873774 + 4.64624113295365 NA Intergenic Intergenic -30956 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_55_496_-0.443924980358005_8.73513955138328_4.64594992650651 chr11 35833693 35834521 + 4.64594992650651 NA intron (NM_025936, intron 1 of 14) intron (NM_025936, intron 1 of 14) 421 NM_025936 104458 Mm.284906 NM_025936 ENSMUSG00000018848 Rars 2610011N19Rik|2610037E21Rik|AL033339|AW985894 arginyl-tRNA synthetase protein-coding common_peak1_188_1889_-0.218426843003369_10.7749570976068_4.64593750416082 chr18 39136804 39138877 + 4.64593750416082 NA intron (NM_175164, intron 10 of 22) intron (NM_175164, intron 10 of 22) 144695 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_24_220_-0.701887367255048_7.43695887576391_4.64579049293273 chr13 113095845 113096395 + 4.64579049293273 NA intron (NM_010370, intron 3 of 4) intron (NM_010370, intron 3 of 4) 4861 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak1_24_220_-0.701887367255048_7.43695887576391_4.64579049293273-2 chr7 66150895 66151527 + 4.64579049293273 NA intron (NM_001081163, intron 2 of 2) intron (NM_001081163, intron 2 of 2) 41696 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_36_136_0.681751568250884_7.43890786708597_4.64579049293273 chr8 57799692 57800598 + 4.64579049293273 NA intron (NM_175032, intron 10 of 11) intron (NM_175032, intron 10 of 11) -147090 NM_144731 108150 Mm.62886 NM_144731 ENSMUSG00000031608 Galnt7 AI225872 UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 protein-coding common_peak1_108_1019_-0.302611201329222_9.84304783619425_4.64523980433558 chr15 98533329 98534495 + 4.64523980433558 NA 5' UTR (NM_133714, exon 1 of 10) 5' UTR (NM_133714, exon 1 of 10) 357 NM_001289438 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding common_peak2_36_324_-0.564512256704406_8.06203977956361_4.64511928888759-2 chr7 38084316 38086192 + 4.64511928888759 NA Intergenic CpG 22236 NM_007633 12447 Mm.16110 NM_007633 ENSMUSG00000002068 Ccne1 AW538188|CycE1 cyclin E1 protein-coding common_peak2_36_324_-0.564512256704406_8.06203977956361_4.64511928888759 chr13 95719207 95720303 + 4.64511928888759 NA intron (NM_027711, intron 11 of 35) intron (NM_027711, intron 11 of 35) 22835 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding unique_peak2_36_324_-0.564512256704406_8.06203977956361_4.64511928888759 chr11 98932416 98934277 + 4.64511928888759 NA Intergenic Intergenic -4350 NM_009024 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_36_324_-0.564512256704406_8.06203977956361_4.64511928888759 chr11 5878231 5878914 + 4.64511928888759 NA promoter-TSS (NM_008894) promoter-TSS (NM_008894) -316 NM_008894 18972 Mm.35788 NM_008894 ENSMUSG00000020471 Pold2 50kDa|p50|po1D2 polymerase (DNA directed), delta 2, regulatory subunit protein-coding common_peak2_82_448_0.398934234427202_9.01003875195475_4.64455326660957 chr4 45107080 45108780 + 4.64455326660957 NA exon (NM_001134646, exon 1 of 3) exon (NM_001134646, exon 1 of 3) 183 NM_001134646 68512 Mm.282081 NM_001099675 ENSMUSG00000078713 Tomm5 1110019J04Rik|Tom5 translocase of outer mitochondrial membrane 5 homolog (yeast) protein-coding common_peak2_112_1060_-0.295689442742365_9.90336421954358_4.64428207733207 chr2 69897000 69898881 + 4.64428207733207 NA intron (NM_001303033, intron 1 of 38) intron (NM_001303033, intron 1 of 38) 694 NM_177783 68795 Mm.314576 NM_177783 ENSMUSG00000044308 Ubr3 1110059H15Rik|4833421P10Rik|A130030D10Rik|AA409735|AA414972|AA422631|AI646861|AU016126|Zfp650|Znf650 ubiquitin protein ligase E3 component n-recognin 3 protein-coding common_peak1_116_1102_-0.290139109830237_9.96214752067626_4.64253006629042 chr9 21247838 21249228 + 4.64253006629042 NA promoter-TSS (NM_053190) promoter-TSS (NM_053190) -90 NM_053190 94226 Mm.190619 NM_053190 ENSMUSG00000045087 S1pr5 Edg8|S1P5|lpB4 sphingosine-1-phosphate receptor 5 protein-coding common_peak2_152_1040_0.268050939981324_10.1577798232901_4.64233296523832 chr12 54861737 54863669 + 4.64233296523832 NA intron (NM_007688, intron 1 of 3) CpG 174 NM_007688 12632 Mm.276826 NM_007688 ENSMUSG00000062929 Cfl2 - cofilin 2, muscle protein-coding unique_peak2_66_600_-0.400677480561463_9.03088244043045_4.64226621677072 chr16 49906277 49909181 + 4.64226621677072 NA intron (NM_010581, intron 9 of 9) intron (NM_010581, intron 9 of 9) 52075 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_66_600_-0.400677480561463_9.03088244043045_4.64226621677072 chr18 40218621 40219987 + 4.64226621677072 NA promoter-TSS (NM_023311) promoter-TSS (NM_023311) 95 NM_023311 67180 Mm.270382 NM_023311 ENSMUSG00000024487 Yipf5 2610311I19Rik|AA408236|Yip1a Yip1 domain family, member 5 protein-coding common_peak1_58_525_-0.433392584250477_8.82222269716706_4.64200598586887 chr19 21897003 21898065 + 4.64200598586887 NA Intergenic Intergenic 119194 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_58_275_0.497001948263657_8.35702543091_4.64127052930405 chr7 127042263 127042981 + 4.64127052930405 NA promoter-TSS (NM_145588) promoter-TSS (NM_145588) -202 NM_145588 110033 Mm.286488 NM_145588 ENSMUSG00000030677 Kif22 AU021460|C81217|Kid|Kif22a kinesin family member 22 protein-coding common_peak1_360_3224_0.155840943216058_11.733003916806_4.64039348681806 chr15 80012015 80015570 + 4.64039348681806 NA intron (NM_011057, intron 1 of 6) CpG 1016 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak1_62_302_0.478435176478831_8.48239157171237_4.63997600853818 chr6 129611760 129613029 + 4.63997600853818 NA 3' UTR (NM_001083322, exon 8 of 8) 3' UTR (NM_001083322, exon 8 of 8) 10289 NM_033078 27007 Mm.8217 NM_033078 ENSMUSG00000030149 Klrk1 D6H12S2489E|NKG2-D|Nkg2d killer cell lectin-like receptor subfamily K, member 1 protein-coding common_peak2_62_302_0.478435176478831_8.48239157171237_4.63997600853818 chr1 156473582 156474818 + 4.63997600853818 NA 5' UTR (NM_009230, exon 1 of 16) 5' UTR (NM_009230, exon 1 of 16) 128 NM_009230 20652 Mm.28099 NM_009230 ENSMUSG00000026600 Soat1 8430426K15Rik|ACAT-1|AW550831|Acact|ald|hid sterol O-acyltransferase 1 protein-coding common_peak2_300_3224_-0.165820165678559_11.5721733623587_4.63997147137334 chr19 6362411 6365168 + 4.63997147137334 NA promoter-TSS (NM_001110791) promoter-TSS (NM_001110791) 99 NR_122118 22668 Mm.256422 NM_011750 ENSMUSG00000024949 Sf1 BBP|MZFM|WBP4|Zfp162 splicing factor 1 protein-coding common_peak1_47_202_0.575051862093275_7.95286184823181_4.63823084304321 chr17 17838410 17839222 + 4.63823084304321 NA intron (NM_001162909, intron 8 of 8) intron (NM_001162909, intron 8 of 8) 7841 NM_001162909 75202 Mm.227456 NM_029205 ENSMUSG00000080316 Spaca6 4930546H06Rik|9530079D04Rik|B230206P06Rik|Ncrna00085|SPACA6A|let-7e|mir-125a|mir-99b sperm acrosome associated 6 protein-coding common_peak1_23_211_-0.714144986471104_7.37084796132765_4.63806742346703-2 chr6 28486275 28486823 + 4.63806742346703 NA intron (NM_019776, intron 1 of 23) PB1D11|SINE|Alu 6201 NM_019776 56463 Mm.439987 NM_019776 ENSMUSG00000001424 Snd1 AL033314|Tudor-SN staphylococcal nuclease and tudor domain containing 1 protein-coding common_peak1_23_211_-0.714144986471104_7.37084796132765_4.63806742346703 chr13 23752223 23752709 + 4.63806742346703 NA promoter-TSS (NM_178203) promoter-TSS (NM_178203) 86 NM_178203 319150 NM_178203 ENSMUSG00000069267 Hist1h3b H3-53 histone cluster 1, H3b protein-coding common_peak2_351_3120_0.158454345520164_11.6870198146793_4.63659034682475 chr11 115474752 115479231 + 4.63659034682475 NA intron (NM_177778, intron 2 of 2) intron (NM_177778, intron 2 of 2) 1314 NM_177778 276905 Mm.38019 NM_177778 ENSMUSG00000057219 Armc7 A630084C13|BC023126 armadillo repeat containing 7 protein-coding common_peak1_276_2928_-0.173972428831837_11.4292062634634_4.63652380786528 chr15 78570255 78573520 + 4.63652380786528 NA intron (NM_009008, intron 1 of 6) intron (NM_009008, intron 1 of 6) 896 NM_009008 19354 Mm.1972 NM_009008 ENSMUSG00000033220 Rac2 AI323801|AI452260 RAS-related C3 botulinum substrate 2 protein-coding common_peak1_71_366_0.438273731402166_8.7387731185443_4.63580200627441 chr5 150522121 150523167 + 4.63580200627441 NA promoter-TSS (NM_009765) promoter-TSS (NM_009765) 23 NM_001081001 12190 Mm.236256 NM_009765 ENSMUSG00000041147 Brca2 Fancd1|RAB163 breast cancer 2, early onset protein-coding unique_peak2_13_129_-0.962415374196884_6.54116012593001_4.63380356949352 chr10 19529301 19530401 + 4.63380356949352 NA Intergenic Intergenic -62107 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_23_67_0.926312626841756_6.55061915467122_4.6338035694935 chr5 107977611 107978144 + 4.6338035694935 NA intron (NM_026062, intron 1 of 4) ORR1B2|LTR|ERVL-MaLR 9200 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_595_6140_0.113891736735766_12.6412037561124_4.63363729103425 chr2 25192942 25197523 + 4.63363729103425 NA exon (NM_146115, exon 2 of 2) exon (NM_146115, exon 2 of 2) 1581 NM_146115 227612 Mm.119747 NM_146115 ENSMUSG00000059555 Tor4a A830007P12Rik torsin family 4, member A protein-coding common_peak2_315_3411_-0.161078217832262_11.6558628224022_4.63347051360949 chr7 127023666 127028658 + 4.63347051360949 NA intron (NM_010772, intron 1 of 4) intron (NM_010772, intron 1 of 4) 317 NM_010772 17188 Mm.378964 NM_010772 ENSMUSG00000030678 Maz MAZI|PUR1|Pur-1|SAF-1|SAF-2 MYC-associated zinc finger protein (purine-binding transcription factor) protein-coding common_peak2_192_1419_0.231130078054214_10.5872402534192_4.63344623222836 chr19 4153678 4157350 + 4.63344623222836 NA intron (NM_016933, intron 1 of 1) intron (NM_016933, intron 1 of 1) 868 NM_016933 19265 Mm.271937 NM_016933 ENSMUSG00000045826 Ptprcap AI605264|CD-45-AP|LPAP|LSM-1 protein tyrosine phosphatase, receptor type, C polypeptide-associated protein protein-coding unique_peak2_10_105_-1.0947350230556_6.1805529430354_4.63264272633028-5 chr9 63688015 63688986 + 4.63264272633028 NA intron (NM_016769, intron 1 of 8) MTEa|LTR|ERVL-MaLR 69494 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak2_10_105_-1.0947350230556_6.1805529430354_4.63264272633028-4 chr7 31065934 31066561 + 4.63264272633028 NA intron (NM_144556, intron 6 of 8) ZP3AR|Satellite|Satellite 6312 NM_144556 243914 Mm.389870 NM_144556 ENSMUSG00000036560 Lgi4 Lgil3|clp leucine-rich repeat LGI family, member 4 protein-coding unique_peak2_10_105_-1.0947350230556_6.1805529430354_4.63264272633028 chr16 32732254 32733194 + 4.63264272633028 NA Intergenic Intergenic -3162 NM_080457 140474 Mm.214599 NM_080457 ENSMUSG00000079620 Muc4 4933405I11Rik|Asgp mucin 4 protein-coding unique_peak2_10_105_-1.0947350230556_6.1805529430354_4.63264272633028-2 chr4 46559995 46560947 + 4.63264272633028 NA intron (NM_001164804, intron 2 of 11) intron (NM_001164804, intron 2 of 11) 5969 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding unique_peak2_10_105_-1.0947350230556_6.1805529430354_4.63264272633028-3 chr4 146503431 146504243 + 4.63264272633028 NA intron (NM_001243138, intron 1 of 4) MuLV-int|LTR|ERV1 1837 NM_001243138 100041433 Mm.441741 NM_001243138 ENSMUSG00000056300 Zfp981 Gm13247|OTTMUSG00000011075 zinc finger protein 981 protein-coding common_peak1_166_1642_-0.235370159262114_10.564431685319_4.63127379974861 chr4 133756318 133757680 + 4.63127379974861 NA Intergenic Intergenic -3388 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding common_peak2_481_4680_0.12986275672905_12.2575324280765_4.63046705998149 chr1 171387765 171392036 + 4.63046705998149 NA intron (NM_001005508, intron 1 of 11) intron (NM_001005508, intron 1 of 11) 940 NM_001005508 226652 Mm.251048 NM_001005508 ENSMUSG00000048865 Arhgap30 6030405P05Rik|Gm102|mFLJ00267 Rho GTPase activating protein 30 protein-coding common_peak1_33_297_-0.589019948301635_7.92465854631134_4.62967749621338 chr16 97310646 97311319 + 4.62967749621338 NA Intergenic ERVB5_2-LTR_MM|LTR|ERVK -45746 NM_019517 56175 Mm.97885 NM_019517 ENSMUSG00000040605 Bace2 1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP1|ASP21|BAE2|CDA13|CEAP1|DRAP beta-site APP-cleaving enzyme 2 protein-coding unique_peak2_33_297_-0.589019948301635_7.92465854631134_4.62967749621338 chr8 14984663 14986214 + 4.62967749621338 NA intron (NM_172751, intron 26 of 28) intron (NM_172751, intron 26 of 28) -25587 NM_029116 74901 Mm.46675 NM_029116 ENSMUSG00000055675 Kbtbd11 2900016B01Rik|4930465M17Rik|mKIAA0711 kelch repeat and BTB (POZ) domain containing 11 protein-coding common_peak1_94_876_-0.32796324216952_9.61245141135997_4.62953696805426 chr12 111039266 111040229 + 4.62953696805426 NA promoter-TSS (NM_198023) promoter-TSS (NM_198023) -51 NM_198023 217864 Mm.23808 NM_198023 ENSMUSG00000037896 Rcor1 5730409O11|6720480E22Rik|AU042633|D12Wsu95e|Rocr1|mKIAA0071 REST corepressor 1 protein-coding common_peak2_257_2698_-0.181735263873263_11.3073416295302_4.62816126961849 chr2 156188741 156191570 + 4.62816126961849 NA Intergenic B2_Mm2|SINE|B2 -6492 NM_172674 228829 Mm.427078 NM_172674 ENSMUSG00000038116 Phf20 6820402O20Rik PHD finger protein 20 protein-coding common_peak1_27_245_-0.655949755321314_7.61453962767858_4.62629284883381 chr11 32564547 32565197 + 4.62629284883381 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 31606 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_35_314_-0.567910345328256_8.01525284572315_4.62341830193598 chr12 113146126 113146897 + 4.62341830193598 NA Intergenic Intergenic -5501 NM_007763 12925 Mm.272368 NM_007763 ENSMUSG00000006360 Crip1 CRHP|CRP1|Crip cysteine-rich protein 1 (intestinal) protein-coding common_peak1_35_314_-0.567910345328256_8.01525284572315_4.62341830193598-2 chr7 126487285 126487981 + 4.62341830193598 NA exon (NM_001163713, exon 2 of 9) exon (NM_001163713, exon 2 of 9) 278 NM_001163713 233870 Mm.197829 NM_172745 ENSMUSG00000073838 Tufm 2300002G02Rik|C76308|C76389|EF-TuMT|EFTU Tu translation elongation factor, mitochondrial protein-coding common_peak1_134_878_0.290593798574511_9.92501625443066_4.62341442229371 chr15 59373783 59374852 + 4.62341442229371 NA promoter-TSS (NM_153548) promoter-TSS (NM_153548) 119 NM_001164604 68501 Mm.27762 NM_026746 ENSMUSG00000059586 Nsmce2 1110014D18Rik|AI661537 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase protein-coding unique_peak1_13_25_1.35951272069048_5.38019607848633_4.62282147871545 chr15 84893778 84894143 + 4.62282147871545 NA Intergenic RLTR44C|LTR|ERVK -29468 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak1_13_25_1.35951272069048_5.38019607848633_4.62282147871545 chr14 121406820 121407188 + 4.62282147871545 NA Intergenic Intergenic -27774 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_33_119_0.723257976552008_7.26851958388452_4.62154857561315 chr8 116587786 116588461 + 4.62154857561315 NA intron (NM_029441, intron 4 of 6) intron (NM_029441, intron 4 of 6) 83108 NM_029297 75465 Mm.23114 NM_029297 ENSMUSG00000034467 Dynlrb2 1700009A04Rik|DNLC2B|Dncl2b dynein light chain roadblock-type 2 protein-coding common_peak1_288_2415_0.178863764243522_11.3278366214468_4.62145872036379 chr1 91064496 91068081 + 4.62145872036379 NA intron (NM_001310732, intron 1 of 24) intron (NM_001310732, intron 1 of 24) 12844 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_86_795_-0.343826789877797_9.46471122560475_4.62107314068967 chr2 122737755 122739500 + 4.62107314068967 NA exon (NM_019788, exon 1 of 5) exon (NM_019788, exon 1 of 5) 122 NM_019788 18457 Mm.268921 NM_019788 ENSMUSG00000005804 Bloc1s6 BLOC-1|Pldn|Stx13bp1|pa biogenesis of lysosomal organelles complex-1, subunit 6, pallidin protein-coding common_peak1_97_906_-0.321470192431482_9.66422364431278_4.62082463282329 chr15 80133008 80134080 + 4.62082463282329 NA intron (NM_025609, intron 1 of 10) CpG 390 NM_025609 66513 Mm.288245 NM_025609 ENSMUSG00000022414 Tab1 2310012M03Rik|Map3k7ip1|b2b449Clo TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding common_peak1_56_261_0.511075718012723_8.28896086054381_4.62002442954149 chr11 116379804 116380943 + 4.62002442954149 NA intron (NM_027258, intron 2 of 18) intron (NM_027258, intron 2 of 18) 32659 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_178_1284_0.241991941341528_10.448548614752_4.6193439243646 chr6 124414119 124415925 + 4.6193439243646 NA promoter-TSS (NM_008995) promoter-TSS (NM_008995) 45 NM_008995 19305 Mm.22418 NM_008995 ENSMUSG00000005069 Pex5 AW212715|ESTM1|PTS1R|Pxr1|X83306 peroxisomal biogenesis factor 5 protein-coding common_peak2_78_418_0.411292657413965_8.91645276240633_4.61880495570412 chr5 115542375 115544238 + 4.61880495570412 NA intron (NM_011223, intron 1 of 10) MIRb|SINE|MIR -16161 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak2_67_338_0.451619420210539_8.63095117324161_4.61743082558956 chr2 104815609 104817458 + 4.61743082558956 NA intron (NM_001123327, intron 1 of 11) CpG 163 NM_001123327 99003 Mm.274314 NM_001123327 ENSMUSG00000074994 Qser1 4732486I23Rik|AI502974 glutamine and serine rich 1 protein-coding common_peak1_30_271_-0.620780636516033_7.77707252299232_4.61586375496276 chr8 120755955 120756687 + 4.61586375496276 NA 3' UTR (NM_001301811, exon 9 of 9) 3' UTR (NM_001301811, exon 9 of 9) 17682 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_68_619_-0.393529085027444_9.07935986276052_4.61508747192891 chr10 12874070 12874953 + 4.61508747192891 NA Intergenic Intergenic -12776 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_68_619_-0.393529085027444_9.07935986276052_4.61508747192891 chr11 43747018 43748580 + 4.61508747192891 NA intron (NM_133795, intron 1 of 7) CpG 174 NM_133795 66827 Mm.271974 NM_133795 ENSMUSG00000041278 Ttc1 4833412C19Rik|C79328|TPR1 tetratricopeptide repeat domain 1 protein-coding common_peak1_27_87_0.827133131380628_6.87299818432761_4.61460677873737 chr11 46396192 46396640 + 4.61460677873737 NA intron (NR_105955, intron 2 of 4) intron (NR_105955, intron 2 of 4) -6901 NM_001281965 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding common_peak1_45_190_0.587644287244117_7.87125097165781_4.61435966894186 chr9 95120247 95120982 + 4.61435966894186 NA intron (NM_177909, intron 12 of 15) intron (NM_177909, intron 12 of 15) 286656 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak1_322_2792_0.166496587711368_11.5308481521356_4.61374039967514 chr13 60894834 60898346 + 4.61374039967514 NA intron (NM_001145801, intron 2 of 3) intron (NM_001145801, intron 2 of 3) 857 NM_007797 13025 Mm.30144 NM_007797 ENSMUSG00000074874 Ctla2b AW545568|Ctla-2b cytotoxic T lymphocyte-associated protein 2 beta protein-coding common_peak1_101_946_-0.312937527154572_9.7307518518911_4.61369005571485 chr10 59980377 59982009 + 4.61369005571485 NA Intergenic Intergenic -21612 NM_026937 69090 Mm.155839 NM_026937 ENSMUSG00000044475 Ascc1 1810015P09Rik|AI550520|ASC1p50|CGI-18 activating signal cointegrator 1 complex subunit 1 protein-coding common_peak2_35_130_0.697874671521573_7.38236033729824_4.61219855833147 chr13 73748920 73749890 + 4.61219855833147 NA Intergenic Intergenic -14292 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding unique_peak2_11_112_-1.03301580550945_6.30367105966046_4.61175505114611-2 chr13 92244329 92245250 + 4.61175505114611 NA intron (NM_010829, intron 19 of 23) intron (NM_010829, intron 19 of 23) -109994 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding unique_peak2_11_112_-1.03301580550945_6.30367105966046_4.61175505114611 chr10 18531166 18532195 + 4.61175505114611 NA exon (NM_173390, exon 7 of 7) exon (NM_173390, exon 7 of 7) 14396 NM_019487 56016 Mm.35551 NM_019487 ENSMUSG00000019853 Hebp2 SOUL heme binding protein 2 protein-coding unique_peak2_11_112_-1.03301580550945_6.30367105966046_4.61175505114611-3 chr6 71048420 71049069 + 4.61175505114611 NA Intergenic Intergenic 92138 NM_001101464 232077 Mm.297656 NM_001101464 ENSMUSG00000055874 Foxi3 - forkhead box I3 protein-coding common_peak2_43_386_-0.509779702264103_8.34129990501236_4.61157064518052 chr5 34265742 34267111 + 4.61157064518052 NA intron (NM_001015039, intron 1 of 12) intron (NM_001015039, intron 1 of 12) 21898 NM_001015039 231125 Mm.113388 NM_001015039 ENSMUSG00000037224 Zfyve28 9630058O20Rik|Gm146|mKIAA1643 zinc finger, FYVE domain containing 28 protein-coding common_peak2_37_332_-0.552401852488015_8.10317744082725_4.60931033589774 chrX 164026561 164028221 + 4.60931033589774 NA intron (NM_181315, intron 1 of 7) intron (NM_181315, intron 1 of 7) 619 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak1_37_332_-0.552401852488015_8.10317744082725_4.60931033589774 chr15 76538158 76538809 + 4.60931033589774 NA promoter-TSS (NM_029643) promoter-TSS (NM_029643) 263 NM_013909 30840 Mm.275279 NM_013909 ENSMUSG00000022559 Fbxl6 AU021795|Fbl6 F-box and leucine-rich repeat protein 6 protein-coding common_peak1_37_332_-0.552401852488015_8.10317744082725_4.60931033589774-2 chr4 43972476 43973198 + 4.60931033589774 NA intron (NM_027450, intron 4 of 4) intron (NM_027450, intron 4 of 4) -10667 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding unique_peak2_21_194_-0.747532571055659_7.23356402822178_4.60886591965997 chr12 26400956 26402011 + 4.60886591965997 NA intron (NM_080563, intron 1 of 8) ORR1A4|LTR|ERVL-MaLR 13527 NR_105856 102466676 NR_105856 ENSMUSG00000098771 Mir6538 Gm27439|mmu-mir-6538 microRNA 6538 ncRNA common_peak2_208_2118_-0.205422255847427_10.9464567444485_4.60805387254867 chr11 4592921 4595699 + 4.60805387254867 NA intron (NM_028860, intron 1 of 17) CpG 505 NM_028860 74302 Mm.425669 NM_028860 ENSMUSG00000034354 Mtmr3 1700092A20Rik|AI255150|AW557713|FYVE-DSP1|ZFYVE10|mKIAA0371 myotubularin related protein 3 protein-coding common_peak2_402_3718_0.144988087197152_11.9331930762106_4.60796600098565 chr16 44138073 44141358 + 4.60796600098565 NA promoter-TSS (NM_028108) promoter-TSS (NM_028108) -94 NM_028108 72117 Mm.278726 NM_028108 ENSMUSG00000022698 Naa50 2600005K24Rik|2810441M03Rik|AW112078|Mak3|Mak3p|Nat13|Nat5|San N(alpha)-acetyltransferase 50, NatE catalytic subunit protein-coding common_peak1_22_203_-0.733964537877985_7.3054430730325_4.60789536340183 chr15 12216613 12217259 + 4.60789536340183 NA intron (NM_172958, intron 1 of 15) intron (NM_172958, intron 1 of 15) 11842 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak1_26_236_-0.666535682058664_7.55547540786893_4.60718415989784 chr9 111046382 111046886 + 4.60718415989784 NA Intergenic B3|SINE|B2 10610 NM_001302377 54199 Mm.7336 NM_017466 ENSMUSG00000043953 Ccrl2 1810047I05Rik|Ackr5|CCR11|Cmkbr1l2|E01|L-CCR chemokine (C-C motif) receptor-like 2 protein-coding common_peak1_87_487_0.382285027503777_9.12187985131477_4.60657850861624 chr13 30932740 30933847 + 4.60657850861624 NA intron (NM_025588, intron 4 of 27) MTC|LTR|ERVL-MaLR 14468 NM_153072 210554 Mm.450571 NM_153072 ENSMUSG00000076430 Hus1b - HUS1 checkpoint clamp component B protein-coding common_peak2_105_987_-0.30601315495521_9.79536065410707_4.60623077753134 chr5 52863446 52867307 + 4.60623077753134 NA intron (NM_024213, intron 26 of 27) PB1|SINE|Alu 31241 NM_024213 52206 Mm.272568 NM_024213 ENSMUSG00000029176 Anapc4 2610306D21Rik|APC4|D5Ertd249e anaphase promoting complex subunit 4 protein-coding common_peak1_250_2613_-0.184245944981434_11.2599204533047_4.60550822659706 chr10 63022610 63024797 + 4.60550822659706 NA promoter-TSS (NM_026085) promoter-TSS (NM_026085) 146 NM_001079824 432467 Mm.274784 NM_001079824 ENSMUSG00000020069 Hnrnph3 AA693301|AI666703|Hnrph3 heterogeneous nuclear ribonucleoprotein H3 protein-coding common_peak1_41_368_-0.523390051075541_8.26578198052263_4.60457641360253 chr11 115276273 115277145 + 4.60457641360253 NA intron (NM_007997, intron 1 of 11) intron (NM_007997, intron 1 of 11) 260 NM_007997 14149 Mm.4719 NM_007997 ENSMUSG00000018861 Fdxr - ferredoxin reductase protein-coding common_peak2_41_368_-0.523390051075541_8.26578198052263_4.60457641360253 chr11 116071080 116072493 + 4.60457641360253 NA intron (NM_001009573, intron 13 of 32) B2_Mm2|SINE|B2 6175 NM_001009573 70450 Mm.259460 NM_001009573 ENSMUSG00000057948 Unc13d 2610108D09Rik|Jinx|Munc13-4|mFLJ00067 unc-13 homolog D (C. elegans) protein-coding unique_peak2_14_137_-0.926480335366821_6.64528428909476_4.60456368019803 chr19 37494881 37495987 + 4.60456368019803 NA Intergenic Intergenic 30180 NR_131009 78640 Mm.234265 NR_131008 1700122C19Rik - RIKEN cDNA 1700122C19 gene ncRNA common_peak1_39_350_-0.537580681487428_8.18653687956085_4.60347113863333 chr11 97823718 97824500 + 4.60347113863333 NA intron (NM_010688, intron 3 of 6) B3|SINE|B2 -16671 NM_001080935 68127 Mm.110270 NM_001080935 ENSMUSG00000050538 B230217C12Rik AI840637 RIKEN cDNA B230217C12 gene protein-coding common_peak1_39_350_-0.537580681487428_8.18653687956085_4.60347113863333-2 chrX 74304741 74305760 + 4.60347113863333 NA TTS (NM_018794) TTS (NM_018794) 238 NM_010273 14567 Mm.205830 NM_010273 ENSMUSG00000015291 Gdi1 GDIA|GDIalpha guanosine diphosphate (GDP) dissociation inhibitor 1 protein-coding common_peak2_118_1122_-0.286069842160957_9.99010729132012_4.6021429827853 chr3 21935026 21937424 + 4.6021429827853 NA Intergenic Intergenic -140427 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_107_1008_-0.303278269894051_9.82707132415933_4.60180898755922 chr15 81300316 81303133 + 4.60180898755922 NA Intergenic BGLII_B|LTR|ERVK -49862 NR_077230 78102 Mm.296832 NR_077229 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA common_peak1_181_1313_0.239207793584074_10.4793534571144_4.60071028871071 chr16 30586969 30588478 + 4.60071028871071 NA promoter-TSS (NM_178069) promoter-TSS (NM_178069) -134 NM_178069 224092 Mm.567 NM_178069 ENSMUSG00000022538 Lsg1 5830465I20|AA409273|D16Bwg1547e large 60S subunit nuclear export GTPase 1 protein-coding common_peak2_138_1334_-0.260639245782315_10.2523044036838_4.60009845154007 chr17 27374612 27377234 + 4.60009845154007 NA Intergenic Intergenic 17826 NR_106077 102466228 NR_106077 ENSMUSG00000106215 Mir7218 mmu-mir-7218 microRNA 7218 ncRNA common_peak2_75_686_-0.370577463048496_9.23887755729385_4.59943508183194 chr10 98683405 98685051 + 4.59943508183194 NA Intergenic Intergenic -230924 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak2_115_1091_-0.290869204034571_9.94732253890257_4.59902812112686 chrX 134599830 134602336 + 4.59902812112686 NA promoter-TSS (NM_013463) promoter-TSS (NM_013463) -78 NM_013463 11605 Mm.1114 NM_013463 ENSMUSG00000031266 Gla Ags galactosidase, alpha protein-coding common_peak1_19_177_-0.784599203335621_7.08343382929859_4.59868229642985-2 chr5 142447204 142447676 + 4.59868229642985 NA intron (NM_199068, intron 2 of 8) L3|LINE|CR1 -16491 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding common_peak1_30_103_0.766242486593215_7.0835609614377_4.59868229642985 chr10 39406323 39406817 + 4.59868229642985 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 36771 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_30_103_0.766242486593215_7.0835609614377_4.59868229642985 chr13 13538120 13539010 + 4.59868229642985 NA Intergenic Intergenic -51844 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding common_peak1_19_177_-0.784599203335621_7.08343382929859_4.59868229642985 chr4 136173710 136174170 + 4.59868229642985 NA intron (NM_177733, intron 1 of 6) RSINE1|SINE|B4 1666 NM_177733 242705 Mm.307932 NM_177733 ENSMUSG00000018983 E2f2 E2F-2 E2F transcription factor 2 protein-coding common_peak1_30_103_0.766242486593215_7.0835609614377_4.59868229642985-2 chr11 62749496 62750057 + 4.59868229642985 NA Intergenic Intergenic -20683 NM_133208 170740 Mm.339982 NM_133208 ENSMUSG00000005267 Zfp287 B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74 zinc finger protein 287 protein-coding common_peak2_51_459_-0.463456495117088_8.61376180338583_4.59752159100654 chr10 82899333 82900930 + 4.59752159100654 NA Intergenic MTD|LTR|ERVL-MaLR 33505 NM_025499 66341 Mm.443284 NM_025499 ENSMUSG00000109864 Eid3 1700027M21Rik|NS4EB EP300 interacting inhibitor of differentiation 3 protein-coding unique_peak2_9_96_-1.13539092574271_6.03221737931577_4.59726053085882-2 chr12 52002469 52003185 + 4.59726053085882 NA intron (NM_029545, intron 2 of 2) intron (NM_029545, intron 2 of 2) 3674 NM_029545 328092 Mm.2821 NM_029545 ENSMUSG00000020956 Dtd2 4930578F06Rik|6530401N04Rik|B830049N13Rik D-tyrosyl-tRNA deacylase 2 protein-coding unique_peak2_9_96_-1.13539092574271_6.03221737931577_4.59726053085882 chr10 117969126 117969861 + 4.59726053085882 NA Intergenic Intergenic 44034 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_281_2988_-0.171569266912437_11.4596625482219_4.59706799386522 chr19 25050783 25055435 + 4.59706799386522 NA intron (NM_028785, intron 2 of 47) intron (NM_028785, intron 2 of 47) 53580 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak1_48_209_0.562630719244562_7.9955608772884_4.59643790775561 chr13 51762851 51763833 + 4.59643790775561 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 30405 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_43_178_0.602594276616051_7.78511291557228_4.59639915383596 chr1 40498553 40499314 + 4.59639915383596 NA 3' UTR (NM_008365, exon 11 of 11) 3' UTR (NM_008365, exon 11 of 11) -16429 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak2_253_2040_0.193762538327681_11.0919417361966_4.59538242749927 chr12 78979833 78982219 + 4.59538242749927 NA intron (NM_178745, intron 1 of 2) intron (NM_178745, intron 1 of 2) 2452 NM_001170401 268567 Mm.341747 NM_178745 ENSMUSG00000046157 Tmem229b 6330442E10Rik|9830138K24|AU019070 transmembrane protein 229B protein-coding common_peak1_313_3384_-0.160852172870351_11.6445140320272_4.59524850861045 chr6 122809946 122812214 + 4.59524850861045 NA Intergenic Intergenic -9104 NM_021899 60611 Mm.87142 NM_021899 ENSMUSG00000003154 Foxj2 Fhx forkhead box J2 protein-coding common_peak1_64_317_0.464031565048542_8.54489873780863_4.59493982804018 chr6 91878059 91878748 + 4.59493982804018 NA intron (NM_172730, intron 1 of 10) CpG 350 NM_172730 232236 Mm.234879 NM_172730 ENSMUSG00000034083 Ccdc174 C130022K22Rik coiled-coil domain containing 174 protein-coding common_peak2_172_1707_-0.228881728127941_10.6236513955565_4.59491739990356 chr1 162739214 162741039 + 4.59491739990356 NA intron (NM_001081290, intron 1 of 34) CpG 430 NM_001081290 226562 Mm.245446 NM_001081290 ENSMUSG00000040225 Prrc2c 1810043M20Rik|9630039I18Rik|A630006J20|Bat2d|Bat2d1|Bat2l2|E130112L15Rik|Prrc3|mKIAA1096 proline-rich coiled-coil 2C protein-coding common_peak1_121_766_0.308048994730395_9.73710726486813_4.5935066102656 chr12 75595158 75596270 + 4.5935066102656 NA 5' UTR (NM_012024, exon 1 of 14) 5' UTR (NM_012024, exon 1 of 14) 486 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak2_112_689_0.325066946506869_9.59298602491897_4.59225991149308 chr9 98562847 98564462 + 4.59225991149308 NA promoter-TSS (NM_015827) promoter-TSS (NM_015827) -43 NR_029444 75881 Mm.483402 NM_175227 ENSMUSG00000051074 4930579K19Rik - RIKEN cDNA 4930579K19 gene ncRNA common_peak2_107_648_0.333357521213168_9.50875342860572_4.59140937905743 chr4 32131031 32132829 + 4.59140937905743 NA Intergenic Intergenic 167823 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_116_723_0.317232078677939_9.65846192642218_4.59134011970941 chr8 20423785 20425510 + 4.59134011970941 NA non-coding (NR_028428, exon 1 of 6) non-coding (NR_028428, exon 1 of 6) 167 NR_028428 381598 Mm.359054 NM_001024708 ENSMUSG00000071793 2610005L07Rik 2810038F24Rik|6720476A01Rik cadherin 11 pseudogene pseudo common_peak2_70_638_-0.386512575099978_9.12641583339701_4.5912068605604 chr8 25975811 25977231 + 4.5912068605604 NA intron (NM_029884, intron 1 of 17) CpG 223 NM_029884 52120 Mm.28326 NM_029884 ENSMUSG00000037260 Hgsnat 9430010M12Rik|AW208455|D8Ertd354e|Tmem76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding common_peak2_81_441_0.400153016860351_8.98797906782161_4.59077533623507-2 chr11 59661765 59663294 + 4.59077533623507 NA promoter-TSS (NM_012027) promoter-TSS (NM_012027) 34 NM_012027 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding common_peak2_81_441_0.400153016860351_8.98797906782161_4.59077533623507 chr10 83359395 83361031 + 4.59077533623507 NA promoter-TSS (NM_026579) promoter-TSS (NM_026579) -8 NM_026579 28109 Mm.196210 NM_026579 ENSMUSG00000020255 D10Wsu102e AI747614|C430041I18Rik DNA segment, Chr 10, Wayne State University 102, expressed protein-coding common_peak2_196_1459_0.22735396285792_10.6254296351963_4.58948451894232 chr6 67265885 67268488 + 4.58948451894232 NA exon (NM_001113566, exon 1 of 8) exon (NM_001113566, exon 1 of 8) 207 NM_025814 66870 Mm.240490 NM_025814 ENSMUSG00000036371 Serbp1 1200009K13Rik|9330147J08Rik|AL022786|Pairbp1 serpine1 mRNA binding protein 1 protein-coding common_peak2_156_1530_-0.242782933094139_10.4588671009527_4.58868919570386 chr8 105604660 105607578 + 4.58868919570386 NA intron (NM_001081241, intron 1 of 21) intron (NM_001081241, intron 1 of 21) 890 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Fam65a 2310066E14Rik|AI837433 family with sequence similarity 65, member A protein-coding common_peak2_115_715_0.318072159621025_9.64285185707477_4.58847628339895 chr13 94976033 94977134 + 4.58847628339895 NA exon (NM_172590, exon 1 of 13) exon (NM_172590, exon 1 of 13) 239 NM_172590 218460 Mm.33856 NM_172590 ENSMUSG00000042015 Wdr41 B830029I03Rik|MSTP048 WD repeat domain 41 protein-coding unique_peak2_15_145_-0.89357129575485_6.74303891100259_4.5870934535595 chr1 156008558 156009623 + 4.5870934535595 NA intron (NM_144791, intron 6 of 6) PB1D9|SINE|Alu 25727 NM_001160019 208263 Mm.211654 NM_144791 ENSMUSG00000026466 Tor1aip1 LAP1|Lap1B torsin A interacting protein 1 protein-coding common_peak1_34_305_-0.575942128169117_7.96941677860809_4.58653049154625 chr11 49052158 49052699 + 4.58653049154625 NA intron (NM_010999, intron 1 of 5) intron (NM_010999, intron 1 of 5) -1186 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5|OTTMUSG00000005540 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak1_34_305_-0.575942128169117_7.96941677860809_4.58653049154625-2 chr6 108167985 108168612 + 4.58653049154625 NA intron (NM_145937, intron 3 of 8) ORR1E|LTR|ERVL-MaLR 17285 NM_145937 58911 Mm.439876 NM_145937 ENSMUSG00000030101 Sumf1 AA543204|AI463102|AI851573|FGE sulfatase modifying factor 1 protein-coding common_peak1_66_599_-0.398274990346158_9.0296811953228_4.5864936518233 chr9 83833895 83834698 + 4.5864936518233 NA promoter-TSS (NM_001284272) promoter-TSS (NM_001284272) -393 NM_009445 22137 Mm.1904 NM_009445 ENSMUSG00000038379 Ttk AL022661|Esk1|Mps1|PYT|esk Ttk protein kinase protein-coding common_peak1_18_169_-0.809026732740811_7.0048775697673_4.58620480195575-3 chr13 55430046 55430552 + 4.58620480195575 NA Intergenic MurSatRep1|Unknown|Unknown -3495 NM_021489 58992 Mm.42224 NM_021489 ENSMUSG00000021492 F12 FXII|HAF coagulation factor XII (Hageman factor) protein-coding common_peak1_18_169_-0.809026732740811_7.0048775697673_4.58620480195575 chr1 160305921 160306407 + 4.58620480195575 NA intron (NM_001038621, intron 2 of 8) intron (NM_001038621, intron 2 of 8) -10192 NR_035448 100316784 NR_035448 ENSMUSG00000089204 Mir1927 mmu-mir-1927 microRNA 1927 ncRNA common_peak1_18_169_-0.809026732740811_7.0048775697673_4.58620480195575-2 chr10 80698438 80698740 + 4.58620480195575 NA intron (NM_172457, intron 1 of 3) RMER1B|Other|Other 3231 NM_172457 208228 Mm.49309 NM_172457 ENSMUSG00000003348 Mob3a 5330417K06Rik|A630029F06|AV218468|Mobkl2a MOB kinase activator 3A protein-coding unique_peak2_20_186_-0.769419816089139_7.16218455184307_4.58616523069384 chrX 167197973 167199154 + 4.58616523069384 NA Intergenic Intergenic 10655 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_20_186_-0.769419816089139_7.16218455184307_4.58616523069384 chrX 36982320 36982856 + 4.58616523069384 NA intron (NM_001177323, intron 1 of 9) intron (NM_001177323, intron 1 of 9) 7107 NM_001177324 56526 Mm.260036 NM_019942 ENSMUSG00000050379 Sept6 2810035H17Rik|C920001C06Rik|Sep6|mKIAA0128 septin 6 protein-coding common_peak1_172_1227_0.24711568612237_10.3856526884314_4.58612289487319 chr19 53434241 53435328 + 4.58612289487319 NA Intergenic Intergenic 30012 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_41_166_0.620382662510803_7.69389562372945_4.585498072677-2 chr5 64386360 64387189 + 4.585498072677 NA Intergenic A-rich|Low_complexity|Low_complexity 81168 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA unique_peak2_41_166_0.620382662510803_7.69389562372945_4.585498072677 chr10 39494116 39495516 + 4.585498072677 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) -118118 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak1_41_166_0.620382662510803_7.69389562372945_4.585498072677 chr12 25325978 25327035 + 4.585498072677 NA Intergenic Intergenic 197332 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_52_467_-0.454622954140293_8.64305324251326_4.58511344711146 chr10 116913002 116915279 + 4.58511344711146 NA exon (NM_001003950, exon 7 of 10) exon (NM_001003950, exon 7 of 10) -17261 NM_001033333 237558 Mm.336386 NM_001033333 ENSMUSG00000034057 Myrfl Gm239 myelin regulatory factor-like protein-coding common_peak2_55_495_-0.441019249182593_8.73368668579558_4.58462719594923 chr3 102755126 102756959 + 4.58462719594923 NA intron (NM_001243132, intron 2 of 7) intron (NM_001243132, intron 2 of 7) -20625 NR_040588 78491 Mm.243766 NR_040588 ENSMUSG00000086745 Tspan2os 2410057H14Rik tetraspanin 2, opposite strand ncRNA common_peak1_302_3246_-0.163908959527348_11.5829371895224_4.58349721396459 chr1 138303313 138305440 + 4.58349721396459 NA Intergenic Intergenic 30638 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_39_154_0.641622133542895_7.59693547204568_4.58312422817739 chr5 45449659 45450156 + 4.58312422817739 NA intron (NM_024236, intron 1 of 6) CpG 322 NM_024236 110391 Mm.30204 NM_024236 ENSMUSG00000015806 Qdpr 2610008L04Rik|D5Ertd371e|Dhpr|PKU2 quinoid dihydropteridine reductase protein-coding common_peak2_39_154_0.641622133542895_7.59693547204568_4.58312422817739 chr4 84884176 84885082 + 4.58312422817739 NA exon (NM_177385, exon 1 of 5) exon (NM_177385, exon 1 of 5) 320 NM_177385 338349 Mm.440562 NM_175275 ENSMUSG00000038070 Cntln AI448092|B430108F07Rik|D530005L17Rik centlein, centrosomal protein protein-coding unique_peak2_39_154_0.641622133542895_7.59693547204568_4.58312422817739 chr4 8834419 8835927 + 4.58312422817739 NA intron (NM_001277149, intron 15 of 37) intron (NM_001277149, intron 15 of 37) 144767 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_26_82_0.84716813549267_6.79862349909326_4.58208152785194 chr2 167962390 167963001 + 4.58208152785194 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 30368 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_26_82_0.84716813549267_6.79862349909326_4.58208152785194-2 chr9 22388186 22388823 + 4.58208152785194 NA intron (NM_028390, intron 1 of 23) intron (NM_028390, intron 1 of 23) 702 NM_028390 68743 Mm.282751 NM_028390 ENSMUSG00000036777 Anln 1110037A17Rik|2900037I21Rik|C78101|Scraps anillin, actin binding protein protein-coding common_peak2_169_1673_-0.230829653511496_10.5936689857946_4.58047440848597 chr2 165168820 165172653 + 4.58047440848597 NA exon (NM_174988, exon 3 of 12) exon (NM_174988, exon 3 of 12) 64001 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak1_22_63_0.93846080409351_6.46923040204675_4.57998488725359 chr11 31732396 31732937 + 4.57998488725359 NA Intergenic Intergenic -60804 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak1_22_63_0.93846080409351_6.46923040204675_4.57998488725359-2 chr15 76205897 76206362 + 4.57998488725359 NA exon (NM_001163540, exon 1 of 33) exon (NM_001163540, exon 1 of 33) 192 NM_201389 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding unique_peak2_17_161_-0.835164641011957_6.92226768237865_4.57938536838542 chr9 107739653 107741038 + 4.57938536838542 NA TTS (NM_148930) TTS (NM_148930) -29870 NM_011349 20350 Mm.12903 NM_011349 ENSMUSG00000034684 Sema3f Sema4|Semak sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein-coding unique_peak2_16_153_-0.863250279720729_6.83516140083454_4.57925078504907 chr15 76220531 76221525 + 4.57925078504907 NA intron (NM_011117, intron 1 of 31) intron (NM_011117, intron 1 of 31) -5355 NR_035463 100316774 NR_035463 ENSMUSG00000087899 Mir1942 mmu-mir-1942 microRNA 1942 ncRNA common_peak1_16_153_-0.863250279720729_6.83516140083454_4.57925078504907-2 chrX 36903125 36903514 + 4.57925078504907 NA promoter-TSS (NM_029891) promoter-TSS (NM_029891) -420 NM_029891 77286 Mm.21649 NM_029891 ENSMUSG00000044149 Nkrf 9430034D17Rik|AW124770|C80287 NF-kappaB repressing factor protein-coding common_peak2_16_153_-0.863250279720729_6.83516140083454_4.57925078504907 chr1 37326945 37327639 + 4.57925078504907 NA intron (NM_001290797, intron 1 of 25) intron (NM_001290797, intron 1 of 25) 27454 NM_001290797 269180 Mm.5294 NM_030266 ENSMUSG00000026113 Inpp4a 107kDa|9630012D15|D130048C09Rik|R74740 inositol polyphosphate-4-phosphatase, type I protein-coding common_peak1_16_153_-0.863250279720729_6.83516140083454_4.57925078504907 chr15 83601758 83602216 + 4.57925078504907 NA TTS (NM_022723) TTS (NM_022723) -6830 NM_183017 223723 Mm.46778 NM_183017 ENSMUSG00000016757 Ttll12 BC055368|D430005B17 tubulin tyrosine ligase-like family, member 12 protein-coding common_peak2_189_1391_0.232138605612839_10.5590127986551_4.57800430539484 chr15 75908318 75910558 + 4.57800430539484 NA promoter-TSS (NM_023240) promoter-TSS (NM_023240) -94 NM_001285434 66656 Mm.258927 NM_023240 ENSMUSG00000055762 Eef1d EF-1-delta eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) protein-coding common_peak1_96_895_-0.322016558694195_9.64634664271051_4.57779382741164 chr18 12973431 12974282 + 4.57779382741164 NA intron (NM_008378, intron 1 of 10) (CTCGG)n|Simple_repeat|Simple_repeat 1604 NM_008378 16210 Mm.8154 NM_008378 ENSMUSG00000024423 Impact E430016J11Rik impact, RWD domain protein protein-coding common_peak1_358_3203_0.155434666838804_11.7233757658281_4.57565242651998 chr6 97210301 97212856 + 4.57565242651998 NA intron (NM_022992, intron 1 of 2) intron (NM_022992, intron 1 of 2) 786 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak1_181_1808_-0.222019338714837_10.7099670232638_4.57503539566175 chr8 107435798 107437088 + 4.57503539566175 NA promoter-TSS (NM_025830) promoter-TSS (NM_025830) 45 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak2_146_987_0.27264352147929_10.0846889923243_4.5736397878534 chr3 90514007 90515812 + 4.5736397878534 NA promoter-TSS (NM_011309) promoter-TSS (NM_011309) 474 NM_009113 20196 Mm.6523 NM_009113 ENSMUSG00000042312 S100a13 - S100 calcium binding protein A13 protein-coding common_peak1_99_925_-0.315628568751141_9.69705409888467_4.5718336709251 chr3 89213662 89214461 + 4.5718336709251 NA exon (NM_001161824, exon 1 of 8) exon (NM_001161824, exon 1 of 8) 274 NM_001161824 17827 Mm.280943 NM_013604 ENSMUSG00000064068 Mtx1 Gcap6|Mtx metaxin 1 protein-coding common_peak1_93_535_0.363654208154603_9.24791629453507_4.57121201592929 chr8 119837250 119838768 + 4.57121201592929 NA intron (NM_028071, intron 2 of 3) intron (NM_028071, intron 2 of 3) 2570 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak2_83_457_0.391495478074267_9.03495152713408_4.57019008800548 chr7 27673496 27675170 + 4.57019008800548 NA promoter-TSS (NM_198417) promoter-TSS (NM_198417) 248 NM_001290528 269881 Mm.389883 NM_001081292 ENSMUSG00000040390 Map3k10 BC028668|BC046514|MST|Mlk2 mitogen-activated protein kinase kinase kinase 10 protein-coding common_peak1_36_323_-0.560066351673214_8.05981682704802_4.56941466829362 chr2 181319643 181320158 + 4.56941466829362 NA promoter-TSS (NR_030710) promoter-TSS (NR_030710) 176 NM_001001882 269400 Mm.11333 NM_001001882 ENSMUSG00000038685 Rtel1 AI451565|AW540478|Rtel regulator of telomere elongation helicase 1 protein-coding common_peak1_101_945_-0.311413285025582_9.7299897308266_4.56935925325902 chr11 22990055 22991271 + 4.56935925325902 NA promoter-TSS (NM_009837) promoter-TSS (NM_009837) 70 NM_009837 12464 Mm.296985 NM_009837 ENSMUSG00000007739 Cct4 2610204B21Rik|A45|C78323|Cctd chaperonin containing Tcp1, subunit 4 (delta) protein-coding common_peak2_67_609_-0.395904549103365_9.05471315789856_4.56898786453606 chr5 76303416 76305277 + 4.56898786453606 NA promoter-TSS (NM_001305222) promoter-TSS (NM_001305222) 202 NM_007715 12753 Mm.3552 NM_007715 ENSMUSG00000029238 Clock 5330400M04Rik|KAT13D circadian locomotor output cycles kaput protein-coding unique_peak1_11_18_1.53923564346215_5.01754533517466_4.56850390438427 chr11 53843706 53844117 + 4.56850390438427 NA intron (NR_033332, intron 2 of 3) ID_B1|SINE|B4 15345 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA common_peak1_46_197_0.573774467346408_7.91624385375281_4.56829856819349 chr6 146887936 146889045 + 4.56829856819349 NA promoter-TSS (NM_026221) promoter-TSS (NM_026221) -4 NM_001170433 67533 Mm.103382 NM_026221 ENSMUSG00000016487 Ppfibp1 4632409B19Rik|AW214454|AW261454 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein-coding common_peak1_32_114_0.731829896716505_7.21140499930263_4.5682538690824-3 chr4 43875334 43876095 + 4.5682538690824 NA intron (NM_016678, intron 1 of 20) CpG 184 NM_016678 53614 Mm.331573 NM_016678 ENSMUSG00000028476 Reck St15|mRECK reversion-inducing-cysteine-rich protein with kazal motifs protein-coding common_peak1_32_114_0.731829896716505_7.21140499930263_4.5682538690824-2 chr19 46620833 46621387 + 4.5682538690824 NA intron (NM_001177812, intron 2 of 4) ID_B1|SINE|B4 -2291 NM_001177813 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_32_114_0.731829896716505_7.21140499930263_4.5682538690824 chr17 24896480 24897041 + 4.5682538690824 NA TTS (NM_023260) TTS (NM_023260) 260 NM_019730 79059 Mm.430765 NM_019730 ENSMUSG00000073435 Nme3 1810009F08Rik|AI413736|DR-nm23|Ndk3|Nm23-DR|Nm23-M3 NME/NM23 nucleoside diphosphate kinase 3 protein-coding common_peak1_131_853_0.2924523104131_9.88431841482704_4.56774933155848 chr16 20672749 20674049 + 4.56774933155848 NA intron (NM_001304432, intron 1 of 31) CpG 672 NM_001304432 208643 Mm.260256 NM_145941 ENSMUSG00000045983 Eif4g1 E030015G23Rik|eIF-4-gamma 1|eIF-4G 1|eIF-4G1|eIF4GI eukaryotic translation initiation factor 4, gamma 1 protein-coding common_peak1_140_1355_-0.257875859557041_10.2762035333578_4.56767042216011 chr19 32711663 32712779 + 4.56767042216011 NA promoter-TSS (NM_026487) promoter-TSS (NM_026487) 77 NM_026487 67979 Mm.27123 NM_026487 ENSMUSG00000013662 Atad1 4921525H23Rik|AW107648|Thorase ATPase family, AAA domain containing 1 protein-coding common_peak1_25_228_-0.683782543456012_7.49731251636894_4.56763639342641 chr10 21235435 21236064 + 4.56763639342641 NA Intergenic L1MB3|LINE|L1 -60230 NM_001042593 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak1_66_331_0.455504268802798_8.60279156574832_4.56673681932756 chr17 80563988 80564817 + 4.56673681932756 NA promoter-TSS (NM_001033443) promoter-TSS (NM_001033443) -568 NM_001033443 381113 Mm.329216 NM_001033443 ENSMUSG00000033966 Cdkl4 AU067824|Gm942 cyclin-dependent kinase-like 4 protein-coding common_peak1_56_504_-0.435640858088984_8.76231914859467_4.56607744414332 chr9 20878512 20879227 + 4.56607744414332 NA intron (NM_145154, intron 1 of 5) intron (NM_145154, intron 1 of 5) 841 NM_145154 70726 Mm.34019 NM_145154 ENSMUSG00000038742 Angptl6 6330404E11Rik|AGF|ARP3|Arp5 angiopoietin-like 6 protein-coding common_peak2_123_1174_-0.278538214345344_10.0591759342797_4.5658838973416 chr6 122740746 122743859 + 4.5658838973416 NA intron (NM_011401, intron 1 of 9) intron (NM_011401, intron 1 of 9) 443 NM_011401 20527 Mm.395108 NM_011401 ENSMUSG00000003153 Slc2a3 AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3 solute carrier family 2 (facilitated glucose transporter), member 3 protein-coding common_peak2_71_367_0.434348028188367_8.7407359701512_4.56464352856323 chr2 102866981 102868662 + 4.56464352856323 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 33844 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_593_6118_0.113121107319047_12.6356407374943_4.56459499195533 chr18 35847224 35851658 + 4.56459499195533 NA intron (NM_133687, intron 1 of 2) intron (NM_133687, intron 1 of 2) 19623 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_73_666_-0.375146988786819_9.19396945679118_4.56453604892613 chr17 21008381 21009859 + 4.56453604892613 NA intron (NM_145483, intron 1 of 4) CpG 179 NM_145483 224585 Mm.296036 NM_145483 ENSMUSG00000067942 Zfp160 6720480D16Rik|F11|HKr18|HZF5|KR18|mKIAA1611|mszf47 zinc finger protein 160 protein-coding common_peak2_44_184_0.59479717704832_7.82878004904047_4.56397129386344 chr10 127170014 127171327 + 4.56397129386344 NA exon (NM_008080, exon 9 of 11) exon (NM_008080, exon 9 of 11) 4839 NM_001244618 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak1_31_279_-0.606417442633443_7.82607429562825_4.56397129386344 chr1 128548782 128549373 + 4.56397129386344 NA Intergenic Intergenic 43222 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak2_44_184_0.59479717704832_7.82878004904047_4.56397129386344-2 chr17 36314867 36315740 + 4.56397129386344 NA Intergenic ERVB5_1-I_MM-int|LTR|ERVK 10847 NM_013544 14985 Mm.347438 NM_013544 ENSMUSG00000024448 H2-M10.1 9.5H histocompatibility 2, M region locus 10.1 protein-coding common_peak2_95_551_0.358475633686639_9.28776227362149_4.56347774250747 chr14 14350690 14353830 + 4.56347774250747 NA intron (NM_008369, intron 10 of 11) intron (NM_008369, intron 10 of 11) 5765 NM_008369 16188 Mm.425857 NM_008369 ENSMUSG00000068758 Il3ra CD123|CDw123|SUT-1 interleukin 3 receptor, alpha chain protein-coding common_peak2_104_976_-0.306634521291565_9.7788974913226_4.56285163981747 chr9 66124900 66127586 + 4.56285163981747 NA promoter-TSS (NM_026635) promoter-TSS (NM_026635) -368 NM_026635 68250 Mm.27107 NM_026635 ENSMUSG00000032381 Fam96a 5730536A07Rik family with sequence similarity 96, member A protein-coding unique_peak2_28_253_-0.640021372259597_7.66867400064237_4.56275402648236 chr8 116978341 116979597 + 4.56275402648236 NA promoter-TSS (NM_027103) promoter-TSS (NM_027103) -26 NM_027103 69528 Mm.272846 NM_027103 ENSMUSG00000031847 1700030J22Rik - RIKEN cDNA 1700030J22 gene protein-coding unique_peak2_5_65_-1.48384327363907_5.30247248253892_4.56142700122524-2 chr9 40611724 40612365 + 4.56142700122524 NA Intergenic RLTR41|LTR|ERV1 -73920 NM_133733 71566 Mm.280560 NM_133733 ENSMUSG00000032024 Clmp 9030425E11Rik|ACAM|ASP5|AW557819 CXADR-like membrane protein protein-coding unique_peak2_5_65_-1.48384327363907_5.30247248253892_4.56142700122524 chr18 35910359 35910852 + 4.56142700122524 NA Intergenic B3|SINE|B2 -54225 NM_028707 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding common_peak2_165_1628_-0.233652708170814_10.5529445344401_4.56132345964242 chr17 28521890 28524267 + 4.56132345964242 NA Intergenic CpG -7783 NM_026290 67645 Mm.46170 NM_026290 ENSMUSG00000024223 Armc12 4930511I11Rik|AV041658 armadillo repeat containing 12 protein-coding common_peak1_52_235_0.533098716081271_8.14919240740248_4.56114791664676 chr15 79773938 79774573 + 4.56114791664676 NA intron (NM_017470, intron 1 of 3) CpG 212 NM_017470 54152 Mm.288159 NM_017470 ENSMUSG00000022420 Dnal4 D15Ertd424e|Dnalc4 dynein, axonemal, light chain 4 protein-coding common_peak2_52_235_0.533098716081271_8.14919240740248_4.56114791664676 chr11 78751080 78752244 + 4.56114791664676 NA promoter-TSS (NM_197989) promoter-TSS (NM_197989) 67 NM_197989 69109 Mm.341420 NM_197989 ENSMUSG00000049489 Fam58b 1810009O10Rik|Fam58a family with sequence similarity 58, member B protein-coding common_peak1_52_235_0.533098716081271_8.14919240740248_4.56114791664676-2 chr2 165653297 165654291 + 4.56114791664676 NA intron (NM_001271962, intron 1 of 15) intron (NM_001271962, intron 1 of 15) -1504 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding unique_peak2_6_73_-1.37611323798374_5.52139674663708_4.56098276153749-2 chr16 96086486 96087184 + 4.56098276153749 NA Intergenic Lx9|LINE|L1 -4407 NM_145125 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding unique_peak2_6_73_-1.37611323798374_5.52139674663708_4.56098276153749-3 chr6 39341780 39342424 + 4.56098276153749 NA intron (NM_028123, intron 13 of 14) intron (NM_028123, intron 13 of 14) 35605 NM_028123 72144 Mm.482167 NM_028123 ENSMUSG00000029924 Slc37a3 2610507O21Rik|AU044904 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 protein-coding unique_peak2_6_73_-1.37611323798374_5.52139674663708_4.56098276153749 chr13 35991132 35991584 + 4.56098276153749 NA intron (NM_201358, intron 2 of 2) CpG 23452 NM_029628 76487 Mm.44745 NM_029628 ENSMUSG00000050423 Ppp1r3g 1600032L17Rik protein phosphatase 1, regulatory (inhibitor) subunit 3G protein-coding unique_peak2_6_73_-1.37611323798374_5.52139674663708_4.56098276153749-4 chr8 72227755 72228544 + 4.56098276153749 NA Intergenic MMVL30-int|LTR|ERV1 8419 NM_026455 67922 Mm.28327 NM_026455 ENSMUSG00000003039 Fam32a 2510049I19Rik|AW822030|OTAG-12|Otag12 family with sequence similarity 32, member A protein-coding common_peak1_14_29_1.27515352580283_5.54446735850993_4.56098276153749 chr10 128302310 128302629 + 4.56098276153749 NA promoter-TSS (NM_001252327) promoter-TSS (NM_001252327) -866 NM_133992 103135 Mm.244183 NM_133992 ENSMUSG00000005682 Pan2 1200014O24Rik|AI047843|AW742773|Usp52|mKIAA0710 PAN2 poly(A) specific ribonuclease subunit protein-coding common_peak1_114_1079_-0.290249206079002_9.93169099401133_4.55987758805922 chr3 30968436 30969901 + 4.55987758805922 NA intron (NM_001165956, intron 1 of 15) CpG 247 NM_001165954 241915 Mm.233173 NM_153421 ENSMUSG00000037652 Phc3 E030046K01Rik|Edr3|Hph3 polyhomeotic-like 3 (Drosophila) protein-coding common_peak1_58_276_0.491784238992636_8.35963428554551_4.55927387078978 chr11 63969414 63970340 + 4.55927387078978 NA intron (NM_178379, intron 6 of 6) intron (NM_178379, intron 6 of 6) 5651 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak1_58_276_0.491784238992636_8.35963428554551_4.55927387078978-2 chr18 80633932 80635187 + 4.55927387078978 NA intron (NM_198429, intron 9 of 9) intron (NM_198429, intron 9 of 9) 73614 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_19_49_1.04727803785605_6.16749520870275_4.55920603501361 chr19 56394402 56394864 + 4.55920603501361 NA Intergenic LTR41|LTR|ERVL -2496 NM_007611 12369 Mm.35687 NM_007611 ENSMUSG00000025076 Casp7 AI314680|CMH-1|ICE-IAP3|Mch3|caspase-7|mCASP-7 caspase 7 protein-coding unique_peak1_19_49_1.04727803785605_6.16749520870275_4.55920603501361 chr11 6332276 6332788 + 4.55920603501361 NA intron (NM_001252282, intron 5 of 23) intron (NM_001252282, intron 5 of 23) 39974 NM_001252288 18293 Mm.276348 NM_010956 ENSMUSG00000020456 Ogdh 2210403E04Rik|2210412K19Rik|AA409584|d1401|mKIAA4192 oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) protein-coding unique_peak2_49_216_0.551076270878261_8.03708936788361_4.55785083063143 chr2 145225126 145226658 + 4.55785083063143 NA Intergenic Intergenic -16719 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding common_peak2_77_412_0.409557789374771_8.89477686610683_4.55655038802984 chr15 103254472 103256166 + 4.55655038802984 NA 5' UTR (NM_008685, exon 1 of 3) 5' UTR (NM_008685, exon 1 of 3) 120 NM_008685 18022 Mm.457989 NM_008685 ENSMUSG00000058794 Nfe2 NF-E2|NF-E2/P45|p45|p45NFE2|p45nf-e2 nuclear factor, erythroid derived 2 protein-coding common_peak1_89_824_-0.33545936038219_9.52052062894208_4.55641989060627 chr4 135962821 135963679 + 4.55641989060627 NA TTS (NM_008254) TTS (NM_008254) -1915 NM_178389 74246 Mm.247946 NM_178389 ENSMUSG00000028671 Gale 2310002A12Rik|AI323962 galactose-4-epimerase, UDP protein-coding common_peak2_167_1181_0.250297257180035_10.3321629487676_4.5557576516759 chr2 91648914 91651038 + 4.5557576516759 NA promoter-TSS (NM_001145902) promoter-TSS (NM_001145902) -142 NR_027372 228359 Mm.22413 NM_146124 ENSMUSG00000027247 Arhgap1 B230365D05Rik|C76222|Cdc42GAP|p50rhoGAP Rho GTPase activating protein 1 protein-coding common_peak2_191_1411_0.230088028379983_10.5785683874612_4.55540270150911 chr3 133309941 133311463 + 4.55540270150911 NA intron (NM_001293641, intron 1 of 11) intron (NM_001293641, intron 1 of 11) 592 NM_146141 74776 Mm.210305 NM_146141 ENSMUSG00000028013 Ppa2 1110013G13Rik|Sid6306 pyrophosphatase (inorganic) 2 protein-coding unique_peak2_12_120_-0.990054303820018_6.42383608536459_4.55450662089388 chr8 46552002 46552657 + 4.55450662089388 NA intron (NM_027973, intron 1 of 12) intron (NM_027973, intron 1 of 12) 260 NM_027973 71876 Mm.22108 NM_027973 ENSMUSG00000031629 Cenpu 1700029A22Rik|Mlf1ip centromere protein U protein-coding common_peak1_12_120_-0.990054303820018_6.42383608536459_4.55450662089388 chr19 3084042 3084350 + 4.55450662089388 NA Intergenic MMVL30-int|LTR|ERV1 113507 NR_045304 70011 Mm.393871 NR_045304 ENSMUSG00000100969 1700030N03Rik 1700087C08Rik RIKEN cDNA 1700030N03 gene ncRNA common_peak2_24_219_-0.695344521388276_7.43368745283052_4.55416581015447 chrX 20950029 20951438 + 4.55416581015447 NA promoter-TSS (NM_007922) promoter-TSS (NM_007922) -125 NM_007922 13712 Mm.405823 NM_007922 ENSMUSG00000009406 Elk1 Elk-1 ELK1, member of ETS oncogene family protein-coding common_peak1_24_219_-0.695344521388276_7.43368745283052_4.55416581015447 chr1 95667791 95668251 + 4.55416581015447 NA promoter-TSS (NM_009183) promoter-TSS (NM_009183) -427 NM_001159745 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak1_24_219_-0.695344521388276_7.43368745283052_4.55416581015447-2 chr14 70279438 70280023 + 4.55416581015447 NA intron (NM_001304992, intron 1 of 12) intron (NM_001304992, intron 1 of 12) 9767 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak1_24_219_-0.695344521388276_7.43368745283052_4.55416581015447-3 chr16 3895651 3896171 + 4.55416581015447 NA intron (NM_029090, intron 2 of 6) intron (NM_029090, intron 2 of 6) 11292 NM_001290689 74763 Mm.28403 NM_029090 ENSMUSG00000005982 Naa60 1200013P24Rik|AI315146|Nat15 N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding common_peak2_29_98_0.779299812518094_7.01900652633866_4.55341608606666 chr3 96032469 96033112 + 4.55341608606666 NA exon (NM_013841, exon 12 of 15) exon (NM_013841, exon 12 of 15) 25665 NM_013841 22365 Mm.263185 NM_013841 ENSMUSG00000015747 Vps45 AI462172|AW554165|mVps45 vacuolar protein sorting 45 protein-coding common_peak1_29_98_0.779299812518094_7.01900652633866_4.55341608606666-2 chr2 174333793 174334399 + 4.55341608606666 NA intron (NM_001310083, intron 2 of 12) intron (NM_001310083, intron 2 of 12) 4007 NM_001077510 14683 Mm.125770 NM_010309 ENSMUSG00000027523 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus protein-coding common_peak1_29_98_0.779299812518094_7.01900652633866_4.55341608606666 chr2 163658169 163658764 + 4.55341608606666 NA promoter-TSS (NM_001039390) promoter-TSS (NM_001039390) 8 NM_001164053 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak1_125_801_0.300763044683219_9.79783994879653_4.55329959954766 chr3 93520401 93521800 + 4.55329959954766 NA intron (NM_016740, intron 1 of 2) intron (NM_016740, intron 1 of 2) 604 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding common_peak1_99_583_0.349415255629077_9.36453218669456_4.55315107130003 chr11 121099525 121100799 + 4.55315107130003 NA Intergenic RMER10A|LTR|ERVL 18515 NM_027622 70956 Mm.158506 NM_027622 ENSMUSG00000039337 Tex19.2 4921530G04Rik|Tex19b testis expressed gene 19.2 protein-coding common_peak1_135_1301_-0.263140538632394_10.2149434638494_4.55296015508568 chr4 41274458 41275701 + 4.55296015508568 NA promoter-TSS (NM_026872) promoter-TSS (NM_026872) 56 NM_026872 68926 Mm.41864 NM_026872 ENSMUSG00000028433 Ubap2 1190005K07Rik|AA408600|AU045235|UBAP-2|mKIAA1491 ubiquitin-associated protein 2 protein-coding common_peak1_179_1295_0.239553257052719_10.459626631411_4.55087965853566 chrX 12086880 12089475 + 4.55087965853566 NA intron (NM_001168321, intron 1 of 13) CpG -7624 NM_029510 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_217_2220_-0.198639130830989_11.0176741121315_4.54931912257426 chr11 95309164 95310445 + 4.54931912257426 NA intron (NM_001195003, intron 1 of 14) CpG 442 NM_001195004 217127 Mm.90213 NM_177619 ENSMUSG00000038909 Kat7 Hbo1|Hboa|Myst2 K(lysine) acetyltransferase 7 protein-coding common_peak1_42_172_0.611098942617226_7.74017769894534_4.54832834578996 chr17 35246498 35247140 + 4.54832834578996 NA intron (NM_001252457, intron 4 of 10) PB1D9|SINE|Alu 2744 NR_105941 102465589 NR_105941 ENSMUSG00000098499 Mir6975 Gm27693|mmu-mir-6975 microRNA 6975 ncRNA common_peak1_72_375_0.427730174707991_8.76845393903163_4.54656778344974 chr12 87199627 87200529 + 4.54656778344974 NA promoter-TSS (NM_001290288) promoter-TSS (NM_001290288) 151 NM_001033475 382620 Mm.374912 NM_001033475 ENSMUSG00000034111 Tmed8 6430595O10Rik|AI447224|Gm1184|Mem1 transmembrane p24 trafficking protein 8 protein-coding common_peak2_200_1500_0.222969954682316_10.6631932389618_4.54566481778267 chr16 22856577 22858834 + 4.54566481778267 NA promoter-TSS (NM_026400) promoter-TSS (NM_026400) -36 NM_001316746 70573 Mm.68291 NM_001081368 ENSMUSG00000004462 Tbccd1 5730478M09Rik|AU015083|BB165076 TBCC domain containing 1 protein-coding common_peak2_48_430_-0.474667822178414_8.51421014799989_4.54531517393427 chr16 24504309 24506024 + 4.54531517393427 NA intron (NM_001145952, intron 2 of 11) intron (NM_001145952, intron 2 of 11) -24148 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo unique_peak2_23_210_-0.707323720615091_7.36743732839964_4.54462535763485-2 chrX 20797895 20799064 + 4.54462535763485 NA Intergenic Intergenic -50064 NM_009703 11836 Mm.220946 NM_009703 ENSMUSG00000001127 Araf 1200013E08Rik|A-Raf|AW495444|Araf1 Araf proto-oncogene, serine/threonine kinase protein-coding unique_peak2_23_210_-0.707323720615091_7.36743732839964_4.54462535763485 chr15 101257647 101258637 + 4.54462535763485 NA Intergenic Intergenic -8704 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding common_peak1_106_640_0.334789872737032_9.49157548298726_4.54314899774905 chr13 92610182 92611628 + 4.54314899774905 NA promoter-TSS (NM_172588) promoter-TSS (NM_172588) -233 NM_172588 218442 Mm.297970 NM_172588 ENSMUSG00000021703 Serinc5 A130038L21Rik|AIGP3|C86123|TPO1 serine incorporator 5 protein-coding common_peak2_47_203_0.567962437306957_7.95640656062497_4.54282432549207 chr1 128607384 128608891 + 4.54282432549207 NA Intergenic Intergenic -15838 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_103_616_0.339519187864227_9.43888627308153_4.54273074819104 chr8 84256643 84257717 + 4.54273074819104 NA TTS (NM_026350) TTS (NM_026350) 144 NM_026423 67873 Mm.278085 NM_026423 ENSMUSG00000004996 Mri1 2410018C20Rik methylthioribose-1-phosphate isomerase 1 protein-coding common_peak1_43_385_-0.506046983387773_8.33943354557419_4.54241210419873 chr11 32580574 32581566 + 4.54241210419873 NA intron (NM_009288, intron 4 of 18) intron (NM_009288, intron 4 of 18) 47804 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_397_3662_0.144784119325216_11.9112020453712_4.54169638950395 chr16 55819086 55823056 + 4.54169638950395 NA intron (NM_001159395, intron 2 of 12) intron (NM_001159395, intron 2 of 12) 1067 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak2_197_1989_-0.210485940430491_10.8533097452158_4.54120141304168 chr11 121235875 121238378 + 4.54120141304168 NA promoter-TSS (NM_026272) promoter-TSS (NM_026272) -110 NM_026272 67608 Mm.291832 NM_026272 ENSMUSG00000000056 Narf 4430402O11Rik nuclear prelamin A recognition factor protein-coding common_peak2_116_724_0.315240780858849_9.65945757533172_4.54082164927476 chr6 145211116 145212094 + 4.54082164927476 NA promoter-TSS (NM_177222) promoter-TSS (NM_177222) 458 NM_133688 67636 Mm.486359 NM_133688 ENSMUSG00000040370 Lyrm5 4930469P12Rik|AL022899|Etfrf1|Ghiso LYR motif containing 5 protein-coding common_peak2_153_1496_-0.244524654098994_10.4255961790089_4.54071691500716 chr10 39400644 39404986 + 4.54071691500716 NA intron (NM_001122892, intron 2 of 12) MTC|LTR|ERVL-MaLR 33016 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_112_690_0.322977597784142_9.59403069928033_4.54051288951295 chr8 25069703 25071458 + 4.54051288951295 NA intron (NM_031257, intron 3 of 11) intron (NM_031257, intron 3 of 11) 31231 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_40_160_0.630526386950809_7.64618007159002_4.54029989901571 chr11 78037514 78038505 + 4.54029989901571 NA promoter-TSS (NM_001284227) promoter-TSS (NM_001284227) 68 NM_008028 14252 Mm.130227 NM_008028 ENSMUSG00000061981 Flot2 AI573412|Esa|reggie-2 flotillin 2 protein-coding common_peak1_40_160_0.630526386950809_7.64618007159002_4.54029989901571-2 chr2 74825666 74826463 + 4.54029989901571 NA intron (NM_016804, intron 1 of 9) CpG 252 NM_016804 53375 Mm.292613 NM_016804 ENSMUSG00000027099 Mtx2 1500012G02Rik metaxin 2 protein-coding common_peak1_40_160_0.630526386950809_7.64618007159002_4.54029989901571 chr11 120915602 120916581 + 4.54029989901571 NA intron (NM_027745, intron 3 of 18) ERVL-int|LTR|ERVL 16781 NM_027745 71276 Mm.275751 NM_027745 ENSMUSG00000048445 Ccdc57 4933434G05Rik coiled-coil domain containing 57 protein-coding common_peak1_27_244_-0.650073188984646_7.61160134451025_4.5395867000177 chr18 49979703 49980348 + 4.5395867000177 NA intron (NM_001177759, intron 1 of 1) intron (NM_001177759, intron 1 of 1) 598 NM_001177759 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding common_peak1_59_283_0.485521624279379_8.39250793164437_4.53829776893038-2 chr5 24604226 24605184 + 4.53829776893038 NA Intergenic CpG -2703 NM_025891 66993 Mm.436539 NM_025891 ENSMUSG00000028949 Smarcd3 1500001J14Rik|2210409C08Rik|BAF60C SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding common_peak1_59_283_0.485521624279379_8.39250793164437_4.53829776893038 chr17 6270364 6271125 + 4.53829776893038 NA intron (NM_001033178, intron 1 of 16) CpG 274 NM_001033178 77106 Mm.381893 NM_001033178 ENSMUSG00000038141 Tmem181a 5930418K15Rik|C76977|Gpr178|Tmem181|mKIAA1423 transmembrane protein 181A protein-coding common_peak1_88_496_0.375916327201901_9.14506020516324_4.53826224596942 chr10 13868169 13869729 + 4.53826224596942 NA promoter-TSS (NM_025446) promoter-TSS (NM_025446) -119 NM_025446 66253 Mm.45755 NM_025446 ENSMUSG00000019806 Aig1 1500031O19Rik|AV064870|AW413422|CGI-103 androgen-induced 1 protein-coding common_peak1_20_54_0.996114930273838_6.27941717866158_4.53801660257948-2 chr2 76370433 76370825 + 4.53801660257948 NA intron (NM_153405, intron 1 of 9) intron (NM_153405, intron 1 of 9) 645 NM_153405 241490 Mm.33310 NM_153405 ENSMUSG00000042369 Rbm45 Drb1|Drbp1|G430095G15Rik RNA binding motif protein 45 protein-coding common_peak1_20_54_0.996114930273838_6.27941717866158_4.53801660257948 chr13 110395114 110395572 + 4.53801660257948 NA exon (NM_152804, exon 1 of 14) exon (NM_152804, exon 1 of 14) 299 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo-like kinase 2 protein-coding common_peak2_115_716_0.316058628183377_9.64385862279359_4.53769482356738 chr10 21295232 21297027 + 4.53769482356738 NA 5' UTR (NM_019702, exon 1 of 18) 5' UTR (NM_019702, exon 1 of 18) 150 NM_001145209 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak1_156_1079_0.260660037354818_10.2071456157282_4.53676930389743 chr2 31688047 31689227 + 4.53676930389743 NA promoter-TSS (NM_001283046) promoter-TSS (NM_001283046) 100 NM_001283046 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak1_110_674_0.325174475426502_9.56133092965144_4.53646712467969 chr2 181592016 181593414 + 4.53646712467969 NA promoter-TSS (NM_001164597) promoter-TSS (NM_001164597) -254 NM_001164597 269401 Mm.386888 NM_001164597 ENSMUSG00000000823 Zfp512b Gm632|Znf512b zinc finger protein 512B protein-coding common_peak1_37_331_-0.548062916763679_8.10100797296509_4.53482009159845 chr7 64141582 64142243 + 4.53482009159845 NA Intergenic Intergenic -11923 NM_001039104 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak1_51_458_-0.460316787586519_8.61219194962055_4.53415158349291 chr1 138164577 138165752 + 4.53415158349291 NA intron (NM_001268286, intron 2 of 28) T-rich|Low_complexity|Low_complexity 9962 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_18_45_1.07680224733988_6.06196307972695_4.53376582127148 chr11 95332530 95332971 + 4.53376582127148 NA Intergenic B1F1|SINE|Alu -4268 NM_172543 215512 Mm.262113 NM_172543 ENSMUSG00000038893 Fam117a 5730593F17Rik|AW548096 family with sequence similarity 117, member A protein-coding unique_peak1_18_45_1.07680224733988_6.06196307972695_4.53376582127148-2 chr15 36364603 36365075 + 4.53376582127148 NA Intergenic Intergenic -81692 NM_013923 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak1_18_45_1.07680224733988_6.06196307972695_4.53376582127148-4 chr7 45051857 45052347 + 4.53376582127148 NA intron (NM_175022, intron 1 of 13) intron (NM_175022, intron 1 of 13) 779 NM_175022 233210 Mm.219137 NM_175022 ENSMUSG00000046574 Prr12 6720469B10|BC058674 proline rich 12 protein-coding unique_peak1_18_45_1.07680224733988_6.06196307972695_4.53376582127148 chr1 21329973 21330425 + 4.53376582127148 NA Intergenic RSINE1|SINE|B4 -19478 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_18_45_1.07680224733988_6.06196307972695_4.53376582127148-3 chr6 50385188 50385610 + 4.53376582127148 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -2562 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_18_45_1.07680224733988_6.06196307972695_4.53376582127148-2 chr16 52127000 52127412 + 4.53376582127148 NA intron (NM_001033238, intron 4 of 17) intron (NM_001033238, intron 4 of 17) 95657 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak2_182_1324_0.236877322862332_10.4902153057691_4.53350798025643 chr19 8870600 8872741 + 4.53350798025643 NA intron (NM_146093, intron 1 of 9) CpG 111 NM_146093 225896 Mm.27839 NM_146093 ENSMUSG00000071655 Ubxn1 2B28|4930455J02Rik|D19Ertd721e|T25529 UBX domain protein 1 protein-coding unique_peak2_30_270_-0.615466836619564_7.77441562304409_4.53345968645432 chr11 75169679 75171198 + 4.53345968645432 NA promoter-TSS (NM_010430) promoter-TSS (NM_010430) -183 NM_010430 15248 Mm.57250 NM_010430 ENSMUSG00000043099 Hic1 AA408311|HIC-1 hypermethylated in cancer 1 protein-coding common_peak1_170_1210_0.246650086009129_10.3653081926989_4.53341978533922 chr4 150568991 150570998 + 4.53341978533922 NA intron (NM_001085492, intron 11 of 22) CpG 82180 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak2_219_2243_-0.197341319850166_11.0331863006837_4.53329857250622 chr9 123527325 123530801 + 4.53329857250622 NA promoter-TSS (NM_030692) promoter-TSS (NM_030692) -819 NM_030692 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding common_peak2_68_346_0.443803467668534_8.66069358641253_4.53231758324846 chr4 120668818 120670663 + 4.53231758324846 NA Intergenic Intergenic 3177 NM_019563 56222 Mm.272646 NM_019563 ENSMUSG00000070803 Cited4 MRG-2|Mrg2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 protein-coding common_peak1_39_349_-0.533464573015197_8.18447882532473_4.53094880827306 chr17 86123559 86124451 + 4.53094880827306 NA intron (NM_030133, intron 7 of 20) MTA_Mm|LTR|ERVL-MaLR 21170 NM_030133 78586 Mm.146236 NM_030133 ENSMUSG00000024135 Srbd1 AI461933|C85414|D530025C17Rik S1 RNA binding domain 1 protein-coding common_peak1_166_1639_-0.232733493817486_10.5631133525967_4.53037509352125 chr9 57076304 57077780 + 4.53037509352125 NA intron (NM_001110350, intron 1 of 20) CpG 666 NM_011378 20466 Mm.15755 NM_011378 ENSMUSG00000042557 Sin3a AW553200|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) protein-coding common_peak1_36_137_0.671259194433241_7.44415405399479_4.52989277696548-3 chr4 150593826 150594447 + 4.52989277696548 NA intron (NM_001085492, intron 12 of 22) (TTTTG)n|Simple_repeat|Simple_repeat 58038 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_36_137_0.671259194433241_7.44415405399479_4.52989277696548 chr1 72225987 72226524 + 4.52989277696548 NA Intergenic U2|snRNA|snRNA -13948 NM_001005423 381269 Mm.422636 NM_001005423 ENSMUSG00000039395 Mreg Gm974|Wdt2|dsu melanoregulin protein-coding common_peak1_36_137_0.671259194433241_7.44415405399479_4.52989277696548-2 chr14 69707102 69707604 + 4.52989277696548 NA 5' UTR (NM_001301652, exon 1 of 7) 5' UTR (NM_001301652, exon 1 of 7) 140 NM_001301652 71843 Mm.27738 NM_001146012 ENSMUSG00000034194 R3hcc1 1700020M16Rik|AA407796 R3H domain and coiled-coil containing 1 protein-coding common_peak2_133_871_0.288971686559153_9.9126701680565_4.5294835384043 chr10 52416818 52418689 + 4.5294835384043 NA exon (NM_030250, exon 1 of 5) exon (NM_030250, exon 1 of 5) 206 NM_030250 52014 Mm.199964 NM_030250 ENSMUSG00000023068 Nus1 1600027K07Rik|AU019165|AW538011|BC003223|D10Ertd438e NUS1 dehydrodolichyl diphosphate synthase subunit protein-coding common_peak1_227_2337_-0.193335872608769_11.0943912782273_4.52936612745943 chr12 4233282 4235052 + 4.52936612745943 NA exon (NM_001204912, exon 1 of 2) exon (NM_001204912, exon 1 of 2) 127 NM_134046 52504 Mm.70546 NM_134046 ENSMUSG00000020652 Cenpo 2810429O05Rik|8430427C03Rik|D12Ertd482e centromere protein O protein-coding unique_peak1_15_33_1.20879042187483_5.69185805218775_4.52747119888473 chr1 171033577 171033991 + 4.52747119888473 NA Intergenic Intergenic 14858 NM_144559 246256 Mm.251254 NM_144559 ENSMUSG00000059089 Fcgr4 4833442P21Rik|CD16-2|FcgRIV|FcgammaRIV|Fcgr3a|Fcrl3 Fc receptor, IgG, low affinity IV protein-coding common_peak2_81_442_0.396892687696765_8.9896092324034_4.52622400148079 chr3 138488159 138489478 + 4.52622400148079 NA intron (NM_175224, intron 1 of 10) intron (NM_175224, intron 1 of 10) 564 NM_175224 75624 Mm.26833 NM_175224 ENSMUSG00000005813 Metap1 1700029C17Rik|AW047992|mKIAA0094 methionyl aminopeptidase 1 protein-coding common_peak1_62_560_-0.410247800657011_8.92673306028029_4.52615416020732 chr7 141088075 141089303 + 4.52615416020732 NA intron (NM_001162924, intron 9 of 13) intron (NM_001162924, intron 9 of 13) 8920 NM_019762 56460 Mm.350037 NM_019762 ENSMUSG00000054065 Pkp3 2310056L12Rik plakophilin 3 protein-coding common_peak1_62_560_-0.410247800657011_8.92673306028029_4.52615416020732-2 chrX 7789231 7790390 + 4.52615416020732 NA promoter-TSS (NM_001290455) promoter-TSS (NM_001290455) -183 NM_001290455 54645 Mm.194811 NM_207670 ENSMUSG00000031153 Gripap1 AI854681|DXImx47e|GRASP-1|Sfc10|mKIAA1167 GRIP1 associated protein 1 protein-coding common_peak1_138_1332_-0.258476284296371_10.2512229229408_4.52564615738232 chr10 128034986 128036915 + 4.52564615738232 NA intron (NM_013608, intron 1 of 7) CpG 604 NM_001113199 17938 Mm.3746 NM_013608 ENSMUSG00000061315 Naca AL022831|AL024382|Gm1878|mKIAA0363|skNAC nascent polypeptide-associated complex alpha polypeptide protein-coding common_peak1_101_944_-0.309887430794623_9.72922680371112_4.52523360202251 chr3 136671201 136672224 + 4.52523360202251 NA intron (NM_001293622, intron 1 of 12) intron (NM_001293622, intron 1 of 12) 1646 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding common_peak1_46_412_-0.486866883993429_8.44656452942273_4.52485909490051 chr16 36940540 36941375 + 4.52485909490051 NA intron (NM_008225, intron 3 of 13) intron (NM_008225, intron 3 of 13) 5974 NM_008225 15163 Mm.4091 NM_008225 ENSMUSG00000022831 Hcls1 AW213261|HS1 hematopoietic cell specific Lyn substrate 1 protein-coding common_peak1_55_494_-0.438107653762691_8.73223088808563_4.5236768348816 chr15 80948048 80948929 + 4.5236768348816 NA promoter-TSS (NM_009634) promoter-TSS (NM_009634) -2 NM_009634 11564 Mm.38151 NM_009634 ENSMUSG00000022407 Adsl Adl|Asl adenylosuccinate lyase protein-coding common_peak2_144_970_0.273441415971698_10.060048193405_4.52233820325988 chr11 106271955 106273873 + 4.52233820325988 NA promoter-TSS (NM_001130187) promoter-TSS (NM_001130187) 58 NM_001130187 83796 Mm.21772 NM_031878 ENSMUSG00000078619 Smarcd2 AW322457|Baf60b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding common_peak2_50_223_0.540315855069853_8.07751284959253_4.52220259397725 chr17 84890610 84892041 + 4.52220259397725 NA Intergenic Intergenic -65416 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding unique_peak2_50_223_0.540315855069853_8.07751284959253_4.52220259397725 chr15 72865150 72866827 + 4.52220259397725 NA intron (NM_001164642, intron 16 of 16) intron (NM_001164642, intron 16 of 16) -55664 NR_002864 353342 Mm.440245 NR_002864 ENSMUSG00000106847 Peg13 - paternally expressed 13 ncRNA common_peak2_69_353_0.440452475626893_8.68783178789644_4.52199515408927 chr11 114889175 114890843 + 4.52199515408927 NA promoter-TSS (NM_170758) promoter-TSS (NM_170758) -32 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding common_peak1_147_1429_-0.248791158081628_10.3574038526249_4.52013404826359 chr17 36019565 36021136 + 4.52013404826359 NA intron (NM_008207, intron 1 of 5) B1_Mur2|SINE|Alu 210 NM_008207 15042 Mm.439654 NM_008207 ENSMUSG00000053835 H2-T24 H-2T24 histocompatibility 2, T region locus 24 protein-coding common_peak1_103_965_-0.30723351182213_9.76226262292471_4.51947532067105 chr2 37358277 37359568 + 4.51947532067105 NA intron (NM_026176, intron 1 of 3) intron (NM_026176, intron 1 of 3) 410 NM_026176 67466 Mm.30709 NM_026176 ENSMUSG00000009030 Pdcl 1200011E13Rik|AW108059|PhLP1 phosducin-like protein-coding common_peak2_116_1099_-0.286209842650877_9.96018288708658_4.51938779447959 chr10 128231026 128232915 + 4.51938779447959 NA promoter-TSS (NM_001164080) promoter-TSS (NM_001164080) -93 NM_001164080 21853 Mm.6458 NM_011589 ENSMUSG00000039994 Timeless C77407|Debt69|tim timeless circadian clock 1 protein-coding common_peak1_26_235_-0.660435482522247_7.55242530810072_4.51905980078773 chr4 156109998 156110535 + 4.51905980078773 NA intron (NM_177205, intron 1 of 9) CpG 268 NM_177205 230996 Mm.318925 NM_145557 ENSMUSG00000059939 9430015G10Rik - RIKEN cDNA 9430015G10 gene protein-coding unique_peak2_26_235_-0.660435482522247_7.55242530810072_4.51905980078773 chr8 13159123 13160058 + 4.51905980078773 NA intron (NM_010684, intron 1 of 8) intron (NM_010684, intron 1 of 8) 455 NM_010684 16783 Mm.16716 NM_010684 ENSMUSG00000031447 Lamp1 CD107a|LGP-120|LGP-A|Lamp-1|P2B lysosomal-associated membrane protein 1 protein-coding common_peak1_64_318_0.459501906568027_8.54716356704888_4.51890447308371 chr10 117951834 117952823 + 4.51890447308371 NA Intergenic Intergenic 26869 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA unique_peak1_17_41_1.11236793909391_5.94850139232571_4.518135330866 chr17 36082893 36083389 + 4.518135330866 NA intron (NM_008199, intron 3 of 5) intron (NM_008199, intron 3 of 5) 1108 NM_008199 14963 Mm.477808 NM_008199 ENSMUSG00000073406 H2-Bl H2-B1|H2-Bl-like histocompatibility 2, blastocyst protein-coding common_peak1_17_41_1.11236793909391_5.94850139232571_4.518135330866 chr12 102372246 102372702 + 4.518135330866 NA intron (NM_001161365, intron 6 of 9) intron (NM_001161365, intron 6 of 9) 67223 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding common_peak1_111_1047_-0.293633629146813_9.88660618696404_4.51689059103827 chr8 79028356 79029887 + 4.51689059103827 NA intron (NM_001294279, intron 1 of 14) intron (NM_001294279, intron 1 of 14) 684 NM_178267 622675 Mm.48724 NM_178267 ENSMUSG00000071064 Zfp827 2810449M09Rik|D630040G17Rik|Znf827 zinc finger protein 827 protein-coding common_peak2_167_1182_0.249077219017778_10.3327729678487_4.51634100458455 chr1 51500339 51502914 + 4.51634100458455 NA Intergenic Intergenic -23227 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak2_167_1182_0.249077219017778_10.3327729678487_4.51634100458455-2 chr5 64386188 64390774 + 4.51634100458455 NA Intergenic RLTR20C2_MM|LTR|ERVK 79461 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA common_peak2_241_2502_-0.186263419866528_11.1963108657551_4.51590366326897 chr14 55589615 55592610 + 4.51590366326897 NA promoter-TSS (NM_001029855) promoter-TSS (NM_001029855) -11 NM_001029855 19188 Mm.371573 NM_011190 ENSMUSG00000079197 Psme2 AA589371|AI788882|PA28b proteasome (prosome, macropain) activator subunit 2 (PA28 beta) protein-coding common_peak1_110_1037_-0.295672560993186_9.87175444786129_4.51525674600935 chr2 3717419 3718949 + 4.51525674600935 NA intron (NM_025626, intron 1 of 3) L1MB1|LINE|L1 4726 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_13_128_-0.951274816591684_6.53558984712741_4.51501783033178 chr2 166611806 166612231 + 4.51501783033178 NA intron (NM_177782, intron 8 of 39) intron (NM_177782, intron 8 of 39) -60700 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA unique_peak1_16_37_1.15560874753059_5.82573188720888_4.51486260054411-3 chrX 77794143 77794478 + 4.51486260054411 NA intron (NM_016979, intron 1 of 8) intron (NM_016979, intron 1 of 8) 1650 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding unique_peak1_16_37_1.15560874753059_5.82573188720888_4.51486260054411-2 chr1 144335169 144335630 + 4.51486260054411 NA Intergenic Intergenic -86295 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding unique_peak1_16_37_1.15560874753059_5.82573188720888_4.51486260054411 chr1 64305247 64305639 + 4.51486260054411 NA Intergenic Intergenic -184054 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding unique_peak2_8_88_-1.19766038028009_5.87690324082635_4.51476170683141-2 chr15 75922927 75923851 + 4.51476170683141 NA Intergenic MT2A|LTR|ERVL -1829 NM_025412 66194 Mm.250599 NM_025412 ENSMUSG00000022571 Pycrl 1110058B13Rik|2700073G24Rik pyrroline-5-carboxylate reductase-like protein-coding unique_peak2_8_88_-1.19766038028009_5.87690324082635_4.51476170683141 chr1 154007211 154007986 + 4.51476170683141 NA Intergenic PB1D7|SINE|Alu 107669 NM_008131 14645 Mm.210745 NM_008131 ENSMUSG00000026473 Glul GS|Glns glutamate-ammonia ligase (glutamine synthetase) protein-coding common_peak1_25_78_0.851640496463829_6.72960099640902_4.51439892035564-3 chr16 50430729 50431218 + 4.51439892035564 NA intron (NM_027444, intron 1 of 16) intron (NM_027444, intron 1 of 16) 1416 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding common_peak2_25_78_0.851640496463829_6.72960099640902_4.51439892035564-3 chrX 160994063 160994674 + 4.51439892035564 NA intron (NM_001024624, intron 1 of 18) CpG 313 NM_001024624 382253 Mm.443717 NM_001024624 ENSMUSG00000031292 Cdkl5 BC038161|Stk9 cyclin-dependent kinase-like 5 protein-coding common_peak2_25_78_0.851640496463829_6.72960099640902_4.51439892035564-2 chr10 14016401 14017084 + 4.51439892035564 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 50363 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_25_78_0.851640496463829_6.72960099640902_4.51439892035564 chr11 75538088 75538558 + 4.51439892035564 NA intron (NM_001199284, intron 2 of 13) intron (NM_001199284, intron 2 of 13) 6211 NM_001199283 215113 Mm.11186 NM_173388 ENSMUSG00000038178 Slc43a2 7630402D21Rik|BC042513|Lat4 solute carrier family 43, member 2 protein-coding common_peak2_25_78_0.851640496463829_6.72960099640902_4.51439892035564 chr10 7009958 7010577 + 4.51439892035564 NA intron (NM_001033391, intron 1 of 7) L1_Mus4|LINE|L1 12918 NM_001033391 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak1_25_78_0.851640496463829_6.72960099640902_4.51439892035564-2 chr11 106678114 106678675 + 4.51439892035564 NA intron (NM_001305158, intron 12 of 14) intron (NM_001305158, intron 12 of 14) 36887 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding unique_peak2_22_202_-0.726875113091666_7.30189836063934_4.51299160358774 chr9 119333810 119335243 + 4.51299160358774 NA Intergenic Intergenic 5514 NM_010851 17874 Mm.213003 NM_010851 ENSMUSG00000032508 Myd88 - myeloid differentiation primary response gene 88 protein-coding common_peak1_22_202_-0.726875113091666_7.30189836063934_4.51299160358774 chrX 102157317 102157791 + 4.51299160358774 NA promoter-TSS (NM_146235) promoter-TSS (NM_146235) -463 NM_146235 236930 Mm.31911 NM_146235 ENSMUSG00000051220 Ercc6l BC004701|D330021P09Rik excision repair cross-complementing rodent repair deficiency complementation group 6 like protein-coding common_peak2_93_536_0.360965120626963_9.24926083829889_4.51268812011745 chr8 70905312 70906925 + 4.51268812011745 NA exon (NM_173013, exon 1 of 7) exon (NM_173013, exon 1 of 7) 144 NM_173013 270058 Mm.248559 NM_173013 ENSMUSG00000019261 Map1s 6430517J16Rik|Bpy2ip1|Map8|Mtap1s|VCY2IP1 microtubule-associated protein 1S protein-coding common_peak2_57_269_0.498460028648093_8.32604561137488_4.51262441245431 chr4 115830075 115831589 + 4.51262441245431 NA intron (NM_175308, intron 1 of 3) intron (NM_175308, intron 1 of 3) 2740 NM_175308 100465 Mm.35571 NM_175308 ENSMUSG00000028709 Mob3c AW822253|D130076I06Rik|Mobkl2c MOB kinase activator 3C protein-coding common_peak2_235_1855_0.200770032286966_10.9583660112711_4.51257099367902 chr7 123123272 123124999 + 4.51257099367902 NA 5' UTR (NM_144925, exon 1 of 24) 5' UTR (NM_144925, exon 1 of 24) 250 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding common_peak1_21_193_-0.740115099493177_7.22985529244054_4.51181590238312 chr10 80624114 80624572 + 4.51181590238312 NA intron (NM_134002, intron 1 of 10) intron (NM_134002, intron 1 of 10) 1563 NM_134002 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding common_peak2_127_819_0.296610097178791_9.82778514809484_4.5115826073105 chr14 18270014 18271932 + 4.5115826073105 NA promoter-TSS (NM_025586) promoter-TSS (NM_025586) 13 NM_025586 66480 Mm.2050 NM_025586 ENSMUSG00000012405 Rpl15 2510008H07Rik ribosomal protein L15 protein-coding common_peak2_141_943_0.277128807671533_10.0212074531976_4.51117797690577 chr13 113137713 113139971 + 4.51117797690577 NA intron (NR_131045, intron 2 of 2) MLT-int|LTR|ERVL-MaLR 2766 NR_131045 76720 Mm.54263 NR_131045 1700084D21Rik - RIKEN cDNA 1700084D21 gene ncRNA common_peak2_28_93_0.794074462834931_6.9516260830951_4.51077149917082 chr7 139684132 139684711 + 4.51077149917082 NA promoter-TSS (NM_001302546) promoter-TSS (NM_001302546) -606 NM_001302546 212124 Mm.425507 NM_177212 ENSMUSG00000049571 Cfap46 9330101J02Rik|E030019B06Rik|Gm170|Ttc40 cilia and flagella associated protein 46 protein-coding common_peak1_28_93_0.794074462834931_6.9516260830951_4.51077149917082 chrX 72918566 72919151 + 4.51077149917082 NA promoter-TSS (NM_019405) promoter-TSS (NM_019405) 337 NM_010941 18194 Mm.38792 NM_010941 ENSMUSG00000031349 Nsdhl AI747449|Bpa|H105E3|Str|XAP104 NAD(P) dependent steroid dehydrogenase-like protein-coding common_peak2_42_375_-0.508861681423687_8.3001580109658_4.50931095326025 chr6 82913099 82914628 + 4.50931095326025 NA exon (NM_011350, exon 14 of 14) exon (NM_011350, exon 14 of 14) 25906 NM_001308374 20355 Mm.270543 NM_011350 ENSMUSG00000000627 Sema4f Sema W sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain protein-coding unique_peak2_34_304_-0.571219717926715_7.96705557348689_4.50905751271119 chr10 127299716 127301588 + 4.50905751271119 NA intron (NM_001003913, intron 11 of 20) intron (NM_001003913, intron 11 of 20) 9859 NM_001290183 13198 Mm.110220 NM_007837 ENSMUSG00000025408 Ddit3 CHOP-10|CHOP10|chop|gadd153 DNA-damage inducible transcript 3 protein-coding common_peak2_168_1660_-0.230022509432967_10.5828251032459_4.50833499945732 chr7 38017838 38019992 + 4.50833499945732 NA intron (NM_011274, intron 1 of 10) CpG 637 NM_011274 19777 Mm.387220 NM_011274 ENSMUSG00000030421 Uri1 C80913|NNX3|Rmp URI1, prefoldin-like chaperone protein-coding common_peak1_59_532_-0.422722978975116_8.84663023327162_4.50823487430041 chr4 133665996 133667249 + 4.50823487430041 NA intron (NM_178698, intron 2 of 3) L2|LINE|L2 6025 NM_001145955 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak1_209_1591_0.215567921319526_10.7444085812034_4.50677718471539 chr19 60579789 60581815 + 4.50677718471539 NA 5' UTR (NM_001172096, exon 1 of 8) 5' UTR (NM_001172096, exon 1 of 8) 221 NM_001172097 78832 Mm.259026 NM_030197 ENSMUSG00000033417 Cacul1 2700078E11Rik|2810417M16Rik|9830127L17Rik|AI450346|D130033C15Rik CDK2 associated, cullin domain 1 protein-coding common_peak2_126_811_0.296874776988869_9.81377330567961_4.50611767244702 chr10 80038412 80040530 + 4.50611767244702 NA intron (NM_025554, intron 1 of 6) intron (NM_025554, intron 1 of 6) 188 NM_025554 66420 Mm.18579 NM_025554 ENSMUSG00000004667 Polr2e 2410021N14Rik|25kDa|AW208866|RPB5|XAP4 polymerase (RNA) II (DNA directed) polypeptide E protein-coding common_peak2_215_2196_-0.199274654024613_11.001681827411_4.50589423832951 chr10 93450914 93455148 + 4.50589423832951 NA promoter-TSS (NM_001313897) promoter-TSS (NM_001313897) -365 NM_001313897 16993 Mm.271071 NM_008517 ENSMUSG00000015889 Lta4h - leukotriene A4 hydrolase protein-coding common_peak1_95_552_0.3558644202301_9.28906788034976_4.50585503502507 chr4 24496004 24497090 + 4.50585503502507 NA promoter-TSS (NM_199467) promoter-TSS (NM_199467) 85 NM_199467 212377 Mm.120919 NM_199467 ENSMUSG00000045751 Mms22l F730047E07Rik|Gm134 MMS22-like, DNA repair protein protein-coding common_peak1_48_210_0.555777048203499_7.99898771280894_4.50306603358619 chr13 109821537 109822608 + 4.50306603358619 NA intron (NM_011056, intron 7 of 16) intron (NM_011056, intron 7 of 16) -81737 NR_035442 100316683 NR_035442 ENSMUSG00000084651 Mir1904 Mirn1904|mmu-mir-1904 microRNA 1904 ncRNA common_peak2_260_2118_0.187764474446967_11.1430501095957_4.50207201740289 chr3 106481873 106486479 + 4.50207201740289 NA intron (NR_033207, intron 1 of 1) intron (NR_033207, intron 1 of 1) 1726 NM_001278941 72121 Mm.14816 NM_028110 ENSMUSG00000027901 Dennd2d 2010308M01Rik|AI451421 DENN/MADD domain containing 2D protein-coding unique_peak2_10_104_-1.08106008615853_6.17371547458686_4.50142582297581-2 chr6 65527685 65528499 + 4.50142582297581 NA Intergenic Lx5|LINE|L1 -62306 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding unique_peak2_10_104_-1.08106008615853_6.17371547458686_4.50142582297581 chr3 79227086 79227874 + 4.50142582297581 NA intron (NR_045502, intron 1 of 2) L1MA8|LINE|L1 14561 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak2_91_843_-0.329413762240963_9.55639230758671_4.50113157736302 chr15 58140674 58142109 + 4.50113157736302 NA promoter-TSS (NM_029734) promoter-TSS (NM_029734) -45 NM_029734 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding common_peak1_97_568_0.351203705790459_9.32788669520181_4.50073212249221 chr13 69809398 69810653 + 4.50073212249221 NA exon (NM_138596, exon 1 of 4) exon (NM_138596, exon 1 of 4) 143 NM_138596 28077 Mm.52583 NM_138596 ENSMUSG00000021598 Med10 AA959813|AI385605|C78613|D13Wsu50e mediator complex subunit 10 protein-coding common_peak1_97_568_0.351203705790459_9.32788669520181_4.50073212249221-2 chr19 33391462 33392443 + 4.50073212249221 NA intron (NM_001167818, intron 1 of 6) CpG 343 NM_001167818 67795 Mm.204591 NM_001146342 ENSMUSG00000071573 Rnls 6530404N21Rik|AI452315|AW060440|C10orf59 renalase, FAD-dependent amine oxidase protein-coding common_peak1_33_120_0.711285334885932_7.27450590471756_4.49820165925846 chr7 120982047 120982703 + 4.49820165925846 NA promoter-TSS (NM_007672) promoter-TSS (NM_007672) -63 NM_007672 12585 Mm.1640 NM_007672 ENSMUSG00000030878 Cdr2 AA617262 cerebellar degeneration-related 2 protein-coding common_peak2_99_584_0.346947000038329_9.36576631448993_4.49718735471217 chr12 110737370 110738992 + 4.49718735471217 NA exon (NM_027149, exon 1 of 3) exon (NM_027149, exon 1 of 3) 232 NM_027149 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding common_peak1_299_2540_0.172193670609026_11.3972774953579_4.49652655436023 chr11 53350116 53352441 + 4.49652655436023 NA intron (NM_033565, intron 1 of 20) CpG 511 NM_033565 93736 Mm.395281 NM_033565 ENSMUSG00000049470 Aff4 AF5Q31|Alf4|Laf4l|MCEF AF4/FMR2 family, member 4 protein-coding common_peak1_120_759_0.306711236304501_9.7232112264832_4.49613221864535 chr19 6920701 6921997 + 4.49613221864535 NA intron (NM_007953, intron 1 of 6) intron (NM_007953, intron 1 of 6) 459 NM_007953 26379 Mm.386776 NM_007953 ENSMUSG00000024955 Esrra ERRalpha|Err1|Estrra|Nr3b1 estrogen related receptor, alpha protein-coding common_peak1_75_684_-0.366371352078286_9.23677450180875_4.49586130800812-2 chr7 127448268 127449240 + 4.49586130800812 NA exon (NM_175163, exon 1 of 3) exon (NM_175163, exon 1 of 3) 404 NM_175163 71131 Mm.474533 NM_175163 ENSMUSG00000048921 Zfp689 4933416E05Rik|Znf689 zinc finger protein 689 protein-coding common_peak1_75_684_-0.366371352078286_9.23677450180875_4.49586130800812 chr15 59761886 59763002 + 4.49586130800812 NA Intergenic ORR1E|LTR|ERVL-MaLR 32515 NR_045076 100503021 Mm.402924 NR_045076 Gm19510 - predicted gene, 19510 ncRNA common_peak2_64_579_-0.402994569682038_8.97841180517392_4.4951403613204 chr9 124145176 124147317 + 4.4951403613204 NA Intergenic Intergenic 24703 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak2_60_541_-0.417629590306898_8.87333424620042_4.49429582834895 chr17 34629544 34631593 + 4.49429582834895 NA intron (NM_030890, intron 1 of 3) intron (NM_030890, intron 1 of 3) 882 NM_030890 260297 Mm.390965 NM_030890 ENSMUSG00000015476 Prrt1 Bat-4|Bat4|D17H6S54E|DSPD1|G5b|NG5|ORF31 proline-rich transmembrane protein 1 protein-coding common_peak1_36_322_-0.555606703482514_8.05758700295267_4.49425480867891-2 chr7 104291018 104291595 + 4.49425480867891 NA Intergenic Intergenic -3200 NM_001310602 667823 Mm.482375 NM_001310602 ENSMUSG00000060441 Trim5 EG667823|Gm8833 tripartite motif-containing 5 protein-coding common_peak1_36_322_-0.555606703482514_8.05758700295267_4.49425480867891 chr15 103272663 103273319 + 4.49425480867891 NA promoter-TSS (NM_019817) promoter-TSS (NM_019817) 73 NM_019817 56447 Mm.29473 NM_019817 ENSMUSG00000060992 Copz1 5930435A22Rik|AA407760|D4Ertd360e coatomer protein complex, subunit zeta 1 protein-coding common_peak2_50_448_-0.46290085761369_8.5791212059343_4.49423096434323 chr2 29787128 29788751 + 4.49423096434323 NA promoter-TSS (NM_001290496) promoter-TSS (NM_001290496) -268 NM_001290495 227682 Mm.245739 NM_145520 ENSMUSG00000039826 Trub2 G430055L02Rik TruB pseudouridine (psi) synthase family member 2 protein-coding unique_peak2_35_131_0.68690355370057_7.38784589620874_4.49417758153964 chr4 140988505 140989544 + 4.49417758153964 NA intron (NM_029097, intron 1 of 28) intron (NM_029097, intron 1 of 28) 2151 NM_001164366 74772 Mm.205625 NM_029097 ENSMUSG00000036622 Atp13a2 1110012E06Rik|AA589443 ATPase type 13A2 protein-coding common_peak2_66_332_0.451165333078462_8.60496103361049_4.49255148535961-2 chr7 101320667 101322076 + 4.49255148535961 NA promoter-TSS (NM_019990) promoter-TSS (NM_019990) 52 NM_019990 56018 Mm.28896 NM_019990 ENSMUSG00000030688 Stard10 AV048538|CGI-52|NY-C0-28|PC-TP2|PCTP2|Pctpl|Sdccag28|SdccagG28|TISP-81 START domain containing 10 protein-coding common_peak2_66_332_0.451165333078462_8.60496103361049_4.49255148535961 chr5 36483337 36484414 + 4.49255148535961 NA promoter-TSS (NM_025725) promoter-TSS (NM_025725) 410 NM_001170454 231151 Mm.421558 NM_001170454 ENSMUSG00000029196 Tada2b AA474455|Gm145 transcriptional adaptor 2B protein-coding common_peak2_136_899_0.282556365317822_9.95505937387595_4.49130768826531 chr9 94668346 94671066 + 4.49130768826531 NA promoter-TSS (NM_177909) promoter-TSS (NM_177909) -186 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak2_292_2463_0.174807122497947_11.3541901019439_4.49101390188551 chr13 43300512 43305016 + 4.49101390188551 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) 1408 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak2_116_725_0.313252227765394_9.66045185187845_4.4906359394941 chr8 84256040 84257998 + 4.4906359394941 NA TTS (NM_026350) TTS (NM_026350) 305 NM_026423 67873 Mm.278085 NM_026423 ENSMUSG00000004996 Mri1 2410018C20Rik methylthioribose-1-phosphate isomerase 1 protein-coding common_peak1_14_136_-0.915987961549178_6.64003810218594_4.48958561936861-2 chr3 52197796 52198129 + 4.48958561936861 NA Intergenic Intergenic -70375 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding unique_peak2_24_73_0.876561826507434_6.64773427888267_4.48958561936861 chr17 43666658 43667275 + 4.48958561936861 NA promoter-TSS (NM_028711) promoter-TSS (NM_028711) 49 NM_028711 74011 Mm.288697 NM_028711 ENSMUSG00000023912 Slc25a27 3632410G24Rik|9430092A03Rik|D530043E16Rik|Ucp4 solute carrier family 25, member 27 protein-coding unique_peak2_14_136_-0.915987961549178_6.64003810218594_4.48958561936861 chr13 73746747 73747928 + 4.48958561936861 NA Intergenic Intergenic -16360 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding unique_peak1_24_73_0.876561826507434_6.64773427888267_4.48958561936861 chr14 25490701 25491347 + 4.48958561936861 NA intron (NM_001310666, intron 1 of 23) MIRc|SINE|MIR 31839 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_14_136_-0.915987961549178_6.64003810218594_4.48958561936861 chr2 143837418 143837870 + 4.48958561936861 NA intron (NM_001291061, intron 5 of 7) MER5A|DNA|hAT-Charlie 25529 NM_009751 12075 Mm.275937 NM_009751 ENSMUSG00000027420 Bfsp1 CP95 beaded filament structural protein 1, in lens-CP94 protein-coding common_peak1_24_73_0.876561826507434_6.64773427888267_4.48958561936861 chr15 78605460 78606070 + 4.48958561936861 NA intron (NM_028195, intron 3 of 12) intron (NM_028195, intron 3 of 12) 8718 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak2_197_1472_0.223525059964672_10.6363042450182_4.48927964787081 chr3 146777737 146782401 + 4.48927964787081 NA intron (NM_011100, intron 1 of 9) RLTR17B_Mm|LTR|ERVK 1347 NM_001164200 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak1_57_512_-0.427539389908128_8.78904532065299_4.48909908816379 chr3 103171683 103172272 + 4.48909908816379 NA exon (NM_026602, exon 2 of 7) exon (NM_026602, exon 2 of 7) 266 NM_026602 68183 Mm.104919 NM_026602 ENSMUSG00000005687 Bcas2 6430539P16Rik|AI132645|C76366|C80030 breast carcinoma amplified sequence 2 protein-coding common_peak1_138_1331_-0.25739358627866_10.2506815739319_4.48864266528272 chr10 33950045 33951890 + 4.48864266528272 NA intron (NM_028287, intron 1 of 9) CpG 245 NM_028287 72580 Mm.248081 NM_028287 ENSMUSG00000039531 Zufsp 2700019D07Rik zinc finger with UFM1-specific peptidase domain protein-coding common_peak2_103_617_0.337182839109269_9.44005444745901_4.48834196988313 chr2 29889196 29890773 + 4.48834196988313 NA promoter-TSS (NM_013615) promoter-TSS (NM_013615) -79 NM_013615 18286 Mm.330116 NM_013615 ENSMUSG00000026790 Odf2 AI848335|MMTEST29 outer dense fiber of sperm tails 2 protein-coding common_peak2_272_2246_0.182695149693423_11.2251319840266_4.48813158025117 chr5 123377709 123383047 + 4.48813158025117 NA Intergenic B2_Mm2|SINE|B2 -14420 NM_177582 208104 Mm.83277 NM_133917 ENSMUSG00000038342 Mlxip AW228700|Mir|bHLHe36 MLX interacting protein protein-coding unique_peak2_20_185_-0.761684167309533_7.15831672745326_4.48734912494259 chr1 171101764 171103175 + 4.48734912494259 NA Intergenic (T)n|Simple_repeat|Simple_repeat -19192 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak2_111_683_0.32193685750474_9.57882094363827_4.48668808813714 chr14 14632108 14634306 + 4.48668808813714 NA Intergenic Intergenic -69818 NM_001033270 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding common_peak2_108_658_0.327607580521585_9.52793844526884_4.48648427956639 chr13 51775699 51778272 + 4.48648427956639 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 16762 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_113_700_0.317840396725908_9.61219083237358_4.48642139494432 chr10 85101707 85103859 + 4.48642139494432 NA promoter-TSS (NM_010214) promoter-TSS (NM_010214) 156 NM_001013028 103266 Mm.335025 NM_001013028 ENSMUSG00000060935 Tmem263 AI597468 transmembrane protein 263 protein-coding common_peak1_78_420_0.404422668046921_8.91988775708986_4.4863926850176 chr15 84324325 84325608 + 4.4863926850176 NA intron (NM_022321, intron 1 of 12) intron (NM_022321, intron 1 of 12) 246 NM_022321 64099 Mm.251356 NM_022321 ENSMUSG00000022439 Parvg AI413459 parvin, gamma protein-coding unique_peak2_11_111_-1.02019176515186_6.29725903948167_4.48486522873811 chr7 80554486 80555316 + 4.48486522873811 NA Intergenic Intergenic -19782 NM_001042527 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding common_peak2_70_636_-0.381990016409283_9.12415455405166_4.48394502818057 chr19 60181672 60184353 + 4.48394502818057 NA Intergenic Intergenic 38337 NR_026942 107376 Mm.245813 NR_026942 ENSMUSG00000053117 E330013P04Rik 9930018I18Rik|AW492152 RIKEN cDNA E330013P04 gene ncRNA common_peak2_70_636_-0.381990016409283_9.12415455405166_4.48394502818057-2 chr4 134158921 134161395 + 4.48394502818057 NA intron (NM_144527, intron 3 of 13) RLTR4_MM-int|LTR|ERV1 26927 NM_144527 70012 Mm.26542 NM_144527 ENSMUSG00000037443 Cep85 2410030J07Rik|AI173272|AI173504|Ccdc21 centrosomal protein 85 protein-coding common_peak1_133_872_0.287318167706639_9.91349692748276_4.48376340519248 chr11 60417233 60418904 + 4.48376340519248 NA promoter-TSS (NM_145427) promoter-TSS (NM_145427) 923 NM_025757 66771 Mm.29950 NM_025757 ENSMUSG00000018415 Gid4 4933439F18Rik GID complex subunit 4, VID24 homolog protein-coding common_peak1_191_1413_0.228045996841765_10.5795894032303_4.48342131848741 chr16 64769740 64771539 + 4.48342131848741 NA intron (NM_026273, intron 1 of 2) CpG 300 NM_026273 67609 Mm.212157 NM_026273 ENSMUSG00000059920 4930453N24Rik AI649104|din RIKEN cDNA 4930453N24 gene protein-coding unique_peak2_31_278_-0.601255737517663_7.82349344307036_4.48322798447332 chr13 19299996 19301566 + 4.48322798447332 NA Intergenic Intergenic 95032 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak2_99_923_-0.312509226906963_9.69549442796258_4.48282194728622 chr1 170276482 170278353 + 4.48282194728622 NA promoter-TSS (NM_012009) promoter-TSS (NM_012009) 93 NM_012009 26904 Mm.57009 NM_012009 ENSMUSG00000102418 Sh2d1b1 EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b SH2 domain containing 1B1 protein-coding unique_peak2_18_168_-0.800515232885294_7.00062181983954_4.48263980713562 chrX 167230731 167231965 + 4.48263980713562 NA Intergenic Intergenic -22130 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_295_3155_-0.16426090524298_11.541751037392_4.48260789800278 chr19 61199271 61200266 + 4.48260789800278 NA Intergenic Intergenic -23459 NM_001177513 633057 Mm.426097 NM_001177513 ENSMUSG00000094649 Gm7102 EG633057 predicted gene 7102 protein-coding common_peak1_202_2044_-0.205685704051072_10.8950422758036_4.48256928950761 chr2 75659146 75660576 + 4.48256928950761 NA intron (NM_146130, intron 1 of 10) CpG 571 NR_033513 627828 Mm.459502 NR_033513 ENSMUSG00000092086 Gm6793 EG627828 heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo common_peak2_223_1733_0.206513500355159_10.8631449333994_4.48148031808272 chr11 6199328 6201385 + 4.48148031808272 NA promoter-TSS (NM_173748) promoter-TSS (NM_173748) 95 NM_173748 209586 Mm.25321 NM_173748 ENSMUSG00000053838 Nudcd3 AI427847|BC024322|mKIAA1068 NudC domain containing 3 protein-coding common_peak1_41_167_0.611769532206094_7.69820218888181_4.48108833966262 chr11 83753478 83754191 + 4.48108833966262 NA exon (NM_145432, exon 1 of 20) exon (NM_145432, exon 1 of 20) 197 NM_145432 217026 Mm.117874 NM_145432 ENSMUSG00000000976 Heatr6 2700008B19Rik|BB135312|BB249351 HEAT repeat containing 6 protein-coding common_peak2_48_429_-0.471316612678775_8.51253454325007_4.48026025344121 chr18 50032428 50034266 + 4.48026025344121 NA intron (NM_001177759, intron 1 of 1) L2a|LINE|L2 -19935 NM_134131 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding common_peak2_205_1551_0.21824735277597_10.7090365185751_4.47947968135129 chr2 35687680 35691588 + 4.47947968135129 NA intron (NM_001290641, intron 3 of 15) intron (NM_001290641, intron 3 of 15) -2360 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding unique_peak2_25_227_-0.677468769523809_7.49415562940284_4.47841342689164 chr8 83996440 83998048 + 4.47841342689164 NA promoter-TSS (NM_001081415) promoter-TSS (NM_001081415) -428 NM_001081415 666704 Mm.298091 NM_001081415 ENSMUSG00000079003 Samd1 AA589507 sterile alpha motif domain containing 1 protein-coding common_peak2_37_143_0.657051513140934_7.49845075801278_4.47841342689164 chr8 94633622 94634891 + 4.47841342689164 NA intron (NM_026274, intron 6 of 14) intron (NM_026274, intron 6 of 14) 32315 NM_026274 67610 Mm.109074 NM_026274 ENSMUSG00000050079 Rspry1 4930470D19Rik|AI608258 ring finger and SPRY domain containing 1 protein-coding common_peak1_25_227_-0.677468769523809_7.49415562940284_4.47841342689164 chr17 57011590 57012084 + 4.47841342689164 NA promoter-TSS (NM_133801) promoter-TSS (NM_133801) -549 NM_133801 98053 Mm.24632 NM_133801 ENSMUSG00000002658 Gtf2f1 2810405L04Rik|C76800|RAP74 general transcription factor IIF, polypeptide 1 protein-coding common_peak1_37_143_0.657051513140934_7.49845075801278_4.47841342689164 chr12 84773179 84774000 + 4.47841342689164 NA promoter-TSS (NM_023409) promoter-TSS (NM_023409) 319 NM_028863 74316 Mm.25719 NM_028863 ENSMUSG00000021241 Isca2 0710001C05Rik|5730594E03Rik|Hbld1 iron-sulfur cluster assembly 2 protein-coding common_peak1_25_227_-0.677468769523809_7.49415562940284_4.47841342689164-2 chr5 144254600 144255155 + 4.47841342689164 NA promoter-TSS (NM_018772) promoter-TSS (NM_018772) -348 NM_018772 55950 Mm.38011 NM_018772 ENSMUSG00000047843 Bri3 I3 brain protein I3 protein-coding common_peak1_28_252_-0.634330260181742_7.66582844460344_4.47803385549221 chr3 96629939 96630405 + 4.47803385549221 NA promoter-TSS (NR_003619) promoter-TSS (NR_003619) 244 NM_001102407 60365 Mm.261972 NM_025875 ENSMUSG00000038374 Rbm8a 2310057C03Rik|AA673428|Rbm8 RNA binding motif protein 8a protein-coding common_peak1_88_497_0.373016436696107_9.14651015041613_4.47773551911936 chr1 72254252 72255306 + 4.47773551911936 NA Intergenic CpG 29535 NM_023523 111175 Mm.281738 NM_023523 ENSMUSG00000026189 Pecr 2400003B18Rik|TERP peroxisomal trans-2-enoyl-CoA reductase protein-coding common_peak1_71_645_-0.377480370448545_9.14665016946965_4.47773551911916 chr7 135580977 135581840 + 4.47773551911916 NA intron (NM_001316678, intron 1 of 19) intron (NM_001316678, intron 1 of 19) -12073 NM_001316680 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_106_994_-0.299582296075238_9.80876156739339_4.47740224818734 chr17 83513819 83514835 + 4.47740224818734 NA promoter-TSS (NM_001159529) promoter-TSS (NM_001159529) 6 NM_009187 20463 Mm.30072 NM_009187 ENSMUSG00000024248 Cox7a2l COX7AR|COX7RP|EB1|SIG-81|SIG81|Silg81 cytochrome c oxidase subunit VIIa polypeptide 2-like protein-coding common_peak1_55_256_0.507552512010403_8.25940080519908_4.47710023978666 chr11 101070130 101070740 + 4.47710023978666 NA exon (NM_013792, exon 1 of 6) exon (NM_013792, exon 1 of 6) 341 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding common_peak1_15_144_-0.883655826889767_6.73808117657005_4.4754736426528-3 chr2 158707272 158707679 + 4.4754736426528 NA intron (NM_153089, intron 2 of 10) intron (NM_153089, intron 2 of 10) 40340 NM_001159662 228852 Mm.150540 NM_153089 ENSMUSG00000037754 Ppp1r16b ANKRD4|C130078N17Rik|TIMAP|Wdt4 protein phosphatase 1, regulatory (inhibitor) subunit 16B protein-coding common_peak1_15_144_-0.883655826889767_6.73808117657005_4.4754736426528-4 chr5 99253067 99253444 + 4.4754736426528 NA promoter-TSS (NM_145839) promoter-TSS (NM_145839) -328 NM_145839 320292 Mm.259074 NM_145839 ENSMUSG00000089809 Rasgef1b 4732452O09Rik|GPIgamma4|Gpig4 RasGEF domain family, member 1B protein-coding common_peak1_15_144_-0.883655826889767_6.73808117657005_4.4754736426528-2 chr12 85824207 85824522 + 4.4754736426528 NA promoter-TSS (NM_001081423) promoter-TSS (NM_001081423) 181 NM_021446 58520 Mm.143795 NM_021446 ENSMUSG00000021252 0610007P14Rik 1190004E09Rik|AU019315|C77855|ORF11 RIKEN cDNA 0610007P14 gene protein-coding common_peak1_15_144_-0.883655826889767_6.73808117657005_4.4754736426528 chr11 20332824 20333233 + 4.4754736426528 NA promoter-TSS (NM_018861) promoter-TSS (NM_018861) -315 NM_018861 55963 Mm.6379 NM_018861 ENSMUSG00000020142 Slc1a4 ASCT-1|ASCT1|AW045657|SATT solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 protein-coding common_peak2_77_704_-0.361923686491938_9.28051760404019_4.47529174610975 chr2 155825738 155827179 + 4.47529174610975 NA 5' UTR (NM_010579, exon 1 of 6) 5' UTR (NM_010579, exon 1 of 6) 467 NM_010579 16418 Mm.271674 NM_010579 ENSMUSG00000027613 Eif6 1110004P11|AA408895|CAB|Itgb4bp|eIF-6|imc-415|p27(BBP)|p27BBP eukaryotic translation initiation factor 6 protein-coding common_peak1_39_155_0.632344319954884_7.60157437883969_4.47483887296727 chr3 27258284 27259046 + 4.47483887296727 NA Intergenic MuRRS-int|LTR|ERV1 -58412 NM_009425 22035 Mm.1062 NM_009425 ENSMUSG00000039304 Tnfsf10 A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Tnlg6a|Trail tumor necrosis factor (ligand) superfamily, member 10 protein-coding common_peak2_161_1582_-0.235491145957946_10.5106999671582_4.4726412093557 chr13 30617866 30621793 + 4.4726412093557 NA intron (NR_045975, intron 2 of 3) intron (NR_045975, intron 2 of 3) 4786 NR_045975 75090 Mm.292232 NR_045975 ENSMUSG00000086263 4930519D14Rik - RIKEN cDNA 4930519D14 gene ncRNA common_peak1_33_295_-0.579304793468422_7.91980096889474_4.47248903967371 chr6 124375081 124375724 + 4.47248903967371 NA Intergenic Intergenic -10916 NR_131162 72268 Mm.420740 NR_131162 1700027F06Rik - RIKEN cDNA 1700027F06 gene ncRNA common_peak2_87_802_-0.336233812450651_9.48113927129199_4.47145454136908 chr19 41911054 41913254 + 4.47145454136908 NA exon (NM_023418, exon 1 of 4) exon (NM_023418, exon 1 of 4) 283 NM_023418 18648 Mm.16783 NM_023418 ENSMUSG00000011752 Pgam1 2310050F24Rik|Pgam-1 phosphoglycerate mutase 1 protein-coding common_peak1_27_88_0.810831319051528_6.88114909049216_4.47114380353623 chr3 104219848 104220434 + 4.47114380353623 NA 5' UTR (NM_133853, exon 1 of 22) 5' UTR (NM_133853, exon 1 of 22) 265 NM_133853 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding unique_peak1_23_68_0.905251011313926_6.56114996243513_4.47077128026164 chr17 25570835 25571468 + 4.47077128026164 NA promoter-TSS (NM_011447) promoter-TSS (NM_011447) 340 NR_045176 72834 Mm.33042 NR_045176 ENSMUSG00000091475 2810468N07Rik - RIKEN cDNA 2810468N07 gene ncRNA common_peak1_23_68_0.905251011313926_6.56114996243513_4.47077128026164 chr1 43450954 43451597 + 4.47077128026164 NA intron (NM_010879, intron 1 of 4) intron (NM_010879, intron 1 of 4) 5524 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding unique_peak2_16_152_-0.85385158171848_6.83046205183341_4.47061501695316 chr5 134491166 134492040 + 4.47061501695316 NA intron (NM_001039162, intron 15 of 15) (GAAA)n|Simple_repeat|Simple_repeat -34887 NM_001081464 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding common_peak1_35_312_-0.558721173873595_8.01065825999582_4.47058919476699 chr19 8880436 8881007 + 4.47058919476699 NA exon (NM_001160356, exon 1 of 2) exon (NM_001160356, exon 1 of 2) 212 NM_001160356 107197 Mm.381181 NM_001160356 ENSMUSG00000071654 Uqcc3 AI462493|Cbp4 ubiquinol-cytochrome c reductase complex assembly factor 3 protein-coding common_peak2_35_312_-0.558721173873595_8.01065825999582_4.47058919476699 chr10 80138108 80139659 + 4.47058919476699 NA intron (NR_036582, intron 1 of 10) CpG 484 NR_036582 100503659 Mm.485395 NM_015761 ENSMUSG00000035640 Cbarp 9630008F14|Dos|R29144/1 calcium channel, voltage-dependent, beta subunit associated regulatory protein protein-coding common_peak2_73_383_0.42143346167661_8.79567923155946_4.47028828925879 chr18 39368826 39370115 + 4.47028828925879 NA intron (NM_175164, intron 22 of 22) intron (NM_175164, intron 22 of 22) 117775 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak2_172_1230_0.243595485008091_10.3874127889885_4.47026263819143 chr11 116413999 116419635 + 4.47026263819143 NA Intergenic Intergenic -3785 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_167_1648_-0.230064106079901_10.5723436303975_4.46944943787282 chr18 4351903 4354046 + 4.46944943787282 NA promoter-TSS (NM_007746) promoter-TSS (NM_007746) -21 NM_007746 26410 Mm.3275 NM_007746 ENSMUSG00000024235 Map3k8 Cot|Cot/Tpl2|Est|Estf|Tpl-2|Tpl2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding common_peak2_189_1394_0.229032694745017_10.5605657540891_4.46922724981684 chr5 129723995 129726107 + 4.46922724981684 NA promoter-TSS (NM_008095) promoter-TSS (NM_008095) -24 NM_008095 14467 Mm.12468 NM_008095 ENSMUSG00000029432 Gbas AV006093|Nipsnap2 glioblastoma amplified sequence protein-coding common_peak2_62_559_-0.407673856993185_8.92544608844837_4.46921441663667-2 chr9 66872752 66875204 + 4.46921441663667 NA intron (NM_173413, intron 1 of 7) intron (NM_173413, intron 1 of 7) -39272 NM_026674 68318 Mm.284229 NM_026674 ENSMUSG00000053040 Aph1c 0610008A10Rik|APH-1b|Aph1b aph1 homolog C, gamma secretase subunit protein-coding common_peak2_62_559_-0.407673856993185_8.92544608844837_4.46921441663667-3 chrX 75082870 75085807 + 4.46921441663667 NA intron (NM_181584, intron 1 of 9) intron (NM_181584, intron 1 of 9) 567 NM_181584 210710 Mm.267056 NM_181584 ENSMUSG00000032750 Gab3 5930433H21Rik growth factor receptor bound protein 2-associated protein 3 protein-coding common_peak2_62_559_-0.407673856993185_8.92544608844837_4.46921441663667 chr8 71950362 71951806 + 4.46921441663667 NA promoter-TSS (NM_001164581) promoter-TSS (NM_001164581) 18 NM_001164581 234413 Mm.334607 NM_001164581 ENSMUSG00000052446 Zfp961 A230105L22Rik|BC065788|mszf37|mszf55-2 zinc finger protein 961 protein-coding common_peak1_63_311_0.464075666635631_8.51744005218006_4.46888155656062 chr8 12671541 12672708 + 4.46888155656062 NA promoter-TSS (NM_198031) promoter-TSS (NM_198031) -24 NM_198031 259279 Mm.142095 NM_198031 ENSMUSG00000000759 Tubgcp3 GCP3|Spc98p tubulin, gamma complex associated protein 3 protein-coding common_peak2_245_1961_0.194080766185827_11.0351497093122_4.46830554634585 chr6 120462706 120465737 + 4.46830554634585 NA intron (NM_008359, intron 1 of 12) intron (NM_008359, intron 1 of 12) 1024 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak1_129_838_0.290999831079429_9.85802691597954_4.4672756856883 chr4 134767140 134768185 + 4.4672756856883 NA intron (NM_145554, intron 1 of 8) CpG 342 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak2_143_1385_-0.252189246705479_10.3106169187845_4.46698357698062 chr7 44815085 44817450 + 4.46698357698062 NA promoter-TSS (NM_030693) promoter-TSS (NM_030693) -103 NM_001171024 100328588 Mm.2565 NM_001171024 ENSMUSG00000074141 Gm21948 Nup62-il4i1 predicted gene, 21948 protein-coding unique_peak1_30_104_0.752436687068184_7.09046386120021_4.46671831702816 chr2 22744548 22745150 + 4.46671831702816 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -29478 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak1_30_104_0.752436687068184_7.09046386120021_4.46671831702816-2 chr9 44538331 44538845 + 4.46671831702816 NA Intergenic Intergenic -12167 NM_007551 12145 Mm.6246 NM_007551 ENSMUSG00000047880 Cxcr5 Blr1|CXC-R5|CXCR-5|Gpcr6|MDR15 chemokine (C-X-C motif) receptor 5 protein-coding unique_peak2_30_104_0.752436687068184_7.09046386120021_4.46671831702816 chr2 32158369 32159305 + 4.46671831702816 NA intron (NM_001159634, intron 1 of 31) intron (NM_001159634, intron 1 of 31) 7689 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak1_30_104_0.752436687068184_7.09046386120021_4.46671831702816 chr16 76366986 76367676 + 4.46671831702816 NA intron (NM_173440, intron 1 of 3) intron (NM_173440, intron 1 of 3) 5718 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak1_88_812_-0.334093173310839_9.50006495541961_4.4666784327915 chr17 36001290 36002654 + 4.4666784327915 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) 7468 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA common_peak2_401_3713_0.14253242755394_11.9300243137124_4.4652738152731 chr18 7867721 7871154 + 4.4652738152731 NA 5' UTR (NM_001146298, exon 1 of 13) 5' UTR (NM_001146298, exon 1 of 13) 240 NM_153085 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding common_peak2_44_185_0.587019826456601_7.83266872433633_4.46494747417776 chr4 116149894 116150998 + 4.46494747417776 NA promoter-TSS (NM_001290658) promoter-TSS (NM_001290658) -72 NM_029786 68273 Mm.196045 NM_026651 ENSMUSG00000028700 Pomgnt1 0610016I07Rik|4930467B06Rik protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase protein-coding common_peak1_72_655_-0.375232978232455_9.16993551550186_4.4648608606183 chr7 127181007 127181743 + 4.4648608606183 NA Intergenic Intergenic 14702 NM_001285907 70233 Mm.28050 NM_027353 ENSMUSG00000042502 Cd2bp2 1500011B02Rik|2410024K20Rik|AW048183 CD2 antigen (cytoplasmic tail) binding protein 2 protein-coding common_peak1_127_820_0.294851784906431_9.82866430423102_4.46454186281225 chr7 44985803 44986696 + 4.46454186281225 NA promoter-TSS (NR_045266) promoter-TSS (NR_045266) 171 NM_001252476 15469 Mm.27545 NM_019830 ENSMUSG00000109324 Prmt1 6720434D09Rik|AW214366|Hrmt1l2|Mrmt1 protein arginine N-methyltransferase 1 protein-coding common_peak1_142_1374_-0.253025556716956_10.2987031249409_4.46370119933156 chrX 7898387 7900180 + 4.46370119933156 NA promoter-TSS (NM_011591) promoter-TSS (NM_011591) -14 NM_001252529 54633 Mm.14616 NM_019478 ENSMUSG00000031157 Pqbp1 PQBP-1|Sfc2|npw38 polyglutamine binding protein 1 protein-coding common_peak1_41_366_-0.515549297858358_8.26186160391403_4.46355417615837 chrX 8251833 8252522 + 4.46355417615837 NA 5' UTR (NM_001290430, exon 1 of 13) 5' UTR (NM_001290430, exon 1 of 13) 229 NM_133991 54632 Mm.327529 NM_133991 ENSMUSG00000031171 Ftsj1 AI931847|Ftsj|Ftsjl|Sfc12 FtsJ RNA methyltransferase homolog 1 (E. coli) protein-coding unique_peak2_24_218_-0.68877186746479_7.43040112586878_4.46330084773782 chr2 91835195 91836237 + 4.46330084773782 NA intron (NM_001080754, intron 12 of 18) MTD|LTR|ERVL-MaLR -86473 NM_007699 12672 Mm.330405 NM_007699 ENSMUSG00000040495 Chrm4 Chrm-4|M4 cholinergic receptor, muscarinic 4 protein-coding common_peak1_24_218_-0.68877186746479_7.43040112586878_4.46330084773782 chr4 117126393 117126894 + 4.46330084773782 NA promoter-TSS (NR_024078) promoter-TSS (NR_024078) -170 NM_175030 242646 Mm.358914 NM_175030 ENSMUSG00000047671 Tctex1d4 4833401D15Rik Tctex1 domain containing 4 protein-coding common_peak1_24_218_-0.68877186746479_7.43040112586878_4.46330084773782-2 chr7 30559247 30559710 + 4.46330084773782 NA 5' UTR (NM_029377, exon 1 of 9) 5' UTR (NM_029377, exon 1 of 9) 168 NM_029377 75660 Mm.379242 NM_029377 ENSMUSG00000036845 Lin37 1810054G18Rik lin-37 homolog (C. elegans) protein-coding common_peak1_81_443_0.393639709901677_8.99123572130094_4.46223153226514 chr2 91202300 91203245 + 4.46223153226514 NA promoter-TSS (NM_007387) promoter-TSS (NM_007387) -140 NM_007387 11432 Mm.45570 NM_007387 ENSMUSG00000002103 Acp2 Acp-2|LAP acid phosphatase 2, lysosomal protein-coding unique_peak2_37_330_-0.543710892223971_8.09883196069523_4.46086361127634 chr18 89205802 89207630 + 4.46086361127634 NA intron (NM_001039149, intron 2 of 5) L1_Mus1|LINE|L1 9289 NM_001039149 225825 Mm.139293 NM_178687 ENSMUSG00000034028 Cd226 BC051526|DNAM-1|DNAM1|Pta1|TLiSA1 CD226 antigen protein-coding common_peak2_37_330_-0.543710892223971_8.09883196069523_4.46086361127634 chr4 127243702 127244528 + 4.46086361127634 NA intron (NM_030252, intron 1 of 1) intron (NM_030252, intron 1 of 1) 331 NM_030252 80284 Mm.139607 NM_030252 ENSMUSG00000042380 Smim12 BC003266 small integral membrane protein 12 protein-coding unique_peak2_37_330_-0.543710892223971_8.09883196069523_4.46086361127634-2 chr4 144995051 144996705 + 4.46086361127634 NA intron (NM_001276465, intron 67 of 69) ID_B1|SINE|B4 102741 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_52_465_-0.448444379211168_8.6399639550487_4.46002913620028 chr2 180257327 180257962 + 4.46002913620028 NA TTS (NR_037274) TTS (NR_037274) 108 NR_037274 100526556 NR_037274 ENSMUSG00000092827 Mir3091 mir-3091|mmu-mir-3091 microRNA 3091 ncRNA common_peak2_39_348_-0.52933668739252_8.18241488251339_4.45893602922254 chr8 14992851 14994039 + 4.45893602922254 NA intron (NM_172751, intron 27 of 28) ORR1F|LTR|ERVL-MaLR -17580 NM_029116 74901 Mm.46675 NM_029116 ENSMUSG00000055675 Kbtbd11 2900016B01Rik|4930465M17Rik|mKIAA0711 kelch repeat and BTB (POZ) domain containing 11 protein-coding common_peak2_59_284_0.480450634731955_8.39504342641808_4.45841478146674 chr11 5706913 5708102 + 4.45841478146674 NA exon (NM_026080, exon 2 of 4) exon (NM_026080, exon 2 of 4) 192 NM_026080 64660 Mm.7328 NM_026080 ENSMUSG00000020477 Mrps24 3110030K20Rik|AI414579|Rpms24 mitochondrial ribosomal protein S24 protein-coding common_peak2_63_568_-0.402806956808702_8.95088136390223_4.45797604660165 chr12 76085222 76087806 + 4.45797604660165 NA intron (NM_001005510, intron 99 of 115) intron (NM_001005510, intron 99 of 115) 90745 NM_010157 13983 Mm.2561 NM_010157 ENSMUSG00000021055 Esr2 ER[b]|ERbeta|Estrb estrogen receptor 2 (beta) protein-coding common_peak1_140_1352_-0.254680520397233_10.2746058637779_4.45749511084125 chr9 120126920 120128401 + 4.45749511084125 NA promoter-TSS (NM_011029) promoter-TSS (NM_011029) -106 NM_011029 16785 Mm.4071 NM_011029 ENSMUSG00000032518 Rpsa 67kDa|67lr|AL022858|Lamr|Lamr1|Lamrl1|MLR|P40|P40-3|P40-8 ribosomal protein SA protein-coding common_peak1_149_1449_-0.245075165426272_10.3792996021892_4.45682134995749 chr5 67846612 67848371 + 4.45682134995749 NA promoter-TSS (NM_001284345) promoter-TSS (NM_001284345) -60 NM_009727 11980 Mm.153230 NM_009727 ENSMUSG00000037685 Atp8a1 AI481521|AI853962|APLT|AW743152|AW822227|Atp3a2|B230107D19Rik|ClassI ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 protein-coding common_peak2_207_2101_-0.202288775762177_10.9364025660811_4.4547451184008 chr19 4810135 4812641 + 4.4547451184008 NA exon (NM_019869, exon 1 of 3) exon (NM_019869, exon 1 of 3) 246 NM_001290127 102902673 Mm.426069 NM_001290127 ENSMUSG00000096370 Gm21992 Rbm14-rbm4 predicted gene 21992 protein-coding common_peak2_197_1473_0.22254596590545_10.6367937920478_4.45423403448835 chr11 98491948 98496169 + 4.45423403448835 NA intron (NM_011771, intron 3 of 7) B4|SINE|B4 47224 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak2_81_742_-0.349162824286813_9.36263698839519_4.45420068048695 chr5 107900484 107901777 + 4.45420068048695 NA intron (NM_016980, intron 1 of 7) intron (NM_016980, intron 1 of 7) 602 NM_016980 100503670 Mm.277897 NM_016980 ENSMUSG00000058558 Rpl5 U21RNA ribosomal protein L5 protein-coding common_peak1_251_2619_-0.180517314100319_11.2650924393747_4.45417388791108 chr17 36031395 36033325 + 4.45417388791108 NA exon (NM_010398, exon 2 of 7) exon (NM_010398, exon 2 of 7) 341 NM_010398 15040 Mm.439648 NM_010398 ENSMUSG00000067212 H2-T23 37b|37c|H-2T23|H2-Qa1|Qa-1|Qa-1(b)|Qa1|Qed-1|T18c|T18c(37)|T23b|T23d histocompatibility 2, T region locus 23 protein-coding common_peak2_344_3048_0.156580472115365_11.6524106710674_4.45272681890465 chr5 145113479 145117461 + 4.45272681890465 NA intron (NM_023142, intron 1 of 9) B1_Mus2|SINE|Alu 1214 NM_023142 11867 Mm.30010 NM_023142 ENSMUSG00000029622 Arpc1b 41kDa|AA408064|AA408534|AA571392|AF007010|AW208418|L72|SOP2Hs|p41-ARC actin related protein 2/3 complex, subunit 1B protein-coding common_peak1_23_209_-0.700470049574028_7.36401049287911_4.45197026205574-2 chr6 65612069 65612601 + 4.45197026205574 NA intron (NM_001001495, intron 6 of 7) MTC|LTR|ERVL-MaLR 21937 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak1_23_209_-0.700470049574028_7.36401049287911_4.45197026205574 chr16 32608480 32608941 + 4.45197026205574 NA promoter-TSS (NM_011638) promoter-TSS (NM_011638) -186 NM_011638 22042 Mm.28683 NM_011638 ENSMUSG00000022797 Tfrc 2610028K12Rik|CD71|E430033M20Rik|Mtvr1|TFR|TFR1|TR|Trfr|p90 transferrin receptor protein-coding common_peak2_68_616_-0.386531358902623_9.07586099969811_4.45176917261971 chr2 79126082 79128425 + 4.45176917261971 NA Intergenic Intergenic -128173 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_30_269_-0.610133392316525_7.77174890089257_4.45169254287177 chr11 117872875 117873606 + 4.45169254287177 NA exon (NM_027919, exon 1 of 7) exon (NM_027919, exon 1 of 7) 286 NM_027919 71776 Mm.3200 NM_027919 ENSMUSG00000017713 Tha1 1300017K07Rik|GLY1 threonine aldolase 1 protein-coding common_peak2_75_398_0.413343889547258_8.84691688099597_4.44995104699713 chrX 7761985 7763764 + 4.44995104699713 NA 5' UTR (NM_172472, exon 1 of 10) 5' UTR (NM_172472, exon 1 of 10) 213 NM_172472 209446 Mm.249142 NM_172472 ENSMUSG00000000134 Tfe3 F830016E06Rik|Tcfe3|Tfe-3|bHLHe33 transcription factor E3 protein-coding common_peak1_59_531_-0.420013691717129_8.84527558964263_4.44995104699713 chr14 66218964 66219752 + 4.44995104699713 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -5806 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding unique_peak2_7_80_-1.27020905094581_5.70474547741172_4.44877858779212-2 chr5 115019844 115020573 + 4.44877858779212 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 8684 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding unique_peak2_7_80_-1.27020905094581_5.70474547741172_4.44877858779212 chr11 120519343 120519892 + 4.44877858779212 NA Intergenic PB1D7|SINE|Alu -11110 NM_008101 14527 Mm.22329 NM_008101 ENSMUSG00000025127 Gcgr GR glucagon receptor protein-coding unique_peak2_74_674_-0.368593983648527_9.21444670011393_4.44839031136602 chr8 3515176 3517487 + 4.44839031136602 NA intron (NM_015801, intron 1 of 33) intron (NM_015801, intron 1 of 33) 947 NM_015801 50767 Mm.23085 NM_015801 ENSMUSG00000004565 Pnpla6 AI661849|MSws|Nte patatin-like phospholipase domain containing 6 protein-coding common_peak1_136_900_0.280954260721321_9.9558604261742_4.44650479314833 chr10 128804696 128806084 + 4.44650479314833 NA promoter-TSS (NM_028873) promoter-TSS (NM_028873) -286 NM_028873 74330 Mm.296915 NM_028873 ENSMUSG00000025354 Dnajc14 5730551F12Rik|DNAJ|DRIP78|HDJ3|LIP6 DnaJ heat shock protein family (Hsp40) member C14 protein-coding common_peak2_96_561_0.350912043142483_9.30988234179217_4.44633304774762 chr18 33213250 33215410 + 4.44633304774762 NA promoter-TSS (NM_133774) promoter-TSS (NM_133774) -514 NM_133774 170459 Mm.127058 NM_133774 ENSMUSG00000024378 Stard4 4632419C16Rik|9030213J02Rik StAR-related lipid transfer (START) domain containing 4 protein-coding common_peak2_42_173_0.602783674405223_7.74433533305134_4.44616267966637-2 chr17 83977518 83978560 + 4.44616267966637 NA Intergenic Intergenic -20513 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak2_42_173_0.602783674405223_7.74433533305134_4.44616267966637 chr15 96728257 96729551 + 4.44616267966637 NA Intergenic Intergenic -29206 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_42_173_0.602783674405223_7.74433533305134_4.44616267966637 chr15 75940748 75941570 + 4.44616267966637 NA 5' UTR (NM_030199, exon 1 of 2) 5' UTR (NM_030199, exon 1 of 2) 207 NM_030199 78834 Mm.273264 NM_030199 ENSMUSG00000050846 Zfp623 2610029D06Rik|AI847036 zinc finger protein 623 protein-coding common_peak2_69_625_-0.381960821222728_9.09903843632125_4.44466277134399 chr11 4134931 4136203 + 4.44466277134399 NA intron (NM_027859, intron 1 of 8) intron (NM_027859, intron 1 of 8) 407 NM_027859 71673 Mm.240586 NM_027859 ENSMUSG00000003581 Rnf215 0610009J22Rik|AW557025|C77903 ring finger protein 215 protein-coding common_peak1_97_569_0.348670439044936_9.32915332857457_4.44439048721793 chr2 130450035 130451083 + 4.44439048721793 NA intron (NM_008980, intron 1 of 21) CpG 281 NM_001163688 19262 Mm.224246 NM_008980 ENSMUSG00000027303 Ptpra Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha protein tyrosine phosphatase, receptor type, A protein-coding common_peak2_95_882_-0.319269537183658_9.62663485905664_4.44413396249785 chr1 173630001 173632659 + 4.44413396249785 NA intron (NM_175026, intron 1 of 6) intron (NM_175026, intron 1 of 6) 471 NM_175026 236312 Mm.447 NM_175026 ENSMUSG00000043263 Ifi209 4930422C14|AI447904|Ifix|Pyhin-1|Pyhin1 interferon activated gene 209 protein-coding common_peak2_238_1888_0.197697527704209_10.9822557502405_4.44389750118433 chr12 69411053 69414796 + 4.44389750118433 NA Intergenic Intergenic 40774 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak2_64_319_0.454986425445535_8.54942130761013_4.44366112139708 chr7 126272462 126273411 + 4.44366112139708 NA 5' UTR (NM_145587, exon 1 of 4) 5' UTR (NM_145587, exon 1 of 4) 317 NM_145587 104175 Mm.29660 NM_145587 ENSMUSG00000042978 Sbk1 Sbk SH3-binding kinase 1 protein-coding unique_peak2_4_56_-1.59498040890668_5.0353998097114_4.44353284653604 chr10 35711442 35711874 + 4.44353284653604 NA Intergenic Intergenic -795149 NM_001253355 319415 Mm.332442 NM_001081208 ENSMUSG00000044499 Hs3st5 D930005L05Rik|Gm1151|Hs3ost5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 protein-coding unique_peak2_32_115_0.719338952533308_7.21765047139423_4.44307695046009 chr13 14021701 14022781 + 4.44307695046009 NA intron (NR_130788, intron 3 of 16) MMVL30-int|LTR|ERV1 17397 NR_130788 70430 Mm.260209 NM_178337 ENSMUSG00000039233 Tbce 2610206D02Rik|C530005D02Rik|pmn tubulin-specific chaperone E protein-coding common_peak1_96_892_-0.317178001757814_9.64392736424232_4.44230278098581 chr2 147010427 147011925 + 4.44230278098581 NA Intergenic Intergenic -1884 NM_011917 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding unique_peak1_12_22_1.40524697739756_5.22618544475579_4.4414568823056-2 chr15 73594532 73594988 + 4.4414568823056 NA intron (NM_001033219, intron 2 of 7) intron (NM_001033219, intron 2 of 7) 1766 NM_001168255 106068 Mm.212813 NM_001033219 ENSMUSG00000079020 Slc45a4 9330175B01Rik|AW552276 solute carrier family 45, member 4 protein-coding unique_peak1_12_22_1.40524697739756_5.22618544475579_4.4414568823056 chr1 165852991 165853281 + 4.4414568823056 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 64455 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak2_180_1793_-0.219756859442899_10.6990857451978_4.44106561917274 chr2 163994351 163996283 + 4.44106561917274 NA 5' UTR (NM_018753, exon 1 of 6) 5' UTR (NM_018753, exon 1 of 6) 120 NM_018753 54401 Mm.34319 NM_018753 ENSMUSG00000018326 Ywhab 1300003C17Rik|14-3-3b tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide protein-coding common_peak1_118_1118_-0.280921950736749_9.98753334560802_4.4405235735447 chr2 114143751 114145474 + 4.4405235735447 NA intron (NM_001290788, intron 14 of 33) intron (NM_001290788, intron 14 of 33) 5958 NR_105968 102465982 NR_105968 ENSMUSG00000098464 Mir7002 Gm27429|mmu-mir-7002 microRNA 7002 ncRNA common_peak1_83_762_-0.34483998066332_9.40311925650287_4.44030841743185 chr17 46162354 46163660 + 4.44030841743185 NA intron (NM_019581, intron 1 of 11) intron (NM_019581, intron 1 of 11) 1975 NM_001145979 56055 Mm.22147 NM_019581 ENSMUSG00000023952 Gtpbp2 nmf205 GTP binding protein 2 protein-coding common_peak1_234_2416_-0.187765083461246_11.145119216035_4.43996586444781 chr13 98813980 98816121 + 4.43996586444781 NA intron (NM_172591, intron 1 of 25) CpG 399 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak1_276_2291_0.179828720290624_11.2523056889022_4.43715768892399 chr17 8282636 8284720 + 4.43715768892399 NA promoter-TSS (NM_018819) promoter-TSS (NM_018819) -135 NM_018819 55951 Mm.288510 NM_018819 ENSMUSG00000023861 Mpc1 0610006G08Rik|3830411I18Rik|Brp44l mitochondrial pyruvate carrier 1 protein-coding common_peak1_85_474_0.380555778221995_9.08206159232931_4.43647572049516 chr6 122800889 122802233 + 4.43647572049516 NA Intergenic CpG -18623 NM_021899 60611 Mm.87142 NM_021899 ENSMUSG00000003154 Foxj2 Fhx forkhead box J2 protein-coding common_peak1_364_4024_-0.144348454625392_11.9025988405766_4.43618790575637 chr10 79983289 79986400 + 4.43618790575637 NA promoter-TSS (NM_001003949) promoter-TSS (NM_001003949) -514 NM_001003949 216157 Mm.29442 NM_001003949 ENSMUSG00000013858 Tmem259 AC087114.7gm2|ORF61|R32184_3|mFLJ00277 transmembrane protein 259 protein-coding common_peak1_237_1878_0.197935330005944_10.974717016423_4.43557382498591 chr9 15044015 15046619 + 4.43557382498591 NA 5' UTR (NM_019482, exon 1 of 5) 5' UTR (NM_019482, exon 1 of 5) 161 NM_019482 55991 Mm.142253 NM_019482 ENSMUSG00000031934 Panx1 AI847747 pannexin 1 protein-coding common_peak1_115_1087_-0.285574904365058_9.94467538906781_4.43521190178918 chr1 128416264 128417653 + 4.43521190178918 NA intron (NM_145507, intron 1 of 3) CpG 458 NM_177445 226414 Mm.28693 NM_145507 ENSMUSG00000026356 Dars 5730439G15Rik aspartyl-tRNA synthetase protein-coding common_peak1_34_126_0.692761027751368_7.33506520064785_4.43512282192151 chr2 166976199 166977001 + 4.43512282192151 NA intron (NM_001291160, intron 1 of 11) intron (NM_001291160, intron 1 of 11) -11883 NR_111895 20853 Mm.73276 NM_011490 ENSMUSG00000039536 Stau1 5830401L18Rik|AW549911|C85792|Stau staufen (RNA binding protein) homolog 1 (Drosophila) protein-coding common_peak1_26_83_0.829890144060834_6.80726249480918_4.43501215566189 chr5 105730744 105731432 + 4.43501215566189 NA intron (NM_178701, intron 1 of 2) intron (NM_178701, intron 1 of 2) 30278 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_109_1024_-0.293504864820537_9.85465576198254_4.43434922353024 chr11 19919351 19921093 + 4.43434922353024 NA Intergenic CpG -4220 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak2_102_610_0.336519313958009_9.42328822679773_4.43412374027755 chr11 70198598 70201621 + 4.43412374027755 NA Intergenic Intergenic -13801 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak1_12_119_-0.978081662153942_6.41784976453155_4.43258663795343 chr1 153617932 153618327 + 4.43258663795343 NA Intergenic L1_Mus3|LINE|L1 -34908 NM_026380 67792 Mm.379143 NM_026380 ENSMUSG00000042671 Rgs8 6530413N01Rik regulator of G-protein signaling 8 protein-coding common_peak2_50_224_0.533889585910419_8.08072598417225_4.43254211802032 chr11 20830477 20831742 + 4.43254211802032 NA promoter-TSS (NM_173752) promoter-TSS (NM_173752) -1 NM_173752 216551 Mm.76694 NM_173752 ENSMUSG00000042363 Lgalsl 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla lectin, galactoside binding-like protein-coding common_peak2_110_1035_-0.292890120321859_9.87036322752563_4.4317165760533 chrX 74281327 74283686 + 4.4317165760533 NA promoter-TSS (NM_001290738) promoter-TSS (NM_001290738) -173 NM_001172154 69537 Mm.20169 NM_027109 ENSMUSG00000019088 Dnase1l1 2310005K03Rik|AI324885|Dnase1ll|Dnasex|Dnl1ll|G4.8 deoxyribonuclease 1-like 1 protein-coding common_peak1_38_149_0.64412475911198_7.55088107005187_4.43165253238852 chr4 32288015 32288676 + 4.43165253238852 NA Intergenic Intergenic -129090 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak2_38_149_0.64412475911198_7.55088107005187_4.43165253238852 chr3 144715678 144716886 + 4.43165253238852 NA intron (NM_001282037, intron 1 of 10) intron (NM_001282037, intron 1 of 10) 4053 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak2_57_270_0.493126584345054_8.3287123335264_4.43096567036045 chr8 107449104 107450869 + 4.43096567036045 NA intron (NM_025830, intron 1 of 23) intron (NM_025830, intron 1 of 23) 13588 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak1_65_326_0.450785433349154_8.57853954217266_4.43086830717985 chr11 29373382 29374344 + 4.43086830717985 NA promoter-TSS (NM_176841) promoter-TSS (NM_176841) -309 NM_176841 108686 Mm.338284 NM_176841 ENSMUSG00000032740 Ccdc88a A430106J12Rik|AI848406|Ape|C130096N06Rik|C330012F17Rik|D130005J21Rik|Girdin|Giv|Grdn|Hkrp1 coiled coil domain containing 88A protein-coding common_peak1_65_326_0.450785433349154_8.57853954217266_4.43086830717985-2 chr11 57800852 57801482 + 4.43086830717985 NA promoter-TSS (NM_001081168) promoter-TSS (NM_001081168) 300 NR_131042 76516 Mm.28485 NR_131042 ENSMUSG00000087165 2010001A14Rik - RIKEN cDNA 2010001A14 gene ncRNA common_peak1_65_587_-0.395740085989127_9.0018023018418_4.42983670885292 chr15 43282047 43282778 + 4.42983670885292 NA intron (NM_008388, intron 1 of 12) CpG 324 NM_008388 16341 Mm.289992 NM_008388 ENSMUSG00000022336 Eif3e 48kDa|Eif3s6|Int6|eIF3-p46|eIF3-p48 eukaryotic translation initiation factor 3, subunit E protein-coding common_peak2_57_511_-0.424724374301075_8.78763781284946_4.42983172568256 chr15 10981104 10982473 + 4.42983172568256 NA promoter-TSS (NM_008537) promoter-TSS (NM_008537) 32 NM_008537 17117 Mm.2787 NM_008537 ENSMUSG00000022244 Amacr Macr1 alpha-methylacyl-CoA racemase protein-coding common_peak1_86_482_0.376918451830079_9.10433860475081_4.42963103958535 chr16 49800782 49802227 + 4.42963103958535 NA Intergenic MLT1B|LTR|ERVL-MaLR -54150 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_324_2821_0.162517834613951_11.5437611899042_4.42785208886462 chr7 102209020 102211539 + 4.42785208886462 NA promoter-TSS (NM_001287164) promoter-TSS (NM_001287164) -56 NM_001291358 233575 Mm.302013 NM_145583 ENSMUSG00000030990 Pgap2 1810006G21Rik|C76649|Frag1 post-GPI attachment to proteins 2 protein-coding common_peak2_171_1691_-0.225562060493287_10.6117328228733_4.42503799688384 chr11 117967885 117970965 + 4.42503799688384 NA promoter-TSS (NM_007707) promoter-TSS (NM_007707) -59 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_77_414_0.40258823455993_8.89826164351425_4.42415964630337 chr2 154436471 154437184 + 4.42415964630337 NA intron (NM_001285446, intron 1 of 10) CpG 343 NM_009823 12396 Mm.29914 NM_009823 ENSMUSG00000038533 Cbfa2t2 A430091M07|C330013D05Rik|Cbfa2t2h|MTGR1 core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) protein-coding common_peak1_87_801_-0.334436061388256_9.48024039576079_4.42412889178863 chr6 35538940 35540033 + 4.42412889178863 NA intron (NM_008098, intron 1 of 3) CpG 402 NM_008098 14489 Mm.182746 NM_008098 ENSMUSG00000029840 Mtpn 5033418D15Rik|Gcdp|V1 myotrophin protein-coding common_peak2_309_2654_0.166903957107467_11.4579481242452_4.42390253661338 chr10 84575230 84578183 + 4.42390253661338 NA promoter-TSS (NM_146008) promoter-TSS (NM_146008) -241 NM_146008 216198 Mm.296142 NM_146008 ENSMUSG00000020034 Tcp11l2 E430026E19Rik t-complex 11 (mouse) like 2 protein-coding common_peak2_87_490_0.373443150751971_9.12630078969068_4.42338215941074 chr13 51741501 51743632 + 4.42338215941074 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 51181 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding unique_peak2_29_260_-0.619249563972182_7.71828121458379_4.42187933867312 chr2 78973989 78975910 + 4.42187933867312 NA Intergenic RMER20B|LTR|ERVK 105902 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_45_401_-0.485978575899063_8.4080624032294_4.42181928980033 chr1 52845022 52845735 + 4.42181928980033 NA intron (NM_146108, intron 1 of 13) intron (NM_146108, intron 1 of 13) 340 NM_146108 227095 Mm.222063 NM_146108 ENSMUSG00000041426 Hibch 2610509I15Rik|HIBYL-COA-H 3-hydroxyisobutyryl-Coenzyme A hydrolase protein-coding common_peak2_140_1351_-0.253613832702881_10.2740725199307_4.42106283959444 chr6 54847979 54852657 + 4.42106283959444 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 33402 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak2_274_2895_-0.17044928181897_11.4146212461737_4.42095051108786 chr18 65380076 65383604 + 4.42095051108786 NA intron (NM_001037294, intron 1 of 12) intron (NM_001037294, intron 1 of 12) 12048 NM_001037294 225638 Mm.296528 NM_001037294 ENSMUSG00000032845 Alpk2 Gm549|Hak alpha-kinase 2 protein-coding common_peak1_274_2895_-0.17044928181897_11.4146212461737_4.42095051108786 chr16 92819664 92823008 + 4.42095051108786 NA intron (NM_001111022, intron 2 of 6) B1F|SINE|Alu 4738 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_54_483_-0.437572218888679_8.70007712783026_4.42064336646076 chr19 37558948 37559821 + 4.42064336646076 NA intron (NM_175353, intron 1 of 21) RSINE1|SINE|B4 8966 NM_175353 107371 Mm.24865 NM_175353 ENSMUSG00000053799 Exoc6 4833405E05Rik|AW413330|C430002C19|Sec15|Sec15l1|hbd|msec15 exocyst complex component 6 protein-coding common_peak1_239_2475_-0.185302233057492_11.1811444826855_4.4203871393328 chr9 110655695 110658604 + 4.4203871393328 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 646 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_524_6162_-0.115731258213472_12.5315514466619_4.41924028381308 chr18 39136157 39143386 + 4.41924028381308 NA intron (NM_175164, intron 10 of 22) ID2|SINE|ID 146626 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_22_201_-0.719750678658285_7.29833614342265_4.4189015324157 chr2 79127384 79127861 + 4.4189015324157 NA Intergenic Intergenic -127804 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak2_148_1437_-0.244922958331676_10.3673864812735_4.41747983270806 chr3 88830289 88833202 + 4.41747983270806 NA intron (NR_015498, intron 1 of 1) intron (NR_015498, intron 1 of 1) 742 NR_015498 319830 Mm.400394 NR_015498 1500004A13Rik 5430404N14Rik|BB132176 RIKEN cDNA 1500004A13 gene ncRNA common_peak1_21_192_-0.732659294574129_7.22612738998102_4.41561063943748 chr18 67873311 67873635 + 4.41561063943748 NA intron (NM_027556, intron 41 of 45) ORR1E|LTR|ERVL-MaLR -59784 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak2_21_192_-0.732659294574129_7.22612738998102_4.41561063943748-2 chr4 82848248 82849571 + 4.41561063943748 NA intron (NM_026647, intron 2 of 8) L2c|LINE|L2 10752 NM_026647 68268 Mm.32047 NM_026647 ENSMUSG00000028403 Zdhhc21 9130404H11Rik|AL024349|D130004H04Rik|dep zinc finger, DHHC domain containing 21 protein-coding unique_peak2_21_192_-0.732659294574129_7.22612738998102_4.41561063943748 chr10 78069046 78070067 + 4.41561063943748 NA intron (NM_015790, intron 1 of 6) CpG 188 NM_015790 50723 Mm.17819 NM_015790 ENSMUSG00000000732 Icosl AU044799|B7-H2|B7RP-1|B7h|BG071784|GI50|GL50|GL50-B|ICOS-L|Icoslg|LICOS|Ly115l|mKIAA0653 icos ligand protein-coding common_peak1_334_2935_0.159013034184833_11.5991427699356_4.4150085362835 chr11 103261822 103265545 + 4.4150085362835 NA intron (NM_016896, intron 1 of 15) intron (NM_016896, intron 1 of 15) 3718 NM_016896 53859 Mm.158981 NM_016896 ENSMUSG00000020941 Map3k14 Nik|aly mitogen-activated protein kinase kinase kinase 14 protein-coding common_peak2_163_1147_0.249760960762451_10.2897874070569_4.41436528195762 chr15 100727649 100729964 + 4.41436528195762 NA intron (NM_172451, intron 1 of 11) intron (NM_172451, intron 1 of 11) 570 NM_001161767 207839 Mm.22969 NM_172451 ENSMUSG00000037280 Galnt6 4632410F13|AW047994|GalNAc-T6 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 protein-coding common_peak1_22_64_0.916092991065056_6.48041430856098_4.41310580451782-2 chr18 60596043 60596507 + 4.41310580451782 NA exon (NM_177340, exon 3 of 3) exon (NM_177340, exon 3 of 3) -4559 NM_133363 170947 Mm.159257 NM_133363 ENSMUSG00000049173 Myoz3 4833419K08Rik|Fatz-3 myozenin 3 protein-coding unique_peak1_22_64_0.916092991065056_6.48041430856098_4.41310580451782 chr15 6570621 6571234 + 4.41310580451782 NA Intergenic Intergenic -8920 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_22_64_0.916092991065056_6.48041430856098_4.41310580451782 chr10 19176762 19177258 + 4.41310580451782 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 9772 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_62_558_-0.405095312891408_8.92415681639749_4.41260888071581 chr4 15957775 15958707 + 4.41260888071581 NA intron (NM_013752, intron 1 of 15) CpG 274 NM_013752 27354 Mm.20866 NM_013752 ENSMUSG00000028224 Nbn Nbs1 nibrin protein-coding common_peak1_72_654_-0.373032070039184_9.16883506140522_4.41256638766601-2 chr4 86712582 86713704 + 4.41256638766601 NA Intergenic Intergenic -35412 NM_184088 329877 Mm.273718 NM_184088 ENSMUSG00000038024 Dennd4c 1700065A05Rik|AA420392 DENN/MADD domain containing 4C protein-coding common_peak1_72_654_-0.373032070039184_9.16883506140522_4.41256638766601 chr19 41341989 41342938 + 4.41256638766601 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 42607 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding unique_peak2_48_211_0.548955782347486_8.00239834573694_4.41092705398378 chr19 25001990 25003490 + 4.41092705398378 NA intron (NM_028785, intron 1 of 47) intron (NM_028785, intron 1 of 47) 3211 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak2_273_2260_0.180204590969687_11.2328475722364_4.41087332571534 chr1 43462329 43468560 + 4.41087332571534 NA intron (NM_010879, intron 1 of 4) intron (NM_010879, intron 1 of 4) 19693 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_298_3189_-0.161874989483888_11.5584032139103_4.41042294953978 chr5 124033987 124035827 + 4.41042294953978 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -2647 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_266_2798_-0.173542886655444_11.3639243282452_4.41020005675849 chr5 73284710 73286725 + 4.41020005675849 NA Intergenic RSINE1|SINE|B4 -1533 NR_040688 72276 Mm.271215 NR_040687 ENSMUSG00000100175 1700025M24Rik - RIKEN cDNA 1700025M24 gene ncRNA common_peak2_124_795_0.297496158471054_9.78537269977918_4.40989135164374 chr8 31167731 31169522 + 4.40989135164374 NA promoter-TSS (NM_026453) promoter-TSS (NM_026453) 98 NM_026453 67920 Mm.289818 NM_026453 ENSMUSG00000031578 Mak16 2600016B03Rik|AI314911|Rbm13 MAK16 homolog protein-coding common_peak2_366_3303_0.150096761527376_11.7650463521831_4.40868209716228 chr10 59895974 59902148 + 4.40868209716228 NA Intergenic Intergenic 19470 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_51_456_-0.454016799230782_8.60904195544268_4.40861262080543 chr17 63370389 63371405 + 4.40861262080543 NA intron (NM_015794, intron 5 of 8) intron (NM_015794, intron 5 of 8) -57924 NR_130176 414079 Mm.444282 NR_130176 ENSMUSG00000090565 4930405O22Rik - RIKEN cDNA 4930405O22 gene ncRNA common_peak2_72_377_0.420076602164556_8.77228072530335_4.40806545648868 chr5 124213189 124215772 + 4.40806545648868 NA intron (NM_011256, intron 2 of 24) intron (NM_011256, intron 2 of 24) -15245 NR_045369 75927 Mm.410803 NR_045369 ENSMUSG00000090220 Pitpnm2os1 4930568K20Rik phosphatidylinositol transfer protein, membrane-associated 2, opposite strand 1 ncRNA common_peak2_90_514_0.363916420649467_9.19038683239531_4.40795062138351 chr6 113623463 113624947 + 4.40795062138351 NA exon (NM_009507, exon 1 of 3) exon (NM_009507, exon 1 of 3) 184 NM_009507 22346 Mm.29407 NM_009507 ENSMUSG00000033933 Vhl Vhlh von Hippel-Lindau tumor suppressor protein-coding common_peak1_90_514_0.363916420649467_9.19038683239531_4.40795062138351 chr14 78848703 78849709 + 4.40795062138351 NA promoter-TSS (NM_027906) promoter-TSS (NM_027906) 28 NM_173758 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding common_peak1_21_59_0.952907147085432_6.38334416915123_4.40701615396816 chr4 106958454 106958871 + 4.40701615396816 NA intron (NM_198438, intron 4 of 16) intron (NM_198438, intron 4 of 16) 47192 NM_023672 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak2_136_1308_-0.257911825410382_10.2252934692401_4.40618796893793 chr7 100589375 100592025 + 4.40618796893793 NA intron (NR_003559, intron 1 of 7) intron (NR_003559, intron 1 of 7) -7570 NM_198831 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e mitochondrial ribosomal protein L48 protein-coding unique_peak2_6_72_-1.3564844312348_5.51158234326262_4.40608248780024 chr12 108003637 108004190 + 4.40608248780024 NA promoter-TSS (NM_021399) promoter-TSS (NM_021399) -499 NM_021399 58208 Mm.392694 NM_021399 ENSMUSG00000048251 Bcl11b 9130430L19Rik|AI604821|B630002E05Rik|BCL-11B|Ctip2|Rit1 B cell leukemia/lymphoma 11B protein-coding common_peak1_43_383_-0.498552446840849_8.33568627730073_4.4054979882385 chr1 192604291 192605306 + 4.4054979882385 NA intron (NM_144881, intron 9 of 11) intron (NM_144881, intron 9 of 11) 166421 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak1_81_741_-0.34721980036902_9.36166547643629_4.40511151468836 chr13 95617369 95618617 + 4.40511151468836 NA intron (NM_010169, intron 1 of 1) CpG 440 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding common_peak1_91_522_0.361018290219281_9.21117628135658_4.40383268654852 chr7 99857837 99859088 + 4.40383268654852 NA promoter-TSS (NM_001164258) promoter-TSS (NM_001164258) 421 NM_025668 66624 Mm.30043 NM_025668 ENSMUSG00000035227 Spcs2 5730406I15Rik|AA408713|mKIAA0102 signal peptidase complex subunit 2 homolog (S. cerevisiae) protein-coding common_peak1_93_861_-0.321800660476724_9.59064372885074_4.40324087189997 chr17 84844556 84846071 + 4.40324087189997 NA Intergenic ID4_|SINE|ID -54527 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak1_31_277_-0.596075498411983_7.82090332351752_4.40310685673859 chr11 100738427 100738817 + 4.40310685673859 NA promoter-TSS (NM_024456) promoter-TSS (NM_024456) -407 NM_001305003 19345 Mm.29829 NM_024456 ENSMUSG00000019173 Rab5c AI326010|Rabl RAB5C, member RAS oncogene family protein-coding common_peak1_55_492_-0.43226677517363_8.7293104487911_4.40289797966936 chrX 75514354 75515213 + 4.40289797966936 NA intron (NM_011692, intron 1 of 5) intron (NM_011692, intron 1 of 5) 486 NM_011692 22327 Mm.8294 NM_011692 ENSMUSG00000031197 Vbp1 VBP-1 von Hippel-Lindau binding protein 1 protein-coding common_peak2_146_991_0.266814442677093_10.0876035317254_4.40232905305873 chr7 126883596 126885478 + 4.40232905305873 NA 5' UTR (NM_001163774, exon 1 of 19) 5' UTR (NM_001163774, exon 1 of 19) 430 NM_001163775 381921 Mm.259634 NM_001163774 ENSMUSG00000059981 Taok2 1110033K02Rik|B230344N16|MAP3K17|PSK|PSK1|TAO1|TAO2|mKIAA0881 TAO kinase 2 protein-coding common_peak2_73_384_0.417681326815503_8.79755529899002_4.40204909538335 chr18 38995840 38997927 + 4.40204909538335 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 3738 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak2_161_1129_0.250847336876685_10.2675307257409_4.40132598169346 chr16 20716156 20718917 + 4.40132598169346 NA promoter-TSS (NM_009900) promoter-TSS (NM_009900) -290 NM_145632 245841 Mm.288730 NM_145632 ENSMUSG00000021018 Polr2h - polymerase (RNA) II (DNA directed) polypeptide H protein-coding common_peak2_51_231_0.524052560699716_8.12000727547743_4.40129179797848 chr8 83779190 83780764 + 4.40129179797848 NA Intergenic Intergenic -38666 NM_001163031 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak2_265_2174_0.183712938225264_11.1786561547361_4.40061563467477 chr12 102876781 102879237 + 4.40061563467477 NA intron (NM_172806, intron 1 of 11) CpG 397 NM_172806 238386 Mm.63456 NM_172806 ENSMUSG00000041702 Btbd7 5730507E09Rik|8030448M07|E130118E17Rik|FUP1|mKIAA1525 BTB (POZ) domain containing 7 protein-coding common_peak1_537_5400_0.117960599803373_12.4579911328537_4.40024387018693 chr17 33977965 33982079 + 4.40024387018693 NA Intergenic Intergenic -1231 NR_004446 630499 Mm.440940 NM_001081015 H2-K2 EG630499|Gm7035|H-2K1|H-2K1K|H-2K2|H2-K1 histocompatibility 2, K region locus 2 pseudo common_peak1_95_881_-0.317634755092714_9.62581746801116_4.39914219857516 chr16 22009432 22010316 + 4.39914219857516 NA intron (NM_029457, intron 1 of 16) CpG 390 NR_027488 75826 Mm.297431 NM_029457 ENSMUSG00000022855 Senp2 2310007L05Rik|4930538C18Rik|AI646780|AW554757|Smt3ip2|SuPr-1|mKIAA1331 SUMO/sentrin specific peptidase 2 protein-coding common_peak1_82_751_-0.34508298250929_9.38204736042299_4.39827222840531 chr19 46704348 46705562 + 4.39827222840531 NA Intergenic GA-rich|Low_complexity|Low_complexity -2488 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak2_82_751_-0.34508298250929_9.38204736042299_4.39827222840531 chr10 81605156 81606989 + 4.39827222840531 NA promoter-TSS (NR_030677) promoter-TSS (NR_030677) -236 NR_030677 268319 Mm.131825 NM_001033363 ENSMUSG00000074862 BC025920 - zinc finger protein pseudogene pseudo common_peak1_67_341_0.438908368460986_8.63730669911639_4.39807902294102 chr8 121200037 121201278 + 4.39807902294102 NA Intergenic IMPB_01|Satellite|Satellite 72972 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak1_52_464_-0.445345140552282_8.63841433571925_4.39807902294102 chr1 152598911 152599693 + 4.39807902294102 NA intron (NM_016846, intron 2 of 17) intron (NM_016846, intron 2 of 17) 25809 NM_016846 19731 Mm.245270 NM_016846 ENSMUSG00000026482 Rgl1 Rgl|mKIAA0959 ral guanine nucleotide dissociation stimulator,-like 1 protein-coding unique_peak2_5_64_-1.46181696730907_5.29145932937392_4.39778260092679-2 chr3 36571517 36572071 + 4.39778260092679 NA exon (NM_009828, exon 1 of 8) exon (NM_009828, exon 1 of 8) 202 NM_009828 12428 Mm.4189 NM_009828 ENSMUSG00000027715 Ccna2 AA408589|Ccn-1|Ccn1|Ccna|CycA2|Cyca cyclin A2 protein-coding unique_peak2_5_64_-1.46181696730907_5.29145932937392_4.39778260092679 chr17 6776001 6776673 + 4.39778260092679 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 6443 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak1_145_982_0.267883731231406_10.0749894719563_4.39768957809568 chr12 54861913 54863266 + 4.39768957809568 NA intron (NM_007688, intron 1 of 3) CpG 288 NM_007688 12632 Mm.276826 NM_007688 ENSMUSG00000062929 Cfl2 - cofilin 2, muscle protein-coding unique_peak2_13_127_-0.94004756116843_6.52997621941578_4.39739789037434 chr9 45259632 45260737 + 4.39739789037434 NA intron (NM_008348, intron 6 of 6) intron (NM_008348, intron 6 of 6) 6523 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak2_117_1107_-0.281603449821008_9.97294044113869_4.39707216229496-2 chr7 28692814 28695947 + 4.39707216229496 NA intron (NM_207238, intron 2 of 5) B3|SINE|B2 1236 NM_001163702 233040 Mm.116116 NM_207238 ENSMUSG00000037463 Fbxo27 E130008B10Rik|FBG5|Gm161 F-box protein 27 protein-coding common_peak2_117_1107_-0.281603449821008_9.97294044113869_4.39707216229496 chr10 12873443 12876107 + 4.39707216229496 NA Intergenic B1_Mus2|SINE|Alu -13040 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_74_673_-0.366455072892192_9.21337724473576_4.39693544584561 chr7 135591066 135592624 + 4.39693544584561 NA intron (NM_001316678, intron 1 of 19) B1_Mus1|SINE|Alu -1636 NM_001316680 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_19_175_-0.768297391006521_7.07528292313404_4.39680818975987 chr12 69227706 69228237 + 4.39680818975987 NA intron (NM_011133, intron 1 of 18) CpG 219 NM_011133 18974 Mm.9199 NM_011133 ENSMUSG00000020974 Pole2 - polymerase (DNA directed), epsilon 2 (p59 subunit) protein-coding unique_peak2_19_175_-0.768297391006521_7.07528292313404_4.39680818975987 chr18 82533844 82535111 + 4.39680818975987 NA intron (NM_010777, intron 3 of 6) intron (NM_010777, intron 3 of 6) -19986 NM_001025256 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_19_175_-0.768297391006521_7.07528292313404_4.39680818975987-2 chr8 110859748 110860325 + 4.39680818975987 NA intron (NM_001310607, intron 8 of 18) intron (NM_001310607, intron 8 of 18) 13012 NM_133973 102339 Mm.272930 NM_133973 ENSMUSG00000031753 Cog4 AW554810|D8Ertd515e component of oligomeric golgi complex 4 protein-coding common_peak1_97_901_-0.31349507515834_9.66023608567621_4.39630761309548 chr7 19227213 19228184 + 4.39630761309548 NA promoter-TSS (NM_207525) promoter-TSS (NM_207525) -691 NM_207525 403187 Mm.239583 NM_207525 ENSMUSG00000052214 Opa3 D630048P19Rik|Gm1425|Gm472 optic atrophy 3 protein-coding common_peak2_198_1996_-0.206636823596554_10.8603002056457_4.3960232889675 chr15 89074978 89079230 + 4.3960232889675 NA intron (NM_026485, intron 1 of 9) MLT1A|LTR|ERVL-MaLR 1040 NM_026485 67976 Mm.284710 NM_026485 ENSMUSG00000015363 Trabd 5730502D15Rik|AL023039 TraB domain containing protein-coding common_peak2_43_180_0.586564166797102_7.79312797048176_4.3958083169358 chr5 30678819 30679800 + 4.3958083169358 NA Intergenic MT2B2|LTR|ERVL 12423 NM_001302129 12615 Mm.290563 NM_007681 ENSMUSG00000029177 Cenpa Cenp-A centromere protein A protein-coding common_peak2_143_1383_-0.25010593220499_10.3095752615342_4.39505030601755 chr19 7216506 7218356 + 4.39505030601755 NA exon (NM_007750, exon 1 of 2) exon (NM_007750, exon 1 of 2) 185 NM_007750 12868 Mm.14022 NM_007750 ENSMUSG00000035885 Cox8a COX8L cytochrome c oxidase subunit VIIIa protein-coding common_peak2_112_1054_-0.287507785422147_9.89927339088347_4.39481880795462 chr19 21736944 21738672 + 4.39481880795462 NA Intergenic GC_rich|Low_complexity|Low_complexity -40532 NM_001033759 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_119_753_0.303460341701753_9.71015088411954_4.39423798301191 chr9 46012763 46013816 + 4.39423798301191 NA intron (NM_027498, intron 1 of 24) CpG 469 NM_027498 70661 Mm.219459 NM_027498 ENSMUSG00000034135 Sik3 5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999 SIK family kinase 3 protein-coding common_peak1_28_251_-0.628616608987349_7.66297161900624_4.39399058608586 chr6 91109651 91110139 + 4.39399058608586 NA intron (NM_018815, intron 1 of 39) ORR1G|LTR|ERVL-MaLR 6931 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding unique_peak2_28_251_-0.628616608987349_7.66297161900624_4.39399058608586 chr6 48692655 48694499 + 4.39399058608586 NA Intergenic RMER1B|Other|Other 8999 NM_174990 107526 Mm.333048 NM_174990 ENSMUSG00000054435 Gimap4 AU019574|E430007K16Rik|Ian-1|Ian1|Imap4 GTPase, IMAP family member 4 protein-coding common_peak1_28_251_-0.628616608987349_7.66297161900624_4.39399058608586-2 chr6 125086843 125087514 + 4.39399058608586 NA Intergenic PB1D10|SINE|Alu -8985 NM_145979 107932 Mm.333388 NM_145979 ENSMUSG00000063870 Chd4 9530019N15Rik|AA617397|BC005710|D6Ertd380e|Mi-2beta|mKIAA4075 chromodomain helicase DNA binding protein 4 protein-coding common_peak1_132_1265_-0.262161376765981_10.1749810010454_4.39326132292285 chr15 39111936 39113545 + 4.39326132292285 NA promoter-TSS (NM_172402) promoter-TSS (NM_172402) -24 NM_172402 69906 Mm.17875 NM_172402 ENSMUSG00000022299 Slc25a32 2610043O12Rik|Mftc solute carrier family 25, member 32 protein-coding common_peak1_63_312_0.459459038565262_8.51974836621525_4.39325829427606 chr11 59505668 59506689 + 4.39325829427606 NA non-coding (NR_015585, exon 1 of 5) non-coding (NR_015585, exon 1 of 5) 462 NM_001291014 268417 Mm.239793 NM_172941 ENSMUSG00000020472 Zkscan17 Nizp1|Zfp496|Znf496 zinc finger with KRAB and SCAN domains 17 protein-coding common_peak1_111_1044_-0.289497854577608_9.88453829967944_4.39243242611257 chr10 80560878 80561988 + 4.39243242611257 NA 5' UTR (NM_025852, exon 1 of 15) 5' UTR (NM_025852, exon 1 of 15) 127 NM_025852 66932 Mm.1116 NM_025852 ENSMUSG00000047417 Rexo1 1700021P10Rik|2610511M11Rik|AW050347|EloA-BP1|Rex1|Tceb3bp1 REX1, RNA exonuclease 1 protein-coding common_peak2_166_1176_0.245848000649515_10.3238226053632_4.39231308203587 chr10 94507506 94510118 + 4.39231308203587 NA Intergenic Intergenic -6045 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 AW488095|C630016B22Rik|C88213|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak1_59_530_-0.417299307020093_8.84391839729411_4.39201761448017 chr6 129589983 129590976 + 4.39201761448017 NA Intergenic Intergenic -1332 NM_010654 16643 Mm.391515 NM_010654 ENSMUSG00000030165 Klrd1 CD94 killer cell lectin-like receptor, subfamily D, member 1 protein-coding common_peak1_215_2192_-0.19664559627493_11.0003672985361_4.39134967438039 chr10 40348248 40350462 + 4.39134967438039 NA promoter-TSS (NM_001168304) promoter-TSS (NM_001168304) 47 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak2_102_952_-0.304784520133202_9.74394014384334_4.38943443506663 chr4 86712008 86714609 + 4.38943443506663 NA Intergenic Intergenic -35247 NM_184088 329877 Mm.273718 NM_184088 ENSMUSG00000038024 Dennd4c 1700065A05Rik|AA420392 DENN/MADD domain containing 4C protein-coding common_peak1_20_184_-0.753906816717814_7.1544280521574_4.38940838085968-3 chr6 65598419 65598907 + 4.38940838085968 NA intron (NM_001001495, intron 4 of 7) intron (NM_001001495, intron 4 of 7) 8265 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak1_20_184_-0.753906816717814_7.1544280521574_4.38940838085968-5 chr9 75435636 75436061 + 4.38940838085968 NA Intergenic Intergenic -5676 NM_001039522 235497 Mm.41508 NM_001006122 ENSMUSG00000042487 Leo1 Gm185 Leo1, Paf1/RNA polymerase II complex component protein-coding common_peak1_20_184_-0.753906816717814_7.1544280521574_4.38940838085968-2 chr11 116436211 116436612 + 4.38940838085968 NA intron (NR_003376, intron 3 of 3) intron (NR_003376, intron 3 of 3) 2198 NR_003376 664849 Mm.258466 NR_003376 Gm7367 EG664849 1110014K08Rik pseudogene pseudo common_peak1_20_184_-0.753906816717814_7.1544280521574_4.38940838085968 chr10 80751134 80751635 + 4.38940838085968 NA Intergenic ID_B1|SINE|B4 -3822 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak2_31_110_0.728449707961418_7.15864072033082_4.38940838085968 chr13 64274252 64275105 + 4.38940838085968 NA exon (NM_172587, exon 1 of 14) exon (NM_172587, exon 1 of 14) 310 NM_172587 218294 Mm.25335 NM_172587 ENSMUSG00000033102 Cdc14b 2810432N10Rik|A530086E13Rik|AA472821|CDC14B3|Cdc14B1 CDC14 cell division cycle 14B protein-coding common_peak1_31_110_0.728449707961418_7.15864072033082_4.38940838085968 chr11 57954768 57955470 + 4.38940838085968 NA Intergenic Intergenic -53945 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak1_20_184_-0.753906816717814_7.1544280521574_4.38940838085968-4 chr7 68717191 68717711 + 4.38940838085968 NA Intergenic Intergenic 31787 NM_001042592 66412 Mm.251199 NM_025549 ENSMUSG00000042659 Arrdc4 2410003C09Rik|AV216361 arrestin domain containing 4 protein-coding common_peak2_31_110_0.728449707961418_7.15864072033082_4.38940838085968-2 chr18 37883745 37884484 + 4.38940838085968 NA intron (NM_001305981, intron 18 of 28) intron (NM_001305981, intron 18 of 28) -29454 NR_105945 102465592 NR_105945 ENSMUSG00000098706 Mir6979 Gm27524|mmu-mir-6979 microRNA 6979 ncRNA unique_peak2_20_184_-0.753906816717814_7.1544280521574_4.38940838085968 chr13 55478348 55479784 + 4.38940838085968 NA intron (NM_019813, intron 8 of 13) intron (NM_019813, intron 8 of 13) -1290 NR_105909 102465569 NR_105909 ENSMUSG00000098341 Mir6944 Gm27710|mmu-mir-6944 microRNA 6944 ncRNA common_peak2_141_1361_-0.251739130978699_10.2856414225227_4.38808535531287 chr4 156030162 156033984 + 4.38808535531287 NA Intergenic Intergenic 5731 NM_021985 21936 Mm.3180 NM_009400 ENSMUSG00000041954 Tnfrsf18 AITR|Gitr tumor necrosis factor receptor superfamily, member 18 protein-coding common_peak1_37_329_-0.53934569966257_8.09664936441453_4.38744347359423 chr3 32737005 32737658 + 4.38744347359423 NA promoter-TSS (NM_029017) promoter-TSS (NM_029017) 268 NM_025316 66046 Mm.28058 NM_025316 ENSMUSG00000027673 Ndufb5 0610007D05Rik|AU015782|CI-SGDH|SGDH NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5 protein-coding common_peak1_39_347_-0.525196957031596_8.18034501733293_4.38743513184358 chrX 101273995 101274710 + 4.38743513184358 NA exon (NM_021521, exon 1 of 45) exon (NM_021521, exon 1 of 45) 261 NM_021521 59024 Mm.20873 NM_021521 ENSMUSG00000079487 Med12 230kDa|Mopa|OPA-1|Tnrc11|Trap230 mediator complex subunit 12 protein-coding common_peak1_98_578_0.344034925824928_9.3494370009017_4.38731378093414 chr6 65042479 65043507 + 4.38731378093414 NA promoter-TSS (NM_001253392) promoter-TSS (NM_001253392) -213 NM_001253392 13990 Mm.99113 NM_007958 ENSMUSG00000029920 Smarcad1 AV081750|AW226546|D6Pas1|Etl1|mKIAA1122 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding common_peak2_56_501_-0.427044834400599_8.75802113675047_4.38634900764591 chr8 95433952 95435548 + 4.38634900764591 NA 5' UTR (NM_008187, exon 1 of 6) 5' UTR (NM_008187, exon 1 of 6) 119 NM_008187 14894 Mm.2080 NM_008187 ENSMUSG00000031796 Cfap20 2600014O15Rik|AL024127|Gtl3|T10-2A2 cilia and flagella associated protein 20 protein-coding common_peak2_44_391_-0.488531206550576_8.37044424083992_4.38569413609539 chr2 155018640 155020063 + 4.38569413609539 NA intron (NM_015770, intron 1 of 3) ERVB4_1-I_MM-int|LTR|ERVK 5781 NM_015770 50518 Mm.315593 NM_015770 ENSMUSG00000027596 a A|ASIP|ASP|As nonagouti protein-coding common_peak1_109_668_0.322040928930811_9.54688286510687_4.38452261851622 chr6 71908356 71909317 + 4.38452261851622 NA promoter-TSS (NM_009088) promoter-TSS (NM_009088) -74 NM_027275 69956 Mm.30256 NM_027275 ENSMUSG00000063884 Ptcd3 2610034F17Rik|2810422B04Rik|AA589622|AU045708|MRP-S39 pentatricopeptide repeat domain 3 protein-coding common_peak1_150_1027_0.262895835791673_10.1370724670897_4.38406674007776 chr5 125139984 125141836 + 4.38406674007776 NA intron (NM_011424, intron 1 of 46) intron (NM_011424, intron 1 of 46) 38304 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak1_316_2733_0.164117430652789_11.4988562429325_4.38317757087895 chr9 96362653 96365179 + 4.38317757087895 NA intron (NM_007502, intron 1 of 6) CpG 383 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak2_110_677_0.318776704228352_9.56452981525052_4.38161644197114 chr5 105730645 105733139 + 4.38161644197114 NA intron (NM_178701, intron 1 of 2) intron (NM_178701, intron 1 of 2) 31082 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_301_2567_0.168703209049605_11.4107810916471_4.38035760525283 chr14 21830256 21832555 + 4.38035760525283 NA promoter-TSS (NM_011695) promoter-TSS (NM_011695) -156 NM_011695 22334 Mm.262327 NM_011695 ENSMUSG00000021771 Vdac2 Vdac6|mVDAC2|mVDAC6 voltage-dependent anion channel 2 protein-coding common_peak2_18_167_-0.79195321938187_6.99634081308783_4.38002106279182 chr13 21709925 21710676 + 4.38002106279182 NA Intergenic Intergenic 5843 NM_178199 319185 NM_178199 ENSMUSG00000094338 Hist1h2bl H2b-291a histone cluster 1, H2bl protein-coding unique_peak2_18_167_-0.79195321938187_6.99634081308783_4.38002106279182 chr6 34836102 34836872 + 4.38002106279182 NA intron (NM_001289656, intron 16 of 19) intron (NM_001289656, intron 16 of 19) -26659 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak2_59_285_0.475397407005671_8.39757004028122_4.37942420742942 chr1 80748575 80750466 + 4.37942420742942 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 9033 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak2_149_1018_0.263823683310211_10.1248501778209_4.37884474370327 chr15 11397307 11400476 + 4.37884474370327 NA intron (NM_033074, intron 1 of 18) intron (NM_033074, intron 1 of 18) 767 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_35_132_0.676015237557833_7.39329005428011_4.3782056955346 chr16 92779790 92780571 + 4.3782056955346 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 45894 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_180_1791_-0.218147606581242_10.698281118767_4.37800027656244 chr5 134183308 134185538 + 4.37800027656244 NA intron (NM_053266, intron 1 of 15) CpG 385 NM_053266 114674 Mm.218744 NM_053266 ENSMUSG00000015942 Gtf2ird2 1700012P16Rik GTF2I repeat domain containing 2 protein-coding common_peak1_46_199_0.559274897651293_7.92349363860037_4.37799200447878 chr4 123236903 123237874 + 4.37799200447878 NA intron (NM_013905, intron 1 of 4) intron (NM_013905, intron 1 of 4) 3832 NM_013905 56198 Mm.103615 NM_013905 ENSMUSG00000032744 Heyl Hey3|Hrt3|bHLHb33|hesr3 hairy/enhancer-of-split related with YRPW motif-like protein-coding common_peak2_46_199_0.559274897651293_7.92349363860037_4.37799200447878 chr3 101923842 101924935 + 4.37799200447878 NA promoter-TSS (NM_001039371) promoter-TSS (NM_001039371) 65 NM_001039371 242126 Mm.90204 NM_001039371 ENSMUSG00000033147 Slc22a15 2610034P21Rik|4930477M19|A530052I06Rik|BB219042 solute carrier family 22 (organic anion/cation transporter), member 15 protein-coding common_peak2_33_121_0.69941123459764_7.28044295486171_4.3771081973068 chr11 108249977 108250950 + 4.3771081973068 NA intron (NM_011101, intron 2 of 16) MIR|SINE|MIR 93425 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_47_418_-0.4704186544209_8.4755971064889_4.37701199824127 chr4 59202133 59203020 + 4.37701199824127 NA intron (NM_011673, intron 1 of 8) intron (NM_011673, intron 1 of 8) 13026 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak1_174_1723_-0.221992757687245_10.6405476802455_4.37694976256974 chr16 55636127 55638038 + 4.37694976256974 NA Intergenic Intergenic 142351 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_492_5720_-0.119656071926915_12.4222235930705_4.37624106219711 chr9 66591636 66595333 + 4.37624106219711 NA promoter-TSS (NM_001302122) promoter-TSS (NM_001302122) -369 NM_001302122 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding common_peak2_49_218_0.537840443721567_8.04370728146196_4.37612015708661 chr19 44554447 44555605 + 4.37612015708661 NA exon (NM_026061, exon 2 of 5) exon (NM_026061, exon 2 of 5) 389 NM_026061 67264 Mm.2060 NM_026061 ENSMUSG00000025204 Ndufb8 2900010I05Rik|AI987932 NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 protein-coding unique_peak2_14_135_-0.905418719838991_6.63475348133084_4.37572295713677 chrX 12014666 12015408 + 4.37572295713677 NA Intergenic Intergenic 65516 NM_175045 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_163_1148_0.248504804792026_10.2904154850421_4.37504189052713 chr14 76109918 76111509 + 4.37504189052713 NA promoter-TSS (NM_013745) promoter-TSS (NM_013745) 102 NM_026177 67467 Mm.260767 NM_026177 ENSMUSG00000022008 Gpalpp1 1200011I18Rik|Kiaa1704 GPALPP motifs containing 1 protein-coding common_peak1_65_586_-0.393284434262815_9.00057447597865_4.37484921336514 chr3 131117871 131118907 + 4.37484921336514 NA intron (NM_001276402, intron 3 of 9) intron (NM_001276402, intron 3 of 9) 5598 NM_001276403 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak1_84_468_0.378197735337116_9.06254298018393_4.37459971961777 chr1 170867193 170868171 + 4.37459971961777 NA promoter-TSS (NM_001081304) promoter-TSS (NM_001081304) 89 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding common_peak1_77_702_-0.357825118278317_9.27846831993338_4.37452996305966 chrX 164012265 164013375 + 4.37452996305966 NA intron (NM_181315, intron 2 of 7) B2_Mm2|SINE|B2 15190 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding unique_peak2_8_87_-1.18135856795099_5.8687523346618_4.37381541636593 chr3 83054815 83055418 + 4.37381541636593 NA promoter-TSS (NM_016784) promoter-TSS (NM_016784) -422 NM_016784 53317 Mm.286349 NM_016784 ENSMUSG00000027998 Plrg1 AA958940|C80566|Tango4 pleiotropic regulator 1 protein-coding unique_peak2_28_94_0.77880770618162_6.95925946142176_4.37352394138124 chr6 43636989 43637695 + 4.37352394138124 NA intron (NM_001311111, intron 2 of 7) intron (NM_001311111, intron 2 of 7) 28936 NM_001311111 29807 Mm.320979 NM_013861 ENSMUSG00000029735 Tpk1 - thiamine pyrophosphokinase protein-coding unique_peak2_24_217_-0.682169132640542_7.42709975845665_4.37320124662843 chr12 21450769 21452318 + 4.37320124662843 NA Intergenic Intergenic -34107 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_24_217_-0.682169132640542_7.42709975845665_4.37320124662843 chr2 180726784 180727322 + 4.37320124662843 NA intron (NM_183161, intron 1 of 12) intron (NM_183161, intron 1 of 12) 1714 NM_183161 228993 Mm.87189 NM_183161 ENSMUSG00000023393 Slc17a9 1700019H03Rik|BC019537|Vnut solute carrier family 17, member 9 protein-coding common_peak2_88_810_-0.330539735453085_9.49828823649073_4.37289963480752 chr7 4611737 4614923 + 4.37289963480752 NA Intergenic Intergenic -9289 NM_207270 545902 Mm.188925 NM_207270 ENSMUSG00000035429 Ptprh R-PTP-H|sap-1 protein tyrosine phosphatase, receptor type, H protein-coding common_peak2_343_3039_0.15570849548207_11.647709856072_4.37250203337279 chr7 126699733 126705842 + 4.37250203337279 NA intron (NM_001301374, intron 2 of 10) intron (NM_001301374, intron 2 of 10) 1433 NM_001301374 12721 Mm.290482 NM_009898 ENSMUSG00000030707 Coro1a Clabp|Lmb3|TACO|p57 coronin, actin binding protein 1A protein-coding common_peak1_19_50_1.01870888565928_6.18177978480114_4.37156477859418-4 chr14 121880405 121880910 + 4.37156477859418 NA intron (NM_026861, intron 1 of 8) intron (NM_026861, intron 1 of 8) -1249 NR_130999 78312 Mm.188743 NR_130999 ENSMUSG00000102112 1810041H14Rik - RIKEN cDNA 1810041H14 gene ncRNA unique_peak1_19_50_1.01870888565928_6.18177978480114_4.37156477859418 chr9 32726821 32727274 + 4.37156477859418 NA intron (NM_011808, intron 1 of 7) Lx8|LINE|L1 31005 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_19_50_1.01870888565928_6.18177978480114_4.37156477859418-3 chr14 69733548 69733991 + 4.37156477859418 NA intron (NR_130157, intron 1 of 2) B3|SINE|B2 935 NR_130157 75016 Mm.394574 NR_130157 ENSMUSG00000097284 4930480K23Rik - RIKEN cDNA 4930480K23 gene ncRNA common_peak1_19_50_1.01870888565928_6.18177978480114_4.37156477859418-2 chr10 75278177 75278582 + 4.37156477859418 NA intron (NM_153406, intron 12 of 15) ORR1A4|LTR|ERVL-MaLR -38498 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_19_50_1.01870888565928_6.18177978480114_4.37156477859418 chr10 58254697 58255189 + 4.37156477859418 NA promoter-TSS (NM_027375) promoter-TSS (NM_027375) -583 NM_027375 70297 Mm.25531 NM_027375 ENSMUSG00000038039 Gcc2 0610043A03Rik|2210420P05Rik|2600014C01Rik|AW112121|mKIAA0336 GRIP and coiled-coil domain containing 2 protein-coding common_peak1_439_4175_0.133221955375099_12.0945169742574_4.37073761604593 chr11 68852159 68855353 + 4.37073761604593 NA promoter-TSS (NM_023668) promoter-TSS (NM_023668) -625 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding common_peak1_30_268_-0.604780157822317_7.76907228364546_4.37056612537627-2 chr7 126486637 126487175 + 4.37056612537627 NA promoter-TSS (NM_001163713) promoter-TSS (NM_001163713) -449 NM_172745 233870 Mm.197829 NM_172745 ENSMUSG00000073838 Tufm 2300002G02Rik|C76308|C76389|EF-TuMT|EFTU Tu translation elongation factor, mitochondrial protein-coding common_peak1_30_268_-0.604780157822317_7.76907228364546_4.37056612537627 chr6 145101100 145101659 + 4.37056612537627 NA Intergenic Intergenic -14257 NM_001281980 16970 Mm.843 NM_008511 ENSMUSG00000030263 Lrmp D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1 lymphoid-restricted membrane protein protein-coding common_peak1_138_919_0.276494729848226_9.98373741586849_4.36877796645034 chr11 60934792 60936469 + 4.36877796645034 NA intron (NM_008928, intron 1 of 11) intron (NM_008928, intron 1 of 11) 3573 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding unique_peak2_17_159_-0.817242733014695_6.91330672838001_4.36843621182123 chr4 142001804 142003080 + 4.36843621182123 NA exon (NM_177868, exon 2 of 32) exon (NM_177868, exon 2 of 32) 9209 NM_177868 329977 Mm.252019 NM_028429 ENSMUSG00000051435 Fhad1 2900090M10Rik|B230311F11 forkhead-associated (FHA) phosphopeptide binding domain 1 protein-coding common_peak1_17_159_-0.817242733014695_6.91330672838001_4.36843621182123 chr2 158735830 158736465 + 4.36843621182123 NA intron (NM_153089, intron 2 of 10) RMER19B|LTR|ERVK -31952 NM_027975 71878 Mm.85162 NM_027975 ENSMUSG00000027654 Fam83d 2310007D09Rik|BB104611 family with sequence similarity 83, member D protein-coding unique_peak2_27_242_-0.638247753587856_7.60568862681185_4.36826149516121 chr11 98741446 98742635 + 4.36826149516121 NA intron (NM_001313983, intron 1 of 9) CpG 255 NM_001313983 21833 Mm.265917 NM_178060 ENSMUSG00000058756 Thra 6430529J03Rik|AW259572|Erba|Nr1a1|Rvr|T3R[a]|T3Ralpha|Thra1|Thra2|c-erbA-1|c-erbA-alpha|c-erbAalpha thyroid hormone receptor alpha protein-coding common_peak1_27_242_-0.638247753587856_7.60568862681185_4.36826149516121 chr5 134269990 134270544 + 4.36826149516121 NA intron (NM_001080749, intron 10 of 32) intron (NM_001080749, intron 10 of 32) -40642 NR_104383 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak1_39_156_0.623125789925505_7.60618364385438_4.36826149516121 chr1 180357737 180358536 + 4.36826149516121 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -27587 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_61_548_-0.407367823084536_8.89697842746293_4.36735379752468 chr11 4134943 4135744 + 4.36735379752468 NA exon (NM_027859, exon 1 of 9) exon (NM_027859, exon 1 of 9) 183 NM_027859 71673 Mm.240586 NM_027859 ENSMUSG00000003581 Rnf215 0610009J22Rik|AW557025|C77903 ring finger protein 215 protein-coding common_peak2_44_186_0.579284177676995_7.83653654872613_4.36733522345292 chr2 18027485 18028427 + 4.36733522345292 NA non-coding (NR_028376, exon 2 of 2) non-coding (NR_028376, exon 2 of 2) 707 NR_028378 100034739 Mm.401643 NR_028378 Gm17762 - predicted gene, 17762 ncRNA common_peak1_284_2381_0.174646608564382_11.3052810021463_4.36654182951182 chr11 102295283 102298035 + 4.36654182951182 NA promoter-TSS (NM_001098837) promoter-TSS (NM_001098837) -30 NM_001098837 217218 Mm.390381 NM_001098836 ENSMUSG00000059995 Atxn7l3 E030022H21Rik ataxin 7-like 3 protein-coding common_peak1_25_79_0.833493149753569_6.73867466976415_4.36492227447476 chr12 103388600 103389067 + 4.36492227447476 NA 5' UTR (NM_026580, exon 1 of 6) 5' UTR (NM_026580, exon 1 of 6) 151 NM_001177841 68149 Mm.127378 NM_026580 ENSMUSG00000021203 Otub2 2010015L18Rik|4930586I02Rik|AI413508|AW557219|OTB2|OTU2 OTU domain, ubiquitin aldehyde binding 2 protein-coding common_peak1_25_79_0.833493149753569_6.73867466976415_4.36492227447476-3 chr17 65772011 65772669 + 4.36492227447476 NA intron (NM_133685, intron 1 of 6) CpG 412 NM_133685 106572 Mm.29274 NM_133685 ENSMUSG00000056515 Rab31 1700093E07Rik|AI415285|Rab22B RAB31, member RAS oncogene family protein-coding unique_peak2_15_143_-0.873671738317144_6.73308913228374_4.36492227447476 chr15 75615905 75616656 + 4.36492227447476 NA promoter-TSS (NM_011759) promoter-TSS (NM_011759) -404 NM_001044718 22701 Mm.87210 NM_011759 ENSMUSG00000047003 Zfp41 CTfin92|Zfp-41 zinc finger protein 41 protein-coding common_peak1_25_79_0.833493149753569_6.73867466976415_4.36492227447476-2 chr15 76246065 76246664 + 4.36492227447476 NA promoter-TSS (NM_023168) promoter-TSS (NM_023168) -443 NM_023168 66168 Mm.41665 NM_023168 ENSMUSG00000022564 Grina 1110025J15Rik|Lag|Tmbim3 glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) protein-coding unique_peak1_13_26_1.3050649366681_5.40741997049752_4.36422420509488-3 chr8 126797870 126798232 + 4.36422420509488 NA Intergenic Intergenic 147870 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding unique_peak1_13_26_1.3050649366681_5.40741997049752_4.36422420509488-2 chr11 86595515 86595871 + 4.36422420509488 NA intron (NM_029478, intron 10 of 11) B1_Mus2|SINE|Alu -11535 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_13_26_1.3050649366681_5.40741997049752_4.36422420509488 chr2 11500958 11501335 + 4.36422420509488 NA intron (NM_001177758, intron 1 of 14) intron (NM_001177758, intron 1 of 14) 944 NM_001177754 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding unique_peak1_13_26_1.3050649366681_5.40741997049752_4.36422420509488 chr11 55154311 55154729 + 4.36422420509488 NA Intergenic (GGGAGA)n|Simple_repeat|Simple_repeat -2814 NM_172258 215332 Mm.87054 NM_172258 ENSMUSG00000049491 Slc36a3 PAT3|TRAMD2|tramdorin2 solute carrier family 36 (proton/amino acid symporter), member 3 protein-coding unique_peak1_13_26_1.3050649366681_5.40741997049752_4.36422420509488-4 chr9 54917391 54917719 + 4.36422420509488 NA 5' UTR (NM_177351, exon 1 of 5) 5' UTR (NM_177351, exon 1 of 5) 265 NM_177351 235386 Mm.259334 NM_177351 ENSMUSG00000035878 Hykk Agphd1|C630028N24Rik hydroxylysine kinase 1 protein-coding common_peak1_13_26_1.3050649366681_5.40741997049752_4.36422420509488-2 chr9 63611417 63611766 + 4.36422420509488 NA intron (NM_025857, intron 1 of 9) intron (NM_025857, intron 1 of 9) 8936 NM_025857 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak1_16_151_-0.844391252469413_6.82573188720888_4.36300399840177 chr16 10979163 10979540 + 4.36300399840177 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 13770 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding unique_peak2_16_151_-0.844391252469413_6.82573188720888_4.36300399840177 chr17 83973560 83974307 + 4.36300399840177 NA Intergenic Intergenic -24619 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak1_91_840_-0.324276563788921_9.55382370836068_4.36282698199148-2 chr5 76946782 76948211 + 4.36282698199148 NA intron (NM_172146, intron 1 of 10) intron (NM_172146, intron 1 of 10) -3915 NM_025939 67054 Mm.182931 NM_025939 ENSMUSG00000029247 Paics 2610511I09Rik|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase protein-coding common_peak1_91_840_-0.324276563788921_9.55382370836068_4.36282698199148 chr16 44724127 44725115 + 4.36282698199148 NA intron (NM_145972, intron 1 of 8) CpG 320 NM_145972 212547 Mm.310573 NM_145972 ENSMUSG00000036208 Nepro - nucleolus and neural progenitor protein protein-coding common_peak2_189_1397_0.225933456086132_10.5621153734185_4.36196369655775 chr4 11006334 11008454 + 4.36196369655775 NA 5' UTR (NM_175175, exon 1 of 2) 5' UTR (NM_175175, exon 1 of 2) 225 NM_175175 71801 Mm.34351 NM_175175 ENSMUSG00000049969 Plekhf2 1110070J07Rik|AA673237|ZFYVE18 pleckstrin homology domain containing, family F (with FYVE domain) member 2 protein-coding common_peak2_203_1535_0.215932898779013_10.6929289501107_4.36129034507753 chr1 34432755 34436133 + 4.36129034507753 NA Intergenic Intergenic -1245 NR_039562 100628580 NR_039562 ENSMUSG00000092852 Mir5103 mir-5103|mmu-mir-5103|mu-mir-5103 microRNA 5103 ncRNA common_peak1_118_1116_-0.27834110024367_9.98624292036148_4.36076567649866 chr17 35051053 35052119 + 4.36076567649866 NA intron (NM_033444, intron 1 of 5) intron (NM_033444, intron 1 of 5) 1343 NM_033444 114584 Mm.29524 NM_033444 ENSMUSG00000007041 Clic1 Clcp|G6 chloride intracellular channel 1 protein-coding common_peak1_92_850_-0.322198600798373_9.57191602128678_4.36020646793663 chr4 129618546 129619856 + 4.36020646793663 NA promoter-TSS (NM_198026) promoter-TSS (NM_198026) -108 NM_198026 230767 Mm.441132 NM_198026 ENSMUSG00000040795 Iqcc BC026978 IQ motif containing C protein-coding common_peak1_92_850_-0.322198600798373_9.57191602128678_4.36020646793663-2 chrX 167226646 167227861 + 4.36020646793663 NA Intergenic Intergenic -18035 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding unique_peak2_23_208_-0.693583663988788_7.36056730008649_4.36010824164203 chr15 62177123 62178019 + 4.36010824164203 NA intron (NR_132746, intron 3 of 6) intron (NR_132746, intron 3 of 6) 41880 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_23_208_-0.693583663988788_7.36056730008649_4.36010824164203 chr8 15028009 15028487 + 4.36010824164203 NA exon (NM_029116, exon 2 of 2) exon (NM_029116, exon 2 of 2) 17223 NM_029116 74901 Mm.46675 NM_029116 ENSMUSG00000055675 Kbtbd11 2900016B01Rik|4930465M17Rik|mKIAA0711 kelch repeat and BTB (POZ) domain containing 11 protein-coding common_peak2_53_244_0.51218193902338_8.19272890851426_4.3595758948009 chr9 62971849 62973072 + 4.3595758948009 NA intron (NM_019663, intron 1 of 13) intron (NM_019663, intron 1 of 13) 8419 NM_019663 56469 Mm.431253 NM_019663 ENSMUSG00000032405 Pias1 2900068C24Rik|Ddxbp1|GBP protein inhibitor of activated STAT 1 protein-coding common_peak1_53_244_0.51218193902338_8.19272890851426_4.3595758948009 chr6 116628427 116629249 + 4.3595758948009 NA promoter-TSS (NM_001302440) promoter-TSS (NM_001302440) 90 NM_001302439 67255 Mm.18810 NM_026057 ENSMUSG00000059878 Zfp422 2900028O21Rik|AU041373|KOX15|Krox-25-2|Krox-26|Krox25|Krox26|Znf22 zinc finger protein 422 protein-coding unique_peak2_11_110_-1.00725270944437_6.29078951162792_4.35927177451459 chr7 90305930 90306608 + 4.35927177451459 NA intron (NM_001289583, intron 1 of 19) intron (NM_001289583, intron 1 of 19) 3914 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak1_20_55_0.970119721740894_6.29241478292805_4.35927177451457 chr1 161076021 161076472 + 4.35927177451457 NA intron (NR_131030, intron 2 of 4) intron (NR_131030, intron 2 of 4) 5479 NR_131028 70454 Mm.248212 NM_027429 ENSMUSG00000026708 Cenpl 2610300B10Rik|AW121806|AW550697|CENP-L centromere protein L protein-coding common_peak1_20_55_0.970119721740894_6.29241478292805_4.35927177451457-2 chr9 107986152 107986699 + 4.35927177451457 NA promoter-TSS (NM_026597) promoter-TSS (NM_026597) -509 NM_026597 68176 Mm.76166 NM_026597 ENSMUSG00000042106 Fam212a 6230427J02Rik|Inka1 family with sequence similarity 212, member A protein-coding common_peak1_20_55_0.970119721740894_6.29241478292805_4.35927177451457 chr11 52319759 52320098 + 4.35927177451457 NA Intergenic Intergenic -36914 NM_001313981 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak2_77_415_0.399116042653125_8.89999773946765_4.35886237203182 chr15 76709881 76711385 + 4.35886237203182 NA promoter-TSS (NM_058214) promoter-TSS (NM_058214) -74 NM_058214 79456 Mm.18373 NM_058214 ENSMUSG00000033762 Recql4 RecQ4 RecQ protein-like 4 protein-coding unique_peak2_32_285_-0.582551389117509_7.86859564221963_4.35855668350573 chr2 30995160 30996916 + 4.35855668350573 NA intron (NM_028846, intron 1 of 24) intron (NM_028846, intron 1 of 24) 13759 NM_028846 74270 Mm.346654 NM_028846 ENSMUSG00000026854 Usp20 1700055M05Rik|AI467231|Vdu2 ubiquitin specific peptidase 20 protein-coding common_peak1_32_285_-0.582551389117509_7.86859564221963_4.35855668350573 chr7 142375704 142376451 + 4.35855668350573 NA 3' UTR (NM_009983, exon 9 of 9) 3' UTR (NM_009983, exon 9 of 9) -3818 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_88_499_0.367234084102101_9.14940132671314_4.35816126226374-2 chr8 71881531 71882794 + 4.35816126226374 NA promoter-TSS (NM_145624) promoter-TSS (NM_145624) 94 NM_145624 236193 Mm.290790 NM_145624 ENSMUSG00000056019 Zfp709 BC021921|GIOT-4|HIT-40 zinc finger protein 709 protein-coding common_peak1_88_499_0.367234084102101_9.14940132671314_4.35816126226374 chr11 57517967 57519177 + 4.35816126226374 NA promoter-TSS (NM_026342) promoter-TSS (NM_026342) 72 NM_001168667 67726 Mm.25632 NM_026342 ENSMUSG00000020523 Fam114a2 1810073G14Rik|9030624B09Rik family with sequence similarity 114, member A2 protein-coding common_peak2_88_499_0.367234084102101_9.14940132671314_4.35816126226374 chr11 106707310 106709232 + 4.35816126226374 NA intron (NM_001305158, intron 2 of 14) PB1D10|SINE|Alu 7010 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak1_38_337_-0.527935986674323_8.13691144294502_4.35772693903258 chr5 124337382 124338203 + 4.35772693903258 NA intron (NM_028310, intron 1 of 1) intron (NM_028310, intron 1 of 1) 9703 NM_001134717 72650 Mm.121658 NM_028310 ENSMUSG00000047635 2810006K23Rik - RIKEN cDNA 2810006K23 gene protein-coding common_peak2_116_1095_-0.280954117199382_9.95755502436084_4.35769315054283 chr11 104359655 104361935 + 4.35769315054283 NA intron (NM_001081045, intron 4 of 13) ID_B1|SINE|B4 81496 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak1_245_2544_-0.181259848557991_11.2228200166841_4.35737006814616 chr10 19060638 19062253 + 4.35737006814616 NA Intergenic Intergenic -46035 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_65_327_0.446380254229153_8.58074213173266_4.35732103091582 chr13 101662872 101663755 + 4.35732103091582 NA Intergenic Intergenic 29317 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_62_557_-0.402512151877405_8.92286523589048_4.35633849302293 chr13 91701527 91703245 + 4.35633849302293 NA non-coding (NR_015501, exon 2 of 2) non-coding (NR_015501, exon 2 of 2) -39135 NM_028790 74156 Mm.275963 NM_028790 ENSMUSG00000021620 Acot12 1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1 acyl-CoA thioesterase 12 protein-coding common_peak1_94_870_-0.318059118323653_9.60749934943704_4.35599032897595 chr5 138619076 138619818 + 4.35599032897595 NA intron (NM_001044747, intron 1 of 4) CpG 296 NM_013844 24135 Mm.27575 NM_013844 ENSMUSG00000058291 Zfp68 KRAB3|KRAZ2|Zfp70|mszf22|mszf49 zinc finger protein 68 protein-coding common_peak1_112_1053_-0.286139653464813_9.89858932490481_4.35388965635077 chr15 12824003 12825367 + 4.35388965635077 NA promoter-TSS (NM_001130149) promoter-TSS (NM_001130149) -28 NM_001166360 77877 Mm.207311 NM_029998 ENSMUSG00000022195 6030458C11Rik - RIKEN cDNA 6030458C11 gene protein-coding common_peak2_89_507_0.364106261978822_9.17073781776158_4.35353063113462 chr11 11563675 11565431 + 4.35353063113462 NA Intergenic Intergenic 63285 NM_001305143 102631730 Mm.159430 NM_001305143 ENSMUSG00000062511 4930512M02Rik - RIKEN cDNA 4930512M02 gene protein-coding common_peak2_326_3536_-0.152433752017997_11.7120936276919_4.35352044748059 chr6 129208276 129213147 + 4.35352044748059 NA Intergenic Intergenic 27334 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak1_130_1242_-0.262523319205611_10.1483489214497_4.35171518139738 chr11 97108688 97110446 + 4.35171518139738 NA intron (NM_019507, intron 1 of 5) intron (NM_019507, intron 1 of 5) 5764 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding common_peak2_175_1733_-0.220253506968815_10.6497614297374_4.35159220861062 chrX 74269466 74272288 + 4.35159220861062 NA promoter-TSS (NM_052835) promoter-TSS (NM_052835) 61 NM_052835 110954 Mm.100113 NM_052835 ENSMUSG00000008682 Rpl10 D0HXS648|DXHXS648|DXHXS648E|QM|QM16 ribosomal protein L10 protein-coding common_peak1_279_2327_0.176407305174321_11.2730789954954_4.35114550251109 chr2 165883587 165885887 + 4.35114550251109 NA 5' UTR (NM_001252587, exon 1 of 12) 5' UTR (NM_001252587, exon 1 of 12) 101 NM_001252584 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_106_991_-0.295225891031102_9.80658336487132_4.35030043729235 chr12 21171900 21174681 + 4.35030043729235 NA intron (NM_001135192, intron 2 of 28) URR1B|DNA|hAT-Charlie 61534 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_57_271_0.487812784448586_8.33136923347463_4.35024831074268 chr11 98682619 98683236 + 4.35024831074268 NA exon (NM_009439, exon 1 of 12) exon (NM_009439, exon 1 of 12) 373 NM_009439 22123 Mm.12194 NM_009439 ENSMUSG00000017221 Psmd3 AI255837|AntP91a|D11Bwg1349e|Psd3|Tstap91a proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 protein-coding common_peak2_182_1329_0.231443436811704_10.4929322487944_4.34958325147009 chr8 122555774 122557937 + 4.34958325147009 NA Intergenic Intergenic -5526 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak2_245_1965_0.191142486064486_11.0366188493728_4.34780356767203 chr11 101170329 101174719 + 4.34780356767203 NA TTS (NM_007721) TTS (NM_007721) -1222 NM_146030 217198 Mm.273254 NM_146030 ENSMUSG00000035172 Plekhh3 BC020025 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 protein-coding common_peak2_192_1427_0.22302502841716_10.5912927782377_4.34765395770525 chr2 35660832 35662688 + 4.34765395770525 NA intron (NM_001290641, intron 3 of 15) CpG-8041 -30234 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak2_66_334_0.442526414804588_8.60928049274743_4.34644643636147 chr2 118641982 118643694 + 4.34644643636147 NA Intergenic Intergenic -20739 NM_001033254 214230 Mm.241857 NM_001033254 ENSMUSG00000074923 Pak6 4732456M09 p21 protein (Cdc42/Rac)-activated kinase 6 protein-coding common_peak1_51_455_-0.450856458337453_8.60746178499602_4.34644643636138-2 chr17 57276056 57277211 + 4.34644643636138 NA Intergenic MIR|SINE|MIR -2467 NM_001163816 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding common_peak1_51_455_-0.450856458337453_8.60746178499602_4.34644643636138 chr14 70285941 70286961 + 4.34644643636138 NA intron (NM_001304992, intron 1 of 12) intron (NM_001304992, intron 1 of 12) 3046 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak1_102_951_-0.303269879531204_9.74318282354234_4.34640694841911 chr2 155133242 155134373 + 4.34640694841911 NA intron (NM_001243712, intron 1 of 25) CpG 326 NM_008395 16396 Mm.208286 NM_008395 ENSMUSG00000027598 Itch 6720481N21Rik|8030492O04Rik|A130065M08|AIP4|C230047C07Rik itchy, E3 ubiquitin protein ligase protein-coding common_peak1_36_320_-0.546645835910892_8.05310656916686_4.34558019306608 chr13 38502839 38503582 + 4.34558019306608 NA intron (NM_145367, intron 9 of 9) intron (NM_145367, intron 9 of 9) 24704 NM_001289599 105245 Mm.28622 NM_145367 ENSMUSG00000038991 Txndc5 AL022641|ERp46|PC-TRP thioredoxin domain containing 5 protein-coding common_peak2_42_174_0.594516058421622_7.74846914104314_4.34551359049976 chr6 108442596 108443641 + 4.34551359049976 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -46625 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_26_233_-0.64815715274381_7.5462861432115_4.34496729952319-2 chr7 63925600 63926257 + 4.34496729952319 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) 9071 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak1_26_233_-0.64815715274381_7.5462861432115_4.34496729952319-3 chr7 126928459 126928883 + 4.34496729952319 NA promoter-TSS (NM_172747) promoter-TSS (NM_172747) -208 NM_172747 233877 Mm.245897 NM_172747 ENSMUSG00000030685 Kctd13 1500003N18Rik|AV259508|PDIP1alpha|Pdip1|Poldip1 potassium channel tetramerisation domain containing 13 protein-coding unique_peak2_26_233_-0.64815715274381_7.5462861432115_4.34496729952319-2 chr5 136083884 136085107 + 4.34496729952319 NA intron (NM_001039103, intron 1 of 19) intron (NM_001039103, intron 1 of 19) 579 NM_001039103 54153 Mm.290655 NM_133914 ENSMUSG00000004952 Rasa4 AA793972|AW112107|BB079060|CAPRI|GAPL RAS p21 protein activator 4 protein-coding common_peak1_26_233_-0.64815715274381_7.5462861432115_4.34496729952319 chr12 33169903 33170526 + 4.34496729952319 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 22528 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak2_26_233_-0.64815715274381_7.5462861432115_4.34496729952319 chr17 36033902 36035507 + 4.34496729952319 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) -2003 NM_010398 15040 Mm.439648 NM_010398 ENSMUSG00000067212 H2-T23 37b|37c|H-2T23|H2-Qa1|Qa-1|Qa-1(b)|Qa1|Qed-1|T18c|T18c(37)|T23b|T23d histocompatibility 2, T region locus 23 protein-coding common_peak1_68_614_-0.381847279979807_9.0735189602367_4.34441829814258 chr8 77423112 77424216 + 4.34441829814258 NA intron (NM_030113, intron 5 of 22) RLTR11A2|LTR|ERVK -93392 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_147_1424_-0.243737930355342_10.3548772387618_4.34299185016031 chr2 126875122 126876598 + 4.34299185016031 NA intron (NM_001164325, intron 1 of 38) CpG 401 NM_001164325 58800 Mm.244705 NM_021450 ENSMUSG00000027365 Trpm7 2310022G15Rik|4833414K03Rik|5033407O22Rik|CHAK|CHAK1|LTrpC-7|Ltpr7|Ltrpc7|TRPPLIK transient receptor potential cation channel, subfamily M, member 7 protein-coding common_peak1_147_1424_-0.243737930355342_10.3548772387618_4.34299185016031-2 chr9 56263495 56265262 + 4.34299185016031 NA intron (NM_172924, intron 3 of 6) intron (NM_172924, intron 3 of 6) -103308 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_92_531_0.355534285386401_9.23304957819439_4.3425834129919 chr10 19934154 19935376 + 4.3425834129919 NA exon (NM_008580, exon 1 of 30) exon (NM_008580, exon 1 of 30) 239 NM_008580 26408 Mm.6595 NM_008580 ENSMUSG00000071369 Map3k5 7420452D20Rik|ASK|ASK1|MAPKKK5|Mekk5 mitogen-activated protein kinase kinase kinase 5 protein-coding common_peak2_142_956_0.269815232096402_10.0372827305342_4.34158856243266 chr17 50728896 50732592 + 4.34158856243266 NA Intergenic Intergenic 32063 NM_001297747 12228 Mm.392910 NM_009770 ENSMUSG00000022863 Btg3 ANA|tob5 B cell translocation gene 3 protein-coding common_peak1_181_1320_0.231542602659575_10.4831860525766_4.34133949010772 chr15 74954749 74956994 + 4.34133949010772 NA intron (NM_001164039, intron 2 of 4) intron (NM_001164039, intron 2 of 4) 765 NM_001164040 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak2_132_867_0.282349080217882_9.90272577255342_4.34120319564738 chr7 19318708 19321563 + 4.34120319564738 NA Intergenic CpG -10090 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding common_peak1_29_259_-0.613711380430751_7.71551212281308_4.33967531961606 chr11 3266569 3266968 + 4.33967531961606 NA promoter-TSS (NM_007879) promoter-TSS (NM_007879) -382 NM_007879 13494 Mm.3250 NM_007879 ENSMUSG00000020457 Drg1 AA408859|AI132520|Nedd3 developmentally regulated GTP binding protein 1 protein-coding common_peak1_29_259_-0.613711380430751_7.71551212281308_4.33967531961606-2 chr18 80710350 80711008 + 4.33967531961606 NA intron (NM_198429, intron 1 of 9) intron (NM_198429, intron 1 of 9) 2392 NM_198429 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_29_259_-0.613711380430751_7.71551212281308_4.33967531961606-3 chr5 123523632 123524218 + 4.33967531961606 NA intron (NM_023232, intron 1 of 5) CpG 239 NM_023232 66593 Mm.46716 NM_023232 ENSMUSG00000029433 Diablo 0610041G12Rik|1700006L01Rik|AU040403|Smac diablo, IAP-binding mitochondrial protein protein-coding common_peak1_18_46_1.04577535171925_6.07747652753726_4.33898449928765 chr1 161780479 161780878 + 4.33898449928765 NA TTS (NM_001205243) TTS (NM_001205243) 7817 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_18_46_1.04577535171925_6.07747652753726_4.33898449928765-2 chr15 67288772 67289230 + 4.33898449928765 NA intron (NR_045140, intron 5 of 8) intron (NR_045140, intron 5 of 8) 62232 NR_045140 69334 Mm.63770 NR_045140 ENSMUSG00000102069 1700012I11Rik - RIKEN cDNA 1700012I11 gene ncRNA unique_peak1_18_46_1.04577535171925_6.07747652753726_4.33898449928765 chr7 75586205 75586678 + 4.33898449928765 NA intron (NM_029332, intron 5 of 36) intron (NM_029332, intron 5 of 36) 130907 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_213_1636_0.208744124067977_10.7812106685081_4.33829652908171 chr7 19821965 19824395 + 4.33829652908171 NA promoter-TSS (NM_033601) promoter-TSS (NM_033601) -425 NM_033601 12051 Mm.439658 NM_033601 ENSMUSG00000053175 Bcl3 AI528691|Bcl-3 B cell leukemia/lymphoma 3 protein-coding common_peak2_69_623_-0.377344193152359_9.09673012228607_4.33817200044925 chr13 55189590 55190988 + 4.33817200044925 NA Intergenic CpG -19493 NM_008739 18193 Mm.12964 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak2_115_720_0.308032487644459_9.64787169306305_4.33792862125575 chr11 31869990 31871679 + 4.33792862125575 NA promoter-TSS (NM_026252) promoter-TSS (NM_026252) -106 NM_001290676 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding common_peak1_43_382_-0.49479052804465_8.33380531790263_4.33774628541164 chr8 86851920 86852759 + 4.33774628541164 NA intron (NM_030563, intron 3 of 6) intron (NM_030563, intron 3 of 6) 32919 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_94_547_0.350437707314684_9.27325093661787_4.3375372089562 chr5 109865828 109867323 + 4.3375372089562 NA Intergenic Intergenic -32433 NR_027964 667213 Mm.454429 NR_027964 ENSMUSG00000105044 Gm10416 EG667213|ENSMUSG00000072761 zinc finger protein pseudogene pseudo common_peak1_30_105_0.738761750171108_7.09730132964875_4.33738477523011-6 chr7 99983877 99984492 + 4.33738477523011 NA Intergenic MLTR14|LTR|ERV1 -3726 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding common_peak1_30_105_0.738761750171108_7.09730132964875_4.33738477523011-4 chr2 35417219 35417881 + 4.33738477523011 NA intron (NM_001308299, intron 4 of 7) intron (NM_001308299, intron 4 of 7) -20376 NM_001272040 74854 Mm.159338 NM_001080709 ENSMUSG00000079421 4930402F06Rik - RIKEN cDNA 4930402F06 gene protein-coding common_peak1_30_105_0.738761750171108_7.09730132964875_4.33738477523011-2 chr16 36828324 36828800 + 4.33738477523011 NA promoter-TSS (NM_001113401) promoter-TSS (NM_001113401) 162 NM_177128 320299 Mm.222934 NM_177128 ENSMUSG00000022837 Iqcb1 6820449I09Rik|AV128382|NPHP5 IQ calmodulin-binding motif containing 1 protein-coding common_peak1_30_105_0.738761750171108_7.09730132964875_4.33738477523011-5 chr5 122899619 122900254 + 4.33738477523011 NA intron (NM_001003953, intron 12 of 22) CpG 414 NM_013910 30841 Mm.86406 NM_013910 ENSMUSG00000029475 Kdm2b Cxxc2|Fbl10|Fbxl10|Jhdm1b|PCCX2 lysine (K)-specific demethylase 2B protein-coding common_peak1_30_105_0.738761750171108_7.09730132964875_4.33738477523011 chr1 21829629 21830216 + 4.33738477523011 NA intron (NM_001310477, intron 1 of 12) intron (NM_001310477, intron 1 of 12) 132020 NM_001160139 226922 Mm.336519 NM_023872 ENSMUSG00000028033 Kcnq5 7730402H11|9230107O05Rik|AA589396|D1Mgi1 potassium voltage-gated channel, subfamily Q, member 5 protein-coding common_peak1_30_105_0.738761750171108_7.09730132964875_4.33738477523011-3 chr17 84161211 84161985 + 4.33738477523011 NA Intergenic Intergenic 26349 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_24_74_0.857196501640503_6.65741694131613_4.33571598941887-3 chr6 129757807 129758423 + 4.33571598941887 NA Intergenic L1_Mur2|LINE|L1 -17631 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak1_24_74_0.857196501640503_6.65741694131613_4.33571598941887-2 chr4 133174019 133174577 + 4.33571598941887 NA intron (NM_153423, intron 1 of 8) intron (NM_153423, intron 1 of 8) -21357 NR_105984 102466215 NR_105984 ENSMUSG00000099202 Mir7017 Gm27945|mmu-mir-7017 microRNA 7017 ncRNA common_peak1_24_74_0.857196501640503_6.65741694131613_4.33571598941887 chr15 58931287 58931803 + 4.33571598941887 NA intron (NM_175151, intron 1 of 11) B3A|SINE|B2 2185 NM_175151 69694 Mm.383230 NM_175151 ENSMUSG00000050891 Tatdn1 2310079P03Rik|CDA11 TatD DNase domain containing 1 protein-coding common_peak2_24_74_0.857196501640503_6.65741694131613_4.33571598941887 chr8 4166575 4167072 + 4.33571598941887 NA intron (NM_001039578, intron 1 of 10) CpG 256 NM_001039578 213027 Mm.437106 NM_153536 ENSMUSG00000011832 Evi5l 1700084G18Rik|2310039H16Rik|3110007G05Rik|B130050I23Rik ecotropic viral integration site 5 like protein-coding common_peak1_24_74_0.857196501640503_6.65741694131613_4.33571598941887-4 chr7 81572716 81573312 + 4.33571598941887 NA intron (NM_001004185, intron 1 of 9) MTD|LTR|ERVL-MaLR 1722 NM_001004185 434204 Mm.181641 NM_001004185 ENSMUSG00000045795 Whamm BB081391|Whdc1|mKIAA1971 WAS protein homolog associated with actin, golgi membranes and microtubules protein-coding common_peak1_236_1871_0.195868887683197_10.968299163425_4.33496780450053 chr5 113992283 113994410 + 4.33496780450053 NA intron (NM_198109, intron 1 of 14) CpG 411 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot homolog 1 (Drosophila) protein-coding common_peak1_86_789_-0.332911012398613_9.45925333686516_4.33444074004314 chr3 123507499 123508503 + 4.33444074004314 NA promoter-TSS (NR_028573) promoter-TSS (NR_028573) 65 NR_028573 100306957 Mm.260791 NR_028573 ENSMUSG00000092730 Snora24 ACA24 small nucleolar RNA, H/ACA box 24 snoRNA common_peak1_59_529_-0.414579805666502_8.84255864661731_4.33443561616671 chr16 3871695 3872811 + 4.33443561616671 NA 5' UTR (NM_001033159, exon 1 of 3) 5' UTR (NM_001033159, exon 1 of 3) 121 NM_001033159 71063 Mm.379190 NM_001033159 ENSMUSG00000039789 Zfp597 4933407K12Rik|AI462383|AI666357 zinc finger protein 597 protein-coding common_peak2_109_669_0.319886044227136_9.5479603074587_4.33326180120427 chr11 23894297 23895435 + 4.33326180120427 NA intron (NM_172555, intron 1 of 21) CpG 404 NM_172555 216578 Mm.470599 NM_172555 ENSMUSG00000020273 Papolg 9630006B20Rik poly(A) polymerase gamma protein-coding common_peak2_109_669_0.319886044227136_9.5479603074587_4.33326180120427-2 chr2 167621469 167624384 + 4.33326180120427 NA intron (NM_001311146, intron 1 of 2) ID_B1|SINE|B4 9079 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak1_98_579_0.34154537379923_9.35068177691455_4.33221701918134 chr5 111330648 111331490 + 4.33221701918134 NA intron (NM_001301643, intron 1 of 10) intron (NM_001301643, intron 1 of 10) 372 NM_001301666 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak1_27_89_0.794711653688251_6.8892089231738_4.33083619872212-2 chr6 41557525 41558171 + 4.33083619872212 NA Intergenic Intergenic 36072 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding unique_peak2_27_89_0.794711653688251_6.8892089231738_4.33083619872212 chr15 101244120 101244963 + 4.33083619872212 NA Intergenic Intergenic -19355 NR_045328 380977 Mm.399924 NR_045326 ENSMUSG00000097915 A330009N23Rik - RIKEN cDNA A330009N23 gene ncRNA common_peak1_27_89_0.794711653688251_6.8892089231738_4.33083619872212 chr16 76762558 76763181 + 4.33083619872212 NA Intergenic Intergenic 248012 NR_040573 76601 Mm.396217 NR_040573 ENSMUSG00000100857 1700041M19Rik - RIKEN cDNA 1700041M19 gene ncRNA common_peak1_310_2668_0.165015800992098_11.464591490638_4.33066154427138 chr7 143007228 143010200 + 4.33066154427138 NA intron (NM_001128080, intron 3 of 8) intron (NM_001128080, intron 3 of 8) 3055 NM_001128081 27027 Mm.28172 NM_020286 ENSMUSG00000000244 Tspan32 AW208513|Art-1|BB235973|D7Wsu37e|Phemx|Tssc6 tetraspanin 32 protein-coding common_peak2_248_2578_-0.178955672467582_11.2431182215554_4.32815157918365 chr8 94362550 94366837 + 4.32815157918365 NA intron (NM_001205311, intron 24 of 24) intron (NM_001205311, intron 24 of 24) -21807 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak1_82_453_0.382957381877434_9.01802717822963_4.32778783911443 chr1 192069770 192071256 + 4.32778783911443 NA exon (NM_011633, exon 2 of 10) exon (NM_011633, exon 2 of 10) 22086 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak2_49_436_-0.458861966177858_8.54205848641167_4.32758541664932 chr13 29983363 29985554 + 4.32758541664932 NA promoter-TSS (NM_001289920) promoter-TSS (NM_001289920) -67 NM_001289920 13557 Mm.268356 NM_010093 ENSMUSG00000016477 E2f3 E2F3b|E2f3a E2F transcription factor 3 protein-coding common_peak1_49_436_-0.458861966177858_8.54205848641167_4.32758541664932 chr9 100460395 100461191 + 4.32758541664932 NA intron (NM_001033543, intron 6 of 6) intron (NM_001033543, intron 6 of 6) 25680 NM_001033543 213208 Mm.242896 NM_001033543 ENSMUSG00000044244 Il20rb AV228068|Fndc6|Gm186|Il20R2 interleukin 20 receptor beta protein-coding unique_peak2_49_436_-0.458861966177858_8.54205848641167_4.32758541664932 chr18 7648524 7650569 + 4.32758541664932 NA Intergenic ORR1E|LTR|ERVL-MaLR -22683 NM_001161620 75739 Mm.133293 NM_001081287 ENSMUSG00000057440 Mpp7 1110068J02Rik|2810038M04Rik|5430426E14Rik|AI415104|Gm955 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) protein-coding common_peak2_46_409_-0.476349012079428_8.44130559346573_4.3273225956208-2 chr18 82503249 82504977 + 4.3273225956208 NA intron (NM_010777, intron 2 of 6) intron (NM_010777, intron 2 of 6) 28990 NM_001025245 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_46_409_-0.476349012079428_8.44130559346573_4.3273225956208 chr13 67723509 67724693 + 4.3273225956208 NA intron (NM_145622, intron 1 of 3) intron (NM_145622, intron 1 of 3) 5072 NM_145622 235907 Mm.440123 NM_145622 ENSMUSG00000071281 Zfp65 KRAB5|Zfp71-rs1|pz114 zinc finger protein 65 protein-coding common_peak1_147_1001_0.264341480388916_10.1008375333897_4.32685692954652 chr8 84236323 84237967 + 4.32685692954652 NA promoter-TSS (NM_172503) promoter-TSS (NM_172503) -103 NM_172503 212168 Mm.117094 NM_172503 ENSMUSG00000035671 Zswim4 D330002I24|E130119J17Rik zinc finger SWIM-type containing 4 protein-coding unique_peak2_9_94_-1.10533369188653_6.01718876238768_4.32579147768669 chr18 67876028 67876777 + 4.32579147768669 NA intron (NM_027556, intron 41 of 45) intron (NM_027556, intron 41 of 45) -56855 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak2_9_94_-1.10533369188653_6.01718876238768_4.32579147768669-3 chrX 50569193 50570018 + 4.32579147768669 NA non-coding (NR_015505, exon 18 of 20) non-coding (NR_015505, exon 18 of 20) 32216 NR_131207 102639259 Mm.350898 NR_131207 Gm35612 - predicted gene, 35612 ncRNA unique_peak2_9_94_-1.10533369188653_6.01718876238768_4.32579147768669-2 chr18 89837217 89837744 + 4.32579147768669 NA Intergenic MMVL30-int|LTR|ERV1 -68344 NM_001039173 623279 Mm.447164 NM_001039173 ENSMUSG00000073514 Dok6 Dok-6 docking protein 6 protein-coding common_peak1_22_200_-0.712590887085418_7.29475624763622_4.3256317220258 chr7 45707956 45708586 + 4.3256317220258 NA exon (NM_016974, exon 3 of 4) exon (NM_016974, exon 3 of 4) 3024 NM_016974 13170 Mm.24222 NM_016974 ENSMUSG00000059824 Dbp - D site albumin promoter binding protein protein-coding common_peak1_120_1136_-0.2744496942568_10.0137916917638_4.32529092955731 chr7 137410201 137411142 + 4.32529092955731 NA promoter-TSS (NM_029886) promoter-TSS (NM_029886) 85 NM_029886 77252 Mm.29184 NM_029886 ENSMUSG00000040139 9430038I01Rik - RIKEN cDNA 9430038I01 gene protein-coding common_peak1_158_1544_-0.233514841195339_10.4766337021941_4.32465503865669 chr11 5541323 5542512 + 4.32465503865669 NA exon (NM_134033, exon 1 of 5) exon (NM_134033, exon 1 of 5) 300 NM_134033 104479 Mm.210403 NM_134033 ENSMUSG00000020482 Ccdc117 1110004K02Rik|1700026O03Rik|AU018638|AU042822|AV173073|BC018601 coiled-coil domain containing 117 protein-coding common_peak2_77_701_-0.355771459510343_9.27744149054939_4.32455601329809-2 chr4 152361133 152363304 + 4.32455601329809 NA intron (NM_029216, intron 9 of 40) intron (NM_029216, intron 9 of 40) 23567 NM_001081376 269610 Mm.40192 NM_029216 ENSMUSG00000005045 Chd5 4930532L22Rik|AW060752|B230399N07Rik|CHD-5 chromodomain helicase DNA binding protein 5 protein-coding common_peak2_77_701_-0.355771459510343_9.27744149054939_4.32455601329809 chr3 115814737 115816737 + 4.32455601329809 NA Intergenic Intergenic 72322 NR_027894 68161 Mm.392043 NR_015487 ENSMUSG00000054426 A930005H10Rik - RIKEN cDNA A930005H10 gene ncRNA unique_peak2_38_150_0.634538710282782_7.55567409446647_4.32355766582654 chr9 56099632 56100864 + 4.32355766582654 NA intron (NM_011193, intron 1 of 14) ORR1F|LTR|ERVL-MaLR 10272 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak2_271_2855_-0.169794758309504_11.3948828848743_4.32325376837917 chr2 174611419 174616415 + 4.32325376837917 NA Intergenic Intergenic -29617 NM_001099328 100043757 Mm.48711 NM_001099328 ENSMUSG00000050600 Zfp831 ENSMUSG00000050600|OTTMUSG00000017459 zinc finger protein 831 protein-coding common_peak2_60_538_-0.409622011705533_8.86933045689974_4.32221722594343 chr3 101276109 101279128 + 4.32221722594343 NA intron (NM_013486, intron 4 of 4) intron (NM_013486, intron 4 of 4) 10321 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding common_peak1_219_1697_0.204894897205589_10.8320681921558_4.3217101952951 chr14 67932312 67934204 + 4.3217101952951 NA intron (NM_177780, intron 1 of 51) CpG 314 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding common_peak1_14_30_1.22784781102447_5.56812021589911_4.32109183480444 chr1 79710814 79711209 + 4.32109183480444 NA intron (NM_001111279, intron 8 of 11) intron (NM_001111279, intron 8 of 11) -39039 NM_183027 252903 Mm.32409 NM_183027 ENSMUSG00000054702 Ap1s3 1190009B22|Jr2|[s]3A adaptor-related protein complex AP-1, sigma 3 protein-coding common_peak1_14_30_1.22784781102447_5.56812021589911_4.32109183480444-2 chr2 34956350 34956781 + 4.32109183480444 NA intron (NM_009421, intron 5 of 10) intron (NM_009421, intron 5 of 10) 5207 NM_009421 22029 Mm.239514 NM_009421 ENSMUSG00000026875 Traf1 4732496E14Rik TNF receptor-associated factor 1 protein-coding unique_peak1_14_30_1.22784781102447_5.56812021589911_4.32109183480444 chr17 6996242 6996550 + 4.32109183480444 NA intron (NM_026611, intron 7 of 8) intron (NM_026611, intron 7 of 8) 17536 NM_026611 68195 Mm.181237 NM_026611 ENSMUSG00000094724 Rnaset2b 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2B protein-coding common_peak1_202_1526_0.215715076981187_10.6843418852874_4.32053322985858 chr18 60773969 60775596 + 4.32053322985858 NA intron (NM_020600, intron 1 of 4) CpG 186 NM_020600 20044 Mm.43778 NM_020600 ENSMUSG00000024608 Rps14 2600014J02Rik|AL023078 ribosomal protein S14 protein-coding unique_peak2_32_116_0.706955228077475_7.22384233362214_4.32025728764855 chr10 18196772 18197736 + 4.32025728764855 NA intron (NM_001195036, intron 3 of 20) intron (NM_001195036, intron 3 of 20) 13636 NM_001195036 100045792 Mm.380617 NM_001195036 ENSMUSG00000071392 Ect2l C330021H03Rik|ENSMUSG00000071392|Gm10331 epithelial cell transforming sequence 2 oncogene-like protein-coding common_peak2_48_212_0.542166616684846_8.00579292856826_4.32001277060113 chr2 26482810 26484511 + 4.32001277060113 NA intron (NM_008714, intron 4 of 33) intron (NM_008714, intron 4 of 33) -13541 NR_105962 102465602 NR_105962 ENSMUSG00000098548 Mir6996 Gm27531|mmu-mir-6996 microRNA 6996 ncRNA common_peak1_294_2492_0.169964824428645_11.3686495797058_4.31954903791048 chr17 50508950 50511682 + 4.31954903791048 NA intron (NM_013880, intron 1 of 5) intron (NM_013880, intron 1 of 5) 769 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak2_160_1121_0.250139952750185_10.2569269369839_4.31901392331632 chr7 140035463 140037286 + 4.31901392331632 NA promoter-TSS (NM_027201) promoter-TSS (NM_027201) -17 NM_027201 69752 Mm.200818 NM_027201 ENSMUSG00000025470 Zfp511 2410004P19Rik|C86579|Znf511 zinc finger protein 511 protein-coding common_peak2_44_390_-0.484846159742721_8.36860171743599_4.31879376186216 chr4 129364720 129366203 + 4.31879376186216 NA intron (NM_028603, intron 2 of 4) intron (NM_028603, intron 2 of 4) 12567 NM_028603 73680 Mm.32997 NM_028603 ENSMUSG00000028807 Zbtb8a 2410081M15Rik|AI480941 zinc finger and BTB domain containing 8a protein-coding common_peak2_34_127_0.681445714523534_7.34072285726177_4.31775884420191-2 chr11 121420934 121421986 + 4.31775884420191 NA promoter-TSS (NM_181420) promoter-TSS (NM_181420) 87 NM_181420 238024 Mm.117394 NM_181420 ENSMUSG00000039253 Fn3krp FN3K-RP fructosamine 3 kinase related protein protein-coding common_peak2_34_127_0.681445714523534_7.34072285726177_4.31775884420191 chr10 19612928 19613966 + 4.31775884420191 NA Intergenic MTE-int|LTR|ERVL-MaLR -8581 NM_178258 237310 Mm.331979 NM_178258 ENSMUSG00000039760 Il22ra2 CRF2-10|CRF2-s1|CRF2X|Il-22bp interleukin 22 receptor, alpha 2 protein-coding common_peak2_34_127_0.681445714523534_7.34072285726177_4.31775884420191-3 chr7 120853521 120854530 + 4.31775884420191 NA intron (NM_001267711, intron 1 of 17) RSINE1|SINE|B4 2836 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak1_33_293_-0.569523772675836_7.91491045849845_4.31766566983848 chr11 106751049 106751678 + 4.31766566983848 NA exon (NM_001271372, exon 1 of 7) exon (NM_001271372, exon 1 of 7) 137 NM_001033435 380732 Mm.343952 NM_001033435 ENSMUSG00000040528 Milr1 Allergin-1|Gm885|Mca32 mast cell immunoglobulin like receptor 1 protein-coding common_peak1_379_3459_0.145138090123835_11.829125367586_4.31746491799272 chr3 19309523 19312445 + 4.31746491799272 NA exon (NM_001122759, exon 1 of 13) exon (NM_001122759, exon 1 of 13) 338 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak1_362_3992_-0.142555995844315_11.8919793587109_4.31584197298256 chr1 170974798 170978882 + 4.31584197298256 NA promoter-TSS (NM_010187) promoter-TSS (NM_010187) -769 NM_010187 14130 Mm.425062 NM_010187 ENSMUSG00000026656 Fcgr2b AI528646|CD32|F630109E10Rik|Fc[g]RII|FcgRII|Fcgr2|Fcgr2a|Fcr-2|Fcr-3|Ly-17|Ly-m20|LyM-1|Lym-1|fcRII Fc receptor, IgG, low affinity IIb protein-coding common_peak2_278_2317_0.176286386034402_11.2668080440237_4.31583379981709 chr4 148625362 148627695 + 4.31583379981709 NA intron (NR_131120, intron 1 of 7) CpG 468 NR_027864 230908 Mm.22453 NM_145556 ENSMUSG00000041459 Tardbp 1190002A23Rik|C85084|TDP-43|Tdp43 TAR DNA binding protein protein-coding common_peak2_228_2341_-0.188057465743043_11.0994966276297_4.31516588871317 chr12 4233165 4235029 + 4.31516588871317 NA promoter-TSS (NM_001204912) promoter-TSS (NM_001204912) 70 NM_001204912 69709 Mm.250552 NM_001204912 ENSMUSG00000096199 Ptrhd1 2410017P09Rik peptidyl-tRNA hydrolase domain containing 1 protein-coding unique_peak1_17_42_1.07842060717057_5.96547505828738_4.31498806828239 chr1 138596083 138596621 + 4.31498806828239 NA intron (NM_001311148, intron 1 of 7) intron (NM_001311148, intron 1 of 7) 23405 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak1_17_42_1.07842060717057_5.96547505828738_4.31498806828239 chr4 133755214 133755616 + 4.31498806828239 NA Intergenic Intergenic -1804 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding common_peak2_84_469_0.375124901287492_9.06407939720875_4.31351909418091 chr4 99928982 99930505 + 4.31351909418091 NA exon (NM_028132, exon 1 of 11) exon (NM_028132, exon 1 of 11) 292 NM_028132 72157 Mm.217764 NM_028132 ENSMUSG00000025791 Pgm2 2610020G18Rik|AA407108|AI098105|Pgm-2|Pgm1 phosphoglucomutase 2 protein-coding common_peak1_112_1052_-0.284770222853316_9.89790460959906_4.31314639117909 chr7 28371970 28373418 + 4.31314639117909 NA promoter-TSS (NM_138752) promoter-TSS (NM_138752) -32 NM_001083912 101497 Mm.235700 NM_138752 ENSMUSG00000037552 Plekhg2 AI194308|Clg|Cslg pleckstrin homology domain containing, family G (with RhoGef domain) member 2 protein-coding common_peak1_23_69_0.884492451147128_6.57152924251853_4.31192135482289 chr4 15994507 15995000 + 4.31192135482289 NA Intergenic RLTR19|LTR|ERVK 19124 NM_145950 209212 Mm.46455 NM_145950 ENSMUSG00000041153 Osgin2 BC010311|C230027H09Rik oxidative stress induced growth inhibitor family member 2 protein-coding common_peak1_23_69_0.884492451147128_6.57152924251853_4.31192135482289-2 chr5 118459278 118459849 + 4.31192135482289 NA Intergenic Intergenic -101156 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding unique_peak2_12_118_-0.966008829853367_6.41181334838126_4.31190347189535 chr4 83354110 83354904 + 4.31190347189535 NA Intergenic Intergenic -30318 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak2_69_356_0.428277761680791_8.69391914486949_4.30965165036005 chr9 107279319 107280975 + 4.30965165036005 NA intron (NM_001316691, intron 1 of 7) intron (NM_001316691, intron 1 of 7) 9249 NM_001316691 102626 Mm.222612 NM_178907 ENSMUSG00000032577 Mapkapk3 3PK|AI874665|MAPKAP-K3|MAPKAP3|MK-3|MK3|MapkKapk3 mitogen-activated protein kinase-activated protein kinase 3 protein-coding common_peak2_72_652_-0.368620155160803_9.16662910396603_4.30884713744302 chr6 126938990 126940920 + 4.30884713744302 NA promoter-TSS (NM_009013) promoter-TSS (NM_009013) -11 NM_138594 28040 Mm.44228 NM_138594 ENSMUSG00000030347 D6Wsu163e C12orf4 DNA segment, Chr 6, Wayne State University 163, expressed protein-coding common_peak1_72_652_-0.368620155160803_9.16662910396603_4.30884713744302 chr7 43312440 43313228 + 4.30884713744302 NA intron (NM_027264, intron 1 of 4) CpG 427 NM_027264 69930 Mm.45367 NM_027264 ENSMUSG00000012640 Zfp715 2610041B18Rik|mszf15 zinc finger protein 715 protein-coding common_peak2_545_5508_0.115517122494596_12.4853333088124_4.30596797909436 chr10 19590766 19598592 + 4.30596797909436 NA intron (NM_010511, intron 1 of 6) intron (NM_010511, intron 1 of 6) 2721 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak2_76_408_0.400764507831317_8.87633928685741_4.30513893370544 chr8 13659626 13661695 + 4.30513893370544 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 16927 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_36_139_0.650500634266444_7.45453333407819_4.30393841562133-2 chr19 12595636 12596557 + 4.30393841562133 NA non-coding (NR_015503, exon 1 of 2) non-coding (NR_015503, exon 1 of 2) 470 NR_015503 74333 Mm.329744 NR_015503 ENSMUSG00000086213 A330040F15Rik - RIKEN cDNA A330040F15 gene ncRNA common_peak1_36_139_0.650500634266444_7.45453333407819_4.30393841562133-3 chr8 83779311 83780113 + 4.30393841562133 NA Intergenic Intergenic -38401 NM_001163031 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak1_36_139_0.650500634266444_7.45453333407819_4.30393841562133-2 chr8 70659234 70659956 + 4.30393841562133 NA intron (NM_023217, intron 1 of 4) CpG 143 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak2_36_139_0.650500634266444_7.45453333407819_4.30393841562133 chr12 84773272 84774009 + 4.30393841562133 NA promoter-TSS (NM_023409) promoter-TSS (NM_023409) 370 NM_028863 74316 Mm.25719 NM_028863 ENSMUSG00000021241 Isca2 0710001C05Rik|5730594E03Rik|Hbld1 iron-sulfur cluster assembly 2 protein-coding common_peak1_36_139_0.650500634266444_7.45453333407819_4.30393841562133 chr10 39414091 39414834 + 4.30393841562133 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 44663 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak1_15_34_1.1669702461802_5.71276814003507_4.30237878344897-2 chr18 56455875 56456232 + 4.30237878344897 NA intron (NM_026240, intron 1 of 13) intron (NM_026240, intron 1 of 13) 23921 NM_026240 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|NS3TP2 GRAM domain containing 3 protein-coding unique_peak1_15_34_1.1669702461802_5.71276814003507_4.30237878344897 chr12 108333477 108333855 + 4.30237878344897 NA promoter-TSS (NM_010010) promoter-TSS (NM_010010) -715 NM_010010 13116 Mm.41911 NM_010010 ENSMUSG00000021259 Cyp46a1 Cyp46 cytochrome P450, family 46, subfamily a, polypeptide 1 protein-coding common_peak2_281_2976_-0.165765591472379_11.4567607105018_4.30227072176759 chr11 95308586 95311369 + 4.30227072176759 NA intron (NM_001195003, intron 1 of 14) CpG 269 NM_001195004 217127 Mm.90213 NM_177619 ENSMUSG00000038909 Kat7 Hbo1|Hboa|Myst2 K(lysine) acetyltransferase 7 protein-coding unique_peak2_25_225_-0.664757717774256_7.48780010352806_4.30219106071494 chr18 34408949 34409971 + 4.30219106071494 NA promoter-TSS (NM_016927) promoter-TSS (NM_016927) 37 NM_016927 53871 Mm.445792 NM_016927 ENSMUSG00000014503 Pkd2l2 TRPP5 polycystic kidney disease 2-like 2 protein-coding common_peak2_248_2577_-0.17839616304002_11.2428384668416_4.30215686997856 chr11 73130721 73134984 + 4.30215686997856 NA intron (NM_172944, intron 24 of 25) intron (NM_172944, intron 24 of 25) 5442 NM_010353 14841 Mm.42045 NM_010353 ENSMUSG00000050107 Gsg2 Haspin germ cell associated 2, haspin protein-coding common_peak1_16_38_1.11813404211192_5.84446923991821_4.30177611244141 chr2 173678905 173679285 + 4.30177611244141 NA intron (NM_024436, intron 2 of 6) intron (NM_024436, intron 2 of 6) 19250 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding unique_peak1_16_38_1.11813404211192_5.84446923991821_4.30177611244141 chr2 52573490 52573954 + 4.30177611244141 NA intron (NM_001285426, intron 2 of 13) intron (NM_001285426, intron 2 of 13) -15111 NM_001285427 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding unique_peak1_16_38_1.11813404211192_5.84446923991821_4.30177611244141-2 chr2 132733607 132734006 + 4.30177611244141 NA intron (NM_028637, intron 2 of 2) ORR1D2|LTR|ERVL-MaLR 43523 NM_028637 73747 Mm.284114 NM_028637 ENSMUSG00000044991 1110034G24Rik - RIKEN cDNA 1110034G24 gene protein-coding common_peak2_175_1263_0.235853928075917_10.4217077122151_4.3015272969104 chr15 58932798 58934347 + 4.3015272969104 NA promoter-TSS (NM_023172) promoter-TSS (NM_023172) 158 NM_175151 69694 Mm.383230 NM_175151 ENSMUSG00000050891 Tatdn1 2310079P03Rik|CDA11 TatD DNase domain containing 1 protein-coding common_peak2_59_286_0.470361817108373_8.40008783522987_4.30132161350155 chr5 24164463 24165500 + 4.30132161350155 NA promoter-TSS (NM_153092) promoter-TSS (NM_153092) 18 NM_153092 231042 Mm.45513 NM_153092 ENSMUSG00000048439 Nupl2 AV116043|CG1|NLP-1|Nlp1 nucleoporin like 2 protein-coding unique_peak2_54_481_-0.431598317844045_8.69709017730794_4.30001363777462 chr2 173017521 173020223 + 4.30001363777462 NA Intergenic Intergenic -3030 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak2_119_755_0.299638630749344_9.71206173959574_4.29784065201558 chr4 21726875 21728580 + 4.29784065201558 NA promoter-TSS (NM_001290422) promoter-TSS (NM_001290422) 26 NM_001290420 51813 Mm.278584 NM_016746 ENSMUSG00000028252 Ccnc AI451004|AU020987|CG1C cyclin C protein-coding common_peak1_67_604_-0.384030448815073_9.04877610775442_4.29762139379398 chr11 72214909 72215789 + 4.29762139379398 NA exon (NM_001163728, exon 1 of 1) exon (NM_001163728, exon 1 of 1) 211 NM_001163728 75304 Mm.340776 NM_001163728 4930563E22Rik - RIKEN cDNA 4930563E22 gene protein-coding common_peak2_220_1708_0.203604494372865_10.8407389288626_4.29760699002122 chr11 65806048 65808011 + 4.29760699002122 NA promoter-TSS (NM_001302375) promoter-TSS (NM_001302375) -146 NM_001302374 52712 Mm.340052 NM_026107 ENSMUSG00000018347 Zkscan6 1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18 zinc finger with KRAB and SCAN domains 6 protein-coding common_peak2_190_1409_0.222892058700639_10.5729254766365_4.29749712497881 chr6 129607639 129613107 + 4.29749712497881 NA TTS (NM_001083322) TTS (NM_001083322) 12310 NM_033078 27007 Mm.8217 NM_033078 ENSMUSG00000030149 Klrk1 D6H12S2489E|NKG2-D|Nkg2d killer cell lectin-like receptor subfamily K, member 1 protein-coding common_peak1_190_1409_0.222892058700639_10.5729254766365_4.29749712497881 chr14 30625082 30627055 + 4.29749712497881 NA 5' UTR (NM_011103, exon 1 of 18) 5' UTR (NM_011103, exon 1 of 18) 140 NM_011103 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding common_peak2_163_1150_0.245995769305908_10.2916700027852_4.29701130578212 chr10 117791777 117793618 + 4.29701130578212 NA promoter-TSS (NM_134010) promoter-TSS (NM_134010) 8 NM_134010 103468 Mm.12568 NM_134010 ENSMUSG00000052798 Nup107 AW541137|C76801 nucleoporin 107 protein-coding common_peak1_83_759_-0.339156342159736_9.40027743725108_4.29597429349828 chr1 93801234 93802453 + 4.29597429349828 NA promoter-TSS (NM_001105667) promoter-TSS (NM_001105667) 91 NM_023136 21915 Mm.250332 NM_023136 ENSMUSG00000026281 Dtymk AU044245|CDC8|D10Ertd203e|TMPK|TYPK|Tmk|mtmk deoxythymidylate kinase protein-coding unique_peak1_10_16_1.54572259025726_4.86032413637897_4.29352990301916 chr18 14652086 14652466 + 4.29352990301916 NA intron (NM_009280, intron 4 of 10) intron (NM_009280, intron 4 of 10) 30638 NM_001161369 268996 Mm.31761 NM_009280 ENSMUSG00000037013 Ss18 D130059H17|Ssxt|Syt SS18, nBAF chromatin remodeling complex subunit protein-coding common_peak1_70_364_0.421406892079638_8.7224560998072_4.29302847084939 chr16 24909868 24910996 + 4.29302847084939 NA intron (NM_001145952, intron 9 of 11) intron (NM_001145952, intron 9 of 11) -149207 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak1_20_183_-0.746087312258515_7.15051829992776_4.29235074952969-3 chr18 79080785 79081269 + 4.29235074952969 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 28364 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_20_183_-0.746087312258515_7.15051829992776_4.29235074952969-2 chr10 127604659 127605151 + 4.29235074952969 NA intron (NM_008512, intron 6 of 88) intron (NM_008512, intron 6 of 88) 16243 NM_008512 16971 Mm.271854 NM_008512 ENSMUSG00000040249 Lrp1 A2mr|AI316852|CD91|Lrp|b2b1554Clo low density lipoprotein receptor-related protein 1 protein-coding common_peak1_20_183_-0.746087312258515_7.15051829992776_4.29235074952969 chr1 52816302 52816724 + 4.29235074952969 NA intron (NM_008384, intron 1 of 5) intron (NM_008384, intron 1 of 5) 1175 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding common_peak1_85_778_-0.333140036621364_9.43890949975099_4.29186407659748 chr11 83191032 83192189 + 4.29186407659748 NA intron (NM_011409, intron 1 of 2) intron (NM_011409, intron 1 of 2) 280 NM_011409 20557 Mm.290922 NM_011409 ENSMUSG00000018986 Slfn3 - schlafen 3 protein-coding common_peak2_444_4240_0.130935188046072_12.1156563616195_4.29181451839691 chr18 80532731 80538308 + 4.29181451839691 NA Intergenic MLTR11B|LTR|ERVK 9027 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_40_354_-0.510231949326619_8.21655923972873_4.29157034450061 chr13 12565237 12566571 + 4.29157034450061 NA promoter-TSS (NM_026184) promoter-TSS (NM_026184) 21 NM_026184 67475 Mm.358706 NM_026184 ENSMUSG00000057069 Ero1lb 1300013B24Rik|1700065B09Rik|AI447560|Ero1b|ero1-beta ERO1-like beta (S. cerevisiae) protein-coding common_peak2_168_1197_0.241401655740624_10.3471130206591_4.29139583352847 chr7 142059991 142061940 + 4.29139583352847 NA promoter-TSS (NM_028308) promoter-TSS (NM_028308) 69 NM_028308 101513 Mm.53259 NM_028308 ENSMUSG00000025147 Mob2 1110017M21Rik|2700078K21Rik|AI256456|Mmh MOB kinase activator 2 protein-coding common_peak1_26_84_0.812816630701893_6.81579925148865_4.29130340893612 chr1 181458982 181459601 + 4.29130340893612 NA 3' UTR (NM_001160212, exon 5 of 5) 3' UTR (NM_001160212, exon 5 of 5) 52160 NM_207280 403180 Mm.220754 NM_207280 ENSMUSG00000050625 Ccdc121 6530421E24Rik|Gm755 coiled-coil domain containing 121 protein-coding common_peak1_26_84_0.812816630701893_6.81579925148865_4.29130340893612-2 chr16 92807717 92808178 + 4.29130340893612 NA intron (NM_001111022, intron 2 of 6) MTEb|LTR|ERVL-MaLR 18127 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_179_1302_0.231781891369209_10.4635123142527_4.2912871190596 chr7 143004725 143006858 + 4.2912871190596 NA 5' UTR (NM_020286, exon 1 of 8) 5' UTR (NM_020286, exon 1 of 8) 132 NM_001128081 27027 Mm.28172 NM_020286 ENSMUSG00000000244 Tspan32 AW208513|Art-1|BB235973|D7Wsu37e|Phemx|Tssc6 tetraspanin 32 protein-coding common_peak2_63_565_-0.395180357334002_8.94706806416488_4.29071925653305 chr15 80895360 80898038 + 4.29071925653305 NA intron (NM_144812, intron 14 of 24) intron (NM_144812, intron 14 of 24) -43340 NR_039573 100628612 NR_039573 ENSMUSG00000092868 Mir5113 mir-5113|mmu-mir-5113|mu-mir-5113 microRNA 5113 ncRNA common_peak2_30_267_-0.599406985723466_7.76638569759604_4.29008426996183 chr10 130541633 130542897 + 4.29008426996183 NA Intergenic Intergenic -44886 NM_001103366 625131 Mm.469844 NM_001103366 ENSMUSG00000091511 Vmn2r87 EG625131 vomeronasal 2, receptor 87 protein-coding common_peak1_30_267_-0.599406985723466_7.76638569759604_4.29008426996183 chr17 34069079 34069739 + 4.29008426996183 NA Intergenic Intergenic -22970 NM_008206 15001 Mm.116 NM_008206 ENSMUSG00000024334 H2-Oa H-2Oa histocompatibility 2, O region alpha locus protein-coding common_peak1_140_939_0.270748657014304_10.0118912750722_4.29005277191249 chr1 132476462 132478121 + 4.29005277191249 NA promoter-TSS (NM_172517) promoter-TSS (NM_172517) -76 NM_172517 213464 Mm.132868 NM_172517 ENSMUSG00000026439 Rbbp5 4933411J24Rik|C330016J05 retinoblastoma binding protein 5 protein-coding common_peak2_58_519_-0.416841407986629_8.81394710903514_4.28978166913881 chr19 4037193 4038657 + 4.28978166913881 NA promoter-TSS (NM_013541) promoter-TSS (NM_013541) -13 NM_013541 14870 Mm.299292 NM_013541 ENSMUSG00000060803 Gstp1 GstpiB glutathione S-transferase, pi 1 protein-coding common_peak1_48_426_-0.461216022709806_8.50748424826559_4.28764975833779 chr4 139379735 139380441 + 4.28764975833779 NA promoter-TSS (NM_001160319) promoter-TSS (NM_001160319) -571 NM_001160319 69116 Mm.271956 NM_001160319 ENSMUSG00000066036 Ubr4 1810009A16Rik|A930005E13Rik|D930005K06Rik|Gm1032|Gm1666|N28143|RBAF600|Zubr1|mKIAA0462|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding common_peak2_121_1146_-0.272517913782496_10.0273907191246_4.28677839602511-2 chr2 26915311 26917274 + 4.28677839602511 NA promoter-TSS (NM_013678) promoter-TSS (NM_013678) -129 NM_013678 20931 Mm.389260 NM_013678 ENSMUSG00000014873 Surf2 Surf-2 surfeit gene 2 protein-coding common_peak2_121_1146_-0.272517913782496_10.0273907191246_4.28677839602511 chr17 73248822 73251677 + 4.28677839602511 NA Intergenic Intergenic 142264 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding common_peak2_38_336_-0.523661331573998_8.13477411539486_4.28596762777411 chr13 92273970 92275666 + 4.28596762777411 NA exon (NM_010829, exon 14 of 24) exon (NM_010829, exon 14 of 24) -79965 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding common_peak2_69_622_-0.375030327314112_9.09557318936695_4.2853812789682 chr15 43281754 43282821 + 4.2853812789682 NA intron (NM_008388, intron 1 of 12) CpG 449 NM_008388 16341 Mm.289992 NM_008388 ENSMUSG00000022336 Eif3e 48kDa|Eif3s6|Int6|eIF3-p46|eIF3-p48 eukaryotic translation initiation factor 3, subunit E protein-coding common_peak1_51_454_-0.44768917925877_8.60587814545667_4.2846843092993 chr7 98108610 98109547 + 4.2846843092993 NA intron (NM_001256081, intron 2 of 48) ID_B1|SINE|B4 170 NM_001256082 17921 Mm.1403 NM_008663 ENSMUSG00000030761 Myo7a Hdb|Myo7|USH1B|nmf371|polka|sh-1|sh1 myosin VIIA protein-coding common_peak2_167_1188_0.24177857761191_10.3364222885516_4.28402440145817 chr6 113482233 113484164 + 4.28402440145817 NA promoter-TSS (NM_133930) promoter-TSS (NM_133930) -371 NM_133930 171508 Mm.41593 NM_133930 ENSMUSG00000030284 Creld1 AI843811 cysteine-rich with EGF-like domains 1 protein-coding common_peak1_129_842_0.28413801057717_9.86145782623067_4.28393423171739 chr13 45001193 45002387 + 4.28393423171739 NA intron (NM_025772, intron 1 of 9) CpG 306 NM_025772 94245 Mm.352311 NM_025772 ENSMUSG00000057531 Dtnbp1 5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy dystrobrevin binding protein 1 protein-coding common_peak2_27_241_-0.632298487256669_7.60271399364626_4.28365169314704 chr12 107992453 107993503 + 4.28365169314704 NA intron (NM_001079883, intron 1 of 3) intron (NM_001079883, intron 1 of 3) 10436 NM_001079883 58208 Mm.392694 NM_021399 ENSMUSG00000048251 Bcl11b 9130430L19Rik|AI604821|B630002E05Rik|BCL-11B|Ctip2|Rit1 B cell leukemia/lymphoma 11B protein-coding common_peak1_27_241_-0.632298487256669_7.60271399364626_4.28365169314704 chr11 120729753 120730368 + 4.28365169314704 NA intron (NM_007621, intron 6 of 7) intron (NM_007621, intron 6 of 7) 1961 NM_007621 12409 Mm.21454 NM_007621 ENSMUSG00000025150 Cbr2 MLCR carbonyl reductase 2 protein-coding common_peak1_118_1114_-0.275755624568022_9.98495018252365_4.28171157925261 chr16 93585154 93586598 + 4.28171157925261 NA intron (NM_145482, intron 10 of 11) intron (NM_145482, intron 10 of 11) 17939 NM_145482 224440 Mm.10628 NM_145482 ENSMUSG00000022948 Setd4 AY037804|C21orf18|ORF21 SET domain containing 4 protein-coding common_peak2_197_1478_0.217660437901452_10.6392365560498_4.28138515510594 chr14 30624746 30627288 + 4.28138515510594 NA 5' UTR (NM_011103, exon 1 of 18) 5' UTR (NM_011103, exon 1 of 18) 191 NM_011103 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding common_peak1_172_1235_0.237747503588174_10.3903367796985_4.28098833682682 chr17 55944309 55945847 + 4.28098833682682 NA intron (NM_001310337, intron 1 of 3) CpG 181 NM_146249 240120 Mm.441018 NM_146249 ENSMUSG00000062101 Zfp119b - zinc finger protein 119b protein-coding common_peak1_32_284_-0.577498161391225_7.86606902835649_4.28059508191807 chr11 75913385 75914013 + 4.28059508191807 NA intron (NM_001291159, intron 1 of 4) intron (NM_001291159, intron 1 of 4) -2640 NM_029548 380714 Mm.425697 NM_029548 ENSMUSG00000020847 Rph3al Gm1753|Noc2 rabphilin 3A-like (without C2 domains) protein-coding common_peak1_156_1521_-0.234277009097896_10.4546141389546_4.28026222643918 chr16 32129146 32130984 + 4.28026222643918 NA Intergenic Intergenic 30263 NM_025892 66994 Mm.22990 NM_025892 ENSMUSG00000035790 Cep19 1500031L02Rik|AI428934|AL022620 centrosomal protein 19 protein-coding common_peak2_95_556_0.345466573124776_9.29426680390242_4.27977361070962 chr9 55511203 55512481 + 4.27977361070962 NA intron (NM_145615, intron 1 of 11) CpG 401 NM_145615 110842 Mm.290853 NM_145615 ENSMUSG00000032314 Etfa 2010200I21Rik|D9Ertd394e electron transferring flavoprotein, alpha polypeptide protein-coding common_peak2_96_564_0.34323130606086_9.31372271033298_4.27866849869852 chr11 100471868 100473405 + 4.27866849869852 NA exon (NM_172565, exon 1 of 2) exon (NM_172565, exon 1 of 2) 146 NM_172565 217194 Mm.183320 NM_172565 ENSMUSG00000048732 Klhl11 BC011167 kelch-like 11 protein-coding common_peak2_96_564_0.34323130606086_9.31372271033298_4.27866849869852-2 chr6 108782896 108784074 + 4.27866849869852 NA intron (NM_026011, intron 1 of 6) CpG 426 NM_026011 67166 Mm.271178 NM_026011 ENSMUSG00000030105 Arl8b 2610313E07Rik|3100002J04Rik|Arl10c|gie1 ADP-ribosylation factor-like 8B protein-coding common_peak1_18_166_-0.783340089077162_6.99203424793547_4.27835784095957 chr2 45103294 45103628 + 4.27835784095957 NA intron (NM_001289521, intron 1 of 8) intron (NM_001289521, intron 1 of 8) 6816 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak2_192_1429_0.221005860780506_10.592302362056_4.27784900132325 chr10 80928527 80931473 + 4.27784900132325 NA promoter-TSS (NM_008655) promoter-TSS (NM_008655) -91 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding unique_peak2_59_528_-0.411855168329966_8.84119632794904_4.27720609621986 chr2 31130283 31133145 + 4.27720609621986 NA intron (NM_001177648, intron 1 of 16) (CA)n|Simple_repeat|Simple_repeat 10294 NM_001177649 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak2_41_169_0.594696018847153_7.70673894556128_4.2769847066152 chr8 114133380 114134211 + 4.2769847066152 NA 5' UTR (NM_001290181, exon 1 of 4) 5' UTR (NM_001290181, exon 1 of 4) 221 NM_024437 67528 Mm.27889 NM_024437 ENSMUSG00000031767 Nudt7 1300007B24Rik|2210404C19Rik nudix (nucleoside diphosphate linked moiety X)-type motif 7 protein-coding common_peak2_187_1380_0.224858105540681_10.5439266570284_4.27639704535757 chr7 4081329 4083901 + 4.27639704535757 NA intron (NR_033568, intron 6 of 8) intron (NR_033568, intron 6 of 8) -19411 NM_001302676 52855 Mm.290880 NM_178611 ENSMUSG00000055541 Lair1 5133400O11Rik|BB115266|D7Bwg0421e|Lair-1 leukocyte-associated Ig-like receptor 1 protein-coding common_peak2_52_462_-0.439126617817124_8.63530507435167_4.27536959843183 chr15 80582062 80583864 + 4.27536959843183 NA intron (NM_001289442, intron 1 of 7) intron (NM_001289442, intron 1 of 7) 10366 NM_001289442 17444 Mm.12947 NM_010815 ENSMUSG00000042351 Grap2 GRAP-2|GRB2L|GRBLG|GRID|Gads|GrbX|Grf40|GrpL|Mona|P38 GRB2-related adaptor protein 2 protein-coding common_peak2_114_1072_-0.280867969784692_9.92700037586417_4.27486349434128 chr17 56608517 56610526 + 4.27486349434128 NA intron (NM_153152, intron 1 of 3) intron (NM_153152, intron 1 of 3) 250 NM_153152 224904 Mm.34002 NM_153152 ENSMUSG00000049760 2410015M20Rik Mic13|QIL1|sr104 RIKEN cDNA 2410015M20 gene protein-coding common_peak1_103_621_0.327875096883041_9.44470831857212_4.2747099742364 chr15 41446626 41448004 + 4.2747099742364 NA promoter-TSS (NM_001130166) promoter-TSS (NM_001130166) -167 NM_001130166 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_103_621_0.327875096883041_9.44470831857212_4.2747099742364-2 chr2 153224671 153225938 + 4.2747099742364 NA exon (NM_198617, exon 1 of 1) exon (NM_198617, exon 1 of 1) 137 NM_198617 241732 Mm.277243 NM_198617 ENSMUSG00000074671 Tspyl3 AW212607|Gm36 TSPY-like 3 protein-coding common_peak1_66_335_0.438226277370964_8.61143056146424_4.27452028708979 chr1 43535634 43537145 + 4.27452028708979 NA intron (NM_010879, intron 3 of 4) intron (NM_010879, intron 3 of 4) 90638 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_270_2232_0.178699997524934_11.2141175345849_4.27441922757804 chr4 8910974 8914028 + 4.27441922757804 NA Intergenic Intergenic 222095 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_115_1083_-0.28026110446859_9.94201848911958_4.27427880320491 chr19 23322192 23323388 + 4.27427880320491 NA intron (NM_174857, intron 11 of 13) intron (NM_174857, intron 11 of 13) -48893 NM_001252684 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding common_peak2_90_828_-0.322883248775703_9.5337866671079_4.27417533249061 chr16 78198901 78201266 + 4.27417533249061 NA Intergenic Intergenic 55371 NR_045698 100503619 Mm.387531 NR_045698 ENSMUSG00000109841 E330011O21Rik - RIKEN cDNA E330011O21 gene ncRNA common_peak2_102_613_0.329453038406561_9.42682136457346_4.27346456960736 chr4 115737446 115738598 + 4.27346456960736 NA promoter-TSS (NM_172698) promoter-TSS (NM_172698) -51 NM_172698 230648 Mm.283565 NM_172698 ENSMUSG00000034210 Efcab14 4732418C07Rik EF-hand calcium binding domain 14 protein-coding common_peak2_78_709_-0.349576123278728_9.29688715275268_4.27345757025419 chr13 3636032 3637732 + 4.27345757025419 NA intron (NM_001267724, intron 1 of 3) intron (NM_001267724, intron 1 of 3) 2850 NM_001267724 142688 Mm.253061 NM_178283 ENSMUSG00000033781 Asb13 2210015B19Rik|6430573K02Rik|Asb-13|C85285 ankyrin repeat and SOCS box-containing 13 protein-coding common_peak2_126_816_0.288018426028362_9.81820148115986_4.27286101659882 chr3 96103936 96105489 + 4.27286101659882 NA 5' UTR (NM_001025613, exon 1 of 13) 5' UTR (NM_001025613, exon 1 of 13) 185 NM_001025614 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding common_peak2_72_379_0.412463418054681_8.77608731735829_4.2722036895495 chr13 67450952 67452216 + 4.2722036895495 NA promoter-TSS (NM_177712) promoter-TSS (NM_177712) 40 NM_177712 238692 Mm.486478 NM_177712 ENSMUSG00000069206 Zfp874a C330011K17Rik|Rslcan15|Zfp874 zinc finger protein 874a protein-coding common_peak1_91_838_-0.320841573973601_9.55210621345302_4.27177213993187 chr10 75517509 75518677 + 4.27177213993187 NA promoter-TSS (NM_026095) promoter-TSS (NM_026095) 51 NM_026095 67332 Mm.45151 NM_026095 ENSMUSG00000020180 Snrpd3 1700043E15Rik|2310009E13Rik|AW046420|SMD3 small nuclear ribonucleoprotein D3 protein-coding common_peak1_191_1419_0.221937187259119_10.5826438080216_4.27145200920974 chr2 35660903 35662586 + 4.27145200920974 NA intron (NM_001290641, intron 3 of 15) CpG-8041 -30250 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_44_187_0.571589785886994_7.84038374462113_4.27112393319815 chr1 53837791 53838835 + 4.27112393319815 NA intron (NM_001001883, intron 23 of 28) intron (NM_001001883, intron 23 of 28) -11111 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA common_peak2_92_848_-0.318804022665448_9.57021873222032_4.26971409675399 chr10 127106728 127109283 + 4.26971409675399 NA intron (NM_001171026, intron 5 of 14) ID_B1|SINE|B4 13155 NM_177614 216440 Mm.295246 NM_177614 ENSMUSG00000040462 Os9 4632413K17Rik|AU022351 amplified in osteosarcoma protein-coding unique_peak2_23_207_-0.686664250048997_7.35710759311659_4.26904547395919 chr1 55209943 55211061 + 4.26904547395919 NA intron (NM_028713, intron 3 of 8) MT2A|LTR|ERVL 16280 NM_028713 74013 Mm.292050 NM_028713 ENSMUSG00000025978 Rftn2 2700010E02Rik|3222401M22Rik raftlin family member 2 protein-coding common_peak2_23_207_-0.686664250048997_7.35710759311659_4.26904547395919 chr10 82127772 82128539 + 4.26904547395919 NA intron (NM_001163064, intron 1 of 3) CpG 142 NM_001163064 216177 Mm.482395 NM_001163064 ENSMUSG00000078435 AU041133 - expressed sequence AU041133 protein-coding unique_peak2_23_207_-0.686664250048997_7.35710759311659_4.26904547395919-2 chr2 92455937 92457785 + 4.26904547395919 NA intron (NM_145832, intron 2 of 2) PB1|SINE|Alu 2933 NM_211358 228368 Mm.273990 NM_145832 ENSMUSG00000049922 Slc35c1 E430007K15Rik|fuct1 solute carrier family 35, member C1 protein-coding common_peak2_181_1322_0.229360007627726_10.4842773500925_4.268836180117 chr11 98192215 98194205 + 4.268836180117 NA promoter-TSS (NM_001080118) promoter-TSS (NM_001080118) 83 NM_134027 19014 Mm.12926 NM_013634 ENSMUSG00000018160 Med1 AI480703|CRSP210|DRIP205|PBP|Pparbp|TRAP220|l11Jus15 mediator complex subunit 1 protein-coding common_peak1_71_641_-0.368519502876923_9.14216973568384_4.26839296010087 chr4 107367507 107368242 + 4.26839296010087 NA promoter-TSS (NM_028355) promoter-TSS (NM_028355) 90 NM_028355 72787 Mm.28478 NM_028355 ENSMUSG00000028614 Ndc1 2810475A17Rik|AI450313|Tmem48|sks NDC1 transmembrane nucleoporin protein-coding common_peak1_56_499_-0.421285565111914_8.75514150210613_4.26837788416892 chr16 10411506 10412405 + 4.26837788416892 NA promoter-TSS (NM_011955) promoter-TSS (NM_011955) 17 NM_011955 26425 Mm.29037 NM_011955 ENSMUSG00000022503 Nubp1 - nucleotide binding protein 1 protein-coding common_peak2_94_868_-0.314742576539189_9.60584107854481_4.2665830342679 chr11 75629744 75631689 + 4.2665830342679 NA promoter-TSS (NM_008916) promoter-TSS (NM_008916) -304 NM_008916 19062 Mm.1458 NM_008916 ENSMUSG00000006127 Inpp5k C62|Pps|SKIP inositol polyphosphate 5-phosphatase K protein-coding common_peak1_217_2210_-0.192128763100234_11.0144189282661_4.26576546506677 chr9 116365350 116367849 + 4.26576546506677 NA Intergenic Intergenic -191236 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak2_60_537_-0.406942911509651_8.8679909068018_4.26555070849958 chr12 84416941 84417947 + 4.26555070849958 NA exon (NM_025525, exon 1 of 1) exon (NM_025525, exon 1 of 1) 244 NM_025525 66381 Mm.24846 NM_025525 ENSMUSG00000098134 Rnf113a2 2310020H19Rik|AI426758|Rnf113a ring finger protein 113A2 protein-coding common_peak2_60_537_-0.406942911509651_8.8679909068018_4.26555070849958-3 chrX 109011779 109014269 + 4.26555070849958 NA intron (NM_016710, intron 1 of 5) intron (NM_016710, intron 1 of 5) 356 NM_016710 50887 Mm.298443 NM_016710 ENSMUSG00000031245 Hmgn5 GARP45|NBP-45|Nsbp1 high-mobility group nucleosome binding domain 5 protein-coding common_peak2_60_537_-0.406942911509651_8.8679909068018_4.26555070849958-2 chr7 114170979 114173037 + 4.26555070849958 NA Intergenic Intergenic -54227 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak2_31_111_0.71551065225392_7.16511024818456_4.26471408205403 chr1 21829491 21830212 + 4.26471408205403 NA intron (NM_001310477, intron 1 of 12) intron (NM_001310477, intron 1 of 12) 132091 NM_001160139 226922 Mm.336519 NM_023872 ENSMUSG00000028033 Kcnq5 7730402H11|9230107O05Rik|AA589396|D1Mgi1 potassium voltage-gated channel, subfamily Q, member 5 protein-coding common_peak2_31_111_0.71551065225392_7.16511024818456_4.26471408205403-2 chr3 69464977 69465865 + 4.26471408205403 NA intron (NM_178726, intron 1 of 3) MTC|LTR|ERVL-MaLR 133539 NM_020026 26879 Mm.153710 NM_020026 ENSMUSG00000043300 B3galnt1 B3galt3|b3GT3 UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1 protein-coding common_peak1_31_111_0.71551065225392_7.16511024818456_4.26471408205403 chr11 94995513 94996310 + 4.26471408205403 NA intron (NM_172261, intron 1 of 9) intron (NM_172261, intron 1 of 9) 4699 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding common_peak1_31_111_0.71551065225392_7.16511024818456_4.26471408205403-2 chr9 116083792 116084554 + 4.26471408205403 NA Intergenic ORR1E|LTR|ERVL-MaLR 91190 NM_029575 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak2_49_435_-0.455556821454186_8.54040591404983_4.26465058183123 chr2 181319203 181320353 + 4.26465058183123 NA promoter-TSS (NM_001166667) promoter-TSS (NM_001166667) 54 NM_001001882 269400 Mm.11333 NM_001001882 ENSMUSG00000038685 Rtel1 AI451565|AW540478|Rtel regulator of telomere elongation helicase 1 protein-coding common_peak1_17_158_-0.808197593411689_6.90878415857851_4.26444792917524 chr2 155554891 155555311 + 4.26444792917524 NA intron (NR_040613, intron 2 of 3) intron (NR_040613, intron 2 of 3) 1829 NR_040613 74945 Mm.401956 NR_040613 ENSMUSG00000086529 Acss2os 4930471I20Rik acyl-CoA synthetase short-chain family member 2, opposite strand ncRNA unique_peak2_17_158_-0.808197593411689_6.90878415857851_4.26444792917524 chr11 70815110 70816327 + 4.26444792917524 NA Intergenic RLTR34C_MM|LTR|ERVK -3157 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak1_35_133_0.665208482601251_7.3986934317584_4.26426146497554 chr10 21160963 21161509 + 4.26426146497554 NA promoter-TSS (NM_010848) promoter-TSS (NM_010848) -252 NM_010848 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding common_peak2_39_157_0.613965790640029_7.61076364349712_4.26337688209398 chr10 96724496 96725637 + 4.26337688209398 NA Intergenic Intergenic 108065 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_159_1553_-0.230799627217866_10.4863709747988_4.26330788619493 chr1 172147290 172149025 + 4.26330788619493 NA 5' UTR (NM_153555, exon 1 of 14) 5' UTR (NM_153555, exon 1 of 14) 142 NM_153555 98193 Mm.159915 NM_153555 ENSMUSG00000026554 Dcaf8 AA408877|AA433120|AA792214|AU018973|C76055|D1Dau35e|D1Ucla4|H326|Wdr42a DDB1 and CUL4 associated factor 8 protein-coding unique_peak2_14_134_-0.894771475639483_6.62942985923109_4.26298935820362 chrX 137049485 137050177 + 4.26298935820362 NA 5' UTR (NM_146261, exon 1 of 6) 5' UTR (NM_146261, exon 1 of 6) 237 NM_146261 245622 Mm.260106 NM_146261 ENSMUSG00000042595 Fam199x - family with sequence similarity 199, X-linked protein-coding common_peak1_246_2552_-0.178608703935396_11.2286734704394_4.26059928931854 chr9 106787837 106789794 + 4.26059928931854 NA intron (NM_030730, intron 1 of 21) intron (NM_030730, intron 1 of 21) 398 NM_030730 81000 Mm.246689 NM_030730 ENSMUSG00000040661 Rad54l2 Arip4|D130058C05|G630026H09Rik|Srisnf2l RAD54 like 2 (S. cerevisiae) protein-coding common_peak1_152_1477_-0.237625260865411_10.4106179237134_4.25948741248487 chr12 113154676 113156256 + 4.25948741248487 NA promoter-TSS (NM_134041) promoter-TSS (NM_134041) -955 NM_134041 104732 Mm.87616 NM_134041 ENSMUSG00000037466 4930427A07Rik AA536649|mFLJ00116 RIKEN cDNA 4930427A07 gene protein-coding common_peak2_216_2198_-0.192413574855193_11.0064251014274_4.25895655626462 chr12 32953029 32955449 + 4.25895655626462 NA promoter-TSS (NM_198710) promoter-TSS (NM_198710) 53 NM_198710 19027 Mm.246304 NM_013635 ENSMUSG00000020570 Sypl AI314763|AI604763|D12Ertd446e|PanI|Pphn|Sypl1 synaptophysin-like protein protein-coding common_peak2_37_145_0.637151955703229_7.50840053673163_4.25844465350938 chr13 24524589 24525408 + 4.25844465350938 NA Intergenic L1MB7|LINE|L1 -57191 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_37_145_0.637151955703229_7.50840053673163_4.25844465350938 chr10 21077096 21077679 + 4.25844465350938 NA intron (NM_001177776, intron 6 of 6) intron (NM_001177776, intron 6 of 6) 36567 NM_001177776 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak1_29_258_-0.608151855088852_7.71273236014213_4.25813577503027-2 chr4 88045811 88046433 + 4.25813577503027 NA Intergenic B4A|SINE|B4 -12715 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak1_29_258_-0.608151855088852_7.71273236014213_4.25813577503027 chr10 80164592 80165163 + 4.25813577503027 NA intron (NR_038088, intron 1 of 4) intron (NR_038088, intron 1 of 4) -2964 NM_007705 12696 Mm.17898 NM_007705 ENSMUSG00000045193 Cirbp Cirp|R74941 cold inducible RNA binding protein protein-coding unique_peak2_29_258_-0.608151855088852_7.71273236014213_4.25813577503027 chr6 50187543 50188765 + 4.25813577503027 NA intron (NM_001164734, intron 11 of 13) intron (NM_001164734, intron 11 of 13) 73615 NM_018769 54722 Mm.248361 NM_018769 ENSMUSG00000029821 Dfna5 2310037D07Rik|4932441K13Rik|Dfna5h|EG14210|Fin15 deafness, autosomal dominant 5 (human) protein-coding common_peak2_53_471_-0.43382317133589_8.66573146369389_4.25718875194504 chr9 113929589 113930919 + 4.25718875194504 NA promoter-TSS (NM_001083319) promoter-TSS (NM_001083319) -680 NM_001083319 22221 Mm.28052 NM_013699 ENSMUSG00000009741 Ubp1 Cp2b|LBP-1a|LBP-1b|NF2d9 upstream binding protein 1 protein-coding common_peak2_483_4724_0.123692853012361_12.267945040502_4.25664925470809 chr1 172499048 172503953 + 4.25664925470809 NA intron (NM_178598, intron 1 of 4) intron (NM_178598, intron 1 of 4) 1254 NM_178598 21346 Mm.271711 NM_178598 ENSMUSG00000026547 Tagln2 2700094C18Rik|SM22beta|Sm22B|Sm22a transgelin 2 protein-coding common_peak1_16_150_-0.834868478350907_6.82097050014963_4.25642888690856-2 chrX 164027608 164028107 + 4.25642888690856 NA intron (NM_181315, intron 1 of 7) intron (NM_181315, intron 1 of 7) 153 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak1_16_150_-0.834868478350907_6.82097050014963_4.25642888690856 chr17 28693718 28694129 + 4.25642888690856 NA intron (NM_001168514, intron 2 of 12) L1ME4b|LINE|L1 1355 NM_001168513 26416 Mm.311337 NM_011951 ENSMUSG00000053436 Mapk14 CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha mitogen-activated protein kinase 14 protein-coding common_peak2_120_764_0.297250907055433_9.72794139110773_4.25546884875133 chr9 114780225 114782435 + 4.25546884875133 NA intron (NM_001252479, intron 1 of 3) CpG 663 NM_133978 102545 Mm.35600 NM_133978 ENSMUSG00000032436 Cmtm7 AI481279|Cklfsf7|LNV CKLF-like MARVEL transmembrane domain containing 7 protein-coding unique_peak2_15_142_-0.863618073653221_6.72806229995178_4.25545166733327 chr16 4756654 4757336 + 4.25545166733327 NA intron (NM_010443, intron 1 of 5) intron (NM_010443, intron 1 of 5) 15382 NM_010443 15369 Mm.272866 NM_010443 ENSMUSG00000004070 Hmox2 HO-2|HO2 heme oxygenase 2 protein-coding common_peak2_281_2974_-0.164796038317011_11.4562759339242_4.25409929941938 chr19 4096168 4101371 + 4.25409929941938 NA 3' UTR (NM_026373, exon 4 of 4) 3' UTR (NM_026373, exon 4 of 4) -1229 NR_075078 18739 Mm.1860 NM_008851 ENSMUSG00000024851 Pitpnm1 DRES9|Mpt-1|Nir-2|PITPnm 1|Pitpnm|R75447|Rd9|RdgB|RdgB1 phosphatidylinositol transfer protein, membrane-associated 1 protein-coding common_peak2_84_470_0.372058598239708_9.06561254873264_4.25296197321308 chr6 4086088 4087384 + 4.25296197321308 NA intron (NM_009748, intron 1 of 3) intron (NM_009748, intron 1 of 3) 191 NM_009748 12068 Mm.286457 NM_009748 ENSMUSG00000032757 Bet1 AW555236|Bet-1 Bet1 golgi vesicular membrane trafficking protein protein-coding common_peak2_207_2094_-0.197476350386713_10.9339963533934_4.25211270398353 chr6 108670235 108673829 + 4.25211270398353 NA Intergenic ID_B1|SINE|B4 -11098 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_226_1771_0.198781858432714_10.8905538177714_4.25157927955477 chr11 21568441 21572973 + 4.25157927955477 NA intron (NM_001316675, intron 1 of 8) intron (NM_001316675, intron 1 of 8) 1227 NM_008618 17449 Mm.212703 NM_008618 ENSMUSG00000020321 Mdh1 B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2 malate dehydrogenase 1, NAD (soluble) protein-coding common_peak1_22_65_0.894066684735057_6.49142746172598_4.25069040775215 chr10 6978521 6979013 + 4.25069040775215 NA intron (NM_001033391, intron 2 of 7) intron (NM_001033391, intron 2 of 7) 1698 NM_001170800 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak1_22_65_0.894066684735057_6.49142746172598_4.25069040775215-3 chr7 106239801 106240367 + 4.25069040775215 NA Intergenic Intergenic -24744 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak1_22_65_0.894066684735057_6.49142746172598_4.25069040775215-2 chr7 66260889 66261428 + 4.25069040775215 NA intron (NM_146191, intron 33 of 33) intron (NM_146191, intron 33 of 33) 120566 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_22_65_0.894066684735057_6.49142746172598_4.25069040775215-4 chr9 99091100 99091665 + 4.25069040775215 NA intron (NM_029094, intron 6 of 23) intron (NM_029094, intron 6 of 23) 48829 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak1_222_1730_0.201093864587765_10.8579369416605_4.25025797314777 chr2 180701069 180703211 + 4.25025797314777 NA promoter-TSS (NM_175551) promoter-TSS (NM_175551) -38 NM_175551 23856 Mm.253836 NM_011805 ENSMUSG00000038914 Dido1 6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido death inducer-obliterator 1 protein-coding common_peak2_301_2572_0.165896954438107_11.4121842189529_4.25017962935095 chr5 113623708 113631007 + 4.25017962935095 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 23033 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak2_118_747_0.300177910352007_9.69698341506364_4.24966649931656 chr14 56667478 56669133 + 4.24966649931656 NA promoter-TSS (NM_023773) promoter-TSS (NM_023773) 57 NM_023773 75339 Mm.152466 NM_023773 ENSMUSG00000079184 Mphosph8 1500035L22Rik|4930548G07Rik|AU040635 M-phase phosphoprotein 8 protein-coding common_peak2_326_2851_0.158118485239033_11.5568175090634_4.24646659007517 chr1 180328795 180333095 + 4.24646659007517 NA promoter-TSS (NR_003623) promoter-TSS (NR_003623) -396 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_42_175_0.586295551616653_7.75257939444562_4.24636891959732-2 chr6 146633638 146634576 + 4.24636891959732 NA intron (NM_026281, intron 1 of 11) B1F1|SINE|Alu 485 NM_026281 67623 Mm.278037 NM_026281 ENSMUSG00000040234 Tm7sf3 2010003B14Rik|NARP1 transmembrane 7 superfamily member 3 protein-coding common_peak1_42_175_0.586295551616653_7.75257939444562_4.24636891959732 chr7 128057992 128058979 + 4.24636891959732 NA Intergenic RLTR26_Mus|LTR|ERVK -4155 NM_001082960 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak2_42_175_0.586295551616653_7.75257939444562_4.24636891959732 chr12 12287114 12288299 + 4.24636891959732 NA intron (NM_029758, intron 2 of 12) intron (NM_029758, intron 2 of 12) 25567 NM_001146119 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding common_peak1_39_345_-0.516881688819593_8.17618738322693_4.24597838561512 chr15 66475924 66476722 + 4.24597838561512 NA intron (NM_019457, intron 3 of 11) intron (NM_019457, intron 3 of 11) 24587 NM_019457 54562 Mm.244890 NM_019457 ENSMUSG00000022375 Lrrc6 LRTP leucine rich repeat containing 6 (testis) protein-coding unique_peak2_35_309_-0.544826732215215_8.00371103916663_4.24557655671534 chr17 37049950 37051335 + 4.24557655671534 NA intron (NM_019439, intron 5 of 22) CpG 4676 NM_019439 54393 Mm.32191 NM_019439 ENSMUSG00000024462 Gabbr1 GABAB1|GABAbR1|bM573K1.1 gamma-aminobutyric acid (GABA) B receptor, 1 protein-coding common_peak2_116_730_0.303350369808708_9.66540278085679_4.24467566012733 chr1 91458472 91460263 + 4.24467566012733 NA promoter-TSS (NM_011066) promoter-TSS (NM_011066) -39 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding common_peak2_67_603_-0.381643855978195_9.04758281133598_4.24428204119843 chr3 103171189 103172673 + 4.24428204119843 NA intron (NM_026602, intron 1 of 6) CpG 220 NM_026602 68183 Mm.104919 NM_026602 ENSMUSG00000005687 Bcas2 6430539P16Rik|AI132645|C76366|C80030 breast carcinoma amplified sequence 2 protein-coding common_peak2_544_5499_0.114631919108573_12.4825318628537_4.24416459717574 chr9 21286232 21292360 + 4.24416459717574 NA exon (NM_009878, exon 2 of 2) exon (NM_009878, exon 2 of 2) -1327 NM_145416 215194 Mm.290690 NM_145416 ENSMUSG00000035047 Kri1 - KRI1 homolog protein-coding common_peak2_205_1558_0.211754982265312_10.7122827038304_4.24390019907652 chr11 87441897 87444369 + 4.24390019907652 NA intron (NM_031386, intron 2 of 30) CpG 15542 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_50_444_-0.449990748726304_8.57266615149061_4.24324462715789 chr11 116436636 116437445 + 4.24324462715789 NA intron (NR_003376, intron 3 of 3) intron (NR_003376, intron 3 of 3) 2827 NR_003376 664849 Mm.258466 NR_003376 Gm7367 EG664849 1110014K08Rik pseudogene pseudo common_peak1_577_5927_0.11055108244912_12.5886052735304_4.24311352372721 chr2 128427213 128430985 + 4.24311352372721 NA non-coding (NR_028591, exon 1 of 2) non-coding (NR_028591, exon 1 of 2) 252 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA unique_peak2_10_102_-1.05331509567562_6.15984297934541_4.24308170550019-3 chr9 56208489 56208979 + 4.24308170550019 NA intron (NM_172924, intron 6 of 6) B3A|SINE|B2 -47664 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding unique_peak2_10_102_-1.05331509567562_6.15984297934541_4.24308170550019-2 chr7 135712757 135713688 + 4.24308170550019 NA intron (NM_001081117, intron 3 of 13) MLT1B|LTR|ERVL-MaLR 3157 NM_001081117 17345 Mm.4078 NM_001081117 ENSMUSG00000031004 Mki67 D630048A14Rik|Ki-67|Ki67 antigen identified by monoclonal antibody Ki 67 protein-coding unique_peak2_10_102_-1.05331509567562_6.15984297934541_4.24308170550019 chr18 74207771 74208561 + 4.24308170550019 NA promoter-TSS (NM_025581) promoter-TSS (NM_025581) -348 NM_025581 66468 Mm.283406 NM_025581 ENSMUSG00000036223 Ska1 2810433K01Rik|AV117428 spindle and kinetochore associated complex subunit 1 protein-coding common_peak1_86_787_-0.329253988790523_9.45742482506111_4.24084135429131 chr10 80702197 80703254 + 4.24084135429131 NA promoter-TSS (NM_027829) promoter-TSS (NM_027829) 32 NM_027829 71564 Mm.35802 NM_027829 ENSMUSG00000055862 Izumo4 9030607L17Rik|AI550407 IZUMO family member 4 protein-coding common_peak1_291_2462_0.169342736259379_11.3508722806286_4.24051208534393 chr14 21830581 21832171 + 4.24051208534393 NA promoter-TSS (NM_011695) promoter-TSS (NM_011695) -185 NM_011695 22334 Mm.262327 NM_011695 ENSMUSG00000021771 Vdac2 Vdac6|mVDAC2|mVDAC6 voltage-dependent anion channel 2 protein-coding common_peak1_115_722_0.304036099934164_9.6498698869182_4.24005185834293 chr17 52167226 52169527 + 4.24005185834293 NA Intergenic Intergenic 285649 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA common_peak1_129_843_0.282427642812067_9.86231301011322_4.23880864711789 chr4 53158633 53159983 + 4.23880864711789 NA intron (NM_013454, intron 1 of 49) intron (NM_013454, intron 1 of 49) 587 NM_013454 11303 Mm.277376 NM_013454 ENSMUSG00000015243 Abca1 ABC-1|Abc1 ATP-binding cassette, sub-family A (ABC1), member 1 protein-coding common_peak2_320_3456_-0.152199952753342_11.6792049118857_4.23857415606947 chr6 117905253 117909353 + 4.23857415606947 NA promoter-TSS (NM_001166429) intron (NM_133834, intron 1 of 3) -501 NM_001166428 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_68_612_-0.377147943443987_9.07116929196879_4.23829709642499 chr4 150544385 150545675 + 4.23829709642499 NA intron (NM_001085492, intron 11 of 22) intron (NM_001085492, intron 11 of 22) 107144 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak1_21_60_0.929060405131064_6.39526754012842_4.23828147057548-2 chr11 106157306 106157864 + 4.23828147057548 NA 3' UTR (NM_172397, exon 5 of 5) 3' UTR (NM_172397, exon 5 of 5) 2557 NM_172397 67803 Mm.21687 NM_172397 ENSMUSG00000040699 Limd2 0610025L06Rik|AI413966 LIM domain containing 2 protein-coding common_peak1_21_60_0.929060405131064_6.39526754012842_4.23828147057548 chr1 80643311 80643915 + 4.23828147057548 NA intron (NM_001285927, intron 2 of 55) intron (NM_001285927, intron 2 of 55) 21739 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak2_246_1979_0.188084403504751_11.0453269167193_4.23807627580221 chr11 29692685 29694860 + 4.23807627580221 NA promoter-TSS (NM_194051) promoter-TSS (NM_194051) -2 NM_194051 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding unique_peak2_5_63_-1.43944915428062_5.28027542285969_4.23598905726475 chr17 34195471 34195975 + 4.23598905726475 NA intron (NM_013683, intron 10 of 10) B3|SINE|B2 -2472 NM_010724 16913 Mm.180191 NM_010724 ENSMUSG00000024338 Psmb8 Lmp-7|Lmp7 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) protein-coding unique_peak2_11_109_-0.99419655661892_6.2842614352152_4.23499440244582 chr1 60748661 60749675 + 4.23499440244582 NA intron (NM_007642, intron 1 of 3) intron (NM_007642, intron 1 of 3) 2780 NM_007642 12487 Mm.255003 NM_007642 ENSMUSG00000026012 Cd28 - CD28 antigen protein-coding unique_peak2_11_109_-0.99419655661892_6.2842614352152_4.23499440244582-2 chr9 110994776 110995254 + 4.23499440244582 NA Intergenic RMER17C2|LTR|ERVK -5302 NM_153100 235636 Mm.441138 NM_153100 ENSMUSG00000066319 Rtp3 Tmem7 receptor transporter protein 3 protein-coding common_peak1_42_371_-0.49343164085408_8.29244299068099_4.23491884270505 chr1 4857683 4858392 + 4.23491884270505 NA promoter-TSS (NM_001159751) promoter-TSS (NM_001159751) -291 NM_001159751 21399 Mm.207263 NM_011541 ENSMUSG00000033813 Tcea1 S-II transcription elongation factor A (SII) 1 protein-coding unique_peak2_8_86_-1.16487044516242_5.86050827326752_4.2344143086348 chr15 41438741 41439420 + 4.2344143086348 NA Intergenic Intergenic -8402 NM_001130166 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak2_8_86_-1.16487044516242_5.86050827326752_4.2344143086348-2 chrX 75130299 75131062 + 4.2344143086348 NA intron (NM_008621, intron 1 of 11) intron (NM_008621, intron 1 of 11) 336 NM_008621 17524 Mm.391267 NM_008621 ENSMUSG00000031402 Mpp1 55kDa|C130070C03Rik|p55 membrane protein, palmitoylated protein-coding common_peak2_58_518_-0.414064323316056_8.81255856669985_4.23232788977861 chr11 69999790 70001339 + 4.23232788977861 NA promoter-TSS (NM_007888) promoter-TSS (NM_007888) -62 NM_007888 13543 Mm.5114 NM_007888 ENSMUSG00000020888 Dvl2 - dishevelled segment polarity protein 2 protein-coding common_peak1_113_1061_-0.281457020067622_9.91183954077034_4.23141034546787 chr4 119108552 119109909 + 4.23141034546787 NA intron (NM_011400, intron 1 of 9) CpG 485 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak1_89_817_-0.323166084190762_9.51437399084637_4.2311796262381 chr5 122354378 122355171 + 4.2311796262381 NA promoter-TSS (NM_144912) promoter-TSS (NM_144912) 361 NM_019780 56433 Mm.216528 NM_019780 ENSMUSG00000029462 Vps29 2010015D08Rik|AW049835|PEP11 VPS29 retromer complex component protein-coding common_peak2_48_213_0.535409250509538_8.00917161165592_4.23031507141736 chr11 83753245 83754480 + 4.23031507141736 NA exon (NM_145432, exon 1 of 20) exon (NM_145432, exon 1 of 20) 225 NM_145432 217026 Mm.117874 NM_145432 ENSMUSG00000000976 Heatr6 2700008B19Rik|BB135312|BB249351 HEAT repeat containing 6 protein-coding common_peak2_110_680_0.312407179352624_9.56771457768838_4.22997284777038 chr2 30706912 30709291 + 4.22997284777038 NA Intergenic Intergenic -13109 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak2_313_2706_0.161608773377043_11.4832835589035_4.22962136771391 chr17 47922128 47925913 + 4.22962136771391 NA intron (NM_001110824, intron 1 of 16) CpG 612 NM_028767 74123 Mm.240062 NM_028767 ENSMUSG00000023991 Foxp4 1200010K03Rik|2310007G05Rik|mFKHLA forkhead box P4 protein-coding common_peak1_108_663_0.316702804182711_9.53339083343828_4.22870933302783 chr7 122132382 122133468 + 4.22870933302783 NA promoter-TSS (NM_001081238) promoter-TSS (NM_001081238) 21 NM_001289844 233826 Mm.38348 NM_172744 ENSMUSG00000044702 Palb2 BC066140 partner and localizer of BRCA2 protein-coding common_peak2_51_233_0.511668836243883_8.12619913770535_4.22869265898826 chr7 19577082 19578355 + 4.22869265898826 NA intron (NM_022409, intron 1 of 2) intron (NM_022409, intron 1 of 2) 431 NM_022409 63872 Mm.23310 NM_022409 ENSMUSG00000011267 Zfp296 2210018A16Rik|Znf296 zinc finger protein 296 protein-coding common_peak1_106_646_0.321348517363266_9.49829616067414_4.22858273731301 chr18 53176266 53177352 + 4.22858273731301 NA intron (NM_026386, intron 1 of 14) CpG 444 NM_026386 67804 Mm.252171 NM_026386 ENSMUSG00000034484 Snx2 0610030A03Rik sorting nexin 2 protein-coding common_peak1_40_163_0.603891260447342_7.65949763484175_4.22795214825611 chr18 60744633 60745445 + 4.22795214825611 NA Intergenic Intergenic -29557 NM_020600 20044 Mm.43778 NM_020600 ENSMUSG00000024608 Rps14 2600014J02Rik|AL023078 ribosomal protein S14 protein-coding common_peak1_126_817_0.286253661232296_9.8190838635579_4.22709020715209 chr3 60494687 60496791 + 4.22709020715209 NA intron (NM_001253713, intron 2 of 9) MTE2a|LTR|ERVL-MaLR -5440 NM_001253711 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_164_1161_0.243031181134672_10.3039099439719_4.22702009885339 chr5 122778522 122780515 + 4.22702009885339 NA promoter-TSS (NM_001199676) promoter-TSS (NM_001199676) -108 NM_145358 207565 Mm.289237 NM_145358 ENSMUSG00000029471 Camkk2 6330570N16Rik|AW061083|mKIAA0787 calcium/calmodulin-dependent protein kinase kinase 2, beta protein-coding common_peak1_91_837_-0.319121007233129_9.55124593008279_4.22659046377568 chr19 4192115 4192952 + 4.22659046377568 NA intron (NM_031868, intron 1 of 6) CpG 359 NM_031868 19045 Mm.1970 NM_031868 ENSMUSG00000040385 Ppp1ca Ppp1c|dism2 protein phosphatase 1, catalytic subunit, alpha isoform protein-coding common_peak2_107_655_0.317880184594223_9.5164920969152_4.22582140727306 chr11 75453933 75455981 + 4.22582140727306 NA promoter-TSS (NM_138950) promoter-TSS (NM_138950) -240 NM_138950 192652 Mm.340378 NM_138950 ENSMUSG00000045374 Wdr81 BC054822|Gm883|mFLJ00182|nur5 WD repeat domain 81 protein-coding common_peak1_107_655_0.317880184594223_9.5164920969152_4.22582140727306 chr8 46755062 46756959 + 4.22582140727306 NA intron (NM_008391, intron 1 of 8) A-rich|Low_complexity|Low_complexity 16265 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_21_190_-0.717631085341798_7.21861328536485_4.2257630968388 chr12 21479195 21479704 + 4.2257630968388 NA Intergenic ORR1A3|LTR|ERVL-MaLR -62013 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_45_398_-0.47517182094248_8.40265902575111_4.22410260116312 chrX 167012014 167012963 + 4.22410260116312 NA Intergenic Intergenic 57882 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak2_96_565_0.340680120531527_9.31499830309765_4.22364378433539 chr10 59322790 59324362 + 4.22364378433539 NA intron (NM_001316370, intron 1 of 13) CpG 280 NM_001316370 18451 Mm.2212 NM_011030 ENSMUSG00000019916 P4ha1 AL022634|P4ha procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide protein-coding common_peak1_51_453_-0.444514931463626_8.6042910215591_4.22332764350888 chr7 30625549 30626180 + 4.22332764350888 NA intron (NM_025628, intron 1 of 3) intron (NM_025628, intron 1 of 3) 287 NM_025628 110323 Mm.400 NM_025628 ENSMUSG00000036751 Cox6b1 2010000G05Rik|Cox6b cytochrome c oxidase, subunit VIb polypeptide 1 protein-coding common_peak2_98_581_0.336579120905881_9.35316490336122_4.2232811453634 chr17 86300164 86301770 + 4.2232811453634 NA intron (NM_011104, intron 1 of 14) intron (NM_011104, intron 1 of 14) -13789 NR_045435 72104 Mm.443401 NR_045435 ENSMUSG00000100738 2010106C02Rik - RIKEN cDNA 2010106C02 gene ncRNA common_peak1_64_322_0.441524165638972_8.55615243751341_4.22264796589675 chr7 101320827 101322134 + 4.22264796589675 NA intron (NM_019990, intron 1 of 6) CpG 161 NM_019990 56018 Mm.28896 NM_019990 ENSMUSG00000030688 Stard10 AV048538|CGI-52|NY-C0-28|PC-TP2|PCTP2|Pctpl|Sdccag28|SdccagG28|TISP-81 START domain containing 10 protein-coding common_peak2_531_6247_-0.112053803106907_12.5531518365885_4.22243255861805 chr5 96159518 96165665 + 4.22243255861805 NA promoter-TSS (NM_178854) promoter-TSS (NM_178854) -601 NM_144910 231464 Mm.28374 NM_144910 ENSMUSG00000034724 Cnot6l 4932442K20Rik CCR4-NOT transcription complex, subunit 6-like protein-coding common_peak1_94_867_-0.313081442169267_9.60501051135985_4.22221397103005 chr15 98662127 98663059 + 4.22221397103005 NA intron (NM_001080981, intron 1 of 16) intron (NM_001080981, intron 1 of 16) 296 NM_001080981 74351 Mm.45725 NM_001080981 ENSMUSG00000003360 Ddx23 3110082M05Rik|4921506D17Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 protein-coding common_peak1_237_2443_-0.181343888392732_11.1643566256224_4.22074645612291 chr17 87367027 87368780 + 4.22074645612291 NA intron (NM_028639, intron 18 of 19) intron (NM_028639, intron 18 of 19) 59838 NM_029298 75467 Mm.50108 NM_029298 ENSMUSG00000036557 Stpg4 1700011E24Rik|GSE sperm tail PG rich repeat containing 4 protein-coding common_peak2_135_1292_-0.253133365277014_10.2099398771717_4.2203982988094 chr9 45276808 45281629 + 4.2203982988094 NA Intergenic RLTR20A4|LTR|ERVK -10072 NM_008348 16154 Mm.379327 NM_008348 ENSMUSG00000032089 Il10ra AW553859|CDw210|CDw210a|IL-10R1|IL-10RA|Il10r|mIL-10R interleukin 10 receptor, alpha protein-coding common_peak1_59_527_-0.409125375574394_8.83983143157126_4.22033010358136 chr11 33700952 33701847 + 4.22033010358136 NA intron (NM_001190885, intron 1 of 8) LTR33|LTR|ERVL -122442 NM_146017 216643 Mm.99989 NM_146017 ENSMUSG00000020159 Gabrp - gamma-aminobutyric acid (GABA) A receptor, pi protein-coding common_peak1_103_958_-0.296741138004487_9.75701643601589_4.219834508027 chr16 19982267 19983202 + 4.219834508027 NA exon (NM_183390, exon 1 of 7) exon (NM_183390, exon 1 of 7) 315 NM_183390 239743 Mm.86699 NM_183390 ENSMUSG00000043008 Klhl6 - kelch-like 6 protein-coding common_peak1_79_432_0.386135635276764_8.95129103236511_4.21976414012451 chr2 31151918 31152872 + 4.21976414012451 NA promoter-TSS (NM_178760) promoter-TSS (NM_178760) 79 NM_178760 277463 Mm.236074 NM_178760 ENSMUSG00000000194 Gpr107 9930033D15Rik|AI790205|C530034M11|mKIAA1624 G protein-coupled receptor 107 protein-coding common_peak1_25_80_0.815571241756308_6.74763562376278_4.21898688585123 chr14 66217744 66218289 + 4.21898688585123 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -4464 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_25_80_0.815571241756308_6.74763562376278_4.21898688585123-2 chr15 76924915 76925411 + 4.21898688585123 NA intron (NM_001168276, intron 1 of 5) CpG 285 NM_172817 239546 Mm.183650 NM_172817 ENSMUSG00000054967 Zfp647 6030449J21|Es492|Znf250 zinc finger protein 647 protein-coding common_peak2_38_151_0.625015936164275_7.56043548152572_4.21722714076588 chr6 67339386 67340421 + 4.21722714076588 NA promoter-TSS (NM_001311141) promoter-TSS (NM_001311141) -209 NM_001311141 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak1_38_151_0.625015936164275_7.56043548152572_4.21722714076588 chr7 116149774 116150548 + 4.21722714076588 NA intron (NM_001305189, intron 11 of 20) RSINE1|SINE|B4 39680 NM_172743 233765 Mm.3741 NM_172743 ENSMUSG00000045659 Plekha7 A430081P20Rik|AI414265 pleckstrin homology domain containing, family A member 7 protein-coding common_peak2_214_2174_-0.192966928491181_10.9903162213779_4.21549525457506 chr13 37536173 37539086 + 4.21549525457506 NA Intergenic MER31B|LTR|ERV1 192284 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding common_peak1_188_1391_0.222800180256337_10.5543435859769_4.21495001182365 chr7 31160150 31162370 + 4.21495001182365 NA Intergenic Intergenic -1098 NR_046062 100038516 Mm.387223 NR_046062 ENSMUSG00000100985 Gm10640 EG668322|ENSMUSG00000074193 predicted gene 10640 ncRNA unique_peak2_38_335_-0.519373973170899_8.13263043619331_4.21473894099039 chr3 35999871 36001309 + 4.21473894099039 NA promoter-TSS (NM_023644) promoter-TSS (NM_023644) 88 NM_023644 72039 Mm.249016 NM_023644 ENSMUSG00000027709 Mccc1 1810045E08Rik|2310058B18Rik|MCCalpha|Mcca|R75106 methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) protein-coding common_peak2_38_335_-0.519373973170899_8.13263043619331_4.21473894099039 chr9 94608675 94611386 + 4.21473894099039 NA Intergenic MLT1B|LTR|ERVL-MaLR -59862 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak2_52_461_-0.436007275972946_8.63374540342959_4.21461299534708 chr12 69356466 69357844 + 4.21461299534708 NA promoter-TSS (NM_025441) promoter-TSS (NM_025441) 21 NM_025441 66244 Mm.46705 NM_025441 ENSMUSG00000020982 Nemf 1500011I12Rik|4933405E14Rik|Sdccag1 nuclear export mediator factor protein-coding common_peak2_133_1270_-0.254592303668879_10.1844521631705_4.21425151876565 chr7 45394691 45396572 + 4.21425151876565 NA non-coding (NR_126539, exon 1 of 10) non-coding (NR_126539, exon 1 of 10) 111 NM_009224 20637 Mm.216386 NM_009224 ENSMUSG00000063511 Snrnp70 2700022N21Rik|3200002N22Rik|AI325098|R74807|Rnu1p70|Rnulp70|Snrp70|Srnp70|U1-70|U1-70K small nuclear ribonucleoprotein 70 (U1) protein-coding common_peak2_236_1875_0.192789494751226_10.969838859891_4.2136313113756 chr2 93450252 93455947 + 4.2136313113756 NA promoter-TSS (NM_001271462) promoter-TSS (NM_001271462) 280 NR_040533 100038525 Mm.440596 NR_040532 ENSMUSG00000075025 Gm10804 ENSMUSG00000075025 predicted gene 10804 ncRNA common_peak2_263_2160_0.179673524360441_11.1673201190397_4.21222901145027 chr17 25013474 25017646 + 4.21222901145027 NA promoter-TSS (NM_020608) promoter-TSS (NM_020608) -330 NM_020608 57354 Mm.328854 NM_020608 ENSMUSG00000038002 Cramp1l 5830477H08Rik|AI256853|AI790734|Cramp1|Tce4|mKIAA1426 Crm, cramped-like (Drosophila) protein-coding common_peak1_81_737_-0.339421429808613_9.35776629115609_4.21134105702284 chr7 4740028 4741026 + 4.21134105702284 NA intron (NM_146177, intron 1 of 8) intron (NM_146177, intron 1 of 8) 400 NM_001115018 232811 Mm.247844 NM_146177 ENSMUSG00000059851 Kmt5c BC024816|Suv4-20h2|Suv420h2 lysine methyltransferase 5C protein-coding unique_peak2_80_728_-0.343432921334058_9.33805854365991_4.21119550876228 chr16 78557249 78561479 + 4.21119550876228 NA promoter-TSS (NR_040569) promoter-TSS (NR_040569) -952 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak2_437_4158_0.131044884078912_12.0875434116858_4.21102740036412 chr11 70432002 70439717 + 4.21102740036412 NA intron (NM_145429, intron 2 of 14) intron (NM_145429, intron 2 of 14) -2396 NR_106064 102465670 NR_106064 ENSMUSG00000099109 Mir7115 Gm27902|mmu-mir-7115 microRNA 7115 ncRNA common_peak1_30_106_0.72521521833316_7.10407459556773_4.2106473793019-2 chr9 44022465 44023132 + 4.2106473793019 NA Intergenic RMER17A2|LTR|ERVK -20586 NM_009382 21838 Mm.3951 NM_009382 ENSMUSG00000032011 Thy1 CD90|T25|Thy-1|Thy-1.2|Thy1.1|Thy1.2 thymus cell antigen 1, theta protein-coding unique_peak2_30_106_0.72521521833316_7.10407459556773_4.2106473793019 chr18 20967832 20968736 + 4.2106473793019 NA intron (NM_026301, intron 1 of 5) URR1B|DNA|hAT-Charlie 23659 NM_026301 67664 Mm.45980 NM_026301 ENSMUSG00000033107 Rnf125 4930553F04Rik ring finger protein 125 protein-coding common_peak1_30_106_0.72521521833316_7.10407459556773_4.2106473793019 chr17 71074455 71075048 + 4.2106473793019 NA intron (NM_010867, intron 14 of 37) intron (NM_010867, intron 14 of 37) 55194 NM_001083934 17929 Mm.4103 NM_010867 ENSMUSG00000024049 Myom1 D430047A17Rik myomesin 1 protein-coding common_peak1_30_266_-0.594013726953248_7.76368906821093_4.21025084789149 chr1 91249656 91250135 + 4.21025084789149 NA promoter-TSS (NM_026454) promoter-TSS (NM_026454) -424 NM_026454 67921 Mm.337238 NM_026454 ENSMUSG00000034343 Ube2f 2510010F15Rik|AI851109 ubiquitin-conjugating enzyme E2F (putative) protein-coding common_peak1_56_498_-0.418397285787087_8.75369736244372_4.20995016629683 chr8 83566735 83567391 + 4.20995016629683 NA intron (NM_025843, intron 1 of 2) CpG 305 NM_025843 66916 Mm.29683 NM_025843 ENSMUSG00000033938 Ndufb7 1110002H15Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 protein-coding common_peak2_60_536_-0.40425882693844_8.86664886451619_4.20923238790913 chr9 56041580 56042784 + 4.20923238790913 NA exon (NM_011992, exon 1 of 7) exon (NM_011992, exon 1 of 7) 337 NM_011992 26611 Mm.1782 NM_011992 ENSMUSG00000032320 Rcn2 AA408742|Tcbp49 reticulocalbin 2 protein-coding common_peak1_120_1133_-0.27063808030678_10.0118858847888_4.2085280254698 chr12 25142238 25144304 + 4.2085280254698 NA Intergenic Intergenic 14097 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_167_1190_0.239353879493454_10.3376346376108_4.20817329675254 chr9 44919891 44921683 + 4.20817329675254 NA promoter-TSS (NM_013795) promoter-TSS (NM_013795) -45 NM_013795 27425 Mm.14663 NM_013795 ENSMUSG00000038717 Atp5l 4933437C06Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G protein-coding common_peak2_72_380_0.408671838892307_8.77798310693947_4.20525679735044 chr5 150522000 150523296 + 4.20525679735044 NA promoter-TSS (NM_009765) promoter-TSS (NM_009765) 27 NM_001081001 12190 Mm.236256 NM_009765 ENSMUSG00000041147 Brca2 Fancd1|RAB163 breast cancer 2, early onset protein-coding common_peak1_34_300_-0.552173962236168_7.95753269564162_4.20494978837872 chr9 90248277 90248904 + 4.20494978837872 NA intron (NM_194334, intron 2 of 12) B1_Mur1|SINE|Alu 22179 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak2_82_455_0.376615855003607_9.02119794166654_4.20489559705895 chr1 178187532 178188576 + 4.20489559705895 NA intron (NM_024282, intron 1 of 4) CpG 637 NM_024282 78825 Mm.440132 NM_024282 ENSMUSG00000026502 Desi2 5830417C01Rik|DeSI-2|Fam152a|Pppde1 desumoylating isopeptidase 2 protein-coding common_peak1_43_380_-0.487237133613014_8.33002862068681_4.20366336305784 chr7 45466179 45466815 + 4.20366336305784 NA intron (NM_007527, intron 1 of 5) intron (NM_007527, intron 1 of 5) 401 NM_007527 12028 Mm.19904 NM_007527 ENSMUSG00000003873 Bax - BCL2-associated X protein protein-coding common_peak1_32_283_-0.572427171843802_7.86353353358278_4.20324838456486 chr7 44826391 44826966 + 4.20324838456486 NA intron (NM_001171024, intron 1 of 8) intron (NM_001171024, intron 1 of 8) -9610 NM_010215 14204 Mm.2565 NM_010215 ENSMUSG00000074141 Il4i1 Fig1|Fig1-ps|LAAO|LAO interleukin 4 induced 1 protein-coding common_peak1_160_1562_-0.228105149640685_10.4960494881793_4.20291964974617 chr11 117968026 117970054 + 4.20291964974617 NA 5' UTR (NM_007707, exon 1 of 2) 5' UTR (NM_007707, exon 1 of 2) 326 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak2_154_1497_-0.234034116846123_10.4318048500357_4.20222142268945 chr12 40036424 40038768 + 4.20222142268945 NA promoter-TSS (NM_007487) promoter-TSS (NM_007487) -220 NM_007487 11861 Mm.12723 NM_007487 ENSMUSG00000047446 Arl4a AI467555|Arl4 ADP-ribosylation factor-like 4A protein-coding common_peak2_154_1497_-0.234034116846123_10.4318048500357_4.20222142268945-2 chr18 67731587 67734802 + 4.20222142268945 NA Intergenic Intergenic -8573 NM_008977 19255 Mm.260433 NM_008977 ENSMUSG00000024539 Ptpn2 AI325124|Ptpt|TC-PTP protein tyrosine phosphatase, non-receptor type 2 protein-coding common_peak2_139_1334_-0.24795368967867_10.2586471817356_4.20171234712611 chr5 31596239 31599067 + 4.20171234712611 NA Intergenic L2c|LINE|L2 -16298 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_43_182_0.570710215596264_7.80105494608217_4.20102534057177-2 chr7 100582667 100583308 + 4.20102534057177 NA intron (NR_003559, intron 1 of 7) CpG 143 NM_198831 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e mitochondrial ribosomal protein L48 protein-coding common_peak1_43_182_0.570710215596264_7.80105494608217_4.20102534057177 chr6 148830868 148831637 + 4.20102534057177 NA 5' UTR (NM_001081113, exon 1 of 25) 5' UTR (NM_001081113, exon 1 of 25) 215 NM_001081113 320727 Mm.260105 NM_001081113 ENSMUSG00000040029 Ipo8 6230418K12Rik|Abcc10|C130009K11Rik|MRP7|OM-1|Om1|Ranbp8 importin 8 protein-coding common_peak1_27_240_-0.626324586212037_7.59972704312394_4.1997500061792 chr19 46620199 46620780 + 4.1997500061792 NA intron (NM_001177812, intron 2 of 4) intron (NM_001177812, intron 2 of 4) -2912 NM_001177813 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding unique_peak2_27_240_-0.626324586212037_7.59972704312394_4.1997500061792 chr1 170933713 170935129 + 4.1997500061792 NA Intergenic Intergenic -6838 NR_027666 98752 Mm.1850 NM_145141 ENSMUSG00000038421 Fcrla BB219290|FCRL|FCRL1|FREB|Fcrlm1|Fcrx|Freb1|mFREB|mFcrX Fc receptor-like A protein-coding common_peak1_36_318_-0.537628962553459_8.04859813248814_4.19911729030345 chr17 3102098 3102858 + 4.19911729030345 NA Intergenic Intergenic -12494 NM_134123 106583 Mm.124373 NM_134123 ENSMUSG00000046201 Scaf8 A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116 SR-related CTD-associated factor 8 protein-coding common_peak1_19_173_-0.751809268217952_7.06703886173975_4.19861213483713 chr6 72955359 72955851 + 4.19861213483713 NA Intergenic ORR1G|LTR|ERVL-MaLR 2627 NM_001039392 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding unique_peak2_19_173_-0.751809268217952_7.06703886173975_4.19861213483713 chrX 106026927 106027922 + 4.19861213483713 NA intron (NM_001109757, intron 1 of 22) intron (NM_001109757, intron 1 of 22) 200 NM_009726 11977 Mm.254297 NM_009726 ENSMUSG00000033792 Atp7a MNK ATPase, Cu++ transporting, alpha polypeptide protein-coding common_peak2_46_407_-0.469294254545478_8.43777821469876_4.197853504878 chr11 116671128 116672430 + 4.197853504878 NA promoter-TSS (NR_028569) promoter-TSS (NR_028569) 119 NR_027820 66293 Mm.432051 NM_025472 ENSMUSG00000020812 1810032O08Rik - RIKEN cDNA 1810032O08 gene ncRNA common_peak1_280_2343_0.172834632778812_11.2811741708117_4.1976874464551 chrX 13070397 13073202 + 4.1976874464551 NA intron (NM_009481, intron 1 of 44) CpG 301 NM_009481 22284 Mm.242646 NM_009481 ENSMUSG00000031010 Usp9x 5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl ubiquitin specific peptidase 9, X chromosome protein-coding common_peak2_57_507_-0.41340906107324_8.78198015623554_4.19640364829383 chr15 80263528 80265000 + 4.19640364829383 NA promoter-TSS (NM_175109) promoter-TSS (NM_175109) 42 NM_175109 66538 Mm.39485 NM_175109 ENSMUSG00000051518 Rps19bp1 2510038A11Rik|AI604923|S19BP ribosomal protein S19 binding protein 1 protein-coding common_peak1_57_507_-0.41340906107324_8.78198015623554_4.19640364829383 chr12 65036144 65036861 + 4.19640364829383 NA intron (NM_177806, intron 1 of 13) CpG 168 NM_177806 328110 Mm.283339 NM_177806 ENSMUSG00000035597 Prpf39 Srcs1 pre-mRNA processing factor 39 protein-coding unique_peak2_20_182_-0.738225194485545_7.14658724104127_4.19618408729668 chr7 35557304 35558539 + 4.19618408729668 NA Intergenic Intergenic -1993 NM_033080 110959 Mm.410206 NM_033080 ENSMUSG00000034875 Nudt19 D7Rp2|D7Rp2-r|D7Rp2-s|D7Rp2e|RP2-r|RP2-s nudix (nucleoside diphosphate linked moiety X)-type motif 19 protein-coding unique_peak2_24_215_-0.668872310027084_7.42045134714993_4.1953210144218 chr15 63968860 63970205 + 4.1953210144218 NA intron (NM_144846, intron 2 of 11) URR1B|DNA|hAT-Charlie 55071 NR_029414 74460 Mm.390801 NR_029414 ENSMUSG00000100127 Gsdmcl-ps 4933426G20Rik gasdermin C-like, pseudogene pseudo common_peak1_24_215_-0.668872310027084_7.42045134714993_4.1953210144218-4 chr7 143626469 143626936 + 4.1953210144218 NA intron (NM_175649, intron 1 of 7) PB1D10|SINE|Alu 1143 NM_175649 244237 Mm.247498 NM_175649 ENSMUSG00000045362 Tnfrsf26 Tnfrh3|Tnfrsf24 tumor necrosis factor receptor superfamily, member 26 protein-coding common_peak1_24_215_-0.668872310027084_7.42045134714993_4.1953210144218-3 chr6 136804972 136805424 + 4.1953210144218 NA promoter-TSS (NM_175652) promoter-TSS (NM_175652) -767 NM_175652 320332 Mm.246720 NM_175652 ENSMUSG00000096010 Hist4h4 B130044J01Rik histone cluster 4, H4 protein-coding common_peak1_24_215_-0.668872310027084_7.42045134714993_4.1953210144218-2 chr19 14598543 14598960 + 4.1953210144218 NA promoter-TSS (NM_011600) promoter-TSS (NM_011600) -568 NM_001302947 21888 Mm.103638 NM_011600 ENSMUSG00000024642 Tle4 5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4 transducin-like enhancer of split 4 protein-coding common_peak1_24_215_-0.668872310027084_7.42045134714993_4.1953210144218 chr14 57717491 57718172 + 4.1953210144218 NA intron (NM_015771, intron 2 of 7) PB1D10|SINE|Alu 16587 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_74_669_-0.357867577055469_9.2090834968174_4.19394444956056 chr1 92468524 92469778 + 4.19394444956056 NA intron (NM_024197, intron 3 of 9) intron (NM_024197, intron 3 of 9) 4607 NM_024197 67273 Mm.248778 NM_024197 ENSMUSG00000026260 Ndufa10 2900053E13Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 protein-coding common_peak1_27_90_0.778770109819229_6.89717969510831_4.19363577440744-3 chr3 123173769 123174417 + 4.19363577440744 NA intron (NM_080451, intron 1 of 4) intron (NM_080451, intron 1 of 4) 62056 NM_080451 118449 Mm.34359 NM_080451 ENSMUSG00000050315 Synpo2 1110069I04Rik|2310068J10Rik|9530006G20Rik|AI848603|Myo synaptopodin 2 protein-coding common_peak1_27_90_0.778770109819229_6.89717969510831_4.19363577440744-2 chr11 96823492 96824083 + 4.19363577440744 NA intron (NM_001130450, intron 2 of 4) intron (NM_001130450, intron 2 of 4) 226 NM_001130453 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak1_27_90_0.778770109819229_6.89717969510831_4.19363577440744 chr1 87659143 87659753 + 4.19363577440744 NA intron (NR_122078, intron 2 of 27) intron (NR_122078, intron 2 of 27) 39136 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_84_471_0.368998798490651_9.06714244860717_4.19292675917733 chr10 81406445 81407905 + 4.19292675917733 NA intron (NM_026756, intron 6 of 8) intron (NM_026756, intron 6 of 8) 9122 NR_106141 102465778 NR_106141 ENSMUSG00000105379 Mir1191b mmu-mir-1191b microRNA 1191b ncRNA common_peak1_46_201_0.544919604674223_7.93067128508891_4.19289856093692 chr16 32113122 32114182 + 4.19289856093692 NA Intergenic Intergenic 13850 NM_025892 66994 Mm.22990 NM_025892 ENSMUSG00000035790 Cep19 1500031L02Rik|AI428934|AL022620 centrosomal protein 19 protein-coding common_peak1_46_201_0.544919604674223_7.93067128508891_4.19289856093692-3 chr6 91971993 91973067 + 4.19289856093692 NA Intergenic Intergenic -14580 NM_172731 232237 Mm.295740 NM_172731 ENSMUSG00000034037 Fgd5 C330025N11Rik|ZFYVE23|mFLJ00274 FYVE, RhoGEF and PH domain containing 5 protein-coding common_peak1_46_201_0.544919604674223_7.93067128508891_4.19289856093692-2 chr19 46479019 46479676 + 4.19289856093692 NA intron (NM_015752, intron 10 of 11) intron (NM_015752, intron 10 of 11) -22301 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak2_12_117_-0.953834115907265_6.40572599140821_4.19247457282723-2 chr7 128189269 128190162 + 4.19247457282723 NA intron (NM_001029872, intron 13 of 30) intron (NM_001029872, intron 13 of 30) 13613 NR_045183 70973 Mm.441564 NR_045183 ENSMUSG00000108354 4931431B13Rik 1700108I23Rik|AA536668 RIKEN cDNA 4931431B13 gene ncRNA unique_peak2_12_117_-0.953834115907265_6.40572599140821_4.19247457282723 chr4 57301086 57302028 + 4.19247457282723 NA intron (NM_011207, intron 1 of 25) intron (NM_011207, intron 1 of 25) 280 NM_011207 545622 Mm.246552 NM_011207 ENSMUSG00000038764 Ptpn3 9530011I20Rik|PTP-H1|PTPCL protein tyrosine phosphatase, non-receptor type 3 protein-coding common_peak1_12_117_-0.953834115907265_6.40572599140821_4.19247457282723 chrX 8892587 8892994 + 4.19247457282723 NA non-coding (NR_045448, exon 1 of 1) non-coding (NR_045448, exon 1 of 1) 437 NR_045448 102941 Mm.41588 NM_175327 ENSMUSG00000052364 B630019K06Rik AI843180 novel protein similar to F-box and leucine-rich repeat protein 17 (Fbxl17) pseudo common_peak1_19_51_0.990694509489685_6.19578697288593_4.18977144472923 chr11 53979804 53980278 + 4.18977144472923 NA promoter-TSS (NM_019723) promoter-TSS (NM_019723) -14 NM_019723 56517 Mm.154284 NM_019723 ENSMUSG00000063652 Slc22a21 Octn3|Slc22a9 solute carrier family 22 (organic cation transporter), member 21 protein-coding unique_peak1_19_51_0.990694509489685_6.19578697288593_4.18977144472923-2 chr9 83831277 83831844 + 4.18977144472923 NA Intergenic Intergenic -3129 NM_009445 22137 Mm.1904 NM_009445 ENSMUSG00000038379 Ttk AL022661|Esk1|Mps1|PYT|esk Ttk protein kinase protein-coding unique_peak1_19_51_0.990694509489685_6.19578697288593_4.18977144472923 chr13 101755588 101756073 + 4.18977144472923 NA intron (NM_001077495, intron 2 of 15) (CAG)n|Simple_repeat|Simple_repeat 12387 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_654_6953_0.101565496997564_12.8144101002264_4.18957531144877 chr4 129569238 129575471 + 4.18957531144877 NA intron (NM_001162433, intron 1 of 12) intron (NM_001162433, intron 1 of 12) 1287 NM_001162433 16818 Mm.293753 NM_010693 ENSMUSG00000000409 Lck Hck-3|Lsk|Lskt|p56|p56Lck lymphocyte protein tyrosine kinase protein-coding common_peak2_62_554_-0.394734801285686_8.91897656059463_4.18954768639503 chr17 36256960 36258350 + 4.18954768639503 NA exon (NM_026308, exon 2 of 5) exon (NM_026308, exon 2 of 5) 191 NM_026308 67676 Mm.27131 NM_026308 ENSMUSG00000024446 Rpp21 0610037N01Rik ribonuclease P 21 subunit protein-coding common_peak1_111_1039_-0.282578440637817_9.88107859270955_4.18875176795863-2 chr8 79294134 79295649 + 4.18875176795863 NA promoter-TSS (NR_045823) promoter-TSS (NR_045823) 65 NM_133823 109136 Mm.26510 NM_133823 ENSMUSG00000037022 Mmaa 2810018E08Rik|AI840684 methylmalonic aciduria (cobalamin deficiency) type A protein-coding common_peak1_111_1039_-0.282578440637817_9.88107859270955_4.18875176795863 chr2 26915770 26916980 + 4.18875176795863 NA promoter-TSS (NM_013678) promoter-TSS (NM_013678) -46 NM_013678 20931 Mm.389260 NM_013678 ENSMUSG00000014873 Surf2 Surf-2 surfeit gene 2 protein-coding common_peak2_333_2933_0.154705761200926_11.5960060362739_4.18727528375672 chr10 61256825 61261394 + 4.18727528375672 NA intron (NM_001081127, intron 2 of 21) URR1B|DNA|hAT-Charlie 14329 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak2_413_4649_-0.129672853296324_12.1181785742346_4.18704527777392 chr11 69918765 69922910 + 4.18704527777392 NA promoter-TSS (NM_001166590) promoter-TSS (NM_001166590) 110 NM_001166594 276770 Mm.18026 NM_181582 ENSMUSG00000078812 Eif5a AA410058|D19Wsu54e|Eif4d|Eif5a1|eIF-4D|eIF-5A|eIF-5A-1|eIF-5A1 eukaryotic translation initiation factor 5A protein-coding common_peak2_109_1018_-0.285035006593542_9.85042083286904_4.18688883553817 chr9 118415094 118417761 + 4.18688883553817 NA Intergenic Intergenic -13412 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak1_44_388_-0.477447707421561_8.36490249127541_4.18638812508769 chr17 35997568 35998546 + 4.18638812508769 NA intron (NR_015618, intron 1 of 1) MTEb|LTR|ERVL-MaLR 3553 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA common_peak1_24_75_0.838087678692799_6.66697135278998_4.18564730567791-2 chr6 119396504 119397037 + 4.18564730567791 NA intron (NM_197985, intron 1 of 7) B1F1|SINE|Alu 20713 NM_197985 68465 Mm.291826 NM_197985 ENSMUSG00000030168 Adipor2 1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2 adiponectin receptor 2 protein-coding common_peak1_24_75_0.838087678692799_6.66697135278998_4.18564730567791 chr15 34495431 34495874 + 4.18564730567791 NA promoter-TSS (NM_008287) promoter-TSS (NM_008287) 341 NM_152894 67724 Mm.248779 NM_026340 ENSMUSG00000022325 Pop1 4932434G09Rik processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) protein-coding unique_peak2_24_75_0.838087678692799_6.66697135278998_4.18564730567791 chr9 40191998 40192663 + 4.18564730567791 NA promoter-TSS (NM_030713) promoter-TSS (NM_030713) 14 NM_030713 80902 Mm.132196 NM_030713 ENSMUSG00000025602 Zfp202 C130037E22Rik|Znf202 zinc finger protein 202 protein-coding common_peak1_47_415_-0.460051938862641_8.47041374870977_4.18435918150344 chr5 31291250 31291937 + 4.18435918150344 NA promoter-TSS (NM_026298) promoter-TSS (NM_026298) -479 NM_026298 67661 Mm.293023 NM_026298 ENSMUSG00000038564 Ift172 4930553F24Rik|Slb|avc1|wim intraflagellar transport 172 protein-coding common_peak2_47_415_-0.460051938862641_8.47041374870977_4.18435918150344 chr6 122757955 122759965 + 4.18435918150344 NA Intergenic Intergenic -16215 NM_011401 20527 Mm.395108 NM_011401 ENSMUSG00000003153 Slc2a3 AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3 solute carrier family 2 (facilitated glucose transporter), member 3 protein-coding common_peak2_243_1949_0.188485664782711_11.0235012410283_4.18387383538534 chr11 21091066 21094020 + 4.18387383538534 NA intron (NM_023324, intron 1 of 6) intron (NM_023324, intron 1 of 6) 1219 NM_023324 67245 Mm.28957 NM_023324 ENSMUSG00000020134 Peli1 2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e pellino 1 protein-coding common_peak1_91_836_-0.31739838608412_9.55038461950828_4.18163985523271 chr16 91043604 91044532 + 4.18163985523271 NA exon (NM_026110, exon 1 of 18) exon (NM_026110, exon 1 of 18) 311 NM_026110 67367 Mm.347 NM_026110 ENSMUSG00000022974 Paxbp1 1810007M14Rik|C21orf66|Gcfc|Gcfc1|Pax3/7bp PAX3 and PAX7 binding protein 1 protein-coding common_peak1_126_818_0.284491052533037_9.81996516790753_4.18161168931219 chr11 86683147 86684687 + 4.18161168931219 NA promoter-TSS (NM_001098810) promoter-TSS (NM_001098810) -66 NM_175004 217057 Mm.24868 NM_175004 ENSMUSG00000072582 Ptrh2 A230072I16Rik|Bit1|CGI-147 peptidyl-tRNA hydrolase 2 protein-coding common_peak2_50_443_-0.446745089222649_8.57104332173878_4.18152969293279-2 chr7 34195751 34197144 + 4.18152969293279 NA intron (NM_026549, intron 1 of 6) CpG-12996 200 NM_026549 68079 Mm.38173 NM_026549 ENSMUSG00000002635 Pdcd2l 6030457N17Rik programmed cell death 2-like protein-coding common_peak2_50_443_-0.446745089222649_8.57104332173878_4.18152969293279 chr2 145933934 145935046 + 4.18152969293279 NA promoter-TSS (NM_175280) promoter-TSS (NM_175280) 210 NM_025820 66877 Mm.248755 NM_025820 ENSMUSG00000001767 Crnkl1 1200013P10Rik|5730590A01Rik|C80326|crn Crn, crooked neck-like 1 (Drosophila) protein-coding common_peak1_54_479_-0.425599577222602_8.69409080699722_4.18092250936313 chr1 36571122 36571738 + 4.18092250936313 NA intron (NM_027957, intron 3 of 5) intron (NM_027957, intron 3 of 5) -13049 NM_001126047 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding common_peak2_183_1818_-0.210632089998906_10.723613782652_4.18080576049266 chr11 116129861 116132062 + 4.18080576049266 NA TTS (NM_024177) TTS (NM_024177) 167 NM_178802 338364 Mm.439976 NM_178802 ENSMUSG00000054517 Trim65 4732463G12Rik tripartite motif-containing 65 protein-coding common_peak1_92_846_-0.315401438444608_9.56851744010989_4.18013413302865 chr9 56103615 56105211 + 4.18013413302865 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 14437 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak1_110_681_0.310290238340523_9.56877304819443_4.18013413302865 chr9 7867416 7869581 + 4.18013413302865 NA intron (NM_007464, intron 1 of 8) B2_Mm2|SINE|B2 4672 NM_007464 11796 Mm.2026 NM_007464 ENSMUSG00000032000 Birc3 AW107670|Api1|Api2|Birc2|C-IAP2|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF49|cIAP-1|cIAP-2|cIAP1|cIAP2 baculoviral IAP repeat-containing 3 protein-coding common_peak2_188_1392_0.221764133503813_10.5548616093532_4.18010387799612 chr12 78860665 78862962 + 4.18010387799612 NA promoter-TSS (NM_026114) promoter-TSS (NM_026114) -175 NM_023721 73834 Mm.311549 NM_023721 ENSMUSG00000021114 Atp6v1d 1110004P10Rik|Atp6m|VATD|Vma8 ATPase, H+ transporting, lysosomal V1 subunit D protein-coding common_peak1_307_3291_-0.154802457275848_11.6073473917837_4.1799717676948 chr8 123040484 123042483 + 4.1799717676948 NA intron (NR_037865, intron 1 of 13) CpG 801 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_89_510_0.355611467813366_9.17498521484431_4.17931307721246 chr3 63975935 63977038 + 4.17931307721246 NA intron (NM_001033300, intron 1 of 15) CpG 343 NM_001033300 229363 Mm.331051 NM_001033300 ENSMUSG00000027823 Gmps 670032|AA591640|AI047208|Gm9479 guanine monophosphate synthetase protein-coding common_peak1_93_856_-0.313407995500125_9.58644739636244_4.17894757028366 chr1 182357029 182358490 + 4.17894757028366 NA Intergenic Intergenic -16153 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak2_23_206_-0.67971148940723_7.35363121279571_4.17878821040324 chr14 54296758 54297670 + 4.17878821040324 NA Intergenic RLTR4_MM-int|LTR|ERV1 -14289 NM_010991 18348 Mm.436623 NM_010991 ENSMUSG00000048153 Olfr49 IC6|MOR1181 olfactory receptor 49 protein-coding unique_peak2_23_206_-0.67971148940723_7.35363121279571_4.17878821040324 chr4 152137888 152139305 + 4.17878821040324 NA intron (NM_207687, intron 4 of 15) CpG -2271 NM_207690 56226 Mm.264215 NM_019585 ENSMUSG00000028943 Espn je espin protein-coding common_peak1_18_165_-0.774675227950034_6.98770181737191_4.17765955297401 chr6 137734510 137735001 + 4.17765955297401 NA promoter-TSS (NM_011499) promoter-TSS (NM_011499) -327 NM_011499 20901 Mm.22584 NM_011499 ENSMUSG00000030224 Strap AW557906|C78091|C79202|Unrip serine/threonine kinase receptor associated protein protein-coding common_peak2_124_800_0.288462346605993_9.78988960571171_4.17708856645329 chr2 126932282 126934044 + 4.17708856645329 NA promoter-TSS (NM_023220) promoter-TSS (NM_023220) 72 NM_023220 66552 Mm.269928 NM_023220 ENSMUSG00000027366 Sppl2a 2010106G01Rik|C130089K23Rik signal peptide peptidase like 2A protein-coding common_peak2_90_518_0.352754314362166_9.19596788553896_4.17661067365974 chr4 127015280 127016641 + 4.17661067365974 NA Intergenic Intergenic -5341 NR_045010 71514 Mm.257276 NM_023603 ENSMUSG00000028820 Sfpq 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|OTTMUSG00000009329|PSF|REP1 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) protein-coding common_peak1_77_698_-0.349592884581218_9.27435220308483_4.17626919497257 chrX 48424763 48425870 + 4.17626919497257 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 37816 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak2_76_410_0.393726957091383_8.87985806222737_4.1761124115353 chr2 13270757 13272133 + 4.1761124115353 NA promoter-TSS (NM_009105) promoter-TSS (NM_009105) -30 NM_009105 20163 Mm.905 NM_009105 ENSMUSG00000026727 Rsu1 RsuI|rsp-1 Ras suppressor protein 1 protein-coding common_peak2_39_344_-0.512706012848399_8.17409954524133_4.17602728002658 chr2 80616538 80617862 + 4.17602728002658 NA promoter-TSS (NM_024438) promoter-TSS (NM_024438) -14 NM_024438 68082 Mm.306818 NM_024438 ENSMUSG00000027001 Dusp19 5930436K22Rik|C79103|SKRP1|TS-DSP1 dual specificity phosphatase 19 protein-coding common_peak1_78_707_-0.34550645896968_9.29485232059816_4.17551231290394 chr10 128673299 128674700 + 4.17551231290394 NA promoter-TSS (NM_173733) promoter-TSS (NM_173733) -81 NM_173733 211389 Mm.23352 NM_173733 ENSMUSG00000049858 Suox SO sulfite oxidase protein-coding common_peak1_318_2764_0.158980962518353_11.5125542463812_4.17494476380306 chr11 77685287 77687998 + 4.17494476380306 NA intron (NM_001024205, intron 1 of 3) intron (NM_001024205, intron 1 of 3) 503 NM_001024205 68564 Mm.428996 NM_001024205 ENSMUSG00000037857 Nufip2 1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321 nuclear fragile X mental retardation protein interacting protein 2 protein-coding common_peak2_91_526_0.350026274829009_9.21667228905172_4.17434969030598 chr2 151541902 151543391 + 4.17434969030598 NA non-coding (NR_126058, exon 1 of 4) non-coding (NR_126058, exon 1 of 4) 163 NM_001302078 14225 Mm.278458 NM_008019 ENSMUSG00000032966 Fkbp1a FKBP12|Fkbp|Fkbp1 FK506 binding protein 1a protein-coding common_peak2_47_207_0.53994806113736_7.97041374870977_4.17390486186177 chr4 132807651 132809049 + 4.17390486186177 NA Intergenic Intergenic -11986 NM_001033308 230787 Mm.290912 NM_001033308 ENSMUSG00000037731 Themis2 ICB-1 thymocyte selection associated family member 2 protein-coding common_peak1_26_231_-0.635773428287977_7.54009428098358_4.17378298210295 chr15 64077755 64078240 + 4.17378298210295 NA Intergenic MIR|SINE|MIR -17549 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_26_231_-0.635773428287977_7.54009428098358_4.17378298210295-2 chr8 126757970 126758514 + 4.17378298210295 NA Intergenic Intergenic -164806 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_161_1573_-0.227265431328252_10.5065871098434_4.17344137218656 chr8 129233429 129235220 + 4.17344137218656 NA promoter-TSS (NM_153780) promoter-TSS (NM_153780) -278 NM_153780 72139 Mm.426514 NM_153780 ENSMUSG00000071302 2610044O15Rik8 2610044O15Rik RIKEN cDNA 2610044O15 gene protein-coding unique_peak1_12_23_1.34384643273342_5.25688571708787_4.17294976630178 chr19 24967540 24967907 + 4.17294976630178 NA Intergenic MLT1A1|LTR|ERVL-MaLR -6107 NM_146097 226043 Mm.272127 NM_146097 ENSMUSG00000024878 Cbwd1 AV349248|BC018472 COBW domain containing 1 protein-coding common_peak2_69_358_0.420217991886839_8.69794902976647_4.17159622869756 chr2 128295277 128296674 + 4.17159622869756 NA Intergenic Intergenic 133376 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_63_315_0.445697137320778_8.52662931683749_4.17121391079809 chr17 72937642 72939652 + 4.17121391079809 NA intron (NM_029999, intron 2 of 2) intron (NM_029999, intron 2 of 2) 20342 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_93_542_0.344935010808014_9.25727589320837_4.17107852160352 chr5 113157265 113158305 + 4.17107852160352 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 5528 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak2_50_227_0.514780762962715_8.0902803956461_4.17042719133444 chr7 25154706 25156320 + 4.17042719133444 NA non-coding (NR_045847, exon 2 of 3) non-coding (NR_045847, exon 2 of 3) 444 NR_045848 434147 Mm.59171 NM_001033781 ENSMUSG00000074274 D930028M14Rik EG434147 RIKEN cDNA D930028M14 gene ncRNA common_peak1_182_1334_0.22602994062534_10.4956389968876_4.170071240048 chr3 32508671 32511450 + 4.170071240048 NA promoter-TSS (NM_144519) promoter-TSS (NM_144519) -490 NM_001161818 67778 Mm.285620 NM_144519 ENSMUSG00000027667 Zfp639 6230400O18Rik|ANC-2H01|ZASC1|Znf639 zinc finger protein 639 protein-coding common_peak1_306_2630_0.162795738734246_11.442793402533_4.16792042790495 chr2 103795982 103798097 + 4.16792042790495 NA promoter-TSS (NM_001111292) promoter-TSS (NM_001111292) 39 NM_001111290 53872 Mm.427589 NM_016739 ENSMUSG00000027184 Caprin1 AL022980|Caprin-1|Gpiap|Gpiap1|Mmgpip137|P137|rng105 cell cycle associated protein 1 protein-coding common_peak1_31_274_-0.580422234100498_7.81307669136177_4.16651273053621 chr11 108244490 108245115 + 4.16651273053621 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 99086 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_31_274_-0.580422234100498_7.81307669136177_4.16651273053621-2 chr2 148672565 148673177 + 4.16651273053621 NA intron (NM_019761, intron 1 of 1) CpG 230 NM_001110159 56488 Mm.34663 NM_019761 ENSMUSG00000036992 Nxt1 1110001N02Rik NTF2-related export protein 1 protein-coding common_peak1_139_1333_-0.246872614288339_10.2581066440404_4.16618286512109 chr18 73571416 73572508 + 4.16618286512109 NA promoter-TSS (NM_001039214) promoter-TSS (NM_001039214) -743 NM_001039214 240396 Mm.24131 NM_001039214 ENSMUSG00000037253 Mex3c A130001D14Rik|BC035207|BM-013|Rkhd2 mex3 RNA binding family member C protein-coding common_peak2_13_125_-0.917327484668347_6.51861618116574_4.16571665902927 chr5 23385567 23386304 + 4.16571665902927 NA Intergenic Intergenic 48418 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA unique_peak2_13_125_-0.917327484668347_6.51861618116574_4.16571665902927 chr4 42551903 42552645 + 4.16571665902927 NA Intergenic Intergenic -24037 NM_001085530 545611 Mm.425173 NM_001085530 ENSMUSG00000094066 Fam205a2 Fam205a|Gm13298|OTTMUSG00000011339 family with sequence similarity 205, member A2 protein-coding common_peak2_78_425_0.387389470887479_8.92840435566958_4.16564371405822 chr7 89940479 89941473 + 4.16564371405822 NA exon (NM_026304, exon 1 of 5) exon (NM_026304, exon 1 of 5) 228 NM_001291289 67669 Mm.28679 NM_026304 ENSMUSG00000062797 Hikeshi 0610007P06Rik|1110002N09Rik|l(7)6Rn|l7Rn6 heat shock protein nuclear import factor protein-coding common_peak2_78_425_0.387389470887479_8.92840435566958_4.16564371405822-2 chr7 99431766 99433560 + 4.16564371405822 NA intron (NM_201352, intron 4 of 17) (CTCG)n|Simple_repeat|Simple_repeat -33341 NM_028145 72184 Mm.153585 NM_028145 ENSMUSG00000035298 Klhl35 2810406K13Rik kelch-like 35 protein-coding common_peak2_78_425_0.387389470887479_8.92840435566958_4.16564371405822-3 chr8 125568539 125569906 + 4.16564371405822 NA Intergenic Intergenic -15416 NR_015535 75930 Mm.195663 NR_015535 ENSMUSG00000110629 4930567H12Rik 4930579P07Rik RIKEN cDNA 4930567H12 gene ncRNA common_peak1_64_573_-0.387992406342791_8.97091072350429_4.16522972739284 chr7 90456856 90457896 + 4.16522972739284 NA promoter-TSS (NM_025460) promoter-TSS (NM_025460) -168 NM_025460 66271 Mm.28963 NM_025460 ENSMUSG00000030615 Tmem126a 1810020E01Rik transmembrane protein 126A protein-coding common_peak1_81_736_-0.337465232843288_9.35678819267343_4.1635477277039 chr17 29503073 29504286 + 4.1635477277039 NA Intergenic MLT1J|LTR|ERVL-MaLR 12634 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_153_1485_-0.233884548579173_10.420276126249_4.16321338950838 chr19 40894197 40895640 + 4.16321338950838 NA TTS (NR_106167) TTS (NR_106167) 213 NM_028319 72672 Mm.313523 NM_028319 ENSMUSG00000049164 Zfp518a 2810401C22Rik|6330417C12Rik|AI426493|Zfp518|Znf518|Znf518a|mKIAA0335 zinc finger protein 518A protein-coding common_peak1_199_1501_0.213183028181181_10.6592606116049_4.16257542920222 chr18 24205167 24206981 + 4.16257542920222 NA promoter-TSS (NM_001160404) promoter-TSS (NM_001160404) 80 NM_001160404 14423 Mm.30249 NM_013814 ENSMUSG00000000420 Galnt1 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 protein-coding common_peak1_51_452_-0.441333684218947_8.60270039793676_4.16237785038592 chr19 24971650 24972444 + 4.16237785038592 NA Intergenic B2_Mm2|SINE|B2 -10431 NM_146097 226043 Mm.272127 NM_146097 ENSMUSG00000024878 Cbwd1 AV349248|BC018472 COBW domain containing 1 protein-coding common_peak2_51_452_-0.441333684218947_8.60270039793676_4.16237785038592 chr8 85082611 85083968 + 4.16237785038592 NA promoter-TSS (NM_010764) promoter-TSS (NM_010764) 20 NM_010764 17159 Mm.4219 NM_010764 ENSMUSG00000005142 Man2b1 AW107687|LAMAN mannosidase 2, alpha B1 protein-coding common_peak1_379_3466_0.142222291445089_11.8305832669254_4.16193585444828 chr7 66197435 66200139 + 4.16193585444828 NA Intergenic RSINE1|SINE|B4 89272 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_17_157_-0.799095386304436_6.90423305502489_4.16146420489881 chr10 111234272 111234568 + 4.16146420489881 NA intron (NM_001003717, intron 3 of 22) intron (NM_001003717, intron 3 of 22) -64259 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding common_peak1_17_157_-0.799095386304436_6.90423305502489_4.16146420489881-2 chr9 32537649 32538069 + 4.16146420489881 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 3593 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_39_158_0.604863583532777_7.61531474705074_4.16017003613473 chr4 141870257 141871143 + 4.16017003613473 NA intron (NM_025994, intron 1 of 3) Charlie19a|DNA|hAT-Charlie 4220 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_45_397_-0.471551505263784_8.40084886791176_4.15910900088029 chr8 123982729 123983520 + 4.15910900088029 NA promoter-TSS (NM_019552) promoter-TSS (NM_019552) -2 NM_019552 56199 Mm.274243 NM_019552 ENSMUSG00000031974 Abcb10 Abc-me|Abcb12 ATP-binding cassette, sub-family B (MDR/TAP), member 10 protein-coding common_peak1_82_746_-0.33545856362089_9.37723515097879_4.15850009689607 chr4 114908552 114909560 + 4.15850009689607 NA promoter-TSS (NM_008593) promoter-TSS (NM_008593) -158 NM_008593 17301 Mm.7997 NM_008593 ENSMUSG00000055210 Foxd2 AI426778|Mf2 forkhead box D2 protein-coding common_peak1_29_101_0.736231090626208_7.0405408872846_4.15825637999246 chr7 64058581 64059240 + 4.15825637999246 NA Intergenic Intergenic -94925 NM_001039104 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak2_29_101_0.736231090626208_7.0405408872846_4.15825637999246 chr8 121850234 121851143 + 4.15825637999246 NA Intergenic B4A|SINE|B4 -21119 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding unique_peak2_7_78_-1.23413979623829_5.68671085005796_4.15763316026371 chr18 82485054 82485689 + 4.15763316026371 NA intron (NM_010777, intron 1 of 6) intron (NM_010777, intron 1 of 6) 10248 NM_001025245 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_316_2742_0.159376051410574_11.5012269325536_4.15744443407516 chr8 83747545 83750459 + 4.15744443407516 NA Intergenic Intergenic -7691 NM_001163031 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak1_23_70_0.864028348587413_6.58176129379839_4.15717235686576 chr10 52416938 52417450 + 4.15717235686576 NA promoter-TSS (NM_030250) promoter-TSS (NM_030250) -353 NM_030250 52014 Mm.199964 NM_030250 ENSMUSG00000023068 Nus1 1600027K07Rik|AU019165|AW538011|BC003223|D10Ertd438e NUS1 dehydrodolichyl diphosphate synthase subunit protein-coding common_peak1_23_70_0.864028348587413_6.58176129379839_4.15717235686576-3 chr12 102358721 102359132 + 4.15717235686576 NA intron (NM_001161365, intron 5 of 9) ORR1C1|LTR|ERVL-MaLR 75285 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_23_70_0.864028348587413_6.58176129379839_4.15717235686576-4 chr19 57088876 57089391 + 4.15717235686576 NA intron (NM_001290813, intron 6 of 20) intron (NM_001290813, intron 6 of 20) 29891 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_23_70_0.864028348587413_6.58176129379839_4.15717235686576-5 chr8 12876350 12876882 + 4.15717235686576 NA Intergenic Intergenic -39277 NM_178076 17207 Mm.334413 NM_178076 ENSMUSG00000031442 Mcf2l C130040G20Rik|Dbs|Ost|mKIAA0362 mcf.2 transforming sequence-like protein-coding common_peak1_23_70_0.864028348587413_6.58176129379839_4.15717235686576-2 chr11 118201558 118202152 + 4.15717235686576 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 10887 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak2_23_70_0.864028348587413_6.58176129379839_4.15717235686576 chr5 118459196 118459772 + 4.15717235686576 NA Intergenic Intergenic -101235 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak2_421_4753_-0.127714537617116_12.1510689191339_4.15683790988004 chr13 17802953 17806539 + 4.15683790988004 NA 5' UTR (NM_001081058, exon 1 of 14) 5' UTR (NM_001081058, exon 1 of 14) 351 NM_001081058 69562 Mm.193924 NM_027118 ENSMUSG00000041297 Cdk13 2310015O17Rik|Cdc2l5 cyclin-dependent kinase 13 protein-coding common_peak1_130_853_0.278995002226383_9.87758976073368_4.15675348042394 chr13 113138193 113139814 + 4.15675348042394 NA intron (NR_131045, intron 2 of 2) intron (NR_131045, intron 2 of 2) 2927 NR_131045 76720 Mm.54263 NR_131045 1700084D21Rik - RIKEN cDNA 1700084D21 gene ncRNA common_peak2_478_4667_0.122826262001089_12.2500019767079_4.1564190086118 chr10 93159163 93164945 + 4.1564190086118 NA promoter-TSS (NR_035452) promoter-TSS (NR_035452) -731 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak1_137_1312_-0.249443569459736_10.233929416163_4.15537426557275 chr16 96081412 96082570 + 4.15537426557275 NA exon (NM_001103179, exon 3 of 41) exon (NM_001103179, exon 3 of 41) 437 NM_001103179 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding common_peak2_40_352_-0.502081108205755_8.2124838191683_4.15315468721063-2 chr15 81729107 81730171 + 4.15315468721063 NA intron (NM_011241, intron 1 of 16) CpG 280 NM_011241 19387 Mm.270975 NM_011241 ENSMUSG00000022391 Rangap1 C79654|Fug1|mKIAA1835 RAN GTPase activating protein 1 protein-coding common_peak1_40_352_-0.502081108205755_8.2124838191683_4.15315468721063 chr17 24528208 24528818 + 4.15315468721063 NA promoter-TSS (NM_001172114) promoter-TSS (NM_001172114) 262 NR_045289 75614 Mm.440235 NR_045289 ENSMUSG00000093565 Rab26os 2610019E17Rik RAB26, member RAS oncogene family, opposite strand ncRNA common_peak2_40_352_-0.502081108205755_8.2124838191683_4.15315468721063 chr11 75976223 75977384 + 4.15315468721063 NA Intergenic Intergenic -23109 NM_198637 74230 Mm.271247 NM_198637 ENSMUSG00000053783 1700016K19Rik Liat1 RIKEN cDNA 1700016K19 gene protein-coding common_peak1_35_134_0.654482076008192_7.40405663505493_4.15232381088022-3 chr9 63711574 63712390 + 4.15232381088022 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 46012 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_35_134_0.654482076008192_7.40405663505493_4.15232381088022 chr15 76576326 76576835 + 4.15232381088022 NA intron (NR_073123, intron 1 of 14) intron (NR_073123, intron 1 of 14) 221 NR_073123 268822 Mm.181624 NM_172960 ENSMUSG00000022550 Adck5 A230108P17 aarF domain containing kinase 5 protein-coding common_peak2_35_134_0.654482076008192_7.40405663505493_4.15232381088022 chr11 46395956 46396903 + 4.15232381088022 NA intron (NR_105955, intron 2 of 4) intron (NR_105955, intron 2 of 4) -6914 NM_001281965 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding common_peak1_35_134_0.654482076008192_7.40405663505493_4.15232381088022-2 chr6 50399608 50400285 + 4.15232381088022 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -17109 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_14_133_-0.884045069046424_6.62406665593456_4.15139874381415 chr11 59425680 59426069 + 4.15139874381415 NA intron (NM_144521, intron 3 of 4) intron (NM_144521, intron 3 of 4) 24082 NM_144521 67826 Mm.26680 NM_144521 ENSMUSG00000009894 Snap47 1110031B06Rik|SNAP-47 synaptosomal-associated protein, 47 protein-coding unique_peak2_14_133_-0.884045069046424_6.62406665593456_4.15139874381415-2 chr9 70211235 70212333 + 4.15139874381415 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 4434 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding unique_peak2_14_133_-0.884045069046424_6.62406665593456_4.15139874381415 chr7 118712445 118713108 + 4.15139874381415 NA intron (NM_182995, intron 1 of 15) CpG 165 NM_182995 101565 Mm.23279 NM_182995 ENSMUSG00000033904 Ccp110 6330503K22Rik|AA415922|AI427129|AW557948|CP110 centriolar coiled coil protein 110 protein-coding common_peak2_37_146_0.627304169746882_7.51332442970981_4.15121064105517 chr14 66259654 66260633 + 4.15121064105517 NA intron (NM_172498, intron 1 of 29) URR1A|DNA|hAT-Charlie 20909 NM_172498 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_26_85_0.795942812137497_6.82423616077085_4.15090102620579-2 chr3 96032516 96033038 + 4.15090102620579 NA intron (NM_013841, intron 12 of 14) intron (NM_013841, intron 12 of 14) 25678 NM_013841 22365 Mm.263185 NM_013841 ENSMUSG00000015747 Vps45 AI462172|AW554165|mVps45 vacuolar protein sorting 45 protein-coding common_peak1_26_85_0.795942812137497_6.82423616077085_4.15090102620579 chr15 60165647 60166157 + 4.15090102620579 NA Intergenic Lx5b|LINE|L1 -149284 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_26_85_0.795942812137497_6.82423616077085_4.15090102620579-3 chr9 50905949 50906409 + 4.15090102620579 NA intron (NM_178710, intron 9 of 15) intron (NM_178710, intron 9 of 15) 49255 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding unique_peak2_16_149_-0.825282429521708_6.81617747573503_4.15090102620577-2 chr5 65882431 65883669 + 4.15090102620577 NA intron (NM_001081105, intron 1 of 2) intron (NM_001081105, intron 1 of 2) 19481 NM_001081105 74734 Mm.20323 NM_001081105 ENSMUSG00000029204 Rhoh 5830400A04Rik|AU019774|Arhh ras homolog family member H protein-coding common_peak1_16_149_-0.825282429521708_6.81617747573503_4.15090102620577-2 chr7 100606996 100607345 + 4.15090102620577 NA promoter-TSS (NM_001163663) promoter-TSS (NM_001163663) -416 NM_024287 19346 Mm.28650 NM_024287 ENSMUSG00000030704 Rab6a 2610028L11Rik|AA419671|Rab6 RAB6A, member RAS oncogene family protein-coding unique_peak2_16_149_-0.825282429521708_6.81617747573503_4.15090102620577-3 chr7 19920633 19921263 + 4.15090102620577 NA intron (NM_027514, intron 1 of 7) intron (NM_027514, intron 1 of 7) 195 NM_027514 52118 Mm.227506 NM_027514 ENSMUSG00000040511 Pvr 3830421F03Rik|CD155|D7Ertd458e|HVED|PVS|Taa1|Tage4|mE4|necl-5 poliovirus receptor protein-coding unique_peak2_16_149_-0.825282429521708_6.81617747573503_4.15090102620577 chr17 5491465 5492548 + 4.15090102620577 NA promoter-TSS (NM_146073) promoter-TSS (NM_146073) -594 NM_146073 224454 Mm.487663 NM_146073 ENSMUSG00000034265 Zdhhc14 B530001K09Rik|New1cp zinc finger, DHHC domain containing 14 protein-coding common_peak1_16_149_-0.825282429521708_6.81617747573503_4.15090102620577 chr7 43561744 43562136 + 4.15090102620577 NA promoter-TSS (NM_001008549) promoter-TSS (NM_001008549) -430 NM_001008549 210104 Mm.333821 NM_001008549 ENSMUSG00000056592 Zfp658 - zinc finger protein 658 protein-coding unique_peak1_18_47_1.01540170267573_6.09266335205902_4.15060805636577 chr14 72887611 72888049 + 4.15060805636577 NA Intergenic Intergenic -137773 NR_027860 668489 Mm.158324 NR_027860 Gm9199 EG668489 glycine cleavage system protein H (aminomethyl carrier) pseudogene pseudo unique_peak1_18_47_1.01540170267573_6.09266335205902_4.15060805636577-2 chr2 32160504 32160951 + 4.15060805636577 NA intron (NM_001159634, intron 1 of 31) intron (NM_001159634, intron 1 of 31) 9579 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak1_18_47_1.01540170267573_6.09266335205902_4.15060805636577-2 chr18 38994678 38994999 + 4.15060805636577 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 1693 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_18_47_1.01540170267573_6.09266335205902_4.15060805636577 chr10 8746440 8746832 + 4.15060805636577 NA intron (NM_175155, intron 10 of 19) intron (NM_175155, intron 10 of 19) 139434 NM_175155 70097 Mm.338275 NM_175155 ENSMUSG00000015305 Sash1 1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790 SAM and SH3 domain containing 1 protein-coding common_peak1_18_47_1.01540170267573_6.09266335205902_4.15060805636577-3 chr5 143269181 143269648 + 4.15060805636577 NA intron (NM_017467, intron 1 of 6) intron (NM_017467, intron 1 of 6) 608 NM_017467 54201 Mm.6666 NM_017467 ENSMUSG00000046658 Zfp316 Emzf1|Mzf3|Znf316 zinc finger protein 316 protein-coding common_peak2_64_323_0.437064517448272_8.55838226160876_4.1505376300795 chr13 12257185 12258401 + 4.1505376300795 NA intron (NM_001081128, intron 1 of 32) CpG 320 NM_001081128 238505 Mm.40335 NM_001081128 ENSMUSG00000021311 Mtr AI894170|D830038K18Rik|MS 5-methyltetrahydrofolate-homocysteine methyltransferase protein-coding common_peak1_606_6314_0.105945772920379_12.6775399051351_4.14999164215798 chr10 19491955 19497096 + 4.14999164215798 NA Intergenic RMER5|LTR|ERV1 -97433 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_84_766_-0.331440919650442_9.41736230767771_4.14977587874271 chr17 66100653 66101548 + 4.14977587874271 NA intron (NM_001278415, intron 1 of 8) intron (NM_001278415, intron 1 of 8) 459 NM_001278415 72900 Mm.2206 NM_028388 ENSMUSG00000024099 Ndufv2 2900010C23Rik NADH dehydrogenase (ubiquinone) flavoprotein 2 protein-coding common_peak1_158_1107_0.246134115547209_10.2368092238228_4.14899047649565 chr8 123253489 123255264 + 4.14899047649565 NA promoter-TSS (NM_028200) promoter-TSS (NM_028200) -154 NM_028200 72325 Mm.276193 NM_028200 ENSMUSG00000001062 Vps9d1 1300018I17Rik|2410004N05Rik|5DOS1|Vsp9d1 VPS9 domain containing 1 protein-coding unique_peak2_42_176_0.578121620170953_7.75666636016847_4.14871666281897 chr7 120860475 120861782 + 4.14871666281897 NA intron (NM_001267711, intron 2 of 17) intron (NM_001267711, intron 2 of 17) 9939 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak1_196_1964_-0.201206980520668_10.8397101068856_4.14839294457081 chr10 127321977 127324559 + 4.14839294457081 NA promoter-TSS (NM_146011) promoter-TSS (NM_146011) -459 NM_146011 216445 Mm.227198 NM_146011 ENSMUSG00000040345 Arhgap9 AU043488 Rho GTPase activating protein 9 protein-coding common_peak1_143_1376_-0.242790548703228_10.3059175697834_4.14781289857885 chr11 117831582 117833581 + 4.14781289857885 NA intron (NM_027827, intron 4 of 10) intron (NM_027827, intron 4 of 10) -6567 NM_009387 21877 Mm.2661 NM_009387 ENSMUSG00000025574 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 protein-coding common_peak1_59_288_0.460343061283382_8.40509721314237_4.1477628063096 chr8 66860258 66861062 + 4.1477628063096 NA exon (NM_001163564, exon 1 of 8) exon (NM_001163564, exon 1 of 8) 443 NM_001163564 234344 Mm.334561 NM_001163564 ENSMUSG00000014907 Naf1 Gm174 nuclear assembly factor 1 ribonucleoprotein protein-coding common_peak1_15_141_-0.853493856379514_6.72300019131493_4.14707435720791 chr17 33492196 33492637 + 4.14707435720791 NA Intergenic Intergenic -31780 NR_037707 224697 Mm.29304 NM_172619 ENSMUSG00000024299 Adamts10 9430006O18|AW045948|Adam-ts10|Adamts-10|Znmp a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10 protein-coding unique_peak2_15_141_-0.853493856379514_6.72300019131493_4.14707435720791 chr1 75317979 75318656 + 4.14707435720791 NA promoter-TSS (NM_001110831) promoter-TSS (NM_001110831) -680 NM_001110831 13437 Mm.24680 NM_016878 ENSMUSG00000026209 Dnpep AA407814 aspartyl aminopeptidase protein-coding common_peak1_15_141_-0.853493856379514_6.72300019131493_4.14707435720791-2 chr8 105899884 105900313 + 4.14707435720791 NA promoter-TSS (NM_173432) promoter-TSS (NM_173432) -376 NM_173432 244631 Mm.27627 NM_173432 ENSMUSG00000048310 Pskh1 AW539964|E130013P03Rik|b2b1230Clo protein serine kinase H1 protein-coding common_peak2_217_1682_0.201535085386043_10.817587004023_4.14696146220183 chr5 27790512 27792547 + 4.14696146220183 NA promoter-TSS (NM_018878) promoter-TSS (NM_018878) 21 NM_018878 55982 Mm.277190 NM_018878 ENSMUSG00000002221 Paxip1 D5Ertd149e|PTIP PAX interacting (with transcription-activation domain) protein 1 protein-coding common_peak2_187_1862_-0.207056249142907_10.7598838343702_4.14647808878221 chr16 38711990 38714636 + 4.14647808878221 NA promoter-TSS (NM_020260) promoter-TSS (NM_020260) -278 NM_020260 12549 Mm.370848 NM_020260 ENSMUSG00000022799 Arhgap31 5830477L08Rik|AU041750|Cdgap|D330026I07Rik Rho GTPase activating protein 31 protein-coding common_peak1_28_248_-0.611338617555512_7.65433262329032_4.1459657852427 chr7 97332250 97332823 + 4.1459657852427 NA intron (NM_001039039, intron 1 of 1) CpG 213 NM_001039039 622320 Mm.334029 NM_001039039 ENSMUSG00000044952 Kctd21 EG622320 potassium channel tetramerisation domain containing 21 protein-coding common_peak2_51_234_0.505516609262289_8.12927525119614_4.14404339798265 chr17 46828665 46830602 + 4.14404339798265 NA intron (NM_001100452, intron 3 of 10) RSINE1|SINE|B4 1780 NM_001100452 210982 Mm.37642 NM_001100452 ENSMUSG00000036568 Gltscr1l mKIAA0240 GLTSCR1-like protein-coding common_peak1_61_544_-0.396817903743626_8.89170346779247_4.14355080437436 chr11 70844662 70845481 + 4.14355080437436 NA intron (NM_001291141, intron 1 of 16) G-rich|Low_complexity|Low_complexity 310 NM_001291142 54189 Mm.7087 NM_019400 ENSMUSG00000020817 Rabep1 Rab5ep|rabaptin-5|rabaptin-5alpha rabaptin, RAB GTPase binding effector protein 1 protein-coding common_peak2_115_724_0.300050751982985_9.65186256089379_4.14350550987674 chr5 105144409 105146709 + 4.14350550987674 NA Intergenic Intergenic -5973 NM_001256005 17472 Mm.440525 NM_008620 ENSMUSG00000079363 Gbp4 AW228052|Mag-2|Mpa-2|Mpa2 guanylate binding protein 4 protein-coding common_peak2_308_3302_-0.153878854355503_11.6126218271078_4.1426134011417 chr2 119476393 119479024 + 4.1426134011417 NA promoter-TSS (NM_026574) promoter-TSS (NM_026574) -79 NM_026574 68142 Mm.330496 NM_026574 ENSMUSG00000034154 Ino80 2310079N15Rik|4632409L19Rik|Inoc1 INO80 complex subunit protein-coding common_peak1_31_112_0.702686611896336_7.17152226836336_4.14246021157164 chr2 173060766 173061434 + 4.14246021157164 NA Intergenic Intergenic 39198 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak2_106_986_-0.287935855100624_9.80293834690609_4.1424048124627 chr2 37358128 37359682 + 4.1424048124627 NA intron (NM_026176, intron 1 of 3) intron (NM_026176, intron 1 of 3) 427 NM_026176 67466 Mm.30709 NM_026176 ENSMUSG00000009030 Pdcl 1200011E13Rik|AW108059|PhLP1 phosducin-like protein-coding common_peak1_22_198_-0.698163816450139_7.28754271231858_4.14157958066705-2 chr17 84879807 84880366 + 4.14157958066705 NA Intergenic Intergenic -76655 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding unique_peak2_33_123_0.675952261773652_7.2921724412737_4.14157958066705 chr9 63691922 63692967 + 4.14157958066705 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 65550 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_22_198_-0.698163816450139_7.28754271231858_4.14157958066705 chr10 128742826 128743411 + 4.14157958066705 NA intron (NM_016811, intron 1 of 23) intron (NM_016811, intron 1 of 23) 938 NM_016811 13139 Mm.291235 NM_016811 ENSMUSG00000025357 Dgka 80kDa|AW146112|Dagk1 diacylglycerol kinase, alpha protein-coding common_peak1_49_433_-0.448923729121738_8.53708936788361_4.14004732524021 chr8 90795514 90796517 + 4.14004732524021 NA Intergenic ID_B1|SINE|B4 -32820 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_123_1163_-0.264968515801264_10.0523910850077_4.13961778678222 chr5 23711821 23713438 + 4.13961778678222 NA promoter-TSS (NR_038090) promoter-TSS (NR_038090) 38 NR_038090 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak1_178_1297_0.22746991742363_10.455809626711_4.13838247928221 chr8 72491480 72492731 + 4.13838247928221 NA intron (NM_177766, intron 1 of 5) CpG 509 NM_177766 270066 Mm.291461 NM_177766 ENSMUSG00000019731 Slc35e1 6030458H05|AA408278 solute carrier family 35, member E1 protein-coding common_peak2_478_4668_0.122517234466249_12.2501564904753_4.13750644361734 chr1 178334901 178338944 + 4.13750644361734 NA intron (NM_016805, intron 1 of 13) CpG 862 NM_016805 51810 Mm.86589 NM_016805 ENSMUSG00000039630 Hnrnpu AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U heterogeneous nuclear ribonucleoprotein U protein-coding common_peak1_53_469_-0.427697068539048_8.66266841229547_4.13750128778614 chr15 64185511 64186674 + 4.13750128778614 NA intron (NM_001276462, intron 3 of 27) intron (NM_001276462, intron 3 of 27) -125644 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_53_469_-0.427697068539048_8.66266841229547_4.13750128778614-2 chr18 36699444 36700339 + 4.13750128778614 NA Intergenic Intergenic -3966 NM_172831 240216 Mm.252323 NM_172831 ENSMUSG00000044719 E230025N22Rik EG240216 Riken cDNA E230025N22 gene protein-coding common_peak1_43_379_-0.48344555445064_8.32813283110563_4.13733609022431 chr1 131138207 131138901 + 4.13733609022431 NA promoter-TSS (NM_145508) promoter-TSS (NM_145508) -320 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak1_91_835_-0.31567370561466_9.54952227927355_4.1369207441112 chr9 63753678 63755582 + 4.1369207441112 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 3364 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_92_845_-0.31369713223236_9.56766528700377_4.13568735161295 chr10 94544699 94546571 + 4.13568735161295 NA intron (NM_172051, intron 1 of 3) intron (NM_172051, intron 1 of 3) -29622 NM_001168684 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 AW488095|C630016B22Rik|C88213|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak2_154_1495_-0.23210666827501_10.4308411257501_4.13525782825134 chr7 80582030 80584281 + 4.13525782825134 NA Intergenic Intergenic -48036 NM_001042527 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding common_peak2_140_1343_-0.245051819199457_10.269791513179_4.1348998238232 chr2 25459891 25462058 + 4.1348998238232 NA 5' UTR (NM_153557, exon 1 of 7) 5' UTR (NM_153557, exon 1 of 7) 120 NM_153557 227622 Mm.261780 NM_153557 ENSMUSG00000047617 BC029214 D930050G13Rik|Paxx cDNA sequence BC029214 protein-coding common_peak1_93_855_-0.311723587788771_9.58560519250676_4.1347665872902 chr15 58133783 58135109 + 4.1347665872902 NA intron (NM_027435, intron 1 of 27) intron (NM_027435, intron 1 of 27) 636 NM_027435 70472 Mm.221758 NM_027435 ENSMUSG00000022360 Atad2 2610509G12Rik ATPase family, AAA domain containing 2 protein-coding common_peak1_62_553_-0.392133006097406_8.91767566300049_4.13462737929699 chr17 10319880 10320526 + 4.13462737929699 NA promoter-TSS (NM_021881) promoter-TSS (NM_021881) 284 NR_037588 100526796 Mm.384135 NR_037588 Cahm B930003M22Rik colon adenocarcinoma hypermethylated RNA ncRNA common_peak2_84_472_0.365945474513097_9.06866911059594_4.13341186221314 chr14 100259685 100261407 + 4.13341186221314 NA Intergenic Intergenic -110750 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding common_peak1_68_610_-0.372433249571936_9.06881194503276_4.13341186221314 chr17 34586843 34587600 + 4.13341186221314 NA intron (NM_010929, intron 29 of 29) CpG-6279 -2585 NM_134116 106512 Mm.26584 NM_134116 ENSMUSG00000034786 Gpsm3 AA960287|AGS4 G-protein signalling modulator 3 (AGS3-like, C. elegans) protein-coding common_peak1_121_1142_-0.267477925981149_10.0248707252239_4.13286164570888 chr11 106687742 106689579 + 4.13286164570888 NA intron (NM_001305158, intron 6 of 14) intron (NM_001305158, intron 6 of 14) 26621 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak1_86_487_0.362060493102966_9.11176758411437_4.13169478451616 chr4 117969478 117970699 + 4.13169478451616 NA intron (NM_001285520, intron 5 of 11) intron (NM_001285520, intron 5 of 11) -40325 NM_001284192 11876 Mm.56897 NM_009711 ENSMUSG00000028539 Artn neublastin artemin protein-coding common_peak2_175_1726_-0.214417691275905_10.646843521891_4.13156963902977 chr11 121081323 121084567 + 4.13156963902977 NA Intergenic Intergenic -1806 NM_145373 209588 Mm.69553 NM_145373 ENSMUSG00000025165 Sectm1a BC010462 secreted and transmembrane 1A protein-coding common_peak2_378_3456_0.141726471625606_11.8261681240752_4.13070230398986 chr16 11174166 11178097 + 4.13070230398986 NA intron (NR_027502, intron 1 of 22) CpG 262 NR_027502 106205 Mm.226860 NM_145931 ENSMUSG00000037965 Zc3h7a A430104C18Rik|AI447294|AW556219|HSPC055|Zc3h7|Zc3hdc7 zinc finger CCCH type containing 7 A protein-coding common_peak2_249_2582_-0.174098837916938_11.2477825091595_4.13045549915297 chr9 46172993 46177940 + 4.13045549915297 NA intron (NM_027498, intron 4 of 24) ORR1B2|LTR|ERVL-MaLR -53164 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding common_peak1_402_3740_0.136478869258314_11.93744768518_4.12947563207392 chr15 97360293 97363144 + 4.12947563207392 NA intron (NM_172293, intron 4 of 5) intron (NM_172293, intron 4 of 5) -114431 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding unique_peak2_25_223_-0.651933677416672_7.48138808334927_4.12896897157056 chr18 35751681 35752455 + 4.12896897157056 NA Intergenic Intergenic -11514 NM_001289591 72512 Mm.45995 NM_028261 ENSMUSG00000024349 Tmem173 2610307O08Rik|ERIS|MPYS|Mita|STING transmembrane protein 173 protein-coding common_peak1_69_619_-0.368066379564349_9.09209121549207_4.1288369406982 chrX 38189436 38190373 + 4.1288369406982 NA 5' UTR (NM_020256, exon 1 of 2) 5' UTR (NM_020256, exon 1 of 2) 111 NM_001079513 56805 Mm.391248 NM_020256 ENSMUSG00000048047 Zbtb33 AW260253|E130014G12Rik|Kaiso|Znf-kaiso zinc finger and BTB domain containing 33 protein-coding common_peak1_203_1542_0.209373052929434_10.6962088730355_4.12792583152426 chr2 181286898 181288786 + 4.12792583152426 NA intron (NM_198169, intron 1 of 9) CpG 124 NM_198169 229004 Mm.220423 NM_198169 ENSMUSG00000038705 Gmeb2 AI839884 glucocorticoid modulatory element binding protein 2 protein-coding common_peak1_40_164_0.59512105081961_7.66388273965562_4.12707537745532 chr2 37452258 37452856 + 4.12707537745532 NA intron (NM_001033960, intron 1 of 18) intron (NM_001033960, intron 1 of 18) 303 NM_001033960 227800 Mm.383192 NM_146121 ENSMUSG00000035437 Rabgap1 Gapcena|mKIAA4104 RAB GTPase activating protein 1 protein-coding common_peak2_40_164_0.59512105081961_7.66388273965562_4.12707537745532 chr2 165452892 165454040 + 4.12707537745532 NA intron (NM_054055, intron 1 of 12) intron (NM_054055, intron 1 of 12) 19731 NM_054055 114644 Mm.250738 NM_054055 ENSMUSG00000018459 Slc13a3 NaDC-3|NaDC3|SDCT2 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 protein-coding common_peak1_78_706_-0.343467313696083_9.29383274796136_4.12694542222999 chr10 45027182 45028177 + 4.12694542222999 NA Intergenic MLT1J|LTR|ERVL-MaLR -39535 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak2_106_648_0.316895751356634_9.50052254367746_4.1267250258921 chr2 173045802 173047357 + 4.1267250258921 NA Intergenic Intergenic 24677 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak2_36_317_-0.533099304072945_8.04633330324788_4.12672215047286 chr6 54698813 54700122 + 4.12672215047286 NA 3' UTR (NM_001289740, exon 3 of 3) 3' UTR (NM_001289740, exon 3 of 3) 17843 NM_001289740 68235 Mm.233860 NM_026629 ENSMUSG00000038065 Mturn 2410066E13Rik|AI448550|B230212L03Rik maturin, neural progenitor differentiation regulator homolog (Xenopus) protein-coding unique_peak2_36_317_-0.533099304072945_8.04633330324788_4.12672215047286 chr2 155562179 155563917 + 4.12672215047286 NA TTS (NM_008180) TTS (NM_008180) -6118 NR_040613 74945 Mm.401956 NR_040613 ENSMUSG00000086529 Acss2os 4930471I20Rik acyl-CoA synthetase short-chain family member 2, opposite strand ncRNA common_peak2_32_282_-0.567338295171003_7.86098909524638_4.12652006611814 chr7 44838906 44840451 + 4.12652006611814 NA exon (NM_010215, exon 8 of 8) exon (NM_010215, exon 8 of 8) 3390 NM_010215 14204 Mm.2565 NM_010215 ENSMUSG00000074141 Il4i1 Fig1|Fig1-ps|LAAO|LAO interleukin 4 induced 1 protein-coding common_peak1_32_282_-0.567338295171003_7.86098909524638_4.12652006611814 chr5 72752906 72753526 + 4.12652006611814 NA promoter-TSS (NM_001122754) promoter-TSS (NM_001122754) -439 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak2_63_562_-0.38751322658235_8.94323449878905_4.12645216642244 chr1 80765073 80767108 + 4.12645216642244 NA Intergenic Intergenic -7537 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak1_169_1659_-0.21871336719544_10.5876108426366_4.12596999988859 chr15 64022965 64024697 + 4.12596999988859 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 36617 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_107_657_0.313488415477066_9.51868798147378_4.12469384053636 chr2 181679649 181681171 + 4.12469384053636 NA promoter-TSS (NM_009326) promoter-TSS (NM_009326) 100 NM_009326 21400 Mm.24245 NM_009326 ENSMUSG00000059540 Tcea2 AI326274|S-II-T1|SII-T1|Tceat transcription elongation factor A (SII), 2 protein-coding common_peak2_174_1715_-0.215282536097691_10.6371925694507_4.1244461028483 chr7 38106699 38109308 + 4.1244461028483 NA promoter-TSS (NM_007633) promoter-TSS (NM_007633) -513 NM_007633 12447 Mm.16110 NM_007633 ENSMUSG00000002068 Ccne1 AW538188|CycE1 cyclin E1 protein-coding common_peak2_89_511_0.352790948750988_9.17639547437549_4.12219927033767-2 chr6 47671941 47673521 + 4.12219927033767 NA promoter-TSS (NR_002841).8 promoter-TSS (NR_002841).8 -332 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_89_511_0.352790948750988_9.17639547437549_4.12219927033767 chr2 25538455 25541663 + 4.12219927033767 NA intron (NM_009422, intron 1 of 10) intron (NM_009422, intron 1 of 10) 6881 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding common_peak2_61_302_0.450120532447711_8.46823424969681_4.12102091576156 chr16 20301623 20302962 + 4.12102091576156 NA promoter-TSS (NM_001005767) promoter-TSS (NM_001005767) 70 NM_001005767 381038 Mm.371737 NM_001005767 ENSMUSG00000033918 Parl D16Ertd607e|PRO2207|PSARL1|PSENIP2|Psarl presenilin associated, rhomboid-like protein-coding common_peak2_44_387_-0.473734204622495_8.36304573987588_4.12088665610755 chr12 65064517 65066414 + 4.12088665610755 NA intron (NM_013902, intron 5 of 6) ORR1C2|LTR|ERVL-MaLR 8473 NM_013902 30795 Mm.28480 NM_013902 ENSMUSG00000020949 Fkbp3 25kDa|FKBP-3|FKBP25 FK506 binding protein 3 protein-coding common_peak1_44_387_-0.473734204622495_8.36304573987588_4.12088665610755 chr3 97158710 97159500 + 4.12088665610755 NA 5' UTR (NM_019800, exon 1 of 10) 5' UTR (NM_019800, exon 1 of 10) 328 NM_019800 66659 Mm.101368 NM_019800 ENSMUSG00000028093 Acp6 5730559A09Rik|ACPL1|AU022842|mPACPL1 acid phosphatase 6, lysophosphatidic protein-coding common_peak1_50_442_-0.443492111427561_8.56941683284124_4.12023035584678 chr8 104250860 104251452 + 4.12023035584678 NA intron (NM_029295, intron 1 of 3) CpG 295 NM_001286383 75458 Mm.269219 NM_029295 ENSMUSG00000054400 Cklf 1700001C14Rik|1810018M11Rik|A730028G07Rik|C32|CKLF1|CKLF3|CKLF4|CKLF5|Cklf2|Cklf6|HSPC224|UCK-1 chemokine-like factor protein-coding common_peak2_128_1215_-0.258065827036353_10.1188945999254_4.12013445762507 chr14 55671210 55672963 + 4.12013445762507 NA promoter-TSS (NM_008683) promoter-TSS (NM_008683) -149 NM_177992 105446 Mm.390685 NM_177992 ENSMUSG00000002326 Gmpr2 1810008P16Rik|5730544D12Rik|AA959850|GMPR 2 guanosine monophosphate reductase 2 protein-coding common_peak2_90_519_0.349977229691593_9.19735642787425_4.11995564973405 chr8 71881351 71882831 + 4.11995564973405 NA promoter-TSS (NM_145624) promoter-TSS (NM_145624) 23 NM_145624 236193 Mm.290790 NM_145624 ENSMUSG00000056019 Zfp709 BC021921|GIOT-4|HIT-40 zinc finger protein 709 protein-coding common_peak2_335_3639_-0.145798846542135_11.756823311815_4.11975500592328 chr19 8817857 8821836 + 4.11975500592328 NA promoter-TSS (NM_027412) promoter-TSS (NM_027412) 445 NM_001081196 68693 Mm.476519 NM_001081196 ENSMUSG00000071659 Hnrnpul2 1110031M08Rik|AI465155|Hnrpul2 heterogeneous nuclear ribonucleoprotein U-like 2 protein-coding unique_peak1_17_43_1.04525374323537_5.98205849025498_4.11891672489497-2 chr15 79400292 79400829 + 4.11891672489497 NA intron (NM_172608, intron 1 of 8) intron (NM_172608, intron 1 of 8) 2359 NM_001253817 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding unique_peak1_17_43_1.04525374323537_5.98205849025498_4.11891672489497 chr11 79059619 79060082 + 4.11891672489497 NA intron (NM_013571, intron 2 of 17) intron (NM_013571, intron 2 of 17) 36253 NR_045873 790910 Mm.440410 NR_045873 Gm11201 ENSMUSG00000072637|OTTMUSG00000000169 predicted gene 11201 ncRNA unique_peak1_17_43_1.04525374323537_5.98205849025498_4.11891672489497-3 chr9 63746492 63746971 + 4.11891672489497 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 11263 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_17_43_1.04525374323537_5.98205849025498_4.11891672489497 chr11 100843446 100843853 + 4.11891672489497 NA intron (NM_001113563, intron 1 of 18) intron (NM_001113563, intron 1 of 18) 6936 NM_001113563 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding common_peak1_100_599_0.328029503109576_9.39283344205067_4.11838077289723 chr10 39513640 39515312 + 4.11838077289723 NA intron (NM_008054, intron 4 of 13) intron (NM_008054, intron 4 of 13) -98458 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak2_91_527_0.347291307107769_9.21803977291234_4.11813997044034 chr1 85844635 85846972 + 4.11813997044034 NA intron (NM_133781, intron 6 of 8) URR1A|DNA|hAT-Charlie -48707 NM_022417 64294 Mm.29870 NM_022417 ENSMUSG00000026223 Itm2c 3110038L02Rik|BRI3|Bricd2c|E25|E25C|ITM3 integral membrane protein 2C protein-coding unique_peak1_13_27_1.25259751677397_5.43365368044459_4.11766476295455 chr11 96501966 96502317 + 4.11766476295455 NA intron (NM_001033186, intron 2 of 12) intron (NM_001033186, intron 2 of 12) 37550 NM_001177898 78473 Mm.395840 NM_001033186 ENSMUSG00000057058 Skap1 1700091G21Rik|Scap1|Skap-55 src family associated phosphoprotein 1 protein-coding unique_peak1_13_27_1.25259751677397_5.43365368044459_4.11766476295455-2 chr4 147927905 147928224 + 4.11766476295455 NA intron (NM_011122, intron 6 of 18) intron (NM_011122, intron 6 of 18) 8712 NM_011122 18822 Mm.23951 NM_011122 ENSMUSG00000019055 Plod1 2410042F05Rik|AI854890|AV007929|Lh1|Plod procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 protein-coding unique_peak2_92_535_0.344727530429818_9.23845295567268_4.11673419398189 chr4 101167431 101171318 + 4.11673419398189 NA intron (NM_146145, intron 11 of 24) intron (NM_146145, intron 11 of 24) 95908 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_81_735_-0.33550637980523_9.3558087661544_4.11601521214719 chr10 128376012 128377887 + 4.11601521214719 NA promoter-TSS (NM_172790) promoter-TSS (NM_172790) -175 NM_172790 237615 Mm.440177 NM_172790 ENSMUSG00000014498 Ankrd52 6430544C07|G431002C21Rik ankyrin repeat domain 52 protein-coding common_peak2_81_735_-0.33550637980523_9.3558087661544_4.11601521214719-2 chr15 58075285 58077328 + 4.11601521214719 NA 5' UTR (NM_001042438, exon 1 of 5) 5' UTR (NM_001042438, exon 1 of 5) 202 NM_001042438 22770 Mm.244931 NM_009572 ENSMUSG00000022361 Zhx1 - zinc fingers and homeoboxes 1 protein-coding common_peak1_67_345_0.422132655710158_8.6456945554918_4.11587328124081 chr10 128704144 128705122 + 4.11587328124081 NA intron (NM_183417, intron 1 of 7) CpG 418 NM_183417 12566 Mm.111326 NM_016756 ENSMUSG00000025358 Cdk2 A630093N05Rik cyclin-dependent kinase 2 protein-coding common_peak1_80_726_-0.339469470926716_9.33607681845624_4.11528885268546-2 chr2 150748939 150749849 + 4.11528885268546 NA intron (NM_172117, intron 1 of 13) CpG 313 NM_172117 12497 Mm.275524 NM_172117 ENSMUSG00000033068 Entpd6 2700026H11Rik|Cd39l2|NTPDase-6 ectonucleoside triphosphate diphosphohydrolase 6 protein-coding common_peak1_80_726_-0.339469470926716_9.33607681845624_4.11528885268546 chr13 101693183 101694324 + 4.11528885268546 NA intron (NM_001077495, intron 7 of 15) intron (NM_001077495, intron 7 of 15) -1123 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding unique_peak2_80_726_-0.339469470926716_9.33607681845624_4.11528885268546 chr1 82831509 82834767 + 4.11528885268546 NA Intergenic Intergenic -6322 NM_001310713 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding common_peak1_57_274_0.471987817286903_8.33928171705547_4.11369560615113 chr7 72260717 72261653 + 4.11369560615113 NA intron (NM_001024703, intron 1 of 22) Lx7|LINE|L1 45410 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak2_57_274_0.471987817286903_8.33928171705547_4.11369560615113 chr4 123411111 123412548 + 4.11369560615113 NA promoter-TSS (NM_001167918) promoter-TSS (NM_001167918) 82 NM_001167918 442834 Mm.483803 NM_001167918 D830031N03Rik Kiaa0754|mKIAA0754 RIKEN cDNA D830031N03 gene protein-coding common_peak1_38_152_0.615555606915208_7.56516564615026_4.11264472024212 chr1 21962069 21962815 + 4.11264472024212 NA promoter-TSS (NM_001160139) promoter-TSS (NM_001160139) 208 NM_001310477 226922 Mm.336519 NM_023872 ENSMUSG00000028033 Kcnq5 7730402H11|9230107O05Rik|AA589396|D1Mgi1 potassium voltage-gated channel, subfamily Q, member 5 protein-coding common_peak2_76_411_0.390221013589848_8.88161103397814_4.11250336009703 chr1 86343792 86345319 + 4.11250336009703 NA TTS (NM_010880) TTS (NM_010880) 6730 NR_028478 100303740 Mm.154378 NR_028478 ENSMUSG00000064837 Snora75 MBI-55 small nucleolar RNA, H/ACA box 75 snoRNA common_peak1_49_221_0.518211636972635_8.05352168483642_4.11236986235667 chr2 79269015 79269953 + 4.11236986235667 NA intron (NM_010576, intron 2 of 27) intron (NM_010576, intron 2 of 27) 14058 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_112_1047_-0.277903503365049_9.89447124985493_4.11222796691399 chr2 164070089 164071220 + 4.11222796691399 NA 5' UTR (NM_025996, exon 1 of 7) 5' UTR (NM_025996, exon 1 of 7) 448 NM_025996 67145 Mm.23173 NM_025996 ENSMUSG00000018322 Tomm34 2610100K07Rik|TOM34 translocase of outer mitochondrial membrane 34 protein-coding unique_peak2_11_108_-0.981021167871186_6.27767374084133_4.1120532858218 chr18 15052745 15053458 + 4.1120532858218 NA intron (NM_134112, intron 1 of 4) intron (NM_134112, intron 1 of 4) 10481 NM_001142731 106931 Mm.329299 NM_134112 ENSMUSG00000036225 Kctd1 4933402K10Rik|AI661543|AW553000 potassium channel tetramerisation domain containing 1 protein-coding unique_peak2_11_108_-0.981021167871186_6.27767374084133_4.1120532858218-2 chr19 18615990 18616982 + 4.1120532858218 NA intron (NM_017375, intron 1 of 9) intron (NM_017375, intron 1 of 9) 15327 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak2_138_925_0.267116397532366_9.98842658202642_4.11067316970896 chr10 57531517 57532924 + 4.11067316970896 NA intron (NM_019760, intron 1 of 8) CpG 309 NM_019760 56442 Mm.29344 NM_019760 ENSMUSG00000019877 Serinc1 1500011D18Rik|AI315070|AIGP-2|TMS-2|Tde1l|Tde2|Tms2|mKIAA1253 serine incorporator 1 protein-coding common_peak2_308_2655_0.160642968583097_11.4553609156385_4.10988250180246 chr11 60104682 60107282 + 4.10988250180246 NA intron (NM_009021, intron 1 of 5) CpG 969 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak2_220_1714_0.19854831498883_10.8432670185546_4.10890724790348 chr13 41356807 41359878 + 4.10890724790348 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) 659 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_28_96_0.74875047232544_6.97428807834985_4.10777786523467-2 chr8 72165537 72166203 + 4.10777786523467 NA intron (NM_023126, intron 1 of 7) intron (NM_023126, intron 1 of 7) 4670 NM_023126 17274 Mm.162811 NM_023126 ENSMUSG00000003037 Rab8a AA409338|Mel RAB8A, member RAS oncogene family protein-coding common_peak1_28_96_0.74875047232544_6.97428807834985_4.10777786523467 chr12 28800916 28801520 + 4.10777786523467 NA intron (NM_201357, intron 3 of 8) intron (NM_201357, intron 3 of 8) 49390 NM_201357 380752 Mm.273724 NM_201357 ENSMUSG00000036613 Tssc1 D12Ertd604e|Eipr1 tumor suppressing subtransferable candidate 1 protein-coding unique_peak2_28_96_0.74875047232544_6.97428807834985_4.10777786523467 chr17 79867848 79868637 + 4.10777786523467 NA intron (NM_001286647, intron 1 of 12) intron (NM_001286647, intron 1 of 12) 27881 NM_178050 56298 Mm.175403 NM_019717 ENSMUSG00000059811 Atl2 2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2 atlastin GTPase 2 protein-coding common_peak1_59_525_-0.403650245508242_8.83709386653818_4.10764292005713 chrX 73915238 73916078 + 4.10764292005713 NA Intergenic Intergenic -4360 NM_001162424 171207 Mm.482337 NM_138630 ENSMUSG00000031389 Arhgap4 A130009C12Rik|A530015A20Rik|Rgc1|c1|mKIAA0131 Rho GTPase activating protein 4 protein-coding unique_peak2_24_214_-0.662177657453077_7.41710402086292_4.10755199053729 chr4 59247027 59248741 + 4.10755199053729 NA Intergenic (CAAAA)n|Simple_repeat|Simple_repeat -12167 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_55_487_-0.417560276358605_8.72195719938358_4.10755119828768 chr12 69168295 69168908 + 4.10755119828768 NA promoter-TSS (NM_001081406) promoter-TSS (NM_001081406) -213 NM_001081406 69706 Mm.28847 NM_027178 ENSMUSG00000034883 Lrr1 2410005L11Rik|AU021780|LRR-1|Ppil5 leucine rich repeat protein 1 protein-coding common_peak1_55_487_-0.417560276358605_8.72195719938358_4.10755119828768-2 chr5 140567530 140568343 + 4.10755119828768 NA Intergenic Intergenic -2869 NM_030022 77998 Mm.160040 NM_030022 ENSMUSG00000036586 Grifin E130101O17Rik galectin-related inter-fiber protein protein-coding common_peak2_241_1931_0.187299776986031_11.0095292673288_4.10740011215683 chr18 12127598 12129908 + 4.10740011215683 NA promoter-TSS (NM_024182) promoter-TSS (NM_024182) -97 NM_024182 66878 Mm.28551 NM_024182 ENSMUSG00000024404 Riok3 1200013N13Rik|D18Ertd331e|E130306C24Rik|Sudd RIO kinase 3 protein-coding common_peak2_83_755_-0.331543158049861_9.39647084519614_4.10707126560939 chr7 110018001 110019320 + 4.10707126560939 NA intron (NM_181517, intron 1 of 24) CpG 235 NM_181517 233726 Mm.222328 NM_181517 ENSMUSG00000066232 Ipo7 A330055O14Rik|C330016G14|Imp7|Ranbp7 importin 7 protein-coding common_peak2_43_183_0.562848097823294_7.80498600496866_4.10578386175994 chr7 24547062 24547730 + 4.10578386175994 NA intron (NM_009532, intron 1 of 16) intron (NM_009532, intron 1 of 16) 246 NM_009532 22594 Mm.4347 NM_009532 ENSMUSG00000051768 Xrcc1 Xrcc-1 X-ray repair complementing defective repair in Chinese hamster cells 1 protein-coding common_peak1_244_1962_0.186137366322834_11.0319131406276_4.10523053077895 chr17 31077678 31079762 + 4.10523053077895 NA intron (NM_009593, intron 2 of 14) intron (NM_009593, intron 2 of 14) 21026 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak1_117_742_0.294920315689586_9.68467855838339_4.10190746830513 chr17 24413407 24414508 + 4.10190746830513 NA promoter-TSS (NM_009070) promoter-TSS (NM_009070) 556 NR_033554 654822 Mm.489806 NM_001039561 ENSMUSG00000073437 D330041H03Rik - RIKEN cDNA D330041H03 gene ncRNA unique_peak2_6_70_-1.31640699185947_5.49154362357495_4.10152004130839 chr12 92529755 92530367 + 4.10152004130839 NA Intergenic Intergenic -680904 NM_011344 20338 Mm.250605 NM_011344 ENSMUSG00000020964 Sel1l AW493766|Sel1h|mKIAA4137 sel-1 suppressor of lin-12-like (C. elegans) protein-coding unique_peak2_6_70_-1.31640699185947_5.49154362357495_4.10152004130839-2 chr4 132077553 132078149 + 4.10152004130839 NA Intergenic ID_B1|SINE|B4 -2538 NM_001128607 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding unique_peak2_6_70_-1.31640699185947_5.49154362357495_4.10152004130839-4 chrX 153006850 153007551 + 4.10152004130839 NA intron (NM_001137547, intron 1 of 1) CpG 731 NM_001137547 635253 Mm.426169 NM_001137547 ENSMUSG00000067215 Usp51 AV136873 ubiquitin specific protease 51 protein-coding unique_peak2_6_70_-1.31640699185947_5.49154362357495_4.10152004130839-3 chr6 115994887 115995475 + 4.10152004130839 NA promoter-TSS (NM_026376) promoter-TSS (NM_026376) -176 NM_026376 67784 Mm.3085 NM_026376 ENSMUSG00000030123 Plxnd1 6230425C21Rik|b2b1863Clo|b2b553Clo plexin D1 protein-coding common_peak1_20_181_-0.730319996400199_7.1426346419986_4.1009163577106 chr1 85680459 85680962 + 4.1009163577106 NA intron (NM_001313713, intron 10 of 15) intron (NM_001313713, intron 10 of 15) 30722 NM_001313714 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding common_peak1_20_181_-0.730319996400199_7.1426346419986_4.1009163577106-2 chr3 90082097 90082690 + 4.1009163577106 NA intron (NM_001271764, intron 1 of 8) B3|SINE|B2 2872 NM_001293749 59069 Mm.240839 NM_022314 ENSMUSG00000027940 Tpm3 TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm tropomyosin 3, gamma protein-coding common_peak1_19_172_-0.743494000005948_7.06288122763375_4.10091501266763 chr15 60115904 60116387 + 4.10091501266763 NA Intergenic L1_Mus2|LINE|L1 -99527 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_122_1151_-0.264347220223602_10.0377513913305_4.10008194308937-2 chr6 48601392 48602803 + 4.10008194308937 NA Intergenic CpG 8214 NM_001079904 58887 Mm.219183 NM_175099 ENSMUSG00000052751 Repin1 AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 replication initiator 1 protein-coding common_peak1_122_1151_-0.264347220223602_10.0377513913305_4.10008194308937 chr14 55671503 55672747 + 4.10008194308937 NA promoter-TSS (NM_008683) promoter-TSS (NM_008683) -110 NM_177992 105446 Mm.390685 NM_177992 ENSMUSG00000002326 Gmpr2 1810008P16Rik|5730544D12Rik|AA959850|GMPR 2 guanosine monophosphate reductase 2 protein-coding common_peak2_228_2333_-0.183120950949176_11.0970283702328_4.09974706669325 chr10 58367926 58372571 + 4.09974706669325 NA intron (NM_026148, intron 1 of 9) intron (NM_026148, intron 1 of 9) -1206 NM_201242 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak2_182_1336_0.223870217106903_10.4967188586468_4.09949658376029 chr7 141326980 141328810 + 4.09949658376029 NA promoter-TSS (NM_027797) promoter-TSS (NM_027797) -170 NM_001282076 54006 Mm.28392 NM_016874 ENSMUSG00000058886 Deaf1 AU042387|C230009B13Rik|NUDR deformed epidermal autoregulatory factor 1 (Drosophila) protein-coding common_peak1_159_1548_-0.226150267599724_10.4840462949897_4.09861128705827 chr6 128835004 128836287 + 4.09861128705827 NA Intergenic Intergenic -9330 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding unique_peak2_8_85_-1.14819170401579_5.8521689026942_4.09658885762882-2 chr18 20891406 20892230 + 4.09658885762882 NA intron (NM_177038, intron 1 of 28) intron (NM_177038, intron 1 of 28) 4260 NM_177038 75964 Mm.273769 NM_029491 ENSMUSG00000033382 Trappc8 5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012 trafficking protein particle complex 8 protein-coding unique_peak1_16_39_1.08160816608681_5.86273217793077_4.09658885762882 chr6 142539461 142539901 + 4.09658885762882 NA Intergenic Tigger5|DNA|TcMar-Tigger 31675 NM_008428 16523 Mm.1482 NM_008428 ENSMUSG00000030247 Kcnj8 AI448900|Kir6.1|gnite|slmbr|sltr|uKATP-1 potassium inwardly-rectifying channel, subfamily J, member 8 protein-coding common_peak1_16_39_1.08160816608681_5.86273217793077_4.09658885762882 chr1 21379764 21380213 + 4.09658885762882 NA Intergenic Intergenic -3568 NM_001113187 98582 Mm.326336 NM_001113187 ENSMUSG00000085079 Khdc1b AU014713|AU015226|AU024076|AY238603|C85331|C86372|C88118|Khdc1|Khdc1c KH domain containing 1B protein-coding common_peak1_16_39_1.08160816608681_5.86273217793077_4.09658885762882-3 chr2 35691307 35691604 + 4.09658885762882 NA promoter-TSS (NM_001001602) promoter-TSS (NM_001001602) -539 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_16_39_1.08160816608681_5.86273217793077_4.09658885762882-2 chr17 87108729 87109208 + 4.09658885762882 NA intron (NM_019654, intron 1 of 2) intron (NM_019654, intron 1 of 2) 1289 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding unique_peak2_8_85_-1.14819170401579_5.8521689026942_4.09658885762882-3 chr19 6418244 6418727 + 4.09658885762882 NA promoter-TSS (NM_001205234) promoter-TSS (NM_001205234) -253 NM_001205235 18190 Mm.329616 NM_020253 ENSMUSG00000033768 Nrxn2 6430591O13Rik|mKIAA0921 neurexin II protein-coding unique_peak2_8_85_-1.14819170401579_5.8521689026942_4.09658885762882 chr16 93391654 93392344 + 4.09658885762882 NA Intergenic Intergenic 22279 NR_030429 791074 NR_030429 ENSMUSG00000076457 Mir802 Mirn802|mir-802|mmu-mir-802 microRNA 802 ncRNA common_peak2_79_434_0.379487259267398_8.95461522036979_4.09566832063676 chr10 7062074 7064220 + 4.09566832063676 NA Intergenic Intergenic -39962 NM_001033391 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak1_114_716_0.300737082269926_9.63619784983687_4.09532476355844 chr11 86813681 86815446 + 4.09532476355844 NA intron (NR_106195, intron 2 of 8) MMVL30-int|LTR|ERV1 -6903 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding common_peak1_56_496_-0.412603322012114_8.75080038055623_4.09421629755121 chr1 191574593 191575568 + 4.09421629755121 NA promoter-TSS (NM_001306204) promoter-TSS (NM_001306204) 464 NM_001305233 76843 Mm.189102 NM_029766 ENSMUSG00000037474 Dtl 2810047L02Rik|5730564G15Rik|L2dtl|Ramp denticleless E3 ubiquitin protein ligase protein-coding common_peak1_22_66_0.872371613635738_6.50227499727564_4.0926466402225 chr15 64234491 64234956 + 4.0926466402225 NA intron (NM_001276462, intron 1 of 27) intron (NM_001276462, intron 1 of 27) 77950 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_102_945_-0.294148489562655_9.73862212855807_4.09255065986789 chr17 44104915 44106487 + 4.09255065986789 NA 5' UTR (NM_199016, exon 1 of 4) 5' UTR (NM_199016, exon 1 of 4) 107 NM_199016 224794 Mm.255971 NM_199016 ENSMUSG00000023961 Enpp4 4933413N07Rik|AA986363|AI195364|E-NPP 4|Gm90|mKIAA0879 ectonucleotide pyrophosphatase/phosphodiesterase 4 protein-coding common_peak2_92_844_-0.311990810281957_9.56681212602857_4.09146993161723 chr6 130133792 130137603 + 4.09146993161723 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -5799 NM_001101620 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding common_peak1_14_31_1.18204412141135_5.59102206070567_4.0914635553006 chr1 86299357 86299682 + 4.0914635553006 NA Intergenic Intergenic -3702 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak1_14_31_1.18204412141135_5.59102206070567_4.0914635553006-3 chr5 72648086 72648466 + 4.0914635553006 NA intron (NM_001081205, intron 1 of 5) intron (NM_001081205, intron 1 of 5) 480 NM_001081205 70701 Mm.38884 NM_001081205 ENSMUSG00000067219 Nipal1 3830408G10Rik|Npal1 NIPA-like domain containing 1 protein-coding common_peak1_14_31_1.18204412141135_5.59102206070567_4.0914635553006-2 chr3 65658623 65658974 + 4.0914635553006 NA promoter-TSS (NR_106200) promoter-TSS (NR_106200) -490 NR_106200 102465905 NR_106200 ENSMUSG00000098944 Mir8120 Gm27637|mmu-mir-8120 microRNA 8120 ncRNA common_peak1_152_1472_-0.232736421755108_10.4081735041583_4.0907340768738 chr4 134734119 134735995 + 4.0907340768738 NA Intergenic Intergenic -30767 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak1_112_699_0.304308386340072_9.60336530500236_4.09044992247171-2 chr5 150673773 150674789 + 4.09044992247171 NA intron (NM_175310, intron 1 of 34) CpG 454 NM_175310 100710 Mm.32959 NM_175310 ENSMUSG00000034021 Pds5b AI646570|AS3|AW212954|Aprin|Tg(Wap-ERBB2)229Wzw|WAP-Her-2|mKIAA0979 PDS5 cohesin associated factor B protein-coding common_peak1_112_699_0.304308386340072_9.60336530500236_4.09044992247171 chr15 101266034 101267664 + 4.09044992247171 NA promoter-TSS (NM_010444) promoter-TSS (NM_010444) 3 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding common_peak1_33_290_-0.554726770747756_7.90751195753441_4.08992180484422 chr7 126861215 126861901 + 4.08992180484422 NA promoter-TSS (NM_153580) promoter-TSS (NM_153580) -95 NM_153580 233875 Mm.486253 NM_153580 ENSMUSG00000030689 Ino80e AI225782|AI854876|Ccdc85|Ccdc95 INO80 complex subunit E protein-coding common_peak2_70_367_0.409597589790005_8.72836075095201_4.08964141235572 chr2 11374578 11376204 + 4.08964141235572 NA intron (NR_040615, intron 1 of 2) intron (NR_040615, intron 1 of 2) 23109 NR_040615 77543 Mm.490670 NR_040615 ENSMUSG00000102674 8030442B05Rik - RIKEN cDNA 8030442B05 gene ncRNA common_peak2_0_23_-3.19515848234141_2.98738325955045_4.08960682824985 chrX 122831304 122831537 + 4.08960682824985 NA Intergenic (CATTC)n|Simple_repeat|Simple_repeat -272103 NM_001310652 73061 Mm.292979 NM_028426 ENSMUSG00000079450 Cldn34c1 3110007F17Rik claudin 34C1 protein-coding common_peak1_23_205_-0.672725059091124_7.35013799763766_4.08934277740393-2 chr8 81013619 81014122 + 4.08934277740393 NA exon (NM_027554, exon 1 of 10) exon (NM_027554, exon 1 of 10) 1036 NM_027554 74841 Mm.246018 NM_027554 ENSMUSG00000038250 Usp38 4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891 ubiquitin specific peptidase 38 protein-coding common_peak1_23_205_-0.672725059091124_7.35013799763766_4.08934277740393 chr4 156109245 156109840 + 4.08934277740393 NA promoter-TSS (NM_177205) promoter-TSS (NM_177205) -456 NM_145557 230996 Mm.318925 NM_145557 ENSMUSG00000059939 9430015G10Rik - RIKEN cDNA 9430015G10 gene protein-coding unique_peak2_23_205_-0.672725059091124_7.35013799763766_4.08934277740393 chr11 98392714 98394144 + 4.08934277740393 NA intron (NM_001033537, intron 3 of 7) intron (NM_001033537, intron 3 of 7) 6797 NM_008890 18948 Mm.57030 NM_008890 ENSMUSG00000038216 Pnmt Pent phenylethanolamine-N-methyltransferase protein-coding common_peak2_34_129_0.659077901495079_7.35190676377599_4.08934277740388 chr1 136674490 136675753 + 4.08934277740388 NA Intergenic Intergenic -8275 NR_045324 100503460 Mm.30630 NR_045324 ENSMUSG00000097113 Gm19705 - predicted gene, 19705 ncRNA common_peak1_34_129_0.659077901495079_7.35190676377599_4.08934277740388 chr13 29855103 29855665 + 4.08934277740388 NA intron (NR_131896, intron 1 of 16) CpG 289 NR_131896 68916 Mm.212227 NM_144536 ENSMUSG00000006191 Cdkal1 1190005B03Rik|6620401C13Rik CDK5 regulatory subunit associated protein 1-like 1 protein-coding common_peak1_26_230_-0.629541474576462_7.53697830412783_4.08929405188869 chr6 97215767 97216412 + 4.08929405188869 NA intron (NM_022992, intron 1 of 2) intron (NM_022992, intron 1 of 2) 5297 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak1_208_2100_-0.193114830148303_10.9403030315989_4.08896074305473 chr6 72438552 72440443 + 4.08896074305473 NA promoter-TSS (NM_145569) promoter-TSS (NM_145569) 61 NM_145569 232087 Mm.29815 NM_145569 ENSMUSG00000053907 Mat2a D630045P18Rik methionine adenosyltransferase II, alpha protein-coding common_peak2_80_442_0.375179194437861_8.97875248577395_4.0887802123379 chr2 170168823 170170162 + 4.0887802123379 NA Intergenic Intergenic -26817 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_30_107_0.711794702570838_7.11078485344889_4.08647254923304 chr12 111945913 111946895 + 4.08647254923304 NA Intergenic Intergenic -1922 NR_029464 77675 Mm.98331 NR_029464 5033406O09Rik 9130204G15Rik RIKEN cDNA 5033406O09 gene ncRNA common_peak1_221_1725_0.197313729372096_10.851873613865_4.08625460188048 chr2 166629278 166632065 + 4.08625460188048 NA intron (NM_177782, intron 5 of 39) intron (NM_177782, intron 5 of 39) -42047 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_15_35_1.12632826168286_5.73308913228374_4.08621821320449 chr11 70810889 70811226 + 4.08621821320449 NA intron (NM_001045526, intron 1 of 4) B1_Mur4|SINE|Alu 1504 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding unique_peak1_15_35_1.12632826168286_5.73308913228374_4.08621821320449 chr1 21277394 21277827 + 4.08621821320449 NA Intergenic RLTR20A3_MM|LTR|ERVK 20702 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo unique_peak2_40_351_-0.497988353571871_8.21043744185136_4.08471247020913 chr4 134186150 134187166 + 4.08471247020913 NA intron (NM_144527, intron 1 of 13) CpG 427 NM_144527 70012 Mm.26542 NM_144527 ENSMUSG00000037443 Cep85 2410030J07Rik|AI173272|AI173504|Ccdc21 centrosomal protein 85 protein-coding common_peak1_144_1385_-0.239942640746325_10.3167402217641_4.08320924834485 chr12 105784694 105785816 + 4.08320924834485 NA intron (NM_011112, intron 1 of 21) CpG 553 NM_011112 18789 Mm.255877 NM_011112 ENSMUSG00000021111 Papola Pap|PapIII|Plap poly (A) polymerase alpha protein-coding common_peak2_44_189_0.556323029233684_7.84801712294779_4.08286242979393 chr9 62420753 62421904 + 4.08286242979393 NA exon (NM_175484, exon 12 of 12) exon (NM_175484, exon 12 of 12) 79985 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_150_1449_-0.233316799916745_10.3851787849439_4.08261178794443 chr10 83336749 83338460 + 4.08261178794443 NA intron (NM_177388, intron 1 of 10) CpG 213 NM_177388 338365 Mm.67073 NM_177388 ENSMUSG00000034591 Slc41a2 A230035L05Rik|SLC41A1-L1 solute carrier family 41, member 2 protein-coding common_peak1_177_1747_-0.211858789550055_10.6655600747256_4.082069621047 chr19 4395907 4397183 + 4.082069621047 NA 5' UTR (NM_001001984, exon 1 of 21) 5' UTR (NM_001001984, exon 1 of 21) 532 NM_001001984 225876 Mm.31941 NM_001001984 ENSMUSG00000054611 Kdm2a 100043628|5530401A10Rik|AA589516|AW536790|Cxxc8|Fbl11|Fbl7|Fbxl11|Gm4560|Jhdm1|Jhdm1a|lalina lysine (K)-specific demethylase 2A protein-coding common_peak2_32_118_0.682502184352936_7.23606885548441_4.08157851999904 chr4 43875338 43876153 + 4.08157851999904 NA intron (NM_016678, intron 1 of 20) CpG 215 NM_016678 53614 Mm.331573 NM_016678 ENSMUSG00000028476 Reck St15|mRECK reversion-inducing-cysteine-rich protein with kazal motifs protein-coding common_peak1_156_1515_-0.228578403765443_10.4517648362884_4.08054472310468 chr9 70656101 70657269 + 4.08054472310468 NA exon (NM_172772, exon 1 of 9) exon (NM_172772, exon 1 of 9) 489 NM_172772 235461 Mm.170855 NM_172772 ENSMUSG00000042444 Fam63b AI465301|B230380D07Rik|mKIAA1164 family with sequence similarity 63, member B protein-coding common_peak2_329_2892_0.153687237795957_11.5751942268276_4.07983557420392 chr11 77684966 77688823 + 4.07983557420392 NA intron (NM_001024205, intron 1 of 3) AT_rich|Low_complexity|Low_complexity 755 NM_001024205 68564 Mm.428996 NM_001024205 ENSMUSG00000037857 Nufip2 1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321 nuclear fragile X mental retardation protein interacting protein 2 protein-coding common_peak1_197_1484_0.211819559312392_10.6421569953443_4.07918003477927 chr9 115608354 115611203 + 4.07918003477927 NA Intergenic Intergenic 227959 NR_130329 100316675 NR_130329 ENSMUSG00000080409 Mir467h Mirn467h|mmu-mir-467h microRNA 467h ncRNA common_peak2_197_1484_0.211819559312392_10.6421569953443_4.07918003477927 chr2 122117542 122119256 + 4.07918003477927 NA promoter-TSS (NM_145531) promoter-TSS (NM_145531) -13 NM_145531 214585 Mm.222303 NM_145531 ENSMUSG00000033396 Spg11 6030465E24Rik|A330015I11|C530005A01Rik spastic paraplegia 11 protein-coding common_peak2_41_171_0.577822200282757_7.71517585484348_4.07908257541133 chr12 99944585 99945792 + 4.07908257541133 NA intron (NM_028354, intron 14 of 15) intron (NM_028354, intron 14 of 15) -19311 NM_001164426 217826 Mm.312335 NM_146037 ENSMUSG00000045404 Kcnk13 BB085247|F730021E22Rik|Gm1570|Gm1685 potassium channel, subfamily K, member 13 protein-coding common_peak1_77_696_-0.345459085074205_9.27228530333132_4.07877993683701-2 chr15 86056645 86057919 + 4.07877993683701 NA promoter-TSS (NM_172611) promoter-TSS (NM_172611) -413 NM_172611 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_77_696_-0.345459085074205_9.27228530333132_4.07877993683701 chr10 19187512 19188717 + 4.07877993683701 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 20876 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_77_696_-0.345459085074205_9.27228530333132_4.07877993683701-3 chr9 73054823 73056589 + 4.07877993683701 NA intron (NM_023635, intron 1 of 5) MER5A|DNA|hAT-Charlie -8442 NM_001301232 11891 Mm.34867 NM_023635 ENSMUSG00000032202 Rab27a 2210402C08Rik|2410003M20Rik|4933437C11Rik|ash RAB27A, member RAS oncogene family protein-coding common_peak2_140_944_0.263095084470867_10.0157180613439_4.07868865673667 chr1 132476338 132478115 + 4.07868865673667 NA promoter-TSS (NM_172517) promoter-TSS (NM_172517) -141 NM_172517 213464 Mm.132868 NM_172517 ENSMUSG00000026439 Rbbp5 4933411J24Rik|C330016J05 retinoblastoma binding protein 5 protein-coding unique_peak2_18_164_-0.765958010848926_6.98334320882135_4.07793575231994 chr2 28517447 28518425 + 4.07793575231994 NA intron (NM_001145834, intron 1 of 17) intron (NM_001145834, intron 1 of 17) 4769 NM_001145834 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding common_peak2_69_618_-0.365737573504374_9.09092681246208_4.07726733463332 chr11 115563649 115564907 + 4.07726733463332 NA promoter-TSS (NM_001002929) promoter-TSS (NM_001002929) -166 NM_001002929 445007 Mm.4379 NM_001002929 ENSMUSG00000020739 Nup85 Pcnt1|frount nucleoporin 85 protein-coding common_peak2_85_480_0.362446397670263_9.09111628260517_4.07726733463312 chr12 16591033 16592560 + 4.07726733463312 NA Intergenic Intergenic -2026 NM_172950 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak2_115_1078_-0.273591212602735_9.93868354318665_4.07719197913649 chr17 56275669 56278211 + 4.07719197913649 NA promoter-TSS (NM_174989) promoter-TSS (NM_174989) -173 NM_174989 106759 Mm.203952 NM_174989 ENSMUSG00000047123 Ticam1 AW046014|AW547018|TICAM-1|TRIF toll-like receptor adaptor molecule 1 protein-coding common_peak1_132_873_0.272410843161762_9.90769489108148_4.0765568782623 chr2 166718549 166720408 + 4.0765568782623 NA intron (NR_105783, intron 2 of 2) MLT1L|LTR|ERVL-MaLR -5646 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding common_peak1_106_649_0.314674511439957_9.50163316363579_4.07635447851477 chr1 165840483 165841535 + 4.07635447851477 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 52328 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_21_61_0.905601432307076_6.40699702654041_4.07431776812821-2 chr5 91959198 91959783 + 4.07431776812821 NA intron (NM_026557, intron 1 of 8) MTB_Mm|LTR|ERVL-MaLR 3066 NR_073442 68098 Mm.159453 NM_026557 ENSMUSG00000029397 Rchy1 ARNIP|CHIMP|Pirh2|Zfp363|Znf363 ring finger and CHY zinc finger domain containing 1 protein-coding common_peak1_21_61_0.905601432307076_6.40699702654041_4.07431776812821 chr17 57059624 57060064 + 4.07431776812821 NA promoter-TSS (NM_025877) promoter-TSS (NM_025877) 19 NM_025877 66972 Mm.23720 NM_025877 ENSMUSG00000046329 Slc25a23 2310067G05Rik|SCaMC-3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 protein-coding unique_peak1_21_61_0.905601432307076_6.40699702654041_4.07431776812821 chr1 86295830 86296389 + 4.07431776812821 NA Intergenic Intergenic -7112 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak1_166_1625_-0.220364936387067_10.5569290738815_4.07406841152262 chr5 144767833 144769070 + 4.07406841152262 NA promoter-TSS (NM_001081362) promoter-TSS (NM_001081362) -341 NM_001081362 100683 Mm.273570 NM_001081362 ENSMUSG00000045482 Trrap AI481500 transformation/transcription domain-associated protein protein-coding common_peak1_38_333_-0.510760842866191_8.12832387104096_4.07388353644131 chr10 99599737 99600200 + 4.07388353644131 NA Intergenic IAPLTR2_Mm|LTR|ERVK -9203 NR_038019 100504202 Mm.403801 NR_038019 Gm20110 - predicted gene, 20110 ncRNA common_peak1_79_715_-0.339456927260768_9.31408731363387_4.07293917861506 chrX 73228098 73229110 + 4.07293917861506 NA exon (NM_007978, exon 1 of 1) exon (NM_007978, exon 1 of 1) 298 NM_007978 14070 Mm.165807 NM_007978 ENSMUSG00000078317 F8a AI852759|DXUcsf1|F8a1 factor 8-associated gene A protein-coding common_peak2_266_2197_0.17517721396824_11.1895642779334_4.07292722543028 chr7 126582764 126586015 + 4.07292722543028 NA promoter-TSS (NM_138310) promoter-TSS (NM_138310) -109 NM_001146311 12752 Mm.268930 NM_009907 ENSMUSG00000030720 Cln3 AI323623 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) protein-coding common_peak2_112_1046_-0.276526228758408_9.8937826125516_4.07260579216524 chr16 22008655 22010436 + 4.07260579216524 NA promoter-TSS (NR_027488) promoter-TSS (NR_027488) 61 NR_027488 75826 Mm.297431 NM_029457 ENSMUSG00000022855 Senp2 2310007L05Rik|4930538C18Rik|AI646780|AW554757|Smt3ip2|SuPr-1|mKIAA1331 SUMO/sentrin specific peptidase 2 protein-coding common_peak1_125_1182_-0.26001288720165_10.078227914739_4.07221666424042 chr10 39401520 39403776 + 4.07221666424042 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 32849 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_65_331_0.428892827500311_8.58948584509708_4.07076894400194 chr15 97816777 97818273 + 4.07076894400194 NA intron (NM_001204275, intron 1 of 24) intron (NM_001204275, intron 1 of 24) -2662 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_55_261_0.479754059666831_8.27330003137087_4.07034263349193 chr5 143269309 143270556 + 4.07034263349193 NA promoter-TSS (NM_017467) promoter-TSS (NM_017467) 90 NM_017467 54201 Mm.6666 NM_017467 ENSMUSG00000046658 Zfp316 Emzf1|Mzf3|Znf316 zinc finger protein 316 protein-coding common_peak2_55_261_0.479754059666831_8.27330003137087_4.07034263349193-2 chr6 51544174 51546012 + 4.07034263349193 NA intron (NM_028035, intron 1 of 6) C-rich|Low_complexity|Low_complexity 570 NM_001127348 71982 Mm.294166 NM_028035 ENSMUSG00000038301 Snx10 2410004M09Rik sorting nexin 10 protein-coding common_peak2_204_1554_0.206849986925782_10.7061238584809_4.0702258230069 chr7 16923164 16925112 + 4.0702258230069 NA promoter-TSS (NM_007590) promoter-TSS (NM_007590) -106 NM_007590 12315 Mm.288630 NM_007590 ENSMUSG00000019370 Calm3 CaMA|R75142 calmodulin 3 protein-coding common_peak1_46_405_-0.462204829759159_8.4342335023056_4.07017806596993 chr5 76974493 76975280 + 4.07017806596993 NA intron (NM_025691, intron 1 of 18) CpG 185 NM_025691 66661 Mm.296976 NM_025691 ENSMUSG00000036323 Srp72 5730576P14Rik|72kDa|AI132477|BC019196|C77589 signal recognition particle 72 protein-coding common_peak1_104_633_0.317241200537412_9.46695963040811_4.07009156600671 chr13 95324552 95325794 + 4.07009156600671 NA 5' UTR (NM_028106, exon 1 of 2) 5' UTR (NM_028106, exon 1 of 2) 348 NM_028106 72114 Mm.3774 NM_028106 ENSMUSG00000041995 Zbed3 0610037K01Rik|2610005H11Rik|AU018975|AU024588 zinc finger, BED type containing 3 protein-coding common_peak1_377_4174_-0.135204494957357_11.9599582347701_4.06991260760789 chr13 23737966 23740926 + 4.06991260760789 NA TTS (NM_015786) TTS (NM_015786) 639 NM_015786 50708 Mm.193539 NM_015786 ENSMUSG00000036181 Hist1h1c 0610008C09Rik|H1.2|H1c|H1f2|H1var1|His1a histone cluster 1, H1c protein-coding common_peak2_133_1266_-0.25004479780473_10.1821784102384_4.06931398462646 chr15 27783092 27786082 + 4.06931398462646 NA intron (NM_001081302, intron 34 of 56) intron (NM_001081302, intron 34 of 56) -103045 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_152_1054_0.248778009686193_10.1674162884376_4.06913786797844 chr13 93898684 93900830 + 4.06913786797844 NA intron (NM_009712, intron 6 of 7) MLT1A1|LTR|ERVL-MaLR 108980 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak2_101_608_0.32398467040748_9.41229075311007_4.06801140963893 chr16 33966129 33967692 + 4.06801140963893 NA promoter-TSS (NM_009471) promoter-TSS (NM_009471) 93 NM_009471 22247 Mm.13145 NM_009471 ENSMUSG00000022814 Umps 1700095D23Rik|AA408257|AL033308|BB164745 uridine monophosphate synthetase protein-coding common_peak1_28_247_-0.605532995874307_7.65142981244972_4.06467393578717 chr13 23551299 23551829 + 4.06467393578717 NA promoter-TSS (NM_175655) promoter-TSS (NM_175655) 79 NM_175655 319157 Mm.442307 NM_175655 ENSMUSG00000069274 Hist1h4f - histone cluster 1, H4f protein-coding common_peak1_28_247_-0.605532995874307_7.65142981244972_4.06467393578717-2 chr5 64389642 64390283 + 4.06467393578717 NA Intergenic Intergenic 77980 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA common_peak2_66_338_0.42540223701338_8.61784258164303_4.06320918717468 chr11 6274161 6275680 + 4.06320918717468 NA promoter-TSS (NM_134020) promoter-TSS (NM_134020) -83 NM_134020 103694 Mm.254495 NM_134020 ENSMUSG00000004394 Tmed4 1110014L17Rik|AI326346 transmembrane p24 trafficking protein 4 protein-coding common_peak2_174_1713_-0.213600092710646_10.6363513477572_4.06249027677029 chr6 97178129 97180109 + 4.06249027677029 NA promoter-TSS (NM_001081111) promoter-TSS (NM_001081111) 5 NM_001081111 232286 Mm.30893 NM_001081111 ENSMUSG00000030059 Tmf1 7030402D04Rik|Gm153|Tmf1` TATA element modulatory factor 1 protein-coding common_peak1_119_760_0.290128411466871_9.71681684923698_4.06239534270699 chr11 26592921 26594878 + 4.06239534270699 NA promoter-TSS (NM_027260) promoter-TSS (NM_027260) 21 NM_027260 69922 Mm.285351 NM_027260 ENSMUSG00000064090 Vrk2 2810003O05Rik|AI447698 vaccinia related kinase 2 protein-coding common_peak2_93_544_0.339630978948087_9.25992790913833_4.06081162315939-2 chr8 31111045 31112837 + 4.06081162315939 NA promoter-TSS (NM_175136) promoter-TSS (NM_175136) 95 NM_175136 68867 Mm.29532 NM_175136 ENSMUSG00000039328 Rnf122 1110063C11Rik ring finger protein 122 protein-coding common_peak2_93_544_0.339630978948087_9.25992790913833_4.06081162315939 chr14 122200158 122202336 + 4.06081162315939 NA intron (NM_029556, intron 1 of 7) intron (NM_029556, intron 1 of 7) 19553 NM_029556 69634 Mm.34608 NM_029556 ENSMUSG00000025545 Clybl 0610033J05Rik|2310014M14Rik|AI256068|Clb citrate lyase beta like protein-coding unique_peak2_9_92_-1.07463689466361_6.00184036377622_4.06021574879918 chr6 4363326 4364044 + 4.06021574879918 NA Intergenic IAPEz-int|LTR|ERVK -142012 NM_007743 12843 Mm.277792 NM_007743 ENSMUSG00000029661 Col1a2 AA960264|AI325291|Col1a-2|Cola-2|Cola2|oim collagen, type I, alpha 2 protein-coding common_peak2_9_92_-1.07463689466361_6.00184036377622_4.06021574879918 chr17 4980123 4980793 + 4.06021574879918 NA Intergenic ORR1D2|LTR|ERVL-MaLR -14616 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_158_1536_-0.226025168094374_10.4728888656436_4.05988382605781 chr11 43681160 43682963 + 4.05988382605781 NA promoter-TSS (NM_001164231) promoter-TSS (NM_001164231) 63 NM_001164231 70802 Mm.397449 NM_027557 ENSMUSG00000044950 Pwwp2a 4631424J17Rik|AI891583|AU024105|D930040F23Rik PWWP domain containing 2A protein-coding common_peak1_429_4069_0.129631989165016_12.0556290737361_4.05959697175861 chr5 124029913 124033886 + 4.05959697175861 NA intron (NM_177876, intron 1 of 3) intron (NM_177876, intron 1 of 3) 361 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_17_156_-0.78993538701896_6.89965305538215_4.05949551404544-2 chr10 68445779 68446230 + 4.05949551404544 NA intron (NM_028491, intron 5 of 7) intron (NM_028491, intron 5 of 7) 95871 NM_028491 73287 Mm.141830 NM_028491 ENSMUSG00000019945 1700040L02Rik - RIKEN cDNA 1700040L02 gene protein-coding unique_peak2_17_156_-0.78993538701896_6.89965305538215_4.05949551404544 chr14 54034379 54035683 + 4.05949551404544 NA Intergenic Intergenic 218898 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_17_156_-0.78993538701896_6.89965305538215_4.05949551404544-4 chr5 114783396 114783863 + 4.05949551404544 NA intron (NM_026718, intron 1 of 14) MTE2a|LTR|ERVL-MaLR 8489 NM_026718 68420 Mm.275554 NM_026718 ENSMUSG00000041870 Ankrd13a 1100001D10Rik|ANKRD13|AU046136 ankyrin repeat domain 13a protein-coding common_peak1_27_91_0.763002793960912_6.90506335303747_4.05949551404544 chr17 3273533 3273997 + 4.05949551404544 NA Intergenic Intergenic -52808 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding unique_peak2_17_156_-0.78993538701896_6.89965305538215_4.05949551404544-2 chrX 50596651 50597917 + 4.05949551404544 NA intron (NR_015505, intron 10 of 19) intron (NR_015505, intron 10 of 19) 38037 NR_015505 103012 Mm.482523 NR_015505 ENSMUSG00000085396 Firre 5830467J12Rik|6720401G13Rik|AW048145 functional intergenic repeating RNA element ncRNA common_peak1_17_156_-0.78993538701896_6.89965305538215_4.05949551404544 chr10 67285472 67285872 + 4.05949551404544 NA promoter-TSS (NM_001036293) promoter-TSS (NM_001036293) -391 NM_001036293 641340 Mm.136223 NM_001036293 ENSMUSG00000075000 Nrbf2 NRBF-2 nuclear receptor binding factor 2 protein-coding common_peak1_17_156_-0.78993538701896_6.89965305538215_4.05949551404544-3 chr4 140867571 140868056 + 4.05949551404544 NA Intergenic Intergenic -4880 NR_040654 75128 Mm.67085 NR_040654 ENSMUSG00000087045 4930515B02Rik - RIKEN cDNA 4930515B02 gene ncRNA common_peak1_27_91_0.763002793960912_6.90506335303747_4.05949551404544-2 chr9 22304567 22305209 + 4.05949551404544 NA intron (NM_145612, intron 2 of 7) B1_Mur1|SINE|Alu 2750 NM_145612 235050 Mm.306038 NM_145612 ENSMUSG00000066829 Zfp810 BC005471 zinc finger protein 810 protein-coding common_peak1_17_156_-0.78993538701896_6.89965305538215_4.05949551404544-5 chr9 60997993 60998357 + 4.05949551404544 NA Intergenic Intergenic -18894 NR_040767 330956 Mm.207985 NR_040767 ENSMUSG00000111290 Gm5122 A430102L10 predicted gene 5122 ncRNA common_peak1_60_296_0.450200330246206_8.43941928592387_4.05935034244209 chr10 120227006 120227763 + 4.05935034244209 NA intron (NM_025431, intron 1 of 2) CpG 324 NM_025431 66225 Mm.291755 NM_025431 ENSMUSG00000020224 Llph 1190005P17Rik LLP homolog, long-term synaptic facilitation (Aplysia) protein-coding common_peak1_60_296_0.450200330246206_8.43941928592387_4.05935034244209-2 chr4 123235696 123236900 + 4.05935034244209 NA intron (NM_013905, intron 1 of 4) intron (NM_013905, intron 1 of 4) 2742 NM_013905 56198 Mm.103615 NM_013905 ENSMUSG00000032744 Heyl Hey3|Hrt3|bHLHb33|hesr3 hairy/enhancer-of-split related with YRPW motif-like protein-coding common_peak2_75_404_0.391810727997616_8.8576834617708_4.05848197462675 chr13 37832622 37834620 + 4.05848197462675 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) 6228 NM_001039188 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_47_413_-0.453099178220873_8.46693736838889_4.05812511479085 chr9 50852736 50853542 + 4.05812511479085 NA Intergenic Intergenic -3785 NM_001034085 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak1_105_974_-0.286904332007504_9.78580624263322_4.05792475912629 chr11 101442343 101443248 + 4.05792475912629 NA exon (NM_011289, exon 2 of 5) exon (NM_011289, exon 2 of 5) 550 NM_011289 19942 Mm.340658 NM_011289 ENSMUSG00000063316 Rpl27 - ribosomal protein L27 protein-coding common_peak1_128_838_0.277334685967409_9.85119434342353_4.05760830772666 chr15 102459097 102460356 + 4.05760830772666 NA intron (NM_025385, intron 2 of 4) B1_Mm|SINE|Alu 556 NM_025385 66151 Mm.393955 NM_025385 ENSMUSG00000023048 Prr13 1110020C13Rik|2010324E22Rik proline rich 13 protein-coding common_peak2_210_1614_0.203280889557675_10.7589588943601_4.05717612743905 chr9 20606796 20608107 + 4.05717612743905 NA promoter-TSS (NR_033729) promoter-TSS (NR_033729) -24 NR_033729 66662 Mm.477847 NM_175110 ENSMUSG00000062470 Fbxl12os 5730577I03Rik F-box and leucine-rich repeat protein 12, opposite strand pseudo common_peak1_178_1758_-0.210995182049192_10.6750421764474_4.05664862459262 chr3 35931151 35933552 + 4.05664862459262 NA promoter-TSS (NM_001205362) promoter-TSS (NM_001205362) -17 NM_001205362 114893 Mm.374810 NM_033623 ENSMUSG00000027708 Dcun1d1 Rp42|SCCRO|Tes3|pTes3 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) protein-coding common_peak1_235_1870_0.189157184173755_10.9641724353277_4.05588434472762 chr10 17947043 17948792 + 4.05588434472762 NA 5' UTR (NM_001033432, exon 1 of 4) 5' UTR (NM_001033432, exon 1 of 4) 150 NM_001033432 380629 Mm.276430 NM_001033432 ENSMUSG00000039879 Heca Gm869|HDC|HDCL hdc homolog, cell cycle regulator protein-coding common_peak1_44_386_-0.470011118579778_8.36118419685452_4.05585530227827 chr7 125707101 125707794 + 4.05585530227827 NA promoter-TSS (NM_001081022) promoter-TSS (NM_001081022) 241 NM_207239 233863 Mm.294173 NM_207239 ENSMUSG00000032777 Gtf3c1 - general transcription factor III C 1 protein-coding common_peak1_173_1702_-0.214452577826334_10.6266364307654_4.0552684957916 chr19 11053161 11054738 + 4.0552684957916 NA Intergenic Lx|LINE|L1 -3383 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA common_peak2_48_215_0.521988734747216_8.01588186953708_4.05453740160638 chr6 135064878 135066333 + 4.05453740160638 NA promoter-TSS (NM_181444) promoter-TSS (NM_181444) -57 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding common_peak2_101_933_-0.292995651395849_9.72078091401174_4.05348861859609 chr17 84844453 84846589 + 4.05348861859609 NA Intergenic Intergenic -54735 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak2_103_954_-0.290711055909467_9.75400139496838_4.0530831133913 chr12 4081794 4083763 + 4.0530831133913 NA 5' UTR (NM_153082, exon 1 of 7) 5' UTR (NM_153082, exon 1 of 7) 204 NM_153082 217378 Mm.271656 NM_153082 ENSMUSG00000020657 Dnajc27 AI639580|C330021A05Rik|Rabj|Rbj DnaJ heat shock protein family (Hsp40) member C27 protein-coding common_peak1_56_268_0.47303635699355_8.3079805410534_4.05277935907002 chr1 127239367 127240563 + 4.05277935907002 NA intron (NM_145128, intron 1 of 17) intron (NM_145128, intron 1 of 17) 34979 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_56_268_0.47303635699355_8.3079805410534_4.05277935907002-2 chr5 73210059 73211393 + 4.05277935907002 NA intron (NM_028194, intron 2 of 62) intron (NM_028194, intron 2 of 62) 45892 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_73_656_-0.353353597924563_9.18307276136005_4.05262847351738 chr11 11725692 11726801 + 4.05262847351738 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 36069 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_30_264_-0.583166344716256_7.75826537709243_4.05254496783811 chr1 86212313 86212922 + 4.05254496783811 NA intron (NM_001310702, intron 18 of 24) intron (NM_001310702, intron 18 of 24) 57837 NM_001310702 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding common_peak1_42_177_0.569993739287553_7.76073030061017_4.05254496783811 chr2 163711593 163712500 + 4.05254496783811 NA intron (NM_001277096, intron 2 of 3) intron (NM_001277096, intron 2 of 3) 18009 NM_011106 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak1_30_264_-0.583166344716256_7.75826537709243_4.05254496783811-3 chr18 67441304 67441892 + 4.05254496783811 NA intron (NM_027130, intron 3 of 16) intron (NM_027130, intron 3 of 16) 7538 NM_027130 69597 Mm.426052 NM_027130 ENSMUSG00000024527 Afg3l2 2310036I02Rik|AW260507|Emv66|par AFG3-like AAA ATPase 2 protein-coding common_peak1_30_264_-0.583166344716256_7.75826537709243_4.05254496783811-2 chr13 14612585 14613060 + 4.05254496783811 NA promoter-TSS (NM_008944) promoter-TSS (NM_008944) 215 NM_029271 75398 Mm.36511 NM_029271 ENSMUSG00000015672 Mrpl32 0610033O15Rik mitochondrial ribosomal protein L32 protein-coding common_peak1_59_524_-0.400904868769425_8.83572117816877_4.05183385120859 chr14 118937087 118937905 + 4.05183385120859 NA promoter-TSS (NM_008929) promoter-TSS (NM_008929) -436 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding common_peak2_59_524_-0.400904868769425_8.83572117816877_4.05183385120859 chrX 107249771 107252422 + 4.05183385120859 NA Intergenic Intergenic -4782 NM_001177781 213439 Mm.383562 NM_001033251 ENSMUSG00000073008 Gpr174 Gm376|Lypsr3 G protein-coupled receptor 174 protein-coding common_peak1_13_124_-0.905831845830517_6.51286836174683_4.05168676424096 chr4 130662821 130663192 + 4.05168676424096 NA promoter-TSS (NM_030722) promoter-TSS (NM_030722) -353 NM_030722 80912 Mm.440206 NM_030722 ENSMUSG00000028580 Pum1 AA517475|Pumm|mKIAA0099 pumilio RNA-binding family member 1 protein-coding common_peak1_22_197_-0.690895815986099_7.28390871208656_4.05081080664787 chr4 62686646 62687135 + 4.05081080664787 NA intron (NM_001310706, intron 1 of 6) intron (NM_001310706, intron 1 of 6) 12916 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_52_241_0.496878528168518_8.16730250135885_4.05066090285093 chr14 57716239 57717424 + 4.05066090285093 NA intron (NM_015771, intron 2 of 7) intron (NM_015771, intron 2 of 7) 17587 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak2_52_241_0.496878528168518_8.16730250135885_4.05066090285093 chr8 116587079 116588344 + 4.05066090285093 NA intron (NM_029441, intron 4 of 6) intron (NM_029441, intron 4 of 6) 82696 NM_029297 75465 Mm.23114 NM_029297 ENSMUSG00000034467 Dynlrb2 1700009A04Rik|DNLC2B|Dncl2b dynein light chain roadblock-type 2 protein-coding common_peak2_155_1082_0.245350544372247_10.2034927997945_4.05051083267631 chr1 180354989 180358532 + 4.05051083267631 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -26211 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_32_281_-0.562231404737914_7.85843565002984_4.05041363141718 chr9 118059544 118060194 + 4.05041363141718 NA 3' UTR (NM_001048146, exon 7 of 7) 3' UTR (NM_001048146, exon 7 of 7) 19347 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding unique_peak2_32_281_-0.562231404737914_7.85843565002984_4.05041363141718 chr5 24447116 24448460 + 4.05041363141718 NA promoter-TSS (NM_022418) promoter-TSS (NM_022418) 58 NM_022418 64295 Mm.150098 NM_022418 ENSMUSG00000028958 Tmub1 2010004O20Rik|AB030183|Hops transmembrane and ubiquitin-like domain containing 1 protein-coding common_peak1_55_486_-0.41460090087806_8.72047751164331_4.0496230618155 chr18 10029142 10030096 + 4.0496230618155 NA intron (NM_001038589, intron 1 of 14) intron (NM_001038589, intron 1 of 14) 530 NM_021522 59025 Mm.329277 NM_021522 ENSMUSG00000047879 Usp14 2610005K12Rik|2610037B11Rik|AW107924|C78769|ax|nmf375 ubiquitin specific peptidase 14 protein-coding common_peak2_76_412_0.38672356935362_8.88335975609626_4.04949431580939 chr10 128704217 128705542 + 4.04949431580939 NA 5' UTR (NM_016756, exon 1 of 7) 5' UTR (NM_016756, exon 1 of 7) 172 NM_183417 12566 Mm.111326 NM_016756 ENSMUSG00000025358 Cdk2 A630093N05Rik cyclin-dependent kinase 2 protein-coding common_peak1_91_833_-0.31221814697844_9.54779449995544_4.04817873953778 chr9 90246879 90248262 + 4.04817873953778 NA intron (NM_194334, intron 2 of 12) intron (NM_194334, intron 2 of 12) 23199 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak2_244_1964_0.184668226643037_11.0326477104675_4.04746013291818 chr8 95330723 95333018 + 4.04746013291818 NA promoter-TSS (NM_133954) promoter-TSS (NM_133954) 80 NM_024467 79233 Mm.350514 NM_024467 ENSMUSG00000046556 Zfp319 AI225750|AI413472|Znf319|mKIAA1388 zinc finger protein 319 protein-coding common_peak1_67_346_0.417969030768623_8.64777636796257_4.0471343515481 chr6 91473424 91474288 + 4.0471343515481 NA promoter-TSS (NM_133928) promoter-TSS (NM_133928) 105 NM_028766 74122 Mm.38801 NM_028766 ENSMUSG00000030095 Tmem43 1200015A22Rik|LUMA transmembrane protein 43 protein-coding common_peak2_94_863_-0.306417711888257_9.60167864621934_4.04697762777766 chr18 84950815 84952311 + 4.04697762777766 NA promoter-TSS (NM_025969) promoter-TSS (NM_025969) -39 NM_025969 67105 Mm.250617 NM_025969 ENSMUSG00000024645 Timm21 1700034H14Rik|2700002I20Rik tranlocase of inner mitochondrial membrane 21 protein-coding common_peak1_16_148_-0.815632259487989_6.81135239071817_4.04643195047778 chr9 124114359 124114768 + 4.04643195047778 NA Intergenic RLTR22_Mur|LTR|ERVK -6980 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak2_45_196_0.543021295823489_7.89356246736812_4.04634809691175 chr4 32287690 32288926 + 4.04634809691175 NA Intergenic Intergenic -129127 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_37_147_0.617523148954296_7.5182149401061_4.04578694183402 chr1 183220829 183221707 + 4.04578694183402 NA intron (NM_026866, intron 1 of 9) CpG 261 NM_001278218 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding common_peak1_37_147_0.617523148954296_7.5182149401061_4.04578694183402 chr7 24547173 24547539 + 4.04578694183402 NA exon (NM_009532, exon 1 of 17) exon (NM_009532, exon 1 of 17) 206 NM_009532 22594 Mm.4347 NM_009532 ENSMUSG00000051768 Xrcc1 Xrcc-1 X-ray repair complementing defective repair in Chinese hamster cells 1 protein-coding common_peak2_37_147_0.617523148954296_7.5182149401061_4.04578694183402-2 chr14 66213120 66214397 + 4.04578694183402 NA promoter-TSS (NM_001162366) promoter-TSS (NM_001162366) -206 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_201_1525_0.207921257957281_10.6794998758132_4.04520638078974 chr19 53943417 53944649 + 4.04520638078974 NA promoter-TSS (NM_001168505) promoter-TSS (NM_001168505) -273 NM_001168505 56392 Mm.228669 NM_019658 ENSMUSG00000024976 Shoc2 AU017287|Sur8|mKIAA0862 soc-2 (suppressor of clear) homolog (C. elegans) protein-coding common_peak1_184_1357_0.220621473844998_10.5175785011672_4.0451070927023 chr17 34024109 34025443 + 4.0451070927023 NA promoter-TSS (NM_009066) promoter-TSS (NM_009066) -96 NM_009066 19763 Mm.20343 NM_009066 ENSMUSG00000024325 Ring1 Ring1A ring finger protein 1 protein-coding common_peak1_25_222_-0.645478655279373_7.47816057228062_4.04349657194937-2 chr6 124828406 124828931 + 4.04349657194937 NA intron (NM_013700, intron 1 of 19) intron (NM_013700, intron 1 of 19) 779 NM_013700 22225 Mm.3571 NM_013700 ENSMUSG00000038429 Usp5 AA407472|ISOT|ISOT-1|Ucht ubiquitin specific peptidase 5 (isopeptidase T) protein-coding common_peak1_25_222_-0.645478655279373_7.47816057228062_4.04349657194937 chr13 37622610 37623087 + 4.04349657194937 NA Intergenic Intergenic -203190 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_25_222_-0.645478655279373_7.47816057228062_4.04349657194937-3 chr7 131560296 131560728 + 4.04349657194937 NA intron (NM_009774, intron 1 of 7) CpG 121 NM_009774 12237 Mm.927 NM_009774 ENSMUSG00000066979 Bub3 AU019800|AU021329|AU043350|AW146323|C78067 BUB3 mitotic checkpoint protein protein-coding common_peak2_171_1679_-0.21529372503946_10.6065986551464_4.04334805271621 chr19 3574620 3576835 + 4.04334805271621 NA promoter-TSS (NM_029456) promoter-TSS (NM_029456) 22 NM_001164159 52036 Mm.284686 NM_028999 ENSMUSG00000024908 Ppp6r3 4930528G08Rik|9130026N02Rik|D19Bwg1430e|D19Ertd703e|Pp6r3|Ppcs3|Pptcs3|Sapl|Saps3|mKIAA1558 protein phosphatase 6, regulatory subunit 3 protein-coding common_peak1_116_1087_-0.270384875489194_9.95227040350574_4.04291902145431 chr6 122601885 122603230 + 4.04291902145431 NA promoter-TSS (NM_031159) promoter-TSS (NM_031159) -113 NM_001134391 11810 Mm.3333 NM_031159 ENSMUSG00000040613 Apobec1 Cdar1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 protein-coding common_peak1_116_1087_-0.270384875489194_9.95227040350574_4.04291902145431-2 chr7 16098466 16099505 + 4.04291902145431 NA intron (NM_025898, intron 1 of 10) CpG 342 NM_025898 108124 Mm.104540 NM_025898 ENSMUSG00000006024 Napa 1500039N14Rik|AW209189|RA81|SNAPA|SNARE|a-SNAP|hyh N-ethylmaleimide sensitive fusion protein attachment protein alpha protein-coding common_peak2_113_709_0.299435816344486_9.62139312256429_4.04239777189882 chr7 122132329 122133936 + 4.04239777189882 NA promoter-TSS (NM_001081238) promoter-TSS (NM_001081238) 91 NM_021608 59288 Mm.478285 NM_021608 ENSMUSG00000030868 Dctn5 4930427E12Rik|C78178|b2b315Clo dynactin 5 protein-coding common_peak1_35_135_0.643834831808684_7.40938025715468_4.04237200235333 chr15 38446686 38447418 + 4.04237200235333 NA Intergenic MTEb|LTR|ERVL-MaLR 43495 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak1_68_353_0.414989770163798_8.6751004351649_4.04136322195122 chrX 150587703 150588854 + 4.04136322195122 NA promoter-TSS (NM_029943) promoter-TSS (NM_029943) -123 NM_029943 77622 Mm.440275 NM_029943 ENSMUSG00000025269 Apex2 C430040P13Rik|ape2 apurinic/apyrimidinic endonuclease 2 protein-coding unique_peak2_14_132_-0.873238314089842_6.61866327845627_4.04096529831588 chr4 127020498 127021155 + 4.04096529831588 NA promoter-TSS (NM_023603) promoter-TSS (NM_023603) -475 NR_045010 71514 Mm.257276 NM_023603 ENSMUSG00000028820 Sfpq 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|OTTMUSG00000009329|PSF|REP1 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) protein-coding common_peak1_14_132_-0.873238314089842_6.61866327845627_4.04096529831588 chr16 49791802 49792186 + 4.04096529831588 NA Intergenic Intergenic -63660 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_14_132_-0.873238314089842_6.61866327845627_4.04096529831588-2 chr2 26493007 26493323 + 4.04096529831588 NA intron (NM_008714, intron 2 of 33) intron (NM_008714, intron 2 of 33) 10657 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak1_260_2711_-0.168209116317207_11.3210369049777_4.04055712718007 chr15 84923345 84924871 + 4.04055712718007 NA intron (NM_016714, intron 1 of 7) (CA)n|Simple_repeat|Simple_repeat 680 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak2_147_1008_0.254297814477766_10.1058593663452_4.04040662340629 chr8 84236195 84237950 + 4.04040662340629 NA promoter-TSS (NM_172503) promoter-TSS (NM_172503) -30 NM_172503 212168 Mm.117094 NM_172503 ENSMUSG00000035671 Zswim4 D330002I24|E130119J17Rik zinc finger SWIM-type containing 4 protein-coding unique_peak2_15_140_-0.843298089273626_6.71790230776198_4.03980310298807-2 chr8 3467060 3467827 + 4.03980310298807 NA intron (NM_026951, intron 1 of 4) B4|SINE|B4 205 NM_026951 69129 Mm.45279 NM_026951 ENSMUSG00000069633 Pex11g 1810022F11Rik|1810049N02Rik|Pex11c|Pex11gamma peroxisomal biogenesis factor 11 gamma protein-coding unique_peak2_15_140_-0.843298089273626_6.71790230776198_4.03980310298807 chr5 122731956 122732831 + 4.03980310298807 NA 3' UTR (NM_001199676, exon 17 of 17) 3' UTR (NM_001199676, exon 17 of 17) 24849 NM_011026 18438 Mm.290884 NM_011026 ENSMUSG00000029470 P2rx4 AI504491|AW555605|D5Ertd444e|P2X4 purinergic receptor P2X, ligand-gated ion channel 4 protein-coding common_peak1_21_188_-0.702444681527122_7.21102008345751_4.03938167234743 chr11 116376456 116376926 + 4.03938167234743 NA intron (NM_027258, intron 2 of 18) B2_Mm2|SINE|B2 36341 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_24_76_0.819228651441483_6.67640086641564_4.03931111122242-2 chr15 66791222 66791883 + 4.03931111122242 NA intron (NM_001029841, intron 4 of 7) MIRc|SINE|MIR 40277 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_24_76_0.819228651441483_6.67640086641564_4.03931111122242 chr11 53979446 53980336 + 4.03931111122242 NA 5' UTR (NM_019723, exon 1 of 10) 5' UTR (NM_019723, exon 1 of 10) 136 NM_019723 56517 Mm.154284 NM_019723 ENSMUSG00000063652 Slc22a21 Octn3|Slc22a9 solute carrier family 22 (organic cation transporter), member 21 protein-coding common_peak1_24_76_0.819228651441483_6.67640086641564_4.03931111122242-3 chr17 47922396 47922920 + 4.03931111122242 NA intron (NM_001110824, intron 1 of 16) CpG 1974 NM_028767 74123 Mm.240062 NM_028767 ENSMUSG00000023991 Foxp4 1200010K03Rik|2310007G05Rik|mFKHLA forkhead box P4 protein-coding common_peak1_24_76_0.819228651441483_6.67640086641564_4.03931111122242-4 chr9 99090120 99090800 + 4.03931111122242 NA intron (NM_029094, intron 6 of 23) intron (NM_029094, intron 6 of 23) 49751 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak1_24_76_0.819228651441483_6.67640086641564_4.03931111122242 chr1 91350235 91350881 + 4.03931111122242 NA promoter-TSS (NM_027551) promoter-TSS (NM_027551) -515 NM_027551 70788 Mm.68617 NM_027551 ENSMUSG00000026308 Klhl30 4631423F02Rik kelch-like 30 protein-coding common_peak2_24_76_0.819228651441483_6.67640086641564_4.03931111122242-2 chr4 86873665 86874345 + 4.03931111122242 NA promoter-TSS (NM_139306) promoter-TSS (NM_139306) -409 NM_001290543 230379 Mm.45019 NM_139306 ENSMUSG00000038007 Acer2 2410116I05Rik|Asah3l|CRG-L1|maCER2 alkaline ceramidase 2 protein-coding common_peak1_208_1595_0.203500680302398_10.7419952763735_4.03917629973538 chr9 20606868 20607990 + 4.03917629973538 NA promoter-TSS (NR_033729) promoter-TSS (NR_033729) -46 NR_033729 66662 Mm.477847 NM_175110 ENSMUSG00000062470 Fbxl12os 5730577I03Rik F-box and leucine-rich repeat protein 12, opposite strand pseudo common_peak1_115_1077_-0.272253525867225_9.93801469981889_4.03832115476662 chr5 33018832 33019902 + 4.03832115476662 NA intron (NM_011738, intron 1 of 1) CpG 551 NM_011738 22629 Mm.332314 NM_011738 ENSMUSG00000018965 Ywhah - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide protein-coding common_peak2_169_1213_0.232701452783166_10.3619034326473_4.03823259895006 chrX 73785809 73788091 + 4.03823259895006 NA promoter-TSS (NM_008323) promoter-TSS (NM_008323) -53 NM_008323 15929 Mm.14825 NM_008323 ENSMUSG00000002010 Idh3g - isocitrate dehydrogenase 3 (NAD+), gamma protein-coding common_peak2_148_1426_-0.233844617368142_10.3618473107917_4.03823259895006 chr10 58497016 58498945 + 4.03823259895006 NA promoter-TSS (NM_001162956) promoter-TSS (NM_001162956) 43 NM_001162956 76138 Mm.211744 NM_001162956 ENSMUSG00000038010 Ccdc138 6230424H07Rik|BC042726 coiled-coil domain containing 138 protein-coding common_peak2_134_1276_-0.248229655984808_10.1944279817103_4.03717831489039 chr8 11757405 11759261 + 4.03717831489039 NA promoter-TSS (NM_001113518) promoter-TSS (NM_001113518) 3 NM_001113518 54126 Mm.244068 NM_017402 ENSMUSG00000031511 Arhgef7 Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR Rho guanine nucleotide exchange factor (GEF7) protein-coding common_peak2_48_422_-0.447637616209265_8.50069504501532_4.03685488140631 chr17 31511511 31512958 + 4.03685488140631 NA exon (NM_021322, exon 1 of 11) exon (NM_021322, exon 1 of 11) 253 NM_021322 57773 Mm.143771 NM_021322 ENSMUSG00000024037 Wdr4 AI415180|AI448349|D530049K22Rik WD repeat domain 4 protein-coding common_peak1_48_422_-0.447637616209265_8.50069504501532_4.03685488140631 chr9 21181497 21182373 + 4.03685488140631 NA intron (NR_106127, intron 1 of 3) intron (NR_106127, intron 1 of 3) -2166 NM_001310750 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding common_peak1_76_685_-0.345343225399747_9.24939315347294_4.03673780258057 chr10 42839041 42840298 + 4.03673780258057 NA Intergenic L1M5|LINE|L1 -20843 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak2_57_275_0.466751168920757_8.34190004123855_4.03669505653594 chr6 29164006 29165186 + 4.03669505653594 NA exon (NM_133925, exon 1 of 19) exon (NM_133925, exon 1 of 19) 128 NM_133925 68272 Mm.40802 NM_026650 ENSMUSG00000029701 Rbm28 2810480G15Rik|AI503051 RNA binding motif protein 28 protein-coding common_peak2_424_4009_0.130360913388529_12.0345669780365_4.0360586231733 chr13 46724111 46729207 + 4.0360586231733 NA intron (NM_175749, intron 1 of 21) intron (NM_175749, intron 1 of 21) 1190 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak1_42_368_-0.481749835806445_8.28660208815717_4.03422774632253 chr9 107635626 107636354 + 4.03422774632253 NA promoter-TSS (NM_008138) promoter-TSS (NM_008138) -648 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak2_42_368_-0.481749835806445_8.28660208815717_4.03422774632253 chr12 21459176 21460756 + 4.03422774632253 NA Intergenic ID|SINE|ID -42530 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak2_67_599_-0.372057807148998_9.04278978692138_4.03406478687358 chr11 3408208 3410011 + 4.03406478687358 NA 5' UTR (NM_010718, exon 1 of 16) 5' UTR (NM_010718, exon 1 of 16) 129 NM_010718 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding common_peak2_61_542_-0.391513871883699_8.88905145186251_4.03371536233619 chr16 20535461 20536408 + 4.03371536233619 NA intron (NM_001302970, intron 1 of 10) intron (NM_001302970, intron 1 of 10) 454 NM_009679 11773 Mm.18946 NM_009679 ENSMUSG00000022841 Ap2m1 - adaptor-related protein complex 2, mu 1 subunit protein-coding common_peak2_211_1625_0.201854845740797_10.7680389649454_4.03349331569237 chr8 111939798 111941793 + 4.03349331569237 NA promoter-TSS (NM_026693) promoter-TSS (NM_026693) 92 NM_026693 93739 Mm.371666 NM_026693 ENSMUSG00000031950 Gabarapl2 0610012F20Rik|2900019O08Rik|AI173605|GATE-16|Gef2 gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 protein-coding common_peak2_112_1045_-0.275147638074541_9.89309331720967_4.03317143364857 chr18 24602809 24604787 + 4.03317143364857 NA promoter-TSS (NM_021448) promoter-TSS (NM_021448) 19 NM_139143 106957 Mm.21688 NM_139143 ENSMUSG00000024270 Slc39a6 Ermelin solute carrier family 39 (metal ion transporter), member 6 protein-coding common_peak2_291_2470_0.164664353429556_11.3532114720436_4.03269834009754 chr12 84967578 84971567 + 4.03269834009754 NA intron (NM_178065, intron 1 of 19) intron (NM_178065, intron 1 of 19) 1314 NM_178065 68497 Mm.24446 NM_178065 ENSMUSG00000042350 Arel1 1110018G07Rik|AI649076|AW610792|Kiaa0317|mKIAA0317 apoptosis resistant E3 ubiquitin protein ligase 1 protein-coding common_peak1_29_102_0.722155905414485_7.04757847989046_4.03198107298697 chr7 66167815 66168486 + 4.03198107298697 NA intron (NM_001081163, intron 2 of 2) RSINE1|SINE|B4 58635 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_139_936_0.262765099237059_10.0032877872777_4.03187534781429 chr10 19906913 19907997 + 4.03187534781429 NA intron (NM_001161825, intron 1 of 8) CpG 219 NM_008822 18634 Mm.338363 NM_008822 ENSMUSG00000020003 Pex7 MmPEX7 peroxisomal biogenesis factor 7 protein-coding common_peak1_122_786_0.285357955711223_9.7628988033631_4.0315102828305 chr2 39065017 39066329 + 4.0315102828305 NA promoter-TSS (NR_110968) promoter-TSS (NR_110968) -132 NM_029793 76899 Mm.131098 NM_029793 ENSMUSG00000026754 Golga1 0710001G09Rik|2210418B03Rik|AW107649|Golgi97|awag|golgin-97 golgi autoantigen, golgin subfamily a, 1 protein-coding common_peak1_78_704_-0.339380356172839_9.29178926919974_4.03062610710157 chr8 83715074 83715976 + 4.03062610710157 NA intron (NM_197982, intron 1 of 10) CpG 348 NM_197982 68278 Mm.28222 NM_197982 ENSMUSG00000005481 Ddx39 2610307C23Rik|BAT1|DDXL|Ddx39a|URH49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 protein-coding common_peak2_168_1204_0.232996417412085_10.3513156398234_4.03009238032578 chr7 15921428 15923223 + 4.03009238032578 NA promoter-TSS (NM_009156) promoter-TSS (NM_009156) 46 NM_009156 20364 Mm.42829 NM_009156 ENSMUSG00000041571 Selenow Sepw1|selW selenoprotein W protein-coding common_peak2_53_248_0.48881794595787_8.20441090504702_4.02935257648284 chr10 53750436 53751465 + 4.02935257648284 NA promoter-TSS (NM_001081428) promoter-TSS (NM_001081428) -41 NM_001081428 75906 Mm.436785 NM_001081428 ENSMUSG00000019856 Fam184a 3110012E06Rik|4930438C08Rik|4930589M24Rik family with sequence similarity 184, member A protein-coding common_peak1_108_667_0.308037943055584_9.53772326400184_4.02903850575191 chr9 110458109 110460052 + 4.02903850575191 NA intron (NM_177771, intron 1 of 9) intron (NM_177771, intron 1 of 9) 17614 NM_177771 270201 Mm.41744 NM_177771 ENSMUSG00000054792 Klhl18 A930041K15|AW545966 kelch-like 18 protein-coding common_peak2_439_4192_0.127360837098594_12.0974475333957_4.02890071972669 chr11 45851390 45854477 + 4.02890071972669 NA intron (NM_001045520, intron 1 of 11) intron (NM_001045520, intron 1 of 11) 969 NM_001045520 216705 Mm.169673 NM_001045520 ENSMUSG00000006169 Clint1 AI642036|AW537616|C530049I24Rik|Enth|Epn4|F630206G17Rik|mKIAA0171 clathrin interactor 1 protein-coding common_peak1_37_324_-0.51731939333257_8.08563621124953_4.02847952896505 chrX 48452528 48453054 + 4.02847952896505 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 10341 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak2_40_165_0.586403833718501_7.66824134820618_4.0277951986329 chr5 115312987 115314446 + 4.0277951986329 NA intron (NR_131932, intron 1 of 1) intron (NR_131932, intron 1 of 1) 12596 NR_131932 102639268 Mm.319998 NR_131932 Gm13830 OTTMUSG00000014646 predicted gene 13830 ncRNA common_peak2_33_124_0.66436428749844_7.29796642841131_4.02709454530861-3 chr2 166045294 166046183 + 4.02709454530861 NA intron (NM_008679, intron 2 of 22) intron (NM_008679, intron 2 of 22) 53101 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak2_33_124_0.66436428749844_7.29796642841131_4.02709454530861-2 chr13 4942712 4943484 + 4.02709454530861 NA Intergenic IAPLTR2_Mm|LTR|ERVK -333934 NM_018859 56043 Mm.251908 NM_018859 ENSMUSG00000045410 Akr1e1 1810061I10Rik|Akr1e2 aldo-keto reductase family 1, member E1 protein-coding common_peak1_33_124_0.66436428749844_7.29796642841131_4.02709454530861 chr13 4942756 4943492 + 4.02709454530861 NA Intergenic Intergenic -333960 NM_018859 56043 Mm.251908 NM_018859 ENSMUSG00000045410 Akr1e1 1810061I10Rik|Akr1e2 aldo-keto reductase family 1, member E1 protein-coding common_peak2_33_124_0.66436428749844_7.29796642841131_4.02709454530861 chr11 68546079 68546946 + 4.02709454530861 NA intron (NR_126153, intron 18 of 19) intron (NR_126153, intron 18 of 19) -9674 NM_146004 215723 Mm.131205 NM_146004 ENSMUSG00000048329 Mfsd6l - major facilitator superfamily domain containing 6-like protein-coding common_peak1_214_1656_0.199474869910819_10.7940953221769_4.02639990359713 chr5 27790712 27792404 + 4.02639990359713 NA promoter-TSS (NM_018878) promoter-TSS (NM_018878) -8 NM_018878 55982 Mm.277190 NM_018878 ENSMUSG00000002221 Paxip1 D5Ertd149e|PTIP PAX interacting (with transcription-activation domain) protein 1 protein-coding common_peak2_106_650_0.312456686190139_9.5027420762607_4.02635503177887 chr2 30205144 30206650 + 4.02635503177887 NA promoter-TSS (NM_172404) promoter-TSS (NM_172404) -198 NM_172404 70266 Mm.216089 NM_172404 ENSMUSG00000039648 Kyat1 2010009K05Rik|AI182306|Ccbl1|Gtk|Kat1|KatI kynurenine aminotransferase 1 protein-coding common_peak1_69_617_-0.363405002194485_9.08976052680713_4.02600493838533 chr7 118740341 118741166 + 4.02600493838533 NA exon (NM_027815, exon 1 of 31) exon (NM_027815, exon 1 of 31) 482 NM_027815 71517 Mm.213298 NM_027815 ENSMUSG00000030982 9030624J02Rik 2610029J22Rik RIKEN cDNA 9030624J02 gene protein-coding common_peak2_62_551_-0.386915296826386_8.91506680836498_4.02580746877141 chr3 53016343 53017620 + 4.02580746877141 NA intron (NM_026225, intron 1 of 18) CpG 242 NM_026225 67542 Mm.249548 NM_026225 ENSMUSG00000027742 Cog6 4933405E16Rik|AU018618|mKIAA1134 component of oligomeric golgi complex 6 protein-coding common_peak2_35_306_-0.530797172311155_7.9966962592146_4.02571122183447 chr19 46396690 46397626 + 4.02571122183447 NA exon (NM_001025391, exon 1 of 12) exon (NM_001025391, exon 1 of 12) 262 NM_015752 24069 Mm.41210 NM_015752 ENSMUSG00000025231 Sufu Su(fu) suppressor of fused homolog (Drosophila) protein-coding common_peak2_139_1329_-0.242540193492307_10.2559404336424_4.02555710797656 chr18 9449099 9451238 + 4.02555710797656 NA promoter-TSS (NM_026484) promoter-TSS (NM_026484) -18 NM_026484 67974 Mm.86523 NM_026484 ENSMUSG00000024286 Ccny 1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik cyclin Y protein-coding common_peak1_79_714_-0.337440581662264_9.31307914083462_4.02528655703825 chr1 167000617 167002241 + 4.02528655703825 NA promoter-TSS (NM_001160262) promoter-TSS (NM_001160262) 12 NM_001160261 226610 Mm.389217 NM_175461 ENSMUSG00000060568 Fam78b C030014K22Rik|C030020L09Rik family with sequence similarity 78, member B protein-coding common_peak2_57_504_-0.404863951940232_8.77770760166904_4.02518769166759 chr9 111045489 111047108 + 4.02518769166759 NA Intergenic ORR1E|LTR|ERVL-MaLR 10946 NM_001302377 54199 Mm.7336 NM_017466 ENSMUSG00000043953 Ccrl2 1810047I05Rik|Ackr5|CCR11|Cmkbr1l2|E01|L-CCR chemokine (C-C motif) receptor-like 2 protein-coding common_peak1_290_2459_0.165030279290091_11.3469577398716_4.02420851678659 chr14 57745079 57746925 + 4.02420851678659 NA 5' UTR (NM_015771, exon 1 of 8) 5' UTR (NM_015771, exon 1 of 8) 121 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak2_70_368_0.405682539786621_8.73031827595371_4.02320127481964 chr5 24629042 24630647 + 4.02320127481964 NA Intergenic Intergenic -15609 NR_003953 72252 Mm.87446 NR_003953 ENSMUSG00000038165 1700022A21Rik - glycerol-3-phosphate dehydrogenase 1-like pseudogene pseudo common_peak1_105_642_0.313679149301521_9.48551450197871_4.02282208658547-2 chr5 131519629 131519886 + 4.02282208658547 NA intron (NM_177047, intron 6 of 18) B1F1|SINE|Alu -212235 NM_145218 212996 Mm.299204 NM_145218 ENSMUSG00000034040 Wbscr17 AA388321|E330012B09Rik Williams-Beuren syndrome chromosome region 17 homolog (human) protein-coding common_peak1_105_642_0.313679149301521_9.48551450197871_4.02282208658547 chr14 79557090 79558850 + 4.02282208658547 NA intron (NM_001286411, intron 2 of 8) intron (NM_001286411, intron 2 of 8) -29721 NM_026474 67955 Mm.18972 NM_026474 ENSMUSG00000022024 Sugt1 2410174K12Rik|SGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) protein-coding common_peak2_31_113_0.689975560146783_7.17787779423813_4.02261680803548 chr11 88954837 88955524 + 4.02261680803548 NA intron (NM_029023, intron 1 of 12) intron (NM_029023, intron 1 of 12) 262 NM_029023 74617 Mm.34126 NM_029023 ENSMUSG00000000278 Scpep1 2410018F01Rik|4833411K15Rik|AI957256|Risc serine carboxypeptidase 1 protein-coding common_peak1_24_213_-0.655451794264763_7.41374108926876_4.02057154444035 chr4 46506870 46507367 + 4.02057154444035 NA exon (NM_029077, exon 6 of 6) exon (NM_029077, exon 6 of 6) 17789 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding common_peak1_24_213_-0.655451794264763_7.41374108926876_4.02057154444035-2 chr7 127260188 127260810 + 4.02057154444035 NA intron (NM_023203, intron 1 of 2) CpG 168 NM_023203 66422 Mm.29898 NM_023203 ENSMUSG00000042462 Dctpp1 2410015N17Rik|AI854235|RS21-C6 dCTP pyrophosphatase 1 protein-coding common_peak1_80_724_-0.335495101909418_9.33408963394759_4.02043974258373 chr3 89418549 89419323 + 4.02043974258373 NA promoter-TSS (NM_016904) promoter-TSS (NM_016904) 385 NM_011368 20416 Mm.86595 NM_011368 ENSMUSG00000042626 Shc1 Shc|ShcA|p66|p66shc src homology 2 domain-containing transforming protein C1 protein-coding common_peak1_130_1233_-0.252039417302544_10.1431069704981_4.01979904080201 chr14 75068610 75070222 + 4.01979904080201 NA intron (NR_030568, intron 2 of 3) intron (NR_030568, intron 2 of 3) 53389 NM_198642 271221 Mm.320280 NM_198642 ENSMUSG00000034959 Rubcnl 5031414D18Rik|Gm744|Gm911|Kiaa0226l RUN and cysteine rich domain containing beclin 1 interacting protein like protein-coding common_peak2_104_634_0.31496744901729_9.46809650616817_4.01951067324789 chr14 27507756 27509203 + 4.01951067324789 NA promoter-TSS (NM_177111) promoter-TSS (NM_177111) -19 NM_177111 320234 Mm.247767 NM_177111 ENSMUSG00000046753 Ccdc66 E230015L20Rik coiled-coil domain containing 66 protein-coding common_peak1_85_481_0.359450145210344_9.09261440883513_4.01919059766462 chr4 127015465 127016407 + 4.01919059766462 NA Intergenic Intergenic -5365 NR_045010 71514 Mm.257276 NM_023603 ENSMUSG00000028820 Sfpq 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|OTTMUSG00000009329|PSF|REP1 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) protein-coding common_peak2_63_560_-0.382379075110913_8.94066742305334_4.01861407412543 chr5 110135190 110136464 + 4.01861407412543 NA promoter-TSS (NM_001289578) promoter-TSS (NM_001289578) -3 NM_172717 231600 Mm.30264 NM_172717 ENSMUSG00000014668 Chfr 5730484M20Rik|C230082M18|RNF116 checkpoint with forkhead and ring finger domains protein-coding common_peak1_162_1579_-0.221864399143096_10.5147766434929_4.01820427269434 chr3 97932431 97934703 + 4.01820427269434 NA intron (NM_001033779, intron 1 of 1) intron (NM_001033779, intron 1 of 1) 3394 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding unique_peak1_20_57_0.919493648670926_6.31772781946303_4.01745073063919 chr1 153091602 153092088 + 4.01745073063919 NA intron (NM_175460, intron 7 of 10) intron (NM_175460, intron 7 of 10) 94602 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak1_20_57_0.919493648670926_6.31772781946303_4.01745073063919-3 chr14 121309837 121310256 + 4.01745073063919 NA intron (NM_145465, intron 2 of 10) intron (NM_145465, intron 2 of 10) 69184 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_20_57_0.919493648670926_6.31772781946303_4.01745073063919-8 chrX 75060121 75060550 + 4.01745073063919 NA intron (NM_181584, intron 1 of 9) L3|LINE|CR1 24570 NM_181584 210710 Mm.267056 NM_181584 ENSMUSG00000032750 Gab3 5930433H21Rik growth factor receptor bound protein 2-associated protein 3 protein-coding common_peak1_20_57_0.919493648670926_6.31772781946303_4.01745073063919-5 chr4 139214750 139215113 + 4.01745073063919 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 20820 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_20_57_0.919493648670926_6.31772781946303_4.01745073063919-2 chr13 24636500 24636940 + 4.01745073063919 NA intron (NM_178658, intron 1 of 13) MTEa|LTR|ERVL-MaLR -1928 NM_001080381 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_20_57_0.919493648670926_6.31772781946303_4.01745073063919-7 chrX 48462350 48462758 + 4.01745073063919 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 578 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak1_20_57_0.919493648670926_6.31772781946303_4.01745073063919 chr12 73646460 73646887 + 4.01745073063919 NA intron (NM_001313977, intron 2 of 14) Lx5b|LINE|L1 61877 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_20_57_0.919493648670926_6.31772781946303_4.01745073063919-4 chr16 38132171 38132541 + 4.01745073063919 NA intron (NM_019827, intron 1 of 10) intron (NM_019827, intron 1 of 10) -43096 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA common_peak1_20_57_0.919493648670926_6.31772781946303_4.01745073063919-6 chr8 25840107 25840493 + 4.01745073063919 NA intron (NM_001080793, intron 1 of 15) intron (NM_001080793, intron 1 of 15) 157 NM_001286207 23808 Mm.27706 NM_011791 ENSMUSG00000031575 Ash2l - ash2 (absent, small, or homeotic)-like (Drosophila) protein-coding common_peak2_185_1368_0.218522300816046_10.5281678816659_4.0172349496455-2 chr17 34023992 34025556 + 4.0172349496455 NA promoter-TSS (NM_009066) promoter-TSS (NM_009066) -94 NM_009066 19763 Mm.20343 NM_009066 ENSMUSG00000024325 Ring1 Ring1A ring finger protein 1 protein-coding common_peak2_185_1368_0.218522300816046_10.5281678816659_4.0172349496455 chr11 120597375 120599460 + 4.0172349496455 NA promoter-TSS (NM_001038230) promoter-TSS (NM_001038230) -4 NM_025389 66156 Mm.21645 NM_025389 ENSMUSG00000025135 Anapc11 1110011I19Rik|R75218 anaphase promoting complex subunit 11 protein-coding common_peak2_105_973_-0.285423885452873_9.78506601935591_4.01714506479533 chr6 29214595 29216916 + 4.01714506479533 NA intron (NM_001302933, intron 1 of 14) intron (NM_001302933, intron 1 of 14) 609 NM_001302933 23917 Mm.260707 NM_011829 ENSMUSG00000003500 Impdh1 B930086D20Rik|IMPDH-I inosine 5'-phosphate dehydrogenase 1 protein-coding common_peak1_40_350_-0.493883955239135_8.20838524268499_4.01678373662621-2 chr7 35990756 35991413 + 4.01678373662621 NA Intergenic Lx8b|LINE|L1 -188095 NM_177739 668501 Mm.286296 NM_177739 ENSMUSG00000044452 Zfp507 1810022O10Rik|A230056M16Rik|AL024009|AU021817|BB105092|Gm480|Znf507|mKIAA1084 zinc finger protein 507 protein-coding common_peak1_40_350_-0.493883955239135_8.20838524268499_4.01678373662621 chr10 80682153 80682854 + 4.01678373662621 NA Intergenic B3A|SINE|B2 -6210 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak1_103_626_0.316324234211605_9.45048374990784_4.01642885209877 chr2 181679846 181681093 + 4.01642885209877 NA exon (NM_009326, exon 1 of 10) exon (NM_009326, exon 1 of 10) 159 NM_009326 21400 Mm.24245 NM_009326 ENSMUSG00000059540 Tcea2 AI326274|S-II-T1|SII-T1|Tceat transcription elongation factor A (SII), 2 protein-coding common_peak1_119_761_0.288233867477095_9.71776412123187_4.01625252967224 chr11 94629243 94630709 + 4.01625252967224 NA 5' UTR (NM_133807, exon 1 of 7) 5' UTR (NM_133807, exon 1 of 7) 152 NM_133807 98238 Mm.172720 NM_133807 ENSMUSG00000020869 Lrrc59 AA959742|C78668 leucine rich repeat containing 59 protein-coding common_peak1_150_1447_-0.231325502097654_10.3841831360344_4.0156083497643 chr14 121365553 121368360 + 4.0156083497643 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 12274 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding unique_peak2_7_77_-1.21576126692344_5.67752158540053_4.01457788676469 chrX 73458514 73459044 + 4.01457788676469 NA intron (NM_207104, intron 1 of 6) intron (NM_207104, intron 1 of 6) 250 NM_028633 73738 Mm.264899 NM_028633 ENSMUSG00000031371 Haus7 1110020L19Rik|Uchl5ip|Uip1 HAUS augmin-like complex, subunit 7 protein-coding common_peak2_185_1835_-0.204921311339861_10.7398896877439_4.01386401719431 chr17 84957844 84959310 + 4.01386401719431 NA promoter-TSS (NR_027930) promoter-TSS (NR_027930) 576 NM_001159496 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak2_26_86_0.779264070990867_6.83257553134416_4.01375214321718 chr7 6330895 6331710 + 4.01375214321718 NA promoter-TSS (NM_001033249) promoter-TSS (NM_001033249) -868 NM_001033249 213011 Mm.333558 NM_001033249 ENSMUSG00000030443 Zfp583 BC056221|Znf583 zinc finger protein 583 protein-coding common_peak1_26_86_0.779264070990867_6.83257553134416_4.01375214321718 chr17 32363939 32364455 + 4.01375214321718 NA intron (NR_033525, intron 4 of 10) GC_rich|Low_complexity|Low_complexity -13620 NM_017476 54194 Mm.281005 NM_017476 ENSMUSG00000002625 Akap8l HAP95|Nakap95 A kinase (PRKA) anchor protein 8-like protein-coding common_peak1_19_52_0.963213773067578_6.20952734109699_4.01367412082816-3 chr15 102461514 102461960 + 4.01367412082816 NA intron (NM_001170911, intron 3 of 3) B1_Mm|SINE|Alu 2567 NM_025385 66151 Mm.393955 NM_025385 ENSMUSG00000023048 Prr13 1110020C13Rik|2010324E22Rik proline rich 13 protein-coding common_peak1_19_52_0.963213773067578_6.20952734109699_4.01367412082816 chr12 25330215 25330645 + 4.01367412082816 NA Intergenic MTE2a|LTR|ERVL-MaLR 201256 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_19_52_0.963213773067578_6.20952734109699_4.01367412082816-2 chr14 67713256 67713761 + 4.01367412082816 NA intron (NM_175384, intron 3 of 14) intron (NM_175384, intron 3 of 14) 2102 NM_001110162 108912 Mm.33831 NM_175384 ENSMUSG00000048922 Cdca2 2610311M19Rik|AI586158 cell division cycle associated 2 protein-coding common_peak1_85_772_-0.321985122484543_9.43333204268258_4.01358507948227 chr2 29655648 29656854 + 4.01358507948227 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 36531 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_71_636_-0.357239578010921_9.13652977325084_4.01337796058324 chr1 164072024 164073080 + 4.01337796058324 NA intron (NM_011346, intron 7 of 8) intron (NM_011346, intron 7 of 8) 10476 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak2_197_1486_0.209877842948101_10.6431278535265_4.01303681415133 chr5 21371751 21374245 + 4.01303681415133 NA exon (NM_008013, exon 1 of 2) exon (NM_008013, exon 1 of 2) 325 NM_008013 14190 Mm.292100 NM_008013 ENSMUSG00000039899 Fgl2 AI385601|musfiblp fibrinogen-like protein 2 protein-coding common_peak1_43_184_0.555028593363995_7.80889575719831_4.01196109451377-2 chr18 52465625 52466268 + 4.01196109451377 NA intron (NM_026040, intron 1 of 7) CpG 253 NM_026040 67222 Mm.100617 NM_026040 ENSMUSG00000024528 Srfbp1 2810036K01Rik|p49/STRAP serum response factor binding protein 1 protein-coding common_peak2_43_184_0.555028593363995_7.80889575719831_4.01196109451377 chr6 143114451 143115540 + 4.01196109451377 NA Intergenic (TCCA)n|Simple_repeat|Simple_repeat -14843 NM_001109688 74741 Mm.130260 NM_029081 ENSMUSG00000030279 C2cd5 5730419I09Rik|C030008B15Rik|CDP138 C2 calcium-dependent domain containing 5 protein-coding common_peak1_31_272_-0.569891566608328_7.80781135761569_4.01196109451377 chr1 192062931 192063415 + 4.01196109451377 NA intron (NM_011633, intron 3 of 9) intron (NM_011633, intron 3 of 9) 29426 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak1_43_184_0.555028593363995_7.80889575719831_4.01196109451377 chr15 35155138 35155950 + 4.01196109451377 NA exon (NM_019635, exon 1 of 11) exon (NM_019635, exon 1 of 11) 262 NM_019635 56274 Mm.262330 NM_019635 ENSMUSG00000022329 Stk3 0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1 serine/threonine kinase 3 protein-coding common_peak1_180_1320_0.221792564229533_10.4783110333616_4.0117118662643 chr7 141327149 141328752 + 4.0117118662643 NA promoter-TSS (NM_027797) promoter-TSS (NM_027797) -180 NM_001141950 71448 Mm.248960 NM_027797 ENSMUSG00000025505 Tmem80 5530601I19Rik transmembrane protein 80 protein-coding common_peak1_86_782_-0.320070666625188_9.45283316397845_4.01113358879103 chrX 48432353 48433801 + 4.01113358879103 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 30055 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak2_58_283_0.455779285537144_8.37763676227325_4.01083684849593 chr2 128293989 128295214 + 4.01083684849593 NA Intergenic ORR1C2|LTR|ERVL-MaLR 134750 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_58_283_0.455779285537144_8.37763676227325_4.01083684849593 chr2 78999145 79000279 + 4.01083684849593 NA Intergenic Lx6|LINE|L1 130665 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_127_830_0.277385529913891_9.83739743172729_4.01010541626272 chr15 75133650 75136577 + 4.01010541626272 NA Intergenic Intergenic -20148 NM_001310438 546644 NM_008531 ENSMUSG00000022582 Ly6g Gr-1|Gr1|Ly-6G lymphocyte antigen 6 complex, locus G protein-coding common_peak2_357_3216_0.144656675956385_11.7238285586309_4.00935510353737 chr4 101248954 101257711 + 4.00935510353737 NA intron (NM_146145, intron 1 of 24) B4A|SINE|B4 11950 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_117_744_0.291042100878657_9.68661766578885_4.00834888155182 chr2 181457754 181460340 + 4.00834888155182 NA intron (NM_028125, intron 1 of 2) CpG 379 NM_028125 72147 Mm.486504 NM_027656 ENSMUSG00000027583 Zbtb46 2610019F01Rik|4933406L05Rik|BZEL|Btbd4 zinc finger and BTB domain containing 46 protein-coding common_peak1_72_383_0.397356525664472_8.78364076355339_4.00832258934391 chr4 48124727 48125484 + 4.00832258934391 NA intron (NM_026343, intron 1 of 7) CpG 186 NM_026343 67727 Mm.171334 NM_026343 ENSMUSG00000061455 Stx17 4833418L03Rik|6330411F21Rik|9030425C21Rik|AW048351 syntaxin 17 protein-coding common_peak2_184_1823_-0.205000776075011_10.7303896261272_4.00813139610653 chr1 58801738 58805464 + 4.00813139610653 NA intron (NM_001080126, intron 1 of 8) intron (NM_001080126, intron 1 of 8) 1099 NM_001080126 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding common_peak1_88_802_-0.316237808753126_9.49113727314075_4.00732849584438 chr5 31193185 31193944 + 4.00732849584438 NA promoter-TSS (NM_001127356) promoter-TSS (NM_001127356) 260 NM_153680 266781 Mm.6118 NM_153680 ENSMUSG00000029146 Snx17 5830447M19Rik|AI790646|D5Ertd260e|b2b1625.1Clo|mKIAA0064 sorting nexin 17 protein-coding common_peak2_142_964_0.257805214426984_10.0432877393689_4.00715054828805 chr1 36470736 36472349 + 4.00715054828805 NA promoter-TSS (NM_033570) promoter-TSS (NM_033570) -55 NM_033570 94220 Mm.422638 NM_033570 ENSMUSG00000037408 Cnnm4 5430430O18Rik|Acdp4 cyclin M4 protein-coding common_peak1_142_964_0.257805214426984_10.0432877393689_4.00715054828805 chr1 36470709 36472297 + 4.00715054828805 NA promoter-TSS (NM_033570) promoter-TSS (NM_033570) -94 NM_033570 94220 Mm.422638 NM_033570 ENSMUSG00000037408 Cnnm4 5430430O18Rik|Acdp4 cyclin M4 protein-coding common_peak1_127_1201_-0.25513098402695_10.1036556886977_4.00714468190694 chr14 48445977 48447209 + 4.00714468190694 NA non-coding (NR_132324, exon 1 of 14) non-coding (NR_132324, exon 1 of 14) 241 NR_132324 218989 Mm.85211 NM_172600 ENSMUSG00000036339 Tmem260 5930435P15|6720456H20Rik transmembrane protein 260 protein-coding common_peak1_46_404_-0.45864701034597_8.432454592599_4.00701733679843 chr4 120666626 120667337 + 4.00701733679843 NA exon (NM_019563, exon 1 of 1) exon (NM_019563, exon 1 of 1) 418 NM_019563 56222 Mm.272646 NM_019563 ENSMUSG00000070803 Cited4 MRG-2|Mrg2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 protein-coding common_peak1_46_404_-0.45864701034597_8.432454592599_4.00701733679843-2 chr6 100833700 100834512 + 4.00701733679843 NA intron (NM_182939, intron 1 of 8) CpG 468 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding unique_peak2_20_180_-0.722371243284708_7.13866026544085_4.0065556335212-2 chr7 139145359 139146630 + 4.0065556335212 NA intron (NM_001162540, intron 1 of 11) intron (NM_001162540, intron 1 of 11) 42500 NM_021302 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding unique_peak2_20_180_-0.722371243284708_7.13866026544085_4.0065556335212 chr7 58483007 58484134 + 4.0065556335212 NA Intergenic Intergenic -174632 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_165_1611_-0.218517848173263_10.5453771044413_4.00648893378151 chr15 68257675 68259740 + 4.00648893378151 NA 5' UTR (NM_198644, exon 1 of 16) 5' UTR (NM_198644, exon 1 of 16) 149 NM_001145888 380993 Mm.309526 NM_198644 ENSMUSG00000022335 Zfat Gm922|Zfat1|Zfp406 zinc finger and AT hook domain containing protein-coding common_peak1_23_71_0.843850466649783_6.5918502347672_4.00644538332147-2 chr6 149365910 149366451 + 4.00644538332147 NA Intergenic Intergenic -42804 NM_001112796 12121 Mm.177181 NM_009753 ENSMUSG00000003452 Bicd1 B830009D06Rik|bic-D 1 bicaudal D homolog 1 (Drosophila) protein-coding common_peak1_23_71_0.843850466649783_6.5918502347672_4.00644538332147 chr11 117827465 117827933 + 4.00644538332147 NA intron (NM_027827, intron 1 of 10) intron (NM_027827, intron 1 of 10) -1685 NM_009387 21877 Mm.2661 NM_009387 ENSMUSG00000025574 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 protein-coding common_peak1_73_390_0.395371165090413_8.80871037985256_4.00612483008096 chr15 76710110 76711302 + 4.00612483008096 NA promoter-TSS (NM_058214) promoter-TSS (NM_058214) -34 NM_145471 223664 Mm.277582 NM_145471 ENSMUSG00000033728 Lrrc14 E130306I01Rik|mKIAA0014 leucine rich repeat containing 14 protein-coding common_peak1_58_514_-0.402902217028755_8.8069775135562_4.00612483008096 chr5 32458238 32458965 + 4.00612483008096 NA promoter-TSS (NM_172707) promoter-TSS (NM_172707) -369 NM_172707 19046 Mm.241931 NM_172707 ENSMUSG00000014956 Ppp1cb 1200010B19 protein phosphatase 1, catalytic subunit, beta isoform protein-coding common_peak2_89_812_-0.314320593324039_9.50995124541301_4.00594631967595 chr12 33146895 33148511 + 4.00594631967595 NA promoter-TSS (NM_028139) promoter-TSS (NM_028139) 17 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_117_1097_-0.268523622777018_9.96640052761669_4.00556136234196 chr6 70844456 70845395 + 4.00556136234196 NA exon (NM_001313918, exon 1 of 3) exon (NM_001313918, exon 1 of 3) 410 NM_001313918 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak1_26_229_-0.62328248410478_7.53384880889199_4.00554746744072 chr16 55754520 55755200 + 4.00554746744072 NA Intergenic Intergenic 67278 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak1_54_476_-0.416554437619595_8.68956823719571_4.00519285891354 chr6 120469799 120470760 + 4.00519285891354 NA intron (NM_008359, intron 1 of 12) intron (NM_008359, intron 1 of 12) 7082 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak1_364_3298_0.142611550699018_11.7591188379144_4.00518975575138 chr11 51634903 51638841 + 4.00518975575138 NA promoter-TSS (NM_025346) promoter-TSS (NM_025346) -976 NM_025346 66089 Mm.288183 NM_025346 ENSMUSG00000001054 Rmnd5b 0610039K22Rik|Gid2 required for meiotic nuclear division 5 homolog B protein-coding common_peak1_38_332_-0.506434917463401_8.12616090833956_4.00426191262904 chr17 28006321 28007064 + 4.00426191262904 NA intron (NM_001286040, intron 11 of 24) intron (NM_001286040, intron 11 of 24) 73892 NM_013687 21463 Mm.29758 NM_013687 ENSMUSG00000062859 Tcp11 D17Ken1|Tcp-11 t-complex protein 11 protein-coding common_peak1_19_171_-0.735130527071322_7.05869949116644_4.0041636164996 chr9 42108672 42109133 + 4.0041636164996 NA intron (NM_011436, intron 1 of 47) intron (NM_011436, intron 1 of 47) 15387 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak1_92_842_-0.308572100054493_9.56510277091484_4.00372486642622 chr8 54529072 54530132 + 4.00372486642622 NA intron (NM_029701, intron 1 of 4) CpG 396 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak1_174_1262_0.226912377614301_10.4160951125947_4.00239542006804 chr7 64011043 64012957 + 4.00239542006804 NA Intergenic Intergenic -73085 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak1_141_955_0.258905049052625_10.0303193325071_4.00147415119375 chr17 28222846 28224467 + 4.00147415119375 NA intron (NM_027185, intron 5 of 10) intron (NM_027185, intron 5 of 10) -9098 NM_011145 19015 Mm.328914 NM_011145 ENSMUSG00000002250 Ppard NUC-1|NUC1|Nr1c2|PPAR-beta|PPAR-delta|PPAR[b]|PPARdelta|Pparb|Pparb/d peroxisome proliferator activator receptor delta protein-coding unique_peak2_50_229_0.502180726183082_8.09658041403592_4.00133503407086 chr1 131188333 131189870 + 4.00133503407086 NA intron (NM_018750, intron 2 of 5) intron (NM_018750, intron 2 of 5) 11084 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak2_65_332_0.424553891775975_8.59165531295925_4.00102372069329 chr3 52926546 52928541 + 4.00102372069329 NA intron (NR_040555, intron 1 of 4) intron (NR_040555, intron 1 of 4) 123 NR_040555 622124 Mm.389434 NR_040555 ENSMUSG00000104401 Gm20750 - predicted gene, 20750 ncRNA common_peak2_273_2275_0.170665025414635_11.2376173550139_4.00099088076107 chr4 8910928 8914293 + 4.00099088076107 NA Intergenic Intergenic 222204 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding unique_peak2_23_204_-0.665704631413352_7.34662778379877_4.00071557765169-2 chr5 105305474 105306597 + 4.00071557765169 NA Intergenic (CAGAGA)n|Simple_repeat|Simple_repeat -12336 NM_194336 100702 Mm.491210 NM_194336 ENSMUSG00000079362 Gbp6 AI595338|Mpa2l guanylate binding protein 6 protein-coding unique_peak2_23_204_-0.665704631413352_7.34662778379877_4.00071557765169 chr10 20882028 20883337 + 4.00071557765169 NA Intergenic Intergenic -69865 NM_026203 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak1_23_204_-0.665704631413352_7.34662778379877_4.00071557765169 chr14 30620184 30620641 + 4.00071557765169 NA intron (NM_011103, intron 1 of 17) intron (NM_011103, intron 1 of 17) 5796 NM_011103 18753 Mm.2314 NM_011103 ENSMUSG00000021948 Prkcd AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd protein kinase C, delta protein-coding common_peak1_23_204_-0.665704631413352_7.34662778379877_4.00071557765169-2 chr4 46572814 46573403 + 4.00071557765169 NA intron (NM_001164804, intron 1 of 11) MIRc|SINE|MIR -6668 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak1_242_2494_-0.17434750107846_11.1976503496854_3.9995649714719 chr14 70795699 70799382 + 3.9995649714719 NA Intergenic Intergenic 23159 NM_010071 13449 Mm.243323 NM_010071 ENSMUSG00000022102 Dok2 DokR|Frip docking protein 2 protein-coding common_peak2_232_2376_-0.178814627068586_11.1255188744081_3.99895371457358 chr17 27341154 27344435 + 3.99895371457358 NA Intergenic Intergenic -12944 NR_106076 102465701 NR_106076 ENSMUSG00000106578 Mir7217 mmu-mir-7217 microRNA 7217 ncRNA common_peak1_114_1065_-0.271425331787347_9.9222790568655_3.99881553522965 chr7 106643429 106645278 + 3.99881553522965 NA intron (NM_001277182, intron 1 of 3) intron (NM_001277182, intron 1 of 3) 292 NM_001277179 434223 Mm.276443 NM_001277179 Gm1966 - predicted gene 1966 protein-coding common_peak2_47_209_0.526142261612329_7.97731664847229_3.99694838138989 chr16 32113181 32114268 + 3.99694838138989 NA Intergenic Intergenic 13922 NM_025892 66994 Mm.22990 NM_025892 ENSMUSG00000035790 Cep19 1500031L02Rik|AI428934|AL022620 centrosomal protein 19 protein-coding common_peak1_74_398_0.389904772067322_8.83519732225601_3.99638255380493 chr1 151979758 151981121 + 3.99638255380493 NA exon (NM_197990, exon 3 of 6) exon (NM_197990, exon 3 of 6) 109881 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak2_74_398_0.389904772067322_8.83519732225601_3.99638255380493 chr14 66296593 66298185 + 3.99638255380493 NA promoter-TSS (NR_038077) promoter-TSS (NR_038077) -260 NR_038077 69303 Mm.352258 NR_038077 ENSMUSG00000085984 1700001G11Rik - RIKEN cDNA 1700001G11 gene ncRNA common_peak2_124_804_0.281275806012724_9.79348287600834_3.99622457798256 chr4 116650552 116652257 + 3.99622457798256 NA 5' UTR (NM_021473, exon 1 of 9) 5' UTR (NM_021473, exon 1 of 9) 270 NM_021473 58810 Mm.30085 NM_021473 ENSMUSG00000028692 Akr1a1 2610201A18Rik|Akr1a4 aldo-keto reductase family 1, member A1 (aldehyde reductase) protein-coding common_peak1_74_665_-0.349228658781595_9.20476403768046_3.9955107621552 chr10 62194954 62196521 + 3.9955107621552 NA intron (NM_197996, intron 3 of 7) intron (NM_197996, intron 3 of 7) -1510 NR_106122 102465767 NR_106122 ENSMUSG00000099185 Mir7662 Gm27876|mmu-mir-7662 microRNA 7662 ncRNA common_peak2_75_405_0.388252908584427_8.85946237147739_3.99538661448483-2 chr4 62652653 62655565 + 3.99538661448483 NA intron (NM_134257, intron 10 of 15) intron (NM_134257, intron 10 of 15) -19865 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_75_405_0.388252908584427_8.85946237147739_3.99538661448483 chr2 144488779 144490738 + 3.99538661448483 NA intron (NM_172859, intron 12 of 20) intron (NM_172859, intron 12 of 20) 24582 NR_038065 171588 Mm.450554 NR_038065 ENSMUSG00000083674 Gm38402 - zinc finger protein pseudogene pseudo common_peak2_66_339_0.421152764012021_8.61996731814371_3.99425079558152 chr8 107030878 107032246 + 3.99425079558152 NA intron (NM_126165, intron 1 of 10) CpG 236 NM_126165 116733 Mm.236004 NM_126165 ENSMUSG00000031913 Vps4a 4930589C15Rik|AI325971|AW553189 vacuolar protein sorting 4A protein-coding common_peak2_66_588_-0.371580123680737_9.01633376199009_3.99383499608035 chr11 96317857 96319612 + 3.99383499608035 NA 5' UTR (NM_010459, exon 1 of 2) 5' UTR (NM_010459, exon 1 of 2) 467 NM_010459 15412 Mm.3546 NM_010459 ENSMUSG00000038692 Hoxb4 Hox-2.6 homeobox B4 protein-coding common_peak1_55_485_-0.411635442401499_8.71899478240503_3.99207820161027 chr10 21946250 21947133 + 3.99207820161027 NA intron (NM_001161845, intron 2 of 13) intron (NM_001161845, intron 2 of 13) -31981 NM_001161847 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak2_55_262_0.474258071911979_8.27604802524829_3.99192302850745 chr17 3504794 3507102 + 3.99192302850745 NA intron (NM_001286757, intron 3 of 12) intron (NM_001286757, intron 3 of 12) 22458 NM_001286757 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak2_292_2482_0.163725117016009_11.3597311046848_3.99163172333889 chr11 102294892 102298372 + 3.99163172333889 NA promoter-TSS (NM_001098837) promoter-TSS (NM_001098837) -3 NM_001098837 217218 Mm.390381 NM_001098836 ENSMUSG00000059995 Atxn7l3 E030022H21Rik ataxin 7-like 3 protein-coding unique_peak2_10_100_-1.0250260512442_6.1456984571297_3.99034070370995-2 chr6 86133242 86134067 + 3.99034070370995 NA Intergenic Intergenic 55606 NM_001271859 11519 Mm.104155 NM_013458 ENSMUSG00000030000 Add2 2900072M03Rik|add97 adducin 2 (beta) protein-coding unique_peak2_10_100_-1.0250260512442_6.1456984571297_3.99034070370995-3 chr9 10197662 10198203 + 3.99034070370995 NA intron (NM_001170787, intron 3 of 24) IAPEz-int|LTR|ERVK 303501 NR_105745 102466147 NR_105745 ENSMUSG00000098408 Mir6237 Gm27411|mmu-mir-6237 microRNA 6237 ncRNA unique_peak2_10_100_-1.0250260512442_6.1456984571297_3.99034070370995 chr11 99023520 99024214 + 3.99034070370995 NA intron (NM_011623, intron 1 of 35) intron (NM_011623, intron 1 of 35) 322 NM_011623 21973 Mm.4237 NM_011623 ENSMUSG00000020914 Top2a Top-2 topoisomerase (DNA) II alpha protein-coding common_peak2_224_2282_-0.18243091978175_11.0654996843338_3.99001033836911 chr2 35108273 35111440 + 3.99001033836911 NA intron (NM_012018, intron 1 of 43) intron (NM_012018, intron 1 of 43) 364 NM_012018 26920 Mm.231332 NM_012018 ENSMUSG00000057110 Cntrl 6720467O09Rik|AA968343|Cep1|Cep110|IB3/5|Ma2a8|b2b1468.1Clo|b2b1468Clo centriolin protein-coding unique_peak1_11_20_1.39484573412698_5.08974028984225_3.98923275154812 chr18 82814224 82814635 + 3.98923275154812 NA Intergenic Intergenic -41468 NR_125720 73985 Mm.399211 NR_125720 ENSMUSG00000097738 4930445N18Rik 3010027C24Rik RIKEN cDNA 4930445N18 gene ncRNA unique_peak1_10_17_1.46326043006528_4.90155521647495_3.98915980442696 chr15 100181511 100181807 + 3.98915980442696 NA intron (NM_172819, intron 16 of 32) intron (NM_172819, intron 16 of 32) 6377 NR_037311 100499528 NR_037311 ENSMUSG00000092752 Mir3473a Mir3473|mir-3473a|mmu-mir-3473|mmu-mir-3473a microRNA 3473a ncRNA common_peak1_172_1688_-0.212743081308837_10.615582072147_3.98867231051589 chr2 31140855 31142626 + 3.98867231051589 NA intron (NM_001177648, intron 1 of 16) CpG 268 NM_001177649 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak2_454_4378_0.124064895145715_12.1584181820255_3.98622058631217 chr19 3767095 3770013 + 3.98622058631217 NA intron (NM_001167886, intron 2 of 10) CpG-7172 1133 NM_001167885 225888 Mm.278578 NM_144871 ENSMUSG00000045098 Kmt5b AA117471|C630029K18Rik|Suv4-20h1|Suv420h1 lysine methyltransferase 5B protein-coding common_peak1_110_1024_-0.277490027028113_9.86266318087875_3.98580039423652 chr7 80946866 80948081 + 3.98580039423652 NA promoter-TSS (NM_019951) promoter-TSS (NM_019951) 77 NM_019951 56529 Mm.43760 NM_019951 ENSMUSG00000025724 Sec11a 1810012E07Rik|18kDa|Sec11l1|Sid2895p|Spc18|sid2895 SEC11 homolog A, signal peptidase complex subunit protein-coding common_peak2_110_1024_-0.277490027028113_9.86266318087875_3.98580039423652 chr16 50528276 50530412 + 3.98580039423652 NA intron (NR_040379, intron 1 of 5) CpG 842 NR_040379 619312 Mm.427671 NR_040379 G730013B05Rik linc-Cblb|linc1610 RIKEN cDNA G730013B05 gene ncRNA common_peak1_482_4726_0.119422280153614_12.2664202894355_3.98575057872536 chr10 79854538 79858271 + 3.98575057872536 NA intron (NM_001283013, intron 1 of 12) intron (NM_001283013, intron 1 of 12) -1433 NR_029447 414101 Mm.401339 NR_029447 E130317F20Rik - RIKEN cDNA E130317F20 gene ncRNA common_peak1_41_359_-0.487766141344819_8.24797002565726_3.98550836714969 chr1 37299799 37300558 + 3.98550836714969 NA intron (NM_001290797, intron 1 of 25) CpG 340 NM_001290797 269180 Mm.5294 NM_030266 ENSMUSG00000026113 Inpp4a 107kDa|9630012D15|D130048C09Rik|R74740 inositol polyphosphate-4-phosphatase, type I protein-coding common_peak1_381_4221_-0.132727046174006_11.9773473402602_3.98510779190732 chr10 128491696 128495317 + 3.98510779190732 NA TTS (NM_172259) TTS (NM_172259) 319 NM_010860 17904 Mm.337074 NM_010860 ENSMUSG00000090841 Myl6 ESMLC|LC17|LC17-GI|MLC-3|MLC1SM|Myln myosin, light polypeptide 6, alkali, smooth muscle and non-muscle protein-coding unique_peak2_28_246_-0.59970391707211_7.64851527304862_3.98408111250586 chr15 62032165 62033446 + 3.98408111250586 NA Intergenic Intergenic -5181 NR_132747 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 plasmacytoma variant translocation 1 ncRNA unique_peak2_28_246_-0.59970391707211_7.64851527304862_3.98408111250586-2 chr7 24316146 24317310 + 3.98408111250586 NA promoter-TSS (NM_001199321) promoter-TSS (NM_001199321) -62 NM_001199321 22756 Mm.295762 NM_009568 ENSMUSG00000074282 Zfp94 - zinc finger protein 94 protein-coding unique_peak2_36_315_-0.523997096965692_8.04178219969426_3.98361851914611 chr12 85122306 85124124 + 3.98361851914611 NA intron (NM_030225, intron 9 of 14) intron (NM_030225, intron 9 of 14) 12382 NM_030225 78920 Mm.296221 NM_030225 ENSMUSG00000004789 Dlst 1600017E01Rik|4632413C10Rik|4930529O08Rik|DLTS dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) protein-coding common_peak1_34_297_-0.537722805938628_7.95030711749285_3.98302877582471 chr1 180904105 180904898 + 3.98302877582471 NA exon (NM_133705, exon 1 of 7) exon (NM_133705, exon 1 of 7) 227 NM_133705 69051 Mm.274180 NM_133705 ENSMUSG00000026520 Pycr2 1810018M05Rik|P5cr2 pyrroline-5-carboxylate reductase family, member 2 protein-coding common_peak1_41_172_0.56945872734813_7.71935759131079_3.98242535250641 chr11 106664121 106664923 + 3.98242535250641 NA intron (NM_001305158, intron 13 of 14) intron (NM_001305158, intron 13 of 14) 50759 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak2_77_694_-0.341313406816653_9.27021246420254_3.98239130319726 chr15 102470280 102471942 + 3.98239130319726 NA intron (NM_001174073, intron 1 of 12) CpG 479 NM_001174073 18521 Mm.236513 NM_011042 ENSMUSG00000056851 Pcbp2 AW412548|Hnrpx|alphaCP-2 poly(rC) binding protein 2 protein-coding common_peak1_51_449_-0.431747635389749_8.59790737352216_3.98198393474636 chr11 116389567 116390170 + 3.98198393474636 NA intron (NM_027258, intron 2 of 18) IAPEz-int|LTR|ERVK 23164 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_144_1382_-0.236816539759605_10.3151771712707_3.98062887863459 chr7 25718235 25719994 + 3.98062887863459 NA promoter-TSS (NM_028771) promoter-TSS (NM_028771) -61 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak1_201_1527_0.206031676756064_10.6804446664138_3.980247643606 chr7 34983414 34986165 + 3.980247643606 NA intron (NM_008820, intron 9 of 14) intron (NM_008820, intron 9 of 14) 71777 NM_009884 12611 Mm.273090 NM_009884 ENSMUSG00000056216 Cebpg C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP CCAAT/enhancer binding protein (C/EBP), gamma protein-coding common_peak2_78_428_0.377265253613771_8.93346646430643_3.98016553394257 chr13 53376684 53378009 + 3.98016553394257 NA promoter-TSS (NM_009269) promoter-TSS (NM_009269) 15 NM_009269 268656 Mm.240336 NM_009269 ENSMUSG00000021468 Sptlc1 AW552086|C77762|E030036H05|Lcb1 serine palmitoyltransferase, long chain base subunit 1 protein-coding common_peak1_56_494_-0.406785995416799_8.74789171725857_3.9799857573836 chr13 23581498 23582270 + 3.9799857573836 NA TTS (NM_175654) TTS (NM_175654) 282 NM_175654 319156 Mm.260530 NM_175654 ENSMUSG00000061482 Hist1h4d - histone cluster 1, H4d protein-coding common_peak1_18_163_-0.757187801221193_6.97895810400749_3.97919613755731 chr5 113593923 113594373 + 3.97919613755731 NA Intergenic ORR1A2|LTR|ERVL-MaLR 43728 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak1_378_3463_0.138808145161281_11.8276272873074_3.97880111472545 chr17 12991113 12993287 + 3.97880111472545 NA promoter-TSS (NM_001113533) promoter-TSS (NM_001113533) 59 NM_001113533 60532 Mm.275521 NM_175394 ENSMUSG00000060475 Wtap 2810408K05Rik|9430038B09Rik Wilms tumour 1-associating protein protein-coding common_peak1_34_130_0.648022712986084_7.35743435803049_3.97824550207297-3 chr9 32518248 32518984 + 3.97824550207297 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 22836 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_34_130_0.648022712986084_7.35743435803049_3.97824550207297-2 chr15 67087682 67088363 + 3.97824550207297 NA Intergenic Intergenic 88860 NM_009177 20442 Mm.248334 NM_009177 ENSMUSG00000013846 St3gal1 5330418N22Rik|AI467004|ST3GalI|Siat4|Siat4a|St3gal-1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding common_peak1_34_130_0.648022712986084_7.35743435803049_3.97824550207297 chr11 74561206 74562041 + 3.97824550207297 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 28535 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_79_713_-0.33542141402561_9.31206955701629_3.97790289863929 chrX 150477769 150478820 + 3.97790289863929 NA Intergenic Intergenic -19144 NM_001164683 382245 Mm.277309 NM_001164683 ENSMUSG00000041353 Tmem29 2700081K05Rik|6330540D07Rik|CXorf44-like transmembrane protein 29 protein-coding common_peak1_107_660_0.306925727704614_9.52196932536_3.97574990888739 chr4 153956742 153957999 + 3.97574990888739 NA intron (NM_001163019, intron 1 of 2) CpG 133 NM_001163019 97159 Mm.7066 NM_175287 ENSMUSG00000047613 A430005L14Rik C79672 RIKEN cDNA A430005L14 gene protein-coding common_peak1_56_269_0.467683122499341_8.3106571583005_3.97555677702443 chr4 135898438 135899259 + 3.97555677702443 NA intron (NM_009924, intron 1 of 1) intron (NM_009924, intron 1 of 1) 3659 NM_009924 12802 Mm.297251 NM_009924 ENSMUSG00000062585 Cnr2 CB-2|CB2|CB2-R cannabinoid receptor 2 (macrophage) protein-coding common_peak1_81_732_-0.329613811882028_9.3528624821928_3.97498808715036 chr2 11186312 11187436 + 3.97498808715036 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 14492 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_165_1610_-0.217622598351864_10.5449294795306_3.97496753784857 chr7 44997047 44998760 + 3.97496753784857 NA promoter-TSS (NM_029410) promoter-TSS (NM_029410) 255 NM_016849 54131 Mm.3960 NM_016849 ENSMUSG00000003184 Irf3 C920001K05Rik|IRF-3 interferon regulatory factor 3 protein-coding unique_peak2_30_263_-0.577711914624148_7.75553816204638_3.97468043273941 chrX 50599250 50601252 + 3.97468043273941 NA intron (NR_015505, intron 9 of 19) intron (NR_015505, intron 9 of 19) 35070 NR_015505 103012 Mm.482523 NR_015505 ENSMUSG00000085396 Firre 5830467J12Rik|6720401G13Rik|AW048145 functional intergenic repeating RNA element ncRNA common_peak2_68_354_0.41092010585475_8.67713526731942_3.97406543989506 chr2 144230397 144232025 + 3.97406543989506 NA Intergenic MTEa|LTR|ERVL-MaLR 34991 NR_030762 100313519 Mm.453538 NR_030762 ENSMUSG00000077714 Snord17 MBI-43 small nucleolar RNA, C/D box 17 snoRNA common_peak2_222_1739_0.193612283218313_10.8616777323452_3.97248143037024 chr2 158722132 158725102 + 3.97248143037024 NA intron (NM_153089, intron 2 of 10) intron (NM_153089, intron 2 of 10) -44482 NM_027975 71878 Mm.85162 NM_027975 ENSMUSG00000027654 Fam83d 2310007D09Rik|BB104611 family with sequence similarity 83, member D protein-coding common_peak2_82_742_-0.327712531370247_9.37336213485347_3.97131564799448 chr12 77533453 77536240 + 3.97131564799448 NA Intergenic ORR1B1|LTR|ERVL-MaLR 124705 NM_001252616 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding common_peak1_127_1200_-0.253930239021399_10.1030553161949_3.97065324294008 chr11 87592032 87593243 + 3.97065324294008 NA intron (NM_133215, intron 1 of 18) intron (NM_133215, intron 1 of 18) 420 NM_133215 170749 Mm.399376 NM_133215 ENSMUSG00000018401 Mtmr4 AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647 myotubularin related protein 4 protein-coding common_peak1_154_1490_-0.227276750670816_10.428426166948_3.97019024357285 chr7 45153679 45154924 + 3.97019024357285 NA promoter-TSS (NM_001278207) promoter-TSS (NM_001278207) -2 NM_029406 68845 Mm.181689 NM_029406 ENSMUSG00000003423 Pih1d1 1110061L23Rik|4933413A04Rik|Nop17 PIH1 domain containing 1 protein-coding common_peak2_251_2600_-0.170016901618498_11.2598422331337_3.96988064993811 chr2 31060027 31063858 + 3.96988064993811 NA intron (NM_001177648, intron 6 of 16) intron (NM_001177648, intron 6 of 16) 34558 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_39_341_-0.500105976068765_8.16779952685151_3.96931184696607 chr5 21701299 21702054 + 3.96931184696607 NA promoter-TSS (NM_178728) promoter-TSS (NM_178728) -331 NM_178728 242864 Mm.153292 NM_178728 ENSMUSG00000044968 Napepld A530089G06|Mbldc1|NAPE-PLD N-acyl phosphatidylethanolamine phospholipase D protein-coding common_peak1_104_635_0.312697275392464_9.46923159298059_3.96930980573617 chr2 30205281 30206590 + 3.96930980573617 NA promoter-TSS (NM_172404) promoter-TSS (NM_172404) -236 NM_172404 70266 Mm.216089 NM_172404 ENSMUSG00000039648 Kyat1 2010009K05Rik|AI182306|Ccbl1|Gtk|Kat1|KatI kynurenine aminotransferase 1 protein-coding common_peak2_203_2038_-0.192750660516428_10.8972707297584_3.96921471124299 chr8 31148867 31151258 + 3.96921471124299 NA promoter-TSS (NM_144927) promoter-TSS (NM_144927) -254 NM_144927 234138 Mm.349800 NM_144927 ENSMUSG00000031577 Tti2 - TELO2 interacting protein 2 protein-coding common_peak2_272_2852_-0.161784472708389_11.3973717952275_3.96912072651004 chr16 11252185 11255235 + 3.96912072651004 NA TTS (NR_035466) TTS (NR_035466) 615 NM_001130008 14852 Mm.325827 NM_146066 ENSMUSG00000062203 Gspt1 AI314175|AI326449|AV307676|C79774|G1st|Gst-1 G1 to S phase transition 1 protein-coding unique_peak1_18_48_0.985654359281682_6.10753702375605_3.96845666072387-2 chr17 84148424 84148865 + 3.96845666072387 NA Intergenic Intergenic 39303 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_18_48_0.985654359281682_6.10753702375605_3.96845666072387 chr9 101079099 101079655 + 3.96845666072387 NA intron (NM_001100451, intron 1 of 1) B3A|SINE|B2 4615 NM_001100451 77853 Mm.326206 NM_001100451 ENSMUSG00000066415 Msl2 E130103E02Rik|Msl2l1|Rnf184 male-specific lethal 2 homolog (Drosophila) protein-coding unique_peak1_18_48_0.985654359281682_6.10753702375605_3.96845666072387 chr12 98249401 98249842 + 3.96845666072387 NA intron (NM_008079, intron 5 of 16) intron (NM_008079, intron 5 of 16) 9838 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding unique_peak1_18_48_0.985654359281682_6.10753702375605_3.96845666072387-3 chr18 68218738 68219172 + 3.96845666072387 NA intron (NM_172631, intron 3 of 5) Lx8|LINE|L1 42018 NR_106078 102465702 NR_106078 ENSMUSG00000098253 Mir7219 Gm27613|mmu-mir-7219 microRNA 7219 ncRNA common_peak1_48_216_0.515325004466205_8.01921373467758_3.96844162727705 chr13 100616329 100617208 + 3.96844162727705 NA TTS (NM_001283011) TTS (NM_001283011) 176 NM_178410 218518 Mm.25300 NM_178410 ENSMUSG00000021636 Marveld2 BC003296|MARVD2|Mrvldc2|Tric|Trica|Tricb|Tricc MARVEL (membrane-associating) domain containing 2 protein-coding common_peak2_48_216_0.515325004466205_8.01921373467758_3.96844162727705 chr17 33470636 33471939 + 3.96844162727705 NA Intergenic Intergenic 38388 NM_183282 69481 Mm.154333 NM_183282 ENSMUSG00000092519 Actl9 1700029I08Rik|AV259599 actin-like 9 protein-coding common_peak1_48_216_0.515325004466205_8.01921373467758_3.96844162727705-2 chr7 101456849 101457816 + 3.96844162727705 NA intron (NM_001008548, intron 2 of 30) intron (NM_001008548, intron 2 of 30) 6080 NM_001243757 207728 Mm.247564 NM_001008548 ENSMUSG00000030653 Pde2a CGS-PDE|cGSPDE phosphodiesterase 2A, cGMP-stimulated protein-coding common_peak1_42_367_-0.477834785803061_8.28464456315548_3.96831385073955 chr2 127142912 127143738 + 3.96831385073955 NA promoter-TSS (NM_001163528) promoter-TSS (NM_001163528) 132 NM_001163527 73338 Mm.57559 NM_001163527 ENSMUSG00000074825 Itpripl1 1700041B20Rik inositol 1,4,5-triphosphate receptor interacting protein-like 1 protein-coding unique_peak2_42_367_-0.477834785803061_8.28464456315548_3.96831385073955 chr16 24185923 24187956 + 3.96831385073955 NA Intergenic Intergenic -198327 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_116_1085_-0.267730422043217_9.95094317678275_3.9660322258577 chrX 101268358 101269494 + 3.9660322258577 NA promoter-TSS (NM_013563) promoter-TSS (NM_013563) -671 NM_013563 16186 Mm.2923 NM_013563 ENSMUSG00000031304 Il2rg CD132|[g]c|gamma(c)|gc|p64 interleukin 2 receptor, gamma chain protein-coding common_peak1_82_459_0.364015818223972_9.02749796005636_3.96557393439684 chr8 20550135 20551130 + 3.96557393439684 NA Intergenic CpG -64295 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding common_peak1_101_610_0.319254518495082_9.41465582906627_3.96523076334442 chr16 92785445 92786782 + 3.96523076334442 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 39961 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_63_559_-0.379805131447087_8.93938045122142_3.96519982546317 chr6 83866865 83867914 + 3.96519982546317 NA Intergenic CpG -35648 NM_146169 232164 Mm.404420 NM_146169 ENSMUSG00000045896 Paip2b - poly(A) binding protein interacting protein 2B protein-coding common_peak1_30_108_0.69849787995738_7.11743326475562_3.96482739610351-2 chr7 29518181 29518633 + 3.96482739610351 NA Intergenic CpG -12947 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding common_peak1_30_108_0.69849787995738_7.11743326475562_3.96482739610351 chr12 73709579 73710028 + 3.96482739610351 NA intron (NM_001313977, intron 10 of 14) intron (NM_001313977, intron 10 of 14) 125007 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_449_5115_-0.119904013252329_12.2608485422555_3.96391528688745 chr8 86852785 86856379 + 3.96391528688745 NA intron (NM_030563, intron 2 of 6) intron (NM_030563, intron 2 of 6) 30676 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_95_871_-0.301184234312119_9.61759220762087_3.96136932202467 chr16 75906965 75909825 + 3.96136932202467 NA intron (NM_023380, intron 1 of 7) intron (NM_023380, intron 1 of 7) 871 NM_023380 67742 Mm.131406 NM_023380 ENSMUSG00000022876 Samsn1 4930571B16Rik|930571B16Rik|Hacs1|SLy2 SAM domain, SH3 domain and nuclear localization signals, 1 protein-coding common_peak2_376_3440_0.139056052850419_11.8181402031622_3.96115378775983 chr1 166408208 166411994 + 3.96115378775983 NA promoter-TSS (NM_001142948) promoter-TSS (NM_001142948) -273 NM_001142948 71592 Mm.192094 NM_175170 ENSMUSG00000040596 Pogk 9130401E23Rik|BASS2|mKIAA1513 pogo transposable element with KRAB domain protein-coding common_peak2_256_2659_-0.167608881231876_11.2934060897726_3.96097210608868 chr10 63022464 63025117 + 3.96097210608868 NA promoter-TSS (NM_001079824) promoter-TSS (NM_001079824) 59 NM_001079824 432467 Mm.274784 NM_001079824 ENSMUSG00000020069 Hnrnph3 AA693301|AI666703|Hnrph3 heterogeneous nuclear ribonucleoprotein H3 protein-coding common_peak1_22_196_-0.683591015362866_7.28025631177494_3.9608894101484 chr13 23745059 23745497 + 3.9608894101484 NA exon (NM_175653, exon 1 of 1) exon (NM_175653, exon 1 of 1) 243 NM_175653 319148 Mm.262517 NM_175653 ENSMUSG00000069310 Hist1h3c H3-143 histone cluster 1, H3c protein-coding common_peak2_283_2385_0.1660058405245_11.3033812479575_3.96067522407762 chr1 138131356 138140221 + 3.96067522407762 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 39338 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding unique_peak2_8_84_-1.13131788545139_5.84373199341201_3.96037045851925 chr3 84715323 84716026 + 3.96037045851925 NA Intergenic MTEb|LTR|ERVL-MaLR 49482 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding common_peak2_206_1577_0.20284834638662_10.7253056632068_3.9597229274263 chr7 34983298 34986439 + 3.9597229274263 NA intron (NM_008820, intron 9 of 14) intron (NM_008820, intron 9 of 14) 71698 NM_009884 12611 Mm.273090 NM_009884 ENSMUSG00000056216 Cebpg C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP CCAAT/enhancer binding protein (C/EBP), gamma protein-coding common_peak1_25_221_-0.638994621709174_7.47491855549552_3.95879061101009 chr13 43247225 43247809 + 3.95879061101009 NA intron (NM_001033399, intron 1 of 1) B4|SINE|B4 56655 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding unique_peak2_39_160_0.586829660702516_7.62433170846587_3.95873070483975 chr1 36962131 36963372 + 3.95873070483975 NA Intergenic Intergenic -23224 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding unique_peak2_17_155_-0.780716856989581_6.89504379036746_3.95855249918688 chr2 83993699 83994513 + 3.95855249918688 NA Intergenic Intergenic -52880 NM_027964 71861 Mm.116957 NM_027964 ENSMUSG00000034552 Zswim2 1700025P14Rik|4933437F18Rik|MEX zinc finger SWIM-type containing 2 protein-coding common_peak1_17_155_-0.780716856989581_6.89504379036746_3.95855249918688 chr11 5175573 5176021 + 3.95855249918688 NA Intergenic Intergenic -23575 NM_080595 140703 Mm.840 NM_080595 ENSMUSG00000034164 Emid1 AW122071|CO-5|Emu1 EMI domain containing 1 protein-coding common_peak1_17_155_-0.780716856989581_6.89504379036746_3.95855249918688-3 chr7 114087629 114087992 + 3.95855249918688 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 29971 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak1_17_155_-0.780716856989581_6.89504379036746_3.95855249918688-2 chr16 78198307 78198754 + 3.95855249918688 NA Intergenic MLT1F1|LTR|ERVL-MaLR 56924 NR_045698 100503619 Mm.387531 NR_045698 ENSMUSG00000109841 E330011O21Rik - RIKEN cDNA E330011O21 gene ncRNA common_peak1_84_475_0.356824084544549_9.07322980558022_3.95797328922832 chr7 66194121 66195574 + 3.95797328922832 NA Intergenic Intergenic 85332 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_42_178_0.561911392989694_7.7647714737591_3.95784213146361 chr12 40380690 40382201 + 3.95784213146361 NA intron (NM_178845, intron 1 of 11) intron (NM_178845, intron 1 of 11) 64345 NM_172575 246196 Mm.26852 NM_172575 ENSMUSG00000055917 Zfp277 2410017E24Rik|NIRF4 zinc finger protein 277 protein-coding unique_peak2_12_115_-0.929172061672995_6.39339496429107_3.95745127355646-3 chr9 69439691 69440452 + 3.95745127355646 NA Intergenic Intergenic -13612 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding common_peak1_12_115_-0.929172061672995_6.39339496429107_3.95745127355646 chr8 113678979 113679325 + 3.95745127355646 NA Intergenic MTC|LTR|ERVL-MaLR 35939 NM_001048145 668110 Mm.390078 NM_029139 ENSMUSG00000033409 Syce1l 4930481F22Rik|MMRP|PSESS|mmrp2 synaptonemal complex central element protein 1 like protein-coding unique_peak2_12_115_-0.929172061672995_6.39339496429107_3.95745127355646 chr7 3290459 3291231 + 3.95745127355646 NA intron (NM_001093765, intron 1 of 2) intron (NM_001093765, intron 1 of 2) 289 NM_001093765 50918 Mm.29874 NM_016969 ENSMUSG00000068566 Myadm D7Wsu62e myeloid-associated differentiation marker protein-coding unique_peak2_12_115_-0.929172061672995_6.39339496429107_3.95745127355646-2 chr7 80342977 80343619 + 3.95745127355646 NA intron (NM_026812, intron 1 of 3) CpG 161 NM_026812 68695 Mm.21171 NM_026812 ENSMUSG00000030532 Hddc3 1110033O09Rik|C86475|MESH1 HD domain containing 3 protein-coding common_peak2_97_578_0.326069010107805_9.34045404304314_3.95644239657341 chr1 72254167 72255760 + 3.95644239657341 NA Intergenic CpG 29351 NM_023523 111175 Mm.281738 NM_023523 ENSMUSG00000026189 Pecr 2400003B18Rik|TERP peroxisomal trans-2-enoyl-CoA reductase protein-coding common_peak1_45_197_0.535716495200256_7.89721486767974_3.95634377762486 chr2 76369777 76370393 + 3.95634377762486 NA 5' UTR (NM_153405, exon 1 of 10) 5' UTR (NM_153405, exon 1 of 10) 101 NM_153405 241490 Mm.33310 NM_153405 ENSMUSG00000042369 Rbm45 Drb1|Drbp1|G430095G15Rik RNA binding motif protein 45 protein-coding common_peak2_72_645_-0.353071328308296_9.15885469053978_3.95503496770227 chr9 118053722 118056284 + 3.95503496770227 NA intron (NM_013727, intron 5 of 7) intron (NM_013727, intron 5 of 7) 14481 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_72_645_-0.353071328308296_9.15885469053978_3.95503496770227-2 chr9 120582131 120583791 + 3.95503496770227 NA Intergenic Intergenic 5630 NR_073359 76100 Mm.48212 NR_073359 ENSMUSG00000052658 5830454E08Rik - RIKEN cDNA 5830454E08 gene ncRNA unique_peak2_96_570_0.327991428000566_9.32134264936313_3.95494689639524 chr6 47654573 47656361 + 3.95494689639524 NA promoter-TSS (NR_002841).2 promoter-TSS (NR_002841).2 -373 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_193_1923_-0.197942409220277_10.8109218791599_3.95412120476506 chr10 19577814 19579642 + 3.95412120476506 NA Intergenic Intergenic -13230 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak2_35_305_-0.526090169633628_7.99434275787584_3.95358049203906 chr9 41212204 41213428 + 3.95358049203906 NA intron (NR_040392, intron 2 of 4) intron (NR_040392, intron 2 of 4) 6661 NR_040392 78500 Mm.275715 NR_040392 ENSMUSG00000100837 1700063D05Rik - RIKEN cDNA 1700063D05 gene ncRNA common_peak1_35_305_-0.526090169633628_7.99434275787584_3.95358049203906 chr6 67414879 67415370 + 3.95358049203906 NA Intergenic Lx8|LINE|L1 -38987 NM_008354 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding unique_peak2_27_237_-0.608253013290018_7.59069125666293_3.95234134175657 chr17 8015761 8017233 + 3.95234134175657 NA Intergenic Intergenic 70883 NM_025789 66832 Mm.29830 NM_025789 ENSMUSG00000073471 Rsph3a 1700012G05Rik|4930524H12Rik|R74860|Rshl2|Rshl2a radial spoke 3A homolog (Chlamydomonas) protein-coding unique_peak2_6_69_-1.29594288929975_5.48131157229509_3.95194335281-3 chr6 124409864 124410581 + 3.95194335281 NA intron (NM_175933, intron 5 of 14) B3|SINE|B2 4641 NM_001277330 19305 Mm.22418 NM_008995 ENSMUSG00000005069 Pex5 AW212715|ESTM1|PTS1R|Pxr1|X83306 peroxisomal biogenesis factor 5 protein-coding unique_peak2_6_69_-1.29594288929975_5.48131157229509_3.95194335281-2 chr3 159230009 159230588 + 3.95194335281 NA intron (NR_040750, intron 3 of 4) IAPEz-int|LTR|ERVK 153934 NR_040750 624759 Mm.491054 NR_040750 ENSMUSG00000106053 Gm20752 - predicted gene, 20752 ncRNA unique_peak2_6_69_-1.29594288929975_5.48131157229509_3.95194335281 chr14 75832166 75832843 + 3.95194335281 NA Intergenic B2_Mm2|SINE|B2 12460 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA common_peak1_467_5356_-0.116906992585783_12.3287560844267_3.95185206709472 chr2 30623062 30627518 + 3.95185206709472 NA Intergenic Intergenic 30246 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding common_peak2_53_249_0.483035593363864_8.20730208134402_3.94937081324718 chr3 108591054 108592149 + 3.94937081324718 NA intron (NM_181400, intron 1 of 14) CpG 323 NM_181400 99512 Mm.285968 NM_181400 ENSMUSG00000040389 Wdr47 1810073M12Rik|AA552998|mKIAA0893 WD repeat domain 47 protein-coding common_peak1_40_349_-0.489767846766903_8.20632718844888_3.94937081324708 chr2 22803894 22804544 + 3.94937081324708 NA intron (NM_019456, intron 1 of 13) L2a|LINE|L2 29892 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak1_40_349_-0.489767846766903_8.20632718844888_3.94937081324708-2 chr6 31081483 31082188 + 3.94937081324708 NA Intergenic B1F1|SINE|Alu -18742 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_21_187_-0.694791108983686_7.20719329718579_3.94750941829975 chr2 11188220 11188724 + 3.94750941829975 NA intron (NM_008859, intron 1 of 17) C-rich|Low_complexity|Low_complexity 16090 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_21_187_-0.694791108983686_7.20719329718579_3.94750941829975-2 chrX 160137396 160137832 + 3.94750941829975 NA intron (NM_008810, intron 1 of 10) intron (NM_008810, intron 1 of 10) 816 NM_008810 18597 Mm.34775 NM_008810 ENSMUSG00000031299 Pdha1 Pdha-1 pyruvate dehydrogenase E1 alpha 1 protein-coding common_peak1_317_2762_0.154468745970259_11.5092542197976_3.94740743568005 chr7 102209237 102211241 + 3.94740743568005 NA promoter-TSS (NM_001287164) promoter-TSS (NM_001287164) -73 NM_001287164 269966 Mm.439800 NM_022979 ENSMUSG00000063550 Nup98 4732457F17|AI849286|Nup96 nucleoporin 98 protein-coding common_peak2_121_1137_-0.261153080073253_10.02170830227_3.94435312115121 chr1 40521514 40525402 + 3.94435312115121 NA intron (NM_010553, intron 3 of 12) intron (NM_010553, intron 3 of 12) 8096 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_46_403_-0.455080395325778_8.43067128508891_3.94431028658144 chrX 50874541 50875545 + 3.94431028658144 NA intron (NM_001313744, intron 3 of 11) intron (NM_001313744, intron 3 of 11) 33672 NM_001313744 70415 Mm.46254 NM_133729 ENSMUSG00000031112 Stk26 2610018G03Rik|Mst4 serine/threonine kinase 26 protein-coding common_peak1_165_1609_-0.216726792647275_10.5444815766783_3.94357088354989 chr1 66817060 66818221 + 3.94357088354989 NA promoter-TSS (NM_177645) promoter-TSS (NM_177645) -45 NM_001122738 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding common_peak1_16_147_-0.805917104654778_6.80649481330156_3.94303338871563 chr1 36690895 36691362 + 3.94303338871563 NA promoter-TSS (NM_009942) promoter-TSS (NM_009942) -359 NM_009942 12859 Mm.180182 NM_009942 ENSMUSG00000061518 Cox5b - cytochrome c oxidase subunit Vb protein-coding common_peak1_16_147_-0.805917104654778_6.80649481330156_3.94303338871563-2 chr13 60935174 60935538 + 3.94303338871563 NA exon (NM_007796, exon 4 of 5) exon (NM_007796, exon 4 of 5) 1210 NM_001145799 13024 Mm.482089 NM_007796 ENSMUSG00000044258 Ctla2a Ctla-2a cytotoxic T lymphocyte-associated protein 2 alpha protein-coding common_peak1_533_5375_0.111447773325068_12.4480413094413_3.94253030018542 chr12 51863910 51867868 + 3.94253030018542 NA Intergenic Intergenic -36353 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak2_122_788_0.281696291205252_9.76472963561609_3.9414310738951 chr5 121618339 121619844 + 3.9414310738951 NA promoter-TSS (NM_178799) promoter-TSS (NM_178799) -153 NM_178799 338350 Mm.482918 NM_178799 ENSMUSG00000042647 Acad12 9330129D05Rik acyl-Coenzyme A dehydrogenase family, member 12 protein-coding common_peak2_150_1038_0.24754044608134_10.1447501619449_3.94136472399501 chr9 110456970 110460238 + 3.94136472399501 NA intron (NM_177771, intron 1 of 9) B1_Mur2|SINE|Alu 18090 NM_177771 270201 Mm.41744 NM_177771 ENSMUSG00000054792 Klhl18 A930041K15|AW545966 kelch-like 18 protein-coding common_peak1_43_376_-0.472010659388356_8.32241538357449_3.94123497188194 chr2 94437428 94438244 + 3.94123497188194 NA intron (NM_001305258, intron 1 of 13) CpG 350 NM_007466 11800 Mm.181824 NM_007466 ENSMUSG00000027193 Api5 AAC-11|AI196452|API-5 apoptosis inhibitor 5 protein-coding common_peak1_22_67_0.850997962843171_6.51296182267192_3.93888547878418 chr14 66845723 66846255 + 3.93888547878418 NA intron (NM_009955, intron 3 of 13) intron (NM_009955, intron 3 of 13) 22611 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding unique_peak2_13_123_-0.894243871555305_6.50707437460922_3.93888547878416-2 chr2 92202092 92203108 + 3.93888547878416 NA intron (NM_001109691, intron 2 of 18) intron (NM_001109691, intron 2 of 18) 10623 NR_035480 100316756 NR_035480 ENSMUSG00000088639 Mir1955 mir-1955|mmu-mir-1955 microRNA 1955 ncRNA unique_peak2_13_123_-0.894243871555305_6.50707437460922_3.93888547878416 chr18 81927132 81927984 + 3.93888547878416 NA Intergenic Intergenic 64522 NR_039589 100628596 NR_039589 ENSMUSG00000093036 Mir5127 mmu-mir-5127|mu-mir-5127 microRNA 5127 ncRNA common_peak1_29_254_-0.585697004261155_7.70150493472828_3.93870561764434 chr10 19099250 19099864 + 3.93870561764434 NA Intergenic Intergenic -42192 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_29_254_-0.585697004261155_7.70150493472828_3.93870561764434 chr9 109875339 109876643 + 3.93870561764434 NA exon (NM_007658, exon 1 of 15) exon (NM_007658, exon 1 of 15) 412 NM_007658 12530 Mm.307103 NM_007658 ENSMUSG00000032477 Cdc25a D9Ertd393e cell division cycle 25A protein-coding common_peak1_29_254_-0.585697004261155_7.70150493472828_3.93870561764434-2 chr3 106483919 106484556 + 3.93870561764434 NA intron (NR_033207, intron 1 of 1) intron (NR_033207, intron 1 of 1) 1676 NR_033207 69206 Mm.14816 NM_001033146 ENSMUSG00000091575 2010016I18Rik - RIKEN cDNA 2010016I18 gene ncRNA common_peak2_169_1653_-0.213489360132428_10.5849988391051_3.93842485131672 chr11 5540838 5542903 + 3.93842485131672 NA intron (NM_134033, intron 1 of 4) CpG 347 NM_134033 104479 Mm.210403 NM_134033 ENSMUSG00000020482 Ccdc117 1110004K02Rik|1700026O03Rik|AU018638|AU042822|AV173073|BC018601 coiled-coil domain containing 117 protein-coding common_peak1_154_1489_-0.226308823736897_10.4279422034811_3.93757921506119 chr14 121371089 121372737 + 3.93757921506119 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 7317 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_25_82_0.780381813294007_6.76523033799393_3.93750169797179 chr5 113588138 113588766 + 3.93750169797179 NA 3' UTR (NM_177292, exon 8 of 8) 3' UTR (NM_177292, exon 8 of 8) 38032 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak1_25_82_0.780381813294007_6.76523033799393_3.93750169797179-2 chr8 95141854 95142461 + 3.93750169797179 NA intron (NM_010631, intron 1 of 19) intron (NM_010631, intron 1 of 19) 383 NM_010631 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding common_peak2_25_82_0.780381813294007_6.76523033799393_3.93750169797179 chr13 52978169 52979018 + 3.93750169797179 NA intron (NM_017373, intron 1 of 1) CpG 2446 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_31_271_-0.564597266938815_7.80516420778093_3.93564980450794 chr7 114171564 114172223 + 3.93564980450794 NA Intergenic Intergenic -54112 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak2_297_2540_0.160356653240623_11.3913589866737_3.93548953093862 chr7 114316154 114319322 + 3.93548953093862 NA intron (NR_029437, intron 3 of 3) intron (NR_029437, intron 3 of 3) -41622 NM_011965 26440 Mm.121265 NM_011965 ENSMUSG00000030751 Psma1 C2|HC2|Pros-30|alpha-type proteasome (prosome, macropain) subunit, alpha type 1 protein-coding common_peak2_135_1284_-0.244179449548_10.2054629193072_3.93521727459877 chr10 127290645 127292238 + 3.93521727459877 NA intron (NM_001290183, intron 1 of 2) intron (NM_001290183, intron 1 of 2) 648 NM_001290183 13198 Mm.110220 NM_007837 ENSMUSG00000025408 Ddit3 CHOP-10|CHOP10|chop|gadd153 DNA-damage inducible transcript 3 protein-coding common_peak1_38_331_-0.502095981739065_8.12399144047739_3.93518110156691 chr16 20717826 20718536 + 3.93518110156691 NA intron (NM_145632, intron 1 of 4) intron (NM_145632, intron 1 of 4) 355 NM_145632 245841 Mm.288730 NM_145632 ENSMUSG00000021018 Polr2h - polymerase (RNA) II (DNA directed) polypeptide H protein-coding common_peak1_38_331_-0.502095981739065_8.12399144047739_3.93518110156691-2 chr4 140986722 140987472 + 3.93518110156691 NA intron (NM_029097, intron 1 of 28) CpG 224 NM_001164366 74772 Mm.205625 NM_029097 ENSMUSG00000036622 Atp13a2 1110012E06Rik|AA589443 ATPase type 13A2 protein-coding common_peak2_55_484_-0.408663875870209_8.71750899913939_3.93491785977693 chr1 171269730 171271051 + 3.93491785977693 NA promoter-TSS (NM_020579) promoter-TSS (NM_020579) 62 NM_020579 57370 Mm.274011 NM_020579 ENSMUSG00000052423 B4galt3 9530061M23Rik|AA104562|AW125175|ESTM26|ESTM6|R74981 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 protein-coding common_peak1_35_136_0.633265590098497_7.41466487800978_3.93438564856412 chr2 32536865 32537601 + 3.93438564856412 NA intron (NM_153560, intron 1 of 10) intron (NM_153560, intron 1 of 10) 1874 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding unique_peak2_35_136_0.633265590098497_7.41466487800978_3.93438564856412 chr7 127614598 127615624 + 3.93438564856412 NA promoter-TSS (NM_177226) promoter-TSS (NM_177226) -678 NM_177226 320683 Mm.156718 NM_177226 ENSMUSG00000045639 Zfp629 9330199A09Rik|Znf629 zinc finger protein 629 protein-coding common_peak1_24_212_-0.648694428089454_7.41036240618111_3.93438564856412 chr9 118167791 118168300 + 3.93438564856412 NA Intergenic Intergenic -17849 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding common_peak1_15_139_-0.833029753819798_6.71276814003507_3.93365089187212 chr12 102627821 102628230 + 3.93365089187212 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 56995 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA unique_peak2_15_139_-0.833029753819798_6.71276814003507_3.93365089187212 chr13 109229581 109230586 + 3.93365089187212 NA intron (NM_011056, intron 3 of 16) intron (NM_011056, intron 3 of 16) -94661 NR_030644 100124489 NR_030644 ENSMUSG00000076946 Mir582 Mirn582|mir-582|mmu-mir-582 microRNA 582 ncRNA common_peak2_198_1980_-0.195031371042068_10.8544974793685_3.93171352650073 chr1 85649172 85653207 + 3.93171352650073 NA intron (NM_013673, intron 1 of 19) intron (NM_013673, intron 1 of 19) 1201 NM_001313714 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding common_peak2_599_6235_0.103581429150951_12.6581959272733_3.93170494368653 chr10 79982447 79990035 + 3.93170494368653 NA intron (NR_038088, intron 1 of 4) B1_Mur3|SINE|Alu -1911 NM_001003949 216157 Mm.29442 NM_001003949 ENSMUSG00000013858 Tmem259 AC087114.7gm2|ORF61|R32184_3|mFLJ00277 transmembrane protein 259 protein-coding unique_peak2_14_131_-0.862349997947105_6.6132191203849_3.93170347593117-3 chr7 97737536 97738699 + 3.93170347593117 NA 5' UTR (NM_175105, exon 1 of 3) 5' UTR (NM_175105, exon 1 of 3) 130 NM_175105 66333 Mm.29756 NM_175105 ENSMUSG00000042797 Aqp11 1700015P13Rik|AI648923|sjds aquaporin 11 protein-coding unique_peak2_14_131_-0.862349997947105_6.6132191203849_3.93170347593117-2 chr11 75668843 75669995 + 3.93170347593117 NA intron (NM_001080775, intron 21 of 31) B2_Mm2|SINE|B2 -9840 NM_001277219 12928 Mm.280125 NM_133656 ENSMUSG00000017776 Crk Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38 v-crk avian sarcoma virus CT10 oncogene homolog protein-coding unique_peak2_14_131_-0.862349997947105_6.6132191203849_3.93170347593117 chr10 120616049 120616755 + 3.93170347593117 NA Intergenic Intergenic -139467 NM_010441 15364 Mm.157190 NM_010441 ENSMUSG00000056758 Hmga2 9430083A20Rik|HMGI-C|Hmgic|pg|pygmy high mobility group AT-hook 2 protein-coding common_peak2_108_669_0.303724950184501_9.53987976043739_3.93136877705997 chr7 6170874 6173252 + 3.93136877705997 NA promoter-TSS (NM_028316) promoter-TSS (NM_028316) -450 NM_028316 72667 Mm.274089 NM_028316 ENSMUSG00000044876 Zfp444 2810031J10Rik|6230401O10Rik|mFLJ00134 zinc finger protein 444 protein-coding common_peak2_247_2000_0.180013686387634_11.0565122950996_3.93129186796192 chr2 103680453 103684135 + 3.93129186796192 NA intron (NM_178890, intron 2 of 16) intron (NM_178890, intron 2 of 16) 78956 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak1_54_256_0.475666469192037_8.2434577837899_3.93113072978243 chr16 20301797 20302592 + 3.93113072978243 NA intron (NM_001005767, intron 1 of 9) CpG 168 NM_001005767 381038 Mm.371737 NM_001005767 ENSMUSG00000033918 Parl D16Ertd607e|PRO2207|PSARL1|PSENIP2|Psarl presenilin associated, rhomboid-like protein-coding common_peak2_67_597_-0.367240790851222_9.04038127877249_3.93085173752385 chr7 72270238 72272157 + 3.93085173752385 NA intron (NM_001024703, intron 1 of 22) L2a|LINE|L2 35398 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak2_79_712_-0.3333994164404_9.31105855822369_3.93078879123168 chrX 150477784 150478845 + 3.93078879123168 NA Intergenic Intergenic -19164 NM_001164683 382245 Mm.277309 NM_001164683 ENSMUSG00000041353 Tmem29 2700081K05Rik|6330540D07Rik|CXorf44-like transmembrane protein 29 protein-coding common_peak2_158_1532_-0.22226570006238_10.4710091316276_3.93062269418128 chr8 79027957 79031312 + 3.93062269418128 NA intron (NM_001294279, intron 1 of 14) CpG 1197 NM_178267 622675 Mm.48724 NM_178267 ENSMUSG00000071064 Zfp827 2810449M09Rik|D630040G17Rik|Znf827 zinc finger protein 827 protein-coding common_peak2_746_8233_0.0903971681536468_13.0525763173981_3.93061141280791 chr7 142392224 142401219 + 3.93061141280791 NA Intergenic Intergenic -8851 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak1_177_1742_-0.207726174175141_10.6634937670381_3.93031935872764 chr10 81105111 81106796 + 3.93031935872764 NA promoter-TSS (NM_023138) promoter-TSS (NM_023138) 6 NM_023138 26396 Mm.275436 NM_023138 ENSMUSG00000035027 Map2k2 AA589381|MEK2|MK2|Prkmk2 mitogen-activated protein kinase kinase 2 protein-coding unique_peak1_17_44_1.01283226554299_5.99826922910117_3.92970513008736 chr13 32972126 32972535 + 3.92970513008736 NA exon (NM_011454, exon 4 of 7) exon (NM_011454, exon 4 of 7) 6817 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak2_479_5517_-0.114824064010145_12.3725177093482_3.92842039443556 chr2 30622815 30628095 + 3.92842039443556 NA Intergenic Intergenic 30411 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding common_peak1_126_1189_-0.254535164021261_10.0894782761847_3.92784735589819-2 chr3 90612791 90614114 + 3.92784735589819 NA intron (NM_011313, intron 1 of 2) intron (NM_011313, intron 1 of 2) 558 NM_011313 20200 Mm.100144 NM_011313 ENSMUSG00000001025 S100a6 2A9|5B10|CALCYCLIN|Cacy|PRA S100 calcium binding protein A6 (calcyclin) protein-coding common_peak1_126_1189_-0.254535164021261_10.0894782761847_3.92784735589819 chr19 8517939 8519312 + 3.92784735589819 NA Intergenic IAPLTR3-int|LTR|ERVK -72629 NM_001164634 19879 Mm.285294 NM_031194 ENSMUSG00000063796 Slc22a8 Oat3|Roct solute carrier family 22 (organic anion transporter), member 8 protein-coding common_peak1_106_652_0.308031237809342_9.5049548004511_3.92746614287599 chr9 20459468 20460630 + 3.92746614287599 NA 5' UTR (NM_011753, exon 1 of 10) 5' UTR (NM_011753, exon 1 of 10) 111 NM_011753 22688 Mm.107441 NM_011753 ENSMUSG00000063108 Zfp26 5033428C05Rik|KRAB15|Zfp-26|Zfp70|Zfp81-rs1|mKIAA4196|mkr-3|mszf14|mszf52 zinc finger protein 26 protein-coding common_peak2_44_384_-0.462535998017632_8.35744663657345_3.92721065898461 chr3 84819876 84821843 + 3.92721065898461 NA intron (NM_001177773, intron 1 of 13) ORR1D1|LTR|ERVL-MaLR 5282 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak1_44_384_-0.462535998017632_8.35744663657345_3.92721065898461 chr11 71018763 71019444 + 3.92721065898461 NA promoter-TSS (NM_025993) promoter-TSS (NM_025993) 200 NM_001291147 116891 Mm.28131 NM_033562 ENSMUSG00000018442 Derl2 CGI-101|Derlin-2|F-lana|Flana Der1-like domain family, member 2 protein-coding common_peak1_44_384_-0.462535998017632_8.35744663657345_3.92721065898461-2 chr13 95685686 95686597 + 3.92721065898461 NA intron (NM_027711, intron 14 of 35) intron (NM_027711, intron 14 of 35) -10779 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak2_377_3454_0.1378859920158_11.8234129912835_3.92664883018307 chr1 181838848 181843811 + 3.92664883018307 NA intron (NM_133815, intron 1 of 13) intron (NM_133815, intron 1 of 13) 1072 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_391_3619_0.134939188499184_11.8892435762202_3.92632122976115 chr16 55819403 55822931 + 3.92632122976115 NA intron (NM_001159395, intron 2 of 12) intron (NM_001159395, intron 2 of 12) 971 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak2_66_340_0.41691577112555_8.62208581458695_3.92602653998804 chr4 116596961 116598440 + 3.92602653998804 NA promoter-TSS (NR_029450) promoter-TSS (NR_029450) -70 NR_029450 654318 Mm.255685 NR_029450 ENSMUSG00000085408 C530005A16Rik D930044c15rik RIKEN cDNA C530005A16 gene ncRNA common_peak2_202_1538_0.204421907449829_10.6899884700531_3.92593033523957 chr13 19394973 19396636 + 3.92593033523957 NA promoter-TSS (NM_024270) promoter-TSS (NM_024270) 9 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak1_61_540_-0.386190267906153_8.88638964987374_3.92526791985024 chr6 142561462 142562721 + 3.92526791985024 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 9265 NM_008428 16523 Mm.1482 NM_008428 ENSMUSG00000030247 Kcnj8 AI448900|Kir6.1|gnite|slmbr|sltr|uKATP-1 potassium inwardly-rectifying channel, subfamily J, member 8 protein-coding common_peak1_46_204_0.523650987920571_7.94130559346573_3.92487443436039 chr10 42193279 42193961 + 3.92487443436039 NA intron (NM_019740, intron 3 of 3) intron (NM_019740, intron 3 of 3) 83122 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding common_peak2_125_1178_-0.255126531841624_10.0757847370589_3.92480634917292 chr17 63966428 63969313 + 3.92480634917292 NA intron (NM_008000, intron 4 of 13) intron (NM_008000, intron 4 of 13) 29898 NM_008000 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding common_peak1_311_3329_-0.148526078791695_11.6270434225628_3.92431364491189 chr1 178405295 178406937 + 3.92431364491189 NA exon (NM_026626, exon 1 of 7) exon (NM_026626, exon 1 of 7) 235 NM_026626 68226 Mm.252132 NM_026626 ENSMUSG00000026495 Efcab2 1700073K01Rik|D830011E08Rik EF-hand calcium binding domain 2 protein-coding common_peak1_56_493_-0.403868512034505_8.74643297556743_3.92343722196447 chr15 5115763 5116560 + 3.92343722196447 NA promoter-TSS (NM_026069) promoter-TSS (NM_026069) -452 NM_026069 67281 Mm.10474 NM_026069 ENSMUSG00000041841 Rpl37 3110005M08Rik ribosomal protein L37 protein-coding common_peak2_393_3643_0.134411684009603_11.8985130858069_3.92333419366552 chr9 119980516 119984645 + 3.92333419366552 NA intron (NM_153287, intron 1 of 4) intron (NM_153287, intron 1 of 4) 2078 NM_153287 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak2_406_4543_-0.126582055165418_12.086456091922_3.92324507233825 chr13 5861446 5866806 + 3.92324507233825 NA intron (NM_011803, intron 1 of 3) intron (NM_011803, intron 1 of 3) 2637 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak1_51_448_-0.428538078913858_8.59630259528422_3.92267589832694 chr11 100713315 100714449 + 3.92267589832694 NA promoter-TSS (NM_029307) promoter-TSS (NM_029307) 32 NM_029307 75482 Mm.46175 NM_029307 ENSMUSG00000017832 Hspb9 1700007H20Rik heat shock protein, alpha-crystallin-related, B9 protein-coding unique_peak2_26_228_-0.616996221257349_7.53070567746827_3.92254844293324 chr6 146270863 146272335 + 3.92254844293324 NA intron (NM_019923, intron 37 of 56) intron (NM_019923, intron 37 of 56) 230624 NM_010586 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak1_139_1326_-0.239282318473947_10.2543114961332_3.92165942042189 chr18 31633870 31634943 + 3.92165942042189 NA promoter-TSS (NM_172965) promoter-TSS (NM_172965) 23 NM_172965 269003 Mm.194538 NM_172965 ENSMUSG00000024260 Sap130 2610304F09Rik|6720406D06 Sin3A associated protein protein-coding common_peak1_86_780_-0.316380907476127_9.45098828440392_3.92097700363234 chr11 79022898 79024220 + 3.92097700363234 NA promoter-TSS (NR_045873) promoter-TSS (NR_045873) -38 NR_045873 790910 Mm.440410 NR_045873 Gm11201 ENSMUSG00000072637|OTTMUSG00000000169 predicted gene 11201 ncRNA common_peak1_43_185_0.547251242772276_7.81278443249417_3.91954623404133 chr6 149408663 149409583 + 3.91954623404133 NA 5' UTR (NM_009753, exon 1 of 9) 5' UTR (NM_009753, exon 1 of 9) 139 NM_009753 12121 Mm.177181 NM_009753 ENSMUSG00000003452 Bicd1 B830009D06Rik|bic-D 1 bicaudal D homolog 1 (Drosophila) protein-coding common_peak1_41_358_-0.483753078838197_8.24596349440395_3.91921736178085 chr2 166701467 166702255 + 3.91921736178085 NA intron (NR_105783, intron 2 of 2) intron (NR_105783, intron 2 of 2) 11971 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding common_peak2_163_1160_0.233515630572573_10.2979100721519_3.91911498167175 chr11 58198865 58200841 + 3.91911498167175 NA intron (NM_018738, intron 1 of 2) intron (NM_018738, intron 1 of 2) 297 NM_018738 16145 Mm.33902 NM_018738 ENSMUSG00000078853 Igtp AW558444|Irgm3 interferon gamma induced GTPase protein-coding common_peak2_225_2291_-0.180259519398147_11.0722615690578_3.91865420153237 chr9 45905685 45907999 + 3.91865420153237 NA promoter-TSS (NM_001310840) promoter-TSS (NM_001310840) 35 NM_178709 235315 Mm.3255 NM_178709 ENSMUSG00000042790 Rnf214 D130054N24Rik ring finger protein 214 protein-coding common_peak1_145_1391_-0.234012158276743_10.3259374167104_3.91834632912691 chr2 167656287 167657594 + 3.91834632912691 NA intron (NM_145538, intron 1 of 5) intron (NM_145538, intron 1 of 5) 4604 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding unique_peak1_12_24_1.28495274367985_5.28633256161465_3.91816067812284-2 chr16 18732975 18733254 + 3.91816067812284 NA Intergenic Intergenic -43733 NM_013805 12741 Mm.22768 NM_013805 ENSMUSG00000041378 Cldn5 AI854493|MBEC1|Tmvcf claudin 5 protein-coding common_peak1_12_24_1.28495274367985_5.28633256161465_3.91816067812284 chr14 100209841 100210217 + 3.91816067812284 NA Intergenic Intergenic -60233 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding unique_peak1_12_24_1.28495274367985_5.28633256161465_3.91816067812284 chr13 20798751 20799103 + 3.91816067812284 NA intron (NM_001281854, intron 1 of 4) RSINE1|SINE|B4 4814 NM_012054 27052 Mm.314046 NM_012054 ENSMUSG00000021322 Aoah 4930433E13Rik acyloxyacyl hydrolase protein-coding unique_peak1_12_24_1.28495274367985_5.28633256161465_3.91816067812284-3 chr16 38407802 38408171 + 3.91816067812284 NA intron (NM_134102, intron 6 of 10) intron (NM_134102, intron 6 of 10) 25159 NM_134102 85031 Mm.279805 NM_134102 ENSMUSG00000002847 Pla1a AA986889|Ps-pla1|Pspla1 phospholipase A1 member A protein-coding common_peak1_94_860_-0.301399637121632_9.59916960883603_3.91791357210598 chr5 124328077 124328875 + 3.91791357210598 NA promoter-TSS (NM_001081323) promoter-TSS (NM_001081323) 387 NM_001134717 72650 Mm.121658 NM_028310 ENSMUSG00000047635 2810006K23Rik - RIKEN cDNA 2810006K23 gene protein-coding common_peak2_90_820_-0.308893369057758_9.52679172724893_3.91701487726967 chr7 99482264 99484372 + 3.91701487726967 NA promoter-TSS (NR_002172) promoter-TSS (NR_002172) -386 NR_002172 449630 Mm.454449 NR_002172 ENSMUSG00000065822 Snord15a EG449630|Gm5774|RNU15A|Rnu15-a|U15A small nucleolar RNA, C/D box 15A snoRNA common_peak1_131_1241_-0.247904888186891_10.154497014127_3.91583448317352 chr10 61451591 61452857 + 3.91583448317352 NA intron (NM_010124, intron 1 of 2) CpG 445 NM_010124 13688 Mm.259516 NM_010124 ENSMUSG00000020091 Eif4ebp2 2810011I19Rik|4E-BP2|AA792569|BC010348|PHAS-II eukaryotic translation initiation factor 4E binding protein 2 protein-coding common_peak2_123_1157_-0.257512710882217_10.0486631825481_3.91574588850164 chr3 96196747 96199056 + 3.91574588850164 NA promoter-TSS (NM_026975) promoter-TSS (NM_026975) -315 NM_026975 69168 Mm.104531 NM_026975 ENSMUSG00000015943 Bola1 1810037G04Rik bolA-like 1 (E. coli) protein-coding unique_peak1_21_62_0.882517819194034_6.41853883309693_3.9150203120838 chr1 127414106 127414651 + 3.9150203120838 NA intron (NM_145128, intron 12 of 17) PB1|SINE|Alu 209392 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_21_62_0.882517819194034_6.41853883309693_3.9150203120838 chr11 21241334 21241895 + 3.9150203120838 NA intron (NM_001290628, intron 1 of 22) intron (NM_001290628, intron 1 of 22) 2582 NM_001290628 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak1_21_62_0.882517819194034_6.41853883309693_3.9150203120838-2 chrX 135724160 135724636 + 3.9150203120838 NA Intergenic Intergenic -3725 NM_030106 78478 Mm.391317 NM_030106 ENSMUSG00000060726 Tmsb15a 1700129I15Rik|Tb15a|Tmsbl1|Tmsl8 thymosin beta 15a protein-coding common_peak2_33_125_0.65286864866061_7.30371424783022_3.91476317997388 chr9 116083565 116084529 + 3.91476317997388 NA Intergenic Intergenic 91316 NM_029575 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_33_125_0.65286864866061_7.30371424783022_3.91476317997388 chr7 140982003 140982716 + 3.91476317997388 NA Intergenic Intergenic 14283 NM_001112715 68713 Mm.175661 NM_026820 ENSMUSG00000025491 Ifitm1 1110036C17Rik|DSPA2a|Mil-2|Mil2 interferon induced transmembrane protein 1 protein-coding common_peak2_55_263_0.468782941845827_8.27878559028137_3.91446838510471-2 chr4 119733089 119734446 + 3.91446838510471 NA Intergenic CpG -74822 NM_008191 14916 Mm.278 NM_008191 ENSMUSG00000032978 Guca2b AV066530|Gcap2|Ugn guanylate cyclase activator 2b (retina) protein-coding common_peak2_55_263_0.468782941845827_8.27878559028137_3.91446838510471 chr1 53837771 53839336 + 3.91446838510471 NA intron (NM_001001883, intron 23 of 28) intron (NM_001001883, intron 23 of 28) -10871 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA common_peak1_55_263_0.468782941845827_8.27878559028137_3.91446838510471 chr12 91585494 91586206 + 3.91446838510471 NA intron (NM_175335, intron 2 of 8) MTA_Mm|LTR|ERVL-MaLR 3799 NM_031391 83602 Mm.275728 NM_031391 ENSMUSG00000020962 Gtf2a1 6330549H03Rik|AA536742|AA959775|AW060250|TfIIAa/b|Tfiia1 general transcription factor II A, 1 protein-coding common_peak2_79_437_0.369571790402315_8.95957295480233_3.91376783579355 chr9 42263627 42264953 + 3.91376783579355 NA promoter-TSS (NM_172769) promoter-TSS (NM_172769) 10 NM_172769 235293 Mm.32700 NM_172769 ENSMUSG00000032018 Sc5d A830037K02|A830073K23Rik|Sc5dl sterol-C5-desaturase protein-coding common_peak1_122_1146_-0.258071894797114_10.0346137286173_3.91311608916099 chr2 165321218 165323234 + 3.91311608916099 NA intron (NM_080287, intron 1 of 20) intron (NM_080287, intron 1 of 20) -1400 NM_001302752 140579 Mm.35064 NM_080287 ENSMUSG00000017670 Elmo2 1190002F24Rik|CED-12 engulfment and cell motility 2 protein-coding common_peak1_20_179_-0.714378452531177_7.13466387006409_3.9131100987178-3 chr7 28766894 28767250 + 3.9131100987178 NA promoter-TSS (NM_010908) promoter-TSS (NM_010908) 320 NM_001122766 64383 Mm.272443 NM_022432 ENSMUSG00000015149 Sirt2 5730427M03Rik|SIR2L2|Sir2l sirtuin 2 protein-coding common_peak1_20_179_-0.714378452531177_7.13466387006409_3.9131100987178-2 chr2 173083356 173083804 + 3.9131100987178 NA Intergenic Intergenic 35945 NM_001081387 664799 Mm.389396 NM_001081387 ENSMUSG00000070495 Ctcfl Boris|OTTMUSG00000016680 CCCTC-binding factor (zinc finger protein)-like protein-coding common_peak1_20_179_-0.714378452531177_7.13466387006409_3.9131100987178 chr1 127315519 127316017 + 3.9131100987178 NA intron (NM_145128, intron 3 of 17) intron (NM_145128, intron 3 of 17) 110782 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_36_314_-0.519424367175869_8.03949583479934_3.91291570285561 chr15 88819490 88820078 + 3.91291570285561 NA promoter-TSS (NM_001142357) promoter-TSS (NM_001142357) 138 NM_029720 76737 Mm.292567 NM_029720 ENSMUSG00000023272 Creld2 5730592L21Rik|C85758 cysteine-rich with EGF-like domains 2 protein-coding common_peak1_23_203_-0.6586498738794_7.34310040503179_3.91291309135105 chr11 48855858 48856403 + 3.91291309135105 NA Intergenic Intergenic 15216 NM_008326 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47 immunity-related GTPase family M member 1 protein-coding common_peak2_63_558_-0.37722658734531_8.93809117917053_3.91212336549136 chr10 12918414 12920266 + 3.91212336549136 NA intron (NR_038027, intron 3 of 3) intron (NR_038027, intron 3 of 3) 3787 NR_038027 320273 Mm.417706 NR_038027 ENSMUSG00000097378 B230208H11Rik - RIKEN cDNA B230208H11 gene ncRNA common_peak2_67_348_0.40967765713723_8.65192205477827_3.91181060185726 chr10 76344729 76346656 + 3.91181060185726 NA promoter-TSS (NM_001081419) promoter-TSS (NM_001081419) -401 NM_001081419 64451 Mm.33183 NM_001081419 ENSMUSG00000020231 Dip2a 4931420H10Rik|AI426328|Dip2|Kiaa0184-hp|mKIAA0184 disco interacting protein 2 homolog A protein-coding common_peak2_100_603_0.318443454280379_9.39762646646527_3.91152141156504 chr18 80933213 80934638 + 3.91152141156504 NA exon (NM_015805, exon 1 of 29) exon (NM_015805, exon 1 of 29) 133 NM_001201569 50771 Mm.247138 NM_015805 ENSMUSG00000024566 Atp9b AA934181|Atpc2b|IIb|MMR ATPase, class II, type 9B protein-coding common_peak2_47_210_0.519288590571266_7.98074348399282_3.91031642317952 chr18 39250308 39251683 + 3.91031642317952 NA intron (NM_175164, intron 17 of 22) intron (NM_175164, intron 17 of 22) 236250 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak2_34_296_-0.532873406277233_7.94788241766215_3.91024515370403 chr10 75833600 75835724 + 3.91024515370403 NA 5' UTR (NM_010361, exon 1 of 5) 5' UTR (NM_010361, exon 1 of 5) 219 NM_010361 14872 Mm.24118 NM_010361 ENSMUSG00000033318 Gstt2 AI266894|Yrs|mGSTT2 glutathione S-transferase, theta 2 protein-coding common_peak2_34_296_-0.532873406277233_7.94788241766215_3.91024515370403 chr5 21645723 21646653 + 3.91024515370403 NA promoter-TSS (NM_001199632) promoter-TSS (NM_001199632) 204 NM_026034 67211 Mm.260782 NM_026034 ENSMUSG00000038525 Armc10 2810037C14Rik|Svh armadillo repeat containing 10 protein-coding common_peak1_34_296_-0.532873406277233_7.94788241766215_3.91024515370403 chr11 11529039 11529661 + 3.91024515370403 NA Intergenic Intergenic 40084 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak1_34_296_-0.532873406277233_7.94788241766215_3.91024515370403-2 chr9 32922976 32923603 + 3.91024515370403 NA intron (NR_131058, intron 1 of 3) intron (NR_131058, intron 1 of 3) 5677 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak2_99_595_0.320071294046933_9.37920416748563_3.90886022527559 chr5 145083322 145084745 + 3.90886022527559 NA intron (NM_019767, intron 1 of 9) CpG 164 NM_019767 56443 Mm.371610 NM_019767 ENSMUSG00000029621 Arpc1a 0610010H08Rik|1110030K07Rik|41kDa|AA407347|Sid32|Sid329 actin related protein 2/3 complex, subunit 1A protein-coding common_peak1_38_154_0.596819044333623_7.57453392744105_3.90866042552505 chr5 92309333 92310167 + 3.90866042552505 NA intron (NM_172713, intron 1 of 21) CpG 274 NM_172713 231452 Mm.86564 NM_172713 ENSMUSG00000029415 Sdad1 4931421J16|AA591032|AW538460 SDA1 domain containing 1 protein-coding common_peak2_29_103_0.708216714456611_7.0545480753694_3.90836694874376 chr5 149016058 149016815 + 3.90836694874376 NA Intergenic Intergenic 9474 NR_040429 100503307 Mm.188008 NR_040429 ENSMUSG00000086610 Gm15408 OTTMUSG00000021225 predicted gene 15408 ncRNA common_peak1_29_103_0.708216714456611_7.0545480753694_3.90836694874376 chr3 89390104 89390650 + 3.90836694874376 NA intron (NM_009565, intron 1 of 2) intron (NM_009565, intron 1 of 2) -1487 NR_040403 545539 Mm.393389 NR_040403 ENSMUSG00000074466 Gm15417 ENSMUSG00000074466|OTTMUSG00000021274 predicted gene 15417 ncRNA common_peak1_19_170_-0.726718287255122_7.05449337125834_3.90836694874376 chr7 114301913 114302280 + 3.90836694874376 NA Intergenic Intergenic -25980 NM_011965 26440 Mm.121265 NM_011965 ENSMUSG00000030751 Psma1 C2|HC2|Pros-30|alpha-type proteasome (prosome, macropain) subunit, alpha type 1 protein-coding common_peak1_200_1519_0.204822607972059_10.672266912317_3.90809088707747 chr10 126978060 126979829 + 3.90809088707747 NA 5' UTR (NM_001113470, exon 1 of 8) 5' UTR (NM_001113470, exon 1 of 8) 227 NM_001113470 52468 Mm.29490 NM_146012 ENSMUSG00000078429 Ctdsp2 AI586070|D10Ertd73e|OS-4|OS4|SCP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein-coding common_peak1_114_720_0.292710941731007_9.64021092010633_3.90637540083791 chr4 133679366 133681151 + 3.90637540083791 NA 3' UTR (NM_001080819, exon 20 of 20) 3' UTR (NM_001080819, exon 20 of 20) -7611 NM_001145956 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak2_192_1440_0.209950672271511_10.5978299563105_3.90558619089323 chr4 46484572 46487148 + 3.90558619089323 NA Intergenic Intergenic -3469 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding common_peak1_31_114_0.677375523367149_7.18417781262795_3.90515449491885 chr11 106762864 106763413 + 3.90515449491885 NA intron (NR_073165, intron 6 of 9) intron (NR_073165, intron 6 of 9) 11912 NM_001033435 380732 Mm.343952 NM_001033435 ENSMUSG00000040528 Milr1 Allergin-1|Gm885|Mca32 mast cell immunoglobulin like receptor 1 protein-coding common_peak1_156_1095_0.239443551445122_10.2177538586831_3.90472195681683 chr8 104442246 104443142 + 3.90472195681683 NA intron (NM_001013380, intron 1 of 12) CpG-14406 353 NM_001013380 234663 Mm.289583 NM_001013380 ENSMUSG00000035770 Dync1li2 AA409702|C920003I06|Dncli2|Dnclic2|LIC2 dynein, cytoplasmic 1 light intermediate chain 2 protein-coding unique_peak2_28_245_-0.593851190826672_7.6455889099259_3.90419187305311 chr4 132771015 132771971 + 3.90419187305311 NA intron (NM_011284, intron 3 of 8) B1_Mus1|SINE|Alu 3133 NM_011284 19891 Mm.2870 NM_011284 ENSMUSG00000028884 Rpa2 AA409079|AI325195|AU020965|RPA34|Rf-A2 replication protein A2 protein-coding common_peak2_28_245_-0.593851190826672_7.6455889099259_3.90419187305311 chr5 28070480 28071250 + 3.90419187305311 NA promoter-TSS (NM_153526) promoter-TSS (NM_153526) -547 NM_153526 231070 Mm.30221 NM_153526 ENSMUSG00000045294 Insig1 1810013C12Rik|Insig-1 insulin induced gene 1 protein-coding common_peak1_61_305_0.435906673228011_8.47534117930666_3.90311691759558 chr15 64205495 64206500 + 3.90311691759558 NA intron (NM_001276462, intron 2 of 27) intron (NM_001276462, intron 2 of 27) 106676 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_42_366_-0.473909082589262_8.28268171154858_3.90289505620533 chr6 128761917 128762553 + 3.90289505620533 NA Intergenic Intergenic 26406 NM_008527 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak1_39_340_-0.495881390207041_8.16568723392065_3.90146076749701 chr16 95990978 95991749 + 3.90146076749701 NA promoter-TSS (NM_019537) promoter-TSS (NM_019537) -460 NM_019537 56088 Mm.396248 NM_019537 ENSMUSG00000022913 Psmg1 AW552102|Dscr2 proteasome (prosome, macropain) assembly chaperone 1 protein-coding common_peak1_39_340_-0.495881390207041_8.16568723392065_3.90146076749701-2 chr18 80599784 80600639 + 3.90146076749701 NA Intergenic Intergenic -55665 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_95_563_0.327448738066014_9.3032757214318_3.90093247610432 chr11 59397381 59399700 + 3.90093247610432 NA Intergenic Intergenic -22887 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak2_32_279_-0.551963069284088_7.85330148230292_3.90008058559756 chr4 117182069 117183314 + 3.90008058559756 NA promoter-TSS (NM_134471) promoter-TSS (NM_134471) -67 NM_134471 73804 Mm.247651 NM_134471 ENSMUSG00000028678 Kif2c 4930402F02Rik|ESTM5|Knsl6|MCAK|X83316 kinesin family member 2C protein-coding common_peak1_32_279_-0.551963069284088_7.85330148230292_3.90008058559756-2 chr2 90846604 90847115 + 3.90008058559756 NA promoter-TSS (NM_019758) promoter-TSS (NM_019758) -296 NM_019758 56428 Mm.28023 NM_019758 ENSMUSG00000027282 Mtch2 2310034D24Rik|4930539J07Rik|HSPC032 mitochondrial carrier 2 protein-coding common_peak1_44_191_0.541216136843476_7.85557056914289_3.90008058559756 chr19 15984454 15985243 + 3.90008058559756 NA promoter-TSS (NR_045355) promoter-TSS (NR_045355) 141 NM_198019 208518 Mm.105652 NM_198019 ENSMUSG00000041491 Cep78 5730599I05Rik|D030027P05 centrosomal protein 78 protein-coding common_peak1_32_279_-0.551963069284088_7.85330148230292_3.90008058559756 chr16 96370530 96371104 + 3.90008058559756 NA intron (NM_028078, intron 2 of 7) intron (NM_028078, intron 2 of 7) 9053 NM_028078 72058 Mm.119714 NM_028078 ENSMUSG00000000159 Igsf5 2010003D20Rik|JCAM|Jam4 immunoglobulin superfamily, member 5 protein-coding unique_peak1_16_40_1.04598425635609_5.88054413279613_3.89903616648791-2 chr16 14062719 14063101 + 3.89903616648791 NA intron (NM_144518, intron 2 of 5) intron (NM_144518, intron 2 of 5) -76043 NM_001270718 74482 Mm.484026 NM_028968 ENSMUSG00000065968 Ifitm7 4933438K12Rik|Mil4 interferon induced transmembrane protein 7 protein-coding unique_peak1_16_40_1.04598425635609_5.88054413279613_3.89903616648791-4 chr5 119633480 119633929 + 3.89903616648791 NA non-coding (NR_046178, exon 4 of 4) non-coding (NR_046178, exon 4 of 4) 7762 NR_046178 330183 Mm.413133 NR_046178 ENSMUSG00000085708 Gm16063 G630008E18|OTTMUSG00000029664 predicted gene 16063 ncRNA unique_peak1_16_40_1.04598425635609_5.88054413279613_3.89903616648791 chr11 24243416 24243844 + 3.89903616648791 NA Intergenic Intergenic 162935 NM_001159290 14025 Mm.53687 NM_016707 ENSMUSG00000000861 Bcl11a 2810047E18Rik|BCL-11A|Ctip1|D930021L15Rik|Evi9|Evi9a|Evi9b|Evi9c|mKIAA1809 B cell CLL/lymphoma 11A (zinc finger protein) protein-coding unique_peak1_16_40_1.04598425635609_5.88054413279613_3.89903616648791-3 chr2 59652528 59652864 + 3.89903616648791 NA intron (NM_198294, intron 2 of 26) ORR1D2|LTR|ERVL-MaLR 5927 NM_001290659 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak1_92_539_0.334001123836758_9.24381615896921_3.89815893078679 chr6 108782979 108783811 + 3.89815893078679 NA intron (NM_026011, intron 1 of 6) CpG 336 NM_026011 67166 Mm.271178 NM_026011 ENSMUSG00000030105 Arl8b 2610313E07Rik|3100002J04Rik|Arl10c|gie1 ADP-ribosylation factor-like 8B protein-coding common_peak1_92_539_0.334001123836758_9.24381615896921_3.89815893078679-2 chr7 133637747 133638480 + 3.89815893078679 NA intron (NM_178115, intron 1 of 24) CpG 438 NM_178115 214764 Mm.174044 NM_145995 ENSMUSG00000039990 Edrf1 2700050L05Rik|AU022667|AW558805 erythroid differentiation regulatory factor 1 protein-coding common_peak1_90_523_0.338922041182597_9.20288402212875_3.89801627559715 chr3 69721965 69722824 + 3.89801627559715 NA intron (NM_133787, intron 1 of 15) CpG 339 NM_133787 97112 Mm.21062 NM_133787 ENSMUSG00000027787 Nmd3 C87860 NMD3 ribosome export adaptor protein-coding common_peak2_74_663_-0.344889723057259_9.2025945698183_3.89801627559715 chr6 130168430 130171594 + 3.89801627559715 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -9264 NR_104105 654449 Mm.439698 NM_008461 ENSMUSG00000072721 Klra14-ps EG654449|Gm15858|Klra14|Klra29|Klra31|Ly49N|OTTMUSG00000026959 killer cell lectin-like receptor subfamily A, member 14, pseudogene pseudo common_peak1_24_77_0.800612973274135_6.68570870549932_3.89664091627155 chr11 116004752 116005187 + 3.89664091627155 NA intron (NM_001005608, intron 32 of 39) CpG 7750 NM_016905 14635 Mm.2820 NM_016905 ENSMUSG00000020766 Galk1 AA409894|GALK|Gk|Glk|Glk1 galactokinase 1 protein-coding common_peak2_206_1579_0.201020993335613_10.7262193397323_3.89657319497042 chr12 75595132 75597256 + 3.89657319497042 NA promoter-TSS (NM_012024) promoter-TSS (NM_012024) 6 NM_012024 26932 Mm.259626 NM_012024 ENSMUSG00000021051 Ppp2r5e 4633401M22Rik|AI449017|B56beta protein phosphatase 2, regulatory subunit B', epsilon protein-coding common_peak2_202_1539_0.203484788195775_10.6904570296802_3.8940330661088 chr8 69973151 69975721 + 3.8940330661088 NA promoter-TSS (NM_001113346) promoter-TSS (NM_001113346) -53 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak2_252_2054_0.176919538652317_11.0933824478952_3.89319309988281 chr1 181229350 181233658 + 3.89319309988281 NA Intergenic Intergenic -19526 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak1_529_5326_0.111352097946641_12.4347836145345_3.89198653230717 chr1 171558600 171563556 + 3.89198653230717 NA intron (NM_018729, intron 1 of 8) intron (NM_018729, intron 1 of 8) 1885 NM_018729 18106 Mm.2299 NM_018729 ENSMUSG00000004709 Cd244 2B4|C9.1|F730046O15Rik|Ly90|NAIL|NKR2B4|Nmrk|SLAMF4 CD244 natural killer cell receptor 2B4 protein-coding common_peak2_277_2910_-0.158702032143808_11.4279481080509_3.89193175268079 chr10 4386018 4389223 + 3.89193175268079 NA intron (NM_001033466, intron 1 of 2) CpG 488 NM_001033466 381990 Mm.262466 NM_001033466 ENSMUSG00000075327 Zbtb2 Gm1103 zinc finger and BTB domain containing 2 protein-coding common_peak1_211_2127_-0.186316047685365_10.9621244116585_3.89178731531653 chr6 48663995 48666286 + 3.89178731531653 NA Intergenic Intergenic -10995 NM_174960 317758 Mm.116971 NM_174960 ENSMUSG00000051124 Gimap9 A630002K24|BB145400 GTPase, IMAP family member 9 protein-coding common_peak1_117_1094_-0.264576438260354_9.96442693535836_3.89160117738893 chr14 52103268 52104111 + 3.89160117738893 NA intron (NM_001170983, intron 1 of 8) CpG 339 NM_001170982 15381 Mm.427321 NM_016884 ENSMUSG00000060373 Hnrnpc AL022939|D14Wsu171e|Hnrpc|Hnrpc1|Hnrpc2|hnRNPC1|hnRNPC2|hnrnp-C heterogeneous nuclear ribonucleoprotein C protein-coding common_peak1_54_474_-0.410492684832395_8.68653736080211_3.88999273340536 chr11 21569118 21570070 + 3.88999273340536 NA intron (NM_001316675, intron 1 of 8) intron (NM_001316675, intron 1 of 8) 2340 NM_008618 17449 Mm.212703 NM_008618 ENSMUSG00000020321 Mdh1 B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2 malate dehydrogenase 1, NAD (soluble) protein-coding common_peak1_116_1083_-0.265071075592726_9.94961350355751_3.88987224493975 chr2 57116764 57117870 + 3.88987224493975 NA intron (NM_001139509, intron 1 of 7) intron (NM_001139509, intron 1 of 7) -2279 NM_013613 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak1_37_322_-0.508413840110678_8.08118343463859_3.88874078098569 chr19 3870860 3871628 + 3.88874078098569 NA intron (NR_073190, intron 3 of 12) intron (NR_073190, intron 3 of 12) 19471 NR_073190 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak1_190_1421_0.210665756367378_10.5790386278031_3.88856211605327 chr6 24663421 24665488 + 3.88856211605327 NA intron (NM_001167745, intron 1 of 4) intron (NM_001167745, intron 1 of 4) 541 NM_001167745 73178 Mm.1574 NM_028459 ENSMUSG00000029684 Wasl 2900021I12Rik|3110031I02Rik|N-WASP Wiskott-Aldrich syndrome-like (human) protein-coding common_peak2_125_1177_-0.253902352692322_10.0751726474843_3.88837363496543 chr8 72218491 72221094 + 3.88837363496543 NA promoter-TSS (NM_026455) promoter-TSS (NM_026455) 62 NM_026455 67922 Mm.28327 NM_026455 ENSMUSG00000003039 Fam32a 2510049I19Rik|AW822030|OTAG-12|Otag12 family with sequence similarity 32, member A protein-coding common_peak1_136_913_0.260287201476789_9.96619395579646_3.88801506187606 chr5 121190559 121192009 + 3.88801506187606 NA 5' UTR (NM_001109992, exon 1 of 16) 5' UTR (NM_001109992, exon 1 of 16) 113 NM_001109992 19247 Mm.8681 NM_011202 ENSMUSG00000043733 Ptpn11 2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp protein tyrosine phosphatase, non-receptor type 11 protein-coding common_peak1_326_2866_0.150550562442398_11.5606014704617_3.88789034281885 chr4 62628782 62632001 + 3.88789034281885 NA intron (NM_019492, intron 14 of 19) intron (NM_019492, intron 14 of 19) 10719 NM_134257 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_41_173_0.561143459136127_7.72351522541679_3.88728076937816 chr5 118403855 118404437 + 3.88728076937816 NA Intergenic Intergenic -156573 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak2_289_2454_0.161873903375188_11.3424442608896_3.88721468088936 chr13 108300199 108306198 + 3.88721468088936 NA Intergenic Intergenic -13139 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak1_77_692_-0.337155781342997_9.26813365146572_3.88710824191703 chr1 185120814 185121647 + 3.88710824191703 NA Intergenic RLTR18B|LTR|ERVK -82938 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding common_peak2_370_3373_0.139033616421015_11.7897610664981_3.88571878767261 chr12 80944596 80947275 + 3.88571878767261 NA promoter-TSS (NR_045057) promoter-TSS (NR_045057) 431 NM_009159 20384 Mm.43331 NM_009159 ENSMUSG00000021134 Srsf5 Sfrs5 serine/arginine-rich splicing factor 5 protein-coding common_peak2_266_2204_0.170589944472589_11.1918579126812_3.88444130430831 chr9 89208354 89212361 + 3.88444130430831 NA promoter-TSS (NM_026829) promoter-TSS (NM_026829) -833 NM_026829 107885 Mm.486274 NM_026829 ENSMUSG00000066442 Mthfs 1110034I12Rik|2310020H23Rik|AI119695 5, 10-methenyltetrahydrofolate synthetase protein-coding common_peak2_251_2044_0.176948654495382_11.0863594550768_3.88372919542976 chr2 167957254 167961698 + 3.88372919542976 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 27149 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_48_217_0.508691912133759_8.0225302808438_3.88353082732541 chr10 40451265 40452371 + 3.88353082732541 NA intron (NM_001291817, intron 4 of 11) intron (NM_001291817, intron 4 of 11) 102510 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak2_114_1062_-0.267359490559276_9.92024613625147_3.88327659271116 chr11 120627266 120631821 + 3.88327659271116 NA exon (NM_010756, exon 3 of 3) exon (NM_010756, exon 3 of 3) 4004 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding unique_peak1_13_28_1.201971443704_5.45896671697957_3.88257373983915-4 chr5 114567602 114568009 + 3.88257373983915 NA promoter-TSS (NM_001004180) promoter-TSS (NM_001004180) -446 NM_001004180 433940 Mm.194212 NM_001004180 ENSMUSG00000041930 Fam222a - family with sequence similarity 222, member A protein-coding unique_peak1_13_28_1.201971443704_5.45896671697957_3.88257373983915-3 chr4 139229561 139229971 + 3.88257373983915 NA intron (NM_001271405, intron 1 of 8) L1MA4|LINE|L1 35655 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak1_13_28_1.201971443704_5.45896671697957_3.88257373983915-2 chr3 79174096 79174451 + 3.88257373983915 NA Intergenic Intergenic -28398 NM_001099624 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding unique_peak1_13_28_1.201971443704_5.45896671697957_3.88257373983915 chr13 21362835 21363175 + 3.88257373983915 NA intron (NM_016684, intron 1 of 3) CpG 185 NM_016684 22758 Mm.24124 NM_016684 ENSMUSG00000036721 Zscan12 2510038J07Rik|FPM315|Zfp96|mKIAA0426|zfp-96 zinc finger and SCAN domain containing 12 protein-coding common_peak1_81_730_-0.325672019700654_9.35089158610211_3.88228425942296 chr8 83593359 83594513 + 3.88228425942296 NA intron (NM_134118, intron 1 of 12) intron (NM_134118, intron 1 of 12) 555 NM_027179 106529 Mm.352239 NM_027179 ENSMUSG00000031708 Tecr 2410016D23Rik|A230102P12Rik|AI173355|D17Ertd178e|Gpsn2|SC2 trans-2,3-enoyl-CoA reductase protein-coding common_peak2_46_402_-0.45150494110195_8.42888355797699_3.88205869266148 chr5 36088536 36090405 + 3.88205869266148 NA intron (NM_030889, intron 3 of 26) intron (NM_030889, intron 3 of 26) -114551 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding common_peak1_35_304_-0.521367759391225_7.99198155275464_3.88203365259351-2 chr13 52592001 52592631 + 3.88203365259351 NA intron (NM_001198977, intron 1 of 13) B2_Mm2|SINE|B2 -4566 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak1_35_304_-0.521367759391225_7.99198155275464_3.88203365259351 chr1 74237910 74238568 + 3.88203365259351 NA intron (NM_029711, intron 1 of 9) intron (NM_029711, intron 1 of 9) 1689 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak1_18_162_-0.748363950834187_6.97454617881398_3.8814505553229 chr5 53994960 53995469 + 3.8814505553229 NA Intergenic Intergenic -3309 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding unique_peak2_18_162_-0.748363950834187_6.97454617881398_3.8814505553229 chr10 127001966 127002925 + 3.8814505553229 NA intron (NM_009635, intron 1 of 19) intron (NM_009635, intron 1 of 19) 1736 NM_009635 11567 Mm.10739 NM_009635 ENSMUSG00000025432 Avil Advil|DOC6 advillin protein-coding common_peak1_26_87_0.762775948202298_6.84081959273845_3.87980524266694 chr3 79202670 79203194 + 3.87980524266694 NA Intergenic Intergenic -9987 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak2_26_87_0.762775948202298_6.84081959273845_3.87980524266694 chr4 126162739 126163366 + 3.87980524266694 NA promoter-TSS (NM_025856) promoter-TSS (NM_025856) 289 NM_001162533 66938 Mm.29813 NM_025856 ENSMUSG00000073758 Sh3d21 1700029G01Rik|AU019788 SH3 domain containing 21 protein-coding common_peak1_26_87_0.762775948202298_6.84081959273845_3.87980524266694-2 chr3 135608014 135608553 + 3.87980524266694 NA exon (NM_008689, exon 13 of 25) exon (NM_008689, exon 13 of 25) 83264 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_26_87_0.762775948202298_6.84081959273845_3.87980524266694-3 chr5 115235430 115236000 + 3.87980524266694 NA promoter-TSS (NM_026398) promoter-TSS (NM_026398) -136 NM_026398 117109 Mm.24636 NM_026398 ENSMUSG00000060152 Pop5 1500019J17Rik|2700077E03Rik|AW049989|Rnasep3 processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae) protein-coding common_peak1_15_36_1.08679989749622_5.75285331437706_3.87865809592368 chr14 54234970 54235410 + 3.87865809592368 NA TTS (NM_001113358) TTS (NM_001113358) 18739 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak1_15_36_1.08679989749622_5.75285331437706_3.87865809592368 chr2 5800962 5801259 + 3.87865809592368 NA intron (NM_133837, intron 10 of 12) intron (NM_133837, intron 10 of 12) 43850 NM_133837 98828 Mm.181490 NM_133837 ENSMUSG00000039128 Cdc123 AA959893|G431001I09Rik cell division cycle 123 protein-coding common_peak1_106_653_0.30582359385769_9.50605862242693_3.87857505922121 chr2 29638497 29639615 + 3.87857505922121 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 19336 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_113_1052_-0.269178690289186_9.90570037588112_3.87835140452003 chr14 73397337 73400632 + 3.87835140452003 NA Intergenic Intergenic -13713 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak1_55_483_-0.405686176070313_8.71602014923944_3.87814328462014 chr9 50732235 50733095 + 3.87814328462014 NA intron (NM_001311069, intron 1 of 19) intron (NM_001311069, intron 1 of 19) -4681 NM_178118 330938 Mm.82598 NM_178118 ENSMUSG00000032064 Dixdc1 4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735 DIX domain containing 1 protein-coding common_peak1_112_1041_-0.269620064106107_9.89032953022545_3.87731773560911 chr9 64793829 64795202 + 3.87731773560911 NA Intergenic Intergenic -16496 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak1_43_375_-0.46817879779733_8.32049945277897_3.87683489280716 chr17 47597054 47597739 + 3.87683489280716 NA intron (NM_007632, intron 2 of 4) intron (NM_007632, intron 2 of 4) 3929 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_95_869_-0.297871500271283_9.61593584060045_3.87648495633017 chr18 79071126 79072189 + 3.87648495633017 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 37734 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak2_95_869_-0.297871500271283_9.61593584060045_3.87648495633017 chr4 129618386 129619986 + 3.87648495633017 NA promoter-TSS (NM_198026) promoter-TSS (NM_198026) -93 NM_198026 230767 Mm.441132 NM_198026 ENSMUSG00000040795 Iqcc BC026978 IQ motif containing C protein-coding common_peak1_313_3352_-0.147148822201776_11.6376623566929_3.87549033815433 chr10 127287805 127290666 + 3.87549033815433 NA promoter-TSS (NM_033072) promoter-TSS (NM_033072) -464 NM_033072 110962 Mm.372826 NM_033072 ENSMUSG00000025409 Mbd6 D10Wsu93e methyl-CpG binding domain protein 6 protein-coding common_peak1_25_220_-0.6324813147505_7.47166190201618_3.87485667196953 chr14 27350325 27350867 + 3.87485667196953 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) -10793 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_25_220_-0.6324813147505_7.47166190201618_3.87485667196953 chr11 55197192 55198454 + 3.87485667196953 NA promoter-TSS (NR_046034) promoter-TSS (NR_046034) -141 NR_046034 74045 Mm.292156 NR_046034 ENSMUSG00000084980 Slc36a1os 4921508A21Rik solute carrier family 36 (proton/amino acid symporter), member 1, opposite strand ncRNA common_peak2_36_143_0.609858649769098_7.47485432632686_3.87485667196953 chr6 120911464 120912532 + 3.87485667196953 NA intron (NM_007544, intron 1 of 5) intron (NM_007544, intron 1 of 5) 4822 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding common_peak2_69_614_-0.356384574516712_9.08625031296825_3.87406880784976-2 chrX 7670158 7672069 + 3.87406880784976 NA intron (NM_019755, intron 1 of 4) intron (NM_019755, intron 1 of 4) 277 NM_019755 18824 Mm.18565 NM_019755 ENSMUSG00000031146 Plp2 mIMA4 proteolipid protein 2 protein-coding common_peak2_69_614_-0.356384574516712_9.08625031296825_3.87406880784976 chr5 124438892 124440871 + 3.87406880784976 NA promoter-TSS (NM_030241) promoter-TSS (NM_030241) -49 NM_030241 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding unique_peak2_7_76_-1.19714558875609_5.66821374631686_3.87325034407395 chr5 107359459 107360030 + 3.87325034407395 NA intron (NM_054054, intron 12 of 18) intron (NM_054054, intron 12 of 18) 28550 NM_054054 114642 Mm.182836 NM_054054 ENSMUSG00000029279 Brdt 7420412D09Rik|Brd6|Fsrg3 bromodomain, testis-specific protein-coding unique_peak2_7_76_-1.19714558875609_5.66821374631686_3.87325034407395-2 chr7 60156193 60156833 + 3.87325034407395 NA Intergenic Intergenic -16294 NM_001082962 20646 Mm.274995 NM_013670 ENSMUSG00000102252 Snrpn 2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN small nuclear ribonucleoprotein N protein-coding common_peak1_22_195_-0.676249040021698_7.27658532410436_3.87182238449735 chr4 88802601 88803124 + 3.87182238449735 NA promoter-TSS (NM_001161610).2 promoter-TSS (NM_001161610).2 -392 NM_001161609 545654 Mm.478784 NM_001161609 ENSMUSG00000095101 Gm13285 OTTMUSG00000011282|limitin predicted gene 13285 protein-coding unique_peak2_22_195_-0.676249040021698_7.27658532410436_3.87182238449735 chrX 136986047 136987283 + 3.87182238449735 NA intron (NM_001082412, intron 6 of 6) intron (NM_001082412, intron 6 of 6) 6367 NM_001114179 67062 Mm.276518 NM_001082412 ENSMUSG00000044348 Slc25a53 2310046F18Rik|2810402A17Rik|AI448995|AI841128|Mcart6 solute carrier family 25, member 53 protein-coding common_peak1_14_32_1.13765000205289_5.6132191203849_3.87167123306877 chr5 124541851 124542281 + 3.87167123306877 NA intron (NM_019770, intron 1 of 3) intron (NM_019770, intron 1 of 3) 1275 NM_019770 56334 Mm.325307 NM_019770 ENSMUSG00000029390 Tmed2 1110032D12Rik|1810020N21Rik|Rnp24|Sid394|p24beta1 transmembrane p24 trafficking protein 2 protein-coding unique_peak1_14_32_1.13765000205289_5.6132191203849_3.87167123306877 chr13 5804433 5804835 + 3.87167123306877 NA Intergenic Intergenic 53458 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak1_14_32_1.13765000205289_5.6132191203849_3.87167123306877-2 chr14 66265708 66266079 + 3.87167123306877 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) 15159 NM_172498 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_251_2596_-0.167796516353915_11.2587320405014_3.87153017236932 chr2 162930614 162932604 + 3.87153017236932 NA 5' UTR (NM_026499, exon 1 of 6) 5' UTR (NM_026499, exon 1 of 6) 101 NM_026499 67996 Mm.24042 NM_026499 ENSMUSG00000016921 Srsf6 1210001E11Rik|AI314910|AW146126|Sfrs6 serine/arginine-rich splicing factor 6 protein-coding common_peak2_126_825_0.272212722754599_9.82610433279675_3.87140289156422 chr6 122818941 122820886 + 3.87140289156422 NA promoter-TSS (NM_021899) promoter-TSS (NM_021899) -271 NM_021899 60611 Mm.87142 NM_021899 ENSMUSG00000003154 Foxj2 Fhx forkhead box J2 protein-coding common_peak1_27_236_-0.602178498880334_7.58765399945809_3.87132006816673-2 chrX 100625423 100625963 + 3.87132006816673 NA promoter-TSS (NM_008446) promoter-TSS (NM_008446) 214 NM_028303 72621 Mm.291607 NM_028303 ENSMUSG00000015668 Pdzd11 1810012H22Rik|2310079D11Rik|2700099C19Rik|AI854765|Pdzk11 PDZ domain containing 11 protein-coding common_peak1_27_236_-0.602178498880334_7.58765399945809_3.87132006816673 chr11 75347813 75348331 + 3.87132006816673 NA promoter-TSS (NM_001102611) promoter-TSS (NM_001102611) 311 NM_001164223 68275 Mm.102574 NM_026653 ENSMUSG00000000751 Rpa1 5031405K23Rik|70kDa|AA589576|AW557552|RF-A|RP-A|Rpa replication protein A1 protein-coding unique_peak2_27_236_-0.602178498880334_7.58765399945809_3.87132006816673 chr2 179965941 179967714 + 3.87132006816673 NA intron (NM_001081092, intron 1 of 14) intron (NM_001081092, intron 1 of 14) 9819 NM_001081092 228980 Mm.235542 NM_001081092 ENSMUSG00000039117 Taf4 135kDa|AI450312|TAFII130|TAFII135|Taf2c1|Taf4a TATA-box binding protein associated factor 4 protein-coding common_peak2_53_250_0.477276324075179_8.21018171598836_3.8704069639544 chr12 59215951 59217820 + 3.8704069639544 NA intron (NM_001033156, intron 1 of 3) intron (NM_001033156, intron 1 of 3) 2598 NM_001033156 70611 Mm.311026 NM_001033156 ENSMUSG00000035329 Fbxo33 5730501N20Rik|AI642135 F-box protein 33 protein-coding common_peak1_129_1219_-0.249138600930996_10.1280961319848_3.86946015564145 chr7 83882912 83884709 + 3.86946015564145 NA 5' UTR (NM_030705, exon 1 of 1) 5' UTR (NM_030705, exon 1 of 1) 531 NM_030705 80889 Mm.272998 NM_030705 ENSMUSG00000070462 Mesdc1 AW061151 mesoderm development candidate 1 protein-coding common_peak2_34_131_0.63705159516508_7.36291991694099_3.86919258310882 chr14 60784460 60785180 + 3.86919258310882 NA exon (NM_027436, exon 1 of 19) exon (NM_027436, exon 1 of 19) 254 NR_040642 70478 Mm.274650 NM_027436 ENSMUSG00000021993 Mipep 5730405E07Rik|MIP mitochondrial intermediate peptidase protein-coding common_peak2_34_131_0.63705159516508_7.36291991694099_3.86919258310882-4 chr5 139344283 139345282 + 3.86919258310882 NA intron (NM_197980, intron 1 of 2) intron (NM_197980, intron 1 of 2) 384 NM_197980 68033 Mm.261064 NM_197980 ENSMUSG00000045438 Cox19 1810074D02Rik|2810437L13Rik cytochrome c oxidase assembly protein 19 protein-coding common_peak2_34_131_0.63705159516508_7.36291991694099_3.86919258310882-3 chr2 173060666 173061548 + 3.86919258310882 NA Intergenic Intergenic 39205 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak2_34_131_0.63705159516508_7.36291991694099_3.86919258310882-2 chr18 12832425 12833555 + 3.86919258310882 NA intron (NM_001252491, intron 1 of 12) intron (NM_001252491, intron 1 of 12) -13083 NR_045524 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak2_120_1124_-0.259142441468951_10.0061380653699_3.8676509962979 chr10 80560790 80562381 + 3.8676509962979 NA promoter-TSS (NM_025852) promoter-TSS (NM_025852) -25 NM_025852 66932 Mm.1116 NM_025852 ENSMUSG00000047417 Rexo1 1700021P10Rik|2610511M11Rik|AW050347|EloA-BP1|Rex1|Tceb3bp1 REX1, RNA exonuclease 1 protein-coding common_peak2_56_492_-0.400945116827739_8.74497127796404_3.86726811412552 chr7 64373257 64374429 + 3.86726811412552 NA intron (NM_177893, intron 1 of 13) CpG 252 NM_177893 330554 Mm.236510 NM_177893 ENSMUSG00000033458 Fan1 6030441H18Rik|Mtmr15|mFAN1 FANCD2/FANCI-associated nuclease 1 protein-coding common_peak2_163_1585_-0.216509168265841_10.5229224715711_3.86702668585202 chr7 19664280 19666532 + 3.86702668585202 NA promoter-TSS (NM_019649) promoter-TSS (NM_019649) -376 NM_019649 56457 Mm.290960 NM_019649 ENSMUSG00000002981 Clptm1 HS9|N14 cleft lip and palate associated transmembrane protein 1 protein-coding unique_peak2_10_99_-1.01067075826713_6.13852081064116_3.86612983812674 chr4 152120864 152121624 + 3.86612983812674 NA exon (NM_207691, exon 10 of 10) exon (NM_207691, exon 10 of 10) 4901 NM_033042 85030 Mm.101198 NM_033042 ENSMUSG00000024793 Tnfrsf25 APO-3|DDR3|DR3|LARD|TR3|TRAMP|Tnfrsf12|WSL-1|WSL-LR|Wsl tumor necrosis factor receptor superfamily, member 25 protein-coding unique_peak2_10_99_-1.01067075826713_6.13852081064116_3.86612983812674-2 chr5 129941066 129941692 + 3.86612983812674 NA promoter-TSS (NM_027121) promoter-TSS (NM_027121) -730 NM_027121 69568 Mm.288718 NM_027121 ENSMUSG00000066735 Vkorc1l1 2310024K08Rik vitamin K epoxide reductase complex, subunit 1-like 1 protein-coding common_peak2_103_629_0.309437848626365_9.45392694270046_3.86608848103743 chr16 21332487 21333997 + 3.86608848103743 NA non-coding (NR_131983, exon 1 of 1) non-coding (NR_131983, exon 1 of 1) 114 NR_131983 76222 Mm.86031 NR_131983 Magef1 6430590I03Rik melanoma antigen family F, 1 pseudo common_peak1_183_1353_0.215285714077583_10.5106548806138_3.86491069388681 chr4 11006669 11008472 + 3.86491069388681 NA promoter-TSS (NM_175175) promoter-TSS (NM_175175) 49 NM_175175 71801 Mm.34351 NM_175175 ENSMUSG00000049969 Plekhf2 1110070J07Rik|AA673237|ZFYVE18 pleckstrin homology domain containing, family F (with FYVE domain) member 2 protein-coding common_peak1_230_1825_0.186385006942128_10.9276635534553_3.86473178133756 chr6 28260716 28262698 + 3.86473178133756 NA promoter-TSS (NM_001081678) promoter-TSS (NM_001081678) -106 NM_001081678 627049 Mm.84441 NM_001081678 ENSMUSG00000039841 Zfp800 AA407452|Znf800 zinc finger protein 800 protein-coding common_peak1_42_179_0.553874073924276_7.76879013329181_3.86459659702415 chr16 13796279 13797392 + 3.86459659702415 NA intron (NM_001039521, intron 10 of 17) intron (NM_001039521, intron 10 of 17) 16136 NM_001039521 106298 Mm.288606 NM_001039521 ENSMUSG00000022682 Rrn3 AL023001|E130302O19Rik|R75565|TIF-1A|Tif1a RRN3 RNA polymerase I transcription factor homolog (yeast) protein-coding common_peak1_228_2324_-0.177547106124583_11.0942414478205_3.86407334183483 chr11 79639973 79642761 + 3.86407334183483 NA intron (NM_175543, intron 3 of 14) MIRc|SINE|MIR -18204 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202|OTTMUSG00000000185 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA common_peak2_278_2334_0.165744402443849_11.2720790358189_3.86402828756668 chr11 78175837 78179381 + 3.86402828756668 NA promoter-TSS (NM_001291235) promoter-TSS (NM_001291235) -540 NM_001291235 68385 Mm.390375 NM_026708 ENSMUSG00000019437 Tlcd1 - TLC domain containing 1 protein-coding common_peak1_44_383_-0.458783863156524_8.35557056914289_3.86360125945437-2 chr7 141302871 141303760 + 3.86360125945437 NA intron (NM_016874, intron 10 of 11) intron (NM_016874, intron 10 of 11) 11309 NM_007878 13491 Mm.41075 NM_007878 ENSMUSG00000025496 Drd4 AW125663|D4R|Drd-4 dopamine receptor D4 protein-coding common_peak1_44_383_-0.458783863156524_8.35557056914289_3.86360125945437 chr1 153616634 153617652 + 3.86360125945437 NA Intergenic MTEa|LTR|ERVL-MaLR -35894 NM_026380 67792 Mm.379143 NM_026380 ENSMUSG00000042671 Rgs8 6530413N01Rik regulator of G-protein signaling 8 protein-coding common_peak2_44_383_-0.458783863156524_8.35557056914289_3.86360125945437 chr8 71396163 71397529 + 3.86360125945437 NA promoter-TSS (NM_026636) promoter-TSS (NM_026636) -9 NM_026636 68251 Mm.21749 NM_026636 ENSMUSG00000031820 Babam1 5430437P03Rik|Merit40 BRISC and BRCA1 A complex member 1 protein-coding common_peak2_102_621_0.310777113646136_9.43615932695367_3.8623483458529 chr6 65042109 65043621 + 3.8623483458529 NA promoter-TSS (NM_001253392) promoter-TSS (NM_001253392) 198 NM_007958 13990 Mm.99113 NM_007958 ENSMUSG00000029920 Smarcad1 AV081750|AW226546|D6Pas1|Etl1|mKIAA1122 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding common_peak2_102_621_0.310777113646136_9.43615932695367_3.8623483458529-2 chr7 64042315 64044423 + 3.8623483458529 NA Intergenic Intergenic -104454 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak1_58_285_0.445655068263436_8.38269887091011_3.86221225066956 chr16 33683828 33685087 + 3.86221225066956 NA promoter-TSS (NM_175256) promoter-TSS (NM_175256) -9 NM_175256 77446 Mm.245741 NM_172934 ENSMUSG00000075254 Heg1 4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629|OTTMUSG00000027315 heart development protein with EGF-like domains 1 protein-coding common_peak1_127_1197_-0.25032199610455_10.1012511947365_3.86217056688222 chr11 118248818 118249935 + 3.86217056688222 NA promoter-TSS (NM_001112699) promoter-TSS (NM_001112699) -784 NM_011180 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak2_134_1271_-0.242569801566439_10.1915980545011_3.86098739727375 chr15 39111762 39113540 + 3.86098739727375 NA promoter-TSS (NM_172402) promoter-TSS (NM_172402) 65 NM_172402 69906 Mm.17875 NM_172402 ENSMUSG00000022299 Slc25a32 2610043O12Rik|Mftc solute carrier family 25, member 32 protein-coding common_peak1_29_253_-0.580028254174462_7.69867055968493_3.86055125367365 chr11 59201891 59202446 + 3.86055125367365 NA promoter-TSS (NM_001302335) promoter-TSS (NM_001302335) 263 NR_037964 72203 Mm.339566 NR_037964 2610507I01Rik 5033414D05Rik RIKEN cDNA 2610507I01 gene ncRNA common_peak2_379_3480_0.136408313924239_11.8334902556858_3.86053248433123 chr18 65429373 65432932 + 3.86053248433123 NA 5' UTR (NM_172833, exon 1 of 16) 5' UTR (NM_172833, exon 1 of 16) 155 NM_172833 240354 Mm.132613 NM_172833 ENSMUSG00000032688 Malt1 A630046N12|D430033E09Rik|Pcasp1 MALT1 paracaspase protein-coding common_peak1_23_72_0.823950909212077_6.60180001348606_3.85966395426045-3 chr6 119195860 119196501 + 3.85966395426045 NA exon (NM_009781, exon 1 of 47) exon (NM_009781, exon 1 of 47) 229 NM_001255997 12288 Mm.41628 NM_009781 ENSMUSG00000051331 Cacna1c Cav1.2|Cchl1a1|D930026N18Rik|MBC|MELC-CC calcium channel, voltage-dependent, L type, alpha 1C subunit protein-coding unique_peak1_23_72_0.823950909212077_6.60180001348606_3.85966395426045 chr16 91780845 91781421 + 3.85966395426045 NA intron (NM_010587, intron 1 of 38) ORR1D2|LTR|ERVL-MaLR 51762 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding common_peak1_23_72_0.823950909212077_6.60180001348606_3.85966395426045-2 chr5 16469652 16470122 + 3.85966395426045 NA Intergenic Intergenic -83608 NM_001289460 15234 Mm.267078 NM_010427 ENSMUSG00000028864 Hgf C230052L06Rik|HGF/SF|NK1|NK2|SF|SF/HGF hepatocyte growth factor protein-coding unique_peak2_23_72_0.823950909212077_6.60180001348606_3.85966395426045 chr15 58164881 58165485 + 3.85966395426045 NA Intergenic Intergenic 23747 NM_029734 76773 Mm.26771 NM_029734 ENSMUSG00000022359 Wdyhv1 2410187C16Rik|AU014961|AW550036|Ntaq1 WDYHV motif containing 1 protein-coding common_peak1_23_72_0.823950909212077_6.60180001348606_3.85966395426045 chr10 62946993 62947488 + 3.85966395426045 NA TTS (NM_175194) TTS (NM_175194) 211 NM_177372 327762 Mm.21492 NM_177372 ENSMUSG00000036875 Dna2 Dna2l|E130315B21Rik DNA replication helicase/nuclease 2 protein-coding common_peak1_78_430_0.370555032024217_8.93682157510121_3.85938564207079 chr1 161749788 161751456 + 3.85938564207079 NA Intergenic Intergenic 37873 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_49_224_0.498846312105703_8.06320434726989_3.85905460363811 chr17 24736413 24737111 + 3.85905460363811 NA TTS (NM_001163945) TTS (NM_001163945) 120 NM_013759 27361 Mm.28212 NM_013759 ENSMUSG00000075705 Msrb1 D17Wsu82e|SELX|SelR|Sepr|Sepx1 methionine sulfoxide reductase B1 protein-coding common_peak2_239_1919_0.181602770548254_10.9976919808826_3.85879709656949 chr4 131872560 131874944 + 3.85879709656949 NA 5' UTR (NM_020587, exon 1 of 6) 5' UTR (NM_020587, exon 1 of 6) 113 NM_020587 57317 Mm.2478 NM_020587 ENSMUSG00000028911 Srsf4 5730499P16Rik|AW550192|MNCb-2616|SRp75|Sfrs4 serine/arginine-rich splicing factor 4 protein-coding common_peak2_209_1611_0.197556513335208_10.7534142851956_3.85877751870111 chr4 150000382 150002937 + 3.85877751870111 NA intron (NM_173371, intron 1 of 4) MIRc|SINE|MIR 1577 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak1_17_154_-0.77143904340157_6.89040488357345_3.85864597406371-2 chr4 132749352 132749819 + 3.85864597406371 NA intron (NM_133888, intron 1 of 7) T-rich|Low_complexity|Low_complexity 7586 NM_133888 100340 Mm.287187 NM_133888 ENSMUSG00000028885 Smpdl3b 1110054A24Rik|AU045240|Asml3b sphingomyelin phosphodiesterase, acid-like 3B protein-coding common_peak1_17_154_-0.77143904340157_6.89040488357345_3.85864597406371 chr17 78351755 78352092 + 3.85864597406371 NA intron (NM_015800, intron 12 of 16) intron (NM_015800, intron 12 of 16) 66229 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_178_1305_0.218605403876337_10.4602418834846_3.85761181826035 chr6 108667460 108669216 + 3.85761181826035 NA Intergenic Intergenic -7404 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_72_643_-0.348597851728989_9.15661795225012_3.85659916195192 chr6 50426371 50428786 + 3.85659916195192 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 28592 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_21_186_-0.687096717193685_7.20334610129079_3.85652628798182 chr3 88058098 88058603 + 3.85652628798182 NA exon (NM_144897, exon 1 of 6) exon (NM_144897, exon 1 of 6) 145 NM_144897 246703 Mm.205996 NM_144897 ENSMUSG00000028070 Apoa1bp AA087124|AI-BP|AIBP|Apoa1ip|ESTM37|Naxe apolipoprotein A-I binding protein protein-coding unique_peak2_21_186_-0.687096717193685_7.20334610129079_3.85652628798182 chr13 98896167 98897599 + 3.85652628798182 NA intron (NM_178716, intron 1 of 23) intron (NM_178716, intron 1 of 23) -5841 NM_001048267 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak1_21_186_-0.687096717193685_7.20334610129079_3.85652628798182-2 chr9 108566413 108566963 + 3.85652628798182 NA exon (NM_023247, exon 2 of 5) exon (NM_023247, exon 2 of 5) 654 NM_023247 66706 Mm.29471 NM_023247 ENSMUSG00000070283 Ndufaf3 4733401H18Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3 protein-coding common_peak1_260_2141_0.17218958206888_11.1508375557847_3.85612760777271 chr11 17158613 17160591 + 3.85612760777271 NA intron (NM_024459, intron 1 of 5) CpG 304 NM_024459 19058 Mm.41840 NM_024459 ENSMUSG00000033953 Ppp3r1 CaNB1|Cnb1|MCIP1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein-coding common_peak1_190_1422_0.209651559460312_10.5795457262566_3.85555439731274 chr16 22856939 22858576 + 3.85555439731274 NA promoter-TSS (NM_026400) promoter-TSS (NM_026400) -88 NM_001316746 70573 Mm.68291 NM_001081368 ENSMUSG00000004462 Tbccd1 5730478M09Rik|AU015083|BB165076 TBCC domain containing 1 protein-coding common_peak1_20_58_0.894831594436656_6.33005884658017_3.85412893132298 chr11 33919641 33920040 + 3.85412893132298 NA intron (NM_001190886, intron 1 of 7) MIRb|SINE|MIR -43173 NM_031169 16533 Mm.6206 NM_031169 ENSMUSG00000020155 Kcnmb1 BKbeta1 potassium large conductance calcium-activated channel, subfamily M, beta member 1 protein-coding common_peak1_20_58_0.894831594436656_6.33005884658017_3.85412893132298-4 chrX 85872365 85872845 + 3.85412893132298 NA intron (NM_001163539, intron 1 of 1) intron (NM_001163539, intron 1 of 1) 2332 NM_001163539 71398 Mm.185296 NM_001163539 ENSMUSG00000025058 5430427O19Rik - RIKEN cDNA 5430427O19 gene protein-coding common_peak1_20_58_0.894831594436656_6.33005884658017_3.85412893132298-3 chr5 113650320 113650789 + 3.85412893132298 NA promoter-TSS (NM_008153) promoter-TSS (NM_008153) -164 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak1_20_58_0.894831594436656_6.33005884658017_3.85412893132298-2 chr13 113084830 113085335 + 3.85412893132298 NA intron (NM_001281487, intron 11 of 11) intron (NM_001281487, intron 11 of 11) 15899 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak1_54_257_0.470063762962662_8.24625913690458_3.85343330086708 chr2 174110312 174111145 + 3.85343330086708 NA intron (NM_213733, intron 1 of 11) CpG 377 NM_213733 228961 Mm.295629 NM_213733 ENSMUSG00000039263 Npepl1 BC023239|C85514|mKIAA1974 aminopeptidase-like 1 protein-coding common_peak2_28_98_0.719306694432959_6.98900996729609_3.85342138438135 chr2 177205880 177206550 + 3.85342138438135 NA Intergenic RMER17B|LTR|ERVK -258527 NM_001177568 628308 Mm.460436 NM_001177568 ENSMUSG00000078866 Zfp970 Gm14420|OTTMUSG00000016588 zinc finger protein 970 protein-coding common_peak2_28_98_0.719306694432959_6.98900996729609_3.85342138438135-2 chr8 71205269 71206028 + 3.85342138438135 NA intron (NR_131056, intron 1 of 4) MuRRS-int|LTR|ERV1 1300 NR_131056 330796 Mm.258257 NR_131056 Gm38415 E230016D10 predicted gene, 38415 ncRNA common_peak2_195_1943_-0.194711644322384_10.8274566814446_3.85340967445012 chr19 42088818 42091470 + 3.85340967445012 NA promoter-TSS (NM_145501) promoter-TSS (NM_145501) -291 NM_145501 84095 Mm.117037 NM_145501 ENSMUSG00000025178 Pi4k2a Pi4k2 phosphatidylinositol 4-kinase type 2 alpha protein-coding common_peak2_32_120_0.658456710386285_7.24809159246774_3.85200032984663 chr4 129913652 129914530 + 3.85200032984663 NA Intergenic Intergenic 7865 NR_045190 319894 Mm.59196 NR_045190 ENSMUSG00000086369 E330017L17Rik - RIKEN cDNA E330017L17 gene ncRNA common_peak2_145_1389_-0.231937830038884_10.3249002525914_3.85147387550423 chr8 84186273 84188394 + 3.85147387550423 NA Intergenic L2|LINE|L2 -8372 NR_029821 723819 NR_029821 ENSMUSG00000065483 Mir181c Mirn181c|mir-181c microRNA 181c ncRNA common_peak1_59_292_0.440511889361812_8.41501279910315_3.85110970337079 chr10 42192332 42193245 + 3.85110970337079 NA intron (NM_019740, intron 3 of 3) intron (NM_019740, intron 3 of 3) 83954 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding common_peak2_223_2265_-0.179530462243521_11.0561669146988_3.85095238960894 chr9 94536365 94539353 + 3.85095238960894 NA exon (NM_001033145, exon 1 of 3) exon (NM_001033145, exon 1 of 3) 222 NM_001033145 68861 Mm.258746 NM_001033145 ENSMUSG00000045414 1190002N15Rik GoPro49|HASF RIKEN cDNA 1190002N15 gene protein-coding common_peak1_24_211_-0.641905262426815_7.40696782334979_3.84900034479498 chr9 120039520 120039973 + 3.84900034479498 NA Intergenic Intergenic -16148 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak2_64_567_-0.372832599171785_8.96333081991879_3.84715580797028 chr1 90602801 90604190 + 3.84715580797028 NA promoter-TSS (NM_133805) promoter-TSS (NM_133805) 70 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding common_peak1_392_4356_-0.127897619915011_12.0251705879577_3.84611362715937 chr7 102248707 102251692 + 3.84611362715937 NA promoter-TSS (NM_019566) promoter-TSS (NM_019566) -81 NM_019566 56212 Mm.259795 NM_019566 ENSMUSG00000073982 Rhog 2810426G09Rik|Arhg|Sid10750 ras homolog family member G protein-coding common_peak1_30_109_0.685322491209647_7.12402095912948_3.8456797022241-2 chr7 109703712 109704336 + 3.8456797022241 NA exon (NM_020616, exon 2 of 6) exon (NM_020616, exon 2 of 6) 287 NM_020616 57373 Mm.334138 NM_020616 ENSMUSG00000031023 Akip1 BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27 A kinase (PRKA) interacting protein 1 protein-coding common_peak1_30_109_0.685322491209647_7.12402095912948_3.8456797022241 chr15 83434214 83434843 + 3.8456797022241 NA intron (NM_001159509, intron 1 of 10) URR1B|DNA|hAT-Charlie -1678 NM_001159510 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_53_464_-0.412267027969444_8.65495339201067_3.84521988872175 chr1 184048558 184049481 + 3.84521988872175 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 14558 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak2_67_349_0.405549771514554_8.65398599758961_3.84521988872175 chr6 112888863 112891266 + 3.84521988872175 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 57202 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak1_114_1061_-0.266001659832323_9.91956722088799_3.84513455730178 chr12 54709764 54710592 + 3.84513455730178 NA Intergenic Intergenic -14313 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak1_76_681_-0.336906388251107_9.24517473489862_3.84464254169353 chr11 118462121 118463250 + 3.84464254169353 NA Intergenic Intergenic -7690 NR_045902 100126224 Mm.441989 NR_045902 ENSMUSG00000086514 Gm11747 OTTMUSG00000003972 predicted gene 11747 ncRNA common_peak1_76_681_-0.336906388251107_9.24517473489862_3.84464254169353-2 chr15 86062179 86063215 + 3.84464254169353 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 3970 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding unique_peak1_19_53_0.936246725467308_6.22301086489712_3.84312720942358-2 chr19 59312189 59312727 + 3.84312720942358 NA intron (NM_001033222, intron 3 of 4) intron (NM_001033222, intron 3 of 4) 33322 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding common_peak1_19_53_0.936246725467308_6.22301086489712_3.84312720942358-3 chr6 147043059 147043508 + 3.84312720942358 NA intron (NM_145573, intron 1 of 7) intron (NM_145573, intron 1 of 7) 513 NM_145573 232536 Mm.46656 NM_145573 ENSMUSG00000040112 Mrps35 MDSO23|MRP-S28|MRPS28 mitochondrial ribosomal protein S35 protein-coding unique_peak1_19_53_0.936246725467308_6.22301086489712_3.84312720942358 chr10 40353900 40354410 + 3.84312720942358 NA intron (NM_001291816, intron 1 of 11) intron (NM_001291816, intron 1 of 11) 4847 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak1_19_53_0.936246725467308_6.22301086489712_3.84312720942358 chr10 61256009 61256538 + 3.84312720942358 NA intron (NM_001081127, intron 2 of 21) intron (NM_001081127, intron 2 of 21) 17165 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding unique_peak1_19_53_0.936246725467308_6.22301086489712_3.84312720942358-3 chr2 165951622 165952051 + 3.84312720942358 NA Intergenic ID_B1|SINE|B4 -40801 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak1_19_53_0.936246725467308_6.22301086489712_3.84312720942358-2 chr2 167947676 167948122 + 3.84312720942358 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 15572 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_123_1155_-0.25501885539366_10.0474162548038_3.84248817404774 chr3 88335244 88338029 + 3.84248817404774 NA intron (NM_178246, intron 1 of 21) intron (NM_178246, intron 1 of 21) 376 NM_178246 229512 Mm.439830 NM_173188 ENSMUSG00000001415 Smg5 BC024683|mKIAA1089 Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding unique_peak2_12_114_-0.916681117489798_6.38714949219948_3.84189370477376 chr19 5463975 5464834 + 3.84189370477376 NA TTS (NM_009985) TTS (NM_009985) 3797 NM_021438 58249 Mm.329656 NM_021438 ENSMUSG00000024911 Fibp 2010004G08Rik|2010005N21Rik|3010027N18Rik fibroblast growth factor (acidic) intracellular binding protein protein-coding common_peak1_12_114_-0.916681117489798_6.38714949219948_3.84189370477376 chrX 107256962 107257337 + 3.84189370477376 NA intron (NM_001177781, intron 2 of 4) intron (NM_001177781, intron 2 of 4) 1121 NM_001033251 213439 Mm.383562 NM_001033251 ENSMUSG00000073008 Gpr174 Gm376|Lypsr3 G protein-coupled receptor 174 protein-coding common_peak1_68_356_0.402815056217696_8.68118779213795_3.84157018119267 chr11 53820028 53821285 + 3.84157018119267 NA intron (NR_033332, intron 2 of 3) intron (NR_033332, intron 2 of 3) 38600 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA common_peak1_268_2799_-0.160851990263321_11.3707851167007_3.84155829920226 chr8 34215035 34217558 + 3.84155829920226 NA Intergenic Intergenic -49584 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak1_130_1228_-0.246181938525789_10.1401782311098_3.84102064283321 chr7 24883905 24885266 + 3.84102064283321 NA promoter-TSS (NM_023133) promoter-TSS (NM_023133) -129 NM_023133 20085 Mm.300281 NM_023133 ENSMUSG00000040952 Rps19 Dsk3 ribosomal protein S19 protein-coding unique_peak2_16_146_-0.796136083862192_6.80160430290527_3.84071726920102 chr3 60509474 60510798 + 3.84071726920102 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 8957 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_16_146_-0.796136083862192_6.80160430290527_3.84071726920102 chr6 135363714 135364165 + 3.84071726920102 NA intron (NM_001288628, intron 1 of 5) intron (NM_001288628, intron 1 of 5) 1008 NM_001288628 13730 Mm.182785 NM_010128 ENSMUSG00000030208 Emp1 I-8-09|TMP epithelial membrane protein 1 protein-coding common_peak1_154_1486_-0.223401140439792_10.4264883618325_3.84055360429026 chr18 38365216 38367988 + 3.84055360429026 NA Intergenic PB1D10|SINE|Alu -27609 NM_011937 26384 Mm.22374 NM_011937 ENSMUSG00000052102 Gnpda1 GNPDA|Gnp1|Gnpi|oscillin glucosamine-6-phosphate deaminase 1 protein-coding unique_peak2_26_227_-0.610682447325146_7.52754879050217_3.84030224878814 chr9 59352921 59353948 + 3.84030224878814 NA promoter-TSS (NM_175325) promoter-TSS (NM_175325) 74 NM_175325 102774 Mm.200714 NM_175325 ENSMUSG00000025235 Bbs4 AW537059|AW742241|D9Ertd464e Bardet-Biedl syndrome 4 (human) protein-coding common_peak1_37_149_0.598157824087366_7.52789760253956_3.84030224878814 chr4 115784905 115785569 + 3.84030224878814 NA exon (NM_181040, exon 1 of 9) exon (NM_181040, exon 1 of 9) 423 NM_181040 230649 Mm.109600 NM_181040 ENSMUSG00000028710 Atpaf1 6330547J17Rik|AI593252|ATP11|ATP11p ATP synthase mitochondrial F1 complex assembly factor 1 protein-coding common_peak2_58_511_-0.394473594958175_8.80276320252091_3.84029612594849 chr12 87442787 87444429 + 3.84029612594849 NA promoter-TSS (NM_026958) promoter-TSS (NM_026958) 231 NM_001102565 211064 Mm.486235 NM_001102565 ENSMUSG00000079036 Alkbh1 2700073G19Rik|Abh|Alkbh|alkB|hABH alkB homolog 1, histone H2A dioxygenase protein-coding common_peak2_69_363_0.400263385511193_8.70792633295429_3.838569760133 chr11 59505467 59506979 + 3.838569760133 NA non-coding (NR_015585, exon 1 of 5) non-coding (NR_015585, exon 1 of 5) 417 NM_001291014 268417 Mm.239793 NM_172941 ENSMUSG00000020472 Zkscan17 Nizp1|Zfp496|Znf496 zinc finger with KRAB and SCAN domains 17 protein-coding common_peak1_252_2056_0.175516138696429_11.0940841478731_3.83832520244372 chr17 57076904 57079391 + 3.83832520244372 NA intron (NM_153551, intron 1 of 23) intron (NM_153551, intron 1 of 23) 363 NM_153551 70785 Mm.284447 NM_153551 ENSMUSG00000002668 Dennd1c 4432409M07Rik DENN/MADD domain containing 1C protein-coding common_peak2_46_205_0.516630560242799_7.94481580730462_3.83806188963296 chr6 34383796 34384994 + 3.83806188963296 NA exon (NM_172398, exon 1 of 10) exon (NM_172398, exon 1 of 10) 148 NM_172398 67861 Mm.70371 NM_172398 ENSMUSG00000061758 Akr1b10 2310005E10Rik|Akr1b16 aldo-keto reductase family 1, member B10 (aldose reductase) protein-coding common_peak1_42_365_-0.469972668030092_8.280713504269_3.83797350348246 chr13 19358076 19358868 + 3.83797350348246 NA intron (NM_024270, intron 8 of 8) intron (NM_024270, intron 8 of 8) 37341 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak2_204_2045_-0.189041577801582_10.9040696408445_3.8378284974445 chr11 98026012 98028034 + 3.8378284974445 NA promoter-TSS (NM_009078) promoter-TSS (NM_009078) 99 NM_009078 19921 Mm.10247 NM_009078 ENSMUSG00000017404 Rpl19 - ribosomal protein L19 protein-coding common_peak1_79_710_-0.329346899615928_9.30903229981145_3.83737159056625 chr3 88336170 88337202 + 3.83737159056625 NA intron (NM_178246, intron 1 of 21) intron (NM_178246, intron 1 of 21) 426 NM_178246 229512 Mm.439830 NM_173188 ENSMUSG00000001415 Smg5 BC024683|mKIAA1089 Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_79_710_-0.329346899615928_9.30903229981145_3.83737159056625 chr10 128673278 128674762 + 3.83737159056625 NA promoter-TSS (NM_173733) promoter-TSS (NM_173733) -102 NM_173733 211389 Mm.23352 NM_173733 ENSMUSG00000049858 Suox SO sulfite oxidase protein-coding common_peak1_81_729_-0.323697077515597_9.34990411500958_3.83632830310646 chr8 70342301 70343358 + 3.83632830310646 NA intron (NM_001122829, intron 3 of 23) intron (NM_001122829, intron 3 of 23) 10444 NM_030680 19704 Mm.258280 NM_030680 ENSMUSG00000058301 Upf1 B430202H16Rik|NORF1|PNORF-1|Rent1|Upflp UPF1 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak1_341_3701_-0.138843632980761_11.7846673633802_3.83555756118303 chr6 149308021 149310721 + 3.83555756118303 NA promoter-TSS (NM_026054) promoter-TSS (NM_026054) -43 NM_001289661 67246 Mm.333515 NM_026054 ENSMUSG00000032712 2810474O19Rik 6720435I21Rik|AA536804|AU020969|GET|Kiaa1551 RIKEN cDNA 2810474O19 gene protein-coding common_peak1_142_1356_-0.234014658836427_10.2891976760006_3.83492057689699 chr12 55490653 55491890 + 3.83492057689699 NA TTS (NR_035430) TTS (NR_035430) 1376 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak1_95_868_-0.296212276349593_9.6151062286396_3.83437912967607 chr12 16568733 16570196 + 3.83437912967607 NA intron (NM_172950, intron 5 of 19) intron (NM_172950, intron 5 of 19) 20306 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak2_39_339_-0.49164439732057_8.16356873747742_3.83414081576411-2 chr8 81701392 81703609 + 3.83414081576411 NA intron (NM_001297591, intron 2 of 24) intron (NM_001297591, intron 2 of 24) 359938 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding common_peak2_39_339_-0.49164439732057_8.16356873747742_3.83414081576411 chr15 88819488 88820355 + 3.83414081576411 NA promoter-TSS (NM_001142357) promoter-TSS (NM_001142357) 275 NM_029720 76737 Mm.292567 NM_029720 ENSMUSG00000023272 Creld2 5730592L21Rik|C85758 cysteine-rich with EGF-like domains 2 protein-coding common_peak2_39_339_-0.49164439732057_8.16356873747742_3.83414081576411-3 chr9 50323878 50325339 + 3.83414081576411 NA Intergenic Intergenic -91426 NR_131161 71873 NR_131161 ENSMUSG00000110916 2310003N18Rik - RIKEN cDNA 2310003N18 gene ncRNA common_peak1_39_339_-0.49164439732057_8.16356873747742_3.83414081576411 chr5 149015035 149015853 + 3.83414081576411 NA Intergenic Intergenic 8482 NR_040429 100503307 Mm.188008 NR_040429 ENSMUSG00000086610 Gm15408 OTTMUSG00000021225 predicted gene 15408 ncRNA common_peak2_196_1953_-0.193108135343085_10.8356606842968_3.83397949376977 chr5 124424048 124426775 + 3.83397949376977 NA intron (NM_001081203, intron 1 of 31) CpG 503 NM_001081203 243272 Mm.23879 NM_001081203 ENSMUSG00000038095 Sbno1 9330180L10Rik|AI849128|AW557836|BC021875|Sbno|mSno1|sno strawberry notch homolog 1 (Drosophila) protein-coding common_peak2_40_167_0.569125842286665_7.67688034392209_3.83397075963999 chr14 75015818 75016787 + 3.83397075963999 NA intron (NM_198642, intron 1 of 13) CpG 275 NM_198642 271221 Mm.320280 NM_198642 ENSMUSG00000034959 Rubcnl 5031414D18Rik|Gm744|Gm911|Kiaa0226l RUN and cysteine rich domain containing beclin 1 interacting protein like protein-coding common_peak2_408_3826_0.129841540641445_11.9669189559892_3.83384245363893 chr4 133658321 133662765 + 3.83384245363893 NA TTS (NM_001145956) TTS (NM_001145956) 12104 NM_001145955 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak1_121_1134_-0.257344819944949_10.0198041722058_3.83333256763437 chr11 98464853 98466237 + 3.83333256763437 NA 3' UTR (NM_011771, exon 8 of 8) 3' UTR (NM_011771, exon 8 of 8) 18711 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak2_85_768_-0.314500306521522_9.42958963470107_3.83306141278936 chr18 10531773 10533890 + 3.83306141278936 NA exon (NM_001083628, exon 19 of 33) exon (NM_001083628, exon 19 of 33) 77521 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding common_peak2_94_858_-0.298044530863251_9.59749205570684_3.8330022963395 chr13 113579330 113581471 + 3.8330022963395 NA Intergenic Intergenic 38164 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak1_655_6990_0.0966093901698439_12.8195878147259_3.83286784746603 chr10 61271762 61275928 + 3.83286784746603 NA promoter-TSS (NM_001081127) promoter-TSS (NM_001081127) -407 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak2_608_6361_0.101069283391809_12.6857992982354_3.83225551093629 chr13 114906698 114919051 + 3.83225551093629 NA intron (NM_008396, intron 1 of 29) intron (NM_008396, intron 1 of 29) 19167 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_61_306_0.431199670550484_8.47769468064542_3.83212717063264 chr12 104213829 104214899 + 3.83212717063264 NA promoter-TSS (NM_001168295) promoter-TSS (NM_001168295) -180 NM_001168294 238393 Mm.483584 NM_001033335 ENSMUSG00000066363 Serpina3f 2A1|BC049975 serine (or cysteine) peptidase inhibitor, clade A, member 3F protein-coding common_peak1_120_1123_-0.257859475585478_10.0054965824282_3.83065240717908 chr11 74925505 74926458 + 3.83065240717908 NA promoter-TSS (NM_013761) promoter-TSS (NM_013761) 109 NM_001002764 103677 Mm.288460 NM_001002764 ENSMUSG00000038290 Smg6 AI317223|AU041178 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_90_818_-0.305374598920961_9.52503234218053_3.83008363961714 chr17 83397260 83398470 + 3.83008363961714 NA intron (NM_199466, intron 1 of 20) intron (NM_199466, intron 1 of 20) 46934 NM_001114362 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding common_peak2_106_654_0.303619322930961_9.50716075789029_3.83005179320855 chr17 47687248 47689470 + 3.83005179320855 NA promoter-TSS (NM_001164729) promoter-TSS (NM_001164729) 27 NM_025365 66119 Mm.89912 NM_025365 ENSMUSG00000033475 Tomm6 1110002E23Rik|AI663970 translocase of outer mitochondrial membrane 6 homolog (yeast) protein-coding common_peak1_84_759_-0.318213760478455_9.41074872809172_3.82948082545992-2 chr11 3265726 3266558 + 3.82948082545992 NA intron (NM_007879, intron 1 of 8) CpG 244 NM_007879 13494 Mm.3250 NM_007879 ENSMUSG00000020457 Drg1 AA408859|AI132520|Nedd3 developmentally regulated GTP binding protein 1 protein-coding common_peak1_84_759_-0.318213760478455_9.41074872809172_3.82948082545992 chr1 164078432 164080080 + 3.82948082545992 NA intron (NM_011346, intron 8 of 8) B3A|SINE|B2 17180 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak2_109_1009_-0.272236248066886_9.84402145360571_3.82870310434823 chr11 70614279 70616813 + 3.82870310434823 NA promoter-TSS (NM_001145537) promoter-TSS (NM_001145537) -348 NM_001145537 668433 Mm.425687 NM_001145537 ENSMUSG00000087279 4930544D05Rik - RIKEN cDNA 4930544D05 gene protein-coding common_peak2_15_138_-0.82268780959834_6.70759716792434_3.82863094493248 chr6 134946826 134947585 + 3.82863094493248 NA intron (NR_037956, intron 1 of 1) ID_B1|SINE|B4 18113 NR_037955 381822 Mm.5935 NR_037955 ENSMUSG00000098318 Lockd 1190002F15Rik|AI120476|Droc lncRNA downstream of Cdkn1b ncRNA unique_peak2_15_138_-0.82268780959834_6.70759716792434_3.82863094493248-2 chr5 107756296 107757037 + 3.82863094493248 NA intron (NM_007964, intron 17 of 17) intron (NM_007964, intron 17 of 17) -30861 NM_001267621 14581 Mm.2078 NM_010278 ENSMUSG00000029275 Gfi1 AW495828|Gfi-1|Pal-1|Pal1 growth factor independent 1 protein-coding common_peak1_15_138_-0.82268780959834_6.70759716792434_3.82863094493248 chr19 10555856 10556299 + 3.82863094493248 NA promoter-TSS (NM_001277861) promoter-TSS (NM_001277861) 161 NM_026798 68642 Mm.31236 NM_026798 ENSMUSG00000024667 Tmem216 1110017C22Rik|2810441K11Rik|4921533J23Rik|A930021F15Rik|AI482550 transmembrane protein 216 protein-coding unique_peak2_15_138_-0.82268780959834_6.70759716792434_3.82863094493248 chr4 138943372 138944387 + 3.82863094493248 NA Intergenic ORR1E|LTR|ERVL-MaLR -23233 NM_025786 66825 Mm.252312 NM_025786 ENSMUSG00000070661 Rnf186 9130020G10Rik ring finger protein 186 protein-coding common_peak2_35_137_0.622773216280854_7.4199110649186_3.82834469096266 chr6 54759693 54760557 + 3.82834469096266 NA Intergenic Intergenic -56791 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak2_152_1464_-0.22487965602887_10.4042451212952_3.82779368265041 chr4 62516968 62520598 + 3.82779368265041 NA intron (NM_008525, intron 1 of 11) intron (NM_008525, intron 1 of 11) 1126 NM_001276446 17025 Mm.6988 NM_008525 ENSMUSG00000028393 Alad ALADH|Lv aminolevulinate, delta-, dehydratase protein-coding common_peak2_729_8004_0.0903512370466864_13.011861305927_3.82731348062313 chr2 22802781 22812747 + 3.82731348062313 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 33437 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak2_416_3923_0.128009970726646_12.0021143115826_3.82544557115424 chr11 76732755 76737627 + 3.82544557115424 NA intron (NM_016810, intron 7 of 8) intron (NM_016810, intron 7 of 8) 28364 NM_016810 53334 Mm.20931 NM_016810 ENSMUSG00000010392 Gosr1 AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28 golgi SNAP receptor complex member 1 protein-coding common_peak1_28_244_-0.587974624490003_7.64265062675757_3.82501082073516-2 chr6 125425569 125426267 + 3.82501082073516 NA Intergenic B1_Mur3|SINE|Alu -45414 NM_198604 213522 Mm.333396 NM_198604 ENSMUSG00000038167 Plekhg6 BC026778|Gm155 pleckstrin homology domain containing, family G (with RhoGef domain) member 6 protein-coding common_peak2_28_244_-0.587974624490003_7.64265062675757_3.82501082073516 chr4 88802249 88803326 + 3.82501082073516 NA promoter-TSS (NM_001161610).2 promoter-TSS (NM_001161610).2 -467 NM_001161609 545654 Mm.478784 NM_001161609 ENSMUSG00000095101 Gm13285 OTTMUSG00000011282|limitin predicted gene 13285 protein-coding common_peak1_28_244_-0.587974624490003_7.64265062675757_3.82501082073516 chr3 135593988 135594370 + 3.82501082073516 NA intron (NM_008689, intron 19 of 24) intron (NM_008689, intron 19 of 24) 97368 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_62_313_0.426988411060155_8.50811495442171_3.82411453967173 chr15 76232036 76233282 + 3.82411453967173 NA TTS (NM_001163576) TTS (NM_001163576) -1281 NM_011117 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_56_271_0.457035878299834_8.31598078040026_3.82392071515338 chr9 107279690 107280605 + 3.82392071515338 NA intron (NM_001316691, intron 1 of 7) intron (NM_001316691, intron 1 of 7) 9249 NM_001316691 102626 Mm.222612 NM_178907 ENSMUSG00000032577 Mapkapk3 3PK|AI874665|MAPKAP-K3|MAPKAP3|MK-3|MK3|MapkKapk3 mitogen-activated protein kinase-activated protein kinase 3 protein-coding unique_peak2_14_130_-0.851378880126102_6.6077335614744_3.82362800775198 chr2 22801880 22802680 + 3.82362800775198 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 27953 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak1_14_130_-0.851378880126102_6.6077335614744_3.82362800775198-2 chr6 72937009 72937403 + 3.82362800775198 NA Intergenic Intergenic 21026 NM_001039392 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding unique_peak2_14_130_-0.851378880126102_6.6077335614744_3.82362800775198-2 chr5 118400264 118401409 + 3.82362800775198 NA Intergenic RMER13B|LTR|ERVK 155609 NM_001081236 76792 Mm.103428 NM_001081236 ENSMUSG00000032840 2410131K14Rik - RIKEN cDNA 2410131K14 gene protein-coding common_peak1_14_130_-0.851378880126102_6.6077335614744_3.82362800775198 chr19 11036870 11037261 + 3.82362800775198 NA Intergenic L1_Mus3|LINE|L1 13501 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA common_peak1_161_1562_-0.217147668820429_10.5015282285895_3.82176061289076 chr6 54947966 54949998 + 3.82176061289076 NA intron (NM_172729, intron 2 of 11) intron (NM_172729, intron 2 of 11) 22679 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak1_20_178_-0.706341133465759_7.13064521053138_3.82058805061996 chr19 43524034 43524632 + 3.82058805061996 NA intron (NM_010324, intron 1 of 8) intron (NM_010324, intron 1 of 8) 272 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak2_50_437_-0.427116282473717_8.56122891836431_3.82001980593057 chr7 44894852 44896869 + 3.82001980593057 NA promoter-TSS (NM_027376) promoter-TSS (NM_027376) -219 NM_027376 70300 Mm.276298 NM_027376 ENSMUSG00000011658 Fuz 2600013E07Rik|b2b1273Clo fuzzy planar cell polarity protein protein-coding common_peak2_293_3102_-0.151824917278397_11.5235355228895_3.81976461883486 chr6 120036572 120040461 + 3.81976461883486 NA 5' UTR (NM_001185020, exon 1 of 26) 5' UTR (NM_001185020, exon 1 of 26) 139 NM_001199083 232341 Mm.333349 NM_198703 ENSMUSG00000045962 Wnk1 6430573H23Rik|EG406236|Hsn2|Prkwnk1|mKIAA0344 WNK lysine deficient protein kinase 1 protein-coding common_peak2_238_2439_-0.17156091835767_11.1668849732714_3.81748162825635 chr5 124049432 124053074 + 3.81748162825635 NA Intergenic L1MB5|LINE|L1 -18993 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_72_386_0.386129270241218_8.78925439126502_3.81719714866918 chr1 86344057 86345360 + 3.81719714866918 NA TTS (NM_010880) TTS (NM_010880) 6577 NR_028478 100303740 Mm.154378 NR_028478 ENSMUSG00000064837 Snora75 MBI-55 small nucleolar RNA, H/ACA box 75 snoRNA common_peak2_72_386_0.386129270241218_8.78925439126502_3.81719714866918-2 chr5 24603779 24605528 + 3.81719714866918 NA Intergenic CpG -2651 NM_025891 66993 Mm.436539 NM_025891 ENSMUSG00000028949 Smarcd3 1500001J14Rik|2210409C08Rik|BAF60C SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding common_peak2_72_386_0.386129270241218_8.78925439126502_3.81719714866918 chr18 56469115 56471463 + 3.81719714866918 NA intron (NM_026240, intron 2 of 13) ID4|SINE|ID 38157 NM_026240 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|NS3TP2 GRAM domain containing 3 protein-coding common_peak2_103_630_0.307149672031095_9.4550710309981_3.81674108408433 chr5 76588335 76589653 + 3.81674108408433 NA Intergenic CpG -2720 NM_199032 381644 Mm.332452 NM_199032 ENSMUSG00000036403 Cep135 BC062951|Cep4|Gm1044 centrosomal protein 135 protein-coding common_peak2_715_7811_0.0912929739086898_12.9771227208411_3.81625900207126 chr6 128833077 128841313 + 3.81625900207126 NA Intergenic Intergenic -10880 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak2_159_1125_0.233980049109615_10.253981136635_3.81623463690575 chr8 22592830 22594621 + 3.81623463690575 NA promoter-TSS (NM_001198998) promoter-TSS (NM_001198998) 88 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak2_40_347_-0.481500230783303_8.20219338045708_3.81610178548718 chr5 115118779 115120033 + 3.81610178548718 NA promoter-TSS (NM_007383) promoter-TSS (NM_007383) -60 NM_007383 11409 Mm.18759 NM_007383 ENSMUSG00000029545 Acads AI196007|Bcd-1|Bcd1|Hdlq8|SCAD acyl-Coenzyme A dehydrogenase, short chain protein-coding common_peak2_70_623_-0.352242673015231_9.10928088235463_3.81594693652889 chr9 50851986 50853864 + 3.81594693652889 NA Intergenic Intergenic -3999 NM_001034085 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak2_241_2475_-0.17061644339246_11.188487377518_3.81573452595025 chr10 40347295 40350503 + 3.81573452595025 NA promoter-TSS (NM_001168304) promoter-TSS (NM_001168304) -409 NM_001291817 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak1_43_374_-0.464336731502936_8.31857841963178_3.81292169005349-2 chr5 124445598 124446459 + 3.81292169005349 NA promoter-TSS (NM_001310727) promoter-TSS (NM_001310727) 529 NM_001310723 67956 Mm.137966 NM_030241 ENSMUSG00000049327 Kmt5a 2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8 lysine methyltransferase 5A protein-coding common_peak2_43_374_-0.464336731502936_8.31857841963178_3.81292169005349 chr4 59531403 59533089 + 3.81292169005349 NA intron (NM_178164, intron 1 of 13) intron (NM_178164, intron 1 of 13) 17118 NM_178164 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding common_peak1_43_374_-0.464336731502936_8.31857841963178_3.81292169005349 chr4 43558841 43559418 + 3.81292169005349 NA intron (NM_011602, intron 1 of 56) intron (NM_011602, intron 1 of 56) 3454 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding common_peak1_102_622_0.308459530752737_9.43731811840037_3.81271246391628 chr16 21332630 21333969 + 3.81271246391628 NA promoter-TSS (NR_131983) promoter-TSS (NR_131983) 57 NR_131983 76222 Mm.86031 NR_131983 Magef1 6430590I03Rik melanoma antigen family F, 1 pseudo common_peak2_62_547_-0.376422923008745_8.90982062145616_3.81227764208318 chr17 25578486 25580005 + 3.81227764208318 NA promoter-TSS (NM_029624) promoter-TSS (NM_029624) 71 NR_045520 76483 Mm.12787 NM_029624 ENSMUSG00000002279 Lmf1 2400010G15Rik|AW822050|Tmem112|cld lipase maturation factor 1 protein-coding common_peak2_255_2089_0.173415280902347_11.1159948674194_3.81111596464706 chr12 99940902 99944335 + 3.81111596464706 NA intron (NM_028354, intron 14 of 15) intron (NM_028354, intron 14 of 15) -21881 NM_001164426 217826 Mm.312335 NM_146037 ENSMUSG00000045404 Kcnk13 BB085247|F730021E22Rik|Gm1570|Gm1685 potassium channel, subfamily K, member 13 protein-coding unique_peak2_35_303_-0.516629840384562_7.9896125932513_3.81107375949444 chr14 66235213 66236607 + 3.81107375949444 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -22358 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_224_1765_0.188014596794487_10.8802769260457_3.81106307192374 chr7 123123570 123124824 + 3.81106307192374 NA 5' UTR (NM_144925, exon 1 of 24) 5' UTR (NM_144925, exon 1 of 24) 312 NM_144925 233833 Mm.102305 NM_144925 ENSMUSG00000052707 Tnrc6a 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6 trinucleotide repeat containing 6a protein-coding common_peak2_100_605_0.313674210132506_9.40001108853921_3.81049526661395 chr1 131866928 131868180 + 3.81049526661395 NA 5' UTR (NM_144875, exon 2 of 6) 5' UTR (NM_144875, exon 2 of 6) 277 NM_144875 226422 Mm.34027 NM_144875 ENSMUSG00000026433 Rab29 Rab7l1 RAB29, member RAS oncogene family protein-coding common_peak1_100_605_0.313674210132506_9.40001108853921_3.81049526661395 chr8 20424043 20424880 + 3.81049526661395 NA intron (NR_028428, intron 1 of 5) CpG 353 NR_028428 381598 Mm.359054 NM_001024708 ENSMUSG00000071793 2610005L07Rik 2810038F24Rik|6720476A01Rik cadherin 11 pseudogene pseudo common_peak2_52_244_0.479103826440541_8.17618985222284_3.80975666410914 chr15 99329416 99330787 + 3.80975666410914 NA intron (NM_001310622, intron 5 of 25) intron (NM_001310622, intron 5 of 25) 34692 NM_018786 54614 Mm.358668 NM_018786 ENSMUSG00000023007 Prpf40b 2610317D23Rik|Hypc pre-mRNA processing factor 40B protein-coding common_peak1_52_244_0.479103826440541_8.17618985222284_3.80975666410914 chr11 86578753 86579784 + 3.80975666410914 NA Intergenic Intergenic 4890 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_38_155_0.587541230745612_7.57917283423505_3.80922724362115 chr14 55659841 55660504 + 3.80922724362115 NA exon (NM_023397, exon 2 of 6) exon (NM_023397, exon 2 of 6) 336 NM_023397 67881 Mm.24601 NM_023397 ENSMUSG00000002329 Mdp1 1810034K20Rik|AI035604 magnesium-dependent phosphatase 1 protein-coding common_peak1_103_948_-0.281618410007466_9.74945507201738_3.80911038273289 chr2 180437371 180438713 + 3.80911038273289 NA Intergenic Intergenic -22936 NM_148933 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding common_peak2_113_714_0.289311599070778_9.62645523120114_3.80758747209202-2 chr9 87021504 87023106 + 3.80758747209202 NA intron (NM_024195, intron 1 of 15) CpG 276 NM_024195 266690 Mm.30166 NM_024195 ENSMUSG00000032872 Cyb5r4 2810034J18Rik|B5+B5R|C79736|Cb5cb5r|Ncb5or|b5/b5r|b5b5r cytochrome b5 reductase 4 protein-coding common_peak2_113_714_0.289311599070778_9.62645523120114_3.80758747209202 chr5 115631090 115632921 + 3.80758747209202 NA promoter-TSS (NR_027810) promoter-TSS (NR_027810) 18 NM_198163 77407 Mm.27553 NM_198163 ENSMUSG00000029518 Rab35 9530019H02Rik|AU040256|H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding common_peak2_73_651_-0.342332191833311_9.17756205831442_3.8075386188932 chr4 155733859 155735956 + 3.8075386188932 NA 5' UTR (NM_001101506, exon 1 of 4) 5' UTR (NM_001101506, exon 1 of 4) 103 NM_001101506 381582 Mm.379515 NM_001101506 ENSMUSG00000084845 Tmem240 EG381582|Gm5151 transmembrane protein 240 protein-coding common_peak1_176_1287_0.218744043080491_10.4402888996549_3.80745714401766 chr13 52571363 52573547 + 3.80745714401766 NA intron (NR_046069, intron 1 of 3) MIRb|SINE|MIR 770 NR_046069 100040572 Mm.278873 NR_046069 Gm2848 - predicted gene 2848 ncRNA unique_peak2_63_556_-0.372055631842152_8.93550570141896_3.80698760716085 chr4 101243461 101245908 + 3.80698760716085 NA intron (NM_146145, intron 1 of 24) (CA)n|Simple_repeat|Simple_repeat 20598 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_123_1154_-0.253770309196401_10.0467919817052_3.80611651602091 chr16 15636459 15638514 + 3.80611651602091 NA promoter-TSS (NM_011159) promoter-TSS (NM_011159) -86 NM_008565 17217 Mm.1500 NM_008565 ENSMUSG00000022673 Mcm4 19G|AI325074|AU045576|Cdc21|Mcmd4|mKIAA4003|mcdc21 minichromosome maintenance complex component 4 protein-coding common_peak1_217_2193_-0.180993263687201_11.0088511785596_3.8048124473055 chr11 50130718 50132544 + 3.8048124473055 NA intron (NM_001290759, intron 1 of 21) CpG 271 NM_029745 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding common_peak1_33_126_0.641463885388362_7.30941662946635_3.80456164044763 chr5 38857787 38858498 + 3.80456164044763 NA intron (NM_013748, intron 2 of 18) MLT1A0|LTR|ERVL-MaLR 18551 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak2_33_126_0.641463885388362_7.30941662946635_3.80456164044763 chr12 115691473 115692387 + 3.80456164044763 NA Intergenic Intergenic 3864 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA unique_peak2_6_68_-1.27518432913295_5.47093229221169_3.80422935433822 chr18 39496733 39497290 + 3.80422935433822 NA Intergenic Intergenic -9766 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak2_6_68_-1.27518432913295_5.47093229221169_3.80422935433822-2 chr9 95314812 95315497 + 3.80422935433822 NA Intergenic Intergenic 92116 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak1_76_416_0.372817967328404_8.89031255710886_3.80341667960633 chr2 84504591 84505869 + 3.80341667960633 NA intron (NR_046046, intron 1 of 2) IAPLTR1_Mm|LTR|ERVK 1643 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 OTTMUSG00000013441 predicted gene 13710 ncRNA common_peak1_57_500_-0.393391167496283_8.77197120944707_3.80209876503719 chr4 106970071 106971051 + 3.80209876503719 NA intron (NM_198438, intron 4 of 16) intron (NM_198438, intron 4 of 16) 59091 NM_023672 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak2_113_1050_-0.266435923225647_9.90432899234935_3.8019475408146 chr11 3265510 3267261 + 3.8019475408146 NA promoter-TSS (NM_007879) promoter-TSS (NM_007879) 1 NM_007879 13494 Mm.3250 NM_007879 ENSMUSG00000020457 Drg1 AA408859|AI132520|Nedd3 developmentally regulated GTP binding protein 1 protein-coding common_peak2_25_83_0.763103821862171_6.77386933370985_3.80183679312905-4 chr6 119396461 119397117 + 3.80183679312905 NA intron (NM_197985, intron 1 of 7) intron (NM_197985, intron 1 of 7) 20694 NM_197985 68465 Mm.291826 NM_197985 ENSMUSG00000030168 Adipor2 1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2 adiponectin receptor 2 protein-coding common_peak2_25_83_0.763103821862171_6.77386933370985_3.80183679312905 chr2 66123865 66124595 + 3.80183679312905 NA intron (NM_015736, intron 1 of 10) CpG 563 NM_015736 14425 Mm.439760 NM_015736 ENSMUSG00000026994 Galnt3 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 protein-coding common_peak2_25_83_0.763103821862171_6.77386933370985_3.80183679312905-2 chr2 122764872 122765693 + 3.80183679312905 NA promoter-TSS (NM_001162503) promoter-TSS (NM_001162503) -77 NM_001162503 59010 Mm.28986 NM_021507 ENSMUSG00000005803 Sqrdl 0610039J17Rik|4930557M22Rik|SQOR sulfide quinone reductase-like (yeast) protein-coding common_peak2_25_83_0.763103821862171_6.77386933370985_3.80183679312905-3 chr4 136148213 136148891 + 3.80183679312905 NA Intergenic CpG 4730 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak2_251_2047_0.174833782324493_11.0874168911622_3.80150535553476 chr14 73044988 73050394 + 3.80150535553476 NA intron (NM_001162412, intron 2 of 4) intron (NM_001162412, intron 2 of 4) 1423 NM_133720 70086 Mm.158324 NM_133720 ENSMUSG00000033470 Cysltr2 2300001H05Rik|CYSLT2R|Cltr2|Cyslt2 cysteinyl leukotriene receptor 2 protein-coding unique_peak2_9_90_-1.04327272375428_5.98615827832156_3.80075004868472 chr4 42735039 42735649 + 3.80075004868472 NA Intergenic Intergenic 21174 NM_011888 24047 Mm.6660 NM_011888 ENSMUSG00000071005 Ccl19 CKb11|ELC|MIP3B|Scya19|exodus-3 chemokine (C-C motif) ligand 19 protein-coding common_peak1_52_454_-0.413980969642946_8.62273225026459_3.80060970020219 chr7 141194172 141195034 + 3.80060970020219 NA promoter-TSS (NM_153777) promoter-TSS (NM_153777) 473 NM_001172064 70552 Mm.45104 NM_153777 ENSMUSG00000038637 Lrrc56 5730427C23Rik|BB110509|mFLJ00101 leucine rich repeat containing 56 protein-coding common_peak2_44_382_-0.455021944360325_8.35368960974479_3.80046975515402 chr13 113197339 113198765 + 3.80046975515402 NA Intergenic Intergenic -11607 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding common_peak2_27_93_0.731975898340288_6.92057680084778_3.800213047969 chr8 95141863 95142625 + 3.800213047969 NA intron (NM_010631, intron 1 of 19) intron (NM_010631, intron 1 of 19) 296 NM_010631 16582 Mm.378951 NM_010631 ENSMUSG00000031788 Kifc3 AI325457|BB123200 kinesin family member C3 protein-coding common_peak1_27_93_0.731975898340288_6.92057680084778_3.800213047969 chr17 28924560 28925137 + 3.800213047969 NA Intergenic Intergenic -9524 NM_172450 207819 Mm.248931 NM_172450 ENSMUSG00000048905 4930539E08Rik 9130014G02 RIKEN cDNA 4930539E08 gene protein-coding common_peak1_27_93_0.731975898340288_6.92057680084778_3.800213047969-2 chr3 95650140 95650787 + 3.800213047969 NA Intergenic ID_B1|SINE|B4 -8258 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak1_216_1683_0.192541890933381_10.8139473685331_3.80020645887095 chr12 82245481 82247827 + 3.80020645887095 NA intron (NM_001167983, intron 2 of 23) L1M4c|LINE|L1 -64695 NM_172579 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak2_78_431_0.367211588949848_8.93849329663839_3.79985161014275 chr11 80071757 80073730 + 3.79985161014275 NA intron (NM_018776, intron 1 of 7) intron (NM_018776, intron 1 of 7) 8248 NM_001277106 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding common_peak1_48_218_0.502089177309511_8.02583164825593_3.79979730282162 chr8 77486630 77487649 + 3.79979730282162 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -29917 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak2_38_329_-0.493378764637955_8.11963283192684_3.79865231269246 chr9 64281135 64282215 + 3.79865231269246 NA promoter-TSS (NM_025372) promoter-TSS (NM_025372) 68 NM_025372 66131 Mm.196219 NM_025372 ENSMUSG00000032397 Tipin 1110005A05Rik|1110018P21Rik timeless interacting protein protein-coding common_peak1_97_887_-0.290927318253065_9.64895220722357_3.79641582227986 chr17 47593488 47594613 + 3.79641582227986 NA intron (NM_007632, intron 1 of 4) intron (NM_007632, intron 1 of 4) 583 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_135_1280_-0.239681565808405_10.2032139774374_3.79633872087759 chr10 19497438 19499113 + 3.79633872087759 NA Intergenic Intergenic -93683 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_152_1463_-0.223894545003303_10.4037525657824_3.79554051897211 chr3 90508511 90509788 + 3.79554051897211 NA intron (NM_001293776, intron 1 of 5) C-rich|Low_complexity|Low_complexity 349 NM_001293776 66511 Mm.154136 NM_023215 ENSMUSG00000001017 Chtop 2500003M10Rik|Fop|Srag chromatin target of PRMT1 protein-coding common_peak2_458_4438_0.119920816108928_12.1759794013796_3.79524750585327 chr10 118080079 118088291 + 3.79524750585327 NA Intergenic Intergenic -57602 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak1_33_286_-0.53475835451516_7.89752774941811_3.79478600782453 chr19 46396883 46397476 + 3.79478600782453 NA exon (NM_001025391, exon 1 of 12) exon (NM_001025391, exon 1 of 12) 283 NM_015752 24069 Mm.41210 NM_015752 ENSMUSG00000025231 Sufu Su(fu) suppressor of fused homolog (Drosophila) protein-coding common_peak2_81_454_0.358332841165725_9.00888915566892_3.79468974540747 chr10 93342376 93344567 + 3.79468974540747 NA intron (NR_038014, intron 1 of 2) ID4|SINE|ID 7239 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak1_183_1805_-0.200284439828279_10.7184399575667_3.79468641109767 chr1 85731635 85733947 + 3.79468641109767 NA intron (NM_177055, intron 1 of 5) Lx8|LINE|L1 3815 NM_177055 319997 Mm.116691 NM_177055 ENSMUSG00000052760 A630001G21Rik - RIKEN cDNA A630001G21 gene protein-coding common_peak1_96_877_-0.292738766171949_9.63170774644938_3.79434368609064 chr2 69897242 69898104 + 3.79434368609064 NA exon (NM_177783, exon 1 of 39) exon (NM_177783, exon 1 of 39) 427 NM_177783 68795 Mm.314576 NM_177783 ENSMUSG00000044308 Ubr3 1110059H15Rik|4833421P10Rik|A130030D10Rik|AA409735|AA414972|AA422631|AI646861|AU016126|Zfp650|Znf650 ubiquitin protein ligase E3 component n-recognin 3 protein-coding common_peak1_276_2315_0.164800511058294_11.2598197935184_3.79431680676102 chr15 25983751 25985502 + 3.79431680676102 NA exon (NM_144523, exon 1 of 6) exon (NM_144523, exon 1 of 6) 260 NM_144523 52521 Mm.29145 NM_144523 ENSMUSG00000052253 Zfp622 1110033B05Rik|D15Ertd806e|ZPR9|Znf622 zinc finger protein 622 protein-coding common_peak1_41_174_0.552875843152526_7.72764903340859_3.79363658487979 chr1 152019315 152020055 + 3.79363658487979 NA intron (NM_197990, intron 1 of 5) RCHARR1|DNA|hAT-Charlie 70635 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak1_374_3425_0.135945859083987_11.810282365626_3.79360089993326 chr13 113614277 113618644 + 3.79360089993326 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 2104 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak1_77_690_-0.332986139594041_9.26604883059124_3.79293573520074 chr1 85651585 85652720 + 3.79293573520074 NA intron (NM_013673, intron 1 of 19) intron (NM_013673, intron 1 of 19) 2164 NM_001313714 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding common_peak2_77_690_-0.332986139594041_9.26604883059124_3.79293573520074 chr9 123151412 123152982 + 3.79293573520074 NA intron (NM_011606, intron 1 of 2) intron (NM_011606, intron 1 of 2) 1251 NM_011606 21922 Mm.34588 NM_011606 ENSMUSG00000025784 Clec3b Tna C-type lectin domain family 3, member b protein-coding unique_peak1_18_49_0.956508013622166_6.12211019658581_3.79235856330035-2 chr14 66265245 66265682 + 3.79235856330035 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) 15589 NM_172498 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_18_49_0.956508013622166_6.12211019658581_3.79235856330035 chr1 153083404 153083934 + 3.79235856330035 NA intron (NM_175460, intron 4 of 10) intron (NM_175460, intron 4 of 10) 102778 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak1_18_49_0.956508013622166_6.12211019658581_3.79235856330035-2 chr3 18664642 18665074 + 3.79235856330035 NA Intergenic Intergenic -184381 NR_040544 73959 Mm.60616 NR_040544 ENSMUSG00000102699 4930433B08Rik - RIKEN cDNA 4930433B08 gene ncRNA unique_peak1_18_49_0.956508013622166_6.12211019658581_3.79235856330035 chr13 24506906 24507305 + 3.79235856330035 NA Intergenic Intergenic -75084 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_134_1269_-0.240299627941614_10.1904629676887_3.79160572156452 chr4 139191287 139192777 + 3.79160572156452 NA promoter-TSS (NM_009798) promoter-TSS (NM_009798) -867 NM_009798 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_65_575_-0.365992742595076_8.98692863014477_3.79134359450088 chr10 98683820 98684744 + 3.79134359450088 NA Intergenic Intergenic -230870 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak2_165_1182_0.227883822014915_10.3221762693472_3.79061742162541 chr11 16507255 16509053 + 3.79061742162541 NA exon (NM_011343, exon 1 of 4) exon (NM_011343, exon 1 of 4) 330 NM_011343 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding common_peak1_31_115_0.664884579183952_7.19042328471955_3.79004446460987 chr6 148946344 148946956 + 3.79004446460987 NA promoter-TSS (NM_019643) promoter-TSS (NM_019643) -218 NM_019643 56306 Mm.18637 NM_019643 ENSMUSG00000039985 Fam60a Ppcs1|Pptcs1|Tera family with sequence similarity 60, member A protein-coding common_peak2_87_501_0.341478811115891_9.14228295950872_3.78991292753739 chr6 122800722 122802384 + 3.78991292753739 NA Intergenic CpG -18631 NM_021899 60611 Mm.87142 NM_021899 ENSMUSG00000003154 Foxj2 Fhx forkhead box J2 protein-coding common_peak1_87_501_0.341478811115891_9.14228295950872_3.78991292753739 chrX 140519704 140521506 + 3.78991292753739 NA Intergenic Intergenic 22063 NR_122039 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding common_peak1_93_847_-0.298177055950823_9.57883192658779_3.78952014291007 chr1 179545675 179547026 + 3.78952014291007 NA promoter-TSS (NM_146105) promoter-TSS (NM_146105) -83 NM_008249 15278 Mm.293529 NM_008249 ENSMUSG00000026492 Tfb2m Hkp1 transcription factor B2, mitochondrial protein-coding unique_peak1_22_68_0.829936347315341_6.52349263043584_3.78932079423842 chr12 73701252 73701765 + 3.78932079423842 NA intron (NM_001313977, intron 8 of 14) ID4_|SINE|ID 116712 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_58_286_0.440619478366138_8.38521666585876_3.78922282321042 chr2 166617914 166618909 + 3.78922282321042 NA intron (NM_177782, intron 6 of 39) MTE2b|LTR|ERVL-MaLR -54307 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_58_286_0.440619478366138_8.38521666585876_3.78922282321042-2 chr8 125013044 125013784 + 3.78922282321042 NA intron (NM_016909, intron 1 of 5) CpG 417 NM_016909 53424 Mm.5248 NM_016909 ENSMUSG00000056820 Tsnax R74833|Trax translin-associated factor X protein-coding common_peak2_151_1452_-0.224617850676884_10.3925100622944_3.78916074835615 chr4 132767528 132769657 + 3.78916074835615 NA intron (NM_011284, intron 1 of 8) CpG 232 NM_011284 19891 Mm.2870 NM_011284 ENSMUSG00000028884 Rpa2 AA409079|AI325195|AU020965|RPA34|Rf-A2 replication protein A2 protein-coding common_peak1_208_1603_0.196287190069823_10.7456020214898_3.78876487856723 chr7 109518145 109520234 + 3.78876487856723 NA promoter-TSS (NR_028079) promoter-TSS (NR_028079) -6 NM_011975 26451 Mm.305750 NM_011975 ENSMUSG00000046364 Rpl27a L27'|L27A|L29 ribosomal protein L27A protein-coding common_peak2_82_738_-0.319924684977803_9.36946821165725_3.78828714790838 chrX 8131297 8133360 + 3.78828714790838 NA 5' UTR (NM_028542, exon 1 of 9) 5' UTR (NM_028542, exon 1 of 9) 530 NM_001290783 73447 Mm.284162 NM_026137 ENSMUSG00000031166 Wdr13 1700060B08Rik|5730411P10Rik|DXHXS7467e|W51679|mMg21 WD repeat domain 13 protein-coding common_peak1_41_356_-0.475693309044244_8.24193360950698_3.7881584323824 chr6 40471336 40471756 + 3.7881584323824 NA promoter-TSS (NM_001286664) promoter-TSS (NM_001286664) 78 NM_001286663 381760 Mm.276356 NM_028358 ENSMUSG00000029911 Ssbp1 2810480P10Rik|G630031O20Rik|MtSSB|mtDBP single-stranded DNA binding protein 1 protein-coding common_peak2_53_463_-0.409161117101622_8.65340043657676_3.78796358104841 chr15 30609782 30611759 + 3.78796358104841 NA intron (NM_008729, intron 3 of 22) intron (NM_008729, intron 3 of 22) -428356 NR_045186 73784 Mm.66947 NR_045186 4930430F21Rik - RIKEN cDNA 4930430F21 gene ncRNA common_peak2_414_3901_0.127613393437642_11.9938047593278_3.78770013394811 chr5 73252572 73257996 + 3.78770013394811 NA intron (NM_028194, intron 1 of 62) intron (NM_028194, intron 1 of 62) 1334 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak2_29_104_0.694410914931581_7.06145097513191_3.78737851618829 chr2 167962176 167963050 + 3.78737851618829 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 30286 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_29_104_0.694410914931581_7.06145097513191_3.78737851618829 chr1 21078545 21079215 + 3.78737851618829 NA intron (NM_177409, intron 1 of 10) CpG 345 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding common_peak1_29_104_0.694410914931581_7.06145097513191_3.78737851618829-2 chr4 56864687 56865233 + 3.78737851618829 NA intron (NM_018761, intron 1 of 18) CpG 251 NM_018761 54366 Mm.218891 NM_018761 ENSMUSG00000038816 Ctnnal1 ACRP|AI616177|AW545119|C86009|Catnal1 catenin (cadherin associated protein), alpha-like 1 protein-coding unique_peak2_29_104_0.694410914931581_7.06145097513191_3.78737851618829 chr11 50125080 50126264 + 3.78737851618829 NA TTS (NM_001290750) TTS (NM_001290750) -5688 NM_001290759 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding common_peak1_178_1749_-0.203594621296922_10.6713418960712_3.78734089825254 chr2 152226085 152227659 + 3.78734089825254 NA promoter-TSS (NM_007788) promoter-TSS (NM_007788) 32 NM_007788 12995 Mm.23692 NM_007788 ENSMUSG00000074698 Csnk2a1 Csnk2a1-rs4 casein kinase 2, alpha 1 polypeptide protein-coding common_peak2_84_478_0.347760002116312_9.07776184679433_3.78716106120529 chr2 32541396 32543657 + 3.78716106120529 NA intron (NM_153560, intron 1 of 10) intron (NM_153560, intron 1 of 10) 7167 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak2_89_807_-0.305420534000808_9.50550121575139_3.78667810551423 chr11 62677922 62679945 + 3.78667810551423 NA Intergenic L1MB8|LINE|L1 30269 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding common_peak1_83_748_-0.318122642287539_9.38976058731498_3.78632691523902 chr9 103111025 103112540 + 3.78632691523902 NA promoter-TSS (NM_173781) promoter-TSS (NM_173781) -292 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding common_peak1_31_269_-0.553950022739308_7.79984058568118_3.78497527403701 chrX 18164199 18164800 + 3.78497527403701 NA intron (NM_001310444, intron 2 of 28) intron (NM_001310444, intron 2 of 28) 1924 NM_001310444 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak1_18_161_-0.739485799487734_6.97010710314076_3.78470900341135 chr5 113634652 113635060 + 3.78470900341135 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 15534 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding unique_peak2_18_161_-0.739485799487734_6.97010710314076_3.78470900341135 chr5 103762641 103763731 + 3.78470900341135 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 8613 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak1_22_194_-0.6688695096561_7.27289555892156_3.78361681162865 chr1 170907783 170908380 + 3.78361681162865 NA exon (NM_001029984, exon 5 of 6) exon (NM_001029984, exon 5 of 6) 4860 NM_001029984 435653 Mm.337931 NM_001029984 ENSMUSG00000070524 Fcrlb FREB-2|FREB2|FcRL2|Fcrlm2|Fcry|mFCRL2 Fc receptor-like B protein-coding common_peak1_550_6483_-0.103444875987826_12.6109459375236_3.7833457084998 chr16 92823049 92827451 + 3.7833457084998 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 824 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_382_3519_0.134250583403759_11.8484850052265_3.78323591780311 chr13 113613747 113618714 + 3.78323591780311 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 2334 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak1_29_252_-0.574337142096607_7.69582500364601_3.78308677129339 chr7 28694315 28694851 + 3.78308677129339 NA intron (NM_207238, intron 2 of 5) intron (NM_207238, intron 2 of 5) 1439 NM_001163702 233040 Mm.116116 NM_207238 ENSMUSG00000037463 Fbxo27 E130008B10Rik|FBG5|Gm161 F-box protein 27 protein-coding common_peak1_332_2939_0.146452243794251_11.5948265616209_3.78169125796578 chr11 100938687 100940448 + 3.78169125796578 NA promoter-TSS (NM_011486) promoter-TSS (NM_011486) -27 NM_011486 20848 Mm.249934 NM_011486 ENSMUSG00000004040 Stat3 1110034C02Rik|AW109958|Aprf signal transducer and activator of transcription 3 protein-coding common_peak2_164_1593_-0.213010379451271_10.5319307242648_3.78115282665332 chr7 25717353 25720181 + 3.78115282665332 NA intron (NM_028771, intron 1 of 4) intron (NM_028771, intron 1 of 4) 286 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak1_106_977_-0.27472023559646_9.796330537154_3.78071701491867 chr4 11682533 11684353 + 3.78071701491867 NA Intergenic Intergenic -21004 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding common_peak2_45_199_0.521216925505141_7.9044646525273_3.78024759507181 chr5 53490292 53491867 + 3.78024759507181 NA Intergenic Intergenic -64700 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak1_59_293_0.435596398947697_8.41747054431021_3.77910171298548 chr16 91412311 91413237 + 3.77910171298548 NA intron (NM_008349, intron 3 of 6) intron (NM_008349, intron 3 of 6) 6539 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding common_peak1_49_427_-0.428839483078406_8.52704724486194_3.77648035858683 chr4 56946659 56947479 + 3.77648035858683 NA exon (NM_175518, exon 1 of 18) exon (NM_175518, exon 1 of 18) 360 NM_175518 242474 Mm.296632 NM_175518 ENSMUSG00000055296 Tmem245 A630051L19Rik|AI957324|D730040F13Rik transmembrane protein 245 protein-coding common_peak1_184_1365_0.212147469799641_10.5218155031899_3.77388603072787 chr2 101754836 101756745 + 3.77388603072787 NA intron (NM_175181, intron 4 of 8) intron (NM_175181, intron 4 of 8) 41917 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_42_364_-0.466025483513429_8.27873991201066_3.77355134757662 chr15 60121274 60122067 + 3.77355134757662 NA Intergenic Intergenic -105052 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_42_364_-0.466025483513429_8.27873991201066_3.77355134757662-2 chr3 125228276 125228699 + 3.77355134757662 NA Intergenic RMER6D|LTR|ERVK -175604 NM_022565 64580 Mm.444289 NM_022565 ENSMUSG00000027971 Ndst4 4930439H17Rik N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4 protein-coding common_peak1_36_312_-0.510235195721208_8.03490124907201_3.77322242257565 chr10 118796403 118797175 + 3.77322242257565 NA Intergenic Intergenic 72114 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak2_36_312_-0.510235195721208_8.03490124907201_3.77322242257565 chr7 131560157 131561159 + 3.77322242257565 NA intron (NM_009774, intron 1 of 7) CpG 267 NM_009774 12237 Mm.927 NM_009774 ENSMUSG00000066979 Bub3 AU019800|AU021329|AU043350|AW146323|C78067 BUB3 mitotic checkpoint protein protein-coding common_peak2_148_1418_-0.225733871952931_10.3577919380841_3.77304406637962 chr17 35968818 35970977 + 3.77304406637962 NA promoter-TSS (NM_013854) promoter-TSS (NM_013854) -147 NM_013854 224742 Mm.329022 NM_013854 ENSMUSG00000038762 Abcf1 AU041969|Abc50|D17Wsu166e|GCN20 ATP-binding cassette, sub-family F (GCN20), member 1 protein-coding common_peak1_223_1756_0.187503207568618_10.8726500797927_3.77282053023094 chr13 96542189 96544109 + 3.77282053023094 NA promoter-TSS (NM_012048) promoter-TSS (NM_012048) 414 NM_023420 68018 Mm.24125 NM_023420 ENSMUSG00000021669 Col4a3bp 2810404O15Rik|9230101K08Rik|AU016711|CERT|GPBP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein-coding common_peak2_137_925_0.254339248172915_9.98203800734669_3.77138422667621 chr5 121190475 121192163 + 3.77138422667621 NA promoter-TSS (NM_001109992) promoter-TSS (NM_001109992) 78 NM_001109992 19247 Mm.8681 NM_011202 ENSMUSG00000043733 Ptpn11 2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp protein tyrosine phosphatase, non-receptor type 11 protein-coding common_peak2_60_300_0.430899774287271_8.44906956390334_3.7700340401007 chr10 76269363 76270999 + 3.7700340401007 NA intron (NM_001081419, intron 33 of 37) intron (NM_001081419, intron 33 of 37) 16345 NM_009115 20203 Mm.235998 NM_009115 ENSMUSG00000033208 S100b AI850290|Bpb S100 protein, beta polypeptide, neural protein-coding common_peak1_238_2437_-0.170377896527635_11.1662934623564_3.76762488180563 chr14 54220712 54222430 + 3.76762488180563 NA Intergenic Intergenic 32358 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_39_338_-0.487394924319211_8.16144400097674_3.76735447538109 chr6 35373489 35374326 + 3.76735447538109 NA Intergenic MTEb|LTR|ERVL-MaLR 43061 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA common_peak1_34_294_-0.52312542972567_7.94300842938637_3.76648222352289 chr12 65075595 65076204 + 3.76648222352289 NA exon (NM_178912, exon 1 of 23) exon (NM_178912, exon 1 of 23) 293 NM_178912 104806 Mm.374847 NM_178912 ENSMUSG00000055884 Fancm AI427100|C730036B14Rik|D12Ertd364e Fanconi anemia, complementation group M protein-coding common_peak1_21_185_-0.67936106841408_7.19947827690099_3.76644002165554 chr15 76870866 76871378 + 3.76644002165554 NA 5' UTR (NM_001007568, exon 1 of 4) 5' UTR (NM_001007568, exon 1 of 4) 313 NM_001007568 71591 Mm.38195 NM_001007568 ENSMUSG00000022526 Zfp251 9130001M19Rik|AV339307 zinc finger protein 251 protein-coding unique_peak2_21_185_-0.67936106841408_7.19947827690099_3.76644002165554-2 chr3 51653738 51655197 + 3.76644002165554 NA Intergenic Intergenic -6712 NM_174995 211666 Mm.24679 NM_174995 ENSMUSG00000074604 Mgst2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding unique_peak2_21_185_-0.67936106841408_7.19947827690099_3.76644002165554 chr2 163471950 163472836 + 3.76644002165554 NA promoter-TSS (NR_028122) promoter-TSS (NR_028122) -152 NR_028122 69517 Mm.395343 NR_028122 ENSMUSG00000053353 2310001K24Rik - RIKEN cDNA 2310001K24 gene ncRNA common_peak1_273_2284_0.164971417775785_11.2404641588333_3.76599580889681 chr19 53389536 53390740 + 3.76599580889681 NA intron (NM_172429, intron 1 of 5) CpG 435 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak2_71_631_-0.345870763931723_9.13084536621124_3.76585158596866 chr9 122293342 122295305 + 3.76585158596866 NA promoter-TSS (NM_001271873) promoter-TSS (NM_001271873) 100 NM_001271873 102566 Mm.87676 NM_133979 ENSMUSG00000037949 Ano10 AI604832|Tmem16k anoctamin 10 protein-coding common_peak2_55_481_-0.39971227502568_8.71303319871712_3.7657564588048 chr6 125424916 125426562 + 3.7657564588048 NA Intergenic MIRb|SINE|MIR -45235 NM_198604 213522 Mm.333396 NM_198604 ENSMUSG00000038167 Plekhg6 BC026778|Gm155 pleckstrin homology domain containing, family G (with RhoGef domain) member 6 protein-coding common_peak1_102_937_-0.281896228738637_9.73249599814606_3.76565991670493 chr17 28232694 28233747 + 3.76565991670493 NA intron (NM_011145, intron 1 of 7) intron (NM_011145, intron 1 of 7) 466 NM_011145 19015 Mm.328914 NM_011145 ENSMUSG00000002250 Ppard NUC-1|NUC1|Nr1c2|PPAR-beta|PPAR-delta|PPAR[b]|PPARdelta|Pparb|Pparb/d peroxisome proliferator activator receptor delta protein-coding common_peak1_24_210_-0.635083996570802_7.40355719042178_3.76442174557331-2 chr17 28486364 28486862 + 3.76442174557331 NA promoter-TSS (NM_010220) promoter-TSS (NM_010220) -464 NM_010220 14229 Mm.276405 NM_010220 ENSMUSG00000024222 Fkbp5 D17Ertd592e|Dit1|FKBP-5|FKBP51 FK506 binding protein 5 protein-coding common_peak1_24_210_-0.635083996570802_7.40355719042178_3.76442174557331 chr13 75839715 75840320 + 3.76442174557331 NA exon (NM_053108, exon 1 of 3) exon (NM_053108, exon 1 of 3) 131 NM_053108 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak1_24_210_-0.635083996570802_7.40355719042178_3.76442174557331-3 chr5 23887187 23887739 + 3.76442174557331 NA intron (NR_037304, intron 2 of 4) RLTR19|LTR|ERVK 35230 NR_028536 100217436 NR_028536 Snord93 Gm22397|MBII-336 small nucleolar RNA, C/D box 93 snoRNA common_peak2_24_210_-0.635083996570802_7.40355719042178_3.76442174557331 chr10 117974732 117976146 + 3.76442174557331 NA Intergenic Intergenic 49980 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_24_210_-0.635083996570802_7.40355719042178_3.76442174557331-2 chr11 87583225 87584547 + 3.76442174557331 NA intron (NM_001284394, intron 2 of 11) intron (NM_001284394, intron 2 of 11) 2825 NM_001284392 18952 Mm.2214 NM_011129 ENSMUSG00000020486 Sept4 ARTS|Bh5|OTTMUSG00000001265|Pnutl2 septin 4 protein-coding common_peak1_514_5142_0.111259032302602_12.3840239545038_3.76441180089338 chr9 118476451 118481377 + 3.76441180089338 NA exon (NM_001164789, exon 1 of 6) exon (NM_001164789, exon 1 of 6) 725 NM_010136 13813 Mm.200692 NM_010136 ENSMUSG00000032446 Eomes C77258|TBR-2|Tbr2 eomesodermin protein-coding common_peak1_225_2285_-0.176477878855719_11.0703707487866_3.76320678027689 chr11 30195093 30197335 + 3.76320678027689 NA intron (NM_175836, intron 1 of 34) intron (NM_175836, intron 1 of 34) 2043 NM_009260 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding unique_peak2_34_132_0.626163279022344_7.36836407501236_3.76216237638638 chr12 80938393 80939386 + 3.76216237638638 NA Intergenic Intergenic 6510 NR_045057 100504661 Mm.442322 NR_045057 Gm20337 - predicted gene, 20337 ncRNA common_peak1_61_307_0.426507975225761_8.48004052830778_3.76195350223429 chr1 127347936 127348956 + 3.76195350223429 NA intron (NM_145128, intron 4 of 17) intron (NM_145128, intron 4 of 17) 143460 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak2_113_715_0.287295253472275_9.62746340400039_3.76163245344491 chr17 46679950 46681893 + 3.76163245344491 NA promoter-TSS (NM_010787) promoter-TSS (NM_010787) 9 NM_001163729 71765 Mm.254784 NM_027910 ENSMUSG00000063576 Klhdc3 1300011D16Rik|Peas kelch domain containing 3 protein-coding common_peak1_21_63_0.859797742693951_6.42989887134698_3.76028804001394-2 chr18 82825664 82826170 + 3.76028804001394 NA Intergenic Intergenic -29980 NR_125720 73985 Mm.399211 NR_125720 ENSMUSG00000097738 4930445N18Rik 3010027C24Rik RIKEN cDNA 4930445N18 gene ncRNA common_peak1_21_63_0.859797742693951_6.42989887134698_3.76028804001394 chr13 95614120 95614625 + 3.76028804001394 NA intron (NM_010169, intron 1 of 1) intron (NM_010169, intron 1 of 1) 4061 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding common_peak1_21_63_0.859797742693951_6.42989887134698_3.76028804001394-4 chr6 113652682 113653097 + 3.76028804001394 NA intron (NM_001113553, intron 2 of 11) intron (NM_001113553, intron 2 of 11) 14422 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding common_peak1_21_63_0.859797742693951_6.42989887134698_3.76028804001394-3 chr2 165857302 165857778 + 3.76028804001394 NA intron (NM_001291158, intron 2 of 23) intron (NM_001291158, intron 2 of 23) 633 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak2_17_153_-0.762101178822234_6.88573595128378_3.75978692733746-2 chr14 69861559 69862257 + 3.75978692733746 NA intron (NM_028560, intron 3 of 6) intron (NM_028560, intron 3 of 6) 21501 NM_028526 73523 Mm.23509 NM_028526 ENSMUSG00000022085 Pebp4 PEBP-4 phosphatidylethanolamine binding protein 4 protein-coding unique_peak2_17_153_-0.762101178822234_6.88573595128378_3.75978692733746 chr1 138140237 138141473 + 3.75978692733746 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 34271 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_72_641_-0.344110460736674_9.15437425675396_3.75935313199598 chr1 132315857 132316915 + 3.75935313199598 NA exon (NM_028778, exon 1 of 7) exon (NM_028778, exon 1 of 7) 261 NM_001195025 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_26_226_-0.60434092045132_7.52437802706526_3.75881421250382 chr4 46554271 46554814 + 3.75881421250382 NA intron (NM_001164804, intron 2 of 11) intron (NM_001164804, intron 2 of 11) 11898 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding unique_peak2_26_226_-0.60434092045132_7.52437802706526_3.75881421250382 chr17 86127785 86129039 + 3.75881421250382 NA intron (NM_030133, intron 5 of 20) L1MC4|LINE|L1 16763 NM_030133 78586 Mm.146236 NM_030133 ENSMUSG00000024135 Srbd1 AI461933|C85414|D530025C17Rik S1 RNA binding domain 1 protein-coding common_peak2_208_1604_0.195388034515076_10.7460515992672_3.75811605909676 chr10 126978244 126980476 + 3.75811605909676 NA intron (NM_001113470, intron 1 of 7) CpG 643 NM_001113470 52468 Mm.29490 NM_146012 ENSMUSG00000078429 Ctdsp2 AI586070|D10Ertd73e|OS-4|OS4|SCP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein-coding common_peak1_24_78_0.782234443959281_6.69489797015674_3.75757211923619-2 chr4 141445507 141446037 + 3.75757211923619 NA intron (NM_009541, intron 1 of 15) intron (NM_009541, intron 1 of 15) 1099 NM_009541 22642 Mm.389590 NM_009541 ENSMUSG00000006215 Zbtb17 AA589413|Lp-1|Miz1|Zfp100|mZ13 zinc finger and BTB domain containing 17 protein-coding common_peak2_24_78_0.782234443959281_6.69489797015674_3.75757211923619-2 chr8 115233659 115234273 + 3.75757211923619 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 472928 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_24_78_0.782234443959281_6.69489797015674_3.75757211923619 chr1 37585773 37586396 + 3.75757211923619 NA Intergenic Intergenic -45068 NM_173870 269181 Mm.25861 NM_173870 ENSMUSG00000026110 Mgat4a 9530018I07Rik|GnT-IVa|glcNAc-T-IVa mannoside acetylglucosaminyltransferase 4, isoenzyme A protein-coding common_peak1_24_78_0.782234443959281_6.69489797015674_3.75757211923619 chr11 72964331 72964924 + 3.75757211923619 NA intron (NM_016745, intron 1 of 21) intron (NM_016745, intron 1 of 21) 3458 NM_001163337 53313 Mm.6306 NM_016745 ENSMUSG00000020788 Atp2a3 SERCA3b|Serca3 ATPase, Ca++ transporting, ubiquitous protein-coding common_peak2_56_490_-0.395080494764519_8.74203896693243_3.75607303006618 chr12 69168237 69169005 + 3.75607303006618 NA promoter-TSS (NM_001081406) promoter-TSS (NM_001081406) -193 NM_001081406 69706 Mm.28847 NM_027178 ENSMUSG00000034883 Lrr1 2410005L11Rik|AU021780|LRR-1|Ppil5 leucine rich repeat protein 1 protein-coding common_peak2_50_232_0.483484632473177_8.10592846089087_3.75603468583345 chr13 100616121 100617335 + 3.75603468583345 NA TTS (NM_001283011) TTS (NM_001283011) 216 NM_178410 218518 Mm.25300 NM_178410 ENSMUSG00000021636 Marveld2 BC003296|MARVD2|Mrvldc2|Tric|Trica|Tricb|Tricc MARVEL (membrane-associating) domain containing 2 protein-coding common_peak2_50_232_0.483484632473177_8.10592846089087_3.75603468583345-2 chr3 96634982 96636146 + 3.75603468583345 NA promoter-TSS (NM_001162388) promoter-TSS (NM_001162388) 134 NM_001162387 18632 Mm.20901 NM_011069 ENSMUSG00000028102 Pex11b PEX11beta|Pex11pbeta peroxisomal biogenesis factor 11 beta protein-coding common_peak2_146_1007_0.243730829564052_10.0991453382819_3.75517983092164 chr7 16272392 16274572 + 3.75517983092164 NA TTS (NM_001136471) TTS (NM_001136471) 210 NM_001136270 66300 Mm.218698 NM_001136270 ENSMUSG00000091811 Inafm1 2610014I16Rik|Prr24 InaF motif containing 1 protein-coding common_peak1_62_314_0.422401141564503_8.51040858916953_3.75479925277076 chr15 64278620 64279656 + 3.75479925277076 NA intron (NM_001276462, intron 1 of 27) intron (NM_001276462, intron 1 of 27) 33535 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_72_387_0.382406184198501_8.79111593428638_3.7547683193846-2 chr4 45451610 45453781 + 3.7547683193846 NA intron (NM_001033306, intron 3 of 5) intron (NM_001033306, intron 3 of 5) -43929 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak2_72_387_0.382406184198501_8.79111593428638_3.7547683193846 chr4 41740401 41741576 + 3.7547683193846 NA intron (NM_001286538, intron 1 of 3) CpG-9828 371 NM_001286540 18391 Mm.425181 NM_011014 ENSMUSG00000036078 Sigmar1 Oprs1|Sig1R|sigma1R sigma non-opioid intracellular receptor 1 protein-coding common_peak1_197_1494_0.202137005915054_10.646998272043_3.75472339345295 chr14 70174364 70176758 + 3.75472339345295 NA intron (NM_145978, intron 1 of 9) intron (NM_145978, intron 1 of 9) 1254 NM_001253736 213019 Mm.283968 NM_145978 ENSMUSG00000022090 Pdlim2 4732462F18Rik|Slim PDZ and LIM domain 2 protein-coding common_peak2_98_590_0.314440143636633_9.36423439199585_3.75361663469191 chr15 38661169 38662946 + 3.75361663469191 NA 5' UTR (NM_025494, exon 1 of 13) 5' UTR (NM_025494, exon 1 of 13) 153 NM_025494 66335 Mm.276618 NM_025494 ENSMUSG00000022295 Atp6v1c1 1700025B18Rik|U13839 ATPase, H+ transporting, lysosomal V1 subunit C1 protein-coding common_peak1_96_876_-0.291094669081323_9.63088569790407_3.7529138542354 chr5 130254355 130255717 + 3.7529138542354 NA promoter-TSS (NM_178897) promoter-TSS (NM_178897) 426 NM_023248 66711 Mm.280484 NM_023248 ENSMUSG00000025337 Sbds 4733401P19Rik|AI836084|CGI-97|SDS Shwachman-Bodian-Diamond syndrome homolog (human) protein-coding common_peak2_46_206_0.509644129926692_7.94830902246267_3.75249927343231 chr9 70237498 70238542 + 3.75249927343231 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 30670 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak2_139_1321_-0.233836124611447_10.251588399202_3.75150413001067 chr13 52806626 52809253 + 3.75150413001067 NA Intergenic Intergenic -50734 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA unique_peak2_11_105_-0.940757297657459_6.25754180573447_3.75145640147994 chr1 155173776 155174495 + 3.75145640147994 NA exon (NM_021433, exon 2 of 8) exon (NM_021433, exon 2 of 8) 15432 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding unique_peak2_11_105_-0.940757297657459_6.25754180573447_3.75145640147994-2 chr12 32284980 32285682 + 3.75145640147994 NA Intergenic Intergenic -76682 NM_001146200 30955 Mm.101369 NM_020272 ENSMUSG00000020573 Pik3cg 5830428L06Rik|PI3Kgamma|p110gamma phosphoinositide-3-kinase, catalytic, gamma polypeptide protein-coding unique_peak2_11_105_-0.940757297657459_6.25754180573447_3.75145640147994-3 chr6 140281792 140282531 + 3.75145640147994 NA Intergenic Intergenic -141938 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak2_127_836_0.267006384133893_9.84258700461729_3.75124398213921 chr1 40380449 40383839 + 3.75124398213921 NA Intergenic Intergenic -47426 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_37_320_-0.499452972539056_8.07670300085277_3.75123276468402 chr13 67723801 67724302 + 3.75123276468402 NA intron (NM_145622, intron 1 of 3) intron (NM_145622, intron 1 of 3) 5122 NM_145622 235907 Mm.440123 NM_145622 ENSMUSG00000071281 Zfp65 KRAB5|Zfp71-rs1|pz114 zinc finger protein 65 protein-coding common_peak1_196_1950_-0.190891445983727_10.8345523396172_3.75040516532293 chr13 108301999 108305130 + 3.75040516532293 NA Intergenic Intergenic -12773 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak1_47_408_-0.435569253663298_8.4581724061101_3.75034264027727 chr16 38396298 38397164 + 3.75034264027727 NA intron (NM_134102, intron 10 of 10) intron (NM_134102, intron 10 of 10) 34541 NM_022318 64082 Mm.390856 NM_022318 ENSMUSG00000022803 Popdc2 AV006127|Pop2 popeye domain containing 2 protein-coding common_peak1_40_346_-0.477348587512835_8.20011755882184_3.75025041638474 chr15 102073031 102073699 + 3.75025041638474 NA promoter-TSS (NM_145625) promoter-TSS (NM_145625) -408 NM_145625 75705 Mm.290022 NM_145625 ENSMUSG00000058655 Eif4b 2310046H11Rik|AL024095|C85189|Eif4a2 eukaryotic translation initiation factor 4B protein-coding common_peak1_43_373_-0.46048440600733_8.31665225688397_3.74949742112661 chr6 148895631 148896634 + 3.74949742112661 NA 5' UTR (NM_181541, exon 1 of 19) 5' UTR (NM_181541, exon 1 of 19) 105 NM_001301351 232560 Mm.150568 NM_181541 ENSMUSG00000030309 Caprin2 C1qdc1|Eeg1|rng140 caprin family member 2 protein-coding common_peak1_56_272_0.451741578630321_8.31862793023501_3.74949742112661 chrX 56597394 56598227 + 3.74949742112661 NA exon (NM_146234, exon 1 of 4) exon (NM_146234, exon 1 of 4) 109 NM_146234 236792 Mm.291824 NM_146234 ENSMUSG00000061273 Mmgt1 9630048L06Rik|BC032271|Emc5|Mir5116|Tmem32|mir-5116 membrane magnesium transporter 1 protein-coding common_peak1_26_88_0.746474135873197_6.848970498903_3.74901010627654 chr12 82250651 82251144 + 3.74901010627654 NA intron (NM_001167983, intron 2 of 23) ORR1D2|LTR|ERVL-MaLR -60452 NM_172579 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak2_26_88_0.746474135873197_6.848970498903_3.74901010627654 chr15 78930986 78931728 + 3.74901010627654 NA TTS (NM_008495) TTS (NM_008495) -3576 NM_133800 97961 Mm.157216 NM_133800 ENSMUSG00000033099 Nol12 C78541|Nop25 nucleolar protein 12 protein-coding common_peak2_74_402_0.375513679761699_8.84239286840882_3.74792981878296 chr18 34650801 34651920 + 3.74792981878296 NA intron (NM_178347, intron 2 of 15) CpG 376 NM_178347 52563 Mm.196638 NM_178347 ENSMUSG00000024370 Cdc23 6030435O18|D18Ertd243e CDC23 cell division cycle 23 protein-coding common_peak1_96_574_0.317920217531672_9.32637825459757_3.7476364821649 chr17 86300262 86301737 + 3.7476364821649 NA intron (NM_011104, intron 1 of 14) intron (NM_011104, intron 1 of 14) -13821 NR_045435 72104 Mm.443401 NR_045435 ENSMUSG00000100738 2010106C02Rik - RIKEN cDNA 2010106C02 gene ncRNA common_peak1_93_846_-0.296474760719823_9.57798077897229_3.74739576698108 chr9 123020568 123021765 + 3.74739576698108 NA promoter-TSS (NM_025339) promoter-TSS (NM_025339) -160 NM_025339 66079 Mm.482265 NM_025339 ENSMUSG00000066233 Tmem42 0610027O18Rik|4933429E06Rik|AV003444|D9Ertd662e transmembrane protein 42 protein-coding common_peak2_93_846_-0.296474760719823_9.57798077897229_3.74739576698108 chrX 7573418 7575377 + 3.74739576698108 NA promoter-TSS (NM_138605) promoter-TSS (NM_138605) -116 NM_138605 54646 Mm.148163 NM_138605 ENSMUSG00000039556 Ppp1r3f DXImx48e|R3F|RF3|Sfc15 protein phosphatase 1, regulatory (inhibitor) subunit 3F protein-coding common_peak2_57_499_-0.390508658963162_8.77052995518051_3.74726268630176 chr17 36430369 36432547 + 3.74726268630176 NA Intergenic Intergenic 30871 NM_177634 224753 Mm.246581 NM_177634 ENSMUSG00000048231 H2-M10.4 15H histocompatibility 2, M region locus 10.4 protein-coding common_peak2_57_499_-0.390508658963162_8.77052995518051_3.74726268630176-2 chr6 108875238 108877143 + 3.74726268630176 NA Intergenic Intergenic 47549 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding unique_peak1_17_45_0.981123405815654_6.01412365896484_3.7471476887258-2 chr2 165880510 165880991 + 3.7471476887258 NA intron (NM_001252584, intron 1 of 22) intron (NM_001252584, intron 1 of 22) 1528 NM_001281926 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak1_17_45_0.981123405815654_6.01412365896484_3.7471476887258 chr17 47773497 47773839 + 3.7471476887258 NA intron (NM_001161723, intron 1 of 8) intron (NM_001161723, intron 1 of 8) -12076 NM_011549 21425 Mm.2305 NM_011549 ENSMUSG00000023990 Tfeb Tcfeb|bHLHe35 transcription factor EB protein-coding common_peak1_17_45_0.981123405815654_6.01412365896484_3.7471476887258 chr2 3763401 3763791 + 3.7471476887258 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 50138 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_17_45_0.981123405815654_6.01412365896484_3.7471476887258-2 chr2 103653074 103653469 + 3.7471476887258 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 86961 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak1_28_243_-0.582074023050319_7.63970032603773_3.74654260513461 chr10 22300590 22301150 + 3.74654260513461 NA intron (NM_009018, intron 5 of 5) MTC-int|LTR|ERVL-MaLR -5850 NR_015465 606736 Mm.387042 NR_015465 ENSMUSG00000097352 C920009B18Rik - RIKEN cDNA C920009B18 gene ncRNA unique_peak2_28_243_-0.582074023050319_7.63970032603773_3.74654260513461 chr19 11458206 11459877 + 3.74654260513461 NA intron (NM_021718, intron 4 of 6) intron (NM_021718, intron 4 of 6) -10327 NM_001166376 73656 Mm.440719 NM_028595 ENSMUSG00000079419 Ms4a6c 2200009H22Rik|2210417N07Rik membrane-spanning 4-domains, subfamily A, member 6C protein-coding common_peak1_30_260_-0.561223791835578_7.7472941006521_3.74508876320183 chr6 124903717 124904336 + 3.74508876320183 NA TTS (NM_008479) TTS (NM_008479) 7679 NM_008479 16768 Mm.4528 NM_008479 ENSMUSG00000030124 Lag3 CD223|LAG-3|Ly66 lymphocyte-activation gene 3 protein-coding common_peak2_79_708_-0.325282967236028_9.3070003336215_3.74503969734615 chr3 105762379 105764913 + 3.74503969734615 NA intron (NM_145541, intron 1 of 7) L2|LINE|L2 37735 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein-1a protein-coding common_peak2_154_1483_-0.220487585008176_10.4250315841167_3.74474213388113 chr19 40894230 40895701 + 3.74474213388113 NA TTS (NR_106167) TTS (NR_106167) 260 NM_028319 72672 Mm.313523 NM_028319 ENSMUSG00000049164 Zfp518a 2810401C22Rik|6330417C12Rik|AI426493|Zfp518|Znf518|Znf518a|mKIAA0335 zinc finger protein 518A protein-coding common_peak2_132_1247_-0.241501906199888_10.1646512657623_3.74473598280059 chr13 98691005 98694252 + 3.74473598280059 NA exon (NM_001025606, exon 2 of 4) exon (NM_001025606, exon 2 of 4) 2203 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak2_64_565_-0.367743722498986_8.96078638158239_3.74379538633884 chr7 19148570 19150340 + 3.74379538633884 NA promoter-TSS (NM_026111) promoter-TSS (NM_026111) -259 NM_026111 67369 Mm.234876 NM_026111 ENSMUSG00000030407 Qpctl 1810019P04Rik|BB101812|gQC glutaminyl-peptide cyclotransferase-like protein-coding common_peak2_89_806_-0.303633914526793_9.50460790601439_3.74354531877207 chr14 75786279 75787774 + 3.74354531877207 NA promoter-TSS (NM_026232) promoter-TSS (NM_026232) 11 NM_026232 67554 Mm.46067 NM_026232 ENSMUSG00000022003 Slc25a30 4933433D23Rik|AV025504|AV221431|AW319655|KMCP1 solute carrier family 25, member 30 protein-coding common_peak2_76_417_0.369362408692183_8.89204033642697_3.74337662211458-2 chr8 9976903 9978490 + 3.74337662211458 NA promoter-TSS (NM_026868) promoter-TSS (NM_026868) -21 NM_001081119 68904 Mm.142570 NM_026868 ENSMUSG00000040396 Abhd13 1110065L07Rik|AI463703|AI788994 abhydrolase domain containing 13 protein-coding common_peak2_76_417_0.369362408692183_8.89204033642697_3.74337662211458 chr6 51532862 51534473 + 3.74337662211458 NA intron (NM_001127349, intron 1 of 6) B1F|SINE|Alu 9764 NM_001127349 71982 Mm.294166 NM_028035 ENSMUSG00000038301 Snx10 2410004M09Rik sorting nexin 10 protein-coding common_peak1_87_786_-0.307197460440824_9.46662109528707_3.74330449730231-2 chr7 44816048 44816975 + 3.74330449730231 NA promoter-TSS (NM_030693) promoter-TSS (NM_030693) 141 NM_001171024 100328588 Mm.2565 NM_001171024 ENSMUSG00000074141 Gm21948 Nup62-il4i1 predicted gene, 21948 protein-coding common_peak1_87_786_-0.307197460440824_9.46662109528707_3.74330449730231 chr19 5572105 5573121 + 3.74330449730231 NA Intergenic RMER15|LTR|ERVL 4539 NM_001033448 381201 Mm.441906 NM_001033448 ENSMUSG00000049562 Ap5b1 Gm962 adaptor-related protein complex 5, beta 1 subunit protein-coding common_peak2_88_796_-0.305417545226284_9.48572714137733_3.74327525343513 chr1 92468264 92470609 + 3.74327525343513 NA intron (NM_024197, intron 3 of 9) intron (NM_024197, intron 3 of 9) 4322 NM_024197 67273 Mm.248778 NM_024197 ENSMUSG00000026260 Ndufa10 2900053E13Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 protein-coding common_peak1_159_1127_0.231419808791051_10.2552612567943_3.7430391504752 chr8 124266045 124268194 + 3.7430391504752 NA intron (NM_139272, intron 1 of 15) RMER15|LTR|ERVL 35725 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_209_2099_-0.18398107069031_10.9441830772083_3.74094569231 chr8 124862104 124864626 + 3.74094569231 NA promoter-TSS (NM_025615) promoter-TSS (NM_025615) 332 NM_010322 14712 Mm.29114 NM_010322 ENSMUSG00000031985 Gnpat AU019525|D1Ertd819e|DHAPAT glyceronephosphate O-acyltransferase protein-coding unique_peak2_35_302_-0.511876310413928_7.98723582826599_3.74070389333324 chr6 130231888 130233800 + 3.74070389333324 NA intron (NM_001110323, intron 1 of 7) RSINE1|SINE|B4 478 NM_001110323 16638 Mm.441781 NM_014194 ENSMUSG00000067599 Klra7 LGL-1|Ly-49G.1|Ly-49G.2|Ly-49G.3|Ly49G.4|Ly49g|Ly49g1|Ly49g2 killer cell lectin-like receptor, subfamily A, member 7 protein-coding common_peak1_35_302_-0.511876310413928_7.98723582826599_3.74070389333324 chr6 130135671 130136539 + 3.74070389333324 NA intron (NM_013793, intron 3 of 7) B1_Mur1|SINE|Alu -6207 NM_001101620 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding common_peak2_93_550_0.323834890041217_9.26782595359177_3.74068684836895 chr9 108104290 108106018 + 3.74068684836895 NA exon (NM_007567, exon 7 of 12) exon (NM_007567, exon 7 of 12) -10674 NM_146226 235606 Mm.219639 NM_146226 ENSMUSG00000032590 Apeh - acylpeptide hydrolase protein-coding common_peak1_84_757_-0.314412190318601_9.40884794301179_3.74025479223655 chr12 76306801 76308145 + 3.74025479223655 NA intron (NM_138745, intron 22 of 27) B1_Mur1|SINE|Alu -17418 NM_001101471 238276 Mm.311452 NM_001101471 ENSMUSG00000021057 Akap5 3526401B18Rik|AKAP 150|AKAP-5|AKAP150|BB098886|Gm258|P150 A kinase (PRKA) anchor protein 5 protein-coding common_peak2_37_150_0.588571775258168_7.53269062695416_3.74020777459197 chr10 61199563 61200742 + 3.74020777459197 NA intron (NM_001081127, intron 21 of 21) intron (NM_001081127, intron 21 of 21) 24890 NM_023064 65971 Mm.30227 NM_023064 ENSMUSG00000020096 Tbata 1700021K02Rik|AI428928|Spatial|Titest thymus, brain and testes associated protein-coding common_peak1_23_201_-0.6444360146597_7.33599347542194_3.73980857519636-2 chr14 66230671 66231242 + 3.73980857519636 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -17404 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_23_201_-0.6444360146597_7.33599347542194_3.73980857519636 chr1 21325794 21326317 + 3.73980857519636 NA Intergenic Intergenic -23622 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding unique_peak2_23_201_-0.6444360146597_7.33599347542194_3.73980857519636 chr2 164899900 164900948 + 3.73980857519636 NA intron (NM_199027, intron 11 of 27) intron (NM_199027, intron 11 of 27) 11326 NM_199027 329559 Mm.330776 NM_199027 ENSMUSG00000039834 Zfp335 1810045J01Rik|NIF-1|Nif1|Znf335 zinc finger protein 335 protein-coding common_peak1_23_201_-0.6444360146597_7.33599347542194_3.73980857519636-3 chr2 94158216 94158727 + 3.73980857519636 NA promoter-TSS (NM_019657) promoter-TSS (NM_019657) -562 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding common_peak1_23_201_-0.6444360146597_7.33599347542194_3.73980857519636-4 chr8 18845751 18846208 + 3.73980857519636 NA promoter-TSS (NM_026792) promoter-TSS (NM_026792) -300 NM_026792 52123 Mm.24117 NM_026792 ENSMUSG00000031467 Agpat5 1110013A05Rik|D8Ertd319e 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) protein-coding common_peak1_23_201_-0.6444360146597_7.33599347542194_3.73980857519636-5 chr9 33060830 33061286 + 3.73980857519636 NA Intergenic Intergenic -132092 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak1_40_168_0.560563828783241_7.68116135067381_3.73940002027051 chr17 56040317 56041059 + 3.73940002027051 NA intron (NM_013733, intron 1 of 13) intron (NM_013733, intron 1 of 13) 272 NM_013733 27221 Mm.391010 NM_013733 ENSMUSG00000002835 Chaf1a AL023013|AL024058|CAF-1|Cac1p chromatin assembly factor 1, subunit A (p150) protein-coding common_peak2_77_425_0.36484614056838_8.91713269051003_3.73833414709277 chr1 194984106 194986552 + 3.73833414709277 NA Intergenic Intergenic -8370 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA common_peak1_153_1472_-0.221207863076426_10.4139377834976_3.73806534315862 chr2 24975153 24975970 + 3.73806534315862 NA promoter-TSS (NM_001031808) promoter-TSS (NM_001031808) -463 NM_001031808 107733 Mm.23010 NM_001031808 ENSMUSG00000036850 Mrpl41 MRP-L27|Rpml27 mitochondrial ribosomal protein L41 protein-coding common_peak2_44_381_-0.451250190471116_8.35180373280019_3.7378181220028 chr1 40393431 40394876 + 3.7378181220028 NA Intergenic B3|SINE|B2 -35417 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak2_66_583_-0.359280858730294_9.01018412951487_3.73726545245597 chr1 85678587 85681248 + 3.73726545245597 NA intron (NM_001313713, intron 10 of 15) B4|SINE|B4 29929 NM_001313714 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding common_peak2_51_239_0.475142960218769_8.1444620757179_3.73703736547832 chr12 13248583 13249768 + 3.73703736547832 NA promoter-TSS (NM_134040) promoter-TSS (NM_134040) -1 NM_134040 104721 Mm.251255 NM_134040 ENSMUSG00000037149 Ddx1 AA409185|DBP-RB DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein-coding common_peak2_79_440_0.359724004445967_8.96449684778051_3.73691473588513 chr7 144552985 144554394 + 3.73691473588513 NA promoter-TSS (NM_001195086) promoter-TSS (NM_001195086) 40 NM_001033319 233977 Mm.490347 NM_001033319 ENSMUSG00000037519 Ppfia1 C030014K08Rik|C87158|LIP.1|LIP1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 protein-coding common_peak1_89_518_0.333200220393106_9.18619083855443_3.73568697456357 chr9 55511280 55512206 + 3.73568697456357 NA intron (NM_145615, intron 1 of 11) CpG 500 NM_145615 110842 Mm.290853 NM_145615 ENSMUSG00000032314 Etfa 2010200I21Rik|D9Ertd394e electron transferring flavoprotein, alpha polypeptide protein-coding common_peak2_89_518_0.333200220393106_9.18619083855443_3.73568697456357 chr13 43364886 43366771 + 3.73568697456357 NA Intergenic Intergenic -4888 NM_178848 68346 Mm.35325 NM_178848 ENSMUSG00000054021 Sirt5 0610012J09Rik|1500032M05Rik|AV001953 sirtuin 5 protein-coding common_peak2_107_665_0.296053822141046_9.52740527814179_3.73478311996449 chr5 134582615 134583876 + 3.73478311996449 NA intron (NM_020022, intron 1 of 10) ID_B1|SINE|B4 555 NM_020022 19718 Mm.332739 NM_020022 ENSMUSG00000023104 Rfc2 2610008M13Rik|40kDa|AI326953|Recc2 replication factor C (activator 1) 2 protein-coding common_peak2_82_463_0.351524874040775_9.03374343214796_3.73477972887894 chr1 132416829 132418323 + 3.73477972887894 NA 5' UTR (NM_172516, exon 1 of 13) 5' UTR (NM_172516, exon 1 of 13) 123 NM_172516 213452 Mm.257120 NM_172516 ENSMUSG00000042046 Dstyk A930019K20Rik|C430014H23Rik|C820013G01|Ripk5 dual serine/threonine and tyrosine protein kinase protein-coding unique_peak2_7_75_-1.17828656150477_5.6587842326912_3.73368918132413 chr17 36145173 36145749 + 3.73368918132413 NA intron (NR_033517, intron 1 of 3) CpG 443 NR_033517 675325 Mm.75890 NR_033517 ENSMUSG00000038311 2410017I17Rik - RIKEN cDNA 2410017I17 gene ncRNA unique_peak2_7_75_-1.17828656150477_5.6587842326912_3.73368918132413-2 chr18 47309991 47310720 + 3.73368918132413 NA intron (NM_018744, intron 1 of 18) intron (NM_018744, intron 1 of 18) 58513 NM_018744 20358 Mm.40909 NM_018744 ENSMUSG00000019647 Sema6a A730020P05Rik|AI851735|Sema6A-1|Semaq|VIa sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A protein-coding common_peak1_131_872_0.26070672640415_9.90019120683151_3.73345832322337 chr6 13069273 13070665 + 3.73345832322337 NA intron (NM_027992, intron 1 of 8) CpG 210 NM_027992 71900 Mm.27742 NM_027992 ENSMUSG00000029571 Tmem106b 2310036D22Rik|5830455K21Rik|6430519M21Rik|AI428776|AI661344 transmembrane protein 106B protein-coding common_peak2_83_471_0.34805621680937_9.05667115776653_3.7327803763709 chr3 21960653 21963390 + 3.7327803763709 NA Intergenic Intergenic -114631 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_258_2124_0.170072634564455_11.1382834431947_3.7316490263856 chrX 51016592 51020146 + 3.7316490263856 NA promoter-TSS (NM_172413) promoter-TSS (NM_172413) -351 NM_172413 72065 Mm.43152 NM_172413 ENSMUSG00000050029 Rap2c 2010200P20Rik|AI194294|AL022976 RAP2C, member of RAS oncogene family protein-coding common_peak2_52_245_0.473227260103872_8.17912813539118_3.73153837390818 chr8 120696620 120697759 + 3.73153837390818 NA Intergenic Intergenic 28869 NM_001293559 12857 Mm.386758 NM_009941 ENSMUSG00000031818 Cox4i1 AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1 cytochrome c oxidase subunit IV isoform 1 protein-coding common_peak1_52_245_0.473227260103872_8.17912813539118_3.73153837390818-2 chr19 11540290 11541225 + 3.73153837390818 NA intron (NM_025658, intron 1 of 6) L1M2a|LINE|L1 3908 NM_025658 66607 Mm.441056 NM_025658 ENSMUSG00000024678 Ms4a4d 2210417J23Rik membrane-spanning 4-domains, subfamily A, member 4D protein-coding common_peak1_52_245_0.473227260103872_8.17912813539118_3.73153837390818 chr15 51877034 51877857 + 3.73153837390818 NA promoter-TSS (NM_030132) promoter-TSS (NM_030132) 4 NM_030132 78581 Mm.176347 NM_030132 ENSMUSG00000022313 Utp23 1700010I21Rik|AI662478|BB238373|D530033C11Rik UTP23 small subunit processome component protein-coding common_peak2_53_462_-0.406048505234285_8.65184413064309_3.7311104295888 chr5 105876317 105877774 + 3.7311104295888 NA intron (NR_030777, intron 1 of 9) CpG 477 NM_018759 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_53_462_-0.406048505234285_8.65184413064309_3.7311104295888 chr1 21383279 21384181 + 3.7311104295888 NA 5' UTR (NM_001113187, exon 1 of 3) 5' UTR (NM_001113187, exon 1 of 3) 174 NM_001113187 98582 Mm.326336 NM_001113187 ENSMUSG00000085079 Khdc1b AU014713|AU015226|AU024076|AY238603|C85331|C86372|C88118|Khdc1|Khdc1c KH domain containing 1B protein-coding common_peak1_28_99_0.704807124737844_6.99625975214365_3.73041431685634 chr2 158794875 158795361 + 3.73041431685634 NA intron (NM_145742, intron 1 of 20) intron (NM_145742, intron 1 of 20) 311 NM_001291144 71715 Mm.315652 NM_145742 ENSMUSG00000027655 Dhx35 1200009D07Rik|Ddx35 DEAH (Asp-Glu-Ala-His) box polypeptide 35 protein-coding common_peak1_234_1871_0.180871954720931_10.9608006969439_3.72940892608161 chr11 58008872 58010869 + 3.72940892608161 NA intron (NM_028451, intron 1 of 18) CpG 806 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding unique_peak2_20_177_-0.6982587871679_7.12660403738245_3.72899790201527-2 chr19 10747333 10748516 + 3.72899790201527 NA intron (NR_027805, intron 1 of 3) intron (NR_027805, intron 1 of 3) 6977 NR_027805 403202 Mm.34482 NM_207529 ENSMUSG00000067577 A430093F15Rik Gm674 RIKEN cDNA A430093F15 gene ncRNA common_peak1_30_110_0.6722663383842_7.13054903554221_3.72899790201527 chr2 102849995 102850455 + 3.72899790201527 NA intron (NM_009851, intron 5 of 18) intron (NM_009851, intron 5 of 18) 51440 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_20_177_-0.6982587871679_7.12660403738245_3.72899790201527 chr12 75635842 75636224 + 3.72899790201527 NA intron (NM_028203, intron 1 of 1) intron (NM_028203, intron 1 of 1) -4284 NR_038063 665931 Mm.341719 NR_038063 Rplp2-ps1 Gm7852 ribosomal protein, large P2, pseudogene 1 pseudo unique_peak2_20_177_-0.6982587871679_7.12660403738245_3.72899790201527 chr14 101879188 101879946 + 3.72899790201527 NA intron (NM_201529, intron 6 of 30) intron (NM_201529, intron 6 of 30) 149639 NM_201529 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding common_peak1_130_863_0.262199759683405_9.88598738200517_3.72810703213947 chr15 84191660 84192899 + 3.72810703213947 NA promoter-TSS (NM_178614) promoter-TSS (NM_178614) 46 NM_178614 68653 Mm.290725 NM_178614 ENSMUSG00000022437 Samm50 1110030L07Rik SAMM50 sorting and assembly machinery component protein-coding unique_peak2_12_113_-0.904081080710164_6.38084947380966_3.72766408930755 chr15 5413992 5414790 + 3.72766408930755 NA Intergenic MER5A1|DNA|hAT-Charlie -81927 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_12_113_-0.904081080710164_6.38084947380966_3.72766408930755 chr13 30620631 30621007 + 3.72766408930755 NA intron (NR_045975, intron 2 of 3) L1MB7|LINE|L1 5776 NR_045975 75090 Mm.292232 NR_045975 ENSMUSG00000086263 4930519D14Rik - RIKEN cDNA 4930519D14 gene ncRNA unique_peak2_12_113_-0.904081080710164_6.38084947380966_3.72766408930755-2 chr19 29390768 29391547 + 3.72766408930755 NA Intergenic Intergenic -19762 NM_021396 58205 Mm.116737 NM_021396 ENSMUSG00000016498 Pdcd1lg2 B7-DC|Btdc|F730015O22Rik|PD-L2 programmed cell death 1 ligand 2 protein-coding common_peak2_200_1995_-0.188217789034255_10.8687871108201_3.72545768133493 chr14 20694184 20696928 + 3.72545768133493 NA TTS (NM_001168273) TTS (NM_001168273) 588 NM_028428 73068 Mm.277552 NM_028428 ENSMUSG00000039357 Fut11 3110009G03Rik|AI317183 fucosyltransferase 11 protein-coding unique_peak2_15_137_-0.812271193653001_6.70238885995167_3.7247567228554 chr5 36989068 36989739 + 3.7247567228554 NA promoter-TSS (NM_011716) promoter-TSS (NM_011716) -421 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin Wolfram syndrome 1 homolog (human) protein-coding common_peak1_59_518_-0.384321984573821_8.82742973607097_3.72453037747843 chr16 19980980 19982104 + 3.72453037747843 NA intron (NM_183390, intron 1 of 6) intron (NM_183390, intron 1 of 6) 1507 NM_183390 239743 Mm.86699 NM_183390 ENSMUSG00000043008 Klhl6 - kelch-like 6 protein-coding common_peak2_112_1037_-0.264071230185481_9.88755511326514_3.72449146888357 chr10 62194007 62197123 + 3.72449146888357 NA intron (NM_197996, intron 3 of 7) intron (NM_197996, intron 3 of 7) -1338 NR_106122 102465767 NR_106122 ENSMUSG00000099185 Mir7662 Gm27876|mmu-mir-7662 microRNA 7662 ncRNA unique_peak2_35_138_0.612356600335516_7.42511937289127_3.72422939572681 chr6 142388389 142389656 + 3.72422939572681 NA intron (NM_025872, intron 1 of 4) intron (NM_025872, intron 1 of 4) 1779 NM_025872 66964 Mm.3676 NM_025872 ENSMUSG00000030245 Golt1b 2310061A22Rik|AA407874|AU024291|CGI-141 golgi transport 1B protein-coding common_peak1_35_138_0.612356600335516_7.42511937289127_3.72422939572681 chr15 99644898 99645594 + 3.72422939572681 NA intron (NM_012025, intron 1 of 17) intron (NM_012025, intron 1 of 17) 6410 NM_001253808 26934 Mm.273804 NM_012025 ENSMUSG00000023015 Racgap1 AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478 Rac GTPase-activating protein 1 protein-coding unique_peak1_11_21_1.32773153826844_5.12329738777152_3.72402976438215 chr13 9276619 9277029 + 3.72402976438215 NA 5' UTR (NM_001081426, exon 1 of 37) 5' UTR (NM_001081426, exon 1 of 37) 299 NM_001081426 208440 Mm.217326 NM_172459 ENSMUSG00000048264 Dip2c 2900024P20Rik|9630044M06|mKIAA0934 disco interacting protein 2 homolog C protein-coding unique_peak1_11_21_1.32773153826844_5.12329738777152_3.72402976438215-2 chr8 120777143 120777514 + 3.72402976438215 NA Intergenic Intergenic 38689 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_104_640_0.301399684058078_9.47488038864778_3.72397568925535 chr2 11705084 11706572 + 3.72397568925535 NA 5' UTR (NM_008358, exon 1 of 7) 5' UTR (NM_008358, exon 1 of 7) 116 NM_001271500 16169 Mm.200196 NM_008358 ENSMUSG00000023206 Il15ra AA690181|IL-15RA interleukin 15 receptor, alpha chain protein-coding common_peak2_160_1547_-0.214192842785431_10.4890933347517_3.72371235107289 chr1 151427645 151429777 + 3.72371235107289 NA promoter-TSS (NM_026876) promoter-TSS (NM_026876) 63 NM_026876 98685 Mm.289373 NM_026876 ENSMUSG00000053286 Trmt1l 1190005F20Rik|AW226554|C1orf25|Trm1-like|Trm1l tRNA methyltransferase 1 like protein-coding common_peak1_170_1232_0.220676151300619_10.3782951600531_3.72351283745099 chr7 28440175 28442167 + 3.72351283745099 NA intron (NM_001039192, intron 1 of 6) intron (NM_001039192, intron 1 of 6) 234 NM_001039192 63986 Mm.194536 NM_022024 ENSMUSG00000060791 Gmfg 0610039G16Rik|2310057N07Rik|AI324845 glia maturation factor, gamma protein-coding common_peak1_44_193_0.526265795377504_7.86304573987588_3.72269794560775 chr13 49340744 49341475 + 3.72269794560775 NA promoter-TSS (NM_001039180) promoter-TSS (NM_001039180) -440 NM_001039179 76895 Mm.197387 NM_029791 ENSMUSG00000037933 Bicd2 - bicaudal D homolog 2 (Drosophila) protein-coding unique_peak2_33_285_-0.529722764617862_7.89500995446946_3.72254652259521 chr9 50686030 50687796 + 3.72254652259521 NA intron (NM_001311069, intron 10 of 19) intron (NM_001311069, intron 10 of 19) -27133 NM_145614 235339 Mm.285076 NM_145614 ENSMUSG00000000168 Dlat 6332404G05Rik|DLTA|PDC-E2 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) protein-coding common_peak1_33_285_-0.529722764617862_7.89500995446946_3.72254652259521 chr12 86810970 86811646 + 3.72254652259521 NA Intergenic MLT1C|LTR|ERVL-MaLR 73506 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_161_1147_0.228047467503547_10.2789306604275_3.72078129431068 chr12 102673070 102675084 + 3.72078129431068 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 10943 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_19_168_-0.709745208651408_7.04600683195648_3.71967446821666-2 chr7 97371642 97372102 + 3.71967446821666 NA intron (NM_199035, intron 1 of 12) intron (NM_199035, intron 1 of 12) 255 NM_199035 381903 Mm.279683 NM_199035 ENSMUSG00000035704 Alg8 AI447372|Gm1089 asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) protein-coding common_peak1_19_168_-0.709745208651408_7.04600683195648_3.71967446821666 chr4 133878863 133879313 + 3.71967446821666 NA intron (NM_009097, intron 2 of 21) B1_Mus1|SINE|Alu -4357 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak1_156_1100_0.23287688084128_10.221037193985_3.71854117125397 chr6 39592042 39593389 + 3.71854117125397 NA intron (NM_026612, intron 1 of 3) CpG 132 NM_026612 68198 Mm.29415 NM_026612 ENSMUSG00000002416 Ndufb2 1810011O01Rik|8kDa|AGGG|AI325567|CI-AGGG NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2 protein-coding common_peak2_156_1100_0.23287688084128_10.221037193985_3.71854117125397 chr6 39592012 39593396 + 3.71854117125397 NA exon (NM_026612, exon 1 of 4) exon (NM_026612, exon 1 of 4) 121 NM_026612 68198 Mm.29415 NM_026612 ENSMUSG00000002416 Ndufb2 1810011O01Rik|8kDa|AGGG|AI325567|CI-AGGG NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2 protein-coding common_peak2_49_426_-0.42546475629775_8.52535988147162_3.71739609634028 chr2 127142661 127144068 + 3.71739609634028 NA promoter-TSS (NM_001163528) promoter-TSS (NM_001163528) 93 NM_001163527 73338 Mm.57559 NM_001163527 ENSMUSG00000074825 Itpripl1 1700041B20Rik inositol 1,4,5-triphosphate receptor interacting protein-like 1 protein-coding common_peak2_48_219_0.495516523386025_8.02911797521767_3.7172334339074 chr7 65644696 65645593 + 3.7172334339074 NA exon (NM_172310, exon 1 of 19) exon (NM_172310, exon 1 of 19) 246 NM_172310 272396 Mm.35127 NM_172310 ENSMUSG00000030515 Tarsl2 A530046H20Rik threonyl-tRNA synthetase-like 2 protein-coding common_peak2_305_2638_0.152641969140827_11.4420966198967_3.71713394884037 chr8 69715040 69717804 + 3.71713394884037 NA promoter-TSS (NM_181274) promoter-TSS (NM_181274) 64 NM_181274 66869 Mm.334581 NM_181274 ENSMUSG00000054648 Zfp869 1200003I07Rik zinc finger protein 869 protein-coding common_peak1_23_73_0.804322102463145_6.61161441686052_3.71675390896651 chr13 73725506 73725934 + 3.71675390896651 NA Intergenic RMER6A|LTR|ERVK -25025 NM_028878 74338 Mm.271635 NM_028878 ENSMUSG00000021565 Slc6a19 4632401C08Rik|B<0>AT1 solute carrier family 6 (neurotransmitter transporter), member 19 protein-coding unique_peak2_14_129_-0.840323691617106_6.6022059672199_3.71675390896651 chr6 136550718 136551883 + 3.71675390896651 NA intron (NM_019426, intron 1 of 14) intron (NM_019426, intron 1 of 14) 32449 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_172_1679_-0.205034986173574_10.6117280245793_3.71647675967878 chr6 21949483 21950895 + 3.71647675967878 NA intron (NM_001311061, intron 2 of 11) CpG-11887 574 NM_023626 71777 Mm.39999 NM_023626 ENSMUSG00000029670 Ing3 1300013A07Rik|P47ING3 inhibitor of growth family, member 3 protein-coding common_peak1_27_234_-0.589952196547074_7.58154084829146_3.71147954155143 chr9 21322627 21323243 + 3.71147954155143 NA intron (NM_001199186, intron 1 of 21) intron (NM_001199186, intron 1 of 21) 2216 NM_001199186 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding unique_peak2_38_156_0.578322700716233_7.58378209924974_3.71147954155143 chr12 33167703 33168861 + 3.71147954155143 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 20596 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_38_156_0.578322700716233_7.58378209924974_3.71147954155143 chr13 113545257 113546101 + 3.71147954155143 NA Intergenic PB1D11|SINE|Alu -42835 NR_045501 70917 Mm.491036 NR_045501 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak2_100_607_0.308920680161872_9.40238785352452_3.71106127699141 chr1 156717824 156719317 + 3.71106127699141 NA intron (NM_145413, intron 1 of 7) CpG 340 NM_145413 215015 Mm.229107 NM_145413 ENSMUSG00000033557 Fam20b C530043G21Rik|mKIAA0475 family with sequence similarity 20, member B protein-coding common_peak1_167_1624_-0.208912425445613_10.5617677900804_3.70981782294737 chr8 120667271 120668971 + 3.70981782294737 NA promoter-TSS (NM_001293559) promoter-TSS (NM_001293559) -9 NM_010926 18117 Mm.2136 NM_010926 ENSMUSG00000031819 Emc8 Cox4nb|Fam158b|Noc4 ER membrane protein complex subunit 8 protein-coding common_peak1_42_363_-0.462067469944746_8.27676090522632_3.70963075786514 chr9 45281995 45282728 + 3.70963075786514 NA Intergenic Intergenic -13215 NM_008348 16154 Mm.379327 NM_008348 ENSMUSG00000032089 Il10ra AW553859|CDw210|CDw210a|IL-10R1|IL-10RA|Il10r|mIL-10R interleukin 10 receptor, alpha protein-coding common_peak2_127_837_0.265283762984884_9.84344831519179_3.70909676062335 chrX 169318364 169321226 + 3.70909676062335 NA intron (NM_008222, intron 1 of 6) intron (NM_008222, intron 1 of 6) 548 NM_008222 15159 Mm.284033 NM_008222 ENSMUSG00000031352 Hccs - holocytochrome c synthetase protein-coding unique_peak1_16_41_1.01121883819541_5.89792684187647_3.70886757573671-2 chr5 121179474 121179915 + 3.70886757573671 NA intron (NM_011202, intron 1 of 15) intron (NM_011202, intron 1 of 15) 11703 NM_001109992 19247 Mm.8681 NM_011202 ENSMUSG00000043733 Ptpn11 2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp protein tyrosine phosphatase, non-receptor type 11 protein-coding common_peak1_16_41_1.01121883819541_5.89792684187647_3.70886757573671 chr10 85352137 85352607 + 3.70886757573671 NA Intergenic L1_Mus1|LINE|L1 -34442 NM_028709 74007 Mm.36544 NM_028709 ENSMUSG00000020042 Btbd11 6330404E16Rik BTB (POZ) domain containing 11 protein-coding common_peak1_16_41_1.01121883819541_5.89792684187647_3.70886757573671-2 chr15 28179947 28180329 + 3.70886757573671 NA Intergenic Intergenic -23628 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding unique_peak1_16_41_1.01121883819541_5.89792684187647_3.70886757573671 chr1 34838909 34839387 + 3.70886757573671 NA intron (NM_174997, intron 1 of 6) MTA_Mm|LTR|ERVL-MaLR 3902 NM_001160235 214469 Mm.120151 NM_174997 ENSMUSG00000037503 Fam168b mKIAA4042 family with sequence similarity 168, member B protein-coding common_peak1_16_41_1.01121883819541_5.89792684187647_3.70886757573671-3 chr2 35708736 35709166 + 3.70886757573671 NA intron (NM_001290639, intron 3 of 13) intron (NM_001290639, intron 3 of 13) 12219 NM_001290639 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_59_294_0.430697599534856_8.41991994401663_3.70794745756476 chr12 100778841 100779837 + 3.70794745756476 NA intron (NM_145448, intron 1 of 12) intron (NM_145448, intron 1 of 12) 216 NM_145448 217830 Mm.218590 NM_145448 ENSMUSG00000021185 9030617O03Rik - RIKEN cDNA 9030617O03 gene protein-coding common_peak2_385_3558_0.132161386122828_11.8633369105712_3.70775014542769 chr11 90223736 90228622 + 3.70775014542769 NA Intergenic RMER1B|Other|Other -23297 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak2_29_251_-0.568623490902214_7.69296817804881_3.70631654943094 chr6 86644589 86646231 + 3.70631654943094 NA Intergenic Intergenic 17236 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak2_93_845_-0.294770454507574_9.57712862586616_3.70550199780107 chrX 57052773 57054364 + 3.70550199780107 NA promoter-TSS (NM_028242) promoter-TSS (NM_028242) -2 NM_028242 72459 Mm.2152 NM_028242 ENSMUSG00000067873 Htatsf1 1600023H17Rik|2600017A12Rik|2700077B20Rik|TAT-SF1 HIV TAT specific factor 1 protein-coding common_peak2_36_311_-0.505618567650838_8.03259293503683_3.70423776720989 chr12 75635364 75636737 + 3.70423776720989 NA intron (NM_028203, intron 1 of 1) intron (NM_028203, intron 1 of 1) -4301 NR_038063 665931 Mm.341719 NR_038063 Rplp2-ps1 Gm7852 ribosomal protein, large P2, pseudogene 1 pseudo common_peak2_92_835_-0.296542411193293_9.55908792648424_3.7039044988849 chr15 84683443 84686400 + 3.7039044988849 NA intron (NM_146061, intron 1 of 7) MLT1D|LTR|ERVL-MaLR 3923 NM_146061 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding common_peak2_98_591_0.312001098185215_9.36545391472156_3.70348675863957 chr1 12644461 12644928 + 3.70348675863957 NA Intergenic MIR|SINE|MIR -22869 NR_045297 329096 Mm.417782 NR_045297 ENSMUSG00000097171 Gm17644 4932411L15 predicted gene, 17644 ncRNA common_peak2_98_591_0.312001098185215_9.36545391472156_3.70348675863957-2 chr8 112010687 112012316 + 3.70348675863957 NA promoter-TSS (NM_053092) promoter-TSS (NM_053092) 142 NM_020584 57321 Mm.213064 NM_020584 ENSMUSG00000033430 Terf2ip Rap1 telomeric repeat binding factor 2, interacting protein protein-coding common_peak1_50_435_-0.42051354764947_8.55792755095219_3.70289729096324 chr1 118389394 118390212 + 3.70289729096324 NA intron (NM_001293300, intron 1 of 40) intron (NM_001293300, intron 1 of 40) 745 NM_001293301 76707 Mm.138740 NM_029709 ENSMUSG00000064302 Clasp1 1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha CLIP associating protein 1 protein-coding common_peak1_50_435_-0.42051354764947_8.55792755095219_3.70289729096324-2 chr17 34604179 34604903 + 3.70289729096324 NA promoter-TSS (NM_019403) promoter-TSS (NM_019403) -980 NM_019403 54197 Mm.274542 NM_019403 ENSMUSG00000015478 Rnf5 2410131O05Rik|AA407576|NG2 ring finger protein 5 protein-coding common_peak2_380_3500_0.132793863898824_11.8399482783779_3.70253699073133 chr9 14497919 14501593 + 3.70253699073133 NA promoter-TSS (NM_023153) promoter-TSS (NM_023153) 726 NM_173433 244694 Mm.240457 NM_173433 ENSMUSG00000053914 Kdm4d 4932416A15|Jmjd2d lysine (K)-specific demethylase 4D protein-coding common_peak2_41_175_0.544655336347557_7.73175928681108_3.70148071470606 chr18 35702608 35703630 + 3.70148071470606 NA promoter-TSS (NM_029669) promoter-TSS (NM_029669) 25 NM_029669 76594 Mm.108596 NM_029669 ENSMUSG00000024350 Dnajc18 2700075B01Rik|AU041129 DnaJ heat shock protein family (Hsp40) member C18 protein-coding common_peak1_41_175_0.544655336347557_7.73175928681108_3.70148071470606 chr1 173877887 173878744 + 3.70148071470606 NA intron (NM_001170853, intron 2 of 9) intron (NM_001170853, intron 2 of 9) 1872 NM_001170853 100040462 Mm.463437 NM_001170853 ENSMUSG00000090272 Mndal Gm2785|Ifi212 myeloid nuclear differentiation antigen like protein-coding common_peak1_90_815_-0.300080299251448_9.52238519234577_3.7014705035571 chr7 118128841 118129706 + 3.7014705035571 NA intron (NM_019419, intron 1 of 5) intron (NM_019419, intron 1 of 5) 352 NM_019419 54208 Mm.29924 NM_019419 ENSMUSG00000030654 Arl6ip1 AIP-6|AL022945|ARMER|AU042858|Aip-1|Arl6ip|C85138|mKIAA0069 ADP-ribosylation factor-like 6 interacting protein 1 protein-coding common_peak1_110_691_0.28928993972797_9.57927319750071_3.70105685067999 chr1 85894310 85895801 + 3.70105685067999 NA intron (NM_022417, intron 1 of 5) intron (NM_022417, intron 1 of 5) 545 NM_022417 64294 Mm.29870 NM_022417 ENSMUSG00000026223 Itm2c 3110038L02Rik|BRI3|Bricd2c|E25|E25C|ITM3 integral membrane protein 2C protein-coding common_peak2_70_373_0.38626508595938_8.74002700286733_3.7010494932043 chr1 21303649 21306559 + 3.7010494932043 NA Intergenic B3|SINE|B2 -6792 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo common_peak2_54_259_0.458923205357461_8.25182941570718_3.7009806804874 chr1 173598415 173599855 + 3.7009806804874 NA 5' UTR (NM_001177349, exon 1 of 4) 5' UTR (NM_001177349, exon 1 of 4) 139 NM_001177349 623121 Mm.138449 NM_001033384 ENSMUSG00000073491 Ifi213 E030037K03Rik|E430029J22Rik|Pydc4|Pyr-A interferon activated gene 213 protein-coding common_peak1_126_829_0.265243167939758_9.82958911020417_3.70049209164483 chr5 122284258 122285383 + 3.70049209164483 NA exon (NM_177242, exon 1 of 6) exon (NM_177242, exon 1 of 6) 422 NM_177242 320717 Mm.489670 NM_177242 ENSMUSG00000038582 Pptc7 9130017A15Rik|AA672638|AI848390|TA-PP2C PTC7 protein phosphatase homolog protein-coding common_peak1_85_765_-0.308861100484652_9.42677003168263_3.70031440517844 chr15 76189390 76190399 + 3.70031440517844 NA intron (NM_201385, intron 12 of 31) intron (NM_201385, intron 12 of 31) 5816 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_215_1677_0.189517499958839_10.8072857504192_3.70003121343602 chr13 111488278 111490115 + 3.70003121343602 NA intron (NM_028487, intron 1 of 12) CpG 845 NM_028487 73274 Mm.57286 NM_028487 ENSMUSG00000032745 Gpbp1 1700034P14Rik|AU019836|D230035M11Rik|Gpbp|mGPBP GC-rich promoter binding protein 1 protein-coding common_peak1_136_1288_-0.235698991826792_10.2141870524483_3.69900882384246 chr17 57289332 57291034 + 3.69900882384246 NA intron (NM_001163815, intron 2 of 27) intron (NM_001163815, intron 2 of 27) 11083 NM_001163815 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding common_peak2_105_965_-0.273525302206306_9.77911672773262_3.69817987177308 chr4 97771590 97773440 + 3.69817987177308 NA intron (NM_001122952, intron 1 of 10) intron (NM_001122952, intron 1 of 10) -5111 NM_001122953 18027 Mm.31274 NM_010905 ENSMUSG00000028565 Nfia 1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A nuclear factor I/A protein-coding common_peak1_123_1151_-0.250018174335294_10.0449159142747_3.69803309443357 chr2 178287655 178288935 + 3.69803309443357 NA intron (NM_001177789, intron 7 of 12) MLT2C1|LTR|ERVL 95211 NM_001007154 74189 Mm.44413 NM_028806 ENSMUSG00000027525 Phactr3 1500003N10Rik|4930415A02Rik|H17739|Scapin1|Scapinin|mKIAA4224 phosphatase and actin regulator 3 protein-coding common_peak1_317_3393_-0.142282256759911_11.6576297211627_3.69738940498181 chr19 21271308 21273565 + 3.69738940498181 NA 5' UTR (NM_009551, exon 1 of 6) 5' UTR (NM_009551, exon 1 of 6) 158 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding common_peak2_33_127_0.630148572160527_7.31507428608026_3.69646650151337 chr3 153764914 153765695 + 3.69646650151337 NA Intergenic Intergenic 26783 NR_045801 70594 Mm.491050 NR_045801 ENSMUSG00000062046 5730460C07Rik - RIKEN cDNA 5730460C07 gene ncRNA common_peak1_33_127_0.630148572160527_7.31507428608026_3.69646650151337 chr17 31841451 31842225 + 3.69646650151337 NA Intergenic Intergenic 13954 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak1_33_127_0.630148572160527_7.31507428608026_3.69646650151337-2 chr7 101459166 101459991 + 3.69646650151337 NA intron (NM_001008548, intron 2 of 30) intron (NM_001008548, intron 2 of 30) 8326 NM_001243757 207728 Mm.247564 NM_001008548 ENSMUSG00000030653 Pde2a CGS-PDE|cGSPDE phosphodiesterase 2A, cGMP-stimulated protein-coding common_peak1_22_193_-0.661452038093618_7.26918682314032_3.69627986361269 chr16 92803401 92803994 + 3.69627986361269 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 22377 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_49_226_0.486079016031826_8.06958799530683_3.69587760342226-2 chr15 60171284 60172991 + 3.69587760342226 NA Intergenic L1_Mus3|LINE|L1 -155519 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_49_226_0.486079016031826_8.06958799530683_3.69587760342226-3 chr4 43009801 43011014 + 3.69587760342226 NA promoter-TSS (NM_053081) promoter-TSS (NM_053081) -106 NM_053081 60534 Mm.23122 NM_053081 ENSMUSG00000028453 Fancg AU041407|Xrcc9 Fanconi anemia, complementation group G protein-coding common_peak2_49_226_0.486079016031826_8.06958799530683_3.69587760342226 chr11 59947894 59948793 + 3.69587760342226 NA promoter-TSS (NR_045273) promoter-TSS (NR_045273) 129 NM_138675 192191 Mm.125288 NM_138675 ENSMUSG00000061650 Med9 BC019367|Med25 mediator complex subunit 9 protein-coding common_peak1_20_59_0.870584048189979_6.34218261970351_3.69571023745725 chr10 40527300 40527703 + 3.69571023745725 NA Intergenic Intergenic -42861 NM_027572 70840 Mm.332570 NM_027572 ENSMUSG00000019834 Slc22a16 4921504E14Rik|CT2|FLIPT2|OCT6|OKB1 solute carrier family 22 (organic cation transporter), member 16 protein-coding common_peak1_20_59_0.870584048189979_6.34218261970351_3.69571023745725-4 chr3 95427457 95427942 + 3.69571023745725 NA intron (NR_033637, intron 1 of 2) CpG 350 NR_033637 100043305 Mm.412052 NR_033637 Gm4349 - SET domain, bifurcated 1 pseudogene pseudo unique_peak1_20_59_0.870584048189979_6.34218261970351_3.69571023745725 chr4 62671897 62672415 + 3.69571023745725 NA intron (NM_134257, intron 10 of 15) MIR3|SINE|MIR -1818 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_20_59_0.870584048189979_6.34218261970351_3.69571023745725-5 chr5 3460782 3461237 + 3.69571023745725 NA intron (NM_009873, intron 4 of 7) intron (NM_009873, intron 4 of 7) -82824 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak1_20_59_0.870584048189979_6.34218261970351_3.69571023745725-2 chr11 55030242 55030667 + 3.69571023745725 NA intron (NM_013472, intron 1 of 25) B2_Mm1t|SINE|B2 3017 NM_001110211 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak1_20_59_0.870584048189979_6.34218261970351_3.69571023745725-3 chr11 120086275 120086749 + 3.69571023745725 NA intron (NM_009734, intron 1 of 25) CpG 315 NM_009734 12009 Mm.2556 NM_009734 ENSMUSG00000039781 Cep131 AZ1|Azi|Azi1 centrosomal protein 131 protein-coding unique_peak1_20_59_0.870584048189979_6.34218261970351_3.69571023745725-2 chr4 137371832 137372331 + 3.69571023745725 NA Intergenic Intergenic -14322 NM_001243769 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak1_34_293_-0.51822663031283_7.94055902967995_3.6955094221712 chr5 120323681 120324176 + 3.6955094221712 NA Intergenic MTEa|LTR|ERVL-MaLR -107958 NM_008499 16873 Mm.5151 NM_008499 ENSMUSG00000029595 Lhx5 Lim2 LIM homeobox protein 5 protein-coding common_peak2_203_2028_-0.185657750256491_10.8937242746284_3.69476570392437 chr6 108501214 108505624 + 3.69476570392437 NA intron (NM_010585, intron 53 of 61) L1ME1|LINE|L1 13676 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_454_5166_-0.114660538826495_12.2777808990116_3.6938560419497 chr5 144220077 144224685 + 3.6938560419497 NA intron (NM_027410, intron 1 of 24) B4|SINE|B4 1197 NM_027410 70381 Mm.239412 NM_027410 ENSMUSG00000066621 Tecpr1 2210010N04Rik|mKIAA1358 tectonin beta-propeller repeat containing 1 protein-coding common_peak2_72_388_0.378692681399436_8.79297268568591_3.69297536720364 chr6 129218147 129220608 + 3.69297536720364 NA Intergenic Lx5|LINE|L1 18668 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak1_190_1427_0.204591241957695_10.5820758850079_3.69297026013786 chr5 21372080 21373970 + 3.69297026013786 NA exon (NM_008013, exon 1 of 2) exon (NM_008013, exon 1 of 2) 352 NM_008013 14190 Mm.292100 NM_008013 ENSMUSG00000039899 Fgl2 AI385601|musfiblp fibrinogen-like protein 2 protein-coding unique_peak2_8_82_-1.09696638066061_5.82655624101662_3.69288523221345-3 chr7 25379442 25380149 + 3.69288523221345 NA 3' UTR (NM_010719, exon 10 of 10) 3' UTR (NM_010719, exon 10 of 10) 2976 NR_073027 654804 Mm.389841 NM_001039540 ENSMUSG00000053714 4732471J01Rik - RIKEN cDNA 4732471J01 gene ncRNA unique_peak2_8_82_-1.09696638066061_5.82655624101662_3.69288523221345 chr17 34263030 34263709 + 3.69288523221345 NA exon (NM_207105, exon 1 of 6) exon (NM_207105, exon 1 of 6) 142 NM_207105 14961 Mm.254067 NM_207105 ENSMUSG00000073421 H2-Ab1 AI845868|Abeta|H-2Ab|H2-Ab|I-Abeta|IAb|Ia-2|Ia2|Rmcs1 histocompatibility 2, class II antigen A, beta 1 protein-coding unique_peak2_8_82_-1.09696638066061_5.82655624101662_3.69288523221345-2 chr5 142375801 142376481 + 3.69288523221345 NA Intergenic B1_Mus2|SINE|Alu -25356 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf forkhead box K1 protein-coding common_peak2_57_498_-0.387620379638335_8.76908581551809_3.6928034212081 chr10 96213463 96215340 + 3.6928034212081 NA Intergenic Intergenic -11806 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_57_498_-0.387620379638335_8.76908581551809_3.6928034212081 chr18 62180045 62180710 + 3.6928034212081 NA promoter-TSS (NM_007420) promoter-TSS (NM_007420) -396 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak1_57_498_-0.387620379638335_8.76908581551809_3.6928034212081-2 chr19 53531590 53532650 + 3.6928034212081 NA intron (NM_001085390, intron 1 of 3) intron (NM_001085390, intron 1 of 3) 2802 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak1_64_564_-0.365192536969653_8.95951078881772_3.69261886005398 chr6 85137337 85138088 + 3.69261886005398 NA promoter-TSS (NM_011467) promoter-TSS (NM_011467) 52 NM_011467 20751 Mm.28393 NM_011467 ENSMUSG00000033735 Spr AA409688|ENSMUSG00000071345|Gm10328 sepiapterin reductase protein-coding common_peak1_230_1831_0.181652268829406_10.9300299225116_3.69237455648744 chr17 20944569 20946403 + 3.69237455648744 NA promoter-TSS (NM_016891) promoter-TSS (NM_016891) 32 NM_016891 51792 Mm.294138 NM_016891 ENSMUSG00000007564 Ppp2r1a 6330556D22Rik|PP2A|PR65 protein phosphatase 2, regulatory subunit A, alpha protein-coding common_peak1_365_3324_0.136127653110698_11.7672024518313_3.69113560163727 chr1 36307635 36309796 + 3.69113560163727 NA intron (NM_001290727, intron 1 of 5) intron (NM_001290727, intron 1 of 5) 982 NM_001172205 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding common_peak2_166_1195_0.222744931489855_10.335374139943_3.6903724581839 chr11 103343533 103345925 + 3.6903724581839 NA promoter-TSS (NR_045346) promoter-TSS (NR_045346) -24 NR_045346 653030 Mm.440684 NR_045346 ENSMUSG00000085887 Arhgap27os3 F830206d12rik|Gm11648|OTTMUSG00000003073 Rho GTPase activating protein 27, opposite strand 3 ncRNA common_peak1_47_407_-0.432037562693043_8.45640656062497_3.6901375043561 chr9 94691920 94692658 + 3.6901375043561 NA intron (NM_177909, intron 2 of 15) intron (NM_177909, intron 2 of 15) 22397 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak2_65_573_-0.360974667828451_8.98441959276146_3.689511603059 chr17 45973142 45975292 + 3.689511603059 NA Intergenic GA-rich|Low_complexity|Low_complexity 50946 NM_001110267 22339 Mm.282184 NM_009505 ENSMUSG00000023951 Vegfa Vegf|Vpf vascular endothelial growth factor A protein-coding unique_peak2_55_266_0.452481129516727_8.28693649644592_3.68784244706455 chr15 77822401 77824352 + 3.68784244706455 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 18799 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_252_2600_-0.163008466721628_11.2633464505822_3.68723623024331 chr11 67478848 67481678 + 3.68723623024331 NA Intergenic L1MB5|LINE|L1 -52735 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_66_582_-0.356808373050773_9.00894788667511_3.68692766899839 chr8 83566317 83567565 + 3.68692766899839 NA intron (NM_025843, intron 1 of 2) CpG 183 NM_025843 66916 Mm.29683 NM_025843 ENSMUSG00000033938 Ndufb7 1110002H15Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 protein-coding common_peak1_172_1678_-0.204175983444481_10.6112985232148_3.68683222812333 chr11 62549681 62551306 + 3.68683222812333 NA promoter-TSS (NM_011664) promoter-TSS (NM_011664) -678 NM_011664 22187 Mm.371592 NM_011664 ENSMUSG00000019505 Ubb AL033289|Rps27a|Uba52|Ubb2|Ubc ubiquitin B protein-coding common_peak2_92_543_0.323353879637251_9.24913978106897_3.68677996884717 chr9 59539043 59541086 + 3.68677996884717 NA intron (NM_010421, intron 1 of 13) intron (NM_010421, intron 1 of 13) 397 NM_010421 15211 Mm.2284 NM_010421 ENSMUSG00000025232 Hexa Hex-1 hexosaminidase A protein-coding common_peak2_130_864_0.260530939322786_9.88682179218548_3.686760052562 chr4 117914172 117915743 + 3.686760052562 NA promoter-TSS (NM_146152) promoter-TSS (NM_146152) 42 NM_146152 230673 Mm.287810 NM_146152 ENSMUSG00000033365 Ipo13 Imp13|Kap13|Ranbp13 importin 13 protein-coding common_peak1_43_372_-0.45662176637493_8.31472093706777_3.68656415691684 chr4 108301198 108301943 + 3.68656415691684 NA promoter-TSS (NM_001033634) promoter-TSS (NM_001033634) -480 NM_001033634 414872 Mm.426241 NM_001033634 ENSMUSG00000034636 Zyg11b 1110046I03Rik|2810482G21Rik|D4Mgi23|Gm431|mKIAA1730 zyg-ll family member B, cell cycle regulator protein-coding common_peak1_195_1937_-0.190251996131684_10.8252268573492_3.6863123977798 chr10 118440340 118443004 + 3.6863123977798 NA intron (NM_008337, intron 1 of 3) intron (NM_008337, intron 1 of 3) 626 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak2_62_315_0.41782841177468_8.51269495406444_3.68627699744776 chr2 130283789 130285092 + 3.68627699744776 NA promoter-TSS (NM_130884) promoter-TSS (NM_130884) 11 NM_130884 170718 Mm.29590 NM_130884 ENSMUSG00000027406 Idh3b C78231 isocitrate dehydrogenase 3 (NAD+) beta protein-coding common_peak2_102_935_-0.278816835806666_9.73095630168007_3.68602407622195 chr11 3912902 3914941 + 3.68602407622195 NA 5' UTR (NM_153142, exon 1 of 2) 5' UTR (NM_153142, exon 1 of 2) 743 NM_153142 103710 Mm.171514 NM_153142 ENSMUSG00000048807 Slc35e4 A330108F03Rik|AI414849|AI536442 solute carrier family 35, member E4 protein-coding common_peak1_52_452_-0.407625474603122_8.61955450274467_3.68599478552784 chr11 107408865 107409906 + 3.68599478552784 NA intron (NM_145823, intron 1 of 9) AT_rich|Low_complexity|Low_complexity 61335 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_52_452_-0.407625474603122_8.61955450274467_3.68599478552784 chr5 72730970 72733377 + 3.68599478552784 NA intron (NM_001289495, intron 4 of 14) PB1D10|SINE|Alu 4429 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_91_535_0.325596236008451_9.228887308462_3.68498462811663 chr9 108104525 108106102 + 3.68498462811663 NA exon (NM_007567, exon 7 of 12) exon (NM_007567, exon 7 of 12) -10833 NM_146226 235606 Mm.219639 NM_146226 ENSMUSG00000032590 Apeh - acylpeptide hydrolase protein-coding common_peak1_136_918_0.252416505245824_9.97012930391195_3.68493425700789 chr10 19907113 19907915 + 3.68493425700789 NA exon (NM_008822, exon 1 of 10) exon (NM_008822, exon 1 of 10) 160 NM_008822 18634 Mm.338363 NM_008822 ENSMUSG00000020003 Pex7 MmPEX7 peroxisomal biogenesis factor 7 protein-coding common_peak2_40_345_-0.4731849625713_8.19803574635108_3.68492432835784 chr5 3501095 3502833 + 3.68492432835784 NA intron (NM_009873, intron 5 of 7) intron (NM_009873, intron 5 of 7) -41869 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak1_90_527_0.327950923361593_9.20836958103925_3.68350432806719 chr6 149193836 149195088 + 3.68350432806719 NA Intergenic Intergenic -5750 NM_001113424 232566 Mm.209147 NM_001113424 ENSMUSG00000068250 Amn1 5830467E07Rik|A230083D09|C730024G19Rik antagonist of mitotic exit network 1 protein-coding common_peak2_85_487_0.341602143877418_9.1015384095016_3.68133970743029 chr3 135211635 135212937 + 3.68133970743029 NA promoter-TSS (NM_173762) promoter-TSS (NM_173762) -277 NM_173762 229841 Mm.161470 NM_173762 ENSMUSG00000045328 Cenpe 312kDa|AU019344|BC049989|C530022J18|CENP-E|Kif10 centromere protein E protein-coding common_peak1_24_209_-0.628230325529739_7.40013035490125_3.68065603501769 chr12 33157986 33158440 + 3.68065603501769 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 10527 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_24_209_-0.628230325529739_7.40013035490125_3.68065603501769 chr17 34644679 34645411 + 3.68065603501769 NA intron (NM_019873, intron 1 of 1) intron (NM_019873, intron 1 of 1) 162 NM_019873 56299 Mm.10025 NM_019873 ENSMUSG00000033739 Fkbpl DIR1|NG7|Ppiase-X|Wisp39 FK506 binding protein-like protein-coding unique_peak2_24_209_-0.628230325529739_7.40013035490125_3.68065603501769 chr5 121107156 121108370 + 3.68065603501769 NA Intergenic MTA_Mm|LTR|ERVL-MaLR 83634 NM_001109992 19247 Mm.8681 NM_011202 ENSMUSG00000043733 Ptpn11 2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp protein tyrosine phosphatase, non-receptor type 11 protein-coding common_peak1_24_209_-0.628230325529739_7.40013035490125_3.68065603501769-2 chr15 12210807 12211452 + 3.68065603501769 NA intron (NM_172958, intron 1 of 15) RSINE1|SINE|B4 6035 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak1_173_1262_0.216771218064656_10.4110245328199_3.67964722262551 chr15 58932836 58934383 + 3.67964722262551 NA promoter-TSS (NM_023172) promoter-TSS (NM_023172) 121 NM_175151 69694 Mm.383230 NM_175151 ENSMUSG00000050891 Tatdn1 2310079P03Rik|CDA11 TatD DNase domain containing 1 protein-coding common_peak1_15_37_1.04832574968158_5.77209038828438_3.67938674478694 chr11 117337186 117337486 + 3.67938674478694 NA intron (NM_001113488, intron 1 of 9) B1_Mur2|SINE|Alu 5023 NM_001113488 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak1_15_37_1.04832574968158_5.77209038828438_3.67938674478694-2 chr5 3800715 3801050 + 3.67938674478694 NA intron (NM_001003909, intron 1 of 19) intron (NM_001003909, intron 1 of 19) 2242 NM_001289528 70797 Mm.130148 NM_001003909 ENSMUSG00000040351 Ankib1 2310061P20Rik|4631416I11Rik|AW494740|C80642|mKIAA1386 ankyrin repeat and IBR domain containing 1 protein-coding unique_peak1_15_37_1.04832574968158_5.77209038828438_3.67938674478694 chr4 46426323 46426776 + 3.67938674478694 NA Intergenic B1_Mur4|SINE|Alu -22366 NM_053149 93966 Mm.25793 NM_053149 ENSMUSG00000028332 Hemgn 4921524M03Rik|AI317176|EDAG|Hgn|mNDR hemogen protein-coding unique_peak2_32_276_-0.536422218388309_7.84553105685503_3.67933454068467 chr2 119337280 119338676 + 3.67933454068467 NA Intergenic CpG -11781 NR_030683 100043609 Mm.185068 NR_030683 ENSMUSG00000074912 Gm14207 Dll4|OTTMUSG00000015946 predicted gene 14207 ncRNA common_peak1_32_276_-0.536422218388309_7.84553105685503_3.67933454068467-2 chr7 16782178 16782891 + 3.67933454068467 NA intron (NM_009201, intron 1 of 8) B1F1|SINE|Alu 1188 NM_009201 20514 Mm.1056 NM_009201 ENSMUSG00000001918 Slc1a5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC|Slc1a7 solute carrier family 1 (neutral amino acid transporter), member 5 protein-coding common_peak1_32_276_-0.536422218388309_7.84553105685503_3.67933454068467 chr11 70028542 70029236 + 3.67933454068467 NA intron (NM_001109752, intron 2 of 19) intron (NM_001109752, intron 2 of 19) 10284 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs, large homolog 4 (Drosophila) protein-coding common_peak2_219_1718_0.187161811280566_10.8409347351183_3.67856081701086 chr9 66263792 66268304 + 3.67856081701086 NA intron (NM_010019, intron 9 of 11) intron (NM_010019, intron 9 of 11) -84402 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak1_146_1009_0.240871175424811_10.1005751653516_3.6785261445761 chr19 4293516 4295580 + 3.6785261445761 NA intron (NM_130863, intron 3 of 21) intron (NM_130863, intron 3 of 21) -11411 NM_026720 68423 Mm.23642 NM_026720 ENSMUSG00000005986 Ankrd13d 0710001P18Rik|AI430801 ankyrin repeat domain 13 family, member D protein-coding common_peak1_26_225_-0.597971395575593_7.52119326462739_3.6780897194986-2 chr9 120053191 120053757 + 3.6780897194986 NA intron (NM_009987, intron 1 of 1) MTEb|LTR|ERVL-MaLR 14822 NM_009987 13051 Mm.44065 NM_009987 ENSMUSG00000052336 Cx3cr1 - chemokine (C-X3-C motif) receptor 1 protein-coding common_peak1_26_225_-0.597971395575593_7.52119326462739_3.6780897194986 chr18 79300281 79300875 + 3.6780897194986 NA Intergenic Intergenic -191187 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding unique_peak1_19_54_0.909774514106116_6.23624697057772_3.67799106173239 chr2 85060810 85061351 + 3.67799106173239 NA intron (NM_001081260, intron 5 of 11) intron (NM_001081260, intron 5 of 11) 10620 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding common_peak1_19_54_0.909774514106116_6.23624697057772_3.67799106173239 chr15 60171193 60171695 + 3.67799106173239 NA Intergenic L1VL2|LINE|L1 -154826 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_21_184_-0.671583717822361_7.19558960160513_3.67725846303691 chr3 89246371 89246823 + 3.67725846303691 NA promoter-TSS (NM_183037) promoter-TSS (NM_183037) 124 NM_001310625 66059 Mm.177991 NM_025327 ENSMUSG00000042747 Krtcap2 0610010I12Rik|Kcp2 keratinocyte associated protein 2 protein-coding common_peak2_50_233_0.477306057544052_8.10901774835543_3.67646418452944 chr4 32350987 32352100 + 3.67646418452944 NA Intergenic Intergenic -65892 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_98_894_-0.284289408337454_9.66359916798289_3.67638262416098 chr11 88114336 88115898 + 3.67638262416098 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) 15971 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak1_98_894_-0.284289408337454_9.66359916798289_3.67638262416098-2 chr8 85024887 85025793 + 3.67638262416098 NA promoter-TSS (NM_019652) promoter-TSS (NM_019652) -62 NM_019652 56495 Mm.41475 NM_019652 ENSMUSG00000052456 Asna1 1810048H22Rik|ArsA arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) protein-coding unique_peak1_12_25_1.22836921531349_5.31462432579783_3.67636296827729-2 chr5 114680480 114680756 + 3.67636296827729 NA intron (NM_019821, intron 1 of 4) intron (NM_019821, intron 1 of 4) 10317 NM_019821 56356 Mm.275766 NM_019821 ENSMUSG00000011884 Gltp 1110001F24Rik|C76925|C77564 glycolipid transfer protein protein-coding unique_peak1_12_25_1.22836921531349_5.31462432579783_3.67636296827729-3 chr9 90262948 90263358 + 3.67636296827729 NA intron (NM_194334, intron 1 of 12) intron (NM_194334, intron 1 of 12) 7616 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding unique_peak1_12_25_1.22836921531349_5.31462432579783_3.67636296827729 chr17 27363458 27363869 + 3.67636296827729 NA Intergenic ORR1F|LTR|ERVL-MaLR 5566 NR_106077 102466228 NR_106077 ENSMUSG00000106215 Mir7218 mmu-mir-7218 microRNA 7218 ncRNA common_peak2_56_273_0.446466636589646_8.32126540125535_3.67599747653869 chr1 184731747 184733237 + 3.67599747653869 NA promoter-TSS (NM_008250) promoter-TSS (NM_008250) 1 NM_008250 15284 Mm.1347 NM_008250 ENSMUSG00000039377 Hlx Hlx1 H2.0-like homeobox protein-coding unique_peak2_27_94_0.716709141686978_6.92821017917444_3.67498232531764 chr5 72817448 72818439 + 3.67498232531764 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) 50505 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak1_27_94_0.716709141686978_6.92821017917444_3.67498232531764 chr15 64206636 64207207 + 3.67498232531764 NA intron (NM_001276462, intron 2 of 27) MT2A|LTR|ERVL 105752 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak1_27_94_0.716709141686978_6.92821017917444_3.67498232531764-2 chr4 132951238 132951787 + 3.67498232531764 NA Intergenic Intergenic -22583 NM_010208 14191 Mm.271665 NM_010208 ENSMUSG00000028874 Fgr - FGR proto-oncogene, Src family tyrosine kinase protein-coding common_peak1_118_1098_-0.254903300709588_9.97452402059444_3.67485215058357 chr7 30231151 30232840 + 3.67485215058357 NA promoter-TSS (NM_027259) promoter-TSS (NM_027259) 34 NM_025548 66411 Mm.27947 NM_025548 ENSMUSG00000006095 Tbcb 2410007D12Rik|AU041393|CG22|CKAPI|Ckap1 tubulin folding cofactor B protein-coding common_peak2_53_461_-0.402929163390107_8.650284459721_3.67466180516419 chr3 28243761 28245435 + 3.67466180516419 NA Intergenic MTEa|LTR|ERVL-MaLR -18616 NM_001163007 665113 Mm.126193 NM_026910 ENSMUSG00000027692 Tnik 1500031A17Rik|4831440I19Rik|AI451411|C530008O15Rik|C630040K21Rik TRAF2 and NCK interacting kinase protein-coding unique_peak2_9_89_-1.02733117988526_5.97818750638705_3.67337952714053-2 chr6 83448677 83449573 + 3.67337952714053 NA TTS (NR_028382) TTS (NR_028382) 7370 NR_028382 320775 Mm.434334 NR_028382 ENSMUSG00000051844 B230319C09Rik - RIKEN cDNA B230319C09 gene ncRNA unique_peak2_9_89_-1.02733117988526_5.97818750638705_3.67337952714053 chr11 5061388 5062343 + 3.67337952714053 NA intron (NM_001190408, intron 5 of 5) CpG 3462 NM_144560 78926 Mm.44591 NM_030228 ENSMUSG00000034201 Gas2l1 4930500E24Rik|D0Jmb1|Gar22|TU-71.1 growth arrest-specific 2 like 1 protein-coding common_peak1_182_1789_-0.197089904951362_10.7071989196759_3.67324285203392 chr2 152788435 152790750 + 3.67324285203392 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 35419 NM_053091 84682 Mm.196668 NM_053091 ENSMUSG00000009876 Cox4i2 Cox4b|CoxIV-2 cytochrome c oxidase subunit IV isoform 2 protein-coding common_peak2_295_2528_0.15526926310724_11.3819859532169_3.67299656840316 chr14 57744806 57747175 + 3.67299656840316 NA 5' UTR (NM_015771, exon 1 of 8) 5' UTR (NM_015771, exon 1 of 8) 133 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak2_36_145_0.589959092331393_7.48480410504571_3.67143299136054 chr2 103754014 103754995 + 3.67143299136054 NA intron (NM_153126, intron 3 of 28) (CA)n|Simple_repeat|Simple_repeat 6746 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak2_131_1234_-0.239750756438449_10.1504199482528_3.67101803457401 chr14 102805537 102807795 + 3.67101803457401 NA Intergenic Intergenic 175966 NR_039592 100628599 NR_039592 ENSMUSG00000092901 Mir5130 mir-5130|mmu-mir-5130|mu-mir-5130 microRNA 5130 ncRNA common_peak1_30_259_-0.555685608294148_7.74452500888138_3.66990582714013 chrX 106186621 106187141 + 3.66990582714013 NA promoter-TSS (NM_008828) promoter-TSS (NM_008828) -219 NM_008828 18655 Mm.316355 NM_008828 ENSMUSG00000062070 Pgk1 Pgk-1 phosphoglycerate kinase 1 protein-coding common_peak2_29_105_0.680735978034504_7.06828844358045_3.66898103658661 chr11 21447716 21448752 + 3.66898103658661 NA Intergenic L1Md_F2|LINE|L1 62946 NR_028259 237694 Mm.72926 NM_172792 ENSMUSG00000078962 4932414J04Rik - RIKEN cDNA 4932414J04 gene ncRNA common_peak1_28_242_-0.576149189093213_7.63673790905917_3.66879192274519 chr17 34630380 34630861 + 3.66879192274519 NA intron (NM_030890, intron 1 of 3) intron (NM_030890, intron 1 of 3) 934 NM_030890 260297 Mm.390965 NM_030890 ENSMUSG00000015476 Prrt1 Bat-4|Bat4|D17H6S54E|DSPD1|G5b|NG5|ORF31 proline-rich transmembrane protein 1 protein-coding common_peak2_39_163_0.560194534199049_7.63764927171761_3.66879192274514 chr19 43939526 43940390 + 3.66879192274514 NA intron (NM_028029, intron 1 of 15) CpG 240 NM_028029 71972 Mm.159024 NM_028029 ENSMUSG00000025195 Dnmbp 2410003L07Rik|2410003M15Rik|TUBA dynamin binding protein protein-coding common_peak2_46_207_0.502691369284926_7.95178540278356_3.66817803532303 chr1 86732818 86734160 + 3.66817803532303 NA intron (NM_153530, intron 1 of 20) L1MA8|LINE|L1 29685 NM_001172157 208718 Mm.389152 NM_153530 ENSMUSG00000053333 Dis3l2 4930429A22Rik|8030493P09Rik DIS3 like 3'-5' exoribonuclease 2 protein-coding common_peak1_46_207_0.502691369284926_7.95178540278356_3.66817803532303 chr9 41228666 41229499 + 3.66817803532303 NA Intergenic Intergenic 22927 NR_040392 78500 Mm.275715 NR_040392 ENSMUSG00000100837 1700063D05Rik - RIKEN cDNA 1700063D05 gene ncRNA common_peak1_64_330_0.406227113525679_8.57380096357006_3.66726589995905 chr13 67450960 67451803 + 3.66726589995905 NA intron (NM_177712, intron 1 of 3) intron (NM_177712, intron 1 of 3) 243 NM_177712 238692 Mm.486478 NM_177712 ENSMUSG00000069206 Zfp874a C330011K17Rik|Rslcan15|Zfp874 zinc finger protein 874a protein-coding common_peak1_302_2606_0.152807842223185_11.4245787886471_3.66649825531622 chr7 141094890 141097528 + 3.66649825531622 NA intron (NM_023059, intron 1 of 9) intron (NM_023059, intron 1 of 9) 4337 NM_023059 24058 Mm.38017 NM_023059 ENSMUSG00000025494 Sigirr AI256711|TIR8 single immunoglobulin and toll-interleukin 1 receptor (TIR) domain protein-coding common_peak2_116_1077_-0.257063496991361_9.94560971425683_3.66577399498277 chr4 119292611 119295368 + 3.66577399498277 NA intron (NM_011732, intron 1 of 7) CpG-10232 524 NM_011732 22608 Mm.258204 NM_011732 ENSMUSG00000028639 Ybx1 1700102N10Rik|C79409|EF1A|MSY1|Nsep1|YB-1|dbpB|mYB-1a Y box protein 1 protein-coding common_peak2_60_526_-0.377139700590241_8.85308930134209_3.66542669779159 chr14 120985235 120987228 + 3.66542669779159 NA Intergenic B3A|SINE|B2 -49343 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding common_peak1_227_1801_0.182340046109349_10.9065533188682_3.66472334462216 chr15 11994751 11996100 + 3.66472334462216 NA intron (NM_011294, intron 1 of 4) CpG 582 NM_011294 20024 Mm.41746 NM_011294 ENSMUSG00000022205 Sub1 AI842364|P15|P9|Pc4|Rpo2tc1 SUB1 homolog (S. cerevisiae) protein-coding common_peak1_530_5353_0.107394013707616_12.4400984304946_3.66465450536285 chr8 70696579 70700636 + 3.66465450536285 NA 5' UTR (NM_010592, exon 1 of 1) 5' UTR (NM_010592, exon 1 of 1) 868 NM_001286944 16478 Mm.419851 NM_010592 ENSMUSG00000071076 Jund Jund1 jun D proto-oncogene protein-coding common_peak1_38_327_-0.484608555010223_8.11524772711297_3.66431815233793 chr19 46761516 46762179 + 3.66431815233793 NA exon (NM_033569, exon 1 of 8) exon (NM_033569, exon 1 of 8) 238 NM_001102471 94219 Mm.306903 NM_033569 ENSMUSG00000064105 Cnnm2 AU015877|AW048635|Acdp2|Clp2 cyclin M2 protein-coding common_peak1_106_974_-0.270287989281199_9.79411441399637_3.66376490759053 chr17 57188065 57189770 + 3.66376490759053 NA TTS (NM_019418) TTS (NM_019418) 5264 NM_019418 50930 Mm.483369 NM_019418 ENSMUSG00000005824 Tnfsf14 HVEM-L|HVEML|LIGHT|LTg|Ly113|Tnlg1d tumor necrosis factor (ligand) superfamily, member 14 protein-coding common_peak1_72_639_-0.339609068501733_9.1521235606365_3.66330267116517 chr11 58953520 58954560 + 3.66330267116517 NA promoter-TSS (NM_178218) promoter-TSS (NM_178218) 472 NM_206882 common_peak1_141_1340_-0.229321664871101_10.2744326894689_3.66278771536492 chr2 166624683 166626577 + 3.66278771536492 NA intron (NM_177782, intron 5 of 39) intron (NM_177782, intron 5 of 39) -47088 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA unique_peak2_17_152_-0.752702480819985_6.88103660228266_3.66198652644647-2 chr3 146654833 146655843 + 3.66198652644647 NA Intergenic Intergenic -4021 NM_029144 75015 Mm.250432 NM_029144 ENSMUSG00000048652 4930503B20Rik 1700013A07Rik|1700095G21Rik|4930483N21Rik|Gm1652|Samd13 RIKEN cDNA 4930503B20 gene protein-coding unique_peak2_17_152_-0.752702480819985_6.88103660228266_3.66198652644647 chr17 7896747 7897922 + 3.66198652644647 NA Intergenic Intergenic -28666 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding unique_peak2_17_152_-0.752702480819985_6.88103660228266_3.66198652644647-3 chr4 62286194 62287079 + 3.66198652644647 NA intron (NM_025286, intron 1 of 3) CpG 207 NM_025286 20530 Mm.292539 NM_025286 ENSMUSG00000066152 Slc31a2 AI604396|CTR2 solute carrier family 31, member 2 protein-coding unique_peak1_14_33_1.09458128016101_5.63475348133084_3.66131662274392-3 chr13 33029668 33030021 + 3.66131662274392 NA intron (NM_011452, intron 2 of 6) intron (NM_011452, intron 2 of 6) 2430 NM_011452 20706 Mm.45371 NM_011452 ENSMUSG00000021403 Serpinb9b 1600019A21Rik|R86|SPI-CI|Spi10|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9b protein-coding common_peak1_14_33_1.09458128016101_5.63475348133084_3.66131662274392 chr10 14059358 14059815 + 3.66131662274392 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 93207 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding unique_peak1_14_33_1.09458128016101_5.63475348133084_3.66131662274392-2 chr11 74552193 74552594 + 3.66131662274392 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 37765 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding unique_peak1_14_33_1.09458128016101_5.63475348133084_3.66131662274392 chr1 167240149 167240527 + 3.66131662274392 NA intron (NM_030724, intron 1 of 6) intron (NM_030724, intron 1 of 6) 44789 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding unique_peak1_14_33_1.09458128016101_5.63475348133084_3.66131662274392-4 chr17 52061777 52062187 + 3.66131662274392 NA Intergenic Intergenic 179255 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA common_peak1_74_658_-0.333984946718385_9.19714218164886_3.65934706883181 chr16 57121489 57122384 + 3.65934706883181 NA exon (NM_138599, exon 1 of 12) exon (NM_138599, exon 1 of 12) 222 NM_138599 28185 Mm.196933 NM_138599 ENSMUSG00000022752 Tomm70a 2610044B22Rik|D16Ium22|D16Ium22e|D16Wsu109e|Tom70|Tomm70|mKIAA0719 translocase of outer mitochondrial membrane 70 homolog A (yeast) protein-coding common_peak2_41_354_-0.46758825940719_8.23788108468845_3.65914534142743 chr6 50520952 50522187 + 3.65914534142743 NA Intergenic Intergenic 44905 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding common_peak2_90_814_-0.298311206398393_9.52150064591924_3.6590769277883 chr14 55105537 55107064 + 3.6590769277883 NA TTS (NM_177049) TTS (NM_177049) 293 NM_001303502 11766 Mm.238879 NM_007455 ENSMUSG00000040701 Ap1g2 Adtg2|G2ad adaptor protein complex AP-1, gamma 2 subunit protein-coding common_peak1_51_240_0.469144219597326_8.14746144602863_3.65883919620046 chr17 33718253 33718922 + 3.65883919620046 NA promoter-TSS (NM_001252480) promoter-TSS (NM_001252480) 90 NM_145486 224703 Mm.311439 NM_145486 ENSMUSG00000079557 March2 9530046H09Rik|MARCH-II membrane-associated ring finger (C3HC4) 2 protein-coding common_peak2_49_425_-0.422082116903097_8.52366856177429_3.65874757632683 chr6 54992048 54992892 + 3.65874757632683 NA intron (NM_026637, intron 1 of 3) intron (NM_026637, intron 1 of 3) 397 NM_026637 110175 Mm.294708 NM_026637 ENSMUSG00000002797 Ggct A030007L17Rik|AA673177|Gctg|Ggc gamma-glutamyl cyclotransferase protein-coding unique_peak2_6_67_-1.25412271360512_5.46040148444778_3.6584249276327 chr5 21002237 21002866 + 3.6584249276327 NA intron (NM_011203, intron 10 of 17) intron (NM_011203, intron 10 of 17) -50729 NM_001080977 242860 Mm.254286 NM_001080977 ENSMUSG00000039968 Rsbn1l 8430412F05Rik|AI447441|C330002G24Rik round spermatid basic protein 1-like protein-coding unique_peak1_13_29_1.15306184322305_5.48342151722004_3.6584249276327 chr1 51580735 51581147 + 3.6584249276327 NA Intergenic MLT1J1|LTR|ERVL-MaLR -102542 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding unique_peak1_13_29_1.15306184322305_5.48342151722004_3.6584249276327-2 chr13 119631620 119631957 + 3.6584249276327 NA intron (NM_020279, intron 1 of 2) CpG 7969 NM_020279 56838 Mm.143745 NM_020279 ENSMUSG00000074715 Ccl28 CCK1|MEC|Scya28 chemokine (C-C motif) ligand 28 protein-coding unique_peak1_13_29_1.15306184322305_5.48342151722004_3.6584249276327-3 chr3 84595258 84595659 + 3.6584249276327 NA 3' UTR (NM_207278, exon 1 of 1) 3' UTR (NM_207278, exon 1 of 1) 1884 NM_207278 403175 Mm.83086 NM_207278 ENSMUSG00000047819 Tigd4 C130063O11Rik|Gm418 tigger transposable element derived 4 protein-coding common_peak1_292_3082_-0.148525510914325_11.51585641865_3.65808416590353 chr13 41485592 41488274 + 3.65808416590353 NA intron (NM_001111324, intron 1 of 7) intron (NM_001111324, intron 1 of 7) 427 NM_001111324 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_47_213_0.498920792877305_7.9909273828398_3.65770711191145 chr11 89024468 89025230 + 3.65770711191145 NA Intergenic B2_Mm2|SINE|B2 25446 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding common_peak1_34_133_0.615356524065762_7.37376745249065_3.65713360129437-3 chr4 56222069 56222754 + 3.65713360129437 NA Intergenic Intergenic 519014 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Tact1 actin-like 7b protein-coding common_peak1_34_133_0.615356524065762_7.37376745249065_3.65713360129437 chr1 183221001 183221614 + 3.65713360129437 NA intron (NM_026866, intron 1 of 9) CpG 222 NM_001278218 68897 Mm.327216 NM_026866 ENSMUSG00000030768 Disp1 1190008H24Rik|DispA dispatched RND transporter family member 1 protein-coding common_peak1_34_133_0.615356524065762_7.37376745249065_3.65713360129437-2 chr17 34032643 34033247 + 3.65713360129437 NA exon (NM_011306, exon 2 of 10) exon (NM_011306, exon 2 of 10) 595 NM_001205215 20182 Mm.1243 NM_011306 ENSMUSG00000039656 Rxrb AL023085|H-2RIIBP|Nr2b2|RCoR-1|Rub retinoid X receptor beta protein-coding common_peak1_76_677_-0.328419922363278_9.24093150195471_3.65706001698626 chr12 25317769 25318970 + 3.65706001698626 NA Intergenic Intergenic 189195 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_62_544_-0.368503259712506_8.90586078980803_3.65575743133952 chr6 83830834 83831746 + 3.65575743133952 NA exon (NM_146169, exon 2 of 5) exon (NM_146169, exon 2 of 5) 451 NM_146169 232164 Mm.404420 NM_146169 ENSMUSG00000045896 Paip2b - poly(A) binding protein interacting protein 2B protein-coding common_peak1_81_725_-0.315770161743968_9.34594065712377_3.65515737599766 chr7 110018050 110019071 + 3.65515737599766 NA intron (NM_181517, intron 1 of 24) CpG 135 NM_181517 233726 Mm.222328 NM_181517 ENSMUSG00000066232 Ipo7 A330055O14Rik|C330016G14|Imp7|Ranbp7 importin 7 protein-coding common_peak1_55_479_-0.393713534404236_8.7100338284064_3.65492783620004 chr17 56990322 56990731 + 3.65492783620004 NA intron (NM_017393, intron 1 of 5) CpG 262 NM_017393 53895 Mm.287892 NM_017393 ENSMUSG00000002660 Clpp AU019820|D17Wsu160e caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding common_peak2_55_479_-0.393713534404236_8.7100338284064_3.65492783620004 chr11 109330234 109332121 + 3.65492783620004 NA Intergenic Intergenic -15690 NR_027883 67927 Mm.394490 NR_027883 ENSMUSG00000099630 1700096J18Rik - RIKEN cDNA 1700096J18 gene ncRNA common_peak1_235_1884_0.178402219258512_10.9695499177853_3.65477187810271 chr18 12127788 12129598 + 3.65477187810271 NA promoter-TSS (NM_024182) promoter-TSS (NM_024182) -157 NM_024182 66878 Mm.28551 NM_024182 ENSMUSG00000024404 Riok3 1200013N13Rik|D18Ertd331e|E130306C24Rik|Sudd RIO kinase 3 protein-coding common_peak1_23_200_-0.637276223086833_7.33241357963551_3.65451990497152-2 chr1 136685129 136685639 + 3.65451990497152 NA intron (NR_045325, intron 1 of 2) intron (NR_045325, intron 1 of 2) 1755 NR_045325 100503460 Mm.30630 NR_045324 ENSMUSG00000097113 Gm19705 - predicted gene, 19705 ncRNA common_peak1_23_200_-0.637276223086833_7.33241357963551_3.65451990497152-4 chr7 104446722 104447194 + 3.65451990497152 NA intron (NM_009099, intron 1 of 7) ORR1D1|LTR|ERVL-MaLR 18235 NM_009099 20128 Mm.295578 NM_009099 ENSMUSG00000030921 Trim30a Rpt-1|Rpt1|Trim30 tripartite motif-containing 30A protein-coding common_peak1_23_200_-0.637276223086833_7.33241357963551_3.65451990497152-3 chr11 49854769 49855304 + 3.65451990497152 NA intron (NM_001163671, intron 2 of 11) intron (NM_001163671, intron 2 of 11) 8285 NM_016961 26420 Mm.68933 NM_016961 ENSMUSG00000020366 Mapk9 AI851083|JNK2|Prkm9|p54aSAPK mitogen-activated protein kinase 9 protein-coding common_peak1_23_200_-0.637276223086833_7.33241357963551_3.65451990497152 chr1 66814529 66815019 + 3.65451990497152 NA intron (NM_001122738, intron 1 of 14) intron (NM_001122738, intron 1 of 14) 2821 NM_177645 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding common_peak1_23_200_-0.637276223086833_7.33241357963551_3.65451990497152-5 chr9 44175706 44176300 + 3.65451990497152 NA intron (NM_007619, intron 2 of 15) intron (NM_007619, intron 2 of 15) 41345 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding common_peak2_52_246_0.467374533858434_8.1820544985139_3.65435160194407 chr19 26747419 26748686 + 3.65435160194407 NA promoter-TSS (NM_026003) promoter-TSS (NM_026003) -351 NM_026003 67155 Mm.342988 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding common_peak2_98_592_0.309566169268161_9.36667137918008_3.65376420751272 chr6 90983380 90985075 + 3.65376420751272 NA Intergenic Intergenic 132599 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak1_125_821_0.265226887456455_9.81560802740991_3.65351795004047 chr3 89164102 89165614 + 3.65351795004047 NA promoter-TSS (NM_001163432) promoter-TSS (NM_001163432) 63 NM_001163432 12748 Mm.288098 NM_007712 ENSMUSG00000068917 Clk2 AU041688 CDC-like kinase 2 protein-coding common_peak1_285_2419_0.158011325606827_11.3197969949654_3.65222842852788 chr3 16183157 16184349 + 3.65222842852788 NA intron (NR_027375, intron 1 of 5) CpG 570 NM_001145919 229096 Mm.23834 NM_172677 ENSMUSG00000047213 Ythdf3 9130022A11Rik YTH domain family 3 protein-coding common_peak2_84_755_-0.31060057636858_9.40694213603678_3.65205278430599 chr11 107478927 107480350 + 3.65205278430599 NA exon (NM_025894, exon 1 of 11) exon (NM_025894, exon 1 of 11) 110 NM_025894 66997 Mm.491171 NM_025894 ENSMUSG00000020720 Psmd12 1500002F15Rik|AI480719|P55 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 protein-coding common_peak1_80_716_-0.319487225709025_9.32608569584739_3.65171030087745 chr1 54922553 54924139 + 3.65171030087745 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 3041 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_33_284_-0.524669536891578_7.89248334060632_3.65093171971935 chr2 148672516 148673312 + 3.65093171971935 NA intron (NM_019761, intron 1 of 1) intron (NM_019761, intron 1 of 1) 273 NM_001110159 56488 Mm.34663 NM_019761 ENSMUSG00000036992 Nxt1 1110001N02Rik NTF2-related export protein 1 protein-coding unique_peak2_33_284_-0.524669536891578_7.89248334060632_3.65093171971935 chr6 140353044 140354656 + 3.65093171971935 NA Intergenic Intergenic -70249 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak1_33_284_-0.524669536891578_7.89248334060632_3.65093171971935 chr9 98601174 98601693 + 3.65093171971935 NA intron (NM_025485, intron 1 of 7) CpG 246 NM_025485 64655 Mm.17949 NM_025485 ENSMUSG00000032459 Mrps22 3100002P07Rik|Rpms22 mitochondrial ribosomal protein S22 protein-coding common_peak1_67_352_0.393236510075702_8.66014262830903_3.64969743608873 chr9 105053002 105053960 + 3.64969743608873 NA exon (NM_053159, exon 1 of 10) exon (NM_053159, exon 1 of 10) 213 NM_053159 94062 Mm.29746 NM_053159 ENSMUSG00000032563 Mrpl3 2010320L16Rik|5930422H18Rik|AA407889 mitochondrial ribosomal protein L3 protein-coding common_peak2_181_1340_0.209863832001929_10.4940254379054_3.64804265810571 chr6 124413996 124416200 + 3.64804265810571 NA promoter-TSS (NM_008995) promoter-TSS (NM_008995) -31 NM_001277805 19305 Mm.22418 NM_008995 ENSMUSG00000005069 Pex5 AW212715|ESTM1|PTS1R|Pxr1|X83306 peroxisomal biogenesis factor 5 protein-coding common_peak1_68_359_0.390742223917121_8.68722420828824_3.64803602274198 chr6 127245652 127246672 + 3.64803602274198 NA Intergenic Intergenic 61805 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak1_263_2181_0.165721494896342_11.1742961337718_3.64706689093424 chr11 78176161 78178825 + 3.64706689093424 NA promoter-TSS (NM_001291235) promoter-TSS (NM_001291235) -656 NM_001291235 68385 Mm.390375 NM_026708 ENSMUSG00000019437 Tlcd1 - TLC domain containing 1 protein-coding common_peak1_56_488_-0.38919193540206_8.7390946872512_3.64641026271862 chr11 88204393 88205037 + 3.64641026271862 NA intron (NM_001291271, intron 1 of 4) intron (NM_001291271, intron 1 of 4) 327 NM_001291271 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding common_peak2_40_169_0.552052328927724_7.68541710060156_3.64637290779246 chr13 115100953 115102093 + 3.64637290779246 NA exon (NM_001033228, exon 1 of 29) exon (NM_001033228, exon 1 of 29) 441 NM_001033228 109700 Mm.317280 NM_001033228 ENSMUSG00000042284 Itga1 CD49A|E130012M19Rik|Vla1 integrin alpha 1 protein-coding common_peak2_42_362_-0.4580985677418_8.27477645412485_3.64621391822875 chr7 44929718 44930561 + 3.64621391822875 NA promoter-TSS (NM_007458) promoter-TSS (NM_007458) -649 NM_001077264 11771 Mm.6877 NM_007458 ENSMUSG00000060279 Ap2a1 Adtaa adaptor-related protein complex 2, alpha 1 subunit protein-coding common_peak1_209_1618_0.191305271560609_10.7565399060829_3.64564562624608 chr13 111488649 111490007 + 3.64564562624608 NA intron (NM_028487, intron 1 of 12) CpG 713 NM_028487 73274 Mm.57286 NM_028487 ENSMUSG00000032745 Gpbp1 1700034P14Rik|AU019836|D230035M11Rik|Gpbp|mGPBP GC-rich promoter binding protein 1 protein-coding common_peak1_226_2292_-0.173075892593062_11.0764826932843_3.64425000050318 chr11 72607255 72608718 + 3.64425000050318 NA intron (NM_025985, intron 1 of 5) CpG 725 NM_025985 67128 Mm.458052 NM_025985 ENSMUSG00000020794 Ube2g1 2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik ubiquitin-conjugating enzyme E2G 1 protein-coding common_peak1_22_69_0.809177787148544_6.53387191051924_3.64386921998341 chr1 87899176 87899722 + 3.64386921998341 NA intron (NM_177646, intron 3 of 29) intron (NM_177646, intron 3 of 29) 46162 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak1_22_69_0.809177787148544_6.53387191051924_3.64386921998341-2 chr11 107438801 107439331 + 3.64386921998341 NA intron (NM_145823, intron 1 of 9) B1F1|SINE|Alu 31654 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_22_69_0.809177787148544_6.53387191051924_3.64386921998341-3 chr2 154734123 154734589 + 3.64386921998341 NA Intergenic Intergenic -56754 NM_001139512 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding common_peak1_22_69_0.809177787148544_6.53387191051924_3.64386921998341-4 chrX 107090134 107090561 + 3.64386921998341 NA intron (NM_172435, intron 2 of 2) intron (NM_172435, intron 2 of 2) 1012 NM_172435 78826 Mm.74639 NM_172435 ENSMUSG00000050921 P2ry10 5830408N17Rik|Lypsr2|P2Y10 purinergic receptor P2Y, G-protein coupled 10 protein-coding common_peak2_116_743_0.277919154653114_9.67811838843459_3.64344908939319 chr13 74769508 74771853 + 3.64344908939319 NA promoter-TSS (NM_001301157) promoter-TSS (NM_001301157) 56 NM_001301156 12380 Mm.29163 NM_009817 ENSMUSG00000021585 Cast - calpastatin protein-coding common_peak2_37_151_0.579049001139661_7.53745201401342_3.64185664228508 chr15 36938183 36939224 + 3.64185664228508 NA Intergenic CpG 68699 NM_026521 68036 Mm.371631 NM_026521 ENSMUSG00000062397 Zfp706 3110006P09Rik|AA793007|AW536850|C77232|Znf706 zinc finger protein 706 protein-coding common_peak1_37_151_0.579049001139661_7.53745201401342_3.64185664228508 chr14 25636655 25637257 + 3.64185664228508 NA intron (NM_001310666, intron 7 of 23) intron (NM_001310666, intron 7 of 23) 33443 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak1_37_151_0.579049001139661_7.53745201401342_3.64185664228508-2 chr6 116337998 116338478 + 3.64185664228508 NA 5' UTR (NM_027920, exon 1 of 7) 5' UTR (NM_027920, exon 1 of 7) 216 NM_027920 71779 Mm.27064 NM_027920 ENSMUSG00000025702 March8 1300017E09Rik|MARCH-VIII|Mir membrane-associated ring finger (C3HC4) 8 protein-coding common_peak2_196_1946_-0.187930552094995_10.8330718926728_3.64042943244774 chr10 78159129 78162235 + 3.64042943244774 NA Intergenic Intergenic 9086 NM_138601 28295 Mm.268691 NM_138601 ENSMUSG00000053329 D10Jhu81e C21orf33|ES1 DNA segment, Chr 10, Johns Hopkins University 81 expressed protein-coding common_peak2_196_1946_-0.187930552094995_10.8330718926728_3.64042943244774-2 chr19 46696460 46699948 + 3.64042943244774 NA intron (NM_025563, intron 1 of 4) intron (NM_025563, intron 1 of 4) 8298 NM_025563 66439 Mm.87163 NM_025563 ENSMUSG00000062376 Borcs7 2010012O05Rik|4930569L17Rik|AI413851|AI467257 BLOC-1 related complex subunit 7 protein-coding common_peak1_94_560_0.316612829666418_9.290163375442_3.64024130052033 chr6 47739771 47740861 + 3.64024130052033 NA Intergenic CpG 3915 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_16_144_-0.776372829040763_6.79172267549455_3.63938109431217-2 chr7 114301418 114301851 + 3.63938109431217 NA Intergenic L4_A_Mam|LINE|RTE-X -25518 NM_011965 26440 Mm.121265 NM_011965 ENSMUSG00000030751 Psma1 C2|HC2|Pros-30|alpha-type proteasome (prosome, macropain) subunit, alpha type 1 protein-coding common_peak1_16_144_-0.776372829040763_6.79172267549455_3.63938109431217 chr5 111509302 111509749 + 3.63938109431217 NA Intergenic Intergenic -72036 NR_015546 330164 Mm.193276 NM_177875 ENSMUSG00000052848 C130026L21Rik - RIKEN cDNA C130026L21 gene ncRNA common_peak1_191_1438_0.202761524910866_10.5922316391957_3.63918808052376 chr11 87442190 87443867 + 3.63918808052376 NA intron (NM_031386, intron 2 of 30) CpG 15437 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_71_381_0.380481156209632_8.76766940614056_3.63872215595862 chr5 92353374 92354346 + 3.63872215595862 NA intron (NM_001310664, intron 2 of 10) intron (NM_001310664, intron 2 of 10) -4971 NM_021274 15945 Mm.877 NM_021274 ENSMUSG00000034855 Cxcl10 C7|CRG-2|INP10|IP-10|IP10|Ifi10|Scyb10|gIP-10|mob-1 chemokine (C-X-C motif) ligand 10 protein-coding common_peak2_135_910_0.25206595073119_9.95734021916765_3.63871874231572 chr6 13068994 13070723 + 3.63871874231572 NA promoter-TSS (NM_027992) promoter-TSS (NM_027992) 99 NM_027992 71900 Mm.27742 NM_027992 ENSMUSG00000029571 Tmem106b 2310036D22Rik|5830455K21Rik|6430519M21Rik|AI428776|AI661344 transmembrane protein 106B protein-coding unique_peak2_20_176_-0.6901309062845_7.12254009694075_3.63834818335148-2 chr2 170173555 170174765 + 3.63834818335148 NA Intergenic Intergenic -31485 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding unique_peak2_20_176_-0.6901309062845_7.12254009694075_3.63834818335148 chr2 168200446 168201843 + 3.63834818335148 NA intron (NR_132310, intron 9 of 11) intron (NR_132310, intron 9 of 11) 5968 NM_009628 11538 Mm.201322 NM_009628 ENSMUSG00000051149 Adnp AA589558|mKIAA0784 activity-dependent neuroprotective protein protein-coding unique_peak2_20_176_-0.6901309062845_7.12254009694075_3.63834818335148-3 chr4 116700589 116701841 + 3.63834818335148 NA Intergenic RSINE1|SINE|B4 7170 NM_025962 67096 Mm.252785 NM_025962 ENSMUSG00000028690 Mmachc 1810037K07Rik|CblC methylmalonic aciduria cblC type, with homocystinuria protein-coding common_peak1_46_398_-0.437113848796328_8.42168801182418_3.63764280370681 chr4 126257163 126258013 + 3.63764280370681 NA Intergenic Intergenic -1269 NM_001145970 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding common_peak1_59_295_0.425815378155111_8.4223610547065_3.63764280370681 chr2 33886895 33888179 + 3.63764280370681 NA 5' UTR (NM_175184, exon 1 of 10) 5' UTR (NM_175184, exon 1 of 10) 409 NM_175184 72543 Mm.254914 NM_175184 ENSMUSG00000038740 Mvb12b 2610200O14Rik|2610528K11Rik|AI414895|Fam125b multivesicular body subunit 12B protein-coding common_peak1_31_267_-0.543223616146248_7.79447738238465_3.63692387125559 chr4 134737201 134737885 + 3.63692387125559 NA Intergenic Intergenic 30461 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak1_66_581_-0.354331642758559_9.007709521529_3.63691729737086 chr11 17000463 17001656 + 3.63691729737086 NA intron (NM_019549, intron 1 of 9) RMER19C|LTR|ERVK 7659 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding common_peak1_44_194_0.518848323815021_7.86675447565712_3.63600669553983 chr12 36136104 36136536 + 3.63600669553983 NA intron (NM_025840, intron 1 of 11) intron (NM_025840, intron 1 of 11) 20505 NM_025840 66912 Mm.288669 NM_025840 ENSMUSG00000020547 Bzw2 1110001I24Rik|Bdm2|HSPC028 basic leucine zipper and W2 domains 2 protein-coding common_peak2_48_220_0.488973677519253_8.03238939815106_3.63583167866576 chr1 80213116 80214653 + 3.63583167866576 NA promoter-TSS (NM_173425) promoter-TSS (NM_173425) 60 NM_173425 241128 Mm.145511 NM_173425 ENSMUSG00000043230 Fam124b A830043J08Rik family with sequence similarity 124, member B protein-coding common_peak1_48_220_0.488973677519253_8.03238939815106_3.63583167866576 chr9 45299514 45300213 + 3.63583167866576 NA Intergenic B3|SINE|B2 -19237 NM_001013373 214531 Mm.394987 NM_001013373 ENSMUSG00000037129 Tmprss13 BC010843|Tpmrss13 transmembrane protease, serine 13 protein-coding common_peak2_194_1468_0.2004303559299_10.6208338585212_3.63387372762945 chr4 148557701 148559704 + 3.63387372762945 NA intron (NM_016699, intron 1 of 24) CpG 275 NR_131061 50912 Mm.266635 NM_016699 ENSMUSG00000017264 Exosc10 PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4 exosome component 10 protein-coding common_peak2_145_1001_0.240264544376778_10.0887990653836_3.63309844977945 chr11 75965641 75967496 + 3.63309844977945 NA Intergenic CpG -33344 NM_198637 74230 Mm.271247 NM_198637 ENSMUSG00000053783 1700016K19Rik Liat1 RIKEN cDNA 1700016K19 gene protein-coding common_peak2_156_1501_-0.215193463108623_10.44507236596_3.63307534640441 chr19 23321683 23324586 + 3.63307534640441 NA intron (NM_174857, intron 11 of 13) intron (NM_174857, intron 11 of 13) -49237 NM_001252684 226026 Mm.23267 NM_153808 ENSMUSG00000024943 Smc5 MLZ-453|SMC-5|Smc5l1|mKIAA0594|mSMC5 structural maintenance of chromosomes 5 protein-coding common_peak1_51_443_-0.412382310522817_8.5882247110887_3.63237565014943 chr1 43561950 43562981 + 3.63237565014943 NA intron (NM_010879, intron 4 of 4) intron (NM_010879, intron 4 of 4) 116714 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_51_443_-0.412382310522817_8.5882247110887_3.63237565014943-3 chr9 41117532 41118422 + 3.63237565014943 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) 39517 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak1_51_443_-0.412382310522817_8.5882247110887_3.63237565014943-2 chr11 53892715 53893703 + 3.63237565014943 NA Intergenic MTEa|LTR|ERVL-MaLR -1506 NM_011396 20520 Mm.42253 NM_011396 ENSMUSG00000018900 Slc22a5 Lstpl|Octn2|jvs solute carrier family 22 (organic cation transporter), member 5 protein-coding common_peak2_130_1222_-0.239121426680514_10.1366479751871_3.6318293508196 chr14 48445970 48447405 + 3.6318293508196 NA intron (NM_172600, intron 1 of 15) CpG 335 NR_132324 218989 Mm.85211 NM_172600 ENSMUSG00000036339 Tmem260 5930435P15|6720456H20Rik transmembrane protein 260 protein-coding common_peak2_72_389_0.374988712636018_8.79482467006762_3.63181594382459 chr7 68748335 68749342 + 3.63181594382459 NA exon (NM_001042592, exon 1 of 8) exon (NM_001042592, exon 1 of 8) 400 NM_001042592 66412 Mm.251199 NM_025549 ENSMUSG00000042659 Arrdc4 2410003C09Rik|AV216361 arrestin domain containing 4 protein-coding common_peak2_32_122_0.63480544232164_7.25991722650006_3.63131347308703 chr14 121358953 121360077 + 3.63131347308703 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 19715 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_366_4009_-0.129291788395461_11.9047406271446_3.63075853540638 chr5 140615878 140619123 + 3.63075853540638 NA Intergenic B1_Mus1|SINE|Alu 10159 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak2_60_302_0.421345467574021_8.45384671725996_3.63038688680633 chr5 125433474 125434647 + 3.63038688680633 NA promoter-TSS (NM_203319) promoter-TSS (NM_203319) -12 NM_203319 208144 Mm.296385 NM_203319 ENSMUSG00000029480 Dhx37 Gm1050|Gm451|mKIAA1517 DEAH (Asp-Glu-Ala-His) box polypeptide 37 protein-coding unique_peak2_29_250_-0.562887121353069_7.69009999327424_3.63024500973387 chr7 58730423 58732000 + 3.63024500973387 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 73009 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak2_29_250_-0.562887121353069_7.69009999327424_3.63024500973387-2 chrX 105069568 105070701 + 3.63024500973387 NA promoter-TSS (NR_015467) promoter-TSS (NR_015467) -10 NR_015467 71445 Mm.242968 NR_015467 ENSMUSG00000087174 5530601H04Rik AI835882 RIKEN cDNA 5530601H04 gene ncRNA common_peak2_146_1393_-0.224004092804455_10.3330127994662_3.62833905852644 chr6 35252086 35254143 + 3.62833905852644 NA intron (NR_027875, intron 1 of 2) intron (NR_027875, intron 1 of 2) 382 NR_027875 67705 Mm.228046 NR_015608 ENSMUSG00000073155 1810058I24Rik AI414869|AI848234 RIKEN cDNA 1810058I24 gene ncRNA common_peak1_25_217_-0.612763080135994_7.46180278470893_3.62774376110861 chr1 131183626 131184071 + 3.62774376110861 NA intron (NM_018750, intron 2 of 5) intron (NM_018750, intron 2 of 5) 16337 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak2_87_504_0.332882787427506_9.14658097135291_3.62741044995968 chr16 57230646 57231670 + 3.62741044995968 NA intron (NM_026254, intron 1 of 17) intron (NM_026254, intron 1 of 17) 308 NM_026254 67581 Mm.257819 NM_026254 ENSMUSG00000022749 Tbc1d23 4930451A13Rik|AU015720|AU043671|AU043778|D030022P07Rik|W51689 TBC1 domain family, member 23 protein-coding common_peak2_74_404_0.368371610517679_8.84596390303083_3.62737720649492 chr19 46717286 46719312 + 3.62737720649492 NA intron (NM_020577, intron 7 of 10) RMER6C|LTR|ERVK 10856 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak2_488_4821_0.112563024472127_12.2916974478386_3.62734120733048 chr19 57113560 57121437 + 3.62734120733048 NA intron (NM_001290813, intron 6 of 20) intron (NM_001290813, intron 6 of 20) 1526 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_76_419_0.362476023106943_8.89548352921959_3.62505748803625-3 chr8 69208388 69209746 + 3.62505748803625 NA promoter-TSS (NM_001013379) promoter-TSS (NM_001013379) 21 NM_001013379 234358 Mm.334577 NM_001013379 ENSMUSG00000059897 Zfp930 - zinc finger protein 930 protein-coding common_peak2_76_419_0.362476023106943_8.89548352921959_3.62505748803625-2 chr4 156196932 156198400 + 3.62505748803625 NA promoter-TSS (NM_021604) promoter-TSS (NM_021604) -178 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak2_76_419_0.362476023106943_8.89548352921959_3.62505748803625 chr4 48124460 48125643 + 3.62505748803625 NA intron (NM_026343, intron 1 of 7) CpG 132 NM_026343 67727 Mm.171334 NM_026343 ENSMUSG00000061455 Stx17 4833418L03Rik|6330411F21Rik|9030425C21Rik|AW048351 syntaxin 17 protein-coding common_peak1_94_853_-0.289622469345279_9.59328102494785_3.62470803508343 chr10 82622314 82623532 + 3.62470803508343 NA intron (NM_001135569, intron 1 of 2) CpG-1394 305 NM_001135569 544717 Mm.334867 NM_001135567 ENSMUSG00000063320 1190007I07Rik - RIKEN cDNA 1190007I07 gene protein-coding common_peak1_58_507_-0.38315828173034_8.79710554590699_3.62434681804057 chr6 147475801 147476575 + 3.62434681804057 NA intron (NM_025911, intron 1 of 12) CpG 317 NM_025911 67015 Mm.209774 NM_025911 ENSMUSG00000030301 Ccdc91 1700086G08Rik|1810060J02Rik|AU045683|AW555238|p56 coiled-coil domain containing 91 protein-coding common_peak1_43_371_-0.452748757227724_8.31278443249417_3.62412398181303 chr9 44267739 44268494 + 3.62412398181303 NA promoter-TSS (NM_001163743) promoter-TSS (NM_001163743) 71 NM_001163743 270151 Mm.3957 NM_178420 ENSMUSG00000032109 Nlrx1 BC034204|NOD9 NLR family member X1 protein-coding common_peak2_61_309_0.417170110646424_8.48470946059745_3.62403928310245 chr2 33886711 33888150 + 3.62403928310245 NA 5' UTR (NM_175184, exon 1 of 10) 5' UTR (NM_175184, exon 1 of 10) 516 NM_175184 72543 Mm.254914 NM_175184 ENSMUSG00000038740 Mvb12b 2610200O14Rik|2610528K11Rik|AI414895|Fam125b multivesicular body subunit 12B protein-coding common_peak2_305_2642_0.150456894825526_11.4431891570543_3.62300165257566 chr6 119478359 119481770 + 3.62300165257566 NA exon (NM_133940, exon 1 of 1) exon (NM_133940, exon 1 of 1) 396 NM_133940 101358 Mm.125477 NM_133940 ENSMUSG00000030019 Fbxl14 AW322056|Fbx14l F-box and leucine-rich repeat protein 14 protein-coding common_peak2_162_1159_0.223935353906436_10.2918767669682_3.62258918509971 chr2 3741709 3744854 + 3.62258918509971 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 29823 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_82_465_0.345319724514068_9.03684600691131_3.62254730233928 chr17 7870323 7873017 + 3.62254730233928 NA Intergenic Intergenic -54330 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding common_peak2_82_465_0.345319724514068_9.03684600691131_3.62254730233928-2 chr2 119662182 119663568 + 3.62254730233928 NA promoter-TSS (NM_027175) promoter-TSS (NM_027175) -77 NM_027175 69702 Mm.5390 NM_027175 ENSMUSG00000027305 Ndufaf1 2410001M24Rik|CGI-65|CIA30 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 protein-coding common_peak1_82_465_0.345319724514068_9.03684600691131_3.62254730233928 chr19 28963718 28965003 + 3.62254730233928 NA promoter-TSS (NM_198651) promoter-TSS (NM_198651) -206 NM_198651 381218 Mm.280653 NM_198651 ENSMUSG00000064202 4430402I18Rik AW122618|Spata6l RIKEN cDNA 4430402I18 gene protein-coding unique_peak1_18_50_0.927938861425395_6.13639477268419_3.62214959091406 chr10 62320462 62320867 + 3.62214959091406 NA intron (NM_010438, intron 4 of 21) intron (NM_010438, intron 4 of 21) 19757 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak1_18_50_0.927938861425395_6.13639477268419_3.62214959091406-3 chr5 113944813 113945404 + 3.62214959091406 NA intron (NM_198109, intron 14 of 14) intron (NM_198109, intron 14 of 14) -36402 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_18_50_0.927938861425395_6.13639477268419_3.62214959091406-2 chr5 92498674 92499191 + 3.62214959091406 NA intron (NM_007644, intron 1 of 11) intron (NM_007644, intron 1 of 11) 6725 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding common_peak1_18_50_0.927938861425395_6.13639477268419_3.62214959091406-4 chr8 117345729 117346189 + 3.62214959091406 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -3211 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_18_50_0.927938861425395_6.13639477268419_3.62214959091406 chr16 29865309 29865760 + 3.62214959091406 NA Intergenic Intergenic 113590 NR_037689 328657 Mm.425982 NM_001033403 Gm1968 - predicted gene 1968 ncRNA common_peak2_24_79_0.764087097249021_6.70397164351187_3.62204193185932 chr11 76201994 76202643 + 3.62204193185932 NA intron (NM_027773, intron 1 of 4) CpG 262 NM_027773 116972 Mm.188413 NM_027773 ENSMUSG00000069808 Fam57a 2310047D13Rik|4932415L08Rik|5430402E13Rik|5430420K21Rik|Wdt3 family with sequence similarity 57, member A protein-coding common_peak1_24_79_0.764087097249021_6.70397164351187_3.62204193185932-2 chr8 14089764 14090326 + 3.62204193185932 NA intron (NM_001034862, intron 1 of 5) intron (NM_001034862, intron 1 of 5) 282 NM_001034862 234086 Mm.268896 NM_001034862 ENSMUSG00000051978 Erich1 - glutamate rich 1 protein-coding common_peak1_15_136_-0.801778819835358_6.69714267304285_3.62204193185932 chr2 173794344 173794747 + 3.62204193185932 NA Intergenic Intergenic 56974 NM_019806 56491 Mm.260456 NM_019806 ENSMUSG00000054455 Vapb AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b vesicle-associated membrane protein, associated protein B and C protein-coding common_peak2_24_79_0.764087097249021_6.70397164351187_3.62204193185932-2 chr5 140578486 140579286 + 3.62204193185932 NA Intergenic Intergenic -13819 NM_030022 77998 Mm.160040 NM_030022 ENSMUSG00000036586 Grifin E130101O17Rik galectin-related inter-fiber protein protein-coding common_peak1_24_79_0.764087097249021_6.70397164351187_3.62204193185932 chr1 170589253 170589862 + 3.62204193185932 NA 5' UTR (NM_001109985, exon 1 of 10) 5' UTR (NM_001109985, exon 1 of 10) 292 NM_001109985 70729 Mm.487078 NM_027528 ENSMUSG00000038473 Nos1ap 6330408P19Rik|Capon nitric oxide synthase 1 (neuronal) adaptor protein protein-coding common_peak1_15_136_-0.801778819835358_6.69714267304285_3.62204193185932-2 chr4 107066942 107067399 + 3.62204193185932 NA promoter-TSS (NM_025500) promoter-TSS (NM_025500) -304 NM_025500 56280 Mm.29517 NM_025500 ENSMUSG00000028622 Mrpl37 2300004O14Rik|AI132596|MRP-L2|Rpml2 mitochondrial ribosomal protein L37 protein-coding unique_peak2_35_139_0.602014656114057_7.43029034500199_3.62202034643165 chr8 71788815 71789722 + 3.62202034643165 NA Intergenic Intergenic -63587 NM_028715 74015 Mm.22025 NM_028715 ENSMUSG00000070000 Fcho1 3322402E17Rik|N28152 FCH domain only 1 protein-coding common_peak2_35_139_0.602014656114057_7.43029034500199_3.62202034643165 chr13 20142604 20143474 + 3.62202034643165 NA intron (NM_080288, intron 1 of 21) intron (NM_080288, intron 1 of 21) 52532 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding common_peak1_26_89_0.73035447050992_6.85703033158464_3.62131776906765-2 chr4 70410093 70410548 + 3.62131776906765 NA 5' UTR (NM_145990, exon 1 of 37) 5' UTR (NM_145990, exon 1 of 37) 115 NM_001313762 214444 Mm.370777 NM_145990 ENSMUSG00000039298 Cdk5rap2 2900018K03Rik|an|mKIAA1633 CDK5 regulatory subunit associated protein 2 protein-coding common_peak1_26_89_0.73035447050992_6.85703033158464_3.62131776906765 chr19 17355175 17355786 + 3.62131776906765 NA intron (NM_010265, intron 1 of 2) intron (NM_010265, intron 1 of 2) 1187 NM_173442 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak2_134_1264_-0.234608515863757_10.1876174116498_3.62090158081088 chr18 14655511 14658486 + 3.62090158081088 NA intron (NM_001161371, intron 3 of 8) intron (NM_001161371, intron 3 of 8) 25916 NM_001161369 268996 Mm.31761 NM_009280 ENSMUSG00000037013 Ss18 D130059H17|Ssxt|Syt SS18, nBAF chromatin remodeling complex subunit protein-coding common_peak2_105_963_-0.270535259600493_9.77762170642971_3.62047054644187 chr7 141466714 141468680 + 3.62047054644187 NA intron (NM_009842, intron 1 of 7) CpG 335 NM_001111049 12476 Mm.30246 NM_009842 ENSMUSG00000025510 Cd151 PETA-3|SFA-1|Tspan24 CD151 antigen protein-coding common_peak1_40_344_-0.469009286600106_8.19594790836548_3.62012593084185 chr6 129589125 129589956 + 3.62012593084185 NA Intergenic Intergenic -2271 NM_010654 16643 Mm.391515 NM_010654 ENSMUSG00000030165 Klrd1 CD94 killer cell lectin-like receptor, subfamily D, member 1 protein-coding common_peak2_481_4734_0.113315096085257_12.2658062583984_3.61867032626772 chr7 81858120 81865392 + 3.61867032626772 NA promoter-TSS (NM_001291282) promoter-TSS (NM_001291282) -931 NM_001291282 107769 Mm.221412 NM_145375 ENSMUSG00000038623 Tm6sf1 AI428514|BC023123|C630016D09Rik transmembrane 6 superfamily member 1 protein-coding common_peak1_101_617_0.302820060409438_9.42287305810909_3.61790532908335 chr8 84068147 84069790 + 3.61790532908335 NA intron (NM_009055, intron 1 of 20) intron (NM_009055, intron 1 of 20) 2132 NM_009055 19724 Mm.7892 NM_009055 ENSMUSG00000031706 Rfx1 AI047719|AI385641 regulatory factor X, 1 (influences HLA class II expression) protein-coding common_peak1_101_617_0.302820060409438_9.42287305810909_3.61790532908335-2 chr8 120746356 120748076 + 3.61790532908335 NA exon (NM_001301811, exon 5 of 9) exon (NM_001301811, exon 5 of 9) 8577 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_284_2410_0.157188370825969_11.3140101210155_3.61764164804636 chr11 116422728 116425275 + 3.61764164804636 NA Intergenic Intergenic -10093 NM_176902 319370 Mm.258466 NM_176902 ENSMUSG00000050628 Ubald2 1110014K08Rik|D030012E24Rik|Fam100b UBA-like domain containing 2 protein-coding common_peak1_126_831_0.261770976032953_9.83132520615757_3.61675571811185 chr4 132211015 132212168 + 3.61675571811185 NA intron (NM_145393, intron 1 of 4) CpG-10406 665 NM_145393 213541 Mm.23998 NM_145393 ENSMUSG00000040025 Ythdf2 9430020E02Rik|HGRG8|NY-REN-2 YTH domain family 2 protein-coding common_peak1_37_318_-0.490436099181623_8.07219456417406_3.61597762965234 chr3 115815010 115815672 + 3.61597762965234 NA Intergenic Intergenic 72718 NR_027894 68161 Mm.392043 NR_015487 ENSMUSG00000054426 A930005H10Rik - RIKEN cDNA A930005H10 gene ncRNA common_peak1_38_157_0.569162701430757_7.58836209889248_3.6154022207198-3 chr6 108442582 108443384 + 3.6154022207198 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -46760 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_38_157_0.569162701430757_7.58836209889248_3.6154022207198 chr1 97632324 97633156 + 3.6154022207198 NA Intergenic B4|SINE|B4 29278 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak1_38_157_0.569162701430757_7.58836209889248_3.6154022207198-2 chr6 50430515 50431298 + 3.6154022207198 NA intron (NM_001163645, intron 1 of 21) intron (NM_001163645, intron 1 of 21) 25264 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_38_157_0.569162701430757_7.58836209889248_3.6154022207198 chr8 84968971 84970201 + 3.6154022207198 NA promoter-TSS (NM_011563) promoter-TSS (NM_011563) -62 NM_011563 21672 Mm.347009 NM_011563 ENSMUSG00000005161 Prdx2 AL022839|Band-8|NkefB|PRP|PrxII|TDX1|TPx|TPx-B|TR|TSA|Tdpx1|Torin peroxiredoxin 2 protein-coding common_peak1_216_2174_-0.176581371623676_10.9985089998116_3.61487414291945 chr7 81858951 81860791 + 3.61487414291945 NA intron (NR_111910, intron 1 of 7) intron (NR_111910, intron 1 of 7) 870 NM_145375 107769 Mm.221412 NM_145375 ENSMUSG00000038623 Tm6sf1 AI428514|BC023123|C630016D09Rik transmembrane 6 superfamily member 1 protein-coding common_peak1_12_112_-0.891370028960611_6.37449394793488_3.6147818789682 chr14 75754736 75755026 + 3.6147818789682 NA promoter-TSS (NM_177381) promoter-TSS (NM_177381) -388 NM_177381 338337 Mm.86507 NM_177381 ENSMUSG00000034893 Cog3 E430004N23 component of oligomeric golgi complex 3 protein-coding common_peak1_30_111_0.659327282676703_7.13701856339596_3.61475106359085 chr1 21326495 21327076 + 3.61475106359085 NA Intergenic LTRIS_Mus|LTR|ERV1 -22892 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_30_111_0.659327282676703_7.13701856339596_3.61475106359085-2 chr6 108167230 108167964 + 3.61475106359085 NA intron (NM_145937, intron 3 of 8) intron (NM_145937, intron 3 of 8) 17986 NM_145937 58911 Mm.439876 NM_145937 ENSMUSG00000030101 Sumf1 AA543204|AI463102|AI851573|FGE sulfatase modifying factor 1 protein-coding common_peak2_30_111_0.659327282676703_7.13701856339596_3.61475106359085 chr10 17683520 17684521 + 3.61475106359085 NA Intergenic Intergenic -39208 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak1_55_267_0.447087870746509_8.28963312583103_3.61419609178749 chr8 84638549 84639407 + 3.61419609178749 NA intron (NM_001252061, intron 46 of 46) intron (NM_001252061, intron 46 of 46) 23874 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding common_peak2_44_379_-0.443676970766315_8.34801712294779_3.61396243581407 chr4 149737196 149738189 + 3.61396243581407 NA promoter-TSS (NM_001284273) promoter-TSS (NM_001284273) 78 NM_001284273 230917 Mm.266704 NM_177672 ENSMUSG00000044700 Tmem201 AV028368|D4Ertd429e|Net5|Samp1 transmembrane protein 201 protein-coding common_peak1_44_379_-0.443676970766315_8.34801712294779_3.61396243581407 chr13 43242741 43243465 + 3.61396243581407 NA intron (NM_001033399, intron 1 of 1) ZP3AR|Satellite|Satellite 61069 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak1_188_1409_0.204264228818911_10.5636115616956_3.61328010933255-2 chr7 126776841 126777837 + 3.61328010933255 NA intron (NM_026875, intron 1 of 4) intron (NM_026875, intron 1 of 4) 364 NM_025347 66090 Mm.27114 NM_025347 ENSMUSG00000042675 Ypel3 0610043B10Rik|1190001G19Rik|Suap yippee-like 3 (Drosophila) protein-coding common_peak1_188_1409_0.204264228818911_10.5636115616956_3.61328010933255 chr7 100607516 100608843 + 3.61328010933255 NA promoter-TSS (NR_003559) promoter-TSS (NR_003559) -183 NR_003559 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e mitochondrial ribosomal protein L48 protein-coding common_peak1_100_609_0.304182761155209_9.40475681302785_3.61321186299946 chr2 173046068 173047415 + 3.61321186299946 NA Intergenic Intergenic 24839 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak1_60_525_-0.37439953824533_8.85171922016964_3.6130068856686 chr16 20535423 20536202 + 3.6130068856686 NA intron (NM_001302970, intron 1 of 10) CpG 332 NM_009679 11773 Mm.18946 NM_009679 ENSMUSG00000022841 Ap2m1 - adaptor-related protein complex 2, mu 1 subunit protein-coding common_peak1_60_525_-0.37439953824533_8.85171922016964_3.6130068856686-2 chr4 155847364 155848309 + 3.6130068856686 NA exon (NM_010091, exon 1 of 15) exon (NM_010091, exon 1 of 15) 519 NM_010091 13542 Mm.3400 NM_010091 ENSMUSG00000029071 Dvl1 Dvl|mKIAA4029 dishevelled segment polarity protein 1 protein-coding common_peak2_166_1610_-0.206994173018609_10.5502436921973_3.61203869154602 chr3 60411412 60415299 + 3.61203869154602 NA Intergenic Lx5c|LINE|L1 -59475 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_103_943_-0.273997182348197_9.74564445818774_3.61148742333147 chr11 67530016 67533580 + 3.61148742333147 NA Intergenic Intergenic -1200 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding unique_peak2_14_128_-0.829183134011906_6.5966356884173_3.61109648632639 chr2 117432582 117433655 + 3.61109648632639 NA Intergenic Intergenic -90241 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_14_128_-0.829183134011906_6.5966356884173_3.61109648632639 chr2 181694048 181694373 + 3.61109648632639 NA promoter-TSS (NM_001291210) promoter-TSS (NM_001291210) -233 NM_001291209 56470 Mm.274366 NM_026446 ENSMUSG00000002458 Rgs19 2610042F04Rik|AI324841|AW547781|GAIP regulator of G-protein signaling 19 protein-coding common_peak2_41_176_0.536481404901857_7.73584625253393_3.61080122859379 chr2 37452186 37452861 + 3.61080122859379 NA intron (NM_001033960, intron 1 of 18) CpG 269 NM_001033960 227800 Mm.383192 NM_146121 ENSMUSG00000035437 Rabgap1 Gapcena|mKIAA4104 RAB GTPase activating protein 1 protein-coding common_peak2_81_724_-0.313781608650514_9.34494638057704_3.61053071195515 chr6 91123896 91125797 + 3.61053071195515 NA Intergenic Intergenic -8020 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak2_28_100_0.690451831760774_7.00343739863218_3.61013652032979 chr6 118455175 118455827 + 3.61013652032979 NA promoter-TSS (NM_028335) promoter-TSS (NM_028335) 5 NM_028335 72720 Mm.212572 NM_028335 ENSMUSG00000030145 Zfp248 2810037F07Rik|E130106N01Rik zinc finger protein 248 protein-coding common_peak1_28_100_0.690451831760774_7.00343739863218_3.61013652032979 chr11 115126241 115126905 + 3.61013652032979 NA intron (NM_145634, intron 1 of 6) intron (NM_145634, intron 1 of 6) 7419 NM_001169153 246746 Mm.277387 NM_145634 ENSMUSG00000047798 Cd300lf CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3 CD300 molecule like family member F protein-coding common_peak1_21_64_0.837429929665497_6.4410827778612_3.61002338187679 chr3 105814468 105814896 + 3.61002338187679 NA promoter-TSS (NR_045845) promoter-TSS (NR_045845) -885 NR_045845 433637 Mm.331285 NR_045845 ENSMUSG00000104835 Gm5547 EG433637 predicted gene 5547 ncRNA common_peak2_21_64_0.837429929665497_6.4410827778612_3.61002338187679 chr15 80977730 80978262 + 3.61002338187679 NA intron (NM_134091, intron 1 of 21) CpG 231 NM_134091 105835 Mm.274943 NM_134091 ENSMUSG00000042303 Sgsm3 1810012I01Rik|AI428557|BB175482|Cip85|R75178|RUSC3|Rutbc3 small G protein signaling modulator 3 protein-coding common_peak2_21_64_0.837429929665497_6.4410827778612_3.61002338187679-2 chr9 115663963 115664224 + 3.61002338187679 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -245362 NM_028638 73748 Mm.485018 NM_028638 ENSMUSG00000056880 Gadl1 1110027M19Rik|ADC|CSADC glutamate decarboxylase-like 1 protein-coding common_peak1_21_64_0.837429929665497_6.4410827778612_3.61002338187679-2 chr4 149690082 149690601 + 3.61002338187679 NA intron (NM_001029837, intron 1 of 23) intron (NM_001029837, intron 1 of 23) 8367 NM_001164050 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_22_192_-0.653996233174571_7.2654589206808_3.60981880422134 chr11 106036142 106036727 + 3.60981880422134 NA promoter-TSS (NM_027946) promoter-TSS (NM_027946) -438 NM_027946 71833 Mm.307455 NM_027946 ENSMUSG00000049354 Dcaf7 1700012F10Rik|2610037L01Rik|C86529|HAN11|Wdr68 DDB1 and CUL4 associated factor 7 protein-coding unique_peak2_22_192_-0.653996233174571_7.2654589206808_3.60981880422134 chr19 11817900 11819393 + 3.60981880422134 NA intron (NM_152220, intron 1 of 10) CpG 757 NM_001286543 20908 Mm.272264 NM_011502 ENSMUSG00000041488 Stx3 Syn-3 syntaxin 3 protein-coding common_peak1_83_744_-0.310397349178313_9.38589794076037_3.60872344831418 chr9 92273733 92275309 + 3.60872344831418 NA Intergenic Intergenic -1081 NM_008880 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding common_peak2_83_744_-0.310397349178313_9.38589794076037_3.60872344831418 chr1 133609357 133610839 + 3.60872344831418 NA intron (NM_009227, intron 1 of 4) CpG 182 NM_009227 20643 Mm.249110 NM_009227 ENSMUSG00000090553 Snrpe AL022645|C76690|SME small nuclear ribonucleoprotein E protein-coding common_peak1_13_120_-0.858910798443024_6.48940783805308_3.60802006917341 chr5 149234886 149235295 + 3.60802006917341 NA Intergenic Intergenic -29914 NM_001308462 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding common_peak2_101_922_-0.275903749331961_9.71223496297979_3.60706528247642 chr7 25272891 25275955 + 3.60706528247642 NA intron (NM_001302811, intron 2 of 20) intron (NM_001302811, intron 2 of 20) 6724 NM_001302811 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak1_80_715_-0.317473694271378_9.32507893012857_3.60682870047919 chr6 86732762 86734005 + 3.60682870047919 NA promoter-TSS (NM_011818) promoter-TSS (NM_011818) -5 NM_011818 23885 Mm.321452 NM_011818 ENSMUSG00000001157 Gmcl1 2810049L19Rik|Btbd13|DIP|Gcl|Gcl-1|glc-1|mglc-1 germ cell-less, spermatogenesis associated 1 protein-coding common_peak2_264_2193_0.164499541918241_11.1815975813623_3.60559868739507 chr2 157565462 157567953 + 3.60559868739507 NA promoter-TSS (NM_016916) promoter-TSS (NM_016916) -346 NM_016916 53619 Mm.480461 NM_016916 ENSMUSG00000067787 Blcap AI462828|Bc10 bladder cancer associated protein protein-coding common_peak2_201_1539_0.194745869209548_10.686087570187_3.60325658626932 chr14 60719731 60724406 + 3.60325658626932 NA intron (NM_001033272, intron 4 of 12) intron (NM_001033272, intron 4 of 12) -10836 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak2_97_585_0.308731693674792_9.34912270125965_3.60039379178653 chr15 79402533 79404082 + 3.60039379178653 NA promoter-TSS (NM_001253819) promoter-TSS (NM_001253819) -4 NM_172608 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak1_97_585_0.308731693674792_9.34912270125965_3.60039379178653 chr17 47628842 47630078 + 3.60039379178653 NA Intergenic CpG -1230 NM_198421 224836 Mm.59393 NM_198421 ENSMUSG00000090115 Usp49 C330046L10Rik|Gm545 ubiquitin specific peptidase 49 protein-coding common_peak2_55_478_-0.390704784531898_8.70852945347023_3.60010103894854 chr16 19984088 19985839 + 3.60010103894854 NA Intergenic Intergenic -1914 NM_183390 239743 Mm.86699 NM_183390 ENSMUSG00000043008 Klhl6 - kelch-like 6 protein-coding common_peak1_255_2097_0.167903545293324_11.1187507352239_3.59862802171332 chr6 50380653 50383614 + 3.59862802171332 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 704 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_26_224_-0.591573624377443_7.51799437902832_3.59813421396973 chr9 44417499 44417997 + 3.59813421396973 NA exon (NM_201372, exon 2 of 11) exon (NM_201372, exon 2 of 11) 259 NM_201372 382073 Mm.259573 NM_201372 ENSMUSG00000043923 Ccdc84 D630044F24Rik|Gm1114 coiled-coil domain containing 84 protein-coding common_peak2_38_326_-0.480203375890222_8.11304513755297_3.597980700143-2 chr5 123523410 123524654 + 3.597980700143 NA intron (NM_023232, intron 1 of 5) CpG 132 NM_023232 66593 Mm.46716 NM_023232 ENSMUSG00000029433 Diablo 0610041G12Rik|1700006L01Rik|AU040403|Smac diablo, IAP-binding mitochondrial protein protein-coding common_peak2_50_234_0.471153830562457_8.11209386184623_3.597980700143 chrX 134276231 134277493 + 3.597980700143 NA 5' UTR (NM_001167994, exon 1 of 14) 5' UTR (NM_001167994, exon 1 of 14) 122 NM_172540 215201 Mm.289368 NM_172540 ENSMUSG00000067369 Trmt2b 4732479N06Rik TRM2 tRNA methyltransferase 2B protein-coding common_peak2_38_326_-0.480203375890222_8.11304513755297_3.597980700143 chr14 56275513 56277150 + 3.597980700143 NA Intergenic Intergenic -14071 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak1_24_208_-0.621343939944499_7.39668716210863_3.59770947007113 chr6 90678636 90679156 + 3.59770947007113 NA intron (NM_001134383, intron 4 of 13) intron (NM_001134383, intron 4 of 13) 37633 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding unique_peak2_24_208_-0.621343939944499_7.39668716210863_3.59770947007113 chr14 54876177 54877631 + 3.59770947007113 NA exon (NM_001167908, exon 1 of 2) exon (NM_001167908, exon 1 of 2) 634 NM_001167908 105651 Mm.297365 NM_001167908 ENSMUSG00000072494 Ppp1r3e A630071A11Rik|AW049239|Gm1211 protein phosphatase 1, regulatory (inhibitor) subunit 3E protein-coding common_peak1_130_1221_-0.237941307971857_10.1360579158328_3.59753365140923 chr1 40472502 40473893 + 3.59753365140923 NA intron (NM_001161843, intron 3 of 9) intron (NM_001161843, intron 3 of 9) 7191 NM_008365 16182 Mm.253664 NM_008365 ENSMUSG00000026070 Il18r1 Il18ralpha|Il1rrp interleukin 18 receptor 1 protein-coding unique_peak2_7_74_-1.15917773855707_5.64922982121735_3.5959343743123-2 chrX 75753857 75754555 + 3.5959343743123 NA intron (NR_029443, intron 3 of 8) intron (NR_029443, intron 3 of 8) 10493 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA unique_peak2_7_74_-1.15917773855707_5.64922982121735_3.5959343743123 chr12 115193085 115193569 + 3.5959343743123 NA Intergenic Intergenic 502467 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA common_peak1_98_892_-0.281061901307059_9.66198541446769_3.59592864307717 chr15 79546759 79547580 + 3.59592864307717 NA promoter-TSS (NM_199079) promoter-TSS (NM_199079) -428 NM_199080 67040 Mm.29644 NM_152806 ENSMUSG00000055065 Ddx17 2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 protein-coding common_peak2_186_1390_0.205010969559785_10.5444121893221_3.59541220215125 chr2 52423140 52425770 + 3.59541220215125 NA intron (NM_182994, intron 1 of 5) CpG 419 NM_182994 75423 Mm.314378 NM_182994 ENSMUSG00000036093 Arl5a 2410015N24Rik|2810410P22Rik|AA408731|AW610751|Arl5|T25534 ADP-ribosylation factor-like 5A protein-coding unique_peak2_30_258_-0.550126082952248_7.74174524621043_3.59540361878165-2 chrX 13346756 13348215 + 3.59540361878165 NA Intergenic Intergenic 66463 NM_010028 13205 Mm.289662 NM_010028 ENSMUSG00000000787 Ddx3x D1Pas1-rs2|Ddx3|Fin14 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked protein-coding common_peak1_30_258_-0.550126082952248_7.74174524621043_3.59540361878165 chr17 31828464 31829118 + 3.59540361878165 NA Intergenic Intergenic 27001 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding unique_peak2_30_258_-0.550126082952248_7.74174524621043_3.59540361878165 chr8 94306669 94308111 + 3.59540361878165 NA intron (NM_172410, intron 17 of 22) intron (NM_172410, intron 17 of 22) -16921 NR_029552 723956 NR_029552 ENSMUSG00000065512 Mir138-2 Mirn138-2|mir-138-2 microRNA 138-2 ncRNA common_peak1_30_258_-0.550126082952248_7.74174524621043_3.59540361878165-2 chr17 35048772 35049444 + 3.59540361878165 NA Intergenic B1_Mus1|SINE|Alu -1135 NM_033444 114584 Mm.29524 NM_033444 ENSMUSG00000007041 Clic1 Clcp|G6 chloride intracellular channel 1 protein-coding common_peak1_18_159_-0.721563891490472_6.96114614914213_3.59427875658725 chr17 73034731 73035151 + 3.59427875658725 NA Intergenic Intergenic -73044 NM_001177968 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding unique_peak2_18_159_-0.721563891490472_6.96114614914213_3.59427875658725 chr12 100892603 100893917 + 3.59427875658725 NA intron (NM_175493, intron 1 of 2) intron (NM_175493, intron 1 of 2) 6264 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding unique_peak2_18_159_-0.721563891490472_6.96114614914213_3.59427875658725-2 chr8 123318085 123319117 + 3.59427875658725 NA promoter-TSS (NM_016925) promoter-TSS (NM_016925) -25 NM_016925 14087 Mm.6536 NM_016925 ENSMUSG00000032815 Fanca AW208693|FACA Fanconi anemia, complementation group A protein-coding common_peak2_213_1660_0.187746372579753_10.7917095442523_3.59383896654796 chr15 101245312 101247911 + 3.59383896654796 NA Intergenic CpG -20235 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding common_peak2_42_182_0.530027331969908_7.780713504269_3.59349038310324 chr18 36414675 36416111 + 3.59349038310324 NA intron (NM_026027, intron 3 of 3) B3A|SINE|B2 39102 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_122_796_0.267141867228238_9.77200684760459_3.59317157456818 chr10 121473578 121476460 + 3.59317157456818 NA intron (NM_138956, intron 1 of 4) intron (NM_138956, intron 1 of 4) 1231 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding common_peak2_95_569_0.312181981412703_9.31090909975846_3.59298467633891 chr17 27633999 27635968 + 3.59298467633891 NA intron (NM_025963, intron 1 of 5) CpG 259 NM_025963 67097 Mm.275810 NM_025963 ENSMUSG00000052146 Rps10 2210402A09Rik ribosomal protein S10 protein-coding common_peak2_154_1085_0.229979403808265_10.1997980897085_3.59269441925925 chr19 9064703 9067397 + 3.59269441925925 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 21906 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_154_1085_0.229979403808265_10.1997980897085_3.59269441925925 chr5 115326525 115328153 + 3.59269441925925 NA exon (NM_025573, exon 1 of 4) exon (NM_025573, exon 1 of 4) 162 NR_036616 108014 Mm.287826 NM_025573 ENSMUSG00000029538 Srsf9 25kDa|2610029M16Rik|SRp30c|Sfrs9 serine/arginine-rich splicing factor 9 protein-coding common_peak2_115_736_0.276367127790211_9.66370437299017_3.59187073359842 chr8 13642396 13645300 + 3.59187073359842 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 33739 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_140_1327_-0.227773827767622_10.2611525174631_3.5910865107411 chr18 79072269 79074184 + 3.5910865107411 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 36165 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_33_128_0.618921316737273_7.32068791379189_3.59045474668395-2 chr7 45798033 45798780 + 3.59045474668395 NA exon (NM_001005511, exon 13 of 16) exon (NM_001005511, exon 13 of 16) 13026 NM_001290990 381983 Mm.44928 NM_001005511 ENSMUSG00000062044 Lmtk3 BC059845|aatyk3 lemur tyrosine kinase 3 protein-coding common_peak1_33_128_0.618921316737273_7.32068791379189_3.59045474668395 chr1 80213254 80214030 + 3.59045474668395 NA exon (NM_173425, exon 1 of 2) exon (NM_173425, exon 1 of 2) 302 NM_173425 241128 Mm.145511 NM_173425 ENSMUSG00000043230 Fam124b A830043J08Rik family with sequence similarity 124, member B protein-coding common_peak2_167_1620_-0.205356798159974_10.5599899764376_3.59011823799194 chr17 34836071 34838451 + 3.59011823799194 NA promoter-TSS (NM_019442) promoter-TSS (NM_019442) 242 NM_001163770 112403 Mm.275309 NM_033613 ENSMUSG00000040482 Dxo Dom3z|NG6 decapping exoribonuclease protein-coding common_peak2_96_872_-0.284499480266032_9.62758810349643_3.58942991821558 chr13 54187442 54189687 + 3.58942991821558 NA Intergenic Intergenic -3565 NM_001010973 15466 Mm.57243 NM_008286 ENSMUSG00000034987 Hrh2 - histamine receptor H2 protein-coding common_peak1_65_571_-0.355939077931152_8.98190179781281_3.58900822519837 chr16 32176894 32177710 + 3.58900822519837 NA Intergenic Intergenic -2498 NM_001033539 328660 Mm.441006 NM_001033539 ENSMUSG00000075269 Bex6 B020003O03Rik brain expressed family member 6 protein-coding common_peak2_273_2291_0.160558538964311_11.2426705982391_3.58885382979965 chr12 99391406 99394248 + 3.58885382979965 NA intron (NM_183186, intron 1 of 5) CpG 57247 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak2_407_4538_-0.120651062251369_12.0878332418122_3.58595573294236 chr10 128490952 128496172 + 3.58595573294236 NA TTS (NM_172259) TTS (NM_172259) 263 NM_010860 17904 Mm.337074 NM_010860 ENSMUSG00000090841 Myl6 ESMLC|LC17|LC17-GI|MLC-3|MLC1SM|Myln myosin, light polypeptide 6, alkali, smooth muscle and non-muscle protein-coding common_peak1_57_496_-0.381826415863362_8.76618883363061_3.58502008250694 chr3 53016699 53017454 + 3.58502008250694 NA exon (NM_026225, exon 1 of 19) exon (NM_026225, exon 1 of 19) 147 NM_026225 67542 Mm.249548 NM_026225 ENSMUSG00000027742 Cog6 4933405E16Rik|AU018618|mKIAA1134 component of oligomeric golgi complex 6 protein-coding common_peak2_92_545_0.318059579967738_9.25178693090372_3.58376518946328 chr13 54564588 54565949 + 3.58376518946328 NA 5' UTR (NM_133797, exon 1 of 9) 5' UTR (NM_133797, exon 1 of 9) 114 NM_001252647 97820 Mm.24593 NM_133797 ENSMUSG00000025871 4833439L19Rik 4930558H15Rik|C81457|Kiaa1191|P33monox RIKEN cDNA 4833439L19 gene protein-coding common_peak2_42_361_-0.454118716829255_8.27278652866858_3.58330302718307 chr8 123858576 123860198 + 3.58330302718307 NA exon (NM_028536, exon 2 of 4) exon (NM_028536, exon 2 of 4) 822 NM_028536 73420 Mm.157746 NM_028536 ENSMUSG00000031971 Ccsap 1700054N08Rik|AI853424 centriole, cilia and spindle associated protein protein-coding common_peak2_181_1342_0.20771376447896_10.4951004716669_3.58256356469744 chr10 34018627 34020954 + 3.58256356469744 NA promoter-TSS (NM_025614) promoter-TSS (NM_025614) -174 NM_025614 66521 Mm.28528 NM_025614 ENSMUSG00000019782 Rwdd1 0710001K08Rik|2610002D06Rik|2700069A07Rik|IH1 RWD domain containing 1 protein-coding common_peak2_185_1820_-0.193086174902891_10.7339721195254_3.58191028587717 chr3 35931002 35933921 + 3.58191028587717 NA promoter-TSS (NM_001205362) promoter-TSS (NM_001205362) -127 NM_001205362 114893 Mm.374810 NM_033623 ENSMUSG00000027708 Dcun1d1 Rp42|SCCRO|Tes3|pTes3 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) protein-coding common_peak1_205_1579_0.192451351898631_10.7219345190138_3.58095669401855 chr6 72961612 72963757 + 3.58095669401855 NA Intergenic Intergenic -3936 NM_001190327 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding common_peak1_33_283_-0.519598547344154_7.8899478458326_3.57994509938307 chr8 14993078 14993853 + 3.57994509938307 NA intron (NM_172751, intron 27 of 28) ORR1F|LTR|ERVL-MaLR -17560 NM_029116 74901 Mm.46675 NM_029116 ENSMUSG00000055675 Kbtbd11 2900016B01Rik|4930465M17Rik|mKIAA0711 kelch repeat and BTB (POZ) domain containing 11 protein-coding common_peak2_181_1775_-0.195458512443702_10.6966866101283_3.57939186967034 chr11 58927191 58929400 + 3.57939186967034 NA Intergenic Intergenic 10238 NM_138678 192194 Mm.22540 NM_138678 ENSMUSG00000020490 Btnl10 BUTR-1|Butr1 butyrophilin-like 10 protein-coding common_peak2_90_529_0.322496493269485_9.2110967960853_3.57900822427999 chr8 13661879 13664591 + 3.57900822427999 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 14352 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_52_247_0.461545455056237_8.18496903791499_3.57819040489467 chr4 116463520 116464327 + 3.57819040489467 NA 5' UTR (NM_008641, exon 1 of 29) 5' UTR (NM_008641, exon 1 of 29) 258 NM_001042743 17776 Mm.9287 NM_008641 ENSMUSG00000003810 Mast2 MAST205|Mtssk microtubule associated serine/threonine kinase 2 protein-coding common_peak2_52_247_0.461545455056237_8.18496903791499_3.57819040489467 chr9 44537291 44538903 + 3.57819040489467 NA Intergenic Intergenic -11676 NM_007551 12145 Mm.6246 NM_007551 ENSMUSG00000047880 Cxcr5 Blr1|CXC-R5|CXCR-5|Gpcr6|MDR15 chemokine (C-X-C motif) receptor 5 protein-coding common_peak1_224_2266_-0.172284451297834_11.0604264500919_3.57772800809121 chr11 72960092 72962262 + 3.57772800809121 NA promoter-TSS (NM_001163337) promoter-TSS (NM_001163337) 8 NM_001163337 53313 Mm.6306 NM_016745 ENSMUSG00000020788 Atp2a3 SERCA3b|Serca3 ATPase, Ca++ transporting, ubiquitous protein-coding common_peak1_184_1371_0.205824471916918_10.5249770021313_3.57764885368727 chr2 166099890 166102304 + 3.57764885368727 NA intron (NM_001252579, intron 3 of 20) ORSL-2a|DNA|hAT-Tip100 54188 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak2_23_74_0.784956777596214_6.62129707929399_3.57764330776532 chr2 106002806 106003358 + 3.57764330776532 NA intron (NR_033993, intron 1 of 3) intron (NR_033993, intron 1 of 3) 467 NM_026992 99349 Mm.25661 NM_026992 ENSMUSG00000027166 Dnajc24 1700030A21Rik|2610027M02Rik|AV066965|AW240712|Dph4|MmDjC7|Zcsl3 DnaJ heat shock protein family (Hsp40) member C24 protein-coding common_peak1_23_74_0.784956777596214_6.62129707929399_3.57764330776532-2 chr4 126162839 126163327 + 3.57764330776532 NA promoter-TSS (NM_025856) promoter-TSS (NM_025856) 258 NM_001162533 66938 Mm.29813 NM_025856 ENSMUSG00000073758 Sh3d21 1700029G01Rik|AU019788 SH3 domain containing 21 protein-coding common_peak1_23_74_0.784956777596214_6.62129707929399_3.57764330776532 chr10 14016587 14017200 + 3.57764330776532 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 50514 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding unique_peak2_23_74_0.784956777596214_6.62129707929399_3.57764330776532 chr6 88106168 88106884 + 3.57764330776532 NA Intergenic Intergenic -2268 NR_105795 102465196 NR_105795 ENSMUSG00000099095 Mir6376 Gm27778|mmu-mir-6376 microRNA 6376 ncRNA common_peak2_195_1933_-0.187271220193445_10.8237364693801_3.57700845120623 chr17 35120185 35122508 + 3.57700845120623 NA promoter-TSS (NM_009975) promoter-TSS (NM_009975) -54 NM_009975 13001 Mm.378901 NM_009975 ENSMUSG00000024387 Csnk2b CK II beta casein kinase 2, beta polypeptide protein-coding common_peak2_198_1510_0.195693848682589_10.6591348695061_3.57592127222665 chr9 36767872 36769170 + 3.57592127222665 NA promoter-TSS (NM_008408) promoter-TSS (NM_008408) -943 NM_008408 16430 Mm.2863 NM_008408 ENSMUSG00000032116 Stt3a AA408947|BB081708|Itm1 STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) protein-coding common_peak1_51_442_-0.40912933272773_8.58659822219115_3.57557390192008 chr5 122993895 122994615 + 3.57557390192008 NA intron (NR_045820, intron 1 of 2) intron (NR_045820, intron 1 of 2) 4901 NR_045820 109202 Mm.30769 NM_175405 ENSMUSG00000056735 A930024E05Rik - RIKEN cDNA A930024E05 gene ncRNA common_peak1_126_832_0.260038008808497_9.8321916897698_3.5753155327426 chr6 127239627 127241096 + 3.5753155327426 NA Intergenic Intergenic 67606 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak1_90_812_-0.29476649935498_9.51972829239754_3.57500871281701 chr2 24974098 24975053 + 3.57500871281701 NA exon (NM_001031808, exon 2 of 2) exon (NM_001031808, exon 2 of 2) 523 NM_001031808 107733 Mm.23010 NM_001031808 ENSMUSG00000036850 Mrpl41 MRP-L27|Rpml27 mitochondrial ribosomal protein L41 protein-coding common_peak1_112_1033_-0.258500972142533_9.88476998424367_3.57471070597544-2 chr9 110475842 110477191 + 3.57471070597544 NA promoter-TSS (NM_010628) promoter-TSS (NM_010628) 178 NM_177771 270201 Mm.41744 NM_177771 ENSMUSG00000054792 Klhl18 A930041K15|AW545966 kelch-like 18 protein-coding common_peak1_112_1033_-0.258500972142533_9.88476998424367_3.57471070597544 chr19 21736896 21738418 + 3.57471070597544 NA Intergenic Intergenic -40683 NM_001033759 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_132_1242_-0.235710268390124_10.1617554468574_3.57372372083278 chr1 181231862 181233153 + 3.57372372083278 NA Intergenic Intergenic -20529 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak2_132_1242_-0.235710268390124_10.1617554468574_3.57372372083278 chr7 137410014 137411574 + 3.57372372083278 NA promoter-TSS (NM_029886) promoter-TSS (NM_029886) -38 NM_029886 77252 Mm.29184 NM_029886 ENSMUSG00000040139 9430038I01Rik - RIKEN cDNA 9430038I01 gene protein-coding common_peak2_86_497_0.332795898597771_9.12639988136697_3.57328459736479 chr1 152287213 152289136 + 3.57328459736479 NA Intergenic MLT1E3|LTR|ERVL-MaLR 98508 NM_025677 66637 Mm.379120 NM_025677 ENSMUSG00000014980 Tsen15 5730449L18Rik|AL023077|Sen15 tRNA splicing endonuclease subunit 15 protein-coding common_peak2_52_450_-0.401241857812268_8.61636269434925_3.5730325545572 chr3 101273982 101276097 + 3.5730325545572 NA TTS (NM_013486) TTS (NM_013486) 12900 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding common_peak1_36_146_0.580111306375046_7.48972799802389_3.5724378797401 chr16 44349120 44349804 + 3.5724378797401 NA intron (NM_144550, intron 1 of 17) intron (NM_144550, intron 1 of 17) 2061 NM_144550 212514 Mm.24035 NM_144550 ENSMUSG00000043065 Spice1 Ccdc52|D16Ertd480e spindle and centriole associated protein 1 protein-coding common_peak2_88_792_-0.298158686939791_9.48209771223408_3.57211771454951 chr15 103256832 103259388 + 3.57211771454951 NA intron (NM_001302341, intron 1 of 2) intron (NM_001302341, intron 1 of 2) 293 NM_001302341 18022 Mm.457989 NM_008685 ENSMUSG00000058794 Nfe2 NF-E2|NF-E2/P45|p45|p45NFE2|p45nf-e2 nuclear factor, erythroid derived 2 protein-coding common_peak1_266_2763_-0.155389015470787_11.3548473926529_3.57164487778473 chr13 21179396 21181571 + 3.57164487778473 NA 5' UTR (NM_009054, exon 1 of 8) 5' UTR (NM_009054, exon 1 of 8) 552 NM_009054 19720 Mm.314056 NM_009054 ENSMUSG00000021326 Trim27 AW538890|Gm19403|Rfp tripartite motif-containing 27 protein-coding common_peak2_58_506_-0.380315531961516_8.79568417102258_3.5712877146001 chr11 100713228 100714844 + 3.5712877146001 NA TTS (NM_024456) TTS (NM_024456) 186 NM_029307 75482 Mm.46175 NM_029307 ENSMUSG00000017832 Hspb9 1700007H20Rik heat shock protein, alpha-crystallin-related, B9 protein-coding common_peak2_47_405_-0.424948137906725_8.45286184823181_3.57109255069095 chr1 54853238 54855287 + 3.57109255069095 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 72125 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding unique_peak2_47_405_-0.424948137906725_8.45286184823181_3.57109255069095 chr16 18617869 18620380 + 3.57109255069095 NA Intergenic Intergenic 3279 NM_001001999 14724 Mm.475622 NM_010327 ENSMUSG00000050761 Gp1bb - glycoprotein Ib, beta polypeptide protein-coding common_peak1_17_46_0.95009651019503_6.02963710677515_3.57104865977359 chr18 84684410 84684784 + 3.57104865977359 NA intron (NM_023149, intron 1 of 11) intron (NM_023149, intron 1 of 11) 1105 NM_023149 66054 Mm.29646 NM_023149 ENSMUSG00000024644 Cndp2 0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1 CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding common_peak2_131_876_0.254111537588859_9.90348880123916_3.5704179196522 chr3 89163811 89165855 + 3.5704179196522 NA promoter-TSS (NM_001163432) promoter-TSS (NM_001163432) 38 NM_001163432 12748 Mm.288098 NM_007712 ENSMUSG00000068917 Clk2 AU041688 CDC-like kinase 2 protein-coding common_peak2_39_335_-0.474570883961627_8.15503198079795_3.57022222753148 chr5 151650172 151651890 + 3.57022222753148 NA intron (NM_027009, intron 1 of 8) intron (NM_027009, intron 1 of 8) 177 NM_027009 69263 Mm.12553 NM_027009 ENSMUSG00000033970 Rfc3 2810416I22Rik|38kDa|AU022547|Recc3 replication factor C (activator 1) 3 protein-coding common_peak2_23_199_-0.63008072168263_7.32881582893341_3.57008267015371 chr1 169968667 169969925 + 3.57008267015371 NA promoter-TSS (NM_010476) promoter-TSS (NM_010476) -91 NM_010476 15490 Mm.12882 NM_010476 ENSMUSG00000026675 Hsd17b7 AI266814|ERG27 hydroxysteroid (17-beta) dehydrogenase 7 protein-coding common_peak1_23_199_-0.63008072168263_7.32881582893341_3.57008267015371-2 chr17 34644667 34645235 + 3.57008267015371 NA promoter-TSS (NM_019873) promoter-TSS (NM_019873) 68 NM_019873 56299 Mm.10025 NM_019873 ENSMUSG00000033739 Fkbpl DIR1|NG7|Ppiase-X|Wisp39 FK506 binding protein-like protein-coding common_peak1_23_199_-0.63008072168263_7.32881582893341_3.57008267015371-4 chr6 87039341 87039977 + 3.57008267015371 NA Intergenic ID_B1|SINE|B4 -3187 NM_013528 14583 Mm.19893 NM_013528 ENSMUSG00000029992 Gfpt1 2810423A18Rik|AI324119|AI449986|GFA|GFAT|GFAT1|GFAT1m|Gfpt glutamine fructose-6-phosphate transaminase 1 protein-coding common_peak1_23_199_-0.63008072168263_7.32881582893341_3.57008267015371-3 chr2 68978329 68979006 + 3.57008267015371 NA intron (NM_172856, intron 3 of 9) intron (NM_172856, intron 3 of 9) 117110 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak1_23_199_-0.63008072168263_7.32881582893341_3.57008267015371 chr16 90809951 90810449 + 3.57008267015371 NA exon (NM_029497, exon 1 of 39) exon (NM_029497, exon 1 of 39) 213 NM_029497 207932 Mm.328688 NM_029497 ENSMUSG00000039929 Urb1 4921511H13Rik|5730405K23Rik|AA670781|AI645590|mKIAA0539 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) protein-coding common_peak1_125_823_0.26172094395492_9.81736099916068_3.56996425664931 chr7 142382992 142385183 + 3.56996425664931 NA intron (NM_009983, intron 2 of 8) intron (NM_009983, intron 2 of 8) 3783 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak1_101_618_0.300487489099549_9.42403934376404_3.56985054391589 chr17 84142486 84143948 + 3.56985054391589 NA Intergenic Intergenic 44730 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_284_2412_0.155992106212745_11.3146082533221_3.56895568859452 chrX 13070070 13073529 + 3.56895568859452 NA intron (NM_009481, intron 1 of 44) CpG 301 NM_009481 22284 Mm.242646 NM_009481 ENSMUSG00000031010 Usp9x 5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl ubiquitin specific peptidase 9, X chromosome protein-coding common_peak2_72_637_-0.335093587379241_9.14986582007525_3.56845361634406 chr14 45350553 45352085 + 3.56845361634406 NA 5' UTR (NM_019637, exon 1 of 11) 5' UTR (NM_019637, exon 1 of 11) 133 NM_019637 56291 Mm.202561 NM_019637 ENSMUSG00000053205 Styx 0610039A20Rik|hStyxb serine/threonine/tyrosine interaction protein protein-coding common_peak1_72_637_-0.335093587379241_9.14986582007525_3.56845361634406 chr14 56283856 56284348 + 3.56845361634406 NA Intergenic B3|SINE|B2 -21842 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak2_59_296_0.420949622983294_8.42479393229241_3.56818364957118 chr6 127636468 127638212 + 3.56818364957118 NA Intergenic Intergenic 59365 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak1_118_762_0.271533123405113_9.71130580853709_3.5677530829066 chr10 83543737 83544781 + 3.5677530829066 NA intron (NM_001033375, intron 1 of 32) CpG 318 NM_001033375 319277 Mm.491194 NM_001033375 ENSMUSG00000034560 Washc4 A230046K03Rik|AA589518|Kiaa1033|mKIAA1033 WASH complex subunit 4 protein-coding common_peak1_82_466_0.342227129458687_9.038392304439_3.56721653994584 chr6 4086105 4087364 + 3.56721653994584 NA intron (NM_009748, intron 1 of 3) intron (NM_009748, intron 1 of 3) 193 NM_009748 12068 Mm.286457 NM_009748 ENSMUSG00000032757 Bet1 AW555236|Bet-1 Bet1 golgi vesicular membrane trafficking protein protein-coding common_peak1_31_117_0.640222524949682_7.20275431183668_3.56676877483114 chr7 25705156 25705815 + 3.56676877483114 NA TTS (NM_011577) TTS (NM_011577) 13568 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak2_210_2103_-0.178319650153339_10.9497591642156_3.56611395723386 chr8 107435665 107438148 + 3.56611395723386 NA intron (NM_025830, intron 1 of 23) intron (NM_025830, intron 1 of 23) 508 NM_025830 66894 Mm.390058 NM_025830 ENSMUSG00000031930 Wwp2 1300010O06Rik|AA690238|AIP2|AW554328 WW domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak1_74_656_-0.329599852032663_9.194949634306_3.56592058440494 chr11 80183657 80184597 + 3.56592058440494 NA exon (NM_028019, exon 1 of 5) exon (NM_028019, exon 1 of 5) 255 NM_028019 71956 Mm.22985 NM_028019 ENSMUSG00000020707 Rnf135 0610037N03Rik|2410006N06Rik ring finger protein 135 protein-coding common_peak1_59_515_-0.375958511639194_8.82324799960366_3.56578178960509 chr11 62678895 62679987 + 3.56578178960509 NA Intergenic Lx2B2|LINE|L1 30777 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding common_peak2_82_733_-0.310130383674865_9.36457106100578_3.56539933085903 chr5 124861073 124863511 + 3.56539933085903 NA promoter-TSS (NM_001081750) promoter-TSS (NM_001081750) -71 NM_144819 215707 Mm.389693 NM_144819 ENSMUSG00000037979 Ccdc92 AW050178|D5Bwg0834e coiled-coil domain containing 92 protein-coding common_peak1_17_151_-0.743242151570918_6.87630643765813_3.56525612157116-3 chrX 8074917 8075254 + 3.56525612157116 NA promoter-TSS (NM_001290716) promoter-TSS (NM_001290716) -325 NM_011514 20937 Mm.9244 NM_011514 ENSMUSG00000039231 Suv39h1 AI852103|AL022883|DXHXS7466e|H3-K9-HMTase 1|KMT1A|mIS6 suppressor of variegation 3-9 homolog 1 (Drosophila) protein-coding common_peak1_17_151_-0.743242151570918_6.87630643765813_3.56525612157116-2 chr17 6745837 6746165 + 3.56525612157116 NA intron (NM_009510, intron 7 of 12) intron (NM_009510, intron 7 of 12) 36779 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak1_17_151_-0.743242151570918_6.87630643765813_3.56525612157116 chr11 65794489 65794904 + 3.56525612157116 NA Intergenic Intergenic -6337 NM_001316367 26398 Mm.412922 NM_009157 ENSMUSG00000033352 Map2k4 JNKK1|MEK4|MKK4|PRKMK4|Sek1|Serk1 mitogen-activated protein kinase kinase 4 protein-coding unique_peak2_17_151_-0.743242151570918_6.87630643765813_3.56525612157116 chr18 56737642 56738500 + 3.56525612157116 NA intron (NM_010721, intron 5 of 10) ID4_|SINE|ID 30258 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak1_79_443_0.349942983653383_8.9693873581768_3.56505965696011 chr10 122814322 122815882 + 3.56505965696011 NA intron (NM_176919, intron 4 of 8) intron (NM_176919, intron 4 of 8) 135787 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak2_100_610_0.301819623786727_9.40593838171209_3.56487901870543 chr8 106168095 106169825 + 3.56487901870543 NA promoter-TSS (NM_178798) promoter-TSS (NM_178798) 85 NM_178798 330836 Mm.46749 NM_178798 ENSMUSG00000031904 Slc7a6 AI643885|LAT-2|LAT3 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 protein-coding common_peak2_53_254_0.454466441167093_8.2215866574424_3.56461619075133 chr8 120494530 120496165 + 3.56461619075133 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) 6481 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_31_266_-0.537830357376031_7.79178075299954_3.56389162316933 chr5 23430822 23431375 + 3.56389162316933 NA TTS (NR_040469) TTS (NR_040469) 3255 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak2_43_189_0.516554445549359_7.82813283110563_3.56375427817683 chr15 75940575 75941626 + 3.56375427817683 NA 5' UTR (NM_030199, exon 1 of 2) 5' UTR (NM_030199, exon 1 of 2) 148 NM_030199 78834 Mm.273264 NM_030199 ENSMUSG00000050846 Zfp623 2610029D06Rik|AI847036 zinc finger protein 623 protein-coding common_peak2_100_911_-0.276041820559284_9.6948691038851_3.56367354942833 chr1 13592358 13594450 + 3.56367354942833 NA Intergenic ORR1D2|LTR|ERVL-MaLR -3494 NM_028173 72265 Mm.28765 NM_028173 ENSMUSG00000025935 Tram1 1810049E02Rik|TRAMP translocating chain-associating membrane protein 1 protein-coding common_peak2_77_428_0.354721923294672_8.92219479914688_3.56349724687052 chr5 144014271 144015491 + 3.56349724687052 NA promoter-TSS (NM_177682) promoter-TSS (NM_177682) -28 NM_177682 231874 Mm.320432 NM_177682 ENSMUSG00000029617 Ccz1 AU022870 CCZ1 vacuolar protein trafficking and biogenesis associated protein-coding common_peak2_175_1707_-0.198457583367471_10.6388634679368_3.5632426555364 chr4 134286346 134288865 + 3.5632426555364 NA promoter-TSS (NM_001163794) promoter-TSS (NM_001163794) 241 NM_146156 230809 Mm.22778 NM_146156 ENSMUSG00000050890 Pdik1l BC027088|stk35l2 PDLIM1 interacting kinase 1 like protein-coding common_peak1_186_1830_-0.191498401695313_10.7426668749497_3.5627684898919 chr13 43302656 43304322 + 3.5627684898919 NA exon (NM_001033399, exon 1 of 2) exon (NM_001033399, exon 1 of 2) 683 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak1_219_2207_-0.174008816019541_11.0215200487684_3.56228546945477 chr5 21249104 21251333 + 3.56228546945477 NA intron (NM_175437, intron 14 of 30) intron (NM_175437, intron 14 of 30) 63951 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak2_43_370_-0.448865322740495_8.31084271525055_3.56217899382637 chr9 105394924 105396104 + 3.56217899382637 NA promoter-TSS (NM_172461) promoter-TSS (NM_172461) 122 NM_025651 66595 Mm.84941 NM_025651 ENSMUSG00000032567 Aste1 1100001A21Rik|AV006403 asteroid homolog 1 (Drosophila) protein-coding common_peak1_150_1433_-0.217308923716352_10.3771748468437_3.5621159402488 chr9 99567996 99569524 + 3.5621159402488 NA 5' UTR (NM_028768, exon 1 of 22) 5' UTR (NM_028768, exon 1 of 22) 139 NM_001166138 74125 Mm.234823 NM_028768 ENSMUSG00000032468 Armc8 1200015K23Rik|Gid5|HSPC056 armadillo repeat containing 8 protein-coding common_peak1_99_602_0.303225622609011_9.38762700320459_3.5601053335351 chr4 133161430 133163318 + 3.5601053335351 NA intron (NM_153423, intron 1 of 8) intron (NM_153423, intron 1 of 8) 31741 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak2_154_1477_-0.214642762533524_10.4221091728794_3.5567767521543 chr14 47275898 47277923 + 3.5567767521543 NA promoter-TSS (NM_172598) promoter-TSS (NM_172598) -53 NM_172598 218973 Mm.265615 NM_172598 ENSMUSG00000037572 Wdhd1 A630092E18|AND-1|D630024B06Rik WD repeat and HMG-box DNA binding protein 1 protein-coding common_peak1_154_1477_-0.214642762533524_10.4221091728794_3.5567767521543 chr2 75657917 75659121 + 3.5567767521543 NA promoter-TSS (NM_198090) promoter-TSS (NM_198090) -740 NM_146130 229279 Mm.316306 NM_053263 ENSMUSG00000059005 Hnrnpa3 2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3 heterogeneous nuclear ribonucleoprotein A3 protein-coding common_peak2_61_310_0.412523745790059_8.48703264302563_3.55629124232894 chr15 83099673 83100965 + 3.55629124232894 NA 5' UTR (NM_023475, exon 1 of 12) 5' UTR (NM_023475, exon 1 of 12) 114 NM_023475 68607 Mm.30056 NM_023475 ENSMUSG00000058586 Serhl 0610008B10Rik|1110019M09Rik|AU019786 serine hydrolase-like protein-coding common_peak2_40_343_-0.464821489636672_8.19385400988376_3.55585765028093 chr1 53351803 53352776 + 3.55585765028093 NA intron (NM_001290984, intron 1 of 5) intron (NM_001290984, intron 1 of 5) 463 NM_001290984 70396 Mm.285783 NM_133728 ENSMUSG00000026095 Asnsd1 2210409M21Rik asparagine synthetase domain containing 1 protein-coding common_peak2_116_745_0.274046145505908_9.68005489300819_3.55579508196476 chr13 55321228 55323010 + 3.55579508196476 NA promoter-TSS (NM_009000) promoter-TSS (NM_009000) 64 NM_025596 66494 Mm.439805 NM_025596 ENSMUSG00000021486 Prelid1 2610524G07Rik|Preli PRELI domain containing 1 protein-coding common_peak1_116_745_0.274046145505908_9.68005489300819_3.55579508196476 chr9 107334488 107336136 + 3.55579508196476 NA intron (NM_133984, intron 4 of 10) B3|SINE|B2 3038 NM_133984 69536 Mm.259467 NM_133984 ENSMUSG00000032579 Hemk1 2310008M14Rik|AW049265 HemK methyltransferase family member 1 protein-coding common_peak1_48_221_0.482460370560578_8.0356460516304_3.55558457201204 chr11 5707123 5707669 + 3.55558457201204 NA exon (NM_026080, exon 3 of 4) exon (NM_026080, exon 3 of 4) 303 NM_026080 64660 Mm.7328 NM_026080 ENSMUSG00000020477 Mrps24 3110030K20Rik|AI414579|Rpms24 mitochondrial ribosomal protein S24 protein-coding common_peak1_98_594_0.304708605618858_9.36910016100473_3.55553710591607 chr10 96616030 96616908 + 3.55553710591607 NA promoter-TSS (NM_007569) promoter-TSS (NM_007569) -532 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_399_3733_0.125958224655607_11.929485324554_3.55494104497803 chr14 16364058 16366740 + 3.55494104497803 NA 5' UTR (NM_009409, exon 1 of 36) 5' UTR (NM_009409, exon 1 of 36) 193 NM_009409 21974 Mm.130362 NM_009409 ENSMUSG00000017485 Top2b D230016L12Rik|Top-2 topoisomerase (DNA) II beta protein-coding common_peak2_29_249_-0.557127852064384_7.6872203586299_3.55487661713928 chr4 88787628 88788652 + 3.55487661713928 NA promoter-TSS (NM_001161609).7 promoter-TSS (NM_001161609).7 163 NM_001098840 545650 Mm.473677 NM_001098840 ENSMUSG00000100234 Gm13277 OTTMUSG00000011270 predicted gene 13277 protein-coding common_peak1_40_170_0.543590750179527_7.68964788997566_3.55487661713928 chr4 53714141 53714829 + 3.55487661713928 NA intron (NM_139309, intron 1 of 9) CpG 303 NM_139309 246179 Mm.247210 NM_139309 ENSMUSG00000028414 Fktn D830030O17Rik|Fcmd fukutin protein-coding common_peak2_40_170_0.543590750179527_7.68964788997566_3.55487661713928 chr15 102233108 102234183 + 3.55487661713928 NA Intergenic Intergenic -1710 NM_013566 16421 Mm.58 NM_013566 ENSMUSG00000001281 Itgb7 Ly69 integrin beta 7 protein-coding common_peak1_27_232_-0.577621394636354_7.5753754473361_3.55460862072096 chr17 86166863 86167529 + 3.55460862072096 NA promoter-TSS (NM_011104) promoter-TSS (NM_011104) -589 NM_011104 18754 Mm.24614 NM_011104 ENSMUSG00000045038 Prkce 5830406C15Rik|PKC[e]|PKCepsilon|Pkce|R75156 protein kinase C, epsilon protein-coding unique_peak2_27_232_-0.577621394636354_7.5753754473361_3.55460862072096 chr16 56068079 56069529 + 3.55460862072096 NA Intergenic Intergenic -6600 NM_025483 66315 Mm.255784 NM_025483 ENSMUSG00000052917 Senp7 2410152H17Rik|2810413I22Rik|2900036C23Rik|6030449K19Rik|AI790676 SUMO1/sentrin specific peptidase 7 protein-coding common_peak1_439_4217_0.118784572151291_12.1017356658693_3.5545710221378 chr11 117317007 117321389 + 3.5545710221378 NA intron (NM_001113487, intron 2 of 10) intron (NM_001113487, intron 2 of 10) -12517 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_218_1712_0.184144106454914_10.8343814893115_3.55369179127296 chr11 6199508 6201233 + 3.55369179127296 NA promoter-TSS (NM_173748) promoter-TSS (NM_173748) 81 NM_173748 209586 Mm.25321 NM_173748 ENSMUSG00000053838 Nudcd3 AI427847|BC024322|mKIAA1068 NudC domain containing 3 protein-coding common_peak2_29_106_0.667189446196557_7.07506170949942_3.55314050129501-3 chr2 4588659 4589625 + 3.55314050129501 NA intron (NM_001177843, intron 15 of 23) intron (NM_001177843, intron 15 of 23) 29388 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_29_106_0.667189446196557_7.07506170949942_3.55314050129501-4 chr5 115235280 115236093 + 3.55314050129501 NA promoter-TSS (NM_026398) promoter-TSS (NM_026398) -165 NM_026398 117109 Mm.24636 NM_026398 ENSMUSG00000060152 Pop5 1500019J17Rik|2700077E03Rik|AW049989|Rnasep3 processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae) protein-coding common_peak1_29_106_0.667189446196557_7.07506170949942_3.55314050129501 chr16 42190143 42190808 + 3.55314050129501 NA Intergenic Intergenic 112994 NR_105858 102466172 NR_105858 ENSMUSG00000098300 Mir6540 Gm27780|mir-6540|mmu-mir-6540 microRNA 6540 ncRNA common_peak2_29_106_0.667189446196557_7.07506170949942_3.55314050129501-2 chr16 42190230 42190889 + 3.55314050129501 NA Intergenic Intergenic 112910 NR_105858 102466172 NR_105858 ENSMUSG00000098300 Mir6540 Gm27780|mir-6540|mmu-mir-6540 microRNA 6540 ncRNA common_peak2_29_106_0.667189446196557_7.07506170949942_3.55314050129501 chr10 39430992 39431888 + 3.55314050129501 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 61641 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_27_95_0.701602249296769_6.93576362536954_3.55263466131926 chr4 53227286 53227919 + 3.55263466131926 NA Intergenic Intergenic -18594 NR_040665 78180 Mm.243847 NR_040665 ENSMUSG00000086947 4930522O17Rik - RIKEN cDNA 4930522O17 gene ncRNA common_peak2_62_317_0.408726204667428_8.51724605761807_3.5515972464236 chr19 11539799 11541176 + 3.5515972464236 NA intron (NM_025658, intron 1 of 6) L1M2a|LINE|L1 3638 NM_025658 66607 Mm.441056 NM_025658 ENSMUSG00000024678 Ms4a4d 2210417J23Rik membrane-spanning 4-domains, subfamily A, member 4D protein-coding common_peak1_44_195_0.511468793449423_7.87044424083992_3.55063591589942 chr9 123716939 123717636 + 3.55063591589942 NA intron (NM_033322, intron 1 of 9) intron (NM_033322, intron 1 of 9) 270 NM_033322 93730 Mm.378263 NM_033322 ENSMUSG00000025245 Lztfl1 5530402H04Rik|6130400H19Rik|AI414725|AW048545 leucine zipper transcription factor-like 1 protein-coding common_peak2_44_195_0.511468793449423_7.87044424083992_3.55063591589942 chr4 133121756 133122980 + 3.55063591589942 NA Intergenic PB1D9|SINE|Alu -8265 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak2_44_195_0.511468793449423_7.87044424083992_3.55063591589942-2 chr7 141215261 141216476 + 3.55063591589942 NA promoter-TSS (NM_025886) promoter-TSS (NM_025886) 8 NM_025886 66985 Mm.21202 NM_025886 ENSMUSG00000038618 Rassf7 2400009B11Rik|AW210608 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 protein-coding common_peak1_63_551_-0.359046571280288_8.92900117113802_3.55012636885572 chr16 11475821 11476586 + 3.55012636885572 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 70555 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak2_63_551_-0.359046571280288_8.92900117113802_3.55012636885572 chr10 120664879 120666620 + 3.55012636885572 NA Intergenic Intergenic -99983 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_144_994_0.238216185959878_10.077660808411_3.54995804607245 chr18 61176316 61177768 + 3.54995804607245 NA promoter-TSS (NM_134134) promoter-TSS (NM_134134) 7 NM_178277 106894 Mm.22574 NM_134134 ENSMUSG00000024622 Hmgxb3 2510002C16Rik|A630042L21Rik|AI413166|mKIAA0194 HMG box domain containing 3 protein-coding common_peak2_153_1466_-0.215319303713967_10.4109935038164_3.54959367256496 chr1 91412374 91414894 + 3.54959367256496 NA promoter-TSS (NM_019479) promoter-TSS (NM_019479) -412 NM_019479 55927 Mm.280029 NM_019479 ENSMUSG00000067071 Hes6 AI326893|bHLHb41 hairy and enhancer of split 6 protein-coding common_peak2_195_1481_0.196771126977563_10.6317152957946_3.54876702504758 chr14 70174356 70176633 + 3.54876702504758 NA intron (NM_145978, intron 1 of 9) intron (NM_145978, intron 1 of 9) 1321 NM_001253736 213019 Mm.283968 NM_145978 ENSMUSG00000022090 Pdlim2 4732462F18Rik|Slim PDZ and LIM domain 2 protein-coding common_peak1_20_175_-0.681956974838799_7.1184531312179_3.5486475449795 chr8 46152077 46152506 + 3.5486475449795 NA Intergenic Intergenic -17265 NM_025747 66756 Mm.133623 NM_025747 ENSMUSG00000031631 Cfap97 1110068E21Rik|4933411K20Rik|AW049273|Kiaa1430|mKIAA1430 cilia and flagella associated protein 97 protein-coding unique_peak2_20_175_-0.681956974838799_7.1184531312179_3.5486475449795 chr6 125070801 125072194 + 3.5486475449795 NA intron (NM_001163268, intron 1 of 1) (TG)n|Simple_repeat|Simple_repeat 220 NM_001163268 381810 Mm.333386 NM_001163268 ENSMUSG00000067714 Lpar5 GPR93|Gm1072|Gpr92|LPA5 lysophosphatidic acid receptor 5 protein-coding unique_peak2_9_88_-1.01121151452198_5.97012767370541_3.54762341874443 chr9 35421486 35422078 + 3.54762341874443 NA Intergenic CpG -30294 NM_021339 57810 Mm.80509 NM_021339 ENSMUSG00000038119 Cdon CDO|Cd0|Orcam cell adhesion molecule-related/down-regulated by oncogenes protein-coding unique_peak2_25_216_-0.606129987803548_7.45848623854271_3.54695500552168-3 chr8 122415017 122416528 + 3.54695500552168 NA intron (NM_001310650, intron 16 of 17) intron (NM_001310650, intron 16 of 17) -6313 NM_145834 234836 Mm.222808 NM_145834 ENSMUSG00000046108 Il17c IL-17C interleukin 17C protein-coding unique_peak2_25_216_-0.606129987803548_7.45848623854271_3.54695500552168 chr16 23996525 23998073 + 3.54695500552168 NA Intergenic Intergenic -8687 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding unique_peak2_25_216_-0.606129987803548_7.45848623854271_3.54695500552168-2 chr2 131179109 131180117 + 3.54695500552168 NA exon (NM_007682, exon 1 of 1) exon (NM_007682, exon 1 of 1) 399 NM_007682 12616 Mm.440169 NM_007682 ENSMUSG00000068267 Cenpb CENP-B centromere protein B protein-coding common_peak2_161_1553_-0.208816394228476_10.4973625912935_3.54559208183675 chr16 32128923 32131195 + 3.54559208183675 NA Intergenic Intergenic 30257 NM_025892 66994 Mm.22990 NM_025892 ENSMUSG00000035790 Cep19 1500031L02Rik|AI428934|AL022620 centrosomal protein 19 protein-coding common_peak1_165_1189_0.219372322159398_10.326432019275_3.54501156504394 chr1 127636827 127639343 + 3.54501156504394 NA intron (NM_028135, intron 2 of 7) intron (NM_028135, intron 2 of 7) 39936 NM_028135 72160 Mm.281287 NM_028135 ENSMUSG00000026347 Tmem163 2610024A01Rik|SV31 transmembrane protein 163 protein-coding common_peak2_121_1126_-0.247140037938893_10.0147017812028_3.54497684850565 chr7 126694813 126698176 + 3.54497684850565 NA promoter-TSS (NM_029420) promoter-TSS (NM_029420) 494 NM_175103 66162 Mm.358692 NM_175103 ENSMUSG00000047721 Bola2 1110025L05Rik|BolA-2 bolA-like 2 (E. coli) protein-coding common_peak2_49_423_-0.415292951240458_8.52027397894297_3.54276422468476-2 chr4 140986694 140988143 + 3.54276422468476 NA intron (NM_029097, intron 1 of 28) intron (NM_029097, intron 1 of 28) 545 NM_001164366 74772 Mm.205625 NM_029097 ENSMUSG00000036622 Atp13a2 1110012E06Rik|AA589443 ATPase type 13A2 protein-coding common_peak2_49_423_-0.415292951240458_8.52027397894297_3.54276422468476 chr17 21422612 21423828 + 3.54276422468476 NA promoter-TSS (NM_011760) promoter-TSS (NM_011760) -7 NM_011760 22712 Mm.12916 NM_011760 ENSMUSG00000023882 Zfp54 2810034D10Rik|KRAB10|Zfp-54|Zfp76|mszf83 zinc finger protein 54 protein-coding common_peak1_20_60_0.846737306235611_6.35410599068069_3.54208301465755 chr12 111946022 111946532 + 3.54208301465755 NA Intergenic Intergenic -1795 NR_029464 77675 Mm.98331 NR_029464 5033406O09Rik 9130204G15Rik RIKEN cDNA 5033406O09 gene ncRNA common_peak1_20_60_0.846737306235611_6.35410599068069_3.54208301465755-2 chr5 135708182 135708614 + 3.54208301465755 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 19253 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak2_156_1498_-0.21230903354221_10.4436301511768_3.54059213089766 chr9 99121531 99124391 + 3.54059213089766 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 17250 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak2_476_4676_0.112643084330738_12.2476892555843_3.54045934273105 chr6 127147917 127156101 + 3.54045934273105 NA promoter-TSS (NM_009829) promoter-TSS (NM_009829) -961 NM_009829 12444 Mm.333406 NM_009829 ENSMUSG00000000184 Ccnd2 2600016F06Rik|AI256817|BF642806|C86853|Vin-1|Vin1|cD2 cyclin D2 protein-coding common_peak1_25_85_0.729156489938834_6.79084299967151_3.54038593416687-2 chr6 52962429 52962930 + 3.54038593416687 NA intron (NM_173406, intron 1 of 4) intron (NM_173406, intron 1 of 4) -53059 NM_001168277 231986 Mm.386865 NM_173406 ENSMUSG00000063568 Jazf1 AI591476|C820002C15|Jaz1|Tip27 JAZF zinc finger 1 protein-coding common_peak1_25_85_0.729156489938834_6.79084299967151_3.54038593416687 chr14 54036058 54036677 + 3.54038593416687 NA Intergenic MT2A|LTR|ERVL 217562 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_16_143_-0.76638874046814_6.78673063120824_3.54038593416684-2 chr3 105901057 105901452 + 3.54038593416684 NA intron (NM_027025, intron 1 of 6) intron (NM_027025, intron 1 of 6) -3167 NM_009631 11542 Mm.235024 NM_009631 ENSMUSG00000000562 Adora3 A3AR|A3R|AA3R|ARA3|Gpcr2 adenosine A3 receptor protein-coding common_peak1_16_143_-0.76638874046814_6.78673063120824_3.54038593416684 chr11 87690369 87690841 + 3.54038593416684 NA intron (NM_172448, intron 2 of 9) ID_B1|SINE|B4 -8919 NR_045139 68690 Mm.342009 NR_045139 1110028F11Rik - RIKEN cDNA 1110028F11 gene ncRNA common_peak2_113_720_0.277255581495709_9.63248323998868_3.53685524324188 chr19 40820808 40824182 + 3.53685524324188 NA Intergenic Intergenic -8784 NM_172839 240665 Mm.309 NM_172839 ENSMUSG00000025010 Ccnj D430039C20Rik cyclin J protein-coding common_peak2_64_332_0.397536153261635_8.57814644370208_3.53599935133701 chr9 86467125 86467932 + 3.53599935133701 NA intron (NM_177208, intron 1 of 38) CpG 374 NM_177208 320615 Mm.245500 NM_177208 ENSMUSG00000034973 Dopey1 B130005I07Rik|BC035275|C130028L17|D9Ertd809e dopey family member 1 protein-coding common_peak2_248_2546_-0.160942858952563_11.2341118147979_3.53577630292467 chr17 23802179 23805154 + 3.53577630292467 NA intron (NM_175229, intron 1 of 13) CpG 479 NM_175229 75956 Mm.5222 NM_175229 ENSMUSG00000039218 Srrm2 5033413A03Rik|AA410130|SRm300|mKIAA0324 serine/arginine repetitive matrix 2 protein-coding unique_peak2_32_274_-0.525967860751142_7.84030387803645_3.53538224268908 chr10 120624854 120626279 + 3.53538224268908 NA Intergenic Intergenic -140166 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak2_19_166_-0.692570064843276_7.03741926005241_3.53491226790913 chr12 87470261 87471190 + 3.53491226790913 NA intron (NM_025507, intron 1 of 13) MTB_Mm|LTR|ERVL-MaLR 1574 NM_025507 66354 Mm.271174 NM_025507 ENSMUSG00000021039 Snw1 2310008B08Rik|AW048543|NCoA-62|SKIP|Skiip SNW domain containing 1 protein-coding common_peak1_155_1487_-0.212990739127457_10.4326634415443_3.53323570309729 chr19 3574941 3576188 + 3.53323570309729 NA intron (NM_028999, intron 1 of 23) CpG 185 NM_001164159 52036 Mm.284686 NM_028999 ENSMUSG00000024908 Ppp6r3 4930528G08Rik|9130026N02Rik|D19Bwg1430e|D19Ertd703e|Pp6r3|Ppcs3|Pptcs3|Sapl|Saps3|mKIAA1558 protein phosphatase 6, regulatory subunit 3 protein-coding common_peak1_35_299_-0.497521017436858_7.98005818177745_3.53316563702007 chrX 73718812 73719494 + 3.53316563702007 NA intron (NM_007435, intron 1 of 9) intron (NM_007435, intron 1 of 9) -1338 NM_001313698 27061 Mm.17 NM_012060 ENSMUSG00000002015 Bcap31 Bap31 B cell receptor associated protein 31 protein-coding common_peak1_248_2025_0.169221926520494_11.0690294220614_3.53305350942048 chr10 50591874 50593551 + 3.53305350942048 NA promoter-TSS (NM_198007) promoter-TSS (NM_198007) 43 NM_198007 77987 Mm.222497 NM_198007 ENSMUSG00000038774 Ascc3 ASC1p200|B630009I04Rik|BC023451|D430001L07Rik|D630041L21|Helic1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding common_peak1_159_1530_-0.209287406309944_10.4756148643448_3.53259215466087-2 chr17 34836267 34837905 + 3.53259215466087 NA promoter-TSS (NM_001163770) promoter-TSS (NM_001163770) 67 NM_001163770 112403 Mm.275309 NM_033613 ENSMUSG00000040482 Dxo Dom3z|NG6 decapping exoribonuclease protein-coding common_peak1_159_1530_-0.209287406309944_10.4756148643448_3.53259215466087 chr10 44456722 44459433 + 3.53259215466087 NA intron (NM_007548, intron 1 of 6) intron (NM_007548, intron 1 of 6) 671 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding common_peak1_38_325_-0.475784704623217_8.11083580191947_3.53219991542654 chr7 102564987 102565582 + 3.53219991542654 NA intron (NM_009277, intron 1 of 7) intron (NM_009277, intron 1 of 7) 198 NM_001082552 20821 Mm.321227 NM_009277 ENSMUSG00000030966 Trim21 Ro52|Ssa1 tripartite motif-containing 21 protein-coding common_peak1_56_275_0.435974262772005_8.32651158816417_3.53174844974222 chr8 86892200 86893522 + 3.53174844974222 NA Intergenic MLTR14|LTR|ERV1 -7603 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_151_1059_0.230352587505395_10.1650248432033_3.53154579338542 chr1 134415400 134416277 + 3.53154579338542 NA 5' UTR (NM_001306069, exon 1 of 8) 5' UTR (NM_001306069, exon 1 of 8) 174 NM_001306069 72674 Mm.259976 NM_028320 ENSMUSG00000026457 Adipor1 2810031L11Rik|ACDCR1|CGI-45|Paqr1 adiponectin receptor 1 protein-coding common_peak1_118_1094_-0.249642784248891_9.97189376236409_3.53031422363955 chr12 102320115 102321799 + 3.53031422363955 NA intron (NM_001161365, intron 2 of 9) intron (NM_001161365, intron 2 of 9) 37316 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_290_2479_0.153348474242454_11.3527986423955_3.53016177753752 chr15 12116868 12119017 + 3.53016177753752 NA promoter-TSS (NM_011767) promoter-TSS (NM_011767) 91 NM_011767 22763 Mm.273496 NM_011767 ENSMUSG00000022201 Zfr C920030H05Rik zinc finger RNA binding protein protein-coding common_peak2_174_1695_-0.198369153161345_10.6287358779825_3.52612680556203 chr19 4200571 4204837 + 3.52612680556203 NA Intergenic Intergenic -1101 NM_011237 19367 Mm.277629 NM_011237 ENSMUSG00000024824 Rad9a Rad9 RAD9 checkpoint clamp component A protein-coding common_peak1_624_6594_0.0950694217541166_12.734691655016_3.52586492966167 chr19 12794280 12798455 + 3.52586492966167 NA promoter-TSS (NM_053009) promoter-TSS (NM_053009) -244 NM_053009 109910 Mm.290924 NM_053009 ENSMUSG00000024695 Zfp91 9130014I08Rik|A530054C17Rik|AL024263|AW545902|Pzf|Zfp-91 zinc finger protein 91 protein-coding common_peak1_16_42_0.977271506272074_5.91490050783814_3.52584576600981 chr2 126466444 126466806 + 3.52584576600981 NA intron (NM_001080944, intron 3 of 27) intron (NM_001080944, intron 3 of 27) 24928 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak2_45_202_0.499737198094689_7.91520451623252_3.52574675477438 chr4 115784507 115785663 + 3.52574675477438 NA exon (NM_181040, exon 1 of 9) exon (NM_181040, exon 1 of 9) 271 NM_181040 230649 Mm.109600 NM_181040 ENSMUSG00000028710 Atpaf1 6330547J17Rik|AI593252|ATP11|ATP11p ATP synthase mitochondrial F1 complex assembly factor 1 protein-coding common_peak1_22_191_-0.646501696627646_7.26171165240733_3.52424099052652-2 chr3 108653919 108654279 + 3.52424099052652 NA 5' UTR (NM_001177770, exon 1 of 11) 5' UTR (NM_001177770, exon 1 of 11) 109 NM_001177770 229725 Mm.214545 NM_145543 ENSMUSG00000027884 Clcc1 Mclc chloride channel CLIC-like 1 protein-coding common_peak1_32_123_0.623123637274005_7.26575812902388_3.52424099052652 chr16 76365776 76366311 + 3.52424099052652 NA intron (NM_173440, intron 1 of 3) intron (NM_173440, intron 1 of 3) 7006 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak1_22_191_-0.646501696627646_7.26171165240733_3.52424099052652 chr16 76680028 76680486 + 3.52424099052652 NA Intergenic Intergenic -307208 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak2_149_1421_-0.216943730143392_10.3652338845477_3.52380427037561 chr7 80504836 80507704 + 3.52380427037561 NA intron (NM_007550, intron 4 of 21) intron (NM_007550, intron 4 of 21) 28728 NM_007550 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding common_peak2_73_645_-0.328994392296158_9.17089315854584_3.52315179173017 chr14 20179795 20182031 + 3.52315179173017 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 869 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak1_57_282_0.430617382867043_8.3599669342654_3.52311206698981 chr11 78512187 78512777 + 3.52311206698981 NA promoter-TSS (NM_199199) promoter-TSS (NM_199199) 186 NM_026389 67811 Mm.197493 NM_026389 ENSMUSG00000001100 Poldip2 1300003F06Rik|Pdip38 polymerase (DNA-directed), delta interacting protein 2 protein-coding common_peak2_181_1773_-0.19383294039466_10.6958738241037_3.52300797953277 chr10 81104925 81106903 + 3.52300797953277 NA promoter-TSS (NM_023138) promoter-TSS (NM_023138) -33 NM_023138 26396 Mm.275436 NM_023138 ENSMUSG00000035027 Map2k2 AA589381|MEK2|MK2|Prkmk2 mitogen-activated protein kinase kinase 2 protein-coding common_peak1_67_354_0.385085668954838_8.66421804886946_3.52286178025196 chr7 78895333 78896668 + 3.52286178025196 NA promoter-TSS (NM_026531) promoter-TSS (NM_026531) 73 NM_001162939 68048 Mm.34109 NM_026531 ENSMUSG00000030609 Aen 2700083B06Rik|Isg20l1 apoptosis enhancing nuclease protein-coding unique_peak2_35_140_0.59174632066023_7.43542451272891_3.5216984369318 chr17 83831369 83832507 + 3.5216984369318 NA intron (NM_025325, intron 8 of 9) PB1D10|SINE|Alu 14852 NM_025325 107766 Mm.30100 NM_025325 ENSMUSG00000000673 Haao 0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding common_peak2_35_140_0.59174632066023_7.43542451272891_3.5216984369318 chr5 16469595 16470599 + 3.5216984369318 NA Intergenic Intergenic -83398 NM_001289460 15234 Mm.267078 NM_010427 ENSMUSG00000028864 Hgf C230052L06Rik|HGF/SF|NK1|NK2|SF|SF/HGF hepatocyte growth factor protein-coding common_peak2_82_732_-0.308163518965463_9.36358762865108_3.52161369221299 chr2 150748897 150749893 + 3.52161369221299 NA intron (NM_172117, intron 1 of 13) CpG 314 NM_172117 12497 Mm.275524 NM_172117 ENSMUSG00000033068 Entpd6 2700026H11Rik|Cd39l2|NTPDase-6 ectonucleoside triphosphate diphosphohydrolase 6 protein-coding common_peak1_30_257_-0.544545050688948_7.73895473007878_3.52158634758469 chr9 21016875 21017446 + 3.52158634758469 NA intron (NM_010493, intron 1 of 6) intron (NM_010493, intron 1 of 6) 1200 NM_010493 15894 Mm.435508 NM_010493 ENSMUSG00000037405 Icam1 CD54|Icam-1|Ly-47|MALA-2 intercellular adhesion molecule 1 protein-coding common_peak2_41_177_0.528353524018457_7.73991019297563_3.52158634758469-2 chr9 58275349 58276139 + 3.52158634758469 NA Intergenic Intergenic 22580 NM_026942 69106 Mm.216502 NM_026942 ENSMUSG00000032333 Stoml1 1810015E19Rik|AI847431|SLP1|STORP|UNC24|WPB72 stomatin-like 1 protein-coding common_peak2_41_177_0.528353524018457_7.73991019297563_3.52158634758469 chr2 125247044 125248188 + 3.52158634758469 NA 5' UTR (NM_023595, exon 1 of 6) 5' UTR (NM_023595, exon 1 of 6) 101 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak1_72_636_-0.332830535870672_9.14873429432096_3.52148145223516 chr5 124047321 124047958 + 3.52148145223516 NA Intergenic Intergenic -15379 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_38_158_0.560060494323505_7.59291320244611_3.52098039669772-2 chr4 149436668 149437461 + 3.52098039669772 NA Intergenic MMVL30-int|LTR|ERV1 -10433 NM_022022 63958 Mm.415260 NM_022022 ENSMUSG00000028960 Ube4b 4930551I19Rik|4933406G05Rik|AU014668|D4Bwg0973e|UFD2|UFD2a|Ufd2p|mKIAA0684 ubiquitination factor E4B protein-coding common_peak1_38_158_0.560060494323505_7.59291320244611_3.52098039669772 chr2 173026483 173027427 + 3.52098039669772 NA intron (NM_019547, intron 3 of 3) intron (NM_019547, intron 3 of 3) 5053 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak1_42_360_-0.45012785663322_8.27079109857056_3.52090029801416 chr13 117008258 117009109 + 3.52090029801416 NA intron (NM_001081009, intron 3 of 26) B1F|SINE|Alu 16833 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding unique_peak2_42_360_-0.45012785663322_8.27079109857056_3.52090029801416 chr11 70020200 70022126 + 3.52090029801416 NA intron (NM_001109752, intron 1 of 19) intron (NM_001109752, intron 1 of 19) 2558 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs, large homolog 4 (Drosophila) protein-coding unique_peak2_42_360_-0.45012785663322_8.27079109857056_3.52090029801416-2 chr11 98946953 98948789 + 3.52090029801416 NA intron (NM_001177302, intron 2 of 9) PB1D11|SINE|Alu 8160 NM_001177303 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_255_2100_0.165842061197546_11.1197814772718_3.52075549900235 chr6 128762879 128766252 + 3.52075549900235 NA Intergenic L1M2|LINE|L1 24076 NM_008527 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak2_50_235_0.465027727765615_8.11515691324465_3.52057765445703 chr9 53383739 53384830 + 3.52057765445703 NA exon (NM_212445, exon 1 of 8) exon (NM_212445, exon 1 of 8) 261 NM_212445 68304 Mm.427519 NM_212445 ENSMUSG00000034487 Kdelc2 2010004J24Rik|4833410J10Rik|AW549401 KDEL (Lys-Asp-Glu-Leu) containing 2 protein-coding common_peak1_50_235_0.465027727765615_8.11515691324465_3.52057765445703 chr6 126848509 126849656 + 3.52057765445703 NA promoter-TSS (NM_025358) promoter-TSS (NM_025358) 62 NM_025358 66108 Mm.29939 NM_025358 ENSMUSG00000000399 Ndufa9 1010001N11Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 protein-coding unique_peak2_15_135_-0.791209578125171_6.69185805218775_3.52050052979984 chr2 59055367 59056418 + 3.52050052979984 NA Intergenic L1MA9|LINE|L1 -37286 NM_001001178 227933 Mm.330234 NM_177650 ENSMUSG00000036641 Ccdc148 5830402J09 coiled-coil domain containing 148 protein-coding common_peak2_134_1261_-0.231183041264634_10.1859046743502_3.5203725091911 chr7 83883003 83885047 + 3.5203725091911 NA 5' UTR (NM_030705, exon 1 of 1) 5' UTR (NM_030705, exon 1 of 1) 316 NM_030705 80889 Mm.272998 NM_030705 ENSMUSG00000070462 Mesdc1 AW061151 mesoderm development candidate 1 protein-coding common_peak1_145_1004_0.235951551505694_10.0909555618191_3.52019275165365 chr13 41365925 41368156 + 3.52019275165365 NA intron (NM_001111324, intron 2 of 7) (CACAG)n|Simple_repeat|Simple_repeat -8039 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak2_116_1073_-0.251700312224267_9.94292812187328_3.52004753842764 chr8 79293883 79295878 + 3.52004753842764 NA promoter-TSS (NR_045823) promoter-TSS (NR_045823) 76 NM_133823 109136 Mm.26510 NM_133823 ENSMUSG00000037022 Mmaa 2810018E08Rik|AI840684 methylmalonic aciduria (cobalamin deficiency) type A protein-coding common_peak2_263_2186_0.162419376171856_11.175947193134_3.51937413961693 chr19 29521436 29523959 + 3.51937413961693 NA promoter-TSS (NR_015567) promoter-TSS (NR_015567) 415 NM_001081319 226089 Mm.353838 NM_177641 ENSMUSG00000038658 Ric1 C030046E11Rik|C130057E09Rik|Kiaa1432 RAB6A GEF complex partner 1 protein-coding common_peak2_51_441_-0.405869003564144_8.58496805760936_3.51919506323794 chr5 124011370 124013762 + 3.51919506323794 NA intron (NM_177876, intron 1 of 3) intron (NM_177876, intron 1 of 3) 15714 NR_105999 102465625 NR_105999 ENSMUSG00000098454 Mir7032 Gm27309|mmu-mir-7032 microRNA 7032 ncRNA common_peak1_85_490_0.332760267125613_9.1059593478775_3.51916749542342 chr10 82699112 82699937 + 3.51916749542342 NA intron (NM_001081218, intron 1 of 14) CpG 517 NM_001081218 67933 Mm.127405 NM_026462 ENSMUSG00000020246 Hcfc2 1700129L13Rik|AU019838 host cell factor C2 protein-coding common_peak2_79_703_-0.315072768633808_9.30189523432039_3.51898959657402 chr12 104967909 104969682 + 3.51898959657402 NA intron (NM_172500, intron 2 of 16) intron (NM_172500, intron 2 of 16) 29882 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_26_223_-0.585147355218009_7.5147812444486_3.51895319976778 chr17 83645360 83645992 + 3.51895319976778 NA Intergenic Intergenic -13781 NM_153512 225030 Mm.223506 NM_153512 ENSMUSG00000045053 Kcng3 KV6.3|Kv10.1a|Kv10.1b potassium voltage-gated channel, subfamily G, member 3 protein-coding common_peak1_19_55_0.883779305573173_6.24924457484419_3.51813163859042 chr13 43218673 43219156 + 3.51813163859042 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -47413 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_19_55_0.883779305573173_6.24924457484419_3.51813163859042-2 chr6 120180633 120181062 + 3.51813163859042 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) 87467 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak2_169_1639_-0.201225940466598_10.5788671292721_3.51789730457209 chr7 44739964 44743548 + 3.51789730457209 NA 5' UTR (NM_001289839, exon 2 of 5) 5' UTR (NM_001289839, exon 2 of 5) 6593 NM_001289836 243963 Mm.382935 NM_178734 ENSMUSG00000048012 Zfp473 D030014N22Rik|Znf473|zfp-100 zinc finger protein 473 protein-coding common_peak1_166_1200_0.216726169982325_10.3383835206968_3.51746754421113 chr19 5704345 5705885 + 3.51746754421113 NA intron (NM_010609, intron 1 of 2) intron (NM_010609, intron 1 of 2) 639 NM_010609 16530 Mm.440033 NM_010609 ENSMUSG00000024936 Kcnk7 2310014G03Rik|Kcnk6|Kcnk8|Knot|Mlk3 potassium channel, subfamily K, member 7 protein-coding common_peak1_122_1135_-0.244169338285971_10.0276624503617_3.51702567241018 chr2 35680520 35681710 + 3.51702567241018 NA intron (NM_001290641, intron 3 of 15) intron (NM_001290641, intron 3 of 15) -10879 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak2_148_1410_-0.217577270489643_10.3537136373524_3.5168926990292 chr9 120126657 120128670 + 3.5168926990292 NA promoter-TSS (NM_011029) promoter-TSS (NM_011029) -103 NM_011029 16785 Mm.4071 NM_011029 ENSMUSG00000032518 Rpsa 67kDa|67lr|AL022858|Lamr|Lamr1|Lamrl1|MLR|P40|P40-3|P40-8 ribosomal protein SA protein-coding common_peak1_268_2240_0.160432188058614_11.2101430275397_3.51643610704337 chr19 8773947 8775608 + 3.51643610704337 NA promoter-TSS (NM_026325) promoter-TSS (NM_026325) 292 NR_015538 100039957 Mm.220886 NR_015538 Gm2518 D630022E15Rik interferon induced transmembrane protein 2 pseudogene pseudo common_peak2_98_890_-0.277827157707758_9.66036804266804_3.51635445378765 chr13 114893792 114896750 + 3.51635445378765 NA intron (NM_008396, intron 2 of 29) intron (NM_008396, intron 2 of 29) 36770 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_286_2436_0.154088838607555_11.3279349550271_3.51574283121596 chr10 22730647 22732693 + 3.51574283121596 NA promoter-TSS (NM_011603) promoter-TSS (NM_011603) -223 NM_011603 237336 Mm.86670 NM_011603 ENSMUSG00000071359 Tbpl1 4732475G08|AW011832|AW491032|D18347|STD|TLF|TRF2|TRP|Tlp TATA box binding protein-like 1 protein-coding common_peak1_392_4338_-0.121925092816586_12.0221843244084_3.51552717737209 chr7 101450603 101455113 + 3.51552717737209 NA intron (NM_001008548, intron 2 of 30) intron (NM_001008548, intron 2 of 30) 1606 NM_001243757 207728 Mm.247564 NM_001008548 ENSMUSG00000030653 Pde2a CGS-PDE|cGSPDE phosphodiesterase 2A, cGMP-stimulated protein-coding unique_peak2_6_66_-1.23274906281256_5.44971465905149_3.5145787661347 chr10 19047016 19047501 + 3.5145787661347 NA Intergenic PB1D10|SINE|Alu -31848 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_59_514_-0.37315987828652_8.82184868292732_3.51359933459895 chr8 123028536 123029291 + 3.51359933459895 NA intron (NR_037865, intron 1 of 13) intron (NR_037865, intron 1 of 13) 13371 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_197_1953_-0.184147976967864_10.8401407634845_3.51274407936731 chr16 23126932 23128976 + 3.51274407936731 NA promoter-TSS (NM_145480) promoter-TSS (NM_145480) -224 NM_145480 106344 Mm.386835 NM_145480 ENSMUSG00000022881 Rfc4 A1|AI894123|AU040575|RFC37 replication factor C (activator 1) 4 protein-coding common_peak2_82_467_0.339141149584943_9.03993529437588_3.51240725433625 chr3 93551515 93553335 + 3.51240725433625 NA Intergenic Intergenic -2692 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak1_172_1672_-0.199011198545804_10.6087161307655_3.51149490090933 chr11 69661712 69663397 + 3.51149490090933 NA promoter-TSS (NM_011900) promoter-TSS (NM_011900) 95 NR_125917 24070 Mm.89579 NM_011900 ENSMUSG00000018761 Mpdu1 LEC35|SL15|Supl15h mannose-P-dolichol utilization defect 1 protein-coding common_peak2_368_3368_0.131607584250236_11.7839085052469_3.51149416664125 chr11 69690629 69697100 + 3.51149416664125 NA intron (NM_011614, intron 3 of 6) MER94|DNA|hAT-Blackjack 2234 NM_011614 21944 Mm.8983 NM_011614 ENSMUSG00000097328 Tnfsf12 Apo3l|Dr3l|Dr3lg|Tweak tumor necrosis factor (ligand) superfamily, member 12 protein-coding common_peak1_148_1031_0.233697746684367_10.1280761287654_3.50989442532256 chr11 118153050 118155012 + 3.50989442532256 NA Intergenic Intergenic -24812 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak2_148_1031_0.233697746684367_10.1280761287654_3.50989442532256 chr18 61176041 61177934 + 3.50989442532256 NA promoter-TSS (NM_134134) promoter-TSS (NM_134134) 62 NM_178277 106894 Mm.22574 NM_134134 ENSMUSG00000024622 Hmgxb3 2510002C16Rik|A630042L21Rik|AI413166|mKIAA0194 HMG box domain containing 3 protein-coding unique_peak2_14_127_-0.817955878588652_6.59102206070567_3.50667134586376-3 chr7 142348709 142349902 + 3.50667134586376 NA intron (NM_177265, intron 3 of 3) intron (NM_177265, intron 3 of 3) 22954 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding unique_peak2_14_127_-0.817955878588652_6.59102206070567_3.50667134586376-2 chr13 5704707 5705706 + 3.50667134586376 NA Intergenic ORR1G|LTR|ERVL-MaLR 152886 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak2_14_127_-0.817955878588652_6.59102206070567_3.50667134586376 chr11 79622723 79623770 + 3.50667134586376 NA promoter-TSS (NR_003283) promoter-TSS (NR_003283) -83 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202|OTTMUSG00000000185 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA common_peak1_142_1346_-0.223343788879875_10.2838622410224_3.506151462663 chr7 44853787 44855269 + 3.506151462663 NA intron (NM_026270, intron 4 of 4) CpG -2618 NM_021549 59047 Mm.238254 NM_021549 ENSMUSG00000002963 Pnkp 1810009G08Rik|PNK polynucleotide kinase 3'- phosphatase protein-coding common_peak2_433_4875_-0.114651785434081_12.1941565179032_3.5061472132809 chr2 164073984 164080977 + 3.5061472132809 NA intron (NM_021420, intron 1 of 10) intron (NM_021420, intron 1 of 10) 3302 NM_021420 58231 Mm.234472 NM_021420 ENSMUSG00000018209 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 protein-coding common_peak1_419_3976_0.121340006244321_12.0181348499274_3.50609170677984 chr11 86756263 86759066 + 3.50609170677984 NA promoter-TSS (NM_001003908) promoter-TSS (NM_001003908) -172 NM_001003908 67300 Mm.254588 NM_001003908 ENSMUSG00000047126 Cltc 3110065L21Rik|CHC|R74732 clathrin, heavy polypeptide (Hc) protein-coding common_peak1_58_290_0.420651062133542_8.39520087397505_3.50598253796273 chr4 132949585 132950888 + 3.50598253796273 NA Intergenic Intergenic -23859 NM_010208 14191 Mm.271665 NM_010208 ENSMUSG00000028874 Fgr - FGR proto-oncogene, Src family tyrosine kinase protein-coding common_peak2_58_290_0.420651062133542_8.39520087397505_3.50598253796273 chr7 30241084 30242646 + 3.50598253796273 NA intron (NM_146186, intron 30 of 32) intron (NM_146186, intron 30 of 32) -5100 NM_001289817 381867 Mm.483986 NM_001289817 ENSMUSG00000100512 Ovol3 Gm1903|movo3 ovo like zinc finger 3 protein-coding common_peak1_39_334_-0.470270746528003_8.15288191208113_3.50559552867394 chr5 88675573 88676217 + 3.50559552867394 NA promoter-TSS (NM_001098476) promoter-TSS (NM_001098476) 276 NM_178700 231413 Mm.332474 NM_178700 ENSMUSG00000044221 Grsf1 BB232551|C80280|D5Wsu31e G-rich RNA sequence binding factor 1 protein-coding common_peak2_51_242_0.457221052221507_8.15342302971654_3.50559552867394 chr2 118926315 118927358 + 3.50559552867394 NA exon (NM_028117, exon 1 of 1) exon (NM_028117, exon 1 of 1) 339 NM_028117 72136 Mm.486238 NM_028117 ENSMUSG00000074916 Chst14 2600016L03Rik|D4ST-1|D4st1 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 protein-coding common_peak2_389_3616_0.127083465016762_11.8841196151642_3.50377274010506 chr8 34144691 34150657 + 3.50377274010506 NA promoter-TSS (NM_026609) promoter-TSS (NM_026609) -935 NM_026609 68192 Mm.34212 NM_026609 ENSMUSG00000031513 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 protein-coding common_peak2_200_1532_0.192536234644228_10.6784100989809_3.503771099047 chr2 30414847 30417153 + 3.503771099047 NA promoter-TSS (NM_138748) promoter-TSS (NM_138748) -50 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding common_peak1_46_209_0.488885569759895_7.95868830254607_3.50322595253405 chr12 102664930 102665871 + 3.50322595253405 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 19620 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_52_248_0.455739833375032_8.1878718487556_3.50304889348946 chr5 30232519 30233237 + 3.50304889348946 NA intron (NM_027652, intron 1 of 9) CpG 260 NM_027652 28042 Mm.168854 NM_027652 ENSMUSG00000075703 Selenoi 4933402G07Rik|AI448296|AI452230|C79563|D5Wsu178e|Ept1|SELI|mKIAA1724 selenoprotein I protein-coding common_peak1_362_3951_-0.127665870795946_11.8845342961867_3.50292579904994 chr4 137593483 137595567 + 3.50292579904994 NA intron (NM_130879, intron 1 of 27) CpG 336 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak1_30_112_0.646503242319119_7.14343058357475_3.50290887101224-3 chr4 134551523 134552244 + 3.50290887101224 NA intron (NM_029100, intron 1 of 11) intron (NM_029100, intron 1 of 11) 283 NM_029100 74777 Mm.29773 NM_029100 ENSMUSG00000050989 Selenon 1110019I12Rik|AI414492|SelN|Sepn1 selenoprotein N protein-coding common_peak1_30_112_0.646503242319119_7.14343058357475_3.50290887101224-2 chr2 22776909 22777582 + 3.50290887101224 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 2918 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak1_30_112_0.646503242319119_7.14343058357475_3.50290887101224 chr11 109610827 109611426 + 3.50290887101224 NA intron (NM_145940, intron 1 of 12) CpG 263 NM_145940 52639 Mm.35817 NM_145940 ENSMUSG00000041895 Wipi1 4930533H01Rik|AW411817|D11Ertd498e WD repeat domain, phosphoinositide interacting 1 protein-coding common_peak1_22_70_0.788713684588828_6.5441039617991_3.50245002835591-4 chr8 122471638 122472254 + 3.50245002835591 NA intron (NM_001033142, intron 1 of 5) MERVL_2A-int|LTR|ERVL 4118 NM_001033142 68718 Mm.34356 NM_001033142 ENSMUSG00000014470 Rnf166 1110031E24Rik|AW555115|Zfp313l ring finger protein 166 protein-coding common_peak1_22_70_0.788713684588828_6.5441039617991_3.50245002835591-2 chr11 76202089 76202568 + 3.50245002835591 NA intron (NM_027773, intron 1 of 4) CpG 272 NM_027773 116972 Mm.188413 NM_027773 ENSMUSG00000069808 Fam57a 2310047D13Rik|4932415L08Rik|5430402E13Rik|5430420K21Rik|Wdt3 family with sequence similarity 57, member A protein-coding common_peak1_22_70_0.788713684588828_6.5441039617991_3.50245002835591 chr11 46372580 46373032 + 3.50245002835591 NA intron (NM_001281965, intron 1 of 16) Lx8b|LINE|L1 16709 NM_001281968 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding common_peak1_22_70_0.788713684588828_6.5441039617991_3.50245002835591-3 chr2 106002800 106003271 + 3.50245002835591 NA intron (NR_033993, intron 1 of 3) intron (NR_033993, intron 1 of 3) 514 NM_026992 99349 Mm.25661 NM_026992 ENSMUSG00000027166 Dnajc24 1700030A21Rik|2610027M02Rik|AV066965|AW240712|Dph4|MmDjC7|Zcsl3 DnaJ heat shock protein family (Hsp40) member C24 protein-coding unique_peak2_10_96_-0.966727410679532_6.11654913684736_3.50243100667692 chr1 38776832 38777574 + 3.50243100667692 NA Intergenic Intergenic 44012 NM_001029878 381338 Mm.487137 NM_028403 ENSMUSG00000048814 Lonrf2 2900060P06Rik|AI851349 LON peptidase N-terminal domain and ring finger 2 protein-coding common_peak2_159_1529_-0.20834477639017_10.4751435493849_3.50239056007468 chr3 95140576 95143006 + 3.50239056007468 NA intron (NM_027206, intron 1 of 1) intron (NM_027206, intron 1 of 1) 569 NM_027206 69769 Mm.34368 NM_027206 ENSMUSG00000013707 Tnfaip8l2 1810019A08Rik|AW610835|TIPE2 tumor necrosis factor, alpha-induced protein 8-like 2 protein-coding unique_peak2_21_182_-0.655902095590092_7.187748790489_3.50164137241237 chr12 69529424 69530457 + 3.50164137241237 NA Intergenic RMER5|LTR|ERV1 53088 NM_001033236 207965 Mm.102487 NM_001033236 ENSMUSG00000049882 Vcpkmt Gm71|Mettl21d|Mettl221d|VCP-KMT valosin containing protein lysine (K) methyltransferase protein-coding unique_peak2_21_182_-0.655902095590092_7.187748790489_3.50164137241237-2 chr4 12087246 12088148 + 3.50164137241237 NA intron (NM_177861, intron 1 of 27) intron (NM_177861, intron 1 of 27) 260 NM_177861 329795 Mm.475125 NM_177861 ENSMUSG00000049488 Tmem67 5330408M12Rik|B230117O07|b2b1163.1Clo|b2b1291.1Clo transmembrane protein 67 protein-coding common_peak1_21_182_-0.655902095590092_7.187748790489_3.50164137241237 chr9 108119861 108120345 + 3.50164137241237 NA intron (NM_007567, intron 3 of 11) GC_rich|Low_complexity|Low_complexity -13615 NR_126078 76873 Mm.436935 NR_126077 ENSMUSG00000102224 4930447F24Rik - RIKEN cDNA 4930447F24 gene ncRNA common_peak1_112_1031_-0.255707757250853_9.88337337679783_3.50096808172402 chr16 50431405 50432764 + 3.50096808172402 NA intron (NM_027444, intron 1 of 16) CpG 305 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding common_peak1_36_308_-0.491679376692964_8.02562333955789_3.50076707141522 chr19 38053750 38054486 + 3.50076707141522 NA promoter-TSS (NM_028760) promoter-TSS (NM_028760) -907 NM_028293 74107 Mm.9916 NM_028293 ENSMUSG00000024989 Cep55 1200008O12Rik|2700032M20Rik centrosomal protein 55 protein-coding common_peak2_114_729_0.27481373720445_9.6491595223696_3.50061200865452 chr11 34736510 34740872 + 3.50061200865452 NA intron (NM_033374, intron 2 of 51) intron (NM_033374, intron 2 of 51) 45214 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding unique_peak2_18_158_-0.712518751887465_6.95662357934062_3.50061084194519-2 chr5 105644662 105645838 + 3.50061084194519 NA Intergenic MTC|LTR|ERVL-MaLR -54719 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_18_158_-0.712518751887465_6.95662357934062_3.50061084194519 chr4 95194704 95195085 + 3.50061084194519 NA Intergenic Intergenic -142672 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding unique_peak2_18_158_-0.712518751887465_6.95662357934062_3.50061084194519 chr1 54659990 54660805 + 3.50061084194519 NA intron (NM_001081433, intron 21 of 27) intron (NM_001081433, intron 21 of 27) -102713 NM_001163314 241062 Mm.103539 NM_175508 ENSMUSG00000073678 Pgap1 5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto post-GPI attachment to proteins 1 protein-coding common_peak1_13_119_-0.846938156776949_6.48342151722004_3.50030175129851 chrX 59567384 59567755 + 3.50030175129851 NA intron (NM_001290414, intron 1 of 6) CpG 18003 NM_001290414 14168 Mm.7995 NM_010200 ENSMUSG00000031137 Fgf13 Fhf2 fibroblast growth factor 13 protein-coding common_peak1_141_1335_-0.223932435440679_10.2717380747537_3.49974107835119 chr4 134930388 134931731 + 3.49974107835119 NA promoter-TSS (NM_026780) promoter-TSS (NM_026780) 79 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding common_peak1_59_297_0.416100223321898_8.42721863212311_3.49956592454155 chr1 156473732 156474763 + 3.49956592454155 NA promoter-TSS (NM_009230) promoter-TSS (NM_009230) 81 NM_009230 20652 Mm.28099 NM_009230 ENSMUSG00000026600 Soat1 8430426K15Rik|ACAT-1|AW550831|Acact|ald|hid sterol O-acyltransferase 1 protein-coding common_peak2_54_467_-0.389073701197489_8.67582786898466_3.49926036078818 chr13 55634839 55635816 + 3.49926036078818 NA intron (NM_001282055, intron 1 of 22) CpG 328 NM_001282055 212880 Mm.202725 NM_145975 ENSMUSG00000021500 Ddx46 2200005K02Rik|8430438J23Rik|AI325430|AI957095|mKIAA0801 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 protein-coding common_peak1_48_413_-0.41661072058864_8.485181597205_3.49822433949468 chr1 144329440 144330227 + 3.49822433949468 NA Intergenic Intergenic -80729 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak2_48_413_-0.41661072058864_8.485181597205_3.49822433949468 chr9 69120949 69122531 + 3.49822433949468 NA intron (NM_013646, intron 1 of 10) intron (NM_013646, intron 1 of 10) -168101 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding common_peak1_208_2078_-0.177928426333628_10.9327098296916_3.49702664606266 chr12 32953484 32955239 + 3.49702664606266 NA promoter-TSS (NR_044986) promoter-TSS (NR_044986) 175 NM_198710 19027 Mm.246304 NM_013635 ENSMUSG00000020570 Sypl AI314763|AI604763|D12Ertd446e|PanI|Pphn|Sypl1 synaptophysin-like protein protein-coding common_peak1_92_830_-0.287887945882755_9.55476069382897_3.49674771241959 chr19 6057929 6058748 + 3.49674771241959 NA promoter-TSS (NM_026246) promoter-TSS (NM_026246) 371 NM_001190436 14109 Mm.329631 NM_007990 ENSMUSG00000038274 Fau MNSFbeta Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) protein-coding common_peak1_26_90_0.714412926640899_6.86500110351915_3.49668047571856-2 chr4 148041377 148042009 + 3.49668047571856 NA non-coding (NR_027809, exon 2 of 13) non-coding (NR_027809, exon 2 of 13) 504 NM_001161798 17769 Mm.89959 NM_010840 ENSMUSG00000029009 Mthfr AI323986 5,10-methylenetetrahydrofolate reductase protein-coding common_peak1_26_90_0.714412926640899_6.86500110351915_3.49668047571856 chr2 32121031 32121679 + 3.49668047571856 NA Intergenic Intergenic 25704 NM_145521 227721 Mm.257236 NM_145521 ENSMUSG00000051373 Plpp7 D830019K17Rik|NET39|Ppapdc3 phospholipid phosphatase 7 (inactive) protein-coding unique_peak2_26_90_0.714412926640899_6.86500110351915_3.49668047571856 chr18 56734051 56734851 + 3.49668047571856 NA intron (NM_010721, intron 5 of 10) (TACTG)n|Simple_repeat|Simple_repeat 26638 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak1_195_1930_-0.185031589667254_10.822616654117_3.49613374394407 chr5 33377715 33379604 + 3.49613374394407 NA promoter-TSS (NM_001081101) promoter-TSS (NM_001081101) -37 NM_001081101 71101 Mm.132178 NM_001081101 ENSMUSG00000037355 Uvssa 4933407H18Rik|D330017J19Rik|Kiaa1530|mKIAA1530 UV stimulated scaffold protein A protein-coding common_peak2_47_215_0.485500277114983_7.99763764072096_3.49529262928856 chr11 32570389 32571904 + 3.49529262928856 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 37880 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_124_1155_-0.240804903485975_10.0545232307577_3.4941078391071 chr3 116422842 116424257 + 3.4941078391071 NA 5' UTR (NM_001080818, exon 1 of 16) 5' UTR (NM_001080818, exon 1 of 16) 483 NM_001080818 229776 Mm.17647 NM_001080818 ENSMUSG00000033502 Cdc14a A830059A17Rik|CDC14A2|CDC14a1|Cdc14 CDC14 cell division cycle 14A protein-coding common_peak2_60_304_0.411854018596724_8.45859244174861_3.49403837594897 chr1 183802969 183804790 + 3.49403837594897 NA Intergenic Intergenic 230119 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak2_60_304_0.411854018596724_8.45859244174861_3.49403837594897-2 chr5 73248434 73250451 + 3.49403837594897 NA intron (NM_028194, intron 1 of 62) intron (NM_028194, intron 1 of 62) 7176 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_140_1324_-0.224511040758621_10.2595211239586_3.49339800554368 chr1 160906431 160907722 + 3.49339800554368 NA intron (NM_001024952, intron 1 of 19) CpG 665 NM_001024952 381305 Mm.329667 NM_001024952 ENSMUSG00000040423 Rc3h1 5730557L09Rik|Gm551|N28103|mKIAA2025 RING CCCH (C3H) domains 1 protein-coding common_peak2_113_721_0.275256003849361_9.63348302881185_3.49289467273656 chr10 19933516 19935329 + 3.49289467273656 NA promoter-TSS (NM_008580) promoter-TSS (NM_008580) -104 NM_008580 26408 Mm.6595 NM_008580 ENSMUSG00000071369 Map3k5 7420452D20Rik|ASK|ASK1|MAPKKK5|Mekk5 mitogen-activated protein kinase kinase kinase 5 protein-coding common_peak2_167_1210_0.215328427663238_10.3496473635259_3.49283068674082 chr6 91682573 91685308 + 3.49283068674082 NA promoter-TSS (NM_009320) promoter-TSS (NM_009320) -127 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak1_252_2069_0.166427164834674_11.098628634804_3.49258081180285 chr5 62764385 62766994 + 3.49258081180285 NA intron (NM_178407, intron 1 of 32) intron (NM_178407, intron 1 of 32) 488 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak2_28_101_0.676237972541073_7.01054432824203_3.49255042721168 chr6 58640114 58640951 + 3.49255042721168 NA intron (NM_011920, intron 1 of 15) CpG 43860 NM_011920 26357 Mm.333096 NM_011920 ENSMUSG00000029802 Abcg2 ABC15|ABCP|AI428558|BCRP|Bcrp1|MXR|MXR1 ATP-binding cassette, sub-family G (WHITE), member 2 protein-coding common_peak2_40_342_-0.460621501107387_8.19175401561912_3.49212193029147 chr10 56228288 56229442 + 3.49212193029147 NA promoter-TSS (NM_001033385) promoter-TSS (NM_001033385) -176 NM_001033385 544696 Mm.411188 NM_001033385 ENSMUSG00000038122 Tbc1d32 Bromi|D630037F22Rik|b2b2284Clo TBC1 domain family, member 32 protein-coding common_peak1_184_1805_-0.190692939391127_10.7232357077853_3.49156157417411 chr11 69121063 69123540 + 3.49156157417411 NA intron (NM_033041, intron 3 of 3) CpG 1848 NM_033041 84653 Mm.98505 NM_033041 ENSMUSG00000023781 Hes7 bHLHb37 hairy and enhancer of split 7 (Drosophila) protein-coding common_peak1_31_265_-0.532416861189665_7.78907400490636_3.49152696530829 chr10 79691093 79691721 + 3.49152696530829 NA intron (NR_126325, intron 1 of 3) B1_Mus2|SINE|Alu 2387 NM_008504 16904 Mm.378960 NM_008504 ENSMUSG00000054206 Gzmm Lmet1|MMET-1 granzyme M (lymphocyte met-ase 1) protein-coding unique_peak2_31_265_-0.532416861189665_7.78907400490636_3.49152696530829 chr1 54828059 54829761 + 3.49152696530829 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 97477 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_31_265_-0.532416861189665_7.78907400490636_3.49152696530829 chr6 124903603 124904354 + 3.49152696530829 NA TTS (NM_008479) TTS (NM_008479) 7727 NM_008479 16768 Mm.4528 NM_008479 ENSMUSG00000030124 Lag3 CD223|LAG-3|Ly66 lymphocyte-activation gene 3 protein-coding unique_peak2_31_265_-0.532416861189665_7.78907400490636_3.49152696530829-2 chr12 3780410 3782213 + 3.49152696530829 NA TTS (NM_007886) TTS (NM_007886) -25669 NM_007872 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding common_peak2_240_2450_-0.16330327361219_11.1775031320607_3.49139453165516 chr11 94209595 94212655 + 3.49139453165516 NA promoter-TSS (NM_009427) promoter-TSS (NM_009427) -329 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 protein-coding common_peak2_64_560_-0.354942440275897_8.95438574047084_3.49129243598792 chr3 154203204 154205856 + 3.49129243598792 NA intron (NM_001081263, intron 2 of 21) intron (NM_001081263, intron 2 of 21) 126030 NM_010713 16875 Mm.15530 NM_010713 ENSMUSG00000096225 Lhx8 L3|Lhx7 LIM homeobox protein 8 protein-coding common_peak1_53_255_0.448819878025951_8.22440993901298_3.49065646895728 chr19 46656307 46657207 + 3.49065646895728 NA 3' UTR (NM_001177813, exon 4 of 4) 3' UTR (NM_001177813, exon 4 of 4) 16243 NM_007809 13074 Mm.1262 NM_007809 ENSMUSG00000003555 Cyp17a1 Cyp17|p450c17 cytochrome P450, family 17, subfamily a, polypeptide 1 protein-coding common_peak1_24_80_0.74616518925176_6.7129325975105_3.48998930818784-4 chr19 43689771 43690279 + 3.48998930818784 NA intron (NM_053103, intron 1 of 12) CpG 336 NM_053103 93685 Mm.248237 NM_053103 ENSMUSG00000025192 Entpd7 1810012B13Rik|1810020C02Rik|2810003F23Rik|LALP1|Lysal2 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding common_peak1_24_80_0.74616518925176_6.7129325975105_3.48998930818784 chr11 51968601 51969124 + 3.48998930818784 NA intron (NM_029976, intron 1 of 2) intron (NM_029976, intron 1 of 2) 1231 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_24_80_0.74616518925176_6.7129325975105_3.48998930818784-6 chr9 92289968 92290596 + 3.48998930818784 NA intron (NM_008880, intron 4 of 7) intron (NM_008880, intron 4 of 7) 14680 NM_001195084 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding common_peak1_24_80_0.74616518925176_6.7129325975105_3.48998930818784-3 chr17 6741556 6742106 + 3.48998930818784 NA intron (NM_009510, intron 9 of 12) intron (NM_009510, intron 9 of 12) 36001 NM_183368 83672 Mm.442201 NM_031395 ENSMUSG00000041831 Sytl3 A430092N21|Slp3|Slp3-a|Slp3-b|mFLJ00307 synaptotagmin-like 3 protein-coding common_peak1_24_80_0.74616518925176_6.7129325975105_3.48998930818784-5 chr7 122312016 122312587 + 3.48998930818784 NA intron (NM_001316672, intron 2 of 16) L1ME3G|LINE|L1 23176 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak1_24_80_0.74616518925176_6.7129325975105_3.48998930818784-2 chr14 22020511 22021010 + 3.48998930818784 NA intron (NM_028275, intron 1 of 6) intron (NM_028275, intron 1 of 6) 1048 NM_028275 76633 Mm.489898 NM_028275 ENSMUSG00000063458 1700112E06Rik 2700009F18Rik RIKEN cDNA 1700112E06 gene protein-coding common_peak1_24_80_0.74616518925176_6.7129325975105_3.48998930818784-7 chr9 110100684 110101151 + 3.48998930818784 NA exon (NM_001252683, exon 1 of 19) exon (NM_001252683, exon 1 of 19) 170 NM_001252683 72831 Mm.276305 NM_133347 ENSMUSG00000032480 Dhx30 2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein-coding common_peak2_61_311_0.407892297058414_8.48934836739146_3.48934429947841 chr19 57357267 57359063 + 3.48934429947841 NA intron (NR_040316, intron 1 of 2) HAL1|LINE|L1 2734 NR_040316 320879 Mm.375089 NR_040316 ENSMUSG00000097785 B230217O12Rik - RIKEN cDNA B230217O12 gene ncRNA common_peak2_278_2349_0.156506195588511_11.2766981392466_3.48900018737599 chr2 57122538 57125109 + 3.48900018737599 NA intron (NM_001139509, intron 1 of 7) CpG 180 NM_001139509 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak2_248_2544_-0.159809555641425_11.2335451631423_3.48897527822517 chr5 113906332 113908870 + 3.48897527822517 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 1105 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_15_38_1.01085104426292_5.79082774099371_3.48811054743252 chr16 11473647 11474020 + 3.48811054743252 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 68185 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding unique_peak1_15_38_1.01085104426292_5.79082774099371_3.48811054743252-2 chr6 67351204 67351665 + 3.48811054743252 NA intron (NM_008354, intron 6 of 15) intron (NM_008354, intron 6 of 15) -11740 NM_001311141 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding unique_peak1_15_38_1.01085104426292_5.79082774099371_3.48811054743252 chr16 30599543 30600027 + 3.48811054743252 NA promoter-TSS (NM_177632) promoter-TSS (NM_177632) 62 NM_177632 224093 Mm.28244 NM_177632 ENSMUSG00000046546 Fam43a Tuf1 family with sequence similarity 43, member A protein-coding common_peak2_264_2735_-0.154005162564463_11.3408499336037_3.48724517051823 chr1 80106036 80109815 + 3.48724517051823 NA Intergenic Intergenic 106019 NM_173425 241128 Mm.145511 NM_173425 ENSMUSG00000043230 Fam124b A830043J08Rik family with sequence similarity 124, member B protein-coding common_peak2_33_129_0.607780759132073_7.32625819259449_3.48650375825851 chr16 3847146 3847808 + 3.48650375825851 NA 5' UTR (NM_001081217, exon 1 of 3) 5' UTR (NM_001081217, exon 1 of 3) 254 NM_001081217 385674 Mm.244261 NM_001081217 ENSMUSG00000054939 Zfp174 Gm1754 zinc finger protein 174 protein-coding common_peak2_23_198_-0.622849152451554_7.32520004431787_3.48650375825846 chr19 46075018 46075905 + 3.48650375825846 NA promoter-TSS (NM_001039353) promoter-TSS (NM_001039353) -386 NM_001039352 70769 Mm.402190 NM_053086 ENSMUSG00000015176 Nolc1 NOPP130|NOPP140|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding common_peak2_34_290_-0.503429628384749_7.93316052871591_3.48626528434504 chr11 87109117 87110286 + 3.48626528434504 NA promoter-TSS (NM_175563) promoter-TSS (NM_175563) 440 NM_025377 66140 Mm.45008 NM_025377 ENSMUSG00000020492 Ska2 1110001A07Rik|C78640|Fam33a spindle and kinetochore associated complex subunit 2 protein-coding common_peak1_34_290_-0.503429628384749_7.93316052871591_3.48626528434504 chr2 103662647 103663340 + 3.48626528434504 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 96683 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_62_318_0.404196546186913_8.51951088685833_3.48543264696365-2 chr9 106214818 106216902 + 3.48543264696365 NA TTS (NM_011876) TTS (NM_011876) -6738 NM_031178 81897 Mm.44889 NM_031178 ENSMUSG00000045322 Tlr9 - toll-like receptor 9 protein-coding common_peak2_62_318_0.404196546186913_8.51951088685833_3.48543264696365 chr12 85629014 85630730 + 3.48543264696365 NA intron (NM_001205052, intron 2 of 3) intron (NM_001205052, intron 2 of 3) 29854 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak1_85_760_-0.299413162063241_9.42204606247192_3.48414994524546 chr18 24602959 24603948 + 3.48414994524546 NA promoter-TSS (NM_021448) promoter-TSS (NM_021448) 364 NM_139143 106957 Mm.21688 NM_139143 ENSMUSG00000024270 Slc39a6 Ermelin solute carrier family 39 (metal ion transporter), member 6 protein-coding common_peak2_130_869_0.252215671110783_9.89097942629148_3.48412715121383 chr3 20154035 20155739 + 3.48412715121383 NA intron (NM_013755, intron 1 of 6) CpG 229 NM_013755 27357 Mm.6375 NM_013755 ENSMUSG00000019528 Gyg AU017667|Gyg1 glycogenin protein-coding common_peak2_37_316_-0.481362515556161_8.06765777236133_3.48299786471655 chr10 37336837 37338803 + 3.48299786471655 NA Intergenic Intergenic -198894 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak1_63_325_0.400749731266803_8.54910301986448_3.48225645928887-2 chr18 39369082 39369907 + 3.48225645928887 NA intron (NM_175164, intron 22 of 22) intron (NM_175164, intron 22 of 22) 117751 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak1_63_325_0.400749731266803_8.54910301986448_3.48225645928887 chr13 113635427 113636696 + 3.48225645928887 NA Intergenic Intergenic -17497 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak1_67_588_-0.345362940483577_9.02944235358867_3.4822378561644 chr15 102278928 102280003 + 3.4822378561644 NA promoter-TSS (NM_134100) promoter-TSS (NM_134100) 9 NM_134100 106073 Mm.287740 NM_134100 ENSMUSG00000045665 Mfsd5 AA409375|AW556797|D15Mgi27 major facilitator superfamily domain containing 5 protein-coding common_peak1_133_1249_-0.230556368213369_10.1724341954428_3.48145519072537 chr6 108548448 108550578 + 3.48145519072537 NA intron (NM_010585, intron 61 of 61) U6|snRNA|snRNA 59770 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_99_899_-0.274541376707942_9.67651050286307_3.48102306208518 chr11 83190621 83192529 + 3.48102306208518 NA intron (NM_011409, intron 1 of 2) intron (NM_011409, intron 1 of 2) 245 NM_011409 20557 Mm.290922 NM_011409 ENSMUSG00000018986 Slfn3 - schlafen 3 protein-coding common_peak2_143_1356_-0.221682709987119_10.2953636504253_3.48066438884607 chr4 136176741 136180691 + 3.48066438884607 NA intron (NM_177733, intron 2 of 6) MIRc|SINE|MIR -2066 NM_001305399 242705 Mm.307932 NM_177733 ENSMUSG00000018983 E2f2 E2F-2 E2F transcription factor 2 protein-coding common_peak1_29_248_-0.551345499470377_7.68432918233289_3.48021588045162 chr9 32489576 32490184 + 3.48021588045162 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 51572 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_348_3772_-0.130396087545842_11.8162983410372_3.47930004491263 chr8 70607871 70612055 + 3.47930004491263 NA Intergenic Intergenic -1649 NM_133772 76900 Mm.6667 NM_133772 ENSMUSG00000070003 Ssbp4 1210002E11Rik|AW743380|Sspb4 single stranded DNA binding protein 4 protein-coding common_peak1_91_539_0.314869829415391_9.23425051175853_3.47929332633182 chr13 54564600 54565852 + 3.47929332633182 NA 5' UTR (NM_133797, exon 1 of 9) 5' UTR (NM_133797, exon 1 of 9) 156 NM_001252647 97820 Mm.24593 NM_133797 ENSMUSG00000025871 4833439L19Rik 4930558H15Rik|C81457|Kiaa1191|P33monox RIKEN cDNA 4833439L19 gene protein-coding common_peak2_314_2749_0.144498843530718_11.4974653250647_3.47878045253093 chr3 16182576 16185153 + 3.47878045253093 NA intron (NR_027375, intron 1 of 5) intron (NR_027375, intron 1 of 5) 681 NM_001145919 229096 Mm.23834 NM_172677 ENSMUSG00000047213 Ythdf3 9130022A11Rik YTH domain family 3 protein-coding common_peak2_57_494_-0.376009089268047_8.76328017033295_3.47875830781611 chr2 11652717 11654340 + 3.47875830781611 NA intron (NM_008367, intron 1 of 7) intron (NM_008367, intron 1 of 7) 10736 NM_008367 16184 Mm.915 NM_008367 ENSMUSG00000026770 Il2ra CD25|Il2r|Ly-43 interleukin 2 receptor, alpha chain protein-coding common_peak1_70_616_-0.3359671333024_9.10114311249822_3.47760879575166 chr6 124712274 124713075 + 3.47760879575166 NA promoter-TSS (NM_013536) promoter-TSS (NM_013536) 385 NM_007531 12034 Mm.36241 NM_007531 ENSMUSG00000004264 Phb2 AU044498|BAP|Bap37|Bcap37|REA prohibitin 2 protein-coding common_peak1_27_231_-0.571416245109647_7.57227287257275_3.47729955368725 chr19 8967121 8967745 + 3.47729955368725 NA intron (NM_026007, intron 1 of 9) intron (NM_026007, intron 1 of 9) 392 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding unique_peak2_27_231_-0.571416245109647_7.57227287257275_3.47729955368725 chr17 25583259 25584648 + 3.47729955368725 NA intron (NR_045520, intron 1 of 8) L1MC|LINE|L1 4779 NR_045520 76483 Mm.12787 NM_029624 ENSMUSG00000002279 Lmf1 2400010G15Rik|AW822050|Tmem112|cld lipase maturation factor 1 protein-coding common_peak2_187_1404_0.200001294690443_10.5563550624535_3.47662173849737 chr10 9900051 9902199 + 3.47662173849737 NA promoter-TSS (NM_001081344) promoter-TSS (NM_001081344) -85 NM_001081344 78808 Mm.331751 NM_030191 ENSMUSG00000019790 Stxbp5 0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006 syntaxin binding protein 5 (tomosyn) protein-coding common_peak1_48_222_0.47597633699038_8.0388880684155_3.47648472460252 chr9 63748900 63749980 + 3.47648472460252 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 8554 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_36_147_0.57033028558246_7.49461850842018_3.47523081269548 chr14 75016036 75016745 + 3.47523081269548 NA intron (NM_198642, intron 1 of 13) CpG 363 NM_198642 271221 Mm.320280 NM_198642 ENSMUSG00000034959 Rubcnl 5031414D18Rik|Gm744|Gm911|Kiaa0226l RUN and cysteine rich domain containing beclin 1 interacting protein like protein-coding common_peak1_36_147_0.57033028558246_7.49461850842018_3.47523081269548-2 chr7 100228761 100229595 + 3.47523081269548 NA intron (NM_027629, intron 1 of 13) L2a|LINE|L2 1571 NM_027629 70974 Mm.440524 NM_027629 ENSMUSG00000030729 Pgm2l1 4931406N15Rik|AI553438|BM32A phosphoglucomutase 2-like 1 protein-coding common_peak1_144_996_0.235319206992694_10.0791092978945_3.47514497941099 chr7 126584647 126586041 + 3.47514497941099 NA intron (NM_138310, intron 1 of 3) intron (NM_138310, intron 1 of 3) 336 NM_138310 171504 Mm.170665 NM_138310 ENSMUSG00000042759 Apobr Apob-48r|Apob48r apolipoprotein B receptor protein-coding common_peak1_375_3452_0.129333402131701_11.8183013199192_3.47490052133762 chr11 76493253 76496483 + 3.47490052133762 NA intron (NM_198018, intron 1 of 21) CpG 14551 NM_198018 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak1_45_386_-0.431116640864545_8.38063143571214_3.47488282074041 chr3 130730437 130730963 + 3.47488282074041 NA promoter-TSS (NM_026724) promoter-TSS (NM_026724) -302 NM_001005859 68436 Mm.140568 NM_026724 ENSMUSG00000062006 Rpl34 1100001I22Rik ribosomal protein L34 protein-coding common_peak2_76_673_-0.319883240408792_9.23666316097746_3.47403181205929 chr7 126486457 126488466 + 3.47403181205929 NA exon (NM_001163713, exon 1 of 9) exon (NM_001163713, exon 1 of 9) 106 NM_001163713 233870 Mm.197829 NM_172745 ENSMUSG00000073838 Tufm 2300002G02Rik|C76308|C76389|EF-TuMT|EFTU Tu translation elongation factor, mitochondrial protein-coding common_peak2_117_756_0.267989226242449_9.69814410310696_3.47382748634294 chr13 95324397 95326478 + 3.47382748634294 NA intron (NM_028106, intron 1 of 1) CpG 612 NM_028106 72114 Mm.3774 NM_028106 ENSMUSG00000041995 Zbed3 0610037K01Rik|2610005H11Rik|AU018975|AU024588 zinc finger, BED type containing 3 protein-coding unique_peak1_11_22_1.26360120084873_5.15536255648138_3.47380072378139 chr10 93341368 93341724 + 3.47380072378139 NA intron (NR_038014, intron 1 of 2) RMER17B|LTR|ERVK 5314 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak2_89_523_0.319367947213538_9.19310697514422_3.47366880710263 chr3 27709933 27711576 + 3.47366880710263 NA promoter-TSS (NM_173182) promoter-TSS (NM_173182) -315 NM_173182 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_176_1297_0.20758625319597_10.4458677945971_3.47277535486955 chr8 122555808 122557618 + 3.47277535486955 NA Intergenic Intergenic -5384 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak2_64_333_0.393210227858845_8.58030940640347_3.4714849329651 chrX 159696237 159697995 + 3.4714849329651 NA intron (NM_001135727, intron 2 of 17) intron (NM_001135727, intron 2 of 17) -11485 NM_021389 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_206_1593_0.188293922409606_10.7325828751953_3.47094191616849 chr13 59668084 59670322 + 3.47094191616849 NA intron (NM_001035122, intron 1 of 9) PB1D10|SINE|Alu 6581 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding common_peak1_65_340_0.390304329823064_8.6087800939357_3.46981685097594 chr11 98478293 98479357 + 3.46981685097594 NA intron (NM_011771, intron 6 of 7) B4A|SINE|B4 31991 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak2_55_269_0.43636146415345_8.29499632912756_3.46971659687058 chr6 112851850 112853445 + 3.46971659687058 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 94619 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding unique_peak2_17_150_-0.733719377452411_6.87154505059887_3.4696072497118 chr10 13007845 13008325 + 3.4696072497118 NA promoter-TSS (NM_175102) promoter-TSS (NM_175102) -365 NM_175102 66125 Mm.29743 NM_175102 ENSMUSG00000078348 Sf3b5 10kDa|1110005L13Rik|AU043053|Sf3b10 splicing factor 3b, subunit 5 protein-coding common_peak1_17_150_-0.733719377452411_6.87154505059887_3.4696072497118 chr16 49806926 49807500 + 3.4696072497118 NA Intergenic Intergenic -48441 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_41_351_-0.455344663652442_8.23175928681108_3.46950173718855 chr7 128179558 128180263 + 3.46950173718855 NA intron (NM_001029872, intron 5 of 30) GA-rich|Low_complexity|Low_complexity 5964 NM_001029872 381924 Mm.334257 NM_001029872 ENSMUSG00000070369 Itgad Cd11d integrin, alpha D protein-coding unique_peak2_41_351_-0.455344663652442_8.23175928681108_3.46950173718855 chr6 99188106 99189634 + 3.46950173718855 NA intron (NM_001197321, intron 2 of 17) intron (NM_001197321, intron 2 of 17) 77645 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_168_1220_0.213966363542006_10.3608306667584_3.46856872770291 chr4 150568742 150570860 + 3.46856872770291 NA intron (NM_001085492, intron 11 of 22) CpG 82373 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak2_122_799_0.261721591443985_9.77471698549672_3.46750856451901 chr11 54971845 54974821 + 3.46750856451901 NA Intergenic Intergenic -10393 NM_001271455 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding unique_peak2_38_324_-0.471352458307956_8.10861967876184_3.46697850991238 chr4 135164190 135166135 + 3.46697850991238 NA intron (NM_019732, intron 4 of 5) intron (NM_019732, intron 4 of 5) 44517 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak1_38_324_-0.471352458307956_8.10861967876184_3.46697850991238 chr1 164248388 164248902 + 3.46697850991238 NA promoter-TSS (NM_001276455) promoter-TSS (NM_001276455) -401 NM_054087 116914 Mm.35444 NM_054087 ENSMUSG00000040918 Slc19a2 AV276020|AW322295|DDA1|THTR1|TRMA solute carrier family 19 (thiamine transporter), member 2 protein-coding common_peak1_58_504_-0.374613172597332_8.79283299134049_3.46629142459244-2 chr15 81513412 81514312 + 3.46629142459244 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 47546 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak1_58_504_-0.374613172597332_8.79283299134049_3.46629142459244 chr1 133660616 133661408 + 3.46629142459244 NA promoter-TSS (NM_001166552) promoter-TSS (NM_001166552) -127 NM_001166552 667118 Mm.245357 NM_001166552 ENSMUSG00000094410 Zbed6 Gm8466|MGR zinc finger, BED type containing 6 protein-coding unique_peak2_35_298_-0.492704001139082_7.97764967362856_3.4651871859663 chr5 149593166 149595091 + 3.4651871859663 NA intron (NM_029440, intron 16 of 22) intron (NM_029440, intron 16 of 22) 42187 NM_013559 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding common_peak1_35_298_-0.492704001139082_7.97764967362856_3.4651871859663 chr6 28479320 28480143 + 3.4651871859663 NA promoter-TSS (NM_019776) promoter-TSS (NM_019776) -617 NM_019776 56463 Mm.439987 NM_019776 ENSMUSG00000001424 Snd1 AL033314|Tudor-SN staphylococcal nuclease and tudor domain containing 1 protein-coding unique_peak2_40_171_0.535178510363328_7.69385400988376_3.46489851131455 chr11 53818110 53819593 + 3.46489851131455 NA intron (NR_033332, intron 2 of 3) intron (NR_033332, intron 2 of 3) 40405 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA unique_peak2_32_273_-0.520712135299648_7.8376760153107_3.46438079272903 chr19 60211998 60213482 + 3.46438079272903 NA exon (NM_029648, exon 6 of 8) exon (NM_029648, exon 6 of 8) 13957 NM_029648 76539 Mm.290183 NM_029648 ENSMUSG00000057858 Fam204a 2310065H12Rik|2610015K05Rik|D19Ertd737e family with sequence similarity 204, member A protein-coding common_peak1_166_1605_-0.202509571829355_10.5480013916026_3.46427261126998 chr11 59838864 59839920 + 3.46427261126998 NA intron (NM_011991, intron 1 of 11) CpG 375 NM_011991 26572 Mm.40 NM_011991 ENSMUSG00000019373 Cops3 Csn3|Sgn3 COP9 signalosome subunit 3 protein-coding common_peak1_21_65_0.815403623335498_6.4520959310262_3.46413209163029 chr17 28702339 28702760 + 3.46413209163029 NA intron (NM_001168514, intron 2 of 12) intron (NM_001168514, intron 2 of 12) 9981 NM_001168513 26416 Mm.311337 NM_011951 ENSMUSG00000053436 Mapk14 CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha mitogen-activated protein kinase 14 protein-coding common_peak1_21_65_0.815403623335498_6.4520959310262_3.46413209163029-3 chr5 143270095 143270441 + 3.46413209163029 NA promoter-TSS (NM_017467) promoter-TSS (NM_017467) -246 NM_017467 54201 Mm.6666 NM_017467 ENSMUSG00000046658 Zfp316 Emzf1|Mzf3|Znf316 zinc finger protein 316 protein-coding common_peak2_21_65_0.815403623335498_6.4520959310262_3.46413209163029 chr12 8853979 8854489 + 3.46413209163029 NA Intergenic Intergenic -67073 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding common_peak1_21_65_0.815403623335498_6.4520959310262_3.46413209163029-2 chr4 43981961 43982363 + 3.46413209163029 NA Intergenic Intergenic -1342 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding common_peak1_94_849_-0.282849240749853_9.58989441065014_3.4621977218928 chr1 172310912 172312307 + 3.4621977218928 NA promoter-TSS (NM_080419) promoter-TSS (NM_080419) -758 NM_080419 140559 Mm.271717 NM_080419 ENSMUSG00000038034 Igsf8 ESTM34|EWI-2|KCT-4|PGRL immunoglobulin superfamily, member 8 protein-coding common_peak2_222_2238_-0.170154938898195_11.0435613434035_3.46164799430939 chr18 82691216 82693838 + 3.46164799430939 NA intron (NM_177832, intron 1 of 29) C-rich|Low_complexity|Low_complexity 207 NM_177832 329002 Mm.34438 NM_177832 ENSMUSG00000041258 Zfp236 AI447957|Gm335 zinc finger protein 236 protein-coding common_peak1_68_362_0.378769582251044_8.69321052912127_3.4606860358455 chr14 66296905 66298121 + 3.4606860358455 NA promoter-TSS (NR_038077) promoter-TSS (NR_038077) -384 NR_038077 69303 Mm.352258 NR_038077 ENSMUSG00000085984 1700001G11Rik - RIKEN cDNA 1700001G11 gene ncRNA common_peak1_14_34_1.05276110446638_5.65566356917816_3.4600272876225 chr2 181188500 181188899 + 3.4600272876225 NA TTS (NM_025598) TTS (NM_025598) 1356 NM_025598 66496 Mm.213943 NM_025598 ENSMUSG00000016344 Ppdpf 0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik pancreatic progenitor cell differentiation and proliferation factor protein-coding common_peak1_14_34_1.05276110446638_5.65566356917816_3.4600272876225-2 chr7 142463623 142464034 + 3.4600272876225 NA intron (NM_001271509, intron 1 of 10) intron (NM_001271509, intron 1 of 10) 3016 NM_001136071 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding unique_peak1_14_34_1.05276110446638_5.65566356917816_3.4600272876225 chr12 108653918 108654343 + 3.4600272876225 NA intron (NM_007965, intron 3 of 12) intron (NM_007965, intron 3 of 12) -4490 NR_029771 723909 NR_029771 ENSMUSG00000065436 Mir342 Mirn342|mmu-mir-342 microRNA 342 ncRNA unique_peak2_7_73_-1.13981241369014_5.63954715878388_3.4600272876225-2 chr16 32202225 32202816 + 3.4600272876225 NA Intergenic MTE2a|LTR|ERVL-MaLR 22720 NM_001033539 328660 Mm.441006 NM_001033539 ENSMUSG00000075269 Bex6 B020003O03Rik brain expressed family member 6 protein-coding common_peak1_14_34_1.05276110446638_5.65566356917816_3.4600272876225-3 chr9 113704066 113704425 + 3.4600272876225 NA intron (NM_001164678, intron 1 of 17) URR1A|DNA|hAT-Charlie 4014 NM_001164678 18571 Mm.29816 NM_011052 ENSMUSG00000032504 Pdcd6ip AI480591|AW544830|Aip1|Alix|C76364|Eig2|mKIAA1375 programmed cell death 6 interacting protein protein-coding unique_peak2_7_73_-1.13981241369014_5.63954715878388_3.4600272876225 chr13 38038253 38038781 + 3.4600272876225 NA intron (NM_024242, intron 1 of 16) intron (NM_024242, intron 1 of 16) 1528 NM_024242 71340 Mm.297130 NM_024242 ENSMUSG00000021428 Riok1 3110046C13Rik|5430416A05Rik|Ad034 RIO kinase 1 (yeast) protein-coding common_peak1_20_174_-0.673736468033831_7.11434287781541_3.459904759453-2 chr5 105696303 105696834 + 3.459904759453 NA Intergenic ID_B1|SINE|B4 -3401 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding unique_peak2_20_174_-0.673736468033831_7.11434287781541_3.459904759453-2 chr9 42075922 42077100 + 3.459904759453 NA intron (NM_011436, intron 6 of 47) Lx8|LINE|L1 47778 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding unique_peak2_20_174_-0.673736468033831_7.11434287781541_3.459904759453 chr11 48857641 48858740 + 3.459904759453 NA Intergenic Intergenic 13156 NM_008326 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47 immunity-related GTPase family M member 1 protein-coding common_peak2_20_174_-0.673736468033831_7.11434287781541_3.459904759453 chr10 79533151 79533945 + 3.459904759453 NA intron (NM_001302389, intron 1 of 5) CpG 239 NM_001302442 50784 Mm.28873 NM_015817 ENSMUSG00000052151 Plpp2 Lpp2|PAP2-G|PAP2-gamma|PAP2c|Ppap2c phospholipid phosphatase 2 protein-coding common_peak1_20_174_-0.673736468033831_7.11434287781541_3.459904759453 chr15 62104697 62105233 + 3.459904759453 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 65708 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 plasmacytoma variant translocation 1 ncRNA common_peak2_142_978_0.237025296978732_10.0536776980931_3.45957295562773 chr11 86543965 86545783 + 3.45957295562773 NA promoter-TSS (NM_001199047) promoter-TSS (NM_001199047) -67 NM_001114334 72508 Mm.394280 NM_028259 ENSMUSG00000020516 Rps6kb1 2610318I15Rik|4732464A07Rik|70kDa|AA959758|AI256796|AI314060|S6K1|p70/85s6k|p70s6k ribosomal protein S6 kinase, polypeptide 1 protein-coding common_peak1_187_1838_-0.188350054613206_10.7505307371053_3.45955815585493 chr19 14596717 14598169 + 3.45955815585493 NA promoter-TSS (NM_001302951) promoter-TSS (NM_001302951) -230 NM_001302951 21888 Mm.103638 NM_011600 ENSMUSG00000024642 Tle4 5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4 transducin-like enhancer of split 4 protein-coding common_peak2_381_4193_-0.123127328923442_11.9725474816349_3.45941726870485 chr4 150236146 150241425 + 3.45941726870485 NA intron (NM_001025388, intron 1 of 11) intron (NM_001025388, intron 1 of 11) 1461 NM_001025388 433182 Mm.70666 NM_001025388 ENSMUSG00000059040 Eno1b EG433182|Eno1|Gm5506 enolase 1B, retrotransposed protein-coding common_peak1_46_395_-0.426225532653593_8.41624385375281_3.45920188111485 chr19 8756463 8756995 + 3.45920188111485 NA promoter-TSS (NM_016813) promoter-TSS (NM_016813) 240 NR_132423 102640359 Mm.440831 NR_132423 LOC102640359 - uncharacterized LOC102640359 ncRNA common_peak1_46_395_-0.426225532653593_8.41624385375281_3.45920188111485-4 chr5 30888435 30889354 + 3.45920188111485 NA promoter-TSS (NM_001048192) promoter-TSS (NM_001048192) -41 NR_122117 231093 Mm.440364 NM_174849 ENSMUSG00000029165 Agbl5 9430057O19Rik|CCP5 ATP/GTP binding protein-like 5 protein-coding common_peak1_46_395_-0.426225532653593_8.41624385375281_3.45920188111485-2 chr4 117886769 117887414 + 3.45920188111485 NA intron (NM_033617, intron 1 of 7) CpG 238 NM_033617 114143 Mm.207052 NM_033617 ENSMUSG00000033379 Atp6v0b 2310024H13Rik|Atp6f|VMA16 ATPase, H+ transporting, lysosomal V0 subunit B protein-coding common_peak1_46_395_-0.426225532653593_8.41624385375281_3.45920188111485-3 chr4 126752519 126753448 + 3.45920188111485 NA promoter-TSS (NM_133886) promoter-TSS (NM_133886) 446 NM_011986 26562 Mm.206206 NM_011986 ENSMUSG00000028833 Ncdn AU042419|MMS10-AE|Ms10ae|mKIAA0607|norbin neurochondrin protein-coding common_peak1_93_839_-0.284502119053748_9.57199445813925_3.4590059144394 chr1 86582143 86583015 + 3.4590059144394 NA promoter-TSS (NM_008801) promoter-TSS (NM_008801) -78 NM_008801 18582 Mm.12925 NM_008801 ENSMUSG00000026239 Pde6d AI841218|PrBP/delta phosphodiesterase 6D, cGMP-specific, rod, delta protein-coding common_peak2_98_596_0.299867342549359_9.37152079253949_3.45892741969435 chr19 33391291 33392669 + 3.45892741969435 NA 5' UTR (NM_001146342, exon 1 of 5) 5' UTR (NM_001146342, exon 1 of 5) 315 NM_001167818 67795 Mm.204591 NM_001146342 ENSMUSG00000071573 Rnls 6530404N21Rik|AI452315|AW060440|C10orf59 renalase, FAD-dependent amine oxidase protein-coding common_peak1_31_118_0.62804781100358_7.20884166880973_3.45854820900437 chr7 30664542 30665059 + 3.45854820900437 NA intron (NM_027999, intron 1 of 18) intron (NM_027999, intron 1 of 18) 194 NM_027999 71909 Mm.290410 NM_027999 ENSMUSG00000078762 Haus5 2310022K01Rik HAUS augmin-like complex, subunit 5 protein-coding common_peak2_60_522_-0.366147685199969_8.84759329364696_3.457916240256 chr11 4159774 4161298 + 3.457916240256 NA promoter-TSS (NM_177616) promoter-TSS (NM_177616) 182 NM_026175 67465 Mm.156914 NM_026175 ENSMUSG00000002129 Sf3a1 1200014H24Rik|5930416L09Rik|AI159724 splicing factor 3a, subunit 1 protein-coding common_peak1_60_522_-0.366147685199969_8.84759329364696_3.457916240256 chr15 89088650 89089589 + 3.457916240256 NA promoter-TSS (NM_027905) promoter-TSS (NM_027905) 12 NM_027905 223776 Mm.44763 NM_027905 ENSMUSG00000035757 Selenoo 1300018J18Rik|Selo selenoprotein O protein-coding common_peak1_18_51_0.899924485255799_6.15040196076899_3.45767268030003-5 chr7 25712056 25712448 + 3.45767268030003 NA 3' UTR (NM_028771, exon 5 of 5) 3' UTR (NM_028771, exon 5 of 5) 6801 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak1_18_51_0.899924485255799_6.15040196076899_3.45767268030003-2 chr13 52978542 52979004 + 3.45767268030003 NA intron (NM_017373, intron 1 of 1) CpG 2266 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_18_51_0.899924485255799_6.15040196076899_3.45767268030003-3 chr16 49873740 49874091 + 3.45767268030003 NA intron (NM_010581, intron 3 of 9) L1M2|LINE|L1 18261 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding unique_peak1_18_51_0.899924485255799_6.15040196076899_3.45767268030003-2 chr16 24487757 24488137 + 3.45767268030003 NA intron (NM_001145952, intron 2 of 11) intron (NM_001145952, intron 2 of 11) 39856 NM_001145952 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_18_51_0.899924485255799_6.15040196076899_3.45767268030003 chr12 100999146 100999629 + 3.45767268030003 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 22381 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak1_18_51_0.899924485255799_6.15040196076899_3.45767268030003-4 chr17 5885334 5885729 + 3.45767268030003 NA intron (NM_025664, intron 1 of 17) intron (NM_025664, intron 1 of 17) 44151 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding unique_peak1_18_51_0.899924485255799_6.15040196076899_3.45767268030003-3 chr4 133039033 133039509 + 3.45767268030003 NA intron (NM_146155, intron 2 of 6) CpG 27765 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding unique_peak1_18_51_0.899924485255799_6.15040196076899_3.45767268030003 chr11 117174941 117175469 + 3.45767268030003 NA Intergenic ORR1E|LTR|ERVL-MaLR -24456 NM_001113486 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_71_384_0.369195348663116_8.77331230991382_3.45699622221484 chr17 71598017 71598948 + 3.45699622221484 NA promoter-TSS (NR_027953) promoter-TSS (NR_027953) -201 NR_027953 68789 Mm.75202 NR_015549 ENSMUSG00000085492 Trmt61b 1110039F03Rik|623451|Gm6431 tRNA methyltransferase 61B ncRNA common_peak2_193_1905_-0.184381729360176_10.8041415392299_3.45452439700838 chr19 14596159 14598325 + 3.45452439700838 NA promoter-TSS (NM_001302951) promoter-TSS (NM_001302951) -29 NM_001302951 21888 Mm.103638 NM_011600 ENSMUSG00000024642 Tle4 5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4 transducin-like enhancer of split 4 protein-coding common_peak1_47_403_-0.417823703473344_8.44929963101512_3.45387982776082 chr6 54992204 54992961 + 3.45387982776082 NA intron (NM_026637, intron 1 of 3) intron (NM_026637, intron 1 of 3) 285 NM_026637 110175 Mm.294708 NM_026637 ENSMUSG00000002797 Ggct A030007L17Rik|AA673177|Gctg|Ggc gamma-glutamyl cyclotransferase protein-coding common_peak1_218_2191_-0.171578540421613_11.0122428127497_3.45353007264368 chr7 142370840 142373492 + 3.45353007264368 NA promoter-TSS (NM_177265) promoter-TSS (NM_177265) 93 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_34_135_0.593982873273195_7.38445427788694_3.45299699030627-2 chr5 114100289 114100988 + 3.45299699030627 NA intron (NM_001033202, intron 1 of 12) CpG 305 NM_001033202 100756 Mm.240421 NM_001033202 ENSMUSG00000029592 Usp30 6330590F17Rik|AI851327|D5Ertd483e ubiquitin specific peptidase 30 protein-coding common_peak1_34_135_0.593982873273195_7.38445427788694_3.45299699030627 chr15 102234228 102234953 + 3.45299699030627 NA TTS (NM_011244) TTS (NM_011244) -2655 NM_013566 16421 Mm.58 NM_013566 ENSMUSG00000001281 Itgb7 Ly69 integrin beta 7 protein-coding common_peak2_346_3115_0.135450478229686_11.6732047571765_3.45292384017366 chr6 31111989 31117073 + 3.45292384017366 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -51438 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_123_1144_-0.241225055877289_10.0405193550457_3.45188550312367 chr2 18390478 18393286 + 3.45188550312367 NA intron (NM_001190817, intron 1 of 12) intron (NM_001190817, intron 1 of 12) 948 NM_001190817 13418 Mm.246674 NM_007869 ENSMUSG00000026740 Dnajc1 4733401K02Rik|AA960110|D230036H06Rik|Dnajl1|ERdj1|ERj1p|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding common_peak1_245_1997_0.167849224612649_11.0482654800987_3.45120498202287 chr2 153345024 153347301 + 3.45120498202287 NA promoter-TSS (NM_001039939) promoter-TSS (NM_001039939) 23 NM_001039939 228790 Mm.330677 NM_001039939 ENSMUSG00000042548 Asxl1 mKIAA0978 additional sex combs like 1 protein-coding common_peak2_74_407_0.357724366318172_8.85128752513058_3.45109164025587 chr7 113207393 113208349 + 3.45109164025587 NA intron (NM_001243048, intron 1 of 16) CpG 406 NM_007489 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak2_90_809_-0.289433055051941_9.51706157024602_3.45071060755857 chr17 28517377 28519734 + 3.45071060755857 NA Intergenic Intergenic -12306 NM_026290 67645 Mm.46170 NM_026290 ENSMUSG00000024223 Armc12 4930511I11Rik|AV041658 armadillo repeat containing 12 protein-coding common_peak2_184_1375_0.201624483387633_10.5270769963959_3.45022056270457 chr4 140960278 140962450 + 3.45022056270457 NA promoter-TSS (NM_023374) promoter-TSS (NM_023374) 93 NM_023374 67680 Mm.246965 NM_023374 ENSMUSG00000009863 Sdhb 0710008N11Rik succinate dehydrogenase complex, subunit B, iron sulfur (Ip) protein-coding common_peak1_63_549_-0.353809922914142_8.92638284695495_3.44979347775221 chr9 118389111 118390133 + 3.44979347775221 NA Intergenic Intergenic -40217 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak1_156_1495_-0.209418825481988_10.4421850471466_3.44931821635472 chr11 120672742 120674193 + 3.44931821635472 NA intron (NM_026877, intron 1 of 15) CpG 494 NM_026877 68938 Mm.294020 NM_026877 ENSMUSG00000025142 Aspscr1 1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG alveolar soft part sarcoma chromosome region, candidate 1 (human) protein-coding common_peak2_96_580_0.30294400995888_9.33386635838397_3.44925627111221 chr17 78834765 78836461 + 3.44925627111221 NA promoter-TSS (NM_001081179) promoter-TSS (NM_001081179) 97 NM_181649 53951 Mm.220253 NM_181649 ENSMUSG00000050668 Gpatch11 2310002B06Rik|C80922|Ccdc75|L26697 G patch domain containing 11 protein-coding common_peak1_222_1757_0.178764518810999_10.8691016145489_3.44923272869186 chr19 5660236 5662669 + 3.44923272869186 NA intron (NM_001164568, intron 1 of 15) intron (NM_001164568, intron 1 of 15) 2255 NM_001164482 20469 Mm.3072 NM_011379 ENSMUSG00000056917 Sipa1 Spa1 signal-induced proliferation associated gene 1 protein-coding common_peak2_143_1355_-0.220619167704609_10.294831879284_3.4488492409552 chr5 116022720 116025276 + 3.4488492409552 NA intron (NM_031869, intron 1 of 6) intron (NM_031869, intron 1 of 6) 430 NM_031869 19079 Mm.458152 NM_031869 ENSMUSG00000029513 Prkab1 1300015D22Rik|AU021155|E430008F22 protein kinase, AMP-activated, beta 1 non-catalytic subunit protein-coding common_peak2_30_256_-0.538942344459572_7.73615337696409_3.44845826303396 chr19 8967085 8968020 + 3.44845826303396 NA intron (NM_026007, intron 1 of 9) intron (NM_026007, intron 1 of 9) 511 NM_026007 67160 Mm.247762 NM_026007 ENSMUSG00000071644 Eef1g 2610301D06Rik|AA407312|EF1G eukaryotic translation elongation factor 1 gamma protein-coding common_peak1_236_1902_0.17217376099258_10.9801467267703_3.44601378129244 chr4 131872700 131874763 + 3.44601378129244 NA promoter-TSS (NM_020587) promoter-TSS (NM_020587) 92 NM_020587 57317 Mm.2478 NM_020587 ENSMUSG00000028911 Srsf4 5730499P16Rik|AW550192|MNCb-2616|SRp75|Sfrs4 serine/arginine-rich splicing factor 4 protein-coding common_peak2_95_572_0.304608761707902_9.31469570961086_3.44473821025449 chr6 129532670 129534010 + 3.44473821025449 NA promoter-TSS (NR_045270) promoter-TSS (NR_045270) -56 NR_045270 100504641 Mm.398286 NR_045270 ENSMUSG00000097675 1700101I11Rik - RIKEN cDNA 1700101I11 gene ncRNA common_peak1_95_572_0.304608761707902_9.31469570961086_3.44473821025449 chr5 139320101 139321572 + 3.44473821025449 NA intron (NM_172723, intron 1 of 10) intron (NM_172723, intron 1 of 10) 4628 NM_172723 231821 Mm.297819 NM_172723 ENSMUSG00000056413 Adap1 4930431P11Rik|Centa1|GC1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding unique_peak1_13_30_1.1057561284447_5.50707437460922_3.44473077378963-2 chr14 72602870 72603313 + 3.44473077378963 NA intron (NM_207636, intron 3 of 25) intron (NM_207636, intron 3 of 25) 106912 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding unique_peak1_13_30_1.1057561284447_5.50707437460922_3.44473077378963-3 chr14 102924576 102925014 + 3.44473077378963 NA Intergenic Intergenic 57837 NR_039592 100628599 NR_039592 ENSMUSG00000092901 Mir5130 mir-5130|mmu-mir-5130|mu-mir-5130 microRNA 5130 ncRNA unique_peak1_13_30_1.1057561284447_5.50707437460922_3.44473077378963 chr1 165690880 165691214 + 3.44473077378963 NA intron (NM_178593, intron 1 of 6) intron (NM_178593, intron 1 of 6) 17047 NM_178593 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding common_peak1_19_165_-0.683905203716148_7.03308682948885_3.44402897382279-2 chr5 3501920 3502448 + 3.44402897382279 NA intron (NM_009873, intron 5 of 7) intron (NM_009873, intron 5 of 7) -41649 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak1_19_165_-0.683905203716148_7.03308682948885_3.44402897382279 chr2 28640511 28640939 + 3.44402897382279 NA promoter-TSS (NM_001289575) promoter-TSS (NM_001289575) -508 NM_001289575 64930 Mm.224354 NM_022887 ENSMUSG00000026812 Tsc1 - tuberous sclerosis 1 protein-coding common_peak1_45_203_0.49264777330837_7.91874922862568_3.44344871608126 chr11 32226539 32227278 + 3.44344871608126 NA intron (NM_010822, intron 1 of 3) PB1D10|SINE|Alu 403 NM_010822 268395 Mm.263161 NM_010822 ENSMUSG00000020287 Mpg 9830006D05|AI326268|APNG|Aag|Mid1 N-methylpurine-DNA glycosylase protein-coding common_peak1_45_203_0.49264777330837_7.91874922862568_3.44344871608126-2 chr2 165692879 165693817 + 3.44344871608126 NA intron (NM_001271962, intron 5 of 15) intron (NM_001271962, intron 5 of 15) 38050 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding common_peak1_16_142_-0.756335075804217_6.78170379887628_3.44252301665769-2 chr6 72880913 72881347 + 3.44252301665769 NA intron (NM_019715, intron 1 of 6) MIR|SINE|MIR 18849 NM_019715 74287 Mm.29194 NM_019715 ENSMUSG00000055239 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 protein-coding common_peak1_16_142_-0.756335075804217_6.78170379887628_3.44252301665769 chr2 126151656 126152088 + 3.44252301665769 NA promoter-TSS (NM_026981) promoter-TSS (NM_026981) 132 NM_029455 75823 Mm.444732 NM_029455 ENSMUSG00000027209 Fam227b 4930525F21Rik family with sequence similarity 227, member B protein-coding unique_peak2_16_142_-0.756335075804217_6.78170379887628_3.44252301665769 chr10 96786852 96787966 + 3.44252301665769 NA Intergenic Intergenic 170408 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_85_759_-0.297516126890642_9.42109754488563_3.44168380074015 chr12 114378625 114379697 + 3.44168380074015 NA Intergenic CpG 90305 NR_106062 102465663 NR_106062 ENSMUSG00000105438 Mir7094-1 mmu-mir-7094-1 microRNA 7094-1 ncRNA common_peak1_39_333_-0.465957753656919_8.15072541564559_3.44151513078445 chr7 44929946 44930522 + 3.44151513078445 NA promoter-TSS (NM_007458) promoter-TSS (NM_007458) -744 NM_001077264 11771 Mm.6877 NM_007458 ENSMUSG00000060279 Ap2a1 Adtaa adaptor-related protein complex 2, alpha 1 subunit protein-coding common_peak1_367_3360_0.130235221530929_11.7797924380735_3.44134686935813 chr1 64119863 64122681 + 3.44134686935813 NA 5' UTR (NM_033563, exon 1 of 4) 5' UTR (NM_033563, exon 1 of 4) 117 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding unique_peak2_26_222_-0.57869233308071_7.51155373337995_3.44055224128961 chr11 46343885 46345112 + 3.44055224128961 NA TTS (NM_001281967) TTS (NM_001281967) -31639 NM_001252459 76884 Mm.154358 NM_133769 ENSMUSG00000020340 Cyfip2 1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168 cytoplasmic FMR1 interacting protein 2 protein-coding common_peak1_26_222_-0.57869233308071_7.51155373337995_3.44055224128961 chr17 88440031 88440653 + 3.44055224128961 NA promoter-TSS (NM_180974) promoter-TSS (NM_180974) -370 NM_180974 14236 Mm.112824 NM_180974 ENSMUSG00000034998 Foxn2 3230402J05Rik|6030465J18Rik|Fkh19|Foxn1|HTLF forkhead box N2 protein-coding unique_peak2_26_222_-0.57869233308071_7.51155373337995_3.44055224128961-2 chr9 118374970 118375680 + 3.44055224128961 NA Intergenic Intergenic -54514 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak1_26_222_-0.57869233308071_7.51155373337995_3.44055224128961-2 chr4 46452872 46453465 + 3.44055224128961 NA intron (NM_130889, intron 1 of 6) intron (NM_130889, intron 1 of 6) 2051 NM_130889 67628 Mm.263913 NM_130889 ENSMUSG00000028333 Anp32b 2410015B15Rik|PAL31|PHAPI2a|Ssp29 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B protein-coding common_peak1_26_222_-0.57869233308071_7.51155373337995_3.44055224128961-3 chr5 23787737 23788271 + 3.44055224128961 NA intron (NM_001310467, intron 1 of 13) intron (NM_001310467, intron 1 of 13) 293 NM_001310467 72772 Mm.133300 NM_177323 ENSMUSG00000028999 Rint1 1500019C06Rik|2810450M21Rik|Rint-1 RAD50 interactor 1 protein-coding common_peak2_94_564_0.306362732972662_9.29528842378888_3.44044326072581 chr4 133573957 133575499 + 3.44044326072581 NA promoter-TSS (NM_172876) promoter-TSS (NM_172876) -17 NM_172876 242691 Mm.40110 NM_172876 ENSMUSG00000028850 Gpatch3 D930035B09Rik|Gpatc3 G patch domain containing 3 protein-coding common_peak1_66_577_-0.344381982350955_9.0027346913252_3.44016758622514 chr4 141864051 141865207 + 3.44016758622514 NA intron (NM_025994, intron 1 of 3) MTD|LTR|ERVL-MaLR 10291 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_28_239_-0.558227281095951_7.62777695506054_3.43989275707763-2 chr5 30869562 30870248 + 3.43989275707763 NA intron (NM_144525, intron 1 of 16) CpG 258 NM_144525 68796 Mm.205169 NM_144525 ENSMUSG00000038828 Tmem214 1110039B18Rik|4921530J21Rik|AI841294|AU018742|C76280 transmembrane protein 214 protein-coding common_peak1_28_239_-0.558227281095951_7.62777695506054_3.43989275707763 chr13 114896071 114896758 + 3.43989275707763 NA intron (NM_008396, intron 2 of 29) intron (NM_008396, intron 2 of 29) 35627 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak2_33_281_-0.509402780238267_7.88484996227966_3.43987055824592 chr4 126046287 126047728 + 3.43987055824592 NA promoter-TSS (NM_025544) promoter-TSS (NM_025544) 79 NM_025544 66407 Mm.195628 NM_025544 ENSMUSG00000028861 Mrps15 1500003E24Rik|2410002B11Rik|Mprs15 mitochondrial ribosomal protein S15 protein-coding common_peak1_241_1955_0.169488500869571_11.018434905387_3.43985713505573 chr4 34550010 34551748 + 3.43985713505573 NA 5' UTR (NM_001007589, exon 1 of 5) 5' UTR (NM_001007589, exon 1 of 5) 264 NM_001007589 433693 Mm.389532 NM_026019 ENSMUSG00000028291 Akirin2 2700059D21Rik|AA114675|AA522011|AU019887|Akirin-2 akirin 2 protein-coding unique_peak2_29_107_0.653768930434235_7.08177196738059_3.43982361035853-2 chr10 60287222 60288216 + 3.43982361035853 NA intron (NM_001146124, intron 1 of 13) intron (NM_001146124, intron 1 of 13) 3258 NM_001146124 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding common_peak1_29_107_0.653768930434235_7.08177196738059_3.43982361035853 chr16 92465696 92466289 + 3.43982361035853 NA exon (NM_001081549, exon 1 of 4) exon (NM_001081549, exon 1 of 4) 177 NM_001081549 54720 Mm.265744 NM_019466 ENSMUSG00000022951 Rcan1 Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding unique_peak2_29_107_0.653768930434235_7.08177196738059_3.43982361035853 chr1 138541685 138542509 + 3.43982361035853 NA intron (NM_001311148, intron 3 of 7) intron (NM_001311148, intron 3 of 7) 77660 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak1_29_107_0.653768930434235_7.08177196738059_3.43982361035853-3 chr2 11652539 11653093 + 3.43982361035853 NA intron (NM_008367, intron 1 of 7) C-rich|Low_complexity|Low_complexity 10024 NM_008367 16184 Mm.915 NM_008367 ENSMUSG00000026770 Il2ra CD25|Il2r|Ly-43 interleukin 2 receptor, alpha chain protein-coding common_peak1_29_107_0.653768930434235_7.08177196738059_3.43982361035853-2 chr17 28513837 28514698 + 3.43982361035853 NA Intergenic Intergenic -16594 NM_026290 67645 Mm.46170 NM_026290 ENSMUSG00000024223 Armc12 4930511I11Rik|AV041658 armadillo repeat containing 12 protein-coding common_peak1_29_107_0.653768930434235_7.08177196738059_3.43982361035853-4 chr9 44874061 44874627 + 3.43982361035853 NA intron (NM_001081049, intron 1 of 35) intron (NM_001081049, intron 1 of 35) 6930 NM_001081049 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak2_43_368_-0.441066952180089_8.30694352997035_3.43978304008062 chr5 100518279 100519267 + 3.43978304008062 NA intron (NM_012001, intron 1 of 9) CpG 464 NM_012001 26891 Mm.957 NM_012001 ENSMUSG00000035297 Cops4 AW208976|D5Ertd774e COP9 signalosome subunit 4 protein-coding common_peak1_22_190_-0.638968023942239_7.25794481606463_3.4395538745352-2 chrX 107250463 107251089 + 3.4395538745352 NA Intergenic Intergenic -5102 NM_001177781 213439 Mm.383562 NM_001033251 ENSMUSG00000073008 Gpr174 Gm376|Lypsr3 G protein-coupled receptor 174 protein-coding common_peak1_22_190_-0.638968023942239_7.25794481606463_3.4395538745352 chr2 150303720 150304213 + 3.4395538745352 NA Intergenic ORR1A4-int|LTR|ERVL-MaLR 46449 NM_001142410 100216455 Mm.484816 NM_001142410 ENSMUSG00000079008 Gm14124 EG640962|ENSMUSG00000074735|Gm10749|OTTMUSG00000015734 predicted gene 14124 protein-coding common_peak2_484_4782_0.109743874255424_12.278572013114_3.43879569283321 chr15 81041486 81047343 + 3.43879569283321 NA intron (NM_153049, intron 2 of 12) intron (NM_153049, intron 2 of 12) 60633 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak2_114_1050_-0.250980562990348_9.912056672467_3.43790305937387 chr13 54621548 54622949 + 3.43790305937387 NA intron (NM_178397, intron 1 of 10) intron (NM_178397, intron 1 of 10) 464 NM_178397 76577 Mm.194459 NM_178397 ENSMUSG00000025873 Faf2 2210404D11Rik|AI462440|Ubxd8|mKIAA0887 Fas associated factor family member 2 protein-coding common_peak2_148_1033_0.230904531792687_10.1294727362113_3.4368810133511 chr11 76481696 76484752 + 3.4368810133511 NA intron (NM_198018, intron 2 of 21) intron (NM_198018, intron 2 of 21) -14759 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding unique_peak2_4_50_-1.43451573671343_4.95516747361478_3.43633107051274 chr6 130061589 130061984 + 3.43633107051274 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) 5472 NM_053153 93970 Mm.333431 NM_053153 Klra18 Ly49r killer cell lectin-like receptor, subfamily A, member 18 protein-coding common_peak1_103_638_0.288973746066649_9.46415899398032_3.43562517097083 chr17 12754265 12755799 + 3.43562517097083 NA intron (NM_010515, intron 1 of 47) intron (NM_010515, intron 1 of 47) 13721 NR_027784 104103 Mm.26553 NR_002853 ENSMUSG00000078247 Airn 2810051F02Rik|2810434M15Rik|AI256653|AI597500|AW049873|Air|B930018I07Rik|D17Ertd663e|IGF2RAS antisense Igf2r RNA ncRNA common_peak2_285_2428_0.152655883132919_11.3224747162023_3.43538319766455 chr5 123013848 123016639 + 3.43538319766455 NA 5' UTR (NM_175423, exon 1 of 2) 5' UTR (NM_175423, exon 1 of 2) 169 NM_175423 109305 Mm.218582 NM_175423 ENSMUSG00000049686 Orai1 D730049H07Rik|Tmem142a|orai-1 ORAI calcium release-activated calcium modulator 1 protein-coding common_peak1_83_740_-0.302630466134623_9.38201449923852_3.43529335663703 chr7 31153903 31155252 + 3.43529335663703 NA Intergenic MTEa|LTR|ERVL-MaLR -3527 NM_027898 52857 Mm.27366 NM_027898 ENSMUSG00000001248 Gramd1a 1300003M23Rik|AI415002|AW547240|D7Bwg0611e GRAM domain containing 1A protein-coding unique_peak2_24_206_-0.607471765362941_7.38975107481785_3.43429917594263 chr18 61399174 61400463 + 3.43429917594263 NA intron (NM_133249, intron 1 of 11) CpG 613 NM_133249 170826 Mm.415302 NM_133249 ENSMUSG00000033871 Ppargc1b 4631412G21Rik|Perc peroxisome proliferative activated receptor, gamma, coactivator 1 beta protein-coding common_peak1_24_206_-0.607471765362941_7.38975107481785_3.43429917594263 chr7 13278224 13278719 + 3.43429917594263 NA promoter-TSS (NM_001083188) promoter-TSS (NM_001083188) 250 NM_177312 321008 Mm.458832 NM_177312 ENSMUSG00000070814 6330408A02Rik - RIKEN cDNA 6330408A02 gene protein-coding common_peak1_24_206_-0.607471765362941_7.38975107481785_3.43429917594263-2 chr8 72361167 72361643 + 3.43429917594263 NA intron (NM_007944, intron 21 of 23) MTC|LTR|ERVL-MaLR 42343 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_67_587_-0.34291146148948_9.02821661409162_3.43400930264011 chr12 86800354 86801590 + 3.43400930264011 NA Intergenic Intergenic 66603 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak1_67_587_-0.34291146148948_9.02821661409162_3.43400930264011-2 chr17 21008739 21009574 + 3.43400930264011 NA intron (NM_145483, intron 1 of 4) CpG 215 NM_145483 224585 Mm.296036 NM_145483 ENSMUSG00000067942 Zfp160 6720480D16Rik|F11|HKr18|HZF5|KR18|mKIAA1611|mszf47 zinc finger protein 160 protein-coding common_peak1_67_587_-0.34291146148948_9.02821661409162_3.43400930264011-3 chr5 64959359 64960341 + 3.43400930264011 NA intron (NM_011604, intron 1 of 1) intron (NM_011604, intron 1 of 1) 184 NM_011604 21899 Mm.42146 NM_011604 ENSMUSG00000051498 Tlr6 - toll-like receptor 6 protein-coding common_peak2_41_178_0.520271177720598_7.74395136612456_3.43382444135434 chr10 25296525 25297647 + 3.43382444135434 NA intron (NM_018747, intron 1 of 7) CpG 2077 NM_018747 432442 Mm.485937 NM_018747 ENSMUSG00000039166 Akap7 6430401D08|AI662165|AKAP15|Akap18|BB170514 A kinase (PRKA) anchor protein 7 protein-coding common_peak1_41_178_0.520271177720598_7.74395136612456_3.43382444135434 chr17 34295256 34296012 + 3.43382444135434 NA Intergenic Intergenic -7863 NM_010378 14960 Mm.235338 NM_010378 ENSMUSG00000036594 H2-Aa Aalpha|H-2Aa|H2Aa|I-Aalpha|IAalpha|Ia-1|Ia1 histocompatibility 2, class II antigen A, alpha protein-coding unique_peak2_27_96_0.686651907830798_6.94323879610253_3.43312834113268 chr12 35799096 35800025 + 3.43312834113268 NA Intergenic Intergenic -104442 NR_045050 71581 Mm.100110 NR_045050 9130015A21Rik 100043575|Gm4527 RIKEN cDNA 9130015A21 gene ncRNA unique_peak2_27_96_0.686651907830798_6.94323879610253_3.43312834113268-2 chr4 126813239 126814278 + 3.43312834113268 NA intron (NM_001035525, intron 3 of 23) intron (NM_001035525, intron 3 of 23) 59988 NM_001035526 100317 Mm.206206 NM_133886 ENSMUSG00000028830 AU040320 A730047D20Rik|AAVR|Kiaa0319l expressed sequence AU040320 protein-coding common_peak2_27_96_0.686651907830798_6.94323879610253_3.43312834113268 chr12 77039396 77040180 + 3.43312834113268 NA Intergenic Intergenic -77540 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak1_27_96_0.686651907830798_6.94323879610253_3.43312834113268 chr10 75060244 75060913 + 3.43312834113268 NA promoter-TSS (NM_001081412) promoter-TSS (NM_001081412) -318 NM_001081412 110279 Mm.333722 NM_001081412 ENSMUSG00000009681 Bcr 5133400C09Rik|AI561783|AI853148|mKIAA3017 breakpoint cluster region protein-coding common_peak2_92_548_0.310154381882391_9.25573952994639_3.43255986128605 chr3 139205153 139206360 + 3.43255986128605 NA promoter-TSS (NM_198659) promoter-TSS (NM_198659) -137 NM_198659 381476 Mm.188334 NM_198659 ENSMUSG00000047940 Stpg2 B930007M17Rik|Gm1017 sperm tail PG rich repeat containing 2 protein-coding unique_peak2_8_80_-1.06177695219831_5.80896152678547_3.43222970735551 chr13 120048178 120048990 + 3.43222970735551 NA intron (NM_001302966, intron 1 of 5) intron (NM_001302966, intron 1 of 5) 3620 NM_001302966 100861753 Mm.165042 NM_001302966 ENSMUSG00000095609 Gm21188 - predicted gene, 21188 protein-coding unique_peak2_8_80_-1.06177695219831_5.80896152678547_3.43222970735551-2 chrX 35899173 35899851 + 3.43222970735551 NA intron (NM_001009947, intron 1 of 52) B3|SINE|B2 10680 NM_001009947 75974 Mm.32873 NM_177745 ENSMUSG00000031093 Dock11 5033414A21Rik|8030476J24|Zizimin2|sph238 dedicator of cytokinesis 11 protein-coding common_peak2_44_376_-0.432242075704032_8.34229967541665_3.43182806708811-2 chrX 74304532 74305982 + 3.43182806708811 NA TTS (NM_018794) TTS (NM_018794) 245 NM_010273 14567 Mm.205830 NM_010273 ENSMUSG00000015291 Gdi1 GDIA|GDIalpha guanosine diphosphate (GDP) dissociation inhibitor 1 protein-coding common_peak2_44_376_-0.432242075704032_8.34229967541665_3.43182806708811 chr8 111029479 111030803 + 3.43182806708811 NA intron (NM_001190786, intron 1 of 11) RLTR31_Mm|LTR|ERVK 1610 NM_001190786 234733 Mm.482176 NM_172284 ENSMUSG00000033658 Ddx19b 2810457M08Rik|4921519L13Rik|AW260119 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b protein-coding common_peak2_226_1799_0.176163555770694_10.9018629691024_3.43160145781901 chr13 96541952 96544329 + 3.43160145781901 NA promoter-TSS (NM_012048) promoter-TSS (NM_012048) 405 NM_023420 68018 Mm.24125 NM_023420 ENSMUSG00000021669 Col4a3bp 2810404O15Rik|9230101K08Rik|AU016711|CERT|GPBP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein-coding common_peak2_251_2061_0.165005164956384_11.0923311998463_3.43115004066639 chr4 34549891 34552362 + 3.43115004066639 NA exon (NM_001007589, exon 1 of 5) exon (NM_001007589, exon 1 of 5) 511 NM_001007589 433693 Mm.389532 NM_026019 ENSMUSG00000028291 Akirin2 2700059D21Rik|AA114675|AA522011|AU019887|Akirin-2 akirin 2 protein-coding common_peak2_75_662_-0.319276234342984_9.21322694294109_3.43094522741688 chr11 116394006 116395744 + 3.43094522741688 NA intron (NM_027258, intron 2 of 18) L2b|LINE|L2 18157 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_75_662_-0.319276234342984_9.21322694294109_3.43094522741688 chr11 107479452 107480150 + 3.43094522741688 NA intron (NM_025894, intron 1 of 10) CpG 273 NM_025894 66997 Mm.491171 NM_025894 ENSMUSG00000020720 Psmd12 1500002F15Rik|AI480719|P55 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 protein-coding common_peak2_51_243_0.451296218264401_8.15638544669509_3.43053770237645 chr11 107188441 107189471 + 3.43053770237645 NA intron (NM_001161329, intron 1 of 17) CpG 425 NM_133702 68979 Mm.294617 NM_133702 ENSMUSG00000018433 Nol11 1500002M01Rik|AU015220|AU019874 nucleolar protein 11 protein-coding common_peak1_110_697_0.276834941155043_9.58550069678718_3.4302628550753 chr4 63389924 63391948 + 3.4302628550753 NA intron (NM_001305432, intron 3 of 20) intron (NM_001305432, intron 3 of 20) 7304 NM_001305432 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak2_80_711_-0.30939134797352_9.32103775697964_3.43001563051579 chr12 54713497 54715499 + 3.43001563051579 NA Intergenic Intergenic -18633 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak1_80_711_-0.30939134797352_9.32103775697964_3.43001563051579 chr8 122443618 122444673 + 3.43001563051579 NA promoter-TSS (NR_028354) promoter-TSS (NR_028354) 489 NR_045696 100689703 Mm.271989 NR_045696 9330133O14Rik - RIKEN cDNA 9330133O14 gene ncRNA common_peak2_105_958_-0.263032928388663_9.7738705408238_3.4297817991705 chr11 115276201 115278047 + 3.4297817991705 NA promoter-TSS (NM_007997) promoter-TSS (NM_007997) -155 NM_007997 14149 Mm.4719 NM_007997 ENSMUSG00000018861 Fdxr - ferredoxin reductase protein-coding common_peak1_40_341_-0.456409249820472_8.18964788997566_3.428921231828-2 chr4 118437372 118438170 + 3.428921231828 NA promoter-TSS (NM_023223) promoter-TSS (NM_023223) -428 NM_023223 107995 Mm.261764 NM_023223 ENSMUSG00000006398 Cdc20 2310042N09Rik|C87100|p55CDC cell division cycle 20 protein-coding common_peak1_40_341_-0.456409249820472_8.18964788997566_3.428921231828 chr15 97825276 97825898 + 3.428921231828 NA intron (NM_001204275, intron 1 of 24) intron (NM_001204275, intron 1 of 24) 6180 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak1_477_4695_0.11050013216888_12.2524667591945_3.4289194743305 chr7 34387570 34390642 + 3.4289194743305 NA intron (NM_025948, intron 1 of 10) CpG 434 NM_025948 67070 Mm.276503 NM_025948 ENSMUSG00000066568 Lsm14a 2700023B17Rik|AA407828|AU017544|Tral LSM14A mRNA processing body assembly factor protein-coding common_peak1_311_2717_0.144450642399539_11.4805550619672_3.42875431304693 chr10 12962305 12964736 + 3.42875431304693 NA intron (NM_029075, intron 1 of 2) intron (NM_029075, intron 1 of 2) 739 NM_029075 74732 Mm.248648 NM_029075 ENSMUSG00000039232 Stx11 5830405C08Rik syntaxin 11 protein-coding common_peak1_49_421_-0.408471685384445_8.51686334601496_3.42854331943604 chr14 20378539 20379590 + 3.42854331943604 NA intron (NM_172379, intron 10 of 11) intron (NM_172379, intron 10 of 11) 9846 NM_134081 108671 Mm.2871 NM_134081 ENSMUSG00000021811 Dnajc9 5330419I01Rik|AU020082 DnaJ heat shock protein family (Hsp40) member C9 protein-coding common_peak1_72_634_-0.328293755273901_9.14646590402258_3.42844554698012 chr14 70276384 70277575 + 3.42844554698012 NA intron (NM_001304992, intron 1 of 12) intron (NM_001304992, intron 1 of 12) 12518 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak2_38_159_0.551015354720498_7.59743577224761_3.42819939499116 chr1 152083307 152084773 + 3.42819939499116 NA intron (NM_197990, intron 1 of 5) intron (NM_197990, intron 1 of 5) 6280 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak1_74_653_-0.322997117208416_9.19164826689387_3.42798518033305 chr12 24651295 24652155 + 3.42798518033305 NA intron (NM_178357, intron 1 of 3) CpG 354 NM_178357 194655 Mm.9616 NM_178357 ENSMUSG00000020653 Klf11 9830142A17|D12Ertd427e|Tieg2|Tieg2b|Tieg3 Kruppel-like factor 11 protein-coding common_peak1_60_305_0.407131608354321_8.46095364686981_3.4270914270012 chr13 12257339 12258220 + 3.4270914270012 NA intron (NM_001081128, intron 1 of 32) CpG 334 NM_001081128 238505 Mm.40335 NM_001081128 ENSMUSG00000021311 Mtr AI894170|D830038K18Rik|MS 5-methyltetrahydrofolate-homocysteine methyltransferase protein-coding common_peak2_57_493_-0.373091605885753_8.7618214286418_3.42620101960059 chr6 115601726 115602851 + 3.42620101960059 NA intron (NM_023290, intron 1 of 7) intron (NM_023290, intron 1 of 7) 350 NM_023290 67027 Mm.101316 NM_023290 ENSMUSG00000000439 Mkrn2 2610002L04Rik|C81377 makorin, ring finger protein, 2 protein-coding common_peak2_253_2082_0.164375881319753_11.1066350647005_3.42539874220982 chr4 116074284 116077007 + 3.42539874220982 NA promoter-TSS (NM_025641) promoter-TSS (NM_025641) 376 NM_153521 230654 Mm.3655 NM_153521 ENSMUSG00000028703 Lrrc41 AA409966|AW555107|D630045E04Rik|D730026A16Rik|MUF1 leucine rich repeat containing 41 protein-coding common_peak1_89_524_0.316617336197503_9.19448228065224_3.42265452000158 chr9 78447911 78448927 + 3.42265452000158 NA exon (NM_026658, exon 1 of 12) exon (NM_026658, exon 1 of 12) 209 NM_026658 68291 Mm.291779 NM_026658 ENSMUSG00000032342 Mto1 2310039H01Rik|5730419A02Rik mitochondrial tRNA translation optimization 1 protein-coding common_peak1_291_2495_0.150141429896092_11.3604729338103_3.4214925030458 chr13 113046058 113050372 + 3.4214925030458 NA intron (NM_001281487, intron 2 of 11) (CCA)n|Simple_repeat|Simple_repeat -1827 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak2_207_1605_0.186002000682686_10.7422571778587_3.42147296234051 chr13 59667901 59670358 + 3.42147296234051 NA intron (NM_001035122, intron 1 of 9) intron (NM_001035122, intron 1 of 9) 6655 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding common_peak1_207_1605_0.186002000682686_10.7422571778587_3.42147296234051 chr2 25271269 25273321 + 3.42147296234051 NA promoter-TSS (NM_175300) promoter-TSS (NM_175300) 123 NM_023464 68475 Mm.21444 NM_023464 ENSMUSG00000026966 Ssna1 1110003H09Rik|1190004J23Rik|AA934184|N14|NA14 SS nuclear autoantigen 1 protein-coding unique_peak2_15_134_-0.780562333925663_6.686534430088_3.42014673246994-2 chr12 111181937 111182665 + 3.42014673246994 NA intron (NR_130987, intron 1 of 3) intron (NR_130987, intron 1 of 3) 2190 NR_130987 78062 Mm.427248 NR_130987 ENSMUSG00000083193 4930595D18Rik - RIKEN cDNA 4930595D18 gene ncRNA unique_peak2_15_134_-0.780562333925663_6.686534430088_3.42014673246994-4 chr7 74697385 74698480 + 3.42014673246994 NA Intergenic Intergenic -143152 NM_001038643 108116 Mm.425467 NM_023908 ENSMUSG00000025790 Slco3a1 5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11 solute carrier organic anion transporter family, member 3a1 protein-coding common_peak1_15_134_-0.780562333925663_6.686534430088_3.42014673246994 chr13 21710128 21710546 + 3.42014673246994 NA Intergenic Intergenic 5806 NM_178199 319185 NM_178199 ENSMUSG00000094338 Hist1h2bl H2b-291a histone cluster 1, H2bl protein-coding unique_peak2_15_134_-0.780562333925663_6.686534430088_3.42014673246994-3 chr6 120482657 120483698 + 3.42014673246994 NA 3' UTR (NM_008359, exon 13 of 13) 3' UTR (NM_008359, exon 13 of 13) 10630 NM_033567 94047 Mm.23088 NM_033567 ENSMUSG00000094626 Cecr6 AW048664 cat eye syndrome chromosome region, candidate 6 protein-coding unique_peak2_15_134_-0.780562333925663_6.686534430088_3.42014673246994 chr1 12864709 12865865 + 3.42014673246994 NA Intergenic Intergenic 125848 NM_172841 240726 Mm.24481 NM_172841 ENSMUSG00000025938 Slco5a1 4732454B15|A630033C23Rik|AA407151 solute carrier organic anion transporter family, member 5A1 protein-coding common_peak1_62_319_0.399681065064421_8.52176862741957_3.42004687105934 chr5 88554404 88555158 + 3.42004687105934 NA exon (NM_023054, exon 1 of 1) exon (NM_023054, exon 1 of 1) 298 NM_023054 65961 Mm.490364 NM_023054 ENSMUSG00000070697 Utp3 2400011K09Rik|AW557551|C87704|Crl1|Crlz1|Sas10 UTP3 small subunit processome component protein-coding common_peak1_88_516_0.318997898449254_9.17351941953956_3.41990982445142 chr1 36309809 36310886 + 3.41990982445142 NA intron (NM_001290727, intron 1 of 5) intron (NM_001290727, intron 1 of 5) 2614 NM_001172205 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding common_peak2_88_516_0.318997898449254_9.17351941953956_3.41990982445142 chr3 9832520 9833732 + 3.41990982445142 NA intron (NM_001195031, intron 1 of 8) CpG 553 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding common_peak2_42_184_0.514345709737639_7.78855431538513_3.41983390934916 chr5 45449615 45450353 + 3.41983390934916 NA intron (NM_024236, intron 1 of 6) CpG 245 NM_024236 110391 Mm.30204 NM_024236 ENSMUSG00000015806 Qdpr 2610008L04Rik|D5Ertd371e|Dhpr|PKU2 quinoid dihydropteridine reductase protein-coding common_peak1_31_264_-0.526982975139038_7.78635706188104_3.41983390934916 chr17 24455484 24456118 + 3.41983390934916 NA promoter-TSS (NR_125990) promoter-TSS (NR_125990) -409 NR_125990 13560 Mm.163132 NM_007893 ENSMUSG00000024137 E4f1 p120E4F|phi-AP3 E4F transcription factor 1 protein-coding common_peak1_108_680_0.280231247517564_9.55162661177085_3.41967926332933 chr2 32881415 32882678 + 3.41967926332933 NA intron (NM_146119, intron 1 of 13) ID_B1|SINE|B4 5912 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_132_889_0.2462387868086_9.92078091925806_3.41850166943978 chr9 120492158 120493270 + 3.41850166943978 NA 5' UTR (NM_026892, exon 1 of 4) 5' UTR (NM_026892, exon 1 of 4) 108 NM_026892 68969 Mm.28753 NM_026892 ENSMUSG00000006941 Eif1b 1500010M16Rik|3110001N14Rik|Gc20 eukaryotic translation initiation factor 1B protein-coding common_peak1_34_289_-0.498463375491401_7.93067740226923_3.41775315846111-2 chr5 124346278 124346929 + 3.41775315846111 NA intron (NM_013812, intron 3 of 3) intron (NM_013812, intron 3 of 3) 8025 NM_013812 13445 Mm.391838 NM_013812 ENSMUSG00000029394 Cdk2ap1 Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein-coding common_peak1_34_289_-0.498463375491401_7.93067740226923_3.41775315846111 chr2 29124354 29124883 + 3.41775315846111 NA promoter-TSS (NM_198033) promoter-TSS (NM_198033) -374 NM_198033 269254 Mm.41867 NM_198033 ENSMUSG00000043535 Setx A130090N03|A930037J23Rik|AOA2|AW060766|Als4|SCAR1|Sen1|mKIAA0625 senataxin protein-coding common_peak1_50_430_-0.403873281961642_8.54960741810828_3.41760284009191 chr15 78462145 78463172 + 3.41760284009191 NA intron (NM_027902, intron 2 of 17) (TCTA)n|Simple_repeat|Simple_repeat 5976 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak2_123_1143_-0.239964509671371_10.0398890819427_3.41741606592192 chr1 88040945 88044564 + 3.41741606592192 NA Intergenic Intergenic -12657 NM_201641 394430 Mm.300095 NM_201641 ENSMUSG00000090165 Ugt1a10 A13|Ugt1a13 UDP glycosyltransferase 1 family, polypeptide A10 protein-coding common_peak1_138_1300_-0.223420465925194_10.2336950137552_3.41614057275996 chr4 126202840 126203692 + 3.41614057275996 NA promoter-TSS (NM_146153) promoter-TSS (NM_146153) -556 NM_146153 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak1_21_181_-0.647996897504745_7.18379619144632_3.41522206229928 chr9 108150329 108150912 + 3.41522206229928 NA intron (NM_007567, intron 1 of 11) intron (NM_007567, intron 1 of 11) 13765 NR_126077 76873 Mm.436935 NR_126077 ENSMUSG00000102224 4930447F24Rik - RIKEN cDNA 4930447F24 gene ncRNA common_peak1_25_86_0.712477748792204_6.79918237024483_3.41449371133196 chr11 60192956 60193489 + 3.41449371133196 NA intron (NM_001037764, intron 2 of 4) intron (NM_001037764, intron 2 of 4) 7395 NR_105886 102465555 NR_105886 ENSMUSG00000098547 Mir6921 Gm27352|mmu-mir-6921 microRNA 6921 ncRNA common_peak1_25_86_0.712477748792204_6.79918237024483_3.41449371133196-2 chr4 53227219 53227784 + 3.41449371133196 NA Intergenic Intergenic -18695 NR_040665 78180 Mm.243847 NR_040665 ENSMUSG00000086947 4930522O17Rik - RIKEN cDNA 4930522O17 gene ncRNA common_peak1_58_503_-0.371753518458091_8.79140316427087_3.41435655959383 chr5 54045704 54046926 + 3.41435655959383 NA intron (NM_001081103, intron 1 of 11) intron (NM_001081103, intron 1 of 11) 47792 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak2_227_1810_0.175152510972719_10.9101470864365_3.41371343391551 chr16 33379549 33382384 + 3.41371343391551 NA promoter-TSS (NR_045709) promoter-TSS (NR_045709) 191 NM_011749 22661 Mm.392667 NM_011749 ENSMUSG00000022811 Zfp148 2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148 zinc finger protein 148 protein-coding common_peak1_151_1440_-0.212653483218791_10.3865278785654_3.41181927849484 chr9 21462763 21464570 + 3.41181927849484 NA intron (NM_007871, intron 2 of 19) intron (NM_007871, intron 2 of 19) 32898 NR_029585 387194 NR_029585 ENSMUSG00000065547 Mir199a-1 Mirn199|Mirn199a-1|mir-199a-1 microRNA 199a-1 ncRNA common_peak2_131_880_0.247546361113177_9.906771389477_3.41169450565204 chr11 107419912 107423009 + 3.41169450565204 NA intron (NM_145823, intron 1 of 9) B1_Mur4|SINE|Alu 49260 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_181_1769_-0.190576291063957_10.6942454994384_3.41161252888274 chr9 20960184 20963382 + 3.41161252888274 NA Intergenic Intergenic -1895 NM_001199432 13433 Mm.128580 NM_010066 ENSMUSG00000004099 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI DNA methyltransferase (cytosine-5) 1 protein-coding common_peak2_98_597_0.297452789616059_9.37272806900613_3.41122665193946 chr11 120098021 120099720 + 3.41122665193946 NA promoter-TSS (NM_183137) promoter-TSS (NM_183137) -64 NM_001110242 208501 Mm.46699 NM_001110242 ENSMUSG00000078572 Ndufaf8 1810043H04Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 8 protein-coding common_peak1_59_512_-0.367546271822993_8.81904187969556_3.41034174264485 chr16 55950952 55951937 + 3.41034174264485 NA Intergenic ID4|SINE|ID -14831 NM_024218 68193 Mm.29221 NM_024218 ENSMUSG00000098274 Rpl24 0610008L05Rik|Bst ribosomal protein L24 protein-coding common_peak2_165_1193_0.214531059089898_10.3288526508098_3.40899451695709 chr14 76109970 76111839 + 3.40899451695709 NA promoter-TSS (NM_013745) promoter-TSS (NM_013745) 13 NM_013745 27275 Mm.21138 NM_013745 ENSMUSG00000022009 Nufip1 Nufip nuclear fragile X mental retardation protein interacting protein 1 protein-coding common_peak1_18_157_-0.703416544780213_6.952072475787_3.40798852492637 chr13 30913577 30913971 + 3.40798852492637 NA intron (NM_025588, intron 6 of 27) intron (NM_025588, intron 6 of 27) 33987 NM_153072 210554 Mm.450571 NM_153072 ENSMUSG00000076430 Hus1b - HUS1 checkpoint clamp component B protein-coding common_peak2_18_157_-0.703416544780213_6.952072475787_3.40798852492637 chr9 35559258 35560016 + 3.40798852492637 NA intron (NM_023292, intron 1 of 3) intron (NM_023292, intron 1 of 3) 171 NM_023292 67049 Mm.425574 NM_023292 ENSMUSG00000032103 Pus3 2610020J05Rik|5730412F04Rik pseudouridine synthase 3 protein-coding unique_peak2_18_157_-0.703416544780213_6.952072475787_3.40798852492637 chr2 132269317 132270081 + 3.40798852492637 NA intron (NM_138651, intron 1 of 12) (TTTTG)n|Simple_repeat|Simple_repeat 6551 NM_138651 110911 Mm.284503 NM_138651 ENSMUSG00000058793 Cds2 5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 protein-coding common_peak2_64_334_0.388897234987761_8.58246590283902_3.40771214640997-2 chr19 4257164 4258558 + 3.40771214640997 NA Intergenic Intergenic 6017 NR_105951 102465595 NR_105951 ENSMUSG00000099290 Mir6985 Gm27719|mmu-mir-6985 microRNA 6985 ncRNA common_peak2_64_334_0.388897234987761_8.58246590283902_3.40771214640997 chr11 29525838 29527079 + 3.40771214640997 NA promoter-TSS (NM_001282120) promoter-TSS (NM_001282120) 61 NM_133767 76784 Mm.285429 NM_133767 ENSMUSG00000020459 Mtif2 2310038D14Rik|2410112O06Rik|IF-2(Mt)|IF-2mt|IF2(mt) mitochondrial translational initiation factor 2 protein-coding common_peak2_41_350_-0.451240265319706_8.22970708764471_3.40733009975855 chr17 3101988 3103175 + 3.40733009975855 NA Intergenic Intergenic -12391 NM_134123 106583 Mm.124373 NM_134123 ENSMUSG00000046201 Scaf8 A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116 SR-related CTD-associated factor 8 protein-coding common_peak1_140_961_0.237372519809261_10.0285793436747_3.40671313033941 chr11 106271937 106273662 + 3.40671313033941 NA 5' UTR (NM_001130187, exon 1 of 13) 5' UTR (NM_001130187, exon 1 of 13) 173 NM_001130187 83796 Mm.21772 NM_031878 ENSMUSG00000078619 Smarcd2 AW322457|Baf60b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding common_peak2_66_348_0.383460473940071_8.63881346317969_3.40629602745646 chr15 85036293 85037756 + 3.40629602745646 NA promoter-TSS (NM_133750) promoter-TSS (NM_133750) -38 NM_133750 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding common_peak1_97_589_0.298917403847836_9.35402984617312_3.40600458577327 chr4 115737538 115738457 + 3.40600458577327 NA promoter-TSS (NM_172698) promoter-TSS (NM_172698) -76 NM_172698 230648 Mm.283565 NM_172698 ENSMUSG00000034210 Efcab14 4732418C07Rik EF-hand calcium binding domain 14 protein-coding common_peak2_172_1260_0.208857971164329_10.4047815459104_3.40543441029584 chr2 73311716 73313554 + 3.40543441029584 NA promoter-TSS (NM_025854) promoter-TSS (NM_025854) -17 NM_029022 74616 Mm.247457 NM_029022 ENSMUSG00000008226 Scrn3 4833415E20Rik|AI427019|AV002033|Ses3 secernin 3 protein-coding common_peak1_61_530_-0.35927353488349_8.87293128336241_3.40413539755562-2 chr10 94544997 94545674 + 3.40413539755562 NA intron (NM_172051, intron 1 of 3) intron (NM_172051, intron 1 of 3) -29922 NM_001168684 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 AW488095|C630016B22Rik|C88213|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak1_61_530_-0.35927353488349_8.87293128336241_3.40413539755562 chr10 42067647 42068587 + 3.40413539755562 NA Intergenic Intergenic -49735 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak2_383_4216_-0.121776593441613_11.9811130095583_3.40404683145529 chr17 86967454 86973367 + 3.40404683145529 NA intron (NM_145491, intron 2 of 4) intron (NM_145491, intron 2 of 4) 7299 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak1_23_197_-0.615581151987515_7.32156604408585_3.40379014241061-5 chr9 59750267 59750709 + 3.40379014241061 NA promoter-TSS (NM_173018) promoter-TSS (NM_173018) 161 NM_001172069 71599 Mm.279070 NM_027838 ENSMUSG00000051705 Senp8 9130010J17Rik|AU020827|Den1|Nedp1|Prsc2 SUMO/sentrin specific peptidase 8 protein-coding common_peak1_23_197_-0.615581151987515_7.32156604408585_3.40379014241061-3 chr4 118427597 118428039 + 3.40379014241061 NA promoter-TSS (NM_001039175) promoter-TSS (NM_001039175) -275 NM_001039175 54325 Mm.282096 NM_019422 ENSMUSG00000006390 Elovl1 AA407424|BB151133|Ssc1 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 protein-coding common_peak1_23_197_-0.615581151987515_7.32156604408585_3.40379014241061-2 chr15 78501220 78501764 + 3.40379014241061 NA Intergenic Intergenic -6426 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding unique_peak2_23_197_-0.615581151987515_7.32156604408585_3.40379014241061 chr19 29399253 29400739 + 3.40379014241061 NA Intergenic Intergenic -10923 NM_021396 58205 Mm.116737 NM_021396 ENSMUSG00000016498 Pdcd1lg2 B7-DC|Btdc|F730015O22Rik|PD-L2 programmed cell death 1 ligand 2 protein-coding common_peak1_23_197_-0.615581151987515_7.32156604408585_3.40379014241061-4 chr7 139972556 139973076 + 3.40379014241061 NA intron (NM_001033465, intron 6 of 6) B1_Mm|SINE|Alu 5939 NM_001033465 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding common_peak1_23_197_-0.615581151987515_7.32156604408585_3.40379014241061 chr13 95963948 95964469 + 3.40379014241061 NA intron (NM_029210, intron 12 of 12) intron (NM_029210, intron 12 of 12) -72286 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding unique_peak2_11_102_-0.899337370277479_6.23683184204448_3.40365932855836 chrX 50605084 50605691 + 3.40365932855836 NA intron (NR_015505, intron 7 of 19) intron (NR_015505, intron 7 of 19) 29934 NR_015505 103012 Mm.482523 NR_015505 ENSMUSG00000085396 Firre 5830467J12Rik|6720401G13Rik|AW048145 functional intergenic repeating RNA element ncRNA common_peak1_14_126_-0.806640565360818_6.58536440409176_3.40349440087085 chr14 121368416 121368815 + 3.40349440087085 NA intron (NM_145465, intron 1 of 10) RMER10A|LTR|ERVL 10615 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding unique_peak2_14_126_-0.806640565360818_6.58536440409176_3.40349440087085 chr7 58447018 58447977 + 3.40349440087085 NA Intergenic MER92B|LTR|ERV1 -210705 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_99_897_-0.271331820232051_9.67490572462512_3.40315682881528 chr2 112714056 112715738 + 3.40315682881528 NA intron (NM_177652, intron 65 of 103) intron (NM_177652, intron 65 of 103) 155215 NM_001165935 74268 Mm.315125 NM_028844 ENSMUSG00000003604 Aven 1700013A01Rik|1700056A21Rik|mAven-L|mAven-S apoptosis, caspase activation inhibitor protein-coding common_peak1_119_775_0.261968212783289_9.73089694857877_3.40295525989062 chr11 54806874 54808628 + 3.40295525989062 NA Intergenic Intergenic -12168 NR_040284 432562 Mm.406948 NR_040284 ENSMUSG00000086789 Lyrm7os Gm12228|OTTMUSG00000005674 LYR motif containing 7, opposite strand ncRNA common_peak1_87_778_-0.292457152995006_9.45925094156417_3.40283089721753 chr16 4683292 4684535 + 3.40283089721753 NA promoter-TSS (NM_001135112) promoter-TSS (NM_001135112) -157 NM_023646 83945 Mm.248337 NM_023646 ENSMUSG00000004069 Dnaja3 1200003J13Rik|1810053A11Rik|C81173|Tid-1|Tid1l DnaJ heat shock protein family (Hsp40) member A3 protein-coding common_peak2_38_323_-0.466906553276764_8.10639672624624_3.40231921565424 chr11 94590654 94592312 + 3.40231921565424 NA intron (NM_153807, intron 1 of 15) ID_B1|SINE|B4 10303 NM_153807 264895 Mm.386885 NM_153807 ENSMUSG00000076435 Acsf2 - acyl-CoA synthetase family member 2 protein-coding common_peak2_189_1426_0.196312481985805_10.5769258604687_3.40217090022694 chr6 85450815 85453356 + 3.40217090022694 NA promoter-TSS (NM_028505) promoter-TSS (NM_028505) -115 NR_028081 73327 Mm.379221 NM_028505 ENSMUSG00000030008 Pradc1 1700040I03Rik|Pap21 protease-associated domain containing 1 protein-coding common_peak2_144_998_0.232428033598472_10.0805548845917_3.4012755255315 chr2 118478767 118480376 + 3.4012755255315 NA intron (NM_009273, intron 1 of 4) CpG-8397 125 NM_009273 20813 Mm.363404 NM_009273 ENSMUSG00000009549 Srp14 14kDa|AW536328 signal recognition particle 14 protein-coding common_peak1_17_47_0.919722861151511_6.04482393129691_3.40122149812097 chr14 64650923 64651373 + 3.40122149812097 NA Intergenic Intergenic -1383 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding unique_peak1_17_47_0.919722861151511_6.04482393129691_3.40122149812097 chr2 86020561 86021015 + 3.40122149812097 NA intron (NM_146578, intron 1 of 2) MMVL30-int|LTR|ERV1 148 NM_146578 258571 Mm.223099 NM_146578 ENSMUSG00000045392 Olfr1033 MOR199-2 olfactory receptor 1033 protein-coding common_peak2_341_3679_-0.130244504054563_11.7803677989171_3.40119855744517 chr3 96243627 96247458 + 3.40119855744517 NA promoter-TSS (NM_178212) promoter-TSS (NM_178212) 45 NM_013549 15267 Mm.5220 NM_013549 ENSMUSG00000064220 Hist2h2aa1 AI448581|H2a-614|H2a-615|Hist2 histone cluster 2, H2aa1 protein-coding common_peak2_69_370_0.372782649089087_8.72166670116535_3.4008712979691 chr2 94157286 94158844 + 3.4008712979691 NA promoter-TSS (NM_019657) promoter-TSS (NM_019657) -156 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding common_peak1_27_230_-0.565184291398132_7.56915689571699_3.40074834600565 chr8 126867868 126868475 + 3.40074834600565 NA Intergenic B4|SINE|B4 77750 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding unique_peak2_46_394_-0.422577755638448_8.41441996524524_3.40065922662699 chr2 127916009 127918068 + 3.40065922662699 NA intron (NM_028765, intron 9 of 17) intron (NM_028765, intron 9 of 17) 62410 NM_028765 74121 Mm.244835 NM_028765 ENSMUSG00000027380 Acoxl 1200014P05Rik|AV025673 acyl-Coenzyme A oxidase-like protein-coding common_peak1_46_394_-0.422577755638448_8.41441996524524_3.40065922662699 chr18 39017003 39017799 + 3.40065922662699 NA intron (NM_175164, intron 1 of 22) B3|SINE|B2 24256 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak2_63_548_-0.351184453507319_8.92507011225154_3.40014772141946 chr2 155472757 155474370 + 3.40014772141946 NA Intergenic Intergenic -32780 NM_019825 56406 Mm.27592 NM_019825 ENSMUSG00000038369 Ncoa6 AIB3|ASC-2|ASC2|NRC|Ncoa7|PRIP|RAP250|mKIAA0181 nuclear receptor coactivator 6 protein-coding common_peak1_145_1375_-0.217333417130112_10.317598046137_3.39955291921181 chr6 128424131 128425242 + 3.39955291921181 NA intron (NM_133927, intron 1 of 11) CpG 224 NM_133927 101142 Mm.31345 NM_133927 ENSMUSG00000001518 Itfg2 2700050P07Rik|AI646725 integrin alpha FG-GAP repeat containing 2 protein-coding common_peak1_139_952_0.238337932986305_10.0155013704031_3.39903279179958 chr7 16272420 16274241 + 3.39903279179958 NA TTS (NM_001136471) TTS (NM_001136471) 362 NM_001136270 66300 Mm.218698 NM_001136270 ENSMUSG00000091811 Inafm1 2610014I16Rik|Prr24 InaF motif containing 1 protein-coding common_peak2_139_952_0.238337932986305_10.0155013704031_3.39903279179958 chr3 58516217 58518608 + 3.39903279179958 NA Intergenic Intergenic -8409 NM_001005509 229317 Mm.21617 NM_001005509 ENSMUSG00000027810 Eif2a D030048D22|D3Ertd194e eukaryotic translation initiation factor 2A protein-coding common_peak1_78_438_0.344021961577958_8.95008811032434_3.39891445189111 chr17 26513589 26514762 + 3.39891445189111 NA Intergenic Intergenic -5703 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak2_55_270_0.431028019850411_8.29766305127908_3.39887353142758 chr6 86486910 86488320 + 3.39887353142758 NA intron (NR_040292, intron 1 of 1) intron (NR_040292, intron 1 of 1) 612 NR_040293 381792 Mm.333223 NR_040292 ENSMUSG00000101655 2310040G24Rik - RIKEN cDNA 2310040G24 gene ncRNA common_peak1_55_270_0.431028019850411_8.29766305127908_3.39887353142758 chr2 29694493 29695404 + 3.39887353142758 NA intron (NM_054050, intron 5 of 23) intron (NM_054050, intron 5 of 23) -66580 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak1_67_356_0.376980619317784_8.66827057368799_3.39880974128935 chr12 40223468 40224191 + 3.39880974128935 NA promoter-TSS (NM_013562) promoter-TSS (NM_013562) 465 NR_045157 629820 Mm.435540 NR_045157 ENSMUSG00000035983 Gm7008 EG629820 predicted gene 7008 ncRNA common_peak1_53_456_-0.387230477032119_8.64243511654201_3.39853507277079 chr7 81854444 81855269 + 3.39853507277079 NA Intergenic L4_A_Mam|LINE|RTE-X -4145 NR_111910 107769 Mm.221412 NM_145375 ENSMUSG00000038623 Tm6sf1 AI428514|BC023123|C630016D09Rik transmembrane 6 superfamily member 1 protein-coding common_peak2_48_223_0.469521314853081_8.04211557948414_3.39852482176746 chr13 106936198 106937175 + 3.39852482176746 NA intron (NM_029665, intron 1 of 29) CpG 229 NM_029665 76582 Mm.132208 NM_029665 ENSMUSG00000042590 Ipo11 1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11 importin 11 protein-coding common_peak2_79_446_0.34022782882017_8.9742449355934_3.39815399196409 chr17 30611734 30612859 + 3.39815399196409 NA intron (NM_001113560, intron 1 of 6) intron (NM_001113560, intron 1 of 6) 363 NM_025374 109801 Mm.261984 NM_025374 ENSMUSG00000024026 Glo1 0610009E22Rik|1110008E19Rik|2510049H23Rik|AW550643|GLY1|Glo-1|Glo-1r|Glo-1s|Glo1-r|Glo1-s|Qglo glyoxalase 1 protein-coding common_peak1_35_297_-0.487870847403139_7.97523309676059_3.3978145433277-2 chr13 43485680 43486419 + 3.3978145433277 NA Intergenic Intergenic -5076 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak1_35_297_-0.487870847403139_7.97523309676059_3.3978145433277 chr10 82899902 82900601 + 3.3978145433277 NA Intergenic MTD|LTR|ERVL-MaLR 33625 NM_025499 66341 Mm.443284 NM_025499 ENSMUSG00000109864 Eid3 1700027M21Rik|NS4EB EP300 interacting inhibitor of differentiation 3 protein-coding common_peak1_42_358_-0.442112863569101_8.2667836020385_3.39762825311348 chr4 108454640 108455465 + 3.39762825311348 NA Intergenic Intergenic -4374 NM_175472 230594 Mm.25181 NM_175472 ENSMUSG00000034610 Zcchc11 6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191 zinc finger, CCHC domain containing 11 protein-coding common_peak1_199_1971_-0.179591710682459_10.8556479810367_3.39759533660611 chr1 138290252 138292659 + 3.39759533660611 NA Intergenic Intergenic 17717 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_172_1668_-0.19555770787005_10.6069893854276_3.39702085545539 chr7 44996697 44999022 + 3.39702085545539 NA promoter-TSS (NM_029410) promoter-TSS (NM_029410) 211 NM_016849 54131 Mm.3960 NM_016849 ENSMUSG00000003184 Irf3 C920001K05Rik|IRF-3 interferon regulatory factor 3 protein-coding common_peak2_73_400_0.358937535942847_8.82692719442634_3.39666282657757 chr6 99810405 99812090 + 3.39666282657757 NA Intergenic ORR1D2-int|LTR|ERVL-MaLR -84855 NM_001170419 50501 Mm.87365 NM_015768 ENSMUSG00000030069 Prok2 Bv8|PK2|Prok1 prokineticin 2 protein-coding common_peak1_47_402_-0.414248249249516_8.44751190390321_3.39596502007624 chr11 88161641 88162445 + 3.39596502007624 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) -7522 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_47_402_-0.414248249249516_8.44751190390321_3.39596502007624 chr5 121197747 121199822 + 3.39596502007624 NA Intergenic RSINE1|SINE|B4 -5717 NM_011290 19988 Mm.262021 NM_011290 ENSMUSG00000029614 Rpl6 Taxreb107 ribosomal protein L6 protein-coding common_peak1_47_402_-0.414248249249516_8.44751190390321_3.39596502007624-2 chr11 121259990 121260668 + 3.39596502007624 NA exon (NM_001080932, exon 1 of 9) exon (NM_001080932, exon 1 of 9) 342 NM_001080932 68837 Mm.209750 NM_001080932 ENSMUSG00000039275 Foxk2 1110054H05Rik|5730434B08Rik|6230415M23Rik|ILF|Ilf1 forkhead box K2 protein-coding common_peak2_76_423_0.348801086209868_8.90232099766813_3.39540702319688 chr4 135945990 135947507 + 3.39540702319688 NA intron (NM_008254, intron 1 of 8) CpG 295 NM_008254 15356 Mm.482102 NM_008254 ENSMUSG00000028672 Hmgcl AW476067|HL 3-hydroxy-3-methylglutaryl-Coenzyme A lyase protein-coding common_peak2_113_1039_-0.251256782291923_9.89673942188249_3.39522007301842 chr2 32501614 32504744 + 3.39522007301842 NA Intergenic Intergenic -32180 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak1_308_3267_-0.13850986821566_11.6049373340379_3.3945017113716 chr7 4656984 4659769 + 3.3945017113716 NA intron (NM_172894, intron 1 of 23) intron (NM_172894, intron 1 of 23) 574 NM_172894 243819 Mm.258670 NM_172894 ENSMUSG00000052296 Ppp6r1 2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115 protein phosphatase 6, regulatory subunit 1 protein-coding common_peak2_32_272_-0.515437193258973_7.83503854429037_3.39403418839312 chr1 95667751 95668578 + 3.39403418839312 NA promoter-TSS (NM_009183) promoter-TSS (NM_009183) -570 NM_001159745 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak1_13_118_-0.834865324476374_6.47738510106976_3.3938980820212 chr7 80232240 80232580 + 3.3938980820212 NA promoter-TSS (NM_178752) promoter-TSS (NM_178752) 395 NM_001291276 23991 Mm.30217 NM_011870 ENSMUSG00000030538 Cib1 Cibkip|Kip|Prkdcip calcium and integrin binding 1 (calmyrin) protein-coding common_peak1_178_1319_0.203222371176953_10.4679333998343_3.39377730650839 chr9 105494769 105495968 + 3.39377730650839 NA promoter-TSS (NM_001253836) promoter-TSS (NM_001253836) -235 NM_001253836 235574 Mm.326247 NM_175025 ENSMUSG00000032570 Atp2c1 1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1 ATPase, Ca++-sequestering protein-coding common_peak1_20_61_0.823278333411623_6.36583547709269_3.39313968020801 chr6 48669265 48669756 + 3.39313968020801 NA Intergenic B1_Mus2|SINE|Alu -6625 NM_174960 317758 Mm.116971 NM_174960 ENSMUSG00000051124 Gimap9 A630002K24|BB145400 GTPase, IMAP family member 9 protein-coding unique_peak1_20_61_0.823278333411623_6.36583547709269_3.39313968020801 chr5 35893405 35893967 + 3.39313968020801 NA intron (NM_027373, intron 1 of 16) intron (NM_027373, intron 1 of 16) 367 NM_027373 70292 Mm.125167 NM_027373 ENSMUSG00000029094 Afap1 2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018 actin filament associated protein 1 protein-coding common_peak1_12_110_-0.865606932895529_6.36161239990234_3.39313968020799 chr4 135066820 135067219 + 3.39313968020799 NA Intergenic Intergenic -53626 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_317_3378_-0.13589204238105_11.6544346139733_3.39159302551801 chr10 127287506 127290641 + 3.39159302551801 NA promoter-TSS (NM_033072) promoter-TSS (NM_033072) -302 NM_033072 110962 Mm.372826 NM_033072 ENSMUSG00000025409 Mbd6 D10Wsu93e methyl-CpG binding domain protein 6 protein-coding common_peak2_69_604_-0.332733306452067_9.07442467893592_3.38790825549757 chr14 55015372 55016346 + 3.38790825549757 NA intron (NM_026890, intron 1 of 10) intron (NM_026890, intron 1 of 10) 405 NM_026890 68966 Mm.21214 NM_026890 ENSMUSG00000022204 Ngdn 1500001L15Rik|Ngd|neuroguidin neuroguidin, EIF4E binding protein protein-coding common_peak1_25_214_-0.592771604948529_7.4518070471152_3.387786149883 chr11 121039005 121039600 + 3.387786149883 NA exon (NM_009854, exon 1 of 4) exon (NM_009854, exon 1 of 4) 176 NM_009854 12516 Mm.4100 NM_009854 ENSMUSG00000025163 Cd7 - CD7 antigen protein-coding common_peak2_68_595_-0.336573200215367_9.05088192035448_3.38681780699875 chr6 83866798 83868187 + 3.38681780699875 NA Intergenic CpG -35751 NM_146169 232164 Mm.404420 NM_146169 ENSMUSG00000045896 Paip2b - poly(A) binding protein interacting protein 2B protein-coding common_peak2_79_700_-0.308911784007135_9.29881474200706_3.38666117623438 chr14 73116148 73118091 + 3.38666117623438 NA Intergenic Intergenic -25391 NM_001170694 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak1_71_623_-0.327492234616869_9.12165610155381_3.38561801784873 chr2 117440826 117442119 + 3.38561801784873 NA Intergenic (TCC)n|Simple_repeat|Simple_repeat -98595 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak2_262_2180_0.159666964634711_11.1706075369581_3.38557628557572 chr11 17158513 17160861 + 3.38557628557572 NA intron (NM_024459, intron 1 of 5) CpG 389 NM_024459 19058 Mm.41840 NM_024459 ENSMUSG00000033953 Ppp3r1 CaNB1|Cnb1|MCIP1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein-coding common_peak2_55_474_-0.378606642014029_8.7024803822113_3.38474070259442 chr18 67209424 67211317 + 3.38474070259442 NA intron (NM_177137, intron 5 of 11) intron (NM_177137, intron 5 of 11) 5011 NM_024190 67064 Mm.73777 NM_024190 ENSMUSG00000109901 Chmp1b 2810405I11Rik|Chmp1b1 charged multivesicular body protein 1B protein-coding common_peak1_55_474_-0.378606642014029_8.7024803822113_3.38474070259442 chr4 149485094 149486035 + 3.38474070259442 NA promoter-TSS (NM_133435) promoter-TSS (NM_133435) 231 NM_026963 69151 Mm.464434 NM_026963 ENSMUSG00000028990 Lzic 1810030J04Rik|AW047580 leucine zipper and CTNNBIP1 domain containing protein-coding common_peak2_33_130_0.596725570623077_7.33178578684899_3.38459130769095 chr4 56864489 56865343 + 3.38459130769095 NA intron (NM_018761, intron 1 of 18) CpG 295 NM_018761 54366 Mm.218891 NM_018761 ENSMUSG00000038816 Ctnnal1 ACRP|AI616177|AW545119|C86009|Catnal1 catenin (cadherin associated protein), alpha-like 1 protein-coding unique_peak2_10_95_-0.95177706921356_6.10907396611438_3.38426176211138 chr3 145576100 145576780 + 3.38426176211138 NA exon (NM_001081094, exon 1 of 10) exon (NM_001081094, exon 1 of 10) 232 NM_001081094 229937 Mm.24586 NM_001081094 ENSMUSG00000074182 Znhit6 2410019A14Rik zinc finger, HIT type 6 protein-coding common_peak2_218_1718_0.179099713060852_10.8369036860085_3.38385710094835 chr9 108489420 108492277 + 3.38385710094835 NA TTS (NM_008483) TTS (NM_008483) 172 NM_027804 71472 Mm.289706 NM_027804 ENSMUSG00000006676 Usp19 8430421I07Rik|AI047774|Zmynd9 ubiquitin specific peptidase 19 protein-coding common_peak2_102_631_0.287767135599637_9.44766431597692_3.38328300167723 chr11 69417719 69420434 + 3.38328300167723 NA Intergenic Intergenic -5401 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak1_436_4190_0.115942182980039_12.0910498976206_3.38310780618685 chr1 133130128 133133616 + 3.38310780618685 NA exon (NM_133819, exon 1 of 2) exon (NM_133819, exon 1 of 2) 706 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding common_peak2_77_681_-0.314072168229956_9.2565918449092_3.38303790760864 chr10 81181980 81183981 + 3.38303790760864 NA promoter-TSS (NM_007828) promoter-TSS (NM_007828) -27 NM_001190474 13144 Mm.10294 NM_007828 ENSMUSG00000034974 Dapk3 ZIPK|dlk death-associated protein kinase 3 protein-coding common_peak2_133_1246_-0.227089738493591_10.1707008805829_3.38248898766455 chr6 83774537 83776941 + 3.38248898766455 NA promoter-TSS (NM_009357) promoter-TSS (NM_009357) 73 NM_009357 21766 Mm.28371 NM_009357 ENSMUSG00000014748 Tex261 3110001O07Rik|AA409339|AI480706|AL033351|TEG-261 testis expressed gene 261 protein-coding common_peak2_72_633_-0.326020003753779_9.14532902826252_3.38238329276731 chr13 23581284 23583000 + 3.38238329276731 NA TTS (NM_175654) TTS (NM_175654) 540 NM_175654 319156 Mm.260530 NM_175654 ENSMUSG00000061482 Hist1h4d - histone cluster 1, H4d protein-coding common_peak2_72_633_-0.326020003753779_9.14532902826252_3.38238329276731-2 chr15 89127817 89129302 + 3.38238329276731 NA non-coding (NR_028449, exon 1 of 19) non-coding (NR_028449, exon 1 of 19) 141 NR_028448 170787 Mm.203954 NM_199198 ENSMUSG00000062906 Hdac10 AW548891|Hd10 histone deacetylase 10 protein-coding common_peak1_117_1080_-0.246012091506469_9.95514476198142_3.38137633707679 chr12 69296287 69297461 + 3.38137633707679 NA 5' UTR (NM_027117, exon 1 of 13) 5' UTR (NM_027117, exon 1 of 13) 193 NM_027117 69554 Mm.234368 NM_027117 ENSMUSG00000020978 Klhdc2 2310022K15Rik|D12Ertd522e|HCLP-1|LCP kelch domain containing 2 protein-coding common_peak2_162_1166_0.215255598214021_10.2962166448144_3.38075991757776 chr8 124896679 124898701 + 3.38075991757776 NA promoter-TSS (NM_198103) promoter-TSS (NM_198103) 15 NM_198103 102058 Mm.347360 NM_198103 ENSMUSG00000074030 Exoc8 AI414418|EXO84|Exo84p|R74783|SEC84 exocyst complex component 8 protein-coding common_peak1_36_148_0.560615130749249_7.49947608583679_3.37979478749364 chr17 87325110 87325871 + 3.37979478749364 NA intron (NM_028639, intron 8 of 19) intron (NM_028639, intron 8 of 19) 42604 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak1_36_148_0.560615130749249_7.49947608583679_3.37979478749364-2 chr4 140925501 140926340 + 3.37979478749364 NA intron (NM_008812, intron 4 of 15) intron (NM_008812, intron 4 of 15) 19560 NM_008812 18600 Mm.2296 NM_008812 ENSMUSG00000028927 Padi2 Pdi|Pdi2|mKIAA0994 peptidyl arginine deiminase, type II protein-coding unique_peak2_36_148_0.560615130749249_7.49947608583679_3.37979478749364 chr18 80622769 80624077 + 3.37979478749364 NA intron (NM_198429, intron 9 of 9) intron (NM_198429, intron 9 of 9) -78877 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_132_890_0.244618691140438_9.92159096709214_3.37964636429329 chr4 119910979 119912762 + 3.37964636429329 NA intron (NM_010657, intron 1 of 8) intron (NM_010657, intron 1 of 8) 97192 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak1_110_1008_-0.254792291741662_9.85131431323553_3.37874638916318 chr13 54621723 54622632 + 3.37874638916318 NA intron (NM_178397, intron 1 of 10) CpG 393 NM_178397 76577 Mm.194459 NM_178397 ENSMUSG00000025873 Faf2 2210404D11Rik|AI462440|Ubxd8|mKIAA0887 Fas associated factor family member 2 protein-coding common_peak1_93_837_-0.281063035086976_9.57027491615586_3.37870473847307 chr7 105972450 105973862 + 3.37870473847307 NA Intergenic Lx|LINE|L1 -19186 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak1_169_1232_0.210297074636008_10.3731056217208_3.37846608007683 chr9 100643472 100644925 + 3.37846608007683 NA intron (NM_009282, intron 1 of 33) CpG 575 NM_009282 20842 Mm.42135 NM_009282 ENSMUSG00000037286 Stag1 AU045003|SA-1|Scc3 stromal antigen 1 protein-coding common_peak1_122_1131_-0.239080461613172_10.0251180120253_3.37823340863816 chr10 127380038 127381486 + 3.37823340863816 NA Intergenic C-rich|Low_complexity|Low_complexity -9549 NM_001168292 71750 Mm.29342 NM_027900 ENSMUSG00000025404 R3hdm2 1300003K24Rik|AU041262|mKIAA1002 R3H domain containing 2 protein-coding common_peak2_28_102_0.66216278732935_7.01758192084789_3.37761929092561 chr5 148310602 148311337 + 3.37761929092561 NA intron (NM_029920, intron 14 of 14) MuRRS-int|LTR|ERV1 81846 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_28_102_0.66216278732935_7.01758192084789_3.37761929092561 chr12 115691840 115692437 + 3.37761929092561 NA Intergenic Intergenic 3656 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA common_peak2_116_1069_-0.246317115527365_9.94023652352483_3.37727872560329 chr15 102229970 102232937 + 3.37727872560329 NA intron (NM_013566, intron 1 of 14) intron (NM_013566, intron 1 of 14) 482 NM_013566 16421 Mm.58 NM_013566 ENSMUSG00000001281 Itgb7 Ly69 integrin beta 7 protein-coding common_peak1_146_1385_-0.215700789073246_10.3288611476006_3.37547979023934 chr12 8640498 8641654 + 3.37547979023934 NA Intergenic CpG -33058 NM_001160221 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding common_peak2_186_1397_0.197769028726588_10.5480331597387_3.37506850382739 chr5 108628404 108630397 + 3.37506850382739 NA promoter-TSS (NM_001163532) promoter-TSS (NM_001163532) 377 NM_153569 231580 Mm.276647 NM_153569 ENSMUSG00000062234 Gak D130045N16Rik cyclin G associated kinase protein-coding common_peak1_17_149_-0.724133328623213_6.86675202618427_3.37505163888231-2 chr2 52319625 52320077 + 3.37505163888231 NA intron (NM_010889, intron 9 of 156) intron (NM_010889, intron 9 of 156) 18947 NM_010889 17996 Mm.389247 NM_010889 ENSMUSG00000026950 Neb AI595938 nebulin protein-coding common_peak1_17_149_-0.724133328623213_6.86675202618427_3.37505163888231-3 chr9 57421640 57421950 + 3.37505163888231 NA intron (NM_176831, intron 3 of 6) intron (NM_176831, intron 3 of 6) 18319 NM_176831 66812 Mm.250508 NM_176831 ENSMUSG00000063849 Ppcdc 1810057I13Rik|8430432M10Rik phosphopantothenoylcysteine decarboxylase protein-coding common_peak1_26_91_0.698645610782582_6.8728847614483_3.37505163888231 chr13 20142492 20142992 + 3.37505163888231 NA intron (NM_080288, intron 1 of 21) MIRb|SINE|MIR 52235 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding common_peak1_17_149_-0.724133328623213_6.86675202618427_3.37505163888231 chr12 110889289 110889719 + 3.37505163888231 NA promoter-TSS (NM_026048) promoter-TSS (NM_026048) 240 NM_001081057 104859 Mm.35583 NM_175336 ENSMUSG00000021275 Tecpr2 4930573I19Rik|AI604920|mKIAA0297 tectonin beta-propeller repeat containing 2 protein-coding common_peak1_57_492_-0.370168210678987_8.76035973103842_3.37402774930935 chr2 128190443 128191188 + 3.37402774930935 NA Intergenic Intergenic 63240 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_326_2889_0.13902297429488_11.5663652645355_3.37286612611735 chr15 76079135 76081774 + 3.37286612611735 NA intron (NM_028364, intron 1 of 11) CpG 416 NM_001164600 67959 Mm.29965 NM_028364 ENSMUSG00000002524 Puf60 2410104I19Rik|2810454F19Rik|SIAHBP1 poly-U binding splicing factor 60 protein-coding unique_peak2_6_65_-1.21105399171324_5.43886712350183_3.37274147056187 chr2 164942467 164943068 + 3.37274147056187 NA Intergenic Intergenic -5452 NM_013599 17395 Mm.4406 NM_013599 ENSMUSG00000017737 Mmp9 AW743869|B/MMP9|Clg4b|Gel B|MMP-9|pro-MMP-9 matrix metallopeptidase 9 protein-coding common_peak2_20_173_-0.66546885205023_7.11020906982361_3.37212872388289 chr6 86593318 86594055 + 3.37212872388289 NA Intergenic B3|SINE|B2 -34488 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak1_20_173_-0.66546885205023_7.11020906982361_3.37212872388289-3 chr19 53439717 53440174 + 3.37212872388289 NA Intergenic Intergenic 24851 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_20_173_-0.66546885205023_7.11020906982361_3.37212872388289-4 chr9 63709621 63710088 + 3.37212872388289 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 48140 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_20_173_-0.66546885205023_7.11020906982361_3.37212872388289 chr11 83604960 83605425 + 3.37212872388289 NA intron (NR_036453, intron 2 of 8) intron (NR_036453, intron 2 of 8) -12105 NM_009139 20305 Mm.137 NM_009139 ENSMUSG00000018927 Ccl6 MRP-1|Scya6|c10 chemokine (C-C motif) ligand 6 protein-coding common_peak1_20_173_-0.66546885205023_7.11020906982361_3.37212872388289-2 chr19 21785338 21785798 + 3.37212872388289 NA intron (NM_031997, intron 2 of 24) intron (NM_031997, intron 2 of 24) 7228 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding unique_peak2_49_420_-0.405048919743654_8.51515196319457_3.37209789244516 chrX 102036340 102038131 + 3.37209789244516 NA intron (NM_001163610, intron 1 of 7) intron (NM_001163610, intron 1 of 7) 34072 NM_001278534 331474 Mm.23297 NM_183318 ENSMUSG00000049191 Rgag4 6430402L03Rik|Mar5|Mart5|mKIAA2001 retrotransposon gag domain containing 4 protein-coding common_peak1_44_375_-0.428410214113006_8.34038374462114_3.37209786706514 chr7 64391575 64392292 + 3.37209786706514 NA promoter-TSS (NM_028626) promoter-TSS (NM_028626) 303 NM_026483 67973 Mm.26973 NM_026483 ENSMUSG00000030521 Mphosph10 2810453H10Rik|5730405D16Rik|AI326008 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) protein-coding common_peak2_44_375_-0.428410214113006_8.34038374462114_3.37209786706514 chr9 124114143 124115982 + 3.37209786706514 NA Intergenic Intergenic -6481 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak1_161_1157_0.215534856189999_10.2851869660842_3.3714098850868 chr8 124896762 124898650 + 3.3714098850868 NA promoter-TSS (NM_198103) promoter-TSS (NM_198103) -1 NM_198103 102058 Mm.347360 NM_198103 ENSMUSG00000074030 Exoc8 AI414418|EXO84|Exo84p|R74783|SEC84 exocyst complex component 8 protein-coding common_peak2_245_2504_-0.158404795677505_11.2113924902438_3.36981998986188 chr17 65612244 65614626 + 3.36981998986188 NA 5' UTR (NM_013933, exon 1 of 6) 5' UTR (NM_013933, exon 1 of 6) 120 NM_013933 30960 Mm.266767 NM_013933 ENSMUSG00000024091 Vapa 33kDa|VAP33 vesicle-associated membrane protein, associated protein A protein-coding common_peak1_100_906_-0.268110546923065_9.69090346706699_3.36940256211523 chr14 77864103 77865713 + 3.36940256211523 NA intron (NM_025384, intron 1 of 5) intron (NM_025384, intron 1 of 5) 10009 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding common_peak2_88_517_0.316210081077633_9.17491332822537_3.36899087741571-2 chr6 99387396 99389743 + 3.36899087741571 NA intron (NM_053202, intron 1 of 18) intron (NM_053202, intron 1 of 18) 46776 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_88_517_0.316210081077633_9.17491332822537_3.36899087741571 chr10 82889299 82891904 + 3.36899087741571 NA intron (NM_001042514, intron 13 of 13) intron (NM_001042514, intron 13 of 13) 23975 NM_025499 66341 Mm.443284 NM_025499 ENSMUSG00000109864 Eid3 1700027M21Rik|NS4EB EP300 interacting inhibitor of differentiation 3 protein-coding common_peak2_50_237_0.452853013819513_8.1212442702177_3.36898687972023 chrX 144275547 144276985 + 3.36898687972023 NA Intergenic MMVL30-int|LTR|ERV1 -41700 NR_037145 67574 Mm.249084 NM_026247 ENSMUSG00000041718 Alg13 2810046O15Rik|4833435D08Rik|Glt28d1|MDS031|OTTMUSG00000018917 asparagine-linked glycosylation 13 protein-coding unique_peak2_36_306_-0.482311194158768_8.02093924829079_3.36805257430027 chr4 43693340 43695173 + 3.36805257430027 NA TTS (NM_019485) TTS (NM_019485) 6551 NM_019485 56014 Mm.331571 NM_019485 ENSMUSG00000050215 Olfr70 MOR262-10|mOR6 olfactory receptor 70 protein-coding common_peak1_114_1048_-0.248232571605438_9.91068267677455_3.36630642859118 chr6 125095972 125097469 + 3.36630642859118 NA promoter-TSS (NR_106012) promoter-TSS (NR_106012) -304 NR_106012 102466272 NR_106012 ENSMUSG00000098762 Mir7045 Gm27758|mmu-mir-7045 microRNA 7045 ncRNA common_peak2_87_509_0.318668928207805_9.15368790096276_3.36616954881027 chr9 57910255 57911699 + 3.36616954881027 NA promoter-TSS (NM_001122873) promoter-TSS (NM_001122873) -9 NM_027086 69459 Mm.41735 NM_027086 ENSMUSG00000055720 Ubl7 2300004C15Rik ubiquitin-like 7 (bone marrow stromal cell-derived) protein-coding unique_peak2_28_238_-0.552203493468181_7.62476506124666_3.36506013352234 chr11 69045097 69046565 + 3.36506013352234 NA 5' UTR (NM_011496, exon 1 of 8) 5' UTR (NM_011496, exon 1 of 8) 194 NM_011496 20877 Mm.3488 NM_011496 ENSMUSG00000020897 Aurkb AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5 aurora kinase B protein-coding common_peak1_28_238_-0.552203493468181_7.62476506124666_3.36506013352234 chr4 117182575 117183276 + 3.36506013352234 NA promoter-TSS (NM_134471) promoter-TSS (NM_134471) -301 NM_134471 73804 Mm.247651 NM_134471 ENSMUSG00000028678 Kif2c 4930402F02Rik|ESTM5|Knsl6|MCAK|X83316 kinesin family member 2C protein-coding common_peak1_22_71_0.768535802651198_6.55419290276791_3.36498501411274 chr2 35446913 35447416 + 3.36498501411274 NA intron (NM_001308299, intron 1 of 7) intron (NM_001308299, intron 1 of 7) 14285 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak1_22_71_0.768535802651198_6.55419290276791_3.36498501411274-2 chr2 75762912 75763357 + 3.36498501411274 NA Intergenic L1ME3A|LINE|L1 -58471 NM_010902 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding unique_peak2_22_71_0.768535802651198_6.55419290276791_3.36498501411274 chr4 149710177 149710760 + 3.36498501411274 NA Intergenic Intergenic -8839 NM_001029837 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak2_59_299_0.406450053288179_8.43204371713997_3.36483863347866 chr3 88445393 88447348 + 3.36483863347866 NA intron (NM_001163489, intron 10 of 14) ID_B1|SINE|B4 -5419 NR_105978 102465611 NR_105978 ENSMUSG00000098655 Mir7011 Gm27677|mmu-mir-7011 microRNA 7011 ncRNA common_peak1_160_1147_0.217089986683291_10.2734519200173_3.36456407183222 chr11 119670180 119672301 + 3.36456407183222 NA intron (NM_028898, intron 2 of 33) intron (NM_028898, intron 2 of 33) 68335 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak1_86_501_0.321254276715081_9.13217069230831_3.36364946280296 chr8 46785332 46786396 + 3.36364946280296 NA intron (NM_008391, intron 1 of 8) intron (NM_008391, intron 1 of 8) 46119 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding unique_peak1_19_56_0.858244213466035_6.26201212089776_3.36342019626518-2 chr2 102948086 102948522 + 3.36342019626518 NA Intergenic Intergenic -46639 NM_001039150 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak1_19_56_0.858244213466035_6.26201212089776_3.36342019626518 chr2 71837171 71837695 + 3.36342019626518 NA intron (NM_001277970, intron 11 of 24) intron (NM_001277970, intron 11 of 24) -35791 NM_172665 228026 Mm.34411 NM_172665 ENSMUSG00000006494 Pdk1 B830012B01|D530020C15Rik pyruvate dehydrogenase kinase, isoenzyme 1 protein-coding common_peak1_19_56_0.858244213466035_6.26201212089776_3.36342019626518-2 chr13 24632261 24632776 + 3.36342019626518 NA intron (NM_178658, intron 1 of 13) intron (NM_178658, intron 1 of 13) -6130 NM_001080381 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_19_56_0.858244213466035_6.26201212089776_3.36342019626518 chr11 16980871 16981289 + 3.36342019626518 NA intron (NM_019549, intron 9 of 9) intron (NM_019549, intron 9 of 9) 27638 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding common_peak1_216_2164_-0.169932995614312_10.9951848118069_3.36239887882727 chr8 88198631 88200861 + 3.36239887882727 NA intron (NM_001164498, intron 1 of 12) CpG 533 NM_001164498 214627 Mm.491211 NM_001164497 ENSMUSG00000036779 Papd5 5730445M16Rik|5830428A09 PAP associated domain containing 5 protein-coding common_peak2_198_1959_-0.179656145155153_10.846809866425_3.36210747481833 chr4 8802285 8806708 + 3.36210747481833 NA intron (NM_001277149, intron 4 of 37) intron (NM_001277149, intron 4 of 37) 114090 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_50_429_-0.400522072462003_8.54793181335846_3.36184421132746-2 chr6 115601819 115602487 + 3.36184421132746 NA intron (NM_023290, intron 1 of 7) CpG 215 NM_023290 67027 Mm.101316 NM_023290 ENSMUSG00000000439 Mkrn2 2610002L04Rik|C81377 makorin, ring finger protein, 2 protein-coding common_peak1_50_429_-0.400522072462003_8.54793181335846_3.36184421132746 chr19 7040332 7041040 + 3.36184421132746 NA promoter-TSS (NM_016737) promoter-TSS (NM_016737) -660 NM_016737 20867 Mm.258633 NM_016737 ENSMUSG00000024966 Stip1 Hop|Sti1|p60 stress-induced phosphoprotein 1 protein-coding common_peak2_119_776_0.260110266562705_9.73182592168906_3.36146074121396 chr2 80314467 80316358 + 3.36146074121396 NA promoter-TSS (NM_024181) promoter-TSS (NM_024181) -54 NM_024181 66861 Mm.21762 NM_024181 ENSMUSG00000027006 Dnajc10 1200006L06Rik|D2Ertd706e|ERdj5|JPDI DnaJ heat shock protein family (Hsp40) member C10 protein-coding common_peak2_87_777_-0.290603979919529_9.45832435502643_3.36139633755705 chr7 135658599 135660908 + 3.36139633755705 NA intron (NM_001316681, intron 4 of 17) intron (NM_001316681, intron 4 of 17) -7439 NR_015548 67765 Mm.445272 NR_015548 ENSMUSG00000097471 5830432E09Rik - RIKEN cDNA 5830432E09 gene ncRNA common_peak2_24_81_0.7284631875183_6.72178359837723_3.36135487713719 chr3 104219955 104220487 + 3.36135487713719 NA 5' UTR (NM_133853, exon 1 of 22) 5' UTR (NM_133853, exon 1 of 22) 185 NM_133853 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding common_peak1_24_81_0.7284631875183_6.72178359837723_3.36135487713719-2 chr3 59295794 59296360 + 3.36135487713719 NA exon (NM_177855, exon 40 of 44) exon (NM_177855, exon 40 of 44) -33246 NM_027571 70839 Mm.422675 NM_027571 ENSMUSG00000036353 P2ry12 2900079B22Rik|4921504D23Rik|P2Y12 purinergic receptor P2Y, G-protein coupled 12 protein-coding common_peak1_24_81_0.7284631875183_6.72178359837723_3.36135487713719-3 chrX 13241649 13242218 + 3.36135487713719 NA intron (NR_045429, intron 1 of 2) intron (NR_045429, intron 1 of 2) -5650 NR_045430 72122 Mm.75434 NR_045429 ENSMUSG00000100714 2010308F09Rik - RIKEN cDNA 2010308F09 gene ncRNA common_peak1_24_81_0.7284631875183_6.72178359837723_3.36135487713719 chr11 74549412 74549847 + 3.36135487713719 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 40529 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_152_1073_0.223027015295328_10.1802917856331_3.36125843134443 chr16 87454617 87456021 + 3.36125843134443 NA intron (NM_024258, intron 1 of 17) CpG 334 NM_024258 74112 Mm.152941 NM_024258 ENSMUSG00000025616 Usp16 1200004E02Rik|2810483I07Rik|6330514E22Rik|UBPM ubiquitin specific peptidase 16 protein-coding common_peak1_230_1843_0.172233116497011_10.9347394986778_3.36125595734552 chr15 97341532 97343342 + 3.36125595734552 NA intron (NM_172293, intron 3 of 5) intron (NM_172293, intron 3 of 5) -95150 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak2_262_2181_0.159005632951855_11.1709382027995_3.36084952939124 chr4 121014474 121017867 + 3.36084952939124 NA intron (NM_133716, intron 1 of 9) intron (NM_133716, intron 1 of 9) 1077 NM_133716 69780 Mm.271819 NM_133716 ENSMUSG00000032870 Smap2 1810031K02Rik|AA408614|Smap1l small ArfGAP 2 protein-coding common_peak1_59_511_-0.36473125621594_8.81763437189203_3.35926885962054 chr2 115581198 115581971 + 3.35926885962054 NA promoter-TSS (NM_207264) promoter-TSS (NM_207264) -132 NM_207264 399568 Mm.134929 NM_207264 ENSMUSG00000040282 BC052040 - cDNA sequence BC052040 protein-coding common_peak2_181_1349_0.20021366196821_10.4988505229223_3.3588420305375 chr13 52571069 52573529 + 3.3588420305375 NA intron (NR_046069, intron 1 of 3) intron (NR_046069, intron 1 of 3) 926 NR_046069 100040572 Mm.278873 NR_046069 Gm2848 - predicted gene 2848 ncRNA common_peak1_97_590_0.296474227919509_9.35525143413729_3.35842749683079 chr14 21750536 21751512 + 3.35842749683079 NA intron (NM_026283, intron 1 of 5) intron (NM_026283, intron 1 of 5) 493 NM_026283 67630 Mm.102765 NM_026283 ENSMUSG00000021770 Samd8 1110053F04Rik|1700010P07Rik|SMSr sterile alpha motif domain containing 8 protein-coding common_peak2_61_313_0.398673767029035_8.49395763240615_3.35783902494829 chr5 139056804 139058797 + 3.35783902494829 NA intron (NM_001253890, intron 6 of 10) intron (NM_001253890, intron 6 of 10) -62847 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak1_85_757_-0.293714556730787_9.4191967598057_3.3575224414447 chr6 124808591 124809812 + 3.3575224414447 NA intron (NM_013539, intron 1 of 2) intron (NM_013539, intron 1 of 2) 283 NM_001306053 14794 Mm.261906 NM_013539 ENSMUSG00000038451 Spsb2 AI461677|C9|Grcc9|SSB2 splA/ryanodine receptor domain and SOCS box containing 2 protein-coding common_peak1_37_154_0.550852109309009_7.55155045992874_3.35710320288412 chr17 83977734 83978505 + 3.35710320288412 NA Intergenic Intergenic -20433 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak2_37_154_0.550852109309009_7.55155045992874_3.35710320288412 chr9 40757690 40758579 + 3.35710320288412 NA intron (NM_133733, intron 1 of 6) intron (NM_133733, intron 1 of 6) -43139 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding common_peak2_51_244_0.445395616824717_8.15933574741493_3.35651442409186 chr11 109610554 109612284 + 3.35651442409186 NA promoter-TSS (NM_145940) promoter-TSS (NM_145940) -30 NM_145940 52639 Mm.35817 NM_145940 ENSMUSG00000041895 Wipi1 4930533H01Rik|AW411817|D11Ertd498e WD repeat domain, phosphoinositide interacting 1 protein-coding common_peak2_373_4084_-0.122590377744666_11.9348251741607_3.35641584505999 chr1 165787479 165792469 + 3.35641584505999 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 1293 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_445_4302_0.113969060192449_12.1281116550445_3.35640971815314 chr3 96556715 96559087 + 3.35640971815314 NA promoter-TSS (NM_001009935) promoter-TSS (NM_001009935) -56 NM_001009935 56338 Mm.410189 NM_023719 ENSMUSG00000038393 Txnip 1200008J08Rik|AA682105|Hyplip1|THIF|Tbp-2|VDUP1 thioredoxin interacting protein protein-coding common_peak1_129_864_0.246970508995165_9.88004157702167_3.35578982645036 chr3 20154161 20155735 + 3.35578982645036 NA intron (NM_013755, intron 1 of 6) CpG 168 NM_013755 27357 Mm.6375 NM_013755 ENSMUSG00000019528 Gyg AU017667|Gyg1 glycogenin protein-coding common_peak2_22_189_-0.631394804237438_7.25415820621223_3.35576500486105 chr17 24960038 24960797 + 3.35576500486105 NA TTS (NM_020608) TTS (NM_020608) 206 NM_198937 52009 Mm.371601 NM_198937 ENSMUSG00000024165 Hn1l 2810430B18Rik|AL022629|C16orf34|D17Ertd441e hematological and neurological expressed 1-like protein-coding unique_peak2_22_189_-0.631394804237438_7.25415820621223_3.35576500486105-2 chr4 40776125 40777639 + 3.35576500486105 NA Intergenic B1_Mus1|SINE|Alu -18997 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding common_peak1_22_189_-0.631394804237438_7.25415820621223_3.35576500486105 chr1 80765732 80766224 + 3.35576500486105 NA Intergenic Intergenic -7425 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding unique_peak2_22_189_-0.631394804237438_7.25415820621223_3.35576500486105 chr10 96587808 96589004 + 3.35576500486105 NA Intergenic Intergenic -28595 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_62_320_0.39517967282948_8.52401932353704_3.35543642949613 chr3 108084969 108086785 + 3.35543642949613 NA promoter-TSS (NM_001289720) promoter-TSS (NM_001289720) -451 NM_001289720 109674 Mm.274335 NM_028779 ENSMUSG00000027889 Ampd2 1200014F01Rik|AI552571|Ampd-2|m4521Dajl adenosine monophosphate deaminase 2 protein-coding common_peak1_203_1567_0.186185555384961_10.7078026218077_3.35456772749764 chr10 89744322 89745979 + 3.35456772749764 NA 5' UTR (NM_029166, exon 1 of 21) 5' UTR (NM_029166, exon 1 of 21) 159 NM_029166 75089 Mm.268922 NM_029166 ENSMUSG00000019951 Uhrf1bp1l 2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701 UHRF1 (ICBP90) binding protein 1-like protein-coding common_peak1_19_164_-0.67518798661504_7.0287282209383_3.35415727806058 chr10 82128001 82128458 + 3.35415727806058 NA intron (NM_001163064, intron 1 of 3) CpG 216 NM_001163064 216177 Mm.482395 NM_001163064 ENSMUSG00000078435 AU041133 - expressed sequence AU041133 protein-coding common_peak1_34_136_0.583413631563007_7.38973889874203_3.35384833541902 chr7 19322112 19322765 + 3.35384833541902 NA Intergenic ID|SINE|ID -12393 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding unique_peak2_24_205_-0.600485335046835_7.3862578596598_3.35384833541902 chr16 97467549 97468961 + 3.35384833541902 NA Intergenic MTE2b|LTR|ERVL-MaLR -5349 NR_003520 17857 Mm.33996 NM_010846 ENSMUSG00000000386 Mx1 AI893580|Mx|Mx-1 MX dynamin-like GTPase 1 protein-coding common_peak1_303_2631_0.144869674407074_11.4343786109388_3.35284519623219 chr11 60104929 60107263 + 3.35284519623219 NA intron (NM_009021, intron 1 of 5) CpG 1083 NM_009021 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak2_51_438_-0.39604357370807_8.58005534268132_3.35261110492746 chr4 56946563 56947630 + 3.35261110492746 NA exon (NM_175518, exon 1 of 18) exon (NM_175518, exon 1 of 18) 333 NM_175518 242474 Mm.296632 NM_175518 ENSMUSG00000055296 Tmem245 A630051L19Rik|AI957324|D730040F13Rik transmembrane protein 245 protein-coding common_peak2_31_119_0.615974978703005_7.21487808496002_3.35257008511777 chr1 87658989 87659952 + 3.35257008511777 NA intron (NR_122078, intron 2 of 27) intron (NR_122078, intron 2 of 27) 39158 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_31_119_0.615974978703005_7.21487808496002_3.35257008511777 chr6 50519991 50520958 + 3.35257008511777 NA Intergenic Intergenic 46000 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding unique_peak2_31_119_0.615974978703005_7.21487808496002_3.35257008511777 chr10 61242066 61243024 + 3.35257008511777 NA intron (NM_001081127, intron 4 of 21) B1F|SINE|Alu 30893 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak1_37_314_-0.472231503804033_8.06309226648526_3.35231630505223 chr11 106564524 106565384 + 3.35231630505223 NA intron (NM_198292, intron 2 of 11) intron (NM_198292, intron 2 of 11) 47976 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding common_peak2_52_446_-0.388389255740206_8.60993639331322_3.35211243869055 chr10 117829010 117831813 + 3.35211243869055 NA intron (NM_024457, intron 1 of 7) intron (NM_024457, intron 1 of 7) 15563 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak2_52_446_-0.388389255740206_8.60993639331322_3.35211243869055-2 chr3 14578346 14579594 + 3.35211243869055 NA exon (NM_007892, exon 1 of 8) exon (NM_007892, exon 1 of 8) 299 NM_007892 13559 Mm.153415 NM_007892 ENSMUSG00000027552 E2f5 AU024671|E2F-5 E2F transcription factor 5 protein-coding common_peak1_138_1298_-0.221200934655279_10.2325852481202_3.35197698403236 chrX 10717125 10718916 + 3.35197698403236 NA 5' UTR (NM_001166635, exon 2 of 2) 5' UTR (NM_001166635, exon 2 of 2) 655 NM_001166635 68041 Mm.29429 NM_026524 ENSMUSG00000008035 Mid1ip1 3110038L01Rik|Mig12|S14R Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) protein-coding common_peak1_123_811_0.254570909921842_9.7926213721461_3.35047089515827 chr6 148944534 148946120 + 3.35047089515827 NA intron (NM_019643, intron 1 of 5) CpG 1105 NM_019643 56306 Mm.18637 NM_019643 ENSMUSG00000039985 Fam60a Ppcs1|Pptcs1|Tera family with sequence similarity 60, member A protein-coding common_peak2_81_462_0.333187192991547_9.02146197975601_3.35021207876817 chr13 108213925 108215452 + 3.35021207876817 NA intron (NM_029001, intron 1 of 7) CpG 284 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding common_peak2_34_288_-0.493479967977144_7.92818569851211_3.34986464542059 chr17 86322865 86324524 + 3.34986464542059 NA intron (NM_011104, intron 1 of 14) intron (NM_011104, intron 1 of 14) -36516 NR_045435 72104 Mm.443401 NR_045435 ENSMUSG00000100738 2010106C02Rik - RIKEN cDNA 2010106C02 gene ncRNA unique_peak2_34_288_-0.493479967977144_7.92818569851211_3.34986464542059 chr8 122932156 122934153 + 3.34986464542059 NA intron (NR_037865, intron 2 of 13) intron (NR_037865, intron 2 of 13) 84780 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding common_peak1_16_43_0.944104642336875_5.93148393980573_3.34974560136354 chr17 37272005 37272540 + 3.34974560136354 NA exon (NM_013819, exon 4 of 8) exon (NM_013819, exon 4 of 8) 2038 NM_013819 14991 Mm.14437 NM_013819 ENSMUSG00000016206 H2-M3 H-2M3|Hmt|M3a|MuprM3|MuprM301|MuprM302|R4B2 histocompatibility 2, M region locus 3 protein-coding unique_peak1_16_43_0.944104642336875_5.93148393980573_3.34974560136354 chr1 95268045 95268501 + 3.34974560136354 NA Intergenic Intergenic -45355 NM_026321 67698 Mm.272705 NM_026321 ENSMUSG00000051185 Fam174a 2310044D20Rik|Fam174|Naa6|Tmem157 family with sequence similarity 174, member A protein-coding common_peak1_16_43_0.944104642336875_5.93148393980573_3.34974560136354-2 chr8 128689911 128690219 + 3.34974560136354 NA intron (NM_010578, intron 1 of 15) intron (NM_010578, intron 1 of 15) 4411 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding unique_peak1_16_43_0.944104642336875_5.93148393980573_3.34974560136354-2 chr4 9770735 9771130 + 3.34974560136354 NA intron (NR_030693, intron 1 of 3) intron (NR_030693, intron 1 of 3) 347 NR_030693 320152 Mm.159946 NR_030693 4930412C18Rik 5730591J02Rik RIKEN cDNA 4930412C18 gene ncRNA common_peak2_128_855_0.248394700006086_9.86566433640419_3.34907837294957 chr13 114303472 114306433 + 3.34907837294957 NA intron (NM_010887, intron 4 of 4) intron (NM_010887, intron 4 of 4) 83142 NM_010887 17993 Mm.253142 NM_010887 ENSMUSG00000021764 Ndufs4 6720411N02Rik|C1-18k NADH dehydrogenase (ubiquinone) Fe-S protein 4 protein-coding common_peak1_31_263_-0.52152854504693_7.78362984683499_3.34881650404902-2 chr13 24415038 24415683 + 3.34881650404902 NA intron (NM_001284520, intron 1 of 14) GA-rich|Low_complexity|Low_complexity 238 NM_001284520 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding common_peak1_31_263_-0.52152854504693_7.78362984683499_3.34881650404902 chr12 102691019 102691739 + 3.34881650404902 NA intron (NM_172584, intron 1 of 9) intron (NM_172584, intron 1 of 9) -6359 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_41_179_0.51223385865518_7.74797002565727_3.3475040255998-2 chr6 86605472 86606283 + 3.3475040255998 NA Intergenic ID_B1|SINE|B4 -22297 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak1_41_179_0.51223385865518_7.74797002565727_3.3475040255998 chr2 3752602 3753348 + 3.3475040255998 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 39517 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_142_1341_-0.217978609617756_10.2811796513913_3.34734150551527 chr9 64809766 64811233 + 3.34734150551527 NA promoter-TSS (NM_001162917) promoter-TSS (NM_001162917) -512 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak2_162_1557_-0.201635074140299_10.5046619809915_3.34622084127599 chr12 105783920 105786055 + 3.34622084127599 NA intron (NM_011112, intron 1 of 21) CpG 285 NM_011112 18789 Mm.255877 NM_011112 ENSMUSG00000021111 Papola Pap|PapIII|Plap poly (A) polymerase alpha protein-coding common_peak1_16_141_-0.74621085853051_6.77664169023943_3.34580533853452 chr19 6085112 6085523 + 3.34580533853452 NA promoter-TSS (NM_024231) promoter-TSS (NM_024231) 220 NM_026410 67849 Mm.23526 NM_026410 ENSMUSG00000024791 Cdca5 2610036L13Rik|AL024086|AW536684|C85404 cell division cycle associated 5 protein-coding unique_peak2_16_141_-0.74621085853051_6.77664169023943_3.34580533853452-2 chr5 34550328 34551160 + 3.34580533853452 NA intron (NM_001145859, intron 1 of 12) intron (NM_001145859, intron 1 of 12) 1168 NM_001145859 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak1_16_141_-0.74621085853051_6.77664169023943_3.34580533853452-2 chr7 137476209 137476687 + 3.34580533853452 NA Intergenic Intergenic 38774 NR_033611 620016 Mm.388932 NR_033611 ENSMUSG00000100863 Gm12669 OTTMUSG00000007920 glutaredoxin 3 pseudogene pseudo unique_peak2_16_141_-0.74621085853051_6.77664169023943_3.34580533853452-3 chr8 120589128 120590049 + 3.34580533853452 NA promoter-TSS (NM_178856) promoter-TSS (NM_178856) -513 NM_178856 272551 Mm.275910 NM_178856 ENSMUSG00000031821 Gins2 2210013I18Rik|4833427B12Rik|AI323585|Pfs2 GINS complex subunit 2 (Psf2 homolog) protein-coding unique_peak2_16_141_-0.74621085853051_6.77664169023943_3.34580533853452 chr14 61338911 61340263 + 3.34580533853452 NA TTS (NM_026598) TTS (NM_026598) 20858 NM_026598 68177 Mm.22758 NM_026598 ENSMUSG00000021928 Ebpl 5730442K12Rik|EBRP emopamil binding protein-like protein-coding common_peak1_41_349_-0.447124156847474_8.22764903340859_3.3456838281636 chr17 56256823 56257600 + 3.3456838281636 NA exon (NM_010192, exon 1 of 1) exon (NM_010192, exon 1 of 1) 418 NM_010192 14154 Mm.290813 NM_010192 ENSMUSG00000043683 Fem1a AW611390|Fem1aa feminization 1 homolog a (C. elegans) protein-coding common_peak1_202_1557_0.18671990571637_10.6988394709199_3.34557596966848 chr5 73235990 73238333 + 3.34557596966848 NA intron (NM_028194, intron 1 of 62) MLT1H1|LTR|ERVL-MaLR 19457 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_64_335_0.384597097554137_8.58461597155583_3.34467781466107 chr1 60409375 60410224 + 3.34467781466107 NA 5' UTR (NM_001198571, exon 1 of 11) 5' UTR (NM_001198571, exon 1 of 11) 180 NM_001198570 329165 Mm.212066 NM_198127 ENSMUSG00000026782 Abi2 8430425M24Rik|AI839867|C130078H13 abl-interactor 2 protein-coding common_peak1_65_566_-0.343272666094991_8.97556859189473_3.34361034585034 chr12 113013807 113014884 + 3.34361034585034 NA promoter-TSS (NM_001081170) promoter-TSS (NM_001081170) -163 NM_001291445 217893 Mm.35754 NM_198165 ENSMUSG00000021143 Pacs2 6720425G15Rik|AW208651|AW489976|E230011J22|Pacs1l|mKIAA0602 phosphofurin acidic cluster sorting protein 2 protein-coding common_peak2_46_211_0.475210632862819_7.96552577099461_3.34313906207144 chr7 145283225 145284214 + 3.34313906207144 NA intron (NR_132644, intron 1 of 24) B4A|SINE|B4 292 NR_132644 233979 Mm.102235 NM_146206 ENSMUSG00000048677 Tpcn2 D830047E22Rik|Gm35086 two pore segment channel 2 protein-coding common_peak2_79_699_-0.306852261828841_9.29778498091791_3.34310563691957 chr7 127448056 127449309 + 3.34310563691957 NA exon (NM_175163, exon 1 of 3) exon (NM_175163, exon 1 of 3) 476 NM_175163 71131 Mm.474533 NM_175163 ENSMUSG00000048921 Zfp689 4933416E05Rik|Znf689 zinc finger protein 689 protein-coding common_peak1_46_393_-0.418920732030358_8.4125914534412_3.34258851755211 chr17 34170998 34171796 + 3.34258851755211 NA Intergenic MTD|LTR|ERVL-MaLR 15933 NM_013585 16912 Mm.390983 NM_013585 ENSMUSG00000096727 Psmb9 Lmp-2|Lmp2 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) protein-coding common_peak1_46_393_-0.418920732030358_8.4125914534412_3.34258851755211-2 chr3 14578446 14579309 + 3.34258851755211 NA exon (NM_007892, exon 1 of 8) exon (NM_007892, exon 1 of 8) 206 NM_007892 13559 Mm.153415 NM_007892 ENSMUSG00000027552 E2f5 AU024671|E2F-5 E2F transcription factor 5 protein-coding common_peak1_69_603_-0.330346713615189_9.07323138251748_3.34102993532718 chr14 55015445 55016429 + 3.34102993532718 NA intron (NM_026890, intron 1 of 10) intron (NM_026890, intron 1 of 10) 483 NM_026890 68966 Mm.21214 NM_026890 ENSMUSG00000022204 Ngdn 1500001L15Rik|Ngd|neuroguidin neuroguidin, EIF4E binding protein protein-coding common_peak1_260_2681_-0.152161175085338_11.3130129343618_3.34073613484027 chr1 80106504 80110050 + 3.34073613484027 NA Intergenic Intergenic 105667 NM_173425 241128 Mm.145511 NM_173425 ENSMUSG00000043230 Fam124b A830043J08Rik family with sequence similarity 124, member B protein-coding common_peak2_172_1262_0.206571607704996_10.4059247276401_3.34042559853282 chr19 43673598 43676163 + 3.34042559853282 NA promoter-TSS (NM_145156) promoter-TSS (NM_145156) 1 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 2210403D18Rik|Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding common_peak2_73_641_-0.320033524724536_9.16641272476003_3.33952328916758 chr9 54863617 54864586 + 3.33952328916758 NA intron (NM_022655, intron 1 of 21) CpG 346 NM_022655 64602 Mm.208991 NM_022655 ENSMUSG00000032293 Ireb2 D9Ertd85e|Irp2 iron responsive element binding protein 2 protein-coding common_peak1_73_401_0.355344271218838_8.82872382678835_3.33911154167169 chr15 82015436 82016445 + 3.33911154167169 NA promoter-TSS (NM_010247) promoter-TSS (NM_010247) 200 NM_134095 28075 Mm.474453 NM_134095 ENSMUSG00000022472 Desi1 AI427858|AI850401|D15Wsu75e|DeSI-1|Fam152b|Pppde2 desumoylating isopeptidase 1 protein-coding common_peak1_67_585_-0.337995971075365_9.02575886888457_3.3385329676785 chr5 114377381 114378517 + 3.3385329676785 NA intron (NM_026145, intron 1 of 6) intron (NM_026145, intron 1 of 6) 2556 NM_026145 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding common_peak2_47_401_-0.410663911900476_8.44571973522869_3.33851365225909 chr2 131186280 131187884 + 3.33851365225909 NA 5' UTR (NM_001111075, exon 1 of 15) 5' UTR (NM_001111075, exon 1 of 15) 134 NM_001111075 12531 Mm.38444 NM_023117 ENSMUSG00000027330 Cdc25b AI604853 cell division cycle 25B protein-coding common_peak1_93_558_0.303038925769185_9.27822393572778_3.33841768787371 chr6 129532706 129533870 + 3.33841768787371 NA promoter-TSS (NM_020590) promoter-TSS (NM_020590) -4 NR_045270 100504641 Mm.398286 NR_045270 ENSMUSG00000097675 1700101I11Rik - RIKEN cDNA 1700101I11 gene ncRNA common_peak1_149_1415_-0.210843530606972_10.3621837847795_3.33817870206743 chr19 32755690 32757448 + 3.33817870206743 NA Intergenic CpG -1008 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1 phosphatase and tensin homolog protein-coding common_peak1_54_464_-0.379795887609479_8.67118896219066_3.33782057024923 chr2 13408917 13409794 + 3.33782057024923 NA intron (NM_001081084, intron 27 of 66) B2_Mm1t|SINE|B2 82521 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak1_72_632_-0.323742663042713_9.14419035790699_3.33662583347907 chr2 48949415 48950274 + 3.33662583347907 NA promoter-TSS (NM_011958) promoter-TSS (NM_011958) 336 NM_029924 109241 Mm.440436 NM_029924 ENSMUSG00000036792 Mbd5 9430004D19Rik|AA536666|AI426407|C030040A15Rik|Gm1630|OTTMUSG00000012483 methyl-CpG binding domain protein 5 protein-coding common_peak1_136_1277_-0.223334564412136_10.2080048387409_3.33638392392132 chr5 129019294 129020881 + 3.33638392392132 NA promoter-TSS (NM_009391) promoter-TSS (NM_009391) -69 NM_009391 19384 Mm.297440 NM_009391 ENSMUSG00000029430 Ran - RAN, member RAS oncogene family protein-coding common_peak2_101_915_-0.264920699783131_9.70674343820538_3.3363759653305 chr11 22813275 22815794 + 3.3363759653305 NA Intergenic Intergenic 45201 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak2_121_1120_-0.239438800572097_10.0108511625194_3.33611633929429 chr1 191574052 191576584 + 3.33611633929429 NA promoter-TSS (NM_001306204) promoter-TSS (NM_001306204) 226 NM_001305233 76843 Mm.189102 NM_029766 ENSMUSG00000037474 Dtl 2810047L02Rik|5730564G15Rik|L2dtl|Ramp denticleless E3 ubiquitin protein ligase protein-coding common_peak2_72_394_0.356610183321163_8.80401393472505_3.33544051806919 chr5 24590884 24592631 + 3.33544051806919 NA promoter-TSS (NR_030423) promoter-TSS (NR_030423) -357 NR_030423 735264 NR_030423 ENSMUSG00000076387 Mir671 Mirn671|mmu-mir-671 microRNA 671 ncRNA common_peak1_72_394_0.356610183321163_8.80401393472505_3.33544051806919 chr11 84828354 84829089 + 3.33544051806919 NA promoter-TSS (NR_046281) promoter-TSS (NR_046281) 282 NM_177564 192970 Mm.192213 NM_177564 ENSMUSG00000034449 Dhrs11 - dehydrogenase/reductase (SDR family) member 11 protein-coding common_peak2_42_185_0.50656835914592_7.79244299068099_3.33509738649235-2 chr7 27481262 27482382 + 3.33509738649235 NA Intergenic Intergenic -5131 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding common_peak2_42_185_0.50656835914592_7.79244299068099_3.33509738649235 chr4 149690039 149691342 + 3.33509738649235 NA intron (NM_001029837, intron 1 of 23) ID4|SINE|ID 8018 NM_001164050 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_29_246_-0.539710798986975_7.67851183209119_3.33303563289303 chr15 79927217 79927758 + 3.33303563289303 NA intron (NM_144811, intron 2 of 6) intron (NM_144811, intron 2 of 6) 5159 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak1_510_5117_0.104490703611651_12.3736097838453_3.33273777937759 chr8 126590996 126596393 + 3.33273777937759 NA promoter-TSS (NM_001164598) promoter-TSS (NM_001164598) -258 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_188_1418_0.195084802044514_10.5682012750828_3.33256063353116 chr15 36647528 36650704 + 3.33256063353116 NA Intergenic Intergenic -40143 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak2_120_1109_-0.239777116602021_9.99645540293646_3.33128541024768-2 chr3 30968214 30970016 + 3.33128541024768 NA intron (NM_001165956, intron 1 of 15) CpG 300 NM_001165954 241915 Mm.233173 NM_153421 ENSMUSG00000037652 Phc3 E030046K01Rik|Edr3|Hph3 polyhomeotic-like 3 (Drosophila) protein-coding common_peak2_120_1109_-0.239777116602021_9.99645540293646_3.33128541024768 chr15 98533159 98534783 + 3.33128541024768 NA 5' UTR (NM_133714, exon 1 of 10) 5' UTR (NM_133714, exon 1 of 10) 298 NM_001289438 69612 Mm.229107 NM_133714 ENSMUSG00000022992 Kansl2 2310037I24Rik|B930009D17 KAT8 regulatory NSL complex subunit 2 protein-coding common_peak2_35_296_-0.483021447741743_7.97280839692989_3.33105094307642-2 chr13 53056608 53058221 + 3.33105094307642 NA Intergenic Intergenic -76375 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak2_35_296_-0.483021447741743_7.97280839692989_3.33105094307642 chr10 86846047 86847281 + 3.33105094307642 NA intron (NM_138673, intron 66 of 68) intron (NM_138673, intron 66 of 68) 67659 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding common_peak1_35_296_-0.483021447741743_7.97280839692989_3.33105094307642 chr7 127211296 127211848 + 3.33105094307642 NA promoter-TSS (NM_016754) promoter-TSS (NM_016754) -36 NM_016754 17907 Mm.14526 NM_016754 ENSMUSG00000030672 Mylpf 2410014J02Rik|MLC-2|Mlc2 myosin light chain, phosphorylatable, fast skeletal muscle protein-coding common_peak1_148_1404_-0.211429413000667_10.350639708608_3.33075729336335 chr4 46574671 46577194 + 3.33075729336335 NA intron (NM_001164804, intron 1 of 11) RLTR3_Mm|LTR|ERVK -9492 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak1_504_5819_-0.10184965731187_12.4558786091397_3.33066949438589 chr12 110497103 110501344 + 3.33066949438589 NA intron (NM_012023, intron 1 of 13) intron (NM_012023, intron 1 of 13) 13484 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_160_1148_0.215833830712866_10.2740799980025_3.33063247136768 chr1 138326689 138328950 + 3.33063247136768 NA Intergenic Intergenic 54081 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_21_180_-0.640048144389255_7.17982181488858_3.32973990767425 chr6 130165637 130166074 + 3.32973990767425 NA intron (NM_013793, intron 3 of 7) B1_Mur1|SINE|Alu -5107 NR_104105 654449 Mm.439698 NM_008461 ENSMUSG00000072721 Klra14-ps EG654449|Gm15858|Klra14|Klra29|Klra31|Ly49N|OTTMUSG00000026959 killer cell lectin-like receptor subfamily A, member 14, pseudogene pseudo common_peak2_605_6354_0.0939186110527768_12.6806357154187_3.32972527725122 chr18 35846434 35851897 + 3.32972527725122 NA intron (NM_133687, intron 1 of 2) intron (NM_133687, intron 1 of 2) 19347 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_91_542_0.306877038661861_9.23824690713529_3.3297238262771 chr3 139205171 139206229 + 3.3297238262771 NA promoter-TSS (NM_198659) promoter-TSS (NM_198659) -193 NM_198659 381476 Mm.188334 NM_198659 ENSMUSG00000047940 Stpg2 B930007M17Rik|Gm1017 sperm tail PG rich repeat containing 2 protein-coding common_peak1_120_785_0.258181342376842_9.74747617344703_3.32943896374159 chr9 120037844 120039509 + 3.32943896374159 NA Intergenic Intergenic -15078 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak1_256_2632_-0.152890156889386_11.2860467276014_3.32929678709013 chr11 107415913 107418297 + 3.32929678709013 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 53615 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_29_108_0.640472107820777_7.08842037868731_3.32899775192274 chr14 25466566 25467244 + 3.32899775192274 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 7720 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_114_733_0.266930138128616_9.65310132190752_3.32878565487217-2 chr12 102610870 102613619 + 3.32878565487217 NA intron (NM_172584, intron 3 of 9) intron (NM_172584, intron 3 of 9) 57275 NM_007693 12652 Mm.4137 NM_007693 ENSMUSG00000021194 Chga ChrA|cgA chromogranin A protein-coding common_peak2_114_733_0.266930138128616_9.65310132190752_3.32878565487217 chr10 12804785 12807858 + 3.32878565487217 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 55414 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_125_1161_-0.234172882266391_10.0653079122713_3.32850215550938 chr16 32277170 32278391 + 3.32850215550938 NA 5' UTR (NM_027355, exon 1 of 6) 5' UTR (NM_027355, exon 1 of 6) 319 NM_027355 70238 Mm.228263 NM_027355 ENSMUSG00000014074 Rnf168 3110001H15Rik ring finger protein 168 protein-coding common_peak1_48_410_-0.406118346770999_8.47993541029618_3.32673578693338 chr14 56667589 56668176 + 3.32673578693338 NA promoter-TSS (NM_023773) promoter-TSS (NM_023773) -366 NM_023773 75339 Mm.152466 NM_023773 ENSMUSG00000079184 Mphosph8 1500035L22Rik|4930548G07Rik|AU040635 M-phase phosphoprotein 8 protein-coding common_peak1_48_410_-0.406118346770999_8.47993541029618_3.32673578693338-2 chr2 166561316 166562305 + 3.32673578693338 NA Intergenic Intergenic -110908 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak2_56_482_-0.371380659285601_8.73018904919297_3.32671489154656 chr1 130515838 130518338 + 3.32671489154656 NA Intergenic Intergenic -54348 NM_010016 13136 Mm.101591 NM_010016 ENSMUSG00000026399 Cd55 Daf|Daf-GPI|Daf1|GPI-DAF CD55 molecule, decay accelerating factor for complement protein-coding common_peak2_376_3471_0.126116997142923_11.8246097310159_3.32662567390361 chr10 96179606 96183215 + 3.32662567390361 NA Intergenic Intergenic -44797 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_215_1690_0.178383555988679_10.8128527224043_3.32617033698021 chr5 30958929 30962638 + 3.32617033698021 NA promoter-TSS (NM_016703) promoter-TSS (NM_016703) -456 NM_001294302 50907 Mm.272414 NM_016703 ENSMUSG00000045302 Preb C85705 prolactin regulatory element binding protein-coding unique_peak2_7_72_-1.12018360694121_5.62973275540941_3.32601074046836-2 chr9 27193657 27194170 + 3.32601074046836 NA Intergenic Intergenic -38492 NM_023277 83964 Mm.28770 NM_023277 ENSMUSG00000031990 Jam3 1110002N23Rik|JAM-3|JAM-C|Jcam3 junction adhesion molecule 3 protein-coding unique_peak2_7_72_-1.12018360694121_5.62973275540941_3.32601074046836 chr6 73210759 73211358 + 3.32601074046836 NA intron (NM_001164669, intron 2 of 76) ORR1F|LTR|ERVL-MaLR 10573 NM_001164669 330355 Mm.333166 NM_001164669 ENSMUSG00000052861 Dnah6 9830168K20|A730004I20Rik|Dnahc6|mKIAA1697|mdhc6 dynein, axonemal, heavy chain 6 protein-coding common_peak1_203_1568_0.185265762532071_10.7082625182341_3.32556604317926 chr4 41134876 41136861 + 3.32556604317926 NA promoter-TSS (NM_026275) promoter-TSS (NM_026275) -153 NM_026275 67615 Mm.389540 NM_026275 ENSMUSG00000036241 Ube2r2 1200003M11Rik|Cdc34b|Ubc3b ubiquitin-conjugating enzyme E2R 2 protein-coding common_peak1_163_1567_-0.200041956677069_10.5146888657767_3.32541565666168 chr12 85373595 85375499 + 3.32541565666168 NA exon (NM_026775, exon 1 of 5) exon (NM_026775, exon 1 of 5) 170 NM_026775 68581 Mm.379159 NM_026775 ENSMUSG00000021248 Tmed10 1110014C03Rik|Tmp21|p23|p24delta1 transmembrane p24 trafficking protein 10 protein-coding common_peak2_27_229_-0.558925300926449_7.56602740048115_3.32496026465418 chr8 57510942 57511744 + 3.32496026465418 NA promoter-TSS (NM_008252) promoter-TSS (NM_008252) -500 NM_008252 97165 Mm.276881 NM_008252 ENSMUSG00000054717 Hmgb2 C80539|HMG-2|Hmg2 high mobility group box 2 protein-coding common_peak1_27_229_-0.558925300926449_7.56602740048115_3.32496026465418-2 chr2 79050248 79050904 + 3.32496026465418 NA Intergenic Intergenic 181529 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_27_229_-0.558925300926449_7.56602740048115_3.32496026465418 chr11 83291150 83291615 + 3.32496026465418 NA promoter-TSS (NR_028363) promoter-TSS (NR_028363) -317 NR_028363 613254 Mm.383758 NR_028363 ENSMUSG00000093483 AA465934 - expressed sequence AA465934 ncRNA common_peak2_32_271_-0.510142893589459_7.83239139445561_3.3243462567733 chr17 25823201 25824203 + 3.3243462567733 NA promoter-TSS (NM_173741) promoter-TSS (NM_173741) 75 NM_173741 268933 Mm.95512 NM_173741 ENSMUSG00000025737 Wdr24 BC037651 WD repeat domain 24 protein-coding common_peak1_21_66_0.793708552236179_6.46294346657586_3.32252308931083-2 chr2 38926028 38926407 + 3.32252308931083 NA exon (NM_010264, exon 1 of 11) exon (NM_010264, exon 1 of 11) 244 NM_010264 14536 Mm.439703 NM_010264 ENSMUSG00000063972 Nr6a1 1700113M01Rik|Gcnf|NCNF|RTR nuclear receptor subfamily 6, group A, member 1 protein-coding common_peak1_21_66_0.793708552236179_6.46294346657586_3.32252308931083 chr17 17597687 17598133 + 3.32252308931083 NA intron (NM_172827, intron 1 of 17) Lx3B|LINE|L1 26579 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_21_66_0.793708552236179_6.46294346657586_3.32252308931083-3 chr4 136148250 136148704 + 3.32252308931083 NA Intergenic CpG 4655 NM_008321 15903 Mm.110 NM_008321 ENSMUSG00000007872 Id3 Hlh462|Idb3|bHLHb25 inhibitor of DNA binding 3 protein-coding common_peak2_21_66_0.793708552236179_6.46294346657586_3.32252308931083 chr11 21241232 21241853 + 3.32252308931083 NA intron (NM_001290628, intron 1 of 22) intron (NM_001290628, intron 1 of 22) 2510 NM_001290628 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak2_21_66_0.793708552236179_6.46294346657586_3.32252308931083-2 chr11 120086298 120086857 + 3.32252308931083 NA intron (NM_009734, intron 1 of 25) CpG 250 NM_009734 12009 Mm.2556 NM_009734 ENSMUSG00000039781 Cep131 AZ1|Azi|Azi1 centrosomal protein 131 protein-coding common_peak1_21_66_0.793708552236179_6.46294346657586_3.32252308931083-5 chr8 122695774 122696193 + 3.32252308931083 NA intron (NM_009824, intron 1 of 11) intron (NM_009824, intron 1 of 11) 3126 NM_009824 12398 Mm.194339 NM_009824 ENSMUSG00000006362 Cbfa2t3 A630044F12Rik|AI465270|AW229127|Cbfa2t3h|ETO-2|Eto2|MTGR2 core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) protein-coding common_peak1_21_66_0.793708552236179_6.46294346657586_3.32252308931083-4 chr6 58640331 58640802 + 3.32252308931083 NA intron (NM_011920, intron 1 of 15) CpG 43894 NM_011920 26357 Mm.333096 NM_011920 ENSMUSG00000029802 Abcg2 ABC15|ABCP|AI428558|BCRP|Bcrp1|MXR|MXR1 ATP-binding cassette, sub-family G (WHITE), member 2 protein-coding common_peak2_187_1409_0.194876262512576_10.5589175785424_3.32207530350719 chr11 103411663 103413829 + 3.32207530350719 NA promoter-TSS (NM_183034) promoter-TSS (NM_183034) -82 NM_183034 353047 Mm.18556 NM_183034 ENSMUSG00000034247 Plekhm1 AP162|B2|BC038943|D330036J23Rik pleckstrin homology domain containing, family M (with RUN domain) member 1 protein-coding unique_peak2_15_133_-0.769835927332604_6.68117122679147_3.32099502010001 chr8 120888283 120889263 + 3.32099502010001 NA Intergenic Intergenic 150134 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_15_133_-0.769835927332604_6.68117122679147_3.32099502010001-2 chr9 120067113 120067601 + 3.32099502010001 NA intron (NM_009987, intron 1 of 1) intron (NM_009987, intron 1 of 1) 939 NM_009987 13051 Mm.44065 NM_009987 ENSMUSG00000052336 Cx3cr1 - chemokine (C-X3-C motif) receptor 1 protein-coding common_peak1_15_133_-0.769835927332604_6.68117122679147_3.32099502010001 chr4 125173597 125174043 + 3.32099502010001 NA Intergenic Intergenic -45939 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak1_113_725_0.26728529274078_9.63746838436614_3.32034641857957 chr7 66119610 66121550 + 3.32034641857957 NA intron (NM_001081163, intron 1 of 2) intron (NM_001081163, intron 1 of 2) 11065 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_180_1755_-0.188869814058997_10.6836422225059_3.32028780580625 chr11 116130172 116131812 + 3.32028780580625 NA TTS (NM_024177) TTS (NM_024177) 136 NM_178802 338364 Mm.439976 NM_178802 ENSMUSG00000054517 Trim65 4732463G12Rik tripartite motif-containing 65 protein-coding common_peak2_87_776_-0.288748423341048_9.45739657673719_3.32021335926276 chr5 24586103 24587634 + 3.32021335926276 NA 5' UTR (NM_133913, exon 1 of 4) 5' UTR (NM_133913, exon 1 of 4) 118 NM_133913 100910 Mm.140672 NM_133913 ENSMUSG00000038181 Chpf2 2010209O12Rik|AW060945|mKIAA1402|mir-671 chondroitin polymerizing factor 2 protein-coding common_peak2_138_1297_-0.220089887206537_10.2320297243959_3.32012689574365 chr12 70135381 70137701 + 3.32012689574365 NA Intergenic Intergenic -17630 NM_001195033 100504285 Mm.291105 NM_001195033 ENSMUSG00000090121 Abhd12b Gm804 abhydrolase domain containing 12B protein-coding common_peak2_43_366_-0.433226198962906_8.30302315336176_3.31939335683867 chr8 36172610 36174150 + 3.31939335683867 NA Intergenic Intergenic 76136 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding common_peak1_43_366_-0.433226198962906_8.30302315336176_3.31939335683867 chr7 45714810 45715291 + 3.31939335683867 NA 5' UTR (NM_020011, exon 1 of 6) 5' UTR (NM_020011, exon 1 of 6) 157 NM_020011 56632 Mm.24222 NM_020011 ENSMUSG00000057342 Sphk2 C76851 sphingosine kinase 2 protein-coding common_peak2_247_2525_-0.156119785494178_11.2245790310405_3.31880548737224 chr2 122027391 122030270 + 3.31880548737224 NA exon (NM_144545, exon 2 of 8) exon (NM_144545, exon 2 of 8) 247 NM_001256055 100042807 Mm.329403 NM_001256055 ENSMUSG00000043424 Eif3j2 ENSMUSG00000043424|Eif3j-2|Gm9781|eIF3 p35|eIF3j-B eukaryotic translation initiation factor 3, subunit J2 protein-coding common_peak2_162_1556_-0.200708785157667_10.5041988365002_3.31715852037011 chr17 33683960 33686047 + 3.31715852037011 NA TTS (NM_145486) TTS (NM_145486) 455 NM_001109913 76936 Mm.311439 NM_029804 ENSMUSG00000059208 Hnrnpm 2610023M21Rik|AA409009|Hnrpm|mKIAA4193 heterogeneous nuclear ribonucleoprotein M protein-coding common_peak1_205_1588_0.184256785614577_10.7260318021558_3.31671774252288 chr2 92458331 92460860 + 3.31671774252288 NA 5' UTR (NM_211358, exon 1 of 2) 5' UTR (NM_211358, exon 1 of 2) 199 NM_211358 228368 Mm.273990 NM_145832 ENSMUSG00000049922 Slc35c1 E430007K15Rik|fuct1 solute carrier family 35, member C1 protein-coding common_peak1_202_1558_0.185794211080253_10.6993023182379_3.31652457684066 chr2 158722259 158724279 + 3.31652457684066 NA intron (NM_153089, intron 2 of 10) intron (NM_153089, intron 2 of 10) -44830 NM_027975 71878 Mm.85162 NM_027975 ENSMUSG00000027654 Fam83d 2310007D09Rik|BB104611 family with sequence similarity 83, member D protein-coding common_peak2_32_125_0.600040024160963_7.2772999355804_3.31651528838948 chr12 57211388 57212367 + 3.31651528838948 NA Intergenic Intergenic -14405 NM_172577 217593 Mm.32835 NM_172577 ENSMUSG00000035472 Slc25a21 9930033G19Rik|A630030I10|BB158148 solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 protein-coding common_peak1_27_97_0.671854905902717_6.95063729706657_3.31642260829108 chr11 108249912 108250526 + 3.31642260829108 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 93669 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_27_97_0.671854905902717_6.95063729706657_3.31642260829108-2 chr3 136611874 136612449 + 3.31642260829108 NA Intergenic Intergenic -57905 NM_008913 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding unique_peak2_18_156_-0.694256545494737_6.94749247614426_3.31642260829108-2 chr18 24470443 24471223 + 3.31642260829108 NA promoter-TSS (NM_026529) promoter-TSS (NM_026529) -38 NM_026529 68046 Mm.276574 NM_026529 ENSMUSG00000024273 2700062C07Rik AI195775|C87515 RIKEN cDNA 2700062C07 gene protein-coding unique_peak2_18_156_-0.694256545494737_6.94749247614426_3.31642260829108 chr1 95450475 95451472 + 3.31642260829108 NA Intergenic Intergenic 137345 NM_026321 67698 Mm.272705 NM_026321 ENSMUSG00000051185 Fam174a 2310044D20Rik|Fam174|Naa6|Tmem157 family with sequence similarity 174, member A protein-coding unique_peak2_18_156_-0.694256545494737_6.94749247614426_3.31642260829108-3 chr2 132649025 132650165 + 3.31642260829108 NA non-coding (NR_033469, exon 4 of 4) non-coding (NR_033469, exon 4 of 4) -40688 NM_028637 73747 Mm.284114 NM_028637 ENSMUSG00000044991 1110034G24Rik - RIKEN cDNA 1110034G24 gene protein-coding unique_peak2_27_97_0.671854905902717_6.95063729706657_3.31642260829108 chr12 55433814 55434467 + 3.31642260829108 NA intron (NR_035430, intron 1 of 3) intron (NR_035430, intron 1 of 3) 35315 NM_011968 26443 Mm.30210 NM_011968 ENSMUSG00000021024 Psma6 IOTA proteasome (prosome, macropain) subunit, alpha type 6 protein-coding common_peak1_166_1206_0.209536644932937_10.3419782832215_3.31640148305114 chr7 66187449 66189813 + 3.31640148305114 NA Intergenic MLT1K|LTR|ERVL-MaLR 79116 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_112_716_0.269690189470497_9.62067440343715_3.31582323095411 chr16 49792529 49794022 + 3.31582323095411 NA Intergenic Intergenic -62379 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_150_1425_-0.209237881458337_10.3731393257147_3.31528578337313 chr9 92383131 92385121 + 3.31528578337313 NA Intergenic Intergenic -73252 NM_178711 235527 Mm.55289 NM_178711 ENSMUSG00000032377 Plscr4 AV245873 phospholipid scramblase 4 protein-coding common_peak2_128_1192_-0.230516641287995_10.1051200070512_3.31465962165747 chrX 20289180 20292209 + 3.31465962165747 NA intron (NM_177353, intron 1 of 16) intron (NM_177353, intron 1 of 16) 1070 NM_177353 236727 Mm.132983 NM_177353 ENSMUSG00000037341 Slc9a7 A530087D17Rik|NHE7 solute carrier family 9 (sodium/hydrogen exchanger), member 7 protein-coding common_peak2_165_1588_-0.197785228993816_10.5350107948516_3.31326916667861 chr5 73291996 73293896 + 3.31326916667861 NA 5' UTR (NM_023429, exon 1 of 9) 5' UTR (NM_023429, exon 1 of 9) 152 NM_001159888 68095 Mm.247039 NM_023429 ENSMUSG00000029152 Ociad1 6030432N09Rik|AI481327|AW557942|Asrij|B230209J16Rik|BB021357|Emi2|Imi2|OCIA|TPA018 OCIA domain containing 1 protein-coding common_peak2_105_657_0.280410302894227_9.50214892518235_3.31306618853717 chr2 11704945 11706646 + 3.31306618853717 NA promoter-TSS (NM_008358) promoter-TSS (NM_008358) 83 NM_001271500 16169 Mm.200196 NM_008358 ENSMUSG00000023206 Il15ra AA690181|IL-15RA interleukin 15 receptor, alpha chain protein-coding common_peak1_172_1665_-0.192962153872999_10.605691608429_3.31243957116482 chr2 29724155 29726617 + 3.31243957116482 NA intron (NM_054050, intron 13 of 23) intron (NM_054050, intron 13 of 23) -36142 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak1_104_945_-0.260116142662575_9.75563830200811_3.31193734821513 chr19 4297263 4298803 + 3.31193734821513 NA intron (NM_001290818, intron 1 of 20) intron (NM_001290818, intron 1 of 20) 8189 NM_130863 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak2_58_501_-0.366017148908947_8.7885349794963_3.31161923524051 chrX 51204207 51206324 + 3.31161923524051 NA intron (NM_134163, intron 1 of 7) CpG 725 NM_001310515 171170 Mm.295324 NM_134163 ENSMUSG00000036109 Mbnl3 A530038J18Rik|AI661274|CHCR|E430034C16Rik|MBLX|MBLX39|MBXL muscleblind-like 3 (Drosophila) protein-coding common_peak1_43_192_0.493953016612227_7.83943354557419_3.31118281467019-3 chr8 31150427 31150841 + 3.31118281467019 NA non-coding (NR_103719, exon 1 of 8) non-coding (NR_103719, exon 1 of 8) 318 NR_103719 234138 Mm.349800 NM_144927 ENSMUSG00000031577 Tti2 - TELO2 interacting protein 2 protein-coding unique_peak2_43_192_0.493953016612227_7.83943354557419_3.31118281467019 chr10 93360029 93361417 + 3.31118281467019 NA Intergenic Intergenic 24491 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak1_43_192_0.493953016612227_7.83943354557419_3.31118281467019-2 chr2 75639370 75640122 + 3.31118281467019 NA Intergenic MMVL30-int|LTR|ERV1 -19513 NM_146130 229279 Mm.316306 NM_053263 ENSMUSG00000059005 Hnrnpa3 2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3 heterogeneous nuclear ribonucleoprotein A3 protein-coding common_peak1_43_192_0.493953016612227_7.83943354557419_3.31118281467019 chr19 44554800 44555651 + 3.31118281467019 NA intron (NM_026061, intron 1 of 4) CpG-7549 190 NM_026061 67264 Mm.2060 NM_026061 ENSMUSG00000025204 Ndufb8 2900010I05Rik|AI987932 NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 protein-coding common_peak2_308_2689_0.142291942486036_11.464536428687_3.31115712512177 chr11 116409287 116413983 + 3.31115712512177 NA intron (NM_027258, intron 1 of 18) intron (NM_027258, intron 1 of 18) 1397 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_23_76_0.746988927397194_6.6402810043935_3.31054323229371 chr9 20642623 20643151 + 3.31054323229371 NA promoter-TSS (NM_013911) promoter-TSS (NM_013911) -81 NM_013911 30843 Mm.24608 NM_013911 ENSMUSG00000066892 Fbxl12 3110048D16Rik|Fbl12 F-box and leucine-rich repeat protein 12 protein-coding common_peak2_122_1129_-0.236529276083839_10.0238424192606_3.30989349050306 chr13 69533057 69535562 + 3.30989349050306 NA promoter-TSS (NM_001169131) promoter-TSS (NM_001169131) -445 NM_001169131 210106 Mm.315959 NM_198600 ENSMUSG00000034575 Papd7 LAK-1|POLK|Pols|TRF4|TRF4-1 PAP associated domain containing 7 protein-coding common_peak1_85_494_0.321054766473333_9.11181209820364_3.30985212958562 chr5 115299874 115301056 + 3.30985212958562 NA promoter-TSS (NR_131932) promoter-TSS (NR_131932) 525 NM_019682 56455 Mm.256858 NM_019682 ENSMUSG00000009013 Dynll1 Dlc8|Dnclc1|Pin dynein light chain LC8-type 1 protein-coding common_peak2_154_1093_0.21939076882007_10.2050924072026_3.30944149634171 chr16 87454451 87456169 + 3.30944149634171 NA intron (NM_024258, intron 1 of 17) CpG 325 NM_024258 74112 Mm.152941 NM_024258 ENSMUSG00000025616 Usp16 1200004E02Rik|2810483I07Rik|6330514E22Rik|UBPM ubiquitin specific peptidase 16 protein-coding common_peak1_25_213_-0.586045741760215_7.44844411552104_3.3094180636527-4 chrX 136990869 136991437 + 3.3094180636527 NA intron (NM_001082412, intron 6 of 6) intron (NM_001082412, intron 6 of 6) 1879 NM_001114179 67062 Mm.276518 NM_001082412 ENSMUSG00000044348 Slc25a53 2310046F18Rik|2810402A17Rik|AI448995|AI841128|Mcart6 solute carrier family 25, member 53 protein-coding common_peak1_25_213_-0.586045741760215_7.44844411552104_3.3094180636527 chr1 165709830 165710409 + 3.3094180636527 NA Intergenic Intergenic -2025 NM_001038846 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding common_peak1_25_213_-0.586045741760215_7.44844411552104_3.3094180636527-2 chr10 19517036 19517462 + 3.3094180636527 NA Intergenic Intergenic -74709 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_25_213_-0.586045741760215_7.44844411552104_3.3094180636527-3 chr10 19691226 19691819 + 3.3094180636527 NA Intergenic Intergenic -21065 NM_172786 237313 Mm.234667 NM_172786 ENSMUSG00000020007 Il20ra E230031K19 interleukin 20 receptor, alpha protein-coding common_peak2_522_5272_0.102523224546443_12.4156698936531_3.30714672357943 chr4 122882227 122887799 + 3.30714672357943 NA intron (NM_007598, intron 1 of 12) intron (NM_007598, intron 1 of 12) 1044 NM_007598 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak2_82_727_-0.298288771030348_9.35865025468352_3.30667602528872 chrX 50873176 50875800 + 3.30667602528872 NA intron (NM_001313744, intron 3 of 11) intron (NM_001313744, intron 3 of 11) 33117 NM_001313744 70415 Mm.46254 NM_133729 ENSMUSG00000031112 Stk26 2610018G03Rik|Mst4 serine/threonine kinase 26 protein-coding common_peak1_82_727_-0.298288771030348_9.35865025468352_3.30667602528872 chr12 32292060 32293084 + 3.30667602528872 NA Intergenic Intergenic -83923 NM_001146200 30955 Mm.101369 NM_020272 ENSMUSG00000020573 Pik3cg 5830428L06Rik|PI3Kgamma|p110gamma phosphoinositide-3-kinase, catalytic, gamma polypeptide protein-coding common_peak2_319_2813_0.139176859139665_11.5279950428064_3.3065628207904 chr2 103795334 103798179 + 3.3065628207904 NA exon (NM_001111292, exon 1 of 17) exon (NM_001111292, exon 1 of 17) 322 NM_001111290 53872 Mm.427589 NM_016739 ENSMUSG00000027184 Caprin1 AL022980|Caprin-1|Gpiap|Gpiap1|Mmgpip137|P137|rng105 cell cycle associated protein 1 protein-coding common_peak1_50_428_-0.397163060372089_8.5462523073135_3.30652270028186 chr7 90138102 90139174 + 3.30652270028186 NA intron (NM_001252520, intron 1 of 20) intron (NM_001252520, intron 1 of 20) 8406 NM_001252520 233489 Mm.235175 NM_146194 ENSMUSG00000039361 Picalm CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114 phosphatidylinositol binding clathrin assembly protein protein-coding unique_peak2_8_79_-1.04385504420105_5.80000057278684_3.30455250786927 chr5 143004734 143005371 + 3.30455250786927 NA intron (NM_207110, intron 15 of 16) IAPEz-int|LTR|ERVK 44697 NM_007984 14086 Mm.289707 NM_007984 ENSMUSG00000029581 Fscn1 AI663989|Fan1|fascin-1 fascin actin-bundling protein 1 protein-coding common_peak1_15_39_0.974325168237805_5.80909067900627_3.30455250786927 chr2 122765381 122765771 + 3.30455250786927 NA intron (NM_001162503, intron 1 of 9) intron (NM_001162503, intron 1 of 9) 217 NM_001162503 59010 Mm.28986 NM_021507 ENSMUSG00000005803 Sqrdl 0610039J17Rik|4930557M22Rik|SQOR sulfide quinone reductase-like (yeast) protein-coding unique_peak2_39_167_0.525429116038372_7.65503198079795_3.30443449614028 chr11 59403999 59405126 + 3.30443449614028 NA Intergenic B3|SINE|B2 -28909 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak1_178_1732_-0.189511353737402_10.6643002622915_3.30422496460184 chr4 101252511 101255035 + 3.30422496460184 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 11509 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_168_1225_0.208070584838628_10.3637785561101_3.30317636383671 chr2 128189002 128191389 + 3.30317636383671 NA Intergenic Intergenic 62620 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak1_62_537_-0.349853202604841_8.8965357612542_3.30279728724329 chr4 32055272 32055932 + 3.30279728724329 NA Intergenic Intergenic 91495 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_58_293_0.405854060205462_8.40259937493909_3.30258592376516-2 chr9 41007123 41008093 + 3.30258592376516 NA Intergenic MER34A1|LTR|ERV1 -2980 NM_019465 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak1_58_293_0.405854060205462_8.40259937493909_3.30258592376516 chr15 76232177 76233118 + 3.30258592376516 NA TTS (NM_001163576) TTS (NM_001163576) -1269 NM_011117 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_58_293_0.405854060205462_8.40259937493909_3.30258592376516-2 chr6 29768336 29769278 + 3.30258592376516 NA exon (NM_021414, exon 1 of 17) exon (NM_021414, exon 1 of 17) 364 NM_001171000 74340 Mm.210899 NM_021414 ENSMUSG00000029772 Ahcyl2 4631427C17Rik|AI227036|Adohcyase3|mKIAA0828 S-adenosylhomocysteine hydrolase-like 2 protein-coding common_peak2_58_293_0.405854060205462_8.40259937493909_3.30258592376516 chr11 77371221 77372987 + 3.30258592376516 NA intron (NM_001291190, intron 1 of 13) B3|SINE|B2 23824 NM_001291190 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot homolog 2 (Drosophila) protein-coding common_peak1_36_305_-0.477604191481241_8.01858574695203_3.30258421278169 chr7 106257543 106258140 + 3.30258421278169 NA Intergenic RMER5|LTR|ERV1 -42501 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak1_33_279_-0.49913444478444_7.87971579455275_3.30235151036528 chr16 96272718 96273299 + 3.30235151036528 NA intron (NM_001122993, intron 2 of 3) intron (NM_001122993, intron 2 of 3) -8024 NM_033149 93961 Mm.154783 NM_033149 ENSMUSG00000074892 B3galt5 1190002B21Rik|AU045265|b3Galt-V UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 protein-coding common_peak1_84_487_0.320904510289605_9.09118959270769_3.30206825768823 chr6 47672285 47673521 + 3.30206825768823 NA promoter-TSS (NR_002841).8 promoter-TSS (NR_002841).8 -504 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_84_487_0.320904510289605_9.09118959270769_3.30206825768823-2 chr8 84249133 84249985 + 3.30206825768823 NA intron (NM_001007571, intron 1 of 2) CpG-14265 202 NM_001007571 101966 Mm.200723 NM_001007571 ENSMUSG00000019362 D8Ertd738e AA589584 DNA segment, Chr 8, ERATO Doi 738, expressed protein-coding common_peak1_14_125_-0.795235802088569_6.57966202245563_3.30158188014948-2 chr7 63924820 63925154 + 3.30158188014948 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) 8130 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak2_14_125_-0.795235802088569_6.57966202245563_3.30158188014948 chr16 49781420 49782462 + 3.30158188014948 NA Intergenic Intergenic -73713 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_14_125_-0.795235802088569_6.57966202245563_3.30158188014948 chr18 80533894 80534312 + 3.30158188014948 NA Intergenic Intergenic 10443 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak2_9_86_-0.978421579404309_5.95373270614657_3.30107820443181-3 chr9 67164865 67165577 + 3.30107820443181 NA Intergenic B4A|SINE|B4 31660 NR_045748 100502636 Mm.412607 NR_045748 ENSMUSG00000111556 Gm19299 - predicted gene, 19299 ncRNA unique_peak2_9_86_-0.978421579404309_5.95373270614657_3.30107820443181 chr7 127085137 127085731 + 3.30107820443181 NA Intergenic B4A|SINE|B4 -6002 NM_178901 101602 Mm.490357 NM_178901 ENSMUSG00000045165 AI467606 - expressed sequence AI467606 protein-coding unique_peak2_9_86_-0.978421579404309_5.95373270614657_3.30107820443181-2 chr8 83768435 83769048 + 3.30107820443181 NA Intergenic MLTR11B|LTR|ERVK -27430 NM_001163031 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak1_148_1403_-0.21040221819694_10.3501261112061_3.30023562634842 chr2 155517374 155519112 + 3.30023562634842 NA exon (NM_019811, exon 1 of 18) exon (NM_019811, exon 1 of 18) 200 NM_019811 60525 Mm.255026 NM_019811 ENSMUSG00000027605 Acss2 1110017C11Rik|ACAS|Acas1|Acas2|AceCS1|Acs1 acyl-CoA synthetase short-chain family member 2 protein-coding common_peak1_78_688_-0.306261081590975_9.2752296319088_3.29972128258428 chr4 16162615 16163735 + 3.29972128258428 NA promoter-TSS (NR_045765) promoter-TSS (NR_045765) 323 NM_138952 192656 Mm.112765 NM_138952 ENSMUSG00000041135 Ripk2 2210420D18Rik|CARD3|CARDIAK|CCK|D4Bwg0615e|RICK|RIP2 receptor (TNFRSF)-interacting serine-threonine kinase 2 protein-coding common_peak1_18_52_0.872443748833692_6.16414232898004_3.29877744900367 chr10 61205259 61205673 + 3.29877744900367 NA exon (NM_001081127, exon 17 of 22) exon (NM_001081127, exon 17 of 22) 30204 NM_023064 65971 Mm.30227 NM_023064 ENSMUSG00000020096 Tbata 1700021K02Rik|AI428928|Spatial|Titest thymus, brain and testes associated protein-coding common_peak1_18_52_0.872443748833692_6.16414232898004_3.29877744900367-2 chr2 103659964 103660394 + 3.29877744900367 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 93869 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak1_18_52_0.872443748833692_6.16414232898004_3.29877744900367-3 chr3 19306134 19306598 + 3.29877744900367 NA intron (NM_001122759, intron 1 of 12) intron (NM_001122759, intron 1 of 12) 4956 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak2_59_300_0.401649067024358_8.43444421027188_3.2987210793827 chr11 46390953 46392788 + 3.2987210793827 NA intron (NR_105955, intron 2 of 4) intron (NR_105955, intron 2 of 4) -2355 NM_001281965 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding common_peak1_51_437_-0.392753503773886_8.57841030771423_3.29793904644256 chrX 8132143 8132753 + 3.29793904644256 NA 5' UTR (NM_028542, exon 1 of 9) 5' UTR (NM_028542, exon 1 of 9) 410 NM_001290783 73447 Mm.284162 NM_026137 ENSMUSG00000031166 Wdr13 1700060B08Rik|5730411P10Rik|DXHXS7467e|W51679|mMg21 WD repeat domain 13 protein-coding common_peak2_92_825_-0.279181250531856_9.55040734615352_3.2954866037036 chr1 172632281 172633686 + 3.2954866037036 NA promoter-TSS (NM_026725) promoter-TSS (NM_026725) -9 NM_026725 68440 Mm.33024 NM_026725 ENSMUSG00000026544 Dusp23 1300005N15Rik|LDP-3 dual specificity phosphatase 23 protein-coding common_peak2_77_679_-0.309835175343485_9.25447334846596_3.29506407387115 chr4 150544058 150546040 + 3.29506407387115 NA intron (NM_001085492, intron 11 of 22) intron (NM_001085492, intron 11 of 22) 107125 NM_173774 242773 Mm.29280 NM_173774 ENSMUSG00000039838 Slc45a1 C230078B22|Dnb5 solute carrier family 45, member 1 protein-coding common_peak2_61_314_0.394086497533383_8.49625126715397_3.2932734181929 chr2 33034595 33036193 + 3.2932734181929 NA intron (NM_178888, intron 8 of 28) intron (NM_178888, intron 8 of 28) 51810 NM_178888 99326 Mm.41290 NM_178888 ENSMUSG00000038860 Garnl3 AW120551 GTPase activating RANGAP domain-like 3 protein-coding common_peak1_61_314_0.394086497533383_8.49625126715397_3.2932734181929 chr5 135064110 135064980 + 3.2932734181929 NA exon (NM_025362, exon 1 of 1) exon (NM_025362, exon 1 of 1) 121 NM_025375 66138 Mm.439878 NM_025375 ENSMUSG00000005378 Wbscr22 1110003N24Rik Williams Beuren syndrome chromosome region 22 protein-coding common_peak2_126_839_0.247965176507922_9.83822810592008_3.29317723670415 chr7 4297259 4301826 + 3.29317723670415 NA Intergenic Intergenic 25353 NM_008848 18729 Mm.326531 NM_008848 Pira6 12M1|Pira10|p91B paired-Ig-like receptor A6 protein-coding common_peak2_147_1392_-0.210971269017129_10.3384939080927_3.29277906697504 chr11 32583039 32588798 + 3.29277906697504 NA intron (NM_009288, intron 4 of 18) RSINE1|SINE|B4 52652 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_25_87_0.695989626003635_6.80742643163912_3.29175504965686-3 chrX 48513444 48513965 + 3.29175504965686 NA promoter-TSS (NM_012019) promoter-TSS (NM_012019) -141 NM_012019 26926 Mm.240434 NM_012019 ENSMUSG00000036932 Aifm1 AIF|AIFsh2|Hq|Pdcd8 apoptosis-inducing factor, mitochondrion-associated 1 protein-coding common_peak1_25_87_0.695989626003635_6.80742643163912_3.29175504965686-2 chr7 90346372 90346866 + 3.29175504965686 NA intron (NM_001289583, intron 1 of 19) ORR1A0|LTR|ERVL-MaLR -40362 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_25_87_0.695989626003635_6.80742643163912_3.29175504965686 chr2 128155946 128156538 + 3.29175504965686 NA intron (NM_009754, intron 3 of 3) (CACAC)n|Simple_repeat|Simple_repeat 28667 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_25_87_0.695989626003635_6.80742643163912_3.29175504965686 chr9 110100572 110101123 + 3.29175504965686 NA exon (NM_001252683, exon 1 of 19) exon (NM_001252683, exon 1 of 19) 240 NM_001252683 72831 Mm.276305 NM_133347 ENSMUSG00000032480 Dhx30 2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein-coding common_peak2_67_584_-0.335531931123883_9.02452684890882_3.29128692782423 chr3 115681610 115683975 + 3.29128692782423 NA Intergenic Intergenic 32263 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding unique_peak2_28_237_-0.546154448795376_7.62174053891026_3.29096925231145 chr19 5793748 5795487 + 3.29096925231145 NA Intergenic MTA_Mm|LTR|ERVL-MaLR 8054 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_53_454_-0.380902857060107_8.639271306556_3.29096486093922 chr16 46021678 46023429 + 3.29096486093922 NA Intergenic Intergenic -12140 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding unique_peak2_11_101_-0.885262185065756_6.22979424943862_3.29067865017931 chr15 60151037 60151803 + 3.29067865017931 NA Intergenic Intergenic -134802 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_11_101_-0.885262185065756_6.22979424943862_3.29067865017931 chr2 117352397 117352768 + 3.29067865017931 NA Intergenic Intergenic -9705 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_239_1940_0.165908963443108_11.0055388844352_3.28960335147858 chr19 7293653 7295945 + 3.28960335147858 NA intron (NM_001080388, intron 1 of 16) intron (NM_001080388, intron 1 of 16) 648 NM_001080390 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak1_78_440_0.337464245555795_8.95336696833542_3.28938420162194 chr4 135018279 135019266 + 3.28938420162194 NA Intergenic Intergenic 87792 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding common_peak1_120_786_0.256347019127961_9.74839333507147_3.28870016190347 chr12 84244949 84246780 + 3.28870016190347 NA Intergenic Intergenic -26983 NM_001163501 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak1_37_313_-0.467644234308382_8.06079863173744_3.28784458468807 chr1 119712323 119713073 + 3.28784458468807 NA intron (NM_019933, intron 13 of 26) intron (NM_019933, intron 13 of 26) -63698 NM_145506 226352 Mm.253156 NM_145506 ENSMUSG00000026383 Epb41l5 1700030C16Rik|AL022914|BE37|E230025E14Rik|Epb4.1l5|Lulu1|NBL5 erythrocyte membrane protein band 4.1 like 5 protein-coding common_peak2_129_1202_-0.228894095656823_10.1179738793477_3.28756339802995 chr2 34772015 34773692 + 3.28756339802995 NA intron (NM_001163434, intron 3 of 8) intron (NM_001163434, intron 3 of 8) 763 NM_022310 14828 Mm.330160 NM_022310 ENSMUSG00000026864 Hspa5 AL022860|AU019543|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|SEZ-7|Sez7|baffled|mBiP heat shock protein 5 protein-coding common_peak1_108_683_0.273889720643739_9.55479737520777_3.28753005003242 chr8 116732036 116733586 + 3.28753005003242 NA exon (NM_029441, exon 1 of 7) exon (NM_029441, exon 1 of 7) 180 NM_029441 75796 Mm.159575 NM_029441 ENSMUSG00000031758 Cdyl2 1700029M19Rik|4930453I21Rik|Gm20194 chromodomain protein, Y chromosome-like 2 protein-coding common_peak2_213_2127_-0.16969970495906_10.9704325830217_3.28654857496691 chr6 72438513 72440685 + 3.28654857496691 NA promoter-TSS (NM_145569) promoter-TSS (NM_145569) -41 NM_145569 232087 Mm.29815 NM_145569 ENSMUSG00000053907 Mat2a D630045P18Rik methionine adenosyltransferase II, alpha protein-coding common_peak1_30_114_0.621192153789932_7.15608612783934_3.28632013738104 chr12 101003869 101004420 + 3.28632013738104 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 17624 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak1_26_220_-0.565694992551837_7.50505506311551_3.28611305729407 chr4 132329036 132329564 + 3.28611305729407 NA intron (NM_027925, intron 1 of 8) intron (NM_027925, intron 1 of 8) 238 NM_027925 71787 Mm.239183 NM_027925 ENSMUSG00000028898 Trnau1ap 1110007F05Rik|AA387999|Secp43|Trspap1|WI1-2643G14.2 tRNA selenocysteine 1 associated protein 1 protein-coding common_peak1_26_220_-0.565694992551837_7.50505506311551_3.28611305729407-2 chr8 121201326 121201916 + 3.28611305729407 NA Intergenic ID4|SINE|ID 73936 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding unique_peak2_36_149_0.55096496071553_7.50430117085365_3.28611305729407 chr1 39608090 39609345 + 3.28611305729407 NA Intergenic Intergenic -31370 NM_001033135 67702 Mm.28614 NM_001033135 ENSMUSG00000048234 Rnf149 1600023E10Rik|AV037261|C76763|Gm15832|Greul4|OTTMUSG00000026591 ring finger protein 149 protein-coding common_peak2_36_149_0.55096496071553_7.50430117085365_3.28611305729407 chr18 60595601 60596647 + 3.28611305729407 NA exon (NM_177340, exon 3 of 3) exon (NM_177340, exon 3 of 3) -4408 NM_133363 170947 Mm.159257 NM_133363 ENSMUSG00000049173 Myoz3 4833419K08Rik|Fatz-3 myozenin 3 protein-coding common_peak1_20_172_-0.657153583838227_7.10605143571761_3.28532846234999 chr11 106166970 106167359 + 3.28532846234999 NA intron (NM_028126, intron 8 of 10) MER115|DNA|hAT-Tip100 -7022 NM_172397 67803 Mm.21687 NM_172397 ENSMUSG00000040699 Limd2 0610025L06Rik|AI413966 LIM domain containing 2 protein-coding unique_peak2_20_172_-0.657153583838227_7.10605143571761_3.28532846234999 chr4 134762143 134763385 + 3.28532846234999 NA intron (NM_145554, intron 1 of 8) intron (NM_145554, intron 1 of 8) 5240 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak1_20_172_-0.657153583838227_7.10605143571761_3.28532846234999-2 chr16 17015871 17016342 + 3.28532846234999 NA intron (NM_011949, intron 2 of 8) intron (NM_011949, intron 2 of 8) 32724 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak2_75_417_0.34622969368872_8.88047397892524_3.28508770694834 chr15 100442670 100444333 + 3.28508770694834 NA Intergenic (CGGGGG)n|Simple_repeat|Simple_repeat 20308 NR_040351 432982 Mm.234608 NM_001034883 ENSMUSG00000087444 Gm5475 EG432982 predicted gene 5475 ncRNA common_peak1_46_392_-0.415254414832589_8.41075829484231_3.28499164248521 chr5 130002152 130003168 + 3.28499164248521 NA exon (NM_010368, exon 1 of 12) exon (NM_010368, exon 1 of 12) 168 NM_010368 110006 Mm.3317 NM_010368 ENSMUSG00000025534 Gusb AI747421|Gur|Gus|Gus-r|Gus-s|Gus-t|Gus-u|Gut|asd|g glucuronidase, beta protein-coding common_peak1_147_1028_0.225981006690155_10.120017770239_3.284880578313 chr9 99139093 99140934 + 3.284880578313 NA 5' UTR (NM_029094, exon 1 of 24) 5' UTR (NM_029094, exon 1 of 24) 198 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak2_142_1339_-0.215826938762708_10.2801038159638_3.2848648730909 chrX 170008263 170009965 + 3.2848648730909 NA Intergenic Intergenic -30197 NR_029457 654820 Mm.34441 NM_001039559 ENSMUSG00000072844 G530011O06Rik - RIKEN cDNA G530011O06 gene ncRNA common_peak1_54_463_-0.376689976741657_8.66963600675674_3.28481947884629 chr3 41741744 41742567 + 3.28481947884629 NA promoter-TSS (NM_027271) promoter-TSS (NM_027271) 359 NM_001081411 67161 Mm.331001 NM_026008 ENSMUSG00000059834 Sclt1 2610207F23Rik|4931421F20Rik sodium channel and clathrin linker 1 protein-coding common_peak1_33_131_0.585754452802074_7.33727134575949_3.28469554626044 chr1 128607516 128608324 + 3.28469554626044 NA Intergenic Intergenic -15621 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak2_33_131_0.585754452802074_7.33727134575949_3.28469554626044 chr19 47530669 47531730 + 3.28469554626044 NA intron (NM_175360, intron 2 of 9) intron (NM_175360, intron 2 of 9) 5821 NM_175360 108689 Mm.218048 NM_175360 ENSMUSG00000042694 Obfc1 0610009H20Rik|2310057J23Rik|AAF-44|AAF44|AI413458|RPA-32 oligonucleotide/oligosaccharide-binding fold containing 1 protein-coding common_peak2_41_348_-0.442996271224798_8.22558509059725_3.28456529718159 chr3 116630213 116631437 + 3.28456529718159 NA TTS (NM_008246) TTS (NM_008246) -16238 NM_030016 229780 Mm.259648 NM_030016 ENSMUSG00000033439 Trmt13 4631408H19Rik|A330067P21|A930028L21Rik|Ccdc76 tRNA methyltransferase 13 protein-coding unique_peak2_12_109_-0.852550780070083_6.35508432348962_3.28442083541891-2 chr9 44154730 44155785 + 3.28442083541891 NA intron (NM_007619, intron 12 of 15) ID4|SINE|ID 20599 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding unique_peak2_12_109_-0.852550780070083_6.35508432348962_3.28442083541891 chr7 29818765 29819483 + 3.28442083541891 NA intron (NM_001145880, intron 1 of 4) intron (NM_001145880, intron 1 of 4) 3052 NM_001145880 233056 Mm.224766 NM_146185 ENSMUSG00000011427 Zfp790 6330581L23Rik zinc finger protein 790 protein-coding unique_peak2_52_251_0.438461841943195_8.19651084447151_3.28368437695482 chr12 17694205 17696075 + 3.28368437695482 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 4326 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_52_251_0.438461841943195_8.19651084447151_3.28368437695482 chr18 35853557 35855403 + 3.28368437695482 NA intron (NM_133687, intron 1 of 2) intron (NM_133687, intron 1 of 2) 24662 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_241_1961_0.165069829602565_11.0206442410205_3.28360553041154 chr10 19169545 19172059 + 3.28360553041154 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 3564 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_345_3724_-0.127201867557979_11.7994237764579_3.28358452615702 chr10 77604889 77611070 + 3.28358452615702 NA intron (NM_001301671, intron 1 of 3) intron (NM_001301671, intron 1 of 3) 1381 NM_001301671 20610 Mm.24433 NM_019929 ENSMUSG00000020265 Sumo3 2810014B19Rik|D10Ertd345e|SMT3A|SUMO-3|Smt3h1 small ubiquitin-like modifier 3 protein-coding common_peak1_51_245_0.439519050488048_8.16227403058326_3.28351967129664 chr5 104508216 104508847 + 3.28351967129664 NA 5' UTR (NM_001166581, exon 1 of 2) 5' UTR (NM_001166581, exon 1 of 2) 179 NM_001166581 100042165 Mm.482189 NM_001166581 ENSMUSG00000079065 BC005561 - cDNA sequence BC005561 protein-coding common_peak2_66_350_0.375216479845163_8.64293546022714_3.28349381061724 chr4 116463550 116464881 + 3.28349381061724 NA promoter-TSS (NM_008641) promoter-TSS (NM_008641) -34 NM_008641 17776 Mm.9287 NM_008641 ENSMUSG00000003810 Mast2 MAST205|Mtssk microtubule associated serine/threonine kinase 2 protein-coding common_peak2_65_343_0.377667504145139_8.61509850677467_3.2826704654064 chr13 113544463 113546873 + 3.2826704654064 NA Intergenic PB1D11|SINE|Alu -42824 NR_045501 70917 Mm.491036 NR_045501 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA unique_peak2_34_287_-0.488479286918778_7.92568535798292_3.28260317988703 chr1 180333995 180336033 + 3.28260317988703 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -4465 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_221_2219_-0.165813482686417_11.0334372198943_3.28209321403265 chr17 36121575 36123327 + 3.28209321403265 NA Intergenic MLT1E3|LTR|ERVL-MaLR -1007 NR_046286 15024 Mm.426031 NM_010395 ENSMUSG00000079491 H2-T10 H-2T10 histocompatibility 2, T region locus 10 protein-coding common_peak1_232_2347_-0.161105132236203_11.1166641269919_3.28163628310518 chr5 115010575 115012219 + 3.28163628310518 NA promoter-TSS (NM_029012) promoter-TSS (NM_029012) -127 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak1_17_148_-0.714483158589494_6.86192694116741_3.28160121242369 chr13 48516247 48516799 + 3.28160121242369 NA Intergenic MTA_Mm|LTR|ERVL-MaLR -3087 NM_001164576 67911 Mm.251375 NM_026450 ENSMUSG00000050954 Zfp169 1700025J14Rik|4930429A13Rik|BE688704 zinc finger protein 169 protein-coding common_peak1_17_148_-0.714483158589494_6.86192694116741_3.28160121242369-2 chr5 110230462 110230864 + 3.28160121242369 NA promoter-TSS (NM_001253814) promoter-TSS (NM_001253814) -341 NM_001253814 71782 Mm.288442 NM_027922 ENSMUSG00000029501 Ankle2 1110001J12Rik|AI661024|D5Ertd585e ankyrin repeat and LEM domain containing 2 protein-coding common_peak1_71_387_0.357997142058252_8.77891141321625_3.28101255385164 chr7 78737039 78738312 + 3.28101255385164 NA Intergenic L1ME1|LINE|L1 -19455 NR_015542 414121 Mm.482537 NR_015542 ENSMUSG00000059146 E430016F16Rik - RIKEN cDNA E430016F16 gene ncRNA common_peak2_105_954_-0.257002846293643_9.77085549977629_3.28093962178645 chr8 71468486 71470501 + 3.28093962178645 NA intron (NM_001294259, intron 1 of 3) CpG 299 NR_122114 66498 Mm.260360 NM_025600 ENSMUSG00000074247 Dda1 1500034J01Rik|1700095J19Rik|R74921 DET1 and DDB1 associated 1 protein-coding common_peak1_176_1303_0.200932766964032_10.4491945377131_3.28059623799218 chr9 111142864 111145552 + 3.28059623799218 NA intron (NM_001164838, intron 3 of 14) Lx8|LINE|L1 26097 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding common_peak2_124_821_0.25112619533302_9.80855768134819_3.28006131385408 chr17 64330991 64332057 + 3.28006131385408 NA intron (NM_144859, intron 1 of 8) CpG 359 NM_144859 224938 Mm.489681 NM_144859 ENSMUSG00000024083 Pja2 AI447901|AL022700|Neurodap1|mKIAA0438 praja 2, RING-H2 motif containing protein-coding common_peak1_229_2312_-0.162370848478007_11.0943641263972_3.27912357903605 chr15 99029293 99031174 + 3.27912357903605 NA 5' UTR (NM_009448, exon 1 of 4) 5' UTR (NM_009448, exon 1 of 4) 342 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding common_peak1_31_262_-0.516053414980778_7.78089228180191_3.27847883571233 chr1 138248227 138248809 + 3.27847883571233 NA Intergenic Intergenic -25220 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_72_395_0.352962406306018_8.80583782323262_3.27803371016561 chr5 107687651 107688809 + 3.27803371016561 NA Intergenic Intergenic 15250 NR_045871 654809 Mm.399159 NR_045871 ENSMUSG00000106333 4930428O21Rik - RIKEN cDNA 4930428O21 gene ncRNA common_peak1_111_1015_-0.248895314381528_9.8642370295814_3.27737863961338 chr12 101014720 101016126 + 3.27737863961338 NA intron (NM_026681, intron 3 of 29) B1_Mus2|SINE|Alu 6345 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak1_42_356_-0.434053093775148_8.26275371714152_3.27641579039357 chr5 115012277 115013081 + 3.27641579039357 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 1155 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak2_127_1180_-0.229703052712921_10.0909417230407_3.27578747819901 chr14 52102772 52104199 + 3.27578747819901 NA intron (NM_001170983, intron 1 of 8) intron (NM_001170983, intron 1 of 8) 543 NM_001170982 15381 Mm.427321 NM_016884 ENSMUSG00000060373 Hnrnpc AL022939|D14Wsu171e|Hnrpc|Hnrpc1|Hnrpc2|hnRNPC1|hnRNPC2|hnrnp-C heterogeneous nuclear ribonucleoprotein C protein-coding common_peak1_142_983_0.229675841243187_10.0573524259608_3.27547827191323 chr7 126883691 126885329 + 3.27547827191323 NA 5' UTR (NM_001163774, exon 1 of 19) 5' UTR (NM_001163774, exon 1 of 19) 457 NM_001163775 381921 Mm.259634 NM_001163774 ENSMUSG00000059981 Taok2 1110033K02Rik|B230344N16|MAP3K17|PSK|PSK1|TAO1|TAO2|mKIAA0881 TAO kinase 2 protein-coding common_peak1_232_1867_0.168832821164187_10.9516951502918_3.27443406588272 chr8 95331167 95332737 + 3.27443406588272 NA promoter-TSS (NM_133954) promoter-TSS (NM_133954) -2 NM_024467 79233 Mm.350514 NM_024467 ENSMUSG00000046556 Zfp319 AI225750|AI413472|Znf319|mKIAA1388 zinc finger protein 319 protein-coding common_peak1_24_204_-0.593464907369063_7.38274764582092_3.27424242028367-3 chr8 123030403 123030902 + 3.27424242028367 NA intron (NR_037865, intron 1 of 13) intron (NR_037865, intron 1 of 13) 11632 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_24_204_-0.593464907369063_7.38274764582092_3.27424242028367 chr14 62836855 62837301 + 3.27424242028367 NA promoter-TSS (NM_175546) promoter-TSS (NM_175546) -612 NM_175546 268752 Mm.1960 NM_175546 ENSMUSG00000014547 Wdfy2 5830485M08|B130024L21Rik|ProF|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding common_peak1_24_204_-0.593464907369063_7.38274764582092_3.27424242028367-2 chr3 20223691 20224187 + 3.27424242028367 NA intron (NM_007753, intron 7 of 10) intron (NM_007753, intron 7 of 10) -1580 NR_105974 102465609 NR_105974 ENSMUSG00000099105 Mir7007 Gm27897|mmu-mir-7007 microRNA 7007 ncRNA common_peak2_24_204_-0.593464907369063_7.38274764582092_3.27424242028367 chr9 114933089 114934235 + 3.27424242028367 NA intron (NM_175380, intron 1 of 7) CpG 325 NM_175380 333433 Mm.38198 NM_175380 ENSMUSG00000050627 Gpd1l 2210409H23Rik|D9Ertd660e glycerol-3-phosphate dehydrogenase 1-like protein-coding common_peak1_22_188_-0.623781620127563_7.25035161415729_3.27288202843345-3 chr7 142352588 142353111 + 3.27288202843345 NA intron (NM_177265, intron 2 of 3) intron (NM_177265, intron 2 of 3) 19410 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_22_188_-0.623781620127563_7.25035161415729_3.27288202843345 chr11 32565288 32565824 + 3.27288202843345 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 32290 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_22_188_-0.623781620127563_7.25035161415729_3.27288202843345-2 chr14 47297812 47298245 + 3.27288202843345 NA promoter-TSS (NM_178684) promoter-TSS (NM_178684) -286 NM_178684 218975 Mm.212297 NM_178684 ENSMUSG00000021840 Mapk1ip1l 9130202B12|C130032J12Rik mitogen-activated protein kinase 1 interacting protein 1-like protein-coding common_peak1_89_527_0.308396829392533_9.19859253405472_3.27236741434767 chr2 151541877 151543333 + 3.27236741434767 NA non-coding (NR_126058, exon 1 of 4) non-coding (NR_126058, exon 1 of 4) 122 NM_001302078 14225 Mm.278458 NM_008019 ENSMUSG00000032966 Fkbp1a FKBP12|Fkbp|Fkbp1 FK506 binding protein 1a protein-coding common_peak2_57_490_-0.364303588615767_8.75742742000681_3.27083815369961 chr19 6974302 6976131 + 3.27083815369961 NA 5' UTR (NM_008889, exon 1 of 4) 5' UTR (NM_008889, exon 1 of 4) 168 NM_008889 18938 Mm.140 NM_008889 ENSMUSG00000056612 Ppp1r14b AOM172|PHI-1|PLCB3N|Png protein phosphatase 1, regulatory (inhibitor) subunit 14B protein-coding common_peak2_140_1317_-0.216869051428748_10.2557001292937_3.27076298141896 chr8 121584630 121586200 + 3.27076298141896 NA Intergenic CpG -5053 NM_026160 67443 Mm.28357 NM_026160 ENSMUSG00000031812 Map1lc3b 1010001C15Rik|Atg8|LC3b|Map1lc3 microtubule-associated protein 1 light chain 3 beta protein-coding common_peak1_48_409_-0.402603862594761_8.47817816820806_3.27048275640117 chr11 70197556 70198374 + 3.27048275640117 NA Intergenic B1_Mur1|SINE|Alu -15945 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak2_156_1489_-0.203620980943874_10.4392861248776_3.27041322836274 chr1 74386172 74388099 + 3.27041322836274 NA Intergenic Intergenic -4474 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding common_peak2_131_1222_-0.225664118493796_10.1433766292805_3.26977789812217 chr14 8079986 8081355 + 3.26977789812217 NA intron (NM_025938, intron 1 of 5) intron (NM_025938, intron 1 of 5) 357 NM_025938 67053 Mm.210048 NM_025938 ENSMUSG00000023156 Rpp14 2610511E03Rik|AA682089 ribonuclease P 14 subunit protein-coding common_peak2_199_1966_-0.175929116583077_10.853816683987_3.26834555909052 chr16 55634996 55638369 + 3.26834555909052 NA Intergenic Intergenic 141951 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA unique_peak2_10_94_-0.936670176823352_6.10152051991927_3.26766896473391 chr14 27374839 27375336 + 3.26766896473391 NA intron (NM_001289688, intron 2 of 9) intron (NM_001289688, intron 2 of 9) 13698 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_10_94_-0.936670176823352_6.10152051991927_3.26766896473391-3 chr7 46389189 46389780 + 3.26766896473391 NA Intergenic MTEa|LTR|ERVL-MaLR -6984 NM_008421 16502 Mm.249386 NM_008421 ENSMUSG00000058975 Kcnc1 C230009H10Rik|KShIIIB|KV4|Kcr2-1|Kv3.1|NGK2|Shaw potassium voltage gated channel, Shaw-related subfamily, member 1 protein-coding unique_peak2_10_94_-0.936670176823352_6.10152051991927_3.26766896473391-2 chr2 146457325 146458135 + 3.26766896473391 NA intron (NM_001033348, intron 4 of 40) intron (NM_001033348, intron 4 of 40) 54274 NM_001033348 241694 Mm.222310 NM_001033348 ENSMUSG00000037110 Ralgapa2 A230067G21Rik|AS250|BC053994|RGC2|pp250 Ral GTPase activating protein, alpha subunit 2 (catalytic) protein-coding unique_peak2_10_94_-0.936670176823352_6.10152051991927_3.26766896473391-4 chr7 65681725 65682452 + 3.26766896473391 NA intron (NM_172310, intron 12 of 18) L1MDa|LINE|L1 -11329 NM_178056 68634 Mm.476828 NM_026795 ENSMUSG00000078681 Tm2d3 1110025I09Rik|5930422O05Rik|Blp2 TM2 domain containing 3 protein-coding unique_peak1_14_35_1.01211911996904_5.67598456142683_3.26745427583628 chr11 95340457 95340882 + 3.26745427583628 NA intron (NM_172543, intron 1 of 7) intron (NM_172543, intron 1 of 7) 3651 NM_172543 215512 Mm.262113 NM_172543 ENSMUSG00000038893 Fam117a 5730593F17Rik|AW548096 family with sequence similarity 117, member A protein-coding unique_peak1_14_35_1.01211911996904_5.67598456142683_3.26745427583628-2 chr2 18958254 18958647 + 3.26745427583628 NA intron (NM_008845, intron 1 of 9) intron (NM_008845, intron 1 of 9) 39671 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding common_peak1_14_35_1.01211911996904_5.67598456142683_3.26745427583628 chr9 87022911 87023282 + 3.26745427583628 NA intron (NM_024195, intron 1 of 15) intron (NM_024195, intron 1 of 15) 1067 NM_024195 266690 Mm.30166 NM_024195 ENSMUSG00000032872 Cyb5r4 2810034J18Rik|B5+B5R|C79736|Cb5cb5r|Ncb5or|b5/b5r|b5b5r cytochrome b5 reductase 4 protein-coding common_peak2_109_994_-0.25064938585874_9.83322802250164_3.26694188401065 chr14 103649401 103652049 + 3.26694188401065 NA exon (NM_198014, exon 1 of 7) exon (NM_198014, exon 1 of 7) 482 NM_198014 105439 Mm.27548 NM_198014 ENSMUSG00000055717 Slain1 9630044O09Rik|AA675320|AW742596 SLAIN motif family, member 1 protein-coding unique_peak2_19_163_-0.666417776987307_7.02434311612443_3.26530716089705 chr11 48853172 48854481 + 3.26530716089705 NA Intergenic Intergenic 17520 NM_008326 15944 Mm.29938 NM_008326 ENSMUSG00000046879 Irgm1 Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47 immunity-related GTPase family M member 1 protein-coding unique_peak2_28_103_0.648223596371476_7.02455151632683_3.26530716089705 chr12 12301386 12302292 + 3.26530716089705 NA intron (NM_029758, intron 2 of 12) intron (NM_029758, intron 2 of 12) 39700 NM_001146119 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding common_peak1_19_163_-0.666417776987307_7.02434311612443_3.26530716089705 chr5 64813698 64814228 + 3.26530716089705 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 10440 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_28_103_0.648223596371476_7.02455151632683_3.26530716089705 chr8 72347885 72348505 + 3.26530716089705 NA intron (NM_007944, intron 22 of 23) intron (NM_007944, intron 22 of 23) 29133 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak2_28_103_0.648223596371476_7.02455151632683_3.26530716089705 chr6 119195902 119196777 + 3.26530716089705 NA promoter-TSS (NM_009781) promoter-TSS (NM_009781) 70 NM_001255997 12288 Mm.41628 NM_009781 ENSMUSG00000051331 Cacna1c Cav1.2|Cchl1a1|D930026N18Rik|MBC|MELC-CC calcium channel, voltage-dependent, L type, alpha 1C subunit protein-coding common_peak2_28_103_0.648223596371476_7.02455151632683_3.26530716089705-2 chr7 29859826 29860475 + 3.26530716089705 NA intron (NM_172740, intron 1 of 3) CpG 171 NM_172740 233058 Mm.297657 NM_172740 ENSMUSG00000058402 Zfp420 B230119D13|B230312I18Rik|mszf59-1|mszf70 zinc finger protein 420 protein-coding common_peak1_145_1011_0.225937762877676_10.0959624561331_3.26492295767867 chr7 39551920 39553326 + 3.26492295767867 NA Intergenic CpG 34857 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak2_46_212_0.468421467200179_7.96892035382593_3.26489964575449-2 chr8 71667403 71668987 + 3.26489964575449 NA intron (NM_001029873, intron 1 of 41) intron (NM_001029873, intron 1 of 41) 3562 NM_001029873 382018 Mm.334606 NM_001029873 ENSMUSG00000034799 Unc13a 2410078G03Rik|Munc13-1 unc-13 homolog A (C. elegans) protein-coding common_peak2_46_212_0.468421467200179_7.96892035382593_3.26489964575449 chr15 38446598 38448052 + 3.26489964575449 NA Intergenic Intergenic 43222 NR_105916 102465574 NR_105916 ENSMUSG00000099110 Mir6951 Gm27765|mmu-mir-6951 microRNA 6951 ncRNA common_peak2_111_709_0.268114157998593_9.60573229339134_3.2648770474435 chr9 20459071 20460814 + 3.2648770474435 NA intron (NM_011753, intron 1 of 9) CpG 218 NM_011753 22688 Mm.107441 NM_011753 ENSMUSG00000063108 Zfp26 5033428C05Rik|KRAB15|Zfp-26|Zfp70|Zfp81-rs1|mKIAA4196|mkr-3|mszf14|mszf52 zinc finger protein 26 protein-coding common_peak1_81_716_-0.297773732450121_9.33694244247684_3.26319851624147 chr9 107533957 107535098 + 3.26319851624147 NA exon (NM_019704, exon 1 of 2) exon (NM_019704, exon 1 of 2) 582 NM_019704 56395 Mm.260153 NM_019704 ENSMUSG00000010045 Tmem115 C78915|Pl6|Pp6 transmembrane protein 115 protein-coding common_peak2_102_924_-0.261761671626935_9.72242871959021_3.26312183484404 chr15 98661896 98663412 + 3.26312183484404 NA intron (NM_001080981, intron 1 of 16) intron (NM_001080981, intron 1 of 16) 235 NM_001080981 74351 Mm.45725 NM_001080981 ENSMUSG00000003360 Ddx23 3110082M05Rik|4921506D17Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 protein-coding common_peak1_166_1598_-0.196207617792373_10.5448504145841_3.26269011221442 chr7 126474284 126476063 + 3.26269011221442 NA promoter-TSS (NM_011363) promoter-TSS (NM_011363) -43 NM_011363 20399 Mm.8538 NM_011363 ENSMUSG00000030733 Sh2b1 AI425885|C530001K22Rik|Irip|Psm|SH2-B|SH2-Bb|Sh2bpsm1|mKIAA1299 SH2B adaptor protein 1 protein-coding unique_peak2_41_180_0.504241067901649_7.75196642103403_3.26261375948722 chr2 127443948 127445035 + 3.26261375948722 NA promoter-TSS (NM_029629) promoter-TSS (NM_029629) 74 NM_029629 68126 Mm.288676 NM_029629 ENSMUSG00000027371 Fahd2a 1500003K14Rik|B430104H02Rik|Cgi-105|Fahd2 fumarylacetoacetate hydrolase domain containing 2A protein-coding common_peak2_147_1391_-0.209935222264605_10.3379758847164_3.26231954233009 chr1 167000345 167005480 + 3.26231954233009 NA intron (NM_175461, intron 1 of 2) intron (NM_175461, intron 1 of 2) 1495 NM_001160261 226610 Mm.389217 NM_175461 ENSMUSG00000060568 Fam78b C030014K22Rik|C030020L09Rik family with sequence similarity 78, member B protein-coding common_peak1_330_2940_0.135301175775005_11.5897416567746_3.26193969853297 chr2 128966663 128968498 + 3.26193969853297 NA 5' UTR (NM_178404, exon 1 of 12) 5' UTR (NM_178404, exon 1 of 12) 178 NM_178404 78751 Mm.26377 NM_178404 ENSMUSG00000042851 Zc3h6 4631426G04Rik|4833425H18Rik|AU024389|AW060453|Zc3hdc6|mKIAA2035 zinc finger CCCH type containing 6 protein-coding common_peak2_187_1411_0.192831336527551_10.559940041535_3.26140988950315 chr2 32079813 32084119 + 3.26140988950315 NA intron (NM_175511, intron 1 of 1) intron (NM_175511, intron 1 of 1) 1739 NM_175511 241303 Mm.250441 NM_175511 ENSMUSG00000050592 Fam78a A130092J06Rik family with sequence similarity 78, member A protein-coding common_peak1_58_500_-0.363140388153383_8.78709659911852_3.26081913097883 chrX 7670596 7671728 + 3.26081913097883 NA exon (NM_019755, exon 1 of 5) exon (NM_019755, exon 1 of 5) 228 NM_019755 18824 Mm.18565 NM_019755 ENSMUSG00000031146 Plp2 mIMA4 proteolipid protein 2 protein-coding common_peak1_49_418_-0.398178930376611_8.51171696851105_3.26054538896939-2 chr8 33607569 33608389 + 3.26054538896939 NA intron (NM_017374, intron 1 of 6) B3|SINE|B2 8358 NM_017374 19053 Mm.29301 NM_017374 ENSMUSG00000009630 Ppp2cb AI115466|D8Ertd766e|PP2Ac protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform protein-coding common_peak2_49_418_-0.398178930376611_8.51171696851105_3.26054538896939 chr10 8064964 8066606 + 3.26054538896939 NA Intergenic Intergenic -109662 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_49_418_-0.398178930376611_8.51171696851105_3.26054538896939 chr8 4252902 4253508 + 3.26054538896939 NA exon (NM_133968, exon 1 of 5) exon (NM_133968, exon 1 of 5) 103 NM_133968 102209 Mm.28452 NM_133968 ENSMUSG00000011837 Snapc2 0610007H10Rik|AU015675 small nuclear RNA activating complex, polypeptide 2 protein-coding unique_peak2_29_245_-0.533858072741537_7.67558546896847_3.26052536431499 chr8 88691195 88692674 + 3.26052536431499 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -5094 NM_001128170 74256 Mm.490395 NM_173369 ENSMUSG00000036712 Cyld 2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849 CYLD lysine 63 deubiquitinase protein-coding common_peak2_29_245_-0.533858072741537_7.67558546896847_3.26052536431499 chr5 31575787 31576704 + 3.26052536431499 NA Intergenic Intergenic -4848 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA common_peak1_47_218_0.465600719677278_8.00758741943981_3.26050142970194 chr3 96635151 96636109 + 3.26050142970194 NA promoter-TSS (NM_001162388) promoter-TSS (NM_001162388) 200 NM_001162387 18632 Mm.20901 NM_011069 ENSMUSG00000028102 Pex11b PEX11beta|Pex11pbeta peroxisomal biogenesis factor 11 beta protein-coding common_peak1_96_584_0.293045548892643_9.33881558891709_3.25862885533403 chr2 166233654 166235136 + 3.25862885533403 NA Intergenic ORR1E|LTR|ERVL-MaLR -39513 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 OTTMUSG00000001131 predicted gene 11468 ncRNA common_peak1_96_584_0.293045548892643_9.33881558891709_3.25862885533403-2 chr8 116627246 116628817 + 3.25862885533403 NA intron (NM_029441, intron 1 of 6) intron (NM_029441, intron 1 of 6) 104960 NM_029441 75796 Mm.159575 NM_029441 ENSMUSG00000031758 Cdyl2 1700029M19Rik|4930453I21Rik|Gm20194 chromodomain protein, Y chromosome-like 2 protein-coding common_peak2_59_509_-0.359084693074799_8.81481109032146_3.25824059412642 chr1 170852627 170854741 + 3.25824059412642 NA intron (NM_001081304, intron 2 of 15) intron (NM_001081304, intron 2 of 15) 14087 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding common_peak1_264_2207_0.155322895543266_11.1861859045498_3.25783024029429 chr13 51791961 51793887 + 3.25783024029429 NA intron (NM_001281880, intron 1 of 16) CpG 823 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_26_92_0.683048755731564_6.88068318897381_3.25638579936007 chr10 79416683 79417210 + 3.25638579936007 NA Intergenic IAPLTR3-int|LTR|ERVK -52012 NM_001104537 625029 Mm.469865 NM_001104537 ENSMUSG00000091381 Vmn2r83 EG625029 vomeronasal 2, receptor 83 protein-coding common_peak1_26_92_0.683048755731564_6.88068318897381_3.25638579936007-2 chr2 166900419 166901020 + 3.25638579936007 NA Intergenic B2_Mm2|SINE|B2 -5377 NM_023565 110750 Mm.22417 NM_023565 ENSMUSG00000002718 Cse1l 2610100P18Rik|AA407533|Capts|Cas|Xpo2 chromosome segregation 1-like (S. cerevisiae) protein-coding unique_peak2_26_92_0.683048755731564_6.88068318897381_3.25638579936007 chr14 25546472 25547423 + 3.25638579936007 NA intron (NM_001310666, intron 3 of 23) intron (NM_001310666, intron 3 of 23) 12508 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak2_26_92_0.683048755731564_6.88068318897381_3.25638579936007-3 chr8 72209403 72210349 + 3.25638579936007 NA intron (NM_001080812, intron 2 of 4) intron (NM_001080812, intron 2 of 4) 2961 NM_001080812 234421 Mm.211247 NM_001080812 ENSMUSG00000074240 Cib3 C730014M21Rik|Gm1107|KIP3 calcium and integrin binding family member 3 protein-coding unique_peak2_26_92_0.683048755731564_6.88068318897381_3.25638579936007-2 chr7 75668939 75669793 + 3.25638579936007 NA intron (NM_029332, intron 10 of 36) intron (NM_029332, intron 10 of 36) -178972 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_26_92_0.683048755731564_6.88068318897381_3.25638579936007-3 chr5 149016076 149016716 + 3.25638579936007 NA Intergenic Intergenic 9434 NR_040429 100503307 Mm.188008 NR_040429 ENSMUSG00000086610 Gm15408 OTTMUSG00000021225 predicted gene 15408 ncRNA common_peak2_165_1586_-0.195968232480478_10.5341022965949_3.25615297310681 chr12 85373430 85375507 + 3.25615297310681 NA exon (NM_026775, exon 1 of 5) exon (NM_026775, exon 1 of 5) 249 NM_026775 68581 Mm.379159 NM_026775 ENSMUSG00000021248 Tmed10 1110014C03Rik|Tmp21|p23|p24delta1 transmembrane p24 trafficking protein 10 protein-coding common_peak1_92_824_-0.277433588245588_9.54953351501038_3.25594672654321 chr11 83270932 83272063 + 3.25594672654321 NA Intergenic Intergenic 15229 NM_001166028 237890 Mm.297670 NM_001166028 ENSMUSG00000082101 Slfn14 Gm20|Slfn14-ps schlafen 14 protein-coding common_peak1_245_2499_-0.155522287144382_11.2099512359773_3.25553516256926 chr18 46524233 46525978 + 3.25553516256926 NA intron (NM_173423, intron 1 of 2) intron (NM_173423, intron 1 of 2) 866 NM_173423 240263 Mm.38249 NM_173423 ENSMUSG00000033319 Fem1c 2610312A07Rik|3632443A22Rik|AI646567 fem-1 homolog c (C.elegans) protein-coding common_peak1_32_270_-0.504829093692991_7.82973449450738_3.25532085937423-2 chr6 130340577 130341544 + 3.25532085937423 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -3434 NM_001289604 16634 Mm.425338 NM_010648 ENSMUSG00000067591 Klra3 5E6|Ly49c|NK-2.1|Nk-2|Nk2|Nk2.1 killer cell lectin-like receptor, subfamily A, member 3 protein-coding common_peak1_32_270_-0.504829093692991_7.82973449450738_3.25532085937423 chr5 34537983 34538686 + 3.25532085937423 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) -5031 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak2_119_1097_-0.238781284034783_9.98127169698781_3.25488070419277 chr9 110475738 110477648 + 3.25488070419277 NA promoter-TSS (NM_010628) promoter-TSS (NM_010628) 1 NM_177771 270201 Mm.41744 NM_177771 ENSMUSG00000054792 Klhl18 A930041K15|AW545966 kelch-like 18 protein-coding common_peak1_457_4456_0.110222960331875_12.1769687257786_3.25480988559864 chr17 88063145 88066928 + 3.25480988559864 NA exon (NM_001081034, exon 1 of 23) exon (NM_001081034, exon 1 of 23) 249 NM_001081034 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding common_peak1_275_2857_-0.144970258476311_11.4083050718577_3.25437751016802 chr4 63408027 63410734 + 3.25437751016802 NA Intergenic Intergenic -5935 NM_001045514 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak2_44_373_-0.420715822323006_8.33653654872613_3.25412172934207 chr2 30392184 30393600 + 3.25412172934207 NA intron (NM_001290509, intron 1 of 6) intron (NM_001290509, intron 1 of 6) 638 NM_001290508 57170 Mm.285167 NM_020329 ENSMUSG00000026856 Dolpp1 0610011H20Rik|AB030189|LSFR2 dolichyl pyrophosphate phosphatase 1 protein-coding common_peak1_44_373_-0.420715822323006_8.33653654872613_3.25412172934207 chr15 79689876 79690604 + 3.25412172934207 NA promoter-TSS (NM_013818) promoter-TSS (NM_013818) -656 NM_013818 14904 Mm.19080 NM_013818 ENSMUSG00000042535 Gtpbp1 AL022987|AW045683|C85212|GP-1|Gtpbp GTP binding protein 1 protein-coding common_peak2_56_279_0.415215702605206_8.33689086824757_3.25412172934197 chr7 143599304 143600177 + 3.25412172934197 NA intron (NM_013742, intron 1 of 22) intron (NM_013742, intron 1 of 22) 350 NM_001252593 27267 Mm.125659 NM_013742 ENSMUSG00000010755 Cars CA3 cysteinyl-tRNA synthetase protein-coding common_peak1_62_536_-0.34716911803363_8.8951937189686_3.25378972566368 chr13 104285590 104286406 + 3.25378972566368 NA Intergenic Intergenic -1875 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak1_113_1035_-0.245697256950024_9.89395965921154_3.25302857285227-2 chr5 144255207 144256388 + 3.25302857285227 NA intron (NM_018772, intron 1 of 2) CpG 572 NM_018772 55950 Mm.38011 NM_018772 ENSMUSG00000047843 Bri3 I3 brain protein I3 protein-coding common_peak1_113_1035_-0.245697256950024_9.89395965921154_3.25302857285227 chr11 106562619 106564383 + 3.25302857285227 NA intron (NM_198292, intron 2 of 11) B3|SINE|B2 49429 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding common_peak1_133_1242_-0.222454569716405_10.1683832961943_3.25278374639957 chr9 123850702 123851933 + 3.25278374639957 NA TTS (NM_011798) TTS (NM_011798) 344 NM_148925 17281 Mm.252941 NM_148925 ENSMUSG00000025241 Fyco1 2810409M01Rik|Mem2|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding common_peak1_39_330_-0.452940867990085_8.14421697281217_3.25257777281852 chr5 36582131 36582689 + 3.25257777281852 NA promoter-TSS (NM_133910) promoter-TSS (NM_133910) -13 NM_133910 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding common_peak2_227_1816_0.170380637688771_10.9125330230785_3.25210596609465 chr7 132791527 132796407 + 3.25210596609465 NA intron (NM_212473, intron 1 of 4) B4|SINE|B4 -7032 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_42_186_0.498832710366314_7.79631081507079_3.25174116371864 chr1 172602015 172602929 + 3.25174116371864 NA promoter-TSS (NM_001164725) promoter-TSS (NM_001164725) 79 NM_001164725 677296 Mm.439612 NM_001164725 ENSMUSG00000070504 Fcrl6 ENSMUSG00000070504|FcRH6|mIFGP6|moFcRH6 Fc receptor-like 6 protein-coding common_peak2_76_668_-0.309140859868394_9.23129197070726_3.25171537940373 chr9 83833679 83835178 + 3.25171537940373 NA promoter-TSS (NM_001284272) promoter-TSS (NM_001284272) -261 NM_009445 22137 Mm.1904 NM_009445 ENSMUSG00000038379 Ttk AL022661|Esk1|Mps1|PYT|esk Ttk protein kinase protein-coding common_peak2_139_956_0.232295222410221_10.0185227256911_3.25076309609166 chr4 149425649 149427233 + 3.25076309609166 NA 5' UTR (NM_022022, exon 1 of 27) 5' UTR (NM_022022, exon 1 of 27) 190 NM_022022 63958 Mm.415260 NM_022022 ENSMUSG00000028960 Ube4b 4930551I19Rik|4933406G05Rik|AU014668|D4Bwg0973e|UFD2|UFD2a|Ufd2p|mKIAA0684 ubiquitination factor E4B protein-coding common_peak1_16_140_-0.736015091424622_6.77154380668648_3.25024612567138 chr1 46864478 46864945 + 3.25024612567138 NA Intergenic Intergenic -11202 NM_172653 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding common_peak1_16_140_-0.736015091424622_6.77154380668648_3.25024612567138-3 chr5 64491035 64491402 + 3.25024612567138 NA Intergenic Intergenic 14210 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA common_peak1_16_140_-0.736015091424622_6.77154380668648_3.25024612567138-2 chr2 112261725 112262175 + 3.25024612567138 NA promoter-TSS (NM_025403) promoter-TSS (NM_025403) 24 NM_025403 66181 Mm.272346 NM_025403 ENSMUSG00000027133 Nop10 1110036B12Rik|NOP10P|Nola3 NOP10 ribonucleoprotein protein-coding common_peak2_272_2820_-0.14551139171224_11.3892352547295_3.25013807181203 chr13 21179004 21181727 + 3.25013807181203 NA 5' UTR (NM_009054, exon 1 of 8) 5' UTR (NM_009054, exon 1 of 8) 434 NM_009054 19720 Mm.314056 NM_009054 ENSMUSG00000021326 Trim27 AW538890|Gm19403|Rfp tripartite motif-containing 27 protein-coding common_peak1_27_228_-0.552639038079018_7.56288426905743_3.24994063290047 chr11 9531752 9532340 + 3.24994063290047 NA intron (NM_178259, intron 45 of 61) intron (NM_178259, intron 45 of 61) 340104 NM_178259 268379 Mm.39270 NM_178259 ENSMUSG00000004668 Abca13 9830132L24|A930002G16Rik|AI956815 ATP-binding cassette, sub-family A (ABC1), member 13 protein-coding common_peak1_27_228_-0.552639038079018_7.56288426905743_3.24994063290047-2 chr5 31575972 31576708 + 3.24994063290047 NA Intergenic Intergenic -4943 NR_102275 100740 Mm.23370 NR_102275 AI839979 - expressed sequence AI839979 ncRNA unique_peak1_20_62_0.800194720298581_6.37737728364921_3.24877649806688 chr9 20868605 20869041 + 3.24877649806688 NA 5' UTR (NM_175687, exon 1 of 8) 5' UTR (NM_175687, exon 1 of 8) 181 NM_175687 319278 Mm.249932 NM_175687 ENSMUSG00000038884 A230050P20Rik RyDEN RIKEN cDNA A230050P20 gene protein-coding common_peak1_20_62_0.800194720298581_6.37737728364921_3.24877649806688-3 chr15 80977816 80978301 + 3.24877649806688 NA intron (NM_134091, intron 1 of 21) CpG 293 NM_134091 105835 Mm.274943 NM_134091 ENSMUSG00000042303 Sgsm3 1810012I01Rik|AI428557|BB175482|Cip85|R75178|RUSC3|Rutbc3 small G protein signaling modulator 3 protein-coding common_peak1_20_62_0.800194720298581_6.37737728364921_3.24877649806688-2 chr14 27317335 27317803 + 3.24877649806688 NA intron (NM_001289686, intron 4 of 12) intron (NM_001289686, intron 4 of 12) -18468 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_20_62_0.800194720298581_6.37737728364921_3.24877649806688 chr11 53838454 53838978 + 3.24877649806688 NA intron (NR_033332, intron 2 of 3) intron (NR_033332, intron 2 of 3) 20540 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA common_peak1_120_787_0.254515025179073_9.74930933204591_3.24826227865903 chr19 8018824 8020748 + 3.24826227865903 NA Intergenic IAPLTR3-int|LTR|ERVK -53759 NM_134256 171405 Mm.326517 NM_134256 ENSMUSG00000067656 Slc22a27 Oat9|mOAT6-L|mOAT6-S solute carrier family 22, member 27 protein-coding common_peak2_74_649_-0.314146199626149_9.18722280810274_3.24821552348638 chr14 55096454 55098846 + 3.24821552348638 NA 3' UTR (NM_153083, exon 2 of 2) 3' UTR (NM_153083, exon 2 of 2) 2866 NM_153083 105663 Mm.319204 NM_153083 ENSMUSG00000045691 Thtpa AW122966 thiamine triphosphatase protein-coding common_peak2_71_620_-0.320539473975103_9.11817972123293_3.24811347157952 chr19 42778999 42780567 + 3.24811347157952 NA intron (NM_019424, intron 1 of 19) CpG 193 NM_019424 192236 Mm.218381 NM_019424 ENSMUSG00000025188 Hps1 6030422N11Rik|BB405864|Gm21361|Hps|ep Hermansky-Pudlak syndrome 1 protein-coding common_peak1_38_161_0.533093446723236_7.60639672624624_3.24750218558607 chr7 100853828 100854604 + 3.24750218558607 NA intron (NM_177073, intron 1 of 10) intron (NM_177073, intron 1 of 10) 9197 NM_177073 320100 Mm.40336 NM_177073 ENSMUSG00000008318 Relt E430021K24Rik|Tnfrsf19l RELT tumor necrosis factor receptor protein-coding common_peak2_141_1327_-0.215267574313552_10.2674056441901_3.24668201274327-2 chr16 32276550 32278840 + 3.24668201274327 NA 5' UTR (NM_027355, exon 1 of 6) 5' UTR (NM_027355, exon 1 of 6) 234 NM_027355 70238 Mm.228263 NM_027355 ENSMUSG00000014074 Rnf168 3110001H15Rik ring finger protein 168 protein-coding common_peak2_141_1327_-0.215267574313552_10.2674056441901_3.24668201274327 chr13 55726781 55728335 + 3.24668201274327 NA intron (NM_028281, intron 1 of 3) PB1D9|SINE|Alu 190 NM_028281 72562 Mm.28145 NM_028281 ENSMUSG00000021496 Pcbd2 2700061N24Rik|Dcoh2|Dcohm pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 protein-coding common_peak1_21_179_-0.632055353635724_7.17582541951181_3.24520329870372 chr13 34667568 34668159 + 3.24520329870372 NA Intergenic Intergenic 14940 NR_105041 101056149 Mm.421309 NR_105041 ENSMUSG00000086786 Gm15908 OTTMUSG00000027716 predicted gene 15908 ncRNA common_peak1_21_179_-0.632055353635724_7.17582541951181_3.24520329870372-2 chr2 166669011 166669596 + 3.24520329870372 NA intron (NM_177782, intron 1 of 39) intron (NM_177782, intron 1 of 39) -3415 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak2_160_1531_-0.199203668565978_10.481598747642_3.2448068331694 chr7 45153476 45155184 + 3.2448068331694 NA promoter-TSS (NM_001278207) promoter-TSS (NM_001278207) 27 NM_001278207 68845 Mm.181689 NM_029406 ENSMUSG00000003423 Pih1d1 1110061L23Rik|4933413A04Rik|Nop17 PIH1 domain containing 1 protein-coding common_peak2_158_1132_0.213944135775883_10.2529042137085_3.24438118568162 chr19 11765715 11768960 + 3.24438118568162 NA Intergenic B1_Mus1|SINE|Alu -3078 NM_025606 94063 Mm.203928 NM_025606 ENSMUSG00000024683 Mrpl16 2310039D06Rik mitochondrial ribosomal protein L16 protein-coding common_peak1_52_444_-0.381919760410648_8.60670164564844_3.24417801419912 chr1 192061748 192062850 + 3.24417801419912 NA intron (NM_011633, intron 4 of 9) B1_Mur4|SINE|Alu 30300 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak2_700_7647_0.0844353510528766_12.9430844835072_3.24311045259763 chr11 117776181 117784016 + 3.24311045259763 NA intron (NM_181321, intron 1 of 7) CpG 523 NM_181321 217353 Mm.286963 NM_145439 ENSMUSG00000025572 Tmc6 D11Ertd204e|EVER1 transmembrane channel-like gene family 6 protein-coding common_peak1_167_1608_-0.194637033365879_10.5546300940405_3.24300781598634 chr11 119085142 119086914 + 3.24300781598634 NA 5' UTR (NM_007625, exon 1 of 5) 5' UTR (NM_007625, exon 1 of 5) 209 NM_007625 12418 Mm.268070 NM_007625 ENSMUSG00000039989 Cbx4 MPc2|PC2 chromobox 4 protein-coding common_peak2_127_1179_-0.228480947564968_10.0903306704667_3.24280902821709 chr9 105130879 105132880 + 3.24280902821709 NA promoter-TSS (NM_029385) promoter-TSS (NM_029385) -74 NM_029385 75686 Mm.305810 NM_029385 ENSMUSG00000032565 Nudt16 2310041H06Rik|2810047L04Rik|2900006H04Rik|AI851783 nudix (nucleoside diphosphate linked moiety X)-type motif 16 protein-coding common_peak1_40_338_-0.443698198070918_8.18329236410088_3.24255413875664 chr8 35433327 35434179 + 3.24255413875664 NA Intergenic Intergenic 58012 NM_177741 244416 Mm.247126 NM_177741 ENSMUSG00000046794 Ppp1r3b 6430576E21|AW821953|GL|PTG protein phosphatase 1, regulatory (inhibitor) subunit 3B protein-coding common_peak2_40_338_-0.443698198070918_8.18329236410088_3.24255413875664 chr3 10330774 10331672 + 3.24255413875664 NA TTS (NM_001010834) TTS (NM_001010834) 216 NM_018864 55980 Mm.183042 NM_018864 ENSMUSG00000027531 Impa1 2610002K09Rik|2900059K10Rik|AI325909 inositol (myo)-1(or 4)-monophosphatase 1 protein-coding common_peak2_289_2481_0.146093812446887_11.3503343063538_3.24118038091986 chr16 52030696 52034823 + 3.24118038091986 NA intron (NM_001033238, intron 1 of 17) intron (NM_001033238, intron 1 of 17) 1210 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding unique_peak1_13_31_1.05995243883157_5.52997621941578_3.24103844268744 chr17 17602869 17603266 + 3.24103844268744 NA intron (NM_172827, intron 1 of 17) ORR1E|LTR|ERVL-MaLR 21422 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_13_31_1.05995243883157_5.52997621941578_3.24103844268744 chr9 41077513 41077836 + 3.24103844268744 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) -73046 NM_019465 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding unique_peak2_23_195_-0.600934376023114_7.31424265610365_3.24098712814568 chr2 7404148 7405186 + 3.24098712814568 NA Intergenic IAPEz-int|LTR|ERVK -8469 NM_001110231 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_23_195_-0.600934376023114_7.31424265610365_3.24098712814568 chr14 27243993 27244529 + 3.24098712814568 NA intron (NM_027871, intron 1 of 10) intron (NM_027871, intron 1 of 10) 6251 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_97_873_-0.268000921403559_9.63748900879882_3.23972091537112 chr10 82762713 82764161 + 3.23972091537112 NA intron (NM_010914, intron 1 of 7) CpG 704 NM_010914 18045 Mm.245998 NM_010914 ENSMUSG00000020248 Nfyb AA985999|Cbf-A nuclear transcription factor-Y beta protein-coding common_peak2_97_873_-0.268000921403559_9.63748900879882_3.23972091537112-2 chr13 119689538 119691243 + 3.23972091537112 NA promoter-TSS (NM_001291439) promoter-TSS (NM_001291439) 39 NM_001291439 208715 Mm.61526 NM_145942 ENSMUSG00000093930 Hmgcs1 B130032C06Rik 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 protein-coding common_peak1_257_2133_0.157129536769164_11.137909229209_3.23800271892418 chr19 46044420 46046179 + 3.23800271892418 NA promoter-TSS (NM_001113408) promoter-TSS (NM_001113408) -88 NM_001113408 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding common_peak2_36_304_-0.472881781238838_8.01622454183083_3.23771254206392 chr6 91440331 91441715 + 3.23771254206392 NA promoter-TSS (NR_045980) promoter-TSS (NR_045980) 36 NR_038153 69798 Mm.229265 NR_038153 ENSMUSG00000100680 1810044D09Rik - RIKEN cDNA 1810044D09 gene ncRNA common_peak2_100_617_0.285385165701083_9.41415561075492_3.23751033867812 chr7 135537333 135539004 + 3.23751033867812 NA intron (NM_001316678, intron 1 of 19) CpG 344 NM_001316678 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding unique_peak1_17_48_0.889975517757459_6.05969760299394_3.23748825288584-3 chr6 129761518 129761975 + 3.23748825288584 NA Intergenic L1_Mur2|LINE|L1 14103 NM_001014997 232415 Mm.290598 NM_001014997 ENSMUSG00000071158 Gm156 Klrh1 predicted gene 156 protein-coding common_peak1_17_48_0.889975517757459_6.05969760299394_3.23748825288584-2 chr9 57271852 57272228 + 3.23748825288584 NA Intergenic Intergenic -9441 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding unique_peak1_17_48_0.889975517757459_6.05969760299394_3.23748825288584 chr16 49847800 49848252 + 3.23748825288584 NA Intergenic ORR1A4|LTR|ERVL-MaLR -7628 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_17_48_0.889975517757459_6.05969760299394_3.23748825288584-3 chrX 16618424 16618870 + 3.23748825288584 NA Intergenic CpG -1051 NM_173740 17161 Mm.21108 NM_173740 ENSMUSG00000025037 Maoa 1110061B18Rik|AA407771 monoamine oxidase A protein-coding common_peak1_17_48_0.889975517757459_6.05969760299394_3.23748825288584 chr14 54181428 54181783 + 3.23748825288584 NA Intergenic Intergenic 72324 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak1_17_48_0.889975517757459_6.05969760299394_3.23748825288584-2 chr16 94519342 94519792 + 3.23748825288584 NA intron (NM_007834, intron 1 of 7) intron (NM_007834, intron 1 of 7) 7062 NM_007834 13185 Mm.7472 NM_007834 ENSMUSG00000022898 Dscr3 AW538125|Dcra Down syndrome critical region gene 3 protein-coding common_peak2_161_1161_0.210560040774705_10.2876743737919_3.23732563599156 chr9 65031732 65033520 + 3.23732563599156 NA intron (NM_028906, intron 1 of 20) CpG 168 NM_028906 74388 Mm.202749 NM_028906 ENSMUSG00000032393 Dpp8 2310004I03Rik|4932434F09Rik|AI666706|DPP VIII dipeptidylpeptidase 8 protein-coding common_peak2_80_457_0.327138294895935_9.00277293554491_3.23725204484105 chr11 51880169 51881919 + 3.23725204484105 NA Intergenic Intergenic -23563 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak2_80_457_0.327138294895935_9.00277293554491_3.23725204484105-2 chr6 43665469 43666767 + 3.23725204484105 NA intron (NM_001311111, intron 1 of 7) GC_rich|Low_complexity|Low_complexity 160 NM_001311111 29807 Mm.320979 NM_013861 ENSMUSG00000029735 Tpk1 - thiamine pyrophosphokinase protein-coding common_peak2_92_552_0.299681050652882_9.26097619556115_3.23709532593983 chr2 155955862 155957086 + 3.23709532593983 NA promoter-TSS (NM_008383) promoter-TSS (NM_008383) -84 NM_001129999 16328 Mm.288729 NM_008383 ENSMUSG00000038241 Cep250 AW490617|B230210E21Rik|Cep2|Inmp centrosomal protein 250 protein-coding common_peak2_107_676_0.27242016563731_9.53922210639365_3.23621974314614 chr8 116732000 116733540 + 3.23621974314614 NA intron (NM_029441, intron 1 of 6) GC_rich|Low_complexity|Low_complexity 221 NM_029441 75796 Mm.159575 NM_029441 ENSMUSG00000031758 Cdyl2 1700029M19Rik|4930453I21Rik|Gm20194 chromodomain protein, Y chromosome-like 2 protein-coding common_peak1_24_82_0.710975760789459_6.73052731174165_3.23608087842237 chr1 152083519 152084084 + 3.23608087842237 NA intron (NM_197990, intron 1 of 5) intron (NM_197990, intron 1 of 5) 6519 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak2_24_82_0.710975760789459_6.73052731174165_3.23608087842237 chr1 127640963 127641548 + 3.23608087842237 NA intron (NM_028135, intron 2 of 7) intron (NM_028135, intron 2 of 7) 36766 NM_028135 72160 Mm.281287 NM_028135 ENSMUSG00000026347 Tmem163 2610024A01Rik|SV31 transmembrane protein 163 protein-coding common_peak1_24_82_0.710975760789459_6.73052731174165_3.23608087842237-3 chr17 23739864 23740356 + 3.23608087842237 NA 5' UTR (NM_023824, exon 1 of 3) 5' UTR (NM_023824, exon 1 of 3) 220 NM_023824 76498 Mm.491253 NM_023824 ENSMUSG00000023909 Paqr4 1500004C10Rik progestin and adipoQ receptor family member IV protein-coding common_peak1_24_82_0.710975760789459_6.73052731174165_3.23608087842237-2 chr12 25316084 25316660 + 3.23608087842237 NA Intergenic Intergenic 187198 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_157_1123_0.214285082078746_10.2415688612603_3.23492777641302 chr10 117792019 117793504 + 3.23492777641302 NA promoter-TSS (NM_134010) promoter-TSS (NM_134010) -56 NM_134010 103468 Mm.12568 NM_134010 ENSMUSG00000052798 Nup107 AW541137|C76801 nucleoporin 107 protein-coding common_peak1_96_863_-0.269549138800059_9.62011293276344_3.23477707280457 chr1 182281943 182283136 + 3.23477707280457 NA intron (NM_007853, intron 1 of 2) CpG 220 NM_007853 13244 Mm.29648 NM_007853 ENSMUSG00000038633 Degs1 AA536663|Degs|Des1|Mdes delta(4)-desaturase, sphingolipid 1 protein-coding common_peak1_126_1169_-0.230082120296721_10.0772517543224_3.23421352245317 chr11 98460185 98462645 + 3.23421352245317 NA Intergenic Intergenic 14581 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak1_617_7388_-0.0888687021037384_12.8067290621682_3.2339477235605 chr2 32711862 32716585 + 3.2339477235605 NA Intergenic Intergenic -1251 NR_039536 100628606 NR_039536 ENSMUSG00000105841 Mir3960 mmu-mir-3960 microRNA 3960 ncRNA common_peak2_59_301_0.396864004458982_8.43683674155457_3.23342897763025 chr8 91313306 91314277 + 3.23342897763025 NA promoter-TSS (NM_173431) promoter-TSS (NM_173431) 266 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding common_peak1_30_253_-0.522002482037859_7.72768344575324_3.23325223547553-2 chr9 110659636 110660377 + 3.23325223547553 NA intron (NM_028312, intron 1 of 6) B4A|SINE|B4 3503 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_30_253_-0.522002482037859_7.72768344575324_3.23325223547553 chr11 94676898 94677451 + 3.23325223547553 NA intron (NM_145828, intron 1 of 10) CpG 319 NM_145828 217119 Mm.100638 NM_145828 ENSMUSG00000020868 Xylt2 E030002B02Rik|XT-II|XT2|xylT-II xylosyltransferase II protein-coding common_peak1_198_1954_-0.175971098347297_10.8449673430211_3.23321880480846 chr17 74528324 74529688 + 3.23321880480846 NA intron (NM_007566, intron 1 of 72) CpG 711 NM_007566 12211 Mm.442564 NM_007566 ENSMUSG00000024073 Birc6 A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289 baculoviral IAP repeat-containing 6 protein-coding common_peak1_49_232_0.448441358668461_8.08840682398851_3.233085038758 chr7 122968983 122969792 + 3.233085038758 NA non-coding (NR_045614, exon 1 of 1) non-coding (NR_045614, exon 1 of 1) 1072 NR_045614 73951 Mm.389936 NR_045614 4930413G21Rik - RIKEN cDNA 4930413G21 gene ncRNA common_peak2_49_232_0.448441358668461_8.08840682398851_3.233085038758 chr1 192770247 192771392 + 3.233085038758 NA intron (NM_144881, intron 1 of 11) CpG 400 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding unique_peak2_6_64_-1.18902768538324_5.42785397033683_3.23296565093675 chr6 133720460 133721087 + 3.23296565093675 NA Intergenic Intergenic 46635 NM_001177652 545886 Mm.449716 NM_001177652 ENSMUSG00000108106 Gm5886 EG545886|smarp predicted gene 5886 protein-coding common_peak2_106_667_0.275266126881721_9.52133735591491_3.23235436482182 chr1 39367843 39369668 + 3.23235436482182 NA intron (NM_001252218, intron 1 of 3) intron (NM_001252218, intron 1 of 3) 904 NM_001252218 114641 Mm.379302 NM_053257 ENSMUSG00000073702 Rpl31 Dts ribosomal protein L31 protein-coding common_peak1_54_462_-0.37357736487432_8.66807970082307_3.23222676166446-2 chr8 71487755 71488456 + 3.23222676166446 NA promoter-TSS (NM_032544) promoter-TSS (NM_032544) 2 NM_032544 70359 Mm.142112 NM_032544 ENSMUSG00000007610 Gtpbp3 2410009F13Rik|AI607903 GTP binding protein 3 protein-coding common_peak1_54_462_-0.37357736487432_8.66807970082307_3.23222676166446 chr15 76899416 76900428 + 3.23222676166446 NA promoter-TSS (NM_025536) promoter-TSS (NM_025536) -19 NM_025536 66398 Mm.291716 NM_025536 ENSMUSG00000055041 Commd5 2310065H03Rik|AI854466|D15Ertd81e|Hcarg COMM domain containing 5 protein-coding common_peak1_25_212_-0.579288375584906_7.44506543243338_3.23186899621802-2 chr2 93187657 93188286 + 3.23186899621802 NA intron (NM_001025246, intron 1 of 7) CpG 387 NM_001025246 277414 Mm.41033 NM_001025246 ENSMUSG00000068735 Trp53i11 Tp53i11 transformation related protein 53 inducible protein 11 protein-coding common_peak1_35_143_0.561372671616711_7.45061133725067_3.23186899621802 chr1 133347273 133347959 + 3.23186899621802 NA Intergenic Intergenic -2950 NM_031193 19702 Mm.220955 NM_031193 Ren2 Ren|Ren-2|Ren-B|Rn-2|Rnr renin 2 tandem duplication of Ren1 protein-coding common_peak1_25_212_-0.579288375584906_7.44506543243338_3.23186899621802 chr1 53824087 53824750 + 3.23186899621802 NA intron (NM_001001883, intron 28 of 28) intron (NM_001001883, intron 28 of 28) -25006 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA common_peak1_22_72_0.748636245213492_6.56414268148676_3.23139838454653-4 chr16 32659399 32659781 + 3.23139838454653 NA intron (NM_016788, intron 1 of 15) intron (NM_016788, intron 1 of 15) 8607 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os ENSMUSG00000075265|Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA common_peak1_22_72_0.748636245213492_6.56414268148676_3.23139838454653-2 chr1 181881415 181881897 + 3.23139838454653 NA Intergenic Intergenic -39255 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_22_72_0.748636245213492_6.56414268148676_3.23139838454653-6 chr3 89250734 89251286 + 3.23139838454653 NA Intergenic Intergenic 4537 NM_001310625 66059 Mm.177991 NM_025327 ENSMUSG00000042747 Krtcap2 0610010I12Rik|Kcp2 keratinocyte associated protein 2 protein-coding common_peak1_22_72_0.748636245213492_6.56414268148676_3.23139838454653-5 chr2 84826998 84827547 + 3.23139838454653 NA intron (NM_013899, intron 1 of 2) intron (NM_013899, intron 1 of 2) 251 NM_013899 30059 Mm.21826 NM_013899 ENSMUSG00000027076 Timm10 Tim13|Timm13a translocase of inner mitochondrial membrane 10 protein-coding unique_peak2_22_72_0.748636245213492_6.56414268148676_3.23139838454653 chr16 35696370 35696959 + 3.23139838454653 NA 3' UTR (NM_153550, exon 9 of 9) 3' UTR (NM_153550, exon 9 of 9) 72692 NM_153550 224132 Mm.24094 NM_153550 ENSMUSG00000022848 Dirc2 RCC4 disrupted in renal carcinoma 2 (human) protein-coding common_peak2_22_72_0.748636245213492_6.56414268148676_3.23139838454653 chr4 33260947 33261612 + 3.23139838454653 NA Intergenic Intergenic -12492 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding common_peak1_22_72_0.748636245213492_6.56414268148676_3.23139838454653-7 chr8 70344216 70344707 + 3.23139838454653 NA intron (NM_001122829, intron 1 of 23) intron (NM_001122829, intron 1 of 23) 8812 NM_030680 19704 Mm.258280 NM_030680 ENSMUSG00000058301 Upf1 B430202H16Rik|NORF1|PNORF-1|Rent1|Upflp UPF1 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak1_22_72_0.748636245213492_6.56414268148676_3.23139838454653-3 chr13 95616359 95616858 + 3.23139838454653 NA intron (NM_010169, intron 1 of 1) intron (NM_010169, intron 1 of 1) 1825 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding common_peak1_22_72_0.748636245213492_6.56414268148676_3.23139838454653 chr1 54835810 54836384 + 3.23139838454653 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 90290 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_60_308_0.393056423142598_8.46799123947567_3.2311140060356 chr17 75551228 75551864 + 3.2311140060356 NA intron (NM_133747, intron 1 of 7) CpG 400 NM_133747 72722 Mm.24641 NM_133747 ENSMUSG00000002017 Fam98a 2810405J04Rik|AL024114 family with sequence similarity 98, member A protein-coding common_peak1_109_993_-0.249198711990015_9.83250268556728_3.2310764436504 chr8 60982481 60983869 + 3.2310764436504 NA 5' UTR (NM_007711, exon 1 of 12) 5' UTR (NM_007711, exon 1 of 12) 136 NM_173873 12725 Mm.25263 NM_007711 ENSMUSG00000004319 Clcn3 Clc3 chloride channel, voltage-sensitive 3 protein-coding common_peak2_151_1434_-0.206633884607092_10.3835180792595_3.23068092864987 chr1 172309349 172313095 + 3.23068092864987 NA Intergenic Intergenic -1145 NM_080419 140559 Mm.271717 NM_080419 ENSMUSG00000038034 Igsf8 ESTM34|EWI-2|KCT-4|PGRL immunoglobulin superfamily, member 8 protein-coding common_peak1_115_1055_-0.242506182473173_9.92314102812187_3.22987969715866 chr14 55604069 55605128 + 3.22987969715866 NA promoter-TSS (NM_001159418) promoter-TSS (NM_001159418) 19 NM_001159418 16391 Mm.2032 NM_008394 ENSMUSG00000002325 Irf9 Irf-9|Isgf3g|p48 interferon regulatory factor 9 protein-coding common_peak2_75_418_0.342782392070252_8.88219762973448_3.2297367635062 chr17 28176913 28178048 + 3.2297367635062 NA promoter-TSS (NM_172617) promoter-TSS (NM_172617) 62 NM_172617 224656 Mm.267359 NM_172617 ENSMUSG00000024220 Zfp523 2810027J07|BC025615|Znf76 zinc finger protein 523 protein-coding common_peak2_77_434_0.334684170058127_8.93221367576515_3.22916741589842 chr12 87199204 87200559 + 3.22916741589842 NA promoter-TSS (NM_001290288) promoter-TSS (NM_001290288) 348 NM_001033475 382620 Mm.374912 NM_001033475 ENSMUSG00000034111 Tmed8 6430595O10Rik|AI447224|Gm1184|Mem1 transmembrane p24 trafficking protein 8 protein-coding common_peak1_12_27_1.12145401139697_5.36808192775609_3.22913603282893 chr1 106618466 106618828 + 3.22913603282893 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -72016 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_62_322_0.386218805257858_8.52849975732285_3.22852771541627 chr10 80984986 80986390 + 3.22852771541627 NA intron (NM_010319, intron 2 of 3) intron (NM_010319, intron 2 of 3) 15677 NM_001038655 14708 Mm.222496 NM_010319 ENSMUSG00000048240 Gng7 AI840417 guanine nucleotide binding protein (G protein), gamma 7 protein-coding common_peak2_62_322_0.386218805257858_8.52849975732285_3.22852771541627-2 chr9 54641983 54643406 + 3.22852771541627 NA exon (NM_053178, exon 2 of 14) exon (NM_053178, exon 2 of 14) 19191 NM_053178 94180 Mm.20592 NM_053178 ENSMUSG00000032281 Acsbg1 BG1|Bgm|E230019G03Rik|GR-LACS|Lpd|R75185 acyl-CoA synthetase bubblegum family member 1 protein-coding common_peak1_46_391_-0.41157875668919_8.40892046577061_3.22787050166555 chr3 51483962 51484843 + 3.22787050166555 NA exon (NM_016858, exon 1 of 2) exon (NM_016858, exon 1 of 2) 436 NM_016858 19338 Mm.1664 NM_016858 ENSMUSG00000027739 Rab33b - RAB33B, member RAS oncogene family protein-coding common_peak2_46_391_-0.41157875668919_8.40892046577061_3.22787050166555 chr5 148819116 148821250 + 3.22787050166555 NA Intergenic Intergenic 42220 NR_131106 78015 Mm.243839 NR_131106 ENSMUSG00000085740 4930505K14Rik - RIKEN cDNA 4930505K14 gene ncRNA common_peak1_185_1807_-0.182749930341242_10.7288039972446_3.2278098383399 chr17 69382871 69385023 + 3.2278098383399 NA promoter-TSS (NM_009547) promoter-TSS (NM_009547) -31 NM_009547 22666 Mm.29434 NM_009547 ENSMUSG00000049672 Zbtb14 ZF5|Zfp161|b2b1982Clo zinc finger and BTB domain containing 14 protein-coding common_peak1_84_745_-0.291389972402746_9.39733683405386_3.22655166427938 chr12 82208836 82210013 + 3.22655166427938 NA intron (NM_001167983, intron 1 of 23) B1_Mus1|SINE|Alu 39408 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak1_18_155_-0.685038015465358_6.94288321112957_3.22592406625904 chr16 75855027 75855421 + 3.22592406625904 NA Intergenic Intergenic 54042 NM_023380 67742 Mm.131406 NM_023380 ENSMUSG00000022876 Samsn1 4930571B16Rik|930571B16Rik|Hacs1|SLy2 SAM domain, SH3 domain and nuclear localization signals, 1 protein-coding common_peak1_156_1114_0.214647639597983_10.2301518146067_3.22550565565437 chr1 160051756 160053345 + 3.22550565565437 NA intron (NM_001162896, intron 1 of 2) intron (NM_001162896, intron 1 of 2) 8170 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding common_peak1_47_399_-0.403468410496274_8.44212198452659_3.22500851355894 chr11 75154473 75155350 + 3.22500851355894 NA intron (NM_001002764, intron 15 of 18) intron (NM_001002764, intron 15 of 18) 13241 NM_001098203 15248 Mm.57250 NM_010430 ENSMUSG00000043099 Hic1 AA408311|HIC-1 hypermethylated in cancer 1 protein-coding common_peak1_47_399_-0.403468410496274_8.44212198452659_3.22500851355894-2 chr14 103653452 103654541 + 3.22500851355894 NA intron (NM_198014, intron 1 of 6) intron (NM_198014, intron 1 of 6) 3753 NM_198014 105439 Mm.27548 NM_198014 ENSMUSG00000055717 Slain1 9630044O09Rik|AA675320|AW742596 SLAIN motif family, member 1 protein-coding common_peak1_47_399_-0.403468410496274_8.44212198452659_3.22500851355894-3 chr17 35879627 35880377 + 3.22500851355894 NA exon (NM_026987, exon 1 of 20) exon (NM_026987, exon 1 of 20) 224 NM_026987 69192 Mm.390986 NM_026987 ENSMUSG00000024422 Dhx16 2410006N22Rik|DBP2|Ddx16|mKIAA0577 DEAH (Asp-Glu-Ala-His) box polypeptide 16 protein-coding common_peak1_122_805_0.250941752690743_9.78010690487334_3.22417379593484 chr8 119783389 119785000 + 3.22417379593484 NA Intergenic Intergenic -5778 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding common_peak1_41_347_-0.438856540863874_8.22351522541679_3.22397689812086 chr6 122270339 122271279 + 3.22397689812086 NA 3' UTR (NM_016970, exon 5 of 5) 3' UTR (NM_016970, exon 5 of 5) 12024 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak1_37_312_-0.463042332349372_8.05849768075793_3.22395613949057 chr11 59417927 59418678 + 3.22395613949057 NA intron (NM_144521, intron 4 of 4) intron (NM_144521, intron 4 of 4) 31654 NM_144521 67826 Mm.26680 NM_144521 ENSMUSG00000009894 Snap47 1110031B06Rik|SNAP-47 synaptosomal-associated protein, 47 protein-coding common_peak2_56_480_-0.365394364219869_8.72719590166011_3.22328091606521-2 chr7 141538822 141540544 + 3.22328091606521 NA intron (NM_026522, intron 1 of 10) CpG 174 NM_026522 68038 Mm.245355 NM_026522 ENSMUSG00000025512 Chid1 3110023E09Rik|AI841869 chitinase domain containing 1 protein-coding common_peak2_56_480_-0.365394364219869_8.72719590166011_3.22328091606521 chr4 156109171 156110565 + 3.22328091606521 NA promoter-TSS (NM_177205) promoter-TSS (NM_177205) -130 NM_145557 230996 Mm.318925 NM_145557 ENSMUSG00000059939 9430015G10Rik - RIKEN cDNA 9430015G10 gene protein-coding common_peak1_15_132_-0.759029172376022_6.67576784931318_3.22306014406787-2 chr3 98012958 98013393 + 3.22306014406787 NA promoter-TSS (NM_010928) promoter-TSS (NM_010928) -363 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak1_15_132_-0.759029172376022_6.67576784931318_3.22306014406787-3 chr6 91109320 91109608 + 3.22306014406787 NA intron (NM_018815, intron 1 of 39) intron (NM_018815, intron 1 of 39) 7362 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak1_15_132_-0.759029172376022_6.67576784931318_3.22306014406787 chr11 101278635 101278989 + 3.22306014406787 NA promoter-TSS (NM_026562) promoter-TSS (NM_026562) 136 NM_026618 52469 Mm.52 NM_026618 ENSMUSG00000017188 Coa3 1810033A19Rik|Ccdc56|D11Ertd99e|HSPC009 cytochrome C oxidase assembly factor 3 protein-coding unique_peak2_15_132_-0.759029172376022_6.67576784931318_3.22306014406787 chr12 33220186 33221326 + 3.22306014406787 NA intron (NM_028139, intron 3 of 3) MIRb|SINE|MIR 73070 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding unique_peak2_15_132_-0.759029172376022_6.67576784931318_3.22306014406787-2 chr15 75681140 75682101 + 3.22306014406787 NA Intergenic Intergenic -2830 NM_028404 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding common_peak2_186_1402_0.192618380482125_10.550608483861_3.22266701181172 chr1 173450247 173453413 + 3.22266701181172 NA intron (NM_001013779, intron 2 of 8) intron (NM_001013779, intron 2 of 8) 31226 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_44_199_0.482322447789907_7.88501741366968_3.22216826131924 chr9 66888150 66888812 + 3.22216826131924 NA intron (NM_173413, intron 1 of 7) intron (NM_173413, intron 1 of 7) 31224 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak2_276_2867_-0.143609259654374_11.4140246788747_3.2214139555495 chr2 166152038 166156142 + 3.2214139555495 NA intron (NM_028072, intron 1 of 20) intron (NM_028072, intron 1 of 20) 1195 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak2_72_396_0.349323829242671_8.80765711176429_3.22124436918469 chr4 135897929 135899626 + 3.22124436918469 NA intron (NM_009924, intron 1 of 1) intron (NM_009924, intron 1 of 1) 3588 NM_009924 12802 Mm.297251 NM_009924 ENSMUSG00000062585 Cnr2 CB-2|CB2|CB2-R cannabinoid receptor 2 (macrophage) protein-coding common_peak2_64_337_0.376035084050713_8.58889697830754_3.22081191449148 chrX 17571411 17572527 + 3.22081191449148 NA promoter-TSS (NM_001313746) promoter-TSS (NM_001313746) 38 NM_001313746 72018 Mm.41558 NM_028058 ENSMUSG00000025040 Fundc1 1500005J14Rik|1810033P05Rik FUN14 domain containing 1 protein-coding common_peak1_133_1241_-0.221293446884403_10.1678027347783_3.220760494128 chr18 39010612 39012548 + 3.220760494128 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 18435 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding unique_peak2_29_109_0.627296719073043_7.09500807306118_3.22063098241565 chr9 7220948 7221624 + 3.22063098241565 NA Intergenic Intergenic 36720 NM_029775 76863 Mm.27293 NM_029775 ENSMUSG00000032002 Dcun1d5 3110001A18Rik|4833420K19Rik|AW060460|D430047L21Rik DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) protein-coding common_peak1_29_109_0.627296719073043_7.09500807306118_3.22063098241565-2 chr10 39420504 39420953 + 3.22063098241565 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 50929 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_29_109_0.627296719073043_7.09500807306118_3.22063098241565 chr17 17597291 17598252 + 3.22063098241565 NA intron (NM_172827, intron 1 of 17) Lx3B|LINE|L1 26718 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_29_109_0.627296719073043_7.09500807306118_3.22063098241565 chr1 172549988 172550694 + 3.22063098241565 NA intron (NR_040558, intron 1 of 2) intron (NR_040558, intron 1 of 2) 465 NR_040558 71319 Mm.123774 NR_040558 ENSMUSG00000085184 4933439K11Rik - RIKEN cDNA 4933439K11 gene ncRNA common_peak1_57_489_-0.361362313303646_8.75595678235075_3.2198242889907 chr5 108668796 108669798 + 3.2198242889907 NA TTS (NM_174870) TTS (NM_174870) 5499 NM_001310691 231583 Mm.440571 NM_174870 ENSMUSG00000046959 Slc26a1 Sat1 solute carrier family 26 (sulfate transporter), member 1 protein-coding common_peak2_377_3489_0.123344666194406_11.8306836541942_3.21972938918766 chr13 52979026 52983408 + 3.21972938918766 NA promoter-TSS (NM_017373) promoter-TSS (NM_017373) -178 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak2_201_1552_0.18261839040451_10.6921513095896_3.21932583294989 chr11 118336125 118339481 + 3.21932583294989 NA intron (NM_021440, intron 2 of 2) L1M4|LINE|L1 4731 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 BC100451 Cep295nl|Ddc8|FS39|Kiaa1731nl cDNA sequence BC100451 protein-coding common_peak2_113_1034_-0.244304021650157_9.89326304156161_3.21796025841172 chr13 38500843 38505263 + 3.21796025841172 NA intron (NM_145367, intron 9 of 9) RMER17B|LTR|ERVK 24861 NM_001289599 105245 Mm.28622 NM_145367 ENSMUSG00000038991 Txndc5 AL022641|ERp46|PC-TRP thioredoxin domain containing 5 protein-coding common_peak2_113_1034_-0.244304021650157_9.89326304156161_3.21796025841172-2 chr6 87838920 87840347 + 3.21796025841172 NA promoter-TSS (NM_133934) promoter-TSS (NM_133934) -874 NM_133934 57905 Mm.241546 NM_133934 ENSMUSG00000030056 Isy1 5830446M03Rik|AI181014|AU020769 ISY1 splicing factor homolog protein-coding common_peak1_116_753_0.258657252492482_9.68774933951491_3.21789988658651 chr16 17200658 17201747 + 3.21789988658651 NA intron (NM_009456, intron 1 of 3) CpG 290 NM_009456 22195 Mm.3074 NM_009456 ENSMUSG00000038965 Ube2l3 C79827|UbcM4|Ubce7 ubiquitin-conjugating enzyme E2L 3 protein-coding common_peak2_39_168_0.516867102534948_7.65931298754966_3.21722486001388 chr11 101416794 101417861 + 3.21722486001388 NA intron (NM_144829, intron 1 of 11) CpG-2640 106 NM_144829 69684 Mm.146283 NM_144829 ENSMUSG00000075528 Aarsd1 1110069E20Rik|2310044P18Rik|AA589600|AlaX|AlaXp-II alanyl-tRNA synthetase domain containing 1 protein-coding common_peak2_39_168_0.516867102534948_7.65931298754966_3.21722486001388-2 chr5 3669486 3670584 + 3.21722486001388 NA exon (NM_029154, exon 8 of 11) exon (NM_029154, exon 8 of 11) 13031 NM_029154 75010 Mm.85064 NM_029141 ENSMUSG00000014529 Tmbim7 4930403J02Rik|4930500J03Rik|4930511M11Rik|Lfg5|Lgf5|Tmbim1b transmembrane BAX inhibitor motif containing 7 protein-coding common_peak2_42_355_-0.430006260712448_8.26073030061017_3.21658759640907 chr5 149014877 149015999 + 3.21658759640907 NA Intergenic Intergenic 8476 NR_040429 100503307 Mm.188008 NR_040429 ENSMUSG00000086610 Gm15408 OTTMUSG00000021225 predicted gene 15408 ncRNA common_peak1_34_286_-0.483461212152154_7.92317632059961_3.2159722256371 chr2 60810369 60811083 + 3.2159722256371 NA intron (NM_001141931, intron 2 of 13) intron (NM_001141931, intron 2 of 13) 70712 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_234_1890_0.166303026354575_10.968085161127_3.21584943889765 chr11 51583631 51585603 + 3.21584943889765 NA promoter-TSS (NM_028398) promoter-TSS (NM_028398) -140 NM_028398 72947 Mm.256875 NM_028398 ENSMUSG00000020359 Phykpl 2900006B13Rik|Agxt2l2 5-phosphohydroxy-L-lysine phospholyase protein-coding common_peak2_32_126_0.588635260888714_7.28300231721652_3.21581432724778 chr2 31106333 31107567 + 3.21581432724778 NA intron (NM_001177648, intron 1 of 16) intron (NM_001177648, intron 1 of 16) -10450 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding unique_peak2_32_126_0.588635260888714_7.28300231721652_3.21581432724778 chr3 102734415 102735590 + 3.21581432724778 NA promoter-TSS (NM_001243132) promoter-TSS (NM_001243132) -213 NM_001243132 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding common_peak2_87_512_0.31020734945961_9.15791869033686_3.2151230948071 chr5 32147719 32149717 + 3.2151230948071 NA intron (NM_008037, intron 2 of 3) intron (NM_008037, intron 2 of 3) 12246 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_126_841_0.24453427110765_9.83994355862022_3.21510462374225 chr11 52003122 52005125 + 3.21510462374225 NA promoter-TSS (NM_001166654) promoter-TSS (NM_001166654) -98 NM_001166657 213084 Mm.280557 NM_153785 ENSMUSG00000020389 Cdkl3 AI852479|B230379H01Rik cyclin-dependent kinase-like 3 protein-coding common_peak2_349_3161_0.12954196022984_11.6913926324733_3.21493655699662 chr6 122279725 122286017 + 3.21493655699662 NA promoter-TSS (NM_016970) promoter-TSS (NM_016970) -38 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak2_139_957_0.230788491160066_10.0192760913162_3.21431033039274 chr11 88998717 89000845 + 3.21431033039274 NA exon (NM_009546, exon 1 of 9) exon (NM_009546, exon 1 of 9) 378 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding common_peak1_123_1137_-0.232378015199563_10.0360958347068_3.21426859117592-2 chrX 48138572 48140358 + 3.21426859117592 NA Intergenic Intergenic -6971 NM_001313749 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding common_peak2_123_1137_-0.232378015199563_10.0360958347068_3.21426859117592 chr8 36180546 36183736 + 3.21426859117592 NA Intergenic Intergenic 67375 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding common_peak1_123_1137_-0.232378015199563_10.0360958347068_3.21426859117592 chr15 5517335 5519156 + 3.21426859117592 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 21927 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_79_696_-0.300655995864934_9.29468684793596_3.21410945107959 chr5 88553134 88554254 + 3.21410945107959 NA promoter-TSS (NM_023054) promoter-TSS (NM_023054) -789 NM_023054 65961 Mm.490364 NM_023054 ENSMUSG00000070697 Utp3 2400011K09Rik|AW557551|C87704|Crl1|Crlz1|Sas10 UTP3 small subunit processome component protein-coding common_peak1_19_57_0.833153232503204_6.27455761137917_3.21373299491782 chr11 21448163 21448636 + 3.21373299491782 NA Intergenic L1Md_F2|LINE|L1 62781 NR_028259 237694 Mm.72926 NM_172792 ENSMUSG00000078962 4932414J04Rik - RIKEN cDNA 4932414J04 gene ncRNA unique_peak1_19_57_0.833153232503204_6.27455761137917_3.21373299491782-2 chr5 115977518 115978038 + 3.21373299491782 NA intron (NM_007708, intron 27 of 46) intron (NM_007708, intron 27 of 46) 46650 NM_031869 19079 Mm.458152 NM_031869 ENSMUSG00000029513 Prkab1 1300015D22Rik|AU021155|E430008F22 protein kinase, AMP-activated, beta 1 non-catalytic subunit protein-coding common_peak1_19_57_0.833153232503204_6.27455761137917_3.21373299491782-2 chr2 30628800 30629169 + 3.21373299491782 NA Intergenic B4A|SINE|B4 33940 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding unique_peak1_19_57_0.833153232503204_6.27455761137917_3.21373299491782 chr11 53799713 53800278 + 3.21373299491782 NA intron (NR_033332, intron 3 of 3) LTR48B|LTR|ERV1 29522 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak1_52_252_0.432748190748802_8.19936767006871_3.21256377278802 chr6 129184022 129184943 + 3.21256377278802 NA intron (NM_053109, intron 3 of 4) intron (NM_053109, intron 3 of 4) 3867 NM_053109 93694 Mm.197536 NM_053109 ENSMUSG00000030157 Clec2d Clr-b|Clrb|Ocil C-type lectin domain family 2, member d protein-coding common_peak2_99_892_-0.263276550612128_9.67087808981516_3.21233933901512 chr1 179545436 179547225 + 3.21233933901512 NA promoter-TSS (NM_146105) promoter-TSS (NM_146105) -63 NM_008249 15278 Mm.293529 NM_008249 ENSMUSG00000026492 Tfb2m Hkp1 transcription factor B2, mitochondrial protein-coding common_peak2_143_994_0.225969580000724_10.0715375054314_3.21208754621627 chr5 8421965 8424206 + 3.21208754621627 NA promoter-TSS (NM_001190717) promoter-TSS (NM_001190717) 247 NM_001289595 319653 Mm.146262 NM_178766 ENSMUSG00000054099 Slc25a40 B230315F11Rik solute carrier family 25, member 40 protein-coding common_peak1_96_585_0.290581508941161_9.34004760889283_3.21199915176635 chr11 75653219 75654710 + 3.21199915176635 NA intron (NM_001080774, intron 1 of 31) intron (NM_001080774, intron 1 of 31) 1814 NM_001080774 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding common_peak2_38_320_-0.453486037514442_8.09968646836508_3.21174163030282 chr18 60843555 60845112 + 3.21174163030282 NA intron (NM_011552, intron 2 of 24) intron (NM_011552, intron 2 of 24) 4631 NM_011552 21453 Mm.486251 NM_011552 ENSMUSG00000024613 Tcof1 AA408847|AW209012|treacle treacle ribosome biogenesis factor 1 protein-coding common_peak2_38_320_-0.453486037514442_8.09968646836508_3.21174163030282-2 chrX 159627097 159628481 + 3.21174163030282 NA intron (NM_001135727, intron 1 of 17) CpG 517 NM_001135727 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_38_320_-0.453486037514442_8.09968646836508_3.21174163030282 chr9 114730283 114730961 + 3.21174163030282 NA promoter-TSS (NM_026036) promoter-TSS (NM_026036) -581 NM_026036 67213 Mm.28858 NM_026036 ENSMUSG00000032434 Cmtm6 2810051A14Rik|AA536733|Cklfsf6 CKLF-like MARVEL transmembrane domain containing 6 protein-coding common_peak1_26_219_-0.559152146685065_7.50178364018213_3.21008627156938 chr7 19148476 19149162 + 3.21008627156938 NA intron (NM_026111, intron 1 of 6) intron (NM_026111, intron 1 of 6) 377 NM_026111 67369 Mm.234876 NM_026111 ENSMUSG00000030407 Qpctl 1810019P04Rik|BB101812|gQC glutaminyl-peptide cyclotransferase-like protein-coding common_peak1_229_2309_-0.160498434145236_11.0934279192308_3.20859420377171 chr7 25204083 25207085 + 3.20859420377171 NA intron (NM_207677, intron 4 of 4) intron (NM_207677, intron 4 of 4) 12141 NR_106015 102466794 NR_106015 ENSMUSG00000098325 Mir7048 Gm27274|mmu-mir-7048 microRNA 7048 ncRNA common_peak2_76_667_-0.306982751700986_9.23021291662356_3.20812128132992 chr14 55091277 55092740 + 3.20812128132992 NA promoter-TSS (NM_001039198) promoter-TSS (NM_001039198) 40 NM_001039198 239102 Mm.441113 NM_001039198 ENSMUSG00000040721 Zfhx2 ZFH-5 zinc finger homeobox 2 protein-coding common_peak1_150_1058_0.220033510993215_10.1585036294889_3.20658059719097 chr6 57702423 57704246 + 3.20658059719097 NA intron (NM_133737, intron 1 of 8) CpG 879 NM_133737 71835 Mm.274904 NM_133737 ENSMUSG00000062190 Lancl2 1700003F10Rik LanC (bacterial lantibiotic synthetase component C)-like 2 protein-coding common_peak1_61_526_-0.348364635716552_8.86747683377894_3.20568618500837 chr15 58075522 58076606 + 3.20568618500837 NA intron (NM_009572, intron 1 of 3) CpG 444 NM_001042438 22770 Mm.244931 NM_009572 ENSMUSG00000022361 Zhx1 - zinc fingers and homeoboxes 1 protein-coding common_peak1_53_259_0.426452064997497_8.2355938455272_3.20460406733961 chr13 32337836 32338621 + 3.20460406733961 NA intron (NM_146041, intron 1 of 10) intron (NM_146041, intron 1 of 10) 316 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_45_206_0.47158615778054_7.9292800363896_3.20403841303394 chr14 121933724 121934583 + 3.20403841303394 NA intron (NM_026861, intron 4 of 8) MTD|LTR|ERVL-MaLR -18379 NM_182806 110168 Mm.37405 NM_182806 ENSMUSG00000050350 Gpr18 - G protein-coupled receptor 18 protein-coding common_peak1_45_206_0.47158615778054_7.9292800363896_3.20403841303394-2 chr5 142447729 142448304 + 3.20403841303394 NA intron (NM_199068, intron 2 of 8) RSINE1|SINE|B4 -15915 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding common_peak2_550_5640_0.0974882779248514_12.5104793605673_3.20354518866915 chr15 96637445 96644003 + 3.20354518866915 NA intron (NM_001166458, intron 1 of 15) intron (NM_001166458, intron 1 of 15) 1238 NM_134086 105727 Mm.103568 NM_134086 ENSMUSG00000023169 Slc38a1 AA408026|AA409865|AL022800|AU015942|NAT2 solute carrier family 38, member 1 protein-coding common_peak2_27_98_0.657208129938316_6.95796068504877_3.20247763401147 chr7 119865918 119866647 + 3.20247763401147 NA intron (NM_001163703, intron 1 of 2) intron (NM_001163703, intron 1 of 2) 29176 NM_173408 233805 Mm.31539 NM_173408 ENSMUSG00000048787 Dcun1d3 1700020A13Rik|BC030335 DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) protein-coding unique_peak2_27_98_0.657208129938316_6.95796068504877_3.20247763401147 chr9 53404795 53405710 + 3.20247763401147 NA promoter-TSS (NM_029247) promoter-TSS (NM_029247) -34 NM_029247 75311 Mm.26078 NM_029247 ENSMUSG00000005131 4930550C14Rik AU017961 RIKEN cDNA 4930550C14 gene protein-coding common_peak1_97_872_-0.2663492955324_9.63666319586324_3.20163814137257 chr6 113482293 113483237 + 3.20163814137257 NA promoter-TSS (NM_133930) promoter-TSS (NM_133930) -804 NM_133930 171508 Mm.41593 NM_133930 ENSMUSG00000030284 Creld1 AI843811 cysteine-rich with EGF-like domains 1 protein-coding common_peak1_219_1735_0.172964408314149_10.8480334366016_3.20144791444421 chr11 83568148 83570613 + 3.20144791444421 NA Intergenic Intergenic 9256 NM_011338 20308 Mm.416125 NM_011338 ENSMUSG00000019122 Ccl9 CCF18|MRP-2|Scya10|Scya9 chemokine (C-C motif) ligand 9 protein-coding common_peak2_108_685_0.269677469356823_9.55690350085122_3.20117307010772 chr11 115640737 115643472 + 3.20117307010772 NA Intergenic Intergenic -13809 NM_001252395 67283 Mm.383426 NM_026071 ENSMUSG00000020744 Slc25a19 2900089E13Rik|DNC|MUP1|TPC solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein-coding common_peak1_43_364_-0.425342599887072_8.29908135382384_3.2010272311231-2 chr7 34196003 34196796 + 3.2010272311231 NA exon (NM_026549, exon 2 of 7) exon (NM_026549, exon 2 of 7) 248 NM_026549 68079 Mm.38173 NM_026549 ENSMUSG00000002635 Pdcd2l 6030457N17Rik programmed cell death 2-like protein-coding common_peak2_43_364_-0.425342599887072_8.29908135382384_3.2010272311231 chr15 66475957 66476984 + 3.2010272311231 NA intron (NM_019457, intron 3 of 11) HAL1ME|LINE|L1 24440 NM_019457 54562 Mm.244890 NM_019457 ENSMUSG00000022375 Lrrc6 LRTP leucine rich repeat containing 6 (testis) protein-coding common_peak1_43_364_-0.425342599887072_8.29908135382384_3.2010272311231 chr1 185104966 185105760 + 3.2010272311231 NA Intergenic Intergenic -98805 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding common_peak1_193_1472_0.187408959513917_10.6182461947928_3.20102030964873 chr2 122117648 122119136 + 3.20102030964873 NA promoter-TSS (NM_145531) promoter-TSS (NM_145531) -6 NM_145531 214585 Mm.222303 NM_145531 ENSMUSG00000033396 Spg11 6030465E24Rik|A330015I11|C530005A01Rik spastic paraplegia 11 protein-coding common_peak1_65_563_-0.335619093551557_8.97174180562302_3.2004272371 chr15 43477062 43477909 + 3.2004272371 NA promoter-TSS (NR_046064) promoter-TSS (NR_046064) 256 NM_025736 66736 Mm.244512 NM_025736 ENSMUSG00000022337 Emc2 4921531G14Rik|AV060620|AW209495|Ttc35 ER membrane protein complex subunit 2 protein-coding common_peak1_65_563_-0.335619093551557_8.97174180562302_3.2004272371-2 chr7 139971678 139972365 + 3.2004272371 NA TTS (NM_001033465) TTS (NM_001033465) 6734 NM_001033465 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding common_peak1_194_1907_-0.176796419519331_10.8094472462458_3.19979211686363 chr18 56707760 56709815 + 3.19979211686363 NA intron (NM_010721, intron 1 of 10) CpG 974 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak1_143_1347_-0.212082485750123_10.2905635383068_3.19967400997781 chr5 139252149 139253459 + 3.19967400997781 NA promoter-TSS (NM_001163316) promoter-TSS (NM_001163316) 480 NM_026269 67604 Mm.270137 NM_026269 ENSMUSG00000025858 Get4 1110007L15Rik|AW412535|Cee golgi to ER traffic protein 4 protein-coding common_peak2_64_554_-0.339429440904572_8.94662924078518_3.19954597992509 chr7 46830330 46832995 + 3.19954597992509 NA Intergenic Intergenic -14142 NM_010699 16828 Mm.29324 NM_010699 ENSMUSG00000063229 Ldha Ldh1|Ldhm|l7R2 lactate dehydrogenase A protein-coding common_peak1_20_171_-0.6487901109036_7.1018696992503_3.19951312837833 chr9 33026705 33027199 + 3.19951312837833 NA Intergenic Intergenic -97986 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA unique_peak2_35_294_-0.473273471190181_7.96793440865411_3.1993639387697 chr12 40016552 40017897 + 3.1993639387697 NA Intergenic Intergenic 20152 NM_007487 11861 Mm.12723 NM_007487 ENSMUSG00000047446 Arl4a AI467555|Arl4 ADP-ribosylation factor-like 4A protein-coding common_peak1_35_294_-0.473273471190181_7.96793440865411_3.1993639387697 chr6 86365600 86366337 + 3.1993639387697 NA intron (NM_025591, intron 1 of 2) CpG 285 NM_025591 66488 Mm.422972 NM_025591 ENSMUSG00000057497 Fam136a 2010309E21Rik|AW124904|Hyccin family with sequence similarity 136, member A protein-coding common_peak2_158_1508_-0.199500808930285_10.4596266860615_3.19933011781986 chr7 15945088 15946966 + 3.19933011781986 NA promoter-TSS (NM_133831) promoter-TSS (NM_133831) 81 NM_133831 68077 Mm.277634 NM_133831 ENSMUSG00000041560 Gltscr2 5330430H08Rik|9430097C02Rik|AU041936|AW536441|PICT-1|R74911 glioma tumor suppressor candidate region gene 2 protein-coding common_peak1_110_1003_-0.247625386586076_9.84773086065773_3.19930619554748 chr6 83108513 83110029 + 3.19930619554748 NA TTS (NM_001081266) TTS (NM_001081266) 163 NM_026744 68499 Mm.333183 NM_026744 ENSMUSG00000030037 Mrpl53 1110007K17Rik mitochondrial ribosomal protein L53 protein-coding common_peak2_87_773_-0.283167391077747_9.45460606060554_3.19817894638707 chr3 90230676 90232471 + 3.19817894638707 NA promoter-TSS (NM_206924) promoter-TSS (NM_206924) -24 NM_206924 23922 Mm.13912 NM_206924 ENSMUSG00000027937 Jtb Gm622 jumping translocation breakpoint protein-coding unique_peak2_54_266_0.420595086698361_8.27099347503674_3.19773272157826 chr8 122295061 122297269 + 3.19773272157826 NA intron (NM_009569, intron 1 of 9) intron (NM_009569, intron 1 of 9) 14024 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_83_481_0.31780992994125_9.07179430120059_3.19692855981539 chr1 138186208 138187439 + 3.19692855981539 NA Intergenic Intergenic -11518 NM_001268286 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak2_44_372_-0.416853182690605_8.33460522890993_3.19587996442245 chr12 69573915 69575070 + 3.19587996442245 NA Intergenic Intergenic 8536 NM_001033236 207965 Mm.102487 NM_001033236 ENSMUSG00000049882 Vcpkmt Gm71|Mettl21d|Mettl221d|VCP-KMT valosin containing protein lysine (K) methyltransferase protein-coding common_peak2_120_1105_-0.23456882559926_9.99385125743508_3.19504698339774 chr12 72663353 72665713 + 3.19504698339774 NA intron (NM_025522, intron 1 of 6) intron (NM_025522, intron 1 of 6) 295 NM_025522 66375 Mm.289653 NM_025522 ENSMUSG00000021094 Dhrs7 2310016E22Rik|5730564L20Rik|AW061210|Retdsr4|Retsdr4 dehydrogenase/reductase (SDR family) member 7 protein-coding common_peak2_255_2113_0.15694284648791_11.1242310846266_3.19465549527327 chr7 120849144 120853332 + 3.19465549527327 NA promoter-TSS (NM_001267711) promoter-TSS (NM_001267711) 49 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak2_82_473_0.32076262027009_9.0491245590333_3.1944130466416 chr2 31151602 31153012 + 3.1944130466416 NA promoter-TSS (NM_178760) promoter-TSS (NM_178760) -9 NM_178760 277463 Mm.236074 NM_178760 ENSMUSG00000000194 Gpr107 9930033D15Rik|AI790205|C530034M11|mKIAA1624 G protein-coupled receptor 107 protein-coding common_peak1_36_150_0.541378911886332_7.50909419526824_3.19416912578643-2 chr4 116149898 116150635 + 3.19416912578643 NA promoter-TSS (NM_029786) promoter-TSS (NM_029786) -252 NM_029786 68273 Mm.196045 NM_026651 ENSMUSG00000028700 Pomgnt1 0610016I07Rik|4930467B06Rik protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase protein-coding common_peak1_36_150_0.541378911886332_7.50909419526824_3.19416912578643 chr19 6334961 6335435 + 3.19416912578643 NA 5' UTR (NM_001168490, exon 1 of 8) 5' UTR (NM_001168490, exon 1 of 8) 159 NM_008583 17283 Mm.12917 NM_008583 ENSMUSG00000024947 Men1 AW045611 multiple endocrine neoplasia 1 protein-coding common_peak1_128_859_0.241668836817773_9.86902726799835_3.19404205000707 chr4 44233509 44235077 + 3.19404205000707 NA Intergenic Intergenic -13026 NR_039565 100628618 NR_039565 ENSMUSG00000092677 Mir5106 mir-5106|mmu-mir-5106|mu-mir-5106 microRNA 5106 ncRNA unique_peak2_7_71_-1.1002840495035_5.61978297669056_3.19392907652953-3 chrX 50566515 50567025 + 3.19392907652953 NA intron (NR_015505, intron 19 of 19) intron (NR_015505, intron 19 of 19) 29381 NR_131207 102639259 Mm.350898 NR_131207 Gm35612 - predicted gene, 35612 ncRNA unique_peak2_7_71_-1.1002840495035_5.61978297669056_3.19392907652953-4 chrX 75745903 75746429 + 3.19392907652953 NA intron (NR_029443, intron 5 of 8) intron (NR_029443, intron 5 of 8) 18533 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA unique_peak2_7_71_-1.1002840495035_5.61978297669056_3.19392907652953-2 chr4 153489907 153490556 + 3.19392907652953 NA Intergenic B3|SINE|B2 -7401 NM_001099299 230959 Mm.318874 NM_001099299 ENSMUSG00000039546 Ajap1 Gm573 adherens junction associated protein 1 protein-coding unique_peak2_7_71_-1.1002840495035_5.61978297669056_3.19392907652953 chr10 93225338 93225913 + 3.19392907652953 NA intron (NM_146239, intron 7 of 16) Lx7|LINE|L1 62840 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak2_272_2296_0.150944417495406_11.2410073501256_3.19329022664147 chr9 107769723 107771961 + 3.19329022664147 NA intron (NM_148930, intron 1 of 24) CpG 160 NM_148930 83486 Mm.259197 NM_148930 ENSMUSG00000032580 Rbm5 D030069N10Rik RNA binding motif protein 5 protein-coding common_peak1_186_1403_0.191590453797463_10.5511224472033_3.19268313790129 chr1 171058396 171060320 + 3.19268313790129 NA promoter-TSS (NM_010188) promoter-TSS (NM_010188) 45 NM_010188 14131 Mm.22119 NM_010188 ENSMUSG00000059498 Fcgr3 CD16 Fc receptor, IgG, low affinity III protein-coding common_peak1_22_187_-0.616128047584128_7.24652482788557_3.19091269224483 chr2 172345468 172346017 + 3.19091269224483 NA exon (NM_025912, exon 1 of 3) exon (NM_025912, exon 1 of 3) 165 NM_025912 67017 Mm.30013 NM_025912 ENSMUSG00000027495 Fam210b 2010011I20Rik|AI430961|AV108736 family with sequence similarity 210, member B protein-coding common_peak1_22_187_-0.616128047584128_7.24652482788557_3.19091269224483-2 chr8 26976459 26976980 + 3.19091269224483 NA promoter-TSS (NM_001101502) promoter-TSS (NM_001101502) -617 NM_001101502 353310 Mm.212469 NM_001101502 ENSMUSG00000085795 Zfp703 1110032O19Rik|AI430822|AL022941|Csmn1|End2|Zeppo1|Znf703|Zpo1 zinc finger protein 703 protein-coding common_peak1_39_329_-0.448575675428684_8.14203437653147_3.19070870422394 chr17 83730370 83730988 + 3.19070870422394 NA intron (NM_001171052, intron 3 of 15) Lx8|LINE|L1 24516 NM_001171052 116871 Mm.277668 NM_054082 ENSMUSG00000055817 Mta3 1110002J22Rik|mKIAA1266 metastasis associated 3 protein-coding common_peak1_17_147_-0.704768003756283_6.85706936375081_3.18926809344296 chr18 42274879 42275187 + 3.18926809344296 NA promoter-TSS (NM_172626) promoter-TSS (NM_172626) 164 NR_033452 100042757 Mm.100172 NR_033452 Gm4013 - predicted gene 4013 ncRNA common_peak2_17_147_-0.704768003756283_6.85706936375081_3.18926809344296 chr2 29802559 29803222 + 3.18926809344296 NA 5' UTR (NM_011989, exon 1 of 13) 5' UTR (NM_011989, exon 1 of 13) 210 NM_011989 26569 Mm.330113 NM_011989 ENSMUSG00000059316 Slc27a4 BB144259|FATP4 solute carrier family 27 (fatty acid transporter), member 4 protein-coding unique_peak2_17_147_-0.704768003756283_6.85706936375081_3.18926809344296 chr13 13528660 13529969 + 3.18926809344296 NA Intergenic Intergenic -61095 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding common_peak1_245_2496_-0.153790013523146_11.2090850991666_3.18795076017021 chr6 42348898 42351239 + 3.18795076017021 NA 5' UTR (NM_001289617, exon 1 of 11) 5' UTR (NM_001289617, exon 1 of 11) 240 NM_001289619 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak2_46_213_0.461664101024871_7.97229903691358_3.18785219874456 chr8 77610077 77611270 + 3.18785219874456 NA promoter-TSS (NM_145599) promoter-TSS (NM_145599) -20 NM_145599 234463 Mm.273578 NM_145599 ENSMUSG00000031617 Tmem184c 8430433H16Rik|AI645453|AL033298|BC004056|Tmem34 transmembrane protein 184C protein-coding common_peak1_33_132_0.574866136659337_7.34271550383086_3.18679499603026 chr4 47352382 47353101 + 3.18679499603026 NA promoter-TSS (NM_009370) promoter-TSS (NM_009370) -481 NM_001312868 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding unique_peak2_33_132_0.574866136659337_7.34271550383086_3.18679499603026 chr5 38879417 38880638 + 3.18679499603026 NA Intergenic Intergenic -3334 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak2_33_132_0.574866136659337_7.34271550383086_3.18679499603026 chr1 36913256 36914360 + 3.18679499603026 NA intron (NM_018872, intron 1 of 40) intron (NM_018872, intron 1 of 40) 25719 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding common_peak2_33_132_0.574866136659337_7.34271550383086_3.18679499603026-2 chr11 106694719 106695614 + 3.18679499603026 NA intron (NM_001305158, intron 4 of 14) B3|SINE|B2 20115 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding unique_peak2_21_67_0.772334901443612_6.47363029197215_3.18510831278183 chr1 120258341 120259076 + 3.18510831278183 NA intron (NM_001085409, intron 2 of 5) intron (NM_001085409, intron 2 of 5) 6572 NM_133186 68428 Mm.181033 NM_133186 ENSMUSG00000026389 Steap3 1010001D01Rik|Tsap6|pHyde STEAP family member 3 protein-coding common_peak1_21_67_0.772334901443612_6.47363029197215_3.18510831278183-2 chr17 11539431 11540034 + 3.18510831278183 NA intron (NM_016694, intron 6 of 11) B3A|SINE|B2 343457 NR_045808 52027 Mm.442257 NR_045808 D17Ertd648e - DNA segment, Chr 17, ERATO Doi 648, expressed ncRNA common_peak1_21_67_0.772334901443612_6.47363029197215_3.18510831278183-3 chrX 160994144 160994563 + 3.18510831278183 NA intron (NM_001024624, intron 1 of 18) CpG 328 NM_001024624 382253 Mm.443717 NM_001024624 ENSMUSG00000031292 Cdkl5 BC038161|Stk9 cyclin-dependent kinase-like 5 protein-coding common_peak1_21_67_0.772334901443612_6.47363029197215_3.18510831278183 chr11 86811003 86811545 + 3.18510831278183 NA intron (NR_106195, intron 2 of 8) intron (NR_106195, intron 2 of 8) -3614 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding common_peak1_13_116_-0.810412280751835_6.46515857920749_3.1851083127818 chr17 34630878 34631218 + 3.1851083127818 NA exon (NM_030890, exon 2 of 4) exon (NM_030890, exon 2 of 4) 1362 NM_030890 260297 Mm.390965 NM_030890 ENSMUSG00000015476 Prrt1 Bat-4|Bat4|D17H6S54E|DSPD1|G5b|NG5|ORF31 proline-rich transmembrane protein 1 protein-coding common_peak2_79_450_0.327375226748108_8.98067123662943_3.18322956666844 chr12 104213469 104215396 + 3.18322956666844 NA promoter-TSS (NM_001168295) promoter-TSS (NM_001168295) -112 NM_001168294 238393 Mm.483584 NM_001033335 ENSMUSG00000066363 Serpina3f 2A1|BC049975 serine (or cysteine) peptidase inhibitor, clade A, member 3F protein-coding common_peak2_189_1850_-0.179007078409006_10.7645856406661_3.18309833658533 chr10 80661405 80666783 + 3.18309833658533 NA Intergenic Intergenic -7023 NM_145361 208198 Mm.60720 NM_145361 ENSMUSG00000003344 Btbd2 2610037C03Rik|4930512K17Rik BTB (POZ) domain containing 2 protein-coding common_peak2_113_1033_-0.242909439578403_9.89256575052573_3.18308434038015 chr14 31640104 31642094 + 3.18308434038015 NA promoter-TSS (NM_019975) promoter-TSS (NM_019975) 42 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding common_peak1_45_381_-0.412355712755883_8.37125097165781_3.1829102606059 chr3 41563274 41563999 + 3.1829102606059 NA promoter-TSS (NM_001130185) promoter-TSS (NM_001130185) -115 NM_001130185 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding common_peak1_57_287_0.405350624256613_8.37260031357062_3.1829102606059 chr15 59759947 59760872 + 3.1829102606059 NA Intergenic Intergenic 34550 NR_045076 100503021 Mm.402924 NR_045076 Gm19510 - predicted gene, 19510 ncRNA common_peak2_57_287_0.405350624256613_8.37260031357062_3.1829102606059 chr9 78395567 78396545 + 3.1829102606059 NA exon (NM_001191044, exon 1 of 17) exon (NM_001191044, exon 1 of 17) 279 NM_001191044 100048658 Mm.158166 NM_001191044 ENSMUSG00000070291 Ddx43 ENSMUSG00000070291|OTTMUSG00000019690 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 protein-coding common_peak2_203_1573_0.180675573992682_10.7105576125038_3.18276602804726 chr19 53943236 53944794 + 3.18276602804726 NA promoter-TSS (NM_001168505) promoter-TSS (NM_001168505) -291 NM_001168505 56392 Mm.228669 NM_019658 ENSMUSG00000024976 Shoc2 AU017287|Sur8|mKIAA0862 soc-2 (suppressor of clear) homolog (C. elegans) protein-coding common_peak1_23_77_0.728373249229846_6.64958884347717_3.1824201732827-4 chr8 4166519 4167018 + 3.1824201732827 NA intron (NM_001039578, intron 1 of 10) CpG 201 NM_001039578 213027 Mm.437106 NM_153536 ENSMUSG00000011832 Evi5l 1700084G18Rik|2310039H16Rik|3110007G05Rik|B130050I23Rik ecotropic viral integration site 5 like protein-coding common_peak1_23_77_0.728373249229846_6.64958884347717_3.1824201732827-2 chr5 36357693 36358166 + 3.1824201732827 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 40210 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak1_23_77_0.728373249229846_6.64958884347717_3.1824201732827 chr15 78931148 78931723 + 3.1824201732827 NA TTS (NM_008495) TTS (NM_008495) -3498 NM_133800 97961 Mm.157216 NM_133800 ENSMUSG00000033099 Nol12 C78541|Nop25 nucleolar protein 12 protein-coding common_peak1_23_77_0.728373249229846_6.64958884347717_3.1824201732827-3 chr6 48690599 48691147 + 3.1824201732827 NA exon (NM_001243199, exon 3 of 4) exon (NM_001243199, exon 3 of 4) 6295 NM_174990 107526 Mm.333048 NM_174990 ENSMUSG00000054435 Gimap4 AU019574|E430007K16Rik|Ian-1|Ian1|Imap4 GTPase, IMAP family member 4 protein-coding common_peak1_192_1884_-0.177543515709768_10.7915770503011_3.18236486143145 chr2 128391694 128394299 + 3.18236486143145 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 36355 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_93_832_-0.272429286753173_9.56595804198896_3.18206247344054 chr7 16614107 16615703 + 3.18206247344054 NA promoter-TSS (NM_172739) promoter-TSS (NM_172739) 88 NM_172739 232906 Mm.28646 NM_172739 ENSMUSG00000058230 Arhgap35 6430596G11Rik|AI841135|Grlf1|mKIAA1722|p190A|p190RhoGAP Rho GTPase activating protein 35 protein-coding common_peak1_93_832_-0.272429286753173_9.56595804198896_3.18206247344054 chr1 13592852 13594220 + 3.18206247344054 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -3626 NM_028173 72265 Mm.28765 NM_028173 ENSMUSG00000025935 Tram1 1810049E02Rik|TRAMP translocating chain-associating membrane protein 1 protein-coding common_peak1_78_442_0.330936202558298_8.95663098983417_3.18205969028999 chr1 58721783 58723056 + 3.18205969028999 NA intron (NM_207653, intron 1 of 9) intron (NM_207653, intron 1 of 9) -8133 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak1_78_442_0.330936202558298_8.95663098983417_3.18205969028999-2 chr11 34777294 34778360 + 3.18205969028999 NA intron (NM_033374, intron 1 of 51) intron (NM_033374, intron 1 of 51) 6078 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding unique_peak2_40_337_-0.439436171216758_8.1811613506738_3.18151848863517 chr19 21862368 21864430 + 3.18151848863517 NA Intergenic Intergenic 85059 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_30_115_0.608701209606735_7.16233159993094_3.18151589331345 chr10 80028935 80029392 + 3.18151589331345 NA exon (NM_027521, exon 20 of 22) exon (NM_027521, exon 20 of 22) 9488 NM_027521 70719 Mm.243954 NM_027521 ENSMUSG00000035697 Hmha1 6330406L22Rik|AW539505|Ha-1 histocompatibility (minor) HA-1 protein-coding common_peak2_30_115_0.608701209606735_7.16233159993094_3.18151589331345 chr9 41141332 41142024 + 3.18151589331345 NA intron (NM_176860, intron 1 of 13) B1_Mur4|SINE|Alu 15816 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding unique_peak2_9_85_-0.961742838257678_5.94539333557326_3.18035325882156-2 chr2 92484616 92485427 + 3.18035325882156 NA Intergenic Intergenic -24503 NM_145832 228368 Mm.273990 NM_145832 ENSMUSG00000049922 Slc35c1 E430007K15Rik|fuct1 solute carrier family 35, member C1 protein-coding unique_peak2_9_85_-0.961742838257678_5.94539333557326_3.18035325882156 chr17 12686808 12687522 + 3.18035325882156 NA intron (NM_010515, intron 44 of 47) intron (NM_010515, intron 44 of 47) -11327 NM_009202 20517 Mm.594 NM_009202 ENSMUSG00000023829 Slc22a1 Lx1|Oct1|Orct|Orct1 solute carrier family 22 (organic cation transporter), member 1 protein-coding unique_peak1_16_44_0.911683164644497_5.94769467865192_3.18035325882156 chr19 46983996 46984367 + 3.18035325882156 NA intron (NM_001164363, intron 1 of 17) intron (NM_001164363, intron 1 of 17) -14614 NM_001164365 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak1_16_44_0.911683164644497_5.94769467865192_3.18035325882156 chr5 65475536 65475920 + 3.18035325882156 NA intron (NM_133697, intron 1 of 4) intron (NM_133697, intron 1 of 4) 17107 NM_133697 68552 Mm.10709 NM_133697 ENSMUSG00000037822 Smim14 1110003E01Rik|1700127H04Rik|5430439C17Rik|MAd4 small integral membrane protein 14 protein-coding unique_peak2_9_85_-0.961742838257678_5.94539333557326_3.18035325882156-3 chr4 119806764 119807421 + 3.18035325882156 NA Intergenic B4|SINE|B4 -7586 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding unique_peak2_9_85_-0.961742838257678_5.94539333557326_3.18035325882156-4 chr7 128059069 128059595 + 3.18035325882156 NA Intergenic MTC|LTR|ERVL-MaLR -3308 NM_001082960 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak2_148_1399_-0.206286109724708_10.34806805697_3.17958585607217 chr9 96712624 96715651 + 3.17958585607217 NA intron (NM_175537, intron 2 of 2) intron (NM_175537, intron 2 of 2) 17538 NM_175537 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak2_259_2661_-0.148155713206283_11.3042169993087_3.17932623073578 chr17 36030962 36033440 + 3.17932623073578 NA exon (NM_010398, exon 2 of 7) exon (NM_010398, exon 2 of 7) 500 NM_010398 15040 Mm.439648 NM_010398 ENSMUSG00000067212 H2-T23 37b|37c|H-2T23|H2-Qa1|Qa-1|Qa-1(b)|Qa1|Qed-1|T18c|T18c(37)|T23b|T23d histocompatibility 2, T region locus 23 protein-coding unique_peak2_11_100_-0.871048325846055_6.22268731982877_3.17921402936932-2 chr8 120588539 120589109 + 3.17921402936932 NA exon (NM_178856, exon 2 of 5) exon (NM_178856, exon 2 of 5) 251 NM_178856 272551 Mm.275910 NM_178856 ENSMUSG00000031821 Gins2 2210013I18Rik|4833427B12Rik|AI323585|Pfs2 GINS complex subunit 2 (Psf2 homolog) protein-coding unique_peak2_11_100_-0.871048325846055_6.22268731982877_3.17921402936932 chr7 30908664 30909404 + 3.17921402936932 NA exon (NM_010758, exon 6 of 13) exon (NM_010758, exon 6 of 13) 5798 NM_010758 17136 Mm.241355 NM_010758 ENSMUSG00000036634 Mag Gma|siglec-4a myelin-associated glycoprotein protein-coding common_peak1_11_100_-0.871048325846055_6.22268731982877_3.17921402936932 chr18 10533263 10533575 + 3.17921402936932 NA intron (NM_001083628, intron 19 of 32) intron (NM_001083628, intron 19 of 32) 76933 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding common_peak1_90_537_0.300882680163424_9.22190370263834_3.17919028831771 chr2 32961750 32963086 + 3.17919028831771 NA promoter-TSS (NR_002898) promoter-TSS (NR_002898) 706 NM_009076 269261 Mm.250030 NM_009076 ENSMUSG00000038900 Rpl12 E430018F03 ribosomal protein L12 protein-coding common_peak1_41_181_0.496292314786158_7.75594079759178_3.17914244315717 chr11 88187659 88188482 + 3.17914244315717 NA exon (NM_001172099, exon 7 of 10) exon (NM_001172099, exon 7 of 10) -6036 NM_001291270 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding common_peak2_81_714_-0.29374385541397_9.33492750395877_3.17907602348917 chr6 71979319 71982025 + 3.17907602348917 NA Intergenic Intergenic 61856 NR_046180 330350 Mm.246787 NR_046180 ENSMUSG00000108356 9130221F21Rik 9130221F21 RIKEN cDNA 9130221F21 gene ncRNA common_peak2_159_1518_-0.19793499331224_10.469938657846_3.17890203033064 chr12 113154278 113156172 + 3.17890203033064 NA Intergenic Intergenic -1196 NM_134041 104732 Mm.87616 NM_134041 ENSMUSG00000037466 4930427A07Rik AA536649|mFLJ00116 RIKEN cDNA 4930427A07 gene protein-coding common_peak1_98_602_0.28544027191408_9.37873432785712_3.17872465322727 chr11 67051898 67053082 + 3.17872465322727 NA promoter-TSS (NM_001040026) promoter-TSS (NM_001040026) 128 NM_025510 66358 Mm.22511 NM_025510 ENSMUSG00000020910 Adprm 2310004I24Rik|MDS006 ADP-ribose/CDP-alcohol diphosphatase, manganese dependent protein-coding unique_peak2_8_78_-1.02570769749079_5.79092689943171_3.17869234793979-2 chrX 159056006 159056700 + 3.17869234793979 NA Intergenic Tigger12c|DNA|TcMar-Tigger -199429 NM_148945 110651 Mm.328476 NM_148945 ENSMUSG00000031309 Rps6ka3 MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2 ribosomal protein S6 kinase polypeptide 3 protein-coding common_peak2_8_78_-1.02570769749079_5.79092689943171_3.17869234793979 chr1 172205316 172205911 + 3.17869234793979 NA intron (NM_011063, intron 1 of 3) intron (NM_011063, intron 1 of 3) 1168 NM_011063 18611 Mm.544 NM_011063 ENSMUSG00000013698 Pea15a Mat1|PEA-15|Pea15|Pkcs15 phosphoprotein enriched in astrocytes 15A protein-coding unique_peak2_8_78_-1.02570769749079_5.79092689943171_3.17869234793979 chr11 90833784 90834333 + 3.17869234793979 NA intron (NR_045956, intron 2 of 2) IAPEz-int|LTR|ERVK 29367 NR_045956 73922 Mm.233289 NR_045956 ENSMUSG00000085940 4930405D11Rik - RIKEN cDNA 4930405D11 gene ncRNA common_peak1_112_1022_-0.243070931572928_9.87705496395887_3.17866650109061 chr17 23563693 23564973 + 3.17866650109061 NA promoter-TSS (NM_001033496) promoter-TSS (NM_001033496) -107 NM_001033496 449521 Mm.268582 NM_001033496 ENSMUSG00000071256 Zfp213 BC038178|D17Ertd197e zinc finger protein 213 protein-coding common_peak1_399_3753_0.118251502050935_11.9333386858563_3.17801621416429 chr4 133658811 133662540 + 3.17801621416429 NA TTS (NM_001145956) TTS (NM_001145956) 11972 NM_001145955 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak2_179_1738_-0.184638957369243_10.671722738622_3.17771650054899 chr12 83687588 83690068 + 3.17771650054899 NA 5' UTR (NM_008943, exon 1 of 12) 5' UTR (NM_008943, exon 1 of 12) 265 NM_008943 19164 Mm.998 NM_008943 ENSMUSG00000019969 Psen1 Ad3h|PS-1|PS1|S182 presenilin 1 protein-coding common_peak1_19_162_-0.657593926600301_7.01993119093093_3.17748875390382-2 chr6 48697433 48697927 + 3.17748875390382 NA Intergenic Intergenic 10564 NM_153175 231931 Mm.321047 NM_153175 ENSMUSG00000047867 Gimap6 4833419H03Rik|Ian6|mFLJ00102 GTPase, IMAP family member 6 protein-coding common_peak1_19_162_-0.657593926600301_7.01993119093093_3.17748875390382-3 chr7 44744828 44745284 + 3.17748875390382 NA intron (NM_178734, intron 1 of 4) intron (NM_178734, intron 1 of 4) 3293 NM_001289836 243963 Mm.382935 NM_178734 ENSMUSG00000048012 Zfp473 D030014N22Rik|Znf473|zfp-100 zinc finger protein 473 protein-coding common_peak1_19_162_-0.657593926600301_7.01993119093093_3.17748875390382-4 chr7 47022754 47023271 + 3.17748875390382 NA Intergenic RMER5|LTR|ERV1 -14598 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding common_peak1_19_162_-0.657593926600301_7.01993119093093_3.17748875390382 chr1 171845747 171846189 + 3.17748875390382 NA intron (NM_001289470, intron 2 of 8) intron (NM_001289470, intron 2 of 8) 6271 NM_013489 12523 Mm.259115 NM_013489 ENSMUSG00000038147 Cd84 A130013D22Rik|CDw84|SLAMF5 CD84 antigen protein-coding unique_peak2_12_108_-0.839375391322349_6.34849662911575_3.17713171141333 chr1 167009053 167009943 + 3.17713171141333 NA intron (NM_175461, intron 1 of 2) intron (NM_175461, intron 1 of 2) 8081 NM_001160261 226610 Mm.389217 NM_175461 ENSMUSG00000060568 Fam78b C030014K22Rik|C030020L09Rik family with sequence similarity 78, member B protein-coding unique_peak2_12_108_-0.839375391322349_6.34849662911575_3.17713171141333-2 chr12 31391712 31392442 + 3.17713171141333 NA Intergenic Intergenic -40606 NM_007861 13382 Mm.3131 NM_007861 ENSMUSG00000020664 Dld - dihydrolipoamide dehydrogenase protein-coding unique_peak2_12_108_-0.839375391322349_6.34849662911575_3.17713171141333-3 chr15 93251790 93252677 + 3.17713171141333 NA intron (NM_001033275, intron 4 of 7) MT2B1|LTR|ERVL 22851 NM_001033275 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding unique_peak2_12_108_-0.839375391322349_6.34849662911575_3.17713171141333-4 chr2 168556188 168557161 + 3.17713171141333 NA intron (NR_111897, intron 2 of 5) intron (NR_111897, intron 2 of 5) 33691 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding unique_peak2_12_108_-0.839375391322349_6.34849662911575_3.17713171141333-5 chr3 95373957 95374881 + 3.17713171141333 NA Intergenic Intergenic -17217 NM_001163642 84505 Mm.490259 NM_018877 ENSMUSG00000015697 Setdb1 AU022152|ESET|KMT1E|mKIAA0067 SET domain, bifurcated 1 protein-coding common_peak1_37_156_0.532355765691619_7.56079863173744_3.17569483112117 chr11 79305995 79306907 + 3.17569483112117 NA Intergenic PB1D10|SINE|Alu -33441 NM_010897 18015 Mm.255596 NM_010897 ENSMUSG00000020716 Nf1 AW494271|Dsk9|E030030H24Rik|Mhdadsk9|Nf-1 neurofibromin 1 protein-coding unique_peak2_27_227_-0.546325264146816_7.55972738209133_3.17569483112117 chr8 15055288 15056677 + 3.17569483112117 NA Intergenic ORR1A2|LTR|ERVL-MaLR -1671 NM_008664 17930 Mm.272115 NM_008664 ENSMUSG00000031461 Myom2 AW146149 myomesin 2 protein-coding common_peak1_37_156_0.532355765691619_7.56079863173744_3.17569483112117-2 chr3 129601763 129602692 + 3.17569483112117 NA intron (NM_130450, intron 2 of 4) intron (NM_130450, intron 2 of 4) 69841 NM_130450 170439 Mm.314113 NM_130450 ENSMUSG00000041220 Elovl6 C77826|FAE|LCE ELOVL family member 6, elongation of long chain fatty acids (yeast) protein-coding common_peak1_99_891_-0.26166008541121_9.6700698572147_3.17483856030369 chr10 128743429 128744577 + 3.17483856030369 NA promoter-TSS (NM_016811) promoter-TSS (NM_016811) 53 NM_016811 13139 Mm.291235 NM_016811 ENSMUSG00000025357 Dgka 80kDa|AW146112|Dagk1 diacylglycerol kinase, alpha protein-coding common_peak2_130_877_0.239010132311515_9.89758219569111_3.17402402460667 chr18 67204628 67206551 + 3.17402402460667 NA exon (NM_024190, exon 1 of 1) exon (NM_024190, exon 1 of 1) 230 NM_024190 67064 Mm.73777 NM_024190 ENSMUSG00000109901 Chmp1b 2810405I11Rik|Chmp1b1 charged multivesicular body protein 1B protein-coding common_peak1_117_1074_-0.237982228248642_9.9511298303525_3.17371322378991 chr5 24265754 24266941 + 3.17371322378991 NA Intergenic Intergenic 8819 NR_030454 735274 NR_030454 ENSMUSG00000106252 Mir684-1 Mirn684-1 microRNA 684-1 ncRNA common_peak1_202_1563_0.181174626470685_10.7016121105427_3.17349039754415 chr1 21369693 21372990 + 3.17349039754415 NA Intergenic B1_Mm|SINE|Alu 3010 NM_001033904 433278 Mm.26006 NM_001033904 ENSMUSG00000041722 Khdc1c Khdc1b KH domain containing 1C protein-coding common_peak1_184_1384_0.19221897715318_10.5317797495131_3.17337480632714 chr10 9900159 9902044 + 3.17337480632714 NA promoter-TSS (NM_001081344) promoter-TSS (NM_001081344) -61 NM_001081344 78808 Mm.331751 NM_030191 ENSMUSG00000019790 Stxbp5 0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006 syntaxin binding protein 5 (tomosyn) protein-coding common_peak2_91_812_-0.275426115608804_9.52939848427063_3.17328179759267 chr9 72274344 72275941 + 3.17328179759267 NA intron (NM_001311105, intron 1 of 20) CpG 254 NM_001311105 235469 Mm.242791 NM_146224 ENSMUSG00000038535 Zfp280d A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d zinc finger protein 280D protein-coding common_peak1_97_594_0.286742689901734_9.36011720314617_3.17217002749385 chr10 127654407 127655525 + 3.17217002749385 NA exon (NM_009284, exon 12 of 22) exon (NM_009284, exon 12 of 22) 11737 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding unique_peak2_25_88_0.679687813674534_6.81557733780367_3.17212014567702 chr5 143499694 143500500 + 3.17212014567702 NA intron (NM_144915, intron 11 of 14) B1F|SINE|Alu 27896 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e RAS-related C3 botulinum substrate 1 protein-coding common_peak1_25_88_0.679687813674534_6.81557733780367_3.17212014567702-3 chr19 14351104 14351723 + 3.17212014567702 NA Intergenic ORR1F|LTR|ERVL-MaLR 87093 NR_003027 19862 NR_003027 ENSMUSG00000095132 Rnu6 - U6 small nuclear RNA snRNA common_peak1_25_88_0.679687813674534_6.81557733780367_3.17212014567702-2 chr17 50158505 50159071 + 3.17212014567702 NA intron (NM_181397, intron 2 of 9) intron (NM_181397, intron 2 of 9) 31709 NM_181397 76438 Mm.41854 NM_181397 ENSMUSG00000039316 Rftn1 2310015N21Rik|AI853526 raftlin lipid raft linker 1 protein-coding common_peak2_25_88_0.679687813674534_6.81557733780367_3.17212014567702 chr8 69584599 69585252 + 3.17212014567702 NA Intergenic CpG 40250 NM_001045553 234362 Mm.458487 NM_172754 ENSMUSG00000060427 Zfp868 AI449175|AW108241|C530032E20|mszf62 zinc finger protein 868 protein-coding common_peak1_25_88_0.679687813674534_6.81557733780367_3.17212014567702-4 chr6 90755116 90755744 + 3.17212014567702 NA intron (NM_001134384, intron 1 of 13) intron (NM_001134384, intron 1 of 13) -38901 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_25_88_0.679687813674534_6.81557733780367_3.17212014567702 chr1 160047476 160048270 + 3.17212014567702 NA intron (NM_001162896, intron 1 of 2) MIR3|SINE|MIR 3493 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding common_peak1_193_1473_0.186429865454695_10.6187357418224_3.17186398956566 chr1 152007372 152010401 + 3.17186398956566 NA intron (NM_197990, intron 1 of 5) intron (NM_197990, intron 1 of 5) 81434 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak2_147_1388_-0.206822610397268_10.3364195787828_3.17181037754493 chr11 59417255 59422663 + 3.17181037754493 NA intron (NM_144521, intron 4 of 4) intron (NM_144521, intron 4 of 4) 29997 NM_144521 67826 Mm.26680 NM_144521 ENSMUSG00000009894 Snap47 1110031B06Rik|SNAP-47 synaptosomal-associated protein, 47 protein-coding common_peak2_48_226_0.45032774961977_8.0517123621008_3.17141273217037 chr10 21076738 21077885 + 3.17141273217037 NA intron (NM_001177776, intron 6 of 6) intron (NM_001177776, intron 6 of 6) 36491 NM_001177776 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak2_48_226_0.45032774961977_8.0517123621008_3.17141273217037-2 chr11 88973705 88974610 + 3.17141273217037 NA exon (NM_016706, exon 1 of 7) exon (NM_016706, exon 1 of 7) 222 NM_016706 12812 Mm.268004 NM_016706 ENSMUSG00000033983 Coil C79982|Cln80|p80|p80-coilin coilin protein-coding common_peak2_58_295_0.396073039412876_8.40748988533539_3.17122700707244 chr5 20938139 20939641 + 3.17122700707244 NA intron (NM_001080977, intron 1 of 7) intron (NM_001080977, intron 1 of 7) -12099 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak1_46_390_-0.407893709881336_8.40707794236669_3.17122700707244 chr10 93082956 93083459 + 3.17122700707244 NA Intergenic Intergenic -77669 NM_146239 237459 Mm.217404 NM_146239 ENSMUSG00000020015 Cdk17 6430598J10Rik|Pctk2 cyclin-dependent kinase 17 protein-coding common_peak1_232_1871_0.165746841290444_10.9532381402286_3.17026660040446 chr6 125008400 125010574 + 3.17026660040446 NA promoter-TSS (NM_175557) promoter-TSS (NM_175557) -182 NM_175557 269800 Mm.108677 NM_175557 ENSMUSG00000038346 Zfp384 BB163993|C130073D16Rik|Ciz|NP|Nmp4 zinc finger protein 384 protein-coding common_peak1_143_1346_-0.211011840030567_10.290028215447_3.16919788938733 chr2 65340857 65342754 + 3.16919788938733 NA intron (NM_177074, intron 7 of 11) intron (NM_177074, intron 7 of 11) 22221 NM_177074 320106 Mm.227703 NM_177074 ENSMUSG00000061171 Slc38a11 9330158F14Rik solute carrier family 38, member 11 protein-coding common_peak1_116_1063_-0.238204469740044_9.93618020063117_3.16870851849199 chr4 88721532 88722694 + 3.16870851849199 NA 5' UTR (NM_172871, exon 1 of 1) 5' UTR (NM_172871, exon 1 of 1) 395 NM_172871 242521 Mm.260601 NM_172871 ENSMUSG00000070923 Klhl9 8030469P05|C530050O22Rik|ENSMUSG00000070923|mKIAA1354 kelch-like 9 protein-coding common_peak2_237_1923_0.163791597655957_10.991788882598_3.16862340350189 chr4 101172301 101177700 + 3.16862340350189 NA intron (NM_146145, intron 9 of 24) intron (NM_146145, intron 9 of 24) 90282 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_178_1727_-0.1853429167407_10.6622160437931_3.16855540304042 chr6 120036952 120038724 + 3.16855540304042 NA 5' UTR (NM_001185020, exon 1 of 26) 5' UTR (NM_001185020, exon 1 of 26) 817 NM_001199083 232341 Mm.333349 NM_198703 ENSMUSG00000045962 Wnk1 6430573H23Rik|EG406236|Hsn2|Prkwnk1|mKIAA0344 WNK lysine deficient protein kinase 1 protein-coding common_peak2_120_789_0.250858001570982_9.75113784384996_3.16828704402386 chr5 140572467 140576285 + 3.16828704402386 NA Intergenic B3A|SINE|B2 -9309 NM_030022 77998 Mm.160040 NM_030022 ENSMUSG00000036586 Grifin E130101O17Rik galectin-related inter-fiber protein protein-coding unique_peak2_33_277_-0.48879250056298_7.87454482244202_3.16741706687871 chr10 117909571 117911249 + 3.16741706687871 NA Intergenic Intergenic -15049 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_221_1757_0.170811123407647_10.8651249168472_3.16724828109142 chr8 124294045 124297211 + 3.16724828109142 NA intron (NM_139272, intron 2 of 15) intron (NM_139272, intron 2 of 15) 64234 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_71_389_0.350579670495769_8.78262014899749_3.16684867819051 chr14 100260226 100261098 + 3.16684867819051 NA Intergenic Intergenic -110866 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding common_peak1_333_2979_0.132262301524792_11.6072277661119_3.16612245844867 chr1 80339041 80341640 + 3.16612245844867 NA 5' UTR (NM_016716, exon 1 of 16) 5' UTR (NM_016716, exon 1 of 16) 350 NM_001313728 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding common_peak2_87_513_0.307397815872784_9.15932345713027_3.16571590549157 chr11 54935375 54937874 + 3.16571590549157 NA intron (NM_001271455, intron 4 of 17) intron (NM_001271455, intron 4 of 17) 26316 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak1_87_513_0.307397815872784_9.15932345713027_3.16571590549157 chr8 70905405 70906745 + 3.16571590549157 NA exon (NM_173013, exon 1 of 7) exon (NM_173013, exon 1 of 7) 101 NM_173013 270058 Mm.248559 NM_173013 ENSMUSG00000019261 Map1s 6430517J16Rik|Bpy2ip1|Map8|Mtap1s|VCY2IP1 microtubule-associated protein 1S protein-coding common_peak1_89_792_-0.278386106952992_9.49198400222748_3.1652433307217 chr8 122298865 122300738 + 3.1652433307217 NA intron (NM_009569, intron 1 of 9) intron (NM_009569, intron 1 of 9) 17660 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_281_2396_0.146863721116524_11.3004460542074_3.16449204053615 chr5 148398713 148400737 + 3.16449204053615 NA intron (NM_007513, intron 1 of 12) CpG 179 NM_007513 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_110_1002_-0.246187723247486_9.84701202898844_3.16401128620964 chr3 152192668 152194048 + 3.16401128620964 NA intron (NM_027287, intron 2 of 3) intron (NM_027287, intron 2 of 3) 487 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding common_peak1_41_346_-0.434704897593406_8.22143940378156_3.16392103897665 chr10 40302294 40302775 + 3.16392103897665 NA promoter-TSS (NM_007444) promoter-TSS (NM_007444) -346 NM_009665 11702 Mm.253533 NM_009665 ENSMUSG00000075232 Amd1 AdoMetDC|Amd-1|SAMDC|SAMDC 1|adoMetDC1 S-adenosylmethionine decarboxylase 1 protein-coding common_peak1_41_346_-0.434704897593406_8.22143940378156_3.16392103897665-3 chr5 119347784 119348534 + 3.16392103897665 NA Intergenic Intergenic -148141 NR_046033 665194 Mm.491047 NR_046033 ENSMUSG00000107334 Gm7538 EG665194 predicted gene 7538 ncRNA common_peak1_41_346_-0.434704897593406_8.22143940378156_3.16392103897665-2 chr10 63243085 63243771 + 3.16392103897665 NA promoter-TSS (NM_026101) promoter-TSS (NM_026101) -369 NM_030114 67345 Mm.234437 NM_026101 ENSMUSG00000020064 Herc4 1700056O17Rik|4921531D01Rik|9530080M15Rik|mKIAA1593 hect domain and RLD 4 protein-coding common_peak2_66_352_0.367019326878543_8.64703403671045_3.16349699907427 chr11 68456857 68459328 + 3.16349699907427 NA intron (NM_177320, intron 1 of 18) intron (NM_177320, intron 1 of 18) 25967 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak1_129_869_0.238655240783162_9.88419921112767_3.16345371098651 chr10 57531717 57532717 + 3.16345371098651 NA intron (NM_019760, intron 1 of 8) CpG 312 NM_019760 56442 Mm.29344 NM_019760 ENSMUSG00000019877 Serinc1 1500011D18Rik|AI315070|AIGP-2|TMS-2|Tde1l|Tde2|Tms2|mKIAA1253 serine incorporator 1 protein-coding unique_peak2_30_252_-0.516311369960004_7.72483788971431_3.16292421125424 chr8 122960756 122962786 + 3.16292421125424 NA intron (NR_037865, intron 2 of 13) intron (NR_037865, intron 2 of 13) 80513 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_30_252_-0.516311369960004_7.72483788971431_3.16292421125424 chr5 88727572 88728144 + 3.16292421125424 NA intron (NM_026735, intron 1 of 5) intron (NM_026735, intron 1 of 5) 6987 NM_026735 68473 Mm.35764 NM_026735 ENSMUSG00000006262 Mob1b 1110003E08Rik|AU015450|B230364F10|Mobkl1a MOB kinase activator 1B protein-coding common_peak1_133_904_0.235382029365512_9.93946499665332_3.1628698119317 chr15 79690710 79691753 + 3.1628698119317 NA intron (NM_013818, intron 1 of 11) CpG 335 NM_013818 14904 Mm.19080 NM_013818 ENSMUSG00000042535 Gtpbp1 AL022987|AW045683|C85212|GP-1|Gtpbp GTP binding protein 1 protein-coding common_peak1_70_382_0.35195896392206_8.75718006388599_3.16257995104015 chr1 92079443 92080508 + 3.16257995104015 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 100366 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak2_70_382_0.35195896392206_8.75718006388599_3.16257995104015 chr6 127245449 127246809 + 3.16257995104015 NA Intergenic Intergenic 61838 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak2_262_2696_-0.146698786960142_11.3237904127555_3.16257313999036 chr8 122694667 122703500 + 3.16257313999036 NA promoter-TSS (NM_009824) promoter-TSS (NM_009824) 26 NM_009824 12398 Mm.194339 NM_009824 ENSMUSG00000006362 Cbfa2t3 A630044F12Rik|AI465270|AW229127|Cbfa2t3h|ETO-2|Eto2|MTGR2 core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) protein-coding common_peak2_124_824_0.245870469881526_9.81118554407394_3.16237907209044 chr14 70099466 70100859 + 3.16237907209044 NA promoter-TSS (NM_021328) promoter-TSS (NM_021328) 17 NM_021328 57784 Mm.24186 NM_021328 ENSMUSG00000022089 Bin3 1700015F07Rik bridging integrator 3 protein-coding common_peak2_326_2899_0.134039566780626_11.5688569682926_3.16197202823044 chr3 84813494 84816300 + 3.16197202823044 NA promoter-TSS (NM_001177773) promoter-TSS (NM_001177773) -680 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak2_339_3048_0.130746035215457_11.6394934526175_3.1617197751949 chr14 34309501 34312235 + 3.1617197751949 NA promoter-TSS (NM_029389) promoter-TSS (NM_029389) 141 NM_008133 14661 Mm.10600 NM_008133 ENSMUSG00000021794 Glud1 AI118167|Gdh-X|Glud|Gludl glutamate dehydrogenase 1 protein-coding common_peak1_21_178_-0.624018034570305_7.1718067599791_3.16162074100582 chr13 45389081 45389526 + 3.16162074100582 NA promoter-TSS (NM_153789) promoter-TSS (NM_153789) -439 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak1_21_178_-0.624018034570305_7.1718067599791_3.16162074100582-3 chr3 20104374 20104882 + 3.16162074100582 NA intron (NM_009210, intron 18 of 24) intron (NM_009210, intron 18 of 24) 46337 NR_105047 20585 Mm.209650 NM_009210 ENSMUSG00000002428 Hltf AF010600|BC057116|P113|Smarca3|Snf2l3 helicase-like transcription factor protein-coding common_peak1_21_178_-0.624018034570305_7.1718067599791_3.16162074100582-2 chr13 52581882 52582398 + 3.16162074100582 NA Intergenic Intergenic -1297 NM_001198977 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak1_88_782_-0.279850128526853_9.47294343302761_3.16152100611306 chr8 77422296 77423082 + 3.16152100611306 NA intron (NM_030113, intron 5 of 22) intron (NM_030113, intron 5 of 22) -94367 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_34_138_0.562504641800026_7.40019339362352_3.16129077353958 chr7 25155255 25155951 + 3.16129077353958 NA non-coding (NR_045847, exon 2 of 3) non-coding (NR_045847, exon 2 of 3) 534 NR_045848 434147 Mm.59171 NM_001033781 ENSMUSG00000074274 D930028M14Rik EG434147 RIKEN cDNA D930028M14 gene ncRNA common_peak1_34_138_0.562504641800026_7.40019339362352_3.16129077353958-2 chr9 45280077 45280853 + 3.16129077353958 NA Intergenic Intergenic -11319 NM_008348 16154 Mm.379327 NM_008348 ENSMUSG00000032089 Il10ra AW553859|CDw210|CDw210a|IL-10R1|IL-10RA|Il10r|mIL-10R interleukin 10 receptor, alpha protein-coding common_peak2_34_138_0.562504641800026_7.40019339362352_3.16129077353958 chr1 160299758 160300827 + 3.16129077353958 NA intron (NM_001038621, intron 2 of 8) intron (NM_001038621, intron 2 of 8) -4320 NR_035448 100316784 NR_035448 ENSMUSG00000089204 Mir1927 mmu-mir-1927 microRNA 1927 ncRNA common_peak1_283_2418_0.146189114239803_11.3132896110998_3.16123296315918 chr7 114316625 114319049 + 3.16123296315918 NA intron (NR_029437, intron 3 of 3) intron (NR_029437, intron 3 of 3) -41721 NM_011965 26440 Mm.121265 NM_011965 ENSMUSG00000030751 Psma1 C2|HC2|Pros-30|alpha-type proteasome (prosome, macropain) subunit, alpha type 1 protein-coding common_peak1_23_194_-0.593554845657516_7.31055289092085_3.1609121172506-4 chr15 99457892 99458517 + 3.1609121172506 NA promoter-TSS (NM_001001884) promoter-TSS (NM_001001884) -456 NM_001001884 380969 Mm.22915 NM_001001884 ENSMUSG00000023009 Nckap5l C230021P08Rik|Cep169 NCK-associated protein 5-like protein-coding common_peak1_23_194_-0.593554845657516_7.31055289092085_3.1609121172506-3 chr11 117828856 117829385 + 3.1609121172506 NA intron (NM_027827, intron 2 of 10) intron (NM_027827, intron 2 of 10) -3106 NM_009387 21877 Mm.2661 NM_009387 ENSMUSG00000025574 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 protein-coding common_peak1_23_194_-0.593554845657516_7.31055289092085_3.1609121172506-5 chr8 13597861 13598411 + 3.1609121172506 NA intron (NM_009025, intron 5 of 23) intron (NM_009025, intron 5 of 23) -35675 NM_001080781 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak1_23_194_-0.593554845657516_7.31055289092085_3.1609121172506-2 chr1 171646021 171646496 + 3.1609121172506 NA intron (NM_144539, intron 2 of 7) intron (NM_144539, intron 2 of 7) -4358 NR_106151 102465784 NR_106151 ENSMUSG00000098316 Mir7683 Gm27950|mmu-mir-7683 microRNA 7683 ncRNA common_peak1_23_194_-0.593554845657516_7.31055289092085_3.1609121172506 chr1 40393585 40394151 + 3.1609121172506 NA Intergenic MLT1B|LTR|ERVL-MaLR -35702 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_58_498_-0.357369600295435_8.78421120518954_3.16036196855547 chr11 116376976 116378194 + 3.16036196855547 NA intron (NM_027258, intron 2 of 18) intron (NM_027258, intron 2 of 18) 35447 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_254_2104_0.156171846052018_11.1176904409798_3.16019553946675 chr12 102329618 102333156 + 3.16019553946675 NA intron (NM_001161365, intron 3 of 9) intron (NM_001161365, intron 3 of 9) 47746 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_64_338_0.371773057196553_8.59102799173462_3.15997409840587 chr13 33047276 33049290 + 3.15997409840587 NA Intergenic L1_Mur3|LINE|L1 20869 NM_011452 20706 Mm.45371 NM_011452 ENSMUSG00000021403 Serpinb9b 1600019A21Rik|R86|SPI-CI|Spi10|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9b protein-coding common_peak2_49_233_0.442262783739336_8.09149611145307_3.15978039329586 chr6 126848615 126849686 + 3.15978039329586 NA promoter-TSS (NM_025358) promoter-TSS (NM_025358) -6 NM_025358 66108 Mm.29939 NM_025358 ENSMUSG00000000399 Ndufa9 1010001N11Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 protein-coding common_peak1_49_233_0.442262783739336_8.09149611145307_3.15978039329586 chr4 59207036 59207886 + 3.15978039329586 NA intron (NM_011673, intron 1 of 8) PB1D10|SINE|Alu 17911 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak2_38_162_0.524215295376783_7.61083580191947_3.15955764197734-2 chr5 72558873 72559723 + 3.15955764197734 NA intron (NM_133921, intron 1 of 22) CpG 347 NM_133921 100978 Mm.187453 NM_133921 ENSMUSG00000072889 Nfxl1 1700012H24Rik|AW538212|D430033A06Rik|DNABF|GCF|Gm1058|TCF9 nuclear transcription factor, X-box binding-like 1 protein-coding common_peak1_38_162_0.524215295376783_7.61083580191947_3.15955764197734 chr19 43939569 43940414 + 3.15955764197734 NA intron (NM_028029, intron 1 of 15) CpG 207 NM_028029 71972 Mm.159024 NM_028029 ENSMUSG00000025195 Dnmbp 2410003L07Rik|2410003M15Rik|TUBA dynamin binding protein protein-coding common_peak2_38_162_0.524215295376783_7.61083580191947_3.15955764197734 chr4 140925402 140926482 + 3.15955764197734 NA intron (NM_008812, intron 4 of 15) intron (NM_008812, intron 4 of 15) 19582 NM_008812 18600 Mm.2296 NM_008812 ENSMUSG00000028927 Padi2 Pdi|Pdi2|mKIAA0994 peptidyl arginine deiminase, type II protein-coding common_peak1_67_360_0.360905856459713_8.67630795511703_3.15896723804879 chr17 31207556 31208552 + 3.15896723804879 NA promoter-TSS (NM_177823) promoter-TSS (NM_177823) -12 NM_177823 328795 Mm.387930 NM_177823 ENSMUSG00000042345 Ubash3a 5830413C03Rik|C330001M22|Sts-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing, A protein-coding common_peak2_59_507_-0.353415942988105_8.81197671527811_3.15870995818703 chr15 58927085 58928839 + 3.15870995818703 NA intron (NM_175151, intron 2 of 11) intron (NM_175151, intron 2 of 11) 5768 NM_175151 69694 Mm.383230 NM_175151 ENSMUSG00000050891 Tatdn1 2310079P03Rik|CDA11 TatD DNase domain containing 1 protein-coding common_peak2_108_686_0.267575946711537_9.55795426217387_3.15851511097395 chr2 135772721 135775512 + 3.15851511097395 NA intron (NM_013829, intron 1 of 36) intron (NM_013829, intron 1 of 36) 32286 NM_013829 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak1_156_1116_0.212062163922335_10.2314445524445_3.15844169025631 chrX 142389653 142391258 + 3.15844169025631 NA promoter-TSS (NM_207625) promoter-TSS (NM_207625) 80 NM_001033600 50790 Mm.391337 NM_019477 ENSMUSG00000031278 Acsl4 9430020A05Rik|ACS4|AU018108|Facl4|Lacs4 acyl-CoA synthetase long-chain family member 4 protein-coding common_peak2_87_772_-0.281302238858185_9.45367348449576_3.15800733514945 chr8 84269584 84271189 + 3.15800733514945 NA promoter-TSS (NM_026350) promoter-TSS (NM_026350) 16 NM_001294281 67736 Mm.30095 NM_026350 ENSMUSG00000004994 Ccdc130 4930527D15Rik|C77430 coiled-coil domain containing 130 protein-coding common_peak2_149_1409_-0.204717427810131_10.3591207333811_3.15767566259402 chr11 101644526 101646830 + 3.15767566259402 NA Intergenic Intergenic 17729 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding common_peak1_42_354_-0.425948044138094_8.258701192323_3.15728116188063 chr5 100518316 100519042 + 3.15728116188063 NA intron (NM_012001, intron 1 of 9) CpG 370 NM_012001 26891 Mm.957 NM_012001 ENSMUSG00000035297 Cops4 AW208976|D5Ertd774e COP9 signalosome subunit 4 protein-coding common_peak1_42_354_-0.425948044138094_8.258701192323_3.15728116188063-2 chr9 63697537 63698603 + 3.15728116188063 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 59924 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_63_543_-0.337984955752459_8.91847036337411_3.15716556157721 chr12 25436932 25438981 + 3.15716556157721 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 308782 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_61_525_-0.34562447337164_8.86610675260648_3.15698029844349 chr3 107206044 107207578 + 3.15698029844349 NA Intergenic Intergenic 14921 NM_001111143 229697 Mm.297051 NM_001111143 ENSMUSG00000046213 Cym Gm131 chymosin protein-coding common_peak2_61_525_-0.34562447337164_8.86610675260648_3.15698029844349-2 chr9 107984748 107986552 + 3.15698029844349 NA intron (NM_026597, intron 1 of 1) intron (NM_026597, intron 1 of 1) 266 NM_026597 68176 Mm.76166 NM_026597 ENSMUSG00000042106 Fam212a 6230427J02Rik|Inka1 family with sequence similarity 212, member A protein-coding common_peak2_62_534_-0.341785921336728_8.89250212062015_3.156846393554 chr17 44776621 44777971 + 3.156846393554 NA 5' UTR (NM_178652, exon 1 of 12) 5' UTR (NM_178652, exon 1 of 12) 125 NM_178652 109115 Mm.431327 NM_178652 ENSMUSG00000038954 Supt3 2310066G22Rik|AI315192|SPT3|SPT3L|Supt3h suppressor of Ty 3 protein-coding common_peak1_16_139_-0.725746755970794_6.76640963895957_3.15585883857737 chr15 5237272 5237719 + 3.15585883857737 NA intron (NM_001136079, intron 2 of 2) intron (NM_001136079, intron 2 of 2) 6692 NM_001136079 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding unique_peak2_16_139_-0.725746755970794_6.76640963895957_3.15585883857737 chr10 128663171 128664097 + 3.15585883857737 NA Intergenic Intergenic 10284 NM_173733 211389 Mm.23352 NM_173733 ENSMUSG00000049858 Suox SO sulfite oxidase protein-coding common_peak1_16_139_-0.725746755970794_6.76640963895957_3.15585883857737-2 chr4 86713854 86714144 + 3.15585883857737 NA Intergenic B1F2|SINE|Alu -34556 NM_184088 329877 Mm.273718 NM_184088 ENSMUSG00000038024 Dennd4c 1700065A05Rik|AA420392 DENN/MADD domain containing 4C protein-coding common_peak1_28_104_0.634417796846446_7.03145441608935_3.15557885852364 chr17 25220188 25220821 + 3.15557885852364 NA intron (NM_001197024, intron 10 of 14) intron (NM_001197024, intron 10 of 14) -2078 NM_028789 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding common_peak2_28_104_0.634417796846446_7.03145441608935_3.15557885852364 chr2 167830595 167831423 + 3.15557885852364 NA Intergenic Intergenic -101318 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_25_211_-0.572499209922267_7.44167084960207_3.15514512890139 chr8 57511079 57511608 + 3.15514512890139 NA promoter-TSS (NM_008252) promoter-TSS (NM_008252) -500 NM_008252 97165 Mm.276881 NM_008252 ENSMUSG00000054717 Hmgb2 C80539|HMG-2|Hmg2 high mobility group box 2 protein-coding common_peak1_66_571_-0.329327636628665_8.99520751846406_3.15501667830569 chr11 119913528 119914551 + 3.15501667830569 NA intron (NM_001085498, intron 1 of 7) CpG 229 NM_001085498 208092 Mm.306673 NM_001085498 ENSMUSG00000025371 Chmp6 2400004G01Rik charged multivesicular body protein 6 protein-coding common_peak1_70_609_-0.319505886603231_9.09291248914863_3.1545591143346 chr11 96788721 96789871 + 3.1545591143346 NA 5' UTR (NM_007622, exon 1 of 6) 5' UTR (NM_007622, exon 1 of 6) 160 NM_007622 12412 Mm.29055 NM_007622 ENSMUSG00000018666 Cbx1 Cbx|Cbx-rs2|E430007M08Rik|HP1B|Hp1beta|M31|MOD1 chromobox 1 protein-coding common_peak2_200_1544_0.181287093511269_10.6840346695474_3.15324596682485 chr14 70064499 70067147 + 3.15324596682485 NA Intergenic Intergenic -11622 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding unique_peak2_10_93_-0.921403420170042_6.09388714159262_3.15268045042639 chr14 122181613 122182211 + 3.15268045042639 NA intron (NM_029556, intron 1 of 7) intron (NM_029556, intron 1 of 7) 218 NM_029556 69634 Mm.34608 NM_029556 ENSMUSG00000025545 Clybl 0610033J05Rik|2310014M14Rik|AI256068|Clb citrate lyase beta like protein-coding common_peak2_10_93_-0.921403420170042_6.09388714159262_3.15268045042639 chr11 88993146 88993793 + 3.15268045042639 NA Intergenic B3|SINE|B2 -5934 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding common_peak2_132_896_0.2349361377431_9.92643224379081_3.15206018441574 chr8 119782867 119785208 + 3.15206018441574 NA Intergenic Intergenic -5621 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding common_peak2_49_416_-0.391276070121922_8.5082655383837_3.15078853040531 chrX 134307280 134308768 + 3.15078853040531 NA promoter-TSS (NM_001305631) promoter-TSS (NM_001305631) -60 NM_145924 102920 Mm.34903 NM_145924 ENSMUSG00000031262 Cenpi CENP-I|Fshprh1 centromere protein I protein-coding common_peak1_468_4599_0.106661663583454_12.2207489776235_3.15051242899335 chr1 172499279 172503090 + 3.15051242899335 NA intron (NM_178598, intron 1 of 4) intron (NM_178598, intron 1 of 4) 938 NM_178598 21346 Mm.271711 NM_178598 ENSMUSG00000026547 Tagln2 2700094C18Rik|SM22beta|Sm22B|Sm22a transgelin 2 protein-coding common_peak1_34_285_-0.478425622254855_7.92065852565096_3.14997527589831-3 chr6 130127628 130128465 + 3.14997527589831 NA intron (NM_053151, intron 2 of 7) intron (NM_053151, intron 2 of 7) 1789 NM_010650 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding common_peak1_34_285_-0.478425622254855_7.92065852565096_3.14997527589831-2 chr2 80616904 80617767 + 3.14997527589831 NA 5' UTR (NM_024438, exon 1 of 4) 5' UTR (NM_024438, exon 1 of 4) 121 NM_024438 68082 Mm.306818 NM_024438 ENSMUSG00000027001 Dusp19 5930436K22Rik|C79103|SKRP1|TS-DSP1 dual specificity phosphatase 19 protein-coding common_peak1_34_285_-0.478425622254855_7.92065852565096_3.14997527589831 chr17 35919262 35919901 + 3.14997527589831 NA intron (NM_001163818, intron 1 of 18) intron (NM_001163818, intron 1 of 18) 1692 NR_035445 100316810 NR_035445 ENSMUSG00000084751 Mir1894 Mirn1894|mmu-mir-1894 microRNA 1894 ncRNA common_peak2_43_194_0.479079740130697_7.84687018381496_3.1494483013051 chr1 189007110 189008039 + 3.1494483013051 NA exon (NM_172650, exon 1 of 18) exon (NM_172650, exon 1 of 18) 266 NM_172650 226823 Mm.209880 NM_172650 ENSMUSG00000026608 Kctd3 4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45 potassium channel tetramerisation domain containing 3 protein-coding common_peak1_43_194_0.479079740130697_7.84687018381496_3.1494483013051-2 chr8 25720045 25720904 + 3.1494483013051 NA TTS (NM_001081269) TTS (NM_001081269) 426 NR_121643 71910 Mm.385055 NM_028000 ENSMUSG00000031570 Plpp5 1810019D05Rik|2310022A04Rik|AW045471|Ppapdc1|Ppapdc1b phospholipid phosphatase 5 protein-coding common_peak2_43_194_0.479079740130697_7.84687018381496_3.1494483013051-2 chr9 15019810 15021541 + 3.1494483013051 NA intron (NM_019482, intron 2 of 4) intron (NM_019482, intron 2 of 4) 24803 NM_019482 55991 Mm.142253 NM_019482 ENSMUSG00000031934 Panx1 AI847747 pannexin 1 protein-coding common_peak1_43_194_0.479079740130697_7.84687018381496_3.1494483013051 chr15 38384250 38385025 + 3.1494483013051 NA Intergenic Intergenic -83926 NM_001289471 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding common_peak1_38_319_-0.448984645279501_8.09743577224761_3.14935851556163 chr1 53352087 53352801 + 3.14935851556163 NA intron (NM_001290984, intron 1 of 5) intron (NM_001290984, intron 1 of 5) 308 NM_001290984 70396 Mm.285783 NM_133728 ENSMUSG00000026095 Asnsd1 2210409M21Rik asparagine synthetase domain containing 1 protein-coding common_peak1_197_1939_-0.17377416207397_10.8349538560375_3.14902830326818 chr13 33069806 33071891 + 3.14902830326818 NA Intergenic Intergenic -13255 NM_173052 282663 Mm.314490 NM_173052 ENSMUSG00000051029 Serpinb1b 6330533H24Rik|EIB|Serpin1b1|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1b protein-coding common_peak1_398_4395_-0.113940842133589_12.0450052498824_3.14902177907476 chr9 63755952 63759843 + 3.14902177907476 NA promoter-TSS (NM_016769) promoter-TSS (NM_016769) 97 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_185_1804_-0.180354089700588_10.7276060769242_3.14878930340919 chr14 20694607 20696068 + 3.14878930340919 NA TTS (NM_001168273) TTS (NM_001168273) 369 NM_028428 73068 Mm.277552 NM_028428 ENSMUSG00000039357 Fut11 3110009G03Rik|AI317183 fucosyltransferase 11 protein-coding common_peak2_94_841_-0.269206632791184_9.5830731066708_3.14829154231739 chr12 24650525 24652258 + 3.14829154231739 NA promoter-TSS (NM_178357) promoter-TSS (NM_178357) 20 NM_178357 194655 Mm.9616 NM_178357 ENSMUSG00000020653 Klf11 9830142A17|D12Ertd427e|Tieg2|Tieg2b|Tieg3 Kruppel-like factor 11 protein-coding common_peak1_363_3328_0.124696509952496_11.7632214101165_3.148244686021 chr12 80944808 80946980 + 3.148244686021 NA promoter-TSS (NR_045057) promoter-TSS (NR_045057) 390 NM_009159 20384 Mm.43331 NM_009159 ENSMUSG00000021134 Srsf5 Sfrs5 serine/arginine-rich splicing factor 5 protein-coding common_peak1_132_1229_-0.220542287564241_10.1541714564445_3.14795470477269 chr5 116023351 116025037 + 3.14795470477269 NA exon (NM_031869, exon 1 of 7) exon (NM_031869, exon 1 of 7) 234 NM_031869 19079 Mm.458152 NM_031869 ENSMUSG00000029513 Prkab1 1300015D22Rik|AU021155|E430008F22 protein kinase, AMP-activated, beta 1 non-catalytic subunit protein-coding common_peak2_118_1083_-0.235076671114227_9.96461070579676_3.14785398360446 chr17 32349165 32351187 + 3.14785398360446 NA intron (NM_017476, intron 1 of 13) intron (NM_017476, intron 1 of 13) 401 NM_017476 54194 Mm.281005 NM_017476 ENSMUSG00000002625 Akap8l HAP95|Nakap95 A kinase (PRKA) anchor protein 8-like protein-coding common_peak2_331_2957_0.132324154441994_11.5965684143201_3.14729607851969 chr18 37923324 37930984 + 3.14729607851969 NA intron (NM_001305981, intron 1 of 28) intron (NM_001305981, intron 1 of 28) 8269 NM_001305980 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding common_peak2_83_482_0.314819887335437_9.07328932250349_3.14612687930558 chr14 32164769 32166740 + 3.14612687930558 NA promoter-TSS (NM_019744) promoter-TSS (NM_019744) -35 NM_019744 27057 Mm.371598 NM_019744 ENSMUSG00000056234 Ncoa4 ARA70|Rfg nuclear receptor coactivator 4 protein-coding common_peak2_107_971_-0.249380314393473_9.80012234640904_3.14586760731151 chr17 28232442 28233825 + 3.14586760731151 NA intron (NM_011145, intron 1 of 7) intron (NM_011145, intron 1 of 7) 379 NM_011145 19015 Mm.328914 NM_011145 ENSMUSG00000002250 Ppard NUC-1|NUC1|Nr1c2|PPAR-beta|PPAR-delta|PPAR[b]|PPARdelta|Pparb|Pparb/d peroxisome proliferator activator receptor delta protein-coding common_peak2_162_1550_-0.19513852711472_10.5014137074787_3.14551738356139 chr8 69749150 69750880 + 3.14551738356139 NA promoter-TSS (NM_001200023) promoter-TSS (NM_001200023) -53 NM_001200023 620419 Mm.460423 NM_001200023 ENSMUSG00000092260 Zfp963 - zinc finger protein 963 protein-coding common_peak1_18_53_0.845476701233422_6.17762585278018_3.14531979957659 chr3 59229514 59230008 + 3.14531979957659 NA intron (NM_177855, intron 16 of 43) intron (NM_177855, intron 16 of 43) -18879 NM_028808 74191 Mm.90067 NM_028808 ENSMUSG00000036362 P2ry13 2010001L06Rik|GPCR1|GPR94|Gpr86|P2Y13|P2yr13|SP174 purinergic receptor P2Y, G-protein coupled 13 protein-coding common_peak1_28_235_-0.533979734849273_7.6156531819372_3.145032736304-2 chr3 116630521 116631030 + 3.145032736304 NA TTS (NM_008246) TTS (NM_008246) -16188 NM_030016 229780 Mm.259648 NM_030016 ENSMUSG00000033439 Trmt13 4631408H19Rik|A330067P21|A930028L21Rik|Ccdc76 tRNA methyltransferase 13 protein-coding common_peak1_28_235_-0.533979734849273_7.6156531819372_3.145032736304 chr14 27383022 27383593 + 3.145032736304 NA intron (NM_001289688, intron 3 of 9) intron (NM_001289688, intron 3 of 9) 21918 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_50_425_-0.387038843098381_8.54119019867665_3.14319694271396 chr2 25332710 25333394 + 3.14319694271396 NA promoter-TSS (NR_027448) promoter-TSS (NR_027448) 309 NM_001029983 227619 Mm.270798 NM_001029983 ENSMUSG00000036646 Man1b1 E430019H13Rik|ERMan1|Gm108|MANA-ER mannosidase, alpha, class 1B, member 1 protein-coding common_peak2_196_1504_0.183558844978235_10.6473271941362_3.14317578520607 chr11 16975891 16980293 + 3.14317578520607 NA intron (NM_019549, intron 9 of 9) intron (NM_019549, intron 9 of 9) 26682 NM_176982 319701 Mm.120672 NM_176982 ENSMUSG00000044966 Fbxo48 A630050E13Rik F-box protein 48 protein-coding common_peak2_52_253_0.427057078670947_8.20221322610764_3.14243419516349 chr4 101238841 101240668 + 3.14243419516349 NA intron (NM_146145, intron 1 of 24) RMER1A|Other|Other 25528 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_26_93_0.667618715161957_6.88839820925862_3.14063858802787-2 chr18 56469048 56469616 + 3.14063858802787 NA intron (NM_026240, intron 1 of 13) intron (NM_026240, intron 1 of 13) 37200 NM_026240 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|NS3TP2 GRAM domain containing 3 protein-coding common_peak1_26_93_0.667618715161957_6.88839820925862_3.14063858802787 chr1 91024156 91024755 + 3.14063858802787 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) 25728 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_81_466_0.320776836542121_9.02766715798072_3.1406129341833 chr1 80388751 80390454 + 3.1406129341833 NA Intergenic L1VL2|LINE|L1 -48912 NM_016716 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding common_peak1_401_4434_-0.113427861699064_12.0580044583389_3.14029242893976 chr1 165843674 165847090 + 3.14029242893976 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 56701 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_187_1826_-0.178905208828757_10.7458083142131_3.13988253684028 chr7 43442036 43444222 + 3.13988253684028 NA promoter-TSS (NR_075104) promoter-TSS (NR_075104) -943 NM_026695 110826 Mm.30200 NM_026695 ENSMUSG00000004610 Etfb 0610009I16Rik|2810441H06Rik electron transferring flavoprotein, beta polypeptide protein-coding common_peak2_31_260_-0.505040422258361_7.7753857854407_3.13985924574787 chr15 75968751 75969864 + 3.13985924574787 NA 5' UTR (NM_001081065, exon 1 of 4) 5' UTR (NM_001081065, exon 1 of 4) 122 NM_001081065 69020 Mm.294295 NM_001081065 ENSMUSG00000034429 Zfp707 1500031N24Rik|AI451708|AW495315 zinc finger protein 707 protein-coding common_peak1_31_260_-0.505040422258361_7.7753857854407_3.13985924574787-2 chr9 64281616 64282217 + 3.13985924574787 NA intron (NM_025372, intron 1 of 7) CpG 309 NM_025372 66131 Mm.196219 NM_025372 ENSMUSG00000032397 Tipin 1110005A05Rik|1110018P21Rik timeless interacting protein protein-coding common_peak1_31_260_-0.505040422258361_7.7753857854407_3.13985924574787 chr3 59120203 59120672 + 3.13985924574787 NA intron (NM_001287119, intron 1 of 2) URR1A|DNA|hAT-Charlie 10325 NM_001008497 140795 Mm.439021 NM_133200 ENSMUSG00000036381 P2ry14 A330108O13Rik|Gpr105|P2Y14 purinergic receptor P2Y, G-protein coupled, 14 protein-coding common_peak1_257_2636_-0.148207858270972_11.2905779267291_3.13937649254858 chr6 136516736 136519792 + 3.13937649254858 NA promoter-TSS (NM_019426) promoter-TSS (NM_019426) -587 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_210_2086_-0.166615546020871_10.9439071121494_3.13894204208206 chr16 76371752 76374024 + 3.13894204208206 NA 5' UTR (NM_173440, exon 1 of 4) 5' UTR (NM_173440, exon 1 of 4) 161 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak1_143_1345_-0.209940399178581_10.289492495021_3.13887139876349 chr1 180849695 180850850 + 3.13887139876349 NA promoter-TSS (NM_145943) promoter-TSS (NM_145943) -879 NM_145943 208768 Mm.272625 NM_145943 ENSMUSG00000038806 Sde2 - SDE2 telomere maintenance homolog (S. pombe) protein-coding common_peak2_44_371_-0.412980173543399_8.33266872433633_3.13813853991132 chr7 137437149 137438568 + 3.13813853991132 NA intron (NR_033611, intron 1 of 10) CpG 184 NR_033611 620016 Mm.388932 NR_033611 ENSMUSG00000100863 Gm12669 OTTMUSG00000007920 glutaredoxin 3 pseudogene pseudo common_peak2_154_1463_-0.200912046671416_10.4152438149483_3.13730800895032 chr7 30551245 30553145 + 3.13730800895032 NA promoter-TSS (NM_183321) promoter-TSS (NM_183321) 77 NM_183321 333193 Mm.34885 NM_183321 ENSMUSG00000036864 Proser3 - proline and serine rich 3 protein-coding common_peak1_51_434_-0.382838034908803_8.57345257328169_3.13651220489223 chr1 182528100 182529097 + 3.13651220489223 NA Intergenic Intergenic -11115 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding unique_peak2_18_154_-0.675760201877347_6.93824430433556_3.13650404822379-2 chr3 27322183 27323552 + 3.13650404822379 NA intron (NM_009425, intron 1 of 4) intron (NM_009425, intron 1 of 4) 5790 NM_009425 22035 Mm.1062 NM_009425 ENSMUSG00000039304 Tnfsf10 A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Tnlg6a|Trail tumor necrosis factor (ligand) superfamily, member 10 protein-coding unique_peak2_18_154_-0.675760201877347_6.93824430433556_3.13650404822379 chr17 35872924 35874009 + 3.13650404822379 NA intron (NM_001146710, intron 2 of 3) B3|SINE|B2 -6312 NM_026987 69192 Mm.390986 NM_026987 ENSMUSG00000024422 Dhx16 2410006N22Rik|DBP2|Ddx16|mKIAA0577 DEAH (Asp-Glu-Ala-His) box polypeptide 16 protein-coding common_peak1_18_154_-0.675760201877347_6.93824430433556_3.13650404822379 chr18 62163659 62164171 + 3.13650404822379 NA Intergenic Intergenic 16066 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak2_18_154_-0.675760201877347_6.93824430433556_3.13650404822379 chr5 123228162 123228740 + 3.13650404822379 NA intron (NM_026000, intron 1 of 5) CpG 261 NM_026000 67151 Mm.278997 NM_026000 ENSMUSG00000029440 Psmd9 1500011J20Rik|2610202L11Rik|Bridge-1|P27 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 protein-coding common_peak1_26_218_-0.552579492761579_7.49849731322038_3.13486242306092 chr9 32486982 32487598 + 3.13486242306092 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 54162 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding unique_peak2_26_218_-0.552579492761579_7.49849731322038_3.13486242306092 chr2 164093132 164094531 + 3.13486242306092 NA intron (NM_021420, intron 5 of 10) intron (NM_021420, intron 5 of 10) 19653 NM_021420 58231 Mm.234472 NM_021420 ENSMUSG00000018209 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 protein-coding unique_peak2_26_218_-0.552579492761579_7.49849731322038_3.13486242306092-2 chr4 128992759 128993899 + 3.13486242306092 NA 5' UTR (NM_016895, exon 1 of 7) 5' UTR (NM_016895, exon 1 of 7) 105 NM_001033966 11637 Mm.29460 NM_016895 ENSMUSG00000028792 Ak2 Ak-2|D4Ertd220e adenylate kinase 2 protein-coding common_peak1_26_218_-0.552579492761579_7.49849731322038_3.13486242306092-2 chr9 66059469 66060087 + 3.13486242306092 NA promoter-TSS (NM_011149) promoter-TSS (NM_011149) -391 NM_011149 19035 Mm.335249 NM_011149 ENSMUSG00000032383 Ppib AA408962|AA553318|AI844835|Cphn-2|Cphn2|CyP-20b peptidylprolyl isomerase B protein-coding unique_peak2_26_218_-0.552579492761579_7.49849731322038_3.13486242306092-3 chrX 164245374 164246833 + 3.13486242306092 NA intron (NM_009759, intron 4 of 18) intron (NM_009759, intron 4 of 18) 12090 NM_009759 12169 Mm.504 NM_009759 ENSMUSG00000031377 Bmx Etk|Etk/Bmx|Tyro8 BMX non-receptor tyrosine kinase protein-coding common_peak1_164_1571_-0.192959967719405_10.5219055183989_3.13473447370713 chr11 6519131 6521679 + 3.13473447370713 NA intron (NM_178440, intron 1 of 21) intron (NM_178440, intron 1 of 21) 553 NM_178440 246177 Mm.239554 NM_178440 ENSMUSG00000020437 Myo1g E430002D17Rik myosin IG protein-coding common_peak2_180_1347_0.192602534294503_10.4929060483291_3.13299364091434 chr15 76624894 76626907 + 3.13299364091434 NA TTS (NM_183091) TTS (NM_183091) 184 NM_025842 66914 Mm.30028 NM_025842 ENSMUSG00000059323 Vps28 1110014J03Rik|CIIA|D730005C08Rik vacuolar protein sorting 28 protein-coding common_peak2_53_451_-0.371359084389237_8.63449942022057_3.13273132900802 chr15 78173364 78175238 + 3.13273132900802 NA promoter-TSS (NM_025931) promoter-TSS (NM_025931) -193 NM_025931 67042 Mm.30191 NM_025931 ENSMUSG00000016637 Ift27 2600013G09Rik|Rabl4 intraflagellar transport 27 protein-coding common_peak2_212_1666_0.174255673013883_10.7901662254934_3.1326586559888 chr8 83607225 83609701 + 3.1326586559888 NA promoter-TSS (NM_001308227) promoter-TSS (NM_001308227) -85 NM_001308227 81489 Mm.282092 NM_018808 ENSMUSG00000005483 Dnajb1 0610007I11Rik|DjB1|HSPF1|Hdj1|Hsp40 DnaJ heat shock protein family (Hsp40) member B1 protein-coding common_peak2_142_987_0.223823114997749_10.0602787890836_3.13249909773563 chr2 91069137 91071417 + 3.13249909773563 NA promoter-TSS (NM_026721) promoter-TSS (NM_026721) 38 NM_026721 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding common_peak1_160_1154_0.208319777055559_10.2778370248312_3.13130371129752 chr11 49711728 49713373 + 3.13130371129752 NA 5' UTR (NM_212484, exon 1 of 12) 5' UTR (NM_212484, exon 1 of 12) 172 NM_212484 104625 Mm.247113 NM_212484 ENSMUSG00000020362 Cnot6 CCR4 CCR4-NOT transcription complex, subunit 6 protein-coding common_peak2_79_451_0.324179887588301_8.98226890620934_3.13084690302377 chr5 107687346 107688981 + 3.13084690302377 NA Intergenic CpG 15317 NR_045871 654809 Mm.399159 NR_045871 ENSMUSG00000106333 4930428O21Rik - RIKEN cDNA 4930428O21 gene ncRNA common_peak1_90_801_-0.275113383734872_9.50990173458748_3.12992204201734 chr2 3723078 3724585 + 3.12992204201734 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 10373 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_209_1636_0.175353935389023_10.7645155741687_3.12969454791976 chr1 133024301 133026608 + 3.12969454791976 NA promoter-TSS (NR_126506) promoter-TSS (NR_126506) -38 NM_001302801 17248 Mm.426531 NM_008575 ENSMUSG00000054387 Mdm4 4933417N07Rik|AA414968|AL023055|AU018793|AU021806|C85810|Mdmx transformed mouse 3T3 cell double minute 4 protein-coding unique_peak1_15_40_0.938701258507084_5.82690263387163_3.12845093902994 chr11 118216446 118216812 + 3.12845093902994 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -3887 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak1_15_40_0.938701258507084_5.82690263387163_3.12845093902994-2 chr15 64050826 64051216 + 3.12845093902994 NA intron (NM_144846, intron 1 of 11) BC1_Mm|scRNA|scRNA 9427 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_15_40_0.938701258507084_5.82690263387163_3.12845093902994 chrX 150485710 150486009 + 3.12845093902994 NA Intergenic MMVL30-int|LTR|ERV1 -26709 NM_001164683 382245 Mm.277309 NM_001164683 ENSMUSG00000041353 Tmem29 2700081K05Rik|6330540D07Rik|CXorf44-like transmembrane protein 29 protein-coding unique_peak2_15_131_-0.748140856233285_6.67032369124181_3.12635713382698 chr8 121519194 121520248 + 3.12635713382698 NA Intergenic Intergenic 22233 NM_029597 76405 Mm.165697 NM_029597 ENSMUSG00000031809 1700018B08Rik 1700084O22Rik RIKEN cDNA 1700018B08 gene protein-coding common_peak1_15_131_-0.748140856233285_6.67032369124181_3.12635713382698 chr10 111995524 111995932 + 3.12635713382698 NA intron (NM_028608, intron 1 of 5) B1_Mus1|SINE|Alu 1536 NM_028608 73690 Mm.173790 NM_028608 ENSMUSG00000056888 Glipr1 2410114O14Rik|RTVP-1|RTVP1|mRTVP-1 GLI pathogenesis-related 1 (glioma) protein-coding common_peak2_465_5278_-0.103325078610423_12.3143864113654_3.12454454372183 chr11 104440113 104444210 + 3.12454454372183 NA 5' UTR (NM_001081045, exon 1 of 14) 5' UTR (NM_001081045, exon 1 of 14) 130 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak2_145_1366_-0.207866190034075_10.312864432589_3.12412976429378 chr1 128102013 128104189 + 3.12412976429378 NA promoter-TSS (NM_027678) promoter-TSS (NM_027678) -54 NM_001285945 226409 Mm.425048 NM_027678 ENSMUSG00000036086 Zranb3 4933425L19Rik|AH2|AI316834|C730006D09 zinc finger, RAN-binding domain containing 3 protein-coding common_peak2_491_4890_0.102888654253633_12.3073580764646_3.12261984992764 chr2 158665388 158670951 + 3.12261984992764 NA intron (NM_001159662, intron 1 of 10) intron (NM_001159662, intron 1 of 10) 1034 NM_001159662 228852 Mm.150540 NM_153089 ENSMUSG00000037754 Ppp1r16b ANKRD4|C130078N17Rik|TIMAP|Wdt4 protein phosphatase 1, regulatory (inhibitor) subunit 16B protein-coding common_peak2_77_675_-0.301323675487966_9.2502175985382_3.12255305353884 chr19 46611592 46614285 + 3.12255305353884 NA intron (NM_001177812, intron 2 of 4) intron (NM_001177812, intron 2 of 4) -10463 NM_001177813 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_166_1212_0.20238277056745_10.3455552204042_3.12229079828725 chr1 138257734 138259651 + 3.12229079828725 NA Intergenic Intergenic -15046 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_77_436_0.328066291293618_8.93552261514741_3.12221510874191 chr10 95969893 95971777 + 3.12221510874191 NA intron (NM_001001932, intron 1 of 28) intron (NM_001001932, intron 1 of 28) 30172 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak1_88_781_-0.278006428543165_9.47202158303577_3.12183382482268 chr6 112946849 112948235 + 3.12183382482268 NA promoter-TSS (NM_080448) promoter-TSS (NM_080448) -276 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak2_88_781_-0.278006428543165_9.47202158303577_3.12183382482268 chr2 32570106 32571954 + 3.12183382482268 NA intron (NM_010073, intron 1 of 3) intron (NM_010073, intron 1 of 3) 172 NM_010073 13481 Mm.22001 NM_010073 ENSMUSG00000026810 Dpm2 AW557993|R75484 dolichol-phosphate (beta-D) mannosyltransferase 2 protein-coding common_peak1_40_336_-0.435161516116433_8.17902402312364_3.1210304308433 chr10 42057486 42058232 + 3.1210304308433 NA Intergenic Intergenic -39477 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak1_40_336_-0.435161516116433_8.17902402312364_3.1210304308433-2 chr7 122314333 122314950 + 3.1210304308433 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 25516 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak2_56_281_0.404947367151379_8.34202503597448_3.1206699138048 chr4 83272868 83274764 + 3.1206699138048 NA intron (NM_027238, intron 2 of 19) RMER17B|LTR|ERVK 50373 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_96_860_-0.264531064033434_9.61760389538013_3.12065546136365 chr3 79247622 79248893 + 3.12065546136365 NA non-coding (NR_045502, exon 2 of 3) non-coding (NR_045502, exon 2 of 3) 35338 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak1_40_175_0.502011646428128_7.71043744185136_3.11992090881335 chr9 58275412 58276149 + 3.11992090881335 NA Intergenic Intergenic 22616 NM_026942 69106 Mm.216502 NM_026942 ENSMUSG00000032333 Stoml1 1810015E19Rik|AI847431|SLP1|STORP|UNC24|WPB72 stomatin-like 1 protein-coding common_peak1_32_268_-0.494142414895744_7.82439115510875_3.11927328785989 chr10 81408945 81409601 + 3.11927328785989 NA intron (NM_026756, intron 3 of 8) intron (NM_026756, intron 3 of 8) 7024 NR_106141 102465778 NR_106141 ENSMUSG00000105379 Mir1191b mmu-mir-1191b microRNA 1191b ncRNA common_peak1_32_268_-0.494142414895744_7.82439115510875_3.11927328785989-3 chr9 62608476 62608783 + 3.11927328785989 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -69226 NM_176922 319480 Mm.34883 NM_176922 ENSMUSG00000032243 Itga11 4732459H24Rik integrin alpha 11 protein-coding common_peak1_32_268_-0.494142414895744_7.82439115510875_3.11927328785989-2 chr4 135439458 135440106 + 3.11927328785989 NA Intergenic B1_Mus1|SINE|Alu -5977 NM_022980 53902 Mm.331970 NM_022980 ENSMUSG00000059713 Rcan3 AU041093|Csp3|Dscr1l2 regulator of calcineurin 3 protein-coding common_peak2_87_771_-0.279434672201416_9.45273970116737_3.11808983387738 chr14 31127989 31129653 + 3.11808983387738 NA 5' UTR (NM_001308466, exon 1 of 4) 5' UTR (NM_001308466, exon 1 of 4) 109 NM_001308466 66487 Mm.379116 NM_001308091 ENSMUSG00000058351 Smim4 2010107H07Rik|Gm41122 small integral membrane protein 4 protein-coding common_peak2_202_1994_-0.16997360733167_10.8771862274439_3.118067604021 chr5 139165609 139168530 + 3.118067604021 NA intron (NM_001081265, intron 7 of 12) intron (NM_001081265, intron 7 of 12) 16846 NM_001081265 433956 Mm.5547 NM_001081265 ENSMUSG00000025857 Dnaaf5 BC053401|C76907|Heatr2 dynein, axonemal assembly factor 5 protein-coding unique_peak2_29_243_-0.522080904965184_7.6696968850803_3.11768798949102-2 chrX 102060094 102061603 + 3.11768798949102 NA intron (NM_001163610, intron 1 of 7) intron (NM_001163610, intron 1 of 7) 10459 NM_001278534 331474 Mm.23297 NM_183318 ENSMUSG00000049191 Rgag4 6430402L03Rik|Mar5|Mart5|mKIAA2001 retrotransposon gag domain containing 4 protein-coding common_peak1_29_243_-0.522080904965184_7.6696968850803_3.11768798949102-2 chr3 51408491 51409027 + 3.11768798949102 NA intron (NM_025523, intron 1 of 3) CpG 196 NM_025523 66377 Mm.331007 NM_025523 ENSMUSG00000037152 Ndufc1 2310016K22Rik|KFYI NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 protein-coding common_peak2_29_243_-0.522080904965184_7.6696968850803_3.11768798949102 chr19 14598403 14599156 + 3.11768798949102 NA promoter-TSS (NM_011600) promoter-TSS (NM_011600) -596 NM_001302947 21888 Mm.103638 NM_011600 ENSMUSG00000024642 Tle4 5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4 transducin-like enhancer of split 4 protein-coding common_peak2_29_243_-0.522080904965184_7.6696968850803_3.11768798949102-2 chr7 47022686 47023757 + 3.11768798949102 NA Intergenic RMER5|LTR|ERV1 -14807 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding common_peak1_29_243_-0.522080904965184_7.6696968850803_3.11768798949102 chr10 40246515 40247057 + 3.11768798949102 NA 5' UTR (NM_001042556, exon 1 of 10) 5' UTR (NM_001042556, exon 1 of 10) 193 NM_001042556 67239 Mm.11480 NM_023323 ENSMUSG00000038510 Rpf2 2810470K21Rik|AU040229|AU043242|Bxdc1 ribosome production factor 2 homolog protein-coding unique_peak2_29_243_-0.522080904965184_7.6696968850803_3.11768798949102 chr6 145303207 145304507 + 3.11768798949102 NA Intergenic Intergenic 53305 NR_045598 100039495 Mm.121014 NR_045598 ENSMUSG00000086013 Gm15706 OTTMUSG00000025463 predicted gene 15706 ncRNA common_peak1_24_202_-0.579320725048793_7.37567555466078_3.11759200280993 chr17 15024347 15024888 + 3.11759200280993 NA Intergenic (CCCCG)n|Simple_repeat|Simple_repeat -14433 NM_198104 21647 Mm.440445 NM_011560 ENSMUSG00000079707 Tcte3 D17Leh117c|LC2|Tcte-3|Tctex-2|Tctex-4|Tctex2|Tctex4 t-complex-associated testis expressed 3 protein-coding common_peak1_24_202_-0.579320725048793_7.37567555466078_3.11759200280993-2 chr3 89214504 89215067 + 3.11759200280993 NA promoter-TSS (NM_013691) promoter-TSS (NM_013691) -402 NM_013691 21827 Mm.2114 NM_013691 ENSMUSG00000028047 Thbs3 TSP3|Thbs-3 thrombospondin 3 protein-coding common_peak1_108_980_-0.246367090689603_9.81492578087444_3.11746106147481 chr18 14656492 14657840 + 3.11746106147481 NA intron (NM_001161371, intron 3 of 8) intron (NM_001161371, intron 3 of 8) 25748 NM_001161369 268996 Mm.31761 NM_009280 ENSMUSG00000037013 Ss18 D130059H17|Ssxt|Syt SS18, nBAF chromatin remodeling complex subunit protein-coding common_peak1_32_127_0.57731994766088_7.28865997383044_3.11719016748286 chr6 54759842 54760546 + 3.11719016748286 NA Intergenic Intergenic -56722 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_73_636_-0.308753599858534_9.16077276232703_3.11677731855181 chr11 119928121 119929498 + 3.11677731855181 NA intron (NR_039557, intron 2 of 2) intron (NR_039557, intron 2 of 2) -14283 NM_001037754 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding common_peak1_74_646_-0.307472193702841_9.18388580514109_3.11652128107567 chr11 40754540 40755488 + 3.11652128107567 NA 5' UTR (NM_009831, exon 1 of 6) 5' UTR (NM_009831, exon 1 of 6) 272 NM_009831 12450 Mm.2103 NM_009831 ENSMUSG00000020326 Ccng1 AI314029 cyclin G1 protein-coding common_peak1_136_1270_-0.215410758470099_10.2040429357699_3.11549775330655 chr4 117189185 117190727 + 3.11549775330655 NA Intergenic U5|snRNA|snRNA -7332 NM_134471 73804 Mm.247651 NM_134471 ENSMUSG00000028678 Kif2c 4930402F02Rik|ESTM5|Knsl6|MCAK|X83316 kinesin family member 2C protein-coding common_peak1_46_389_-0.404199226323593_8.40523070058781_3.11506308252595 chr15 55557212 55558024 + 3.11506308252595 NA promoter-TSS (NM_026759) promoter-TSS (NM_026759) 210 NM_001168250 105837 Mm.390829 NM_134092 ENSMUSG00000022369 Mtbp AI429604|MDM2BP Mdm2, transformed 3T3 cell double minute p53 binding protein protein-coding common_peak1_46_389_-0.404199226323593_8.40523070058781_3.11506308252595-2 chr5 107437774 107438491 + 3.11506308252595 NA exon (NM_001255991, exon 1 of 9) exon (NM_001255991, exon 1 of 9) 135 NM_001255991 100503185 Mm.366650 NM_001255991 ENSMUSG00000111375 Btbd8 EG627196|Gm16115|OTTMUSG00000030610 BTB (POZ) domain containing 8 protein-coding common_peak1_29_110_0.614240566247597_7.1015361494739_3.11469200746871 chr2 167622124 167622796 + 3.11469200746871 NA intron (NM_001311146, intron 1 of 2) intron (NM_001311146, intron 1 of 2) 9545 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak1_29_110_0.614240566247597_7.1015361494739_3.11469200746871-2 chr3 93557524 93558106 + 3.11469200746871 NA intron (NM_009112, intron 1 of 2) intron (NM_009112, intron 1 of 2) 2698 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak1_20_170_-0.6403778710874_7.0976635793422_3.11469200746871 chr1 138166100 138166576 + 3.11469200746871 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 8788 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak2_29_110_0.614240566247597_7.1015361494739_3.11469200746871-2 chr16 52452724 52453785 + 3.11469200746871 NA promoter-TSS (NM_009655) promoter-TSS (NM_009655) -257 NM_009655 11658 Mm.288282 NM_009655 ENSMUSG00000022636 Alcam AI853494|BEN|CD166|DM-GRASP|MuSC|SC1 activated leukocyte cell adhesion molecule protein-coding common_peak2_29_110_0.614240566247597_7.1015361494739_3.11469200746871 chr1 72236544 72237357 + 3.11469200746871 NA Intergenic U2|snRNA|snRNA -24643 NM_001005423 381269 Mm.422636 NM_001005423 ENSMUSG00000039395 Mreg Gm974|Wdt2|dsu melanoregulin protein-coding common_peak2_165_1202_0.203697253178628_10.3342695537654_3.11437398373025 chr5 113619789 113623075 + 3.11437398373025 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 28958 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak1_24_83_0.693697769357623_6.73916630745757_3.11411110165362 chr3 135826111 135826654 + 3.11411110165362 NA 5' UTR (NM_001135149, exon 2 of 9) 5' UTR (NM_001135149, exon 2 of 9) 592 NM_001135150 67547 Mm.30239 NM_026228 ENSMUSG00000053897 Slc39a8 4933419D20Rik|AA986696|BIGM103|ZIP-8|Zip8 solute carrier family 39 (metal ion transporter), member 8 protein-coding unique_peak2_24_83_0.693697769357623_6.73916630745757_3.11411110165362 chr11 115670658 115671387 + 3.11411110165362 NA intron (NM_001313936, intron 2 of 5) intron (NM_001313936, intron 2 of 5) 28512 NM_001313937 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding common_peak1_24_83_0.693697769357623_6.73916630745757_3.11411110165362-2 chr7 120854031 120854616 + 3.11411110165362 NA intron (NM_001267711, intron 1 of 17) PB1D7|SINE|Alu 3134 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak2_102_637_0.27413527001187_9.4544802487708_3.11407885193677 chr16 92795111 92797659 + 3.11407885193677 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 29689 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_113_1031_-0.240116224686723_9.89116914307989_3.11391084315028 chr16 42917555 42921546 + 3.11391084315028 NA intron (NM_001285805, intron 1 of 10) intron (NM_001285805, intron 1 of 10) -7480 NR_040402 100503040 Mm.490721 NR_040402 Gm19522 - predicted gene, 19522 ncRNA common_peak1_95_579_0.287091000449873_9.32345459023987_3.11347939180446 chr13 54610519 54611905 + 3.11347939180446 NA promoter-TSS (NM_028870) promoter-TSS (NM_028870) 60 NM_028870 74325 Mm.290026 NM_028870 ENSMUSG00000047547 Cltb 2310046E19Rik|lcb clathrin, light polypeptide (Lcb) protein-coding common_peak1_47_397_-0.396236841265198_8.43850619991105_3.11337907657194 chr19 29418256 29419242 + 3.11337907657194 NA intron (NM_021396, intron 1 of 5) intron (NM_021396, intron 1 of 5) 7830 NM_021396 58205 Mm.116737 NM_021396 ENSMUSG00000016498 Pdcd1lg2 B7-DC|Btdc|F730015O22Rik|PD-L2 programmed cell death 1 ligand 2 protein-coding common_peak2_187_1416_0.187731666880714_10.5624898763584_3.11261728754043 chr15 81398971 81400863 + 3.11261728754043 NA promoter-TSS (NM_133726) promoter-TSS (NM_133726) -223 NM_133726 70356 Mm.180337 NM_133726 ENSMUSG00000022403 St13 1110007I03Rik|3110002K08Rik|AW555194|HIP|HOP|HSPABP|HSPABP1|PRO0786|SNC6|p48 suppression of tumorigenicity 13 protein-coding common_peak2_86_506_0.306955893662511_9.1393198838346_3.11243682952321 chr7 141561508 141563235 + 3.11243682952321 NA exon (NM_007459, exon 1 of 22) exon (NM_007459, exon 1 of 22) 191 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding common_peak1_72_627_-0.312301722506_9.13846988763863_3.11243682952302 chr7 132575747 132576644 + 3.11243682952302 NA intron (NM_016978, intron 1 of 9) CpG 203 NM_016978 18242 Mm.13694 NM_016978 ENSMUSG00000030934 Oat AI194874|rhg ornithine aminotransferase protein-coding common_peak2_101_628_0.277366881434524_9.43559964759655_3.11049604314079 chr13 33964436 33966202 + 3.11049604314079 NA intron (NM_001163239, intron 1 of 5) intron (NM_001163239, intron 1 of 5) 660 NM_001163241 18105 Mm.264036 NM_020282 ENSMUSG00000046949 Nqo2 NMO2|Nmor2|Ox2 NAD(P)H dehydrogenase, quinone 2 protein-coding common_peak2_147_1033_0.21898780326919_10.1235143719495_3.11033907656053 chr14 100282789 100286465 + 3.11033907656053 NA Intergenic Intergenic -134831 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding common_peak1_70_608_-0.317138872059315_9.09172898187667_3.10967309886656-2 chr7 120917538 120918652 + 3.10967309886656 NA intron (NM_001164096, intron 1 of 19) CpG 351 NM_001164096 26939 Mm.193632 NM_025298 ENSMUSG00000030880 Polr3e RPC5|Sin polymerase (RNA) III (DNA directed) polypeptide E protein-coding common_peak1_70_608_-0.317138872059315_9.09172898187667_3.10967309886656-3 chr7 142381252 142382742 + 3.10967309886656 NA intron (NM_009983, intron 4 of 8) B1_Mur4|SINE|Alu 5873 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak1_70_608_-0.317138872059315_9.09172898187667_3.10967309886656 chr11 101095424 101096213 + 3.10967309886656 NA promoter-TSS (NM_008949) promoter-TSS (NM_008949) -383 NM_008949 19183 Mm.18344 NM_008949 ENSMUSG00000019303 Psmc3ip C79099|GT198|HOP2|Tbpip proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein protein-coding common_peak2_112_1020_-0.240247652705401_9.8756433245251_3.1091778328028 chr15 78499902 78503953 + 3.1091778328028 NA Intergenic Intergenic -6861 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding common_peak1_62_533_-0.339086771735772_8.89115254581967_3.10891270927732 chr10 8196650 8197836 + 3.10891270927732 NA Intergenic Intergenic -241120 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_62_533_-0.339086771735772_8.89115254581967_3.10891270927732-2 chr3 65391714 65392697 + 3.10891270927732 NA intron (NM_026155, intron 1 of 4) intron (NM_026155, intron 1 of 4) 348 NM_026155 67437 Mm.232728 NM_026155 ENSMUSG00000027828 Ssr3 0610038P07Rik|AL022999|AU022074|AW553833|TRAPG signal sequence receptor, gamma protein-coding common_peak1_20_63_0.777474643798498_6.38873732189925_3.10889338723154-5 chrX 104669062 104669605 + 3.10889338723154 NA intron (NM_175358, intron 1 of 11) intron (NM_175358, intron 1 of 11) 1731 NM_175358 108672 Mm.30574 NM_175358 ENSMUSG00000033906 Zdhhc15 6030457O13Rik zinc finger, DHHC domain containing 15 protein-coding common_peak1_20_63_0.777474643798498_6.38873732189925_3.10889338723154-2 chr10 39454334 39454810 + 3.10889338723154 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 84773 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_20_63_0.777474643798498_6.38873732189925_3.10889338723154-3 chr13 5847817 5848247 + 3.10889338723154 NA Intergenic Intergenic 10060 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_20_63_0.777474643798498_6.38873732189925_3.10889338723154-4 chr9 21373078 21373585 + 3.10889338723154 NA intron (NM_001277322, intron 1 of 21) intron (NM_001277322, intron 1 of 21) 4799 NM_001277322 16201 Mm.440026 NM_010561 ENSMUSG00000032178 Ilf3 MBII-26|MPHOSPH4|NF90|NFAR interleukin enhancer binding factor 3 protein-coding common_peak1_20_63_0.777474643798498_6.38873732189925_3.10889338723154 chr10 7949316 7949879 + 3.10889338723154 NA intron (NM_138667, intron 1 of 6) intron (NM_138667, intron 1 of 6) 6526 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak2_61_524_-0.342879096632823_8.86473406423707_3.10863913244085 chr15 76899217 76900662 + 3.10863913244085 NA promoter-TSS (NM_025536) promoter-TSS (NM_025536) -2 NM_025536 66398 Mm.291716 NM_025536 ENSMUSG00000055041 Commd5 2310065H03Rik|AI854466|D15Ertd81e|Hcarg COMM domain containing 5 protein-coding common_peak2_61_524_-0.342879096632823_8.86473406423707_3.10863913244085-2 chr15 83424838 83427736 + 3.10863913244085 NA intron (NM_001159509, intron 1 of 10) intron (NM_001159509, intron 1 of 10) 6563 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_68_589_-0.32197582400241_9.043583232248_3.10836506071806 chr1 180767708 180769141 + 3.10836506071806 NA Intergenic Intergenic 42381 NM_133225 170760 Mm.272981 NM_133225 ENSMUSG00000026499 Acbd3 60kDa|8430407O11Rik|D1Ertd10e|GCP60|GOLPH1|Gocap1|Pap7 acyl-Coenzyme A binding domain containing 3 protein-coding common_peak1_85_498_0.309443476103045_9.11761774338878_3.10835428055329 chr11 101086808 101088021 + 3.10835428055329 NA TTS (NM_001305982) TTS (NM_001305982) 124 NM_001159384 21428 Mm.628 NM_011550 ENSMUSG00000017801 Mlx Tcfl4|Tf4|bHLHd13 MAX-like protein X protein-coding common_peak1_58_296_0.391207284241059_8.4099227629213_3.10680686010399 chr1 13293069 13294188 + 3.10680686010399 NA intron (NM_008678, intron 1 of 22) intron (NM_008678, intron 1 of 22) 78801 NM_001302702 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding common_peak1_58_296_0.391207284241059_8.4099227629213_3.10680686010399-2 chr5 125057584 125058549 + 3.10680686010399 NA intron (NM_001253904, intron 17 of 47) intron (NM_001253904, intron 17 of 47) 54591 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak2_331_2959_0.131349031024749_11.5970559760287_3.10656901739145 chr16 38087674 38091299 + 3.10656901739145 NA promoter-TSS (NR_033221) promoter-TSS (NR_033221) -226 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA common_peak2_122_808_0.245581888788733_9.78278683682434_3.10647313799874 chr19 8018799 8020959 + 3.10647313799874 NA Intergenic Intergenic -53852 NM_134256 171405 Mm.326517 NM_134256 ENSMUSG00000067656 Slc22a27 Oat9|mOAT6-L|mOAT6-S solute carrier family 22, member 27 protein-coding common_peak2_117_1072_-0.235295644528341_9.94978653849235_3.10597489972613 chr17 23563406 23565211 + 3.10597489972613 NA promoter-TSS (NM_001033496) promoter-TSS (NM_001033496) -82 NM_001033496 449521 Mm.268582 NM_001033496 ENSMUSG00000071256 Zfp213 BC038178|D17Ertd197e zinc finger protein 213 protein-coding common_peak1_70_383_0.348197045125861_8.75906102328409_3.10597389488963 chr7 119720068 119720978 + 3.10597389488963 NA exon (NM_145585, exon 1 of 4) exon (NM_145585, exon 1 of 4) 275 NM_145585 233802 Mm.26392 NM_145585 ENSMUSG00000030942 Thumpd1 6330575P11Rik THUMP domain containing 1 protein-coding common_peak2_63_331_0.374438454150955_8.5622586584224_3.1056347325327 chr13 32929002 32930338 + 3.1056347325327 NA Intergenic Lx3C|LINE|L1 -31530 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak1_67_580_-0.325633470057646_9.01957761837571_3.10560410527092 chr5 124046377 124047286 + 3.10560410527092 NA Intergenic Intergenic -14571 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_189_1847_-0.17666693995449_10.7634155714388_3.1055975321993 chr11 107130352 107132280 + 3.1055975321993 NA exon (NM_176850, exon 1 of 28) exon (NM_176850, exon 1 of 28) 606 NM_176850 207165 Mm.343986 NM_176850 ENSMUSG00000040481 Bptf 9430093H17Rik|Falz bromodomain PHD finger transcription factor protein-coding common_peak1_59_303_0.387341230340475_8.44159812861382_3.1053054830131 chr2 112509430 112510445 + 3.1053054830131 NA intron (NM_028844, intron 1 of 5) intron (NM_028844, intron 1 of 5) 16973 NM_028844 74268 Mm.315125 NM_028844 ENSMUSG00000003604 Aven 1700013A01Rik|1700056A21Rik|mAven-L|mAven-S apoptosis, caspase activation inhibitor protein-coding common_peak1_64_552_-0.334221149901811_8.9440250952838_3.10505939657051 chr17 47753555 47754915 + 3.10505939657051 NA intron (NM_001161723, intron 1 of 8) intron (NM_001161723, intron 1 of 8) 16304 NM_001161723 21425 Mm.2305 NM_011549 ENSMUSG00000023990 Tfeb Tcfeb|bHLHe35 transcription factor EB protein-coding common_peak1_64_552_-0.334221149901811_8.9440250952838_3.10505939657051-2 chr19 21945999 21946687 + 3.10505939657051 NA Intergenic MLT1A1|LTR|ERVL-MaLR 168003 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak2_62_324_0.377313252035966_8.5329525339338_3.10467907915188 chr13 113635553 113636708 + 3.10467907915188 NA Intergenic Intergenic -17566 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak1_66_353_0.362938150066727_8.64907462511636_3.10454346718274 chr2 167940766 167941657 + 3.10454346718274 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 8884 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_41_345_-0.430541272651871_8.21935759131079_3.10440014459255 chr12 17376595 17378396 + 3.10440014459255 NA intron (NM_001008421, intron 12 of 20) intron (NM_001008421, intron 12 of 20) 22103 NR_037226 100526470 NR_037226 ENSMUSG00000093037 Mir3066 mir-3066|mmu-mir-3066 microRNA 3066 ncRNA common_peak2_61_317_0.380411560636308_8.50308873560251_3.10428161691777 chr18 57354183 57355570 + 3.10428161691777 NA 5' UTR (NM_028447, exon 1 of 9) 5' UTR (NM_028447, exon 1 of 9) 143 NM_028447 73137 Mm.29889 NM_028447 ENSMUSG00000024594 Prrc1 1190002C06Rik|2310058D16Rik|3110038B19Rik|9430085A19Rik proline-rich coiled-coil 1 protein-coding common_peak1_36_151_0.531856137767825_7.5138555823275_3.10394674197303 chr2 103753925 103754945 + 3.10394674197303 NA intron (NM_153126, intron 3 of 28) RSINE1|SINE|B4 6815 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding unique_peak2_36_151_0.531856137767825_7.5138555823275_3.10394674197303 chr8 34123897 34124793 + 3.10394674197303 NA exon (NM_001126314, exon 3 of 3) exon (NM_001126314, exon 3 of 3) 9315 NM_001126314 234155 Mm.324008 NM_001126314 ENSMUSG00000071113 Mboat4 GOAT|Gm171 membrane bound O-acyltransferase domain containing 4 protein-coding common_peak2_186_1406_0.188511060865491_10.5526621436693_3.10372125380546 chr17 25254779 25259525 + 3.10372125380546 NA promoter-TSS (NM_001163270) promoter-TSS (NM_001163270) -788 NM_001163270 545192 Mm.328859 NM_001163270 ENSMUSG00000047507 Baiap3 Bap3|Gm937 BAI1-associated protein 3 protein-coding common_peak2_100_620_0.278398735384975_9.41764882591297_3.10303098429066 chr5 146948065 146949451 + 3.10303098429066 NA 5' UTR (NM_025652, exon 1 of 9) 5' UTR (NM_025652, exon 1 of 9) 101 NM_025652 66596 Mm.196528 NM_025652 ENSMUSG00000016503 Gtf3a 2010015D03Rik|2610111I01Rik|5330403M05Rik general transcription factor III A protein-coding common_peak2_183_1377_0.189937564948288_10.5233289551784_3.1030142450033 chr11 83019146 83021553 + 3.1030142450033 NA intron (NM_181545, intron 1 of 5) intron (NM_181545, intron 1 of 5) 373 NM_001167743 276950 Mm.491599 NM_181545 ENSMUSG00000035208 Slfn8 - schlafen 8 protein-coding common_peak2_130_1206_-0.220122698908149_10.1271486113009_3.10280637346519 chr1 152596954 152600686 + 3.10280637346519 NA intron (NM_016846, intron 2 of 17) intron (NM_016846, intron 2 of 17) 26291 NM_016846 19731 Mm.245270 NM_016846 ENSMUSG00000026482 Rgl1 Rgl|mKIAA0959 ral guanine nucleotide dissociation stimulator,-like 1 protein-coding common_peak2_27_226_-0.53998373727299_7.55655661865442_3.10222829764072 chr11 77385570 77386610 + 3.10222829764072 NA intron (NM_001291190, intron 1 of 13) intron (NM_001291190, intron 1 of 13) 37810 NM_001291190 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot homolog 2 (Drosophila) protein-coding unique_peak2_22_73_0.72900743846456_6.57395708486123_3.1016166557742 chr10 39417169 39417803 + 3.1016166557742 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 47687 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_22_73_0.72900743846456_6.57395708486123_3.1016166557742-2 chr6 119346288 119346925 + 3.1016166557742 NA intron (NM_001033382, intron 34 of 37) intron (NM_001033382, intron 34 of 37) -15840 NM_172492 211187 Mm.121498 NM_172492 ENSMUSG00000055003 Lrtm2 A230084J22|AI841794 leucine-rich repeats and transmembrane domains 2 protein-coding common_peak2_22_73_0.72900743846456_6.57395708486123_3.1016166557742 chr2 93759136 93759718 + 3.1016166557742 NA intron (NM_010163, intron 8 of 13) intron (NM_010163, intron 8 of 13) 63141 NM_010163 14043 Mm.4336 NM_010163 ENSMUSG00000027198 Ext2 AI893565 exostoses (multiple) 2 protein-coding common_peak1_22_73_0.72900743846456_6.57395708486123_3.1016166557742-3 chr7 128118621 128119230 + 3.1016166557742 NA TTS (NM_008401) TTS (NM_008401) -10643 NM_021334 16411 Mm.22378 NM_021334 ENSMUSG00000030789 Itgax AI449405|Cd11c|Cr4|N418 integrin alpha X protein-coding common_peak1_22_73_0.72900743846456_6.57395708486123_3.1016166557742 chr2 3657185 3657705 + 3.1016166557742 NA Intergenic B3|SINE|B2 -56013 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_121_1113_-0.230401755106703_10.0063326397867_3.1005466707822 chr4 88721396 88723075 + 3.1005466707822 NA 5' UTR (NM_172871, exon 1 of 1) 5' UTR (NM_172871, exon 1 of 1) 273 NM_172871 242521 Mm.260601 NM_172871 ENSMUSG00000070923 Klhl9 8030469P05|C530050O22Rik|ENSMUSG00000070923|mKIAA1354 kelch-like 9 protein-coding common_peak1_364_3342_0.123496973646546_11.7686761264407_3.10018036753286 chr15 89428731 89430847 + 3.10018036753286 NA non-coding (NR_004843, exon 1 of 27) non-coding (NR_004843, exon 1 of 27) 138 NR_037154 12651 Mm.485045 NM_007692 ENSMUSG00000022617 Chkb Chetk|Chkl|Ck|Ck/Ek|Ck/Ek-beta|Ckb|Ckekb|Ek choline kinase beta protein-coding common_peak2_153_1451_-0.200491886036328_10.4035797949776_3.10008603272355 chr6 119174675 119177455 + 3.10008603272355 NA intron (NM_001033379, intron 1 of 8) intron (NM_001033379, intron 1 of 8) 812 NM_001033379 319618 Mm.250197 NM_001033379 ENSMUSG00000041477 Dcp1b B930050E02Rik decapping mRNA 1B protein-coding unique_peak2_42_353_-0.421878379829046_8.25666636016847_3.09849880736704 chr16 84712549 84714457 + 3.09849880736704 NA promoter-TSS (NR_029565) promoter-TSS (NR_029565) 480 NR_132106 100653389 Mm.261808 NR_132106 ENSMUSG00000097418 Mir155hg Bic|Gm26667 Mir155 host gene (non-protein coding) ncRNA common_peak1_82_722_-0.288345967782769_9.35367885305973_3.09844141936061 chr7 144914787 144915782 + 3.09844141936061 NA promoter-TSS (NM_028184) promoter-TSS (NM_028184) 90 NM_028184 72284 Mm.273049 NM_028184 ENSMUSG00000031072 Oraov1 2210010N10Rik|TAOS1 oral cancer overexpressed 1 protein-coding common_peak1_163_1559_-0.192662426311472_10.5109991005939_3.09807515810152 chr12 85597944 85599955 + 3.09807515810152 NA promoter-TSS (NM_030887) promoter-TSS (NM_030887) -156 NM_001205052 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding unique_peak2_17_146_-0.694986982963697_6.85217885335452_3.09806460938018-2 chr9 56325349 56326557 + 3.09806460938018 NA intron (NM_172924, intron 2 of 6) intron (NM_172924, intron 2 of 6) 92097 NM_172924 244895 Mm.490331 NM_172924 ENSMUSG00000074305 Peak1 1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002 pseudopodium-enriched atypical kinase 1 protein-coding unique_peak2_17_146_-0.694986982963697_6.85217885335452_3.09806460938018 chr11 89023449 89024163 + 3.09806460938018 NA Intergenic Intergenic 24403 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding common_peak2_17_146_-0.694986982963697_6.85217885335452_3.09806460938018 chr2 118598044 118598799 + 3.09806460938018 NA 5' UTR (NM_009773, exon 1 of 23) 5' UTR (NM_009773, exon 1 of 23) 210 NM_009773 12236 Mm.29133 NM_009773 ENSMUSG00000040084 Bub1b AU045529|BUBR1 BUB1B, mitotic checkpoint serine/threonine kinase protein-coding common_peak1_17_146_-0.694986982963697_6.85217885335452_3.09806460938018 chr15 27923288 27923748 + 3.09806460938018 NA intron (NM_001081302, intron 1 of 56) intron (NM_001081302, intron 1 of 56) 102330 NM_001081302 223435 Mm.485422 NM_001081302 ENSMUSG00000022263 Trio 6720464I07Rik|AA408740|Solo triple functional domain (PTPRF interacting) protein-coding common_peak2_37_310_-0.453794255547357_8.05387364235692_3.09794091802382 chr10 85410537 85412303 + 3.09794091802382 NA intron (NM_028709, intron 1 of 16) intron (NM_028709, intron 1 of 16) 24606 NM_028709 74007 Mm.36544 NM_028709 ENSMUSG00000020042 Btbd11 6330404E16Rik BTB (POZ) domain containing 11 protein-coding common_peak2_142_988_0.222363635823317_10.0610085286708_3.09734810435428 chr5 122421487 122423269 + 3.09734810435428 NA promoter-TSS (NM_019805) promoter-TSS (NM_019805) -66 NM_019805 56317 Mm.37341 NM_019805 ENSMUSG00000029466 Anapc7 APC7|AW545589 anaphase promoting complex subunit 7 protein-coding common_peak2_41_182_0.488387116700812_7.75989339663445_3.09707901528667 chr4 148040842 148042299 + 3.09707901528667 NA intron (NM_001161798, intron 1 of 11) intron (NM_001161798, intron 1 of 11) 381 NM_001161798 17769 Mm.89959 NM_010840 ENSMUSG00000029009 Mthfr AI323986 5,10-methylenetetrahydrofolate reductase protein-coding common_peak2_99_612_0.279496550818314_9.39949153909994_3.09569951114329 chr13 54610173 54612003 + 3.09569951114329 NA exon (NM_028870, exon 1 of 5) exon (NM_028870, exon 1 of 5) 184 NM_028870 74325 Mm.290026 NM_028870 ENSMUSG00000047547 Cltb 2310046E19Rik|lcb clathrin, light polypeptide (Lcb) protein-coding common_peak1_99_612_0.279496550818314_9.39949153909994_3.09569951114329 chr17 36957981 36959107 + 3.09569951114329 NA promoter-TSS (NM_023162) promoter-TSS (NM_023162) -48 NM_029602 76416 Mm.26684 NM_029602 ENSMUSG00000036214 Znrd1as 1700022C21Rik|AI746295|Znrd1-as zinc ribbon domain containing 1, antisense protein-coding common_peak1_714_7852_0.0812677516974958_12.979662057612_3.0955054110765 chr2 93457447 93462515 + 3.0955054110765 NA intron (NR_040532, intron 2 of 4) intron (NR_040532, intron 2 of 4) 1870 NM_001271461 12521 Mm.4261 NM_007656 ENSMUSG00000027215 Cd82 AA682076|AL023070|C33|IA4|Kai1|Tspan27 CD82 antigen protein-coding unique_peak2_6_63_-1.16665987235478_5.41667006382261_3.09530603560454 chr3 52633817 52634412 + 3.09530603560454 NA Intergenic Intergenic -105610 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak1_176_1309_0.194309824770297_10.45250600881_3.09483628522229 chr5 108628855 108630236 + 3.09483628522229 NA promoter-TSS (NM_001163532) promoter-TSS (NM_001163532) 232 NM_153569 231580 Mm.276647 NM_153569 ENSMUSG00000062234 Gak D130045N16Rik cyclin G associated kinase protein-coding common_peak2_149_1052_0.216472298450308_10.1485258702509_3.0946981154671 chr9 99139101 99141160 + 3.0946981154671 NA promoter-TSS (NM_029094) promoter-TSS (NM_029094) 81 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak2_98_879_-0.259905249710496_9.65140708866941_3.09456037097088 chr10 117905017 117907167 + 3.09456037097088 NA Intergenic Intergenic -19367 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_30_251_-0.51059771876561_7.72198106411711_3.09330723999063 chr6 140231651 140232380 + 3.09330723999063 NA Intergenic ORR1D2|LTR|ERVL-MaLR 190490 NM_007605 12344 Mm.12817 NM_007605 ENSMUSG00000041791 Capza3 510-4|Cappa3|Gsg3|Tex8|repro32 capping protein (actin filament) muscle Z-line, alpha 3 protein-coding common_peak2_572_5935_0.0932306455192773_12.5818906993804_3.09147071645268 chr6 99257085 99266985 + 3.09147071645268 NA intron (NM_053202, intron 2 of 18) intron (NM_053202, intron 2 of 18) 4480 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_27_99_0.642708560243201_6.96521046989633_3.09125448777416 chr16 44189765 44190556 + 3.09125448777416 NA intron (NM_001029889, intron 1 of 7) MLT1B|LTR|ERVL-MaLR 16763 NM_001029889 207806 Mm.310566 NM_001029889 ENSMUSG00000068284 Usf3 5530400K22Rik|Gm1779|Gm608|mKIAA2018 upstream transcription factor family member 3 protein-coding common_peak1_27_99_0.642708560243201_6.96521046989633_3.09125448777416 chr2 19300427 19300796 + 3.09125448777416 NA exon (NM_001081083, exon 18 of 20) exon (NM_001081083, exon 18 of 20) -43706 NR_126563 108871 Mm.107666 NR_126563 4930447M23Rik - RIKEN cDNA 4930447M23 gene ncRNA common_peak2_27_99_0.642708560243201_6.96521046989633_3.09125448777416 chr17 26531086 26531886 + 3.09125448777416 NA Intergenic B4A|SINE|B4 -23014 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding unique_peak2_33_133_0.564059381702755_7.34811888130915_3.09086854108446 chr17 83631393 83632351 + 3.09086854108446 NA promoter-TSS (NM_153512) promoter-TSS (NM_153512) 23 NM_153512 225030 Mm.223506 NM_153512 ENSMUSG00000045053 Kcng3 KV6.3|Kv10.1a|Kv10.1b potassium voltage-gated channel, subfamily G, member 3 protein-coding common_peak1_19_161_-0.648715775253848_7.0154921152577_3.09071234308021 chr15 97422349 97422751 + 3.09071234308021 NA Intergenic Intergenic -175263 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_19_161_-0.648715775253848_7.0154921152577_3.09071234308021-2 chr8 72330444 72330860 + 3.09071234308021 NA Intergenic Intergenic 11590 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_50_424_-0.383648253897608_8.53949490407626_3.08964001734145-3 chr7 100159104 100159946 + 3.08964001734145 NA exon (NM_026010, exon 1 of 2) exon (NM_026010, exon 1 of 2) 248 NM_026010 67164 Mm.46777 NM_026010 ENSMUSG00000030725 Lipt2 2610209A20Rik lipoyl(octanoyl) transferase 2 (putative) protein-coding common_peak1_50_424_-0.383648253897608_8.53949490407626_3.08964001734145-2 chr11 107431418 107432388 + 3.08964001734145 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 38817 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_50_424_-0.383648253897608_8.53949490407626_3.08964001734145 chr11 60699485 60700379 + 3.08964001734145 NA exon (NM_001159405, exon 1 of 22) exon (NM_001159405, exon 1 of 22) 242 NM_008502 16897 Mm.285453 NM_008502 ENSMUSG00000020536 Llgl1 AI325176|Lgl1|Llglh|Mgl1 lethal giant larvae homolog 1 (Drosophila) protein-coding common_peak1_81_467_0.317690856668378_9.02921014791759_3.08951206828879 chr15 78842066 78843395 + 3.08951206828879 NA promoter-TSS (NM_027219) promoter-TSS (NM_027219) 83 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak2_81_467_0.317690856668378_9.02921014791759_3.08951206828879 chr13 52985333 52987405 + 3.08951206828879 NA Intergenic Intergenic -5330 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_91_547_0.293653343505696_9.24485875471338_3.0892965578066-2 chr15 98761944 98763199 + 3.0892965578066 NA intron (NM_007478, intron 1 of 4) CpG 547 NM_007478 11842 Mm.221298 NM_007478 ENSMUSG00000051853 Arf3 5430400P17Rik|AI854770 ADP-ribosylation factor 3 protein-coding common_peak1_91_547_0.293653343505696_9.24485875471338_3.0892965578066 chr1 180941976 180943099 + 3.0892965578066 NA promoter-TSS (NM_144794) promoter-TSS (NM_144794) 19 NM_144794 208795 Mm.185518 NM_144794 ENSMUSG00000026519 Tmem63a BC014795|Tmem64a transmembrane protein 63a protein-coding common_peak2_42_188_0.483484746032878_7.80398479723751_3.08912785624582 chr6 134916462 134917558 + 3.08912785624582 NA Intergenic Intergenic -3391 NM_009875 12576 Mm.2958 NM_009875 ENSMUSG00000003031 Cdkn1b AA408329|AI843786|Kip1|p27|p27Kip1 cyclin-dependent kinase inhibitor 1B protein-coding common_peak1_129_871_0.235342506742326_9.88585557814809_3.08841739474104 chr4 129671658 129673270 + 3.08841739474104 NA intron (NM_008468, intron 1 of 13) CpG 303 NM_008468 16650 Mm.202358 NM_008468 ENSMUSG00000003731 Kpna6 IPOA7|Kpna5|NPI-2 karyopherin (importin) alpha 6 protein-coding common_peak1_155_1472_-0.198373643055275_10.4253548935082_3.08797316345251 chr6 113648633 113650682 + 3.08797316345251 NA intron (NM_001113553, intron 2 of 11) intron (NM_001113553, intron 2 of 11) 11190 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding common_peak1_316_2789_0.134865551542299_11.5134821824877_3.08785639127243 chr15 76079749 76081643 + 3.08785639127243 NA intron (NM_028364, intron 1 of 11) CpG 174 NM_001164600 67959 Mm.29965 NM_028364 ENSMUSG00000002524 Puf60 2410104I19Rik|2810454F19Rik|SIAHBP1 poly-U binding splicing factor 60 protein-coding common_peak1_49_234_0.436110556757741_8.09457222494387_3.087551484687 chr3 108591338 108592187 + 3.087551484687 NA intron (NM_181400, intron 1 of 14) CpG 484 NM_181400 99512 Mm.285968 NM_181400 ENSMUSG00000040389 Wdr47 1810073M12Rik|AA552998|mKIAA0893 WD repeat domain 47 protein-coding common_peak2_37_157_0.523195766406143_7.56537863138017_3.08747318458951 chr15 99471305 99472429 + 3.08747318458951 NA intron (NM_029236, intron 1 of 1) intron (NM_029236, intron 1 of 1) 2863 NM_029236 75284 Mm.32826 NM_029236 ENSMUSG00000037525 Bcdin3d 4930556P03Rik|AV138748 BCDIN3 domain containing protein-coding common_peak1_89_790_-0.274742935721804_9.49016241661189_3.08656622862468 chr6 128887256 128888967 + 3.08656622862468 NA intron (NM_001289706, intron 2 of 6) intron (NM_001289706, intron 2 of 6) 524 NM_020257 93675 Mm.391513 NM_020257 ENSMUSG00000030365 Clec2i Clr-g|Clrg|Dcl1|LCL-1|OCILrP2 C-type lectin domain family 2, member i protein-coding common_peak1_246_2503_-0.150649728460895_11.2146939827022_3.08604581495196 chr10 93165090 93168912 + 3.08604581495196 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 4216 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak2_78_683_-0.295753423772581_9.26997580299961_3.08601934408275 chr14 30478857 30480459 + 3.08601934408275 NA promoter-TSS (NM_133761) promoter-TSS (NM_133761) 93 NM_133761 75901 Mm.28733 NM_133761 ENSMUSG00000021962 Dcp1a 1110066A22Rik|4930568L04Rik|AU019772|D14Ertd817e|Mitc1|SMIF decapping mRNA 1A protein-coding unique_peak2_52_441_-0.37216079394832_8.60182216241727_3.08546690385443 chr13 52541553 52543376 + 3.08546690385443 NA Intergenic Intergenic -11628 NM_001024474 68203 Mm.29362 NM_001024474 ENSMUSG00000047842 Diras2 2900052J15Rik|AI414999 DIRAS family, GTP-binding RAS-like 2 protein-coding common_peak1_43_362_-0.417415684115443_8.29511789593803_3.08470217991765 chr12 21480470 21481198 + 3.08470217991765 NA Intergenic (CAGAGA)n|Simple_repeat|Simple_repeat -63398 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak2_151_1429_-0.201598294709795_10.3810002843109_3.08359975292936 chr6 86546560 86549585 + 3.08359975292936 NA intron (NR_037960, intron 3 of 4) intron (NR_037960, intron 3 of 4) 20671 NR_037961 72012 Mm.349174 NR_037960 ENSMUSG00000097048 1600020E01Rik - RIKEN cDNA 1600020E01 gene ncRNA unique_peak1_14_36_0.972590755782398_5.69574874352015_3.08327006392557 chr15 64047418 64047862 + 3.08327006392557 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 12808 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_14_36_0.972590755782398_5.69574874352015_3.08327006392557 chr2 118302612 118302978 + 3.08327006392557 NA intron (NM_201367, intron 1 of 2) intron (NM_201367, intron 1 of 2) -2119 NR_045919 73358 Mm.437192 NR_045919 ENSMUSG00000085889 1700054M17Rik - RIKEN cDNA 1700054M17 gene ncRNA unique_peak2_13_115_-0.798028556296002_6.45896671697957_3.08276001484571 chr8 36129884 36130854 + 3.08276001484571 NA intron (NM_172911, intron 4 of 5) intron (NM_172911, intron 4 of 5) 35541 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak2_88_780_-0.276160369377791_9.47109855345308_3.08239816420573 chr8 85080046 85082283 + 3.08239816420573 NA promoter-TSS (NM_026399) promoter-TSS (NM_026399) 201 NM_001001493 414077 Mm.35790 NM_001001493 ENSMUSG00000059355 Wdr83os - WD repeat domain 83 opposite strand protein-coding unique_peak2_23_193_-0.586137374095033_7.30684415513961_3.08173118051183 chr2 144711312 144712449 + 3.08173118051183 NA intron (NM_025314, intron 4 of 5) intron (NM_025314, intron 4 of 5) -111786 NM_025490 66328 Mm.45377 NM_025490 ENSMUSG00000027431 Scp2d1 1700010M22Rik SCP2 sterol-binding domain containing 1 protein-coding common_peak1_23_193_-0.586137374095033_7.30684415513961_3.08173118051183-2 chr9 32708882 32709349 + 3.08173118051183 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 13073 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_23_193_-0.586137374095033_7.30684415513961_3.08173118051183 chr7 88205811 88206385 + 3.08173118051183 NA Intergenic Lx2|LINE|L1 -71987 NM_009982 13032 Mm.89295 NM_009982 ENSMUSG00000030560 Ctsc AI047818|CatC|DPP1|DPPI cathepsin C protein-coding common_peak1_279_2897_-0.139559231474326_11.4310622638198_3.08149396890169 chr6 30047150 30049079 + 3.08149396890169 NA intron (NM_001164228, intron 1 of 10) CpG 126 NM_001164226 18181 Mm.259258 NM_010938 ENSMUSG00000058440 Nrf1 C87038|D6Ertd415e nuclear respiratory factor 1 protein-coding common_peak1_97_596_0.281901426832235_9.36253783468092_3.08145798909657 chr1 88575546 88576626 + 3.08145798909657 NA Intergenic Intergenic 24569 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA common_peak1_44_370_-0.409096739056171_8.33072700709272_3.08089957626984 chr8 25017228 25017875 + 3.08089957626984 NA promoter-TSS (NM_007404) promoter-TSS (NM_007404) 340 NM_027194 69742 Mm.28626 NM_027194 ENSMUSG00000031556 Tm2d2 2410018G23Rik|Blp1 TM2 domain containing 2 protein-coding common_peak2_44_370_-0.409096739056171_8.33072700709272_3.08089957626984 chr4 133878682 133880161 + 3.08089957626984 NA intron (NM_009097, intron 2 of 21) intron (NM_009097, intron 2 of 21) -4690 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding unique_peak1_17_49_0.860829172097943_6.0742707758237_3.07967901628471 chr4 149681042 149681502 + 3.07967901628471 NA intron (NM_001029837, intron 1 of 23) B1_Mus1|SINE|Alu -5183 NM_001164051 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_17_49_0.860829172097943_6.0742707758237_3.07967901628471-2 chr8 70809234 70809690 + 3.07967901628471 NA intron (NM_008353, intron 1 of 15) intron (NM_008353, intron 1 of 15) 1013 NM_008353 16161 Mm.731 NM_008353 ENSMUSG00000000791 Il12rb1 CD212|IL-12R[b] interleukin 12 receptor, beta 1 protein-coding common_peak1_17_49_0.860829172097943_6.0742707758237_3.07967901628471 chr12 25455378 25455777 + 3.07967901628471 NA Intergenic Intergenic 326403 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_113_1030_-0.238717586631578_9.89046982405232_3.07961384042025 chr2 150644551 150647808 + 3.07961384042025 NA intron (NM_080575, intron 2 of 13) RMER15|LTR|ERVL -21315 NR_040331 109344 Mm.440012 NR_040331 ENSMUSG00000087406 E130215H24Rik - RIKEN cDNA E130215H24 gene ncRNA unique_peak2_25_210_-0.565677944066254_7.43826021667406_3.07925271477473 chr13 35748404 35749804 + 3.07925271477473 NA intron (NM_001123386, intron 1 of 6) Lx9|LINE|L1 7702 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding unique_peak2_21_177_-0.615935688272446_7.16776558683017_3.07900085781863 chr15 97424012 97425141 + 3.07900085781863 NA Intergenic Intergenic -177289 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_21_177_-0.615935688272446_7.16776558683017_3.07900085781863-2 chr2 164867037 164867574 + 3.07900085781863 NA Intergenic Intergenic -9597 NM_011125 18830 Mm.6105 NM_011125 ENSMUSG00000017754 Pltp Bpife|OD107 phospholipid transfer protein protein-coding common_peak1_21_177_-0.615935688272446_7.16776558683017_3.07900085781863 chr13 55014320 55014698 + 3.07900085781863 NA exon (NM_001206392, exon 4 of 18) exon (NM_001206392, exon 4 of 18) 6310 NM_001206390 212032 Mm.267479 NM_001033245 ENSMUSG00000025877 Hk3 HK III|HK-III hexokinase 3 protein-coding unique_peak2_21_177_-0.615935688272446_7.16776558683017_3.07900085781863-2 chrX 164419749 164420498 + 3.07900085781863 NA intron (NM_011081, intron 1 of 5) intron (NM_011081, intron 1 of 5) 336 NM_011081 18700 Mm.3781 NM_011081 ENSMUSG00000031381 Piga AI194334|Pig-a phosphatidylinositol glycan anchor biosynthesis, class A protein-coding common_peak1_30_116_0.596317485150902_7.16852346215886_3.07900085781863-3 chr4 106678214 106679001 + 3.07900085781863 NA promoter-TSS (NM_001172073) promoter-TSS (NM_001172073) 79 NM_001172073 72354 Mm.25806 NM_028209 ENSMUSG00000025413 Ttc4 2810002P21Rik|AF007005|L62 tetratricopeptide repeat domain 4 protein-coding common_peak1_30_116_0.596317485150902_7.16852346215886_3.07900085781863 chr12 24823128 24823761 + 3.07900085781863 NA Intergenic Intergenic -8155 NM_026037 67216 Mm.167671 NM_026037 ENSMUSG00000020646 Mboat2 2810049G06Rik|AU022889|AW547221|LPCAT4|Moact2|Oact2 membrane bound O-acyltransferase domain containing 2 protein-coding common_peak1_30_116_0.596317485150902_7.16852346215886_3.07900085781863-2 chr17 32536275 32536848 + 3.07900085781863 NA promoter-TSS (NM_024442) promoter-TSS (NM_024442) -68 NM_024442 70101 Mm.30504 NM_024442 ENSMUSG00000048440 Cyp4f16 2310021J05Rik|AI746515 cytochrome P450, family 4, subfamily f, polypeptide 16 protein-coding common_peak2_50_241_0.428807539852862_8.13326700720103_3.07848802755477 chr9 13819976 13821535 + 3.07848802755477 NA intron (NM_001310721, intron 2 of 9) B4|SINE|B4 6298 NR_037622 74360 Mm.157212 NM_026665 ENSMUSG00000031922 Cep57 3110002L15Rik|4921510P06Rik|4931428M20Rik|AI467480|Tsp57|mKIAA0092 centrosomal protein 57 protein-coding common_peak1_87_770_-0.277564684848372_9.45180470749085_3.0784269529935 chr15 73156709 73158135 + 3.0784269529935 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 27525 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak2_150_1417_-0.201121432253965_10.3690811011125_3.07750381586157 chr12 8640247 8641750 + 3.07750381586157 NA Intergenic CpG -33136 NM_001160221 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding common_peak2_54_459_-0.36419903255846_8.66339053466515_3.07691272797765 chr7 72268707 72270196 + 3.07691272797765 NA intron (NM_001024703, intron 1 of 22) Lx9|LINE|L1 37144 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak1_54_459_-0.36419903255846_8.66339053466515_3.07691272797765 chr9 108146650 108147505 + 3.07691272797765 NA intron (NM_007567, intron 1 of 11) intron (NM_007567, intron 1 of 11) 10222 NR_126077 76873 Mm.436935 NR_126077 ENSMUSG00000102224 4930447F24Rik - RIKEN cDNA 4930447F24 gene ncRNA common_peak2_186_1407_0.187486055464728_10.5531746463697_3.07439663115883 chr2 25223336 25225860 + 3.07439663115883 NA 5' UTR (NM_146116, exon 1 of 4) 5' UTR (NM_146116, exon 1 of 4) 104 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding common_peak2_55_468_-0.360267051311094_8.69331058685983_3.07368497720925 chr10 117863605 117865507 + 3.07368497720925 NA Intergenic Intergenic -18582 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding unique_peak2_28_234_-0.527853632052431_7.61259013053878_3.07319724112638 chr17 88755529 88757119 + 3.07319724112638 NA intron (NM_013582, intron 7 of 10) intron (NM_013582, intron 7 of 10) 35652 NM_013582 16867 Mm.1644 NM_013582 ENSMUSG00000024107 Lhcgr Gpcr19-rs1|LH-R|Lhr luteinizing hormone/choriogonadotropin receptor protein-coding common_peak1_38_163_0.515391444989777_7.61524772711297_3.07319724112633 chr15 80635446 80636115 + 3.07319724112633 NA intron (NM_001289442, intron 3 of 7) intron (NM_001289442, intron 3 of 7) -10293 NR_105922 102466773 NR_105922 ENSMUSG00000098631 Mir6957 Gm27895|mmu-mir-6957 microRNA 6957 ncRNA common_peak1_73_635_-0.306486992886589_9.15963945884106_3.07314077471469 chr9 123151434 123152607 + 3.07314077471469 NA intron (NM_011606, intron 1 of 2) ID_B1|SINE|B4 1074 NM_011606 21922 Mm.34588 NM_011606 ENSMUSG00000025784 Clec3b Tna C-type lectin domain family 3, member b protein-coding common_peak1_31_259_-0.49950223871693_7.77261669366999_3.07158568878679 chr2 73345889 73346381 + 3.07158568878679 NA intron (NM_001276443, intron 16 of 16) intron (NM_001276443, intron 16 of 16) 33483 NM_029022 74616 Mm.247457 NM_029022 ENSMUSG00000008226 Scrn3 4833415E20Rik|AI427019|AV002033|Ses3 secernin 3 protein-coding common_peak1_12_107_-0.826078568708891_6.34184821780902_3.07129408524205 chr2 65337788 65338121 + 3.07129408524205 NA intron (NM_177074, intron 7 of 11) intron (NM_177074, intron 7 of 11) 26072 NM_177074 320106 Mm.227703 NM_177074 ENSMUSG00000061171 Slc38a11 9330158F14Rik solute carrier family 38, member 11 protein-coding unique_peak2_12_107_-0.826078568708891_6.34184821780902_3.07129408524205 chr14 32093402 32094338 + 3.07129408524205 NA intron (NM_145460, intron 3 of 7) MIR|SINE|MIR 8142 NM_145460 218885 Mm.202257 NM_145460 ENSMUSG00000021906 Oxnad1 2410002F01Rik|AW492292|BC019806 oxidoreductase NAD-binding domain containing 1 protein-coding common_peak2_85_750_-0.280329616073967_9.41250428947729_3.07110799120855 chr11 9530448 9532789 + 3.07110799120855 NA intron (NM_178259, intron 45 of 61) intron (NM_178259, intron 45 of 61) 339676 NM_178259 268379 Mm.39270 NM_178259 ENSMUSG00000004668 Abca13 9830132L24|A930002G16Rik|AI956815 ATP-binding cassette, sub-family A (ABC1), member 13 protein-coding common_peak1_142_1332_-0.208270718506546_10.2763257058357_3.0709350497492 chrX 170008191 170009936 + 3.0709350497492 NA Intergenic Intergenic -30146 NR_029457 654820 Mm.34441 NM_001039559 ENSMUSG00000072844 G530011O06Rik - RIKEN cDNA G530011O06 gene ncRNA common_peak2_138_1289_-0.211170569518014_10.2275700655516_3.07091139618406 chr4 117188953 117190820 + 3.07091139618406 NA Intergenic Intergenic -7262 NM_134471 73804 Mm.247651 NM_134471 ENSMUSG00000028678 Kif2c 4930402F02Rik|ESTM5|Knsl6|MCAK|X83316 kinesin family member 2C protein-coding common_peak2_43_195_0.471700209765099_7.85055994899776_3.07054585936179 chr3 96904694 96905823 + 3.07054585936179 NA promoter-TSS (NM_026229) promoter-TSS (NM_026229) 40 NM_026229 67549 Mm.46722 NM_026229 ENSMUSG00000028096 Gpr89 4933412D19Rik|Gpr89a|SH120 G protein-coupled receptor 89 protein-coding common_peak1_35_292_-0.463459181363225_7.96302726374064_3.07015258159909 chr2 32520339 32520917 + 3.07015258159909 NA Intergenic Intergenic -14731 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak2_149_1406_-0.201644593760509_10.3575843163563_3.06935555945079 chr6 128424083 128425404 + 3.06935555945079 NA exon (NM_133927, exon 1 of 12) exon (NM_133927, exon 1 of 12) 167 NM_133927 101142 Mm.31345 NM_133927 ENSMUSG00000001518 Itfg2 2700050P07Rik|AI646725 integrin alpha FG-GAP repeat containing 2 protein-coding unique_peak2_11_99_-0.856693032868985_6.21550967334023_3.06929050644263 chr5 118359623 118360244 + 3.06929050644263 NA Intergenic Intergenic 114706 NM_001081236 76792 Mm.103428 NM_001081236 ENSMUSG00000032840 2410131K14Rik - RIKEN cDNA 2410131K14 gene protein-coding common_peak1_11_99_-0.856693032868985_6.21550967334023_3.06929050644263 chr7 27688751 27689079 + 3.06929050644263 NA promoter-TSS (NM_001112731) promoter-TSS (NM_001112731) -425 NM_001112731 112415 Mm.145362 NM_198417 ENSMUSG00000057093 Zfp607b C030039L03Rik zinc finger protein 607B protein-coding unique_peak2_57_486_-0.352502336383417_8.75152679389063_3.06912131834686 chr3 52395233 52397480 + 3.06912131834686 NA Intergenic Intergenic 128019 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_19_58_0.808491178268935_6.28688863849631_3.06895102772022-4 chr9 41113859 41114306 + 3.06895102772022 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) 43412 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak1_19_58_0.808491178268935_6.28688863849631_3.06895102772022-3 chr17 48467875 48468340 + 3.06895102772022 NA 3' UTR (NM_152823, exon 9 of 9) 3' UTR (NM_152823, exon 9 of 9) 13206 NM_152823 76589 Mm.311629 NM_152823 ENSMUSG00000043592 Unc5cl 2510009H09Rik|BB155270|Zud unc-5 family C-terminal like protein-coding common_peak1_19_58_0.808491178268935_6.28688863849631_3.06895102772022 chr10 7831936 7832265 + 3.06895102772022 NA promoter-TSS (NM_172785) promoter-TSS (NM_172785) -370 NM_172785 237256 Mm.140055 NM_172785 ENSMUSG00000039981 Zc3h12d D730019B10Rik|TFL zinc finger CCCH type containing 12D protein-coding common_peak1_19_58_0.808491178268935_6.28688863849631_3.06895102772022-2 chr10 67503547 67504041 + 3.06895102772022 NA Intergenic Intergenic -34075 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding unique_peak1_19_58_0.808491178268935_6.28688863849631_3.06895102772022 chr17 70728460 70728944 + 3.06895102772022 NA intron (NM_001128181, intron 5 of 9) intron (NM_001128181, intron 5 of 9) 118075 NM_001164077 21815 Mm.101034 NM_009372 ENSMUSG00000047407 Tgif1 AA959811|AI462167|Tgif TGFB-induced factor homeobox 1 protein-coding unique_peak1_19_58_0.808491178268935_6.28688863849631_3.06895102772022-2 chr2 31707636 31708259 + 3.06895102772022 NA intron (NM_001283047, intron 2 of 11) intron (NM_001283047, intron 2 of 11) 19410 NM_001283046 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak2_87_515_0.301795109643409_9.16212481024496_3.06830601562067 chr11 100840512 100842851 + 3.06830601562067 NA intron (NM_001113563, intron 1 of 18) B1F|SINE|Alu 8904 NM_001113563 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding common_peak1_87_515_0.301795109643409_9.16212481024496_3.06830601562067 chr7 110955775 110956881 + 3.06830601562067 NA intron (NM_194464, intron 1 of 20) intron (NM_194464, intron 1 of 20) -10141 NM_010826 17540 Mm.250023 NM_010826 ENSMUSG00000005611 Mrvi1 BB115629|Irag|Ris1 MRV integration site 1 protein-coding common_peak2_76_429_0.328528691183607_8.91245719518126_3.06816448351989 chr2 173274527 173276624 + 3.06816448351989 NA intron (NM_022995, intron 1 of 3) intron (NM_022995, intron 1 of 3) 958 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak2_53_261_0.415396876488501_8.2411214397817_3.0673744181697 chr17 33032776 33033661 + 3.0673744181697 NA intron (NM_028543, intron 1 of 3) intron (NM_028543, intron 1 of 3) 163 NM_028543 73451 Mm.129453 NM_028543 ENSMUSG00000067430 Zfp763 1700065O13Rik|AI839635 zinc finger protein 763 protein-coding common_peak1_53_261_0.415396876488501_8.2411214397817_3.0673744181697 chr7 143599484 143600133 + 3.0673744181697 NA intron (NM_013742, intron 1 of 22) intron (NM_013742, intron 1 of 22) 282 NM_001252593 27267 Mm.125659 NM_013742 ENSMUSG00000010755 Cars CA3 cysteinyl-tRNA synthetase protein-coding common_peak2_93_829_-0.267224127621912_9.56335546242333_3.0669133465613 chr7 127253338 127255194 + 3.0669133465613 NA exon (NM_177362, exon 3 of 3) exon (NM_177362, exon 3 of 3) 6401 NM_023203 66422 Mm.29898 NM_023203 ENSMUSG00000042462 Dctpp1 2410015N17Rik|AI854235|RS21-C6 dCTP pyrophosphatase 1 protein-coding common_peak2_101_629_0.275075069926533_9.43674555335055_3.06666029117524 chr9 42123313 42124972 + 3.06666029117524 NA 5' UTR (NM_011436, exon 1 of 48) 5' UTR (NM_011436, exon 1 of 48) 147 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak2_69_597_-0.315943648488215_9.066029849954_3.06649249836057 chr1 60746285 60748368 + 3.06649249836057 NA intron (NM_007642, intron 1 of 3) intron (NM_007642, intron 1 of 3) 938 NM_007642 12487 Mm.255003 NM_007642 ENSMUSG00000026012 Cd28 - CD28 antigen protein-coding common_peak1_210_2083_-0.164540223139545_10.9428694507087_3.0664919732126 chr12 40222009 40223374 + 3.0664919732126 NA promoter-TSS (NR_045157) promoter-TSS (NR_045157) 120 NR_035459 100316693 NR_035459 ENSMUSG00000089371 Mir1938 mir-1938|mmu-mir-1938 microRNA 1938 ncRNA common_peak1_107_680_0.263921201200235_9.54347158861219_3.06553012524557 chr5 115631306 115632700 + 3.06553012524557 NA promoter-TSS (NR_027810) promoter-TSS (NR_027810) 16 NM_198163 77407 Mm.27553 NM_198163 ENSMUSG00000029518 Rab35 9530019H02Rik|AU040256|H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding common_peak2_191_1457_0.183837397324227_10.601693702989_3.06528127715681 chr6 24663556 24665793 + 3.06528127715681 NA 5' UTR (NM_028459, exon 1 of 11) 5' UTR (NM_028459, exon 1 of 11) 321 NM_001167745 73178 Mm.1574 NM_028459 ENSMUSG00000029684 Wasl 2900021I12Rik|3110031I02Rik|N-WASP Wiskott-Aldrich syndrome-like (human) protein-coding common_peak1_70_607_-0.314767967596568_9.0905435296453_3.06510549092687 chr2 165286748 165288025 + 3.06510549092687 NA TTS (NM_207706) TTS (NM_207706) 401 NM_001252574 228875 Mm.21184 NM_144893 ENSMUSG00000017664 Slc35c2 C85957|CGI-15|D2Wsu58e|Ovcov1 solute carrier family 35, member C2 protein-coding common_peak1_254_2108_0.153432984212085_11.1190598718997_3.06392816417991 chr3 59100425 59102590 + 3.06392816417991 NA intron (NM_173398, intron 1 of 1) intron (NM_173398, intron 1 of 1) 314 NM_173398 229323 Mm.123648 NM_173398 ENSMUSG00000050075 Gpr171 A630006E05|F730001G15Rik|H963 G protein-coupled receptor 171 protein-coding unique_peak2_7_70_-1.08010616756587_5.60969403572175_3.06382823807954-2 chr13 22028833 22029302 + 3.06382823807954 NA Intergenic Intergenic 6576 NM_175659 319168 Mm.250564 NM_175659 ENSMUSG00000069302 Hist1h2ah - histone cluster 1, H2ah protein-coding unique_peak2_7_70_-1.08010616756587_5.60969403572175_3.06382823807954 chr10 88826757 88827370 + 3.06382823807954 NA promoter-TSS (NM_175158) promoter-TSS (NM_175158) -249 NM_175158 70683 Mm.29631 NM_175158 ENSMUSG00000004356 Utp20 3830408P06Rik|AA617408|Drim|mDRIM|mDRIN UTP20 small subunit processome component protein-coding unique_peak2_7_70_-1.08010616756587_5.60969403572175_3.06382823807954-3 chr16 38483241 38483838 + 3.06382823807954 NA intron (NM_009855, intron 4 of 4) CpG 24606 NM_009855 12519 Mm.89474 NM_009855 ENSMUSG00000075122 Cd80 B71|Cd28l|Ly-53|Ly53|MIC17|TSA1 CD80 antigen protein-coding unique_peak2_7_70_-1.08010616756587_5.60969403572175_3.06382823807954-4 chr17 44556718 44557287 + 3.06382823807954 NA intron (NR_073425, intron 5 of 5) intron (NR_073425, intron 5 of 5) 179174 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_68_588_-0.319528503583665_9.04235957203863_3.06309930688641 chr4 87983538 87984755 + 3.06309930688641 NA intron (NM_027326, intron 2 of 10) intron (NM_027326, intron 2 of 10) 49261 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding unique_peak2_16_138_-0.715404811749336_6.76123866684884_3.06265717807745 chr9 123872225 123873147 + 3.06265717807745 NA Intergenic RLTR28|LTR|ERVL -10657 NM_011798 23832 Mm.390241 NM_011798 ENSMUSG00000060509 Xcr1 Ccxcr1|Gpr5|mXcr1 chemokine (C motif) receptor 1 protein-coding common_peak1_16_138_-0.715404811749336_6.76123866684884_3.06265717807745 chr17 25785104 25785553 + 3.06265717807745 NA promoter-TSS (NM_026897) promoter-TSS (NM_026897) 10 NM_026897 68977 Mm.29230 NM_026897 ENSMUSG00000061046 Haghl 1500017E18Rik|2810014I23Rik|C330022E15Rik hydroxyacylglutathione hydrolase-like protein-coding common_peak1_16_138_-0.715404811749336_6.76123866684884_3.06265717807745-2 chr4 62591790 62592166 + 3.06265717807745 NA intron (NM_019492, intron 3 of 19) RSINE1|SINE|B4 -27694 NM_001081650 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_16_138_-0.715404811749336_6.76123866684884_3.06265717807745-3 chr5 143269695 143270026 + 3.06265717807745 NA 5' UTR (NM_017467, exon 1 of 7) 5' UTR (NM_017467, exon 1 of 7) 162 NM_017467 54201 Mm.6666 NM_017467 ENSMUSG00000046658 Zfp316 Emzf1|Mzf3|Znf316 zinc finger protein 316 protein-coding common_peak1_163_1185_0.202779592892135_10.3132780909921_3.06237312168394 chr9 44919943 44921673 + 3.06237312168394 NA promoter-TSS (NM_013795) promoter-TSS (NM_013795) -66 NM_013795 27425 Mm.14663 NM_013795 ENSMUSG00000038717 Atp5l 4933437C06Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G protein-coding common_peak1_58_496_-0.351575636520462_8.78131422330206_3.06143684149694 chr17 23771122 23771662 + 3.06143684149694 NA intron (NM_153791, intron 1 of 6) CpG 199 NM_153791 224613 Mm.328835 NM_153791 ENSMUSG00000040097 Flywch1 E030034P13Rik|mKIAA1552 FLYWCH-type zinc finger 1 protein-coding common_peak2_58_496_-0.351575636520462_8.78131422330206_3.06143684149694 chr8 123982249 123983764 + 3.06143684149694 NA 5' UTR (NM_019552, exon 1 of 13) 5' UTR (NM_019552, exon 1 of 13) 116 NM_019552 56199 Mm.274243 NM_019552 ENSMUSG00000031974 Abcb10 Abc-me|Abcb12 ATP-binding cassette, sub-family B (MDR/TAP), member 10 protein-coding unique_peak2_9_84_-0.944869019693282_5.93695642629106_3.06137112031673 chr7 45628333 45628903 + 3.06137112031673 NA exon (NM_028544, exon 3 of 12) exon (NM_028544, exon 3 of 12) 1081 NM_028544 69903 Mm.181396 NM_028544 ENSMUSG00000044562 Rasip1 1110025D03Rik|2610025P08Rik|AI853551|Rain Ras interacting protein 1 protein-coding common_peak2_94_572_0.286078461518306_9.30543055951606_3.06123404628071 chr3 69721960 69723187 + 3.06123404628071 NA intron (NM_133787, intron 2 of 15) CpG-9222 518 NM_133787 97112 Mm.21062 NM_133787 ENSMUSG00000027787 Nmd3 C87860 NMD3 ribosome export adaptor protein-coding common_peak2_40_335_-0.430874157713334_8.17688034392209_3.06109253396935 chr8 46151494 46153090 + 3.06109253396935 NA Intergenic Intergenic -17264 NM_025747 66756 Mm.133623 NM_025747 ENSMUSG00000031631 Cfap97 1110068E21Rik|4933411K20Rik|AW049273|Kiaa1430|mKIAA1430 cilia and flagella associated protein 97 protein-coding common_peak1_74_414_0.33318218205538_8.86355861726198_3.06066377260262 chr14 61598993 61600015 + 3.06066377260262 NA promoter-TSS (NM_023233) promoter-TSS (NM_023233) -8 NM_023233 66597 Mm.491258 NM_023233 ENSMUSG00000035235 Trim13 3110001L12Rik|CAR|LEU5|RNF77|Rfp2 tripartite motif-containing 13 protein-coding common_peak1_73_406_0.337510978131519_8.83764047333201_3.06043764452824 chr4 66827332 66828408 + 3.06043764452824 NA exon (NM_021297, exon 1 of 3) exon (NM_021297, exon 1 of 3) 319 NM_021297 21898 Mm.38049 NM_021297 ENSMUSG00000039005 Tlr4 Lps|Ly87|Ran/M1|Rasl2-8 toll-like receptor 4 protein-coding common_peak1_46_388_-0.400495257560175_8.40337871620611_3.05938066378686 chr2 145934095 145934776 + 3.05938066378686 NA promoter-TSS (NM_175280) promoter-TSS (NM_175280) 265 NM_025820 66877 Mm.248755 NM_025820 ENSMUSG00000001767 Crnkl1 1200013P10Rik|5730590A01Rik|C80326|crn Crn, crooked neck-like 1 (Drosophila) protein-coding common_peak2_110_999_-0.241866117297391_9.84485122601339_3.05931830105818 chr16 36939802 36942776 + 3.05931830105818 NA intron (NM_008225, intron 3 of 13) intron (NM_008225, intron 3 of 13) 6306 NM_008225 15163 Mm.4091 NM_008225 ENSMUSG00000022831 Hcls1 AW213261|HS1 hematopoietic cell specific Lyn substrate 1 protein-coding common_peak1_85_499_0.306555196778218_9.1190618830512_3.05919065315538 chr13 41016181 41017247 + 3.05919065315538 NA intron (NM_025387, intron 1 of 5) intron (NM_025387, intron 1 of 5) 464 NM_025387 66154 Mm.30005 NM_025387 ENSMUSG00000021361 Tmem14c 1110021D01Rik|AU020193|HSPC194 transmembrane protein 14C protein-coding common_peak2_85_499_0.306555196778218_9.1190618830512_3.05919065315538 chr7 119719854 119721435 + 3.05919065315538 NA exon (NM_145585, exon 1 of 4) exon (NM_145585, exon 1 of 4) 154 NM_145585 233802 Mm.26392 NM_145585 ENSMUSG00000030942 Thumpd1 6330575P11Rik THUMP domain containing 1 protein-coding common_peak2_55_275_0.404652604426113_8.31085075899123_3.05843020085969 chr7 75574726 75576147 + 3.05843020085969 NA intron (NM_029332, intron 3 of 36) intron (NM_029332, intron 3 of 36) 119902 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak2_55_275_0.404652604426113_8.31085075899123_3.05843020085969-2 chr8 82402052 82403454 + 3.05843020085969 NA promoter-TSS (NM_008357) promoter-TSS (NM_008357) -167 NM_008357 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding common_peak1_64_551_-0.331609936445272_8.94271948855553_3.05833840505615 chr13 64248334 64249042 + 3.05833840505615 NA promoter-TSS (NM_001122989) promoter-TSS (NM_001122989) -12 NR_045798 66503 Mm.443331 NR_045798 ENSMUSG00000097101 1810034E14Rik - RIKEN cDNA 1810034E14 gene ncRNA common_peak1_47_396_-0.392607417864506_8.43669148821071_3.05827237771855 chr7 141539349 141540316 + 3.05827237771855 NA promoter-TSS (NM_001142681) promoter-TSS (NM_001142681) 25 NM_026522 68038 Mm.245355 NM_026522 ENSMUSG00000025512 Chid1 3110023E09Rik|AI841869 chitinase domain containing 1 protein-coding common_peak1_23_78_0.709994719914992_6.6587781081346_3.05782922698674-2 chr17 47908906 47909551 + 3.05782922698674 NA intron (NM_001110824, intron 1 of 16) intron (NM_001110824, intron 1 of 16) 15404 NM_028767 74123 Mm.240062 NM_028767 ENSMUSG00000023991 Foxp4 1200010K03Rik|2310007G05Rik|mFKHLA forkhead box P4 protein-coding common_peak1_23_78_0.709994719914992_6.6587781081346_3.05782922698674 chr14 60718790 60719376 + 3.05782922698674 NA intron (NM_001033272, intron 4 of 12) B3A|SINE|B2 -13821 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak1_246_2023_0.156375543777413_11.061181346583_3.05740744473069 chr11 49049834 49052154 + 3.05740744473069 NA 5' UTR (NM_173434, exon 2 of 3).2 5' UTR (NM_173434, exon 2 of 3).2 248 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5|OTTMUSG00000005540 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak2_171_1645_-0.185796827794963_10.5918502065241_3.05616199688013 chr12 59130150 59132641 + 3.05616199688013 NA promoter-TSS (NM_001165253) promoter-TSS (NM_001165253) -58 NM_001165253 338320 Mm.213215 NM_146034 ENSMUSG00000021000 Mia2 Ctage5|D12Bwg0579e|Mea6|Mgea|Mgea6 melanoma inhibitory activity 2 protein-coding common_peak1_25_89_0.663568148311257_6.8236371704853_3.05554044391996-2 chr17 17591339 17591879 + 3.05554044391996 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 32880 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_25_89_0.663568148311257_6.8236371704853_3.05554044391996 chr15 64072096 64072701 + 3.05554044391996 NA Intergenic Intergenic -11950 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_25_89_0.663568148311257_6.8236371704853_3.05554044391996 chr4 43040470 43041132 + 3.05554044391996 NA promoter-TSS (NM_001253354) promoter-TSS (NM_001253354) -500 NM_001253354 230088 Mm.260162 NM_172691 ENSMUSG00000036002 Fam214b B230312A22Rik family with sequence similarity 214, member B protein-coding common_peak1_71_391_0.343200140130172_8.78630991418029_3.05518987613168 chr5 139302932 139303733 + 3.05518987613168 NA intron (NM_172723, intron 2 of 10) ZP3AR|Satellite|Satellite 22132 NM_172723 231821 Mm.297819 NM_172723 ENSMUSG00000056413 Adap1 4930431P11Rik|Centa1|GC1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding unique_peak2_8_77_-1.00732916817594_5.78173763477428_3.05468825467783 chr12 106008822 106009533 + 3.05468825467783 NA Intergenic Intergenic -1086 NM_011705 22367 Mm.2981 NM_011705 ENSMUSG00000021115 Vrk1 51PK vaccinia related kinase 1 protein-coding common_peak1_119_1091_-0.230876085949436_9.97731909794513_3.05314927616987 chr5 122234353 122236019 + 3.05314927616987 NA intron (NM_028752, intron 3 of 6) intron (NM_028752, intron 3 of 6) 24899 NM_028752 74096 Mm.28804 NM_028752 ENSMUSG00000064267 Hvcn1 0610039P13Rik|AI450555|BTS|HV1|Vsop.|mVSOP hydrogen voltage-gated channel 1 protein-coding common_peak2_119_1091_-0.230876085949436_9.97731909794513_3.05314927616987 chr12 102756814 102758848 + 3.05314927616987 NA promoter-TSS (NM_025666) promoter-TSS (NM_025666) -21 NM_001142938 100233175 Mm.291222 NM_001142938 ENSMUSG00000091931 AK010878 - cDNA sequence AK010878 protein-coding common_peak1_32_267_-0.488769242796892_7.82170456905933_3.05225901265277 chr8 77460932 77461448 + 3.05225901265277 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -55866 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak2_105_663_0.267314645282543_9.5086967539882_3.05217088751576 chr9 40343929 40346371 + 3.05217088751576 NA intron (NM_172768, intron 2 of 19) intron (NM_172768, intron 2 of 19) 11678 NR_040728 73558 Mm.398307 NR_040728 1700110K17Rik - RIKEN cDNA 1700110K17 gene ncRNA common_peak1_21_68_0.751273285915782_6.48416109973606_3.05180257842841-3 chr2 167946552 167947063 + 3.05180257842841 NA intron (NM_011201, intron 1 of 8) B1_Mus1|SINE|Alu 14480 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_21_68_0.751273285915782_6.48416109973606_3.05180257842841 chr1 40392654 40393146 + 3.05180257842841 NA Intergenic Intergenic -36670 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_21_68_0.751273285915782_6.48416109973606_3.05180257842841-2 chr13 41484960 41485429 + 3.05180257842841 NA intron (NM_001111324, intron 1 of 7) intron (NM_001111324, intron 1 of 7) 2166 NM_001111324 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_69_376_0.349637312441226_8.73323936948928_3.05158735347099 chr18 34650985 34651744 + 3.05158735347099 NA intron (NM_178347, intron 2 of 15) CpG 372 NM_178347 52563 Mm.196638 NM_178347 ENSMUSG00000024370 Cdc23 6030435O18|D18Ertd243e CDC23 cell division cycle 23 protein-coding common_peak2_97_868_-0.25972381871736_9.63335045745572_3.05157377172332 chr4 83524536 83526363 + 3.05157377172332 NA promoter-TSS (NM_001081012) promoter-TSS (NM_001081012) -96 NM_001081012 320226 Mm.180032 NM_029117 ENSMUSG00000052407 Ccdc171 4930418J05Rik|4930473A06Rik|A330015D16Rik coiled-coil domain containing 171 protein-coding common_peak1_97_868_-0.25972381871736_9.63335045745572_3.05157377172332 chr7 44748514 44749414 + 3.05157377172332 NA promoter-TSS (NM_001289839) promoter-TSS (NM_001289839) 335 NM_133945 101568 Mm.28816 NM_133945 ENSMUSG00000002205 Vrk3 AI428238 vaccinia related kinase 3 protein-coding common_peak1_99_613_0.277144969138917_9.40066732993964_3.05141576334501 chr5 100497703 100499096 + 3.05141576334501 NA 5' UTR (NM_001115010, exon 1 of 13) 5' UTR (NM_001115010, exon 1 of 13) 174 NM_001115010 231506 Mm.212568 NM_172714 ENSMUSG00000035310 Lin54 AI461788 lin-54 homolog (C. elegans) protein-coding common_peak2_99_613_0.277144969138917_9.40066732993964_3.05141576334501 chr2 165492547 165493971 + 3.05141576334501 NA promoter-TSS (NM_001007581) promoter-TSS (NM_001007581) 55 NM_001007581 381406 Mm.330785 NM_001007581 ENSMUSG00000039725 Trp53rka 2810408M09Rik transformation related protein 53 regulating kinase A protein-coding common_peak1_219_2186_-0.160221864289465_11.0146265729034_3.05102373292786 chr9 94536700 94539058 + 3.05102373292786 NA 5' UTR (NM_001033145, exon 1 of 3) 5' UTR (NM_001033145, exon 1 of 3) 202 NM_001033145 68861 Mm.258746 NM_001033145 ENSMUSG00000045414 1190002N15Rik GoPro49|HASF RIKEN cDNA 1190002N15 gene protein-coding common_peak2_45_208_0.457713983198983_7.93621612368037_3.05058241212841 chr13 67830675 67831485 + 3.05058241212841 NA promoter-TSS (NR_045194) promoter-TSS (NR_045194) -26 NM_001309374 102637366 Mm.121460 NM_001015506 ENSMUSG00000058246 Gm10037 EG328280|ENSMUSG00000058246|Rslcan24 predicted gene 10037 protein-coding common_peak1_45_208_0.457713983198983_7.93621612368037_3.05058241212841 chr10 53750716 53751344 + 3.05058241212841 NA promoter-TSS (NM_001081428) promoter-TSS (NM_001081428) -121 NM_001081428 75906 Mm.436785 NM_001081428 ENSMUSG00000019856 Fam184a 3110012E06Rik|4930438C08Rik|4930589M24Rik family with sequence similarity 184, member A protein-coding common_peak2_84_492_0.30619801147458_9.0985428421152_3.04999797910614 chr1 134454688 134456094 + 3.04999797910614 NA promoter-TSS (NM_001311136) promoter-TSS (NM_001311136) -140 NM_153128 240756 Mm.87398 NM_153128 ENSMUSG00000026455 Klhl12 C3ip1 kelch-like 12 protein-coding common_peak2_28_105_0.620742859949369_7.03829188453788_3.04839995408418 chr10 7824792 7825911 + 3.04839995408418 NA Intergenic Intergenic -7119 NM_172785 237256 Mm.140055 NM_172785 ENSMUSG00000039981 Zc3h12d D730019B10Rik|TFL zinc finger CCCH type containing 12D protein-coding common_peak1_28_105_0.620742859949369_7.03829188453788_3.04839995408418-3 chr5 51552575 51553233 + 3.04839995408418 NA intron (NR_132764, intron 1 of 12) intron (NR_132764, intron 1 of 12) 1017 NR_027710 19017 Mm.259072 NM_008904 ENSMUSG00000029167 Ppargc1a A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PPARGC-1-alpha|Pgc-1alpha|Pgc1|Pgco1|Ppargc1 peroxisome proliferative activated receptor, gamma, coactivator 1 alpha protein-coding common_peak1_28_105_0.620742859949369_7.03829188453788_3.04839995408418 chr10 127145976 127146679 + 3.04839995408418 NA Intergenic L1_Mus4|LINE|L1 -18829 NR_045166 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak1_28_105_0.620742859949369_7.03829188453788_3.04839995408418-2 chr16 90934205 90934790 + 3.04839995408418 NA intron (NM_026502, intron 1 of 6) CpG 352 NM_026502 68001 Mm.45374 NM_026502 ENSMUSG00000022972 1110004E09Rik - RIKEN cDNA 1110004E09 gene protein-coding common_peak2_18_153_-0.666422337298011_6.9335753720459_3.0481738825683 chr13 94978868 94979900 + 3.0481738825683 NA intron (NM_172590, intron 2 of 12) intron (NM_172590, intron 2 of 12) 3040 NM_172590 218460 Mm.33856 NM_172590 ENSMUSG00000042015 Wdr41 B830029I03Rik|MSTP048 WD repeat domain 41 protein-coding common_peak1_18_153_-0.666422337298011_6.9335753720459_3.0481738825683 chr12 75734690 75735090 + 3.0481738825683 NA intron (NM_030750, intron 1 of 2) intron (NM_030750, intron 1 of 2) 839 NM_030750 81535 Mm.280199 NM_030750 ENSMUSG00000021054 Sgpp1 AI463453|SPP|SPP1|Spph1 sphingosine-1-phosphate phosphatase 1 protein-coding common_peak1_18_153_-0.666422337298011_6.9335753720459_3.0481738825683-2 chr18 36673343 36673740 + 3.0481738825683 NA intron (NM_146085, intron 11 of 11) intron (NM_146085, intron 11 of 11) -3230 NR_028355 24068 Mm.29058 NM_025291 ENSMUSG00000006050 Sra1 AA959952|Sra|Srap|Straa1|Strra1 steroid receptor RNA activator 1 protein-coding unique_peak2_18_153_-0.666422337298011_6.9335753720459_3.0481738825683 chr4 41124593 41125431 + 3.0481738825683 NA promoter-TSS (NM_139236) promoter-TSS (NM_139236) -673 NM_139236 230082 Mm.285797 NM_139236 ENSMUSG00000028430 Nol6 AA410091|Nrap nucleolar protein family 6 (RNA-associated) protein-coding unique_peak2_18_153_-0.666422337298011_6.9335753720459_3.0481738825683-2 chrX 101419388 101420274 + 3.0481738825683 NA promoter-TSS (NM_001177985) promoter-TSS (NM_001177985) 83 NM_001177986 56364 Mm.23458 NM_019831 ENSMUSG00000031310 Zmym3 9030216B10Rik|AW122925|DXS6673El|Zfp261 zinc finger, MYM-type 3 protein-coding common_peak2_35_145_0.541473114179006_7.46056111596952_3.04774813661899 chr11 116004526 116005628 + 3.04774813661899 NA intron (NM_001005608, intron 32 of 39) CpG 7642 NM_016905 14635 Mm.2820 NM_016905 ENSMUSG00000020766 Galk1 AA409894|GALK|Gk|Glk|Glk1 galactokinase 1 protein-coding common_peak1_35_145_0.541473114179006_7.46056111596952_3.04774813661899 chr9 78113152 78113815 + 3.04774813661899 NA intron (NM_019987, intron 1 of 13) CpG 245 NM_019987 56542 Mm.288719 NM_019987 ENSMUSG00000009828 Ick 2210420N10Rik|AI848300|Mrk intestinal cell kinase protein-coding common_peak2_35_145_0.541473114179006_7.46056111596952_3.04774813661899-2 chr8 25130063 25131160 + 3.04774813661899 NA Intergenic MMERGLN-int|LTR|ERV1 28622 NR_106187 102467006 NR_106187 ENSMUSG00000099142 Mir8108 Gm27484|mmu-mir-8108 microRNA 8108 ncRNA common_peak1_29_242_-0.516156071008078_7.66673446810174_3.04737040514363 chr3 129553117 129553780 + 3.04737040514363 NA intron (NM_130450, intron 2 of 4) B4|SINE|B4 21062 NM_130450 170439 Mm.314113 NM_130450 ENSMUSG00000041220 Elovl6 C77826|FAE|LCE ELOVL family member 6, elongation of long chain fatty acids (yeast) protein-coding common_peak2_329_2939_0.13043740600183_11.5868191427246_3.04729406081916 chr1 131197814 131201390 + 3.04729406081916 NA intron (NM_018750, intron 2 of 5) intron (NM_018750, intron 2 of 5) 583 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak1_13_32_1.01555831947312_5.55217327909501_3.04692638843302 chr9 96396276 96396602 + 3.04692638843302 NA Intergenic ID4|SINE|ID -32140 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding unique_peak1_13_32_1.01555831947312_5.55217327909501_3.04692638843302 chr1 168432490 168432846 + 3.04692638843302 NA promoter-TSS (NM_001291509) promoter-TSS (NM_001291509) -499 NM_008783 18514 Mm.43358 NM_008783 ENSMUSG00000052534 Pbx1 2310056B04Rik|D230003C07Rik|Pbx-1 pre B cell leukemia homeobox 1 protein-coding unique_peak1_13_32_1.01555831947312_5.55217327909501_3.04692638843302-2 chr13 65101044 65101455 + 3.04692638843302 NA intron (NM_001083901, intron 2 of 12) intron (NM_001083901, intron 2 of 12) 11733 NM_001083901 66631 Mm.239196 NM_133680 ENSMUSG00000038212 Mfsd14b 5730414C17Rik|AU045608|AW539692|Hiatl1 major facilitator superfamily domain containing 14B protein-coding common_peak1_79_692_-0.292352692133726_9.29053519607035_3.04603544215363 chr9 33059581 33060724 + 3.04603544215363 NA Intergenic Intergenic -131186 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak2_189_1438_0.18423122472127_10.5829664891009_3.04526982757661 chr9 20975163 20977583 + 3.04526982757661 NA intron (NM_010333, intron 1 of 1) CpG 420 NM_010333 14739 Mm.46493 NM_010333 ENSMUSG00000043895 S1pr2 1100001A16Rik|Edg5|Gpcr13|H218|LPb2|S1P2 sphingosine-1-phosphate receptor 2 protein-coding common_peak1_264_2216_0.149454297454128_11.1891202035944_3.04501021434 chr12 99391800 99393955 + 3.04501021434 NA intron (NM_183186, intron 1 of 5) CpG 57197 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak2_284_2956_-0.137314221691829_11.4612614172744_3.04434031458575 chr6 30046893 30049303 + 3.04434031458575 NA 5' UTR (NM_001164227, exon 1 of 12) 5' UTR (NM_001164227, exon 1 of 12) 110 NM_001164226 18181 Mm.259258 NM_010938 ENSMUSG00000058440 Nrf1 C87038|D6Ertd415e nuclear respiratory factor 1 protein-coding common_peak1_183_1379_0.187845185987047_10.5243751446591_3.04392857991662 chr2 52423249 52425777 + 3.04392857991662 NA intron (NM_182994, intron 1 of 5) L1M4b|LINE|L1 361 NM_182994 75423 Mm.314378 NM_182994 ENSMUSG00000036093 Arl5a 2410015N24Rik|2810410P22Rik|AA408731|AW610751|Arl5|T25534 ADP-ribosylation factor-like 5A protein-coding common_peak2_62_325_0.372881005720705_8.53516865709143_3.04389382451541 chr10 116564272 116566021 + 3.04389382451541 NA intron (NR_024327, intron 1 of 13) intron (NR_024327, intron 1 of 13) 16365 NM_001037848 72068 Mm.351553 NM_028082 ENSMUSG00000020166 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650 CCR4-NOT transcription complex, subunit 2 protein-coding common_peak1_58_297_0.386357884579663_8.41234746275199_3.04322084445479 chr1 36999689 37000467 + 3.04322084445479 NA Intergenic Intergenic -60551 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding common_peak1_67_362_0.352935145351132_8.68029331067132_3.04313283794747 chr5 120587797 120588639 + 3.04313283794747 NA promoter-TSS (NM_029408) promoter-TSS (NM_029408) 395 NM_145853 252972 Mm.114054 NM_145853 ENSMUSG00000032741 Tpcn1 5730403B01Rik|Tpc1|mKIAA1169 two pore channel 1 protein-coding common_peak1_49_414_-0.384340022911546_8.50479751477851_3.04284086605712 chr7 19572959 19573911 + 3.04284086605712 NA promoter-TSS (NM_027189) promoter-TSS (NM_027189) -92 NM_027189 69731 Mm.24540 NM_027189 ENSMUSG00000044709 Gemin7 2400008I04Rik|AI120175|AI461688 gem (nuclear organelle) associated protein 7 protein-coding common_peak2_61_318_0.375881902155793_8.50535356484277_3.04284086605703 chr11 107547276 107548710 + 3.04284086605703 NA promoter-TSS (NM_198298) promoter-TSS (NM_198298) 33 NM_198298 78455 Mm.272047 NM_198298 ENSMUSG00000020721 Helz 3110078M01Rik|9430093I07Rik|9630002H22Rik|AI851979|DRHC helicase with zinc finger domain protein-coding common_peak2_61_318_0.375881902155793_8.50535356484277_3.04284086605703-2 chr13 91093051 91094886 + 3.04284086605703 NA intron (NM_025770, intron 3 of 7) intron (NM_025770, intron 3 of 7) 130019 NM_025770 66795 Mm.235385 NM_025770 ENSMUSG00000021619 Atg10 5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l autophagy related 10 protein-coding common_peak2_199_1957_-0.169312923908242_10.8505085876496_3.04223885702406 chr5 33377536 33379793 + 3.04223885702406 NA promoter-TSS (NM_001081101) promoter-TSS (NM_001081101) -32 NM_001081101 71101 Mm.132178 NM_001081101 ENSMUSG00000037355 Uvssa 4933407H18Rik|D330017J19Rik|Kiaa1530|mKIAA1530 UV stimulated scaffold protein A protein-coding common_peak1_199_1957_-0.169312923908242_10.8505085876496_3.04223885702406 chr10 80398398 80400387 + 3.04223885702406 NA 5' UTR (NM_013595, exon 1 of 7) 5' UTR (NM_013595, exon 1 of 7) 139 NM_013595 17192 Mm.7142 NM_013595 ENSMUSG00000035478 Mbd3 AI181826|AU019209 methyl-CpG binding domain protein 3 protein-coding common_peak1_24_201_-0.572196290615411_7.37211333744409_3.04056102065235 chr2 112262223 112262814 + 3.04056102065235 NA 3' UTR (NM_025403, exon 2 of 2) 3' UTR (NM_025403, exon 2 of 2) 592 NM_025403 66181 Mm.272346 NM_025403 ENSMUSG00000027133 Nop10 1110036B12Rik|NOP10P|Nola3 NOP10 ribonucleoprotein protein-coding unique_peak2_24_201_-0.572196290615411_7.37211333744409_3.04056102065235-2 chr9 37236270 37237727 + 3.04056102065235 NA intron (NM_001145960, intron 9 of 18) intron (NM_001145960, intron 9 of 18) 18740 NM_020258 56857 Mm.440037 NM_020258 ENSMUSG00000032122 Slc37a2 G3PP|Slc37a1|cI-2|ci2 solute carrier family 37 (glycerol-3-phosphate transporter), member 2 protein-coding unique_peak2_24_201_-0.572196290615411_7.37211333744409_3.04056102065235 chr6 31084828 31086410 + 3.04056102065235 NA Intergenic Intergenic -22526 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_64_340_0.363286591308723_8.59527122467853_3.04047327163579 chr15 38280029 38281183 + 3.04047327163579 NA Intergenic Intergenic 20105 NM_013692 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding common_peak1_42_352_-0.41779720301723_8.25462577176257_3.0402428693278 chr14 63177967 63178753 + 3.0402428693278 NA 5' UTR (NM_010191, exon 3 of 10) 5' UTR (NM_010191, exon 3 of 10) 1218 NM_010191 14137 Mm.474432 NM_010191 ENSMUSG00000021273 Fdft1 SQS|SS farnesyl diphosphate farnesyl transferase 1 protein-coding common_peak2_154_1101_0.208879283041469_10.2103481500919_3.03987599956288 chr7 13033288 13035547 + 3.03987599956288 NA TTS (NM_145578) TTS (NM_145578) 360 NM_026885 68953 Mm.295670 NM_026885 ENSMUSG00000033916 Chmp2a 1500016L11Rik charged multivesicular body protein 2A protein-coding unique_peak2_10_92_-0.905973379600435_6.08617212130781_3.0393248101473 chr10 58464141 58464796 + 3.0393248101473 NA exon (NM_011240, exon 12 of 29) exon (NM_011240, exon 12 of 29) 17616 NM_011240 19386 Mm.431695 NM_011240 ENSMUSG00000003226 Ranbp2 A430087B05Rik|AI256741|NUP358 RAN binding protein 2 protein-coding unique_peak2_10_92_-0.905973379600435_6.08617212130781_3.0393248101473-2 chr2 118557917 118558546 + 3.0393248101473 NA Intergenic IAPLTR2_Mm|LTR|ERVK -8553 NM_138313 171543 Mm.210125 NM_138313 ENSMUSG00000040093 Bmf AW260063|AW411872 BCL2 modifying factor protein-coding common_peak1_134_1246_-0.213932596111755_10.1772794517738_3.03922873872131 chr7 81862416 81864241 + 3.03922873872131 NA intron (NR_111910, intron 2 of 7) intron (NR_111910, intron 2 of 7) 641 NM_001291282 107769 Mm.221412 NM_145375 ENSMUSG00000038623 Tm6sf1 AI428514|BC023123|C630016D09Rik transmembrane 6 superfamily member 1 protein-coding common_peak1_81_468_0.314611463736407_9.03074984438358_3.03892755602077 chr9 59539125 59540357 + 3.03892755602077 NA promoter-TSS (NM_010421) promoter-TSS (NM_010421) 74 NM_010421 15211 Mm.2284 NM_010421 ENSMUSG00000025232 Hexa Hex-1 hexosaminidase A protein-coding common_peak2_175_1688_-0.182318936548366_10.6307941445272_3.0376922835793 chr14 54073515 54076894 + 3.0376922835793 NA Intergenic Intergenic 178725 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_40_176_0.493837714982428_7.71452440757421_3.03734984360222 chr17 10840302 10840922 + 3.03734984360222 NA promoter-TSS (NM_027032) promoter-TSS (NM_027032) 228 NM_016694 50873 Mm.311110 NM_016694 ENSMUSG00000023826 Park2 PRKN Parkinson disease (autosomal recessive, juvenile) 2, parkin protein-coding common_peak2_46_215_0.448243585262549_7.97900929479474_3.03730156976008 chr16 64789168 64790661 + 3.03730156976008 NA Intergenic Intergenic -3593 NM_028059 72020 Mm.25960 NM_028059 ENSMUSG00000047141 Zfp654 1600021C16Rik|1810008K20Rik|433036|Gm5488|Znf654 zinc finger protein 654 protein-coding common_peak2_46_215_0.448243585262549_7.97900929479474_3.03730156976008-2 chr6 149408532 149409903 + 3.03730156976008 NA 5' UTR (NM_009753, exon 1 of 9) 5' UTR (NM_009753, exon 1 of 9) 233 NM_009753 12121 Mm.177181 NM_009753 ENSMUSG00000003452 Bicd1 B830009D06Rik|bic-D 1 bicaudal D homolog 1 (Drosophila) protein-coding common_peak2_50_423_-0.380249677435742_8.53779561584533_3.0365283128765 chr11 40733548 40734492 + 3.0365283128765 NA promoter-TSS (NM_013552) promoter-TSS (NM_013552) 359 NM_001290697 52653 Mm.276504 NM_026023 ENSMUSG00000020328 Nudcd2 - NudC domain containing 2 protein-coding common_peak2_170_1253_0.196311602901419_10.3904774342527_3.03615288984764 chr3 103800970 103803440 + 3.03615288984764 NA promoter-TSS (NR_040412) promoter-TSS (NR_040412) -924 NR_040412 100503157 Mm.445554 NR_040412 ENSMUSG00000084997 Gm15471 OTTMUSG00000022448 predicted gene 15471 ncRNA common_peak1_47_221_0.445971912928345_8.01740182281428_3.03612370781061-2 chr13 106936181 106937064 + 3.03612370781061 NA intron (NM_029665, intron 1 of 29) CpG 293 NM_029665 76582 Mm.132208 NM_029665 ENSMUSG00000042590 Ipo11 1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11 importin 11 protein-coding common_peak1_47_221_0.445971912928345_8.01740182281428_3.03612370781061-3 chr5 24628935 24629963 + 3.03612370781061 NA Intergenic Intergenic -16004 NR_003953 72252 Mm.87446 NR_003953 ENSMUSG00000038165 1700022A21Rik - glycerol-3-phosphate dehydrogenase 1-like pseudogene pseudo common_peak1_47_221_0.445971912928345_8.01740182281428_3.03612370781061 chr13 100201741 100202437 + 3.03612370781061 NA promoter-TSS (NM_001126182) promoter-TSS (NM_001126182) 33 NM_001126182 17948 Mm.89961 NM_010872 ENSMUSG00000078945 Naip2 Birc1b|Naip-rs6 NLR family, apoptosis inhibitory protein 2 protein-coding common_peak1_37_309_-0.449147890690992_8.05155045992874_3.0358201213461 chr11 88203644 88204229 + 3.0358201213461 NA promoter-TSS (NM_024174) promoter-TSS (NM_024174) -452 NM_024174 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding unique_peak2_37_309_-0.449147890690992_8.05155045992874_3.0358201213461 chr2 68353453 68355170 + 3.0358201213461 NA intron (NM_016866, intron 10 of 17) intron (NM_016866, intron 10 of 17) 117670 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding common_peak1_37_309_-0.449147890690992_8.05155045992874_3.0358201213461-2 chr4 149737524 149738039 + 3.0358201213461 NA promoter-TSS (NM_001284273) promoter-TSS (NM_001284273) -11 NM_001284273 230917 Mm.266704 NM_177672 ENSMUSG00000044700 Tmem201 AV028368|D4Ertd429e|Net5|Samp1 transmembrane protein 201 protein-coding unique_peak2_33_275_-0.478375884617641_7.86933651446935_3.03509685084776 chr5 120510748 120512099 + 3.03509685084776 NA intron (NM_133221, intron 1 of 15) CpG 231 NM_133221 170756 Mm.291070 NM_133221 ENSMUSG00000032754 Slc8b1 AF261233|NCKX6|NCLX|Slc24a6 solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 protein-coding common_peak1_33_275_-0.478375884617641_7.86933651446935_3.03509685084776 chr3 105763037 105763670 + 3.03509685084776 NA intron (NM_145541, intron 1 of 7) intron (NM_145541, intron 1 of 7) 38028 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein-1a protein-coding common_peak2_33_275_-0.478375884617641_7.86933651446935_3.03509685084776 chr10 39959513 39960497 + 3.03509685084776 NA 5' UTR (NM_001173500, exon 1 of 4) 5' UTR (NM_001173500, exon 1 of 4) 148 NM_001173500 100041085 Mm.332530 NM_001173500 ENSMUSG00000071335 Mfsd4b3 G630090E17Rik|Naglt1c major facilitator superfamily domain containing 4B3 protein-coding common_peak2_118_775_0.247159528052517_9.72349260621339_3.03360342196589 chr11 54807058 54808672 + 3.03360342196589 NA Intergenic Intergenic -12054 NR_040284 432562 Mm.406948 NR_040284 ENSMUSG00000086789 Lyrm7os Gm12228|OTTMUSG00000005674 LYR motif containing 7, opposite strand ncRNA common_peak2_131_890_0.231262948511668_9.91491309577776_3.03358618028027 chr2 164745514 164747111 + 3.03358618028027 NA intron (NM_133763, intron 1 of 12) MIRb|SINE|MIR 297 NM_133763 76233 Mm.440009 NM_133763 ENSMUSG00000017299 Dnttip1 6430706C13Rik deoxynucleotidyltransferase, terminal, interacting protein 1 protein-coding common_peak2_52_440_-0.368893080114409_8.60018830550032_3.03342004142596 chr19 57078747 57080509 + 3.03342004142596 NA intron (NM_001103178, intron 3 of 19) intron (NM_001103178, intron 3 of 19) 39396 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_125_1152_-0.222955326513633_10.059699134395_3.0328629103387 chr13 52806998 52808687 + 3.0328629103387 NA Intergenic Intergenic -50637 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak2_111_1008_-0.23892108671572_9.8592499157485_3.03260770493127 chr11 22981216 22982970 + 3.03260770493127 NA exon (NM_144514, exon 1 of 3) exon (NM_144514, exon 1 of 3) 191 NM_144514 17846 Mm.259903 NM_144514 ENSMUSG00000051355 Commd1 AI256843|Murr1|U2/Mu COMM domain containing 1 protein-coding common_peak1_209_2071_-0.164615745823379_10.9345004147749_3.03256381992919 chr10 128096733 128098458 + 3.03256381992919 NA intron (NM_054078, intron 2 of 29) intron (NM_054078, intron 2 of 29) 4812 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak1_199_1538_0.178074609367243_10.6768148210118_3.03178498008665 chr11 116198221 116199637 + 3.03178498008665 NA promoter-TSS (NM_027107) promoter-TSS (NM_027107) 74 NM_027107 69535 Mm.390347 NM_027107 ENSMUSG00000020778 Ten1 2310004N24Rik TEN1 telomerase capping complex subunit protein-coding unique_peak2_15_130_-0.737169738412282_6.66483813233131_3.03090130405942 chr3 125159590 125160724 + 3.03090130405942 NA Intergenic Intergenic -243934 NM_022565 64580 Mm.444289 NM_022565 ENSMUSG00000027971 Ndst4 4930439H17Rik N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4 protein-coding common_peak2_163_1186_0.201563667796233_10.31388605354_3.03067933770089 chr11 49711735 49713712 + 3.03067933770089 NA promoter-TSS (NM_212484) promoter-TSS (NM_212484) -1 NM_212484 104625 Mm.247113 NM_212484 ENSMUSG00000020362 Cnot6 CCR4 CCR4-NOT transcription complex, subunit 6 protein-coding unique_peak2_22_185_-0.600698007014521_7.23880980760077_3.02974643963686 chr5 134932181 134933070 + 3.02974643963686 NA 5' UTR (NM_024479, exon 2 of 6) 5' UTR (NM_024479, exon 2 of 6) 252 NM_024479 79565 Mm.34235 NM_024479 ENSMUSG00000040557 Wbscr27 AW492986|BC002286 Williams Beuren syndrome chromosome region 27 (human) protein-coding unique_peak2_22_185_-0.600698007014521_7.23880980760077_3.02974643963686-2 chr5 149598523 149599954 + 3.02974643963686 NA exon (NM_029440, exon 21 of 23) exon (NM_029440, exon 21 of 23) 37077 NM_013559 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding common_peak1_22_185_-0.600698007014521_7.23880980760077_3.02974643963686 chr5 37044188 37044699 + 3.02974643963686 NA Intergenic Intergenic -6414 NM_178394 76071 Mm.85280 NM_178394 ENSMUSG00000063646 Jakmip1 5830437M04Rik|C330021K24Rik|Gababrbp|Marlin-1 janus kinase and microtubule interacting protein 1 protein-coding common_peak1_96_589_0.280767219114205_9.34495475380631_3.02955849383288 chr13 69611670 69612608 + 3.02955849383288 NA promoter-TSS (NM_175283) promoter-TSS (NM_175283) 123 NM_145354 28114 Mm.260009 NM_145354 ENSMUSG00000021595 Nsun2 D13Wsu123e|Misu NOL1/NOP2/Sun domain family member 2 protein-coding unique_peak2_27_225_-0.533614212397262_7.55337185621656_3.02954652958243 chr11 58948320 58949486 + 3.02954652958243 NA promoter-TSS (NM_030082) promoter-TSS (NM_030082) -8 NM_030082 78303 Mm.28022 NM_030082 ENSMUSG00000056895 Hist3h2ba 1500011O09Rik|AI413321 histone cluster 3, H2ba protein-coding common_peak1_27_225_-0.533614212397262_7.55337185621656_3.02954652958243 chrX 42424535 42425030 + 3.02954652958243 NA Intergenic Intergenic -77783 NM_011364 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak2_93_828_-0.265484892883375_9.56248584505406_3.02900565291156 chr6 124808380 124810212 + 3.02900565291156 NA 5' UTR (NM_001306051, exon 2 of 3) 5' UTR (NM_001306051, exon 2 of 3) 378 NM_001306053 14794 Mm.261906 NM_013539 ENSMUSG00000038451 Spsb2 AI461677|C9|Grcc9|SSB2 splA/ryanodine receptor domain and SOCS box containing 2 protein-coding common_peak1_232_2336_-0.154330457908976_11.1132767898283_3.02870005048711 chr14 73384197 73385876 + 3.02870005048711 NA exon (NM_008410, exon 1 of 6) exon (NM_008410, exon 1 of 6) 235 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak2_267_2249_0.148059036418037_11.2097388043134_3.02852661573883 chr10 41885839 41890165 + 3.02852661573883 NA intron (NM_001013370, intron 1 of 9) intron (NM_001013370, intron 1 of 9) 563 NM_001013370 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding common_peak1_26_94_0.652351958508647_6.89603158758527_3.02776668942203-3 chr7 46033766 46034285 + 3.02776668942203 NA intron (NM_153057, intron 1 of 30) CpG 329 NM_153057 211548 Mm.274811 NM_153057 ENSMUSG00000030835 Nomo1 D7Ertd156e|Nomo|pM5 nodal modulator 1 protein-coding common_peak1_26_94_0.652351958508647_6.89603158758527_3.02776668942203 chr11 70539417 70539938 + 3.02776668942203 NA promoter-TSS (NM_008876) promoter-TSS (NM_008876) -595 NM_008876 18806 Mm.260177 NM_008876 ENSMUSG00000020828 Pld2 PLD1C phospholipase D2 protein-coding common_peak1_26_94_0.652351958508647_6.89603158758527_3.02776668942203-2 chr2 178525091 178525781 + 3.02776668942203 NA Intergenic ORR1D1|LTR|ERVL-MaLR 94921 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding unique_peak2_26_94_0.652351958508647_6.89603158758527_3.02776668942203 chr11 8688973 8689777 + 3.02776668942203 NA Intergenic Intergenic -24840 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak2_102_639_0.269619788889377_9.45673798933205_3.02734169256234 chr11 6527097 6529356 + 3.02734169256234 NA intron (NR_045893, intron 2 of 3) intron (NR_045893, intron 2 of 3) 534 NR_045893 100041286 Mm.459507 NR_045893 ENSMUSG00000085156 Snhg15 Gm11974|OTTMUSG00000005115 small nucleolar RNA host gene 15 ncRNA common_peak1_99_887_-0.25517605184101_9.6668278404296_3.02705730380234 chr11 16986816 16988114 + 3.02705730380234 NA exon (NM_019549, exon 6 of 10) exon (NM_019549, exon 6 of 10) 21253 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding common_peak1_124_1141_-0.22322615634814_10.0457338571888_3.026413800924 chr19 46961383 46962550 + 3.026413800924 NA intron (NM_001164363, intron 1 of 17) CpG 385 NM_029810 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak1_78_445_0.321199191193012_8.96149949551681_3.02517727496549 chr5 127616324 127617637 + 3.02517727496549 NA exon (NM_133895, exon 1 of 8) exon (NM_133895, exon 1 of 8) 412 NM_133895 100561 Mm.28506 NM_133895 ENSMUSG00000029416 Slc15a4 AA987064|AW742963|C130069N12Rik|PHT1|PTR4 solute carrier family 15, member 4 protein-coding common_peak2_78_445_0.321199191193012_8.96149949551681_3.02517727496549-2 chr4 148447656 148449342 + 3.02517727496549 NA promoter-TSS (NM_020009) promoter-TSS (NM_020009) -83 NM_020009 56717 Mm.21158 NM_020009 ENSMUSG00000028991 Mtor 2610315D21Rik|AI327068|FRAP|FRAP2|Frap1|RAFT1|RAPT1|flat mechanistic target of rapamycin (serine/threonine kinase) protein-coding common_peak2_78_445_0.321199191193012_8.96149949551681_3.02517727496549 chr3 52572021 52574154 + 3.02517727496549 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -166637 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak1_250_2067_0.153777010499065_11.0909089755645_3.02442928598517 chrX 51016854 51019924 + 3.02442928598517 NA promoter-TSS (NM_172413) promoter-TSS (NM_172413) -371 NM_172413 72065 Mm.43152 NM_172413 ENSMUSG00000050029 Rap2c 2010200P20Rik|AI194294|AL022976 RAP2C, member of RAS oncogene family protein-coding unique_peak2_30_250_-0.504861349216466_7.71911287934254_3.02440582254781 chr14 11161008 11162581 + 3.02440582254781 NA intron (NM_001308285, intron 1 of 9) CpG 241 NM_010210 14198 Mm.397619 NM_010210 ENSMUSG00000060579 Fhit AW045638|Fra14A2 fragile histidine triad gene protein-coding common_peak1_30_250_-0.504861349216466_7.71911287934254_3.02440582254781 chr11 64978932 64979592 + 3.02440582254781 NA exon (NM_023479, exon 1 of 25) exon (NM_023479, exon 1 of 25) 227 NM_023479 68626 Mm.157711 NM_023479 ENSMUSG00000020549 Elac2 1110017O07Rik|D11Wsu80e|Hpc2 elaC ribonuclease Z 2 protein-coding common_peak2_147_1383_-0.201619954052601_10.3338182506104_3.02386943597451 chr4 44011805 44013932 + 3.02386943597451 NA exon (NM_001290470, exon 1 of 6) exon (NM_001290470, exon 1 of 6) 218 NM_001290470 12757 Mm.298875 NM_016760 ENSMUSG00000028478 Clta AV026556|Lca clathrin, light polypeptide (Lca) protein-coding common_peak2_387_4245_-0.113325670169258_11.9952258208207_3.02337593652248 chr13 23737555 23741155 + 3.02337593652248 NA exon (NM_015786, exon 1 of 1) exon (NM_015786, exon 1 of 1) 548 NM_015786 50708 Mm.193539 NM_015786 ENSMUSG00000036181 Hist1h1c 0610008C09Rik|H1.2|H1c|H1f2|H1var1|His1a histone cluster 1, H1c protein-coding common_peak2_278_2369_0.144279893255252_11.2828112904132_3.02304090066859 chr19 4395681 4398792 + 3.02304090066859 NA promoter-TSS (NM_001001984) promoter-TSS (NM_001001984) -159 NM_001001984 225876 Mm.31941 NM_001001984 ENSMUSG00000054611 Kdm2a 100043628|5530401A10Rik|AA589516|AW536790|Cxxc8|Fbl11|Fbl7|Fbxl11|Gm4560|Jhdm1|Jhdm1a|lalina lysine (K)-specific demethylase 2A protein-coding common_peak1_12_28_1.070827938327_5.39339496429107_3.02253383160001 chr1 38664252 38664566 + 3.02253383160001 NA Intergenic Intergenic -37165 NM_001290814 16764 Mm.336679 NM_010678 ENSMUSG00000037138 Aff3 3222402O04Rik|A730046J16|LAF-4|Laf4 AF4/FMR2 family, member 3 protein-coding common_peak1_12_28_1.070827938327_5.39339496429107_3.02253383160001-2 chr3 60407663 60407959 + 3.02253383160001 NA Intergenic Intergenic -65019 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_69_596_-0.313529095554916_9.06482257348735_3.02186612409176 chr17 17609222 17610590 + 3.02186612409176 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 14583 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_440_4260_0.108168933039032_12.1110608026977_3.02156785468256 chr7 75608370 75612544 + 3.02156785468256 NA exon (NM_029332, exon 7 of 37) exon (NM_029332, exon 7 of 37) 154923 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_420_4675_-0.108045970679635_12.1370362291918_3.02132455443295 chr13 17803168 17806210 + 3.02132455443295 NA 5' UTR (NM_001081058, exon 1 of 14) 5' UTR (NM_001081058, exon 1 of 14) 408 NM_001081058 69562 Mm.193924 NM_027118 ENSMUSG00000041297 Cdk13 2310015O17Rik|Cdc2l5 cyclin-dependent kinase 13 protein-coding common_peak1_70_606_-0.312393160408664_9.08935612605135_3.02085710607291 chr13 3636528 3637315 + 3.02085710607291 NA intron (NM_001267724, intron 1 of 3) intron (NM_001267724, intron 1 of 3) 2889 NM_001267724 142688 Mm.253061 NM_178283 ENSMUSG00000033781 Asb13 2210015B19Rik|6430573K02Rik|Asb-13|C85285 ankyrin repeat and SOCS box-containing 13 protein-coding common_peak1_70_606_-0.312393160408664_9.08935612605135_3.02085710607291-2 chr6 129228300 129229335 + 3.02085710607291 NA Intergenic B1_Mus2|SINE|Alu 9228 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak1_32_128_0.566092692237626_7.29427360154207_3.0206199764763 chr11 5149126 5149707 + 3.0206199764763 NA intron (NM_080595, intron 1 of 14) intron (NM_080595, intron 1 of 14) 2806 NM_080595 140703 Mm.840 NM_080595 ENSMUSG00000034164 Emid1 AW122071|CO-5|Emu1 EMI domain containing 1 protein-coding common_peak1_32_128_0.566092692237626_7.29427360154207_3.0206199764763-2 chr11 68546244 68547109 + 3.0206199764763 NA intron (NR_126153, intron 18 of 19) intron (NR_126153, intron 18 of 19) -9510 NM_146004 215723 Mm.131205 NM_146004 ENSMUSG00000048329 Mfsd6l - major facilitator superfamily domain containing 6-like protein-coding common_peak1_32_128_0.566092692237626_7.29427360154207_3.0206199764763-3 chr3 34080783 34081408 + 3.0206199764763 NA intron (NM_001286972, intron 1 of 4) intron (NM_001286972, intron 1 of 4) 259 NM_001286972 67713 Mm.274266 NM_026332 ENSMUSG00000027679 Dnajc19 1810055D05Rik|AA959924|Tim14 DnaJ heat shock protein family (Hsp40) member C19 protein-coding common_peak1_32_128_0.566092692237626_7.29427360154207_3.0206199764763-4 chr4 89137222 89137866 + 3.0206199764763 NA intron (NM_024433, intron 1 of 7) CpG 174 NM_024433 66902 Mm.28500 NM_024433 ENSMUSG00000062937 Mtap 1300019I21Rik|MSAP methylthioadenosine phosphorylase protein-coding common_peak1_109_987_-0.240463902012406_9.82813528057848_3.02009275702903 chr17 32787529 32788456 + 3.02009275702903 NA intron (NM_172458, intron 1 of 3) CpG 295 NM_172458 208292 Mm.38813 NM_172458 ENSMUSG00000024298 Zfp871 4732483N19|9030612M13Rik|AI118577|AI265322|mKIAA3006 zinc finger protein 871 protein-coding common_peak1_34_283_-0.468301404981148_7.91559641701411_3.01989751216769 chr11 100735633 100736334 + 3.01989751216769 NA intron (NM_001305003, intron 1 of 5) intron (NM_001305003, intron 1 of 5) 2232 NM_024456 19345 Mm.29829 NM_024456 ENSMUSG00000019173 Rab5c AI326010|Rabl RAB5C, member RAS oncogene family protein-coding common_peak1_57_485_-0.349536877906855_8.75004406465235_3.01967070815855 chr9 44567867 44568637 + 3.01967070815855 NA Intergenic Intergenic -36640 NM_001110826 13209 Mm.267061 NM_007841 ENSMUSG00000032097 Ddx6 1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein-coding common_peak2_488_4858_0.101535242957368_12.297211338596_3.01889824066158 chr13 98924297 98927802 + 3.01889824066158 NA intron (NM_178716, intron 1 of 23) CpG 335 NM_178716 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak1_91_808_-0.268310465963754_9.5258406594481_3.0186157918558 chr1 164074441 164076092 + 3.0186157918558 NA intron (NM_011346, intron 7 of 8) MIR|SINE|MIR 13190 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak1_91_808_-0.268310465963754_9.5258406594481_3.0186157918558-2 chr15 78581127 78582262 + 3.0186157918558 NA Intergenic Intergenic -8911 NM_009008 19354 Mm.1972 NM_009008 ENSMUSG00000033220 Rac2 AI323801|AI452260 RAS-related C3 botulinum substrate 2 protein-coding common_peak2_106_672_0.264507724745457_9.52671655698304_3.0186157918558 chr15 41446348 41448195 + 3.0186157918558 NA promoter-TSS (NM_001130166) promoter-TSS (NM_001130166) -211 NM_001130166 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_68_587_-0.317077024589569_9.04113383254158_3.01816243763252 chr14 121279872 121282054 + 3.01816243763252 NA exon (NM_134082, exon 26 of 27) exon (NM_134082, exon 26 of 27) 98267 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_77_438_0.321478631258859_8.93881644516479_3.01748353497787 chr1 80388942 80390262 + 3.01748353497787 NA Intergenic L1VL2|LINE|L1 -48912 NM_016716 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding common_peak1_16_45_0.879974304917159_5.96354910851559_3.0174654376981-2 chr12 86858870 86859196 + 3.0174654376981 NA Intergenic Intergenic 25781 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_16_45_0.879974304917159_5.96354910851559_3.0174654376981 chr10 7009996 7010336 + 3.0174654376981 NA intron (NM_001033391, intron 1 of 7) L1_Mus4|LINE|L1 13019 NM_001033391 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak2_82_720_-0.284349580072474_9.35168065920459_3.01704054527974 chr10 128535253 128537133 + 3.01704054527974 NA Intergenic Intergenic -10334 NM_011843 23943 Mm.66056 NM_011843 ENSMUSG00000025366 Esyt1 Fam62a|Mbc2|vp115 extended synaptotagmin-like protein 1 protein-coding common_peak2_254_2110_0.152065500658621_11.1197436136765_3.01644587298777 chr12 55154289 55156462 + 3.01644587298777 NA 5' UTR (NM_001100109, exon 1 of 16).2 5' UTR (NM_001100109, exon 1 of 16).2 271 NM_001100109 665155 Mm.12848 NM_001100109 ENSMUSG00000079108 Srp54b - signal recognition particle 54B protein-coding common_peak2_49_235_0.429984453960899_8.09763527634229_3.01639177525498 chr18 60732478 60733947 + 3.01639177525498 NA Intergenic Intergenic -19823 NM_008306 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_243_2464_-0.149627857845591_11.1925580023425_3.01606836751504 chr11 86355716 86358590 + 3.01606836751504 NA intron (NM_001080931, intron 1 of 29) intron (NM_001080931, intron 1 of 29) 372 NM_001080931 327987 Mm.341886 NM_001080931 ENSMUSG00000034297 Med13 1110067M05Rik|D030023K18|Thrap1|Trap240 mediator complex subunit 13 protein-coding common_peak2_460_4508_0.105042059518864_12.191112824397_3.01571975052069 chr8 25273114 25277027 + 3.01571975052069 NA Intergenic Intergenic 31200 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak1_36_152_0.522395808518758_7.51858574695203_3.01542989508993 chr4 53825967 53826654 + 3.01542989508993 NA intron (NM_028053, intron 1 of 5) CpG 265 NM_028053 52076 Mm.27184 NM_028053 ENSMUSG00000028420 Tmem38b 1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b transmembrane protein 38B protein-coding common_peak2_36_152_0.522395808518758_7.51858574695203_3.01542989508993 chr4 56221815 56222744 + 3.01542989508993 NA Intergenic Intergenic 519146 NM_025271 11471 Mm.251434 NM_025271 ENSMUSG00000070980 Actl7b Tact1 actin-like 7b protein-coding common_peak1_131_1214_-0.216196028459553_10.1386425842634_3.01537544426556 chr5 93135683 93137606 + 3.01537544426556 NA intron (NM_001310669, intron 1 of 10) intron (NM_001310669, intron 1 of 10) 43228 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_174_1292_0.193044741591599_10.4330289306061_3.01513886279791 chr11 98192311 98193996 + 3.01513886279791 NA promoter-TSS (NM_013634) promoter-TSS (NM_013634) 140 NM_134027 19014 Mm.12926 NM_013634 ENSMUSG00000018160 Med1 AI480703|CRSP210|DRIP205|PBP|Pparbp|TRAP220|l11Jus15 mediator complex subunit 1 protein-coding common_peak1_163_1556_-0.189885341640899_10.5096105582586_3.01496470882183 chr16 35938128 35939981 + 3.01496470882183 NA promoter-TSS (NM_001013371) promoter-TSS (NM_001013371) -27 NM_001013371 209200 Mm.390852 NM_001013371 ENSMUSG00000049502 Dtx3l AU042200|BC023741 deltex 3-like, E3 ubiquitin ligase protein-coding common_peak1_443_4297_0.107693022309622_12.1232962785826_3.01493357934087 chr10 19062550 19066033 + 3.01493357934087 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -48881 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding unique_peak1_11_24_1.14330696713102_5.21550967334023_3.01487716443559 chr4 63356332 63356708 + 3.01487716443559 NA intron (NM_013623, intron 1 of 5) intron (NM_013623, intron 1 of 5) 358 NM_013623 18407 Mm.381399 NM_013623 ENSMUSG00000028359 Orm3 Agp-3|Orm-3 orosomucoid 3 protein-coding unique_peak1_11_24_1.14330696713102_5.21550967334023_3.01487716443559-2 chr7 16018759 16019107 + 3.01487716443559 NA Intergenic B1F|SINE|Alu -19438 NM_001081418 243842 Mm.440249 NM_001081418 ENSMUSG00000070808 Gltscr1 - glioma tumor suppressor candidate region gene 1 protein-coding common_peak1_379_3523_0.118696203727508_11.8423463107842_3.01455879957952 chr17 48425524 48429242 + 3.01455879957952 NA intron (NM_009694, intron 1 of 2) intron (NM_009694, intron 1 of 2) 5345 NM_009694 11811 Mm.281793 NM_009694 ENSMUSG00000040694 Apobec2 Arp1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2 protein-coding common_peak2_103_927_-0.249335128113929_9.73331343107061_3.01435786896353 chr15 97820349 97823373 + 3.01435786896353 NA intron (NM_001204275, intron 1 of 24) intron (NM_001204275, intron 1 of 24) -6998 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_65_559_-0.325350758097731_8.9666076378961_3.01430047788712 chr7 98108208 98109797 + 3.01430047788712 NA intron (NM_001256081, intron 2 of 48) ID_B1|SINE|B4 246 NM_001256082 17921 Mm.1403 NM_008663 ENSMUSG00000030761 Myo7a Hdb|Myo7|USH1B|nmf371|polka|sh-1|sh1 myosin VIIA protein-coding common_peak1_146_1373_-0.203155535754131_10.322588520941_3.01363780283356 chr6 87037653 87039333 + 3.01363780283356 NA Intergenic Intergenic -4353 NM_013528 14583 Mm.19893 NM_013528 ENSMUSG00000029992 Gfpt1 2810423A18Rik|AI324119|AI449986|GFA|GFAT|GFAT1|GFAT1m|Gfpt glutamine fructose-6-phosphate transaminase 1 protein-coding common_peak1_45_378_-0.400980922891227_8.36556357672548_3.01358768677416 chr7 132808578 132809262 + 3.01358768677416 NA intron (NM_212473, intron 1 of 4) MIRb|SINE|MIR 4276 NM_212473 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak2_220_2196_-0.158777978374271_11.0219301652361_3.01328491717634 chr6 50565070 50567474 + 3.01328491717634 NA promoter-TSS (NR_027892) promoter-TSS (NR_027892) 202 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding common_peak2_59_504_-0.344870833855097_8.80770416071161_3.01224227561606 chr11 79041388 79043200 + 3.01224227561606 NA intron (NM_013571, intron 4 of 17) intron (NM_013571, intron 4 of 17) 18697 NR_045873 790910 Mm.440410 NR_045873 Gm11201 ENSMUSG00000072637|OTTMUSG00000000169 predicted gene 11201 ncRNA common_peak1_59_504_-0.344870833855097_8.80770416071161_3.01224227561606 chr17 51814043 51815207 + 3.01224227561606 NA intron (NM_001163632, intron 1 of 10) intron (NM_001163632, intron 1 of 10) -2571 NM_001163630 20230 Mm.311655 NM_009122 ENSMUSG00000023927 Satb1 2610306G12Rik|AW413156 special AT-rich sequence binding protein 1 protein-coding common_peak2_120_793_0.243571647492491_9.7547810208892_3.01192322470167 chr10 99240745 99243244 + 3.01192322470167 NA Intergenic Intergenic -21237 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_172_1654_-0.18340497020203_10.6009130165936_3.01170450414542 chr15 97830623 97832069 + 3.01170450414542 NA intron (NM_001204276, intron 1 of 25) CpG 421 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_42_189_0.475871561923003_7.80779138929245_3.0098502020131 chr1 42851035 42851905 + 3.0098502020131 NA intron (NM_023514, intron 1 of 10) CpG 237 NM_023514 69527 Mm.252982 NM_023514 ENSMUSG00000060679 Mrps9 2310002A08Rik|AW322516|Mrp-S9|S9mt|mg637 mitochondrial ribosomal protein S9 protein-coding common_peak1_39_326_-0.435400286680951_8.13544668215761_3.00846903835909 chr4 101249796 101250467 + 3.00846903835909 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 15151 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_130_1203_-0.216532414912828_10.1253534693033_3.00833105764823 chr13 73735867 73739982 + 3.00833105764823 NA Intergenic Intergenic -25773 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak1_17_145_-0.68513919700735_6.84725496037634_3.00800329670916-4 chr4 141860054 141860632 + 3.00800329670916 NA intron (NM_025994, intron 3 of 3) intron (NM_025994, intron 3 of 3) -13984 NM_001033875 76701 Mm.489680 NM_001033875 ENSMUSG00000062478 Ctrc 1810044E12Rik chymotrypsin C (caldecrin) protein-coding common_peak1_17_145_-0.68513919700735_6.84725496037634_3.00800329670916-5 chrX 8131564 8132097 + 3.00800329670916 NA 5' UTR (NM_028542, exon 2 of 9) 5' UTR (NM_028542, exon 2 of 9) 1028 NM_001290783 73447 Mm.284162 NM_026137 ENSMUSG00000031166 Wdr13 1700060B08Rik|5730411P10Rik|DXHXS7467e|W51679|mMg21 WD repeat domain 13 protein-coding common_peak1_17_145_-0.68513919700735_6.84725496037634_3.00800329670916-2 chr12 81594486 81594979 + 3.00800329670916 NA intron (NM_027213, intron 1 of 7) intron (NM_027213, intron 1 of 7) 226 NM_027213 69792 Mm.279993 NM_027213 ENSMUSG00000002679 Med6 1500012F11Rik|AU019660|AV213303 mediator complex subunit 6 protein-coding common_peak1_17_145_-0.68513919700735_6.84725496037634_3.00800329670916-3 chr18 70528932 70529364 + 3.00800329670916 NA intron (NM_011972, intron 1 of 9) intron (NM_011972, intron 1 of 9) 1173 NM_001136090 26447 Mm.244352 NM_011972 ENSMUSG00000038425 Poli Rad30b polymerase (DNA directed), iota protein-coding common_peak1_17_145_-0.68513919700735_6.84725496037634_3.00800329670916 chr1 161778729 161779107 + 3.00800329670916 NA Intergenic Intergenic 9577 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding unique_peak2_17_145_-0.68513919700735_6.84725496037634_3.00800329670916 chr9 108569387 108570524 + 3.00800329670916 NA promoter-TSS (NM_026378) promoter-TSS (NM_026378) 63 NM_026378 67789 Mm.458081 NM_026378 ENSMUSG00000019039 Dalrd3 6330580J24Rik|C77829|mir-425 DALR anticodon binding domain containing 3 protein-coding common_peak1_80_701_-0.288985137311682_9.31083465164872_3.00718523862626 chr11 52282014 52283379 + 3.00718523862626 NA promoter-TSS (NM_009331) promoter-TSS (NM_009331) -101 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak1_35_291_-0.458526885820994_7.96056111596952_3.00648364330931 chr3 75956167 75957047 + 3.00648364330931 NA 5' UTR (NM_175193, exon 1 of 15) 5' UTR (NM_175193, exon 1 of 15) 342 NM_175193 73124 Mm.249232 NM_175193 ENSMUSG00000034109 Golim4 3110027H23Rik|GIMPC|GPP130|Golph4|P138 golgi integral membrane protein 4 protein-coding common_peak1_52_255_0.415741765443112_8.20787088272156_3.00512585331604 chr17 31039653 31040648 + 3.00512585331604 NA Intergenic Intergenic -17544 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak2_19_160_-0.63978265048384_7.0110255528727_3.0049883720653 chr9 33728150 33728548 + 3.0049883720653 NA Intergenic CpG -314022 NR_040744 77119 Mm.367930 NR_040744 ENSMUSG00000098758 7630403G23Rik - RIKEN cDNA 7630403G23 gene ncRNA common_peak1_19_160_-0.63978265048384_7.0110255528727_3.0049883720653 chr7 66097609 66098027 + 3.0049883720653 NA Intergenic L1ME1|LINE|L1 -11697 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_107_967_-0.243431048062288_9.79714771324345_3.00495159721683 chr11 22981304 22982719 + 3.00495159721683 NA intron (NM_144514, intron 1 of 2) CpG 273 NM_144514 17846 Mm.259903 NM_144514 ENSMUSG00000051355 Commd1 AI256843|Murr1|U2/Mu COMM domain containing 1 protein-coding common_peak1_25_209_-0.55882427302519_7.43483338115353_3.0041980797973-2 chr2 32693692 32694106 + 3.0041980797973 NA intron (NM_010236, intron 1 of 14) CpG 276 NM_010236 14287 Mm.3830 NM_010236 ENSMUSG00000009566 Fpgs AA408187 folylpolyglutamyl synthetase protein-coding common_peak1_25_209_-0.55882427302519_7.43483338115353_3.0041980797973 chr13 95987798 95988285 + 3.0041980797973 NA intron (NM_029210, intron 6 of 12) intron (NM_029210, intron 6 of 12) -96119 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding unique_peak2_25_209_-0.55882427302519_7.43483338115353_3.0041980797973 chrX 48442755 48444162 + 3.0041980797973 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 19674 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding unique_peak2_31_258_-0.493942713375031_7.76983693099904_3.00400859911324 chr18 70640001 70641387 + 3.00400859911324 NA Intergenic Intergenic 72402 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak2_243_1993_0.156294379021487_11.0395968839089_3.00400204178432 chr2 30689850 30694464 + 3.00400204178432 NA Intergenic Intergenic -29053 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_101_906_-0.25067565221471_9.69962091442117_3.00389278788396 chr15 93275401 93276313 + 3.00389278788396 NA promoter-TSS (NM_001033275) promoter-TSS (NM_001033275) -773 NM_001033275 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak1_14_122_-0.760470383927892_6.56227931337529_3.0035980655618-5 chr8 79030470 79030754 + 3.0035980655618 NA intron (NM_001294279, intron 1 of 14) CpG 2175 NM_178267 622675 Mm.48724 NM_178267 ENSMUSG00000071064 Zfp827 2810449M09Rik|D630040G17Rik|Znf827 zinc finger protein 827 protein-coding common_peak1_14_122_-0.760470383927892_6.56227931337529_3.0035980655618-2 chr16 62847140 62847534 + 3.0035980655618 NA promoter-TSS (NM_026577) promoter-TSS (NM_026577) -297 NM_026577 68146 Mm.96833 NM_026577 ENSMUSG00000022911 Arl13b A530097K21Rik|A930014M17Rik|Arl2l1|C530009C10Rik|hnn ADP-ribosylation factor-like 13B protein-coding common_peak1_14_122_-0.760470383927892_6.56227931337529_3.0035980655618-3 chr19 57078937 57079417 + 3.0035980655618 NA intron (NM_001103178, intron 3 of 19) intron (NM_001103178, intron 3 of 19) 39847 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_14_122_-0.760470383927892_6.56227931337529_3.0035980655618 chr1 37327112 37327439 + 3.0035980655618 NA intron (NM_001290797, intron 1 of 25) intron (NM_001290797, intron 1 of 25) 27437 NM_001290797 269180 Mm.5294 NM_030266 ENSMUSG00000026113 Inpp4a 107kDa|9630012D15|D130048C09Rik|R74740 inositol polyphosphate-4-phosphatase, type I protein-coding common_peak1_14_122_-0.760470383927892_6.56227931337529_3.0035980655618-4 chr2 29802607 29803018 + 3.0035980655618 NA 5' UTR (NM_011989, exon 1 of 13) 5' UTR (NM_011989, exon 1 of 13) 132 NM_011989 26569 Mm.330113 NM_011989 ENSMUSG00000059316 Slc27a4 BB144259|FATP4 solute carrier family 27 (fatty acid transporter), member 4 protein-coding unique_peak2_14_122_-0.760470383927892_6.56227931337529_3.0035980655618 chr18 82914432 82915277 + 3.0035980655618 NA intron (NM_001177464, intron 1 of 5) G-rich|Low_complexity|Low_complexity 222 NM_001177464 329003 Mm.326526 NM_183033 ENSMUSG00000058881 Zfp516 C330029B10Rik|D230016L03|Zfp26l|Znf516|mKIAA0222 zinc finger protein 516 protein-coding common_peak1_23_192_-0.578681569175986_7.30311625268009_3.00345174152258 chr2 166220445 166221002 + 3.00345174152258 NA Intergenic RMER17A2|LTR|ERVK -53185 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 OTTMUSG00000001131 predicted gene 11468 ncRNA common_peak2_141_1319_-0.206550357212443_10.2630470356396_3.00332026080826 chr7 16285043 16287270 + 3.00332026080826 NA intron (NM_001136471, intron 1 of 13) intron (NM_001136471, intron 1 of 13) 639 NM_001136471 243846 Mm.482401 NM_172297 ENSMUSG00000041375 Ccdc9 2600011L02Rik coiled-coil domain containing 9 protein-coding common_peak2_95_847_-0.260920364098391_9.597460272514_3.00270656837887 chr18 80168796 80170642 + 3.00270656837887 NA Intergenic Intergenic -16520 NR_131039 105246506 Mm.392326 NR_131039 LOC105246506 - uncharacterized LOC105246506 ncRNA common_peak2_143_1000_0.217296036595743_10.0758742771339_3.002506773536 chr13 30544426 30546171 + 3.002506773536 NA promoter-TSS (NM_025710) promoter-TSS (NM_025710) 18 NM_025710 66694 Mm.181933 NM_025710 ENSMUSG00000038462 Uqcrfs1 4430402G14Rik|AI875505 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding common_peak2_171_1643_-0.18404279105502_10.5909731881542_3.00249642767905 chr18 38364447 38368254 + 3.00249642767905 NA Intergenic Intergenic -27357 NM_011937 26384 Mm.22374 NM_011937 ENSMUSG00000052102 Gnpda1 GNPDA|Gnp1|Gnpi|oscillin glucosamine-6-phosphate deaminase 1 protein-coding common_peak1_28_233_-0.521701405070837_7.60951401704799_3.00212376900521 chr2 84677585 84678074 + 3.00212376900521 NA promoter-TSS (NM_025885) promoter-TSS (NM_025885) 345 NM_001290751 66958 Mm.371621 NM_025868 ENSMUSG00000050043 Tmx2 2310042M24Rik|AA589631|Txndc14 thioredoxin-related transmembrane protein 2 protein-coding unique_peak2_28_233_-0.521701405070837_7.60951401704799_3.00212376900521 chr14 121912051 121913705 + 3.00212376900521 NA intron (NM_182806, intron 1 of 1) intron (NM_182806, intron 1 of 1) 2896 NM_182806 110168 Mm.37405 NM_182806 ENSMUSG00000050350 Gpr18 - G protein-coupled receptor 18 protein-coding common_peak2_28_233_-0.521701405070837_7.60951401704799_3.00212376900521 chr1 134987356 134988476 + 3.00212376900521 NA exon (NM_001033409, exon 18 of 18) exon (NM_001033409, exon 18 of 18) 25351 NM_001278115 67196 Mm.284587 NM_026024 ENSMUSG00000026429 Ube2t 2700084L22Rik|C80607 ubiquitin-conjugating enzyme E2T protein-coding common_peak1_40_334_-0.42657402027971_8.17473027520528_3.00170738516074 chr16 91441683 91442337 + 3.00170738516074 NA Intergenic Intergenic -23094 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak2_104_656_0.265830670354489_9.49266489549957_3.00137285765356 chr2 60808866 60811419 + 3.00137285765356 NA intron (NM_001141931, intron 2 of 13) intron (NM_001141931, intron 2 of 13) 71296 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_133_1234_-0.21313931513596_10.1637256689041_3.00113442557296 chr11 80080310 80081728 + 3.00113442557296 NA promoter-TSS (NM_001277106) promoter-TSS (NM_001277106) -28 NM_018776 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding common_peak1_84_493_0.303274616267814_9.10000453971858_3.00105555174706 chr11 117076336 117077496 + 3.00105555174706 NA promoter-TSS (NR_105853) promoter-TSS (NR_105853) 133 NR_027059 76972 Mm.309167 NR_027059 ENSMUSG00000086859 Snhg20 2810008D09Rik small nucleolar RNA host gene 20 ncRNA common_peak1_37_158_0.514093559298891_7.5699297349338_3.00088678716149-2 chr14 121343703 121344594 + 3.00088678716149 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 35082 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_37_158_0.514093559298891_7.5699297349338_3.00088678716149 chr5 121593106 121594241 + 3.00088678716149 NA 5' UTR (NM_009656, exon 1 of 13) 5' UTR (NM_009656, exon 1 of 13) 151 NM_009656 11669 Mm.284446 NM_009656 ENSMUSG00000029455 Aldh2 AHD-M1|ALDH-E2|ALDHI|Ahd-5|Ahd5 aldehyde dehydrogenase 2, mitochondrial protein-coding common_peak1_37_158_0.514093559298891_7.5699297349338_3.00088678716149 chr14 8517563 8518363 + 3.00088678716149 NA exon (NM_028934, exon 9 of 16) exon (NM_028934, exon 9 of 16) -139200 NM_146050 18300 Mm.25351 NM_146050 ENSMUSG00000021749 Oit1 2310076N21Rik|AV067083|EF-7|Fam3d oncoprotein induced transcript 1 protein-coding common_peak1_139_963_0.221781000666285_10.0237798365631_3.00072807365723 chr17 48417252 48419028 + 3.00072807365723 NA TTS (NM_001289490) TTS (NM_001289490) 8140 NM_207219 106821 Mm.203943 NM_207219 ENSMUSG00000040771 Oard1 AI314976|AW558560 O-acyl-ADP-ribose deacylase 1 protein-coding unique_peak2_53_262_0.409900888733649_8.24386943365913_3.00019022268276 chr8 94457573 94459545 + 3.00019022268276 NA Intergenic ID2|SINE|ID -14204 NM_001033207 434341 Mm.334720 NM_001033207 ENSMUSG00000074151 Nlrc5 AI451557|AK220210|NOD27 NLR family, CARD domain containing 5 protein-coding common_peak2_53_262_0.409900888733649_8.24386943365913_3.00019022268276 chr11 22871272 22872592 + 3.00019022268276 NA Intergenic Intergenic -11596 NM_001169114 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak2_98_606_0.275901757558483_9.38350358503492_2.99986755372093 chr15 98762081 98763721 + 2.99986755372093 NA intron (NM_007478, intron 1 of 4) CpG 217 NM_007478 11842 Mm.221298 NM_007478 ENSMUSG00000051853 Arf3 5430400P17Rik|AI854770 ADP-ribosylation factor 3 protein-coding common_peak1_401_3787_0.114069912020977_11.9442555714789_2.9990502461089 chr1 134092224 134096053 + 2.9990502461089 NA Intergenic Intergenic -14983 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding common_peak1_111_1007_-0.237490551109278_9.85853464794528_2.99842894848533 chr19 10604911 10606131 + 2.99842894848533 NA promoter-TSS (NM_015735) promoter-TSS (NM_015735) -104 NM_015735 13194 Mm.289915 NM_015735 ENSMUSG00000024740 Ddb1 127kDa|AA408517|p127-Ddb1 damage specific DNA binding protein 1 protein-coding common_peak1_127_855_0.23462321028309_9.85877859154269_2.99842894848493 chr18 67204866 67206416 + 2.99842894848493 NA exon (NM_024190, exon 1 of 1) exon (NM_024190, exon 1 of 1) 282 NM_024190 67064 Mm.73777 NM_024190 ENSMUSG00000109901 Chmp1b 2810405I11Rik|Chmp1b1 charged multivesicular body protein 1B protein-coding common_peak2_357_3265_0.122847821047429_11.7347329860854_2.99767676024927 chr5 8673010 8679078 + 2.99767676024927 NA intron (NM_011076, intron 4 of 27) intron (NM_011076, intron 4 of 27) 15952 NM_011076 18671 Mm.207354 NM_011076 ENSMUSG00000040584 Abcb1a Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3 ATP-binding cassette, sub-family B (MDR/TAP), member 1A protein-coding common_peak1_21_176_-0.607807807389046_7.16370164638847_2.99735239222121 chr4 88787864 88788361 + 2.99735239222121 NA promoter-TSS (NM_001161609).7 promoter-TSS (NM_001161609).7 135 NM_001098840 545650 Mm.473677 NM_001098840 ENSMUSG00000100234 Gm13277 OTTMUSG00000011270 predicted gene 13277 protein-coding common_peak1_18_54_0.81900448987223_6.19086195846078_2.99716155392261 chr11 86608416 86608988 + 2.99716155392261 NA intron (NM_029478, intron 8 of 11) B2_Mm2|SINE|B2 -24544 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_18_54_0.81900448987223_6.19086195846078_2.99716155392261-3 chr17 63498312 63498726 + 2.99716155392261 NA intron (NM_015794, intron 1 of 8) intron (NM_015794, intron 1 of 8) 2061 NM_015794 50758 Mm.136366 NM_015794 ENSMUSG00000023965 Fbxl17 6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13 F-box and leucine-rich repeat protein 17 protein-coding common_peak1_18_54_0.81900448987223_6.19086195846078_2.99716155392261-2 chr13 73748782 73749331 + 2.99716155392261 NA Intergenic ID_B1|SINE|B4 -14641 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding unique_peak1_18_54_0.81900448987223_6.19086195846078_2.99716155392261-2 chr6 130028137 130028726 + 2.99716155392261 NA intron (NM_013793, intron 6 of 7) RMER5|LTR|ERV1 -1471 NM_053154 93971 Mm.14112 NM_053154 Klra19 Ly49s killer cell lectin-like receptor, subfamily A, member 19 protein-coding unique_peak1_18_54_0.81900448987223_6.19086195846078_2.99716155392261 chr14 77858553 77858899 + 2.99716155392261 NA intron (NM_025384, intron 1 of 5) ORR1A4|LTR|ERVL-MaLR 16191 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding common_peak1_33_134_0.553332975109696_7.35348208460568_2.99689541903309-3 chr9 57277484 57278155 + 2.99689541903309 NA Intergenic Intergenic -15220 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding common_peak1_33_134_0.553332975109696_7.35348208460568_2.99689541903309-2 chr6 135065526 135066149 + 2.99689541903309 NA intron (NM_181444, intron 1 of 3) CpG 175 NM_181444 232431 Mm.23575 NM_181444 ENSMUSG00000046733 Gprc5a Rai3|Raig1 G protein-coupled receptor, family C, group 5, member A protein-coding common_peak1_33_134_0.553332975109696_7.35348208460568_2.99689541903309 chr13 115101064 115101817 + 2.99689541903309 NA intron (NM_001033228, intron 1 of 28) intron (NM_001033228, intron 1 of 28) 524 NM_001033228 109700 Mm.317280 NM_001033228 ENSMUSG00000042284 Itga1 CD49A|E130012M19Rik|Vla1 integrin alpha 1 protein-coding common_peak1_83_485_0.30588676256543_9.0777558848885_2.99671595792061 chr16 78490136 78491410 + 2.99671595792061 NA Intergenic L1M2|LINE|L1 -69543 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak2_367_3383_0.120396195718982_11.7847119509794_2.99589651252865 chr1 64119927 64122855 + 2.99589651252865 NA promoter-TSS (NM_033563) promoter-TSS (NM_033563) -2 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding common_peak1_24_84_0.676624255998682_6.74770306413704_2.99539082840209 chr13 55016047 55016509 + 2.99539082840209 NA intron (NM_001206392, intron 1 of 17) intron (NM_001206392, intron 1 of 17) 4541 NM_001206390 212032 Mm.267479 NM_001033245 ENSMUSG00000025877 Hk3 HK III|HK-III hexokinase 3 protein-coding common_peak1_24_84_0.676624255998682_6.74770306413704_2.99539082840209-2 chr2 167338203 167338854 + 2.99539082840209 NA intron (NM_019835, intron 1 of 8) intron (NM_019835, intron 1 of 8) 10650 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak2_317_2805_0.132189299162853_11.5203939432013_2.99415950091139 chr2 174326966 174332024 + 2.99415950091139 NA promoter-TSS (NM_001077510) promoter-TSS (NM_001077510) -575 NM_201616 14683 Mm.125770 NM_010309 ENSMUSG00000027523 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus protein-coding common_peak1_142_991_0.217994036195552_10.0631933284847_2.99331463076583 chr2 172977053 172978519 + 2.99331463076583 NA Intergenic Intergenic -2056 NM_012046 26972 Mm.23495 NM_012046 ENSMUSG00000005883 Spo11 AI449549|Spo11a|Spo11b SPO11 meiotic protein covalently bound to DSB protein-coding common_peak1_43_196_0.464358234423931_7.85423093666834_2.99294061088848 chr14 14351550 14352228 + 2.99294061088848 NA intron (NM_008369, intron 9 of 11) intron (NM_008369, intron 9 of 11) 5394 NM_008369 16188 Mm.425857 NM_008369 ENSMUSG00000068758 Il3ra CD123|CDw123|SUT-1 interleukin 3 receptor, alpha chain protein-coding common_peak2_176_1698_-0.180809215989111_10.6400655291897_2.99255628406808 chr10 44456264 44460055 + 2.99255628406808 NA intron (NM_007548, intron 1 of 6) intron (NM_007548, intron 1 of 6) 589 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding common_peak2_159_1149_0.203553015358107_10.2691946535108_2.99237475131492 chr3 90051242 90052696 + 2.99237475131492 NA promoter-TSS (NM_025762) promoter-TSS (NM_025762) 333 NM_001287087 99650 Mm.300083 NM_025762 ENSMUSG00000027942 4933434E20Rik 5730552F22Rik|AI462154|NICE-3|NS5ATP4 RIKEN cDNA 4933434E20 gene protein-coding common_peak2_97_598_0.277076355308255_9.36495037044291_2.99234663083896 chr10 80756651 80759672 + 2.99234663083896 NA intron (NM_199322, intron 1 of 27) ID_B1|SINE|B4 2955 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak1_99_886_-0.253550479791969_9.66601505440508_2.99066938756265 chr11 53706480 53707894 + 2.99066938756265 NA 5' UTR (NM_009012, exon 1 of 25) 5' UTR (NM_009012, exon 1 of 25) 132 NM_009012 19360 Mm.4888 NM_009012 ENSMUSG00000020380 Rad50 Mrell|Rad50l RAD50 double strand break repair protein protein-coding common_peak1_49_413_-0.380859454176584_8.50305723041103_2.98954975898191 chr17 44777043 44777851 + 2.98954975898191 NA intron (NM_178652, intron 1 of 11) CpG 276 NM_178652 109115 Mm.431327 NM_178652 ENSMUSG00000038954 Supt3 2310066G22Rik|AI315192|SPT3|SPT3L|Supt3h suppressor of Ty 3 protein-coding common_peak2_44_202_0.460842720379455_7.8957572773749_2.9892255157775 chr19 15984285 15985101 + 2.9892255157775 NA promoter-TSS (NR_045355) promoter-TSS (NR_045355) 296 NM_198019 208518 Mm.105652 NM_198019 ENSMUSG00000041491 Cep78 5730599I05Rik|D030027P05 centrosomal protein 78 protein-coding common_peak1_57_290_0.390400282790642_8.3800754843036_2.98918117590959 chr11 19988611 19989199 + 2.98918117590959 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 64463 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak2_130_882_0.230817634198408_9.90167844474767_2.98894013254194 chr10 96407062 96409190 + 2.98894013254194 NA Intergenic Intergenic 181919 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_81_469_0.311538629686783_9.03228626140839_2.98885780380937 chr10 59323162 59324093 + 2.98885780380937 NA intron (NM_001316370, intron 1 of 13) CpG 331 NM_001316370 18451 Mm.2212 NM_011030 ENSMUSG00000019916 P4ha1 AL022634|P4ha procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide protein-coding common_peak1_594_6233_0.089235517492595_12.6505601983717_2.9886010915959 chr17 6423789 6428646 + 2.9886010915959 NA Intergenic Intergenic -3895 NM_009342 21648 Mm.1948 NM_009342 ENSMUSG00000096255 Dynlt1b AGS2|Dynlt1|Tctex-1|Tctex1 dynein light chain Tctex-type 1B protein-coding common_peak2_38_164_0.506621235362045_7.61963283192684_2.98840729839678 chr3 27258353 27259167 + 2.98840729839678 NA Intergenic MuRRS-int|LTR|ERV1 -58317 NM_009425 22035 Mm.1062 NM_009425 ENSMUSG00000039304 Tnfsf10 A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Tnlg6a|Trail tumor necrosis factor (ligand) superfamily, member 10 protein-coding common_peak2_224_1795_0.163712589701806_10.892427929592_2.98839292176719 chr9 64736168 64738321 + 2.98839292176719 NA intron (NM_017382, intron 1 of 4) intron (NM_017382, intron 1 of 4) 512 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding common_peak2_126_847_0.234290239610846_9.84506557436862_2.9875971871934 chr19 5294537 5296284 + 2.9875971871934 NA promoter-TSS (NM_030109) promoter-TSS (NM_030109) 45 NM_030109 319322 Mm.196532 NM_030109 ENSMUSG00000024853 Sf3b2 145kDa|2610311M13Rik|2810441F20Rik|B230398H18Rik|SAP145|SF3b1|SF3b145|SF3b150 splicing factor 3b, subunit 2 protein-coding common_peak2_74_643_-0.300767169824951_9.18053329320214_2.98753401451312 chr4 59804987 59807174 + 2.98753401451312 NA exon (NM_172468, exon 1 of 9) exon (NM_172468, exon 1 of 9) 430 NM_172468 209131 Mm.259705 NM_172468 ENSMUSG00000028385 Snx30 4732481H14Rik|C030041J06Rik sorting nexin family member 30 protein-coding common_peak1_41_343_-0.422177799717243_8.21517585484348_2.98697303467936-2 chr4 59003162 59003717 + 2.98697303467936 NA exon (NM_001033165, exon 1 of 4) exon (NM_001033165, exon 1 of 4) 246 NM_001033165 72429 Mm.317801 NM_001033165 ENSMUSG00000070972 Dnajc25 2010109C08Rik|2010203O07Rik DnaJ heat shock protein family (Hsp40) member C25 protein-coding common_peak1_41_343_-0.422177799717243_8.21517585484348_2.98697303467936 chr11 97107926 97108631 + 2.98697303467936 NA intron (NM_019507, intron 1 of 5) B3|SINE|B2 7053 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding common_peak2_26_216_-0.539343665604885_7.49187939964204_2.98684712843378 chr13 49652216 49652941 + 2.98684712843378 NA promoter-TSS (NR_073168) promoter-TSS (NR_073168) 153 NM_025495 66336 Mm.440323 NM_025495 ENSMUSG00000021391 Cenpp 1700022C02Rik|4921518G09Rik centromere protein P protein-coding common_peak2_32_266_-0.483375984026675_7.81900793967422_2.98592307036154-2 chr11 97315143 97316432 + 2.98592307036154 NA promoter-TSS (NM_025927) promoter-TSS (NM_025927) 71 NM_025927 67036 Mm.5381 NM_025927 ENSMUSG00000018882 Mrpl45 2600005P05Rik|AU043542|R75241 mitochondrial ribosomal protein L45 protein-coding common_peak2_32_266_-0.483375984026675_7.81900793967422_2.98592307036154 chr11 77195289 77197014 + 2.98592307036154 NA Intergenic Intergenic -7183 NM_176965 319634 Mm.108786 NM_176965 ENSMUSG00000050944 Efcab5 4930563A03Rik EF-hand calcium binding domain 5 protein-coding common_peak2_333_2988_0.127911735196221_11.6094030492762_2.9853182032401 chr7 127140402 127147205 + 2.9853182032401 NA Intergenic PB1|SINE|Alu -5980 NM_001037810 20737 Mm.283714 NM_009259 ENSMUSG00000051457 Spn A630014B01Rik|Cd43|Galgp|Ly-48|Ly48 sialophorin protein-coding common_peak1_117_768_0.245298928266354_9.709489252095_2.98453895141929 chr11 40691825 40692916 + 2.98453895141929 NA intron (NM_001199274, intron 1 of 6) CpG 312 NM_134017 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak2_27_100_0.628353267266131_6.97238811638486_2.98271510910574 chr1 151960393 151961256 + 2.98271510910574 NA intron (NM_197990, intron 3 of 5) intron (NM_197990, intron 3 of 5) 129496 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak2_27_100_0.628353267266131_6.97238811638486_2.98271510910574-2 chr3 100439271 100440077 + 2.98271510910574 NA Intergenic Intergenic 13269 NR_040543 73806 Mm.396549 NR_040543 ENSMUSG00000086923 4930406D18Rik - RIKEN cDNA 4930406D18 gene ncRNA unique_peak2_27_100_0.628353267266131_6.97238811638486_2.98271510910574 chr12 71932532 71933263 + 2.98271510910574 NA intron (NM_001286452, intron 3 of 24) intron (NM_001286452, intron 3 of 24) 43354 NM_001286452 208846 Mm.87417 NM_026102 ENSMUSG00000034574 Daam1 - dishevelled associated activator of morphogenesis 1 protein-coding common_peak2_27_100_0.628353267266131_6.97238811638486_2.98271510910574-3 chr9 65547641 65548433 + 2.98271510910574 NA Intergenic Intergenic 32050 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_27_100_0.628353267266131_6.97238811638486_2.98271510910574 chr6 118455125 118455703 + 2.98271510910574 NA promoter-TSS (NM_028335) promoter-TSS (NM_028335) 92 NM_028335 72720 Mm.212572 NM_028335 ENSMUSG00000030145 Zfp248 2810037F07Rik|E130106N01Rik zinc finger protein 248 protein-coding unique_peak2_42_351_-0.413704448383346_8.25257939444562_2.98251570027089 chrX 50601565 50603772 + 2.98251570027089 NA intron (NR_015505, intron 8 of 19) intron (NR_015505, intron 8 of 19) 32653 NR_015505 103012 Mm.482523 NR_015505 ENSMUSG00000085396 Firre 5830467J12Rik|6720401G13Rik|AW048145 functional intergenic repeating RNA element ncRNA common_peak1_42_351_-0.413704448383346_8.25257939444562_2.98251570027089 chr17 78936544 78937100 + 2.98251570027089 NA promoter-TSS (NM_028611) promoter-TSS (NM_028611) 248 NM_001024806 12607 Mm.24169 NM_009882 ENSMUSG00000024081 Cebpz AI848081|CBF2|Cbf|Cebpa-rs1 CCAAT/enhancer binding protein zeta protein-coding common_peak1_52_439_-0.365617948081548_8.59855073948389_2.98180413772773 chr17 6777608 6778320 + 2.98180413772773 NA intron (NM_009510, intron 1 of 12) ID_B1|SINE|B4 4816 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak1_13_114_-0.785537612112805_6.45272124488797_2.98180199283534 chr2 143841035 143841367 + 2.98180199283534 NA intron (NM_001291061, intron 5 of 7) intron (NM_001291061, intron 5 of 7) 21972 NM_009751 12075 Mm.275937 NM_009751 ENSMUSG00000027420 Bfsp1 CP95 beaded filament structural protein 1, in lens-CP94 protein-coding unique_peak2_13_114_-0.785537612112805_6.45272124488797_2.98180199283534 chr10 79554541 79555359 + 2.98180199283534 NA intron (NM_027422, intron 1 of 13) CpG 178 NM_001316699 70427 Mm.334193 NM_027422 ENSMUSG00000042570 Mier2 2700087H15Rik|mKIAA1193 MIER family member 2 protein-coding common_peak1_244_2474_-0.148230986065329_11.1990973168217_2.98164293051318 chr5 113906753 113908750 + 2.98164293051318 NA intron (NM_011779, intron 1 of 10) intron (NM_011779, intron 1 of 10) 955 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_72_624_-0.30539335316382_9.13501570296754_2.98162944246959 chr14 69284480 69285290 + 2.98162944246959 NA exon (NM_026331, exon 1 of 4) exon (NM_026331, exon 1 of 4) 218 NM_026331 67712 Mm.293635 NM_026331 ENSMUSG00000034248 Slc25a37 1700020E22Rik|4930513O14Rik|4930526G11Rik|AI848481|C330015G08Rik|Mfrn|Mfrn1|Mscp|frascati|mitoferrin solute carrier family 25, member 37 protein-coding common_peak1_72_624_-0.30539335316382_9.13501570296754_2.98162944246959-2 chr16 93777159 93778441 + 2.98162944246959 NA intron (NM_027293, intron 23 of 36) intron (NM_027293, intron 23 of 36) -54321 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak1_72_624_-0.30539335316382_9.13501570296754_2.98162944246959-3 chrX 48208037 48209347 + 2.98162944246959 NA promoter-TSS (NM_172465) promoter-TSS (NM_172465) 10 NM_172465 208884 Mm.207367 NM_172465 ENSMUSG00000036985 Zdhhc9 6430508G22|9530098M12Rik zinc finger, DHHC domain containing 9 protein-coding common_peak2_60_312_0.374500604114354_8.47726914898979_2.98101888252589 chr3 27461624 27463216 + 2.98101888252589 NA intron (NM_173182, intron 16 of 25) intron (NM_173182, intron 16 of 25) 91069 NM_177330 208188 Mm.194721 NM_177330 ENSMUSG00000051136 Ghsr C530020I22Rik|Ghsr1a growth hormone secretagogue receptor protein-coding common_peak1_91_807_-0.266526056285572_9.52494845460901_2.98055825416987 chr18 25168398 25169474 + 2.98055825416987 NA promoter-TSS (NM_001004361) promoter-TSS (NM_001004361) -59 NM_001004361 66648 Mm.263189 NM_001004361 ENSMUSG00000024269 Tpgs2 5730437P09Rik|5730494M16Rik|AI666318|Pgs2 tubulin polyglutamylase complex subunit 2 protein-coding common_peak1_58_298_0.38152473084372_8.41476403961996_2.98046494151014 chr11 101666704 101667527 + 2.98046494151014 NA exon (NM_025404, exon 2 of 2) exon (NM_025404, exon 2 of 2) 1574 NM_025404 80981 Mm.266840 NM_025404 ENSMUSG00000034936 Arl4d 1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5 ADP-ribosylation factor-like 4D protein-coding common_peak2_58_298_0.38152473084372_8.41476403961996_2.98046494151014 chr3 104637945 104639649 + 2.98046494151014 NA 5' UTR (NM_009196, exon 1 of 5) 5' UTR (NM_009196, exon 1 of 5) 133 NM_009196 20501 Mm.9086 NM_009196 ENSMUSG00000032902 Slc16a1 AL022710|Mct1 solute carrier family 16 (monocarboxylic acid transporters), member 1 protein-coding common_peak1_59_305_0.377880901091409_8.44632829323836_2.98043714460388 chr4 125029741 125030676 + 2.98043714460388 NA intron (NM_145552, intron 1 of 15) CpG 194 NM_145552 230737 Mm.90760 NM_145552 ENSMUSG00000028869 Gnl2 BC003262|HUMAUANTIG|Ngp-1 guanine nucleotide binding protein-like 2 (nucleolar) protein-coding common_peak2_51_431_-0.37285394633618_8.56846052899538_2.97900214042975 chr17 34170880 34171984 + 2.97900214042975 NA Intergenic MTD|LTR|ERVL-MaLR 15898 NM_013585 16912 Mm.390983 NM_013585 ENSMUSG00000096727 Psmb9 Lmp-2|Lmp2 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) protein-coding common_peak2_333_3556_-0.123086342187534_11.7349020879681_2.97877655923793 chr10 26797423 26802083 + 2.97877655923793 NA intron (NM_176837, intron 1 of 14) intron (NM_176837, intron 1 of 14) 27241 NM_176837 73910 Mm.356496 NM_176837 ENSMUSG00000039031 Arhgap18 4833419J07Rik|AI314906|AI843501 Rho GTPase activating protein 18 protein-coding common_peak1_30_117_0.584039155372465_7.17466262704807_2.97874755004087 chr18 80499562 80499981 + 2.97874755004087 NA Intergenic Intergenic -30104 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding common_peak2_88_525_0.294099379471886_9.18596867902825_2.97831690738793 chrX 48447067 48450022 + 2.97831690738793 NA intron (NM_019680, intron 1 of 8) B1_Mur3|SINE|Alu 14588 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak2_53_448_-0.361751756715195_8.62969575638355_2.97827866707747 chr7 100159025 100160131 + 2.97827866707747 NA exon (NM_026010, exon 1 of 2) exon (NM_026010, exon 1 of 2) 301 NM_026010 67164 Mm.46777 NM_026010 ENSMUSG00000030725 Lipt2 2610209A20Rik lipoyl(octanoyl) transferase 2 (putative) protein-coding common_peak1_164_1197_0.199013341750415_10.325918863664_2.97816680191505 chr4 46484745 46486364 + 2.97816680191505 NA Intergenic Intergenic -3775 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding common_peak2_164_1197_0.199013341750415_10.325918863664_2.97816680191505 chr1 91078961 91082006 + 2.97816680191505 NA intron (NM_008515, intron 6 of 22) intron (NM_008515, intron 6 of 22) 27039 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_29_241_-0.510206804676892_7.66375983493615_2.97779331734573 chr8 72132770 72133477 + 2.97779331734573 NA Intergenic Intergenic -2169 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak2_130_1202_-0.215333665329203_10.1247540945115_2.97717308456191 chr3 103771858 103774451 + 2.97717308456191 NA intron (NM_010432, intron 2 of 15) intron (NM_010432, intron 2 of 15) 18121 NM_001301306 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding common_peak2_70_605_-0.310014437625934_9.08816676465998_2.97692876308481 chr2 31726596 31729008 + 2.97692876308481 NA intron (NM_001283047, intron 2 of 11) MER74B|LTR|ERVL -32137 NM_009594 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak2_79_454_0.31463611491743_8.98704079254477_2.97690762545595 chr2 180725023 180727524 + 2.97690762545595 NA intron (NM_183161, intron 1 of 12) intron (NM_183161, intron 1 of 12) 934 NM_183161 228993 Mm.87189 NM_183161 ENSMUSG00000023393 Slc17a9 1700019H03Rik|BC019537|Vnut solute carrier family 17, member 9 protein-coding common_peak2_168_1609_-0.18503112447257_10.5603294107657_2.97673714327912 chr5 151367776 151370139 + 2.97673714327912 NA intron (NR_045700, intron 1 of 3) CpG 282 NR_045699 625175 Mm.443286 NR_045699 ENSMUSG00000097321 1700028E10Rik A630054D14|Gm6561 RIKEN cDNA 1700028E10 gene ncRNA unique_peak2_34_140_0.54189436212474_7.41049853346116_2.97625721084081-2 chr4 117972290 117973392 + 2.97625721084081 NA intron (NM_001285520, intron 5 of 11) intron (NM_001285520, intron 5 of 11) -43078 NM_001284192 11876 Mm.56897 NM_009711 ENSMUSG00000028539 Artn neublastin artemin protein-coding common_peak2_34_140_0.54189436212474_7.41049853346116_2.97625721084081 chr2 174438440 174439525 + 2.97625721084081 NA promoter-TSS (NM_022325) promoter-TSS (NM_022325) 57 NM_022325 64138 Mm.156919 NM_022325 ENSMUSG00000016256 Ctsz AI787083|AU019819|CTSX|D2Wsu143e cathepsin Z protein-coding unique_peak2_34_140_0.54189436212474_7.41049853346116_2.97625721084081 chr10 59514547 59515802 + 2.97625721084081 NA intron (NM_001033259, intron 1 of 7) intron (NM_001033259, intron 1 of 7) -73395 NM_010959 18302 Mm.123013 NM_010959 ENSMUSG00000009654 Oit3 EF-9|LZP oncoprotein induced transcript 3 protein-coding common_peak1_171_1642_-0.183164972323411_10.5905342787884_2.97584925814645 chr5 122391855 122392812 + 2.97584925814645 NA intron (NM_019824, intron 1 of 6) intron (NM_019824, intron 1 of 6) 405 NM_019824 56378 Mm.275942 NM_019824 ENSMUSG00000029465 Arpc3 1110006A04Rik|p21-ARC|p21-Ar|p21Arc actin related protein 2/3 complex, subunit 3 protein-coding common_peak2_45_209_0.450827597613743_7.93965931647299_2.97567446572671 chr15 85859069 85860198 + 2.97567446572671 NA promoter-TSS (NM_001168672) promoter-TSS (NM_001168672) -74 NM_001168672 29870 Mm.20858 NM_013882 ENSMUSG00000022385 Gtse1 B99|Gtse-1 G two S phase expressed protein 1 protein-coding common_peak1_22_74_0.70964211359763_6.5836397472947_2.97556855477262 chr11 67577749 67578288 + 2.97556855477262 NA intron (NM_008088, intron 1 of 13) intron (NM_008088, intron 1 of 13) -8482 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_54_457_-0.357912769711028_8.66024740324143_2.9754374703096 chr9 63696816 63698582 + 2.9754374703096 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 60295 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_111_716_0.253960063688734_9.61280934054627_2.97511855099221 chr2 167947924 167951310 + 2.97511855099221 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 17290 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_155_1468_-0.194450608575707_10.4233933762684_2.97443996873635 chr7 126799510 126800460 + 2.97443996873635 NA promoter-TSS (NM_001177307) promoter-TSS (NM_001177307) 462 NM_001177308 11674 Mm.275831 NM_007438 ENSMUSG00000030695 Aldoa Aldo-1|Aldo1 aldolase A, fructose-bisphosphate protein-coding common_peak1_37_308_-0.444486513321128_8.04921977124381_2.97429455951224 chr17 15563701 15564400 + 2.97429455951224 NA promoter-TSS (NM_144809) promoter-TSS (NM_144809) -727 NM_144809 213389 Mm.215162 NM_144809 ENSMUSG00000051977 Prdm9 BC012016|Dsbc1|G1-419-29|Meisetz|PRDM9-B|Rcr1|repro7 PR domain containing 9 protein-coding common_peak1_240_1963_0.156272280939957_11.0177153547847_2.97359640218299 chr11 80382492 80384274 + 2.97359640218299 NA non-coding (NR_045038, exon 1 of 17) non-coding (NR_045038, exon 1 of 17) 104 NM_001130171 22680 Mm.401332 NM_011751 ENSMUSG00000017421 Zfp207 8430401D15Rik|BuGZ|Zep|Znf207 zinc finger protein 207 protein-coding common_peak2_68_586_-0.314621372863257_9.03990600667842_2.97355532432786 chr13 60737561 60738876 + 2.97355532432786 NA intron (NM_029653, intron 18 of 25) intron (NM_029653, intron 18 of 25) 48146 NM_199148 218275 Mm.222427 NM_199148 ENSMUSG00000042243 BC051665 - cDNA sequence BC051665 protein-coding common_peak1_68_586_-0.314621372863257_9.03990600667842_2.97355532432786 chr10 42678816 42679715 + 2.97355532432786 NA exon (NM_172416, exon 1 of 6) exon (NM_172416, exon 1 of 6) 349 NM_172416 14628 Mm.46636 NM_172416 ENSMUSG00000038280 Ostm1 1200002H13Rik|HSPC019|gl osteopetrosis associated transmembrane protein 1 protein-coding common_peak1_20_64_0.755106830770043_6.39992122841348_2.97339374239787-3 chr6 128822750 128823190 + 2.97339374239787 NA intron (NM_030599, intron 1 of 5) MER2|DNA|TcMar-Tigger 3345 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak1_20_64_0.755106830770043_6.39992122841348_2.97339374239787 chr13 107837360 107837961 + 2.97339374239787 NA intron (NM_145456, intron 2 of 14) intron (NM_145456, intron 2 of 14) 52404 NM_145456 67263 Mm.490418 NM_145456 ENSMUSG00000032846 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak1_20_64_0.755106830770043_6.39992122841348_2.97339374239787-2 chr15 76296088 76296496 + 2.97339374239787 NA TTS (NM_153122) TTS (NM_153122) 1858 NM_001195537 100503915 Mm.393455 NM_001195537 ENSMUSG00000071724 Smpd5 ENSMUSG00000071724|Gm10345|MA-nSMase sphingomyelin phosphodiesterase 5 protein-coding common_peak2_55_466_-0.35410167850538_8.69022790045697_2.97323833198947 chr15 55556741 55558163 + 2.97323833198947 NA promoter-TSS (NM_026759) promoter-TSS (NM_026759) 44 NM_001168250 105837 Mm.390829 NM_134092 ENSMUSG00000022369 Mtbp AI429604|MDM2BP Mdm2, transformed 3T3 cell double minute p53 binding protein protein-coding common_peak1_100_623_0.271445974743209_9.42112520623385_2.97200913139044 chr4 32131215 32132705 + 2.97200913139044 NA Intergenic Intergenic 167853 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_66_567_-0.319203419354958_8.9901454098272_2.97164992925177 chr2 118727851 118729017 + 2.97164992925177 NA promoter-TSS (NM_001290790) promoter-TSS (NM_001290790) 4 NM_177568 18796 Mm.215156 NM_177568 ENSMUSG00000040061 Plcb2 AI550384|B230205M18Rik|B230399N12 phospholipase C, beta 2 protein-coding unique_peak2_56_475_-0.35031904375777_8.71965824142906_2.97164244147884 chr6 144916451 144918703 + 2.97164244147884 NA Intergenic Intergenic 131235 NM_001024468 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding common_peak1_56_475_-0.35031904375777_8.71965824142906_2.97164244147884 chr7 100371314 100372017 + 2.97164244147884 NA promoter-TSS (NM_001017985) promoter-TSS (NM_001017985) 231 NM_028292 72590 Mm.177502 NM_028292 ENSMUSG00000030718 Ppme1 1110069N17Rik|2700017M01Rik|PME-1|Pme1 protein phosphatase methylesterase 1 protein-coding unique_peak2_16_137_-0.704988195803997_6.75603035887617_2.97065509116867-2 chr6 129668196 129669563 + 2.97065509116867 NA intron (NM_001288664, intron 5 of 5) intron (NM_001288664, intron 5 of 5) -8283 NM_001098669 16642 Mm.347927 NM_010653 ENSMUSG00000052736 Klrc2 NKG2C killer cell lectin-like receptor subfamily C, member 2 protein-coding unique_peak2_16_137_-0.704988195803997_6.75603035887617_2.97065509116867 chr11 22286387 22287111 + 2.97065509116867 NA promoter-TSS (NM_001252515) promoter-TSS (NM_001252515) 46 NM_153078 216565 Mm.491265 NM_153078 ENSMUSG00000042302 Ehbp1 AF424697|Flj21950|NACSIN EH domain binding protein 1 protein-coding unique_peak2_16_137_-0.704988195803997_6.75603035887617_2.97065509116867-3 chr6 136489054 136489873 + 2.97065509116867 NA Intergenic Intergenic -29388 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_16_137_-0.704988195803997_6.75603035887617_2.97065509116867 chr11 8424190 8424654 + 2.97065509116867 NA Intergenic Intergenic 240113 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_94_574_0.281051644443474_9.30794396805348_2.9706287074765 chr2 164832868 164834480 + 2.9706287074765 NA promoter-TSS (NM_001082974) promoter-TSS (NM_001082974) -78 NM_001082974 415115 Mm.474586 NM_001082974 ENSMUSG00000039873 Neurl2 Neur2|Ozz|Ozz-E3 neuralized E3 ubiquitin protein ligase 2 protein-coding common_peak1_43_360_-0.409444973006863_8.29113254038374_2.97043595435802 chr12 17544034 17544819 + 2.97043595435802 NA promoter-TSS (NM_013614) promoter-TSS (NM_013614) -447 NM_013614 18263 Mm.34102 NM_013614 ENSMUSG00000011179 Odc1 ODC ornithine decarboxylase, structural 1 protein-coding common_peak1_89_787_-0.269260870705388_9.48742138410368_2.9704191651571 chr18 80169009 80170162 + 2.9704191651571 NA Intergenic Intergenic -16654 NR_131039 105246506 Mm.392326 NR_131039 LOC105246506 - uncharacterized LOC105246506 ncRNA common_peak2_107_966_-0.241939890264534_9.79640213434458_2.9702363091688 chr1 171294113 171295351 + 2.9702363091688 NA exon (NM_025388, exon 2 of 7) exon (NM_025388, exon 2 of 7) 250 NM_025388 66155 Mm.2815 NM_025388 ENSMUSG00000062963 Ufc1 1110021H02Rik|AA062310|ESTM29 ubiquitin-fold modifier conjugating enzyme 1 protein-coding unique_peak2_33_274_-0.473139236251495_7.86671819028627_2.96992647834318 chr6 83786503 83788303 + 2.96992647834318 NA Intergenic RMER15|LTR|ERVL -7654 NM_019542 56174 Mm.190650 NM_019542 ENSMUSG00000034744 Nagk Gnk N-acetylglucosamine kinase protein-coding common_peak2_67_577_-0.318164799153795_9.01584328292378_2.96983322972189 chr1 65177825 65179688 + 2.96983322972189 NA intron (NM_001111320, intron 1 of 8) intron (NM_001111320, intron 1 of 8) 386 NM_010497 15926 Mm.9925 NM_010497 ENSMUSG00000025950 Idh1 AI314845|AI788952|E030024J03Rik|Id-1|Idh-1|Idpc isocitrate dehydrogenase 1 (NADP+), soluble protein-coding common_peak1_132_901_0.226916689406981_9.93044196795887_2.96961998637264 chr18 78140705 78142434 + 2.96961998637264 NA intron (NM_001171011, intron 1 of 8) intron (NM_001171011, intron 1 of 8) 550 NM_001171011 108052 Mm.33832 NM_028122 ENSMUSG00000059336 Slc14a1 2610507K20Rik|3021401A05Rik|UT-B|Utb1 solute carrier family 14 (urea transporter), member 1 protein-coding common_peak2_209_1642_0.170075776913102_10.7671546534066_2.96788825201199 chr2 25270989 25273526 + 2.96788825201199 NA promoter-TSS (NM_175300) promoter-TSS (NM_175300) 161 NM_023464 68475 Mm.21444 NM_023464 ENSMUSG00000026966 Ssna1 1110003H09Rik|1190004J23Rik|AA934184|N14|NA14 SS nuclear autoantigen 1 protein-coding unique_peak2_12_106_-0.81265805294657_6.33513795992786_2.96693024362481-4 chrX 103622895 103624012 + 2.96693024362481 NA intron (NR_028380, intron 1 of 10) intron (NR_028380, intron 1 of 10) 301 NR_028381 78878 Mm.259724 NR_028380 ENSMUSG00000086370 Ftx B230206F22Rik|BB219131|NCRNA00182|Thcytx Ftx transcript, Xist regulator (non-protein coding) ncRNA unique_peak2_12_106_-0.81265805294657_6.33513795992786_2.96693024362481-3 chr6 55015219 55016346 + 2.96693024362481 NA Intergenic L1MB1|LINE|L1 -22219 NM_180678 353172 Mm.250004 NM_180678 ENSMUSG00000029777 Gars GENA202|Gena201|Nmf249|Sgrp23 glycyl-tRNA synthetase protein-coding unique_peak2_12_106_-0.81265805294657_6.33513795992786_2.96693024362481 chr14 77886681 77887640 + 2.96693024362481 NA Intergenic MLT1C|LTR|ERVL-MaLR -12243 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding unique_peak2_12_106_-0.81265805294657_6.33513795992786_2.96693024362481-2 chr17 35189056 35190090 + 2.96693024362481 NA Intergenic PB1D10|SINE|Alu -1133 NM_010734 16988 Mm.19379 NM_010734 ENSMUSG00000073412 Lst1 B144 leukocyte specific transcript 1 protein-coding common_peak2_116_1057_-0.230045946352881_9.93210093893759_2.9668898344949 chr11 102880267 102881752 + 2.9668898344949 NA promoter-TSS (NM_011431) promoter-TSS (NM_011431) -34 NM_001109995 20624 Mm.873 NM_011431 ENSMUSG00000020929 Eftud2 116kDa|Snrp116|U5-116kD elongation factor Tu GTP binding domain containing 2 protein-coding unique_peak2_3_39_-1.47889945413491_4.58247836781991_2.96631085054194 chr19 40561519 40561762 + 2.96631085054194 NA intron (NM_153554, intron 14 of 18) (CGG)n|Simple_repeat|Simple_repeat 26823 NM_019698 56454 Mm.233117 NM_019698 ENSMUSG00000025007 Aldh18a1 2810433K04Rik|AI429789|Pycs aldehyde dehydrogenase 18 family, member A1 protein-coding common_peak2_64_549_-0.326373288079125_8.94010116437246_2.96594594849235 chr3 65921652 65923908 + 2.96594594849235 NA Intergenic Intergenic 35445 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_38_316_-0.435395580531547_8.09064123987363_2.96567713040879-4 chr9 106247360 106248203 + 2.96567713040879 NA promoter-TSS (NM_001291835) promoter-TSS (NM_001291835) -51 NM_001291835 11655 Mm.290578 NM_020559 ENSMUSG00000032786 Alas1 ALAS|ALAS-N|Alas-1|Alas-h aminolevulinic acid synthase 1 protein-coding common_peak1_38_316_-0.435395580531547_8.09064123987363_2.96567713040879 chr7 142392356 142393197 + 2.96567713040879 NA Intergenic Intergenic -4906 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak1_38_316_-0.435395580531547_8.09064123987363_2.96567713040879-2 chr8 22814246 22815031 + 2.96567713040879 NA Intergenic B1F2|SINE|Alu -8984 NM_001122820 64933 Mm.390023 NM_029505 ENSMUSG00000031539 Ap3m2 5830445E16Rik|AP-3B adaptor-related protein complex 3, mu 2 subunit protein-coding common_peak1_38_316_-0.435395580531547_8.09064123987363_2.96567713040879-3 chr8 105269398 105270348 + 2.96567713040879 NA promoter-TSS (NR_045689) promoter-TSS (NR_045689) 72 NM_001256044 26386 Mm.89204 NM_011939 ENSMUSG00000033249 Hsf4 HSF 4|HSTF 4|HSTF4|ldis1|mHSF4 heat shock transcription factor 4 protein-coding common_peak2_110_708_0.254276350125179_9.59677999230211_2.96564035441371 chr2 18676005 18677961 + 2.96564035441371 NA promoter-TSS (NM_007552) promoter-TSS (NM_007552) -35 NM_007552 12151 Mm.289584 NM_007552 ENSMUSG00000026739 Bmi1 AW546694|Bmi-1|Pcgf4 Bmi1 polycomb ring finger oncogene protein-coding common_peak2_110_708_0.254276350125179_9.59677999230211_2.96564035441371-2 chr7 97081647 97083300 + 2.96564035441371 NA intron (NM_001162477, intron 1 of 9) intron (NM_001162477, intron 1 of 9) 722 NM_010248 14389 Mm.42033 NM_010248 ENSMUSG00000004508 Gab2 AI463667|D130058I17Rik|p97 growth factor receptor bound protein 2-associated protein 2 protein-coding common_peak1_88_777_-0.270607976222005_9.46832235687519_2.96560530599441 chr9 66126009 66127248 + 2.96560530599441 NA promoter-TSS (NM_026635) promoter-TSS (NM_026635) 17 NM_026635 68250 Mm.27107 NM_026635 ENSMUSG00000032381 Fam96a 5730536A07Rik family with sequence similarity 96, member A protein-coding common_peak1_60_512_-0.338295564560081_8.83366723332701_2.964774324424 chr16 93603586 93604593 + 2.964774324424 NA promoter-TSS (NM_145482) promoter-TSS (NM_145482) -274 NM_145482 224440 Mm.10628 NM_145482 ENSMUSG00000022948 Setd4 AY037804|C21orf18|ORF21 SET domain containing 4 protein-coding unique_peak2_24_200_-0.565036499042544_7.36853344165766_2.96440200691988-2 chr16 91545981 91547639 + 2.96440200691988 NA promoter-TSS (NM_008338) promoter-TSS (NM_008338) -284 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding common_peak1_24_200_-0.565036499042544_7.36853344165766_2.96440200691988 chr5 105239664 105240174 + 2.96440200691988 NA promoter-TSS (NM_001039646) promoter-TSS (NM_001039646) -386 NM_001039646 626578 Mm.275893 NM_001039646 ENSMUSG00000105096 Gbp10 - guanylate-binding protein 10 protein-coding common_peak1_24_200_-0.565036499042544_7.36853344165766_2.96440200691988-2 chrX 12673625 12674191 + 2.96440200691988 NA promoter-TSS (NM_175141) promoter-TSS (NM_175141) -269 NM_175141 69155 Mm.15974 NM_175141 ENSMUSG00000044148 1810030O07Rik - RIKEN cDNA 1810030O07 gene protein-coding unique_peak2_24_200_-0.565036499042544_7.36853344165766_2.96440200691988 chr12 76328526 76329815 + 2.96440200691988 NA exon (NM_001101471, exon 2 of 2) exon (NM_001101471, exon 2 of 2) 4279 NM_001101471 238276 Mm.311452 NM_001101471 ENSMUSG00000021057 Akap5 3526401B18Rik|AKAP 150|AKAP-5|AKAP150|BB098886|Gm258|P150 A kinase (PRKA) anchor protein 5 protein-coding common_peak1_59_503_-0.342011179715856_8.80627433364199_2.96417858523478 chr12 70218697 70219895 + 2.96417858523478 NA intron (NM_133198, intron 3 of 19) intron (NM_133198, intron 3 of 19) 8387 NM_133198 110095 Mm.256926 NM_133198 ENSMUSG00000021069 Pygl - liver glycogen phosphorylase protein-coding common_peak1_46_216_0.441579854981538_7.98234115993525_2.96378277327937 chr3 107233789 107234689 + 2.96378277327937 NA TTS (NM_001256174) TTS (NM_001256174) 3625 NM_001256174 319929 Mm.30453 NM_001256174 ENSMUSG00000094613 A630076J17Rik - RIKEN cDNA A630076J17 gene protein-coding common_peak1_79_690_-0.28818305038477_9.28845037519587_2.9636901230139 chr2 32570575 32571587 + 2.9636901230139 NA intron (NM_010073, intron 1 of 3) intron (NM_010073, intron 1 of 3) 223 NM_010073 13481 Mm.22001 NM_010073 ENSMUSG00000026810 Dpm2 AW557993|R75484 dolichol-phosphate (beta-D) mannosyltransferase 2 protein-coding common_peak2_76_431_0.321834038609598_8.91580452146827_2.96361728839505 chr11 104468502 104470065 + 2.96361728839505 NA Intergenic CpG -26992 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak1_150_1413_-0.197046019823848_10.3670433948975_2.96203041008739 chr7 28795442 28797347 + 2.96203041008739 NA intron (NM_177158, intron 8 of 11) intron (NM_177158, intron 8 of 11) 7425 NM_177158 320435 Mm.74632 NM_177158 ENSMUSG00000051735 Rinl 5830482F20Rik|9930116N10Rik Ras and Rab interactor-like protein-coding common_peak1_127_856_0.232938802571736_9.85962079539837_2.96158265709742 chr17 36120530 36121546 + 2.96158265709742 NA intron (NM_010395, intron 2 of 11) intron (NM_010395, intron 2 of 11) 397 NM_010395 15024 Mm.426031 NM_010395 ENSMUSG00000079491 H2-T10 H-2T10 histocompatibility 2, T region locus 10 protein-coding common_peak2_227_2275_-0.154561500383695_11.0750040921147_2.9613360251872 chr9 100544592 100547074 + 2.9613360251872 NA intron (NM_010878, intron 1 of 3) CpG 220 NM_010878 17973 Mm.181485 NM_010878 ENSMUSG00000032475 Nck1 6330586M15Rik|D230010O13Rik|Nck|Nck-1 non-catalytic region of tyrosine kinase adaptor protein 1 protein-coding common_peak1_227_2275_-0.154561500383695_11.0750040921147_2.9613360251872 chr12 4592316 4594035 + 2.9613360251872 NA 5' UTR (NM_001198968, exon 1 of 40) 5' UTR (NM_001198968, exon 1 of 40) 167 NM_001198968 20403 Mm.341204 NM_011365 ENSMUSG00000020640 Itsn2 AI327390|Ese2|Sh3d1B|Sh3p18|mKIAA1256 intersectin 2 protein-coding common_peak2_123_821_0.236912243425335_9.80145070539435_2.96126873743375 chr2 22894817 22896532 + 2.96126873743375 NA exon (NM_019501, exon 1 of 11) exon (NM_019501, exon 1 of 11) 152 NM_019501 56075 Mm.249752 NM_019501 ENSMUSG00000026784 Pdss1 2610203G20Rik|2700031G06Rik|TPT|TPT 1|Tprt|mDLP1|mSPS1 prenyl (solanesyl) diphosphate synthase, subunit 1 protein-coding common_peak1_78_680_-0.289411896898756_9.26680503956269_2.96122054279437 chrX 105928550 105929601 + 2.96122054279437 NA intron (NM_009530, intron 1 of 34) CpG 297 NM_009530 22589 Mm.10141 NM_009530 ENSMUSG00000031229 Atrx 4833408C14Rik|AI447451|ATR2|DXHXS6677E|HP1-BP38|Hp1bp2|Hp1bp38|MRXS3|RAD54L|Rad54|XH2|Xnp|ZNF-HX alpha thalassemia/mental retardation syndrome X-linked protein-coding common_peak2_78_680_-0.289411896898756_9.26680503956269_2.96122054279437 chr4 107367407 107368495 + 2.96122054279437 NA 5' UTR (NM_028355, exon 1 of 18) 5' UTR (NM_028355, exon 1 of 18) 167 NM_028355 72787 Mm.28478 NM_028355 ENSMUSG00000028614 Ndc1 2810475A17Rik|AI450313|Tmem48|sks NDC1 transmembrane nucleoporin protein-coding common_peak1_299_3134_-0.130875397027021_11.5488120291759_2.96118384170741 chr10 68238512 68241779 + 2.96118384170741 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 38581 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak2_18_152_-0.657023639295762_6.92887602304477_2.96094508058817-3 chr7 3594891 3595823 + 2.96094508058817 NA Intergenic RLTR17|LTR|ERVK 20800 NM_175632 232790 Mm.358882 NM_175632 ENSMUSG00000054594 Oscar mOSCAR|mOSCAR-M1|mOSCAR-M2|mOSCAR-M3 osteoclast associated receptor protein-coding unique_peak2_18_152_-0.657023639295762_6.92887602304477_2.96094508058817 chr15 97663749 97664479 + 2.96094508058817 NA Intergenic ORR1E|LTR|ERVL-MaLR 41708 NM_028003 71919 Mm.12255 NM_028003 ENSMUSG00000022466 Rpap3 2310042P20Rik|D15Ertd682e RNA polymerase II associated protein 3 protein-coding unique_peak2_18_152_-0.657023639295762_6.92887602304477_2.96094508058817-2 chr4 41941173 41942258 + 2.96094508058817 NA promoter-TSS (NM_001177580).2 promoter-TSS (NM_001177580).2 81 NM_001270431 100041579 Mm.389537 NM_001270431 ENSMUSG00000078747 Gm20878 - predicted gene, 20878 protein-coding common_peak1_18_152_-0.657023639295762_6.92887602304477_2.96094508058817 chr12 24650709 24651186 + 2.96094508058817 NA promoter-TSS (NM_178357) promoter-TSS (NM_178357) -424 NM_178357 194655 Mm.9616 NM_178357 ENSMUSG00000020653 Klf11 9830142A17|D12Ertd427e|Tieg2|Tieg2b|Tieg3 Kruppel-like factor 11 protein-coding common_peak1_18_152_-0.657023639295762_6.92887602304477_2.96094508058817-2 chr9 21327502 21328021 + 2.96094508058817 NA intron (NM_001199186, intron 1 of 21) B3|SINE|B2 7042 NM_001199186 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding common_peak2_132_1223_-0.213487530030291_10.1506440776775_2.96072760004826 chr3 89213300 89215548 + 2.96072760004826 NA promoter-TSS (NM_013691) promoter-TSS (NM_013691) -89 NM_013604 17827 Mm.280943 NM_013604 ENSMUSG00000064068 Mtx1 Gcap6|Mtx metaxin 1 protein-coding common_peak1_15_41_0.903935840346407_5.84428534295196_2.95955828708081 chr11 117831032 117831498 + 2.95955828708081 NA intron (NM_027827, intron 2 of 10) RSINE1|SINE|B4 -5251 NM_009387 21877 Mm.2661 NM_009387 ENSMUSG00000025574 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 protein-coding common_peak1_15_41_0.903935840346407_5.84428534295196_2.95955828708081-2 chr9 53603123 53603461 + 2.95955828708081 NA intron (NM_144784, intron 1 of 11) intron (NM_144784, intron 1 of 11) 7058 NM_144784 110446 Mm.293233 NM_144784 ENSMUSG00000032047 Acat1 6330585C21Rik|Acat acetyl-Coenzyme A acetyltransferase 1 protein-coding unique_peak1_15_41_0.903935840346407_5.84428534295196_2.95955828708081 chr8 120505052 120505451 + 2.95955828708081 NA intron (NM_198671, intron 1 of 15) CpG 16385 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_371_3432_0.118787201303046_11.8046477426088_2.9589902861369 chr10 96179838 96183017 + 2.9589902861369 NA Intergenic Intergenic -44780 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_35_146_0.531625328222659_7.46548500894769_2.95836436628529 chr9 41075986 41077103 + 2.95836436628529 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) -71916 NM_019465 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak1_45_377_-0.397169308941207_8.36365776975047_2.95813580642388 chr17 32947545 32948392 + 2.95813580642388 NA promoter-TSS (NM_130882) promoter-TSS (NM_130882) -607 NM_130882 170716 Mm.254838 NM_130882 ENSMUSG00000024055 Cyp4f13 0610030I10Rik|Cypf13 cytochrome P450, family 4, subfamily f, polypeptide 13 protein-coding common_peak2_139_1296_-0.206292427355454_10.237816550574_2.95784964460301 chr8 94353258 94355556 + 2.95784964460301 NA intron (NM_001205311, intron 21 of 24) intron (NM_001205311, intron 21 of 24) 25199 NM_001205311 20497 Mm.25804 NM_019415 ENSMUSG00000031766 Slc12a3 AI035291|NCC|NCCT|TSC solute carrier family 12, member 3 protein-coding common_peak1_479_4749_0.101393879237456_12.2644087377244_2.95739347658048 chr13 98924785 98927331 + 2.95739347658048 NA intron (NM_178716, intron 1 of 23) CpG 326 NM_178716 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak1_298_2593_0.136502954916644_11.40921424171_2.95709252619783 chr8 105635649 105638021 + 2.95709252619783 NA intron (NM_181322, intron 1 of 11) CpG 297 NM_181322 13018 Mm.269474 NM_181322 ENSMUSG00000005698 Ctcf AW108038 CCCTC-binding factor protein-coding common_peak2_92_558_0.2841122480444_9.26876059686539_2.95691224316996 chr11 95366288 95368268 + 2.95691224316996 NA intron (NM_172543, intron 2 of 7) intron (NM_172543, intron 2 of 7) -17644 NM_016752 110172 Mm.4593 NM_016752 ENSMUSG00000020873 Slc35b1 Ugalt2 solute carrier family 35, member B1 protein-coding common_peak1_86_757_-0.27325620750524_9.42942593441847_2.95652414992585 chr13 96670154 96670902 + 2.95652414992585 NA intron (NM_008255, intron 1 of 19) CpG 408 NM_008255 15357 Mm.316652 NM_008255 ENSMUSG00000021670 Hmgcr HMG-CoAR|Red 3-hydroxy-3-methylglutaryl-Coenzyme A reductase protein-coding common_peak1_40_177_0.485709834099028_7.71858834801591_2.95622450363972 chr6 39781278 39782146 + 2.95622450363972 NA Intergenic Intergenic 29224 NM_010270 14548 Mm.377071 NM_010270 ENSMUSG00000029918 Mrps33 AI841153|CGI-139|Gdap3|MRP-S33|PTD003 mitochondrial ribosomal protein S33 protein-coding common_peak1_30_249_-0.499102079927781_7.7162332446982_2.95622450363972 chr19 46984639 46985238 + 2.95622450363972 NA intron (NM_001164363, intron 1 of 17) intron (NM_001164363, intron 1 of 17) -15371 NM_001164365 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak1_34_282_-0.463212528308349_7.91305197867771_2.95582383498543 chr4 86611429 86612152 + 2.95582383498543 NA exon (NM_173400, exon 1 of 17) exon (NM_173400, exon 1 of 17) 232 NM_173400 230376 Mm.74730 NM_173400 ENSMUSG00000038047 Haus6 6230416J20Rik|9830144E06|D4Ertd27e|mKIAA1574 HAUS augmin-like complex, subunit 6 protein-coding common_peak1_34_282_-0.463212528308349_7.91305197867771_2.95582383498543-2 chr4 133729806 133730525 + 2.95582383498543 NA intron (NM_001080819, intron 1 of 19) intron (NM_001080819, intron 1 of 19) -13057 NR_106086 102465707 NR_106086 ENSMUSG00000104566 Mir7227 mmu-mir-7227 microRNA 7227 ncRNA common_peak2_313_2762_0.132068098779515_11.4980538962023_2.9555860336432 chr10 18021215 18023880 + 2.9555860336432 NA intron (NM_028440, intron 1 of 2) intron (NM_028440, intron 1 of 2) 705 NM_028440 73112 Mm.276041 NM_028440 ENSMUSG00000078453 Abracl 1700028I04Rik|3110003A17Rik ABRA C-terminal like protein-coding common_peak2_180_1353_0.186195291901365_10.4961096695257_2.95488599883674 chr1 170173968 170176263 + 2.95488599883674 NA promoter-TSS (NM_133806) promoter-TSS (NM_133806) -151 NM_001305045 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding common_peak1_119_1088_-0.226907183746491_9.97533464684366_2.95475444169543 chr13 97438335 97440155 + 2.95475444169543 NA intron (NR_110432, intron 1 of 1) intron (NR_110432, intron 1 of 1) 4275 NR_110432 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 ENSMUSG00000078952|Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA common_peak1_99_885_-0.251923074045923_9.66520135153206_2.95450520743676 chr3 84813702 84814446 + 2.95450520743676 NA Intergenic CpG -1503 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak2_48_229_0.43138618596631_8.06118314392753_2.95430376735651 chr18 75446589 75447840 + 2.95430376735651 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -67431 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA common_peak2_127_1170_-0.21743516381698_10.0848077785927_2.95366562419165 chr4 43043836 43047554 + 2.95366562419165 NA intron (NR_045567, intron 1 of 7) intron (NR_045567, intron 1 of 7) 525 NR_045567 230088 Mm.260162 NM_172691 ENSMUSG00000036002 Fam214b B230312A22Rik family with sequence similarity 214, member B protein-coding common_peak2_149_1402_-0.197537274143874_10.355530656548_2.95360785646311 chr13 98801575 98805986 + 2.95360785646311 NA intron (NM_172591, intron 2 of 25) intron (NM_172591, intron 2 of 25) 11669 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak2_130_883_0.229184702455441_9.90249491061915_2.9527230204129 chr7 109985407 109987297 + 2.9527230204129 NA promoter-TSS (NM_153525) promoter-TSS (NM_153525) -122 NM_153525 233724 Mm.43212 NM_153525 ENSMUSG00000047554 Tmem41b 1500015G02Rik|1500031M19Rik|AU018901|D7Ertd70e|D7Ertd743e transmembrane protein 41B protein-coding common_peak2_76_661_-0.293965866034151_9.22370447379014_2.95269792162596 chr13 119487709 119489326 + 2.95269792162596 NA promoter-TSS (NR_027974) promoter-TSS (NR_027974) -133 NR_027974 67304 Mm.474382 NM_026084 ENSMUSG00000074635 3110070M22Rik - RIKEN cDNA 3110070M22 gene ncRNA common_peak2_248_2520_-0.146140017536908_11.2267103940901_2.95263659024085 chr17 35997116 36003257 + 2.95263659024085 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) 5682 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA common_peak1_22_184_-0.592920656422802_7.23492113230491_2.95056553381069 chr4 133633595 133634018 + 2.95056553381069 NA promoter-TSS (NM_001017968) promoter-TSS (NM_001017968) -377 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak1_22_184_-0.592920656422802_7.23492113230491_2.95056553381069-2 chr7 66060507 66061024 + 2.95056553381069 NA intron (NM_021336, intron 1 of 8) CpG 429 NM_021336 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding common_peak2_158_1141_0.202529346233554_10.2586116084796_2.95047572913001 chr1 92472961 92474688 + 2.95047572913001 NA promoter-TSS (NM_024197) promoter-TSS (NM_024197) -66 NM_024197 67273 Mm.248778 NM_024197 ENSMUSG00000026260 Ndufa10 2900053E13Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 protein-coding common_peak2_445_4326_0.105944779718868_12.1321237952813_2.95006209908937 chr13 49305535 49310096 + 2.95006209908937 NA intron (NM_015759, intron 1 of 17) intron (NM_015759, intron 1 of 17) 1393 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak1_141_983_0.217257351694133_10.0511431811863_2.94985975765038 chrX 94234115 94235603 + 2.94985975765038 NA promoter-TSS (NM_001039059) promoter-TSS (NM_001039059) -71 NM_001039059 236904 Mm.115533 NM_153165 ENSMUSG00000043929 Klhl15 6330500C13Rik kelch-like 15 protein-coding common_peak2_46_386_-0.393058668718393_8.39966042178521_2.94946814708418 chr14 16255198 16257063 + 2.94946814708418 NA intron (NM_021504, intron 2 of 11) intron (NM_021504, intron 2 of 11) -6322 NM_027695 71147 Mm.197960 NM_027695 ENSMUSG00000021786 Oxsm 4933425A18Rik|C80494 3-oxoacyl-ACP synthase, mitochondrial protein-coding common_peak1_39_325_-0.430981615413945_8.1332373465241_2.94885403026179-2 chr9 49055500 49056050 + 2.94885403026179 NA exon (NM_012039, exon 1 of 16) exon (NM_012039, exon 1 of 16) 194 NM_012039 26951 Mm.24791 NM_012039 ENSMUSG00000032264 Zw10 6330566F14Rik|MmZw10 zw10 kinetochore protein protein-coding common_peak1_39_325_-0.430981615413945_8.1332373465241_2.94885403026179 chr11 97107168 97107907 + 2.94885403026179 NA intron (NM_019507, intron 1 of 5) B3|SINE|B2 7794 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding common_peak1_20_168_-0.623404792483687_7.08917704004034_2.94807022237528-2 chr2 173409846 173410286 + 2.94807022237528 NA Intergenic IMPB_01|Satellite|Satellite -112526 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding common_peak1_20_168_-0.623404792483687_7.08917704004034_2.94807022237528 chr10 19066083 19066502 + 2.94807022237528 NA Intergenic Intergenic -50882 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_83_486_0.302921304088869_9.07923861412678_2.9479053957302 chr11 11557266 11558599 + 2.9479053957302 NA Intergenic Intergenic 68666 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak1_196_1511_0.176864192404228_10.6506745204232_2.94649997911579 chr13 19395142 19396440 + 2.94649997911579 NA promoter-TSS (NM_024270) promoter-TSS (NM_024270) 22 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak2_72_401_0.3312673352067_8.81668535878228_2.94648164102017 chr2 174109695 174111248 + 2.94648164102017 NA exon (NM_213733, exon 1 of 12) exon (NM_213733, exon 1 of 12) 120 NM_213733 228961 Mm.295629 NM_213733 ENSMUSG00000039263 Npepl1 BC023239|C85514|mKIAA1974 aminopeptidase-like 1 protein-coding common_peak2_259_2650_-0.142181812161651_11.3012300487864_2.94568419490702 chr2 162930250 162932712 + 2.94568419490702 NA promoter-TSS (NM_026499) promoter-TSS (NM_026499) -27 NM_026499 67996 Mm.24042 NM_026499 ENSMUSG00000016921 Srsf6 1210001E11Rik|AI314910|AW146126|Sfrs6 serine/arginine-rich splicing factor 6 protein-coding common_peak1_74_642_-0.298525219038281_9.17941231780881_2.9451431952168 chr14 67841042 67841995 + 2.9451431952168 NA intron (NM_177780, intron 7 of 51) B4A|SINE|B4 18227 NR_105857 102465310 NR_105857 ENSMUSG00000098866 Mir6539 Gm27464|mir-6539|mmu-mir-6539 microRNA 6539 ncRNA common_peak2_483_4800_0.100672246349564_12.2794553438334_2.94505548800733 chr1 40495891 40505289 + 2.94505548800733 NA 3' UTR (NM_008365, exon 11 of 11) 3' UTR (NM_008365, exon 11 of 11) -14772 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_112_725_0.25169376017665_9.62967261808408_2.94474870893792 chr11 60830180 60831715 + 2.94474870893792 NA intron (NM_001172112, intron 1 of 6) intron (NM_001172112, intron 1 of 6) 316 NM_145428 216820 Mm.21475 NM_145428 ENSMUSG00000042569 Dhrs7b BC003479|C79874|C80074|PexRAP dehydrogenase/reductase (SDR family) member 7B protein-coding common_peak2_113_1026_-0.233109435581664_9.88766574852736_2.94436422528874 chr12 72843402 72845398 + 2.94436422528874 NA Intergenic Intergenic 73365 NM_029444 75801 Mm.242892 NM_029444 ENSMUSG00000021098 4930447C04Rik 4921504I02Rik|A930035O15Rik|Six6OS|Six6as|Six6os1 RIKEN cDNA 4930447C04 gene protein-coding common_peak2_84_738_-0.277788706293659_9.39053620099932_2.9442838480255 chr3 19162169 19163782 + 2.9442838480255 NA promoter-TSS (NM_028840) promoter-TSS (NM_028840) 90 NM_028840 74252 Mm.200383 NM_028840 ENSMUSG00000027599 Armc1 2310016N05Rik|2900046P06Rik|3110009G21Rik|AA409258|AW048872|Arcp|C330014L16Rik armadillo repeat containing 1 protein-coding common_peak2_84_738_-0.277788706293659_9.39053620099932_2.9442838480255-2 chr3 122273589 122275420 + 2.9442838480255 NA promoter-TSS (NM_153806) promoter-TSS (NM_153806) 90 NM_153806 99480 Mm.398647 NM_153806 ENSMUSG00000039756 Dnttip2 4930588M11Rik|AA408582|AU014960|HSU15552 deoxynucleotidyltransferase, terminal, interacting protein 2 protein-coding common_peak1_84_738_-0.277788706293659_9.39053620099932_2.9442838480255 chr13 101696099 101697394 + 2.9442838480255 NA intron (NM_001077495, intron 7 of 15) intron (NM_001077495, intron 7 of 15) -4116 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_249_2059_0.152304468130481_11.0845808561358_2.94418828001864 chr4 134105755 134109485 + 2.94418828001864 NA intron (NM_026257, intron 1 of 14) intron (NM_026257, intron 1 of 14) 5037 NM_026257 67586 Mm.282029 NM_026257 ENSMUSG00000012126 Ubxn11 4930506L07Rik|D4Bwg1540e|Soc|Soci|Ubxd5 UBX domain protein 11 protein-coding unique_peak2_9_83_-0.927795506334341_5.92841966961159_2.9441663161895 chr9 107587016 107587561 + 2.9441663161895 NA promoter-TSS (NM_025903) promoter-TSS (NM_025903) -430 NM_025903 15983 Mm.215335 NM_025903 ENSMUSG00000010048 Ifrd2 1810034A24Rik|AA470234|AI838527|SKMc15 interferon-related developmental regulator 2 protein-coding common_peak1_73_632_-0.299665727030575_9.15622882591305_2.94406985907418 chr7 127278909 127279956 + 2.94406985907418 NA Intergenic Intergenic -5373 NM_009266 20768 Mm.20294 NM_009266 ENSMUSG00000049091 Sephs2 Sps2|Ysg3 selenophosphate synthetase 2 protein-coding common_peak1_28_106_0.607196328111422_7.04506515045686_2.94373674453797 chr5 32863678 32864162 + 2.94373674453797 NA intron (NM_177786, intron 1 of 32) CpG 199 NM_001025426 277854 Mm.101524 NM_177786 ENSMUSG00000037426 Depdc5 AV016528 DEP domain containing 5 protein-coding common_peak1_28_106_0.607196328111422_7.04506515045686_2.94373674453797-2 chr9 106214947 106215475 + 2.94373674453797 NA 3' UTR (NM_011876, exon 9 of 9) 3' UTR (NM_011876, exon 9 of 9) -7387 NM_031178 81897 Mm.44889 NM_031178 ENSMUSG00000045322 Tlr9 - toll-like receptor 9 protein-coding common_peak2_28_106_0.607196328111422_7.04506515045686_2.94373674453797 chr12 102311002 102312077 + 2.94373674453797 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 27898 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak2_35_290_-0.45357766984926_7.95808650798365_2.94344371977546 chr4 137352877 137354944 + 2.94344371977546 NA intron (NM_001243769, intron 1 of 5) ID_B1|SINE|B4 3849 NM_009861 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak1_102_641_0.265118396654437_9.45898868544952_2.94209195760566 chr16 38562832 38563603 + 2.94209195760566 NA intron (NM_026407, intron 1 of 8) intron (NM_026407, intron 1 of 8) 403 NM_026407 67846 Mm.310476 NM_026407 ENSMUSG00000002845 Tmem39a 2610033C09Rik transmembrane protein 39a protein-coding common_peak2_468_4612_0.102590232349536_12.2227846932404_2.94143248136015 chr6 38549701 38553530 + 2.94143248136015 NA 5' UTR (NM_138680, exon 1 of 10) 5' UTR (NM_138680, exon 1 of 10) 171 NM_001170848 192196 Mm.276133 NM_138680 ENSMUSG00000029823 Luc7l2 4930471C18Rik|AA522013|AU015269|CGI59|Cgi74 LUC7-like 2 (S. cerevisiae) protein-coding common_peak1_167_1597_-0.18474011557041_10.5496816351428_2.94075633564812 chr17 33555133 33556905 + 2.94075633564812 NA intron (NM_053214, intron 1 of 27) intron (NM_053214, intron 1 of 27) 312 NM_053214 17916 Mm.42019 NM_053214 ENSMUSG00000024300 Myo1f C330006B10Rik myosin IF protein-coding common_peak2_69_378_0.342003987538797_8.73705603194049_2.94036757992372 chr3 88324624 88325780 + 2.94036757992372 NA intron (NM_020003, intron 1 of 5) intron (NM_020003, intron 1 of 5) 179 NM_020003 56700 Mm.439922 NM_020003 ENSMUSG00000001418 Glmp 0610031J06Rik|AB027141|NCU-G1 glycosylated lysosomal membrane protein protein-coding common_peak2_251_2081_0.151079429025076_11.099294067812_2.93989630188943 chr15 89308580 89312581 + 2.93989630188943 NA intron (NM_001081030, intron 1 of 39) intron (NM_001081030, intron 1 of 39) 4731 NM_001081030 77980 Mm.35483 NM_030019 ENSMUSG00000036529 Sbf1 2610510A08Rik|B230113C15Rik|Mtmr5|mKIAA3020 SET binding factor 1 protein-coding common_peak2_50_243_0.41693343956457_8.13920405734517_2.9394800562118 chr2 27677300 27678166 + 2.9394800562118 NA intron (NM_011305, intron 1 of 9) CpG 532 NM_011305 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_81_470_0.308472326638999_9.03381941293228_2.9393012258111 chr1 134454888 134455969 + 2.9393012258111 NA promoter-TSS (NM_001311136) promoter-TSS (NM_001311136) -103 NM_153128 240756 Mm.87398 NM_153128 ENSMUSG00000026455 Klhl12 C3ip1 kelch-like 12 protein-coding common_peak2_81_470_0.308472326638999_9.03381941293228_2.9393012258111 chr4 155868690 155870233 + 2.9393012258111 NA promoter-TSS (NM_028020) promoter-TSS (NM_028020) -21 NM_024472 79554 Mm.25556 NM_024472 ENSMUSG00000029073 Cptp Gltpd1 ceramide-1-phosphate transfer protein protein-coding common_peak2_52_256_0.410117216249233_8.2106831573185_2.93793607910263 chr6 83316796 83317824 + 2.93793607910263 NA intron (NM_008638, intron 1 of 7) CpG 294 NM_008638 17768 Mm.443 NM_008638 ENSMUSG00000005667 Mthfd2 AW558851|NMDMC methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase protein-coding common_peak1_89_534_0.289395867462478_9.20809301501975_2.93761201532635 chr2 128424502 128426029 + 2.93761201532635 NA intron (NR_028591, intron 1 of 1) ORR1A2|LTR|ERVL-MaLR 4086 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_150_1066_0.209175924161126_10.163932422905_2.93754872175098 chr6 57702250 57704114 + 2.93754872175098 NA exon (NM_133737, exon 1 of 9) exon (NM_133737, exon 1 of 9) 727 NM_133737 71835 Mm.274904 NM_133737 ENSMUSG00000062190 Lancl2 1700003F10Rik LanC (bacterial lantibiotic synthetase component C)-like 2 protein-coding common_peak1_101_632_0.268221398885471_9.44017238887108_2.93741896228216 chr12 17347589 17348960 + 2.93741896228216 NA promoter-TSS (NM_001008421) promoter-TSS (NM_001008421) -219 NM_001008421 217431 Mm.27536 NM_001008421 ENSMUSG00000061458 Nol10 Gm67 nucleolar protein 10 protein-coding common_peak2_41_184_0.472705494468543_7.76773420775058_2.93713225806042 chr17 5194956 5196322 + 2.93713225806042 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 200565 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_49_412_-0.377370468096705_8.50131273737109_2.93671610313854 chr11 40733523 40734361 + 2.93671610313854 NA promoter-TSS (NM_013552) promoter-TSS (NM_013552) 281 NM_001290697 52653 Mm.276504 NM_026023 ENSMUSG00000020328 Nudcd2 - NudC domain containing 2 protein-coding common_peak2_49_412_-0.377370468096705_8.50131273737109_2.93671610313854 chr15 90223558 90225136 + 2.93671610313854 NA promoter-TSS (NR_106106) promoter-TSS (NR_106106) -13 NR_106106 102466838 NR_106106 ENSMUSG00000099319 Mir7648 Gm27736|mmu-mir-7648 microRNA 7648 ncRNA unique_peak2_15_129_-0.726114549903286_6.65931053807681_2.93670826206567 chr1 69684920 69685944 + 2.93670826206567 NA intron (NM_011770, intron 1 of 7) intron (NM_011770, intron 1 of 7) 528 NM_011770 22779 Mm.106343 NM_011770 ENSMUSG00000025997 Ikzf2 A730095J18Rik|Helios|Zfpn1a2|Znfn1a2 IKAROS family zinc finger 2 protein-coding unique_peak2_23_79_0.691847373204732_6.66785178148973_2.93670826206567-2 chr6 73038993 73039603 + 2.93670826206567 NA intron (NM_001164669, intron 65 of 76) B1_Mur4|SINE|Alu -80550 NM_001190327 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding unique_peak2_23_79_0.691847373204732_6.66785178148973_2.93670826206567 chr5 113998882 113999677 + 2.93670826206567 NA Intergenic (GCCTG)n|Simple_repeat|Simple_repeat -4456 NM_010018 13142 Mm.20115 NM_010018 ENSMUSG00000042096 Dao AI987963|DAAO|DAMOX|Dao-1|Dao1 D-amino acid oxidase protein-coding unique_peak2_15_129_-0.726114549903286_6.65931053807681_2.93670826206567-2 chr17 27591848 27592571 + 2.93670826206567 NA intron (NM_001291046, intron 2 of 4) B1_Mur1|SINE|Alu -26482 NM_001002895 106672 Mm.61488 NM_001002895 ENSMUSG00000062753 AI413582 AI854251 expressed sequence AI413582 protein-coding common_peak2_15_129_-0.726114549903286_6.65931053807681_2.93670826206567 chr4 149136758 149137671 + 2.93670826206567 NA intron (NM_027263, intron 1 of 4) ID_B1|SINE|B4 386 NM_027263 69928 Mm.260893 NM_027263 ENSMUSG00000073705 Apitd1 2610040C18Rik|2810407L01Rik|CENP-S apoptosis-inducing, TAF9-like domain 1 protein-coding common_peak1_15_129_-0.726114549903286_6.65931053807681_2.93670826206567-2 chr15 75135633 75135984 + 2.93670826206567 NA Intergenic Intergenic -19453 NM_001310438 546644 NM_008531 ENSMUSG00000022582 Ly6g Gr-1|Gr1|Ly-6G lymphocyte antigen 6 complex, locus G protein-coding common_peak1_15_129_-0.726114549903286_6.65931053807681_2.93670826206567-3 chr5 100583632 100584014 + 2.93670826206567 NA Intergenic L1MC4a|LINE|L1 -11618 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak1_15_129_-0.726114549903286_6.65931053807681_2.93670826206567 chr1 161785535 161785901 + 2.93670826206567 NA intron (NM_001205243, intron 1 of 2) intron (NM_001205243, intron 1 of 2) 2777 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_136_938_0.221356208881085_9.98565945209432_2.93644330683764 chr15 82046513 82048258 + 2.93644330683764 NA intron (NM_011482, intron 1 of 2) CpG 213 NM_011482 20826 Mm.299312 NM_011482 ENSMUSG00000063480 Nhp2l1 FA-1|Fta1|Snu13|Ssfa1 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) protein-coding common_peak1_136_938_0.221356208881085_9.98565945209432_2.93644330683764 chr7 105639925 105641519 + 2.93644330683764 NA promoter-TSS (NM_029802) promoter-TSS (NM_029802) 182 NM_019502 14356 Mm.220330 NM_019502 ENSMUSG00000089847 Timm10b Fxc1|Tim10b|Tim9b translocase of inner mitochondrial membrane 10B protein-coding common_peak1_102_915_-0.247655904320204_9.71537583593684_2.9363452829344 chr9 59750761 59751867 + 2.9363452829344 NA promoter-TSS (NM_001172071) promoter-TSS (NM_001172071) 140 NM_173018 270163 Mm.249545 NM_173018 ENSMUSG00000039585 Myo9a 4732465J09Rik|C130068I12Rik|C230003M11 myosin IXa protein-coding common_peak1_214_2124_-0.159414368780155_10.9735399415223_2.93599857322116 chr12 104969987 104973264 + 2.93599857322116 NA intron (NM_001042699, intron 3 of 18) intron (NM_001042699, intron 3 of 18) 27052 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak2_111_717_0.251949338567586_9.61381470310684_2.93505032811482 chr13 85188391 85190599 + 2.93505032811482 NA promoter-TSS (NM_023243) promoter-TSS (NM_023243) 18 NM_023243 66671 Mm.18474 NM_023243 ENSMUSG00000021548 Ccnh 6330408H09Rik|AI661354|AV102684|AW538719 cyclin H protein-coding common_peak2_338_3048_0.125533579315936_11.6368872246677_2.93475010734679 chr11 93884408 93887599 + 2.93475010734679 NA promoter-TSS (NM_134012) promoter-TSS (NM_134012) -216 NM_134012 103537 Mm.210334 NM_134012 ENSMUSG00000059474 Mbtd1 AA408199|AI194990|hemp mbt domain containing 1 protein-coding common_peak2_95_583_0.27717553158479_9.32841232467241_2.93328950077705 chr12 70937261 70938587 + 2.93328950077705 NA promoter-TSS (NM_019785) promoter-TSS (NM_019785) 67 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding common_peak1_95_583_0.27717553158479_9.32841232467241_2.93328950077705 chr16 33966280 33967491 + 2.93328950077705 NA exon (NM_009471, exon 1 of 6) exon (NM_009471, exon 1 of 6) 118 NM_009471 22247 Mm.13145 NM_009471 ENSMUSG00000022814 Umps 1700095D23Rik|AA408257|AL033308|BB164745 uridine monophosphate synthetase protein-coding unique_peak2_8_76_-0.988713490008589_5.77242979569061_2.93258054373007-2 chr13 35905942 35906422 + 2.93258054373007 NA intron (NM_145938, intron 1 of 7) CpG 165 NM_145938 208366 Mm.35545 NM_145938 ENSMUSG00000021418 Rpp40 D8Bwg1265e|Rnasep1 ribonuclease P 40 subunit protein-coding unique_peak2_8_76_-0.988713490008589_5.77242979569061_2.93258054373007 chr12 115861875 115862504 + 2.93258054373007 NA Intergenic Intergenic -166395 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA unique_peak2_8_76_-0.988713490008589_5.77242979569061_2.93258054373007-3 chr5 120136052 120136665 + 2.93258054373007 NA intron (NM_028762, intron 16 of 23) intron (NM_028762, intron 16 of 23) 2905 NR_045793 100503427 Mm.446834 NR_045793 ENSMUSG00000097368 Gm10390 ENSMUSG00000072671 predicted gene 10390 ncRNA common_peak1_42_190_0.468298342218202_7.81157799914485_2.931911704659 chr12 77059900 77060663 + 2.931911704659 NA Intergenic Intergenic -98033 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak1_66_356_0.350763436120625_8.65516198208941_2.93182847123478 chr13 53376745 53377613 + 2.93182847123478 NA intron (NM_009269, intron 1 of 14) intron (NM_009269, intron 1 of 14) 182 NM_009269 268656 Mm.240336 NM_009269 ENSMUSG00000021468 Sptlc1 AW552086|C77762|E030036H05|Lcb1 serine palmitoyltransferase, long chain base subunit 1 protein-coding common_peak2_262_2685_-0.140802570151981_11.3208423043515_2.93111321709016 chr12 21285006 21288537 + 2.93111321709016 NA promoter-TSS (NM_008403) promoter-TSS (NM_008403) 474 NM_018813 54451 Mm.356778 NM_018813 ENSMUSG00000054309 Cpsf3 - cleavage and polyadenylation specificity factor 3 protein-coding common_peak2_52_438_-0.362335364092246_8.59690944748924_2.93062072821514 chr16 10544768 10546025 + 2.93062072821514 NA promoter-TSS (NM_177562) promoter-TSS (NM_177562) 57 NM_001204229 74374 Mm.159176 NM_177562 ENSMUSG00000068663 Clec16a 4932416N17Rik|curt|mKIAA0350 C-type lectin domain family 16, member A protein-coding common_peak2_52_438_-0.362335364092246_8.59690944748924_2.93062072821514-2 chr4 3938758 3939548 + 2.93062072821514 NA promoter-TSS (NM_019969) promoter-TSS (NM_019969) 265 NM_001285804 66433 Mm.27406 NM_181391 ENSMUSG00000042198 Chchd7 1810049H20Rik coiled-coil-helix-coiled-coil-helix domain containing 7 protein-coding common_peak2_80_463_0.308361087865306_9.01216153906023_2.93032208681452 chr11 97041370 97042266 + 2.93032208681452 NA promoter-TSS (NM_027026) promoter-TSS (NM_027026) 232 NM_026154 107732 Mm.208946 NM_026154 ENSMUSG00000001445 Mrpl10 0610040E02Rik|C78440|MRP-L8|Rpml8 mitochondrial ribosomal protein L10 protein-coding common_peak2_67_364_0.345008229579504_8.68425676855713_2.9299941732808 chr9 70241565 70244035 + 2.9299941732808 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 35450 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_41_342_-0.417977811187958_8.21307586057883_2.92907175453205 chr6 67266209 67266933 + 2.92907175453205 NA promoter-TSS (NM_001113566) promoter-TSS (NM_001113566) -408 NM_001113564 66870 Mm.240490 NM_025814 ENSMUSG00000036371 Serbp1 1200009K13Rik|9330147J08Rik|AL022786|Pairbp1 serpine1 mRNA binding protein 1 protein-coding common_peak2_95_845_-0.257513762655142_9.59575697179238_2.92880802222194 chr7 43312077 43313941 + 2.92880802222194 NA intron (NM_027264, intron 1 of 4) CpG 252 NM_027264 69930 Mm.45367 NM_027264 ENSMUSG00000012640 Zfp715 2610041B18Rik|mszf15 zinc finger protein 715 protein-coding common_peak1_36_153_0.512997110516509_7.52328509595316_2.92860280966642 chr6 54938158 54939040 + 2.92860280966642 NA intron (NM_172729, intron 5 of 11) intron (NM_172729, intron 5 of 11) 33062 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_36_153_0.512997110516509_7.52328509595316_2.92860280966642 chr11 55120598 55121720 + 2.92860280966642 NA Intergenic Intergenic 23174 NM_010299 14667 Mm.287807 NM_010299 ENSMUSG00000000594 Gm2a AA408702|AW215435|GM2-AP|SAP-3 GM2 ganglioside activator protein protein-coding common_peak1_55_277_0.394235988480775_8.31605906696389_2.92859074920173-2 chr10 19067929 19069007 + 2.92859074920173 NA Intergenic Intergenic -53058 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_55_277_0.394235988480775_8.31605906696389_2.92859074920173 chr1 9943383 9944089 + 2.92859074920173 NA intron (NR_024067, intron 1 of 3) intron (NR_024067, intron 1 of 3) 382 NR_024067 73824 Mm.28311 NR_024067 ENSMUSG00000098234 Snhg6 1110008H02Rik small nucleolar RNA host gene 6 ncRNA common_peak2_53_447_-0.358535044031653_8.62808740004178_2.92764147373769 chr19 7040325 7041188 + 2.92764147373769 NA promoter-TSS (NM_016737) promoter-TSS (NM_016737) -730 NM_016737 20867 Mm.258633 NM_016737 ENSMUSG00000024966 Stip1 Hop|Sti1|p60 stress-induced phosphoprotein 1 protein-coding common_peak1_17_50_0.832260019901172_6.08855535192208_2.9276314178972 chr12 51862833 51863200 + 2.9276314178972 NA Intergenic PB1D10|SINE|Alu -33480 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak1_17_50_0.832260019901172_6.08855535192208_2.9276314178972-2 chr5 122241784 122242160 + 2.9276314178972 NA 3' UTR (NM_001042489, exon 8 of 8) 3' UTR (NM_001042489, exon 8 of 8) 22488 NR_104441 654470 Mm.28804 NM_001039153 ENSMUSG00000038593 Tctn1 G730031O11Rik|Tect1 tectonic family member 1 protein-coding unique_peak1_17_50_0.832260019901172_6.08855535192208_2.9276314178972 chr11 117092123 117092622 + 2.9276314178972 NA Intergenic B1_Mur1|SINE|Alu 15024 NR_105853 102465258 NR_105853 ENSMUSG00000104740 Mir6516 mmu-mir-6516 microRNA 6516 ncRNA common_peak1_17_50_0.832260019901172_6.08855535192208_2.9276314178972-3 chr7 142362543 142363013 + 2.9276314178972 NA intron (NM_177265, intron 2 of 3) intron (NM_177265, intron 2 of 3) 9481 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding unique_peak1_17_50_0.832260019901172_6.08855535192208_2.9276314178972-3 chr8 121192143 121192574 + 2.9276314178972 NA Intergenic Intergenic 64673 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak1_17_50_0.832260019901172_6.08855535192208_2.9276314178972-4 chr9 92267074 92267471 + 2.9276314178972 NA promoter-TSS (NR_105808) promoter-TSS (NR_105808) 89 NR_105808 102465203 NR_105808 ENSMUSG00000098766 Mir6386 Gm27842|mmu-mir-6386 microRNA 6386 ncRNA unique_peak1_17_50_0.832260019901172_6.08855535192208_2.9276314178972-2 chr19 46607271 46607739 + 2.9276314178972 NA intron (NM_001177812, intron 2 of 4) intron (NM_001177812, intron 2 of 4) 8399 NM_146099 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding unique_peak2_10_91_-0.890376524549417_6.0783736937823_2.92763141789719-4 chr5 65199643 65200219 + 2.92763141789719 NA intron (NM_153391, intron 1 of 36) intron (NM_153391, intron 1 of 36) 235 NM_153391 213081 Mm.127550 NM_153391 ENSMUSG00000037890 Wdr19 C330027H04Rik|D330023L08Rik|DYF2|Ift144|PWDMP|mKIAA1638 WD repeat domain 19 protein-coding unique_peak2_10_91_-0.890376524549417_6.0783736937823_2.92763141789719-3 chr3 104220548 104221166 + 2.92763141789719 NA promoter-TSS (NM_133853) promoter-TSS (NM_133853) -451 NM_001159354 99470 Mm.264849 NM_133853 ENSMUSG00000052539 Magi3 4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding unique_peak2_10_91_-0.890376524549417_6.0783736937823_2.92763141789719 chr1 39746260 39747101 + 2.92763141789719 NA Intergenic Intergenic -25691 NM_001145660 619289 Mm.334107 NM_001145660 ENSMUSG00000057173 Rfx8 4933400N17Rik regulatory factor X 8 protein-coding unique_peak2_10_91_-0.890376524549417_6.0783736937823_2.92763141789719-2 chr11 119258509 119259346 + 2.92763141789719 NA intron (NM_175430, intron 16 of 18) intron (NM_175430, intron 16 of 18) -9040 NM_001159324 14387 Mm.4793 NM_008064 ENSMUSG00000025579 Gaa E430018M07Rik glucosidase, alpha, acid protein-coding common_peak2_63_334_0.361460600152745_8.56874758542151_2.92737654540324 chr6 108843259 108845094 + 2.92737654540324 NA intron (NM_138677, intron 4 of 11) ORR1E|LTR|ERVL-MaLR 15535 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding common_peak1_63_334_0.361460600152745_8.56874758542151_2.92737654540324 chr17 71204258 71205646 + 2.92737654540324 NA intron (NM_001164885, intron 1 of 19) intron (NM_001164885, intron 1 of 19) 298 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak2_56_284_0.389680610498068_8.34965841430114_2.92709218412304 chr13 106946668 106947811 + 2.92709218412304 NA exon (NM_025447, exon 1 of 12) exon (NM_025447, exon 1 of 12) 110 NM_025447 66254 Mm.9563 NM_025447 ENSMUSG00000021692 Dimt1 1500031M22Rik|AV111347|Dimt1l DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) protein-coding common_peak1_165_1208_0.19651965110558_10.3378583548019_2.92667554550284 chr2 144527149 144528314 + 2.92667554550284 NA promoter-TSS (NM_172859) promoter-TSS (NM_172859) -14 NM_029763 70408 Mm.389351 NM_029763 ENSMUSG00000027427 Polr3f 2810411G20Rik|3010019O03Rik|3110032A07Rik|RPC39|RPC6 polymerase (RNA) III (DNA directed) polypeptide F protein-coding common_peak1_32_129_0.554952134632425_7.29984388034467_2.92608131868719 chr2 166119039 166119716 + 2.92608131868719 NA intron (NM_001252579, intron 2 of 20) intron (NM_001252579, intron 2 of 20) 35908 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak2_32_129_0.554952134632425_7.29984388034467_2.92608131868719 chr12 51871243 51872288 + 2.92608131868719 NA Intergenic Intergenic -42229 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak1_23_191_-0.571187032629061_7.29936898440662_2.92608131868715-2 chr15 30610224 30610649 + 2.92608131868715 NA intron (NM_008729, intron 3 of 22) intron (NM_008729, intron 3 of 22) -428690 NR_045186 73784 Mm.66947 NR_045186 4930430F21Rik - RIKEN cDNA 4930430F21 gene ncRNA common_peak1_23_191_-0.571187032629061_7.29936898440662_2.92608131868715 chr11 11737543 11738021 + 2.92608131868715 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 47605 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_223_2227_-0.155131833763038_11.0439676004585_2.92550968841595 chr7 16294443 16297972 + 2.92550968841595 NA Intergenic Intergenic -9412 NM_001136471 243846 Mm.482401 NM_172297 ENSMUSG00000041375 Ccdc9 2600011L02Rik coiled-coil domain containing 9 protein-coding common_peak2_54_456_-0.354759336672155_8.65867068672199_2.92532430953865 chr17 35879169 35880529 + 2.92532430953865 NA promoter-TSS (NM_026987) promoter-TSS (NM_026987) 71 NM_026987 69192 Mm.390986 NM_026987 ENSMUSG00000024422 Dhx16 2410006N22Rik|DBP2|Ddx16|mKIAA0577 DEAH (Asp-Glu-Ala-His) box polypeptide 16 protein-coding common_peak1_42_350_-0.40960005005061_8.25052719527926_2.92531966890325 chr11 55460622 55461190 + 2.92531966890325 NA intron (NM_009720, intron 1 of 3) intron (NM_009720, intron 1 of 3) 232 NM_009720 11927 Mm.217759 NM_009720 ENSMUSG00000018585 Atox1 AI256639|Atx1 antioxidant 1 copper chaperone protein-coding common_peak1_131_893_0.226413548850273_9.91733779560845_2.92531459167854 chr10 61257556 61259508 + 2.92531459167854 NA intron (NM_001081127, intron 2 of 21) intron (NM_001081127, intron 2 of 21) 14906 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak1_261_2189_0.146984418544694_11.1702073637609_2.92337757287585 chr1 64755849 64758352 + 2.92337757287585 NA Intergenic Intergenic -19350 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_240_2425_-0.14851233986586_11.1701076651876_2.92337757287585 chr5 93205434 93207269 + 2.92337757287585 NA promoter-TSS (NM_029363) promoter-TSS (NM_029363) 144 NM_017367 12453 Mm.250419 NM_017367 ENSMUSG00000063015 Ccni - cyclin I protein-coding common_peak1_63_538_-0.324663577254626_8.91180967412519_2.92302013161209 chr18 39184965 39186215 + 2.92302013161209 NA intron (NM_175164, intron 11 of 22) intron (NM_175164, intron 11 of 22) 192445 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_94_835_-0.258889341805672_9.57791446117805_2.92269457296558 chr7 123219717 123221152 + 2.92269457296558 NA intron (NM_146198, intron 1 of 16) intron (NM_146198, intron 1 of 16) 5568 NM_146198 233836 Mm.211838 NM_146198 ENSMUSG00000030769 Slc5a11 2010013B02Rik|Kst1|RKST2|SMIT2|Slc5a10 solute carrier family 5 (sodium/glucose cotransporter), member 11 protein-coding common_peak1_21_69_0.730514725748985_6.49454037981946_2.92252345013616-2 chr2 156763300 156763768 + 2.92252345013616 NA 3' UTR (NM_146128, exon 13 of 13) 3' UTR (NM_146128, exon 13 of 13) -11930 NM_172118 98932 Mm.271770 NM_172118 ENSMUSG00000067818 Myl9 AI327049|MLC20|Mylc2c|RLC-C myosin, light polypeptide 9, regulatory protein-coding common_peak2_21_69_0.730514725748985_6.49454037981946_2.92252345013616 chr8 41374782 41375330 + 2.92252345013616 NA promoter-TSS (NM_019734) promoter-TSS (NM_019734) -359 NM_019734 11886 Mm.22547 NM_019734 ENSMUSG00000031591 Asah1 2310081N20Rik|AC|Asah N-acylsphingosine amidohydrolase 1 protein-coding common_peak1_21_69_0.730514725748985_6.49454037981946_2.92252345013616-4 chr7 125474865 125475381 + 2.92252345013616 NA intron (NM_026330, intron 2 of 7) intron (NM_026330, intron 2 of 7) 16419 NM_026330 67711 Mm.4467 NM_026330 ENSMUSG00000030750 Nsmce1 2510027N19Rik NSE1 homolog, SMC5-SMC6 complex component protein-coding common_peak1_21_69_0.730514725748985_6.49454037981946_2.92252345013616-3 chr4 43040543 43041004 + 2.92252345013616 NA promoter-TSS (NM_001253354) promoter-TSS (NM_001253354) -472 NM_001253354 230088 Mm.260162 NM_172691 ENSMUSG00000036002 Fam214b B230312A22Rik family with sequence similarity 214, member B protein-coding common_peak1_21_69_0.730514725748985_6.49454037981946_2.92252345013616 chr17 28005577 28006107 + 2.92252345013616 NA intron (NM_001286040, intron 11 of 24) intron (NM_001286040, intron 11 of 24) 74742 NM_013687 21463 Mm.29758 NM_013687 ENSMUSG00000062859 Tcp11 D17Ken1|Tcp-11 t-complex protein 11 protein-coding common_peak2_110_995_-0.236083764703386_9.84196004971639_2.92251985017224 chr6 146220841 146223228 + 2.92251985017224 NA intron (NM_019923, intron 45 of 56) intron (NM_019923, intron 45 of 56) 280189 NM_010586 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak1_56_474_-0.347284983668137_8.71814121138424_2.92251599110388-2 chr9 32510392 32511487 + 2.92251599110388 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 30513 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding unique_peak2_56_474_-0.347284983668137_8.71814121138424_2.92251599110388 chr4 137375196 137377312 + 2.92251599110388 NA Intergenic Intergenic -18495 NM_001243769 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak2_56_474_-0.347284983668137_8.71814121138424_2.92251599110388 chr6 48593072 48594632 + 2.92251599110388 NA promoter-TSS (NM_001079905) promoter-TSS (NM_001079905) -31 NM_001079903 58887 Mm.219183 NM_175099 ENSMUSG00000052751 Repin1 AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 replication initiator 1 protein-coding common_peak1_56_474_-0.347284983668137_8.71814121138424_2.92251599110388 chr1 170175107 170175834 + 2.92251599110388 NA promoter-TSS (NM_133806) promoter-TSS (NM_133806) -506 NM_001305045 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding common_peak2_138_956_0.219609666306576_10.0121799476393_2.9223535334458 chr12 100500443 100502864 + 2.9223535334458 NA intron (NM_001033213, intron 1 of 19) MER33|DNA|hAT-Charlie 19169 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak2_87_766_-0.27006040243627_9.4480525662848_2.92233189737415 chr16 24214949 24217837 + 2.92233189737415 NA Intergenic Intergenic -176957 NM_178665 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_87_766_-0.27006040243627_9.4480525662848_2.92233189737415 chr14 75192303 75193634 + 2.92233189737415 NA intron (NM_008879, intron 2 of 16) intron (NM_008879, intron 2 of 16) -49319 NM_019775 56373 Mm.24242 NM_019775 ENSMUSG00000021999 Cpb2 1110032P04Rik|4930405E17Rik|AI255929|CPR|Cpu|TAFI carboxypeptidase B2 (plasma) protein-coding common_peak1_61_320_0.36686502879836_8.50986200152148_2.92227312105265 chr17 80289502 80290398 + 2.92227312105265 NA promoter-TSS (NM_194269) promoter-TSS (NM_194269) -262 NM_194269 378462 Mm.45208 NM_194269 ENSMUSG00000045257 Morn2 Mopt MORN repeat containing 2 protein-coding common_peak2_57_483_-0.34358761157567_8.74706943148676_2.92195263297148 chr4 53919409 53921528 + 2.92195263297148 NA Intergenic Intergenic 94423 NM_028053 52076 Mm.27184 NM_028053 ENSMUSG00000028420 Tmem38b 1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b transmembrane protein 38B protein-coding common_peak1_57_483_-0.34358761157567_8.74706943148676_2.92195263297148 chr13 92094559 92095507 + 2.92195263297148 NA Intergenic L1MB7|LINE|L1 -106991 NM_009027 19418 Mm.248630 NM_009027 ENSMUSG00000021708 Rasgrf2 6330417G04Rik|AW048350|Grf2|Ras-GRF2 RAS protein-specific guanine nucleotide-releasing factor 2 protein-coding common_peak2_207_1623_0.169922261014824_10.7502970476926_2.92192072466439 chr2 102898851 102902175 + 2.92192072466439 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 1152 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak2_60_313_0.369898702155345_8.4795700999693_2.92047197715291 chr16 17910621 17911451 + 2.92047197715291 NA intron (NM_022408, intron 1 of 9) intron (NM_022408, intron 1 of 9) 312 NM_022408 27886 Mm.256480 NM_022408 ENSMUSG00000003527 Dgcr14 AI462402|D16H22S1269E|Dgcr1|Dgsi|ES2|Es2el DiGeorge syndrome critical region gene 14 protein-coding common_peak1_19_159_-0.630793867256586_7.00653116125907_2.9203274454383 chr12 76404278 76404855 + 2.9203274454383 NA exon (NM_001002012, exon 2 of 2) exon (NM_001002012, exon 2 of 2) 196 NM_008301 15512 Mm.296181 NM_008301 ENSMUSG00000059970 Hspa2 70kDa|HSP70.2|HSP70A2|Hsp70-2 heat shock protein 2 protein-coding common_peak2_64_548_-0.323747818672302_8.93878842966905_2.92027646680752 chr7 30625385 30626715 + 2.92027646680752 NA intron (NM_025628, intron 1 of 3) CpG 101 NM_025628 110323 Mm.400 NM_025628 ENSMUSG00000036751 Cox6b1 2010000G05Rik|Cox6b cytochrome c oxidase, subunit VIb polypeptide 1 protein-coding common_peak2_78_679_-0.287291845024386_9.26574501362551_2.92019523411544 chr14 66256875 66259013 + 2.92019523411544 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) 23108 NM_172498 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_109_700_0.254632695561648_9.58058698179145_2.91927197625873 chr1 138516817 138518277 + 2.91927197625873 NA intron (NM_001311148, intron 5 of 7) intron (NM_001311148, intron 5 of 7) 102210 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak2_59_306_0.373173898413881_8.44868179457712_2.91921409575105 chr11 11731450 11733309 + 2.91921409575105 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 42202 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_59_306_0.373173898413881_8.44868179457712_2.91921409575105 chr11 118230078 118231268 + 2.91921409575105 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 17919 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak2_17_144_-0.675223728142267_6.8422972259438_2.91909690577703-4 chr2 27492317 27493478 + 2.91909690577703 NA Intergenic ORR1B2|LTR|ERVL-MaLR -17224 NM_001113574 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding common_peak1_17_144_-0.675223728142267_6.8422972259438_2.91909690577703-3 chr2 109280367 109280734 + 2.91909690577703 NA promoter-TSS (NM_139303) promoter-TSS (NM_139303) -188 NM_139303 228421 Mm.274086 NM_139303 ENSMUSG00000027115 Kif18a AU024633|B130001M12Rik|gcd2 kinesin family member 18A protein-coding unique_peak2_17_144_-0.675223728142267_6.8422972259438_2.91909690577703-3 chr14 32784034 32784860 + 2.91909690577703 NA Intergenic Intergenic -1516 NM_001163616 69069 Mm.261609 NM_001163616 ENSMUSG00000041707 1810011H11Rik 4733401I05Rik RIKEN cDNA 1810011H11 gene protein-coding common_peak1_17_144_-0.675223728142267_6.8422972259438_2.91909690577703 chr10 79533359 79533807 + 2.91909690577703 NA intron (NM_001302389, intron 1 of 5) CpG 204 NM_001302442 50784 Mm.28873 NM_015817 ENSMUSG00000052151 Plpp2 Lpp2|PAP2-G|PAP2-gamma|PAP2c|Ppap2c phospholipid phosphatase 2 protein-coding unique_peak2_17_144_-0.675223728142267_6.8422972259438_2.91909690577703-5 chr3 107235138 107236414 + 2.91909690577703 NA intron (NM_001044382, intron 2 of 2) intron (NM_001044382, intron 2 of 2) 3931 NM_001044382 246691 Mm.490697 NM_001044382 ENSMUSG00000070368 Prok1 EG-VEGF prokineticin 1 protein-coding unique_peak2_17_144_-0.675223728142267_6.8422972259438_2.91909690577703 chr10 81511180 81512001 + 2.91909690577703 NA intron (NM_010304, intron 4 of 6) intron (NM_010304, intron 4 of 6) -11453 NM_010102 13611 Mm.33065 NM_010102 ENSMUSG00000044199 S1pr4 Edg6|Lpc1|S1p4 sphingosine-1-phosphate receptor 4 protein-coding common_peak1_17_144_-0.675223728142267_6.8422972259438_2.91909690577703-2 chr11 11726812 11727195 + 2.91909690577703 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 36826 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding unique_peak2_17_144_-0.675223728142267_6.8422972259438_2.91909690577703-2 chr11 84915698 84916564 + 2.91909690577703 NA intron (NM_001005223, intron 1 of 4) intron (NM_001005223, intron 1 of 4) 225 NM_001005223 448850 Mm.379733 NM_001005223 ENSMUSG00000020526 Znhit3 Myohd1|Trip3 zinc finger, HIT type 3 protein-coding common_peak1_58_299_0.376707714545944_8.41717254776885_2.918535163132 chr13 51776598 51777560 + 2.918535163132 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 16668 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_204_1593_0.171112937953275_10.7239923829671_2.91783431809853 chr11 116198105 116199969 + 2.91783431809853 NA promoter-TSS (NM_001271898) promoter-TSS (NM_001271898) 8 NM_001271898 11430 Mm.356689 NM_015729 ENSMUSG00000020777 Acox1 AOX|Acox|D130055E20Rik|Paox acyl-Coenzyme A oxidase 1, palmitoyl protein-coding common_peak1_26_95_0.637245066118439_6.90358503378038_2.9177278068947 chr11 70786845 70787371 + 2.9177278068947 NA Intergenic Intergenic 22661 NM_177565 193043 Mm.40966 NM_177565 ENSMUSG00000043602 Zfp3 AI854635|B230309J24|Fnp-1|Zfp-3 zinc finger protein 3 protein-coding common_peak1_26_95_0.637245066118439_6.90358503378038_2.9177278068947-2 chr14 27242336 27242926 + 2.9177278068947 NA intron (NM_027871, intron 1 of 10) intron (NM_027871, intron 1 of 10) 4621 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_26_95_0.637245066118439_6.90358503378038_2.9177278068947 chr11 46466421 46467086 + 2.9177278068947 NA intron (NM_134250, intron 3 of 6) intron (NM_134250, intron 3 of 6) 11822 NM_134250 171285 Mm.72168 NM_134250 ENSMUSG00000020399 Havcr2 TIM-3|Tim3|Timd3 hepatitis A virus cellular receptor 2 protein-coding common_peak1_222_1777_0.162444265124634_10.8772617413921_2.91770362151053 chrX 42149301 42150515 + 2.91770362151053 NA promoter-TSS (NM_021465) promoter-TSS (NM_021465) 496 NM_001077712 20843 Mm.290422 NM_021465 ENSMUSG00000025862 Stag2 9230105L23Rik|B230112I07Rik|SA-2|SAP2 stromal antigen 2 protein-coding common_peak2_307_3230_-0.127818872119585_11.5938555992056_2.91764910616032 chr12 102306249 102310969 + 2.91764910616032 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 24968 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_60_511_-0.335480548953027_8.83225972552349_2.91750481130436 chr2 65170342 65171426 + 2.91750481130436 NA intron (NM_177025, intron 1 of 13) intron (NM_177025, intron 1 of 13) 67742 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak2_456_4464_0.103767706147961_12.1763283130826_2.91702336504899 chr13 46734649 46738159 + 2.91702336504899 NA Intergenic Intergenic -8555 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak1_21_175_-0.599633875943346_7.15961468066562_2.91668420940752-2 chr5 124338685 124339177 + 2.91668420940752 NA exon (NM_001134717, exon 2 of 3) exon (NM_001134717, exon 2 of 3) 10842 NM_001134717 72650 Mm.121658 NM_028310 ENSMUSG00000047635 2810006K23Rik - RIKEN cDNA 2810006K23 gene protein-coding common_peak1_21_175_-0.599633875943346_7.15961468066562_2.91668420940752 chr1 166048307 166048951 + 2.91668420940752 NA Intergenic Intergenic -45995 NM_011137 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding common_peak1_37_159_0.505048419695884_7.5744523047353_2.91592106845392 chr11 6274895 6275608 + 2.91592106845392 NA promoter-TSS (NM_134020) promoter-TSS (NM_134020) -414 NM_134020 103694 Mm.254495 NM_134020 ENSMUSG00000004394 Tmed4 1110014L17Rik|AI326346 transmembrane p24 trafficking protein 4 protein-coding common_peak1_37_159_0.505048419695884_7.5744523047353_2.91592106845392-2 chr6 8512205 8513046 + 2.91592106845392 NA intron (NM_133236, intron 1 of 7) (CTG)n|Simple_repeat|Simple_repeat 3025 NM_133236 170772 Mm.210787 NM_133236 ENSMUSG00000029638 Glcci1 2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1 glucocorticoid induced transcript 1 protein-coding common_peak1_26_215_-0.532679935323873_7.48854753450153_2.91406764438071 chr6 54957788 54958341 + 2.91406764438071 NA intron (NM_172729, intron 1 of 11) intron (NM_172729, intron 1 of 11) 13597 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak1_26_215_-0.532679935323873_7.48854753450153_2.91406764438071-4 chr9 95279401 95279984 + 2.91406764438071 NA Intergenic Intergenic 127578 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak1_26_215_-0.532679935323873_7.48854753450153_2.91406764438071-2 chr7 46391333 46391943 + 2.91406764438071 NA Intergenic Intergenic -4830 NM_008421 16502 Mm.249386 NM_008421 ENSMUSG00000058975 Kcnc1 C230009H10Rik|KShIIIB|KV4|Kcr2-1|Kv3.1|NGK2|Shaw potassium voltage gated channel, Shaw-related subfamily, member 1 protein-coding common_peak1_26_215_-0.532679935323873_7.48854753450153_2.91406764438071-3 chr8 91071689 91072268 + 2.91406764438071 NA intron (NM_001282000, intron 1 of 20) MTD|LTR|ERVL-MaLR 1921 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 retinoblastoma-like 2 protein-coding common_peak2_126_849_0.230891663148981_9.84676486259955_2.91398533082402 chr16 33184776 33186137 + 2.91398533082402 NA 5' UTR (NM_176840, exon 1 of 13) 5' UTR (NM_176840, exon 1 of 13) 385 NM_176840 106326 Mm.486405 NM_176840 ENSMUSG00000022807 Osbpl11 9430097N02Rik|AI132306|AU019795|ORP-11 oxysterol binding protein-like 11 protein-coding common_peak2_378_4123_-0.112797257480103_11.9534299886281_2.91394122074583 chr6 142568910 142574251 + 2.91394122074583 NA promoter-TSS (NM_008428) promoter-TSS (NM_008428) -224 NM_008428 16523 Mm.1482 NM_008428 ENSMUSG00000030247 Kcnj8 AI448900|Kir6.1|gnite|slmbr|sltr|uKATP-1 potassium inwardly-rectifying channel, subfamily J, member 8 protein-coding common_peak1_77_670_-0.290613195405966_9.2448623584972_2.91341247390347 chr19 8870759 8871505 + 2.91341247390347 NA promoter-TSS (NM_146093) promoter-TSS (NM_146093) -427 NM_146093 225896 Mm.27839 NM_146093 ENSMUSG00000071655 Ubxn1 2B28|4930455J02Rik|D19Ertd721e|T25529 UBX domain protein 1 protein-coding common_peak2_37_307_-0.439810026111656_8.04688152763907_2.91336728131588 chr13 13563941 13565751 + 2.91336728131588 NA Intergenic Intergenic -25563 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding unique_peak2_37_307_-0.439810026111656_8.04688152763907_2.91336728131588 chr10 91137705 91139123 + 2.91336728131588 NA Intergenic ORR1B2|LTR|ERVL-MaLR -14451 NM_133668 18674 Mm.298 NM_133668 ENSMUSG00000061904 Slc25a3 5730556H19Rik|PTP|Phc solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 protein-coding common_peak2_37_307_-0.439810026111656_8.04688152763907_2.91336728131588-2 chr9 98601017 98601871 + 2.91336728131588 NA intron (NM_025485, intron 1 of 7) CpG 235 NM_025485 64655 Mm.17949 NM_025485 ENSMUSG00000032459 Mrps22 3100002P07Rik|Rpms22 mitochondrial ribosomal protein S22 protein-coding common_peak1_37_307_-0.439810026111656_8.04688152763907_2.91336728131588 chr4 62561492 62562334 + 2.91336728131588 NA intron (NM_019492, intron 1 of 19) IMPB_01|Satellite|Satellite 2066 NM_019492 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_85_746_-0.272624951348932_9.40865195711477_2.91318586372574 chr2 84726651 84727977 + 2.91318586372574 NA promoter-TSS (NM_133840) promoter-TSS (NM_133840) -46 NM_133840 98985 Mm.21583 NM_133840 ENSMUSG00000027079 Clp1 AI462438|Heab CLP1, cleavage and polyadenylation factor I subunit protein-coding common_peak1_151_1077_0.206059674203452_10.1771712998542_2.91251454687647 chr4 141873756 141875404 + 2.91251454687647 NA exon (NM_025994, exon 1 of 4) exon (NM_025994, exon 1 of 4) 340 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_44_367_-0.397383318492381_8.32487029681082_2.91221886362228 chr3 88502592 88503303 + 2.91221886362228 NA exon (NM_001111102, exon 1 of 10) exon (NM_001111102, exon 1 of 10) 405 NM_001111102 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_187_1423_0.180622278832333_10.5660445703826_2.91116463442696 chr11 83301831 83303679 + 2.91116463442696 NA promoter-TSS (NM_001035854) promoter-TSS (NM_001035854) 58 NM_001035854 71770 Mm.39053 NM_027915 ENSMUSG00000035152 Ap2b1 1300012O03Rik|AI788979 adaptor-related protein complex 2, beta 1 subunit protein-coding common_peak2_198_1533_0.173899026344484_10.6700322806752_2.91079385989156 chr5 124540040 124542141 + 2.91079385989156 NA intron (NM_019770, intron 1 of 3) CpG 299 NM_019770 56334 Mm.325307 NM_019770 ENSMUSG00000029390 Tmed2 1110032D12Rik|1810020N21Rik|Rnp24|Sid394|p24beta1 transmembrane p24 trafficking protein 2 protein-coding common_peak2_144_1012_0.212350442589752_10.090593680096_2.91038040165276 chr5 130143863 130145640 + 2.91038040165276 NA promoter-TSS (NM_172509) promoter-TSS (NM_172509) -137 NM_172509 212919 Mm.55812 NM_172509 ENSMUSG00000034110 Kctd7 4932409E18|9430010P06Rik potassium channel tetramerisation domain containing 7 protein-coding common_peak2_29_112_0.588477470182515_7.11441769750645_2.90997540021376-2 chr17 17591371 17592081 + 2.90997540021376 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 32763 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding unique_peak2_29_112_0.588477470182515_7.11441769750645_2.90997540021376 chr5 134394378 134395297 + 2.90997540021376 NA intron (NM_001081469, intron 9 of 27) intron (NM_001081469, intron 9 of 27) 61425 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding common_peak1_29_112_0.588477470182515_7.11441769750645_2.90997540021376 chr7 101363127 101363632 + 2.90997540021376 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) -14743 NM_001040112 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak2_29_112_0.588477470182515_7.11441769750645_2.90997540021376 chr11 115646692 115647566 + 2.90997540021376 NA intron (NM_001313936, intron 4 of 5) intron (NM_001313936, intron 4 of 5) -18834 NM_001252395 67283 Mm.383426 NM_026071 ENSMUSG00000020744 Slc25a19 2900089E13Rik|DNC|MUP1|TPC solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein-coding common_peak1_108_692_0.255030693392422_9.56422688883342_2.90980867571046 chr13 94976075 94976918 + 2.90980867571046 NA 5' UTR (NM_172590, exon 1 of 13) 5' UTR (NM_172590, exon 1 of 13) 152 NM_172590 218460 Mm.33856 NM_172590 ENSMUSG00000042015 Wdr41 B830029I03Rik|MSTP048 WD repeat domain 41 protein-coding common_peak1_291_3034_-0.131937152384705_11.5015122249507_2.90949263328364 chr19 8988657 8990790 + 2.90949263328364 NA intron (NM_009643, intron 1 of 4) CpG 439 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_103_650_0.262132133848009_9.47757980008964_2.90877715660865 chr2 119156172 119157180 + 2.90877715660865 NA intron (NM_001033136, intron 1 of 12) CpG 358 NM_001033136 67809 Mm.475909 NM_001033136 ENSMUSG00000070730 Rmdn3 1200015F23Rik|AI131757|Fam82a2|Ptpip51|RMD-3|Rmd3 regulator of microtubule dynamics 3 protein-coding common_peak2_160_1519_-0.187858694971968_10.475926260845_2.90778824536386 chr4 155891308 155893202 + 2.90778824536386 NA promoter-TSS (NM_001033490) promoter-TSS (NM_001033490) 380 NM_207223 140500 Mm.219591 NM_207223 ENSMUSG00000029033 Acap3 Centb5|Kiaa1716-hp|mKIAA1716 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 protein-coding unique_peak1_14_37_0.934116607967763_5.71498581742747_2.90716673056922 chr7 67494655 67495075 + 2.90716673056922 NA Intergenic Intergenic -122007 NM_001291195 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak1_14_121_-0.748693216151539_6.55639072948712_2.90691214509621-2 chr7 139970302 139970700 + 2.90691214509621 NA Intergenic Intergenic 8254 NM_001033465 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding common_peak1_14_121_-0.748693216151539_6.55639072948712_2.90691214509621 chr1 138156015 138156386 + 2.90691214509621 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 18926 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding unique_peak2_14_121_-0.748693216151539_6.55639072948712_2.90691214509621 chr11 103350290 103351132 + 2.90691214509621 NA TTS (NR_045346) TTS (NR_045346) 5958 NR_045346 653030 Mm.440684 NR_045346 ENSMUSG00000085887 Arhgap27os3 F830206d12rik|Gm11648|OTTMUSG00000003073 Rho GTPase activating protein 27, opposite strand 3 ncRNA common_peak1_38_315_-0.430837298569242_8.08836209889248_2.90561558978689 chr10 62980238 62980834 + 2.90561558978689 NA intron (NM_027425, intron 1 of 17) CpG 313 NM_027425 70432 Mm.234587 NM_027425 ENSMUSG00000020070 Rufy2 2610111M19Rik|AI844453|Denn|LZ-FYVE|ZFYVE13 RUN and FYVE domain-containing 2 protein-coding common_peak1_33_273_-0.4678835108_7.86409032756053_2.9054210095986-2 chr10 76237953 76238403 + 2.9054210095986 NA promoter-TSS (NR_126571) promoter-TSS (NR_126571) -313 NM_133182 15468 Mm.32020 NM_133182 ENSMUSG00000020230 Prmt2 AI504737|Hrmt1l1 protein arginine N-methyltransferase 2 protein-coding common_peak1_33_273_-0.4678835108_7.86409032756053_2.9054210095986 chr1 177441361 177442087 + 2.9054210095986 NA Intergenic CpG -2937 NM_001012330 30928 Mm.330700 NM_013915 ENSMUSG00000063659 Zbtb18 RP58|Zfp238|Znf238 zinc finger and BTB domain containing 18 protein-coding common_peak1_112_1014_-0.231744513900138_9.87139175512247_2.90540758895017 chr16 23984341 23985565 + 2.90540758895017 NA intron (NM_009744, intron 1 of 9) intron (NM_009744, intron 1 of 9) 3659 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_208_1634_0.168670696139298_10.7594102684551_2.90529448452437 chr15 101245363 101247632 + 2.90529448452437 NA Intergenic CpG -20349 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding common_peak1_91_805_-0.262950602061744_9.5231607274971_2.90517720391901 chr7 16614091 16615467 + 2.90517720391901 NA 5' UTR (NM_172739, exon 1 of 7) 5' UTR (NM_172739, exon 1 of 7) 214 NM_172739 232906 Mm.28646 NM_172739 ENSMUSG00000058230 Arhgap35 6430596G11Rik|AI841135|Grlf1|mKIAA1722|p190A|p190RhoGAP Rho GTPase activating protein 35 protein-coding common_peak1_38_165_0.497904018260936_7.62399144047739_2.90517431584792-2 chr7 28013918 28014587 + 2.90517431584792 NA promoter-TSS (NM_001254951) promoter-TSS (NM_001254951) -137 NM_001254951 100043772 Mm.129275 NM_001100456 ENSMUSG00000096916 Zfp850 C130069I09Rik|Gm4636 zinc finger protein 850 protein-coding common_peak1_38_165_0.497904018260936_7.62399144047739_2.90517431584792 chr4 108318758 108319474 + 2.90517431584792 NA Intergenic Intergenic -9036 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding unique_peak2_38_165_0.497904018260936_7.62399144047739_2.90517431584792 chr4 32169832 32171228 + 2.90517431584792 NA Intergenic Intergenic 206423 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_38_165_0.497904018260936_7.62399144047739_2.90517431584792-3 chr8 77610103 77610871 + 2.90517431584792 NA 5' UTR (NM_145599, exon 1 of 10) 5' UTR (NM_145599, exon 1 of 10) 166 NM_145599 234463 Mm.273578 NM_145599 ENSMUSG00000031617 Tmem184c 8430433H16Rik|AI645453|AL033298|BC004056|Tmem34 transmembrane protein 184C protein-coding common_peak1_84_737_-0.275835158207904_9.38955942695644_2.90502062487443 chr11 20248595 20249692 + 2.90502062487443 NA intron (NM_172260, intron 1 of 6) CpG 281 NM_172260 216543 Mm.260314 NM_172260 ENSMUSG00000044066 Cep68 6030463E10Rik|AI481761|BC027174|Kiaa0582 centrosomal protein 68 protein-coding common_peak1_33_135_0.542685730910188_7.35880570670543_2.90485521277416-3 chr19 42128363 42129072 + 2.90485521277416 NA intron (NM_027106, intron 1 of 2) intron (NM_027106, intron 1 of 2) 276 NM_027106 69534 Mm.30060 NM_027106 ENSMUSG00000018821 Avpi1 2310008N12Rik|AA410041|VIT32|esu|mVIT32 arginine vasopressin-induced 1 protein-coding common_peak1_33_135_0.542685730910188_7.35880570670543_2.90485521277416-4 chr8 86888389 86889039 + 2.90485521277416 NA Intergenic Intergenic -3456 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_33_135_0.542685730910188_7.35880570670543_2.90485521277416 chr11 101416936 101417645 + 2.90485521277416 NA intron (NM_144829, intron 1 of 11) CpG-2640 143 NM_144829 69684 Mm.146283 NM_144829 ENSMUSG00000075528 Aarsd1 1110069E20Rik|2310044P18Rik|AA589600|AlaX|AlaXp-II alanyl-tRNA synthetase domain containing 1 protein-coding common_peak1_33_135_0.542685730910188_7.35880570670543_2.90485521277416-2 chr15 103168892 103169428 + 2.90485521277416 NA Intergenic CpG -5876 NM_027885 71726 Mm.254820 NM_027885 ENSMUSG00000036061 Smug1 1200013B09Rik|A930006H09Rik|C85220 single-strand selective monofunctional uracil DNA glycosylase protein-coding common_peak1_233_2342_-0.150450961915634_11.1189157579053_2.90430788501573 chr4 139192866 139194450 + 2.90430788501573 NA promoter-TSS (NM_001271405) promoter-TSS (NM_001271405) -453 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_189_1839_-0.170407949482808_10.760286076203_2.90379346822482 chr1 36263646 36265728 + 2.90379346822482 NA TTS (NM_153408) TTS (NM_153408) 8738 NM_153408 214854 Mm.389110 NM_153408 ENSMUSG00000047180 Neurl3 2010300P06Rik|Lincr neuralized E3 ubiquitin protein ligase 3 protein-coding common_peak1_367_3388_0.118266127354937_11.7857769851615_2.90375328216561 chr11 103172723 103176485 + 2.90375328216561 NA intron (NM_019679, intron 1 of 26) intron (NM_019679, intron 1 of 26) 3466 NM_019679 57778 Mm.138913 NM_019679 ENSMUSG00000055805 Fmnl1 8030453N10Rik|AI553564|Fmnl|Fnrl|Frls formin-like 1 protein-coding common_peak1_45_376_-0.393347597988798_8.36174691427426_2.90318184397537 chr1 21381524 21382410 + 2.90318184397537 NA Intergenic B1_Mus1|SINE|Alu -1589 NM_001113187 98582 Mm.326336 NM_001113187 ENSMUSG00000085079 Khdc1b AU014713|AU015226|AU024076|AY238603|C85331|C86372|C88118|Khdc1|Khdc1c KH domain containing 1B protein-coding common_peak2_174_1672_-0.178670428636499_10.6188865157201_2.89713406709335 chr2 105397920 105400658 + 2.89713406709335 NA promoter-TSS (NM_009037) promoter-TSS (NM_009037) 30 NM_009037 19672 Mm.4876 NM_009037 ENSMUSG00000005973 Rcn1 Rcn reticulocalbin 1 protein-coding common_peak2_149_1400_-0.195479220954793_10.3545016299534_2.89659930869984 chr10 79925541 79928375 + 2.89659930869984 NA promoter-TSS (NM_007880) promoter-TSS (NM_007880) -85 NM_001288626 13496 Mm.301282 NM_007880 ENSMUSG00000019564 Arid3a Bright|Dri1|Dril1 AT rich interactive domain 3A (BRIGHT-like) protein-coding common_peak2_146_1031_0.209783497640714_10.1161190042436_2.8963363663739 chr1 92810596 92813560 + 2.8963363663739 NA Intergenic Intergenic -19608 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_418_3998_0.109162864506557_12.0200049980634_2.89417120989216 chr6 145119920 145124487 + 2.89417120989216 NA intron (NM_008511, intron 1 of 18) intron (NM_008511, intron 1 of 18) 464 NM_008511 16970 Mm.843 NM_008511 ENSMUSG00000030263 Lrmp D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1 lymphoid-restricted membrane protein protein-coding common_peak2_267_2255_0.144216970123642_11.2116598374606_2.89269900911502 chr6 99094412 99097099 + 2.89269900911502 NA intron (NM_053202, intron 4 of 18) intron (NM_053202, intron 4 of 18) -67457 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_34_281_-0.45810563787526_7.91049853346116_2.89239843664148 chr1 127868702 127869425 + 2.89239843664148 NA intron (NM_178690, intron 2 of 23) CpG-490 290 NM_178690 226407 Mm.489713 NM_178690 ENSMUSG00000036104 Rab3gap1 1700003B17Rik|4732493F09Rik|AL117896|Rab3gap|p130 RAB3 GTPase activating protein subunit 1 protein-coding unique_peak2_34_281_-0.45810563787526_7.91049853346116_2.89239843664148 chr3 135584851 135586366 + 2.89239843664148 NA intron (NM_008689, intron 24 of 24) MTD|LTR|ERVL-MaLR 99997 NM_027288 110173 Mm.280536 NM_027288 ENSMUSG00000028164 Manba 2410030O07Rik|B930014J03Rik|Bmn mannosidase, beta A, lysosomal protein-coding unique_peak2_47_223_0.433032857220848_8.02387135066803_2.89222466392605 chr5 122219071 122220961 + 2.89222466392605 NA intron (NM_028752, intron 2 of 6) intron (NM_028752, intron 2 of 6) 9729 NM_028752 74096 Mm.28804 NM_028752 ENSMUSG00000064267 Hvcn1 0610039P13Rik|AI450555|BTS|HV1|Vsop.|mVSOP hydrogen voltage-gated channel 1 protein-coding common_peak2_47_223_0.433032857220848_8.02387135066803_2.89222466392605 chr7 101377131 101378703 + 2.89222466392605 NA promoter-TSS (NM_001040112) promoter-TSS (NM_001040112) -205 NM_001040112 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_89_535_0.286701758293216_9.20944006960438_2.89159048394187 chr19 43673398 43674934 + 2.89159048394187 NA intron (NM_145156, intron 1 of 3) intron (NM_145156, intron 1 of 3) 715 NM_145156 246696 Mm.23827 NM_145156 ENSMUSG00000040414 Slc25a28 2210403D18Rik|Mfrn2|Mrs3/4 solute carrier family 25, member 28 protein-coding common_peak1_289_3009_-0.132166559069821_11.4894644921122_2.89154539287465 chr4 137387369 137389202 + 2.89154539287465 NA Intergenic CpG 21506 NM_001126318 242711 Mm.475541 NM_001126318 ENSMUSG00000078520 Cela3a Gm13011|OTTMUSG00000009877 chymotrypsin-like elastase family, member 3A protein-coding common_peak1_46_217_0.434946762649091_7.98565770610147_2.89142471468608 chr4 123411260 123412250 + 2.89142471468608 NA 5' UTR (NM_001167918, exon 1 of 1) 5' UTR (NM_001167918, exon 1 of 1) 156 NM_001167918 442834 Mm.483803 NM_001167918 D830031N03Rik Kiaa0754|mKIAA0754 RIKEN cDNA D830031N03 gene protein-coding common_peak2_70_603_-0.305245193478061_9.08578214258605_2.8900354940524 chr3 19256619 19258616 + 2.8900354940524 NA intron (NM_008802, intron 2 of 12) MIRc|SINE|MIR 7391 NM_008802 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak1_69_593_-0.306261095090877_9.06118857325533_2.88994077893968 chr11 97884131 97884918 + 2.88994077893968 NA promoter-TSS (NM_001081435) promoter-TSS (NM_001081435) -370 NM_001081435 72973 Mm.245939 NM_001081435 ENSMUSG00000070336 Fbxo47 2900052P03Rik|Gm1562 F-box protein 47 protein-coding common_peak1_69_593_-0.306261095090877_9.06118857325533_2.88994077893968-2 chr7 47139222 47140586 + 2.88994077893968 NA Intergenic Intergenic -6220 NM_013643 19259 Mm.4654 NM_013643 ENSMUSG00000030854 Ptpn5 Step protein tyrosine phosphatase, non-receptor type 5 protein-coding common_peak1_115_753_0.243467223616618_9.68015432507697_2.8898711028671 chr3 138742060 138743285 + 2.8898711028671 NA intron (NR_121195, intron 1 of 7) CpG 464 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding common_peak2_234_1903_0.156418910996393_10.9730272188061_2.88978615785281 chr16 91372131 91374901 + 2.88978615785281 NA intron (NM_010509, intron 1 of 8) (CA)n|Simple_repeat|Simple_repeat 733 NM_001110498 15976 Mm.6834 NM_010509 ENSMUSG00000022971 Ifnar2 AI747302|Ifnar-2 interferon (alpha and beta) receptor 2 protein-coding common_peak2_131_894_0.224800697881973_9.9181442210926_2.88974934239268 chr4 129671604 129673473 + 2.88974934239268 NA intron (NM_008468, intron 1 of 13) CpG 229 NM_008468 16650 Mm.202358 NM_008468 ENSMUSG00000003731 Kpna6 IPOA7|Kpna5|NPI-2 karyopherin (importin) alpha 6 protein-coding unique_peak2_48_402_-0.377759791617283_8.46575613271933_2.88962986755851 chr9 95327681 95329493 + 2.88962986755851 NA Intergenic Lx4A|LINE|L1 78683 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak2_48_402_-0.377759791617283_8.46575613271933_2.88962986755851-3 chr5 21700993 21702262 + 2.88962986755851 NA promoter-TSS (NM_178728) promoter-TSS (NM_178728) -282 NM_178728 242864 Mm.153292 NM_178728 ENSMUSG00000044968 Napepld A530089G06|Mbldc1|NAPE-PLD N-acyl phosphatidylethanolamine phospholipase D protein-coding common_peak2_48_402_-0.377759791617283_8.46575613271933_2.88962986755851-2 chr2 21204774 21206444 + 2.88962986755851 NA promoter-TSS (NM_001001297) promoter-TSS (NM_001001297) -115 NM_001001297 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding common_peak2_48_402_-0.377759791617283_8.46575613271933_2.88962986755851 chr18 37969097 37970346 + 2.88962986755851 NA promoter-TSS (NM_175684) promoter-TSS (NM_175684) 10 NM_175684 319262 Mm.285060 NM_175684 ENSMUSG00000038524 Fchsd1 A030002D08Rik FCH and double SH3 domains 1 protein-coding common_peak1_48_402_-0.377759791617283_8.46575613271933_2.88962986755851 chr10 13970601 13971578 + 2.88962986755851 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 4710 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak2_224_2237_-0.153710096533441_11.0511392727097_2.88945608112199 chr11 69323049 69326876 + 2.88945608112199 NA exon (NM_001024206, exon 4 of 5) exon (NM_001024206, exon 4 of 5) 976 NM_001024206 245828 Mm.28073 NM_001024206 ENSMUSG00000049299 Trappc1 BET5|D11Ertd172e|MUM2 trafficking protein particle complex 1 protein-coding common_peak1_95_584_0.274707275994041_9.32964645246779_2.88926590401319 chr2 165492696 165493884 + 2.88926590401319 NA promoter-TSS (NM_001007581) promoter-TSS (NM_001007581) 24 NM_001007581 381406 Mm.330785 NM_001007581 ENSMUSG00000039725 Trp53rka 2810408M09Rik transformation related protein 53 regulating kinase A protein-coding unique_peak2_24_199_-0.55784099763834_7.36493569095555_2.8891219296357 chr11 102430322 102431370 + 2.8891219296357 NA intron (NM_008175, intron 1 of 12) intron (NM_008175, intron 1 of 12) 524 NM_008175 14824 Mm.1568 NM_008175 ENSMUSG00000034708 Grn Pgrn|epithelin granulin protein-coding common_peak2_30_248_-0.493319727333774_7.71334206840119_2.88876787241502 chr16 11284612 11286182 + 2.88876787241502 NA Intergenic ID4|SINE|ID -28412 NM_011608 21935 Mm.12935 NM_011608 ENSMUSG00000022496 Tnfrsf17 BCM|BCMA|Tnfrsf13|Tnfrsf13a tumor necrosis factor receptor superfamily, member 17 protein-coding common_peak1_27_223_-0.520790172039678_7.54695983603776_2.88655957744933-2 chr2 79254302 79254886 + 2.88655957744933 NA promoter-TSS (NM_010576) promoter-TSS (NM_010576) -832 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_27_223_-0.520790172039678_7.54695983603776_2.88655957744933 chr2 3332784 3333287 + 2.88655957744933 NA promoter-TSS (NM_001013376) promoter-TSS (NM_001013376) -407 NM_001013376 227522 Mm.293948 NM_001013376 ENSMUSG00000049950 Rpp38 C330006A15Rik ribonuclease P/MRP 38 subunit protein-coding common_peak2_27_223_-0.520790172039678_7.54695983603776_2.88655957744933-2 chr15 36363021 36364180 + 2.88655957744933 NA Intergenic (CAAA)n|Simple_repeat|Simple_repeat -80453 NM_013923 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak2_27_223_-0.520790172039678_7.54695983603776_2.88655957744933 chr13 12394508 12395956 + 2.88655957744933 NA promoter-TSS (NM_144835) promoter-TSS (NM_144835) -143 NM_144835 217995 Mm.171186 NM_144835 ENSMUSG00000050244 Heatr1 AA517551|B130016L12Rik|BC019693 HEAT repeat containing 1 protein-coding unique_peak2_27_223_-0.520790172039678_7.54695983603776_2.88655957744933 chrX 106219115 106220227 + 2.88655957744933 NA exon (NM_001167988, exon 2 of 8) exon (NM_001167988, exon 2 of 8) 171 NM_001001176 407786 Mm.19440 NM_001001176 ENSMUSG00000047242 Taf9b BC066223|Taf9l TATA-box binding protein associated factor 9B protein-coding common_peak1_27_223_-0.520790172039678_7.54695983603776_2.88655957744933-3 chr5 93110219 93110641 + 2.88655957744933 NA intron (NM_001310669, intron 1 of 10) intron (NM_001310669, intron 1 of 10) 17014 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_34_141_0.531698595018852_7.41559641701411_2.88651471393897-2 chr2 128123950 128124661 + 2.88651471393897 NA TTS (NM_028765) TTS (NM_028765) -1733 NM_207681 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak1_34_141_0.531698595018852_7.41559641701411_2.88651471393897 chr16 4557934 4558663 + 2.88651471393897 NA intron (NM_031182, intron 1 of 6) intron (NM_031182, intron 1 of 6) 1422 NM_031182 83383 Mm.273210 NM_031182 ENSMUSG00000005718 Tfap4 AI642933|AP-4|D930048N17Rik|Tcfap4|bHLHc41 transcription factor AP4 protein-coding common_peak2_314_3315_-0.125513544665649_11.6324715191629_2.88590632047856 chr1 52797783 52803230 + 2.88590632047856 NA intron (NM_008384, intron 1 of 5) intron (NM_008384, intron 1 of 5) 17182 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding common_peak1_70_387_0.33324670365989_8.76653619401707_2.88588476784162 chr2 13271018 13272070 + 2.88588476784162 NA promoter-TSS (NM_009105) promoter-TSS (NM_009105) -129 NM_009105 20163 Mm.905 NM_009105 ENSMUSG00000026727 Rsu1 RsuI|rsp-1 Ras suppressor protein 1 protein-coding common_peak1_70_387_0.33324670365989_8.76653619401707_2.88588476784162-2 chr5 114813368 114814016 + 2.88588476784162 NA intron (NR_027818, intron 1 of 1) intron (NR_027818, intron 1 of 1) 284 NR_027818 66236 Mm.268546 NR_027817 ENSMUSG00000072694 1500011B03Rik AI415201|AV141149|AW556386 RIKEN cDNA 1500011B03 gene ncRNA common_peak2_80_698_-0.282806562382557_9.30774536418416_2.88575231231272 chr6 127991047 127993871 + 2.88575231231272 NA intron (NM_175414, intron 3 of 8) intron (NM_175414, intron 3 of 8) 104837 NM_026743 68498 Mm.174368 NM_026743 ENSMUSG00000030351 Tspan11 1110014F12Rik|AU067806 tetraspanin 11 protein-coding common_peak2_69_379_0.338202417378943_8.73895681702042_2.88572305816799 chr11 115338455 115340068 + 2.88572305816799 NA intron (NM_027132, intron 1 of 6) intron (NM_027132, intron 1 of 6) 4527 NM_027132 69602 Mm.101844 NM_027132 ENSMUSG00000018862 Otop3 2310011E08Rik otopetrin 3 protein-coding common_peak1_40_332_-0.417935102005836_8.17041081606834_2.88460577423332 chr10 115251585 115252298 + 2.88460577423332 NA promoter-TSS (NM_025706) promoter-TSS (NM_025706) -448 NM_025706 66687 Mm.22252 NM_025706 ENSMUSG00000020130 Tbc1d15 4432405K22Rik|AU022358|AU023730|AW557774|Ly6dl|Rab7-GAP TBC1 domain family, member 15 protein-coding common_peak1_49_411_-0.373873023860478_8.49956401525298_2.88434163701668 chr17 57274762 57275708 + 2.88434163701668 NA Intergenic CpG -3865 NM_001163816 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding common_peak2_49_411_-0.373873023860478_8.49956401525298_2.88434163701668 chr14 103653452 103654704 + 2.88434163701668 NA intron (NM_198014, intron 1 of 6) intron (NM_198014, intron 1 of 6) 3835 NM_198014 105439 Mm.27548 NM_198014 ENSMUSG00000055717 Slain1 9630044O09Rik|AA675320|AW742596 SLAIN motif family, member 1 protein-coding common_peak2_48_230_0.425127195494627_8.06431263916337_2.88412472248172 chr3 137817268 137818776 + 2.88412472248172 NA Intergenic Intergenic -46465 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak1_211_1665_0.166793702450276_10.7855695365907_2.88398179871827 chr19 53312391 53314292 + 2.88398179871827 NA intron (NM_001008542, intron 1 of 5) CpG 2835 NM_001008542 17859 Mm.2154 NM_010847 ENSMUSG00000025025 Mxi1 ENSMUSG00000067085|Gm10197|Mad2|bHLHc11 MAX interactor 1, dimerization protein protein-coding common_peak2_134_921_0.221690213288577_9.95946804707363_2.88368806786449 chr8 114814629 114817216 + 2.88368806786449 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 376270 NM_019573 80707 Mm.440420 NM_019573 ENSMUSG00000004637 Wwox 5330426P09Rik|9030416C10Rik|WOX1 WW domain-containing oxidoreductase protein-coding common_peak2_118_1075_-0.224389992316979_9.95926736639813_2.88368806786409 chr11 35768703 35770550 + 2.88368806786409 NA 5' UTR (NM_145962, exon 1 of 7) 5' UTR (NM_145962, exon 1 of 7) 131 NM_145962 211347 Mm.255044 NM_145962 ENSMUSG00000018846 Pank3 - pantothenate kinase 3 protein-coding common_peak2_99_883_-0.248662744882337_9.66357118695026_2.88284961781885 chr13 74207959 74209540 + 2.88284961781885 NA promoter-TSS (NM_177333) promoter-TSS (NM_177333) -49 NM_177333 211446 Mm.261859 NM_177333 ENSMUSG00000034152 Exoc3 2810050O03Rik|E430013E20Rik|Sec6|Sec6l1 exocyst complex component 3 protein-coding common_peak2_99_883_-0.248662744882337_9.66357118695026_2.88284961781885-2 chr16 11422996 11426300 + 2.88284961781885 NA intron (NM_001290148, intron 4 of 13) intron (NM_001290148, intron 4 of 13) 19000 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak1_13_113_-0.772937575333171_6.44642122649816_2.8822541911673 chr16 78502712 78503090 + 2.8822541911673 NA Intergenic Intergenic -57415 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA unique_peak2_13_113_-0.772937575333171_6.44642122649816_2.8822541911673-2 chr19 20393571 20394348 + 2.8822541911673 NA Intergenic Intergenic -3288 NM_010730 16952 Mm.248360 NM_010730 ENSMUSG00000024659 Anxa1 Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1 annexin A1 protein-coding unique_peak2_13_113_-0.772937575333171_6.44642122649816_2.8822541911673 chr15 81802537 81803253 + 2.8822541911673 NA intron (NM_153484, intron 1 of 3) intron (NM_153484, intron 1 of 3) 222 NM_153484 21685 Mm.270278 NM_017376 ENSMUSG00000022389 Tef 2310028D20Rik thyrotroph embryonic factor protein-coding common_peak2_238_1945_0.154808519311466_11.0037002544368_2.88210579695821 chr10 128302415 128304515 + 2.88210579695821 NA 5' UTR (NM_001252327, exon 1 of 26) 5' UTR (NM_001252327, exon 1 of 26) 130 NM_001252326 103135 Mm.244183 NM_133992 ENSMUSG00000005682 Pan2 1200014O24Rik|AI047843|AW742773|Usp52|mKIAA0710 PAN2 poly(A) specific ribonuclease subunit protein-coding common_peak2_66_565_-0.314114542682159_8.9876009714908_2.88200887273779-2 chr1 153616568 153618475 + 2.88200887273779 NA Intergenic Intergenic -35516 NM_026380 67792 Mm.379143 NM_026380 ENSMUSG00000042671 Rgs8 6530413N01Rik regulator of G-protein signaling 8 protein-coding common_peak2_66_565_-0.314114542682159_8.9876009714908_2.88200887273779 chr1 37864329 37865933 + 2.88200887273779 NA promoter-TSS (NM_207228) promoter-TSS (NM_207228) -49 NM_207228 211484 Mm.332756 NM_207228 ENSMUSG00000060771 Tsga10 4933432N21Rik|AI843383|Gm217|Mtsga10 testis specific 10 protein-coding common_peak2_35_289_-0.448611416955911_7.95560338153698_2.88103623736622 chr13 55369658 55370500 + 2.88103623736622 NA intron (NM_016758, intron 1 of 14) intron (NM_016758, intron 1 of 14) 347 NM_016758 51791 Mm.1426 NM_016758 ENSMUSG00000052087 Rgs14 RPIP1 regulator of G-protein signaling 14 protein-coding common_peak2_35_289_-0.448611416955911_7.95560338153698_2.88103623736622-2 chr14 61359667 61361115 + 2.88103623736622 NA promoter-TSS (NM_026598) promoter-TSS (NM_026598) 54 NM_026598 68177 Mm.22758 NM_026598 ENSMUSG00000021928 Ebpl 5730442K12Rik|EBRP emopamil binding protein-like protein-coding common_peak2_80_464_0.305255176997484_9.01371449449414_2.88099525263529 chr19 10948291 10950032 + 2.88099525263529 NA exon (NM_023731, exon 1 of 4) exon (NM_023731, exon 1 of 4) 105 NM_023731 108673 Mm.294908 NM_023731 ENSMUSG00000024732 Ccdc86 4933411H20Rik|6720480F16Rik|D19Ertd678e coiled-coil domain containing 86 protein-coding common_peak1_80_464_0.305255176997484_9.01371449449414_2.88099525263529 chr13 37642638 37643480 + 2.88099525263529 NA Intergenic MER5A|DNA|hAT-Charlie -182979 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_30_118_0.571864441426363_7.18074998402112_2.88072901114291 chr12 116405403 116405945 + 2.88072901114291 NA promoter-TSS (NR_028421) promoter-TSS (NR_028421) 272 NM_133762 76044 Mm.491196 NM_133762 ENSMUSG00000042029 Ncapg2 5830426I05Rik|Luzp5|Mtb|mCAP-G2 non-SMC condensin II complex, subunit G2 protein-coding common_peak1_30_118_0.571864441426363_7.18074998402112_2.88072901114291-3 chr9 41141239 41141987 + 2.88072901114291 NA intron (NM_176860, intron 1 of 13) B1_Mur4|SINE|Alu 15881 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak1_30_118_0.571864441426363_7.18074998402112_2.88072901114291-2 chr13 48929768 48930309 + 2.88072901114291 NA intron (NM_001033268, intron 5 of 17) intron (NM_001033268, intron 5 of 17) 37790 NM_001033268 218236 Mm.426571 NM_001033268 ENSMUSG00000038014 Fam120a C9orf10|Ossa family with sequence similarity 120, member A protein-coding common_peak2_68_372_0.339563499991558_8.71281357025101_2.87991837536632 chr6 147090775 147092272 + 2.87991837536632 NA 5' UTR (NM_001081237, exon 1 of 3) 5' UTR (NM_001081237, exon 1 of 3) 448 NM_001081237 232539 Mm.491206 NM_001081237 ENSMUSG00000040102 Klhl42 A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340 kelch-like 42 protein-coding common_peak1_24_85_0.659750437434286_6.75613997341924_2.87986677705882 chr16 52055135 52055659 + 2.87986677705882 NA intron (NM_001033238, intron 3 of 17) MLT1C|LTR|ERVL-MaLR 23848 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding unique_peak2_16_136_-0.694495821986354_6.75078417196735_2.8798667770588 chr11 4246715 4247920 + 2.8798667770588 NA Intergenic Intergenic -10251 NM_008501 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_65_556_-0.317601258492795_8.96273288809363_2.87832678675699 chr1 143702057 143702923 + 2.87832678675699 NA intron (NM_145991, intron 1 of 16) intron (NM_145991, intron 1 of 16) 403 NM_145991 214498 Mm.156727 NM_145991 ENSMUSG00000026361 Cdc73 8430414L16Rik|C130030P16Rik|C81219|Hrpt2 cell division cycle 73, Paf1/RNA polymerase II complex component protein-coding common_peak1_372_3448_0.116829610500748_11.8103772187112_2.87753779588336 chr9 119980714 119983823 + 2.87753779588336 NA intron (NM_153287, intron 1 of 4) L2a|LINE|L2 2390 NM_153287 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak1_53_446_-0.355311143157367_8.62647544960463_2.87743026100415 chr14 105287561 105288401 + 2.87743026100415 NA intron (NM_001190989, intron 2 of 7) B1F|SINE|Alu 29308 NM_001190989 76273 Mm.290669 NM_029561 ENSMUSG00000053253 Ndfip2 0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165 Nedd4 family interacting protein 2 protein-coding common_peak1_53_446_-0.355311143157367_8.62647544960463_2.87743026100415-2 chr17 56626262 56627128 + 2.87743026100415 NA exon (NM_028782, exon 1 of 18) exon (NM_028782, exon 1 of 18) 208 NM_028782 74142 Mm.329136 NM_028782 ENSMUSG00000041168 Lonp1 1200017E13Rik|LON|Prss15 lon peptidase 1, mitochondrial protein-coding common_peak1_49_237_0.417809740014797_8.10372263331534_2.87725411553263 chr2 27677225 27678029 + 2.87725411553263 NA intron (NM_011305, intron 1 of 9) CpG 426 NM_011305 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_27_101_0.61413940804643_6.97949504599471_2.87682228050736 chr1 86587083 86587511 + 2.87682228050736 NA intron (NM_172974, intron 1 of 6) CpG 197 NM_172974 26895 Mm.12973 NM_172974 ENSMUSG00000026240 Cops7b D1Wsu66e|E130114M23 COP9 signalosome subunit 7B protein-coding common_peak2_27_101_0.61413940804643_6.97949504599471_2.87682228050736 chr4 8394417 8395413 + 2.87682228050736 NA Intergenic MMVL30-int|LTR|ERV1 -140729 NM_021518 59021 Mm.397471 NM_021518 ENSMUSG00000047187 Rab2a 9330148M11Rik|C80220|Rab2 RAB2A, member RAS oncogene family protein-coding common_peak1_27_101_0.61413940804643_6.97949504599471_2.87682228050736-2 chr18 35854056 35854558 + 2.87682228050736 NA intron (NM_133687, intron 1 of 2) intron (NM_133687, intron 1 of 2) 24489 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak2_27_101_0.61413940804643_6.97949504599471_2.87682228050736-2 chr9 21318519 21319415 + 2.87682228050736 NA Intergenic BC1_Mm|scRNA|scRNA -1752 NM_001199186 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding common_peak1_40_178_0.477627487801169_7.72262952116484_2.87653334632012-2 chrX 144275826 144276652 + 2.87653334632012 NA Intergenic MMVL30-int|LTR|ERV1 -41727 NR_037145 67574 Mm.249084 NM_026247 ENSMUSG00000041718 Alg13 2810046O15Rik|4833435D08Rik|Glt28d1|MDS031|OTTMUSG00000018917 asparagine-linked glycosylation 13 protein-coding common_peak2_40_178_0.477627487801169_7.72262952116484_2.87653334632012 chr6 116337863 116338701 + 2.87653334632012 NA 5' UTR (NM_027920, exon 1 of 7) 5' UTR (NM_027920, exon 1 of 7) 260 NM_027920 71779 Mm.27064 NM_027920 ENSMUSG00000025702 March8 1300017E09Rik|MARCH-VIII|Mir membrane-associated ring finger (C3HC4) 8 protein-coding common_peak1_40_178_0.477627487801169_7.72262952116484_2.87653334632012 chr11 30194261 30195013 + 2.87653334632012 NA intron (NM_175836, intron 1 of 34) intron (NM_175836, intron 1 of 34) 3620 NM_009260 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak1_51_429_-0.366159293762172_8.56511320270837_2.87619249001716-2 chr19 41911970 41912730 + 2.87619249001716 NA intron (NM_023418, intron 1 of 3) CpG 479 NM_023418 18648 Mm.16783 NM_023418 ENSMUSG00000011752 Pgam1 2310050F24Rik|Pgam-1 phosphoglycerate mutase 1 protein-coding common_peak1_51_429_-0.366159293762172_8.56511320270837_2.87619249001716 chr17 33951035 33952120 + 2.87619249001716 NA promoter-TSS (NM_019420) promoter-TSS (NM_019420) -89 NM_019420 54218 Mm.11132 NM_019420 ENSMUSG00000067370 B3galt4 Gal-T2|Galt2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 protein-coding common_peak2_108_973_-0.236035726552705_9.80976009880599_2.87536298594099 chr4 32127102 32129308 + 2.87536298594099 NA Intergenic Lx6|LINE|L1 164098 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_64_547_-0.321117562627631_8.93747330164671_2.874959478993 chr6 40891212 40892118 + 2.874959478993 NA intron (NR_035473, intron 2 of 3) intron (NR_035473, intron 2 of 3) -4171 NM_139296 194357 Mm.207087 NM_139296 ENSMUSG00000029885 Moxd2 Dbhl1 monooxygenase, DBH-like 2 protein-coding common_peak2_64_547_-0.321117562627631_8.93747330164671_2.874959478993 chr3 89089002 89090909 + 2.874959478993 NA promoter-TSS (NM_001083808) promoter-TSS (NM_001083808) 76 NM_001083808 72296 Mm.27687 NM_028188 ENSMUSG00000041263 Rusc1 2210403N08Rik|AA408288|NESCA RUN and SH3 domain containing 1 protein-coding common_peak1_18_151_-0.647563310046695_6.92414585842024_2.87482934052396 chr1 85679496 85679964 + 2.87482934052396 NA intron (NM_001313713, intron 10 of 15) intron (NM_001313713, intron 10 of 15) 29742 NM_001313714 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding common_peak2_55_464_-0.347909844791113_8.68713198359984_2.87442907900554 chr13 45412807 45414813 + 2.87442907900554 NA Intergenic ORR1E|LTR|ERVL-MaLR 24068 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak2_55_464_-0.347909844791113_8.68713198359984_2.87442907900554-2 chr13 74061647 74062779 + 2.87442907900554 NA promoter-TSS (NM_028959) promoter-TSS (NM_028959) 72 NM_028959 74470 Mm.73234 NM_028959 ENSMUSG00000021572 Cep72 2610029E11Rik|4933440J22Rik centrosomal protein 72 protein-coding common_peak2_242_1988_0.15264903831242_11.03415207999_2.87392758740254 chr8 105169867 105172276 + 2.87392758740254 NA intron (NM_022309, intron 1 of 5) CpG 397 NM_001161458 12400 Mm.2018 NM_022309 ENSMUSG00000031885 Cbfb AI893578|PEA2|PEBP2b|Pebp2|Pebpb2 core binding factor beta protein-coding common_peak1_57_482_-0.340603753136849_8.74557750226735_2.87368771499049 chr5 64861534 64862507 + 2.87368771499049 NA Intergenic Intergenic 58497 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_153_1443_-0.192521174927748_10.3995944394233_2.87313712342013 chr5 3647064 3648056 + 2.87313712342013 NA exon (NM_026033, exon 1 of 5) exon (NM_026033, exon 1 of 5) 376 NM_026033 67210 Mm.178424 NM_026033 ENSMUSG00000007415 Gatad1 2310031E19Rik|2810047M21Rik|8430439A17Rik|9130430G15Rik|B330017N08Rik|ENSMUSG00000073241|Odag GATA zinc finger domain containing 1 protein-coding common_peak1_113_736_0.245590221641461_9.6483159199158_2.87272607826312 chr11 55077278 55078870 + 2.87272607826312 NA promoter-TSS (NM_177471) promoter-TSS (NM_177471) 57 NM_177471 52570 Mm.22361 NM_177471 ENSMUSG00000049588 Ccdc69 2210021E03Rik|D11Ertd461e coiled-coil domain containing 69 protein-coding common_peak2_143_1336_-0.200261454661618_10.2846530227625_2.87269463527434 chr10 128336762 128339064 + 2.87269463527434 NA promoter-TSS (NM_026444) promoter-TSS (NM_026444) 81 NM_026444 12974 Mm.58836 NM_026444 ENSMUSG00000005683 Cs 2610511A05Rik|9030605P22Rik|Ahl4|BB234005|Cis citrate synthase protein-coding common_peak1_77_669_-0.288461524550918_9.24378652306968_2.87245745859556 chr2 101756796 101757652 + 2.87245745859556 NA intron (NM_175181, intron 4 of 8) MIR|SINE|MIR 40483 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_61_519_-0.329073297107792_8.85783116447456_2.87244228207548 chr5 34636416 34637321 + 2.87244228207548 NA intron (NM_026660, intron 1 of 12) intron (NM_026660, intron 1 of 12) 246 NM_026660 68294 Mm.34564 NM_026660 ENSMUSG00000001082 Mfsd10 0610009O03Rik|Tetran major facilitator superfamily domain containing 10 protein-coding common_peak1_22_183_-0.585101151963503_7.23101138007526_2.8723302931933-3 chr2 150646663 150647218 + 2.8723302931933 NA intron (NM_080575, intron 2 of 13) intron (NM_080575, intron 2 of 13) -20554 NR_040331 109344 Mm.440012 NR_040331 ENSMUSG00000087406 E130215H24Rik - RIKEN cDNA E130215H24 gene ncRNA common_peak1_22_183_-0.585101151963503_7.23101138007526_2.8723302931933-2 chr2 150309527 150309948 + 2.8723302931933 NA Intergenic MT2B1|LTR|ERVL 52220 NM_001142410 100216455 Mm.484816 NM_001142410 ENSMUSG00000079008 Gm14124 EG640962|ENSMUSG00000074735|Gm10749|OTTMUSG00000015734 predicted gene 14124 protein-coding common_peak1_22_183_-0.585101151963503_7.23101138007526_2.8723302931933 chr10 67188608 67189241 + 2.8723302931933 NA intron (NM_001242396, intron 1 of 24) intron (NM_001242396, intron 1 of 24) 3174 NM_001242396 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding unique_peak2_22_183_-0.585101151963503_7.23101138007526_2.8723302931933 chr4 145021651 145023364 + 2.8723302931933 NA intron (NM_001276465, intron 65 of 69) intron (NM_001276465, intron 65 of 69) 129370 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_22_183_-0.585101151963503_7.23101138007526_2.8723302931933-4 chrX 101333041 101333546 + 2.8723302931933 NA Intergenic Intergenic 34114 NM_172932 245537 Mm.121508 NM_172932 ENSMUSG00000031302 Nlgn3 A230085M13Rik|HNL3|NL3 neuroligin 3 protein-coding common_peak1_217_2155_-0.155786916036513_10.9962480047342_2.87193475360435 chr2 35108592 35110872 + 2.87193475360435 NA intron (NM_012018, intron 1 of 43) CpG 240 NM_012018 26920 Mm.231332 NM_012018 ENSMUSG00000057110 Cntrl 6720467O09Rik|AA968343|Cep1|Cep110|IB3/5|Ma2a8|b2b1468.1Clo|b2b1468Clo centriolin protein-coding common_peak2_52_257_0.404514510019858_8.21348451043318_2.87171531023961 chr5 92374604 92376022 + 2.87171531023961 NA intron (NM_001310664, intron 2 of 10) B1_Mur3|SINE|Alu -12017 NR_038116 56066 Mm.131723 NM_019494 ENSMUSG00000060183 Cxcl11 Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1 chemokine (C-X-C motif) ligand 11 protein-coding common_peak2_50_244_0.411032838124886_8.14215435806501_2.87151503961126 chr10 108089050 108090337 + 2.87151503961126 NA Intergenic MLT1I|LTR|ERVL-MaLR -72707 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak2_108_693_0.252950382951376_9.56526704405395_2.86955771479838 chr9 41104507 41106529 + 2.86955771479838 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) 51976 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak1_108_693_0.252950382951376_9.56526704405395_2.86955771479838 chr7 111083216 111083945 + 2.86955771479838 NA promoter-TSS (NM_013507) promoter-TSS (NM_013507) -550 NM_013507 13690 Mm.185453 NM_013507 ENSMUSG00000005610 Eif4g2 DAP-5|E130105L11Rik|Nat1|Natm1|p97 eukaryotic translation initiation factor 4, gamma 2 protein-coding common_peak1_125_841_0.230545048071743_9.83294894710227_2.86931846734014 chr2 130663811 130664868 + 2.86931846734014 NA intron (NM_029832, intron 1 of 8) CpG 306 NM_029832 77006 Mm.440063 NM_029832 ENSMUSG00000068290 Ddrgk1 1110001I20Rik|2600009E05Rik|AI326138|Ufbp1 DDRGK domain containing 1 protein-coding common_peak1_196_1916_-0.165528005042852_10.8218706191467_2.86919701609285 chr19 44247300 44249437 + 2.86919701609285 NA Intergenic CpG 45080 NM_024450 30049 Mm.480594 NM_024450 ENSMUSG00000025202 Scd3 4930513N16Rik stearoyl-coenzyme A desaturase 3 protein-coding common_peak2_53_264_0.398971328575389_8.24933421373826_2.86865716028522 chr1 173912481 173914309 + 2.86865716028522 NA promoter-TSS (NM_001301745) promoter-TSS (NM_001301745) -349 NM_001033450 381308 Mm.490248 NM_001033450 ENSMUSG00000026536 Ifi211 A730048F03|Ifi205b|Mnda|ifi-205-B interferon activated gene 211 protein-coding common_peak2_42_349_-0.405483941578378_8.24846914104314_2.86865716028512 chr7 102564863 102565653 + 2.86865716028512 NA intron (NM_009277, intron 1 of 7) intron (NM_009277, intron 1 of 7) 224 NM_001082552 20821 Mm.321227 NM_009277 ENSMUSG00000030966 Trim21 Ro52|Ssa1 tripartite motif-containing 21 protein-coding common_peak1_121_806_0.234706898955547_9.77377831275555_2.86812878385614 chr2 27474876 27476223 + 2.86812878385614 NA promoter-TSS (NM_023336) promoter-TSS (NM_023336) 124 NM_001113573 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding common_peak1_177_1326_0.185678024580351_10.4667916676604_2.86790918558146 chr15 76625068 76626742 + 2.86790918558146 NA TTS (NM_183091) TTS (NM_183091) 179 NM_025842 66914 Mm.30028 NM_025842 ENSMUSG00000059323 Vps28 1110014J03Rik|CIIA|D730005C08Rik vacuolar protein sorting 28 protein-coding common_peak1_20_167_-0.614842778980263_7.08489603328863_2.86628881278571-2 chr9 21030303 21030704 + 2.86628881278571 NA TTS (NM_023892) TTS (NM_023892) 1130 NM_023892 78369 Mm.30220 NM_023892 ENSMUSG00000001014 Icam4 1810015M19Rik|Cd242|ICAM-4 intercellular adhesion molecule 4, Landsteiner-Wiener blood group protein-coding common_peak1_20_167_-0.614842778980263_7.08489603328863_2.86628881278571 chr11 69418980 69419523 + 2.86628881278571 NA Intergenic Intergenic -5576 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak1_299_3129_-0.128572611157599_11.5476606362412_2.86603677358884 chr19 36833462 36835463 + 2.86603677358884 NA 5' UTR (NM_001163635, exon 1 of 27) 5' UTR (NM_001163635, exon 1 of 27) 230 NM_001163635 74493 Mm.249310 NM_001163635 ENSMUSG00000024811 Tnks2 5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 protein-coding common_peak2_165_1210_0.194135030660375_10.3390506650245_2.86564811752957 chr9 32486590 32491042 + 2.86564811752957 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 52636 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_135_1251_-0.206645652399377_10.1866960207329_2.86470962674121 chr1 80755309 80756915 + 2.86470962674121 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 2441 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak1_56_285_0.384627382771784_8.35218502816428_2.86430851164693 chr1 79775843 79776694 + 2.86430851164693 NA exon (NM_001081210, exon 1 of 4) exon (NM_001081210, exon 1 of 4) 250 NM_001081210 69163 Mm.238455 NM_001081210 ENSMUSG00000026248 Mrpl44 1810030E18Rik|5730593H20Rik|AI463302 mitochondrial ribosomal protein L44 protein-coding common_peak1_56_285_0.384627382771784_8.35218502816428_2.86430851164693-2 chr5 103910620 103911244 + 2.86430851164693 NA intron (NM_178741, intron 1 of 9) CpG 297 NM_178741 246293 Mm.179871 NM_178741 ENSMUSG00000029312 Klhl8 2310001P09Rik|D5Ertd431e kelch-like 8 protein-coding unique_peak2_12_105_-0.799111521108622_6.32836469400889_2.86406299923596-2 chr16 33746940 33747609 + 2.86406299923596 NA intron (NM_175256, intron 10 of 14) RSINE1|SINE|B4 -46763 NM_010739 17063 Mm.3177 NM_010739 ENSMUSG00000022824 Muc13 114/A10|14/A10|AI159736|Lrrp|Ly64|NJ-1 mucin 13, epithelial transmembrane protein-coding unique_peak2_12_105_-0.799111521108622_6.32836469400889_2.86406299923596 chr1 138129187 138129886 + 2.86406299923596 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 45590 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding unique_peak2_12_105_-0.799111521108622_6.32836469400889_2.86406299923596-3 chr7 19130925 19131662 + 2.86406299923596 NA intron (NM_175530, intron 1 of 1) intron (NM_175530, intron 1 of 1) 11434 NM_175530 243867 Mm.230830 NM_175530 ENSMUSG00000050428 Fbxo46 20D7-FC4|4932704E22Rik|Fbxo34l F-box protein 46 protein-coding common_peak2_328_3487_-0.12151712808544_11.7074257607342_2.8635884924083 chr5 34335381 34337992 + 2.8635884924083 NA promoter-TSS (NM_001304270) promoter-TSS (NM_001304270) -246 NM_001304270 19822 Mm.21281 NM_011278 ENSMUSG00000029110 Rnf4 AU018689|Gtrgeo8|SNURF ring finger protein 4 protein-coding common_peak2_106_952_-0.237361984554168_9.77765141163286_2.86228137925264 chr8 22192550 22194069 + 2.86228137925264 NA intron (NM_027338, intron 1 of 13) intron (NM_027338, intron 1 of 13) 449 NM_027338 70160 Mm.41453 NM_027338 ENSMUSG00000031479 Vps36 1700010A24Rik|2210415M20Rik|2810408E15Rik|Eap45 vacuolar protein sorting 36 protein-coding unique_peak1_13_33_0.972489597581231_5.57370764004095_2.86200135898774-2 chr3 15284215 15284614 + 2.86200135898774 NA Intergenic Intergenic 47888 NM_001076679 751864 Mm.431296 NM_001076679 ENSMUSG00000078783 Gm9733 - predicted gene 9733 protein-coding common_peak1_13_33_0.972489597581231_5.57370764004095_2.86200135898774 chr2 18916168 18916519 + 2.86200135898774 NA intron (NM_008845, intron 1 of 9) intron (NM_008845, intron 1 of 9) 81778 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding unique_peak1_13_33_0.972489597581231_5.57370764004095_2.86200135898774 chr2 176635931 176636302 + 2.86200135898774 NA intron (NM_001100415, intron 1 of 4).5 RMER17B|LTR|ERVK 195 NM_001100416 668030 Mm.289463 NM_001100416 Gm14432 OTTMUSG00000016609 predicted gene 14432 protein-coding common_peak2_131_1209_-0.210246762128365_10.1356679510978_2.86174826578412 chrX 42067305 42070041 + 2.86174826578412 NA non-coding (NR_125870, exon 1 of 6) non-coding (NR_125870, exon 1 of 6) 275 NR_125870 11798 Mm.259879 NM_009688 ENSMUSG00000025860 Xiap 1110015C02Rik|Aipa|Api3|Birc4|IAP3|ILP-1|MIHA X-linked inhibitor of apoptosis protein-coding common_peak1_131_1209_-0.210246762128365_10.1356679510978_2.86174826578412 chr11 94385621 94387247 + 2.86174826578412 NA intron (NM_029600, intron 1 of 30) intron (NM_029600, intron 1 of 30) 6542 NM_029600 76408 Mm.23942 NM_029600 ENSMUSG00000020865 Abcc3 1700019L09Rik|ABC31|MLP2|MOAT-D|MRP3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 protein-coding common_peak1_182_1375_0.182389212498158_10.5174593609512_2.86147247170274 chr6 58831204 58832888 + 2.86147247170274 NA Intergenic Intergenic -1654 NM_028705 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding common_peak1_76_433_0.315170308328588_8.91913638660877_2.86131162102148 chr1 181853046 181854023 + 2.86131162102148 NA Intergenic Intergenic -11133 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding unique_peak2_74_640_-0.294030838329075_9.1771651274542_2.86127335096059 chr1 88641592 88645178 + 2.86127335096059 NA Intergenic Intergenic 58806 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_36_298_-0.444218022986695_8.00189266270476_2.86118867718502 chr10 94828367 94829092 + 2.86118867718502 NA intron (NM_018797, intron 20 of 30) intron (NM_018797, intron 20 of 30) 115849 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding common_peak1_36_298_-0.444218022986695_8.00189266270476_2.86118867718502-2 chr7 123322346 123323030 + 2.86118867718502 NA intron (NM_001316713, intron 4 of 19) intron (NM_001316713, intron 4 of 19) 47227 NM_001122643 70497 Mm.403318 NM_144529 ENSMUSG00000030766 Arhgap17 5730403H17Rik|Nadrin|Nadrin2|Rich1|Wbp15 Rho GTPase activating protein 17 protein-coding common_peak2_138_1282_-0.20332067429708_10.2236451179411_2.86104481753261 chr9 21449164 21452942 + 2.86104481753261 NA intron (NM_007871, intron 1 of 19) intron (NM_007871, intron 1 of 19) 26145 NM_001039520 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding common_peak2_167_1594_-0.182029131294664_10.5483261430049_2.86099110384084 chr10 83335666 83338552 + 2.86099110384084 NA intron (NM_177388, intron 1 of 10) intron (NM_177388, intron 1 of 10) 708 NM_177388 338365 Mm.67073 NM_177388 ENSMUSG00000034591 Slc41a2 A230035L05Rik|SLC41A1-L1 solute carrier family 41, member 2 protein-coding common_peak2_16_46_0.848947409296534_5.97906255632591_2.86088863980773 chr7 16325943 16326337 + 2.86088863980773 NA TTS (NM_019748) TTS (NM_019748) 16557 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding common_peak1_16_46_0.848947409296534_5.97906255632591_2.86088863980773-3 chr9 118271788 118272193 + 2.86088863980773 NA Intergenic Intergenic -121794 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding common_peak1_16_46_0.848947409296534_5.97906255632591_2.86088863980773 chr19 3922829 3923238 + 2.86088863980773 NA intron (NM_026316, intron 2 of 9) intron (NM_026316, intron 2 of 9) 6683 NM_026316 67689 Mm.109341 NM_026316 ENSMUSG00000024885 Aldh3b1 1700001N19Rik|ALDH4|ALDH7 aldehyde dehydrogenase 3 family, member B1 protein-coding common_peak1_16_46_0.848947409296534_5.97906255632591_2.86088863980773-2 chr4 133704711 133705158 + 2.86088863980773 NA intron (NM_001080819, intron 4 of 19) intron (NM_001080819, intron 4 of 19) 12174 NR_106086 102465707 NR_106086 ENSMUSG00000104566 Mir7227 mmu-mir-7227 microRNA 7227 ncRNA common_peak2_60_314_0.365311432659693_8.48186373471713_2.86070857054734-2 chr9 107337704 107339153 + 2.86070857054734 NA promoter-TSS (NM_133984) promoter-TSS (NM_133984) -78 NM_133984 69536 Mm.259467 NM_133984 ENSMUSG00000032579 Hemk1 2310008M14Rik|AW049265 HemK methyltransferase family member 1 protein-coding common_peak2_60_314_0.365311432659693_8.48186373471713_2.86070857054734 chr14 67047077 67048815 + 2.86070857054734 NA intron (NM_001205188, intron 2 of 9) intron (NM_001205188, intron 2 of 9) 24525 NM_028032 71978 Mm.273997 NM_028032 ENSMUSG00000022052 Ppp2r2a 2410004D02Rik|mKIAA1541 protein phosphatase 2, regulatory subunit B, alpha protein-coding common_peak2_127_1167_-0.213734362195781_10.0829573777821_2.86036700449924 chr7 30230894 30233199 + 2.86036700449924 NA promoter-TSS (NM_027259) promoter-TSS (NM_027259) -17 NM_025548 66411 Mm.27947 NM_025548 ENSMUSG00000006095 Tbcb 2410007D12Rik|AU041393|CG22|CKAPI|Ckap1 tubulin folding cofactor B protein-coding common_peak1_91_552_0.280549756231515_9.25141054835047_2.8598116881849 chr2 90579809 90581282 + 2.8598116881849 NA exon (NM_008982, exon 1 of 24) exon (NM_008982, exon 1 of 24) 102 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_115_1044_-0.227399290082964_9.91558758192676_2.85972965890721 chr19 4185987 4187827 + 2.85972965890721 NA intron (NM_178650, intron 8 of 9) ID_B1|SINE|B4 4140 NM_178650 108995 Mm.288312 NM_178650 ENSMUSG00000040247 Tbc1d10c 1810062O14Rik|AI428527 TBC1 domain family, member 10c protein-coding common_peak2_206_1615_0.168518353648283_10.7424706595759_2.85946507553368 chr7 100606781 100608768 + 2.85946507553368 NA 5' UTR (NM_001163663, exon 1 of 8) 5' UTR (NM_001163663, exon 1 of 8) 188 NM_001163663 19346 Mm.28650 NM_024287 ENSMUSG00000030704 Rab6a 2610028L11Rik|AA419671|Rab6 RAB6A, member RAS oncogene family protein-coding common_peak1_41_185_0.464928143876824_7.77162288304644_2.85922747754537 chr2 11219996 11220808 + 2.85922747754537 NA intron (NM_008859, intron 1 of 17) B1_Mur3|SINE|Alu 48020 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_75_425_0.318879205543766_8.89414922299772_2.85844680012075 chr9 42263601 42264767 + 2.85844680012075 NA intron (NM_172769, intron 1 of 5) CpG 116 NM_172769 235293 Mm.32700 NM_172769 ENSMUSG00000032018 Sc5d A830037K02|A830073K23Rik|Sc5dl sterol-C5-desaturase protein-coding common_peak1_43_358_-0.401429979942744_8.28712504385168_2.85824654402479 chrX 107217720 107218501 + 2.85824654402479 NA Intergenic Intergenic -37768 NM_001177781 213439 Mm.383562 NM_001033251 ENSMUSG00000073008 Gpr174 Gm376|Lypsr3 G protein-coupled receptor 174 protein-coding common_peak2_58_300_0.371906728282124_8.41957304090076_2.85742755133837 chr8 53511588 53512476 + 2.85742755133837 NA intron (NM_001005847, intron 1 of 8) intron (NM_001005847, intron 1 of 8) 330 NM_001005847 11593 Mm.334535 NM_001005847 ENSMUSG00000031521 Aga AW060726 aspartylglucosaminidase protein-coding common_peak1_44_366_-0.393457615278582_8.32290744520392_2.85701122687193 chr11 83527030 83527874 + 2.85701122687193 NA intron (NM_013653, intron 2 of 2) intron (NM_013653, intron 2 of 2) 3066 NM_013653 20304 Mm.284248 NM_013653 ENSMUSG00000035042 Ccl5 MuRantes|RANTES|SISd|Scya5|TCP228 chemokine (C-C motif) ligand 5 protein-coding common_peak1_111_719_0.247936276060964_9.61582123436015_2.85590154037643 chr4 21727057 21728294 + 2.85590154037643 NA promoter-TSS (NM_001290422) promoter-TSS (NM_001290422) -26 NM_001290422 51813 Mm.278584 NM_016746 ENSMUSG00000028252 Ccnc AI451004|AU020987|CG1C cyclin C protein-coding common_peak2_31_124_0.557081289649437_7.24432492948681_2.85541637190533 chr3 79202331 79203148 + 2.85541637190533 NA Intergenic Intergenic -10180 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak1_32_264_-0.472528601789683_7.81358424855572_2.85530238174062 chr8 122281503 122281991 + 2.85530238174062 NA promoter-TSS (NM_009569) promoter-TSS (NM_009569) -394 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_42_191_0.460764669532795_7.81534483548755_2.85530238174062 chr16 50736168 50736899 + 2.85530238174062 NA Intergenic Intergenic -3760 NR_028300 68190 Mm.139089 NR_028300 Dubr 5330426P16Rik|Dum Dppa2 upstream binding RNA ncRNA unique_peak2_32_264_-0.472528601789683_7.81358424855572_2.85530238174062 chr2 140041868 140043431 + 2.85530238174062 NA intron (NM_175225, intron 3 of 13) RLTR19|LTR|ERVK 24156 NM_001159640 75812 Mm.293449 NM_175225 ENSMUSG00000039033 Tasp1 4930485D02Rik|AW986064 taspase, threonine aspartase 1 protein-coding common_peak2_187_1425_0.178597443354843_10.5670569881213_2.85506900959821 chr3 30862940 30865658 + 2.85506900959821 NA intron (NM_001286994, intron 1 of 3) MTD|LTR|ERVL-MaLR 8349 NM_001286994 71862 Mm.272019 NM_027965 ENSMUSG00000037661 Gpr160 1700025D19Rik|GPCR150 G protein-coupled receptor 160 protein-coding common_peak1_11_97_-0.827546687209469_6.20093650051047_2.85417011499289 chrX 101430278 101430604 + 2.85417011499289 NA intron (NM_001252518, intron 1 of 11) intron (NM_001252518, intron 1 of 11) 790 NM_001252518 53610 Mm.280069 NM_023144 ENSMUSG00000031311 Nono AA407051|AV149256|NRB54|P54NRB|nonA non-POU-domain-containing, octamer binding protein protein-coding common_peak1_18_55_0.793009281339287_6.20385956272725_2.85417011499287-2 chr4 101223241 101223661 + 2.85417011499287 NA intron (NM_146145, intron 1 of 24) URR1A|DNA|hAT-Charlie 41831 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_18_55_0.793009281339287_6.20385956272725_2.85417011499287 chr4 88031182 88031595 + 2.85417011499287 NA intron (NM_027326, intron 2 of 10) intron (NM_027326, intron 2 of 10) 2019 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak2_106_676_0.255958395780777_9.53099122146538_2.85398052399933 chr5 118403178 118405759 + 2.85398052399933 NA Intergenic MLT1F1|LTR|ERVL-MaLR -156251 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_22_75_0.690533290649925_6.59319415876855_2.85318492677255-2 chr11 51832419 51833008 + 2.85318492677255 NA intron (NM_199299, intron 4 of 11) intron (NM_199299, intron 4 of 11) 24768 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak1_22_75_0.690533290649925_6.59319415876855_2.85318492677255 chr1 179668356 179668735 + 2.85318492677255 NA exon (NM_178653, exon 1 of 12) exon (NM_178653, exon 1 of 12) 314 NM_178653 109232 Mm.136458 NM_178653 ENSMUSG00000038936 Sccpdh AW214504|C330023F11Rik saccharopine dehydrogenase (putative) protein-coding common_peak1_22_75_0.690533290649925_6.59319415876855_2.85318492677255-3 chr15 86087817 86088288 + 2.85318492677255 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 29325 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_90_544_0.282232623055759_9.23122873119217_2.85283052276311 chr4 129792801 129793945 + 2.85283052276311 NA Intergenic B4A|SINE|B4 -27106 NM_008974 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding common_peak2_83_488_0.297008611218978_9.08219496056172_2.85176503067001 chr19 28963457 28964907 + 2.85176503067001 NA promoter-TSS (NM_198651) promoter-TSS (NM_198651) -28 NM_198651 381218 Mm.280653 NM_198651 ENSMUSG00000064202 4430402I18Rik AW122618|Spata6l RIKEN cDNA 4430402I18 gene protein-coding common_peak1_118_1074_-0.223048574237179_9.95859665735823_2.85150339562265 chr12 54738349 54739380 + 2.85150339562265 NA Intergenic CT-rich|Low_complexity|Low_complexity -42999 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak2_265_2235_0.143808151005526_11.198608548346_2.85085941073467 chr1 54879723 54885431 + 2.85085941073467 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 43810 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_23_190_-0.563653359943654_7.29560214806392_2.84962752687377 chrX 167202045 167202586 + 2.84962752687377 NA Intergenic (TTTG)n|Simple_repeat|Simple_repeat 6903 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak2_23_190_-0.563653359943654_7.29560214806392_2.84962752687377 chr12 59206378 59207613 + 2.84962752687377 NA intron (NM_001033156, intron 1 of 3) intron (NM_001033156, intron 1 of 3) 12488 NM_001033156 70611 Mm.311026 NM_001033156 ENSMUSG00000035329 Fbxo33 5730501N20Rik|AI642135 F-box protein 33 protein-coding common_peak2_450_4394_0.10317722816251_12.153236064112_2.84895325214895 chr18 73571279 73575094 + 2.84895325214895 NA exon (NM_001039214, exon 1 of 2) exon (NM_001039214, exon 1 of 2) 481 NM_001039214 240396 Mm.24131 NM_001039214 ENSMUSG00000037253 Mex3c A130001D14Rik|BC035207|BM-013|Rkhd2 mex3 RNA binding family member C protein-coding common_peak2_45_375_-0.389515736397772_8.35983098347875_2.84872787668851 chr5 8621902 8623449 + 2.84872787668851 NA 5' UTR (NM_198620, exon 1 of 10) 5' UTR (NM_198620, exon 1 of 10) 277 NM_198620 242819 Mm.332192 NM_198620 ENSMUSG00000040570 Rundc3b Gm440 RUN domain containing 3B protein-coding common_peak2_73_410_0.323401378716083_8.84469527303973_2.84826900046754 chr11 31671302 31672507 + 2.84826900046754 NA promoter-TSS (NM_001024919) promoter-TSS (NM_001024919) -42 NM_001024919 69556 Mm.34183 NM_001024919 ENSMUSG00000044502 Bod1 2310022M17Rik|BOD2.1|Fam44b biorientation of chromosomes in cell division 1 protein-coding common_peak2_151_1079_0.203385539905126_10.1785083670034_2.848087531377 chr9 56927125 56929189 + 2.848087531377 NA 5' UTR (NM_175483, exon 1 of 2) 5' UTR (NM_175483, exon 1 of 2) 214 NM_175483 235406 Mm.191459 NM_175483 ENSMUSG00000032733 Snx33 E130307J07Rik|Sh3px3 sorting nexin 33 protein-coding common_peak1_172_1278_0.188409982610912_10.4150055401871_2.84676686958684 chr10 62791596 62793249 + 2.84676686958684 NA promoter-TSS (NM_026201) promoter-TSS (NM_026201) -54 NM_026201 67500 Mm.196371 NM_026201 ENSMUSG00000020074 Ccar1 2610511G16Rik|9430036H15Rik|Carp1 cell division cycle and apoptosis regulator 1 protein-coding common_peak1_104_932_-0.24015304017494_9.74565675076429_2.84663562582953 chr7 125629733 125631673 + 2.84663562582953 NA intron (NM_021887, intron 7 of 8) intron (NM_021887, intron 7 of 8) 27274 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak2_110_711_0.248184736398297_9.59982579916555_2.84597672579664 chr4 153956458 153958173 + 2.84597672579664 NA promoter-TSS (NM_001163019) promoter-TSS (NM_001163019) 78 NM_001163019 97159 Mm.7066 NM_175287 ENSMUSG00000047613 A430005L14Rik C79672 RIKEN cDNA A430005L14 gene protein-coding common_peak1_114_745_0.243534570716593_9.66479910561353_2.84422329251564 chr8 128649197 128651287 + 2.84422329251564 NA Intergenic ID_B1|SINE|B4 -35412 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding unique_peak2_15_128_-0.714973992298086_6.65374025927421_2.84379391539815-3 chr3 108796418 108797198 + 2.84379391539815 NA intron (NM_011504, intron 17 of 18) intron (NM_011504, intron 17 of 18) 43694 NM_011504 20912 Mm.316894 NM_011504 ENSMUSG00000027882 Stxbp3 Munc-18c|Stxbp3a|Sxtbp3|Unc18-3 syntaxin binding protein 3 protein-coding common_peak1_15_128_-0.714973992298086_6.65374025927421_2.84379391539815 chr12 106010183 106010638 + 2.84379391539815 NA intron (NM_011705, intron 1 of 14) CpG 147 NM_001029843 22367 Mm.2981 NM_011705 ENSMUSG00000021115 Vrk1 51PK vaccinia related kinase 1 protein-coding unique_peak2_15_128_-0.714973992298086_6.65374025927421_2.84379391539815 chr10 77978033 77979121 + 2.84379391539815 NA promoter-TSS (NM_026431) promoter-TSS (NM_026431) -73 NM_026431 67884 Mm.297512 NM_026431 ENSMUSG00000020284 1810043G02Rik AV026620|D10Jhu13e RIKEN cDNA 1810043G02 gene protein-coding unique_peak2_15_128_-0.714973992298086_6.65374025927421_2.84379391539815-2 chr10 121368338 121369528 + 2.84379391539815 NA intron (NM_029364, intron 1 of 13) intron (NM_029364, intron 1 of 13) 3843 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding common_peak2_117_1064_-0.22449899888502_9.94438821567069_2.84249219443322 chrX 162759300 162761782 + 2.84249219443322 NA 5' UTR (NM_009031, exon 1 of 12) 5' UTR (NM_009031, exon 1 of 12) 169 NM_009031 245688 Mm.270186 NM_009031 ENSMUSG00000031353 Rbbp7 AA409861|AI173248|AU019541|BB114024|mRbAp46 retinoblastoma binding protein 7 protein-coding common_peak1_20_65_0.733080524440044_6.41093438157848_2.84218426594949-3 chr15 78498101 78498509 + 2.84218426594949 NA Intergenic Intergenic -3239 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding common_peak1_20_65_0.733080524440044_6.41093438157848_2.84218426594949-2 chr11 3932109 3932512 + 2.84218426594949 NA promoter-TSS (NM_015749) promoter-TSS (NM_015749) -232 NM_001130458 21452 Mm.20948 NM_015749 ENSMUSG00000020432 Tcn2 AW208754|Tcn-2 transcobalamin 2 protein-coding common_peak1_20_65_0.733080524440044_6.41093438157848_2.84218426594949-5 chr2 131253374 131253772 + 2.84218426594949 NA intron (NR_037281, intron 2 of 2) RLTR42-int|LTR|ERVK -8927 NM_153501 74450 Mm.101264 NM_153501 ENSMUSG00000037514 Pank2 4933409I19Rik|AI642621 pantothenate kinase 2 protein-coding unique_peak1_20_65_0.733080524440044_6.41093438157848_2.84218426594949 chr10 81268184 81268706 + 2.84218426594949 NA intron (NM_018758, intron 1 of 10) intron (NM_018758, intron 1 of 10) 273 NM_018758 57267 Mm.293931 NM_018758 ENSMUSG00000004931 Apba3 AW208791|Mint-3|X11gamma|lin-10|mint3 amyloid beta (A4) precursor protein-binding, family A, member 3 protein-coding common_peak1_20_65_0.733080524440044_6.41093438157848_2.84218426594949-4 chr19 5797721 5798243 + 2.84218426594949 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) 4689 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak1_20_65_0.733080524440044_6.41093438157848_2.84218426594949 chr10 96333649 96334077 + 2.84218426594949 NA Intergenic Intergenic 107656 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA unique_peak2_20_65_0.733080524440044_6.41093438157848_2.84218426594949 chr4 124703454 124704052 + 2.84218426594949 NA intron (NM_010213, intron 1 of 5) intron (NM_010213, intron 1 of 5) 3054 NM_010213 14201 Mm.331856 NM_010213 ENSMUSG00000032643 Fhl3 SLIM2 four and a half LIM domains 3 protein-coding common_peak1_20_65_0.733080524440044_6.41093438157848_2.84218426594949-6 chr5 36177024 36177529 + 2.84218426594949 NA intron (NM_030889, intron 2 of 26) intron (NM_030889, intron 2 of 26) -26745 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding common_peak2_20_65_0.733080524440044_6.41093438157848_2.84218426594949 chr17 86977820 86978430 + 2.84218426594949 NA intron (NM_145491, intron 2 of 4) intron (NM_145491, intron 2 of 4) 15014 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak1_26_214_-0.525985282749866_7.48520020821453_2.84211502373598-2 chr8 111536491 111536989 + 2.84211502373598 NA promoter-TSS (NM_001168622) promoter-TSS (NM_001168622) 100 NM_001168621 170737 Mm.271578 NM_133206 ENSMUSG00000033545 Znrf1 B830022L21Rik|Rnf42|Zrfp1|nin283 zinc and ring finger 1 protein-coding common_peak1_26_214_-0.525985282749866_7.48520020821453_2.84211502373598 chr8 70138711 70139259 + 2.84211502373598 NA promoter-TSS (NM_001310055) promoter-TSS (NM_001310055) 212 NM_011266 19727 Mm.161167 NM_011266 ENSMUSG00000036120 Rfxank Tvl1 regulatory factor X-associated ankyrin-containing protein protein-coding common_peak1_121_1105_-0.220003908001379_10.001133716234_2.84211045705792 chr17 87106293 87107370 + 2.84211045705792 NA promoter-TSS (NM_019654) promoter-TSS (NM_019654) -848 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding common_peak2_33_272_-0.462608568759325_7.86145285654019_2.84158429703314-2 chr3 36552015 36553328 + 2.84158429703314 NA promoter-TSS (NM_019393) promoter-TSS (NM_019393) 65 NM_019393 50911 Mm.116711 NM_019393 ENSMUSG00000027714 Exosc9 PM/Scl-75|Pmscl1|RRP45|p5|p6 exosome component 9 protein-coding common_peak2_43_198_0.449785433336658_7.86151733721198_2.84158429703314 chr11 45944198 45944983 + 2.84158429703314 NA TTS (NM_001290737) TTS (NM_001290737) 345 NM_028185 72290 Mm.249827 NM_028185 ENSMUSG00000044847 Lsm11 2210404M20Rik|AV079530 U7 snRNP-specific Sm-like protein LSM11 protein-coding common_peak1_33_272_-0.462608568759325_7.86145285654019_2.84158429703314 chr17 70924555 70925039 + 2.84158429703314 NA Intergenic Intergenic 65719 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak2_33_272_-0.462608568759325_7.86145285654019_2.84158429703314 chr11 120617129 120618353 + 2.84158429703314 NA TTS (NM_153056) TTS (NM_153056) 149 NM_024229 68671 Mm.21439 NM_024229 ENSMUSG00000025137 Pcyt2 1110033E03Rik|ET phosphate cytidylyltransferase 2, ethanolamine protein-coding common_peak1_43_198_0.449785433336658_7.86151733721198_2.84158429703314 chr13 67830809 67831498 + 2.84158429703314 NA promoter-TSS (NR_045194) promoter-TSS (NR_045194) 47 NM_001309374 102637366 Mm.121460 NM_001015506 ENSMUSG00000058246 Gm10037 EG328280|ENSMUSG00000058246|Rslcan24 predicted gene 10037 protein-coding common_peak2_28_107_0.5937758123491_7.05177540833802_2.8415562321748 chr10 96333430 96334259 + 2.8415562321748 NA Intergenic Intergenic 107637 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_46_384_-0.385583548156246_8.39592286150414_2.84150518573633 chr5 114922013 114922789 + 2.84150518573633 NA promoter-TSS (NM_145209) promoter-TSS (NM_145209) -839 NM_145209 231655 Mm.95479 NM_145209 ENSMUSG00000041827 Oasl1 7530414C13Rik|oasl9 2'-5' oligoadenylate synthetase-like 1 protein-coding common_peak2_126_851_0.227501073948208_9.84846015719994_2.84147908183493 chr8 71380939 71382878 + 2.84147908183493 NA promoter-TSS (NM_010150) promoter-TSS (NM_010150) 44 NM_010150 13864 Mm.28989 NM_010150 ENSMUSG00000002393 Nr2f6 AV090102|COUP-TF3|EAR2|Erbal2 nuclear receptor subfamily 2, group F, member 6 protein-coding common_peak2_199_1545_0.171527521770605_10.6800883648101_2.84116447384411 chr1 128590233 128593622 + 2.84116447384411 NA intron (NM_009911, intron 1 of 1) intron (NM_009911, intron 1 of 1) 372 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_29_239_-0.498234163010816_7.65777351410311_2.84088020814106 chr10 130322421 130323049 + 2.84088020814106 NA promoter-TSS (NM_183264) promoter-TSS (NM_183264) -117 NM_183264 67596 Mm.131264 NM_183264 ENSMUSG00000034833 Tespa1 5830405N20Rik|A430001F24Rik|AI450549 thymocyte expressed, positive selection associated 1 protein-coding common_peak1_29_239_-0.498234163010816_7.65777351410311_2.84088020814106-2 chr7 18840169 18840803 + 2.84088020814106 NA intron (NM_153760, intron 1 of 4) RMER10B|LTR|ERVL 520 NM_153760 243864 Mm.233503 NM_153760 ENSMUSG00000040987 Mill2 Micb MHC I like leukocyte 2 protein-coding common_peak1_72_403_0.324107543633833_8.82026525456871_2.84082132125993 chr10 80854676 80856120 + 2.84082132125993 NA promoter-TSS (NM_025349) promoter-TSS (NM_025349) 123 NM_175195 73218 Mm.3285 NM_175195 ENSMUSG00000035206 Sppl2b 3110056O03Rik|AW550292|PSL1 signal peptide peptidase like 2B protein-coding unique_peak2_44_204_0.446698538059185_7.90282936853504_2.84018061660357 chr8 35596356 35597653 + 2.84018061660357 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -7984 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_44_204_0.446698538059185_7.90282936853504_2.84018061660357 chr17 47522917 47523713 + 2.84018061660357 NA intron (NM_001081635, intron 1 of 6) MIRb|SINE|MIR 18264 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak2_44_204_0.446698538059185_7.90282936853504_2.84018061660357 chr9 78112576 78113878 + 2.84018061660357 NA promoter-TSS (NM_019987) promoter-TSS (NM_019987) -11 NM_019987 56542 Mm.288719 NM_019987 ENSMUSG00000009828 Ick 2210420N10Rik|AI848300|Mrk intestinal cell kinase protein-coding common_peak2_364_3356_0.1174677915664_11.7716907174807_2.83985873136214 chr9 21242776 21251381 + 2.83985873136214 NA intron (NM_053190, intron 1 of 2) L1Md_F2|LINE|L1 1365 NM_053190 94226 Mm.190619 NM_053190 ENSMUSG00000045087 S1pr5 Edg8|S1P5|lpB4 sphingosine-1-phosphate receptor 5 protein-coding common_peak2_66_564_-0.311563357152826_8.98632537872614_2.83770220030364 chr12 70218543 70220207 + 2.83770220030364 NA intron (NM_133198, intron 3 of 19) intron (NM_133198, intron 3 of 19) 8308 NM_133198 110095 Mm.256926 NM_133198 ENSMUSG00000021069 Pygl - liver glycogen phosphorylase protein-coding common_peak2_277_2367_0.139143726350008_11.279025228804_2.83712371260468 chr5 92488066 92492706 + 2.83712371260468 NA intron (NM_007644, intron 1 of 11) intron (NM_007644, intron 1 of 11) 15271 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding common_peak2_277_2367_0.139143726350008_11.279025228804_2.83712371260468-2 chr9 80066402 80069079 + 2.83712371260468 NA intron (NM_001311110, intron 1 of 23) CpG 837 NM_146003 215351 Mm.28232 NM_146003 ENSMUSG00000034252 Senp6 2810017C20Rik|E130319N12Rik|Susp1|mKIAA0797 SUMO/sentrin specific peptidase 6 protein-coding common_peak1_21_174_-0.591413369138378_7.15550442726314_2.83700529901623 chr19 11065212 11065695 + 2.83700529901623 NA Intergenic RMER1C|Other|Other -14887 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA unique_peak2_21_174_-0.591413369138378_7.15550442726314_2.83700529901623 chr16 91789018 91789945 + 2.83700529901623 NA intron (NM_010587, intron 4 of 38) intron (NM_010587, intron 4 of 38) 60110 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding common_peak1_19_158_-0.621748727653579_7.00200859145757_2.8367403321032 chr2 174327267 174327892 + 2.8367403321032 NA promoter-TSS (NR_003258) promoter-TSS (NR_003258) -189 NM_001310083 14683 Mm.125770 NM_010309 ENSMUSG00000027523 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus protein-coding common_peak2_155_1463_-0.189531766303469_10.4209339551323_2.83563025062706 chr9 99567767 99569680 + 2.83563025062706 NA 5' UTR (NM_028768, exon 1 of 22) 5' UTR (NM_028768, exon 1 of 22) 176 NM_001166138 74125 Mm.234823 NM_028768 ENSMUSG00000032468 Armc8 1200015K23Rik|Gid5|HSPC056 armadillo repeat containing 8 protein-coding common_peak2_120_1094_-0.220148309853087_9.98664099956199_2.83534439968712 chr1 128416150 128417721 + 2.83534439968712 NA intron (NM_145507, intron 1 of 3) CpG 481 NM_177445 226414 Mm.28693 NM_145507 ENSMUSG00000026356 Dars 5730439G15Rik aspartyl-tRNA synthetase protein-coding common_peak2_167_1593_-0.181124336632905_10.547873745674_2.83465791175291 chr8 129233305 129235392 + 2.83465791175291 NA promoter-TSS (NM_153780) promoter-TSS (NM_153780) -302 NM_153780 72139 Mm.426514 NM_153780 ENSMUSG00000071302 2610044O15Rik8 2610044O15Rik RIKEN cDNA 2610044O15 gene protein-coding common_peak2_129_878_0.223807476375848_9.89162309333133_2.83426535333948 chr5 107977919 107980918 + 2.83426535333948 NA intron (NM_026062, intron 1 of 4) B1_Mus2|SINE|Alu 7659 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak2_32_130_0.54389694612343_7.30537147459916_2.83355214604274 chr15 55850792 55851958 + 2.83355214604274 NA intron (NM_016667, intron 1 of 6) intron (NM_016667, intron 1 of 6) 55574 NM_016667 20649 Mm.309425 NM_016667 ENSMUSG00000060429 Sntb1 - syntrophin, basic 1 protein-coding common_peak1_32_130_0.54389694612343_7.30537147459916_2.83355214604274 chr9 70241919 70242518 + 2.83355214604274 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 34868 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak2_206_1616_0.167625872926417_10.7429168999369_2.83331802492963 chr14 75833165 75835966 + 2.83331802492963 NA Intergenic Intergenic 10399 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA common_peak1_245_2022_0.149909487846783_11.0572353484817_2.8328875375825 chr10 81497769 81500275 + 2.8328875375825 NA exon (NM_010102, exon 1 of 1) exon (NM_010102, exon 1 of 1) 1115 NM_010102 13611 Mm.33065 NM_010102 ENSMUSG00000044199 S1pr4 Edg6|Lpc1|S1p4 sphingosine-1-phosphate receptor 4 protein-coding common_peak2_531_6154_-0.0904182063367465_12.5423340382034_2.83277682981923 chr2 6702438 6713051 + 2.83277682981923 NA intron (NM_001310447, intron 1 of 11) intron (NM_001310447, intron 1 of 11) 13918 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_37_160_0.49605963646863_7.57894669634893_2.83256166309276 chr9 75313929 75314850 + 2.83256166309276 NA intron (NM_010313, intron 3 of 12) CpG 321 NM_138719 14697 Mm.17604 NM_010313 ENSMUSG00000032192 Gnb5 GBS|Gbeta5|flr guanine nucleotide binding protein (G protein), beta 5 protein-coding common_peak2_37_160_0.49605963646863_7.57894669634893_2.83256166309276 chr1 184533954 184535065 + 2.83256166309276 NA intron (NR_040472, intron 2 of 5) intron (NR_040472, intron 2 of 5) 23182 NR_040472 73590 Mm.82792 NR_040472 ENSMUSG00000101574 1700112H15Rik - RIKEN cDNA 1700112H15 gene ncRNA common_peak2_145_1356_-0.197273667846869_10.3075681714954_2.83213339772037 chr10 33949759 33952027 + 2.83213339772037 NA intron (NM_028287, intron 1 of 9) intron (NM_028287, intron 1 of 9) 319 NM_028287 72580 Mm.248081 NM_028287 ENSMUSG00000039531 Zufsp 2700019D07Rik zinc finger with UFM1-specific peptidase domain protein-coding common_peak1_131_1208_-0.209053959215533_10.1350715496414_2.83152186385007 chr10 79853130 79854320 + 2.83152186385007 NA promoter-TSS (NM_008956) promoter-TSS (NM_008956) -707 NM_001077363 19205 Mm.265610 NM_008956 ENSMUSG00000006498 Ptbp1 AA407203|AL033359|HNRPI|PTB-1|PTB2|PTB3|PTB4|Ptb|pPTB polypyrimidine tract binding protein 1 protein-coding common_peak2_25_91_0.631859288583919_6.83949160034897_2.83135840578541-2 chr17 5884938 5885659 + 2.83135840578541 NA intron (NM_025664, intron 1 of 17) intron (NM_025664, intron 1 of 17) 43918 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding common_peak1_25_91_0.631859288583919_6.83949160034897_2.83135840578541-2 chr7 101462679 101463220 + 2.83135840578541 NA intron (NM_001243757, intron 2 of 30) intron (NM_001243757, intron 2 of 30) 11697 NM_001243757 207728 Mm.247564 NM_001008548 ENSMUSG00000030653 Pde2a CGS-PDE|cGSPDE phosphodiesterase 2A, cGMP-stimulated protein-coding common_peak1_25_91_0.631859288583919_6.83949160034897_2.83135840578541 chr13 43208844 43209330 + 2.83135840578541 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -37586 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_17_143_-0.665239639569645_6.83730518165749_2.83135840578541-2 chr9 110659166 110659588 + 2.83135840578541 NA intron (NM_028312, intron 1 of 6) RMER4B|LTR|ERVK 2874 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_25_91_0.631859288583919_6.83949160034897_2.83135840578541 chr14 54035965 54036675 + 2.83135840578541 NA Intergenic MT2A|LTR|ERVL 217609 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak2_25_91_0.631859288583919_6.83949160034897_2.83135840578541 chr7 35318004 35318621 + 2.83135840578541 NA intron (NM_026181, intron 1 of 19) CpG 128 NM_026181 67471 Mm.358705 NM_026181 ENSMUSG00000063808 Gpatch1 1300003A17Rik|ECGP|Gpatc1 G patch domain containing 1 protein-coding unique_peak2_17_143_-0.665239639569645_6.83730518165749_2.83135840578541 chr12 92617825 92618921 + 2.83135840578541 NA Intergenic LTR82B|LTR|ERVL -769216 NM_011344 20338 Mm.250605 NM_011344 ENSMUSG00000020964 Sel1l AW493766|Sel1h|mKIAA4137 sel-1 suppressor of lin-12-like (C. elegans) protein-coding common_peak1_17_143_-0.665239639569645_6.83730518165749_2.83135840578541 chr10 121374234 121374600 + 2.83135840578541 NA exon (NM_029364, exon 3 of 14) exon (NM_029364, exon 3 of 14) 9327 NM_029364 75612 Mm.207683 NM_029364 ENSMUSG00000034707 Gns 2610016K11Rik|AU042285|C87209|G6S|N28088 glucosamine (N-acetyl)-6-sulfatase protein-coding common_peak1_117_772_0.237814112303333_9.71323166007651_2.8313163249578 chr5 121618315 121619629 + 2.8313163249578 NA promoter-TSS (NM_178799) promoter-TSS (NM_178799) -34 NM_178799 338350 Mm.482918 NM_178799 ENSMUSG00000042647 Acad12 9330129D05Rik acyl-Coenzyme A dehydrogenase family, member 12 protein-coding common_peak2_179_1347_0.182798478755485_10.4880040205596_2.83038545225744 chr9 107623598 107626398 + 2.83038545225744 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 10344 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak2_62_527_-0.322784959406672_8.88300163965512_2.82890881012 chr7 12909588 12910931 + 2.82890881012 NA Intergenic Intergenic -12052 NM_009095 20103 Mm.5291 NM_009095 ENSMUSG00000012848 Rps5 AA617411 ribosomal protein S5 protein-coding unique_peak2_9_82_-0.910517514902505_5.91978067389567_2.82877442536968-2 chrX 77798083 77798682 + 2.82877442536968 NA Intergenic Intergenic -2422 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding common_peak2_9_82_-0.910517514902505_5.91978067389567_2.82877442536968 chr10 127265627 127266208 + 2.82877442536968 NA promoter-TSS (NM_001190453) promoter-TSS (NM_001190453) -345 NM_027151 69654 Mm.167537 NM_027151 ENSMUSG00000025410 Dctn2 2310042E05Rik|C130077D06Rik|C87049|DCTN-50|GMP23-48K|RBP50|p50 dynactin 2 protein-coding unique_peak2_9_82_-0.910517514902505_5.91978067389567_2.82877442536968 chr5 24598306 24598985 + 2.82877442536968 NA exon (NM_025891, exon 2 of 13) exon (NM_025891, exon 2 of 13) 3357 NM_025891 66993 Mm.436539 NM_025891 ENSMUSG00000028949 Smarcd3 1500001J14Rik|2210409C08Rik|BAF60C SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding common_peak2_151_1420_-0.192489702286823_10.3764459880994_2.82777722244699 chr1 128613207 128616779 + 2.82777722244699 NA Intergenic Intergenic -22694 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_384_3593_0.113452434141445_11.8681009105807_2.8277161556605 chr15 96698402 96700654 + 2.8277161556605 NA 5' UTR (NM_175121, exon 1 of 16) 5' UTR (NM_175121, exon 1 of 16) 170 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding unique_peak1_12_29_1.02191833784606_5.41784976453155_2.82656563060959-2 chr9 73056923 73057242 + 2.82656563060959 NA intron (NM_023635, intron 1 of 5) B1_Mur3|SINE|Alu -7066 NM_001301232 11891 Mm.34867 NM_023635 ENSMUSG00000032202 Rab27a 2210402C08Rik|2410003M20Rik|4933437C11Rik|ash RAB27A, member RAS oncogene family protein-coding unique_peak1_12_29_1.02191833784606_5.41784976453155_2.82656563060959 chr1 107377018 107377426 + 2.82656563060959 NA intron (NM_025867, intron 6 of 7) intron (NM_025867, intron 6 of 7) 14908 NM_025867 66957 Mm.12638 NM_025867 ENSMUSG00000026327 Serpinb11 2310046M08Rik|AU015399 serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11 protein-coding unique_peak2_6_61_-1.12085618274166_5.39376821901604_2.82656563060959 chr6 10689854 10690173 + 2.82656563060959 NA Intergenic IAPEz-int|LTR|ERVK 284365 NR_033776 57866 Mm.4397 NR_033776 AA545190 - EST AA545190 ncRNA common_peak1_96_852_-0.251063567954882_9.61087014734085_2.82646405958784 chr18 36801191 36802512 + 2.82646405958784 NA promoter-TSS (NR_027885) promoter-TSS (NR_027885) 88 NR_027885 378472 Mm.482379 NR_027885 Vaultrc5 Gm22653|Mvg1 vault RNA component 5 ncRNA common_peak2_75_648_-0.288485842229536_9.19783174688437_2.82641317479188 chr11 96788562 96790131 + 2.82641317479188 NA 5' UTR (NM_007622, exon 1 of 6) 5' UTR (NM_007622, exon 1 of 6) 210 NM_007622 12412 Mm.29055 NM_007622 ENSMUSG00000018666 Cbx1 Cbx|Cbx-rs2|E430007M08Rik|HP1B|Hp1beta|M31|MOD1 chromobox 1 protein-coding common_peak1_54_454_-0.348431716700143_8.65550687673599_2.82635406308333 chr11 53852107 53852854 + 2.82635406308333 NA intron (NR_033332, intron 1 of 3) RSINE1|SINE|B4 6776 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA common_peak2_128_869_0.224990095671142_9.87736663857166_2.82557234938447 chr2 129128436 129130601 + 2.82557234938447 NA promoter-TSS (NM_025395) promoter-TSS (NM_025395) -182 NM_025395 66170 Mm.40621 NM_025395 ENSMUSG00000037938 Chchd5 1110027L01Rik|AW045710 coiled-coil-helix-coiled-coil-helix domain containing 5 protein-coding common_peak2_51_428_-0.362800281672257_8.56343369666342_2.82545158354207-2 chr9 65884412 65885770 + 2.82545158354207 NA promoter-TSS (NM_001170907) promoter-TSS (NM_001170907) 82 NM_001170907 56404 Mm.208379 NM_019797 ENSMUSG00000032386 Trip4 4930558E03Rik|ASC-1|Asc1|BB191711 thyroid hormone receptor interactor 4 protein-coding common_peak1_51_428_-0.362800281672257_8.56343369666342_2.82545158354207-2 chr10 39192243 39193001 + 2.82545158354207 NA Intergenic Intergenic -28828 NM_001127376 327743 Mm.208111 NM_001127376 ENSMUSG00000062074 Wisp3 CCN6|ENSMUSG00000062074|Gm735|WISP-3 WNT1 inducible signaling pathway protein 3 protein-coding common_peak1_51_428_-0.362800281672257_8.56343369666342_2.82545158354207 chr1 130462074 130463158 + 2.82545158354207 NA exon (NM_010016, exon 1 of 10) exon (NM_010016, exon 1 of 10) 124 NM_010016 13136 Mm.101591 NM_010016 ENSMUSG00000026399 Cd55 Daf|Daf-GPI|Daf1|GPI-DAF CD55 molecule, decay accelerating factor for complement protein-coding common_peak2_51_428_-0.362800281672257_8.56343369666342_2.82545158354207 chr11 69665320 69667025 + 2.82545158354207 NA promoter-TSS (NM_001291058) promoter-TSS (NM_001291058) -2 NR_110993 12514 Mm.15819 NM_009853 ENSMUSG00000018774 Cd68 Lamp4|Scard1|gp110 CD68 antigen protein-coding common_peak1_184_1396_0.179772932680267_10.5380027717496_2.82531405227483 chr19 41338139 41340587 + 2.82531405227483 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 45707 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_60_509_-0.329833985811886_8.82943644395291_2.82409579915761 chr11 115765180 115766090 + 2.82409579915761 NA intron (NM_028014, intron 1 of 31) CpG 202 NM_028014 71947 Mm.23168 NM_028014 ENSMUSG00000020747 Tmem94 2310067B10Rik|Kiaa0195|mKIAA0195 transmembrane protein 94 protein-coding common_peak2_60_509_-0.329833985811886_8.82943644395291_2.82409579915761-2 chr19 29417913 29419806 + 2.82409579915761 NA intron (NM_021396, intron 1 of 5) intron (NM_021396, intron 1 of 5) 7940 NM_021396 58205 Mm.116737 NM_021396 ENSMUSG00000016498 Pdcd1lg2 B7-DC|Btdc|F730015O22Rik|PD-L2 programmed cell death 1 ligand 2 protein-coding common_peak2_60_509_-0.329833985811886_8.82943644395291_2.82409579915761 chr12 33157420 33159202 + 2.82409579915761 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 10625 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_116_763_0.239649137725397_9.69725339689845_2.82378609110363 chr9 124311478 124313004 + 2.82378609110363 NA intron (NM_001243117, intron 1 of 4) intron (NM_001243117, intron 1 of 4) 453 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak1_144_1345_-0.197693793219427_10.2956157980006_2.82365335488374 chr6 119175148 119177088 + 2.82365335488374 NA intron (NM_001033379, intron 1 of 8) intron (NM_001033379, intron 1 of 8) 865 NM_001033379 319618 Mm.250197 NM_001033379 ENSMUSG00000041477 Dcp1b B930050E02Rik decapping mRNA 1B protein-coding common_peak1_38_166_0.489239157133809_7.62832387104096_2.82348497869427 chr4 43009767 43010519 + 2.82348497869427 NA 5' UTR (NM_053081, exon 1 of 14) 5' UTR (NM_053081, exon 1 of 14) 158 NM_001163233 60534 Mm.23122 NM_053081 ENSMUSG00000028453 Fancg AU041407|Xrcc9 Fanconi anemia, complementation group G protein-coding common_peak2_137_1271_-0.203675323851204_10.2110452933588_2.82147899022053 chr12 54737500 54739415 + 2.82147899022053 NA Intergenic Intergenic -42592 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak1_58_491_-0.336988100297415_8.77402045519053_2.82089023732912 chr5 141043726 141044705 + 2.82089023732912 NA Intergenic Intergenic -43619 NM_175362 108723 Mm.46187 NM_175362 ENSMUSG00000036526 Card11 0610008L17Rik|2410011D02Rik|BIMP3|CARMA1 caspase recruitment domain family, member 11 protein-coding common_peak2_46_218_0.428344027824844_7.9889590735136_2.82021978828657 chr17 71073872 71075475 + 2.82021978828657 NA intron (NM_010867, intron 14 of 37) intron (NM_010867, intron 14 of 37) 55116 NM_001083934 17929 Mm.4103 NM_010867 ENSMUSG00000024049 Myom1 D430047A17Rik myomesin 1 protein-coding common_peak2_189_1446_0.176232894929843_10.5869656539966_2.82020842886373 chr12 51842520 51845941 + 2.82020842886373 NA Intergenic Intergenic -14694 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak1_67_366_0.33712463050367_8.68819856809505_2.81952995644609 chr11 5554813 5556202 + 2.81952995644609 NA Intergenic MMVL30-int|LTR|ERV1 -13290 NM_134033 104479 Mm.210403 NM_134033 ENSMUSG00000020482 Ccdc117 1110004K02Rik|1700026O03Rik|AU018638|AU042822|AV173073|BC018601 coiled-coil domain containing 117 protein-coding unique_peak2_23_80_0.67392546520747_6.67681273548836_2.81899688018437 chr2 165770065 165770784 + 2.81899688018437 NA intron (NM_001271962, intron 15 of 15) intron (NM_001271962, intron 15 of 15) 87749 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_185_1791_-0.169925889983658_10.7223919770658_2.81814125151348 chr5 143730764 143733396 + 2.81814125151348 NA intron (NM_029749, intron 1 of 17) CpG 200 NM_029749 76800 Mm.259620 NM_029749 ENSMUSG00000051306 Usp42 2410140K03Rik|3110031A07Rik|A630018G05Rik|D5Ertd591e ubiquitin specific peptidase 42 protein-coding common_peak1_221_2199_-0.15275732986097_11.0269091434815_2.81773385677323 chr5 114379487 114381699 + 2.81773385677323 NA promoter-TSS (NM_001159941) promoter-TSS (NM_001159941) -14 NM_054093 117146 Mm.28792 NM_054093 ENSMUSG00000029577 Ube3b AI449831|AU020130 ubiquitin protein ligase E3B protein-coding unique_peak2_10_90_-0.8746092086911_6.07049003585315_2.81763046000819-4 chr7 27447885 27448564 + 2.81763046000819 NA intron (NM_144923, intron 1 of 4) CpG 246 NM_144923 233016 Mm.24021 NM_144923 ENSMUSG00000040466 Blvrb - biliverdin reductase B (flavin reductase (NADPH)) protein-coding unique_peak2_10_90_-0.8746092086911_6.07049003585315_2.81763046000819 chr17 33483691 33484610 + 2.81763046000819 NA Intergenic Intergenic -40046 NR_037707 224697 Mm.29304 NM_172619 ENSMUSG00000024299 Adamts10 9430006O18|AW045948|Adam-ts10|Adamts-10|Znmp a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10 protein-coding unique_peak2_10_90_-0.8746092086911_6.07049003585315_2.81763046000819-3 chr6 130430114 130430801 + 2.81763046000819 NA Intergenic Intergenic -43583 NM_016659 16627 Mm.24399 NM_016659 ENSMUSG00000079853 Klra1 A1|CH29-493D4.3|Klra22|Ly49a|Ly49o<129>|Ly49v killer cell lectin-like receptor, subfamily A, member 1 protein-coding unique_peak2_10_90_-0.8746092086911_6.07049003585315_2.81763046000819-2 chr4 140569714 140570393 + 2.81763046000819 NA intron (NM_001290803, intron 16 of 28) intron (NM_001290803, intron 16 of 28) 78703 NM_001112723 72754 Mm.29329 NM_172415 ENSMUSG00000040964 Arhgef10l 2810441C07Rik Rho guanine nucleotide exchange factor (GEF) 10-like protein-coding common_peak2_234_1906_0.154147545991581_10.9741629013085_2.81743586098576 chr6 125008187 125010735 + 2.81743586098576 NA promoter-TSS (NM_175557) promoter-TSS (NM_175557) -208 NM_175557 269800 Mm.108677 NM_175557 ENSMUSG00000038346 Zfp384 BB163993|C130073D16Rik|Ciz|NP|Nmp4 zinc finger protein 384 protein-coding common_peak1_27_222_-0.514335149902379_7.54373232496912_2.81626568951533-2 chr19 47067022 47067561 + 2.81626568951533 NA promoter-TSS (NM_177342) promoter-TSS (NM_177342) -457 NM_177342 226182 Mm.301522 NM_177342 ENSMUSG00000025049 Taf5 6330528C20Rik|AV117817 TATA-box binding protein associated factor 5 protein-coding common_peak1_27_222_-0.514335149902379_7.54373232496912_2.81626568951533 chr1 52652840 52653475 + 2.81626568951533 NA Intergenic Intergenic 22452 NM_001142647 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding common_peak2_48_231_0.418895241783113_8.06742861601913_2.81502967093361 chr2 173025983 173027593 + 2.81502967093361 NA intron (NM_019547, intron 3 of 3) intron (NM_019547, intron 3 of 3) 4886 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding unique_peak2_41_340_-0.409540974039318_8.20885744200451_2.8149062133368 chr11 70777412 70779372 + 2.8149062133368 NA Intergenic B1F|SINE|Alu 13945 NM_177565 193043 Mm.40966 NM_177565 ENSMUSG00000043602 Zfp3 AI854635|B230309J24|Fnp-1|Zfp-3 zinc finger protein 3 protein-coding common_peak1_229_1854_0.155975230650018_10.9351910868332_2.81482858854703 chr2 29648780 29651106 + 2.81482858854703 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 30223 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_33_136_0.532116489200001_7.36409032756053_2.8147278425038 chr9 118450565 118451762 + 2.8147278425038 NA Intergenic Intergenic 21324 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak1_24_198_-0.550609428407265_7.36131990634002_2.8147278425038 chr11 87427102 87427586 + 2.8147278425038 NA promoter-TSS (NM_001199293) promoter-TSS (NM_001199293) -247 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_24_198_-0.550609428407265_7.36131990634002_2.8147278425038-2 chr7 13053961 13054612 + 2.8147278425038 NA intron (NM_145819, intron 1 of 5) CpG 478 NM_001290452 109889 Mm.10103 NM_145819 ENSMUSG00000030380 Mzf1 Mzf-2|Mzf2|Zfp121|Zfp98|Znf42 myeloid zinc finger 1 protein-coding common_peak1_77_442_0.3083928722392_8.94535932467462_2.8146242591604 chr10 85956873 85958001 + 2.8146242591604 NA intron (NM_145422, intron 1 of 11) CpG 356 NM_145422 28088 Mm.9257 NM_145422 ENSMUSG00000001783 Rtcb AI255213|AI463255|D10Wsu52e|FAAP|HSPC117 RNA 2',3'-cyclic phosphate and 5'-OH ligase protein-coding common_peak2_136_1260_-0.20401500379336_10.1983450584315_2.81342063046503 chr7 127179812 127182367 + 2.81342063046503 NA Intergenic Intergenic 14988 NM_001285907 70233 Mm.28050 NM_027353 ENSMUSG00000042502 Cd2bp2 1500011B02Rik|2410024K20Rik|AW048183 CD2 antigen (cytoplasmic tail) binding protein 2 protein-coding unique_peak2_8_75_-0.969854462757273_5.76300028206495_2.81241087741094 chr11 70018431 70019092 + 2.81241087741094 NA 5' UTR (NM_007864, exon 1 of 20) 5' UTR (NM_007864, exon 1 of 20) 156 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs, large homolog 4 (Drosophila) protein-coding unique_peak2_8_75_-0.969854462757273_5.76300028206495_2.81241087741094-2 chr11 97808453 97809254 + 2.81241087741094 NA intron (NM_010688, intron 2 of 6) intron (NM_010688, intron 2 of 6) 9181 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak2_204_1597_0.16749715901577_10.7258002724359_2.81219790306127 chr6 72961423 72963645 + 2.81219790306127 NA Intergenic Intergenic -3786 NM_001190327 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding common_peak2_99_881_-0.245395031048426_9.66193733003331_2.81209367008023 chr11 115490857 115492853 + 2.81209367008023 NA promoter-TSS (NM_015807) promoter-TSS (NM_015807) -41 NM_015807 50773 Mm.390379 NM_015807 ENSMUSG00000020736 Nt5c Dnt|Dnt1|Umph-2|Umph2 5',3'-nucleotidase, cytosolic protein-coding unique_peak2_4_46_-1.31667924641957_4.89624922846785_2.81179020749331 chr3 154177800 154178105 + 2.81179020749331 NA intron (NM_001081263, intron 2 of 21) intron (NM_001081263, intron 2 of 21) 152608 NM_010713 16875 Mm.15530 NM_010713 ENSMUSG00000096225 Lhx8 L3|Lhx7 LIM homeobox protein 8 protein-coding unique_peak2_14_120_-0.736819115863247_6.55045367934297_2.81157683482021 chr5 134437635 134438345 + 2.81157683482021 NA intron (NM_001081469, intron 1 of 27) intron (NM_001081469, intron 1 of 27) 18272 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding common_peak1_14_120_-0.736819115863247_6.55045367934297_2.81157683482021-2 chr6 128845408 128845920 + 2.81157683482021 NA Intergenic Intergenic -19349 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding unique_peak2_14_120_-0.736819115863247_6.55045367934297_2.81157683482021-3 chrX 142694205 142695088 + 2.81157683482021 NA intron (NM_001199360, intron 2 of 6) MIR|SINE|MIR 12920 NM_001199360 209497 Mm.249648 NM_177592 ENSMUSG00000047045 Tmem164 AI316850|AI852450|AW547186|F730011B02 transmembrane protein 164 protein-coding unique_peak2_14_120_-0.736819115863247_6.55045367934297_2.81157683482021-2 chr7 75712310 75713088 + 2.81157683482021 NA intron (NM_029332, intron 17 of 36) intron (NM_029332, intron 17 of 36) -135639 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_14_120_-0.736819115863247_6.55045367934297_2.81157683482021 chr10 118461046 118461532 + 2.81157683482021 NA Intergenic L1_Mur3|LINE|L1 20243 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak2_29_113_0.575766418432962_7.12077322338122_2.81113826312955 chr5 32863671 32864274 + 2.81113826312955 NA intron (NM_177786, intron 1 of 32) intron (NM_177786, intron 1 of 32) 251 NM_001025426 277854 Mm.101524 NM_177786 ENSMUSG00000037426 Depdc5 AV016528 DEP domain containing 5 protein-coding common_peak2_76_434_0.311849950036976_8.92079656575458_2.81099468544266 chr17 31207257 31208842 + 2.81099468544266 NA promoter-TSS (NM_177823) promoter-TSS (NM_177823) -17 NM_177823 328795 Mm.387930 NM_177823 ENSMUSG00000042345 Ubash3a 5830413C03Rik|C330001M22|Sts-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing, A protein-coding common_peak1_26_96_0.622294724652467_6.91106020451336_2.81048062925623-5 chr7 29859846 29860360 + 2.81048062925623 NA intron (NM_172740, intron 1 of 3) CpG 124 NM_172740 233058 Mm.297657 NM_172740 ENSMUSG00000058402 Zfp420 B230119D13|B230312I18Rik|mszf59-1|mszf70 zinc finger protein 420 protein-coding common_peak1_26_96_0.622294724652467_6.91106020451336_2.81048062925623-3 chr12 101002650 101003320 + 2.81048062925623 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 18783 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak1_26_96_0.622294724652467_6.91106020451336_2.81048062925623 chr1 85795809 85796484 + 2.81048062925623 NA intron (NM_133781, intron 1 of 8) intron (NM_133781, intron 1 of 8) 2699 NM_133781 12283 Mm.26135 NM_133781 ENSMUSG00000036707 Cab39 AA408805|AA960512|C78372|MO25|MO25alpha calcium binding protein 39 protein-coding common_peak2_26_96_0.622294724652467_6.91106020451336_2.81048062925623 chr4 43981933 43982592 + 2.81048062925623 NA Intergenic Intergenic -1242 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding common_peak2_26_96_0.622294724652467_6.91106020451336_2.81048062925623-3 chr7 101837416 101838145 + 2.81048062925623 NA promoter-TSS (NM_001122739) promoter-TSS (NM_001122739) 44 NM_001122739 16332 Mm.476000 NM_010567 ENSMUSG00000032737 Inppl1 51C|SHIP2 inositol polyphosphate phosphatase-like 1 protein-coding common_peak2_26_96_0.622294724652467_6.91106020451336_2.81048062925623-2 chr5 64819137 64819917 + 2.81048062925623 NA intron (NM_008453, intron 2 of 5) intron (NM_008453, intron 2 of 5) 16004 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_26_96_0.622294724652467_6.91106020451336_2.81048062925623-4 chr14 77868472 77869138 + 2.81048062925623 NA intron (NM_025384, intron 1 of 5) B1_Mus1|SINE|Alu 6112 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding common_peak1_26_96_0.622294724652467_6.91106020451336_2.81048062925623-2 chr10 127144620 127145139 + 2.81048062925623 NA Intergenic Intergenic -20277 NR_045166 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding unique_peak2_26_96_0.622294724652467_6.91106020451336_2.81048062925623 chr9 119740810 119741625 + 2.81048062925623 NA Intergenic Intergenic -22185 NM_001205321 20264 Mm.247042 NM_009134 ENSMUSG00000034533 Scn10a Nav1.8|PN3|SNS sodium channel, voltage-gated, type X, alpha protein-coding common_peak1_84_497_0.29163991578441_9.10582188996029_2.81014343997905 chr4 136020856 136021746 + 2.81014343997905 NA intron (NM_013736, intron 1 of 10) CpG 348 NM_013736 27224 Mm.27663 NM_013736 ENSMUSG00000028668 Eloa 110kDa|AA408125|Tceb3|Tceb3a elongin A protein-coding unique_peak2_7_68_-1.03888350483936_5.58908270435849_2.80976127713525 chr10 77630957 77631659 + 2.80976127713525 NA intron (NM_019803, intron 3 of 5) intron (NM_019803, intron 3 of 5) 8987 NM_019803 22213 Mm.458125 NM_019803 ENSMUSG00000009293 Ube2g2 1110003O05Rik|D10Xrf369|UBC7|Ubc7p ubiquitin-conjugating enzyme E2G 2 protein-coding common_peak1_417_4622_-0.104255719524843_12.1224857874735_2.80914357983686 chr17 52160633 52164726 + 2.80914357983686 NA Intergenic Intergenic 279952 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA common_peak1_210_2072_-0.156905061970452_10.9390518701242_2.8084275036232 chr5 147075939 147078301 + 2.8084275036232 NA promoter-TSS (NM_181730) promoter-TSS (NM_181730) -226 NM_181730 20018 Mm.317557 NM_009087 ENSMUSG00000029642 Polr1d 1110003G10Rik|AC19|RPA16|Rpo1-3 polymerase (RNA) I polypeptide D protein-coding common_peak2_137_951_0.214389868125208_10.0020126973705_2.80817507706031 chrX 60403402 60404963 + 2.80817507706031 NA promoter-TSS (NM_001037863) promoter-TSS (NM_001037863) -201 NM_001037863 320940 Mm.490394 NM_001001798 ENSMUSG00000062949 Atp11c A330005H02Rik|AI315324|Ig ATPase, class VI, type 11C protein-coding common_peak1_75_426_0.315496566149113_8.89584054269505_2.80769130567291 chr6 43665683 43666607 + 2.80769130567291 NA 5' UTR (NM_013861, exon 1 of 9) 5' UTR (NM_013861, exon 1 of 9) 133 NM_001311111 29807 Mm.320979 NM_013861 ENSMUSG00000029735 Tpk1 - thiamine pyrophosphokinase protein-coding common_peak2_52_258_0.398933477756557_8.21627502656483_2.80645816214644-2 chr9 120058366 120059956 + 2.80645816214644 NA intron (NM_009987, intron 1 of 1) B4|SINE|B4 9135 NM_009987 13051 Mm.44065 NM_009987 ENSMUSG00000052336 Cx3cr1 - chemokine (C-X3-C motif) receptor 1 protein-coding common_peak2_52_258_0.398933477756557_8.21627502656483_2.80645816214644 chr9 63748753 63750128 + 2.80645816214644 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 8554 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_31_255_-0.477134425688476_7.76143278715576_2.80549915027361 chr5 136987027 136987552 + 2.80549915027361 NA promoter-TSS (NM_001310748) promoter-TSS (NM_001310748) 270 NM_011962 26433 Mm.251003 NM_011962 ENSMUSG00000004846 Plod3 AI414586|LH3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 protein-coding common_peak2_61_322_0.357904161226738_8.51434243530729_2.80476736206459 chr17 24735817 24737190 + 2.80476736206459 NA promoter-TSS (NM_013759) promoter-TSS (NM_013759) -139 NM_013759 27361 Mm.28212 NM_013759 ENSMUSG00000075705 Msrb1 D17Wsu82e|SELX|SelR|Sepr|Sepx1 methionine sulfoxide reductase B1 protein-coding unique_peak1_11_25_1.08672343876465_5.24380143752342_2.80467882841136 chr10 17775062 17775328 + 2.80467882841136 NA Intergenic Intergenic -21024 NM_138628 378431 Mm.283493 NM_138628 ENSMUSG00000039891 Txlnb 2310001N14Rik|Mdp77 taxilin beta protein-coding common_peak1_83_489_0.29406132716864_9.08366860258689_2.80443229922037 chr17 79298065 79299371 + 2.80443229922037 NA Intergenic ORR1A4|LTR|ERVL-MaLR 56373 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak1_39_173_0.474803042968404_7.68034501733293_2.80381246924383 chr8 116946312 116946825 + 2.80381246924383 NA intron (NM_177700, intron 1 of 3) intron (NM_177700, intron 1 of 3) 3175 NM_177700 234776 Mm.259736 NM_177700 ENSMUSG00000047388 Atmin Asciz|gpg6|mKIAA0431 ATM interactor protein-coding common_peak2_57_293_0.375603280862562_8.38747398526764_2.80310530454699 chr6 99374055 99375908 + 2.80310530454699 NA intron (NM_053202, intron 1 of 18) intron (NM_053202, intron 1 of 18) 60364 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_100_627_0.26222744471383_9.42573447124854_2.80264995823893 chr14 27507851 27509110 + 2.80264995823893 NA promoter-TSS (NM_177111) promoter-TSS (NM_177111) -20 NM_177111 320234 Mm.247767 NM_177111 ENSMUSG00000046753 Ccdc66 E230015L20Rik coiled-coil domain containing 66 protein-coding common_peak2_44_365_-0.389521200719411_8.32093923792434_2.80231686349594-2 chr7 142346943 142348607 + 2.80231686349594 NA intron (NM_177265, intron 3 of 3) intron (NM_177265, intron 3 of 3) 24484 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak2_44_365_-0.389521200719411_8.32093923792434_2.80231686349594 chr7 44743882 44745942 + 2.80231686349594 NA intron (NM_178734, intron 1 of 4) RMER17C-int|LTR|ERVK 3437 NM_001289836 243963 Mm.382935 NM_178734 ENSMUSG00000048012 Zfp473 D030014N22Rik|Znf473|zfp-100 zinc finger protein 473 protein-coding common_peak1_44_365_-0.389521200719411_8.32093923792434_2.80231686349594 chr5 77309224 77310087 + 2.80231686349594 NA promoter-TSS (NM_153798) promoter-TSS (NM_153798) 431 NM_019836 56412 Mm.129136 NM_019836 ENSMUSG00000036285 Noa1 2610024G14Rik|AU022345|AtNOS1|mAtNOS1 nitric oxide associated 1 protein-coding common_peak2_60_315_0.36073870286987_8.48415009961204_2.80172508275098 chr2 103651647 103653396 + 2.80172508275098 NA intron (NM_178890, intron 1 of 16) B1F|SINE|Alu 86211 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_89_537_0.281328586194364_9.2121266556538_2.80088573020963 chr8 20549595 20551405 + 2.80088573020963 NA Intergenic CpG -64427 NM_001270553 100861668 Mm.491087 NM_001270553 ENSMUSG00000095294 Gm21119 - predicted gene, 21119 protein-coding unique_peak2_36_297_-0.439384869250752_7.99947608583679_2.80058220247145 chr7 126463726 126465207 + 2.80058220247145 NA Intergenic Intergenic -1393 NM_007504 11937 Mm.35134 NM_007504 ENSMUSG00000030730 Atp2a1 SERCA1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 protein-coding common_peak1_36_297_-0.439384869250752_7.99947608583679_2.80058220247145 chr1 178368525 178369169 + 2.80058220247145 NA Intergenic Intergenic -31063 NM_016805 51810 Mm.86589 NM_016805 ENSMUSG00000039630 Hnrnpu AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U heterogeneous nuclear ribonucleoprotein U protein-coding common_peak1_191_1857_-0.165922384731489_10.7765735940169_2.79968032392891 chr4 98923326 98924713 + 2.79968032392891 NA 5' UTR (NM_146144, exon 1 of 9) 5' UTR (NM_146144, exon 1 of 9) 209 NM_146144 230484 Mm.371692 NM_146144 ENSMUSG00000028560 Usp1 - ubiquitin specific peptidase 1 protein-coding common_peak2_78_676_-0.28091293246168_9.26255555734416_2.79885137512831 chr5 124578406 124579843 + 2.79885137512831 NA promoter-TSS (NM_145371) promoter-TSS (NM_145371) 7 NM_145371 209354 Mm.28839 NM_145371 ENSMUSG00000029388 Eif2b1 D5Ertd406e|EIF2BA eukaryotic translation initiation factor 2B, subunit 1 (alpha) protein-coding common_peak2_68_582_-0.304756752953702_9.03497369672365_2.79844198316425 chr6 50524824 50526854 + 2.79844198316425 NA Intergenic MTE2a|LTR|ERVL-MaLR 40635 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding common_peak1_40_179_0.469590168735751_7.72664818069755_2.79826497444947 chr1 86406637 86407649 + 2.79826497444947 NA Intergenic Intergenic -19002 NM_010341 14767 Mm.389159 NM_010341 ENSMUSG00000026237 Nmur1 FM-3|Gpr66|NMU-R1|NMU1R|NmU-R neuromedin U receptor 1 protein-coding common_peak2_40_179_0.469590168735751_7.72664818069755_2.79826497444947 chr15 64234481 64235749 + 2.79826497444947 NA intron (NM_001276462, intron 1 of 27) intron (NM_001276462, intron 1 of 27) 77558 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_97_861_-0.248055510992058_9.62751630359307_2.79775038432247 chr6 8258502 8260184 + 2.79775038432247 NA promoter-TSS (NM_026632) promoter-TSS (NM_026632) 55 NM_001302353 100036521 Mm.446106 NM_001302353 ENSMUSG00000089862 Umad1 Gm16039|OTTMUSG00000029336 UMAP1-MVP12 associated (UMA) domain containing 1 protein-coding common_peak1_15_42_0.86998850842307_5.86125900891363_2.79764007137193 chr9 40743439 40743806 + 2.79764007137193 NA intron (NM_133733, intron 1 of 6) intron (NM_133733, intron 1 of 6) -57651 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding common_peak2_85_743_-0.266819329667726_9.40574914627417_2.7975119215992 chr10 128625574 128626973 + 2.7975119215992 NA intron (NM_013765, intron 1 of 3) CpG 233 NM_013765 27370 Mm.32118 NM_013765 ENSMUSG00000025362 Rps26 - ribosomal protein S26 protein-coding common_peak1_205_1607_0.167108503784169_10.734605943071_2.79746167149263 chr2 27539850 27540790 + 2.79746167149263 NA Intergenic CpG 25173 NM_080848 140858 Mm.28265 NM_080848 ENSMUSG00000026917 Wdr5 2410008O07Rik|AA408785|AA960360|Big|Big-3 WD repeat domain 5 protein-coding common_peak1_134_1238_-0.204647318422687_10.1726368129293_2.79742855742153 chr4 95195126 95197450 + 2.79742855742153 NA Intergenic Intergenic -144066 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak1_21_70_0.710050623189269_6.50477243109932_2.79719111595253 chr9 118073015 118073552 + 2.79719111595253 NA intron (NM_026442, intron 3 of 3) B1F|SINE|Alu 32761 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak1_58_301_0.367121665716747_8.42196557218345_2.79713817798521 chr4 153974371 153975097 + 2.79713817798521 NA promoter-TSS (NM_177673) promoter-TSS (NM_177673) 347 NM_007859 13368 Mm.388918 NM_007859 ENSMUSG00000029027 Dffb 40kDa|5730477D02Rik|CAD|CPAN|DFF40|Didff DNA fragmentation factor, beta subunit protein-coding common_peak2_73_411_0.319895435214548_8.84644824479049_2.79670515587767 chr1 106646659 106649075 + 2.79670515587767 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) 66423 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak1_22_182_-0.577239034190533_7.22708032118878_2.79504899273807 chr13 91702286 91702718 + 2.79504899273807 NA non-coding (NR_015501, exon 2 of 2) non-coding (NR_015501, exon 2 of 2) -39019 NM_028790 74156 Mm.275963 NM_028790 ENSMUSG00000021620 Acot12 1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1 acyl-CoA thioesterase 12 protein-coding common_peak2_22_182_-0.577239034190533_7.22708032118878_2.79504899273807 chr2 71873248 71873912 + 2.79504899273807 NA intron (NM_172665, intron 1 of 10) CpG 356 NM_172665 228026 Mm.34411 NM_172665 ENSMUSG00000006494 Pdk1 B830012B01|D530020C15Rik pyruvate dehydrogenase kinase, isoenzyme 1 protein-coding common_peak1_22_182_-0.577239034190533_7.22708032118878_2.79504899273807-2 chr18 67210548 67211173 + 2.79504899273807 NA intron (NM_177137, intron 5 of 11) intron (NM_177137, intron 5 of 11) 5501 NM_024190 67064 Mm.73777 NM_024190 ENSMUSG00000109901 Chmp1b 2810405I11Rik|Chmp1b1 charged multivesicular body protein 1B protein-coding common_peak2_22_182_-0.577239034190533_7.22708032118878_2.79504899273807-2 chr8 72421657 72422428 + 2.79504899273807 NA promoter-TSS (NM_001289859) promoter-TSS (NM_001289859) -568 NM_001289859 13859 Mm.288894 NM_007944 ENSMUSG00000006276 Eps15l1 9830147J04Rik|AI593686|Eps15-rs|Eps15R epidermal growth factor receptor pathway substrate 15-like 1 protein-coding common_peak1_94_578_0.271050252285976_9.31294466413222_2.7943951064838 chr2 180272523 180273665 + 2.7943951064838 NA intron (NM_145851, intron 1 of 9) CpG 371 NM_145851 252966 Mm.386884 NM_145851 ENSMUSG00000038990 Cables2 ik3-2 CDK5 and Abl enzyme substrate 2 protein-coding common_peak1_121_808_0.231135869803351_9.77556382733165_2.79439214624453 chr13 67398870 67400065 + 2.79439214624453 NA intron (NM_001080941, intron 1 of 3) intron (NM_001080941, intron 1 of 3) 300 NM_001080941 72807 Mm.303790 NM_001080941 ENSMUSG00000078994 Zfp429 2810487A22Rik|AI929863|Rsl2 zinc finger protein 429 protein-coding common_peak1_99_619_0.263115409234857_9.40768210989167_2.79383837259675 chr19 8871537 8872342 + 2.79383837259675 NA intron (NM_146093, intron 3 of 9) CpG-7330 380 NM_146093 225896 Mm.27839 NM_146093 ENSMUSG00000071655 Ubxn1 2B28|4930455J02Rik|D19Ertd721e|T25529 UBX domain protein 1 protein-coding common_peak1_19_60_0.76039689006789_6.31093578259683_2.79364893869913 chr16 91366050 91366476 + 2.79364893869913 NA Intergenic B4|SINE|B4 -6520 NM_010509 15976 Mm.6834 NM_010509 ENSMUSG00000022971 Ifnar2 AI747302|Ifnar-2 interferon (alpha and beta) receptor 2 protein-coding common_peak1_19_60_0.76039689006789_6.31093578259683_2.79364893869913-2 chr5 105136704 105137189 + 2.79364893869913 NA exon (NM_001256005, exon 2 of 11) exon (NM_001256005, exon 2 of 11) 2606 NM_008620 17472 Mm.440525 NM_008620 ENSMUSG00000079363 Gbp4 AW228052|Mag-2|Mpa-2|Mpa2 guanylate binding protein 4 protein-coding unique_peak1_19_60_0.76039689006789_6.31093578259683_2.79364893869913 chr2 167973162 167973594 + 2.79364893869913 NA intron (NM_011201, intron 5 of 8) intron (NM_011201, intron 5 of 8) 37215 NM_001080708 69553 Mm.68454 NM_001080708 ENSMUSG00000074577 Fam65c 2310033K02Rik|Gm124 family with sequence similarity 65, member C protein-coding common_peak1_67_573_-0.308146043328804_9.01083390501129_2.79350648855616 chr6 122274167 122275164 + 2.79350648855616 NA intron (NM_016970, intron 3 of 4) intron (NM_016970, intron 3 of 4) 8168 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak2_185_1790_-0.169120589912016_10.72198932703_2.79350311538384 chr18 65394427 65397235 + 2.79350311538384 NA intron (NR_105742, intron 3 of 6) intron (NR_105742, intron 3 of 6) -1943 NM_001037294 225638 Mm.296528 NM_001037294 ENSMUSG00000032845 Alpk2 Gm549|Hak alpha-kinase 2 protein-coding common_peak1_242_2442_-0.143961549121093_11.1824573737067_2.7923169892562 chr17 65612301 65614323 + 2.7923169892562 NA 5' UTR (NM_013933, exon 1 of 6) 5' UTR (NM_013933, exon 1 of 6) 243 NM_013933 30960 Mm.266767 NM_013933 ENSMUSG00000024091 Vapa 33kDa|VAP33 vesicle-associated membrane protein, associated protein A protein-coding common_peak2_335_3021_0.122635943379095_11.6226059168544_2.79156285403527 chr4 123560408 123566830 + 2.79156285403527 NA intron (NM_001199137, intron 1 of 92) Charlie18a|DNA|hAT-Charlie -52801 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak2_77_667_-0.284148531679834_9.24163002663413_2.7914259254562 chr1 182527436 182529109 + 2.7914259254562 NA Intergenic Intergenic -10789 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_32_263_-0.467074171697575_7.81085703350967_2.79102582710849 chr17 33842831 33843768 + 2.79102582710849 NA promoter-TSS (NM_001305169) promoter-TSS (NM_001305169) -127 NM_001305169 54219 Mm.11175 NM_019421 ENSMUSG00000002308 Cd320 425O18-1|8D6|D17Ertd716e|NG29|TCblR|VLDL CD320 antigen protein-coding unique_peak2_16_135_-0.683926580276167_6.74549955111226_2.79030669339515-2 chr18 79303061 79304123 + 2.79030669339515 NA Intergenic Intergenic -194201 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_16_135_-0.683926580276167_6.74549955111226_2.79030669339515-3 chrX 50835975 50836304 + 2.79030669339515 NA Intergenic Intergenic -5232 NM_133729 70415 Mm.46254 NM_133729 ENSMUSG00000031112 Stk26 2610018G03Rik|Mst4 serine/threonine kinase 26 protein-coding common_peak1_16_135_-0.683926580276167_6.74549955111226_2.79030669339515 chr1 170980175 170980618 + 2.79030669339515 NA Intergenic ORR1A2-int|LTR|ERVL-MaLR -4325 NM_010187 14130 Mm.425062 NM_010187 ENSMUSG00000026656 Fcgr2b AI528646|CD32|F630109E10Rik|Fc[g]RII|FcgRII|Fcgr2|Fcgr2a|Fcr-2|Fcr-3|Ly-17|Ly-m20|LyM-1|Lym-1|fcRII Fc receptor, IgG, low affinity IIb protein-coding unique_peak2_16_135_-0.683926580276167_6.74549955111226_2.79030669339515 chr18 38371629 38372496 + 2.79030669339515 NA Intergenic Intergenic -33069 NM_011937 26384 Mm.22374 NM_011937 ENSMUSG00000052102 Gnpda1 GNPDA|Gnp1|Gnpi|oscillin glucosamine-6-phosphate deaminase 1 protein-coding common_peak1_16_135_-0.683926580276167_6.74549955111226_2.79030669339515-2 chr15 76607159 76607527 + 2.79030669339515 NA exon (NM_001164173, exon 1 of 37) exon (NM_001164173, exon 1 of 37) 248 NM_053193 94230 Mm.45141 NM_053193 ENSMUSG00000034022 Cpsf1 - cleavage and polyadenylation specific factor 1 protein-coding common_peak2_108_695_0.248798739680907_9.56734286568918_2.790077980937 chr19 4133965 4136430 + 2.790077980937 NA TTS (NM_144532) TTS (NM_144532) 4412 NM_144532 73660 Mm.379226 NM_144532 ENSMUSG00000024842 Cabp4 2410038D05Rik calcium binding protein 4 protein-coding common_peak2_47_391_-0.374322064836756_8.42754881169683_2.78989431966439-2 chr5 100727920 100729612 + 2.78989431966439 NA Intergenic Intergenic -9083 NM_152803 15442 Mm.265786 NM_152803 ENSMUSG00000035273 Hpse HSE1|Hpa|Hpr1 heparanase protein-coding unique_peak2_47_391_-0.374322064836756_8.42754881169683_2.78989431966439 chr16 20610208 20612154 + 2.78989431966439 NA promoter-TSS (NM_177941) promoter-TSS (NM_177941) -420 NM_177940 107522 Mm.263319 NM_025462 ENSMUSG00000022842 Ece2 1810009K13Rik|6330509A19Rik|9630025D12Rik|BB127715|Ece-2 endothelin converting enzyme 2 protein-coding common_peak2_47_391_-0.374322064836756_8.42754881169683_2.78989431966439 chr13 40917056 40918700 + 2.78989431966439 NA 5' UTR (NM_133219, exon 1 of 3) 5' UTR (NM_133219, exon 1 of 3) 244 NM_133219 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding unique_peak2_18_150_-0.638040535928188_6.91938447136098_2.78983855170781 chr11 72490044 72491105 + 2.78983855170781 NA promoter-TSS (NM_153060) promoter-TSS (NM_153060) -654 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak1_18_150_-0.638040535928188_6.91938447136098_2.78983855170781-3 chr6 130238181 130238640 + 2.78983855170781 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -5088 NM_001110323 16638 Mm.441781 NM_014194 ENSMUSG00000067599 Klra7 LGL-1|Ly-49G.1|Ly-49G.2|Ly-49G.3|Ly49G.4|Ly49g|Ly49g1|Ly49g2 killer cell lectin-like receptor, subfamily A, member 7 protein-coding common_peak1_18_150_-0.638040535928188_6.91938447136098_2.78983855170781 chr15 78490159 78490609 + 2.78983855170781 NA intron (NM_008368, intron 3 of 9) intron (NM_008368, intron 3 of 9) 4682 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding common_peak1_18_150_-0.638040535928188_6.91938447136098_2.78983855170781-2 chr4 136189769 136190241 + 2.78983855170781 NA intron (NM_177733, intron 6 of 6) intron (NM_177733, intron 6 of 6) 9223 NM_001305399 242705 Mm.307932 NM_177733 ENSMUSG00000018983 E2f2 E2F-2 E2F transcription factor 2 protein-coding common_peak1_84_734_-0.269958591871235_9.38662114378811_2.78883434628633 chr3 52877845 52879072 + 2.78883434628633 NA Intergenic Intergenic 49208 NR_040555 622124 Mm.389434 NR_040555 ENSMUSG00000104401 Gm20750 - predicted gene, 20750 ncRNA common_peak1_46_383_-0.381831413295139_8.39404679407359_2.78825975751516 chr10 108167874 108168884 + 2.78825975751516 NA intron (NM_027892, intron 1 of 25) intron (NM_027892, intron 1 of 25) 5979 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak2_38_313_-0.421677299283767_8.08378209924974_2.78725840548692 chr4 116994899 116996051 + 2.78725840548692 NA exon (NM_175244, exon 1 of 21) exon (NM_175244, exon 1 of 21) 127 NM_175244 76608 Mm.251420 NM_175244 ENSMUSG00000046861 Hectd3 1700064K09Rik|AI467540|AW743312 HECT domain containing 3 protein-coding common_peak1_183_1388_0.178466853671187_10.529064310817_2.78632695726304 chr16 37539034 37540602 + 2.78632695726304 NA promoter-TSS (NM_028812) promoter-TSS (NM_028812) -49 NM_028812 74197 Mm.287795 NM_028812 ENSMUSG00000022828 Gtf2e1 2610024P03Rik|56kDa|AI303800|FE|TFIIE-A general transcription factor II E, polypeptide 1 (alpha subunit) protein-coding common_peak1_116_764_0.23776202818113_9.69819695167058_2.78608046661464 chr1 86228299 86230167 + 2.78608046661464 NA intron (NM_001310702, intron 19 of 24) B1_Mur4|SINE|Alu -73988 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak1_255_2595_-0.139372160128547_11.2723885879349_2.78584987052096 chr5 92504263 92506498 + 2.78584987052096 NA 5' UTR (NM_007644, exon 1 of 12) 5' UTR (NM_007644, exon 1 of 12) 277 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding unique_peak2_20_166_-0.606229648675554_7.08058946813627_2.78554013097672-2 chr5 112640830 112641729 + 2.78554013097672 NA Intergenic Intergenic -51283 NR_045396 67325 Mm.490791 NR_045396 ENSMUSG00000097962 1700034G24Rik - RIKEN cDNA 1700034G24 gene ncRNA unique_peak2_20_166_-0.606229648675554_7.08058946813627_2.78554013097672 chr5 65217282 65218257 + 2.78554013097672 NA intron (NM_153391, intron 6 of 36) intron (NM_153391, intron 6 of 36) 18073 NM_153391 213081 Mm.127550 NM_153391 ENSMUSG00000037890 Wdr19 C330027H04Rik|D330023L08Rik|DYF2|Ift144|PWDMP|mKIAA1638 WD repeat domain 19 protein-coding common_peak1_64_545_-0.315842620586956_8.93483583062637_2.78538699964271 chr9 99575486 99576498 + 2.78538699964271 NA exon (NM_031403, exon 1 of 8) exon (NM_031403, exon 1 of 8) 193 NM_031403 83703 Mm.31324 NM_031403 ENSMUSG00000032469 Dbr1 AW018415 debranching RNA lariats 1 protein-coding common_peak1_30_119_0.559791609125788_7.18678640017141_2.78491879050753-2 chr15 65727151 65727739 + 2.78491879050753 NA Intergenic Intergenic -59596 NM_133766 76740 Mm.260647 NM_133766 ENSMUSG00000015002 Efr3a A130089M23Rik|BB071175|C76891|C920006C10Rik|D030063F01Rik|mKIAA0143 EFR3 homolog A protein-coding common_peak1_30_119_0.559791609125788_7.18678640017141_2.78491879050753 chr15 57792907 57793466 + 2.78491879050753 NA intron (NM_199449, intron 2 of 3) intron (NM_199449, intron 2 of 3) 98519 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding common_peak2_35_148_0.512129152596862_7.47523309676059_2.78486455382281 chr15 57792733 57793678 + 2.78486455382281 NA intron (NM_199449, intron 2 of 3) intron (NM_199449, intron 2 of 3) 98538 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding common_peak1_35_148_0.512129152596862_7.47523309676059_2.78486455382281 chr1 11100177 11100919 + 2.78486455382281 NA intron (NM_029525, intron 7 of 39) RMER4A|LTR|ERVK 107083 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding common_peak1_146_1365_-0.194731015226122_10.318376260677_2.7841626350422 chr3 103967566 103969107 + 2.7841626350422 NA promoter-TSS (NM_001163468) promoter-TSS (NM_001163468) -20 NR_030676 100125931 Mm.400392 NR_030676 ENSMUSG00000089998 Phtf1os A130049A11Rik putative homeodomain transcription factor 1, opposite strand ncRNA unique_peak2_13_112_-0.760226523583618_6.44006570062338_2.78413699413138-2 chr5 88764410 88764936 + 2.78413699413138 NA promoter-TSS (NM_007832) promoter-TSS (NM_007832) -340 NM_007832 13178 Mm.298892 NM_007832 ENSMUSG00000029366 Dck - deoxycytidine kinase protein-coding unique_peak2_13_112_-0.760226523583618_6.44006570062338_2.78413699413138 chr14 47341360 47342103 + 2.78413699413138 NA Intergenic RLTR35B_MM|LTR|ERVL -32129 NM_010705 16854 Mm.248615 NM_010705 ENSMUSG00000050335 Lgals3 GBP|L-34|Mac-2|gal3 lectin, galactose binding, soluble 3 protein-coding common_peak1_13_112_-0.760226523583618_6.44006570062338_2.78413699413138 chr4 95216257 95216586 + 2.78413699413138 NA Intergenic MurERV4_19-int|LTR|ERVK -164199 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding unique_peak2_13_112_-0.760226523583618_6.44006570062338_2.78413699413138-3 chr9 108289840 108290380 + 2.78413699413138 NA promoter-TSS (NM_025449) promoter-TSS (NM_025449) -347 NM_025449 66257 Mm.10407 NM_025449 ENSMUSG00000032606 Nicn1 1500032A17Rik nicolin 1 protein-coding common_peak1_25_206_-0.538065712858393_7.42445410107013_2.78412522718909 chr8 69183831 69184451 + 2.78412522718909 NA Intergenic Intergenic -24905 NM_001013379 234358 Mm.334577 NM_001013379 ENSMUSG00000059897 Zfp930 - zinc finger protein 930 protein-coding unique_peak2_25_206_-0.538065712858393_7.42445410107013_2.78412522718909 chr5 72711341 72712777 + 2.78412522718909 NA intron (NM_001289495, intron 9 of 14) intron (NM_001289495, intron 9 of 14) 24543 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_83_724_-0.271137918731085_9.36626822553675_2.78401513932416 chr5 105053619 105054628 + 2.78401513932416 NA promoter-TSS (NM_029509) promoter-TSS (NM_029509) -562 NM_029509 76074 Mm.458519 NM_029509 ENSMUSG00000034438 Gbp8 5830443L24Rik|mGBP8 guanylate-binding protein 8 protein-coding common_peak1_95_841_-0.250676332601588_9.5923382567656_2.78382608056189 chr5 149245402 149246429 + 2.78382608056189 NA Intergenic Intergenic -19089 NM_001308462 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding common_peak2_241_2430_-0.144155022206924_11.1752566669253_2.78306415952623 chr11 120572084 120574753 + 2.78306415952623 NA promoter-TSS (NM_011032) promoter-TSS (NM_011032) -482 NM_011032 18453 Mm.16660 NM_011032 ENSMUSG00000025130 P4hb ERp59|PDI|Pdia1|Thbp prolyl 4-hydroxylase, beta polypeptide protein-coding unique_peak2_41_186_0.457192495097218_7.77549070743625_2.78268767866311 chr2 33869753 33871323 + 2.78268767866311 NA intron (NM_175184, intron 2 of 9) intron (NM_175184, intron 2 of 9) 17408 NM_175184 72543 Mm.254914 NM_175184 ENSMUSG00000038740 Mvb12b 2610200O14Rik|2610528K11Rik|AI414895|Fam125b multivesicular body subunit 12B protein-coding common_peak2_41_186_0.457192495097218_7.77549070743625_2.78268767866311 chrX 48512875 48514066 + 2.78268767866311 NA promoter-TSS (NM_012019) promoter-TSS (NM_012019) 93 NM_001290364 26926 Mm.240434 NM_012019 ENSMUSG00000036932 Aifm1 AIF|AIFsh2|Hq|Pdcd8 apoptosis-inducing factor, mitochondrion-associated 1 protein-coding common_peak2_332_2987_0.12308825072874_11.6065085581536_2.78219251294695 chr16 11133467 11136134 + 2.78219251294695 NA promoter-TSS (NM_029582) promoter-TSS (NM_029582) -268 NM_029582 106200 Mm.291015 NM_029582 ENSMUSG00000022498 Txndc11 2810408E11Rik|AI427833|EFP1|Txdc11 thioredoxin domain containing 11 protein-coding common_peak1_89_782_-0.260077548540053_9.48282972302101_2.78185636059306 chr10 117855755 117857113 + 2.78185636059306 NA Intergenic Intergenic -10460 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak1_17_51_0.804245643731575_6.10256254000688_2.78119015976952-4 chr9 75071099 75071483 + 2.78119015976952 NA promoter-TSS (NM_010864) promoter-TSS (NM_010864) 85 NM_010864 17918 Mm.3645 NM_010864 ENSMUSG00000034593 Myo5a 9630007J19Rik|AI413174|AI661011|Dbv|MVa|Myo5|MyoVA|Sev-1|d|d-120J|flail|flr myosin VA protein-coding common_peak1_17_51_0.804245643731575_6.10256254000688_2.78119015976952 chr11 120258702 120259092 + 2.78119015976952 NA intron (NM_198423, intron 2 of 27) intron (NM_198423, intron 2 of 27) 25950 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding common_peak1_17_51_0.804245643731575_6.10256254000688_2.78119015976952-2 chr18 35813174 35813595 + 2.78119015976952 NA Intergenic B1_Mus2|SINE|Alu -16434 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding unique_peak1_17_51_0.804245643731575_6.10256254000688_2.78119015976952-2 chr14 70817686 70818132 + 2.78119015976952 NA Intergenic MTEa|LTR|ERVL-MaLR -35024 NR_045939 73648 Mm.410851 NR_045939 ENSMUSG00000099528 2410012E07Rik - RIKEN cDNA 2410012E07 gene ncRNA unique_peak1_17_51_0.804245643731575_6.10256254000688_2.78119015976952 chr14 32116446 32116892 + 2.78119015976952 NA Intergenic RLTR6-int|LTR|ERV1 -25354 NM_020597 17695 Mm.2540 NM_020597 ENSMUSG00000021907 Msmb PIP|PSP94|beta-MSP beta-microseminoprotein protein-coding common_peak1_17_51_0.804245643731575_6.10256254000688_2.78119015976952-3 chr7 101600677 101600961 + 2.78119015976952 NA Intergenic MTC|LTR|ERVL-MaLR -19658 NM_019915 11872 Mm.57008 NM_019915 ENSMUSG00000030651 Art2b ART2.2|ARTC2|Art|Ly92b|Rt-6|Rt6|Rt6-2 ADP-ribosyltransferase 2b protein-coding common_peak2_107_687_0.249167434510209_9.5508484719572_2.78022183856619 chr17 36957432 36959311 + 2.78022183856619 NA promoter-TSS (NM_023162) promoter-TSS (NM_023162) 57 NM_023162 66136 Mm.486229 NM_023162 ENSMUSG00000036315 Znrd1 1110014N07Rik|Rpa12 zinc ribbon domain containing, 1 protein-coding common_peak2_52_435_-0.352442559333815_8.59196304511002_2.77968094626812 chr5 121838105 121839601 + 2.77968094626812 NA Intergenic Intergenic -1994 NM_001306127 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding common_peak1_92_562_0.273825608807361_9.27390391648391_2.77869426684673 chr5 145083547 145084536 + 2.77869426684673 NA intron (NM_019767, intron 1 of 9) CpG 172 NM_019767 56443 Mm.371610 NM_019767 ENSMUSG00000029621 Arpc1a 0610010H08Rik|1110030K07Rik|41kDa|AA407347|Sid32|Sid329 actin related protein 2/3 complex, subunit 1A protein-coding common_peak2_369_3418_0.115142841842692_11.7969301283547_2.77856073019102 chr11 59225723 59229176 + 2.77856073019102 NA intron (NM_007476, intron 1 of 4) CpG 713 NM_001130408 11840 Mm.371546 NM_007476 ENSMUSG00000048076 Arf1 - ADP-ribosylation factor 1 protein-coding common_peak1_33_271_-0.457314269089812_7.85880570670543_2.77842022744423-3 chr16 43889839 43890474 + 2.77842022744423 NA promoter-TSS (NM_029128) promoter-TSS (NM_029128) 254 NM_027801 212153 Mm.209835 NM_027801 ENSMUSG00000022701 Ccdc191 2610015P09Rik|8430422M09Rik|AU040712 coiled-coil domain containing 191 protein-coding common_peak1_33_271_-0.457314269089812_7.85880570670543_2.77842022744423 chr1 62874769 62875580 + 2.77842022744423 NA Intergenic Intergenic -80442 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA common_peak1_33_271_-0.457314269089812_7.85880570670543_2.77842022744423-2 chr10 88503329 88503970 + 2.77842022744423 NA exon (NM_144807, exon 1 of 8) exon (NM_144807, exon 1 of 8) 321 NR_027477 212862 Mm.288897 NM_144807 ENSMUSG00000060002 Chpt1 - choline phosphotransferase 1 protein-coding common_peak1_362_3910_-0.112620459944214_11.8770115907608_2.77832297708924 chr5 134611380 134615686 + 2.77832297708924 NA intron (NM_022964, intron 1 of 11) intron (NM_022964, intron 1 of 11) 1492 NM_022964 56743 Mm.391375 NM_020044 ENSMUSG00000040751 Lat2 AW125574|LAB|NTAL|WSCR5|Wbscr15|Wbscr5 linker for activation of T cells family, member 2 protein-coding common_peak1_50_418_-0.363135656571895_8.5292386054134_2.77770612764519 chr5 105876291 105877236 + 2.77770612764519 NA intron (NR_030777, intron 1 of 9) CpG 195 NM_018759 54367 Mm.248876 NM_018759 ENSMUSG00000029290 Zfp326 5730470H14Rik|ZAN75|Znf326 zinc finger protein 326 protein-coding common_peak1_54_453_-0.345257468904999_8.65391975283842_2.77749985564848 chr5 143112289 143113038 + 2.77749985564848 NA intron (NM_207110, intron 1 of 16) CpG 357 NM_080561 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding common_peak2_54_453_-0.345257468904999_8.65391975283842_2.77749985564848 chr6 87837738 87838892 + 2.77749985564848 NA intron (NM_133934, intron 1 of 10) intron (NM_133934, intron 1 of 10) 444 NM_133934 57905 Mm.241546 NM_133934 ENSMUSG00000030056 Isy1 5830446M03Rik|AI181014|AU020769 ISY1 splicing factor homolog protein-coding unique_peak2_54_453_-0.345257468904999_8.65391975283842_2.77749985564848 chr5 120577469 120579828 + 2.77749985564848 NA intron (NM_145853, intron 2 of 27) intron (NM_145853, intron 2 of 27) 9965 NM_145853 252972 Mm.114054 NM_145853 ENSMUSG00000032741 Tpcn1 5730403B01Rik|Tpc1|mKIAA1169 two pore channel 1 protein-coding common_peak2_388_3644_0.111414914772778_11.8874105566007_2.7771636398026 chr11 5787173 5790474 + 2.7771636398026 NA intron (NM_013810, intron 1 of 12) CpG 340 NM_013810 13169 Mm.256925 NM_013810 ENSMUSG00000020476 Dbnl Abp1|SH3P7|mAbp1 drebrin-like protein-coding common_peak1_253_2109_0.145795721765852_11.1159251444775_2.77633556174687 chr5 143527354 143528634 + 2.77633556174687 NA promoter-TSS (NM_009007) promoter-TSS (NM_009007) -1 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e RAS-related C3 botulinum substrate 1 protein-coding common_peak1_73_628_-0.290520244481522_9.15165608463853_2.77629380943623 chr11 120315607 120317007 + 2.77629380943623 NA Intergenic Intergenic 31106 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA common_peak2_523_5321_0.0925590891973656_12.4240323396209_2.7761778789735 chr3 135438234 135442512 + 2.7761778789735 NA intron (NM_025356, intron 2 of 7) intron (NM_025356, intron 2 of 7) 1614 NM_025356 66105 Mm.49884 NM_025356 ENSMUSG00000078578 Ube2d3 1100001F19Rik|9430029A22Rik|AA414951 ubiquitin-conjugating enzyme E2D 3 protein-coding common_peak1_102_645_0.256157529082815_9.46346911923533_2.77602784980979 chr5 134582579 134583633 + 2.77602784980979 NA intron (NM_020022, intron 1 of 10) ID_B1|SINE|B4 416 NM_020022 19718 Mm.332739 NM_020022 ENSMUSG00000023104 Rfc2 2610008M13Rik|40kDa|AI326953|Recc2 replication factor C (activator 1) 2 protein-coding common_peak2_311_2748_0.128089191653975_11.4887357873399_2.77593671349134 chr19 3321760 3326220 + 2.77593671349134 NA intron (NM_013495, intron 1 of 18) CpG 689 NM_013495 12894 Mm.18522 NM_013495 ENSMUSG00000024900 Cpt1a C730027G07|CPTI|Cpt1 carnitine palmitoyltransferase 1a, liver protein-coding common_peak2_59_499_-0.330515540878027_8.80052651422307_2.77574964710381 chr13 22035034 22036470 + 2.77574964710381 NA promoter-TSS (NM_175659) promoter-TSS (NM_175659) -69 NM_175665 319184 Mm.358955 NM_175665 ENSMUSG00000062727 Hist1h2bk - histone cluster 1, H2bk protein-coding common_peak2_148_1385_-0.191786540029593_10.3408182721224_2.77554311873722 chr7 44853754 44855548 + 2.77554311873722 NA exon (NM_001253920, exon 5 of 5) exon (NM_001253920, exon 5 of 5) -2495 NM_021549 59047 Mm.238254 NM_021549 ENSMUSG00000002963 Pnkp 1810009G08Rik|PNK polynucleotide kinase 3'- phosphatase protein-coding common_peak1_115_756_0.237738446899549_9.68301871343551_2.77546187414128 chr4 116650730 116651952 + 2.77546187414128 NA 5' UTR (NM_021473, exon 1 of 9) 5' UTR (NM_021473, exon 1 of 9) 333 NM_021473 58810 Mm.30085 NM_021473 ENSMUSG00000028692 Akr1a1 2610201A18Rik|Akr1a4 aldo-keto reductase family 1, member A1 (aldehyde reductase) protein-coding common_peak2_81_704_-0.273423871034373_9.32476751176897_2.77496400981403 chr15 93297242 93299710 + 2.77496400981403 NA intron (NM_024189, intron 2 of 3) intron (NM_024189, intron 2 of 3) -23392 NM_001033275 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak1_108_970_-0.231585249889555_9.80753486047441_2.77467627722541 chr17 7873926 7874950 + 2.77467627722541 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -51562 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding common_peak1_85_505_0.289345906745995_9.12766652806731_2.77427239951028 chr9 50856556 50857636 + 2.77427239951028 NA exon (NM_001034085, exon 1 of 17) exon (NM_001034085, exon 1 of 17) 172 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak1_23_189_-0.556080140238853_7.29181553821152_2.77409807910673-2 chr16 19983284 19983692 + 2.77409807910673 NA promoter-TSS (NM_183390) promoter-TSS (NM_183390) -439 NM_183390 239743 Mm.86699 NM_183390 ENSMUSG00000043008 Klhl6 - kelch-like 6 protein-coding common_peak1_23_189_-0.556080140238853_7.29181553821152_2.77409807910673 chr1 170950557 170951094 + 2.77409807910673 NA Intergenic MTE2b|LTR|ERVL-MaLR -23242 NR_027666 98752 Mm.1850 NM_145141 ENSMUSG00000038421 Fcrla BB219290|FCRL|FCRL1|FREB|Fcrlm1|Fcrx|Freb1|mFREB|mFcrX Fc receptor-like A protein-coding common_peak1_23_189_-0.556080140238853_7.29181553821152_2.77409807910673-3 chr9 103134115 103134682 + 2.77409807910673 NA intron (NM_173781, intron 1 of 7) intron (NM_173781, intron 1 of 7) 22324 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding common_peak1_29_238_-0.492210375383046_7.65476162028923_2.7735540996539 chr11 49052712 49053424 + 2.7735540996539 NA intron (NM_010999, intron 1 of 5) RMER15|LTR|ERVL -1826 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5|OTTMUSG00000005540 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak1_29_238_-0.492210375383046_7.65476162028923_2.7735540996539-2 chr15 90224312 90224875 + 2.7735540996539 NA TTS (NR_106106) TTS (NR_106106) 233 NR_106106 102466838 NR_106106 ENSMUSG00000099319 Mir7648 Gm27736|mmu-mir-7648 microRNA 7648 ncRNA unique_peak2_29_238_-0.492210375383046_7.65476162028923_2.7735540996539 chr3 152925106 152926927 + 2.7735540996539 NA intron (NM_012028, intron 2 of 4) intron (NM_012028, intron 2 of 4) 56191 NM_012028 26938 Mm.40915 NM_012028 ENSMUSG00000039037 St6galnac5 AI851940|Siat7e ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding unique_peak1_27_102_0.600064222834707_6.98653263860057_2.77353960146937 chr18 35661684 35662265 + 2.77353960146937 NA intron (NM_027733, intron 1 of 3) intron (NM_027733, intron 1 of 3) 212 NM_029485 71242 Mm.151498 NM_027733 ENSMUSG00000024352 Spata24 2700012K08Rik|4930583E11Rik|5133400G04Rik|AU016220|TIPT|TIPT2 spermatogenesis associated 24 protein-coding common_peak2_27_102_0.600064222834707_6.98653263860057_2.77353960146937 chr10 84584779 84585763 + 2.77353960146937 NA intron (NM_146008, intron 2 of 9) intron (NM_146008, intron 2 of 9) 8324 NM_146008 216198 Mm.296142 NM_146008 ENSMUSG00000020034 Tcp11l2 E430026E19Rik t-complex 11 (mouse) like 2 protein-coding common_peak2_27_102_0.600064222834707_6.98653263860057_2.77353960146937-3 chr6 129646505 129647489 + 2.77353960146937 NA Intergenic Lx7|LINE|L1 -3709 NM_021378 58179 Mm.358684 NM_021378 ENSMUSG00000033027 Klrc3 Klrc2|Nkg2e killer cell lectin-like receptor subfamily C, member 3 protein-coding common_peak1_27_102_0.600064222834707_6.98653263860057_2.77353960146937 chr10 41957393 41957946 + 2.77353960146937 NA intron (NM_001034858, intron 10 of 17) intron (NM_001034858, intron 10 of 17) 60713 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak1_27_102_0.600064222834707_6.98653263860057_2.77353960146937-2 chr5 134235570 134236090 + 2.77353960146937 NA Intergenic B3|SINE|B2 -6205 NR_104383 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak2_27_102_0.600064222834707_6.98653263860057_2.77353960146937-2 chr14 54653110 54653876 + 2.77353960146937 NA intron (NR_038053, intron 4 of 5) intron (NR_038053, intron 4 of 5) 192 NM_001242605 56215 Mm.297078 NM_019567 ENSMUSG00000022185 Acin1 2610036I19Rik|2610510L13Rik|Acinus|Acn|C79325|acinusL|acinusS|mKIAA0670 apoptotic chromatin condensation inducer 1 protein-coding common_peak1_39_322_-0.417643815876792_8.12656844675553_2.77344215686614-2 chr8 120532758 120533442 + 2.77344215686614 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) -2757 NM_001145897 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_39_322_-0.417643815876792_8.12656844675553_2.77344215686614 chr14 64949329 64950021 + 2.77344215686614 NA promoter-TSS (NM_001253731) promoter-TSS (NM_001253731) 172 NM_177338 219150 Mm.344074 NM_177338 ENSMUSG00000021972 Hmbox1 AI451877|AI604847|F830020C16Rik homeobox containing 1 protein-coding common_peak1_451_5068_-0.0987413280443636_12.2581147845673_2.77284875583053 chr11 104440642 104443520 + 2.77284875583053 NA 5' UTR (NM_001081045, exon 1 of 14) 5' UTR (NM_001081045, exon 1 of 14) 210 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak2_116_1051_-0.221841023531157_9.92799847752672_2.77188179475445 chr19 6339893 6342543 + 2.77188179475445 NA promoter-TSS (NM_001291787) promoter-TSS (NM_001291787) 58 NR_117093 26412 Mm.25860 NM_009006 ENSMUSG00000024948 Map4k2 AI385662|BL44|GCK|Rab8ip mitogen-activated protein kinase kinase kinase kinase 2 protein-coding common_peak1_26_213_-0.519259419561552_7.48183727662037_2.7709954188991-2 chr11 75178910 75179656 + 2.7709954188991 NA promoter-TSS (NM_027136) promoter-TSS (NM_027136) -475 NM_027136 246257 Mm.41496 NM_027136 ENSMUSG00000038268 Ovca2 9030414M07Rik candidate tumor suppressor in ovarian cancer 2 protein-coding common_peak2_26_213_-0.519259419561552_7.48183727662037_2.7709954188991 chr2 147022785 147024318 + 2.7709954188991 NA intron (NM_011917, intron 1 of 29) intron (NM_011917, intron 1 of 29) 10491 NM_011917 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding common_peak1_26_213_-0.519259419561552_7.48183727662037_2.7709954188991 chr1 54921904 54922505 + 2.7709954188991 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 4183 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_93_821_-0.253251185069308_9.55636899114703_2.77035243143876 chr9 64790682 64791795 + 2.77035243143876 NA Intergenic Intergenic -19773 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak2_87_762_-0.262516881767867_9.4442808059506_2.77035201636842 chr10 127675950 127678109 + 2.77035201636842 NA promoter-TSS (NM_001113211) promoter-TSS (NM_001113211) -36 NM_173732 210035 Mm.251075 NM_173732 ENSMUSG00000040195 Nemp1 Tmem194|Tmem194a nuclear envelope integral membrane protein 1 protein-coding common_peak1_40_330_-0.409244141741792_8.16606533593632_2.76974667346473-2 chr3 10330860 10331651 + 2.76974667346473 NA TTS (NM_001010834) TTS (NM_001010834) 184 NM_018864 55980 Mm.183042 NM_018864 ENSMUSG00000027531 Impa1 2610002K09Rik|2900059K10Rik|AI325909 inositol (myo)-1(or 4)-monophosphatase 1 protein-coding common_peak1_40_330_-0.409244141741792_8.16606533593632_2.76974667346473-3 chr4 149166185 149166731 + 2.76974667346473 NA intron (NM_001081274, intron 1 of 12) CpG 249 NM_001081274 110208 Mm.252080 NM_025801 ENSMUSG00000028961 Pgd 0610042A05Rik|AU019875|C78335 phosphogluconate dehydrogenase protein-coding common_peak1_40_330_-0.409244141741792_8.16606533593632_2.76974667346473 chr15 78502178 78503012 + 2.76974667346473 NA Intergenic Intergenic -7529 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding common_peak2_122_817_0.229620748276961_9.79076740708023_2.76906723651835 chr11 51966745 51969268 + 2.76906723651835 NA intron (NM_029976, intron 1 of 2) intron (NM_029976, intron 1 of 2) 375 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak1_71_609_-0.294755448204869_9.10528770834781_2.76809118655519 chr9 66305004 66305993 + 2.76809118655519 NA Intergenic Intergenic -44952 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak2_34_279_-0.447837302421433_7.90536436573425_2.76750709089847 chr2 72996490 72997547 + 2.76750709089847 NA Intergenic Intergenic -16572 NM_001018042 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding common_peak1_24_86_0.643071696287656_6.76447934399256_2.76748705032247 chr18 12832572 12833156 + 2.76748705032247 NA intron (NM_001252491, intron 1 of 12) ORR1A3|LTR|ERVL-MaLR -12957 NR_045524 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak2_217_1731_0.160131331989268_10.8382888807214_2.76733363827466 chr1 133798281 133802461 + 2.76733363827466 NA Intergenic Intergenic -46624 NM_213616 381290 Mm.188617 NM_213616 ENSMUSG00000026463 Atp2b4 Pmca4 ATPase, Ca++ transporting, plasma membrane 4 protein-coding common_peak1_421_4671_-0.102612908554699_12.1385181046027_2.7661754279618 chr4 126108012 126112371 + 2.7661754279618 NA intron (NM_028800, intron 1 of 10) intron (NM_028800, intron 1 of 10) 6234 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak2_66_359_0.33869060382005_8.6611983982397_2.76527340493772 chr8 122459547 122461780 + 2.76527340493772 NA promoter-TSS (NM_013914) promoter-TSS (NM_013914) 29 NM_013914 30927 Mm.103673 NM_013914 ENSMUSG00000006587 Snai3 AI643946|Smuc|Zfp293 snail family zinc finger 3 protein-coding common_peak2_92_811_-0.254519196297586_9.53807631903638_2.76379538429629 chr4 140866719 140870400 + 2.76379538429629 NA Intergenic C-rich|Low_complexity|Low_complexity -4134 NR_040654 75128 Mm.67085 NR_040654 ENSMUSG00000087045 4930515B02Rik - RIKEN cDNA 4930515B02 gene ncRNA common_peak1_238_1950_0.151106451483551_11.0055512883508_2.76358513608078 chr5 38904515 38907602 + 2.76358513608078 NA Intergenic Intergenic -29365 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak1_155_1119_0.196885055035606_10.2277255444628_2.76315563262234 chr11 58199074 58200669 + 2.76315563262234 NA intron (NM_018738, intron 1 of 2) intron (NM_018738, intron 1 of 2) 315 NM_018738 16145 Mm.33902 NM_018738 ENSMUSG00000078853 Igtp AW558444|Irgm3 interferon gamma induced GTPase protein-coding common_peak2_205_2013_-0.157687773043687_10.8970040814849_2.76287150573011 chr10 80398259 80400708 + 2.76287150573011 NA promoter-TSS (NM_013595) promoter-TSS (NM_013595) 48 NM_013595 17192 Mm.7142 NM_013595 ENSMUSG00000035478 Mbd3 AI181826|AU019209 methyl-CpG binding domain protein 3 protein-coding common_peak2_79_685_-0.277705916169324_9.28321180808815_2.76280166970939 chr8 94036182 94037784 + 2.76280166970939 NA promoter-TSS (NM_026623) promoter-TSS (NM_026623) 56 NM_026623 68219 Mm.354445 NM_026623 ENSMUSG00000031754 Nudt21 25kDa|3110048P04Rik|5730530J16Rik|AU014860|AW549947|Cpsf5 nudix (nucleoside diphosphate linked moiety X)-type motif 21 protein-coding common_peak2_115_1041_-0.223251625393226_9.9135137495819_2.76279132707954 chr6 83108262 83110123 + 2.76279132707954 NA promoter-TSS (NM_026744) promoter-TSS (NM_026744) 84 NM_026744 68499 Mm.333183 NM_026744 ENSMUSG00000030037 Mrpl53 1110007K17Rik mitochondrial ribosomal protein L53 protein-coding common_peak1_12_104_-0.785436584211546_6.32152722556035_2.7627157076563 chr4 115838700 115839105 + 2.7627157076563 NA promoter-TSS (NM_001285488) promoter-TSS (NM_001285488) -296 NM_001285488 17346 Mm.209327 NM_021461 ENSMUSG00000028708 Mknk1 2410048M24Rik|Mnk1 MAP kinase-interacting serine/threonine kinase 1 protein-coding common_peak2_200_1957_-0.160486833300689_10.8549216329533_2.76268132003668 chr7 90301593 90305098 + 2.76268132003668 NA intron (NM_001289583, intron 1 of 19) intron (NM_001289583, intron 1 of 19) 990 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_31_125_0.545585650811607_7.25007274890572_2.76235957332206 chr16 48992735 48993311 + 2.76235957332206 NA intron (NM_027341, intron 1 of 30) intron (NM_027341, intron 1 of 30) 1089 NM_001110017 224170 Mm.275138 NM_027341 ENSMUSG00000064061 Dzip3 2310047C04Rik|2A-HUB|6430549P11Rik|A230104G20 DAZ interacting protein 3, zinc finger protein-coding common_peak1_31_125_0.545585650811607_7.25007274890572_2.76235957332206-3 chr7 80680138 80680941 + 2.76235957332206 NA intron (NM_173863, intron 1 of 14) intron (NM_173863, intron 1 of 14) 8338 NM_173863 70461 Mm.392175 NM_173863 ENSMUSG00000030527 Crtc3 2610312F20Rik|6332415K15Rik|AI429792|BC011210|TORC3 CREB regulated transcription coactivator 3 protein-coding common_peak2_31_125_0.545585650811607_7.25007274890572_2.76235957332206 chr4 106957863 106958923 + 2.76235957332206 NA intron (NM_198438, intron 4 of 16) intron (NM_198438, intron 4 of 16) 46923 NM_023672 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak1_31_125_0.545585650811607_7.25007274890572_2.76235957332206-4 chrX 113868215 113868899 + 2.76235957332206 NA Intergenic ERVL-E-int|LTR|ERVL 570301 NM_001142570 93837 Mm.79760 NM_033605 ENSMUSG00000025592 Dach2 9430028N04Rik dachshund 2 (Drosophila) protein-coding unique_peak2_31_125_0.545585650811607_7.25007274890572_2.76235957332206 chr14 23464837 23465852 + 2.76235957332206 NA intron (NM_001253373, intron 13 of 27) intron (NM_001253373, intron 13 of 27) -370773 NR_033550 791307 Mm.364384 NR_033550 ENSMUSG00000068680 Gm10248 ENSMUSG00000068680 predicted gene 10248 ncRNA common_peak1_31_125_0.545585650811607_7.25007274890572_2.76235957332206-2 chr5 127610511 127611329 + 2.76235957332206 NA intron (NM_133895, intron 1 of 7) intron (NM_133895, intron 1 of 7) 6472 NM_133895 100561 Mm.28506 NM_133895 ENSMUSG00000029416 Slc15a4 AA987064|AW742963|C130069N12Rik|PHT1|PTR4 solute carrier family 15, member 4 protein-coding common_peak2_109_704_0.246423882286116_9.58469138842921_2.76091320510656 chr6 124661977 124663847 + 2.76091320510656 NA promoter-TSS (NM_145130) promoter-TSS (NM_145130) -192 NM_145130 14792 Mm.273915 NM_145130 ENSMUSG00000004270 Lpcat3 C3f|Grcc3f|Lpcat|Lpeat|Lplat5|Lpsat|Mboat5|Moact5|Oact5|PTG lysophosphatidylcholine acyltransferase 3 protein-coding common_peak2_36_155_0.494381432349162_7.53259293503683_2.75995596904293 chr12 25326274 25327218 + 2.75995596904293 NA Intergenic Intergenic 197572 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_36_155_0.494381432349162_7.53259293503683_2.75995596904293 chr12 73586944 73587726 + 2.75995596904293 NA intron (NM_008856, intron 1 of 13) MER5B|DNA|hAT-Charlie 2539 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_36_155_0.494381432349162_7.53259293503683_2.75995596904293-2 chr2 158794103 158794841 + 2.75995596904293 NA promoter-TSS (NM_001291144) promoter-TSS (NM_001291144) -335 NM_145742 71715 Mm.315652 NM_145742 ENSMUSG00000027655 Dhx35 1200009D07Rik|Ddx35 DEAH (Asp-Glu-Ala-His) box polypeptide 35 protein-coding common_peak2_65_352_0.340407885576056_8.63372831605921_2.75960024358358 chr2 125781999 125783262 + 2.75960024358358 NA 5' UTR (NM_177608, exon 1 of 18) 5' UTR (NM_177608, exon 1 of 18) 240 NM_177608 70354 Mm.138091 NM_133725 ENSMUSG00000035093 Secisbp2l 3110001I20Rik|AI504340|C630011I23 SECIS binding protein 2-like protein-coding common_peak1_41_339_-0.405303981152848_8.20673894556128_2.75864699320339 chr4 87984988 87985635 + 2.75864699320339 NA intron (NM_027326, intron 2 of 10) L1MA9|LINE|L1 48096 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak1_21_173_-0.583145753154777_7.15137061927134_2.75832477751631-3 chr8 120744013 120744574 + 2.75832477751631 NA intron (NM_008320, intron 3 of 8) intron (NM_008320, intron 3 of 8) 5654 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_21_173_-0.583145753154777_7.15137061927134_2.75832477751631-2 chr2 165211468 165211874 + 2.75832477751631 NA intron (NM_174988, intron 1 of 11) intron (NM_174988, intron 1 of 11) 23066 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak1_21_173_-0.583145753154777_7.15137061927134_2.75832477751631-4 chr9 21160817 21161365 + 2.75832477751631 NA Intergenic ID_B1|SINE|B4 -4623 NM_183408 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding common_peak1_21_173_-0.583145753154777_7.15137061927134_2.75832477751631 chr1 171111061 171111432 + 2.75832477751631 NA Intergenic Intergenic -10415 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak2_45_212_0.430363495054027_7.94989136775285_2.75813244547009 chr9 41228627 41229419 + 2.75813244547009 NA Intergenic Intergenic 22868 NR_040392 78500 Mm.275715 NR_040392 ENSMUSG00000100837 1700063D05Rik - RIKEN cDNA 1700063D05 gene ncRNA common_peak2_324_3431_-0.11981373028833_11.6849269723554_2.75791271869885 chr6 87493615 87498139 + 2.75791271869885 NA intron (NM_001286610, intron 1 of 9) intron (NM_001286610, intron 1 of 9) 450 NR_104483 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak2_101_899_-0.239498102903225_9.69403213976543_2.7575443207186 chr9 48984270 48986128 + 2.7575443207186 NA promoter-TSS (NM_175482) promoter-TSS (NM_175482) -186 NM_175482 235323 Mm.21630 NM_175482 ENSMUSG00000032267 Usp28 9830148O20Rik|AU022237|mKIAA1515 ubiquitin specific peptidase 28 protein-coding common_peak1_75_427_0.312121839368457_8.89752790608538_2.75750147445775 chr7 83631221 83632458 + 2.75750147445775 NA promoter-TSS (NM_023377) promoter-TSS (NM_023377) -178 NM_023377 170460 Mm.357953 NM_023377 ENSMUSG00000046027 Stard5 2310058G22Rik|AI607880|D7Ertd152e StAR-related lipid transfer (START) domain containing 5 protein-coding common_peak1_42_347_-0.397216325594778_8.24433533305134_2.75694233422419 chr5 100526508 100527120 + 2.75694233422419 NA intron (NM_012001, intron 1 of 9) MT2B|LTR|ERVL 8505 NM_012001 26891 Mm.957 NM_012001 ENSMUSG00000035297 Cops4 AW208976|D5Ertd774e COP9 signalosome subunit 4 protein-coding common_peak1_30_246_-0.481685026850371_7.70752471815949_2.75604725535606 chr1 171113502 171114246 + 2.75604725535606 NA Intergenic Intergenic -7787 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak2_63_337_0.348598449215697_8.57517866089003_2.7557050139323 chr5 72160484 72162104 + 2.7557050139323 NA intron (NM_178599, intron 3 of 4) intron (NM_178599, intron 3 of 4) 6889 NM_178599 27784 Mm.44223 NM_178599 ENSMUSG00000029213 Commd8 C77770|D5Buc26e COMM domain containing 8 protein-coding common_peak1_63_337_0.348598449215697_8.57517866089003_2.7557050139323 chr18 12955184 12956330 + 2.7557050139323 NA Intergenic Intergenic -13916 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak1_63_337_0.348598449215697_8.57517866089003_2.7557050139323-2 chr7 101455283 101456465 + 2.7557050139323 NA intron (NM_001008548, intron 2 of 30) intron (NM_001008548, intron 2 of 30) 4622 NM_001243757 207728 Mm.247564 NM_001008548 ENSMUSG00000030653 Pde2a CGS-PDE|cGSPDE phosphodiesterase 2A, cGMP-stimulated protein-coding common_peak1_63_337_0.348598449215697_8.57517866089003_2.7557050139323-3 chr9 86467010 86467875 + 2.7557050139323 NA intron (NM_177208, intron 1 of 38) CpG 288 NM_177208 320615 Mm.245500 NM_177208 ENSMUSG00000034973 Dopey1 B130005I07Rik|BC035275|C130028L17|D9Ertd809e dopey family member 1 protein-coding common_peak1_68_581_-0.302280022661488_9.03373533157754_2.75549684559028 chr15 58823681 58824394 + 2.75549684559028 NA promoter-TSS (NM_175212) promoter-TSS (NM_175212) -610 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding common_peak1_19_157_-0.612646520546327_6.99745748790394_2.75423796876884-3 chr8 117343053 117343539 + 2.75423796876884 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -5874 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_19_157_-0.612646520546327_6.99745748790394_2.75423796876884 chr15 85633865 85634343 + 2.75423796876884 NA Intergenic Intergenic -52283 NM_009528 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak1_19_157_-0.612646520546327_6.99745748790394_2.75423796876884-2 chr15 103162948 103163431 + 2.75423796876884 NA promoter-TSS (NM_027885) promoter-TSS (NM_027885) 95 NM_027885 71726 Mm.254820 NM_027885 ENSMUSG00000036061 Smug1 1200013B09Rik|A930006H09Rik|C85220 single-strand selective monofunctional uracil DNA glycosylase protein-coding common_peak2_333_3000_0.122131313276027_11.6122932602363_2.75380501440575 chr13 56132311 56136419 + 2.75380501440575 NA intron (NM_012015, intron 1 of 8) intron (NM_012015, intron 1 of 8) 1185 NM_012015 26914 Mm.283802 NM_012015 ENSMUSG00000015937 H2afy H2AF12M|mH2a1|macroH2A1 H2A histone family, member Y protein-coding common_peak2_47_225_0.420208816863264_8.03028337084682_2.75280684168591 chr15 96598425 96599635 + 2.75280684168591 NA intron (NM_134086, intron 4 of 15) intron (NM_134086, intron 4 of 15) 42932 NM_134086 105727 Mm.103568 NM_134086 ENSMUSG00000023169 Slc38a1 AA408026|AA409865|AL022800|AU015942|NAT2 solute carrier family 38, member 1 protein-coding unique_peak2_15_127_-0.703746736874832_6.64812663156258_2.75217447974983 chr6 48443474 48444442 + 2.75217447974983 NA intron (NM_020589, intron 1 of 4) intron (NM_020589, intron 1 of 4) 1132 NM_001085415 68910 Mm.2464 NM_020589 ENSMUSG00000068551 Zfp467 1190001I08Rik|AB041616|AI426952|AV017623|EZI|MNCb-3350|Znf467 zinc finger protein 467 protein-coding common_peak1_15_127_-0.703746736874832_6.64812663156258_2.75217447974983 chr9 35559507 35559972 + 2.75217447974983 NA intron (NM_023292, intron 1 of 3) intron (NM_023292, intron 1 of 3) 273 NM_023292 67049 Mm.425574 NM_023292 ENSMUSG00000032103 Pus3 2610020J05Rik|5730412F04Rik pseudouridine synthase 3 protein-coding common_peak2_82_482_0.293626490332574_9.06269262400206_2.75176996543509 chr12 108617179 108619030 + 2.75176996543509 NA intron (NM_001163395, intron 1 of 12) intron (NM_001163395, intron 1 of 12) 12338 NM_001163395 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774 Ena-vasodilator stimulated phosphoprotein protein-coding common_peak1_191_1855_-0.164368593476409_10.7757966983894_2.75157343359396 chr2 25545763 25547499 + 2.75157343359396 NA intron (NM_009422, intron 1 of 10) CpG 309 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding common_peak1_172_1644_-0.174661337130054_10.5965412000576_2.75121728402357 chr5 142908320 142910250 + 2.75121728402357 NA Intergenic Intergenic -2531 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak2_90_791_-0.257011577359563_9.50085083139983_2.75106438565014 chr15 80589869 80591758 + 2.75106438565014 NA intron (NM_001289442, intron 1 of 7) intron (NM_001289442, intron 1 of 7) 18216 NM_001289442 17444 Mm.12947 NM_010815 ENSMUSG00000042351 Grap2 GRAP-2|GRB2L|GRBLG|GRID|Gads|GrbX|Grf40|GrpL|Mona|P38 GRB2-related adaptor protein 2 protein-coding common_peak2_108_696_0.246727389661213_9.56837854069903_2.75084778002172 chr12 80813352 80817521 + 2.75084778002172 NA intron (NM_178682, intron 1 of 5) (TG)n|Simple_repeat|Simple_repeat 24904 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding common_peak1_37_161_0.487126511698622_7.58341325873394_2.75079440670297 chr11 54936137 54936790 + 2.75079440670297 NA exon (NM_001199276, exon 4 of 17) exon (NM_001199276, exon 4 of 17) 26477 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak1_37_161_0.487126511698622_7.58341325873394_2.75079440670297-3 chr9 116161252 116161951 + 2.75079440670297 NA intron (NM_009371, intron 1 of 7) RSINE1|SINE|B4 13762 NM_029575 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_37_161_0.487126511698622_7.58341325873394_2.75079440670297-2 chr15 85037111 85037674 + 2.75079440670297 NA intron (NM_133750, intron 1 of 8) intron (NM_133750, intron 1 of 8) 330 NM_133750 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding common_peak2_67_572_-0.305630445410022_9.0095761060519_2.7502703466771 chr2 79370043 79372620 + 2.7502703466771 NA intron (NM_001048176, intron 2 of 12) intron (NM_001048176, intron 2 of 12) 57657 NM_001048176 228094 Mm.440704 NM_001033295 ENSMUSG00000075256 Cerkl Gm1958|Rp26 ceramide kinase-like protein-coding common_peak1_142_1321_-0.196316114925265_10.2703484040451_2.74976661852788 chr6 99265040 99266744 + 2.74976661852788 NA intron (NM_053202, intron 2 of 18) intron (NM_053202, intron 2 of 18) 623 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_300_2626_0.130062794385788_11.4242318823265_2.74930254789182 chr2 91709726 91711601 + 2.74930254789182 NA promoter-TSS (NM_145528) promoter-TSS (NM_145528) -71 NM_145528 51897 Mm.28492 NM_145528 ENSMUSG00000027244 Atg13 1110053A20Rik|D2Ertd391e|Harbi1 autophagy related 13 protein-coding unique_peak2_11_96_-0.812749685281388_6.19353799954643_2.74902659363851 chr10 79746134 79746655 + 2.74902659363851 NA intron (NM_172551, intron 1 of 20) intron (NM_172551, intron 1 of 20) 187 NM_172551 216151 Mm.39001 NM_172551 ENSMUSG00000020329 Polrmt 1110018N15Rik|4932416K13 polymerase (RNA) mitochondrial (DNA directed) protein-coding common_peak2_302_2648_0.12975058138912_11.4361074190642_2.74897491929359 chr2 91709703 91711872 + 2.74897491929359 NA promoter-TSS (NM_145528) promoter-TSS (NM_145528) -163 NM_178724 241547 Mm.130331 NM_178724 ENSMUSG00000027243 Harbi1 D230010M03Rik harbinger transposase derived 1 protein-coding common_peak1_95_840_-0.248961899790336_9.59148104035998_2.74816959488284 chr9 99122998 99123826 + 2.74816959488284 NA intron (NM_029094, intron 1 of 23) PB1D9|SINE|Alu 16799 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak1_180_1733_-0.170680867745473_10.6745477493491_2.74742904927163 chr2 155552037 155554833 + 2.74742904927163 NA intron (NR_040613, intron 2 of 3) intron (NR_040613, intron 2 of 3) 3495 NR_040613 74945 Mm.401956 NR_040613 ENSMUSG00000086529 Acss2os 4930471I20Rik acyl-CoA synthetase short-chain family member 2, opposite strand ncRNA common_peak2_113_1020_-0.224656120141271_9.88343909080717_2.74733708308796-2 chr10 117924237 117927456 + 2.74733708308796 NA intron (NR_045342, intron 1 of 3) B3|SINE|B2 387 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_113_1020_-0.224656120141271_9.88343909080717_2.74733708308796 chr1 192090938 192093303 + 2.74733708308796 NA intron (NM_011633, intron 1 of 9) intron (NM_011633, intron 1 of 9) 479 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak2_61_323_0.353444513036038_8.51657225940264_2.74715418489551 chr8 61223446 61224686 + 2.74715418489551 NA promoter-TSS (NM_021506) promoter-TSS (NM_021506) -105 NM_021506 59009 Mm.27949 NM_021506 ENSMUSG00000031642 Sh3rf1 2200003J05Rik|Posh|R75531|Sh3md2 SH3 domain containing ring finger 1 protein-coding common_peak2_61_323_0.353444513036038_8.51657225940264_2.74715418489551-2 chr9 96477789 96479026 + 2.74715418489551 NA intron (NM_001311135, intron 1 of 2) CpG 268 NM_011279 19823 Mm.28235 NM_011279 ENSMUSG00000051234 Rnf7 Rbx2|SAG ring finger protein 7 protein-coding unique_peak2_27_221_-0.507851116332181_7.54049030818402_2.74677916110639 chr14 54516713 54517558 + 2.74677916110639 NA intron (NM_013768, intron 1 of 16) intron (NM_013768, intron 1 of 16) 335 NM_001313906 27374 Mm.196585 NM_013768 ENSMUSG00000023110 Prmt5 Jbp1|Skb1 protein arginine N-methyltransferase 5 protein-coding common_peak1_27_221_-0.507851116332181_7.54049030818402_2.74677916110639 chr7 28277720 28278217 + 2.74677916110639 NA exon (NM_001177427, exon 1 of 1) exon (NM_001177427, exon 1 of 1) 262 NM_001177427 434156 Mm.118535 NM_001177427 ENSMUSG00000070705 Eid2b 3010005C08Rik EP300 interacting inhibitor of differentiation 2B protein-coding common_peak1_310_2738_0.127665840428687_11.4832664709197_2.74676525970891 chr13 55210176 55211791 + 2.74676525970891 NA intron (NM_008739, intron 1 of 22) CpG 1201 NM_008739 18193 Mm.12964 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak2_259_2175_0.142676301455269_11.158800991978_2.74673064379592 chr5 135167765 135169698 + 2.74673064379592 NA intron (NM_009745, intron 1 of 5) CpG 359 NM_009745 12054 Mm.405834 NM_009745 ENSMUSG00000029681 Bcl7b - B cell CLL/lymphoma 7B protein-coding common_peak2_193_1877_-0.163030673104009_10.7934660111018_2.74629727629513 chr8 71462165 71465737 + 2.74629727629513 NA promoter-TSS (NM_022419) promoter-TSS (NM_022419) -294 NM_022419 64296 Mm.276383 NM_022419 ENSMUSG00000007950 Abhd8 0910001L24Rik|AB030191 abhydrolase domain containing 8 protein-coding common_peak2_81_474_0.296271873033472_9.03991963973505_2.74617520656389 chr7 29237496 29239136 + 2.74617520656389 NA promoter-TSS (NM_029887) promoter-TSS (NM_029887) -7 NM_001110201 77254 Mm.36699 NM_029887 ENSMUSG00000030588 Yif1b 9430029K10Rik|Yip1b Yip1 interacting factor homolog B (S. cerevisiae) protein-coding common_peak1_177_1699_-0.17168835107452_10.6454748554878_2.74604396988897 chr10 39478405 39480695 + 2.74604396988897 NA intron (NM_008054, intron 3 of 13) L3|LINE|CR1 109751 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_65_553_-0.309809907201952_8.95883721244821_2.74548611111927 chr1 91059387 91060415 + 2.74548611111927 NA intron (NM_001310732, intron 1 of 24) intron (NM_001310732, intron 1 of 24) 6457 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_75_646_-0.284033076222904_9.19560536388106_2.7448354445314 chr9 66304746 66306205 + 2.7448354445314 NA Intergenic Intergenic -44975 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak1_17_142_-0.655185974905722_6.83227834932553_2.7448009899228 chr1 131022317 131022671 + 2.7448009899228 NA exon (NM_010548, exon 4 of 5) exon (NM_010548, exon 4 of 5) 2649 NM_010548 16153 Mm.874 NM_010548 ENSMUSG00000016529 Il10 CSIF|Il-10 interleukin 10 protein-coding common_peak1_17_142_-0.655185974905722_6.83227834932553_2.7448009899228-2 chr6 130126054 130126507 + 2.7448009899228 NA exon (NM_001101620, exon 3 of 8) exon (NM_001101620, exon 3 of 8) 3555 NM_010650 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding unique_peak2_17_142_-0.655185974905722_6.83227834932553_2.7448009899228 chr14 22140010 22141380 + 2.7448009899228 NA intron (NM_028275, intron 2 of 6) intron (NM_028275, intron 2 of 6) 120983 NM_028275 76633 Mm.489898 NM_028275 ENSMUSG00000063458 1700112E06Rik 2700009F18Rik RIKEN cDNA 1700112E06 gene protein-coding unique_peak2_17_142_-0.655185974905722_6.83227834932553_2.7448009899228-2 chr6 143169633 143170684 + 2.7448009899228 NA intron (NM_029250, intron 1 of 7) intron (NM_029250, intron 1 of 7) 2928 NM_029250 75320 Mm.272548 NM_029250 ENSMUSG00000030275 Etnk1 1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1 ethanolamine kinase 1 protein-coding common_peak2_185_1788_-0.167508639977962_10.7211833520629_2.74456968202088 chr2 152225914 152227865 + 2.74456968202088 NA promoter-TSS (NM_007788) promoter-TSS (NM_007788) 49 NM_007788 12995 Mm.23692 NM_007788 ENSMUSG00000074698 Csnk2a1 Csnk2a1-rs4 casein kinase 2, alpha 1 polypeptide protein-coding common_peak2_203_1990_-0.158382106220333_10.8800864526103_2.74391330007661 chr19 44246859 44249706 + 2.74391330007661 NA Intergenic CpG 44994 NM_024450 30049 Mm.480594 NM_024450 ENSMUSG00000025202 Scd3 4930513N16Rik stearoyl-coenzyme A desaturase 3 protein-coding common_peak1_38_167_0.4806260268291_7.63263043619331_2.74332615184717 chr4 135019448 135020320 + 2.74332615184717 NA Intergenic Intergenic 88904 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding common_peak1_32_131_0.532925828302426_7.31085703350967_2.74301078862937-3 chr9 92266077 92266598 + 2.74301078862937 NA TTS (NR_105808) TTS (NR_105808) 1024 NR_105808 102465203 NR_105808 ENSMUSG00000098766 Mir6386 Gm27842|mmu-mir-6386 microRNA 6386 ncRNA common_peak1_32_131_0.532925828302426_7.31085703350967_2.74301078862937 chr11 11731640 11732280 + 2.74301078862937 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 41783 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_32_131_0.532925828302426_7.31085703350967_2.74301078862937-2 chr19 44314075 44314882 + 2.74301078862937 NA Intergenic Intergenic 11307 NR_039574 100628619 NR_039574 ENSMUSG00000093315 Mir5114 mmu-mir-5114|mu-mir-5114 microRNA 5114 ncRNA common_peak1_153_1101_0.197425343388264_10.2046211802653_2.74245129747694 chr8 13685333 13687441 + 2.74245129747694 NA Intergenic L1MD1|LINE|L1 -8800 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_49_239_0.405736907714222_8.10975904946563_2.7423163503891 chr12 83596713 83597883 + 2.7423163503891 NA promoter-TSS (NM_183154) promoter-TSS (NM_183154) -151 NM_183154 217695 Mm.59257 NM_183154 ENSMUSG00000042628 Zfyve1 DFCP1|G630053K23|TAFF1|ZNFN2A1|mKIAA1589 zinc finger, FYVE domain containing 1 protein-coding common_peak1_99_879_-0.242119899015565_9.66029976401688_2.74224051631022 chr8 22192697 22193625 + 2.74224051631022 NA intron (NM_027338, intron 1 of 13) CpG 301 NM_027338 70160 Mm.41453 NM_027338 ENSMUSG00000031479 Vps36 1700010A24Rik|2210415M20Rik|2810408E15Rik|Eap45 vacuolar protein sorting 36 protein-coding common_peak1_28_108_0.580478989735642_7.05842381964475_2.74182610407467-2 chr2 125247278 125247803 + 2.74182610407467 NA promoter-TSS (NM_023595) promoter-TSS (NM_023595) 25 NM_023595 110074 Mm.282499 NM_023595 ENSMUSG00000027203 Dut 5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase deoxyuridine triphosphatase protein-coding common_peak1_28_108_0.580478989735642_7.05842381964475_2.74182610407467 chr17 34200993 34201641 + 2.74182610407467 NA 3' UTR (NM_010724, exon 6 of 6) 3' UTR (NM_010724, exon 6 of 6) 3122 NM_010724 16913 Mm.180191 NM_010724 ENSMUSG00000024338 Psmb8 Lmp-7|Lmp7 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) protein-coding common_peak1_56_287_0.374573718107861_8.35721186049624_2.74132830355449 chr10 68199640 68200357 + 2.74132830355449 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 78728 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_94_830_-0.250234876495133_9.57358722852278_2.74121068882618 chr19 10978809 10979987 + 2.74121068882618 NA intron (NM_001034898, intron 6 of 6) intron (NM_001034898, intron 6 of 6) -4728 NM_023529 69826 Mm.273404 NM_023529 ENSMUSG00000024731 Ms4a10 2010001N17Rik membrane-spanning 4-domains, subfamily A, member 10 protein-coding common_peak2_64_544_-0.313197899331392_8.93351346999859_2.74113352646948 chr9 108628448 108631544 + 2.74113352646948 NA intron (NM_011790, intron 3 of 15) intron (NM_011790, intron 3 of 15) 19384 NM_011790 23807 Mm.290447 NM_011790 ENSMUSG00000064145 Arih2 AI843547|ARI2|TRIAD1|UIP48 ariadne RBR E3 ubiquitin protein ligase 2 protein-coding common_peak1_137_953_0.21136217542764_10.0035265437193_2.74104025624975 chr11 88998733 89000807 + 2.74104025624975 NA exon (NM_009546, exon 1 of 9) exon (NM_009546, exon 1 of 9) 367 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding common_peak2_53_266_0.388123946338396_8.25475790485675_2.74087047974876 chr19 5211100 5212389 + 2.74087047974876 NA intron (NM_153129, intron 1 of 23) intron (NM_153129, intron 1 of 23) 61375 NM_153129 107975 Mm.234923 NM_153129 ENSMUSG00000024855 Pacs1 AI325977 phosphofurin acidic cluster sorting protein 1 protein-coding common_peak2_212_1681_0.161332071745157_10.7966280261277_2.74079958960344 chr9 21461775 21465103 + 2.74079958960344 NA intron (NM_007871, intron 2 of 19) intron (NM_007871, intron 2 of 19) 33125 NR_029585 387194 NR_029585 ENSMUSG00000065547 Mir199a-1 Mirn199|Mirn199a-1|mir-199a-1 microRNA 199a-1 ncRNA common_peak1_31_254_-0.471487862547334_7.75860950558519_2.74075115091102-2 chr13 91483659 91484307 + 2.74075115091102 NA intron (NM_024186, intron 1 of 15) intron (NM_024186, intron 1 of 15) 22886 NM_024186 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding common_peak1_31_254_-0.471487862547334_7.75860950558519_2.74075115091102 chr1 171044229 171044842 + 2.74075115091102 NA Intergenic Intergenic 14868 NM_010188 14131 Mm.22119 NM_010188 ENSMUSG00000059498 Fcgr3 CD16 Fc receptor, IgG, low affinity III protein-coding common_peak1_31_254_-0.471487862547334_7.75860950558519_2.74075115091102-3 chr9 56265976 56266537 + 2.74075115091102 NA intron (NM_172924, intron 3 of 6) intron (NM_172924, intron 3 of 6) -105186 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_338_3605_-0.116529667106658_11.757918847879_2.74043646092206 chr10 39730749 39733294 + 2.74043646092206 NA promoter-TSS (NM_011264) promoter-TSS (NM_011264) -14 NR_038037 327744 Mm.295265 NM_183198 ENSMUSG00000087177 E130307A14Rik - RIKEN cDNA E130307A14 gene ncRNA common_peak2_59_309_0.359144338509822_8.45569657452915_2.74034420329245 chr5 8541672 8543803 + 2.74034420329245 NA intron (NM_198620, intron 6 of 9) intron (NM_198620, intron 6 of 9) 80215 NM_198620 242819 Mm.332192 NM_198620 ENSMUSG00000040570 Rundc3b Gm440 RUN domain containing 3B protein-coding common_peak2_54_273_0.383258935425388_8.28966155067322_2.74033690239501 chr17 48466488 48468569 + 2.74033690239501 NA exon (NM_152823, exon 9 of 9) exon (NM_152823, exon 9 of 9) 12627 NM_152823 76589 Mm.311629 NM_152823 ENSMUSG00000043592 Unc5cl 2510009H09Rik|BB155270|Zud unc-5 family C-terminal like protein-coding common_peak1_14_38_0.896641902549099_5.7337231701368_2.73885432927896-2 chr6 130093814 130094172 + 2.73885432927896 NA intron (NM_013793, intron 3 of 7) B1_Mus1|SINE|Alu -26722 NM_001252577 16635 Mm.333431 NM_010649 ENSMUSG00000079852 Klra4 Chok|Klra32|Klra33|Ly-49d|Ly49d|ly49r<129> killer cell lectin-like receptor, subfamily A, member 4 protein-coding unique_peak1_14_38_0.896641902549099_5.7337231701368_2.73885432927896 chr10 75414826 75415234 + 2.73885432927896 NA exon (NM_133995, exon 3 of 10) exon (NM_133995, exon 3 of 10) 8119 NM_133995 103149 Mm.441195 NM_133995 ENSMUSG00000033427 Upb1 AI195023 ureidopropionase, beta protein-coding common_peak1_14_38_0.896641902549099_5.7337231701368_2.73885432927896 chr19 29642123 29642488 + 2.73885432927896 NA intron (NM_001081213, intron 2 of 14) intron (NM_001081213, intron 2 of 14) 6115 NM_001081213 226090 Mm.267131 NM_146098 ENSMUSG00000046324 Ermp1 D19Ertd410e|D19Wsu12e|Fxna|mKIAA1815 endoplasmic reticulum metallopeptidase 1 protein-coding common_peak2_50_246_0.399303545542779_8.14801900435607_2.7386330154307 chr6 122763838 122765289 + 2.7386330154307 NA Intergenic CpG -21818 NM_011401 20527 Mm.395108 NM_011401 ENSMUSG00000003153 Slc2a3 AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3 solute carrier family 2 (facilitated glucose transporter), member 3 protein-coding common_peak1_181_1370_0.177944498127177_10.5099851048428_2.73804482359349 chr7 80401343 80403474 + 2.73804482359349 NA intron (NM_001081454, intron 1 of 15) CpG 404 NM_011046 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak2_650_7003_0.080389461719502_12.8141580992933_2.73692791129772 chr15 96283694 96289767 + 2.73692791129772 NA promoter-TSS (NM_175251) promoter-TSS (NM_175251) -792 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding common_peak2_80_467_0.295977363409474_9.01835340128814_2.73611623847155 chr7 78737000 78738841 + 2.73611623847155 NA Intergenic L1ME1|LINE|L1 -19700 NR_015542 414121 Mm.482537 NR_015542 ENSMUSG00000059146 E430016F16Rik - RIKEN cDNA E430016F16 gene ncRNA common_peak2_51_253_0.393348869055123_8.18535912129973_2.73588379061564 chr11 89024259 89025366 + 2.73588379061564 NA Intergenic B2_Mm2|SINE|B2 25409 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding common_peak1_46_382_-0.37806949449894_8.39216583467549_2.73550770616726 chr9 118481596 118482573 + 2.73550770616726 NA exon (NM_001164789, exon 4 of 6) exon (NM_001164789, exon 4 of 6) 3895 NM_010136 13813 Mm.200692 NM_010136 ENSMUSG00000032446 Eomes C77258|TBR-2|Tbr2 eomesodermin protein-coding common_peak1_61_516_-0.320725954394272_8.8536574931178_2.73517107170021 chr15 77830037 77831291 + 2.73517107170021 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 11511 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_22_76_0.671674263398609_6.60262367239421_2.73439864765071-3 chr7 38226164 38226740 + 2.73439864765071 NA intron (NM_024413, intron 1 of 1) intron (NM_024413, intron 1 of 1) 1542 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding common_peak1_22_76_0.671674263398609_6.60262367239421_2.73439864765071-2 chr6 123288836 123289383 + 2.73439864765071 NA intron (NM_019948, intron 1 of 5) intron (NM_019948, intron 1 of 5) 762 NM_019948 56619 Mm.248327 NM_019948 ENSMUSG00000030142 Clec4e C86253|Clecsf9|Mincle C-type lectin domain family 4, member e protein-coding common_peak1_22_76_0.671674263398609_6.60262367239421_2.73439864765071 chr1 91090435 91090855 + 2.73439864765071 NA intron (NM_001310732, intron 10 of 24) intron (NM_001310732, intron 10 of 24) 37201 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_22_76_0.671674263398609_6.60262367239421_2.73439864765071 chr15 97816069 97816721 + 2.73439864765071 NA intron (NM_001204275, intron 1 of 24) MTD|LTR|ERVL-MaLR -1532 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_37_304_-0.425688917867002_8.03982097351675_2.73420599887821 chr6 28479303 28480202 + 2.73420599887821 NA promoter-TSS (NM_019776) promoter-TSS (NM_019776) -596 NM_019776 56463 Mm.439987 NM_019776 ENSMUSG00000001424 Snd1 AL033314|Tudor-SN staphylococcal nuclease and tudor domain containing 1 protein-coding unique_peak2_37_304_-0.425688917867002_8.03982097351675_2.73420599887821 chr7 135597734 135599431 + 2.73420599887821 NA intron (NM_001316680, intron 1 of 20) intron (NM_001316680, intron 1 of 20) 5101 NM_001316680 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak2_48_399_-0.366979952864041_8.46036621334271_2.73342664426943 chr17 56268641 56270081 + 2.73342664426943 NA TTS (NM_174989) TTS (NM_174989) 7406 NM_174989 106759 Mm.203952 NM_174989 ENSMUSG00000047123 Ticam1 AW046014|AW547018|TICAM-1|TRIF toll-like receptor adaptor molecule 1 protein-coding common_peak1_155_1120_0.195597509175148_10.228369317393_2.73236558843007 chr11 103343732 103345497 + 2.73236558843007 NA promoter-TSS (NR_045346) promoter-TSS (NR_045346) 88 NM_133715 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak2_258_2628_-0.136978666141164_11.2918090935475_2.73208801074618 chr3 75555538 75558025 + 2.73208801074618 NA promoter-TSS (NM_009250) promoter-TSS (NM_009250) 71 NM_019745 56426 Mm.316473 NM_019745 ENSMUSG00000027835 Pdcd10 2410003B13Rik|Ccm3|Tfa15|Tfar15 programmed cell death 10 protein-coding unique_peak2_57_479_-0.331614969909593_8.74108311065372_2.731284855206 chr18 38584186 38586965 + 2.731284855206 NA TTS (NM_011898) TTS (NM_011898) 15693 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty homolog 4 (Drosophila) protein-coding common_peak1_133_1225_-0.202587252354702_10.1584496375134_2.73050644612926 chr10 80663000 80665200 + 2.73050644612926 NA Intergenic Intergenic -7029 NM_145361 208198 Mm.60720 NM_145361 ENSMUSG00000003344 Btbd2 2610037C03Rik|4930512K17Rik BTB (POZ) domain containing 2 protein-coding common_peak2_52_434_-0.349129825292978_8.5903066780896_2.73024303773014 chr7 139142746 139144983 + 2.73024303773014 NA intron (NM_001162540, intron 1 of 11) PB1D9|SINE|Alu 44630 NM_021302 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding common_peak1_52_434_-0.349129825292978_8.5903066780896_2.73024303773014 chr18 80684646 80685405 + 2.73024303773014 NA intron (NM_198429, intron 2 of 9) RSINE1|SINE|B4 23148 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_56_470_-0.335084530062611_8.71204098458148_2.73005842617 chr11 70197161 70198580 + 2.73005842617 NA Intergenic B2_Mm2|SINE|B2 -16040 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak1_59_498_-0.3276272615532_8.79908237456066_2.72960483299396 chr11 59449749 59450911 + 2.72960483299396 NA promoter-TSS (NM_144521) promoter-TSS (NM_144521) 285 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding common_peak2_101_637_0.256870474548943_9.44584785103934_2.72951791390061 chr6 128361947 128363434 + 2.72951791390061 NA promoter-TSS (NM_008021) promoter-TSS (NM_008021) 132 NR_027360 72440 Mm.143908 NM_197981 ENSMUSG00000048668 Rhno1 2510047L19Rik|5930416I19Rik RAD9-HUS1-RAD1 interacting nuclear orphan 1 protein-coding common_peak1_53_443_-0.345595988324154_8.62161787218803_2.72936746823171 chr5 110135773 110136487 + 2.72936746823171 NA exon (NM_001289578, exon 2 of 17) exon (NM_001289578, exon 2 of 17) 300 NM_001289578 231600 Mm.30264 NM_172717 ENSMUSG00000014668 Chfr 5730484M20Rik|C230082M18|RNF116 checkpoint with forkhead and ring finger domains protein-coding common_peak1_149_1394_-0.189287387240526_10.3514057130963_2.72905007932548 chr14 16248994 16250223 + 2.72905007932548 NA 5' UTR (NM_027695, exon 1 of 3) 5' UTR (NM_027695, exon 1 of 3) 200 NM_027695 71147 Mm.197960 NM_027695 ENSMUSG00000021786 Oxsm 4933425A18Rik|C80494 3-oxoacyl-ACP synthase, mitochondrial protein-coding common_peak1_38_312_-0.417075397324758_8.08148114827024_2.72896867913874-2 chr2 181864426 181864965 + 2.72896867913874 NA intron (NM_025901, intron 1 of 2) CpG 335 NM_025901 67005 Mm.271986 NM_025901 ENSMUSG00000038628 Polr3k 12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11 polymerase (RNA) III (DNA directed) polypeptide K protein-coding common_peak1_38_312_-0.417075397324758_8.08148114827024_2.72896867913874 chr18 12640718 12641418 + 2.72896867913874 NA Intergenic Intergenic -2465 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding common_peak2_85_506_0.286497544436964_9.12909070922182_2.72845042186574 chr11 70773398 70775842 + 2.72845042186574 NA Intergenic Intergenic 10173 NM_177565 193043 Mm.40966 NM_177565 ENSMUSG00000043602 Zfp3 AI854635|B230309J24|Fnp-1|Zfp-3 zinc finger protein 3 protein-coding common_peak2_85_506_0.286497544436964_9.12909070922182_2.72845042186574-2 chr13 32902817 32905594 + 2.72845042186574 NA Intergenic (TTTA)n|Simple_repeat|Simple_repeat -6065 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak1_32_262_-0.461599041631422_7.80811946847659_2.72744398972385 chr11 54972810 54973465 + 2.72744398972385 NA Intergenic Intergenic -10197 NM_001271455 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak1_58_489_-0.331111533960746_8.7710821720222_2.72740384624299 chr11 116405409 116406327 + 2.72740384624299 NA intron (NM_027258, intron 1 of 18) B3|SINE|B2 7164 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_58_489_-0.331111533960746_8.7710821720222_2.72740384624299-2 chr15 100468448 100469265 + 2.72740384624299 NA promoter-TSS (NM_134093) promoter-TSS (NM_134093) -178 NM_134093 68614 Mm.275272 NM_134093 ENSMUSG00000037353 Letmd1 1110019O13Rik|AI593524|BB130465|BB235638|HCCR-2|HCCR1|MCC-32|Mccr LETM1 domain containing 1 protein-coding common_peak1_86_751_-0.261791021011785_9.42369334117175_2.7272829979455 chr9 37229744 37230825 + 2.7272829979455 NA 3' UTR (NM_020258, exon 18 of 18) 3' UTR (NM_020258, exon 18 of 18) 21968 NM_001310096 66279 Mm.41451 NM_025464 ENSMUSG00000032121 Tmem218 1810021J13Rik|AV004931 transmembrane protein 218 protein-coding common_peak2_340_3082_0.119944443754983_11.6500913959847_2.7265429641583 chr8 25067096 25072014 + 2.7265429641583 NA intron (NM_031257, intron 3 of 11) intron (NM_031257, intron 3 of 11) -30593 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding unique_peak2_33_137_0.521624115382358_7.36933651446935_2.72649355796539 chr5 118380557 118381647 + 2.72649355796539 NA Intergenic G-rich|Low_complexity|Low_complexity 135875 NM_001081236 76792 Mm.103428 NM_001081236 ENSMUSG00000032840 2410131K14Rik - RIKEN cDNA 2410131K14 gene protein-coding common_peak1_71_608_-0.292388433660953_9.10410420107586_2.72635938930451 chr13 37853927 37855014 + 2.72635938930451 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) 27077 NM_001039188 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_142_999_0.20640606192034_10.0689873156223_2.72624056595378 chr14 32159118 32160828 + 2.72624056595378 NA promoter-TSS (NM_001033988) promoter-TSS (NM_001033988) 86 NM_001033988 27057 Mm.371598 NM_019744 ENSMUSG00000056234 Ncoa4 ARA70|Rfg nuclear receptor coactivator 4 protein-coding common_peak1_142_999_0.20640606192034_10.0689873156223_2.72624056595378-2 chr4 32799603 32801074 + 2.72624056595378 NA promoter-TSS (NM_175364) promoter-TSS (NM_175364) 79 NM_175364 108755 Mm.1182 NM_175364 ENSMUSG00000045854 Lyrm2 2610208E05Rik LYR motif containing 2 protein-coding common_peak1_78_451_0.301920128698129_8.97113902676425_2.72601335730149 chr8 128550281 128551259 + 2.72601335730149 NA Intergenic Intergenic -134884 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_69_382_0.326857443784933_8.74462930381742_2.72562168966811 chr5 120587735 120588818 + 2.72562168966811 NA promoter-TSS (NM_029408) promoter-TSS (NM_029408) 337 NM_145853 252972 Mm.114054 NM_145853 ENSMUSG00000032741 Tpcn1 5730403B01Rik|Tpc1|mKIAA1169 two pore channel 1 protein-coding common_peak2_39_174_0.466535426984803_7.68447882532473_2.72557041959197 chr4 128733821 128735012 + 2.72557041959197 NA intron (NM_001195083, intron 1 of 6) intron (NM_001195083, intron 1 of 6) 6845 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic-like 2 (Drosophila) protein-coding unique_peak2_28_229_-0.496826736431807_7.59707668272847_2.72555499760501 chr9 44514921 44516264 + 2.72555499760501 NA intron (NM_007551, intron 1 of 1) intron (NM_007551, intron 1 of 1) 10829 NM_007551 12145 Mm.6246 NM_007551 ENSMUSG00000047880 Cxcr5 Blr1|CXC-R5|CXCR-5|Gpcr6|MDR15 chemokine (C-X-C motif) receptor 5 protein-coding common_peak2_28_229_-0.496826736431807_7.59707668272847_2.72555499760501 chr10 20834587 20835875 + 2.72555499760501 NA Intergenic L1M2|LINE|L1 -110163 NM_013875 29863 Mm.425617 NM_013875 ENSMUSG00000019990 Pde7b - phosphodiesterase 7B protein-coding common_peak2_28_229_-0.496826736431807_7.59707668272847_2.72555499760501-2 chr4 88793529 88794600 + 2.72555499760501 NA promoter-TSS (NM_001161609) promoter-TSS (NM_001161609) 322 NM_001085533 545652 Mm.457965 NM_001085533 ENSMUSG00000099518 Gm13275 OTTMUSG00000011268 predicted gene 13275 protein-coding common_peak1_28_229_-0.496826736431807_7.59707668272847_2.72555499760501 chr13 38010159 38010887 + 2.72555499760501 NA intron (NM_027724, intron 11 of 12) intron (NM_027724, intron 11 of 12) -16333 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding common_peak2_51_426_-0.356058703793202_8.56006290772389_2.72530569970885 chr10 21234695 21236251 + 2.72530569970885 NA Intergenic Intergenic -60506 NM_001042593 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak2_105_671_0.250036653850708_9.51733574970411_2.72432924717051 chr8 36247723 36250220 + 2.72432924717051 NA exon (NM_001081150, exon 1 of 12) exon (NM_001081150, exon 1 of 12) 545 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding common_peak2_25_92_0.616262433532901_6.84729002787448_2.72366481613647 chr6 119346073 119347009 + 2.72366481613647 NA intron (NM_001033382, intron 34 of 37) intron (NM_001033382, intron 34 of 37) -15775 NM_172492 211187 Mm.121498 NM_172492 ENSMUSG00000055003 Lrtm2 A230084J22|AI841794 leucine-rich repeats and transmembrane domains 2 protein-coding unique_peak2_25_92_0.616262433532901_6.84729002787448_2.72366481613647 chr6 91123208 91123855 + 2.72366481613647 NA Intergenic Intergenic -6705 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak1_25_92_0.616262433532901_6.84729002787448_2.72366481613647 chr1 184533864 184534491 + 2.72366481613647 NA intron (NR_040472, intron 2 of 5) intron (NR_040472, intron 2 of 5) 23514 NR_040472 73590 Mm.82792 NR_040472 ENSMUSG00000101574 1700112H15Rik - RIKEN cDNA 1700112H15 gene ncRNA common_peak2_101_898_-0.237894217200635_9.69323019691413_2.72323513939648 chr9 106202743 106204744 + 2.72323513939648 NA intron (NM_011876, intron 1 of 8) intron (NM_011876, intron 1 of 8) 635 NM_011876 23999 Mm.274346 NM_011876 ENSMUSG00000023277 Twf2 A6-related|AU014993|Ptk9l|Ptk9r twinfilin actin binding protein 2 protein-coding common_peak1_154_1111_0.19584671888912_10.2168644321681_2.72194605663518 chr6 82652066 82653604 + 2.72194605663518 NA promoter-TSS (NM_025882) promoter-TSS (NM_025882) 30 NM_025882 66979 Mm.195753 NM_025882 ENSMUSG00000030042 Pole4 2400007P05Rik|5830430F06Rik polymerase (DNA-directed), epsilon 4 (p12 subunit) protein-coding common_peak1_151_1083_0.198052095602087_10.1811750891549_2.72181768412099 chr16 24150592 24152330 + 2.72181768412099 NA Intergenic Intergenic -162849 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_121_810_0.227573658016055_9.7773449332253_2.72181732747932 chr16 8738448 8739631 + 2.72181732747932 NA promoter-TSS (NM_001003918) promoter-TSS (NM_001003918) -697 NM_001003918 252870 Mm.295330 NM_001003918 ENSMUSG00000022710 Usp7 2210010O09Rik|AA409944|AA617399|AU019296|AW548146|C80752|Hausp ubiquitin specific peptidase 7 protein-coding common_peak2_40_180_0.46159737798222_7.73064457607432_2.72140813369873-2 chr19 32485330 32486542 + 2.72140813369873 NA 5' UTR (NM_010799, exon 1 of 5) 5' UTR (NM_010799, exon 1 of 5) 167 NM_010799 17330 Mm.255116 NM_010799 ENSMUSG00000024896 Minpp1 AA408516 multiple inositol polyphosphate histidine phosphatase 1 protein-coding common_peak2_40_180_0.46159737798222_7.73064457607432_2.72140813369873 chr15 35155196 35155925 + 2.72140813369873 NA 5' UTR (NM_019635, exon 1 of 11) 5' UTR (NM_019635, exon 1 of 11) 246 NM_019635 56274 Mm.262330 NM_019635 ENSMUSG00000022329 Stk3 0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1 serine/threonine kinase 3 protein-coding common_peak1_190_1460_0.171631043183297_10.5985559843951_2.72115957034783 chr8 69973402 69975281 + 2.72115957034783 NA promoter-TSS (NM_001113346) promoter-TSS (NM_001113346) 42 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak2_177_1698_-0.170839457233676_10.6450504085674_2.72111509258103 chr11 69661584 69663599 + 2.72111509258103 NA promoter-TSS (NM_011900) promoter-TSS (NM_011900) 58 NR_125917 24070 Mm.89579 NM_011900 ENSMUSG00000018761 Mpdu1 LEC35|SL15|Supl15h mannose-P-dolichol utilization defect 1 protein-coding common_peak1_91_800_-0.253973005942488_9.51867192943747_2.72102837659122-2 chr9 72274490 72275835 + 2.72102837659122 NA intron (NM_001311105, intron 1 of 20) CpG 274 NM_001311105 235469 Mm.242791 NM_146224 ENSMUSG00000038535 Zfp280d A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d zinc finger protein 280D protein-coding common_peak1_91_800_-0.253973005942488_9.51867192943747_2.72102837659122 chr9 32508888 32510094 + 2.72102837659122 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 31961 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak2_70_599_-0.295659144648864_9.08098911817145_2.72012584669209 chr6 147475639 147477036 + 2.72012584669209 NA intron (NM_025911, intron 1 of 12) CpG 466 NM_025911 67015 Mm.209774 NM_025911 ENSMUSG00000030301 Ccdc91 1700086G08Rik|1810060J02Rik|AU045683|AW555238|p56 coiled-coil domain containing 91 protein-coding common_peak1_70_599_-0.295659144648864_9.08098911817145_2.72012584669209-2 chr9 54863684 54864345 + 2.72012584669209 NA intron (NM_022655, intron 1 of 21) CpG 259 NM_022655 64602 Mm.208991 NM_022655 ENSMUSG00000032293 Ireb2 D9Ertd85e|Irp2 iron responsive element binding protein 2 protein-coding common_peak1_70_599_-0.295659144648864_9.08098911817145_2.72012584669209 chr6 83791029 83792092 + 2.72012584669209 NA Intergenic Intergenic -3497 NM_019542 56174 Mm.190650 NM_019542 ENSMUSG00000034744 Nagk Gnk N-acetylglucosamine kinase protein-coding common_peak2_70_599_-0.295659144648864_9.08098911817145_2.72012584669209-2 chr9 99575206 99576712 + 2.72012584669209 NA exon (NM_031403, exon 1 of 8) exon (NM_031403, exon 1 of 8) 160 NM_031403 83703 Mm.31324 NM_031403 ENSMUSG00000032469 Dbr1 AW018415 debranching RNA lariats 1 protein-coding common_peak1_117_775_0.232225874041054_9.71602577920765_2.7196003508521 chr2 22894986 22896252 + 2.7196003508521 NA promoter-TSS (NM_019501) promoter-TSS (NM_019501) 97 NM_019501 56075 Mm.249752 NM_019501 ENSMUSG00000026784 Pdss1 2610203G20Rik|2700031G06Rik|TPT|TPT 1|Tprt|mDLP1|mSPS1 prenyl (solanesyl) diphosphate synthase, subunit 1 protein-coding common_peak2_90_547_0.27431295975952_9.23518856284029_2.71956350292761 chr2 131508239 131509908 + 2.71956350292761 NA intron (NM_145533, intron 1 of 6) intron (NM_145533, intron 1 of 6) 17211 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak1_145_1352_-0.19301478640455_10.3054387307743_2.71950568061852 chr1 161875263 161876823 + 2.71950568061852 NA intron (NM_172645, intron 1 of 23) intron (NM_172645, intron 1 of 23) 618 NM_172645 226551 Mm.170002 NM_172645 ENSMUSG00000040297 Suco 4732491B11|AI848100|AU016931|Opt SUN domain containing ossification factor protein-coding unique_peak2_22_181_-0.569333836105186_7.2231277221461_2.71873001882143 chr15 81199052 81199964 + 2.71873001882143 NA Intergenic Intergenic 8655 NR_015603 67638 Mm.390832 NM_026288 ENSMUSG00000047938 4930483J18Rik - RIKEN cDNA 4930483J18 gene ncRNA common_peak1_69_589_-0.296513118539314_9.05631458497955_2.71863106216079 chr15 73724773 73725591 + 2.71863106216079 NA 5' UTR (NM_001166388, exon 1 of 6) 5' UTR (NM_001166388, exon 1 of 6) 252 NM_001166388 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak1_151_1416_-0.18842290596206_10.374412589937_2.7177849334971 chr1 74386269 74387663 + 2.7177849334971 NA TTS (NM_013612) TTS (NM_013612) -4643 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding common_peak2_168_1244_0.185883821573967_10.3748719377424_2.7177849334971 chr9 57650247 57653425 + 2.7177849334971 NA 5' UTR (NM_001304761, exon 2 of 15) 5' UTR (NM_001304761, exon 2 of 15) 1795 NM_001304761 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak2_345_3141_0.118355377384711_11.6766451539866_2.71777560692622 chr1 80338014 80341832 + 2.71777560692622 NA intron (NM_001313728, intron 1 of 16) intron (NM_001313728, intron 1 of 16) 767 NM_001313728 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding unique_peak2_14_119_-0.724846474197171_6.54446735850993_2.71761044657128 chr15 64043187 64044322 + 2.71761044657128 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 16694 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_14_119_-0.724846474197171_6.54446735850993_2.71761044657128 chr2 31728184 31728618 + 2.71761044657128 NA intron (NM_001283047, intron 2 of 11) intron (NM_001283047, intron 2 of 11) -31538 NM_009594 11350 Mm.1318 NM_009594 ENSMUSG00000026842 Abl1 AI325092|Abl|E430008G22Rik|c-Abl c-abl oncogene 1, non-receptor tyrosine kinase protein-coding common_peak1_14_119_-0.724846474197171_6.54446735850993_2.71761044657128-2 chr2 174109913 174110254 + 2.71761044657128 NA promoter-TSS (NM_213733) promoter-TSS (NM_213733) -268 NM_213733 228961 Mm.295629 NM_213733 ENSMUSG00000039263 Npepl1 BC023239|C85514|mKIAA1974 aminopeptidase-like 1 protein-coding common_peak1_77_444_0.301894234940457_8.94860864332399_2.7164677680752 chr2 119662307 119663387 + 2.7164677680752 NA promoter-TSS (NM_027175) promoter-TSS (NM_027175) -49 NM_027175 69702 Mm.5390 NM_027175 ENSMUSG00000027305 Ndufaf1 2410001M24Rik|CGI-65|CIA30 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 protein-coding unique_peak1_18_56_0.767474189232149_6.21662710878082_2.71621815333348 chr10 75330238 75330780 + 2.71621815333348 NA intron (NM_009630, intron 2 of 2) intron (NM_009630, intron 2 of 2) 13632 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_18_56_0.767474189232149_6.21662710878082_2.71621815333348 chr1 51502491 51502916 + 2.71621815333348 NA Intergenic L2a|LINE|L2 -24304 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak1_18_56_0.767474189232149_6.21662710878082_2.71621815333348-5 chr9 64788221 64788556 + 2.71621815333348 NA Intergenic Intergenic -22623 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak1_18_56_0.767474189232149_6.21662710878082_2.71621815333348-3 chr5 125055604 125056059 + 2.71621815333348 NA exon (NM_001253905, exon 14 of 43) exon (NM_001253905, exon 14 of 43) 52356 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak1_18_56_0.767474189232149_6.21662710878082_2.71621815333348-2 chr13 45108598 45109073 + 2.71621815333348 NA Intergenic Intergenic -106739 NM_025772 94245 Mm.352311 NM_025772 ENSMUSG00000057531 Dtnbp1 5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy dystrobrevin binding protein 1 protein-coding common_peak1_18_56_0.767474189232149_6.21662710878082_2.71621815333348-6 chr9 65675856 65676254 + 2.71621815333348 NA promoter-TSS (NM_010952) promoter-TSS (NM_010952) -493 NM_010952 18247 Mm.116749 NM_010952 ENSMUSG00000040652 Oaz2 AZ-2|AZ2|Oaz2-ps|Sez15 ornithine decarboxylase antizyme 2 protein-coding common_peak1_18_56_0.767474189232149_6.21662710878082_2.71621815333348-2 chr1 59923309 59923717 + 2.71621815333348 NA intron (NM_001037725, intron 1 of 7) intron (NM_001037725, intron 1 of 7) 10507 NM_001037725 72750 Mm.258250 NM_001037725 ENSMUSG00000041040 Fam117b 2810425F24Rik|6330416D14Rik|Als2cr13 family with sequence similarity 117, member B protein-coding common_peak1_18_56_0.767474189232149_6.21662710878082_2.71621815333348-4 chr7 45236814 45237395 + 2.71621815333348 NA intron (NM_001290802, intron 4 of 8) intron (NM_001290802, intron 4 of 8) 1735 NM_007645 12493 Mm.3689 NM_007645 ENSMUSG00000030798 Cd37 Tspan26 CD37 antigen protein-coding common_peak1_39_321_-0.413170339297485_8.12433170846587_2.71612522240573 chr10 96338844 96339719 + 2.71612522240573 NA Intergenic Intergenic 113074 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_33_270_-0.452000469193344_7.8561488067572_2.71593272242691 chr3 75498496 75499186 + 2.71593272242691 NA Intergenic Intergenic 58011 NM_019745 56426 Mm.316473 NM_019745 ENSMUSG00000027835 Pdcd10 2410003B13Rik|Ccm3|Tfa15|Tfar15 programmed cell death 10 protein-coding unique_peak2_33_270_-0.452000469193344_7.8561488067572_2.71593272242691-2 chr2 173454304 173456083 + 2.71593272242691 NA Intergenic Intergenic -67399 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding unique_peak2_33_270_-0.452000469193344_7.8561488067572_2.71593272242691 chr13 42095226 42097000 + 2.71593272242691 NA intron (NM_007772, intron 2 of 8) intron (NM_007772, intron 2 of 8) 44092 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding unique_peak2_9_81_-0.893030088173664_5.91103696053125_2.71523212221742-3 chr2 166780609 166781397 + 2.71523212221742 NA Intergenic Intergenic -12764 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding unique_peak2_9_81_-0.893030088173664_5.91103696053125_2.71523212221742 chr15 11992164 11992998 + 2.71523212221742 NA intron (NM_011294, intron 2 of 4) intron (NM_011294, intron 2 of 4) 3426 NM_011294 20024 Mm.41746 NM_011294 ENSMUSG00000022205 Sub1 AI842364|P15|P9|Pc4|Rpo2tc1 SUB1 homolog (S. cerevisiae) protein-coding unique_peak2_9_81_-0.893030088173664_5.91103696053125_2.71523212221742-4 chr9 40343389 40343901 + 2.71523212221742 NA TTS (NR_040728) TTS (NR_040728) 10173 NR_040728 73558 Mm.398307 NR_040728 1700110K17Rik - RIKEN cDNA 1700110K17 gene ncRNA unique_peak2_9_81_-0.893030088173664_5.91103696053125_2.71523212221742-2 chr17 71551708 71552427 + 2.71523212221742 NA promoter-TSS (NM_001142631) promoter-TSS (NM_001142631) 6 NM_029254 70891 Mm.477599 NM_029254 ENSMUSG00000052525 Spdya 4921517J08Rik|4930548B21Rik|GS4|MLZ-465|Spdy1 speedy/RINGO cell cycle regulator family, member A protein-coding common_peak1_113_1019_-0.223242406122328_9.88273223379769_2.71518517912984 chr2 78977107 78979523 + 2.71518517912984 NA Intergenic Intergenic 109268 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_20_66_0.711385453340726_6.42178191712813_2.71517481040241 chr1 161782585 161783015 + 2.71517481040241 NA intron (NM_010177, intron 3 of 3) intron (NM_010177, intron 3 of 3) 5695 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_20_66_0.711385453340726_6.42178191712813_2.71517481040241-3 chr3 104790577 104791044 + 2.71517481040241 NA intron (NM_001291859, intron 1 of 4) intron (NM_001291859, intron 1 of 4) 1776 NM_007484 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding common_peak1_20_66_0.711385453340726_6.42178191712813_2.71517481040241-2 chr13 54217919 54218369 + 2.71517481040241 NA intron (NM_001010973, intron 2 of 2) intron (NM_001010973, intron 2 of 2) 26015 NM_008286 15466 Mm.57243 NM_008286 ENSMUSG00000034987 Hrh2 - histamine receptor H2 protein-coding common_peak1_202_1580_0.165577771419668_10.7094105380682_2.71468641857417 chr8 111940053 111941503 + 2.71468641857417 NA promoter-TSS (NM_026693) promoter-TSS (NM_026693) 75 NM_026693 93739 Mm.371666 NM_026693 ENSMUSG00000031950 Gabarapl2 0610012F20Rik|2900019O08Rik|AI173605|GATE-16|Gef2 gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 protein-coding common_peak2_29_114_0.563166381653328_7.12707324177104_2.71460987754034 chr2 128155828 128156768 + 2.71460987754034 NA intron (NM_009754, intron 3 of 3) intron (NM_009754, intron 3 of 3) 28723 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak1_29_114_0.563166381653328_7.12707324177104_2.71460987754034 chr11 118243507 118244182 + 2.71460987754034 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 4748 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_29_114_0.563166381653328_7.12707324177104_2.71460987754034-2 chr12 33131904 33132487 + 2.71460987754034 NA intron (NR_015602, intron 4 of 5) intron (NR_015602, intron 4 of 5) 15391 NR_015602 320046 Mm.208337 NR_015602 ENSMUSG00000052125 F730043M19Rik - RIKEN cDNA F730043M19 gene ncRNA common_peak2_90_790_-0.255188841752744_9.49993946359642_2.71454757221681 chr9 46282123 46283752 + 2.71454757221681 NA promoter-TSS (NM_146000) promoter-TSS (NM_146000) -75 NM_146000 215051 Mm.32648 NM_146000 ENSMUSG00000032077 Bud13 AV305342|D030060M11Rik BUD13 homolog protein-coding common_peak1_34_143_0.511520713081222_7.42568535798292_2.71248646725274 chr16 22439044 22439607 + 2.71248646725274 NA intron (NM_023794, intron 1 of 12) CpG 245 NM_023794 104156 Mm.155708 NM_023794 ENSMUSG00000013089 Etv5 1110005E01Rik|8430401F14Rik|ERM ets variant 5 protein-coding unique_peak2_25_205_-0.531079282542287_7.42096088591208_2.71248646725274 chr12 24492948 24493973 + 2.71248646725274 NA Intergenic Intergenic -5121 NM_020614 21340 Mm.39082 NM_020614 ENSMUSG00000059669 Taf1b 4930408G01Rik|A230108M10Rik|TAFI68|Tafi86|p63 TATA-box binding protein associated factor, RNA polymerase I, B protein-coding common_peak2_89_539_0.275975351700156_9.21480327290091_2.71195736379855 chr6 8208684 8210124 + 2.71195736379855 NA 5' UTR (NM_145374, exon 1 of 12) 5' UTR (NM_145374, exon 1 of 12) 177 NM_145374 252875 Mm.257151 NM_145374 ENSMUSG00000042447 Mios C81488 missing oocyte, meiosis regulator, homolog (Drosophila) protein-coding common_peak1_89_539_0.275975351700156_9.21480327290091_2.71195736379855 chr13 33964587 33965738 + 2.71195736379855 NA intron (NM_001163239, intron 1 of 5) intron (NM_001163239, intron 1 of 5) 503 NM_001163241 18105 Mm.264036 NM_020282 ENSMUSG00000046949 Nqo2 NMO2|Nmor2|Ox2 NAD(P)H dehydrogenase, quinone 2 protein-coding common_peak1_83_491_0.288184760831971_9.08660688575523_2.71123446811467 chr5 124016765 124018145 + 2.71123446811467 NA intron (NM_177876, intron 1 of 3) (TTCA)n|Simple_repeat|Simple_repeat 14805 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak2_66_360_0.334688673262553_8.66319936351845_2.71111109393722 chr9 88547337 88548982 + 2.71111109393722 NA 5' UTR (NM_001142943, exon 1 of 6) 5' UTR (NM_001142943, exon 1 of 6) 139 NM_001163061 71640 Mm.259988 NM_001142943 ENSMUSG00000032425 Zfp949 4930422I07Rik zinc finger protein 949 protein-coding common_peak1_99_621_0.258469044378492_9.41000529231985_2.7110527034909 chr11 70435006 70436330 + 2.7110527034909 NA intron (NM_145429, intron 2 of 14) intron (NM_145429, intron 2 of 14) -2587 NR_106064 102465670 NR_106064 ENSMUSG00000099109 Mir7115 Gm27902|mmu-mir-7115 microRNA 7115 ncRNA common_peak1_16_47_0.818573760253016_5.99424938084766_2.71043851283094 chr10 61237354 61237795 + 2.71043851283094 NA intron (NM_001081127, intron 4 of 21) intron (NM_001081127, intron 4 of 21) 35864 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak2_221_1775_0.156114612200946_10.8724731724506_2.70946167881405 chr1 95312626 95314833 + 2.70946167881405 NA 5' UTR (NM_026321, exon 1 of 3) 5' UTR (NM_026321, exon 1 of 3) 101 NM_026321 67698 Mm.272705 NM_026321 ENSMUSG00000051185 Fam174a 2310044D20Rik|Fam174|Naa6|Tmem157 family with sequence similarity 174, member A protein-coding unique_peak2_10_89_-0.858667664822079_6.06251926391864_2.7093529658363 chr8 35447507 35448207 + 2.7093529658363 NA Intergenic Intergenic 47676 NM_026067 67276 Mm.207534 NM_026067 ENSMUSG00000031527 Eri1 3'hexo|3110010F15Rik|Thex1|eri-1 exoribonuclease 1 protein-coding unique_peak2_10_89_-0.858667664822079_6.06251926391864_2.7093529658363-2 chr9 92207441 92207998 + 2.7093529658363 NA intron (NM_001195693, intron 5 of 6) intron (NM_001195693, intron 5 of 6) 14783 NM_001195693 100504689 Mm.464262 NM_001195693 ENSMUSG00000095654 Plscr5 331000 phospholipid scramblase family, member 5 protein-coding common_peak2_189_1831_-0.164121686635376_10.7571429447793_2.70910273459336 chr8 25947886 25950913 + 2.70910273459336 NA intron (NM_029884, intron 14 of 17) intron (NM_029884, intron 14 of 17) 27345 NM_029884 52120 Mm.28326 NM_029884 ENSMUSG00000037260 Hgsnat 9430010M12Rik|AW208455|D8Ertd354e|Tmem76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding common_peak1_41_187_0.449498103307217_7.77933790333125_2.70750245804852-2 chr8 105880865 105881576 + 2.70750245804852 NA TTS (NM_026532) TTS (NM_026532) 339 NM_181594 234699 Mm.28979 NM_181594 ENSMUSG00000036270 Edc4 BC022641 enhancer of mRNA decapping 4 protein-coding common_peak1_41_187_0.449498103307217_7.77933790333125_2.70750245804852 chr6 52011876 52012556 + 2.70750245804852 NA intron (NM_018773, intron 1 of 12) intron (NM_018773, intron 1 of 12) 333 NM_018773 54353 Mm.221479 NM_018773 ENSMUSG00000059182 Skap2 2610021A10Rik|AA960083|BB137539|RA70|SKAP-HOM|Saps|Scap2|mSKAP55R src family associated phosphoprotein 2 protein-coding common_peak2_41_187_0.449498103307217_7.77933790333125_2.70750245804852 chr14 79301704 79302730 + 2.70750245804852 NA promoter-TSS (NM_025427) promoter-TSS (NM_025427) -582 NM_025427 66214 Mm.29811 NM_025427 ENSMUSG00000022018 Rgcc 1190002H23Rik|Rgc-32|Rgc32 regulator of cell cycle protein-coding common_peak2_29_237_-0.486161330710241_7.65173709795282_2.70698831494117 chr18 30272297 30273434 + 2.70698831494117 NA promoter-TSS (NM_181414) promoter-TSS (NM_181414) -31 NM_181414 225326 Mm.194127 NM_181414 ENSMUSG00000033628 Pik3c3 5330434F23Rik|Vps34 phosphoinositide-3-kinase, class 3 protein-coding common_peak1_228_2275_-0.146816947548409_11.0788763685324_2.70671956636891 chr9 37488215 37489841 + 2.70671956636891 NA promoter-TSS (NM_146222) promoter-TSS (NM_146222) -293 NM_146222 235184 Mm.127892 NM_146222 ENSMUSG00000042138 Msantd2 2810450G17Rik|9530092B10Rik Myb/SANT-like DNA-binding domain containing 2 protein-coding common_peak1_34_278_-0.442675597305653_7.90278351317636_2.70604853004148 chr13 21721924 21722572 + 2.70604853004148 NA exon (NM_178200, exon 1 of 1) exon (NM_178200, exon 1 of 1) 204 NM_178200 319186 Mm.277425 NM_178200 ENSMUSG00000096807 Hist1h2bm H2b-291b histone cluster 1, H2bm protein-coding common_peak2_42_193_0.445814328066823_7.82282000622054_2.70603191431747 chrX 167382110 167383243 + 2.70603191431747 NA promoter-TSS (NM_001313758) promoter-TSS (NM_001313758) 73 NM_026662 110639 Mm.272955 NM_026662 ENSMUSG00000025742 Prps2 2610101M19Rik|AA589463|AI464149|Prps-2 phosphoribosyl pyrophosphate synthetase 2 protein-coding common_peak1_26_97_0.607497722724387_6.9184587054774_2.70598479882675 chr12 26414803 26415271 + 2.70598479882675 NA promoter-TSS (NR_105856) promoter-TSS (NR_105856) -27 NR_105856 102466676 NR_105856 ENSMUSG00000098771 Mir6538 Gm27439|mmu-mir-6538 microRNA 6538 ncRNA common_peak1_18_149_-0.62845448709899_6.91459144694639_2.70598479882675 chr2 71786979 71787500 + 2.70598479882675 NA exon (NM_008397, exon 1 of 26) exon (NM_008397, exon 1 of 26) 300 NM_001277970 16403 Mm.225096 NM_008397 ENSMUSG00000027111 Itga6 5033401O05Rik|AI115430|Cd49f|VLA-6 integrin alpha 6 protein-coding unique_peak2_20_165_-0.597564787548427_7.07625703757271_2.70583416263578 chr11 23571811 23572964 + 2.70583416263578 NA Intergenic Intergenic -13545 NR_004857 100134990 Mm.247328 NR_004857 ENSMUSG00000085415 Gm12060 OTTMUSG00000005275 selenoprotein K pseudogene pseudo common_peak2_137_1267_-0.199131398706257_10.2087733307863_2.7054358913381 chr3 52876376 52879636 + 2.7054358913381 NA Intergenic Intergenic 49660 NR_040555 622124 Mm.389434 NR_040555 ENSMUSG00000104401 Gm20750 - predicted gene, 20750 ncRNA common_peak1_23_81_0.656223463474011_6.68566373635509_2.7046363487508-2 chr17 26980737 26981281 + 2.7046363487508 NA Intergenic MTEa|LTR|ERVL-MaLR 7830 NM_001005916 474156 Mm.328890 NM_001005916 ENSMUSG00000079605 Zbtb9 3930402F13Rik zinc finger and BTB domain containing 9 protein-coding unique_peak2_23_81_0.656223463474011_6.68566373635509_2.7046363487508 chr18 6484620 6485388 + 2.7046363487508 NA intron (NM_007935, intron 1 of 13) intron (NM_007935, intron 1 of 13) 5642 NR_035446 100316773 NR_035446 ENSMUSG00000084514 Mir1893 Mirn1893|mmu-mir-1893 microRNA 1893 ncRNA common_peak1_23_81_0.656223463474011_6.68566373635509_2.7046363487508-4 chr6 31116417 31116935 + 2.7046363487508 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -53583 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_23_81_0.656223463474011_6.68566373635509_2.7046363487508-3 chr19 36918980 36919416 + 2.7046363487508 NA exon (NM_028263, exon 2 of 2) exon (NM_028263, exon 2 of 2) 401 NM_028263 72514 Mm.41674 NM_028263 ENSMUSG00000047632 Fgfbp3 2610306H15Rik|Fgf-bp3 fibroblast growth factor binding protein 3 protein-coding common_peak1_23_81_0.656223463474011_6.68566373635509_2.7046363487508 chr1 127227991 127228486 + 2.7046363487508 NA intron (NM_145128, intron 1 of 17) intron (NM_145128, intron 1 of 17) 23252 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak2_75_645_-0.281801528924321_9.19448959023176_2.70450116413332 chr1 9699772 9701572 + 2.70450116413332 NA promoter-TSS (NM_001290397) promoter-TSS (NM_001290397) -463 NM_008651 17864 Mm.479 NM_008651 ENSMUSG00000025912 Mybl1 A-myb|G1-419-6|repro9 myeloblastosis oncogene-like 1 protein-coding common_peak1_41_338_-0.401054508151489_8.2046142090606_2.70294019723594 chr8 117481823 117482483 + 2.70294019723594 NA Intergenic L1_Mur3|LINE|L1 -16138 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak2_103_918_-0.235275184275391_9.72628345915134_2.70248073117136 chrX 162901121 162903139 + 2.70248073117136 NA promoter-TSS (NR_033143) promoter-TSS (NR_033143) -41 NR_033143 55936 Mm.2065 NM_018737 ENSMUSG00000031360 Ctps2 A830031M15Rik|AI326475|Ctpsh cytidine 5'-triphosphate synthase 2 protein-coding common_peak1_16_134_-0.673279336076659_6.7401759290125_2.70198956268895-2 chr16 32148767 32149177 + 2.70198956268895 NA intron (NM_146069, intron 2 of 3) IAPEz-int|LTR|ERVK 16504 NM_146069 224109 Mm.33498 NM_146069 ENSMUSG00000052384 Nrros E430025L02Rik|Lrcc33|Lrrc33 negative regulator of reactive oxygen species protein-coding common_peak1_16_134_-0.673279336076659_6.7401759290125_2.70198956268895-3 chr16 32658951 32659293 + 2.70198956268895 NA intron (NM_016788, intron 1 of 15) intron (NM_016788, intron 1 of 15) 9075 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os ENSMUSG00000075265|Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA common_peak1_16_134_-0.673279336076659_6.7401759290125_2.70198956268895 chr12 25437984 25438356 + 2.70198956268895 NA Intergenic Intergenic 308996 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_183_1764_-0.167154730505963_10.7018751029056_2.70191161464791 chr18 65394711 65397239 + 2.70191161464791 NA intron (NR_105742, intron 3 of 6) intron (NR_105742, intron 3 of 6) -2087 NM_001037294 225638 Mm.296528 NM_001037294 ENSMUSG00000032845 Alpk2 Gm549|Hak alpha-kinase 2 protein-coding common_peak2_65_552_-0.307203411387471_8.95753396454097_2.70190667271786 chr15 97963388 97964666 + 2.70190667271786 NA promoter-TSS (NM_201359) promoter-TSS (NM_201359) -202 NM_201359 380967 Mm.196630 NM_201359 ENSMUSG00000052369 Tmem106c AI046681|BC046621|D15Ertd405e transmembrane protein 106C protein-coding unique_peak2_42_346_-0.39306468232431_8.2422595114161_2.70189487006057 chr19 11361489 11362696 + 2.70189487006057 NA Intergenic Intergenic -13396 NM_001310331 666907 NM_001310331 ENSMUSG00000101389 Ms4a4a EG666907 membrane-spanning 4-domains, subfamily A, member 4A protein-coding common_peak2_42_346_-0.39306468232431_8.2422595114161_2.70189487006057 chr10 111233295 111234699 + 2.70189487006057 NA intron (NM_001003717, intron 3 of 22) intron (NM_001003717, intron 3 of 22) -64682 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding common_peak1_351_3211_0.116990809922061_11.7077515824783_2.7016641847792 chr1 165704946 165708986 + 2.7016641847792 NA intron (NM_178593, intron 1 of 6) intron (NM_178593, intron 1 of 6) 1128 NM_178593 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding common_peak1_26_212_-0.512502053386243_7.47845859353272_2.70071505274275 chr9 60991266 60991865 + 2.70071505274275 NA Intergenic Intergenic -25504 NR_040767 330956 Mm.207985 NR_040767 ENSMUSG00000111290 Gm5122 A430102L10 predicted gene 5122 ncRNA common_peak2_35_149_0.502478982563143_7.48005818177745_2.70071505274275 chr7 128297513 128298450 + 2.70071505274275 NA exon (NM_145590, exon 1 of 13) exon (NM_145590, exon 1 of 13) 150 NM_145590 233913 Mm.220880 NM_145590 ENSMUSG00000030780 BC017158 - cDNA sequence BC017158 protein-coding common_peak2_119_1080_-0.216269752764234_9.97001593135253_2.70048622541842 chr14 52278381 52280546 + 2.70048622541842 NA promoter-TSS (NM_172601) promoter-TSS (NM_172601) -68 NM_172601 76338 Mm.32870 NM_172601 ENSMUSG00000022159 Rab2b 1500012D09Rik|4930528G15Rik|A230002G14|D530043M21Rik RAB2B, member RAS oncogene family protein-coding common_peak2_93_572_0.26735206985547_9.29606736368464_2.70037970788252 chr2 135658516 135660220 + 2.70037970788252 NA Intergenic CpG -76148 NR_015544 320684 Mm.421433 NR_015544 ENSMUSG00000085631 9630028H03Rik - RIKEN cDNA 9630028H03 gene ncRNA common_peak2_63_338_0.344336422361536_8.57730967431711_2.69993027446949 chr7 116442755 116444030 + 2.69993027446949 NA promoter-TSS (NM_011083) promoter-TSS (NM_011083) 66 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide protein-coding common_peak1_152_1426_-0.186964326195023_10.3852874563783_2.69972452792829 chr8 69749315 69750411 + 2.69972452792829 NA promoter-TSS (NM_001200023) promoter-TSS (NM_001200023) 99 NM_001200023 620419 Mm.460423 NM_001200023 ENSMUSG00000092260 Zfp963 - zinc finger protein 963 protein-coding common_peak1_23_188_-0.548466956128978_7.28800894615658_2.69950078829376-2 chr5 140615239 140615758 + 2.69950078829376 NA TTS (NM_008494) TTS (NM_008494) 8157 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_23_188_-0.548466956128978_7.28800894615658_2.69950078829376 chr13 74316815 74317259 + 2.69950078829376 NA intron (NM_011051, intron 1 of 5) intron (NM_011051, intron 1 of 5) 289 NM_011051 18570 Mm.24254 NM_011051 ENSMUSG00000021576 Pdcd6 AV299538|Alg2|MA-3|PS2|alg-2 programmed cell death 6 protein-coding unique_peak2_23_188_-0.548466956128978_7.28800894615658_2.69950078829376 chr17 32414876 32416227 + 2.69950078829376 NA intron (NM_001271478, intron 4 of 4) intron (NM_001271478, intron 4 of 4) 5424 NM_021319 57757 Mm.86752 NM_021319 ENSMUSG00000079563 Pglyrp2 C730002N09Rik|PGRP-L|Pglyrpl|tagL peptidoglycan recognition protein 2 protein-coding unique_peak2_23_188_-0.548466956128978_7.28800894615658_2.69950078829376-2 chr4 95199321 95200556 + 2.69950078829376 NA Intergenic L2|LINE|L2 -147716 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_81_475_0.29323781294384_9.04143666977986_2.69916097875426 chr10 122814481 122816180 + 2.69916097875426 NA intron (NM_176919, intron 4 of 8) intron (NM_176919, intron 4 of 8) 136015 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak1_63_533_-0.311218046189675_8.90508690859272_2.69783962953584 chr3 129830636 129831678 + 2.69783962953584 NA 5' UTR (NM_026578, exon 1 of 7) 5' UTR (NM_026578, exon 1 of 7) 239 NM_026578 68147 Mm.24873 NM_026578 ENSMUSG00000028010 Gar1 AA409823|AI326794|C430047J18Rik|Nola1 GAR1 ribonucleoprotein protein-coding unique_peak2_63_533_-0.311218046189675_8.90508690859272_2.69783962953584 chr6 130310984 130313325 + 2.69783962953584 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -3793 NM_024470 79410 Mm.482592 NM_024470 Klra23 Ly-49W1|Ly-49W2|Ly49W killer cell lectin-like receptor subfamily A, member 23 protein-coding common_peak1_81_702_-0.269325302820752_9.32271822766216_2.69747551101003 chr2 178506260 178507216 + 2.69747551101003 NA Intergenic Intergenic 76223 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak2_64_543_-0.310548320917443_8.93218868079162_2.69723658394402-2 chr3 65391668 65392911 + 2.69723658394402 NA intron (NM_026155, intron 1 of 4) CpG 264 NM_026155 67437 Mm.232728 NM_026155 ENSMUSG00000027828 Ssr3 0610038P07Rik|AL022999|AU022074|AW553833|TRAPG signal sequence receptor, gamma protein-coding common_peak1_64_543_-0.310548320917443_8.93218868079162_2.69723658394402 chr4 41713022 41713804 + 2.69723658394402 NA intron (NM_027278, intron 1 of 1) CpG 104 NM_027278 69961 Mm.425182 NM_027278 ENSMUSG00000036114 Rpp25l 2810432D09Rik|AW987258|Rppl25 ribonuclease P/MRP 25 subunit-like protein-coding common_peak2_64_543_-0.310548320917443_8.93218868079162_2.69723658394402 chr17 56289205 56291933 + 2.69723658394402 NA promoter-TSS (NM_025836) promoter-TSS (NM_025836) -58 NM_025836 66905 Mm.311696 NM_025836 ENSMUSG00000024197 Plin3 1300012C15Rik|M6prbp1|Tip47 perilipin 3 protein-coding common_peak2_74_636_-0.284999853966633_9.17264963527298_2.69720151838637 chr15 102278757 102280284 + 2.69720151838637 NA promoter-TSS (NM_134100) promoter-TSS (NM_134100) 64 NM_134100 106073 Mm.287740 NM_134100 ENSMUSG00000045665 Mfsd5 AA409375|AW556797|D15Mgi27 major facilitator superfamily domain containing 5 protein-coding common_peak1_236_1932_0.149607685055367_10.9914297647389_2.69648402507725 chr8 105170155 105172014 + 2.69648402507725 NA intron (NM_022309, intron 1 of 5) CpG 410 NM_001161458 12400 Mm.2018 NM_022309 ENSMUSG00000031885 Cbfb AI893578|PEA2|PEBP2b|Pebp2|Pebpb2 core binding factor beta protein-coding common_peak1_44_206_0.432691680065306_7.90983279753198_2.69605477997621 chr6 83317062 83317564 + 2.69605477997621 NA intron (NM_008638, intron 1 of 7) CpG 291 NM_008638 17768 Mm.443 NM_008638 ENSMUSG00000005667 Mthfd2 AW558851|NMDMC methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase protein-coding unique_peak2_6_60_-1.09739720991767_5.38203873260405_2.69560598044942 chr9 117926278 117926710 + 2.69560598044942 NA Intergenic Intergenic -114028 NM_001286508 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding unique_peak2_73_413_0.312909004898442_8.84994145994855_2.69533692189128 chr2 32060293 32063232 + 2.69533692189128 NA Intergenic B1_Mus2|SINE|Alu 10816 NR_106135 102466844 NR_106135 ENSMUSG00000099075 Mir7674 Gm27563|mmu-mir-7674 microRNA 7674 ncRNA common_peak2_102_647_0.251697880892115_9.46569894333068_2.69520014053524 chr5 108065126 108066578 + 2.69520014053524 NA non-coding (NR_045608, exon 1 of 17) non-coding (NR_045608, exon 1 of 17) 178 NR_045608 17765 Mm.257149 NM_013827 ENSMUSG00000029267 Mtf2 9230112N11Rik|AA537621|C76717|M96|Pcl2 metal response element binding transcription factor 2 protein-coding common_peak1_106_680_0.247459431343701_9.53524070368392_2.69494204950247 chr4 59580602 59582395 + 2.69494204950247 NA promoter-TSS (NM_001301367) promoter-TSS (NM_001301367) -65 NM_001301367 72479 Mm.272905 NM_024255 ENSMUSG00000028383 Hsdl2 2610207I16Rik hydroxysteroid dehydrogenase like 2 protein-coding common_peak2_129_882_0.217257203870787_9.89489822958386_2.69491207536385 chr12 54998015 55000188 + 2.69491207536385 NA Intergenic Intergenic -12765 NM_013815 217578 Mm.479583 NM_013815 ENSMUSG00000035021 Baz1a Acf1|B930060C03|BC065123|Gtl5|Wcrf180|cbp146 bromodomain adjacent to zinc finger domain 1A protein-coding common_peak1_44_363_-0.381616002634065_8.31698663888166_2.69447679317873 chr14 7774157 7774755 + 2.69447679317873 NA Intergenic Intergenic -43501 NM_001081427 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_44_363_-0.381616002634065_8.31698663888166_2.69447679317873-2 chr6 129583247 129583944 + 2.69447679317873 NA intron (NM_153590, intron 5 of 6) intron (NM_153590, intron 5 of 6) 5309 NM_153590 243655 Mm.30968 NM_153590 ENSMUSG00000050241 Klre1 Klre-1|NKG2I killer cell lectin-like receptor family E member 1 protein-coding unique_peak2_8_74_-0.950745639809568_5.7534458705911_2.69422232619315-2 chr19 56450443 56451126 + 2.69422232619315 NA Intergenic MER53|DNA|hAT -10853 NM_001164263 226245 Mm.156742 NM_172641 ENSMUSG00000035818 Plekhs1 9930023K05Rik pleckstrin homology domain containing, family S member 1 protein-coding unique_peak2_8_74_-0.950745639809568_5.7534458705911_2.69422232619315-3 chr8 82303966 82304614 + 2.69422232619315 NA Intergenic IAPLTR2_Mm|LTR|ERVK 98296 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak2_8_74_-0.950745639809568_5.7534458705911_2.69422232619315 chr11 78080391 78080977 + 2.69422232619315 NA promoter-TSS (NM_022313) promoter-TSS (NM_022313) -301 NM_022313 57837 Mm.21096 NM_022313 ENSMUSG00000020832 Eral1 2610524P08Rik|9130407C09Rik|AU019798|Era|M-ERA|MERA-S|MERA-W Era (G-protein)-like 1 (E. coli) protein-coding common_peak2_142_1000_0.204964087746434_10.0697083027092_2.69390846976011 chr19 4624737 4626496 + 2.69390846976011 NA promoter-TSS (NM_023131) promoter-TSS (NM_023131) 1 NM_023131 19671 Mm.391143 NM_023131 ENSMUSG00000024889 Rce1 D19Ertd283e|D19Ertd98e Ras converting CAAX endopeptidase 1 protein-coding common_peak1_43_355_-0.389323377086091_8.28107174242335_2.69389640798131 chr12 99639799 99640786 + 2.69389640798131 NA Intergenic Intergenic -12318 NR_045288 73457 Mm.383439 NR_045288 ENSMUSG00000100211 1700064M15Rik - RIKEN cDNA 1700064M15 gene ncRNA common_peak1_43_355_-0.389323377086091_8.28107174242335_2.69389640798131-2 chr5 93150885 93151751 + 2.69389640798131 NA intron (NM_001310669, intron 3 of 10) intron (NM_001310669, intron 3 of 10) 55177 NM_017367 12453 Mm.250419 NM_017367 ENSMUSG00000063015 Ccni - cyclin I protein-coding common_peak1_142_1319_-0.194131867663389_10.2692562804141_2.69335821480588 chr7 30193950 30195133 + 2.69335821480588 NA intron (NM_009795, intron 1 of 10) intron (NM_009795, intron 1 of 10) 507 NM_009795 12336 Mm.439782 NM_009795 ENSMUSG00000001794 Capns1 Capa-4|Capa4|Capn4|D7Ertd146e calpain, small subunit 1 protein-coding common_peak1_247_2049_0.145110943900566_11.0739636663431_2.69308234934119 chr2 157565457 157567142 + 2.69308234934119 NA promoter-TSS (NM_016916) promoter-TSS (NM_016916) 62 NM_016916 53619 Mm.480461 NM_016916 ENSMUSG00000067787 Blcap AI462828|Bc10 bladder cancer associated protein protein-coding common_peak2_92_564_0.268709663585041_9.27646188909507_2.69212992399737 chr9 78447693 78449009 + 2.69212992399737 NA exon (NM_026658, exon 1 of 12) exon (NM_026658, exon 1 of 12) 141 NM_026658 68291 Mm.291779 NM_026658 ENSMUSG00000032342 Mto1 2310039H01Rik|5730419A02Rik mitochondrial tRNA translation optimization 1 protein-coding common_peak2_92_809_-0.250961376884398_9.53629740932979_2.6917207976424 chr12 86800161 86802847 + 2.6917207976424 NA Intergenic Intergenic 67135 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak2_30_120_0.547818967459712_7.19277272100445_2.69129093240903 chr5 130079304 130080076 + 2.69129093240903 NA intron (NM_001130476, intron 1 of 5) CpG 320 NM_001130476 22021 Mm.332720 NM_013837 ENSMUSG00000034118 Tpst1 R75054|Tango13a protein-tyrosine sulfotransferase 1 protein-coding common_peak1_30_120_0.547818967459712_7.19277272100445_2.69129093240903 chr8 11107339 11107891 + 2.69129093240903 NA Intergenic Intergenic -99185 NM_001081212 384783 Mm.407207 NM_001081212 ENSMUSG00000038894 Irs2 Irs-2 insulin receptor substrate 2 protein-coding common_peak1_151_1415_-0.187404413127039_10.3739033435195_2.69064506526117 chr6 87838051 87839975 + 2.69064506526117 NA promoter-TSS (NM_133934) promoter-TSS (NM_133934) -254 NM_133934 57905 Mm.241546 NM_133934 ENSMUSG00000030056 Isy1 5830446M03Rik|AI181014|AU020769 ISY1 splicing factor homolog protein-coding common_peak2_80_693_-0.272449769585382_9.30256696778557_2.68899328414639 chr16 87431611 87433326 + 2.68899328414639 NA TTS (NM_016924) TTS (NM_016924) 138 NM_001081068 78913 Mm.249005 NM_001081068 ENSMUSG00000052299 Ltn1 4930528H02Rik|AV266914|C87237|Listerin|Rnf160|Zfp294 listerin E3 ubiquitin protein ligase 1 protein-coding common_peak2_80_693_-0.272449769585382_9.30256696778557_2.68899328414639-2 chr8 122435507 122438962 + 2.68899328414639 NA intron (NM_138656, intron 6 of 9) intron (NM_138656, intron 6 of 9) -4294 NM_007806 13057 Mm.271671 NM_007806 ENSMUSG00000006519 Cyba b558|nmf333|p22-phox|p22phox cytochrome b-245, alpha polypeptide protein-coding common_peak1_168_1245_0.184725495505408_10.3754511007767_2.68884655771749 chr2 73311881 73313466 + 2.68884655771749 NA promoter-TSS (NM_025854) promoter-TSS (NM_025854) 21 NM_029022 74616 Mm.247457 NM_029022 ENSMUSG00000008226 Scrn3 4833415E20Rik|AI427019|AV002033|Ses3 secernin 3 protein-coding common_peak1_251_2543_-0.138049172959862_11.2438583688044_2.68858299489883 chr16 38398735 38400859 + 2.68858299489883 NA intron (NM_134102, intron 9 of 10) intron (NM_134102, intron 9 of 10) 33348 NM_134102 85031 Mm.279805 NM_134102 ENSMUSG00000002847 Pla1a AA986889|Ps-pla1|Pspla1 phospholipase A1 member A protein-coding common_peak2_45_372_-0.377958704975372_8.35405246776755_2.68838691949682 chr19 46984485 46986025 + 2.68838691949682 NA intron (NM_001164363, intron 1 of 17) intron (NM_001164363, intron 1 of 17) -15688 NM_001164365 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak2_45_213_0.423606128878719_7.95327005084051_2.68798555475214 chr11 88598513 88600095 + 2.68798555475214 NA intron (NM_054043, intron 5 of 13) intron (NM_054043, intron 5 of 13) -19947 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA unique_peak2_13_111_-0.747402483226034_6.43365368044459_2.68747123914389 chr7 28802862 28803656 + 2.68747123914389 NA Intergenic ORR1E|LTR|ERVL-MaLR -7631 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak1_13_111_-0.747402483226034_6.43365368044459_2.68747123914389 chr4 62628464 62628755 + 2.68747123914389 NA intron (NM_019492, intron 14 of 19) intron (NM_019492, intron 14 of 19) 8937 NM_134257 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_176_1686_-0.170583337092458_10.6349525897413_2.6865215334914 chr12 85597611 85600423 + 2.6865215334914 NA promoter-TSS (NM_030887) promoter-TSS (NM_030887) -88 NM_001205052 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak1_13_34_0.930669421886604_5.59461772788827_2.68589576607121 chr17 33941118 33941404 + 2.68589576607121 NA promoter-TSS (NM_010385) promoter-TSS (NM_010385) 538 NM_020603 57315 Mm.2437 NM_020603 ENSMUSG00000024312 Wdr46 2310007I04Rik|Bing4|C78447|C78559 WD repeat domain 46 protein-coding common_peak1_13_34_0.930669421886604_5.59461772788827_2.68589576607121-2 chr2 117443919 117444237 + 2.68589576607121 NA Intergenic Intergenic -101201 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding unique_peak2_7_67_-1.01782188931153_5.57855189659458_2.6858957660712 chr10 127303489 127304072 + 2.6858957660712 NA intron (NM_001003913, intron 10 of 20) B1_Mus2|SINE|Alu 8006 NM_001003913 216443 Mm.28173 NM_001003913 ENSMUSG00000040354 Mars Metrs|Mtrns methionine-tRNA synthetase protein-coding common_peak2_57_478_-0.328606220037255_8.73957873571755_2.68461885299061 chr5 3595367 3596853 + 2.68461885299061 NA promoter-TSS (NM_027777) promoter-TSS (NM_027777) 44 NM_001293806 71382 Mm.379196 NM_027777 ENSMUSG00000005907 Pex1 5430414H02Rik|E330005K07Rik|ZWS1 peroxisomal biogenesis factor 1 protein-coding common_peak1_79_683_-0.273493664882409_9.28110568244469_2.68444971773001 chr7 126701246 126702614 + 2.68444971773001 NA intron (NM_001301374, intron 3 of 10) intron (NM_001301374, intron 3 of 10) 2290 NM_001301374 12721 Mm.290482 NM_009898 ENSMUSG00000030707 Coro1a Clabp|Lmb3|TACO|p57 coronin, actin binding protein 1A protein-coding common_peak1_162_1188_0.188311444175714_10.3096887218335_2.68419153893305 chr1 23921538 23922763 + 2.68419153893305 NA exon (NM_028534, exon 1 of 10) exon (NM_028534, exon 1 of 10) 231 NM_028534 98366 Mm.329963 NM_028534 ENSMUSG00000026155 Smap1 1700056O10Rik|4921514B13Rik|4921525H11Rik|AI462175 small ArfGAP 1 protein-coding common_peak1_91_556_0.270151909126191_9.25660947190313_2.6840058461045-2 chr16 11908243 11909746 + 2.6840058461045 NA intron (NR_033509, intron 2 of 2) intron (NR_033509, intron 2 of 2) 429 NM_146067 223978 Mm.86360 NM_146067 ENSMUSG00000065979 Cpped1 C530044N13Rik calcineurin-like phosphoesterase domain containing 1 protein-coding common_peak1_91_556_0.270151909126191_9.25660947190313_2.6840058461045 chr12 70937502 70938569 + 2.6840058461045 NA intron (NM_019785, intron 1 of 12) CpG 178 NM_019785 56444 Mm.29317 NM_019785 ENSMUSG00000021076 Actr10 Actr11|Arp11 ARP10 actin-related protein 10 protein-coding common_peak1_216_2135_-0.150477617687779_10.9854571228437_2.68387579298067 chr1 40468650 40471200 + 2.68387579298067 NA intron (NM_008365, intron 1 of 10) intron (NM_008365, intron 1 of 10) 3919 NM_008365 16182 Mm.253664 NM_008365 ENSMUSG00000026070 Il18r1 Il18ralpha|Il1rrp interleukin 18 receptor 1 protein-coding common_peak1_59_497_-0.324733188284021_8.79763533792607_2.68384739297992 chr1 164070959 164072011 + 2.68384739297992 NA intron (NM_011346, intron 6 of 8) intron (NM_011346, intron 6 of 8) 9409 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak2_71_398_0.317665048023034_8.79907746023386_2.68384739297992 chr9 42028251 42030063 + 2.68384739297992 NA intron (NM_011436, intron 21 of 47) intron (NM_011436, intron 21 of 47) 95132 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak2_59_497_-0.324733188284021_8.79763533792607_2.68384739297992 chr11 59449614 59450785 + 2.68384739297992 NA promoter-TSS (NM_144521) promoter-TSS (NM_144521) 154 NM_001205068 194952 Mm.295954 NM_178659 ENSMUSG00000036819 Jmjd4 6430559I23 jumonji domain containing 4 protein-coding common_peak1_59_497_-0.324733188284021_8.79763533792607_2.68384739297992-2 chr10 91083004 91083560 + 2.68384739297992 NA promoter-TSS (NM_001042558) promoter-TSS (NM_001042558) 243 NM_026166 67454 Mm.252843 NM_026166 ENSMUSG00000019975 Ikbip 1200009F10Rik|1700023M03Rik|D18354|Ikip IKBKB interacting protein protein-coding common_peak1_71_398_0.317665048023034_8.79907746023386_2.68384739297992 chr17 28177024 28177876 + 2.68384739297992 NA promoter-TSS (NM_172617) promoter-TSS (NM_172617) 32 NM_172617 224656 Mm.267359 NM_172617 ENSMUSG00000024220 Zfp523 2810027J07|BC025615|Znf76 zinc finger protein 523 protein-coding common_peak2_411_3926_0.105560623483054_11.9919921944079_2.68325752712188 chr13 54686224 54689412 + 2.68325752712188 NA promoter-TSS (NM_134064) promoter-TSS (NM_134064) -10 NM_001146026 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak1_46_381_-0.37429774060973_8.39027995773088_2.68325105393853 chr12 36039380 36040223 + 2.68325105393853 NA intron (NM_025359, intron 1 of 5) intron (NM_025359, intron 1 of 5) 2677 NM_025359 66109 Mm.254663 NM_025359 ENSMUSG00000020577 Tspan13 1100001I23Rik|NET-6|Tm4sf13 tetraspanin 13 protein-coding common_peak1_113_1018_-0.221827305429283_9.88202468345117_2.68323005069323 chr12 102757112 102758507 + 2.68323005069323 NA promoter-TSS (NM_025666) promoter-TSS (NM_025666) 1 NM_001142939 100859931 Mm.291222 NM_001142939 ENSMUSG00000041716 Gm20604 AK010878-Moap1 predicted gene 20604 protein-coding common_peak1_113_1018_-0.221827305429283_9.88202468345117_2.68323005069323-2 chr15 58214933 58216144 + 2.68323005069323 NA promoter-TSS (NM_026346) promoter-TSS (NM_026346) -646 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding common_peak2_117_776_0.23036792782047_9.71695475231795_2.6829683434277 chr11 55077031 55078944 + 2.6829683434277 NA intron (NM_177471, intron 1 of 6) intron (NM_177471, intron 1 of 6) 144 NM_177471 52570 Mm.22361 NM_177471 ENSMUSG00000049588 Ccdc69 2210021E03Rik|D11Ertd461e coiled-coil domain containing 69 protein-coding common_peak2_144_1340_-0.192324620513585_10.2929312116477_2.68291747622235 chr12 54709495 54711432 + 2.68291747622235 NA Intergenic U1|snRNA|snRNA -14598 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak2_156_1468_-0.183143046150631_10.429047157481_2.68289292748968 chr1 39535084 39537026 + 2.68289292748968 NA exon (NM_028043, exon 1 of 7) exon (NM_028043, exon 1 of 7) 253 NM_028043 52846 Mm.259421 NM_028043 ENSMUSG00000003135 Cnot11 2410015L18Rik|C40|D1Bwg0212e CCR4-NOT transcription complex, subunit 11 protein-coding common_peak2_349_3189_0.116822903935979_11.6977521606202_2.68285740407208 chr11 107406383 107412406 + 2.68285740407208 NA intron (NM_145823, intron 1 of 9) (GAAAA)n|Simple_repeat|Simple_repeat 61326 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_55_460_-0.335445879225057_8.68090000081681_2.6817669648978 chr14 73116250 73117271 + 2.6817669648978 NA Intergenic Lx2|LINE|L1 -25750 NM_001170694 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak1_230_1870_0.151262213685566_10.9452249500836_2.6817314113603 chr4 149656750 149659141 + 2.6817314113603 NA intron (NM_001164052, intron 6 of 21) intron (NM_001164052, intron 6 of 21) -2378 NR_105990 102465983 NR_105990 ENSMUSG00000098580 Mir7023 Gm27912|mmu-mir-7023 microRNA 7023 ncRNA unique_peak2_52_433_-0.345809467001366_8.5886464989438_2.68124542847547 chr14 70158839 70160539 + 2.68124542847547 NA promoter-TSS (NM_001004155) promoter-TSS (NM_001004155) -187 NM_001004155 268759 Mm.12148 NM_001004155 ENSMUSG00000044551 9930012K11Rik - RIKEN cDNA 9930012K11 gene protein-coding common_peak2_52_433_-0.345809467001366_8.5886464989438_2.68124542847547 chr14 69554880 69556173 + 2.68124542847547 NA promoter-TSS (NR_045091).2 promoter-TSS (NR_045091).2 125 NM_026174 67464 Mm.489765 NM_026174 ENSMUSG00000095463 Entpd4 1200014F22Rik|4930513O14Rik|A430102M06Rik|AI414893|Lysal1|mKIAA0392 ectonucleoside triphosphate diphosphohydrolase 4 protein-coding common_peak1_46_220_0.415228528034586_7.99551682340872_2.68123930084433 chr1 135313225 135313855 + 2.68123930084433 NA intron (NM_011590, intron 1 of 5) intron (NM_011590, intron 1 of 5) 197 NM_011590 21854 Mm.2368 NM_011590 ENSMUSG00000062580 Timm17a 17kDa|mTim17a translocase of inner mitochondrial membrane 17a protein-coding common_peak1_36_295_-0.429669714417539_7.99461850842018_2.68123930084433 chr2 117249598 117250255 + 2.68123930084433 NA intron (NM_026620, intron 1 of 7) CpG 187 NM_026620 68215 Mm.219389 NM_026620 ENSMUSG00000027349 Fam98b 2610510H03Rik family with sequence similarity 98, member B protein-coding common_peak1_46_220_0.415228528034586_7.99551682340872_2.68123930084433-2 chr2 144489497 144490165 + 2.68123930084433 NA intron (NM_172859, intron 12 of 20) intron (NM_172859, intron 12 of 20) 24655 NR_038065 171588 Mm.450554 NR_038065 ENSMUSG00000083674 Gm38402 - zinc finger protein pseudogene pseudo unique_peak2_36_295_-0.429669714417539_7.99461850842018_2.68123930084433 chr7 25119777 25121575 + 2.68123930084433 NA intron (NM_001163555, intron 4 of 13) intron (NM_001163555, intron 4 of 13) 11784 NM_011138 18987 Mm.76683 NM_011138 ENSMUSG00000008496 Pou2f2 Oct-2|Oct2a|Oct2b|Oct2c|Oct2d|Otf-2|Otf2 POU domain, class 2, transcription factor 2 protein-coding common_peak2_56_288_0.369573037049495_8.35971220102543_2.68112314884653 chr5 148341763 148343261 + 2.68112314884653 NA intron (NM_001301424, intron 6 of 12) intron (NM_001301424, intron 6 of 12) 50303 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_54_451_-0.338887944029272_8.65073499040055_2.68106052530828 chr14 60704776 60705970 + 2.68106052530828 NA intron (NM_001033272, intron 2 of 12) intron (NM_001033272, intron 2 of 12) -27531 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak1_153_1103_0.194809395181254_10.2059291543688_2.68084490390576 chr3 90051416 90052564 + 2.68084490390576 NA promoter-TSS (NM_025762) promoter-TSS (NM_025762) 354 NM_001287087 99650 Mm.300083 NM_025762 ENSMUSG00000027942 4933434E20Rik 5730552F22Rik|AI462154|NICE-3|NS5ATP4 RIKEN cDNA 4933434E20 gene protein-coding unique_peak2_21_172_-0.574830484942773_7.14721298516534_2.680651890653 chr10 80475066 80476035 + 2.680651890653 NA Intergenic CpG -19356 NM_139226 246086 Mm.250572 NM_139226 ENSMUSG00000045518 Onecut3 OC-3|Oc3 one cut domain, family member 3 protein-coding common_peak1_21_172_-0.574830484942773_7.14721298516534_2.680651890653 chr14 29957340 29957792 + 2.680651890653 NA Intergenic Intergenic -10814 NM_019979 80795 Mm.104491 NM_019979 ENSMUSG00000042682 Selenok 1110001C03Rik|AA673253|HSPC030|Hsp30|Selk selenoprotein K protein-coding common_peak1_49_407_-0.359797838648754_8.49252642264712_2.67947079779401 chr7 66159342 66160277 + 2.67947079779401 NA intron (NM_001081163, intron 2 of 2) L1_Mur3|LINE|L1 50294 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_250_2531_-0.138264208614343_11.2369295851212_2.67922343373182 chr13 95890582 95893854 + 2.67922343373182 NA promoter-TSS (NM_027711) promoter-TSS (NM_027711) -296 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding common_peak2_70_598_-0.293252646941768_9.0797858693179_2.67846099712928 chr19 5256571 5259141 + 2.67846099712928 NA intron (NM_153129, intron 1 of 23) intron (NM_153129, intron 1 of 23) 15263 NM_153129 107975 Mm.234923 NM_153129 ENSMUSG00000024855 Pacs1 AI325977 phosphofurin acidic cluster sorting protein 1 protein-coding common_peak1_315_3316_-0.120339583301993_11.635493505137_2.67832778518787 chr11 95356026 95358647 + 2.67832778518787 NA intron (NM_172543, intron 1 of 7) PB1D10|SINE|Alu 20318 NM_172543 215512 Mm.262113 NM_172543 ENSMUSG00000038893 Fam117a 5730593F17Rik|AW548096 family with sequence similarity 117, member A protein-coding unique_peak2_27_220_-0.501337809373506_7.53723365470468_2.67810579670182 chr8 114879643 114881149 + 2.67810579670182 NA intron (NM_019573, intron 8 of 8) (GA)n|Simple_repeat|Simple_repeat 440744 NM_019573 80707 Mm.440420 NM_019573 ENSMUSG00000004637 Wwox 5330426P09Rik|9030416C10Rik|WOX1 WW domain-containing oxidoreductase protein-coding common_peak1_27_220_-0.501337809373506_7.53723365470468_2.67810579670182 chr10 118435181 118435716 + 2.67810579670182 NA Intergenic Intergenic -5598 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak1_50_416_-0.356232796317206_8.52578717528606_2.67735222417291 chr18 38339070 38339649 + 2.67735222417291 NA promoter-TSS (NM_011937) promoter-TSS (NM_011937) -366 NM_011937 26384 Mm.22374 NM_011937 ENSMUSG00000052102 Gnpda1 GNPDA|Gnp1|Gnpi|oscillin glucosamine-6-phosphate deaminase 1 protein-coding common_peak2_31_253_-0.465819112460641_7.75577513054184_2.67672143598605 chr7 28277639 28278529 + 2.67672143598605 NA exon (NM_001177427, exon 1 of 1) exon (NM_001177427, exon 1 of 1) 378 NM_001177427 434156 Mm.118535 NM_001177427 ENSMUSG00000070705 Eid2b 3010005C08Rik EP300 interacting inhibitor of differentiation 2B protein-coding common_peak1_31_253_-0.465819112460641_7.75577513054184_2.67672143598605-2 chrX 48433903 48434346 + 2.67672143598605 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 29008 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak1_31_253_-0.465819112460641_7.75577513054184_2.67672143598605 chr13 43170874 43171566 + 2.67672143598605 NA intron (NM_025935, intron 1 of 7) intron (NM_025935, intron 1 of 7) 281 NM_001252639 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_423_4073_0.103348434036292_12.043904481984_2.67643953727688 chr11 45851693 45853931 + 2.67643953727688 NA intron (NM_001045520, intron 1 of 11) intron (NM_001045520, intron 1 of 11) 848 NM_001045520 216705 Mm.169673 NM_001045520 ENSMUSG00000006169 Clint1 AI642036|AW537616|C530049I24Rik|Enth|Epn4|F630206G17Rik|mKIAA0171 clathrin interactor 1 protein-coding common_peak2_140_1297_-0.194809064419836_10.2446701357892_2.67606735521644 chr19 11410630 11414501 + 2.67606735521644 NA intron (NM_029499, intron 1 of 6) Lx10|LINE|L1 4904 NM_029499 64380 Mm.440715 NM_029499 ENSMUSG00000024675 Ms4a4c 5830413L19Rik|AI449185|Ms4a9 membrane-spanning 4-domains, subfamily A, member 4C protein-coding common_peak2_90_548_0.271682703714848_9.23650369086262_2.67601278030798 chr13 32337879 32339633 + 2.67601278030798 NA promoter-TSS (NM_146041) promoter-TSS (NM_146041) -212 NM_146041 218138 Mm.247143 NM_146041 ENSMUSG00000038372 Gmds BC031788|C87208 GDP-mannose 4, 6-dehydratase protein-coding common_peak1_21_71_0.689872741251639_6.51486137206813_2.67572827188001-2 chr3 90358445 90358937 + 2.67572827188001 NA TTS (NM_139304) TTS (NM_139304) 17037 NM_139304 229542 Mm.270999 NM_139304 ENSMUSG00000042390 Gatad2b AL118180|C430014D17Rik|P66beta|mKIAA1150 GATA zinc finger domain containing 2B protein-coding common_peak2_21_71_0.689872741251639_6.51486137206813_2.67572827188001 chr9 95749879 95750405 + 2.67572827188001 NA 5' UTR (NM_011643, exon 1 of 13) 5' UTR (NM_011643, exon 1 of 13) 216 NM_001311123 22063 Mm.149633 NM_011643 ENSMUSG00000032839 Trpc1 Mtrp1|Trp1|Trrp1 transient receptor potential cation channel, subfamily C, member 1 protein-coding common_peak1_21_71_0.689872741251639_6.51486137206813_2.67572827188001 chr17 47612223 47612708 + 2.67572827188001 NA promoter-TSS (NM_016859) promoter-TSS (NM_016859) 869 NM_020048 56771 Mm.59393 NM_020048 ENSMUSG00000092558 Med20 1110011O05Rik|2410115I17Rik|AU018348|Trfp mediator complex subunit 20 protein-coding common_peak1_84_731_-0.264057990431551_9.38367084306827_2.67506499483226 chr14 21847697 21849003 + 2.67506499483226 NA intron (NM_026965, intron 2 of 6) intron (NM_026965, intron 2 of 6) 560 NM_026965 69156 Mm.11827 NM_026965 ENSMUSG00000021773 Comtd1 1810030M08Rik|MT773 catechol-O-methyltransferase domain containing 1 protein-coding common_peak1_137_955_0.208340823452403_10.0050372197069_2.67488417883442 chr11 75965973 75967434 + 2.67488417883442 NA Intergenic CpG -33209 NM_198637 74230 Mm.271247 NM_198637 ENSMUSG00000053783 1700016K19Rik Liat1 RIKEN cDNA 1700016K19 gene protein-coding common_peak2_108_698_0.2425935901542_9.57044544045254_2.67340315788006 chr6 54039101 54040688 + 2.67340315788006 NA promoter-TSS (NM_001163640) promoter-TSS (NM_001163640) -38 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak1_99_877_-0.238837315026263_9.65865847202223_2.67329332568578 chr12 4082037 4083332 + 2.67329332568578 NA 5' UTR (NM_153082, exon 1 of 7) 5' UTR (NM_153082, exon 1 of 7) 110 NM_153082 217378 Mm.271656 NM_153082 ENSMUSG00000020657 Dnajc27 AI639580|C330021A05Rik|Rabj|Rbj DnaJ heat shock protein family (Hsp40) member C27 protein-coding common_peak2_123_1120_-0.210663735698407_10.0252386949562_2.67321517165162 chr17 53689155 53690543 + 2.67321517165162 NA promoter-TSS (NM_028232) promoter-TSS (NM_028232) -534 NM_028232 72415 Mm.153202 NM_028232 ENSMUSG00000023940 Sgol1 3300001M08Rik|C81037|Sgo1 shugoshin-like 1 (S. pombe) protein-coding unique_peak2_19_156_-0.603486521260851_6.9928774882612_2.67283146351975 chr3 89349536 89350518 + 2.67283146351975 NA promoter-TSS (NM_009614) promoter-TSS (NM_009614) -17 NM_009614 11490 Mm.274049 NM_009614 ENSMUSG00000028041 Adam15 AD56|MDC15 a disintegrin and metallopeptidase domain 15 (metargidin) protein-coding common_peak1_27_103_0.586125031876834_6.99350223407951_2.67283146351975-2 chr15 102233426 102233988 + 2.67283146351975 NA Intergenic (CTATG)n|Simple_repeat|Simple_repeat -1772 NM_013566 16421 Mm.58 NM_013566 ENSMUSG00000001281 Itgb7 Ly69 integrin beta 7 protein-coding common_peak1_27_103_0.586125031876834_6.99350223407951_2.67283146351975 chr12 25233142 25233701 + 2.67283146351975 NA Intergenic Intergenic 104247 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_19_156_-0.603486521260851_6.9928774882612_2.67283146351975 chr1 14308286 14308707 + 2.67283146351975 NA intron (NM_001310459, intron 1 of 17) intron (NM_001310459, intron 1 of 17) 1703 NM_001310459 14048 Mm.250185 NM_010164 ENSMUSG00000025932 Eya1 bor EYA transcriptional coactivator and phosphatase 1 protein-coding common_peak2_31_126_0.534180887539359_7.25577513054184_2.67137168144124 chr14 67712596 67713724 + 2.67137168144124 NA exon (NM_001110162, exon 4 of 15) exon (NM_001110162, exon 4 of 15) 2450 NM_001110162 108912 Mm.33831 NM_175384 ENSMUSG00000048922 Cdca2 2610311M19Rik|AI586158 cell division cycle associated 2 protein-coding common_peak2_31_126_0.534180887539359_7.25577513054184_2.67137168144124-2 chr7 105936741 105937905 + 2.67137168144124 NA intron (NM_029000, intron 1 of 3) L1VL4|LINE|L1 -8632 NR_040453 100417829 Mm.490377 NR_040453 ENSMUSG00000099241 Gm17757 - GTPase, very large interferon inducible 1 pseudogene pseudo common_peak1_31_126_0.534180887539359_7.25577513054184_2.67137168144124 chr8 23255641 23256387 + 2.67137168144124 NA intron (NM_020585, intron 1 of 4) intron (NM_020585, intron 1 of 4) 1066 NM_020585 57437 Mm.196269 NM_020585 ENSMUSG00000015341 Golga7 AB041568|C130038N16Rik|GCP16|GOLGA3AP1|HSPC041|R75586 golgi autoantigen, golgin subfamily a, 7 protein-coding common_peak2_38_311_-0.412458769254388_8.07917283423505_2.6712755130836 chr1 127868417 127869581 + 2.6712755130836 NA intron (NM_178690, intron 2 of 23) CpG-490 226 NM_178690 226407 Mm.489713 NM_178690 ENSMUSG00000036104 Rab3gap1 1700003B17Rik|4732493F09Rik|AL117896|Rab3gap|p130 RAB3 GTPase activating protein subunit 1 protein-coding common_peak1_37_162_0.478248360352169_7.58785233440716_2.67060533199756 chr2 104816106 104816735 + 2.67060533199756 NA intron (NM_001123327, intron 1 of 11) CpG 276 NM_001123327 99003 Mm.274314 NM_001123327 ENSMUSG00000074994 Qser1 4732486I23Rik|AI502974 glutamine and serine rich 1 protein-coding common_peak2_308_3229_-0.121636049651265_11.5965004247557_2.67009448765882 chr2 167931153 167934079 + 2.67009448765882 NA intron (NM_011201, intron 1 of 8) CpG 289 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_133_918_0.213234960047044_9.95053853131256_2.66948275107952 chr11 51755558 51757211 + 2.66948275107952 NA 5' UTR (NM_175255, exon 1 of 23) 5' UTR (NM_175255, exon 1 of 23) 450 NM_001290785 77371 Mm.33878 NM_175255 ENSMUSG00000036391 Sec24a - Sec24 related gene family, member A (S. cerevisiae) protein-coding common_peak2_355_3815_-0.111602464868609_11.8420442235712_2.66871864841408 chr8 120714593 120718260 + 2.66871864841408 NA Intergenic Intergenic -19932 NM_008320 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_24_196_-0.536036627319993_7.35403350579638_2.66862629058462 chr11 69408094 69408702 + 2.66862629058462 NA 5' UTR (NM_001017426, exon 3 of 23) 5' UTR (NM_001017426, exon 3 of 23) 5277 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding unique_peak2_24_196_-0.536036627319993_7.35403350579638_2.66862629058462 chr8 116589716 116590987 + 2.66862629058462 NA intron (NM_029441, intron 3 of 6) intron (NM_029441, intron 3 of 6) 85336 NM_029297 75465 Mm.23114 NM_029297 ENSMUSG00000034467 Dynlrb2 1700009A04Rik|DNLC2B|Dncl2b dynein light chain roadblock-type 2 protein-coding common_peak2_163_1543_-0.177789149829941_10.5035624623531_2.66842887145927 chr19 41330235 41334712 + 2.66842887145927 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 52597 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak2_76_654_-0.278629555651746_9.21603631859894_2.66815633567106 chr9 21509275 21511075 + 2.66815633567106 NA promoter-TSS (NM_010744) promoter-TSS (NM_010744) 11 NM_010744 17083 Mm.196618 NM_010744 ENSMUSG00000032180 Tmed1 Il1rl1l|Ly84l|St2l transmembrane p24 trafficking protein 1 protein-coding common_peak1_314_2788_0.124182527801789_11.5076234829292_2.6678828807005 chr13 32992234 32995239 + 2.6678828807005 NA Intergenic RMER17B|LTR|ERVK -10805 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding common_peak2_139_1286_-0.195126001324455_10.2322333375585_2.66746637079433 chr11 69072728 69074761 + 2.66746637079433 NA TTS (NM_028336) TTS (NM_028336) 2935 NM_028336 66910 Mm.33964 NM_025838 ENSMUSG00000020895 Tmem107 1110004B13Rik|2810049P21Rik transmembrane protein 107 protein-coding common_peak1_139_1286_-0.195126001324455_10.2322333375585_2.66746637079433 chr4 44012056 44013428 + 2.66746637079433 NA promoter-TSS (NM_001290470) promoter-TSS (NM_001290470) 92 NM_001290470 12757 Mm.298875 NM_016760 ENSMUSG00000028478 Clta AV026556|Lca clathrin, light polypeptide (Lca) protein-coding common_peak1_182_1382_0.175068526049762_10.5211197041754_2.66661303480341 chr4 134749730 134751479 + 2.66661303480341 NA intron (NM_145554, intron 4 of 8) intron (NM_145554, intron 4 of 8) 17400 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak1_251_2093_0.142788055393684_11.1034397546277_2.66627253165081 chr2 163601716 163603405 + 2.66627253165081 NA intron (NR_131225, intron 1 of 3) CpG 246 NR_131225 76080 Mm.89828 NM_029512 ENSMUSG00000017679 Ttpal 3110080A02Rik|5830472M02Rik tocopherol (alpha) transfer protein-like protein-coding common_peak1_253_2114_0.142381057353088_11.1176324766839_2.66483750307698 chr8 57651741 57654280 + 2.66483750307698 NA promoter-TSS (NM_001167981) promoter-TSS (NM_001167981) 45 NM_001167981 108150 Mm.62886 NM_144731 ENSMUSG00000031608 Galnt7 AI225872 UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 protein-coding unique_peak2_38_168_0.472064013325676_7.63691144294502_2.66468487654592 chr9 25191427 25192776 + 2.66468487654592 NA Intergenic Intergenic -40320 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding common_peak1_32_261_-0.45610305387657_7.80537147459916_2.66456106064597 chr15 58927991 58928613 + 2.66456106064597 NA intron (NM_175151, intron 2 of 11) B3A|SINE|B2 5428 NM_175151 69694 Mm.383230 NM_175151 ENSMUSG00000050891 Tatdn1 2310079P03Rik|CDA11 TatD DNase domain containing 1 protein-coding common_peak1_82_711_-0.266227561798051_9.34261965006737_2.66427717116619 chr4 135986618 135987773 + 2.66427717116619 NA promoter-TSS (NM_025411) promoter-TSS (NM_025411) 49 NM_025411 66193 Mm.29131 NM_025411 ENSMUSG00000028669 Pithd1 1110049F12Rik|AA408179|Trp26 PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1 protein-coding common_peak2_221_2192_-0.148159618122541_11.0246102876123_2.66402198625492 chr2 90744411 90746892 + 2.66402198625492 NA exon (NM_018828, exon 1 of 17) exon (NM_018828, exon 1 of 17) 281 NM_018828 55935 Mm.489638 NM_018828 ENSMUSG00000008200 Fnbp4 FBP30|Fnbp30|mKIAA1014 formin binding protein 4 protein-coding common_peak1_66_560_-0.30131326045907_8.98120033037926_2.66392331409289 chr4 40142499 40143770 + 2.66392331409289 NA promoter-TSS (NM_007386) promoter-TSS (NM_007386) -131 NM_007386 11428 Mm.331547 NM_007386 ENSMUSG00000028405 Aco1 Aco-1|Irebp|Irp1 aconitase 1 protein-coding common_peak2_66_560_-0.30131326045907_8.98120033037926_2.66392331409289 chr8 104250557 104251942 + 2.66392331409289 NA intron (NM_029295, intron 1 of 3) CpG 388 NM_001286383 75458 Mm.269219 NM_029295 ENSMUSG00000054400 Cklf 1700001C14Rik|1810018M11Rik|A730028G07Rik|C32|CKLF1|CKLF3|CKLF4|CKLF5|Cklf2|Cklf6|HSPC224|UCK-1 chemokine-like factor protein-coding common_peak1_19_61_0.736937917243901_6.32266526900883_2.66291228502395-3 chr19 40512492 40513020 + 2.66291228502395 NA intron (NM_009166, intron 1 of 23) intron (NM_009166, intron 1 of 23) 980 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_19_61_0.736937917243901_6.32266526900883_2.66291228502395 chr1 133699051 133699488 + 2.66291228502395 NA Intergenic B1_Mur3|SINE|Alu -9161 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding common_peak1_19_61_0.736937917243901_6.32266526900883_2.66291228502395-2 chr19 6297096 6297564 + 2.66291228502395 NA intron (NM_010119, intron 3 of 4) B1_Mus1|SINE|Alu -9127 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak1_19_61_0.736937917243901_6.32266526900883_2.66291228502395-4 chr7 46958058 46958480 + 2.66291228502395 NA intron (NM_001040695, intron 1 of 11) PB1D7|SINE|Alu 249 NM_001040695 54122 Mm.1999 NM_016855 ENSMUSG00000043262 Uevld 8430408E05Rik|Attp UEV and lactate/malate dehyrogenase domains protein-coding unique_peak2_12_103_-0.771630784686515_6.31462432579783_2.66291228502394-3 chrX 75758778 75759363 + 2.66291228502394 NA intron (NR_029443, intron 2 of 8) intron (NR_029443, intron 2 of 8) 5629 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA unique_peak2_12_103_-0.771630784686515_6.31462432579783_2.66291228502394-2 chr2 167340200 167341092 + 2.66291228502394 NA intron (NM_019835, intron 1 of 8) intron (NM_019835, intron 1 of 8) 8532 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding unique_peak2_12_103_-0.771630784686515_6.31462432579783_2.66291228502394 chr18 4303420 4304106 + 2.66291228502394 NA Intergenic Intergenic 49190 NM_007746 26410 Mm.3275 NM_007746 ENSMUSG00000024235 Map3k8 Cot|Cot/Tpl2|Est|Estf|Tpl-2|Tpl2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding common_peak2_157_1141_0.191364466936829_10.2530291688313_2.66244769671923 chr7 25248832 25251589 + 2.66244769671923 NA intron (NM_010155, intron 1 of 3) CpG 548 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding common_peak1_157_1141_0.191364466936829_10.2530291688313_2.66244769671923 chr6 129817794 129820745 + 2.66244769671923 NA Intergenic B3|SINE|B2 -43420 NM_001014997 232415 Mm.290598 NM_001014997 ENSMUSG00000071158 Gm156 Klrh1 predicted gene 156 protein-coding common_peak1_15_126_-0.692431423646998_6.64246897494867_2.66186648710827-2 chr6 51059778 51060047 + 2.66186648710827 NA Intergenic Intergenic 209998 NR_029719 387166 NR_029719 ENSMUSG00000065505 Mir148a Mirn148|Mirn148a|mir-148a microRNA 148a ncRNA unique_peak2_15_126_-0.692431423646998_6.64246897494867_2.66186648710827 chr11 59211571 59212411 + 2.66186648710827 NA 3' UTR (NM_001130408, exon 5 of 5) 3' UTR (NM_001130408, exon 5 of 5) 3630 NM_024210 67862 Mm.358708 NM_024210 ENSMUSG00000020441 2310033P09Rik Mmtag2 RIKEN cDNA 2310033P09 gene protein-coding common_peak1_15_126_-0.692431423646998_6.64246897494867_2.66186648710827 chr2 34790728 34791020 + 2.66186648710827 NA intron (NM_145522, intron 3 of 7) intron (NM_145522, intron 3 of 7) 9038 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding unique_peak2_15_126_-0.692431423646998_6.64246897494867_2.66186648710827-3 chr4 119232067 119232764 + 2.66186648710827 NA promoter-TSS (NM_019783) promoter-TSS (NM_019783) 309 NM_001012400 230696 Mm.473722 NM_001012400 ENSMUSG00000078584 AU022252 AI450326 expressed sequence AU022252 protein-coding unique_peak2_15_126_-0.692431423646998_6.64246897494867_2.66186648710827-2 chr18 80577064 80578048 + 2.66186648710827 NA Intergenic Intergenic -33010 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_106_946_-0.228250196112612_9.77309551741208_2.66113777359017 chr4 114907611 114909899 + 2.66113777359017 NA promoter-TSS (NR_030721) promoter-TSS (NR_030721) 143 NM_008593 17301 Mm.7997 NM_008593 ENSMUSG00000055210 Foxd2 AI426778|Mf2 forkhead box D2 protein-coding common_peak1_17_141_-0.645061757632015_6.82721624068867_2.659438080647-2 chr16 93778573 93778911 + 2.659438080647 NA intron (NM_027293, intron 23 of 36) intron (NM_027293, intron 23 of 36) -53379 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak1_17_141_-0.645061757632015_6.82721624068867_2.659438080647 chr15 78490660 78491134 + 2.659438080647 NA exon (NM_008368, exon 3 of 10) exon (NM_008368, exon 3 of 10) 4169 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding common_peak1_39_320_-0.40868294830517_8.12208801296972_2.65938983864332 chr13 98809731 98810502 + 2.65938983864332 NA intron (NM_172591, intron 1 of 25) intron (NM_172591, intron 1 of 25) 5333 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak2_162_1532_-0.178297537737407_10.4929932127901_2.65893585843076 chr5 64863741 64866509 + 2.65893585843076 NA Intergenic Intergenic 61602 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_82_484_0.287664932093858_9.06567340312142_2.6589067944931 chr18 33213292 33214746 + 2.6589067944931 NA promoter-TSS (NM_133774) promoter-TSS (NM_133774) -203 NM_133774 170459 Mm.127058 NM_133774 ENSMUSG00000024378 Stard4 4632419C16Rik|9030213J02Rik StAR-related lipid transfer (START) domain containing 4 protein-coding common_peak1_65_551_-0.304592197930932_8.9562283578127_2.65867927083004 chr4 126262277 126262983 + 2.65867927083004 NA intron (NM_013718, intron 1 of 4) intron (NM_013718, intron 1 of 4) 225 NM_013718 27096 Mm.8392 NM_013718 ENSMUSG00000028847 Trappc3 1110058K12Rik|AI835942|AU019197|Bet3 trafficking protein particle complex 3 protein-coding common_peak1_110_987_-0.224449064219982_9.83614269947469_2.65857058794352 chr4 62681539 62682792 + 2.65857058794352 NA intron (NM_001310706, intron 1 of 6) intron (NM_001310706, intron 1 of 6) 8191 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_176_1324_0.177884276857185_10.4607187827665_2.65823866317513 chr13 51846670 51849002 + 2.65823866317513 NA intron (NM_011817, intron 3 of 3) intron (NM_011817, intron 3 of 3) 1161 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_24_87_0.626583573499087_6.77272340538684_2.65820108516133 chr9 92542038 92542695 + 2.65820108516133 NA non-coding (NR_029474, exon 1 of 1) non-coding (NR_029474, exon 1 of 1) 143 NM_001142916 26432 Mm.79983 NM_011961 ENSMUSG00000032374 Plod2 D530025C14Rik|LH2|Plod-2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 protein-coding common_peak1_24_87_0.626583573499087_6.77272340538684_2.65820108516133-2 chr9 77529385 77529921 + 2.65820108516133 NA intron (NM_001146048, intron 1 of 13) intron (NM_001146048, intron 1 of 13) 14406 NM_172528 214345 Mm.28534 NM_172528 ENSMUSG00000032352 Lrrc1 A430093J20Rik|AU016091|D030059I21|mKIAA4018 leucine rich repeat containing 1 protein-coding common_peak1_24_87_0.626583573499087_6.77272340538684_2.65820108516133 chr8 71668373 71668843 + 2.65820108516133 NA intron (NM_001029873, intron 1 of 41) intron (NM_001029873, intron 1 of 41) 3149 NM_001029873 382018 Mm.334606 NM_001029873 ENSMUSG00000034799 Unc13a 2410078G03Rik|Munc13-1 unc-13 homolog A (C. elegans) protein-coding common_peak2_93_573_0.264836471936688_9.29732516264403_2.65795376391003 chr11 117827306 117829732 + 2.65795376391003 NA intron (NM_027827, intron 2 of 10) URR1B|DNA|hAT-Charlie -2505 NM_009387 21877 Mm.2661 NM_009387 ENSMUSG00000025574 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 protein-coding common_peak1_118_785_0.228686867981038_9.73272893624912_2.65778278019084 chr9 57650379 57651788 + 2.65778278019084 NA intron (NM_001304761, intron 2 of 14) intron (NM_001304761, intron 2 of 14) 2548 NM_001304761 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak2_97_857_-0.241345289402505_9.62416119279829_2.65777592108516 chr2 71055062 71056557 + 2.65777592108516 NA promoter-TSS (NM_001165982) promoter-TSS (NM_001165982) 65 NM_001165980 75763 Mm.281668 NM_198005 ENSMUSG00000041966 Dcaf17 2810055O12Rik|4833418A01Rik|A030004A10Rik|A930009G19Rik|AI448937 DDB1 and CUL4 associated factor 17 protein-coding common_peak1_66_361_0.330697813066518_8.66519479361646_2.65762228125062 chr5 76529221 76530005 + 2.65762228125062 NA intron (NM_001289770, intron 1 of 18) CpG 302 NM_001289770 69940 Mm.403233 NM_027270 ENSMUSG00000036435 Exoc1 2810407P21Rik|A730011E05Rik|SEC3|Sec3l1|Sec3p exocyst complex component 1 protein-coding common_peak1_40_328_-0.400500508669816_8.16169351940033_2.65715146719314 chr10 96274239 96275153 + 2.65715146719314 NA Intergenic Intergenic 48489 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_40_328_-0.400500508669816_8.16169351940033_2.65715146719314 chr1 134556270 134557744 + 2.65715146719314 NA Intergenic CpG -3171 NM_152895 75605 Mm.28995 NM_152895 ENSMUSG00000042207 Kdm5b 2010009J12Rik|2210016I17Rik|AW556288|D1Ertd202e|Jarid1b|PLU-1|PUT1|Plu1|RBBP2H1A|Rb-Bp2|mKIAA4034 lysine (K)-specific demethylase 5B protein-coding common_peak2_128_1171_-0.204895168015016_10.0923092704147_2.6566627174948 chr10 127379811 127381752 + 2.6566627174948 NA Intergenic C-rich|Low_complexity|Low_complexity -9530 NM_001168292 71750 Mm.29342 NM_027900 ENSMUSG00000025404 R3hdm2 1300003K24Rik|AU041262|mKIAA1002 R3H domain containing 2 protein-coding common_peak2_125_847_0.22030101657494_9.83807096285067_2.65599598257745 chr15 66788656 66791779 + 2.65599598257745 NA intron (NM_001029841, intron 4 of 7) intron (NM_001029841, intron 4 of 7) 41612 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_121_1099_-0.212156046178693_9.99720978532267_2.65590734493468 chr9 88437701 88439783 + 2.65590734493468 NA exon (NM_172926, exon 1 of 28) exon (NM_172926, exon 1 of 28) 209 NM_172926 244962 Mm.439873 NM_172926 ENSMUSG00000032422 Snx14 B830022K16|C330035N22Rik|YR-14 sorting nexin 14 protein-coding common_peak2_101_896_-0.234681086605448_9.69162363161654_2.65528316135012 chr9 123020329 123022016 + 2.65528316135012 NA promoter-TSS (NM_025339) promoter-TSS (NM_025339) -154 NM_025339 66079 Mm.482265 NM_025339 ENSMUSG00000066233 Tmem42 0610027O18Rik|4933429E06Rik|AV003444|D9Ertd662e transmembrane protein 42 protein-coding common_peak2_173_1295_0.179560138967584_10.4296300723684_2.6547226828027 chr10 78573959 78575751 + 2.6547226828027 NA intron (NM_173751, intron 1 of 15) CpG 355 NM_173751 216136 Mm.2644 NM_173751 ENSMUSG00000032763 Ilvbl 5830463I21|AI415009 ilvB (bacterial acetolactate synthase)-like protein-coding common_peak1_32_132_0.52203751215969_7.31630119158103_2.6544359456718 chr9 120034952 120035669 + 2.6544359456718 NA Intergenic Intergenic -11712 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding unique_peak2_32_132_0.52203751215969_7.31630119158103_2.6544359456718 chr1 86294585 86295594 + 2.6544359456718 NA Intergenic Intergenic -8132 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak2_32_132_0.52203751215969_7.31630119158103_2.6544359456718 chr9 44022271 44023270 + 2.6544359456718 NA Intergenic RMER17A2|LTR|ERVK -20614 NM_009382 21838 Mm.3951 NM_009382 ENSMUSG00000032011 Thy1 CD90|T25|Thy-1|Thy-1.2|Thy1.1|Thy1.2 thymus cell antigen 1, theta protein-coding common_peak1_33_269_-0.446667024890305_7.85348208460568_2.65412573879952 chr10 128821798 128822465 + 2.65412573879952 NA promoter-TSS (NM_024180) promoter-TSS (NM_024180) 360 NM_025364 66118 Mm.235562 NM_025364 ENSMUSG00000078427 Sarnp 1110005A23Rik|Cip29 SAP domain containing ribonucleoprotein protein-coding common_peak1_296_3081_-0.124062166547338_11.5276200632411_2.65398779187978 chr6 120362768 120365032 + 2.65398779187978 NA promoter-TSS (NM_145997) promoter-TSS (NM_145997) -199 NM_145997 214899 Mm.404761 NM_145997 ENSMUSG00000030180 Kdm5a AA409370|C76986|Jarid1a|RBP2|Rbbp2 lysine (K)-specific demethylase 5A protein-coding common_peak2_63_532_-0.308513837261296_8.90373480412853_2.65389080422578 chr9 63601937 63603433 + 2.65389080422578 NA promoter-TSS (NM_030068) promoter-TSS (NM_030068) 30 NM_025857 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak1_64_542_-0.307893867471465_8.93086145406863_2.65369719239685 chr15 97963529 97964664 + 2.65369719239685 NA promoter-TSS (NM_201359) promoter-TSS (NM_201359) -133 NM_201359 380967 Mm.196630 NM_201359 ENSMUSG00000052369 Tmem106c AI046681|BC046621|D15Ertd405e transmembrane protein 106C protein-coding common_peak1_175_1673_-0.169449136297324_10.6243592444017_2.65348581095397 chr12 83687707 83689717 + 2.65348581095397 NA 5' UTR (NM_008943, exon 1 of 12) 5' UTR (NM_008943, exon 1 of 12) 149 NM_008943 19164 Mm.998 NM_008943 ENSMUSG00000019969 Psen1 Ad3h|PS-1|PS1|S182 presenilin 1 protein-coding common_peak1_86_749_-0.25794895471739_9.42177230802455_2.65296854135999 chr10 7725974 7726976 + 2.65296854135999 NA intron (NM_011835, intron 1 of 10) RSINE1|SINE|B4 475 NM_011835 23924 Mm.28127 NM_011835 ENSMUSG00000019794 Katna1 - katanin p60 (ATPase-containing) subunit A1 protein-coding common_peak2_81_476_0.290210120246272_9.04295051612865_2.6526505694532 chr13 59508222 59510568 + 2.6526505694532 NA intron (NM_001284219, intron 10 of 24) intron (NM_001284219, intron 10 of 24) 35056 NM_001284221 67269 Mm.153008 NM_023328 ENSMUSG00000021557 Agtpbp1 1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd ATP/GTP binding protein 1 protein-coding common_peak2_81_476_0.290210120246272_9.04295051612865_2.6526505694532-2 chr13 112061379 112063845 + 2.6526505694532 NA Intergenic LTR37B|LTR|ERV1 194676 NR_130345 102636620 Mm.402328 NR_130345 ENSMUSG00000086111 Gm15326 OTTMUSG00000020187 predicted gene 15326 ncRNA common_peak1_109_976_-0.224311422396113_9.82005904077033_2.6522057869876 chr11 119390045 119391280 + 2.6522057869876 NA TTS (NR_035453) TTS (NR_035453) 190 NR_035453 100316690 NR_035453 ENSMUSG00000088015 Mir1932 mir-1932|mmu-mir-1932 microRNA 1932 ncRNA common_peak2_227_1840_0.151449430572981_10.9219986266364_2.65105634296496 chr12 25315693 25321385 + 2.65105634296496 NA Intergenic Intergenic 189365 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_65_354_0.332257044455192_8.63780373661964_2.651028736143 chr14 59259436 59260819 + 2.651028736143 NA promoter-TSS (NM_001164329) promoter-TSS (NM_001164329) 89 NM_001164329 628693 Mm.479519 NM_001164329 ENSMUSG00000090881 Gm6904 EG628693 predicted gene 6904 protein-coding common_peak2_533_5459_0.0890799602966137_12.4592252159555_2.6488583626648 chr1 58709835 58714707 + 2.6488583626648 NA intron (NM_001289704, intron 1 of 9) intron (NM_001289704, intron 1 of 9) 780 NM_001293804 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak1_175_1314_0.178787592073355_10.4502408802163_2.6488464692175 chr11 103411875 103413203 + 2.6488464692175 NA intron (NM_183034, intron 1 of 11) CpG 125 NM_183034 353047 Mm.18556 NM_183034 ENSMUSG00000034247 Plekhm1 AP162|B2|BC038943|D330036J23Rik pleckstrin homology domain containing, family M (with RUN domain) member 1 protein-coding unique_peak2_39_175_0.458314920179835_7.68858907872722_2.64878035085317-2 chr8 105613397 105614625 + 2.64878035085317 NA intron (NM_001081241, intron 1 of 21) CpG -1455 NR_035492 100316712 NR_035492 ENSMUSG00000089432 Mir1966 mir-1966|mmu-mir-1966 microRNA 1966 ncRNA unique_peak2_39_175_0.458314920179835_7.68858907872722_2.64878035085317 chr6 113418735 113419856 + 2.64878035085317 NA promoter-TSS (NM_001033204) promoter-TSS (NM_001033204) 45 NM_001033204 101122 Mm.31204 NM_001033204 ENSMUSG00000051169 Rpusd3 AI527266 RNA pseudouridylate synthase domain containing 3 protein-coding common_peak1_351_3214_0.115643965224066_11.7084250048273_2.64793450121071 chr17 36270645 36272438 + 2.64793450121071 NA promoter-TSS (NM_178281) promoter-TSS (NM_178281) -108 NM_178281 79263 Mm.40624 NM_024468 ENSMUSG00000045409 Trim39 1100001D15Rik|E130103K13Rik|RBCC-B30.2|Rnf23|mKIAA4179|tfp tripartite motif-containing 39 protein-coding common_peak1_41_337_-0.396792481297329_8.20248319563352_2.64778839102349-2 chr9 66682685 66683587 + 2.64778839102349 NA Intergenic Intergenic -30550 NM_178396 76459 Mm.277921 NM_178396 ENSMUSG00000032373 Car12 2310047E01Rik|AI314958|CA-XII|Ca12 carbonic anhydrase 12 protein-coding common_peak1_41_337_-0.396792481297329_8.20248319563352_2.64778839102349 chr7 101108586 101109349 + 2.64778839102349 NA 5' UTR (NM_001146010, exon 1 of 20) 5' UTR (NM_001146010, exon 1 of 20) 192 NM_199012 207278 Mm.263041 NM_199012 ENSMUSG00000030691 Fchsd2 BC034086|R74866|Sh3md3|mKIAA0769 FCH and double SH3 domains 2 protein-coding common_peak2_42_345_-0.388901057382775_8.24017769894534_2.64739063552228-2 chr6 100823768 100824929 + 2.64739063552228 NA Intergenic B4A|SINE|B4 -9290 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak2_42_345_-0.388901057382775_8.24017769894534_2.64739063552228 chr13 38010043 38011349 + 2.64739063552228 NA intron (NM_027724, intron 11 of 12) intron (NM_027724, intron 11 of 12) -16506 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding common_peak2_149_1391_-0.186181476372704_10.3498527576624_2.64723883443508 chr5 129018962 129021362 + 2.64723883443508 NA promoter-TSS (NM_009391) promoter-TSS (NM_009391) 6 NM_009391 19384 Mm.297440 NM_009391 ENSMUSG00000029430 Ran - RAN, member RAS oncogene family protein-coding common_peak2_72_616_-0.286807652763789_9.12572285276752_2.64657988047515 chr3 146149348 146151084 + 2.64657988047515 NA promoter-TSS (NM_001005846) promoter-TSS (NM_001005846) 42 NM_001005846 68279 Mm.116862 NM_026656 ENSMUSG00000011008 Mcoln2 3300002C04Rik|AI549968|C86638|TRPML2 mucolipin 2 protein-coding common_peak2_72_616_-0.286807652763789_9.12572285276752_2.64657988047515-2 chrX 164075800 164077031 + 2.64657988047515 NA promoter-TSS (NM_009173) promoter-TSS (NM_009173) 78 NM_001308385 20438 Mm.37215 NM_009173 ENSMUSG00000040749 Siah1b AA960570|Sinh1b|siah-1b seven in absentia 1B protein-coding common_peak1_40_181_0.453648624866729_7.73461895263206_2.64595171011457-3 chr9 53383833 53384527 + 2.64595171011457 NA exon (NM_212445, exon 1 of 8) exon (NM_212445, exon 1 of 8) 157 NM_212445 68304 Mm.427519 NM_212445 ENSMUSG00000034487 Kdelc2 2010004J24Rik|4833410J10Rik|AW549401 KDEL (Lys-Asp-Glu-Leu) containing 2 protein-coding unique_peak2_40_181_0.453648624866729_7.73461895263206_2.64595171011457 chr10 82892268 82893611 + 2.64595171011457 NA intron (NM_001042514, intron 13 of 13) intron (NM_001042514, intron 13 of 13) 26313 NM_025499 66341 Mm.443284 NM_025499 ENSMUSG00000109864 Eid3 1700027M21Rik|NS4EB EP300 interacting inhibitor of differentiation 3 protein-coding common_peak1_40_181_0.453648624866729_7.73461895263206_2.64595171011457 chr10 39474624 39475547 + 2.64595171011457 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 105286 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_40_181_0.453648624866729_7.73461895263206_2.64595171011457-2 chr5 52669007 52669668 + 2.64595171011457 NA intron (NM_172490, intron 1 of 10) intron (NM_172490, intron 1 of 10) 364 NM_172490 211006 Mm.244719 NM_172490 ENSMUSG00000029173 Sepsecs AA986712|D5Ertd135e|SLA|SecS Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase protein-coding common_peak2_40_181_0.453648624866729_7.73461895263206_2.64595171011457 chr5 38857685 38858837 + 2.64595171011457 NA intron (NM_013748, intron 2 of 18) intron (NM_013748, intron 2 of 18) 18432 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak2_134_928_0.210778367335262_9.96492397005028_2.64579087718506 chr2 166548121 166551550 + 2.64579087718506 NA Intergenic Intergenic 102384 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak2_79_682_-0.271382918286601_9.28005030914679_2.64570564027938 chrX 48207974 48209692 + 2.64570564027938 NA promoter-TSS (NM_172465) promoter-TSS (NM_172465) -131 NM_172465 208884 Mm.207367 NM_172465 ENSMUSG00000036985 Zdhhc9 6430508G22|9530098M12Rik zinc finger, DHHC domain containing 9 protein-coding common_peak2_109_707_0.240297779489275_9.58775443982763_2.64566288317465 chrX 68677919 68679799 + 2.64566288317465 NA promoter-TSS (NR_033481) promoter-TSS (NR_033481) 318 NM_001290424 14265 Mm.3451 NM_008031 ENSMUSG00000000838 Fmr1 FMRP|Fmr-1 fragile X mental retardation syndrome 1 protein-coding unique_peak2_11_95_-0.797799343815417_6.18606282881345_2.64553091153294 chr5 25712591 25713285 + 2.64553091153294 NA Intergenic Intergenic -7141 NM_020570 57434 Mm.143767 NM_020570 ENSMUSG00000028933 Xrcc2 4921524O04Rik|8030409M04Rik|RAD51|RecA X-ray repair complementing defective repair in Chinese hamster cells 2 protein-coding common_peak1_34_277_-0.437495358199973_7.90019339362352_2.64525302185937 chr11 3334611 3335340 + 2.64525302185937 NA intron (NM_178149, intron 5 of 5) intron (NM_178149, intron 5 of 5) 4244 NM_178149 216505 Mm.390323 NM_178149 ENSMUSG00000034614 Pik3ip1 1500004A08Rik|5830455E04Rik|Crkd|Hgfl phosphoinositide-3-kinase interacting protein 1 protein-coding common_peak1_34_277_-0.437495358199973_7.90019339362352_2.64525302185937-2 chr6 128828145 128828784 + 2.64525302185937 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -2149 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak2_112_1006_-0.220328469834383_9.86568373308959_2.64475977004661 chr7 28961532 28963240 + 2.64475977004661 NA promoter-TSS (NM_021895) promoter-TSS (NM_021895) -106 NM_021895 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_163_1542_-0.176854459132596_10.5030951170044_2.64269343195673 chr19 5423784 5426431 + 2.64269343195673 NA promoter-TSS (NM_001256515) promoter-TSS (NM_001256515) -37 NM_134149 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak1_15_43_0.836821644487871_5.87784244088123_2.64247392621751-2 chr12 16509021 16509459 + 2.64247392621751 NA Intergenic Intergenic 80530 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak1_15_43_0.836821644487871_5.87784244088123_2.64247392621751-3 chr7 45332450 45332845 + 2.64247392621751 NA intron (NM_175130, intron 2 of 24) intron (NM_175130, intron 2 of 24) 1133 NM_175130 68667 Mm.439890 NM_175130 ENSMUSG00000038260 Trpm4 1110030C19Rik|AW047689|LTRPC4|LTrpC-4|TRPM4B transient receptor potential cation channel, subfamily M, member 4 protein-coding common_peak1_15_43_0.836821644487871_5.87784244088123_2.64247392621751 chr10 93164231 93164548 + 2.64247392621751 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 1604 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak2_192_1862_-0.160606666495379_10.7831086256939_2.64198516840044 chr4 98923340 98924817 + 2.64198516840044 NA 5' UTR (NM_146144, exon 1 of 9) 5' UTR (NM_146144, exon 1 of 9) 268 NM_146144 230484 Mm.371692 NM_146144 ENSMUSG00000028560 Usp1 - ubiquitin specific peptidase 1 protein-coding common_peak2_60_505_-0.318474123647338_8.82375651287064_2.64183020541426 chr5 4191957 4193348 + 2.64183020541426 NA intron (NM_001042670, intron 1 of 1) intron (NM_001042670, intron 1 of 1) 285 NM_001042670 208595 Mm.129815 NM_001042670 ENSMUSG00000053178 Mterf1b ENSMUSG00000053178|Gm9897 mitochondrial transcription termination factor 1b protein-coding unique_peak2_25_204_-0.524058854864514_7.41745067207319_2.64171825101935 chr2 174343583 174344947 + 2.64171825101935 NA intron (NM_001310083, intron 7 of 12) intron (NM_001310083, intron 7 of 12) 14176 NM_001077510 14683 Mm.125770 NM_010309 ENSMUSG00000027523 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus protein-coding common_peak1_25_204_-0.524058854864514_7.41745067207319_2.64171825101935 chr4 6681417 6681983 + 2.64171825101935 NA Intergenic Intergenic -227429 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding common_peak1_177_1334_0.177006653375628_10.4711273532627_2.6416350502266 chr17 84140023 84142470 + 2.6416350502266 NA Intergenic Intergenic 46701 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_29_236_-0.480086816300556_7.64869984074798_2.64118793815136 chr9 107541812 107542339 + 2.64118793815136 NA promoter-TSS (NM_019720) promoter-TSS (NM_019720) -134 NM_018879 56032 Mm.11337 NM_018879 ENSMUSG00000010057 Nprl2 2810446G01Rik|G21|NPR2L|Tusc4 nitrogen permease regulator-like 2 protein-coding unique_peak1_12_30_0.974612623067702_5.44150262192073_2.64075047711344-2 chr9 32731039 32731349 + 2.64075047711344 NA intron (NM_011808, intron 3 of 7) intron (NM_011808, intron 3 of 7) 35152 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding unique_peak1_12_30_0.974612623067702_5.44150262192073_2.64075047711344 chr4 55356047 55356439 + 2.64075047711344 NA intron (NM_009011, intron 1 of 9) B1_Mm|SINE|Alu 6201 NM_009011 19359 Mm.196846 NM_009011 ENSMUSG00000028426 Rad23b 0610007D13Rik|AV001138|HR23B|mHR23B|p58 RAD23 homolog B, nucleotide excision repair protein protein-coding common_peak1_17_52_0.776764907309468_6.11630290821793_2.64020658833854 chr11 46370195 46370639 + 2.64020658833854 NA intron (NM_001281965, intron 1 of 16) intron (NM_001281965, intron 1 of 16) 19098 NM_001281968 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding unique_peak1_17_52_0.776764907309468_6.11630290821793_2.64020658833854 chr9 92376984 92377443 + 2.64020658833854 NA Intergenic Intergenic 67836 NM_001033184 78459 Mm.179195 NM_001033184 ENSMUSG00000074139 1700057G04Rik - RIKEN cDNA 1700057G04 gene protein-coding common_peak1_17_52_0.776764907309468_6.11630290821793_2.64020658833854-3 chr9 15020883 15021364 + 2.64020658833854 NA intron (NM_019482, intron 2 of 4) intron (NM_019482, intron 2 of 4) 24355 NM_019482 55991 Mm.142253 NM_019482 ENSMUSG00000031934 Panx1 AI847747 pannexin 1 protein-coding common_peak1_17_52_0.776764907309468_6.11630290821793_2.64020658833854-2 chr4 33261094 33261476 + 2.64020658833854 NA Intergenic Intergenic -12498 NM_001033225 108767 Mm.27769 NM_001033225 ENSMUSG00000040128 Pnrc1 5730463C12Rik|B4-2|PRR2|Prol2 proline-rich nuclear receptor coactivator 1 protein-coding common_peak1_43_354_-0.385265160511738_8.27904263413618_2.64017134601826-3 chr4 133338815 133339541 + 2.64017134601826 NA 5' UTR (NM_199306, exon 1 of 16) 5' UTR (NM_199306, exon 1 of 16) 137 NM_199306 230796 Mm.226576 NM_199306 ENSMUSG00000037622 Wdtc1 Gm695|adipose|adp WD and tetratricopeptide repeats 1 protein-coding common_peak1_43_354_-0.385265160511738_8.27904263413618_2.64017134601826 chr12 69356393 69357413 + 2.64017134601826 NA intron (NM_025441, intron 1 of 32) CpG 273 NM_025441 66244 Mm.46705 NM_025441 ENSMUSG00000020982 Nemf 1500011I12Rik|4933405E14Rik|Sdccag1 nuclear export mediator factor protein-coding common_peak1_43_354_-0.385265160511738_8.27904263413618_2.64017134601826-2 chr16 43655396 43656254 + 2.64017134601826 NA intron (NM_001146325, intron 3 of 3) intron (NM_001146325, intron 3 of 3) 8359 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding unique_peak2_33_138_0.511207499437019_7.37454482244202_2.64013293092785 chr3 152153245 152154657 + 2.64013293092785 NA intron (NM_016867, intron 1 of 5) intron (NM_016867, intron 1 of 5) 11949 NM_016867 54120 Mm.97 NM_016867 ENSMUSG00000039131 Gipc2 2200002N01Rik|AU021850|Semcap2 GIPC PDZ domain containing family, member 2 protein-coding common_peak1_33_138_0.511207499437019_7.37454482244202_2.64013293092785 chr5 123985309 123986055 + 2.64013293092785 NA intron (NM_145070, intron 1 of 31) intron (NM_145070, intron 1 of 31) -11170 NR_105999 102465625 NR_105999 ENSMUSG00000098454 Mir7032 Gm27309|mmu-mir-7032 microRNA 7032 ncRNA common_peak1_99_876_-0.237193217935637_9.65783642347691_2.63916046162419 chr7 30563309 30564160 + 2.63916046162419 NA promoter-TSS (NM_025498) promoter-TSS (NM_025498) 394 NM_170760 233073 Mm.34790 NM_170760 ENSMUSG00000078765 U2af1l4 AA407033|AF419339|AI451269|AW553050|U2af26 U2 small nuclear RNA auxiliary factor 1-like 4 protein-coding common_peak2_119_1078_-0.2135980945176_9.96868010222922_2.63877554807552-2 chr19 10604539 10606339 + 2.63877554807552 NA promoter-TSS (NM_015735) promoter-TSS (NM_015735) -186 NM_015735 13194 Mm.289915 NM_015735 ENSMUSG00000024740 Ddb1 127kDa|AA408517|p127-Ddb1 damage specific DNA binding protein 1 protein-coding common_peak2_119_1078_-0.2135980945176_9.96868010222922_2.63877554807552 chr15 12823843 12825607 + 2.63877554807552 NA promoter-TSS (NM_001130149) promoter-TSS (NM_001130149) -68 NM_001166360 77877 Mm.207311 NM_029998 ENSMUSG00000022195 6030458C11Rik - RIKEN cDNA 6030458C11 gene protein-coding common_peak2_57_477_-0.325591182281823_8.73807121683984_2.63835583571595-3 chr7 141413383 141414928 + 2.63835583571595 NA promoter-TSS (NM_172116) promoter-TSS (NM_172116) -30 NM_172116 213350 Mm.290953 NM_172116 ENSMUSG00000051007 Pddc1 BC023835|D230016J19Rik Parkinson disease 7 domain containing 1 protein-coding common_peak2_57_477_-0.325591182281823_8.73807121683984_2.63835583571595-2 chr15 64185417 64186671 + 2.63835583571595 NA intron (NM_001276462, intron 3 of 27) intron (NM_001276462, intron 3 of 27) -125596 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_57_477_-0.325591182281823_8.73807121683984_2.63835583571595 chr11 60699097 60700446 + 2.63835583571595 NA promoter-TSS (NM_001159405) promoter-TSS (NM_001159405) 81 NM_008502 16897 Mm.285453 NM_008502 ENSMUSG00000020536 Llgl1 AI325176|Lgl1|Llglh|Mgl1 lethal giant larvae homolog 1 (Drosophila) protein-coding common_peak1_199_1940_-0.156732277018211_10.8442182642046_2.6382865935122 chr16 78575517 78577311 + 2.6382865935122 NA 5' UTR (NM_001252438, exon 1 of 5) 5' UTR (NM_001252438, exon 1 of 5) 274 NM_001252438 67102 Mm.37332 NM_025967 ENSMUSG00000022864 D16Ertd472e 1700010I10Rik|2310009O17Rik|E330003K22Rik|Eurl DNA segment, Chr 16, ERATO Doi 472, expressed protein-coding common_peak2_85_508_0.28081763536461_9.131930663758_2.63822083816707 chr15 78841982 78843732 + 2.63822083816707 NA intron (NM_027219, intron 1 of 2) CpG 210 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak1_367_3403_0.111894727152968_11.7889626852624_2.63731889847495 chr3 69125521 69127916 + 2.63731889847495 NA intron (NM_008467, intron 1 of 16) CpG 374 NM_008467 16649 Mm.30601 NM_008467 ENSMUSG00000027782 Kpna4 1110058D08Rik|IPOA3 karyopherin (importin) alpha 4 protein-coding common_peak2_145_1349_-0.189812354366207_10.3038375147551_2.63660900655958 chr10 91081705 91083975 + 2.63660900655958 NA promoter-TSS (NM_001042558) promoter-TSS (NM_001042558) -97 NM_009684 11783 Mm.220289 NM_009684 ENSMUSG00000019979 Apaf1 6230400I06Rik|Apaf-1|Apaf1l|fog|mKIAA0413 apoptotic peptidase activating factor 1 protein-coding common_peak2_115_1037_-0.2177027914726_9.91073933262158_2.63623840505188 chr5 77309031 77311201 + 2.63623840505188 NA promoter-TSS (NM_153798) promoter-TSS (NM_153798) -30 NM_019836 56412 Mm.129136 NM_019836 ENSMUSG00000036285 Noa1 2610024G14Rik|AU022345|AtNOS1|mAtNOS1 nitric oxide associated 1 protein-coding common_peak1_133_919_0.211665960391704_9.95132303114023_2.63615968572534 chr7 99979465 99980540 + 2.63615968572534 NA exon (NM_175388, exon 1 of 6) exon (NM_175388, exon 1 of 6) 456 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding common_peak1_45_371_-0.374085695828166_8.35211596319395_2.63595397441872 chr12 100187677 100188270 + 2.63595397441872 NA promoter-TSS (NR_045282) promoter-TSS (NR_045282) 5 NR_045282 100038378 Mm.387075 NR_045282 ENSMUSG00000072884 Gm10433 ENSMUSG00000072884 predicted gene 10433 ncRNA common_peak2_45_371_-0.374085695828166_8.35211596319395_2.63595397441872 chr11 115627439 115628744 + 2.63595397441872 NA 5' UTR (NM_001252395, exon 1 of 8) 5' UTR (NM_001252395, exon 1 of 8) 204 NM_001252394 67283 Mm.383426 NM_026071 ENSMUSG00000020744 Slc25a19 2900089E13Rik|DNC|MUP1|TPC solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein-coding common_peak1_89_778_-0.252688569310681_9.47913523340633_2.63555591286317 chr14 64732241 64733836 + 2.63555591286317 NA intron (NM_001081177, intron 10 of 39) intron (NM_001081177, intron 10 of 39) 80507 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak1_94_827_-0.245017167224113_9.57097837388727_2.63518732270327 chr1 192091746 192092985 + 2.63518732270327 NA 5' UTR (NM_011633, exon 1 of 10) 5' UTR (NM_011633, exon 1 of 10) 234 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak2_312_3276_-0.119716761548547_11.6183015767685_2.63468127808451 chr4 137599038 137606466 + 2.63468127808451 NA intron (NM_130879, intron 1 of 27) intron (NM_130879, intron 1 of 27) 8563 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak1_47_388_-0.363238565707741_8.42200706213232_2.63466069871679 chr10 117745977 117746869 + 2.63466069871679 NA promoter-TSS (NM_029875) promoter-TSS (NM_029875) -65 NM_029875 215436 Mm.256753 NM_029875 ENSMUSG00000060181 Slc35e3 9330166G04Rik|AI481200 solute carrier family 35, member E3 protein-coding common_peak2_55_459_-0.332312989740094_8.67933355607433_2.63464217257691 chr1 161798261 161800426 + 2.63464217257691 NA Intergenic Intergenic -10848 NM_010177 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_55_459_-0.332312989740094_8.67933355607433_2.63464217257691 chr11 40693073 40693967 + 2.63464217257691 NA promoter-TSS (NM_134017) promoter-TSS (NM_134017) -838 NM_134017 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak2_209_1655_0.158705584363851_10.7728397496812_2.63457278435578 chr17 45432368 45434490 + 2.63457278435578 NA promoter-TSS (NR_130961) promoter-TSS (NR_130961) 278 NM_152810 71702 Mm.28270 NM_152810 ENSMUSG00000023932 Cdc5l 1200002I02Rik|AA408004|PCDC5RP cell division cycle 5-like (S. pombe) protein-coding common_peak1_420_4039_0.102873666212863_12.0315764107456_2.6342157535962 chr11 23254711 23257978 + 2.6342157535962 NA intron (NM_001035226, intron 1 of 25) CpG 303 NM_134014 103573 Mm.217547 NM_134014 ENSMUSG00000020290 Xpo1 AA420417|Crm1|Exp1 exportin 1 protein-coding common_peak2_61_325_0.344566361689585_8.52101133507587_2.63419035975623 chr1 131089214 131091069 + 2.63419035975623 NA intron (NM_008551, intron 1 of 9) intron (NM_008551, intron 1 of 9) 7702 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding common_peak1_61_325_0.344566361689585_8.52101133507587_2.63419035975623 chr11 83624627 83625655 + 2.63419035975623 NA Intergenic GA-rich|Low_complexity|Low_complexity 24237 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak2_41_188_0.441844530763782_7.78316468960296_2.63366153733565 chr11 88187546 88188434 + 2.63366153733565 NA intron (NM_198013, intron 7 of 10) intron (NM_198013, intron 7 of 10) -6116 NM_001291270 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding common_peak2_41_188_0.441844530763782_7.78316468960296_2.63366153733565-2 chr15 85909379 85910479 + 2.63366153733565 NA intron (NM_009886, intron 24 of 34) intron (NM_009886, intron 24 of 34) 30602 NM_028063 72026 Mm.158211 NM_028063 ENSMUSG00000022386 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding common_peak1_54_450_-0.335692604869465_8.64913732082065_2.63347832674357 chr3 9827708 9828764 + 2.63347832674357 NA intron (NM_001195031, intron 1 of 8) intron (NM_001195031, intron 1 of 8) 5443 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding common_peak1_42_194_0.43839685650434_7.82652874200178_2.63335138409442 chr15 58214183 58214923 + 2.63335138409442 NA exon (NM_026346, exon 1 of 9) exon (NM_026346, exon 1 of 9) 339 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding common_peak2_42_194_0.43839685650434_7.82652874200178_2.63335138409442 chr5 108433692 108434568 + 2.63335138409442 NA intron (NM_007507, intron 1 of 3) CpG-11302 248 NM_007507 11958 Mm.136093 NM_007507 ENSMUSG00000050856 Atp5k 2610008D24Rik|Atp5i|Lfm1 ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit E protein-coding common_peak1_184_1403_0.17256201778517_10.5416082291971_2.6332881749959 chr11 83301994 83303569 + 2.6332881749959 NA promoter-TSS (NM_001035854) promoter-TSS (NM_001035854) 84 NM_001035854 71770 Mm.39053 NM_027915 ENSMUSG00000035152 Ap2b1 1300012O03Rik|AI788979 adaptor-related protein complex 2, beta 1 subunit protein-coding common_peak1_286_2476_0.130601221084532_11.3396787637886_2.63302831748021 chr13 59822121 59823719 + 2.63302831748021 NA intron (NM_153538, intron 1 of 27) CpG 227 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding common_peak1_77_663_-0.275483670552708_9.23729759607057_2.63289594158999 chr8 88118662 88119542 + 2.63289594158999 NA intron (NM_029074, intron 1 of 5) intron (NM_029074, intron 1 of 5) 343 NM_029074 382030 Mm.216574 NM_029074 ENSMUSG00000036810 Cnep1r1 5033428A16Rik|NEP1-R1|Tmem188 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding common_peak2_26_211_-0.505712887723604_7.4750640107014_2.63128021971585-2 chr8 121947583 121948794 + 2.63128021971585 NA Intergenic Intergenic -2304 NM_016812 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak2_26_211_-0.505712887723604_7.4750640107014_2.63128021971585 chr4 134102152 134103164 + 2.63128021971585 NA promoter-TSS (NR_045571) promoter-TSS (NR_045571) 75 NM_026257 67586 Mm.282029 NM_026257 ENSMUSG00000012126 Ubxn11 4930506L07Rik|D4Bwg1540e|Soc|Soci|Ubxd5 UBX domain protein 11 protein-coding common_peak1_170_1618_-0.172254034599108_10.574760253003_2.63102297344631 chr5 53998231 53999700 + 2.63102297344631 NA exon (NM_001081103, exon 1 of 12) exon (NM_001081103, exon 1 of 12) 442 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak2_138_1274_-0.194296750953619_10.2191331562694_2.63065147750051 chr2 157200508 157202864 + 2.63065147750051 NA intron (NM_011249, intron 1 of 21) intron (NM_011249, intron 1 of 21) 2848 NM_011249 19650 Mm.244671 NM_011249 ENSMUSG00000027641 Rbl1 AW547426|PRB1|p107 retinoblastoma-like 1 (p107) protein-coding common_peak2_99_623_0.253837595646846_9.41232101668567_2.62979176890985 chr11 11655953 11658197 + 2.62979176890985 NA Intergenic Intergenic -28850 NM_009578 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_145_1030_0.199102720203877_10.10937997747_2.62895444259024 chr17 28222633 28224953 + 2.62895444259024 NA intron (NM_027185, intron 6 of 10) CpG -8961 NM_011145 19015 Mm.328914 NM_011145 ENSMUSG00000002250 Ppard NUC-1|NUC1|Nr1c2|PPAR-beta|PPAR-delta|PPAR[b]|PPARdelta|Pparb|Pparb/d peroxisome proliferator activator receptor delta protein-coding common_peak1_68_578_-0.294824217742441_9.03000742911802_2.62867538176442 chr12 100508757 100509831 + 2.62867538176442 NA intron (NM_001033213, intron 1 of 19) intron (NM_001033213, intron 1 of 19) 11528 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak1_68_578_-0.294824217742441_9.03000742911802_2.62867538176442-2 chr19 6868878 6869929 + 2.62867538176442 NA Intergenic RLTR19-int|LTR|ERVK -11192 NM_001081291 78317 Mm.329596 NM_198008 ENSMUSG00000047810 Ccdc88b 2610041P08Rik|Ccdc88 coiled-coil domain containing 88B protein-coding common_peak1_34_144_0.501536624508599_7.43067740226923_2.62816485178529 chr11 67521153 67521926 + 2.62816485178529 NA Intergenic MIR|SINE|MIR -11459 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_236_1935_0.147370369992007_10.9925484222706_2.62742453085815 chr4 138215746 138218456 + 2.62742453085815 NA promoter-TSS (NM_001122897) promoter-TSS (NM_001122897) -26 NM_001122897 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding unique_peak2_20_164_-0.588847570447318_7.07189842902216_2.62718104203579-2 chr9 119265058 119265992 + 2.62718104203579 NA intron (NM_133985, intron 7 of 17) B4A|SINE|B4 -33833 NR_033303 109280 Mm.261557 NM_175420 ENSMUSG00000092212 Slc22a13b-ps 9330176C04Rik|Slc22a13b solute carrier family 22 (organic cation transporter), member 13b, pseudogene pseudo unique_peak2_20_164_-0.588847570447318_7.07189842902216_2.62718104203579 chr17 30362676 30363634 + 2.62718104203579 NA intron (NM_172618, intron 6 of 11) B1_Mus1|SINE|Alu 33025 NR_030688 623169 Mm.440508 NR_030688 Gm6402 EG623169 ribosomal protein S17 pseudogene pseudo common_peak1_51_424_-0.349285475197776_8.55667629342618_2.626951950246 chr15 60125298 60126333 + 2.626951950246 NA Intergenic (GGAA)n|Simple_repeat|Simple_repeat -109197 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding unique_peak2_30_244_-0.469955734268265_7.70166007186844_2.62628159607359 chr3 131333876 131335548 + 2.62628159607359 NA intron (NM_028943, intron 3 of 5) intron (NM_028943, intron 3 of 5) 10211 NM_028943 74442 Mm.273360 NM_028943 ENSMUSG00000050931 Sgms2 4933405A16Rik|5133401H06Rik|AI854299 sphingomyelin synthase 2 protein-coding common_peak2_350_3749_-0.111462398356176_11.8169436810925_2.62598243067689 chr11 96462786 96468928 + 2.62598243067689 NA intron (NM_001033186, intron 1 of 12) intron (NM_001033186, intron 1 of 12) 1266 NM_001177898 78473 Mm.395840 NM_001033186 ENSMUSG00000057058 Skap1 1700091G21Rik|Scap1|Skap-55 src family associated phosphoprotein 1 protein-coding common_peak1_23_187_-0.540813383585543_7.28418215988487_2.62584356899493 chr15 75969037 75969549 + 2.62584356899493 NA 5' UTR (NM_001081065, exon 1 of 4) 5' UTR (NM_001081065, exon 1 of 4) 108 NM_001081065 69020 Mm.294295 NM_001081065 ENSMUSG00000034429 Zfp707 1500031N24Rik|AI451708|AW495315 zinc finger protein 707 protein-coding common_peak1_103_657_0.246702093278403_9.48529482037444_2.62579088402589 chr10 41302350 41303378 + 2.62579088402589 NA intron (NM_133999, intron 1 of 22) CpG 377 NM_133999 103199 Mm.277242 NM_133999 ENSMUSG00000038417 Fig4 A530089I17Rik|AI326867|Sac3 FIG4 phosphoinositide 5-phosphatase protein-coding common_peak2_121_1098_-0.210843908715903_9.99655371659128_2.62551326698722-2 chr8 70872662 70874106 + 2.62551326698722 NA intron (NM_026964, intron 1 of 4) CpG 106 NM_026964 234388 Mm.295791 NM_026964 ENSMUSG00000007721 Ccdc124 1810023B24Rik coiled-coil domain containing 124 protein-coding common_peak2_121_1098_-0.210843908715903_9.99655371659128_2.62551326698722 chr7 80946780 80948484 + 2.62551326698722 NA promoter-TSS (NM_019951) promoter-TSS (NM_019951) -82 NM_019951 56529 Mm.43760 NM_019951 ENSMUSG00000025724 Sec11a 1810012E07Rik|18kDa|Sec11l1|Sid2895p|Spc18|sid2895 SEC11 homolog A, signal peptidase complex subunit protein-coding common_peak1_59_311_0.349866524921811_8.46033548132315_2.62505984930642 chr19 46700022 46701006 + 2.62505984930642 NA intron (NM_025563, intron 3 of 4) intron (NM_025563, intron 3 of 4) -6929 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak2_59_311_0.349866524921811_8.46033548132315_2.62505984930642 chr3 108257102 108258167 + 2.62505984930642 NA intron (NM_011967, intron 1 of 8) intron (NM_011967, intron 1 of 8) 708 NM_011967 26442 Mm.208883 NM_011967 ENSMUSG00000068749 Psma5 ZETA proteasome (prosome, macropain) subunit, alpha type 5 protein-coding unique_peak2_14_118_-0.712773641896596_6.53843094235965_2.6250316740845-3 chr3 143585224 143585994 + 2.6250316740845 NA Intergenic Intergenic 126534 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA common_peak1_14_118_-0.712773641896596_6.53843094235965_2.6250316740845 chr8 122989395 122989802 + 2.6250316740845 NA intron (NR_037865, intron 1 of 13) intron (NR_037865, intron 1 of 13) 52686 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak2_14_118_-0.712773641896596_6.53843094235965_2.6250316740845 chr1 21311155 21312227 + 2.6250316740845 NA Intergenic RLTR12D|LTR|ERVK -13379 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo unique_peak2_14_118_-0.712773641896596_6.53843094235965_2.6250316740845-2 chr12 4219730 4220978 + 2.6250316740845 NA intron (NM_134046, intron 3 of 6) intron (NM_134046, intron 3 of 6) -13673 NM_001204912 69709 Mm.250552 NM_001204912 ENSMUSG00000096199 Ptrhd1 2410017P09Rik peptidyl-tRNA hydrolase domain containing 1 protein-coding common_peak2_131_1201_-0.200676610677595_10.1308828753724_2.62462043743069 chr8 116920700 116922528 + 2.62462043743069 NA promoter-TSS (NM_028131) promoter-TSS (NM_028131) -126 NM_028131 72155 Mm.23185 NM_028131 ENSMUSG00000031756 Cenpn 2610510J17Rik|AI426416|AW545024 centromere protein N protein-coding common_peak1_57_296_0.360956504898159_8.39479737324985_2.62457056619315 chr1 40382198 40383398 + 2.62457056619315 NA Intergenic Intergenic -46772 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_57_296_0.360956504898159_8.39479737324985_2.62457056619315-2 chr14 60706895 60708127 + 2.62457056619315 NA intron (NM_001033272, intron 3 of 12) ID4|SINE|ID -25393 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak2_43_201_0.428198571128513_7.87231076831605_2.62404781456261 chr8 13869326 13870510 + 2.62404781456261 NA intron (NM_181854, intron 1 of 1) CpG 277 NM_181854 101994 Mm.289346 NM_181854 ENSMUSG00000047710 Champ1 AA675043|AI116001|D8Ertd457e|D8Ertd569e|Zfp828|Znf828|mKIAA1802 chromosome alignment maintaining phosphoprotein 1 protein-coding common_peak2_18_148_-0.618804317065271_6.90976636192953_2.62328036630828 chr10 111577989 111578996 + 2.62328036630828 NA Intergenic B1_Mus1|SINE|Alu 15781 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak2_18_148_-0.618804317065271_6.90976636192953_2.62328036630828-2 chr4 115000121 115000821 + 2.62328036630828 NA intron (NM_001304551, intron 1 of 15) intron (NM_001304551, intron 1 of 15) 353 NM_001304555 20460 Mm.3988 NM_009185 ENSMUSG00000028718 Stil Sil Scl/Tal1 interrupting locus protein-coding common_peak1_18_148_-0.618804317065271_6.90976636192953_2.62328036630828-2 chr9 54612436 54612874 + 2.62328036630828 NA intron (NM_053178, intron 11 of 13) B1_Mur4|SINE|Alu 26144 NM_029573 67834 Mm.279195 NM_029573 ENSMUSG00000032279 Idh3a 1110003P10Rik|1500012E04Rik|AA407078|AI316514 isocitrate dehydrogenase 3 (NAD+) alpha protein-coding common_peak1_18_148_-0.618804317065271_6.90976636192953_2.62328036630828 chr8 105701681 105702061 + 2.62328036630828 NA promoter-TSS (NM_001012638) promoter-TSS (NM_001012638) 224 NM_001286345 56513 Mm.472753 NM_019695 ENSMUSG00000005699 Pard6a 0710008C04Rik|2610010A15Rik|PAR-6A|PAR6alpha|Par-6|Par6|Par6c|TAX40|Tip-40 par-6 family cell polarity regulator alpha protein-coding common_peak1_135_938_0.208391846879467_9.97917727109351_2.62256870835697 chr10 80248956 80250302 + 2.62256870835697 NA intron (NM_029272, intron 1 of 7) intron (NM_029272, intron 1 of 7) 177 NM_029272 75406 Mm.28712 NM_029272 ENSMUSG00000020153 Ndufs7 1010001M04Rik NADH dehydrogenase (ubiquinone) Fe-S protein 7 protein-coding common_peak1_36_294_-0.424787493037794_7.99217739773031_2.6225095254382-2 chr4 98436022 98436676 + 2.6225095254382 NA intron (NM_172696, intron 11 of 43) intron (NM_172696, intron 11 of 43) 40523 NM_172696 12695 Mm.90218 NM_007704 ENSMUSG00000061859 Patj Cipp|Inadl PATJ, crumbs cell polarity complex component protein-coding common_peak1_36_294_-0.424787493037794_7.99217739773031_2.6225095254382 chr15 76343445 76344015 + 2.6225095254382 NA intron (NM_025567, intron 1 of 6) CpG 207 NM_025567 66445 Mm.29196 NM_025567 ENSMUSG00000022551 Cyc1 2610002H19Rik|AA408921|Cyct1 cytochrome c-1 protein-coding common_peak2_69_384_0.319343390127626_8.74838633064608_2.62205684499401 chr1 88635848 88637786 + 2.62205684499401 NA Intergenic RMER17C2|LTR|ERVK 65374 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak2_69_384_0.319343390127626_8.74838633064608_2.62205684499401-2 chr15 73174627 73177421 + 2.62205684499401 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 8923 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak2_118_786_0.226852544732157_9.73364609787357_2.62185264950207 chr6 71908282 71909923 + 2.62185264950207 NA promoter-TSS (NM_009088) promoter-TSS (NM_009088) 49 NM_009088 20019 Mm.135581 NM_009088 ENSMUSG00000049553 Polr1a 194kDa|3010014K16Rik|RPA194|Rpo1-4|mRPA1 polymerase (RNA) I polypeptide A protein-coding common_peak2_101_895_-0.233071833743791_9.69081900518571_2.6216411285569 chr15 97355065 97357051 + 2.6216411285569 NA intron (NM_172293, intron 3 of 5) URR1A|DNA|hAT-Charlie -108771 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak2_66_559_-0.298739316795244_8.97991335854735_2.62134531915788 chr16 93710829 93712640 + 2.62134531915788 NA promoter-TSS (NM_027293) promoter-TSS (NM_027293) -173 NM_026700 70028 Mm.23230 NM_026700 ENSMUSG00000022946 Dopey2 0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933 dopey family member 2 protein-coding common_peak1_81_700_-0.265215057758841_9.3206631051312_2.62110973800342 chr17 46890643 46891632 + 2.62110973800342 NA exon (NM_178385, exon 1 of 1) exon (NM_178385, exon 1 of 1) 516 NM_178385 72726 Mm.33780 NM_178385 ENSMUSG00000036430 Tbcc 2810055C19Rik tubulin-specific chaperone C protein-coding common_peak2_150_1076_0.195717850441344_10.1706614597649_2.62090627205258 chr7 39551841 39553926 + 2.62090627205258 NA Intergenic Intergenic 35117 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak1_92_807_-0.247394761864205_9.53451410181969_2.62062763671393 chr11 61652536 61653878 + 2.62062763671393 NA promoter-TSS (NM_027817) promoter-TSS (NM_027817) -114 NM_027817 71520 Mm.202760 NM_027817 ENSMUSG00000004837 Grap 8430435N19Rik|BB233594 GRB2-related adaptor protein protein-coding common_peak1_77_446_0.295424739610899_8.95184339098877_2.62047442804413 chr11 78536433 78537041 + 2.62047442804413 NA promoter-TSS (NM_001159392) promoter-TSS (NM_001159392) 301 NM_018854 55978 Mm.358671 NM_018854 ENSMUSG00000001105 Ift20 0610009H04Rik|AU015496 intraflagellar transport 20 protein-coding common_peak1_29_115_0.550675437470131_7.13331871386264_2.62036193244512 chr11 79130374 79131039 + 2.62036193244512 NA intron (NM_013571, intron 1 of 17) intron (NM_013571, intron 1 of 17) 15648 NM_013571 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb kinase suppressor of ras 1 protein-coding common_peak1_98_615_0.254667923119262_9.39412050225453_2.62032710254457 chr10 85101943 85103341 + 2.62032710254457 NA promoter-TSS (NM_001013028) promoter-TSS (NM_001013028) 15 NM_001013028 103266 Mm.335025 NM_001013028 ENSMUSG00000060935 Tmem263 AI597468 transmembrane protein 263 protein-coding common_peak2_109_975_-0.222834007990615_9.81932033356758_2.61998686946542 chr14 73387635 73390228 + 2.61998686946542 NA Intergenic Intergenic -3660 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak1_109_975_-0.222834007990615_9.81932033356758_2.61998686946542 chr11 98472421 98473817 + 2.61998686946542 NA intron (NM_011771, intron 7 of 7) CT-rich|Low_complexity|Low_complexity 26285 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak2_127_1159_-0.203818893330698_10.0779996433496_2.61917207452094 chr2 166504076 166507280 + 2.61917207452094 NA Intergenic Intergenic 58227 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak2_22_77_0.653058585231261_6.61193151147788_2.61914454099104 chr4 88550373 88550971 + 2.61914454099104 NA Intergenic Intergenic 7573 NM_206870 242517 Mm.377261 NM_206870 ENSMUSG00000096011 Ifna15 Gm12597|Ifnaa|MuIFN-alpha-A|OTTMUSG00000007655 interferon alpha 15 protein-coding unique_peak1_22_77_0.653058585231261_6.61193151147788_2.61914454099104 chr2 180695559 180696196 + 2.61914454099104 NA intron (NM_001291432, intron 1 of 5) intron (NM_001291432, intron 1 of 5) -3829 NR_111965 23856 Mm.253836 NM_011805 ENSMUSG00000038914 Dido1 6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido death inducer-obliterator 1 protein-coding common_peak1_22_77_0.653058585231261_6.61193151147788_2.61914454099104 chr12 40381106 40381658 + 2.61914454099104 NA intron (NM_178845, intron 1 of 11) intron (NM_178845, intron 1 of 11) 64408 NM_172575 246196 Mm.26852 NM_172575 ENSMUSG00000055917 Zfp277 2410017E24Rik|NIRF4 zinc finger protein 277 protein-coding common_peak2_114_751_0.231977539294192_9.67057762132473_2.61908357082015 chr13 86046005 86047020 + 2.61908357082015 NA intron (NM_007749, intron 1 of 2) CpG 283 NM_007749 12867 Mm.378898 NM_007749 ENSMUSG00000017778 Cox7c COXVIIc|Cox7c1 cytochrome c oxidase subunit VIIc protein-coding common_peak2_429_4150_0.101201851715018_12.0698441424611_2.61884875260322 chr2 156178419 156181744 + 2.61884875260322 NA promoter-TSS (NM_001291115) promoter-TSS (NM_001291115) 157 NM_001291114 170791 Mm.392436 NM_133242 ENSMUSG00000027620 Rbm39 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|R75070|Rnpc2|caper RNA binding motif protein 39 protein-coding common_peak1_25_93_0.600832392963294_6.85500504815928_2.61884384443812-2 chr2 167830684 167831301 + 2.61884384443812 NA Intergenic Intergenic -101335 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding unique_peak2_25_93_0.600832392963294_6.85500504815928_2.61884384443812 chr3 88440403 88441042 + 2.61884384443812 NA TTS (NR_105978) TTS (NR_105978) 229 NR_105978 102465611 NR_105978 ENSMUSG00000098655 Mir7011 Gm27677|mmu-mir-7011 microRNA 7011 ncRNA common_peak1_25_93_0.600832392963294_6.85500504815928_2.61884384443812-3 chr9 45242421 45242966 + 2.61884384443812 NA intron (NM_001198971, intron 2 of 4) intron (NM_001198971, intron 2 of 4) 24014 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak1_25_93_0.600832392963294_6.85500504815928_2.61884384443812 chr17 64754342 64754723 + 2.61884384443812 NA 3' UTR (NM_008549, exon 22 of 22) 3' UTR (NM_008549, exon 22 of 22) -12579 NR_105051 101202683 Mm.393309 NR_105051 Dreh - down-regulated in hepatocellular carcinoma ncRNA common_peak2_25_93_0.600832392963294_6.85500504815928_2.61884384443812 chr6 65661747 65662469 + 2.61884384443812 NA Intergenic Intergenic -9503 NM_172399 68169 Mm.52392 NM_172399 ENSMUSG00000049001 Ndnf A930038C07Rik|epidermacan neuron-derived neurotrophic factor protein-coding common_peak2_144_1021_0.199589420453268_10.0969741911643_2.61871747403429 chr14 32158899 32160842 + 2.61871747403429 NA promoter-TSS (NM_001033988) promoter-TSS (NM_001033988) -17 NM_001033988 27057 Mm.371598 NM_019744 ENSMUSG00000056234 Ncoa4 ARA70|Rfg nuclear receptor coactivator 4 protein-coding common_peak2_35_150_0.492892933733945_7.48485120619205_2.6182772682666 chr7 130645435 130646952 + 2.6182772682666 NA intron (NM_001004468, intron 3 of 21) CpG -46363 NM_021314 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak1_54_275_0.372766561607747_8.29490773758204_2.61783773620779 chr8 72215568 72216658 + 2.61783773620779 NA Intergenic Intergenic -3276 NM_001080812 234421 Mm.211247 NM_001080812 ENSMUSG00000074240 Cib3 C730014M21Rik|Gm1107|KIP3 calcium and integrin binding family member 3 protein-coding common_peak1_47_227_0.40749776511371_8.0366388967216_2.61781355119526 chr7 12922322 12922855 + 2.61781355119526 NA intron (NM_009095, intron 1 of 5) intron (NM_009095, intron 1 of 5) 277 NM_009095 20103 Mm.5291 NM_009095 ENSMUSG00000012848 Rps5 AA617411 ribosomal protein S5 protein-coding common_peak2_320_3374_-0.117566851316498_11.6618883611673_2.61775743739815 chr1 125429575 125435812 + 2.61775743739815 NA intron (NM_023735, intron 1 of 11) ID4_|SINE|ID 3034 NM_023735 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak2_53_268_0.377357515469328_8.26014112029129_2.61678992029931-2 chr13 114845126 114846763 + 2.61678992029931 NA intron (NM_008396, intron 25 of 29) intron (NM_008396, intron 25 of 29) 27707 NM_001113374 17434 Mm.19027 NM_013826 ENSMUSG00000015536 Mocs2 AI415403 molybdenum cofactor synthesis 2 protein-coding common_peak2_53_268_0.377357515469328_8.26014112029129_2.61678992029931 chr11 95332558 95334084 + 2.61678992029931 NA Intergenic ID_B1|SINE|B4 -3697 NM_172543 215512 Mm.262113 NM_172543 ENSMUSG00000038893 Fam117a 5730593F17Rik|AW548096 family with sequence similarity 117, member A protein-coding common_peak1_53_268_0.377357515469328_8.26014112029129_2.61678992029931 chr5 107945977 107947122 + 2.61678992029931 NA intron (NM_026062, intron 1 of 4) intron (NM_026062, intron 1 of 4) 40528 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak2_52_261_0.382318763905662_8.22458238349028_2.61641529990344 chr2 132846438 132847408 + 2.61641529990344 NA promoter-TSS (NM_025646) promoter-TSS (NM_025646) 257 NM_001024385 66586 Mm.357342 NM_025646 ENSMUSG00000027357 Crls1 0610009I22Rik|4930557M15Rik|5730490M08Rik cardiolipin synthase 1 protein-coding common_peak1_65_550_-0.301976249723921_8.9549203837092_2.61580489774216 chr10 60003198 60003882 + 2.61580489774216 NA promoter-TSS (NM_025514) promoter-TSS (NM_025514) 213 NM_001199187 69090 Mm.155839 NM_026937 ENSMUSG00000044475 Ascc1 1810015P09Rik|AI550520|ASC1p50|CGI-18 activating signal cointegrator 1 complex subunit 1 protein-coding common_peak1_96_846_-0.240879795968789_9.6057782613478_2.61559231930357 chr12 76366117 76367985 + 2.61559231930357 NA intron (NM_028356, intron 1 of 2) B1_Mur2|SINE|Alu 2413 NM_001172104 109929 Mm.41880 NM_028356 ENSMUSG00000056459 Zbtb25 2810462M08Rik|2900064P18Rik|AI842128|Kup|Zfp-50|Zfp50 zinc finger and BTB domain containing 25 protein-coding common_peak1_121_813_0.222246777967081_9.78000837324979_2.61512435994124 chr14 99045403 99046332 + 2.61512435994124 NA promoter-TSS (NM_175265) promoter-TSS (NM_175265) 269 NM_175245 76789 Mm.38912 NM_175245 ENSMUSG00000033186 Mzt1 2410129H14Rik|AI120158|Mozart1 mitotic spindle organizing protein 1 protein-coding unique_peak2_16_133_-0.6625529294836_6.73481272571597_2.61493037894531 chr11 116265161 116266073 + 2.61493037894531 NA intron (NM_146032, intron 3 of 15) intron (NM_146032, intron 3 of 15) 8600 NM_146032 217337 Mm.29655 NM_146032 ENSMUSG00000020780 Srp68 2610024I03Rik signal recognition particle 68 protein-coding unique_peak2_16_133_-0.6625529294836_6.73481272571597_2.61493037894531-2 chrX 53643014 53643817 + 2.61493037894531 NA exon (NM_024170, exon 1 of 1) exon (NM_024170, exon 1 of 1) 348 NM_024170 66158 Mm.391252 NM_024170 ENSMUSG00000067925 Cxx1a 1110012O05Rik|Mar8.2A/B|Mart8b CAAX box 1A protein-coding common_peak1_38_310_-0.407827320522743_8.07685710986923_2.61418192365805 chr9 37255201 37255968 + 2.61418192365805 NA 5' UTR (NM_020258, exon 1 of 18) 5' UTR (NM_020258, exon 1 of 18) 154 NM_020258 56857 Mm.440037 NM_020258 ENSMUSG00000032122 Slc37a2 G3PP|Slc37a1|cI-2|ci2 solute carrier family 37 (glycerol-3-phosphate transporter), member 2 protein-coding common_peak1_68_377_0.320352896025723_8.72241887223393_2.61417968014125 chr8 125568942 125569872 + 2.61417968014125 NA Intergenic CpG -15231 NR_015535 75930 Mm.195663 NR_015535 ENSMUSG00000110629 4930567H12Rik 4930579P07Rik RIKEN cDNA 4930567H12 gene ncRNA common_peak2_46_221_0.408715221075911_7.99877347688806_2.61344891660471 chrX 93831374 93832538 + 2.61344891660471 NA 5' UTR (NM_145630, exon 1 of 12) 5' UTR (NM_145630, exon 1 of 12) 139 NM_145630 236900 Mm.12775 NM_145630 ENSMUSG00000035232 Pdk3 2610001M10Rik|AI035637 pyruvate dehydrogenase kinase, isoenzyme 3 protein-coding common_peak1_31_252_-0.460128000382786_7.75292957450292_2.6134144947601-2 chr6 91440669 91441515 + 2.6134144947601 NA promoter-TSS (NR_045980) promoter-TSS (NR_045980) 105 NR_038153 69798 Mm.229265 NR_038153 ENSMUSG00000100680 1810044D09Rik - RIKEN cDNA 1810044D09 gene ncRNA common_peak1_31_252_-0.460128000382786_7.75292957450292_2.6134144947601 chr4 134703738 134704333 + 2.6134144947601 NA 5' UTR (NM_207237, exon 1 of 12) 5' UTR (NM_207237, exon 1 of 12) 255 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding unique_peak2_31_252_-0.460128000382786_7.75292957450292_2.6134144947601 chr10 93352937 93354368 + 2.6134144947601 NA Intergenic Intergenic 17420 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak2_82_485_0.284693365562568_9.06715918638706_2.61321647591177 chr2 151038534 151040047 + 2.61321647591177 NA promoter-TSS (NM_026086) promoter-TSS (NM_026086) 89 NM_026086 67311 Mm.480682 NM_026086 ENSMUSG00000053916 Nanp 1600031M04Rik|Hdhd4 N-acetylneuraminic acid phosphatase protein-coding common_peak2_112_1005_-0.218895091633126_9.86496704398896_2.61307318166185 chr1 88064460 88068028 + 2.61307318166185 NA intron (NM_201641, intron 1 of 4) L1M3b|LINE|L1 -4535 NM_201644 394434 Mm.300095 NM_201644 ENSMUSG00000090175 Ugt1a9 UDPGT|UDPGT 1-9|UGT1-09|UGT1.9|UGTP4|Ugt1a12|mUGTBr/P UDP glucuronosyltransferase 1 family, polypeptide A9 protein-coding common_peak2_134_929_0.209226247722521_9.96570002985666_2.61281341767391 chr2 27474759 27476674 + 2.61281341767391 NA promoter-TSS (NM_001113574) promoter-TSS (NM_001113574) -43 NM_001113574 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding common_peak1_236_2363_-0.14078071291093_11.1366239637221_2.61270095307058 chr17 47504261 47507081 + 2.61270095307058 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 620 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_49_241_0.393764266048146_8.11574537029867_2.61152837891186 chr6 8734712 8735681 + 2.61152837891186 NA intron (NM_001252266, intron 5 of 11) intron (NM_001252266, intron 5 of 11) 23262 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak2_64_541_-0.305234521020974_8.92953178084338_2.6105163766659 chr7 126758881 126760737 + 2.6105163766659 NA exon (NM_011952, exon 1 of 9) exon (NM_011952, exon 1 of 9) 183 NM_011952 26417 Mm.8385 NM_011952 ENSMUSG00000063065 Mapk3 Erk-1|Erk1|Ert2|Esrk1|Mnk1|Mtap2k|Prkm3|p44|p44erk1|p44mapk mitogen-activated protein kinase 3 protein-coding common_peak1_50_248_0.387668845059376_8.15383635459777_2.60977573740222 chr13 43300621 43301694 + 2.60977573740222 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) 3015 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak2_101_640_0.250102541695071_9.44923181746628_2.60924031687206 chr6 47739137 47741080 + 2.60924031687206 NA Intergenic CpG 4123 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_51_255_0.382033555827288_8.19101677791364_2.6088547378671 chr3 153719424 153721216 + 2.6088547378671 NA intron (NM_011372, intron 1 of 4) intron (NM_011372, intron 1 of 4) 4813 NM_011372 20447 Mm.296453 NM_011372 ENSMUSG00000052544 St6galnac3 Siat7c ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding common_peak2_109_708_0.238261512332755_9.58877257340589_2.60791266066144 chr6 67347389 67349714 + 2.60791266066144 NA intron (NM_008354, intron 7 of 15) intron (NM_008354, intron 7 of 15) -8857 NM_001311141 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak1_179_1355_0.174261796801_10.4922723615368_2.607518183601 chr11 120597492 120599372 + 2.607518183601 NA promoter-TSS (NM_001038230) promoter-TSS (NM_001038230) 11 NM_025389 66156 Mm.21645 NM_025389 ENSMUSG00000025135 Anapc11 1110011I19Rik|R75218 anaphase promoting complex subunit 11 protein-coding common_peak1_81_477_0.287188768271035_9.04446119211627_2.60664244546722 chr15 38661763 38662812 + 2.60664244546722 NA intron (NM_025494, intron 1 of 12) intron (NM_025494, intron 1 of 12) 383 NM_025494 66335 Mm.276618 NM_025494 ENSMUSG00000022295 Atp6v1c1 1700025B18Rik|U13839 ATPase, H+ transporting, lysosomal V1 subunit C1 protein-coding unique_peak1_11_26_1.03227565474227_5.2710253295346_2.6064280847005 chr17 79300268 79300673 + 2.6064280847005 NA Intergenic Intergenic 54621 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding unique_peak2_26_98_0.592850946759985_6.9257820934596_2.60420088082323-3 chr16 10981281 10982138 + 2.60420088082323 NA intron (NM_019980, intron 1 of 3) MER2|DNA|TcMar-Tigger 11412 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding unique_peak2_26_98_0.592850946759985_6.9257820934596_2.60420088082323-2 chr14 40958806 40959772 + 2.60420088082323 NA intron (NM_145928, intron 1 of 8) intron (NM_145928, intron 1 of 8) 7607 NM_145928 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding unique_peak2_26_98_0.592850946759985_6.9257820934596_2.60420088082323 chr10 81357376 81358124 + 2.60420088082323 NA exon (NM_028657, exon 1 of 10) exon (NM_028657, exon 1 of 10) 180 NM_028657 73822 Mm.182281 NM_028657 ENSMUSG00000034854 Mfsd12 C19orf28|F630110N24Rik|Wdt1 major facilitator superfamily domain containing 12 protein-coding unique_peak2_21_171_-0.566467012008147_7.14303124869802_2.60399601595159 chr1 86186470 86187780 + 2.60399601595159 NA intron (NM_001310702, intron 10 of 24) MIR|SINE|MIR 32345 NM_001310702 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding common_peak1_21_171_-0.566467012008147_7.14303124869802_2.60399601595159-3 chr7 45567729 45568286 + 2.60399601595159 NA TTS (NM_025330) TTS (NM_025330) -2146 NM_009737 12036 Mm.24210 NM_009737 ENSMUSG00000030826 Bcat2 Bcat-2|Eca40 branched chain aminotransferase 2, mitochondrial protein-coding common_peak1_21_171_-0.566467012008147_7.14303124869802_2.60399601595159-2 chr5 140611998 140612507 + 2.60399601595159 NA intron (NM_008494, intron 2 of 7) intron (NM_008494, intron 2 of 7) 4911 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding unique_peak2_21_171_-0.566467012008147_7.14303124869802_2.60399601595159-2 chr1 136017829 136018851 + 2.60399601595159 NA intron (NM_001160146, intron 1 of 5) intron (NM_001160146, intron 1 of 5) 184 NM_001160146 66241 Mm.41773 NM_025439 ENSMUSG00000026411 Tmem9 1500015G18Rik|AW545782 transmembrane protein 9 protein-coding common_peak1_21_171_-0.566467012008147_7.14303124869802_2.60399601595159 chr13 54187633 54188089 + 2.60399601595159 NA Intergenic Intergenic -4268 NM_001010973 15466 Mm.57243 NM_008286 ENSMUSG00000034987 Hrh2 - histamine receptor H2 protein-coding unique_peak2_9_80_-0.875328086440205_5.90218595966452_2.60357722262819-3 chr9 58274449 58275134 + 2.60357722262819 NA Intergenic Intergenic 21627 NM_026942 69106 Mm.216502 NM_026942 ENSMUSG00000032333 Stoml1 1810015E19Rik|AI847431|SLP1|STORP|UNC24|WPB72 stomatin-like 1 protein-coding unique_peak2_9_80_-0.875328086440205_5.90218595966452_2.60357722262819 chr12 24708791 24709632 + 2.60357722262819 NA intron (NM_009104, intron 3 of 9) intron (NM_009104, intron 3 of 9) 957 NM_009104 20135 Mm.99 NM_009104 ENSMUSG00000020649 Rrm2 AA407299|R2 ribonucleotide reductase M2 protein-coding unique_peak2_9_80_-0.875328086440205_5.90218595966452_2.60357722262819-2 chr13 45396912 45397637 + 2.60357722262819 NA intron (NM_153789, intron 2 of 6) L1ME2z|LINE|L1 7532 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak1_39_319_-0.404181556070229_8.11983731685225_2.60323886095602 chr6 65593552 65594310 + 2.60323886095602 NA intron (NM_001001495, intron 2 of 7) intron (NM_001001495, intron 2 of 7) 3533 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak2_287_2488_0.129784091637056_11.3462425607996_2.60308803212754 chr17 29006414 29008953 + 2.60308803212754 NA intron (NM_134115, intron 1 of 13) CpG 254 NM_134115 106504 Mm.439986 NM_134115 ENSMUSG00000024006 Stk38 5830476G13Rik|9530097A09Rik|AA617404|Ndr1 serine/threonine kinase 38 protein-coding unique_peak2_10_88_-0.842547999458802_6.054459431237_2.60283083993853 chr19 6992139 6992581 + 2.60283083993853 NA promoter-TSS (NM_020566) promoter-TSS (NM_020566) -88 NM_020566 57431 Mm.10721 NM_020566 ENSMUSG00000024963 Dnajc4 2010301J22Rik|Hspf2|Mcg18 DnaJ heat shock protein family (Hsp40) member C4 protein-coding unique_peak2_10_88_-0.842547999458802_6.054459431237_2.60283083993853-2 chr9 88529596 88530328 + 2.60283083993853 NA Intergenic Intergenic -7065 NR_040721 72655 Mm.21798 NR_040721 ENSMUSG00000097195 Snhg5 2810026P18Rik|4933428I09Rik|mU50HG-b small nucleolar RNA host gene 5 ncRNA common_peak2_78_671_-0.270218331665443_9.25720825694604_2.60242497947102 chr15 98933209 98935128 + 2.60242497947102 NA intron (NM_011654, intron 1 of 3) CpG 222 NM_011654 22143 Mm.392113 NM_011654 ENSMUSG00000023004 Tuba1b Tuba2 tubulin, alpha 1B protein-coding common_peak2_32_260_-0.450586048909005_7.80261297211538_2.60238126988792 chr3 96273219 96274465 + 2.60238126988792 NA Intergenic Intergenic 4142 NM_175666 319189 Mm.297655 NM_175666 ENSMUSG00000105827 Hist2h2bb H2b-616 histone cluster 2, H2bb protein-coding common_peak1_32_260_-0.450586048909005_7.80261297211538_2.60238126988792 chrX 85573976 85574442 + 2.60238126988792 NA intron (NM_025729, intron 1 of 8) CpG 187 NM_025729 66724 Mm.119646 NM_025729 ENSMUSG00000035476 Tab3 4921526G09Rik|Map3k7ip3|mKIAA4135 TGF-beta activated kinase 1/MAP3K7 binding protein 3 protein-coding common_peak1_40_327_-0.396108739552658_8.15949763484175_2.60170959309896-2 chr6 30227155 30228155 + 2.60170959309896 NA intron (NM_001169576, intron 3 of 4) intron (NM_001169576, intron 3 of 4) 16148 NM_001169577 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak2_40_327_-0.396108739552658_8.15949763484175_2.60170959309896 chr3 148761942 148763666 + 2.60170959309896 NA Intergenic Intergenic 191831 NM_001081298 99633 Mm.9776 NM_001081298 ENSMUSG00000028184 Adgrl2 AI450192|CIRL-2|Gm619|Lec1|Lphh1|Lphn2|mKIAA0786 adhesion G protein-coupled receptor L2 protein-coding common_peak1_40_327_-0.396108739552658_8.15949763484175_2.60170959309896 chr17 87024751 87025487 + 2.60170959309896 NA promoter-TSS (NM_019936) promoter-TSS (NM_019936) 282 NM_008838 18701 Mm.219685 NM_008838 ENSMUSG00000024145 Pigf - phosphatidylinositol glycan anchor biosynthesis, class F protein-coding common_peak2_229_1863_0.148992557503904_10.9386824234062_2.60150383998678 chr3 103278563 103281020 + 2.60150383998678 NA 5' UTR (NM_001079830, exon 1 of 19) 5' UTR (NM_001079830, exon 1 of 19) 498 NM_001079830 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding common_peak1_61_513_-0.312330033273216_8.84945953255727_2.60127195063967 chr7 12909567 12910756 + 2.60127195063967 NA Intergenic Intergenic -12150 NM_009095 20103 Mm.5291 NM_009095 ENSMUSG00000012848 Rps5 AA617411 ribosomal protein S5 protein-coding common_peak1_74_423_0.302229253726468_8.87903508142643_2.60074953492177 chr16 11460255 11461672 + 2.60074953492177 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 55315 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak1_154_1115_0.19066647978344_10.2194545517209_2.60063628896497 chr1 86300218 86302372 + 2.60063628896497 NA Intergenic Intergenic -1926 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak2_84_729_-0.260110805914888_9.38169725080994_2.60056907102673 chr19 42146874 42148864 + 2.60056907102673 NA exon (NM_183195, exon 1 of 2) exon (NM_183195, exon 1 of 2) 480 NM_183195 277010 Mm.206250 NM_183195 ENSMUSG00000044345 Marveld1 AI504298|Mrvldc1 MARVEL (membrane-associating) domain containing 1 protein-coding unique_peak2_30_121_0.53594486717142_7.1987097711486_2.5998199631365 chr1 171688711 171689877 + 2.5998199631365 NA intron (NM_007649, intron 1 of 3) intron (NM_007649, intron 1 of 3) 7239 NM_007649 12506 Mm.1738 NM_007649 ENSMUSG00000015355 Cd48 AI449234|AW610730|BCM1|BLAST|BLAST-1|BLAST1|Bcm-1|MEM-102|SLAMF2|Sgp-60 CD48 antigen protein-coding common_peak2_30_121_0.53594486717142_7.1987097711486_2.5998199631365 chr17 5006398 5007304 + 2.5998199631365 NA intron (NM_001085355, intron 1 of 19) intron (NM_001085355, intron 1 of 19) 11777 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_30_121_0.53594486717142_7.1987097711486_2.5998199631365 chr19 53547307 53547896 + 2.5998199631365 NA Intergenic Intergenic 18283 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak2_136_948_0.206073279513749_9.99330091677798_2.59980240144399 chr14 25639365 25641958 + 2.59980240144399 NA intron (NM_001310666, intron 7 of 23) intron (NM_001310666, intron 7 of 23) 37148 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak1_136_948_0.206073279513749_9.99330091677798_2.59980240144399 chr4 133049991 133052117 + 2.59980240144399 NA intron (NM_146155, intron 2 of 6) intron (NM_146155, intron 2 of 6) 39548 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak2_91_558_0.264980953623033_9.25919494965471_2.59867209124121 chr8 84248962 84250356 + 2.59867209124121 NA TTS (NM_026423) TTS (NM_026423) 102 NM_001007571 101966 Mm.200723 NM_001007571 ENSMUSG00000019362 D8Ertd738e AA589584 DNA segment, Chr 8, ERATO Doi 738, expressed protein-coding common_peak1_161_1519_-0.176901214151712_10.4814050012551_2.59795745708036 chr1 92906378 92907907 + 2.59795745708036 NA exon (NM_175118, exon 1 of 2) exon (NM_175118, exon 1 of 2) 153 NM_175118 67446 Mm.46179 NM_175118 ENSMUSG00000047067 Dusp28 0710001B24Rik|AV005521 dual specificity phosphatase 28 protein-coding unique_peak2_36_157_0.476002903034307_7.54178219969426_2.59788454253595 chr11 121655270 121656426 + 2.59788454253595 NA intron (NM_178664, intron 3 of 12) MTD|LTR|ERVL-MaLR 17303 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak1_36_157_0.476002903034307_7.54178219969426_2.59788454253595 chr17 73246349 73247034 + 2.59788454253595 NA Intergenic RSINE1|SINE|B4 138706 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding common_peak2_145_1031_0.197704082148732_10.1100792964976_2.59775673639772 chr5 148678178 148680672 + 2.59775673639772 NA Intergenic RMER1C|Other|Other -62415 NR_028285 70138 Mm.417834 NR_028285 ENSMUSG00000086494 2210417A02Rik AV081004 RIKEN cDNA 2210417A02 gene ncRNA common_peak1_60_504_-0.315620126592185_8.82232951434306_2.59721903857748 chr2 167697918 167698741 + 2.59721903857748 NA TTS (NR_110334) TTS (NR_110334) 7152 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_60_504_-0.315620126592185_8.82232951434306_2.59721903857748-2 chr6 142386199 142387029 + 2.59721903857748 NA promoter-TSS (NM_025872) promoter-TSS (NM_025872) 473 NM_001204906 19691 Mm.27407 NM_023042 ENSMUSG00000030243 Recql RecQ1 RecQ protein-like protein-coding common_peak2_24_195_-0.528694651978824_7.3503625181258_2.59693337471953 chr7 45778565 45779312 + 2.59693337471953 NA Intergenic Intergenic -5009 NM_001005511 381983 Mm.44928 NM_001005511 ENSMUSG00000062044 Lmtk3 BC059845|aatyk3 lemur tyrosine kinase 3 protein-coding common_peak1_24_195_-0.528694651978824_7.3503625181258_2.59693337471953 chr19 40588578 40589145 + 2.59693337471953 NA promoter-TSS (NM_019698) promoter-TSS (NM_019698) -398 NM_153554 56454 Mm.233117 NM_019698 ENSMUSG00000025007 Aldh18a1 2810433K04Rik|AI429789|Pycs aldehyde dehydrogenase 18 family, member A1 protein-coding common_peak1_24_195_-0.528694651978824_7.3503625181258_2.59693337471953-2 chr2 3719003 3719693 + 2.59693337471953 NA intron (NM_025626, intron 1 of 3) L1_Mus3|LINE|L1 5890 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_162_1191_0.184675923459208_10.3115064821918_2.59656722957125 chr2 73891746 73893893 + 2.59656722957125 NA promoter-TSS (NM_001284373) promoter-TSS (NM_001284373) -180 NM_001284370 11909 Mm.209903 NM_009715 ENSMUSG00000027104 Atf2 Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|Tg(Gzma-Klra1)7Wum|mXBP activating transcription factor 2 protein-coding common_peak1_698_7673_0.0744830274243391_12.943004563315_2.59576404116999 chr8 88287637 88293108 + 2.59576404116999 NA intron (NM_001037723, intron 1 of 27) intron (NM_001037723, intron 1 of 27) 1306 NM_001037723 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding common_peak2_121_1097_-0.20953057677187_9.99589705061926_2.59530266354885 chr11 101442180 101443762 + 2.59530266354885 NA intron (NM_011289, intron 2 of 4) intron (NM_011289, intron 2 of 4) 726 NM_011289 19942 Mm.340658 NM_011289 ENSMUSG00000063316 Rpl27 - ribosomal protein L27 protein-coding common_peak2_159_1162_0.187335779716626_10.2773032713315_2.59501726892039 chr10 99106601 99108830 + 2.59501726892039 NA promoter-TSS (NM_015737) promoter-TSS (NM_015737) -420 NM_015737 14426 Mm.314 NM_015737 ENSMUSG00000090035 Galnt4 AV011803 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 protein-coding common_peak2_77_662_-0.27330929931837_9.2362104104534_2.59400351069074 chr6 113530696 113532260 + 2.59400351069074 NA promoter-TSS (NM_001033244) promoter-TSS (NM_001033244) 160 NM_175101 66087 Mm.275989 NM_175101 ENSMUSG00000030286 Emc3 0610039A15Rik|AI225901|AW260416|Pob|Tmem111 ER membrane protein complex subunit 3 protein-coding common_peak2_69_586_-0.289158667400162_9.05263735940997_2.59362210022098 chr15 78462136 78463922 + 2.59362210022098 NA intron (NM_027902, intron 2 of 17) intron (NM_027902, intron 2 of 17) 5605 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak1_69_586_-0.289158667400162_9.05263735940997_2.59362210022098 chr9 21525273 21526648 + 2.59362210022098 NA promoter-TSS (NM_001198794) promoter-TSS (NM_001198794) -217 NM_206536 382062 Mm.325205 NM_206536 ENSMUSG00000057191 AB124611 Gm1706 cDNA sequence AB124611 protein-coding common_peak2_69_586_-0.289158667400162_9.05263735940997_2.59362210022098-2 chr7 141087937 141089530 + 2.59362210022098 NA intron (NM_001162924, intron 9 of 13) intron (NM_001162924, intron 9 of 13) 8964 NM_019762 56460 Mm.350037 NM_019762 ENSMUSG00000054065 Pkp3 2310056L12Rik plakophilin 3 protein-coding common_peak2_23_82_0.63873603674517_6.69440744971951_2.59356953701873 chr7 19010102 19010841 + 2.59356953701873 NA Intergenic URR1B|DNA|hAT-Charlie 6406 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding common_peak1_23_82_0.63873603674517_6.69440744971951_2.59356953701873 chr2 32236657 32237019 + 2.59356953701873 NA intron (NM_145145, intron 1 of 19) CpG 155 NM_145145 99011 Mm.31192 NM_145145 ENSMUSG00000039254 Pomt1 AI505244 protein-O-mannosyltransferase 1 protein-coding common_peak1_42_344_-0.384725381411581_8.23808986095974_2.59343209978352-2 chr9 48985271 48986013 + 2.59343209978352 NA intron (NM_175482, intron 1 of 23) CpG 257 NM_175482 235323 Mm.21630 NM_175482 ENSMUSG00000032267 Usp28 9830148O20Rik|AU022237|mKIAA1515 ubiquitin specific peptidase 28 protein-coding common_peak1_42_344_-0.384725381411581_8.23808986095974_2.59343209978352 chr1 95664098 95664909 + 2.59343209978352 NA intron (NM_001159745, intron 1 of 3) intron (NM_001159745, intron 1 of 3) 3091 NM_009183 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak2_42_344_-0.384725381411581_8.23808986095974_2.59343209978352 chr3 115757887 115759425 + 2.59343209978352 NA Intergenic LTR16A|LTR|ERVL -43601 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding common_peak1_129_885_0.212363942964235_9.89734486003714_2.59318010574134 chr11 58183704 58185743 + 2.59318010574134 NA intron (NM_001135115, intron 1 of 1) intron (NM_001135115, intron 1 of 1) 880 NM_001135115 631323 Mm.394103 NM_001135115 Gm12250 Irgb10|OTTMUSG00000005723 predicted gene 12250 protein-coding common_peak1_124_1127_-0.20543057338409_10.0368360657067_2.59315337318008 chr1 21350356 21352137 + 2.59315337318008 NA 3' UTR (NM_183322, exon 3 of 3) 3' UTR (NM_183322, exon 3 of 3) 1569 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_19_155_-0.594267991231472_6.98826822324651_2.59253209948571 chr17 24549262 24549630 + 2.59253209948571 NA promoter-TSS (NM_013630) promoter-TSS (NM_013630) -504 NM_013630 18763 Mm.30435 NM_013630 ENSMUSG00000032855 Pkd1 PC1|mFLJ00285 polycystic kidney disease 1 homolog protein-coding common_peak2_19_155_-0.594267991231472_6.98826822324651_2.59253209948571 chr8 81636199 81637480 + 2.59253209948571 NA intron (NM_001297591, intron 2 of 24) intron (NM_001297591, intron 2 of 24) 294277 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding unique_peak2_19_155_-0.594267991231472_6.98826822324651_2.59253209948571-2 chr9 123813664 123814655 + 2.59253209948571 NA intron (NM_001110253, intron 14 of 17) intron (NM_001110253, intron 14 of 17) 7682 NM_030712 80901 Mm.124289 NM_030712 ENSMUSG00000048521 Cxcr6 BB217514|BONZO|STRL33 chemokine (C-X-C motif) receptor 6 protein-coding common_peak1_19_155_-0.594267991231472_6.98826822324651_2.59253209948571-2 chr9 111139529 111140119 + 2.59253209948571 NA intron (NM_001164838, intron 2 of 14) intron (NM_001164838, intron 2 of 14) 21713 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding unique_peak2_19_155_-0.594267991231472_6.98826822324651_2.59253209948571 chr8 14994080 14995523 + 2.59253209948571 NA intron (NM_172751, intron 27 of 28) intron (NM_172751, intron 27 of 28) -16224 NM_029116 74901 Mm.46675 NM_029116 ENSMUSG00000055675 Kbtbd11 2900016B01Rik|4930465M17Rik|mKIAA0711 kelch repeat and BTB (POZ) domain containing 11 protein-coding common_peak2_57_476_-0.322569830306586_8.73656054085222_2.59249711888055 chr7 27552175 27553982 + 2.59249711888055 NA promoter-TSS (NM_011116) promoter-TSS (NM_011116) 34 NM_011116 18807 Mm.6483 NM_011116 ENSMUSG00000003363 Pld3 Sam-9 phospholipase D family, member 3 protein-coding unique_peak2_13_110_-0.734463427518536_6.42718415259084_2.59227823050903 chr18 88974709 88975610 + 2.59227823050903 NA intron (NM_175542, intron 4 of 48) intron (NM_175542, intron 4 of 48) 3129 NR_105777 102466633 NR_105777 ENSMUSG00000098676 Mir6359 Gm27328|mmu-mir-6359 microRNA 6359 ncRNA unique_peak2_13_110_-0.734463427518536_6.42718415259084_2.59227823050903-2 chr9 70421579 70422180 + 2.59227823050903 NA promoter-TSS (NM_007630) promoter-TSS (NM_007630) -325 NM_007630 12442 Mm.22592 NM_007630 ENSMUSG00000032218 Ccnb2 CycB2 cyclin B2 protein-coding common_peak2_37_163_0.469424509965163_7.59226425960066_2.59198066496597 chr6 52961958 52963204 + 2.59198066496597 NA intron (NM_173406, intron 1 of 4) intron (NM_173406, intron 1 of 4) -52961 NM_001168277 231986 Mm.386865 NM_173406 ENSMUSG00000063568 Jazf1 AI591476|C820002C15|Jaz1|Tip27 JAZF zinc finger 1 protein-coding common_peak1_64_348_0.329831294123244_8.61199887327128_2.59102349633499 chr7 16174715 16175855 + 2.59102349633499 NA promoter-TSS (NM_001277989) promoter-TSS (NM_001277989) -110 NM_001277988 17537 Mm.360516 NM_008627 ENSMUSG00000041420 Meis3 AI573393|Mrg2 Meis homeobox 3 protein-coding common_peak2_63_340_0.335849956473707_8.58155290726103_2.59053596770742 chr11 26640053 26641292 + 2.59053596770742 NA Intergenic Intergenic -46752 NM_001252447 69922 Mm.285351 NM_027260 ENSMUSG00000064090 Vrk2 2810003O05Rik|AI447698 vaccinia related kinase 2 protein-coding common_peak1_90_550_0.266436534148889_9.2391267756456_2.59021183911836 chr16 56716891 56718165 + 2.59021183911836 NA promoter-TSS (NM_001252443) promoter-TSS (NM_001252443) -78 NM_019678 21787 Mm.425970 NM_019678 ENSMUSG00000022757 Tfg AI173908 Trk-fused gene protein-coding common_peak1_58_486_-0.322251557040516_8.76665218356208_2.59013279588173 chr11 67494396 67495295 + 2.59013279588173 NA Intergenic Intergenic -38153 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_56_467_-0.325866000033232_8.70743171956679_2.59000355044264 chr1 130461786 130463242 + 2.59000355044264 NA intron (NM_010016, intron 1 of 9) intron (NM_010016, intron 1 of 9) 226 NM_010016 13136 Mm.101591 NM_010016 ENSMUSG00000026399 Cd55 Daf|Daf-GPI|Daf1|GPI-DAF CD55 molecule, decay accelerating factor for complement protein-coding common_peak1_56_467_-0.325866000033232_8.70743171956679_2.59000355044264 chr10 120665311 120666361 + 2.59000355044264 NA Intergenic Intergenic -99896 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA common_peak1_127_1158_-0.202574654322236_10.0773775238454_2.58980423842027 chr17 8310522 8311834 + 2.58980423842027 NA promoter-TSS (NM_134114) promoter-TSS (NM_134114) -60 NR_073374 75060 Mm.426530 NR_073374 ENSMUSG00000087478 4930506C21Rik - RIKEN cDNA 4930506C21 gene ncRNA common_peak2_99_624_0.251527434959646_9.41347609702927_2.58973085051176 chr11 30985654 30987460 + 2.58973085051176 NA promoter-TSS (NM_001290667) promoter-TSS (NM_001290667) -192 NM_001290667 68044 Mm.32656 NM_026527 ENSMUSG00000020309 Chac2 - ChaC, cation transport regulator 2 protein-coding common_peak2_138_966_0.20461270131576_10.0196784301347_2.58969096477596 chr7 105639655 105641593 + 2.58969096477596 NA promoter-TSS (NM_019502) promoter-TSS (NM_019502) 84 NM_019502 14356 Mm.220330 NM_019502 ENSMUSG00000089847 Timm10b Fxc1|Tim10b|Tim9b translocase of inner mitochondrial membrane 10B protein-coding common_peak1_76_652_-0.274217640773365_9.21383036115975_2.58955110691735 chr13 64311740 64312813 + 2.58955110691735 NA exon (NM_025370, exon 2 of 6) exon (NM_025370, exon 2 of 6) 434 NM_025370 66129 Mm.491110 NM_025370 ENSMUSG00000021482 Aaed1 1110018J18Rik|AI849003 AhpC/TSA antioxidant enzyme domain containing 1 protein-coding common_peak2_44_361_-0.373667249518574_8.31301226232392_2.58871647220038 chr7 127386280 127387663 + 2.58871647220038 NA 5' UTR (NM_030226, exon 1 of 3) 5' UTR (NM_030226, exon 1 of 3) 195 NM_030226 78921 Mm.200950 NM_030226 ENSMUSG00000030823 9130019O22Rik - RIKEN cDNA 9130019O22 gene protein-coding common_peak2_141_994_0.201219141602362_10.0591622862322_2.58813432903963 chr4 32799538 32800938 + 2.58813432903963 NA promoter-TSS (NM_175364) promoter-TSS (NM_175364) -21 NM_175364 108755 Mm.1182 NM_175364 ENSMUSG00000045854 Lyrm2 2610208E05Rik LYR motif containing 2 protein-coding common_peak2_55_458_-0.329173282209526_8.67776370230904_2.58793649980792 chr12 33169124 33171202 + 2.58793649980792 NA intron (NM_028139, intron 2 of 3) intron (NM_028139, intron 2 of 3) 22477 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak2_38_169_0.463552513470159_7.64116719287278_2.58754836706572 chr9 32518136 32519242 + 2.58754836706572 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 22763 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_72_408_0.306361993443879_8.82913802966369_2.58713119343017 chr11 59662003 59663091 + 2.58713119343017 NA promoter-TSS (NM_012027) promoter-TSS (NM_012027) 52 NM_012027 26936 Mm.2402 NM_012027 ENSMUSG00000005417 Mprip 9530046C02|AA536749|AI647711|C76423|RIP3|Rhoip3|mKIAA0864|p116Rip myosin phosphatase Rho interacting protein protein-coding common_peak2_72_408_0.306361993443879_8.82913802966369_2.58713119343017-2 chr5 115064779 115066438 + 2.58713119343017 NA intron (NM_029012, intron 2 of 10) B2_Mm2|SINE|B2 42354 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt Gm13826|OTTMUSG00000014624 ribosomal protein L37, retrotransposed protein-coding common_peak2_72_408_0.306361993443879_8.82913802966369_2.58713119343017 chr18 42261253 42262316 + 2.58713119343017 NA intron (NM_134137, intron 1 of 31) intron (NM_134137, intron 1 of 31) 287 NM_134137 107045 Mm.312170 NM_134137 ENSMUSG00000024493 Lars 2310045K21Rik|3110009L02Rik|AW536573|mKIAA1352 leucyl-tRNA synthetase protein-coding common_peak1_43_353_-0.38119549620269_8.27700780198165_2.58697934480875-2 chr2 155538624 155539270 + 2.58697934480875 NA intron (NM_019811, intron 2 of 17) B1_Mus1|SINE|Alu 17983 NR_040613 74945 Mm.401956 NR_040613 ENSMUSG00000086529 Acss2os 4930471I20Rik acyl-CoA synthetase short-chain family member 2, opposite strand ncRNA common_peak1_43_353_-0.38119549620269_8.27700780198165_2.58697934480875 chr10 39518980 39519855 + 2.58697934480875 NA intron (NM_008054, intron 5 of 13) B4A|SINE|B4 -93517 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak1_223_1801_0.151018387763456_10.8908924896953_2.58664282228605 chr9 103108275 103110203 + 2.58664282228605 NA Intergenic Intergenic -2835 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding common_peak1_34_276_-0.432296451525655_7.89759394028636_2.58512434065547 chr13 67500005 67500598 + 2.58512434065547 NA intron (NM_001007575, intron 1 of 3) intron (NM_001007575, intron 1 of 3) 221 NM_001007575 238693 Mm.478914 NM_001007575 ENSMUSG00000071291 Zfp58 A530094I17Rik|Mfg-1|Mfg1|Rslcan5|Zfp817 zinc finger protein 58 protein-coding common_peak1_62_333_0.337904867477731_8.55265672621292_2.58451230536363 chrX 17571506 17572410 + 2.58451230536363 NA promoter-TSS (NM_001313746) promoter-TSS (NM_001313746) 49 NM_001313746 72018 Mm.41558 NM_028058 ENSMUSG00000025040 Fundc1 1500005J14Rik|1810033P05Rik FUN14 domain containing 1 protein-coding common_peak1_45_370_-0.370202261340937_8.35017424595033_2.5840316135677 chr2 32775243 32775720 + 2.5840316135677 NA promoter-TSS (NM_178595) promoter-TSS (NM_178595) -142 NM_001290566 338348 Mm.475130 NM_177384 ENSMUSG00000039021 Ttc16 1200002K10Rik tetratricopeptide repeat domain 16 protein-coding common_peak1_323_2895_0.119720818282385_11.5597062962244_2.58400238611125 chr15 84895138 84897975 + 2.58400238611125 NA Intergenic HAL1M8|LINE|L1 -26872 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak2_128_876_0.213428653962501_9.88314735942598_2.58370567978359 chr12 81970684 81972934 + 2.58370567978359 NA intron (NM_018814, intron 20 of 35) intron (NM_018814, intron 20 of 35) 111779 NM_018814 54604 Mm.86584 NM_018814 ENSMUSG00000021140 Pcnx 2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnx1|Pcnxl1 pecanex homolog (Drosophila) protein-coding unique_peak1_18_57_0.742383208269318_6.22917259926223_2.58318331625951-3 chr6 108453334 108453799 + 2.58318331625951 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -36177 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA unique_peak1_18_57_0.742383208269318_6.22917259926223_2.58318331625951 chr13 62382697 62383219 + 2.58318331625951 NA intron (NM_001162910, intron 1 of 3) RLTR22_Mur|LTR|ERVK 216 NM_001162910 100041979 Mm.445930 NM_001162910 ENSMUSG00000094942 Gm3604 - predicted gene 3604 protein-coding unique_peak1_18_57_0.742383208269318_6.22917259926223_2.58318331625951-2 chr17 40880324 40880821 + 2.58318331625951 NA promoter-TSS (NM_027834) promoter-TSS (NM_027834) -14 NM_027834 71583 Mm.158733 NM_027834 ENSMUSG00000054951 9130008F23Rik - RIKEN cDNA 9130008F23 gene protein-coding common_peak1_31_127_0.522865574311524_7.26143278715576_2.58242965497693 chr6 122285318 122285956 + 2.58242965497693 NA Intergenic RLTR11B|LTR|ERVK -2804 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak1_96_845_-0.239175489756541_9.60492610824168_2.58126875562364 chr9 108566996 108568410 + 2.58126875562364 NA promoter-TSS (NM_023247) promoter-TSS (NM_023247) -361 NM_023247 66706 Mm.29471 NM_023247 ENSMUSG00000070283 Ndufaf3 4733401H18Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3 protein-coding common_peak2_67_568_-0.295523958959699_9.00452286282673_2.5807355777052 chr5 108668363 108670094 + 2.5807355777052 NA TTS (NM_174870) TTS (NM_174870) 5568 NM_001310691 231583 Mm.440571 NM_174870 ENSMUSG00000046959 Slc26a1 Sat1 solute carrier family 26 (sulfate transporter), member 1 protein-coding common_peak1_249_2075_0.14114236184318_11.0901619092795_2.58069645738503 chr5 92082503 92084352 + 2.58069645738503 NA promoter-TSS (NM_001080797) promoter-TSS (NM_001080797) 171 NM_001080794 23881 Mm.290530 NM_011816 ENSMUSG00000029405 G3bp2 AA409541|E430034L04Rik|G3BP|mKIAA0660 GTPase activating protein (SH3 domain) binding protein 2 protein-coding common_peak1_46_379_-0.366724520904929_8.38649334787848_2.5802320998394 chr12 87443362 87444105 + 2.5802320998394 NA promoter-TSS (NM_026958) promoter-TSS (NM_026958) 106 NM_001102565 211064 Mm.486235 NM_001102565 ENSMUSG00000079036 Alkbh1 2700073G19Rik|Abh|Alkbh|alkB|hABH alkB homolog 1, histone H2A dioxygenase protein-coding common_peak2_527_6080_-0.0863236817817512_12.5269310332972_2.57994243579717 chr8 72131095 72138125 + 2.57994243579717 NA promoter-TSS (NM_001001491) promoter-TSS (NM_001001491) -682 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak1_49_405_-0.352708413862436_8.48898171025396_2.57983647376687 chr3 126692956 126693899 + 2.57983647376687 NA intron (NM_001293665, intron 3 of 19) intron (NM_001293665, intron 3 of 19) 96476 NM_023813 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak2_106_683_0.241117904469876_9.53841146712083_2.57930726259802 chr9 32494257 32496934 + 2.57930726259802 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 45857 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_50_414_-0.349296749106831_8.52231915168087_2.57883303228787 chr9 87254865 87255721 + 2.57883303228787 NA 5' UTR (NM_199316, exon 1 of 27) 5' UTR (NM_199316, exon 1 of 27) 239 NM_199316 382090 Mm.335338 NM_199316 ENSMUSG00000056919 Cep162 4922501C03Rik|mKIAA1009 centrosomal protein 162 protein-coding common_peak1_35_284_-0.423520435993082_7.94305789105556_2.57860739611464 chr18 9450272 9450930 + 2.57860739611464 NA promoter-TSS (NM_026484) promoter-TSS (NM_026484) -451 NM_026484 67974 Mm.86523 NM_026484 ENSMUSG00000024286 Ccny 1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik cyclin Y protein-coding common_peak1_35_284_-0.423520435993082_7.94305789105556_2.57860739611464-2 chr5 135369427 135369927 + 2.57860739611464 NA promoter-TSS (NM_145414) promoter-TSS (NM_145414) -276 NM_145414 100609 Mm.281189 NM_145414 ENSMUSG00000000916 Nsun5 9830109N13Rik|AI326939|Nol1r|Wbscr20|Wbscr20a NOL1/NOP2/Sun domain family, member 5 protein-coding common_peak2_419_4030_0.101882785198452_12.0278634604503_2.57838203654338 chr2 178286825 178292183 + 2.57838203654338 NA intron (NM_001177789, intron 7 of 12) L1MA7|LINE|L1 96420 NM_001007154 74189 Mm.44413 NM_028806 ENSMUSG00000027525 Phactr3 1500003N10Rik|4930415A02Rik|H17739|Scapin1|Scapinin|mKIAA4224 phosphatase and actin regulator 3 protein-coding common_peak1_221_2188_-0.145525760629894_11.023293358866_2.57825329958275 chr11 120580592 120582527 + 2.57825329958275 NA promoter-TSS (NM_133796) promoter-TSS (NM_133796) 61 NM_133796 192662 Mm.30016 NM_133796 ENSMUSG00000025132 Arhgdia 5330430M07Rik|Gdi-1|Rho-GDI|RhoDGI|RhoGDI-1 Rho GDP dissociation inhibitor (GDI) alpha protein-coding unique_peak1_14_39_0.860116026523985_5.75198610814935_2.5780594337963 chr12 8344716 8345155 + 2.5780594337963 NA Intergenic Intergenic 31502 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak2_8_73_-0.931380314942638_5.74376320815763_2.5780594337963 chr3 90309332 90309955 + 2.5780594337963 NA Intergenic Intergenic -32011 NM_139304 229542 Mm.270999 NM_139304 ENSMUSG00000042390 Gatad2b AL118180|C430014D17Rik|P66beta|mKIAA1150 GATA zinc finger domain containing 2B protein-coding unique_peak1_14_39_0.860116026523985_5.75198610814935_2.5780594337963-2 chr18 62110936 62111377 + 2.5780594337963 NA Intergenic Intergenic 68825 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak1_14_39_0.860116026523985_5.75198610814935_2.5780594337963-2 chr7 137475084 137475388 + 2.5780594337963 NA Intergenic RLTR1B-int|LTR|ERV1 37562 NR_033611 620016 Mm.388932 NR_033611 ENSMUSG00000100863 Gm12669 OTTMUSG00000007920 glutaredoxin 3 pseudogene pseudo common_peak1_14_39_0.860116026523985_5.75198610814935_2.5780594337963-3 chr9 45244375 45244727 + 2.5780594337963 NA intron (NM_001198971, intron 4 of 4) intron (NM_001198971, intron 4 of 4) 22156 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak1_14_39_0.860116026523985_5.75198610814935_2.5780594337963 chr14 65149590 65149929 + 2.5780594337963 NA Intergenic CpG -51653 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak1_14_39_0.860116026523985_5.75198610814935_2.5780594337963-4 chr9 61962211 61962554 + 2.5780594337963 NA intron (NM_028748, intron 6 of 7) intron (NM_028748, intron 6 of 7) -15583 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding common_peak2_146_1041_0.195871190785461_10.1230751576712_2.57717202551146 chr4 135119287 135122130 + 2.57717202551146 NA promoter-TSS (NM_019732) promoter-TSS (NM_019732) 63 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_254_2573_-0.134019974214924_11.2627863511132_2.5765646673889 chr11 69757154 69760228 + 2.5765646673889 NA promoter-TSS (NM_001291068) promoter-TSS (NM_001291068) -58 NM_001291068 20020 Mm.16533 NM_009089 ENSMUSG00000005198 Polr2a 220kDa|Rpb1|Rpo2-1 polymerase (RNA) II (DNA directed) polypeptide A protein-coding common_peak2_201_1576_0.160493560001301_10.7032137247912_2.57638080883307 chr2 30236619 30238726 + 2.57638080883307 NA promoter-TSS (NR_028299) promoter-TSS (NR_028299) -41 NR_028299 67350 Mm.402683 NR_028299 1700084E18Rik - RIKEN cDNA 1700084E18 gene ncRNA common_peak2_231_1885_0.147386287396539_10.9548071043734_2.57601053143676 chr13 3536965 3539547 + 2.57601053143676 NA 5' UTR (NM_008112, exon 1 of 11) 5' UTR (NM_008112, exon 1 of 11) 181 NM_008112 14569 Mm.153226 NM_008112 ENSMUSG00000021218 Gdi2 GDI-B|GDIB|Gdi3 guanosine diphosphate (GDP) dissociation inhibitor 2 protein-coding common_peak1_17_140_-0.634865990526126_6.82211835713573_2.57528333513116-2 chr2 78859636 78860077 + 2.57528333513116 NA Intergenic Intergenic -9191 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_17_140_-0.634865990526126_6.82211835713573_2.57528333513116 chr15 81664064 81664516 + 2.57528333513116 NA intron (NM_001289712, intron 1 of 16) CpG 401 NR_110362 214669 Mm.280768 NM_145993 ENSMUSG00000022394 L3mbtl2 4732493N06Rik|M4mbt l(3)mbt-like 2 (Drosophila) protein-coding common_peak1_17_140_-0.634865990526126_6.82211835713573_2.57528333513116-3 chr2 164080456 164080974 + 2.57528333513116 NA intron (NM_021420, intron 2 of 10) intron (NM_021420, intron 2 of 10) 6537 NM_021420 58231 Mm.234472 NM_021420 ENSMUSG00000018209 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 protein-coding unique_peak2_17_140_-0.634865990526126_6.82211835713573_2.57528333513116 chr4 152204164 152205349 + 2.57528333513116 NA intron (NM_001146058, intron 1 of 8) intron (NM_001146058, intron 1 of 8) 4912 NM_001146058 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak2_122_1106_-0.206861725562842_10.0090086440001_2.57527012146461 chr12 100723944 100725950 + 2.57527012146461 NA promoter-TSS (NM_153587) promoter-TSS (NM_153587) 81 NM_153587 73086 Mm.220417 NM_153587 ENSMUSG00000021180 Rps6ka5 3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK|RLSK|S6K-alpha-5 ribosomal protein S6 kinase, polypeptide 5 protein-coding common_peak1_27_104_0.572319232351803_7.00040513384202_2.57466302625559 chr19 4838784 4839446 + 2.57466302625559 NA promoter-TSS (NM_207268) promoter-TSS (NM_207268) 207 NM_016892 12460 Mm.434411 NM_016892 ENSMUSG00000034108 Ccs Ccsd copper chaperone for superoxide dismutase protein-coding common_peak2_27_104_0.572319232351803_7.00040513384202_2.57466302625559 chr1 40324509 40325382 + 2.57466302625559 NA intron (NM_133193, intron 1 of 10) intron (NM_133193, intron 1 of 10) 318 NM_133193 107527 Mm.155583 NM_133193 ENSMUSG00000070942 Il1rl2 AI481289|AW551444|IL-1Rrp2 interleukin 1 receptor-like 2 protein-coding common_peak2_27_104_0.572319232351803_7.00040513384202_2.57466302625559-2 chr19 4838796 4839455 + 2.57466302625559 NA promoter-TSS (NM_207268) promoter-TSS (NM_207268) 197 NM_016892 12460 Mm.434411 NM_016892 ENSMUSG00000034108 Ccs Ccsd copper chaperone for superoxide dismutase protein-coding common_peak2_135_1241_-0.195076263687241_10.1809113263769_2.57466030745189 chr16 93584782 93587324 + 2.57466030745189 NA intron (NM_145482, intron 10 of 11) intron (NM_145482, intron 10 of 11) 17762 NM_145482 224440 Mm.10628 NM_145482 ENSMUSG00000022948 Setd4 AY037804|C21orf18|ORF21 SET domain containing 4 protein-coding common_peak2_60_319_0.342591356159611_8.49322377296717_2.57351961566149 chr10 21160338 21161794 + 2.57351961566149 NA promoter-TSS (NM_010848) promoter-TSS (NM_010848) -82 NM_010848 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding common_peak1_39_176_0.450140988734135_7.69267604445007_2.57343050379802 chr9 54642720 54643490 + 2.57343050379802 NA intron (NM_053178, intron 1 of 13) intron (NM_053178, intron 1 of 13) 18780 NM_053178 94180 Mm.20592 NM_053178 ENSMUSG00000032281 Acsbg1 BG1|Bgm|E230019G03Rik|GR-LACS|Lpd|R75185 acyl-CoA synthetase bubblegum family member 1 protein-coding unique_peak2_15_125_-0.681026660374749_6.63676659331254_2.57288679418479 chr4 42293561 42294462 + 2.57288679418479 NA intron (NM_001270431, intron 1 of 3).2 intron (NM_001270431, intron 1 of 3).2 147 NM_001270431 100041579 Mm.389537 NM_001270431 ENSMUSG00000078747 Gm20878 - predicted gene, 20878 protein-coding common_peak1_40_182_0.445743426781383_7.73857155167473_2.57188472768659 chr11 76398469 76399171 + 2.57188472768659 NA exon (NM_008750, exon 1 of 8) exon (NM_008750, exon 1 of 8) 321 NM_008750 18230 Mm.27915 NM_008750 ENSMUSG00000020844 Nxn l11Jus13 nucleoredoxin protein-coding common_peak1_25_203_-0.517004097330563_7.41392329330621_2.57182736698676 chr17 34591817 34592206 + 2.57182736698676 NA promoter-TSS (NM_017463) promoter-TSS (NM_017463) -460 NM_017463 18515 Mm.390957 NM_017463 ENSMUSG00000034673 Pbx2 AU043397|G17 pre B cell leukemia homeobox 2 protein-coding unique_peak2_25_203_-0.517004097330563_7.41392329330621_2.57182736698676 chr11 74521963 74523690 + 2.57182736698676 NA intron (NM_001015046, intron 2 of 24) CpG 67332 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_109_709_0.236228115180227_9.58978927198216_2.57049456980876 chr8 4612495 4614107 + 2.57049456980876 NA intron (NM_145591, intron 1 of 3) intron (NM_145591, intron 1 of 3) 131 NM_145591 233987 Mm.102799 NM_145591 ENSMUSG00000058748 Zfp958 - zinc finger protein 958 protein-coding common_peak2_369_3430_0.110088138718432_11.7994574799169_2.57044259309901 chr6 144901363 144904446 + 2.57044259309901 NA Intergenic Intergenic 145908 NM_001024468 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding common_peak1_22_179_-0.553392292236165_7.21515695021159_2.56901316557361 chr10 61306168 61306755 + 2.56901316557361 NA Intergenic Intergenic 8625 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak1_22_179_-0.553392292236165_7.21515695021159_2.56901316557361-2 chr15 78595200 78595530 + 2.56901316557361 NA Intergenic Intergenic -1682 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding unique_peak2_22_179_-0.553392292236165_7.21515695021159_2.56901316557361 chr16 52132599 52133814 + 2.56901316557361 NA intron (NM_001033238, intron 5 of 17) intron (NM_001033238, intron 5 of 17) 101657 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_151_1088_0.191412898239051_10.1844946878364_2.56880172464089 chr2 25532799 25534255 + 2.56880172464089 NA intron (NM_009422, intron 4 of 10) B1_Mur1|SINE|Alu 13413 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding common_peak2_155_1453_-0.179643481939021_10.4159898129501_2.56843566445683 chr2 126875109 126876834 + 2.56843566445683 NA intron (NM_001164325, intron 1 of 38) CpG 290 NM_001164325 58800 Mm.244705 NM_021450 ENSMUSG00000027365 Trpm7 2310022G15Rik|4833414K03Rik|5033407O22Rik|CHAK|CHAK1|LTrpC-7|Ltpr7|Ltrpc7|TRPPLIK transient receptor potential cation channel, subfamily M, member 7 protein-coding common_peak1_213_2096_-0.148528415554463_10.9598469383194_2.56801715056806 chr15 12009407 12010939 + 2.56801715056806 NA Intergenic PB1D9|SINE|Alu -14166 NM_011294 20024 Mm.41746 NM_011294 ENSMUSG00000022205 Sub1 AI842364|P15|P9|Pc4|Rpo2tc1 SUB1 homolog (S. cerevisiae) protein-coding common_peak1_139_976_0.202455584927861_10.0334425444323_2.56785781742448 chr5 38259711 38260961 + 2.56785781742448 NA promoter-TSS (NM_025480) promoter-TSS (NM_025480) -39 NM_025480 66309 Mm.256185 NM_025480 ENSMUSG00000067365 Tmem128 2810021O14Rik transmembrane protein 128 protein-coding common_peak2_32_133_0.511230757203108_7.32170456905933_2.56780667678996 chr1 179667941 179668930 + 2.56780667678996 NA exon (NM_178653, exon 1 of 12) exon (NM_178653, exon 1 of 12) 204 NM_178653 109232 Mm.136458 NM_178653 ENSMUSG00000038936 Sccpdh AW214504|C330023F11Rik saccharopine dehydrogenase (putative) protein-coding common_peak2_76_439_0.295361827248406_8.92904062714886_2.56769516612397 chr16 43658487 43660920 + 2.56769516612397 NA intron (NM_001146325, intron 2 of 3) B1_Mur2|SINE|Alu 4481 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding unique_peak2_6_59_-1.0735504679633_5.37011536162687_2.56700509083571 chr7 24862398 24862827 + 2.56700509083571 NA Intergenic Intergenic 7079 NM_182785 232973 Mm.189648 NM_182785 ENSMUSG00000062732 Lypd4 4933400F01Rik Ly6/Plaur domain containing 4 protein-coding common_peak2_114_1024_-0.214841803420979_9.89398729268232_2.56691694630342-2 chr18 67307366 67309562 + 2.56691694630342 NA intron (NM_053261, intron 3 of 7) intron (NM_053261, intron 3 of 7) 19241 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak2_114_1024_-0.214841803420979_9.89398729268232_2.56691694630342 chr15 73169389 73172140 + 2.56691694630342 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 14183 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_57_297_0.356107105236763_8.39722207308054_2.56671579359752 chr1 185203186 185203985 + 2.56671579359752 NA promoter-TSS (NM_001163754) promoter-TSS (NM_001163754) -583 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding common_peak2_171_1626_-0.169046743045865_10.5834751641496_2.56642361806321 chr2 167655637 167658290 + 2.56642361806321 NA intron (NM_145538, intron 1 of 5) intron (NM_145538, intron 1 of 5) 4581 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding common_peak2_116_770_0.22649091584611_9.70383250783809_2.56628936327071 chr11 26592592 26594582 + 2.56628936327071 NA intron (NM_001252447, intron 1 of 11) CpG 333 NM_027260 69922 Mm.285351 NM_027260 ENSMUSG00000064090 Vrk2 2810003O05Rik|AI447698 vaccinia related kinase 2 protein-coding common_peak1_16_48_0.788826416858964_6.00912305254469_2.56593925009413 chr14 52141098 52141520 + 2.56593925009413 NA intron (NM_023879, intron 14 of 24) intron (NM_023879, intron 14 of 24) 30406 NM_023879 77945 Mm.21662 NM_023879 ENSMUSG00000057132 Rpgrip1 0610005A07Rik|4930401L23Rik|4930505G06Rik|A930002K18Rik|AA415034|nmf247 retinitis pigmentosa GTPase regulator interacting protein 1 protein-coding common_peak1_16_48_0.788826416858964_6.00912305254469_2.56593925009413-4 chr8 33606694 33607018 + 2.56593925009413 NA intron (NM_017374, intron 1 of 6) B2_Mm2|SINE|B2 7235 NM_017374 19053 Mm.29301 NM_017374 ENSMUSG00000009630 Ppp2cb AI115466|D8Ertd766e|PP2Ac protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform protein-coding common_peak1_16_48_0.788826416858964_6.00912305254469_2.56593925009413-2 chr4 63392796 63393235 + 2.56593925009413 NA intron (NM_001305432, intron 2 of 20) intron (NM_001305432, intron 2 of 20) 5225 NM_001305432 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding unique_peak1_16_48_0.788826416858964_6.00912305254469_2.56593925009413 chr18 80500887 80501355 + 2.56593925009413 NA Intergenic Intergenic -31454 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding common_peak1_16_48_0.788826416858964_6.00912305254469_2.56593925009413-3 chr5 134234639 134235099 + 2.56593925009413 NA Intergenic Intergenic -5244 NR_104383 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak1_87_526_0.271363213429449_9.17734075835194_2.56559113535766 chr10 21296000 21296915 + 2.56559113535766 NA intron (NM_001042593, intron 1 of 17) CpG 478 NM_001145209 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak2_92_567_0.261069601382909_9.28028192019613_2.56543967688336 chr15 3270326 3271758 + 2.56543967688336 NA promoter-TSS (NM_009155) promoter-TSS (NM_009155) 65 NM_009155 20363 Mm.392203 NM_009155 ENSMUSG00000064373 Selenop AU018766|D15Ucla1|Se-P|Sepp1|selp selenoprotein P protein-coding common_peak2_254_2130_0.138461486223074_11.1265456208942_2.56536367802848 chr19 9981776 9985022 + 2.56536367802848 NA intron (NR_073181, intron 2 of 4) intron (NR_073181, intron 2 of 4) 753 NM_010239 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding unique_peak2_12_102_-0.757691593728642_6.3076547303189_2.56467722642012-3 chr16 3962471 3963527 + 2.56467722642012 NA intron (NM_001081280, intron 3 of 17) B1F|SINE|Alu 13633 NM_175547 268857 Mm.215994 NM_175547 ENSMUSG00000049871 Nlrc3 CLR16.2|D230007K08Rik|mFLJ00348 NLR family, CARD domain containing 3 protein-coding unique_peak2_12_102_-0.757691593728642_6.3076547303189_2.56467722642012 chr1 58726553 58727492 + 2.56467722642012 NA intron (NM_001293804, intron 3 of 9) intron (NM_001293804, intron 3 of 9) -3530 NM_001293805 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding unique_peak2_12_102_-0.757691593728642_6.3076547303189_2.56467722642012-5 chr3 69041075 69041997 + 2.56467722642012 NA intron (NM_025863, intron 2 of 2) intron (NM_025863, intron 2 of 2) 3206 NM_025863 66949 Mm.176695 NM_025863 ENSMUSG00000034317 Trim59 2310035M22Rik|2700022F13Rik|Mrf1|TSBF1 tripartite motif-containing 59 protein-coding unique_peak2_12_102_-0.757691593728642_6.3076547303189_2.56467722642012-4 chr16 33732029 33732913 + 2.56467722642012 NA intron (NM_175256, intron 6 of 14) intron (NM_175256, intron 6 of 14) 48005 NM_175256 77446 Mm.245741 NM_172934 ENSMUSG00000075254 Heg1 4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629|OTTMUSG00000027315 heart development protein with EGF-like domains 1 protein-coding unique_peak2_12_102_-0.757691593728642_6.3076547303189_2.56467722642012-2 chr11 49006594 49007258 + 2.56467722642012 NA Intergenic Intergenic -14680 NM_011579 21822 Mm.15793 NM_011579 ENSMUSG00000078922 Tgtp1 Gtp2|Irgb6|Mg21|Tgtp T cell specific GTPase 1 protein-coding common_peak2_36_293_-0.419888693624953_7.98972799802389_2.56441201356412-2 chr7 139224118 139225680 + 2.56441201356412 NA intron (NM_001143755, intron 6 of 8) intron (NM_001143755, intron 6 of 8) -11592 NM_001162540 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding common_peak2_36_293_-0.419888693624953_7.98972799802389_2.56441201356412 chr15 81819885 81820925 + 2.56441201356412 NA intron (NM_153484, intron 2 of 3) intron (NM_153484, intron 2 of 3) 8991 NM_017376 21685 Mm.270278 NM_017376 ENSMUSG00000022389 Tef 2310028D20Rik thyrotroph embryonic factor protein-coding common_peak1_36_293_-0.419888693624953_7.98972799802389_2.56441201356412 chr2 32161490 32162304 + 2.56441201356412 NA intron (NM_001159634, intron 1 of 31) intron (NM_001159634, intron 1 of 31) 10749 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding unique_peak2_7_66_-0.99644823851896_5.56786507119829_2.56421248726208 chr4 78512337 78512928 + 2.56421248726208 NA Intergenic IAPEz-int|LTR|ERVK -81415 NR_131142 623726 NR_131142 A430085M09Rik EG623726 RIKEN cDNA A430085M09 gene ncRNA common_peak2_110_984_-0.220061746979043_9.83394904085422_2.56293184151741 chr19 6127244 6128943 + 2.56293184151741 NA exon (NM_026912, exon 1 of 8) exon (NM_026912, exon 1 of 8) 122 NM_026912 69024 Mm.329629 NM_026912 ENSMUSG00000024787 Snx15 1500032B08Rik|E130013C21Rik sorting nexin 15 protein-coding unique_peak2_26_210_-0.498891621867591_7.47165337777339_2.56269728696855 chr2 165877512 165879032 + 2.56269728696855 NA 5' UTR (NM_001291158, exon 1 of 24) 5' UTR (NM_001291158, exon 1 of 24) 165 NM_001291158 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak2_30_243_-0.46405513282858_7.6987097711486_2.56251883784757 chr2 18933890 18935744 + 2.56251883784757 NA intron (NM_008845, intron 1 of 9) intron (NM_008845, intron 1 of 9) 63304 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding common_peak1_62_521_-0.306296836618102_8.87475757826083_2.56209780037591 chr2 6723741 6724412 + 2.56209780037591 NA intron (NM_001110229, intron 2 of 14) intron (NM_001110229, intron 2 of 14) -2414 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak2_41_189_0.434231346653907_7.7869712816579_2.56115476107018 chr17 23790102 23791114 + 2.56115476107018 NA Intergenic CpG -4531 NM_029798 76917 Mm.269613 NM_029798 ENSMUSG00000023911 Flywch2 2810417J12Rik|3010014L17Rik|AW548203 FLYWCH family member 2 protein-coding common_peak1_368_3419_0.109931687598733_11.7947464535726_2.56113441865666 chr15 82340428 82343612 + 2.56113441865666 NA intron (NM_177391, intron 1 of 1) intron (NM_177391, intron 1 of 1) 841 NM_177391 338368 Mm.444916 NM_177391 ENSMUSG00000049687 Fam109b C920005C14Rik|IPIP27B|Ses2 family with sequence similarity 109, member B protein-coding common_peak2_108_701_0.236415015225075_9.5735347279171_2.5597650865929 chr5 62790332 62792556 + 2.5597650865929 NA Intergenic ORR1E|LTR|ERVL-MaLR -22379 NM_001170705 100322896 Mm.479821 NM_001170705 ENSMUSG00000090326 Dthd1 Gm17384 death domain containing 1 protein-coding common_peak1_595_7022_-0.0797220953528353_12.7380106721568_2.55952384305518 chr6 41532890 41537831 + 2.55952384305518 NA Intergenic Intergenic 13584 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak2_328_2953_0.118213085926698_11.5875606537281_2.55842395223952 chr9 85747686 85750482 + 2.55842395223952 NA intron (NM_001081282, intron 1 of 28) CpG 250 NM_001081282 108837 Mm.22315 NM_175371 ENSMUSG00000035941 Ibtk 5430411K16Rik|AA409502|BTKI|mKIAA1417 inhibitor of Bruton agammaglobulinemia tyrosine kinase protein-coding unique_peak2_21_72_0.669973183813934_6.52481115078698_2.55806001229448 chr16 58685767 58686488 + 2.55806001229448 NA Intergenic G-rich|Low_complexity|Low_complexity 15919 NM_007757 12892 Mm.291519 NM_007757 ENSMUSG00000022742 Cpox CPX|Cpo|HCP|cac|nct coproporphyrinogen oxidase protein-coding common_peak1_54_276_0.367548852336727_8.29751659221755_2.55792861203125-2 chr6 29768493 29769239 + 2.55792861203125 NA exon (NM_021414, exon 1 of 17) exon (NM_021414, exon 1 of 17) 423 NM_001171000 74340 Mm.210899 NM_021414 ENSMUSG00000029772 Ahcyl2 4631427C17Rik|AI227036|Adohcyase3|mKIAA0828 S-adenosylhomocysteine hydrolase-like 2 protein-coding common_peak1_54_276_0.367548852336727_8.29751659221755_2.55792861203125 chr19 11770313 11770927 + 2.55792861203125 NA intron (NM_025606, intron 1 of 3) intron (NM_025606, intron 1 of 3) 205 NM_025606 94063 Mm.203928 NM_025606 ENSMUSG00000024683 Mrpl16 2310039D06Rik mitochondrial ribosomal protein L16 protein-coding common_peak1_38_309_-0.403180955666378_8.07453392744105_2.55769095070932-2 chrX 42504162 42505031 + 2.55769095070932 NA promoter-TSS (NM_001313691) promoter-TSS (NM_001313691) -726 NM_001313691 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak1_38_309_-0.403180955666378_8.07453392744105_2.55769095070932 chr7 6285657 6286413 + 2.55769095070932 NA promoter-TSS (NM_001024928) promoter-TSS (NM_001024928) -545 NM_001024928 384763 Mm.276279 NM_001024928 ENSMUSG00000054893 Zfp667 A830025F02Rik|Mip1|ZNF667 zinc finger protein 667 protein-coding common_peak1_86_518_0.273207102307971_9.15619427951187_2.55765643589883 chr5 124115765 124116881 + 2.55765643589883 NA TTS (NM_025671) TTS (NM_025671) 215 NM_144509 65105 Mm.29430 NM_144509 ENSMUSG00000029404 Arl6ip4 AA408210|AA408365|Aip-4|Srp25 ADP-ribosylation factor-like 6 interacting protein 4 protein-coding common_peak2_86_518_0.273207102307971_9.15619427951187_2.55765643589883 chr7 34167739 34169177 + 2.55765643589883 NA promoter-TSS (NM_016682) promoter-TSS (NM_016682) 71 NM_016682 50995 Mm.27560 NM_016682 ENSMUSG00000052997 Uba2 AA986091|Arx|Sae2|UBA1|Ubl1a2|Uble1b ubiquitin-like modifier activating enzyme 2 protein-coding common_peak1_83_718_-0.259148694268086_9.36027361330525_2.55761759041746 chrX 134601019 134602081 + 2.55761759041746 NA promoter-TSS (NM_013463) promoter-TSS (NM_013463) 371 NM_001313717 56258 Mm.315909 NM_019868 ENSMUSG00000045427 Hnrnph2 DXHXS1271E|Ftp-3|Ftp3|H'|HNRNP|Hnrph2 heterogeneous nuclear ribonucleoprotein H2 protein-coding common_peak2_83_718_-0.259148694268086_9.36027361330525_2.55761759041746 chr16 44360883 44362846 + 2.55761759041746 NA intron (NM_144550, intron 4 of 17) ORR1A4|LTR|ERVL-MaLR 14463 NM_144550 212514 Mm.24035 NM_144550 ENSMUSG00000043065 Spice1 Ccdc52|D16Ertd480e spindle and centriole associated protein 1 protein-coding common_peak1_113_1014_-0.216152981336007_9.87918752140454_2.55738325065853 chr1 21959910 21961763 + 2.55738325065853 NA intron (NM_001310477, intron 1 of 12) intron (NM_001310477, intron 1 of 12) 1106 NM_001160139 226922 Mm.336519 NM_023872 ENSMUSG00000028033 Kcnq5 7730402H11|9230107O05Rik|AA589396|D1Mgi1 potassium voltage-gated channel, subfamily Q, member 5 protein-coding common_peak1_324_2907_0.119208553291621_11.5654158305654_2.55732037366794 chr11 93884740 93886934 + 2.55732037366794 NA promoter-TSS (NM_134012) promoter-TSS (NM_134012) -71 NM_001013375 217109 Mm.379350 NM_001013375 ENSMUSG00000054079 Utp18 6230425C22Rik|6430513M13|Wdr50 UTP18 small subunit processome component protein-coding common_peak1_122_823_0.219077254035492_9.79603915420097_2.55707005831776 chr1 37490878 37492729 + 2.55707005831776 NA intron (NM_001290801, intron 3 of 14) intron (NM_001290801, intron 3 of 14) -3198 NR_024017 77633 Mm.483177 NR_024017 ENSMUSG00000103948 4930594C11Rik - G1 to S phase transition pseudogene pseudo common_peak1_254_2572_-0.133459377728023_11.2625060528698_2.55701196600395 chr14 79514853 79517508 + 2.55701196600395 NA intron (NM_001286411, intron 1 of 8) intron (NM_001286411, intron 1 of 8) 506 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak2_497_5669_-0.088880323321602_12.4246928581688_2.55663678137007 chr9 65531890 65537515 + 2.55663678137007 NA Intergenic Intergenic 45385 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak2_220_1771_0.151378287493987_10.866852032302_2.55595661887886 chr2 35977640 35980224 + 2.55595661887886 NA intron (NM_029774, intron 1 of 9) intron (NM_029774, intron 1 of 9) 692 NM_029774 74410 Mm.21591 NM_028921 ENSMUSG00000026885 Ttll11 4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e tubulin tyrosine ligase-like family, member 11 protein-coding common_peak1_33_139_0.500865555215561_7.37971579455275_2.55562684788691 chr17 23790142 23790728 + 2.55562684788691 NA Intergenic B1F|SINE|Alu -4358 NM_029798 76917 Mm.269613 NM_029798 ENSMUSG00000023911 Flywch2 2810417J12Rik|3010014L17Rik|AW548203 FLYWCH family member 2 protein-coding common_peak1_70_595_-0.286008974615145_9.07616403315459_2.55543010798954 chr16 14158532 14159332 + 2.55543010798954 NA promoter-TSS (NR_030252) promoter-TSS (NR_030252) 342 NM_001081154 223989 Mm.85442 NM_001081154 ENSMUSG00000060657 Marf1 4921513D23Rik|BC031575|C87306|E030019O05|Lkap|mKIAA0430 meiosis arrest female 1 protein-coding common_peak2_70_595_-0.286008974615145_9.07616403315459_2.55543010798954 chr16 14158557 14159364 + 2.55543010798954 NA promoter-TSS (NR_030252) promoter-TSS (NR_030252) 314 NM_001081154 223989 Mm.85442 NM_001081154 ENSMUSG00000060657 Marf1 4921513D23Rik|BC031575|C87306|E030019O05|Lkap|mKIAA0430 meiosis arrest female 1 protein-coding common_peak2_77_661_-0.271131646013_9.23512158380072_2.5554084892848 chr17 74315601 74317165 + 2.5554084892848 NA promoter-TSS (NM_001146224) promoter-TSS (NM_001146224) 11 NM_001146222 66310 Mm.28536 NM_024428 ENSMUSG00000024067 Dpy30 2810410M20Rik|C87842 dpy-30, histone methyltransferase complex regulatory subunit protein-coding common_peak1_77_661_-0.271131646013_9.23512158380072_2.5554084892848 chr6 30300537 30301825 + 2.5554084892848 NA intron (NM_009459, intron 1 of 6) intron (NM_009459, intron 1 of 6) 3358 NM_009459 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak1_158_1154_0.186199145292978_10.2667767089499_2.5550291448889 chr10 99106631 99108704 + 2.5550291448889 NA promoter-TSS (NM_015737) promoter-TSS (NM_015737) -468 NM_015737 14426 Mm.314 NM_015737 ENSMUSG00000090035 Galnt4 AV011803 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 protein-coding common_peak1_101_893_-0.229847932869506_9.68920705474856_2.55502689287483 chr4 40278691 40280117 + 2.55502689287483 NA promoter-TSS (NM_001033305) promoter-TSS (NM_001033305) 17 NM_001033305 230075 Mm.1103 NM_001033305 ENSMUSG00000071014 Ndufb6 CI-B17|Gm137 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6 protein-coding common_peak2_455_4475_0.0963413321328499_12.1761649870428_2.55499862185359 chr10 86704029 86707951 + 2.55499862185359 NA promoter-TSS (NM_011631) promoter-TSS (NM_011631) 179 NM_001003939 103220 Mm.440762 NM_153595 ENSMUSG00000044937 Ttc41 AI449705|AU041509|Gnn tetratricopeptide repeat domain 41 protein-coding common_peak1_67_371_0.317602072238852_8.69795984722746_2.55493279092725 chr13 97435629 97436605 + 2.55493279092725 NA intron (NR_110432, intron 1 of 1) intron (NR_110432, intron 1 of 1) 1147 NR_110432 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 ENSMUSG00000078952|Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA common_peak1_179_1357_0.172135495692611_10.493335512091_2.55350483912711 chr5 129724218 129725920 + 2.55350483912711 NA promoter-TSS (NM_008095) promoter-TSS (NM_008095) -6 NM_008095 14467 Mm.12468 NM_008095 ENSMUSG00000029432 Gbas AV006093|Nipsnap2 glioblastoma amplified sequence protein-coding common_peak2_184_1406_0.169482624853197_10.5431479256631_2.55345564244972 chr3 138525914 138528526 + 2.55345564244972 NA promoter-TSS (NM_001313980) promoter-TSS (NM_001313980) -48 NM_001313980 13684 Mm.3941 NM_007917 ENSMUSG00000028156 Eif4e EG668879|Eif4e-ps|If4e|eIF-4E eukaryotic translation initiation factor 4E protein-coding common_peak1_190_1836_-0.158764405124556_10.7637537085491_2.553445311975 chr5 34188014 34189668 + 2.553445311975 NA Intergenic Intergenic -1131 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding unique_peak2_23_186_-0.533118991795542_7.28033496398987_2.55313443922954 chr16 92813211 92814289 + 2.55313443922954 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 12324 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_23_186_-0.533118991795542_7.28033496398987_2.55313443922954 chr4 134000459 134001083 + 2.55313443922954 NA promoter-TSS (NM_026144) promoter-TSS (NM_026144) 93 NM_026144 67422 Mm.100290 NM_026144 ENSMUSG00000012117 Dhdds 3222401G21Rik|CIT|DS|HDS|W91638 dehydrodolichyl diphosphate synthase protein-coding common_peak1_116_1044_-0.2122092612071_9.9231825963647_2.55306030383971 chr16 14316723 14317817 + 2.55306030383971 NA promoter-TSS (NM_025345) promoter-TSS (NM_025345) 62 NM_025345 66086 Mm.42072 NM_025345 ENSMUSG00000022677 Fopnl 0610037P05Rik Fgfr1op N-terminal like protein-coding common_peak2_284_2458_0.128748286832414_11.3282301630123_2.55303834997905 chr3 108016753 108019741 + 2.55303834997905 NA promoter-TSS (NM_010358) promoter-TSS (NM_010358) -274 NM_010358 14862 Mm.37199 NM_010358 ENSMUSG00000058135 Gstm1 Gstb-1|Gstb1 glutathione S-transferase, mu 1 protein-coding unique_peak2_24_88_0.610281761169986_6.78087431155139_2.55195960510772 chr8 119585767 119586401 + 2.55195960510772 NA intron (NM_026648, intron 5 of 11) RLTR1B-int|LTR|ERV1 10849 NM_026648 68270 Mm.41977 NM_026648 ENSMUSG00000031831 Dnaaf1 4930457P18Rik|Lrrc50 dynein, axonemal assembly factor 1 protein-coding common_peak1_24_88_0.610281761169986_6.78087431155139_2.55195960510772 chr3 60573272 60573950 + 2.55195960510772 NA intron (NM_001310514, intron 2 of 8) intron (NM_001310514, intron 2 of 8) 72432 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_24_88_0.610281761169986_6.78087431155139_2.55195960510772 chr14 43829743 43830492 + 2.55195960510772 NA Intergenic Intergenic -10478 NM_007894 13586 Mm.86948 NM_007894 ENSMUSG00000072601 Ear1 EAR-1|ECP 1|Raf1 eosinophil-associated, ribonuclease A family, member 1 protein-coding common_peak2_45_215_0.410185613116397_7.95998030872167_2.55119505669389 chr14 122223294 122224072 + 2.55119505669389 NA intron (NM_029556, intron 1 of 7) intron (NM_029556, intron 1 of 7) 9955 NR_015532 68245 Mm.443285 NR_015532 ENSMUSG00000100585 1700108J01Rik - RIKEN cDNA 1700108J01 gene ncRNA common_peak2_45_215_0.410185613116397_7.95998030872167_2.55119505669389-2 chr16 34690275 34691394 + 2.55119505669389 NA intron (NM_172824, intron 1 of 12) CpG 218 NM_172824 239839 Mm.272045 NM_172824 ENSMUSG00000022833 Ccdc14 G630039H03Rik coiled-coil domain containing 14 protein-coding common_peak2_80_471_0.283699033631038_9.02449256617736_2.55012139474255 chr4 108070331 108072089 + 2.55012139474255 NA intron (NM_011327, intron 12 of 15) intron (NM_011327, intron 12 of 15) -16147 NR_105823 102465213 NR_105823 ENSMUSG00000098980 Mir6397 Gm28004|mmu-mir-6397 microRNA 6397 ncRNA common_peak1_246_2045_0.140778688726394_11.0689797741085_2.54969168577444 chr10 81429580 81432311 + 2.54969168577444 NA Intergenic CpG -3772 NM_026756 18029 Mm.426936 NM_008688 ENSMUSG00000055053 Nfic 1110019L22Rik|1500041O16Rik|AA589446|AI746521|NF1-C nuclear factor I/C protein-coding common_peak2_149_1069_0.193366938187514_10.1600785503823_2.54961020812134 chr9 40992675 40996346 + 2.54961020812134 NA exon (NM_019465, exon 2 of 10) exon (NM_019465, exon 2 of 10) 10118 NM_001281954 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak1_20_163_-0.580077360819586_7.06751332420829_2.54959105505431 chr7 30121961 30122392 + 2.54959105505431 NA intron (NM_001081007, intron 1 of 4) CpG 228 NM_001081007 233060 Mm.443484 NM_001081007 ENSMUSG00000074220 Zfp382 5930415A09Rik|Znf382 zinc finger protein 382 protein-coding common_peak1_20_163_-0.580077360819586_7.06751332420829_2.54959105505431-2 chrX 74368003 74368550 + 2.54959105505431 NA TTS (NM_001256104) TTS (NM_001256104) 272 NR_045779 27643 Mm.3979 NM_145405 ENSMUSG00000015290 Ubl4a DXHXS254E|DXS254E|DXS254Eh|Gdx|Ubl4 ubiquitin-like 4A protein-coding unique_peak2_20_163_-0.580077360819586_7.06751332420829_2.54959105505431 chr18 64920661 64921789 + 2.54959105505431 NA intron (NM_001114386, intron 1 of 30) intron (NM_001114386, intron 1 of 30) 33469 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding unique_peak2_20_163_-0.580077360819586_7.06751332420829_2.54959105505431-2 chr6 129112833 129114350 + 2.54959105505431 NA Intergenic Intergenic -2927 NR_073569 724020 Mm.424965 NR_073569 Klrb1-ps1 Nkrp1e killer cell lectin-like receptor subfamily B member 1, pseudogene 1 pseudo common_peak1_176_1328_0.173535531918935_10.4628931552356_2.54845841993124 chr2 35688760 35691270 + 2.54845841993124 NA intron (NM_001290641, intron 3 of 15) intron (NM_001290641, intron 3 of 15) -1979 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_267_2271_0.134021203017754_11.2167577210136_2.5482510714316 chr15 86077461 86080868 + 2.5482510714316 NA intron (NM_001205353, intron 1 of 18) Charlie1b|DNA|hAT-Charlie 20437 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak2_181_1377_0.170597181202112_10.5136587633053_2.54769149524131 chr7 88276626 88279748 + 2.54769149524131 NA 5' UTR (NM_009982, exon 1 of 7) 5' UTR (NM_009982, exon 1 of 7) 102 NM_001311790 13032 Mm.89295 NM_009982 ENSMUSG00000030560 Ctsc AI047818|CatC|DPP1|DPPI cathepsin C protein-coding common_peak1_39_318_-0.399666074947737_8.117579576291_2.54767516633533 chr11 49090025 49090822 + 2.54767516633533 NA intron (NM_010999, intron 2 of 5) intron (NM_010999, intron 2 of 5) 3406 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_57_475_-0.319542137609018_8.73504669450343_2.54704402461125 chr15 96376449 96378362 + 2.54704402461125 NA intron (NM_175251, intron 15 of 20) intron (NM_175251, intron 15 of 20) 83438 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak1_306_3197_-0.118762951580196_11.5835727476902_2.54681148050978 chr15 27679915 27682146 + 2.54681148050978 NA intron (NM_001242424, intron 1 of 8) intron (NM_001242424, intron 1 of 8) 512 NM_001242424 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak2_51_256_0.376409006633409_8.19382905251058_2.54679160344407 chr8 122869203 122870955 + 2.54679160344407 NA Intergenic Intergenic 21705 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding common_peak2_46_222_0.402231187505713_8.00201549367316_2.54678201597383 chr8 111337360 111338613 + 2.54678201597383 NA 5' UTR (NM_029005, exon 1 of 11) 5' UTR (NM_029005, exon 1 of 11) 219 NM_001310613 74568 Mm.207971 NM_029005 ENSMUSG00000012519 Mlkl 9130019I15Rik mixed lineage kinase domain-like protein-coding common_peak1_114_753_0.228145677703166_9.67249355212025_2.54654352750005 chr19 5105842 5107129 + 2.54654352750005 NA intron (NM_029576, intron 1 of 5) intron (NM_029576, intron 1 of 5) 511 NM_029576 76308 Mm.182563 NM_029576 ENSMUSG00000024870 Rab1b 1110011F09Rik RAB1B, member RAS oncogene family protein-coding common_peak1_140_986_0.200359329122906_10.0470859390179_2.54643763389619 chr6 113237186 113238661 + 2.54643763389619 NA promoter-TSS (NM_026849) promoter-TSS (NM_026849) 80 NM_026849 97287 Mm.197816 NM_026849 ENSMUSG00000030269 Mtmr14 1110061O04Rik|AW553738|C76151 myotubularin related protein 14 protein-coding common_peak1_34_145_0.491621155643516_7.43563513670178_2.54561479596189 chr9 70371239 70371904 + 2.54561479596189 NA intron (NM_181072, intron 22 of 27) intron (NM_181072, intron 22 of 27) 34182 NR_049200 100885839 NR_049200 ENSMUSG00000093763 Mir5626 Gm25590|mir-5626|mmu-mir-5626 microRNA 5626 ncRNA common_peak2_34_145_0.491621155643516_7.43563513670178_2.54561479596189 chr12 112593477 112594622 + 2.54561479596189 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 5265 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding common_peak1_65_356_0.324151994818138_8.64185626143817_2.5451957733793 chr5 115340735 115341833 + 2.5451957733793 NA promoter-TSS (NM_029645) promoter-TSS (NM_029645) 37 NM_026933 69076 Mm.27951 NM_026933 ENSMUSG00000029535 Triap1 1810015M01Rik|AU020874|AU043831|P53csv|Wf-1 TP53 regulated inhibitor of apoptosis 1 protein-coding common_peak1_56_466_-0.322780020159488_8.70588872962992_2.54414266464538 chr7 143666192 143667410 + 2.54414266464538 NA non-coding (NR_131763, exon 6 of 6) non-coding (NR_131763, exon 6 of 6) -17137 NM_023680 79202 Mm.261384 NM_023680 ENSMUSG00000010751 Tnfrsf22 2810028K06Rik|C130035G06Rik|SOBa|Tnfrh2|Tnfrsf1al2|mDcTrailr2 tumor necrosis factor receptor superfamily, member 22 protein-coding common_peak1_124_841_0.216444355948308_9.82589860104055_2.543744960288 chr5 142401013 142402433 + 2.543744960288 NA exon (NM_199068, exon 1 of 9) exon (NM_199068, exon 1 of 9) 226 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf forkhead box K1 protein-coding common_peak1_188_1446_0.166894469573341_10.5822964413184_2.5433600331058 chr17 31657866 31659396 + 2.5433600331058 NA intron (NM_024187, intron 1 of 7) CpG 123 NM_024187 108121 Mm.379289 NM_024187 ENSMUSG00000061613 U2af1 2010107D16Rik|35kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 protein-coding unique_peak2_27_218_-0.488222309583248_7.53067590480955_2.54322210011313-2 chr7 66689076 66690556 + 2.54322210011313 NA promoter-TSS (NM_080443) promoter-TSS (NM_080443) -73 NM_152815 72635 Mm.289796 NM_152815 ENSMUSG00000053091 Lins1 2700083B01Rik|AW547219|Lins|Lins2|Wins2 lines homolog 1 protein-coding common_peak1_27_218_-0.488222309583248_7.53067590480955_2.54322210011313 chr19 6974432 6975025 + 2.54322210011313 NA promoter-TSS (NM_008889) promoter-TSS (NM_008889) -320 NM_008889 18938 Mm.140 NM_008889 ENSMUSG00000056612 Ppp1r14b AOM172|PHI-1|PLCB3N|Png protein phosphatase 1, regulatory (inhibitor) subunit 14B protein-coding common_peak2_27_218_-0.488222309583248_7.53067590480955_2.54322210011313 chr7 127260105 127260922 + 2.54322210011313 NA intron (NM_023203, intron 1 of 2) CpG 154 NM_023203 66422 Mm.29898 NM_023203 ENSMUSG00000042462 Dctpp1 2410015N17Rik|AI854235|RS21-C6 dCTP pyrophosphatase 1 protein-coding unique_peak2_27_218_-0.488222309583248_7.53067590480955_2.54322210011313 chr17 65906213 65907802 + 2.54322210011313 NA Intergenic ORR1F|LTR|ERVL-MaLR -21252 NM_009067 19765 Mm.17009 NM_009067 ENSMUSG00000024096 Ralbp1 RLIP76|Rip1 ralA binding protein 1 protein-coding common_peak2_91_795_-0.244939194077427_9.51415502350494_2.54307540069303 chr17 31519393 31520920 + 2.54307540069303 NA promoter-TSS (NM_001083891) promoter-TSS (NM_001083891) 41 NM_001083891 78330 Mm.28349 NM_030087 ENSMUSG00000024038 Ndufv3 1500032D16Rik NADH dehydrogenase (ubiquinone) flavoprotein 3 protein-coding common_peak1_91_795_-0.244939194077427_9.51415502350494_2.54307540069303 chr11 115403247 115404450 + 2.54307540069303 NA promoter-TSS (NM_026729) promoter-TSS (NM_026729) 82 NM_026729 68572 Mm.271062 NM_026729 ENSMUSG00000018858 Mrpl58 1110001A02Rik|1110002E03Rik|Ict1|MRP-L58 mitochondrial ribosomal protein L58 protein-coding common_peak1_155_1452_-0.178650915652268_10.4154935298067_2.54248498636976 chr2 122028580 122029384 + 2.54248498636976 NA intron (NM_001256055, intron 2 of 7) CpG-8471 399 NM_001256055 100042807 Mm.329403 NM_001256055 ENSMUSG00000043424 Eif3j2 ENSMUSG00000043424|Eif3j-2|Gm9781|eIF3 p35|eIF3j-B eukaryotic translation initiation factor 3, subunit J2 protein-coding common_peak1_94_584_0.256176975804445_9.32038130237299_2.5423628633911-2 chr2 34753540 34754668 + 2.5423628633911 NA intron (NM_025709, intron 2 of 26) CpG 1128 NM_025709 66691 Mm.156452 NM_025709 ENSMUSG00000026867 Gapvd1 2010005B09Rik|4432404J10Rik|AW108497|Gapex-5|RAP6|RME-6|mKIAA1521 GTPase activating protein and VPS9 domains 1 protein-coding common_peak1_94_584_0.256176975804445_9.32038130237299_2.5423628633911 chr19 4397263 4398573 + 2.5423628633911 NA promoter-TSS (NM_001001984) promoter-TSS (NM_001001984) -841 NM_001001984 225876 Mm.31941 NM_001001984 ENSMUSG00000054611 Kdm2a 100043628|5530401A10Rik|AA589516|AW536790|Cxxc8|Fbl11|Fbl7|Fbxl11|Gm4560|Jhdm1|Jhdm1a|lalina lysine (K)-specific demethylase 2A protein-coding common_peak1_18_147_-0.60908916223206_6.90490878451292_2.54173774283295 chr10 77630325 77630826 + 2.54173774283295 NA intron (NM_019803, intron 1 of 5) intron (NM_019803, intron 1 of 5) 8254 NM_019803 22213 Mm.458125 NM_019803 ENSMUSG00000009293 Ube2g2 1110003O05Rik|D10Xrf369|UBC7|Ubc7p ubiquitin-conjugating enzyme E2G 2 protein-coding common_peak1_18_147_-0.60908916223206_6.90490878451292_2.54173774283295-2 chr3 132870910 132871346 + 2.54173774283295 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 7468 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak1_110_719_0.232065071035022_9.60788563184719_2.54142748004007 chr9 99130584 99132144 + 2.54142748004007 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 8847 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak2_200_1567_0.159968372187798_10.6946940302091_2.54137873631509 chr11 59162366 59164581 + 2.54137873631509 NA exon (NM_001270791, exon 1 of 2) exon (NM_001270791, exon 1 of 2) 272 NM_001270791 216792 Mm.266175 NM_173785 ENSMUSG00000049287 Iba57 4930543L23Rik|A230051G13Rik|C1orf69 IBA57 homolog, iron-sulfur cluster assembly protein-coding common_peak1_32_259_-0.445047865367575_7.79984388034467_2.54090888691092 chr13 113197869 113198542 + 2.54090888691092 NA Intergenic Intergenic -11454 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding common_peak1_32_259_-0.445047865367575_7.79984388034467_2.54090888691092-2 chr6 50521110 50521790 + 2.54090888691092 NA Intergenic Intergenic 45024 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding common_peak1_32_259_-0.445047865367575_7.79984388034467_2.54090888691092-3 chrX 10215996 10216538 + 2.54090888691092 NA 5' UTR (NM_001177952, exon 1 of 17) 5' UTR (NM_001177952, exon 1 of 17) 186 NM_001177952 19893 Mm.247556 NM_011285 ENSMUSG00000031174 Rpgr Rp3h retinitis pigmentosa GTPase regulator protein-coding common_peak1_210_2060_-0.148529450400293_10.9348640643391_2.54058497853744 chr17 27819233 27821621 + 2.54058497853744 NA 5' UTR (NM_001271511, exon 1 of 4) 5' UTR (NM_001271511, exon 1 of 4) 115 NM_001033279 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak2_42_343_-0.380537584448147_8.23599596247803_2.54002174932475 chr6 116263637 116264883 + 2.54002174932475 NA promoter-TSS (NM_001290338) promoter-TSS (NM_001290338) 41 NM_001290338 67492 Mm.272772 NM_001081317 ENSMUSG00000042213 Zfand4 Anubl1 zinc finger, AN1-type domain 4 protein-coding common_peak2_54_448_-0.329280616355231_8.64593132656353_2.53959623225596 chr6 30226479 30228426 + 2.53959623225596 NA intron (NM_001169576, intron 3 of 4) intron (NM_001169576, intron 3 of 4) 16351 NM_001169577 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak2_181_1735_-0.162593878538075_10.6802542931754_2.53949124211232 chr6 67373002 67377223 + 2.53949124211232 NA intron (NM_008354, intron 1 of 15) intron (NM_008354, intron 1 of 15) 1025 NM_008354 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak1_151_1089_0.190088717291669_10.1851567783101_2.53883848931753 chr15 100728016 100729754 + 2.53883848931753 NA intron (NM_172451, intron 1 of 11) intron (NM_172451, intron 1 of 11) 491 NM_001161767 207839 Mm.22969 NM_172451 ENSMUSG00000037280 Galnt6 4632410F13|AW047994|GalNAc-T6 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 protein-coding common_peak1_195_1517_0.16214478386793_10.6490284673494_2.53878791725986 chr11 59162548 59164230 + 2.53878791725986 NA exon (NM_001270791, exon 1 of 2) exon (NM_001270791, exon 1 of 2) 356 NM_001270791 216792 Mm.266175 NM_173785 ENSMUSG00000049287 Iba57 4930543L23Rik|A230051G13Rik|C1orf69 IBA57 homolog, iron-sulfur cluster assembly protein-coding common_peak2_53_439_-0.332539835498709_8.6150897957753_2.53800559215658 chr5 130002185 130003516 + 2.53800559215658 NA promoter-TSS (NM_010368) promoter-TSS (NM_010368) -22 NM_010368 110006 Mm.3317 NM_010368 ENSMUSG00000025534 Gusb AI747421|Gur|Gus|Gus-r|Gus-s|Gus-t|Gus-u|Gut|asd|g glucuronidase, beta protein-coding common_peak1_64_349_0.325703408500567_8.61406281608261_2.53800559215658 chr12 104064011 104065224 + 2.53800559215658 NA Intergenic Intergenic -13342 NR_002861 321018 Mm.297023 NR_002861 Serpina4-ps1 KALps|Klst serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1 pseudo common_peak2_35_151_0.483370159615438_7.4896125932513_2.53753509174422 chr1 74600823 74601598 + 2.53753509174422 NA promoter-TSS (NM_175031) promoter-TSS (NM_175031) 187 NM_021313 57751 Mm.280920 NM_021313 ENSMUSG00000026171 Rnf25 0610009H16Rik|AO7 ring finger protein 25 protein-coding unique_peak2_35_151_0.483370159615438_7.4896125932513_2.53753509174422 chr5 134549388 134550519 + 2.53753509174422 NA intron (NM_001039162, intron 1 of 15) intron (NM_001039162, intron 1 of 15) 2481 NM_001039162 269713 Mm.255138 NM_009990 ENSMUSG00000063146 Clip2 B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4 CAP-GLY domain containing linker protein 2 protein-coding common_peak2_320_2863_0.119289158244801_11.5434603563867_2.5372641036133 chr8 115705205 115708747 + 2.5372641036133 NA promoter-TSS (NM_001025577) promoter-TSS (NM_001025577) -82 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_78_455_0.289209076948575_8.97749455263903_2.53723614454017 chr11 97041439 97042157 + 2.53723614454017 NA promoter-TSS (NM_027026) promoter-TSS (NM_027026) 212 NM_026154 107732 Mm.208946 NM_026154 ENSMUSG00000001445 Mrpl10 0610040E02Rik|C78440|MRP-L8|Rpml8 mitochondrial ribosomal protein L10 protein-coding common_peak1_52_430_-0.335802293645987_8.58364291226611_2.53691031096954 chr11 70000377 70001299 + 2.53691031096954 NA TTS (NM_030064) TTS (NM_030064) 212 NM_007888 13543 Mm.5114 NM_007888 ENSMUSG00000020888 Dvl2 - dishevelled segment polarity protein 2 protein-coding common_peak1_63_341_0.331625370611983_8.58366520019189_2.53691031096954 chr6 147090853 147092041 + 2.53691031096954 NA 5' UTR (NM_001081237, exon 1 of 3) 5' UTR (NM_001081237, exon 1 of 3) 372 NM_001081237 232539 Mm.491206 NM_001081237 ENSMUSG00000040102 Klhl42 A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340 kelch-like 42 protein-coding common_peak1_19_62_0.71385430413086_6.33420707556535_2.53664737845086-2 chr1 87652568 87653127 + 2.53664737845086 NA intron (NR_122078, intron 2 of 27) intron (NR_122078, intron 2 of 27) 32535 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding unique_peak1_19_62_0.71385430413086_6.33420707556535_2.53664737845086 chr5 52783056 52783529 + 2.53664737845086 NA intron (NM_001308144, intron 1 of 12) intron (NM_001308144, intron 1 of 12) 237 NM_030185 78796 Mm.266886 NM_030185 ENSMUSG00000029179 Zcchc4 4930449I23Rik zinc finger, CCHC domain containing 4 protein-coding common_peak1_19_62_0.71385430413086_6.33420707556535_2.53664737845086 chr1 36722867 36723371 + 2.53664737845086 NA intron (NR_040290, intron 2 of 8) B2_Mm2|SINE|B2 8581 NR_040290 71166 Mm.157049 NR_040290 ENSMUSG00000102416 4933424G06Rik 1700104I15Rik RIKEN cDNA 4933424G06 gene ncRNA common_peak1_14_117_-0.700598927950494_6.5323435853866_2.53385960387708 chr7 3445256 3445566 + 2.53385960387708 NA Intergenic MT2C_Mm|LTR|ERVL 20749 NM_133183 54378 Mm.424047 NM_133183 ENSMUSG00000078815 Cacng6 2310033H20Rik calcium channel, voltage-dependent, gamma subunit 6 protein-coding unique_peak2_14_117_-0.700598927950494_6.5323435853866_2.53385960387708 chr11 11788316 11788929 + 2.53385960387708 NA Intergenic Intergenic 20340 NM_021891 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding common_peak1_45_369_-0.366308345236448_8.34822728789809_2.5326219961517 chr3 133077963 133078931 + 2.5326219961517 NA intron (NM_026231, intron 3 of 11) intron (NM_026231, intron 3 of 11) 13293 NM_026231 67553 Mm.304899 NM_026231 ENSMUSG00000028018 Gstcd 4933434L15Rik glutathione S-transferase, C-terminal domain containing protein-coding common_peak2_170_1614_-0.168685213877829_10.5729758426424_2.53204510145519 chr11 79657804 79661461 + 2.53204510145519 NA intron (NM_175543, intron 3 of 14) URR1A|DNA|hAT-Charlie 15454 NR_045898 72218 Mm.443271 NR_045898 ENSMUSG00000086569 Rab11fip4os2 1700020F10Rik|4930542H20Rik|Rab11fib4os2 RAB11 family interacting protein 4 (class II), opposite strand 2 ncRNA common_peak1_170_1614_-0.168685213877829_10.5729758426424_2.53204510145519 chr1 64736259 64738389 + 2.53204510145519 NA 5' UTR (NM_022721, exon 1 of 2) 5' UTR (NM_022721, exon 1 of 2) 426 NM_001042659 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_48_395_-0.352480383168926_8.45311642849515_2.53182732091079 chr18 10532559 10533219 + 2.53182732091079 NA exon (NM_001083628, exon 19 of 33) exon (NM_001083628, exon 19 of 33) 77463 NM_001081222 77805 Mm.210996 NM_144542 ENSMUSG00000024293 Esco1 A930014I12Rik establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding common_peak1_79_679_-0.265032086134214_9.27687489307059_2.53120885380813 chr1 180331517 180332880 + 2.53120885380813 NA 5' UTR (NM_001081175, exon 2 of 8) 5' UTR (NM_001081175, exon 2 of 8) -1649 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_65_548_-0.296730080157962_8.95229729892622_2.53111922873852 chr12 112867813 112869123 + 2.53111922873852 NA Intergenic Intergenic -7552 NM_019925 56696 Mm.20455 NM_019925 ENSMUSG00000021298 Gpr132 G2a G protein-coupled receptor 132 protein-coding common_peak1_21_170_-0.558054772191947_7.13882512878993_2.52836666528552 chr4 106827942 106828399 + 2.52836666528552 NA Intergenic CpG -28339 NM_025590 329910 Mm.222956 NM_025590 ENSMUSG00000034853 Acot11 1110020M10Rik|2010309H15Rik|AW060409|BFIT|BFIT1|Thea|Them1|mKIAA0707 acyl-CoA thioesterase 11 protein-coding common_peak2_29_116_0.538291713014298_7.13951057609055_2.52836666528552 chr12 8584602 8585631 + 2.52836666528552 NA intron (NM_177802, intron 1 of 6) MMVL30-int|LTR|ERV1 13950 NM_177802 328059 Mm.46326 NM_177802 ENSMUSG00000020600 Slc7a15 Arpat solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 protein-coding common_peak2_29_116_0.538291713014298_7.13951057609055_2.52836666528552-2 chr6 129757452 129758609 + 2.52836666528552 NA Intergenic L1_Mur2|LINE|L1 -17546 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding unique_peak2_21_170_-0.558054772191947_7.13882512878993_2.52836666528552 chr11 69340269 69341288 + 2.52836666528552 NA promoter-TSS (NR_027827) promoter-TSS (NR_027827) 9 NR_027827 80515 Mm.5324 NM_020591 ENSMUSG00000043419 Chd3os 2310043C11Rik|A030009H04Rik|AA589459|AB041807|MNCb-2875|RNF21 chromodomain helicase DNA binding protein 3, opposite strand ncRNA common_peak2_112_736_0.22999868907733_9.64052015363374_2.52699566271716 chr2 119546990 119548444 + 2.52699566271716 NA promoter-TSS (NM_172857) promoter-TSS (NM_172857) 10 NM_019769 56398 Mm.214765 NM_019769 ENSMUSG00000014077 Chp1 1500003O03Rik|AA960066|AI046351|Cahp|Chp|Sid470p|p24|vac calcineurin-like EF hand protein 1 protein-coding common_peak2_28_226_-0.477885172778347_7.58760590090174_2.5263901584103 chr4 88773062 88773975 + 2.5263901584103 NA promoter-TSS (NM_001161609).4 promoter-TSS (NM_001161609).4 -316 NM_001243155 545646 Mm.380019 NM_001243155 ENSMUSG00000094271 Gm13290 OTTMUSG00000011291 predicted gene 13290 protein-coding common_peak2_72_613_-0.27977581898455_9.1222069358779_2.52616071916201 chr18 38631088 38632634 + 2.52616071916201 NA Intergenic Intergenic -30593 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty homolog 4 (Drosophila) protein-coding common_peak1_24_194_-0.521315121613227_7.346672752943_2.52615554988841 chr4 53919985 53920496 + 2.52615554988841 NA Intergenic Intergenic 94195 NM_028053 52076 Mm.27184 NM_028053 ENSMUSG00000028420 Tmem38b 1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b transmembrane protein 38B protein-coding unique_peak2_24_194_-0.521315121613227_7.346672752943_2.52615554988841 chr1 131192049 131193448 + 2.52615554988841 NA intron (NM_018750, intron 2 of 5) intron (NM_018750, intron 2 of 5) 7437 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak1_34_275_-0.427078742254634_7.89498508565085_2.52566629384499 chr7 135716649 135717269 + 2.52566629384499 NA promoter-TSS (NM_001081117) promoter-TSS (NM_001081117) -580 NM_001081117 17345 Mm.4078 NM_001081117 ENSMUSG00000031004 Mki67 D630048A14Rik|Ki-67|Ki67 antigen identified by monoclonal antibody Ki 67 protein-coding common_peak2_336_3047_0.115535627650308_11.6314150013185_2.52560048391267 chr11 107414839 107419787 + 2.52560048391267 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 53407 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_273_2338_0.131273721368789_11.2573130070368_2.52539286522764 chr4 137992660 137995829 + 2.52539286522764 NA intron (NM_172703, intron 2 of 34) CpG-10542 788 NM_172703 230861 Mm.268903 NM_172703 ENSMUSG00000028760 Eif4g3 1500002J22Rik|4930523M17Rik|G1-419-52|eIF4GII|repro8 eukaryotic translation initiation factor 4 gamma, 3 protein-coding common_peak2_217_1741_0.151825638117128_10.8424417276574_2.52528229658999 chr3 109122143 109124793 + 2.52528229658999 NA intron (NM_172685, intron 1 of 9) intron (NM_172685, intron 1 of 9) 319 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak1_119_798_0.219829362042439_9.7519663739492_2.52480941958689 chr14 70099615 70100725 + 2.52480941958689 NA promoter-TSS (NM_021328) promoter-TSS (NM_021328) 25 NM_021328 57784 Mm.24186 NM_021328 ENSMUSG00000022089 Bin3 1700015F07Rik bridging integrator 3 protein-coding common_peak1_70_394_0.307450702782551_8.77943419445574_2.52475841869289 chr10 81523746 81524615 + 2.52475841869289 NA promoter-TSS (NM_010304) promoter-TSS (NM_010304) 45 NM_010304 14676 Mm.1546 NM_010304 ENSMUSG00000034792 Gna15 G[a]15|Galpha15 guanine nucleotide binding protein, alpha 15 protein-coding common_peak2_303_2671_0.123109155668264_11.4452588703082_2.52419098494061 chr9 44878210 44882311 + 2.52419098494061 NA intron (NM_001081049, intron 1 of 35) intron (NM_001081049, intron 1 of 35) 1014 NM_001081049 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak1_203_1598_0.157941176019836_10.7219248114903_2.52344798644776 chr18 60525510 60527035 + 2.52344798644776 NA promoter-TSS (NM_026302) promoter-TSS (NM_026302) 51 NM_026302 67665 Mm.272801 NM_026302 ENSMUSG00000024603 Dctn4 1110001K06Rik|4930547K17Rik|C130039E17Rik|p62 dynactin 4 protein-coding common_peak2_150_1397_-0.180628260389884_10.3588345151805_2.52315284792072 chr2 154603023 154604706 + 2.52315284792072 NA promoter-TSS (NM_021534) promoter-TSS (NM_021534) -191 NM_021534 59038 Mm.24673 NM_021534 ENSMUSG00000000876 Pxmp4 3010018P03Rik|Pmp24 peroxisomal membrane protein 4 protein-coding common_peak1_155_1127_0.18661671958178_10.2328597121897_2.52261917840453 chr1 92472982 92474577 + 2.52261917840453 NA promoter-TSS (NM_024197) promoter-TSS (NM_024197) -21 NM_024197 67273 Mm.248778 NM_024197 ENSMUSG00000026260 Ndufa10 2900053E13Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 protein-coding common_peak2_83_717_-0.25714076765184_9.35926964999713_2.52084584821807 chr1 133660326 133662171 + 2.52084584821807 NA promoter-TSS (NM_001166552) promoter-TSS (NM_001166552) 151 NM_001276767 70579 Mm.245357 NM_144530 ENSMUSG00000102976 Zc3h11a 1110003F06Rik|5730454B08Rik|G630041M05Rik|Zc3hdc11a|Zc3hh11a|mKIAA0663 zinc finger CCCH type containing 11A protein-coding common_peak1_76_440_0.292086695215545_8.93067819316529_2.52067952604603 chr1 178187544 178188408 + 2.52067952604603 NA intron (NM_024282, intron 1 of 4) CpG 559 NM_024282 78825 Mm.440132 NM_024282 ENSMUSG00000026502 Desi2 5830417C01Rik|DeSI-2|Fam152a|Pppde1 desumoylating isopeptidase 2 protein-coding common_peak2_76_440_0.292086695215545_8.93067819316529_2.52067952604603 chr19 17393903 17394806 + 2.52067952604603 NA exon (NM_019437, exon 1 of 4) exon (NM_019437, exon 1 of 4) 311 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding common_peak1_35_283_-0.418449446445658_7.94052239628185_2.52006814748759 chr4 102511121 102511927 + 2.52006814748759 NA intron (NM_019840, intron 5 of 14) intron (NM_019840, intron 5 of 14) -58536 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak1_198_1548_0.159860365057849_10.6770516113185_2.51994543627637 chr8 95805597 95807599 + 2.51994543627637 NA promoter-TSS (NR_015574) promoter-TSS (NR_015574) -232 NR_015574 319960 Mm.386996 NR_015574 ENSMUSG00000074136 4930513N10Rik - RIKEN cDNA 4930513N10 gene ncRNA common_peak2_299_3110_-0.119788348872001_11.5432685050984_2.51963277166278 chr1 16103228 16106565 + 2.51963277166278 NA promoter-TSS (NM_011291) promoter-TSS (NM_011291) -463 NM_011291 19989 Mm.319659 NM_011291 ENSMUSG00000043716 Rpl7 Rpl7a|Surf-3 ribosomal protein L7 protein-coding common_peak2_115_763_0.224459108849533_9.68965838246051_2.51936752694801 chr17 84858542 84861022 + 2.51936752694801 NA Intergenic Intergenic -68996 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak1_112_1002_-0.214586392439781_9.86281269439229_2.51921324074727 chr1 184844696 184845932 + 2.51921324074727 NA intron (NM_133684, intron 1 of 7) intron (NM_133684, intron 1 of 7) 533 NM_133684 67247 Mm.177724 NM_133684 ENSMUSG00000073481 Marc2 2810484M10Rik|Mosc2|mARC1 mitochondrial amidoxime reducing component 2 protein-coding common_peak1_166_1570_-0.170720859606236_10.5321070354911_2.51887425682997 chr1 182519441 182521316 + 2.51887425682997 NA Intergenic Intergenic -2895 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_141_1302_-0.187849511534761_10.2536966128008_2.51878953401262 chr19 46960719 46962952 + 2.51878953401262 NA intron (NM_001164363, intron 1 of 17) CpG 516 NM_029810 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak1_60_320_0.33808996392467_8.49547446908464_2.51838291415719 chr11 29525964 29526942 + 2.51838291415719 NA promoter-TSS (NM_001282120) promoter-TSS (NM_001282120) 56 NM_133767 76784 Mm.285429 NM_133767 ENSMUSG00000020459 Mtif2 2310038D14Rik|2410112O06Rik|IF-2(Mt)|IF-2mt|IF2(mt) mitochondrial translational initiation factor 2 protein-coding common_peak1_328_3467_-0.113220986530347_11.7032776899567_2.51833272105559 chr12 69680972 69682991 + 2.51833272105559 NA promoter-TSS (NM_001135559) promoter-TSS (NM_001135559) -129 NM_001135559 20663 Mm.3770 NM_001135559 ENSMUSG00000034801 Sos2 SOS-2|mSOS-2 son of sevenless homolog 2 (Drosophila) protein-coding common_peak1_505_5108_0.0896293080080195_12.3636398744037_2.51701425476701 chr3 135438176 135441087 + 2.51701425476701 NA promoter-TSS (NR_030689) promoter-TSS (NR_030689) 872 NM_025356 66105 Mm.49884 NM_025356 ENSMUSG00000078578 Ube2d3 1100001F19Rik|9430029A22Rik|AA414951 ubiquitin-conjugating enzyme E2D 3 protein-coding common_peak1_25_94_0.585565636309984_6.86263842648594_2.51685255950836 chr11 52341253 52341917 + 2.51685255950836 NA Intergenic Intergenic -19277 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding common_peak1_25_94_0.585565636309984_6.86263842648594_2.51685255950836-2 chr5 107730877 107731459 + 2.51685255950836 NA Intergenic B1_Mur2|SINE|Alu -5363 NM_001267621 14581 Mm.2078 NM_010278 ENSMUSG00000029275 Gfi1 AW495828|Gfi-1|Pal-1|Pal1 growth factor independent 1 protein-coding common_peak2_146_1043_0.193104756494083_10.1244583748169_2.51602375196067 chr5 88553037 88555316 + 2.51602375196067 NA promoter-TSS (NM_023054) promoter-TSS (NM_023054) -307 NM_023054 65961 Mm.490364 NM_023054 ENSMUSG00000070697 Utp3 2400011K09Rik|AW557551|C87704|Crl1|Crlz1|Sas10 UTP3 small subunit processome component protein-coding common_peak2_272_2327_0.131604215965048_11.2506774508908_2.5159738436359 chr11 54521383 54524213 + 2.5159738436359 NA promoter-TSS (NM_175258) promoter-TSS (NM_175258) -47 NM_001252494 192786 Mm.254404 NM_175258 ENSMUSG00000037533 Rapgef6 A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052 Rap guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak1_157_1146_0.185061726283848_10.2561805391577_2.51516366512105 chr7 142060286 142061776 + 2.51516366512105 NA promoter-TSS (NM_028308) promoter-TSS (NM_028308) 3 NM_028308 101513 Mm.53259 NM_028308 ENSMUSG00000025147 Mob2 1110017M21Rik|2700078K21Rik|AI256456|Mmh MOB kinase activator 2 protein-coding common_peak1_91_560_0.25982846585743_9.26177119353751_2.51503922473427 chr12 12261891 12263191 + 2.51503922473427 NA intron (NM_001146119, intron 1 of 11) intron (NM_001146119, intron 1 of 11) 402 NM_001146119 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding common_peak1_37_164_0.46065430033743_7.59664936441453_2.51490682115804 chr5 30678818 30679641 + 2.51490682115804 NA Intergenic MT2B2|LTR|ERVL 12343 NM_001302129 12615 Mm.290563 NM_007681 ENSMUSG00000029177 Cenpa Cenp-A centromere protein A protein-coding common_peak1_82_707_-0.258099680914649_9.33855570962567_2.51468305368845 chr17 56673188 56674051 + 2.51468305368845 NA intron (NR_045519, intron 1 of 16) CpG 394 NM_027933 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding common_peak1_152_1419_-0.179869921111305_10.3817402538364_2.51412156776821 chr11 69093744 69094870 + 2.51412156776821 NA Intergenic Intergenic -4649 NM_011065 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding common_peak2_61_511_-0.306705484079338_8.84664725796033_2.51389439413185 chr17 33950344 33952288 + 2.51389439413185 NA TTS (NM_011296) TTS (NM_011296) 172 NM_019420 54218 Mm.11132 NM_019420 ENSMUSG00000067370 B3galt4 Gal-T2|Galt2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 protein-coding common_peak2_288_2504_0.126673615486029_11.3539316958256_2.51346583555005 chr12 17714043 17719841 + 2.51346583555005 NA intron (NM_016677, intron 1 of 3) MER31B|LTR|ERV1 26128 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak1_19_154_-0.584990177643461_6.98362931645251_2.51335133861252-3 chr9 33728124 33728415 + 2.51335133861252 NA Intergenic CpG -314102 NR_040744 77119 Mm.367930 NR_040744 ENSMUSG00000098758 7630403G23Rik - RIKEN cDNA 7630403G23 gene ncRNA common_peak1_19_154_-0.584990177643461_6.98362931645251_2.51335133861252-2 chr5 86087037 86087427 + 2.51335133861252 NA intron (NM_001310639, intron 4 of 7) intron (NM_001310639, intron 4 of 7) 15486 NM_001310639 56792 Mm.131237 NM_019992 ENSMUSG00000029254 Stap1 AI586015|Brdg1|STAP-1 signal transducing adaptor family member 1 protein-coding common_peak1_19_154_-0.584990177643461_6.98362931645251_2.51335133861252 chr18 84085076 84085527 + 2.51335133861252 NA intron (NM_001081300, intron 1 of 1) GC_rich|Low_complexity|Low_complexity 1261 NM_001081300 110796 Mm.102136 NM_001081300 ENSMUSG00000046982 Tshz1 5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1 teashirt zinc finger family member 1 protein-coding unique_peak2_19_154_-0.584990177643461_6.98362931645251_2.51335133861252 chr12 116145370 116146125 + 2.51335133861252 NA 3' UTR (NM_009511, exon 13 of 13) 3' UTR (NM_009511, exon 13 of 13) 68021 NM_009511 22355 Mm.395245 NM_009511 ENSMUSG00000011171 Vipr2 VPAC2|VPAC2R|Vip2 vasoactive intestinal peptide receptor 2 protein-coding common_peak1_59_313_0.340647994892432_8.46494474633784_2.51291113125672 chr13 41483738 41484800 + 2.51291113125672 NA intron (NM_001111324, intron 1 of 7) intron (NM_001111324, intron 1 of 7) 3091 NM_001111324 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak2_115_1033_-0.212132533429653_9.90795420360011_2.51278591105059 chr5 122353693 122355398 + 2.51278591105059 NA promoter-TSS (NM_144912) promoter-TSS (NM_144912) 132 NM_019780 56433 Mm.216528 NM_019780 ENSMUSG00000029462 Vps29 2010015D08Rik|AW049835|PEP11 VPS29 retromer complex component protein-coding common_peak2_69_584_-0.284234788760877_9.05017542009033_2.51194988765595 chr7 63924259 63926590 + 2.51194988765595 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) 8567 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak1_29_234_-0.467860513967296_7.64258668958135_2.51190400750791 chr10 76032428 76033107 + 2.51190400750791 NA intron (NM_177475, intron 1 of 1) CpG 155 NM_177475 64453 Mm.80609 NM_177475 ENSMUSG00000049764 Zfp280b D10Jhu82e|Suhw2 zinc finger protein 280B protein-coding common_peak1_38_170_0.455090934721962_7.64539798224688_2.51190400750791 chr13 24641540 24642483 + 2.51190400750791 NA intron (NM_001080381, intron 1 of 14) intron (NM_001080381, intron 1 of 14) 3363 NM_029679 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_107_694_0.234563021601437_9.55815067841159_2.51175009665184 chr6 54039147 54040702 + 2.51175009665184 NA promoter-TSS (NM_001163640) promoter-TSS (NM_001163640) -8 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak2_99_626_0.246918181707056_9.41578072365557_2.51074368690301 chr7 44928713 44929694 + 2.51074368690301 NA intron (NM_001077264, intron 1 of 22) CpG 287 NM_007458 11771 Mm.6877 NM_007458 ENSMUSG00000060279 Ap2a1 Adtaa adaptor-related protein complex 2, alpha 1 subunit protein-coding common_peak2_30_122_0.524167699395067_7.20459835503677_2.51048087854883 chr12 26414551 26415384 + 2.51048087854883 NA promoter-TSS (NR_105856) promoter-TSS (NR_105856) 43 NR_105856 102466676 NR_105856 ENSMUSG00000098771 Mir6538 Gm27439|mmu-mir-6538 microRNA 6538 ncRNA common_peak2_103_660_0.240139405505952_9.48857616426067_2.50991231030753 chr2 167804500 167807060 + 2.50991231030753 NA Intergenic Intergenic 114603 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_57_298_0.35127395150082_8.39963864994851_2.50968274218145 chr2 158166661 158167799 + 2.50968274218145 NA Intergenic ID_B1|SINE|B4 -20838 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak2_148_1061_0.192356951303468_10.1487465264559_2.50890706622999 chr7 78719302 78723012 + 2.50890706622999 NA Intergenic PB1D10|SINE|Alu -2937 NR_015542 414121 Mm.482537 NR_015542 ENSMUSG00000059146 E430016F16Rik - RIKEN cDNA E430016F16 gene ncRNA common_peak2_91_794_-0.243125623705495_9.51324823831897_2.5082335910558 chr5 20881216 20883303 + 2.5082335910558 NA promoter-TSS (NM_177601) promoter-TSS (NM_177601) -135 NM_172992 68770 Mm.86410 NM_172992 ENSMUSG00000039987 Phtf2 1110054G21Rik|9530062N20Rik|AI447096|C77923 putative homeodomain transcription factor 2 protein-coding common_peak2_86_745_-0.250233989589384_9.41791482546055_2.50751454433816 chr11 59190765 59192698 + 2.50751454433816 NA intron (NM_008193, intron 1 of 7) CpG 221 NM_008193 14923 Mm.3624 NM_008193 ENSMUSG00000020444 Guk1 AA409738|AL033299|AL033300|AV026611|Gmk|Guk-1 guanylate kinase 1 protein-coding common_peak1_22_78_0.634680055916407_6.62112077613531_2.50735929950938 chr11 100626829 100627190 + 2.50735929950938 NA 3' UTR (NM_028024, exon 4 of 4) 3' UTR (NM_028024, exon 4 of 4) 4054 NM_028024 71966 Mm.274734 NM_028024 ENSMUSG00000017837 Nkiras2 2410003M04Rik|4930527H08Rik|D630018G21Rik|KBRAS2 NFKB inhibitor interacting Ras-like protein 2 protein-coding common_peak2_22_78_0.634680055916407_6.62112077613531_2.50735929950938 chr7 7171159 7171739 + 2.50735929950938 NA promoter-TSS (NM_146179) promoter-TSS (NM_146179) 96 NM_146179 232854 Mm.184857 NM_146179 ENSMUSG00000034538 Zfp418 A230102I05Rik zinc finger protein 418 protein-coding common_peak1_22_78_0.634680055916407_6.62112077613531_2.50735929950938-3 chr9 95280246 95280771 + 2.50735929950938 NA Intergenic B3|SINE|B2 126762 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak1_22_78_0.634680055916407_6.62112077613531_2.50735929950938-2 chr4 87985739 87986198 + 2.50735929950938 NA intron (NM_027326, intron 2 of 10) L1MA9|LINE|L1 47439 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak1_384_3612_0.105845588218944_11.8719043335419_2.50704916322841 chr1 85792908 85795099 + 2.50704916322841 NA intron (NM_133781, intron 1 of 8) CpG 556 NM_133781 12283 Mm.26135 NM_133781 ENSMUSG00000036707 Cab39 AA408805|AA960512|C78372|MO25|MO25alpha calcium binding protein 39 protein-coding common_peak1_36_292_-0.414973203210838_7.98727025281683_2.50695015982056 chr10 42269583 42270265 + 2.50695015982056 NA intron (NM_019740, intron 2 of 3) intron (NM_019740, intron 2 of 3) 6818 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding common_peak2_248_2068_0.138922455461623_11.0841791575908_2.50533816590177 chr9 48813798 48818960 + 2.50533816590177 NA intron (NM_001033324, intron 2 of 6) intron (NM_001033324, intron 2 of 6) 19566 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding common_peak1_26_99_0.57835137706487_6.93303187830716_2.50509033401589 chr10 20854748 20855270 + 2.50509033401589 NA Intergenic Intergenic -97538 NM_026203 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak2_26_99_0.57835137706487_6.93303187830716_2.50509033401589 chr2 166900418 166901166 + 2.50509033401589 NA Intergenic B2_Mm2|SINE|B2 -5304 NM_023565 110750 Mm.22417 NM_023565 ENSMUSG00000002718 Cse1l 2610100P18Rik|AA407533|Capts|Cas|Xpo2 chromosome segregation 1-like (S. cerevisiae) protein-coding common_peak1_68_575_-0.287329681195517_9.02626016084455_2.50489378993136 chr13 21810378 21811136 + 2.50489378993136 NA promoter-TSS (NM_001313878) promoter-TSS (NM_001313878) 290 NM_178185 319171 Mm.250564 NM_178185 ENSMUSG00000094777 Hist1h2ap ENSMUSG00000060262|Gm11276|OTTMUSG00000000448 histone cluster 1, H2ap protein-coding common_peak2_80_472_0.280645709653484_9.02601922816614_2.50489378993136 chr4 63558005 63559539 + 2.50489378993136 NA Intergenic CpG -1588 NM_144905 230279 Mm.41523 NM_144905 ENSMUSG00000045917 Tmem268 6330416G13Rik|AW492431|bM230C2.2 transmembrane protein 268 protein-coding common_peak1_142_1006_0.196342378575643_10.0740191572946_2.50479012602969 chr5 112342479 112343971 + 2.50479012602969 NA promoter-TSS (NM_027323) promoter-TSS (NM_027323) 130 NM_138646 192232 Mm.238043 NM_138646 ENSMUSG00000042328 Hps4 2010205O06Rik|AU040608|BLOC-3|C130020P05Rik|le|mKIAA1667 Hermansky-Pudlak syndrome 4 protein-coding common_peak2_265_2699_-0.128231068089477_11.3346281578935_2.50477277740301 chr11 5174677 5179404 + 2.50477277740301 NA Intergenic Intergenic -24818 NM_080595 140703 Mm.840 NM_080595 ENSMUSG00000034164 Emid1 AW122071|CO-5|Emu1 EMI domain containing 1 protein-coding common_peak1_17_53_0.749797859709199_6.12978643201807_2.50453829962263-2 chr2 79006310 79006779 + 2.50453829962263 NA Intergenic Intergenic 137497 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_17_53_0.749797859709199_6.12978643201807_2.50453829962263 chr2 35728963 35729416 + 2.50453829962263 NA 3' UTR (NM_001001602, exon 14 of 14) 3' UTR (NM_001001602, exon 14 of 14) 32457 NM_001290639 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_17_53_0.749797859709199_6.12978643201807_2.50453829962263-4 chr7 81004956 81005368 + 2.50453829962263 NA intron (NM_178707, intron 1 of 9) intron (NM_178707, intron 1 of 9) 11478 NM_178707 233410 Mm.29525 NM_178707 ENSMUSG00000005621 Zfp592 8430405N24|A730014M16Rik|Znf592|mKIAA0211 zinc finger protein 592 protein-coding common_peak1_17_53_0.749797859709199_6.12978643201807_2.50453829962263-3 chr2 167374782 167375184 + 2.50453829962263 NA Intergenic Intergenic -25805 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding unique_peak1_17_53_0.749797859709199_6.12978643201807_2.50453829962263 chr15 79934903 79935357 + 2.50453829962263 NA Intergenic Intergenic -2484 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak2_164_1213_0.17987282828352_10.3354891203974_2.50448427647435 chr11 109423916 109427091 + 2.50448427647435 NA promoter-TSS (NM_025275) promoter-TSS (NM_025275) -443 NM_025275 13929 Mm.211850 NM_025275 ENSMUSG00000020610 Amz2 AA408420|ESTM12|X83328 archaelysin family metallopeptidase 2 protein-coding common_peak2_235_1930_0.143618578463888_10.9869417381826_2.50436432484318 chr8 34153680 34156474 + 2.50436432484318 NA intron (NM_026432, intron 1 of 5) intron (NM_026432, intron 1 of 5) 514 NM_026432 67887 Mm.290353 NM_026432 ENSMUSG00000031532 Saraf 1810045K07Rik|Tmem66 store-operated calcium entry-associated regulatory factor protein-coding common_peak2_224_1815_0.147735737152038_10.9004163558669_2.50405926336698 chr11 83222923 83225629 + 2.50405926336698 NA non-coding (NR_015519, exon 2 of 4) non-coding (NR_015519, exon 2 of 4) 700 NR_015519 100043636 Mm.295569 NR_015519 ENSMUSG00000087107 AI662270 AW496474 expressed sequence AI662270 ncRNA common_peak1_167_1580_-0.169310075000803_10.541966614858_2.50400239815712 chr7 30649397 30651001 + 2.50400239815712 NA promoter-TSS (NM_133693) promoter-TSS (NM_133693) 29 NM_133693 68035 Mm.401747 NM_133693 ENSMUSG00000036733 Rbm42 1700003D06Rik|3100004P22Rik RNA binding motif protein 42 protein-coding common_peak1_67_372_0.313729063091646_8.69989635180106_2.50397504526514-2 chr7 98059735 98060438 + 2.50397504526514 NA intron (NM_001256081, intron 39 of 48) (AATAG)n|Simple_repeat|Simple_repeat 49162 NM_001256082 17921 Mm.1403 NM_008663 ENSMUSG00000030761 Myo7a Hdb|Myo7|USH1B|nmf371|polka|sh-1|sh1 myosin VIIA protein-coding common_peak1_67_372_0.313729063091646_8.69989635180106_2.50397504526514 chr7 68748579 68749353 + 2.50397504526514 NA exon (NM_001042592, exon 1 of 8) exon (NM_001042592, exon 1 of 8) 272 NM_001042592 66412 Mm.251199 NM_025549 ENSMUSG00000042659 Arrdc4 2410003C09Rik|AV216361 arrestin domain containing 4 protein-coding common_peak1_281_2427_0.128325208509976_11.3097153105107_2.50396355716341 chr9 45249211 45253811 + 2.50396355716341 NA Intergenic Intergenic 15196 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak2_285_2471_0.127339629864409_11.3351328428366_2.50391987254069 chr1 64755248 64759058 + 2.50391987254069 NA Intergenic Intergenic -19403 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_37_300_-0.406643162176455_8.03029809567147_2.50388949230741 chr19 46075831 46076471 + 2.50388949230741 NA intron (NM_053086, intron 1 of 12) CpG 304 NM_001039351 70769 Mm.402190 NM_053086 ENSMUSG00000015176 Nolc1 NOPP130|NOPP140|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding common_peak2_37_300_-0.406643162176455_8.03029809567147_2.50388949230741 chr4 88781849 88782841 + 2.50388949230741 NA 5' UTR (NM_197889, exon 1 of 1) 5' UTR (NM_197889, exon 1 of 1) 214 NM_197889 319146 Mm.368232 NM_197889 ENSMUSG00000096854 Ifnz 6030405N23Rik|BGIF|ENSMUSG00000073810|Lmtn interferon zeta protein-coding common_peak1_25_202_-0.509914672544244_7.41037858091305_2.50282068517972-2 chr14 60129580 60130274 + 2.50282068517972 NA Intergenic Intergenic -43093 NM_015803 50769 Mm.319599 NM_015803 ENSMUSG00000021983 Atp8a2 AI415030|Atpc1b|agil|wl ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 protein-coding common_peak1_25_202_-0.509914672544244_7.41037858091305_2.50282068517972 chr1 86434598 86435088 + 2.50282068517972 NA Intergenic CpG 8514 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 1700019O17Rik - RIKEN cDNA 1700019O17 gene protein-coding common_peak2_127_1155_-0.198835485816442_10.0755079395925_2.5027482996282 chr17 79347161 79349987 + 2.5027482996282 NA intron (NM_026514, intron 1 of 1) MT2B1|LTR|ERVL 6517 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak2_127_1155_-0.198835485816442_10.0755079395925_2.5027482996282-2 chr7 16098193 16099846 + 2.5027482996282 NA intron (NM_025898, intron 1 of 10) CpG 376 NM_025898 108124 Mm.104540 NM_025898 ENSMUSG00000006024 Napa 1500039N14Rik|AW209189|RA81|SNAPA|SNARE|a-SNAP|hyh N-ethylmaleimide sensitive fusion protein attachment protein alpha protein-coding common_peak1_120_807_0.218355361883653_9.76738916369362_2.50185231988656 chr4 135204740 135206447 + 2.50185231988656 NA Intergenic GA-rich|Low_complexity|Low_complexity 67167 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak1_38_308_-0.398519578296514_8.07220323875612_2.50180565784625 chr4 43025090 43025820 + 2.50180565784625 NA 5' UTR (NM_020035, exon 1 of 10) 5' UTR (NM_020035, exon 1 of 10) 319 NM_020035 56703 Mm.143738 NM_020035 ENSMUSG00000028454 Pigo PIG-O phosphatidylinositol glycan anchor biosynthesis, class O protein-coding common_peak2_150_1080_0.190369577250902_10.1733355963601_2.50030073645317 chr6 146079411 146082197 + 2.50030073645317 NA Intergenic G-rich|Low_complexity|Low_complexity 146657 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_252_2545_-0.132174486679995_11.2479294605614_2.50020772761236 chr9 13465645 13467556 + 2.50020772761236 NA Intergenic Intergenic 35239 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA common_peak1_179_1359_0.170012323799641_10.4943970980375_2.50016993140686 chr16 91451095 91453597 + 2.50016993140686 NA Intergenic Intergenic -12758 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak1_352_3234_0.111717213780093_11.7154086037699_2.49987061034982 chr11 59226575 59229004 + 2.49987061034982 NA intron (NM_007476, intron 1 of 4) CpG 373 NM_001130408 11840 Mm.371546 NM_007476 ENSMUSG00000048076 Arf1 - ADP-ribosylation factor 1 protein-coding common_peak1_73_417_0.299036830316883_8.85687754723932_2.49958105282907 chr12 110436469 110437679 + 2.49958105282907 NA Intergenic MER20|DNA|hAT-Charlie -10105 NM_001135001 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_30_242_-0.458130298871475_7.69574735417004_2.49950926929849 chr7 125511608 125512277 + 2.49950926929849 NA Intergenic MLT1A0|LTR|ERVL-MaLR -20400 NM_026330 67711 Mm.4467 NM_026330 ENSMUSG00000030750 Nsmce1 2510027N19Rik NSE1 homolog, SMC5-SMC6 complex component protein-coding common_peak2_30_242_-0.458130298871475_7.69574735417004_2.49950926929849 chr12 106009656 106011093 + 2.49950926929849 NA intron (NM_011705, intron 1 of 14) CpG 111 NM_001029843 22367 Mm.2981 NM_011705 ENSMUSG00000021115 Vrk1 51PK vaccinia related kinase 1 protein-coding common_peak1_80_688_-0.262018089711413_9.29735112784859_2.49933897045885 chr5 107702675 107704507 + 2.49933897045885 NA promoter-TSS (NR_045871) promoter-TSS (NR_045871) -111 NR_045871 654809 Mm.399159 NR_045871 ENSMUSG00000106333 4930428O21Rik - RIKEN cDNA 4930428O21 gene ncRNA common_peak1_80_688_-0.262018089711413_9.29735112784859_2.49933897045885-2 chr9 106891241 106892050 + 2.49933897045885 NA intron (NM_029103, intron 1 of 3) CpG 293 NM_029103 74840 Mm.29778 NM_029103 ENSMUSG00000032575 Manf 3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17 mesencephalic astrocyte-derived neurotrophic factor protein-coding common_peak1_106_941_-0.220612830257011_9.76927683448428_2.49933078467542 chr4 138217173 138218105 + 2.49933078467542 NA intron (NM_001122897, intron 1 of 12) CpG 512 NM_001122897 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding unique_peak2_13_109_-0.72140727469309_6.42065607617812_2.49857975371767 chr7 106054246 106055165 + 2.49857975371767 NA Intergenic Intergenic 23159 NR_030720 668128 Mm.484022 NR_030720 Gm8989 EG668128|Gm21911 very large inducible GTPase 1 pseudogene pseudo common_peak1_374_3494_0.107178554905188_11.8246660177154_2.49847001002143 chr2 92182932 92186333 + 2.49847001002143 NA promoter-TSS (NM_001109691) promoter-TSS (NM_001109691) 450 NM_138755 192285 Mm.330408 NM_138755 ENSMUSG00000058318 Phf21a 80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1 PHD finger protein 21A protein-coding common_peak2_262_2219_0.134097058037993_11.1833924902565_2.49844204060771 chrX 140540141 140544504 + 2.49844204060771 NA intron (NM_001077364, intron 2 of 3) intron (NM_001077364, intron 2 of 3) 346 NR_122039 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding unique_peak2_10_87_-0.826246187129701_6.04630852507245_2.4980968958224-2 chr12 34989781 34990492 + 2.4980968958224 NA Intergenic ORR1F|LTR|ERVL-MaLR 5375 NM_029294 75456 Mm.79179 NM_029294 ENSMUSG00000092305 Prps1l1 1700011K15Rik phosphoribosyl pyrophosphate synthetase 1-like 1 protein-coding unique_peak2_10_87_-0.826246187129701_6.04630852507245_2.4980968958224 chr1 80729272 80729926 + 2.4980968958224 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 28954 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding unique_peak2_10_87_-0.826246187129701_6.04630852507245_2.4980968958224-3 chr14 100459378 100460137 + 2.4980968958224 NA Intergenic Intergenic -309961 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding unique_peak2_10_87_-0.826246187129701_6.04630852507245_2.4980968958224-4 chr2 28467970 28468647 + 2.4980968958224 NA exon (NM_080452, exon 2 of 4) exon (NM_080452, exon 2 of 4) 242 NM_001166031 118451 Mm.294951 NM_080452 ENSMUSG00000035772 Mrps2 1500019M10Rik mitochondrial ribosomal protein S2 protein-coding common_peak1_94_823_-0.238030736908007_9.56748515872922_2.49719261678117 chr5 21056200 21057016 + 2.49719261678117 NA promoter-TSS (NM_011203) promoter-TSS (NM_011203) -811 NM_011203 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak2_98_862_-0.231762285364791_9.63733560649656_2.49643936566989 chr1 86582108 86583221 + 2.49643936566989 NA promoter-TSS (NM_008801) promoter-TSS (NM_008801) -163 NM_008801 18582 Mm.12925 NM_008801 ENSMUSG00000026239 Pde6d AI841218|PrBP/delta phosphodiesterase 6D, cGMP-specific, rod, delta protein-coding common_peak2_219_2161_-0.143635166976022_11.0063332242466_2.49639167000303 chr7 19227080 19229679 + 2.49639167000303 NA promoter-TSS (NM_207525) promoter-TSS (NM_207525) -10 NM_207525 403187 Mm.239583 NM_207525 ENSMUSG00000052214 Opa3 D630048P19Rik|Gm1425|Gm472 optic atrophy 3 protein-coding common_peak1_53_270_0.36667083667208_8.26548445968991_2.49637589989564 chr15 100673206 100674421 + 2.49637589989564 NA TTS (NM_033612) TTS (NM_033612) -4313 NM_001270537 668218 Mm.451225 NM_001270537 ENSMUSG00000098112 Bin2 - bridging integrator 2 protein-coding common_peak2_53_270_0.36667083667208_8.26548445968991_2.49637589989564 chr15 5693866 5695249 + 2.49637589989564 NA Intergenic Intergenic 198239 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_270_2306_0.131665244664424_11.2376349110152_2.4962270878153 chr3 61408276 61411507 + 2.4962270878153 NA Intergenic Intergenic 45384 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding unique_peak2_22_178_-0.545354973170746_7.21113829067888_2.49563263480452-2 chr7 118294339 118295752 + 2.49563263480452 NA Intergenic Intergenic 51138 NR_027879 67745 Mm.483404 NM_183267 ENSMUSG00000055159 4930583K01Rik - RIKEN cDNA 4930583K01 gene ncRNA unique_peak2_22_178_-0.545354973170746_7.21113829067888_2.49563263480452 chr15 62189038 62190406 + 2.49563263480452 NA intron (NR_132746, intron 3 of 6) intron (NR_132746, intron 3 of 6) 29729 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak2_31_128_0.51163831888827_7.26704641486739_2.49551085775382 chr1 106617315 106617998 + 2.49551085775382 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -71025 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_31_128_0.51163831888827_7.26704641486739_2.49551085775382-2 chr19 44314135 44314860 + 2.49551085775382 NA Intergenic Intergenic 11326 NR_039574 100628619 NR_039574 ENSMUSG00000093315 Mir5114 mmu-mir-5114|mu-mir-5114 microRNA 5114 ncRNA common_peak2_264_2687_-0.128470070457325_11.3280823875501_2.49533203165066 chr15 66795237 66803295 + 2.49533203165066 NA intron (NM_001029841, intron 2 of 7) MIR|SINE|MIR 32563 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_144_1025_0.193953885783836_10.099791958499_2.49501889716168 chr7 44495493 44497241 + 2.49501889716168 NA promoter-TSS (NM_028169) promoter-TSS (NM_028169) 146 NM_197991 69683 Mm.294759 NM_197991 ENSMUSG00000008140 Emc10 2310044H10Rik|5430410O10Rik|Inm02|Mirta22 ER membrane protein complex subunit 10 protein-coding common_peak1_26_209_-0.492037950826528_7.46822654225286_2.49497269550129-2 chr7 19870954 19871478 + 2.49497269550129 NA Intergenic Intergenic -9917 NM_001033419 330483 Mm.260192 NM_001033419 ENSMUSG00000014686 Ceacam16 Gm769 carcinoembryonic antigen-related cell adhesion molecule 16 protein-coding unique_peak2_26_209_-0.492037950826528_7.46822654225286_2.49497269550129-2 chr2 32084141 32085633 + 2.49497269550129 NA Intergenic Intergenic -1182 NM_175511 241303 Mm.250441 NM_175511 ENSMUSG00000050592 Fam78a A130092J06Rik family with sequence similarity 78, member A protein-coding unique_peak2_26_209_-0.492037950826528_7.46822654225286_2.49497269550129 chr13 97205041 97206240 + 2.49497269550129 NA Intergenic Intergenic -7283 NM_010422 15212 Mm.27816 NM_010422 ENSMUSG00000021665 Hexb - hexosaminidase B protein-coding common_peak1_26_209_-0.492037950826528_7.46822654225286_2.49497269550129 chr2 29827341 29827782 + 2.49497269550129 NA intron (NM_026615, intron 1 of 4) CpG 172 NM_026615 68205 Mm.20273 NM_026615 ENSMUSG00000069020 Urm1 2900073H19Rik ubiquitin related modifier 1 protein-coding common_peak1_73_621_-0.274374807732837_9.14358336626418_2.49469911193488 chr17 26138548 26139546 + 2.49469911193488 NA intron (NM_009733, intron 1 of 10) CpG 361 NM_001159598 12005 Mm.23684 NM_009733 ENSMUSG00000024182 Axin1 AI316800|Axin|Fu|Kb|Ki|fused|kinky|knobbly axin 1 protein-coding common_peak1_15_44_0.804400166795493_5.89405317972742_2.49384873262486-2 chr13 12565474 12565787 + 2.49384873262486 NA promoter-TSS (NM_026184) promoter-TSS (NM_026184) -253 NM_026184 67475 Mm.358706 NM_026184 ENSMUSG00000057069 Ero1lb 1300013B24Rik|1700065B09Rik|AI447560|Ero1b|ero1-beta ERO1-like beta (S. cerevisiae) protein-coding common_peak1_15_44_0.804400166795493_5.89405317972742_2.49384873262486-3 chr13 51790774 51791176 + 2.49384873262486 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 2772 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_15_44_0.804400166795493_5.89405317972742_2.49384873262486 chr10 108168898 108169301 + 2.49384873262486 NA intron (NM_027892, intron 1 of 25) intron (NM_027892, intron 1 of 25) 6699 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak1_15_44_0.804400166795493_5.89405317972742_2.49384873262486-4 chr15 97359219 97359702 + 2.49384873262486 NA intron (NM_172293, intron 3 of 5) B1_Mus1|SINE|Alu -112173 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak2_129_888_0.207487222689483_9.89978322017451_2.49382042460215 chr3 52101580 52105260 + 2.49382042460215 NA intron (NM_001004176, intron 1 of 4) CpG 1586 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like 3 (Drosophila) protein-coding common_peak2_286_2483_0.126529916110414_11.3417144162757_2.49373628778574 chr4 135202290 135207231 + 2.49373628778574 NA Intergenic Intergenic 68000 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak2_65_357_0.32011648158298_8.64387401805575_2.49329930777846 chr7 24457005 24458797 + 2.49329930777846 NA Intergenic Intergenic -4599 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding common_peak1_109_971_-0.216909174033509_9.81635791658903_2.49317066256453 chr10 19691944 19693271 + 2.49317066256453 NA Intergenic Intergenic -19980 NM_172786 237313 Mm.234667 NM_172786 ENSMUSG00000020007 Il20ra E230031K19 interleukin 20 receptor, alpha protein-coding common_peak2_198_1923_-0.152911289922624_10.8334374388087_2.49276605239437 chr2 164520406 164523342 + 2.49276605239437 NA Intergenic MER21C|LTR|ERVL 24349 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak1_39_317_-0.395136416467222_8.11531474705074_2.49270165361046 chr2 25461171 25461724 + 2.49270165361046 NA promoter-TSS (NM_153557) promoter-TSS (NM_153557) -353 NM_153557 227622 Mm.261780 NM_153557 ENSMUSG00000047617 BC029214 D930050G13Rik|Paxx cDNA sequence BC029214 protein-coding common_peak1_40_325_-0.387284889165652_8.15508570964825_2.49255101532489 chr11 116253937 116254659 + 2.49255101532489 NA intron (NM_146032, intron 9 of 15) intron (NM_146032, intron 9 of 15) -16207 NM_025276 14027 Mm.293683 NM_025276 ENSMUSG00000034282 Evpl - envoplakin protein-coding common_peak2_181_1733_-0.160930829315431_10.6794227685641_2.49240384702573 chr5 144767632 144769321 + 2.49240384702573 NA promoter-TSS (NM_001081362) promoter-TSS (NM_001081362) -316 NM_001081362 100683 Mm.273570 NM_001081362 ENSMUSG00000045482 Trrap AI481500 transformation/transcription domain-associated protein protein-coding unique_peak2_17_139_-0.624597655072299_6.81698418940882_2.49235065087197 chr13 43456127 43457397 + 2.49235065087197 NA intron (NM_019930, intron 2 of 13) intron (NM_019930, intron 2 of 13) 24211 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding unique_peak2_17_139_-0.624597655072299_6.81698418940882_2.49235065087197-2 chr8 108886672 108887393 + 2.49235065087197 NA intron (NM_007496, intron 4 of 9) intron (NM_007496, intron 4 of 9) -49828 NR_037295 100526511 NR_037295 ENSMUSG00000093241 Mir3108 mir-3108|mmu-mir-3108 microRNA 3108 ncRNA common_peak1_17_139_-0.624597655072299_6.81698418940882_2.49235065087197 chr5 123228231 123228691 + 2.49235065087197 NA intron (NM_026000, intron 1 of 5) CpG 271 NM_026000 67151 Mm.278997 NM_026000 ENSMUSG00000029440 Psmd9 1500011J20Rik|2610202L11Rik|Bridge-1|P27 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 protein-coding common_peak2_234_2334_-0.137970160292689_11.1202217544507_2.4920422713644 chr11 50130504 50133337 + 2.4920422713644 NA intron (NM_001290759, intron 1 of 21) intron (NM_001290759, intron 1 of 21) 560 NM_029745 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding common_peak1_42_196_0.423675350797574_7.83388949485516_2.49185210707594 chr6 108525758 108526778 + 2.49185210707594 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 36525 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_168_1252_0.17664314920755_10.3794922739256_2.491463174481 chr4 155830794 155832468 + 2.491463174481 NA 5' UTR (NM_025338, exon 1 of 4) 5' UTR (NM_025338, exon 1 of 4) 362 NM_025338 66077 Mm.28999 NM_025338 ENSMUSG00000065990 Aurkaip1 0610033H09Rik|Aip|Akip|MRP-S38 aurora kinase A interacting protein 1 protein-coding common_peak1_78_456_0.286048736055246_8.97907472308569_2.49135942006234 chr6 34176372 34177287 + 2.49135942006234 NA exon (NM_021435, exon 1 of 10) exon (NM_021435, exon 1 of 10) 225 NM_021435 58246 Mm.245527 NM_021435 ENSMUSG00000018999 Slc35b4 4930474D06Rik|AB041549|AW494345 solute carrier family 35, member B4 protein-coding common_peak2_155_1450_-0.176663732086171_10.4144999380237_2.49100488091124 chr11 58300433 58303327 + 2.49100488091124 NA Intergenic Intergenic -5189 NM_182996 103836 Mm.41440 NM_182996 ENSMUSG00000037243 Zfp692 AI746306|AI839920|Zfp692-ps|Znf692 zinc finger protein 692 protein-coding common_peak1_101_891_-0.226616811606492_9.68759149411706_2.48930833225319 chr13 23620330 23621272 + 2.48930833225319 NA TTS (NM_015787) TTS (NM_015787) 293 NM_001177653 319179 Mm.440391 NM_178194 ENSMUSG00000047246 Hist1h2be - histone cluster 1, H2be protein-coding common_peak1_259_2187_0.134742119913051_11.1627680827491_2.48915520685946 chr1 92830521 92833739 + 2.48915520685946 NA intron (NM_016696, intron 1 of 8) CpG 444 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak1_83_496_0.273597224608924_9.09390065386675_2.48673400237784 chr16 57230718 57231589 + 2.48673400237784 NA intron (NM_026254, intron 1 of 17) intron (NM_026254, intron 1 of 17) 313 NM_026254 67581 Mm.257819 NM_026254 ENSMUSG00000022749 Tbc1d23 4930451A13Rik|AU015720|AU043671|AU043778|D030022P07Rik|W51689 TBC1 domain family, member 23 protein-coding common_peak1_23_83_0.621458045313334_6.70304644543543_2.48574085534999 chr10 7667067 7667487 + 2.48574085534999 NA promoter-TSS (NM_145706) promoter-TSS (NM_145706) -227 NM_145706 69912 Mm.299887 NM_145706 ENSMUSG00000040034 Nup43 2610016K01Rik|2610529I12Rik|AA409950|p42 nucleoporin 43 protein-coding unique_peak1_23_83_0.621458045313334_6.70304644543543_2.48574085534999 chr2 116972278 116972926 + 2.48574085534999 NA Intergenic Intergenic 72450 NR_040335 320975 Mm.132509 NR_040335 ENSMUSG00000085316 D330050G23Rik - RIKEN cDNA D330050G23 gene ncRNA common_peak2_23_83_0.621458045313334_6.70304644543543_2.48574085534999-2 chr2 84826875 84827545 + 2.48574085534999 NA intron (NM_013899, intron 1 of 2) intron (NM_013899, intron 1 of 2) 189 NM_013899 30059 Mm.21826 NM_013899 ENSMUSG00000027076 Timm10 Tim13|Timm13a translocase of inner mitochondrial membrane 10 protein-coding common_peak2_23_83_0.621458045313334_6.70304644543543_2.48574085534999 chr12 86897244 86897838 + 2.48574085534999 NA Intergenic Intergenic -12727 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_41_334_-0.383930330360281_8.196052120165_2.48568884346016 chr7 27507554 27508199 + 2.48568884346016 NA intron (NM_198048, intron 4 of 6) CpG 8552 NM_019412 19153 Mm.10119 NM_019412 ENSMUSG00000053198 Prx L-Periaxin periaxin protein-coding common_peak2_48_236_0.388132988012425_8.08280974290447_2.48558250098089 chr1 95660706 95662300 + 2.48558250098089 NA intron (NM_001159745, intron 1 of 3) intron (NM_001159745, intron 1 of 3) 6091 NM_009183 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak1_48_236_0.388132988012425_8.08280974290447_2.48558250098089 chr12 100168211 100168825 + 2.48558250098089 NA Intergenic ID4_|SINE|ID -8865 NM_183155 217827 Mm.224076 NM_183155 ENSMUSG00000021179 Nrde2 6720454P05Rik nrde-2 necessary for RNA interference, domain containing protein-coding common_peak1_15_124_-0.669531021536919_6.63101877389363_2.48525259113198 chr19 11446854 11447262 + 2.48525259113198 NA intron (NM_021718, intron 1 of 6) intron (NM_021718, intron 1 of 6) 3500 NM_021718 60361 Mm.33957 NM_021718 ENSMUSG00000056290 Ms4a4b AI463180|Chandra|Ly116 membrane-spanning 4-domains, subfamily A, member 4B protein-coding unique_peak2_15_124_-0.669531021536919_6.63101877389363_2.48525259113198 chr12 51886288 51887111 + 2.48525259113198 NA intron (NM_177171, intron 32 of 35) intron (NM_177171, intron 32 of 35) -57163 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak1_43_203_0.413984711908812_7.8794176979259_2.4852509579276-2 chr8 11452129 11452794 + 2.4852509579276 NA Intergenic Intergenic -25468 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak1_43_203_0.413984711908812_7.8794176979259_2.4852509579276 chr6 54158574 54159325 + 2.4852509579276 NA intron (NM_001163640, intron 1 of 12) MLT2B3|LTR|ERVL -105909 NM_001311133 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak1_50_250_0.376127223176685_8.15960716553911_2.48489683650448 chr11 53841719 53842600 + 2.48489683650448 NA intron (NR_033332, intron 2 of 3) MIRb|SINE|MIR 17097 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA common_peak2_50_250_0.376127223176685_8.15960716553911_2.48489683650448 chr10 78464297 78465858 + 2.48489683650448 NA promoter-TSS (NM_172134) promoter-TSS (NM_172134) -129 NM_172134 216134 Mm.206159 NM_172134 ENSMUSG00000032788 Pdxk 2310036D04Rik|AA119688|C77999 pyridoxal (pyridoxine, vitamin B6) kinase protein-coding common_peak1_83_716_-0.255130042530693_9.35826428743656_2.48435030652899 chr2 70661435 70662379 + 2.48435030652899 NA intron (NM_027352, intron 1 of 9) CpG 398 NM_027352 70231 Mm.271950 NM_027352 ENSMUSG00000014959 Gorasp2 0610011A07Rik|2410043M02Rik|5730520M13Rik|9430094F20Rik|AW552058|ENSMUSG00000075299|GOLPH2|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding common_peak2_281_2428_0.127731140129793_11.3100123447008_2.48416085912437 chr3 145923347 145925786 + 2.48416085912437 NA intron (NM_009740, intron 1 of 2) CpG 304 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak1_128_879_0.208501972882573_9.88561069996595_2.4840527149674 chr2 164745680 164747131 + 2.4840527149674 NA intron (NM_133763, intron 1 of 12) MIRb|SINE|MIR 390 NM_133763 76233 Mm.440009 NM_133763 ENSMUSG00000017299 Dnttip1 6430706C13Rik deoxynucleotidyltransferase, terminal, interacting protein 1 protein-coding common_peak1_128_879_0.208501972882573_9.88561069996595_2.4840527149674-2 chr7 140940891 140942771 + 2.4840527149674 NA intron (NM_145387, intron 1 of 13) intron (NM_145387, intron 1 of 13) 250 NM_145387 212974 Mm.260139 NM_145387 ENSMUSG00000062031 Pgghg 5730511L01Rik|Athl1|BC023151 protein glucosylgalactosylhydroxylysine glucosidase protein-coding common_peak2_140_988_0.197438892820193_10.0485461571692_2.48405047710695 chr13 94357976 94359707 + 2.48405047710695 NA promoter-TSS (NM_009680) promoter-TSS (NM_009680) 82 NR_045619 328309 Mm.174191 NM_183205 Gm9776 A530089L17|ENSMUSG00000042857 predicted gene 9776 ncRNA common_peak1_125_1134_-0.200255111040139_10.0483490266582_2.48405047710656 chr8 116921132 116922426 + 2.48405047710656 NA promoter-TSS (NM_028131) promoter-TSS (NM_028131) 39 NM_028131 72155 Mm.23185 NM_028131 ENSMUSG00000031756 Cenpn 2610510J17Rik|AI426416|AW545024 centromere protein N protein-coding common_peak1_291_3011_-0.120962405913588_11.4960248517151_2.48331412903954 chr3 102994908 102997641 + 2.48331412903954 NA intron (NM_025679, intron 2 of 4) (TG)n|Simple_repeat|Simple_repeat 534 NM_025679 66641 Mm.33937 NM_025679 ENSMUSG00000027854 Sike1 2810005O12Rik|5730470L24Rik|AI450236|AI839862|Sike|Sikeb suppressor of IKBKE 1 protein-coding common_peak1_131_906_0.205585829505068_9.92775165528106_2.48327502516783 chr2 91069545 91071234 + 2.48327502516783 NA promoter-TSS (NM_026721) promoter-TSS (NM_026721) -74 NM_001290765 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding unique_peak2_32_134_0.500504350610049_7.32706777235586_2.48310239352393 chr1 61422209 61423446 + 2.48310239352393 NA Intergenic Intergenic 44395 NR_040483 77341 Mm.402964 NR_040483 ENSMUSG00000085447 9530026F06Rik - RIKEN cDNA 9530026F06 gene ncRNA common_peak1_32_134_0.500504350610049_7.32706777235586_2.48310239352393 chr1 74600910 74601454 + 2.48310239352393 NA promoter-TSS (NM_175031) promoter-TSS (NM_175031) 215 NM_021313 57751 Mm.280920 NM_021313 ENSMUSG00000026171 Rnf25 0610009H16Rik|AO7 ring finger protein 25 protein-coding common_peak1_32_134_0.500504350610049_7.32706777235586_2.48310239352393-2 chr2 33130143 33130956 + 2.48310239352393 NA Intergenic CpG -43345 NM_178888 99326 Mm.41290 NM_178888 ENSMUSG00000038860 Garnl3 AW120551 GTPase activating RANGAP domain-like 3 protein-coding common_peak2_32_134_0.500504350610049_7.32706777235586_2.48310239352393 chr11 102189542 102190490 + 2.48310239352393 NA exon (NM_175935, exon 1 of 6) exon (NM_175935, exon 1 of 6) 317 NM_175935 68401 Mm.22385 NM_175935 ENSMUSG00000034793 G6pc3 0710001K01Rik|AU019276|AU045429|AV128920|AW545836|UGRP glucose 6 phosphatase, catalytic, 3 protein-coding common_peak2_248_2497_-0.132917376286326_11.2200990734648_2.48286310034965 chr17 46159537 46164123 + 2.48286310034965 NA intron (NM_019581, intron 1 of 11) intron (NM_019581, intron 1 of 11) 798 NM_001145979 56055 Mm.22147 NM_019581 ENSMUSG00000023952 Gtpbp2 nmf205 GTP binding protein 2 protein-coding common_peak2_51_421_-0.339065632879898_8.55156637226724_2.4828105038115 chr4 117886736 117887722 + 2.4828105038115 NA promoter-TSS (NM_033617) promoter-TSS (NM_033617) 100 NM_033617 114143 Mm.207052 NM_033617 ENSMUSG00000033379 Atp6v0b 2310024H13Rik|Atp6f|VMA16 ATPase, H+ transporting, lysosomal V0 subunit B protein-coding common_peak2_71_602_-0.278104207654705_9.09696208807273_2.48274419464011 chr19 4168961 4170573 + 2.48274419464011 NA exon (NM_134148, exon 9 of 10) exon (NM_134148, exon 9 of 10) 5712 NM_134148 107239 Mm.482310 NM_134148 ENSMUSG00000075289 Carns1 AI790298|Atpgd1|mKIAA1394 carnosine synthase 1 protein-coding common_peak1_48_394_-0.348832606153781_8.45129253998758_2.48263139496065 chr13 97197828 97198595 + 2.48263139496065 NA exon (NM_010422, exon 1 of 14) exon (NM_010422, exon 1 of 14) 146 NM_010422 15212 Mm.27816 NM_010422 ENSMUSG00000021665 Hexb - hexosaminidase B protein-coding common_peak2_50_412_-0.34232719429199_8.51883437427345_2.48216239807701 chr11 72206386 72208127 + 2.48216239807701 NA promoter-TSS (NM_026559) promoter-TSS (NM_026559) -298 NM_026559 52700 Mm.27670 NM_026559 ENSMUSG00000020803 Txndc17 4831443O22Rik|D11Ertd672e|TRP14|Txnl5 thioredoxin domain containing 17 protein-coding unique_peak2_49_403_-0.345583979429055_8.48541949303727_2.48208875660274 chr17 5162732 5164702 + 2.48208875660274 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 168643 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_49_403_-0.345583979429055_8.48541949303727_2.48208875660274 chr3 103396787 103398626 + 2.48208875660274 NA Intergenic Intergenic 118413 NM_001079830 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding common_peak1_45_368_-0.362403890780531_8.34627506067013_2.48172729546418 chr4 98436684 98437407 + 2.48172729546418 NA intron (NM_172696, intron 11 of 43) intron (NM_172696, intron 11 of 43) 41219 NM_172696 12695 Mm.90218 NM_007704 ENSMUSG00000061859 Patj Cipp|Inadl PATJ, crumbs cell polarity complex component protein-coding common_peak1_415_3987_0.10042079498816_12.0116600918923_2.48145968449621 chr17 87281728 87283931 + 2.48145968449621 NA promoter-TSS (NM_028639) promoter-TSS (NM_028639) -15 NR_015506 74597 Mm.63783 NR_015506 ENSMUSG00000085287 4833418N02Rik - RIKEN cDNA 4833418N02 gene ncRNA common_peak1_23_185_-0.525383343015936_7.27646713960006_2.4813815223253 chr14 106210807 106211205 + 2.4813815223253 NA Intergenic Intergenic 104808 NR_073203 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_23_185_-0.525383343015936_7.27646713960006_2.4813815223253-2 chr8 124321085 124321640 + 2.4813815223253 NA intron (NM_139272, intron 3 of 15) intron (NM_139272, intron 3 of 15) 89968 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_32_258_-0.439488340025675_7.79706411767372_2.48014822112881 chr19 57079582 57080260 + 2.48014822112881 NA intron (NM_001290813, intron 7 of 20) intron (NM_001290813, intron 7 of 20) 39103 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_87_528_0.265898452952637_9.18007313859034_2.48011251343827 chr7 90312079 90313760 + 2.48011251343827 NA intron (NM_001289583, intron 1 of 19) intron (NM_001289583, intron 1 of 19) 10564 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_77_659_-0.266766453451599_9.23293898752002_2.479113461889 chr12 33147645 33148360 + 2.479113461889 NA promoter-TSS (NR_015602) promoter-TSS (NR_015602) 316 NM_028139 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_77_659_-0.266766453451599_9.23293898752002_2.479113461889-2 chr4 120924428 120925611 + 2.479113461889 NA promoter-TSS (NM_028457) promoter-TSS (NM_028457) -14 NM_001160043 73172 Mm.151436 NM_028457 ENSMUSG00000028629 Exo5 3110037I16Rik|AV297100|Dem1|Exo V|mExo5 exonuclease 5 protein-coding common_peak2_82_488_0.275815214216115_9.07159826206029_2.47909290414922 chr8 111535995 111538259 + 2.47909290414922 NA 5' UTR (NM_001168622, exon 1 of 3) 5' UTR (NM_001168622, exon 1 of 3) 487 NM_001168621 170737 Mm.271578 NM_133206 ENSMUSG00000033545 Znrf1 B830022L21Rik|Rnf42|Zrfp1|nin283 zinc and ring finger 1 protein-coding common_peak1_27_105_0.558644295454727_7.00724260229056_2.47900019431123 chr11 54962543 54962977 + 2.47900019431123 NA intron (NM_001199275, intron 1 of 18) intron (NM_001199275, intron 1 of 18) 180 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak2_27_105_0.558644295454727_7.00724260229056_2.47900019431123 chr18 82825403 82826310 + 2.47900019431123 NA Intergenic Intergenic -30041 NR_125720 73985 Mm.399211 NR_125720 ENSMUSG00000097738 4930445N18Rik 3010027C24Rik RIKEN cDNA 4930445N18 gene ncRNA common_peak2_82_706_-0.256060535641051_9.33753613698887_2.47798287132726 chr5 104570976 104572263 + 2.47798287132726 NA Intergenic Intergenic 45884 NR_030673 100662 Mm.319836 NR_030673 ENSMUSG00000097392 D930016D06Rik 100041172|1110004B06Rik|AI451450|Gm3179 RIKEN cDNA D930016D06 gene ncRNA common_peak1_27_217_-0.481619574759001_7.52737453739743_2.47702370211542 chr4 126301035 126301592 + 2.47702370211542 NA intron (NM_199473, intron 2 of 3) CpG 14519 NM_199473 329941 Mm.296327 NM_199473 ENSMUSG00000056174 Col8a2 AI429819 collagen, type VIII, alpha 2 protein-coding common_peak2_27_217_-0.481619574759001_7.52737453739743_2.47702370211542 chr15 62178036 62179020 + 2.47702370211542 NA intron (NR_132746, intron 3 of 6) intron (NR_132746, intron 3 of 6) 40923 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_241_2415_-0.135225583503274_11.1707919475734_2.47681878486612 chr5 64504766 64506874 + 2.47681878486612 NA Intergenic Intergenic 28812 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA common_peak1_121_1093_-0.204265260559229_9.99326439251294_2.47630014251754 chr8 70872666 70874001 + 2.47630014251754 NA intron (NM_026964, intron 1 of 4) CpG 157 NM_026964 234388 Mm.295791 NM_026964 ENSMUSG00000007721 Ccdc124 1810023B24Rik coiled-coil domain containing 124 protein-coding common_peak1_189_1459_0.163329447694188_10.5934173776145_2.47620297132363 chr11 115706865 115708659 + 2.47620297132363 NA intron (NM_008163, intron 1 of 5) intron (NM_008163, intron 1 of 5) 835 NM_008163 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding common_peak2_230_1879_0.144339110361351_10.9486865017457_2.47512055782063 chr10 93169515 93173437 + 2.47512055782063 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 8691 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak2_70_593_-0.281159574953749_9.07373933332389_2.4750544268139 chr14 54712513 54714312 + 2.4750544268139 NA Intergenic PB1D10|SINE|Alu -1238 NM_207131 110794 Mm.236223 NM_207131 ENSMUSG00000052435 Cebpe C/EBPe|CRP1|Gm294 CCAAT/enhancer binding protein (C/EBP), epsilon protein-coding common_peak1_145_1343_-0.183386085206774_10.3006243801754_2.47488334709586 chr16 31947603 31949312 + 2.47488334709586 NA promoter-TSS (NR_027897) promoter-TSS (NR_027897) 64 NR_027897 106264 Mm.347369 NM_025320 ENSMUSG00000107002 0610012G03Rik AI839730 RIKEN cDNA 0610012G03 gene ncRNA common_peak2_114_1021_-0.210613089965792_9.89187293595473_2.47486420135362 chr11 22989842 22991687 + 2.47486420135362 NA exon (NM_009837, exon 1 of 14) exon (NM_009837, exon 1 of 14) 171 NM_009837 12464 Mm.296985 NM_009837 ENSMUSG00000007739 Cct4 2610204B21Rik|A45|C78323|Cctd chaperonin containing Tcp1, subunit 4 (delta) protein-coding common_peak2_247_2059_0.138090516222794_11.077473880182_2.4735407154954 chr11 61853782 61855923 + 2.4735407154954 NA 5' UTR (NM_013881, exon 1 of 27) 5' UTR (NM_013881, exon 1 of 27) 240 NM_013881 29869 Mm.162025 NM_013881 ENSMUSG00000004798 Ulk2 A830085I22Rik|AU015340|Unc51.2|mKIAA0623 unc-51 like kinase 2 protein-coding common_peak1_20_68_0.668950187020329_6.44299955028833_2.47341024429838 chr14 43829945 43830454 + 2.47341024429838 NA Intergenic Intergenic -10560 NM_007894 13586 Mm.86948 NM_007894 ENSMUSG00000072601 Ear1 EAR-1|ECP 1|Raf1 eosinophil-associated, ribonuclease A family, member 1 protein-coding unique_peak2_20_68_0.668950187020329_6.44299955028833_2.47341024429838 chr2 13416301 13416928 + 2.47341024429838 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 75262 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding unique_peak1_20_68_0.668950187020329_6.44299955028833_2.47341024429838 chr10 20005391 20005998 + 2.47341024429838 NA intron (NM_008580, intron 2 of 29) L1ME3Cz|LINE|L1 71168 NM_008580 26408 Mm.6595 NM_008580 ENSMUSG00000071369 Map3k5 7420452D20Rik|ASK|ASK1|MAPKKK5|Mekk5 mitogen-activated protein kinase kinase kinase 5 protein-coding common_peak1_20_68_0.668950187020329_6.44299955028833_2.47341024429838-2 chr5 72737491 72737922 + 2.47341024429838 NA intron (NM_001289495, intron 1 of 14) intron (NM_001289495, intron 1 of 14) -1104 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak2_130_897_0.206515627105727_9.91382944829401_2.47336579144277 chr14 47648803 47650392 + 2.47336579144277 NA intron (NM_001293635, intron 1 of 40) CpG 286 NM_001293635 16709 Mm.3110 NM_008477 ENSMUSG00000021843 Ktn1 - kinectin 1 protein-coding common_peak1_130_1185_-0.194801032699131_10.1144877781964_2.47325359330739 chr11 64079027 64080376 + 2.47325359330739 NA promoter-TSS (NM_178379) promoter-TSS (NM_178379) 217 NR_033780 66456 Mm.124828 NR_033780 ENSMUSG00000087497 2810001G20Rik AW045514 RIKEN cDNA 2810001G20 gene ncRNA common_peak1_20_162_-0.571253510432579_7.06310139901479_2.47307464227574 chr13 56133829 56134232 + 2.47307464227574 NA intron (NM_012015, intron 1 of 8) intron (NM_012015, intron 1 of 8) 1520 NM_012015 26914 Mm.283802 NM_012015 ENSMUSG00000015937 H2afy H2AF12M|mH2a1|macroH2A1 H2A histone family, member Y protein-coding unique_peak2_20_162_-0.571253510432579_7.06310139901479_2.47307464227574-2 chr5 44220093 44221220 + 2.47307464227574 NA intron (NM_173764, intron 1 of 13) intron (NM_173764, intron 1 of 13) 5950 NM_173764 231225 Mm.30688 NM_173764 ENSMUSG00000046985 Tapt1 4932414K18Rik transmembrane anterior posterior transformation 1 protein-coding unique_peak2_20_162_-0.571253510432579_7.06310139901479_2.47307464227574 chr4 118134366 118135561 + 2.47307464227574 NA promoter-TSS (NM_001161774) promoter-TSS (NM_001161774) -17 NM_001161774 20441 Mm.251002 NM_009176 ENSMUSG00000028538 St3gal3 ST3GalIII|ST3N|Siat3|Siat6 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding common_peak1_20_162_-0.571253510432579_7.06310139901479_2.47307464227574-2 chr15 10981173 10981689 + 2.47307464227574 NA promoter-TSS (NM_008537) promoter-TSS (NM_008537) -325 NM_008537 17117 Mm.2787 NM_008537 ENSMUSG00000022244 Amacr Macr1 alpha-methylacyl-CoA racemase protein-coding common_peak1_33_140_0.490597219761733_7.38484996227966_2.47295650297872 chr15 76925583 76926081 + 2.47295650297872 NA promoter-TSS (NM_001168276) promoter-TSS (NM_001168276) -384 NM_001168276 239546 Mm.183650 NM_172817 ENSMUSG00000054967 Zfp647 6030449J21|Es492|Znf250 zinc finger protein 647 protein-coding common_peak2_86_520_0.267658268387345_9.15896869647218_2.47168148045094-2 chr5 124115776 124116915 + 2.47168148045094 NA TTS (NM_025671) TTS (NM_025671) 237 NM_144509 65105 Mm.29430 NM_144509 ENSMUSG00000029404 Arl6ip4 AA408210|AA408365|Aip-4|Srp25 ADP-ribosylation factor-like 6 interacting protein 4 protein-coding common_peak2_86_520_0.267658268387345_9.15896869647218_2.47168148045094 chr17 22314034 22315332 + 2.47168148045094 NA Intergenic Intergenic 46717 NM_176962 319615 Mm.442162 NM_176962 ENSMUSG00000033972 Zfp944 6330416L07Rik zinc finger protein 944 protein-coding common_peak1_81_480_0.278162492481741_9.04897433001091_2.47161656299854 chr11 97150938 97152025 + 2.47161656299854 NA Intergenic CpG -1769 NM_198100 73174 Mm.27882 NM_198100 ENSMUSG00000038517 Tbkbp1 3110043L15Rik|ProSAPiP2|SINTBAD TBK1 binding protein 1 protein-coding common_peak2_61_510_-0.303884965016959_8.84523699842914_2.47077561580367 chr8 94097731 94099310 + 2.47077561580367 NA 5' UTR (NM_026116, exon 1 of 17) 5' UTR (NM_026116, exon 1 of 17) 291 NM_026116 67378 Mm.292107 NM_026116 ENSMUSG00000031755 Bbs2 2410125H22Rik|AI447581 Bardet-Biedl syndrome 2 (human) protein-coding common_peak1_150_1081_0.189035601158736_10.1740025844062_2.4706859873801 chr14 47188397 47189889 + 2.4706859873801 NA exon (NM_008102, exon 1 of 6) exon (NM_008102, exon 1 of 6) 259 NM_008102 14528 Mm.10651 NM_008102 ENSMUSG00000037580 Gch1 GTP-CH|GTPCH|Gch GTP cyclohydrolase 1 protein-coding common_peak2_61_328_0.331350742185421_8.52761914482795_2.47035102278269 chr4 137047787 137048866 + 2.47035102278269 NA intron (NM_198248, intron 1 of 18) CpG 369 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding common_peak1_110_721_0.228063140477525_9.60988659712593_2.46856872856374 chr10 80038958 80040426 + 2.46856872856374 NA promoter-TSS (NM_025554) promoter-TSS (NM_025554) -33 NM_025554 66420 Mm.18579 NM_025554 ENSMUSG00000004667 Polr2e 2410021N14Rik|25kDa|AW208866|RPB5|XAP4 polymerase (RNA) II (DNA directed) polypeptide E protein-coding common_peak2_110_721_0.228063140477525_9.60988659712593_2.46856872856374 chr1 138516696 138518360 + 2.46856872856374 NA intron (NM_001311148, intron 5 of 7) intron (NM_001311148, intron 5 of 7) 102229 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak1_120_1082_-0.204250682972878_9.97869218612189_2.46827192811219 chr6 13676943 13678197 + 2.46827192811219 NA intron (NM_175312, intron 1 of 4) CpG 396 NM_175312 101148 Mm.354863 NM_175312 ENSMUSG00000042742 Bmt2 AI666701|B630005N14Rik base methyltransferase of 25S rRNA 2 protein-coding unique_peak2_12_101_-0.743616408516918_6.30061713771304_2.46803562502644 chr14 75044721 75045477 + 2.46803562502644 NA intron (NM_198642, intron 9 of 13) intron (NM_198642, intron 9 of 13) 29072 NM_198642 271221 Mm.320280 NM_198642 ENSMUSG00000034959 Rubcnl 5031414D18Rik|Gm744|Gm911|Kiaa0226l RUN and cysteine rich domain containing beclin 1 interacting protein like protein-coding common_peak1_34_274_-0.421842093888488_7.89236676146778_2.4668827223513 chr4 88782023 88782623 + 2.4668827223513 NA 5' UTR (NM_197889, exon 1 of 1) 5' UTR (NM_197889, exon 1 of 1) 192 NM_197889 319146 Mm.368232 NM_197889 ENSMUSG00000096854 Ifnz 6030405N23Rik|BGIF|ENSMUSG00000073810|Lmtn interferon zeta protein-coding unique_peak2_34_274_-0.421842093888488_7.89236676146778_2.4668827223513 chr3 65928463 65930386 + 2.4668827223513 NA Intergenic Intergenic 28801 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_34_146_0.481773369687169_7.44055902967995_2.46481905517462-2 chr6 50431431 50432159 + 2.46481905517462 NA intron (NM_001163645, intron 1 of 21) intron (NM_001163645, intron 1 of 21) 24375 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_34_146_0.481773369687169_7.44055902967995_2.46481905517462 chr18 39250490 39251134 + 2.46481905517462 NA intron (NM_175164, intron 17 of 22) intron (NM_175164, intron 17 of 22) 236433 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak2_34_146_0.481773369687169_7.44055902967995_2.46481905517462 chr9 75314123 75314855 + 2.46481905517462 NA intron (NM_010313, intron 3 of 12) CpG 421 NM_138719 14697 Mm.17604 NM_010313 ENSMUSG00000032192 Gnb5 GBS|Gbeta5|flr guanine nucleotide binding protein (G protein), beta 5 protein-coding common_peak1_12_31_0.928808933454577_5.46440446672729_2.4646419254784 chr11 53790069 53790481 + 2.4646419254784 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 19802 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding unique_peak1_12_31_0.928808933454577_5.46440446672729_2.4646419254784 chr12 11231652 11232066 + 2.4646419254784 NA Intergenic Intergenic -22911 NM_019544 56184 Mm.117113 NM_019544 ENSMUSG00000047002 Msgn1 Msgn|pMsgn1 mesogenin 1 protein-coding common_peak1_12_31_0.928808933454577_5.46440446672729_2.4646419254784-2 chr12 25329722 25330083 + 2.4646419254784 NA Intergenic Intergenic 200728 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_195_1888_-0.153306127104972_10.8067539228359_2.46448405253259 chr14 20545446 20546758 + 2.46448405253259 NA promoter-TSS (NR_033571) promoter-TSS (NR_033571) -191 NR_033571 75602 Mm.437061 NR_033571 ENSMUSG00000084925 1810062O18Rik - RIKEN cDNA 1810062O18 gene ncRNA common_peak1_68_574_-0.284822825584943_9.02500673303927_2.46431303222102 chr6 90740301 90741691 + 2.46431303222102 NA intron (NM_001134384, intron 1 of 13) intron (NM_001134384, intron 1 of 13) -24467 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_60_321_0.333602572932355_8.4977181645808_2.46400518316264 chr13 63567544 63568460 + 2.46400518316264 NA Intergenic CpG -2482 NM_008957 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes patched 1 protein-coding unique_peak2_8_72_-0.911751508193706_5.73394880478316_2.4639682861317 chr2 175469868 175470479 + 2.4639682861317 NA intron (NM_001242943, intron 1 of 3) RMER17B|LTR|ERVK 113 NM_001242943 545490 Mm.484023 NM_001242943 ENSMUSG00000078879 Zfp973 6230416C02Rik|Gm14306|Gm14436|OTTMUSG00000016614 zinc finger protein 973 protein-coding common_peak1_126_1144_-0.198921188810262_10.0616712885792_2.46363565743928 chr5 123381089 123382997 + 2.46363565743928 NA Intergenic Intergenic -12755 NM_177582 208104 Mm.83277 NM_133917 ENSMUSG00000038342 Mlxip AW228700|Mir|bHLHe36 MLX interacting protein protein-coding common_peak1_195_1520_0.159296421558899_10.6504526485039_2.4635664615939 chr7 16923374 16924923 + 2.4635664615939 NA promoter-TSS (NM_007590) promoter-TSS (NM_007590) -116 NM_007590 12315 Mm.288630 NM_007590 ENSMUSG00000019370 Calm3 CaMA|R75142 calmodulin 3 protein-coding common_peak1_98_619_0.245330058539926_9.3987894345442_2.46167856631509 chr5 146947964 146949345 + 2.46167856631509 NA promoter-TSS (NM_025652) promoter-TSS (NM_025652) -3 NM_025652 66596 Mm.196528 NM_025652 ENSMUSG00000016503 Gtf3a 2010015D03Rik|2610111I01Rik|5330403M05Rik general transcription factor III A protein-coding common_peak1_28_225_-0.47151564790262_7.58442113846388_2.46160487563795-2 chr9 124039713 124040347 + 2.46160487563795 NA Intergenic Lx10|LINE|L1 18059 NM_009914 12771 Mm.57050 NM_009914 ENSMUSG00000035448 Ccr3 CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3 chemokine (C-C motif) receptor 3 protein-coding unique_peak2_28_225_-0.47151564790262_7.58442113846388_2.46160487563795 chr5 21369868 21371385 + 2.46160487563795 NA intron (NM_029195, intron 2 of 18) PB1D10|SINE|Alu -2047 NM_008013 14190 Mm.292100 NM_008013 ENSMUSG00000039899 Fgl2 AI385601|musfiblp fibrinogen-like protein 2 protein-coding common_peak1_28_225_-0.47151564790262_7.58442113846388_2.46160487563795 chr4 139616252 139616944 + 2.46160487563795 NA 3' UTR (NM_183148, exon 12 of 12) 3' UTR (NM_183148, exon 12 of 12) -6296 NM_175438 212647 Mm.273571 NM_175438 ENSMUSG00000028737 Aldh4a1 A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1 aldehyde dehydrogenase 4 family, member A1 protein-coding unique_peak2_18_146_-0.599308141439474_6.90001827411663_2.46136962597509-2 chr12 31997149 31998228 + 2.46136962597509 NA intron (NM_011158, intron 2 of 10) intron (NM_011158, intron 2 of 10) -47153 NM_153198 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding common_peak2_18_146_-0.599308141439474_6.90001827411663_2.46136962597509 chr11 109312099 109312727 + 2.46136962597509 NA Intergenic Intergenic -14232 NM_011268 19739 Mm.38548 NM_011268 ENSMUSG00000020599 Rgs9 RGS9-1|Rgs9-2 regulator of G-protein signaling 9 protein-coding unique_peak2_18_146_-0.599308141439474_6.90001827411663_2.46136962597509-3 chr6 130288364 130289360 + 2.46136962597509 NA intron (NM_013793, intron 3 of 7) L1_Mus3|LINE|L1 -6934 NM_008459 16628 Mm.445916 NM_008459 ENSMUSG00000072718 Klra10 Ly49J|Ly49i2 killer cell lectin-like receptor subfamily A, member 10 protein-coding unique_peak2_18_146_-0.599308141439474_6.90001827411663_2.46136962597509-4 chr8 125336662 125337675 + 2.46136962597509 NA Intergenic ORR1B1|LTR|ERVL-MaLR 155542 NM_001081337 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding unique_peak2_18_146_-0.599308141439474_6.90001827411663_2.46136962597509 chr12 8350487 8351256 + 2.46136962597509 NA Intergenic Intergenic 37438 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak1_18_146_-0.599308141439474_6.90001827411663_2.46136962597509 chr16 17070162 17070632 + 2.46136962597509 NA intron (NM_001291053, intron 1 of 3) CpG 258 NM_001291047 106369 Mm.237941 NM_023249 ENSMUSG00000022773 Ypel1 0610009L05Rik|1700016N17Rik|1700019O22Rik|4921520K19Rik|4930511F14Rik|AV118478|DGL-1|Dgl1|Ppil2|mdgl-1 yippee-like 1 (Drosophila) protein-coding common_peak2_132_916_0.203122389067307_9.94233911812871_2.4611052282159 chr5 142400619 142402700 + 2.4611052282159 NA exon (NM_199068, exon 1 of 9) exon (NM_199068, exon 1 of 9) 162 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf forkhead box K1 protein-coding common_peak1_132_916_0.203122389067307_9.94233911812871_2.4611052282159 chr9 65578452 65580179 + 2.4611052282159 NA intron (NM_153119, intron 1 of 5) intron (NM_153119, intron 1 of 5) 772 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_250_2092_0.13644088455829_11.0995770385349_2.46100952796481 chr16 52030977 52033328 + 2.46100952796481 NA intron (NM_001033238, intron 1 of 17) CpG 603 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_59_492_-0.310175092593852_8.79035629008099_2.46091346950361 chr8 116636227 116636703 + 2.46091346950361 NA intron (NM_029441, intron 1 of 6) B4A|SINE|B4 96526 NM_029441 75796 Mm.159575 NM_029441 ENSMUSG00000031758 Cdyl2 1700029M19Rik|4930453I21Rik|Gm20194 chromodomain protein, Y chromosome-like 2 protein-coding common_peak1_109_712_0.230145063128383_9.59283079800808_2.46022626700489 chr10 93335588 93336968 + 2.46022626700489 NA promoter-TSS (NR_038014) promoter-TSS (NR_038014) 46 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak1_226_2240_-0.139982186522662_11.0599358402491_2.45789276035646 chr9 100544749 100546849 + 2.45789276035646 NA intron (NM_010878, intron 1 of 3) CpG 254 NM_010878 17973 Mm.181485 NM_010878 ENSMUSG00000032475 Nck1 6330586M15Rik|D230010O13Rik|Nck|Nck-1 non-catalytic region of tyrosine kinase adaptor protein 1 protein-coding common_peak1_146_1353_-0.182001270511028_10.3120113883195_2.45779111734079 chr12 25393293 25395291 + 2.45779111734079 NA Intergenic Intergenic 265118 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_146_1353_-0.182001270511028_10.3120113883195_2.45779111734079 chr10 61451014 61453034 + 2.45779111734079 NA intron (NM_010124, intron 1 of 2) intron (NM_010124, intron 1 of 2) 645 NM_010124 13688 Mm.259516 NM_010124 ENSMUSG00000020091 Eif4ebp2 2810011I19Rik|4E-BP2|AA792569|BC010348|PHAS-II eukaryotic translation initiation factor 4E binding protein 2 protein-coding common_peak1_67_565_-0.287897359484999_9.00070956308938_2.45719089880448 chr2 26445386 26446534 + 2.45719089880448 NA promoter-TSS (NM_153125) promoter-TSS (NM_153125) -744 NM_153125 227648 Mm.206371 NM_153125 ENSMUSG00000026924 Sec16a AU024582|C230052J16Rik SEC16 homolog A, endoplasmic reticulum export factor protein-coding common_peak2_276_2828_-0.123856412348722_11.4041482552219_2.4565055721014 chr15 96707333 96711032 + 2.4565055721014 NA Intergenic Intergenic -9484 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_58_483_-0.313336832232769_8.76219482115821_2.4564423486722 chr1 185119722 185120639 + 2.4564423486722 NA Intergenic Intergenic -83988 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding unique_peak2_24_193_-0.513897650050744_7.34296401716176_2.45630032042215 chr6 145862601 145863829 + 2.45630032042215 NA exon (NM_024469, exon 5 of 5) exon (NM_024469, exon 5 of 5) 2205 NM_001271768 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak2_146_1045_0.190343616817026_10.1258389446555_2.45576447232049 chr18 32239498 32241126 + 2.45576447232049 NA promoter-TSS (NM_133658) promoter-TSS (NM_133658) -19 NM_133658 13872 Mm.282335 NM_133658 ENSMUSG00000024382 Ercc3 BTF2 p89|Ercc-3|XPB excision repair cross-complementing rodent repair deficiency, complementation group 3 protein-coding common_peak2_217_1744_0.149343225618978_10.8436829339065_2.45523247490521-2 chr11 115511949 115514972 + 2.45523247490521 NA intron (NM_008258, intron 1 of 4) intron (NM_008258, intron 1 of 4) 910 NM_008258 15374 Mm.1775 NM_008258 ENSMUSG00000020737 Hn1 - hematological and neurological expressed sequence 1 protein-coding common_peak2_217_1744_0.149343225618978_10.8436829339065_2.45523247490521 chr1 71099699 71103936 + 2.45523247490521 NA intron (NM_007525, intron 1 of 10) intron (NM_007525, intron 1 of 10) 1155 NM_007525 12021 Mm.10764 NM_007525 ENSMUSG00000026196 Bard1 ENSMUSG00000060893|ENSMUSG00000073653 BRCA1 associated RING domain 1 protein-coding common_peak1_172_1632_-0.164098544069146_10.5912598035271_2.4550267973141 chr15 86213319 86215382 + 2.4550267973141 NA promoter-TSS (NM_145476) promoter-TSS (NM_145476) -109 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak1_18_58_0.717721154035049_6.24150362637937_2.45494795766197-3 chr5 92467038 92467470 + 2.45494795766197 NA intron (NM_007644, intron 2 of 11) B1F|SINE|Alu 8697 NR_105843 102466159 NR_105843 ENSMUSG00000099160 Mir6415 Gm27714|mmu-mir-6415 microRNA 6415 ncRNA common_peak1_18_58_0.717721154035049_6.24150362637937_2.45494795766197 chr1 21364941 21365396 + 2.45494795766197 NA Intergenic Intergenic -3163 NM_001033904 433278 Mm.26006 NM_001033904 ENSMUSG00000041722 Khdc1c Khdc1b KH domain containing 1C protein-coding common_peak1_18_58_0.717721154035049_6.24150362637937_2.45494795766197-4 chr8 41374819 41375223 + 2.45494795766197 NA promoter-TSS (NM_019734) promoter-TSS (NM_019734) -324 NM_019734 11886 Mm.22547 NM_019734 ENSMUSG00000031591 Asah1 2310081N20Rik|AC|Asah N-acylsphingosine amidohydrolase 1 protein-coding common_peak1_18_58_0.717721154035049_6.24150362637937_2.45494795766197-2 chr10 8124181 8124602 + 2.45494795766197 NA Intergenic Intergenic -168268 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_18_58_0.717721154035049_6.24150362637937_2.45494795766197-5 chrX 57393154 57393550 + 2.45494795766197 NA promoter-TSS (NM_011252) promoter-TSS (NM_011252) -316 NM_001166623 19655 Mm.28275 NM_011252 ENSMUSG00000031134 Rbmx hnRNP G RNA binding motif protein, X chromosome protein-coding common_peak1_97_851_-0.231221072128797_9.61909908416144_2.45479503833458 chr12 40037549 40038458 + 2.45479503833458 NA promoter-TSS (NM_001039515) promoter-TSS (NM_001039515) -16 NM_001039515 11861 Mm.12723 NM_007487 ENSMUSG00000047446 Arl4a AI467555|Arl4 ADP-ribosylation factor-like 4A protein-coding common_peak2_162_1196_0.178637006977867_10.3145259404324_2.45440489529191 chr15 103363912 103367223 + 2.45440489529191 NA intron (NM_001314041, intron 1 of 30) intron (NM_001314041, intron 1 of 30) 1224 NM_010577 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak2_101_644_0.241127738003197_9.45371921931221_2.45402975828595 chr11 67051612 67053317 + 2.45402975828595 NA promoter-TSS (NM_001040026) promoter-TSS (NM_001040026) 154 NM_025510 66358 Mm.22511 NM_025510 ENSMUSG00000020910 Adprm 2310004I24Rik|MDS006 ADP-ribose/CDP-alcohol diphosphatase, manganese dependent protein-coding unique_peak2_21_169_-0.549593193443751_7.13459433941583_2.45377348750653-2 chr3 19659081 19660080 + 2.45377348750653 NA intron (NM_001081281, intron 3 of 9) intron (NM_001081281, intron 3 of 9) 15120 NM_001081281 381485 Mm.35419 NM_001081281 ENSMUSG00000060913 Trim55 D830041C10Rik|Murf2|Rnf29 tripartite motif-containing 55 protein-coding unique_peak2_21_169_-0.549593193443751_7.13459433941583_2.45377348750653 chr17 57182385 57183756 + 2.45377348750653 NA Intergenic Intergenic 11111 NM_019418 50930 Mm.483369 NM_019418 ENSMUSG00000005824 Tnfsf14 HVEM-L|HVEML|LIGHT|LTg|Ly113|Tnlg1d tumor necrosis factor (ligand) superfamily, member 14 protein-coding common_peak1_21_169_-0.549593193443751_7.13459433941583_2.45377348750653 chr13 51813597 51814138 + 2.45377348750653 NA Intergenic Intergenic -20120 NM_013660 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding unique_peak2_21_169_-0.549593193443751_7.13459433941583_2.45377348750653-3 chr9 32521381 32522646 + 2.45377348750653 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 19439 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_21_169_-0.549593193443751_7.13459433941583_2.45377348750653-3 chr7 45778814 45779302 + 2.45377348750653 NA Intergenic Intergenic -4889 NM_001005511 381983 Mm.44928 NM_001005511 ENSMUSG00000062044 Lmtk3 BC059845|aatyk3 lemur tyrosine kinase 3 protein-coding common_peak1_21_169_-0.549593193443751_7.13459433941583_2.45377348750653-2 chr6 120452874 120453192 + 2.45377348750653 NA Intergenic MERVL-int|LTR|ERVL -10164 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak1_115_1031_-0.209339318537973_9.90655759615427_2.45222808968945 chr11 69073136 69073808 + 2.45222808968945 NA TTS (NM_028336) TTS (NM_028336) 2663 NM_028336 66910 Mm.33964 NM_025838 ENSMUSG00000020895 Tmem107 1110004B13Rik|2810049P21Rik transmembrane protein 107 protein-coding common_peak2_212_2079_-0.145073751028153_10.9498309375144_2.45168431038594 chr10 118440239 118443840 + 2.45168431038594 NA intron (NM_008337, intron 1 of 3) intron (NM_008337, intron 1 of 3) 993 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak2_385_3627_0.104458863104091_11.8771881720806_2.45159686205195 chr2 92182656 92186970 + 2.45159686205195 NA promoter-TSS (NM_001109691) promoter-TSS (NM_001109691) 631 NM_138755 192285 Mm.330408 NM_138755 ENSMUSG00000058318 Phf21a 80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1 PHD finger protein 21A protein-coding common_peak1_131_907_0.203996082742677_9.92854652866225_2.45108176943962 chr11 88098567 88100084 + 2.45108176943962 NA non-coding (NR_045499, exon 4 of 4) non-coding (NR_045499, exon 4 of 4) 179 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_131_907_0.203996082742677_9.92854652866225_2.45108176943962 chr7 140940725 140942943 + 2.45108176943962 NA intron (NM_145387, intron 1 of 13) intron (NM_145387, intron 1 of 13) 253 NM_145387 212974 Mm.260139 NM_145387 ENSMUSG00000062031 Pgghg 5730511L01Rik|Athl1|BC023151 protein glucosylgalactosylhydroxylysine glucosidase protein-coding common_peak1_36_291_-0.410040907668607_7.98480410504571_2.4501273869046 chr9 106198848 106199694 + 2.4501273869046 NA promoter-TSS (NM_198931) promoter-TSS (NM_198931) -38 NM_026447 67905 Mm.23018 NM_026447 ENSMUSG00000020253 Ppm1m 2810423O19Rik|AW610647|C77250|PP2Ceta protein phosphatase 1M protein-coding common_peak1_184_1410_0.165386965492466_10.5451957553435_2.44930103639185 chr4 148557936 148559345 + 2.44930103639185 NA TTS (NM_020009) TTS (NM_020009) 213 NR_131061 50912 Mm.266635 NM_016699 ENSMUSG00000017264 Exosc10 PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4 exosome component 10 protein-coding common_peak1_297_3082_-0.118581860813197_11.5308282437006_2.44904633637965 chr9 75408140 75410079 + 2.44904633637965 NA intron (NM_015806, intron 1 of 5) intron (NM_015806, intron 1 of 5) 250 NM_027418 50772 Mm.480076 NM_015806 ENSMUSG00000042688 Mapk6 2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6 mitogen-activated protein kinase 6 protein-coding common_peak1_24_89_0.594162095806709_6.78893414423303_2.44871457475002 chr1 57995537 57996000 + 2.44871457475002 NA promoter-TSS (NM_199007) promoter-TSS (NM_199007) -206 NM_199007 68549 Mm.32800 NM_199007 ENSMUSG00000026039 Sgol2a 1110007N04Rik|4932411A20Rik|5730576N04Rik|AU018846|AV008062|D1Ertd8e|Sgol2|Tripin shugoshin-like 2a (S. pombe) protein-coding common_peak1_24_89_0.594162095806709_6.78893414423303_2.44871457475002-2 chr13 73733031 73733518 + 2.44871457475002 NA Intergenic L1MB4|LINE|L1 -30423 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak2_24_89_0.594162095806709_6.78893414423303_2.44871457475002 chr7 101600552 101601277 + 2.44871457475002 NA Intergenic MTC|LTR|ERVL-MaLR -19753 NM_019915 11872 Mm.57008 NM_019915 ENSMUSG00000030651 Art2b ART2.2|ARTC2|Art|Ly92b|Rt-6|Rt6|Rt6-2 ADP-ribosyltransferase 2b protein-coding common_peak1_24_89_0.594162095806709_6.78893414423303_2.44871457475002-3 chr19 44254657 44255196 + 2.44871457475002 NA Intergenic Intergenic -38750 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak1_24_89_0.594162095806709_6.78893414423303_2.44871457475002-4 chr19 58194071 58194727 + 2.44871457475002 NA Intergenic Intergenic -101805 NR_040449 791347 Mm.452208 NR_040449 Gm10007 ENSMUSG00000056739 predicted gene 10007 ncRNA common_peak2_225_2228_-0.140049091900995_11.0521563553093_2.4485607191163 chr12 104969763 104973702 + 2.4485607191163 NA intron (NM_001042699, intron 3 of 18) intron (NM_001042699, intron 3 of 18) 26945 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_145_1342_-0.182312251855457_10.3000874634997_2.44845836684007 chr17 34204363 34206031 + 2.44845836684007 NA intron (NM_011530, intron 1 of 11) intron (NM_011530, intron 1 of 11) 718 NM_011530 21355 Mm.14814 NM_011530 ENSMUSG00000024339 Tap2 ABC18|AI462429|APT2|Abcb3|Ham-2|Ham2|MTP2|PSF2|RING11|Tap-2|Y1|jas transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) protein-coding common_peak1_29_233_-0.461708286985702_7.63951057609055_2.44843088675035 chr2 128153158 128153717 + 2.44843088675035 NA intron (NM_009754, intron 3 of 3) intron (NM_009754, intron 3 of 3) 25862 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_29_233_-0.461708286985702_7.63951057609055_2.44843088675035 chr2 172345500 172346377 + 2.44843088675035 NA intron (NM_025912, intron 1 of 2) intron (NM_025912, intron 1 of 2) 361 NM_025912 67017 Mm.30013 NM_025912 ENSMUSG00000027495 Fam210b 2010011I20Rik|AI430961|AV108736 family with sequence similarity 210, member B protein-coding common_peak2_29_233_-0.461708286985702_7.63951057609055_2.44843088675035-2 chr6 120452564 120453257 + 2.44843088675035 NA Intergenic MERVL-int|LTR|ERVL -10287 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak1_339_3086_0.11287670261008_11.6484281189202_2.44817464620154 chr4 32147578 32151413 + 2.44817464620154 NA Intergenic Intergenic 185388 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_83_715_-0.253116511093046_9.35725752171773_2.44813156111705 chr15 80590031 80591365 + 2.44813156111705 NA intron (NM_001289442, intron 1 of 7) intron (NM_001289442, intron 1 of 7) 18101 NM_001289442 17444 Mm.12947 NM_010815 ENSMUSG00000042351 Grap2 GRAP-2|GRB2L|GRBLG|GRID|Gads|GrbX|Grf40|GrpL|Mona|P38 GRB2-related adaptor protein 2 protein-coding common_peak1_205_1621_0.154602090745824_10.7408591495902_2.44792881149282 chr3 100684561 100686476 + 2.44792881149282 NA promoter-TSS (NM_010763) promoter-TSS (NM_010763) -45 NM_010763 17156 Mm.271617 NM_010763 ENSMUSG00000008763 Man1a2 AI428775|AI528764|AI854422|Man1b|PCR2 mannosidase, alpha, class 1A, member 2 protein-coding common_peak1_37_299_-0.401842175912635_8.02789760253956_2.44786118189492 chr4 101250742 101251429 + 2.44786118189492 NA intron (NM_146145, intron 1 of 24) B3|SINE|B2 14197 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_78_457_0.282895303016373_8.98065143960513_2.44600637534983 chr13 108213942 108215355 + 2.44600637534983 NA intron (NM_029001, intron 1 of 7) CpG 244 NM_029001 74559 Mm.286127 NM_029001 ENSMUSG00000021696 Elovl7 9130013K24Rik|AI840082 ELOVL family member 7, elongation of long chain fatty acids (yeast) protein-coding unique_peak2_53_437_-0.325967181575223_8.61180346881356_2.44494736540669 chr9 78100316 78102576 + 2.44494736540669 NA intron (NM_001081490, intron 3 of 12) intron (NM_001081490, intron 3 of 12) 7210 NM_023605 71538 Mm.28584 NM_023605 ENSMUSG00000001366 Fbxo9 9030401P18Rik|AA986398 f-box protein 9 protein-coding common_peak1_53_437_-0.325967181575223_8.61180346881356_2.44494736540669 chr17 35999934 36001123 + 2.44494736540669 NA intron (NR_015618, intron 1 of 1) RSINE1|SINE|B4 6024 NR_015618 77810 Mm.483143 NR_015618 A930015D03Rik - RIKEN cDNA A930015D03 gene ncRNA unique_peak2_7_65_-0.974753167419641_5.55701753564863_2.44476666246295-2 chr17 17064085 17064576 + 2.44476666246295 NA intron (NM_001005358, intron 1 of 3) intron (NM_001005358, intron 1 of 3) 227 NM_001163919 449000 Mm.483718 NM_001005358 ENSMUSG00000096696 Zfp960 - zinc finger protein 960 protein-coding unique_peak2_7_65_-0.974753167419641_5.55701753564863_2.44476666246295 chr13 23453482 23454050 + 2.44476666246295 NA Intergenic Intergenic 12135 NM_013483 12231 Mm.1420 NM_013483 ENSMUSG00000000706 Btn1a1 Btn butyrophilin, subfamily 1, member A1 protein-coding unique_peak2_16_131_-0.640857858384281_6.72396519016631_2.44464722710273-2 chr5 114822729 114823679 + 2.44464722710273 NA intron (NM_181075, intron 1 of 1) RLTR10E|LTR|ERVK 264 NM_181075 330173 Mm.482205 NM_181075 ENSMUSG00000092486 2610524H06Rik - RIKEN cDNA 2610524H06 gene protein-coding common_peak1_16_131_-0.640857858384281_6.72396519016631_2.44464722710273 chr16 24217152 24217604 + 2.44464722710273 NA Intergenic Intergenic -175972 NM_178665 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding unique_peak2_16_131_-0.640857858384281_6.72396519016631_2.44464722710273 chr4 59319094 59320026 + 2.44464722710273 NA intron (NM_001163288, intron 15 of 16) intron (NM_001163288, intron 15 of 16) 59509 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_16_131_-0.640857858384281_6.72396519016631_2.44464722710273-2 chr6 87009355 87009787 + 2.44464722710273 NA promoter-TSS (NM_020045) promoter-TSS (NM_020045) -265 NM_001170591 56748 Mm.23809 NM_020045 ENSMUSG00000029993 Nfu1 0610006G17Rik|CGI-33|Hirip5 NFU1 iron-sulfur cluster scaffold protein-coding common_peak2_55_285_0.353305724425892_8.33652419899133_2.44452598843439 chr1 44147357 44148635 + 2.44452598843439 NA 5' UTR (NM_011729, exon 1 of 15) 5' UTR (NM_011729, exon 1 of 15) 252 NM_011729 22592 Mm.2213 NM_011729 ENSMUSG00000026048 Ercc5 Xpg excision repair cross-complementing rodent repair deficiency, complementation group 5 protein-coding common_peak1_227_1849_0.144413786519213_10.9255164486633_2.44418725214367 chr12 100994307 100996832 + 2.44418725214367 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 26199 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak2_14_116_-0.688320598172057_6.52620442049738_2.44411372652905 chr9 103365935 103366612 + 2.44411372652905 NA promoter-TSS (NM_001134426) promoter-TSS (NM_001134426) -493 NM_001134426 321022 Mm.261025 NM_175565 ENSMUSG00000032803 Cdv3 2510010F10Rik|C230084J24Rik|C79446|TPP36 carnitine deficiency-associated gene expressed in ventricle 3 protein-coding common_peak1_21_73_0.650344377065001_6.53462555416145_2.44411372652905-7 chr4 84020721 84021160 + 2.44411372652905 NA Intergenic Intergenic 23939 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA unique_peak2_21_73_0.650344377065001_6.53462555416145_2.44411372652905 chr17 8092546 8093174 + 2.44411372652905 NA intron (NM_001033442, intron 2 of 3).2 intron (NM_001033442, intron 2 of 3).2 8368 NM_001033442 381059 Mm.490353 NM_001033442 ENSMUSG00000095720 Gm1604b ENSMUSG00000073470|Gm1604 predicted gene 1604b protein-coding common_peak2_21_73_0.650344377065001_6.53462555416145_2.44411372652905 chr10 91187575 91188102 + 2.44411372652905 NA Intergenic Intergenic -16219 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak1_21_73_0.650344377065001_6.53462555416145_2.44411372652905-6 chr3 142531554 142532191 + 2.44411372652905 NA intron (NM_001083312, intron 1 of 10) ID_B1|SINE|B4 1536 NM_145545 229900 Mm.45740 NM_145545 ENSMUSG00000040253 Gbp7 9830147J24Rik guanylate binding protein 7 protein-coding unique_peak2_14_116_-0.688320598172057_6.52620442049738_2.44411372652905-5 chr8 122678139 122678985 + 2.44411372652905 NA promoter-TSS (NM_177289) promoter-TSS (NM_177289) -387 NM_177289 12398 Mm.194339 NM_009824 ENSMUSG00000006362 Cbfa2t3 A630044F12Rik|AI465270|AW229127|Cbfa2t3h|ETO-2|Eto2|MTGR2 core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) protein-coding unique_peak2_14_116_-0.688320598172057_6.52620442049738_2.44411372652905 chr10 62865082 62866109 + 2.44411372652905 NA intron (NM_027384, intron 1 of 10) intron (NM_027384, intron 1 of 10) 14419 NM_027384 52463 Mm.17774 NM_027384 ENSMUSG00000047146 Tet1 2510010B09Rik|AA517754|BB001228|Cxxc6|D10Ertd17e|LCX|mKIAA1676 tet methylcytosine dioxygenase 1 protein-coding unique_peak2_14_116_-0.688320598172057_6.52620442049738_2.44411372652905-3 chr19 57124877 57125680 + 2.44411372652905 NA intron (NM_001290813, intron 6 of 20) G-rich|Low_complexity|Low_complexity -6254 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_21_73_0.650344377065001_6.53462555416145_2.44411372652905-5 chr15 78486614 78487126 + 2.44411372652905 NA intron (NM_008368, intron 5 of 9) intron (NM_008368, intron 5 of 9) 8196 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding common_peak1_21_73_0.650344377065001_6.53462555416145_2.44411372652905 chr1 97621367 97621827 + 2.44411372652905 NA Intergenic Intergenic 40421 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak1_21_73_0.650344377065001_6.53462555416145_2.44411372652905-4 chr13 93499915 93500389 + 2.44411372652905 NA promoter-TSS (NM_021310) promoter-TSS (NM_021310) -344 NM_021310 57748 Mm.100273 NM_021310 ENSMUSG00000021690 Jmy - junction-mediating and regulatory protein protein-coding unique_peak2_21_73_0.650344377065001_6.53462555416145_2.44411372652905-2 chr3 19307945 19308566 + 2.44411372652905 NA intron (NM_001122759, intron 1 of 12) intron (NM_001122759, intron 1 of 12) 3067 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak1_21_73_0.650344377065001_6.53462555416145_2.44411372652905-3 chr12 86897350 86897833 + 2.44411372652905 NA Intergenic Intergenic -12777 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_21_73_0.650344377065001_6.53462555416145_2.44411372652905-2 chr3 18664690 18665359 + 2.44411372652905 NA Intergenic Intergenic -184547 NR_040544 73959 Mm.60616 NR_040544 ENSMUSG00000102699 4930433B08Rik - RIKEN cDNA 4930433B08 gene ncRNA unique_peak2_14_116_-0.688320598172057_6.52620442049738_2.44411372652905-4 chr4 149104032 149104587 + 2.44411372652905 NA exon (NM_010044, exon 1 of 5) exon (NM_010044, exon 1 of 5) 167 NM_001025296 13347 Mm.41433 NM_010044 ENSMUSG00000028974 Dffa A330085O09Rik|DFF35|Dff45|ICAD|ICAD-L|ICAD-S DNA fragmentation factor, alpha subunit protein-coding common_peak1_21_73_0.650344377065001_6.53462555416145_2.44411372652905-2 chr1 127640989 127641455 + 2.44411372652905 NA intron (NM_028135, intron 2 of 7) intron (NM_028135, intron 2 of 7) 36799 NM_028135 72160 Mm.281287 NM_028135 ENSMUSG00000026347 Tmem163 2610024A01Rik|SV31 transmembrane protein 163 protein-coding unique_peak2_14_116_-0.688320598172057_6.52620442049738_2.44411372652905-2 chr14 61997689 61998677 + 2.44411372652905 NA Intergenic Intergenic 294796 NM_173419 239133 Mm.127330 NM_173419 ENSMUSG00000048281 Dleu7 BC038059 deleted in lymphocytic leukemia, 7 protein-coding common_peak1_111_730_0.2260617764382_9.62675848417154_2.44390161586834 chr6 146641907 146643385 + 2.44390161586834 NA promoter-TSS (NM_025315) promoter-TSS (NM_025315) 67 NM_025315 108098 Mm.26212 NM_025315 ENSMUSG00000030291 Med21 0610007L03Rik|AI449604|D19234|D6Ertd782e|Srb7|Surb7 mediator complex subunit 21 protein-coding unique_peak2_11_93_-0.767425694771898_6.17087600429169_2.44359761317891-4 chr7 106442563 106443494 + 2.44359761317891 NA Intergenic RSINE1|SINE|B4 -1955 NR_003967 209380 Mm.461779 NM_001001318 Gm4759 EG209380 GTPase, very large interferon inducible 1 pseudogene pseudo unique_peak2_11_93_-0.767425694771898_6.17087600429169_2.44359761317891 chr10 128860705 128861432 + 2.44359761317891 NA intron (NM_025364, intron 9 of 10) intron (NM_025364, intron 9 of 10) 30650 NM_010272 14561 Mm.299218 NM_010272 ENSMUSG00000025352 Gdf11 BMP-11|Bmp11 growth differentiation factor 11 protein-coding unique_peak2_11_93_-0.767425694771898_6.17087600429169_2.44359761317891-2 chr14 55988182 55988617 + 2.44359761317891 NA Intergenic Intergenic 16971 NM_001024714 545055 Mm.378966 NM_001024714 ENSMUSG00000068289 Cma2 Mcp10 chymase 2, mast cell protein-coding unique_peak2_11_93_-0.767425694771898_6.17087600429169_2.44359761317891-3 chr16 93446775 93447600 + 2.44359761317891 NA intron (NR_040494, intron 1 of 2) (CA)n|Simple_repeat|Simple_repeat 11685 NR_040494 72264 Mm.396204 NR_040494 ENSMUSG00000099968 1700029J03Rik - RIKEN cDNA 1700029J03 gene ncRNA common_peak1_71_601_-0.275709692514322_9.09576483050254_2.44327866357545 chr4 125066358 125067393 + 2.44327866357545 NA exon (NM_175246, exon 1 of 4) exon (NM_175246, exon 1 of 4) 182 NM_175246 76793 Mm.22548 NM_175246 ENSMUSG00000050213 Snip1 2410133M08Rik Smad nuclear interacting protein 1 protein-coding common_peak2_107_950_-0.217869341648257_9.78436686003644_2.4430528800989-2 chr4 117154794 117156858 + 2.4430528800989 NA promoter-TSS (NR_030704) promoter-TSS (NR_030704) 22 NR_030704 100216533 NR_030704 ENSMUSG00000092680 Snord55 - small nucleolar RNA, C/D box 55 snoRNA common_peak2_107_950_-0.217869341648257_9.78436686003644_2.4430528800989 chr4 102605733 102609240 + 2.4430528800989 NA TTS (NM_001177981) TTS (NM_001177981) 17643 NM_001177981 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak1_52_428_-0.329092072056433_8.58028780147133_2.44291772804433 chr8 95434075 95434890 + 2.44291772804433 NA intron (NM_008187, intron 1 of 5) CpG 387 NM_008187 14894 Mm.2080 NM_008187 ENSMUSG00000031796 Cfap20 2600014O15Rik|AL024127|Gtl3|T10-2A2 cilia and flagella associated protein 20 protein-coding common_peak2_52_428_-0.329092072056433_8.58028780147133_2.44291772804433 chr11 120850259 120851868 + 2.44291772804433 NA intron (NM_027745, intron 18 of 18) B1F1|SINE|Alu -26516 NM_007988 14104 Mm.236443 NM_007988 ENSMUSG00000025153 Fasn A630082H08Rik|FAS fatty acid synthase protein-coding common_peak2_92_570_0.253469785524747_9.28408182812522_2.44251109076296 chr16 11908257 11909923 + 2.44251109076296 NA intron (NR_033509, intron 2 of 2) intron (NR_033509, intron 2 of 2) 333 NM_146067 223978 Mm.86360 NM_146067 ENSMUSG00000065979 Cpped1 C530044N13Rik calcineurin-like phosphoesterase domain containing 1 protein-coding common_peak1_36_159_0.457855556324048_7.55085587304939_2.44227032225063 chr16 78539446 78540034 + 2.44227032225063 NA TTS (NM_001252440) TTS (NM_001252440) -20576 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak1_36_159_0.457855556324048_7.55085587304939_2.44227032225063-2 chr2 74578206 74578938 + 2.44227032225063 NA intron (NM_027133, intron 1 of 12) CpG 376 NM_001110209 69605 Mm.156113 NM_027133 ENSMUSG00000009207 Lnpk 2310011O18Rik|4921514L11Rik|9530051D01Rik|AI666268|Lnp|Lnpk1|Ul|ulnaless lunapark, ER junction formation factor protein-coding common_peak1_96_603_0.246933624038331_9.36187155134424_2.44160891472111 chr2 126490344 126491636 + 2.44160891472111 NA intron (NM_001080944, intron 1 of 27) intron (NM_001080944, intron 1 of 27) 563 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak2_96_603_0.246933624038331_9.36187155134424_2.44160891472111 chr1 44101398 44102643 + 2.44160891472111 NA intron (NM_029368, intron 1 of 7) CpG 368 NM_029368 75623 Mm.348017 NM_029368 ENSMUSG00000026049 Tex30 1700029F09Rik|3110030D08Rik testis expressed 30 protein-coding common_peak1_82_705_-0.254018504102833_9.33651512121977_2.44156324970066 chr19 43675120 43676015 + 2.44156324970066 NA promoter-TSS (NM_145156) promoter-TSS (NM_145156) 389 NR_045645 100502982 Mm.313570 NR_045645 BC037704 - cDNA sequence BC037704 ncRNA common_peak1_77_658_-0.264578894213834_9.23184520790113_2.44141485567175 chr3 146780673 146781634 + 2.44141485567175 NA exon (NM_001164200, exon 1 of 10) exon (NM_001164200, exon 1 of 10) 263 NM_001164200 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak1_64_537_-0.294547842223727_8.92418844144476_2.4413995279713 chr11 70650631 70651557 + 2.4413995279713 NA TTS (NM_011072) TTS (NM_011072) 3556 NM_011072 18643 Mm.2647 NM_011072 ENSMUSG00000018293 Pfn1 Pfn profilin 1 protein-coding common_peak1_37_165_0.451937083236322_7.60100797296509_2.4393704020589 chr6 34383986 34384759 + 2.4393704020589 NA exon (NM_172398, exon 1 of 10) exon (NM_172398, exon 1 of 10) 125 NM_172398 67861 Mm.70371 NM_172398 ENSMUSG00000061758 Akr1b10 2310005E10Rik|Akr1b16 aldo-keto reductase family 1, member B10 (aldose reductase) protein-coding common_peak2_29_117_0.526013383235862_7.14564974097977_2.43859684717827-2 chr1 51514047 51514999 + 2.43859684717827 NA Intergenic Intergenic -36124 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak2_29_117_0.526013383235862_7.14564974097977_2.43859684717827 chr1 21078627 21079352 + 2.43859684717827 NA intron (NM_177409, intron 1 of 10) CpG 236 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding unique_peak2_29_117_0.526013383235862_7.14564974097977_2.43859684717827 chr7 100851595 100852658 + 2.43859684717827 NA intron (NM_177073, intron 2 of 10) intron (NM_177073, intron 2 of 10) 11287 NM_177073 320100 Mm.40336 NM_177073 ENSMUSG00000008318 Relt E430021K24Rik|Tnfrsf19l RELT tumor necrosis factor receptor protein-coding common_peak2_29_117_0.526013383235862_7.14564974097977_2.43859684717827-3 chr2 11211433 11212188 + 2.43859684717827 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 39428 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak2_147_1054_0.189980989989577_10.1380177785893_2.4385549244552-2 chr9 21591567 21594139 + 2.4385549244552 NA promoter-TSS (NM_138303) promoter-TSS (NM_138303) -22 NM_001205157 74766 Mm.475712 NM_138303 ENSMUSG00000032182 Yipf2 1300010K09Rik Yip1 domain family, member 2 protein-coding common_peak2_147_1054_0.189980989989577_10.1380177785893_2.4385549244552 chr10 8212825 8215382 + 2.4385549244552 NA intron (NM_177387, intron 7 of 7) intron (NM_177387, intron 7 of 7) -257980 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding unique_peak2_39_316_-0.390592491322275_8.11304278447827_2.43832124367657 chr11 69837634 69839325 + 2.43832124367657 NA promoter-TSS (NM_026982) promoter-TSS (NM_026982) -46 NM_026982 69186 Mm.248772 NM_026982 ENSMUSG00000070394 Tmem256 1810027O10Rik|3110009M16Rik transmembrane protein 256 protein-coding common_peak1_222_1797_0.146306568439956_10.8853305897344_2.43781970273372 chr3 79177417 79178970 + 2.43781970273372 NA Intergenic L1MB8|LINE|L1 -32318 NM_001099624 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak1_38_171_0.446678694905763_7.64960410215498_2.43773934866744 chr11 11700355 11701170 + 2.43773934866744 NA intron (NM_001301866, intron 2 of 5) intron (NM_001301866, intron 2 of 5) 10585 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding unique_peak2_38_171_0.446678694905763_7.64960410215498_2.43773934866744 chr15 66969040 66970445 + 2.43773934866744 NA promoter-TSS (NM_008681) promoter-TSS (NM_008681) -101 NM_008681 17988 Mm.30837 NM_008681 ENSMUSG00000005125 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 protein-coding common_peak1_296_2597_0.122403264519567_11.4043873477077_2.437564179095 chr10 84575580 84577969 + 2.437564179095 NA promoter-TSS (NM_146008) promoter-TSS (NM_146008) -173 NM_146008 216198 Mm.296142 NM_146008 ENSMUSG00000020034 Tcp11l2 E430026E19Rik t-complex 11 (mouse) like 2 protein-coding common_peak1_294_2575_0.122715113805528_11.3922744350174_2.4368275150893 chr6 119478575 119481382 + 2.4368275150893 NA exon (NM_133940, exon 1 of 1) exon (NM_133940, exon 1 of 1) 310 NM_133940 101358 Mm.125477 NM_133940 ENSMUSG00000030019 Fbxl14 AW322056|Fbx14l F-box and leucine-rich repeat protein 14 protein-coding common_peak1_178_1352_0.167598461446232_10.4857453546997_2.43621931167263 chr9 70678852 70680118 + 2.43621931167263 NA intron (NM_007399, intron 1 of 15) CpG 484 NM_007399 11487 Mm.3037 NM_007399 ENSMUSG00000054693 Adam10 1700031C13Rik|MADM|kuz|kuzbanian a disintegrin and metallopeptidase domain 10 protein-coding common_peak2_155_1130_0.182784857990754_10.2347756429852_2.43581158988641 chr5 125136493 125139083 + 2.43581158988641 NA intron (NM_011424, intron 1 of 46) intron (NM_011424, intron 1 of 46) 41426 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak1_51_420_-0.335642867239107_8.54985498944684_2.43567382267672 chr7 28961590 28962314 + 2.43567382267672 NA intron (NM_021895, intron 1 of 20) CpG 328 NM_021895 60595 Mm.81144 NM_021895 ENSMUSG00000054808 Actn4 C77391 actinin alpha 4 protein-coding common_peak2_190_1471_0.160809549929782_10.6039667310219_2.43565698788899 chr4 8689566 8692414 + 2.43565698788899 NA intron (NM_001277149, intron 1 of 37) CpG 584 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_190_1471_0.160809549929782_10.6039667310219_2.43565698788899 chr9 36767966 36768900 + 2.43565698788899 NA promoter-TSS (NM_008408) promoter-TSS (NM_008408) -855 NM_008408 16430 Mm.2863 NM_008408 ENSMUSG00000032116 Stt3a AA408947|BB081708|Itm1 STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) protein-coding unique_peak2_19_153_-0.575652313064125_6.97896038416284_2.43530082553505 chr7 29211094 29212036 + 2.43530082553505 NA intron (NM_001164658, intron 1 of 27) intron (NM_001164658, intron 1 of 27) 2468 NM_001164658 320225 Mm.349382 NM_001039721 ENSMUSG00000049676 Catsperg1 A230107C01Rik|Catsperg catsper channel auxiliary subunit gamma 1 protein-coding common_peak1_19_153_-0.575652313064125_6.97896038416284_2.43530082553505 chr8 72421642 72422106 + 2.43530082553505 NA promoter-TSS (NM_001289859) promoter-TSS (NM_001289859) -400 NM_001289859 13859 Mm.288894 NM_007944 ENSMUSG00000006276 Eps15l1 9830147J04Rik|AI593686|Eps15-rs|Eps15R epidermal growth factor receptor pathway substrate 15-like 1 protein-coding common_peak2_117_783_0.217428872112974_9.7234242801717_2.43497908922063 chr5 118464136 118466729 + 2.43497908922063 NA Intergenic Intergenic -95287 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_52_264_0.36589321599255_8.23279515744684_2.43485563770595 chr5 144100345 144100912 + 2.43485563770595 NA 5' UTR (NM_001081109, exon 1 of 14) 5' UTR (NM_001081109, exon 1 of 14) 192 NM_001081109 231876 Mm.288726 NM_001081109 ENSMUSG00000038970 Lmtk2 2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk lemur tyrosine kinase 2 protein-coding common_peak2_52_264_0.36589321599255_8.23279515744684_2.43485563770595 chr10 13473765 13475326 + 2.43485563770595 NA promoter-TSS (NM_001195065) promoter-TSS (NM_001195065) -149 NM_001195065 215789 Mm.283359 NM_001033257 ENSMUSG00000062866 Phactr2 AV158170|BC012871 phosphatase and actin regulator 2 protein-coding common_peak2_113_1010_-0.210456251166484_9.87633915631977_2.4347087768194 chr10 81544156 81546198 + 2.4347087768194 NA promoter-TSS (NM_010301) promoter-TSS (NM_010301) -131 NM_010301 14672 Mm.260925 NM_010301 ENSMUSG00000034781 Gna11 Dsk7|E430025L19 guanine nucleotide binding protein, alpha 11 protein-coding unique_peak2_25_201_-0.502790238110863_7.40681636369636_2.43470515848918 chr1 178320582 178322130 + 2.43470515848918 NA intron (NM_025511, intron 1 of 3) intron (NM_025511, intron 1 of 3) 2203 NM_025511 66359 Mm.489720 NM_025511 ENSMUSG00000026500 Cox20 2310005N03Rik|Fam36a COX20 Cox2 chaperone protein-coding common_peak1_25_201_-0.502790238110863_7.40681636369636_2.43470515848918 chr12 73698345 73698989 + 2.43470515848918 NA intron (NM_001313977, intron 7 of 14) intron (NM_001313977, intron 7 of 14) 113871 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak2_47_384_-0.348326856303812_8.41455120743036_2.43455057651468 chr15 58415095 58416611 + 2.43455057651468 NA intron (NM_145959, intron 1 of 23) CpG 385 NM_145959 210998 Mm.3224 NM_145959 ENSMUSG00000037119 Fam91a1 AV220772|BC033609|D15Ertd621e|SKIN|mKIAA0493 family with sequence similarity 91, member A1 protein-coding common_peak1_50_411_-0.338829750055762_8.51708565215534_2.43452466110976 chr5 20882322 20883161 + 2.43452466110976 NA promoter-TSS (NM_172992) promoter-TSS (NM_172992) 288 NM_177601 212090 Mm.347525 NM_177601 ENSMUSG00000045435 Tmem60 BC027828 transmembrane protein 60 protein-coding common_peak1_103_662_0.235780806901056_9.49075546356312_2.43444443812961 chr3 96104467 96105171 + 2.43444443812961 NA 5' UTR (NM_001025613, exon 1 of 13) 5' UTR (NM_001025613, exon 1 of 13) 292 NM_001025614 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding common_peak2_64_351_0.3174829016956_8.6181730694851_2.43404671655606 chr9 57277593 57279491 + 2.43404671655606 NA Intergenic Intergenic -15943 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding common_peak2_44_358_-0.36166139625842_8.30700933569384_2.43401508784261 chr14 63177971 63178856 + 2.43401508784261 NA 5' UTR (NM_010191, exon 3 of 10) 5' UTR (NM_010191, exon 3 of 10) 1165 NM_010191 14137 Mm.474432 NM_010191 ENSMUSG00000021273 Fdft1 SQS|SS farnesyl diphosphate farnesyl transferase 1 protein-coding common_peak1_49_402_-0.342008525205227_8.48363176592535_2.43392693822376 chr15 79956722 79957360 + 2.43392693822376 NA Intergenic Intergenic -24395 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak1_91_562_0.254694314385993_9.26433826927323_2.43309842062639 chr15 3270296 3271685 + 2.43309842062639 NA promoter-TSS (NM_009155) promoter-TSS (NM_009155) 13 NM_009155 20363 Mm.392203 NM_009155 ENSMUSG00000064373 Selenop AU018766|D15Ucla1|Se-P|Sepp1|selp selenoprotein P protein-coding common_peak1_141_999_0.193987572371286_10.0627780708477_2.43309287750711 chr18 79064262 79066283 + 2.43309287750711 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 44119 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_717_7951_0.0706033688715841_12.9924037259981_2.43248905981882 chr15 79891584 79899405 + 2.43248905981882 NA exon (NM_030255, exon 2 of 8) exon (NM_030255, exon 2 of 8) -2356 NR_030675 109361 Mm.394656 NR_030675 D730005E14Rik - RIKEN cDNA D730005E14 gene ncRNA common_peak1_63_343_0.323213130795782_8.58787132009999_2.43178691894833 chr6 33249110 33249781 + 2.43178691894833 NA intron (NM_009148, intron 1 of 17) intron (NM_009148, intron 1 of 17) 295 NM_009148 20336 Mm.265512 NM_009148 ENSMUSG00000029763 Exoc4 C78892|Sec8|Sec8l1 exocyst complex component 4 protein-coding common_peak1_45_367_-0.358488840777147_8.34431753566844_2.43134969900949 chr10 58369453 58370155 + 2.43134969900949 NA intron (NM_026148, intron 1 of 9) intron (NM_026148, intron 1 of 9) -1650 NM_201242 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak1_102_900_-0.223835412036799_9.70346558979514_2.43094847220885 chr5 118478397 118479447 + 2.43094847220885 NA Intergenic Intergenic -81797 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_149_1073_0.187983741490612_10.1627701487307_2.43051363025884 chr3 157534008 157535077 + 2.43051363025884 NA intron (NM_017381, intron 1 of 9) CpG 145 NM_017381 53861 Mm.259036 NM_017381 ENSMUSG00000028180 Zranb2 AI227013|Zfp265|Zis|Znf265 zinc finger, RAN-binding domain containing 2 protein-coding common_peak2_135_944_0.199202675424806_9.98377185682084_2.43044631483496 chr11 113648839 113650500 + 2.43044631483496 NA exon (NM_013581, exon 1 of 14) exon (NM_013581, exon 1 of 14) 140 NM_013581 16834 Mm.261620 NM_013581 ENSMUSG00000018661 Cog1 6030445I15|Ldlb|mKIAA1381 component of oligomeric golgi complex 1 protein-coding common_peak2_46_376_-0.355289625842646_8.38077590034734_2.42947045916004 chr7 3616917 3618209 + 2.42947045916004 NA intron (NM_025348, intron 1 of 3) intron (NM_025348, intron 1 of 3) 190 NM_025348 66091 Mm.17851 NM_025348 ENSMUSG00000035674 Ndufa3 1010001M12Rik|1700022J01Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 protein-coding common_peak2_614_6543_0.0777263351552797_12.7148202005194_2.42882759874689 chr3 105891183 105896778 + 2.42882759874689 NA intron (NM_027025, intron 1 of 6) intron (NM_027025, intron 1 of 6) -10441 NM_009631 11542 Mm.235024 NM_009631 ENSMUSG00000000562 Adora3 A3AR|A3R|AA3R|ARA3|Gpcr2 adenosine A3 receptor protein-coding common_peak1_26_208_-0.485151565241288_7.46478334946024_2.42811296133558 chr18 38631187 38631742 + 2.42811296133558 NA Intergenic Intergenic -30196 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty homolog 4 (Drosophila) protein-coding unique_peak2_26_208_-0.485151565241288_7.46478334946024_2.42811296133558 chr11 48833399 48834562 + 2.42811296133558 NA intron (NM_053166, intron 1 of 6) intron (NM_053166, intron 1 of 6) 7842 NM_053166 94089 Mm.390335 NM_053166 ENSMUSG00000040350 Trim7 AI790312 tripartite motif-containing 7 protein-coding common_peak2_40_184_0.430061804549114_7.74641236279087_2.42787585775377 chr12 3855317 3856687 + 2.42787585775377 NA intron (NM_001271753, intron 3 of 22) intron (NM_001271753, intron 3 of 22) 6242 NR_045884 100038522 Mm.417270 NR_045884 ENSMUSG00000073242 Dnmt3aos ENSMUSG00000073242|Gm10485 DNA methyltransferase 3A, opposite strand ncRNA unique_peak2_31_249_-0.442918710350563_7.74432492948681_2.42787585775377 chr10 117939996 117941424 + 2.42787585775377 NA intron (NR_045342, intron 3 of 3) intron (NR_045342, intron 3 of 3) 15251 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_31_249_-0.442918710350563_7.74432492948681_2.42787585775377 chr1 133697327 133697964 + 2.42787585775377 NA Intergenic B2_Mm2|SINE|B2 -7537 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding common_peak1_405_4440_-0.0978571210027184_12.0677402954658_2.42740410299011 chr7 128235893 128238501 + 2.42740410299011 NA promoter-TSS (NM_146205) promoter-TSS (NM_146205) -160 NM_146205 233912 Mm.475117 NM_146205 ENSMUSG00000042178 Armc5 AW049683|BC032200 armadillo repeat containing 5 protein-coding unique_peak1_16_49_0.759680071199448_6.02369622537445_2.42722304086531-2 chr17 45753782 45754284 + 2.42722304086531 NA Intergenic Intergenic -20189 NM_028164 72240 Mm.482897 NM_028164 ENSMUSG00000094690 1600014C23Rik - RIKEN cDNA 1600014C23 gene protein-coding common_peak1_16_49_0.759680071199448_6.02369622537445_2.42722304086531-2 chr7 16325973 16326426 + 2.42722304086531 NA TTS (NM_019748) TTS (NM_019748) 16616 NM_133234 170770 Mm.7660 NM_133234 ENSMUSG00000002083 Bbc3 PUMA|PUMA/JFY1 BCL2 binding component 3 protein-coding unique_peak1_16_49_0.759680071199448_6.02369622537445_2.42722304086531 chr14 64866546 64866993 + 2.42722304086531 NA intron (NM_177338, intron 4 of 9) PB1D7|SINE|Alu 83078 NM_177338 219150 Mm.344074 NM_177338 ENSMUSG00000021972 Hmbox1 AI451877|AI604847|F830020C16Rik homeobox containing 1 protein-coding unique_peak1_16_49_0.759680071199448_6.02369622537445_2.42722304086531-3 chr9 123366961 123367422 + 2.42722304086531 NA intron (NM_153168, intron 1 of 20) intron (NM_153168, intron 1 of 20) 251 NM_153168 102436 Mm.276076 NM_153168 ENSMUSG00000035202 Lars2 AI035546|Kiaa0028|LEURS leucyl-tRNA synthetase, mitochondrial protein-coding common_peak1_16_49_0.759680071199448_6.02369622537445_2.42722304086531 chr11 87584329 87584791 + 2.42722304086531 NA intron (NM_001284394, intron 4 of 11) intron (NM_001284394, intron 4 of 11) 3499 NM_001284392 18952 Mm.2214 NM_011129 ENSMUSG00000020486 Sept4 ARTS|Bh5|OTTMUSG00000001265|Pnutl2 septin 4 protein-coding common_peak2_70_396_0.30016434870406_8.78307737149499_2.42710732866497 chr17 75551128 75552487 + 2.42710732866497 NA 5' UTR (NM_133747, exon 1 of 8) 5' UTR (NM_133747, exon 1 of 8) 139 NM_133747 72722 Mm.24641 NM_133747 ENSMUSG00000002017 Fam98a 2810405J04Rik|AL024114 family with sequence similarity 98, member A protein-coding common_peak1_244_2447_-0.132406018903646_11.1911848332408_2.42665893854329 chr2 167631025 167633075 + 2.42665893854329 NA promoter-TSS (NM_023230) promoter-TSS (NM_023230) -45 NM_023230 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak2_131_1194_-0.19225033283452_10.1266697364509_2.42596742541115 chr16 32245940 32247976 + 2.42596742541115 NA promoter-TSS (NM_026898) promoter-TSS (NM_026898) 67 NM_173439 268882 Mm.256137 NM_173439 ENSMUSG00000035764 Fbxo45 2610017J04Rik|AI463119|BC026799 F-box protein 45 protein-coding common_peak1_128_1163_-0.19501365650105_10.0873685146578_2.42588183672078 chr1 54911436 54913545 + 2.42588183672078 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 13897 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_51_258_0.365225268140733_8.19942092175692_2.42554110234844 chr16 76762458 76763970 + 2.42554110234844 NA Intergenic Intergenic 247667 NR_040573 76601 Mm.396217 NR_040573 ENSMUSG00000100857 1700041M19Rik - RIKEN cDNA 1700041M19 gene ncRNA common_peak1_51_258_0.365225268140733_8.19942092175692_2.42554110234844 chr17 33032816 33033677 + 2.42554110234844 NA intron (NM_028543, intron 1 of 3) intron (NM_028543, intron 1 of 3) 135 NM_028543 73451 Mm.129453 NM_028543 ENSMUSG00000067430 Zfp763 1700065O13Rik|AI839635 zinc finger protein 763 protein-coding common_peak1_14_40_0.824492116793264_5.76979806301472_2.42452383397919-4 chr7 84679665 84680073 + 2.42452383397919 NA promoter-TSS (NM_022985) promoter-TSS (NM_022985) -518 NM_022985 65098 Mm.209349 NM_022985 ENSMUSG00000030629 Zfand6 3110005P07Rik|Awp1|Za20d3 zinc finger, AN1-type domain 6 protein-coding common_peak1_14_40_0.824492116793264_5.76979806301472_2.42452383397919 chr1 92515599 92515953 + 2.42452383397919 NA intron (NM_147039, intron 1 of 1) intron (NM_147039, intron 1 of 1) 2739 NM_147039 259041 Mm.223424 NM_147039 ENSMUSG00000042849 Olfr1414 MOR103-2 olfactory receptor 1414 protein-coding unique_peak1_14_40_0.824492116793264_5.76979806301472_2.42452383397919 chr2 45090933 45091337 + 2.42452383397919 NA intron (NM_001289521, intron 1 of 8) intron (NM_001289521, intron 1 of 8) 19142 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak1_14_40_0.824492116793264_5.76979806301472_2.42452383397919-3 chr6 65596065 65596456 + 2.42452383397919 NA intron (NM_001001495, intron 3 of 7) intron (NM_001001495, intron 3 of 7) 5862 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak1_14_40_0.824492116793264_5.76979806301472_2.42452383397919-2 chr11 59844000 59844397 + 2.42452383397919 NA Intergenic Intergenic -3875 NM_134029 103850 Mm.41761 NM_134029 ENSMUSG00000032615 Nt5m 2010013E09Rik|AI846937|dNT-2 5',3'-nucleotidase, mitochondrial protein-coding unique_peak1_14_40_0.824492116793264_5.76979806301472_2.42452383397919-2 chr9 123058983 123059422 + 2.42452383397919 NA intron (NM_177911, intron 10 of 13) intron (NM_177911, intron 10 of 13) 24461 NM_177911 331046 Mm.195309 NM_177911 ENSMUSG00000025787 Tgm4 9530008N10Rik|Eapa1|TGP transglutaminase 4 (prostate) protein-coding common_peak1_62_336_0.325004378769924_8.55910697056682_2.42436034867895 chr3 146778574 146779772 + 2.42436034867895 NA intron (NM_011100, intron 1 of 9) intron (NM_011100, intron 1 of 9) 2243 NM_001164200 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak2_68_573_-0.282311606428893_9.02375112346124_2.42407368993695 chr10 39191818 39193557 + 2.42407368993695 NA Intergenic Intergenic -28893 NM_001127376 327743 Mm.208111 NM_001127376 ENSMUSG00000062074 Wisp3 CCN6|ENSMUSG00000062074|Gm735|WISP-3 WNT1 inducible signaling pathway protein 3 protein-coding common_peak1_50_251_0.37039085362754_8.16247535031369_2.4239350168127 chr6 29164112 29165027 + 2.4239350168127 NA exon (NM_133925, exon 1 of 19) exon (NM_133925, exon 1 of 19) 155 NM_133925 68272 Mm.40802 NM_026650 ENSMUSG00000029701 Rbm28 2810480G15Rik|AI503051 RNA binding motif protein 28 protein-coding common_peak2_90_554_0.256001081482578_9.24434450197876_2.42378000465491 chr3 88510257 88512235 + 2.42378000465491 NA Intergenic Intergenic -7894 NM_001002011 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_90_554_0.256001081482578_9.24434450197876_2.42378000465491 chr4 133574091 133575466 + 2.42378000465491 NA promoter-TSS (NM_172876) promoter-TSS (NM_172876) 33 NM_172876 242691 Mm.40110 NM_172876 ENSMUSG00000028850 Gpatch3 D930035B09Rik|Gpatc3 G patch domain containing 3 protein-coding common_peak1_89_772_-0.24153365517386_9.47355777633792_2.42376369016237 chr1 92805948 92806943 + 2.42376369016237 NA Intergenic Intergenic -25241 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak1_47_230_0.388638737862395_8.04606841034725_2.42349836504212 chr12 98282515 98283199 + 2.42349836504212 NA Intergenic Intergenic 14222 NM_008152 14744 Mm.378924 NM_008152 ENSMUSG00000021886 Gpr65 Dig1|Gpcr25|TDAG8 G-protein coupled receptor 65 protein-coding common_peak2_47_230_0.388638737862395_8.04606841034725_2.42349836504212 chr8 13907625 13908415 + 2.42349836504212 NA intron (NM_025785, intron 1 of 9) CpG 214 NM_025785 66822 Mm.37950 NM_025785 ENSMUSG00000038365 Fbxo25 9130015I06Rik|AI649137|Fbx25 F-box protein 25 protein-coding common_peak2_47_230_0.388638737862395_8.04606841034725_2.42349836504212-2 chr9 69289677 69291074 + 2.42349836504212 NA intron (NM_001289916, intron 1 of 9) CpG 534 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding common_peak1_30_123_0.512485894347432_7.21043925756059_2.42324913204533 chr7 45830669 45831136 + 2.42324913204533 NA promoter-TSS (NM_153419) promoter-TSS (NM_153419) -113 NM_153419 101612 Mm.274847 NM_153419 ENSMUSG00000053801 Grwd1 A301|AI504353|Grwd|Wdr28 glutamate-rich WD repeat containing 1 protein-coding unique_peak2_30_123_0.512485894347432_7.21043925756059_2.42324913204533 chr16 92806048 92807115 + 2.42324913204533 NA intron (NM_001111022, intron 2 of 6) IMPB_01|Satellite|Satellite 19493 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_49_244_0.37598956432017_8.12463272116266_2.42301999070875-2 chr7 120830465 120831539 + 2.42301999070875 NA Intergenic CpG -11829 NM_007908 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak2_49_244_0.37598956432017_8.12463272116266_2.42301999070875 chr1 192077964 192079384 + 2.42301999070875 NA intron (NM_011633, intron 1 of 9) intron (NM_011633, intron 1 of 9) 13925 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak2_627_7463_-0.0750330140733961_12.8282167638151_2.42257614845054 chr2 32711591 32717080 + 2.42257614845054 NA Intergenic Intergenic -1363 NR_039536 100628606 NR_039536 ENSMUSG00000105841 Mir3960 mmu-mir-3960 microRNA 3960 ncRNA common_peak2_306_2710_0.119581874062424_11.4644003348689_2.42223428907145 chr1 106710054 106715169 + 2.42223428907145 NA exon (NM_009741, exon 1 of 2) exon (NM_009741, exon 1 of 2) 1679 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak1_244_2029_0.137717811716467_11.0561229179308_2.42215936291506 chr6 134926463 134928990 + 2.42215936291506 NA Intergenic Intergenic -1366 NR_037956 381822 Mm.5935 NR_037955 ENSMUSG00000098318 Lockd 1190002F15Rik|AI120476|Droc lncRNA downstream of Cdkn1b ncRNA common_peak1_119_801_0.214422628515496_9.75466974071267_2.42183939872443 chr16 33184953 33185812 + 2.42183939872443 NA 5' UTR (NM_176840, exon 1 of 13) 5' UTR (NM_176840, exon 1 of 13) 311 NM_176840 106326 Mm.486405 NM_176840 ENSMUSG00000022807 Osbpl11 9430097N02Rik|AI132306|AU019795|ORP-11 oxysterol binding protein-like 11 protein-coding common_peak1_94_587_0.248797445438848_9.32407106755579_2.42183009369523 chr7 45915921 45917677 + 2.42183009369523 NA 3' UTR (NM_144801, exon 8 of 8) 3' UTR (NM_144801, exon 8 of 8) 4050 NM_001146346 13732 Mm.20829 NM_010129 ENSMUSG00000040212 Emp3 H-4|H4|HNMP-1|MI-35|Ymp epithelial membrane protein 3 protein-coding common_peak2_122_827_0.212090823719386_9.79953236935902_2.42142509734281 chr10 83543325 83544851 + 2.42142509734281 NA exon (NM_001033375, exon 1 of 33) exon (NM_001033375, exon 1 of 33) 147 NM_001033375 319277 Mm.491194 NM_001033375 ENSMUSG00000034560 Washc4 A230046K03Rik|AA589518|Kiaa1033|mKIAA1033 WASH complex subunit 4 protein-coding common_peak2_635_6827_0.0758535609413702_12.7751741234984_2.4210319232262 chr3 106784108 106791358 + 2.4210319232262 NA intron (NM_007651, intron 1 of 7) intron (NM_007651, intron 1 of 7) 2416 NM_007651 12508 Mm.316861 NM_007651 ENSMUSG00000040747 Cd53 AI323659|Ox-44|Tspan25 CD53 antigen protein-coding common_peak2_153_1426_-0.17543576751634_10.3910517357176_2.42082997910074 chr12 69510068 69514866 + 2.42082997910074 NA Intergenic Intergenic -36917 NR_038061 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak1_32_257_-0.433907307762374_7.79427360154207_2.42010362241776 chr11 103381665 103382122 + 2.42010362241776 NA intron (NM_183034, intron 5 of 11) intron (NM_183034, intron 5 of 11) -18201 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak1_41_191_0.419124454263699_7.79452472785301_2.42010362241776 chr11 11698977 11699837 + 2.42010362241776 NA intron (NM_001301866, intron 1 of 5) intron (NM_001301866, intron 1 of 5) 9230 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_321_2881_0.11575460437059_11.55073192236_2.41969365730174 chr19 5660141 5664550 + 2.41969365730174 NA intron (NM_001164480, intron 1 of 16) URR1A|DNA|hAT-Charlie 1362 NM_001164482 20469 Mm.3072 NM_011379 ENSMUSG00000056917 Sipa1 Spa1 signal-induced proliferation associated gene 1 protein-coding common_peak2_139_1277_-0.185001784050749_10.2271712289216_2.41958291928066 chr8 35494592 35496656 + 2.41958291928066 NA promoter-TSS (NM_026067) promoter-TSS (NM_026067) -91 NM_026067 67276 Mm.207534 NM_026067 ENSMUSG00000031527 Eri1 3'hexo|3110010F15Rik|Thex1|eri-1 exoribonuclease 1 protein-coding common_peak2_79_676_-0.258653173571508_9.27368543678924_2.41932908545901 chr19 18670207 18671946 + 2.41932908545901 NA exon (NM_026120, exon 1 of 8) exon (NM_026120, exon 1 of 8) 296 NM_026120 67383 Mm.306602 NM_026120 ENSMUSG00000024726 Carnmt1 2410127L17Rik carnosine N-methyltransferase 1 protein-coding common_peak2_239_2389_-0.134301536711339_11.1556441345124_2.41862460058078 chr9 37487951 37490281 + 2.41862460058078 NA promoter-TSS (NM_146222) promoter-TSS (NM_146222) -205 NM_146222 235184 Mm.127892 NM_146222 ENSMUSG00000042138 Msantd2 2810450G17Rik|9530092B10Rik Myb/SANT-like DNA-binding domain containing 2 protein-coding common_peak1_43_204_0.406929954374861_7.88294507669288_2.41769448894967 chr18 75446707 75447742 + 2.41769448894967 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -67421 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA common_peak1_43_204_0.406929954374861_7.88294507669288_2.41769448894967-2 chr6 127266310 127266912 + 2.41769448894967 NA Intergenic Intergenic 41356 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak1_25_95_0.570458743919776_6.87019187268104_2.41764904418595-3 chr7 58722114 58722580 + 2.41764904418595 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 64145 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_25_95_0.570458743919776_6.87019187268104_2.41764904418595-2 chr5 114806840 114807438 + 2.41764904418595 NA Intergenic PB1D9|SINE|Alu 6837 NR_027818 66236 Mm.268546 NR_027817 ENSMUSG00000072694 1500011B03Rik AI415201|AV141149|AW556386 RIKEN cDNA 1500011B03 gene ncRNA common_peak1_25_95_0.570458743919776_6.87019187268104_2.41764904418595 chr14 54653252 54653836 + 2.41764904418595 NA exon (NM_019567, exon 1 of 13) exon (NM_019567, exon 1 of 13) 141 NM_001242605 56215 Mm.297078 NM_019567 ENSMUSG00000022185 Acin1 2610036I19Rik|2610510L13Rik|Acinus|Acn|C79325|acinusL|acinusS|mKIAA0670 apoptotic chromatin condensation inducer 1 protein-coding common_peak1_256_2158_0.133454121134172_11.1428745885896_2.41760804964249 chr5 135167813 135169496 + 2.41760804964249 NA intron (NM_009745, intron 1 of 5) CpG 282 NM_009745 12054 Mm.405834 NM_009745 ENSMUSG00000029681 Bcl7b - B cell CLL/lymphoma 7B protein-coding common_peak2_332_3007_0.11346383184034_11.6113207675978_2.41752489462251 chr16 91405175 91408482 + 2.41752489462251 NA intron (NM_008349, intron 1 of 6) intron (NM_008349, intron 1 of 6) 593 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding common_peak1_104_919_-0.219909820267556_9.7355351408106_2.41746447895308 chr6 136467129 136468882 + 2.41746447895308 NA Intergenic Intergenic -50846 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak2_61_329_0.326972301674846_8.52980836508324_2.41721979948835 chr11 4986841 4987821 + 2.41721979948835 NA intron (NM_001243044, intron 1 of 21) intron (NM_001243044, intron 1 of 21) 507 NM_007454 11764 Mm.274816 NM_007454 ENSMUSG00000009090 Ap1b1 Adtb1|b2b1660Clo adaptor protein complex AP-1, beta 1 subunit protein-coding common_peak1_67_564_-0.285346173955666_8.99943397032472_2.41670129259037-2 chr16 17508195 17509127 + 2.41670129259037 NA promoter-TSS (NM_025808) promoter-TSS (NM_025808) -310 NM_025808 66863 Mm.161726 NM_025808 ENSMUSG00000022761 Lztr1 1200003E21Rik|AI591627|AW550890 leucine-zipper-like transcriptional regulator, 1 protein-coding common_peak2_67_564_-0.285346173955666_8.99943397032472_2.41670129259037 chr11 21548649 21550803 + 2.41670129259037 NA Intergenic ORR1F|LTR|ERVL-MaLR 22208 NM_008618 17449 Mm.212703 NM_008618 ENSMUSG00000020321 Mdh1 B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2 malate dehydrogenase 1, NAD (soluble) protein-coding common_peak2_67_564_-0.285346173955666_8.99943397032472_2.41670129259037-2 chr4 8811197 8813004 + 2.41670129259037 NA intron (NM_001277149, intron 7 of 37) intron (NM_001277149, intron 7 of 37) 121694 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_67_564_-0.285346173955666_8.99943397032472_2.41670129259037 chr11 32538233 32539665 + 2.41670129259037 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 5683 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_101_645_0.238892733619888_9.45483672150387_2.41614290472189 chr8 121186809 121188407 + 2.41614290472189 NA Intergenic Intergenic 59923 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak2_88_762_-0.242520878070343_9.45427880779936_2.41614290472189 chr7 44856494 44858394 + 2.41614290472189 NA promoter-TSS (NM_001290767) promoter-TSS (NM_001290767) 41 NM_001290767 59047 Mm.238254 NM_021549 ENSMUSG00000002963 Pnkp 1810009G08Rik|PNK polynucleotide kinase 3'- phosphatase protein-coding common_peak1_19_63_0.691134227630776_6.34556711381539_2.41475542144408 chr1 40324842 40325301 + 2.41475542144408 NA intron (NM_133193, intron 1 of 10) intron (NM_133193, intron 1 of 10) 444 NM_133193 107527 Mm.155583 NM_133193 ENSMUSG00000070942 Il1rl2 AI481289|AW551444|IL-1Rrp2 interleukin 1 receptor-like 2 protein-coding unique_peak2_19_63_0.691134227630776_6.34556711381539_2.41475542144408 chr7 68194172 68194667 + 2.41475542144408 NA intron (NM_010513, intron 11 of 20) intron (NM_010513, intron 11 of 20) 69814 NM_030101 78444 Mm.425468 NM_030101 ENSMUSG00000030553 Pgpep1l C330024D12Rik pyroglutamyl-peptidase I-like protein-coding common_peak1_19_63_0.691134227630776_6.34556711381539_2.41475542144408-2 chr7 142358818 142359374 + 2.41475542144408 NA intron (NM_177265, intron 2 of 3) intron (NM_177265, intron 2 of 3) 13163 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_19_63_0.691134227630776_6.34556711381539_2.41475542144408-3 chr9 73240436 73240779 + 2.41475542144408 NA Intergenic Intergenic 127138 NM_198609 225215 Mm.379366 NM_198609 ENSMUSG00000032215 Rsl24d1 2410159K22Rik ribosomal L24 domain containing 1 protein-coding common_peak1_33_265_-0.425133863340662_7.84271550383086_2.41378341181229 chr5 109795608 109796456 + 2.41378341181229 NA Intergenic Intergenic 38110 NR_027964 667213 Mm.454429 NR_027964 ENSMUSG00000105044 Gm10416 EG667213|ENSMUSG00000072761 zinc finger protein pseudogene pseudo common_peak1_78_666_-0.259443860071269_9.25182102114895_2.41333807652358 chr10 94198384 94199507 + 2.41333807652358 NA promoter-TSS (NM_025551) promoter-TSS (NM_025551) -64 NM_025551 66414 Mm.27886 NM_025551 ENSMUSG00000020022 Ndufa12 2410011G03Rik|AW112974 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 protein-coding common_peak2_255_2576_-0.128774313989027_11.2670896648651_2.41293402087693 chr10 93164984 93169402 + 2.41293402087693 NA intron (NM_146239, intron 1 of 16) PB1D10|SINE|Alu 4408 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak1_144_1330_-0.181525954521002_10.2875318786514_2.41281875457611 chr10 93452895 93454680 + 2.41281875457611 NA intron (NM_008517, intron 1 of 18) CpG 391 NM_008517 16993 Mm.271071 NM_008517 ENSMUSG00000015889 Lta4h - leukotriene A4 hydrolase protein-coding common_peak1_58_482_-0.310352973793949_8.7607028919388_2.41268052491696 chr17 5016912 5017789 + 2.41268052491696 NA intron (NM_001085355, intron 1 of 19) intron (NM_001085355, intron 1 of 19) 22276 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_118_792_0.215895314535665_9.73912471297181_2.41251303832149 chr17 22360908 22361827 + 2.41251303832149 NA promoter-TSS (NM_145484) promoter-TSS (NM_145484) 33 NM_176962 319615 Mm.442162 NM_176962 ENSMUSG00000033972 Zfp944 6330416L07Rik zinc finger protein 944 protein-coding common_peak2_257_2600_-0.128376686349402_11.2806623407683_2.41214397752343 chr3 135422335 135424817 + 2.41214397752343 NA promoter-TSS (NM_025902) promoter-TSS (NM_025902) -143 NM_025902 67006 Mm.269993 NM_025902 ENSMUSG00000028165 Cisd2 1500009M05Rik|1500026J14Rik|1500031D15Rik|AI848398|B630006A20Rik|Miner1|Naf-1|Noxp70|Zcd2 CDGSH iron sulfur domain 2 protein-coding common_peak2_93_579_0.249834308597441_9.30482624431366_2.41205706196764 chr2 135810764 135812687 + 2.41205706196764 NA intron (NM_013829, intron 2 of 36) intron (NM_013829, intron 2 of 36) 69895 NM_013829 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak1_27_216_-0.474986482426554_7.5240579912312_2.4116623384963 chr7 66186450 66187056 + 2.4116623384963 NA Intergenic B3A|SINE|B2 77238 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_226_1840_0.143670835637826_10.9181093291688_2.41150309277581 chr11 64014954 64020397 + 2.41150309277581 NA intron (NM_178379, intron 4 of 6) intron (NM_178379, intron 4 of 6) 53449 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak2_74_427_0.28868272188852_8.88580834734541_2.41118676531025 chr2 153214202 153216103 + 2.41118676531025 NA Intergenic MTE2b|LTR|ERVL-MaLR 10289 NM_198617 241732 Mm.277243 NM_198617 ENSMUSG00000074671 Tspyl3 AW212607|Gm36 TSPY-like 3 protein-coding common_peak2_170_1609_-0.164211737298521_10.5707391043527_2.41117519830033 chr2 65340776 65343634 + 2.41117519830033 NA intron (NM_177074, intron 7 of 11) intron (NM_177074, intron 7 of 11) 21821 NM_177074 320106 Mm.227703 NM_177074 ENSMUSG00000061171 Slc38a11 9330158F14Rik solute carrier family 38, member 11 protein-coding unique_peak2_17_138_-0.61425571085084_6.81181321729809_2.41065417147148 chr9 118374189 118374939 + 2.41065417147148 NA Intergenic Intergenic -55275 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak1_23_184_-0.517605992424217_7.2725784643042_2.41059304880968 chr12 25320258 25320877 + 2.41059304880968 NA Intergenic Intergenic 191393 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak2_23_184_-0.517605992424217_7.2725784643042_2.41059304880968 chr8 116644871 116646302 + 2.41059304880968 NA intron (NM_029441, intron 1 of 6) ORR1B2|LTR|ERVL-MaLR 87405 NM_029441 75796 Mm.159575 NM_029441 ENSMUSG00000031758 Cdyl2 1700029M19Rik|4930453I21Rik|Gm20194 chromodomain protein, Y chromosome-like 2 protein-coding common_peak1_23_184_-0.517605992424217_7.2725784643042_2.41059304880968-2 chr8 123039997 123040357 + 2.41059304880968 NA intron (NR_037865, intron 1 of 13) intron (NR_037865, intron 1 of 13) 2107 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_31_129_0.50049776128307_7.27261669366999_2.41059304880963 chr5 120503168 120503599 + 2.41059304880963 NA exon (NM_023625, exon 1 of 12) exon (NM_023625, exon 1 of 12) 240 NM_023625 71772 Mm.100065 NM_023625 ENSMUSG00000029598 Plbd2 1300012G16Rik|AU019810|P76 phospholipase B domain containing 2 protein-coding common_peak2_138_1266_-0.185216028348208_10.2145927949667_2.41043586722128 chr5 36795602 36797370 + 2.41043586722128 NA exon (NM_026242, exon 1 of 2) exon (NM_026242, exon 1 of 2) 268 NM_026242 67568 Mm.332336 NM_026242 ENSMUSG00000055302 Mrfap1 9130413I22Rik|AL022827|Pam14 Morf4 family associated protein 1 protein-coding common_peak2_34_273_-0.416586368436993_7.88973889874203_2.40877750101011 chr10 59381850 59383011 + 2.40877750101011 NA Intergenic IAPEz-int|LTR|ERVK -21255 NM_023530 69836 Mm.30268 NM_023530 ENSMUSG00000009646 Pla2g12b 2010002E04Rik|Fksg71|Pla2g13|hlb218 phospholipase A2, group XIIB protein-coding common_peak1_72_610_-0.272709543433102_9.11867379810218_2.40862485883244 chr15 12423661 12425148 + 2.40862485883244 NA intron (NM_001081064, intron 5 of 23) intron (NM_001081064, intron 5 of 23) 102908 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding common_peak1_111_731_0.224089534106595_9.62774460533734_2.40838555872786 chr17 53569235 53570888 + 2.40838555872786 NA intron (NM_020005, intron 1 of 17) intron (NM_020005, intron 1 of 17) 3090 NM_020005 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding common_peak2_251_2105_0.134544061298776_11.1075617516751_2.40833155906706 chr10 117893544 117900261 + 2.40833155906706 NA Intergenic Intergenic -28557 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_253_2126_0.134218687399727_11.1217136616605_2.40821984864791 chr2 69721838 69724018 + 2.40821984864791 NA promoter-TSS (NM_001081086) promoter-TSS (NM_001081086) -160 NM_001081086 228005 Mm.11815 NM_001081086 ENSMUSG00000042133 Ppig AU019516|AU022200|B230312B02Rik|CYP|SRCyp peptidyl-prolyl isomerase G (cyclophilin G) protein-coding common_peak1_336_3560_-0.108883905219432_11.7436247677533_2.40793707384556 chr18 80534376 80537114 + 2.40793707384556 NA Intergenic Intergenic 8801 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_123_1111_-0.199034245616488_10.0194239499153_2.40774369969649 chr16 14316571 14318150 + 2.40774369969649 NA promoter-TSS (NM_025345) promoter-TSS (NM_025345) -28 NM_025345 66086 Mm.42072 NM_025345 ENSMUSG00000022677 Fopnl 0610037P05Rik Fgfr1op N-terminal like protein-coding common_peak1_99_869_-0.225631776226995_9.65205570262259_2.40662818329552 chr14 73388128 73389838 + 2.40662818329552 NA Intergenic Intergenic -3712 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding unique_peak2_13_108_-0.708231885945356_6.41406838180425_2.40639809030508 chr19 4282629 4283409 + 2.40639809030508 NA 5' UTR (NM_026720, exon 1 of 15) 5' UTR (NM_026720, exon 1 of 15) 118 NM_026720 68423 Mm.23642 NM_026720 ENSMUSG00000005986 Ankrd13d 0710001P18Rik|AI430801 ankyrin repeat domain 13 family, member D protein-coding unique_peak2_13_108_-0.708231885945356_6.41406838180425_2.40639809030508-2 chr3 95588221 95588791 + 2.40639809030508 NA promoter-TSS (NM_001177670) promoter-TSS (NM_001177670) -428 NM_146133 229593 Mm.245830 NM_146133 ENSMUSG00000046519 Golph3l 2010204I15Rik|AU015439|AW549227|C77637|Gpp34r golgi phosphoprotein 3-like protein-coding common_peak2_82_704_-0.251973578117807_9.33549265822725_2.40542480339074 chr7 27573166 27575673 + 2.40542480339074 NA intron (NM_175107, intron 7 of 9) PB1D10|SINE|Alu 13943 NM_001122767 66367 Mm.29831 NM_175107 ENSMUSG00000049643 2310022A10Rik - RIKEN cDNA 2310022A10 gene protein-coding common_peak1_55_454_-0.316545673881777_8.67144989814517_2.40533362642027 chr3 89411228 89412162 + 2.40533362642027 NA intron (NM_177041, intron 1 of 7) intron (NM_177041, intron 1 of 7) 168 NM_177041 319945 Mm.258142 NM_177041 ENSMUSG00000042642 Flad1 A930017E24Rik|Pp591 flavin adenine dinucleotide synthetase 1 protein-coding common_peak1_73_419_0.292150444731643_8.86032074003194_2.4051611211234 chr19 29361276 29362338 + 2.4051611211234 NA promoter-TSS (NM_026362) promoter-TSS (NM_026362) 64 NM_026362 67759 Mm.275511 NM_026362 ENSMUSG00000016495 Plgrkt 1110007H22Rik|5033414D02Rik|AI852040|Plg-R(KT)|Plg-RKT plasminogen receptor, C-terminal lysine transmembrane protein protein-coding common_peak1_106_938_-0.216010928298001_9.76697588350477_2.40480239116755 chr11 95414093 95415310 + 2.40480239116755 NA intron (NM_025287, intron 2 of 10) intron (NM_025287, intron 2 of 10) 618 NM_025287 20747 Mm.285454 NM_025287 ENSMUSG00000057522 Spop AI315626|Pcif1|TEF2 speckle-type POZ protein protein-coding common_peak1_71_600_-0.273311196465807_9.09456558247828_2.40414022024595 chr15 8098435 8099402 + 2.40414022024595 NA intron (NM_001081402, intron 2 of 17) CpG 291 NM_001081402 545085 Mm.321312 NM_198413 ENSMUSG00000039828 Wdr70 4833422F06Rik WD repeat domain 70 protein-coding common_peak2_270_2753_-0.123845310787557_11.3653901887412_2.40224242041862 chr7 125487619 125492509 + 2.40224242041862 NA intron (NM_026330, intron 1 of 7) L1ME3E|LINE|L1 1478 NM_026330 67711 Mm.4467 NM_026330 ENSMUSG00000030750 Nsmce1 2510027N19Rik NSE1 homolog, SMC5-SMC6 complex component protein-coding common_peak2_107_697_0.228348963002654_9.56125770771098_2.40178341398936 chr1 155058000 155060616 + 2.40178341398936 NA Intergenic Intergenic 40328 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak2_78_458_0.279748747699509_8.98222471726356_2.40117534917382-2 chr6 34176251 34177220 + 2.40117534917382 NA intron (NM_021435, intron 1 of 9) CpG 319 NM_021435 58246 Mm.245527 NM_021435 ENSMUSG00000018999 Slc35b4 4930474D06Rik|AB041549|AW494345 solute carrier family 35, member B4 protein-coding common_peak2_78_458_0.279748747699509_8.98222471726356_2.40117534917382 chr14 119006550 119008303 + 2.40117534917382 NA intron (NM_001081252, intron 33 of 38) ORR1D2|LTR|ERVL-MaLR 69494 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding common_peak1_32_135_0.489857106410541_7.33239139445561_2.40030285111549-2 chr7 126775270 126775920 + 2.40030285111549 NA TTS (NM_024228) TTS (NM_024228) -1380 NM_026875 66090 Mm.27114 NM_025347 ENSMUSG00000042675 Ypel3 0610043B10Rik|1190001G19Rik|Suap yippee-like 3 (Drosophila) protein-coding common_peak1_32_135_0.489857106410541_7.33239139445561_2.40030285111549 chr14 121369356 121369893 + 2.40030285111549 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 9606 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding unique_peak2_32_135_0.489857106410541_7.33239139445561_2.40030285111549 chr3 94412469 94413632 + 2.40030285111549 NA promoter-TSS (NM_028307) promoter-TSS (NM_028307) -268 NM_028307 72634 Mm.331198 NM_028307 ENSMUSG00000041912 Tdrkh 2700091C21Rik|Tdrd2 tudor and KH domain containing protein protein-coding common_peak2_66_366_0.31090744730651_8.67508997649647_2.40018717407202 chr5 115340630 115341932 + 2.40018717407202 NA promoter-TSS (NM_029645) promoter-TSS (NM_029645) 34 NM_026933 69076 Mm.27951 NM_026933 ENSMUSG00000029535 Triap1 1810015M01Rik|AU020874|AU043831|P53csv|Wf-1 TP53 regulated inhibitor of apoptosis 1 protein-coding common_peak1_64_536_-0.291863757652516_8.92284639915916_2.40002712358844 chr2 83644531 83645266 + 2.40002712358844 NA intron (NM_026934, intron 1 of 9) L1MDb|LINE|L1 320 NM_026934 69082 Mm.27804 NM_026934 ENSMUSG00000027091 Zc3h15 1700006A17Rik|1810012H02Rik|2610312B22Rik|FM22|Ierepo4 zinc finger CCCH-type containing 15 protein-coding common_peak1_53_436_-0.322669591474648_8.61015467376328_2.39907937672349 chr11 119392660 119393455 + 2.39907937672349 NA Intergenic Intergenic 2585 NR_035453 100316690 NR_035453 ENSMUSG00000088015 Mir1932 mir-1932|mmu-mir-1932 microRNA 1932 ncRNA common_peak2_22_79_0.616532709206147_6.63019444949044_2.39898141056092 chrX 160994770 160995353 + 2.39898141056092 NA promoter-TSS (NM_001024624) promoter-TSS (NM_001024624) -380 NM_001024624 382253 Mm.443717 NM_001024624 ENSMUSG00000031292 Cdkl5 BC038161|Stk9 cyclin-dependent kinase-like 5 protein-coding unique_peak2_15_123_-0.657943047261707_6.62522478675602_2.39898141056092 chrX 7657162 7657882 + 2.39898141056092 NA intron (NM_001290624, intron 1 of 8) intron (NM_001290624, intron 1 of 8) 143 NM_001290624 54630 Mm.232232 NM_175097 ENSMUSG00000031145 Prickle3 Lmo6|Sfc16 prickle planar cell polarity protein 3 protein-coding common_peak1_22_79_0.616532709206147_6.63019444949044_2.39898141056092 chr7 119866143 119866623 + 2.39898141056092 NA intron (NM_001163703, intron 1 of 2) intron (NM_001163703, intron 1 of 2) 29075 NM_173408 233805 Mm.31539 NM_173408 ENSMUSG00000048787 Dcun1d3 1700020A13Rik|BC030335 DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) protein-coding common_peak2_58_308_0.334063377137451_8.4384947164731_2.3976994006278-3 chr18 67390506 67392339 + 2.3976994006278 NA exon (NM_026473, exon 2 of 4) exon (NM_026473, exon 2 of 4) 691 NM_026473 67951 Mm.181860 NM_026473 ENSMUSG00000001473 Tubb6 2310057H16Rik|BB220206 tubulin, beta 6 class V protein-coding common_peak2_58_308_0.334063377137451_8.4384947164731_2.3976994006278 chr10 79416672 79417929 + 2.3976994006278 NA Intergenic IAPLTR3-int|LTR|ERVK -51658 NM_001104537 625029 Mm.469865 NM_001104537 ENSMUSG00000091381 Vmn2r83 EG625029 vomeronasal 2, receptor 83 protein-coding common_peak2_58_308_0.334063377137451_8.4384947164731_2.3976994006278-2 chr16 17131548 17132893 + 2.3976994006278 NA exon (NM_022324, exon 1 of 3) exon (NM_022324, exon 1 of 3) 163 NM_022324 64136 Mm.30222 NM_022324 ENSMUSG00000022769 Sdf2l1 - stromal cell-derived factor 2-like 1 protein-coding common_peak1_20_161_-0.562375359086126_7.05866232334156_2.39764240217155 chr2 45115568 45116070 + 2.39764240217155 NA Intergenic Intergenic -2540 NM_015753 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak1_20_161_-0.562375359086126_7.05866232334156_2.39764240217155-2 chr4 132638499 132638998 + 2.39764240217155 NA promoter-TSS (NM_010166) promoter-TSS (NM_010166) -298 NM_210071 14050 Mm.227733 NM_010166 ENSMUSG00000028886 Eya3 AI844637 EYA transcriptional coactivator and phosphatase 3 protein-coding common_peak2_20_161_-0.562375359086126_7.05866232334156_2.39764240217155 chr13 21530591 21531277 + 2.39764240217155 NA intron (NM_001251833, intron 1 of 3) CpG 180 NM_139141 93681 Mm.290601 NM_139141 ENSMUSG00000063894 Zkscan8 2510038J07Rik|D430019P06Rik|LD5-1|Zfp192 zinc finger with KRAB and SCAN domains 8 protein-coding common_peak2_28_224_-0.465117876704469_7.5812222528648_2.39763048000359 chr11 67514746 67515989 + 2.39763048000359 NA Intergenic Intergenic -17631 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_161_1511_-0.169288030041837_10.4775984092002_2.39734759803239 chr2 105398150 105399944 + 2.39734759803239 NA exon (NM_009037, exon 1 of 6) exon (NM_009037, exon 1 of 6) 272 NM_009037 19672 Mm.4876 NM_009037 ENSMUSG00000005973 Rcn1 Rcn reticulocalbin 1 protein-coding common_peak1_161_1511_-0.169288030041837_10.4775984092002_2.39734759803239-2 chr3 19627871 19629683 + 2.39734759803239 NA Intergenic Intergenic -15683 NM_001081281 381485 Mm.35419 NM_001081281 ENSMUSG00000060913 Trim55 D830041C10Rik|Murf2|Rnf29 tripartite motif-containing 55 protein-coding common_peak1_52_427_-0.325725220958034_8.57860437592213_2.39659555352713 chr11 11736217 11736992 + 2.39659555352713 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 46427 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_87_530_0.26045431426251_9.18279520793541_2.39643158746325 chr13 95524220 95525401 + 2.39643158746325 NA intron (NM_007974, intron 1 of 1) CpG 430 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak2_154_1122_0.181645579212026_10.2239650020066_2.39633067552326 chr3 108571019 108572597 + 2.39633067552326 NA intron (NM_025444, intron 1 of 3) CpG 109 NM_025444 99730 Mm.24431 NM_025444 ENSMUSG00000048100 Taf13 1810004N01Rik|2010309N11Rik|AI847295|TAFII18 TATA-box binding protein associated factor 13 protein-coding unique_peak2_10_86_-0.809758064341132_6.03806446367816_2.39518489136358 chr16 91490478 91491043 + 2.39518489136358 NA intron (NM_010508, intron 2 of 10) B3|SINE|B2 5545 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 CD118|Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding unique_peak2_10_86_-0.809758064341132_6.03806446367816_2.39518489136358-2 chr19 10880230 10880892 + 2.39518489136358 NA intron (NM_134142, intron 1 of 3) intron (NM_134142, intron 1 of 3) 1182 NM_134142 68539 Mm.251890 NM_134142 ENSMUSG00000034659 Tmem109 1110006I15Rik|AA958958|C77652 transmembrane protein 109 protein-coding unique_peak2_10_86_-0.809758064341132_6.03806446367816_2.39518489136358-3 chr7 77132921 77133785 + 2.39518489136358 NA Intergenic Intergenic 903466 NM_001199224 244071 Mm.322829 NM_172902 ENSMUSG00000025754 Agbl1 Ccp4|D430020F16|EG244071|Nna1-l1 ATP/GTP binding protein-like 1 protein-coding common_peak1_72_412_0.292321054966182_8.83615849890254_2.39479919904776 chr6 31078527 31079808 + 2.39479919904776 NA Intergenic Intergenic -16074 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_142_1308_-0.182059035362814_10.2632198642638_2.39413619334066 chr10 128458144 128460601 + 2.39413619334066 NA TTS (NR_106183) TTS (NR_106183) 136 NM_001114097 68094 Mm.417338 NM_198160 ENSMUSG00000025369 Smarcc2 5930405J04Rik SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 protein-coding common_peak1_158_1478_-0.17053005550267_10.4451413093477_2.394065580902 chr11 87470481 87471893 + 2.394065580902 NA intron (NM_031386, intron 2 of 30) CpG 43596 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak2_143_1019_0.190168858572877_10.0894378661453_2.39396806497692 chr5 38259486 38261157 + 2.39396806497692 NA promoter-TSS (NM_025480) promoter-TSS (NM_025480) -54 NM_025480 66309 Mm.256185 NM_025480 ENSMUSG00000067365 Tmem128 2810021O14Rik transmembrane protein 128 protein-coding common_peak1_36_290_-0.405091691696873_7.98232949705985_2.39394714592947 chr7 118277174 118277761 + 2.39394714592947 NA Intergenic Intergenic 33560 NR_027879 67745 Mm.483404 NM_183267 ENSMUSG00000055159 4930583K01Rik - RIKEN cDNA 4930583K01 gene ncRNA common_peak2_139_1276_-0.183872472806478_10.2266065732995_2.39283382274611 chr12 21478904 21481703 + 2.39283382274611 NA Intergenic Intergenic -62867 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_56_293_0.34482637471381_8.37208553219327_2.39277750884971 chr5 32147721 32148903 + 2.39277750884971 NA intron (NM_008037, intron 2 of 3) MIR3|SINE|MIR 11840 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_37_298_-0.397025159614858_8.02548909439068_2.39245970868966 chr6 34878221 34878685 + 2.39245970868966 NA promoter-TSS (NM_199145) promoter-TSS (NM_199145) -388 NM_001135611 78412 Mm.248440 NM_199145 ENSMUSG00000046806 3110062M04Rik AL023049|Mri RIKEN cDNA 3110062M04 gene protein-coding common_peak2_101_888_-0.221756520515957_9.68516134857179_2.39241666046118 chr11 53706451 53707897 + 2.39241666046118 NA 5' UTR (NM_009012, exon 1 of 25) 5' UTR (NM_009012, exon 1 of 25) 145 NM_009012 19360 Mm.4888 NM_009012 ENSMUSG00000020380 Rad50 Mrell|Rad50l RAD50 double strand break repair protein protein-coding common_peak1_82_490_0.269926654853656_9.07454254174152_2.3921187442958 chr14 60715310 60716622 + 2.3921187442958 NA intron (NM_001033272, intron 4 of 12) ORR1D2-int|LTR|ERVL-MaLR -16938 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak2_33_141_0.480401452655845_7.38994784583261_2.39210339110047 chr1 166380931 166382055 + 2.39210339110047 NA intron (NM_030245, intron 1 of 7) intron (NM_030245, intron 1 of 7) 2326 NM_030245 27878 Mm.100665 NM_030245 ENSMUSG00000026563 Tada1 2900026B15Rik|D1Ertd251e|Staf42|Tada1l transcriptional adaptor 1 protein-coding common_peak1_33_141_0.480401452655845_7.38994784583261_2.39210339110047 chr13 114845547 114846150 + 2.39210339110047 NA exon (NM_008396, exon 26 of 30) exon (NM_008396, exon 26 of 30) 27611 NM_001113374 17434 Mm.19027 NM_013826 ENSMUSG00000015536 Mocs2 AI415403 molybdenum cofactor synthesis 2 protein-coding common_peak2_69_581_-0.276817317198393_9.04646668430909_2.39195993488968 chr9 96398812 96400440 + 2.39195993488968 NA Intergenic Intergenic -35327 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak1_69_581_-0.276817317198393_9.04646668430909_2.39195993488968 chr7 28391937 28392776 + 2.39195993488968 NA promoter-TSS (NM_019458) promoter-TSS (NM_019458) 334 NM_026042 67224 Mm.41647 NM_026042 ENSMUSG00000003444 Med29 2810405O22Rik|AU020902|Ixl mediator complex subunit 29 protein-coding common_peak2_38_306_-0.389151395762318_8.06751914748902_2.39186448714768 chr13 34666930 34668272 + 2.39186448714768 NA TTS (NR_105041) TTS (NR_105041) 14678 NR_105041 101056149 Mm.421309 NR_105041 ENSMUSG00000086786 Gm15908 OTTMUSG00000027716 predicted gene 15908 ncRNA common_peak2_65_359_0.312079162517563_8.64789267758846_2.39153268552221 chrX 42498943 42501508 + 2.39153268552221 NA Intergenic Intergenic -2340 NM_011364 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak2_116_775_0.217165123574018_9.70849540397414_2.39150303897691 chr2 132686471 132689197 + 2.39150303897691 NA Intergenic Intergenic -2449 NM_028637 73747 Mm.284114 NM_028637 ENSMUSG00000044991 1110034G24Rik - RIKEN cDNA 1110034G24 gene protein-coding common_peak1_469_5280_-0.0887464405807457_12.3222222057811_2.39093844049353 chr15 8443000 8446604 + 2.39093844049353 NA promoter-TSS (NM_027707) promoter-TSS (NM_027707) -339 NM_201232 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 Nipped-B homolog (Drosophila) protein-coding common_peak2_356_3810_-0.104747006419242_11.8435803896025_2.3907528981646 chr8 70607496 70612160 + 2.3907528981646 NA Intergenic CpG -1514 NM_133772 76900 Mm.6667 NM_133772 ENSMUSG00000070003 Ssbp4 1210002E11Rik|AW743380|Sspb4 single stranded DNA binding protein 4 protein-coding common_peak2_136_1245_-0.186750796489143_10.1897129547794_2.39041654005076 chr6 48601336 48603279 + 2.39041654005076 NA Intergenic Intergenic 8424 NM_001079904 58887 Mm.219183 NM_175099 ENSMUSG00000052751 Repin1 AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 replication initiator 1 protein-coding common_peak1_240_2399_-0.132967195241232_11.1623350928753_2.38898550533147 chr4 135352392 135354447 + 2.38898550533147 NA promoter-TSS (NM_001130477) promoter-TSS (NM_001130477) -205 NM_001130477 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak1_204_1614_0.152230402362459_10.7334336507625_2.38882904920999 chr12 104235185 104237363 + 2.38882904920999 NA intron (NM_009251, intron 2 of 5) intron (NM_009251, intron 2 of 5) -11622 NR_033450 546546 Mm.390522 NM_001034870 Serpina3h 6C28|Spi2 serine (or cysteine) peptidase inhibitor, clade A, member 3H pseudo common_peak2_296_3066_-0.117023471299571_11.5241007156172_2.38848047859618 chr4 137387127 137389474 + 2.38848047859618 NA Intergenic CpG 21491 NM_001126318 242711 Mm.475541 NM_001126318 ENSMUSG00000078520 Cela3a Gm13011|OTTMUSG00000009877 chymotrypsin-like elastase family, member 3A protein-coding common_peak2_55_286_0.348270134528594_8.33904199393998_2.38791461654237 chr16 14087629 14089349 + 2.38791461654237 NA intron (NM_144518, intron 2 of 5) intron (NM_144518, intron 2 of 5) 70785 NM_001081154 223989 Mm.85442 NM_001081154 ENSMUSG00000060657 Marf1 4921513D23Rik|BC031575|C87306|E030019O05|Lkap|mKIAA0430 meiosis arrest female 1 protein-coding common_peak1_24_192_-0.506441845131697_7.33923611470223_2.38737528545014-4 chr15 99651169 99651758 + 2.38737528545014 NA intron (NM_012025, intron 1 of 17) CpG 193 NM_001253808 26934 Mm.273804 NM_012025 ENSMUSG00000023015 Racgap1 AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478 Rac GTPase-activating protein 1 protein-coding common_peak1_24_192_-0.506441845131697_7.33923611470223_2.38737528545014-5 chr17 25823658 25824189 + 2.38737528545014 NA 5' UTR (NM_173741, exon 1 of 9) 5' UTR (NM_173741, exon 1 of 9) 296 NM_173741 268933 Mm.95512 NM_173741 ENSMUSG00000025737 Wdr24 BC037651 WD repeat domain 24 protein-coding common_peak1_24_192_-0.506441845131697_7.33923611470223_2.38737528545014 chr1 54853855 54854354 + 2.38737528545014 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 72283 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_24_192_-0.506441845131697_7.33923611470223_2.38737528545014-7 chr6 124756696 124757149 + 2.38737528545014 NA promoter-TSS (NM_007881) promoter-TSS (NM_007881) -435 NM_007881 13498 Mm.333380 NM_007881 ENSMUSG00000004263 Atn1 Atr1|Drpla|atrophin-1 atrophin 1 protein-coding common_peak1_24_192_-0.506441845131697_7.33923611470223_2.38737528545014-3 chr10 8415247 8415712 + 2.38737528545014 NA intron (NM_177387, intron 1 of 7) intron (NM_177387, intron 1 of 7) 103346 NM_177387 338362 Mm.41163 NM_177387 ENSMUSG00000047712 Ust D930010O20Rik|UA2OST uronyl-2-sulfotransferase protein-coding common_peak1_24_192_-0.506441845131697_7.33923611470223_2.38737528545014-2 chr1 134556552 134557067 + 2.38737528545014 NA Intergenic CpG -3369 NM_152895 75605 Mm.28995 NM_152895 ENSMUSG00000042207 Kdm5b 2010009J12Rik|2210016I17Rik|AW556288|D1Ertd202e|Jarid1b|PLU-1|PUT1|Plu1|RBBP2H1A|Rb-Bp2|mKIAA4034 lysine (K)-specific demethylase 5B protein-coding common_peak1_24_192_-0.506441845131697_7.33923611470223_2.38737528545014-6 chr4 88773361 88773970 + 2.38737528545014 NA promoter-TSS (NM_001161609).4 promoter-TSS (NM_001161609).4 -169 NM_001243155 545646 Mm.380019 NM_001243155 ENSMUSG00000094271 Gm13290 OTTMUSG00000011291 predicted gene 13290 protein-coding common_peak2_50_410_-0.335323806554227_8.51533268040457_2.38735432919475 chr7 143295250 143296632 + 2.38735432919475 NA non-coding (NR_001461, exon 1 of 1) non-coding (NR_001461, exon 1 of 1) 606 NR_001461 63830 Mm.356096 NR_001461 ENSMUSG00000101609 Kcnq1ot1 Kvlqt1-as|Lit1|Tssc8 KCNQ1 overlapping transcript 1 ncRNA common_peak1_50_410_-0.335323806554227_8.51533268040457_2.38735432919475 chr2 155135330 155136239 + 2.38735432919475 NA intron (NM_001243712, intron 1 of 25) B1_Mur1|SINE|Alu 2303 NM_008395 16396 Mm.208286 NM_008395 ENSMUSG00000027598 Itch 6720481N21Rik|8030492O04Rik|A130065M08|AIP4|C230047C07Rik itchy, E3 ubiquitin protein ligase protein-coding common_peak2_128_882_0.203592058758767_9.88806565702785_2.38678493466384 chr12 87387116 87389108 + 2.38678493466384 NA exon (NM_011479, exon 1 of 12) exon (NM_011479, exon 1 of 12) 243 NM_011479 20773 Mm.565 NM_011479 ENSMUSG00000021036 Sptlc2 LCB2|LCB2a|Spt2 serine palmitoyltransferase, long chain base subunit 2 protein-coding common_peak1_49_401_-0.338424187856187_8.48183959725083_2.38624226851671 chr10 77609056 77609762 + 2.38624226851671 NA intron (NM_001301671, intron 1 of 3) intron (NM_001301671, intron 1 of 3) 2811 NM_001301671 20610 Mm.24433 NM_019929 ENSMUSG00000020265 Sumo3 2810014B19Rik|D10Ertd345e|SMT3A|SUMO-3|Smt3h1 small ubiquitin-like modifier 3 protein-coding unique_peak2_9_78_-0.839258831732684_5.88415133231076_2.38608689960013-2 chr8 122917364 122918026 + 2.38608689960013 NA intron (NR_037865, intron 2 of 13) B4A|SINE|B4 69321 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding unique_peak2_9_78_-0.839258831732684_5.88415133231076_2.38608689960013 chr1 54919605 54920436 + 2.38608689960013 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 6367 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_27_106_0.545097763616779_7.01401586820954_2.38580959521541 chr19 5274268 5274899 + 2.38580959521541 NA intron (NM_030109, intron 20 of 20) intron (NM_030109, intron 20 of 20) -1464 NM_153129 107975 Mm.234923 NM_153129 ENSMUSG00000024855 Pacs1 AI325977 phosphofurin acidic cluster sorting protein 1 protein-coding common_peak1_27_106_0.545097763616779_7.01401586820954_2.38580959521541-2 chr4 127125999 127126467 + 2.38580959521541 NA intron (NM_001099319, intron 1 of 2) CpG 190 NM_001099319 100039968 Mm.392655 NM_001099319 ENSMUSG00000070737 Tmem35b Gm12942|OTTMUSG00000009332|Zmym6nb transmembrane protein 35B protein-coding common_peak2_190_1473_0.158850696891724_10.6049461575409_2.38578032559499 chr7 80533763 80536028 + 2.38578032559499 NA 5' UTR (NM_007550, exon 1 of 22) 5' UTR (NM_007550, exon 1 of 22) 103 NM_007550 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding common_peak2_34_147_0.471992348894584_7.44544954007624_2.38576064949473 chr8 128689891 128690933 + 2.38576064949473 NA intron (NM_010578, intron 1 of 15) B3|SINE|B2 4758 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_29_232_-0.455529712056577_7.63642128862599_2.38574404162278 chr5 34514107 34514641 + 2.38574404162278 NA promoter-TSS (NM_139064) promoter-TSS (NM_139064) -395 NM_139064 231130 Mm.28615 NM_139064 ENSMUSG00000059866 Tnip2 1810020H16Rik|ABIN-2|AI428870 TNFAIP3 interacting protein 2 protein-coding common_peak2_145_1038_0.187951398667774_10.1149556382381_2.38565960105807 chr6 108534578 108538279 + 2.38565960105807 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 46685 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_177_1684_-0.158902196118676_10.6390817780099_2.3847968592278 chr17 64599950 64602515 + 2.3847968592278 NA promoter-TSS (NM_008549) promoter-TSS (NM_008549) -417 NM_008549 17158 Mm.2433 NM_008549 ENSMUSG00000024085 Man2a1 Mana-2|Mana2|Map-2 mannosidase 2, alpha 1 protein-coding common_peak2_39_315_-0.38603420935997_8.11076364349712_2.38453687972304 chr5 64102268 64103484 + 2.38453687972304 NA exon (NM_025700, exon 4 of 14) exon (NM_025700, exon 4 of 14) 9926 NM_025700 66681 Mm.2325 NM_025700 ENSMUSG00000029171 Pgm1 3230402E02Rik|Pgm-1|Pgm2 phosphoglucomutase 1 protein-coding common_peak2_68_572_-0.279796008510111_9.02249332450185_2.38417668620179 chr12 3282134 3285702 + 2.38417668620179 NA intron (NM_016676, intron 1 of 5) intron (NM_016676, intron 1 of 5) 26051 NM_016676 19325 Mm.378993 NM_016676 ENSMUSG00000020671 Rab10 AW107754 RAB10, member RAS oncogene family protein-coding common_peak2_74_628_-0.266766498589622_9.16353295758448_2.38389705155954 chr16 3871580 3873316 + 2.38389705155954 NA promoter-TSS (NM_001033159) promoter-TSS (NM_001033159) -74 NM_001033159 71063 Mm.379190 NM_001033159 ENSMUSG00000039789 Zfp597 4933407K12Rik|AI462383|AI666357 zinc finger protein 597 protein-coding common_peak1_208_1655_0.150258659025418_10.768616287012_2.38387405064605 chr11 115512006 115514430 + 2.38387405064605 NA intron (NM_008258, intron 1 of 4) intron (NM_008258, intron 1 of 4) 1152 NM_008258 15374 Mm.1775 NM_008258 ENSMUSG00000020737 Hn1 - hematological and neurological expressed sequence 1 protein-coding common_peak1_172_1629_-0.161445717625892_10.5899333903055_2.38379543222516 chr13 6633785 6636789 + 2.38379543222516 NA intron (NM_001291071, intron 2 of 21) intron (NM_001291071, intron 2 of 21) 13484 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding common_peak1_84_723_-0.248204039230714_9.37574386746785_2.38361334759071 chr1 171843880 171845319 + 2.38361334759071 NA intron (NM_001289470, intron 2 of 8) MIR|SINE|MIR 4902 NM_013489 12523 Mm.259115 NM_013489 ENSMUSG00000038147 Cd84 A130013D22Rik|CDw84|SLAMF5 CD84 antigen protein-coding common_peak2_54_279_0.352008001440948_8.30528701766544_2.38350755095125 chr16 84734573 84736029 + 2.38350755095125 NA promoter-TSS (NM_017404) promoter-TSS (NM_017404) 1 NM_017404 27393 Mm.103655 NM_017404 ENSMUSG00000022889 Mrpl39 C21orf8|MRP-L5|ORF22|Rpml5 mitochondrial ribosomal protein L39 protein-coding common_peak1_42_340_-0.367900758770222_8.22967754963906_2.38310493754727 chr5 106964101 106964876 + 2.38310493754727 NA promoter-TSS (NM_001271566) promoter-TSS (NM_001271566) -73 NM_001271566 12545 Mm.20842 NM_009863 ENSMUSG00000029283 Cdc7 AI597260|Cdc7l1|muCdc7 cell division cycle 7 (S. cerevisiae) protein-coding common_peak2_191_1839_-0.151877649293212_10.7695512262978_2.38268105987549 chr11 46388019 46390941 + 2.38268105987549 NA promoter-TSS (NM_010583) promoter-TSS (NM_010583) 35 NM_001281968 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding common_peak1_192_1493_0.157840859657021_10.6238848626177_2.38257306643587 chr2 35199865 35201197 + 2.38257306643587 NA intron (NM_026697, intron 1 of 7) CpG 589 NM_026697 68365 Mm.198264 NM_026697 ENSMUSG00000026878 Rab14 0610030G24Rik|2810475J17Rik|A830021G03Rik|AI314285|AI649155|D030017L14Rik RAB14, member RAS oncogene family protein-coding common_peak2_210_1675_0.149792905439611_10.7857028864192_2.38225867426569 chr2 27539227 27540938 + 2.38225867426569 NA Intergenic Intergenic 24935 NM_080848 140858 Mm.28265 NM_080848 ENSMUSG00000026917 Wdr5 2410008O07Rik|AA408785|AA960360|Big|Big-3 WD repeat domain 5 protein-coding common_peak1_18_145_-0.589460355483127_6.89509438113845_2.38218892698016 chrX 152341987 152342399 + 2.38218892698016 NA exon (NM_029836, exon 1 of 7) exon (NM_029836, exon 1 of 7) 291 NM_029836 52808 Mm.9997 NM_029836 ENSMUSG00000041096 Tspyl2 CDA1|CINAP|DENTT|DXBwg1396e|DXHXS1008E|E130307F10Rik TSPY-like 2 protein-coding common_peak1_45_366_-0.354563137563348_8.34235468406154_2.38149140863065 chr1 179517495 179518270 + 2.38149140863065 NA exon (NM_027188, exon 1 of 12) exon (NM_027188, exon 1 of 12) 121 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding common_peak1_23_84_0.604384531954393_6.7115832021149_2.38109619744203-2 chr11 68431258 68431723 + 2.38109619744203 NA promoter-TSS (NM_177320) promoter-TSS (NM_177320) -635 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak2_23_84_0.604384531954393_6.7115832021149_2.38109619744203 chr13 43172650 43173301 + 2.38109619744203 NA Intergenic MTC|LTR|ERVL-MaLR -1474 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding unique_peak2_23_84_0.604384531954393_6.7115832021149_2.38109619744203 chr6 140511963 140512657 + 2.38109619744203 NA intron (NM_144920, intron 3 of 30) MIR|SINE|MIR 88211 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak1_23_84_0.604384531954393_6.7115832021149_2.38109619744203-3 chr14 47417831 47418268 + 2.38109619744203 NA intron (NM_144553, intron 1 of 18) ID_B1|SINE|B4 358 NM_144553 218977 Mm.240543 NM_144553 ENSMUSG00000037544 Dlgap5 C77459|C86398|Dap-5|Dlg7|Hurp|mKIAA0008 discs, large (Drosophila) homolog-associated protein 5 protein-coding common_peak1_23_84_0.604384531954393_6.7115832021149_2.38109619744203 chr10 19612986 19613540 + 2.38109619744203 NA Intergenic MTE-int|LTR|ERVL-MaLR -8765 NM_178258 237310 Mm.331979 NM_178258 ENSMUSG00000039760 Il22ra2 CRF2-10|CRF2-s1|CRF2X|Il-22bp interleukin 22 receptor, alpha 2 protein-coding common_peak1_23_84_0.604384531954393_6.7115832021149_2.38109619744203-4 chr8 77487911 77488406 + 2.38109619744203 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -28898 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA unique_peak2_35_153_0.464511132364122_7.49904210687696_2.38107431839172 chr7 140946104 140947102 + 2.38107431839172 NA exon (NM_145387, exon 13 of 14) exon (NM_145387, exon 13 of 14) 3636 NM_053088 73835 Mm.389989 NM_053088 ENSMUSG00000025489 Ifitm5 1110003J06Rik|AW213665|Bril|DSPA1|Hrmp1|Hrtm1 interferon induced transmembrane protein 5 protein-coding common_peak1_107_948_-0.214832087808803_9.78284823311671_2.38093367730666 chr9 123518142 123519835 + 2.38093367730666 NA intron (NM_013860, intron 7 of 7) MER33|DNA|hAT-Charlie -10894 NM_030692 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding common_peak2_63_344_0.319025333832348_8.58996521858171_2.38028321485499 chr17 71310200 71311874 + 2.38028321485499 NA promoter-TSS (NM_145158) promoter-TSS (NM_145158) -72 NM_145158 246707 Mm.23462 NM_145158 ENSMUSG00000024053 Emilin2 FOAP-10 elastin microfibril interfacer 2 protein-coding common_peak1_63_344_0.319025333832348_8.58996521858171_2.38028321485499 chr11 60209757 60210582 + 2.38028321485499 NA intron (NM_011480, intron 1 of 18) intron (NM_011480, intron 1 of 18) -7842 NR_105887 102465556 NR_105887 ENSMUSG00000099259 Mir6922 Gm27269|mmu-mir-6922 microRNA 6922 ncRNA common_peak2_46_375_-0.35145776425162_8.37885996955183_2.38022939243036 chr10 118434940 118436516 + 2.38022939243036 NA Intergenic Intergenic -5318 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak2_21_168_-0.541081693588233_7.13033858948807_2.38022627114337 chr6 86592483 86593263 + 2.38022627114337 NA Intergenic B1_Mus1|SINE|Alu -35301 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak1_21_168_-0.541081693588233_7.13033858948807_2.38022627114337 chr15 102624707 102625110 + 2.38022627114337 NA intron (NM_001310067, intron 1 of 11) intron (NM_001310067, intron 1 of 11) 556 NM_001310070 223922 Mm.208714 NM_146065 ENSMUSG00000052414 Atf7 1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik activating transcription factor 7 protein-coding common_peak1_21_168_-0.541081693588233_7.13033858948807_2.38022627114337-2 chr7 78721860 78722375 + 2.38022627114337 NA Intergenic Intergenic -3897 NR_015542 414121 Mm.482537 NR_015542 ENSMUSG00000059146 E430016F16Rik - RIKEN cDNA E430016F16 gene ncRNA common_peak1_60_499_-0.301264833615114_8.81515186785453_2.37995378927041 chr1 84406973 84407747 + 2.37995378927041 NA intron (NM_152915, intron 9 of 12) intron (NM_152915, intron 9 of 12) -122715 NM_001003948 98496 Mm.187470 NM_001003948 ENSMUSG00000045658 Pid1 5033414K04Rik|NYGGF4 phosphotyrosine interaction domain containing 1 protein-coding common_peak1_92_800_-0.234841711521121_9.52823757664815_2.37958471027197 chr6 51523816 51525491 + 2.37958471027197 NA intron (NM_001127349, intron 1 of 6) intron (NM_001127349, intron 1 of 6) 750 NM_001127349 71982 Mm.294166 NM_028035 ENSMUSG00000038301 Snx10 2410004M09Rik sorting nexin 10 protein-coding common_peak1_123_1110_-0.197736274282073_10.0187749642481_2.37915407633739 chr4 129600161 129601384 + 2.37915407633739 NA promoter-TSS (NM_018799) promoter-TSS (NM_018799) 65 NM_029748 76799 Mm.293096 NM_029748 ENSMUSG00000028797 Tmem234 1500002D11Rik|2510006D16Rik|4933407D05Rik transmembrane protein 234 protein-coding common_peak2_85_514_0.263910859369725_9.14038405175544_2.3787506590005 chr12 85218777 85220354 + 2.3787506590005 NA promoter-TSS (NM_145445) promoter-TSS (NM_145445) 84 NM_145445 217715 Mm.29041 NM_145445 ENSMUSG00000004788 Eif2b2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B, subunit 2 beta protein-coding common_peak1_73_618_-0.267399636816497_9.14009578080601_2.3787506590005 chr19 18712541 18713780 + 2.3787506590005 NA promoter-TSS (NM_177640) promoter-TSS (NM_177640) -76 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding common_peak1_246_2053_0.135148652153529_11.071794792395_2.37848036511021 chr11 61853732 61855716 + 2.37848036511021 NA 5' UTR (NM_013881, exon 1 of 27) 5' UTR (NM_013881, exon 1 of 27) 368 NM_013881 29869 Mm.162025 NM_013881 ENSMUSG00000004798 Ulk2 A830085I22Rik|AU015340|Unc51.2|mKIAA0623 unc-51 like kinase 2 protein-coding common_peak2_165_1227_0.174023334984525_10.3491065128624_2.37766645653342 chr7 116332949 116334932 + 2.37766645653342 NA exon (NM_026533, exon 2 of 6) exon (NM_026533, exon 2 of 6) 250 NM_026533 68052 Mm.14798 NM_026533 ENSMUSG00000090862 Rps13 2700063M04Rik ribosomal protein S13 protein-coding common_peak1_108_706_0.226175830720237_9.57865432016952_2.37706529931882 chr19 5911972 5912867 + 2.37706529931882 NA intron (NM_001291078, intron 1 of 11) CpG 452 NM_011262 19708 Mm.2651 NM_011262 ENSMUSG00000024826 Dpf2 2210010M07Rik|BAF45D|Req|ubi-d4 D4, zinc and double PHD fingers family 2 protein-coding common_peak1_170_1276_0.170090426000735_10.4035880227031_2.37695408116094 chr1 173450529 173452749 + 2.37695408116094 NA intron (NM_001013779, intron 2 of 8) intron (NM_001013779, intron 2 of 8) 31035 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_78_665_-0.257279275957945_9.25073872909229_2.37640891759352 chr4 106839094 106840182 + 2.37640891759352 NA Intergenic CpG -39807 NM_025590 329910 Mm.222956 NM_025590 ENSMUSG00000034853 Acot11 1110020M10Rik|2010309H15Rik|AW060409|BFIT|BFIT1|Thea|Them1|mKIAA0707 acyl-CoA thioesterase 11 protein-coding common_peak2_52_265_0.360459329941923_8.23551210047215_2.37619695296309 chr19 16772915 16774251 + 2.37619695296309 NA intron (NM_173028, intron 1 of 71) intron (NM_173028, intron 1 of 71) 7350 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding unique_peak1_17_54_0.723325648348007_6.14302253769866_2.37404877452972 chr9 123577517 123577978 + 2.37404877452972 NA intron (NM_030692, intron 12 of 19) intron (NM_030692, intron 12 of 19) 47865 NM_030692 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding common_peak1_17_54_0.723325648348007_6.14302253769866_2.37404877452972-2 chr8 120802170 120802539 + 2.37404877452972 NA Intergenic Intergenic 63715 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_17_54_0.723325648348007_6.14302253769866_2.37404877452972 chr1 39369101 39369497 + 2.37404877452972 NA intron (NM_001252218, intron 1 of 3) intron (NM_001252218, intron 1 of 3) 1448 NM_001252218 114641 Mm.379302 NM_053257 ENSMUSG00000073702 Rpl31 Dts ribosomal protein L31 protein-coding common_peak2_66_553_-0.283198465899465_8.97214293309946_2.37323234905865 chrX 75054784 75058007 + 2.37323234905865 NA intron (NM_181584, intron 1 of 9) intron (NM_181584, intron 1 of 9) 28510 NM_181584 210710 Mm.267056 NM_181584 ENSMUSG00000032750 Gab3 5930433H21Rik growth factor receptor bound protein 2-associated protein 3 protein-coding common_peak2_93_580_0.247349045207846_9.30606887600845_2.37250775006461 chr11 87732804 87735083 + 2.37250775006461 NA intron (NM_172448, intron 9 of 9) intron (NM_172448, intron 9 of 9) -3622 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding common_peak1_578_6069_0.079459007456494_12.6072103048713_2.37178555966826 chr9 35121860 35126398 + 2.37178555966826 NA TTS (NM_027030) TTS (NM_027030) -7319 NM_009178 20443 Mm.275973 NM_009178 ENSMUSG00000032038 St3gal4 Siat4c ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding common_peak1_95_829_-0.229967435769479_9.58198380834955_2.37165125462838 chr11 78164789 78166275 + 2.37165125462838 NA promoter-TSS (NM_009423) promoter-TSS (NM_009423) 18 NM_009423 22032 Mm.390418 NM_009423 ENSMUSG00000017386 Traf4 A530032M13Rik|CART1|msp2 TNF receptor associated factor 4 protein-coding common_peak2_91_790_-0.235848458006569_9.50960965546951_2.3713784948912 chr9 108049074 108050747 + 2.3713784948912 NA intron (NM_177910, intron 2 of 8) intron (NM_177910, intron 2 of 8) 620 NM_177910 331026 Mm.22554 NM_177910 ENSMUSG00000070284 Gmppb AI317178|E430010H19 GDP-mannose pyrophosphorylase B protein-coding common_peak1_131_1192_-0.189833757661637_10.1254614488644_2.37073480673771 chr18 67732500 67734499 + 2.37073480673771 NA Intergenic Intergenic -8878 NM_008977 19255 Mm.260433 NM_008977 ENSMUSG00000024539 Ptpn2 AI325124|Ptpt|TC-PTP protein tyrosine phosphatase, non-receptor type 2 protein-coding common_peak1_153_1424_-0.173412351980044_10.3900400279494_2.3703219147988 chr11 61266337 61267982 + 2.3703219147988 NA promoter-TSS (NM_007437) promoter-TSS (NM_007437) 27 NM_007437 11671 Mm.398221 NM_007437 ENSMUSG00000010025 Aldh3a2 AI194803|Ahd-3|Ahd-3r|Ahd3|Ahd3-r|Aldh4|Aldh4-r|FALDH aldehyde dehydrogenase family 3, subfamily A2 protein-coding common_peak2_109_967_-0.210959907702323_9.81338328342343_2.36966527461113 chr11 121672407 121674261 + 2.36966527461113 NA promoter-TSS (NM_178664) promoter-TSS (NM_178664) -183 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak2_58_481_-0.307362931188136_8.75920787063589_2.36932168346496 chr3 131563962 131565457 + 2.36932168346496 NA promoter-TSS (NM_011863) promoter-TSS (NM_011863) -59 NM_001289479 23971 Mm.244912 NM_011863 ENSMUSG00000028032 Papss1 AI325286|Asapk|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding common_peak2_57_471_-0.307367423662916_8.72895933753038_2.36931455026854 chr2 32774970 32776332 + 2.36931455026854 NA promoter-TSS (NM_177384) promoter-TSS (NM_177384) -18 NM_001290563 338348 Mm.475130 NM_177384 ENSMUSG00000039021 Ttc16 1200002K10Rik tetratricopeptide repeat domain 16 protein-coding common_peak1_163_1531_-0.166532694486818_10.4979342346815_2.36836093417284 chr11 54522876 54523813 + 2.36836093417284 NA intron (NM_001252494, intron 1 of 28) intron (NM_001252494, intron 1 of 28) 499 NM_001252496 192786 Mm.254404 NM_175258 ENSMUSG00000037533 Rapgef6 A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052 Rap guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak1_100_638_0.237176072658462_9.43826015727623_2.36792624855439 chr13 85189202 85190671 + 2.36792624855439 NA intron (NM_023243, intron 1 of 8) intron (NM_023243, intron 1 of 8) 459 NM_023243 66671 Mm.18474 NM_023243 ENSMUSG00000021548 Ccnh 6330408H09Rik|AI661354|AV102684|AW538719 cyclin H protein-coding common_peak2_31_248_-0.437136357756557_7.7414337531898_2.36750577711819 chr5 23887168 23888074 + 2.36750577711819 NA intron (NR_037304, intron 2 of 4) intron (NR_037304, intron 2 of 4) 35388 NR_028536 100217436 NR_028536 Snord93 Gm22397|MBII-336 small nucleolar RNA, C/D box 93 snoRNA common_peak1_31_248_-0.437136357756557_7.7414337531898_2.36750577711819-2 chr13 101705402 101706011 + 2.36750577711819 NA intron (NM_001077495, intron 4 of 15) intron (NM_001077495, intron 4 of 15) -13076 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_31_248_-0.437136357756557_7.7414337531898_2.36750577711819 chr10 39959695 39960306 + 2.36750577711819 NA 5' UTR (NM_001173500, exon 1 of 4) 5' UTR (NM_001173500, exon 1 of 4) 153 NM_001173500 100041085 Mm.332530 NM_001173500 ENSMUSG00000071335 Mfsd4b3 G630090E17Rik|Naglt1c major facilitator superfamily domain containing 4B3 protein-coding unique_peak2_25_200_-0.495630446537996_7.40323646790993_2.36748782403931-2 chr9 74964685 74965719 + 2.36748782403931 NA intron (NM_001113283, intron 2 of 12) intron (NM_001113283, intron 2 of 12) -10909 NM_153584 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding unique_peak2_25_200_-0.495630446537996_7.40323646790993_2.36748782403931 chr13 55329294 55330479 + 2.36748782403931 NA promoter-TSS (NM_016662) promoter-TSS (NM_016662) -156 NM_016662 17121 Mm.20350 NM_016662 ENSMUSG00000021485 Mxd3 4631412E13Rik|Mad3|bHLHc13 Max dimerization protein 3 protein-coding common_peak1_25_200_-0.495630446537996_7.40323646790993_2.36748782403931 chr11 120630079 120630692 + 2.36748782403931 NA intron (NM_010756, intron 1 of 2) intron (NM_010756, intron 1 of 2) 3162 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding common_peak1_28_112_0.52848435209738_7.08442113846388_2.36678605684196-3 chr7 46839104 46839707 + 2.36678605684196 NA Intergenic Intergenic -6399 NM_010699 16828 Mm.29324 NM_010699 ENSMUSG00000063229 Ldha Ldh1|Ldhm|l7R2 lactate dehydrogenase A protein-coding common_peak1_28_112_0.52848435209738_7.08442113846388_2.36678605684196 chr19 5741753 5742291 + 2.36678605684196 NA 5' UTR (NM_008520, exon 2 of 28) 5' UTR (NM_008520, exon 2 of 28) 1118 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding common_peak2_28_112_0.52848435209738_7.08442113846388_2.36678605684196 chr9 45221716 45222441 + 2.36678605684196 NA intron (NM_001198971, intron 1 of 4) intron (NM_001198971, intron 1 of 4) -18003 NM_145403 214523 Mm.436756 NM_145403 ENSMUSG00000032091 Tmprss4 mCAP2 transmembrane protease, serine 4 protein-coding common_peak1_28_112_0.52848435209738_7.08442113846388_2.36678605684196-2 chr2 140170761 140171223 + 2.36678605684196 NA promoter-TSS (NM_001081090) promoter-TSS (NM_001081090) 346 NM_027093 69487 Mm.287921 NM_027093 ENSMUSG00000027384 Ndufaf5 2310003L22Rik NADH dehydrogenase (ubiquinone) complex I, assembly factor 5 protein-coding common_peak2_120_811_0.211230927450272_9.77095138091031_2.36660576014519 chr14 105922234 105924126 + 2.36660576014519 NA Intergenic Intergenic -26361 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty homolog 2 (Drosophila) protein-coding common_peak1_465_4613_0.0909215833772219_12.2172630803716_2.36642640227382 chr5 32134972 32138079 + 2.36642640227382 NA promoter-TSS (NM_008037) promoter-TSS (NM_008037) 53 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_51_259_0.359665742798834_8.20220068442787_2.36634307150384 chr15 38384254 38385437 + 2.36634307150384 NA Intergenic Intergenic -84134 NM_001289471 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding common_peak2_139_1275_-0.182742276868623_10.2260414753306_2.36624412638469 chr11 87421809 87424164 + 2.36624412638469 NA intron (NM_031386, intron 1 of 30) U1|snRNA|snRNA -4605 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_65_544_-0.286180160817052_8.94702233925576_2.36602837954689 chr8 70139388 70140214 + 2.36602837954689 NA promoter-TSS (NM_011266) promoter-TSS (NM_011266) 302 NR_132133 72368 Mm.644 NM_001145552 ENSMUSG00000002345 Borcs8 2310045N01Rik|Mef2bnb BLOC-1 related complex subunit 8 protein-coding common_peak2_65_544_-0.286180160817052_8.94702233925576_2.36602837954689 chr1 192136592 192138753 + 2.36602837954689 NA intron (NM_001290278, intron 1 of 10) CpG-848 368 NM_001290278 214742 Mm.207457 NM_144814 ENSMUSG00000037395 Rcor3 4921514E24Rik|C730034D20Rik|E130101E15Rik REST corepressor 3 protein-coding common_peak2_65_544_-0.286180160817052_8.94702233925576_2.36602837954689-2 chr11 101732824 101733812 + 2.36602837954689 NA intron (NM_144831, intron 1 of 22) intron (NM_144831, intron 1 of 22) 362 NM_144831 217207 Mm.28186 NM_144831 ENSMUSG00000034931 Dhx8 Ddx8|mDEAH6|mKIAA4096 DEAH (Asp-Glu-Ala-His) box polypeptide 8 protein-coding common_peak1_319_2861_0.114775515649532_11.5401957145514_2.36535204757644 chr11 20631340 20633566 + 2.36535204757644 NA intron (NM_001038625, intron 1 of 1) CpG 476 NM_001038625 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding common_peak1_71_599_-0.270908706250502_9.09336433737063_2.36532970845858 chr10 8213356 8214186 + 2.36532970845858 NA intron (NM_177387, intron 7 of 7) intron (NM_177387, intron 7 of 7) -257648 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_123_838_0.207379826667195_9.81621691377342_2.36507805723714 chr13 30659404 30660800 + 2.36507805723714 NA promoter-TSS (NM_134068) promoter-TSS (NM_134068) 43 NM_134068 105352 Mm.289646 NM_134068 ENSMUSG00000069255 Dusp22 JKAP|JSP1|LMW-DSP2|MKPX dual specificity phosphatase 22 protein-coding common_peak2_229_2270_-0.135933288548705_11.0811453464325_2.3650583481596 chr17 6741210 6749338 + 2.3650583481596 NA intron (NM_009510, intron 7 of 12) intron (NM_009510, intron 7 of 12) 37506 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_38_172_0.438315221971136_7.65378583862229_2.36504210497139 chr15 76229034 76230025 + 2.36504210497139 NA promoter-TSS (NM_201385) promoter-TSS (NM_201385) -32 NM_201385 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_56_462_-0.310369663710063_8.6996835514052_2.3648563178511 chr5 105061748 105063316 + 2.3648563178511 NA Intergenic Intergenic -8971 NM_029509 76074 Mm.458519 NM_029509 ENSMUSG00000034438 Gbp8 5830443L24Rik|mGBP8 guanylate-binding protein 8 protein-coding common_peak1_61_330_0.322607109113445_8.53199096136394_2.36482410728713 chr12 79295475 79296565 + 2.36482410728713 NA intron (NM_001008550, intron 1 of 41) intron (NM_001008550, intron 1 of 41) 262 NM_001008550 211978 Mm.297919 NM_001008550 ENSMUSG00000066440 Zfyve26 4930465A13|9330197E15Rik|A630028O16Rik|Gm893|mKIAA0321 zinc finger, FYVE domain containing 26 protein-coding common_peak2_105_927_-0.215626918498105_9.75016753587852_2.36418681503998 chr13 81710312 81712381 + 2.36418681503998 NA promoter-TSS (NM_001081176) promoter-TSS (NM_001081176) -71 NM_028372 72852 Mm.31095 NM_028372 ENSMUSG00000051098 Mblac2 2900024O10Rik metallo-beta-lactamase domain containing 2 protein-coding common_peak2_50_252_0.364677202433146_8.16533217591088_2.36395078147652 chr6 114901077 114902665 + 2.36395078147652 NA intron (NM_177683, intron 1 of 4) (TTTTC)n|Simple_repeat|Simple_repeat 19881 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_50_252_0.364677202433146_8.16533217591088_2.36395078147652 chr10 62500669 62501537 + 2.36395078147652 NA intron (NM_011157, intron 1 of 2) intron (NM_011157, intron 1 of 2) 6652 NM_011157 19073 Mm.338790 NM_011157 ENSMUSG00000020077 Srgn Prg|Prg1|Sgc serglycin protein-coding common_peak2_96_605_0.242164379890458_9.36425617341818_2.3639368342043-2 chr15 76205890 76208384 + 2.3639368342043 NA promoter-TSS (NM_001163540) promoter-TSS (NM_001163540) -816 NM_001163540 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_96_605_0.242164379890458_9.36425617341818_2.3639368342043 chr13 13589491 13591380 + 2.3639368342043 NA promoter-TSS (NM_010748) promoter-TSS (NM_010748) 26 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding common_peak2_96_605_0.242164379890458_9.36425617341818_2.3639368342043-3 chr7 101634050 101636897 + 2.3639368342043 NA Intergenic Intergenic -28295 NM_009191 20480 Mm.3990 NM_009191 ENSMUSG00000001829 Clpb AL118244|Skd3 ClpB caseinolytic peptidase B protein-coding common_peak1_217_1748_0.146039972794339_10.8453345603188_2.36366585082815 chr18 79108104 79110411 + 2.36366585082815 NA 5' UTR (NM_053099, exon 1 of 6) 5' UTR (NM_053099, exon 1 of 6) 134 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak2_90_780_-0.236833695421932_9.49076189043101_2.36325740181582 chr10 128082416 128084293 + 2.36325740181582 NA promoter-TSS (NM_016774) promoter-TSS (NM_016774) 47 NM_016774 11947 Mm.238973 NM_016774 ENSMUSG00000025393 Atp5b - ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit protein-coding common_peak1_235_2339_-0.133541787056227_11.1255219209427_2.36232739417341 chr11 118408219 118410783 + 2.36232739417341 NA intron (NM_029502, intron 3 of 4) intron (NM_029502, intron 3 of 4) 6299 NM_001267591 76025 Mm.177551 NM_029502 ENSMUSG00000025575 Cant1 5830420C20Rik|Apy1h|D11Bwg0554e|Entpd8|SCAN-1|Shapy calcium activated nucleotidase 1 protein-coding common_peak2_49_245_0.370112997983501_8.12757100433099_2.36220607753755 chr9 50905051 50906699 + 2.36220607753755 NA intron (NM_178710, intron 9 of 15) intron (NM_178710, intron 9 of 15) 48951 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding unique_peak2_26_207_-0.478232151301497_7.46132364249034_2.36212467670853-2 chrX 75744217 75745836 + 2.36212467670853 NA intron (NR_029443, intron 5 of 8) intron (NR_029443, intron 5 of 8) 19673 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA unique_peak2_26_207_-0.478232151301497_7.46132364249034_2.36212467670853 chr4 133412260 133413615 + 2.36212467670853 NA intron (NM_016981, intron 2 of 11) B1_Mus1|SINE|Alu 43161 NR_039582 100628620 NR_039582 ENSMUSG00000092745 Mir5122 mmu-mir-5122|mu-mir-5122 microRNA 5122 ncRNA common_peak1_118_1058_-0.201414503752693_9.94777962211599_2.3621205172416 chr5 76904720 76906337 + 2.3621205172416 NA promoter-TSS (NM_173765) promoter-TSS (NM_173765) -14 NM_173765 231326 Mm.39271 NM_173765 ENSMUSG00000055923 Aasdh A230062G08Rik|A830035E16|Acsf4|U26 aminoadipate-semialdehyde dehydrogenase protein-coding common_peak1_140_992_0.191615696050929_10.0514577555538_2.36209226359116 chr2 118478880 118480406 + 2.36209226359116 NA promoter-TSS (NM_009273) promoter-TSS (NM_009273) 53 NM_009273 20813 Mm.363404 NM_009273 ENSMUSG00000009549 Srp14 14kDa|AW536328 signal recognition particle 14 protein-coding common_peak1_183_1404_0.161943322544291_10.5373260763804_2.36152161532471 chr15 80024396 80026649 + 2.36152161532471 NA Intergenic Intergenic -10714 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak2_16_130_-0.629886740563278_6.71847963125581_2.3614546671685 chr13 23423975 23424615 + 2.3614546671685 NA promoter-TSS (NM_013924) promoter-TSS (NM_013924) -429 NM_013924 30946 Mm.292094 NM_013924 ENSMUSG00000036376 Abt1 - activator of basal transcription 1 protein-coding common_peak1_16_130_-0.629886740563278_6.71847963125581_2.3614546671685-3 chr6 129917285 129917740 + 2.3614546671685 NA Intergenic Intergenic -4288 NM_008463 16636 Mm.14111 NM_008463 ENSMUSG00000030173 Klra5 Ly49e killer cell lectin-like receptor, subfamily A, member 5 protein-coding unique_peak2_16_130_-0.629886740563278_6.71847963125581_2.3614546671685 chr7 64060427 64061419 + 2.3614546671685 NA Intergenic Zaphod|DNA|hAT-Tip100 -92912 NM_001039104 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak1_16_130_-0.629886740563278_6.71847963125581_2.3614546671685 chr10 120209746 120210219 + 2.3614546671685 NA intron (NM_026617, intron 1 of 6) intron (NM_026617, intron 1 of 6) 1156 NM_026617 68212 Mm.157426 NM_026617 ENSMUSG00000020225 Tmbim4 0610007H07Rik|AU022431 transmembrane BAX inhibitor motif containing 4 protein-coding common_peak1_16_130_-0.629886740563278_6.71847963125581_2.3614546671685-2 chr11 50107939 50108384 + 2.3614546671685 NA intron (NM_001290750, intron 7 of 7) intron (NM_001290750, intron 7 of 7) -23199 NM_001290759 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding unique_peak2_47_231_0.38240678415088_8.04918438720301_2.36087940154782 chr11 60175411 60177405 + 2.36087940154782 NA intron (NM_001037764, intron 1 of 4) CpG 24209 NR_105886 102465555 NR_105886 ENSMUSG00000098547 Mir6921 Gm27352|mmu-mir-6921 microRNA 6921 ncRNA common_peak1_47_231_0.38240678415088_8.04918438720301_2.36087940154782 chr8 120696795 120697693 + 2.36087940154782 NA Intergenic Intergenic 28924 NM_001293559 12857 Mm.386758 NM_009941 ENSMUSG00000031818 Cox4i1 AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1 cytochrome c oxidase subunit IV isoform 1 protein-coding common_peak2_55_453_-0.313371426086633_8.6698627742476_2.36074508408457 chr11 74648658 74650235 + 2.36074508408457 NA promoter-TSS (NM_001081158) promoter-TSS (NM_001081158) -49 NM_001081158 74148 Mm.214574 NM_001081158 ENSMUSG00000020741 Cluh 1300001I01Rik|Kiaa0664|mKIAA0664 clustered mitochondria (cluA/CLU1) homolog protein-coding common_peak2_184_1760_-0.154289955741477_10.7050342159605_2.36067983859571 chr19 29804771 29807256 + 2.36067983859571 NA promoter-TSS (NM_172836) promoter-TSS (NM_172836) -4 NM_172836 240613 Mm.313351 NM_172836 ENSMUSG00000046138 9930021J03Rik ENSMUSG00000048936|Gm9832|mKIAA2026 RIKEN cDNA 9930021J03 gene protein-coding common_peak2_144_1328_-0.179356487885284_10.2864471453335_2.36063055943524 chr10 79852354 79854374 + 2.36063055943524 NA non-coding (NR_029447, exon 1 of 1) non-coding (NR_029447, exon 1 of 1) -1068 NM_001077363 19205 Mm.265610 NM_008956 ENSMUSG00000006498 Ptbp1 AA407203|AL033359|HNRPI|PTB-1|PTB2|PTB3|PTB4|Ptb|pPTB polypyrimidine tract binding protein 1 protein-coding common_peak2_415_3995_0.0975296215939387_12.0131056785894_2.35998981844389 chr10 118866838 118870918 + 2.35998981844389 NA promoter-TSS (NM_001014390) promoter-TSS (NM_001014390) 25 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak2_221_1790_0.14398085656509_10.8785400502685_2.35992379411537 chr1 138321847 138324671 + 2.35992379411537 NA Intergenic Intergenic 49521 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_85_731_-0.243360356843738_9.39401965986217_2.35885420005937 chr1 72710470 72712356 + 2.35885420005937 NA intron (NM_009084, intron 1 of 3) CpG 153 NM_009084 19981 Mm.21529 NM_009084 ENSMUSG00000046330 Rpl37a - ribosomal protein L37a protein-coding unique_peak1_13_36_0.85049907320262_5.63470290223026_2.35878721299899-2 chr9 70691792 70692180 + 2.35878721299899 NA intron (NM_007399, intron 1 of 15) intron (NM_007399, intron 1 of 15) 12985 NM_007399 11487 Mm.3037 NM_007399 ENSMUSG00000054693 Adam10 1700031C13Rik|MADM|kuz|kuzbanian a disintegrin and metallopeptidase domain 10 protein-coding unique_peak1_13_36_0.85049907320262_5.63470290223026_2.35878721299899 chr2 126479621 126480009 + 2.35878721299899 NA intron (NM_001080944, intron 3 of 27) intron (NM_001080944, intron 3 of 27) 11738 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak1_137_965_0.193328252597377_10.0125435051345_2.3586805143928 chr11 86543940 86545617 + 2.3586805143928 NA promoter-TSS (NM_001199047) promoter-TSS (NM_001199047) 29 NM_028259 72508 Mm.394280 NM_028259 ENSMUSG00000020516 Rps6kb1 2610318I15Rik|4732464A07Rik|70kDa|AA959758|AI256796|AI314060|S6K1|p70/85s6k|p70s6k ribosomal protein S6 kinase, polypeptide 1 protein-coding common_peak1_178_1355_0.164403122286425_10.4873430242796_2.35845026704723 chr4 140960508 140962329 + 2.35845026704723 NA exon (NM_023374, exon 1 of 8) exon (NM_023374, exon 1 of 8) 147 NM_023374 67680 Mm.246965 NM_023374 ENSMUSG00000009863 Sdhb 0710008N11Rik succinate dehydrogenase complex, subunit B, iron sulfur (Ip) protein-coding common_peak1_19_152_-0.566253615061876_6.97426103516171_2.35839239155885 chr2 165530658 165531093 + 2.35839239155885 NA Intergenic L2a|LINE|L2 26978 NM_130451 170441 Mm.34147 NM_130451 ENSMUSG00000027661 Slc2a10 AA450473|Glut10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding common_peak2_401_3826_0.0992923418208651_11.9516443565789_2.35828396061677 chr17 32281105 32285397 + 2.35828396061677 NA intron (NM_020508, intron 1 of 19) intron (NM_020508, intron 1 of 19) 872 NM_198094 57261 Mm.253518 NM_020508 ENSMUSG00000024002 Brd4 Brd5|HUNK1|MCAP|WI-11513 bromodomain containing 4 protein-coding common_peak2_322_2896_0.113752476720915_11.5572202076309_2.35822052724928 chr9 116364970 116370235 + 2.35822052724928 NA Intergenic RMER13A|LTR|ERVK -192239 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak2_134_937_0.19686904120254_9.97187863311665_2.35798851955211 chr2 130178123 130180198 + 2.35798851955211 NA intron (NM_009225, intron 1 of 6) CpG 204 NM_009225 20638 Mm.88216 NM_009225 ENSMUSG00000027404 Snrpb AL024368|AU018828|SM-B|SM11|SMB|SNRNP-B small nuclear ribonucleoprotein B protein-coding common_peak1_40_185_0.422284453957395_7.75030103808673_2.35791268679802 chr6 86396518 86397253 + 2.35791268679802 NA intron (NM_025823, intron 1 of 5) CpG 265 NM_025823 66881 Mm.30849 NM_025823 ENSMUSG00000029998 Pcyox1 1200015P13Rik|AI115532|AI448340|PCL1|Pcly prenylcysteine oxidase 1 protein-coding common_peak1_54_444_-0.316370507467845_8.63947627211984_2.35700302198246 chr11 62667862 62668694 + 2.35700302198246 NA Intergenic Intergenic 19614 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding common_peak1_70_590_-0.273854774330514_9.07008693301227_2.35697548455416 chr3 131112359 131113515 + 2.35697548455416 NA intron (NM_001276403, intron 1 of 11) intron (NM_001276403, intron 1 of 11) 146 NM_001276403 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_317_3321_-0.111347765179625_11.6421624753726_2.35608381282869 chr19 36832830 36835735 + 2.35608381282869 NA promoter-TSS (NM_001163635) promoter-TSS (NM_001163635) 50 NM_001163635 74493 Mm.249310 NM_001163635 ENSMUSG00000024811 Tnks2 5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 protein-coding common_peak1_39_179_0.425893442487458_7.7047998175734_2.355906936049 chr2 170128603 170129407 + 2.355906936049 NA intron (NM_001159683, intron 2 of 6) intron (NM_001159683, intron 2 of 6) 2215 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_14_115_-0.675936873716224_6.52001255826946_2.35581394837923 chr5 123344430 123344842 + 2.35581394837923 NA exon (NM_029850, exon 1 of 6) exon (NM_029850, exon 1 of 6) 188 NM_029850 77045 Mm.151960 NM_029850 ENSMUSG00000029438 Bcl7a 4432415N06Rik|AI448316 B cell CLL/lymphoma 7A protein-coding unique_peak2_14_115_-0.675936873716224_6.52001255826946_2.35581394837923 chr4 11724405 11725453 + 2.35581394837923 NA Intergenic L1M3|LINE|L1 20482 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding common_peak1_33_264_-0.419699977290035_7.83999856080554_2.35543965091189-2 chr8 116992851 116993501 + 2.35543965091189 NA intron (NM_026572, intron 1 of 4) CpG 273 NM_026572 68133 Mm.258462 NM_026572 ENSMUSG00000034424 Gcsh 1100001L02Rik|5730591C18Rik glycine cleavage system protein H (aminomethyl carrier) protein-coding common_peak1_33_264_-0.419699977290035_7.83999856080554_2.35543965091189 chr7 127386707 127387195 + 2.35543965091189 NA exon (NM_030226, exon 1 of 3) exon (NM_030226, exon 1 of 3) 215 NM_030226 78921 Mm.200950 NM_030226 ENSMUSG00000030823 9130019O22Rik - RIKEN cDNA 9130019O22 gene protein-coding common_peak2_42_198_0.409102549710302_7.8411758953988_2.35543965091189 chr12 111814097 111814784 + 2.35543965091189 NA promoter-TSS (NM_028875) promoter-TSS (NM_028875) 270 NM_026752 68520 Mm.390497 NM_026752 ENSMUSG00000021286 Zfyve21 1110013H04Rik|AW558780|C85416 zinc finger, FYVE domain containing 21 protein-coding common_peak2_75_636_-0.261560736486697_9.18436919401295_2.35526217723422 chr14 55723639 55725690 + 2.35526217723422 NA Intergenic Intergenic -2488 NM_019519 56187 Mm.87216 NM_019519 ENSMUSG00000040472 Rabggta gm Rab geranylgeranyl transferase, a subunit protein-coding common_peak1_75_636_-0.261560736486697_9.18436919401295_2.35526217723422 chr13 70637242 70638386 + 2.35526217723422 NA promoter-TSS (NM_144837) promoter-TSS (NM_144837) -180 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak1_169_1595_-0.161990777183497_10.5592495476306_2.35504562372275 chr17 35261758 35263019 + 2.35504562372275 NA promoter-TSS (NM_010380) promoter-TSS (NM_010380) -706 NM_010380 14964 Mm.439675 NM_010380 ENSMUSG00000073411 H2-D1 H-2D|H2-D histocompatibility 2, D region locus 1 protein-coding common_peak1_67_375_0.302172031669246_8.70567486751226_2.35497959782405 chr7 43428294 43429339 + 2.35497959782405 NA Intergenic Intergenic -1285 NM_177693 233187 Mm.267027 NM_177693 ENSMUSG00000004613 Lim2 19kDa|4833403J20|MP19|To3 lens intrinsic membrane protein 2 protein-coding common_peak1_104_917_-0.216770112736988_9.73396528704531_2.35469498008757 chr11 77077548 77079136 + 2.35469498008757 NA promoter-TSS (NR_030756) promoter-TSS (NR_030756) 95 NM_001012309 237859 Mm.156195 NM_001012309 ENSMUSG00000037958 Nsrp1 8030451K07|AI851076|AL022898|Ccdc55|NSpr70|NSrp70 nuclear speckle regulatory protein 1 protein-coding common_peak1_45_218_0.390286055678692_7.96993008744052_2.35465182451005 chr8 33601593 33602525 + 2.35465182451005 NA intron (NM_017374, intron 1 of 6) intron (NM_017374, intron 1 of 6) 2438 NM_017374 19053 Mm.29301 NM_017374 ENSMUSG00000009630 Ppp2cb AI115466|D8Ertd766e|PP2Ac protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform protein-coding common_peak2_214_1718_0.14647892765421_10.8205932933052_2.35435805553451 chr4 133704777 133708538 + 2.35435805553451 NA intron (NM_001080819, intron 4 of 19) intron (NM_001080819, intron 4 of 19) 10451 NR_106086 102465707 NR_106086 ENSMUSG00000104566 Mir7227 mmu-mir-7227 microRNA 7227 ncRNA common_peak2_215_2109_-0.140982783195884_10.9725358919966_2.35428879399296 chr17 27819187 27821968 + 2.35428879399296 NA promoter-TSS (NM_001271511) promoter-TSS (NM_001271511) -35 NM_001271511 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak2_95_597_0.242998416266703_9.34550088233146_2.35367873078825 chr1 86153865 86155295 + 2.35367873078825 NA promoter-TSS (NM_027456) promoter-TSS (NM_027456) -200 NM_030184 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding common_peak1_53_435_-0.319364446750976_8.60850210140144_2.35365423564653 chr8 128643082 128644031 + 2.35365423564653 NA Intergenic Intergenic -42098 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_46_225_0.38295212501083_8.0116550249206_2.35345033945325 chr11 70897342 70898663 + 2.35345033945325 NA intron (NM_001291141, intron 4 of 16) intron (NM_001291141, intron 4 of 16) 53241 NM_001291142 54189 Mm.7087 NM_019400 ENSMUSG00000020817 Rabep1 Rab5ep|rabaptin-5|rabaptin-5alpha rabaptin, RAB GTPase binding effector protein 1 protein-coding unique_peak2_8_71_-0.891851950756_5.72399902606431_2.35199658438495 chr15 43282848 43283386 + 2.35199658438495 NA promoter-TSS (NM_008388) promoter-TSS (NM_008388) -381 NM_008388 16341 Mm.289992 NM_008388 ENSMUSG00000022336 Eif3e 48kDa|Eif3s6|Int6|eIF3-p46|eIF3-p48 eukaryotic translation initiation factor 3, subunit E protein-coding common_peak1_22_176_-0.529144745989488_7.20303317708825_2.35187163252606 chr15 36174045 36174526 + 2.35187163252606 NA intron (NM_001039368, intron 1 of 3) PB1D7|SINE|Alu 275 NM_001039368 17749 Mm.27375 NM_023127 ENSMUSG00000045996 Polr2k ABC10-alpha|MafY|Mt1a|RPABC4|RPB10alpha|RPB12|RPB7.0 polymerase (RNA) II (DNA directed) polypeptide K protein-coding common_peak1_22_176_-0.529144745989488_7.20303317708825_2.35187163252606-2 chr8 124242501 124242932 + 2.35187163252606 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 11322 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_346_3682_-0.105735685608384_11.7937978390955_2.35165376167798 chr1 180386756 180389519 + 2.35165376167798 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -57588 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo unique_peak1_15_45_0.772691307068155_5.90990760959109_2.35156382971581 chr5 117138582 117138994 + 2.35156382971581 NA intron (NM_001081308, intron 1 of 19) intron (NM_001081308, intron 1 of 19) 5200 NM_183306 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding common_peak1_15_45_0.772691307068155_5.90990760959109_2.35156382971581 chr5 76588267 76588599 + 2.35156382971581 NA Intergenic Intergenic -3281 NM_199032 381644 Mm.332452 NM_199032 ENSMUSG00000036403 Cep135 BC062951|Cep4|Gm1044 centrosomal protein 135 protein-coding common_peak1_139_983_0.192155831557006_10.0385924211177_2.35149618833381 chr19 4624842 4626443 + 2.35149618833381 NA promoter-TSS (NM_023131) promoter-TSS (NM_023131) -25 NM_023131 19671 Mm.391143 NM_023131 ENSMUSG00000024889 Rce1 D19Ertd283e|D19Ertd98e Ras converting CAAX endopeptidase 1 protein-coding common_peak2_139_983_0.192155831557006_10.0385924211177_2.35149618833381 chr9 120491769 120493572 + 2.35149618833381 NA promoter-TSS (NM_026892) promoter-TSS (NM_026892) 64 NM_026892 68969 Mm.28753 NM_026892 ENSMUSG00000006941 Eif1b 1500010M16Rik|3110001N14Rik|Gc20 eukaryotic translation initiation factor 1B protein-coding unique_peak2_34_272_-0.411311426396319_7.88710142772169_2.35135453898024 chr2 114136619 114138349 + 2.35135453898024 NA intron (NM_001290788, intron 16 of 33) L1M3|LINE|L1 13086 NR_105968 102465982 NR_105968 ENSMUSG00000098464 Mir7002 Gm27429|mmu-mir-7002 microRNA 7002 ncRNA common_peak1_43_205_0.399909526697089_7.88645529053176_2.35135453898024 chr7 45779608 45780198 + 2.35135453898024 NA Intergenic Intergenic -4044 NM_001005511 381983 Mm.44928 NM_001005511 ENSMUSG00000062044 Lmtk3 BC059845|aatyk3 lemur tyrosine kinase 3 protein-coding common_peak2_29_118_0.513838669289759_7.15173709795282_2.35102576866153 chr5 138193802 138194885 + 2.35102576866153 NA promoter-TSS (NM_177878) promoter-TSS (NM_177878) 29 NM_177878 330216 Mm.19719 NM_177878 ENSMUSG00000049285 Mblac1 - metallo-beta-lactamase domain containing 1 protein-coding common_peak1_29_118_0.513838669289759_7.15173709795282_2.35102576866153 chr8 54467366 54468000 + 2.35102576866153 NA Intergenic ORR1D1|LTR|ERVL-MaLR 62315 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak2_189_1464_0.158397152151958_10.5958835253856_2.35099080331529 chr4 133055288 133058660 + 2.35099080331529 NA intron (NM_146155, intron 3 of 6) intron (NM_146155, intron 3 of 6) 45468 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak2_165_1228_0.172848979982042_10.3496936903637_2.3506616445151 chr1 23921370 23923026 + 2.3506616445151 NA 5' UTR (NM_028534, exon 1 of 10) 5' UTR (NM_028534, exon 1 of 10) 183 NM_028534 98366 Mm.329963 NM_028534 ENSMUSG00000026155 Smap1 1700056O10Rik|4921514B13Rik|4921525H11Rik|AI462175 small ArfGAP 1 protein-coding common_peak1_59_316_0.326929713644653_8.47180388696173_2.35050448430137 chr11 4986894 4987803 + 2.35050448430137 NA intron (NM_001243044, intron 1 of 21) intron (NM_001243044, intron 1 of 21) 524 NM_007454 11764 Mm.274816 NM_007454 ENSMUSG00000009090 Ap1b1 Adtb1|b2b1660Clo adaptor protein complex AP-1, beta 1 subunit protein-coding common_peak1_242_2420_-0.130910764852773_11.1759319815725_2.34992464702098 chr12 105019046 105021535 + 2.34992464702098 NA Intergenic Intergenic -10481 NM_172500 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak2_82_491_0.266991363829108_9.07601018725379_2.34935978687962 chr5 23849889 23851931 + 2.34935978687962 NA intron (NR_045040, intron 1 of 3) CpG 313 NR_045040 67194 Mm.423733 NR_045040 ENSMUSG00000097180 2700038G22Rik - RIKEN cDNA 2700038G22 gene ncRNA common_peak2_24_90_0.578220551937688_6.79690491616754_2.34841915629989 chr4 101202971 101203756 + 2.34841915629989 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 61919 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_24_90_0.578220551937688_6.79690491616754_2.34841915629989-2 chr12 25232036 25232487 + 2.34841915629989 NA Intergenic Intergenic 103087 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak2_24_90_0.578220551937688_6.79690491616754_2.34841915629989 chr2 25121046 25121809 + 2.34841915629989 NA Intergenic L1MB5|LINE|L1 -26222 NM_172204 241275 Mm.218774 NM_172204 ENSMUSG00000036805 Noxa1 NY-CO-31|SDCCAG31 NADPH oxidase activator 1 protein-coding common_peak1_24_90_0.578220551937688_6.79690491616754_2.34841915629989 chr1 154033922 154034597 + 2.34841915629989 NA Intergenic Intergenic 134330 NM_008131 14645 Mm.210745 NM_008131 ENSMUSG00000026473 Glul GS|Glns glutamate-ammonia ligase (glutamine synthetase) protein-coding common_peak1_24_90_0.578220551937688_6.79690491616754_2.34841915629989-4 chr9 51962993 51963503 + 2.34841915629989 NA intron (NM_001301728, intron 1 of 3) CpG 354 NM_007996 14148 Mm.1061 NM_007996 ENSMUSG00000032051 Fdx1 - ferredoxin 1 protein-coding common_peak1_24_90_0.578220551937688_6.79690491616754_2.34841915629989-3 chr15 27673381 27674031 + 2.34841915629989 NA intron (NM_001242424, intron 1 of 8) RMER17C|LTR|ERVK 7836 NM_001242424 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak2_24_90_0.578220551937688_6.79690491616754_2.34841915629989-2 chrX 16618077 16619043 + 2.34841915629989 NA Intergenic CpG -1138 NM_173740 17161 Mm.21108 NM_173740 ENSMUSG00000025037 Maoa 1110061B18Rik|AA407771 monoamine oxidase A protein-coding common_peak1_35_280_-0.403128647161903_7.93286199663997_2.34840859351818 chr2 150362174 150362814 + 2.34840859351818 NA intron (NM_027017, intron 1 of 3) intron (NM_027017, intron 1 of 3) 271 NM_027017 69277 Mm.272470 NM_027017 ENSMUSG00000063364 3300002I08Rik 2900016H11Rik RIKEN cDNA 3300002I08 gene protein-coding common_peak1_361_3349_0.10587424643022_11.7628825034476_2.34793504018725 chr16 11174599 11177538 + 2.34793504018725 NA intron (NR_027502, intron 1 of 22) CpG 325 NR_027502 106205 Mm.226860 NM_145931 ENSMUSG00000037965 Zc3h7a A430104C18Rik|AI447294|AW556219|HSPC055|Zc3h7|Zc3hdc7 zinc finger CCCH type containing 7 A protein-coding common_peak1_273_2347_0.125733174611165_11.2600832804156_2.34642471679014 chr18 80579566 80582183 + 2.34642471679014 NA Intergenic Intergenic -36328 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_115_768_0.215048148923454_9.69436386242355_2.34566306344344 chr11 11808243 11809919 + 2.34566306344344 NA promoter-TSS (NM_021891) promoter-TSS (NM_021891) -119 NM_001163360 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding common_peak1_134_1222_-0.185895534809472_10.1632609211227_2.34523676113735 chr11 70687287 70688671 + 2.34523676113735 NA TTS (NM_001252484) TTS (NM_001252484) 126 NM_001190376 216874 Mm.473726 NM_178116 ENSMUSG00000040712 Camta2 Kiaa0909-hp|mKIAA0909 calmodulin binding transcription activator 2 protein-coding unique_peak2_11_92_-0.751995654202291_6.16316098400689_2.3452191882619-2 chr15 84987423 84988093 + 2.3452191882619 NA exon (NM_001033273, exon 1 of 10) exon (NM_001033273, exon 1 of 10) 213 NM_001033273 223739 Mm.323925 NM_001033273 ENSMUSG00000036046 5031439G07Rik AW554572|mKIAA0930 RIKEN cDNA 5031439G07 gene protein-coding unique_peak2_11_92_-0.751995654202291_6.16316098400689_2.3452191882619-3 chr2 25852537 25853376 + 2.3452191882619 NA Intergenic Intergenic -5708 NM_001001714 227631 Mm.301632 NM_001001714 ENSMUSG00000059625 Sohlh1 Gm110|Nohlh spermatogenesis and oogenesis specific basic helix-loop-helix 1 protein-coding unique_peak2_11_92_-0.751995654202291_6.16316098400689_2.3452191882619-4 chr7 79341103 79341702 + 2.3452191882619 NA intron (NM_018811, intron 5 of 10) IAPEz-int|LTR|ERVK 45625 NM_020599 19771 Mm.41653 NM_020599 ENSMUSG00000039194 Rlbp1 3110056M11Rik|CRALBP retinaldehyde binding protein 1 protein-coding unique_peak2_11_92_-0.751995654202291_6.16316098400689_2.3452191882619 chr11 67633583 67634273 + 2.3452191882619 NA intron (NM_001277080, intron 3 of 12) intron (NM_001277080, intron 3 of 12) 37373 NM_001277079 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_194_1871_-0.149315683097225_10.7957068780348_2.34521425550803 chr12 64964727 64966906 + 2.34521425550803 NA promoter-TSS (NM_025707) promoter-TSS (NM_025707) 74 NM_177805 328108 Mm.138465 NM_177805 ENSMUSG00000035614 Fam179b A430041B07Rik|BC062107|C130034K06|mKIAA0423 family with sequence similarity 179, member B protein-coding common_peak2_127_874_0.202950989964545_9.87461470170196_2.34479637931174 chr13 30659347 30661110 + 2.34479637931174 NA intron (NM_001037955, intron 1 of 6) intron (NM_001037955, intron 1 of 6) 169 NM_134068 105352 Mm.289646 NM_134068 ENSMUSG00000069255 Dusp22 JKAP|JSP1|LMW-DSP2|MKPX dual specificity phosphatase 22 protein-coding common_peak2_313_2794_0.115455377861455_11.5063602566613_2.3438533663868 chr6 117915411 117919762 + 2.3438533663868 NA 5' UTR (NM_001166432, exon 2 of 4) 5' UTR (NM_001166432, exon 2 of 4) 292 NM_001166427 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_57_301_0.336870886373847_8.406840182512_2.34347442893806 chr14 78731965 78733113 + 2.34347442893806 NA Intergenic CpG -7450 NM_001081336 380921 Mm.89591 NM_001081336 ENSMUSG00000034731 Dgkh 5930402B05Rik|D130015C16|DGK diacylglycerol kinase, eta protein-coding common_peak2_121_821_0.208137178551645_9.78706317295751_2.34323746841888 chr5 115272042 115273461 + 2.34323746841888 NA 5' UTR (NM_001302449, exon 1 of 17) 5' UTR (NM_001302449, exon 1 of 17) 144 NM_016698 50849 Mm.30051 NM_016698 ENSMUSG00000041740 Rnf10 AA675014|RIE2|mKIAA0262 ring finger protein 10 protein-coding common_peak2_90_556_0.250811525380016_9.24693928003004_2.34313101323789 chr13 41015763 41017206 + 2.34313101323789 NA intron (NM_025387, intron 1 of 5) CpG 234 NM_025387 66154 Mm.30005 NM_025387 ENSMUSG00000021361 Tmem14c 1110021D01Rik|AU020193|HSPC194 transmembrane protein 14C protein-coding common_peak2_230_1885_0.139742096251254_10.9509850088007_2.34284627651023 chr11 118134921 118137880 + 2.34284627651023 NA Intergenic Intergenic -7181 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak1_175_1660_-0.158201681709357_10.6187355171077_2.34273396587856 chr9 66918265 66919973 + 2.34273396587856 NA intron (NM_173413, intron 1 of 7) intron (NM_173413, intron 1 of 7) 586 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak1_122_1098_-0.196397889730521_10.003776726084_2.34220678234432 chr13 95696083 95698500 + 2.34220678234432 NA intron (NM_010170, intron 1 of 1) intron (NM_010170, intron 1 of 1) 371 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak1_125_1129_-0.193885586164411_10.0451642642203_2.34179607508183 chr7 67424782 67426709 + 2.34179607508183 NA Intergenic Intergenic -52887 NM_001291195 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak1_108_707_0.22413668544664_9.57967389280632_2.34152365229056 chr2 167648055 167649482 + 2.34152365229056 NA intron (NM_145538, intron 2 of 5) intron (NM_145538, intron 2 of 5) 12776 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding common_peak1_81_483_0.269192338977188_9.05345940676319_2.34105675082354 chr1 44950979 44951396 + 2.34105675082354 NA Intergenic (CTATT)n|Simple_repeat|Simple_repeat -206238 NR_040602 75066 Mm.416932 NR_040602 ENSMUSG00000101701 4930521E06Rik - RIKEN cDNA 4930521E06 gene ncRNA unique_peak2_23_183_-0.509786487964918_7.26866871207455_2.34077735834373 chr19 6995429 6996834 + 2.34077735834373 NA promoter-TSS (NM_153597) promoter-TSS (NM_153597) 0 NM_153597 107328 Mm.391161 NM_153597 ENSMUSG00000047656 Trpt1 AU079016|AW045591|Tpt1|Tpt1h tRNA phosphotransferase 1 protein-coding common_peak1_23_183_-0.509786487964918_7.26866871207455_2.34077735834373 chr11 69078332 69078889 + 2.34077735834373 NA Intergenic MLT1K|LTR|ERVL-MaLR 7801 NM_028336 66910 Mm.33964 NM_025838 ENSMUSG00000020895 Tmem107 1110004B13Rik|2810049P21Rik transmembrane protein 107 protein-coding common_peak1_73_617_-0.265067065506608_9.13892949515107_2.3407382930185 chr6 108536032 108537111 + 2.3407382930185 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 46828 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_50_409_-0.331809322377989_8.51357543831645_2.34065317895795 chr7 30402180 30404554 + 2.34065317895795 NA Intergenic Intergenic -10421 NM_011662 22177 Mm.46301 NM_011662 ENSMUSG00000030579 Tyrobp DAP12|KARAP|Ly83 TYRO protein tyrosine kinase binding protein protein-coding common_peak1_78_664_-0.255111439275236_9.24965481075093_2.33977743681424 chr19 42147196 42148622 + 2.33977743681424 NA exon (NM_183195, exon 1 of 2) exon (NM_183195, exon 1 of 2) 520 NM_183195 277010 Mm.206250 NM_183195 ENSMUSG00000044345 Marveld1 AI504298|Mrvldc1 MARVEL (membrane-associating) domain containing 1 protein-coding common_peak1_109_966_-0.20946874990457_9.81263770452456_2.33930870777642 chr9 110131284 110132701 + 2.33930870777642 NA promoter-TSS (NM_009211) promoter-TSS (NM_009211) -32 NM_009211 20588 Mm.85410 NM_009211 ENSMUSG00000032481 Smarcc1 AI115498|BAF155|Rsc8|SRG3|msp3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein-coding common_peak1_684_7503_0.0709990308978039_12.9089436279643_2.33919781928131 chr7 30417011 30423860 + 2.33919781928131 NA promoter-TSS (NM_011827) promoter-TSS (NM_011827) -581 NM_011827 23900 Mm.379050 NM_011827 ENSMUSG00000064109 Hcst DAP10|KAP10 hematopoietic cell signal transducer protein-coding common_peak1_49_400_-0.334830923132179_8.48004296488883_2.33903660266551 chr9 118070399 118071560 + 2.33903660266551 NA intron (NM_026442, intron 3 of 3) intron (NM_026442, intron 3 of 3) 30457 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_280_2424_0.123822455239209_11.3056802595815_2.33871115662413 chr8 125052251 125055446 + 2.33871115662413 NA promoter-TSS (NM_174854) promoter-TSS (NM_174854) -347 NM_174853 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding common_peak1_36_289_-0.400125438803524_7.97984637061317_2.33841291674809 chr5 107646287 107646971 + 2.33841291674809 NA intron (NM_001289569, intron 11 of 12) intron (NM_001289569, intron 11 of 12) -12779 NR_046195 78443 Mm.490703 NR_046195 ENSMUSG00000085900 A930041C12Rik - RIKEN cDNA A930041C12 gene ncRNA common_peak1_244_2033_0.134877859931505_11.0575428938233_2.3378500380559 chr9 89197048 89200832 + 2.3378500380559 NA promoter-TSS (NM_007534) promoter-TSS (NM_007534) -333 NM_007534 12045 Mm.479217 NM_007534 ENSMUSG00000089929 Bcl2a1b A1-b B cell leukemia/lymphoma 2 related protein A1b protein-coding common_peak2_56_294_0.339927575300969_8.37453493189969_2.3376152870163 chr10 118549763 118551080 + 2.3376152870163 NA intron (NR_104123, intron 1 of 4) ORR1B2|LTR|ERVL-MaLR 6104 NR_104123 103214 Mm.30529 NR_104123 Tmevpg1 AI447422 Theiler's murine encephalomyelitis virus persistence candidate gene 1 ncRNA common_peak2_136_1243_-0.184433213595744_10.1885541633327_2.33677629871728 chr3 88552110 88554514 + 2.33677629871728 NA promoter-TSS (NM_031248) promoter-TSS (NM_031248) -385 NM_031248 83409 Mm.41680 NM_031248 ENSMUSG00000028062 Lamtor2 2010111E04Rik|AL022628|Mapbpip|P14|Rab25|Robld3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 protein-coding common_peak2_114_759_0.216710782640883_9.67821099965139_2.3363751692051 chr11 106164737 106168364 + 2.3363751692051 NA intron (NM_028126, intron 8 of 10) intron (NM_028126, intron 8 of 10) -6408 NM_172397 67803 Mm.21687 NM_172397 ENSMUSG00000040699 Limd2 0610025L06Rik|AI413966 LIM domain containing 2 protein-coding common_peak2_97_614_0.239045947870439_9.38396557416182_2.3361608855013 chr14 31205339 31207527 + 2.3361608855013 NA intron (NM_022656, intron 1 of 20) CpG 393 NM_022656 64652 Mm.298728 NM_022656 ENSMUSG00000021910 Nisch 1200007D05Rik|3202002H23Rik|AW494485|I-1 nischarin protein-coding common_peak1_250_2098_0.132311029521844_11.1016419660531_2.33594687496326 chr12 55154420 55156378 + 2.33594687496326 NA 5' UTR (NM_001100109, exon 1 of 16).2 5' UTR (NM_001100109, exon 1 of 16).2 295 NM_001100109 665155 Mm.12848 NM_001100109 ENSMUSG00000079108 Srp54b - signal recognition particle 54B protein-coding common_peak1_407_3900_0.0978794276619617_11.9785679968555_2.33507778221551 chr7 64047456 64051334 + 2.33507778221551 NA Intergenic Intergenic -104440 NM_001039104 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak2_104_673_0.228975449494961_9.51109250592934_2.33500487292328-2 chr6 29347335 29348845 + 2.33500487292328 NA promoter-TSS (NM_007594) promoter-TSS (NM_007594) -16 NM_007594 12321 Mm.392075 NM_007594 ENSMUSG00000029767 Calu 9530075H20Rik calumenin protein-coding common_peak2_104_673_0.228975449494961_9.51109250592934_2.33500487292328 chr4 48278725 48280669 + 2.33500487292328 NA promoter-TSS (NM_029572) promoter-TSS (NM_029572) -63 NM_010569 16348 Mm.317706 NM_010569 ENSMUSG00000028344 Invs Nphp2|inv inversin protein-coding common_peak2_179_1704_-0.156152763974191_10.6574796419244_2.33489686316906 chr8 120666998 120669389 + 2.33489686316906 NA promoter-TSS (NM_001293559) promoter-TSS (NM_001293559) -32 NM_009941 12857 Mm.386758 NM_009941 ENSMUSG00000031818 Cox4i1 AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1 cytochrome c oxidase subunit IV isoform 1 protein-coding common_peak2_144_1327_-0.178270529956036_10.2859041663689_2.33476654861367 chr13 91223271 91224748 + 2.33476654861367 NA promoter-TSS (NM_025770) promoter-TSS (NM_025770) -22 NM_025770 66795 Mm.235385 NM_025770 ENSMUSG00000021619 Atg10 5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l autophagy related 10 protein-coding common_peak1_325_2931_0.112787366973915_11.5740630716208_2.33460513638299 chr14 75179512 75182407 + 2.33460513638299 NA intron (NM_008879, intron 2 of 16) intron (NM_008879, intron 2 of 16) 44534 NM_008879 18826 Mm.153911 NM_008879 ENSMUSG00000021998 Lcp1 AW536232|D14Ertd310e|LCP-1|Pls2|pp65 lymphocyte cytosolic protein 1 protein-coding common_peak1_28_223_-0.458691607545036_7.57800911828509_2.33447269624823 chr7 73552511 73552993 + 2.33447269624823 NA intron (NR_037569, intron 3 of 4) intron (NR_037569, intron 3 of 4) 5643 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA unique_peak1_21_74_0.630979052198071_6.54430821659492_2.3338190011977 chr18 67258854 67259377 + 2.3338190011977 NA Intergenic Intergenic -13285 NM_172630 225651 Mm.235792 NM_172630 ENSMUSG00000062526 Mppe1 A530095G11 metallophosphoesterase 1 protein-coding unique_peak1_21_74_0.630979052198071_6.54430821659492_2.3338190011977-2 chr4 26338959 26339409 + 2.3338190011977 NA intron (NM_172865, intron 2 of 4) intron (NM_172865, intron 2 of 4) 7468 NM_172865 242362 Mm.245602 NM_172865 ENSMUSG00000040520 Manea 4932703L02Rik mannosidase, endo-alpha protein-coding common_peak2_21_74_0.630979052198071_6.54430821659492_2.3338190011977 chr13 43218526 43219246 + 2.3338190011977 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -47385 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_21_74_0.630979052198071_6.54430821659492_2.3338190011977 chr4 141536533 141537048 + 2.3338190011977 NA intron (NM_019763, intron 1 of 15) CpG 1807 NM_019763 56381 Mm.299906 NM_019763 ENSMUSG00000040761 Spen Mint|mKIAA0929 SPEN homolog, transcriptional regulator (Drosophila) protein-coding common_peak2_89_548_0.252128609745789_9.22672664387809_2.33350810187613 chr1 92774201 92775662 + 2.33350810187613 NA Intergenic Intergenic -56755 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_89_548_0.252128609745789_9.22672664387809_2.33350810187613-2 chr4 138463041 138465193 + 2.33350810187613 NA Intergenic Intergenic 8969 NM_025451 66259 Mm.41603 NM_025451 ENSMUSG00000046447 Camk2n1 1810006K23Rik|AI848599|AI891706 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding common_peak1_93_581_0.244868055704092_9.30730937076033_2.33336525792794 chr1 131867154 131868147 + 2.33336525792794 NA 5' UTR (NM_144875, exon 2 of 6) 5' UTR (NM_144875, exon 2 of 6) 373 NM_144875 226422 Mm.34027 NM_144875 ENSMUSG00000026433 Rab29 Rab7l1 RAB29, member RAS oncogene family protein-coding common_peak1_201_1586_0.15137409195663_10.7077734588135_2.33333115582062 chr2 35978516 35979823 + 2.33333115582062 NA intron (NM_029774, intron 1 of 9) CpG 455 NM_029774 74410 Mm.21591 NM_028921 ENSMUSG00000026885 Ttll11 4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e tubulin tyrosine ligase-like family, member 11 protein-coding common_peak1_40_322_-0.373947089628499_8.14841680987968_2.33316782431384 chr18 73541825 73542557 + 2.33316782431384 NA Intergenic Intergenic -30514 NM_001039214 240396 Mm.24131 NM_001039214 ENSMUSG00000037253 Mex3c A130001D14Rik|BC035207|BM-013|Rkhd2 mex3 RNA binding family member C protein-coding common_peak2_66_552_-0.280591970084984_8.97083968519222_2.33311516730351 chr7 19572383 19574194 + 2.33311516730351 NA promoter-TSS (NM_027189) promoter-TSS (NM_027189) 55 NM_027189 69731 Mm.24540 NM_027189 ENSMUSG00000044709 Gemin7 2400008I04Rik|AI120175|AI461688 gem (nuclear organelle) associated protein 7 protein-coding common_peak2_45_365_-0.350626723004178_8.34038647678195_2.33215464063693 chr14 121404932 121406661 + 2.33215464063693 NA Intergenic B3|SINE|B2 -26566 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_86_740_-0.240531901639981_9.41306378148584_2.33169535589517 chr10 93444028 93445396 + 2.33169535589517 NA Intergenic URR1B|DNA|hAT-Charlie -8684 NM_001313897 16993 Mm.271071 NM_008517 ENSMUSG00000015889 Lta4h - leukotriene A4 hydrolase protein-coding common_peak2_46_374_-0.347615697957226_8.37693893640463_2.33149824473152 chr18 24055537 24057700 + 2.33149824473152 NA Intergenic Intergenic -35847 NM_021559 59057 Mm.417427 NM_021559 ENSMUSG00000051469 Zfp24 3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Zfp191|Znf191|Znf24|Znp191 zinc finger protein 24 protein-coding common_peak1_18_59_0.693473607788372_6.2536273995027_2.33139888666128 chr11 67579228 67579727 + 2.33139888666128 NA intron (NM_008088, intron 1 of 13) intron (NM_008088, intron 1 of 13) -7023 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_18_59_0.693473607788372_6.2536273995027_2.33139888666128-2 chr12 8854033 8854418 + 2.33139888666128 NA Intergenic Intergenic -67082 NM_008640 17775 Mm.30071 NM_008640 ENSMUSG00000020585 Laptm4a AA286466|LAPTM4|MTP|Mtrp|mKIAA0108 lysosomal-associated protein transmembrane 4A protein-coding common_peak1_18_59_0.693473607788372_6.2536273995027_2.33139888666128-3 chr15 78613652 78614109 + 2.33139888666128 NA intron (NM_028195, intron 8 of 12) RSINE1|SINE|B4 16833 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak1_18_59_0.693473607788372_6.2536273995027_2.33139888666128-5 chr7 19010325 19010796 + 2.33139888666128 NA Intergenic Intergenic 6495 NM_178757 272359 Mm.274237 NM_178757 ENSMUSG00000044030 Irf2bp1 6330414O09Rik|C530033F24 interferon regulatory factor 2 binding protein 1 protein-coding common_peak1_18_59_0.693473607788372_6.2536273995027_2.33139888666128-4 chr2 27025308 27025748 + 2.33139888666128 NA intron (NM_001177627, intron 3 of 8) intron (NM_001177627, intron 3 of 8) 2470 NM_172659 227659 Mm.41203 NM_172659 ENSMUSG00000036067 Slc2a6 A330096C23|F630103L12Rik|Glut6|Glut9 solute carrier family 2 (facilitated glucose transporter), member 6 protein-coding common_peak1_39_314_-0.381461479570147_8.10847727860221_2.33135152746746 chr8 117547992 117548841 + 2.33135152746746 NA intron (NM_172285, intron 2 of 32) PB1D10|SINE|Alu 50125 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak1_17_137_-0.603839094905502_6.80660490932542_2.33020829259541 chr3 89090102 89090537 + 2.33020829259541 NA promoter-TSS (NM_001083808) promoter-TSS (NM_001083808) -288 NM_001083808 72296 Mm.27687 NM_028188 ENSMUSG00000041263 Rusc1 2210403N08Rik|AA408288|NESCA RUN and SH3 domain containing 1 protein-coding common_peak1_159_1486_-0.167217770862575_10.4545800466211_2.33020196034193 chr17 33908474 33910123 + 2.33020196034193 NA promoter-TSS (NM_007829) promoter-TSS (NM_007829) -120 NR_045146 407803 Mm.250393 NR_045146 ENSMUSG00000092564 BC051226 - cDNA sequence BC051226 ncRNA common_peak1_154_1433_-0.171041517089277_10.4003085501573_2.33016199784416 chr14 47276191 47277786 + 2.33016199784416 NA promoter-TSS (NM_172598) promoter-TSS (NM_172598) -131 NM_172598 218973 Mm.265615 NM_172598 ENSMUSG00000037572 Wdhd1 A630092E18|AND-1|D630024B06Rik WD repeat and HMG-box DNA binding protein 1 protein-coding common_peak2_107_699_0.224221077379978_9.56332165052232_2.33015561382683 chr11 101252843 101254499 + 2.33015561382683 NA promoter-TSS (NM_026776) promoter-TSS (NM_026776) -36 NM_001284412 28084 Mm.301020 NM_026776 ENSMUSG00000078656 Vps25 1110020N13Rik|AW107467|D11Wsu68e vacuolar protein sorting 25 protein-coding common_peak2_205_1626_0.150161659290569_10.7430793653178_2.32981881986567 chr18 60525261 60527241 + 2.32981881986567 NA promoter-TSS (NM_026302) promoter-TSS (NM_026302) 30 NM_026302 67665 Mm.272801 NM_026302 ENSMUSG00000024603 Dctn4 1110001K06Rik|4930547K17Rik|C130039E17Rik|p62 dynactin 4 protein-coding common_peak1_187_1445_0.158503872847614_10.5771037733749_2.32950372749675 chr4 155943079 155944755 + 2.32950372749675 NA promoter-TSS (NM_001284312) promoter-TSS (NM_001284312) 104 NM_021402 140499 Mm.371673 NM_021402 ENSMUSG00000023286 Ube2j2 1200007B18Rik|2400008G19Rik|5730472G04Rik|AL022923|NCUBE-2|Ubc6|Ubc6p ubiquitin-conjugating enzyme E2J 2 protein-coding common_peak1_63_345_0.314849657861155_8.5920530565673_2.32948089236044 chr12 105031387 105032393 + 2.32948089236044 NA promoter-TSS (NR_028576) promoter-TSS (NR_028576) 389 NR_003145 69434 Mm.380736 NR_003145 Snhg10 1700026B20Rik|AI642517 small nucleolar RNA host gene 10 ncRNA common_peak1_432_4206_0.0941723349128978_12.0856622702252_2.32942401401262 chr13 37541733 37545435 + 2.32942401401262 NA Intergenic Intergenic 198239 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding common_peak1_43_348_-0.360673172329346_8.26674664004498_2.32909860912704 chr14 54712564 54713287 + 2.32909860912704 NA promoter-TSS (NM_207131) promoter-TSS (NM_207131) -751 NM_207131 110794 Mm.236223 NM_207131 ENSMUSG00000052435 Cebpe C/EBPe|CRP1|Gm294 CCAAT/enhancer binding protein (C/EBP), epsilon protein-coding common_peak1_80_476_0.268496626987368_9.03209376949919_2.32902108431796 chr17 22314341 22315212 + 2.32902108431796 NA Intergenic Intergenic 46624 NM_176962 319615 Mm.442162 NM_176962 ENSMUSG00000033972 Zfp944 6330416L07Rik zinc finger protein 944 protein-coding common_peak2_80_476_0.268496626987368_9.03209376949919_2.32902108431796 chr15 75840938 75842720 + 2.32902108431796 NA promoter-TSS (NM_172121) promoter-TSS (NM_172121) 79 NM_172121 223642 Mm.209800 NM_172121 ENSMUSG00000075600 Zc3h3 BC049953|Kiaa0150|Smicl|Zc3hdc3 zinc finger CCCH type containing 3 protein-coding common_peak2_199_1926_-0.146288730600268_10.8389964909956_2.32857843590789 chr9 88480894 88483432 + 2.32857843590789 NA 5' UTR (NM_001284328, exon 1 of 12) 5' UTR (NM_001284328, exon 1 of 12) 234 NM_019666 56403 Mm.260545 NM_019666 ENSMUSG00000032423 Syncrip 2610109K23Rik|4632417O19Rik|GRY-RBP|Nsap1|Nsap1l|hnRNP Q|pp68 synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding common_peak1_158_1162_0.17624090012318_10.2717558315348_2.32854446096788 chr11 16507487 16509038 + 2.32854446096788 NA 5' UTR (NM_001109972, exon 1 of 4) 5' UTR (NM_001109972, exon 1 of 4) 222 NM_011343 20335 Mm.325350 NM_011343 ENSMUSG00000078974 Sec61g - SEC61, gamma subunit protein-coding unique_peak2_7_64_-0.952726861089642_5.54600438248363_2.32761566727507 chr11 55097923 55098528 + 2.32761566727507 NA exon (NM_010299, exon 1 of 4) exon (NM_010299, exon 1 of 4) 240 NM_010299 14667 Mm.287807 NM_010299 ENSMUSG00000000594 Gm2a AA408702|AW215435|GM2-AP|SAP-3 GM2 ganglioside activator protein protein-coding unique_peak2_7_64_-0.952726861089642_5.54600438248363_2.32761566727507-2 chr4 89688603 89689208 + 2.32761566727507 NA exon (NM_175647, exon 1 of 2) exon (NM_175647, exon 1 of 2) 707 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak1_54_280_0.346864698164989_8.30785866930342_2.32712076387608 chr2 145903158 145903888 + 2.32712076387608 NA intron (NM_026425, intron 1 of 5) CpG 282 NM_001141965 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding common_peak2_71_598_-0.268502208543406_9.09216108851708_2.3268479753892 chr18 65311823 65313572 + 2.3268479753892 NA intron (NM_001037294, intron 4 of 12) intron (NM_001037294, intron 4 of 12) 63836 NR_029600 387231 NR_029600 ENSMUSG00000065402 Mir122 Mir122a|Mirn122a|mir-122|mmu-mir-122 microRNA 122 ncRNA common_peak2_69_390_0.297033228402537_8.75954141150862_2.32636712574608 chr15 103252193 103254302 + 2.32636712574608 NA promoter-TSS (NM_001302343) promoter-TSS (NM_001302343) -95 NM_001302343 18022 Mm.457989 NM_008685 ENSMUSG00000058794 Nfe2 NF-E2|NF-E2/P45|p45|p45NFE2|p45nf-e2 nuclear factor, erythroid derived 2 protein-coding common_peak1_69_390_0.297033228402537_8.75954141150862_2.32636712574608 chr11 106707636 106708785 + 2.32636712574608 NA intron (NM_001305158, intron 2 of 14) intron (NM_001305158, intron 2 of 14) 7071 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak1_150_1086_0.182384159958243_10.1773283050064_2.32581751605257 chr7 140035578 140036998 + 2.32581751605257 NA promoter-TSS (NM_027201) promoter-TSS (NM_027201) 62 NM_133755 74237 Mm.40888 NM_133755 ENSMUSG00000025474 Tubgcp2 1700022B05Rik tubulin, gamma complex associated protein 2 protein-coding common_peak1_96_606_0.239785657107728_9.36544553480955_2.32568525762888 chr2 35131978 35133096 + 2.32568525762888 NA intron (NM_001290635, intron 1 of 8) intron (NM_001290635, intron 1 of 8) 303 NM_001290635 26920 Mm.231332 NM_012018 ENSMUSG00000057110 Cntrl 6720467O09Rik|AA968343|Cep1|Cep110|IB3/5|Ma2a8|b2b1468.1Clo|b2b1468Clo centriolin protein-coding common_peak1_65_543_-0.283530582403102_8.94569755004879_2.32565335815062 chr11 101732866 101733821 + 2.32565335815062 NA intron (NM_144831, intron 1 of 22) intron (NM_144831, intron 1 of 22) 387 NM_144831 217207 Mm.28186 NM_144831 ENSMUSG00000034931 Dhx8 Ddx8|mDEAH6|mKIAA4096 DEAH (Asp-Glu-Ala-His) box polypeptide 8 protein-coding common_peak2_85_730_-0.241388114512132_9.39303353869637_2.32405495887364 chr1 193246949 193250276 + 2.32405495887364 NA intron (NM_008288, intron 1 of 6) RLTR14-int|LTR|ERV1 -6252 NM_001044751 15483 Mm.28328 NM_008288 ENSMUSG00000016194 Hsd11b1 - hydroxysteroid 11-beta dehydrogenase 1 protein-coding common_peak1_142_1012_0.18777188778129_10.0783044026918_2.3239749769948 chr7 44495657 44497182 + 2.3239749769948 NA promoter-TSS (NM_197991) promoter-TSS (NM_197991) 94 NM_197991 69683 Mm.294759 NM_197991 ENSMUSG00000008140 Emc10 2310044H10Rik|5430410O10Rik|Inm02|Mirta22 ER membrane protein complex subunit 10 protein-coding common_peak1_29_231_-0.449324562529869_7.63331871386264_2.32384882561915 chr5 30921415 30922014 + 2.32384882561915 NA TTS (NM_133918) TTS (NM_133918) 155 NM_001310524 16548 Mm.22451 NM_008439 ENSMUSG00000029162 Khk - ketohexokinase protein-coding common_peak2_165_1229_0.171675580128102_10.3502803902907_2.32384428722076 chr14 47187261 47190062 + 2.32384428722076 NA intron (NM_008102, intron 1 of 5) intron (NM_008102, intron 1 of 5) 741 NM_008102 14528 Mm.10651 NM_008102 ENSMUSG00000037580 Gch1 GTP-CH|GTPCH|Gch GTP cyclohydrolase 1 protein-coding unique_peak2_20_160_-0.553442234316119_7.05419576095656_2.32330509436493 chr12 86970767 86971875 + 2.32330509436493 NA Intergenic MTB|LTR|ERVL-MaLR 17355 NM_001080943 238331 Mm.185890 NM_001080943 ENSMUSG00000048483 Zdhhc22 Gm262 zinc finger, DHHC-type containing 22 protein-coding unique_peak2_20_160_-0.553442234316119_7.05419576095656_2.32330509436493-2 chrX 101260258 101261779 + 2.32330509436493 NA TTS (NM_001033362) TTS (NM_001033362) 2974 NM_001033362 245536 Mm.212463 NM_001033362 ENSMUSG00000090141 Gm614 - predicted gene 614 protein-coding common_peak1_123_1108_-0.195136823054691_10.0174752386344_2.32252216333473 chr6 125483657 125484936 + 2.32252216333473 NA intron (NM_007657, intron 1 of 7) intron (NM_007657, intron 1 of 7) 10459 NM_007657 12527 Mm.210676 NM_007657 ENSMUSG00000030342 Cd9 Tspan29 CD9 antigen protein-coding common_peak2_106_690_0.226428518967515_9.54575615987202_2.32151919643465 chr10 81523209 81525988 + 2.32151919643465 NA promoter-TSS (NM_010304) promoter-TSS (NM_010304) -373 NM_010304 14676 Mm.1546 NM_010304 ENSMUSG00000034792 Gna15 G[a]15|Galpha15 guanine nucleotide binding protein, alpha 15 protein-coding common_peak1_25_96_0.555508402453804_6.87766704341403_2.32119236205289 chr1 161396829 161397260 + 2.32119236205289 NA intron (NM_009452, intron 1 of 2) intron (NM_009452, intron 1 of 2) 1606 NM_009452 22164 Mm.4994 NM_009452 ENSMUSG00000026700 Tnfsf4 Ath-1|Ath1|CD134L|OX-40L|Ox40l|TXGP1|Tnlg2b|Txgp1l|gp34 tumor necrosis factor (ligand) superfamily, member 4 protein-coding common_peak1_25_96_0.555508402453804_6.87766704341403_2.32119236205289-3 chr5 64816150 64816681 + 2.32119236205289 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 12892 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_25_96_0.555508402453804_6.87766704341403_2.32119236205289-2 chr18 37883764 37884307 + 2.32119236205289 NA intron (NM_001305981, intron 18 of 28) intron (NM_001305981, intron 18 of 28) -29375 NR_105945 102465592 NR_105945 ENSMUSG00000098706 Mir6979 Gm27524|mmu-mir-6979 microRNA 6979 ncRNA common_peak1_56_461_-0.307250321865885_8.69812388048312_2.32108101681842 chr17 31060103 31061027 + 2.32108101681842 NA intron (NM_009593, intron 1 of 14) intron (NM_009593, intron 1 of 14) 2871 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak2_79_468_0.270914737488113_9.00890148125943_2.32096772777922 chr2 90916973 90918396 + 2.32096772777922 NA exon (NM_025576, exon 1 of 4) exon (NM_025576, exon 1 of 4) 366 NM_025576 66461 Mm.23926 NM_025576 Ptpmt1 1110001D10Rik|2810004N20Rik|PLIP protein tyrosine phosphatase, mitochondrial 1 protein-coding common_peak1_107_946_-0.211788426256078_9.78132640234035_2.31966326237209 chr9 65201297 65202545 + 2.31966326237209 NA Intergenic Intergenic -12769 NM_177460 214424 Mm.31129 NM_177460 ENSMUSG00000032392 Parp16 ARTD15|BC055447|C79952|PARP-16 poly (ADP-ribose) polymerase family, member 16 protein-coding common_peak1_137_1253_-0.183114001368889_10.2007646321176_2.31948675046142 chr15 9070571 9072315 + 2.31948675046142 NA 5' UTR (NM_001085410, exon 1 of 14) 5' UTR (NM_001085410, exon 1 of 14) 183 NM_001040395 68646 Mm.244226 NM_001040395 ENSMUSG00000022253 Nadk2 MNADK|Nadkd1 NAD kinase 2, mitochondrial protein-coding common_peak1_24_191_-0.498947308584772_7.33548884642877_2.31938814053781-2 chr8 119574886 119575339 + 2.31938814053781 NA promoter-TSS (NM_026648) promoter-TSS (NM_026648) 88 NM_175185 72552 Mm.36756 NM_175185 ENSMUSG00000034189 Hsdl1 2700067E09Rik hydroxysteroid dehydrogenase like 1 protein-coding common_peak2_32_136_0.479287864700353_7.3376760153107_2.31938814053781 chr10 67503247 67504424 + 2.31938814053781 NA Intergenic Intergenic -34034 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding common_peak1_32_136_0.479287864700353_7.3376760153107_2.31938814053781 chr2 13415502 13416162 + 2.31938814053781 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 76044 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak1_24_191_-0.498947308584772_7.33548884642877_2.31938814053781 chr12 99884538 99885083 + 2.31938814053781 NA intron (NM_028354, intron 1 of 15) CpG 295 NM_028354 104884 Mm.312323 NM_028354 ENSMUSG00000021177 Tdp1 2810481F14Rik|4921509N21Rik|AI838772|AW493413|E430034L06Rik|MLZ-501|SCAN1 tyrosyl-DNA phosphodiesterase 1 protein-coding common_peak2_32_136_0.479287864700353_7.3376760153107_2.31938814053781-2 chr2 49733154 49734079 + 2.31938814053781 NA intron (NM_008449, intron 15 of 25) intron (NM_008449, intron 15 of 25) -54070 NM_027990 71897 Mm.41381 NM_027990 ENSMUSG00000026765 Lypd6b 2310010M24Rik|AW049525 LY6/PLAUR domain containing 6B protein-coding common_peak1_52_266_0.355045833755558_8.23821884856533_2.31846046132482 chr2 30967310 30968223 + 2.31846046132482 NA exon (NM_144884, exon 1 of 5) exon (NM_144884, exon 1 of 5) 152 NM_144884 30931 Mm.154994 NM_144884 ENSMUSG00000026849 Tor1a DQ2|Dyt1|torsinA torsin family 1, member A (torsin A) protein-coding common_peak1_134_1221_-0.184715416100815_10.1626708617683_2.31837975261387 chr1 170980849 170983332 + 2.31837975261387 NA Intergenic ORR1A2|LTR|ERVL-MaLR -6019 NM_010187 14130 Mm.425062 NM_010187 ENSMUSG00000026656 Fcgr2b AI528646|CD32|F630109E10Rik|Fc[g]RII|FcgRII|Fcgr2|Fcgr2a|Fcr-2|Fcr-3|Ly-17|Ly-m20|LyM-1|Lym-1|fcRII Fc receptor, IgG, low affinity IIb protein-coding common_peak2_70_589_-0.271411598402187_9.06886534504811_2.31828186541299 chr2 164866551 164869410 + 2.31828186541299 NA Intergenic RSINE1|SINE|B4 -10272 NM_011125 18830 Mm.6105 NM_011125 ENSMUSG00000017754 Pltp Bpife|OD107 phospholipid transfer protein protein-coding common_peak2_167_1249_0.169599197808118_10.3725119784535_2.31819991082852 chr3 87929191 87931182 + 2.31819991082852 NA promoter-TSS (NM_177663) promoter-TSS (NM_177663) 9 NM_153562 229503 Mm.296008 NM_153562 ENSMUSG00000004896 Rrnad1 - ribosomal RNA adenine dimethylase domain containing 1 protein-coding common_peak1_75_635_-0.259294129514752_9.18323589052698_2.31800140131813 chr19 5964267 5965476 + 2.31800140131813 NA promoter-TSS (NM_001164057) promoter-TSS (NM_001164057) -665 NM_008893 18969 Mm.209931 NM_008893 ENSMUSG00000024833 Pola2 AI573378 polymerase (DNA directed), alpha 2 protein-coding common_peak2_150_1389_-0.172348782625319_10.3546947762982_2.31766515634866 chr3 103967370 103969242 + 2.31766515634866 NA promoter-TSS (NM_001163468) promoter-TSS (NM_001163468) 10 NR_030676 100125931 Mm.400392 NR_030676 ENSMUSG00000089998 Phtf1os A130049A11Rik putative homeodomain transcription factor 1, opposite strand ncRNA common_peak2_195_1526_0.153616512486545_10.6532926030401_2.3171913304973 chr16 43698027 43700345 + 2.3171913304973 NA Intergenic Intergenic -35002 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak1_486_5502_-0.0852762351211798_12.3833644957688_2.3170796494726 chr17 6595714 6600158 + 2.3170796494726 NA Intergenic (TTTC)n|Simple_repeat|Simple_repeat -3735 NM_001166627 100040531 Mm.457987 NM_001166627 ENSMUSG00000095677 Dynlt1f 100040631|Dynlt1e dynein light chain Tctex-type 1F protein-coding common_peak1_410_3938_0.0968583710741022_11.9920428871511_2.31610506665815 chr11 106158269 106161456 + 2.31610506665815 NA intron (NM_172397, intron 1 of 4) CpG 280 NM_172397 67803 Mm.21687 NM_172397 ENSMUSG00000040699 Limd2 0610025L06Rik|AI413966 LIM domain containing 2 protein-coding unique_peak2_13_107_-0.694935063331898_6.40741997049752_2.31575603329713 chr11 73018856 73019567 + 2.31575603329713 NA intron (NM_018883, intron 1 of 15) CpG 203 NM_018883 55984 Mm.9998 NM_018883 ENSMUSG00000020785 Camkk1 AI846603|CaMKKalpha|Camkk calcium/calmodulin-dependent protein kinase kinase 1, alpha protein-coding unique_peak2_13_107_-0.694935063331898_6.40741997049752_2.31575603329713-4 chrX 166170395 166170932 + 2.31575603329713 NA intron (NM_001310724, intron 1 of 3) intron (NM_001310724, intron 1 of 3) 209 NM_001310724 237221 Mm.209490 NM_146238 ENSMUSG00000040621 Gemin8 B130034M20Rik|B930082C09Rik|BC023488|gemin-8 gem (nuclear organelle) associated protein 8 protein-coding unique_peak2_13_107_-0.694935063331898_6.40741997049752_2.31575603329713-2 chr6 72354834 72355814 + 2.31575603329713 NA promoter-TSS (NM_144916) promoter-TSS (NM_144916) -159 NM_144916 232086 Mm.491165 NM_144916 ENSMUSG00000055912 Tmem150a BC014685|Tmem150 transmembrane protein 150A protein-coding common_peak1_13_107_-0.694935063331898_6.40741997049752_2.31575603329713 chr17 24140469 24140798 + 2.31575603329713 NA intron (NM_001286662, intron 1 of 13) ID4|SINE|ID 961 NM_011062 18607 Mm.10504 NM_011062 ENSMUSG00000024122 Pdpk1 Pdk1 3-phosphoinositide dependent protein kinase 1 protein-coding unique_peak2_13_107_-0.694935063331898_6.40741997049752_2.31575603329713-3 chr8 34163098 34163937 + 2.31575603329713 NA intron (NM_026432, intron 2 of 5) intron (NM_026432, intron 2 of 5) 3195 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak1_30_239_-0.440208390874212_7.68678640017141_2.31504912379998 chr19 29101435 29101960 + 2.31504912379998 NA intron (NM_021525, intron 1 of 8) CpG 322 NM_021525 59028 Mm.28630 NM_021525 ENSMUSG00000024785 Rcl1 2310040A02Rik|AI789745|C76567|RPCL1|Rnac RNA terminal phosphate cyclase-like 1 protein-coding unique_peak2_30_239_-0.440208390874212_7.68678640017141_2.31504912379998 chr7 34233517 34235154 + 2.31504912379998 NA Intergenic CpG -3999 NM_008155 14751 Mm.589 NM_008155 ENSMUSG00000036427 Gpi1 Amf|Gpi|Gpi-1|Gpi-1r|Gpi-1s|Gpi-1t|Gpi1-r|Gpi1-s|Gpi1-t|Gpi1s|MF|NK|NK/GPI|Nlk|Org|Pgi|Phi glucose phosphate isomerase 1 protein-coding common_peak2_26_101_0.5497822248681_6.94731645440555_2.31473948912565 chr9 45242379 45243039 + 2.31473948912565 NA intron (NM_001198971, intron 2 of 4) intron (NM_001198971, intron 2 of 4) 23998 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak2_130_902_0.198505084366015_9.91783471966387_2.31455353805776 chr12 116047129 116049363 + 2.31455353805776 NA intron (NM_001286214, intron 1 of 2) intron (NM_001286214, intron 1 of 2) 522 NM_019565 56220 Mm.254997 NM_019565 ENSMUSG00000042063 Zfp386 Kzf1|mKIAA4205 zinc finger protein 386 (Kruppel-like) protein-coding unique_peak2_15_122_-0.646261242214072_6.6193838842322_2.31409113687013 chr4 133905004 133906091 + 2.31409113687013 NA Intergenic G-rich|Low_complexity|Low_complexity -17750 NM_009097 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak2_127_875_0.201303137083062_9.8754386281427_2.31308194758411 chr5 113867329 113870197 + 2.31308194758411 NA intron (NM_011779, intron 2 of 10) intron (NM_011779, intron 2 of 10) -38262 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak1_78_460_0.273476150683978_8.98536101577133_2.31307274879281 chr4 99929129 99930415 + 2.31307274879281 NA exon (NM_028132, exon 1 of 11) exon (NM_028132, exon 1 of 11) 321 NM_028132 72157 Mm.217764 NM_028132 ENSMUSG00000025791 Pgm2 2610020G18Rik|AA407108|AI098105|Pgm-2|Pgm1 phosphoglucomutase 2 protein-coding common_peak1_33_142_0.470277235382138_7.39500995446946_2.31304930122795-2 chr9 90261712 90262291 + 2.31304930122795 NA intron (NM_194334, intron 1 of 12) ORR1D1|LTR|ERVL-MaLR 8768 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak1_33_142_0.470277235382138_7.39500995446946_2.31304930122795 chr13 49206020 49206442 + 2.31304930122795 NA intron (NM_026738, intron 2 of 5) intron (NM_026738, intron 2 of 5) 9795 NM_026738 68480 Mm.3336 NM_026738 ENSMUSG00000037960 Card19 1110007C09Rik|AI851695|Bincard caspase recruitment domain family, member 19 protein-coding common_peak2_319_2864_0.113264048731931_11.5409514480102_2.31261182986147 chr11 55030255 55034075 + 2.31261182986147 NA intron (NM_013472, intron 1 of 25) intron (NM_013472, intron 1 of 25) 1306 NM_001110211 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak2_240_2395_-0.130560697534136_11.1611318440217_2.31192973461515 chr11 90249316 90252781 + 2.31192973461515 NA intron (NM_026178, intron 1 of 6) intron (NM_026178, intron 1 of 6) 1572 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak2_154_1125_0.177796679532397_10.2258894518464_2.31186374318068 chr6 82651926 82653670 + 2.31186374318068 NA promoter-TSS (NM_025882) promoter-TSS (NM_025882) 67 NM_025882 66979 Mm.195753 NM_025882 ENSMUSG00000030042 Pole4 2400007P05Rik|5830430F06Rik polymerase (DNA-directed), epsilon 4 (p12 subunit) protein-coding common_peak1_79_673_-0.25224593117837_9.27048181559267_2.31008429869249 chr15 102231161 102232192 + 2.31008429869249 NA intron (NM_013566, intron 1 of 14) intron (NM_013566, intron 1 of 14) 259 NM_013566 16421 Mm.58 NM_013566 ENSMUSG00000001281 Itgb7 Ly69 integrin beta 7 protein-coding common_peak1_291_3001_-0.116164612862349_11.4936259551895_2.30939771570978 chr13 108296680 108298777 + 2.30939771570978 NA Intergenic Intergenic -18609 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak1_133_1210_-0.18482713835825_10.1495695805152_2.30921323486887 chr17 47501316 47502683 + 2.30921323486887 NA intron (NM_022015, intron 1 of 8) intron (NM_022015, intron 1 of 8) 288 NM_022015 63856 Mm.275901 NM_022015 ENSMUSG00000023980 Taf8 AW260255|Tbn TATA-box binding protein associated factor 8 protein-coding common_peak2_109_965_-0.207976049263502_9.81189135420402_2.3091607142919 chr11 87986163 87988437 + 2.3091607142919 NA promoter-TSS (NM_001168472) promoter-TSS (NM_001168472) 233 NM_026556 68097 Mm.246436 NM_026556 ENSMUSG00000020483 Dynll2 1700064A15Rik|6720463E02Rik|C87222|DLC8|DLC8b|Dlc2 dynein light chain LC8-type 2 protein-coding common_peak2_181_1725_-0.154259395272552_10.6760870515427_2.30879692326057 chr16 52092641 52096446 + 2.30879692326057 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 62994 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak2_223_2198_-0.136230205277975_11.034516786216_2.30873696133431 chr6 86665421 86671048 + 2.30873696133431 NA intron (NM_010751, intron 2 of 5) intron (NM_010751, intron 2 of 5) 925 NM_010751 17119 Mm.279580 NM_010751 ENSMUSG00000001156 Mxd1 AW122478|Mad|Mad1 MAX dimerization protein 1 protein-coding common_peak1_74_626_-0.262171924512373_9.16123567054585_2.30869791805197 chr5 124578674 124579706 + 2.30869791805197 NA promoter-TSS (NM_145371) promoter-TSS (NM_145371) 42 NM_181410 209357 Mm.185467 NM_181410 ENSMUSG00000029387 Gtf2h3 34kDa|5033417D07Rik|BTF2|BTF2 p34|C730029A10|D5Ertd679e|TFIIH general transcription factor IIH, polypeptide 3 protein-coding unique_peak2_53_434_-0.31605171271014_8.60684573438102_2.30867352637517 chr3 145933390 145935070 + 2.30867352637517 NA 3' UTR (NM_009740, exon 3 of 3) 3' UTR (NM_009740, exon 3 of 3) -3802 NM_025555 66421 Mm.25137 NM_025555 ENSMUSG00000036873 2410004B18Rik 4930572C24Rik RIKEN cDNA 2410004B18 gene protein-coding common_peak1_34_148_0.462277194061373_7.45030711749285_2.30842285803124 chr5 103760343 103761081 + 2.30842285803124 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 6139 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_51_260_0.354127559257403_8.20496977619859_2.30808948871506 chr15 64071173 64072713 + 2.30808948871506 NA Intergenic Intergenic -11495 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_491_4946_0.0864642194327985_12.315570293875_2.30799166082994 chr18 67723095 67729706 + 2.30799166082994 NA Intergenic Intergenic -1779 NM_008977 19255 Mm.260433 NM_008977 ENSMUSG00000024539 Ptpn2 AI325124|Ptpt|TC-PTP protein tyrosine phosphatase, non-receptor type 2 protein-coding common_peak1_149_1378_-0.172644722037957_10.343084380495_2.30797142526527 chr13 43238540 43240791 + 2.30797142526527 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) 64507 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak1_31_247_-0.431330736075351_7.7385309423492_2.30788157645687 chr10 4431942 4432346 + 2.30788157645687 NA promoter-TSS (NM_024261) promoter-TSS (NM_024261) 208 NM_025343 66084 Mm.153111 NM_025343 ENSMUSG00000019763 Rmnd1 0610042C05Rik|AA408137|AI462664|AW536662 required for meiotic nuclear division 1 homolog protein-coding common_peak1_21_167_-0.53251968008481_7.12605758273636_2.30773494716548 chr15 76697476 76697905 + 2.30773494716548 NA intron (NM_182805, intron 4 of 10) intron (NM_182805, intron 4 of 10) 926 NM_182805 76282 Mm.30130 NM_182805 ENSMUSG00000022546 Gpt 1300007J06Rik|2310022B03Rik|ALT|ALT1|Gpt-1|Gpt1 glutamic pyruvic transaminase, soluble protein-coding common_peak1_21_167_-0.53251968008481_7.12605758273636_2.30773494716548-3 chr2 25157112 25157675 + 2.30773494716548 NA Intergenic Intergenic -23365 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak1_21_167_-0.53251968008481_7.12605758273636_2.30773494716548-2 chr16 35770084 35770602 + 2.30773494716548 NA promoter-TSS (NM_175111) promoter-TSS (NM_175111) -43 NM_175111 66667 Mm.45272 NM_175111 ENSMUSG00000022849 Hspbap1 3830421G21Rik Hspb associated protein 1 protein-coding common_peak1_269_2305_0.1257486672525_11.234051131278_2.30698335125545 chr4 137992930 137995715 + 2.30698335125545 NA intron (NM_172703, intron 2 of 34) CpG-10542 866 NM_172703 230861 Mm.268903 NM_172703 ENSMUSG00000028760 Eif4g3 1500002J22Rik|4930523M17Rik|G1-419-52|eIF4GII|repro8 eukaryotic translation initiation factor 4 gamma, 3 protein-coding common_peak1_127_1148_-0.190072885961877_10.0711266396652_2.30575845366364 chr14 61736097 61737792 + 2.30575845366364 NA Intergenic Intergenic -54571 NR_028264 668253 Mm.32886 NR_028264 ENSMUSG00000097589 Dleu2 1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2 deleted in lymphocytic leukemia, 2 ncRNA common_peak2_292_2559_0.119665568305487_11.3817608790401_2.30570592536672 chr15 12116748 12119454 + 2.30570592536672 NA intron (NM_011767, intron 1 of 19) CpG 250 NM_011767 22763 Mm.273496 NM_011767 ENSMUSG00000022201 Zfr C920030H05Rik zinc finger RNA binding protein protein-coding common_peak1_60_324_0.320223543131156_8.50440767948139_2.30539188172038 chr10 44380128 44381145 + 2.30539188172038 NA Intergenic Intergenic 20960 NR_035450 100316688 NR_035450 ENSMUSG00000089260 Mir1929 mir-1929|mmu-mir-1929 microRNA 1929 ncRNA common_peak2_35_154_0.455173267784786_7.50371103916663_2.30532468003755 chr5 114100073 114100923 + 2.30532468003755 NA exon (NM_001033202, exon 1 of 13) exon (NM_001033202, exon 1 of 13) 165 NM_001033202 100756 Mm.240421 NM_001033202 ENSMUSG00000029592 Usp30 6330590F17Rik|AI851327|D5Ertd483e ubiquitin specific peptidase 30 protein-coding common_peak1_35_154_0.455173267784786_7.50371103916663_2.30532468003755 chr2 91956809 91957511 + 2.30532468003755 NA intron (NM_138306, intron 1 of 30) intron (NM_138306, intron 1 of 30) 6403 NM_138306 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak1_86_524_0.256624218112368_9.16448572160967_2.30519998734791 chr9 42123388 42124420 + 2.30519998734791 NA exon (NM_011436, exon 1 of 48) exon (NM_011436, exon 1 of 48) 385 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak2_86_524_0.256624218112368_9.16448572160967_2.30519998734791 chr16 20140307 20141917 + 2.30519998734791 NA promoter-TSS (NM_001033237) promoter-TSS (NM_001033237) 49 NM_001145930 208146 Mm.390895 NM_001033237 ENSMUSG00000041215 Yeats2 BC042768|mKIAA1197 YEATS domain containing 2 protein-coding common_peak2_94_590_0.24145547009768_9.32774205522637_2.30491665309581 chr14 121034947 121037145 + 2.30491665309581 NA intron (NM_134082, intron 1 of 26) CpG 472 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding common_peak2_101_648_0.232208420314674_9.45817887815648_2.30466700271178 chr11 96313924 96315881 + 2.30466700271178 NA Intergenic CpG -2263 NR_029784 723893 NR_029784 ENSMUSG00000065519 Mir10a Mirn10a|miR-10a|mmu-mir-10a microRNA 10a ncRNA common_peak2_118_1056_-0.198687291143038_9.94641601581116_2.30436321839287 chr10 59979575 59982175 + 2.30436321839287 NA Intergenic Intergenic -21930 NM_026937 69090 Mm.155839 NM_026937 ENSMUSG00000044475 Ascc1 1810015P09Rik|AI550520|ASC1p50|CGI-18 activating signal cointegrator 1 complex subunit 1 protein-coding unique_peak2_18_144_-0.579544886618044_6.89013664670591_2.30420877568188-2 chrX 167032746 167033475 + 2.30420877568188 NA Intergenic Intergenic 37260 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak1_18_144_-0.579544886618044_6.89013664670591_2.30420877568188 chr4 84008178 84008627 + 2.30420877568188 NA Intergenic Intergenic 36477 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA unique_peak2_18_144_-0.579544886618044_6.89013664670591_2.30420877568188 chr7 125560006 125561384 + 2.30420877568188 NA intron (NM_001008700, intron 1 of 10) PB1D9|SINE|Alu 8413 NM_001008700 16190 Mm.233802 NM_010557 ENSMUSG00000030748 Il4ra CD124|Il4r interleukin 4 receptor, alpha protein-coding common_peak1_18_144_-0.579544886618044_6.89013664670591_2.30420877568188-2 chr9 63732199 63732591 + 2.30420877568188 NA intron (NM_016769, intron 1 of 8) LTR33A_|LTR|ERVL 25599 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_379_3565_0.101603425022928_11.8508927001365_2.30283802212055 chr3 69125163 69128555 + 2.30283802212055 NA 5' UTR (NM_008467, exon 1 of 17) 5' UTR (NM_008467, exon 1 of 17) 233 NM_008467 16649 Mm.30601 NM_008467 ENSMUSG00000027782 Kpna4 1110058D08Rik|IPOA3 karyopherin (importin) alpha 4 protein-coding common_peak2_140_994_0.188712888148292_10.0529091595052_2.30251565728957 chr17 33523234 33525522 + 2.30251565728957 NA intron (NR_037707, intron 1 of 24) intron (NR_037707, intron 1 of 24) 182 NR_037708 224697 Mm.29304 NM_172619 ENSMUSG00000024299 Adamts10 9430006O18|AW045948|Adam-ts10|Adamts-10|Znmp a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10 protein-coding common_peak1_32_255_-0.42268005233912_7.78865997383044_2.30218023115878 chr9 106170259 106170838 + 2.30218023115878 NA promoter-TSS (NM_029896) promoter-TSS (NM_029896) -381 NM_029896 77305 Mm.265125 NM_029896 ENSMUSG00000020257 Wdr82 9430077D24Rik|CDW5/WDR82 WD repeat domain containing 82 protein-coding common_peak1_61_506_-0.292547421082679_8.839568226462_2.3021275936061 chr10 34171122 34172384 + 2.3021275936061 NA intron (NM_172508, intron 2 of 5) intron (NM_172508, intron 2 of 5) 35798 NM_172508 212898 Mm.34557 NM_172508 ENSMUSG00000039497 Dse 6030499O08|AI480506|B130024B19Rik|DS-epi1|Sart2 dermatan sulfate epimerase protein-coding common_peak1_66_368_0.303066694089328_8.67901035310506_2.30183479826305 chr12 73632785 73633855 + 2.30183479826305 NA intron (NM_001313977, intron 2 of 14) intron (NM_001313977, intron 2 of 14) 48524 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak2_66_368_0.303066694089328_8.67901035310506_2.30183479826305 chr4 140813929 140815127 + 2.30183479826305 NA 3' UTR (NM_011059, exon 16 of 16) 3' UTR (NM_011059, exon 16 of 16) 3535 NR_045944 100049161 Mm.20854 NR_045944 ENSMUSG00000085918 Gm13032 OTTMUSG00000010086 predicted gene 13032 ncRNA common_peak2_175_1327_0.164595244906094_10.4573370538_2.30165035871582 chr1 134360989 134362683 + 2.30165035871582 NA exon (NM_001042485, exon 1 of 8) exon (NM_001042485, exon 1 of 8) 163 NM_001042485 57439 Mm.393140 NM_020588 ENSMUSG00000042305 Tmem183a 1300007B12Rik|1700020N19Rik|Tmem183 transmembrane protein 183A protein-coding common_peak1_25_199_-0.488434945133792_7.39963871720783_2.30117580458282-2 chr17 80631945 80632499 + 2.30117580458282 NA intron (NM_001290345, intron 13 of 33) ORR1C2|LTR|ERVL-MaLR -68388 NM_001033443 381113 Mm.329216 NM_001033443 ENSMUSG00000033966 Cdkl4 AU067824|Gm942 cyclin-dependent kinase-like 4 protein-coding common_peak1_25_199_-0.488434945133792_7.39963871720783_2.30117580458282 chr14 16255723 16256353 + 2.30117580458282 NA intron (NM_021504, intron 2 of 11) intron (NM_021504, intron 2 of 11) -6230 NM_027695 71147 Mm.197960 NM_027695 ENSMUSG00000021786 Oxsm 4933425A18Rik|C80494 3-oxoacyl-ACP synthase, mitochondrial protein-coding common_peak2_47_232_0.376201634624172_8.05228696196637_2.29932569472887 chr4 149436110 149437674 + 2.29932569472887 NA Intergenic MMVL30-int|LTR|ERV1 -10261 NM_022022 63958 Mm.415260 NM_022022 ENSMUSG00000028960 Ube4b 4930551I19Rik|4933406G05Rik|AU014668|D4Bwg0973e|UFD2|UFD2a|Ufd2p|mKIAA0684 ubiquitination factor E4B protein-coding common_peak1_427_4717_-0.0917646615109788_12.158077372484_2.2985306096508 chr19 46500058 46504381 + 2.2985306096508 NA 5' UTR (NM_053100, exon 1 of 6) 5' UTR (NM_053100, exon 1 of 6) 571 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_272_2338_0.124803412520903_11.2540778526129_2.29827378433191 chr19 59344072 59346638 + 2.29827378433191 NA exon (NM_001033222, exon 1 of 5) exon (NM_001033222, exon 1 of 5) 425 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding unique_peak1_12_32_0.884414814096123_5.48660152640652_2.29782461879203 chr4 155235665 155235965 + 2.29782461879203 NA Intergenic Intergenic -13280 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_19_64_0.668766414602322_6.35675102032962_2.29714106950392-3 chr7 80299123 80299621 + 2.29714106950392 NA intron (NM_001285997, intron 1 of 13) B1_Mus1|SINE|Alu 4921 NM_001285998 233406 Mm.227274 NM_145150 ENSMUSG00000038943 Prc1 D7Ertd348e protein regulator of cytokinesis 1 protein-coding common_peak1_19_64_0.668766414602322_6.35675102032962_2.29714106950392 chr13 36807244 36807768 + 2.29714106950392 NA Intergenic Intergenic -73029 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak1_19_64_0.668766414602322_6.35675102032962_2.29714106950392-2 chr2 156762694 156763165 + 2.29714106950392 NA 3' UTR (NM_146128, exon 13 of 13) 3' UTR (NM_146128, exon 13 of 13) -12535 NM_172118 98932 Mm.271770 NM_172118 ENSMUSG00000067818 Myl9 AI327049|MLC20|Mylc2c|RLC-C myosin, light polypeptide 9, regulatory protein-coding common_peak2_51_417_-0.325325576253595_8.54469634395409_2.29701888830278 chr11 64978297 64979727 + 2.29701888830278 NA promoter-TSS (NM_023479) promoter-TSS (NM_023479) -23 NM_023479 68626 Mm.157711 NM_023479 ENSMUSG00000020549 Elac2 1110017O07Rik|D11Wsu80e|Hpc2 elaC ribonuclease Z 2 protein-coding common_peak1_51_417_-0.325325576253595_8.54469634395409_2.29701888830278 chr14 52279667 52280313 + 2.29701888830278 NA promoter-TSS (NM_172601) promoter-TSS (NM_172601) -595 NM_172601 76338 Mm.32870 NM_172601 ENSMUSG00000022159 Rab2b 1500012D09Rik|4930528G15Rik|A230002G14|D530043M21Rik RAB2B, member RAS oncogene family protein-coding common_peak2_134_939_0.193796207152916_9.97341505014146_2.29676650905142 chr10 83329260 83331634 + 2.29676650905142 NA intron (NM_177388, intron 1 of 10) B1F2|SINE|Alu 7370 NM_177388 338365 Mm.67073 NM_177388 ENSMUSG00000034591 Slc41a2 A230035L05Rik|SLC41A1-L1 solute carrier family 41, member 2 protein-coding common_peak2_60_497_-0.295482481021109_8.81226069155753_2.29577237995033 chr4 43655684 43657201 + 2.29577237995033 NA promoter-TSS (NM_026871) promoter-TSS (NM_026871) 3 NM_026871 68917 Mm.25285 NM_026871 ENSMUSG00000028470 Hint2 1190005L05Rik histidine triad nucleotide binding protein 2 protein-coding common_peak1_16_50_0.731110919002677_6.03798080147283_2.29412956599144 chr3 129830238 129830604 + 2.29412956599144 NA intron (NM_026578, intron 2 of 6) intron (NM_026578, intron 2 of 6) 975 NM_026578 68147 Mm.24873 NM_026578 ENSMUSG00000028010 Gar1 AA409823|AI326794|C430047J18Rik|Nola1 GAR1 ribonucleoprotein protein-coding unique_peak1_16_50_0.731110919002677_6.03798080147283_2.29412956599144 chr7 58686372 58686803 + 2.29412956599144 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 28385 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak2_10_85_-0.793079323194502_6.02972509310485_2.29412956599143-2 chr19 58142840 58143521 + 2.29412956599143 NA Intergenic Intergenic 92013 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA unique_peak2_10_85_-0.793079323194502_6.02972509310485_2.29412956599143-3 chr4 33315556 33316384 + 2.29412956599143 NA intron (NM_011884, intron 1 of 15) intron (NM_011884, intron 1 of 15) 5659 NM_001305273 24018 Mm.240024 NM_011884 ENSMUSG00000028274 Rngtt AU020997|HCE|MCE1 RNA guanylyltransferase and 5'-phosphatase protein-coding unique_peak2_10_85_-0.793079323194502_6.02972509310485_2.29412956599143 chr13 101668578 101669372 + 2.29412956599143 NA Intergenic L1M2|LINE|L1 23655 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_22_80_0.598610801208886_6.63915540348907_2.29395108547133-3 chr2 22798845 22799331 + 2.29395108547133 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 24761 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak1_22_80_0.598610801208886_6.63915540348907_2.29395108547133 chr1 161072010 161072517 + 2.29395108547133 NA intron (NR_131030, intron 1 of 4) intron (NR_131030, intron 1 of 4) 1496 NR_131028 70454 Mm.248212 NM_027429 ENSMUSG00000026708 Cenpl 2610300B10Rik|AW121806|AW550697|CENP-L centromere protein L protein-coding common_peak1_22_80_0.598610801208886_6.63915540348907_2.29395108547133-2 chr17 6593621 6594106 + 2.29395108547133 NA Intergenic MTE2a|LTR|ERVL-MaLR -7808 NM_001166627 100040531 Mm.457987 NM_001166627 ENSMUSG00000095677 Dynlt1f 100040631|Dynlt1e dynein light chain Tctex-type 1F protein-coding common_peak2_38_173_0.429999953759133_7.65794347272829_2.29380015149501-2 chr4 137890844 137891955 + 2.29380015149501 NA intron (NM_199307, intron 1 of 19) intron (NM_199307, intron 1 of 19) 29162 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding common_peak2_38_173_0.429999953759133_7.65794347272829_2.29380015149501 chr2 74578148 74579063 + 2.29380015149501 NA intron (NM_027133, intron 1 of 12) CpG 343 NM_001110209 69605 Mm.156113 NM_027133 ENSMUSG00000009207 Lnpk 2310011O18Rik|4921514L11Rik|9530051D01Rik|AI666268|Lnp|Lnpk1|Ul|ulnaless lunapark, ER junction formation factor protein-coding common_peak2_89_549_0.249503140338966_9.2280393785815_2.29362959677157 chr8 54465323 54468399 + 2.29362959677157 NA Intergenic CT-rich|Low_complexity|Low_complexity 63137 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak2_77_654_-0.255795335630594_9.22745342860951_2.29362959677138 chr3 79627863 79629715 + 2.29362959677138 NA promoter-TSS (NM_025794) promoter-TSS (NM_025794) -22 NM_025794 66841 Mm.28336 NM_025794 ENSMUSG00000027809 Etfdh 0610010I20Rik|AV001013 electron transferring flavoprotein, dehydrogenase protein-coding common_peak2_321_3367_-0.109067198521057_11.6631428238059_2.29349925010579 chr19 37433739 37437863 + 2.29349925010579 NA intron (NM_008245, intron 1 of 3) intron (NM_008245, intron 1 of 3) 960 NM_008245 15242 Mm.33896 NM_008245 ENSMUSG00000024986 Hhex Hex|Hex1|Hhex-rs2|Prh|Prhx hematopoietically expressed homeobox protein-coding common_peak2_221_1793_0.141566303631791_10.8797473267352_2.2934672653777 chr17 83349764 83352455 + 2.2934672653777 NA 5' UTR (NM_001114361, exon 1 of 24) 5' UTR (NM_001114361, exon 1 of 24) 178 NM_001114362 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding common_peak1_66_551_-0.277980756628445_8.96953407846395_2.29335347572081 chr1 180767863 180768853 + 2.29335347572081 NA Intergenic Intergenic 42315 NM_133225 170760 Mm.272981 NM_133225 ENSMUSG00000026499 Acbd3 60kDa|8430407O11Rik|D1Ertd10e|GCP60|GOLPH1|Gocap1|Pap7 acyl-Coenzyme A binding domain containing 3 protein-coding common_peak2_36_161_0.439933648326786_7.55981682704802_2.29299843324306 chr4 89137208 89138146 + 2.29299843324306 NA intron (NM_024433, intron 1 of 7) CpG 307 NM_024433 66902 Mm.28500 NM_024433 ENSMUSG00000062937 Mtap 1300019I21Rik|MSAP methylthioadenosine phosphorylase protein-coding common_peak2_44_212_0.391469017338793_7.93044412889524_2.29252046453013 chr17 34293064 34294712 + 2.29252046453013 NA Intergenic Intergenic -6117 NM_010378 14960 Mm.235338 NM_010378 ENSMUSG00000036594 H2-Aa Aalpha|H-2Aa|H2Aa|I-Aalpha|IAalpha|Ia-1|Ia1 histocompatibility 2, class II antigen A, alpha protein-coding common_peak2_35_279_-0.397985343885944_7.930290345002_2.29252046453013 chr17 44075479 44076380 + 2.29252046453013 NA Intergenic RMER15|LTR|ERVL -2917 NM_032003 83965 Mm.30145 NM_032003 ENSMUSG00000023960 Enpp5 AW061004|D17Abb1e|E-NPP 5 ectonucleotide pyrophosphatase/phosphodiesterase 5 protein-coding common_peak2_44_212_0.391469017338793_7.93044412889524_2.29252046453013-2 chr2 173448106 173449534 + 2.29252046453013 NA Intergenic ORR1D1-int|LTR|ERVL-MaLR -73772 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding common_peak1_49_399_-0.331228686451984_8.47824184654873_2.292311806988 chr11 4160175 4160871 + 2.292311806988 NA promoter-TSS (NM_177616) promoter-TSS (NM_177616) 169 NM_026175 67465 Mm.156914 NM_026175 ENSMUSG00000002129 Sf3a1 1200014H24Rik|5930416L09Rik|AI159724 splicing factor 3a, subunit 1 protein-coding common_peak2_139_985_0.189226500518334_10.0400570866371_2.29180504651124 chr17 24527268 24529398 + 2.29180504651124 NA promoter-TSS (NM_001172114) promoter-TSS (NM_001172114) 82 NR_045289 75614 Mm.440235 NR_045289 ENSMUSG00000093565 Rab26os 2610019E17Rik RAB26, member RAS oncogene family, opposite strand ncRNA common_peak1_134_1220_-0.183534331269488_10.1620803193527_2.29168927901233 chr8 35494658 35496248 + 2.29168927901233 NA promoter-TSS (NM_026067) promoter-TSS (NM_026067) 80 NM_026067 67276 Mm.207534 NM_026067 ENSMUSG00000031527 Eri1 3'hexo|3110010F15Rik|Thex1|eri-1 exoribonuclease 1 protein-coding common_peak2_81_691_-0.246572651384943_9.31134190194425_2.29149136050402 chr8 83972076 83973701 + 2.29149136050402 NA promoter-TSS (NM_008854) promoter-TSS (NM_008854) -90 NM_008854 18747 Mm.19111 NM_008854 ENSMUSG00000005469 Prkaca PKCD|Pkaca protein kinase, cAMP dependent, catalytic, alpha protein-coding common_peak2_45_219_0.383713401755205_7.97321641440226_2.29141179334196 chr11 6391020 6392464 + 2.29141179334196 NA Intergenic Intergenic -3383 NM_001005867 52915 Mm.1144 NM_028601 ENSMUSG00000041164 Zmiz2 Zimp7 zinc finger, MIZ-type containing 2 protein-coding unique_peak2_45_219_0.383713401755205_7.97321641440226_2.29141179334196 chr4 144908088 144909694 + 2.29141179334196 NA intron (NM_011303, intron 1 of 5) intron (NM_011303, intron 1 of 5) 15754 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_46_226_0.376582600135102_8.01483978735847_2.29120585841679 chr7 25619426 25620055 + 2.29120585841679 NA 5' UTR (NM_025504, exon 1 of 6) 5' UTR (NM_025504, exon 1 of 6) 247 NM_025504 66349 Mm.159956 NM_025504 ENSMUSG00000057229 Atp5sl 2310004L02Rik|C030044E10Rik ATP5S-like protein-coding common_peak1_206_2003_-0.14193695679513_10.8976983147976_2.29015258382059 chr6 42342818 42345171 + 2.29015258382059 NA Intergenic Intergenic -5834 NM_011777 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak1_47_381_-0.337041048757296_8.4089083036571_2.28968892514663 chr5 134639661 134640281 + 2.28968892514663 NA promoter-TSS (NM_033561) promoter-TSS (NM_033561) -562 NM_033561 22384 Mm.27955 NM_033561 ENSMUSG00000040731 Eif4h AU018978|D5Ertd355e|E430026L18Rik|Ef4h|Wbscr1|Wscr1|eIF-4H eukaryotic translation initiation factor 4H protein-coding common_peak2_199_1567_0.151142281580245_10.6902809849053_2.28935672094446 chr11 62647311 62650041 + 2.28935672094446 NA promoter-TSS (NM_198861) promoter-TSS (NM_198861) 12 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding common_peak1_40_186_0.414548805177789_7.75416886247653_2.2892963855993 chr1 42851073 42851800 + 2.2892963855993 NA intron (NM_023514, intron 1 of 10) CpG 203 NM_023514 69527 Mm.252982 NM_023514 ENSMUSG00000060679 Mrps9 2310002A08Rik|AW322516|Mrp-S9|S9mt|mg637 mitochondrial ribosomal protein S9 protein-coding common_peak1_40_186_0.414548805177789_7.75416886247653_2.2892963855993-2 chr14 64639375 64640101 + 2.2892963855993 NA Intergenic Intergenic -12793 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak1_40_186_0.414548805177789_7.75416886247653_2.2892963855993-3 chr5 73208800 73209628 + 2.2892963855993 NA intron (NM_028194, intron 2 of 62) intron (NM_028194, intron 2 of 62) 47404 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak2_147_1356_-0.17319673183473_10.3196066395015_2.28861600841366 chr17 66100583 66102538 + 2.28861600841366 NA promoter-TSS (NM_028388) promoter-TSS (NM_028388) -1 NM_028388 72900 Mm.2206 NM_028388 ENSMUSG00000024099 Ndufv2 2900010C23Rik NADH dehydrogenase (ubiquinone) flavoprotein 2 protein-coding common_peak2_322_2900_0.111761865793321_11.5582155130947_2.28860062710339 chr11 20631065 20633735 + 2.28860062710339 NA intron (NM_001038625, intron 1 of 1) CpG 423 NM_001038625 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding common_peak2_110_975_-0.206819170198191_9.82732775246379_2.2870682443112 chr1 182362042 182364881 + 2.2870682443112 NA Intergenic Intergenic -21855 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak2_38_304_-0.379721982842388_8.06280444102905_2.28438340540323-2 chr14 118132081 118133261 + 2.28438340540323 NA promoter-TSS (NM_029578) promoter-TSS (NM_029578) 94 NM_029578 76355 Mm.251537 NM_029578 ENSMUSG00000022130 Tgds 2610017J16Rik|2610025M23Rik|AI648925 TDP-glucose 4,6-dehydratase protein-coding common_peak2_38_304_-0.379721982842388_8.06280444102905_2.28438340540323 chr10 88503141 88504073 + 2.28438340540323 NA exon (NM_144807, exon 1 of 8) exon (NM_144807, exon 1 of 8) 363 NR_027477 212862 Mm.288897 NM_144807 ENSMUSG00000060002 Chpt1 - choline phosphotransferase 1 protein-coding common_peak1_41_193_0.404174112797727_7.80199989858599_2.28427018019386 chr5 148341811 148342532 + 2.28427018019386 NA intron (NM_001301424, intron 6 of 12) intron (NM_001301424, intron 6 of 12) 50644 NM_001301424 11987 Mm.275489 NM_007513 ENSMUSG00000041313 Slc7a1 4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein-coding common_peak1_41_193_0.404174112797727_7.80199989858599_2.28427018019386-2 chr9 120030305 120031217 + 2.28427018019386 NA Intergenic B3|SINE|B2 -7163 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak1_119_1066_-0.197463405854009_9.96061275789742_2.28426898360178 chr9 4309760 4310876 + 2.28426898360178 NA promoter-TSS (NM_026276) promoter-TSS (NM_026276) 502 NM_026962 69149 Mm.25946 NM_026962 ENSMUSG00000025893 Kbtbd3 2200003A07Rik|Bklhd3 kelch repeat and BTB (POZ) domain containing 3 protein-coding common_peak1_44_355_-0.349554793401767_8.30095603426551_2.2840957975017-2 chr4 152296555 152297171 + 2.2840957975017 NA promoter-TSS (NM_133788) promoter-TSS (NM_133788) -351 NR_037908 57295 Mm.277464 NM_133788 ENSMUSG00000039662 Icmt 1700008E11Rik|C80758|Gm13095|HSTE14|OTTMUSG00000010406|PPMT|STE14|pcCMT isoprenylcysteine carboxyl methyltransferase protein-coding common_peak1_44_355_-0.349554793401767_8.30095603426551_2.2840957975017 chr16 58497756 58498487 + 2.2840957975017 NA intron (NM_018784, intron 2 of 10) intron (NM_018784, intron 2 of 10) 25191 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding common_peak2_136_1241_-0.182111901685623_10.1873935073777_2.28379060783251 chr11 94385359 94387443 + 2.28379060783251 NA intron (NM_029600, intron 1 of 30) intron (NM_029600, intron 1 of 30) 6575 NM_029600 76408 Mm.23942 NM_029600 ENSMUSG00000020865 Abcc3 1700019L09Rik|ABC31|MLP2|MOAT-D|MRP3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 protein-coding common_peak1_37_296_-0.38734260621752_8.02064781769201_2.28355050662638 chr15 58415410 58416120 + 2.28355050662638 NA exon (NM_145959, exon 1 of 24) exon (NM_145959, exon 1 of 24) 297 NM_145959 210998 Mm.3224 NM_145959 ENSMUSG00000037119 Fam91a1 AV220772|BC033609|D15Ertd621e|SKIN|mKIAA0493 family with sequence similarity 91, member A1 protein-coding unique_peak2_27_214_-0.461628099571535_7.51737879980369_2.28347532657176 chr15 102331408 102332377 + 2.28347532657176 NA TTS (NM_027044) TTS (NM_027044) 183 NM_021713 60315 Mm.251638 NM_021713 ENSMUSG00000001285 Myg1 0610023A07Rik|2810433J21Rik|5830429P19Rik|AI325965|Gamm1 melanocyte proliferating gene 1 protein-coding common_peak1_27_214_-0.461628099571535_7.51737879980369_2.28347532657176-2 chr4 11769430 11769999 + 2.28347532657176 NA intron (NM_019753, intron 2 of 17) intron (NM_019753, intron 2 of 17) 11557 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding unique_peak2_27_214_-0.461628099571535_7.51737879980369_2.28347532657176-2 chr19 17319287 17320678 + 2.28347532657176 NA Intergenic ORR1E|LTR|ERVL-MaLR 19523 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_27_214_-0.461628099571535_7.51737879980369_2.28347532657176 chr1 13640027 13640555 + 2.28347532657176 NA intron (NM_145381, intron 3 of 6) HAL1|LINE|L1 20218 NM_145381 212442 Mm.89572 NM_145381 ENSMUSG00000025937 Lactb2 Cgi-83|E430032H21Rik lactamase, beta 2 protein-coding common_peak1_45_364_-0.346679538487514_8.33841288452362_2.28334162593501 chr1 66700798 66701548 + 2.28334162593501 NA intron (NM_025683, intron 1 of 5) CpG 342 NM_001310644 66646 Mm.240912 NM_025683 ENSMUSG00000026005 Rpe 2810429B02Rik|5730518J08Rik ribulose-5-phosphate-3-epimerase protein-coding common_peak2_46_373_-0.34376337246162_8.37501277365683_2.28327914373775 chr5 110285634 110287056 + 2.28327914373775 NA promoter-TSS (NM_008993) promoter-TSS (NM_008993) 26 NM_011132 18973 Mm.35061 NM_011132 ENSMUSG00000007080 Pole - polymerase (DNA directed), epsilon protein-coding common_peak2_220_1783_0.1416412761287_10.8717205379847_2.28313616314977 chr7 4500334 4502473 + 2.28313616314977 NA exon (NM_029834, exon 1 of 22) exon (NM_029834, exon 1 of 22) 277 NM_029834 232807 Mm.360391 NM_029834 ENSMUSG00000019254 Ppp1r12c 2410197A17Rik|AI839747|B430101M08|Mbs85 protein phosphatase 1, regulatory (inhibitor) subunit 12C protein-coding unique_peak2_57_469_-0.301241320866074_8.72589628613196_2.282918418684 chr10 67657032 67658902 + 2.282918418684 NA Intergenic Intergenic -109012 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding unique_peak2_19_151_-0.556793285812809_6.96953087053718_2.28263805875227 chr11 106716072 106717387 + 2.28263805875227 NA Intergenic Intergenic -1448 NM_001305157 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak1_19_151_-0.556793285812809_6.96953087053718_2.28263805875227 chr1 86210107 86210486 + 2.28263805875227 NA intron (NM_001310702, intron 18 of 24) MLTR25C|LTR|ERVK 55516 NM_001310702 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding common_peak1_19_151_-0.556793285812809_6.96953087053718_2.28263805875227-2 chr9 107887592 107887997 + 2.28263805875227 NA promoter-TSS (NM_028369) promoter-TSS (NM_028369) -335 NM_028369 72825 Mm.38037 NM_028369 ENSMUSG00000032583 Mon1a 2810468K17Rik MON1 homolog A, secretory traffciking associated protein-coding unique_peak2_22_175_-0.520970814543787_7.1989462113654_2.28150923595375-3 chr5 113870290 113871521 + 2.28150923595375 NA intron (NM_011779, intron 2 of 10) intron (NM_011779, intron 2 of 10) 37801 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding unique_peak2_22_175_-0.520970814543787_7.1989462113654_2.28150923595375 chr17 15439707 15440981 + 2.28150923595375 NA Intergenic Intergenic 44098 NM_024203 67544 Mm.35039 NM_024203 ENSMUSG00000014763 Fam120b 4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838 family with sequence similarity 120, member B protein-coding unique_peak2_22_175_-0.520970814543787_7.1989462113654_2.28150923595375-2 chr2 59160698 59161834 + 2.28150923595375 NA intron (NM_026361, intron 1 of 21) CpG 416 NM_175464 227937 Mm.260938 NM_026361 ENSMUSG00000026991 Pkp4 5031422I09Rik|9430019K17Rik|Armrp|p0071 plakophilin 4 protein-coding common_peak1_22_175_-0.520970814543787_7.1989462113654_2.28150923595375 chr11 98788455 98789007 + 2.28150923595375 NA Intergenic Intergenic -7038 NM_028722 74026 Mm.258352 NM_028722 ENSMUSG00000052915 Msl1 2810017F12Rik|4121402D02Rik|4930463F05Rik|AA682082|Msl-1 male-specific lethal 1 homolog (Drosophila) protein-coding common_peak1_42_338_-0.359414292882393_8.22543431669515_2.28128103565308 chr7 46830556 46831450 + 2.28128103565308 NA Intergenic Intergenic -14801 NM_010699 16828 Mm.29324 NM_010699 ENSMUSG00000063229 Ldha Ldh1|Ldhm|l7R2 lactate dehydrogenase A protein-coding common_peak2_42_338_-0.359414292882393_8.22543431669515_2.28128103565308 chr13 67499842 67500932 + 2.28128103565308 NA 5' UTR (NM_001007575, exon 1 of 4) 5' UTR (NM_001007575, exon 1 of 4) 135 NM_001007575 238693 Mm.478914 NM_001007575 ENSMUSG00000071291 Zfp58 A530094I17Rik|Mfg-1|Mfg1|Rslcan5|Zfp817 zinc finger protein 58 protein-coding common_peak1_40_321_-0.369473613049192_8.14618007159002_2.28121261961541 chrX 136740678 136741353 + 2.28121261961541 NA 5' UTR (NM_001168225, exon 1 of 4) 5' UTR (NM_001168225, exon 1 of 4) 140 NM_001168225 56397 Mm.27218 NM_019768 ENSMUSG00000031422 Morf4l2 2410017O14Rik|Mrgx|Sid393p|mKIAA0026 mortality factor 4 like 2 protein-coding common_peak1_75_634_-0.257023955889926_9.18210080371457_2.28105208870704 chr17 25015177 25015837 + 2.28105208870704 NA promoter-TSS (NM_020608) promoter-TSS (NM_020608) -277 NM_020608 57354 Mm.328854 NM_020608 ENSMUSG00000038002 Cramp1l 5830477H08Rik|AI256853|AI790734|Cramp1|Tce4|mKIAA1426 Crm, cramped-like (Drosophila) protein-coding common_peak1_141_1293_-0.177850044959134_10.2486968795129_2.28046945477749 chr13 55727019 55728241 + 2.28046945477749 NA intron (NM_028281, intron 1 of 3) PB1D9|SINE|Alu 262 NM_028281 72562 Mm.28145 NM_028281 ENSMUSG00000021496 Pcbd2 2700061N24Rik|Dcoh2|Dcohm pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 protein-coding unique_peak2_9_77_-0.820880302417829_5.87496206765333_2.28033326638858-2 chr2 60901554 60902214 + 2.28033326638858 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) -20446 NM_001141931 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak2_9_77_-0.820880302417829_5.87496206765333_2.28033326638858 chr15 86164558 86165177 + 2.28033326638858 NA intron (NM_145475, intron 3 of 12) intron (NM_145475, intron 3 of 12) 21274 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding common_peak1_92_797_-0.229428215334755_9.52553082855497_2.28001541342012 chr10 94508188 94509030 + 2.28001541342012 NA Intergenic L1MD2|LINE|L1 -6248 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 AW488095|C630016B22Rik|C88213|Tmcc1 transmembrane and coiled coil domains 3 protein-coding unique_peak2_12_99_-0.715047256320148_6.28633256161465_2.27963627776729 chr2 25621381 25622127 + 2.27963627776729 NA 5' UTR (NM_001109993, exon 1 of 4) 5' UTR (NM_001109993, exon 1 of 4) 248 NM_001040130 51875 Mm.271147 NM_001040130 ENSMUSG00000026939 Tmem141 1110065P14Rik|AI663999|D2Ertd217e transmembrane protein 141 protein-coding unique_peak2_12_99_-0.715047256320148_6.28633256161465_2.27963627776729-2 chr2 28205589 28206293 + 2.27963627776729 NA 5' UTR (NM_001038612, exon 1 of 4) 5' UTR (NM_001038612, exon 1 of 4) 252 NM_019498 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding common_peak2_23_85_0.587510713389997_6.7200201113971_2.27958288534715 chr18 35813148 35813995 + 2.27958288534715 NA Intergenic Intergenic -16247 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding unique_peak2_23_85_0.587510713389997_6.7200201113971_2.27958288534715 chr13 114896952 114897646 + 2.27958288534715 NA intron (NM_008396, intron 2 of 29) intron (NM_008396, intron 2 of 29) 34742 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_16_129_-0.618831552054282_6.71295203700131_2.27958288534712 chr16 52084050 52084630 + 2.27958288534712 NA intron (NM_001033238, intron 3 of 17) GA-rich|Low_complexity|Low_complexity 52791 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_63_346_0.310686032919619_8.59413486903807_2.27937701608186 chr16 92795478 92796610 + 2.27937701608186 NA intron (NM_001111022, intron 2 of 6) B4|SINE|B4 30030 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_209_1670_0.145696523801988_10.7793442799622_2.27904029394975 chr5 38875211 38877320 + 2.27904029394975 NA intron (NM_013748, intron 1 of 18) intron (NM_013748, intron 1 of 18) 428 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding unique_peak2_28_113_0.515773300347827_7.09077666433866_2.27884578039435 chr2 173035873 173036935 + 2.27884578039435 NA Intergenic Intergenic 14502 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak2_28_113_0.515773300347827_7.09077666433866_2.27884578039435 chr2 102383965 102384843 + 2.27884578039435 NA intron (NM_020267, intron 1 of 4) intron (NM_020267, intron 1 of 4) 16496 NM_020267 80985 Mm.315002 NM_020267 ENSMUSG00000027189 Trim44 Dipb|Mc7 tripartite motif-containing 44 protein-coding common_peak2_39_313_-0.376874210074496_8.10618364385438_2.27876817539104 chr17 29436525 29438000 + 2.27876817539104 NA Intergenic Intergenic -53783 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_39_313_-0.376874210074496_8.10618364385438_2.27876817539104 chr7 17024895 17025660 + 2.27876817539104 NA intron (NM_011155, intron 1 of 12) intron (NM_011155, intron 1 of 12) 2637 NM_011155 19060 Mm.3294 NM_011155 ENSMUSG00000003099 Ppp5c AU020526|PP5 protein phosphatase 5, catalytic subunit protein-coding common_peak1_14_41_0.789726698632587_5.78718077209505_2.2780033633024-2 chr14 121377205 121377557 + 2.2780033633024 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 1849 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_14_41_0.789726698632587_5.78718077209505_2.2780033633024-3 chr5 65866104 65866466 + 2.2780033633024 NA intron (NM_001081105, intron 1 of 2) intron (NM_001081105, intron 1 of 2) 2716 NM_001081105 74734 Mm.20323 NM_001081105 ENSMUSG00000029204 Rhoh 5830400A04Rik|AU019774|Arhh ras homolog family member H protein-coding unique_peak1_14_41_0.789726698632587_5.78718077209505_2.2780033633024-3 chr8 70600778 70601147 + 2.2780033633024 NA intron (NM_133772, intron 4 of 16) intron (NM_133772, intron 4 of 16) 6481 NM_023627 71780 Mm.29357 NM_023627 ENSMUSG00000019139 Isyna1 1300017C10Rik|AU018670 myo-inositol 1-phosphate synthase A1 protein-coding unique_peak1_14_41_0.789726698632587_5.78718077209505_2.2780033633024-2 chr14 57710711 57711121 + 2.2780033633024 NA intron (NM_015771, intron 2 of 7) intron (NM_015771, intron 2 of 7) 23502 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_14_41_0.789726698632587_5.78718077209505_2.2780033633024 chr1 136674546 136674930 + 2.2780033633024 NA Intergenic Intergenic -8658 NR_045324 100503460 Mm.30630 NR_045324 ENSMUSG00000097113 Gm19705 - predicted gene, 19705 ncRNA unique_peak1_14_41_0.789726698632587_5.78718077209505_2.2780033633024 chr11 118208284 118208754 + 2.2780033633024 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 4223 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak1_14_41_0.789726698632587_5.78718077209505_2.2780033633024-4 chrX 11846207 11846585 + 2.2780033633024 NA Intergenic Intergenic 234157 NM_175045 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_56_460_-0.304124220879165_8.69656082998976_2.27772705007051 chr12 100887655 100888589 + 2.27772705007051 NA intron (NM_175493, intron 1 of 2) intron (NM_175493, intron 1 of 2) 11402 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding common_peak1_56_460_-0.304124220879165_8.69656082998976_2.27772705007051-2 chr4 8811412 8812450 + 2.27772705007051 NA intron (NM_001277149, intron 7 of 37) (TTTAG)n|Simple_repeat|Simple_repeat 121525 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_41_330_-0.366600451822363_8.18738718089604_2.27748487391673 chr2 105904589 105905348 + 2.27748487391673 NA promoter-TSS (NM_023876) promoter-TSS (NM_023876) 330 NM_028260 66541 Mm.272253 NM_028260 ENSMUSG00000042670 Immp1l 1500034J20Rik|2610528O17Rik|AU042386 IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) protein-coding common_peak2_41_330_-0.366600451822363_8.18738718089604_2.27748487391673 chrX 7672848 7675005 + 2.27748487391673 NA non-coding (NR_037581, exon 6 of 6) non-coding (NR_037581, exon 6 of 6) -2536 NM_019755 18824 Mm.18565 NM_019755 ENSMUSG00000031146 Plp2 mIMA4 proteolipid protein 2 protein-coding common_peak2_143_1023_0.184522295431735_10.0922611477159_2.27638438236123 chrX 94233890 94235959 + 2.27638438236123 NA promoter-TSS (NM_001039059) promoter-TSS (NM_001039059) -6 NM_001039059 236904 Mm.115533 NM_153165 ENSMUSG00000043929 Klhl15 6330500C13Rik kelch-like 15 protein-coding common_peak2_287_2505_0.119963907296231_11.35115265297_2.27553232118642 chr12 40221680 40224449 + 2.27553232118642 NA promoter-TSS (NR_035459) promoter-TSS (NR_035459) 125 NM_013562 15982 Mm.168 NM_013562 ENSMUSG00000001627 Ifrd1 Ifnl|PC4|Tis7 interferon-related developmental regulator 1 protein-coding common_peak1_74_430_0.278605649200568_8.89084688368938_2.27490073191959 chr11 104607526 104608856 + 2.27490073191959 NA intron (NM_016780, intron 1 of 14) CpG 191 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding common_peak1_83_501_0.259155712220439_9.10112141006099_2.27422639413336 chr7 141167774 141169010 + 2.27422639413336 NA intron (NM_001172100, intron 1 of 9) intron (NM_001172100, intron 1 of 9) 294 NM_001172101 107702 Mm.197493 NM_145135 ENSMUSG00000038650 Rnh1 AW546468|C80305|RNH ribonuclease/angiogenin inhibitor 1 protein-coding common_peak1_28_222_-0.452236585407737_7.57478160721644_2.27213731141072-3 chr8 70212785 70213381 + 2.27213731141072 NA promoter-TSS (NM_001007570) promoter-TSS (NM_001007570) -802 NM_001007570 73095 Mm.185413 NM_001007570 ENSMUSG00000002346 Slc25a42 2900084M01Rik solute carrier family 25, member 42 protein-coding common_peak1_28_222_-0.452236585407737_7.57478160721644_2.27213731141072 chr19 56319854 56320442 + 2.27213731141072 NA TTS (NM_146101) TTS (NM_146101) 32210 NM_146101 226243 Mm.25791 NM_146101 ENSMUSG00000025075 Habp2 AI035669|FSAP|HABP|HGFAL|PHBP hyaluronic acid binding protein 2 protein-coding common_peak1_28_222_-0.452236585407737_7.57478160721644_2.27213731141072-2 chr5 21645979 21646538 + 2.27213731141072 NA promoter-TSS (NM_001199632) promoter-TSS (NM_001199632) 274 NM_026034 67211 Mm.260782 NM_026034 ENSMUSG00000038525 Armc10 2810037C14Rik|Svh armadillo repeat containing 10 protein-coding common_peak1_23_182_-0.501924370191948_7.26473765318807_2.27194290170246 chr6 48648615 48649109 + 2.27194290170246 NA intron (NM_212486, intron 1 of 4) ERVL-B4-int|LTR|ERVL 1501 NM_212486 243374 Mm.86514 NM_212486 ENSMUSG00000064262 Gimap8 Gm457|IAN9|IMAP8 GTPase, IMAP family member 8 protein-coding common_peak2_279_2417_0.12168411883348_11.3004405886659_2.27160365649626 chr4 122869715 122876582 + 2.27160365649626 NA intron (NM_007598, intron 1 of 12) intron (NM_007598, intron 1 of 12) 12909 NM_007598 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak2_54_281_0.341739665987122_8.31042118539235_2.27160325056274-2 chr10 95501211 95502171 + 2.27160325056274 NA intron (NM_026065, intron 1 of 5) intron (NM_026065, intron 1 of 5) 236 NM_026065 67270 Mm.30008 NM_026065 ENSMUSG00000062981 Mrpl42 2700009F22Rik|2900055D03Rik|D10Ertd322e|HSPC204|L31mt|MRP-L31|PTD007|Rpml31 mitochondrial ribosomal protein L42 protein-coding common_peak2_54_281_0.341739665987122_8.31042118539235_2.27160325056274 chr1 79775883 79776660 + 2.27160325056274 NA exon (NM_001081210, exon 1 of 4) exon (NM_001081210, exon 1 of 4) 253 NM_001081210 69163 Mm.238455 NM_001081210 ENSMUSG00000026248 Mrpl44 1810030E18Rik|5730593H20Rik|AI463302 mitochondrial ribosomal protein L44 protein-coding common_peak1_83_710_-0.243006483448205_9.35220250789531_2.27121076963288 chr10 81544216 81545323 + 2.27121076963288 NA intron (NM_010301, intron 1 of 6) CpG 277 NM_010301 14672 Mm.260925 NM_010301 ENSMUSG00000034781 Gna11 Dsk7|E430025L19 guanine nucleotide binding protein, alpha 11 protein-coding common_peak1_140_1282_-0.178039851510379_10.2362855293345_2.27096891468955 chr6 28422902 28424264 + 2.27096891468955 NA promoter-TSS (NM_007480) promoter-TSS (NM_007480) -57 NM_007480 11844 Mm.389075 NM_007480 ENSMUSG00000020440 Arf5 - ADP-ribosylation factor 5 protein-coding common_peak1_165_1231_0.169331639659802_10.3514523605248_2.27077104050399 chr11 97743805 97745527 + 2.27077104050399 NA promoter-TSS (NM_054051) promoter-TSS (NM_054051) 38 NM_054051 108083 Mm.39700 NM_054051 ENSMUSG00000018547 Pip4k2b AI848124|PI5P4Kbeta|Pip5k2b|c11 phosphatidylinositol-5-phosphate 4-kinase, type II, beta protein-coding common_peak1_14_114_-0.663445929533027_6.51376708617786_2.26898060365426 chr14 75068195 75068597 + 2.26898060365426 NA intron (NR_030568, intron 2 of 3) intron (NR_030568, intron 2 of 3) 52369 NM_198642 271221 Mm.320280 NM_198642 ENSMUSG00000034959 Rubcnl 5031414D18Rik|Gm744|Gm911|Kiaa0226l RUN and cysteine rich domain containing beclin 1 interacting protein like protein-coding common_peak2_14_114_-0.663445929533027_6.51376708617786_2.26898060365426 chr12 100167605 100168243 + 2.26898060365426 NA Intergenic Intergenic -8271 NM_183155 217827 Mm.224076 NM_183155 ENSMUSG00000021179 Nrde2 6720454P05Rik nrde-2 necessary for RNA interference, domain containing protein-coding unique_peak2_14_114_-0.663445929533027_6.51376708617786_2.26898060365426 chr7 127282396 127283386 + 2.26898060365426 NA Intergenic L3|LINE|CR1 -8832 NM_009266 20768 Mm.20294 NM_009266 ENSMUSG00000049091 Sephs2 Sps2|Ysg3 selenophosphate synthetase 2 protein-coding common_peak2_271_2329_0.123871266177952_11.2480498726306_2.26881259509789 chr9 96392315 96396781 + 2.26881259509789 NA Intergenic B3|SINE|B2 -30249 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak1_227_1857_0.138188555540234_10.9286290641528_2.26869380520017 chr12 85968744 85971425 + 2.26869380520017 NA intron (NM_001081423, intron 29 of 33) intron (NM_001081423, intron 29 of 33) 108957 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak1_123_841_0.202230404040623_9.81879162508671_2.26827406248223 chr17 35909453 35910871 + 2.26827406248223 NA promoter-TSS (NM_028476) promoter-TSS (NM_028476) -94 NM_001142744 73242 Mm.273155 NM_028476 ENSMUSG00000024426 Atat1 0610011P08Rik|2610008K08Rik|2610110G12Rik|3110080J08Rik|Mec17|TAT alpha tubulin acetyltransferase 1 protein-coding common_peak2_123_841_0.202230404040623_9.81879162508671_2.26827406248223 chr10 24711097 24713164 + 2.26827406248223 NA promoter-TSS (NM_008813) promoter-TSS (NM_008813) 29 NM_001308327 18605 Mm.27254 NM_008813 ENSMUSG00000037370 Enpp1 4833416E15Rik|AI428932|C76301|CD203c|E-NPP 1|E-NPP1|Ly-41|M6S1|NPP1|Npps|PC-1|Pca|Pca-1|Pdnp1|ttw|twy ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding common_peak2_347_3689_-0.103382647909193_11.7977137769932_2.26796445476912 chr10 39730594 39733700 + 2.26796445476912 NA promoter-TSS (NM_011264) promoter-TSS (NM_011264) -13 NM_011264 19714 Mm.439723 NM_011264 ENSMUSG00000019841 Rev3l Rev|Rev3|Sez4 REV3 like, DNA directed polymerase zeta catalytic subunit protein-coding common_peak2_73_422_0.281882109277817_8.86545490775886_2.26780898768228 chr15 64278191 64280188 + 2.26780898768228 NA intron (NM_001276462, intron 1 of 27) intron (NM_001276462, intron 1 of 27) 33484 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_62_514_-0.286819462118798_8.86501889101118_2.26780898768228 chr7 143624679 143627220 + 2.26780898768228 NA intron (NM_175649, intron 1 of 7) B1_Mm|SINE|Alu 1896 NM_175649 244237 Mm.247498 NM_175649 ENSMUSG00000045362 Tnfrsf26 Tnfrh3|Tnfrsf24 tumor necrosis factor receptor superfamily, member 26 protein-coding common_peak1_179_1701_-0.153612061748619_10.6562092908117_2.26716123688661 chr4 106910393 106912536 + 2.26716123688661 NA promoter-TSS (NM_023672) promoter-TSS (NM_023672) -6 NM_198438 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak2_114_1014_-0.200697621100709_9.88691520152218_2.26699270071647 chr8 117531233 117533849 + 2.26699270071647 NA intron (NM_172285, intron 2 of 32) intron (NM_172285, intron 2 of 32) 34250 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak1_117_788_0.208257226214723_9.72801010312082_2.26680821865179 chr14 60250640 60251457 + 2.26680821865179 NA intron (NM_170591, intron 1 of 14) CpG 330 NM_170591 71844 Mm.258051 NM_170591 ENSMUSG00000063895 Nupl1 1700017F11Rik|Nup58|mKIAA0410 nucleoporin like 1 protein-coding common_peak2_68_569_-0.27222278880531_9.01870671464945_2.26654899548492 chrX 7877471 7879203 + 2.26654899548492 NA promoter-TSS (NM_138606) promoter-TSS (NM_138606) 31 NM_138606 18715 Mm.347478 NM_138606 ENSMUSG00000031155 Pim2 DXCch3|Pim-2 proviral integration site 2 protein-coding common_peak2_29_119_0.501765836989184_7.15777351410311_2.26562722592994-2 chr8 123235612 123236355 + 2.26562722592994 NA intron (NM_030176, intron 1 of 2) intron (NM_030176, intron 1 of 2) 226 NM_030176 78779 Mm.41459 NM_030176 ENSMUSG00000033594 Spata2l 2610039E05Rik|AI648233|mKIAA4138 spermatogenesis associated 2-like protein-coding common_peak1_29_119_0.501765836989184_7.15777351410311_2.26562722592994 chr11 102189620 102190312 + 2.26562722592994 NA exon (NM_175935, exon 1 of 6) exon (NM_175935, exon 1 of 6) 267 NM_175935 68401 Mm.22385 NM_175935 ENSMUSG00000034793 G6pc3 0710001K01Rik|AU019276|AU045429|AV128920|AW545836|UGRP glucose 6 phosphatase, catalytic, 3 protein-coding common_peak1_29_119_0.501765836989184_7.15777351410311_2.26562722592994-2 chr19 53437995 53438702 + 2.26562722592994 NA Intergenic Intergenic 26448 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak2_29_119_0.501765836989184_7.15777351410311_2.26562722592994 chr2 35708207 35709170 + 2.26562722592994 NA intron (NM_001290639, intron 2 of 13) intron (NM_001290639, intron 2 of 13) 11956 NM_001290639 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_314_2810_0.112847008449759_11.5132912426052_2.26514115308132 chr2 45108517 45111865 + 2.26514115308132 NA promoter-TSS (NR_110572) promoter-TSS (NR_110572) 86 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak1_94_816_-0.225722477870471_9.56133102921045_2.26505006591649 chr9 105131379 105132136 + 2.26505006591649 NA promoter-TSS (NM_029385) promoter-TSS (NM_029385) 48 NM_029385 75686 Mm.305810 NM_029385 ENSMUSG00000032565 Nudt16 2310041H06Rik|2810047L04Rik|2900006H04Rik|AI851783 nudix (nucleoside diphosphate linked moiety X)-type motif 16 protein-coding common_peak2_94_816_-0.225722477870471_9.56133102921045_2.26505006591649 chr1 36718554 36720965 + 2.26505006591649 NA intron (NR_040290, intron 2 of 8) intron (NR_040290, intron 2 of 8) 5221 NR_040290 71166 Mm.157049 NR_040290 ENSMUSG00000102416 4933424G06Rik 1700104I15Rik RIKEN cDNA 4933424G06 gene ncRNA common_peak1_162_1203_0.170224767161669_10.3187320603405_2.26347191922468 chr3 109123097 109124504 + 2.26347191922468 NA intron (NM_172685, intron 1 of 9) intron (NM_172685, intron 1 of 9) 651 NM_172685 229731 Mm.33574 NM_172685 ENSMUSG00000040322 Slc25a24 2610016M12Rik solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 protein-coding common_peak2_86_738_-0.236632723480298_9.411114192406_2.2632480739649 chr8 88118110 88119929 + 2.2632480739649 NA intron (NM_029074, intron 1 of 5) CpG 260 NM_029074 382030 Mm.216574 NM_029074 ENSMUSG00000036810 Cnep1r1 5033428A16Rik|NEP1-R1|Tmem188 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding common_peak1_29_230_-0.443092608818354_7.63020273700688_2.26275064842463 chr2 128426210 128426854 + 2.26275064842463 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 2819 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_157_1155_0.173785719798994_10.2618185424002_2.26273812867177 chr11 106674846 106676097 + 2.26273812867177 NA intron (NM_001305158, intron 12 of 14) intron (NM_001305158, intron 12 of 14) 39810 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak2_201_1946_-0.143576663928483_10.8552488367561_2.2624744055792 chr8 70804473 70809489 + 2.2624744055792 NA Intergenic Intergenic -1468 NM_008353 16161 Mm.731 NM_008353 ENSMUSG00000000791 Il12rb1 CD212|IL-12R[b] interleukin 12 receptor, beta 1 protein-coding common_peak1_61_332_0.313916148849401_8.53633644149596_2.26222648017521 chr16 32444674 32445787 + 2.26222648017521 NA intron (NM_001163160, intron 1 of 8) B1_Mus1|SINE|Alu 14000 NM_001163160 13026 Mm.98775 NM_009981 ENSMUSG00000005615 Pcyt1a CTalpha|Cctalpha|Ctpct|Cttalpha phosphate cytidylyltransferase 1, choline, alpha isoform protein-coding common_peak1_139_1271_-0.178212618388109_10.2237766460903_2.26148317833961 chr11 70029330 70030961 + 2.26148317833961 NA intron (NM_001109752, intron 2 of 19) intron (NM_001109752, intron 2 of 19) 11540 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs, large homolog 4 (Drosophila) protein-coding common_peak1_61_505_-0.289699058773648_8.83814404530749_2.26092822100285 chr7 30169348 30170314 + 2.26092822100285 NA promoter-TSS (NM_011980) promoter-TSS (NM_011980) -91 NM_001033540 330503 Mm.434058 NM_001033540 ENSMUSG00000066647 Gm5113 B430201F14|EG330503 predicted gene 5113 protein-coding common_peak1_192_1845_-0.147381545199515_10.776496065046_2.26089383823495 chr11 118417815 118419696 + 2.26089383823495 NA intron (NM_029502, intron 1 of 4) intron (NM_029502, intron 1 of 4) 363 NM_001025617 76025 Mm.177551 NM_029502 ENSMUSG00000025575 Cant1 5830420C20Rik|Apy1h|D11Bwg0554e|Entpd8|SCAN-1|Shapy calcium activated nucleotidase 1 protein-coding common_peak1_52_424_-0.315577265581952_8.57353039823409_2.26034521785239 chr2 109280848 109281565 + 2.26034521785239 NA intron (NM_139303, intron 1 of 16) intron (NM_139303, intron 1 of 16) 468 NM_139303 228421 Mm.274086 NM_139303 ENSMUSG00000027115 Kif18a AU024633|B130001M12Rik|gcd2 kinesin family member 18A protein-coding common_peak1_144_1033_0.182748431075956_10.1053946858529_2.25845904227864 chr6 67267036 67268342 + 2.25845904227864 NA intron (NM_025814, intron 1 of 7) CpG 710 NM_025814 66870 Mm.240490 NM_025814 ENSMUSG00000036371 Serbp1 1200009K13Rik|9330147J08Rik|AL022786|Pairbp1 serpine1 mRNA binding protein 1 protein-coding common_peak2_149_1079_0.179946422425193_10.1667888082634_2.25833076811975 chr6 113237097 113239304 + 2.25833076811975 NA intron (NM_026849, intron 1 of 18) intron (NM_026849, intron 1 of 18) 357 NM_026849 97287 Mm.197816 NM_026849 ENSMUSG00000030269 Mtmr14 1110061O04Rik|AW553738|C76151 myotubularin related protein 14 protein-coding common_peak2_159_1483_-0.164304215430958_10.4531232689053_2.25779481195167 chr4 135855110 135857324 + 2.25779481195167 NA 5' UTR (NM_001284196, exon 1 of 6) 5' UTR (NM_001284196, exon 1 of 6) 146 NM_010178 14105 Mm.10229 NM_010178 ENSMUSG00000028676 Srsf10 FUSIP2|Fusip1|NSSR1|NSSR2|Nssr|SRrp40|Sfrs13a|Srsf13a|TASR|TASR1|TASR2 serine/arginine-rich splicing factor 10 protein-coding common_peak2_196_1538_0.15132910029709_10.6634420664768_2.25746388352811 chr2 44925859 44927885 + 2.25746388352811 NA Intergenic CpG -65250 NM_172662 227835 Mm.314312 NM_172662 ENSMUSG00000036890 Gtdc1 E330008O22Rik glycosyltransferase-like domain containing 1 protein-coding common_peak2_171_1613_-0.157473070651118_10.5776883279522_2.25745082145531 chr4 126752492 126754570 + 2.25745082145531 NA promoter-TSS (NM_133886) promoter-TSS (NM_133886) -24 NM_001035525 100317 Mm.206206 NM_133886 ENSMUSG00000028830 AU040320 A730047D20Rik|AAVR|Kiaa0319l expressed sequence AU040320 protein-coding common_peak1_110_974_-0.205340241272276_9.82658828800083_2.25744710205894 chr9 44986806 44987681 + 2.25744710205894 NA TTS (NM_013487) TTS (NM_013487) 5457 NM_013487 12500 Mm.4527 NM_013487 ENSMUSG00000032094 Cd3d T3d CD3 antigen, delta polypeptide protein-coding common_peak1_77_653_-0.253591064703865_9.22635129314615_2.25743912409414 chr11 104581527 104582705 + 2.25743912409414 NA intron (NM_010858, intron 4 of 8) ID_B1|SINE|B4 -19918 NR_130177 100415912 Mm.446786 NR_130177 Gm11665 Gm11664|OTTMUSG00000003182|OTTMUSG00000003183 predicted gene 11665 ncRNA common_peak1_264_2253_0.125575552149213_11.2010595762468_2.25726894378098 chr4 120824747 120826312 + 2.25726894378098 NA intron (NM_001048168, intron 1 of 9) CpG 212 NM_001277095 18046 Mm.435590 NM_008692 ENSMUSG00000032897 Nfyc - nuclear transcription factor-Y gamma protein-coding common_peak1_93_583_0.239918839732358_9.3097839787462_2.25629665801975 chr19 44106658 44108008 + 2.25629665801975 NA exon (NM_001162410, exon 1 of 21) exon (NM_001162410, exon 1 of 21) 144 NM_007700 12675 Mm.3996 NM_007700 ENSMUSG00000025199 Chuk AI256658|Chuk1|Fbx24|Fbxo24|IKBKA|IKK1|Ikka|NFKBIKA conserved helix-loop-helix ubiquitous kinase protein-coding common_peak2_81_690_-0.244486324136476_9.31029873832002_2.25629665801955 chrX 50804568 50806702 + 2.25629665801955 NA Intergenic Intergenic -35736 NM_133729 70415 Mm.46254 NM_133729 ENSMUSG00000031112 Stk26 2610018G03Rik|Mst4 serine/threonine kinase 26 protein-coding common_peak1_358_3826_-0.100905086420982_11.851545642458_2.25628066511585 chr6 48684034 48688080 + 2.25628066511585 NA intron (NM_175048, intron 1 of 4) intron (NM_175048, intron 1 of 4) 1479 NM_174990 107526 Mm.333048 NM_174990 ENSMUSG00000054435 Gimap4 AU019574|E430007K16Rik|Ian-1|Ian1|Imap4 GTPase, IMAP family member 4 protein-coding common_peak1_85_728_-0.237435522886631_9.39105724288362_2.25527529497002 chr4 107879270 107880420 + 2.25527529497002 NA promoter-TSS (NM_001282737) promoter-TSS (NM_001282737) 90 NM_001282737 17149 Mm.808 NM_001282737 ENSMUSG00000028609 Magoh Mago-m|Mos2 mago homolog, exon junction complex core component protein-coding common_peak2_85_517_0.25553119375375_9.14457388456343_2.25526062316313 chr13 55104573 55106076 + 2.25526062316313 NA promoter-TSS (NM_012017) promoter-TSS (NM_012017) 15 NM_012017 26919 Mm.22795 NM_012017 ENSMUSG00000021481 Zfp346 Jaz|Znf346 zinc finger protein 346 protein-coding common_peak1_30_238_-0.434184603246442_7.68377450635753_2.25510198618753 chr1 91350940 91351652 + 2.25510198618753 NA intron (NM_027551, intron 1 of 7) intron (NM_027551, intron 1 of 7) 223 NM_027551 70788 Mm.68617 NM_027551 ENSMUSG00000026308 Klhl30 4631423F02Rik kelch-like 30 protein-coding common_peak1_30_238_-0.434184603246442_7.68377450635753_2.25510198618753-2 chr2 26498370 26499038 + 2.25510198618753 NA intron (NM_008714, intron 2 of 33) RSINE1|SINE|B4 5118 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak2_30_125_0.48940228123439_7.22198106411711_2.25501168517367 chr13 48551972 48552853 + 2.25501168517367 NA Intergenic Intergenic -14140 NR_029725 387244 NR_029725 ENSMUSG00000065421 Mirlet7a-1 Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1 microRNA let7a-1 ncRNA common_peak1_30_125_0.48940228123439_7.22198106411711_2.25501168517367 chr1 37472861 37473428 + 2.25501168517367 NA intron (NM_001290801, intron 4 of 14) B2_Mm2|SINE|B2 15461 NR_024017 77633 Mm.483177 NR_024017 ENSMUSG00000103948 4930594C11Rik - G1 to S phase transition pseudogene pseudo common_peak2_30_125_0.48940228123439_7.22198106411711_2.25501168517367-2 chr8 86893093 86893818 + 2.25501168517367 NA Intergenic Intergenic -8197 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_349_3214_0.105560590372901_11.7033833174018_2.25475292131603 chr15 64074686 64077270 + 2.25475292131603 NA Intergenic Intergenic -15530 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_141_1005_0.185357267227847_10.0670932234194_2.25469783055284 chr7 139247691 139249136 + 2.25469783055284 NA promoter-TSS (NM_001098636) promoter-TSS (NM_001098636) -69 NM_001033206 101631 Mm.334300 NM_001033206 ENSMUSG00000060260 Pwwp2b AI594893|D7Ertd517e|D930023J19Rik|Pwwp2 PWWP domain containing 2B protein-coding common_peak1_198_1559_0.149651480097807_10.6821560537985_2.25452954645717 chr9 74952401 74954103 + 2.25452954645717 NA 5' UTR (NM_001113283, exon 1 of 13) 5' UTR (NM_001113283, exon 1 of 13) 199 NM_001113283 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding common_peak1_166_1242_0.167136024635475_10.3631785933702_2.25432530718055 chr2 181380618 181382323 + 2.25432530718055 NA TTS (NM_001048148) TTS (NM_001048148) 235 NM_023684 72699 Mm.440138 NM_023684 ENSMUSG00000090077 Lime1 2810038K19Rik|LIME Lck interacting transmembrane adaptor 1 protein-coding common_peak2_60_496_-0.292582590515314_8.81081074630463_2.25427039322237 chr16 55887529 55888981 + 2.25427039322237 NA intron (NM_001134457, intron 2 of 5) intron (NM_001134457, intron 2 of 5) 7024 NM_001134457 385658 Mm.310635 NM_001134457 ENSMUSG00000075033 Nxpe3 Fam55c|Gm1752|Gm611 neurexophilin and PC-esterase domain family, member 3 protein-coding common_peak1_66_550_-0.275364808421434_8.96822610436044_2.25394827349496 chr15 89128312 89129160 + 2.25394827349496 NA promoter-TSS (NM_199198) promoter-TSS (NM_199198) -36 NR_028449 170787 Mm.203954 NM_199198 ENSMUSG00000062906 Hdac10 AW548891|Hd10 histone deacetylase 10 protein-coding common_peak2_24_190_-0.491413635899365_7.33172201008607_2.25234667936076 chr2 33907924 33909239 + 2.25234667936076 NA Intergenic Intergenic -20635 NM_175184 72543 Mm.254914 NM_175184 ENSMUSG00000038740 Mvb12b 2610200O14Rik|2610528K11Rik|AI414895|Fam125b multivesicular body subunit 12B protein-coding common_peak2_182_1733_-0.151234216021578_10.684271075211_2.25215519414564 chr12 82213329 82216749 + 2.25215519414564 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 45023 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak2_17_136_-0.593346721087859_6.8013587224166_2.25102766811788 chr1 52388395 52389556 + 2.25102766811788 NA Intergenic Intergenic 111473 NM_008667 17936 Mm.25903 NM_008667 ENSMUSG00000002881 Nab1 - Ngfi-A binding protein 1 protein-coding common_peak1_24_91_0.562453236079371_6.8047885740967_2.25102766811788-4 chr7 139213397 139213913 + 2.25102766811788 NA promoter-TSS (NM_001162540) promoter-TSS (NM_001162540) -348 NM_001162540 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding common_peak1_24_91_0.562453236079371_6.8047885740967_2.25102766811788-2 chr2 102384049 102384648 + 2.25102766811788 NA intron (NM_020267, intron 1 of 4) intron (NM_020267, intron 1 of 4) 16552 NM_020267 80985 Mm.315002 NM_020267 ENSMUSG00000027189 Trim44 Dipb|Mc7 tripartite motif-containing 44 protein-coding common_peak1_24_91_0.562453236079371_6.8047885740967_2.25102766811788 chr10 7062182 7062723 + 2.25102766811788 NA Intergenic RMER4B|LTR|ERVK -39267 NM_001033391 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak1_24_91_0.562453236079371_6.8047885740967_2.25102766811788-3 chr6 85587802 85588289 + 2.25102766811788 NA intron (NM_145223, intron 1 of 22) intron (NM_145223, intron 1 of 22) 514 NM_145223 236266 Mm.246967 NM_145223 ENSMUSG00000063810 Alms1 bbb Alstrom syndrome 1 protein-coding common_peak1_151_1099_0.176913328543936_10.191744472684_2.25085478847624 chr3 108571019 108572439 + 2.25085478847624 NA promoter-TSS (NM_025444) promoter-TSS (NM_025444) 30 NM_025444 99730 Mm.24431 NM_025444 ENSMUSG00000048100 Taf13 1810004N01Rik|2010309N11Rik|AI847295|TAFII18 TATA-box binding protein associated factor 13 protein-coding common_peak1_51_261_0.348610554289838_8.20772827868237_2.25077513759977 chr9 78395784 78396437 + 2.25077513759977 NA exon (NM_001191044, exon 1 of 17) exon (NM_001191044, exon 1 of 17) 333 NM_001191044 100048658 Mm.158166 NM_001191044 ENSMUSG00000070291 Ddx43 ENSMUSG00000070291|OTTMUSG00000019690 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 protein-coding common_peak2_127_877_0.198013067148878_9.8770836631098_2.25044936339389 chr15 85810673 85812348 + 2.25044936339389 NA intron (NM_197998, intron 1 of 4) CpG 187 NM_001164626 72355 Mm.33706 NM_197998 ENSMUSG00000064284 Cdpf1 2210021J22Rik cysteine rich, DPF motif domain containing 1 protein-coding unique_peak2_20_159_-0.544453451088865_7.04970136934293_2.25007364298377-2 chr4 11913926 11914602 + 2.25007364298377 NA Intergenic Intergenic 51449 NM_001098231 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding common_peak1_20_159_-0.544453451088865_7.04970136934293_2.25007364298377-2 chr3 36572152 36572474 + 2.25007364298377 NA promoter-TSS (NM_009828) promoter-TSS (NM_009828) -317 NM_009828 12428 Mm.4189 NM_009828 ENSMUSG00000027715 Ccna2 AA408589|Ccn-1|Ccn1|Ccna|CycA2|Cyca cyclin A2 protein-coding unique_peak2_20_159_-0.544453451088865_7.04970136934293_2.25007364298377 chr13 24412823 24413940 + 2.25007364298377 NA intron (NM_001284519, intron 3 of 17) RMER1C|Other|Other -1741 NM_007717 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding common_peak1_20_159_-0.544453451088865_7.04970136934293_2.25007364298377-3 chr4 59286706 59287264 + 2.25007364298377 NA Intergenic MER58B|DNA|hAT-Charlie 26934 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_20_159_-0.544453451088865_7.04970136934293_2.25007364298377 chrX 9027704 9028774 + 2.25007364298377 NA Intergenic Intergenic -5247 NM_031261 83457 Mm.388703 NM_031261 ENSMUSG00000071815 Fthl17e Fthl17 ferritin, heavy polypeptide-like 17, member E protein-coding common_peak1_20_159_-0.544453451088865_7.04970136934293_2.25007364298377 chr12 21462397 21462763 + 2.25007364298377 NA Intergenic B1_Mur3|SINE|Alu -45144 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_76_446_0.272590519589748_8.94042628097819_2.24994487833348 chr9 116337815 116338609 + 2.24994487833348 NA Intergenic Intergenic -162849 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_31_246_-0.425501657273154_7.7356164029481_2.24900801313975-2 chr9 50739340 50740016 + 2.24900801313975 NA TTS (NM_025865) TTS (NM_025865) -1943 NM_001311069 330938 Mm.82598 NM_178118 ENSMUSG00000032064 Dixdc1 4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735 DIX domain containing 1 protein-coding common_peak1_31_246_-0.425501657273154_7.7356164029481_2.24900801313975 chr7 28692819 28693677 + 2.24900801313975 NA 5' UTR (NM_001163702, exon 1 of 5) 5' UTR (NM_001163702, exon 1 of 5) 104 NM_001163702 233040 Mm.116116 NM_207238 ENSMUSG00000037463 Fbxo27 E130008B10Rik|FBG5|Gm161 F-box protein 27 protein-coding common_peak1_124_850_0.20110545732874_9.83356805035033_2.24887103364347 chr10 96407133 96408813 + 2.24887103364347 NA Intergenic Intergenic 181766 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_17_55_0.697330439815063_6.15602014196514_2.24860704148035-4 chr5 34198387 34198855 + 2.24860704148035 NA intron (NM_001015039, intron 10 of 12) intron (NM_001015039, intron 10 of 12) -10911 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding unique_peak2_11_91_-0.736398799151273_6.15536255648138_2.24860704148035-3 chr16 10665125 10665891 + 2.24860704148035 NA intron (NM_001204229, intron 18 of 22) intron (NM_001204229, intron 18 of 22) 120028 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding unique_peak2_11_91_-0.736398799151273_6.15536255648138_2.24860704148035 chr1 85655757 85656567 + 2.24860704148035 NA intron (NM_013673, intron 1 of 19) intron (NM_013673, intron 1 of 19) 6174 NM_001313714 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding common_peak1_17_55_0.697330439815063_6.15602014196514_2.24860704148035-2 chr16 91729320 91729719 + 2.24860704148035 NA promoter-TSS (NM_133679) promoter-TSS (NM_133679) 148 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding common_peak1_17_55_0.697330439815063_6.15602014196514_2.24860704148035-5 chr7 58722885 58723239 + 2.24860704148035 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 64860 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak2_11_91_-0.736398799151273_6.15536255648138_2.24860704148035-2 chr14 121954156 121954784 + 2.24860704148035 NA exon (NM_183031, exon 2 of 2) exon (NM_183031, exon 2 of 2) 10723 NM_183031 321019 Mm.265618 NM_183031 ENSMUSG00000051212 Gpr183 Ebi2 G protein-coupled receptor 183 protein-coding unique_peak2_11_91_-0.736398799151273_6.15536255648138_2.24860704148035-5 chr5 139044652 139045402 + 2.24860704148035 NA intron (NM_001253890, intron 7 of 10) intron (NM_001253890, intron 7 of 10) -50074 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding unique_peak2_11_91_-0.736398799151273_6.15536255648138_2.24860704148035-4 chr17 47694458 47695107 + 2.24860704148035 NA promoter-TSS (NM_001290337) promoter-TSS (NM_001290337) -46 NM_001290337 381104 Mm.392206 NM_001290337 ENSMUSG00000079444 Prickle4 Gm939 prickle planar cell polarity protein 4 protein-coding common_peak1_17_55_0.697330439815063_6.15602014196514_2.24860704148035 chr13 48625769 48626099 + 2.24860704148035 NA promoter-TSS (NM_001301781) promoter-TSS (NM_001301781) -262 NM_001301781 218232 Mm.315089 NM_207232 ENSMUSG00000038042 Ptpdc1 AI843923|AW456874|Naa-1|Ptpcd1 protein tyrosine phosphatase domain containing 1 protein-coding common_peak1_17_55_0.697330439815063_6.15602014196514_2.24860704148035-3 chr4 97860599 97861131 + 2.24860704148035 NA intron (NM_010905, intron 2 of 10) intron (NM_010905, intron 2 of 10) 83239 NM_010905 18027 Mm.31274 NM_010905 ENSMUSG00000028565 Nfia 1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A nuclear factor I/A protein-coding common_peak2_135_1229_-0.181069405693361_10.1739078973799_2.24816737900087 chr15 31223579 31225817 + 2.24816737900087 NA intron (NM_146057, intron 1 of 3) CpG 313 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak1_20_70_0.627727524293816_6.46361088165159_2.24743646498824 chr1 40790277 40790703 + 2.24743646498824 NA exon (NM_172499, exon 1 of 6) exon (NM_172499, exon 1 of 6) 167 NM_172499 211798 Mm.235443 NM_172499 ENSMUSG00000041945 Mfsd9 4931419K03Rik major facilitator superfamily domain containing 9 protein-coding common_peak1_20_70_0.627727524293816_6.46361088165159_2.24743646498824-3 chr12 52503849 52504304 + 2.24743646498824 NA Intergenic CpG -12001 NM_009706 11855 Mm.35059 NM_009706 ENSMUSG00000035133 Arhgap5 p190-B|p190B Rho GTPase activating protein 5 protein-coding common_peak1_20_70_0.627727524293816_6.46361088165159_2.24743646498824-2 chr10 6989036 6989437 + 2.24743646498824 NA intron (NM_001304955, intron 5 of 6) intron (NM_001304955, intron 5 of 6) -8771 NM_001170801 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak1_20_70_0.627727524293816_6.46361088165159_2.24743646498824-4 chr7 130800393 130800812 + 2.24743646498824 NA intron (NM_001081038, intron 9 of 15) intron (NM_001081038, intron 9 of 15) 26533 NM_001081038 330660 Mm.271550 NM_001081038 ENSMUSG00000040298 Btbd16 E330040A16Rik BTB (POZ) domain containing 16 protein-coding common_peak2_92_796_-0.227619193102882_9.52462631743903_2.24732714740558 chr16 4683209 4684719 + 2.24732714740558 NA promoter-TSS (NM_001135112) promoter-TSS (NM_001135112) -106 NM_023646 83945 Mm.248337 NM_023646 ENSMUSG00000004069 Dnaja3 1200003J13Rik|1810053A11Rik|C81173|Tid-1|Tid1l DnaJ heat shock protein family (Hsp40) member A3 protein-coding common_peak2_229_1879_0.136661755593185_10.9448478243616_2.24673658801103 chr15 100685868 100688973 + 2.24673658801103 NA intron (NM_033612, intron 1 of 7) intron (NM_033612, intron 1 of 7) 500 NM_033612 109901 Mm.2131 NM_033612 ENSMUSG00000023031 Cela1 1810009A17Rik|1810062B19Rik|Ela-1|Ela1|PC-TsF chymotrypsin-like elastase family, member 1 protein-coding common_peak1_31_131_0.478471454953071_7.28362984683499_2.24667335075371 chr17 32829590 32830298 + 2.24667335075371 NA intron (NM_001293229, intron 1 of 2) intron (NM_001293229, intron 1 of 2) 317 NM_001293229 240064 Mm.476307 NM_177359 ENSMUSG00000095253 Zfp799 6030490I01Rik zinc finger protein 799 protein-coding common_peak2_153_1419_-0.168341362432622_10.3875045331757_2.24656420567562 chr9 119894181 119896285 + 2.24656420567562 NA intron (NM_026236, intron 1 of 18) CpG 338 NM_026236 67561 Mm.104789 NM_026236 ENSMUSG00000032512 Wdr48 8430408H12Rik|Uaf1|mKIAA1449 WD repeat domain 48 protein-coding common_peak1_585_6855_-0.0749454197332948_12.7056786842459_2.24647328587226 chr11 34780985 34785308 + 2.24647328587226 NA intron (NM_033374, intron 1 of 51) intron (NM_033374, intron 1 of 51) 759 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding common_peak2_231_1900_0.135957431423083_10.9605215323601_2.24628478857586 chr4 32341963 32344974 + 2.24628478857586 NA Intergenic Intergenic -73967 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak2_49_398_-0.327617432899604_8.47643621977254_2.24606975902739 chr1 164974738 164977068 + 2.24606975902739 NA Intergenic Intergenic -40393 NM_008510 16963 Mm.190 NM_008510 ENSMUSG00000026573 Xcl1 AI661682|ATAC|LTN|Lptn|SCM-1|SCM-1a|Scyc1 chemokine (C motif) ligand 1 protein-coding common_peak1_195_1529_0.150784921703382_10.6547083984317_2.24602980343567 chr11 62574820 62577438 + 2.24602980343567 NA intron (NM_011706, intron 2 of 15) intron (NM_011706, intron 2 of 15) 1643 NM_011706 22368 Mm.288064 NM_011706 ENSMUSG00000018507 Trpv2 GRC|OTRPC2|VRL-1|Vrl1 transient receptor potential cation channel, subfamily V, member 2 protein-coding common_peak2_92_575_0.240891719445278_9.29037086116495_2.24591137089029 chr12 55199001 55200251 + 2.24591137089029 NA promoter-TSS (NM_028527).2 promoter-TSS (NM_028527).2 34 NM_028527 73385 Mm.439875 NM_028527 ENSMUSG00000095595 Fam177a 1700047I17Rik|1700047I17Rik1|C14orf24|D730001C10Rik|Fam177a1 family with sequence similarity 177, member A protein-coding common_peak2_115_771_0.209430899617201_9.69717248707668_2.2450933126587 chr14 27242273 27245058 + 2.2450933126587 NA intron (NM_027871, intron 1 of 10) intron (NM_027871, intron 1 of 10) 5655 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_132_1198_-0.183715630751863_10.1357581280383_2.24488887245477 chr9 44395811 44398124 + 2.24488887245477 NA promoter-TSS (NM_001293631) promoter-TSS (NM_001293631) 40 NM_001293631 14385 Mm.30087 NM_008063 ENSMUSG00000032114 Slc37a4 100043178|G6PT|G6pt1|GSD-1b|mG6PT solute carrier family 37 (glucose-6-phosphate transporter), member 4 protein-coding common_peak1_75_633_-0.254750204369804_9.1809639279545_2.24441499843984 chr10 24148827 24149944 + 2.24441499843984 NA promoter-TSS (NM_016797) promoter-TSS (NM_016797) 68 NM_016797 53331 Mm.248042 NM_016797 ENSMUSG00000019998 Stx7 AI315064|AI317144|AW107239|Syn7 syntaxin 7 protein-coding common_peak1_32_254_-0.417033489197978_7.78583669225987_2.24431034540136 chr5 123397338 123397995 + 2.24431034540136 NA intron (NM_177582, intron 1 of 8) intron (NM_177582, intron 1 of 8) 2868 NM_133917 208104 Mm.83277 NM_133917 ENSMUSG00000038342 Mlxip AW228700|Mir|bHLHe36 MLX interacting protein protein-coding common_peak1_32_254_-0.417033489197978_7.78583669225987_2.24431034540136-2 chr7 100845896 100846516 + 2.24431034540136 NA 3' UTR (NM_177073, exon 11 of 11) 3' UTR (NM_177073, exon 11 of 11) 17207 NM_177073 320100 Mm.40336 NM_177073 ENSMUSG00000008318 Relt E430021K24Rik|Tnfrsf19l RELT tumor necrosis factor receptor protein-coding common_peak2_48_389_-0.330454076838926_8.44210327533015_2.24397112288052 chr5 106963806 106965121 + 2.24397112288052 NA promoter-TSS (NM_001271566) promoter-TSS (NM_001271566) -98 NM_001271566 12545 Mm.20842 NM_009863 ENSMUSG00000029283 Cdc7 AI597260|Cdc7l1|muCdc7 cell division cycle 7 (S. cerevisiae) protein-coding common_peak1_65_362_0.300106520851486_8.65387899842149_2.24390787647817 chr9 124281656 124282749 + 2.24390787647817 NA Intergenic Intergenic 30492 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak2_49_247_0.358431192935866_8.13341190685481_2.24357613801764 chr17 87265257 87266526 + 2.24357613801764 NA promoter-TSS (NM_139295) promoter-TSS (NM_139295) 56 NM_176808 193813 Mm.30251 NM_139295 ENSMUSG00000024150 Mcfd2 1810021C21Rik|F5f8d|Lman1ip|Sdnsf multiple coagulation factor deficiency 2 protein-coding common_peak1_132_923_0.192151271246303_9.94782467703921_2.24343234401111 chr4 55349932 55351077 + 2.24343234401111 NA intron (NM_009011, intron 1 of 9) CpG 462 NM_009011 19359 Mm.196846 NM_009011 ENSMUSG00000028426 Rad23b 0610007D13Rik|AV001138|HR23B|mHR23B|p58 RAD23 homolog B, nucleotide excision repair protein protein-coding unique_peak1_11_28_0.929182161778168_5.32257207601666_2.24341076832583 chr2 170127588 170127890 + 2.24341076832583 NA intron (NM_001159683, intron 2 of 6) intron (NM_001159683, intron 2 of 6) 3481 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_160_1184_0.171325569573357_10.2963341285723_2.24253387058335 chr1 91397886 91399599 + 2.24253387058335 NA promoter-TSS (NM_023343) promoter-TSS (NM_023343) 41 NM_023343 67444 Mm.337240 NM_023343 ENSMUSG00000026309 Ilkap 0710007A14Rik|1600009O09Rik|PP2C-DELTA integrin-linked kinase-associated serine/threonine phosphatase 2C protein-coding common_peak1_129_1167_-0.186297727360765_10.0966756951996_2.24222367609947 chr3 58691299 58692714 + 2.24222367609947 NA promoter-TSS (NR_045167) promoter-TSS (NR_045167) 382 NM_009174 20439 Mm.2847 NM_009174 ENSMUSG00000036432 Siah2 AA415433|Sinh2 seven in absentia 2 protein-coding common_peak2_75_438_0.275511696234245_8.91583297765248_2.2422069269259 chr11 51618861 51620509 + 2.2422069269259 NA promoter-TSS (NM_026631) promoter-TSS (NM_026631) -88 NM_026631 52530 Mm.28203 NM_026631 ENSMUSG00000001056 Nhp2 2410130M07Rik|D11Ertd175e|Nola2 NHP2 ribonucleoprotein protein-coding unique_peak2_8_70_-0.87167406881837_5.7139100850955_2.24219372254142-2 chrX 107264347 107265084 + 2.24219372254142 NA intron (NM_001177781, intron 2 of 4) intron (NM_001177781, intron 2 of 4) 8687 NM_001033251 213439 Mm.383562 NM_001033251 ENSMUSG00000073008 Gpr174 Gm376|Lypsr3 G protein-coupled receptor 174 protein-coding unique_peak2_8_70_-0.87167406881837_5.7139100850955_2.24219372254142 chr10 12823950 12824616 + 2.24219372254142 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 37452 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_58_478_-0.298355440694355_8.754704125389_2.24167609973222 chr8 83972793 83973477 + 2.24167609973222 NA 5' UTR (NM_008854, exon 1 of 10) 5' UTR (NM_008854, exon 1 of 10) 157 NM_008854 18747 Mm.19111 NM_008854 ENSMUSG00000005469 Prkaca PKCD|Pkaca protein kinase, cAMP dependent, catalytic, alpha protein-coding common_peak1_150_1089_0.178407965321263_10.1793164023249_2.2414502592725 chr1 170214544 170215702 + 2.2414502592725 NA exon (NM_010633, exon 1 of 8) exon (NM_010633, exon 1 of 8) 270 NM_010633 16589 Mm.209150 NM_010633 ENSMUSG00000026667 Uhmk1 4732477C12Rik|4930500M09Rik|AA673513|AI449218|AU021979|C820018A03Rik|KIS|Kist|OTTMUSG00000021542|P-CIP2 U2AF homology motif (UHM) kinase 1 protein-coding common_peak1_33_262_-0.408770417131775_7.83453378072641_2.24087142512772 chr4 140953546 140954087 + 2.24087142512772 NA intron (NR_045911, intron 1 of 3) B1_Mur4|SINE|Alu 4086 NR_045911 100126227 Mm.404073 NR_045911 ENSMUSG00000087698 Gm13031 OTTMUSG00000010081 predicted gene 13031 ncRNA common_peak1_181_1389_0.158088186295533_10.5199132607586_2.24038357447544 chr15 81398965 81400664 + 2.24038357447544 NA promoter-TSS (NM_133726) promoter-TSS (NM_133726) -120 NM_133726 70356 Mm.180337 NM_133726 ENSMUSG00000022403 St13 1110007I03Rik|3110002K08Rik|AW555194|HIP|HOP|HSPABP|HSPABP1|PRO0786|SNC6|p48 suppression of tumorigenicity 13 protein-coding common_peak2_32_137_0.468795490882711_7.34292220221952_2.24033868076276 chr1 36068245 36069262 + 2.24033868076276 NA exon (NM_015818, exon 1 of 2) exon (NM_015818, exon 1 of 2) 353 NM_015818 50785 Mm.213566 NM_015818 ENSMUSG00000045216 Hs6st1 6Ost1 heparan sulfate 6-O-sulfotransferase 1 protein-coding common_peak1_32_137_0.468795490882711_7.34292220221952_2.24033868076276 chr4 139213503 139214123 + 2.24033868076276 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 19702 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_126_1136_-0.188805844718203_10.0566136165331_2.24022359064158 chr4 129599991 129601562 + 2.24022359064158 NA promoter-TSS (NM_018799) promoter-TSS (NM_018799) 69 NM_029748 76799 Mm.293096 NM_029748 ENSMUSG00000028797 Tmem234 1500002D11Rik|2510006D16Rik|4933407D05Rik transmembrane protein 234 protein-coding common_peak2_289_2530_0.117889420466559_11.364436502344_2.2392771449126 chr1 155972188 155974675 + 2.2392771449126 NA promoter-TSS (NM_001039184) promoter-TSS (NM_001039184) -176 NM_001039184 74081 Mm.260247 NM_001039184 ENSMUSG00000033671 Cep350 4933409L06Rik|6430546F08Rik centrosomal protein 350 protein-coding common_peak2_70_400_0.285701119392098_8.79030898615097_2.23905928105823 chr15 76904058 76905204 + 2.23905928105823 NA exon (NM_012053, exon 3 of 6) exon (NM_012053, exon 3 of 6) 560 NM_012053 26961 Mm.30066 NM_012053 ENSMUSG00000003970 Rpl8 - ribosomal protein L8 protein-coding common_peak1_123_1105_-0.191228843127689_10.0155212486709_2.23894642033255 chr8 88361294 88362753 + 2.23894642033255 NA 5' UTR (NM_012047, exon 1 of 17) 5' UTR (NM_012047, exon 1 of 17) 168 NM_012047 26992 Mm.5400 NM_012047 ENSMUSG00000031660 Brd7 BP75|CELTIX1|Ptpn13ip bromodomain containing 7 protein-coding common_peak2_47_233_0.370023059695047_8.05537624943093_2.23883066665849 chrX 37190589 37191766 + 2.23883066665849 NA promoter-TSS (NM_019443) promoter-TSS (NM_019443) -45 NM_153503 69942 Mm.307182 NM_153503 ENSMUSG00000036537 Rnf113a1 2810428C21Rik|Rnf113a ring finger protein 113A1 protein-coding common_peak1_34_270_-0.400703326830337_7.8817973779387_2.23857120359963 chr2 79265568 79266115 + 2.23857120359963 NA intron (NM_010576, intron 2 of 27) intron (NM_010576, intron 2 of 27) 10415 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_147_1354_-0.17106886265711_10.3185427049127_2.23847856367366 chr9 57130051 57131724 + 2.23847856367366 NA exon (NM_028636, exon 1 of 26) exon (NM_028636, exon 1 of 26) 110 NM_028636 73744 Mm.30110 NM_028636 ENSMUSG00000032295 Man2c1 1110025H24Rik mannosidase, alpha, class 2C, member 1 protein-coding common_peak2_58_311_0.320124186179576_8.44546431195204_2.23840408916816 chr2 75638982 75640738 + 2.23840408916816 NA Intergenic MMVL30-int|LTR|ERV1 -19399 NM_146130 229279 Mm.316306 NM_053263 ENSMUSG00000059005 Hnrnpa3 2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3 heterogeneous nuclear ribonucleoprotein A3 protein-coding common_peak1_443_4348_0.090674796273337_12.1318053916007_2.23821519053116 chr4 108458898 108460771 + 2.23821519053116 NA intron (NM_175472, intron 1 of 30) CpG 408 NM_175472 230594 Mm.25181 NM_175472 ENSMUSG00000034610 Zcchc11 6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191 zinc finger, CCHC domain containing 11 protein-coding common_peak2_64_532_-0.28107720242628_8.91745312154604_2.23819631197387 chr11 11764291 11767553 + 2.23819631197387 NA intron (NM_001301866, intron 5 of 5) (TAGA)n|Simple_repeat|Simple_repeat 43040 NM_021891 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding common_peak1_126_869_0.197339103437955_9.86354114245507_2.23805622807523 chr14 47648804 47650133 + 2.23805622807523 NA intron (NM_001293635, intron 1 of 40) CpG 157 NM_001293635 16709 Mm.3110 NM_008477 ENSMUSG00000021843 Ktn1 - kinectin 1 protein-coding common_peak2_87_747_-0.233872094820974_9.42995841247715_2.23765401626718 chr4 98435634 98437788 + 2.23765401626718 NA intron (NM_172696, intron 11 of 43) intron (NM_172696, intron 11 of 43) 40885 NM_172696 12695 Mm.90218 NM_007704 ENSMUSG00000061859 Patj Cipp|Inadl PATJ, crumbs cell polarity complex component protein-coding common_peak2_340_3110_0.106900938327776_11.6566131486983_2.23764918363322 chr18 34505384 34507911 + 2.23764918363322 NA 5' UTR (NM_146084, exon 1 of 21) 5' UTR (NM_146084, exon 1 of 21) 176 NM_146084 225358 Mm.226899 NM_146084 ENSMUSG00000036501 Fam13b 2610024E20Rik|AW060714|AW546153 family with sequence similarity 13, member B protein-coding common_peak1_35_278_-0.392823638770164_7.92770949244411_2.23730443916367 chr10 80857474 80858131 + 2.23730443916367 NA intron (NM_175195, intron 1 of 14) intron (NM_175195, intron 1 of 14) 2527 NM_175195 73218 Mm.3285 NM_175195 ENSMUSG00000035206 Sppl2b 3110056O03Rik|AW550292|PSL1 signal peptide peptidase like 2B protein-coding common_peak1_117_1044_-0.197148510740064_9.93071297159821_2.23684319418829 chr9 66974664 66975743 + 2.23684319418829 NA exon (NM_030717, exon 1 of 6) exon (NM_030717, exon 1 of 6) 281 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding common_peak1_69_577_-0.266867656790788_9.04149185410528_2.23671195968136 chr12 21456709 21457976 + 2.23671195968136 NA Intergenic Intergenic -39906 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_185_1766_-0.14965729247767_10.7122576783128_2.23668823860513 chr6 83794058 83795957 + 2.23668823860513 NA promoter-TSS (NM_019542) promoter-TSS (NM_019542) -50 NM_019542 56174 Mm.190650 NM_019542 ENSMUSG00000034744 Nagk Gnk N-acetylglucosamine kinase protein-coding common_peak2_169_1271_0.165371203754493_10.3955685571616_2.23645385771654 chr18 74999826 75002207 + 2.23645385771654 NA promoter-TSS (NR_028552) promoter-TSS (NR_028552) -52 NR_028552 100217457 NR_028552 ENSMUSG00000064871 Snord58b MBII-199 small nucleolar RNA, C/D box 58B snoRNA common_peak2_147_1061_0.180440222779971_10.1427881621941_2.23629161131936 chr9 107974553 107976652 + 2.23629161131936 NA promoter-TSS (NM_023738) promoter-TSS (NM_023738) 35 NM_023738 74153 Mm.277125 NM_023738 ENSMUSG00000032596 Uba7 1300004C08Rik|Ube1l ubiquitin-like modifier activating enzyme 7 protein-coding common_peak2_240_2391_-0.128150178943455_11.1599265847264_2.2362594439934 chr18 12971445 12975009 + 2.2362594439934 NA intron (NM_008378, intron 1 of 10) (CTCGG)n|Simple_repeat|Simple_repeat 975 NM_008378 16210 Mm.8154 NM_008378 ENSMUSG00000024423 Impact E430016J11Rik impact, RWD domain protein protein-coding unique_peak2_25_198_-0.481203375902717_7.39602293259229_2.23577630992672 chr1 131445897 131447470 + 2.23577630992672 NA intron (NM_001081011, intron 2 of 22) intron (NM_001081011, intron 2 of 22) 80678 NM_001081011 14270 Mm.276259 NM_019520 ENSMUSG00000026425 Srgap2 9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3 SLIT-ROBO Rho GTPase activating protein 2 protein-coding common_peak1_25_198_-0.481203375902717_7.39602293259229_2.23577630992672 chrX 167207115 167207595 + 2.23577630992672 NA 3' UTR (NM_021278, exon 3 of 3) 3' UTR (NM_021278, exon 3 of 3) 1863 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_33_143_0.460223570718215_7.40003678680142_2.23577630992672 chr14 121315950 121316645 + 2.23577630992672 NA intron (NM_145465, intron 2 of 10) intron (NM_145465, intron 2 of 10) 62933 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_164_1536_-0.16047591515157_10.505663492115_2.2356046280487 chr13 37857065 37859158 + 2.2356046280487 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) -30323 NR_033218 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_111_736_0.214268563295567_9.63265509074285_2.23559672433384 chr7 45872692 45874042 + 2.23559672433384 NA intron (NM_133950, intron 1 of 4) intron (NM_133950, intron 1 of 4) 527 NM_133950 68137 Mm.298433 NM_133950 ENSMUSG00000002778 Kdelr1 8030486F04Rik|AW215843|Erd2.1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 protein-coding unique_peak2_46_372_-0.33990073282922_8.37308145384063_2.23557423082548 chrX 107095145 107097479 + 2.23557423082548 NA intron (NM_172435, intron 2 of 2) intron (NM_172435, intron 2 of 2) 6977 NM_172435 78826 Mm.74639 NM_172435 ENSMUSG00000050921 P2ry10 5830408N17Rik|Lypsr2|P2Y10 purinergic receptor P2Y, G-protein coupled 10 protein-coding common_peak1_46_372_-0.33990073282922_8.37308145384063_2.23557423082548-2 chr7 141901835 141902484 + 2.23557423082548 NA intron (NM_023764, intron 1 of 5) CpG 247 NM_023764 54473 Mm.103551 NM_023764 ENSMUSG00000025139 Tollip 4930403G24Rik|4931428G15Rik toll interacting protein protein-coding common_peak1_46_372_-0.33990073282922_8.37308145384063_2.23557423082548 chr10 81407935 81408666 + 2.23557423082548 NA intron (NM_026756, intron 4 of 8) intron (NM_026756, intron 4 of 8) 7997 NR_106141 102465778 NR_106141 ENSMUSG00000105379 Mir1191b mmu-mir-1191b microRNA 1191b ncRNA common_peak1_44_354_-0.345496576827413_8.29892692597834_2.23519628044081 chr1 132341972 132342572 + 2.23519628044081 NA Intergenic Intergenic 25676 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak1_45_363_-0.342721524918831_8.33643387773928_2.2350546101603 chr6 59425790 59426741 + 2.2350546101603 NA promoter-TSS (NM_183183) promoter-TSS (NM_183183) 25 NM_183183 243385 Mm.138080 NM_183183 ENSMUSG00000045441 Gprin3 C030038J10Rik|C730021L23 GPRIN family member 3 protein-coding common_peak2_56_459_-0.300991331394203_8.69499438524727_2.23479584045727 chr4 16163853 16164787 + 2.23479584045727 NA promoter-TSS (NM_138952) promoter-TSS (NM_138952) 210 NR_045765 100415915 Mm.387180 NR_045765 ENSMUSG00000085112 A530072M11Rik - RIKEN cDNA gene A530072M11 ncRNA common_peak2_63_522_-0.281189250749062_8.89007251087241_2.23464947215771 chr16 10411390 10412599 + 2.23464947215771 NA promoter-TSS (NM_011955) promoter-TSS (NM_011955) 56 NM_011955 26425 Mm.29037 NM_011955 ENSMUSG00000022503 Nubp1 - nucleotide binding protein 1 protein-coding common_peak1_277_2397_0.120981148564734_11.2881065176966_2.23319343896602 chr17 29006829 29008967 + 2.23319343896602 NA promoter-TSS (NM_134115) promoter-TSS (NM_134115) 39 NM_134115 106504 Mm.439986 NM_134115 ENSMUSG00000024006 Stk38 5830476G13Rik|9530097A09Rik|AA617404|Ndr1 serine/threonine kinase 38 protein-coding common_peak2_139_987_0.186303105311568_10.0415187842405_2.23305384073699 chr4 141209883 141211749 + 2.23305384073699 NA Intergenic Intergenic -3140 NM_001081174 76166 Mm.271064 NM_001081174 ENSMUSG00000073733 Rsg1 6330545A04Rik|Gm723 REM2 and RAB-like small GTPase 1 protein-coding common_peak1_26_205_-0.464292960343624_7.45435404701141_2.23278921344288 chr13 98124667 98125266 + 2.23278921344288 NA intron (NM_012026, intron 2 of 35) intron (NM_012026, intron 2 of 35) 81199 NM_012026 110596 Mm.252718 NM_012026 ENSMUSG00000021662 Arhgef28 9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF Rho guanine nucleotide exchange factor (GEF) 28 protein-coding common_peak2_34_149_0.452627024027653_7.45513220250971_2.23278921344288 chr5 120502996 120503631 + 2.23278921344288 NA exon (NM_023625, exon 1 of 12) exon (NM_023625, exon 1 of 12) 310 NM_023625 71772 Mm.100065 NM_023625 ENSMUSG00000029598 Plbd2 1300012G16Rik|AU019810|P76 phospholipase B domain containing 2 protein-coding common_peak1_78_661_-0.248588315693901_9.24639324896027_2.23167600059663 chr6 83101178 83102574 + 2.23167600059663 NA exon (NM_001081266, exon 1 of 9) exon (NM_001081266, exon 1 of 9) 360 NM_001081266 243510 Mm.436553 NM_001081266 ENSMUSG00000079511 Ccdc142 A230058J24Rik coiled-coil domain containing 142 protein-coding common_peak2_78_661_-0.248588315693901_9.24639324896027_2.23167600059663 chr13 70637209 70638593 + 2.23167600059663 NA promoter-TSS (NM_144837) promoter-TSS (NM_144837) -267 NM_144837 218333 Mm.139738 NM_144837 ENSMUSG00000034525 Ice1 C77245|mKIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding common_peak1_38_303_-0.374984063835725_8.06043548152572_2.23157331673231 chr11 100931254 100931936 + 2.23157331673231 NA intron (NM_213659, intron 1 of 23) intron (NM_213659, intron 1 of 23) 7945 NM_213660 20848 Mm.249934 NM_011486 ENSMUSG00000004040 Stat3 1110034C02Rik|AW109958|Aprf signal transducer and activator of transcription 3 protein-coding common_peak2_273_2353_0.122051262682772_11.2619242363798_2.23146116983425 chr3 79175965 79179388 + 2.23146116983425 NA Intergenic Intergenic -31801 NM_001099624 76089 Mm.31220 NM_001099624 ENSMUSG00000062232 Rapgef2 5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP Rap guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak2_35_155_0.445895454196775_7.50834994596064_2.23120855711875 chr12 116405279 116406256 + 2.23120855711875 NA promoter-TSS (NR_028421) promoter-TSS (NR_028421) 365 NM_133762 76044 Mm.491196 NM_133762 ENSMUSG00000042029 Ncapg2 5830426I05Rik|Luzp5|Mtb|mCAP-G2 non-SMC condensin II complex, subunit G2 protein-coding common_peak2_35_155_0.445895454196775_7.50834994596064_2.23120855711875-2 chr19 5433206 5434046 + 2.23120855711875 NA Intergenic Intergenic 8482 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak2_173_1634_-0.155664778533236_10.5972425311188_2.23093605828887 chr1 172147368 172149618 + 2.23093605828887 NA intron (NM_153555, intron 1 of 13) CpG 478 NM_153555 98193 Mm.159915 NM_153555 ENSMUSG00000026554 Dcaf8 AA408877|AA433120|AA792214|AU018973|C76055|D1Dau35e|D1Ucla4|H326|Wdr42a DDB1 and CUL4 associated factor 8 protein-coding unique_peak2_15_121_-0.634484074437719_6.61349530034403_2.23060001589935 chr2 38997857 38998641 + 2.23060001589935 NA promoter-TSS (NM_029687) promoter-TSS (NM_029687) -60 NM_029687 76646 Mm.358777 NM_029687 ENSMUSG00000035295 Wdr38 1700123D08Rik WD repeat domain 38 protein-coding common_peak1_15_121_-0.634484074437719_6.61349530034403_2.23060001589935 chr3 100489453 100489917 + 2.23060001589935 NA promoter-TSS (NM_001142952) promoter-TSS (NM_001142952) -493 NM_001142952 74645 Mm.226900 NM_001142952 ENSMUSG00000044468 Fam46c 4930431B09Rik|AI449797 family with sequence similarity 46, member C protein-coding common_peak1_74_431_0.275262206126198_8.89251860522657_2.23058310825474 chr12 16591294 16592346 + 2.23058310825474 NA Intergenic Intergenic -2050 NM_172950 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak2_37_295_-0.382476851045703_8.0182149401061_2.2300494614783 chr8 109862977 109864210 + 2.2300494614783 NA 3' UTR (NM_001301211, exon 23 of 23) 3' UTR (NM_001301211, exon 23 of 23) -5010 NM_001122594 244650 Mm.23494 NM_001122594 ENSMUSG00000031732 Phlpp2 AI481772|C130044A18Rik|Phlppl PH domain and leucine rich repeat protein phosphatase 2 protein-coding common_peak1_200_1580_0.148056563944635_10.7006499343307_2.22988355362409 chr4 150000388 150002691 + 2.22988355362409 NA intron (NM_173371, intron 1 of 4) intron (NM_173371, intron 1 of 4) 1697 NM_001291004 100198 Mm.22183 NM_173371 ENSMUSG00000028980 H6pd AI785303|G6pd1|Gpd-1|Gpd1 hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding common_peak2_86_737_-0.234679175394543_9.41013741836312_2.22942961720707 chr17 5016339 5018629 + 2.22942961720707 NA intron (NM_001085355, intron 1 of 19) intron (NM_001085355, intron 1 of 19) 22410 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_44_213_0.384711651163485_7.93382281198289_2.22938554658628 chr7 17025672 17026473 + 2.22938554658628 NA intron (NM_011155, intron 1 of 12) ID_B1|SINE|B4 1842 NM_011155 19060 Mm.3294 NM_011155 ENSMUSG00000003099 Ppp5c AU020526|PP5 protein phosphatase 5, catalytic subunit protein-coding common_peak1_44_213_0.384711651163485_7.93382281198289_2.22938554658628-2 chr9 62972061 62972902 + 2.22938554658628 NA intron (NM_019663, intron 1 of 13) intron (NM_019663, intron 1 of 13) 8398 NM_019663 56469 Mm.431253 NM_019663 ENSMUSG00000032405 Pias1 2900068C24Rik|Ddxbp1|GBP protein inhibitor of activated STAT 1 protein-coding common_peak2_82_699_-0.241705242663981_9.33035849050034_2.228971858115 chr16 44745298 44746841 + 2.228971858115 NA exon (NM_025332, exon 1 of 6) exon (NM_025332, exon 1 of 6) 294 NM_001159329 66067 Mm.34520 NM_025332 ENSMUSG00000022668 Gtpbp8 0610037H22Rik GTP-binding protein 8 (putative) protein-coding common_peak2_97_844_-0.219318983072506_9.61314803963329_2.22868048593804 chr17 32946604 32948432 + 2.22868048593804 NA promoter-TSS (NM_130882) promoter-TSS (NM_130882) -157 NM_130882 170716 Mm.254838 NM_130882 ENSMUSG00000024055 Cyp4f13 0610030I10Rik|Cypf13 cytochrome P450, family 4, subfamily f, polypeptide 13 protein-coding common_peak2_227_2240_-0.132203591587507_11.0638251377166_2.22865570577694 chr2 131261612 131264314 + 2.22865570577694 NA intron (NM_153501, intron 1 of 6) intron (NM_153501, intron 1 of 6) 463 NM_153501 74450 Mm.101264 NM_153501 ENSMUSG00000037514 Pank2 4933409I19Rik|AI642621 pantothenate kinase 2 protein-coding common_peak2_73_614_-0.258046637828835_9.13541928131218_2.22862374670236 chr11 115764821 115766273 + 2.22862374670236 NA 5' UTR (NM_028014, exon 1 of 32) 5' UTR (NM_028014, exon 1 of 32) 114 NM_028014 71947 Mm.23168 NM_028014 ENSMUSG00000020747 Tmem94 2310067B10Rik|Kiaa0195|mKIAA0195 transmembrane protein 94 protein-coding common_peak1_166_1243_0.165975835557356_10.3637586879093_2.22829459261399 chr6 85451400 85453050 + 2.22829459261399 NA promoter-TSS (NM_028505) promoter-TSS (NM_028505) -255 NR_028081 73327 Mm.379221 NM_028505 ENSMUSG00000030008 Pradc1 1700040I03Rik|Pap21 protease-associated domain containing 1 protein-coding common_peak2_455_4498_0.0889470015301974_12.1798621523441_2.22810654240867 chr14 70283059 70290700 + 2.22810654240867 NA intron (NM_001304992, intron 1 of 12) intron (NM_001304992, intron 1 of 12) 2618 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak1_113_1003_-0.200432523214241_9.87132729234365_2.22772008863807 chr5 100428963 100430462 + 2.22772008863807 NA promoter-TSS (NR_034038) promoter-TSS (NR_034038) -177 NR_034038 100503199 Mm.392282 NR_034038 ENSMUSG00000097772 5430416N02Rik 100041797|Adapt33|Gm3514 RIKEN cDNA 5430416N02 gene ncRNA common_peak1_25_97_0.540711400525724_6.88506554437807_2.22744252556355 chr15 75682246 75682847 + 2.22744252556355 NA Intergenic Intergenic -3756 NM_028404 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding unique_peak2_25_97_0.540711400525724_6.88506554437807_2.22744252556355 chr19 31199367 31200141 + 2.22744252556355 NA intron (NM_011160, intron 3 of 17) intron (NM_011160, intron 3 of 17) 16642 NR_002849 78103 Mm.445198 NR_002849 8430431K14Rik - RIKEN cDNA 8430431K14 gene ncRNA unique_peak2_18_143_-0.569560798045422_6.8851446024196_2.22744252556355 chr9 56209018 56210154 + 2.22744252556355 NA intron (NM_172924, intron 6 of 6) intron (NM_172924, intron 6 of 6) -48516 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak2_25_97_0.540711400525724_6.88506554437807_2.22744252556355-2 chr13 73733054 73733614 + 2.22744252556355 NA Intergenic Intergenic -30363 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak1_18_143_-0.569560798045422_6.8851446024196_2.22744252556355 chr19 12805447 12805891 + 2.22744252556355 NA intron (NM_134152, intron 2 of 8) L1_Mus3|LINE|L1 7060 NM_134152 107321 Mm.313136 NM_134152 ENSMUSG00000024696 Lpxn 4933402K05Rik|A530083L21Rik|AV278559|LDPL leupaxin protein-coding common_peak2_25_97_0.540711400525724_6.88506554437807_2.22744252556355-3 chr6 135361967 135362800 + 2.22744252556355 NA promoter-TSS (NM_010128) promoter-TSS (NM_010128) -548 NM_010128 13730 Mm.182785 NM_010128 ENSMUSG00000030208 Emp1 I-8-09|TMP epithelial membrane protein 1 protein-coding common_peak2_25_97_0.540711400525724_6.88506554437807_2.22744252556355 chr1 59923285 59924090 + 2.22744252556355 NA intron (NM_001037725, intron 1 of 7) B1_Mur4|SINE|Alu 10681 NM_001037725 72750 Mm.258250 NM_001037725 ENSMUSG00000041040 Fam117b 2810425F24Rik|6330416D14Rik|Als2cr13 family with sequence similarity 117, member B protein-coding common_peak1_18_143_-0.569560798045422_6.8851446024196_2.22744252556355-2 chr8 126971150 126971528 + 2.22744252556355 NA promoter-TSS (NM_172762) promoter-TSS (NM_172762) -260 NM_172762 52202 Mm.28199 NM_172762 ENSMUSG00000033931 Rbm34 4930547K05Rik|6330444B11|D8Ertd233e RNA binding motif protein 34 protein-coding common_peak2_146_1344_-0.172379704380019_10.307200605254_2.22721646729577 chr6 119371033 119375122 + 2.22721646729577 NA intron (NM_197985, intron 1 of 7) intron (NM_197985, intron 1 of 7) -42311 NM_172492 211187 Mm.121498 NM_172492 ENSMUSG00000055003 Lrtm2 A230084J22|AI841794 leucine-rich repeats and transmembrane domains 2 protein-coding unique_peak2_21_75_0.611870229250366_6.55386262806877_2.22710752786844 chr8 71288800 71289467 + 2.22710752786844 NA intron (NM_001142323, intron 1 of 38) intron (NM_001142323, intron 1 of 38) 16419 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding common_peak1_21_75_0.611870229250366_6.55386262806877_2.22710752786844 chr3 135603203 135603527 + 2.22710752786844 NA intron (NM_008689, intron 16 of 24) intron (NM_008689, intron 16 of 24) 88182 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak1_39_312_-0.372272308115486_8.10388269287488_2.22678983497798 chr2 130179393 130179939 + 2.22678983497798 NA promoter-TSS (NM_009225) promoter-TSS (NM_009225) -302 NM_009225 20638 Mm.88216 NM_009225 ENSMUSG00000027404 Snrpb AL024368|AU018828|SM-B|SM11|SMB|SNRNP-B small nuclear ribonucleoprotein B protein-coding unique_peak2_13_106_-0.681514547569576_6.40070971261636_2.22667690327212 chr1 170941251 170942280 + 2.22667690327212 NA Intergenic RLTR4_Mm|LTR|ERV1 -14182 NR_027666 98752 Mm.1850 NM_145141 ENSMUSG00000038421 Fcrla BB219290|FCRL|FCRL1|FREB|Fcrlm1|Fcrx|Freb1|mFREB|mFcrX Fc receptor-like A protein-coding unique_peak2_13_106_-0.681514547569576_6.40070971261636_2.22667690327212-3 chr2 128068501 128069223 + 2.22667690327212 NA intron (NM_028765, intron 14 of 17) L1ME1|LINE|L1 -57176 NM_207681 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding unique_peak2_13_106_-0.681514547569576_6.40070971261636_2.22667690327212-2 chr12 72535890 72536840 + 2.22667690327212 NA promoter-TSS (NM_026327) promoter-TSS (NM_026327) 8 NM_026327 67708 Mm.11233 NM_026327 ENSMUSG00000034501 Pcnx4 1810048J11Rik|4932413O10|AU017192|Pcnxl4 pecanex homolog 4 protein-coding common_peak2_90_559_0.24306202577508_9.25081402983251_2.22534102013708 chr5 115299889 115301654 + 2.22534102013708 NA promoter-TSS (NR_131932) promoter-TSS (NR_131932) 219 NM_019682 56455 Mm.256858 NM_019682 ENSMUSG00000009013 Dynll1 Dlc8|Dnclc1|Pin dynein light chain LC8-type 1 protein-coding common_peak2_54_441_-0.306611541005516_8.63459678888867_2.22463034500838 chr2 93186985 93189189 + 2.22463034500838 NA intron (NM_001025246, intron 1 of 7) CpG 503 NM_001025246 277414 Mm.41033 NM_001025246 ENSMUSG00000068735 Trp53i11 Tp53i11 transformation related protein 53 inducible protein 11 protein-coding common_peak1_306_2721_0.113739920396142_11.4673213117021_2.22450686317917 chr2 128125798 128128454 + 2.22450686317917 NA promoter-TSS (NM_001284410) promoter-TSS (NM_001284410) -449 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_97_617_0.232025520192666_9.38747578800071_2.22416199508426 chr19 27429234 27430938 + 2.22416199508426 NA promoter-TSS (NR_131940) promoter-TSS (NR_131940) 49 NR_027987 107372 Mm.17942 NM_175354 C030016D13Rik AW413347 RIKEN cDNA C030016D13 gene ncRNA common_peak2_42_200_0.394675479075023_7.84838943071644_2.2240408327182 chr2 38926021 38927288 + 2.2240408327182 NA promoter-TSS (NM_010264) promoter-TSS (NM_010264) -193 NM_010264 14536 Mm.439703 NM_010264 ENSMUSG00000063972 Nr6a1 1700113M01Rik|Gcnf|NCNF|RTR nuclear receptor subfamily 6, group A, member 1 protein-coding common_peak1_42_200_0.394675479075023_7.84838943071644_2.2240408327182 chr15 64213311 64213963 + 2.2240408327182 NA intron (NM_001276462, intron 1 of 27) MTC|LTR|ERVL-MaLR 99036 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_38_174_0.421732337775532_7.66207728072009_2.22400152104325 chr19 5741421 5742565 + 2.22400152104325 NA 5' UTR (NM_008520, exon 2 of 28) 5' UTR (NM_008520, exon 2 of 28) 1089 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding common_peak2_82_494_0.258221154201376_9.08039529206766_2.22397821042629 chr1 161130581 161131845 + 2.22397821042629 NA intron (NM_001039482, intron 1 of 11) intron (NM_001039482, intron 1 of 11) 266 NM_001039482 226541 Mm.255165 NM_144876 ENSMUSG00000026705 Klhl20 AI504637|D930050H05Rik|Kleip|mKIAA4210 kelch-like 20 protein-coding common_peak1_26_102_0.535707039656376_6.95435404701141_2.22342632872707-2 chr15 99457414 99457847 + 2.22342632872707 NA intron (NM_001001884, intron 1 of 12) CpG 118 NM_001001884 380969 Mm.22915 NM_001001884 ENSMUSG00000023009 Nckap5l C230021P08Rik|Cep169 NCK-associated protein 5-like protein-coding common_peak1_26_102_0.535707039656376_6.95435404701141_2.22342632872707 chr1 106617449 106617923 + 2.22342632872707 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -71055 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_148_1364_-0.169760233699593_10.3298051189574_2.22342478432299 chr5 110769732 110770914 + 2.22342478432299 NA intron (NM_173066, intron 1 of 50) CpG 394 NM_029337 75560 Mm.270487 NM_029337 ENSMUSG00000029505 Ep400 1700020J09Rik|AU023439|mDomino|mKIAA1498|p400 E1A binding protein p400 protein-coding common_peak1_55_289_0.333267971189347_8.34654307560961_2.22317183909249 chr6 54041745 54042777 + 2.22317183909249 NA intron (NM_001163640, intron 1 of 12) intron (NM_001163640, intron 1 of 12) 2329 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak1_43_207_0.385970335739215_7.8934248860107_2.22229040001936 chr16 44360854 44361776 + 2.22229040001936 NA intron (NM_144550, intron 4 of 17) B1_Mur3|SINE|Alu 13914 NM_144550 212514 Mm.24035 NM_144550 ENSMUSG00000043065 Spice1 Ccdc52|D16Ertd480e spindle and centriole associated protein 1 protein-coding common_peak1_40_187_0.406854413387788_7.75801605837153_2.22201663321987 chr5 108433844 108434550 + 2.22201663321987 NA intron (NM_007507, intron 1 of 3) CpG-11302 181 NM_007507 11958 Mm.136093 NM_007507 ENSMUSG00000050856 Atp5k 2610008D24Rik|Atp5i|Lfm1 ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit E protein-coding common_peak1_103_903_-0.211533095401544_9.71441241471442_2.22196390152143 chr4 152177395 152178896 + 2.22196390152143 NA promoter-TSS (NM_133348) promoter-TSS (NM_133348) 45 NM_133348 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak1_37_168_0.426097078301062_7.61392797543272_2.22185442326865 chr3 85195007 85195521 + 2.22185442326865 NA Intergenic RMER6B|LTR|ERVK -122255 NR_040542 73283 Mm.489084 NR_040542 ENSMUSG00000099995 1700036G14Rik - RIKEN cDNA 1700036G14 gene ncRNA common_peak1_37_168_0.426097078301062_7.61392797543272_2.22185442326865-2 chr8 11202642 11203377 + 2.22185442326865 NA intron (NM_009931, intron 49 of 51) intron (NM_009931, intron 49 of 51) -109796 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak1_37_168_0.426097078301062_7.61392797543272_2.22185442326865-3 chr8 46830374 46831290 + 2.22185442326865 NA intron (NM_008391, intron 6 of 8) intron (NM_008391, intron 6 of 8) 91087 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_85_727_-0.235455158758391_9.3900670608195_2.22129602794275 chr8 25098959 25100585 + 2.22129602794275 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 2039 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak1_89_766_-0.230291818751946_9.46793685812696_2.22125975722226 chr4 46534268 46535316 + 2.22125975722226 NA intron (NM_029077, intron 1 of 5) intron (NM_029077, intron 1 of 5) 1349 NM_029077 74735 Mm.240252 NM_029077 ENSMUSG00000039853 Trim14 5830400N10Rik|pub tripartite motif-containing 14 protein-coding common_peak1_36_162_0.431055496980333_7.56425590272124_2.22070584382359 chr16 97462072 97462665 + 2.22070584382359 NA intron (NM_010846, intron 1 of 10) intron (NM_010846, intron 1 of 10) 537 NM_010846 17857 Mm.33996 NM_010846 ENSMUSG00000000386 Mx1 AI893580|Mx|Mx-1 MX dynamin-like GTPase 1 protein-coding unique_peak2_36_162_0.431055496980333_7.56425590272124_2.22070584382359 chr3 69113970 69115512 + 2.22070584382359 NA intron (NM_008467, intron 1 of 16) intron (NM_008467, intron 1 of 16) 12351 NM_008467 16649 Mm.30601 NM_008467 ENSMUSG00000027782 Kpna4 1110058D08Rik|IPOA3 karyopherin (importin) alpha 4 protein-coding unique_peak2_61_504_-0.286845061718495_8.83671704677991_2.22011626505481 chr16 24506088 24508677 + 2.22011626505481 NA intron (NM_001145952, intron 2 of 11) intron (NM_001145952, intron 2 of 11) -21932 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak2_53_432_-0.309403336700774_8.60352154637634_2.22005178385761 chr1 20819584 20820582 + 2.22005178385761 NA intron (NM_008563, intron 1 of 16) CpG 130 NM_008563 17215 Mm.4502 NM_008563 ENSMUSG00000041859 Mcm3 AL033361|C80350|Mcmd|P1|p1.m minichromosome maintenance complex component 3 protein-coding common_peak2_53_432_-0.309403336700774_8.60352154637634_2.22005178385761-2 chr6 148895449 148896968 + 2.22005178385761 NA promoter-TSS (NM_181541) promoter-TSS (NM_181541) 29 NM_001301351 232560 Mm.150568 NM_181541 ENSMUSG00000030309 Caprin2 C1qdc1|Eeg1|rng140 caprin family member 2 protein-coding common_peak1_188_1459_0.153991022337687_10.5887481649362_2.21950521441191 chr2 30415102 30416703 + 2.21950521441191 NA promoter-TSS (NM_138748) promoter-TSS (NM_138748) -148 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding common_peak2_72_605_-0.260854957087323_9.11274650492929_2.21919888072495 chr15 65725558 65728245 + 2.21919888072495 NA Intergenic Intergenic -60140 NM_133766 76740 Mm.260647 NM_133766 ENSMUSG00000015002 Efr3a A130089M23Rik|BB071175|C76891|C920006C10Rik|D030063F01Rik|mKIAA0143 EFR3 homolog A protein-coding common_peak1_72_605_-0.260854957087323_9.11274650492929_2.21919888072495 chr4 155162686 155163797 + 2.21919888072495 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 59294 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_41_194_0.396756641235244_7.80570863436723_2.21828595576585-2 chr7 4058860 4059833 + 2.21828595576585 NA intron (NM_001302675, intron 1 of 6) MMETn-int|LTR|ERVK 3858 NM_001302677 52855 Mm.290880 NM_178611 ENSMUSG00000055541 Lair1 5133400O11Rik|BB115266|D7Bwg0421e|Lair-1 leukocyte-associated Ig-like receptor 1 protein-coding common_peak2_41_194_0.396756641235244_7.80570863436723_2.21828595576585 chr10 41385445 41386539 + 2.21828595576585 NA Intergenic L1MEc|LINE|L1 -64366 NM_001277229 268294 Mm.258475 NM_153398 ENSMUSG00000019826 Zbtb24 BC055367|Bif1|Bsg1|ZNF450 zinc finger and BTB domain containing 24 protein-coding common_peak2_153_1119_0.174050835014455_10.2163084344522_2.21808504475736 chr5 103912605 103915515 + 2.21808504475736 NA Intergenic Intergenic -2831 NM_178741 246293 Mm.179871 NM_178741 ENSMUSG00000029312 Klhl8 2310001P09Rik|D5Ertd431e kelch-like 8 protein-coding common_peak2_345_3170_0.105100680575068_11.6832725023914_2.21790423445658 chr3 95014154 95017210 + 2.21790423445658 NA promoter-TSS (NM_030074) promoter-TSS (NM_030074) -444 NM_030074 78266 Mm.389478 NM_030074 ENSMUSG00000019338 Zfp687 4931408L03Rik|Znf687|mKIAA1441 zinc finger protein 687 protein-coding common_peak1_39_181_0.409951898618436_7.71277058950791_2.2178833804719 chr7 4059073 4059812 + 2.2178833804719 NA intron (NM_001302675, intron 1 of 6) MMETn-int|LTR|ERVK 3762 NM_001302677 52855 Mm.290880 NM_178611 ENSMUSG00000055541 Lair1 5133400O11Rik|BB115266|D7Bwg0421e|Lair-1 leukocyte-associated Ig-like receptor 1 protein-coding common_peak2_39_181_0.409951898618436_7.71277058950791_2.2178833804719 chr14 8517301 8518425 + 2.2178833804719 NA exon (NM_028934, exon 9 of 16) exon (NM_028934, exon 9 of 16) -139100 NM_146050 18300 Mm.25351 NM_146050 ENSMUSG00000021749 Oit1 2310076N21Rik|AV067083|EF-7|Fam3d oncoprotein induced transcript 1 protein-coding common_peak1_457_4524_0.0883781290865979_12.1878911414012_2.21736849623873 chr1 178335704 178338914 + 2.21736849623873 NA exon (NM_016805, exon 1 of 14) exon (NM_016805, exon 1 of 14) 475 NM_016805 51810 Mm.86589 NM_016805 ENSMUSG00000039630 Hnrnpu AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U heterogeneous nuclear ribonucleoprotein U protein-coding common_peak1_54_282_0.336632775554033_8.3129746306089_2.21695055984291 chr15 81190142 81190751 + 2.21695055984291 NA promoter-TSS (NR_015603) promoter-TSS (NR_015603) 311 NM_001082536 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak2_54_282_0.336632775554033_8.3129746306089_2.21695055984291 chr5 127610606 127612166 + 2.21695055984291 NA intron (NM_133895, intron 1 of 7) ID_B1|SINE|B4 6006 NM_133895 100561 Mm.28506 NM_133895 ENSMUSG00000029416 Slc15a4 AA987064|AW742963|C130069N12Rik|PHT1|PTR4 solute carrier family 15, member 4 protein-coding common_peak2_54_282_0.336632775554033_8.3129746306089_2.21695055984291-3 chr8 72302923 72304320 + 2.21695055984291 NA Intergenic Intergenic -15441 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak2_54_282_0.336632775554033_8.3129746306089_2.21695055984291-2 chr6 31130774 31132138 + 2.21695055984291 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -68363 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_106_693_0.220178566777513_9.54888113596702_2.21614552199894 chr7 127911753 127912947 + 2.21614552199894 NA promoter-TSS (NM_026370) promoter-TSS (NM_026370) -167 NM_026370 67773 Mm.425492 NM_026370 ENSMUSG00000030801 Kat8 2010203C02Rik|5830450F21Rik|D7Ertd629e|MOF|Myst1 K(lysine) acetyltransferase 8 protein-coding common_peak2_203_1611_0.146259370972201_10.7277657140141_2.21614495869937 chr18 24204763 24207213 + 2.21614495869937 NA promoter-TSS (NM_001160404) promoter-TSS (NM_001160404) -6 NM_001160404 14423 Mm.30249 NM_013814 ENSMUSG00000000420 Galnt1 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 protein-coding common_peak1_169_1589_-0.156556891132871_10.5565326046053_2.21552379503705 chr14 27248660 27250799 + 2.21552379503705 NA intron (NM_027871, intron 1 of 10) URR1A|DNA|hAT-Charlie 11719 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_15_46_0.74166441144753_5.9254210574014_2.21542829695182-2 chr3 115758060 115758435 + 2.21542829695182 NA Intergenic Intergenic -43192 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding common_peak1_15_46_0.74166441144753_5.9254210574014_2.21542829695182-3 chr4 135947098 135947495 + 2.21542829695182 NA intron (NM_008254, intron 1 of 8) intron (NM_008254, intron 1 of 8) 843 NM_008254 15356 Mm.482102 NM_008254 ENSMUSG00000028672 Hmgcl AW476067|HL 3-hydroxy-3-methylglutaryl-Coenzyme A lyase protein-coding common_peak1_15_46_0.74166441144753_5.9254210574014_2.21542829695182-4 chr8 120780848 120781277 + 2.21542829695182 NA Intergenic Intergenic 42423 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_15_46_0.74166441144753_5.9254210574014_2.21542829695182 chr2 34912973 34913320 + 2.21542829695182 NA intron (NM_028716, intron 1 of 14) intron (NM_028716, intron 1 of 14) 830 NM_028716 74016 Mm.65691 NM_028716 ENSMUSG00000026873 Phf19 3110009G19Rik|3321402G02Rik PHD finger protein 19 protein-coding unique_peak1_15_46_0.74166441144753_5.9254210574014_2.21542829695182 chr17 25971114 25971552 + 2.21542829695182 NA Intergenic B1_Mus1|SINE|Alu -5828 NM_015830 50817 Mm.216072 NM_015830 ENSMUSG00000037326 Capn15 Solh calpain 15 protein-coding common_peak2_85_518_0.252748753082424_9.14596510489909_2.21501378086513 chr11 117076285 117077799 + 2.21501378086513 NA promoter-TSS (NR_105853) promoter-TSS (NR_105853) 259 NR_027059 76972 Mm.309167 NR_027059 ENSMUSG00000086859 Snhg20 2810008D09Rik small nucleolar RNA host gene 20 ncRNA common_peak1_81_486_0.260277614169441_9.05791676916706_2.21492277825573 chr15 76756817 76757872 + 2.21492277825573 NA intron (NM_198420, intron 2 of 10) intron (NM_198420, intron 2 of 10) -33499 NM_176828 223665 Mm.291713 NM_145472 ENSMUSG00000033707 C030006K11Rik 1110033I13Rik RIKEN cDNA C030006K11 gene protein-coding common_peak2_76_642_-0.251953386554881_9.20269823405051_2.21474591862693 chr4 41712843 41714221 + 2.21474591862693 NA promoter-TSS (NM_027278) promoter-TSS (NM_027278) -15 NM_027278 69961 Mm.425182 NM_027278 ENSMUSG00000036114 Rpp25l 2810432D09Rik|AW987258|Rppl25 ribonuclease P/MRP 25 subunit-like protein-coding common_peak2_60_495_-0.289676859339902_8.80935788071692_2.21316252123282 chr16 62846274 62847778 + 2.21316252123282 NA promoter-TSS (NM_026577) promoter-TSS (NM_026577) 14 NM_026577 68146 Mm.96833 NM_026577 ENSMUSG00000022911 Arl13b A530097K21Rik|A930014M17Rik|Arl2l1|C530009C10Rik|hnn ADP-ribosylation factor-like 13B protein-coding common_peak2_7_63_-0.930359048061188_5.53482047596941_2.21281914625673 chr9 55326941 55327403 + 2.21281914625673 NA intron (NM_172923, intron 1 of 10) intron (NM_172923, intron 1 of 10) 223 NM_172923 244886 Mm.24361 NM_172923 ENSMUSG00000032313 Tmem266 9630029F15|AI118078|HVRP1 transmembrane protein 266 protein-coding unique_peak2_7_63_-0.930359048061188_5.53482047596941_2.21281914625673 chrX 124282335 124282842 + 2.21281914625673 NA Intergenic MMVL30-int|LTR|ERV1 -146678 NM_001100616 100038941 Mm.388852 NM_001100616 ENSMUSG00000072049 Vmn2r121 EG625699 vomeronasal 2, receptor 121 protein-coding common_peak1_18_60_0.669626865834004_6.26555077047989_2.21242713350372-3 chr2 173449122 173449610 + 2.21242713350372 NA Intergenic Intergenic -73226 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding common_peak1_18_60_0.669626865834004_6.26555077047989_2.21242713350372-2 chr2 65190581 65191016 + 2.21242713350372 NA intron (NM_177025, intron 1 of 13) intron (NM_177025, intron 1 of 13) 47828 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak1_18_60_0.669626865834004_6.26555077047989_2.21242713350372 chr16 38549722 38550131 + 2.21242713350372 NA intron (NM_001300827, intron 1 of 10) intron (NM_001300827, intron 1 of 10) 330 NM_172380 224143 Mm.284366 NM_172380 ENSMUSG00000034064 Poglut1 9630046K23Rik|Clp46|Ktelc1|Rumi protein O-glucosyltransferase 1 protein-coding unique_peak1_18_60_0.669626865834004_6.26555077047989_2.21242713350372 chr1 173424600 173425020 + 2.21242713350372 NA intron (NM_001013779, intron 1 of 8) B4A|SINE|B4 4206 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_18_60_0.669626865834004_6.26555077047989_2.21242713350372-4 chr9 41106221 41106706 + 2.21242713350372 NA intron (NM_176860, intron 1 of 13) L3|LINE|CR1 51031 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak2_22_174_-0.512750307738819_7.19483595796292_2.21217116887261 chr1 7708943 7709804 + 2.21217116887261 NA Intergenic MMVL30-int|LTR|ERV1 620453 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding common_peak1_22_174_-0.512750307738819_7.19483595796292_2.21217116887261-2 chr2 164850148 164850576 + 2.21217116887261 NA intron (NM_011125, intron 8 of 15) B3|SINE|B2 7346 NM_011125 18830 Mm.6105 NM_011125 ENSMUSG00000017754 Pltp Bpife|OD107 phospholipid transfer protein protein-coding common_peak1_22_174_-0.512750307738819_7.19483595796292_2.21217116887261 chr10 130542140 130542770 + 2.21217116887261 NA Intergenic Intergenic -45076 NM_001103366 625131 Mm.469844 NM_001103366 ENSMUSG00000091511 Vmn2r87 EG625131 vomeronasal 2, receptor 87 protein-coding common_peak1_72_416_0.278415452940965_8.84311129991515_2.21176384807144 chrX 36597582 36598726 + 2.21176384807144 NA promoter-TSS (NM_016783) promoter-TSS (NM_016783) -39 NM_016783 53328 Mm.9052 NM_016783 ENSMUSG00000006373 Pgrmc1 AA415812|HPR6.6|PPMR|Vema progesterone receptor membrane component 1 protein-coding common_peak2_67_378_0.290706845175791_8.71140746075899_2.21174861796712-2 chr2 33129823 33132067 + 2.21174861796712 NA Intergenic Intergenic -43741 NM_178888 99326 Mm.41290 NM_178888 ENSMUSG00000038860 Garnl3 AW120551 GTPase activating RANGAP domain-like 3 protein-coding common_peak2_67_378_0.290706845175791_8.71140746075899_2.21174861796712 chr17 45685507 45686994 + 2.21174861796712 NA promoter-TSS (NM_026732) promoter-TSS (NM_026732) -32 NM_198167 224807 Mm.157904 NM_198167 ENSMUSG00000036026 Tmem63b BC026370 transmembrane protein 63b protein-coding common_peak1_123_1104_-0.189923827171775_10.0148687406929_2.21145475478625 chr18 37926028 37927817 + 2.21145475478625 NA intron (NM_001305981, intron 1 of 28) intron (NM_001305981, intron 1 of 28) 8501 NM_001305980 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding common_peak2_53_275_0.340295421247783_8.27867216740206_2.21112814023161 chr9 57831063 57832420 + 2.21112814023161 NA intron (NM_019689, intron 1 of 7) intron (NM_019689, intron 1 of 7) 2493 NM_019689 56380 Mm.425588 NM_019689 ENSMUSG00000004661 Arid3b Bdp|Dri2 AT rich interactive domain 3B (BRIGHT-like) protein-coding common_peak1_28_221_-0.445752551837538_7.57153959043134_2.21063017575557 chr15 96376937 96377602 + 2.21063017575557 NA intron (NM_175251, intron 15 of 20) ID_B1|SINE|B4 83574 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak1_257_2589_-0.122262384980328_11.2776051900838_2.21046999181598 chr3 135422494 135424607 + 2.21046999181598 NA promoter-TSS (NM_025902) promoter-TSS (NM_025902) -117 NM_025902 67006 Mm.269993 NM_025902 ENSMUSG00000028165 Cisd2 1500009M05Rik|1500026J14Rik|1500031D15Rik|AI848398|B630006A20Rik|Miner1|Naf-1|Noxp70|Zcd2 CDGSH iron sulfur domain 2 protein-coding common_peak1_159_1481_-0.162358571115989_10.4521504467478_2.21021379424881 chr5 73292415 73293577 + 2.21021379424881 NA intron (NM_001159887, intron 1 of 7) CpG 202 NM_001159888 68095 Mm.247039 NM_023429 ENSMUSG00000029152 Ociad1 6030432N09Rik|AI481327|AW557942|Asrij|B230209J16Rik|BB021357|Emi2|Imi2|OCIA|TPA018 OCIA domain containing 1 protein-coding common_peak1_324_3398_-0.105874539330456_11.6779573768764_2.20927835068548 chr5 34335676 34337695 + 2.20927835068548 NA promoter-TSS (NM_001304270) promoter-TSS (NM_001304270) -247 NM_001304270 19822 Mm.21281 NM_011278 ENSMUSG00000029110 Rnf4 AU018689|Gtrgeo8|SNURF ring finger protein 4 protein-coding common_peak2_217_1755_0.140277417180634_10.8482158381257_2.20844557784742 chr1 152007397 152011525 + 2.20844557784742 NA intron (NM_197990, intron 1 of 5) Tigger7|DNA|TcMar-Tigger 80859 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak1_75_632_-0.252472863658738_9.17982525759897_2.20809089241572 chr16 49818154 49819345 + 2.20809089241572 NA Intergenic MTD|LTR|ERVL-MaLR -36905 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_19_150_-0.547270511694302_6.96476948347793_2.20805004415418 chr8 40610111 40610555 + 2.20805004415418 NA intron (NM_001040699, intron 1 of 13) IAPLTR2a|LTR|ERVK 24459 NM_001040699 54384 Mm.294871 NM_019433 ENSMUSG00000039431 Mtmr7 - myotubularin related protein 7 protein-coding common_peak1_142_1016_0.182086382724927_10.08114715522_2.20800878820945 chr5 135535543 135537366 + 2.20800878820945 NA intron (NM_146001, intron 1 of 30) B3|SINE|B2 8668 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak2_280_2431_0.119663973757476_11.3077595003223_2.20727909281457 chr17 45733433 45737734 + 2.20727909281457 NA Intergenic Intergenic -1739 NM_028164 72240 Mm.482897 NM_028164 ENSMUSG00000094690 1600014C23Rik - RIKEN cDNA 1600014C23 gene protein-coding common_peak1_13_37_0.812024925387985_5.65393997613758_2.20715782907905 chr17 4979893 4980289 + 2.20715782907905 NA Intergenic Intergenic -14983 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding unique_peak1_13_37_0.812024925387985_5.65393997613758_2.20715782907905-2 chr2 121866490 121866822 + 2.20715782907905 NA promoter-TSS (NM_199038) promoter-TSS (NM_199038) -314 NM_199038 319996 Mm.292109 NM_177054 ENSMUSG00000060227 Casc4 D130060C09Rik|VGFG2573 cancer susceptibility candidate 4 protein-coding unique_peak1_13_37_0.812024925387985_5.65393997613758_2.20715782907905 chr11 120489487 120489834 + 2.20715782907905 NA TTS (NM_027204) TTS (NM_027204) -2177 NM_013770 27376 Mm.3991 NM_013770 ENSMUSG00000025792 Slc25a10 Dic solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10 protein-coding common_peak2_200_1581_0.147144331830214_10.7011060503879_2.2069378857614 chr2 174601046 174604265 + 2.2069378857614 NA Intergenic Intergenic -40879 NM_001099328 100043757 Mm.48711 NM_001099328 ENSMUSG00000050600 Zfp831 ENSMUSG00000050600|OTTMUSG00000017459 zinc finger protein 831 protein-coding common_peak1_51_415_-0.318406162313805_8.54123663698419_2.20689534166624 chr4 129188637 129189686 + 2.20689534166624 NA promoter-TSS (NM_134151) promoter-TSS (NM_134151) 321 NM_029036 74648 Mm.172064 NM_029036 ENSMUSG00000040928 S100pbp 4930429A08Rik|AI851343|S100pbpr S100P binding protein protein-coding common_peak2_98_853_-0.216637795806326_9.62977336171733_2.20678995421573 chr5 62857325 62859805 + 2.20678995421573 NA intron (NM_001170705, intron 7 of 8) intron (NM_001170705, intron 7 of 8) 44742 NM_001170705 100322896 Mm.479821 NM_001170705 ENSMUSG00000090326 Dthd1 Gm17384 death domain containing 1 protein-coding common_peak1_171_1292_0.162445232816408_10.4177291762185_2.20674395246893 chr11 50024873 50026179 + 2.20674395246893 NA exon (NM_001290750, exon 1 of 8) exon (NM_001290750, exon 1 of 8) 195 NM_001290750 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak1_66_370_0.295268323528921_8.68290953838526_2.20609224853474 chr2 120567095 120568492 + 2.20609224853474 NA 5' UTR (NM_009222, exon 1 of 8) 5' UTR (NM_009222, exon 1 of 8) 122 NM_009222 20619 Mm.245715 NM_009222 ENSMUSG00000027287 Snap23 23kDa|AA408749|SNAP-23|Sndt|Syndet synaptosomal-associated protein 23 protein-coding common_peak2_202_1601_0.146540991369328_10.7189289280934_2.20585196318187 chr12 28749645 28752567 + 2.20585196318187 NA promoter-TSS (NM_178811) promoter-TSS (NM_178811) -653 NM_178811 217449 Mm.132006 NM_178811 ENSMUSG00000020628 Trappc12 CGI-87|D930014A20Rik|Ttc15 trafficking protein particle complex 12 protein-coding common_peak1_366_3924_-0.0983822057195294_11.8892858358066_2.20576962406837 chr5 149050619 149053204 + 2.20576962406837 NA promoter-TSS (NM_001313894) promoter-TSS (NM_001313894) -295 NM_001313894 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding common_peak2_101_882_-0.211986539334653_9.68027635798114_2.2047422068622 chr11 88203451 88205282 + 2.2047422068622 NA promoter-TSS (NM_024174) promoter-TSS (NM_024174) -22 NM_024174 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding common_peak1_101_882_-0.211986539334653_9.68027635798114_2.2047422068622 chr4 108619191 108620518 + 2.2047422068622 NA promoter-TSS (NM_177045) promoter-TSS (NM_177045) -102 NM_177045 319965 Mm.151129 NM_177045 ENSMUSG00000028582 Cc2d1b A830039B04Rik|Freud2 coiled-coil and C2 domain containing 1B protein-coding common_peak2_71_408_0.28195295130363_8.81693350859356_2.20468363199505 chr19 8251530 8252944 + 2.20468363199505 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -33398 NM_172776 236293 Mm.440581 NM_172776 ENSMUSG00000075044 Slc22a29 D630002G06Rik solute carrier family 22. member 29 protein-coding unique_peak2_23_181_-0.494019172106602_7.2607850541454_2.20409824279907 chr8 57575697 57576970 + 2.20409824279907 NA intron (NM_144731, intron 2 of 11) Tigger9a|DNA|TcMar-Tigger 64490 NM_008252 97165 Mm.276881 NM_008252 ENSMUSG00000054717 Hmgb2 C80539|HMG-2|Hmg2 high mobility group box 2 protein-coding common_peak1_29_229_-0.436833618346672_7.62707324177104_2.20245497672089 chr9 21246017 21246543 + 2.20245497672089 NA intron (NM_053190, intron 1 of 2) intron (NM_053190, intron 1 of 2) 2163 NM_053190 94226 Mm.190619 NM_053190 ENSMUSG00000045087 S1pr5 Edg8|S1P5|lpB4 sphingosine-1-phosphate receptor 5 protein-coding common_peak1_117_790_0.20460483175539_9.72983630035049_2.2016134066592 chr11 52003425 52004847 + 2.2016134066592 NA promoter-TSS (NM_001166654) promoter-TSS (NM_001166654) -85 NM_001166657 213084 Mm.280557 NM_153785 ENSMUSG00000020389 Cdkl3 AI852479|B230379H01Rik cyclin-dependent kinase-like 3 protein-coding common_peak1_117_790_0.20460483175539_9.72983630035049_2.2016134066592-2 chr14 67842047 67844055 + 2.2016134066592 NA intron (NM_177780, intron 6 of 51) intron (NM_177780, intron 6 of 51) 16694 NR_105857 102465310 NR_105857 ENSMUSG00000098866 Mir6539 Gm27464|mir-6539|mmu-mir-6539 microRNA 6539 ncRNA common_peak1_94_814_-0.222186458843229_9.55956301969683_2.20092676222718 chr16 91931053 91932220 + 2.20092676222718 NA promoter-TSS (NM_138597) promoter-TSS (NM_138597) -6 NM_138597 28080 Mm.41 NM_138597 ENSMUSG00000022956 Atp5o ATPO|D12Wsu28e|OSCP ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit protein-coding common_peak1_285_2487_0.11803188763818_11.3397867139497_2.20088035760502 chr9 44984396 44986746 + 2.20088035760502 NA intron (NM_013487, intron 2 of 4) intron (NM_013487, intron 2 of 4) 3785 NM_013487 12500 Mm.4527 NM_013487 ENSMUSG00000032094 Cd3d T3d CD3 antigen, delta polypeptide protein-coding common_peak2_210_1683_0.142922916072568_10.7891378811027_2.20083903368932 chr10 80140405 80143984 + 2.20083903368932 NA promoter-TSS (NM_025313) promoter-TSS (NM_025313) -121 NM_025313 66043 Mm.278560 NM_025313 ENSMUSG00000003072 Atp5d 0610008F14Rik|1500000I11Rik|AA960090|AI876556|AU020773|C85518 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit protein-coding common_peak1_303_3140_-0.11019477950965_11.5619108378971_2.20018001419768 chr9 63724408 63728515 + 2.20018001419768 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 31533 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_58_477_-0.295340402938923_8.75319660651129_2.19994226693066 chr16 98081334 98082998 + 2.19994226693066 NA intron (NR_015491, intron 1 of 4) intron (NR_015491, intron 1 of 4) 273 NR_015491 320586 Mm.442230 NR_015491 A630089N07Rik - RIKEN cDNA A630089N07 gene ncRNA common_peak2_168_1263_0.164033100352308_10.3857972983533_2.19948712337014 chr1 138257774 138259977 + 2.19948712337014 NA Intergenic Intergenic -14863 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_264_2256_0.123656649129599_11.2020190277566_2.19947904131154 chr9 79792009 79796029 + 2.19947904131154 NA promoter-TSS (NM_133718) promoter-TSS (NM_133718) 378 NR_040734 74633 Mm.262175 NR_040734 ENSMUSG00000086918 4930429F24Rik - RIKEN cDNA 4930429F24 gene ncRNA common_peak2_172_1621_-0.154347572724724_10.5863843178549_2.1993921526915 chr7 30649078 30651188 + 2.1993921526915 NA promoter-TSS (NM_133693) promoter-TSS (NM_133693) 95 NM_133693 68035 Mm.401747 NM_133693 ENSMUSG00000036733 Rbm42 1700003D06Rik|3100004P22Rik RNA binding motif protein 42 protein-coding common_peak1_16_128_-0.607690994449082_6.70738175819871_2.19904834028285 chr19 18621841 18622212 + 2.19904834028285 NA intron (NM_017375, intron 1 of 9) Lx3A|LINE|L1 9787 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak2_148_1363_-0.168702926916552_10.3292764655659_2.19876980018598 chr14 47297616 47299563 + 2.19876980018598 NA intron (NM_178684, intron 1 of 3) CpG 275 NM_178684 218975 Mm.212297 NM_178684 ENSMUSG00000021840 Mapk1ip1l 9130202B12|C130032J12Rik mitogen-activated protein kinase 1 interacting protein 1-like protein-coding common_peak2_153_1417_-0.166307965280094_10.3864878345995_2.19806935155587 chr2 160951004 160954375 + 2.19806935155587 NA intron (NM_173368, intron 36 of 36) B1_Mus2|SINE|Alu -40350 NM_182840 280635 Mm.330747 NM_182840 ENSMUSG00000050700 Emilin3 1110013O17Rik|EMILIN-3|EMILIN-5|EMILIN-T|Emilin5 elastin microfibril interfacer 3 protein-coding common_peak2_48_388_-0.326750108075508_8.44025129094844_2.19771659733335 chr12 51855857 51857683 + 2.19771659733335 NA Intergenic URR1A|DNA|hAT-Charlie -27234 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak2_156_1148_0.171312551759536_10.2518193585259_2.19761971187425 chr4 87982950 87986423 + 2.19761971187425 NA intron (NM_027326, intron 2 of 10) intron (NM_027326, intron 2 of 10) 48721 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak2_177_1351_0.158751243668361_10.4802550581164_2.19740219571515 chr10 62791207 62793510 + 2.19740219571515 NA promoter-TSS (NM_026201) promoter-TSS (NM_026201) 10 NM_026201 67500 Mm.196371 NM_026201 ENSMUSG00000020074 Ccar1 2610511G16Rik|9430036H15Rik|Carp1 cell division cycle and apoptosis regulator 1 protein-coding common_peak2_97_843_-0.217610640610145_9.61229386840211_2.19732674147233 chr5 31712742 31715125 + 2.19732674147233 NA intron (NM_181281, intron 2 of 10) Lx8|LINE|L1 15883 NM_181282 107976 Mm.482126 NM_144541 ENSMUSG00000052139 Bre 6030405P19Rik|AI429776|B830038C02Rik brain and reproductive organ-expressed protein protein-coding common_peak2_448_4413_0.0890887398629179_12.1524152842111_2.19729451686464 chr9 64809730 64816197 + 2.19729451686464 NA intron (NM_001162917, intron 2 of 34) intron (NM_001162917, intron 2 of 34) 1952 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak2_78_660_-0.246407370394376_9.2453027763105_2.19624218214076 chr11 120315428 120317181 + 2.19624218214076 NA Intergenic Intergenic 31109 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA common_peak1_65_363_0.29613761864854_8.65586344952297_2.19602891986717 chr17 46681099 46681785 + 2.19602891986717 NA promoter-TSS (NM_027910) promoter-TSS (NM_027910) 262 NM_001277312 17256 Mm.329083 NM_010787 ENSMUSG00000002768 Mea1 Mea-1 male enhanced antigen 1 protein-coding common_peak1_47_379_-0.329467829052495_8.4051216938047_2.19563118118734 chr2 35299510 35300557 + 2.19563118118734 NA intron (NM_146120, intron 10 of 16) intron (NM_146120, intron 10 of 16) 17653 NM_146120 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak2_59_319_0.313340648896698_8.47859841933571_2.19499285349422 chr1 135313025 135314420 + 2.19499285349422 NA promoter-TSS (NM_011590) promoter-TSS (NM_011590) 15 NM_011590 21854 Mm.2368 NM_011590 ENSMUSG00000062580 Timm17a 17kDa|mTim17a translocase of inner mitochondrial membrane 17a protein-coding unique_peak2_10_84_-0.776205504630106_6.02128818382265_2.19496667975223-3 chr19 6969308 6969871 + 2.19496667975223 NA exon (NM_008874, exon 1 of 31) exon (NM_008874, exon 1 of 31) 225 NM_008874 18797 Mm.273204 NM_008874 ENSMUSG00000024960 Plcb3 mKIAA4098 phospholipase C, beta 3 protein-coding unique_peak2_10_84_-0.776205504630106_6.02128818382265_2.19496667975223-2 chr14 47377311 47377876 + 2.19496667975223 NA intron (NM_001145953, intron 1 of 5) intron (NM_001145953, intron 1 of 5) 3733 NM_001145953 16854 Mm.248615 NM_010705 ENSMUSG00000050335 Lgals3 GBP|L-34|Mac-2|gal3 lectin, galactose binding, soluble 3 protein-coding unique_peak2_10_84_-0.776205504630106_6.02128818382265_2.19496667975223-5 chr9 117373268 117374064 + 2.19496667975223 NA intron (NM_001172121, intron 1 of 14) MLT1E|LTR|ERVL-MaLR -121183 NM_001172126 207181 Mm.326411 NM_178660 ENSMUSG00000039607 Rbms3 6720477E09Rik|8430436O14Rik RNA binding motif, single stranded interacting protein protein-coding unique_peak2_10_84_-0.776205504630106_6.02128818382265_2.19496667975223-4 chr2 167314668 167315357 + 2.19496667975223 NA intron (NM_019835, intron 1 of 8) intron (NM_019835, intron 1 of 8) 34166 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding unique_peak2_10_84_-0.776205504630106_6.02128818382265_2.19496667975223 chr11 21222525 21223191 + 2.19496667975223 NA Intergenic Intergenic -16174 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak2_250_2105_0.127507759788282_11.1040436009199_2.19496596733145 chr8 13286541 13288818 + 2.19496596733145 NA promoter-TSS (NM_172282) promoter-TSS (NM_172282) -334 NM_172282 234076 Mm.219813 NM_172282 ENSMUSG00000038497 Tmco3 B230339H12Rik|C87304 transmembrane and coiled-coil domains 3 protein-coding common_peak1_70_401_0.282107854668089_8.79210561851297_2.19354575477823 chr4 62661905 62663016 + 2.19354575477823 NA intron (NM_134257, intron 10 of 15) intron (NM_134257, intron 10 of 15) -11514 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_70_401_0.282107854668089_8.79210561851297_2.19354575477823 chr2 38286435 38287807 + 2.19354575477823 NA exon (NM_146122, exon 1 of 22) exon (NM_146122, exon 1 of 22) 263 NM_146122 227801 Mm.314245 NM_146122 ENSMUSG00000035392 Dennd1a 6030446I19Rik|connecdenn DENN/MADD domain containing 1A protein-coding common_peak2_351_3241_0.103578611921835_11.7144576814785_2.19272509748058 chr3 152209014 152212651 + 2.19272509748058 NA promoter-TSS (NM_027287) promoter-TSS (NM_027287) 374 NM_057172 51886 Mm.278922 NM_057172 ENSMUSG00000028034 Fubp1 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4 far upstream element (FUSE) binding protein 1 protein-coding common_peak1_22_81_0.580908799475426_6.6480064043558_2.19221019244939-2 chr11 53775540 53776058 + 2.19221019244939 NA intron (NM_001159396, intron 8 of 9) intron (NM_001159396, intron 8 of 9) 5326 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_22_81_0.580908799475426_6.6480064043558_2.19221019244939 chr1 181881305 181881836 + 2.19221019244939 NA Intergenic Intergenic -39169 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_22_81_0.580908799475426_6.6480064043558_2.19221019244939-3 chr19 12595706 12596116 + 2.19221019244939 NA intron (NR_015503, intron 1 of 1) CpG 655 NR_015503 74333 Mm.329744 NR_015503 ENSMUSG00000086213 A330040F15Rik - RIKEN cDNA A330040F15 gene ncRNA common_peak1_22_81_0.580908799475426_6.6480064043558_2.19221019244939 chr10 21202584 21203099 + 2.19221019244939 NA Intergenic Intergenic -41857 NM_010848 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding common_peak2_132_1196_-0.181307124281142_10.1345538748029_2.19216303627673 chr4 149759885 149762824 + 2.19216303627673 NA intron (NM_027460, intron 2 of 6) intron (NM_027460, intron 2 of 6) 12913 NM_027460 70556 Mm.41877 NM_027460 ENSMUSG00000028982 Slc25a33 5730438N18Rik|Pnc1 solute carrier family 25, member 33 protein-coding common_peak1_93_804_-0.223101574389604_9.54129418580718_2.19178668591912 chr12 82244055 82245366 + 2.19178668591912 NA intron (NM_001167983, intron 2 of 23) L1M4c|LINE|L1 -66639 NM_172579 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak2_121_1083_-0.191017279120542_9.9866404017936_2.19176395903233 chr5 76904400 76906356 + 2.19176395903233 NA intron (NM_173765, intron 1 of 15) CpG 136 NM_173765 231326 Mm.39271 NM_173765 ENSMUSG00000055923 Aasdh A230062G08Rik|A830035E16|Acsf4|U26 aminoadipate-semialdehyde dehydrogenase protein-coding common_peak2_207_1653_0.143514659028725_10.7635008486856_2.1909989389059 chr11 50024070 50027294 + 2.1909989389059 NA intron (NM_001290749, intron 1 of 7) CpG 351 NM_001290750 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak2_31_245_-0.419648931027716_7.73269003982538_2.19088989133057 chr8 126867852 126868673 + 2.19088989133057 NA Intergenic B4|SINE|B4 77659 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak1_241_2400_-0.126240532408612_11.1662994220261_2.18986223144474 chr1 136130825 136133249 + 2.18986223144474 NA promoter-TSS (NR_046170) promoter-TSS (NR_046170) 636 NM_001039472 16565 Mm.276135 NM_019962 ENSMUSG00000041642 Kif21b 2610511N21Rik|mKIAA0449 kinesin family member 21B protein-coding common_peak1_68_567_-0.267151799257887_9.01617121987574_2.18985932620036 chr4 125130979 125132356 + 2.18985932620036 NA Intergenic Intergenic -3786 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak2_50_255_0.347670777127457_8.17383538856373_2.1898081904616 chr7 16452113 16453556 + 2.1898081904616 NA promoter-TSS (NM_026938) promoter-TSS (NM_026938) 55 NM_026938 69094 Mm.29633 NM_026938 ENSMUSG00000019158 Tmem160 1810008O21Rik transmembrane protein 160 protein-coding common_peak2_50_255_0.347670777127457_8.17383538856373_2.1898081904616-2 chr7 123396889 123398306 + 2.1898081904616 NA intron (NM_025304, intron 1 of 10) intron (NM_025304, intron 1 of 10) 19615 NM_025304 30949 Mm.260527 NM_025304 ENSMUSG00000030763 Lcmt1 AL033290|LCMT-1|Lcmt leucine carboxyl methyltransferase 1 protein-coding common_peak1_50_255_0.347670777127457_8.17383538856373_2.1898081904616 chr10 127211089 127211754 + 2.1898081904616 NA exon (NM_054097, exon 1 of 10) exon (NM_054097, exon 1 of 10) 201 NM_054097 117150 Mm.22682 NM_054097 ENSMUSG00000025417 Pip4k2c Pip5k2c phosphatidylinositol-5-phosphate 4-kinase, type II, gamma protein-coding common_peak1_137_1248_-0.177350130174807_10.1978826965206_2.18933487349541 chr17 7944972 7946425 + 2.18933487349541 NA promoter-TSS (NM_025789) promoter-TSS (NM_025789) 84 NM_025789 66832 Mm.29830 NM_025789 ENSMUSG00000073471 Rsph3a 1700012G05Rik|4930524H12Rik|R74860|Rshl2|Rshl2a radial spoke 3A homolog (Chlamydomonas) protein-coding common_peak1_89_765_-0.228409633173969_9.46699576533797_2.18841998528608 chr1 144248074 144249088 + 2.18841998528608 NA intron (NM_015811, intron 1 of 4) intron (NM_015811, intron 1 of 4) 523 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak2_96_833_-0.218565210081254_9.59462096840404_2.18791189654984 chr11 4703508 4705476 + 2.18791189654984 NA promoter-TSS (NM_197979) promoter-TSS (NM_197979) -148 NM_197979 66152 Mm.269736 NM_197979 ENSMUSG00000059534 Uqcr10 1110020P15Rik|AA960494|Ucrc ubiquinol-cytochrome c reductase, complex III subunit X protein-coding common_peak1_206_1998_-0.138332920344549_10.8958962965724_2.18763657042441 chr7 67421016 67423382 + 2.18763657042441 NA Intergenic Intergenic -49341 NM_001291195 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak1_97_618_0.229692948882777_9.38864207365565_2.18759124447859 chr4 56801709 56802984 + 2.18759124447859 NA promoter-TSS (NM_026079) promoter-TSS (NM_026079) -15 NM_026079 230233 Mm.282743 NM_026079 ENSMUSG00000028431 Ikbkap 3110040G09Rik|6030413P05|C78473|Elp1|IKAP inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein protein-coding common_peak1_427_4154_0.0915622800707769_12.0664139016931_2.18734836442608 chr13 59768399 59771474 + 2.18734836442608 NA promoter-TSS (NR_015349) promoter-TSS (NR_015349) -30 NR_015349 13996 Mm.490435 NR_015349 ENSMUSG00000089875 Etohd2 AW491659 ethanol decreased 2 ncRNA common_peak1_45_362_-0.338752622715885_8.33444942663781_2.18729585380983 chr9 108560383 108561068 + 2.18729585380983 NA TTS (NM_001114119) TTS (NM_001114119) 224 NM_011830 23918 Mm.6065 NM_011830 ENSMUSG00000062867 Impdh2 IMPD inosine 5'-phosphate dehydrogenase 2 protein-coding common_peak2_58_312_0.315507558109207_8.44777262598722_2.18686431074437 chr2 35416064 35417863 + 2.18686431074437 NA intron (NM_001308299, intron 4 of 7) intron (NM_001308299, intron 4 of 7) -19789 NM_001272040 74854 Mm.159338 NM_001080709 ENSMUSG00000079421 4930402F06Rik - RIKEN cDNA 4930402F06 gene protein-coding unique_peak1_58_312_0.315507558109207_8.44777262598722_2.18686431074437 chr9 88553130 88553561 + 2.18686431074437 NA intron (NM_001142943, intron 2 of 5) 7SLRNA|srpRNA|srpRNA 5325 NM_001163061 71640 Mm.259988 NM_001142943 ENSMUSG00000032425 Zfp949 4930422I07Rik zinc finger protein 949 protein-coding common_peak1_58_312_0.315507558109207_8.44777262598722_2.18686431074437 chr19 46717623 46718797 + 2.18686431074437 NA intron (NM_020577, intron 7 of 10) RMER6C|LTR|ERVK 10767 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak1_69_393_0.286006206253514_8.76505492258313_2.18684769318182 chr8 69208602 69209617 + 2.18684769318182 NA promoter-TSS (NM_001013379) promoter-TSS (NM_001013379) 63 NM_001013379 234358 Mm.334577 NM_001013379 ENSMUSG00000059897 Zfp930 - zinc finger protein 930 protein-coding common_peak2_44_353_-0.341426912518365_8.29689209382381_2.18683749606776 chr2 117249502 117250685 + 2.18683749606776 NA intron (NM_026620, intron 1 of 7) CpG 354 NM_026620 68215 Mm.219389 NM_026620 ENSMUSG00000027349 Fam98b 2610510H03Rik family with sequence similarity 98, member B protein-coding common_peak1_44_353_-0.341426912518365_8.29689209382381_2.18683749606776 chr5 105061872 105062670 + 2.18683749606776 NA Intergenic Intergenic -8710 NM_029509 76074 Mm.458519 NM_029509 ENSMUSG00000034438 Gbp8 5830443L24Rik|mGBP8 guanylate-binding protein 8 protein-coding unique_peak2_24_189_-0.483840416194564_7.32793540023367_2.18625879541649 chr5 3433012 3434047 + 2.18625879541649 NA intron (NM_009873, intron 4 of 7) intron (NM_009873, intron 4 of 7) 89636 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak1_24_189_-0.483840416194564_7.32793540023367_2.18625879541649 chr13 49652299 49652769 + 2.18625879541649 NA promoter-TSS (NR_073168) promoter-TSS (NR_073168) 197 NM_025495 66336 Mm.440323 NM_025495 ENSMUSG00000021391 Cenpp 1700022C02Rik|4921518G09Rik centromere protein P protein-coding unique_peak2_24_189_-0.483840416194564_7.32793540023367_2.18625879541649-2 chrX 42188440 42189740 + 2.18625879541649 NA intron (NM_021465, intron 1 of 32) L1MA5A|LINE|L1 -12765 NM_001290713 20843 Mm.290422 NM_021465 ENSMUSG00000025862 Stag2 9230105L23Rik|B230112I07Rik|SA-2|SAP2 stromal antigen 2 protein-coding common_peak1_24_189_-0.483840416194564_7.32793540023367_2.18625879541649-3 chr6 128972311 128972965 + 2.18625879541649 NA intron (NM_001316752, intron 1 of 5) intron (NM_001316752, intron 1 of 5) 1478 NM_001168223 70809 Mm.439891 NM_027562 ENSMUSG00000000248 Clec2g 4632413B12Rik|Clr-c|Clr-d|Clrc|Clrd|Clrx|Ddv10|Ocilrp1 C-type lectin domain family 2, member g protein-coding common_peak1_24_189_-0.483840416194564_7.32793540023367_2.18625879541649-2 chr2 165213945 165214454 + 2.18625879541649 NA intron (NM_174988, intron 1 of 11) L2c|LINE|L2 20538 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak2_126_1134_-0.186265888004232_10.0553436381762_2.18615366771161 chr2 92203772 92206759 + 2.18615366771161 NA intron (NM_001109691, intron 2 of 18) intron (NM_001109691, intron 2 of 18) 13288 NR_035480 100316756 NR_035480 ENSMUSG00000088639 Mir1955 mir-1955|mmu-mir-1955 microRNA 1955 ncRNA common_peak1_77_651_-0.24917239343686_9.22414195751265_2.18597019628487 chr19 4203021 4204303 + 2.18597019628487 NA Intergenic PB1D11|SINE|Alu -2059 NM_011237 19367 Mm.277629 NM_011237 ENSMUSG00000024824 Rad9a Rad9 RAD9 checkpoint clamp component A protein-coding common_peak2_100_643_0.22593131549084_9.44388253586004_2.18513268313386 chr7 45915773 45918058 + 2.18513268313386 NA 3' UTR (NM_144801, exon 8 of 8) 3' UTR (NM_144801, exon 8 of 8) 3934 NM_001146346 13732 Mm.20829 NM_010129 ENSMUSG00000040212 Emp3 H-4|H4|HNMP-1|MI-35|Ymp epithelial membrane protein 3 protein-coding unique_peak2_33_261_-0.403274429376923_7.83178578684899_2.18465543090302 chr15 100460691 100462367 + 2.18465543090302 NA Intergenic Intergenic -7505 NM_134093 68614 Mm.275272 NM_134093 ENSMUSG00000037353 Letmd1 1110019O13Rik|AI593524|BB130465|BB235638|HCCR-2|HCCR1|MCC-32|Mccr LETM1 domain containing 1 protein-coding common_peak1_33_261_-0.403274429376923_7.83178578684899_2.18465543090302 chr5 107698492 107699243 + 2.18465543090302 NA non-coding (NR_045871, exon 3 of 3) non-coding (NR_045871, exon 3 of 3) 4613 NR_045871 654809 Mm.399159 NR_045871 ENSMUSG00000106333 4930428O21Rik - RIKEN cDNA 4930428O21 gene ncRNA common_peak1_139_1268_-0.17480601694486_10.2220733453687_2.18459558904683 chr9 44880165 44881360 + 2.18459558904683 NA intron (NM_001081049, intron 1 of 35) intron (NM_001081049, intron 1 of 35) 512 NM_001081049 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak1_57_304_0.322610193248677_8.41397052907459_2.18452070265174 chr4 152039084 152040206 + 2.18452070265174 NA exon (NM_001159599, exon 1 of 12) exon (NM_001159599, exon 1 of 12) 324 NM_028727 74035 Mm.275803 NM_028727 ENSMUSG00000028948 Nol9 4632412I24Rik|6030462G04Rik|AI449622|AW490720 nucleolar protein 9 protein-coding common_peak1_19_65_0.646740108272323_6.36776417349462_2.18371226368621-4 chr17 26531390 26531799 + 2.18371226368621 NA Intergenic B1F1|SINE|Alu -23122 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_19_65_0.646740108272323_6.36776417349462_2.18371226368621-3 chr14 47567902 47568276 + 2.18371226368621 NA intron (NM_172599, intron 1 of 9) intron (NM_172599, intron 1 of 9) 345 NM_172599 100504663 Mm.287279 NM_172599 ENSMUSG00000037526 Atg14 4832427M01|Atg14L|D14Ertd114e|D14Ertd436e autophagy related 14 protein-coding common_peak1_19_65_0.646740108272323_6.36776417349462_2.18371226368621-6 chr2 167629180 167629630 + 2.18371226368621 NA intron (NM_001311131, intron 1 of 4) intron (NM_001311131, intron 1 of 4) 2600 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak1_19_65_0.646740108272323_6.36776417349462_2.18371226368621-5 chr2 132251908 132252385 + 2.18371226368621 NA intron (NM_011045, intron 1 of 5) intron (NM_011045, intron 1 of 5) 1034 NM_011045 18538 Mm.7141 NM_011045 ENSMUSG00000027342 Pcna - proliferating cell nuclear antigen protein-coding common_peak1_19_65_0.646740108272323_6.36776417349462_2.18371226368621 chr11 5297120 5297554 + 2.18371226368621 NA intron (NM_001080924, intron 2 of 8) intron (NM_001080924, intron 2 of 8) -35727 NM_032396 84035 Mm.209989 NM_032396 ENSMUSG00000020393 Kremen1 AV002070|Kremen|Krm1 kringle containing transmembrane protein 1 protein-coding unique_peak2_19_65_0.646740108272323_6.36776417349462_2.18371226368621 chr4 139218947 139219684 + 2.18371226368621 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 25204 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_19_65_0.646740108272323_6.36776417349462_2.18371226368621 chr8 120114078 120114602 + 2.18371226368621 NA intron (NM_172286, intron 1 of 12) CpG 188 NM_001163761 234797 Mm.101958 NM_172286 ENSMUSG00000031824 6430548M08Rik AW049007|Kiaa0513|mKIAA0513 RIKEN cDNA 6430548M08 gene protein-coding common_peak1_19_65_0.646740108272323_6.36776417349462_2.18371226368621-8 chr7 126482599 126482998 + 2.18371226368621 NA Intergenic Intergenic -4557 NM_172745 233870 Mm.197829 NM_172745 ENSMUSG00000073838 Tufm 2300002G02Rik|C76308|C76389|EF-TuMT|EFTU Tu translation elongation factor, mitochondrial protein-coding common_peak1_19_65_0.646740108272323_6.36776417349462_2.18371226368621-2 chr12 110493945 110494374 + 2.18371226368621 NA intron (NM_012023, intron 1 of 13) Charlie1a|DNA|hAT-Charlie 8420 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_19_65_0.646740108272323_6.36776417349462_2.18371226368621-7 chr6 48667754 48668191 + 2.18371226368621 NA Intergenic Intergenic -8163 NM_174960 317758 Mm.116971 NM_174960 ENSMUSG00000051124 Gimap9 A630002K24|BB145400 GTPase, IMAP family member 9 protein-coding unique_peak1_19_65_0.646740108272323_6.36776417349462_2.18371226368621 chr6 54770292 54770811 + 2.18371226368621 NA Intergenic MLT1J|LTR|ERVL-MaLR -46365 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_14_113_-0.650845892753393_6.50746706778804_2.18363446705171-2 chr4 62663066 62663417 + 2.18363446705171 NA intron (NM_134257, intron 10 of 15) intron (NM_134257, intron 10 of 15) -10733 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_14_113_-0.650845892753393_6.50746706778804_2.18363446705171 chr10 118797569 118797967 + 2.18363446705171 NA Intergenic Intergenic 71135 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding unique_peak2_14_113_-0.650845892753393_6.50746706778804_2.18363446705171 chr10 61290175 61290933 + 2.18363446705171 NA Intergenic Intergenic -7282 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak1_309_2758_0.11147036144571_11.4856649220761_2.1831059959871 chr8 80738033 80740476 + 2.1831059959871 NA 5' UTR (NM_053124, exon 1 of 24) 5' UTR (NM_053124, exon 1 of 24) 205 NM_053124 93762 Mm.246803 NM_053124 ENSMUSG00000031715 Smarca5 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding common_peak2_144_1321_-0.171737560116803_10.2826376814493_2.18281487157603 chr3 130690714 130692541 + 2.18281487157603 NA Intergenic MLT1G3|LTR|ERVL-MaLR 17817 NM_025509 66357 Mm.300697 NM_025509 ENSMUSG00000041084 Ostc 2310008M10Rik|5730557H03Rik oligosaccharyltransferase complex subunit (non-catalytic) protein-coding common_peak2_35_277_-0.387643399664483_7.92511937289127_2.18276431164801-2 chr9 89704250 89705547 + 2.18276431164801 NA exon (NM_025360, exon 1 of 3) exon (NM_025360, exon 1 of 3) 145 NM_025360 66111 Mm.27606 NM_025360 ENSMUSG00000032353 Tmed3 1200002G13Rik|AW546672|P24b transmembrane p24 trafficking protein 3 protein-coding common_peak2_35_277_-0.387643399664483_7.92511937289127_2.18276431164801 chr5 23787475 23788444 + 2.18276431164801 NA intron (NM_001310467, intron 1 of 13) CpG 248 NM_001310467 72772 Mm.133300 NM_177323 ENSMUSG00000028999 Rint1 1500019C06Rik|2810450M21Rik|Rint-1 RAD50 interactor 1 protein-coding common_peak1_35_277_-0.387643399664483_7.92511937289127_2.18276431164801 chr9 4375805 4376470 + 2.18276431164801 NA Intergenic Intergenic -7400 NM_145609 78100 Mm.206549 NM_145609 ENSMUSG00000041124 Msantd4 8430410K20Rik|Mysantd4 Myb/SANT-like DNA-binding domain containing 4 with coiled-coils protein-coding common_peak2_29_120_0.489793195323108_7.16375983493615_2.18237550754288 chr10 7831925 7832656 + 2.18237550754288 NA promoter-TSS (NM_172785) promoter-TSS (NM_172785) -180 NM_172785 237256 Mm.140055 NM_172785 ENSMUSG00000039981 Zc3h12d D730019B10Rik|TFL zinc finger CCCH type containing 12D protein-coding common_peak1_72_604_-0.258472305776328_9.11155517927379_2.18229117759516 chr6 72938050 72938884 + 2.18229117759516 NA Intergenic Intergenic 19765 NM_001039392 19240 Mm.3532 NM_025284 ENSMUSG00000079523 Tmsb10 Ptmb10|Tb10 thymosin, beta 10 protein-coding common_peak2_157_1158_0.170046551293201_10.2636881266531_2.18219463427961 chr9 66881423 66884821 + 2.18219463427961 NA intron (NM_173413, intron 1 of 7) PB1D10|SINE|Alu 36583 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak2_220_2157_-0.132937973439011_11.0090101627685_2.18210462084942 chr8 91079924 91083626 + 2.18210462084942 NA intron (NM_001282000, intron 4 of 20) intron (NM_001282000, intron 4 of 20) 11718 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 retinoblastoma-like 2 protein-coding common_peak1_106_694_0.218101251744903_9.54991979348332_2.1816966169383 chr10 78243996 78245336 + 2.1816966169383 NA promoter-TSS (NM_001081055) promoter-TSS (NM_001081055) -24 NM_001081055 216131 Mm.27539 NM_001081055 ENSMUSG00000000374 Trappc10 B230307C21Rik|Gm870|Tmem1 trafficking protein particle complex 10 protein-coding common_peak2_171_1293_0.161329890634155_10.4182868473096_2.18153318670688 chr6 129816966 129820701 + 2.18153318670688 NA Intergenic Intergenic -42984 NM_001014997 232415 Mm.290598 NM_001014997 ENSMUSG00000071158 Gm156 Klrh1 predicted gene 156 protein-coding common_peak2_54_440_-0.303343827171606_8.63296293197172_2.18138519313053 chr10 117803731 117805532 + 2.18138519313053 NA Intergenic Intergenic -11926 NM_134010 103468 Mm.12568 NM_134010 ENSMUSG00000052798 Nup107 AW541137|C76801 nucleoporin 107 protein-coding common_peak1_23_86_0.570831972243367_6.72835948197041_2.1811496171148 chr3 107076273 107076916 + 2.1811496171148 NA Intergenic Intergenic -24973 NM_008417 16490 Mm.39285 NM_008417 ENSMUSG00000040724 Kcna2 Akr6a4|ENSMUSG00000074335|Gm10672|Kca1-2|Kv1.2|Mk-2 potassium voltage-gated channel, shaker-related subfamily, member 2 protein-coding common_peak2_67_558_-0.269943589496307_8.99173267809504_2.18109604262116 chr3 97158032 97159833 + 2.18109604262116 NA 5' UTR (NM_019800, exon 1 of 10) 5' UTR (NM_019800, exon 1 of 10) 155 NM_019800 66659 Mm.101368 NM_019800 ENSMUSG00000028093 Acp6 5730559A09Rik|ACPL1|AU022842|mPACPL1 acid phosphatase 6, lysophosphatidic protein-coding common_peak1_114_1011_-0.196427183722481_9.88477998283307_2.18088932495974 chrX 74269770 74270759 + 2.18088932495974 NA promoter-TSS (NM_052835) promoter-TSS (NM_052835) -552 NM_052835 110954 Mm.100113 NM_052835 ENSMUSG00000008682 Rpl10 D0HXS648|DXHXS648|DXHXS648E|QM|QM16 ribosomal protein L10 protein-coding common_peak2_112_746_0.210555065383163_9.65024196548082_2.18070139976996 chrX 160501596 160503082 + 2.18070139976996 NA promoter-TSS (NM_001177878) promoter-TSS (NM_001177878) -95 NM_172783 110094 Mm.350712 NM_172783 ENSMUSG00000031295 Phka2 6330505C01Rik|D330034O08|Phk phosphorylase kinase alpha 2 protein-coding common_peak2_137_971_0.18439512782737_10.0170100675195_2.18051355786155 chr12 3571643 3573315 + 2.18051355786155 NA promoter-TSS (NM_007886) promoter-TSS (NM_007886) 88 NR_027870 13528 Mm.286202 NM_007886 ENSMUSG00000071454 Dtnb - dystrobrevin, beta protein-coding common_peak2_111_981_-0.199789841924055_9.83968429335266_2.18019164249947 chr11 62666100 62669029 + 2.18019164249947 NA Intergenic MTE2a|LTR|ERVL-MaLR 18900 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding unique_peak2_40_319_-0.360484829821936_8.14168567997639_2.17907817102557 chr17 3140067 3142253 + 2.17907817102557 NA intron (NM_134123, intron 1 of 19) intron (NM_134123, intron 1 of 19) 26188 NM_134123 106583 Mm.124373 NM_134123 ENSMUSG00000046201 Scaf8 A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116 SR-related CTD-associated factor 8 protein-coding common_peak2_40_319_-0.360484829821936_8.14168567997639_2.17907817102557 chr3 89195709 89196803 + 2.17907817102557 NA Intergenic Intergenic -6669 NM_001077411 14466 Mm.5031 NM_008094 ENSMUSG00000028048 Gba GBA1|GC|GCase|GLUC|betaGC glucosidase, beta, acid protein-coding unique_peak2_20_158_-0.535408311485858_7.04517879954143_2.17795914009907 chr12 65258555 65259781 + 2.17795914009907 NA Intergenic Intergenic 33651 NM_027614 70948 Mm.219475 NM_027614 ENSMUSG00000035560 Wdr20rt 4921538B03Rik|4930427E19Rik|Wdr20|Wdr20b WD repeat domain 20, retrogene protein-coding common_peak1_20_158_-0.535408311485858_7.04517879954143_2.17795914009907 chr13 51775946 51776404 + 2.17795914009907 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 17572 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_20_158_-0.535408311485858_7.04517879954143_2.17795914009907-3 chr18 38406481 38406882 + 2.17795914009907 NA Intergenic Intergenic -12294 NM_022996 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding common_peak1_20_158_-0.535408311485858_7.04517879954143_2.17795914009907-2 chr13 93761424 93761951 + 2.17795914009907 NA Intergenic ID4_|SINE|ID -9992 NM_009712 11881 Mm.300178 NM_009712 ENSMUSG00000042082 Arsb 1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B protein-coding common_peak1_173_1313_0.159660581529879_10.4395798510873_2.17793285296983 chr1 134361126 134362707 + 2.17793285296983 NA promoter-TSS (NM_001042485) promoter-TSS (NM_001042485) 83 NM_001042485 57439 Mm.393140 NM_020588 ENSMUSG00000042305 Tmem183a 1300007B12Rik|1700020N19Rik|Tmem183 transmembrane protein 183A protein-coding common_peak1_256_2170_0.125457638541532_11.1468728298859_2.1775711056208 chr4 148626002 148627653 + 2.1775711056208 NA non-coding (NR_027864, exon 1 of 8) non-coding (NR_027864, exon 1 of 8) 169 NR_027864 230908 Mm.22453 NM_145556 ENSMUSG00000041459 Tardbp 1190002A23Rik|C85084|TDP-43|Tdp43 TAR DNA binding protein protein-coding unique_peak2_41_328_-0.357856818750387_8.18301536436005_2.17682923459069 chr3 137859681 137861632 + 2.17682923459069 NA Intergenic Intergenic -3831 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak1_41_328_-0.357856818750387_8.18301536436005_2.17682923459069 chr17 55931645 55932408 + 2.17682923459069 NA Intergenic Intergenic 13233 NM_146249 240120 Mm.441018 NM_146249 ENSMUSG00000062101 Zfp119b - zinc finger protein 119b protein-coding common_peak1_207_2009_-0.137721607866292_10.9041189821331_2.17680846228591 chr4 44021159 44023830 + 2.17680846228591 NA intron (NM_016760, intron 3 of 5) intron (NM_016760, intron 3 of 5) 9844 NM_001290470 12757 Mm.298875 NM_016760 ENSMUSG00000028478 Clta AV026556|Lca clathrin, light polypeptide (Lca) protein-coding unique_peak2_9_76_-0.802264624250482_5.86565422856966_2.17663072835915-2 chr16 87507339 87508018 + 2.17663072835915 NA Intergenic Intergenic 11605 NR_040375 414095 Mm.166361 NR_040375 ENSMUSG00000093606 B130034C11Rik - RIKEN cDNA B130034C11 gene ncRNA unique_peak2_9_76_-0.802264624250482_5.86565422856966_2.17663072835915 chr16 10980681 10981267 + 2.17663072835915 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 12147 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding unique_peak2_9_76_-0.802264624250482_5.86565422856966_2.17663072835915-3 chr4 128618988 128619559 + 2.17663072835915 NA promoter-TSS (NM_205823) promoter-TSS (NM_205823) -654 NM_205823 384059 Mm.331901 NM_205823 ENSMUSG00000062545 Tlr12 Gm1365|Tlr11 toll-like receptor 12 protein-coding common_peak1_84_717_-0.23619818597056_9.36974094083777_2.17655357104209 chr13 119690249 119691152 + 2.17655357104209 NA intron (NM_001291439, intron 1 of 9) CpG 349 NM_001291439 208715 Mm.61526 NM_145942 ENSMUSG00000093930 Hmgcs1 B130032C06Rik 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 protein-coding common_peak2_209_2032_-0.137201957981556_10.920793520854_2.17548016623357 chr11 107129647 107132757 + 2.17548016623357 NA intron (NM_176850, intron 1 of 27) intron (NM_176850, intron 1 of 27) 720 NM_176850 207165 Mm.343986 NM_176850 ENSMUSG00000040481 Bptf 9430093H17Rik|Falz bromodomain PHD finger transcription factor protein-coding unique_peak2_39_311_-0.367655680045116_8.10157437883969_2.17541954095814 chr13 30825115 30827130 + 2.17541954095814 NA intron (NM_025588, intron 23 of 27) intron (NM_025588, intron 23 of 27) 76864 NM_013674 16364 Mm.4677 NM_013674 ENSMUSG00000021356 Irf4 AI385587|IRF-4|LSIRF|NF-EM5|Spip interferon regulatory factor 4 protein-coding common_peak2_148_1362_-0.167644844697589_10.3287474244564_2.17426485480819 chr12 69295784 69298024 + 2.17426485480819 NA 5' UTR (NM_027117, exon 1 of 13) 5' UTR (NM_027117, exon 1 of 13) 223 NM_027117 69554 Mm.234368 NM_027117 ENSMUSG00000020978 Klhdc2 2310022K15Rik|D12Ertd522e|HCLP-1|LCP kelch domain containing 2 protein-coding common_peak1_30_126_0.477997517962141_7.22768344575324_2.17395907650458-2 chr2 31165119 31165710 + 2.17395907650458 NA intron (NM_178760, intron 1 of 17) intron (NM_178760, intron 1 of 17) 13098 NM_178760 277463 Mm.236074 NM_178760 ENSMUSG00000000194 Gpr107 9930033D15Rik|AI790205|C530034M11|mKIAA1624 G protein-coupled receptor 107 protein-coding common_peak1_30_126_0.477997517962141_7.22768344575324_2.17395907650458 chr19 38930992 38931489 + 2.17395907650458 NA intron (NM_008234, intron 1 of 21) CpG 250 NM_008234 15201 Mm.57223 NM_008234 ENSMUSG00000025001 Hells AI323785|E130115I21Rik|LSH|Lysh|PASG|YFK8 helicase, lymphoid specific protein-coding common_peak2_30_126_0.477997517962141_7.22768344575324_2.17395907650458 chr17 28513749 28514905 + 2.17395907650458 NA Intergenic Intergenic -16534 NM_026290 67645 Mm.46170 NM_026290 ENSMUSG00000024223 Armc12 4930511I11Rik|AV041658 armadillo repeat containing 12 protein-coding common_peak1_123_844_0.197099295937472_9.82135717913828_2.17395822354971 chr4 117914282 117915512 + 2.17395822354971 NA 5' UTR (NM_146152, exon 1 of 20) 5' UTR (NM_146152, exon 1 of 20) 102 NM_146152 230673 Mm.287810 NM_146152 ENSMUSG00000033365 Ipo13 Imp13|Kap13|Ranbp13 importin 13 protein-coding common_peak1_81_487_0.257318238688896_9.05939645690733_2.17385476898155 chr2 3743523 3744957 + 2.17385476898155 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 30782 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_432_4217_0.0904050578879954_12.0875459087377_2.17347343020123 chr9 118486349 118489840 + 2.17347343020123 NA Intergenic Intergenic 9905 NM_010136 13813 Mm.200692 NM_010136 ENSMUSG00000032446 Eomes C77258|TBR-2|Tbr2 eomesodermin protein-coding common_peak1_144_1036_0.178568722577664_10.1074845401021_2.17344794712782 chr18 32239564 32241023 + 2.17344794712782 NA promoter-TSS (NM_133658) promoter-TSS (NM_133658) -38 NM_133658 13872 Mm.282335 NM_133658 ENSMUSG00000024382 Ercc3 BTF2 p89|Ercc-3|XPB excision repair cross-complementing rodent repair deficiency, complementation group 3 protein-coding common_peak1_17_135_-0.582777479377672_6.7960741015615_2.17312721645642 chr7 80831764 80832116 + 2.17312721645642 NA Intergenic RLTR19-int|LTR|ERVK -28609 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_566_5927_0.0765484599525141_12.5716039622821_2.17308934676825 chr6 128620090 128630703 + 2.17308934676825 NA Intergenic Intergenic -2462 NM_010737 17057 Mm.16729 NM_010737 ENSMUSG00000030361 Klrb1a Ly55a|NKR-P1.7|NKR-P1A|NKRP12|Nkrp1-a|Nkrp1a|ly-55A killer cell lectin-like receptor subfamily B member 1A protein-coding common_peak2_177_1352_0.157684555974008_10.4807884019635_2.17280628161734 chr4 132260176 132262613 + 2.17280628161734 NA intron (NM_001122992, intron 1 of 10) C-rich|Low_complexity|Low_complexity 155 NM_020273 56809 Mm.103489 NM_020273 ENSMUSG00000028901 Gmeb1 1110050A04Rik|AI256615|AI481278 glucocorticoid modulatory element binding protein 1 protein-coding common_peak1_119_1062_-0.192044826560689_9.95790346825076_2.17215482120487 chr7 39517142 39518235 + 2.17215482120487 NA promoter-TSS (NM_001004139) promoter-TSS (NM_001004139) -78 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak1_52_422_-0.308772087676838_8.57012780928153_2.17179176997625 chr11 116388767 116389544 + 2.17179176997625 NA intron (NM_027258, intron 2 of 18) intron (NM_027258, intron 2 of 18) 23877 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_25_197_-0.473935375438677_7.39238893236027_2.17129663838844-2 chr19 4190140 4190553 + 2.17129663838844 NA intron (NM_178650, intron 2 of 9) MIRc|SINE|MIR 701 NM_178650 108995 Mm.288312 NM_178650 ENSMUSG00000040247 Tbc1d10c 1810062O14Rik|AI428527 TBC1 domain family, member 10c protein-coding common_peak1_25_197_-0.473935375438677_7.39238893236027_2.17129663838844 chr11 11528460 11528935 + 2.17129663838844 NA Intergenic Intergenic 39431 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak2_87_745_-0.230009455188574_9.42802709266095_2.17113264040145 chr13 64311664 64313390 + 2.17113264040145 NA exon (NM_025370, exon 1 of 6) exon (NM_025370, exon 1 of 6) 183 NM_025370 66129 Mm.491110 NM_025370 ENSMUSG00000021482 Aaed1 1110018J18Rik|AI849003 AhpC/TSA antioxidant enzyme domain containing 1 protein-coding common_peak1_127_1143_-0.183781140094153_10.0679807667313_2.17035004397181 chr9 20887664 20888921 + 2.17035004397181 NA 5' UTR (NM_145610, exon 1 of 11) 5' UTR (NM_145610, exon 1 of 11) 117 NM_145610 235036 Mm.2930 NM_145610 ENSMUSG00000004100 Ppan A230087P06Rik|SSF1 peter pan homolog (Drosophila) protein-coding common_peak1_46_228_0.363927299329074_8.02116743776148_2.16997428000329-2 chr8 13907600 13908317 + 2.16997428000329 NA intron (NM_025785, intron 1 of 9) CpG 152 NM_025785 66822 Mm.37950 NM_025785 ENSMUSG00000038365 Fbxo25 9130015I06Rik|AI649137|Fbx25 F-box protein 25 protein-coding common_peak1_46_228_0.363927299329074_8.02116743776148_2.16997428000329 chr3 89251506 89252284 + 2.16997428000329 NA Intergenic (CAGAGA)n|Simple_repeat|Simple_repeat 5422 NM_001310625 66059 Mm.177991 NM_025327 ENSMUSG00000042747 Krtcap2 0610010I12Rik|Kcp2 keratinocyte associated protein 2 protein-coding common_peak1_114_764_0.207250453391815_9.68294116427592_2.16970223247514 chr2 112239086 112240311 + 2.16970223247514 NA promoter-TSS (NM_207206) promoter-TSS (NM_207206) -143 NM_207206 99010 Mm.33438 NM_207206 ENSMUSG00000027134 Lpcat4 AI505034|Agpat7|Aytl3|LPEAT2 lysophosphatidylcholine acyltransferase 4 protein-coding common_peak1_26_204_-0.457272532665852_7.45084383317252_2.16945561146004 chr11 55136345 55136753 + 2.16945561146004 NA intron (NM_172258, intron 6 of 10) intron (NM_172258, intron 6 of 10) 15157 NM_172258 215332 Mm.87054 NM_172258 ENSMUSG00000049491 Slc36a3 PAT3|TRAMD2|tramdorin2 solute carrier family 36 (proton/amino acid symporter), member 3 protein-coding common_peak1_26_204_-0.457272532665852_7.45084383317252_2.16945561146004-2 chr7 141413636 141414234 + 2.16945561146004 NA intron (NM_172116, intron 1 of 7) intron (NM_172116, intron 1 of 7) 190 NM_172116 213350 Mm.290953 NM_172116 ENSMUSG00000051007 Pddc1 BC023835|D230016J19Rik Parkinson disease 7 domain containing 1 protein-coding common_peak2_26_204_-0.457272532665852_7.45084383317252_2.16945561146004 chrX 70364460 70365641 + 2.16945561146004 NA promoter-TSS (NM_010498) promoter-TSS (NM_010498) 35 NM_010498 15931 Mm.233083 NM_010498 ENSMUSG00000035847 Ids AW214631 iduronate 2-sulfatase protein-coding common_peak1_140_1278_-0.173534945302334_10.2340330762305_2.16895862461078 chr3 130690912 130692114 + 2.16895862461078 NA Intergenic MLT1G3|LTR|ERVL-MaLR 17931 NM_025509 66357 Mm.300697 NM_025509 ENSMUSG00000041084 Ostc 2310008M10Rik|5730557H03Rik oligosaccharyltransferase complex subunit (non-catalytic) protein-coding common_peak2_111_738_0.210358818244487_9.63460996326839_2.16870535517584 chr16 38401831 38404754 + 2.16870535517584 NA intron (NM_134102, intron 8 of 10) RMER4B|LTR|ERVK 29853 NM_134102 85031 Mm.279805 NM_134102 ENSMUSG00000002847 Pla1a AA986889|Ps-pla1|Pspla1 phospholipase A1 member A protein-coding common_peak2_141_1008_0.181061397927015_10.0692411580699_2.1686104379034 chr1 165192358 165195414 + 2.1686104379034 NA intron (NM_145512, intron 1 of 7) intron (NM_145512, intron 1 of 7) 547 NM_145512 108735 Mm.288369 NM_145512 ENSMUSG00000040848 Sft2d2 2010005O13Rik|AI506168|AW561909|cI-45 SFT2 domain containing 2 protein-coding common_peak1_45_221_0.370657248929759_7.97974449081499_2.16829879980063 chr5 20938328 20939146 + 2.16829879980063 NA intron (NM_001080977, intron 1 of 7) intron (NM_001080977, intron 1 of 7) -12252 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak1_31_132_0.467583138810334_7.28907400490636_2.1676288709933 chr7 63911805 63912472 + 2.1676288709933 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) -4719 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding unique_peak2_31_132_0.467583138810334_7.28907400490636_2.1676288709933 chr17 87376490 87377440 + 2.1676288709933 NA intron (NM_028639, intron 19 of 19) intron (NM_028639, intron 19 of 19) 50776 NM_029298 75467 Mm.50108 NM_029298 ENSMUSG00000036557 Stpg4 1700011E24Rik|GSE sperm tail PG rich repeat containing 4 protein-coding common_peak2_31_132_0.467583138810334_7.28907400490636_2.1676288709933 chr17 33358198 33359023 + 2.1676288709933 NA intron (NM_207541, intron 1 of 3) CpG 268 NM_207541 224694 Mm.170029 NM_207541 ENSMUSG00000003929 Zfp81 AA409460|AA409461|C330034P10Rik|D330034E10Rik|Hszfp36|KRAB13|Zfp78 zinc finger protein 81 protein-coding unique_peak2_44_214_0.377985787975171_7.93718574357705_2.16740686439292 chr16 36683406 36685074 + 2.16740686439292 NA Intergenic Intergenic -9738 NM_001285788 106347 Mm.17807 NM_134109 ENSMUSG00000022900 Ildr1 AU041483|AU044638 immunoglobulin-like domain containing receptor 1 protein-coding unique_peak1_16_51_0.70309654283308_6.05198798955763_2.16650553432548 chr2 25094776 25095155 + 2.16650553432548 NA 5' UTR (NM_001163626, exon 1 of 12) 5' UTR (NM_001163626, exon 1 of 12) 240 NM_001163626 241275 Mm.218774 NM_172204 ENSMUSG00000036805 Noxa1 NY-CO-31|SDCCAG31 NADPH oxidase activator 1 protein-coding common_peak2_97_842_-0.215900272845042_9.61143868451956_2.16621137743758 chr1 93801082 93802838 + 2.16621137743758 NA promoter-TSS (NM_001105667) promoter-TSS (NM_001105667) -26 NM_001105667 21915 Mm.250332 NM_023136 ENSMUSG00000026281 Dtymk AU044245|CDC8|D10Ertd203e|TMPK|TYPK|Tmk|mtmk deoxythymidylate kinase protein-coding common_peak2_97_842_-0.215900272845042_9.61143868451956_2.16621137743758-2 chr11 61652305 61653984 + 2.16621137743758 NA promoter-TSS (NM_027817) promoter-TSS (NM_027817) -177 NM_027817 71520 Mm.202760 NM_027817 ENSMUSG00000004837 Grap 8430435N19Rik|BB233594 GRB2-related adaptor protein protein-coding common_peak1_97_842_-0.215900272845042_9.61143868451956_2.16621137743758 chr19 6127636 6128612 + 2.16621137743758 NA promoter-TSS (NM_026912) promoter-TSS (NM_026912) 91 NM_026912 69024 Mm.329629 NM_026912 ENSMUSG00000024787 Snx15 1500032B08Rik|E130013C21Rik sorting nexin 15 protein-coding common_peak2_132_1195_-0.180101361535744_10.1339509934302_2.16605542055119 chr11 79527297 79531361 + 2.16605542055119 NA intron (NM_001033711, intron 1 of 1) intron (NM_001033711, intron 1 of 1) 1280 NM_146023 101488212 Mm.439665 NM_146023 ENSMUSG00000070354 Gm21975 Evi2a-evi2b predicted gene 21975 protein-coding common_peak1_21_165_-0.515241688652973_7.11741858702044_2.16596042953229 chr17 31512435 31512895 + 2.16596042953229 NA promoter-TSS (NM_021322) promoter-TSS (NM_021322) -178 NM_021322 57773 Mm.143771 NM_021322 ENSMUSG00000024037 Wdr4 AI415180|AI448349|D530049K22Rik WD repeat domain 4 protein-coding common_peak1_21_165_-0.515241688652973_7.11741858702044_2.16596042953229-4 chr4 129924538 129925006 + 2.16596042953229 NA Intergenic Intergenic 18546 NR_045190 319894 Mm.59196 NR_045190 ENSMUSG00000086369 E330017L17Rik - RIKEN cDNA E330017L17 gene ncRNA common_peak1_21_165_-0.515241688652973_7.11741858702044_2.16596042953229-3 chr3 154204646 154205249 + 2.16596042953229 NA intron (NM_001081263, intron 2 of 21) intron (NM_001081263, intron 2 of 21) 125613 NM_010713 16875 Mm.15530 NM_010713 ENSMUSG00000096225 Lhx8 L3|Lhx7 LIM homeobox protein 8 protein-coding common_peak1_21_165_-0.515241688652973_7.11741858702044_2.16596042953229-2 chr17 56659162 56659575 + 2.16596042953229 NA intron (NM_175350, intron 16 of 21) intron (NM_175350, intron 16 of 21) -13857 NM_001252466 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding common_peak2_182_1729_-0.147902355323831_10.6826051448622_2.16468652579295 chr2 32965959 32968075 + 2.16468652579295 NA Intergenic CpG 3716 NR_002898 104367 Mm.250030 NR_002898 ENSMUSG00000065124 Snora65 MBII-351|Rnu65 small nucleolar RNA, H/ACA box 65 snoRNA common_peak2_122_835_0.198218649137827_9.8064684566498_2.16363848003687 chr11 11760406 11764261 + 2.16363848003687 NA intron (NM_001301866, intron 5 of 5) intron (NM_001301866, intron 5 of 5) 46629 NM_021891 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding common_peak2_173_1631_-0.153015200119286_10.5959177419119_2.16358184100801 chr4 8925863 8929467 + 2.16358184100801 NA Intergenic Intergenic 237259 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak2_271_2752_-0.116803388875965_11.3683872001576_2.16351646473678 chr13 48544866 48547340 + 2.16351646473678 NA Intergenic CpG -7831 NR_029725 387244 NR_029725 ENSMUSG00000065421 Mirlet7a-1 Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1 microRNA let7a-1 ncRNA common_peak2_54_283_0.331543898881234_8.3155190689453_2.16315827635113 chr18 80255436 80256960 + 2.16315827635113 NA promoter-TSS (NM_001164424) promoter-TSS (NM_001164424) -28 NM_001164424 66943 Mm.29247 NM_025861 ENSMUSG00000034006 Pqlc1 2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974 PQ loop repeat containing 1 protein-coding common_peak1_32_138_0.458378874937372_7.34813051019219_2.16313521125884 chr8 76899035 76899631 + 2.16313521125884 NA intron (NR_028579, intron 1 of 1) CpG 840 NR_028579 100039211 Mm.367571 NR_028579 ENSMUSG00000074235 Gm10649 ENSMUSG00000074235 predicted gene 10649 ncRNA common_peak2_185_1432_0.1526061378118_10.561125963168_2.16262802590366 chr19 46001995 46005058 + 2.16262802590366 NA promoter-TSS (NM_176785) promoter-TSS (NM_176785) 48 NM_176785 20170 Mm.101110 NM_176785 ENSMUSG00000074811 Hps6 5330434M19Rik|BLOC2|ru Hermansky-Pudlak syndrome 6 protein-coding common_peak1_106_930_-0.203666938203021_9.76080388845728_2.16218018890644 chr12 100723878 100725206 + 2.16218018890644 NA intron (NM_153587, intron 1 of 17) intron (NM_153587, intron 1 of 17) 486 NM_153587 73086 Mm.220417 NM_153587 ENSMUSG00000021180 Rps6ka5 3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK|RLSK|S6K-alpha-5 ribosomal protein S6 kinase, polypeptide 5 protein-coding common_peak2_69_575_-0.261866975732422_9.0389915135761_2.16113514441807 chr12 92881910 92884354 + 2.16113514441807 NA Intergenic RLTR3_Mm|LTR|ERVK 561691 NR_126436 75295 Mm.243878 NR_126436 4930559C10Rik - RIKEN cDNA 4930559C10 gene ncRNA common_peak1_101_652_0.223343906767381_9.46261113493012_2.16109946483593 chr11 68438403 68440232 + 2.16109946483593 NA intron (NM_177320, intron 1 of 18) intron (NM_177320, intron 1 of 18) 7192 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak2_292_2567_0.115164176070547_11.3840115751576_2.16100205842132 chr9 121717831 121720909 + 2.16100205842132 NA intron (NM_010918, intron 1 of 16) CpG 189 NM_010918 18087 Mm.32842 NM_010918 ENSMUSG00000032525 Nktr 5330401F18Rik|D9Wsu172e natural killer tumor recognition sequence protein-coding common_peak1_33_144_0.450239482145593_7.40502883108773_2.16026677504652-3 chr9 90232850 90233581 + 2.16026677504652 NA intron (NM_194334, intron 3 of 12) intron (NM_194334, intron 3 of 12) 37554 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak1_33_144_0.450239482145593_7.40502883108773_2.16026677504652 chr6 131291875 131292438 + 2.16026677504652 NA intron (NM_025564, intron 1 of 4) intron (NM_025564, intron 1 of 4) 1088 NM_025564 66441 Mm.46623 NM_025564 ENSMUSG00000030188 Magohb 2010012C16Rik|Mago|Magoh|Magoh-rs1 mago homolog B, exon junction complex core component protein-coding common_peak1_33_144_0.450239482145593_7.40502883108773_2.16026677504652-2 chr7 99431884 99432426 + 2.16026677504652 NA intron (NM_201352, intron 4 of 17) intron (NM_201352, intron 4 of 17) -33849 NM_028145 72184 Mm.153585 NM_028145 ENSMUSG00000035298 Klhl35 2810406K13Rik kelch-like 35 protein-coding common_peak1_42_201_0.387515687502156_7.85196932650287_2.16019912074039 chr19 21784480 21785145 + 2.16019912074039 NA intron (NM_031997, intron 2 of 24) intron (NM_031997, intron 2 of 24) 6472 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_93_803_-0.221308292566553_9.54039754489565_2.15997605601174 chr7 45395222 45395864 + 2.15997605601174 NA non-coding (NR_126539, exon 1 of 10) non-coding (NR_126539, exon 1 of 10) 199 NM_009224 20637 Mm.216386 NM_009224 ENSMUSG00000063511 Snrnp70 2700022N21Rik|3200002N22Rik|AI325098|R74807|Rnu1p70|Rnulp70|Snrp70|Srnp70|U1-70|U1-70K small nuclear ribonucleoprotein 70 (U1) protein-coding unique_peak2_43_208_0.379050921799425_7.89688459298059_2.15954954364949 chr3 105767807 105769610 + 2.15954954364949 NA intron (NM_145541, intron 1 of 7) L1MC1|LINE|L1 32673 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein-1a protein-coding common_peak1_91_569_0.236867317414118_9.27325176775916_2.15950484570668 chr2 135773191 135774932 + 2.15950484570668 NA intron (NM_013829, intron 1 of 36) intron (NM_013829, intron 1 of 36) 32231 NM_013829 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak2_188_1795_-0.14482795863608_10.7381576554231_2.15895697446874 chr11 100319823 100322075 + 2.15895697446874 NA exon (NM_011508, exon 3 of 4) exon (NM_011508, exon 3 of 4) 953 NM_011508 20918 Mm.13886 NM_011508 ENSMUSG00000035530 Eif1 Sui1-rs1 eukaryotic translation initiation factor 1 protein-coding unique_peak2_27_212_-0.448144870207913_7.51063718512188_2.15871098834592 chr10 67679972 67681273 + 2.15871098834592 NA Intergenic Intergenic -131667 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_35_156_0.436676924167396_7.51295921097532_2.15871098834592 chr12 102648859 102649664 + 2.15871098834592 NA intron (NM_172584, intron 2 of 9) B4|SINE|B4 35759 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_27_212_-0.448144870207913_7.51063718512188_2.15871098834592 chr19 5041512 5042095 + 2.15871098834592 NA TTS (NM_175383) TTS (NM_175383) 399 NM_134155 107392 Mm.29628 NM_134155 ENSMUSG00000080268 Brms1 AV003220|AW554636 breast cancer metastasis-suppressor 1 protein-coding common_peak2_58_476_-0.292319050963686_8.75168593052367_2.15861798893914 chr11 46262190 46264468 + 2.15861798893914 NA intron (NM_133769, intron 13 of 30) intron (NM_133769, intron 13 of 30) 27772 NM_177075 320116 Mm.39600 NM_177075 ENSMUSG00000048721 Fndc9 C030019I05Rik fibronectin type III domain containing 9 protein-coding common_peak1_50_405_-0.31766514005772_8.50650334715632_2.15857629392742 chr6 108502971 108503721 + 2.15857629392742 NA intron (NM_010585, intron 53 of 61) L1ME1|LINE|L1 13603 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_256_2171_0.124793261352314_11.1472050184805_2.15824854871426 chr11 80382215 80385377 + 2.15824854871426 NA intron (NR_045038, intron 1 of 16) intron (NR_045038, intron 1 of 16) 517 NM_001130171 22680 Mm.401332 NM_011751 ENSMUSG00000017421 Zfp207 8430401D15Rik|BuGZ|Zep|Znf207 zinc finger protein 207 protein-coding common_peak2_308_2748_0.110991208417069_11.4801867957215_2.15660658918949 chr8 105635490 105638859 + 2.15660658918949 NA intron (NM_181322, intron 1 of 11) CpG 636 NM_181322 13018 Mm.269474 NM_181322 ENSMUSG00000005698 Ctcf AW108038 CCCTC-binding factor protein-coding common_peak2_171_1294_0.160215410052746_10.4188440876003_2.15649980060797 chr4 145017282 145020757 + 2.15649980060797 NA intron (NM_001276465, intron 66 of 69) intron (NM_001276465, intron 66 of 69) 125882 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_24_92_0.546856381028353_6.81258700162221_2.15649554508885-2 chr15 99471178 99471801 + 2.15649554508885 NA intron (NM_029236, intron 1 of 1) intron (NM_029236, intron 1 of 1) 3241 NM_029236 75284 Mm.32826 NM_029236 ENSMUSG00000037525 Bcdin3d 4930556P03Rik|AV138748 BCDIN3 domain containing protein-coding unique_peak2_24_92_0.546856381028353_6.81258700162221_2.15649554508885 chr17 83352592 83353548 + 2.15649554508885 NA intron (NM_199466, intron 1 of 20) intron (NM_199466, intron 1 of 20) 2139 NM_001114362 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding common_peak1_24_92_0.546856381028353_6.81258700162221_2.15649554508885 chr10 39389150 39389591 + 2.15649554508885 NA intron (NM_008054, intron 1 of 13) intron (NM_008054, intron 1 of 13) 19571 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_24_92_0.546856381028353_6.81258700162221_2.15649554508885-3 chr7 99128733 99129319 + 2.15649554508885 NA intron (NM_178635, intron 1 of 14) intron (NM_178635, intron 1 of 14) 12118 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak2_325_3407_-0.104252865118111_11.6825831876668_2.15591586537172 chrX 42149220 42153810 + 2.15591586537172 NA intron (NM_021465, intron 1 of 32) intron (NM_021465, intron 1 of 32) 814 NM_021465 20843 Mm.290422 NM_021465 ENSMUSG00000025862 Stag2 9230105L23Rik|B230112I07Rik|SA-2|SAP2 stromal antigen 2 protein-coding common_peak2_378_3563_0.0977497383660832_11.848156490705_2.15586721294389 chr6 124739520 124742775 + 2.15586721294389 NA promoter-TSS (NM_013535) promoter-TSS (NM_013535) -68 NM_013535 14790 Mm.439877 NM_013535 ENSMUSG00000072772 Grcc10 2310033H05Rik|C10 gene rich cluster, C10 gene protein-coding common_peak1_38_175_0.413511830970563_7.66618753412258_2.15563440130454 chr16 75907747 75908411 + 2.15563440130454 NA intron (NM_023380, intron 1 of 7) intron (NM_023380, intron 1 of 7) 1187 NM_023380 67742 Mm.131406 NM_023380 ENSMUSG00000022876 Samsn1 4930571B16Rik|930571B16Rik|Hacs1|SLy2 SAM domain, SH3 domain and nuclear localization signals, 1 protein-coding common_peak1_38_175_0.413511830970563_7.66618753412258_2.15563440130454-2 chr2 31134859 31135671 + 2.15563440130454 NA intron (NM_001177648, intron 1 of 16) intron (NM_001177648, intron 1 of 16) 6743 NM_001177649 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding unique_peak2_38_175_0.413511830970563_7.66618753412258_2.15563440130454 chr1 74331921 74333489 + 2.15563440130454 NA promoter-TSS (NM_019999) promoter-TSS (NM_019999) 95 NM_019999 56695 Mm.384726 NM_019999 ENSMUSG00000026179 Pnkd 2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2 paroxysmal nonkinesiogenic dyskinesia protein-coding common_peak1_63_520_-0.275661676780627_8.88730872388819_2.15527544135818 chr19 5456776 5457840 + 2.15527544135818 NA exon (NM_198616, exon 1 of 1) exon (NM_198616, exon 1 of 1) 255 NM_198616 240514 Mm.329657 NM_198616 ENSMUSG00000095098 Ccdc85b AI842788|BB115872 coiled-coil domain containing 85B protein-coding common_peak2_63_520_-0.275661676780627_8.88730872388819_2.15527544135818 chr7 58709811 58712492 + 2.15527544135818 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 52949 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_63_520_-0.275661676780627_8.88730872388819_2.15527544135818-2 chr3 146149758 146150659 + 2.15527544135818 NA promoter-TSS (NM_001005846) promoter-TSS (NM_001005846) 34 NM_001005846 68279 Mm.116862 NM_026656 ENSMUSG00000011008 Mcoln2 3300002C04Rik|AI549968|C86638|TRPML2 mucolipin 2 protein-coding common_peak1_49_396_-0.320367693820216_8.47281135023285_2.15504147311062 chr4 124693033 124693696 + 2.15504147311062 NA intron (NM_026031, intron 1 of 7) CpG 190 NM_026031 67205 Mm.259121 NM_026031 ENSMUSG00000028907 Utp11l 2700082D03Rik|CGI-94|Cgi94|Utp11 UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) protein-coding common_peak1_99_861_-0.212304244580004_9.6453919367991_2.15471651495403 chr11 6266959 6268415 + 2.15471651495403 NA promoter-TSS (NM_026538) promoter-TSS (NM_026538) 42 NM_026538 52513 Mm.29810 NM_026538 ENSMUSG00000004393 Ddx56 2600001H07Rik|D11Ertd619e|Noh61 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 protein-coding common_peak2_315_2828_0.109247252089776_11.5207000874411_2.15446823652474 chr2 19656791 19659391 + 2.15446823652474 NA promoter-TSS (NM_027715) promoter-TSS (NM_027715) 29 NM_027715 71198 Mm.83981 NM_027715 ENSMUSG00000043415 Otud1 4933428L19Rik OTU domain containing 1 protein-coding unique_peak2_11_90_-0.720631483292957_6.14747889855222_2.15379281459257-2 chr4 106313220 106314043 + 2.15379281459257 NA Intergenic Intergenic -2582 NM_183225 329908 Mm.234544 NM_183225 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 protein-coding unique_peak2_11_90_-0.720631483292957_6.14747889855222_2.15379281459257-3 chr6 136980158 136980819 + 2.15379281459257 NA Intergenic Intergenic 25965 NM_023898 78600 Mm.290622 NM_023898 ENSMUSG00000064330 Pde6h A930033D18Rik|PDEgamma phosphodiesterase 6H, cGMP-specific, cone, gamma protein-coding unique_peak2_11_90_-0.720631483292957_6.14747889855222_2.15379281459257-4 chr8 88694140 88695043 + 2.15379281459257 NA Intergenic Intergenic -2437 NM_001128170 74256 Mm.490395 NM_173369 ENSMUSG00000036712 Cyld 2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849 CYLD lysine 63 deubiquitinase protein-coding unique_peak2_11_90_-0.720631483292957_6.14747889855222_2.15379281459257-5 chrX 104116172 104116831 + 2.15379281459257 NA promoter-TSS (NR_030430) promoter-TSS (NR_030430) -227 NR_030430 751535 NR_030430 ENSMUSG00000076286 Mir672 Mirn672|mir-672|mmu-mir-672 microRNA 672 ncRNA unique_peak2_11_90_-0.720631483292957_6.14747889855222_2.15379281459257 chr2 30547058 30547754 + 2.15379281459257 NA Intergenic Intergenic -47638 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding common_peak1_194_1862_-0.142362922455458_10.7922304977139_2.15370175571315 chr9 88481250 88483288 + 2.15370175571315 NA 5' UTR (NM_001284328, exon 1 of 12) 5' UTR (NM_001284328, exon 1 of 12) 128 NM_019666 56403 Mm.260545 NM_019666 ENSMUSG00000032423 Syncrip 2610109K23Rik|4632417O19Rik|GRY-RBP|Nsap1|Nsap1l|hnRNP Q|pp68 synaptotagmin binding, cytoplasmic RNA interacting protein protein-coding common_peak2_147_1064_0.176370558470923_10.1448229943487_2.1528758773353 chr11 20552303 20554102 + 2.1528758773353 NA intron (NM_021372, intron 1 of 1) intron (NM_021372, intron 1 of 1) 9949 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding common_peak1_117_1041_-0.193000846050326_9.92863913925335_2.15263236222398 chr9 117901851 117903245 + 2.15263236222398 NA Intergenic Intergenic -137974 NM_001286508 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak1_37_169_0.417585578445545_7.61818372536047_2.15233731464744 chr19 11449811 11450606 + 2.15233731464744 NA intron (NM_021718, intron 2 of 6) intron (NM_021718, intron 2 of 6) 6650 NM_021718 60361 Mm.33957 NM_021718 ENSMUSG00000056290 Ms4a4b AI463180|Chandra|Ly116 membrane-spanning 4-domains, subfamily A, member 4B protein-coding common_peak1_18_142_-0.559507133381499_6.88011777008764_2.15190375897031-2 chr15 79141285 79141773 + 2.15190375897031 NA promoter-TSS (NM_138581) promoter-TSS (NM_138581) 162 NM_027231 69833 Mm.279861 NM_027231 ENSMUSG00000033020 Polr2f 1810060D16Rik|RPB6 polymerase (RNA) II (DNA directed) polypeptide F protein-coding common_peak1_18_142_-0.559507133381499_6.88011777008764_2.15190375897031 chr11 100319213 100319711 + 2.15190375897031 NA promoter-TSS (NM_011508) promoter-TSS (NM_011508) -534 NM_011508 20918 Mm.13886 NM_011508 ENSMUSG00000035530 Eif1 Sui1-rs1 eukaryotic translation initiation factor 1 protein-coding common_peak2_302_2680_0.11242720577618_11.4447691068707_2.15157394647428 chr6 146576833 146579249 + 2.15157394647428 NA promoter-TSS (NM_138757) promoter-TSS (NM_138757) 130 NM_026218 67529 Mm.333499 NM_026218 ENSMUSG00000040242 Fgfr1op2 1500031J01Rik FGFR1 oncogene partner 2 protein-coding common_peak1_97_619_0.227364142822802_9.38980647668564_2.15140010025514 chr10 80319733 80320602 + 2.15140010025514 NA intron (NM_025521, intron 1 of 1) CpG 381 NM_025521 66374 Mm.383824 NM_025521 ENSMUSG00000020133 2310011J03Rik AI452186|AW545358 RIKEN cDNA 2310011J03 gene protein-coding common_peak2_166_1246_0.162500855858289_10.3654961777588_2.15131052158018 chr3 96575786 96577952 + 2.15131052158018 NA Intergenic Intergenic -10068 NR_040409 100038464 Mm.475126 NR_040409 ENSMUSG00000074398 Gm15441 ENSMUSG00000074398|OTTMUSG00000021867 predicted gene 15441 ncRNA common_peak2_166_1246_0.162500855858289_10.3654961777588_2.15131052158018-2 chr3 104510858 104512731 + 2.15131052158018 NA 5' UTR (NM_001025067, exon 1 of 18) 5' UTR (NM_001025067, exon 1 of 18) 124 NM_001310698 269473 Mm.34855 NM_001025067 ENSMUSG00000032913 Lrig2 4632419I10Rik|BB096938|LIG-2 leucine-rich repeats and immunoglobulin-like domains 2 protein-coding common_peak2_121_827_0.197644804734004_9.79230935986633_2.1512545048993 chr2 32880955 32883570 + 2.1512545048993 NA intron (NM_146119, intron 1 of 13) B2_Mm2|SINE|B2 6128 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding unique_peak2_39_182_0.40204670053309_7.71672318855059_2.1509361424214 chrX 48152043 48153755 + 2.1509361424214 NA intron (NM_028773, intron 1 of 7) intron (NM_028773, intron 1 of 7) 6463 NM_028773 74131 Mm.276131 NM_028773 ENSMUSG00000031101 Sash3 1200013B08Rik|AW413946|SLY1 SAM and SH3 domain containing 3 protein-coding common_peak2_39_182_0.40204670053309_7.71672318855059_2.1509361424214 chr6 99050999 99052119 + 2.1509361424214 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) -23261 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_56_457_-0.29470506854677_8.69185125382356_2.15020742118943 chr7 108934413 108935362 + 2.15020742118943 NA intron (NM_025344, intron 1 of 7) intron (NM_025344, intron 1 of 7) 472 NM_025344 66085 Mm.182962 NM_025344 ENSMUSG00000031029 Eif3f 0610037M02Rik|AA409853|Eif3s5 eukaryotic translation initiation factor 3, subunit F protein-coding common_peak2_28_220_-0.439239244878864_7.568282936952_2.14995720371678 chr13 13953645 13954448 + 2.14995720371678 NA promoter-TSS (NM_178640) promoter-TSS (NM_178640) -628 NM_178640 97884 Mm.21686 NM_178640 ENSMUSG00000039242 B3galnt2 A930105D20Rik|C80633|D230016N13Rik UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 protein-coding common_peak1_28_220_-0.439239244878864_7.568282936952_2.14995720371678 chr8 70790782 70791398 + 2.14995720371678 NA intron (NM_199308, intron 1 of 25) intron (NM_199308, intron 1 of 25) 1343 NM_199308 546071 Mm.250731 NM_199308 ENSMUSG00000031833 Mast3 BC024265|mKIAA0561 microtubule associated serine/threonine kinase 3 protein-coding unique_peak2_36_163_0.422231646593326_7.56866782791475_2.14995720371673 chr5 64229828 64231107 + 2.14995720371673 NA 5' UTR (NM_001289514, exon 1 of 19) 5' UTR (NM_001289514, exon 1 of 19) 110 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak2_36_163_0.422231646593326_7.56866782791475_2.14995720371673 chr9 21183459 21184599 + 2.14995720371673 NA promoter-TSS (NM_001310750) promoter-TSS (NM_001310750) -72 NM_001310750 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding common_peak1_36_163_0.422231646593326_7.56866782791475_2.14995720371673 chr8 120494713 120495488 + 2.14995720371673 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) 6234 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_277_2823_-0.114927281292223_11.4060607326251_2.14972354091203 chr16 43661797 43666181 + 2.14972354091203 NA intron (NM_001146325, intron 1 of 3) intron (NM_001146325, intron 1 of 3) 195 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak2_100_644_0.223692843294842_9.44500177195804_2.14967025558-2 chr11 101086217 101088457 + 2.14967025558 NA promoter-TSS (NM_011550) promoter-TSS (NM_011550) 47 NM_001159384 21428 Mm.628 NM_011550 ENSMUSG00000017801 Mlx Tcfl4|Tf4|bHLHd13 MAX-like protein X protein-coding common_peak2_100_644_0.223692843294842_9.44500177195804_2.14967025558 chr1 167307916 167309316 + 2.14967025558 NA promoter-TSS (NM_001039483) promoter-TSS (NM_001039483) -54 NM_001039483 68944 Mm.330045 NM_026881 ENSMUSG00000052428 Tmco1 1190006A08Rik|4930403O06Rik|AA109065|AU022572|ESTM39 transmembrane and coiled-coil domains 1 protein-coding common_peak1_90_561_0.237918722499121_9.25338568147049_2.14892378656772 chr1 87326914 87328064 + 2.14892378656772 NA intron (NM_146112, intron 1 of 28) CpG 491 NM_001110212 227331 Mm.23065 NM_146112 ENSMUSG00000048000 Gigyf2 2610016F01Rik|A830080H02Rik|AI852361|AW259676|BC006835|Tnrc15|mKIAA0642 GRB10 interacting GYF protein 2 protein-coding common_peak2_70_402_0.27852351731905_8.79389778718749_2.14862728682306 chr12 91584790 91586352 + 2.14862728682306 NA intron (NM_175335, intron 2 of 8) B3|SINE|B2 4078 NM_031391 83602 Mm.275728 NM_031391 ENSMUSG00000020962 Gtf2a1 6330549H03Rik|AA536742|AA959775|AW060250|TfIIAa/b|Tfiia1 general transcription factor II A, 1 protein-coding unique_peak2_15_120_-0.622609974149427_6.60755825019988_2.14852666492447-2 chr6 56915546 56916405 + 2.14852666492447 NA intron (NM_026004, intron 1 of 8) intron (NM_026004, intron 1 of 8) 7957 NM_026004 107569 Mm.158936 NM_026004 ENSMUSG00000029780 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III protein-coding common_peak1_15_120_-0.622609974149427_6.60755825019988_2.14852666492447-3 chr6 114917090 114917521 + 2.14852666492447 NA intron (NM_177683, intron 1 of 4) intron (NM_177683, intron 1 of 4) 4447 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_15_120_-0.622609974149427_6.60755825019988_2.14852666492447-2 chr19 11409002 11409367 + 2.14852666492447 NA intron (NM_029499, intron 1 of 6) L1M2a|LINE|L1 1523 NM_029499 64380 Mm.440715 NM_029499 ENSMUSG00000024675 Ms4a4c 5830413L19Rik|AI449185|Ms4a9 membrane-spanning 4-domains, subfamily A, member 4C protein-coding common_peak1_15_120_-0.622609974149427_6.60755825019988_2.14852666492447-4 chr7 16053443 16053965 + 2.14852666492447 NA Intergenic Intergenic -18238 NM_001099277 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak1_15_120_-0.622609974149427_6.60755825019988_2.14852666492447 chr18 12642762 12643036 + 2.14852666492447 NA promoter-TSS (NM_028341) promoter-TSS (NM_028341) -634 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding unique_peak2_15_120_-0.622609974149427_6.60755825019988_2.14852666492447 chr1 75251293 75252049 + 2.14852666492447 NA intron (NM_008985, intron 19 of 22) intron (NM_008985, intron 19 of 22) 12537 NM_008985 19275 Mm.2902 NM_008985 ENSMUSG00000026204 Ptprn IA-2|mIA-A|mKIAA4064 protein tyrosine phosphatase, receptor type, N protein-coding common_peak1_177_1353_0.156618656375548_10.4813213517628_2.14837979313343 chr2 34802143 34803164 + 2.14837979313343 NA Intergenic CpG -2741 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding common_peak1_298_2635_0.113331064160292_11.4208001870882_2.14824853695442 chr12 73584356 73586833 + 2.14824853695442 NA intron (NM_008856, intron 1 of 13) CpG 798 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak2_206_1996_-0.136888781043893_10.895174226922_2.14735408624558 chr7 19560216 19563126 + 2.14735408624558 NA intron (NM_199149, intron 1 of 12) intron (NM_199149, intron 1 of 12) 727 NM_199149 232947 Mm.219662 NM_199149 ENSMUSG00000051403 Ppp1r37 Gm158|Lrrc68 protein phosphatase 1, regulatory subunit 37 protein-coding common_peak1_109_721_0.212048302685101_9.60187917822972_2.14713727764514 chr13 55321298 55322664 + 2.14713727764514 NA promoter-TSS (NM_009000) promoter-TSS (NM_009000) -1 NM_009000 19336 Mm.220923 NM_009000 ENSMUSG00000034789 Rab24 6530406O07Rik RAB24, member RAS oncogene family protein-coding common_peak1_189_1806_-0.144298689403032_10.7472314461631_2.14706851110331 chr9 95857553 95858963 + 2.14706851110331 NA promoter-TSS (NM_001271569) promoter-TSS (NM_001271569) -376 NM_001271569 73410 Mm.443314 NM_028533 ENSMUSG00000096655 1700065D16Rik - RIKEN cDNA 1700065D16 gene protein-coding common_peak1_88_754_-0.227314465448254_9.44667560148832_2.14702208106428 chr7 96951315 96952180 + 2.14702208106428 NA 5' UTR (NM_153591, exon 1 of 14) 5' UTR (NM_153591, exon 1 of 14) 220 NM_153591 244141 Mm.274864 NM_153591 ENSMUSG00000018995 Nars2 AI875199 asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) protein-coding common_peak1_207_1655_0.141771220700676_10.7643725678497_2.14672185312627 chr4 46138032 46139432 + 2.14672185312627 NA promoter-TSS (NM_173033) promoter-TSS (NM_173033) 221 NM_001033201 433702 Mm.389536 NM_001033201 ENSMUSG00000028330 Ncbp1 AU014645|AW538051|CBP80 nuclear cap binding protein subunit 1 protein-coding common_peak2_270_2324_0.12045253246465_11.2432412671151_2.14622360354099 chr15 44618262 44621176 + 2.14622360354099 NA promoter-TSS (NM_019480) promoter-TSS (NM_019480) 78 NM_019480 55960 Mm.287896 NM_019480 ENSMUSG00000022339 Ebag9 AI835379|Rcas1 estrogen receptor-binding fragment-associated gene 9 protein-coding common_peak1_315_3284_-0.106353941723663_11.6285006843479_2.14609726317366 chr11 86590092 86593150 + 2.14609726317366 NA intron (NM_029478, intron 10 of 11) intron (NM_029478, intron 10 of 11) -7463 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak2_487_4907_0.0834368509431336_12.3026379591345_2.14574014702328 chr2 75702073 75705699 + 2.14574014702328 NA intron (NR_132727, intron 1 of 1) CpG 777 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak1_190_1483_0.149096129365992_10.6098234413038_2.1457079412213 chr4 151996288 151997281 + 2.1457079412213 NA promoter-TSS (NM_172705) promoter-TSS (NM_172705) -605 NM_172705 230936 Mm.25582 NM_172705 ENSMUSG00000047777 Phf13 BC029632|Phf5|SPOC1 PHD finger protein 13 protein-coding unique_peak1_10_25_0.932745713366504_5.16681257482434_2.14568534968695 chr16 17179999 17180408 + 2.14568534968695 NA intron (NM_009456, intron 1 of 3) B2_Mm1a|SINE|B2 21289 NM_009456 22195 Mm.3074 NM_009456 ENSMUSG00000038965 Ube2l3 C79827|UbcM4|Ubce7 ubiquitin-conjugating enzyme E2L 3 protein-coding common_peak1_119_1061_-0.190686995833737_9.95722455288728_2.14460316860878 chr14 57825819 57826907 + 2.14460316860878 NA promoter-TSS (NM_198605) promoter-TSS (NM_198605) 124 NM_026401 67840 Mm.319530 NM_026401 ENSMUSG00000021967 Mrpl57 2610025P17Rik|AV005697|Mrp63 mitochondrial ribosomal protein L57 protein-coding common_peak2_294_2591_0.113781989035521_11.3967409974024_2.14444799556696 chr16 10770700 10776004 + 2.14444799556696 NA Intergenic Intergenic 12184 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding common_peak2_55_448_-0.297394573536865_8.66187434797271_2.1442487002851 chr7 131370585 131371945 + 2.1442487002851 NA exon (NM_001039534, exon 1 of 6) exon (NM_001039534, exon 1 of 6) 119 NM_001039534 214580 Mm.272948 NM_177609 ENSMUSG00000063179 Pstk 5430423O14Rik|5730458D16Rik|Gm1099|R75284 phosphoseryl-tRNA kinase protein-coding common_peak2_101_880_-0.208715120606602_9.67864064861711_2.14400565846656 chr11 79022386 79024484 + 2.14400565846656 NA promoter-TSS (NR_045873) promoter-TSS (NR_045873) -162 NR_045873 790910 Mm.440410 NR_045873 Gm11201 ENSMUSG00000072637|OTTMUSG00000000169 predicted gene 11201 ncRNA common_peak2_22_173_-0.504482691755218_7.19070214997112_2.14386678708414 chr16 78198106 78198836 + 2.14386678708414 NA Intergenic MLT1F1|LTR|ERVL-MaLR 56983 NR_045698 100503619 Mm.387531 NR_045698 ENSMUSG00000109841 E330011O21Rik - RIKEN cDNA E330011O21 gene ncRNA common_peak1_22_173_-0.504482691755218_7.19070214997112_2.14386678708414-2 chrX 74372866 74373397 + 2.14386678708414 NA intron (NR_103489, intron 1 of 5) CpG 218 NM_001256104 214601 Mm.19931 NM_145406 ENSMUSG00000032806 Slc10a3 DXHXS253E|DXS253Eh|DXSmhG28|P3 solute carrier family 10 (sodium/bile acid cotransporter family), member 3 protein-coding common_peak1_22_173_-0.504482691755218_7.19070214997112_2.14386678708414 chr3 95279225 95279815 + 2.14386678708414 NA intron (NM_173347, intron 1 of 7) B1_Mur1|SINE|Alu 2556 NM_173347 229589 Mm.14155 NM_173347 ENSMUSG00000015711 Prune1 9230112O05Rik|C130058A12|DRES-17|HTCD37|PRUNEM1|Prune|Prune-M1 prune exopolyphosphatase protein-coding common_peak2_292_2568_0.114602488292032_11.3842924190468_2.14331050410373 chr17 28696361 28703240 + 2.14331050410373 NA intron (NM_001168514, intron 2 of 12) intron (NM_001168514, intron 2 of 12) 7232 NM_001168513 26416 Mm.311337 NM_011951 ENSMUSG00000053436 Mapk14 CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha mitogen-activated protein kinase 14 protein-coding common_peak2_164_1532_-0.156716447119576_10.503783758099_2.14315844722912 chr7 45740898 45742721 + 2.14315844722912 NA intron (NM_017465, intron 2 of 6) intron (NM_017465, intron 2 of 6) -15993 NM_027055 69363 Mm.45607 NM_027055 ENSMUSG00000070563 Spaca4 1700008E09Rik|AV043694|Samp14 sperm acrosome associated 4 protein-coding common_peak1_29_228_-0.430547355499241_7.62393011034732_2.14296733501095-2 chr2 32917847 32918346 + 2.14296733501095 NA intron (NM_146119, intron 5 of 13) ID4_|SINE|ID 41962 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_29_228_-0.430547355499241_7.62393011034732_2.14296733501095-3 chr7 90146834 90147502 + 2.14296733501095 NA intron (NM_001252520, intron 1 of 20) C-rich|Low_complexity|Low_complexity 16936 NM_001252520 233489 Mm.235175 NM_146194 ENSMUSG00000039361 Picalm CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114 phosphatidylinositol binding clathrin assembly protein protein-coding common_peak1_29_228_-0.430547355499241_7.62393011034732_2.14296733501095 chr10 80138754 80139445 + 2.14296733501095 NA non-coding (NR_036582, exon 1 of 11) non-coding (NR_036582, exon 1 of 11) 268 NR_036582 100503659 Mm.485395 NM_015761 ENSMUSG00000035640 Cbarp 9630008F14|Dos|R29144/1 calcium channel, voltage-dependent, beta subunit associated regulatory protein protein-coding common_peak2_124_1111_-0.184820293708803_10.0265309258691_2.14100928443454 chr18 36669418 36671365 + 2.14100928443454 NA promoter-TSS (NM_001164406) promoter-TSS (NM_001164406) -80 NR_028355 24068 Mm.29058 NM_025291 ENSMUSG00000006050 Sra1 AA959952|Sra|Srap|Straa1|Strra1 steroid receptor RNA activator 1 protein-coding common_peak2_96_611_0.227950520670758_9.37136310302803_2.14023466695076 chr1 60342616 60344236 + 2.14023466695076 NA exon (NM_030013, exon 1 of 13) exon (NM_030013, exon 1 of 13) 126 NM_001313721 77951 Mm.197640 NM_030013 ENSMUSG00000049439 Cyp20a1 A930011N14Rik|Cypm cytochrome P450, family 20, subfamily a, polypeptide 1 protein-coding unique_peak2_20_71_0.607549642356186_6.47369982262041_2.14017528598126 chr8 25543214 25544038 + 2.14017528598126 NA intron (NM_001079909, intron 2 of 16) intron (NM_001079909, intron 2 of 16) 12457 NR_110510 102633315 Mm.437828 NR_110510 ENSMUSG00000086134 Gm16159 OTTMUSG00000031030 predicted gene 16159 ncRNA unique_peak1_20_71_0.607549642356186_6.47369982262041_2.14017528598126 chr17 79043205 79043779 + 2.14017528598126 NA Intergenic Intergenic -8414 NM_027455 70536 Mm.293870 NM_027455 ENSMUSG00000024084 Qpct 5730422A13Rik glutaminyl-peptide cyclotransferase (glutaminyl cyclase) protein-coding common_peak1_20_71_0.607549642356186_6.47369982262041_2.14017528598126-3 chr4 8647906 8648500 + 2.14017528598126 NA Intergenic Intergenic -42203 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_20_71_0.607549642356186_6.47369982262041_2.14017528598126-2 chr18 56925014 56925522 + 2.14017528598126 NA intron (NM_177115, intron 1 of 4) CpG 280 NM_177115 320253 Mm.312623 NM_177115 ENSMUSG00000032656 March3 6330411I15Rik|A530081L18Rik|AI843639|MARCH-III membrane-associated ring finger (C3HC4) 3 protein-coding common_peak1_20_71_0.607549642356186_6.47369982262041_2.14017528598126-4 chr9 120036491 120036917 + 2.14017528598126 NA Intergenic Intergenic -13106 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak2_20_71_0.607549642356186_6.47369982262041_2.14017528598126 chr9 21260956 21261523 + 2.14017528598126 NA Intergenic B2_Mm2|SINE|B2 -4046 NM_153583 235040 Mm.440165 NM_153583 ENSMUSG00000002820 Atg4d 9830134P12Rik|APG4-D|Apg4d|Atg4dl|Autl4 autophagy related 4D, cysteine peptidase protein-coding common_peak1_20_71_0.607549642356186_6.47369982262041_2.14017528598126 chr10 39406981 39407404 + 2.14017528598126 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 37393 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_12_33_0.841346092204238_5.50813588735246_2.13991130133362 chr4 46553227 46553639 + 2.13991130133362 NA intron (NM_001164804, intron 2 of 11) ID_B1|SINE|B4 13007 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding unique_peak2_13_105_-0.667968015731629_6.39393644669738_2.1391845650692 chr7 83647111 83648056 + 2.1391845650692 NA intron (NM_010551, intron 16 of 18) intron (NM_010551, intron 16 of 18) 15566 NM_023377 170460 Mm.357953 NM_023377 ENSMUSG00000046027 Stard5 2310058G22Rik|AI607880|D7Ertd152e StAR-related lipid transfer (START) domain containing 5 protein-coding common_peak1_44_352_-0.337345735706549_8.29485150541791_2.13902183422315 chr16 32653554 32654569 + 2.13902183422315 NA intron (NM_016788, intron 1 of 15) intron (NM_016788, intron 1 of 15) 9418 NM_016788 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding common_peak1_54_439_-0.300068695138744_8.63132536595529_2.13858216335248 chr2 68471467 68472416 + 2.13858216335248 NA promoter-TSS (NM_016866) promoter-TSS (NM_016866) 40 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding common_peak1_64_357_0.29309874306864_8.63036514879858_2.13858216335248 chr2 121008356 121009181 + 2.13858216335248 NA TTS (NM_175285) TTS (NM_175285) 360 NM_010761 17151 Mm.7838 NM_010761 ENSMUSG00000023572 Ccndbp1 AU022347|DIP1|GCIP|Maid|SECC-8|SSEC-8 cyclin D-type binding-protein 1 protein-coding common_peak1_94_812_-0.218641751799815_9.55779066617512_2.13778941773724 chr11 65787487 65788459 + 2.13778941773724 NA intron (NM_001316368, intron 1 of 10) CpG 386 NM_009157 26398 Mm.412922 NM_009157 ENSMUSG00000033352 Map2k4 JNKK1|MEK4|MKK4|PRKMK4|Sek1|Serk1 mitogen-activated protein kinase kinase 4 protein-coding unique_peak2_30_236_-0.422061044163953_7.67771272681628_2.13754771777951-2 chr6 88999549 89001174 + 2.13754771777951 NA Intergenic Intergenic -95754 NM_175017 232217 Mm.281744 NM_175017 ENSMUSG00000055403 4933427D06Rik - RIKEN cDNA 4933427D06 gene ncRNA common_peak2_30_236_-0.422061044163953_7.67771272681628_2.13754771777951 chr14 74732195 74733076 + 2.13754771777951 NA intron (NM_001285423, intron 1 of 8) CpG 338 NM_016903 13885 Mm.38055 NM_016903 ENSMUSG00000021996 Esd Es-10|Es10|FGH|sid478 esterase D/formylglutathione hydrolase protein-coding unique_peak2_30_236_-0.422061044163953_7.67771272681628_2.13754771777951 chr11 52313328 52315408 + 2.13754771777951 NA Intergenic CpG -31354 NM_001313981 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding unique_peak2_23_180_-0.486070418991111_7.25681067758765_2.13725206075851-2 chr13 113828286 113829283 + 2.13725206075851 NA intron (NM_172595, intron 1 of 4) intron (NM_172595, intron 1 of 4) 34276 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding unique_peak2_23_180_-0.486070418991111_7.25681067758765_2.13725206075851 chr13 38658412 38659179 + 2.13725206075851 NA intron (NM_025380, intron 1 of 3) CpG 233 NM_025380 66143 Mm.490319 NM_025380 ENSMUSG00000001707 Eef1e1 1110003A02Rik eukaryotic translation elongation factor 1 epsilon 1 protein-coding common_peak1_75_630_-0.247907369212946_9.17754251037608_2.13638469507886 chrX 166509689 166510456 + 2.13638469507886 NA intron (NM_001007577, intron 1 of 4) CpG 406 NM_001007577 245695 Mm.336318 NM_001007577 ENSMUSG00000051224 Tceanc A630018P17Rik|Gm390 transcription elongation factor A (SII) N-terminal and central domain containing protein-coding unique_peak2_25_98_0.526064624561323_6.89238893236027_2.13636046550847 chr14 69616863 69617666 + 2.13636046550847 NA intron (NM_033325, intron 1 of 13) intron (NM_033325, intron 1 of 13) 7788 NM_033325 94352 Mm.116714 NM_033325 ENSMUSG00000034205 Loxl2 1110004B06Rik|4930526G11Rik|9430067E15Rik lysyl oxidase-like 2 protein-coding common_peak1_25_98_0.526064624561323_6.89238893236027_2.13636046550847 chr8 122459710 122460321 + 2.13636046550847 NA intron (NM_013914, intron 1 of 2) intron (NM_013914, intron 1 of 2) 677 NM_013914 30927 Mm.103673 NM_013914 ENSMUSG00000006587 Snai3 AI643946|Smuc|Zfp293 snail family zinc finger 3 protein-coding common_peak1_138_981_0.182405566477909_10.0307819975536_2.13573254629599 chr11 60932011 60932948 + 2.13573254629599 NA promoter-TSS (NR_027800) promoter-TSS (NR_027800) 422 NM_008928 26397 Mm.18494 NM_008928 ENSMUSG00000018932 Map2k3 AW212142|MEK3|MKK3|Prkmk3|mMKK3b mitogen-activated protein kinase kinase 3 protein-coding common_peak1_26_103_0.521767848698503_6.96132364249034_2.13464076409964-4 chr6 86667308 86667818 + 2.13464076409964 NA intron (NM_010751, intron 2 of 5) intron (NM_010751, intron 2 of 5) 1596 NM_010751 17119 Mm.279580 NM_010751 ENSMUSG00000001156 Mxd1 AW122478|Mad|Mad1 MAX dimerization protein 1 protein-coding common_peak1_26_103_0.521767848698503_6.96132364249034_2.13464076409964 chr1 153740299 153740965 + 2.13464076409964 NA intron (NM_011267, intron 1 of 4) intron (NM_011267, intron 1 of 4) 279 NM_011267 19734 Mm.181709 NM_011267 ENSMUSG00000026475 Rgs16 Rgs14|Rgsr regulator of G-protein signaling 16 protein-coding common_peak1_19_149_-0.537684462865104_6.95997645906333_2.13464076409964 chr5 135711452 135711896 + 2.13464076409964 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 22529 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak1_26_103_0.521767848698503_6.96132364249034_2.13464076409964-2 chr19 29431146 29431661 + 2.13464076409964 NA intron (NM_021396, intron 2 of 5) intron (NM_021396, intron 2 of 5) 20484 NM_021396 58205 Mm.116737 NM_021396 ENSMUSG00000016498 Pdcd1lg2 B7-DC|Btdc|F730015O22Rik|PD-L2 programmed cell death 1 ligand 2 protein-coding common_peak1_26_103_0.521767848698503_6.96132364249034_2.13464076409964-3 chr4 101246712 101247365 + 2.13464076409964 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 18244 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding unique_peak2_8_69_-0.851209966258654_5.70367803381564_2.13461086968746-3 chr15 36606215 36606809 + 2.13461086968746 NA intron (NM_008774, intron 1 of 14) B1_Mur2|SINE|Alu 2461 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding unique_peak2_8_69_-0.851209966258654_5.70367803381564_2.13461086968746 chr1 36294646 36295172 + 2.13461086968746 NA Intergenic MTC|LTR|ERVL-MaLR -12824 NM_001290727 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding unique_peak2_8_69_-0.851209966258654_5.70367803381564_2.13461086968746-2 chr10 78284771 78285412 + 2.13461086968746 NA exon (NM_053014, exon 4 of 10) exon (NM_053014, exon 4 of 10) -40449 NM_001081055 216131 Mm.27539 NM_001081055 ENSMUSG00000000374 Trappc10 B230307C21Rik|Gm870|Tmem1 trafficking protein particle complex 10 protein-coding common_peak2_31_244_-0.413772364691047_7.72975175665705_2.13353206261508-2 chr9 62608498 62608782 + 2.13353206261508 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -69215 NM_176922 319480 Mm.34883 NM_176922 ENSMUSG00000032243 Itga11 4732459H24Rik integrin alpha 11 protein-coding common_peak2_31_244_-0.413772364691047_7.72975175665705_2.13353206261508 chr8 72207840 72208943 + 2.13353206261508 NA intron (NM_001080812, intron 2 of 4) RMER15|LTR|ERVL 4446 NM_001080812 234421 Mm.211247 NM_001080812 ENSMUSG00000074240 Cib3 C730014M21Rik|Gm1107|KIP3 calcium and integrin binding family member 3 protein-coding unique_peak2_31_244_-0.413772364691047_7.72975175665705_2.13353206261508 chr9 107950472 107951461 + 2.13353206261508 NA promoter-TSS (NM_011634) promoter-TSS (NM_011634) 3 NM_011634 22036 Mm.297870 NM_011634 ENSMUSG00000032586 Traip Trip TRAF-interacting protein protein-coding common_peak1_144_1319_-0.169553312854926_10.2815455578184_2.13339997593084 chr13 51766898 51769127 + 2.13339997593084 NA intron (NM_001281880, intron 1 of 16) (CA)n|Simple_repeat|Simple_repeat 25735 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_81_488_0.254364921299549_9.06087311560201_2.13327265269854-2 chr3 9832783 9833685 + 2.13327265269854 NA 5' UTR (NM_001195031, exon 1 of 9) 5' UTR (NM_001195031, exon 1 of 9) 445 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding common_peak1_81_488_0.254364921299549_9.06087311560201_2.13327265269854 chr14 25486884 25488534 + 2.13327265269854 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 28524 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_53_430_-0.302724181063148_8.60018196855752_2.13322699895348 chr3 60498680 60499637 + 2.13322699895348 NA intron (NM_001253713, intron 2 of 9) intron (NM_001253713, intron 2 of 9) -2021 NM_001253711 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_63_349_0.298266773665551_8.60034449866511_2.13322699895348 chr18 12955206 12956500 + 2.13322699895348 NA Intergenic Intergenic -14012 NM_207530 64291 Mm.259470 NM_020573 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|ORP-1|Osbpl1b oxysterol binding protein-like 1A protein-coding common_peak2_162_1208_0.164245914672247_10.3217214865852_2.13283285877219 chr10 120208280 120210298 + 2.13283285877219 NA intron (NM_026617, intron 1 of 6) intron (NM_026617, intron 1 of 6) 463 NM_026617 68212 Mm.157426 NM_026617 ENSMUSG00000020225 Tmbim4 0610007H07Rik|AU022431 transmembrane BAX inhibitor motif containing 4 protein-coding common_peak2_42_335_-0.346590252524809_8.21902229651636_2.13277783816992-2 chr2 126151486 126152837 + 2.13277783816992 NA promoter-TSS (NM_026981) promoter-TSS (NM_026981) 20 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak1_42_335_-0.346590252524809_8.21902229651636_2.13277783816992 chr19 47513018 47513669 + 2.13277783816992 NA non-coding (NR_045322, exon 2 of 3) non-coding (NR_045322, exon 2 of 3) 361 NR_045322 100503104 Mm.442735 NR_045322 ENSMUSG00000097990 Gm19557 - predicted gene, 19557 ncRNA common_peak2_42_335_-0.346590252524809_8.21902229651636_2.13277783816992 chr17 80631752 80633353 + 2.13277783816992 NA intron (NM_001290345, intron 13 of 33) intron (NM_001290345, intron 13 of 33) -68718 NM_001033443 381113 Mm.329216 NM_001033443 ENSMUSG00000033966 Cdkl4 AU067824|Gm942 cyclin-dependent kinase-like 4 protein-coding common_peak2_222_1811_0.135116633908169_10.8909255570003_2.13217672713353 chr11 88130544 88134150 + 2.13217672713353 NA intron (NM_198013, intron 1 of 10) MER5A1|DNA|hAT-Charlie 33201 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_32_252_-0.405673627033431_7.7801567611776_2.13077677925305 chr11 20332311 20333749 + 2.13077677925305 NA promoter-TSS (NM_018861) promoter-TSS (NM_018861) -317 NM_018861 55963 Mm.6379 NM_018861 ENSMUSG00000020142 Slc1a4 ASCT-1|ASCT1|AW045657|SATT solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 protein-coding common_peak2_131_1183_-0.178908795595358_10.1199989678313_2.13064260276216 chr14 57825320 57827144 + 2.13064260276216 NA promoter-TSS (NM_026401) promoter-TSS (NM_026401) -7 NM_026401 67840 Mm.319530 NM_026401 ENSMUSG00000021967 Mrpl57 2610025P17Rik|AV005697|Mrp63 mitochondrial ribosomal protein L57 protein-coding common_peak2_131_1183_-0.178908795595358_10.1199989678313_2.13064260276216-2 chr9 20887297 20888983 + 2.13064260276216 NA promoter-TSS (NM_145610) promoter-TSS (NM_145610) -35 NM_145610 235036 Mm.2930 NM_145610 ENSMUSG00000004100 Ppan A230087P06Rik|SSF1 peter pan homolog (Drosophila) protein-coding common_peak1_68_387_0.282682478059668_8.74125408121696_2.13043535759478 chr8 70522400 70523168 + 2.13043535759478 NA intron (NM_029366, intron 1 of 4) intron (NM_029366, intron 1 of 4) 396 NM_029366 75620 Mm.482129 NM_029366 ENSMUSG00000055553 Kxd1 0610030B01Rik|2810422J05Rik|C78305 KxDL motif containing 1 protein-coding common_peak1_70_584_-0.259133268623749_9.06272618015889_2.12984849874176 chr12 118376748 118377538 + 2.12984849874176 NA Intergenic Intergenic -75703 NM_001166385 20688 Mm.34699 NM_009239 ENSMUSG00000025323 Sp4 5730497N03Rik|HF-1b|HF1-b trans-acting transcription factor 4 protein-coding common_peak2_70_584_-0.259133268623749_9.06272618015889_2.12984849874176 chr6 113493787 113495395 + 2.12984849874176 NA exon (NM_001289699, exon 4 of 4) exon (NM_001289699, exon 4 of 4) 7227 NM_172487 210673 Mm.133060 NM_172487 ENSMUSG00000045009 Prrt3 6330505P20|B230206N24Rik proline-rich transmembrane protein 3 protein-coding common_peak2_200_1928_-0.138959211746098_10.8441578221761_2.12954073515717 chr1 193261635 193265130 + 2.12954073515717 NA intron (NM_008288, intron 1 of 6) intron (NM_008288, intron 1 of 6) 663 NM_008288 15483 Mm.28328 NM_008288 ENSMUSG00000016194 Hsd11b1 - hydroxysteroid 11-beta dehydrogenase 1 protein-coding common_peak2_33_260_-0.397757424409358_7.82902728436521_2.129157228191 chr11 102431699 102433341 + 2.129157228191 NA intron (NM_008175, intron 1 of 12) intron (NM_008175, intron 1 of 12) 2198 NM_008175 14824 Mm.1568 NM_008175 ENSMUSG00000034708 Grn Pgrn|epithelin granulin protein-coding common_peak1_49_249_0.346843218660654_8.13920589399241_2.12890472675124 chr11 107547941 107548709 + 2.12890472675124 NA intron (NM_198298, intron 1 of 31) CpG-2765 365 NM_198298 78455 Mm.272047 NM_198298 ENSMUSG00000020721 Helz 3110078M01Rik|9430093I07Rik|9630002H22Rik|AI851979|DRHC helicase with zinc finger domain protein-coding common_peak1_40_318_-0.355969348699444_8.13942793941515_2.12890472675114 chr9 46173945 46174825 + 2.12890472675114 NA intron (NM_027498, intron 4 of 24) MT2B|LTR|ERVL -54245 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding common_peak1_17_56_0.671795347707926_6.1687876880187_2.1280873638541-3 chrX 160994890 160995226 + 2.1280873638541 NA promoter-TSS (NM_001024624) promoter-TSS (NM_001024624) -377 NM_001024624 382253 Mm.443717 NM_001024624 ENSMUSG00000031292 Cdkl5 BC038161|Stk9 cyclin-dependent kinase-like 5 protein-coding common_peak1_17_56_0.671795347707926_6.1687876880187_2.1280873638541-2 chr19 40832079 40832490 + 2.1280873638541 NA intron (NM_172839, intron 2 of 5) intron (NM_172839, intron 2 of 5) 1005 NM_172839 240665 Mm.309 NM_172839 ENSMUSG00000025010 Ccnj D430039C20Rik cyclin J protein-coding common_peak1_17_56_0.671795347707926_6.1687876880187_2.1280873638541 chr11 60725837 60726248 + 2.1280873638541 NA intron (NM_001302207, intron 1 of 29) B1_Mus1|SINE|Alu 1221 NM_022009 14248 Mm.339755 NM_022009 ENSMUSG00000002812 Flii 3632430F08Rik|Fliih flightless I actin binding protein protein-coding unique_peak1_17_56_0.671795347707926_6.1687876880187_2.1280873638541 chr5 113908993 113909458 + 2.1280873638541 NA promoter-TSS (NM_011779) promoter-TSS (NM_011779) -519 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak2_38_301_-0.365461289717218_8.05567409446647_2.12783010225697-2 chr17 12782812 12784145 + 2.12783010225697 NA intron (NR_027784, intron 2 of 2) intron (NR_027784, intron 2 of 2) -13772 NM_010515 16004 Mm.26553 NM_010515 ENSMUSG00000023830 Igf2r AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300 insulin-like growth factor 2 receptor protein-coding common_peak2_38_301_-0.365461289717218_8.05567409446647_2.12783010225697 chr15 81096678 81098623 + 2.12783010225697 NA intron (NM_001082536, intron 2 of 13) intron (NM_001082536, intron 2 of 13) 7397 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak2_78_658_-0.242035563894735_9.24311687306068_2.1262787469383 chr7 45332468 45334408 + 2.1262787469383 NA exon (NM_175130, exon 2 of 25) exon (NM_175130, exon 2 of 25) 342 NM_175130 68667 Mm.439890 NM_175130 ENSMUSG00000038260 Trpm4 1110030C19Rik|AW047689|LTRPC4|LTrpC-4|TRPM4B transient receptor potential cation channel, subfamily M, member 4 protein-coding common_peak2_74_621_-0.250621061840937_9.15546023921014_2.12624004368514 chrX 19165380 19168008 + 2.12624004368514 NA Intergenic Intergenic -19723 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA common_peak1_148_1360_-0.165526349396373_10.3276881768058_2.12570575451396 chr18 31609022 31610210 + 2.12570575451396 NA exon (NM_026165, exon 1 of 8) exon (NM_026165, exon 1 of 8) 286 NM_026165 67453 Mm.23896 NM_026165 ENSMUSG00000024259 Slc25a46 1200007B05Rik|AI325987 solute carrier family 25, member 46 protein-coding common_peak1_37_293_-0.372695830253117_8.0133244297098_2.12497139743166-2 chr4 149099204 149099850 + 2.12497139743166 NA intron (NM_019781, intron 1 of 8) CpG 285 NM_019781 56273 Mm.184172 NM_019781 ENSMUSG00000028975 Pex14 Pex14p|R75137 peroxisomal biogenesis factor 14 protein-coding common_peak1_37_293_-0.372695830253117_8.0133244297098_2.12497139743166 chr17 34626847 34627443 + 2.12497139743166 NA promoter-TSS (NM_019441) promoter-TSS (NM_019441) 3 NM_019441 54397 Mm.373627 NM_019441 ENSMUSG00000015474 Ppt2 0610007M19Rik|AA672937 palmitoyl-protein thioesterase 2 protein-coding common_peak2_37_293_-0.372695830253117_8.0133244297098_2.12497139743166 chr2 155050219 155051416 + 2.12497139743166 NA 3' UTR (NM_015770, exon 4 of 4) 3' UTR (NM_015770, exon 4 of 4) 23680 NM_016661 269378 Mm.330692 NM_016661 ENSMUSG00000027597 Ahcy AA987153|AL024110|CuBP|SAHH S-adenosylhomocysteine hydrolase protein-coding common_peak2_21_76_0.59301120199905_6.56329214169443_2.12391301572952 chr7 58676998 58677901 + 2.12391301572952 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 19247 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak2_21_76_0.59301120199905_6.56329214169443_2.12391301572952-2 chrX 159708609 159709354 + 2.12391301572952 NA intron (NM_021389, intron 1 of 16) intron (NM_021389, intron 1 of 16) 380 NR_110970 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_21_76_0.59301120199905_6.56329214169443_2.12391301572952 chr2 90579218 90579710 + 2.12391301572952 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) 1183 NM_008982 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak2_21_76_0.59301120199905_6.56329214169443_2.12391301572952 chr10 67619792 67620575 + 2.12391301572952 NA Intergenic MTEb|LTR|ERVL-MaLR -71228 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak2_69_574_-0.259360120121848_9.03773808577081_2.12386173835867 chr4 46506583 46508990 + 2.12386173835867 NA intron (NM_029077, intron 5 of 5) (GAAAA)n|Simple_repeat|Simple_repeat 18457 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding common_peak2_89_763_-0.22463787928476_9.46510988839337_2.12352591451812 chr6 144918894 144920941 + 2.12352591451812 NA Intergenic Intergenic 128895 NM_001024468 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding common_peak2_111_979_-0.196848566611934_9.8382136556966_2.12295174470471 chr5 124336630 124340427 + 2.12295174470471 NA intron (NM_028310, intron 1 of 1) intron (NM_028310, intron 1 of 1) 10439 NM_001134717 72650 Mm.121658 NM_028310 ENSMUSG00000047635 2810006K23Rik - RIKEN cDNA 2810006K23 gene protein-coding common_peak2_84_513_0.246017298658613_9.12863319852319_2.12265650362773 chr4 152095447 152097419 + 2.12265650362773 NA promoter-TSS (NM_001285999) promoter-TSS (NM_001285999) -286 NM_001285999 269608 Mm.332102 NM_001004156 ENSMUSG00000039713 Plekhg5 BC023181|Syx pleckstrin homology domain containing, family G (with RhoGef domain) member 5 protein-coding common_peak2_105_919_-0.203135974314907_9.74392206378692_2.12260616930502 chr11 77077569 77079187 + 2.12260616930502 NA promoter-TSS (NR_030756) promoter-TSS (NR_030756) 59 NM_001012309 237859 Mm.156195 NM_001012309 ENSMUSG00000037958 Nsrp1 8030451K07|AI851076|AL022898|Ccdc55|NSpr70|NSrp70 nuclear speckle regulatory protein 1 protein-coding common_peak2_180_1706_-0.148040027551376_10.663227329252_2.12252078761481 chr2 152779423 152783689 + 2.12252078761481 NA 3' UTR (NM_001289717, exon 3 of 3) 3' UTR (NM_001289717, exon 3 of 3) 27383 NM_053091 84682 Mm.196668 NM_053091 ENSMUSG00000009876 Cox4i2 Cox4b|CoxIV-2 cytochrome c oxidase subunit IV isoform 2 protein-coding common_peak2_91_570_0.234338491103379_9.27451618091453_2.12208180184215 chr15 79228761 79229867 + 2.12208180184215 NA promoter-TSS (NM_001045558) promoter-TSS (NM_001045558) -68 NM_001045558 18693 Mm.259464 NM_008837 ENSMUSG00000068206 Pick1 Prkcabp protein interacting with C kinase 1 protein-coding common_peak2_260_2217_0.121888696657427_11.1759879984904_2.12133031551389 chr1 80380221 80385322 + 2.12133031551389 NA Intergenic L1MB8|LINE|L1 -42081 NM_016716 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding common_peak1_24_188_-0.476227232084689_7.32412880817873_2.12113248377296 chr9 63732837 63733386 + 2.12113248377296 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 24883 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_122_1090_-0.185857605104896_9.99850658377116_2.12094537905904 chr17 53689348 53690340 + 2.12094537905904 NA promoter-TSS (NM_028232) promoter-TSS (NM_028232) -529 NM_028232 72415 Mm.153202 NM_028232 ENSMUSG00000023940 Sgol1 3300001M08Rik|C81037|Sgo1 shugoshin-like 1 (S. pombe) protein-coding common_peak2_27_109_0.505205036493265_7.03396223177129_2.1207478721889 chr17 5238348 5239150 + 2.1207478721889 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 180018 NM_175349 106557 Mm.432764 NM_175349 ENSMUSG00000101959 Ldhal6b 4933402O15Rik|AI326310|LDHL|Ldhal lactate dehydrogenase A-like 6B protein-coding common_peak1_27_109_0.505205036493265_7.03396223177129_2.1207478721889 chr7 64057976 64058541 + 2.1207478721889 NA Intergenic Intergenic -95577 NM_001039104 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak2_64_529_-0.272934029117666_8.91338153489173_2.12069481677724 chr8 13757042 13758605 + 2.12069481677724 NA exon (NM_027276, exon 1 of 18) exon (NM_027276, exon 1 of 18) 133 NM_027276 69957 Mm.182412 NM_027276 ENSMUSG00000038416 Cdc16 2700071J12Rik|2810431D22Rik|APC6 CDC16 cell division cycle 16 protein-coding common_peak2_170_1286_0.158836897482757_10.4092147869621_2.12024223327276 chr12 82207537 82210731 + 2.12024223327276 NA intron (NM_001167983, intron 1 of 23) B3|SINE|B2 39118 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak2_16_127_-0.596463739025828_6.70176813048709_2.11986780665406 chr11 120234001 120235169 + 2.11986780665406 NA intron (NM_198423, intron 1 of 27) CpG 1638 NM_198423 268515 Mm.309498 NM_198423 ENSMUSG00000039741 Bahcc1 B930044J06|BC060615 BAH domain and coiled-coil containing 1 protein-coding unique_peak2_16_127_-0.596463739025828_6.70176813048709_2.11986780665406-4 chr6 85904434 85905111 + 2.11986780665406 NA 5' UTR (NM_029331, exon 1 of 4) 5' UTR (NM_029331, exon 1 of 4) 166 NM_029331 75541 Mm.24454 NM_029331 ENSMUSG00000068299 Nat8f4 1700019G17Rik N-acetyltransferase 8 (GCN5-related) family member 4 protein-coding unique_peak2_16_127_-0.596463739025828_6.70176813048709_2.11986780665406-2 chr19 46466694 46467770 + 2.11986780665406 NA intron (NM_015752, intron 8 of 11) intron (NM_015752, intron 8 of 11) -34416 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak2_16_127_-0.596463739025828_6.70176813048709_2.11986780665406-5 chr8 115069893 115071011 + 2.11986780665406 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 630800 NM_019573 80707 Mm.440420 NM_019573 ENSMUSG00000004637 Wwox 5330426P09Rik|9030416C10Rik|WOX1 WW domain-containing oxidoreductase protein-coding common_peak1_16_127_-0.596463739025828_6.70176813048709_2.11986780665406 chr9 65544019 65544395 + 2.11986780665406 NA Intergenic (CAAAA)n|Simple_repeat|Simple_repeat 35880 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding unique_peak2_16_127_-0.596463739025828_6.70176813048709_2.11986780665406-3 chr6 54963051 54964097 + 2.11986780665406 NA intron (NM_172729, intron 1 of 11) RSINE1|SINE|B4 8087 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_73_611_-0.250991880294885_9.13189190254521_2.1194099861115 chr12 111712260 111713999 + 2.1194099861115 NA promoter-TSS (NM_001163388) promoter-TSS (NM_001163388) 127 NM_027404 70369 Mm.44239 NM_027404 ENSMUSG00000049792 Bag5 1600025G07Rik|4930405J06Rik|Bag-5 BCL2-associated athanogene 5 protein-coding common_peak1_51_413_-0.311453401672036_8.53776025666331_2.11863844971107 chr19 4037261 4038092 + 2.11863844971107 NA intron (NM_013541, intron 1 of 6) intron (NM_013541, intron 1 of 6) 236 NM_013541 14870 Mm.299292 NM_013541 ENSMUSG00000060803 Gstp1 GstpiB glutathione S-transferase, pi 1 protein-coding common_peak2_51_413_-0.311453401672036_8.53776025666331_2.11863844971107 chr2 132815396 132816924 + 2.11863844971107 NA promoter-TSS (NM_175113) promoter-TSS (NM_175113) 19 NM_001291054 66634 Mm.157070 NM_025676 ENSMUSG00000027353 Mcm8 5730432L01Rik minichromosome maintenance 8 homologous recombination repair factor protein-coding common_peak1_81_686_-0.236110712566317_9.30611093253494_2.11840685441253 chr15 76242599 76243768 + 2.11840685441253 NA exon (NM_001163576, exon 1 of 10) exon (NM_001163576, exon 1 of 10) 257 NM_001163576 671535 Mm.373750 NM_001163575 ENSMUSG00000063268 Parp10 - poly (ADP-ribose) polymerase family, member 10 protein-coding common_peak1_186_1771_-0.144245214452994_10.7190402813285_2.11824954127229 chr1 36807302 36809330 + 2.11824954127229 NA exon (NM_018872, exon 31 of 41) exon (NM_018872, exon 31 of 41) 29332 NM_001289612 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak2_156_1151_0.167550632963337_10.253700317924_2.11819930766084 chr16 92782946 92786847 + 2.11819930766084 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 41178 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_252_2130_0.124527339438659_11.119578547502_2.11801895849229 chr6 125348797 125351132 + 2.11801895849229 NA 5' UTR (NM_011609, exon 1 of 10) 5' UTR (NM_011609, exon 1 of 10) 241 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding common_peak2_58_475_-0.289291358266118_8.75017208417488_2.11770460009023-2 chr7 108934318 108935385 + 2.11770460009023 NA intron (NM_025344, intron 1 of 7) intron (NM_025344, intron 1 of 7) 436 NM_025344 66085 Mm.182962 NM_025344 ENSMUSG00000031029 Eif3f 0610037M02Rik|AA409853|Eif3s5 eukaryotic translation initiation factor 3, subunit F protein-coding common_peak2_58_475_-0.289291358266118_8.75017208417488_2.11770460009023 chr7 28178996 28180727 + 2.11770460009023 NA promoter-TSS (NM_001271370) promoter-TSS (NM_001271370) 378 NM_010092 13549 Mm.57249 NM_010092 ENSMUSG00000002409 Dyrk1b Mirk dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b protein-coding common_peak2_55_291_0.323352502324264_8.35150081004215_2.11754384231508 chr13 54217702 54219529 + 2.11754384231508 NA intron (NM_001010973, intron 2 of 2) intron (NM_001010973, intron 2 of 2) 26486 NM_008286 15466 Mm.57243 NM_008286 ENSMUSG00000034987 Hrh2 - histamine receptor H2 protein-coding common_peak1_55_291_0.323352502324264_8.35150081004215_2.11754384231508 chr14 106024035 106025137 + 2.11754384231508 NA Intergenic Lx7|LINE|L1 -81612 NM_198601 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_63_519_-0.272889927530574_8.88592284926317_2.11615490985296 chr2 32281772 32283109 + 2.11615490985296 NA intron (NM_001290552, intron 2 of 4) intron (NM_001290552, intron 2 of 4) 5629 NR_110965 72931 Mm.27344 NM_175190 ENSMUSG00000044627 Swi5 1500019F05Rik|2900010J23Rik|AI046671 SWI5 recombination repair homolog (yeast) protein-coding common_peak1_71_410_0.274915400563696_8.82045228396353_2.11593315494653-2 chr13 113012728 113013705 + 2.11593315494653 NA Intergenic Intergenic 19348 NM_001037914 622408 Mm.360976 NM_001037914 ENSMUSG00000074651 Mcidas EG622408|Gm6320|Idas|Mci|Mcin multiciliate differentiation and DNA synthesis associated cell cycle protein protein-coding common_peak1_71_410_0.274915400563696_8.82045228396353_2.11593315494653 chr10 21992531 21993802 + 2.11593315494653 NA promoter-TSS (NM_001161850) promoter-TSS (NM_001161850) -724 NM_001161850 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_147_1349_-0.165735418354069_10.3158759827612_2.11577876200997 chr11 58301165 58303199 + 2.11577876200997 NA Intergenic tRNA-Glu-GAG_|tRNA|tRNA -4887 NM_182996 103836 Mm.41440 NM_182996 ENSMUSG00000037243 Zfp692 AI746306|AI839920|Zfp692-ps|Znf692 zinc finger protein 692 protein-coding common_peak1_77_649_-0.244740147121599_9.22192583435502_2.11572209980872 chr15 59794907 59795788 + 2.11572209980872 NA promoter-TSS (NR_045076) promoter-TSS (NR_045076) -388 NR_045076 100503021 Mm.402924 NR_045076 Gm19510 - predicted gene, 19510 ncRNA common_peak1_115_775_0.201975094698154_9.7009003895362_2.1152297617779 chr6 122819093 122820593 + 2.1152297617779 NA promoter-TSS (NM_021899) promoter-TSS (NM_021899) -341 NM_021899 60611 Mm.87142 NM_021899 ENSMUSG00000003154 Foxj2 Fhx forkhead box J2 protein-coding common_peak2_57_465_-0.288910518955355_8.7197308851766_2.11511802261776 chr9 107611877 107613563 + 2.11511802261776 NA Intergenic CpG -3479 NM_001291539 20347 Mm.4083 NM_009153 ENSMUSG00000057969 Sema3b SemA|Semaa|sema5|semaV sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B protein-coding common_peak2_217_2119_-0.13149400273457_10.9841015480833_2.11510576617111 chr5 147075578 147078413 + 2.11510576617111 NA promoter-TSS (NM_181730) promoter-TSS (NM_181730) -351 NM_181730 20018 Mm.317557 NM_009087 ENSMUSG00000029642 Polr1d 1110003G10Rik|AC19|RPA16|Rpo1-3 polymerase (RNA) I polypeptide D protein-coding common_peak2_68_565_-0.262062922585088_9.01362678153934_2.11456149704914 chr7 43561679 43563322 + 2.11456149704914 NA intron (NM_001008549, intron 1 of 4) intron (NM_001008549, intron 1 of 4) 130 NM_001008549 210104 Mm.333821 NM_001008549 ENSMUSG00000056592 Zfp658 - zinc finger protein 658 protein-coding common_peak2_225_2211_-0.129003860875949_11.0466337397967_2.1142978283467 chr7 127207229 127212466 + 2.1142978283467 NA Intergenic Intergenic -1379 NM_144522 68449 Mm.41420 NM_144522 ENSMUSG00000042492 Tbc1d10b 1110003P22Rik|C87963 TBC1 domain family, member 10b protein-coding common_peak1_124_1110_-0.183522322374388_10.0258819402019_2.11429521601145 chr7 75781115 75782757 + 2.11429521601145 NA Intergenic CpG -66402 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_50_404_-0.314107320644531_8.50472443744972_2.11424806927-2 chrX 20363953 20365351 + 2.11424806927 NA non-coding (NR_110967, exon 1 of 9) non-coding (NR_110967, exon 1 of 9) 171 NR_110967 19889 Mm.288141 NM_133669 ENSMUSG00000060090 Rp2 AI662636|Rp2h retinitis pigmentosa 2 homolog protein-coding common_peak2_50_404_-0.314107320644531_8.50472443744972_2.11424806927 chr1 171113209 171114762 + 2.11424806927 NA Intergenic Intergenic -7676 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak1_50_404_-0.314107320644531_8.50472443744972_2.11424806927 chr4 155734511 155735288 + 2.11424806927 NA promoter-TSS (NM_001101506) promoter-TSS (NM_001101506) 95 NM_001101506 381582 Mm.379515 NM_001101506 ENSMUSG00000084845 Tmem240 EG381582|Gm5151 transmembrane protein 240 protein-coding common_peak1_101_879_-0.207076625210847_9.67782140091924_2.11398072275215 chr5 140622981 140624140 + 2.11398072275215 NA intron (NM_001308040, intron 12 of 12) intron (NM_001308040, intron 12 of 12) 16219 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_106_696_0.21395557348735_9.5519926326121_2.11380802065111 chr3 40744708 40746267 + 2.11380802065111 NA promoter-TSS (NM_011020) promoter-TSS (NM_011020) -126 NM_011020 18415 Mm.39330 NM_011020 ENSMUSG00000025757 Hspa4l 94kDa|AI461691|APG-1|Osp94 heat shock protein 4 like protein-coding common_peak2_187_1454_0.149552272003085_10.5815795737972_2.11377183065146 chr3 41562952 41566393 + 2.11377183065146 NA promoter-TSS (NM_001130186) promoter-TSS (NM_001130186) -208 NM_001130186 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding common_peak1_192_1838_-0.141900471965679_10.7737555284291_2.11333349838954 chr5 134231189 134233544 + 2.11333349838954 NA Intergenic ZP3AR|Satellite|Satellite -2741 NR_104383 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak2_75_441_0.265686266378172_8.92074569258052_2.11318492229162 chr13 113012477 113013807 + 2.11318492229162 NA Intergenic L1MC1|LINE|L1 19274 NM_001037914 622408 Mm.360976 NM_001037914 ENSMUSG00000074651 Mcidas EG622408|Gm6320|Idas|Mci|Mcin multiciliate differentiation and DNA synthesis associated cell cycle protein protein-coding common_peak1_66_372_0.287511879894486_8.68678776020248_2.11293912487258 chr7 66373755 66374884 + 2.11293912487258 NA intron (NM_146191, intron 2 of 33) (TG)n|Simple_repeat|Simple_repeat 7405 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_83_505_0.2477056914769_9.10684642043276_2.11273839623817 chr7 34167849 34169041 + 2.11273839623817 NA promoter-TSS (NM_016682) promoter-TSS (NM_016682) 84 NM_016682 50995 Mm.27560 NM_016682 ENSMUSG00000052997 Uba2 AA986091|Arx|Sae2|UBA1|Ubl1a2|Uble1b ubiquitin-like modifier activating enzyme 2 protein-coding common_peak2_83_505_0.2477056914769_9.10684642043276_2.11273839623817 chr4 86668824 86670540 + 2.11273839623817 NA intron (NM_007408, intron 1 of 7) intron (NM_007408, intron 1 of 7) 377 NM_007408 11520 Mm.381 NM_007408 ENSMUSG00000028494 Plin2 AA407157|ADPH|Adfp|Adrp perilipin 2 protein-coding common_peak1_136_964_0.181952424379416_10.0053613443452_2.11209456147383 chr4 141209984 141211562 + 2.11209456147383 NA Intergenic RSINE1|SINE|B4 -3183 NM_001081174 76166 Mm.271064 NM_001081174 ENSMUSG00000073733 Rsg1 6330545A04Rik|Gm723 REM2 and RAB-like small GTPase 1 protein-coding common_peak2_46_229_0.357641036481643_8.0243105691852_2.11097351350991 chr13 84221831 84223010 + 2.11097351350991 NA non-coding (NR_029419, exon 1 of 12) non-coding (NR_029419, exon 1 of 12) 124 NM_175187 72745 Mm.295063 NM_175187 ENSMUSG00000035762 Tmem161b 2810446P07Rik|AI843389 transmembrane protein 161B protein-coding common_peak2_46_229_0.357641036481643_8.0243105691852_2.11097351350991-2 chr14 64639267 64640402 + 2.11097351350991 NA Intergenic Intergenic -12697 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding unique_peak2_46_229_0.357641036481643_8.0243105691852_2.11097351350991 chr4 32267197 32268825 + 2.11097351350991 NA Intergenic Intergenic -149424 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak2_54_284_0.326472909333811_8.31805456371901_2.11022202012575 chr15 86167945 86170148 + 2.11022202012575 NA intron (NM_145475, intron 1 of 12) intron (NM_145475, intron 1 of 12) 17095 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding common_peak1_28_115_0.490682319384996_7.10332215482007_2.10974668353604 chr8 69038505 69038956 + 2.10974668353604 NA 3' UTR (NM_153054, exon 17 of 17) 3' UTR (NM_153054, exon 17 of 17) -50006 NM_007509 11966 Mm.249096 NM_007509 ENSMUSG00000006273 Atp6v1b2 AI194269|AI790362|Atp6b2|HO57|R74844 ATPase, H+ transporting, lysosomal V1 subunit B2 protein-coding unique_peak2_28_115_0.490682319384996_7.10332215482007_2.10974668353604 chr9 30426936 30427633 + 2.10974668353604 NA promoter-TSS (NM_028874) promoter-TSS (NM_028874) -45 NM_028874 102607 Mm.35084 NM_028874 ENSMUSG00000031993 Snx19 3526401K03Rik|AI195321|AI848208|mKIAA0254 sorting nexin 19 protein-coding common_peak2_72_602_-0.253695165514456_9.10916660914286_2.10945993471262 chr1 13638723 13640807 + 2.10945993471262 NA intron (NM_145381, intron 3 of 6) intron (NM_145381, intron 3 of 6) 20744 NM_145381 212442 Mm.89572 NM_145381 ENSMUSG00000025937 Lactb2 Cgi-83|E430032H21Rik lactamase, beta 2 protein-coding common_peak2_118_1049_-0.189101242313841_9.94162299139656_2.10826244170796 chr8 122297407 122301000 + 2.10826244170796 NA intron (NM_009569, intron 1 of 9) intron (NM_009569, intron 1 of 9) 17062 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_25_196_-0.466630574815444_7.38873653204865_2.10774417828186-2 chr4 88776301 88776851 + 2.10774417828186 NA promoter-TSS (NM_001161609).5 promoter-TSS (NM_001161609).5 -186 NM_001243165 545647 Mm.380019 NM_001243165 ENSMUSG00000096582 Gm13289 OTTMUSG00000011290 predicted gene 13289 protein-coding common_peak1_25_196_-0.466630574815444_7.38873653204865_2.10774417828186 chr11 49008426 49009002 + 2.10774417828186 NA Intergenic Intergenic -16468 NM_011579 21822 Mm.15793 NM_011579 ENSMUSG00000078922 Tgtp1 Gtp2|Irgb6|Mg21|Tgtp T cell specific GTPase 1 protein-coding common_peak2_25_196_-0.466630574815444_7.38873653204865_2.10774417828186 chr7 97371453 97372256 + 2.10774417828186 NA intron (NM_199035, intron 1 of 12) intron (NM_199035, intron 1 of 12) 237 NM_199035 381903 Mm.279683 NM_199035 ENSMUSG00000035704 Alg8 AI447372|Gm1089 asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) protein-coding common_peak2_80_677_-0.238799380143465_9.28574177306461_2.10750421258684 chr7 47138930 47140829 + 2.10750421258684 NA Intergenic Intergenic -6195 NM_013643 19259 Mm.4654 NM_013643 ENSMUSG00000030854 Ptpn5 Step protein tyrosine phosphatase, non-receptor type 5 protein-coding common_peak2_1_0_2.6164163295661_1.30820816478305_2.10720996964787 chr17 47357314 47357525 + 2.10720996964787 NA intron (NM_001097623, intron 19 of 19) (GAATG)n|Simple_repeat|Simple_repeat -11468 NM_001146212 64657 Mm.216250 NM_183086 ENSMUSG00000034729 Mrps10 1110038B19Rik|AW743084|Rpms10 mitochondrial ribosomal protein S10 protein-coding common_peak1_26_203_-0.4502177751319_7.44731645440555_2.10702061489425 chr6 125426598 125427187 + 2.10702061489425 NA Intergenic Intergenic -46388 NM_198604 213522 Mm.333396 NM_198604 ENSMUSG00000038167 Plekhg6 BC026778|Gm155 pleckstrin homology domain containing, family G (with RhoGef domain) member 6 protein-coding common_peak1_20_157_-0.526306104378605_7.0406276959878_2.1069728492598 chr8 122184422 122184875 + 2.1069728492598 NA Intergenic Intergenic -97493 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_20_157_-0.526306104378605_7.0406276959878_2.1069728492598 chr11 100319126 100319755 + 2.1069728492598 NA promoter-TSS (NM_011508) promoter-TSS (NM_011508) -556 NM_011508 20918 Mm.13886 NM_011508 ENSMUSG00000035530 Eif1 Sui1-rs1 eukaryotic translation initiation factor 1 protein-coding unique_peak2_20_157_-0.526306104378605_7.0406276959878_2.1069728492598 chr16 13246494 13247613 + 2.1069728492598 NA Intergenic Intergenic -9428 NM_001122667 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding unique_peak2_20_157_-0.526306104378605_7.0406276959878_2.1069728492598-3 chrX 77508144 77509145 + 2.1069728492598 NA Intergenic Intergenic -2583 NM_020601 21372 Mm.258476 NM_020601 ENSMUSG00000025246 Tbl1x 5330429M20|Tbl1 transducin (beta)-like 1 X-linked protein-coding common_peak2_20_157_-0.526306104378605_7.0406276959878_2.1069728492598-2 chr6 30356848 30357844 + 2.1069728492598 NA Intergenic Intergenic 33664 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding unique_peak2_20_157_-0.526306104378605_7.0406276959878_2.1069728492598-2 chr18 35093535 35094490 + 2.1069728492598 NA Intergenic MTD|LTR|ERVL-MaLR -24900 NM_009818 12385 Mm.18962 NM_009818 ENSMUSG00000037815 Ctnna1 2010010M04Rik|AA517462|AI988031|Catna1 catenin (cadherin associated protein), alpha 1 protein-coding common_peak1_48_386_-0.319313519233726_8.43653299652755_2.10670090076574 chr8 105225112 105225953 + 2.10670090076574 NA intron (NM_145604, intron 1 of 15) intron (NM_145604, intron 1 of 15) 344 NM_145604 234678 Mm.27186 NM_145604 ENSMUSG00000031889 D230025D16Rik BC006874|Lin10 RIKEN cDNA D230025D16 gene protein-coding common_peak2_660_7195_0.0683499102425227_12.8471544263727_2.10584934685727 chr15 100662864 100670846 + 2.10584934685727 NA intron (NM_001270537, intron 1 of 10) intron (NM_001270537, intron 1 of 10) 2645 NM_001270537 668218 Mm.451225 NM_001270537 ENSMUSG00000098112 Bin2 - bridging integrator 2 protein-coding common_peak1_67_556_-0.264772633993148_8.98914720034346_2.10537747285742 chr14 66231334 66232223 + 2.10537747285742 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -18226 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_201_1596_0.142311907380579_10.7123045511015_2.10469678600887 chr9 70678151 70680280 + 2.10469678600887 NA exon (NM_007399, exon 1 of 16) exon (NM_007399, exon 1 of 16) 214 NM_007399 11487 Mm.3037 NM_007399 ENSMUSG00000054693 Adam10 1700031C13Rik|MADM|kuz|kuzbanian a disintegrin and metallopeptidase domain 10 protein-coding common_peak2_60_328_0.302575677311731_8.51323161239111_2.10432920440224 chr14 106023826 106025271 + 2.10432920440224 NA Intergenic Lx7|LINE|L1 -81650 NM_198601 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak2_173_1316_0.156370511595695_10.4412248860544_2.10399887261619 chr11 97743429 97745874 + 2.10399887261619 NA promoter-TSS (NM_054051) promoter-TSS (NM_054051) 53 NM_054051 108083 Mm.39700 NM_054051 ENSMUSG00000018547 Pip4k2b AI848124|PI5P4Kbeta|Pip5k2b|c11 phosphatidylinositol-5-phosphate 4-kinase, type II, beta protein-coding common_peak2_297_2627_0.111787752971647_11.4156434368082_2.10352626810402 chr5 33650644 33653315 + 2.10352626810402 NA exon (NM_009193, exon 2 of 8) exon (NM_009193, exon 2 of 8) 595 NM_001289724 20492 Mm.4172 NM_009193 ENSMUSG00000004642 Slbp - stem-loop binding protein protein-coding common_peak2_53_277_0.329878805302444_8.28388047537473_2.10324473119331 chr2 30967093 30968150 + 2.10324473119331 NA intron (NM_144884, intron 1 of 4) CpG 297 NM_144884 30931 Mm.154994 NM_144884 ENSMUSG00000026849 Tor1a DQ2|Dyt1|torsinA torsin family 1, member A (torsin A) protein-coding common_peak1_53_277_0.329878805302444_8.28388047537473_2.10324473119331 chr11 21178256 21179340 + 2.10324473119331 NA Intergenic Intergenic -60234 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak2_103_899_-0.205135324203393_9.71121352911534_2.10224973804661 chr11 117809192 117811070 + 2.10224973804661 NA intron (NM_009304, intron 1 of 3) CpG 464 NM_009304 20973 Mm.468228 NM_009304 ENSMUSG00000048277 Syngr2 Clast2|cellugyrin synaptogyrin 2 protein-coding common_peak2_122_837_0.194771347519358_9.80819210745903_2.10198195821023 chr4 141077212 141078618 + 2.10198195821023 NA intron (NM_025383, intron 1 of 7) CpG 430 NM_025383 66147 Mm.21187 NM_025383 ENSMUSG00000028923 Necap2 1110005F07Rik|AA409105|C78898 NECAP endocytosis associated 2 protein-coding common_peak1_105_688_0.213993903925177_9.53535712466688_2.10194553376889 chr14 54064064 54065716 + 2.10194553376889 NA Intergenic Intergenic 189039 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_78_465_0.257912946459037_8.9931426178838_2.10183686358303 chrX 12133247 12134205 + 2.10183686358303 NA TTS (NR_045434) TTS (NR_045434) 26620 NR_045434 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak2_148_1359_-0.164465934030082_10.3271579691227_2.10165193741788 chr17 12915215 12917329 + 2.10165193741788 NA promoter-TSS (NM_001290712) promoter-TSS (NM_001290712) -57 NM_001290712 21454 Mm.229342 NM_013686 ENSMUSG00000068039 Tcp1 AI528772|CCT|Cct1|Ccta|TRic|Tcp-1|Tp63|c-cpn|p63 t-complex protein 1 protein-coding common_peak2_140_1001_0.178598810384095_10.0579661983873_2.10131372674563 chr6 54859527 54862212 + 2.10131372674563 NA intron (NM_199143, intron 1 of 4) MTD|LTR|ERVL-MaLR 43953 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_83_705_-0.23282510709997_9.3471118197212_2.10130040299973 chr5 123379031 123380385 + 2.10130040299973 NA Intergenic Intergenic -15090 NM_177582 208104 Mm.83277 NM_133917 ENSMUSG00000038342 Mlxip AW228700|Mir|bHLHe36 MLX interacting protein protein-coding common_peak1_29_121_0.477919095034816_7.1696968850803_2.1012453815805 chr13 59509738 59510452 + 2.1012453815805 NA intron (NM_001284219, intron 10 of 24) intron (NM_001284219, intron 10 of 24) 34356 NM_001284221 67269 Mm.153008 NM_023328 ENSMUSG00000021557 Agtpbp1 1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd ATP/GTP binding protein 1 protein-coding common_peak1_120_1069_-0.186828236653062_9.96998096296198_2.10094760926918 chr8 107055818 107056767 + 2.10094760926918 NA promoter-TSS (NR_028367) promoter-TSS (NR_028367) 445 NM_139229 97484 Mm.288641 NM_139229 ENSMUSG00000031916 Cog8 BB235941|C87832 component of oligomeric golgi complex 8 protein-coding common_peak1_225_1844_0.132726708411001_10.9157684551533_2.10090109434845 chr11 118134949 118137439 + 2.10090109434845 NA Intergenic Intergenic -6975 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding unique_peak2_7_62_-0.907638971561105_5.52346043771936_2.10043913593602-2 chr7 19295654 19296108 + 2.10043913593602 NA 3' UTR (NM_001025364, exon 7 of 7) 3' UTR (NM_001025364, exon 7 of 7) 4812 NM_001025364 20167 Mm.24142 NM_013648 ENSMUSG00000030401 Rtn2 MMS10-P|Ms10p|NSPLI|Nspl1 reticulon 2 (Z-band associated protein) protein-coding unique_peak2_7_62_-0.907638971561105_5.52346043771936_2.10043913593602 chr2 22721479 22721945 + 2.10043913593602 NA Intergenic Intergenic -52615 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak2_159_1180_0.165177911792687_10.2883822052935_2.10025139264019 chr8 72547240 72549469 + 2.10025139264019 NA promoter-TSS (NM_027485) promoter-TSS (NM_027485) -44 NM_027485 70625 Mm.235885 NM_027485 ENSMUSG00000045248 Med26 5730493L18Rik|AI414941|AW495270|Crsp7 mediator complex subunit 26 protein-coding unique_peak2_14_112_-0.63813484100384_6.50111154191327_2.09979676679656 chr16 22548056 22549084 + 2.09979676679656 NA intron (NM_138650, intron 20 of 24) intron (NM_138650, intron 20 of 24) -16386 NR_106170 102465887 NR_106170 ENSMUSG00000099071 Mir8095 Gm27566|mmu-mir-8095 microRNA 8095 ncRNA common_peak1_79_667_-0.239345442470563_9.26403157123877_2.09957248171522 chr3 142545163 142546575 + 2.09957248171522 NA exon (NM_001083312, exon 10 of 11) exon (NM_001083312, exon 10 of 11) -14183 NM_018734 55932 Mm.439718 NM_018734 ENSMUSG00000028268 Gbp3 AW228655|GBP-3|GBP-4|Gbp4 guanylate binding protein 3 protein-coding common_peak2_243_2418_-0.122450980560242_11.1789695636998_2.09939443071618 chr8 64945672 64948795 + 2.09939443071618 NA promoter-TSS (NM_001163747) promoter-TSS (NM_001163747) 48 NM_028427 73067 Mm.294445 NM_028427 ENSMUSG00000025521 Tmem192 3110005G23Rik transmembrane protein 192 protein-coding common_peak1_241_2395_-0.123233036966981_11.1647956743053_2.09852814996662 chr8 4324289 4326131 + 2.09852814996662 NA promoter-TSS (NR_033527) promoter-TSS (NR_033527) 0 NR_033527 20300 Mm.7275 NM_009138 ENSMUSG00000023235 Ccl25 A130072A22Rik|AI852536|CKb15|Scya25|TECK chemokine (C-C motif) ligand 25 protein-coding common_peak1_43_209_0.372164536214185_7.90032778577321_2.09799186873814 chr12 102622453 102623238 + 2.09799186873814 NA intron (NM_172584, intron 3 of 9) intron (NM_172584, intron 3 of 9) 62175 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_18_61_0.646167893010015_6.27728025689188_2.0979277312568-3 chr16 52199607 52200048 + 2.0979277312568 NA intron (NM_001033238, intron 17 of 17) intron (NM_001033238, intron 17 of 17) 168278 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_18_61_0.646167893010015_6.27728025689188_2.0979277312568-4 chr9 118512849 118513217 + 2.0979277312568 NA intron (NM_018748, intron 1 of 23) intron (NM_018748, intron 1 of 23) 6715 NM_018748 54214 Mm.10409 NM_018748 ENSMUSG00000038708 Golga4 AI225887|AU019508|Olp-1 golgi autoantigen, golgin subfamily a, 4 protein-coding common_peak1_18_61_0.646167893010015_6.27728025689188_2.0979277312568 chr12 54999844 55000219 + 2.0979277312568 NA Intergenic B4A|SINE|B4 -13695 NM_013815 217578 Mm.479583 NM_013815 ENSMUSG00000035021 Baz1a Acf1|B930060C03|BC065123|Gtl5|Wcrf180|cbp146 bromodomain adjacent to zinc finger domain 1A protein-coding unique_peak1_18_61_0.646167893010015_6.27728025689188_2.0979277312568-2 chr2 119799767 119800221 + 2.0979277312568 NA intron (NM_019392, intron 1 of 18) CpG 480 NM_019392 22174 Mm.2901 NM_019392 ENSMUSG00000027298 Tyro3 AI323366|Brt|Dtk|Etk-2|Rse|Sky|TK19-2|Tif|etk2/tyro3|tk19-1 TYRO3 protein tyrosine kinase 3 protein-coding common_peak1_18_61_0.646167893010015_6.27728025689188_2.0979277312568-2 chr14 121407330 121407713 + 2.0979277312568 NA Intergenic B1F2|SINE|Alu -28291 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding unique_peak1_18_61_0.646167893010015_6.27728025689188_2.0979277312568 chr10 86848920 86849376 + 2.0979277312568 NA intron (NM_138673, intron 63 of 68) intron (NM_138673, intron 63 of 68) 70143 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding unique_peak2_10_83_-0.759131991271165_6.01275142714318_2.09773305436614 chr15 59653051 59653731 + 2.09773305436614 NA intron (NM_144549, intron 2 of 2) intron (NM_144549, intron 2 of 2) 4737 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding unique_peak2_10_83_-0.759131991271165_6.01275142714318_2.09773305436614-3 chr2 84798705 84799436 + 2.09773305436614 NA intron (NM_019949, intron 1 of 3) intron (NM_019949, intron 1 of 3) 242 NM_019949 56791 Mm.38261 NM_019949 ENSMUSG00000027078 Ube2l6 2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8 ubiquitin-conjugating enzyme E2L 6 protein-coding unique_peak2_10_83_-0.759131991271165_6.01275142714318_2.09773305436614-4 chr6 16359337 16360126 + 2.09773305436614 NA Intergenic ORR1A4|LTR|ERVL-MaLR 538710 NM_031198 21426 Mm.36217 NM_031198 ENSMUSG00000029553 Tfec BB107417|Tcfec|bHLHe34 transcription factor EC protein-coding unique_peak2_10_83_-0.759131991271165_6.01275142714318_2.09773305436614-2 chr2 36230425 36231042 + 2.09773305436614 NA exon (NM_008969, exon 2 of 11) exon (NM_008969, exon 2 of 11) 307 NM_008969 19224 Mm.275434 NM_008969 ENSMUSG00000047250 Ptgs1 COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1 prostaglandin-endoperoxide synthase 1 protein-coding common_peak2_423_4112_0.0896033425017979_12.0507770277513_2.09766595541132 chr3 136668713 136672637 + 2.09766595541132 NA 5' UTR (NM_008913, exon 1 of 14) 5' UTR (NM_008913, exon 1 of 14) 609 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding common_peak1_27_211_-0.441355704545273_7.50724260229056_2.09762823493747 chr13 32801351 32801906 + 2.09762823493747 NA promoter-TSS (NM_030215) promoter-TSS (NM_030215) -402 NM_030215 78903 Mm.286680 NM_030215 ENSMUSG00000021400 Wrnip1 4833444L21Rik|WHIP|Wrnip Werner helicase interacting protein 1 protein-coding common_peak1_42_202_0.380391253068774_7.85553154371956_2.09758411939261 chr17 70987155 70987980 + 2.09758411939261 NA intron (NM_023402, intron 1 of 3) B4A|SINE|B4 2949 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak1_42_202_0.380391253068774_7.85553154371956_2.09758411939261-2 chr7 41599121 41599864 + 2.09758411939261 NA Intergenic Intergenic -34039 NM_023363 67607 Mm.384626 NM_023363 ENSMUSG00000074165 Zfp788 2810426N06Rik|AI256342|AI605193 zinc finger protein 788 protein-coding common_peak2_207_2005_-0.134847712412181_10.9026820344061_2.09710763257582 chr11 58953460 58956085 + 2.09710763257582 NA promoter-TSS (NM_178218) promoter-TSS (NM_178218) 87 NM_178218 319162 Mm.212549 NM_178218 ENSMUSG00000078851 Hist3h2a - histone cluster 3, H2a protein-coding unique_peak2_21_164_-0.506524471551865_7.11305997846988_2.09669783590235-2 chr7 46833015 46834100 + 2.09669783590235 NA Intergenic Intergenic -12247 NM_010699 16828 Mm.29324 NM_010699 ENSMUSG00000063229 Ldha Ldh1|Ldhm|l7R2 lactate dehydrogenase A protein-coding unique_peak2_21_164_-0.506524471551865_7.11305997846988_2.09669783590235 chr13 92664480 92665754 + 2.09669783590235 NA intron (NM_172588, intron 2 of 11) intron (NM_172588, intron 2 of 11) 53979 NM_172588 218442 Mm.297970 NM_172588 ENSMUSG00000021703 Serinc5 A130038L21Rik|AIGP3|C86123|TPO1 serine incorporator 5 protein-coding common_peak1_21_164_-0.506524471551865_7.11305997846988_2.09669783590235 chr7 98693059 98693598 + 2.09669783590235 NA Intergenic Intergenic -10035 NM_028410 72981 Mm.4428 NM_028410 ENSMUSG00000030753 Thap12 2900052B10Rik|Dap4|Prkrir|Rpkrir THAP domain containing 12 protein-coding common_peak2_21_164_-0.506524471551865_7.11305997846988_2.09669783590235 chr17 56997128 56997850 + 2.09669783590235 NA exon (NM_027372, exon 1 of 3) exon (NM_027372, exon 1 of 3) 150 NM_027372 66400 Mm.196150 NM_025538 ENSMUSG00000002661 Alkbh7 2310045B01Rik|2510008E23Rik|Abh7|Spata11 alkB homolog 7 protein-coding unique_peak2_17_134_-0.572130235178164_6.79075047946175_2.09652212710692-2 chrX 12155418 12156347 + 2.09652212710692 NA intron (NR_045434, intron 1 of 3) CpG 4464 NR_045434 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding unique_peak2_17_134_-0.572130235178164_6.79075047946175_2.09652212710692 chr3 135607094 135607915 + 2.09652212710692 NA intron (NM_008689, intron 13 of 24) intron (NM_008689, intron 13 of 24) 84043 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_157_1455_-0.159083237899024_10.4282530212492_2.096480874174 chr14 55603097 55605466 + 2.096480874174 NA promoter-TSS (NM_001159418) promoter-TSS (NM_001159418) 296 NM_001159417 16391 Mm.2032 NM_008394 ENSMUSG00000002325 Irf9 Irf-9|Isgf3g|p48 interferon regulatory factor 9 protein-coding common_peak1_54_438_-0.296786111149443_8.62968407396064_2.09622281948368 chr4 6216445 6217413 + 2.09622281948368 NA 3' UTR (NM_026534, exon 8 of 8) 3' UTR (NM_026534, exon 8 of 8) 25824 NM_026534 68053 Mm.404043 NM_026534 ENSMUSG00000028243 Ubxn2b 3110003A22Rik|6430407D20Rik|AI451665|p37 UBX domain protein 2B protein-coding common_peak2_154_1133_0.167582866670399_10.2309963582774_2.09561941324601 chr5 100497690 100500662 + 2.09561941324601 NA promoter-TSS (NM_001115010) promoter-TSS (NM_001115010) -603 NM_001115010 231506 Mm.212568 NM_172714 ENSMUSG00000035310 Lin54 AI461788 lin-54 homolog (C. elegans) protein-coding common_peak2_46_369_-0.328250373090295_8.36725627397117_2.09556624243534-2 chr9 21167253 21169162 + 2.09556624243534 NA TTS (NR_106127) TTS (NR_106127) 2493 NM_183408 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding common_peak2_46_369_-0.328250373090295_8.36725627397117_2.09556624243534 chr6 92213925 92215319 + 2.09556624243534 NA intron (NM_030081, intron 1 of 11) CpG 189 NM_030081 78287 Mm.290734 NM_030081 ENSMUSG00000014550 Rbsn 5330426D11Rik|Zfyve20 rabenosyn, RAB effector protein-coding common_peak1_46_369_-0.328250373090295_8.36725627397117_2.09556624243534 chr15 79670749 79671426 + 2.09556624243534 NA intron (NM_172609, intron 1 of 3) CpG 219 NM_172609 223696 Mm.246435 NM_172609 ENSMUSG00000022427 Tomm22 2310047D01|Tom22 translocase of outer mitochondrial membrane 22 homolog (yeast) protein-coding common_peak2_130_1171_-0.177669592575375_10.1059220581346_2.09531187198086 chr6 129035571 129038836 + 2.09531187198086 NA Intergenic Intergenic -8698 NR_024262 232408 Mm.259262 NM_153094 ENSMUSG00000030154 Klrb1f A630024B12Rik|Nkr-p1f|Nkrp1-f|Nkrp1f killer cell lectin-like receptor subfamily B member 1F protein-coding common_peak1_122_1089_-0.184534638445578_9.9978451004415_2.09412412803432 chr10 21904937 21906823 + 2.09412412803432 NA intron (NM_001161845, intron 1 of 13) intron (NM_001161845, intron 1 of 13) 23696 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding unique_peak2_22_82_0.563421372746586_6.65675011772022_2.09370219286115 chr6 54495185 54495924 + 2.09370219286115 NA intron (NM_001167860, intron 6 of 7) intron (NM_001167860, intron 6 of 7) 42671 NM_001167861 330319 Mm.434326 NM_001167860 ENSMUSG00000086040 Wipf3 9030621G03|BQ952480 WAS/WASL interacting protein family, member 3 protein-coding common_peak1_22_82_0.563421372746586_6.65675011772022_2.09370219286115 chr6 125238024 125238555 + 2.09370219286115 NA intron (NR_015604, intron 1 of 1) intron (NR_015604, intron 1 of 1) -1262 NM_001286753 21940 Mm.367714 NM_001033126 ENSMUSG00000030336 Cd27 S152|Tnfrsf7|Tp55 CD27 antigen protein-coding common_peak1_22_82_0.563421372746586_6.65675011772022_2.09370219286115-2 chrX 85871662 85872184 + 2.09370219286115 NA intron (NM_001163539, intron 1 of 1) B1F1|SINE|Alu 1650 NM_001163539 71398 Mm.185296 NM_001163539 ENSMUSG00000025058 5430427O19Rik - RIKEN cDNA 5430427O19 gene protein-coding common_peak2_152_1402_-0.162494000339159_10.3730522934503_2.09276858518308 chr14 77869382 77872739 + 2.09276858518308 NA intron (NM_025384, intron 1 of 5) MTEa|LTR|ERVL-MaLR 3857 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding common_peak1_206_1647_0.14022930921686_10.7566151817916_2.09265761691311 chr9 108489787 108491877 + 2.09265761691311 NA TTS (NM_008483) TTS (NM_008483) 156 NM_027804 71472 Mm.289706 NM_027804 ENSMUSG00000006676 Usp19 8430421I07Rik|AI047774|Zmynd9 ubiquitin specific peptidase 19 protein-coding common_peak1_289_2964_-0.110435176856122_11.4785988010053_2.09190870674029 chr9 32695163 32698245 + 2.09190870674029 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 662 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_44_351_-0.333252981072665_8.29280512810096_2.09175170105365 chr10 34206549 34207412 + 2.09175170105365 NA intron (NM_172508, intron 1 of 5) CpG 571 NM_172508 212898 Mm.34557 NM_172508 ENSMUSG00000039497 Dse 6030499O08|AI480506|B130024B19Rik|DS-epi1|Sart2 dermatan sulfate epimerase protein-coding common_peak2_44_351_-0.333252981072665_8.29280512810096_2.09175170105365 chr4 132328798 132330253 + 2.09175170105365 NA promoter-TSS (NM_027925) promoter-TSS (NM_027925) 13 NM_027925 71787 Mm.239183 NM_027925 ENSMUSG00000028898 Trnau1ap 1110007F05Rik|AA387999|Secp43|Trspap1|WI1-2643G14.2 tRNA selenocysteine 1 associated protein 1 protein-coding common_peak1_64_358_0.289074486509845_8.63237727707797_2.0917023119536 chr3 88324758 88325575 + 2.0917023119536 NA exon (NM_020003, exon 1 of 6) exon (NM_020003, exon 1 of 6) 143 NM_020003 56700 Mm.439922 NM_020003 ENSMUSG00000001418 Glmp 0610031J06Rik|AB027141|NCU-G1 glycosylated lysosomal membrane protein protein-coding unique_peak2_40_189_0.391587656734478_7.76564943669819_2.09142611127349 chr3 136687781 136688852 + 2.09142611127349 NA intron (NM_001293622, intron 1 of 12) intron (NM_001293622, intron 1 of 12) 18250 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding common_peak2_40_189_0.391587656734478_7.76564943669819_2.09142611127349 chr4 53825939 53827002 + 2.09142611127349 NA intron (NM_028053, intron 1 of 5) intron (NM_028053, intron 1 of 5) 425 NM_028053 52076 Mm.27184 NM_028053 ENSMUSG00000028420 Tmem38b 1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b transmembrane protein 38B protein-coding common_peak2_40_189_0.391587656734478_7.76564943669819_2.09142611127349-2 chr7 117486308 117487530 + 2.09142611127349 NA intron (NM_175645, intron 2 of 11) intron (NM_175645, intron 2 of 11) 105940 NM_175645 233781 Mm.461427 NM_175645 ENSMUSG00000030657 Xylt1 8030490L12 xylosyltransferase 1 protein-coding common_peak1_110_732_0.206248779230885_9.62079377774925_2.09095739695527 chrX 160501624 160502929 + 2.09095739695527 NA promoter-TSS (NM_001177878) promoter-TSS (NM_001177878) 110 NM_001177879 110094 Mm.350712 NM_172783 ENSMUSG00000031295 Phka2 6330505C01Rik|D330034O08|Phk phosphorylase kinase alpha 2 protein-coding common_peak1_165_1238_0.161157708214102_10.3555393262477_2.09088668235253 chr10 78574385 78575589 + 2.09088668235253 NA intron (NM_173751, intron 1 of 15) CpG 487 NM_173751 216136 Mm.2644 NM_173751 ENSMUSG00000032763 Ilvbl 5830463I21|AI415009 ilvB (bacterial acetolactate synthase)-like protein-coding common_peak1_31_133_0.456776383853752_7.29447738238465_2.09050018049601 chr11 79129503 79130097 + 2.09050018049601 NA intron (NM_013571, intron 1 of 17) intron (NM_013571, intron 1 of 17) 16554 NM_013571 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb kinase suppressor of ras 1 protein-coding common_peak1_31_133_0.456776383853752_7.29447738238465_2.09050018049601-2 chr11 90227727 90228479 + 2.09050018049601 NA Intergenic Intergenic -21373 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding unique_peak2_41_196_0.382035135528478_7.81306938722062_2.09013520164657 chr7 24838049 24839647 + 2.09013520164657 NA intron (NR_045096, intron 10 of 11) intron (NR_045096, intron 10 of 11) 20053 NR_045096 545936 Mm.376228 NR_045096 ENSMUSG00000011350 Gm5893 EG545936|Gm477 predicted gene 5893 pseudo common_peak1_28_219_-0.432696399012092_7.56501151401861_2.0901243748632-2 chr4 132974782 132975351 + 2.0901243748632 NA intron (NM_010208, intron 1 of 12) intron (NM_010208, intron 1 of 12) 971 NM_010208 14191 Mm.271665 NM_010208 ENSMUSG00000028874 Fgr - FGR proto-oncogene, Src family tyrosine kinase protein-coding common_peak1_28_219_-0.432696399012092_7.56501151401861_2.0901243748632-3 chr7 75786540 75787096 + 2.0901243748632 NA Intergenic LTRIS4A|LTR|ERV1 -61520 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_28_219_-0.432696399012092_7.56501151401861_2.0901243748632 chr13 21750192 21750683 + 2.0901243748632 NA exon (NM_178211, exon 1 of 1) exon (NM_178211, exon 1 of 1) 116 NM_178211 319160 Mm.255646 NM_178211 ENSMUSG00000064288 Hist1h4k - histone cluster 1, H4k protein-coding unique_peak2_28_219_-0.432696399012092_7.56501151401861_2.0901243748632 chr3 97680681 97682003 + 2.0901243748632 NA Intergenic Intergenic 9220 NR_106084 102466229 NR_106084 ENSMUSG00000098381 Mir7225 Gm27499|mmu-mir-7225 microRNA 7225 ncRNA common_peak2_305_3158_-0.106834617279777_11.571834913107_2.08993945487893 chr7 4148011 4150823 + 2.08993945487893 NA exon (NM_175529, exon 1 of 1) exon (NM_175529, exon 1 of 1) 455 NM_175529 243813 Mm.347643 NM_175529 ENSMUSG00000043432 Leng9 9530024C23Rik|F630035L11Rik leukocyte receptor cluster (LRC) member 9 protein-coding common_peak1_116_1028_-0.189949301132824_9.91205261632756_2.08853397469161 chr19 41331402 41333275 + 2.08853397469161 NA exon (NM_031376, exon 3 of 17) exon (NM_031376, exon 3 of 17) 52732 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_32_139_0.448036930715913_7.35330148230292_2.08775878471017-2 chr6 38433203 38433756 + 2.08775878471017 NA promoter-TSS (NM_177185) promoter-TSS (NM_177185) -446 NM_177185 320538 Mm.302831 NM_177185 ENSMUSG00000038538 Ubn2 2900060J04Rik|6030408G03Rik|BC060116|D130059P03Rik|mKIAA2030 ubinuclein 2 protein-coding common_peak1_32_139_0.448036930715913_7.35330148230292_2.08775878471017 chr2 91834432 91835036 + 2.08775878471017 NA intron (NM_001080754, intron 12 of 18) intron (NM_001080754, intron 12 of 18) -87455 NM_007699 12672 Mm.330405 NM_007699 ENSMUSG00000040495 Chrm4 Chrm-4|M4 cholinergic receptor, muscarinic 4 protein-coding common_peak2_32_139_0.448036930715913_7.35330148230292_2.08775878471017 chr1 161396523 161397379 + 2.08775878471017 NA intron (NM_009452, intron 1 of 2) intron (NM_009452, intron 1 of 2) 1513 NM_009452 22164 Mm.4994 NM_009452 ENSMUSG00000026700 Tnfsf4 Ath-1|Ath1|CD134L|OX-40L|Ox40l|TXGP1|Tnlg2b|Txgp1l|gp34 tumor necrosis factor (ligand) superfamily, member 4 protein-coding common_peak2_92_791_-0.21853989919202_9.5200866704836_2.08766895013483 chr15 3170998 3175045 + 2.08766895013483 NA Intergenic Intergenic -97746 NM_001042613 20363 Mm.392203 NM_009155 ENSMUSG00000064373 Selenop AU018766|D15Ucla1|Se-P|Sepp1|selp selenoprotein P protein-coding common_peak1_69_573_-0.256848900965798_9.03648247619279_2.08693289911499 chr9 108078611 108079506 + 2.08693289911499 NA 5' UTR (NM_001311152, exon 1 of 39) 5' UTR (NM_001311152, exon 1 of 39) 243 NM_001311152 84585 Mm.379272 NM_032543 ENSMUSG00000041528 Rnf123 BC003945|Kpc1 ring finger protein 123 protein-coding common_peak2_34_151_0.433518201079949_7.46468661398356_2.08656973139603 chr1 69759243 69760404 + 2.08656973139603 NA Intergenic Intergenic -67147 NM_029160 66722 Mm.440554 NM_025728 ENSMUSG00000053153 Spag16 4921511D23Rik|4930524F24Rik|4930585K05Rik|AV261009|Pf20|Wdr29 sperm associated antigen 16 protein-coding common_peak1_33_145_0.44032401328051_7.40998656552027_2.08650332959374-2 chr9 86571974 86572618 + 2.08650332959374 NA promoter-TSS (NM_028352) promoter-TSS (NM_028352) 243 NM_027100 69519 Mm.272517 NM_027100 ENSMUSG00000032417 Rwdd2a 1700030C20Rik|AI848608|Rwdd2 RWD domain containing 2A protein-coding common_peak1_33_145_0.44032401328051_7.40998656552027_2.08650332959374 chr14 25637490 25638247 + 2.08650332959374 NA intron (NM_001310666, intron 7 of 23) intron (NM_001310666, intron 7 of 23) 34355 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak2_58_314_0.306318386654546_8.45236721171455_2.08610114238409 chr6 118065805 118067474 + 2.08610114238409 NA intron (NM_027526, intron 1 of 12) intron (NM_027526, intron 1 of 12) 254 NM_027526 70727 Mm.87660 NM_027526 ENSMUSG00000030134 Rasgef1a 6330404M18Rik|AI835194 RasGEF domain family, member 1A protein-coding common_peak1_113_998_-0.193229837055886_9.86772594926448_2.08591348519586 chr11 97825584 97826912 + 2.08591348519586 NA intron (NM_010688, intron 4 of 6) intron (NM_010688, intron 4 of 6) -14532 NM_001080935 68127 Mm.110270 NM_001080935 ENSMUSG00000050538 B230217C12Rik AI840637 RIKEN cDNA B230217C12 gene protein-coding common_peak1_63_350_0.294150665193319_8.60240255290122_2.08588793681317 chr11 34009403 34010503 + 2.08588793681317 NA Intergenic Intergenic -16760 NM_001190886 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding common_peak1_63_350_0.294150665193319_8.60240255290122_2.08588793681317-2 chr9 32488175 32489338 + 2.08588793681317 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 52696 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_23_87_0.554343849454797_6.7366035433647_2.08574641690571-2 chr2 152397718 152398187 + 2.08574641690571 NA promoter-TSS (NM_011438) promoter-TSS (NM_011438) 94 NM_011438 20667 Mm.28424 NM_011438 ENSMUSG00000051817 Sox12 2010205A02Rik SRY (sex determining region Y)-box 12 protein-coding unique_peak2_23_87_0.554343849454797_6.7366035433647_2.08574641690571-2 chr4 99193975 99194560 + 2.08574641690571 NA 5' UTR (NM_001145967, exon 1 of 11) 5' UTR (NM_001145967, exon 1 of 11) 120 NM_001145967 242557 Mm.241663 NM_175029 ENSMUSG00000028550 Atg4c Apg4-C|Apg4c|Atg4cl|Autl1 autophagy related 4C, cysteine peptidase protein-coding common_peak1_23_87_0.554343849454797_6.7366035433647_2.08574641690571 chr11 74557017 74557465 + 2.08574641690571 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 32917 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_23_87_0.554343849454797_6.7366035433647_2.08574641690571-3 chr3 107759790 107760304 + 2.08574641690571 NA exon (NM_001113530, exon 1 of 9) exon (NM_001113530, exon 1 of 9) 422 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding unique_peak2_23_87_0.554343849454797_6.7366035433647_2.08574641690571-3 chr9 48826063 48826910 + 2.08574641690571 NA intron (NM_001033324, intron 2 of 6) X7C_LINE|LINE|CR1 9459 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding unique_peak2_23_87_0.554343849454797_6.7366035433647_2.08574641690571 chr15 82379541 82380275 + 2.08574641690571 NA intron (NM_019823, intron 1 of 9) intron (NM_019823, intron 1 of 9) 352 NM_019823 56448 Mm.474216 NM_019823 ENSMUSG00000061740 Cyp2d22 2D22 cytochrome P450, family 2, subfamily d, polypeptide 22 protein-coding common_peak2_95_820_-0.214238321312997_9.57411925112131_2.08528349101324 chr8 40594169 40596498 + 2.08528349101324 NA intron (NM_001040699, intron 4 of 13) intron (NM_001040699, intron 4 of 13) 39459 NM_001040699 54384 Mm.294871 NM_019433 ENSMUSG00000039431 Mtmr7 - myotubularin related protein 7 protein-coding common_peak1_15_47_0.711290762404012_5.94060788192316_2.08526029943626 chr19 57610527 57610884 + 2.08526029943626 NA promoter-TSS (NM_181415) promoter-TSS (NM_181415) -329 NM_181415 226255 Mm.245340 NM_181415 ENSMUSG00000054843 Atrnl1 AI504415|AW555641|Alp|Atrnl|Atrnlp attractin like 1 protein-coding common_peak1_15_47_0.711290762404012_5.94060788192316_2.08526029943626-2 chr2 25184752 25185183 + 2.08526029943626 NA Intergenic Intergenic 4209 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding unique_peak1_15_47_0.711290762404012_5.94060788192316_2.08526029943626 chr18 34840545 34840970 + 2.08526029943626 NA exon (NM_144865, exon 1 of 8) exon (NM_144865, exon 1 of 8) 168 NM_144865 225362 Mm.293588 NM_144865 ENSMUSG00000038555 Reep2 - receptor accessory protein 2 protein-coding common_peak1_59_483_-0.283594493490535_8.77706599052933_2.08460770292481 chr11 58095863 58097160 + 2.08460770292481 NA Intergenic Intergenic -7642 NM_026949 69125 Mm.28910 NM_026949 ENSMUSG00000020515 Cnot8 1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059 CCR4-NOT transcription complex, subunit 8 protein-coding common_peak1_51_264_0.332185006376726_8.21594105263893_2.08441598635308-2 chr3 121814486 121815481 + 2.08441598635308 NA intron (NM_008991, intron 1 of 22) CpG 232 NM_008991 19299 Mm.399042 NM_008991 ENSMUSG00000028127 Abcd3 AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1 ATP-binding cassette, sub-family D (ALD), member 3 protein-coding common_peak1_51_264_0.332185006376726_8.21594105263893_2.08441598635308 chr17 8127545 8128420 + 2.08441598635308 NA TTS (NM_026611).2 TTS (NM_026611).2 19806 NM_001083938 100037283 Mm.426736 NM_001083938 ENSMUSG00000095687 Rnaset2a 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2A protein-coding common_peak1_42_334_-0.342290115091185_8.21687222779954_2.08441598635298 chr9 123923072 123923664 + 2.08441598635298 NA Intergenic Intergenic 45324 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding unique_peak2_29_227_-0.424233581567038_7.62077322338122_2.08429330645324 chr10 59380054 59381846 + 2.08429330645324 NA Intergenic Intergenic -22735 NM_023530 69836 Mm.30268 NM_023530 ENSMUSG00000009646 Pla2g12b 2010002E04Rik|Fksg71|Pla2g13|hlb218 phospholipase A2, group XIIB protein-coding common_peak1_37_170_0.409123999697348_7.62241451473457_2.08429330645324 chr19 45560011 45560539 + 2.08429330645324 NA promoter-TSS (NM_172639) promoter-TSS (NM_172639) 268 NM_020032 56626 Mm.46509 NM_020032 ENSMUSG00000025218 Poll 1110003P06Rik|AV007317 polymerase (DNA directed), lambda protein-coding unique_peak2_37_170_0.409123999697348_7.62241451473457_2.08429330645324 chr8 126805533 126806823 + 2.08429330645324 NA Intergenic Intergenic 139743 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak1_191_1825_-0.140858648333058_10.7640417258177_2.08338593098843 chr16 49768158 49770931 + 2.08338593098843 NA Intergenic B1_Mus2|SINE|Alu 70250 NM_028680 73916 Mm.241276 NM_028680 ENSMUSG00000032965 Ift57 4833420A15Rik|Esrrbl1|Hippi|MHS4R2 intraflagellar transport 57 protein-coding unique_peak2_57_306_0.313180780328747_8.41868523553455_2.08253089268239 chr17 50630750 50632834 + 2.08253089268239 NA intron (NM_013880, intron 3 of 5) intron (NM_013880, intron 3 of 5) -66889 NM_001297747 12228 Mm.392910 NM_009770 ENSMUSG00000022863 Btg3 ANA|tob5 B cell translocation gene 3 protein-coding common_peak2_57_306_0.313180780328747_8.41868523553455_2.08253089268239 chr11 75012482 75014020 + 2.08253089268239 NA intron (NM_001002764, intron 10 of 18) intron (NM_001002764, intron 10 of 18) 52740 NR_030454 735274 NR_030454 ENSMUSG00000106252 Mir684-1 Mirn684-1 microRNA 684-1 ncRNA common_peak2_57_306_0.313180780328747_8.41868523553455_2.08253089268239-2 chr3 19305450 19307656 + 2.08253089268239 NA intron (NM_001122759, intron 1 of 12) intron (NM_001122759, intron 1 of 12) 4769 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding unique_peak2_36_164_0.413461436965594_7.57305293272861_2.08073903420877-2 chr18 75352929 75354185 + 2.08073903420877 NA Intergenic Intergenic -13808 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding unique_peak2_36_164_0.413461436965594_7.57305293272861_2.08073903420877 chr16 55787872 55789184 + 2.08073903420877 NA Intergenic B4|SINE|B4 33610 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak1_36_164_0.413461436965594_7.57305293272861_2.08073903420877 chr13 33048125 33048784 + 2.08073903420877 NA Intergenic RMER17B|LTR|ERVK 21040 NM_011452 20706 Mm.45371 NM_011452 ENSMUSG00000021403 Serpinb9b 1600019A21Rik|R86|SPI-CI|Spi10|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9b protein-coding common_peak2_72_419_0.268073508719505_8.84828227202588_2.08051034505755 chr5 114813210 114814229 + 2.08051034505755 NA intron (NR_027818, intron 1 of 1) CpG 257 NR_027818 66236 Mm.268546 NR_027817 ENSMUSG00000072694 1500011B03Rik AI415201|AV141149|AW556386 RIKEN cDNA 1500011B03 gene ncRNA common_peak1_72_419_0.268073508719505_8.84828227202588_2.08051034505755 chr4 108070354 108071772 + 2.08051034505755 NA intron (NM_011327, intron 12 of 15) intron (NM_011327, intron 12 of 15) -16294 NR_105823 102465213 NR_105823 ENSMUSG00000098980 Mir6397 Gm28004|mmu-mir-6397 microRNA 6397 ncRNA common_peak2_80_482_0.250462704157105_9.04111073091433_2.08015695620553 chr10 85956833 85958302 + 2.08015695620553 NA intron (NM_145422, intron 1 of 11) CpG 226 NM_145422 28088 Mm.9257 NM_145422 ENSMUSG00000001783 Rtcb AI255213|AI463255|D10Wsu52e|FAAP|HSPC117 RNA 2',3'-cyclic phosphate and 5'-OH ligase protein-coding common_peak2_76_450_0.259737917517686_8.94685258201422_2.0801445547389 chr19 29361207 29362577 + 2.0801445547389 NA promoter-TSS (NM_026362) promoter-TSS (NM_026362) -21 NM_026362 67759 Mm.275511 NM_026362 ENSMUSG00000016495 Plgrkt 1110007H22Rik|5033414D02Rik|AI852040|Plg-R(KT)|Plg-RKT plasminogen receptor, C-terminal lysine transmembrane protein protein-coding common_peak1_30_235_-0.415960844627535_7.67466262704807_2.07995098347043 chr9 79795254 79795947 + 2.07995098347043 NA intron (NR_040734, intron 1 of 2) B1_Mus2|SINE|Alu 1959 NR_040734 74633 Mm.262175 NR_040734 ENSMUSG00000086918 4930429F24Rik - RIKEN cDNA 4930429F24 gene ncRNA common_peak2_30_235_-0.415960844627535_7.67466262704807_2.07995098347043 chr5 99267173 99268709 + 2.07995098347043 NA Intergenic Intergenic -15014 NM_145839 320292 Mm.259074 NM_145839 ENSMUSG00000089809 Rasgef1b 4732452O09Rik|GPIgamma4|Gpig4 RasGEF domain family, member 1B protein-coding common_peak1_318_3316_-0.103618569147599_11.6438540122142_2.07985981144717 chr11 60536798 60539500 + 2.07985981144717 NA 5' UTR (NM_172943, exon 1 of 4) 5' UTR (NM_172943, exon 1 of 4) 466 NM_172943 268420 Mm.262056 NM_172943 ENSMUSG00000042650 Alkbh5 AW050020|AW215868|Abh5|E130207K11|Ofoxd alkB homolog 5, RNA demethylase protein-coding common_peak1_239_2371_-0.123394928389231_11.1501908303514_2.07965077816227 chrX 73965446 73968361 + 2.07965077816227 NA promoter-TSS (NM_008224) promoter-TSS (NM_008224) -546 NM_008224 15161 Mm.491126 NM_008224 ENSMUSG00000031386 Hcfc1 AW060991|HCF|HCF1 host cell factor C1 protein-coding unique_peak2_40_317_-0.351439690218929_8.13716311017489_2.07933103878115 chr3 154182273 154184016 + 2.07933103878115 NA intron (NM_001081263, intron 2 of 21) intron (NM_001081263, intron 2 of 21) 147416 NM_010713 16875 Mm.15530 NM_010713 ENSMUSG00000096225 Lhx8 L3|Lhx7 LIM homeobox protein 8 protein-coding common_peak1_40_317_-0.351439690218929_8.13716311017489_2.07933103878115 chrX 7878210 7878804 + 2.07933103878115 NA exon (NM_138606, exon 1 of 6) exon (NM_138606, exon 1 of 6) 201 NM_138606 18715 Mm.347478 NM_138606 ENSMUSG00000031155 Pim2 DXCch3|Pim-2 proviral integration site 2 protein-coding common_peak1_18_141_-0.549382916107792_6.87505566145079_2.07760629247593-2 chr4 117681985 117682316 + 2.07760629247593 NA promoter-TSS (NM_023178) promoter-TSS (NM_023178) 75 NM_023178 66233 Mm.29142 NM_023178 ENSMUSG00000009640 Dmap1 1500016M21Rik|DNMAP1|DNMTAP1|Dmtap1|mKIAA1425 DNA methyltransferase 1-associated protein 1 protein-coding common_peak1_18_141_-0.549382916107792_6.87505566145079_2.07760629247593 chr11 102432048 102432610 + 2.07760629247593 NA intron (NM_008175, intron 1 of 12) intron (NM_008175, intron 1 of 12) 2007 NM_008175 14824 Mm.1568 NM_008175 ENSMUSG00000034708 Grn Pgrn|epithelin granulin protein-coding unique_peak2_18_141_-0.549382916107792_6.87505566145079_2.07760629247593-2 chr5 135632561 135633174 + 2.07760629247593 NA exon (NM_146002, exon 1 of 4) exon (NM_146002, exon 1 of 4) 213 NM_146002 215160 Mm.295438 NM_031398 ENSMUSG00000039917 Rhbdd2 0610011L13Rik|AI480532|Rhbdl7|Usmg1 rhomboid domain containing 2 protein-coding common_peak1_18_141_-0.549382916107792_6.87505566145079_2.07760629247593-3 chr4 147848574 147849054 + 2.07760629247593 NA promoter-TSS (NM_198619) promoter-TSS (NM_198619) -439 NM_198619 242747 Mm.332053 NM_198619 ENSMUSG00000059423 Zfp933 2810408P10Rik zinc finger protein 933 protein-coding common_peak2_18_141_-0.549382916107792_6.87505566145079_2.07760629247593 chr15 80150781 80151676 + 2.07760629247593 NA intron (NM_025609, intron 5 of 10) RLTR18B|LTR|ERVK 18074 NM_025609 66513 Mm.288245 NM_025609 ENSMUSG00000022414 Tab1 2310012M03Rik|Map3k7ip1|b2b449Clo TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding unique_peak2_18_141_-0.549382916107792_6.87505566145079_2.07760629247593 chr17 71828438 71829593 + 2.07760629247593 NA intron (NR_073185, intron 11 of 16) intron (NR_073185, intron 11 of 16) 47068 NM_030179 78785 Mm.196382 NM_030179 ENSMUSG00000024059 Clip4 1700024K14Rik|1700074B05Rik|4833417L20Rik|5830409B12Rik|Rsnl2 CAP-GLY domain containing linker protein family, member 4 protein-coding common_peak1_63_518_-0.270112842860001_8.88453430692788_2.07741353588414 chr17 56913104 56914251 + 2.07741353588414 NA intron (NM_022328, intron 3 of 11) intron (NM_022328, intron 3 of 11) 21711 NM_022328 64144 Mm.148748 NM_022328 ENSMUSG00000024212 Mllt1 AA407901|BAM11|ENL|LTG19 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1 protein-coding common_peak1_58_474_-0.286257298176485_8.74865505413007_2.07720344143131 chr4 133055651 133056793 + 2.07720344143131 NA intron (NM_146155, intron 3 of 6) intron (NM_146155, intron 3 of 6) 44716 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak1_31_243_-0.407871763251363_7.72680145593721_2.07693942664332-2 chr12 25438411 25438959 + 2.07693942664332 NA Intergenic Intergenic 309511 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_31_243_-0.407871763251363_7.72680145593721_2.07693942664332-3 chr19 26604362 26604988 + 2.07693942664332 NA promoter-TSS (NM_011416) promoter-TSS (NM_011416) -485 NM_011416 67155 Mm.342988 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding common_peak1_31_243_-0.407871763251363_7.72680145593721_2.07693942664332 chr11 49979313 49980007 + 2.07693942664332 NA 3' UTR (NM_029004, exon 14 of 14) 3' UTR (NM_029004, exon 14 of 14) -45671 NM_021540 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak1_84_714_-0.230157583813261_9.36672063975912_2.07677454225816 chr7 141268347 141269723 + 2.07677454225816 NA TTS (NM_028069) TTS (NM_028069) -2611 NM_001252600 54123 Mm.3233 NM_016850 ENSMUSG00000025498 Irf7 - interferon regulatory factor 7 protein-coding common_peak2_22_172_-0.496167423543215_7.18654451586512_2.07660557812461 chr4 124936988 124937733 + 2.07660557812461 NA promoter-TSS (NM_026560) promoter-TSS (NM_026560) 312 NM_177573 194268 Mm.266907 NM_177573 9930104L06Rik - RIKEN cDNA 9930104L06 gene protein-coding common_peak1_22_172_-0.496167423543215_7.18654451586512_2.07660557812461 chr1 191419207 191419664 + 2.07660557812461 NA Intergenic Intergenic -22394 NM_144880 226849 Mm.205569 NM_144880 ENSMUSG00000026626 Ppp2r5a PR61alpha protein phosphatase 2, regulatory subunit B', alpha protein-coding common_peak2_35_275_-0.377226783719145_7.9199110649186_2.07572709271352 chr5 111880643 111882406 + 2.07572709271352 NA Intergenic Charlie8|DNA|hAT-Charlie -119796 NR_045833 269683 Mm.136946 NM_207252 ENSMUSG00000085271 E130006D01Rik Gm16018|Gm681|OTTMUSG00000029083 RIKEN cDNA E130006D01 gene ncRNA common_peak2_62_343_0.295344405249685_8.57393695732694_2.07571626658872-2 chr9 35569430 35570745 + 2.07571626658872 NA promoter-TSS (NM_029762) promoter-TSS (NM_029762) -18 NM_029762 76832 Mm.482285 NM_029762 ENSMUSG00000050555 Hyls1 3010015K02Rik hydrolethalus syndrome 1 protein-coding common_peak2_62_343_0.295344405249685_8.57393695732694_2.07571626658872 chr16 15862265 15863973 + 2.07571626658872 NA 5' UTR (NM_029354, exon 1 of 3) 5' UTR (NM_029354, exon 1 of 3) 203 NM_029354 72083 Mm.22351 NM_029354 ENSMUSG00000022671 Mzt2 2410018G20Rik|2610001E06Rik|Fam128|Fam128b mitotic spindle organizing protein 2 protein-coding common_peak1_125_865_0.189998256411414_9.85322234293243_2.07525417274475 chr7 80864421 80865962 + 2.07525417274475 NA intron (NM_009553, intron 2 of 2) intron (NM_009553, intron 2 of 2) 3083 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak2_51_412_-0.307964415592158_8.53601576362337_2.07521438709721 chr7 106257471 106258902 + 2.07521438709721 NA Intergenic Intergenic -42846 NM_029000 74558 Mm.458429 NM_029000 ENSMUSG00000045868 Gvin1 9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1 GTPase, very large interferon inducible 1 protein-coding common_peak1_32_251_-0.399959975839037_7.7772999355804_2.07512226290169 chr17 33394684 33395224 + 2.07512226290169 NA promoter-TSS (NM_009542) promoter-TSS (NM_009542) -317 NM_009542 22643 Mm.4417 NM_009542 ENSMUSG00000055240 Zfp101 AI316498|AI325003 zinc finger protein 101 protein-coding unique_peak2_9_75_-0.783405596999166_5.856224714944_2.07502359373632-2 chr2 84478884 84479315 + 2.07502359373632 NA Intergenic RLTR18-int|LTR|ERVK -2324 NM_001177320 21788 Mm.124316 NM_011576 ENSMUSG00000027082 Tfpi A630013F22Rik|AW552122|EPI|LACI tissue factor pathway inhibitor protein-coding unique_peak2_9_75_-0.783405596999166_5.856224714944_2.07502359373632-3 chr5 105589211 105589950 + 2.07502359373632 NA intron (NM_133897, intron 3 of 3) RLTR11B|LTR|ERVK 70109 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding unique_peak2_9_75_-0.783405596999166_5.856224714944_2.07502359373632 chr12 116416441 116417155 + 2.07502359373632 NA intron (NM_133762, intron 7 of 28) intron (NM_133762, intron 7 of 28) 11396 NM_133762 76044 Mm.491196 NM_133762 ENSMUSG00000042029 Ncapg2 5830426I05Rik|Luzp5|Mtb|mCAP-G2 non-SMC condensin II complex, subunit G2 protein-coding common_peak2_106_927_-0.199010575771799_9.75847570724167_2.07476924532709 chr3 129724452 129725929 + 2.07476924532709 NA promoter-TSS (NM_001310737) promoter-TSS (NM_001310737) -104 NM_001310737 13645 Mm.252481 NM_010113 ENSMUSG00000028017 Egf AI790464 epidermal growth factor protein-coding common_peak2_34_267_-0.384643475934238_7.87376745249065_2.07461289454503 chr10 12887844 12889275 + 2.07461289454503 NA Intergenic Intergenic -26824 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak2_287_2938_-0.109975037033241_11.4661221251347_2.07457630905005 chr3 89960002 89964459 + 2.07457630905005 NA intron (NM_001081182, intron 1 of 27) intron (NM_001081182, intron 1 of 27) 1102 NM_001081182 54667 Mm.30455 NM_001081182 ENSMUSG00000060671 Atp8b2 Id ATPase, class I, type 8B, member 2 protein-coding common_peak2_33_259_-0.392219240867927_7.82625819259449_2.07438115100902 chr12 98215032 98216330 + 2.07438115100902 NA intron (NM_008079, intron 12 of 16) intron (NM_008079, intron 12 of 16) 43778 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding common_peak2_33_259_-0.392219240867927_7.82625819259449_2.07438115100902-2 chr8 110859222 110860571 + 2.07438115100902 NA exon (NM_133973, exon 8 of 19) exon (NM_133973, exon 8 of 19) 12872 NM_133973 102339 Mm.272930 NM_133973 ENSMUSG00000031753 Cog4 AW554810|D8Ertd515e component of oligomeric golgi complex 4 protein-coding common_peak1_19_66_0.625045037173004_6.37861170904427_2.07438007356203-3 chr16 32647863 32648319 + 2.07438007356203 NA intron (NM_016788, intron 1 of 15) B1_Mus1|SINE|Alu 3448 NM_016788 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding common_peak1_19_66_0.625045037173004_6.37861170904427_2.07438007356203 chr1 36570717 36571043 + 2.07438007356203 NA intron (NM_027957, intron 3 of 5) intron (NM_027957, intron 3 of 5) -12499 NM_001126047 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding common_peak1_19_66_0.625045037173004_6.37861170904427_2.07438007356203-7 chr7 58740925 58741381 + 2.07438007356203 NA intron (NM_009728, intron 2 of 20) intron (NM_009728, intron 2 of 20) 82951 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_19_66_0.625045037173004_6.37861170904427_2.07438007356203-2 chr11 116616487 116616889 + 2.07438007356203 NA intron (NM_172572, intron 1 of 18) intron (NM_172572, intron 1 of 18) 7564 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak1_19_66_0.625045037173004_6.37861170904427_2.07438007356203-6 chr6 108709139 108709589 + 2.07438007356203 NA Intergenic Intergenic -48430 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_19_66_0.625045037173004_6.37861170904427_2.07438007356203-5 chr2 29820349 29820805 + 2.07438007356203 NA Intergenic Intergenic -6812 NM_026615 68205 Mm.20273 NM_026615 ENSMUSG00000069020 Urm1 2900073H19Rik ubiquitin related modifier 1 protein-coding common_peak1_19_66_0.625045037173004_6.37861170904427_2.07438007356203-4 chr19 8995376 8995738 + 2.07438007356203 NA intron (NM_009643, intron 1 of 4) intron (NM_009643, intron 1 of 4) 6273 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_57_464_-0.285811280296469_8.71818126584716_2.07421597911367 chr11 74559836 74560989 + 2.07421597911367 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 29746 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_67_381_0.279332055311135_8.71709485569131_2.07421597911367 chr7 16174654 16176242 + 2.07421597911367 NA promoter-TSS (NM_001277989) promoter-TSS (NM_001277989) 53 NR_102730 17537 Mm.360516 NM_008627 ENSMUSG00000041420 Meis3 AI573393|Mrg2 Meis homeobox 3 protein-coding common_peak1_90_563_0.232793690321254_9.25594819755942_2.07418386975909 chr15 79228871 79229852 + 2.07418386975909 NA promoter-TSS (NM_001045558) promoter-TSS (NM_001045558) -21 NM_001045558 18693 Mm.259464 NM_008837 ENSMUSG00000068206 Pick1 Prkcabp protein interacting with C kinase 1 protein-coding common_peak2_56_299_0.315680029054292_8.38665870502303_2.07411516333395 chr3 121814412 121815738 + 2.07411516333395 NA exon (NM_008991, exon 1 of 23) exon (NM_008991, exon 1 of 23) 140 NM_008991 19299 Mm.399042 NM_008991 ENSMUSG00000028127 Abcd3 AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1 ATP-binding cassette, sub-family D (ALD), member 3 protein-coding common_peak2_168_1268_0.158337494688304_10.3886451011853_2.0740577448389 chr8 85298593 85300606 + 2.0740577448389 NA promoter-TSS (NR_028268) promoter-TSS (NR_028268) -33 NM_001163791 56452 Mm.29709 NM_019716 ENSMUSG00000031697 Orc6 6720420I10Rik|Orc6l origin recognition complex, subunit 6 protein-coding common_peak2_240_2004_0.126464973912366_11.0326190082985_2.07405108797791 chr16 35982580 35984999 + 2.07405108797791 NA intron (NM_008465, intron 1 of 13) CpG 426 NM_008465 16646 Mm.3991 NM_008465 ENSMUSG00000022905 Kpna1 AW494490|IPOA5|NPI1|Rch2|mSRP1 karyopherin (importin) alpha 1 protein-coding common_peak1_80_676_-0.236669940582118_9.28467705328394_2.07363729791956 chr5 20954993 20956192 + 2.07363729791956 NA non-coding (NR_030699, exon 1 of 1) non-coding (NR_030699, exon 1 of 1) -3770 NM_001080977 242860 Mm.254286 NM_001080977 ENSMUSG00000039968 Rsbn1l 8430412F05Rik|AI447441|C330002G24Rik round spermatid basic protein 1-like protein-coding common_peak2_157_1454_-0.158092035495974_10.4277574200477_2.07341014739471 chr2 71832255 71835339 + 2.07341014739471 NA intron (NM_001277970, intron 10 of 24) intron (NM_001277970, intron 10 of 24) -39427 NM_172665 228026 Mm.34411 NM_172665 ENSMUSG00000006494 Pdk1 B830012B01|D530020C15Rik pyruvate dehydrogenase kinase, isoenzyme 1 protein-coding common_peak1_37_292_-0.367780339839002_8.01086668450275_2.07340122769783 chr2 143062817 143063704 + 2.07340122769783 NA intron (NM_021335, intron 1 of 6) CpG 191 NM_021335 20639 Mm.1323 NM_021335 ENSMUSG00000008333 Snrpb2 2810052G09Rik U2 small nuclear ribonucleoprotein B protein-coding common_peak2_402_3857_0.0920496917600371_11.9596622739291_2.07319839726672 chr11 6557480 6563244 + 2.07319839726672 NA intron (NM_001190344, intron 1 of 9) MER47A|DNA|TcMar-Tigger 179 NM_001190344 216527 Mm.221271 NM_146014 ENSMUSG00000000378 Ccm2 BC029157 cerebral cavernous malformation 2 protein-coding common_peak2_71_411_0.271409457062161_8.8222052557143_2.07242959294384 chr12 70077753 70079567 + 2.07242959294384 NA intron (NM_001286080, intron 4 of 29) ID_B1|SINE|B4 24194 NM_001081453 18080 Mm.244047 NM_008697 ENSMUSG00000021068 Nin 3110068G20Rik|AI385615|AU024711|mKIAA1565 ninein protein-coding common_peak1_23_179_-0.47807762823758_7.25281428221088_2.07141315203737-2 chr7 126655423 126655954 + 2.07141315203737 NA intron (NM_029339, intron 1 of 9) intron (NM_029339, intron 1 of 9) 6379 NM_029339 75565 Mm.45686 NM_029339 ENSMUSG00000030714 Sgf29 1700023O11Rik|9530025I05Rik|Ccdc101 SAGA complex associated factor 29 protein-coding common_peak1_23_179_-0.47807762823758_7.25281428221088_2.07141315203737 chr4 40238235 40238833 + 2.07141315203737 NA intron (NM_172689, intron 1 of 17) intron (NM_172689, intron 1 of 17) 1291 NM_172689 230073 Mm.86382 NM_172689 ENSMUSG00000040296 Ddx58 6430573D20Rik|C330021E21|RIG-I|RLR-1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 protein-coding common_peak1_36_284_-0.375034457840695_7.96730088013176_2.07055579600979 chr6 129608512 129609148 + 2.07055579600979 NA Intergenic Intergenic 13853 NM_033078 27007 Mm.8217 NM_033078 ENSMUSG00000030149 Klrk1 D6H12S2489E|NKG2-D|Nkg2d killer cell lectin-like receptor subfamily K, member 1 protein-coding common_peak1_168_1572_-0.151489106886277_10.5435584019725_2.07040703391483 chr16 18811149 18812968 + 2.07040703391483 NA promoter-TSS (NM_009862) promoter-TSS (NM_009862) -86 NM_009862 12544 Mm.1248 NM_009862 ENSMUSG00000000028 Cdc45 Cdc45l cell division cycle 45 protein-coding common_peak2_251_2122_0.122945126419115_11.1133612191149_2.06950454215055 chr2 153344872 153348234 + 2.06950454215055 NA promoter-TSS (NR_040318) promoter-TSS (NR_040318) 414 NM_001039939 228790 Mm.330677 NM_001039939 ENSMUSG00000042548 Asxl1 mKIAA0978 additional sex combs like 1 protein-coding common_peak2_431_4212_0.0880246110227656_12.0846445060736_2.06936951359734 chr13 59768761 59771947 + 2.06936951359734 NA promoter-TSS (NM_026921) promoter-TSS (NM_026921) 388 NR_015349 13996 Mm.490435 NR_015349 ENSMUSG00000089875 Etohd2 AW491659 ethanol decreased 2 ncRNA common_peak2_152_1401_-0.161465340729883_10.3725379636457_2.06929179982382 chr11 90253613 90258373 + 2.06929179982382 NA intron (NM_026178, intron 1 of 6) intron (NM_026178, intron 1 of 6) 6517 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak2_96_613_0.223243517993231_9.37371660436679_2.06874723613614 chr10 13500051 13501613 + 2.06874723613614 NA promoter-TSS (NM_025799) promoter-TSS (NM_025799) -196 NM_025799 66848 Mm.26625 NM_025799 ENSMUSG00000019810 Fuca2 0610025O11Rik|5530401P20Rik fucosidase, alpha-L- 2, plasma protein-coding common_peak1_135_1222_-0.172835493994146_10.1697909415303_2.06870898032796 chr10 128337143 128338585 + 2.06870898032796 NA promoter-TSS (NM_026444) promoter-TSS (NM_026444) 32 NM_026444 12974 Mm.58836 NM_026444 ENSMUSG00000005683 Cs 2610511A05Rik|9030605P22Rik|Ahl4|BB234005|Cis citrate synthase protein-coding common_peak2_99_638_0.2195676935621_9.42945596772805_2.06822559475667 chr2 34753473 34755175 + 2.06822559475667 NA 5' UTR (NM_025709, exon 2 of 27) 5' UTR (NM_025709, exon 2 of 27) 908 NM_025709 66691 Mm.156452 NM_025709 ENSMUSG00000026867 Gapvd1 2010005B09Rik|4432404J10Rik|AW108497|Gapex-5|RAP6|RME-6|mKIAA1521 GTPase activating protein and VPS9 domains 1 protein-coding common_peak2_99_638_0.2195676935621_9.42945596772805_2.06822559475667-2 chr5 5379323 5381266 + 2.06822559475667 NA promoter-TSS (NM_011074) promoter-TSS (NM_011074) -43 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding common_peak1_99_638_0.2195676935621_9.42945596772805_2.06822559475667 chr7 66118196 66119214 + 2.06822559475667 NA intron (NM_001081163, intron 1 of 2) intron (NM_001081163, intron 1 of 2) 9190 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_426_4151_0.0884648319545605_12.0638231443352_2.06809640738079 chr9 75407133 75411393 + 2.06809640738079 NA promoter-TSS (NM_027418) promoter-TSS (NM_027418) 96 NM_027418 50772 Mm.480076 NM_015806 ENSMUSG00000042688 Mapk6 2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6 mitogen-activated protein kinase 6 protein-coding common_peak1_204_1970_-0.135163209099739_10.8771304564936_2.0679704693792 chr12 9029736 9031081 + 2.0679704693792 NA intron (NM_029321, intron 1 of 2) CpG 411 NM_029321 75516 Mm.37581 NM_029321 ENSMUSG00000066637 Ttc32 1700013G20Rik tetratricopeptide repeat domain 32 protein-coding unique_peak2_15_119_-0.610637332483351_6.60157192936684_2.06789008300516-2 chr9 85095103 85096192 + 2.06789008300516 NA Intergenic Intergenic 231477 NM_001160378 212943 Mm.74610 NM_001160378 ENSMUSG00000032265 Fam46a BAP014|D930050G01Rik family with sequence similarity 46, member A protein-coding common_peak1_15_119_-0.610637332483351_6.60157192936684_2.06789008300516 chr6 48700458 48700825 + 2.06789008300516 NA TTS (NM_153175) TTS (NM_153175) 7603 NM_153175 231931 Mm.321047 NM_153175 ENSMUSG00000047867 Gimap6 4833419H03Rik|Ian6|mFLJ00102 GTPase, IMAP family member 6 protein-coding unique_peak2_15_119_-0.610637332483351_6.60157192936684_2.06789008300516 chr13 109546184 109546876 + 2.06789008300516 NA intron (NM_011056, intron 3 of 16) intron (NM_011056, intron 3 of 16) 221786 NR_030644 100124489 NR_030644 ENSMUSG00000076946 Mir582 Mirn582|mir-582|mmu-mir-582 microRNA 582 ncRNA common_peak2_149_1086_0.170625794448716_10.1714491222517_2.0671760579846 chr3 106546891 106548673 + 2.0671760579846 NA promoter-TSS (NM_133869) promoter-TSS (NM_133869) -16 NM_001286986 67171 Mm.290488 NM_026013 ENSMUSG00000027900 Dram2 2010305N14Rik|2610318G18Rik|AI647667|Tmem77 DNA-damage regulated autophagy modulator 2 protein-coding common_peak2_132_929_0.182813406666966_9.95249360932888_2.06665277384892 chr11 88098509 88100263 + 2.06665277384892 NA non-coding (NR_045499, exon 4 of 4) non-coding (NR_045499, exon 4 of 4) 240 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_119_812_0.194769512895389_9.76449629852272_2.06661544272968 chr1 92101718 92104839 + 2.06661544272968 NA intron (NM_207225, intron 2 of 26) MIRc|SINE|MIR 77063 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak2_154_1422_-0.159932154913855_10.3947538690696_2.06615796940524 chr19 32711465 32713287 + 2.06615796940524 NA promoter-TSS (NM_026487) promoter-TSS (NM_026487) -78 NM_026487 67979 Mm.27123 NM_026487 ENSMUSG00000013662 Atad1 4921525H23Rik|AW107648|Thorase ATPase family, AAA domain containing 1 protein-coding common_peak1_154_1422_-0.159932154913855_10.3947538690696_2.06615796940524 chr5 24907913 24909533 + 2.06615796940524 NA promoter-TSS (NM_001170556) promoter-TSS (NM_001170556) -214 NM_001170556 108099 Mm.33649 NM_145401 ENSMUSG00000028944 Prkag2 2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding common_peak1_49_394_-0.313081339741725_8.4691681731936_2.06596699330286 chr11 75348460 75349162 + 2.06596699330286 NA promoter-TSS (NM_001164223) promoter-TSS (NM_001164223) 378 NM_001102611 319822 Mm.340377 NM_177009 ENSMUSG00000018809 Smyd4 G430029E23Rik SET and MYND domain containing 4 protein-coding common_peak2_75_628_-0.243327381109685_9.17525251632444_2.06593964962969 chr14 64949245 64950908 + 2.06593964962969 NA promoter-TSS (NM_001253731) promoter-TSS (NM_001253731) 31 NM_001253731 210925 Mm.71332 NM_153414 ENSMUSG00000021975 Ints9 BC028953|D14Ertd231e integrator complex subunit 9 protein-coding common_peak2_108_947_-0.197001013368622_9.79024274221395_2.06501493023716 chr1 182281264 182283250 + 2.06501493023716 NA intron (NM_007853, intron 1 of 2) CpG 502 NM_007853 13244 Mm.29648 NM_007853 ENSMUSG00000038633 Degs1 AA536663|Degs|Des1|Mdes delta(4)-desaturase, sphingolipid 1 protein-coding common_peak1_124_856_0.190969384902203_9.8386360865636_2.06461092276301 chr15 64211675 64213273 + 2.06461092276301 NA intron (NM_001276462, intron 1 of 27) intron (NM_001276462, intron 1 of 27) 100199 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_86_732_-0.224871557467958_9.40523360939983_2.06441183915718 chr4 135986437 135987920 + 2.06441183915718 NA promoter-TSS (NM_025411) promoter-TSS (NM_025411) 66 NM_025411 66193 Mm.29131 NM_025411 ENSMUSG00000028669 Pithd1 1110049F12Rik|AA408179|Trp26 PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1 protein-coding common_peak2_149_1368_-0.162144711781876_10.337834375367_2.06401989158882 chr18 31608996 31610376 + 2.06401989158882 NA exon (NM_026165, exon 1 of 8) exon (NM_026165, exon 1 of 8) 216 NM_026165 67453 Mm.23896 NM_026165 ENSMUSG00000024259 Slc25a46 1200007B05Rik|AI325987 solute carrier family 25, member 46 protein-coding common_peak1_424_4660_-0.0866763628081326_12.1430856161349_2.06364412198523 chr2 122146528 122149221 + 2.06364412198523 NA intron (NM_009735, intron 1 of 3) intron (NM_009735, intron 1 of 3) 187 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding common_peak1_137_1243_-0.171563138697453_10.1949892007819_2.06326856215105 chr11 69691179 69693315 + 2.06326856215105 NA intron (NM_011614, intron 5 of 6) B1_Mm|SINE|Alu 3851 NM_011614 21944 Mm.8983 NM_011614 ENSMUSG00000097328 Tnfsf12 Apo3l|Dr3l|Dr3lg|Tweak tumor necrosis factor (ligand) superfamily, member 12 protein-coding common_peak2_119_1058_-0.186605819021921_9.95518396448138_2.06309715616853 chr5 121383558 121386608 + 2.06309715616853 NA intron (NM_172275, intron 1 of 11) intron (NM_172275, intron 1 of 11) 532 NM_001163470 231712 Mm.20488 NM_172275 ENSMUSG00000042726 Trafd1 1110008K06Rik|Fln29 TRAF type zinc finger domain containing 1 protein-coding common_peak1_13_38_0.774550219969321_5.67267732884691_2.06309159043266 chr12 3856424 3856822 + 2.06309159043266 NA intron (NM_001271753, intron 3 of 22) intron (NM_001271753, intron 3 of 22) 5621 NR_045884 100038522 Mm.417270 NR_045884 ENSMUSG00000073242 Dnmt3aos ENSMUSG00000073242|Gm10485 DNA methyltransferase 3A, opposite strand ncRNA common_peak1_19_148_-0.528034292831385_6.95515137404647_2.0624228386691 chr14 54296889 54297351 + 2.0624228386691 NA Intergenic RLTR4_MM-int|LTR|ERV1 -14195 NM_010991 18348 Mm.436623 NM_010991 ENSMUSG00000048153 Olfr49 IC6|MOR1181 olfactory receptor 49 protein-coding common_peak1_19_148_-0.528034292831385_6.95515137404647_2.0624228386691-4 chr2 132510855 132511368 + 2.0624228386691 NA intron (NR_028286, intron 1 of 3) Lx7|LINE|L1 20383 NR_028286 70371 Mm.394667 NR_028286 ENSMUSG00000086379 1700026D11Rik - RIKEN cDNA 1700026D11 gene ncRNA common_peak1_19_148_-0.528034292831385_6.95515137404647_2.0624228386691-5 chr9 95960371 95960821 + 2.0624228386691 NA intron (NM_001311130, intron 1 of 41) PB1D10|SINE|Alu 5836 NM_001311130 24127 Mm.291179 NM_011916 ENSMUSG00000032410 Xrn1 Dhm2|exo|mXrn1 5'-3' exoribonuclease 1 protein-coding unique_peak2_19_148_-0.528034292831385_6.95515137404647_2.0624228386691 chr13 4191028 4191831 + 2.0624228386691 NA intron (NM_013778, intron 1 of 8) intron (NM_013778, intron 1 of 8) 242 NM_013778 27384 Mm.27447 NM_013778 ENSMUSG00000021213 Akr1c13 mKIAA4014 aldo-keto reductase family 1, member C13 protein-coding common_peak1_19_148_-0.528034292831385_6.95515137404647_2.0624228386691-2 chr16 52181934 52182352 + 2.0624228386691 NA intron (NM_001033238, intron 13 of 17) intron (NM_001033238, intron 13 of 17) 150594 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_19_148_-0.528034292831385_6.95515137404647_2.0624228386691-3 chr19 12575083 12575547 + 2.0624228386691 NA intron (NM_026640, intron 1 of 3) intron (NM_026640, intron 1 of 3) 1790 NM_026640 107373 Mm.1643 NM_026640 ENSMUSG00000024691 Fam111a 4632417K18Rik|AW413625 family with sequence similarity 111, member A protein-coding common_peak2_124_1108_-0.180922871147006_10.0245822145882_2.06141711498628 chr9 66974394 66975959 + 2.06141711498628 NA exon (NM_030717, exon 1 of 6) exon (NM_030717, exon 1 of 6) 308 NM_030717 80907 Mm.157882 NM_030717 ENSMUSG00000032370 Lactb LACT-1|Lact1|Mrpl56 lactamase, beta protein-coding common_peak1_124_1108_-0.180922871147006_10.0245822145882_2.06141711498628 chr14 69731832 69733497 + 2.06141711498628 NA promoter-TSS (NR_130157) promoter-TSS (NR_130157) -94 NM_134078 105513 Mm.159637 NM_134078 ENSMUSG00000034190 Chmp7 4930596K11Rik|6330407G04Rik|AI450338|AW550775 charged multivesicular body protein 7 protein-coding common_peak1_116_1027_-0.188546583432734_9.91135125747751_2.0611669436658 chrX 74429011 74430432 + 2.0611669436658 NA promoter-TSS (NM_010547) promoter-TSS (NM_010547) 40 NM_010547 16151 Mm.12967 NM_010547 ENSMUSG00000004221 Ikbkg 1110037D23Rik|AI848108|AI851264|AW124339|IKK[g]|NEMO inhibitor of kappaB kinase gamma protein-coding common_peak1_113_759_0.201255422405584_9.67048331953374_2.06107326710378 chr14 54863587 54864778 + 2.06107326710378 NA promoter-TSS (NM_001177705) promoter-TSS (NM_001177705) -24 NM_001177705 239099 Mm.280994 NM_183174 ENSMUSG00000057156 Homez mKIAA1443 homeodomain leucine zipper-encoding gene protein-coding common_peak1_11_89_-0.704689939423935_6.13950812661771_2.06080902314195 chr6 142752250 142752655 + 2.06080902314195 NA Intergenic B4A|SINE|B4 -4234 NM_009908 12764 Mm.3820 NM_009908 ENSMUSG00000030282 Cmas AW208911|CMPNeu5Ac|D6Bwg0250e cytidine monophospho-N-acetylneuraminic acid synthetase protein-coding common_peak1_70_404_0.271381448075029_8.7974688218095_2.06056695226241 chr6 113623979 113624810 + 2.06056695226241 NA intron (NM_009507, intron 1 of 2) CpG 373 NM_009507 22346 Mm.29407 NM_009507 ENSMUSG00000033933 Vhl Vhlh von Hippel-Lindau tumor suppressor protein-coding common_peak1_92_580_0.228422367483061_9.29660553714606_2.05954983839803 chr7 97081682 97082648 + 2.05954983839803 NA intron (NM_001162477, intron 1 of 9) CpG 414 NM_010248 14389 Mm.42033 NM_010248 ENSMUSG00000004508 Gab2 AI463667|D130058I17Rik|p97 growth factor receptor bound protein 2-associated protein 2 protein-coding common_peak1_47_376_-0.318032933990212_8.39940424627356_2.05836107983437 chr13 30911866 30912678 + 2.05836107983437 NA intron (NM_025588, intron 6 of 27) intron (NM_025588, intron 6 of 27) 35489 NM_153072 210554 Mm.450571 NM_153072 ENSMUSG00000076430 Hus1b - HUS1 checkpoint clamp component B protein-coding common_peak1_47_376_-0.318032933990212_8.39940424627356_2.05836107983437-2 chrX 151800703 151801428 + 2.05836107983437 NA Intergenic Intergenic -2217 NM_021523 59026 Mm.27372 NM_021523 ENSMUSG00000025261 Huwe1 5430439H10Rik|AU041296|Arf-bp1|C430014N20Rik|C80292|Gm1718|Ib772|LASU1|Mule|Ureb1 HECT, UBA and WWE domain containing 1 protein-coding common_peak1_312_3241_-0.104225179523327_11.6105557857559_2.05833373460749 chr11 32540187 32542791 + 2.05833373460749 NA intron (NM_009288, intron 1 of 18) MLT1A0|LTR|ERVL-MaLR 8223 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_54_285_0.321419681607527_8.32058117758215_2.05813744621453 chr8 53511633 53512316 + 2.05813744621453 NA intron (NM_001005847, intron 1 of 8) intron (NM_001005847, intron 1 of 8) 272 NM_001005847 11593 Mm.334535 NM_001005847 ENSMUSG00000031521 Aga AW060726 aspartylglucosaminidase protein-coding common_peak1_78_656_-0.237650469209013_9.24092432571782_2.05752562711985 chr12 17544940 17545710 + 2.05752562711985 NA intron (NM_013614, intron 1 of 11) CpG 452 NM_013614 18263 Mm.34102 NM_013614 ENSMUSG00000011179 Odc1 ODC ornithine decarboxylase, structural 1 protein-coding common_peak2_98_630_0.219958268831615_9.41147532939836_2.05664533034039 chr4 56801686 56803100 + 2.05664533034039 NA promoter-TSS (NM_026079) promoter-TSS (NM_026079) -62 NM_026079 230233 Mm.282743 NM_026079 ENSMUSG00000028431 Ikbkap 3110040G09Rik|6030413P05|C78473|Elp1|IKAP inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein protein-coding common_peak1_146_1337_-0.164851647577493_10.3034365768527_2.05638732619285 chr1 37429195 37430792 + 2.05638732619285 NA promoter-TSS (NM_026123) promoter-TSS (NM_026123) 110 NM_198006 76178 Mm.28085 NM_198006 ENSMUSG00000026112 Coa5 1700001A24Rik|6330578E17Rik|Pet191 cytochrome C oxidase assembly factor 5 protein-coding common_peak2_301_2675_0.109270295530447_11.4404975484067_2.05612350248397 chr9 82973215 82976704 + 2.05612350248397 NA intron (NM_001081216, intron 2 of 39) intron (NM_001081216, intron 2 of 39) 530 NM_001081216 83946 Mm.221688 NM_031879 ENSMUSG00000032253 Phip 2810004D21Rik|4632404O06Rik|Ndrp|Wdr11 pleckstrin homology domain interacting protein protein-coding common_peak1_244_2427_-0.120570882466676_11.1852672650223_2.05530379054106 chr17 52149369 52151706 + 2.05530379054106 NA Intergenic MTD|LTR|ERVL-MaLR 267810 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA common_peak1_141_1284_-0.167780787047867_10.2436622505573_2.05492104456531 chr16 18247927 18249754 + 2.05492104456531 NA promoter-TSS (NM_001080999) promoter-TSS (NM_001080999) -43 NM_001080999 15547 Mm.271798 NM_008307 ENSMUSG00000022721 Trmt2a Htf9c TRM2 tRNA methyltransferase 2A protein-coding common_peak1_101_877_-0.203794041221546_9.67618010892459_2.05461952967394-2 chr4 43959726 43961352 + 2.05461952967394 NA intron (NM_027450, intron 1 of 4) B4A|SINE|B4 2837 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak1_101_877_-0.203794041221546_9.67618010892459_2.05461952967394 chr15 98952599 98953837 + 2.05461952967394 NA intron (NM_011653, intron 1 of 3) CpG 283 NM_011653 22142 Mm.405359 NM_011653 ENSMUSG00000072235 Tuba1a Tuba-1|Tuba1 tubulin, alpha 1A protein-coding common_peak2_104_907_-0.200968256614095_9.72606435898387_2.05405770729911 chr1 85599861 85601890 + 2.05405770729911 NA 5' UTR (NM_001013817, exon 1 of 17) 5' UTR (NM_001013817, exon 1 of 17) 172 NM_001013817 434484 Mm.445821 NM_001013817 ENSMUSG00000070031 Sp140 - Sp140 nuclear body protein protein-coding common_peak2_104_907_-0.200968256614095_9.72606435898387_2.05405770729911-3 chr4 40278673 40280267 + 2.05405770729911 NA promoter-TSS (NM_001033305) promoter-TSS (NM_001033305) -49 NM_001033305 230075 Mm.1103 NM_001033305 ENSMUSG00000071014 Ndufb6 CI-B17|Gm137 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6 protein-coding common_peak2_104_907_-0.200968256614095_9.72606435898387_2.05405770729911-2 chr2 167146869 167148841 + 2.05405770729911 NA intron (NM_008420, intron 1 of 1) intron (NM_008420, intron 1 of 1) 40963 NM_008420 16500 Mm.205341 NM_008420 ENSMUSG00000050556 Kcnb1 Kcr1-1|Kv2.1|Shab potassium voltage gated channel, Shab-related subfamily, member 1 protein-coding common_peak1_136_1232_-0.17161952786798_10.1821473204689_2.05349853999522 chr18 80206216 80207650 + 2.05349853999522 NA promoter-TSS (NM_001042408) promoter-TSS (NM_001042408) 66 NM_001042408 27366 Mm.172411 NM_025299 ENSMUSG00000057130 Txnl4a D18Wsu98e|Dim1|ENSMUSG00000057130|Txnl4|U5-15kD|U5-15kDa thioredoxin-like 4A protein-coding common_peak1_13_104_-0.654293078834552_6.38709897824885_2.05330344517492 chr19 10816174 10816537 + 2.05330344517492 NA intron (NM_009852, intron 1 of 12) L1_Rod|LINE|L1 13703 NM_001037801 12511 Mm.290897 NM_009852 ENSMUSG00000024670 Cd6 - CD6 antigen protein-coding unique_peak2_13_104_-0.654293078834552_6.38709897824885_2.05330344517492-3 chr11 97025714 97026255 + 2.05330344517492 NA non-coding (NR_133649, exon 1 of 2) non-coding (NR_133649, exon 1 of 2) 434 NR_133649 100127433 Mm.156282 NR_133649 ENSMUSG00000087067 Gm11532 OTTMUSG00000001860|Sp6os predicted gene 11532 ncRNA unique_peak2_13_104_-0.654293078834552_6.38709897824885_2.05330344517492-6 chr8 13653303 13654238 + 2.05330344517492 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 23817 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding unique_peak2_13_104_-0.654293078834552_6.38709897824885_2.05330344517492-5 chr6 128611344 128612304 + 2.05330344517492 NA intron (NM_010737, intron 5 of 5) intron (NM_010737, intron 5 of 5) 11110 NM_001159902 17057 Mm.16729 NM_010737 ENSMUSG00000030361 Klrb1a Ly55a|NKR-P1.7|NKR-P1A|NKRP12|Nkrp1-a|Nkrp1a|ly-55A killer cell lectin-like receptor subfamily B member 1A protein-coding unique_peak2_13_104_-0.654293078834552_6.38709897824885_2.05330344517492-2 chr11 46398740 46399619 + 2.05330344517492 NA intron (NR_105955, intron 2 of 4) intron (NR_105955, intron 2 of 4) -5549 NM_001013783 432552 Mm.443244 NM_001013783 ENSMUSG00000020401 Fam71b Gari-l3|OTTMUSG00000005491 family with sequence similarity 71, member B protein-coding unique_peak2_13_104_-0.654293078834552_6.38709897824885_2.05330344517492-4 chr14 100235269 100235917 + 2.05330344517492 NA Intergenic Intergenic -85797 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding unique_peak2_13_104_-0.654293078834552_6.38709897824885_2.05330344517492 chr10 57754837 57755819 + 2.05330344517492 NA Intergenic Intergenic -29595 NM_021272 12140 Mm.3644 NM_021272 ENSMUSG00000019874 Fabp7 B-FABP|BFABP|Blbp|MRG fatty acid binding protein 7, brain protein-coding common_peak1_65_536_-0.264846019138176_8.93635526841632_2.0531978196688 chrX 164076129 164076627 + 2.0531978196688 NA promoter-TSS (NM_009173) promoter-TSS (NM_009173) 115 NM_001308385 20438 Mm.37215 NM_009173 ENSMUSG00000040749 Siah1b AA960570|Sinh1b|siah-1b seven in absentia 1B protein-coding common_peak2_60_491_-0.277995054292267_8.80351697819311_2.05269696042283 chr14 121894233 121896623 + 2.05269696042283 NA intron (NM_026861, intron 1 of 8) intron (NM_026861, intron 1 of 8) -16020 NR_130999 78312 Mm.188743 NR_130999 ENSMUSG00000102112 1810041H14Rik - RIKEN cDNA 1810041H14 gene ncRNA common_peak1_81_684_-0.231904601596106_9.30400787704984_2.0512044456723 chr11 75209132 75210364 + 2.0512044456723 NA intron (NM_177708, intron 1 of 1) intron (NM_177708, intron 1 of 1) 15755 NM_177708 237847 Mm.82661 NM_177708 ENSMUSG00000045287 Rtn4rl1 Ngr3|Ngrh2|Ngrl2 reticulon 4 receptor-like 1 protein-coding common_peak2_123_1098_-0.182068843842213_10.0109412490281_2.05037525195324 chr1 144247244 144249950 + 2.05037525195324 NA intron (NM_015811, intron 1 of 4) intron (NM_015811, intron 1 of 4) 507 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak2_264_2264_0.118552017387836_11.2045713436275_2.0497853031512 chr7 31086558 31090973 + 2.0497853031512 NA Intergenic Intergenic -12068 NM_008557 17178 Mm.263847 NM_008557 ENSMUSG00000057092 Fxyd3 Mat8 FXYD domain-containing ion transport regulator 3 protein-coding common_peak2_26_104_0.507962049173472_6.96822654225286_2.04834832167125 chr2 49417044 49417905 + 2.04834832167125 NA Intergenic Intergenic -34012 NM_172663 227867 Mm.29167 NM_172663 ENSMUSG00000069495 Epc2 5830499L14|D2Ertd694e enhancer of polycomb homolog 2 (Drosophila) protein-coding common_peak2_77_459_0.254065709849842_8.9725229058693_2.04828902327752 chr7 115615338 115616685 + 2.04828902327752 NA intron (NM_001277327, intron 6 of 14) intron (NM_001277327, intron 6 of 14) 185598 NM_001277328 20679 Mm.323365 NM_011445 ENSMUSG00000051910 Sox6 AI987981|SOX-LZ SRY (sex determining region Y)-box 6 protein-coding common_peak2_309_2766_0.107293174189028_11.4877535157045_2.04802389140109 chr8 113634339 113636710 + 2.04802389140109 NA promoter-TSS (NM_173015) promoter-TSS (NM_173015) -62 NM_001048143 270096 Mm.74689 NM_173015 ENSMUSG00000078908 Mon1b 5031407H10|5033413H12Rik MON1 homolog B, secretory traffciking associated protein-coding common_peak1_25_99_0.511565054866208_6.89963871720783_2.04790800174433 chrX 153723272 153723963 + 2.04790800174433 NA promoter-TSS (NM_027327) promoter-TSS (NM_027327) 63 NM_027327 70123 Mm.146408 NM_027327 ENSMUSG00000086316 2210013O21Rik AI181827|Thp5 RIKEN cDNA 2210013O21 gene protein-coding unique_peak2_25_99_0.511565054866208_6.89963871720783_2.04790800174433 chr1 39761293 39762135 + 2.04790800174433 NA Intergenic Intergenic -40725 NM_001145660 619289 Mm.334107 NM_001145660 ENSMUSG00000057173 Rfx8 4933400N17Rik regulatory factor X 8 protein-coding common_peak2_25_99_0.511565054866208_6.89963871720783_2.04790800174433 chr11 115226495 115227394 + 2.04790800174433 NA intron (NM_001033393, intron 8 of 9) intron (NM_001033393, intron 8 of 9) 39457 NM_001033393 320534 Mm.260587 NM_001033393 ENSMUSG00000045980 Tmem104 C630005D06Rik|mFLJ00021 transmembrane protein 104 protein-coding common_peak1_91_780_-0.217493311675756_9.5004320823041_2.04699832987307 chr13 81710960 81712078 + 2.04699832987307 NA promoter-TSS (NM_001081176) promoter-TSS (NM_001081176) 102 NM_028372 72852 Mm.31095 NM_028372 ENSMUSG00000051098 Mblac2 2900024O10Rik metallo-beta-lactamase domain containing 2 protein-coding common_peak1_91_780_-0.217493311675756_9.5004320823041_2.04699832987307-2 chr17 87285958 87287431 + 2.04699832987307 NA intron (NM_028639, intron 1 of 19) intron (NM_028639, intron 1 of 19) 3808 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak1_44_216_0.364627405120152_7.94386493500456_2.04688733915294 chr11 83632392 83633225 + 2.04688733915294 NA Intergenic Intergenic 16570 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak1_77_647_-0.240294242090407_9.21970288183942_2.04670064127435 chr7 123218523 123219500 + 2.04670064127435 NA intron (NM_146198, intron 1 of 16) intron (NM_146198, intron 1 of 16) 4145 NM_146198 233836 Mm.211838 NM_146198 ENSMUSG00000030769 Slc5a11 2010013B02Rik|Kst1|RKST2|SMIT2|Slc5a10 solute carrier family 5 (sodium/glucose cotransporter), member 11 protein-coding common_peak2_183_1735_-0.1432534947919_10.6899244850485_2.04633491971974 chr12 110756255 110760655 + 2.04633491971974 NA intron (NM_027149, intron 1 of 2) PB1D9|SINE|Alu 20506 NM_027149 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding common_peak2_59_322_0.299878389090136_8.48532954923899_2.04628281460239 chr14 76413761 76415683 + 2.04628281460239 NA promoter-TSS (NM_001310646) promoter-TSS (NM_001310646) -239 NM_001310646 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak1_26_202_-0.443128350345582_7.44377174201239_2.04549121586403-3 chr11 106920902 106921314 + 2.04549121586403 NA promoter-TSS (NM_025481) promoter-TSS (NM_025481) -393 NM_025481 66313 Mm.340955 NM_025481 ENSMUSG00000018363 Smurf2 2810411E22Rik|AI558114|AI649275 SMAD specific E3 ubiquitin protein ligase 2 protein-coding unique_peak2_26_202_-0.443128350345582_7.44377174201239_2.04549121586403 chr9 53609737 53610521 + 2.04549121586403 NA intron (NM_144784, intron 1 of 11) CpG 221 NM_144784 110446 Mm.293233 NM_144784 ENSMUSG00000032047 Acat1 6330585C21Rik|Acat acetyl-Coenzyme A acetyltransferase 1 protein-coding common_peak1_26_202_-0.443128350345582_7.44377174201239_2.04549121586403 chr10 81036873 81037365 + 2.04549121586403 NA Intergenic L2b|LINE|L2 -3207 NM_134135 106947 Mm.5353 NM_134135 ENSMUSG00000046822 Slc39a3 AI845814|Zip3 solute carrier family 39 (zinc transporter), member 3 protein-coding common_peak1_26_202_-0.443128350345582_7.44377174201239_2.04549121586403-2 chr11 98492610 98493141 + 2.04549121586403 NA intron (NM_011771, intron 3 of 7) B3|SINE|B2 46041 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak2_26_202_-0.443128350345582_7.44377174201239_2.04549121586403 chr4 134000235 134001081 + 2.04549121586403 NA intron (NM_026144, intron 1 of 8) intron (NM_026144, intron 1 of 8) 206 NM_026144 67422 Mm.100290 NM_026144 ENSMUSG00000012117 Dhdds 3222401G21Rik|CIT|DS|HDS|W91638 dehydrodolichyl diphosphate synthase protein-coding common_peak1_25_195_-0.459288599474276_7.38506554437807_2.04512640943714-2 chr8 72208175 72208765 + 2.04512640943714 NA intron (NM_001080812, intron 2 of 4) RMER15|LTR|ERVL 4367 NM_001080812 234421 Mm.211247 NM_001080812 ENSMUSG00000074240 Cib3 C730014M21Rik|Gm1107|KIP3 calcium and integrin binding family member 3 protein-coding common_peak1_25_195_-0.459288599474276_7.38506554437807_2.04512640943714 chr2 85048143 85048595 + 2.04512640943714 NA Intergenic CpG -2091 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding common_peak2_44_350_-0.329148582739929_8.2907529289346_2.04502951916395 chr11 87689548 87691007 + 2.04502951916395 NA intron (NM_172448, intron 2 of 9) intron (NM_172448, intron 2 of 9) -9247 NR_045139 68690 Mm.342009 NR_045139 1110028F11Rik - RIKEN cDNA 1110028F11 gene ncRNA common_peak1_94_809_-0.213308307496776_9.5551239440236_2.04494025460395 chr1 85600663 85601745 + 2.04494025460395 NA intron (NM_001013817, intron 1 of 16) intron (NM_001013817, intron 1 of 16) 501 NM_001013817 434484 Mm.445821 NM_001013817 ENSMUSG00000070031 Sp140 - Sp140 nuclear body protein protein-coding common_peak1_130_911_0.184197247682132_9.92498863800581_2.04487197028111 chr2 170130343 170131818 + 2.04487197028111 NA 5' UTR (NM_001033299, exon 1 of 6) 5' UTR (NM_001033299, exon 1 of 6) 140 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_59_482_-0.280610635051714_8.77557406130992_2.04480980427234 chr6 121238457 121239323 + 2.04480980427234 NA Intergenic B1_Mus2|SINE|Alu -7016 NM_011909 24110 Mm.326911 NM_011909 ENSMUSG00000030107 Usp18 1110058H21Rik|AW047653|UBP43|Ubp15 ubiquitin specific peptidase 18 protein-coding common_peak2_147_1068_0.170962135863634_10.1475272056523_2.04468590100923 chr11 120632014 120633938 + 2.04468590100923 NA intron (NM_010756, intron 1 of 2) CpG 571 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding common_peak1_16_52_0.675615806410973_6.06572835776869_2.04420425592611 chr1 155051757 155052252 + 2.04420425592611 NA Intergenic Intergenic 47632 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_16_52_0.675615806410973_6.06572835776869_2.04420425592611-2 chr13 107830734 107831105 + 2.04420425592611 NA intron (NM_145456, intron 2 of 14) intron (NM_145456, intron 2 of 14) 59145 NM_145456 67263 Mm.490418 NM_145456 ENSMUSG00000032846 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak1_16_52_0.675615806410973_6.06572835776869_2.04420425592611-3 chr3 90082730 90083113 + 2.04420425592611 NA intron (NM_001271764, intron 1 of 8) intron (NM_001271764, intron 1 of 8) 3400 NM_001293749 59069 Mm.240839 NM_022314 ENSMUSG00000027940 Tpm3 TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm tropomyosin 3, gamma protein-coding common_peak2_174_1636_-0.147287305072298_10.603194953938_2.04258171001147 chr19 45997420 45999100 + 2.04258171001147 NA intron (NM_198296, intron 1 of 25) CpG 228 NM_198296 71617 Mm.210949 NM_198296 ENSMUSG00000039901 9130011E15Rik AI431055|AW050122 RIKEN cDNA 9130011E15 gene protein-coding common_peak1_52_419_-0.298503752223011_8.56499364155462_2.04241542620753 chr6 136470959 136471923 + 2.04241542620753 NA Intergenic B1_Mur4|SINE|Alu -47410 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_16_126_-0.585148425797994_6.69611047387317_2.04205838347864 chr5 105141758 105142199 + 2.04205838347864 NA Intergenic RMER17C|LTR|ERVK -2392 NM_001256005 17472 Mm.440525 NM_008620 ENSMUSG00000079363 Gbp4 AW228052|Mag-2|Mpa-2|Mpa2 guanylate binding protein 4 protein-coding common_peak1_231_2276_-0.124418328064987_11.0907094121041_2.0411780638977 chr10 67184976 67188016 + 2.0411780638977 NA intron (NM_001242396, intron 1 of 24) intron (NM_001242396, intron 1 of 24) 746 NM_001242396 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding common_peak1_165_1240_0.158830780224347_10.3567027902425_2.0411615517481 chr1 139421301 139423049 + 2.0411615517481 NA promoter-TSS (NM_172643) promoter-TSS (NM_172643) -208 NM_172643 226470 Mm.119711 NM_172643 ENSMUSG00000033964 Zbtb41 8430415N23Rik|9430031N01|9830132G07Rik|AI316857 zinc finger and BTB domain containing 41 protein-coding common_peak1_142_1022_0.173599916837098_10.0853903881639_2.04087257181635 chr8 109564829 109565854 + 2.04087257181635 NA promoter-TSS (NM_175646) promoter-TSS (NM_175646) 260 NM_178380 64340 Mm.23705 NM_178380 ENSMUSG00000037993 Dhx38 5730550P09Rik|AI325984|AW540902|Ddx38|Prp16|mKIAA0224 DEAH (Asp-Glu-Ala-His) box polypeptide 38 protein-coding common_peak1_68_563_-0.256956032151999_9.0110733363228_2.04066312879243 chr15 60130216 60131471 + 2.04066312879243 NA Intergenic Lx8|LINE|L1 -114225 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_142_1294_-0.166546035991489_10.2554633645782_2.04057615034237 chr5 24265593 24267661 + 2.04057615034237 NA Intergenic Intergenic 9099 NR_030454 735274 NR_030454 ENSMUSG00000106252 Mir684-1 Mirn684-1 microRNA 684-1 ncRNA common_peak2_229_2253_-0.125093098014037_11.0757252511652_2.04055516603685 chr10 128096218 128099112 + 2.04055516603685 NA intron (NM_054078, intron 2 of 29) intron (NM_054078, intron 2 of 29) 4882 NM_054078 116848 Mm.252213 NM_054078 ENSMUSG00000040054 Baz2a AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314 bromodomain adjacent to zinc finger domain, 2A protein-coding common_peak2_450_5000_-0.0831762115142975_12.2464127839504_2.04007739156898 chr4 120972599 120979654 + 2.04007739156898 NA intron (NM_133716, intron 5 of 9) intron (NM_133716, intron 5 of 9) -2804 NR_105982 102465614 NR_105982 ENSMUSG00000106436 Mir7015 mmu-mir-7015 microRNA 7015 ncRNA common_peak1_76_451_0.256542578357879_8.94845025159413_2.0390147951248 chr5 41707818 41708640 + 2.0390147951248 NA promoter-TSS (NR_132325) promoter-TSS (NR_132325) -50 NM_001310590 100972 Mm.41555 NM_027295 ENSMUSG00000029128 Rab28 2700023P08Rik|AW496496 RAB28, member RAS oncogene family protein-coding common_peak1_111_976_-0.192425379577747_9.83600206217951_2.03864377528563 chr14 78913746 78915373 + 2.03864377528563 NA intron (NM_173758, intron 4 of 25) intron (NM_173758, intron 4 of 25) 65381 NM_173758 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding common_peak1_137_976_0.176992879464766_10.0207111917008_2.03859130805285 chr17 33523456 33525501 + 2.03859130805285 NA intron (NR_037707, intron 1 of 24) intron (NR_037707, intron 1 of 24) 282 NR_037708 224697 Mm.29304 NM_172619 ENSMUSG00000024299 Adamts10 9430006O18|AW045948|Adam-ts10|Adamts-10|Znmp a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10 protein-coding common_peak2_158_1173_0.162659588486346_10.2785464873532_2.03782936119333 chr16 97996221 97998546 + 2.03782936119333 NA promoter-TSS (NR_130962) promoter-TSS (NR_130962) 36 NR_130962 245305 Mm.148033 NR_130962 B230307C23Rik EG245305|OTTMUSG00000028475 RIKEN cDNA B230307C23 gene ncRNA common_peak2_43_342_-0.335654712292506_8.25423741002656_2.03773762117167 chr2 150361832 150363097 + 2.03773762117167 NA intron (NM_027017, intron 1 of 3) intron (NM_027017, intron 1 of 3) 301 NM_027017 69277 Mm.272470 NM_027017 ENSMUSG00000063364 3300002I08Rik 2900016H11Rik RIKEN cDNA 3300002I08 gene protein-coding common_peak1_90_564_0.230237985417498_9.2572260500113_2.0374401883043 chr2 29889724 29890621 + 2.0374401883043 NA 5' UTR (NM_013615, exon 1 of 17) 5' UTR (NM_013615, exon 1 of 17) 109 NM_013615 18286 Mm.330116 NM_013615 ENSMUSG00000026790 Odf2 AI848335|MMTEST29 outer dense fiber of sperm tails 2 protein-coding common_peak1_27_210_-0.43453443868926_7.50383196936256_2.03742039174596 chr19 8802248 8802975 + 2.03742039174596 NA promoter-TSS (NM_001098237) promoter-TSS (NM_001098237) 81 NM_001098237 75291 Mm.23423 NM_133759 ENSMUSG00000071661 Zbtb3 4930563M09Rik zinc finger and BTB domain containing 3 protein-coding common_peak1_20_156_-0.517146105093129_7.03604769634506_2.03712620911996 chr1 7709179 7709720 + 2.03712620911996 NA Intergenic MMVL30-int|LTR|ERV1 620529 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding common_peak1_20_156_-0.517146105093129_7.03604769634506_2.03712620911996-4 chr7 14623083 14623603 + 2.03712620911996 NA promoter-TSS (NR_045120) promoter-TSS (NR_045120) -277 NR_045119 100417675 Mm.372763 NR_045119 ENSMUSG00000041596 Nlrp5-ps Gm18756 NLR family, pyrin domain containing 5, pseudogene pseudo common_peak1_27_110_0.492148883667819_7.04049030818402_2.03712620911996-2 chr3 153764883 153765499 + 2.03712620911996 NA Intergenic Intergenic 26896 NR_045801 70594 Mm.491050 NR_045801 ENSMUSG00000062046 5730460C07Rik - RIKEN cDNA 5730460C07 gene ncRNA common_peak1_20_156_-0.517146105093129_7.03604769634506_2.03712620911996-2 chr6 125099587 125100056 + 2.03712620911996 NA intron (NM_145979, intron 2 of 38) intron (NM_145979, intron 2 of 38) 2797 NR_106012 102466272 NR_106012 ENSMUSG00000098762 Mir7045 Gm27758|mmu-mir-7045 microRNA 7045 ncRNA common_peak1_20_156_-0.517146105093129_7.03604769634506_2.03712620911996-3 chr6 129617569 129618193 + 2.03712620911996 NA intron (NM_001286018, intron 2 of 7) intron (NM_001286018, intron 2 of 7) 4802 NM_033078 27007 Mm.8217 NM_033078 ENSMUSG00000030149 Klrk1 D6H12S2489E|NKG2-D|Nkg2d killer cell lectin-like receptor subfamily K, member 1 protein-coding common_peak1_27_110_0.492148883667819_7.04049030818402_2.03712620911996 chr16 31233477 31234076 + 2.03712620911996 NA intron (NR_035427, intron 1 of 2) intron (NR_035427, intron 1 of 2) -32538 NM_030138 78618 Mm.274646 NM_030138 ENSMUSG00000049076 Acap2 4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding common_peak1_27_110_0.492148883667819_7.04049030818402_2.03712620911996-3 chr5 104958316 104958995 + 2.03712620911996 NA intron (NM_030239, intron 10 of 15) intron (NM_030239, intron 10 of 15) 24062 NM_030239 27405 Mm.389663 NM_030239 ENSMUSG00000029299 Abcg3 Abcp2|Mxr2 ATP-binding cassette, sub-family G (WHITE), member 3 protein-coding common_peak1_20_72_0.58765008491848_6.48364960133926_2.03663170368108 chr1 133798212 133798832 + 2.03663170368108 NA Intergenic Intergenic -44775 NM_213616 381290 Mm.188617 NM_213616 ENSMUSG00000026463 Atp2b4 Pmca4 ATPase, Ca++ transporting, plasma membrane 4 protein-coding common_peak1_20_72_0.58765008491848_6.48364960133926_2.03663170368108-2 chr8 13604682 13605122 + 2.03663170368108 NA intron (NM_009025, intron 4 of 23) intron (NM_009025, intron 4 of 23) -42441 NM_001080781 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak1_20_72_0.58765008491848_6.48364960133926_2.03663170368108-3 chr9 95749769 95750325 + 2.03663170368108 NA 5' UTR (NM_011643, exon 1 of 13) 5' UTR (NM_011643, exon 1 of 13) 311 NM_001311123 22063 Mm.149633 NM_011643 ENSMUSG00000032839 Trpc1 Mtrp1|Trp1|Trrp1 transient receptor potential cation channel, subfamily C, member 1 protein-coding common_peak1_96_828_-0.209889928132341_9.59028332742958_2.03421935769013 chr12 70110914 70112252 + 2.03421935769013 NA promoter-TSS (NR_104398) promoter-TSS (NR_104398) 46 NR_104398 18080 Mm.244047 NM_008697 ENSMUSG00000021068 Nin 3110068G20Rik|AI385615|AU024711|mKIAA1565 ninein protein-coding common_peak2_311_2789_0.106730976450379_11.4994148949417_2.03414527980182 chr7 79271793 79280373 + 2.03414527980182 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 2817 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak1_134_1210_-0.171669995976414_10.1561481517061_2.03399017385137 chr8 69624568 69625639 + 2.03399017385137 NA promoter-TSS (NM_001045553) promoter-TSS (NM_001045553) 72 NM_001045553 234362 Mm.458487 NM_172754 ENSMUSG00000060427 Zfp868 AI449175|AW108241|C530032E20|mszf62 zinc finger protein 868 protein-coding common_peak1_171_1299_0.154655884710847_10.4216238502712_2.03398651664566 chr10 34018663 34020601 + 2.03398651664566 NA promoter-TSS (NM_025614) promoter-TSS (NM_025614) -16 NM_025614 66521 Mm.28528 NM_025614 ENSMUSG00000019782 Rwdd1 0710001K08Rik|2610002D06Rik|2700069A07Rik|IH1 RWD domain containing 1 protein-coding common_peak1_188_1789_-0.140000196046552_10.7357437741283_2.03385702284267 chr13 64151766 64153393 + 2.03385702284267 NA intron (NM_175494, intron 1 of 4) CpG 620 NM_175494 238673 Mm.300065 NM_175494 ENSMUSG00000044934 Zfp367 8030486J21Rik|ZFF29a|ZFF29b|Znf367 zinc finger protein 367 protein-coding common_peak2_99_639_0.217311719621733_9.43058395469823_2.03375131712433 chr17 79297599 79300105 + 2.03375131712433 NA Intergenic ORR1A4|LTR|ERVL-MaLR 56239 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak2_57_463_-0.282705369428648_8.71662831041325_2.03373595773429 chr1 155416388 155417547 + 2.03373595773429 NA intron (NM_011273, intron 1 of 14) CpG 477 NM_011273 19775 Mm.266215 NM_011273 ENSMUSG00000026469 Xpr1 Rmc-1|Rmc1|Sxv|Syg1|XR xenotropic and polytropic retrovirus receptor 1 protein-coding common_peak2_266_2287_0.117281548139083_11.2185121108479_2.03290800355969 chr17 10317380 10320868 + 2.03290800355969 NA promoter-TSS (NR_037588) promoter-TSS (NR_037588) 237 NM_021881 19317 Mm.130694 NM_021881 ENSMUSG00000062078 Qk 1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1 quaking protein-coding common_peak2_57_307_0.308489085004023_8.42103108319691_2.03271851035842 chr5 105654023 105655125 + 2.03271851035842 NA Intergenic Intergenic -45395 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_555_5795_0.0743675236083838_12.5380256413611_2.03256110778948 chr17 47591856 47602238 + 2.03256110778948 NA intron (NM_007632, intron 2 of 4) intron (NM_007632, intron 2 of 4) 3580 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak2_51_411_-0.30446697135593_8.53426704150525_2.03226227397879 chr10 11148900 11150207 + 2.03226227397879 NA 5' UTR (NM_001077707, exon 1 of 30) 5' UTR (NM_001077707, exon 1 of 30) 123 NM_001284354 268281 Mm.133101 NM_172937 ENSMUSG00000090112 Shprh 2610103K11Rik|AA450458|AU024614|BC006883|D230017O13Rik|E130018M05 SNF2 histone linker PHD RING helicase protein-coding common_peak2_28_218_-0.426123745088606_7.56172518705687_2.03113773487889 chr10 81036797 81037469 + 2.03113773487889 NA Intergenic L2b|LINE|L2 -3221 NM_134135 106947 Mm.5353 NM_134135 ENSMUSG00000046822 Slc39a3 AI845814|Zip3 solute carrier family 39 (zinc transporter), member 3 protein-coding common_peak2_71_590_-0.249104335932152_9.08246215221146_2.03093292994016 chr2 65170239 65171853 + 2.03093292994016 NA intron (NM_177025, intron 1 of 13) intron (NM_177025, intron 1 of 13) 67580 NM_177025 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak2_51_265_0.326751120326099_8.21865799566424_2.03080729550799 chr14 87140362 87141764 + 2.03080729550799 NA promoter-TSS (NM_019670) promoter-TSS (NM_019670) 51 NM_019670 56419 Mm.440585 NM_019670 ENSMUSG00000022021 Diaph3 4930417P13Rik|Dia2|Diap3|Drf3|mDia2|mKIAA4117|p134MDia2 diaphanous related formin 3 protein-coding common_peak1_79_475_0.249541086695546_9.01958830665572_2.03061068577354 chr15 85645752 85647014 + 2.03061068577354 NA Intergenic Intergenic -57390 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_79_475_0.249541086695546_9.01958830665572_2.03061068577354 chr3 85161744 85163418 + 2.03061068577354 NA Intergenic Intergenic -154938 NR_040542 73283 Mm.489084 NR_040542 ENSMUSG00000099995 1700036G14Rik - RIKEN cDNA 1700036G14 gene ncRNA common_peak1_40_316_-0.346895765073982_8.13489114760242_2.03036006208442 chr11 69117486 69118340 + 2.03036006208442 NA Intergenic Intergenic -2540 NM_033041 84653 Mm.98505 NM_033041 ENSMUSG00000023781 Hes7 bHLHb37 hairy and enhancer of split 7 (Drosophila) protein-coding common_peak2_40_316_-0.346895765073982_8.13489114760242_2.03036006208442 chr6 130195168 130197038 + 2.03036006208442 NA intron (NM_013793, intron 3 of 7) PB1D9|SINE|Alu -2991 NM_010651 16640 Mm.457996 NM_010651 ENSMUSG00000033024 Klra9 LY49I1|Ly49I killer cell lectin-like receptor subfamily A, member 9 protein-coding common_peak2_41_325_-0.344641199246222_8.17640755460797_2.03021542014259 chr13 52726910 52728917 + 2.03021542014259 NA Intergenic L1M4c|LINE|L1 29292 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak2_41_325_-0.344641199246222_8.17640755460797_2.03021542014259-2 chr4 88093958 88095399 + 2.03021542014259 NA promoter-TSS (NM_001081184) promoter-TSS (NM_001081184) 48 NM_001081184 230393 Mm.287210 NM_001081184 ENSMUSG00000038368 Focad - focadhesin protein-coding common_peak2_247_2461_-0.119095908191083_11.2060670923889_2.0300588398936 chr8 4323914 4326340 + 2.0300588398936 NA promoter-TSS (NR_033527) promoter-TSS (NR_033527) -27 NM_010485 15568 Mm.119162 NM_010485 ENSMUSG00000040028 Elavl1 2410055N02Rik|HUR|Hua|W91709 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) protein-coding common_peak2_121_1077_-0.183009700519177_9.98263661249292_2.03002008215755 chr9 117901671 117903585 + 2.03002008215755 NA Intergenic Intergenic -137894 NM_001286508 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_148_1078_0.169445852619605_10.1602020757978_2.02944637716423 chr11 120149787 120151839 + 2.02944637716423 NA intron (NM_001164799, intron 1 of 15) CpG 538 NM_001164799 72055 Mm.253403 NM_024249 ENSMUSG00000061306 Slc38a10 1810073N04Rik solute carrier family 38, member 10 protein-coding unique_peak2_8_68_-0.830451406091857_5.69329875373224_2.02930105745011 chr2 26312364 26312990 + 2.02930105745011 NA Intergenic Intergenic -2856 NM_001199146 67839 Mm.266611 NM_153410 ENSMUSG00000026930 Gpsm1 1810037C22Rik|AW107933|Ags3 G-protein signalling modulator 1 (AGS3-like, C. elegans) protein-coding unique_peak2_8_68_-0.830451406091857_5.69329875373224_2.02930105745011-2 chr2 33871860 33872482 + 2.02930105745011 NA intron (NM_175184, intron 2 of 9) RMER4B|LTR|ERVK 15775 NM_175184 72543 Mm.254914 NM_175184 ENSMUSG00000038740 Mvb12b 2610200O14Rik|2610528K11Rik|AI414895|Fam125b multivesicular body subunit 12B protein-coding common_peak2_121_831_0.190692044092236_9.79578574018721_2.02888749817984 chr3 93519974 93521451 + 2.02888749817984 NA intron (NM_016740, intron 1 of 2) intron (NM_016740, intron 1 of 2) 216 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding common_peak1_136_1231_-0.170448984160043_10.1815620486149_2.02873719361448 chr17 56583187 56584600 + 2.02873719361448 NA intron (NM_001029979, intron 1 of 20) intron (NM_001029979, intron 1 of 20) 690 NM_001029979 224902 Mm.214973 NM_001029979 ENSMUSG00000042625 Safb2 AA389433|AI255170|mKIAA0138 scaffold attachment factor B2 protein-coding common_peak1_28_116_0.478298594929163_7.10951401704799_2.02853234074876 chr5 109844514 109845163 + 2.02853234074876 NA Intergenic Intergenic -10696 NR_027964 667213 Mm.454429 NR_027964 ENSMUSG00000105044 Gm10416 EG667213|ENSMUSG00000072761 zinc finger protein pseudogene pseudo common_peak1_21_163_-0.497754261924133_7.10867487365602_2.02853234074876 chr5 114707662 114708090 + 2.02853234074876 NA promoter-TSS (NM_029992) promoter-TSS (NM_029992) 97 NM_029992 77832 Mm.239698 NM_029992 ENSMUSG00000002486 Tchp A930031F18Rik|AV279199 trichoplein, keratin filament binding protein-coding common_peak1_110_966_-0.193453912112146_9.82064512342077_2.02796705365896 chr2 91729876 91730964 + 2.02796705365896 NA intron (NM_001080754, intron 1 of 18) CpG 282 NM_001080754 228361 Mm.436667 NM_172669 ENSMUSG00000040506 Ambra1 2310079H06Rik|A130023A14|AA474864|AV021921|D030051N19Rik|mKIAA1736 autophagy/beclin 1 regulator 1 protein-coding common_peak1_41_197_0.374730334905245_7.81672178753223_2.02795007996269 chr8 72189583 72190273 + 2.02795007996269 NA intron (NM_197944, intron 1 of 5) PB1D9|SINE|Alu 260 NM_197944 209488 Mm.157431 NM_197944 ENSMUSG00000062007 Hsh2d ALX|Hsh2 hematopoietic SH2 domain containing protein-coding common_peak2_212_1712_0.134984625916301_10.8098017490422_2.02778513432726 chr15 80023321 80027022 + 2.02778513432726 NA Intergenic Intergenic -10363 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak1_305_3154_-0.105006685402815_11.5709209471685_2.02774074964919 chr15 78925687 78928217 + 2.02774074964919 NA intron (NM_008495, intron 1 of 3) MIR3|SINE|MIR 227 NM_008495 16852 Mm.43831 NM_008495 ENSMUSG00000068220 Lgals1 AA410090|Gal-1|Galbp|L-14.5|L14|Lect14|galectin-1 lectin, galactose binding, soluble 1 protein-coding common_peak2_319_2881_0.10472885220145_11.5452190462755_2.02711568698003 chr17 36018863 36024867 + 2.02711568698003 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) -1305 NM_008207 15042 Mm.439654 NM_008207 ENSMUSG00000053835 H2-T24 H-2T24 histocompatibility 2, T region locus 24 protein-coding common_peak2_50_402_-0.306965251400511_8.50115340282771_2.02703366125647 chrX 74372272 74374121 + 2.02703366125647 NA non-coding (NR_103489, exon 1 of 6) non-coding (NR_103489, exon 1 of 6) 153 NM_001256104 214601 Mm.19931 NM_145406 ENSMUSG00000032806 Slc10a3 DXHXS253E|DXS253Eh|DXSmhG28|P3 solute carrier family 10 (sodium/bile acid cotransporter family), member 3 protein-coding common_peak2_56_454_-0.285224015535885_8.68711072731812_2.02653147158642 chr7 65692835 65694451 + 2.02653147158642 NA intron (NM_026795, intron 1 of 4) CpG 226 NM_026795 68634 Mm.476828 NM_026795 ENSMUSG00000078681 Tm2d3 1110025I09Rik|5930422O05Rik|Blp2 TM2 domain containing 3 protein-coding common_peak1_29_226_-0.417892054693212_7.61760245994431_2.02643853371694-2 chr16 38395418 38396135 + 2.02643853371694 NA TTS (NM_134102) TTS (NM_134102) 33586 NM_022318 64082 Mm.390856 NM_022318 ENSMUSG00000022803 Popdc2 AV006127|Pop2 popeye domain containing 2 protein-coding common_peak1_29_226_-0.417892054693212_7.61760245994431_2.02643853371694 chr14 120519494 120520034 + 2.02643853371694 NA Intergenic ORR1A2|LTR|ERVL-MaLR 41303 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding common_peak2_118_804_0.194227397237665_9.74995867162081_2.02555864005463 chr13 67374873 67376236 + 2.02555864005463 NA intron (NM_001001186, intron 1 of 3) intron (NM_001001186, intron 1 of 3) 209 NM_001001186 408065 Mm.461583 NM_001001186 ENSMUSG00000078995 Zfp456 BC065418|Rslcan-13 zinc finger protein 456 protein-coding common_peak1_159_1473_-0.154549647905226_10.4482459851425_2.02543780312717 chr1 58801996 58803807 + 2.02543780312717 NA intron (NM_001080126, intron 1 of 8) intron (NM_001080126, intron 1 of 8) 399 NM_001080126 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding common_peak1_287_2519_0.111926588230812_11.3551713125027_2.02538749005479 chr1 155972303 155974615 + 2.02538749005479 NA promoter-TSS (NM_001039184) promoter-TSS (NM_001039184) -204 NM_001039184 74081 Mm.260247 NM_001039184 ENSMUSG00000033671 Cep350 4933409L06Rik|6430546F08Rik centrosomal protein 350 protein-coding common_peak2_66_544_-0.259568719514565_8.96032805990701_2.0250598410204 chr8 70752893 70755321 + 2.0250598410204 NA promoter-TSS (NM_009001) promoter-TSS (NM_009001) -572 NM_009001 19339 Mm.5083 NM_009001 ENSMUSG00000031840 Rab3a - RAB3A, member RAS oncogene family protein-coding common_peak1_98_847_-0.206465990749034_9.62468745918868_2.02427587933221 chr8 84103987 84105537 + 2.02427587933221 NA promoter-TSS (NM_172502) promoter-TSS (NM_172502) 0 NM_172502 212123 Mm.260557 NM_172502 ENSMUSG00000037103 Dcaf15 6720484B16 DDB1 and CUL4 associated factor 15 protein-coding common_peak2_21_77_0.574395523831702_6.5725999807781_2.02417110891564 chr9 99089908 99090507 + 2.02417110891564 NA exon (NM_029094, exon 7 of 24) exon (NM_029094, exon 7 of 24) 50004 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak1_21_77_0.574395523831702_6.5725999807781_2.02417110891564 chr2 178498351 178498872 + 2.02417110891564 NA Intergenic Intergenic 68096 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak2_170_1592_-0.14889731582185_10.5630818936144_2.02412068095296 chr16 18810935 18813098 + 2.02412068095296 NA promoter-TSS (NM_009862) promoter-TSS (NM_009862) -44 NM_009862 12544 Mm.1248 NM_009862 ENSMUSG00000000028 Cdc45 Cdc45l cell division cycle 45 protein-coding common_peak1_56_300_0.310879042790472_8.38905919815494_2.02384953532629 chr4 135073858 135075124 + 2.02384953532629 NA Intergenic Intergenic -46154 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_56_300_0.310879042790472_8.38905919815494_2.02384953532629 chr4 134041523 134043165 + 2.02384953532629 NA Intergenic T-rich|Low_complexity|Low_complexity -23528 NM_145833 83557 Mm.302567 NM_145833 ENSMUSG00000050966 Lin28a AL024421|ENSMUSG00000070700|Gm10299|Lin-28|Lin28|Tex17|lin-28A lin-28 homolog A (C. elegans) protein-coding common_peak2_35_274_-0.371990135352998_7.91729274073552_2.02323775656595 chr19 40270472 40271873 + 2.02323775656595 NA intron (NM_016861, intron 1 of 6) CpG 444 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak2_30_234_-0.409834741830693_7.67159957564965_2.02314820250907 chr1 57995420 57996658 + 2.02314820250907 NA promoter-TSS (NM_199007) promoter-TSS (NM_199007) 65 NM_199007 68549 Mm.32800 NM_199007 ENSMUSG00000026039 Sgol2a 1110007N04Rik|4932411A20Rik|5730576N04Rik|AU018846|AV008062|D1Ertd8e|Sgol2|Tripin shugoshin-like 2a (S. pombe) protein-coding common_peak1_38_177_0.397210018641463_7.67433844028713_2.02314820250907 chr3 122983824 122984529 + 2.02314820250907 NA intron (NM_133857, intron 1 of 15) CpG 271 NM_133857 99526 Mm.491248 NM_133857 ENSMUSG00000039701 Usp53 AA939927|Phxr3|Sp6|mKIAA1350|mbo ubiquitin specific peptidase 53 protein-coding unique_peak2_30_234_-0.409834741830693_7.67159957564965_2.02314820250907 chr19 15924006 15925508 + 2.02314820250907 NA promoter-TSS (NM_001205339) promoter-TSS (NM_001205339) -135 NM_001205339 107272 Mm.289936 NM_177420 ENSMUSG00000024640 Psat1 D8Ertd814e|EPIP|PSA|Psat phosphoserine aminotransferase 1 protein-coding common_peak1_38_177_0.397210018641463_7.67433844028713_2.02314820250907-2 chr9 114389947 114390655 + 2.02314820250907 NA exon (NM_019922, exon 1 of 7) exon (NM_019922, exon 1 of 7) 411 NM_019922 56693 Mm.20904 NM_019922 ENSMUSG00000032431 Crtap 5730529N23Rik|CASP|Leprel3|P3h5 cartilage associated protein protein-coding unique_peak2_30_234_-0.409834741830693_7.67159957564965_2.02314820250907-2 chr9 32671777 32673060 + 2.02314820250907 NA Intergenic Intergenic -23624 NM_011808 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_30_234_-0.409834741830693_7.67159957564965_2.02314820250907-2 chr10 42054911 42055995 + 2.02314820250907 NA Intergenic Intergenic -37071 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak1_172_1613_-0.147214331785232_10.5828176973852_2.02310549639317 chr4 134495477 134497572 + 2.02310549639317 NA promoter-TSS (NM_027995) promoter-TSS (NM_027995) -237 NM_001285845 71904 Mm.142343 NM_027995 ENSMUSG00000037348 Paqr7 2310021M12Rik|AV001994|BB007237|Mpra|PGLP|mPR progestin and adipoQ receptor family member VII protein-coding common_peak1_37_291_-0.362848044296771_8.00840053673163_2.02248157931364 chr6 129679922 129680609 + 2.02248157931364 NA Intergenic Intergenic -1292 NM_010652 16641 Mm.56899 NM_010652 ENSMUSG00000030167 Klrc1 CD159a|NKG2A|NKG2B killer cell lectin-like receptor subfamily C, member 1 protein-coding unique_peak2_37_291_-0.362848044296771_8.00840053673163_2.02248157931364 chr2 113902875 113904955 + 2.02248157931364 NA Intergenic LTR37A|LTR|ERV1 -55254 NM_181416 228482 Mm.45753 NM_181416 ENSMUSG00000041219 Arhgap11a 6530401L14Rik|mKIAA0013 Rho GTPase activating protein 11A protein-coding common_peak1_66_374_0.27979691476648_8.69064524276648_2.02235527689346 chr11 101120098 101120653 + 2.02235527689346 NA promoter-TSS (NM_026501) promoter-TSS (NM_026501) 244 NM_134024 103733 Mm.479145 NM_134024 ENSMUSG00000035198 Tubg1 1500010O08Rik|AI451582|AI503389|Tubg tubulin, gamma 1 protein-coding common_peak2_66_374_0.27979691476648_8.69064524276648_2.02235527689346 chr3 101291913 101294371 + 2.02235527689346 NA Intergenic Intergenic -5203 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding common_peak1_29_122_0.466141927258463_7.17558546896847_2.02221208323421 chr11 83633659 83634359 + 2.02221208323421 NA Intergenic Intergenic 15369 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak1_29_122_0.466141927258463_7.17558546896847_2.02221208323421-2 chr11 83736632 83737396 + 2.02221208323421 NA Intergenic Intergenic -9926 NM_183249 66107 Mm.902 NM_183249 ENSMUSG00000051748 Wfdc21 1100001G20Rik|Wdnm1-like WAP four-disulfide core domain 21 protein-coding common_peak2_49_393_-0.309424316133635_8.46733966138956_2.02216724648314 chrX 20847873 20849291 + 2.02216724648314 NA promoter-TSS (NM_009703) promoter-TSS (NM_009703) 39 NM_001159645 11836 Mm.220946 NM_009703 ENSMUSG00000001127 Araf 1200013E08Rik|A-Raf|AW495444|Araf1 Araf proto-oncogene, serine/threonine kinase protein-coding common_peak1_49_393_-0.309424316133635_8.46733966138956_2.02216724648314 chr10 80697453 80698435 + 2.02216724648314 NA intron (NM_172457, intron 1 of 3) intron (NM_172457, intron 1 of 3) 3876 NM_172457 208228 Mm.49309 NM_172457 ENSMUSG00000003348 Mob3a 5330417K06Rik|A630029F06|AV218468|Mobkl2a MOB kinase activator 3A protein-coding common_peak2_274_2375_0.11507748446347_11.2718578630325_2.02199076172289 chr7 45081664 45084242 + 2.02199076172289 NA TTS (NM_026555) TTS (NM_026555) 9260 NM_026555 52377 Mm.29997 NM_026555 ENSMUSG00000019539 Rcn3 6030455P07Rik|D530026G20Rik|D7Ertd671e|RLP49 reticulocalbin 3, EF-hand calcium binding domain protein-coding common_peak1_17_133_-0.561403828585105_6.78538727616522_2.02122786738521 chr10 99171954 99172315 + 2.02122786738521 NA intron (NM_027740, intron 10 of 11) intron (NM_027740, intron 10 of 11) 63999 NM_015737 14426 Mm.314 NM_015737 ENSMUSG00000090035 Galnt4 AV011803 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 protein-coding unique_peak2_31_242_-0.401946929294257_7.72383903895865_2.02111693178074 chr7 12897502 12898463 + 2.02111693178074 NA intron (NM_001290442, intron 1 of 1) CpG 173 NM_001290441 232878 Mm.40706 NM_001001447 ENSMUSG00000054715 Zscan22 AW227621|D530006B18Rik|Hkr2 zinc finger and SCAN domain containing 22 protein-coding common_peak1_39_184_0.386365078300821_7.72456399966672_2.02111693178074-2 chr5 92375068 92375850 + 2.02111693178074 NA intron (NM_001310664, intron 2 of 10) intron (NM_001310664, intron 2 of 10) -12163 NR_038116 56066 Mm.131723 NM_019494 ENSMUSG00000060183 Cxcl11 Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1 chemokine (C-X-C motif) ligand 11 protein-coding unique_peak2_39_184_0.386365078300821_7.72456399966672_2.02111693178074 chr2 153649167 153650611 + 2.02111693178074 NA intron (NM_001271746, intron 1 of 20) CpG 440 NM_001271747 13436 Mm.89772 NM_010068 ENSMUSG00000027478 Dnmt3b MmuIIIB DNA methyltransferase 3B protein-coding common_peak1_39_184_0.386365078300821_7.72456399966672_2.02111693178074 chr13 44983897 44984644 + 2.02111693178074 NA intron (NM_025772, intron 4 of 9) intron (NM_025772, intron 4 of 9) 17826 NM_025772 94245 Mm.352311 NM_025772 ENSMUSG00000057531 Dtnbp1 5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy dystrobrevin binding protein 1 protein-coding common_peak2_78_467_0.251734371529912_8.99623190534836_2.02091689255474 chr7 72259930 72262074 + 2.02091689255474 NA intron (NM_001024703, intron 1 of 22) Lx7|LINE|L1 45593 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak2_70_581_-0.251715797061266_9.05901744437765_2.02084826318202 chr4 149484653 149486355 + 2.02084826318202 NA promoter-TSS (NM_133435) promoter-TSS (NM_133435) 171 NM_026963 69151 Mm.464434 NM_026963 ENSMUSG00000028990 Lzic 1810030J04Rik|AW047580 leucine zipper and CTNNBIP1 domain containing protein-coding common_peak1_229_1890_0.128245054208422_10.949056175054_2.02083701140149 chr2 167958009 167961265 + 2.02083701140149 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 27310 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_386_3668_0.0928250133119732_11.8875836959045_2.02066236363533 chr7 67419520 67427033 + 2.02066236363533 NA Intergenic Intergenic -50418 NM_001291195 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak1_248_2092_0.122283789065923_11.0924984907887_2.02064002969321 chr4 134093400 134095983 + 2.02064002969321 NA intron (NM_013706, intron 1 of 1) intron (NM_013706, intron 1 of 1) 382 NM_013706 23833 Mm.24130 NM_013706 ENSMUSG00000000682 Cd52 AI463198|B7|B7-Ag|CAMPATH-1|CLS1|MB7 CD52 antigen protein-coding common_peak2_33_258_-0.386659715526028_7.82347842992354_2.02033157375346 chr6 10186304 10186553 + 2.02033157375346 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat 787950 NR_033776 57866 Mm.4397 NR_033776 AA545190 - EST AA545190 ncRNA common_peak1_32_250_-0.394223606289892_7.77443175080583_2.02021544048829 chr10 86846462 86847152 + 2.02021544048829 NA intron (NM_138673, intron 66 of 68) intron (NM_138673, intron 66 of 68) 67802 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding common_peak1_32_250_-0.394223606289892_7.77443175080583_2.02021544048829-2 chr9 72492656 72493430 + 2.02021544048829 NA Intergenic L1MB8|LINE|L1 -1084 NM_009359 21778 Mm.14485 NM_009359 ENSMUSG00000090626 Tex9 Gm19407|tsec-1 testis expressed gene 9 protein-coding unique_peak2_55_445_-0.287722838716023_8.65703848056229_2.01956160491048 chr11 58223431 58225863 + 2.01956160491048 NA Intergenic Intergenic 9670 NM_019440 54396 Mm.458517 NM_019440 ENSMUSG00000069874 Irgm2 AI481100|GTPI|Ifggd2|Iigp2 immunity-related GTPase family M member 2 protein-coding common_peak2_176_1657_-0.145567370300641_10.6224446063454_2.01938564161972 chr7 114477909 114481911 + 2.01938564161972 NA intron (NM_011055, intron 1 of 15) intron (NM_011055, intron 1 of 15) 64656 NM_011055 18576 Mm.430730 NM_011055 ENSMUSG00000030671 Pde3b 9830102A01Rik|AI847709 phosphodiesterase 3B, cGMP-inhibited protein-coding common_peak2_112_751_0.200930646494763_9.65505417492502_2.0193086174858 chr6 146641746 146643534 + 2.0193086174858 NA promoter-TSS (NM_025315) promoter-TSS (NM_025315) 61 NM_025315 108098 Mm.26212 NM_025315 ENSMUSG00000030291 Med21 0610007L03Rik|AI449604|D19234|D6Ertd782e|Srb7|Surb7 mediator complex subunit 21 protein-coding common_peak2_201_1934_-0.13465734623996_10.8507891779118_2.01914427099593 chr11 118417442 118419975 + 2.01914427099593 NA intron (NM_029502, intron 1 of 4) intron (NM_029502, intron 1 of 4) 410 NM_001025617 76025 Mm.177551 NM_029502 ENSMUSG00000025575 Cant1 5830420C20Rik|Apy1h|D11Bwg0554e|Entpd8|SCAN-1|Shapy calcium activated nucleotidase 1 protein-coding common_peak1_36_283_-0.369963468293271_7.96476538535805_2.01897236577444 chr19 41364628 41365317 + 2.01897236577444 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 20098 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_36_283_-0.369963468293271_7.96476538535805_2.01897236577444-2 chr7 56049428 56050070 + 2.01897236577444 NA promoter-TSS (NM_010418) promoter-TSS (NM_010418) -406 NM_010418 15204 Mm.20929 NM_010418 ENSMUSG00000030451 Herc2 D15F32S1h|D7H15F32S1|D7H15F37S1|jdf2|mKIAA0393|rjs HECT and RLD domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak1_125_1117_-0.178483001705052_10.0374629719907_2.01875562965472 chr11 59207845 59208871 + 2.01875562965472 NA promoter-TSS (NM_024210) promoter-TSS (NM_024210) -3 NM_024210 67862 Mm.358708 NM_024210 ENSMUSG00000020441 2310033P09Rik Mmtag2 RIKEN cDNA 2310033P09 gene protein-coding common_peak1_130_1168_-0.173971952684782_10.1040732381893_2.01874264967484 chr16 87439866 87441190 + 2.01874264967484 NA promoter-TSS (NM_016924) promoter-TSS (NM_016924) 64 NM_016924 53858 Mm.162406 NM_016924 ENSMUSG00000041079 Rwdd2b ORF5 RWD domain containing 2B protein-coding common_peak1_35_158_0.418414717774668_7.52209031417169_2.01851274224295 chr17 33289583 33290175 + 2.01851274224295 NA intron (NM_001142957, intron 1 of 3) intron (NM_001142957, intron 1 of 3) 335 NM_001142957 100043468 Mm.276296 NM_001142957 ENSMUSG00000096910 Zfp955b A430003O12Rik|C430039G02Rik|C530035A18Rik|Gm4455|Zfp883b zinc finger protein 955B protein-coding common_peak1_35_158_0.418414717774668_7.52209031417169_2.01851274224295-2 chr9 32913051 32913724 + 2.01851274224295 NA intron (NR_131058, intron 1 of 3) intron (NR_131058, intron 1 of 3) 15579 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA unique_peak2_30_128_0.455454949311052_7.23895473007878_2.01787193337546 chr4 121002048 121003121 + 2.01787193337546 NA intron (NM_133716, intron 1 of 9) intron (NM_133716, intron 1 of 9) 14663 NM_133716 69780 Mm.271819 NM_133716 ENSMUSG00000032870 Smap2 1810031K02Rik|AA408614|Smap1l small ArfGAP 2 protein-coding common_peak2_37_171_0.400711759881148_7.62662063464267_2.01771004449805 chr10 20854718 20855896 + 2.01771004449805 NA Intergenic Intergenic -97240 NM_026203 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak1_37_171_0.400711759881148_7.62662063464267_2.01771004449805 chr11 72954098 72954826 + 2.01771004449805 NA Intergenic Intergenic -6707 NM_016745 53313 Mm.6306 NM_016745 ENSMUSG00000020788 Atp2a3 SERCA3b|Serca3 ATPase, Ca++ transporting, ubiquitous protein-coding common_peak1_37_171_0.400711759881148_7.62662063464267_2.01771004449805-2 chr4 127060548 127061331 + 2.01771004449805 NA intron (NM_026670, intron 1 of 7) intron (NM_026670, intron 1 of 7) 193 NM_026670 68310 Mm.273806 NM_026670 ENSMUSG00000043872 Zmym1 5830412B09Rik|AW209050 zinc finger, MYM domain containing 1 protein-coding common_peak1_48_384_-0.311838398671579_8.43279543624647_2.0176897365541 chr14 27191638 27192502 + 2.0176897365541 NA intron (NM_001289686, intron 2 of 12) intron (NM_001289686, intron 2 of 12) -45940 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_14_111_-0.625310800646256_6.49469952173448_2.01748919819404-2 chr8 113692761 113693707 + 2.01748919819404 NA Intergenic B3|SINE|B2 50021 NM_001048145 668110 Mm.390078 NM_029139 ENSMUSG00000033409 Syce1l 4930481F22Rik|MMRP|PSESS|mmrp2 synaptonemal complex central element protein 1 like protein-coding common_peak1_14_111_-0.625310800646256_6.49469952173448_2.01748919819404 chr7 143636677 143637038 + 2.01748919819404 NA 3' UTR (NM_023680, exon 7 of 7) 3' UTR (NM_023680, exon 7 of 7) -9012 NM_175649 244237 Mm.247498 NM_175649 ENSMUSG00000045362 Tnfrsf26 Tnfrh3|Tnfrsf24 tumor necrosis factor receptor superfamily, member 26 protein-coding unique_peak2_14_111_-0.625310800646256_6.49469952173448_2.01748919819404-3 chr9 119444817 119445720 + 2.01748919819404 NA intron (NM_172456, intron 1 of 5) L2b|LINE|L2 345 NM_172456 208194 Mm.101578 NM_172456 ENSMUSG00000042787 Exog AW557704|ENGL-B|ENGL-a|Endogl1|Endogl2|Engl|Engla|Englb endo/exonuclease (5'-3'), endonuclease G-like protein-coding unique_peak2_14_111_-0.625310800646256_6.49469952173448_2.01748919819404 chr18 7608399 7609022 + 2.01748919819404 NA intron (NM_001161620, intron 1 of 12) intron (NM_001161620, intron 1 of 12) 18153 NM_001081287 75739 Mm.133293 NM_001081287 ENSMUSG00000057440 Mpp7 1110068J02Rik|2810038M04Rik|5430426E14Rik|AI415104|Gm955 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) protein-coding common_peak1_213_1723_0.13403867145303_10.8185633948156_2.01726883791684 chr8 72318539 72321154 + 2.01726883791684 NA exon (NM_008452, exon 2 of 3) exon (NM_008452, exon 2 of 3) 784 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_180_1701_-0.143808006209602_10.6611113185812_2.01639957684373 chr7 19561484 19563176 + 2.01639957684373 NA promoter-TSS (NM_199149) promoter-TSS (NM_199149) 68 NM_199149 232947 Mm.219662 NM_199149 ENSMUSG00000051403 Ppp1r37 Gm158|Lrrc68 protein phosphatase 1, regulatory subunit 37 protein-coding common_peak2_34_152_0.424057871830882_7.46941677860809_2.01595217968747 chr15 86087310 86088477 + 2.01595217968747 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 29166 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_34_152_0.424057871830882_7.46941677860809_2.01595217968747 chr3 96904850 96905540 + 2.01595217968747 NA exon (NM_026229, exon 1 of 14) exon (NM_026229, exon 1 of 14) 103 NM_026229 67549 Mm.46722 NM_026229 ENSMUSG00000028096 Gpr89 4933412D19Rik|Gpr89a|SH120 G protein-coupled receptor 89 protein-coding unique_peak2_34_152_0.424057871830882_7.46941677860809_2.01595217968747 chr2 69994124 69995486 + 2.01595217968747 NA intron (NM_001303033, intron 29 of 38) intron (NM_001303033, intron 29 of 38) -44321 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding common_peak1_88_548_0.232356029758989_9.21684035388469_2.01552751325773 chr2 155955944 155957158 + 2.01552751325773 NA promoter-TSS (NM_008383) promoter-TSS (NM_008383) -7 NM_001129999 16328 Mm.288729 NM_008383 ENSMUSG00000038241 Cep250 AW490617|B230210E21Rik|Cep2|Inmp centrosomal protein 250 protein-coding common_peak1_542_5626_0.0751915835720887_12.4957460398436_2.01532397886466 chr4 129808896 129813556 + 2.01532397886466 NA Intergenic Intergenic -9253 NM_008974 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding unique_peak2_31_134_0.446049977260693_7.29984058568118_2.01526687639932 chr2 78992027 78993293 + 2.01526687639932 NA Intergenic Intergenic 123613 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_31_134_0.446049977260693_7.29984058568118_2.01526687639932 chr17 32829634 32830406 + 2.01526687639932 NA intron (NM_001293229, intron 1 of 2) intron (NM_001293229, intron 1 of 2) 241 NM_001293229 240064 Mm.476307 NM_177359 ENSMUSG00000095253 Zfp799 6030490I01Rik zinc finger protein 799 protein-coding common_peak2_31_134_0.446049977260693_7.29984058568118_2.01526687639932-2 chr7 99381404 99382266 + 2.01526687639932 NA 5' UTR (NM_201352, exon 1 of 18) 5' UTR (NM_201352, exon 1 of 18) 286 NM_201352 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding common_peak1_122_1086_-0.180558443808598_9.99585700312301_2.0147818875712 chr3 131018962 131020339 + 2.0147818875712 NA Intergenic Intergenic -90647 NM_010703 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_94_808_-0.211526102154766_9.55423284135259_2.01448757522982 chr10 128922575 128924243 + 2.01448757522982 NA exon (NM_015740, exon 1 of 4) exon (NM_015740, exon 1 of 4) 115 NM_015740 14533 Mm.30118 NM_015740 ENSMUSG00000090247 Bloc1s1 AI839753|BLOS1|Gcn5l1 biogenesis of lysosomal organelles complex-1, subunit 1 protein-coding common_peak1_33_146_0.430476227324163_7.41491045849845_2.01446887577809 chr8 119422387 119423152 + 2.01446887577809 NA Intergenic Intergenic -14393 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak2_69_571_-0.251813311068499_9.03396468124414_2.01411264148697 chr5 141043367 141045056 + 2.01411264148697 NA Intergenic Intergenic -43615 NM_175362 108723 Mm.46187 NM_175362 ENSMUSG00000036526 Card11 0610008L17Rik|2410011D02Rik|BIMP3|CARMA1 caspase recruitment domain family, member 11 protein-coding common_peak2_47_375_-0.314201072399186_8.39748831547804_2.01363053129037 chrX 36902494 36904174 + 2.01363053129037 NA promoter-TSS (NM_029891) promoter-TSS (NM_029891) -435 NM_029891 77286 Mm.21649 NM_029891 ENSMUSG00000044149 Nkrf 9430034D17Rik|AW124770|C80287 NF-kappaB repressing factor protein-coding common_peak1_36_165_0.404744219864486_7.57741154127917_2.01303804170368 chr3 40894199 40894825 + 2.01303804170368 NA intron (NM_026622, intron 1 of 12) CpG 235 NM_026622 269423 Mm.32373 NM_026622 ENSMUSG00000037818 Abhd18 2310068E01Rik|3110057O12Rik|AI645591 abhydrolase domain containing 18 protein-coding common_peak2_54_436_-0.290198451114684_8.62639024394326_2.01284148749763 chr8 3620648 3622034 + 2.01284148749763 NA promoter-TSS (NM_001195244) promoter-TSS (NM_001195244) -45 NM_026156 67439 Mm.23739 NM_026156 ENSMUSG00000019470 Xab2 0610041O14Rik|AV025587 XPA binding protein 2 protein-coding common_peak1_144_1314_-0.164078182788774_10.2788079927853_2.01257935115793 chr7 128739590 128740707 + 2.01257935115793 NA exon (NM_145955, exon 1 of 16) exon (NM_145955, exon 1 of 16) 281 NM_145955 210711 Mm.58882 NM_145955 ENSMUSG00000048170 Mcmbp 1110007A13Rik|AU017382|BC025641|MCM-BP minichromosome maintenance complex binding protein protein-coding common_peak2_48_244_0.340238297908114_8.10675708795663_2.01248064923409 chr14 74645852 74647198 + 2.01248064923409 NA intron (NM_172812, intron 2 of 2) intron (NM_172812, intron 2 of 2) 5685 NM_172812 15558 Mm.214351 NM_172812 ENSMUSG00000034997 Htr2a E030013E04|Htr-2|Htr2 5-hydroxytryptamine (serotonin) receptor 2A protein-coding common_peak2_17_57_0.646704366745095_6.18133317850012_2.01236895003105 chr3 95427584 95427996 + 2.01236895003105 NA intron (NR_033637, intron 1 of 2) CpG 441 NR_033637 100043305 Mm.412052 NR_033637 Gm4349 - SET domain, bifurcated 1 pseudogene pseudo common_peak1_17_57_0.646704366745095_6.18133317850012_2.01236895003105-2 chr16 11500132 11500541 + 2.01236895003105 NA intron (NM_001290148, intron 6 of 13) RMER19A|LTR|ERVK 94688 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak1_17_57_0.646704366745095_6.18133317850012_2.01236895003105-3 chr7 126746382 126746808 + 2.01236895003105 NA Intergenic Intergenic -13031 NM_011952 26417 Mm.8385 NM_011952 ENSMUSG00000063065 Mapk3 Erk-1|Erk1|Ert2|Esrk1|Mnk1|Mtap2k|Prkm3|p44|p44erk1|p44mapk mitogen-activated protein kinase 3 protein-coding common_peak1_17_57_0.646704366745095_6.18133317850012_2.01236895003105 chr12 25993825 25994129 + 2.01236895003105 NA Intergenic B3A|SINE|B2 216528 NR_131149 629481 Mm.390460 NR_131149 Gm29687 - predicted gene, 29687 ncRNA common_peak1_17_57_0.646704366745095_6.18133317850012_2.01236895003105-4 chr7 142368629 142369065 + 2.01236895003105 NA intron (NM_177265, intron 2 of 3) intron (NM_177265, intron 2 of 3) 3412 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak2_100_648_0.214773525606319_9.4494614308023_2.0114472688039 chr7 38226204 38228398 + 2.0114472688039 NA intron (NM_024413, intron 1 of 1) intron (NM_024413, intron 1 of 1) 693 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding common_peak2_103_674_0.209902175075451_9.50369477947592_2.01124612633058 chr14 78535965 78537644 + 2.01124612633058 NA promoter-TSS (NM_001164503) promoter-TSS (NM_001164503) 56 NM_001164503 219181 Mm.89413 NM_001164503 ENSMUSG00000022016 Akap11 6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629 A kinase (PRKA) anchor protein 11 protein-coding common_peak2_65_367_0.280370302790224_8.66374710745212_2.01108930682756-2 chr16 29579168 29580304 + 2.01108930682756 NA intron (NM_133752, intron 1 of 28) intron (NM_133752, intron 1 of 28) 402 NM_001199177 74143 Mm.274285 NM_133752 ENSMUSG00000038084 Opa1 1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567 OPA1, mitochondrial dynamin like GTPase protein-coding common_peak2_65_367_0.280370302790224_8.66374710745212_2.01108930682756-3 chr6 85332818 85334028 + 2.01108930682756 NA promoter-TSS (NM_178639) promoter-TSS (NM_178639) -1 NM_178639 94282 Mm.121485 NM_178639 ENSMUSG00000033720 Sfxn5 C230001H08Rik sideroflexin 5 protein-coding common_peak2_65_367_0.280370302790224_8.66374710745212_2.01108930682756 chr10 41892688 41894688 + 2.01108930682756 NA intron (NM_001013370, intron 1 of 9) intron (NM_001013370, intron 1 of 9) 6249 NM_001013370 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding common_peak2_546_5679_0.0746547672727793_12.5090025980284_2.01085891480964 chr8 25599642 25604693 + 2.01085891480964 NA promoter-TSS (NM_001001735) promoter-TSS (NM_001001735) -117 NM_001001735 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Whsc1l1 6720429E03|A530023P05|AI528490|NSD3|WHISTLE Wolf-Hirschhorn syndrome candidate 1-like 1 (human) protein-coding unique_peak2_22_171_-0.487803950608588_7.1823627793978_2.01039716380442 chr19 8926306 8927438 + 2.01039716380442 NA TTS (NM_009073) TTS (NM_009073) 2484 NM_009073 19881 Mm.426094 NM_009073 ENSMUSG00000071648 Rom1 M101156|Rgsc1156|Rom-1|Rosp1|Tspan23 rod outer segment membrane protein 1 protein-coding common_peak1_22_171_-0.487803950608588_7.1823627793978_2.01039716380442 chr15 60149274 60149874 + 2.01039716380442 NA Intergenic (GGAGAA)n|Simple_repeat|Simple_repeat -132956 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding unique_peak2_22_171_-0.487803950608588_7.1823627793978_2.01039716380442-2 chr4 148633160 148634546 + 2.01039716380442 NA Intergenic RLTR30|LTR|ERV1 -6857 NM_001003899 230908 Mm.22453 NM_145556 ENSMUSG00000041459 Tardbp 1190002A23Rik|C85084|TDP-43|Tdp43 TAR DNA binding protein protein-coding unique_peak2_12_96_-0.671103908732551_6.26436088782085_2.00965219411469 chr9 104001797 104002592 + 2.00965219411469 NA promoter-TSS (NM_028721) promoter-TSS (NM_028721) -350 NM_172460 74025 Mm.479273 NM_028721 ENSMUSG00000032558 Nphp3 3632410F03Rik|AI550417|C230078J01|D330020E01Rik|pcy nephronophthisis 3 (adolescent) protein-coding common_peak1_12_96_-0.671103908732551_6.26436088782085_2.00965219411469 chr6 146220928 146221322 + 2.00965219411469 NA intron (NM_019923, intron 45 of 56) intron (NM_019923, intron 45 of 56) 281098 NM_010586 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak2_190_1489_0.143274890637271_10.6127340606682_2.00906887982878 chr1 173940303 173943435 + 2.00906887982878 NA intron (NM_001302650, intron 2 of 8) intron (NM_001302650, intron 2 of 8) 623 NM_001302649 15950 Mm.463437 NM_008328 ENSMUSG00000039997 Ifi203 Mndal interferon activated gene 203 protein-coding common_peak2_77_460_0.250932820364879_8.97408935061178_2.00792856420309 chr3 65665581 65666761 + 2.00792856420309 NA promoter-TSS (NM_001037923) promoter-TSS (NM_001037923) -57 NM_001037923 624866 Mm.296317 NM_001037923 ENSMUSG00000074579 Lekr1 EG546798|EG624866|Gm6534 leucine, glutamate and lysine rich 1 protein-coding common_peak2_77_460_0.250932820364879_8.97408935061178_2.00792856420309-2 chr5 127616463 127617893 + 2.00792856420309 NA exon (NM_133895, exon 1 of 8) exon (NM_133895, exon 1 of 8) 214 NM_133895 100561 Mm.28506 NM_133895 ENSMUSG00000029416 Slc15a4 AA987064|AW742963|C130069N12Rik|PHT1|PTR4 solute carrier family 15, member 4 protein-coding common_peak1_47_237_0.345570015970508_8.0676027712932_2.00730800035173 chr8 107291434 107292325 + 2.00730800035173 NA intron (NR_039557, intron 2 of 3).3 intron (NR_039557, intron 2 of 3).3 -1591 NM_018823 54446 Mm.390057 NM_018823 ENSMUSG00000003847 Nfat5 AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz nuclear factor of activated T cells 5 protein-coding common_peak2_47_237_0.345570015970508_8.0676027712932_2.00730800035173 chr8 72189462 72190527 + 2.00730800035173 NA intron (NM_197944, intron 1 of 5) intron (NM_197944, intron 1 of 5) 326 NM_197944 209488 Mm.157431 NM_197944 ENSMUSG00000062007 Hsh2d ALX|Hsh2 hematopoietic SH2 domain containing protein-coding common_peak1_162_1213_0.158291737665689_10.3246985750885_2.00694551102332 chr5 140321164 140322337 + 2.00694551102332 NA promoter-TSS (NM_010752) promoter-TSS (NM_010752) -198 NM_010752 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding common_peak2_54_286_0.316384091710228_8.3230989725308_2.00690024428814 chr7 41598562 41600106 + 2.00690024428814 NA Intergenic CpG -34197 NM_023363 67607 Mm.384626 NM_023363 ENSMUSG00000074165 Zfp788 2810426N06Rik|AI256342|AI605193 zinc finger protein 788 protein-coding common_peak1_80_674_-0.232401608945315_9.28254288746554_2.00679001202443 chr8 128595265 128596337 + 2.00679001202443 NA Intergenic URR1A|DNA|hAT-Charlie -89853 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_64_526_-0.264744631304318_8.90928683598506_2.0065442458041 chr16 78199527 78200599 + 2.0065442458041 NA Intergenic Intergenic 55391 NR_045698 100503619 Mm.387531 NR_045698 ENSMUSG00000109841 E330011O21Rik - RIKEN cDNA E330011O21 gene ncRNA common_peak1_90_769_-0.216369592862216_9.48052983915116_2.00640669047944 chr7 17026595 17028143 + 2.00640669047944 NA intron (NM_011155, intron 1 of 12) intron (NM_011155, intron 1 of 12) 545 NM_011155 19060 Mm.3294 NM_011155 ENSMUSG00000003099 Ppp5c AU020526|PP5 protein phosphatase 5, catalytic subunit protein-coding common_peak2_308_2757_0.106275658416042_11.482544570722_2.00583204026479 chr9 108001570 108004004 + 2.00583204026479 NA 5' UTR (NM_013785, exon 1 of 6) 5' UTR (NM_013785, exon 1 of 6) 139 NM_013785 27399 Mm.276155 NM_013785 ENSMUSG00000032594 Ip6k1 1200016D08Rik|AU022776|Ihpk1|InsP6|InsP6k1|Itpk6 inositol hexaphosphate kinase 1 protein-coding common_peak1_233_2297_-0.122472805698612_11.1049266797968_2.00580695877336 chr6 86607189 86609477 + 2.00580695877336 NA Intergenic Intergenic -19841 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak1_59_481_-0.277620592445901_8.77407904000701_2.00541941559877 chr11 68198061 68198748 + 2.00541941559877 NA intron (NM_018768, intron 7 of 7) GA-rich|Low_complexity|Low_complexity -22488 NR_105833 102465219 NR_105833 ENSMUSG00000099174 Mir6406 Gm27981|mmu-mir-6406 microRNA 6406 ncRNA common_peak1_14_43_0.722612502774051_5.82073787002432_2.00509512107874-3 chr9 32741224 32741599 + 2.00509512107874 NA intron (NM_011808, intron 6 of 7) intron (NM_011808, intron 6 of 7) 45369 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_14_43_0.722612502774051_5.82073787002432_2.00509512107874-2 chr4 63392354 63392660 + 2.00509512107874 NA intron (NM_001305432, intron 2 of 20) intron (NM_001305432, intron 2 of 20) 5733 NM_001305432 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak1_14_43_0.722612502774051_5.82073787002432_2.00509512107874 chr10 96333181 96333553 + 2.00509512107874 NA Intergenic Intergenic 107160 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA unique_peak1_14_43_0.722612502774051_5.82073787002432_2.00509512107874 chr10 117923157 117923549 + 2.00509512107874 NA Intergenic B4A|SINE|B4 -2106 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_231_2274_-0.123150581901786_11.0900755390225_2.00492477478388 chr6 42341725 42345561 + 2.00492477478388 NA Intergenic Intergenic -6185 NM_011777 22793 Mm.282303 NM_011777 ENSMUSG00000029860 Zyx 9530098H06Rik|R75157 zyxin protein-coding common_peak1_99_856_-0.203911579603405_9.6411956043108_2.00485741833146 chr15 97355133 97356703 + 2.00485741833146 NA intron (NM_172293, intron 3 of 5) intron (NM_172293, intron 3 of 5) -108631 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak2_99_856_-0.203911579603405_9.6411956043108_2.00485741833146 chr15 78580894 78582491 + 2.00485741833146 NA Intergenic Intergenic -8909 NM_009008 19354 Mm.1972 NM_009008 ENSMUSG00000033220 Rac2 AI323801|AI452260 RAS-related C3 botulinum substrate 2 protein-coding common_peak1_46_367_-0.320430868630995_8.36334652174152_2.00483841021303 chr16 97309832 97310517 + 2.00483841021303 NA Intergenic Intergenic -46554 NM_019517 56175 Mm.97885 NM_019517 ENSMUSG00000040605 Bace2 1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP1|ASP21|BAE2|CDA13|CEAP1|DRAP beta-site APP-cleaving enzyme 2 protein-coding common_peak2_183_1733_-0.141590445569255_10.6890929604372_2.00478247548562 chr7 30562205 30564436 + 2.00478247548562 NA promoter-TSS (NM_025498) promoter-TSS (NM_025498) -20 NM_170760 233073 Mm.34790 NM_170760 ENSMUSG00000078765 U2af1l4 AA407033|AF419339|AI451269|AW553050|U2af26 U2 small nuclear RNA auxiliary factor 1-like 4 protein-coding common_peak1_93_798_-0.212308294315601_9.53589754577018_2.0046818099847 chr16 91446475 91447982 + 2.0046818099847 NA Intergenic Intergenic -17876 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak1_76_636_-0.238428021483234_9.19593555151468_2.00465038691988 chr1 54871092 54872670 + 2.00465038691988 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 54506 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding unique_peak2_18_140_-0.539187149001903_6.86995777789784_2.00456418241193 chr2 18182551 18183769 + 2.00456418241193 NA intron (NR_045538, intron 13 of 22) intron (NR_045538, intron 13 of 22) 118575 NM_001252561 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding common_peak2_525_6004_-0.0748952001311824_12.5145009305274_2.00443009671175 chr15 8441744 8447214 + 2.00443009671175 NA promoter-TSS (NM_027707) promoter-TSS (NM_027707) -16 NM_201232 71175 Mm.240329 NM_027707 ENSMUSG00000022141 Nipbl Idn3 Nipped-B homolog (Drosophila) protein-coding common_peak1_72_599_-0.246499664110253_9.10556885844075_2.00268612315083 chr9 107333912 107334485 + 2.00268612315083 NA intron (NM_133984, intron 4 of 10) intron (NM_133984, intron 4 of 10) 4152 NM_133984 69536 Mm.259467 NM_133984 ENSMUSG00000032579 Hemk1 2310008M14Rik|AW049265 HemK methyltransferase family member 1 protein-coding common_peak1_116_787_0.19502614630477_9.71956489260876_2.00262577611002 chr6 132463609 132463912 + 2.00262577611002 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -99625 NM_053251 114600 Mm.428480 NM_053251 Gm4736 EG114600|Mp4|Mp6 predicted gene 4736 protein-coding common_peak2_126_1127_-0.177340658224749_10.0508810232864_2.00256879943104 chr19 60894409 60897095 + 2.00256879943104 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 6003 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding unique_peak2_10_82_-0.741853999839329_6.00411243142726_2.00246661640303-4 chr17 18898716 18899342 + 2.00246661640303 NA Intergenic MMVL30-int|LTR|ERV1 -15293 NM_001104549 627367 Mm.384131 NM_001104549 ENSMUSG00000091491 Vmn2r97 EG627367|Vn2r97 vomeronasal 2, receptor 97 protein-coding unique_peak2_10_82_-0.741853999839329_6.00411243142726_2.00246661640303 chr1 106515769 106516489 + 2.00246661640303 NA Intergenic Intergenic 30502 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA unique_peak2_10_82_-0.741853999839329_6.00411243142726_2.00246661640303-2 chr12 20989887 20990467 + 2.00246661640303 NA Intergenic Intergenic -121579 NM_001004364 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding unique_peak2_10_82_-0.741853999839329_6.00411243142726_2.00246661640303-5 chr8 105801760 105802459 + 2.00246661640303 NA intron (NM_145824, intron 3 of 13) intron (NM_145824, intron 3 of 13) 25241 NM_145824 74334 Mm.4206 NM_145824 ENSMUSG00000037415 Ranbp10 4432417N03Rik RAN binding protein 10 protein-coding unique_peak2_10_82_-0.741853999839329_6.00411243142726_2.00246661640303-3 chr16 13159172 13159961 + 2.00246661640303 NA Intergenic Intergenic 49830 NM_015769 50505 Mm.287837 NM_015769 ENSMUSG00000022545 Ercc4 AI606920|Xpf excision repair cross-complementing rodent repair deficiency, complementation group 4 protein-coding unique_peak2_10_82_-0.741853999839329_6.00411243142726_2.00246661640303-6 chr9 108597154 108597832 + 2.00246661640303 NA exon (NM_028944, exon 1 of 9) exon (NM_028944, exon 1 of 9) 107 NM_028944 74443 Mm.226534 NM_028944 ENSMUSG00000006675 P4htm 4933406E20Rik|AI853847|BB128974|Ph-4 prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) protein-coding common_peak2_90_565_0.227686799888165_9.25850164277596_2.00111258465735 chr13 52993791 52996256 + 2.00111258465735 NA Intergenic Intergenic -13984 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_44_349_-0.325032474267697_8.28869487469848_1.99885772777235-2 chr15 75642197 75642921 + 1.99885772777235 NA Intergenic Intergenic 25875 NM_011759 22701 Mm.87210 NM_011759 ENSMUSG00000047003 Zfp41 CTfin92|Zfp-41 zinc finger protein 41 protein-coding common_peak1_44_349_-0.325032474267697_8.28869487469848_1.99885772777235 chr13 20792882 20793887 + 1.99885772777235 NA promoter-TSS (NM_012054) promoter-TSS (NM_012054) -729 NM_001281854 27052 Mm.314046 NM_012054 ENSMUSG00000021322 Aoah 4930433E13Rik acyloxyacyl hydrolase protein-coding common_peak1_22_83_0.546143381314749_6.66538911343614_1.99837208065855 chr1 172515013 172515481 + 1.99837208065855 NA Intergenic Intergenic -5883 NM_027972 71870 Mm.78373 NM_027972 ENSMUSG00000026546 Cfap45 1700028D05Rik|Ccdc19|Nesg1 cilia and flagella associated protein 45 protein-coding common_peak2_22_83_0.546143381314749_6.66538911343614_1.99837208065855 chr3 68691077 68691819 + 1.99837208065855 NA promoter-TSS (NM_008351) promoter-TSS (NM_008351) 24 NM_008351 16159 Mm.103783 NM_008351 ENSMUSG00000027776 Il12a IL-12p35|Il-12a|Ll12a|p35 interleukin 12a protein-coding common_peak1_22_83_0.546143381314749_6.66538911343614_1.99837208065855-3 chr4 141859538 141860038 + 1.99837208065855 NA exon (NM_025994, exon 4 of 4) exon (NM_025994, exon 4 of 4) -13429 NM_001033875 76701 Mm.489680 NM_001033875 ENSMUSG00000062478 Ctrc 1810044E12Rik chymotrypsin C (caldecrin) protein-coding common_peak1_22_83_0.546143381314749_6.66538911343614_1.99837208065855-2 chr18 66002098 66002610 + 1.99837208065855 NA intron (NM_027400, intron 1 of 13) CpG 281 NM_027400 70361 Mm.290857 NM_027400 ENSMUSG00000041891 Lman1 2610020P13Rik|AI326273|AU043785|C730041J05|ERGIC53|F5F8D|MCFD1|MR60|P58|gp58 lectin, mannose-binding, 1 protein-coding common_peak2_58_472_-0.280169968297569_8.74561138919061_1.99744321273751 chr2 73385650 73387392 + 1.99744321273751 NA promoter-TSS (NM_001276444) promoter-TSS (NM_001276444) -41 NM_001276444 68526 Mm.451014 NM_001080707 ENSMUSG00000041762 Gpr155 1110017O10Rik|DEPDC3|F730029F15Rik|PGR22 G protein-coupled receptor 155 protein-coding common_peak1_68_390_0.271570522939442_8.74681005877707_1.99744321273751 chr11 51880414 51881616 + 1.99744321273751 NA Intergenic Intergenic -23534 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak1_46_231_0.345150092298446_8.03055604127679_1.99616835869474 chr13 51935858 51936547 + 1.99616835869474 NA Intergenic Intergenic 89527 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_174_1330_0.151256445489963_10.4539230786569_1.99568733585171 chr9 108346698 108348796 + 1.99568733585171 NA promoter-TSS (NM_011678) promoter-TSS (NM_011678) -84 NM_001311157 22258 Mm.3974 NM_011678 ENSMUSG00000032612 Usp4 F730026I20Rik|Unp|mKIAA4155 ubiquitin specific peptidase 4 (proto-oncogene) protein-coding common_peak2_71_589_-0.246661160003825_9.08124056424729_1.99544889224554 chr3 85126261 85128279 + 1.99544889224554 NA Intergenic Lx8|LINE|L1 -161690 NM_001040461 654362 Mm.466598 NM_001040461 Fbxw7as1 Dear|Dear1|Despr F-box and WD-40 domain protein 7 antisense transcript 1 ncRNA common_peak1_152_1118_0.163810972304347_10.2098998071286_1.99519475437327 chr9 13748441 13749865 + 1.99519475437327 NA promoter-TSS (NM_023858) promoter-TSS (NM_023858) -28 NM_023858 77116 Mm.210405 NM_023858 ENSMUSG00000031918 Mtmr2 6030445P13Rik myotubularin related protein 2 protein-coding common_peak2_92_788_-0.213064769125868_9.51734910545052_1.99491820454221 chr2 84726606 84728275 + 1.99491820454221 NA promoter-TSS (NM_133840) promoter-TSS (NM_133840) -172 NM_133840 98985 Mm.21583 NM_133840 ENSMUSG00000027079 Clp1 AI462438|Heab CLP1, cleavage and polyadenylation factor I subunit protein-coding common_peak1_67_553_-0.256981282702306_8.98525152469804_1.99446705246466 chr11 119942954 119943757 + 1.99446705246466 NA intron (NM_130862, intron 1 of 13) CpG 263 NM_130862 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding common_peak1_273_2366_0.114105876986603_11.2658969292279_1.99423801284284 chr10 77529616 77532734 + 1.99423801284284 NA intron (NM_008404, intron 1 of 15) intron (NM_008404, intron 1 of 15) 827 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding common_peak2_86_532_0.234806107906676_9.17539477671252_1.99382917023564 chr2 125858271 125859541 + 1.99382917023564 NA promoter-TSS (NM_175154) promoter-TSS (NM_175154) 176 NM_009939 12848 Mm.3596 NM_009939 ENSMUSG00000027206 Cops2 AI315723|C85265|Csn2|Sgn2|TRIP-15|Trip15 COP9 signalosome subunit 2 protein-coding common_peak2_86_532_0.234806107906676_9.17539477671252_1.99382917023564-2 chr4 136020515 136021788 + 1.99382917023564 NA intron (NM_013736, intron 1 of 10) CpG 498 NM_013736 27224 Mm.27663 NM_013736 ENSMUSG00000028668 Eloa 110kDa|AA408125|Tceb3|Tceb3a elongin A protein-coding unique_peak2_24_186_-0.460879267751253_7.31645482601201_1.99379707629036 chr18 82913159 82914320 + 1.99379707629036 NA promoter-TSS (NM_001177464) promoter-TSS (NM_001177464) -893 NM_001177464 329003 Mm.326526 NM_183033 ENSMUSG00000058881 Zfp516 C330029B10Rik|D230016L03|Zfp26l|Znf516|mKIAA0222 zinc finger protein 516 protein-coding common_peak1_23_88_0.538042037125697_6.74475444952925_1.99332458743494-3 chr4 59228934 59229533 + 1.99332458743494 NA Intergenic Lx8|LINE|L1 -30818 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_23_88_0.538042037125697_6.74475444952925_1.99332458743494 chr17 86978105 86978745 + 1.99332458743494 NA intron (NM_145491, intron 2 of 4) intron (NM_145491, intron 2 of 4) 15314 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak2_23_88_0.538042037125697_6.74475444952925_1.99332458743494 chr11 86598681 86599263 + 1.99332458743494 NA intron (NM_029478, intron 10 of 11) ID_B1|SINE|B4 -14814 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_23_88_0.538042037125697_6.74475444952925_1.99332458743494-2 chr3 85126330 85126922 + 1.99332458743494 NA Intergenic LTR84b|LTR|ERVL -161046 NM_001040461 654362 Mm.466598 NM_001040461 Fbxw7as1 Dear|Dear1|Despr F-box and WD-40 domain protein 7 antisense transcript 1 ncRNA common_peak1_63_352_0.285953512226699_8.60650112938453_1.99325915562015 chr16 29579108 29580090 + 1.99325915562015 NA intron (NM_133752, intron 1 of 28) intron (NM_133752, intron 1 of 28) 265 NM_001199177 74143 Mm.274285 NM_133752 ENSMUSG00000038084 Opa1 1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567 OPA1, mitochondrial dynamin like GTPase protein-coding common_peak1_63_352_0.285953512226699_8.60650112938453_1.99325915562015-2 chr3 89233013 89234302 + 1.99325915562015 NA TTS (NM_183037) TTS (NM_183037) 4601 NM_013605 17829 Mm.16193 NM_013605 ENSMUSG00000042784 Muc1 CD227|EMA|Muc-1 mucin 1, transmembrane protein-coding common_peak2_62_507_-0.267075526820383_8.85514692336197_1.99218735523722 chr5 75065997 75067991 + 1.99218735523722 NA Intergenic Intergenic -8607 NM_133256 14843 Mm.218752 NM_133256 ENSMUSG00000035946 Gsx2 Gsh-2|Gsh2 GS homeobox 2 protein-coding common_peak1_45_224_0.351291924062828_7.98942715324845_1.99193828062844 chr9 67840291 67840976 + 1.99193828062844 NA intron (NM_177184, intron 1 of 84) CpG 237 NM_177184 320528 Mm.241454 NM_177184 ENSMUSG00000035284 Vps13c AI552542|AV026040|C230055H22Rik|W51662|chorein vacuolar protein sorting 13C protein-coding common_peak1_19_147_-0.518319137998174_6.95029379662986_1.99140909626453 chr10 20834907 20835347 + 1.99140909626453 NA Intergenic B1_Mus2|SINE|Alu -110059 NM_013875 29863 Mm.425617 NM_013875 ENSMUSG00000019990 Pde7b - phosphodiesterase 7B protein-coding common_peak2_19_147_-0.518319137998174_6.95029379662986_1.99140909626453 chr19 46598261 46598906 + 1.99140909626453 NA promoter-TSS (NM_001177812) promoter-TSS (NM_001177812) -523 NM_001177812 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding unique_peak2_19_147_-0.518319137998174_6.95029379662986_1.99140909626453 chr19 17384860 17386016 + 1.99140909626453 NA Intergenic ID4_|SINE|ID -8605 NM_019437 54391 Mm.7013 NM_019437 ENSMUSG00000024712 Rfk 0610038L10Rik|AF031381|KOI-4 riboflavin kinase protein-coding common_peak1_19_147_-0.518319137998174_6.95029379662986_1.99140909626453-2 chr10 21234900 21235404 + 1.99140909626453 NA Intergenic Intergenic -60827 NM_001042593 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak1_109_954_-0.19145359335084_9.80363012624769_1.99139418690599 chr9 44878689 44880095 + 1.99139418690599 NA intron (NM_001081049, intron 1 of 35) intron (NM_001081049, intron 1 of 35) 1882 NM_001081049 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak2_79_476_0.246513393997978_9.0211021530045_1.99113186507593 chr2 152804063 152807065 + 1.99113186507593 NA intron (NM_009743, intron 2 of 2) URR1A|DNA|hAT-Charlie 25153 NM_001289716 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_52_272_0.32298462452326_8.25424945318148_1.99113159163993-2 chr3 108257223 108257956 + 1.99113159163993 NA intron (NM_011967, intron 1 of 8) intron (NM_011967, intron 1 of 8) 663 NM_011967 26442 Mm.208883 NM_011967 ENSMUSG00000068749 Psma5 ZETA proteasome (prosome, macropain) subunit, alpha type 5 protein-coding unique_peak2_52_272_0.32298462452326_8.25424945318148_1.99113159163993 chr2 60867015 60868980 + 1.99113159163993 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 13441 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak1_52_272_0.32298462452326_8.25424945318148_1.99113159163993 chr12 82469891 82470937 + 1.99113159163993 NA Intergenic Intergenic -146511 NM_001310478 50779 Mm.126176 NM_015812 ENSMUSG00000021219 Rgs6 - regulator of G-protein signaling 6 protein-coding common_peak1_160_1482_-0.152305969095652_10.4581498979068_1.99086852151718 chr7 141228170 141229475 + 1.99086852151718 NA promoter-TSS (NM_001081118) promoter-TSS (NM_001081118) 34 NM_001081118 101471 Mm.248656 NM_207211 ENSMUSG00000038611 Phrf1 AA673488 PHD and ring finger domains 1 protein-coding common_peak2_12_34_0.79952591650961_5.52904597519977_1.99054019639513 chr7 98059950 98060178 + 1.99054019639513 NA intron (NM_001256081, intron 39 of 48) (AATAG)n|Simple_repeat|Simple_repeat 49184 NM_001256082 17921 Mm.1403 NM_008663 ENSMUSG00000030761 Myo7a Hdb|Myo7|USH1B|nmf371|polka|sh-1|sh1 myosin VIIA protein-coding unique_peak1_12_34_0.79952591650961_5.52904597519977_1.99054019639513 chr13 54173558 54173953 + 1.99054019639513 NA Intergenic Intergenic -18374 NM_001010973 15466 Mm.57243 NM_008286 ENSMUSG00000034987 Hrh2 - histamine receptor H2 protein-coding unique_peak1_12_34_0.79952591650961_5.52904597519977_1.99054019639513-2 chr2 173351521 173351871 + 1.99054019639513 NA Intergenic B4A|SINE|B4 -75163 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding unique_peak2_7_61_-0.884555358448063_5.51191863116284_1.99054019639512-2 chr5 123075790 123076235 + 1.99054019639512 NA promoter-TSS (NM_001039723) promoter-TSS (NM_001039723) -263 NM_001039723 330189 Mm.391872 NM_001039723 ENSMUSG00000054434 Tmem120b - transmembrane protein 120B protein-coding unique_peak2_7_61_-0.884555358448063_5.51191863116284_1.99054019639512 chr2 117389284 117389900 + 1.99054019639512 NA Intergenic Intergenic -46715 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak2_51_410_-0.300961027854395_8.53251406975449_1.98978389368645 chr1 131138019 131139040 + 1.98978389368645 NA promoter-TSS (NM_145508) promoter-TSS (NM_145508) -295 NM_145508 226419 Mm.39299 NM_145508 ENSMUSG00000016526 Dyrk3 BC006704 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein-coding common_peak1_173_1623_-0.145925775332968_10.5923730295187_1.98952921184501 chr2 166994925 166996869 + 1.98952921184501 NA intron (NM_001291160, intron 1 of 11) CpG 402 NM_011490 20853 Mm.73276 NM_011490 ENSMUSG00000039536 Stau1 5830401L18Rik|AW549911|C85792|Stau staufen (RNA binding protein) homolog 1 (Drosophila) protein-coding common_peak2_117_1035_-0.184669571458373_9.92447350195737_1.98947853513799 chr11 67521295 67523499 + 1.98947853513799 NA Intergenic Intergenic -10601 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_106_924_-0.194339136047901_9.75613998737972_1.98932193486397 chr15 98952504 98954082 + 1.98932193486397 NA intron (NM_011653, intron 1 of 3) CpG 208 NM_011653 22142 Mm.405359 NM_011653 ENSMUSG00000072235 Tuba1a Tuba-1|Tuba1 tubulin, alpha 1A protein-coding common_peak1_106_924_-0.194339136047901_9.75613998737972_1.98932193486397 chr11 35769453 35770371 + 1.98932193486397 NA 5' UTR (NM_145962, exon 1 of 7) 5' UTR (NM_145962, exon 1 of 7) 417 NM_145962 211347 Mm.255044 NM_145962 ENSMUSG00000018846 Pank3 - pantothenate kinase 3 protein-coding unique_peak2_15_118_-0.598564500182776_6.59553551321656_1.98870966170213-2 chrX 13846081 13846774 + 1.98870966170213 NA 5' UTR (NM_001284505, exon 1 of 26) 5' UTR (NM_001284505, exon 1 of 26) 129 NM_001284505 12361 Mm.327591 NM_009806 ENSMUSG00000031012 Cask DXPri1|DXRib1|LIN-2|Pals3|mLin-2 calcium/calmodulin-dependent serine protein kinase (MAGUK family) protein-coding common_peak1_15_118_-0.598564500182776_6.59553551321656_1.98870966170213-2 chr12 21167365 21167839 + 1.98870966170213 NA intron (NM_001135192, intron 1 of 28) intron (NM_001135192, intron 1 of 28) 55846 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding unique_peak2_15_118_-0.598564500182776_6.59553551321656_1.98870966170213 chr2 45044256 45045113 + 1.98870966170213 NA intron (NM_001289521, intron 1 of 8) intron (NM_001289521, intron 1 of 8) -21507 NR_039591 100628598 NR_039591 ENSMUSG00000092679 Mir5129 mir-5129|mmu-mir-5129|mu-mir-5129 microRNA 5129 ncRNA common_peak1_15_118_-0.598564500182776_6.59553551321656_1.98870966170213 chr10 82698770 82699067 + 1.98870966170213 NA promoter-TSS (NM_001081218) promoter-TSS (NM_001081218) -89 NM_001081218 67933 Mm.127405 NM_026462 ENSMUSG00000020246 Hcfc2 1700129L13Rik|AU019838 host cell factor C2 protein-coding common_peak1_15_118_-0.598564500182776_6.59553551321656_1.98870966170213-3 chr8 108714464 108714947 + 1.98870966170213 NA promoter-TSS (NM_007496) promoter-TSS (NM_007496) 61 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak2_58_316_0.297187374902418_8.45693271759062_1.98840283961157 chrX 159532563 159533617 + 1.98840283961157 NA intron (NM_001033472, intron 1 of 11) CpG 422 NM_001033472 382252 Mm.296254 NM_001033472 ENSMUSG00000044150 A830080D01Rik 2310067E24Rik|Gm1146 RIKEN cDNA A830080D01 gene protein-coding common_peak1_44_217_0.357994312787706_7.94718148117078_1.98833126432517 chr11 107188644 107189330 + 1.98833126432517 NA intron (NM_001161329, intron 1 of 17) CpG 394 NM_133702 68979 Mm.294617 NM_133702 ENSMUSG00000018433 Nol11 1500002M01Rik|AU015220|AU019874 nucleolar protein 11 protein-coding common_peak2_132_1188_-0.171632687083296_10.129716656204_1.98808817020141 chr16 87439697 87441299 + 1.98808817020141 NA promoter-TSS (NM_016924) promoter-TSS (NM_016924) 94 NM_016924 53858 Mm.162406 NM_016924 ENSMUSG00000041079 Rwdd2b ORF5 RWD domain containing 2B protein-coding common_peak1_92_582_0.223464647687093_9.29908439704404_1.9878430467313 chr2 130178423 130179366 + 1.9878430467313 NA intron (NM_009225, intron 1 of 6) CpG 470 NM_009225 20638 Mm.88216 NM_009225 ENSMUSG00000027404 Snrpb AL024368|AU018828|SM-B|SM11|SMB|SNRNP-B small nuclear ribonucleoprotein B protein-coding common_peak1_18_62_0.623084279896974_6.2888220634484_1.98779951200269-3 chr6 128604914 128605291 + 1.98779951200269 NA Intergenic B1_Mur4|SINE|Alu 17832 NM_001159902 17057 Mm.16729 NM_010737 ENSMUSG00000030361 Klrb1a Ly55a|NKR-P1.7|NKR-P1A|NKRP12|Nkrp1-a|Nkrp1a|ly-55A killer cell lectin-like receptor subfamily B member 1A protein-coding common_peak1_18_62_0.623084279896974_6.2888220634484_1.98779951200269 chr11 50236862 50237387 + 1.98779951200269 NA intron (NR_132732, intron 3 of 4) CpG-1900 1408 NM_001313968 17001 Mm.245151 NM_008521 ENSMUSG00000020377 Ltc4s - leukotriene C4 synthase protein-coding common_peak1_18_62_0.623084279896974_6.2888220634484_1.98779951200269-4 chr8 120114021 120114532 + 1.98779951200269 NA 5' UTR (NM_001163762, exon 1 of 8) 5' UTR (NM_001163762, exon 1 of 8) 124 NM_001163761 234797 Mm.101958 NM_172286 ENSMUSG00000031824 6430548M08Rik AW049007|Kiaa0513|mKIAA0513 RIKEN cDNA 6430548M08 gene protein-coding common_peak1_18_62_0.623084279896974_6.2888220634484_1.98779951200269-2 chr6 52476713 52477143 + 1.98779951200269 NA Intergenic Intergenic -15523 NR_046049 74304 Mm.490579 NR_046049 ENSMUSG00000107895 1700094M24Rik - RIKEN cDNA 1700094M24 gene ncRNA common_peak1_158_1175_0.160203936760034_10.2797743132164_1.98752471265918 chr14 73237876 73239904 + 1.98752471265918 NA exon (NM_175116, exon 1 of 1) exon (NM_175116, exon 1 of 1) 999 NM_175116 67168 Mm.390681 NM_175116 ENSMUSG00000033446 Lpar6 2610302I02Rik|P2ry5|P2y5 lysophosphatidic acid receptor 6 protein-coding common_peak2_190_1490_0.142306963703351_10.6132180241351_1.98683257161724 chr10 111009062 111011276 + 1.98683257161724 NA promoter-TSS (NM_172554) promoter-TSS (NM_172554) -103 NM_172554 320150 Mm.339281 NM_172554 ENSMUSG00000035798 Zdhhc17 A230053P19Rik|BB187739|D130071N24Rik|Hip14 zinc finger, DHHC domain containing 17 protein-coding common_peak2_164_1525_-0.15011371229533_10.5004823906869_1.98654510915105 chr9 74974587 74977075 + 1.98654510915105 NA promoter-TSS (NM_153584) promoter-TSS (NM_153584) -280 NM_153584 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding common_peak1_103_895_-0.19870905504396_9.70800039453562_1.98612883723336 chr13 63815290 63816118 + 1.98612883723336 NA intron (NM_001013608, intron 1 of 18) intron (NM_001013608, intron 1 of 18) 370 NM_023507 76251 Mm.186610 NM_023507 ENSMUSG00000021470 Ercc6l2 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278 excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 protein-coding common_peak1_100_865_-0.201375021121267_9.65753570416609_1.98587206319939 chr12 113152120 113153358 + 1.98587206319939 NA intron (NM_007763, intron 1 of 4) intron (NM_007763, intron 1 of 4) 727 NM_007763 12925 Mm.272368 NM_007763 ENSMUSG00000006360 Crip1 CRHP|CRP1|Crip cysteine-rich protein 1 (intestinal) protein-coding common_peak1_67_383_0.271798382625727_8.72086169203402_1.98566118039423-2 chr3 107278790 107279781 + 1.98566118039423 NA intron (NM_026774, intron 1 of 3) CpG 427 NM_026774 68576 Mm.290035 NM_026774 ENSMUSG00000087260 Lamtor5 1110003H18Rik|Hbxip|XIP late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 protein-coding common_peak1_67_383_0.271798382625727_8.72086169203402_1.98566118039423 chr11 11656983 11658045 + 1.98566118039423 NA Intergenic Intergenic -28411 NM_009578 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_26_201_-0.4360039159122_7.44020952479569_1.98487449040792 chr7 142347895 142348471 + 1.98487449040792 NA intron (NM_177265, intron 3 of 3) B4A|SINE|B4 24076 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak2_235_1955_0.125060372462306_10.9962208411834_1.98455955571529 chr13 101766513 101769014 + 1.98455955571529 NA intron (NM_001077495, intron 1 of 15) CpG 454 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding unique_peak2_50_401_-0.303380914051472_8.49936123415319_1.98415119169925 chr7 104301725 104303819 + 1.98415119169925 NA intron (NM_023835, intron 4 of 7) RMER6C|LTR|ERVK -12259 NR_040749 622070 Mm.486406 NR_040749 ENSMUSG00000087175 Gm15133 OTTMUSG00000019186 predicted gene 15133 ncRNA common_peak2_316_2849_0.104168754319383_11.5288305810992_1.98348057634131 chr6 127580969 127584803 + 1.98348057634131 NA intron (NM_001033464, intron 1 of 6) intron (NM_001033464, intron 1 of 6) 4911 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak1_25_194_-0.451909069108678_7.38137577919527_1.98345090475223 chr14 52257915 52258426 + 1.98345090475223 NA Intergenic Intergenic -20598 NM_201637 67772 Mm.289934 NM_201637 ENSMUSG00000053754 Chd8 5830451P18Rik|AU015341|Duplin|HELSNF1|mKIAA1564 chromodomain helicase DNA binding protein 8 protein-coding common_peak1_61_498_-0.269601489416598_8.82809526062896_1.98344740409082 chr13 98944347 98945372 + 1.98344740409082 NA Intergenic Intergenic -18475 NM_178716 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak1_119_1055_-0.182513064388038_9.95313758716443_1.9833203910327 chr2 165954349 165955740 + 1.9833203910327 NA Intergenic Intergenic -37593 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak1_279_2433_0.112169195368875_11.3051980503982_1.982548725141 chr17 83984742 83987287 + 1.982548725141 NA Intergenic Intergenic -12538 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak2_41_324_-0.340208952930961_8.17419143145034_1.98252056073987 chr4 147847763 147849114 + 1.98252056073987 NA promoter-TSS (NM_198619) promoter-TSS (NM_198619) -63 NM_198619 242747 Mm.332053 NM_198619 ENSMUSG00000059423 Zfp933 2810408P10Rik zinc finger protein 933 protein-coding common_peak2_40_315_-0.342337483111677_8.13261200662126_1.98199477410673 chr7 122101249 122102457 + 1.98199477410673 NA promoter-TSS (NM_028177) promoter-TSS (NM_028177) -5 NM_028177 70316 Mm.3014 NM_028177 ENSMUSG00000030869 Ndufab1 2210401F17Rik|2310039H15Rik|2610003B19Rik|8kDa|9130423F15Rik|ACP|CI-SDAP|SDAP NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 protein-coding common_peak2_78_468_0.248654978597941_8.99777160181435_1.98121647513418 chr15 8168432 8169627 + 1.98121647513418 NA promoter-TSS (NM_001162906) promoter-TSS (NM_001162906) -77 NM_001162906 73692 Mm.164436 NM_001162906 ENSMUSG00000039801 2410089E03Rik 4732468D17Rik|Hug|Jbts17|b2b012Clo RIKEN cDNA 2410089E03 gene protein-coding common_peak2_108_944_-0.192428283578799_9.78795637731904_1.98069946628516 chr14 65069419 65072353 + 1.98069946628516 NA intron (NM_018788, intron 3 of 6) intron (NM_018788, intron 3 of 6) 27220 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak1_116_1024_-0.184330228631664_9.90924308007698_1.98025345580891 chr14 54039572 54041360 + 1.98025345580891 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 213463 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_55_444_-0.284484464649479_8.65541929352902_1.97887676100094 chr6 59425729 59427316 + 1.97887676100094 NA promoter-TSS (NM_183183) promoter-TSS (NM_183183) -232 NM_183183 243385 Mm.138080 NM_183183 ENSMUSG00000045441 Gprin3 C030038J10Rik|C730021L23 GPRIN family member 3 protein-coding common_peak1_55_444_-0.284484464649479_8.65541929352902_1.97887676100094 chr14 30479531 30480290 + 1.97887676100094 NA intron (NM_133761, intron 1 of 9) CpG 345 NM_133761 75901 Mm.28733 NM_133761 ENSMUSG00000021962 Dcp1a 1110066A22Rik|4930568L04Rik|AU019772|D14Ertd817e|Mitc1|SMIF decapping mRNA 1A protein-coding common_peak1_43_211_0.358489599317108_7.90716525422175_1.97839371350186 chr4 101258100 101259277 + 1.97839371350186 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 6594 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding unique_peak2_43_211_0.358489599317108_7.90716525422175_1.97839371350186 chr2 4569928 4571297 + 1.97839371350186 NA intron (NM_001177843, intron 13 of 23) intron (NM_001177843, intron 13 of 23) 10858 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294 FERM domain containing 4A protein-coding common_peak2_73_607_-0.241531551045819_9.12716173792068_1.9783420622751 chr5 73241029 73243083 + 1.9783420622751 NA intron (NM_028194, intron 1 of 62) intron (NM_028194, intron 1 of 62) 14562 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_131_1177_-0.171579253796869_10.116334196932_1.9783235632538 chr15 58033644 58035192 + 1.9783235632538 NA promoter-TSS (NM_029418) promoter-TSS (NM_029418) -124 NM_029418 75758 Mm.455792 NM_029418 ENSMUSG00000101892 9130401M01Rik AI849328 RIKEN cDNA 9130401M01 gene protein-coding common_peak1_69_570_-0.249288909652954_9.03270248053637_1.97822309301111 chr1 97770223 97771199 + 1.97822309301111 NA promoter-TSS (NM_173760) promoter-TSS (NM_173760) 539 NM_026250 252876 Mm.86090 NM_026250 ENSMUSG00000026333 Gin1 4930429M06Rik|8430411H10Rik|Gin-1|Zh2c2 gypsy retrotransposon integrase 1 protein-coding common_peak2_51_266_0.321337624139733_8.22136474375742_1.9781124227929 chr11 100814242 100815681 + 1.9781124227929 NA intron (NM_001113563, intron 1 of 18) intron (NM_001113563, intron 1 of 18) 7609 NM_011489 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding common_peak1_27_209_-0.427680767648197_7.50040513384202_1.97809402691015 chr2 57124311 57124936 + 1.97809402691015 NA promoter-TSS (NM_001139509) promoter-TSS (NM_001139509) -620 NM_001139509 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak2_27_209_-0.427680767648197_7.50040513384202_1.97809402691015 chr8 120113128 120114060 + 1.97809402691015 NA promoter-TSS (NM_001163762) promoter-TSS (NM_001163762) -558 NM_001163762 234797 Mm.101958 NM_172286 ENSMUSG00000031824 6430548M08Rik AW049007|Kiaa0513|mKIAA0513 RIKEN cDNA 6430548M08 gene protein-coding common_peak1_27_209_-0.427680767648197_7.50040513384202_1.97809402691015-2 chr2 173451906 173452402 + 1.97809402691015 NA Intergenic Charlie5|DNA|hAT-Charlie -70438 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding common_peak1_38_298_-0.351058224590244_8.04847256190298_1.97695663663382-3 chr7 135580333 135580849 + 1.97695663663382 NA intron (NM_001316678, intron 1 of 19) intron (NM_001316678, intron 1 of 19) -12890 NM_001316680 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_38_298_-0.351058224590244_8.04847256190298_1.97695663663382-2 chr7 27928934 27929678 + 1.97695663663382 NA 5' UTR (NM_028538, exon 1 of 4) 5' UTR (NM_028538, exon 1 of 4) 124 NM_028538 73430 Mm.379224 NM_028538 ENSMUSG00000070709 Zfp974 1700049G17Rik|AV321011|BB026409 zinc finger protein 974 protein-coding common_peak1_38_298_-0.351058224590244_8.04847256190298_1.97695663663382 chr11 75976472 75977192 + 1.97695663663382 NA Intergenic Intergenic -23080 NM_198637 74230 Mm.271247 NM_198637 ENSMUSG00000053783 1700016K19Rik Liat1 RIKEN cDNA 1700016K19 gene protein-coding common_peak2_38_298_-0.351058224590244_8.04847256190298_1.97695663663382 chr17 26123056 26124382 + 1.97695663663382 NA TTS (NM_021793) TTS (NM_021793) 216 NM_024227 68611 Mm.273102 NM_024227 ENSMUSG00000024181 Mrpl28 1110015G04Rik|L28mt|MAAT1|MRP-L28|p15 mitochondrial ribosomal protein L28 protein-coding common_peak1_356_3314_0.0964137313929765_11.7430000206964_1.9763352434979 chr6 144901956 144904301 + 1.9763352434979 NA Intergenic Intergenic 145684 NM_001024468 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding common_peak2_113_994_-0.18744168469448_9.86483187308377_1.97612341124656 chr17 17607533 17611159 + 1.97612341124656 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 15143 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_42_204_0.366247070748504_7.8626036348797_1.97599957623581 chr15 100494665 100495477 + 1.97599957623581 NA 5' UTR (NM_153407, exon 1 of 5) 5' UTR (NM_153407, exon 1 of 5) 168 NM_153407 207785 Mm.294969 NM_153407 ENSMUSG00000044636 Csrnp2 CSRNP-2|Csnrp2|taip-12 cysteine-serine-rich nuclear protein 2 protein-coding common_peak2_178_1677_-0.142982415017055_10.6410357929313_1.97591763928607 chr3 89772665 89774758 + 1.97591763928607 NA promoter-TSS (NR_130957) promoter-TSS (NR_130957) 102 NM_027315 70093 Mm.41438 NM_027315 ENSMUSG00000042572 Ube2q1 1110002C01Rik|2310012M18Rik|AI854014|Gtap|NICE-5|PRO3094|Ube2q ubiquitin-conjugating enzyme E2Q family member 1 protein-coding unique_peak2_24_94_0.516159583805436_6.82793540023367_1.9758364910545 chrX 168639497 168640330 + 1.9758364910545 NA Intergenic Intergenic 33989 NM_010832 17692 Mm.24248 NM_010832 ENSMUSG00000031358 Msl3 AU018931|Msl31|Msl3l1 male-specific lethal 3 homolog (Drosophila) protein-coding common_peak1_102_885_-0.199615004778279_9.69135538616588_1.97568678680385 chr6 112861075 112862208 + 1.97568678680385 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 85625 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak2_94_599_0.21965109977933_9.33864424038555_1.9756260062137 chr1 118310421 118311875 + 1.9756260062137 NA promoter-TSS (NM_011650) promoter-TSS (NM_011650) -16 NM_011650 22099 Mm.426637 NM_011650 ENSMUSG00000026374 Tsn 2610034C24Rik|AU040286|C3PO|TB-RBP translin protein-coding unique_peak2_9_74_-0.764296774051461_5.84667030347015_1.97555764737544 chr6 99282775 99283311 + 1.97555764737544 NA intron (NM_053202, intron 2 of 18) intron (NM_053202, intron 2 of 18) -16528 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_145_1323_-0.161756069235231_10.2898093721896_1.9754033781718 chr15 88732945 88734961 + 1.9754033781718 NA 5' UTR (NM_001033274, exon 1 of 13) 5' UTR (NM_001033274, exon 1 of 13) 266 NM_001033274 223770 Mm.254438 NM_001033274 ENSMUSG00000022387 Brd1 1110059H06Rik|AI316859|mKIAA4191 bromodomain containing 1 protein-coding common_peak1_70_406_0.26427456158077_8.80102226505663_1.97486125097719-2 chr8 23207387 23208872 + 1.97486125097719 NA intron (NM_018743, intron 1 of 12) CpG 324 NM_018743 102247 Mm.200898 NM_018743 ENSMUSG00000031545 Gpat4 AU041707|AW545732|Agpat6|Tsarg7 glycerol-3-phosphate acyltransferase 4 protein-coding common_peak1_70_406_0.26427456158077_8.80102226505663_1.97486125097719 chr3 85162133 85163378 + 1.97486125097719 NA Intergenic URR1B|DNA|hAT-Charlie -154764 NR_040542 73283 Mm.489084 NR_040542 ENSMUSG00000099995 1700036G14Rik - RIKEN cDNA 1700036G14 gene ncRNA common_peak2_60_489_-0.272118487955598_8.80057869502477_1.97486125097719 chr2 30981237 30982954 + 1.97486125097719 NA promoter-TSS (NM_028846) promoter-TSS (NM_028846) -154 NM_144885 227707 Mm.235238 NM_144885 ENSMUSG00000026851 BC005624 - cDNA sequence BC005624 protein-coding common_peak1_203_1622_0.136448114952197_10.7326713420241_1.97483000406412 chr9 118040452 118041502 + 1.97483000406412 NA intron (NM_013727, intron 1 of 7) CpG 455 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak1_56_301_0.306093980225095_8.39145172943763_1.97438624676926 chr5 105654096 105655072 + 1.97438624676926 NA Intergenic Intergenic -45385 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_28_217_-0.419521010264358_7.55842381964475_1.97300339656498 chr17 57193823 57194462 + 1.97300339656498 NA promoter-TSS (NM_019418) promoter-TSS (NM_019418) 39 NM_019418 50930 Mm.483369 NM_019418 ENSMUSG00000005824 Tnfsf14 HVEM-L|HVEML|LIGHT|LTg|Ly113|Tnlg1d tumor necrosis factor (ligand) superfamily, member 14 protein-coding common_peak1_37_290_-0.357898828325037_8.00592592874576_1.97221594791012 chr14 65344006 65344577 + 1.97221594791012 NA Intergenic Intergenic -14385 NM_199029 380912 Mm.270087 NM_199029 ENSMUSG00000034522 Zfp395 BC053701|Gm910 zinc finger protein 395 protein-coding common_peak2_35_273_-0.366734409901504_7.91466487800978_1.97143982961866 chr1 80669905 80671619 + 1.97143982961866 NA intron (NM_175291, intron 1 of 55) MTE2a|LTR|ERVL-MaLR -5410 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding unique_peak2_35_273_-0.366734409901504_7.91466487800978_1.97143982961866 chr6 108164208 108166072 + 1.97143982961866 NA intron (NM_145937, intron 3 of 8) intron (NM_145937, intron 3 of 8) 20443 NM_145937 58911 Mm.439876 NM_145937 ENSMUSG00000030101 Sumf1 AA543204|AI463102|AI851573|FGE sulfatase modifying factor 1 protein-coding common_peak1_35_273_-0.366734409901504_7.91466487800978_1.97143982961866 chr2 128395053 128395794 + 1.97143982961866 NA intron (NR_028591, intron 1 of 1) intron (NR_028591, intron 1 of 1) 33928 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_50_259_0.325302964099002_8.18501929507796_1.97097232020961 chr8 13650823 13651817 + 1.97097232020961 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 26267 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_131_923_0.178795528617533_9.94114680572482_1.97058844869778 chr17 35909202 35911342 + 1.97058844869778 NA promoter-TSS (NM_028476) promoter-TSS (NM_028476) -204 NM_001142744 73242 Mm.273155 NM_028476 ENSMUSG00000024426 Atat1 0610011P08Rik|2610008K08Rik|2610110G12Rik|3110080J08Rik|Mec17|TAT alpha tubulin acetyltransferase 1 protein-coding common_peak2_107_934_-0.193390365562692_9.77212737199365_1.9700207912357 chr2 13543545 13545360 + 1.9700207912357 NA intron (NM_010067, intron 1 of 10) intron (NM_010067, intron 1 of 10) 212 NM_010067 13434 Mm.6979 NM_010067 ENSMUSG00000026723 Trdmt1 Dnmt2|Rnmt2 tRNA aspartic acid methyltransferase 1 protein-coding unique_peak2_11_88_-0.688570274060658_6.13144829393607_1.96968908950776 chr12 75818371 75818895 + 1.96968908950776 NA intron (NM_001005510, intron 1 of 115) CpG 315 NM_001005510 319565 Mm.26652 NM_001005510 ENSMUSG00000063450 Syne2 6820443O06Rik|AW546258|Cpfl8|D12Ertd777e|NUA|Nesp2g|dice|mKIAA1011 spectrin repeat containing, nuclear envelope 2 protein-coding common_peak1_29_225_-0.411522529817485_7.61441769750645_1.96940871984791 chr11 58928614 58929083 + 1.96940871984791 NA Intergenic Intergenic 10058 NM_022423 108660 Mm.249986 NM_022423 ENSMUSG00000020496 Rnf187 2410016F01Rik|AB030190|RACO-1 ring finger protein 187 protein-coding common_peak1_29_225_-0.411522529817485_7.61441769750645_1.96940871984791-2 chr8 84856827 84857502 + 1.96940871984791 NA exon (NM_025648, exon 1 of 13) exon (NM_025648, exon 1 of 13) 178 NM_025648 66590 Mm.292517 NM_025648 ENSMUSG00000003808 Farsa 0610012A19Rik|Farsla phenylalanyl-tRNA synthetase, alpha subunit protein-coding common_peak2_163_1224_0.156101853548206_10.336616960664_1.96933472200593 chr14 73237506 73239937 + 1.96933472200593 NA exon (NM_175116, exon 1 of 1) exon (NM_175116, exon 1 of 1) 830 NM_175116 67168 Mm.390681 NM_175116 ENSMUSG00000033446 Lpar6 2610302I02Rik|P2ry5|P2y5 lysophosphatidic acid receptor 6 protein-coding unique_peak2_64_525_-0.262004468959406_8.9079167548126_1.96924380783185 chr11 67511535 67514016 + 1.96924380783185 NA Intergenic (CAAA)n|Simple_repeat|Simple_repeat -20223 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding unique_peak2_13_103_-0.640487279309522_6.38019607848633_1.9690585498223 chr2 35994601 35995324 + 1.9690585498223 NA Intergenic Intergenic -15338 NM_029774 74410 Mm.21591 NM_028921 ENSMUSG00000026885 Ttll11 4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e tubulin tyrosine ligase-like family, member 11 protein-coding unique_peak2_13_103_-0.640487279309522_6.38019607848633_1.9690585498223-2 chr2 122137865 122138784 + 1.9690585498223 NA intron (NM_026251, intron 2 of 17) intron (NM_026251, intron 2 of 17) -9363 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding unique_peak2_13_103_-0.640487279309522_6.38019607848633_1.9690585498223-3 chr6 130185570 130186612 + 1.9690585498223 NA intron (NM_010651, intron 4 of 7) B1F|SINE|Alu 7021 NM_010651 16640 Mm.457996 NM_010651 ENSMUSG00000033024 Klra9 LY49I1|Ly49I killer cell lectin-like receptor subfamily A, member 9 protein-coding common_peak1_13_103_-0.640487279309522_6.38019607848633_1.9690585498223 chr15 82244732 82245101 + 1.9690585498223 NA promoter-TSS (NM_001080158) promoter-TSS (NM_001080158) -169 NM_025639 66570 Mm.23596 NM_025639 ENSMUSG00000068101 Cenpm 2610019I03Rik|AI853711|Pane1 centromere protein M protein-coding unique_peak2_13_103_-0.640487279309522_6.38019607848633_1.9690585498223-4 chr6 145306231 145307057 + 1.9690585498223 NA Intergenic Intergenic 56092 NR_045598 100039495 Mm.121014 NR_045598 ENSMUSG00000086013 Gm15706 OTTMUSG00000025463 predicted gene 15706 ncRNA common_peak2_19_67_0.603671386380437_6.38929853444056_1.96905854982228 chr13 52892030 52892623 + 1.96905854982228 NA intron (NM_016709, intron 4 of 9) intron (NM_016709, intron 4 of 9) 37351 NM_016709 11992 Mm.252034 NM_016709 ENSMUSG00000021460 Auh C77140|W91705 AU RNA binding protein/enoyl-coenzyme A hydratase protein-coding common_peak1_19_67_0.603671386380437_6.38929853444056_1.96905854982228 chr12 85270260 85270603 + 1.96905854982228 NA intron (NM_001304475, intron 1 of 11) CpG 160 NM_001304475 217716 Mm.311981 NM_145446 ENSMUSG00000021245 Mlh3 AV125803|BB126472 mutL homolog 3 protein-coding common_peak1_19_67_0.603671386380437_6.38929853444056_1.96905854982228-2 chr13 24597339 24597782 + 1.96905854982228 NA TTS (NR_024599) TTS (NR_024599) 7207 NR_024599 76024 Mm.440710 NR_024599 Gm11346 5830431A10Rik|AI447617|Gm11347|OTTMUSG00000000601|OTTMUSG00000000602 X-linked lymphocyte-regulated 5 pseudogene pseudo common_peak1_19_67_0.603671386380437_6.38929853444056_1.96905854982228-3 chr17 72977964 72978416 + 1.96905854982228 NA Intergenic Intergenic 59885 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_138_987_0.173617549207924_10.0351760061886_1.96904705892309 chr2 167377078 167379568 + 1.96904705892309 NA Intergenic Intergenic -29145 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak2_160_1481_-0.151332818946855_10.4576633228324_1.96869240767523 chr5 105717412 105719655 + 1.96869240767523 NA intron (NM_178701, intron 1 of 2) intron (NM_178701, intron 1 of 2) 17723 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_20_155_-0.507927575063751_7.03143843133037_1.96843083716487 chr9 118054500 118054933 + 1.96843083716487 NA intron (NM_013727, intron 5 of 7) B1F|SINE|Alu 14194 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding unique_peak2_20_155_-0.507927575063751_7.03143843133037_1.96843083716487 chr6 99066428 99067518 + 1.96843083716487 NA intron (NM_001197321, intron 4 of 17) B3|SINE|B2 -38675 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_173_1622_-0.145037142695763_10.5919287132001_1.96834326361342 chr5 143731363 143733248 + 1.96834326361342 NA promoter-TSS (NM_029749) promoter-TSS (NM_029749) -25 NM_029749 76800 Mm.259620 NM_029749 ENSMUSG00000051306 Usp42 2410140K03Rik|3110031A07Rik|A630018G05Rik|D5Ertd591e ubiquitin specific peptidase 42 protein-coding common_peak1_104_904_-0.196193751293748_9.72367710632369_1.96819616462418 chr2 13543648 13545115 + 1.96819616462418 NA intron (NM_010067, intron 1 of 10) intron (NM_010067, intron 1 of 10) 283 NM_010067 13434 Mm.6979 NM_010067 ENSMUSG00000026723 Trdmt1 Dnmt2|Rnmt2 tRNA aspartic acid methyltransferase 1 protein-coding common_peak2_68_561_-0.251830999974132_9.00851082023386_1.96817190678426 chr18 10029181 10030665 + 1.96817190678426 NA exon (NM_021522, exon 1 of 16) exon (NM_021522, exon 1 of 16) 226 NM_021522 59025 Mm.329277 NM_021522 ENSMUSG00000047879 Usp14 2610005K12Rik|2610037B11Rik|AW107924|C78769|ax|nmf375 ubiquitin specific peptidase 14 protein-coding common_peak2_36_282_-0.364874591620472_7.96222094702165_1.96806013912817 chr1 173766394 173768226 + 1.96806013912817 NA promoter-TSS (NM_008329) promoter-TSS (NM_008329) -391 NM_008329 15951 Mm.261270 NM_008329 ENSMUSG00000073489 Ifi204 Ifi16|p204 interferon activated gene 204 protein-coding common_peak2_72_598_-0.244093166403157_9.10436560958721_1.9677577286362 chr5 134268683 134271172 + 1.9677577286362 NA intron (NM_001080749, intron 10 of 32) intron (NM_001080749, intron 10 of 32) -40302 NR_104383 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak2_113_762_0.195571783902_9.67332513878553_1.96730547262342 chr5 30665796 30667946 + 1.96730547262342 NA promoter-TSS (NM_001302130) promoter-TSS (NM_001302130) -15 NM_001302130 12615 Mm.290563 NM_007681 ENSMUSG00000029177 Cenpa Cenp-A centromere protein A protein-coding unique_peak2_33_257_-0.381078683262727_7.82068791379189_1.96701291171512 chr13 30819617 30821344 + 1.96701291171512 NA intron (NM_025588, intron 26 of 27) intron (NM_025588, intron 26 of 27) 71222 NM_013674 16364 Mm.4677 NM_013674 ENSMUSG00000021356 Irf4 AI385587|IRF-4|LSIRF|NF-EM5|Spip interferon regulatory factor 4 protein-coding common_peak2_33_257_-0.381078683262727_7.82068791379189_1.96701291171512 chr3 51408370 51409190 + 1.96701291171512 NA intron (NM_025523, intron 1 of 3) CpG 175 NM_025523 66377 Mm.331007 NM_025523 ENSMUSG00000037152 Ndufc1 2310016K22Rik|KFYI NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 protein-coding common_peak1_133_941_0.177572761723296_9.96836963047443_1.96652628186843 chr9 21592168 21593778 + 1.96652628186843 NA promoter-TSS (NM_138303) promoter-TSS (NM_138303) -142 NM_001205157 74766 Mm.475712 NM_138303 ENSMUSG00000032182 Yipf2 1300010K09Rik Yip1 domain family, member 2 protein-coding common_peak2_65_368_0.276455252786841_8.66570463245382_1.96648545055784 chr14 8097719 8098996 + 1.96648545055784 NA exon (NM_178279, exon 1 of 19) exon (NM_178279, exon 1 of 19) 144 NM_178279 218699 Mm.29515 NM_145458 ENSMUSG00000033885 Pxk C230080L11Rik|D14Ertd813e|MONaKA PX domain containing serine/threonine kinase protein-coding common_peak1_59_480_-0.274624339985982_8.77258091377705_1.96643784869112 chr4 126967645 126968460 + 1.96643784869112 NA promoter-TSS (NM_001114399) promoter-TSS (NM_001114399) -129 NM_001114399 67785 Mm.165401 NM_001114399 ENSMUSG00000042446 Zmym4 6330503C17Rik|AI480785|AW493829|CDIR|D630001M21|MYM|Zfp262|Znf262|mKIAA0425 zinc finger, MYM-type 4 protein-coding common_peak2_102_667_0.207843591302687_9.4876260881254_1.96619836288412 chr15 80696869 80698944 + 1.96619836288412 NA promoter-TSS (NR_045309) promoter-TSS (NR_045309) -296 NR_045310 106059 Mm.442457 NR_045309 A430088P11Rik - RIKEN cDNA A430088P11 gene ncRNA common_peak1_31_241_-0.395997662963071_7.72086440579306_1.9660695757716 chr2 26497718 26498326 + 1.9660695757716 NA intron (NM_008714, intron 2 of 33) intron (NM_008714, intron 2 of 33) 5800 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak1_40_191_0.37648076434427_7.77320288289329_1.96606100504755 chr6 41531105 41531989 + 1.96606100504755 NA Intergenic Intergenic 9771 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding unique_peak2_32_249_-0.388464337001207_7.77155211616148_1.96606100504755 chr6 72413591 72414902 + 1.96606100504755 NA promoter-TSS (NM_019802) promoter-TSS (NM_019802) -62 NM_019802 56316 Mm.19937 NM_019802 ENSMUSG00000053460 Ggcx - gamma-glutamyl carboxylase protein-coding common_peak1_32_249_-0.388464337001207_7.77155211616148_1.96606100504755 chr6 41537926 41538512 + 1.96606100504755 NA Intergenic Intergenic 16443 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding unique_peak2_16_125_-0.573743662525745_6.69040809223704_1.96563750269898-2 chr7 7209428 7210128 + 1.96563750269898 NA exon (NM_145577, exon 1 of 5) exon (NM_145577, exon 1 of 5) 220 NM_145577 232855 Mm.360403 NM_145577 ENSMUSG00000066838 Zfp772 - zinc finger protein 772 protein-coding unique_peak2_16_125_-0.573743662525745_6.69040809223704_1.96563750269898 chr15 81925540 81926395 + 1.96563750269898 NA 5' UTR (NM_030229, exon 1 of 6) 5' UTR (NM_030229, exon 1 of 6) 246 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding unique_peak2_16_125_-0.573743662525745_6.69040809223704_1.96563750269898-3 chr9 117927153 117927857 + 1.96563750269898 NA Intergenic Intergenic -113017 NM_001286508 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_137_1239_-0.166916773841088_10.1926660183537_1.9653740261783 chr12 115256554 115259559 + 1.9653740261783 NA Intergenic Intergenic 437738 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA common_peak2_55_294_0.308605916955077_8.35887410272674_1.96531958856266 chrX 103164943 103165555 + 1.96531958856266 NA Intergenic (CCG)n|Simple_repeat|Simple_repeat 21415 NM_008671 17954 Mm.388694 NM_008671 ENSMUSG00000082229 Nap1l2 Bpx nucleosome assembly protein 1-like 2 protein-coding common_peak2_79_663_-0.230680581343437_9.25969914067521_1.96519998417124 chr19 5874477 5875893 + 1.96519998417124 NA promoter-TSS (NM_026169) promoter-TSS (NM_026169) 23 NM_026169 67457 Mm.202092 NM_026169 ENSMUSG00000024816 Frmd8 1200004M23Rik|2310035N23Rik|4931429L16Rik|AU018809 FERM domain containing 8 protein-coding common_peak2_79_663_-0.230680581343437_9.25969914067521_1.96519998417124-2 chr3 146681443 146683647 + 1.96519998417124 NA Intergenic Intergenic -31228 NM_029144 75015 Mm.250432 NM_029144 ENSMUSG00000048652 4930503B20Rik 1700013A07Rik|1700095G21Rik|4930483N21Rik|Gm1652|Samd13 RIKEN cDNA 4930503B20 gene protein-coding common_peak2_555_5801_0.0728748229673162_12.5387719916817_1.9649095280501 chr19 53888568 53895990 + 1.9649095280501 NA promoter-TSS (NM_011050) promoter-TSS (NM_011050) 48 NM_011050 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak2_96_616_0.216211684213992_9.37723252125641_1.96437835417539 chr5 4103721 4105279 + 1.96437835417539 NA 5' UTR (NM_020010, exon 1 of 10) 5' UTR (NM_020010, exon 1 of 10) 197 NM_020010 13121 Mm.140158 NM_020010 ENSMUSG00000001467 Cyp51 AI426508|CYPLI|Cyp51a1|Ldm|P450-14DM|P450LI cytochrome P450, family 51 protein-coding common_peak1_49_252_0.32963392862843_8.14781053900852_1.96422022281182-2 chr7 116442884 116443526 + 1.96422022281182 NA intron (NM_011083, intron 1 of 32) CpG 253 NM_011083 18704 Mm.3810 NM_011083 ENSMUSG00000030660 Pik3c2a Cpk-m|PI3KC2 phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide protein-coding common_peak1_49_252_0.32963392862843_8.14781053900852_1.96422022281182 chr15 98088635 98089521 + 1.96422022281182 NA intron (NM_144851, intron 1 of 17) ORR1A2-int|LTR|ERVL-MaLR -3511 NM_001163488 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding common_peak2_80_485_0.241529579387098_9.04557729329933_1.96236213746314 chr14 19968127 19969578 + 1.96236213746314 NA intron (NM_001285908, intron 1 of 3) B1F|SINE|Alu 7841 NM_001285911 14702 Mm.41737 NM_010315 ENSMUSG00000043004 Gng2 - guanine nucleotide binding protein (G protein), gamma 2 protein-coding common_peak1_25_100_0.497209761889137_6.90681636369636_1.96204781512535-2 chr8 84969122 84969719 + 1.96204781512535 NA promoter-TSS (NM_011563) promoter-TSS (NM_011563) -228 NM_011563 21672 Mm.347009 NM_011563 ENSMUSG00000005161 Prdx2 AL022839|Band-8|NkefB|PRP|PrxII|TDX1|TPx|TPx-B|TR|TSA|Tdpx1|Torin peroxiredoxin 2 protein-coding common_peak2_25_100_0.497209761889137_6.90681636369636_1.96204781512535 chr4 59242215 59243049 + 1.96204781512535 NA Intergenic Intergenic -17419 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_25_100_0.497209761889137_6.90681636369636_1.96204781512535 chr19 5040855 5041358 + 1.96204781512535 NA promoter-TSS (NM_134155) promoter-TSS (NM_134155) -298 NM_134155 107392 Mm.29628 NM_134155 ENSMUSG00000080268 Brms1 AV003220|AW554636 breast cancer metastasis-suppressor 1 protein-coding unique_peak2_25_100_0.497209761889137_6.90681636369636_1.96204781512535 chr5 105686471 105687171 + 1.96204781512535 NA Intergenic Intergenic -13148 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_21_162_-0.488930411537126_7.10426294846251_1.96147463125426-2 chr6 146081432 146081857 + 1.96147463125426 NA Intergenic Tigger17a|DNA|TcMar-Tigger 147497 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_21_162_-0.488930411537126_7.10426294846251_1.96147463125426 chr14 99099883 99100315 + 1.96147463125426 NA promoter-TSS (NM_028315) promoter-TSS (NM_028315) -329 NM_028315 72662 Mm.163339 NM_028315 ENSMUSG00000033166 Dis3 2810028N01Rik DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease protein-coding common_peak1_15_48_0.68154341900996_5.95548155362019_1.96088648955617-3 chr8 34144792 34145201 + 1.96088648955617 NA intron (NM_026609, intron 1 of 3) intron (NM_026609, intron 1 of 3) 1743 NM_026609 68192 Mm.34212 NM_026609 ENSMUSG00000031513 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 protein-coding common_peak1_15_48_0.68154341900996_5.95548155362019_1.96088648955617 chr10 117417119 117417466 + 1.96088648955617 NA Intergenic B1_Mus2|SINE|Alu -40319 NM_001310609 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding common_peak1_15_48_0.68154341900996_5.95548155362019_1.96088648955617-2 chr6 99811592 99812020 + 1.96088648955617 NA Intergenic RMER20B|LTR|ERVK -85414 NM_001170419 50501 Mm.87365 NM_015768 ENSMUSG00000030069 Prok2 Bv8|PK2|Prok1 prokineticin 2 protein-coding unique_peak1_15_48_0.68154341900996_5.95548155362019_1.96088648955617 chr5 31256291 31256689 + 1.96088648955617 NA intron (NM_026298, intron 40 of 47) intron (NM_026298, intron 40 of 47) 4784 NM_027221 69815 Mm.389609 NM_027221 ENSMUSG00000029149 Krtcap3 2010001C09Rik|AW321088|Kcp3 keratinocyte associated protein 3 protein-coding common_peak1_142_1025_0.169375330975374_10.0875026810947_1.96035124540429 chr12 65073148 65074309 + 1.96035124540429 NA intron (NM_013902, intron 1 of 6) CpG 210 NM_013902 30795 Mm.28480 NM_013902 ENSMUSG00000020949 Fkbp3 25kDa|FKBP-3|FKBP25 FK506 binding protein 3 protein-coding common_peak1_71_588_-0.244213839585081_9.08001690403792_1.96030229408405 chr10 67284624 67285376 + 1.96030229408405 NA intron (NM_001036293, intron 1 of 3) CpG 281 NM_001036293 641340 Mm.136223 NM_001036293 ENSMUSG00000075000 Nrbf2 NRBF-2 nuclear receptor binding factor 2 protein-coding common_peak1_46_366_-0.316505165417196_8.36138367013461_1.96026437745983 chr10 128376308 128376961 + 1.96026437745983 NA promoter-TSS (NM_172790) promoter-TSS (NM_172790) -490 NM_172790 237615 Mm.440177 NM_172790 ENSMUSG00000014498 Ankrd52 6430544C07|G431002C21Rik ankyrin repeat domain 52 protein-coding common_peak2_157_1449_-0.153125782602624_10.425274293601_1.96017782075478 chr13 14063659 14065637 + 1.96017782075478 NA intron (NM_198122, intron 1 of 22) CpG 864 NM_198122 94246 Mm.439784 NM_194262 ENSMUSG00000039219 Arid4b BCAA|BRCAA1|RBBP1L1|Rbp1l1|SAP180 AT rich interactive domain 4B (RBP1-like) protein-coding common_peak2_107_710_0.201726439592891_9.57456896941586_1.96000808569511 chr4 125084364 125086010 + 1.96000808569511 NA promoter-TSS (NM_027310) promoter-TSS (NM_027310) 53 NM_001290701 70088 Mm.291214 NM_027310 ENSMUSG00000028863 Meaf6 2310005N01Rik|2810036M01Rik MYST/Esa1-associated factor 6 protein-coding common_peak1_38_178_0.389127672343604_7.67837961343606_1.95900624852924 chr17 88530075 88530697 + 1.95900624852924 NA intron (NM_028658, intron 1 of 21) intron (NM_028658, intron 1 of 21) 262 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding unique_peak2_38_178_0.389127672343604_7.67837961343606_1.95900624852924 chr2 32381249 32382426 + 1.95900624852924 NA promoter-TSS (NM_198001) promoter-TSS (NM_198001) 78 NM_198001 73737 Mm.27608 NM_198001 ENSMUSG00000039195 1110008P14Rik C79326 RIKEN cDNA 1110008P14 gene protein-coding common_peak2_39_185_0.378587727709101_7.72845267496258_1.95822383032058 chr1 34463735 34464924 + 1.95822383032058 NA intron (NM_011206, intron 5 of 14) intron (NM_011206, intron 5 of 14) 4583 NM_011206 19253 Mm.361 NM_011206 ENSMUSG00000026126 Ptpn18 FLP1|HSCF|PTP-HSCF|PTP-K1|Ptpk1 protein tyrosine phosphatase, non-receptor type 18 protein-coding common_peak1_103_894_-0.197098005137974_9.70719486958263_1.9576629450074 chr4 117155065 117156549 + 1.9576629450074 NA promoter-TSS (NR_030704) promoter-TSS (NR_030704) 41 NR_030704 100216533 NR_030704 ENSMUSG00000092680 Snord55 - small nucleolar RNA, C/D box 55 snoRNA common_peak2_86_533_0.232101898978298_9.1767468811767_1.95690797467887 chr6 103343556 103345524 + 1.95690797467887 NA Intergenic Intergenic -166336 NM_007697 12661 Mm.251288 NM_007697 ENSMUSG00000030077 Chl1 A530023M13Rik|AI465420|CALL|LICAM2 cell adhesion molecule L1-like protein-coding common_peak2_144_1044_0.167481674422644_10.1130280641796_1.95652701859695 chr5 34537267 34540410 + 1.95652701859695 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) -4527 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak2_45_357_-0.318742661984391_8.32444444627206_1.95650613825765 chr7 6361971 6363783 + 1.95650613825765 NA promoter-TSS (NM_001025163) promoter-TSS (NM_001025163) -431 NM_001025163 330463 Mm.136456 NM_177888 ENSMUSG00000055150 Zfp78 A330079D15|KRAB12|Zfp77 zinc finger protein 78 protein-coding common_peak2_54_287_0.311366016943603_8.32560800991411_1.95650613825765 chr2 166118754 166120431 + 1.95650613825765 NA intron (NM_001252579, intron 2 of 20) intron (NM_001252579, intron 2 of 20) 35693 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak2_338_3555_-0.0963855945040848_11.7478468115777_1.95624310988059 chr2 22772755 22777799 + 1.95624310988059 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 950 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak2_111_973_-0.187988589691704_9.83378366723649_1.95620586791391 chr2 130629034 130630525 + 1.95620586791391 NA intron (NM_198176, intron 1 of 2) CpG 248 NM_198176 380601 Mm.27090 NM_198176 ENSMUSG00000079043 Fastkd5 C78212|mKIAA1792 FAST kinase domains 5 protein-coding unique_peak2_27_111_0.479209827960322_7.04695983603776_1.95582004222037 chr14 55635165 55636176 + 1.95582004222037 NA promoter-TSS (NM_024267) promoter-TSS (NM_024267) 8 NM_024267 75751 Mm.27546 NM_024267 ENSMUSG00000002319 Ipo4 8430408O15Rik|AA409693|Imp4a|RanBP4 importin 4 protein-coding common_peak1_27_111_0.479209827960322_7.04695983603776_1.95582004222037 chr1 39841833 39842304 + 1.95582004222037 NA TTS (NR_040465) TTS (NR_040465) 5262 NR_040465 73426 Mm.396239 NR_040465 ENSMUSG00000101634 1700066B17Rik - RIKEN cDNA 1700066B17 gene ncRNA common_peak1_27_111_0.479209827960322_7.04695983603776_1.95582004222037-2 chr5 139150273 139150868 + 1.95582004222037 NA exon (NM_001081265, exon 1 of 13) exon (NM_001081265, exon 1 of 13) 347 NM_001081265 433956 Mm.5547 NM_001081265 ENSMUSG00000025857 Dnaaf5 BC053401|C76907|Heatr2 dynein, axonemal assembly factor 5 protein-coding common_peak2_161_1492_-0.151044055955307_10.4684764221569_1.95574859661209 chr5 110769774 110771715 + 1.95574859661209 NA promoter-TSS (NM_029337) promoter-TSS (NM_029337) -27 NM_173066 75560 Mm.270487 NM_029337 ENSMUSG00000029505 Ep400 1700020J09Rik|AU023439|mDomino|mKIAA1498|p400 E1A binding protein p400 protein-coding common_peak1_260_2226_0.116046504031347_11.1789090948035_1.9555458068234 chr10 75326891 75328930 + 1.9555458068234 NA intron (NM_009630, intron 2 of 2) intron (NM_009630, intron 2 of 2) 11033 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak2_97_835_-0.203870583983843_9.60542384008896_1.95511520378058 chr11 116488860 116490926 + 1.95511520378058 NA intron (NM_026364, intron 1 of 9) CpG 453 NM_026364 67763 Mm.25125 NM_026364 ENSMUSG00000015869 Prpsap1 5730409F23Rik|PAP39 phosphoribosyl pyrophosphate synthetase-associated protein 1 protein-coding common_peak2_64_361_0.277068633249691_8.63838020370805_1.95506120752789 chr15 99456983 99458675 + 1.95506120752789 NA promoter-TSS (NM_001001884) promoter-TSS (NM_001001884) -81 NM_001001884 380969 Mm.22915 NM_001001884 ENSMUSG00000023009 Nckap5l C230021P08Rik|Cep169 NCK-associated protein 5-like protein-coding common_peak1_72_422_0.257805173265679_8.85341643975279_1.95435986749902 chr17 30612003 30612799 + 1.95435986749902 NA intron (NM_001113560, intron 1 of 6) CpG 258 NM_025374 109801 Mm.261984 NM_025374 ENSMUSG00000024026 Glo1 0610009E22Rik|1110008E19Rik|2510049H23Rik|AW550643|GLY1|Glo-1|Glo-1r|Glo-1s|Glo1-r|Glo1-s|Qglo glyoxalase 1 protein-coding common_peak2_68_391_0.267885476131587_8.748652582181_1.95433504852739 chr19 9937955 9939780 + 1.95433504852739 NA Intergenic Intergenic -39334 NM_016692 16319 Mm.29755 NM_016692 ENSMUSG00000024660 Incenp 2700067E22Rik|AU019509|C130081E20|C77457 inner centromere protein protein-coding common_peak2_184_1741_-0.138639670509134_10.6972090733443_1.95369206693092 chr14 57888294 57890932 + 1.95369206693092 NA intron (NM_029492, intron 1 of 12) intron (NM_029492, intron 1 of 12) 649 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|ENSMUSG00000055956|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak2_81_681_-0.225572352772391_9.30084175263798_1.95259368384063 chr4 75277374 75279961 + 1.95259368384063 NA promoter-TSS (NM_025849) promoter-TSS (NM_025849) -381 NM_025849 66928 Mm.24332 NM_025849 ENSMUSG00000028398 Tmem261 1700027K24Rik|3110001D03Rik transmembrane protein 261 protein-coding unique_peak2_37_172_0.392348286946522_7.63080237110999_1.95257533751723 chr9 108661750 108662882 + 1.95257533751723 NA exon (NM_020520, exon 1 of 9) exon (NM_020520, exon 1 of 9) 218 NM_020520 57279 Mm.29666 NM_020520 ENSMUSG00000032602 Slc25a20 1110007P09Rik|C78826|Cact|mCAC solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20 protein-coding common_peak2_37_172_0.392348286946522_7.63080237110999_1.95257533751723 chr3 31056336 31057543 + 1.95257533751723 NA Intergenic Lx8|LINE|L1 17973 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA common_peak2_256_2182_0.117505234165884_11.1508490320737_1.95257278397442 chr12 111537264 111539493 + 1.95257278397442 NA 5' UTR (NM_178041, exon 2 of 12) 5' UTR (NM_178041, exon 2 of 12) 277 NM_173363 217869 Mm.271222 NM_173363 ENSMUSG00000021282 Eif5 2810011H21Rik|D12Ertd549e eukaryotic translation initiation factor 5 protein-coding common_peak2_47_238_0.339520971297703_8.0706272936296_1.95200990232012 chr19 41801170 41802040 + 1.95200990232012 NA intron (NM_001163495, intron 1 of 10) CpG 479 NM_001163495 71085 Mm.21646 NM_027667 ENSMUSG00000025154 Arhgap19 4933411B03Rik|AI120128|AW546831|mFLJ00368 Rho GTPase activating protein 19 protein-coding common_peak2_265_2280_0.115061892536579_11.2129816775804_1.95178939386836 chr17 28216026 28219922 + 1.95178939386836 NA intron (NM_027185, intron 3 of 10) intron (NM_027185, intron 3 of 10) 10196 NM_027185 23853 Mm.204731 NM_027185 ENSMUSG00000002257 Def6 2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6 differentially expressed in FDCP 6 protein-coding common_peak1_126_1125_-0.174780417906184_10.0496009031271_1.95174113398082 chr4 129741244 129742504 + 1.95174113398082 NA exon (NM_011317, exon 1 of 9) exon (NM_011317, exon 1 of 9) 429 NM_011317 20218 Mm.8256 NM_011317 ENSMUSG00000028790 Khdrbs1 Sam68|p62|p68 KH domain containing, RNA binding, signal transduction associated 1 protein-coding common_peak2_66_542_-0.254264687654638_8.95767604397704_1.95166161872445 chr7 45770134 45772235 + 1.95166161872445 NA Intergenic Intergenic -11629 NM_017465 54200 Mm.271634 NM_017465 ENSMUSG00000003271 Sult2b1 AI326997|BB173635|ST2B1|SULT2B sulfotransferase family, cytosolic, 2B, member 1 protein-coding common_peak1_157_1167_0.158886843419655_10.2692679805898_1.95126357802614 chr14 27401204 27403090 + 1.95126357802614 NA 3' UTR (NM_027871, exon 11 of 11) 3' UTR (NM_027871, exon 11 of 11) -26700 NM_028945 218850 Mm.247767 NM_028945 ENSMUSG00000040651 Fam208a 4732418E12|4933409E02Rik|D14Abb1e|MommeD6 family with sequence similarity 208, member A protein-coding common_peak2_275_2787_-0.109194903248918_11.390417394244_1.95080014284516 chr11 97798636 97802182 + 1.95080014284516 NA intron (NM_010688, intron 1 of 6) intron (NM_010688, intron 1 of 6) 737 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak1_35_159_0.409369578171661_7.52661288397319_1.95078320366615 chr8 95488096 95488766 + 1.95078320366615 NA exon (NM_009974, exon 1 of 12) exon (NM_009974, exon 1 of 12) 389 NM_009974 13000 Mm.51136 NM_009974 ENSMUSG00000046707 Csnk2a2 1110035J23Rik|C77789|CK2 casein kinase 2, alpha prime polypeptide protein-coding common_peak2_226_1862_0.126532788046093_10.9266783529647_1.9504582287007 chr11 69893498 69896795 + 1.9504582287007 NA intron (NM_153788, intron 1 of 21) intron (NM_153788, intron 1 of 21) 393 NM_153788 216859 Mm.288671 NM_153788 ENSMUSG00000001588 Acap1 Centb1 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 protein-coding common_peak2_147_1342_-0.158235315843319_10.3121259315058_1.95037781596018 chr10 4611232 4614015 + 1.95037781596018 NA intron (NM_007956, intron 1 of 8) intron (NM_007956, intron 1 of 8) 634 NM_007956 13982 Mm.9213 NM_007956 ENSMUSG00000019768 Esr1 ER|ER-alpha|ERa|ERalpha|ESR|Estr|Estra|Nr3a1 estrogen receptor 1 (alpha) protein-coding common_peak1_70_579_-0.246749544167917_9.05653431793097_1.94988799880161 chr5 110230894 110231614 + 1.94988799880161 NA exon (NM_001253814, exon 1 of 13) exon (NM_001253814, exon 1 of 13) 250 NM_027922 71782 Mm.288442 NM_027922 ENSMUSG00000029501 Ankle2 1110001J12Rik|AI661024|D5Ertd585e ankyrin repeat and LEM domain containing 2 protein-coding common_peak2_70_579_-0.246749544167917_9.05653431793097_1.94988799880161 chr13 95986831 95989384 + 1.94988799880161 NA intron (NM_029210, intron 6 of 12) intron (NM_029210, intron 6 of 12) -96185 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding common_peak1_241_2021_0.121611873918789_11.0423732188624_1.94985767285574 chr4 116074418 116076626 + 1.94985767285574 NA promoter-TSS (NM_025641) promoter-TSS (NM_025641) 253 NM_153521 230654 Mm.3655 NM_153521 ENSMUSG00000028703 Lrrc41 AA409966|AW555107|D630045E04Rik|D730026A16Rik|MUF1 leucine rich repeat containing 41 protein-coding unique_peak2_28_117_0.466020265150727_7.1156531819372_1.94950534790339 chr9 66614868 66615845 + 1.94950534790339 NA Intergenic Intergenic -22241 NM_001302122 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding common_peak1_28_117_0.466020265150727_7.1156531819372_1.94950534790339-2 chr8 57799818 57800440 + 1.94950534790339 NA intron (NM_175032, intron 10 of 11) intron (NM_175032, intron 10 of 11) -147074 NM_144731 108150 Mm.62886 NM_144731 ENSMUSG00000031608 Galnt7 AI225872 UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 protein-coding common_peak1_28_117_0.466020265150727_7.1156531819372_1.94950534790339 chr11 22854412 22855121 + 1.94950534790339 NA intron (NM_001169114, intron 1 of 1) intron (NM_001169114, intron 1 of 1) 4969 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak2_402_3866_0.0886880707263327_11.961343084446_1.94843104654804 chr6 38532450 38535949 + 1.94843104654804 NA promoter-TSS (NM_025363) promoter-TSS (NM_025363) -662 NM_025363 66117 Mm.158971 NM_025363 ENSMUSG00000019689 Fmc1 1110001J03Rik formation of mitochondrial complex V assembly factor 1 protein-coding common_peak2_150_1100_0.163921631421182_10.186559569275_1.94835139049228 chr5 23615710 23617611 + 1.94835139049228 NA promoter-TSS (NM_009274) promoter-TSS (NM_009274) -89 NM_009274 20817 Mm.288728 NM_009274 ENSMUSG00000062604 Srpk2 AW226533|AW492537|AW547358|Wbp6|mSRPK2 serine/arginine-rich protein specific kinase 2 protein-coding common_peak1_53_280_0.314393557805024_8.29162309912344_1.94796406780905 chr1 118321831 118322680 + 1.94796406780905 NA intron (NM_026472, intron 1 of 6) intron (NM_026472, intron 1 of 6) 412 NM_026472 67949 Mm.280311 NM_026472 ENSMUSG00000026377 Nifk AI852665|C130020J04Rik|Mki67ip nucleolar protein interacting with the FHA domain of MKI67 protein-coding common_peak1_270_2335_0.113642974467389_11.2466460461137_1.94788267746478 chr7 45081675 45083989 + 1.94788267746478 NA TTS (NM_026555) TTS (NM_026555) 9381 NM_026555 52377 Mm.29997 NM_026555 ENSMUSG00000019539 Rcn3 6030455P07Rik|D530026G20Rik|D7Ertd671e|RLP49 reticulocalbin 3, EF-hand calcium binding domain protein-coding common_peak2_223_2179_-0.123710736087295_11.0282570516206_1.94748311911053 chr2 164081298 164085765 + 1.94748311911053 NA intron (NM_021420, intron 2 of 10) intron (NM_021420, intron 2 of 10) 9353 NM_021420 58231 Mm.234472 NM_021420 ENSMUSG00000018209 Stk4 AI447339|AU020804|Kas-2|Mst1|Ysk3 serine/threonine kinase 4 protein-coding common_peak1_17_132_-0.550597073628523_6.77998389868693_1.94726018938361-3 chr8 70593999 70594371 + 1.94726018938361 NA promoter-TSS (NM_023627) promoter-TSS (NM_023627) -296 NM_023627 71780 Mm.29357 NM_023627 ENSMUSG00000019139 Isyna1 1300017C10Rik|AU018670 myo-inositol 1-phosphate synthase A1 protein-coding common_peak1_17_132_-0.550597073628523_6.77998389868693_1.94726018938361-2 chr2 170129855 170130283 + 1.94726018938361 NA intron (NM_001159683, intron 2 of 6) intron (NM_001159683, intron 2 of 6) 1151 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding unique_peak2_17_132_-0.550597073628523_6.77998389868693_1.94726018938361-2 chr16 64757242 64758004 + 1.94726018938361 NA Intergenic ORR1A2|LTR|ERVL-MaLR 13316 NM_026273 67609 Mm.212157 NM_026273 ENSMUSG00000059920 4930453N24Rik AI649104|din RIKEN cDNA 4930453N24 gene protein-coding unique_peak2_17_132_-0.550597073628523_6.77998389868693_1.94726018938361-3 chr9 58246932 58247831 + 1.94726018938361 NA exon (NM_008884, exon 2 of 8) exon (NM_008884, exon 2 of 8) 2405 NM_178087 18854 Mm.392123 NM_008884 ENSMUSG00000036986 Pml 1200009E24Rik|AI661194|Trim19 promyelocytic leukemia protein-coding unique_peak2_17_132_-0.550597073628523_6.77998389868693_1.94726018938361 chr1 144774796 144775645 + 1.94726018938361 NA exon (NM_022881, exon 1 of 5) exon (NM_022881, exon 1 of 5) 201 NM_022881 64214 Mm.253927 NM_022881 ENSMUSG00000026357 Rgs18 - regulator of G-protein signaling 18 protein-coding common_peak1_17_132_-0.550597073628523_6.77998389868693_1.94726018938361 chr10 39625234 39625651 + 1.94726018938361 NA intron (NR_038037, intron 2 of 2) intron (NR_038037, intron 2 of 2) 12508 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak1_17_132_-0.550597073628523_6.77998389868693_1.94726018938361-4 chr8 106063004 106063484 + 1.94726018938361 NA intron (NM_010901, intron 1 of 9) intron (NM_010901, intron 1 of 9) 3641 NM_010901 18021 Mm.383185 NM_010901 ENSMUSG00000031902 Nfatc3 C80703|D8Ertd281e|NFAT4|NFATx nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 protein-coding common_peak1_250_2118_0.118629608441829_11.1084826765931_1.94713181153805 chr9 32698589 32702824 + 1.94713181153805 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 4664 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_34_153_0.414659173828633_7.47411612760922_1.94697533638447-2 chr14 74645843 74646599 + 1.94697533638447 NA intron (NM_172812, intron 2 of 2) intron (NM_172812, intron 2 of 2) 5381 NM_172812 15558 Mm.214351 NM_172812 ENSMUSG00000034997 Htr2a E030013E04|Htr-2|Htr2 5-hydroxytryptamine (serotonin) receptor 2A protein-coding common_peak1_34_153_0.414659173828633_7.47411612760922_1.94697533638447 chr11 116429354 116429953 + 1.94697533638447 NA Intergenic Intergenic -4441 NM_176902 319370 Mm.258466 NM_176902 ENSMUSG00000050628 Ubald2 1110014K08Rik|D030012E24Rik|Fam100b UBA-like domain containing 2 protein-coding common_peak1_36_166_0.396079358737358_7.58174397184273_1.94684111419776 chr11 78550050 78550690 + 1.94684111419776 NA intron (NM_133706, intron 1 of 2) ID4|SINE|ID 365 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e transmembrane protein 97 protein-coding common_peak1_87_738_-0.216408189079488_9.42122645960641_1.94679385363777 chr5 28071256 28071912 + 1.94679385363777 NA exon (NM_153526, exon 1 of 5) exon (NM_153526, exon 1 of 5) 172 NM_153526 231070 Mm.30221 NM_153526 ENSMUSG00000045294 Insig1 1810013C12Rik|Insig-1 insulin induced gene 1 protein-coding unique_peak2_56_452_-0.278868520496061_8.6839329797982_1.94623566414585 chr3 54723007 54725019 + 1.94623566414585 NA Intergenic Intergenic 11351 NM_027148 69639 Mm.29253 NM_027148 ENSMUSG00000027752 Exosc8 2310032N20Rik|CIP3|mKIAA4013 exosome component 8 protein-coding common_peak2_29_123_0.454460122210828_7.18142637149229_1.94525130280886-2 chr12 86725721 86726556 + 1.94525130280886 NA intron (NM_144524, intron 1 of 9) CpG 322 NM_144524 68737 Mm.63979 NM_144524 ENSMUSG00000021257 Angel1 1110030H02Rik|mKIAA0759 angel homolog 1 protein-coding common_peak2_29_123_0.454460122210828_7.18142637149229_1.94525130280886 chr10 130412032 130412730 + 1.94525130280886 NA Intergenic Intergenic 17231 NM_001102602 623734 Mm.469840 NM_001102602 ENSMUSG00000092048 Vmn2r85 EG623734 vomeronasal 2, receptor 85 protein-coding common_peak1_22_170_-0.479391710792388_7.1781566594897_1.94525130280886-3 chr9 44150029 44150514 + 1.94525130280886 NA 3' UTR (NM_007619, exon 16 of 16) 3' UTR (NM_007619, exon 16 of 16) 15613 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding common_peak1_22_170_-0.479391710792388_7.1781566594897_1.94525130280886 chr11 60931355 60931918 + 1.94525130280886 NA promoter-TSS (NM_008928) promoter-TSS (NM_008928) 231 NR_027800 24082 Mm.46270 NM_025293 ENSMUSG00000042549 Map2k3os F3-1|Gm16516|Gtlf3a mitogen-activated protein kinase kinase 3, opposite strand ncRNA common_peak1_22_170_-0.479391710792388_7.1781566594897_1.94525130280886-2 chr7 66385866 66386378 + 1.94525130280886 NA intron (NM_146191, intron 1 of 33) Lx7|LINE|L1 2219 NM_146191 233328 Mm.33284 NM_146191 ENSMUSG00000015133 Lrrk1 AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790 leucine-rich repeat kinase 1 protein-coding common_peak1_43_340_-0.327217875143866_8.25001899145224_1.94509068060592 chr2 126502282 126503023 + 1.94509068060592 NA Intergenic Intergenic -11099 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak2_43_340_-0.327217875143866_8.25001899145224_1.94509068060592 chr2 143062516 143063798 + 1.94509068060592 NA promoter-TSS (NM_021335) promoter-TSS (NM_021335) 88 NM_021335 20639 Mm.1323 NM_021335 ENSMUSG00000008333 Snrpb2 2810052G09Rik U2 small nuclear ribonucleoprotein B protein-coding common_peak2_318_3307_-0.0996987915308534_11.6418941234058_1.94507146533471 chr14 56810361 56813755 + 1.94507146533471 NA promoter-TSS (NM_001253752) promoter-TSS (NM_001253752) -342 NM_144842 219105 Mm.473172 NM_144842 ENSMUSG00000040123 Zmym5 9830124H08Rik zinc finger, MYM-type 5 protein-coding common_peak2_90_767_-0.212617458001109_9.4786537717206_1.94490370135174 chr2 122651510 122653330 + 1.94490370135174 NA Intergenic Intergenic 11617 NR_030547 387165 NR_030547 ENSMUSG00000076309 Mir147 Mirn147|mmu-mir-147 microRNA 147 ncRNA common_peak2_111_745_0.1967575521354_9.64141059632294_1.9445020986199 chr2 120969774 120971515 + 1.9445020986199 NA promoter-TSS (NM_009461) promoter-TSS (NM_009461) 71 NM_009461 22222 Mm.389330 NM_009461 ENSMUSG00000027272 Ubr1 AI504731 ubiquitin protein ligase E3 component n-recognin 1 protein-coding common_peak1_33_147_0.420695206531577_7.41980096889474_1.94414657922282 chr17 23192660 23193239 + 1.94414657922282 NA intron (NM_009555, intron 1 of 5) intron (NM_009555, intron 1 of 5) 279 NM_009555 22700 Mm.437934 NM_009555 ENSMUSG00000002617 Zfp40 CTfin12|NTfin12|Zfp-40 zinc finger protein 40 protein-coding common_peak1_33_147_0.420695206531577_7.41980096889474_1.94414657922282-2 chr7 24457259 24457890 + 1.94414657922282 NA Intergenic Intergenic -4926 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding common_peak2_165_1244_0.154188153399261_10.3590241036551_1.94392704366204 chr1 139421298 139423130 + 1.94392704366204 NA promoter-TSS (NM_172643) promoter-TSS (NM_172643) -169 NM_172643 226470 Mm.119711 NM_172643 ENSMUSG00000033964 Zbtb41 8430415N23Rik|9430031N01|9830132G07Rik|AI316857 zinc finger and BTB domain containing 41 protein-coding common_peak1_23_177_-0.461957962874303_7.24475444952925_1.94279294012171 chr12 8351517 8351974 + 1.94279294012171 NA Intergenic Intergenic 38312 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak2_23_177_-0.461957962874303_7.24475444952925_1.94279294012171 chr2 128486808 128487921 + 1.94279294012171 NA Intergenic Intergenic -58013 NR_028590 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_30_129_0.444314391705852_7.24452500888138_1.94279294012166 chr10 25296651 25297298 + 1.94279294012166 NA intron (NM_018747, intron 1 of 7) CpG 2189 NM_018747 432442 Mm.485937 NM_018747 ENSMUSG00000039166 Akap7 6430401D08|AI662165|AKAP15|Akap18|BB170514 A kinase (PRKA) anchor protein 7 protein-coding common_peak2_30_129_0.444314391705852_7.24452500888138_1.94279294012166 chr14 36863637 36864460 + 1.94279294012166 NA Intergenic Intergenic 71520 NM_028407 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding common_peak1_42_331_-0.329312261092975_8.21038330080044_1.94278544064391 chr17 71102750 71103463 + 1.94278544064391 NA intron (NM_010867, intron 25 of 37) intron (NM_010867, intron 25 of 37) -80872 NM_022882 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak1_42_331_-0.329312261092975_8.21038330080044_1.94278544064391-2 chr2 90504384 90505435 + 1.94278544064391 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -25735 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_431_4742_-0.0829273414945071_12.1701204823323_1.9427179364798 chr2 73448450 73456833 + 1.9427179364798 NA intron (NM_153138, intron 1 of 7) intron (NM_153138, intron 1 of 7) 1248 NM_001289722 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak2_32_141_0.427572828156197_7.36353353358278_1.94241279509031 chr16 94289690 94290493 + 1.94241279509031 NA Intergenic CpG -2235 NM_139145 110948 Mm.30921 NM_139145 ENSMUSG00000040820 Hlcs 410I21.SP6|D16Jhu34 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) protein-coding unique_peak2_32_141_0.427572828156197_7.36353353358278_1.94241279509031 chr5 5514181 5515097 + 1.94241279509031 NA 5' UTR (NM_001193659, exon 1 of 4) 5' UTR (NM_001193659, exon 1 of 4) 150 NM_001193660 64945 Mm.40132 NM_022890 ENSMUSG00000046798 Cldn12 - claudin 12 protein-coding common_peak1_67_384_0.268046247764619_8.72273775946457_1.94231673962307 chr18 67448497 67449206 + 1.94231673962307 NA intron (NM_027130, intron 1 of 16) CpG 285 NM_027130 69597 Mm.426052 NM_027130 ENSMUSG00000024527 Afg3l2 2310036I02Rik|AW260507|Emv66|par AFG3-like AAA ATPase 2 protein-coding common_peak1_116_789_0.191369122696679_9.7213934044128_1.94196461073918 chr14 105922423 105924096 + 1.94196461073918 NA Intergenic Intergenic -26440 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty homolog 2 (Drosophila) protein-coding common_peak1_65_533_-0.256763672840318_8.9323140952674_1.94193681885907 chr17 12768931 12769858 + 1.94193681885907 NA intron (NM_010515, intron 1 of 47) CpG 312 NM_010515 16004 Mm.26553 NM_010515 ENSMUSG00000023830 Igf2r AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300 insulin-like growth factor 2 receptor protein-coding common_peak2_166_1545_-0.147577998236889_10.5205356048064_1.94093150750951 chr5 3646494 3648133 + 1.94093150750951 NA intron (NM_026033, intron 1 of 4) CpG 623 NM_026033 67210 Mm.178424 NM_026033 ENSMUSG00000007415 Gatad1 2310031E19Rik|2810047M21Rik|8430439A17Rik|9130430G15Rik|B330017N08Rik|ENSMUSG00000073241|Odag GATA zinc finger domain containing 1 protein-coding common_peak1_46_232_0.338944942771738_8.03365861604015_1.94035070181671 chr13 55570370 55571067 + 1.94035070181671 NA 5' UTR (NM_145382, exon 1 of 11) 5' UTR (NM_145382, exon 1 of 11) 402 NM_145382 212483 Mm.35661 NM_145382 ENSMUSG00000021495 Fam193b IRIZIO|Kiaa1931 family with sequence similarity 193, member B protein-coding common_peak1_46_232_0.338944942771738_8.03365861604015_1.94035070181671-2 chr4 130045034 130045839 + 1.94035070181671 NA Intergenic Intergenic -2404 NM_028266 107581 Mm.41860 NM_028266 ENSMUSG00000040690 Col16a1 2700007F12Rik|A530052M23Rik|AI838662|CA1F collagen, type XVI, alpha 1 protein-coding common_peak1_55_443_-0.281238805145824_8.65379646377719_1.93863322972817 chr5 118465406 118466604 + 1.93863322972817 NA Intergenic Intergenic -94714 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak2_170_1588_-0.145270173645061_10.561268322526_1.93846221654353 chr7 28168283 28170783 + 1.93846221654353 NA promoter-TSS (NM_007991) promoter-TSS (NM_007991) -215 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding common_peak1_62_346_0.282817307373522_8.58020050626502_1.93683416952725 chr3 19894762 19895521 + 1.93683416952725 NA non-coding (NR_027985, exon 1 of 1) non-coding (NR_027985, exon 1 of 1) 270 NR_027985 70808 Mm.427103 NR_027985 ENSMUSG00000048106 4632415L05Rik AI662792 RRS1 ribosome biogenesis regulator homolog pseudogene pseudo common_peak2_62_346_0.282817307373522_8.58020050626502_1.93683416952725 chr12 101957316 101959141 + 1.93683416952725 NA promoter-TSS (NM_029705) promoter-TSS (NM_029705) 15 NM_029705 110616 Mm.271914 NM_029705 ENSMUSG00000021189 Atxn3 2210008M02Rik|AI463012|AI647473|ATX3|MJD1|Mjd|Sca3|ataxin-3 ataxin 3 protein-coding common_peak1_20_73_0.568021278169548_6.49346400471372_1.93673393770197-2 chr19 10949550 10949986 + 1.93673393770197 NA promoter-TSS (NM_023731) promoter-TSS (NM_023731) -502 NM_023731 108673 Mm.294908 NM_023731 ENSMUSG00000024732 Ccdc86 4933411H20Rik|6720480F16Rik|D19Ertd678e coiled-coil domain containing 86 protein-coding common_peak1_20_73_0.568021278169548_6.49346400471372_1.93673393770197 chr11 119622698 119623175 + 1.93673393770197 NA intron (NM_028898, intron 1 of 33) BC1_Mm|scRNA|scRNA 20031 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak1_14_110_-0.612371744938758_6.48822999388073_1.93673393770197 chr2 118598316 118598757 + 1.93673393770197 NA intron (NM_009773, intron 1 of 22) intron (NM_009773, intron 1 of 22) 325 NM_009773 12236 Mm.29133 NM_009773 ENSMUSG00000040084 Bub1b AU045529|BUBR1 BUB1B, mitotic checkpoint serine/threonine kinase protein-coding common_peak1_20_73_0.568021278169548_6.49346400471372_1.93673393770197-3 chr5 21035331 21035900 + 1.93673393770197 NA intron (NM_011203, intron 1 of 17) B2_Mm2|SINE|B2 20182 NM_011203 19248 Mm.319117 NM_011203 ENSMUSG00000028771 Ptpn12 P19-PTP|PTP-P19|PTP-PEST|PTPG1 protein tyrosine phosphatase, non-receptor type 12 protein-coding common_peak1_20_73_0.568021278169548_6.49346400471372_1.93673393770197-5 chrX 48427214 48427657 + 1.93673393770197 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 35697 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak1_20_73_0.568021278169548_6.49346400471372_1.93673393770197-4 chr8 122287542 122288065 + 1.93673393770197 NA intron (NM_009569, intron 1 of 9) intron (NM_009569, intron 1 of 9) 5662 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_60_488_-0.269171203905261_8.7991050529996_1.93654708537658 chr17 34647144 34647847 + 1.93654708537658 NA intron (NM_017406, intron 1 of 17) CpG 349 NM_017406 12915 Mm.4068 NM_017406 ENSMUSG00000015461 Atf6b AA617266|ATF6beta|Creb-rp|Crebl1 activating transcription factor 6 beta protein-coding common_peak2_60_488_-0.269171203905261_8.7991050529996_1.93654708537658 chr2 130500884 130502685 + 1.93654708537658 NA intron (NM_008980, intron 1 of 21) intron (NM_008980, intron 1 of 21) 51506 NM_001163688 19262 Mm.224246 NM_008980 ENSMUSG00000027303 Ptpra Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha protein tyrosine phosphatase, receptor type, A protein-coding common_peak2_49_391_-0.302082340792467_8.46366867371897_1.93605247346602 chr1 4807264 4808456 + 1.93605247346602 NA promoter-TSS (NM_008866) promoter-TSS (NM_008866) -33 NM_008866 18777 Mm.299955 NM_008866 ENSMUSG00000025903 Lypla1 Pla1a lysophospholipase 1 protein-coding common_peak1_49_391_-0.302082340792467_8.46366867371897_1.93605247346602 chr11 61761653 61762126 + 1.93605247346602 NA intron (NM_001164243, intron 1 of 10) CpG 199 NM_144806 212627 Mm.27703 NM_144806 ENSMUSG00000020528 Prpsap2 A230054F23Rik phosphoribosyl pyrophosphate synthetase-associated protein 2 protein-coding common_peak2_134_1206_-0.166896807037107_10.1537615572365_1.93562667145117 chr19 29640367 29642354 + 1.93562667145117 NA intron (NM_001081213, intron 2 of 14) intron (NM_001081213, intron 2 of 14) 7060 NM_001081213 226090 Mm.267131 NM_146098 ENSMUSG00000046324 Ermp1 D19Ertd410e|D19Wsu12e|Fxna|mKIAA1815 endoplasmic reticulum metallopeptidase 1 protein-coding common_peak2_283_2480_0.109678148327296_11.3315450940561_1.93556908682085 chr1 183296372 183298852 + 1.93556908682085 NA promoter-TSS (NM_027861) promoter-TSS (NM_027861) 552 NM_181732 108909 Mm.290502 NM_145626 ENSMUSG00000042901 Aida 2610208M17Rik|BC004835 axin interactor, dorsalization associated protein-coding common_peak1_212_2053_-0.126926404317894_10.9407572641592_1.93451556108129 chr11 86357090 86358394 + 1.93451556108129 NA promoter-TSS (NM_001080931) promoter-TSS (NM_001080931) -217 NM_001080931 327987 Mm.341886 NM_001080931 ENSMUSG00000034297 Med13 1110067M05Rik|D030023K18|Thrap1|Trap240 mediator complex subunit 13 protein-coding common_peak1_232_1926_0.123970704578127_10.9741262085848_1.93451188585146 chr13 101766771 101769061 + 1.93451188585146 NA intron (NM_001077495, intron 1 of 15) CpG 301 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_66_376_0.27212298688106_8.69448220670919_1.93432079962279 chr14 25559737 25560953 + 1.93432079962279 NA intron (NM_001310666, intron 3 of 23) intron (NM_001310666, intron 3 of 23) 25906 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_135_961_0.173480110763199_9.99663313915164_1.9339249002913 chr1 106758572 106760659 + 1.9339249002913 NA exon (NM_001316750, exon 1 of 9) exon (NM_001316750, exon 1 of 9) 127 NM_027534 70750 Mm.458911 NM_027534 ENSMUSG00000009905 Kdsr 6330410P18Rik|9430079B08Rik|Fvt1 3-ketodihydrosphingosine reductase protein-coding common_peak2_72_597_-0.241682647812477_9.10316035029187_1.93316219667632 chr12 65035769 65037292 + 1.93316219667632 NA intron (NM_177806, intron 1 of 13) CpG 196 NM_177806 328110 Mm.283339 NM_177806 ENSMUSG00000035597 Prpf39 Srcs1 pre-mRNA processing factor 39 protein-coding common_peak2_186_1762_-0.136899085218158_10.7153672167111_1.93304901623201 chr11 98808605 98810905 + 1.93304901623201 NA promoter-TSS (NM_138660) promoter-TSS (NM_138660) -53 NM_138660 192160 Mm.40120 NM_138660 ENSMUSG00000078676 Casc3 Btz|Mln51 cancer susceptibility candidate 3 protein-coding common_peak2_70_407_0.260734203875522_8.80279244390926_1.93288611944178 chr1 128831096 128833126 + 1.93288611944178 NA Intergenic Intergenic -239812 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_18_139_-0.528918813548076_6.86482361017093_1.9327917305633-2 chr11 115131758 115132203 + 1.9327917305633 NA intron (NM_145634, intron 1 of 6) L2|LINE|L2 2012 NM_001169153 246746 Mm.277387 NM_145634 ENSMUSG00000047798 Cd300lf CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3 CD300 molecule like family member F protein-coding common_peak1_18_139_-0.528918813548076_6.86482361017093_1.9327917305633 chr10 41472618 41472972 + 1.9327917305633 NA Intergenic ORR1A3-int|LTR|ERVL-MaLR -3519 NM_001164433 171580 Mm.290431 NM_138315 ENSMUSG00000019823 Mical1 MICAL|MICAL-1|Nical microtubule associated monooxygenase, calponin and LIM domain containing 1 protein-coding common_peak1_163_1512_-0.148528384778599_10.4889320798274_1.93272223353056 chr12 8498681 8500090 + 1.93272223353056 NA exon (NM_007483, exon 1 of 1) exon (NM_007483, exon 1 of 1) 600 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding common_peak2_163_1512_-0.148528384778599_10.4889320798274_1.93272223353056 chr10 61145470 61148441 + 1.93272223353056 NA intron (NM_001316674, intron 1 of 14) intron (NM_001316674, intron 1 of 14) 729 NM_009163 20397 Mm.412319 NM_009163 ENSMUSG00000020097 Sgpl1 AI428538|D10Xrf456|S1PL|Spl sphingosine phosphate lyase 1 protein-coding common_peak2_254_2162_0.116958414043799_11.1372971569839_1.93230320990415 chr5 118476212 118479526 + 1.93230320990415 NA Intergenic Intergenic -82850 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_325_3392_-0.0978889596032495_11.6794012349094_1.9322288719153 chr8 4676940 4679189 + 1.9322288719153 NA Intergenic CpG 64894 NM_145591 233987 Mm.102799 NM_145591 ENSMUSG00000058748 Zfp958 - zinc finger protein 958 protein-coding common_peak1_84_518_0.23205111949461_9.13561628810519_1.93221560705222 chr5 107597338 107598436 + 1.93221560705222 NA promoter-TSS (NM_133248) promoter-TSS (NM_133248) 1 NM_001161738 170823 Mm.41417 NM_133248 ENSMUSG00000029276 Glmn 9330160J16Rik|AW227515|Fap48|Fap68 glomulin, FKBP associated protein protein-coding common_peak1_24_185_-0.453143618971647_7.31258700162221_1.93160449474508 chr18 39139072 39139607 + 1.93160449474508 NA intron (NM_175164, intron 10 of 22) intron (NM_175164, intron 10 of 22) 146194 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_24_185_-0.453143618971647_7.31258700162221_1.93160449474508-3 chr7 43399662 43400126 + 1.93160449474508 NA Intergenic L2|LINE|L2 -8386 NM_172900 243958 Mm.24444 NM_172900 ENSMUSG00000030468 Siglecg 9830164H23|A630096C01Rik|Siglec-G|Siglec10|mSiglec-G sialic acid binding Ig-like lectin G protein-coding common_peak1_24_185_-0.453143618971647_7.31258700162221_1.93160449474508-2 chr2 117418453 117418885 + 1.93160449474508 NA Intergenic Intergenic -75792 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_24_185_-0.453143618971647_7.31258700162221_1.93160449474508-4 chr8 3620851 3621373 + 1.93160449474508 NA promoter-TSS (NM_001195244) promoter-TSS (NM_001195244) 184 NM_026156 67439 Mm.23739 NM_026156 ENSMUSG00000019470 Xab2 0610041O14Rik|AV025587 XPA binding protein 2 protein-coding common_peak2_227_2224_-0.121866278818235_11.058656481332_1.93130756120649 chr8 83696221 83700509 + 1.93130756120649 NA intron (NM_177262, intron 1 of 21) intron (NM_177262, intron 1 of 21) 814 NM_177262 320795 Mm.213000 NM_177262 ENSMUSG00000057672 Pkn1 DBK|F730027O18Rik|PAK1|PRK1|Pkn|Prkcl1|Stk3 protein kinase N1 protein-coding common_peak2_119_1053_-0.179778096666798_9.95177010330382_1.93110029372167 chr19 8756167 8758076 + 1.93110029372167 NA promoter-TSS (NM_016813) promoter-TSS (NM_016813) 4 NM_001276704 53319 Mm.7271 NM_016813 ENSMUSG00000010097 Nxf1 Mex67|Mvb1|Tap nuclear RNA export factor 1 protein-coding common_peak1_44_218_0.351391577963458_7.9504828485829_1.93090095933395 chr7 117380875 117381981 + 1.93090095933395 NA exon (NM_175645, exon 1 of 12) exon (NM_175645, exon 1 of 12) 449 NM_175645 233781 Mm.461427 NM_175645 ENSMUSG00000030657 Xylt1 8030490L12 xylosyltransferase 1 protein-coding common_peak2_44_218_0.351391577963458_7.9504828485829_1.93090095933395 chr9 15709218 15710723 + 1.93090095933395 NA intron (NM_172289, intron 1 of 10) CpG 201 NM_172289 234967 Mm.138815 NM_172289 ENSMUSG00000043885 Slc36a4 6330573I15Rik|PAT4 solute carrier family 36 (proton/amino acid symporter), member 4 protein-coding common_peak2_48_382_-0.304324345014273_8.42903840941782_1.93069935196014 chr1 185104695 185105721 + 1.93069935196014 NA Intergenic Intergenic -98960 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding common_peak2_96_617_0.213875335459035_9.37840069563389_1.9303483733107 chr6 47771697 47773213 + 1.9303483733107 NA Intergenic CpG -19530 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_329_3002_0.0998490861684083_11.6021133026414_1.93017130367538 chr18 34505916 34507633 + 1.93017130367538 NA promoter-TSS (NM_146084) promoter-TSS (NM_146084) 49 NM_146084 225358 Mm.226899 NM_146084 ENSMUSG00000036501 Fam13b 2610024E20Rik|AW060714|AW546153 family with sequence similarity 13, member B protein-coding common_peak1_125_870_0.181692562539274_9.8573751898685_1.9294444262527 chr2 155691660 155692375 + 1.9294444262527 NA intron (NM_019828, intron 1 of 18) CpG 367 NM_019828 56407 Mm.234944 NM_019828 ENSMUSG00000038324 Trpc4ap 4833429F06Rik|D2Ertd113e|Trrp4ap|mFLJ00177|truss transient receptor potential cation channel, subfamily C, member 4 associated protein protein-coding common_peak2_103_893_-0.195485154169674_9.70638844409848_1.92942356059018 chr5 124921661 124923799 + 1.92942356059018 NA Intergenic URR1B|DNA|hAT-Charlie 60025 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak1_21_78_0.556016994516848_6.58178924543553_1.92781930819247-3 chr1 138560519 138561040 + 1.92781930819247 NA intron (NM_001311148, intron 2 of 7) intron (NM_001311148, intron 2 of 7) 58978 NM_021605 59125 Mm.143817 NM_021605 ENSMUSG00000026393 Nek7 2810460C19Rik|AU020186 NIMA (never in mitosis gene a)-related expressed kinase 7 protein-coding common_peak1_21_78_0.556016994516848_6.58178924543553_1.92781930819247-6 chr2 10048748 10049246 + 1.92781930819247 NA promoter-TSS (NM_027748) promoter-TSS (NM_027748) -388 NM_027748 209361 Mm.86343 NM_027748 ENSMUSG00000025782 Taf3 140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140 TATA-box binding protein associated factor 3 protein-coding unique_peak1_21_78_0.556016994516848_6.58178924543553_1.92781930819247 chr16 92946547 92947153 + 1.92781930819247 NA Intergenic Intergenic -120776 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_21_78_0.556016994516848_6.58178924543553_1.92781930819247-5 chr14 121312894 121313272 + 1.92781930819247 NA intron (NM_145465, intron 2 of 10) MLT1B|LTR|ERVL-MaLR 66147 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_21_78_0.556016994516848_6.58178924543553_1.92781930819247 chr1 62872190 62872762 + 1.92781930819247 NA Intergenic ORR1A2|LTR|ERVL-MaLR -77744 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA common_peak1_21_78_0.556016994516848_6.58178924543553_1.92781930819247-2 chr1 85749594 85750130 + 1.92781930819247 NA Intergenic Intergenic -2086 NR_106172 102466882 NR_106172 ENSMUSG00000098634 Mir8096 Gm27479|mmu-mir-8096 microRNA 8096 ncRNA common_peak1_21_78_0.556016994516848_6.58178924543553_1.92781930819247-4 chr10 80625617 80626113 + 1.92781930819247 NA intron (NM_134002, intron 1 of 10) intron (NM_134002, intron 1 of 10) 3085 NM_134002 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding common_peak1_268_2315_0.112939583579772_11.2338893297791_1.92780318842215 chr5 123014178 123016193 + 1.92780318842215 NA 5' UTR (NM_175423, exon 1 of 2) 5' UTR (NM_175423, exon 1 of 2) 111 NM_175423 109305 Mm.218582 NM_175423 ENSMUSG00000049686 Orai1 D730049H07Rik|Tmem142a|orai-1 ORAI calcium release-activated calcium modulator 1 protein-coding common_peak2_171_1598_-0.14400243085367_10.5709530080535_1.92769846625166 chr16 35938207 35940347 + 1.92769846625166 NA promoter-TSS (NM_001013371) promoter-TSS (NM_001013371) -250 NM_001013371 209200 Mm.390852 NM_001013371 ENSMUSG00000049502 Dtx3l AU042200|BC023741 deltex 3-like, E3 ubiquitin ligase protein-coding common_peak1_16_53_0.648648758810704_6.07921188156882_1.92708524847946-2 chr5 38904132 38904479 + 1.92708524847946 NA Intergenic Intergenic -27612 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak1_16_53_0.648648758810704_6.07921188156882_1.92708524847946 chr15 76722302 76722690 + 1.92708524847946 NA promoter-TSS (NM_198119) promoter-TSS (NM_198119) -323 NM_198119 378937 Mm.289666 NM_198119 ENSMUSG00000033707 Lrrc24 6430402H13Rik leucine rich repeat containing 24 protein-coding unique_peak1_16_53_0.648648758810704_6.07921188156882_1.92708524847946 chr12 18610041 18610474 + 1.92708524847946 NA Intergenic CpG 95747 NM_001201330 236366 Mm.352227 NM_001033157 ENSMUSG00000073197 5730507C01Rik - RIKEN cDNA 5730507C01 gene protein-coding common_peak2_216_1758_0.129678546527815_10.8453790407359_1.92670573910484 chr3 28262075 28265005 + 1.92670573910484 NA 5' UTR (NM_001163009, exon 1 of 31) 5' UTR (NM_001163009, exon 1 of 31) 326 NM_001163009 665113 Mm.126193 NM_026910 ENSMUSG00000027692 Tnik 1500031A17Rik|4831440I19Rik|AI451411|C530008O15Rik|C630040K21Rik TRAF2 and NCK interacting kinase protein-coding common_peak1_13_39_0.738024343944208_5.69094026685947_1.92631927296918 chr4 101203401 101203764 + 1.92631927296918 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 61700 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding unique_peak2_8_67_-0.809389790564027_5.68276794596833_1.92631927296918-2 chrX 125104759 125105464 + 1.92631927296918 NA Intergenic MMVL30-int|LTR|ERV1 -969201 NM_001100616 100038941 Mm.388852 NM_001100616 ENSMUSG00000072049 Vmn2r121 EG625699 vomeronasal 2, receptor 121 protein-coding unique_peak2_8_67_-0.809389790564027_5.68276794596833_1.92631927296918 chr10 82764186 82764730 + 1.92631927296918 NA promoter-TSS (NM_010914) promoter-TSS (NM_010914) -317 NM_010914 18045 Mm.245998 NM_010914 ENSMUSG00000020248 Nfyb AA985999|Cbf-A nuclear transcription factor-Y beta protein-coding common_peak1_13_39_0.738024343944208_5.69094026685947_1.92631927296918-2 chr8 54439251 54439605 + 1.92631927296918 NA Intergenic Intergenic 90570 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak2_56_302_0.301324736077222_8.39383635151156_1.9257214456094 chr1 33882846 33884110 + 1.9257214456094 NA exon (NM_177235, exon 2 of 7) exon (NM_177235, exon 2 of 7) 24143 NM_177235 320705 Mm.336619 NM_177235 ENSMUSG00000042182 Bend6 B230209C24Rik BEN domain containing 6 protein-coding common_peak1_71_587_-0.241762360590984_9.07879116454087_1.9254940208684 chr10 96401110 96402093 + 1.9254940208684 NA Intergenic Lx10|LINE|L1 175394 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_26_200_-0.428844124339333_7.43662962900926_1.92517759986468 chr14 27343800 27344337 + 1.92517759986468 NA intron (NM_001289687, intron 1 of 9) ORR1F|LTR|ERVL-MaLR 8031 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_325_2956_0.100538226987402_11.580187641614_1.9246830494356 chr3 144718355 144722076 + 1.9246830494356 NA 5' UTR (NM_019464, exon 1 of 9) 5' UTR (NM_019464, exon 1 of 9) 120 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak2_91_776_-0.210085361941488_9.49672810743697_1.92443333072043 chr5 138084881 138086001 + 1.92443333072043 NA intron (NM_029869, intron 1 of 3) intron (NM_029869, intron 1 of 3) 357 NM_133906 74570 Mm.213114 NM_029869 ENSMUSG00000029729 Zkscan1 5930429A01Rik|9130423L19Rik|9230118B16Rik|AI646829|AI788588|C87323|KOX18|PHZ-37|ZNF139 zinc finger with KRAB and SCAN domains 1 protein-coding common_peak1_69_399_0.264201835935165_8.77595710774231_1.92415431375241 chr15 76904045 76905106 + 1.92415431375241 NA exon (NM_012053, exon 3 of 6) exon (NM_012053, exon 3 of 6) 504 NM_012053 26961 Mm.30066 NM_012053 ENSMUSG00000003970 Rpl8 - ribosomal protein L8 protein-coding common_peak2_53_425_-0.285889742199886_8.59176474912589_1.92411235116276 chr1 66700610 66701891 + 1.92411235116276 NA intron (NM_025683, intron 1 of 5) CpG 419 NM_001310644 66646 Mm.240912 NM_025683 ENSMUSG00000026005 Rpe 2810429B02Rik|5730518J08Rik ribulose-5-phosphate-3-epimerase protein-coding common_peak2_53_425_-0.285889742199886_8.59176474912589_1.92411235116276-2 chr4 126467444 126469207 + 1.92411235116276 NA promoter-TSS (NM_153403) promoter-TSS (NM_153403) 96 NM_153403 236511 Mm.30800 NM_153403 ENSMUSG00000041530 Ago1 Eif2c1 argonaute RISC catalytic subunit 1 protein-coding common_peak2_122_843_0.184478592511525_9.81333848496295_1.9236463367167 chr11 75253993 75256085 + 1.9236463367167 NA intron (NM_177708, intron 1 of 1) intron (NM_177708, intron 1 of 1) 61046 NM_177708 237847 Mm.82661 NM_177708 ENSMUSG00000045287 Rtn4rl1 Ngr3|Ngrh2|Ngrl2 reticulon 4 receptor-like 1 protein-coding common_peak1_419_4584_-0.0839011654328861_12.120755435766_1.92350019865319 chr10 127665400 127669583 + 1.92350019865319 NA promoter-TSS (NM_001122895) promoter-TSS (NM_001122895) 368 NR_045171 72243 Mm.482902 NR_045171 ENSMUSG00000040195 1700012D01Rik - RIKEN cDNA 1700012D01 gene ncRNA unique_peak2_12_95_-0.656153567266579_6.25688571708787_1.92313441404633 chr9 79756289 79756984 + 1.92313441404633 NA intron (NM_009945, intron 2 of 3) intron (NM_009945, intron 2 of 3) 3217 NM_009945 12866 Mm.152627 NM_009945 ENSMUSG00000032330 Cox7a2 COX7AL|Cox7a3|CoxVIIa-L cytochrome c oxidase subunit VIIa 2 protein-coding common_peak2_329_3441_-0.0969935363146472_11.7005346138829_1.92297539865126 chr1 178405110 178407434 + 1.92297539865126 NA intron (NM_026626, intron 1 of 6) CpG 391 NM_026626 68226 Mm.252132 NM_026626 ENSMUSG00000026495 Efcab2 1700073K01Rik|D830011E08Rik EF-hand calcium binding domain 2 protein-coding common_peak1_117_799_0.188282526453456_9.73799745300145_1.92275547930749 chr12 87471237 87472423 + 1.92275547930749 NA intron (NM_025507, intron 1 of 13) intron (NM_025507, intron 1 of 13) 469 NM_025507 66354 Mm.271174 NM_025507 ENSMUSG00000021039 Snw1 2310008B08Rik|AW048543|NCoA-62|SKIP|Skiip SNW domain containing 1 protein-coding common_peak1_105_912_-0.192116973354754_9.73841256330685_1.92275547930749 chr2 150135198 150137188 + 1.92275547930749 NA intron (NM_181266, intron 1 of 3) intron (NM_181266, intron 1 of 3) 485 NM_023266 104348 Mm.485851 NM_023266 ENSMUSG00000068134 Zfp120 AI315103|E030042N05Rik|F80|MZF31|Zfp844 zinc finger protein 120 protein-coding common_peak1_105_912_-0.192116973354754_9.73841256330685_1.92275547930749-2 chr9 13246817 13247831 + 1.92275547930749 NA intron (NM_025534, intron 1 of 8) intron (NM_025534, intron 1 of 8) 345 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding unique_peak2_25_193_-0.444491597546196_7.37766704341403_1.92272533177824 chr6 143171264 143172588 + 1.92272533177824 NA intron (NM_029250, intron 1 of 7) intron (NM_029250, intron 1 of 7) 4696 NM_029250 75320 Mm.272548 NM_029250 ENSMUSG00000030275 Etnk1 1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1 ethanolamine kinase 1 protein-coding common_peak1_37_289_-0.352932575431688_8.00344280229909_1.92260785811843-2 chr7 127254256 127254758 + 1.92260785811843 NA exon (NM_177362, exon 3 of 3) exon (NM_177362, exon 3 of 3) 6160 NM_023203 66422 Mm.29898 NM_023203 ENSMUSG00000042462 Dctpp1 2410015N17Rik|AI854235|RS21-C6 dCTP pyrophosphatase 1 protein-coding common_peak1_37_289_-0.352932575431688_8.00344280229909_1.92260785811843 chr11 49090874 49091636 + 1.92260785811843 NA intron (NM_010999, intron 2 of 5) RMER12B|LTR|ERVK 4238 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak1_65_369_0.272550798330924_8.66765685968177_1.92252886699075 chr5 144014368 144014974 + 1.92252886699075 NA intron (NM_177682, intron 1 of 14) CpG 182 NM_177682 231874 Mm.320432 NM_177682 ENSMUSG00000029617 Ccz1 AU022870 CCZ1 vacuolar protein trafficking and biogenesis associated protein-coding common_peak2_142_1289_-0.160965003728188_10.2526728484465_1.92179343314903 chr8 69624524 69626180 + 1.92179343314903 NA promoter-TSS (NM_001045553) promoter-TSS (NM_001045553) -177 NM_001045553 234362 Mm.458487 NM_172754 ENSMUSG00000060427 Zfp868 AI449175|AW108241|C530032E20|mszf62 zinc finger protein 868 protein-coding common_peak1_109_728_0.198128325245335_9.6088391669496_1.92176028897042 chr13 86046163 86046854 + 1.92176028897042 NA intron (NM_007749, intron 1 of 2) CpG 287 NM_007749 12867 Mm.378898 NM_007749 ENSMUSG00000017778 Cox7c COXVIIc|Cox7c1 cytochrome c oxidase subunit VIIc protein-coding common_peak1_118_1042_-0.179451072280122_9.93679790637971_1.92164594051709 chr6 83775236 83776416 + 1.92164594051709 NA promoter-TSS (NM_009357) promoter-TSS (NM_009357) -14 NM_009357 21766 Mm.28371 NM_009357 ENSMUSG00000014748 Tex261 3110001O07Rik|AA409339|AI480706|AL033351|TEG-261 testis expressed gene 261 protein-coding common_peak1_19_146_-0.508538117205588_6.94540328623357_1.92161257831753 chr6 129284056 129284447 + 1.92161257831753 NA Intergenic B1_Mur3|SINE|Alu -8882 NM_001033122 12515 Mm.74745 NM_001033122 ENSMUSG00000030156 Cd69 5830438K24Rik|AI452015|AIM|VEA CD69 antigen protein-coding unique_peak1_11_30_0.832966846518865_5.37067973364631_1.92155650516079 chr13 33049466 33049762 + 1.92155650516079 NA Intergenic RMER17A-int|LTR|ERVK 22200 NM_011452 20706 Mm.45371 NM_011452 ENSMUSG00000021403 Serpinb9b 1600019A21Rik|R86|SPI-CI|Spi10|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9b protein-coding unique_peak1_11_30_0.832966846518865_5.37067973364631_1.92155650516079-2 chr14 105328486 105328862 + 1.92155650516079 NA Intergenic Intergenic 70001 NM_001190989 76273 Mm.290669 NM_029561 ENSMUSG00000053253 Ndfip2 0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165 Nedd4 family interacting protein 2 protein-coding common_peak1_83_510_0.23351978523359_9.11393937355442_1.92138317863691 chr7 75371378 75372889 + 1.92138317863691 NA Intergenic Intergenic -62871 NM_153579 64176 Mm.273082 NM_153579 ENSMUSG00000053025 Sv2b A830038F04Rik|AI850768|mKIAA0735 synaptic vesicle glycoprotein 2 b protein-coding common_peak2_123_1093_-0.175490195685539_10.0076519249498_1.92123915426881 chr3 94974128 94975652 + 1.92123915426881 NA 5' UTR (NM_175356, exon 1 of 11) 5' UTR (NM_175356, exon 1 of 11) 159 NM_001293716 107650 Mm.217222 NM_175356 ENSMUSG00000038861 Pi4kb ESTM41|PI4K-beta|PI4Kbeta|Pik4cb phosphatidylinositol 4-kinase, catalytic, beta polypeptide protein-coding common_peak1_98_634_0.210841682154635_9.41603362273685_1.92055728812384 chr1 167307955 167309201 + 1.92055728812384 NA promoter-TSS (NM_001039483) promoter-TSS (NM_001039483) -92 NM_001039483 68944 Mm.330045 NM_026881 ENSMUSG00000052428 Tmco1 1190006A08Rik|4930403O06Rik|AA109065|AU022572|ESTM39 transmembrane and coiled-coil domains 1 protein-coding common_peak2_35_272_-0.361459467860829_7.91202740698944_1.92033727533252 chrX 72917696 72919090 + 1.92033727533252 NA promoter-TSS (NM_010941) promoter-TSS (NM_010941) -49 NM_019405 26370 Mm.24643 NM_019405 ENSMUSG00000031347 Cetn2 1110034A02Rik|AI326150|Calt|caltractin centrin 2 protein-coding common_peak2_43_212_0.351700433654469_7.91055983705307_1.92033727533252 chr3 85194963 85195875 + 1.92033727533252 NA Intergenic Intergenic -122100 NR_040542 73283 Mm.489084 NR_040542 ENSMUSG00000099995 1700036G14Rik - RIKEN cDNA 1700036G14 gene ncRNA common_peak1_27_208_-0.420794382062957_7.4969619410494_1.91965578464725-2 chr12 110888483 110889159 + 1.91965578464725 NA promoter-TSS (NM_175336) promoter-TSS (NM_175336) 324 NM_027223 67236 Mm.287157 NM_026048 ENSMUSG00000021276 Cinp 1810047K05Rik|2810452K22Rik cyclin-dependent kinase 2 interacting protein protein-coding common_peak1_27_208_-0.420794382062957_7.4969619410494_1.91965578464725 chr1 181247537 181248095 + 1.91965578464725 NA Intergenic Intergenic -35838 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak1_58_470_-0.274056844570959_8.7425548273273_1.91934816734135 chr10 112001468 112002634 + 1.91934816734135 NA Intergenic Intergenic -4787 NM_028608 73690 Mm.173790 NM_028608 ENSMUSG00000056888 Glipr1 2410114O14Rik|RTVP-1|RTVP1|mRTVP-1 GLI pathogenesis-related 1 (glioma) protein-coding common_peak2_58_470_-0.274056844570959_8.7425548273273_1.91934816734135 chr12 21461733 21464105 + 1.91934816734135 NA Intergenic Intergenic -45483 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_130_1164_-0.16902697769477_10.1016007506943_1.91909833685973 chr8 109608164 109609437 + 1.91909833685973 NA promoter-TSS (NM_020046) promoter-TSS (NM_020046) -127 NM_020046 56749 Mm.23894 NM_020046 ENSMUSG00000031730 Dhodh 2810417D19Rik|AI834883 dihydroorotate dehydrogenase protein-coding common_peak2_76_454_0.246998805687008_8.95322213792956_1.9187670962603 chr7 30308047 30309499 + 1.9187670962603 NA promoter-TSS (NM_198027) promoter-TSS (NM_198027) 20 NM_198027 233065 Mm.276277 NM_198027 ENSMUSG00000042831 Alkbh6 AI839550|Abh6|C130099A02 alkB homolog 6 protein-coding common_peak1_50_260_0.319764780557572_8.18778838684867_1.91861256271671-2 chr7 90067507 90068544 + 1.91861256271671 NA Intergenic Intergenic 38866 NR_110364 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15 RIKEN cDNA E230029C05 gene ncRNA common_peak1_50_260_0.319764780557572_8.18778838684867_1.91861256271671 chr6 52698369 52699524 + 1.91861256271671 NA Intergenic Intergenic -14783 NM_025816 52440 Mm.389757 NM_025816 ENSMUSG00000004535 Tax1bp1 1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151 Tax1 (human T cell leukemia virus type I) binding protein 1 protein-coding common_peak2_95_609_0.214334658014559_9.35983276145753_1.91854631823605 chr7 128523478 128524891 + 1.91854631823605 NA intron (NM_013863, intron 1 of 3) CpG 601 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak1_95_609_0.214334658014559_9.35983276145753_1.91854631823605 chr7 28392876 28393820 + 1.91854631823605 NA promoter-TSS (NM_026042) promoter-TSS (NM_026042) 352 NM_019458 54624 Mm.7916 NM_019458 ENSMUSG00000003437 Paf1 5730511K23Rik|AA675045 Paf1, RNA polymerase II complex component protein-coding common_peak2_155_1426_-0.152601547495189_10.4024688457282_1.91747383397028 chr11 61266296 61267971 + 1.91747383397028 NA promoter-TSS (NM_007437) promoter-TSS (NM_007437) 53 NM_007437 11671 Mm.398221 NM_007437 ENSMUSG00000010025 Aldh3a2 AI194803|Ahd-3|Ahd-3r|Ahd3|Ahd3-r|Aldh4|Aldh4-r|FALDH aldehyde dehydrogenase family 3, subfamily A2 protein-coding common_peak1_247_2087_0.11861314172349_11.0872125674316_1.91737727715753 chr8 13286802 13288894 + 1.91737727715753 NA promoter-TSS (NM_172282) promoter-TSS (NM_172282) -165 NM_172282 234076 Mm.219813 NM_172282 ENSMUSG00000038497 Tmco3 B230339H12Rik|C87304 transmembrane and coiled-coil domains 3 protein-coding common_peak2_34_264_-0.368402834927029_7.86564713198705_1.9170129387622 chr11 119862625 119864070 + 1.9170129387622 NA intron (NM_028898, intron 20 of 33) intron (NM_028898, intron 20 of 33) -18942 NR_039557 100628577 NR_039557 ENSMUSG00000093061 Mir5098 mmu-mir-5098|mu-mir-5098 microRNA 5098 ncRNA common_peak1_34_264_-0.368402834927029_7.86564713198705_1.9170129387622 chrX 159678802 159679362 + 1.9170129387622 NA intron (NM_001135727, intron 1 of 17) intron (NM_001135727, intron 1 of 17) -29519 NM_021389 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak2_115_1012_-0.182530521915856_9.89315319784321_1.91626625467487 chr17 56911363 56915429 + 1.91626625467487 NA intron (NM_022328, intron 3 of 11) L1M4|LINE|L1 21992 NM_022328 64144 Mm.148748 NM_022328 ENSMUSG00000024212 Mllt1 AA407901|BAM11|ENL|LTG19 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1 protein-coding common_peak1_46_365_-0.312568750858025_8.35941546285503_1.91621991642952 chr6 142345571 142346171 + 1.91621991642952 NA intron (NM_183165, intron 1 of 11) CpG 174 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding common_peak2_46_365_-0.312568750858025_8.35941546285503_1.91621991642952 chr10 98877276 98879280 + 1.91621991642952 NA Intergenic Intergenic -36874 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak2_171_1304_0.149117701169416_10.424392942042_1.91587761475947 chr4 45319522 45321291 + 1.91587761475947 NA exon (NM_025513, exon 1 of 4) exon (NM_025513, exon 1 of 4) 197 NM_025513 66362 Mm.275788 NM_025513 ENSMUSG00000028322 Exosc3 2310005D06Rik|AI593501|Rrp40 exosome component 3 protein-coding common_peak1_87_737_-0.214454640993733_9.42024968556353_1.9158305207578 chr2 122651558 122653096 + 1.9158305207578 NA Intergenic Intergenic 11524 NR_030547 387165 NR_030547 ENSMUSG00000076309 Mir147 Mirn147|mmu-mir-147 microRNA 147 ncRNA common_peak1_28_216_-0.412887917931911_7.55510727347852_1.91572754085978-2 chr2 167976098 167976660 + 1.91572754085978 NA intron (NM_011201, intron 8 of 8) intron (NM_011201, intron 8 of 8) 34214 NM_001080708 69553 Mm.68454 NM_001080708 ENSMUSG00000074577 Fam65c 2310033K02Rik|Gm124 family with sequence similarity 65, member C protein-coding common_peak1_28_216_-0.412887917931911_7.55510727347852_1.91572754085978 chr12 28800175 28800766 + 1.91572754085978 NA intron (NM_201357, intron 3 of 8) intron (NM_201357, intron 3 of 8) 48642 NM_201357 380752 Mm.273724 NM_201357 ENSMUSG00000036613 Tssc1 D12Ertd604e|Eipr1 tumor suppressing subtransferable candidate 1 protein-coding common_peak1_57_460_-0.273347314730414_8.71194928306413_1.91484218896292 chr17 34203325 34204281 + 1.91484218896292 NA promoter-TSS (NM_011530) promoter-TSS (NM_011530) -676 NM_011530 21355 Mm.14814 NM_011530 ENSMUSG00000024339 Tap2 ABC18|AI462429|APT2|Abcb3|Ham-2|Ham2|MTP2|PSF2|RING11|Tap-2|Y1|jas transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) protein-coding common_peak2_72_423_0.25439857182243_8.85511974047441_1.91343458799069 chr2 103641088 103643478 + 1.91343458799069 NA intron (NM_178890, intron 1 of 16) Tigger7|DNA|TcMar-Tigger 75973 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_29_224_-0.405124758619334_7.61121881190737_1.91320962915548 chr9 124051060 124052109 + 1.91320962915548 NA Intergenic Intergenic 29613 NM_009914 12771 Mm.57050 NM_009914 ENSMUSG00000035448 Ccr3 CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3 chemokine (C-C motif) receptor 3 protein-coding unique_peak2_29_224_-0.405124758619334_7.61121881190737_1.91320962915548 chr3 129493690 129494944 + 1.91320962915548 NA Intergenic ID_B1|SINE|B4 -38069 NM_130450 170439 Mm.314113 NM_130450 ENSMUSG00000041220 Elovl6 C77826|FAE|LCE ELOVL family member 6, elongation of long chain fatty acids (yeast) protein-coding common_peak2_32_248_-0.382681984407201_7.76866093986448_1.91266369507804 chrX 100625309 100626029 + 1.91266369507804 NA promoter-TSS (NM_008446) promoter-TSS (NM_008446) 238 NM_028303 72621 Mm.291607 NM_028303 ENSMUSG00000015668 Pdzd11 1810012H22Rik|2310079D11Rik|2700099C19Rik|AI854765|Pdzk11 PDZ domain containing 11 protein-coding unique_peak2_32_248_-0.382681984407201_7.76866093986448_1.91266369507804 chr6 31803470 31804597 + 1.91266369507804 NA Intergenic IAPEz-int|LTR|ERVK -240096 NM_013723 27205 Mm.89918 NM_013723 ENSMUSG00000025608 Podxl AW121214|Ly102|PC|PCLP-1|Pclp1 podocalyxin-like protein-coding common_peak1_77_643_-0.2313611173204_9.21523631945442_1.91236107867744 chr17 47511336 47512352 + 1.91236107867744 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 6793 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak2_77_643_-0.2313611173204_9.21523631945442_1.91236107867744 chr4 40142193 40144166 + 1.91236107867744 NA promoter-TSS (NM_007386) promoter-TSS (NM_007386) -86 NM_007386 11428 Mm.331547 NM_007386 ENSMUSG00000028405 Aco1 Aco-1|Irebp|Irp1 aconitase 1 protein-coding common_peak1_161_1490_-0.149110148104208_10.4675094682313_1.91214581852076 chr7 72274531 72276458 + 1.91214581852076 NA intron (NM_001024703, intron 1 of 22) intron (NM_001024703, intron 1 of 22) 31101 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak1_45_356_-0.314707148749234_8.32242668965448_1.91196525832837 chr9 57646908 57647600 + 1.91196525832837 NA intron (NM_001304761, intron 2 of 14) intron (NM_001304761, intron 2 of 14) -1601 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding unique_peak2_45_356_-0.314707148749234_8.32242668965448_1.91196525832837 chr8 48424481 48427015 + 1.91196525832837 NA intron (NM_011857, intron 2 of 28) intron (NM_011857, intron 2 of 28) 248942 NM_001145937 23965 Mm.42191 NM_011857 ENSMUSG00000031561 Tenm3 2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455 teneurin transmembrane protein 3 protein-coding common_peak1_31_240_-0.390023761918438_7.71787745527074_1.91180240641368-2 chr2 35993834 35994495 + 1.91180240641368 NA Intergenic Intergenic -14540 NM_029774 74410 Mm.21591 NM_028921 ENSMUSG00000026885 Ttll11 4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e tubulin tyrosine ligase-like family, member 11 protein-coding common_peak1_31_240_-0.390023761918438_7.71787745527074_1.91180240641368-5 chr7 4611965 4612671 + 1.91180240641368 NA Intergenic Intergenic -8277 NM_207270 545902 Mm.188925 NM_207270 ENSMUSG00000035429 Ptprh R-PTP-H|sap-1 protein tyrosine phosphatase, receptor type, H protein-coding common_peak1_31_240_-0.390023761918438_7.71787745527074_1.91180240641368-3 chr2 72996731 72997435 + 1.91180240641368 NA Intergenic Intergenic -16637 NM_001018042 20687 Mm.124328 NM_011450 ENSMUSG00000027109 Sp3 D130027J01Rik trans-acting transcription factor 3 protein-coding common_peak1_31_240_-0.390023761918438_7.71787745527074_1.91180240641368-4 chr5 75067099 75067644 + 1.91180240641368 NA Intergenic Intergenic -8230 NM_133256 14843 Mm.218752 NM_133256 ENSMUSG00000035946 Gsx2 Gsh-2|Gsh2 GS homeobox 2 protein-coding common_peak1_31_240_-0.390023761918438_7.71787745527074_1.91180240641368 chr13 59585341 59585976 + 1.91180240641368 NA promoter-TSS (NR_045633) promoter-TSS (NR_045633) 325 NM_030153 78689 Mm.253902 NM_030153 ENSMUSG00000021555 Naa35 A330021G12Rik|A330027C19Rik|AI158944|C030004C14Rik|Mak10 N(alpha)-acetyltransferase 35, NatC auxiliary subunit protein-coding common_peak1_332_3038_0.0986717239956825_11.6187168215201_1.91152150162658 chr1 86526685 86530067 + 1.91152150162658 NA intron (NM_008972, intron 1 of 4) CpG-365 1640 NM_008972 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak1_140_1008_0.168555144472945_10.0629880313428_1.91140370772197 chr9 107974877 107976452 + 1.91140370772197 NA promoter-TSS (NM_023738) promoter-TSS (NM_023738) 97 NM_023738 74153 Mm.277125 NM_023738 ENSMUSG00000032596 Uba7 1300004C08Rik|Ube1l ubiquitin-like modifier activating enzyme 7 protein-coding common_peak1_49_253_0.323942816550575_8.15065609504745_1.91125572394956 chr1 21331144 21332285 + 1.91125572394956 NA Intergenic Intergenic -17963 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_15_117_-0.586389786236674_6.5894481562435_1.9110051961808 chr1 40394342 40394789 + 1.9110051961808 NA Intergenic Intergenic -35005 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_15_117_-0.586389786236674_6.5894481562435_1.9110051961808-2 chr15 97820913 97821363 + 1.9110051961808 NA intron (NM_001204275, intron 1 of 24) CYRA11_Mm|Unknown|Y-chromosome -6275 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding unique_peak2_15_117_-0.586389786236674_6.5894481562435_1.9110051961808 chr12 100505525 100506331 + 1.9110051961808 NA intron (NM_001033213, intron 1 of 19) GA-rich|Low_complexity|Low_complexity 14894 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding unique_peak2_15_117_-0.586389786236674_6.5894481562435_1.9110051961808-2 chr3 89101342 89102021 + 1.9110051961808 NA intron (NM_001253751, intron 1 of 10) CpG 286 NM_134469 110196 Mm.39472 NM_134469 ENSMUSG00000059743 Fdps 6030492I17Rik|AI256750|Fdpsl1|mKIAA1293 farnesyl diphosphate synthetase protein-coding common_peak2_64_362_0.273088782337146_8.64037012916432_1.91083805833576 chr4 101246396 101248928 + 1.91083805833576 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 17620 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_519_5337_0.0746678637499976_12.419417522017_1.91064522473264 chr7 28787991 28797650 + 1.91064522473264 NA intron (NM_177158, intron 4 of 11) intron (NM_177158, intron 4 of 11) 3851 NM_177158 320435 Mm.74632 NM_177158 ENSMUSG00000051735 Rinl 5830482F20Rik|9930116N10Rik Ras and Rab interactor-like protein-coding common_peak2_661_7228_0.0644241806934218_12.8517924655017_1.91006875049132 chr19 53394001 53401213 + 1.91006875049132 NA Intergenic Intergenic -7034 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak2_162_1217_0.153546026015038_10.3270714309139_1.90963750291935 chr10 80854455 80858886 + 1.90963750291935 NA intron (NM_175195, intron 1 of 14) intron (NM_175195, intron 1 of 14) 1395 NM_175195 73218 Mm.3285 NM_175195 ENSMUSG00000035206 Sppl2b 3110056O03Rik|AW550292|PSL1 signal peptide peptidase like 2B protein-coding common_peak2_108_720_0.197886786288814_9.59279884238523_1.90937182539095 chr1 36690761 36692418 + 1.90937182539095 NA exon (NM_009942, exon 1 of 4) exon (NM_009942, exon 1 of 4) 102 NM_009942 12859 Mm.180182 NM_009942 ENSMUSG00000061518 Cox5b - cytochrome c oxidase subunit Vb protein-coding common_peak1_85_526_0.230680329803091_9.15699931653876_1.90935208619913 chr2 37430517 37431440 + 1.90935208619913 NA promoter-TSS (NM_146253) promoter-TSS (NM_146253) -59 NM_146253 241322 Mm.330182 NM_146253 ENSMUSG00000066798 Zbtb6 A830092L04Rik|ZID|Zfp482 zinc finger and BTB domain containing 6 protein-coding common_peak2_85_526_0.230680329803091_9.15699931653876_1.90935208619913 chr10 117147822 117149264 + 1.90935208619913 NA promoter-TSS (NM_177798) promoter-TSS (NM_177798) -69 NM_177798 327826 Mm.135965 NM_177798 ENSMUSG00000020170 Frs2 4732458E18|C330018A15Rik|Frs2alpha|SNT1 fibroblast growth factor receptor substrate 2 protein-coding unique_peak2_10_81_-0.724366573110488_5.99536871806284_1.909206442712-3 chrX 134584964 134585603 + 1.909206442712 NA promoter-TSS (NM_019865) promoter-TSS (NM_019865) -371 NM_019865 19982 Mm.286408 NM_019865 ENSMUSG00000079435 Rpl36a L44L|Rpl44 ribosomal protein L36A protein-coding unique_peak2_10_81_-0.724366573110488_5.99536871806284_1.909206442712 chr2 9519579 9520274 + 1.909206442712 NA Intergenic B4A|SINE|B4 330411 NR_038180 73438 Mm.23558 NR_038180 ENSMUSG00000085580 1700061F12Rik - RIKEN cDNA 1700061F12 gene ncRNA unique_peak2_10_81_-0.724366573110488_5.99536871806284_1.909206442712-2 chr2 89929732 89930405 + 1.909206442712 NA exon (NM_146978, exon 1 of 1) exon (NM_146978, exon 1 of 1) 257 NM_146978 258980 Mm.223370 NM_146978 ENSMUSG00000049149 Olfr1258 MOR232-3 olfactory receptor 1258 protein-coding common_peak2_109_951_-0.186914433735671_9.80136054644011_1.90917646611089 chr6 35538009 35540163 + 1.90917646611089 NA intron (NM_008098, intron 1 of 3) intron (NM_008098, intron 1 of 3) 802 NM_008098 14489 Mm.182746 NM_008098 ENSMUSG00000029840 Mtpn 5033418D15Rik|Gcdp|V1 myotrophin protein-coding common_peak2_167_1554_-0.145387287660398_10.5300052211878_1.90858978646817 chr12 69421704 69424027 + 1.90858978646817 NA Intergenic Intergenic 50715 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak2_142_1027_0.166565797388548_10.0889074478882_1.90779286401487 chr8 27041928 27043840 + 1.90779286401487 NA intron (NM_054057, intron 1 of 7) CpG 329 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Prosc 1700024N20Rik|2200002F22Rik proline synthetase co-transcribed protein-coding common_peak1_263_2642_-0.110803828421622_11.3125587954308_1.90702869623073 chr1 151343644 151345788 + 1.90702869623073 NA 5' UTR (NM_001039511, exon 1 of 8) 5' UTR (NM_001039511, exon 1 of 8) 218 NM_001039511 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak2_94_601_0.21485011351551_9.34104473351746_1.90676987982912 chr2 180919957 180921629 + 1.90676987982912 NA 5' UTR (NM_173761, exon 1 of 5) 5' UTR (NM_173761, exon 1 of 5) 143 NM_173761 228994 Mm.30205 NM_173761 ENSMUSG00000038848 Ythdf1 2210410K23Rik|8030473O16 YTH domain family 1 protein-coding common_peak2_56_451_-0.275680242865015_8.68233884098268_1.90673863596156-2 chr5 88675053 88676416 + 1.90673863596156 NA promoter-TSS (NM_001098476) promoter-TSS (NM_001098476) -154 NM_001098476 231413 Mm.332474 NM_178700 ENSMUSG00000044221 Grsf1 BB232551|C80280|D5Wsu31e G-rich RNA sequence binding factor 1 protein-coding common_peak2_56_451_-0.275680242865015_8.68233884098268_1.90673863596156 chr2 174463343 174464394 + 1.90673863596156 NA intron (NM_025983, intron 1 of 2) CpG 233 NM_025983 67126 Mm.20841 NM_025983 ENSMUSG00000016252 Atp5e 2410043G19Rik|ATPE|AV000645 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit protein-coding common_peak1_22_84_0.529069867955808_6.67392587011561_1.90616632477011 chr11 107441976 107442596 + 1.90616632477011 NA intron (NM_145823, intron 1 of 9) MTE2a|LTR|ERVL-MaLR 28434 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_22_84_0.529069867955808_6.67392587011561_1.90616632477011-2 chr17 47294249 47294546 + 1.90616632477011 NA intron (NM_001097623, intron 5 of 19) intron (NM_001097623, intron 5 of 19) 64167 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak1_22_84_0.529069867955808_6.67392587011561_1.90616632477011-3 chr6 114679729 114680228 + 1.90616632477011 NA intron (NM_028835, intron 4 of 18) intron (NM_028835, intron 4 of 18) 36881 NM_001253717 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding common_peak1_22_84_0.529069867955808_6.67392587011561_1.90616632477011-4 chr8 122576159 122576656 + 1.90616632477011 NA intron (NM_009698, intron 2 of 4) intron (NM_009698, intron 2 of 4) 500 NM_009698 11821 Mm.1786 NM_009698 ENSMUSG00000006589 Aprt C85684 adenine phosphoribosyl transferase protein-coding common_peak2_91_576_0.219257917820741_9.28205646755585_1.90616401593944 chr2 27486388 27488955 + 1.90616401593944 NA Intergenic Intergenic -11998 NM_001113574 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding common_peak2_95_814_-0.203656158653633_9.56882816979162_1.90539441501825 chr6 136470042 136472814 + 1.90539441501825 NA Intergenic Intergenic -47423 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_209_2018_-0.127232653468297_10.9158088685973_1.9053532710448 chr7 58823254 58826096 + 1.9053532710448 NA intron (NM_009728, intron 17 of 20) intron (NM_009728, intron 17 of 20) 166473 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_48_246_0.328509005326007_8.11262173424768_1.9042849012694 chr2 103657961 103658586 + 1.9042849012694 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 91963 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_158_1457_-0.149898722730539_10.4348256429617_1.90421187088923 chr11 106686894 106690307 + 1.90421187088923 NA intron (NM_001305158, intron 6 of 14) intron (NM_001305158, intron 6 of 14) 26681 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak1_71_415_0.257470266104287_8.82917485119324_1.90417882168398 chr12 73711155 73712015 + 1.90417882168398 NA intron (NM_001313977, intron 10 of 14) intron (NM_001313977, intron 10 of 14) 126789 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_23_89_0.52192237176242_6.75281428221088_1.90383666460838 chr2 91957922 91958536 + 1.90383666460838 NA intron (NM_138306, intron 1 of 30) intron (NM_138306, intron 1 of 30) 5334 NM_138306 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak1_23_89_0.52192237176242_6.75281428221088_1.90383666460838-2 chr6 142757761 142758235 + 1.90383666460838 NA intron (NM_009908, intron 1 of 7) intron (NM_009908, intron 1 of 7) 1312 NM_009908 12764 Mm.3820 NM_009908 ENSMUSG00000030282 Cmas AW208911|CMPNeu5Ac|D6Bwg0250e cytidine monophospho-N-acetylneuraminic acid synthetase protein-coding common_peak1_76_633_-0.231617489366341_9.19253028545624_1.90382544338674 chr2 122738281 122739130 + 1.90382544338674 NA intron (NM_019788, intron 1 of 4) CpG 200 NM_019788 18457 Mm.268921 NM_019788 ENSMUSG00000005804 Bloc1s6 BLOC-1|Pldn|Stx13bp1|pa biogenesis of lysosomal organelles complex-1, subunit 6, pallidin protein-coding common_peak2_76_633_-0.231617489366341_9.19253028545624_1.90382544338674 chr3 88491999 88493774 + 1.90382544338674 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) 426 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_78_470_0.242515841500532_9.00084117036305_1.9033269097222 chr5 96911093 96912347 + 1.9033269097222 NA Intergenic Intergenic -9552 NR_131152 666266 Mm.32442 NR_131152 ENSMUSG00000106357 Gm8013 EG666266 predicted gene 8013 ncRNA common_peak2_78_470_0.242515841500532_9.00084117036305_1.9033269097222 chr11 113750831 113752570 + 1.9033269097222 NA promoter-TSS (NM_020006) promoter-TSS (NM_020006) 115 NM_001163346 56699 Mm.293378 NM_020006 ENSMUSG00000041598 Cdc42ep4 1500041M20Rik|Borg4|CEP4 CDC42 effector protein (Rho GTPase binding) 4 protein-coding common_peak1_174_1334_0.146927274826938_10.4560876639884_1.90299843214654 chr7 66262069 66264114 + 1.90299843214654 NA intron (NM_146191, intron 31 of 33) intron (NM_146191, intron 31 of 33) 118633 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_187_1772_-0.135621111099958_10.7241662653487_1.90257538232729 chr9 96349496 96353554 + 1.90257538232729 NA intron (NM_007502, intron 1 of 6) intron (NM_007502, intron 1 of 6) 12774 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak1_111_971_-0.185023131215143_9.83230093799821_1.90229055129453 chr12 112941496 112942693 + 1.90229055129453 NA promoter-TSS (NM_001316724) promoter-TSS (NM_001316724) 48 NM_025399 66174 Mm.7070 NM_025399 ENSMUSG00000002804 Nudt14 1110030M18Rik|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding common_peak2_111_971_-0.185023131215143_9.83230093799821_1.90229055129453 chr5 117133026 117134986 + 1.90229055129453 NA intron (NM_001081308, intron 1 of 19) intron (NM_001081308, intron 1 of 19) 418 NM_183306 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding common_peak1_103_892_-0.193870498107579_9.70558111606743_1.90141107309241 chr13 23368482 23369868 + 1.90141107309241 NA promoter-TSS (NM_001111107) promoter-TSS (NM_001111107) 33 NM_001286156 218100 Mm.286454 NM_172586 ENSMUSG00000046351 Zfp322a Znf322|Znf322a zinc finger protein 322A protein-coding common_peak1_17_58_0.622042312510826_6.19366420561725_1.90133568403822 chr10 41889707 41890153 + 1.90133568403822 NA intron (NM_001013370, intron 1 of 9) intron (NM_001013370, intron 1 of 9) 2491 NM_001013370 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding common_peak1_17_58_0.622042312510826_6.19366420561725_1.90133568403822-2 chr13 114306022 114306475 + 1.90133568403822 NA intron (NM_010887, intron 4 of 4) intron (NM_010887, intron 4 of 4) 81846 NM_010887 17993 Mm.253142 NM_010887 ENSMUSG00000021764 Ndufs4 6720411N02Rik|C1-18k NADH dehydrogenase (ubiquinone) Fe-S protein 4 protein-coding common_peak1_17_58_0.622042312510826_6.19366420561725_1.90133568403822-3 chr3 68691271 68691781 + 1.90133568403822 NA exon (NM_001159424, exon 2 of 8) exon (NM_001159424, exon 2 of 8) 102 NM_008351 16159 Mm.103783 NM_008351 ENSMUSG00000027776 Il12a IL-12p35|Il-12a|Ll12a|p35 interleukin 12a protein-coding common_peak1_116_1021_-0.180101515176476_9.90712872334938_1.90112760046975 chr17 56035726 56036846 + 1.90112760046975 NA intron (NM_013664, intron 1 of 9) CpG 351 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding common_peak1_20_154_-0.49864976147574_7.02679952453637_1.90089853353975-3 chr5 34761225 34761651 + 1.90089853353975 NA promoter-TSS (NM_010414) promoter-TSS (NM_010414) -302 NM_010414 15194 Mm.209071 NM_010414 ENSMUSG00000029104 Htt AI256365|C430023I11Rik|Hd|Hdh|IT15 huntingtin protein-coding common_peak1_20_154_-0.49864976147574_7.02679952453637_1.90089853353975 chr1 74284979 74285461 + 1.90089853353975 NA promoter-TSS (NM_001190444) promoter-TSS (NM_001190444) 186 NM_001039509 56695 Mm.384726 NM_019999 ENSMUSG00000026179 Pnkd 2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2 paroxysmal nonkinesiogenic dyskinesia protein-coding common_peak1_20_154_-0.49864976147574_7.02679952453637_1.90089853353975-2 chr12 105005581 105005932 + 1.90089853353975 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 4053 NM_172500 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak2_50_399_-0.296185412647269_8.49576348345109_1.8998450892406 chr4 118436979 118438295 + 1.8998450892406 NA promoter-TSS (NM_023223) promoter-TSS (NM_023223) -294 NM_023223 107995 Mm.261764 NM_023223 ENSMUSG00000006398 Cdc20 2310042N09Rik|C87100|p55CDC cell division cycle 20 protein-coding common_peak2_79_661_-0.226328556803729_9.25752312840535_1.8998209819044 chrX 42147975 42149147 + 1.8998209819044 NA promoter-TSS (NM_001077712) promoter-TSS (NM_001077712) -851 NM_001077712 20843 Mm.290422 NM_021465 ENSMUSG00000025862 Stag2 9230105L23Rik|B230112I07Rik|SA-2|SAP2 stromal antigen 2 protein-coding common_peak2_192_1514_0.137703214085946_10.6339536854033_1.89963468392873 chr9 44866298 44870742 + 1.89963468392873 NA intron (NM_001081049, intron 1 of 35) intron (NM_001081049, intron 1 of 35) 12754 NM_001081049 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak2_43_339_-0.322980882257395_8.24790049500901_1.89961747630259 chr10 80226059 80227600 + 1.89961747630259 NA intron (NM_023431, intron 1 of 13) CpG 231 NM_023431 68114 Mm.273418 NM_023431 ENSMUSG00000020156 Mum1 2610019J09|9430059D04Rik|UBE-1C2 melanoma associated antigen (mutated) 1 protein-coding common_peak2_108_941_-0.187841014083148_9.78566274257121_1.89831749755536 chr6 83789956 83792893 + 1.89831749755536 NA Intergenic Intergenic -3633 NM_019542 56174 Mm.190650 NM_019542 ENSMUSG00000034744 Nagk Gnk N-acetylglucosamine kinase protein-coding common_peak2_53_281_0.309268525627157_8.29418561521237_1.89793101029689 chr5 62722896 62724557 + 1.89793101029689 NA intron (NM_178407, intron 6 of 32) intron (NM_178407, intron 6 of 32) 42451 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_82_689_-0.220946682497184_9.31997921041694_1.89751351260345 chr16 44745340 44746634 + 1.89751351260345 NA intron (NM_001159329, intron 1 of 5) CpG 376 NM_001159329 66067 Mm.34520 NM_025332 ENSMUSG00000022668 Gtpbp8 0610037H22Rik GTP-binding protein 8 (putative) protein-coding common_peak2_163_1227_0.15257304206796_10.3383813664042_1.89721361337948 chr15 79927021 79929387 + 1.89721361337948 NA intron (NM_144811, intron 2 of 6) intron (NM_144811, intron 2 of 6) 4442 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak2_423_4127_0.0843514435789263_12.0534029772127_1.8971798192508 chr11 23254682 23258738 + 1.8971798192508 NA 5' UTR (NM_134014, exon 2 of 26) 5' UTR (NM_134014, exon 2 of 26) 669 NM_134014 103573 Mm.217547 NM_134014 ENSMUSG00000020290 Xpo1 AA420417|Crm1|Exp1 exportin 1 protein-coding common_peak2_352_3272_0.0948693236151996_11.7238325488524_1.89708001339215 chr17 36270450 36272768 + 1.89708001339215 NA promoter-TSS (NM_178281) promoter-TSS (NM_178281) -176 NM_178281 79263 Mm.40624 NM_024468 ENSMUSG00000045409 Trim39 1100001D15Rik|E130103K13Rik|RBCC-B30.2|Rnf23|mKIAA4179|tfp tripartite motif-containing 39 protein-coding common_peak2_107_712_0.197673922768418_9.5765952278281_1.89699208321274 chr13 64128637 64130350 + 1.89699208321274 NA promoter-TSS (NM_001001321) promoter-TSS (NM_001001321) -163 NM_001001321 70484 Mm.133731 NM_001001321 ENSMUSG00000033114 Slc35d2 5730408I21Rik|SQV7L|UGTrel8|hfrc|mUGTrel8 solute carrier family 35, member D2 protein-coding common_peak1_97_833_-0.200415025347622_9.60369606077085_1.89697245652871 chr1 171294369 171295059 + 1.89697245652871 NA exon (NM_025388, exon 2 of 7) exon (NM_025388, exon 2 of 7) 268 NM_025388 66155 Mm.2815 NM_025388 ENSMUSG00000062963 Ufc1 1110021H02Rik|AA062310|ESTM29 ubiquitin-fold modifier conjugating enzyme 1 protein-coding common_peak1_42_330_-0.324960236553267_8.20820728853058_1.89673595457806 chr2 90487556 90488146 + 1.89673595457806 NA intron (NM_008982, intron 1 of 23) B4A|SINE|B4 -8677 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_96_618_0.211542764149145_9.37956698128884_1.89669671548659 chr14 79397386 79398614 + 1.89669671548659 NA 5' UTR (NM_145960, exon 1 of 11) 5' UTR (NM_145960, exon 1 of 11) 228 NM_145960 211253 Mm.35306 NM_145960 ENSMUSG00000022022 Mtrf1 A830062K05Rik|MtRF-1 mitochondrial translational release factor 1 protein-coding common_peak2_39_186_0.370852078929496_7.73232049935238_1.89666119400713 chr8 70658892 70660093 + 1.89666119400713 NA intron (NM_023217, intron 1 of 4) CpG 246 NM_023217 66522 Mm.154906 NM_023217 ENSMUSG00000056204 Pgpep1 2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding common_peak1_38_179_0.381090353278186_7.68239827296877_1.89625005016888 chr14 76414696 76415479 + 1.89625005016888 NA promoter-TSS (NM_207652) promoter-TSS (NM_207652) 126 NM_001310646 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak2_38_179_0.381090353278186_7.68239827296877_1.89625005016888 chr2 91834122 91835177 + 1.89625005016888 NA intron (NM_001080754, intron 12 of 18) MER5A|DNA|hAT-Charlie -87540 NM_007699 12672 Mm.330405 NM_007699 ENSMUSG00000040495 Chrm4 Chrm-4|M4 cholinergic receptor, muscarinic 4 protein-coding common_peak1_21_161_-0.480052260190673_7.09982387278929_1.89553555518488 chr11 107027572 107028084 + 1.89553555518488 NA promoter-TSS (NM_001163473) promoter-TSS (NM_001163473) -395 NM_001163473 69066 Mm.40679 NM_001163473 ENSMUSG00000078607 1810010H24Rik OTTMUSG00000003581 RIKEN cDNA 1810010H24 gene protein-coding unique_peak2_21_161_-0.480052260190673_7.09982387278929_1.89553555518488 chr5 112384566 112385606 + 1.89553555518488 NA TTS (NM_028386) TTS (NM_028386) 7127 NM_028386 72898 Mm.151745 NM_028386 ENSMUSG00000029348 Asphd2 2900006N09Rik|9230106G13Rik aspartate beta-hydroxylase domain containing 2 protein-coding common_peak1_93_593_0.215424277811609_9.32203125970657_1.89502007723258 chr10 39455136 39456578 + 1.89502007723258 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 86058 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_130_1163_-0.16778808106141_10.1009813023776_1.89462592951293 chr17 84790104 84791578 + 1.89462592951293 NA promoter-TSS (NM_028233) promoter-TSS (NM_028233) -55 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak1_91_775_-0.208227415720904_9.49579913432667_1.89444012675838 chr3 144380672 144382057 + 1.89444012675838 NA Intergenic Intergenic -176109 NM_010723 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak2_169_1285_0.1495792317109_10.4034645431834_1.89418851811671 chr16 24150476 24153498 + 1.89418851811671 NA Intergenic Intergenic -163375 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak2_58_318_0.288113791276956_8.46146950940335_1.89374137679039 chr5 103910553 103911462 + 1.89374137679039 NA intron (NM_178741, intron 1 of 9) CpG 222 NM_178741 246293 Mm.179871 NM_178741 ENSMUSG00000029312 Klhl8 2310001P09Rik|D5Ertd431e kelch-like 8 protein-coding common_peak1_159_1467_-0.148665091653369_10.4453037070165_1.89271353943481 chr9 73044197 73045763 + 1.89271353943481 NA 5' UTR (NM_001301230, exon 1 of 7) 5' UTR (NM_001301230, exon 1 of 7) 170 NM_001301230 11891 Mm.34867 NM_023635 ENSMUSG00000032202 Rab27a 2210402C08Rik|2410003M20Rik|4933437C11Rik|ash RAB27A, member RAS oncogene family protein-coding common_peak2_205_1646_0.132535355236742_10.7518925173447_1.89234940567716 chr4 132746211 132748961 + 1.89234940567716 NA intron (NM_133888, intron 1 of 7) PB1D10|SINE|Alu 9585 NM_133888 100340 Mm.287187 NM_133888 ENSMUSG00000028885 Smpdl3b 1110054A24Rik|AU045240|Asml3b sphingomyelin phosphodiesterase, acid-like 3B protein-coding common_peak2_70_408_0.257202512905268_8.80455828939438_1.89149334782571 chr8 25753561 25755117 + 1.89149334782571 NA promoter-TSS (NM_028102) promoter-TSS (NM_028102) -59 NM_028102 72108 Mm.246875 NM_028102 ENSMUSG00000061313 Ddhd2 2010305K11Rik|SAMWD1|mKIAA0725 DDHD domain containing 2 protein-coding common_peak1_78_651_-0.226629063117761_9.2354136226722_1.89097541099617 chrX 20703679 20704904 + 1.89097541099617 NA intron (NM_145628, intron 1 of 20) CpG 382 NM_145628 236733 Mm.34489 NM_145628 ENSMUSG00000031066 Usp11 6230415D12Rik|mKIAA4085 ubiquitin specific peptidase 11 protein-coding common_peak1_16_124_-0.562248023687915_6.68466027281813_1.8906229380578 chr7 128166624 128167067 + 1.8906229380578 NA Intergenic L1MA4A|LINE|L1 -7101 NM_001029872 381924 Mm.334257 NM_001029872 ENSMUSG00000070369 Itgad Cd11d integrin, alpha D protein-coding common_peak1_24_95_0.501052691415228_6.83548884642877_1.88962567974847 chr11 32546714 32547259 + 1.88962567974847 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 13720 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_181_1404_0.142602938798115_10.5276558845073_1.88961611705972 chr5 67259961 67261524 + 1.88961611705972 NA 5' UTR (NM_030108, exon 1 of 9) 5' UTR (NM_030108, exon 1 of 9) 177 NM_030108 67878 Mm.23217 NM_028975 ENSMUSG00000037720 Tmem33 1110006G02Rik|1600019D15Rik|2410089A21Rik|2700052H22Rik|5430406L04Rik|AA388285|AI314185|AI426615|db83 transmembrane protein 33 protein-coding common_peak1_41_322_-0.33130339970907_8.16973865483939_1.88891246912376 chr5 110285833 110286791 + 1.88891246912376 NA promoter-TSS (NM_008993) promoter-TSS (NM_008993) -7 NM_011132 18973 Mm.35061 NM_011132 ENSMUSG00000007080 Pole - polymerase (DNA directed), epsilon protein-coding common_peak2_37_173_0.384033018734518_7.63496000521599_1.88887715419214 chr2 150450773 150451737 + 1.88887715419214 NA intron (NM_001310645, intron 1 of 3) intron (NM_001310645, intron 1 of 3) 246 NM_001310645 668923 Mm.393876 NM_001177550 ENSMUSG00000068130 Zfp442 OTTMUSG00000015730|ZIPO-II zinc finger protein 442 protein-coding common_peak1_37_173_0.384033018734518_7.63496000521599_1.88887715419214 chr15 60178494 60179357 + 1.88887715419214 NA Intergenic L1_Mus3|LINE|L1 -162307 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_330_3451_-0.0958245045168855_11.7053044969205_1.88875988463075 chr10 68237970 68242689 + 1.88875988463075 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 38397 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_127_1132_-0.169841949136279_10.0610111712524_1.88815456666494 chr4 108327054 108329069 + 1.88815456666494 NA promoter-TSS (NM_027250) promoter-TSS (NM_027250) -91 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding common_peak2_48_381_-0.300552591125063_8.42715253247322_1.88796708493918 chr1 5082629 5083846 + 1.88796708493918 NA 5' UTR (NM_133826, exon 1 of 14) 5' UTR (NM_133826, exon 1 of 14) 151 NM_001310442 108664 Mm.27082 NM_133826 ENSMUSG00000033793 Atp6v1h 0710001F19Rik|AU022349|CGI-11|SFD|SFDalpha|SFDbeta|VMA13 ATPase, H+ transporting, lysosomal V1 subunit H protein-coding common_peak1_48_381_-0.300552591125063_8.42715253247322_1.88796708493918 chr15 64210627 64211609 + 1.88796708493918 NA intron (NM_001276462, intron 1 of 27) intron (NM_001276462, intron 1 of 27) 101555 NM_001276462 13196 Mm.277236 NM_010026 ENSMUSG00000022377 Asap1 AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein-coding common_peak2_119_818_0.184161413329408_9.76980034830571_1.88747103053364 chr14 54863314 54865140 + 1.88747103053364 NA promoter-TSS (NM_001177705) promoter-TSS (NM_001177705) -69 NM_001177705 239099 Mm.280994 NM_183174 ENSMUSG00000057156 Homez mKIAA1443 homeodomain leucine zipper-encoding gene protein-coding common_peak1_40_313_-0.333177483826202_8.12803200697853_1.88709328788561 chr2 119208940 119209555 + 1.88709328788561 NA promoter-TSS (NM_139139) promoter-TSS (NM_139139) -452 NM_139139 69408 Mm.222241 NM_139139 ENSMUSG00000034278 Dnajc17 1700025B16Rik|C87112|D9Bwg1371e DnaJ heat shock protein family (Hsp40) member C17 protein-coding common_peak1_152_1393_-0.153209552587683_10.3684100695746_1.8867618364849 chr10 61146136 61148385 + 1.8867618364849 NA intron (NM_001316674, intron 1 of 14) (CAGCT)n|Simple_repeat|Simple_repeat 424 NM_009163 20397 Mm.412319 NM_009163 ENSMUSG00000020097 Sgpl1 AI428538|D10Xrf456|S1PL|Spl sphingosine phosphate lyase 1 protein-coding common_peak1_13_102_-0.626548088351648_6.37322648300739_1.88647548383687-3 chrX 9027923 9028377 + 1.88647548383687 NA Intergenic Intergenic -5336 NM_031261 83457 Mm.388703 NM_031261 ENSMUSG00000071815 Fthl17e Fthl17 ferritin, heavy polypeptide-like 17, member E protein-coding common_peak1_13_102_-0.626548088351648_6.37322648300739_1.88647548383687-2 chr17 88701995 88702335 + 1.88647548383687 NA intron (NM_023630, intron 6 of 8) intron (NM_023630, intron 6 of 8) 33505 NM_023630 71828 Mm.61330 NM_023630 ENSMUSG00000024154 Gtf2a1l 1700011N16Rik|Alf|Gtf2a1lf general transcription factor IIA, 1-like protein-coding unique_peak2_13_102_-0.626548088351648_6.37322648300739_1.88647548383687-3 chr7 98102828 98103309 + 1.88647548383687 NA intron (NM_001256081, intron 3 of 48) intron (NM_001256081, intron 3 of 48) 6180 NM_001256082 17921 Mm.1403 NM_008663 ENSMUSG00000030761 Myo7a Hdb|Myo7|USH1B|nmf371|polka|sh-1|sh1 myosin VIIA protein-coding unique_peak2_13_102_-0.626548088351648_6.37322648300739_1.88647548383687 chr19 4124921 4125597 + 1.88647548383687 NA promoter-TSS (NM_025889) promoter-TSS (NM_025889) 599 NM_016666 11632 Mm.10433 NM_016666 ENSMUSG00000024847 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2 aryl-hydrocarbon receptor-interacting protein protein-coding unique_peak2_13_102_-0.626548088351648_6.37322648300739_1.88647548383687-2 chr5 136918765 136919485 + 1.88647548383687 NA promoter-TSS (NR_015555) promoter-TSS (NR_015555) -21 NR_015555 66752 Mm.135764 NR_015555 ENSMUSG00000097908 4933404O12Rik AW494809 RIKEN cDNA 4933404O12 gene ncRNA common_peak1_13_102_-0.626548088351648_6.37322648300739_1.88647548383687 chr10 123076582 123076875 + 1.88647548383687 NA promoter-TSS (NM_001163024) promoter-TSS (NM_001163024) -223 NM_001163025 67074 Mm.169924 NM_153395 ENSMUSG00000034602 Mon2 2610528O22Rik|AW495628|Sf21|mKIAA1040 MON2 homolog, regulator of endosome to Golgi trafficking protein-coding common_peak1_207_1994_-0.126914852909708_10.8987156046549_1.88646546083353 chr5 135933788 135935537 + 1.88646546083353 NA promoter-TSS (NM_018871) promoter-TSS (NM_018871) -21 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak2_149_1093_0.161364996683467_10.1760795211343_1.88640041154397 chr4 6473974 6477489 + 1.88640041154397 NA Intergenic Intergenic -21460 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding common_peak2_122_1081_-0.173907002608106_9.99253128252276_1.88629904154744 chr14 105286438 105290588 + 1.88629904154744 NA intron (NM_001190989, intron 2 of 7) intron (NM_001190989, intron 2 of 7) 29840 NM_001190989 76273 Mm.290669 NM_029561 ENSMUSG00000053253 Ndfip2 0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165 Nedd4 family interacting protein 2 protein-coding common_peak2_46_233_0.332766367842613_8.03674790350471_1.88558092101364 chr11 120915758 120917271 + 1.88558092101364 NA intron (NM_027745, intron 3 of 18) intron (NM_027745, intron 3 of 18) 16358 NM_027745 71276 Mm.275751 NM_027745 ENSMUSG00000048445 Ccdc57 4933434G05Rik coiled-coil domain containing 57 protein-coding common_peak2_140_1009_0.167126025940146_10.0637025906092_1.88518876148927 chr4 44232788 44235092 + 1.88518876148927 NA Intergenic CpG -12673 NR_039565 100628618 NR_039565 ENSMUSG00000092677 Mir5106 mir-5106|mmu-mir-5106|mu-mir-5106 microRNA 5106 ncRNA common_peak1_87_736_-0.212498444028407_9.41927158708087_1.88514015079129 chr2 118489929 118491417 + 1.88514015079129 NA Intergenic Intergenic -10977 NM_009273 20813 Mm.363404 NM_009273 ENSMUSG00000009549 Srp14 14kDa|AW536328 signal recognition particle 14 protein-coding common_peak2_93_794_-0.205067651559343_9.53227722439205_1.88498609740845 chr2 167973866 167976935 + 1.88498609740845 NA exon (NM_011201, exon 8 of 9) exon (NM_011201, exon 8 of 9) 35193 NM_001080708 69553 Mm.68454 NM_001080708 ENSMUSG00000074577 Fam65c 2310033K02Rik|Gm124 family with sequence similarity 65, member C protein-coding common_peak1_35_160_0.400380794944406_7.53110727558682_1.88461448844233 chr14 47518986 47519864 + 1.88461448844233 NA intron (NR_027414, intron 4 of 5) MLT1C|LTR|ERVL-MaLR 46864 NM_001146085 78938 Mm.11935 NM_030236 ENSMUSG00000037536 Fbxo34 2900057B08Rik|5830426G16Rik F-box protein 34 protein-coding common_peak1_35_160_0.400380794944406_7.53110727558682_1.88461448844233-2 chr14 54220070 54220614 + 1.88461448844233 NA Intergenic Intergenic 33587 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_74_614_-0.234292891936935_9.14729615425813_1.88424987391756 chr7 132735380 132736483 + 1.88424987391756 NA intron (NM_175268, intron 4 of 4) intron (NM_175268, intron 4 of 4) 51004 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_267_2306_0.111966033839453_11.2277853056027_1.88372319404326 chr19 59344205 59346414 + 1.88372319404326 NA exon (NM_001033222, exon 1 of 5) exon (NM_001033222, exon 1 of 5) 471 NM_001033222 107368 Mm.27250 NM_001033222 ENSMUSG00000074746 Pdzd8 A630041P07Rik|AV329468|AW228944|Pdzk8 PDZ domain containing 8 protein-coding common_peak1_53_424_-0.282499152999113_8.59006945452551_1.88366504912833-2 chr9 63602397 63603221 + 1.88366504912833 NA promoter-TSS (NM_030068) promoter-TSS (NM_030068) 154 NM_025857 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak1_53_424_-0.282499152999113_8.59006945452551_1.88366504912833 chr5 143234956 143235776 + 1.88366504912833 NA TTS (NR_040700) TTS (NR_040700) 203 NM_177681 231866 Mm.55211 NM_177681 ENSMUSG00000029587 Zfp12 C530015C18|Krox-7|Zfp-12|Znf12 zinc finger protein 12 protein-coding common_peak2_136_1225_-0.163405707155922_10.1780404101128_1.88366414525741 chr7 98701745 98704026 + 1.88366414525741 NA promoter-TSS (NM_028410) promoter-TSS (NM_028410) -478 NM_028410 72981 Mm.4428 NM_028410 ENSMUSG00000030753 Thap12 2900052B10Rik|Dap4|Prkrir|Rpkrir THAP domain containing 12 protein-coding common_peak2_111_747_0.192894912503_9.64334191613914_1.88325687740623 chr17 24936029 24937759 + 1.88325687740623 NA promoter-TSS (NM_013931) promoter-TSS (NM_013931) 83 NM_001163448 30957 Mm.43081 NM_013931 ENSMUSG00000024163 Mapk8ip3 BB120594|D17Wsu15e|JIP-3|JSAP1|JSAP1a|JSAP1b|JSAP1c|JSAP1d|Jip3|Syd2|mKIAA1066 mitogen-activated protein kinase 8 interacting protein 3 protein-coding common_peak2_69_400_0.26059959925497_8.7777582260824_1.88246515928596 chr8 25840091 25841735 + 1.88246515928596 NA promoter-TSS (NM_011791) promoter-TSS (NM_011791) -126 NM_011791 23808 Mm.27706 NM_011791 ENSMUSG00000031575 Ash2l - ash2 (absent, small, or homeotic)-like (Drosophila) protein-coding common_peak2_36_167_0.38746622843265_7.58605053699509_1.88213531783774 chr11 62749177 62750392 + 1.88213531783774 NA Intergenic Intergenic -20691 NM_133208 170740 Mm.339982 NM_133208 ENSMUSG00000005267 Zfp287 B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74 zinc finger protein 287 protein-coding common_peak2_36_167_0.38746622843265_7.58605053699509_1.88213531783774-2 chr15 80681441 80682444 + 1.88213531783774 NA intron (NM_145986, intron 1 of 4) intron (NM_145986, intron 1 of 4) 10095 NM_145986 213956 Mm.132439 NM_145986 ENSMUSG00000022408 Fam83f AW544981 family with sequence similarity 83, member F protein-coding common_peak2_36_167_0.38746622843265_7.58605053699509_1.88213531783774-3 chr16 22438920 22439766 + 1.88213531783774 NA intron (NM_023794, intron 1 of 12) CpG 227 NM_023794 104156 Mm.155708 NM_023794 ENSMUSG00000013089 Etv5 1110005E01Rik|8430401F14Rik|ERM ets variant 5 protein-coding unique_peak1_18_63_0.60036420339689_6.30018210169844_1.88194491635446 chr13 91509315 91509832 + 1.88194491635446 NA intron (NM_024186, intron 1 of 15) MTD|LTR|ERVL-MaLR 48476 NM_024186 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding common_peak1_18_63_0.60036420339689_6.30018210169844_1.88194491635446-2 chr11 32546232 32546686 + 1.88194491635446 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 13193 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_18_63_0.60036420339689_6.30018210169844_1.88194491635446-4 chr5 138194139 138194682 + 1.88194491635446 NA promoter-TSS (NM_177878) promoter-TSS (NM_177878) 96 NM_177878 330216 Mm.19719 NM_177878 ENSMUSG00000049285 Mblac1 - metallo-beta-lactamase domain containing 1 protein-coding common_peak1_18_63_0.60036420339689_6.30018210169844_1.88194491635446-3 chr12 102310615 102311206 + 1.88194491635446 NA intron (NM_001161365, intron 1 of 9) ORR1C1|LTR|ERVL-MaLR 27269 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_18_63_0.60036420339689_6.30018210169844_1.88194491635446 chr1 194984797 194985252 + 1.88194491635446 NA Intergenic L2a|LINE|L2 -8065 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA common_peak2_142_1028_0.165163079688458_10.0896088067382_1.88184945956722 chr7 28349957 28351745 + 1.88184945956722 NA promoter-TSS (NR_028129) promoter-TSS (NR_028129) 162 NM_013647 20055 Mm.702 NM_013647 ENSMUSG00000037563 Rps16 AA420385|AI317031 ribosomal protein S16 protein-coding common_peak1_290_2962_-0.103370031444589_11.481157895239_1.88122514832514 chr18 38418471 38420420 + 1.88122514832514 NA intron (NM_022996, intron 1 of 7) intron (NM_022996, intron 1 of 7) 470 NM_022996 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding common_peak1_22_169_-0.470930132044192_7.17392587011561_1.88117789336509-3 chr9 57910541 57910868 + 1.88117789336509 NA promoter-TSS (NM_001122873) promoter-TSS (NM_001122873) -282 NM_027086 69459 Mm.41735 NM_027086 ENSMUSG00000055720 Ubl7 2300004C15Rik ubiquitin-like 7 (bone marrow stromal cell-derived) protein-coding common_peak1_22_169_-0.470930132044192_7.17392587011561_1.88117789336509 chr4 6791903 6792456 + 1.88117789336509 NA intron (NM_145711, intron 3 of 8) intron (NM_145711, intron 3 of 8) 198544 NM_145711 252838 Mm.435828 NM_145711 ENSMUSG00000041272 Tox 1700007F02Rik thymocyte selection-associated high mobility group box protein-coding common_peak1_22_169_-0.470930132044192_7.17392587011561_1.88117789336509-2 chr7 16048451 16048856 + 1.88117789336509 NA Intergenic Intergenic -23289 NM_001099277 666528 Mm.290718 NM_001099277 ENSMUSG00000078796 Zfp541 EG666528|Znf541 zinc finger protein 541 protein-coding common_peak1_22_169_-0.470930132044192_7.17392587011561_1.88117789336509-4 chr9 94606869 94607375 + 1.88117789336509 NA Intergenic Intergenic -62770 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak2_58_469_-0.270990541523174_8.74102167580341_1.8809285136954 chr6 65611112 65613164 + 1.8809285136954 NA intron (NM_001001495, intron 6 of 7) intron (NM_001001495, intron 6 of 7) 21740 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak2_61_340_0.279666586896489_8.55346122247242_1.88062495891494 chr2 28241339 28243016 + 1.88062495891494 NA Intergenic Intergenic 36488 NM_019498 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding common_peak1_23_176_-0.453830081990903_7.24069050908755_1.88002983630198 chr10 39458320 39458828 + 1.88002983630198 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 88775 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_23_176_-0.453830081990903_7.24069050908755_1.88002983630198-2 chr5 123151320 123151761 + 1.88002983630198 NA intron (NM_001040398, intron 6 of 16) L2a|LINE|L2 9347 NM_001040398 208043 Mm.250391 NM_177581 ENSMUSG00000038384 Setd1b AA516740|BC035291|KMT2G|mKIAA1076 SET domain containing 1B protein-coding common_peak2_62_504_-0.258530417687375_8.85087436879547_1.87987698741059 chr10 99193637 99195731 + 1.87987698741059 NA intron (NM_027740, intron 11 of 11) intron (NM_027740, intron 11 of 11) -68547 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_34_154_0.405321309249296_7.47878505989889_1.87962392466174 chr4 128654521 128655275 + 1.87962392466174 NA intron (NM_001195130, intron 1 of 14) CpG 196 NM_001195130 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic-like 2 (Drosophila) protein-coding common_peak1_34_154_0.405321309249296_7.47878505989889_1.87962392466174-2 chr6 31399943 31400663 + 1.87962392466174 NA intron (NM_013791, intron 1 of 17) intron (NM_013791, intron 1 of 17) 1475 NM_013791 27418 Mm.238038 NM_013791 ENSMUSG00000025609 Mkln1 A130067F06Rik|AU015903|BB154892 muskelin 1, intracellular mediator containing kelch motifs protein-coding common_peak2_65_370_0.268656882226434_8.66960381773402_1.8792170109167 chr13 49681480 49682815 + 1.8792170109167 NA promoter-TSS (NM_172015) promoter-TSS (NM_172015) 17 NM_172015 105148 Mm.21118 NM_172015 ENSMUSG00000037851 Iars 2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS isoleucine-tRNA synthetase protein-coding common_peak1_391_4219_-0.0863141131247964_11.9998702270321_1.87901259490972 chr4 59277922 59283527 + 1.87901259490972 NA Intergenic (A)n|Simple_repeat|Simple_repeat 20673 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_100_652_0.205909012059026_9.45389368757595_1.8789878411537 chr12 4816901 4818441 + 1.8789878411537 NA promoter-TSS (NM_025323) promoter-TSS (NM_025323) 63 NM_025323 66055 Mm.102627 NM_025323 ENSMUSG00000037361 Sf3b6 0610009D07Rik|6030419K15Rik|AV001342|Sf3b14 splicing factor 3B, subunit 6 protein-coding common_peak1_25_101_0.482995902669437_6.91392329330621_1.87874342057606 chr10 118087085 118087649 + 1.87874342057606 NA Intergenic Intergenic -54420 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak2_25_101_0.482995902669437_6.91392329330621_1.87874342057606 chr19 32680684 32681432 + 1.87874342057606 NA intron (NM_026487, intron 8 of 9) intron (NM_026487, intron 8 of 9) 31240 NM_026487 67979 Mm.27123 NM_026487 ENSMUSG00000013662 Atad1 4921525H23Rik|AW107648|Thorase ATPase family, AAA domain containing 1 protein-coding common_peak1_25_101_0.482995902669437_6.91392329330621_1.87874342057606-2 chr3 37476416 37477126 + 1.87874342057606 NA intron (NM_001310473, intron 14 of 16) intron (NM_001310473, intron 14 of 16) 56821 NM_021343 57815 Mm.172679 NM_021343 ENSMUSG00000027722 Spata5 2510048F20Rik|C78064|Spaf spermatogenesis associated 5 protein-coding common_peak2_98_842_-0.197934357127918_9.62042164237812_1.8787280476707 chr18 25168129 25169602 + 1.8787280476707 NA promoter-TSS (NM_001004361) promoter-TSS (NM_001004361) 12 NM_001142698 66648 Mm.263189 NM_001004361 ENSMUSG00000024269 Tpgs2 5730437P09Rik|5730494M16Rik|AI666318|Pgs2 tubulin polyglutamylase complex subunit 2 protein-coding common_peak1_345_3192_0.0951260051088134_11.6882598401245_1.87857188025888 chr19 7017050 7020335 + 1.87857188025888 NA exon (NM_153795, exon 2 of 15) exon (NM_153795, exon 2 of 15) 777 NM_153795 108101 Mm.157591 NM_153795 ENSMUSG00000024965 Fermt3 C79673|Kindlin3 fermitin family member 3 protein-coding common_peak1_140_1266_-0.159935205561506_10.2272332063601_1.8783147414454 chr13 103773673 103774920 + 1.8783147414454 NA Intergenic CpG -9714 NM_172592 218543 Mm.458176 NM_172592 ENSMUSG00000032621 Srek1 8430401B01|AI450757|AI462342|SRrp508|SRrp86|Sfrs12|Srsf12 splicing regulatory glutamine/lysine-rich protein 1 protein-coding unique_peak2_9_73_-0.744931449184531_5.83698764103668_1.87828021823437 chr13 113058083 113058629 + 1.87828021823437 NA intron (NM_001281487, intron 3 of 11) intron (NM_001281487, intron 3 of 11) -11968 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak1_14_44_0.690191025081673_5.83694860887051_1.87828021823437 chr3 152431895 152432330 + 1.87828021823437 NA intron (NM_001287139, intron 4 of 13) intron (NM_001287139, intron 4 of 13) 35428 NM_001287139 108946 Mm.379292 NM_198416 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 protein-coding unique_peak1_14_44_0.690191025081673_5.83694860887051_1.87828021823437 chr19 36902441 36902870 + 1.87828021823437 NA Intergenic Intergenic 16944 NM_028263 72514 Mm.41674 NM_028263 ENSMUSG00000047632 Fgfbp3 2610306H15Rik|Fgf-bp3 fibroblast growth factor binding protein 3 protein-coding common_peak1_27_112_0.466385787602738_7.05337185621656_1.87679991625188 chr14 56294625 56295118 + 1.87679991625188 NA Intergenic B1_Mur2|SINE|Alu -32611 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak1_27_112_0.466385787602738_7.05337185621656_1.87679991625188-3 chr8 123235596 123236202 + 1.87679991625188 NA intron (NM_030176, intron 1 of 2) intron (NM_030176, intron 1 of 2) 310 NM_030176 78779 Mm.41459 NM_030176 ENSMUSG00000033594 Spata2l 2610039E05Rik|AI648233|mKIAA4138 spermatogenesis associated 2-like protein-coding common_peak1_27_112_0.466385787602738_7.05337185621656_1.87679991625188-4 chrX 42425304 42425868 + 1.87679991625188 NA Intergenic L1_Mus4|LINE|L1 -76979 NM_011364 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak1_27_112_0.466385787602738_7.05337185621656_1.87679991625188-2 chr2 160731241 160731713 + 1.87679991625188 NA intron (NM_021280, intron 1 of 33) CpG 167 NM_021280 18803 Mm.44463 NM_021280 ENSMUSG00000016933 Plcg1 AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1 phospholipase C, gamma 1 protein-coding unique_peak2_27_112_0.466385787602738_7.05337185621656_1.87679991625188 chr2 91951950 91953010 + 1.87679991625188 NA intron (NM_138306, intron 1 of 30) Charlie1a|DNA|hAT-Charlie -2132 NM_001166597 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak1_286_2914_-0.104300793756963_11.4571297712094_1.87628430574328 chr17 24168446 24170126 + 1.87628430574328 NA non-coding (NR_037854, exon 1 of 3) non-coding (NR_037854, exon 1 of 3) 109 NR_037854 100039636 Mm.30155 NR_037854 Atp6v0c-ps2 Atp6l-ps2|Gm15487 ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 2 pseudo common_peak2_95_813_-0.20188489380144_9.56794253736553_1.87627883830257 chr7 96950992 96952453 + 1.87627883830257 NA 5' UTR (NM_153591, exon 1 of 14) 5' UTR (NM_153591, exon 1 of 14) 195 NM_153591 244141 Mm.274864 NM_153591 ENSMUSG00000018995 Nars2 AI875199 asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) protein-coding common_peak2_348_3227_0.0946754339864864_11.703762580271_1.87607204717243 chr7 47012308 47016570 + 1.87607204717243 NA Intergenic B1_Mur2|SINE|Alu -6025 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding common_peak1_215_1751_0.127257440797489_10.8384157799999_1.87573355076439 chr9 64736463 64738148 + 1.87573355076439 NA intron (NM_017382, intron 1 of 4) CpG 451 NM_017382 53869 Mm.1387 NM_017382 ENSMUSG00000004771 Rab11a - RAB11A, member RAS oncogene family protein-coding common_peak1_79_479_0.237468254394971_9.025624722806_1.87566292547053 chr8 70000862 70002042 + 1.87566292547053 NA Intergenic Intergenic -5068 NM_145596 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak2_51_268_0.310571193270665_8.22674795919196_1.87544436294828 chr3 79567199 79568758 + 1.87544436294828 NA promoter-TSS (NM_001162999) promoter-TSS (NM_001162999) -299 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding common_peak1_51_268_0.310571193270665_8.22674795919196_1.87544436294828 chr11 64037385 64038238 + 1.87544436294828 NA intron (NM_178379, intron 4 of 6) intron (NM_178379, intron 4 of 6) 41661 NM_178379 70383 Mm.340211 NM_178379 ENSMUSG00000042148 Cox10 2410004F01Rik|AU042636 cytochrome c oxidase assembly protein 10 protein-coding common_peak2_83_698_-0.218449379204225_9.33992395577332_1.87534978392479 chr8 105826123 105827891 + 1.87534978392479 NA promoter-TSS (NM_024445) promoter-TSS (NM_024445) 343 NM_145824 74334 Mm.4206 NM_145824 ENSMUSG00000037415 Ranbp10 4432417N03Rik RAN binding protein 10 protein-coding common_peak2_116_1020_-0.178689185116657_9.90642255831947_1.87515095670686 chr10 75920718 75922256 + 1.87515095670686 NA 5' UTR (NM_011418, exon 1 of 9) 5' UTR (NM_011418, exon 1 of 9) 127 NM_011418 20587 Mm.279751 NM_011418 ENSMUSG00000000902 Smarcb1 AU020204|Baf47|Ini1|SNF5/INI1|Snf5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 protein-coding unique_peak2_17_131_-0.539708757485786_6.77453974061556_1.87463513715066 chr18 35930164 35931105 + 1.87463513715066 NA Intergenic CpG -34196 NM_028707 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding common_peak1_17_131_-0.539708757485786_6.77453974061556_1.87463513715066-2 chr8 126946065 126946401 + 1.87463513715066 NA promoter-TSS (NM_024214) promoter-TSS (NM_024214) -312 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak1_17_131_-0.539708757485786_6.77453974061556_1.87463513715066 chr18 39519556 39519966 + 1.87463513715066 NA Intergenic Intergenic -32516 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak2_17_131_-0.539708757485786_6.77453974061556_1.87463513715066 chr17 78977467 78978470 + 1.87463513715066 NA intron (NM_029239, intron 5 of 18) intron (NM_029239, intron 5 of 18) 30537 NM_001171005 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding common_peak2_17_131_-0.539708757485786_6.77453974061556_1.87463513715066-2 chrX 150458862 150459444 + 1.87463513715066 NA promoter-TSS (NM_001164683) promoter-TSS (NM_001164683) -3 NM_001164683 382245 Mm.277309 NM_001164683 ENSMUSG00000041353 Tmem29 2700081K05Rik|6330540D07Rik|CXorf44-like transmembrane protein 29 protein-coding common_peak1_105_695_0.199410580780739_9.5426487862391_1.87436674546644 chr8 4612632 4614068 + 1.87436674546644 NA intron (NM_145591, intron 1 of 3) intron (NM_145591, intron 1 of 3) 180 NM_145591 233987 Mm.102799 NM_145591 ENSMUSG00000058748 Zfp958 - zinc finger protein 958 protein-coding common_peak2_161_1209_0.152163062017278_10.3168728631706_1.87434856075904 chr17 46645154 46646983 + 1.87434856075904 NA promoter-TSS (NM_029091) promoter-TSS (NM_029091) -153 NM_001316742 27398 Mm.391007 NM_025302 ENSMUSG00000002767 Mrpl2 CGI-22|L2mt|MRP-L14|MRP-L2|Rpml14 mitochondrial ribosomal protein L2 protein-coding common_peak2_499_5083_0.0755970863824569_12.3495468581962_1.87402676750204 chr9 101072642 101079389 + 1.87402676750204 NA intron (NM_001100451, intron 1 of 1) intron (NM_001100451, intron 1 of 1) 1253 NM_001100451 77853 Mm.326206 NM_001100451 ENSMUSG00000066415 Msl2 E130103E02Rik|Msl2l1|Rnf184 male-specific lethal 2 homolog (Drosophila) protein-coding common_peak1_194_1848_-0.131480472918016_10.7867892729452_1.87367362829862 chr9 41083737 41085308 + 1.87367362829862 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) 72972 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak2_186_1759_-0.134442039422636_10.7141386938133_1.87342535153085 chr1 181244865 181248196 + 1.87342535153085 NA Intergenic Intergenic -34552 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak1_209_1689_0.129385010693628_10.7875000365164_1.87278401980809 chr11 88131397 88133999 + 1.87278401980809 NA intron (NM_198013, intron 1 of 10) RSINE1|SINE|B4 33552 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding unique_peak2_46_364_-0.308621566341362_8.3574418705967_1.87270728258954 chr12 3440751 3442537 + 1.87270728258954 NA intron (NM_172421, intron 1 of 10) L1MD2|LINE|L1 14787 NM_172421 75302 Mm.120475 NM_172421 ENSMUSG00000037486 Asxl2 4930556B16Rik|mKIAA1685 additional sex combs like 2 (Drosophila) protein-coding common_peak2_69_567_-0.241689093794792_9.02890257260729_1.87264807066454 chr8 36081242 36083602 + 1.87264807066454 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -12406 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak2_28_118_0.453845551204624_7.12174053891026_1.87263926388322-2 chr8 117345185 117346116 + 1.87263926388322 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -3520 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding unique_peak2_28_118_0.453845551204624_7.12174053891026_1.87263926388322 chr16 13437358 13438080 + 1.87263926388322 NA Intergenic Intergenic -11804 NR_030549 100124432 NR_030549 ENSMUSG00000076972 Mir193b Mir193|Mirn193b|mir-193b microRNA 193b ncRNA common_peak2_28_118_0.453845551204624_7.12174053891026_1.87263926388322 chr2 160731102 160731712 + 1.87263926388322 NA promoter-TSS (NM_021280) promoter-TSS (NM_021280) 97 NM_021280 18803 Mm.44463 NM_021280 ENSMUSG00000016933 Plcg1 AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1 phospholipase C, gamma 1 protein-coding common_peak2_32_142_0.417448610882491_7.36859564221963_1.87240684087522 chr2 128324728 128325674 + 1.87240684087522 NA intron (NR_028590, intron 2 of 2) MIRb|SINE|MIR 104150 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_32_142_0.417448610882491_7.36859564221963_1.87240684087522 chr15 78248689 78249229 + 1.87240684087522 NA intron (NM_008677, intron 1 of 9) intron (NM_008677, intron 1 of 9) 4148 NM_008677 17972 Mm.2068 NM_008677 ENSMUSG00000071715 Ncf4 AI451400|p40phox neutrophil cytosolic factor 4 protein-coding common_peak2_91_577_0.216759743965545_9.28330555448345_1.87160473370908 chr7 109958664 109961069 + 1.87160473370908 NA intron (NM_021494, intron 1 of 22) intron (NM_021494, intron 1 of 22) 556 NM_021494 19347 Mm.21904 NM_021494 ENSMUSG00000035901 Dennd5a 1500012B19Rik|AJ245569|AW496491|ORF37|Rab6ip1|mKIAA1091 DENN/MADD domain containing 5A protein-coding common_peak1_159_1466_-0.147681994483545_10.4448121584316_1.8710835093977 chr5 64864044 64866281 + 1.8710835093977 NA Intergenic Intergenic 61639 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding unique_peak2_24_184_-0.445366268379928_7.30869832632635_1.8704065178724 chr1 9744312 9745910 + 1.8704065178724 NA intron (NM_173443, intron 1 of 2) intron (NM_173443, intron 1 of 2) -2537 NR_040462 73331 Mm.460470 NR_040462 1700034P13Rik - RIKEN cDNA 1700034P13 gene ncRNA common_peak1_31_136_0.424833491350998_7.31044882863602_1.8704065178724 chr4 89550785 89551413 + 1.8704065178724 NA Intergenic Intergenic -137099 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak2_24_184_-0.445366268379928_7.30869832632635_1.8704065178724 chr7 128166574 128167477 + 1.8704065178724 NA Intergenic RLTR12BD_Mm|LTR|ERVK -6921 NM_001029872 381924 Mm.334257 NM_001029872 ENSMUSG00000070369 Itgad Cd11d integrin, alpha D protein-coding common_peak1_146_1329_-0.156199777324584_10.2991106417263_1.8703518642 chr2 3511799 3512889 + 1.8703518642 NA promoter-TSS (NM_177647) promoter-TSS (NM_177647) 470 NR_103465 50497 Mm.89341 NM_015765 ENSMUSG00000051396 Hspa14 70kDa|HSP70L1|Hsp70-4|NST-1|hsr.1 heat shock protein 14 protein-coding common_peak1_29_124_0.442872147935616_7.1872203586299_1.87033917412396-2 chrX 42500219 42500874 + 1.87033917412396 NA Intergenic L2a|LINE|L2 -2019 NM_011364 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak1_29_124_0.442872147935616_7.1872203586299_1.87033917412396 chr10 121473697 121474118 + 1.87033917412396 NA intron (NM_138956, intron 1 of 4) intron (NM_138956, intron 1 of 4) 2343 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding common_peak1_594_6326_0.0678720766031145_12.6612419188164_1.87030683331872 chr7 28807582 28810667 + 1.87030683331872 NA Intergenic CpG -1766 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak1_118_1040_-0.176681983059773_9.93541336176953_1.87008259223658 chr2 29869173 29870439 + 1.87008259223658 NA intron (NM_207298, intron 1 of 11) intron (NM_207298, intron 1 of 11) 312 NM_207298 99151 Mm.296336 NM_207298 ENSMUSG00000039787 Cercam 2600006K01Rik|AL024097|Ceecam1 cerebral endothelial cell adhesion molecule protein-coding common_peak1_35_271_-0.356165168191316_7.90938025715468_1.86993409224583 chr18 47339337 47340149 + 1.86993409224583 NA intron (NM_018744, intron 1 of 18) intron (NM_018744, intron 1 of 18) 29125 NM_018744 20358 Mm.40909 NM_018744 ENSMUSG00000019647 Sema6a A730020P05Rik|AI851735|Sema6A-1|Semaq|VIa sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A protein-coding common_peak1_152_1123_0.157378973059814_10.2131158067508_1.86954176703027 chr11 115172008 115173729 + 1.86954176703027 NA intron (NM_012030, intron 1 of 5) intron (NM_012030, intron 1 of 5) 9527 NM_012030 26941 Mm.27842 NM_012030 ENSMUSG00000020733 Slc9a3r1 EBP-50|NHE-RF|NHERF-1|NHERF1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 protein-coding common_peak2_127_890_0.176808575162314_9.88768590910308_1.86898783590931 chr5 114805014 114807409 + 1.86898783590931 NA TTS (NM_026718) TTS (NM_026718) 7765 NR_027818 66236 Mm.268546 NR_027817 ENSMUSG00000072694 1500011B03Rik AI415201|AV141149|AW556386 RIKEN cDNA 1500011B03 gene ncRNA common_peak1_36_280_-0.354642669009516_7.95710498571617_1.86826421635193 chr2 180436634 180437289 + 1.86826421635193 NA Intergenic RMER17B|LTR|ERVK -24017 NM_148933 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding common_peak1_36_280_-0.354642669009516_7.95710498571617_1.86826421635193-2 chr6 108477153 108477824 + 1.86826421635193 NA intron (NM_010585, intron 46 of 61) intron (NM_010585, intron 46 of 61) -12255 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_45_355_-0.310660315686533_8.32040327312313_1.8679688889504 chr7 27688556 27690179 + 1.8679688889504 NA promoter-TSS (NM_001112731) promoter-TSS (NM_001112731) 27 NM_001112731 112415 Mm.145362 NM_198417 ENSMUSG00000057093 Zfp607b C030039L03Rik zinc finger protein 607B protein-coding common_peak2_55_296_0.298857940403515_8.36374809100252_1.86793440960663 chr5 144100136 144101066 + 1.86793440960663 NA 5' UTR (NM_001081109, exon 1 of 14) 5' UTR (NM_001081109, exon 1 of 14) 165 NM_001081109 231876 Mm.288726 NM_001081109 ENSMUSG00000038970 Lmtk2 2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk lemur tyrosine kinase 2 protein-coding common_peak1_56_450_-0.272484903705207_8.68074117140278_1.8676775109677 chr3 107206293 107207187 + 1.8676775109677 NA Intergenic RMER10A|LTR|ERVL 14992 NM_001111143 229697 Mm.297051 NM_001111143 ENSMUSG00000046213 Cym Gm131 chymosin protein-coding common_peak1_19_68_0.582609770852607_6.39982934220447_1.86766458580328-2 chr8 115233700 115234168 + 1.86766458580328 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 472960 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_19_68_0.582609770852607_6.39982934220447_1.86766458580328 chr14 121318173 121318665 + 1.86766458580328 NA intron (NM_145465, intron 2 of 10) intron (NM_145465, intron 2 of 10) 60811 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_50_261_0.314247775590006_8.19054688933245_1.86718205551064 chr2 35728995 35730281 + 1.86718205551064 NA 3' UTR (NM_001001602, exon 14 of 14) 3' UTR (NM_001001602, exon 14 of 14) 32906 NM_001290639 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak2_99_644_0.206084464198479_9.43619758240986_1.86684763017774 chr1 88575453 88576865 + 1.86684763017774 NA Intergenic Intergenic 24642 NR_037971 100503197 Mm.99352 NR_037971 ENSMUSG00000100798 Gm19589 - predicted gene, 19589 ncRNA unique_peak2_26_199_-0.42164862293513_7.43303187830716_1.86640779227967 chr11 117965794 117966884 + 1.86640779227967 NA 3' UTR (NM_007707, exon 2 of 2) 3' UTR (NM_007707, exon 2 of 2) 3027 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak1_26_199_-0.42164862293513_7.43303187830716_1.86640779227967 chr8 117224563 117225146 + 1.86640779227967 NA Intergenic Intergenic -32165 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_107_713_0.195651925183208_9.5776062266207_1.86597358570362-2 chr8 121186352 121188594 + 1.86597358570362 NA Intergenic Intergenic 59788 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak2_107_713_0.195651925183208_9.5776062266207_1.86597358570362 chr7 127911825 127913120 + 1.86597358570362 NA promoter-TSS (NM_026370) promoter-TSS (NM_026370) -45 NM_026370 67773 Mm.425492 NM_026370 ENSMUSG00000030801 Kat8 2010203C02Rik|5830450F21Rik|D7Ertd629e|MOF|Myst1 K(lysine) acetyltransferase 8 protein-coding common_peak1_51_407_-0.290391786144207_8.52722944889939_1.86520913971904 chr11 16977964 16978873 + 1.86520913971904 NA intron (NM_019549, intron 9 of 9) intron (NM_019549, intron 9 of 9) 27008 NM_176982 319701 Mm.120672 NM_176982 ENSMUSG00000044966 Fbxo48 A630050E13Rik F-box protein 48 protein-coding common_peak2_145_1057_0.16180742545796_10.128027624843_1.86472699361375 chr13 45849717 45853319 + 1.86472699361375 NA intron (NM_009124, intron 3 of 7) intron (NM_009124, intron 3 of 7) 113473 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_265_2285_0.111902935634239_11.2145611560316_1.86438234150597 chr15 37005796 37008354 + 1.86438234150597 NA intron (NM_026521, intron 1 of 3) CpG 327 NM_026521 68036 Mm.371631 NM_026521 ENSMUSG00000062397 Zfp706 3110006P09Rik|AA793007|AW536850|C77232|Znf706 zinc finger protein 706 protein-coding common_peak2_227_1877_0.122741994269113_10.9363523447883_1.86417108305339 chr9 21434734 21437536 + 1.86417108305339 NA intron (NM_007871, intron 1 of 19) intron (NM_007871, intron 1 of 19) 11227 NM_001039520 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding common_peak2_210_1699_0.129280308113898_10.795959185082_1.86394299752734 chr4 46137728 46139436 + 1.86394299752734 NA promoter-TSS (NM_173033) promoter-TSS (NM_173033) 71 NM_001033201 433702 Mm.389536 NM_001033201 ENSMUSG00000028330 Ncbp1 AU014645|AW538051|CBP80 nuclear cap binding protein subunit 1 protein-coding common_peak1_44_346_-0.312613215013629_8.28248524507145_1.86366934123955 chr7 13278763 13279455 + 1.86366934123955 NA promoter-TSS (NM_001083188) promoter-TSS (NM_001083188) -156 NM_001083188 16881 Mm.288179 NM_010715 ENSMUSG00000056394 Lig1 AL033288|LigI ligase I, DNA, ATP-dependent protein-coding common_peak1_43_213_0.344943067479161_7.91393852014073_1.86343210035012 chr8 128615277 128616374 + 1.86343210035012 NA Intergenic Intergenic -69829 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_43_213_0.344943067479161_7.91393852014073_1.86343210035012 chr15 28179163 28180262 + 1.86343210035012 NA Intergenic Intergenic -24054 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding common_peak2_189_1792_-0.133077671406808_10.741620937165_1.86342748831627 chr19 43752144 43754171 + 1.86342748831627 NA promoter-TSS (NM_144874) promoter-TSS (NM_144874) 134 NM_025530 66388 Mm.20257 NM_025530 ENSMUSG00000025193 Cutc 2310039I18Rik|AI326282|CGI-32 cutC copper transporter protein-coding common_peak1_25_192_-0.437035792627149_7.37393914095451_1.86295745433986 chr11 77385780 77386385 + 1.86295745433986 NA intron (NM_001291190, intron 1 of 13) intron (NM_001291190, intron 1 of 13) 37802 NM_001291190 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot homolog 2 (Drosophila) protein-coding common_peak1_33_255_-0.369851427839473_7.81507428608026_1.8625862020762-2 chr11 117776958 117777706 + 1.8625862020762 NA intron (NM_181321, intron 5 of 7) intron (NM_181321, intron 5 of 7) 3289 NM_181321 217353 Mm.286963 NM_145439 ENSMUSG00000025572 Tmc6 D11Ertd204e|EVER1 transmembrane channel-like gene family 6 protein-coding common_peak1_33_255_-0.369851427839473_7.81507428608026_1.8625862020762 chr1 130516679 130517425 + 1.8625862020762 NA Intergenic Intergenic -54312 NM_010016 13136 Mm.101591 NM_010016 ENSMUSG00000026399 Cd55 Daf|Daf-GPI|Daf1|GPI-DAF CD55 molecule, decay accelerating factor for complement protein-coding unique_peak2_18_138_-0.518576869326617_6.8596526380602_1.86230349003795-2 chr2 25261914 25262484 + 1.86230349003795 NA promoter-TSS (NM_175286) promoter-TSS (NM_175286) -399 NM_175286 97031 Mm.308539 NM_175286 ENSMUSG00000048707 Tprn C430004E15Rik|C87750 taperin protein-coding common_peak1_18_138_-0.518576869326617_6.8596526380602_1.86230349003795 chr19 40665082 40665486 + 1.86230349003795 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 5514 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding unique_peak2_18_138_-0.518576869326617_6.8596526380602_1.86230349003795 chr13 48977659 48978638 + 1.86230349003795 NA Intergenic Intergenic 10036 NR_015601 68128 Mm.426304 NR_015601 Fam120aos C030044B11Rik family with sequence similarity 120A, opposite strand ncRNA common_peak1_18_138_-0.518576869326617_6.8596526380602_1.86230349003795-2 chr4 11768807 11769204 + 1.86230349003795 NA intron (NM_019753, intron 2 of 17) intron (NM_019753, intron 2 of 17) 10848 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak1_27_207_-0.413874968123166_7.49350223407951_1.86211238645832 chr3 98348181 98348760 + 1.86211238645832 NA Intergenic MLT1D|LTR|ERVL-MaLR -8501 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding common_peak2_27_207_-0.413874968123166_7.49350223407951_1.86211238645832 chr4 88640573 88641948 + 1.86211238645832 NA Intergenic Intergenic 3199 NM_177347 230396 Mm.246592 NM_177347 ENSMUSG00000063376 Ifna13 - interferon alpha 13 protein-coding common_peak1_32_247_-0.376876362725995_7.76575812902388_1.86002829514543 chrX 57337247 57337765 + 1.86002829514543 NA intron (NM_152801, intron 1 of 21) intron (NM_152801, intron 1 of 21) 1223 NM_152801 73341 Mm.261443 NM_152801 ENSMUSG00000031133 Arhgef6 1600028C08Rik|1700038J06Rik|4930592P22Rik|alpha-PIX Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak1_301_2687_0.102815273393148_11.4437250594753_1.85965115727046 chr9 108001898 108003736 + 1.85965115727046 NA 5' UTR (NM_013785, exon 1 of 6) 5' UTR (NM_013785, exon 1 of 6) 169 NM_013785 27399 Mm.276155 NM_013785 ENSMUSG00000032594 Ip6k1 1200016D08Rik|AU022776|Ihpk1|InsP6|InsP6k1|Itpk6 inositol hexaphosphate kinase 1 protein-coding common_peak2_261_2242_0.112485667946958_11.1874567390598_1.85961337035065 chr17 34200896 34206634 + 1.85961337035065 NA promoter-TSS (NM_011530) promoter-TSS (NM_011530) -714 NM_011530 21355 Mm.14814 NM_011530 ENSMUSG00000024339 Tap2 ABC18|AI462429|APT2|Abcb3|Ham-2|Ham2|MTP2|PSF2|RING11|Tap-2|Y1|jas transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) protein-coding common_peak1_55_441_-0.27472549818715_8.65053981029786_1.85947628786005 chr11 30182883 30183678 + 1.85947628786005 NA intron (NM_175836, intron 1 of 34) intron (NM_175836, intron 1 of 34) 14977 NM_009260 20742 Mm.123110 NM_009260 ENSMUSG00000020315 Sptbn1 9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049 spectrin beta, non-erythrocytic 1 protein-coding common_peak2_28_215_-0.4062241876509_7.55177540833802_1.85931641787783 chr6 41604528 41605920 + 1.85931641787783 NA promoter-TSS (NM_007680) promoter-TSS (NM_007680) -258 NM_001146351 13848 Mm.271976 NM_007680 ENSMUSG00000029869 Ephb6 Cekl|Mep Eph receptor B6 protein-coding common_peak1_28_215_-0.4062241876509_7.55177540833802_1.85931641787783 chr7 58399347 58399954 + 1.85931641787783 NA Intergenic Intergenic -258552 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_147_1338_-0.153931971740187_10.3099742594542_1.85922454643913 chr7 30321735 30323652 + 1.85922454643913 NA promoter-TSS (NM_001033140) promoter-TSS (NM_001033140) -318 NM_001033140 68332 Mm.6844 NM_001033140 ENSMUSG00000074211 Sdhaf1 0610010E21Rik|AI430885|AW490662|Lyrm8 succinate dehydrogenase complex assembly factor 1 protein-coding common_peak2_147_1338_-0.153931971740187_10.3099742594542_1.85922454643913 chr17 26932431 26934542 + 1.85922454643913 NA TTS (NM_053173) TTS (NM_053173) 359 NR_126158 21652 Mm.258953 NM_009343 ENSMUSG00000024193 Phf1 AW557215|D17Ertd455e|Pcl1|Phf2|Tctex3 PHD finger protein 1 protein-coding common_peak2_84_520_0.226502285573984_9.1383907050655_1.85922200636234 chr12 103424952 103425985 + 1.85922200636234 NA intron (NM_020494, intron 1 of 8) MIRb|SINE|MIR 312 NM_001159502 27225 Mm.3935 NM_020494 ENSMUSG00000041645 Ddx24 1700055J08Rik|2510027P10Rik|AI649272 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 protein-coding common_peak2_84_520_0.226502285573984_9.1383907050655_1.85922200636234-2 chr8 74993408 74994502 + 1.85922200636234 NA intron (NM_178017, intron 1 of 10) CpG 305 NM_178017 70823 Mm.261739 NM_178017 ENSMUSG00000034518 Hmgxb4 4733401K04Rik|AI316803|Hmgb2l1 HMG box domain containing 4 protein-coding common_peak1_117_1030_-0.177689901139928_9.92098366679815_1.85891951616139 chr2 34771984 34772915 + 1.85891951616139 NA intron (NM_001163434, intron 2 of 8) CpG 359 NM_022310 14828 Mm.330160 NM_022310 ENSMUSG00000026864 Hspa5 AL022860|AU019543|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|SEZ-7|Sez7|baffled|mBiP heat shock protein 5 protein-coding common_peak2_50_398_-0.292574159094888_8.4939578566749_1.85842523712812 chr10 96324580 96326581 + 1.85842523712812 NA Intergenic Intergenic 99373 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_31_239_-0.384025021296995_7.71487808496002_1.85832052224481 chr4 88775955 88776982 + 1.85832052224481 NA promoter-TSS (NM_001161609).5 promoter-TSS (NM_001161609).5 -294 NM_001243165 545647 Mm.380019 NM_001243165 ENSMUSG00000096582 Gm13289 OTTMUSG00000011290 predicted gene 13289 protein-coding unique_peak2_54_289_0.301381928370981_8.33060005420042_1.85823027846698 chr4 3729619 3731798 + 1.85823027846698 NA intron (NM_010747, intron 1 of 12) intron (NM_010747, intron 1 of 12) 15744 NR_028126 70720 Mm.445696 NR_028126 6330407A03Rik - RIKEN cDNA 6330407A03 gene ncRNA common_peak2_138_1244_-0.159945246162842_10.201957403874_1.85813333602441 chr17 56583152 56584659 + 1.85813333602441 NA intron (NM_001029979, intron 1 of 20) intron (NM_001029979, intron 1 of 20) 678 NM_001029979 224902 Mm.214973 NM_001029979 ENSMUSG00000042625 Safb2 AA389433|AI255170|mKIAA0138 scaffold attachment factor B2 protein-coding unique_peak2_29_223_-0.398698489459901_7.60800567732765_1.85784708811233 chr17 36414270 36415615 + 1.85784708811233 NA Intergenic Intergenic -46525 NM_201608 110696 Mm.303091 NM_201608 ENSMUSG00000058124 H2-M10.3 5.3H histocompatibility 2, M region locus 10.3 protein-coding unique_peak2_30_231_-0.391298790393265_7.66233159993094_1.85755718702245 chr7 129591265 129592607 + 1.85755718702245 NA promoter-TSS (NM_172255) promoter-TSS (NM_172255) 73 NM_172255 207425 Mm.229323 NM_172255 ENSMUSG00000042055 Wdr11 2900055P10Rik|AW489876|Brwd2|mKIAA1351 WD repeat domain 11 protein-coding unique_peak2_14_109_-0.599315592113312_6.481701917468_1.8575536575462 chr12 116404586 116405252 + 1.8575536575462 NA promoter-TSS (NM_133762) promoter-TSS (NM_133762) 242 NR_028421 319545 Mm.390543 NR_028421 D430020J02Rik - RIKEN cDNA D430020J02 gene ncRNA unique_peak2_14_109_-0.599315592113312_6.481701917468_1.8575536575462-2 chr6 130337152 130338001 + 1.8575536575462 NA promoter-TSS (NM_010648) promoter-TSS (NM_010648) 50 NM_001289605 16634 Mm.425338 NM_010648 ENSMUSG00000067591 Klra3 5E6|Ly49c|NK-2.1|Nk-2|Nk2|Nk2.1 killer cell lectin-like receptor, subfamily A, member 3 protein-coding common_peak2_71_585_-0.236846870176869_9.07633341933381_1.85689600889749 chr4 32055043 32056172 + 1.85689600889749 NA Intergenic Intergenic 91500 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_140_1265_-0.158796085849039_10.2266636465038_1.85514335871275 chr14 77870192 77872294 + 1.85514335871275 NA intron (NM_025384, intron 1 of 5) MTEa|LTR|ERVL-MaLR 3674 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding common_peak2_114_999_-0.179217893690257_9.87617533781696_1.8545827023168 chr2 45017269 45020866 + 1.8545827023168 NA intron (NM_001289521, intron 2 of 8) intron (NM_001289521, intron 2 of 8) 4110 NR_039591 100628598 NR_039591 ENSMUSG00000092679 Mir5129 mir-5129|mmu-mir-5129|mu-mir-5129 microRNA 5129 ncRNA common_peak1_84_707_-0.215963702230505_9.35962369896775_1.85379357143426 chr2 166563863 166565471 + 1.85379357143426 NA Intergenic Intergenic -108051 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak2_84_707_-0.215963702230505_9.35962369896775_1.85379357143426 chr1 92909950 92912236 + 1.85379357143426 NA exon (NM_181405, exon 1 of 11) exon (NM_181405, exon 1 of 11) 268 NM_181405 108657 Mm.200971 NM_181405 ENSMUSG00000026269 Rnpepl1 1110014H17Rik|AI894167 arginyl aminopeptidase (aminopeptidase B)-like 1 protein-coding common_peak1_176_1649_-0.138589387938069_10.6189556151641_1.85365497649835 chr9 59655613 59657641 + 1.85365497649835 NA 5' UTR (NM_011099, exon 1 of 11) 5' UTR (NM_011099, exon 1 of 11) 259 NM_001253883 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding common_peak2_133_1192_-0.163222316359148_10.1387671695157_1.85363009270481 chr6 122601721 122603850 + 1.85363009270481 NA promoter-TSS (NM_031159) promoter-TSS (NM_031159) -341 NM_001134391 11810 Mm.3333 NM_031159 ENSMUSG00000040613 Apobec1 Cdar1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 protein-coding common_peak2_135_964_0.168988062377798_9.99887916334434_1.85354495967637 chr13 59674577 59676172 + 1.85354495967637 NA intron (NM_027307, intron 1 of 10) intron (NM_027307, intron 1 of 10) 410 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding common_peak2_111_748_0.190967463931887_9.64430564042469_1.85310000653622 chr11 106500201 106501977 + 1.85310000653622 NA promoter-TSS (NR_030703) promoter-TSS (NR_030703) 98 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA unique_peak2_19_145_-0.498690331249241_6.9404793932554_1.8530465441337 chr7 80449944 80450792 + 1.8530465441337 NA Intergenic Intergenic -44932 NM_001081454 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak1_19_145_-0.498690331249241_6.9404793932554_1.8530465441337 chr15 72928179 72928600 + 1.8530465441337 NA intron (NM_001164641, intron 15 of 17) B1F|SINE|Alu -118065 NR_002864 353342 Mm.440245 NR_002864 ENSMUSG00000106847 Peg13 - paternally expressed 13 ncRNA common_peak1_19_145_-0.498690331249241_6.9404793932554_1.8530465441337-2 chr9 61665065 61665433 + 1.8530465441337 NA Intergenic B4A|SINE|B4 249261 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_142_1286_-0.157605991638274_10.2509933424016_1.8524321316568 chr7 24971517 24973006 + 1.8524321316568 NA exon (NM_010261, exon 2 of 5) exon (NM_010261, exon 2 of 5) 467 NM_010261 14470 Mm.22473 NM_010261 ENSMUSG00000003380 Rabac1 2310040I06Rik|Gbpap1|PRA1|prenylin Rab acceptor 1 (prenylated) protein-coding common_peak2_49_389_-0.29470281042687_8.45997890853618_1.85193044644074-2 chr16 18425558 18427125 + 1.85193044644074 NA promoter-TSS (NM_013711) promoter-TSS (NM_013711) -76 NM_013711 26462 Mm.390906 NM_013711 ENSMUSG00000075704 Txnrd2 AA118373|ESTM573010|TGR|Tr3|Trxr2|Trxrd2 thioredoxin reductase 2 protein-coding common_peak2_49_389_-0.29470281042687_8.45997890853618_1.85193044644074 chr11 87452895 87454890 + 1.85193044644074 NA intron (NM_031386, intron 2 of 30) intron (NM_031386, intron 2 of 30) 26301 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak2_77_464_0.238468854798823_8.98032133339481_1.85160753387799 chr12 36135823 36137133 + 1.85160753387799 NA intron (NM_025840, intron 1 of 11) intron (NM_025840, intron 1 of 11) 20347 NM_025840 66912 Mm.288669 NM_025840 ENSMUSG00000020547 Bzw2 1110001I24Rik|Bdm2|HSPC028 basic leucine zipper and W2 domains 2 protein-coding common_peak1_54_432_-0.276932196340809_8.61975711655632_1.8514728184077-2 chr1 138135323 138136094 + 1.8514728184077 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 39418 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_54_432_-0.276932196340809_8.61975711655632_1.8514728184077 chr1 20819461 20820508 + 1.8514728184077 NA intron (NM_008563, intron 1 of 16) CpG 229 NM_008563 17215 Mm.4502 NM_008563 ENSMUSG00000041859 Mcm3 AL033361|C80350|Mcmd|P1|p1.m minichromosome maintenance complex component 3 protein-coding common_peak1_550_5745_0.0708812219971904_12.5237828885311_1.85144833360579 chr19 8979838 8984452 + 1.85144833360579 NA Intergenic Intergenic -7139 NR_104460 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_95_611_0.209612247772156_9.36219396657873_1.85143485335714 chr10 75293415 75295665 + 1.85143485335714 NA intron (NM_153406, intron 13 of 15) intron (NM_153406, intron 13 of 15) -22337 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_95_611_0.209612247772156_9.36219396657873_1.85143485335714 chr17 32053351 32054544 + 1.85143485335714 NA exon (NM_028244, exon 10 of 16) exon (NM_028244, exon 10 of 16) 5662 NM_001163734 72462 Mm.102761 NM_028244 ENSMUSG00000058392 Rrp1b 2600005C20Rik|D030064A17|Kiaa0179|mKIAA0179 ribosomal RNA processing 1 homolog B (S. cerevisiae) protein-coding common_peak2_42_329_-0.320595043991865_8.20602469224988_1.85127137857412 chr14 63122184 63123536 + 1.85127137857412 NA intron (NM_007798, intron 1 of 9) CpG 398 NM_007798 13030 Mm.236553 NM_007798 ENSMUSG00000021939 Ctsb CB cathepsin B protein-coding common_peak2_42_329_-0.320595043991865_8.20602469224988_1.85127137857412-2 chr5 148887618 148889530 + 1.85127137857412 NA intron (NM_153572, intron 9 of 10) intron (NM_153572, intron 9 of 10) 40073 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak2_74_613_-0.231945137080512_9.14612227682992_1.85097478531928 chr15 8098340 8099495 + 1.85097478531928 NA intron (NM_001081402, intron 2 of 17) CpG 292 NM_001081402 545085 Mm.321312 NM_198413 ENSMUSG00000039828 Wdr70 4833422F06Rik WD repeat domain 70 protein-coding common_peak1_161_1210_0.150971244484905_10.3174687719368_1.85067851250516 chr8 83608143 83609358 + 1.85067851250516 NA 5' UTR (NM_001308227, exon 1 of 3) 5' UTR (NM_001308227, exon 1 of 3) 202 NM_001308227 81489 Mm.282092 NM_018808 ENSMUSG00000005483 Dnajb1 0610007I11Rik|DjB1|HSPF1|Hdj1|Hsp40 DnaJ heat shock protein family (Hsp40) member B1 protein-coding common_peak1_235_2311_-0.116174655086139_11.1168383549576_1.84962000756941 chr12 86887405 86889611 + 1.84962000756941 NA Intergenic Intergenic -3694 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_159_1465_-0.146698226943967_10.4443202746618_1.84959406280606 chr15 31600853 31602495 + 1.84959406280606 NA promoter-TSS (NM_026546) promoter-TSS (NM_026546) 130 NM_007637 12465 Mm.282158 NM_007637 ENSMUSG00000022234 Cct5 CCT-epsilon|Ccte|TCP-1-epsilon|TCPE|mKIAA0098 chaperonin containing Tcp1, subunit 5 (epsilon) protein-coding common_peak2_53_282_0.304161635194069_8.29673906042892_1.84875413140105 chr10 14033561 14035165 + 1.84875413140105 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 67984 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak2_53_282_0.304161635194069_8.29673906042892_1.84875413140105-2 chr12 112678398 112679642 + 1.84875413140105 NA intron (NM_001100460, intron 1 of 1) CpG 180 NM_001100460 382639 Mm.11350 NM_001100460 ENSMUSG00000037638 Zbtb42 EG382639|Gm5188|simiRP58 zinc finger and BTB domain containing 42 protein-coding common_peak2_108_722_0.193890398578519_9.59479703624038_1.84776021539635 chr2 140066053 140067640 + 1.84776021539635 NA promoter-TSS (NM_001159641) promoter-TSS (NM_001159641) -41 NR_110351 75812 Mm.293449 NM_175225 ENSMUSG00000039033 Tasp1 4930485D02Rik|AW986064 taspase, threonine aspartase 1 protein-coding common_peak2_171_1307_0.14580496712858_10.4260493090624_1.84711602511473 chr15 76756735 76759664 + 1.84711602511473 NA intron (NM_198420, intron 2 of 10) B2_Mm1t|SINE|B2 -34354 NM_176828 223665 Mm.291713 NM_145472 ENSMUSG00000033707 C030006K11Rik 1110033I13Rik RIKEN cDNA C030006K11 gene protein-coding common_peak1_77_641_-0.226873726328085_9.21299262395826_1.84705480335261 chrX 157491096 157492198 + 1.84705480335261 NA intron (NM_009214, intron 1 of 10) CpG 399 NM_009214 20603 Mm.18652 NM_009214 ENSMUSG00000071708 Sms AI427066|Gy|SPMSY|SpmST|gyro spermine synthase protein-coding common_peak2_272_2363_0.109465238695799_11.2617469395254_1.84698082229722 chr17 32401203 32405150 + 1.84698082229722 NA exon (NM_178785, exon 1 of 17) exon (NM_178785, exon 1 of 17) 162 NR_029458 664702 Mm.381066 NR_029458 A530088E08Rik - RIKEN cDNA A530088E08 gene ncRNA common_peak1_242_2392_-0.114128082392336_11.1675406403423_1.84693379830698 chr2 73484067 73487054 + 1.84693379830698 NA intron (NM_153138, intron 1 of 7) intron (NM_153138, intron 1 of 7) 193 NM_001289723 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak2_73_432_0.248172747671042_8.88230958856225_1.84641264530821 chr7 83631069 83632380 + 1.84641264530821 NA promoter-TSS (NM_023377) promoter-TSS (NM_023377) -293 NM_023377 170460 Mm.357953 NM_023377 ENSMUSG00000046027 Stard5 2310058G22Rik|AI607880|D7Ertd152e StAR-related lipid transfer (START) domain containing 5 protein-coding common_peak2_130_1161_-0.165307091557656_10.0997408076257_1.84620913549917 chr3 131018634 131020599 + 1.84620913549917 NA Intergenic Intergenic -90681 NM_010703 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak1_130_1161_-0.165307091557656_10.0997408076257_1.84620913549917 chr14 31494194 31496274 + 1.84620913549917 NA promoter-TSS (NM_025907) promoter-TSS (NM_025907) 155 NM_028932 74427 Mm.491208 NM_028932 ENSMUSG00000021890 Eaf1 4933403C17Rik|AI666536 ELL associated factor 1 protein-coding common_peak2_103_890_-0.190635754508278_9.70396374426778_1.846068350464 chr9 50767466 50769106 + 1.846068350464 NA promoter-TSS (NM_198675) promoter-TSS (NM_198675) 48 NM_198675 382137 Mm.390169 NM_198675 ENSMUSG00000037845 Fdxacb1 D630004A14Rik ferredoxin-fold anticodon binding domain containing 1 protein-coding common_peak1_103_890_-0.190635754508278_9.70396374426778_1.846068350464 chr3 129724484 129725598 + 1.846068350464 NA promoter-TSS (NM_001310737) promoter-TSS (NM_001310737) 45 NM_001310737 13645 Mm.252481 NM_010113 ENSMUSG00000028017 Egf AI790464 epidermal growth factor protein-coding common_peak2_123_1090_-0.171528559216588_10.0056711067153_1.84599609874671 chr16 17927322 17929050 + 1.84599609874671 NA promoter-TSS (NM_153150) promoter-TSS (NM_153150) 33 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding common_peak1_40_193_0.361530422878298_7.78067805362628_1.8458430921838 chr1 185331706 185332153 + 1.8458430921838 NA promoter-TSS (NM_011794) promoter-TSS (NM_011794) -230 NM_011794 23827 Mm.227549 NM_011794 ENSMUSG00000026617 Bpnt1 BPntase bisphosphate 3'-nucleotidase 1 protein-coding common_peak1_48_380_-0.296770950582637_8.425261712202_1.8457461981175 chr1 65178494 65179121 + 1.8457461981175 NA intron (NM_001111320, intron 1 of 8) intron (NM_001111320, intron 1 of 8) 335 NM_010497 15926 Mm.9925 NM_010497 ENSMUSG00000025950 Idh1 AI314845|AI788952|E030024J03Rik|Id-1|Idh-1|Idpc isocitrate dehydrogenase 1 (NADP+), soluble protein-coding common_peak1_48_380_-0.296770950582637_8.425261712202_1.8457461981175-2 chr1 164965693 164966739 + 1.8457461981175 NA Intergenic Intergenic -30706 NM_008510 16963 Mm.190 NM_008510 ENSMUSG00000026573 Xcl1 AI661682|ATAC|LTN|Lptn|SCM-1|SCM-1a|Scyc1 chemokine (C motif) ligand 1 protein-coding common_peak1_125_873_0.176732001637539_9.85985547031937_1.8451475375144 chr2 51934485 51935548 + 1.8451475375144 NA promoter-TSS (NM_030243) promoter-TSS (NM_030243) -7 NM_001141981 71684 Mm.28309 NM_030243 ENSMUSG00000036249 Rbm43 0610033I05Rik RNA binding motif protein 43 protein-coding common_peak2_141_1020_0.164004706155572_10.0777695039556_1.84478486416237 chr10 59972881 59975793 + 1.84478486416237 NA Intergenic Intergenic -22567 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak1_47_240_0.32749844304849_8.07663855775421_1.84446912558099 chr13 43453015 43454071 + 1.84446912558099 NA intron (NM_019930, intron 2 of 13) intron (NM_019930, intron 2 of 13) 27430 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak1_100_860_-0.193021233791386_9.65335881050115_1.84346355186668 chr8 85432001 85433126 + 1.84346355186668 NA intron (NM_025722, intron 1 of 3) CpG 278 NR_033144 66714 Mm.272748 NM_025722 ENSMUSG00000036934 4921524J17Rik - RIKEN cDNA 4921524J17 gene protein-coding common_peak1_100_860_-0.193021233791386_9.65335881050115_1.84346355186668-2 chrX 12078859 12080163 + 1.84346355186668 NA intron (NM_001168321, intron 1 of 13) CpG 1042 NM_175045 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak2_100_860_-0.193021233791386_9.65335881050115_1.84346355186668 chr11 83270714 83272250 + 1.84346355186668 NA Intergenic Intergenic 15244 NM_001166028 237890 Mm.297670 NM_001166028 ENSMUSG00000082101 Slfn14 Gm20|Slfn14-ps schlafen 14 protein-coding common_peak1_62_503_-0.255670763548133_8.84944454172585_1.84322399019951 chr1 131184775 131185822 + 1.84322399019951 NA intron (NM_018750, intron 2 of 5) intron (NM_018750, intron 2 of 5) 14887 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak1_105_696_0.197339230761045_9.54368446124895_1.84319792677627 chr16 20716739 20717819 + 1.84319792677627 NA promoter-TSS (NM_009900) promoter-TSS (NM_009900) -547 NM_145632 245841 Mm.288730 NM_145632 ENSMUSG00000021018 Polr2h - polymerase (RNA) II (DNA directed) polypeptide H protein-coding common_peak1_510_5226_0.0740876916912043_12.3888112898055_1.84309127956401 chr4 152184673 152189247 + 1.84309127956401 NA intron (NM_001146057, intron 1 of 8) MER21B|LTR|ERVL 826 NM_001146057 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding unique_peak1_15_49_0.652397073350444_5.97005472644995_1.84214145906848 chr16 4075234 4075681 + 1.84214145906848 NA intron (NM_026508, intron 1 of 17) intron (NM_026508, intron 1 of 17) 2353 NM_026508 68015 Mm.123366 NM_026508 ENSMUSG00000005981 Trap1 2410002K23Rik|HSP75 TNF receptor-associated protein 1 protein-coding unique_peak1_15_49_0.652397073350444_5.97005472644995_1.84214145906848-2 chr7 114452716 114453197 + 1.84214145906848 NA intron (NM_011055, intron 1 of 15) intron (NM_011055, intron 1 of 15) 37702 NM_011055 18576 Mm.430730 NM_011055 ENSMUSG00000030671 Pde3b 9830102A01Rik|AI847709 phosphodiesterase 3B, cGMP-inhibited protein-coding common_peak1_15_49_0.652397073350444_5.97005472644995_1.84214145906848 chr14 70064442 70064851 + 1.84214145906848 NA Intergenic MIR3|SINE|MIR -12799 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding common_peak1_15_49_0.652397073350444_5.97005472644995_1.84214145906848-2 chr3 101800636 101801045 + 1.84214145906848 NA Intergenic Intergenic 35383 NM_172295 242125 Mm.32900 NM_172295 ENSMUSG00000044313 Mab21l3 - mab-21-like 3 (C. elegans) protein-coding common_peak2_268_2320_0.109828314224526_11.2354449644567_1.84169037534764 chr4 120824466 120826596 + 1.84169037534764 NA 5' UTR (NM_008692, exon 1 of 10) 5' UTR (NM_008692, exon 1 of 10) 210 NM_001277095 18046 Mm.435590 NM_008692 ENSMUSG00000032897 Nfyc - nuclear transcription factor-Y gamma protein-coding common_peak2_154_1412_-0.149757958721313_10.3896667709733_1.84130300133099 chr14 61735900 61738606 + 1.84130300133099 NA Intergenic Intergenic -54880 NR_028264 668253 Mm.32886 NR_028264 ENSMUSG00000097589 Dleu2 1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2 deleted in lymphocytic leukemia, 2 ncRNA common_peak1_158_1181_0.152861961418866_10.283445300887_1.84128601415574-2 chr8 124264292 124265983 + 1.84128601415574 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 33743 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_158_1181_0.152861961418866_10.283445300887_1.84128601415574 chr3 87929477 87930921 + 1.84128601415574 NA promoter-TSS (NM_177663) promoter-TSS (NM_177663) -4 NM_153562 229503 Mm.296008 NM_153562 ENSMUSG00000004896 Rrnad1 - ribosomal RNA adenine dimethylase domain containing 1 protein-coding common_peak2_40_312_-0.328575581867192_8.12573105599902_1.84056315904324 chr9 33026487 33028202 + 1.84056315904324 NA Intergenic L1MD|LINE|L1 -98378 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak1_40_312_-0.328575581867192_8.12573105599902_1.84056315904324 chr14 99099148 99099870 + 1.84056315904324 NA promoter-TSS (NM_029320) promoter-TSS (NM_029320) 85 NM_029320 52023 Mm.22835 NM_029320 ENSMUSG00000022064 Pibf1 - progesterone immunomodulatory binding factor 1 protein-coding unique_peak2_20_74_0.548655953302617_6.50314666714719_1.84041239157882 chr2 166687389 166688194 + 1.84041239157882 NA intron (NR_105783, intron 2 of 2) intron (NR_105783, intron 2 of 2) 15073 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_20_74_0.548655953302617_6.50314666714719_1.84041239157882-2 chr10 96358682 96359205 + 1.84041239157882 NA Intergenic Intergenic 132736 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_20_74_0.548655953302617_6.50314666714719_1.84041239157882-3 chr15 55851328 55851838 + 1.84041239157882 NA intron (NM_016667, intron 1 of 6) B1_Mus1|SINE|Alu 55366 NM_016667 20649 Mm.309425 NM_016667 ENSMUSG00000060429 Sntb1 - syntrophin, basic 1 protein-coding common_peak1_20_74_0.548655953302617_6.50314666714719_1.84041239157882 chr1 21337124 21337557 + 1.84041239157882 NA Intergenic Intergenic -12337 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak2_120_1059_-0.173281704815114_9.96320769704301_1.84022002339026 chr9 110130766 110132789 + 1.84022002339026 NA promoter-TSS (NM_009211) promoter-TSS (NM_009211) -247 NM_009211 20588 Mm.85410 NM_009211 ENSMUSG00000032481 Smarcc1 AI115498|BAF155|Rsc8|SRG3|msp3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein-coding common_peak2_160_1475_-0.145480092701417_10.4547369597097_1.83855902239904 chrX 10716836 10719678 + 1.83855902239904 NA exon (NM_001166635, exon 2 of 2) exon (NM_001166635, exon 2 of 2) 892 NM_001166635 68041 Mm.29429 NM_026524 ENSMUSG00000008035 Mid1ip1 3110038L01Rik|Mig12|S14R Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) protein-coding common_peak1_285_2508_0.105905902359611_11.345849706589_1.83842057972149 chr3 93554277 93557354 + 1.83842057972149 NA intron (NM_009112, intron 1 of 2) intron (NM_009112, intron 1 of 2) 698 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak2_12_94_-0.641046674876371_6.24933227089276_1.83840428121432 chr6 98992852 98993570 + 1.83840428121432 NA intron (NM_001197321, intron 8 of 17) IMPB_01|Satellite|Satellite 35087 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_12_94_-0.641046674876371_6.24933227089276_1.83840428121432 chr15 66808794 66809744 + 1.83840428121432 NA intron (NM_001029841, intron 1 of 7) intron (NM_001029841, intron 1 of 7) 22560 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding unique_peak2_12_94_-0.641046674876371_6.24933227089276_1.83840428121432-2 chr5 65325880 65326862 + 1.83840428121432 NA intron (NM_011258, intron 1 of 24) intron (NM_011258, intron 1 of 24) 9268 NM_011258 19687 Mm.148877 NM_011258 ENSMUSG00000029191 Rfc1 140kDa|Alp145|RFC140|Recc1 replication factor C (activator 1) 1 protein-coding common_peak1_115_1009_-0.178251640753876_9.89101375726222_1.83822630121626 chr4 133583681 133584984 + 1.83822630121626 NA promoter-TSS (NM_001290742) promoter-TSS (NM_001290742) -41 NM_001290742 100210 Mm.274001 NM_133884 ENSMUSG00000028848 Gpn2 AI838661|Atpbd1b|R74630 GPN-loop GTPase 2 protein-coding common_peak2_164_1239_0.149301129264963_10.3507749699067_1.83820263870039 chr6 134565701 134567782 + 1.83820263870039 NA 5' UTR (NM_008514, exon 1 of 23) 5' UTR (NM_008514, exon 1 of 23) 172 NM_008514 16974 Mm.321990 NM_008514 ENSMUSG00000030201 Lrp6 C030016K15Rik|Cd|Gw|ska26|ska|skax26 low density lipoprotein receptor-related protein 6 protein-coding common_peak2_69_566_-0.239146899232338_9.02763147532606_1.83815743333835 chr18 47338629 47340907 + 1.83815743333835 NA intron (NM_018744, intron 1 of 18) intron (NM_018744, intron 1 of 18) 29100 NM_018744 20358 Mm.40909 NM_018744 ENSMUSG00000019647 Sema6a A730020P05Rik|AI851735|Sema6A-1|Semaq|VIa sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A protein-coding common_peak1_85_528_0.225215569326279_9.15973169677716_1.8374219237759 chr1 36691516 36692147 + 1.8374219237759 NA intron (NM_009942, intron 1 of 3) CpG 344 NM_009942 12859 Mm.180182 NM_009942 ENSMUSG00000061518 Cox5b - cytochrome c oxidase subunit Vb protein-coding common_peak1_194_1537_0.134209248524353_10.653944412224_1.83683926161958 chr15 41788258 41790108 + 1.83683926161958 NA promoter-TSS (NM_130885) promoter-TSS (NM_130885) 149 NM_001130165 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_194_1537_0.134209248524353_10.653944412224_1.83683926161958 chr4 31963045 31964982 + 1.83683926161958 NA promoter-TSS (NM_172688) promoter-TSS (NM_172688) -94 NM_009316 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_65_371_0.264773447739206_8.67154553497763_1.83654735281599 chr17 71203893 71205467 + 1.83654735281599 NA promoter-TSS (NM_001164885) promoter-TSS (NM_001164885) 26 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak1_39_187_0.363157687139495_7.73616769524739_1.83641877785501 chr1 189007148 189007909 + 1.83641877785501 NA intron (NM_172650, intron 1 of 17) CpG 312 NM_172650 226823 Mm.209880 NM_172650 ENSMUSG00000026608 Kctd3 4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45 potassium channel tetramerisation domain containing 3 protein-coding common_peak1_39_187_0.363157687139495_7.73616769524739_1.83641877785501-2 chr7 145283371 145284015 + 1.83641877785501 NA intron (NR_132644, intron 1 of 24) intron (NR_132644, intron 1 of 24) 318 NR_132644 233979 Mm.102235 NM_146206 ENSMUSG00000048677 Tpcn2 D830047E22Rik|Gm35086 two pore segment channel 2 protein-coding common_peak1_122_1079_-0.171237815832121_9.99119668913477_1.83622608009403 chr12 112828473 112829779 + 1.83622608009403 NA 5' UTR (NM_028023, exon 1 of 2) 5' UTR (NM_028023, exon 1 of 2) 263 NM_028023 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding common_peak1_61_341_0.275442001034765_8.55557351540328_1.83611270242657 chr16 13819196 13819818 + 1.83611270242657 NA intron (NM_010946, intron 1 of 9) CpG 230 NM_010946 18203 Mm.380410 NM_010946 ENSMUSG00000022681 Ntan1 PNAA|PNAD N-terminal Asn amidase protein-coding common_peak2_61_341_0.275442001034765_8.55557351540328_1.83611270242657 chr5 107946049 107947489 + 1.83611270242657 NA intron (NM_026062, intron 1 of 4) intron (NM_026062, intron 1 of 4) 40308 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding unique_peak2_52_414_-0.281225760791175_8.5563546458387_1.83611270242657 chr6 35255914 35258137 + 1.83611270242657 NA intron (NR_027875, intron 1 of 2) intron (NR_027875, intron 1 of 2) 4293 NR_027875 67705 Mm.228046 NR_015608 ENSMUSG00000073155 1810058I24Rik AI414869|AI848234 RIKEN cDNA 1810058I24 gene ncRNA common_peak1_79_659_-0.221963364242328_9.25534053212465_1.83565429588021 chr7 140878722 140879934 + 1.83565429588021 NA intron (NM_022433, intron 1 of 6) intron (NM_022433, intron 1 of 6) 2541 NM_001127351 64384 Mm.29760 NM_022433 ENSMUSG00000025486 Sirt3 2310003L23Rik|AI848213|Sir2l3 sirtuin 3 protein-coding common_peak1_117_802_0.182882538710867_9.74069744687275_1.83503713871704 chr13 67374926 67376257 + 1.83503713871704 NA intron (NM_001001186, intron 1 of 3) intron (NM_001001186, intron 1 of 3) 172 NM_001001186 408065 Mm.461583 NM_001001186 ENSMUSG00000078995 Zfp456 BC065418|Rslcan-13 zinc finger protein 456 protein-coding common_peak1_322_3349_-0.0958489342411788_11.6620209131119_1.83500304137087 chr8 120715314 120718095 + 1.83500304137087 NA Intergenic Intergenic -19654 NM_008320 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding unique_peak2_38_180_0.373097562524655_7.68639466834553_1.83486852906869 chr4 149667969 149669700 + 1.83486852906869 NA intron (NM_001164050, intron 2 of 23) intron (NM_001164050, intron 2 of 23) -5518 NM_001164052 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_38_180_0.373097562524655_7.68639466834553_1.83486852906869-2 chr9 124142471 124143193 + 1.83486852906869 NA Intergenic RMER17D|LTR|ERVK 21289 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak1_38_180_0.373097562524655_7.68639466834553_1.83486852906869 chr11 78751238 78751810 + 1.83486852906869 NA exon (NM_197989, exon 1 of 1) exon (NM_197989, exon 1 of 1) 205 NM_197989 69109 Mm.341420 NM_197989 ENSMUSG00000049489 Fam58b 1810009O10Rik|Fam58a family with sequence similarity 58, member B protein-coding common_peak1_15_116_-0.574111456458237_6.58330899135429_1.83479689671668 chr19 3870402 3870815 + 1.83479689671668 NA intron (NM_013490, intron 2 of 10) intron (NM_013490, intron 2 of 10) 18835 NR_073190 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding unique_peak2_15_116_-0.574111456458237_6.58330899135429_1.83479689671668 chr1 125420105 125421019 + 1.83479689671668 NA intron (NM_023735, intron 1 of 11) intron (NM_023735, intron 1 of 11) 15165 NM_023735 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak1_21_79_0.537869647806589_6.59086291879066_1.83479689671668 chr6 65661774 65662332 + 1.83479689671668 NA Intergenic Intergenic -9558 NM_172399 68169 Mm.52392 NM_172399 ENSMUSG00000049001 Ndnf A930038C07Rik|epidermacan neuron-derived neurotrophic factor protein-coding common_peak2_99_645_0.203849459815171_9.43731508460151_1.83455462926709 chr14 105270970 105273974 + 1.83455462926709 NA intron (NM_001190989, intron 1 of 7) intron (NM_001190989, intron 1 of 7) 13799 NM_001190989 76273 Mm.290669 NM_029561 ENSMUSG00000053253 Ndfip2 0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165 Nedd4 family interacting protein 2 protein-coding common_peak1_20_153_-0.489311896896403_7.0221305922467_1.83454128498202 chr3 96273387 96273911 + 1.83454128498202 NA Intergenic Intergenic 3949 NM_175666 319189 Mm.297655 NM_175666 ENSMUSG00000105827 Hist2h2bb H2b-616 histone cluster 2, H2bb protein-coding common_peak1_190_1802_-0.131812175445548_10.7502775937096_1.83417953572112 chr16 17451262 17452870 + 1.83417953572112 NA promoter-TSS (NM_007764) promoter-TSS (NM_007764) 81 NM_007764 12929 Mm.21048 NM_007764 ENSMUSG00000006134 Crkl 1110025F07Rik|AA589403|AI325100|Crkol v-crk avian sarcoma virus CT10 oncogene homolog-like protein-coding common_peak2_65_530_-0.248635791956916_8.92825015482569_1.83402073452633 chr5 135743375 135745011 + 1.83402073452633 NA promoter-TSS (NM_172541) promoter-TSS (NM_172541) -21 NM_172541 215210 Mm.11688 NM_172541 ENSMUSG00000039886 Tmem120a 2010310D06Rik|Tmpit transmembrane protein 120A protein-coding common_peak1_182_1713_-0.134497426912244_10.6759026806564_1.83394804132162 chr7 120850673 120852601 + 1.83394804132162 NA intron (NM_001267711, intron 1 of 17) intron (NM_001267711, intron 1 of 17) 448 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding unique_peak2_39_304_-0.334918893633116_8.08520598563369_1.83311269573665 chr15 99340414 99342062 + 1.83311269573665 NA intron (NM_001310623, intron 1 of 24) MTD|LTR|ERVL-MaLR 29244 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_39_304_-0.334918893633116_8.08520598563369_1.83311269573665 chr17 15527397 15527933 + 1.83311269573665 NA promoter-TSS (NM_008799) promoter-TSS (NM_008799) -364 NM_008799 18567 Mm.323 NM_008799 ENSMUSG00000014771 Pdcd2 AI528543|Pcd2|RP-8 programmed cell death 2 protein-coding common_peak1_99_850_-0.193775507176868_9.63612756809753_1.83281659354303 chr11 97149360 97150930 + 1.83281659354303 NA promoter-TSS (NM_198100) promoter-TSS (NM_198100) -433 NM_198100 73174 Mm.27882 NM_198100 ENSMUSG00000038517 Tbkbp1 3110043L15Rik|ProSAPiP2|SINTBAD TBK1 binding protein 1 protein-coding common_peak1_298_2654_0.102969573476827_11.4259809324299_1.83219564029119 chr6 117915433 117918602 + 1.83219564029119 NA promoter-TSS (NM_001166427) promoter-TSS (NM_001166427) -277 NM_001166427 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak2_153_1134_0.154857269781145_10.2259052170688_1.83213426034278 chr4 143211657 143213587 + 1.83213426034278 NA promoter-TSS (NM_001256380) promoter-TSS (NM_001256380) 87 NM_001081355 110593 Mm.332020 NM_001081355 ENSMUSG00000057637 Prdm2 4833427P12Rik|E330024L24Rik|Gm1033|Gm19732|KMT8|Riz|Riz1|Znfpr1c1 PR domain containing 2, with ZNF domain protein-coding common_peak1_46_234_0.326614140861018_8.03982401699551_1.83185254282845 chr6 118065911 118066778 + 1.83185254282845 NA promoter-TSS (NM_027526) promoter-TSS (NM_027526) -41 NM_027526 70727 Mm.87660 NM_027526 ENSMUSG00000030134 Rasgef1a 6330404M18Rik|AI835194 RasGEF domain family, member 1A protein-coding common_peak1_38_295_-0.336509916021089_8.0411984076184_1.83185254282845-2 chr12 25186470 25187152 + 1.83185254282845 NA Intergenic MTEa|LTR|ERVL-MaLR 57637 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_38_295_-0.336509916021089_8.0411984076184_1.83185254282845 chr11 32551440 32552161 + 1.83185254282845 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 18534 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_233_1942_0.119620091362156_10.9838802312664_1.83168402995937 chr5 111175922 111179665 + 1.83168402995937 NA intron (NM_001267622, intron 5 of 22) intron (NM_001267622, intron 5 of 22) -152904 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak1_21_160_-0.471119135420666_7.09535731040428_1.83072612419323-2 chr19 10276741 10277419 + 1.83072612419323 NA intron (NM_198114, intron 1 of 19) intron (NM_198114, intron 1 of 19) 27797 NM_198114 269060 Mm.329718 NM_198114 ENSMUSG00000035735 Dagla Nsddr diacylglycerol lipase, alpha protein-coding common_peak1_21_160_-0.471119135420666_7.09535731040428_1.83072612419323 chr11 72953455 72953916 + 1.83072612419323 NA Intergenic Intergenic -7484 NM_016745 53313 Mm.6306 NM_016745 ENSMUSG00000020788 Atp2a3 SERCA3b|Serca3 ATPase, Ca++ transporting, ubiquitous protein-coding common_peak1_119_820_0.180642643192611_9.77155973337411_1.83002255945822 chr12 100186756 100187528 + 1.83002255945822 NA promoter-TSS (NR_045282) promoter-TSS (NR_045282) -826 NR_045282 100038378 Mm.387075 NR_045282 ENSMUSG00000072884 Gm10433 ENSMUSG00000072884 predicted gene 10433 ncRNA common_peak2_46_363_-0.304663552772679_8.35546286381236_1.82972874624787 chr11 30648818 30649787 + 1.82972874624787 NA promoter-TSS (NM_029344) promoter-TSS (NM_029344) 94 NM_029344 75572 Mm.390319 NM_029344 ENSMUSG00000060923 Acyp2 2310004B09Rik acylphosphatase 2, muscle type protein-coding common_peak1_157_1443_-0.147143624587498_10.4222832145934_1.82898560450509 chr3 108443900 108445799 + 1.82898560450509 NA intron (NM_011319, intron 1 of 11) CpG 410 NM_011319 20226 Mm.28688 NM_011319 ENSMUSG00000068739 Sars Sars1|Strs|serRS seryl-aminoacyl-tRNA synthetase protein-coding common_peak2_109_948_-0.182360947448839_9.79908380329669_1.82888152416451 chr8 71370202 71372374 + 1.82888152416451 NA promoter-TSS (NR_122030) promoter-TSS (NR_122030) -10 NM_029865 77090 Mm.440170 NM_029865 ENSMUSG00000002396 Ocel1 9430098E02Rik|AI326022|AI593544 occludin/ELL domain containing 1 protein-coding common_peak2_68_394_0.256886477182329_8.75415208165563_1.82864650821518 chr11 77492631 77494400 + 1.82864650821518 NA 5' UTR (NM_001004144, exon 1 of 20) 5' UTR (NM_001004144, exon 1 of 20) 103 NM_001004144 216963 Mm.290182 NM_001004144 ENSMUSG00000011877 Git1 Cat-1|p95Cat G protein-coupled receptor kinase-interactor 1 protein-coding common_peak1_93_792_-0.201433657091604_9.53046022715818_1.82666219788461 chr7 24529752 24531251 + 1.82666219788461 NA promoter-TSS (NM_153134) promoter-TSS (NM_153134) -147 NM_153134 210146 Mm.41108 NM_153134 ENSMUSG00000041037 Irgq AF322649|FKSG27|Irgq1 immunity-related GTPase family, Q protein-coding unique_peak2_37_174_0.375765402750917_7.63909381320779_1.82660362023854 chr17 29078128 29079133 + 1.82660362023854 NA intron (NR_036469, intron 1 of 1) ID_B1|SINE|B4 496 NR_036469 100504267 Mm.438550 NR_036469 ENSMUSG00000085912 Trp53cor1 Gm16197|OTTMUSG00000031656|linc-p21|lincRNA-p21 tumor protein p53 pathway corepressor 1 ncRNA common_peak1_37_174_0.375765402750917_7.63909381320779_1.82660362023854 chr8 128549224 128549783 + 1.82660362023854 NA Intergenic B4A|SINE|B4 -136151 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_195_1548_0.132979430493828_10.6636111440365_1.82642587145483 chr11 62647409 62649927 + 1.82642587145483 NA promoter-TSS (NM_198861) promoter-TSS (NM_198861) 4 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding unique_peak2_8_66_-0.78801613977146_5.67208112057204_1.82572255783529 chr19 17265190 17265731 + 1.82572255783529 NA Intergenic Intergenic 74045 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_51_269_0.305217958776456_8.22942457643906_1.82546139624361 chr2 32542243 32543164 + 1.82546139624361 NA intron (NM_153560, intron 1 of 10) intron (NM_153560, intron 1 of 10) 7344 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak1_51_269_0.305217958776456_8.22942457643906_1.82546139624361-2 chr8 61223701 61224491 + 1.82546139624361 NA promoter-TSS (NM_021506) promoter-TSS (NM_021506) -75 NM_021506 59009 Mm.27949 NM_021506 ENSMUSG00000031642 Sh3rf1 2200003J05Rik|Posh|R75531|Sh3md2 SH3 domain containing ring finger 1 protein-coding common_peak1_121_838_0.178604761793505_9.80182938133658_1.82545902514099 chr12 84996256 84997406 + 1.82545902514099 NA exon (NM_178363, exon 1 of 21) exon (NM_178363, exon 1 of 21) 510 NM_178363 56531 Mm.153183 NM_178363 ENSMUSG00000021244 Ylpm1 A930013E17Rik|ZAP|Zap3 YLP motif containing 1 protein-coding common_peak1_90_763_-0.205083785315701_9.4748869353779_1.82505221884132 chr9 50767614 50768555 + 1.82505221884132 NA promoter-TSS (NM_198675) promoter-TSS (NM_198675) 68 NM_023483 68721 Mm.171374 NM_023483 ENSMUSG00000037971 1110032A03Rik 4930500N06Rik|c11orf1 RIKEN cDNA 1110032A03 gene protein-coding common_peak1_488_4946_0.07564077591603_12.3101585721166_1.82499813334211 chr8 25600975 25603555 + 1.82499813334211 NA promoter-TSS (NM_001001735) promoter-TSS (NM_001001735) -19 NM_001001735 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Whsc1l1 6720429E03|A530023P05|AI528490|NSD3|WHISTLE Wolf-Hirschhorn syndrome candidate 1-like 1 (human) protein-coding common_peak2_121_1069_-0.172263319055181_9.97726342176092_1.82495518662353 chr2 94405556 94407500 + 1.82495518662353 NA promoter-TSS (NR_027831) promoter-TSS (NR_027831) 161 NM_183106 74569 Mm.248504 NM_183106 ENSMUSG00000027194 Ttc17 9130020K17Rik|D2Bwg1005e tetratricopeptide repeat domain 17 protein-coding common_peak2_45_354_-0.30660209911218_8.31837416483596_1.82451941449885 chr13 113053349 113055372 + 1.82451941449885 NA intron (NM_001281487, intron 2 of 11) intron (NM_001281487, intron 2 of 11) -7972 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak1_45_354_-0.30660209911218_8.31837416483596_1.82451941449885 chr13 20092826 20093551 + 1.82451941449885 NA intron (NM_080288, intron 1 of 21) intron (NM_080288, intron 1 of 21) 2681 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding common_peak1_411_4472_-0.0822545368551477_12.085899774577_1.82451137417244 chr2 24384400 24387663 + 1.82451137417244 NA intron (NM_177611, intron 1 of 16) B1_Mus1|SINE|Alu 634 NM_177611 215632 Mm.490434 NM_177611 ENSMUSG00000026979 Psd4 BC046518|EFA6B pleckstrin and Sec7 domain containing 4 protein-coding common_peak1_324_2951_0.0975431011508192_11.5762485566358_1.8244091829038 chr4 101263572 101265601 + 1.8244091829038 NA intron (NM_146145, intron 1 of 24) CpG 696 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_64_364_0.265161866565517_8.64433358705014_1.82436168960779 chr7 43399092 43400900 + 1.82436168960779 NA Intergenic L2|LINE|L2 -8284 NM_172900 243958 Mm.24444 NM_172900 ENSMUSG00000030468 Siglecg 9830164H23|A630096C01Rik|Siglec-G|Siglec10|mSiglec-G sialic acid binding Ig-like lectin G protein-coding common_peak2_171_1593_-0.139484121363809_10.5686938533086_1.82421802400564 chr2 30132225 30134983 + 1.82421802400564 NA promoter-TSS (NM_146252) promoter-TSS (NM_146252) -267 NM_146252 70296 Mm.19172 NM_146252 ENSMUSG00000039678 Tbc1d13 2600014A06Rik|BC025586 TBC1 domain family, member 13 protein-coding common_peak1_116_793_0.184082768618188_9.72503658145205_1.82416124802724 chr10 88428306 88429537 + 1.82416124802724 NA intron (NM_001004164, intron 8 of 20) B3A|SINE|B2 -30666 NM_011517 20962 Mm.297977 NM_011517 ENSMUSG00000020059 Sycp3 Cor1|Scp3 synaptonemal complex protein 3 protein-coding common_peak1_60_485_-0.260293052558808_8.79466597732638_1.8240346898545 chr1 43240350 43241375 + 1.8240346898545 NA Intergenic Intergenic -44101 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_179_1387_0.140611407359083_10.5090975562578_1.82390425897386 chr16 37538978 37540543 + 1.82390425897386 NA promoter-TSS (NM_028812) promoter-TSS (NM_028812) 9 NM_028812 74197 Mm.287795 NM_028812 ENSMUSG00000022828 Gtf2e1 2610024P03Rik|56kDa|AI303800|FE|TFIIE-A general transcription factor II E, polypeptide 1 (alpha subunit) protein-coding common_peak2_71_417_0.250550852164496_8.83263455816313_1.82348325634402 chr17 35469206 35471507 + 1.82348325634402 NA intron (NM_010391, intron 1 of 6) CpG 267 NM_010391 15007 Mm.88795 NM_010391 ENSMUSG00000067235 H2-Q10 H-2Q10|Q10|Qa10 histocompatibility 2, Q region locus 10 protein-coding common_peak1_376_3562_0.0887914614541021_11.8432724988604_1.82342955939187 chr18 7868047 7870519 + 1.82342955939187 NA promoter-TSS (NM_001146298) promoter-TSS (NM_001146298) 86 NM_153085 225131 Mm.204524 NM_153085 ENSMUSG00000024283 Wac 1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4 WW domain containing adaptor with coiled-coil protein-coding common_peak2_71_584_-0.234382830225387_9.07510139935807_1.82310805900687 chr5 139206509 139209481 + 1.82310805900687 NA intron (NM_024451, intron 1 of 22) intron (NM_024451, intron 1 of 22) -7163 NM_001256118 77053 Mm.210845 NM_024451 ENSMUSG00000036817 Sun1 4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810 Sad1 and UNC84 domain containing 1 protein-coding common_peak2_98_637_0.204041850049295_9.41943353878952_1.82235587050207 chr10 39384899 39388930 + 1.82235587050207 NA intron (NM_008054, intron 1 of 13) intron (NM_008054, intron 1 of 13) 17115 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_139_1253_-0.157651295905794_10.2134959848491_1.82199050267178 chr7 24971730 24972917 + 1.82199050267178 NA intron (NM_010261, intron 1 of 4) intron (NM_010261, intron 1 of 4) 405 NM_010261 14470 Mm.22473 NM_010261 ENSMUSG00000003380 Rabac1 2310040I06Rik|Gbpap1|PRA1|prenylin Rab acceptor 1 (prenylated) protein-coding common_peak2_206_1979_-0.124554878566894_10.8890072756835_1.82175733647078 chr14 54685523 54687899 + 1.82175733647078 NA exon (NM_001085473, exon 1 of 19) exon (NM_001085473, exon 1 of 19) 220 NM_001085473 56215 Mm.297078 NM_019567 ENSMUSG00000022185 Acin1 2610036I19Rik|2610510L13Rik|Acinus|Acn|C79325|acinusL|acinusS|mKIAA0670 apoptotic chromatin condensation inducer 1 protein-coding common_peak1_152_1125_0.154814181200511_10.2143982026805_1.82071059127428 chr8 72547517 72549247 + 1.82071059127428 NA promoter-TSS (NM_027485) promoter-TSS (NM_027485) -72 NM_027485 70625 Mm.235885 NM_027485 ENSMUSG00000045248 Med26 5730493L18Rik|AI414941|AW495270|Crsp7 mediator complex subunit 26 protein-coding common_peak1_55_440_-0.27145778435324_8.6489059533809_1.8205659895703 chr6 143750901 143752031 + 1.8205659895703 NA Intergenic Intergenic -100178 NR_045732 73425 Mm.417844 NR_045732 ENSMUSG00000086887 1700060C16Rik - RIKEN cDNA 1700060C16 gene ncRNA common_peak1_35_161_0.391447670174399_7.53557383797182_1.81999267171156 chr3 90603429 90604046 + 1.81999267171156 NA promoter-TSS (NM_011311) promoter-TSS (NM_011311) -33 NM_011311 20198 Mm.3925 NM_011311 ENSMUSG00000001020 S100a4 18A2|42a|Capl|FSp1|Mts1|PeL98|metastasin|pk9a S100 calcium binding protein A4 protein-coding common_peak2_35_161_0.391447670174399_7.53557383797182_1.81999267171156 chr8 123162605 123163834 + 1.81999267171156 NA Intergenic MTEb|LTR|ERVL-MaLR -4939 NM_020564 57429 Mm.6562 NM_020564 ENSMUSG00000000739 Sult5a1 Sult-x1|Sultx1 sulfotransferase family 5A, member 1 protein-coding unique_peak2_36_279_-0.349499365733557_7.95453333407819_1.81938806013797 chr1 161712253 161713808 + 1.81938806013797 NA Intergenic Intergenic 75465 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_36_279_-0.349499365733557_7.95453333407819_1.81938806013797 chr3 89195888 89196562 + 1.81938806013797 NA Intergenic Intergenic -6700 NM_001077411 14466 Mm.5031 NM_008094 ENSMUSG00000028048 Gba GBA1|GC|GCase|GLUC|betaGC glucosidase, beta, acid protein-coding common_peak2_44_220_0.3382760781732_7.95704059847803_1.81938806013797 chrX 112311204 112312065 + 1.81938806013797 NA intron (NM_001313734, intron 1 of 6) intron (NM_001313734, intron 1 of 6) 282 NM_026565 68117 Mm.161014 NM_026565 ENSMUSG00000025525 Apool 6720473G16Rik|9430083G14Rik|E130106L15Rik apolipoprotein O-like protein-coding common_peak1_103_889_-0.189015658840116_9.7031536964337_1.81873889874028 chr2 31143350 31144573 + 1.81873889874028 NA Intergenic Intergenic -1953 NM_001038700 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak2_103_889_-0.189015658840116_9.7031536964337_1.81873889874028 chr13 74563236 74565089 + 1.81873889874028 NA Intergenic Intergenic -70212 NM_146231 235956 Mm.296909 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak1_330_3021_0.0961042994972416_11.6093400949134_1.81870342982715 chr7 16842636 16845925 + 1.81870342982715 NA intron (NM_001252458, intron 2 of 18) intron (NM_001252458, intron 2 of 18) 1215 NM_178900 101540 Mm.1881 NM_178900 ENSMUSG00000041187 Prkd2 AI325941|PKD2 protein kinase D2 protein-coding common_peak1_95_612_0.207256826774026_9.36337167707779_1.81845187783705 chr10 22305884 22307348 + 1.81845187783705 NA promoter-TSS (NR_015465) promoter-TSS (NR_015465) -104 NR_015465 606736 Mm.387042 NR_015465 ENSMUSG00000097352 C920009B18Rik - RIKEN cDNA C920009B18 gene ncRNA unique_peak2_23_175_-0.445656150545203_7.2366035433647_1.81831040915782-2 chr6 124805068 124806356 + 1.81831040915782 NA Intergenic CpG -2949 NM_001306051 14794 Mm.261906 NM_013539 ENSMUSG00000038451 Spsb2 AI461677|C9|Grcc9|SSB2 splA/ryanodine receptor domain and SOCS box containing 2 protein-coding unique_peak2_23_175_-0.445656150545203_7.2366035433647_1.81831040915782 chr2 45023407 45024751 + 1.81831040915782 NA promoter-TSS (NR_039591) promoter-TSS (NR_039591) -902 NR_039591 100628598 NR_039591 ENSMUSG00000092679 Mir5129 mir-5129|mmu-mir-5129|mu-mir-5129 microRNA 5129 ncRNA common_peak1_23_175_-0.445656150545203_7.2366035433647_1.81831040915782 chr8 70754018 70754581 + 1.81831040915782 NA promoter-TSS (NM_009001) promoter-TSS (NM_009001) -380 NM_009001 19339 Mm.5083 NM_009001 ENSMUSG00000031840 Rab3a - RAB3A, member RAS oncogene family protein-coding common_peak2_23_175_-0.445656150545203_7.2366035433647_1.81831040915782 chr16 78502315 78503429 + 1.81831040915782 NA Intergenic Intergenic -57444 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak1_22_168_-0.462418632188674_7.16967012018785_1.8181869759743 chr6 136930463 136930958 + 1.8181869759743 NA intron (NM_001301308, intron 2 of 4) intron (NM_001301308, intron 2 of 4) -8530 NM_026983 69187 Mm.33692 NM_026983 ENSMUSG00000030219 Erp27 1810033M07Rik|1810047B09Rik endoplasmic reticulum protein 27 protein-coding common_peak2_74_612_-0.229593555401115_9.14494648599022_1.81802586937468 chr10 40882411 40883572 + 1.81802586937468 NA promoter-TSS (NM_031877) promoter-TSS (NM_031877) 152 NM_027879 71713 Mm.46063 NM_027879 ENSMUSG00000038446 Cdc40 1200003H23Rik|EHB3|PRP17 cell division cycle 40 protein-coding unique_peak2_10_80_-0.706664571377028_5.98651771719611_1.81799280824916 chr14 61518195 61518830 + 1.81799280824916 NA Intergenic (TTTTC)n|Simple_repeat|Simple_repeat 25824 NR_045714 75349 Mm.233613 NR_045714 4930556J02Rik - RIKEN cDNA 4930556J02 gene ncRNA common_peak1_50_397_-0.288953843416193_8.49214769883555_1.8174967238814 chr3 14887589 14888326 + 1.8174967238814 NA exon (NM_009801, exon 2 of 7) exon (NM_009801, exon 2 of 7) 1531 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding common_peak2_50_397_-0.288953843416193_8.49214769883555_1.8174967238814 chr10 62979705 62980982 + 1.8174967238814 NA intron (NM_027425, intron 1 of 17) CpG 120 NM_027425 70432 Mm.234587 NM_027425 ENSMUSG00000020070 Rufy2 2610111M19Rik|AI844453|Denn|LZ-FYVE|ZFYVE13 RUN and FYVE domain-containing 2 protein-coding common_peak2_160_1474_-0.144502325777587_10.4542480762478_1.8173586840884 chr14 16248632 16250527 + 1.8173586840884 NA 5' UTR (NM_027695, exon 1 of 3) 5' UTR (NM_027695, exon 1 of 3) 229 NM_027695 71147 Mm.197960 NM_027695 ENSMUSG00000021786 Oxsm 4933425A18Rik|C80494 3-oxoacyl-ACP synthase, mitochondrial protein-coding common_peak1_23_90_0.505980827893398_6.7607850541454_1.81723637423224 chr2 119618079 119618486 + 1.81723637423224 NA promoter-TSS (NM_133851) promoter-TSS (NM_133851) -16 NM_133851 108907 Mm.290015 NM_133851 ENSMUSG00000027306 Nusap1 2610201A12Rik|AI481307|ANKT|AW547774|BB165529|BM037|LNP|NuSAP|Q0310|SAPL nucleolar and spindle associated protein 1 protein-coding common_peak1_23_90_0.505980827893398_6.7607850541454_1.81723637423224-2 chr5 38684436 38684894 + 1.81723637423224 NA intron (NM_001081144, intron 1 of 3) CpG 161 NM_001081144 100515 Mm.38277 NM_001081144 ENSMUSG00000046572 Zfp518b 6820424L24Rik|AA410078|AI661722|Znf518b zinc finger protein 518B protein-coding unique_peak2_23_90_0.505980827893398_6.7607850541454_1.81723637423224 chr1 190911339 190911992 + 1.81723637423224 NA 5' UTR (NM_178775, exon 1 of 15) 5' UTR (NM_178775, exon 1 of 15) 105 NM_178775 320119 Mm.220912 NM_178775 ENSMUSG00000089872 Rps6kc1 AA682037|B130003F20Rik|C80612|Rpk118 ribosomal protein S6 kinase polypeptide 1 protein-coding unique_peak1_23_90_0.505980827893398_6.7607850541454_1.81723637423224 chr15 75893871 75894381 + 1.81723637423224 NA TTS (NM_023240) TTS (NM_023240) 355 NM_172607 223646 Mm.288368 NM_172607 ENSMUSG00000022574 Naprt 9130210N20Rik|Naprt1 nicotinate phosphoribosyltransferase protein-coding common_peak1_143_1295_-0.155327707452889_10.2621861491582_1.81718635059668 chr7 106439761 106442094 + 1.81718635059668 NA intron (NR_003967, intron 1 of 2) intron (NR_003967, intron 1 of 2) 146 NR_003967 209380 Mm.461779 NM_001001318 Gm4759 EG209380 GTPase, very large interferon inducible 1 pseudogene pseudo unique_peak2_22_85_0.512196049391412_6.6823627793978_1.81703281427848-2 chr8 84908538 84909153 + 1.81703281427848 NA exon (NM_010062, exon 1 of 6) exon (NM_010062, exon 1 of 6) 221 NM_010062 13423 Mm.350831 NM_010062 ENSMUSG00000003812 Dnase2a Dnase2 deoxyribonuclease II alpha protein-coding common_peak1_22_85_0.512196049391412_6.6823627793978_1.81703281427848-2 chr6 99388873 99389456 + 1.81703281427848 NA intron (NM_053202, intron 1 of 18) intron (NM_053202, intron 1 of 18) 46181 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_22_85_0.512196049391412_6.6823627793978_1.81703281427848 chr1 180358717 180359395 + 1.81703281427848 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -28507 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_22_85_0.512196049391412_6.6823627793978_1.81703281427848 chr17 48419117 48419457 + 1.81703281427848 NA TTS (NM_009694) TTS (NM_009694) 9287 NM_207219 106821 Mm.203943 NM_207219 ENSMUSG00000040771 Oard1 AI314976|AW558560 O-acyl-ADP-ribose deacylase 1 protein-coding unique_peak2_22_85_0.512196049391412_6.6823627793978_1.81703281427848-3 chrX 53607783 53608454 + 1.81703281427848 NA exon (NM_028375, exon 1 of 2) exon (NM_028375, exon 1 of 2) 196 NM_028375 72865 Mm.158897 NM_028375 ENSMUSG00000051851 Cxx1c 2900027G03Rik|Mar8.1|Mart8a CAAX box 1C protein-coding unique_peak2_16_123_-0.550660049412703_6.67886628568052_1.81703281427846 chr10 20347539 20348126 + 1.81703281427846 NA promoter-TSS (NM_027930) promoter-TSS (NM_027930) 13 NM_027930 71804 Mm.262151 NM_027930 ENSMUSG00000019992 Mtfr2 2610016C23Rik|4933412C16Rik|Dufd1|Fam54a mitochondrial fission regulator 2 protein-coding common_peak1_16_123_-0.550660049412703_6.67886628568052_1.81703281427846 chrX 85869210 85869653 + 1.81703281427846 NA promoter-TSS (NM_001163539) promoter-TSS (NM_001163539) -842 NM_001163539 71398 Mm.185296 NM_001163539 ENSMUSG00000025058 5430427O19Rik - RIKEN cDNA 5430427O19 gene protein-coding common_peak1_67_548_-0.243901455658316_8.97871161117604_1.81679598068612 chr1 165461238 165462060 + 1.81679598068612 NA intron (NM_027430, intron 1 of 4) intron (NM_027430, intron 1 of 4) 441 NM_027430 70456 Mm.195625 NM_027430 ENSMUSG00000026568 Mpc2 0610006C01Rik|2010002I07Rik|2610205H19Rik|AA108335|Brp44|ESTM43 mitochondrial pyruvate carrier 2 protein-coding unique_peak2_50_262_0.308751787835154_8.19329488320988_1.81667566123692 chr9 66225228 66227051 + 1.81667566123692 NA intron (NM_010019, intron 3 of 11) RMER10A|LTR|ERVL 67913 NM_010019 13143 Mm.304472 NM_010019 ENSMUSG00000032380 Dapk2 - death-associated protein kinase 2 protein-coding common_peak1_63_356_0.269697621468781_8.61462907476349_1.81612057814412 chr2 170169002 170169789 + 1.81612057814412 NA Intergenic Intergenic -26720 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_213_1733_0.125694547320295_10.822735456882_1.81591579133836 chr11 32542857 32544549 + 1.81591579133836 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 10437 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_244_2413_-0.112228136966017_11.181095892272_1.81573764819112 chr2 83723170 83725566 + 1.81573764819112 NA promoter-TSS (NM_008402) promoter-TSS (NM_008402) -29 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak1_145_1316_-0.154108292684528_10.2859854839142_1.81516339137857 chr17 12915488 12917144 + 1.81516339137857 NA promoter-TSS (NM_001290712) promoter-TSS (NM_001290712) -13 NM_001290712 21454 Mm.229342 NM_013686 ENSMUSG00000068039 Tcp1 AI528772|CCT|Cct1|Ccta|TRic|Tcp-1|Tp63|c-cpn|p63 t-complex protein 1 protein-coding common_peak1_16_54_0.622176547449512_6.09244798724942_1.81501387379333-2 chr14 121885264 121885659 + 1.81501387379333 NA intron (NM_026861, intron 1 of 8) MTC|LTR|ERVL-MaLR -6053 NR_130999 78312 Mm.188743 NR_130999 ENSMUSG00000102112 1810041H14Rik - RIKEN cDNA 1810041H14 gene ncRNA common_peak1_16_54_0.622176547449512_6.09244798724942_1.81501387379333-3 chr18 79089693 79090225 + 1.81501387379333 NA intron (NM_053099, intron 1 of 5) intron (NM_053099, intron 1 of 5) 19432 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_16_54_0.622176547449512_6.09244798724942_1.81501387379333-4 chr8 122906089 122906514 + 1.81501387379333 NA intron (NR_037865, intron 4 of 13) intron (NR_037865, intron 4 of 13) 57927 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding common_peak1_16_54_0.622176547449512_6.09244798724942_1.81501387379333 chr13 52892210 52892581 + 1.81501387379333 NA intron (NM_016709, intron 4 of 9) intron (NM_016709, intron 4 of 9) 37282 NM_016709 11992 Mm.252034 NM_016709 ENSMUSG00000021460 Auh C77140|W91705 AU RNA binding protein/enoyl-coenzyme A hydratase protein-coding common_peak2_100_654_0.201497097180646_9.45609964501513_1.81490328739671 chr12 17347639 17349218 + 1.81490328739671 NA promoter-TSS (NM_001008421) promoter-TSS (NM_001008421) -65 NM_001008421 217431 Mm.27536 NM_001008421 ENSMUSG00000061458 Nol10 Gm67 nucleolar protein 10 protein-coding common_peak1_186_1756_-0.131980801906352_10.7129080750552_1.81486117758729 chr19 8941859 8943145 + 1.81486117758729 NA TTS (NM_144872) TTS (NM_144872) 582 NM_011842 23942 Mm.25339 NM_011842 ENSMUSG00000071646 Mta2 AW550797|Mata1l1|Mta1l1|mmta2 metastasis-associated gene family, member 2 protein-coding common_peak2_86_724_-0.209039354236443_9.39731750778407_1.81464763653262 chr15 76242483 76243996 + 1.81464763653262 NA 5' UTR (NM_001163576, exon 1 of 10) 5' UTR (NM_001163576, exon 1 of 10) 201 NM_001163576 671535 Mm.373750 NM_001163575 ENSMUSG00000063268 Parp10 - poly (ADP-ribose) polymerase family, member 10 protein-coding common_peak2_86_724_-0.209039354236443_9.39731750778407_1.81464763653262-2 chr4 106839025 106840659 + 1.81464763653262 NA Intergenic CpG -40011 NM_025590 329910 Mm.222956 NM_025590 ENSMUSG00000034853 Acot11 1110020M10Rik|2010309H15Rik|AW060409|BFIT|BFIT1|Thea|Them1|mKIAA0707 acyl-CoA thioesterase 11 protein-coding common_peak1_86_724_-0.209039354236443_9.39731750778407_1.81464763653262 chr8 25625277 25626567 + 1.81464763653262 NA intron (NM_001308482, intron 1 of 7) intron (NM_001308482, intron 1 of 7) -14655 NM_001081269 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Whsc1l1 6720429E03|A530023P05|AI528490|NSD3|WHISTLE Wolf-Hirschhorn syndrome candidate 1-like 1 (human) protein-coding common_peak2_34_155_0.396043495661285_7.48342396669289_1.81388289129873-2 chr6 95117814 95118581 + 1.81388289129873 NA intron (NM_001102670, intron 1 of 2) CpG 317 NM_001008785 243574 Mm.333275 NM_001008785 ENSMUSG00000030031 Kbtbd8 AU040152|SSEC-51|SSEC51|Takrp|mKIAA1842 kelch repeat and BTB (POZ) domain containing 8 protein-coding common_peak1_34_155_0.396043495661285_7.48342396669289_1.81388289129873 chr3 88446161 88446922 + 1.81388289129873 NA intron (NM_001163489, intron 10 of 14) ID_B1|SINE|B4 -5590 NR_105978 102465611 NR_105978 ENSMUSG00000098655 Mir7011 Gm27677|mmu-mir-7011 microRNA 7011 ncRNA common_peak2_34_155_0.396043495661285_7.48342396669289_1.81388289129873 chr1 40790160 40791219 + 1.81388289129873 NA promoter-TSS (NM_172499) promoter-TSS (NM_172499) -32 NM_172499 211798 Mm.235443 NM_172499 ENSMUSG00000041945 Mfsd9 4931419K03Rik major facilitator superfamily domain containing 9 protein-coding common_peak1_296_3030_-0.0999891568168803_11.5155835583759_1.81387273995232 chr4 11155330 11157739 + 1.81387273995232 NA promoter-TSS (NM_001199105) promoter-TSS (NM_001199105) 93 NM_021897 60599 Mm.393018 NM_021897 ENSMUSG00000028211 Trp53inp1 2700057G22Rik|SIP|SIP18|SIP27|Stinp|Teap transformation related protein 53 inducible nuclear protein 1 protein-coding common_peak2_77_465_0.235369616139938_8.98187095272425_1.81379942859006 chr5 92352889 92354330 + 1.81379942859006 NA intron (NM_001310664, intron 2 of 10) intron (NM_001310664, intron 2 of 10) -4720 NM_021274 15945 Mm.877 NM_021274 ENSMUSG00000034855 Cxcl10 C7|CRG-2|INP10|IP-10|IP10|Ifi10|Scyb10|gIP-10|mob-1 chemokine (C-X-C motif) ligand 10 protein-coding common_peak1_174_1625_-0.137560240673173_10.5983314217384_1.81378907895005 chr19 45997365 45998897 + 1.81378907895005 NA intron (NM_198296, intron 1 of 25) CpG 357 NM_198296 71617 Mm.210949 NM_198296 ENSMUSG00000039901 9130011E15Rik AI431055|AW050122 RIKEN cDNA 9130011E15 gene protein-coding common_peak2_209_2013_-0.123655426143609_10.914020254935_1.81375624381343 chr5 34167649 34171038 + 1.81375624381343 NA promoter-TSS (NM_146159) promoter-TSS (NM_146159) 81 NM_146159 231123 Mm.319286 NM_146159 ENSMUSG00000079555 Haus3 D4S43h|D5H4S43|D5H4S43E HAUS augmin-like complex, subunit 3 protein-coding common_peak2_331_3458_-0.0934088068318655_11.709434894957_1.81341467758554 chr8 4676560 4679356 + 1.81341467758554 NA Intergenic CpG 64788 NM_145591 233987 Mm.102799 NM_145591 ENSMUSG00000058748 Zfp958 - zinc finger protein 958 protein-coding common_peak2_59_327_0.277716739165976_8.49641037420107_1.81329989332116 chr7 90067136 90068826 + 1.81329989332116 NA Intergenic Intergenic 38822 NR_110364 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15 RIKEN cDNA E230029C05 gene ncRNA common_peak1_105_697_0.195270850419815_9.54471865141956_1.81236259662209 chr6 124662049 124663809 + 1.81236259662209 NA promoter-TSS (NM_145130) promoter-TSS (NM_145130) -175 NM_145130 14792 Mm.273915 NM_145130 ENSMUSG00000004270 Lpcat3 C3f|Grcc3f|Lpcat|Lpeat|Lplat5|Lpsat|Mboat5|Moact5|Oact5|PTG lysophosphatidylcholine acyltransferase 3 protein-coding common_peak2_54_431_-0.273596483777553_8.61808926027469_1.81226378843954 chr7 122939706 122941099 + 1.81226378843954 NA Intergenic Intergenic 30057 NR_045614 73951 Mm.389936 NR_045614 4930413G21Rik - RIKEN cDNA 4930413G21 gene ncRNA common_peak1_54_431_-0.273596483777553_8.61808926027469_1.81226378843954 chr16 55887655 55888681 + 1.81226378843954 NA intron (NM_001134457, intron 2 of 5) intron (NM_001134457, intron 2 of 5) 7111 NM_001134457 385658 Mm.310635 NM_001134457 ENSMUSG00000075033 Nxpe3 Fam55c|Gm1752|Gm611 neurexophilin and PC-esterase domain family, member 3 protein-coding common_peak2_138_1242_-0.157625800259883_10.2007976809225_1.81185032009964 chr19 8896934 8899249 + 1.81185032009964 NA promoter-TSS (NM_008060) promoter-TSS (NM_008060) 34 NM_008060 14376 Mm.3196 NM_008060 ENSMUSG00000071650 Ganab AU042638|G2an|GluII|mKIAA0088 alpha glucosidase 2 alpha neutral subunit protein-coding common_peak2_33_254_-0.364204864698331_7.81225100450969_1.81148719428602 chr3 137852511 137854285 + 1.81148719428602 NA Intergenic MTEa|LTR|ERVL-MaLR -11089 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak1_33_254_-0.364204864698331_7.81225100450969_1.81148719428602 chr13 55014705 55015467 + 1.81148719428602 NA exon (NM_001206391, exon 3 of 19) exon (NM_001206391, exon 3 of 19) 5733 NM_001206390 212032 Mm.267479 NM_001033245 ENSMUSG00000025877 Hk3 HK III|HK-III hexokinase 3 protein-coding common_peak2_129_1150_-0.165145286612978_10.0860994748257_1.8108925147468 chr7 39517048 39518621 + 1.8108925147468 NA promoter-TSS (NM_001004139) promoter-TSS (NM_001004139) 68 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak1_256_2190_0.112227880166454_11.1534877090734_1.81086830785754 chr3 108017499 108019760 + 1.81086830785754 NA promoter-TSS (NM_010358) promoter-TSS (NM_010358) -656 NM_010358 14862 Mm.37199 NM_010358 ENSMUSG00000058135 Gstm1 Gstb-1|Gstb1 glutathione S-transferase, mu 1 protein-coding common_peak1_54_290_0.296415675477633_8.3330831806471_1.8103401403606-2 chr8 128686875 128687962 + 1.8103401403606 NA intron (NM_010578, intron 1 of 15) intron (NM_010578, intron 1 of 15) 1764 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_54_290_0.296415675477633_8.3330831806471_1.8103401403606 chr5 37036688 37037785 + 1.8103401403606 NA Intergenic Intergenic -13621 NM_178394 76071 Mm.85280 NM_178394 ENSMUSG00000063646 Jakmip1 5830437M04Rik|C330021K24Rik|Gababrbp|Marlin-1 janus kinase and microtubule interacting protein 1 protein-coding common_peak1_238_2343_-0.11365234032967_11.1379306842574_1.8101792885395 chr11 77606738 77608414 + 1.8101792885395 NA 5' UTR (NM_144825, exon 1 of 20) 5' UTR (NM_144825, exon 1 of 20) 239 NM_144825 216965 Mm.340436 NM_144825 ENSMUSG00000017291 Taok1 2810468K05Rik|AU020252|D130018F14Rik|Map3k16|Markk|Psk2|mKIAA1361 TAO kinase 1 protein-coding common_peak2_73_602_-0.229618229502318_9.12120507714893_1.8093948821081 chr9 72465085 72467205 + 1.8093948821081 NA intron (NM_009359, intron 10 of 11) L1MC|LINE|L1 25814 NM_009359 21778 Mm.14485 NM_009359 ENSMUSG00000090626 Tex9 Gm19407|tsec-1 testis expressed gene 9 protein-coding common_peak2_238_1996_0.117485896648606_11.0223615657683_1.80927156839914 chr11 58976665 58979231 + 1.80927156839914 NA promoter-TSS (NM_053168) promoter-TSS (NM_053168) -145 NM_001290988 94091 Mm.248049 NM_053168 ENSMUSG00000020455 Trim11 - tripartite motif-containing 11 protein-coding common_peak1_66_538_-0.243597762602782_8.95234258145111_1.80926172158709 chr6 122291072 122291925 + 1.80926172158709 NA Intergenic B3|SINE|B2 -8665 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak1_216_1764_0.124765845841234_10.8478353910792_1.80881592316112 chr2 60879807 60881865 + 1.80881592316112 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 602 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding unique_peak2_33_149_0.401329881664647_7.4294836313282_1.80857240384417 chr1 180398058 180399274 + 1.80857240384417 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -68117 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_33_149_0.401329881664647_7.4294836313282_1.80857240384417 chr4 156235976 156236522 + 1.80857240384417 NA exon (NM_021303, exon 2 of 19) exon (NM_021303, exon 2 of 19) 239 NM_021303 57741 Mm.423051 NM_021303 ENSMUSG00000095567 Noc2l AA410003|AF155546|NIR NOC2 like nucleolar associated transcriptional repressor protein-coding common_peak1_26_198_-0.414417053704054_7.42941609369162_1.80857240384417 chr3 96502599 96503229 + 1.80857240384417 NA Intergenic Intergenic -22271 NM_027126 69585 Mm.171314 NM_027126 ENSMUSG00000038403 Hfe2 2310035L15Rik|5230400G09Rik|AI414844|AI789733|DL-M|HJV|Rgmc|hemojuvelin hemochromatosis type 2 (juvenile) protein-coding common_peak2_155_1421_-0.147537677638843_10.3999369108_1.80837963242625 chr2 26444189 26446792 + 1.80837963242625 NA promoter-TSS (NM_153125) promoter-TSS (NM_153125) -274 NM_153125 227648 Mm.206371 NM_153125 ENSMUSG00000026924 Sec16a AU024582|C230052J16Rik SEC16 homolog A, endoplasmic reticulum export factor protein-coding common_peak2_49_255_0.312627503322741_8.15631375166137_1.80818928951887 chr7 80208975 80210659 + 1.80818928951887 NA intron (NM_013659, intron 2 of 14) intron (NM_013659, intron 2 of 14) 22976 NM_013659 20352 Mm.275909 NM_013659 ENSMUSG00000030539 Sema4b SemC|Semac|mKIAA1745 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B protein-coding common_peak2_32_246_-0.371047283923798_7.76284358962278_1.80815963649655 chr9 75361869 75362970 + 1.80815963649655 NA Intergenic Intergenic 14661 NM_013479 12049 Mm.25988 NM_013479 ENSMUSG00000032191 Bcl2l10 AA420380|AU023065|Boo|C85687|Diva Bcl2-like 10 protein-coding unique_peak2_32_246_-0.371047283923798_7.76284358962278_1.80815963649655 chr4 86721271 86722574 + 1.80815963649655 NA Intergenic Intergenic -26633 NM_184088 329877 Mm.273718 NM_184088 ENSMUSG00000038024 Dennd4c 1700065A05Rik|AA420392 DENN/MADD domain containing 4C protein-coding common_peak2_199_1589_0.131041075523735_10.7003315879336_1.80815115847737 chr18 80688911 80693423 + 1.80815115847737 NA intron (NM_198429, intron 2 of 9) intron (NM_198429, intron 2 of 9) 17006 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_124_1098_-0.167854891934528_10.018048224982_1.80809353136772 chr2 165954031 165955898 + 1.80809353136772 NA Intergenic Intergenic -37673 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak2_124_1098_-0.167854891934528_10.018048224982_1.80809353136772-2 chr5 143328411 143330191 + 1.80809353136772 NA promoter-TSS (NR_027874) promoter-TSS (NR_027874) -7 NR_027874 67672 Mm.30983 NR_027874 ENSMUSG00000089889 0610040B10Rik - RIKEN cDNA 0610040B10 gene ncRNA common_peak2_117_1028_-0.174888550665788_9.91958299156108_1.80807994437994 chr8 111642757 111644950 + 1.80807994437994 NA intron (NM_011742, intron 1 of 3) CpG 410 NM_011742 22640 Mm.4184 NM_011742 ENSMUSG00000055835 Zfp1 Fnp-1|Zfp-1|mkr-1 zinc finger protein 1 protein-coding common_peak1_43_214_0.338217204290847_7.91730145173488_1.80767042091326-2 chrX 112311324 112312077 + 1.80767042091326 NA intron (NM_001313734, intron 1 of 6) intron (NM_001313734, intron 1 of 6) 348 NM_026565 68117 Mm.161014 NM_026565 ENSMUSG00000025525 Apool 6720473G16Rik|9430083G14Rik|E130106L15Rik apolipoprotein O-like protein-coding common_peak1_43_214_0.338217204290847_7.91730145173488_1.80767042091326 chr3 96813667 96814502 + 1.80767042091326 NA intron (NM_001163496, intron 1 of 4) intron (NM_001163496, intron 1 of 4) 437 NM_018767 54215 Mm.34693 NM_018767 ENSMUSG00000038304 Cd160 AU045688|By55 CD160 antigen protein-coding common_peak2_73_433_0.244844729953288_8.88397359742112_1.80730805793297 chr5 122144855 122146202 + 1.80730805793297 NA Intergenic Intergenic -7466 NM_183307 330188 Mm.386907 NM_183307 ENSMUSG00000043036 Ccdc63 4921511C16Rik coiled-coil domain containing 63 protein-coding common_peak1_62_502_-0.252805429853744_8.84801187487865_1.80696489443006 chr3 31060467 31061520 + 1.80696489443006 NA Intergenic Intergenic 22027 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA common_peak1_107_928_-0.184102597170346_9.76748348779748_1.80688481998611 chr9 71485132 71486068 + 1.80688481998611 NA promoter-TSS (NM_001164793) promoter-TSS (NM_001164793) 383 NM_178602 28015 Mm.21094 NM_178602 ENSMUSG00000032199 Polr2m AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185 polymerase (RNA) II (DNA directed) polypeptide M protein-coding common_peak2_107_928_-0.184102597170346_9.76748348779748_1.80688481998611 chr5 20954119 20956577 + 1.80688481998611 NA non-coding (NR_030699, exon 1 of 1) non-coding (NR_030699, exon 1 of 1) -3526 NM_001080977 242860 Mm.254286 NM_001080977 ENSMUSG00000039968 Rsbn1l 8430412F05Rik|AI447441|C330002G24Rik round spermatid basic protein 1-like protein-coding common_peak2_24_96_0.486102349949256_6.84296401716176_1.80610640516706 chr18 66002001 66002749 + 1.80610640516706 NA exon (NM_001172062, exon 1 of 13) exon (NM_001172062, exon 1 of 13) 260 NM_027400 70361 Mm.290857 NM_027400 ENSMUSG00000041891 Lman1 2610020P13Rik|AI326273|AU043785|C730041J05|ERGIC53|F5F8D|MCFD1|MR60|P58|gp58 lectin, mannose-binding, 1 protein-coding common_peak1_24_96_0.486102349949256_6.84296401716176_1.80610640516706 chr11 49971207 49971872 + 1.80610640516706 NA intron (NM_029004, intron 11 of 13) intron (NM_029004, intron 11 of 13) -53792 NM_021540 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak1_24_96_0.486102349949256_6.84296401716176_1.80610640516706-3 chr4 59284312 59284855 + 1.80610640516706 NA Intergenic Intergenic 24532 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_24_96_0.486102349949256_6.84296401716176_1.80610640516706-2 chr13 92353097 92353658 + 1.80610640516706 NA intron (NM_001311120, intron 1 of 23) intron (NM_001311120, intron 1 of 23) -1406 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding common_peak1_225_1859_0.121044903363364_10.9216093576771_1.80595804933732 chr12 70967678 70969324 + 1.80595804933732 NA Intergenic CpG -6122 NM_001310595 19167 Mm.296338 NM_011184 ENSMUSG00000060073 Psma3 Lmpc8 proteasome (prosome, macropain) subunit, alpha type 3 protein-coding common_peak2_322_2930_0.0969191933017779_11.5656368493404_1.80595187924597 chr6 87809315 87812839 + 1.80595187924597 NA intron (NR_104478, intron 1 of 2) CpG 702 NM_001039394 69834 Mm.37380 NM_133717 ENSMUSG00000030055 Rab43 1810048P08Rik|2500004H21Rik|AW490415 RAB43, member RAS oncogene family protein-coding common_peak1_312_2815_0.0990115773569169_11.5089374073158_1.80586688703618 chr2 19656931 19659327 + 1.80586688703618 NA promoter-TSS (NM_027715) promoter-TSS (NM_027715) 67 NM_027715 71198 Mm.83981 NM_027715 ENSMUSG00000043415 Otud1 4933428L19Rik OTU domain containing 1 protein-coding unique_peak2_13_101_-0.612472903139925_6.36618889040153_1.80558047027014 chrX 20285911 20286736 + 1.80558047027014 NA intron (NM_177353, intron 1 of 16) B2_Mm1a|SINE|B2 5441 NM_177353 236727 Mm.132983 NM_177353 ENSMUSG00000037341 Slc9a7 A530087D17Rik|NHE7 solute carrier family 9 (sodium/hydrogen exchanger), member 7 protein-coding common_peak1_13_101_-0.612472903139925_6.36618889040153_1.80558047027014 chr8 25609366 25609742 + 1.80558047027014 NA intron (NM_001308482, intron 1 of 7) ID_B1|SINE|B4 7270 NM_001308482 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Whsc1l1 6720429E03|A530023P05|AI528490|NSD3|WHISTLE Wolf-Hirschhorn syndrome candidate 1-like 1 (human) protein-coding common_peak1_58_467_-0.26483831454158_8.73794556231261_1.8053518562241-2 chr9 15305782 15306804 + 1.8053518562241 NA promoter-TSS (NM_027261) promoter-TSS (NM_027261) 79 NM_027261 75316 Mm.354115 NM_026541 ENSMUSG00000031939 Taf1d 2810003M17Rik|4930553M18Rik|5930426I11Rik|Josd3|TAF(I)41|TAFI41 TATA-box binding protein associated factor, RNA polymerase I, D protein-coding common_peak1_58_467_-0.26483831454158_8.73794556231261_1.8053518562241 chr6 129916489 129917205 + 1.8053518562241 NA Intergenic Intergenic -3623 NM_008463 16636 Mm.14111 NM_008463 ENSMUSG00000030173 Klra5 Ly49e killer cell lectin-like receptor, subfamily A, member 5 protein-coding unique_peak2_32_143_0.407394946218568_7.3736224745516_1.80415513419088 chr17 25828281 25829532 + 1.80415513419088 NA promoter-TSS (NM_028101) promoter-TSS (NM_028101) -137 NM_028101 72106 Mm.277599 NM_028101 ENSMUSG00000025736 Jmjd8 2610003J06Rik jumonji domain containing 8 protein-coding common_peak2_32_143_0.407394946218568_7.3736224745516_1.80415513419088 chr14 100212563 100213680 + 1.80415513419088 NA Intergenic MTEa|LTR|ERVL-MaLR -63325 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding common_peak1_32_143_0.407394946218568_7.3736224745516_1.80415513419088 chr4 32350869 32351626 + 1.80415513419088 NA Intergenic Intergenic -66188 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak2_26_107_0.467320064676127_6.98854753450153_1.80409597155592 chr9 37235343 37236051 + 1.80409597155592 NA intron (NM_001145960, intron 10 of 18) intron (NM_001145960, intron 10 of 18) 20041 NM_020258 56857 Mm.440037 NM_020258 ENSMUSG00000032122 Slc37a2 G3PP|Slc37a1|cI-2|ci2 solute carrier family 37 (glycerol-3-phosphate transporter), member 2 protein-coding common_peak1_26_107_0.467320064676127_6.98854753450153_1.80409597155592 chr12 86725941 86726581 + 1.80409597155592 NA intron (NM_144524, intron 1 of 9) CpG 199 NM_144524 68737 Mm.63979 NM_144524 ENSMUSG00000021257 Angel1 1110030H02Rik|mKIAA0759 angel homolog 1 protein-coding common_peak1_26_107_0.467320064676127_6.98854753450153_1.80409597155592-2 chr14 70010879 70011238 + 1.80409597155592 NA intron (NM_028560, intron 4 of 6) MIRc|SINE|MIR -66387 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding common_peak1_26_107_0.467320064676127_6.98854753450153_1.80409597155592-3 chr5 32785567 32786173 + 1.80409597155592 NA promoter-TSS (NM_177298) promoter-TSS (NM_177298) -244 NM_177298 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding unique_peak2_79_658_-0.219775805004563_9.25424675250577_1.80402734004112 chr6 47663350 47665164 + 1.80402734004112 NA promoter-TSS (NR_002841).4 promoter-TSS (NR_002841).4 -502 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_79_658_-0.219775805004563_9.25424675250577_1.80402734004112 chr15 82338061 82339628 + 1.80402734004112 NA promoter-TSS (NM_008669) promoter-TSS (NM_008669) -18 NM_008669 17939 Mm.20325 NM_008669 ENSMUSG00000022453 Naga - N-acetyl galactosaminidase, alpha protein-coding unique_peak2_30_230_-0.385066836681751_7.65921562307518_1.8039841063261 chr6 128756942 128758367 + 1.8039841063261 NA Intergenic BGLII_B|LTR|ERVK 30987 NM_008527 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak1_30_230_-0.385066836681751_7.65921562307518_1.8039841063261 chr4 129365260 129365799 + 1.8039841063261 NA intron (NM_028603, intron 2 of 4) intron (NM_028603, intron 2 of 4) 12499 NM_028603 73680 Mm.32997 NM_028603 ENSMUSG00000028807 Zbtb8a 2410081M15Rik|AI480941 zinc finger and BTB domain containing 8a protein-coding common_peak2_119_1048_-0.172917907606852_9.94834000877384_1.80394188865222 chr9 108566292 108568597 + 1.80394188865222 NA promoter-TSS (NM_023247) promoter-TSS (NM_023247) -102 NM_023247 66706 Mm.29471 NM_023247 ENSMUSG00000070283 Ndufaf3 4733401H18Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3 protein-coding common_peak1_126_1119_-0.167072322770922_10.0457468555595_1.803621419237 chr11 98463543 98464692 + 1.803621419237 NA TTS (NM_011771) TTS (NM_011771) 17283 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding unique_peak2_17_130_-0.528737639664783_6.76905418170506_1.80336905410264-2 chr17 30097287 30098130 + 1.80336905410264 NA intron (NM_148926, intron 2 of 4) intron (NM_148926, intron 2 of 4) 92621 NM_148926 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding unique_peak2_17_130_-0.528737639664783_6.76905418170506_1.80336905410264-5 chr9 108808313 108808898 + 1.80336905410264 NA exon (NM_030729, exon 1 of 13) exon (NM_030729, exon 1 of 13) 225 NM_030729 80987 Mm.192416 NM_030729 ENSMUSG00000032598 Nckipsd AF3P21|DIP1|ORF1|SPIN90|WASLBP|WISH|Wasbp NCK interacting protein with SH3 domain protein-coding common_peak1_17_130_-0.528737639664783_6.76905418170506_1.80336905410264 chr16 58669957 58670367 + 1.80336905410264 NA promoter-TSS (NM_007757) promoter-TSS (NM_007757) -46 NM_007757 12892 Mm.291519 NM_007757 ENSMUSG00000022742 Cpox CPX|Cpo|HCP|cac|nct coproporphyrinogen oxidase protein-coding unique_peak2_17_130_-0.528737639664783_6.76905418170506_1.80336905410264-4 chr9 106437726 106438648 + 1.80336905410264 NA promoter-TSS (NM_025371) promoter-TSS (NM_025371) 49 NM_025371 109652 Mm.7165 NM_025371 ENSMUSG00000023262 Acy1 1110014J22Rik|Acy-1 aminoacylase 1 protein-coding unique_peak2_17_130_-0.528737639664783_6.76905418170506_1.80336905410264 chr11 70229083 70230119 + 1.80336905410264 NA intron (NM_007528, intron 1 of 8) intron (NM_007528, intron 1 of 8) 197 NM_007528 12029 Mm.12930 NM_007528 ENSMUSG00000000317 Bcl6b Bazf B cell CLL/lymphoma 6, member B protein-coding unique_peak2_17_130_-0.528737639664783_6.76905418170506_1.80336905410264-3 chr9 61377206 61378030 + 1.80336905410264 NA intron (NM_009389, intron 4 of 19) intron (NM_009389, intron 4 of 19) 5252 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak1_29_222_-0.392243467322602_7.604778166259_1.80332698627382 chr17 71195866 71196416 + 1.80332698627382 NA intron (NM_022882, intron 1 of 19) MER20|DNA|hAT-Charlie -8513 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak2_76_457_0.237517752676123_8.957962664435_1.80319657225726 chr10 116928452 116930995 + 1.80319657225726 NA intron (NM_001003950, intron 3 of 9) L1MA6|LINE|L1 20657 NM_001003950 216363 Mm.336394 NM_001003950 ENSMUSG00000064181 Rab3ip B230311A06|Gtpat12|Rabin3 RAB3A interacting protein protein-coding common_peak1_42_207_0.345287452112859_7.87308344419752_1.80260889890634 chr8 90828687 90829505 + 1.80260889890634 NA intron (NM_177224, intron 1 of 39) intron (NM_177224, intron 1 of 39) 261 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_104_898_-0.186597074837628_9.71887876809563_1.80253253824601 chr13 23368494 23369946 + 1.80253253824601 NA promoter-TSS (NM_001111107) promoter-TSS (NM_001111107) -12 NM_001286155 218100 Mm.286454 NM_172586 ENSMUSG00000046351 Zfp322a Znf322|Znf322a zinc finger protein 322A protein-coding common_peak1_88_554_0.216674407526719_9.22468116500083_1.80221986055564 chr1 118310535 118311644 + 1.80221986055564 NA promoter-TSS (NM_011650) promoter-TSS (NM_011650) 43 NM_011650 22099 Mm.426637 NM_011650 ENSMUSG00000026374 Tsn 2610034C24Rik|AU040286|C3PO|TB-RBP translin protein-coding common_peak1_173_1329_0.142199611463656_10.4483103361204_1.80164869106499 chr9 108346684 108348767 + 1.80164869106499 NA promoter-TSS (NM_011678) promoter-TSS (NM_011678) -106 NM_001311157 22258 Mm.3974 NM_011678 ENSMUSG00000032612 Usp4 F730026I20Rik|Unp|mKIAA4155 ubiquitin specific peptidase 4 (proto-oncogene) protein-coding common_peak1_150_1367_-0.149332129900346_10.3431864499357_1.80134685463795 chr2 102900197 102902110 + 1.80134685463795 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 512 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_135_966_0.1660011150564_10.000372637005_1.80115173457183 chr3 90514186 90515670 + 1.80115173457183 NA promoter-TSS (NM_011309) promoter-TSS (NM_011309) 493 NM_009113 20196 Mm.6523 NM_009113 ENSMUSG00000042312 S100a13 - S100 calcium binding protein A13 protein-coding common_peak1_69_402_0.253421997181922_8.78134702711893_1.80086136526937 chr8 9977171 9978440 + 1.80086136526937 NA promoter-TSS (NM_026868) promoter-TSS (NM_026868) 88 NM_026868 68904 Mm.142570 NM_026868 ENSMUSG00000040396 Abhd13 1110065L07Rik|AI463703|AI788994 abhydrolase domain containing 13 protein-coding common_peak1_31_137_0.414341117533355_7.31569501554485_1.80074033602045 chr10 39506217 39506923 + 1.80074033602045 NA intron (NM_008054, intron 3 of 13) MLT1E3|LTR|ERVL-MaLR -106364 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak1_31_137_0.414341117533355_7.31569501554485_1.80074033602045-3 chr5 65199182 65199552 + 1.80074033602045 NA promoter-TSS (NM_153391) promoter-TSS (NM_153391) -329 NM_153391 213081 Mm.127550 NM_153391 ENSMUSG00000037890 Wdr19 C330027H04Rik|D330023L08Rik|DYF2|Ift144|PWDMP|mKIAA1638 WD repeat domain 19 protein-coding common_peak1_31_137_0.414341117533355_7.31569501554485_1.80074033602045-2 chr15 77804179 77804820 + 1.80074033602045 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 37676 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_53_283_0.29907275852127_8.29928349876532_1.80042904296051 chr17 34047552 34048545 + 1.80042904296051 NA intron (NM_009926, intron 6 of 63) intron (NM_009926, intron 6 of 63) 8611 NM_009926 12815 Mm.20230 NM_009926 ENSMUSG00000024330 Col11a2 - collagen, type XI, alpha 2 protein-coding common_peak2_27_113_0.453674735853184_7.05972738209133_1.80003696554967 chr4 101223077 101224162 + 1.80003696554967 NA intron (NM_146145, intron 1 of 24) URR1A|DNA|hAT-Charlie 41663 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_492_5539_-0.0732747038295525_12.3990329090218_1.79899288743662 chr6 122292026 122296290 + 1.79899288743662 NA Intergenic RMER10A|LTR|ERVL -11325 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak2_101_868_-0.188929278500588_9.66874772756411_1.79893736347262 chr10 78008893 78010550 + 1.79893736347262 NA promoter-TSS (NM_008826) promoter-TSS (NM_008826) 75 NM_008826 18641 Mm.269649 NM_008826 ENSMUSG00000020277 Pfkl AA407869|ATP-PFK|PFK-L phosphofructokinase, liver, B-type protein-coding common_peak2_213_2057_-0.12144453635184_10.946304998718_1.79851163160462 chr16 94525468 94527866 + 1.79851163160462 NA promoter-TSS (NM_007834) promoter-TSS (NM_007834) -38 NM_007834 13185 Mm.7472 NM_007834 ENSMUSG00000022898 Dscr3 AW538125|Dcra Down syndrome critical region gene 3 protein-coding common_peak2_72_593_-0.232000094415138_9.0983190735932_1.79812594290922 chr7 101933140 101934673 + 1.79812594290922 NA promoter-TSS (NM_001162973) promoter-TSS (NM_001162973) -49 NM_001162973 69358 Mm.214841 NM_027053 ENSMUSG00000064307 Lrrc51 1700008D07Rik|Lrtomt leucine rich repeat containing 51 protein-coding common_peak1_137_985_0.163763795055239_10.0273257339055_1.79798721477692 chrX 169990766 169992029 + 1.79798721477692 NA TTS (NM_001290506) TTS (NM_001290506) -12480 NR_029457 654820 Mm.34441 NM_001039559 ENSMUSG00000072844 G530011O06Rik - RIKEN cDNA G530011O06 gene ncRNA unique_peak2_25_102_0.468920717457713_6.92096088591208_1.79795914124824-2 chr17 84892201 84893190 + 1.79795914124824 NA Intergenic Intergenic -64046 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding unique_peak2_25_102_0.468920717457713_6.92096088591208_1.79795914124824 chr14 14087927 14089017 + 1.79795914124824 NA intron (NM_139227, intron 5 of 11) intron (NM_139227, intron 5 of 11) 32432 NM_025550 66413 Mm.27591 NM_025550 ENSMUSG00000021737 Psmd6 2400006A19Rik proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 protein-coding common_peak1_25_102_0.468920717457713_6.92096088591208_1.79795914124824 chr17 5006564 5007166 + 1.79795914124824 NA intron (NM_001085355, intron 1 of 19) intron (NM_001085355, intron 1 of 19) 11791 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_28_119_0.441772718904049_7.12777695506054_1.79790815040315-2 chr11 5505746 5506280 + 1.79790815040315 NA Intergenic Intergenic -14628 NM_013842 22433 Mm.469937 NM_013842 ENSMUSG00000020484 Xbp1 D11Ertd39e|TREB-5|TREB5|XBP-1 X-box binding protein 1 protein-coding common_peak1_28_119_0.441772718904049_7.12777695506054_1.79790815040315 chr1 181862177 181862791 + 1.79790815040315 NA Intergenic Intergenic -20083 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak2_47_370_-0.294887597342351_8.38783157794963_1.79777026753637 chr9 20384440 20386007 + 1.79777026753637 NA promoter-TSS (NM_001004190) promoter-TSS (NM_001004190) -65 NM_001004190 434377 Mm.379669 NM_001004190 ENSMUSG00000045519 Zfp560 2310030G09Rik|Znf560 zinc finger protein 560 protein-coding common_peak1_41_320_-0.322342532137448_8.16525822105358_1.79769906143646 chr19 57099266 57100118 + 1.79769906143646 NA intron (NM_001290813, intron 6 of 20) B3|SINE|B2 19332 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding unique_peak2_41_320_-0.322342532137448_8.16525822105358_1.79769906143646 chrX 101735994 101738124 + 1.79769906143646 NA Intergenic Intergenic -2912 NM_009910 12766 Mm.12876 NM_009910 ENSMUSG00000050232 Cxcr3 Cd183|Cmkar3 chemokine (C-X-C motif) receptor 3 protein-coding common_peak2_244_2061_0.115153206420896_11.0674052205786_1.79749086188983 chr14 118937013 118939720 + 1.79749086188983 NA intron (NM_008929, intron 1 of 11) CpG 434 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding common_peak2_211_2034_-0.121846691337785_10.9298897334847_1.79747240137073 chr19 41363791 41368363 + 1.79747240137073 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 18993 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_226_1870_0.120350903746948_10.9297692951143_1.79747240137073 chr11 51583735 51585438 + 1.79747240137073 NA promoter-TSS (NM_028398) promoter-TSS (NM_028398) -171 NM_028398 72947 Mm.256875 NM_028398 ENSMUSG00000020359 Phykpl 2900006B13Rik|Agxt2l2 5-phosphohydroxy-L-lysine phospholyase protein-coding common_peak1_29_125_0.431376509097786_7.19296817804881_1.79745226329401 chr16 94289723 94290328 + 1.79745226329401 NA Intergenic CpG -2169 NM_139145 110948 Mm.30921 NM_139145 ENSMUSG00000040820 Hlcs 410I21.SP6|D16Jhu34 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) protein-coding common_peak1_111_967_-0.179073864883957_9.82932630483262_1.7969756817113 chr11 98508760 98510845 + 1.7969756817113 NA intron (NM_011771, intron 3 of 7) intron (NM_011771, intron 3 of 7) 36229 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding common_peak2_75_620_-0.224860632450879_9.16601914199504_1.79689569019341 chr11 70844312 70845757 + 1.79689569019341 NA intron (NM_001291141, intron 1 of 16) CpG 273 NM_001291142 54189 Mm.7087 NM_019400 ENSMUSG00000020817 Rabep1 Rab5ep|rabaptin-5|rabaptin-5alpha rabaptin, RAB GTPase binding effector protein 1 protein-coding common_peak1_75_620_-0.224860632450879_9.16601914199504_1.79689569019341 chr11 115408241 115409593 + 1.79689569019341 NA intron (NM_026729, intron 2 of 5) intron (NM_026729, intron 2 of 5) 5151 NM_026729 68572 Mm.271062 NM_026729 ENSMUSG00000018858 Mrpl58 1110001A02Rik|1110002E03Rik|Ict1|MRP-L58 mitochondrial ribosomal protein L58 protein-coding unique_peak1_13_40_0.702400434213486_5.70875222172483_1.79658675346641-2 chr5 122430488 122430871 + 1.79658675346641 NA intron (NM_019805, intron 3 of 10) B3A|SINE|B2 8235 NM_019805 56317 Mm.37341 NM_019805 ENSMUSG00000029466 Anapc7 APC7|AW545589 anaphase promoting complex subunit 7 protein-coding common_peak1_13_40_0.702400434213486_5.70875222172483_1.79658675346641 chr4 121209171 121209526 + 1.79658675346641 NA Intergenic B4A|SINE|B4 -20814 NM_001081013 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding unique_peak1_13_40_0.702400434213486_5.70875222172483_1.79658675346641 chr11 115190117 115190456 + 1.79658675346641 NA intron (NM_001033393, intron 2 of 9) Lx8b|LINE|L1 2799 NM_001033393 320534 Mm.260587 NM_001033393 ENSMUSG00000045980 Tmem104 C630005D06Rik|mFLJ00021 transmembrane protein 104 protein-coding common_peak1_406_3926_0.0839531816728663_11.9811884735028_1.79657271578429 chr6 145119971 145124102 + 1.79657271578429 NA 5' UTR (NM_008511, exon 1 of 19) 5' UTR (NM_008511, exon 1 of 19) 297 NM_008511 16970 Mm.843 NM_008511 ENSMUSG00000030263 Lrmp D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1 lymphoid-restricted membrane protein protein-coding common_peak1_190_1800_-0.130210959919483_10.7494769859465_1.79597471801738 chr9 89210462 89212017 + 1.79597471801738 NA promoter-TSS (NM_026829) promoter-TSS (NM_026829) 49 NM_026829 107885 Mm.486274 NM_026829 ENSMUSG00000066442 Mthfs 1110034I12Rik|2310020H23Rik|AI119695 5, 10-methenyltetrahydrofolate synthetase protein-coding common_peak1_101_663_0.199243656966887_9.47466125983037_1.79574961902336 chr6 29347411 29348783 + 1.79574961902336 NA promoter-TSS (NM_007594) promoter-TSS (NM_007594) -9 NM_007594 12321 Mm.392075 NM_007594 ENSMUSG00000029767 Calu 9530075H20Rik calumenin protein-coding common_peak2_57_312_0.285256778766307_8.43264723631577_1.79533447098612 chr4 8720218 8722019 + 1.79533447098612 NA intron (NM_001277149, intron 1 of 37) intron (NM_001277149, intron 1 of 37) 30712 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_57_312_0.285256778766307_8.43264723631577_1.79533447098612 chr7 125603404 125604240 + 1.79533447098612 NA 5' UTR (NM_021887, exon 1 of 9) 5' UTR (NM_021887, exon 1 of 9) 393 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak1_17_59_0.597794766264149_6.20578797874059_1.79487587501503-2 chr6 53068257 53068654 + 1.79487587501503 NA exon (NM_173406, exon 1 of 5) exon (NM_173406, exon 1 of 5) 169 NM_173406 231986 Mm.386865 NM_173406 ENSMUSG00000063568 Jazf1 AI591476|C820002C15|Jaz1|Tip27 JAZF zinc finger 1 protein-coding common_peak1_17_59_0.597794766264149_6.20578797874059_1.79487587501503 chr10 39431435 39431927 + 1.79487587501503 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 61882 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak1_17_59_0.597794766264149_6.20578797874059_1.79487587501503 chr10 127041473 127041878 + 1.79487587501503 NA promoter-TSS (NM_001205036) promoter-TSS (NM_001205036) -257 NM_010792 17299 Mm.251593 NM_010792 ENSMUSG00000006732 Mettl1 2810012D02Rik methyltransferase like 1 protein-coding unique_peak1_17_59_0.597794766264149_6.20578797874059_1.79487587501503-2 chr19 46869123 46869610 + 1.79487587501503 NA intron (NM_001102471, intron 5 of 6) intron (NM_001102471, intron 5 of 6) 92985 NM_029810 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak1_17_59_0.597794766264149_6.20578797874059_1.79487587501503-3 chr9 69289654 69290065 + 1.79487587501503 NA promoter-TSS (NM_001289916) promoter-TSS (NM_001289916) 18 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding common_peak2_40_311_-0.323958953796823_8.12342274196384_1.79465085820618 chr17 46704396 46705764 + 1.79465085820618 NA promoter-TSS (NM_009358) promoter-TSS (NM_009358) -78 NM_009358 21770 Mm.295009 NM_009358 ENSMUSG00000059409 Ppp2r5d B'delta|TEG-271|Tex271 protein phosphatase 2, regulatory subunit B', delta protein-coding common_peak2_432_4743_-0.079139856864316_12.1723183661138_1.79457890090707 chr7 28778533 28784268 + 1.79457890090707 NA non-coding (NR_040339, exon 1 of 4) non-coding (NR_040339, exon 1 of 4) 114 NR_040339 100503790 Mm.446894 NR_040339 Gm19897 - predicted gene, 19897 ncRNA common_peak2_65_372_0.260900438592_8.67348203955124_1.79451737872319 chr11 83963774 83965150 + 1.79451737872319 NA promoter-TSS (NM_194341) promoter-TSS (NM_194341) 31 NM_194341 217030 Mm.82680 NM_194341 ENSMUSG00000034940 Synrg Ap1gbp1|SYNG synergin, gamma protein-coding common_peak1_93_596_0.20815627734757_9.32566525993859_1.7943622290014 chr11 96313738 96315402 + 1.7943622290014 NA Intergenic CpG -2595 NR_029784 723893 NR_029784 ENSMUSG00000065519 Mir10a Mirn10a|miR-10a|mmu-mir-10a microRNA 10a ncRNA common_peak1_446_4420_0.0789024993068406_12.1496082686075_1.79425486030032 chr6 108660588 108664530 + 1.79425486030032 NA exon (NM_011498, exon 4 of 5) exon (NM_011498, exon 4 of 5) -1625 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA unique_peak2_11_86_-0.655780338942988_6.11505332637723_1.79317922900698 chr10 98779587 98780546 + 1.79317922900698 NA Intergenic Intergenic -135086 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding unique_peak2_11_86_-0.655780338942988_6.11505332637723_1.79317922900698-2 chr12 69825126 69825921 + 1.79317922900698 NA intron (NR_033573, intron 4 of 7) B1F|SINE|Alu -18163 NR_038173 70934 Mm.440427 NR_038172 4931403G20Rik - RIKEN cDNA 4931403G20 gene ncRNA unique_peak2_11_86_-0.655780338942988_6.11505332637723_1.79317922900698-3 chr15 77810333 77811245 + 1.79317922900698 NA intron (NM_022410, intron 2 of 40) intron (NM_022410, intron 2 of 40) 31386 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_68_556_-0.238938197093237_9.00206441879341_1.79315114343374 chrX 101253589 101255404 + 1.79315114343374 NA promoter-TSS (NM_018789) promoter-TSS (NM_018789) -32 NM_018789 54601 Mm.240299 NM_018789 ENSMUSG00000042903 Foxo4 Afxh|Mllt7|afx forkhead box O4 protein-coding common_peak1_18_137_-0.508160253381279_6.85444433008753_1.79311427131558-2 chr2 103681178 103681638 + 1.79311427131558 NA intron (NM_178890, intron 2 of 16) intron (NM_178890, intron 2 of 16) 79842 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding unique_peak2_18_137_-0.508160253381279_6.85444433008753_1.79311427131558-2 chr4 132801851 132802700 + 1.79311427131558 NA Intergenic Intergenic -5911 NM_001033308 230787 Mm.290912 NM_001033308 ENSMUSG00000037731 Themis2 ICB-1 thymocyte selection associated family member 2 protein-coding common_peak1_18_137_-0.508160253381279_6.85444433008753_1.79311427131558-3 chr7 48789081 48789406 + 1.79311427131558 NA intron (NM_028031, intron 1 of 16) CpG 240 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding common_peak2_18_137_-0.508160253381279_6.85444433008753_1.79311427131558 chr7 24546300 24546981 + 1.79311427131558 NA promoter-TSS (NM_009532) promoter-TSS (NM_009532) -510 NM_009532 22594 Mm.4347 NM_009532 ENSMUSG00000051768 Xrcc1 Xrcc-1 X-ray repair complementing defective repair in Chinese hamster cells 1 protein-coding unique_peak2_18_137_-0.508160253381279_6.85444433008753_1.79311427131558 chr1 21079357 21080000 + 1.79311427131558 NA promoter-TSS (NM_177409) promoter-TSS (NM_177409) -453 NM_177409 170829 Mm.185680 NM_177409 ENSMUSG00000041779 Tram2 C330003D03Rik translocating chain-associating membrane protein 2 protein-coding common_peak1_18_137_-0.508160253381279_6.85444433008753_1.79311427131558 chr14 61684105 61684554 + 1.79311427131558 NA Intergenic Intergenic -1956 NR_028264 668253 Mm.32886 NR_028264 ENSMUSG00000097589 Dleu2 1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2 deleted in lymphocytic leukemia, 2 ncRNA common_peak2_145_1315_-0.153012436163255_10.2854375556536_1.79289569194189 chr8 71271962 71274014 + 1.79289569194189 NA promoter-TSS (NM_001163042) promoter-TSS (NM_001163042) 274 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding common_peak1_147_1335_-0.150696018889928_10.3083562830291_1.79247251942952 chr4 150280872 150282273 + 1.79247251942952 NA promoter-TSS (NM_001085492) promoter-TSS (NM_001085492) -344 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak1_47_241_0.321524542003857_8.07962550827652_1.79221420806469 chr16 32162921 32163784 + 1.79221420806469 NA 5' UTR (NM_146069, exon 2 of 4) 5' UTR (NM_146069, exon 2 of 4) 2124 NM_146069 224109 Mm.33498 NM_146069 ENSMUSG00000052384 Nrros E430025L02Rik|Lrcc33|Lrrc33 negative regulator of reactive oxygen species protein-coding common_peak1_103_888_-0.187393741816125_9.70234273792171_1.79163791075557 chr2 77945581 77946449 + 1.79163791075557 NA intron (NM_030560, intron 1 of 20) CpG 341 NM_001290740 80744 Mm.288151 NM_030560 ENSMUSG00000027014 Cwc22 AA684037|AI173004|AL022752|B230213M24|mKIAA1604 CWC22 spliceosome-associated protein protein-coding common_peak1_41_201_0.34587547223306_7.83114921886832_1.79159932165612 chr19 10841780 10842624 + 1.79159932165612 NA promoter-TSS (NM_023044) promoter-TSS (NM_023044) -342 NM_023044 65221 Mm.27387 NM_023044 ENSMUSG00000024737 Slc15a3 Ci1|cI-1 solute carrier family 15, member 3 protein-coding common_peak2_268_2323_0.107964768164479_11.2363767374868_1.79118942508261 chr9 72530301 72533384 + 1.79118942508261 NA promoter-TSS (NR_045735) promoter-TSS (NR_045735) 16 NR_045735 75115 Mm.280755 NR_045735 ENSMUSG00000096986 4930509E16Rik - RIKEN cDNA 4930509E16 gene ncRNA common_peak2_174_1339_0.141534016056719_10.4587842933735_1.79098598017197 chr2 78867757 78871026 + 1.79098598017197 NA 5' UTR (NM_009454, exon 1 of 6) 5' UTR (NM_009454, exon 1 of 6) 344 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_52_276_0.301999599393923_8.26474196574615_1.79074099827195 chr7 30072350 30073185 + 1.79074099827195 NA promoter-TSS (NM_001253385) promoter-TSS (NM_001253385) 56 NM_177889 330502 Mm.295906 NM_177889 ENSMUSG00000098022 Zfp82 A030010D05|Krab16|Mszf3|Zfp-82 zinc finger protein 82 protein-coding common_peak2_87_546_0.217625342274106_9.20420969392961_1.79053606319803 chr2 166692692 166695599 + 1.79053606319803 NA intron (NR_105783, intron 2 of 2) B1_Mus1|SINE|Alu 19687 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding common_peak1_136_1221_-0.158691013283871_10.1756830631768_1.79029261971333 chr10 84917231 84918191 + 1.79029261971333 NA promoter-TSS (NM_001013441) promoter-TSS (NM_001013441) 98 NM_183172 237422 Mm.18936 NM_183172 ENSMUSG00000035620 Ric8b BC051080|Ric-8|Ric-8b RIC8 guanine nucleotide exchange factor B protein-coding common_peak1_134_957_0.166431307981735_9.98709749972705_1.7898389684648 chr6 83165136 83166439 + 1.7898389684648 NA promoter-TSS (NM_001198866) promoter-TSS (NM_001198866) -137 NM_001198866 13191 Mm.6919 NM_007835 ENSMUSG00000031865 Dctn1 AL022633|DAP-150|DP-150|Glued|p150|p150-glued|p150 dynactin 1 protein-coding common_peak2_134_957_0.166431307981735_9.98709749972705_1.7898389684648 chr10 52381216 52383039 + 1.7898389684648 NA promoter-TSS (NM_053187) promoter-TSS (NM_053187) -3 NM_001199272 94221 Mm.390258 NM_053187 ENSMUSG00000019861 Gopc 2210402P09Rik|AI844555|CAL|FIG|GOPC1|PIST golgi associated PDZ and coiled-coil motif containing protein-coding common_peak1_456_4545_0.077830197338697_12.1892970674872_1.78889009712517 chr12 86882469 86885355 + 1.78889009712517 NA 5' UTR (NM_145836, exon 1 of 1) 5' UTR (NM_145836, exon 1 of 1) 902 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_113_768_0.184271242774704_9.67897540934918_1.78797511221219 chr14 30548452 30550175 + 1.78797511221219 NA exon (NM_009388, exon 1 of 14) exon (NM_009388, exon 1 of 14) 182 NM_009388 21881 Mm.290692 NM_009388 ENSMUSG00000021957 Tkt p68 transketolase protein-coding common_peak1_40_194_0.354112951315815_7.78438678940752_1.78764039129009 chr12 111814146 111814761 + 1.78764039129009 NA promoter-TSS (NM_028875) promoter-TSS (NM_028875) 283 NM_026752 68520 Mm.390497 NM_026752 ENSMUSG00000021286 Zfyve21 1110013H04Rik|AW558780|C85416 zinc finger, FYVE domain containing 21 protein-coding common_peak2_40_194_0.354112951315815_7.78438678940752_1.78764039129009 chr19 34526656 34527607 + 1.78764039129009 NA intron (NM_021460, intron 1 of 9) intron (NM_021460, intron 1 of 9) 343 NM_001111100 16889 Mm.157545 NM_021460 ENSMUSG00000024781 Lipa AA960673|Lal|Lip-1|Lip1 lysosomal acid lipase A protein-coding common_peak1_40_194_0.354112951315815_7.78438678940752_1.78764039129009-2 chr14 122223473 122223965 + 1.78764039129009 NA intron (NM_029556, intron 1 of 7) intron (NM_029556, intron 1 of 7) 9919 NR_015532 68245 Mm.443285 NR_015532 ENSMUSG00000100585 1700108J01Rik - RIKEN cDNA 1700108J01 gene ncRNA common_peak1_40_194_0.354112951315815_7.78438678940752_1.78764039129009-3 chr9 70237547 70238348 + 1.78764039129009 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 30597 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak2_39_303_-0.330180974626453_8.08283702613036_1.78671889522647-2 chr4 149099194 149099922 + 1.78671889522647 NA intron (NM_019781, intron 1 of 8) CpG 254 NM_019781 56273 Mm.184172 NM_019781 ENSMUSG00000028975 Pex14 Pex14p|R75137 peroxisomal biogenesis factor 14 protein-coding common_peak2_39_303_-0.330180974626453_8.08283702613036_1.78671889522647 chr2 59053076 59054913 + 1.78671889522647 NA Intergenic Intergenic -35388 NM_001001178 227933 Mm.330234 NM_177650 ENSMUSG00000036641 Ccdc148 5830402J09 coiled-coil domain containing 148 protein-coding common_peak2_370_3493_0.0886139817918217_11.8149708838127_1.78598798777136 chr17 29031019 29035511 + 1.78598798777136 NA intron (NR_036613, intron 1 of 6) intron (NR_036613, intron 1 of 6) 605 NR_036613 20383 Mm.6787 NM_013663 ENSMUSG00000071172 Srsf3 AL024116|Sfrs3|X16 serine/arginine-rich splicing factor 3 protein-coding common_peak1_89_752_-0.20371510592094_9.45464850171146_1.78550654677714 chr8 25016238 25017089 + 1.78550654677714 NA promoter-TSS (NM_027194) promoter-TSS (NM_027194) 259 NM_001270996 11502 Mm.28908 NM_007404 ENSMUSG00000031555 Adam9 AU020942|MDC9|Mltng|mKIAA0021 a disintegrin and metallopeptidase domain 9 (meltrin gamma) protein-coding common_peak1_138_994_0.16343206536159_10.0402687481118_1.78519095208137 chr17 6654105 6655984 + 1.78519095208137 NA intron (NM_001166630, intron 1 of 4).2 intron (NM_001166630, intron 1 of 4).2 787 NM_001166630 100040563 Mm.457381 NM_001166630 ENSMUSG00000000579 Dynlt1c 100040603|Dynlt1d dynein light chain Tctex-type 1C protein-coding common_peak2_165_1526_-0.140366166442147_10.5063012635758_1.78464180316465 chr19 5570228 5573664 + 1.78464180316465 NA TTS (NM_001033448) TTS (NM_001033448) 3872 NM_001033448 381201 Mm.441906 NM_001033448 ENSMUSG00000049562 Ap5b1 Gm962 adaptor-related protein complex 5, beta 1 subunit protein-coding common_peak2_51_405_-0.283302361357888_8.52368473650623_1.78456113457327 chr11 121038454 121040186 + 1.78456113457327 NA exon (NM_009854, exon 1 of 4) exon (NM_009854, exon 1 of 4) 158 NM_009854 12516 Mm.4100 NM_009854 ENSMUSG00000025163 Cd7 - CD7 antigen protein-coding common_peak2_56_305_0.287110876857522_8.40094328112141_1.78447987938472 chr2 125672773 125674002 + 1.78447987938472 NA exon (NM_025613, exon 1 of 1) exon (NM_025613, exon 1 of 1) 287 NM_025613 58521 Mm.425101 NM_025613 ENSMUSG00000091337 Eid1 2610002K20Rik|Cri1|EID-1|ORF12|PNAS-22|PTD014 EP300 interacting inhibitor of differentiation 1 protein-coding unique_peak2_9_72_-0.725302642435598_5.82717323766222_1.78324025080683 chr4 11161606 11162305 + 1.78324025080683 NA intron (NM_021897, intron 1 of 3) intron (NM_021897, intron 1 of 3) 5514 NM_021897 60599 Mm.393018 NM_021897 ENSMUSG00000028211 Trp53inp1 2700057G22Rik|SIP|SIP18|SIP27|Stinp|Teap transformation related protein 53 inducible nuclear protein 1 protein-coding common_peak2_77_639_-0.222372334093144_9.21074192784079_1.78299882432423 chr3 108553925 108554907 + 1.78299882432423 NA promoter-TSS (NR_028538) promoter-TSS (NR_028538) -14 NR_028538 100217438 NR_028538 Scarna2 MBII-382 small Cajal body-specific RNA 2 ncRNA common_peak2_129_912_0.169055781535031_9.91899894075174_1.78295791443338 chr1 134559845 134561485 + 1.78295791443338 NA intron (NM_152895, intron 1 of 26) CpG 487 NM_152895 75605 Mm.28995 NM_152895 ENSMUSG00000042207 Kdm5b 2010009J12Rik|2210016I17Rik|AW556288|D1Ertd202e|Jarid1b|PLU-1|PUT1|Plu1|RBBP2H1A|Rb-Bp2|mKIAA4034 lysine (K)-specific demethylase 5B protein-coding common_peak1_129_912_0.169055781535031_9.91899894075174_1.78295791443338 chr15 82046781 82048147 + 1.78295791443338 NA intron (NM_011482, intron 1 of 2) CpG 134 NM_011482 20826 Mm.299312 NM_011482 ENSMUSG00000063480 Nhp2l1 FA-1|Fta1|Snu13|Ssfa1 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) protein-coding common_peak1_83_695_-0.212244229677518_9.33682138100997_1.78281925115064 chr12 110758729 110760240 + 1.78281925115064 NA intron (NM_027149, intron 1 of 2) MER21B|LTR|ERVL 21535 NM_027149 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding common_peak2_144_1304_-0.153065190066357_10.2733014964241_1.78265775024805 chr13 103773369 103775066 + 1.78265775024805 NA Intergenic CpG -9635 NM_172592 218543 Mm.458176 NM_172592 ENSMUSG00000032621 Srek1 8430401B01|AI450757|AI462342|SRrp508|SRrp86|Sfrs12|Srsf12 splicing regulatory glutamine/lysine-rich protein 1 protein-coding common_peak2_67_547_-0.241271199613644_8.9773964831537_1.78234779129805 chr11 11528243 11529918 + 1.78234779129805 NA Intergenic Intergenic 39814 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak1_67_547_-0.241271199613644_8.9773964831537_1.78234779129805 chrX 137037588 137038581 + 1.78234779129805 NA intron (NM_001082412, intron 1 of 6) CpG 218 NM_001082412 67062 Mm.276518 NM_001082412 ENSMUSG00000044348 Slc25a53 2310046F18Rik|2810402A17Rik|AI448995|AI841128|Mcart6 solute carrier family 25, member 53 protein-coding common_peak2_112_976_-0.176695253795984_9.84386712507039_1.7823232242971 chr16 52127768 52130816 + 1.7823232242971 NA intron (NM_001033238, intron 4 of 17) intron (NM_001033238, intron 4 of 17) 97743 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak2_55_439_-0.268182652320379_8.64726838736447_1.78210322865453 chr5 107437368 107438599 + 1.78210322865453 NA promoter-TSS (NM_001255991) promoter-TSS (NM_001255991) -14 NM_001255991 100503185 Mm.366650 NM_001255991 ENSMUSG00000111375 Btbd8 EG627196|Gm16115|OTTMUSG00000030610 BTB (POZ) domain containing 8 protein-coding common_peak1_64_365_0.261214682048854_8.64630717930847_1.78210322865453 chr11 100860431 100861348 + 1.78210322865453 NA intron (NM_011488, intron 2 of 19) intron (NM_011488, intron 2 of 19) 405 NM_001164062 20850 Mm.277403 NM_011488 ENSMUSG00000004043 Stat5a AA959963|STAT5 signal transducer and activator of transcription 5A protein-coding common_peak1_55_439_-0.268182652320379_8.64726838736447_1.78210322865453 chr1 151683409 151684551 + 1.78210322865453 NA intron (NM_022018, intron 5 of 13) Lx4A|LINE|L1 -71394 NM_001311165 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding common_peak2_45_353_-0.302532434803132_8.31633933268143_1.78161923548137 chr4 139616186 139617477 + 1.78161923548137 NA 3' UTR (NM_183148, exon 12 of 12) 3' UTR (NM_183148, exon 12 of 12) -6063 NM_175438 212647 Mm.273571 NM_175438 ENSMUSG00000028737 Aldh4a1 A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1 aldehyde dehydrogenase 4 family, member A1 protein-coding unique_peak2_45_353_-0.302532434803132_8.31633933268143_1.78161923548137 chr11 96912072 96913678 + 1.78161923548137 NA intron (NM_001308183, intron 4 of 12) intron (NM_001308183, intron 4 of 12) 3639 NM_001308183 80280 Mm.28297 NM_030248 ENSMUSG00000018669 Cdk5rap3 1810007E24Rik|BC002318|C53|C81486|HSF-27|IC53|LZAP|MST016 CDK5 regulatory subunit associated protein 3 protein-coding common_peak1_277_2800_-0.103129176095548_11.4001616800267_1.78154005206671 chr15 80798654 80801665 + 1.78154005206671 NA intron (NM_177124, intron 1 of 21) intron (NM_177124, intron 1 of 21) 1549 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak2_161_1213_0.147401687923553_10.3192535502175_1.78080110560399 chr8 120744974 120749561 + 1.78080110560399 NA exon (NM_001301811, exon 5 of 9) exon (NM_001301811, exon 5 of 9) 8628 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_102_878_-0.188171471366665_9.68563361946007_1.78075571303388 chr10 117434396 117435735 + 1.78075571303388 NA Intergenic Intergenic -58092 NM_001310609 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding common_peak1_18_64_0.577996390368436_6.31136600821267_1.78026981523164 chr10 81402186 81402620 + 1.78026981523164 NA intron (NM_026756, intron 8 of 8) intron (NM_026756, intron 8 of 8) 9339 NM_001099917 72273 Mm.253147 NM_001099917 ENSMUSG00000078439 Smim24 2210404O07Rik small integral membrane protein 24 protein-coding common_peak1_18_64_0.577996390368436_6.31136600821267_1.78026981523164-2 chr15 102115307 102115711 + 1.78026981523164 NA intron (NM_153533, intron 26 of 28) B4A|SINE|B4 12521 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding common_peak2_18_64_0.577996390368436_6.31136600821267_1.78026981523164 chr14 46760516 46761024 + 1.78026981523164 NA intron (NM_028222, intron 1 of 7) CpG 229 NM_028222 72391 Mm.272394 NM_028222 ENSMUSG00000037628 Cdkn3 2410006H10Rik|KAP cyclin-dependent kinase inhibitor 3 protein-coding common_peak1_14_108_-0.586140203365578_6.47511422309414_1.779971540906-2 chr9 21029682 21030079 + 1.779971540906 NA intron (NM_023892, intron 1 of 2) intron (NM_023892, intron 1 of 2) 507 NM_023892 78369 Mm.30220 NM_023892 ENSMUSG00000001014 Icam4 1810015M19Rik|Cd242|ICAM-4 intercellular adhesion molecule 4, Landsteiner-Wiener blood group protein-coding unique_peak2_14_108_-0.586140203365578_6.47511422309414_1.779971540906 chr11 57668846 57669574 + 1.779971540906 NA intron (NM_134189, intron 1 of 11) intron (NM_134189, intron 1 of 11) 23768 NM_134189 171212 Mm.271670 NM_134189 ENSMUSG00000020520 Galnt10 AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 protein-coding unique_peak2_14_108_-0.586140203365578_6.47511422309414_1.779971540906-2 chr2 117122498 117123536 + 1.779971540906 NA intron (NM_033524, intron 1 of 6) intron (NM_033524, intron 1 of 6) 1946 NM_033524 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding common_peak1_14_108_-0.586140203365578_6.47511422309414_1.779971540906 chr1 134987639 134987979 + 1.779971540906 NA exon (NM_001033409, exon 18 of 18) exon (NM_001033409, exon 18 of 18) 25244 NM_001278115 67196 Mm.284587 NM_026024 ENSMUSG00000026429 Ube2t 2700084L22Rik|C80607 ubiquitin-conjugating enzyme E2T protein-coding common_peak2_94_800_-0.197188642133499_9.54706411134196_1.77988129618664 chr3 115887082 115888857 + 1.77988129618664 NA promoter-TSS (NR_027894) promoter-TSS (NR_027894) 90 NR_027894 68161 Mm.392043 NR_015487 ENSMUSG00000054426 A930005H10Rik - RIKEN cDNA A930005H10 gene ncRNA common_peak2_46_235_0.320488038064176_8.04288706839393_1.77915915657192 chr10 41956904 41958534 + 1.77915915657192 NA intron (NM_001034858, intron 10 of 17) intron (NM_001034858, intron 10 of 17) 60663 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak2_70_574_-0.23425859998472_9.05028884583938_1.77851354609865-2 chr2 131351908 131353520 + 1.77851354609865 NA intron (NM_178607, intron 1 of 5) CpG 178 NM_178607 51902 Mm.477523 NM_178607 ENSMUSG00000048911 Rnf24 2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e ring finger protein 24 protein-coding common_peak2_70_574_-0.23425859998472_9.05028884583938_1.77851354609865 chr15 43476978 43478014 + 1.77851354609865 NA promoter-TSS (NR_046064) promoter-TSS (NR_046064) 267 NM_025736 66736 Mm.244512 NM_025736 ENSMUSG00000022337 Emc2 4921531G14Rik|AV060620|AW209495|Ttc35 ER membrane protein complex subunit 2 protein-coding common_peak1_97_630_0.201992353114491_9.4024923715398_1.77809789595038 chr14 115040783 115041907 + 1.77809789595038 NA Intergenic CpG -2326 NR_029785 723905 NR_029785 ENSMUSG00000065508 Mir17 Mirn17|mir-17|mmu-mir-17 microRNA 17 ncRNA common_peak2_97_630_0.201992353114491_9.4024923715398_1.77809789595038 chr19 5510025 5513013 + 1.77809789595038 NA Intergenic Intergenic -1030 NM_001024560 225861 Mm.20071 NM_001024560 ENSMUSG00000056185 Snx32 B930037P14Rik|Snx6b sorting nexin 32 protein-coding common_peak2_117_804_0.179293743226202_9.74249184461508_1.77799979655584 chr8 33606031 33609348 + 1.77799979655584 NA intron (NM_017374, intron 1 of 6) intron (NM_017374, intron 1 of 6) 8068 NM_017374 19053 Mm.29301 NM_017374 ENSMUSG00000009630 Ppp2cb AI115466|D8Ertd766e|PP2Ac protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform protein-coding common_peak2_112_759_0.185663889841454_9.66268755325167_1.77713668676403 chr5 125177279 125180109 + 1.77713668676403 NA intron (NM_001253904, intron 1 of 47) CpG 520 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_109_946_-0.179317285896113_9.79756197252033_1.77642437706669 chr8 54528854 54530736 + 1.77642437706669 NA exon (NM_029701, exon 1 of 5) exon (NM_029701, exon 1 of 5) 203 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak1_51_270_0.299884514473417_8.23209129859058_1.77637268753426 chr1 138250887 138251854 + 1.77637268753426 NA Intergenic MTA_Mm|LTR|ERVL-MaLR -22368 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_44_344_-0.3042739141009_8.27831559461508_1.77634118360166 chr7 3617176 3618025 + 1.77634118360166 NA intron (NM_025348, intron 1 of 3) intron (NM_025348, intron 1 of 3) 227 NM_025348 66091 Mm.17851 NM_025348 ENSMUSG00000035674 Ndufa3 1010001M12Rik|1700022J01Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 protein-coding common_peak2_102_673_0.19494310259488_9.4940763324793_1.77502876328202 chr4 59580651 59582294 + 1.77502876328202 NA promoter-TSS (NM_001301367) promoter-TSS (NM_001301367) -91 NM_001301367 72479 Mm.272905 NM_024255 ENSMUSG00000028383 Hsdl2 2610207I16Rik hydroxysteroid dehydrogenase like 2 protein-coding unique_peak2_38_181_0.365148809409164_7.69036904490328_1.77485074599377 chr5 140513764 140514957 + 1.77485074599377 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 8751 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak1_38_181_0.365148809409164_7.69036904490328_1.77485074599377 chr3 159841634 159842267 + 1.77485074599377 NA intron (NM_026582, intron 1 of 11) intron (NM_026582, intron 1 of 11) 2255 NM_026582 68151 Mm.6766 NM_026582 ENSMUSG00000028173 Wls 5031439A09Rik|AI173978|AI987742|Gpr177 wntless homolog (Drosophila) protein-coding common_peak1_168_1558_-0.138591364168375_10.5371095306136_1.77386865861962 chr14 54074001 54076369 + 1.77386865861962 NA Intergenic Intergenic 178744 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_76_629_-0.222486477614213_9.18796477958017_1.77381766814438 chr14 101653665 101654663 + 1.77381766814438 NA intron (NM_016723, intron 1 of 8) CpG 197 NM_016723 50933 Mm.275970 NM_016723 ENSMUSG00000022111 Uchl3 - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) protein-coding common_peak2_55_298_0.289175387006177_8.36858936770119_1.77379000985645-2 chr7 114159862 114161889 + 1.77379000985645 NA Intergenic RSINE1|SINE|B4 -43094 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak2_55_298_0.289175387006177_8.36858936770119_1.77379000985645 chr2 145902955 145903922 + 1.77379000985645 NA intron (NM_026425, intron 1 of 5) CpG 197 NM_001141965 67877 Mm.151168 NM_026425 ENSMUSG00000002728 Naa20 1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding common_peak2_54_430_-0.270253040703183_8.61641753873751_1.77351126790842 chrX 74392502 74394040 + 1.77351126790842 NA promoter-TSS (NM_001161423) promoter-TSS (NM_001161423) 3 NM_025473 66294 Mm.166485 NM_025473 ENSMUSG00000031399 Fam3a 1810037C20Rik family with sequence similarity 3, member A protein-coding common_peak2_190_1500_0.132663244366105_10.6180398838037_1.77285882863533 chr1 152766421 152768385 + 1.77285882863533 NA intron (NM_026369, intron 1 of 3) intron (NM_026369, intron 1 of 3) 861 NM_026369 67771 Mm.288974 NM_026369 ENSMUSG00000008475 Arpc5 5830443F10Rik|p16-Arc actin related protein 2/3 complex, subunit 5 protein-coding common_peak1_152_1127_0.152253940881947_10.2156783228398_1.77269336089695 chr16 97996497 97998258 + 1.77269336089695 NA promoter-TSS (NR_130962) promoter-TSS (NR_130962) 30 NR_130962 245305 Mm.148033 NR_130962 B230307C23Rik EG245305|OTTMUSG00000028475 RIKEN cDNA B230307C23 gene ncRNA common_peak1_154_1146_0.151138115596803_10.2392187338142_1.77185690655486-2 chr13 93896619 93898675 + 1.77185690655486 NA intron (NM_009712, intron 6 of 7) intron (NM_009712, intron 6 of 7) 106870 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak1_154_1146_0.151138115596803_10.2392187338142_1.77185690655486 chr1 91398004 91399395 + 1.77185690655486 NA promoter-TSS (NM_023343) promoter-TSS (NM_023343) 84 NM_023343 67444 Mm.337240 NM_023343 ENSMUSG00000026309 Ilkap 0710007A14Rik|1600009O09Rik|PP2C-DELTA integrin-linked kinase-associated serine/threonine phosphatase 2C protein-coding common_peak2_114_777_0.182940045985637_9.69509636797901_1.77182951868452 chr14 21749782 21751669 + 1.77182951868452 NA exon (NM_026283, exon 1 of 6) exon (NM_026283, exon 1 of 6) 194 NM_026283 67630 Mm.102765 NM_026283 ENSMUSG00000021770 Samd8 1110053F04Rik|1700010P07Rik|SMSr sterile alpha motif domain containing 8 protein-coding common_peak2_381_3626_0.0864227872028707_11.8677724235717_1.77150462407702 chr10 80621282 80625676 + 1.77150462407702 NA intron (NM_134002, intron 1 of 10) intron (NM_134002, intron 1 of 10) 699 NM_134002 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding unique_peak2_35_269_-0.345517923991808_7.90405663505493_1.77124201176878 chr6 113330118 113331516 + 1.77124201176878 NA intron (NM_010957, intron 3 of 6) ORR1A4|LTR|ERVL-MaLR 3841 NM_010957 18294 Mm.43612 NM_010957 ENSMUSG00000030271 Ogg1 Mmh 8-oxoguanine DNA-glycosylase 1 protein-coding common_peak1_35_269_-0.345517923991808_7.90405663505493_1.77124201176878 chr10 21245083 21245860 + 1.77124201176878 NA Intergenic Intergenic -50508 NM_001042593 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak1_36_278_-0.344337660617777_7.9519524815203_1.77119818809796 chr12 102370731 102371619 + 1.77119818809796 NA intron (NM_001161365, intron 6 of 9) intron (NM_001161365, intron 6 of 9) 68522 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding unique_peak2_62_501_-0.24993439399899_8.84657635695128_1.77110091191847 chr11 121803251 121805448 + 1.77110091191847 NA Intergenic Intergenic -25869 NM_029049 74675 Mm.61213 NM_029049 ENSMUSG00000039198 Ptchd3 4930451E13Rik|4933440L20Rik|RNDEu-3 patched domain containing 3 protein-coding common_peak2_70_411_0.246659018663799_8.80983003651512_1.77078850036945 chr18 67448281 67449367 + 1.77078850036945 NA intron (NM_027130, intron 1 of 16) CpG 312 NM_027130 69597 Mm.426052 NM_027130 ENSMUSG00000024527 Afg3l2 2310036I02Rik|AW260507|Emv66|par AFG3-like AAA ATPase 2 protein-coding unique_peak2_19_69_0.56185121068581_6.41020862228787_1.77011778727375-2 chrX 159689643 159690416 + 1.77011778727375 NA intron (NM_001135727, intron 2 of 17) MIRb|SINE|MIR -18572 NM_021389 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_19_69_0.56185121068581_6.41020862228787_1.77011778727375 chr1 131200874 131201322 + 1.77011778727375 NA promoter-TSS (NM_001311094) promoter-TSS (NM_001311094) -913 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak1_19_69_0.56185121068581_6.41020862228787_1.77011778727375-3 chr8 88305524 88305956 + 1.77011778727375 NA intron (NM_001037724, intron 3 of 27) intron (NM_001037724, intron 3 of 27) 11536 NM_001037724 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding common_peak1_19_69_0.56185121068581_6.41020862228787_1.77011778727375-4 chrX 48440650 48441165 + 1.77011778727375 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 22225 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding unique_peak2_19_69_0.56185121068581_6.41020862228787_1.77011778727375 chr1 13301026 13301597 + 1.77011778727375 NA intron (NM_008678, intron 1 of 22) intron (NM_008678, intron 1 of 22) 71118 NM_001302702 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding common_peak1_19_69_0.56185121068581_6.41020862228787_1.77011778727375-2 chr7 101315711 101316220 + 1.77011778727375 NA Intergenic Intergenic -5354 NM_019990 56018 Mm.28896 NM_019990 ENSMUSG00000030688 Stard10 AV048538|CGI-52|NY-C0-28|PC-TP2|PCTP2|Pctpl|Sdccag28|SdccagG28|TISP-81 START domain containing 10 protein-coding common_peak1_20_152_-0.479913198894154_7.01743124324557_1.76937126886395 chr12 25336842 25337423 + 1.76937126886395 NA Intergenic Intergenic 207958 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_20_152_-0.479913198894154_7.01743124324557_1.76937126886395 chr19 11091901 11092742 + 1.76937126886395 NA Intergenic CpG -11218 NM_022430 64381 Mm.34460 NM_022430 ENSMUSG00000024730 Ms4a8a 2010004L09Rik|AI481240|CD20L5|Ms4a8 membrane-spanning 4-domains, subfamily A, member 8A protein-coding unique_peak2_20_152_-0.479913198894154_7.01743124324557_1.76937126886395 chr4 124730861 124732229 + 1.76937126886395 NA promoter-TSS (NR_030479) promoter-TSS (NR_030479) -149 NR_030479 735277 NR_030479 ENSMUSG00000076271 Mir697 Mirn697|mmu-mir-697 microRNA 697 ncRNA common_peak1_118_1036_-0.171127808573582_9.93263627452643_1.76931171261144 chr16 77013755 77014601 + 1.76931171261144 NA intron (NM_013918, intron 1 of 23) CpG 109 NM_013918 30940 Mm.40986 NM_013918 ENSMUSG00000022867 Usp25 - ubiquitin specific peptidase 25 protein-coding common_peak2_141_1023_0.159771857033373_10.0798859285167_1.76891503581929 chr6 108827906 108830245 + 1.76891503581929 NA exon (NM_138677, exon 1 of 12) exon (NM_138677, exon 1 of 12) 434 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding common_peak2_59_328_0.273324970048819_8.49860625875965_1.76890364220497 chr5 37036318 37037782 + 1.76890364220497 NA Intergenic Intergenic -13807 NM_178394 76071 Mm.85280 NM_178394 ENSMUSG00000063646 Jakmip1 5830437M04Rik|C330021K24Rik|Gababrbp|Marlin-1 janus kinase and microtubule interacting protein 1 protein-coding common_peak2_73_434_0.241524371661676_8.88563377656693_1.76874786063283 chr12 28799650 28801679 + 1.76874786063283 NA intron (NM_201357, intron 3 of 8) intron (NM_201357, intron 3 of 8) 48836 NM_201357 380752 Mm.273724 NM_201357 ENSMUSG00000036613 Tssc1 D12Ertd604e|Eipr1 tumor suppressing subtransferable candidate 1 protein-coding common_peak1_58_466_-0.261752334667836_8.73640257237574_1.76819763826334 chr19 5466194 5467247 + 1.76819763826334 NA exon (NM_009985, exon 4 of 10) exon (NM_009985, exon 4 of 10) 1787 NM_009985 13041 Mm.113590 NM_009985 ENSMUSG00000024910 Ctsw lymphopain cathepsin W protein-coding common_peak2_269_2335_0.107100906024254_11.2433750118921_1.76786411852908 chr1 87213173 87215834 + 1.76786411852908 NA intron (NM_001039169, intron 1 of 6) MIRb|SINE|MIR 564 NM_001039169 26987 Mm.227183 NM_023314 ENSMUSG00000026254 Eif4e2 2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3 eukaryotic translation initiation factor 4E member 2 protein-coding common_peak2_136_1220_-0.157509928452544_10.1750925207611_1.7673696343981 chr11 95413158 95415573 + 1.7673696343981 NA 5' UTR (NM_025287, exon 2 of 11) 5' UTR (NM_025287, exon 2 of 11) 282 NM_025287 20747 Mm.285454 NM_025287 ENSMUSG00000057522 Spop AI315626|Pcif1|TEF2 speckle-type POZ protein protein-coding common_peak2_50_263_0.303276657769002_8.19603244824296_1.76708828710054-2 chr8 88297233 88298883 + 1.76708828710054 NA intron (NM_001037724, intron 3 of 27) intron (NM_001037724, intron 3 of 27) 3854 NM_001037724 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding common_peak2_50_263_0.303276657769002_8.19603244824296_1.76708828710054 chr19 45363639 45364377 + 1.76708828710054 NA intron (NM_009771, intron 1 of 13) intron (NM_009771, intron 1 of 13) 274 NM_001037758 12234 Mm.119717 NM_009771 ENSMUSG00000025217 Btrc Beta-Trcp1|E3RS-IkappaB|E3RSIkappaB|FWD1|Fbw1a|HOS|Slimb|b-TrCP|beta-TrCP beta-transducin repeat containing protein protein-coding common_peak1_50_263_0.303276657769002_8.19603244824296_1.76708828710054 chr7 19024327 19025061 + 1.76708828710054 NA intron (NM_026605, intron 1 of 26) intron (NM_026605, intron 1 of 26) 317 NM_026605 68188 Mm.130902 NM_026605 ENSMUSG00000023118 Sympk 1500016F02Rik|4632415H16Rik|AA125406|AI449890|SPK|SYM symplekin protein-coding common_peak1_21_159_-0.462130352193411_7.09086291879066_1.76705751721084 chr2 126152134 126152561 + 1.76705751721084 NA promoter-TSS (NM_029455) promoter-TSS (NM_029455) 206 NM_026981 69185 Mm.29019 NM_026981 ENSMUSG00000023330 Dtwd1 1810033A06Rik DTW domain containing 1 protein-coding common_peak2_21_159_-0.462130352193411_7.09086291879066_1.76705751721084 chr18 47331882 47332798 + 1.76705751721084 NA intron (NM_018744, intron 1 of 18) Lx6|LINE|L1 36528 NM_018744 20358 Mm.40909 NM_018744 ENSMUSG00000019647 Sema6a A730020P05Rik|AI851735|Sema6A-1|Semaq|VIa sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A protein-coding common_peak1_21_159_-0.462130352193411_7.09086291879066_1.76705751721084-3 chr9 75436093 75436613 + 1.76705751721084 NA Intergenic Intergenic -5171 NM_001039522 235497 Mm.41508 NM_001006122 ENSMUSG00000042487 Leo1 Gm185 Leo1, Paf1/RNA polymerase II complex component protein-coding common_peak1_21_159_-0.462130352193411_7.09086291879066_1.76705751721084-2 chr5 72731902 72732365 + 1.76705751721084 NA intron (NM_001289495, intron 4 of 14) PB1D10|SINE|Alu 4469 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_90_761_-0.201302144773274_9.47299611510669_1.76671219155112 chr14 67071653 67072533 + 1.76671219155112 NA exon (NM_028032, exon 1 of 10) exon (NM_028032, exon 1 of 10) 378 NM_028032 71978 Mm.273997 NM_028032 ENSMUSG00000022052 Ppp2r2a 2410004D02Rik|mKIAA1541 protein phosphatase 2, regulatory subunit B, alpha protein-coding common_peak1_43_336_-0.310194727301552_8.24150741753108_1.76663026183135 chrX 163908237 163908865 + 1.76663026183135 NA promoter-TSS (NM_026887) promoter-TSS (NM_026887) -466 NM_001290378 108012 Mm.426783 NM_026887 ENSMUSG00000031367 Ap1s2 1500012A13Rik|AI853648|EST1 adaptor-related protein complex 1, sigma 2 subunit protein-coding common_peak1_138_1240_-0.155302619337755_10.1996360904615_1.76622865660079 chr19 42518314 42519641 + 1.76622865660079 NA intron (NM_177464, intron 1 of 6) CpG 172 NM_177464 52013 Mm.254169 NM_177464 ENSMUSG00000025184 R3hcc1l 1700036B12Rik|AI450607|C10orf28|D19Ertd386e|GIDRP86|Gidrp88 R3H domain and coiled-coil containing 1 like protein-coding common_peak1_34_261_-0.351977287013916_7.85743435803049_1.76588472926021-2 chr7 139212529 139213090 + 1.76588472926021 NA promoter-TSS (NM_027164) promoter-TSS (NM_027164) -179 NM_027164 76612 Mm.17757 NM_027164 ENSMUSG00000015980 Lrrc27 1700071K18Rik|2310044E02Rik leucine rich repeat containing 27 protein-coding common_peak1_34_261_-0.351977287013916_7.85743435803049_1.76588472926021 chr19 14351968 14352730 + 1.76588472926021 NA Intergenic Intergenic 86157 NR_003027 19862 NR_003027 ENSMUSG00000095132 Rnu6 - U6 small nuclear RNA snRNA unique_peak2_34_261_-0.351977287013916_7.85743435803049_1.76588472926021 chr7 137575828 137577165 + 1.76588472926021 NA Intergenic Intergenic 138822 NR_033611 620016 Mm.388932 NR_033611 ENSMUSG00000100863 Gm12669 OTTMUSG00000007920 glutaredoxin 3 pseudogene pseudo common_peak1_66_380_0.256896512656402_8.70209544382152_1.76582153965479 chr19 8251632 8252758 + 1.76582153965479 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -33356 NM_172776 236293 Mm.440581 NM_172776 ENSMUSG00000075044 Slc22a29 D630002G06Rik solute carrier family 22. member 29 protein-coding common_peak1_132_940_0.165849399933824_9.96097561269545_1.76574958665744 chr12 55465142 55467048 + 1.76574958665744 NA intron (NR_035430, intron 1 of 3) intron (NR_035430, intron 1 of 3) 26552 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak1_37_175_0.367544895945949_7.64320406661027_1.76574301556797 chr16 35768845 35769547 + 1.76574301556797 NA exon (NM_153550, exon 1 of 9) exon (NM_153550, exon 1 of 9) 160 NM_153550 224132 Mm.24094 NM_153550 ENSMUSG00000022848 Dirc2 RCC4 disrupted in renal carcinoma 2 (human) protein-coding common_peak1_37_175_0.367544895945949_7.64320406661027_1.76574301556797-2 chr6 127637076 127637859 + 1.76574301556797 NA Intergenic Intergenic 59492 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak2_108_936_-0.18016300212955_9.78182373659441_1.76533658638038 chr10 127311025 127312781 + 1.76533658638038 NA promoter-TSS (NM_001171582) promoter-TSS (NM_001171582) -117 NM_001171582 216443 Mm.28173 NM_001003913 ENSMUSG00000040354 Mars Metrs|Mtrns methionine-tRNA synthetase protein-coding common_peak1_267_2313_0.107595173414946_11.229970735815_1.76528642047105 chr5 33651507 33652939 + 1.76528642047105 NA TTS (NM_026698) TTS (NM_026698) 351 NM_001289724 20492 Mm.4172 NM_009193 ENSMUSG00000004642 Slbp - stem-loop binding protein protein-coding common_peak2_72_592_-0.229569268160375_9.09710366046582_1.76520769036997 chr6 40470735 40472230 + 1.76520769036997 NA promoter-TSS (NM_028358) promoter-TSS (NM_028358) 14 NM_001286663 381760 Mm.276356 NM_028358 ENSMUSG00000029911 Ssbp1 2810480P10Rik|G630031O20Rik|MtSSB|mtDBP single-stranded DNA binding protein 1 protein-coding common_peak1_87_732_-0.204647023067148_9.41534587660024_1.76511972967952 chr5 125137172 125138283 + 1.76511972967952 NA intron (NM_011424, intron 1 of 46) intron (NM_011424, intron 1 of 46) 41487 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak2_103_887_-0.185769999336461_9.70153086668187_1.76476578082841 chr10 92721552 92723164 + 1.76476578082841 NA promoter-TSS (NM_008682) promoter-TSS (NM_008682) 60 NM_008682 17997 Mm.2998 NM_008682 ENSMUSG00000019988 Nedd1 - neural precursor cell expressed, developmentally down-regulated gene 1 protein-coding common_peak2_179_1677_-0.13312374050248_10.6459651301886_1.76469674087662 chr15 86212823 86215436 + 1.76469674087662 NA promoter-TSS (NM_145476) promoter-TSS (NM_145476) -330 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak2_191_1510_0.132324456486336_10.627450173408_1.76355448944393 chr17 31657439 31659673 + 1.76355448944393 NA intron (NM_024187, intron 1 of 7) CpG 198 NM_024187 108121 Mm.379289 NM_024187 ENSMUSG00000061613 U2af1 2010107D16Rik|35kDa U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 protein-coding common_peak2_78_647_-0.217750911771308_9.23097454699897_1.76326782565936 chr4 149758052 149759879 + 1.76326782565936 NA intron (NM_027460, intron 2 of 6) intron (NM_027460, intron 2 of 6) 15302 NM_027460 70556 Mm.41877 NM_027460 ENSMUSG00000028982 Slc25a33 5730438N18Rik|Pnc1 solute carrier family 25, member 33 protein-coding common_peak1_48_378_-0.289177801260408_8.42146513754089_1.76284693354716 chr4 123561710 123562869 + 1.76284693354716 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -54131 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak2_84_704_-0.209837599433664_9.35656064756932_1.76248578672759 chr14 65836802 65838325 + 1.76248578672759 NA intron (NM_145944, intron 1 of 8) CpG 261 NM_145944 67179 Mm.214576 NM_145944 ENSMUSG00000022035 Ccdc25 2610528H13Rik|NSrp70 coiled-coil domain containing 25 protein-coding common_peak1_42_327_-0.311824834364133_8.20163958743602_1.76210804580398 chr16 62846343 62846978 + 1.76210804580398 NA intron (NM_026577, intron 1 of 9) CpG 380 NM_026577 68146 Mm.96833 NM_026577 ENSMUSG00000022911 Arl13b A530097K21Rik|A930014M17Rik|Arl2l1|C530009C10Rik|hnn ADP-ribosylation factor-like 13B protein-coding unique_peak2_42_327_-0.311824834364133_8.20163958743602_1.76210804580398 chr3 101290052 101291695 + 1.76210804580398 NA Intergenic RMER4B|LTR|ERVK -2934 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding unique_peak2_33_253_-0.358536114611638_7.80941662946635_1.76113718242432 chr15 58654216 58655682 + 1.76113718242432 NA Intergenic Intergenic 168478 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding common_peak1_144_1303_-0.151959252840188_10.272748527811_1.76053038993915 chr12 76308267 76309491 + 1.76053038993915 NA intron (NM_138745, intron 22 of 27) B1_Mur2|SINE|Alu -16012 NM_001101471 238276 Mm.311452 NM_001101471 ENSMUSG00000021057 Akap5 3526401B18Rik|AKAP 150|AKAP-5|AKAP150|BB098886|Gm258|P150 A kinase (PRKA) anchor protein 5 protein-coding common_peak1_434_4273_0.0795322248843622_12.101137305102_1.76012221819888 chr6 86525161 86527991 + 1.76012221819888 NA promoter-TSS (NM_011865) promoter-TSS (NM_011865) -411 NM_011865 23983 Mm.274146 NM_011865 ENSMUSG00000051695 Pcbp1 WBP17|[a]CP-1|alphaCP-1|hnRNP E1 poly(rC) binding protein 1 protein-coding unique_peak2_15_115_-0.561727732002404_6.57711712912637_1.76010540062269 chr10 44704021 44705071 + 1.76010540062269 NA Intergenic Intergenic -245798 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding unique_peak2_15_115_-0.561727732002404_6.57711712912637_1.76010540062269-2 chr8 122775349 122776164 + 1.76010540062269 NA intron (NM_144932, intron 1 of 9) CpG 251 NM_144932 257633 Mm.334875 NM_144932 ENSMUSG00000015016 Acsf3 BB101783 acyl-CoA synthetase family member 3 protein-coding common_peak2_15_115_-0.561727732002404_6.57711712912637_1.76010540062269 chr17 5173827 5174607 + 1.76010540062269 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 179143 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_15_115_-0.561727732002404_6.57711712912637_1.76010540062269 chr5 99267724 99268142 + 1.76010540062269 NA Intergenic Intergenic -15006 NM_145839 320292 Mm.259074 NM_145839 ENSMUSG00000089809 Rasgef1b 4732452O09Rik|GPIgamma4|Gpig4 RasGEF domain family, member 1B protein-coding common_peak2_110_956_-0.17845694712133_9.81314664092536_1.76002879835769 chr11 119932134 119935017 + 1.76002879835769 NA Intergenic Intergenic -9517 NM_001037754 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding common_peak1_124_1096_-0.16522703138849_10.0167342947089_1.75965657365884 chr12 115257028 115259028 + 1.75965657365884 NA Intergenic Intergenic 437766 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA common_peak2_68_555_-0.236345752476712_9.00076819648515_1.75921895654256 chr11 72341595 72343413 + 1.75921895654256 NA Intergenic Intergenic 18792 NM_001282007 21689 Mm.42257 NM_011569 ENSMUSG00000020799 Tekt1 MT14 tektin 1 protein-coding common_peak1_98_639_0.199526368926803_9.42169127935076_1.7587158659426 chr2 26603489 26604682 + 1.7587158659426 NA exon (NM_026212, exon 1 of 6) exon (NM_026212, exon 1 of 6) 332 NM_026212 67512 Mm.24244 NM_026212 ENSMUSG00000026922 Agpat2 2510002J07Rik|AV000834|BSCL|BSCL1|LPAAB|LPAAT-beta 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) protein-coding common_peak1_165_1252_0.144947481032844_10.3636444398383_1.75827220670504 chr8 85298783 85300472 + 1.75827220670504 NA promoter-TSS (NR_028268) promoter-TSS (NR_028268) -5 NM_001163791 56452 Mm.29709 NM_019716 ENSMUSG00000031697 Orc6 6720420I10Rik|Orc6l origin recognition complex, subunit 6 protein-coding common_peak1_49_256_0.307002954128862_8.15912602625831_1.75807654523545 chr10 80985482 80986235 + 1.75807654523545 NA intron (NM_010319, intron 2 of 3) CpG 15507 NM_001038655 14708 Mm.222496 NM_010319 ENSMUSG00000048240 Gng7 AI840417 guanine nucleotide binding protein (G protein), gamma 7 protein-coding common_peak1_49_256_0.307002954128862_8.15912602625831_1.75807654523545-2 chr2 37702396 37703360 + 1.75807654523545 NA Intergenic CpG -55593 NM_009261 20744 Mm.237095 NM_009261 ENSMUSG00000026915 Strbp 6430510M02Rik|AI852513|C230082I21Rik|C86322|Spnr spermatid perinuclear RNA binding protein protein-coding common_peak1_23_174_-0.437435643740234_7.23249328996221_1.75764407542732 chr9 66873087 66873699 + 1.75764407542732 NA intron (NM_173413, intron 1 of 7) B2_Mm2|SINE|B2 -38687 NM_026674 68318 Mm.284229 NM_026674 ENSMUSG00000053040 Aph1c 0610008A10Rik|APH-1b|Aph1b aph1 homolog C, gamma secretase subunit protein-coding common_peak1_14_45_0.658482165354335_5.85280303873418_1.75762453057466 chr3 139041315 139041695 + 1.75762453057466 NA intron (NM_145544, intron 2 of 13) intron (NM_145544, intron 2 of 13) 33696 NM_145544 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding unique_peak1_14_45_0.658482165354335_5.85280303873418_1.75762453057466 chr11 106657858 106658269 + 1.75762453057466 NA intron (NM_001032378, intron 13 of 13) intron (NM_001032378, intron 13 of 13) -45133 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding common_peak1_14_45_0.658482165354335_5.85280303873418_1.75762453057466-2 chr5 38898696 38899076 + 1.75762453057466 NA Intergenic GA-rich|Low_complexity|Low_complexity -22193 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak1_167_1272_0.14329487345621_10.3856641406295_1.75761122830087 chr15 72809145 72811411 + 1.75761122830087 NA promoter-TSS (NR_002864) promoter-TSS (NR_002864) 46 NR_002864 353342 Mm.440245 NR_002864 ENSMUSG00000106847 Peg13 - paternally expressed 13 ncRNA common_peak1_36_169_0.370392715073709_7.59458729367456_1.75714625384867 chr11 51854829 51855538 + 1.75714625384867 NA intron (NM_199299, intron 1 of 11) intron (NM_199299, intron 1 of 11) 2298 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak2_35_162_0.382569518827946_7.54001291364505_1.75690402381471-2 chr5 108660134 108660986 + 1.75690402381471 NA exon (NM_199011, exon 1 of 23) exon (NM_199011, exon 1 of 23) 209 NM_199011 110524 Mm.260921 NM_199011 ENSMUSG00000004815 Dgkq 110kDa|DAGK|DAGK7|Dagk4|Dgkd diacylglycerol kinase, theta protein-coding common_peak2_35_162_0.382569518827946_7.54001291364505_1.75690402381471 chr3 135603011 135604156 + 1.75690402381471 NA intron (NM_008689, intron 16 of 24) intron (NM_008689, intron 16 of 24) 87964 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_305_2739_0.0984574266192073_11.4691888911575_1.75681187278833 chr14 66278014 66282917 + 1.75681187278833 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) 587 NM_172498 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_184_1731_-0.130333976636994_10.6930562264082_1.75666307954842 chr14 121421682 121424158 + 1.75666307954842 NA Intergenic Intergenic -43690 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_398_3832_0.083776546015125_11.9461465558081_1.75640304462008 chr1 193198565 193202455 + 1.75640304462008 NA intron (NM_153137, intron 2 of 15) intron (NM_153137, intron 2 of 15) 1036 NM_153137 215243 Mm.261259 NM_153137 ENSMUSG00000037318 Traf3ip3 6030423D04Rik|AI115021|T3jam TRAF3 interacting protein 3 protein-coding common_peak2_22_167_-0.453856618685251_7.16538911343614_1.75628873621368 chr8 126723067 126724131 + 1.75628873621368 NA Intergenic Intergenic -130163 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding unique_peak2_22_167_-0.453856618685251_7.16538911343614_1.75628873621368-2 chr7 105943331 105944859 + 1.75628873621368 NA intron (NM_029000, intron 1 of 3) MMETn-int|LTR|ERVK 9872 NM_001243040 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak1_22_167_-0.453856618685251_7.16538911343614_1.75628873621368 chr17 33998555 33999065 + 1.75628873621368 NA intron (NM_001001892, intron 3 of 7) intron (NM_001001892, intron 3 of 7) 1523 NM_001001892 14972 Mm.422886 NM_001001892 ENSMUSG00000061232 H2-K1 H-2K|H-2K(d)|H2-K|K-f histocompatibility 2, K1, K region protein-coding unique_peak2_22_167_-0.453856618685251_7.16538911343614_1.75628873621368 chr16 91790000 91790718 + 1.75628873621368 NA intron (NM_010587, intron 4 of 38) intron (NM_010587, intron 4 of 38) 60988 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding common_peak2_47_369_-0.290993681237861_8.38588461989738_1.75617193855399 chr13 21749356 21751034 + 1.75617193855399 NA TTS (NM_178211) TTS (NM_178211) 358 NM_178211 319160 Mm.255646 NM_178211 ENSMUSG00000064288 Hist1h4k - histone cluster 1, H4k protein-coding common_peak2_323_2945_0.0950249903297422_11.5720542102007_1.75574115301576 chr7 59227464 59230480 + 1.75574115301576 NA 5' UTR (NM_173010, exon 1 of 9) 5' UTR (NM_173010, exon 1 of 9) 220 NM_011668 22215 Mm.9002 NM_011668 ENSMUSG00000025326 Ube3a 4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216 ubiquitin protein ligase E3A protein-coding common_peak1_12_93_-0.625779918223061_6.24169889256611_1.7554924702745 chr9 123835338 123835666 + 1.7554924702745 NA intron (NM_001110253, intron 4 of 17) intron (NM_001110253, intron 4 of 17) 16159 NM_148925 17281 Mm.252941 NM_148925 ENSMUSG00000025241 Fyco1 2810409M01Rik|Mem2|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding unique_peak2_12_93_-0.625779918223061_6.24169889256611_1.7554924702745-2 chr6 86619429 86620052 + 1.7554924702745 NA Intergenic Intergenic -8434 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding unique_peak2_12_93_-0.625779918223061_6.24169889256611_1.7554924702745 chr1 51569101 51569768 + 1.7554924702745 NA Intergenic Intergenic -91035 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak1_160_1471_-0.141565042698033_10.452779434708_1.75459808968948 chr10 79680933 79682749 + 1.75459808968948 NA promoter-TSS (NM_177613) promoter-TSS (NM_177613) -354 NM_177613 216150 Mm.21981 NM_177613 ENSMUSG00000020307 Cdc34 AI327276|UBE2R1 cell division cycle 34 protein-coding common_peak2_81_498_0.225159570914522_9.07547579079452_1.7538602637436 chr10 60751902 60753375 + 1.7538602637436 NA intron (NM_023596, intron 1 of 5) CpG 144 NM_023596 71279 Mm.284462 NM_023596 ENSMUSG00000020100 Slc29a3 4933435C21Rik|AW987637|Ent3 solute carrier family 29 (nucleoside transporters), member 3 protein-coding common_peak2_31_237_-0.37195218899642_7.70884166880973_1.75373326153315 chr3 53167571 53168402 + 1.75373326153315 NA intron (NM_175386, intron 2 of 3) ORR1B1|LTR|ERVL-MaLR 126439 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968 lipoma HMGIC fusion partner protein-coding common_peak1_31_237_-0.37195218899642_7.70884166880973_1.75373326153315 chr2 167634586 167635194 + 1.75373326153315 NA Intergenic MIRb|SINE|MIR -2885 NM_023230 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak1_31_237_-0.37195218899642_7.70884166880973_1.75373326153315-2 chr6 108875928 108876516 + 1.75373326153315 NA Intergenic Intergenic 47581 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding unique_peak2_31_237_-0.37195218899642_7.70884166880973_1.75373326153315 chr14 121825000 121826221 + 1.75373326153315 NA Intergenic Intergenic -27876 NM_134074 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding unique_peak2_31_237_-0.37195218899642_7.70884166880973_1.75373326153315-2 chr17 10332222 10333395 + 1.75373326153315 NA Intergenic B1_Mus1|SINE|Alu 8206 NR_045461 76634 Mm.491052 NR_045461 ENSMUSG00000099384 1700110C19Rik - RIKEN cDNA 1700110C19 gene ncRNA common_peak2_31_237_-0.37195218899642_7.70884166880973_1.75373326153315-2 chr7 13053868 13054910 + 1.75373326153315 NA intron (NM_145819, intron 1 of 5) CpG 375 NM_001290452 109889 Mm.10103 NM_145819 ENSMUSG00000030380 Mzf1 Mzf-2|Mzf2|Zfp121|Zfp98|Znf42 myeloid zinc finger 1 protein-coding common_peak2_95_614_0.202557490238206_9.3657213453457_1.75362688068131 chr10 89685467 89686767 + 1.75362688068131 NA promoter-TSS (NR_130956) promoter-TSS (NR_130956) 168 NM_198021 213326 Mm.27651 NM_198021 ENSMUSG00000069539 Scyl2 AU015688|AW536445|BC030932|CVAK104|D10Ertd802e SCY1-like 2 (S. cerevisiae) protein-coding common_peak1_95_614_0.202557490238206_9.3657213453457_1.75362688068131 chr6 35132746 35133916 + 1.75362688068131 NA intron (NM_001164412, intron 1 of 10) GA-rich|Low_complexity|Low_complexity 406 NM_001164412 53621 Mm.214525 NM_016877 ENSMUSG00000038784 Cnot4 Not4|Not4h|Not4hp CCR4-NOT transcription complex, subunit 4 protein-coding common_peak2_64_519_-0.245453292695558_8.89964116668068_1.75339125415333 chr10 61305195 61307542 + 1.75339125415333 NA Intergenic Intergenic 8532 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak1_65_373_0.257037798959599_8.67541335936744_1.75312459009739-2 chr4 41740448 41741359 + 1.75312459009739 NA exon (NM_011014, exon 2 of 4) exon (NM_011014, exon 2 of 4) 456 NM_001286540 18391 Mm.425181 NM_011014 ENSMUSG00000036078 Sigmar1 Oprs1|Sig1R|sigma1R sigma non-opioid intracellular receptor 1 protein-coding common_peak1_65_373_0.257037798959599_8.67541335936744_1.75312459009739 chr2 38286627 38287676 + 1.75312459009739 NA 5' UTR (NM_146122, exon 1 of 22) 5' UTR (NM_146122, exon 1 of 22) 233 NM_146122 227801 Mm.314245 NM_146122 ENSMUSG00000035392 Dennd1a 6030446I19Rik|connecdenn DENN/MADD domain containing 1A protein-coding common_peak2_65_373_0.257037798959599_8.67541335936744_1.75312459009739 chr1 181865373 181867919 + 1.75312459009739 NA Intergenic ORR1C2|LTR|ERVL-MaLR -24245 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_43_215_0.331522551716839_7.92064877802189_1.75304455165308 chr14 75283657 75284272 + 1.75304455165308 NA promoter-TSS (NM_026083) promoter-TSS (NM_026083) -409 NM_026083 67302 Mm.74704 NM_026083 ENSMUSG00000022000 Zc3h13 2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618 zinc finger CCCH type containing 13 protein-coding common_peak1_43_215_0.331522551716839_7.92064877802189_1.75304455165308-2 chr7 30241806 30242595 + 1.75304455165308 NA exon (NM_146186, exon 29 of 33) exon (NM_146186, exon 29 of 33) -5435 NM_001289817 381867 Mm.483986 NM_001289817 ENSMUSG00000100512 Ovol3 Gm1903|movo3 ovo like zinc finger 3 protein-coding common_peak1_43_215_0.331522551716839_7.92064877802189_1.75304455165308-3 chrX 49287648 49288264 + 1.75304455165308 NA intron (NM_145951, intron 1 of 15) intron (NM_145951, intron 1 of 15) 286 NM_001271449 209224 Mm.327730 NM_145951 ENSMUSG00000031109 Enox2 APK1|Cova1|tNOX ecto-NOX disulfide-thiol exchanger 2 protein-coding common_peak1_41_319_-0.317841139902507_8.16300752493611_1.75299763773039 chr7 143069175 143069943 + 1.75299763773039 NA intron (NM_138631, intron 1 of 3) CpG 191 NM_001115085 56844 Mm.139675 NM_020285 ENSMUSG00000045752 Tssc4 AA241958|ESTM671070 tumor-suppressing subchromosomal transferable fragment 4 protein-coding common_peak2_83_694_-0.210169901439659_9.33578421689104_1.75255444947005 chr13 64248017 64249680 + 1.75255444947005 NA promoter-TSS (NM_001122989) promoter-TSS (NM_001122989) 148 NR_045798 66503 Mm.443331 NR_045798 ENSMUSG00000097101 1810034E14Rik - RIKEN cDNA 1810034E14 gene ncRNA common_peak1_26_197_-0.407149053240015_7.4257820934596_1.75167886036339-2 chr3 88493113 88493561 + 1.75167886036339 NA promoter-TSS (NM_019390) promoter-TSS (NM_019390) -25 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_26_197_-0.407149053240015_7.4257820934596_1.75167886036339 chr11 115156412 115156921 + 1.75167886036339 NA intron (NM_021411, intron 1 of 8) intron (NM_021411, intron 1 of 8) 2488 NM_021411 58222 Mm.143789 NM_021411 ENSMUSG00000020732 Rab37 B230331O03Rik|B230354I04Rik RAB37, member RAS oncogene family protein-coding unique_peak2_26_197_-0.407149053240015_7.4257820934596_1.75167886036339 chr11 118268817 118270310 + 1.75167886036339 NA intron (NM_001033528, intron 13 of 20) intron (NM_001033528, intron 13 of 20) 20681 NM_001033528 72344 Mm.232293 NM_001033528 ENSMUSG00000033909 Usp36 2700002L06Rik|mKIAA1453 ubiquitin specific peptidase 36 protein-coding common_peak1_77_638_-0.220116360152778_9.20961394087061_1.75144157691138 chr4 135920198 135921565 + 1.75144157691138 NA TTS (NM_001305278) TTS (NM_001305278) 155 NM_024243 71665 Mm.439940 NM_024243 ENSMUSG00000028673 Fuca1 0610006A03Rik|9530055J05Rik|Afuc|Fuca fucosidase, alpha-L- 1, tissue protein-coding common_peak2_121_1066_-0.168212698591097_9.97523811152888_1.75120248743344 chr12 75733020 75736276 + 1.75120248743344 NA intron (NM_030750, intron 1 of 2) intron (NM_030750, intron 1 of 2) 1081 NM_030750 81535 Mm.280199 NM_030750 ENSMUSG00000021054 Sgpp1 AI463453|SPP|SPP1|Spph1 sphingosine-1-phosphate phosphatase 1 protein-coding common_peak1_24_182_-0.429684646147659_7.30085751521021_1.75102861339354 chr7 16285713 16286149 + 1.75102861339354 NA intron (NM_001136471, intron 1 of 13) intron (NM_001136471, intron 1 of 13) 864 NM_001136471 243846 Mm.482401 NM_172297 ENSMUSG00000041375 Ccdc9 2600011L02Rik coiled-coil domain containing 9 protein-coding common_peak2_643_6999_0.0620823290120036_12.8041803712257_1.75032390217172 chr1 52006264 52014944 + 1.75032390217172 NA intron (NM_011487, intron 1 of 23) intron (NM_011487, intron 1 of 23) 2364 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 protein-coding common_peak2_191_1808_-0.127364290970077_10.7572945471362_1.74981206279295 chr6 83793717 83795998 + 1.74981206279295 NA promoter-TSS (NM_019542) promoter-TSS (NM_019542) -200 NM_019542 56174 Mm.190650 NM_019542 ENSMUSG00000034744 Nagk Gnk N-acetylglucosamine kinase protein-coding unique_peak2_27_205_-0.399935777165293_7.48653263860057_1.74973740214435 chr17 50069434 50070985 + 1.74973740214435 NA intron (NM_181397, intron 4 of 9) intron (NM_181397, intron 4 of 9) 120288 NM_181397 76438 Mm.41854 NM_181397 ENSMUSG00000039316 Rftn1 2310015N21Rik|AI853526 raftlin lipid raft linker 1 protein-coding unique_peak2_29_221_-0.385759433752403_7.6015361494739_1.74965527721271 chr5 114134811 114136272 + 1.74965527721271 NA intron (NM_011677, intron 2 of 5) intron (NM_011677, intron 2 of 5) 4385 NM_011677 22256 Mm.1393 NM_011677 ENSMUSG00000029591 Ung UNG1|UNG2 uracil DNA glycosylase protein-coding common_peak1_48_249_0.311091952248598_8.12133026078639_1.74935947878183 chr11 63973408 63974478 + 1.74935947878183 NA intron (NM_178379, intron 6 of 6) intron (NM_178379, intron 6 of 6) 9717 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak1_48_249_0.311091952248598_8.12133026078639_1.74935947878183-2 chr2 132846609 132847397 + 1.74935947878183 NA promoter-TSS (NM_025646) promoter-TSS (NM_025646) 337 NM_001024385 66586 Mm.357342 NM_025646 ENSMUSG00000027357 Crls1 0610009I22Rik|4930557M15Rik|5730490M08Rik cardiolipin synthase 1 protein-coding common_peak1_104_896_-0.183383944242442_9.71727220279804_1.74911795506115-2 chr7 75455372 75456364 + 1.74911795506115 NA intron (NM_029332, intron 1 of 36) CpG 334 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_104_896_-0.183383944242442_9.71727220279804_1.74911795506115 chr12 72843669 72844910 + 1.74911795506115 NA Intergenic Intergenic 73476 NM_029444 75801 Mm.242892 NM_029444 ENSMUSG00000021098 4930447C04Rik 4921504I02Rik|A930035O15Rik|Six6OS|Six6as|Six6os1 RIKEN cDNA 4930447C04 gene protein-coding common_peak2_28_213_-0.392803671888578_7.54506515045686_1.74911372281672-2 chrX 13461717 13462705 + 1.74911372281672 NA Intergenic Intergenic -5461 NM_173415 236690 Mm.90233 NM_173415 ENSMUSG00000051228 Nyx CLNP|CSNB1|CSNB4|nob nyctalopin protein-coding common_peak1_28_213_-0.392803671888578_7.54506515045686_1.74911372281672 chr16 91728193 91728679 + 1.74911372281672 NA promoter-TSS (NM_001110276) promoter-TSS (NM_001110276) 366 NM_026994 66609 Mm.109823 NM_026994 ENSMUSG00000058240 Cryzl1 2210407J23Rik|2410006O11Rik|QOH-1 crystallin, zeta (quinone reductase)-like 1 protein-coding common_peak2_28_213_-0.392803671888578_7.54506515045686_1.74911372281672 chr12 85991554 85992882 + 1.74911372281672 NA intron (NM_001081423, intron 29 of 33) intron (NM_001081423, intron 29 of 33) 86823 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding unique_peak2_28_213_-0.392803671888578_7.54506515045686_1.74911372281672 chr2 165706574 165708050 + 1.74911372281672 NA intron (NM_001271962, intron 5 of 15) intron (NM_001271962, intron 5 of 15) 52014 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding common_peak1_68_396_0.249600123103837_8.75779525869488_1.74786176059669 chr7 113207437 113208244 + 1.74786176059669 NA intron (NM_001243048, intron 1 of 16) CpG 375 NM_007489 11865 Mm.33970 NM_007489 ENSMUSG00000055116 Arntl Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b' aryl hydrocarbon receptor nuclear translocator-like protein-coding common_peak2_126_886_0.169420399872982_9.87750049423756_1.74768693060672 chr4 108578172 108580080 + 1.74768693060672 NA promoter-TSS (NM_011015) promoter-TSS (NM_011015) 210 NM_172697 230596 Mm.157534 NM_172697 ENSMUSG00000063800 Prpf38a 2410002M20Rik PRP38 pre-mRNA processing factor 38 (yeast) domain containing A protein-coding unique_peak2_20_75_0.529547130354913_6.51270107862104_1.74759956072526 chr8 33896633 33897240 + 1.74759956072526 NA intron (NM_001286168, intron 1 of 7) intron (NM_001286168, intron 1 of 7) 32927 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak2_20_75_0.529547130354913_6.51270107862104_1.74759956072526-2 chr5 8838502 8839162 + 1.74759956072526 NA intron (NM_011075, intron 21 of 27) intron (NM_011075, intron 21 of 27) 40685 NM_011075 18669 Mm.146649 NM_011075 ENSMUSG00000028970 Abcb1b Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr ATP-binding cassette, sub-family B (MDR/TAP), member 1B protein-coding common_peak1_20_75_0.529547130354913_6.51270107862104_1.74759956072526 chr4 148940756 148941285 + 1.74759956072526 NA intron (NM_001159344, intron 11 of 20) intron (NM_001159344, intron 11 of 20) 136628 NM_027195 69743 Mm.233879 NM_027195 ENSMUSG00000028977 Casz1 2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e castor zinc finger 1 protein-coding common_peak2_20_75_0.529547130354913_6.51270107862104_1.74759956072526 chr2 27025111 27025698 + 1.74759956072526 NA intron (NM_001177627, intron 3 of 8) intron (NM_001177627, intron 3 of 8) 2594 NM_172659 227659 Mm.41203 NM_172659 ENSMUSG00000036067 Slc2a6 A330096C23|F630103L12Rik|Glut6|Glut9 solute carrier family 2 (facilitated glucose transporter), member 6 protein-coding common_peak1_20_75_0.529547130354913_6.51270107862104_1.74759956072526-2 chr6 129584991 129585371 + 1.74759956072526 NA intron (NM_153590, intron 6 of 6) intron (NM_153590, intron 6 of 6) -6630 NM_010654 16643 Mm.391515 NM_010654 ENSMUSG00000030165 Klrd1 CD94 killer cell lectin-like receptor, subfamily D, member 1 protein-coding common_peak2_518_5338_0.0709912139813209_12.4178494406552_1.7473701676989 chr7 135646019 135654692 + 1.7473701676989 NA intron (NR_015548, intron 2 of 2) intron (NR_015548, intron 2 of 2) -1544 NM_001316681 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak2_42_208_0.338368038173068_7.87654315116742_1.74717495966352 chr4 53713732 53714820 + 1.74717495966352 NA promoter-TSS (NM_139309) promoter-TSS (NM_139309) 94 NM_139309 246179 Mm.247210 NM_139309 ENSMUSG00000028414 Fktn D830030O17Rik|Fcmd fukutin protein-coding common_peak1_42_208_0.338368038173068_7.87654315116742_1.74717495966352 chr12 91384286 91385109 + 1.74717495966352 NA promoter-TSS (NM_181815) promoter-TSS (NM_181815) -288 NM_181815 75216 Mm.312204 NM_181815 ENSMUSG00000061533 Cep128 4930534B04Rik|5430424K18Rik|AI449708|AI480494|E230024F20 centrosomal protein 128 protein-coding common_peak2_97_631_0.199707799919938_9.40363464813707_1.74639314873935 chr9 108093640 108095554 + 1.74639314873935 NA promoter-TSS (NM_146226) promoter-TSS (NM_146226) -117 NM_146226 235606 Mm.219639 NM_146226 ENSMUSG00000032590 Apeh - acylpeptide hydrolase protein-coding common_peak1_25_190_-0.422007583394817_7.36642503633834_1.74632633270651-2 chr17 33843133 33843578 + 1.74632633270651 NA promoter-TSS (NM_001305169) promoter-TSS (NM_001305169) -71 NM_001305169 54219 Mm.11175 NM_019421 ENSMUSG00000002308 Cd320 425O18-1|8D6|D17Ertd716e|NG29|TCblR|VLDL CD320 antigen protein-coding common_peak1_25_190_-0.422007583394817_7.36642503633834_1.74632633270651 chr12 79296787 79297394 + 1.74632633270651 NA promoter-TSS (NM_001008550) promoter-TSS (NM_001008550) -192 NM_009014 19363 Mm.341756 NM_009014 ENSMUSG00000059060 Rad51b AI553500|R51H2|Rad51l1|mREC2 RAD51 paralog B protein-coding unique_peak2_25_190_-0.422007583394817_7.36642503633834_1.74632633270651 chr13 80940225 80941630 + 1.74632633270651 NA intron (NR_103550, intron 1 of 4) intron (NR_103550, intron 1 of 4) 524 NR_103550 71416 Mm.415500 NR_103550 5430425K12Rik - RIKEN cDNA 5430425K12 gene ncRNA unique_peak2_25_190_-0.422007583394817_7.36642503633834_1.74632633270651-2 chr15 94564863 94566080 + 1.74632633270651 NA intron (NM_029926, intron 10 of 11) B1_Mus2|SINE|Alu 21811 NM_029926 266632 Mm.422858 NM_029926 ENSMUSG00000059883 Irak4 8430405M07Rik|9330209D03Rik|IRAK-4|NY-REN-64 interleukin-1 receptor-associated kinase 4 protein-coding common_peak1_139_1005_0.160255747090719_10.0545424633509_1.74613345332133-2 chr9 56927664 56929043 + 1.74613345332133 NA promoter-TSS (NM_175483) promoter-TSS (NM_175483) 18 NM_175483 235406 Mm.191459 NM_175483 ENSMUSG00000032733 Snx33 E130307J07Rik|Sh3px3 sorting nexin 33 protein-coding common_peak1_139_1005_0.160255747090719_10.0545424633509_1.74613345332133 chr11 74959110 74960870 + 1.74613345332133 NA intron (NM_001002764, intron 8 of 18) intron (NM_001002764, intron 8 of 18) 34118 NM_001002764 103677 Mm.288460 NM_001002764 ENSMUSG00000038290 Smg6 AI317223|AU041178 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_46_361_-0.296714799657188_8.35148848725461_1.74538312230335 chrX 74313054 74313738 + 1.74538312230335 NA intron (NM_138607, intron 1 of 12) CpG 363 NM_138607 108160 Mm.4370 NM_138607 ENSMUSG00000001962 Fam50a D0HXS9928E|XAP-5 family with sequence similarity 50, member A protein-coding common_peak1_179_1676_-0.132263713627003_10.6455351167508_1.7452944363775 chr12 25334526 25336708 + 1.7452944363775 NA Intergenic L2|LINE|L2 206443 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_107_717_0.187592155389256_9.58163611151768_1.74514734355995 chr2 140066021 140067508 + 1.74514734355995 NA promoter-TSS (NM_001159641) promoter-TSS (NM_001159641) 41 NM_001159640 75812 Mm.293449 NM_175225 ENSMUSG00000039033 Tasp1 4930485D02Rik|AW986064 taspase, threonine aspartase 1 protein-coding common_peak1_307_2762_0.097926316333286_11.4809830049791_1.74509792937966 chr8 113634344 113636685 + 1.74509792937966 NA promoter-TSS (NM_173015) promoter-TSS (NM_173015) -72 NM_001048143 270096 Mm.74689 NM_173015 ENSMUSG00000078908 Mon1b 5031407H10|5033413H12Rik MON1 homolog B, secretory traffciking associated protein-coding unique_peak2_21_80_0.519947739809327_6.59982387278929_1.74504486961302 chrX 167232790 167233524 + 1.74504486961302 NA Intergenic Intergenic -23939 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_21_80_0.519947739809327_6.59982387278929_1.74504486961302-4 chr8 35632982 35633505 + 1.74504486961302 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -44223 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_21_80_0.519947739809327_6.59982387278929_1.74504486961302-3 chr5 149247453 149247894 + 1.74504486961302 NA Intergenic Intergenic -17331 NM_001308462 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding common_peak1_21_80_0.519947739809327_6.59982387278929_1.74504486961302 chr12 8584832 8585350 + 1.74504486961302 NA intron (NM_177802, intron 1 of 6) MMVL30-int|LTR|ERV1 13975 NM_177802 328059 Mm.46326 NM_177802 ENSMUSG00000020600 Slc7a15 Arpat solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 protein-coding common_peak1_21_80_0.519947739809327_6.59982387278929_1.74504486961302-2 chr13 49191348 49191944 + 1.74504486961302 NA intron (NM_013610, intron 1 of 3) intron (NM_013610, intron 1 of 3) 4099 NM_013610 18081 Mm.18503 NM_013610 ENSMUSG00000037966 Ninj1 AU024536 ninjurin 1 protein-coding common_peak1_16_122_-0.538978244365068_6.67302538315671_1.74488561656027 chr6 124733331 124733707 + 1.74488561656027 NA promoter-TSS (NM_013545) promoter-TSS (NM_013545) -365 NM_013545 15170 Mm.271799 NM_013545 ENSMUSG00000004266 Ptpn6 70Z-SHP|Hcph|PTPTY-42|Ptp1C|SH-PTP1|SHP-1|hcp|me protein tyrosine phosphatase, non-receptor type 6 protein-coding unique_peak2_16_122_-0.538978244365068_6.67302538315671_1.74488561656027 chr4 19926132 19926987 + 1.74488561656027 NA Intergenic Intergenic -3993 NM_175406 242341 Mm.19298 NM_175406 ENSMUSG00000028238 Atp6v0d2 1620401A02Rik|AI324824|V-ATPase ATPase, H+ transporting, lysosomal V0 subunit D2 protein-coding common_peak2_102_674_0.192804191838546_9.49514578785747_1.74437823176565 chr14 45219620 45221297 + 1.74437823176565 NA intron (NM_027518, intron 1 of 6) CpG 741 NM_027518 70713 Mm.343793 NM_027518 ENSMUSG00000049092 Gpr137c 6330416L11Rik|Gm908|TM7SF1L2 G protein-coupled receptor 137C protein-coding common_peak2_73_600_-0.22482521831342_9.11880857155448_1.74413596588791 chrX 137037335 137038817 + 1.74413596588791 NA intron (NM_001082412, intron 1 of 6) CpG 226 NM_001082412 67062 Mm.276518 NM_001082412 ENSMUSG00000044348 Slc25a53 2310046F18Rik|2810402A17Rik|AI448995|AI841128|Mcart6 solute carrier family 25, member 53 protein-coding common_peak2_55_438_-0.264900068331077_8.64562709536982_1.74408958246913 chr6 87671311 87673052 + 1.74408958246913 NA promoter-TSS (NM_001170489) promoter-TSS (NM_001170489) -13 NM_001170489 72103 Mm.31770 NM_024251 ENSMUSG00000030051 Aplf 2010301N04Rik|AI452191 aprataxin and PNKP like factor protein-coding common_peak2_33_150_0.391743832835449_7.4342766557428_1.74328812345454-3 chr5 142424843 142426229 + 1.74328812345454 NA intron (NM_199068, intron 1 of 8) intron (NM_199068, intron 1 of 8) 24039 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf forkhead box K1 protein-coding common_peak2_33_150_0.391743832835449_7.4342766557428_1.74328812345454-4 chr6 31206996 31208205 + 1.74328812345454 NA intron (NR_110469, intron 1 of 3) intron (NR_110469, intron 1 of 3) 10874 NR_110470 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak2_33_150_0.391743832835449_7.4342766557428_1.74328812345454 chr4 134551484 134552557 + 1.74328812345454 NA exon (NM_029100, exon 1 of 12) exon (NM_029100, exon 1 of 12) 146 NM_029100 74777 Mm.29773 NM_029100 ENSMUSG00000050989 Selenon 1110019I12Rik|AI414492|SelN|Sepn1 selenoprotein N protein-coding common_peak2_33_150_0.391743832835449_7.4342766557428_1.74328812345454-2 chr5 125475823 125476514 + 1.74328812345454 NA intron (NM_030210, intron 1 of 17) intron (NM_030210, intron 1 of 17) 295 NM_030210 78894 Mm.431573 NM_030210 ENSMUSG00000029482 Aacs 2210408B16Rik|SUR5 acetoacetyl-CoA synthetase protein-coding common_peak1_33_150_0.391743832835449_7.4342766557428_1.74328812345454-2 chr6 129672906 129673462 + 1.74328812345454 NA intron (NM_001288664, intron 5 of 5) Lx3_Mus|LINE|L1 5789 NM_001288664 16641 Mm.56899 NM_010652 ENSMUSG00000030167 Klrc1 CD159a|NKG2A|NKG2B killer cell lectin-like receptor subfamily C, member 1 protein-coding common_peak1_33_150_0.391743832835449_7.4342766557428_1.74328812345454 chr17 28467465 28468143 + 1.74328812345454 NA intron (NM_010220, intron 1 of 10) intron (NM_010220, intron 1 of 10) 18345 NM_010220 14229 Mm.276405 NM_010220 ENSMUSG00000024222 Fkbp5 D17Ertd592e|Dit1|FKBP-5|FKBP51 FK506 binding protein 5 protein-coding common_peak2_263_2271_0.107409761715267_11.2034520003623_1.74298844882121 chr1 43097716 43099465 + 1.74298844882121 NA promoter-TSS (NM_133818) promoter-TSS (NM_133818) 32 NM_001013025 73122 Mm.246069 NM_001013025 ENSMUSG00000070939 Tgfbrap1 3110018K12Rik|AU024090|AU042859|AW742551|Trap1 transforming growth factor, beta receptor associated protein 1 protein-coding common_peak2_52_277_0.296800692719605_8.26734141908331_1.74282897841029 chr2 48813442 48814980 + 1.74282897841029 NA 5' UTR (NM_007396, exon 1 of 11) 5' UTR (NM_007396, exon 1 of 11) 102 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding common_peak1_121_841_0.173455339166933_9.80440409264986_1.74241546468877 chr19 21778071 21779108 + 1.74241546468877 NA 5' UTR (NM_031997, exon 1 of 25) 5' UTR (NM_031997, exon 1 of 25) 249 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak2_209_2009_-0.120787244203116_10.9125861639647_1.74233740610201 chr11 63983694 63987140 + 1.74233740610201 NA intron (NM_178379, intron 5 of 6) intron (NM_178379, intron 5 of 6) 21191 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak1_79_656_-0.215390710318841_9.25205420516291_1.74168976225679 chr1 38987282 38988243 + 1.74168976225679 NA promoter-TSS (NM_026850) promoter-TSS (NM_026850) -52 NM_026850 68833 Mm.28121 NM_026850 ENSMUSG00000026078 Pdcl3 1110061A19Rik|C80025|Viaf1 phosducin-like 3 protein-coding common_peak1_79_656_-0.215390710318841_9.25205420516291_1.74168976225679-2 chr11 106415663 106416476 + 1.74168976225679 NA intron (NM_023913, intron 10 of 21) intron (NM_023913, intron 10 of 21) -33428 NM_010494 15896 Mm.394 NM_010494 ENSMUSG00000001029 Icam2 CD102|Icam-2|Ly-60 intercellular adhesion molecule 2 protein-coding common_peak1_39_302_-0.325427444655819_8.08046026114504_1.74096154138384 chr8 3631061 3631692 + 1.74096154138384 NA intron (NM_011503, intron 1 of 18) intron (NM_011503, intron 1 of 18) 216 NM_011503 20911 Mm.7247 NM_011503 ENSMUSG00000004626 Stxbp2 C79054|Munc-18-2|Munc-18b|Munc18b|Sxtbp2|Sxtp2|Unc18-2|Unc18b|muSec1 syntaxin binding protein 2 protein-coding common_peak1_66_536_-0.238234577835689_8.94966098906757_1.74027685807237 chr1 21384289 21385222 + 1.74027685807237 NA intron (NM_001113187, intron 2 of 2) intron (NM_001113187, intron 2 of 2) 1199 NM_001113187 98582 Mm.326336 NM_001113187 ENSMUSG00000085079 Khdc1b AU014713|AU015226|AU024076|AY238603|C85331|C86372|C88118|Khdc1|Khdc1c KH domain containing 1B protein-coding common_peak2_142_1281_-0.151990200036314_10.2481854466006_1.74002690250944 chr19 8517613 8519737 + 1.74002690250944 NA Intergenic IAPLTR3-int|LTR|ERVK -72579 NM_001164634 19879 Mm.285294 NM_031194 ENSMUSG00000063796 Slc22a8 Oat3|Roct solute carrier family 22 (organic anion transporter), member 8 protein-coding common_peak2_185_1451_0.133603294078195_10.5706273850348_1.73997428323797 chr10 75516377 75518695 + 1.73997428323797 NA promoter-TSS (NM_026095) promoter-TSS (NM_026095) -214 NM_175133 68778 Mm.29382 NM_175133 ENSMUSG00000033416 Gucd1 1110038D17Rik guanylyl cyclase domain containing 1 protein-coding common_peak2_132_941_0.164317063049577_9.96174178113757_1.73986905175989 chr1 120072424 120074884 + 1.73986905175989 NA intron (NM_019432, intron 1 of 1) intron (NM_019432, intron 1 of 1) 126 NM_019432 170706 Mm.24750 NM_019432 ENSMUSG00000050777 Tmem37 AI173373|AW540203|Pr|Pr1 transmembrane protein 37 protein-coding common_peak2_80_491_0.223827577653639_9.05442829416606_1.7398485022533 chr2 30807027 30808894 + 1.7398485022533 NA promoter-TSS (NM_170592) promoter-TSS (NM_170592) -17 NM_170592 66617 Mm.33167 NM_170592 ENSMUSG00000026857 Ntmt1 2610205E22Rik|AL033331|AL033332|Mettl11a|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding common_peak1_45_352_-0.298451257991315_8.31429874427552_1.7392707686882 chr6 38875265 38876173 + 1.7392707686882 NA intron (NM_010433, intron 1 of 14) GC_rich|Low_complexity|Low_complexity 471 NM_010433 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding common_peak1_200_1603_0.127219789848086_10.711068321379_1.73842847747551 chr7 80802078 80803937 + 1.73842847747551 NA intron (NM_016721, intron 1 of 37) CpG 324 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_38_293_-0.326728895228503_8.03630789722211_1.73836689129751 chrX 20364620 20365172 + 1.73836689129751 NA intron (NM_133669, intron 1 of 4) intron (NM_133669, intron 1 of 4) 415 NR_110967 19889 Mm.288141 NM_133669 ENSMUSG00000060090 Rp2 AI662636|Rp2h retinitis pigmentosa 2 homolog protein-coding common_peak2_134_959_0.163422558109398_9.98860187466322_1.73835509796356 chr4 11485206 11486817 + 1.73835509796356 NA promoter-TSS (NM_001081183) promoter-TSS (NM_001081183) 53 NM_001081183 66185 Mm.331487 NM_001081183 ENSMUSG00000040720 1110037F02Rik 4930422M05Rik|Kiaa1429|mKIAA1429 RIKEN cDNA 1110037F02 gene protein-coding common_peak1_90_760_-0.199407600783498_9.4720488431118_1.73794047133851 chr10 128922992 128924119 + 1.73794047133851 NA promoter-TSS (NM_015740) promoter-TSS (NM_015740) -31 NM_015740 14533 Mm.30118 NM_015740 ENSMUSG00000090247 Bloc1s1 AI839753|BLOS1|Gcn5l1 biogenesis of lysosomal organelles complex-1, subunit 1 protein-coding common_peak1_32_144_0.397410857645945_7.37861451883791_1.73764019178648-2 chr9 62345095 62345634 + 1.73764019178648 NA intron (NM_009672, intron 1 of 6) intron (NM_009672, intron 1 of 6) 4021 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_32_144_0.397410857645945_7.37861451883791_1.73764019178648 chr14 122533538 122534214 + 1.73764019178648 NA promoter-TSS (NM_144844) promoter-TSS (NM_144844) -452 NM_144844 110821 Mm.23876 NM_144844 ENSMUSG00000041650 Pcca C79630 propionyl-Coenzyme A carboxylase, alpha polypeptide protein-coding unique_peak2_32_144_0.397410857645945_7.37861451883791_1.73764019178648 chr11 21166224 21167263 + 1.73764019178648 NA Intergenic RMER17C|LTR|ERVK -72289 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak2_50_395_-0.281685842952154_8.48851369860353_1.73712140128598 chr2 163697419 163698983 + 1.73712140128598 NA intron (NM_011106, intron 1 of 3) intron (NM_011106, intron 1 of 3) 4164 NM_011106 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak1_50_395_-0.281685842952154_8.48851369860353_1.73712140128598 chr6 129822520 129823537 + 1.73712140128598 NA Intergenic Lx2B2|LINE|L1 -47179 NM_001014997 232415 Mm.290598 NM_001014997 ENSMUSG00000071158 Gm156 Klrh1 predicted gene 156 protein-coding common_peak1_115_1005_-0.172526652920245_9.8881512633454_1.73700366142335 chr4 137365153 137367143 + 1.73700366142335 NA Intergenic L1MA4A|LINE|L1 -8389 NM_001243769 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak1_133_1187_-0.157163109464687_10.1357375660684_1.73691023436166 chr14 103345935 103347467 + 1.73691023436166 NA promoter-TSS (NM_207215) promoter-TSS (NM_207215) 99 NM_207215 105689 Mm.6478 NM_207215 ENSMUSG00000033004 Mycbp2 AU023734|AW107953|AW546647|C130061D10Rik|Pam|Phr1|R75243 MYC binding protein 2 protein-coding common_peak2_87_731_-0.20267747321738_9.41436110167535_1.73580276270044 chr19 3870125 3872690 + 1.73580276270044 NA intron (NR_073190, intron 3 of 12) intron (NR_073190, intron 3 of 12) 19634 NR_073190 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak2_54_429_-0.266901831203544_8.61474193398769_1.73521689987805 chr3 126692803 126694084 + 1.73521689987805 NA intron (NM_001293665, intron 3 of 19) intron (NM_001293665, intron 3 of 19) 96492 NM_023813 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak1_127_895_0.168735274626632_9.89172255937092_1.73398023593706 chr1 134559950 134561507 + 1.73398023593706 NA intron (NM_152895, intron 1 of 26) CpG 550 NM_152895 75605 Mm.28995 NM_152895 ENSMUSG00000042207 Kdm5b 2010009J12Rik|2210016I17Rik|AW556288|D1Ertd202e|Jarid1b|PLU-1|PUT1|Plu1|RBBP2H1A|Rb-Bp2|mKIAA4034 lysine (K)-specific demethylase 5B protein-coding common_peak1_101_665_0.194904721242551_9.47683072769254_1.73390646090404 chr12 100479976 100481593 + 1.73390646090404 NA intron (NM_001033213, intron 3 of 19) intron (NM_001033213, intron 3 of 19) 40038 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak2_17_129_-0.517682451155787_6.76352658745056_1.73347859067709 chr11 69795440 69796142 + 1.73347859067709 NA TTS (NM_010198) TTS (NM_010198) 146 NM_009601 11443 Mm.86425 NM_009601 ENSMUSG00000041189 Chrnb1 Achr-2|Acrb cholinergic receptor, nicotinic, beta polypeptide 1 (muscle) protein-coding unique_peak2_23_91_0.490213512035082_6.76866871207455_1.73347859067709 chr10 121504956 121505805 + 1.73347859067709 NA Intergenic Intergenic -29130 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding common_peak1_23_91_0.490213512035082_6.76866871207455_1.73347859067709 chr11 80075397 80075806 + 1.73347859067709 NA intron (NM_018776, intron 1 of 7) intron (NM_018776, intron 1 of 7) 5390 NM_001277106 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding common_peak1_17_129_-0.517682451155787_6.76352658745056_1.73347859067709 chr13 51777602 51778129 + 1.73347859067709 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 15882 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_23_91_0.490213512035082_6.76866871207455_1.73347859067709-3 chr8 120754898 120755389 + 1.73347859067709 NA exon (NM_001301811, exon 9 of 9) exon (NM_001301811, exon 9 of 9) 16504 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_23_91_0.490213512035082_6.76866871207455_1.73347859067709-2 chr16 78541422 78541854 + 1.73347859067709 NA 3' UTR (NM_001252440, exon 5 of 5) 3' UTR (NM_001252440, exon 5 of 5) -18678 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak2_23_91_0.490213512035082_6.76866871207455_1.73347859067709 chr18 56924875 56925598 + 1.73347859067709 NA intron (NM_177115, intron 1 of 4) CpG 312 NM_177115 320253 Mm.312623 NM_177115 ENSMUSG00000032656 March3 6330411I15Rik|A530081L18Rik|AI843639|MARCH-III membrane-associated ring finger (C3HC4) 3 protein-coding common_peak1_162_1492_-0.140154006213171_10.473921447028_1.73313781364464 chr6 83053635 83055599 + 1.73313781364464 NA promoter-TSS (NM_019752) promoter-TSS (NM_019752) -46 NM_019752 64704 Mm.21880 NM_019752 ENSMUSG00000068329 Htra2 AI481710|Omi|Prss25|mnd2 HtrA serine peptidase 2 protein-coding unique_peak2_31_138_0.403924501588016_7.32090332351752_1.73289127053368 chr4 149692740 149694030 + 1.73289127053368 NA intron (NM_001029837, intron 1 of 23) intron (NM_001029837, intron 1 of 23) 5323 NM_001164050 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak2_205_1654_0.125544693268518_10.7553878483288_1.73287388406086 chr5 122157566 122160280 + 1.73287388406086 NA intron (NM_013636, intron 1 of 6) intron (NM_013636, intron 1 of 6) 644 NM_013636 19047 Mm.280784 NM_013636 ENSMUSG00000004455 Ppp1cc PP-1G|PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform protein-coding common_peak2_81_674_-0.210688115686411_9.29339963409499_1.73282818335013 chr11 75278718 75280500 + 1.73282818335013 NA Intergenic Intergenic 68774 NM_001164223 68275 Mm.102574 NM_026653 ENSMUSG00000000751 Rpa1 5031405K23Rik|70kDa|AA589576|AW557552|RF-A|RP-A|Rpa replication protein A1 protein-coding common_peak2_72_591_-0.227134339243321_9.09588619600729_1.73262751135342-2 chrX 12672839 12674516 + 1.73262751135342 NA promoter-TSS (NM_175141) promoter-TSS (NM_175141) -38 NM_175141 69155 Mm.15974 NM_175141 ENSMUSG00000044148 1810030O07Rik - RIKEN cDNA 1810030O07 gene protein-coding common_peak2_72_591_-0.227134339243321_9.09588619600729_1.73262751135342 chr15 75686838 75690374 + 1.73262751135342 NA Intergenic ORR1D2|LTR|ERVL-MaLR -9816 NM_028404 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding common_peak2_84_703_-0.207789770784805_9.35553673324489_1.73262179248947 chr11 5736260 5739356 + 1.73262179248947 NA intron (NM_001077661, intron 1 of 5) B1_Mus2|SINE|Alu 3368 NM_178623 72046 Mm.271657 NM_178623 ENSMUSG00000049680 Urgcp 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 upregulator of cell proliferation protein-coding common_peak1_70_412_0.243161574427571_8.81157875863323_1.7317045338774 chr5 122145001 122146160 + 1.7317045338774 NA Intergenic Intergenic -7518 NM_183307 330188 Mm.386907 NM_183307 ENSMUSG00000043036 Ccdc63 4921511C16Rik coiled-coil domain containing 63 protein-coding common_peak1_63_358_0.261637851674829_8.61865895966046_1.73156663484058 chr8 45974929 45975902 + 1.73156663484058 NA promoter-TSS (NM_001033148) promoter-TSS (NM_001033148) -113 NM_138668 192169 Mm.210882 NM_138668 ENSMUSG00000031634 Ufsp2 1810047C23Rik UFM1-specific peptidase 2 protein-coding common_peak2_63_358_0.261637851674829_8.61865895966046_1.73156663484058 chr7 98308630 98310022 + 1.73156663484058 NA intron (NM_025408, intron 1 of 10) CpG 201 NM_025408 66190 Mm.334041 NM_025408 ENSMUSG00000030760 Acer3 1110057L18Rik|5430429L08Rik|AV015045|Phca alkaline ceramidase 3 protein-coding common_peak2_120_832_0.1743941592699_9.7893697650005_1.73126466940895 chr5 36829628 36831279 + 1.73126466940895 NA exon (NM_008550, exon 1 of 19) exon (NM_008550, exon 1 of 19) 196 NM_008550 17160 Mm.761 NM_008550 ENSMUSG00000029119 Man2b2 mKIAA0935 mannosidase 2, alpha B2 protein-coding common_peak2_191_1807_-0.126566560764024_10.7568956820332_1.73121895716495 chr4 155199492 155202561 + 1.73121895716495 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 21509 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_22_86_0.495517308244782_6.69070214997112_1.7309208062185-2 chr5 144965934 144966347 + 1.7309208062185 NA promoter-TSS (NM_001038627) promoter-TSS (NM_001038627) -310 NM_001038627 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding common_peak1_22_86_0.495517308244782_6.69070214997112_1.7309208062185 chr1 21309853 21310333 + 1.7309208062185 NA Intergenic Intergenic -11781 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo common_peak1_73_435_0.238211637620839_8.88729014358735_1.73073022612046 chr1 132417135 132418376 + 1.73073022612046 NA exon (NM_172516, exon 1 of 13) exon (NM_172516, exon 1 of 13) 302 NM_172516 213452 Mm.257120 NM_172516 ENSMUSG00000042046 Dstyk A930019K20Rik|C430014H23Rik|C820013G01|Ripk5 dual serine/threonine and tyrosine protein kinase protein-coding common_peak1_40_195_0.346733420950217_7.78807655459032_1.73069598210981 chr2 35681721 35682485 + 1.73069598210981 NA intron (NM_001290641, intron 3 of 15) intron (NM_001290641, intron 3 of 15) -9891 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding unique_peak2_40_195_0.346733420950217_7.78807655459032_1.73069598210981 chr11 52088868 52090257 + 1.73069598210981 NA Intergenic Intergenic -9262 NM_019411 19052 Mm.260288 NM_019411 ENSMUSG00000020349 Ppp2ca PP2A|R75353 protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform protein-coding common_peak1_93_598_0.20333120582359_9.32807779570058_1.72921347000167 chr19 27429284 27430769 + 1.72921347000167 NA promoter-TSS (NR_131940) promoter-TSS (NR_131940) -11 NR_027987 107372 Mm.17942 NM_175354 C030016D13Rik AW413347 RIKEN cDNA C030016D13 gene ncRNA common_peak2_30_132_0.411399769233117_7.26098232011775_1.72915557877216 chr9 56448786 56449822 + 1.72915557877216 NA intron (NM_025812, intron 1 of 9) B1F|SINE|Alu 30458 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding unique_peak2_30_132_0.411399769233117_7.26098232011775_1.72915557877216 chr4 139231777 139232942 + 1.72915557877216 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 38248 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_30_132_0.411399769233117_7.26098232011775_1.72915557877216 chr15 97350762 97351295 + 1.72915557877216 NA intron (NM_172293, intron 3 of 5) intron (NM_172293, intron 3 of 5) -103741 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_15_50_0.623827921153673_5.98433930254833_1.72886723646024-4 chr2 144008797 144009234 + 1.72886723646024 NA intron (NM_024281, intron 1 of 23) intron (NM_024281, intron 1 of 23) 2248 NM_133626 81910 Mm.13705 NM_024281 ENSMUSG00000027422 Rrbp1 1700087N07Rik|5730465C04Rik|ES/130|mKIAA1398|mRRp0|mRRp1.8|mRRp10|mRRp15a|mRRp15b|mRRp16.8|mRRp2|mRRp41|mRRp47|mRRp5.4|p180 ribosome binding protein 1 protein-coding common_peak1_15_50_0.623827921153673_5.98433930254833_1.72886723646024-3 chr2 127309137 127309528 + 1.72886723646024 NA Intergenic Intergenic -26827 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak1_15_50_0.623827921153673_5.98433930254833_1.72886723646024 chr1 55025439 55025839 + 1.72886723646024 NA intron (NM_031179, intron 1 of 24) intron (NM_031179, intron 1 of 24) 1839 NM_031179 81898 Mm.279736 NM_031179 ENSMUSG00000025982 Sf3b1 155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4 splicing factor 3b, subunit 1 protein-coding common_peak1_15_50_0.623827921153673_5.98433930254833_1.72886723646024-2 chr11 5739641 5740049 + 1.72886723646024 NA intron (NM_001077661, intron 1 of 5) intron (NM_001077661, intron 1 of 5) 1331 NM_178623 72046 Mm.271657 NM_178623 ENSMUSG00000049680 Urgcp 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 upregulator of cell proliferation protein-coding unique_peak1_15_50_0.623827921153673_5.98433930254833_1.72886723646024 chr6 54840996 54841396 + 1.72886723646024 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 24280 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding unique_peak2_10_79_-0.688742663379767_5.97755676319748_1.72886723646023 chr1 164953687 164954294 + 1.72886723646023 NA Intergenic Intergenic -18480 NM_008510 16963 Mm.190 NM_008510 ENSMUSG00000026573 Xcl1 AI661682|ATAC|LTN|Lptn|SCM-1|SCM-1a|Scyc1 chemokine (C motif) ligand 1 protein-coding unique_peak2_10_79_-0.688742663379767_5.97755676319748_1.72886723646023-2 chr10 19514525 19515195 + 1.72886723646023 NA Intergenic Intergenic -77098 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding unique_peak2_10_79_-0.688742663379767_5.97755676319748_1.72886723646023-4 chr13 5955843 5956566 + 1.72886723646023 NA Intergenic MTEb|LTR|ERVL-MaLR 94715 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding unique_peak2_10_79_-0.688742663379767_5.97755676319748_1.72886723646023-3 chr11 120713876 120714404 + 1.72886723646023 NA promoter-TSS (NM_016665) promoter-TSS (NM_016665) 187 NM_153545 217366 Mm.347545 NM_153545 ENSMUSG00000025145 Lrrc45 BC023296 leucine rich repeat containing 45 protein-coding unique_peak2_10_79_-0.688742663379767_5.97755676319748_1.72886723646023-5 chr18 4335108 4335859 + 1.72886723646023 NA intron (NM_007746, intron 5 of 7) intron (NM_007746, intron 5 of 7) 17470 NM_007746 26410 Mm.3275 NM_007746 ENSMUSG00000024235 Map3k8 Cot|Cot/Tpl2|Est|Estf|Tpl-2|Tpl2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding common_peak2_79_483_0.225495612728894_9.03161104363904_1.7285725376802 chr14 54602799 54604112 + 1.7285725376802 NA intron (NM_028890, intron 1 of 6) CpG 2453 NM_028890 74359 Mm.79815 NM_028890 ENSMUSG00000022179 4931414P19Rik - RIKEN cDNA 4931414P19 gene protein-coding common_peak1_131_932_0.164811299181832_9.94813892044268_1.72853755004696 chr4 11485248 11486583 + 1.72853755004696 NA promoter-TSS (NM_001081183) promoter-TSS (NM_001081183) -43 NM_001081183 66185 Mm.331487 NM_001081183 ENSMUSG00000040720 1110037F02Rik 4930422M05Rik|Kiaa1429|mKIAA1429 RIKEN cDNA 1110037F02 gene protein-coding common_peak1_51_271_0.294570714576949_8.23474819853881_1.72817344965533 chr11 113751797 113752553 + 1.72817344965533 NA promoter-TSS (NM_001163346) promoter-TSS (NM_001163346) -360 NM_001163346 56699 Mm.293378 NM_020006 ENSMUSG00000041598 Cdc42ep4 1500041M20Rik|Borg4|CEP4 CDC42 effector protein (Rho GTPase binding) 4 protein-coding common_peak2_51_271_0.294570714576949_8.23474819853881_1.72817344965533 chr4 62677274 62679244 + 1.72817344965533 NA intron (NM_001310706, intron 1 of 6) intron (NM_001310706, intron 1 of 6) 4285 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_55_299_0.2843583707084_8.37099787585008_1.72792325180191 chr5 110109659 110110753 + 1.72792325180191 NA 5' UTR (NM_001163996, exon 1 of 5) 5' UTR (NM_001163996, exon 1 of 5) 114 NM_001163996 675812 Mm.442122 NM_001163996 ENSMUSG00000023284 Zfp605 A830023I12Rik zinc finger protein 605 protein-coding common_peak2_393_3774_0.0834579987118502_11.9239899284557_1.72791129836526 chr10 111163444 111166396 + 1.72791129836526 NA 5' UTR (NM_175489, exon 1 of 24) 5' UTR (NM_175489, exon 1 of 24) 118 NM_175489 237542 Mm.220204 NM_175489 ENSMUSG00000020189 Osbpl8 AA536976|AA536995|C730029P18Rik|D330025H14Rik|ORP-8 oxysterol binding protein-like 8 protein-coding unique_peak2_8_65_-0.766321068672141_5.66123358502238_1.72757011346395-3 chr18 65392348 65392970 + 1.72757011346395 NA intron (NM_001037294, intron 1 of 12) intron (NM_001037294, intron 1 of 12) 1229 NM_001037294 225638 Mm.296528 NM_001037294 ENSMUSG00000032845 Alpk2 Gm549|Hak alpha-kinase 2 protein-coding unique_peak2_8_65_-0.766321068672141_5.66123358502238_1.72757011346395-2 chr15 36727551 36728120 + 1.72757011346395 NA Intergenic RMER17C-int|LTR|ERVK 63097 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding unique_peak2_8_65_-0.766321068672141_5.66123358502238_1.72757011346395 chr1 36296770 36297459 + 1.72757011346395 NA Intergenic Intergenic -10619 NM_001290727 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding common_peak1_26_108_0.454023242062669_6.99519594580826_1.72744577118383 chr11 83038736 83039311 + 1.72744577118383 NA intron (NR_073524, intron 1 of 4) intron (NR_073524, intron 1 of 4) 1019 NR_073523 237887 Mm.341645 NM_181542 ENSMUSG00000072621 Slfn10-ps Slfn10|mFLJ00257 schlafen 10, pseudogene pseudo common_peak1_26_108_0.454023242062669_6.99519594580826_1.72744577118383-2 chr11 88954910 88955458 + 1.72744577118383 NA intron (NM_029023, intron 1 of 12) intron (NM_029023, intron 1 of 12) 258 NM_029023 74617 Mm.34126 NM_029023 ENSMUSG00000000278 Scpep1 2410018F01Rik|4833411K15Rik|AI957256|Risc serine carboxypeptidase 1 protein-coding common_peak2_26_108_0.454023242062669_6.99519594580826_1.72744577118383 chr2 153014763 153015451 + 1.72744577118383 NA intron (NM_178939, intron 1 of 4) intron (NM_178939, intron 1 of 4) 276 NM_178939 68559 Mm.12746 NM_178939 ENSMUSG00000027472 Pdrg1 1110004D19Rik|AU020945|AV006589|Pdrg p53 and DNA damage regulated 1 protein-coding common_peak2_183_1719_-0.129895111936881_10.683245293621_1.7273126778146 chr16 32162717 32166096 + 1.7273126778146 NA intron (NM_146069, intron 1 of 3) intron (NM_146069, intron 1 of 3) 1070 NM_146069 224109 Mm.33498 NM_146069 ENSMUSG00000052384 Nrros E430025L02Rik|Lrcc33|Lrrc33 negative regulator of reactive oxygen species protein-coding common_peak1_133_950_0.163854480475516_9.97522877109832_1.7270018516936 chr3 97609325 97610483 + 1.7270018516936 NA intron (NM_026539, intron 1 of 22) CpG 286 NM_026539 68058 Mm.31761 NM_026539 ENSMUSG00000028089 Chd1l 4432404A22Rik|Alc1|Snf2p chromodomain helicase DNA binding protein 1-like protein-coding common_peak1_181_1697_-0.130663389646635_10.6642890487297_1.72660592571342 chr11 87461422 87463027 + 1.72660592571342 NA intron (NM_031386, intron 2 of 30) CpG 34633 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak2_29_126_0.419971745825538_7.19867055968493_1.72656755787615 chr12 33131752 33132514 + 1.72656755787615 NA intron (NR_015602, intron 4 of 5) intron (NR_015602, intron 4 of 5) 15453 NR_015602 320046 Mm.208337 NR_015602 ENSMUSG00000052125 F730043M19Rik - RIKEN cDNA F730043M19 gene ncRNA common_peak1_53_420_-0.268856545040444_8.58324815054617_1.72651732983683 chr8 79711766 79712306 + 1.72651732983683 NA promoter-TSS (NM_015751) promoter-TSS (NM_015751) 216 NM_026904 68999 Mm.257445 NM_026904 ENSMUSG00000036977 Anapc10 1500026N15Rik|A830003M23Rik|APC10 anaphase promoting complex subunit 10 protein-coding unique_peak2_13_100_-0.598259043920224_6.35908196079168_1.7264003708578 chr1 92824509 92825370 + 1.7264003708578 NA Intergenic Intergenic -6747 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding unique_peak2_13_100_-0.598259043920224_6.35908196079168_1.7264003708578-4 chr5 139309992 139310606 + 1.7264003708578 NA intron (NM_172723, intron 1 of 10) intron (NM_172723, intron 1 of 10) 15165 NM_172723 231821 Mm.297819 NM_172723 ENSMUSG00000056413 Adap1 4930431P11Rik|Centa1|GC1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding common_peak1_13_100_-0.598259043920224_6.35908196079168_1.7264003708578 chr1 144002955 144003399 + 1.7264003708578 NA intron (NM_009061, intron 1 of 4) intron (NM_009061, intron 1 of 4) 972 NM_009061 19735 Mm.28262 NM_009061 ENSMUSG00000026360 Rgs2 GOS8 regulator of G-protein signaling 2 protein-coding common_peak1_13_100_-0.598259043920224_6.35908196079168_1.7264003708578-2 chr10 68198441 68198850 + 1.7264003708578 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 80081 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding unique_peak2_13_100_-0.598259043920224_6.35908196079168_1.7264003708578-2 chr14 27233910 27234730 + 1.7264003708578 NA intron (NM_001289686, intron 3 of 12) intron (NM_001289686, intron 3 of 12) -3690 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_13_100_-0.598259043920224_6.35908196079168_1.7264003708578-5 chr9 106477251 106477887 + 1.7264003708578 NA promoter-TSS (NM_145619) promoter-TSS (NM_145619) 260 NM_145620 27966 Mm.239997 NM_145620 ENSMUSG00000041506 Rrp9 55kDa|D19435|D9Wsu10e|Rnu3ip2|U3-55k RRP9, small subunit (SSU) processome component, homolog (yeast) protein-coding unique_peak2_13_100_-0.598259043920224_6.35908196079168_1.7264003708578-3 chr5 118360258 118360838 + 1.7264003708578 NA Intergenic Intergenic 115321 NM_001081236 76792 Mm.103428 NM_001081236 ENSMUSG00000032840 2410131K14Rik - RIKEN cDNA 2410131K14 gene protein-coding common_peak2_172_1322_0.139613185213872_10.4394039388856_1.72566708822615 chr1 180371188 180374555 + 1.72566708822615 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -42322 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_68_554_-0.233748640990674_8.99946964074213_1.72564640577975 chr6 39573345 39574512 + 1.72564640577975 NA promoter-TSS (NM_178873) promoter-TSS (NM_178873) 52 NM_178873 57869 Mm.247957 NM_178873 ENSMUSG00000046947 Adck2 AA408112|BB006057 aarF domain containing kinase 2 protein-coding common_peak2_68_554_-0.233748640990674_8.99946964074213_1.72564640577975 chr1 192603907 192605891 + 1.72564640577975 NA intron (NM_144881, intron 9 of 11) intron (NM_144881, intron 9 of 11) 166320 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak2_27_114_0.441074699073551_7.06602740048115_1.72550289766615-2 chr15 12564995 12565979 + 1.72550289766615 NA intron (NM_001081064, intron 1 of 23) intron (NM_001081064, intron 1 of 23) 27069 NM_001081064 68070 Mm.423205 NM_001081064 ENSMUSG00000022197 Pdzd2 4930537L06Rik|A930022H17Rik|Gm21706|Gm82|Pdzk3|mKIAA0300 PDZ domain containing 2 protein-coding common_peak1_27_114_0.441074699073551_7.06602740048115_1.72550289766615 chr7 75700287 75700823 + 1.72550289766615 NA intron (NM_029332, intron 16 of 36) intron (NM_029332, intron 16 of 36) -147783 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_27_114_0.441074699073551_7.06602740048115_1.72550289766615 chr12 98900851 98901582 + 1.72550289766615 NA 5' UTR (NM_001081191, exon 1 of 44) 5' UTR (NM_001081191, exon 1 of 44) 268 NM_001081191 319670 Mm.390484 NM_001081191 ENSMUSG00000051166 Eml5 BC027154|C130068M19Rik echinoderm microtubule associated protein like 5 protein-coding common_peak2_27_114_0.441074699073551_7.06602740048115_1.72550289766615-3 chr16 29864639 29865750 + 1.72550289766615 NA Intergenic Intergenic 113930 NR_037689 328657 Mm.425982 NM_001033403 Gm1968 - predicted gene 1968 ncRNA common_peak1_132_1177_-0.158223511168099_10.1230120682464_1.7254860784066 chr11 115133262 115135203 + 1.7254860784066 NA promoter-TSS (NM_001169153) promoter-TSS (NM_001169153) -240 NM_145634 246746 Mm.277387 NM_145634 ENSMUSG00000047798 Cd300lf CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3 CD300 molecule like family member F protein-coding common_peak2_28_120_0.429800077237974_7.13376327589358_1.7252865587566 chr11 98930703 98931634 + 1.7252865587566 NA Intergenic Intergenic -6528 NM_009024 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak2_28_120_0.429800077237974_7.13376327589358_1.7252865587566-3 chrX 102643856 102644964 + 1.7252865587566 NA promoter-TSS (NM_008832) promoter-TSS (NM_008832) -164 NM_173021 18679 Mm.212889 NM_008832 ENSMUSG00000034055 Phka1 5330411D17|9830108K24Rik|Phka phosphorylase kinase alpha 1 protein-coding unique_peak2_28_120_0.429800077237974_7.13376327589358_1.7252865587566 chr14 60268983 60270027 + 1.7252865587566 NA intron (NM_144843, intron 1 of 13) intron (NM_144843, intron 1 of 13) 4300 NM_144843 219135 Mm.247007 NM_144843 ENSMUSG00000021987 Mtmr6 4022440C11Rik|AI428804|AU041072 myotubularin related protein 6 protein-coding common_peak2_28_120_0.429800077237974_7.13376327589358_1.7252865587566-2 chr2 69205556 69206241 + 1.7252865587566 NA 5' UTR (NM_001199123, exon 1 of 7) 5' UTR (NM_001199123, exon 1 of 7) 315 NM_025565 66442 Mm.272969 NM_025565 ENSMUSG00000005233 Spc25 2600017H08Rik|2610205L13Rik|Spbc25 SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) protein-coding common_peak1_28_120_0.429800077237974_7.13376327589358_1.7252865587566 chr7 44402003 44402597 + 1.7252865587566 NA Intergenic B3A|SINE|B2 18174 NM_016663 20981 Mm.4824 NM_016663 ENSMUSG00000030731 Syt3 AI385753|sytIII synaptotagmin III protein-coding common_peak2_66_381_0.253114872113976_8.70398626409274_1.72525964313172 chr1 44951020 44951377 + 1.72525964313172 NA Intergenic (CTATT)n|Simple_repeat|Simple_repeat -206249 NR_040602 75066 Mm.416932 NR_040602 ENSMUSG00000101701 4930521E06Rik - RIKEN cDNA 4930521E06 gene ncRNA common_peak1_18_136_-0.497667879563636_6.84919814317871_1.72523914848459-3 chr4 133729062 133729538 + 1.72523914848459 NA intron (NM_001080819, intron 1 of 19) intron (NM_001080819, intron 1 of 19) -12192 NR_106086 102465707 NR_106086 ENSMUSG00000104566 Mir7227 mmu-mir-7227 microRNA 7227 ncRNA common_peak1_24_97_0.471305348021176_6.8503625181258_1.72523914848459-2 chr5 113872439 113872983 + 1.72523914848459 NA intron (NM_011779, intron 2 of 10) intron (NM_011779, intron 2 of 10) 35995 NM_011779 23790 Mm.260158 NM_011779 ENSMUSG00000004530 Coro1c AL022675|AW455561|AW548837 coronin, actin binding protein 1C protein-coding common_peak1_24_97_0.471305348021176_6.8503625181258_1.72523914848459 chr12 112593778 112594395 + 1.72523914848459 NA intron (NM_198411, intron 1 of 22) intron (NM_198411, intron 1 of 22) 5302 NM_198411 70435 Mm.250193 NM_198411 ENSMUSG00000037679 Inf2 2610204M08Rik|AA589465|AW125550|EG629699 inverted formin, FH2 and WH2 domain containing protein-coding unique_peak2_18_136_-0.497667879563636_6.84919814317871_1.72523914848459 chr9 20580934 20581960 + 1.72523914848459 NA 5' UTR (NM_172919, exon 1 of 6) 5' UTR (NM_172919, exon 1 of 6) 119 NM_172919 244721 Mm.86627 NM_172919 ENSMUSG00000058192 Zfp846 2210010B09Rik|9130221F13|Znf846 zinc finger protein 846 protein-coding common_peak1_18_136_-0.497667879563636_6.84919814317871_1.72523914848459 chr11 20542270 20542649 + 1.72523914848459 NA promoter-TSS (NM_021372) promoter-TSS (NM_021372) -794 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding unique_peak2_24_97_0.471305348021176_6.8503625181258_1.72523914848459 chr12 99902523 99903277 + 1.72523914848459 NA intron (NM_028354, intron 6 of 15) intron (NM_028354, intron 6 of 15) 18385 NM_028354 104884 Mm.312323 NM_028354 ENSMUSG00000021177 Tdp1 2810481F14Rik|4921509N21Rik|AI838772|AW493413|E430034L06Rik|MLZ-501|SCAN1 tyrosyl-DNA phosphodiesterase 1 protein-coding common_peak1_18_136_-0.497667879563636_6.84919814317871_1.72523914848459-2 chr2 144224651 144225102 + 1.72523914848459 NA Intergenic L1MCa|LINE|L1 -35586 NM_001033778 common_peak1_59_329_0.268946529538244_8.50079547901494_1.72523325972714 chr2 29677846 29678772 + 1.72523325972714 NA intron (NM_054050, intron 1 of 23) B2_Mm2|SINE|B2 58589 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_154_1148_0.148624708966514_10.2404754371294_1.72505406946422 chr9 13748408 13750148 + 1.72505406946422 NA promoter-TSS (NM_023858) promoter-TSS (NM_023858) 97 NR_024025 77116 Mm.210405 NM_023858 ENSMUSG00000031918 Mtmr2 6030445P13Rik myotubularin related protein 2 protein-coding common_peak1_36_277_-0.339157421512096_7.94936236196746_1.7236984519341 chr2 29787275 29788054 + 1.7236984519341 NA promoter-TSS (NM_001290496) promoter-TSS (NM_001290496) 7 NM_001290496 227682 Mm.245739 NM_145520 ENSMUSG00000039826 Trub2 G430055L02Rik TruB pseudouridine (psi) synthase family member 2 protein-coding common_peak2_159_1459_-0.140781492577535_10.4413619074786_1.72361785070127 chr11 63922455 63925925 + 1.72361785070127 NA Intergenic Intergenic -1906 NM_018805 54710 Mm.274426 NM_018805 ENSMUSG00000070407 Hs3st3b1 3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 protein-coding common_peak2_43_335_-0.305907368898453_8.23936373832953_1.72345413566445 chr11 49854581 49855852 + 1.72345413566445 NA intron (NM_001163671, intron 2 of 11) B1_Mur3|SINE|Alu 8465 NM_016961 26420 Mm.68933 NM_016961 ENSMUSG00000020366 Mapk9 AI851083|JNK2|Prkm9|p54aSAPK mitogen-activated protein kinase 9 protein-coding common_peak2_167_1545_-0.137013026567281_10.5258180906412_1.72327825764076 chr17 24140119 24142455 + 1.72327825764076 NA intron (NM_001286662, intron 1 of 13) CpG 307 NM_011062 18607 Mm.10504 NM_011062 ENSMUSG00000024122 Pdpk1 Pdk1 3-phosphoinositide dependent protein kinase 1 protein-coding common_peak2_167_1545_-0.137013026567281_10.5258180906412_1.72327825764076-2 chr9 110674546 110678698 + 1.72327825764076 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 20119 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_234_2292_-0.111783965276457_11.1071286569426_1.72312053067815 chr6 128792562 128795970 + 1.72312053067815 NA Intergenic L1_Mur3|LINE|L1 -5625 NM_001159904 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak2_35_268_-0.3401646894976_7.90138001780782_1.7229612907037 chr2 78859477 78860923 + 1.7229612907037 NA Intergenic Intergenic -8847 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_83_693_-0.20809258640705_9.33474555937473_1.72258006999382 chr18 62977220 62978830 + 1.72258006999382 NA intron (NM_028017, intron 1 of 11) CpG 109 NM_028017 108123 Mm.292687 NM_028017 ENSMUSG00000024581 Napg 2400003O04Rik|SNARE N-ethylmaleimide sensitive fusion protein attachment protein gamma protein-coding common_peak2_126_887_0.16779482782394_9.87831328026208_1.72119950649153 chr11 58937902 58939472 + 1.72119950649153 NA exon (NM_022423, exon 1 of 4) exon (NM_022423, exon 1 of 4) 219 NM_022423 108660 Mm.249986 NM_022423 ENSMUSG00000020496 Rnf187 2410016F01Rik|AB030190|RACO-1 ring finger protein 187 protein-coding common_peak2_80_665_-0.213036284078383_9.27286022503207_1.72073984093098 chr16 17508042 17509611 + 1.72073984093098 NA promoter-TSS (NM_025808) promoter-TSS (NM_025808) -145 NM_025808 66863 Mm.161726 NM_025808 ENSMUSG00000022761 Lztr1 1200003E21Rik|AI591627|AW550890 leucine-zipper-like transcriptional regulator, 1 protein-coding common_peak1_77_637_-0.217856852970652_9.20848418727954_1.72019916636658-2 chrX 42148125 42149053 + 1.72019916636658 NA promoter-TSS (NM_001077712) promoter-TSS (NM_001077712) -823 NM_001077712 20843 Mm.290422 NM_021465 ENSMUSG00000025862 Stag2 9230105L23Rik|B230112I07Rik|SA-2|SAP2 stromal antigen 2 protein-coding common_peak1_77_637_-0.217856852970652_9.20848418727954_1.72019916636658 chr13 113580118 113581322 + 1.72019916636658 NA Intergenic ID_B1|SINE|B4 37844 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak1_39_189_0.347890930486185_7.74380107357404_1.71985424357223 chr2 19300922 19301569 + 1.71985424357223 NA intron (NM_001271565, intron 17 of 17) intron (NM_001271565, intron 17 of 17) -43072 NR_126563 108871 Mm.107666 NR_126563 4930447M23Rik - RIKEN cDNA 4930447M23 gene ncRNA common_peak2_264_2283_0.106500416958591_11.2105971438421_1.71981913180817 chr4 95192443 95198152 + 1.71981913180817 NA Intergenic MTD|LTR|ERVL-MaLR -143075 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_45_229_0.31958306433549_8.00528158311212_1.71969153712731 chr19 21942142 21943117 + 1.71969153712731 NA Intergenic Intergenic 164289 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_19_143_-0.478790773811536_6.93052961453654_1.71966008370873-2 chr13 101736958 101737430 + 1.71966008370873 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) 31023 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_25_103_0.45498152649984_6.92793048139101_1.71966008370873 chr16 33751151 33751535 + 1.71966008370873 NA intron (NM_175256, intron 12 of 14) intron (NM_175256, intron 12 of 14) -42694 NM_010739 17063 Mm.3177 NM_010739 ENSMUSG00000022824 Muc13 114/A10|14/A10|AI159736|Lrrp|Ly64|NJ-1 mucin 13, epithelial transmembrane protein-coding common_peak1_19_143_-0.478790773811536_6.93052961453654_1.71966008370873 chr1 170853752 170854236 + 1.71966008370873 NA intron (NM_001081304, intron 2 of 15) RMER17A|LTR|ERVK 13777 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding common_peak1_19_143_-0.478790773811536_6.93052961453654_1.71966008370873-3 chr17 56997328 56997717 + 1.71966008370873 NA exon (NM_027372, exon 1 of 3) exon (NM_027372, exon 1 of 3) 183 NM_027372 66400 Mm.196150 NM_025538 ENSMUSG00000002661 Alkbh7 2310045B01Rik|2510008E23Rik|Abh7|Spata11 alkB homolog 7 protein-coding unique_peak2_25_103_0.45498152649984_6.92793048139101_1.71966008370873 chr6 128829082 128829753 + 1.71966008370873 NA Intergenic Intergenic -3102 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak1_25_103_0.45498152649984_6.92793048139101_1.71966008370873-2 chr5 3419917 3420449 + 1.71966008370873 NA intron (NM_009873, intron 3 of 7) intron (NM_009873, intron 3 of 7) 76290 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding unique_peak2_19_143_-0.478790773811536_6.93052961453654_1.71966008370873 chr14 78458269 78459260 + 1.71966008370873 NA Intergenic Intergenic 78096 NM_001164503 219181 Mm.89413 NM_001164503 ENSMUSG00000022016 Akap11 6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629 A kinase (PRKA) anchor protein 11 protein-coding common_peak2_19_143_-0.478790773811536_6.93052961453654_1.71966008370873 chr7 47113472 47114437 + 1.71966008370873 NA intron (NM_013643, intron 1 of 13) intron (NM_013643, intron 1 of 13) 18644 NM_001163565 19259 Mm.4654 NM_013643 ENSMUSG00000030854 Ptpn5 Step protein tyrosine phosphatase, non-receptor type 5 protein-coding common_peak2_62_351_0.262177541314486_8.59052038929454_1.71912003038667 chr11 32266941 32267886 + 1.71912003038667 NA intron (NR_104306, intron 1 of 13) CpG 294 NM_181569 17168 Mm.263161 NM_181569 ENSMUSG00000020289 Nprl3 Aag|CGTHBA|HS-26|HS-40|Mare|Phg|Prox1|m(alpha)RE nitrogen permease regulator-like 3 protein-coding common_peak2_84_524_0.215468235299006_9.14390773020299_1.71863494714865 chr13 64161209 64162725 + 1.71863494714865 NA 5' UTR (NM_019986, exon 1 of 8) 5' UTR (NM_019986, exon 1 of 8) 101 NM_019986 56541 Mm.40989 NM_019986 ENSMUSG00000021476 Habp4 4933413D03Rik|4933428J01Rik hyaluronic acid binding protein 4 protein-coding common_peak2_84_524_0.215468235299006_9.14390773020299_1.71863494714865-2 chr18 75261572 75263437 + 1.71863494714865 NA intron (NM_027727, intron 16 of 16) intron (NM_027727, intron 16 of 16) 34813 NR_045394 100503117 Mm.250517 NR_045393 ENSMUSG00000102047 2010010A06Rik 5033420E22Rik RIKEN cDNA 2010010A06 gene ncRNA common_peak1_50_264_0.297822227676894_8.19875966328901_1.71841488433154 chr6 54681717 54682362 + 1.71841488433154 NA intron (NM_001289740, intron 1 of 2) CpG 415 NM_001289740 68235 Mm.233860 NM_026629 ENSMUSG00000038065 Mturn 2410066E13Rik|AI448550|B230212L03Rik maturin, neural progenitor differentiation regulator homolog (Xenopus) protein-coding common_peak1_50_264_0.297822227676894_8.19875966328901_1.71841488433154-2 chr8 33653245 33654268 + 1.71841488433154 NA exon (NM_010344, exon 1 of 13) exon (NM_010344, exon 1 of 13) 518 NM_010344 14782 Mm.283573 NM_010344 ENSMUSG00000031584 Gsr AI325518|D8Ertd238e|Gr-1|Gr1 glutathione reductase protein-coding common_peak2_42_326_-0.307419655244132_8.19943699787602_1.71841488433144 chr2 122233961 122235316 + 1.71841488433144 NA promoter-TSS (NM_146126) promoter-TSS (NM_146126) -201 NM_146126 20322 Mm.371580 NM_146126 ENSMUSG00000027227 Sord Sdh-1|Sdh1|Sodh-1 sorbitol dehydrogenase protein-coding common_peak1_42_326_-0.307419655244132_8.19943699787602_1.71841488433144-2 chr17 46772349 46773314 + 1.71841488433144 NA exon (NM_025966, exon 1 of 1) exon (NM_025966, exon 1 of 1) 196 NM_025966 67101 Mm.358702 NM_025966 ENSMUSG00000062619 2310039H08Rik - RIKEN cDNA 2310039H08 gene protein-coding common_peak1_42_326_-0.307419655244132_8.19943699787602_1.71841488433144 chr1 90603437 90604173 + 1.71841488433144 NA intron (NM_133805, intron 1 of 7) B1F1|SINE|Alu 380 NM_133805 108679 Mm.119177 NM_133805 ENSMUSG00000034432 Cops8 9430009J09Rik|AA408242|Csn8|Sgn8 COP9 signalosome subunit 8 protein-coding common_peak2_52_411_-0.270758761740106_8.55112114631316_1.71800263756899 chr4 11146445 11147779 + 1.71800263756899 NA Intergenic Intergenic -9329 NM_001199105 60599 Mm.393018 NM_021897 ENSMUSG00000028211 Trp53inp1 2700057G22Rik|SIP|SIP18|SIP27|Stinp|Teap transformation related protein 53 inducible nuclear protein 1 protein-coding common_peak1_52_411_-0.270758761740106_8.55112114631316_1.71800263756899 chr15 10486069 10486843 + 1.71800263756899 NA promoter-TSS (NM_026396) promoter-TSS (NM_026396) 418 NM_001289447 19355 Mm.38376 NM_011232 ENSMUSG00000022248 Rad1 mRAD1 RAD1 checkpoint DNA exonuclease protein-coding common_peak1_52_411_-0.270758761740106_8.55112114631316_1.71800263756899-2 chr16 11424854 11426000 + 1.71800263756899 NA intron (NM_001290148, intron 4 of 13) intron (NM_001290148, intron 4 of 13) 19779 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak2_143_1044_0.15523506846349_10.1069047612_1.71790563642475 chr8 124020176 124022065 + 1.71790563642475 NA intron (NM_133966, intron 1 of 4) CpG 189 NM_133966 102162 Mm.291777 NM_133966 ENSMUSG00000038697 Taf5l 1110005N04Rik|AI849020 TATA-box binding protein associated factor 5 like protein-coding common_peak2_72_428_0.237485188886083_8.86357643194259_1.71715820549089 chr2 38536625 38537955 + 1.71715820549089 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 25414 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak1_72_428_0.237485188886083_8.86357643194259_1.71715820549089 chr16 20140886 20141691 + 1.71715820549089 NA intron (NM_001033237, intron 1 of 29) CpG 225 NM_001145930 208146 Mm.390895 NM_001033237 ENSMUSG00000041215 Yeats2 BC042768|mKIAA1197 YEATS domain containing 2 protein-coding common_peak1_54_292_0.286534163963667_8.33802393640408_1.71703473313903 chr12 80815878 80817074 + 1.71703473313903 NA intron (NM_178682, intron 1 of 5) intron (NM_178682, intron 1 of 5) 25944 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding unique_peak2_34_260_-0.346460282046351_7.85467585554671_1.71696687442915 chr11 60454074 60455384 + 1.71696687442915 NA exon (NM_021354, exon 1 of 13) exon (NM_021354, exon 1 of 13) 112 NM_021354 13495 Mm.41803 NM_021354 ENSMUSG00000020537 Drg2 AI255295|AI461605 developmentally regulated GTP binding protein 2 protein-coding unique_peak1_12_36_0.719355567825627_5.56913114954176_1.71609131452354 chr11 118223702 118224066 + 1.71609131452354 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -11142 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak1_12_36_0.719355567825627_5.56913114954176_1.71609131452354-2 chr5 3151706 3152117 + 1.71609131452354 NA Intergenic Intergenic -191982 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak2_207_1676_0.123591204635654_10.7734625758822_1.71487775297665 chr7 80801571 80804090 + 1.71487775297665 NA intron (NM_016721, intron 1 of 37) intron (NM_016721, intron 1 of 37) 501 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_165_1254_0.14264653151657_10.3647949145964_1.71368468619706 chrX 135007730 135009998 + 1.71368468619706 NA intron (NM_175446, intron 1 of 6) CpG 345 NM_175446 215693 Mm.336238 NM_175446 ENSMUSG00000052676 Zmat1 A230096A06|AW990744|B930008K04Rik zinc finger, matrin type 1 protein-coding common_peak2_58_322_0.270136050347901_8.47045837986787_1.71341886536932 chr8 95852482 95853583 + 1.71341886536932 NA intron (NM_172758, intron 1 of 11) intron (NM_172758, intron 1 of 11) 459 NM_172758 234595 Mm.29267 NM_172758 ENSMUSG00000036534 Slc38a7 D430050E18 solute carrier family 38, member 7 protein-coding common_peak1_58_322_0.270136050347901_8.47045837986787_1.71341886536932-2 chr17 78835525 78836279 + 1.71341886536932 NA promoter-TSS (NM_001081179) promoter-TSS (NM_001081179) 386 NM_181649 53951 Mm.220253 NM_181649 ENSMUSG00000050668 Gpatch11 2310002B06Rik|C80922|Ccdc75|L26697 G patch domain containing 11 protein-coding common_peak1_58_322_0.270136050347901_8.47045837986787_1.71341886536932 chr11 118148557 118149691 + 1.71341886536932 NA Intergenic Intergenic -19905 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak1_65_374_0.253185473463994_8.67733952211524_1.71236650368705 chr11 87662567 87663503 + 1.71236650368705 NA promoter-TSS (NM_172448) promoter-TSS (NM_172448) -52 NM_172448 207742 Mm.440230 NM_172448 ENSMUSG00000034177 Rnf43 4732452J19Rik ring finger protein 43 protein-coding common_peak1_33_252_-0.352845002533783_7.80657107342742_1.71154079428308 chr13 55369703 55370301 + 1.71154079428308 NA intron (NM_016758, intron 1 of 14) intron (NM_016758, intron 1 of 14) 270 NM_016758 51791 Mm.1426 NM_016758 ENSMUSG00000052087 Rgs14 RPIP1 regulator of G-protein signaling 14 protein-coding common_peak2_63_508_-0.242043960577815_8.87049986578679_1.71110526836924 chr19 44562192 44563683 + 1.71110526836924 NA promoter-TSS (NM_176958) promoter-TSS (NM_176958) 83 NM_176958 319594 Mm.145278 NM_176958 ENSMUSG00000036450 Hif1an 2310046M24Rik|A830014H24Rik|FIH|FIH1 hypoxia-inducible factor 1, alpha subunit inhibitor protein-coding common_peak2_63_508_-0.242043960577815_8.87049986578679_1.71110526836924-2 chr5 72724719 72726919 + 1.71110526836924 NA intron (NM_001289494, intron 4 of 13) intron (NM_001289494, intron 4 of 13) 10783 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak2_479_4842_0.0734203897415036_12.2783954824724_1.71087071231292 chr7 64045206 64052058 + 1.71087071231292 NA Intergenic Intergenic -105203 NM_001039104 17364 Mm.38875 NM_018752 ENSMUSG00000030523 Trpm1 4732499L03Rik|AI606771|Ltrpc1|Mlsn1 transient receptor potential cation channel, subfamily M, member 1 protein-coding common_peak2_86_540_0.213313046839037_9.18614130724633_1.71072433584534 chr6 47676273 47677957 + 1.71072433584534 NA promoter-TSS (NR_002841).7 promoter-TSS (NR_002841).7 -378 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_229_2234_-0.112880413912496_11.0696189091144_1.70943316350707 chr11 69670910 69672444 + 1.70943316350707 NA intron (NM_144958, intron 1 of 10) CpG 746 NM_144958 13681 Mm.26680 NM_144958 ENSMUSG00000059796 Eif4a1 BM-010|Ddx2a|Eif4 eukaryotic translation initiation factor 4A1 protein-coding common_peak2_184_1442_0.133033653598533_10.5613724112905_1.70896901875516 chr5 139302320 139305399 + 1.70896901875516 NA intron (NM_172723, intron 2 of 10) intron (NM_172723, intron 2 of 10) 21605 NM_172723 231821 Mm.297819 NM_172723 ENSMUSG00000056413 Adap1 4930431P11Rik|Centa1|GC1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding unique_peak2_41_318_-0.313325658780014_8.16074978437486_1.70890365710781 chrX 7864223 7866316 + 1.70890365710781 NA intron (NM_001290536, intron 2 of 8) intron (NM_001290536, intron 2 of 8) -13037 NM_138606 18715 Mm.347478 NM_138606 ENSMUSG00000031155 Pim2 DXCch3|Pim-2 proviral integration site 2 protein-coding common_peak1_199_1594_0.126511417043222_10.7025964171738_1.70848287179086 chr5 118559651 118561844 + 1.70848287179086 NA promoter-TSS (NM_172424) promoter-TSS (NM_172424) 28 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak2_68_397_0.245970699703145_8.75960997039522_1.70836503401877 chr7 75713557 75716280 + 1.70836503401877 NA intron (NM_029332, intron 17 of 36) intron (NM_029332, intron 17 of 36) -133420 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_249_2120_0.110204184670506_11.1056309978658_1.70802975388418 chr5 92082514 92084613 + 1.70802975388418 NA promoter-TSS (NM_001080797) promoter-TSS (NM_001080797) 35 NM_001080794 23881 Mm.290530 NM_011816 ENSMUSG00000029405 G3bp2 AA409541|E430034L04Rik|G3BP|mKIAA0660 GTPase activating protein (SH3 domain) binding protein 2 protein-coding unique_peak2_11_85_-0.639101597796358_6.10671395580392_1.70786100156634-2 chr15 64067826 64068490 + 1.70786100156634 NA Intergenic Intergenic -7710 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding unique_peak2_11_85_-0.639101597796358_6.10671395580392_1.70786100156634 chr11 78115150 78115952 + 1.70786100156634 NA intron (NM_145430, intron 1 of 2) intron (NM_145430, intron 1 of 2) 20878 NM_145430 216971 Mm.119387 NM_145430 ENSMUSG00000037750 Fam222b 9630020I17Rik family with sequence similarity 222, member B protein-coding unique_peak2_11_85_-0.639101597796358_6.10671395580392_1.70786100156634-5 chr5 119359540 119360323 + 1.70786100156634 NA Intergenic ID4|SINE|ID -159913 NR_046033 665194 Mm.491047 NR_046033 ENSMUSG00000107334 Gm7538 EG665194 predicted gene 7538 ncRNA common_peak1_16_55_0.596181338916568_6.10544559151589_1.70786100156634-2 chr5 8838740 8839256 + 1.70786100156634 NA intron (NM_011075, intron 21 of 27) intron (NM_011075, intron 21 of 27) 40851 NM_011075 18669 Mm.146649 NM_011075 ENSMUSG00000028970 Abcb1b Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr ATP-binding cassette, sub-family B (MDR/TAP), member 1B protein-coding unique_peak2_11_85_-0.639101597796358_6.10671395580392_1.70786100156634-3 chr17 13173514 13174247 + 1.70786100156634 NA Intergenic Intergenic -31162 NR_033458 100038394 Mm.401677 NR_033458 Gm10512 ENSMUSG00000073459 predicted gene 10512 ncRNA common_peak1_16_55_0.596181338916568_6.10544559151589_1.70786100156634 chr4 134042683 134043132 + 1.70786100156634 NA Intergenic Intergenic -24091 NM_145833 83557 Mm.302567 NM_145833 ENSMUSG00000050966 Lin28a AL024421|ENSMUSG00000070700|Gm10299|Lin-28|Lin28|Tex17|lin-28A lin-28 homolog A (C. elegans) protein-coding unique_peak2_11_85_-0.639101597796358_6.10671395580392_1.70786100156634-6 chrX 47912262 47912862 + 1.70786100156634 NA 5' UTR (NM_177215, exon 1 of 24) 5' UTR (NM_177215, exon 1 of 24) 106 NM_177215 320634 Mm.210343 NM_177215 ENSMUSG00000001173 Ocrl 9530014D17Rik|BB143339|OCRL1 oculocerebrorenal syndrome of Lowe protein-coding unique_peak2_16_55_0.596181338916568_6.10544559151589_1.70786100156634 chr11 115693048 115693521 + 1.70786100156634 NA intron (NM_001313936, intron 2 of 5) B1F|SINE|Alu 6250 NM_001313937 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding unique_peak2_11_85_-0.639101597796358_6.10671395580392_1.70786100156634-4 chr19 4268675 4269374 + 1.70786100156634 NA exon (NM_198113, exon 1 of 14) exon (NM_198113, exon 1 of 14) 148 NM_198113 245857 Mm.248388 NM_198113 ENSMUSG00000034616 Ssh3 BC028922|SSH-3|mSSH-3L slingshot homolog 3 (Drosophila) protein-coding unique_peak2_16_55_0.596181338916568_6.10544559151589_1.70786100156634-2 chr3 146404665 146405145 + 1.70786100156634 NA 5' UTR (NM_001253768, exon 1 of 15) 5' UTR (NM_001253768, exon 1 of 15) 263 NM_138744 99167 Mm.200783 NM_138744 ENSMUSG00000036825 Ssx2ip AU014939|AU042321|Adip synovial sarcoma, X 2 interacting protein protein-coding unique_peak2_11_85_-0.639101597796358_6.10671395580392_1.70786100156634-7 chrX 96128136 96128907 + 1.70786100156634 NA intron (NM_010833, intron 1 of 12) MLTR11A|LTR|ERVK 32476 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_105_904_-0.179419905341099_9.73206402930002_1.70770495272188 chr4 63397846 63399427 + 1.70770495272188 NA promoter-TSS (NM_001305432) promoter-TSS (NM_001305432) -396 NM_001305432 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak1_219_1801_0.11913234494509_10.8749494682861_1.70763297857488 chr11 83223082 83225491 + 1.70763297857488 NA non-coding (NR_015519, exon 2 of 4) non-coding (NR_015519, exon 2 of 4) 710 NR_015519 100043636 Mm.295569 NR_015519 ENSMUSG00000087107 AI662270 AW496474 expressed sequence AI662270 ncRNA common_peak2_402_4346_-0.0801172604689455_12.0457457500436_1.70699258728741 chr4 137593413 137597475 + 1.70699258728741 NA intron (NM_130879, intron 1 of 27) intron (NM_130879, intron 1 of 27) 1255 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak2_83_516_0.216678795856277_9.12235986824307_1.7069444954832 chr4 4792542 4793800 + 1.7069444954832 NA 5' UTR (NM_177730, exon 1 of 5) 5' UTR (NM_177730, exon 1 of 5) 135 NM_177730 242291 Mm.218889 NM_177730 ENSMUSG00000066324 Impad1 1110001C20Rik|AA408880|AI451589|AL022796|B230207P20|Jaws|gPAPP inositol monophosphatase domain containing 1 protein-coding common_peak1_32_244_-0.359317991341691_7.75697894333173_1.70674210519455 chr8 72420950 72421541 + 1.70674210519455 NA intron (NM_001122832, intron 1 of 15) CpG 229 NM_001122832 13859 Mm.288894 NM_007944 ENSMUSG00000006276 Eps15l1 9830147J04Rik|AI593686|Eps15-rs|Eps15R epidermal growth factor receptor pathway substrate 15-like 1 protein-coding common_peak2_32_244_-0.359317991341691_7.75697894333173_1.70674210519455 chrX 7697008 7698003 + 1.70674210519455 NA intron (NM_173747, intron 1 of 10) intron (NM_173747, intron 1 of 10) 371 NM_173747 209416 Mm.148753 NM_173747 ENSMUSG00000031148 Gpkow 4432411B18|DXErtd697e|DXImx41e|T54 G patch domain and KOW motifs protein-coding unique_peak2_55_437_-0.261609998396892_8.64398206040273_1.70652663696522 chr11 16982129 16984205 + 1.70652663696522 NA intron (NM_019549, intron 8 of 9) intron (NM_019549, intron 8 of 9) 25551 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding common_peak1_143_1290_-0.149750989875455_10.2593977903695_1.70646843496971 chr13 91223523 91224668 + 1.70646843496971 NA promoter-TSS (NM_025770) promoter-TSS (NM_025770) -108 NM_025770 66795 Mm.235385 NM_025770 ENSMUSG00000021619 Atg10 5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l autophagy related 10 protein-coding common_peak1_53_285_0.288948541247562_8.30434560740217_1.70631686078881 chr5 36840434 36841193 + 1.70631686078881 NA Intergenic RLTR33|LTR|ERVK -10164 NM_008550 17160 Mm.761 NM_008550 ENSMUSG00000029119 Man2b2 mKIAA0935 mannosidase 2, alpha B2 protein-coding common_peak1_51_403_-0.276177926924507_8.52012251928954_1.7058517578267 chr8 116943352 116944124 + 1.7058517578267 NA exon (NM_177700, exon 1 of 4) exon (NM_177700, exon 1 of 4) 345 NM_177700 234776 Mm.259736 NM_177700 ENSMUSG00000047388 Atmin Asciz|gpg6|mKIAA0431 ATM interactor protein-coding common_peak1_398_3836_0.0822717792128493_11.9468989392092_1.70550284258181 chr13 54686528 54688982 + 1.70550284258181 NA promoter-TSS (NM_134064) promoter-TSS (NM_134064) 53 NM_001146025 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak1_253_2511_-0.105797743531229_11.241721877126_1.70547168045802 chr4 126102172 126103874 + 1.70547168045802 NA promoter-TSS (NM_001145827) promoter-TSS (NM_001145827) -934 NM_028800 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding unique_peak2_20_151_-0.470452869645087_7.01270107862104_1.70540085734505 chr10 71284559 71285436 + 1.70540085734505 NA intron (NM_145420, intron 1 of 6) CpG 265 NM_145420 216080 Mm.270530 NM_145420 ENSMUSG00000019927 Ube2d1 UBCH5 ubiquitin-conjugating enzyme E2D 1 protein-coding unique_peak2_20_151_-0.470452869645087_7.01270107862104_1.70540085734505-2 chr11 102218420 102219620 + 1.70540085734505 NA intron (NM_001284248, intron 4 of 28) intron (NM_001284248, intron 4 of 28) 11130 NR_106179 102465892 NR_106179 ENSMUSG00000098863 Mir8101 Gm27705|mmu-mir-8101 microRNA 8101 ncRNA common_peak1_20_151_-0.470452869645087_7.01270107862104_1.70540085734505-3 chr9 88710182 88710715 + 1.70540085734505 NA intron (NM_001128601, intron 2 of 2) MLTR14|LTR|ERV1 9350 NM_001128601 100039707 Mm.347377 NM_001128601 ENSMUSG00000079427 Mthfsl Gm2382 5, 10-methenyltetrahydrofolate synthetase-like protein-coding common_peak1_20_151_-0.470452869645087_7.01270107862104_1.70540085734505 chr19 24983515 24983984 + 1.70540085734505 NA Intergenic Intergenic -15780 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak1_20_151_-0.470452869645087_7.01270107862104_1.70540085734505-2 chr9 56076243 56076678 + 1.70540085734505 NA Intergenic Intergenic -13516 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak2_144_1054_0.153741617796342_10.1198980924927_1.70517444731954 chr2 104589558 104591481 + 1.70517444731954 NA promoter-TSS (NM_145529) promoter-TSS (NM_145529) 35 NM_001037326 228410 Mm.259876 NM_145529 ENSMUSG00000027176 Cstf3 4732468G05Rik|C79532|CstF-77 cleavage stimulation factor, 3' pre-RNA, subunit 3 protein-coding common_peak2_80_492_0.220898246614967_9.05589295968539_1.70444110130123 chr14 21499209 21500639 + 1.70444110130123 NA 5' UTR (NM_017479, exon 1 of 17) 5' UTR (NM_017479, exon 1 of 17) 139 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding common_peak2_174_1343_0.137233878623094_10.4609343620903_1.70444027246835 chr4 55349036 55351277 + 1.70444027246835 NA 5' UTR (NM_009011, exon 1 of 10) 5' UTR (NM_009011, exon 1 of 10) 114 NM_009011 19359 Mm.196846 NM_009011 ENSMUSG00000028426 Rad23b 0610007D13Rik|AV001138|HR23B|mHR23B|p58 RAD23 homolog B, nucleotide excision repair protein protein-coding common_peak1_129_915_0.164323043422309_9.9213653098081_1.70443215952273 chr5 8421852 8423448 + 1.70443215952273 NA promoter-TSS (NM_001190717) promoter-TSS (NM_001190717) 66 NM_013726 27214 Mm.292470 NM_013726 ENSMUSG00000002297 Dbf4 AA545217|Ask DBF4 zinc finger protein-coding common_peak2_74_444_0.232488182435906_8.91390561707171_1.70405737294674 chr2 112509433 112511028 + 1.70405737294674 NA intron (NM_028844, intron 1 of 5) intron (NM_028844, intron 1 of 5) 17266 NM_028844 74268 Mm.315125 NM_028844 ENSMUSG00000003604 Aven 1700013A01Rik|1700056A21Rik|mAven-L|mAven-S apoptosis, caspase activation inhibitor protein-coding common_peak1_14_107_-0.57284338075212_6.46846581178741_1.70401129769616-2 chr5 73195126 73195483 + 1.70401129769616 NA intron (NM_028194, intron 2 of 62) L1MC5|LINE|L1 61314 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding unique_peak2_14_107_-0.57284338075212_6.46846581178741_1.70401129769616-2 chr17 73821723 73822603 + 1.70401129769616 NA intron (NM_020578, intron 3 of 5) intron (NM_020578, intron 3 of 5) 17322 NM_020578 57440 Mm.18526 NM_020578 ENSMUSG00000024065 Ehd3 Ehd2 EH-domain containing 3 protein-coding unique_peak2_14_107_-0.57284338075212_6.46846581178741_1.70401129769616 chr10 75364858 75365788 + 1.70401129769616 NA Intergenic RLTR16|LTR|ERVK 13268 NR_033602 544707 Mm.349862 NR_033602 Gm5779 EG544707 ribosomal protein, large, P0 pseudogene pseudo common_peak1_14_107_-0.57284338075212_6.46846581178741_1.70401129769616 chr10 80930899 80931358 + 1.70401129769616 NA exon (NM_008655, exon 3 of 4) exon (NM_008655, exon 3 of 4) 1037 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding unique_peak2_14_107_-0.57284338075212_6.46846581178741_1.70401129769616-3 chr17 86752815 86753724 + 1.70401129769616 NA promoter-TSS (NM_010137) promoter-TSS (NM_010137) -595 NM_010137 13819 Mm.1415 NM_010137 ENSMUSG00000024140 Epas1 HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73 endothelial PAS domain protein 1 protein-coding common_peak2_132_1176_-0.156998292376084_10.1223994588504_1.70265562823221 chr2 119207905 119209636 + 1.70265562823221 NA promoter-TSS (NM_139139) promoter-TSS (NM_139139) 25 NM_139139 69408 Mm.222241 NM_139139 ENSMUSG00000034278 Dnajc17 1700025B16Rik|C87112|D9Bwg1371e DnaJ heat shock protein family (Hsp40) member C17 protein-coding common_peak2_154_1149_0.14736964578089_10.2411029687222_1.70195126830115 chr16 30063152 30067532 + 1.70195126830115 NA promoter-TSS (NM_008235) promoter-TSS (NM_008235) -15 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hairy and enhancer of split 1 (Drosophila) protein-coding common_peak2_102_875_-0.183239175824434_9.68316747168896_1.70067727536734 chr13 59655521 59658092 + 1.70067727536734 NA intron (NM_001035122, intron 3 of 9) RMER15|LTR|ERVL 18978 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding common_peak1_48_250_0.305332682959913_8.12420989543073_1.69965970065528 chr1 52708509 52709842 + 1.69965970065528 NA exon (NM_178081, exon 2 of 6) exon (NM_178081, exon 2 of 6) 18143 NM_178081 98682 Mm.491173 NM_133829 ENSMUSG00000041439 Mfsd6 2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2 major facilitator superfamily domain containing 6 protein-coding common_peak1_43_216_0.324858821435828_7.92398064316239_1.69954688826708-2 chr14 120277137 120278056 + 1.69954688826708 NA intron (NM_175341, intron 1 of 8) intron (NM_175341, intron 1 of 8) 1927 NM_175341 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind-like 2 protein-coding common_peak1_43_216_0.324858821435828_7.92398064316239_1.69954688826708 chr11 120346238 120347075 + 1.69954688826708 NA TTS (NR_105900) TTS (NR_105900) 757 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA common_peak2_64_367_0.253352564275884_8.65023823819496_1.69953277273822 chr13 101733585 101735291 + 1.69953277273822 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) 33779 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_135_970_0.160045709114049_10.0033503399762_1.69921638779728 chr13 94358163 94359598 + 1.69921638779728 NA promoter-TSS (NM_009680) promoter-TSS (NM_009680) 43 NR_045619 328309 Mm.174191 NM_183205 Gm9776 A530089L17|ENSMUSG00000042857 predicted gene 9776 ncRNA common_peak1_115_789_0.176179093820815_9.71379838997487_1.69827338327927 chr13 67172938 67174063 + 1.69827338327927 NA intron (NM_001013769, intron 1 of 3) intron (NM_001013769, intron 1 of 3) 318 NM_001013769 380855 Mm.284988 NM_001013769 ENSMUSG00000058900 Rsl1 rslcan-9 regulator of sex limited protein 1 protein-coding common_peak1_23_173_-0.429168027756633_7.22835948197041_1.6980403830116-2 chrX 159627328 159627802 + 1.6980403830116 NA 5' UTR (NM_001135727, exon 1 of 18) 5' UTR (NM_001135727, exon 1 of 18) 293 NM_001135727 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_23_173_-0.429168027756633_7.22835948197041_1.6980403830116 chr1 182255483 182255992 + 1.6980403830116 NA Intergenic Intergenic 27022 NM_007853 13244 Mm.29648 NM_007853 ENSMUSG00000038633 Degs1 AA536663|Degs|Des1|Mdes delta(4)-desaturase, sphingolipid 1 protein-coding common_peak2_234_1960_0.113862854112186_10.9943052472482_1.69748004097327 chr12 69158150 69159988 + 1.69748004097327 NA 5' UTR (NM_009093, exon 1 of 3) 5' UTR (NM_009093, exon 1 of 3) 117 NM_009093 20090 Mm.379006 NM_009093 ENSMUSG00000034892 Rps29 - ribosomal protein S29 protein-coding common_peak2_198_1585_0.125804738143438_10.6940794247757_1.69735304922878 chr4 22356569 22358974 + 1.69735304922878 NA intron (NR_104378, intron 1 of 8) CpG 228 NR_104380 269514 Mm.40708 NM_172988 ENSMUSG00000040410 Fbxl4 AI836810|FBL4|FBL5 F-box and leucine-rich repeat protein 4 protein-coding common_peak1_93_599_0.200924708116494_9.32928104455413_1.69722315790331 chr1 60342700 60344062 + 1.69722315790331 NA promoter-TSS (NM_001313721) promoter-TSS (NM_001313721) 81 NM_001313721 77951 Mm.197640 NM_030013 ENSMUSG00000049439 Cyp20a1 A930011N14Rik|Cypm cytochrome P450, family 20, subfamily a, polypeptide 1 protein-coding common_peak1_93_599_0.200924708116494_9.32928104455413_1.69722315790331-2 chr9 87021927 87022601 + 1.69722315790331 NA intron (NM_024195, intron 1 of 15) CpG 235 NM_024195 266690 Mm.30166 NM_024195 ENSMUSG00000032872 Cyb5r4 2810034J18Rik|B5+B5R|C79736|Cb5cb5r|Ncb5or|b5/b5r|b5b5r cytochrome b5 reductase 4 protein-coding common_peak1_29_220_-0.379246126793729_7.59827949599457_1.6968379794739 chr11 95666905 95667508 + 1.6968379794739 NA intron (NM_008831, intron 1 of 6) intron (NM_008831, intron 1 of 6) 249 NM_008831 18673 Mm.263862 NM_008831 ENSMUSG00000038845 Phb Bap32 prohibitin protein-coding common_peak2_104_894_-0.180163641474799_9.71566205141422_1.69661183325321 chr11 63920547 63922421 + 1.69661183325321 NA exon (NM_018805, exon 1 of 2) exon (NM_018805, exon 1 of 2) 800 NM_018805 54710 Mm.274426 NM_018805 ENSMUSG00000070407 Hs3st3b1 3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 protein-coding common_peak2_207_1677_0.122731177760176_10.7738925893199_1.69580917961123 chr11 58329435 58331609 + 1.69580917961123 NA promoter-TSS (NM_001308168) promoter-TSS (NM_001308168) -183 NM_001256520 319475 Mm.72124 NM_178761 ENSMUSG00000049755 Zfp672 4930488P06Rik|4930511N19Rik|Znf672 zinc finger protein 672 protein-coding common_peak2_207_1677_0.122731177760176_10.7738925893199_1.69580917961123-2 chr6 131291734 131294641 + 1.69580917961123 NA promoter-TSS (NM_025564) promoter-TSS (NM_025564) 57 NM_025564 66441 Mm.46623 NM_025564 ENSMUSG00000030188 Magohb 2010012C16Rik|Mago|Magoh|Magoh-rs1 mago homolog B, exon junction complex core component protein-coding unique_peak2_26_196_-0.399844252616782_7.42212969314799_1.69573467875593 chr10 80955820 80957187 + 1.69573467875593 NA intron (NM_010319, intron 2 of 3) intron (NM_010319, intron 2 of 3) 26412 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak1_26_196_-0.399844252616782_7.42212969314799_1.69573467875593 chr2 164822905 164823561 + 1.69573467875593 NA intron (NM_028028, intron 1 of 1) intron (NM_028028, intron 1 of 1) 547 NM_028028 71971 Mm.161149 NM_028028 ENSMUSG00000017764 Zswim1 2410003H12Rik|AI850991|BB046916 zinc finger SWIM-type containing 1 protein-coding common_peak1_26_196_-0.399844252616782_7.42212969314799_1.69573467875593-2 chr5 62574154 62574804 + 1.69573467875593 NA Intergenic Intergenic 191698 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding unique_peak2_22_166_-0.445243488380542_7.16108254828378_1.69549350760727-4 chr5 134176159 134176871 + 1.69549350760727 NA exon (NM_033572, exon 1 of 11) exon (NM_033572, exon 1 of 11) 252 NM_033572 94254 Mm.29508 NM_033572 ENSMUSG00000061979 Rcc1l 5730496C04Rik|AU019812|Wbscr16 reculator of chromosome condensation 1 like protein-coding unique_peak2_22_166_-0.445243488380542_7.16108254828378_1.69549350760727-3 chr3 79504024 79505258 + 1.69549350760727 NA intron (NM_001162999, intron 7 of 16) L1MC3|LINE|L1 63038 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding common_peak1_22_166_-0.445243488380542_7.16108254828378_1.69549350760727 chr6 99275267 99275770 + 1.69549350760727 NA intron (NM_053202, intron 2 of 18) intron (NM_053202, intron 2 of 18) -9003 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_22_166_-0.445243488380542_7.16108254828378_1.69549350760727-2 chr17 42892023 42893124 + 1.69549350760727 NA Intergenic MMVL30-int|LTR|ERV1 -16149 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding unique_peak2_22_166_-0.445243488380542_7.16108254828378_1.69549350760727 chr14 27562273 27563350 + 1.69549350760727 NA Intergenic IAPLTR3-int|LTR|ERVK -54351 NM_177111 320234 Mm.247767 NM_177111 ENSMUSG00000046753 Ccdc66 E230015L20Rik coiled-coil domain containing 66 protein-coding common_peak1_22_166_-0.445243488380542_7.16108254828378_1.69549350760727-2 chr8 120113492 120113941 + 1.69549350760727 NA promoter-TSS (NM_001163762) promoter-TSS (NM_001163762) -436 NM_001163762 234797 Mm.101958 NM_172286 ENSMUSG00000031824 6430548M08Rik AW049007|Kiaa0513|mKIAA0513 RIKEN cDNA 6430548M08 gene protein-coding common_peak1_65_526_-0.237726892789977_8.92279570524223_1.69538646045371-2 chr5 25222622 25223522 + 1.69538646045371 NA intron (NM_144908, intron 1 of 11) CpG 179 NM_144908 231050 Mm.21814 NM_144908 ENSMUSG00000038072 Galnt11 A430075I06Rik|AI648252|E430002F06Rik UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 protein-coding common_peak1_65_526_-0.237726892789977_8.92279570524223_1.69538646045371 chr12 25364563 25365551 + 1.69538646045371 NA Intergenic Intergenic 235883 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_28_212_-0.38604630571327_7.5416864673692_1.69533500650283 chr18 35912873 35914190 + 1.69533500650283 NA Intergenic Intergenic -51299 NM_028707 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding common_peak2_35_163_0.373745668440939_7.54442483883855_1.69533500650278 chr5 3460327 3461765 + 1.69533500650278 NA intron (NM_009873, intron 4 of 7) intron (NM_009873, intron 4 of 7) -82787 NM_001042501 68152 Mm.240265 NM_026583 ENSMUSG00000058503 Fam133b 2900022K02Rik|5830415L20Rik family with sequence similarity 133, member B protein-coding common_peak2_67_390_0.24573608603953_8.73389284032712_1.6951644420929 chr4 123717635 123718888 + 1.6951644420929 NA promoter-TSS (NM_001030274) promoter-TSS (NM_001030274) -75 NM_001030274 595136 Mm.42805 NM_001030274 ENSMUSG00000028648 Ndufs5 AI256693 NADH dehydrogenase (ubiquinone) Fe-S protein 5 protein-coding common_peak1_58_464_-0.255560500953569_8.73330665551861_1.6951644420929 chr13 67108080 67108853 + 1.6951644420929 NA intron (NM_001256052, intron 2 of 6) intron (NM_001256052, intron 2 of 6) 5562 NM_001256052 432770 Mm.124021 NM_001256052 ENSMUSG00000074824 Rslcan18 mszf51 regulator of sex-limitation candidate 18 protein-coding common_peak2_144_1300_-0.148636345326906_10.2710870740543_1.69509688632151 chr2 73910115 73912126 + 1.69509688632151 NA intron (NM_001301722, intron 1 of 4) CpG-8181 206 NM_175015 228033 Mm.2966 NM_175015 ENSMUSG00000018770 Atp5g3 6030447M23 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) protein-coding common_peak2_27_204_-0.392915349487521_7.48302242476169_1.69491965665321-2 chr6 125426578 125427187 + 1.69491965665321 NA Intergenic Intergenic -46378 NM_198604 213522 Mm.333396 NM_198604 ENSMUSG00000038167 Plekhg6 BC026778|Gm155 pleckstrin homology domain containing, family G (with RhoGef domain) member 6 protein-coding common_peak1_27_204_-0.392915349487521_7.48302242476169_1.69491965665321 chr8 36096374 36096969 + 1.69491965665321 NA intron (NM_172911, intron 1 of 5) intron (NM_172911, intron 1 of 5) 1843 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding unique_peak2_27_204_-0.392915349487521_7.48302242476169_1.69491965665321 chr14 54605482 54606656 + 1.69491965665321 NA promoter-TSS (NM_028890) promoter-TSS (NM_028890) -161 NM_028890 74359 Mm.79815 NM_028890 ENSMUSG00000022179 4931414P19Rik - RIKEN cDNA 4931414P19 gene protein-coding unique_peak2_27_204_-0.392915349487521_7.48302242476169_1.69491965665321-2 chr9 96369060 96370485 + 1.69491965665321 NA Intergenic Lx8|LINE|L1 -5473 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak2_27_204_-0.392915349487521_7.48302242476169_1.69491965665321 chr15 103162859 103163837 + 1.69491965665321 NA promoter-TSS (NM_027885) promoter-TSS (NM_027885) -64 NM_027885 71726 Mm.254820 NM_027885 ENSMUSG00000036061 Smug1 1200013B09Rik|A930006H09Rik|C85220 single-strand selective monofunctional uracil DNA glycosylase protein-coding common_peak1_60_337_0.263640014764789_8.53269944366458_1.69447437587657-2 chr11 87720352 87721529 + 1.69447437587657 NA intron (NM_172448, intron 3 of 9) intron (NM_172448, intron 3 of 9) -16625 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding common_peak1_60_337_0.263640014764789_8.53269944366458_1.69447437587657 chr11 26640128 26641282 + 1.69447437587657 NA Intergenic Intergenic -46785 NM_001252447 69922 Mm.285351 NM_027260 ENSMUSG00000064090 Vrk2 2810003O05Rik|AI447698 vaccinia related kinase 2 protein-coding common_peak1_120_1053_-0.165092307001766_9.95911299813633_1.69302228594006 chr18 36669438 36670791 + 1.69302228594006 NA exon (NM_001164406, exon 2 of 4) exon (NM_001164406, exon 2 of 4) 197 NM_001164406 24068 Mm.29058 NM_025291 ENSMUSG00000006050 Sra1 AA959952|Sra|Srap|Straa1|Strra1 steroid receptor RNA activator 1 protein-coding common_peak2_42_209_0.331481652587828_7.87998634396004_1.69290886658798 chr6 49319106 49319903 + 1.69290886658798 NA intron (NM_001311112, intron 1 of 3) CpG 230 NM_001311112 57895 Mm.32416 NM_175098 ENSMUSG00000050786 Ccdc126 6330407D12Rik|AA675040|AI465320|AL022711 coiled-coil domain containing 126 protein-coding common_peak1_17_60_0.573948024309781_6.21771134971778_1.69288202389467 chr8 46780686 46781111 + 1.69288202389467 NA intron (NM_008391, intron 1 of 8) intron (NM_008391, intron 1 of 8) 41153 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_24_181_-0.421779448062312_7.29690491616754_1.69286608779087 chr6 136520096 136520758 + 1.69286608779087 NA intron (NM_019426, intron 1 of 14) intron (NM_019426, intron 1 of 14) 1576 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak2_169_1294_0.139517776464931_10.4084952708064_1.69259618876021 chr2 144526730 144528440 + 1.69259618876021 NA promoter-TSS (NM_172859) promoter-TSS (NM_172859) -160 NM_029763 70408 Mm.389351 NM_029763 ENSMUSG00000027427 Polr3f 2810411G20Rik|3010019O03Rik|3110032A07Rik|RPC39|RPC6 polymerase (RNA) III (DNA directed) polypeptide F protein-coding common_peak2_169_1294_0.139517776464931_10.4084952708064_1.69259618876021-2 chr4 155830681 155832799 + 1.69259618876021 NA intron (NM_025338, intron 1 of 3) CpG 471 NM_025338 66077 Mm.28999 NM_025338 ENSMUSG00000065990 Aurkaip1 0610033H09Rik|Aip|Akip|MRP-S38 aurora kinase A interacting protein 1 protein-coding common_peak2_149_1101_0.150853510904867_10.1813352640236_1.69238354071822-2 chr14 21500680 21501866 + 1.69238354071822 NA intron (NM_017479, intron 1 of 16) CpG 1488 NM_017479 54169 Mm.248967 NM_017479 ENSMUSG00000021767 Kat6b AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf K(lysine) acetyltransferase 6B protein-coding common_peak2_149_1101_0.150853510904867_10.1813352640236_1.69238354071822 chr13 98262173 98263924 + 1.69238354071822 NA promoter-TSS (NM_023472) promoter-TSS (NM_023472) -28 NM_001271392 68558 Mm.209642 NM_023472 ENSMUSG00000021661 Ankra2 1110004M18Rik|Ankra ankyrin repeat, family A (RFXANK-like), 2 protein-coding common_peak1_91_768_-0.195154361495604_9.48926260721402_1.69180361100887 chr11 94327537 94328874 + 1.69180361100887 NA 5' UTR (NM_146024, exon 1 of 5) 5' UTR (NM_146024, exon 1 of 5) 204 NM_146024 71452 Mm.141054 NM_027799 ENSMUSG00000020864 Ankrd40 1110011C06Rik|5530600A18Rik|Gcap15 ankyrin repeat domain 40 protein-coding common_peak2_167_1275_0.139898963592698_10.3873620955612_1.69153654584404 chr15 58822511 58824609 + 1.69153654584404 NA promoter-TSS (NM_175212) promoter-TSS (NM_175212) -133 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding common_peak2_71_580_-0.22448436915915_9.07015216882495_1.69138434081551 chr10 118418011 118420029 + 1.69138434081551 NA Intergenic Intergenic -22026 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak1_44_342_-0.295886128608181_8.27412170186872_1.69127457787178 chr5 96918610 96919326 + 1.69127457787178 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -2304 NR_131152 666266 Mm.32442 NR_131152 ENSMUSG00000106357 Gm8013 EG666266 predicted gene 8013 ncRNA common_peak1_100_658_0.192713538597406_9.46049142430675_1.69099254726655 chr14 78536155 78537463 + 1.69099254726655 NA promoter-TSS (NM_001164503) promoter-TSS (NM_001164503) 51 NM_001164503 219181 Mm.89413 NM_001164503 ENSMUSG00000022016 Akap11 6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629 A kinase (PRKA) anchor protein 11 protein-coding common_peak2_47_243_0.309650441715565_8.08556255842067_1.69070514921307 chr1 161782100 161784011 + 1.69070514921307 NA intron (NM_001205243, intron 1 of 2) intron (NM_001205243, intron 1 of 2) 5440 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding unique_peak2_9_71_-0.705403084997893_5.81722345894337_1.69048838080306-3 chr6 129282818 129283400 + 1.69048838080306 NA Intergenic Intergenic -7740 NM_001033122 12515 Mm.74745 NM_001033122 ENSMUSG00000030156 Cd69 5830438K24Rik|AI452015|AIM|VEA CD69 antigen protein-coding unique_peak2_9_71_-0.705403084997893_5.81722345894337_1.69048838080306-4 chr8 25171312 25172054 + 1.69048838080306 NA intron (NM_177089, intron 5 of 12) intron (NM_177089, intron 5 of 12) -12450 NR_106187 102467006 NR_106187 ENSMUSG00000099142 Mir8108 Gm27484|mmu-mir-8108 microRNA 8108 ncRNA unique_peak2_9_71_-0.705403084997893_5.81722345894337_1.69048838080306-5 chr9 56437247 56437737 + 1.69048838080306 NA intron (NM_025812, intron 1 of 9) intron (NM_025812, intron 1 of 9) 18646 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding unique_peak2_9_71_-0.705403084997893_5.81722345894337_1.69048838080306-2 chr4 134796883 134797457 + 1.69048838080306 NA Intergenic Intergenic -29166 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding unique_peak2_9_71_-0.705403084997893_5.81722345894337_1.69048838080306 chr2 130642361 130642846 + 1.69048838080306 NA intron (NM_001291027, intron 1 of 4) CpG 241 NM_197945 241638 Mm.440130 NM_197945 ENSMUSG00000037703 Lzts3 Prosapip1 leucine zipper, putative tumor suppressor family member 3 protein-coding common_peak2_96_816_-0.188853904782274_9.57976531575455_1.69029411375293 chr19 57098933 57101357 + 1.69029411375293 NA intron (NM_001290813, intron 6 of 20) ORR1E|LTR|ERVL-MaLR 18879 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_228_1897_0.115203617737063_10.9478660858896_1.69014727798899 chr18 3279670 3282771 + 1.69014727798899 NA promoter-TSS (NM_001311067) promoter-TSS (NM_001311067) -88 NM_001311067 12916 Mm.5244 NM_013498 ENSMUSG00000063889 Crem ICER|ICERI cAMP responsive element modulator protein-coding common_peak2_49_385_-0.279829533945339_8.45254227029541_1.68972847432915 chrX 85573307 85574761 + 1.68972847432915 NA promoter-TSS (NM_025729) promoter-TSS (NM_025729) 12 NM_025729 66724 Mm.119646 NM_025729 ENSMUSG00000035476 Tab3 4921526G09Rik|Map3k7ip3|mKIAA4135 TGF-beta activated kinase 1/MAP3K7 binding protein 3 protein-coding common_peak2_198_1883_-0.122601455765366_10.8182825217301_1.68964372414361 chr17 69382331 69385256 + 1.68964372414361 NA promoter-TSS (NM_009547) promoter-TSS (NM_009547) -185 NM_009547 22666 Mm.29434 NM_009547 ENSMUSG00000049672 Zbtb14 ZF5|Zfp161|b2b1982Clo zinc finger and BTB domain containing 14 protein-coding unique_peak2_25_189_-0.414434363690016_7.36263842648594_1.68947911261273 chr1 16641592 16642996 + 1.68947911261273 NA TTS (NM_026456) TTS (NM_026456) 14571 NM_026456 67923 Mm.289248 NM_026456 ENSMUSG00000079658 Eloc 2610043E24Rik|2610301I15Rik|AA407206|AI987979|AW049146|Tceb1 elongin C protein-coding common_peak1_25_189_-0.414434363690016_7.36263842648594_1.68947911261273-2 chrX 74428451 74428911 + 1.68947911261273 NA promoter-TSS (NM_010547) promoter-TSS (NM_010547) 480 NM_008062 14381 Mm.27210 NM_008062 ENSMUSG00000031400 G6pdx G28A|G6pd|Gpdx glucose-6-phosphate dehydrogenase X-linked protein-coding common_peak1_25_189_-0.414434363690016_7.36263842648594_1.68947911261273 chr19 11064637 11065203 + 1.68947911261273 NA Intergenic Lx3C|LINE|L1 -14354 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA unique_peak2_25_189_-0.414434363690016_7.36263842648594_1.68947911261273-2 chr1 51466301 51468050 + 1.68947911261273 NA Intergenic Intergenic 11224 NM_028696 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak1_308_3167_-0.0936742201495875_11.5825195100048_1.68866337784473 chr15 12204947 12207154 + 1.68866337784473 NA intron (NM_172958, intron 1 of 15) intron (NM_172958, intron 1 of 15) 956 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak1_181_1695_-0.128963100656796_10.6634389042348_1.68865885239301 chr8 88293239 88295276 + 1.68865885239301 NA promoter-TSS (NM_001037724) promoter-TSS (NM_001037724) 53 NM_001037724 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding common_peak1_57_454_-0.254447109387133_8.70249918039249_1.68864227581693 chr5 4192319 4193167 + 1.68864227581693 NA intron (NM_001042670, intron 1 of 1) intron (NM_001042670, intron 1 of 1) 376 NM_001042670 208595 Mm.129815 NM_001042670 ENSMUSG00000053178 Mterf1b ENSMUSG00000053178|Gm9897 mitochondrial transcription termination factor 1b protein-coding common_peak1_53_419_-0.265425639640172_8.58153269784604_1.6883993130316 chr8 86835245 86836155 + 1.6883993130316 NA Intergenic Intergenic 49558 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding unique_peak2_53_419_-0.265425639640172_8.58153269784604_1.6883993130316 chr5 21225833 21227904 + 1.6883993130316 NA intron (NM_175437, intron 10 of 30) intron (NM_175437, intron 10 of 30) 40601 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_108_933_-0.175536504180025_9.77951048761965_1.688157026808 chr16 92801774 92802659 + 1.688157026808 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 23858 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_139_1247_-0.150731881966003_10.2100362778792_1.68723654636093 chr6 13676881 13678777 + 1.68723654636093 NA exon (NM_175312, exon 1 of 5) exon (NM_175312, exon 1 of 5) 137 NM_175312 101148 Mm.354863 NM_175312 ENSMUSG00000042742 Bmt2 AI666701|B630005N14Rik base methyltransferase of 25S rRNA 2 protein-coding unique_peak2_15_114_-0.549236787819207_6.57087165703477_1.68695178461473 chr10 93419319 93420197 + 1.68695178461473 NA Intergenic Intergenic -13349 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA unique_peak2_15_114_-0.549236787819207_6.57087165703477_1.68695178461473-2 chr15 80619264 80620286 + 1.68695178461473 NA intron (NM_001289442, intron 1 of 7) intron (NM_001289442, intron 1 of 7) -3708 NM_010815 17444 Mm.12947 NM_010815 ENSMUSG00000042351 Grap2 GRAP-2|GRB2L|GRBLG|GRID|Gads|GrbX|Grf40|GrpL|Mona|P38 GRB2-related adaptor protein 2 protein-coding unique_peak2_15_114_-0.549236787819207_6.57087165703477_1.68695178461473-3 chr5 29901104 29901972 + 1.68695178461473 NA intron (NR_105781, intron 1 of 2) Tigger5b|DNA|TcMar-Tigger -111576 NM_001314054 16193 Mm.1019 NM_031168 ENSMUSG00000025746 Il6 Il-6 interleukin 6 protein-coding common_peak1_15_114_-0.549236787819207_6.57087165703477_1.68695178461473 chr14 25606274 25606654 + 1.68695178461473 NA TTS (NM_001309430) TTS (NM_001309430) 2951 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding unique_peak2_15_114_-0.549236787819207_6.57087165703477_1.68695178461473-4 chrX 52760267 52761046 + 1.68695178461473 NA Intergenic Intergenic -16063 NR_003188 751866 Mm.381916 NR_003188 Kis2 Kis2-T1|Kis2-T2|Kis2-T3|Kis2-T4|Kis2-T5|Platr24|Xpcl1 Kaplan integration site 2 ncRNA common_peak1_107_719_0.183579092882633_9.58364264277099_1.68667357252986 chr2 119547066 119548267 + 1.68667357252986 NA promoter-TSS (NM_172857) promoter-TSS (NM_172857) -39 NM_172857 241624 Mm.212773 NM_172857 ENSMUSG00000048647 Exd1 4932702D22Rik|Exdl1|mExd1 exonuclease 3'-5' domain containing 1 protein-coding common_peak1_123_861_0.16836276801792_9.83572544309806_1.6858812178518 chr13 85430378 85431801 + 1.6858812178518 NA Intergenic MIR|SINE|MIR -141603 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak2_224_1855_0.116303229315379_10.9161326097853_1.68554868534694 chrX 151519672 151522377 + 1.68554868534694 NA 5' UTR (NM_001113354, exon 1 of 22) 5' UTR (NM_001113354, exon 1 of 22) 352 NM_001113354 320595 Mm.17156 NM_177201 ENSMUSG00000041229 Phf8 9830141C09Rik|mKIAA1111 PHD finger protein 8 protein-coding common_peak2_93_787_-0.192308420844_9.52589760903438_1.685328990904 chr2 165285764 165288255 + 1.685328990904 NA intron (NM_144893, intron 1 of 9) intron (NM_144893, intron 1 of 9) 778 NM_001252574 228875 Mm.21184 NM_144893 ENSMUSG00000017664 Slc35c2 C85957|CGI-15|D2Wsu58e|Ovcov1 solute carrier family 35, member C2 protein-coding common_peak1_66_382_0.249343118224767_8.70587214103734_1.68531813731649 chr18 42261519 42262219 + 1.68531813731649 NA intron (NM_134137, intron 1 of 31) intron (NM_134137, intron 1 of 31) 202 NM_134137 107045 Mm.312170 NM_134137 ENSMUSG00000024493 Lars 2310045K21Rik|3110009L02Rik|AW536573|mKIAA1352 leucyl-tRNA synthetase protein-coding common_peak1_195_1555_0.126474514297204_10.6668636021348_1.68524511687583 chr1 133024814 133026368 + 1.68524511687583 NA promoter-TSS (NR_126506) promoter-TSS (NR_126506) -175 NM_001302801 17248 Mm.426531 NM_008575 ENSMUSG00000054387 Mdm4 4933417N07Rik|AA414968|AL023055|AU018793|AU021806|C85810|Mdmx transformed mouse 3T3 cell double minute 4 protein-coding common_peak1_98_835_-0.185904668266719_9.61440679794752_1.68507016130805 chr11 79145396 79146568 + 1.68507016130805 NA intron (NM_013571, intron 1 of 17) CpG 372 NM_013571 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb kinase suppressor of ras 1 protein-coding common_peak2_171_1586_-0.133134620208519_10.5655191027309_1.68479911031639 chr5 67845562 67848480 + 1.68479911031639 NA intron (NM_009727, intron 1 of 35) intron (NM_009727, intron 1 of 35) 410 NM_001284345 11980 Mm.153230 NM_009727 ENSMUSG00000037685 Atp8a1 AI481521|AI853962|APLT|AW743152|AW822227|Atp3a2|B230107D19Rik|ClassI ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 protein-coding unique_peak2_37_284_-0.327841594468858_7.99089731181768_1.68455596731781 chr9 22649366 22651439 + 1.68455596731781 NA intron (NM_181316, intron 14 of 21) B1F2|SINE|Alu 174687 NM_178415 319845 Mm.176725 NM_178415 ENSMUSG00000035919 Bbs9 E130103I17Rik Bardet-Biedl syndrome 9 (human) protein-coding common_peak2_64_517_-0.239893767353658_8.89686140400973_1.68449600033795 chr2 85047108 85049213 + 1.68449600033795 NA Intergenic CpG -2300 NM_001081260 228140 Mm.23606 NM_001081260 ENSMUSG00000033955 Tnks1bp1 Tab182|mKIAA1741 tankyrase 1 binding protein 1 protein-coding common_peak1_64_517_-0.239893767353658_8.89686140400973_1.68449600033795 chr5 124015976 124016617 + 1.68449600033795 NA intron (NM_177876, intron 1 of 3) B1_Mus2|SINE|Alu 15964 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak2_193_1534_0.127927734292223_10.6479868074037_1.68437253535751 chr6 65646197 65649134 + 1.68437253535751 NA Intergenic Intergenic -23946 NM_172399 68169 Mm.52392 NM_172399 ENSMUSG00000049001 Ndnf A930038C07Rik|epidermacan neuron-derived neurotrophic factor protein-coding common_peak2_102_676_0.188535860201743_9.49727995367587_1.68410845792963 chr5 72167231 72168320 + 1.68410845792963 NA intron (NM_178599, intron 1 of 4) intron (NM_178599, intron 1 of 4) 408 NM_178599 27784 Mm.44223 NM_178599 ENSMUSG00000029213 Commd8 C77770|D5Buc26e COMM domain containing 8 protein-coding common_peak1_110_953_-0.173927288640815_9.8108818116851_1.68379077585752 chr4 95050468 95052223 + 1.68379077585752 NA 5' UTR (NM_010591, exon 1 of 1) 5' UTR (NM_010591, exon 1 of 1) 877 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_81_500_0.219388783056575_9.07836118472349_1.6836663670482 chr12 110435770 110437746 + 1.6836663670482 NA Intergenic Intergenic -10421 NM_001135001 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_116_798_0.175026272833168_9.72956482934456_1.68346044208051 chr18 62178583 62180004 + 1.68346044208051 NA exon (NM_007420, exon 1 of 1) exon (NM_007420, exon 1 of 1) 688 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak1_174_1344_0.136160843957867_10.4614708794229_1.68322787654251 chr11 83019456 83021445 + 1.68322787654251 NA intron (NM_181545, intron 1 of 5) intron (NM_181545, intron 1 of 5) 272 NM_001167743 276950 Mm.491599 NM_181545 ENSMUSG00000035208 Slfn8 - schlafen 8 protein-coding common_peak1_18_65_0.555970084038437_6.32237916137767_1.68268334293412-4 chrX 70476677 70477133 + 1.68268334293412 NA intron (NM_001033328, intron 1 of 5) intron (NM_001033328, intron 1 of 5) 138 NM_001033328 236848 Mm.24569 NM_001033328 ENSMUSG00000073139 Tmem185a - transmembrane protein 185A protein-coding common_peak1_18_65_0.555970084038437_6.32237916137767_1.68268334293412-2 chr2 119596260 119596723 + 1.68268334293412 NA non-coding (NR_015473, exon 2 of 3) non-coding (NR_015473, exon 2 of 3) 2195 NR_015473 66602 Mm.379181 NR_015473 ENSMUSG00000085438 1700020I14Rik 1190006L01Rik|4933437I03Rik|AI451541|AI585852|AW538376|AW558897|Cyrano RIKEN cDNA 1700020I14 gene ncRNA common_peak1_18_65_0.555970084038437_6.32237916137767_1.68268334293412-3 chr7 4526615 4527049 + 1.68268334293412 NA intron (NM_001033548, intron 8 of 11) intron (NM_001033548, intron 8 of 11) -4389 NM_009406 21954 Mm.27674 NM_009406 ENSMUSG00000035458 Tnni3 Tn1|cTnI troponin I, cardiac 3 protein-coding unique_peak2_18_65_0.555970084038437_6.32237916137767_1.68268334293412 chr14 25377082 25377532 + 1.68268334293412 NA Intergenic Intergenic -81878 NM_001310666 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_18_65_0.555970084038437_6.32237916137767_1.68268334293412 chr1 173940394 173940829 + 1.68268334293412 NA intron (NM_001302650, intron 2 of 8) intron (NM_001302650, intron 2 of 8) 1881 NM_001302649 15950 Mm.463437 NM_008328 ENSMUSG00000039997 Ifi203 Mndal interferon activated gene 203 protein-coding common_peak1_18_65_0.555970084038437_6.32237916137767_1.68268334293412-5 chrX 136977055 136977454 + 1.68268334293412 NA promoter-TSS (NM_207267) promoter-TSS (NM_207267) -380 NM_207267 399591 Mm.381904 NM_207267 ENSMUSG00000072955 Tmsb15l 4930488E11Rik|Tb15r|Tmsb15b1-Tmsb15b2|Tmsb15r thymosin beta 15b like protein-coding common_peak1_161_1479_-0.138427066337078_10.4621679273478_1.68224824687577 chr6 54809245 54811422 + 1.68224824687577 NA Intergenic Intergenic -6583 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_48_376_-0.281544476357979_8.41764847508967_1.68201842774852 chr10 96328025 96328774 + 1.68201842774852 NA Intergenic Intergenic 102192 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_90_758_-0.195611032695419_9.47015055906776_1.68119630070833 chr7 3628987 3630001 + 1.68119630070833 NA promoter-TSS (NM_001159714) promoter-TSS (NM_001159714) 435 NM_023524 69714 Mm.358730 NM_023524 ENSMUSG00000006335 Tfpt 2400004F01Rik|AI450389|Amida|FB1 TCF3 (E2A) fusion partner protein-coding common_peak2_148_1092_0.150847316435716_10.1695013438898_1.68094953327127 chr11 74958701 74961245 + 1.68094953327127 NA intron (NM_001002764, intron 8 of 18) intron (NM_001002764, intron 8 of 18) 34101 NM_001002764 103677 Mm.288460 NM_001002764 ENSMUSG00000038290 Smg6 AI317223|AU041178 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_148_1092_0.150847316435716_10.1695013438898_1.68094953327127 chr13 98262251 98263767 + 1.68094953327127 NA promoter-TSS (NM_023472) promoter-TSS (NM_023472) -17 NM_178918 105372 Mm.28221 NM_178918 ENSMUSG00000041747 Utp15 AW544865 UTP15 small subunit processome component protein-coding common_peak1_43_334_-0.301607231464828_8.23721366961272_1.68085893563189 chr1 4807501 4808258 + 1.68085893563189 NA promoter-TSS (NM_008866) promoter-TSS (NM_008866) -14 NM_008866 18777 Mm.299955 NM_008866 ENSMUSG00000025903 Lypla1 Pla1a lysophospholipase 1 protein-coding common_peak2_51_272_0.289276414907436_8.23739534837357_1.68085893563189 chr14 54882813 54884066 + 1.68085893563189 NA promoter-TSS (NM_007537) promoter-TSS (NM_007537) 14 NM_007537 12050 Mm.6967 NM_007537 ENSMUSG00000089682 Bcl2l2 AW048834|Bcl-w|Gtrgal2|Gtrosa41|bclw|c98 BCL2-like 2 protein-coding common_peak1_51_272_0.289276414907436_8.23739534837357_1.68085893563189 chr2 11375323 11376091 + 1.68085893563189 NA intron (NR_040615, intron 1 of 2) intron (NR_040615, intron 1 of 2) 22793 NR_040615 77543 Mm.490670 NR_040615 ENSMUSG00000102674 8030442B05Rik - RIKEN cDNA 8030442B05 gene ncRNA common_peak1_51_272_0.289276414907436_8.23739534837357_1.68085893563189-2 chr6 3397294 3398470 + 1.68085893563189 NA intron (NM_010156, intron 1 of 1) intron (NM_010156, intron 1 of 1) 1689 NM_010156 209086 Mm.196013 NM_010156 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like protein-coding common_peak2_43_334_-0.301607231464828_8.23721366961272_1.68085893563189 chr15 55089664 55090975 + 1.68085893563189 NA exon (NM_183089, exon 1 of 9) exon (NM_183089, exon 1 of 9) 159 NM_183089 72107 Mm.486550 NM_183089 ENSMUSG00000022422 Dscc1 2010006I05Rik|2600005O03Rik|Dcc1 DNA replication and sister chromatid cohesion 1 protein-coding common_peak2_41_203_0.33166161301336_7.83825614847817_1.68073382009622 chr17 3272675 3274028 + 1.68073382009622 NA Intergenic MIRb|SINE|MIR -53222 NM_001122998 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding unique_peak2_41_203_0.33166161301336_7.83825614847817_1.68073382009622 chr9 66894481 66896125 + 1.68073382009622 NA intron (NM_173413, intron 1 of 7) intron (NM_173413, intron 1 of 7) 24402 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak2_321_2927_0.0929093862612955_11.5621545314147_1.68010242992929 chr7 6154392 6157673 + 1.68010242992929 NA promoter-TSS (NM_001013012) promoter-TSS (NM_001013012) -61 NM_001013012 67109 Mm.3254 NM_001013012 ENSMUSG00000046792 Zfp787 2210018M03Rik|Znf787 zinc finger protein 787 protein-coding common_peak2_160_1207_0.1435921740339_10.310200826342_1.67994675277951 chr3 37311846 37315138 + 1.67994675277951 NA intron (NM_001255992, intron 1 of 1) L2|LINE|L2 938 NM_001255992 241950 Mm.32171 NM_001008502 ENSMUSG00000051444 Bbs12 Gm1805|Gm407|Gm721 Bardet-Biedl syndrome 12 (human) protein-coding common_peak2_33_151_0.382221058716942_7.43903804280206_1.67965118669137 chr11 46370058 46371293 + 1.67965118669137 NA intron (NM_001281965, intron 1 of 16) intron (NM_001281965, intron 1 of 16) 18840 NM_001281968 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding common_peak1_52_410_-0.267252818238571_8.5493681745624_1.67958854071687 chr12 85455494 85456213 + 1.67958854071687 NA Intergenic Intergenic -18048 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak1_156_1169_0.145182819934883_10.2648842244382_1.67918007901957 chr14 59596837 59598666 + 1.67918007901957 NA intron (NM_001168536, intron 1 of 9) CpG 208 NM_001168537 71891 Mm.439850 NM_027986 ENSMUSG00000021982 Cdadc1 2310010M10Rik|AI449174|AI463398|BB130816|NYD-SP15 cytidine and dCMP deaminase domain containing 1 protein-coding common_peak2_121_1063_-0.16415067326786_9.97320709886726_1.67917762906658 chr5 100428717 100430686 + 1.67917762906658 NA promoter-TSS (NR_034038) promoter-TSS (NR_034038) -166 NR_034038 100503199 Mm.392282 NR_034038 ENSMUSG00000097772 5430416N02Rik 100041797|Adapt33|Gm3514 RIKEN cDNA 5430416N02 gene ncRNA common_peak1_56_445_-0.256401180370132_8.67269930973524_1.67896319681341 chr8 72364724 72365983 + 1.67896319681341 NA intron (NM_007944, intron 21 of 23) intron (NM_007944, intron 21 of 23) 46291 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak2_62_352_0.258084786680602_8.59256676661148_1.67761492115514 chr16 37010594 37012224 + 1.67761492115514 NA promoter-TSS (NM_029977) promoter-TSS (NM_029977) -377 NM_029977 77782 Mm.259114 NM_029977 ENSMUSG00000034206 Polq A430110D14Rik polymerase (DNA directed), theta protein-coding common_peak1_136_1216_-0.15277589617887_10.1727255046243_1.6773635938199 chr9 44964781 44966483 + 1.6773635938199 NA promoter-TSS (NM_145400) promoter-TSS (NM_145400) -32 NM_145400 140630 Mm.215069 NM_145400 ENSMUSG00000059890 Ube4a 4732444G18Rik|9930123J21Rik|UFD2b ubiquitination factor E4A protein-coding common_peak2_136_1216_-0.15277589617887_10.1727255046243_1.6773635938199 chr14 70598759 70600444 + 1.6773635938199 NA intron (NM_194345, intron 1 of 16) CpG 234 NM_194345 239170 Mm.247582 NM_194345 ENSMUSG00000022095 Fam160b2 G430067P06Rik|Rai16 family with sequence similarity 160, member B2 protein-coding common_peak2_326_3386_-0.0899155198112354_11.6808345115885_1.67713430642522 chr6 48721994 48731003 + 1.67713430642522 NA Intergenic Intergenic 7877 NM_146167 231932 Mm.30479 NM_146167 ENSMUSG00000043931 Gimap7 IAN7|Ian3 GTPase, IMAP family member 7 protein-coding common_peak1_36_276_-0.333958514837779_7.9467629086303_1.67689273674597 chr2 165208172 165208897 + 1.67689273674597 NA intron (NM_174988, intron 1 of 11) RSINE1|SINE|B4 26203 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak2_46_237_0.308313324118074_8.04897442536698_1.67685202588898 chr4 6190613 6191721 + 1.67685202588898 NA promoter-TSS (NM_026534) promoter-TSS (NM_026534) 62 NM_026534 68053 Mm.404043 NM_026534 ENSMUSG00000028243 Ubxn2b 3110003A22Rik|6430407D20Rik|AI451665|p37 UBX domain protein 2B protein-coding common_peak1_46_237_0.308313324118074_8.04897442536698_1.67685202588898 chr7 101361805 101362929 + 1.67685202588898 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) 14298 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak2_63_507_-0.239206801274285_8.86908128613502_1.67661055218945-2 chr17 72947841 72950323 + 1.67661055218945 NA Intergenic Intergenic 30777 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_63_507_-0.239206801274285_8.86908128613502_1.67661055218945 chr1 177441179 177443347 + 1.67661055218945 NA Intergenic CpG -2398 NM_001012330 30928 Mm.330700 NM_013915 ENSMUSG00000063659 Zbtb18 RP58|Zfp238|Znf238 zinc finger and BTB domain containing 18 protein-coding unique_peak2_7_58_-0.81300209742303_5.47614200065033_1.67641628704619 chr9 78821635 78821911 + 1.67641628704619 NA Intergenic CpG 206227 NM_153098 235505 Mm.32955 NM_153098 ENSMUSG00000046186 Cd109 9930012E15Rik|AI480638|GARP CD109 antigen protein-coding unique_peak2_19_70_0.541387108126094_6.42044067356773_1.67634034988185-2 chr5 117120124 117120747 + 1.67634034988185 NA intron (NM_001199685, intron 1 of 20) CpG 306 NM_001199685 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding unique_peak2_19_70_0.541387108126094_6.42044067356773_1.67634034988185 chr15 60108753 60109366 + 1.67634034988185 NA Intergenic Intergenic -92441 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_19_70_0.541387108126094_6.42044067356773_1.67634034988185 chr5 100636776 100637211 + 1.67634034988185 NA Intergenic Intergenic 37263 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding common_peak2_174_1618_-0.131335968900713_10.5952192858522_1.67620363763611 chr14 66228225 66233456 + 1.67620363763611 NA intron (NM_172498, intron 1 of 29) L1MA9|LINE|L1 -17288 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_35_267_-0.334791517398749_7.8986934317584_1.67539629437223-2 chr6 100824076 100824625 + 1.67539629437223 NA Intergenic B4A|SINE|B4 -9288 NM_182939 232314 Mm.27223 NM_182939 ENSMUSG00000052144 Ppp4r2 BE691708|C230060M08Rik protein phosphatase 4, regulatory subunit 2 protein-coding common_peak1_35_267_-0.334791517398749_7.8986934317584_1.67539629437223 chr2 11360175 11360828 + 1.67539629437223 NA intron (NR_040615, intron 1 of 2) intron (NR_040615, intron 1 of 2) 21012 NR_040369 100503147 Mm.91961 NR_040369 ENSMUSG00000086006 Gm13293 OTTMUSG00000011311 predicted gene 13293 ncRNA common_peak1_42_325_-0.303000983977126_8.19722766224251_1.67531782391538 chr18 80492598 80493126 + 1.67531782391538 NA Intergenic Intergenic -23195 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding common_peak1_194_1545_0.126724432561332_10.6576868202055_1.67495296357894 chr2 30236663 30238502 + 1.67495296357894 NA promoter-TSS (NR_028299) promoter-TSS (NR_028299) 49 NR_028299 67350 Mm.402683 NR_028299 1700084E18Rik - RIKEN cDNA 1700084E18 gene ncRNA common_peak1_47_367_-0.28317417677856_8.38197486766773_1.67456666176991-2 chr6 116072365 116073245 + 1.67456666176991 NA intron (NM_177412, intron 3 of 5) intron (NM_177412, intron 3 of 5) -77800 NM_026376 67784 Mm.3085 NM_026376 ENSMUSG00000030123 Plxnd1 6230425C21Rik|b2b1863Clo|b2b553Clo plexin D1 protein-coding common_peak1_47_367_-0.28317417677856_8.38197486766773_1.67456666176991 chr4 120815806 120816392 + 1.67456666176991 NA intron (NM_001048168, intron 1 of 9) intron (NM_001048168, intron 1 of 9) 9642 NM_001277095 18046 Mm.435590 NM_008692 ENSMUSG00000032897 Nfyc - nuclear transcription factor-Y gamma protein-coding common_peak1_12_92_-0.610349877653454_6.2339838722813_1.67443046860837 chr11 34739012 34739414 + 1.67443046860837 NA intron (NM_033374, intron 2 of 51) intron (NM_033374, intron 2 of 51) 44692 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding unique_peak2_12_92_-0.610349877653454_6.2339838722813_1.67443046860837 chr6 43747092 43747766 + 1.67443046860837 NA Intergenic L1MB3|LINE|L1 -81151 NM_013861 29807 Mm.320979 NM_013861 ENSMUSG00000029735 Tpk1 - thiamine pyrophosphokinase protein-coding unique_peak2_12_92_-0.610349877653454_6.2339838722813_1.67443046860837-3 chr7 142408297 142408968 + 1.67443046860837 NA Intergenic Intergenic -20762 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding unique_peak2_12_92_-0.610349877653454_6.2339838722813_1.67443046860837-2 chr7 19859741 19860549 + 1.67443046860837 NA intron (NM_001033419, intron 1 of 5) MIR3|SINE|MIR 1154 NM_001033419 330483 Mm.260192 NM_001033419 ENSMUSG00000014686 Ceacam16 Gm769 carcinoembryonic antigen-related cell adhesion molecule 16 protein-coding common_peak1_16_121_-0.527201076588715_6.66713679926853_1.67420020040381 chr15 76871387 76871767 + 1.67420020040381 NA promoter-TSS (NM_001007568) promoter-TSS (NM_001007568) -142 NM_001007568 71591 Mm.38195 NM_001007568 ENSMUSG00000022526 Zfp251 9130001M19Rik|AV339307 zinc finger protein 251 protein-coding unique_peak2_16_121_-0.527201076588715_6.66713679926853_1.67420020040381 chr1 170234840 170235759 + 1.67420020040381 NA intron (NM_001033499, intron 1 of 3) PB1D7|SINE|Alu 2428 NM_001033499 545378 Mm.379942 NM_001033499 ENSMUSG00000073494 Sh2d1b2 EAT-2B|Eat2b|Ert|Sh2d1c SH2 domain containing 1B2 protein-coding common_peak1_13_41_0.66763501605281_5.72613493080517_1.67365384124788-2 chr8 126587848 126588251 + 1.67365384124788 NA TTS (NM_001164598) TTS (NM_001164598) 5387 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_13_41_0.66763501605281_5.72613493080517_1.67365384124788 chr10 58350563 58350913 + 1.67365384124788 NA intron (NM_026148, intron 1 of 9) intron (NM_026148, intron 1 of 9) -20716 NM_201242 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding unique_peak1_13_41_0.66763501605281_5.72613493080517_1.67365384124788 chr10 60382208 60382616 + 1.67365384124788 NA intron (NR_045556, intron 33 of 68) RSINE1|SINE|B4 -17314 NM_001164374 100302688 Mm.444135 NM_001164374 ENSMUSG00000090439 Gm17455 - predicted gene, 17455 protein-coding common_peak2_101_667_0.190578795839761_9.47899369039393_1.67345824031028 chr4 139574630 139576182 + 1.67345824031028 NA exon (NM_001205173, exon 1 of 9) exon (NM_001205173, exon 1 of 9) 686 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak2_187_1760_-0.125823484032477_10.719267451815_1.67333473594643 chr2 69860448 69862787 + 1.67333473594643 NA promoter-TSS (NM_001110145) promoter-TSS (NM_001110145) 55 NM_009278 20823 Mm.10508 NM_009278 ENSMUSG00000068882 Ssb SS-B Sjogren syndrome antigen B protein-coding common_peak1_32_145_0.387495388780862_7.38357225327045_1.67284480416139-2 chr7 73531090 73531782 + 1.67284480416139 NA intron (NM_001081345, intron 2 of 38) B3|SINE|B2 10310 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak1_32_145_0.387495388780862_7.38357225327045_1.67284480416139 chr4 7454921 7455612 + 1.67284480416139 NA Intergenic Intergenic -105422 NR_040645 71510 Mm.410775 NR_040645 ENSMUSG00000086070 8430436N08Rik - RIKEN cDNA 8430436N08 gene ncRNA common_peak1_81_672_-0.206407118358534_9.29125913543105_1.67271757022959 chr6 6577734 6578810 + 1.67271757022959 NA intron (NM_009169, intron 1 of 2) intron (NM_009169, intron 1 of 2) 386 NM_009169 20422 Mm.2469 NM_009169 ENSMUSG00000042541 Shfm1 DSS1|Shfdg1|Shfg split hand/foot malformation (ectrodactyly) type 1 protein-coding common_peak2_65_375_0.249343407169599_8.67926055526244_1.67224065140547 chr8 45974804 45976105 + 1.67224065140547 NA promoter-TSS (NM_001033148) promoter-TSS (NM_001033148) -74 NM_138668 192169 Mm.210882 NM_138668 ENSMUSG00000031634 Ufsp2 1810047C23Rik UFM1-specific peptidase 2 protein-coding common_peak2_156_1425_-0.14028263203824_10.4076169504248_1.6720880410599 chr11 117831260 117833716 + 1.6720880410599 NA intron (NM_027827, intron 3 of 10) intron (NM_027827, intron 3 of 10) -6474 NM_009387 21877 Mm.2661 NM_009387 ENSMUSG00000025574 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 protein-coding common_peak2_154_1404_-0.141566623495661_10.3855711033605_1.6719153711287 chr14 75067956 75070506 + 1.6719153711287 NA intron (NR_030568, intron 2 of 3) intron (NR_030568, intron 2 of 3) 53204 NM_198642 271221 Mm.320280 NM_198642 ENSMUSG00000034959 Rubcnl 5031414D18Rik|Gm744|Gm911|Kiaa0226l RUN and cysteine rich domain containing beclin 1 interacting protein like protein-coding common_peak1_259_2231_0.106017830876421_11.1771302272674_1.67185773557755 chr9 107770091 107771822 + 1.67185773557755 NA promoter-TSS (NM_148930) promoter-TSS (NM_148930) 46 NM_148930 83486 Mm.259197 NM_148930 ENSMUSG00000032580 Rbm5 D030069N10Rik RNA binding motif protein 5 protein-coding common_peak1_118_1032_-0.165552168625416_9.92984845455235_1.671697402049 chr7 45052448 45054254 + 1.671697402049 NA promoter-TSS (NM_175022) promoter-TSS (NM_175022) -470 NM_175022 233210 Mm.219137 NM_175022 ENSMUSG00000046574 Prr12 6720469B10|BC058674 proline rich 12 protein-coding common_peak1_115_790_0.17435405241249_9.71471091067904_1.67070041775322 chr4 101647679 101648740 + 1.67070041775322 NA intron (NM_175036, intron 1 of 3) intron (NM_175036, intron 1 of 3) 426 NM_175036 230514 Mm.4756 NM_175036 ENSMUSG00000035212 Leprot LEPR|OB-RGRP|Obrgrp|VPS55 leptin receptor overlapping transcript protein-coding common_peak1_89_748_-0.196030959707763_9.45080642860487_1.67061141309658 chr15 79327361 79328844 + 1.67061141309658 NA 5' UTR (NM_001199024, exon 1 of 16) 5' UTR (NM_001199024, exon 1 of 16) 269 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak1_58_323_0.265676402157201_8.47268820396322_1.67019357298324 chr11 32267027 32267643 + 1.67019357298324 NA intron (NR_104306, intron 1 of 13) intron (NR_104306, intron 1 of 13) 372 NM_181569 17168 Mm.263161 NM_181569 ENSMUSG00000020289 Nprl3 Aag|CGTHBA|HS-26|HS-40|Mare|Phg|Prox1|m(alpha)RE nitrogen permease regulator-like 3 protein-coding common_peak2_75_616_-0.215537853379814_9.16135775245951_1.67010407704204 chr6 90744226 90747322 + 1.67010407704204 NA intron (NM_001134384, intron 1 of 13) intron (NM_001134384, intron 1 of 13) -29245 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak2_55_436_-0.258312408296318_8.64233326535244_1.66941598675525 chr7 30558939 30560444 + 1.66941598675525 NA promoter-TSS (NM_029377) promoter-TSS (NM_029377) -45 NM_001290569 75660 Mm.379242 NM_029377 ENSMUSG00000036845 Lin37 1810054G18Rik lin-37 homolog (C. elegans) protein-coding common_peak1_179_1672_-0.12881847010101_10.6438124949878_1.66892296920384 chr3 22076664 22077941 + 1.66892296920384 NA intron (NM_030732, intron 1 of 15) intron (NM_030732, intron 1 of 15) 650 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_163_1237_0.140872288223875_10.3442317433262_1.66889191293579 chr3 104783081 104785374 + 1.66889191293579 NA intron (NM_027982, intron 5 of 9) intron (NM_027982, intron 5 of 9) 3171 NM_027982 71887 Mm.379204 NM_027982 ENSMUSG00000002228 Ppm1j 2310008J22Rik|PP2Czeta|Ppp2cz protein phosphatase 1J protein-coding common_peak1_34_259_-0.340922098504921_7.85190676377599_1.66878541976041 chrX 36807530 36807990 + 1.66878541976041 NA Intergenic Intergenic 9440 NR_131979 69591 Mm.482947 NR_131979 ENSMUSG00000097468 Mdrl 2310010G23Rik mitochondrial dynamic related lncRNA ncRNA common_peak1_88_558_0.206313895920998_9.22986142080369_1.66846403651706 chr16 10975043 10976213 + 1.66846403651706 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 17493 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak1_45_230_0.313324073863808_8.00841107834796_1.66843362107625 chr1 43143618 43144404 + 1.66843362107625 NA intron (NM_001289533, intron 2 of 5) RLTR23|LTR|ERV1 19950 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_45_230_0.313324073863808_8.00841107834796_1.66843362107625-2 chr6 108465596 108466940 + 1.66843362107625 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -23475 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_45_230_0.313324073863808_8.00841107834796_1.66843362107625 chr16 35363152 35364350 + 1.66843362107625 NA intron (NM_133704, intron 1 of 6) CpG 167 NM_133704 317717 Mm.259164 NM_133704 ENSMUSG00000034473 Sec22a 1810005C06Rik|Sec22l2 SEC22 homolog A, vesicle trafficking protein protein-coding common_peak2_312_3214_-0.0921598262210956_11.6045231091048_1.66771926544001 chr6 120362424 120365559 + 1.66771926544001 NA promoter-TSS (NM_145997) promoter-TSS (NM_145997) -108 NM_145997 214899 Mm.404761 NM_145997 ENSMUSG00000030180 Kdm5a AA409370|C76986|Jarid1a|RBP2|Rbbp2 lysine (K)-specific demethylase 5A protein-coding common_peak2_254_2521_-0.104576196322443_11.248064462167_1.66769692616376 chr8 71721989 71725985 + 1.66769692616376 NA intron (NR_131256, intron 1 of 25) intron (NR_131256, intron 1 of 25) 1694 NR_131256 74015 Mm.22025 NM_028715 ENSMUSG00000070000 Fcho1 3322402E17Rik|N28152 FCH domain only 1 protein-coding common_peak1_77_469_0.223038814229218_8.98803635367961_1.66760791331787 chr11 61174182 61175079 + 1.66760791331787 NA intron (NM_001004143, intron 1 of 12) CpG 429 NM_001004143 216825 Mm.30602 NM_001004143 ENSMUSG00000042506 Usp22 AI427806 ubiquitin specific peptidase 22 protein-coding common_peak2_117_808_0.172142823798204_9.74606730432908_1.66736591810815 chr3 32707955 32709814 + 1.66736591810815 NA intron (NM_019673, intron 1 of 13) CpG 338 NM_019673 56456 Mm.41077 NM_019673 ENSMUSG00000027671 Actl6a 2810432C06Rik|AI851094|ARP4|Actl6|Baf53a|C79802 actin-like 6A protein-coding common_peak1_51_402_-0.272602472700679_8.51833479217763_1.66722870697435 chr13 69534090 69534726 + 1.66722870697435 NA promoter-TSS (NM_001169131) promoter-TSS (NM_001169131) -544 NM_001169131 210106 Mm.315959 NM_198600 ENSMUSG00000034575 Papd7 LAK-1|POLK|Pols|TRF4|TRF4-1 PAP associated domain containing 7 protein-coding unique_peak2_31_139_0.393582557366558_7.32607429562825_1.66684055125761 chr14 74942714 74944000 + 1.66684055125761 NA intron (NM_001252132, intron 1 of 18) intron (NM_001252132, intron 1 of 18) 4520 NM_001252132 380916 Mm.288868 NM_001033439 ENSMUSG00000068015 Lrch1 4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding common_peak1_31_139_0.393582557366558_7.32607429562825_1.66684055125761-2 chr6 130106671 130107453 + 1.66684055125761 NA intron (NM_013793, intron 3 of 7) (T)n|Simple_repeat|Simple_repeat 22773 NM_010650 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding common_peak1_31_139_0.393582557366558_7.32607429562825_1.66684055125761 chr5 115068030 115068719 + 1.66684055125761 NA intron (NM_029012, intron 2 of 10) intron (NM_029012, intron 2 of 10) 39588 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt Gm13826|OTTMUSG00000014624 ribosomal protein L37, retrotransposed protein-coding unique_peak2_31_139_0.393582557366558_7.32607429562825_1.66684055125761-2 chr2 131992689 131993617 + 1.66684055125761 NA 3' UTR (NM_175445, exon 11 of 11) 3' UTR (NM_175445, exon 11 of 11) 36835 NM_175445 215653 Mm.204737 NM_175445 ENSMUSG00000027339 Rassf2 3830431H01Rik|9030412M04Rik|AI852669|AW495050 Ras association (RalGDS/AF-6) domain family member 2 protein-coding common_peak1_41_317_-0.3087960002995_8.1584849551346_1.66542008952215 chr6 31209872 31210480 + 1.66542008952215 NA intron (NR_110469, intron 1 of 3) intron (NR_110469, intron 1 of 3) 8298 NR_110470 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak2_85_533_0.21164354975275_9.16651770656393_1.66533752306692 chr5 107597217 107598507 + 1.66533752306692 NA promoter-TSS (NM_133248) promoter-TSS (NM_133248) 26 NM_001161738 170823 Mm.41417 NM_133248 ENSMUSG00000029276 Glmn 9330160J16Rik|AW227515|Fap48|Fap68 glomulin, FKBP associated protein protein-coding common_peak2_101_863_-0.180604413849656_9.66458529523864_1.66505917593338 chr11 6267009 6268533 + 1.66505917593338 NA promoter-TSS (NM_026538) promoter-TSS (NM_026538) -42 NM_026538 52513 Mm.29810 NM_026538 ENSMUSG00000004393 Ddx56 2600001H07Rik|D11Ertd619e|Noh61 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 protein-coding common_peak2_61_345_0.258666288283937_8.56396137177869_1.66501782428786 chr2 91984157 91985719 + 1.66501782428786 NA intron (NM_011957, intron 10 of 11) C-rich|Low_complexity|Low_complexity -21375 NM_138306 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak1_17_128_-0.506541893550587_6.75795630864796_1.66498071223652 chr15 44620283 44620694 + 1.66498071223652 NA intron (NM_019480, intron 1 of 6) intron (NM_019480, intron 1 of 6) 847 NM_019480 55960 Mm.287896 NM_019480 ENSMUSG00000022339 Ebag9 AI835379|Rcas1 estrogen receptor-binding fragment-associated gene 9 protein-coding common_peak2_17_128_-0.506541893550587_6.75795630864796_1.66498071223652 chr1 193159842 193160719 + 1.66498071223652 NA intron (NM_016851, intron 2 of 7) intron (NM_016851, intron 2 of 7) 7168 NM_016851 54139 Mm.273695 NM_016851 ENSMUSG00000026638 Irf6 AI876454|E230028I05Rik|mirf6 interferon regulatory factor 6 protein-coding common_peak2_180_1405_0.131826436403827_10.5232940972744_1.66483962110004 chr2 156110707 156112522 + 1.66483962110004 NA intron (NM_029397, intron 1 of 2) CpG 351 NM_170598 75710 Mm.27660 NM_029397 ENSMUSG00000089824 Rbm12 5730420G12Rik|9430070C08Rik|AI852903|SWAN|mKIAA0765 RNA binding motif protein 12 protein-coding common_peak2_91_767_-0.193277074254933_9.48832396359369_1.66390692239683 chr5 107702039 107704383 + 1.66390692239683 NA intron (NR_045871, intron 1 of 2) intron (NR_045871, intron 1 of 2) 269 NR_045871 654809 Mm.399159 NR_045871 ENSMUSG00000106333 4930428O21Rik - RIKEN cDNA 4930428O21 gene ncRNA common_peak2_39_190_0.340317710781384_7.74758768342644_1.66351224676363 chr3 153723887 153725311 + 1.66351224676363 NA intron (NM_011372, intron 1 of 4) intron (NM_011372, intron 1 of 4) 534 NM_011372 20447 Mm.296453 NM_011372 ENSMUSG00000052544 St6galnac3 Siat7c ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding common_peak1_46_359_-0.288722008903656_8.34749209187785_1.66320150901143 chr1 71102956 71103810 + 1.66320150901143 NA promoter-TSS (NM_007525) promoter-TSS (NM_007525) -411 NM_007525 12021 Mm.10764 NM_007525 ENSMUSG00000026196 Bard1 ENSMUSG00000060893|ENSMUSG00000073653 BRCA1 associated RING domain 1 protein-coding common_peak2_176_1365_0.133919152905019_10.4827013447426_1.66294329319169 chr4 152008104 152010943 + 1.66294329319169 NA exon (NM_001033352, exon 1 of 4) exon (NM_001033352, exon 1 of 4) 632 NM_001033352 242785 Mm.22306 NM_001033352 ENSMUSG00000073700 Klhl21 1810045K06Rik|D330008A20|mKIAA0469 kelch-like 21 protein-coding common_peak1_134_962_0.158921165874457_9.99085257078069_1.66292346073187 chr18 80685526 80687206 + 1.66292346073187 NA intron (NM_198429, intron 2 of 9) intron (NM_198429, intron 2 of 9) 21807 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_202_1627_0.123314439511791_10.7305422040221_1.66283415822998 chr3 100684672 100686653 + 1.66283415822998 NA promoter-TSS (NM_010763) promoter-TSS (NM_010763) -189 NM_010763 17156 Mm.271617 NM_010763 ENSMUSG00000008763 Man1a2 AI428775|AI528764|AI854422|Man1b|PCR2 mannosidase, alpha, class 1A, member 2 protein-coding common_peak1_33_251_-0.34713135133939_7.80371424783022_1.66270270182317 chr4 119294673 119295057 + 1.66270270182317 NA promoter-TSS (NM_011732) promoter-TSS (NM_011732) -352 NM_011732 22608 Mm.258204 NM_011732 ENSMUSG00000028639 Ybx1 1700102N10Rik|C79409|EF1A|MSY1|Nsep1|YB-1|dbpB|mYB-1a Y box protein 1 protein-coding common_peak1_33_251_-0.34713135133939_7.80371424783022_1.66270270182317-2 chr9 21167834 21168766 + 1.66270270182317 NA TTS (NR_106127) TTS (NR_106127) 2586 NM_183408 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding common_peak1_30_133_0.400593014276534_7.26638569759604_1.66173995753575 chr17 34941434 34941990 + 1.66173995753575 NA Intergenic Intergenic 9296 NR_028527 100217427 NR_028527 ENSMUSG00000093009 Snord52 MBII-297 small nucleolar RNA, C/D box 52 snoRNA common_peak2_30_133_0.400593014276534_7.26638569759604_1.66173995753575 chr15 75684291 75685132 + 1.66173995753575 NA Intergenic MTC|LTR|ERVL-MaLR -5921 NM_028404 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding common_peak1_30_133_0.400593014276534_7.26638569759604_1.66173995753575-2 chr6 134916810 134917343 + 1.66173995753575 NA Intergenic Intergenic -3325 NM_009875 12576 Mm.2958 NM_009875 ENSMUSG00000003031 Cdkn1b AA408329|AI843786|Kip1|p27|p27Kip1 cyclin-dependent kinase inhibitor 1B protein-coding common_peak2_30_133_0.400593014276534_7.26638569759604_1.66173995753575-2 chr7 4995538 4996663 + 1.66173995753575 NA promoter-TSS (NM_026741) promoter-TSS (NM_026741) 1 NM_026741 68490 Mm.76400 NM_026741 ENSMUSG00000051550 Zfp579 1110003A17Rik|Znf579 zinc finger protein 579 protein-coding common_peak2_49_258_0.295819215636186_8.16471789550465_1.66066533990995 chr16 32658870 32660031 + 1.66066533990995 NA intron (NM_016788, intron 1 of 15) intron (NM_016788, intron 1 of 15) 8747 NR_033493 675921 Mm.404316 NR_033493 ENSMUSG00000075265 Tnk2os ENSMUSG00000075265|Gm10818 tyrosine kinase, non-receptor 2, opposite strand ncRNA common_peak1_40_308_-0.310019762838949_8.1164531464849_1.66065197770968 chr3 89088970 89089962 + 1.66065197770968 NA intron (NM_001083807, intron 4 of 9) intron (NM_001083807, intron 4 of 9) 565 NM_001083808 72296 Mm.27687 NM_028188 ENSMUSG00000041263 Rusc1 2210403N08Rik|AA408288|NESCA RUN and SH3 domain containing 1 protein-coding common_peak1_40_308_-0.310019762838949_8.1164531464849_1.66065197770968-2 chr4 11146742 11147405 + 1.66065197770968 NA Intergenic Intergenic -9368 NM_001199105 60599 Mm.393018 NM_021897 ENSMUSG00000028211 Trp53inp1 2700057G22Rik|SIP|SIP18|SIP27|Stinp|Teap transformation related protein 53 inducible nuclear protein 1 protein-coding common_peak1_44_223_0.318823715507028_7.96676677981112_1.66037898525644 chr13 113610130 113611062 + 1.66037898525644 NA intron (NM_130796, intron 1 of 1) MTEa|LTR|ERVL-MaLR 7968 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak1_44_223_0.318823715507028_7.96676677981112_1.66037898525644-2 chr9 75540956 75541609 + 1.66037898525644 NA intron (NM_016963, intron 1 of 9) RSINE1|SINE|B4 18375 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak1_239_2016_0.11049799754381_11.0332443673849_1.66016927959457 chr18 61555201 61557056 + 1.66016927959457 NA intron (NM_146087, intron 1 of 9) intron (NM_146087, intron 1 of 9) 546 NM_146087 93687 Mm.26908 NM_146087 ENSMUSG00000024576 Csnk1a1 2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a casein kinase 1, alpha 1 protein-coding common_peak1_54_427_-0.260175968015231_8.61137900239353_1.66000923936361 chr9 118272438 118273443 + 1.66000923936361 NA Intergenic Intergenic -122744 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding common_peak2_123_862_0.166690077928063_9.83656178814299_1.65959674310105 chr2 119287830 119289902 + 1.65959674310105 NA 5' UTR (NM_172269, exon 1 of 5) 5' UTR (NM_172269, exon 1 of 5) 124 NM_172269 228545 Mm.294761 NM_172269 ENSMUSG00000034216 Vps18 9930024E13Rik VPS18 CORVET/HOPS core subunit protein-coding common_peak2_71_579_-0.221999105769555_9.06890953713016_1.65931497728095 chr16 93603230 93604785 + 1.65931497728095 NA promoter-TSS (NM_145482) promoter-TSS (NM_145482) -192 NM_145482 224440 Mm.10628 NM_145482 ENSMUSG00000022948 Setd4 AY037804|C21orf18|ORF21 SET domain containing 4 protein-coding common_peak1_58_463_-0.252454590085748_8.7317537000847_1.65928829278969 chr1 133688317 133689159 + 1.65928829278969 NA intron (NM_172842, intron 2 of 5) intron (NM_172842, intron 2 of 5) 1278 NM_172842 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding common_peak1_95_617_0.195537062560433_9.36923155918459_1.65922819181069 chr14 79397361 79398526 + 1.65922819181069 NA 5' UTR (NM_145960, exon 1 of 11) 5' UTR (NM_145960, exon 1 of 11) 171 NM_145960 211253 Mm.35306 NM_145960 ENSMUSG00000022022 Mtrf1 A830062K05Rik|MtRF-1 mitochondrial translational release factor 1 protein-coding common_peak1_38_183_0.349381493550847_7.69825270283244_1.65886331812932 chr6 120473391 120474058 + 1.65886331812932 NA intron (NM_008359, intron 3 of 12) intron (NM_008359, intron 3 of 12) 10527 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak2_50_393_-0.274381042328919_8.48486129829192_1.65873461246467 chr5 121340262 121342051 + 1.65873461246467 NA intron (NM_181421, intron 55 of 75) URR1A|DNA|hAT-Charlie 44459 NM_001163470 231712 Mm.20488 NM_172275 ENSMUSG00000042726 Trafd1 1110008K06Rik|Fln29 TRAF type zinc finger domain containing 1 protein-coding common_peak1_18_135_-0.487098637853449_6.84391352232361_1.6586934656705-4 chr8 13338871 13339262 + 1.6586934656705 NA intron (NM_009361, intron 1 of 11) CpG 262 NM_009361 21781 Mm.925 NM_009361 ENSMUSG00000038482 Tfdp1 Dp1|Drtf1 transcription factor Dp 1 protein-coding common_peak1_18_135_-0.487098637853449_6.84391352232361_1.6586934656705-2 chr11 11656522 11656907 + 1.6586934656705 NA Intergenic Intergenic -28876 NM_001305143 102631730 Mm.159430 NM_001305143 ENSMUSG00000062511 4930512M02Rik - RIKEN cDNA 4930512M02 gene protein-coding common_peak1_18_135_-0.487098637853449_6.84391352232361_1.6586934656705-3 chr11 21568674 21569053 + 1.6586934656705 NA intron (NM_001316675, intron 1 of 8) intron (NM_001316675, intron 1 of 8) 3071 NM_008618 17449 Mm.212703 NM_008618 ENSMUSG00000020321 Mdh1 B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2 malate dehydrogenase 1, NAD (soluble) protein-coding unique_peak2_18_135_-0.487098637853449_6.84391352232361_1.6586934656705-3 chr2 11355320 11356355 + 1.6586934656705 NA intron (NR_040615, intron 1 of 2) intron (NR_040615, intron 1 of 2) 16348 NR_040369 100503147 Mm.91961 NR_040369 ENSMUSG00000086006 Gm13293 OTTMUSG00000011311 predicted gene 13293 ncRNA unique_peak2_18_135_-0.487098637853449_6.84391352232361_1.6586934656705-2 chr16 94240616 94241374 + 1.6586934656705 NA intron (NM_139145, intron 4 of 9) intron (NM_139145, intron 4 of 9) 46861 NM_139145 110948 Mm.30921 NM_139145 ENSMUSG00000040820 Hlcs 410I21.SP6|D16Jhu34 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) protein-coding common_peak1_18_135_-0.487098637853449_6.84391352232361_1.6586934656705 chr10 120208354 120208744 + 1.6586934656705 NA promoter-TSS (NM_026617) promoter-TSS (NM_026617) -277 NM_026617 68212 Mm.157426 NM_026617 ENSMUSG00000020225 Tmbim4 0610007H07Rik|AU022431 transmembrane BAX inhibitor motif containing 4 protein-coding unique_peak2_18_135_-0.487098637853449_6.84391352232361_1.6586934656705 chr10 59894924 59895679 + 1.6586934656705 NA intron (NM_019965, intron 6 of 8) intron (NM_019965, intron 6 of 8) 15710 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_21_81_0.502245738075867_6.60867487365602_1.65850586712761-2 chr2 165850083 165850666 + 1.65850586712761 NA intron (NM_001291158, intron 4 of 23) B1_Mus1|SINE|Alu 7799 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_21_81_0.502245738075867_6.60867487365602_1.65850586712761 chr11 118410819 118411259 + 1.65850586712761 NA exon (NM_001267592, exon 3 of 6) exon (NM_001267592, exon 3 of 6) 4761 NM_001267591 76025 Mm.177551 NM_029502 ENSMUSG00000025575 Cant1 5830420C20Rik|Apy1h|D11Bwg0554e|Entpd8|SCAN-1|Shapy calcium activated nucleotidase 1 protein-coding common_peak1_21_81_0.502245738075867_6.60867487365602_1.65850586712761-3 chr3 60487919 60488526 + 1.65850586712761 NA intron (NM_001253713, intron 2 of 9) intron (NM_001253713, intron 2 of 9) -12957 NM_001253711 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding unique_peak2_21_81_0.502245738075867_6.60867487365602_1.65850586712761 chr11 23943464 23944384 + 1.65850586712761 NA Intergenic RLTR19|LTR|ERVK -48654 NM_172555 216578 Mm.470599 NM_172555 ENSMUSG00000020273 Papolg 9630006B20Rik poly(A) polymerase gamma protein-coding common_peak2_20_76_0.510688103103597_6.5221305922467_1.65822994537691 chr12 4768921 4769459 + 1.65822994537691 NA promoter-TSS (NM_175431) promoter-TSS (NM_175431) 77 NM_175431 207921 Mm.184898 NM_175431 ENSMUSG00000050545 Fam228b A830093I24Rik family with sequence similarity 228, member B protein-coding unique_peak2_20_76_0.510688103103597_6.5221305922467_1.65822994537691-2 chr2 101827672 101828240 + 1.65822994537691 NA intron (NM_001110849, intron 2 of 9) intron (NM_001110849, intron 2 of 9) 11024 NM_001110849 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_20_76_0.510688103103597_6.5221305922467_1.65822994537691 chr11 86811552 86812085 + 1.65822994537691 NA intron (NR_106195, intron 2 of 8) RLTR6C_Mm|LTR|ERV1 -4158 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding unique_peak2_20_76_0.510688103103597_6.5221305922467_1.65822994537691 chr11 19992980 19993643 + 1.65822994537691 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 68869 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_93_786_-0.190476426895112_9.52498161205993_1.65783374053512 chr1 156673481 156674857 + 1.65783374053512 NA exon (NM_023141, exon 1 of 6) exon (NM_023141, exon 1 of 6) 170 NM_023141 30935 Mm.206737 NM_023141 ENSMUSG00000060519 Tor3a Adir torsin family 3, member A protein-coding common_peak1_29_127_0.408656432597703_7.20432821629885_1.65766245636741-4 chr7 36151383 36152120 + 1.65766245636741 NA Intergenic Intergenic -348762 NM_177739 668501 Mm.286296 NM_177739 ENSMUSG00000044452 Zfp507 1810022O10Rik|A230056M16Rik|AL024009|AU021817|BB105092|Gm480|Znf507|mKIAA1084 zinc finger protein 507 protein-coding common_peak1_29_127_0.408656432597703_7.20432821629885_1.65766245636741 chr14 25543148 25543894 + 1.65766245636741 NA intron (NM_001310666, intron 3 of 23) intron (NM_001310666, intron 3 of 23) 9082 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_29_127_0.408656432597703_7.20432821629885_1.65766245636741-2 chr14 60784501 60785163 + 1.65766245636741 NA exon (NM_027436, exon 1 of 19) exon (NM_027436, exon 1 of 19) 266 NR_040642 70478 Mm.274650 NM_027436 ENSMUSG00000021993 Mipep 5730405E07Rik|MIP mitochondrial intermediate peptidase protein-coding common_peak1_29_127_0.408656432597703_7.20432821629885_1.65766245636741-3 chr17 52158538 52159310 + 1.65766245636741 NA Intergenic Intergenic 276197 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA common_peak1_432_4731_-0.0754859206581013_12.1704913980107_1.65747039269652 chr15 76197527 76200621 + 1.65747039269652 NA promoter-TSS (NM_201393) promoter-TSS (NM_201393) 332 NM_201392 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_32_243_-0.353417389902007_7.75402864261188_1.65720313410806 chr9 122128735 122129359 + 1.65720313410806 NA intron (NM_001164572, intron 1 of 5) intron (NM_001164572, intron 1 of 5) 11781 NM_133741 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak1_172_1595_-0.131034404729796_10.5747277338574_1.65645671192778 chr17 34197671 34199206 + 1.65645671192778 NA exon (NM_010724, exon 1 of 6) exon (NM_010724, exon 1 of 6) 243 NM_010724 16913 Mm.180191 NM_010724 ENSMUSG00000024338 Psmb8 Lmp-7|Lmp7 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) protein-coding common_peak1_562_5922_0.0652374328626699_12.5647310872263_1.656188810508 chr8 124315562 124320695 + 1.656188810508 NA intron (NM_139272, intron 3 of 15) L1MB1|LINE|L1 86734 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_105_902_-0.17622810085139_9.73046812705516_1.65618869982718 chr16 50528663 50530083 + 1.65618869982718 NA intron (NR_040379, intron 1 of 5) CpG 871 NR_040379 619312 Mm.427671 NR_040379 G730013B05Rik linc-Cblb|linc1610 RIKEN cDNA G730013B05 gene ncRNA common_peak2_225_2185_-0.111945876313147_11.0381047475153_1.65564518857504 chr3 106460572 106465683 + 1.65564518857504 NA Intergenic Intergenic -19304 NM_001093754 72121 Mm.14816 NM_028110 ENSMUSG00000027901 Dennd2d 2010308M01Rik|AI451421 DENN/MADD domain containing 2D protein-coding common_peak1_19_142_-0.468737109147613_6.92550278220458_1.65486731105564-2 chr9 35267917 35268365 + 1.65486731105564 NA promoter-TSS (NM_175411) promoter-TSS (NM_175411) 260 NM_028040 71989 Mm.273515 NM_028040 ENSMUSG00000032044 Rpusd4 2410001E19Rik RNA pseudouridylate synthase domain containing 4 protein-coding common_peak1_19_142_-0.468737109147613_6.92550278220458_1.65486731105564-3 chrX 73921653 73922138 + 1.65486731105564 NA promoter-TSS (NM_019870) promoter-TSS (NM_019870) 49 NM_001310538 56292 Mm.246654 NM_019870 ENSMUSG00000031388 Naa10 2310039H09Rik|Ard1|Ard1a|Te2 N(alpha)-acetyltransferase 10, NatA catalytic subunit protein-coding common_peak1_19_142_-0.468737109147613_6.92550278220458_1.65486731105564 chr8 105808047 105808582 + 1.65486731105564 NA intron (NM_145824, intron 2 of 13) intron (NM_145824, intron 2 of 13) 19036 NM_145824 74334 Mm.4206 NM_145824 ENSMUSG00000037415 Ranbp10 4432417N03Rik RAN binding protein 10 protein-coding unique_peak2_19_142_-0.468737109147613_6.92550278220458_1.65486731105564 chr3 35746550 35747848 + 1.65486731105564 NA Intergenic Intergenic -6939 NM_029570 76295 Mm.239416 NM_029570 ENSMUSG00000037400 Atp11b 1110019I14Rik|ATPIF|ATPIR|mKIAA0956 ATPase, class VI, type 11B protein-coding common_peak1_28_121_0.417925976949681_7.13970032603773_1.65474951701149 chr4 84884227 84884796 + 1.65474951701149 NA exon (NM_177385, exon 1 of 5) exon (NM_177385, exon 1 of 5) 202 NM_177385 338349 Mm.440562 NM_175275 ENSMUSG00000038070 Cntln AI448092|B430108F07Rik|D530005L17Rik centlein, centrosomal protein protein-coding unique_peak2_28_121_0.417925976949681_7.13970032603773_1.65474951701149 chr17 78881960 78882825 + 1.65474951701149 NA intron (NM_011163, intron 1 of 15) intron (NM_011163, intron 1 of 15) 180 NM_011163 19106 Mm.378990 NM_011163 ENSMUSG00000024079 Eif2ak2 2310047A08Rik|4732414G15Rik|AI467567|AI747578|Pkr|Prkr|Tik eukaryotic translation initiation factor 2-alpha kinase 2 protein-coding common_peak2_28_121_0.417925976949681_7.13970032603773_1.65474951701149 chr11 83038605 83039430 + 1.65474951701149 NA intron (NR_073524, intron 1 of 4) intron (NR_073524, intron 1 of 4) 1025 NR_073523 237887 Mm.341645 NM_181542 ENSMUSG00000072621 Slfn10-ps Slfn10|mFLJ00257 schlafen 10, pseudogene pseudo common_peak1_28_121_0.417925976949681_7.13970032603773_1.65474951701149-2 chr5 112289787 112290416 + 1.65474951701149 NA intron (NM_009419, intron 1 of 6) intron (NM_009419, intron 1 of 6) 13394 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak1_100_853_-0.181244066015033_9.64747022661297_1.65400494312699 chr13 74563378 74564822 + 1.65400494312699 NA Intergenic Intergenic -70150 NM_146231 235956 Mm.296909 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak2_27_115_0.428583754890353_7.07227287257275_1.65316997760033-2 chr2 125624604 125625190 + 1.65316997760033 NA 5' UTR (NM_001081091, exon 1 of 28) 5' UTR (NM_001081091, exon 1 of 28) 216 NM_001081091 99100 Mm.330545 NM_001081091 ENSMUSG00000068394 Cep152 AI851464|mKIAA0912 centrosomal protein 152 protein-coding common_peak2_27_115_0.428583754890353_7.07227287257275_1.65316997760033 chr16 31233492 31234211 + 1.65316997760033 NA intron (NR_035427, intron 1 of 2) intron (NR_035427, intron 1 of 2) -32613 NM_030138 78618 Mm.274646 NM_030138 ENSMUSG00000049076 Acap2 4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding common_peak2_26_109_0.440847853314935_7.00178364018213_1.65312700741454 chr2 163658296 163658966 + 1.65312700741454 NA 5' UTR (NM_001164053, exon 1 of 4) 5' UTR (NM_001164053, exon 1 of 4) 173 NM_001164053 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak1_26_109_0.440847853314935_7.00178364018213_1.65312700741454-2 chr7 73524538 73525139 + 1.65312700741454 NA intron (NM_001081345, intron 2 of 38) intron (NM_001081345, intron 2 of 38) 16908 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak2_26_109_0.440847853314935_7.00178364018213_1.65312700741454-2 chrX 153723295 153724123 + 1.65312700741454 NA 5' UTR (NM_027327, exon 1 of 4) 5' UTR (NM_027327, exon 1 of 4) 155 NM_027327 70123 Mm.146408 NM_027327 ENSMUSG00000086316 2210013O21Rik AI181827|Thp5 RIKEN cDNA 2210013O21 gene protein-coding common_peak1_26_109_0.440847853314935_7.00178364018213_1.65312700741454 chr1 74381023 74381545 + 1.65312700741454 NA intron (NM_013612, intron 8 of 14) intron (NM_013612, intron 8 of 14) 6081 NM_013612 18173 Mm.2913 NM_013612 ENSMUSG00000026177 Slc11a1 Bcg|Ity|Ity1|Lsh|Nramp|Nramp1|ity solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 protein-coding common_peak2_219_1804_0.116732518984094_10.8761493812666_1.65295840244666 chr11 62601993 62604353 + 1.65295840244666 NA promoter-TSS (NR_028550) promoter-TSS (NR_028550) 87 NR_028526 100217426 NR_028526 ENSMUSG00000064437 Snord49b MBII-252|MBII-366 small nucleolar RNA, C/D box 49B snoRNA common_peak1_23_92_0.474616656984064_6.77646713960006_1.65251929738858-2 chr13 43478194 43478891 + 1.65251929738858 NA intron (NM_019930, intron 1 of 13) intron (NM_019930, intron 1 of 13) 2431 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak1_23_92_0.474616656984064_6.77646713960006_1.65251929738858 chr11 117335704 117336146 + 1.65251929738858 NA intron (NM_001113488, intron 1 of 9) intron (NM_001113488, intron 1 of 9) 3612 NM_001113488 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_148_1339_-0.143092283237515_10.3164711437264_1.65245303501106 chr17 31295328 31297093 + 1.65245303501106 NA promoter-TSS (NM_001242427) promoter-TSS (NM_001242427) -14 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak2_95_805_-0.18763593806316_9.56081805949639_1.65234547667737 chr6 128992086 128994050 + 1.65234547667737 NA promoter-TSS (NR_015455) promoter-TSS (NR_015455) 48 NR_015455 408064 Mm.172429 NR_015455 BC064078 - cDNA sequence BC064078 ncRNA common_peak2_226_1878_0.114195395567677_10.9328470492039_1.65223058718593 chr6 37870028 37872356 + 1.65223058718593 NA exon (NM_001272064, exon 1 of 19) exon (NM_001272064, exon 1 of 19) 381 NM_145076 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak1_329_3021_0.0907499005607288_11.6066628954452_1.65199460335548 chr3 152209264 152211574 + 1.65199460335548 NA promoter-TSS (NM_057172) promoter-TSS (NM_057172) -39 NM_057172 51886 Mm.278922 NM_057172 ENSMUSG00000028034 Fubp1 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4 far upstream element (FUSE) binding protein 1 protein-coding unique_peak2_39_300_-0.315873137942569_8.07568310778842_1.65136932489908 chr11 121705501 121707202 + 1.65136932489908 NA intron (NM_144797, intron 1 of 3) intron (NM_144797, intron 1 of 3) 3924 NM_144797 210029 Mm.153566 NM_144797 ENSMUSG00000039208 Metrnl 9430048M07Rik|BC019776 meteorin, glial cell differentiation regulator-like protein-coding common_peak1_39_300_-0.315873137942569_8.07568310778842_1.65136932489908 chr10 81384379 81385062 + 1.65136932489908 NA intron (NM_133964, intron 1 of 4) ID_B1|SINE|B4 292 NM_133964 102115 Mm.294975 NM_133964 ENSMUSG00000078440 Dohh 1110033C18Rik|AI585913|AL022869|Hlrc1 deoxyhypusine hydroxylase/monooxygenase protein-coding common_peak1_39_300_-0.315873137942569_8.07568310778842_1.65136932489908-2 chr4 59267456 59268341 + 1.65136932489908 NA intron (NR_105031, intron 3 of 3) intron (NR_105031, intron 3 of 3) 7847 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_84_526_0.209982696215278_9.14665049974485_1.65102140938112 chr17 80061017 80062552 + 1.65102140938112 NA exon (NM_144802, exon 1 of 13) exon (NM_144802, exon 1 of 13) 484 NM_144802 72692 Mm.64579 NM_144802 ENSMUSG00000024095 Hnrnpll 2510028H02Rik|2810036L13Rik|AI256697|AI852082|Hnrpll heterogeneous nuclear ribonucleoprotein L-like protein-coding common_peak1_84_526_0.209982696215278_9.14665049974485_1.65102140938112 chr2 180920179 180921229 + 1.65102140938112 NA exon (NM_173761, exon 1 of 5) exon (NM_173761, exon 1 of 5) 232 NM_173761 228994 Mm.30205 NM_173761 ENSMUSG00000038848 Ythdf1 2210410K23Rik|8030473O16 YTH domain family 1 protein-coding common_peak1_247_2438_-0.10555490450281_11.1992965905448_1.65087082169608 chr11 19923868 19926249 + 1.65087082169608 NA intron (NM_033523, intron 1 of 5) CpG 616 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_295_2632_0.0971287787244162_11.4110561954083_1.65072443092572 chr17 72836600 72837965 + 1.65072443092572 NA intron (NM_027166, intron 1 of 2) CpG 578 NM_027166 383295 Mm.277533 NM_027166 ENSMUSG00000039770 Ypel5 2310076K21Rik|CGI-127 yippee-like 5 (Drosophila) protein-coding common_peak2_111_755_0.177546948169566_9.65101589830585_1.65063917602011 chr19 34191742 34193650 + 1.65063917602011 NA intron (NM_029682, intron 1 of 10) CpG 426 NM_029682 76630 Mm.130952 NM_029682 ENSMUSG00000024776 Stambpl1 1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP STAM binding protein like 1 protein-coding common_peak2_64_516_-0.237105949982038_8.89546749532392_1.6506264182205 chr10 79703824 79705271 + 1.6506264182205 NA exon (NM_001077184, exon 1 of 7) exon (NM_001077184, exon 1 of 7) 189 NM_009768 12215 Mm.726 NM_009768 ENSMUSG00000023175 Bsg AI115436|AI325119|CD147|EMMPRIN|HT-7 basigin protein-coding common_peak1_49_384_-0.276087132259523_8.4506710694525_1.65044854883704 chr1 192137395 192138523 + 1.65044854883704 NA promoter-TSS (NM_001290279) promoter-TSS (NM_001290279) 81 NM_001290278 214742 Mm.207457 NM_144814 ENSMUSG00000037395 Rcor3 4921514E24Rik|C730034D20Rik|E130101E15Rik REST corepressor 3 protein-coding common_peak2_49_384_-0.276087132259523_8.4506710694525_1.65044854883704 chr10 94846405 94848710 + 1.65044854883704 NA exon (NM_018797, exon 12 of 31) exon (NM_018797, exon 12 of 31) 97021 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding common_peak2_56_308_0.273035691645799_8.40798087372727_1.65028877700585 chr8 86891228 86893046 + 1.65028877700585 NA Intergenic MLTR11A|LTR|ERVK -6879 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_81_501_0.216512022301011_9.07979956510128_1.64927147204732 chr12 103424991 103425860 + 1.64927147204732 NA intron (NM_020494, intron 1 of 8) MIRb|SINE|MIR 355 NM_001159502 27225 Mm.3935 NM_020494 ENSMUSG00000041645 Ddx24 1700055J08Rik|2510027P10Rik|AI649272 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 protein-coding common_peak2_109_941_-0.171679920040512_9.79374328959253_1.64905666460393 chr2 68433955 68437278 + 1.64905666460393 NA intron (NM_016866, intron 1 of 17) intron (NM_016866, intron 1 of 17) 36365 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding unique_peak2_13_99_-0.583903750943154_6.35190431430315_1.64896270734846 chr11 49102640 49103462 + 1.64896270734846 NA intron (NM_010999, intron 2 of 5) ORR1E|LTR|ERVL-MaLR 10706 NM_146337 258334 Mm.390388 NM_146337 ENSMUSG00000047511 Olfr1396 MOR276-2 olfactory receptor 1396 protein-coding unique_peak2_37_177_0.351243083616849_7.65135497277482_1.64821446810651 chr14 73441186 73442508 + 1.64821446810651 NA Intergenic Intergenic -56576 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak2_37_177_0.351243083616849_7.65135497277482_1.64821446810651-2 chr17 26916590 26917669 + 1.64821446810651 NA promoter-TSS (NM_053173) promoter-TSS (NM_053173) 38 NM_053173 16580 Mm.491138 NM_016761 ENSMUSG00000024301 Kifc5b Hset|KNSL2|Kifc5a kinesin family member C5B protein-coding unique_peak2_30_227_-0.366207809430435_7.64978610944952_1.64821446810651-2 chr18 21008182 21009964 + 1.64821446810651 NA intron (NM_207623, intron 2 of 6) intron (NM_207623, intron 2 of 6) 7116 NM_207623 56515 Mm.253542 NM_019706 ENSMUSG00000024317 Rnf138 2410015A17Rik|2810480D20Rik|STRIN|Trif|Trif-d ring finger protein 138 protein-coding common_peak2_37_177_0.351243083616849_7.65135497277482_1.64821446810651 chr11 53775499 53776874 + 1.64821446810651 NA intron (NM_001159393, intron 9 of 9) intron (NM_001159393, intron 9 of 9) 5713 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_30_227_-0.366207809430435_7.64978610944952_1.64821446810651 chr15 38601484 38602806 + 1.64821446810651 NA Intergenic Intergenic -7211 NR_045757 69679 Mm.416890 NR_045757 ENSMUSG00000102106 2310043O21Rik - RIKEN cDNA 2310043O21 gene ncRNA unique_peak2_30_227_-0.366207809430435_7.64978610944952_1.64821446810651 chr1 170991703 170992978 + 1.64821446810651 NA Intergenic Intergenic -16269 NM_010187 14130 Mm.425062 NM_010187 ENSMUSG00000026656 Fcgr2b AI528646|CD32|F630109E10Rik|Fc[g]RII|FcgRII|Fcgr2|Fcgr2a|Fcr-2|Fcr-3|Ly-17|Ly-m20|LyM-1|Lym-1|fcRII Fc receptor, IgG, low affinity IIb protein-coding unique_peak2_22_87_0.479029185456213_6.6989462113654_1.64778087584275 chr2 5704480 5705348 + 1.64778087584275 NA intron (NM_177343, intron 1 of 10) intron (NM_177343, intron 1 of 10) 9848 NM_001290374 227541 Mm.191949 NM_177343 ENSMUSG00000039145 Camk1d A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK calcium/calmodulin-dependent protein kinase ID protein-coding common_peak2_22_87_0.479029185456213_6.6989462113654_1.64778087584275 chr16 32647733 32648461 + 1.64778087584275 NA intron (NM_016788, intron 1 of 15) B1_Mus1|SINE|Alu 3454 NM_016788 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding common_peak1_22_87_0.479029185456213_6.6989462113654_1.64778087584275-2 chrX 35904209 35904760 + 1.64778087584275 NA intron (NM_001009947, intron 1 of 52) intron (NM_001009947, intron 1 of 52) 15652 NM_001009947 75974 Mm.32873 NM_177745 ENSMUSG00000031093 Dock11 5033414A21Rik|8030476J24|Zizimin2|sph238 dedicator of cytokinesis 11 protein-coding common_peak1_22_87_0.479029185456213_6.6989462113654_1.64778087584275 chr1 64302522 64302992 + 1.64778087584275 NA Intergenic Intergenic -181368 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding common_peak1_38_291_-0.316881109272157_8.03138400424394_1.64751385999931 chr2 131189550 131190243 + 1.64751385999931 NA intron (NM_023117, intron 3 of 15) intron (NM_023117, intron 3 of 15) 2948 NM_001111075 12531 Mm.38444 NM_023117 ENSMUSG00000027330 Cdc25b AI604853 cell division cycle 25B protein-coding common_peak1_38_291_-0.316881109272157_8.03138400424394_1.64751385999931-2 chr4 62619442 62620306 + 1.64751385999931 NA intron (NM_001081650, intron 1 of 10) intron (NM_001081650, intron 1 of 10) 202 NM_134257 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_229_1910_0.113066639180728_10.9566453825678_1.64723403183921 chr17 34589733 34591810 + 1.64723403183921 NA exon (NM_134116, exon 3 of 4) exon (NM_134116, exon 3 of 4) 965 NM_134116 106512 Mm.26584 NM_134116 ENSMUSG00000034786 Gpsm3 AA960287|AGS4 G-protein signalling modulator 3 (AGS3-like, C. elegans) protein-coding common_peak1_43_217_0.318225729103381_7.92729718932862_1.64716990633347-2 chr7 98165024 98165552 + 1.64716990633347 NA intron (NM_007602, intron 1 of 12) intron (NM_007602, intron 1 of 12) -2946 NM_001301250 12337 Mm.326847 NM_007602 ENSMUSG00000035547 Capn5 nCL-3 calpain 5 protein-coding common_peak1_43_217_0.318225729103381_7.92729718932862_1.64716990633347 chr19 21942311 21943041 + 1.64716990633347 NA Intergenic Intergenic 164336 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_92_776_-0.190954067520121_9.50629375464765_1.64704565817033 chr6 128992247 128993906 + 1.64704565817033 NA promoter-TSS (NR_015455) promoter-TSS (NR_015455) 56 NR_015455 408064 Mm.172429 NR_015455 BC064078 - cDNA sequence BC064078 ncRNA common_peak1_24_98_0.456658572056774_6.857685906108_1.64698530327618-3 chr9 89208494 89208988 + 1.64698530327618 NA TTS (NM_007534) TTS (NM_007534) -2449 NM_026829 107885 Mm.486274 NM_026829 ENSMUSG00000066442 Mthfs 1110034I12Rik|2310020H23Rik|AI119695 5, 10-methenyltetrahydrofolate synthetase protein-coding common_peak1_24_98_0.456658572056774_6.857685906108_1.64698530327618 chr2 153014720 153015361 + 1.64698530327618 NA intron (NM_178939, intron 1 of 4) intron (NM_178939, intron 1 of 4) 343 NM_178939 68559 Mm.12746 NM_178939 ENSMUSG00000027472 Pdrg1 1110004D19Rik|AU020945|AV006589|Pdrg p53 and DNA damage regulated 1 protein-coding common_peak1_24_98_0.456658572056774_6.857685906108_1.64698530327618-2 chr5 105138391 105138845 + 1.64698530327618 NA intron (NM_008620, intron 1 of 10) L1M4|LINE|L1 934 NM_008620 17472 Mm.440525 NM_008620 ENSMUSG00000079363 Gbp4 AW228052|Mag-2|Mpa-2|Mpa2 guanylate binding protein 4 protein-coding common_peak2_78_477_0.221232283132569_9.01148294954703_1.6464189504289 chr3 40845944 40847608 + 1.6464189504289 NA promoter-TSS (NM_028140) promoter-TSS (NM_028140) 78 NM_028140 72175 Mm.130610 NM_028140 ENSMUSG00000025759 Mfsd8 2810423E13Rik|AI836898|AV142426|Cln7 major facilitator superfamily domain containing 8 protein-coding common_peak1_124_871_0.165936454237777_9.85115255189582_1.64635623900308 chr11 113649127 113650320 + 1.64635623900308 NA exon (NM_013581, exon 1 of 14) exon (NM_013581, exon 1 of 14) 194 NM_013581 16834 Mm.261620 NM_013581 ENSMUSG00000018661 Cog1 6030445I15|Ldlb|mKIAA1381 component of oligomeric golgi complex 1 protein-coding common_peak2_213_1742_0.118225876416444_10.8264697923339_1.6458844967178 chr2 170218213 170221783 + 1.6458844967178 NA Intergenic Intergenic -77323 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_75_453_0.227040338478689_8.94006865653026_1.64504507865422 chr11 79032991 79034816 + 1.64504507865422 NA non-coding (NR_045873, exon 6 of 6) non-coding (NR_045873, exon 6 of 6) 10306 NR_045873 790910 Mm.440410 NR_045873 Gm11201 ENSMUSG00000072637|OTTMUSG00000000169 predicted gene 11201 ncRNA common_peak1_135_1204_-0.151444236584084_10.1590953128253_1.64502682257644 chr7 39655339 39656366 + 1.64502682257644 NA Intergenic Intergenic 138086 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak2_69_406_0.239173041443642_8.78847150498807_1.64469213464687 chr6 113442022 113443236 + 1.64469213464687 NA promoter-TSS (NM_001243739) promoter-TSS (NM_001243739) 60 NM_001243739 67767 Mm.2053 NM_026365 ENSMUSG00000051256 Jagn1 5830427H10Rik jagunal homolog 1 protein-coding common_peak2_86_542_0.207989442861491_9.18880310923511_1.64429278333213 chr2 127721710 127723748 + 1.64429278333213 NA intron (NM_145532, intron 1 of 3) intron (NM_145532, intron 1 of 3) 7168 NM_145532 228576 Mm.133036 NM_145532 ENSMUSG00000027377 Mall BC012256|BENE mal, T cell differentiation protein-like protein-coding common_peak1_165_1519_-0.133737427976243_10.5029868943428_1.64417073161103 chr7 46794897 46796770 + 1.64417073161103 NA promoter-TSS (NM_008186) promoter-TSS (NM_008186) 48 NM_001005248 246694 Mm.379442 NM_178742 ENSMUSG00000014418 Hps5 AI646796|AL022647|C85120|haze|hz|maroon|mr|ru-2|ru2 Hermansky-Pudlak syndrome 5 protein-coding unique_peak2_25_104_0.44117572697481_6.93483338115353_1.64381211410686 chr2 176708298 176708875 + 1.64381211410686 NA intron (NM_001099327, intron 1 of 4) RMER17B|LTR|ERVK 233 NM_001099327 100043387 Mm.444048 NM_001099327 ENSMUSG00000078878 Gm14305 OTTMUSG00000016251 predicted gene 14305 protein-coding common_peak1_25_104_0.44117572697481_6.93483338115353_1.64381211410686 chr18 79081295 79081895 + 1.64381211410686 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 27796 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding unique_peak2_25_104_0.44117572697481_6.93483338115353_1.64381211410686-2 chr6 108441780 108442576 + 1.64381211410686 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -47565 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_21_157_-0.443983005483152_7.08178924543553_1.64318834837662 chr13 13392895 13394026 + 1.64318834837662 NA exon (NM_031999, exon 1 of 7) exon (NM_031999, exon 1 of 7) 164 NM_031999 83924 Mm.379269 NM_031999 ENSMUSG00000021306 Gpr137b AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1 G protein-coupled receptor 137B protein-coding common_peak1_21_157_-0.443983005483152_7.08178924543553_1.64318834837662 chr13 110394489 110394958 + 1.64318834837662 NA promoter-TSS (NM_152804) promoter-TSS (NM_152804) -321 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo-like kinase 2 protein-coding common_peak1_21_157_-0.443983005483152_7.08178924543553_1.64318834837662-2 chr5 115515506 115515974 + 1.64318834837662 NA intron (NM_011223, intron 1 of 10) B3|SINE|B2 9064 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak1_14_46_0.62745526973371_5.86831648654449_1.64294012011226-2 chr16 59458884 59459285 + 1.64294012011226 NA intron (NM_001081190, intron 8 of 8) intron (NM_001081190, intron 8 of 8) 10154 NR_040568 75636 Mm.490522 NR_040568 ENSMUSG00000099983 1700022E09Rik - RIKEN cDNA 1700022E09 gene ncRNA common_peak1_14_46_0.62745526973371_5.86831648654449_1.64294012011226 chr10 117914628 117915095 + 1.64294012011226 NA Intergenic RSINE1|SINE|B4 -10598 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA unique_peak1_14_46_0.62745526973371_5.86831648654449_1.64294012011226-2 chr18 24653843 24654196 + 1.64294012011226 NA exon (NM_026779, exon 1 of 15) exon (NM_026779, exon 1 of 15) 328 NM_026779 68591 Mm.28252 NM_026779 ENSMUSG00000039616 Mocos 1110018O12Rik|HMCS|MCS|MOS molybdenum cofactor sulfurase protein-coding unique_peak1_14_46_0.62745526973371_5.86831648654449_1.64294012011226 chr1 60158134 60158574 + 1.64294012011226 NA Intergenic MT2A|LTR|ERVL -22245 NM_173444 269198 Mm.205224 NM_173444 ENSMUSG00000073664 Nbeal1 2310076G13Rik|A530050O19Rik|A530083I02Rik|AI662228|ALS2CR17 neurobeachin like 1 protein-coding common_peak1_14_46_0.62745526973371_5.86831648654449_1.64294012011226-3 chr8 104340924 104341157 + 1.64294012011226 NA intron (NM_024217, intron 1 of 4) CpG 446 NM_024217 68119 Mm.390108 NM_024217 ENSMUSG00000031875 Cmtm3 9430096L06Rik|AI413895|BNAS2|Cklfsf3 CKLF-like MARVEL transmembrane domain containing 3 protein-coding common_peak2_20_150_-0.460930095526581_7.00793969156179_1.64264262164333 chr12 81594373 81594990 + 1.64264262164333 NA intron (NM_027213, intron 1 of 7) intron (NM_027213, intron 1 of 7) 277 NM_027213 69792 Mm.279993 NM_027213 ENSMUSG00000002679 Med6 1500012F11Rik|AU019660|AV213303 mediator complex subunit 6 protein-coding unique_peak2_20_150_-0.460930095526581_7.00793969156179_1.64264262164333 chr11 53324173 53325278 + 1.64264262164333 NA promoter-TSS (NM_026479) promoter-TSS (NM_026479) 36 NM_026479 67966 Mm.288072 NM_026479 ENSMUSG00000018239 Zcchc10 2410141K03Rik|AA675321|D11Ertd416e zinc finger, CCHC domain containing 10 protein-coding unique_peak2_20_150_-0.460930095526581_7.00793969156179_1.64264262164333-2 chr12 51820901 51822338 + 1.64264262164333 NA intron (NM_144788, intron 2 of 42) Lx4A|LINE|L1 7917 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak1_20_150_-0.460930095526581_7.00793969156179_1.64264262164333 chr10 85386814 85387332 + 1.64264262164333 NA 5' UTR (NM_028709, exon 1 of 17) 5' UTR (NM_028709, exon 1 of 17) 259 NM_028709 74007 Mm.36544 NM_028709 ENSMUSG00000020042 Btbd11 6330404E16Rik BTB (POZ) domain containing 11 protein-coding common_peak1_20_150_-0.460930095526581_7.00793969156179_1.64264262164333-2 chr18 12634744 12635253 + 1.64264262164333 NA Intergenic ID_B1|SINE|B4 -8535 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding common_peak1_56_444_-0.253162806303587_8.67108012270197_1.6425492616846 chr4 6446490 6447552 + 1.6425492616846 NA intron (NM_010945, intron 1 of 30) intron (NM_010945, intron 1 of 30) 7250 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding unique_peak2_56_444_-0.253162806303587_8.67108012270197_1.6425492616846 chr19 45750949 45753071 + 1.6425492616846 NA 3' UTR (NM_023799, exon 16 of 16) 3' UTR (NM_023799, exon 16 of 16) -2447 NM_008723 18150 Mm.1406 NM_008723 ENSMUSG00000056209 Npm3 Nub1 nucleoplasmin 3 protein-coding common_peak2_299_2678_0.0958954648200017_11.4354265982524_1.64252894589534 chr7 66101616 66106203 + 1.64252894589534 NA Intergenic Tigger5|DNA|TcMar-Tigger -5606 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_281_2476_0.0994997615192936_11.324128034006_1.64244800453604 chr9 21236770 21240016 + 1.64244800453604 NA 5' UTR (NM_016679, exon 1 of 5) 5' UTR (NM_016679, exon 1 of 5) 939 NM_016679 50868 Mm.248266 NM_016679 ENSMUSG00000003308 Keap1 INRF2|mKIAA0132 kelch-like ECH-associated protein 1 protein-coding unique_peak2_28_211_-0.379257140050631_7.53829188453788_1.64244673667162 chr3 68784304 68785292 + 1.64244673667162 NA Intergenic Intergenic -84788 NM_001167996 68725 Mm.45741 NM_001167996 ENSMUSG00000046999 1110032F04Rik AI115547 RIKEN cDNA 1110032F04 gene protein-coding common_peak1_28_211_-0.379257140050631_7.53829188453788_1.64244673667162 chr10 42055083 42055872 + 1.64244673667162 NA Intergenic RLTR11A2|LTR|ERVK -37095 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak1_48_375_-0.277712614766953_8.41573254429416_1.64238603969876 chr2 103760461 103761252 + 1.64238603969876 NA intron (NM_153126, intron 1 of 28) CpG 394 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak2_48_375_-0.277712614766953_8.41573254429416_1.64238603969876 chr19 11064487 11065878 + 1.64238603969876 NA Intergenic Lx3C|LINE|L1 -14616 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA common_peak2_113_981_-0.168468183578161_9.85534512252561_1.6419999353219 chr17 35231301 35234535 + 1.6419999353219 NA intron (NM_010909, intron 2 of 3) intron (NM_010909, intron 2 of 3) 2897 NM_010909 18038 Mm.300795 NM_010909 ENSMUSG00000042419 Nfkbil1 Def-7|IKBL nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 protein-coding unique_peak2_10_78_-0.670595316669507_5.96848308984235_1.64187255238484 chr8 92355810 92356312 + 1.64187255238484 NA promoter-TSS (NR_110452) promoter-TSS (NR_110452) 59 NR_110452 71296 Mm.86664 NR_033641 ENSMUSG00000031736 Crnde 4933436C20Rik colorectal neoplasia differentially expressed (non-protein coding) ncRNA common_peak1_52_409_-0.263738334062333_8.54761093247428_1.64165541131932 chr10 14056880 14057902 + 1.64165541131932 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 91012 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_94_795_-0.188154830268438_9.54254720540943_1.64146401158317 chr14 103650071 103651395 + 1.64146401158317 NA exon (NM_198014, exon 1 of 7) exon (NM_198014, exon 1 of 7) 490 NM_198014 105439 Mm.27548 NM_198014 ENSMUSG00000055717 Slain1 9630044O09Rik|AA675320|AW742596 SLAIN motif family, member 1 protein-coding common_peak1_94_795_-0.188154830268438_9.54254720540943_1.64146401158317-2 chr3 137918301 137919413 + 1.64146401158317 NA intron (NM_019920, intron 1 of 6) intron (NM_019920, intron 1 of 6) 302 NM_019920 56692 Mm.331392 NM_019920 ENSMUSG00000091512 Lamtor3 AW556229|Map2k1ip1|Mapbp|Mapksp1|Mp1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding common_peak2_27_203_-0.38586059195357_7.47949504599471_1.64102443909499 chr16 18620571 18621833 + 1.64102443909499 NA TTS (NM_213614) TTS (NM_213614) 1201 NM_001001999 14724 Mm.475622 NM_010327 ENSMUSG00000050761 Gp1bb - glycoprotein Ib, beta polypeptide protein-coding common_peak1_27_203_-0.38586059195357_7.47949504599471_1.64102443909499 chr1 165184096 165184605 + 1.64102443909499 NA intron (NM_145512, intron 4 of 7) intron (NM_145512, intron 4 of 7) 10083 NM_145512 108735 Mm.288369 NM_145512 ENSMUSG00000040848 Sft2d2 2010005O13Rik|AI506168|AW561909|cI-45 SFT2 domain containing 2 protein-coding common_peak1_27_203_-0.38586059195357_7.47949504599471_1.64102443909499-3 chr5 146824558 146825108 + 1.64102443909499 NA Intergenic Intergenic -8057 NM_019647 19933 Mm.316592 NM_019647 ENSMUSG00000041453 Rpl21 8430440E03Rik|L21 ribosomal protein L21 protein-coding common_peak1_27_203_-0.38586059195357_7.47949504599471_1.64102443909499-2 chr16 32654573 32655071 + 1.64102443909499 NA intron (NM_016788, intron 1 of 15) intron (NM_016788, intron 1 of 15) 10179 NM_016788 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding common_peak2_96_626_0.19301673056137_9.38882999808272_1.64099636184791 chr13 95523710 95525454 + 1.64099636184791 NA intron (NM_007974, intron 1 of 1) CpG 658 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak1_26_195_-0.392502277275613_7.4184587054774_1.64074746858701 chr2 155050323 155050821 + 1.64074746858701 NA intron (NM_015770, intron 3 of 3) intron (NM_015770, intron 3 of 3) 23925 NM_016661 269378 Mm.330692 NM_016661 ENSMUSG00000027597 Ahcy AA987153|AL024110|CuBP|SAHH S-adenosylhomocysteine hydrolase protein-coding common_peak1_26_195_-0.392502277275613_7.4184587054774_1.64074746858701-2 chr6 50427850 50428325 + 1.64074746858701 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 28083 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_26_195_-0.392502277275613_7.4184587054774_1.64074746858701 chrX 108834426 108835260 + 1.64074746858701 NA promoter-TSS (NM_001081477) promoter-TSS (NM_001081477) 365 NR_015493 69964 Mm.160066 NR_015493 ENSMUSG00000086629 2810403D21Rik 1810022M18Rik|4632410B05Rik|AU017716 RIKEN cDNA 2810403D21 gene ncRNA common_peak2_202_1924_-0.118443306691587_10.8514210771238_1.64064367530618 chr14 27247621 27251146 + 1.64064367530618 NA intron (NM_027871, intron 1 of 10) intron (NM_027871, intron 1 of 10) 11373 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_59_331_0.260229312437135_8.50515408756549_1.64005731599308 chr2 128295394 128296441 + 1.64005731599308 NA Intergenic Intergenic 133434 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_42_210_0.324627981546765_7.88341317948057_1.63980257463311-2 chr5 103759829 103761230 + 1.63980257463311 NA intron (NM_001080798, intron 1 of 19) intron (NM_001080798, intron 1 of 19) 5956 NM_001080798 17355 Mm.6949 NM_133919 ENSMUSG00000029313 Aff1 9630032B01Rik|AW319193|Af4|Mllt2h|Rob AF4/FMR2 family, member 1 protein-coding common_peak2_42_210_0.324627981546765_7.88341317948057_1.63980257463311 chr17 23924268 23925541 + 1.63980257463311 NA Intergenic Intergenic 7446 NM_001077633 620253 Mm.390964 NM_001077633 ENSMUSG00000057417 Dcpp3 Dcpp-3|EG620253|SPT-3 demilune cell and parotid protein 3 protein-coding common_peak1_23_172_-0.42085275954463_7.22420184786441_1.63950901347694 chr10 26227599 26228209 + 1.63950901347694 NA Intergenic Intergenic -1803 NM_001013766 268288 Mm.213322 NM_001013766 ENSMUSG00000051354 Samd3 Gm623 sterile alpha motif domain containing 3 protein-coding common_peak1_75_615_-0.213197714925299_9.16018768323225_1.63922011717617 chr18 36782661 36783713 + 1.63922011717617 NA promoter-TSS (NM_008214) promoter-TSS (NM_008214) 18 NM_008214 15115 Mm.10528 NM_008214 ENSMUSG00000001380 Hars MMHRS histidyl-tRNA synthetase protein-coding common_peak1_115_1001_-0.166778856309927_9.88527736504025_1.63903410773429 chr10 75920907 75922315 + 1.63903410773429 NA promoter-TSS (NM_011418) promoter-TSS (NM_011418) 3 NM_011418 20587 Mm.279751 NM_011418 ENSMUSG00000000902 Smarcb1 AU020204|Baf47|Ini1|SNF5/INI1|Snf5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 protein-coding common_peak1_43_333_-0.297294238593745_8.23505717317718_1.63884736253538-2 chr11 106202260 106202955 + 1.63884736253538 NA intron (NM_026009, intron 10 of 12) intron (NM_026009, intron 10 of 12) -9004 NM_001252449 72149 Mm.403722 NM_028126 ENSMUSG00000069631 Strada 2610019A05Rik|6030402H20Rik|AI480680|E130112C09Rik STE20-related kinase adaptor alpha protein-coding common_peak1_43_333_-0.297294238593745_8.23505717317718_1.63884736253538 chr11 104362204 104363343 + 1.63884736253538 NA intron (NM_001081045, intron 4 of 13) intron (NM_001081045, intron 4 of 13) 79518 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding unique_peak2_43_333_-0.297294238593745_8.23505717317718_1.63884736253538 chr16 84620976 84622381 + 1.63884736253538 NA Intergenic Intergenic -58111 NR_040537 78023 Mm.243853 NR_040537 4930529L06Rik - RIKEN cDNA 4930529L06 gene ncRNA common_peak2_119_827_0.168394097471092_9.77768400623487_1.63779700955921 chr12 31350292 31352049 + 1.63779700955921 NA intron (NM_007861, intron 1 of 13) CpG 301 NM_007861 13382 Mm.3131 NM_007861 ENSMUSG00000020664 Dld - dihydrolipoamide dehydrogenase protein-coding common_peak1_88_559_0.203735351819221_9.23115069285458_1.63607106950146 chr15 79402597 79403807 + 1.63607106950146 NA promoter-TSS (NM_001253819) promoter-TSS (NM_001253819) 37 NM_001253820 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak1_88_559_0.203735351819221_9.23115069285458_1.63607106950146-2 chr5 125177507 125179060 + 1.63607106950146 NA intron (NM_001253904, intron 1 of 47) CpG 931 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak1_194_1547_0.12485928034177_10.6586193963153_1.6359518562031 chr14 70576746 70578528 + 1.6359518562031 NA promoter-TSS (NM_153136) promoter-TSS (NM_153136) -210 NM_153136 213484 Mm.34191 NM_153136 ENSMUSG00000045211 Nudt18 BC036718 nudix (nucleoside diphosphate linked moiety X)-type motif 18 protein-coding common_peak1_24_180_-0.413830694946822_7.2929305396098_1.6357329750111 chr10 51490972 51491545 + 1.6357329750111 NA intron (NM_001291894, intron 2 of 8) intron (NM_001291894, intron 2 of 8) 360 NM_013532 14728 Mm.34408 NM_013532 ENSMUSG00000062593 Lilrb4a CD85K|Gp49b|HM18|ILT3|LIR-5|Lilrb4|gp49 leukocyte immunoglobulin-like receptor, subfamily B, member 4A protein-coding common_peak1_24_180_-0.413830694946822_7.2929305396098_1.6357329750111-2 chr5 123395847 123396456 + 1.6357329750111 NA intron (NM_177582, intron 1 of 8) PB1D10|SINE|Alu 1353 NM_133917 208104 Mm.83277 NM_133917 ENSMUSG00000038342 Mlxip AW228700|Mir|bHLHe36 MLX interacting protein protein-coding unique_peak2_24_180_-0.413830694946822_7.2929305396098_1.6357329750111 chr13 34690774 34692142 + 1.6357329750111 NA Intergenic Intergenic 38535 NR_105041 101056149 Mm.421309 NR_105041 ENSMUSG00000086786 Gm15908 OTTMUSG00000027716 predicted gene 15908 ncRNA common_peak2_212_1732_0.118238122840131_10.8181750005802_1.63572507868611 chr15 98917181 98919085 + 1.63572507868611 NA promoter-TSS (NM_029098) promoter-TSS (NM_029098) -35 NM_029098 74775 Mm.385020 NM_029098 ENSMUSG00000022999 Lmbr1l 1110013E13Rik|AA415653|D15Ertd735e|Limr limb region 1 like protein-coding common_peak1_121_845_0.166617909113379_9.80782280767664_1.635523318169 chr11 120150619 120151318 + 1.635523318169 NA intron (NM_001164799, intron 1 of 15) CpG 383 NM_001164799 72055 Mm.253403 NM_024249 ENSMUSG00000061306 Slc38a10 1810073N04Rik solute carrier family 38, member 10 protein-coding unique_peak2_35_164_0.364975458813207_7.54880994365242_1.63527226923817 chr11 69043380 69044347 + 1.63527226923817 NA Intergenic Intergenic -1774 NM_011496 20877 Mm.3488 NM_011496 ENSMUSG00000020897 Aurkb AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5 aurora kinase B protein-coding common_peak1_35_164_0.364975458813207_7.54880994365242_1.63527226923817-2 chr10 118861648 118862408 + 1.63527226923817 NA intron (NM_001014390, intron 2 of 2) intron (NM_001014390, intron 2 of 2) 6875 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_35_164_0.364975458813207_7.54880994365242_1.63527226923817 chr1 192078030 192078846 + 1.63527226923817 NA intron (NM_011633, intron 1 of 9) intron (NM_011633, intron 1 of 9) 14161 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak1_47_366_-0.279248473564762_8.38001201606083_1.63456419295268 chr7 131371044 131371725 + 1.63456419295268 NA exon (NM_001039534, exon 1 of 6) exon (NM_001039534, exon 1 of 6) 238 NM_001039534 214580 Mm.272948 NM_177609 ENSMUSG00000063179 Pstk 5430423O14Rik|5730458D16Rik|Gm1099|R75284 phosphoseryl-tRNA kinase protein-coding common_peak1_93_601_0.196123721852674_9.33168153768604_1.6344059142678 chr1 161804223 161805592 + 1.6344059142678 NA Intergenic Intergenic -16412 NM_010177 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_523_5942_-0.0666637813910569_12.5036437749151_1.63369529962725 chr2 22805791 22811062 + 1.63369529962725 NA intron (NM_019456, intron 1 of 13) B3|SINE|B2 34099 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak1_25_188_-0.406821179580141_7.358831834431_1.63362163975454-2 chrX 36989293 36989924 + 1.63362163975454 NA promoter-TSS (NM_001253706) promoter-TSS (NM_001253706) 87 NM_001177324 56526 Mm.260036 NM_019942 ENSMUSG00000050379 Sept6 2810035H17Rik|C920001C06Rik|Sep6|mKIAA0128 septin 6 protein-coding common_peak1_25_188_-0.406821179580141_7.358831834431_1.63362163975454 chr11 3335956 3336549 + 1.63362163975454 NA intron (NM_178149, intron 5 of 5) intron (NM_178149, intron 5 of 5) 5521 NM_178149 216505 Mm.390323 NM_178149 ENSMUSG00000034614 Pik3ip1 1500004A08Rik|5830455E04Rik|Crkd|Hgfl phosphoinositide-3-kinase interacting protein 1 protein-coding unique_peak2_25_188_-0.406821179580141_7.358831834431_1.63362163975454 chr6 125265385 125266353 + 1.63362163975454 NA non-coding (NR_015527, exon 1 of 4) non-coding (NR_015527, exon 1 of 4) 344 NR_015527 73870 Mm.440681 NR_015527 ENSMUSG00000108129 4930417O13Rik - RIKEN cDNA 4930417O13 gene ncRNA common_peak2_25_188_-0.406821179580141_7.358831834431_1.63362163975454 chr12 108757313 108758233 + 1.63362163975454 NA Intergenic Intergenic -35538 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak2_25_188_-0.406821179580141_7.358831834431_1.63362163975454-2 chr5 114707490 114708301 + 1.63362163975454 NA 5' UTR (NM_029992, exon 1 of 13) 5' UTR (NM_029992, exon 1 of 13) 116 NM_029992 77832 Mm.239698 NM_029992 ENSMUSG00000002486 Tchp A930031F18Rik|AV279199 trichoplein, keratin filament binding protein-coding common_peak1_146_1076_0.148208218519761_10.1469066438041_1.63359446725207 chr6 129047928 129050096 + 1.63359446725207 NA intron (NR_024262, intron 1 of 5) RMER17A-int|LTR|ERVK 3111 NR_024263 232408 Mm.259262 NM_153094 ENSMUSG00000030154 Klrb1f A630024B12Rik|Nkr-p1f|Nkrp1-f|Nkrp1f killer cell lectin-like receptor subfamily B member 1F protein-coding common_peak1_65_376_0.245511545578573_8.68117648605795_1.6327445801986 chr5 9108143 9109206 + 1.6327445801986 NA intron (NM_001081029, intron 2 of 4) intron (NM_001081029, intron 2 of 4) 7937 NM_001081029 652925 Mm.439954 NM_001081029 ENSMUSG00000079659 Tmem243 4930420K17Rik|E030031F02Rik transmembrane protein 243, mitochondrial protein-coding common_peak1_77_470_0.219972511181433_8.9895695052035_1.63231240759988 chr3 40846004 40847474 + 1.63231240759988 NA promoter-TSS (NR_038067) promoter-TSS (NR_038067) 115 NM_028140 72175 Mm.130610 NM_028140 ENSMUSG00000025759 Mfsd8 2810423E13Rik|AI836898|AV142426|Cln7 major facilitator superfamily domain containing 8 protein-coding common_peak2_112_970_-0.167807987246791_9.8394234917958_1.63212411686634 chr10 44267596 44269368 + 1.63212411686634 NA 5' UTR (NM_001314013, exon 1 of 7) 5' UTR (NM_001314013, exon 1 of 7) 143 NM_053069 11793 Mm.22264 NM_053069 ENSMUSG00000038160 Atg5 2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy autophagy related 5 protein-coding common_peak1_62_497_-0.238392772116299_8.84080554600993_1.63162055331921 chr2 92203963 92205071 + 1.63162055331921 NA intron (NM_001109691, intron 2 of 18) intron (NM_001109691, intron 2 of 18) 12540 NR_035480 100316756 NR_035480 ENSMUSG00000088639 Mir1955 mir-1955|mmu-mir-1955 microRNA 1955 ncRNA common_peak1_74_446_0.226018687106349_8.91714036473649_1.63108609506999 chr9 21244309 21245953 + 1.63108609506999 NA 5' UTR (NM_053190, exon 3 of 3) 5' UTR (NM_053190, exon 3 of 3) 3312 NM_053190 94226 Mm.190619 NM_053190 ENSMUSG00000045087 S1pr5 Edg8|S1P5|lpB4 sphingosine-1-phosphate receptor 5 protein-coding common_peak1_36_275_-0.328740805566758_7.94415405399479_1.63078496142584 chr1 86703568 86704276 + 1.63078496142584 NA intron (NM_153530, intron 1 of 20) CpG 118 NM_001172157 208718 Mm.389152 NM_153530 ENSMUSG00000053333 Dis3l2 4930429A22Rik|8030493P09Rik DIS3 like 3'-5' exoribonuclease 2 protein-coding common_peak1_36_275_-0.328740805566758_7.94415405399479_1.63078496142584-2 chr11 98466251 98467016 + 1.63078496142584 NA 3' UTR (NM_011771, exon 8 of 8) 3' UTR (NM_011771, exon 8 of 8) 19799 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak1_14_106_-0.559422864989799_6.46175555390625_1.62969718097463 chr8 120492575 120492942 + 1.62969718097463 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) 3892 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_116_800_0.171419533352434_9.73136819908493_1.62920518808171 chr1 86228090 86230281 + 1.62920518808171 NA intron (NM_001310702, intron 19 of 24) intron (NM_001310702, intron 19 of 24) -74036 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak2_199_1890_-0.119081522254309_10.8253928868226_1.62910485157582 chr14 121420822 121424498 + 1.62910485157582 NA Intergenic Intergenic -43430 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_229_2229_-0.109649292649483_11.0680033484829_1.62788371650127 chr13 100650427 100652077 + 1.62788371650127 NA promoter-TSS (NM_001283011) promoter-TSS (NM_001283011) -91 NM_027139 108143 Mm.301148 NM_027139 ENSMUSG00000052293 Taf9 2310012M09Rik|AA673500|AU045423|TAFII31|TAFII32|Taf2g TATA-box binding protein associated factor 9 protein-coding common_peak2_71_578_-0.219509553743857_9.06766476111731_1.62759207147981 chr6 33059343 33060505 + 1.62759207147981 NA intron (NM_025336, intron 1 of 7) CpG 228 NM_025336 66075 Mm.21501 NM_025336 ENSMUSG00000053768 Chchd3 0610041L09Rik|1700039J09Rik|AW558177 coiled-coil-helix-coiled-coil-helix domain containing 3 protein-coding common_peak2_263_2624_-0.100944826220898_11.3076292943304_1.62746995358194 chr12 21415128 21418865 + 1.62746995358194 NA exon (NM_011739, exon 1 of 5) exon (NM_011739, exon 1 of 5) 440 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_46_238_0.302264279445269_8.05199894770338_1.62722576641106 chr19 14387477 14388466 + 1.62722576641106 NA Intergenic Intergenic 50535 NR_003027 19862 NR_003027 ENSMUSG00000095132 Rnu6 - U6 small nuclear RNA snRNA common_peak2_41_204_0.324606855479408_7.84178352724515_1.62709824315763-2 chr2 126466428 126467965 + 1.62709824315763 NA intron (NM_001080944, intron 3 of 27) intron (NM_001080944, intron 3 of 27) 24357 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak1_41_204_0.324606855479408_7.84178352724515_1.62709824315763-2 chr11 51763446 51764218 + 1.62709824315763 NA intron (NM_025535, intron 1 of 6) CpG 169 NM_025535 66397 Mm.196592 NM_025535 ENSMUSG00000020386 Sar1b 2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb secretion associated Ras related GTPase 1B protein-coding common_peak1_41_204_0.324606855479408_7.84178352724515_1.62709824315763 chr1 183803643 183804631 + 1.62709824315763 NA Intergenic Intergenic 229861 NM_028516 73363 Mm.50115 NM_028516 ENSMUSG00000044854 1700056E22Rik - RIKEN cDNA 1700056E22 gene protein-coding common_peak2_41_204_0.324606855479408_7.84178352724515_1.62709824315763-3 chr7 127903854 127904750 + 1.62709824315763 NA intron (NM_009739, intron 1 of 11) intron (NM_009739, intron 1 of 11) 229 NM_009739 12041 Mm.425495 NM_009739 ENSMUSG00000030802 Bckdk AI327402 branched chain ketoacid dehydrogenase kinase protein-coding common_peak2_41_204_0.324606855479408_7.84178352724515_1.62709824315763 chr14 65105185 65106673 + 1.62709824315763 NA Intergenic Intergenic -7823 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak1_68_551_-0.225929136531374_8.99555988851248_1.62709659500032 chr9 77754480 77755367 + 1.62709659500032 NA exon (NM_010295, exon 1 of 16) exon (NM_010295, exon 1 of 16) 388 NM_010295 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding common_peak2_167_1278_0.13651102847593_10.3890560631196_1.62706956639758 chr3 130059519 130061831 + 1.62706956639758 NA 5' UTR (NM_207209, exon 1 of 24) 5' UTR (NM_207209, exon 1 of 24) 232 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding common_peak1_109_738_0.178472775426121_9.61866694185921_1.62684422691889 chr9 108304918 108306019 + 1.62684422691889 NA promoter-TSS (NM_016802) promoter-TSS (NM_016802) 691 NM_133986 102791 Mm.24670 NM_133986 ENSMUSG00000039461 Tcta 9130410M22Rik|AW553637|C85065|Tctal T cell leukemia translocation altered gene protein-coding common_peak1_118_818_0.169352728598636_9.76239600594033_1.62654116705013 chr11 82764014 82765051 + 1.62654116705013 NA promoter-TSS (NM_001291242) promoter-TSS (NM_001291242) 187 NM_025884 66983 Mm.29622 NM_025884 ENSMUSG00000046010 Zfp830 2410003C20Rik|AV301118|AW048207|Ccdc16|Omcg1|Znf830 zinc finger protein 830 protein-coding common_peak1_116_1010_-0.16448931614187_9.89932262383208_1.62642434706093 chr3 28263335 28264429 + 1.62642434706093 NA intron (NM_001163007, intron 1 of 31) intron (NM_001163007, intron 1 of 31) 668 NM_001163009 665113 Mm.126193 NM_026910 ENSMUSG00000027692 Tnik 1500031A17Rik|4831440I19Rik|AI451411|C530008O15Rik|C630040K21Rik TRAF2 and NCK interacting kinase protein-coding common_peak2_261_2256_0.103508869841393_11.1919451381125_1.62623622884363 chr10 17945849 17948948 + 1.62623622884363 NA intron (NM_001033432, intron 1 of 3) CpG 669 NM_001033432 380629 Mm.276430 NM_001033432 ENSMUSG00000039879 Heca Gm869|HDC|HDCL hdc homolog, cell cycle regulator protein-coding common_peak1_34_158_0.368562759239178_7.49716433490394_1.62617478880877-3 chr8 13621039 13621713 + 1.62617478880877 NA intron (NM_009025, intron 2 of 23) intron (NM_009025, intron 2 of 23) 56211 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_34_158_0.368562759239178_7.49716433490394_1.62617478880877 chr17 87118409 87118925 + 1.62617478880877 NA intron (NM_019654, intron 1 of 2) MTEa|LTR|ERVL-MaLR 10988 NM_019654 56468 Mm.126885 NM_019654 ENSMUSG00000037104 Socs5 1810018L08Rik|Cish5|mKIAA0671 suppressor of cytokine signaling 5 protein-coding common_peak1_34_158_0.368562759239178_7.49716433490394_1.62617478880877-2 chr5 113858776 113859498 + 1.62617478880877 NA intron (NM_011779, intron 3 of 10) intron (NM_011779, intron 3 of 10) -28636 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak1_337_3116_0.0884837200903981_11.6501842996706_1.62519583006855 chr8 69919108 69922517 + 1.62519583006855 NA intron (NM_001286450, intron 3 of 12) intron (NM_001286450, intron 3 of 12) -18254 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak1_11_84_-0.622227779231962_6.09827704652172_1.62455010901961-2 chr9 103366001 103366368 + 1.62455010901961 NA promoter-TSS (NM_001134426) promoter-TSS (NM_001134426) -404 NM_001134426 321022 Mm.261025 NM_175565 ENSMUSG00000032803 Cdv3 2510010F10Rik|C230084J24Rik|C79446|TPP36 carnitine deficiency-associated gene expressed in ventricle 3 protein-coding unique_peak2_11_84_-0.622227779231962_6.09827704652172_1.62455010901961 chr9 21147001 21147471 + 1.62455010901961 NA intron (NM_016742, intron 1 of 7) intron (NM_016742, intron 1 of 7) 2670 NM_016742 12539 Mm.32331 NM_016742 ENSMUSG00000019471 Cdc37 p50|p50Cdc37 cell division cycle 37 protein-coding common_peak1_11_84_-0.622227779231962_6.09827704652172_1.62455010901961 chr2 129177772 129178154 + 1.62455010901961 NA TTS (NR_045264) TTS (NR_045264) 2710 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 OTTMUSG00000015420 expressed sequence AI847159 ncRNA common_peak2_120_836_0.167483032085105_9.7928253285929_1.62423309560259 chr12 84996195 84997319 + 1.62423309560259 NA exon (NM_178363, exon 1 of 21) exon (NM_178363, exon 1 of 21) 436 NM_178363 56531 Mm.153183 NM_178363 ENSMUSG00000021244 Ylpm1 A930013E17Rik|ZAP|Zap3 YLP motif containing 1 protein-coding common_peak1_118_1030_-0.162756247128465_9.92845049380388_1.62407980501261 chr14 102805799 102807039 + 1.62407980501261 NA Intergenic Intergenic 176213 NR_039592 100628599 NR_039592 ENSMUSG00000092901 Mir5130 mir-5130|mmu-mir-5130|mu-mir-5130 microRNA 5130 ncRNA common_peak1_87_551_0.204497908288495_9.21077341092242_1.62388796943461 chr2 93849057 93850196 + 1.62388796943461 NA 5' UTR (NM_183220, exon 1 of 15) 5' UTR (NM_183220, exon 1 of 15) 173 NM_183220 329470 Mm.486910 NM_183220 ENSMUSG00000040272 Accs 2610203E10Rik|Phacs 1-aminocyclopropane-1-carboxylate synthase (non-functional) protein-coding common_peak2_87_551_0.204497908288495_9.21077341092242_1.62388796943461 chr2 180272688 180273519 + 1.62388796943461 NA exon (NM_145851, exon 1 of 10) exon (NM_145851, exon 1 of 10) 362 NM_145851 252966 Mm.386884 NM_145851 ENSMUSG00000038990 Cables2 ik3-2 CDK5 and Abl enzyme substrate 2 protein-coding common_peak1_279_2455_0.0991878027124251_11.3116887467264_1.62381726230723 chr13 56134308 56136013 + 1.62381726230723 NA intron (NM_012015, intron 1 of 8) CpG 390 NM_012015 26914 Mm.283802 NM_012015 ENSMUSG00000015937 H2afy H2AF12M|mH2a1|macroH2A1 H2A histone family, member Y protein-coding common_peak1_50_266_0.286974845439902_8.2041833544075_1.62379001478444 chr2 25167635 25168627 + 1.62379001478444 NA Intergenic CpG -12627 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak1_163_1497_-0.134154021020612_10.4817448979484_1.6235024180319 chr11 97133710 97134896 + 1.6235024180319 NA Intergenic Intergenic 12116 NR_106094 102466822 NR_106094 ENSMUSG00000099286 Mir7235 Gm27986|mmu-mir-7235 microRNA 7235 ncRNA common_peak2_141_1029_0.151343234962793_10.084100239552_1.62321788835318 chr8 10461056 10464216 + 1.62321788835318 NA intron (NM_001081397, intron 21 of 35) intron (NM_001081397, intron 21 of 35) 308713 NM_001081397 244281 Mm.422761 NM_001081397 ENSMUSG00000039057 Myo16 BM140241|C230040D10Rik|Gm1105|NYAP3|mKIAA0865 myosin XVI protein-coding common_peak2_54_426_-0.256801241234575_8.6096916390032_1.62309927900299 chr11 83941587 83942885 + 1.62309927900299 NA exon (NM_030096, exon 1 of 15) exon (NM_030096, exon 1 of 15) 146 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding common_peak2_264_2289_0.102715469337127_11.2124896176529_1.62303858721934 chr2 29721539 29727395 + 1.62303858721934 NA intron (NM_054050, intron 12 of 23) MTE2b|LTR|ERVL-MaLR -37061 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak1_46_358_-0.284708946397034_8.34548556062454_1.62292804368578 chr4 16163982 16164439 + 1.62292804368578 NA promoter-TSS (NM_138952) promoter-TSS (NM_138952) 100 NR_045765 100415915 Mm.387180 NR_045765 ENSMUSG00000085112 A530072M11Rik - RIKEN cDNA gene A530072M11 ncRNA common_peak2_242_2050_0.108364822666312_11.056294187813_1.62231929758755 chr2 32586317 32589064 + 1.62231929758755 NA intron (NM_011373, intron 1 of 4) intron (NM_011373, intron 1 of 4) 612 NM_011373 20448 Mm.27446 NM_011373 ENSMUSG00000079442 St6galnac4 SIAT7-D|ST6GalNAcIV|Siat7d ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 protein-coding common_peak1_145_1067_0.148235405884432_10.1348136346298_1.62216214111488 chr5 33334662 33336304 + 1.62216214111488 NA promoter-TSS (NM_021500) promoter-TSS (NM_021500) -89 NM_021500 59003 Mm.138617 NM_021500 ENSMUSG00000079562 Maea 1110030D19Rik|EMP|Gid9 macrophage erythroblast attacher protein-coding common_peak2_137_1224_-0.149358402456782_10.1838868326615_1.62192371203298 chr6 142386212 142388094 + 1.62192371203298 NA promoter-TSS (NM_023042) promoter-TSS (NM_023042) -66 NM_023042 19691 Mm.27407 NM_023042 ENSMUSG00000030243 Recql RecQ1 RecQ protein-like protein-coding common_peak1_15_51_0.595813544984076_5.99834649063313_1.62091282503239-2 chr9 32659387 32659830 + 1.62091282503239 NA Intergenic Intergenic -36434 NM_011808 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_15_51_0.595813544984076_5.99834649063313_1.62091282503239 chr19 60951310 60951748 + 1.62091282503239 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 61780 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding common_peak2_40_197_0.332086644985816_7.79539994257252_1.62054505685645 chr8 25719866 25720714 + 1.62054505685645 NA TTS (NM_001081269) TTS (NM_001081269) 242 NR_121643 71910 Mm.385055 NM_028000 ENSMUSG00000031570 Plpp5 1810019D05Rik|2310022A04Rik|AW045471|Ppapdc1|Ppapdc1b phospholipid phosphatase 5 protein-coding common_peak2_92_775_-0.189096121299537_9.50536478153736_1.61974437087936 chr6 86732407 86734152 + 1.61974437087936 NA promoter-TSS (NM_011818) promoter-TSS (NM_011818) 99 NM_011818 23885 Mm.321452 NM_011818 ENSMUSG00000001157 Gmcl1 2810049L19Rik|Btbd13|DIP|Gcl|Gcl-1|glc-1|mglc-1 germ cell-less, spermatogenesis associated 1 protein-coding common_peak2_352_3292_0.0860804140646145_11.7282270036277_1.61969146060522 chr17 87341594 87346797 + 1.61969146060522 NA intron (NM_028639, intron 14 of 19) intron (NM_028639, intron 14 of 19) 61309 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak2_64_369_0.245533059816584_8.6541479904246_1.61954048527967 chr13 63567156 63568596 + 1.61954048527967 NA Intergenic CpG -2356 NM_008957 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes patched 1 protein-coding common_peak2_57_316_0.266936595559518_8.44180732791917_1.61922447897299 chr4 130045034 130046606 + 1.61922447897299 NA Intergenic Intergenic -2020 NM_028266 107581 Mm.41860 NM_028266 ENSMUSG00000040690 Col16a1 2700007F12Rik|A530052M23Rik|AI838662|CA1F collagen, type XVI, alpha 1 protein-coding common_peak1_45_231_0.307092120152293_8.01152705520372_1.61822391931675 chr4 46593203 46594004 + 1.61822391931675 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) 8326 NM_001164804 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak2_33_152_0.372760729467875_7.44376820742659_1.61764599484946-3 chr7 45830464 45831257 + 1.61764599484946 NA promoter-TSS (NM_153419) promoter-TSS (NM_153419) -71 NM_153419 101612 Mm.274847 NM_153419 ENSMUSG00000053801 Grwd1 A301|AI504353|Grwd|Wdr28 glutamate-rich WD repeat containing 1 protein-coding common_peak2_33_152_0.372760729467875_7.44376820742659_1.61764599484946-2 chr5 104982202 104983175 + 1.61764599484946 NA promoter-TSS (NM_030239) promoter-TSS (NM_030239) 29 NM_030239 27405 Mm.389663 NM_030239 ENSMUSG00000029299 Abcg3 Abcp2|Mxr2 ATP-binding cassette, sub-family G (WHITE), member 3 protein-coding common_peak2_33_152_0.372760729467875_7.44376820742659_1.61764599484946 chr2 34953910 34955272 + 1.61764599484946 NA intron (NM_009421, intron 6 of 10) intron (NM_009421, intron 6 of 10) 7181 NM_009421 22029 Mm.239514 NM_009421 ENSMUSG00000026875 Traf1 4732496E14Rik TNF receptor-associated factor 1 protein-coding common_peak1_40_307_-0.305343275629476_8.11411490288016_1.61724216354823 chr11 31870186 31870796 + 1.61724216354823 NA promoter-TSS (NM_026252) promoter-TSS (NM_026252) -449 NM_001290676 67579 Mm.339792 NM_026252 ENSMUSG00000020300 Cpeb4 Cpe-bp4|Cpeb-4|mCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding common_peak1_64_515_-0.234312735090358_8.89407088787808_1.61714373389986 chr3 127836862 127837951 + 1.61714373389986 NA promoter-TSS (NM_145964) promoter-TSS (NM_145964) 86 NM_145964 211556 Mm.403486 NM_145964 ENSMUSG00000074238 Ap1ar AA407621|C78909|Gadkin adaptor-related protein complex 1 associated regulatory protein protein-coding common_peak2_99_842_-0.180149006432988_9.62931431772559_1.61679999878353 chr5 150599301 150601782 + 1.61679999878353 NA Intergenic Intergenic -6016 NM_133898 100637 Mm.279932 NM_133898 ENSMUSG00000041132 N4bp2l1 2410024N18Rik|AI428195|B230342M21Rik NEDD4 binding protein 2-like 1 protein-coding common_peak1_57_452_-0.24809161434731_8.69932143287258_1.61671847906173 chr4 43655884 43656850 + 1.61671847906173 NA promoter-TSS (NM_026871) promoter-TSS (NM_026871) 78 NM_026871 68917 Mm.25285 NM_026871 ENSMUSG00000028470 Hint2 1190005L05Rik histidine triad nucleotide binding protein 2 protein-coding common_peak2_89_568_0.200506106444406_9.25253789552879_1.61637316719167 chr16 31274322 31275470 + 1.61637316719167 NA exon (NM_025800, exon 1 of 6) exon (NM_025800, exon 1 of 6) 381 NM_025800 66849 Mm.291593 NM_025800 ENSMUSG00000047714 Ppp1r2 0610025N14Rik|2310007G06Rik|4930440J04Rik|5430408E15Rik|D16Ertd248e|IPP-2 protein phosphatase 1, regulatory (inhibitor) subunit 2 protein-coding common_peak1_89_568_0.200506106444406_9.25253789552879_1.61637316719167 chr15 99394870 99396418 + 1.61637316719167 NA intron (NM_001171036, intron 2 of 10) intron (NM_001171036, intron 2 of 10) 2425 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak1_219_2114_-0.111926307248684_10.990478794383_1.61613437145777 chr7 66195720 66197423 + 1.61613437145777 NA Intergenic Intergenic 87056 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_94_610_0.193441220456481_9.35174918004697_1.61604218767467 chr11 30985762 30987302 + 1.61604218767467 NA promoter-TSS (NM_001290667) promoter-TSS (NM_001290667) -167 NM_001290667 68044 Mm.32656 NM_026527 ENSMUSG00000020309 Chac2 - ChaC, cation transport regulator 2 protein-coding common_peak1_67_542_-0.228047504457479_8.97078463557562_1.61559331067136 chr4 52438547 52439488 + 1.61559331067136 NA promoter-TSS (NR_045175) promoter-TSS (NR_045175) -53 NR_045175 72648 Mm.391869 NR_045175 ENSMUSG00000085763 Smc2os 2700081L22Rik structural maintenance of chromosomes 2, opposite strand ncRNA common_peak1_45_349_-0.286137996552464_8.3081421135561_1.61556005697433 chr8 57488002 57488760 + 1.61556005697433 NA promoter-TSS (NM_021788) promoter-TSS (NM_021788) 418 NR_126555 78353 Mm.426240 NR_126553 ENSMUSG00000096917 2500002B13Rik - RIKEN cDNA 2500002B13 gene ncRNA common_peak1_670_7383_0.0577140265290481_12.8790438509103_1.61547272885895 chr1 134096083 134100187 + 1.61547272885895 NA Intergenic Intergenic -13107 NM_001284524 71884 Mm.328268 NM_027979 ENSMUSG00000026450 Chit1 2300002L19Rik chitinase 1 (chitotriosidase) protein-coding common_peak1_128_1131_-0.15479655642465_10.0672599646196_1.6154489199076 chr4 6471829 6473541 + 1.6154489199076 NA Intergenic Intergenic -18414 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding unique_peak2_15_113_-0.536636751039573_6.56457163864495_1.61535757763815 chr11 80476679 80477535 + 1.61535757763815 NA promoter-TSS (NM_009871) promoter-TSS (NM_009871) 61 NM_009871 12569 Mm.142275 NM_009871 ENSMUSG00000048895 Cdk5r1 Cdk5r|D11Bwg0379e|p25|p35 cyclin-dependent kinase 5, regulatory subunit 1 (p35) protein-coding common_peak1_15_113_-0.536636751039573_6.56457163864495_1.61535757763815 chr7 24546557 24546969 + 1.61535757763815 NA promoter-TSS (NM_009532) promoter-TSS (NM_009532) -387 NM_009532 22594 Mm.4347 NM_009532 ENSMUSG00000051768 Xrcc1 Xrcc-1 X-ray repair complementing defective repair in Chinese hamster cells 1 protein-coding common_peak2_15_113_-0.536636751039573_6.56457163864495_1.61535757763815 chr15 93827025 93827308 + 1.61535757763815 NA Intergenic Lx3_Mus|LINE|L1 99945 NR_045737 77248 Mm.410768 NR_045737 9430014N10Rik - RIKEN cDNA 9430014N10 gene ncRNA common_peak1_115_1000_-0.165338321950712_9.88455709786064_1.6150523415854 chrX 167145528 167147651 + 1.6150523415854 NA Intergenic Intergenic 62629 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_89_746_-0.19217348403825_9.44887769077011_1.6147866743864 chr11 52264610 52265799 + 1.6147866743864 NA intron (NM_001313981, intron 3 of 10) intron (NM_001313981, intron 3 of 10) 17391 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak2_166_1529_-0.132569331892055_10.513031271634_1.61468546386277 chr1 160905760 160907881 + 1.61468546386277 NA intron (NM_001024952, intron 1 of 19) CpG 409 NM_001024952 381305 Mm.329667 NM_001024952 ENSMUSG00000040423 Rc3h1 5730557L09Rik|Gm551|N28103|mKIAA2025 RING CCCH (C3H) domains 1 protein-coding common_peak1_49_259_0.290259690294286_8.1674976581756_1.61335635501772 chr1 39842453 39843411 + 1.61335635501772 NA intron (NR_040465, intron 4 of 4) (T)n|Simple_repeat|Simple_repeat 4398 NR_040465 73426 Mm.396239 NR_040465 ENSMUSG00000101634 1700066B17Rik - RIKEN cDNA 1700066B17 gene ncRNA common_peak2_101_861_-0.177260970775286_9.66291357370146_1.61315684270337 chr1 91097768 91100355 + 1.61315684270337 NA intron (NM_001310732, intron 12 of 24) intron (NM_001310732, intron 12 of 24) 45617 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_108_930_-0.170895122029158_9.77718979654422_1.61294598516118 chr1 156673297 156675462 + 1.61294598516118 NA promoter-TSS (NM_023141) promoter-TSS (NM_023141) -40 NM_023141 30935 Mm.206737 NM_023141 ENSMUSG00000060519 Tor3a Adir torsin family 3, member A protein-coding common_peak2_78_478_0.218217245377136_9.01299046842475_1.61169176455508 chr13 25019481 25020967 + 1.61169176455508 NA promoter-TSS (NM_001013389) promoter-TSS (NM_001013389) 93 NM_001013389 380836 Mm.387097 NM_001013389 ENSMUSG00000021339 Mrs2 Gm902|HPT|Mrs2l|RPT MRS2 magnesium transporter protein-coding common_peak2_60_339_0.25512851490927_8.53695519359234_1.61122089103748 chr5 115237380 115238558 + 1.61122089103748 NA 5' UTR (NM_026398, exon 2 of 6) 5' UTR (NM_026398, exon 2 of 6) 2118 NM_026398 117109 Mm.24636 NM_026398 ENSMUSG00000060152 Pop5 1500019J17Rik|2700077E03Rik|AW049989|Rnasep3 processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae) protein-coding common_peak2_152_1134_0.143328711102463_10.2201409377295_1.61101224500443 chr3 157533719 157535387 + 1.61101224500443 NA intron (NM_017381, intron 1 of 9) CpG 156 NM_017381 53861 Mm.259036 NM_017381 ENSMUSG00000028180 Zranb2 AI227013|Zfp265|Zis|Znf265 zinc finger, RAN-binding domain containing 2 protein-coding common_peak2_86_717_-0.195042203157199_9.39031893224445_1.61070972599474 chr5 88564431 88566230 + 1.61070972599474 NA exon (NM_001289775, exon 1 of 13) exon (NM_001289775, exon 1 of 13) 290 NM_001289775 52822 Mm.270469 NM_027530 ENSMUSG00000029291 Rufy3 2810428M05Rik|6330416M07Rik|AW455998|AW538594|D5Bwg0860e|Ripx|Rpipx RUN and FYVE domain containing 3 protein-coding common_peak1_175_1625_-0.127476865822008_10.603373109164_1.6106840899406 chr17 35869330 35871240 + 1.6106840899406 NA intron (NM_001146710, intron 2 of 3) intron (NM_001146710, intron 2 of 3) 3670 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding common_peak2_175_1625_-0.127476865822008_10.603373109164_1.6106840899406 chr4 132352704 132355085 + 1.6106840899406 NA promoter-TSS (NR_003270) promoter-TSS (NR_003270) -208 NR_003270 399101 Mm.486919 NR_002904 ENSMUSG00000085241 Snhg3 Rnu17d|U17HG small nucleolar RNA host gene 3 ncRNA common_peak1_119_1040_-0.161873298329001_9.94281770413492_1.61064085895065 chr5 105718392 105719421 + 1.61064085895065 NA intron (NM_178701, intron 1 of 2) B1_Mus1|SINE|Alu 18096 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_78_642_-0.206575836214631_9.22538700922063_1.61062599322839 chr9 21265259 21266114 + 1.61062599322839 NA exon (NM_153583, exon 1 of 10) exon (NM_153583, exon 1 of 10) 401 NM_153583 235040 Mm.440165 NM_153583 ENSMUSG00000002820 Atg4d 9830134P12Rik|APG4-D|Apg4d|Atg4dl|Autl4 autophagy related 4D, cysteine peptidase protein-coding common_peak1_289_2568_0.0963900376764268_11.375186193739_1.61033020176664 chr18 35887224 35889842 + 1.61033020176664 NA Intergenic CpG 58715 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding unique_peak2_32_146_0.377647602824515_7.38849614624862_1.60975202962834 chr19 9022291 9023544 + 1.60975202962834 NA intron (NR_104460, intron 4 of 6) L1MC4|LINE|L1 5013 NR_105786 102465190 NR_105786 ENSMUSG00000099308 Mir6367 Gm27467|mmu-mir-6367 microRNA 6367 ncRNA common_peak2_418_4088_0.077054082790319_12.0360593889215_1.60973058842139 chr4 138453375 138457535 + 1.60973058842139 NA intron (NM_025451, intron 1 of 1) CpG-10550 307 NM_025451 66259 Mm.41603 NM_025451 ENSMUSG00000046447 Camk2n1 1810006K23Rik|AI848599|AI891706 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding common_peak2_44_224_0.312397446347594_7.96997991439083_1.60955015170104 chr19 41369335 41370817 + 1.60955015170104 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 14994 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak1_44_224_0.312397446347594_7.96997991439083_1.60955015170104-2 chr5 124028111 124028920 + 1.60955015170104 NA intron (NM_177876, intron 1 of 3) B1_Mm|SINE|Alu 3745 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_44_224_0.312397446347594_7.96997991439083_1.60955015170104 chr2 92433488 92434117 + 1.60955015170104 NA intron (NM_009963, intron 1 of 11) intron (NM_009963, intron 1 of 11) 267 NM_009963 12953 Mm.254181 NM_009963 ENSMUSG00000068742 Cry2 AV006279|D130054K12Rik cryptochrome 2 (photolyase-like) protein-coding common_peak2_121_846_0.16491360290113_9.80867496078276_1.60948149660437 chr14 29977844 29979272 + 1.60948149660437 NA exon (NM_027493, exon 1 of 13) exon (NM_027493, exon 1 of 13) 221 NM_027493 56249 Mm.215110 NM_027493 ENSMUSG00000015971 Actr8 5730542K05Rik|ARP8 ARP8 actin-related protein 8 protein-coding common_peak2_121_846_0.16491360290113_9.80867496078276_1.60948149660437-2 chr15 10485232 10486934 + 1.60948149660437 NA promoter-TSS (NM_001289447) promoter-TSS (NM_001289447) 45 NM_001289447 19355 Mm.38376 NM_011232 ENSMUSG00000022248 Rad1 mRAD1 RAD1 checkpoint DNA exonuclease protein-coding common_peak2_75_454_0.223866090683545_8.94165578042783_1.60943657592326 chr3 88509099 88510119 + 1.60943657592326 NA Intergenic MIRc|SINE|MIR -6257 NM_001002011 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_220_2125_-0.1113847054821_10.9982335287901_1.60906216579666 chr4 44020716 44024375 + 1.60906216579666 NA intron (NM_016760, intron 3 of 5) intron (NM_016760, intron 3 of 5) 9895 NM_001290470 12757 Mm.298875 NM_016760 ENSMUSG00000028478 Clta AV026556|Lca clathrin, light polypeptide (Lca) protein-coding common_peak2_75_614_-0.210853774456998_9.1590157129981_1.60866336194585 chr4 43039099 43040437 + 1.60866336194585 NA intron (NR_045567, intron 1 of 7) intron (NR_045567, intron 1 of 7) 533 NM_001253353 230088 Mm.260162 NM_172691 ENSMUSG00000036002 Fam214b B230312A22Rik family with sequence similarity 214, member B protein-coding common_peak2_279_2456_0.0986005057204391_11.3119823952224_1.60856814530578 chr2 91081346 91084735 + 1.60856814530578 NA Intergenic Intergenic -12725 NM_001290765 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding common_peak2_32_242_-0.347492555944902_7.75106622563333_1.60845070874107 chr13 45923691 45925269 + 1.60845070874107 NA intron (NM_009124, intron 2 of 7) intron (NM_009124, intron 2 of 7) 40511 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_39_191_0.332784038095976_7.75135451976914_1.60845070874107 chr17 34180165 34180977 + 1.60845070874107 NA Intergenic Intergenic 6759 NM_013585 16912 Mm.390983 NM_013585 ENSMUSG00000096727 Psmb9 Lmp-2|Lmp2 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) protein-coding common_peak2_360_3388_0.0842804669300428_11.768784154949_1.6084250391682 chr1 131095345 131098468 + 1.6084250391682 NA intron (NM_008551, intron 1 of 9) CpG 937 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding common_peak1_103_881_-0.175988978543877_9.69664035628558_1.60836123565727 chr2 130629248 130630274 + 1.60836123565727 NA intron (NM_198176, intron 1 of 2) CpG 266 NM_198176 380601 Mm.27090 NM_198176 ENSMUSG00000079043 Fastkd5 C78212|mKIAA1792 FAST kinase domains 5 protein-coding common_peak2_123_864_0.163350504582931_9.83823157481555_1.60782723595319 chr6 56900552 56902699 + 1.60782723595319 NA intron (NM_001252374, intron 1 of 9) intron (NM_001252374, intron 1 of 9) 261 NM_001252374 107569 Mm.158936 NM_026004 ENSMUSG00000029780 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III protein-coding common_peak2_112_969_-0.16632143890209_9.83868021762344_1.60782723595319 chr2 91729890 91731114 + 1.60782723595319 NA intron (NM_001080754, intron 1 of 18) intron (NM_001080754, intron 1 of 18) 364 NM_001080754 228361 Mm.436667 NM_172669 ENSMUSG00000040506 Ambra1 2310079H06Rik|A130023A14|AA474864|AV021921|D030051N19Rik|mKIAA1736 autophagy/beclin 1 regulator 1 protein-coding common_peak1_39_299_-0.311072151678749_8.07328261465651_1.60754110349267-2 chr8 105965570 105966154 + 1.60754110349267 NA intron (NM_009195, intron 1 of 23) CpG 253 NM_001253804 20498 Mm.292447 NM_009195 ENSMUSG00000017765 Slc12a4 AW546649|KCC1|RBCKCC1 solute carrier family 12, member 4 protein-coding common_peak1_39_299_-0.311072151678749_8.07328261465651_1.60754110349267 chr7 98693633 98694356 + 1.60754110349267 NA Intergenic B1_Mur2|SINE|Alu -9369 NM_028410 72981 Mm.4428 NM_028410 ENSMUSG00000030753 Thap12 2900052B10Rik|Dap4|Prkrir|Rpkrir THAP domain containing 12 protein-coding unique_peak2_39_299_-0.311072151678749_8.07328261465651_1.60754110349267 chr13 85498492 85500165 + 1.60754110349267 NA Intergenic Intergenic -209842 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak1_56_309_0.268374314275935_8.41031156241221_1.60710792969475 chr14 62837490 62838240 + 1.60710792969475 NA TTS (NR_106174) TTS (NR_106174) 144 NR_106174 102465889 NR_106174 ENSMUSG00000099245 Mir8098 Gm27462|mmu-mir-8098 microRNA 8098 ncRNA common_peak2_56_309_0.268374314275935_8.41031156241221_1.60710792969475 chr7 25618887 25620021 + 1.60710792969475 NA promoter-TSS (NM_025504) promoter-TSS (NM_025504) -39 NM_025504 66349 Mm.159956 NM_025504 ENSMUSG00000057229 Atp5sl 2310004L02Rik|C030044E10Rik ATP5S-like protein-coding common_peak1_211_2023_-0.114027186878486_10.9259799812551_1.60709450932953 chr17 34030837 34032625 + 1.60709450932953 NA promoter-TSS (NM_008202) promoter-TSS (NM_008202) -41 NM_008202 14977 Mm.18556 NM_008202 ENSMUSG00000024327 Slc39a7 AA408174|AI117660|AL024048|H-2Ke4|H2-Ke4|Ke-4|Ke4|Ring5|Zip7 solute carrier family 39 (zinc transporter), member 7 protein-coding common_peak1_56_443_-0.249917146799932_8.66945729295014_1.60658189578218-2 chr16 32247211 32247689 + 1.60658189578218 NA promoter-TSS (NM_173439) promoter-TSS (NM_173439) 197 NM_026898 68980 Mm.159860 NM_026898 ENSMUSG00000022787 Wdr53 1500002B03Rik|AI848860 WD repeat domain 53 protein-coding common_peak1_56_443_-0.249917146799932_8.66945729295014_1.60658189578218 chr12 112867780 112868616 + 1.60658189578218 NA Intergenic Intergenic -7282 NM_019925 56696 Mm.20455 NM_019925 ENSMUSG00000021298 Gpr132 G2a G protein-coupled receptor 132 protein-coding common_peak1_398_3844_0.0792669459664541_11.9484013558324_1.6064959201295 chr6 38532572 38535731 + 1.6064959201295 NA promoter-TSS (NM_025363) promoter-TSS (NM_025363) -710 NM_025363 66117 Mm.158971 NM_025363 ENSMUSG00000019689 Fmc1 1110001J03Rik formation of mitochondrial complex V assembly factor 1 protein-coding common_peak2_295_2635_0.0954859297624271_11.4118776198893_1.60634436124804 chr4 46533928 46537065 + 1.60634436124804 NA intron (NM_029077, intron 1 of 5) intron (NM_029077, intron 1 of 5) 645 NM_029077 74735 Mm.240252 NM_029077 ENSMUSG00000039853 Trim14 5830400N10Rik|pub tripartite motif-containing 14 protein-coding common_peak2_98_644_0.188299113503549_9.42730490706239_1.60596376639953 chr2 28839589 28841059 + 1.60596376639953 NA promoter-TSS (NM_001166033) promoter-TSS (NM_001166033) 36 NM_172977 269252 Mm.26043 NM_172977 ENSMUSG00000035666 Gtf3c4 5330400C03|AI426938|AU014771|AU017413|KAT12|TFIIIC90 general transcription factor IIIC, polypeptide 4 protein-coding common_peak2_83_519_0.208331453142756_9.12653353959983_1.60585614571557-2 chr6 132463622 132463889 + 1.60585614571557 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -99620 NM_053251 114600 Mm.428480 NM_053251 Gm4736 EG114600|Mp4|Mp6 predicted gene 4736 protein-coding common_peak2_83_519_0.208331453142756_9.12653353959983_1.60585614571557 chr13 91635574 91637065 + 1.60585614571557 NA intron (NM_024186, intron 4 of 15) B1_Mur1|SINE|Alu -105202 NM_028790 74156 Mm.275963 NM_028790 ENSMUSG00000021620 Acot12 1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1 acyl-CoA thioesterase 12 protein-coding common_peak1_16_56_0.570646246809431_6.11821313756946_1.60550269793887-3 chr4 130019255 130019661 + 1.60550269793887 NA intron (NM_173071, intron 27 of 29) intron (NM_173071, intron 27 of 29) 27404 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding common_peak1_16_56_0.570646246809431_6.11821313756946_1.60550269793887-2 chr17 87266056 87266489 + 1.60550269793887 NA promoter-TSS (NM_139295) promoter-TSS (NM_139295) -325 NM_139295 193813 Mm.30251 NM_139295 ENSMUSG00000024150 Mcfd2 1810021C21Rik|F5f8d|Lman1ip|Sdnsf multiple coagulation factor deficiency 2 protein-coding unique_peak1_16_56_0.570646246809431_6.11821313756946_1.60550269793887 chr13 107832437 107832844 + 1.60550269793887 NA intron (NM_145456, intron 2 of 14) B3A|SINE|B2 57424 NM_145456 67263 Mm.490418 NM_145456 ENSMUSG00000032846 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak1_16_56_0.570646246809431_6.11821313756946_1.60550269793887 chr11 46303593 46304025 + 1.60550269793887 NA intron (NM_001252459, intron 1 of 30) L1MB8|LINE|L1 8549 NM_001252460 76884 Mm.154358 NM_133769 ENSMUSG00000020340 Cyfip2 1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168 cytoplasmic FMR1 interacting protein 2 protein-coding common_peak1_16_56_0.570646246809431_6.11821313756946_1.60550269793887-4 chr7 138909193 138909621 + 1.60550269793887 NA promoter-TSS (NM_009760) promoter-TSS (NM_009760) 99 NM_009760 12176 Mm.378890 NM_009760 ENSMUSG00000078566 Bnip3 Nip3 BCL2/adenovirus E1B interacting protein 3 protein-coding unique_peak2_16_120_-0.515326976300423_6.66119974912438_1.60499580178026-4 chr9 21161647 21162372 + 1.60499580178026 NA Intergenic Intergenic -3705 NM_183408 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding unique_peak2_16_120_-0.515326976300423_6.66119974912438_1.60499580178026-2 chr17 30509738 30510842 + 1.60499580178026 NA intron (NM_172618, intron 6 of 11) intron (NM_172618, intron 6 of 11) 65997 NM_172618 224671 Mm.41220 NM_027060 ENSMUSG00000062202 Btbd9 1700023F20Rik|4930402L05|AI464421 BTB (POZ) domain containing 9 protein-coding common_peak1_16_120_-0.515326976300423_6.66119974912438_1.60499580178026-2 chr2 68434273 68434759 + 1.60499580178026 NA intron (NM_016866, intron 1 of 17) intron (NM_016866, intron 1 of 17) 37465 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding unique_peak2_16_120_-0.515326976300423_6.66119974912438_1.60499580178026 chr11 109259476 109260659 + 1.60499580178026 NA intron (NM_001165934, intron 8 of 16) intron (NM_001165934, intron 8 of 16) 38114 NM_001165934 19739 Mm.38548 NM_011268 ENSMUSG00000020599 Rgs9 RGS9-1|Rgs9-2 regulator of G-protein signaling 9 protein-coding unique_peak2_16_120_-0.515326976300423_6.66119974912438_1.60499580178026-3 chr8 66312565 66312925 + 1.60499580178026 NA intron (NM_175188, intron 4 of 7) (GAATG)n|Simple_repeat|Simple_repeat -73556 NM_001166375 72925 Mm.380457 NM_175188 ENSMUSG00000036469 March1 2900024D24Rik|BB085186 membrane-associated ring finger (C3HC4) 1 protein-coding common_peak1_16_120_-0.515326976300423_6.66119974912438_1.60499580178026-3 chr6 8650257 8650695 + 1.60499580178026 NA intron (NM_001252266, intron 10 of 11) intron (NM_001252266, intron 10 of 11) 107982 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak1_16_120_-0.515326976300423_6.66119974912438_1.60499580178026 chr14 70333988 70334343 + 1.60499580178026 NA intron (NM_001135151, intron 1 of 9) intron (NM_001135151, intron 1 of 9) 14268 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak1_52_280_0.281315445222186_8.27508404283202_1.60426560560307 chr4 101199207 101200384 + 1.60426560560307 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 65487 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_52_408_-0.260215267498637_8.54584939919243_1.6042050681981 chr8 110969714 110971029 + 1.6042050681981 NA 3' UTR (NM_009179, exon 7 of 7) 3' UTR (NM_009179, exon 7 of 7) 27452 NM_007916 13680 Mm.287901 NM_007916 ENSMUSG00000015023 Ddx19a DBP5|Ddx19|Eif4a-rs1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a protein-coding common_peak1_52_408_-0.260215267498637_8.54584939919243_1.6042050681981 chr16 42919957 42920928 + 1.6042050681981 NA intron (NM_001285805, intron 1 of 10) intron (NM_001285805, intron 1 of 10) -8372 NR_040402 100503040 Mm.490721 NR_040402 Gm19522 - predicted gene, 19522 ncRNA common_peak2_88_560_0.201161408155395_9.23243766468649_1.60409430636208 chr17 27118225 27120468 + 1.60409430636208 NA exon (NM_080553, exon 55 of 58) exon (NM_080553, exon 55 of 58) 14545 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding common_peak2_306_2760_0.0932160993120679_11.4775832222441_1.60395153336479 chr8 80738070 80740583 + 1.60395153336479 NA 5' UTR (NM_053124, exon 1 of 24) 5' UTR (NM_053124, exon 1 of 24) 133 NM_053124 93762 Mm.246803 NM_053124 ENSMUSG00000031715 Smarca5 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding common_peak1_129_919_0.158036780574877_9.92450844123181_1.60324337169154 chr6 108828415 108829941 + 1.60324337169154 NA exon (NM_138677, exon 1 of 12) exon (NM_138677, exon 1 of 12) 537 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding unique_peak2_48_252_0.293882662216374_8.1299349058025_1.60313957458282 chr14 67950857 67952214 + 1.60313957458282 NA Intergenic Intergenic -17963 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding common_peak1_38_290_-0.311931893300422_8.02890939625807_1.60308336878814 chr10 20865338 20865817 + 1.60308336878814 NA Intergenic Intergenic -86970 NM_026203 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak1_38_290_-0.311931893300422_8.02890939625807_1.60308336878814-2 chr2 18676173 18676849 + 1.60308336878814 NA promoter-TSS (NM_007552) promoter-TSS (NM_007552) -507 NM_007552 12151 Mm.289584 NM_007552 ENSMUSG00000026739 Bmi1 AW546694|Bmi-1|Pcgf4 Bmi1 polycomb ring finger oncogene protein-coding common_peak1_31_234_-0.353651372253475_7.69969126043826_1.60287246897154 chr16 92796620 92797317 + 1.60287246897154 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 29106 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_38_184_0.341561989091549_7.70216245506209_1.60287246897154 chr1 153739670 153741255 + 1.60287246897154 NA 5' UTR (NM_011267, exon 1 of 5) 5' UTR (NM_011267, exon 1 of 5) 109 NM_011267 19734 Mm.181709 NM_011267 ENSMUSG00000026475 Rgs16 Rgs14|Rgsr regulator of G-protein signaling 16 protein-coding common_peak2_38_184_0.341561989091549_7.70216245506209_1.60287246897154-2 chr8 76898734 76899767 + 1.60287246897154 NA intron (NR_028579, intron 1 of 1) intron (NR_028579, intron 1 of 1) 923 NR_028579 100039211 Mm.367571 NR_028579 ENSMUSG00000074235 Gm10649 ENSMUSG00000074235 predicted gene 10649 ncRNA common_peak2_131_1161_-0.151849783370938_10.1064694617191_1.60283027447423 chr5 31192286 31194238 + 1.60283027447423 NA promoter-TSS (NM_153680) promoter-TSS (NM_153680) -42 NM_153680 266781 Mm.6118 NM_153680 ENSMUSG00000029146 Snx17 5830447M19Rik|AI790646|D5Ertd260e|b2b1625.1Clo|mKIAA0064 sorting nexin 17 protein-coding unique_peak2_31_140_0.38331422191273_7.33120846335516_1.6025697125596 chr7 100868400 100869267 + 1.6025697125596 NA TTS (NM_001081116) TTS (NM_001081116) -5420 NM_177073 320100 Mm.40336 NM_177073 ENSMUSG00000008318 Relt E430021K24Rik|Tnfrsf19l RELT tumor necrosis factor receptor protein-coding common_peak1_31_140_0.38331422191273_7.33120846335516_1.6025697125596-2 chr17 35231298 35231904 + 1.6025697125596 NA intron (NM_010909, intron 2 of 3) B1_Mur4|SINE|Alu 4214 NM_010909 18038 Mm.300795 NM_010909 ENSMUSG00000042419 Nfkbil1 Def-7|IKBL nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 protein-coding common_peak2_31_140_0.38331422191273_7.33120846335516_1.6025697125596 chr3 107076294 107077312 + 1.6025697125596 NA Intergenic Intergenic -24764 NM_008417 16490 Mm.39285 NM_008417 ENSMUSG00000040724 Kcna2 Akr6a4|ENSMUSG00000074335|Gm10672|Kca1-2|Kv1.2|Mk-2 potassium voltage-gated channel, shaker-related subfamily, member 2 protein-coding common_peak1_31_140_0.38331422191273_7.33120846335516_1.6025697125596 chr11 69118342 69118844 + 1.6025697125596 NA Intergenic Intergenic -1860 NM_033041 84653 Mm.98505 NM_033041 ENSMUSG00000023781 Hes7 bHLHb37 hairy and enhancer of split 7 (Drosophila) protein-coding common_peak2_133_955_0.156289203355332_9.97901140965841_1.60240709731976 chr9 122116909 122118423 + 1.60240709731976 NA intron (NM_001164572, intron 1 of 5) CpG 400 NM_133741 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak2_233_2273_-0.107326261944747_11.0973534079199_1.60123753372547 chr6 72615223 72617834 + 1.60123753372547 NA intron (NM_009443, intron 1 of 3) CpG 220 NM_009444 22135 Mm.246563 NM_009444 Tgoln2 TGN38B|TGN41|TGN46|Ttgn2 trans-golgi network protein 2 protein-coding common_peak1_80_495_0.212145772606004_9.06026919668988_1.60106740160367 chr7 66134683 66135910 + 1.60106740160367 NA intron (NM_001081163, intron 2 of 2) B1F2|SINE|Alu 25781 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_283_2859_-0.095415263446025_11.4340917999427_1.60053892736057 chr4 141537368 141539988 + 1.60053892736057 NA promoter-TSS (NM_019763) promoter-TSS (NM_019763) -81 NM_019763 56381 Mm.299906 NM_019763 ENSMUSG00000040761 Spen Mint|mKIAA0929 SPEN homolog, transcriptional regulator (Drosophila) protein-coding unique_peak2_9_70_-0.685225203060263_5.80713451797455_1.60007701539021-2 chr16 92873598 92874178 + 1.60007701539021 NA Intergenic Intergenic -47814 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_9_70_-0.685225203060263_5.80713451797455_1.60007701539021-3 chr5 105197709 105198265 + 1.60007701539021 NA Intergenic RMER17C|LTR|ERVK 41546 NM_001039646 626578 Mm.275893 NM_001039646 ENSMUSG00000105096 Gbp10 - guanylate-binding protein 10 protein-coding unique_peak2_9_70_-0.685225203060263_5.80713451797455_1.60007701539021 chr14 78900459 78901022 + 1.60007701539021 NA intron (NM_173758, intron 2 of 25) intron (NM_173758, intron 2 of 25) 51562 NM_173758 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding common_peak1_109_939_-0.168613616992728_9.79221013806864_1.59962700690102 chr5 32745833 32747391 + 1.59962700690102 NA intron (NM_177298, intron 3 of 7) intron (NM_177298, intron 3 of 7) 39014 NM_177298 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding common_peak1_151_1125_0.143210024875728_10.2085961245181_1.59960178607936 chr2 13412439 13413663 + 1.59960178607936 NA intron (NM_001081084, intron 27 of 66) PB1D10|SINE|Alu 78825 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak1_30_226_-0.359866282556609_7.64661534601261_1.59796004673382 chr13 22035710 22036288 + 1.59796004673382 NA promoter-TSS (NM_175659) promoter-TSS (NM_175659) 178 NM_175665 319184 Mm.358955 NM_175665 ENSMUSG00000062727 Hist1h2bk - histone cluster 1, H2bk protein-coding unique_peak2_17_127_-0.495314638127333_6.75234268093633_1.59789270723402-2 chrX 53269163 53269884 + 1.59789270723402 NA 5' UTR (NM_001166583, exon 1 of 9) 5' UTR (NM_001166583, exon 1 of 9) 282 NM_030167 78755 Mm.28559 NM_030167 ENSMUSG00000036022 Fam122b 4632404H22Rik|AI256344|SPACIA2 family with sequence similarity 122, member B protein-coding common_peak1_17_127_-0.495314638127333_6.75234268093633_1.59789270723402 chr3 100969243 100969709 + 1.59789270723402 NA exon (NM_001013026, exon 2 of 23) exon (NM_001013026, exon 2 of 23) 187 NM_001013026 74044 Mm.270961 NM_001013026 ENSMUSG00000033222 Ttf2 4632434F22Rik|8030447N19|AV218430 transcription termination factor, RNA polymerase II protein-coding unique_peak2_17_127_-0.495314638127333_6.75234268093633_1.59789270723402 chr1 39748989 39749995 + 1.59789270723402 NA Intergenic Intergenic -28503 NM_001145660 619289 Mm.334107 NM_001145660 ENSMUSG00000057173 Rfx8 4933400N17Rik regulatory factor X 8 protein-coding common_peak1_183_1712_-0.124011698431421_10.6803035868683_1.59742951665533 chr2 69860745 69862723 + 1.59742951665533 NA 5' UTR (NM_009278, exon 1 of 12) 5' UTR (NM_009278, exon 1 of 12) 172 NM_009278 20823 Mm.10508 NM_009278 ENSMUSG00000068882 Ssb SS-B Sjogren syndrome antigen B protein-coding common_peak1_43_332_-0.292968313190954_8.23289421047578_1.59742213658705-2 chr7 43562245 43562925 + 1.59742213658705 NA intron (NM_001008549, intron 1 of 4) intron (NM_001008549, intron 1 of 4) 215 NM_001008549 210104 Mm.333821 NM_001008549 ENSMUSG00000056592 Zfp658 - zinc finger protein 658 protein-coding common_peak1_43_332_-0.292968313190954_8.23289421047578_1.59742213658705 chr6 28480272 28480978 + 1.59742213658705 NA exon (NM_019776, exon 1 of 24) exon (NM_019776, exon 1 of 24) 277 NM_019776 56463 Mm.439987 NM_019776 ENSMUSG00000001424 Snd1 AL033314|Tudor-SN staphylococcal nuclease and tudor domain containing 1 protein-coding common_peak1_55_434_-0.251694529531809_8.63902432597019_1.59655799434867 chr2 174463409 174464194 + 1.59655799434867 NA intron (NM_025983, intron 1 of 2) intron (NM_025983, intron 1 of 2) 300 NM_025983 67126 Mm.20841 NM_025983 ENSMUSG00000016252 Atp5e 2410043G19Rik|ATPE|AV000645 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit protein-coding common_peak1_111_757_0.173735334219545_9.65292170528086_1.59555148000016 chr12 31350521 31351673 + 1.59555148000016 NA intron (NM_007861, intron 1 of 13) CpG 374 NM_007861 13382 Mm.3131 NM_007861 ENSMUSG00000020664 Dld - dihydrolipoamide dehydrogenase protein-coding common_peak1_17_61_0.550489051485792_6.22944083612977_1.59525060585999-5 chr6 108844499 108845022 + 1.59525060585999 NA intron (NM_138677, intron 4 of 11) B1F|SINE|Alu 16119 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding common_peak1_17_61_0.550489051485792_6.22944083612977_1.59525060585999-4 chr5 62723023 62723456 + 1.59525060585999 NA intron (NM_178407, intron 6 of 32) intron (NM_178407, intron 6 of 32) 42938 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_17_61_0.550489051485792_6.22944083612977_1.59525060585999-2 chr14 56240637 56241021 + 1.59525060585999 NA Intergenic Intergenic -6172 NM_010371 14940 Mm.14465 NM_010371 ENSMUSG00000079186 Gzmc AI323531|B10|CCP2|Ctla-5|Ctla5 granzyme C protein-coding common_peak1_17_61_0.550489051485792_6.22944083612977_1.59525060585999-3 chr4 83534698 83535180 + 1.59525060585999 NA intron (NM_001081012, intron 1 of 25) intron (NM_001081012, intron 1 of 25) 9394 NM_001081012 320226 Mm.180032 NM_029117 ENSMUSG00000052407 Ccdc171 4930418J05Rik|4930473A06Rik|A330015D16Rik coiled-coil domain containing 171 protein-coding common_peak1_17_61_0.550489051485792_6.22944083612977_1.59525060585999 chr1 166381439 166381931 + 1.59525060585999 NA intron (NM_030245, intron 1 of 7) intron (NM_030245, intron 1 of 7) 2518 NM_030245 27878 Mm.100665 NM_030245 ENSMUSG00000026563 Tada1 2900026B15Rik|D1Ertd251e|Staf42|Tada1l transcriptional adaptor 1 protein-coding unique_peak2_12_91_-0.594753022602436_6.22618544475579_1.59525060585998 chr11 83117848 83118738 + 1.59525060585998 NA intron (NM_011407, intron 1 of 1) intron (NM_011407, intron 1 of 1) 1448 NM_011407 20555 Mm.10948 NM_011407 ENSMUSG00000078763 Slfn1 AV316259 schlafen 1 protein-coding unique_peak2_12_91_-0.594753022602436_6.22618544475579_1.59525060585998-2 chr4 133906782 133907366 + 1.59525060585998 NA Intergenic B1_Mur4|SINE|Alu -19277 NM_009097 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak1_55_302_0.27000307773133_8.37817552233862_1.59509818087428 chr12 104987138 104987790 + 1.59509818087428 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 11213 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_68_550_-0.223313188324363_8.99425191440898_1.59497263511091 chr14 40948014 40949358 + 1.59497263511091 NA promoter-TSS (NM_001316748) promoter-TSS (NM_001316748) -477 NM_001316748 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding common_peak1_71_423_0.229989529682181_8.84291521940429_1.59492544872478 chr2 38536646 38537852 + 1.59492544872478 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 25373 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak2_37_282_-0.317681728248636_7.98581737870756_1.59406470811908 chr10 75433391 75434702 + 1.59406470811908 NA intron (NM_133995, intron 6 of 9) (TAGA)n|Simple_repeat|Simple_repeat -15464 NR_045841 71125 Mm.399516 NR_045841 4933407G14Rik - RIKEN cDNA 4933407G14 gene ncRNA common_peak1_37_282_-0.317681728248636_7.98581737870756_1.59406470811908-2 chr17 83847765 83848432 + 1.59406470811908 NA Intergenic Intergenic -1308 NM_025325 107766 Mm.30100 NM_025325 ENSMUSG00000000673 Haao 0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding common_peak1_37_282_-0.317681728248636_7.98581737870756_1.59406470811908 chr1 74227018 74228006 + 1.59406470811908 NA Intergenic Intergenic -9038 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak1_29_218_-0.366130627003471_7.59172174609944_1.59379102284668 chr6 29272706 29273141 + 1.59379102284668 NA intron (NM_023516, intron 1 of 1) CpG 297 NM_023516 69573 Mm.45161 NM_023516 ENSMUSG00000043421 Hilpda 2310016C08Rik|AW049004|Hig2 hypoxia inducible lipid droplet associated protein-coding common_peak2_29_218_-0.366130627003471_7.59172174609944_1.59379102284668-2 chr2 127008441 127009590 + 1.59379102284668 NA intron (NM_175550, intron 1 of 20) CpG 304 NM_175550 108011 Mm.134045 NM_175550 ENSMUSG00000001998 Ap4e1 2310033A20Rik|9930028M04Rik|AV087807 adaptor-related protein complex AP-4, epsilon 1 protein-coding common_peak2_29_218_-0.366130627003471_7.59172174609944_1.59379102284668 chr11 72998262 72999516 + 1.59379102284668 NA promoter-TSS (NM_008771) promoter-TSS (NM_008771) -256 NM_008771 18436 Mm.25722 NM_008771 ENSMUSG00000020787 P2rx1 AI323649|BB122383|P2x|Pdcd3|RP-2 purinergic receptor P2X, ligand-gated ion channel, 1 protein-coding common_peak1_18_134_-0.476451393653941_6.83858990022386_1.59349284366831 chr2 28699919 28700348 + 1.59349284366831 NA promoter-TSS (NM_001033874) promoter-TSS (NM_001033874) -28 NM_001033874 68870 Mm.273318 NM_001033874 ENSMUSG00000026807 Ak8 1190002A17Rik|AK 8 adenylate kinase 8 protein-coding common_peak1_18_134_-0.476451393653941_6.83858990022386_1.59349284366831-2 chr3 103864799 103865251 + 1.59349284366831 NA intron (NR_104070, intron 3 of 22) intron (NR_104070, intron 3 of 22) 4748 NM_008979 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding common_peak1_18_134_-0.476451393653941_6.83858990022386_1.59349284366831-3 chr6 52640500 52640934 + 1.59349284366831 NA promoter-TSS (NM_145567) promoter-TSS (NM_145567) -417 NM_145567 58875 Mm.286458 NM_145567 ENSMUSG00000029776 Hibadh 6430402H10Rik|AI265272 3-hydroxyisobutyrate dehydrogenase protein-coding common_peak2_87_726_-0.192789188852931_9.40941695949313_1.59337575110982 chr15 66804361 66808069 + 1.59337575110982 NA intron (NM_001029841, intron 1 of 7) intron (NM_001029841, intron 1 of 7) 25614 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_87_726_-0.192789188852931_9.40941695949313_1.59337575110982 chr4 3834780 3835755 + 1.59337575110982 NA exon (NM_026147, exon 2 of 4) exon (NM_026147, exon 2 of 4) 333 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding common_peak1_97_636_0.18833898584074_9.40931905517667_1.59337575110982 chr13 49420605 49421851 + 1.59337575110982 NA promoter-TSS (NM_199056) promoter-TSS (NM_199056) 5 NM_199056 75678 Mm.390586 NM_199056 ENSMUSG00000021385 Ippk 1810043M15Rik|InsP6 inositol 1,3,4,5,6-pentakisphosphate 2-kinase protein-coding common_peak2_47_245_0.297873273939212_8.09145114230884_1.59315756184514 chr11 72549758 72551074 + 1.59315756184514 NA promoter-TSS (NM_029932) promoter-TSS (NM_029932) -170 NM_029932 77577 Mm.46185 NM_029932 ENSMUSG00000020798 Spns3 9830002I17Rik spinster homolog 3 protein-coding common_peak1_47_245_0.297873273939212_8.09145114230884_1.59315756184514-2 chr8 122472408 122473206 + 1.59315756184514 NA intron (NM_001033142, intron 1 of 5) intron (NM_001033142, intron 1 of 5) 3257 NM_001033142 68718 Mm.34356 NM_001033142 ENSMUSG00000014470 Rnf166 1110031E24Rik|AW555115|Zfp313l ring finger protein 166 protein-coding common_peak1_47_245_0.297873273939212_8.09145114230884_1.59315756184514 chr13 67683071 67683790 + 1.59315756184514 NA promoter-TSS (NM_001001187) promoter-TSS (NM_001001187) 82 NM_001001187 408068 Mm.435551 NM_175676 ENSMUSG00000048280 Zfp738 3830402I07Rik|6720487G11Rik zinc finger protein 738 protein-coding common_peak2_113_775_0.171198188549404_9.68551193646183_1.59244325261637 chr1 59684326 59686023 + 1.59244325261637 NA 5' UTR (NM_018868, exon 1 of 15) 5' UTR (NM_018868, exon 1 of 15) 168 NM_018868 55989 Mm.220367 NM_018868 ENSMUSG00000026020 Nop58 MSSP|Nol5|SIK|nop5 NOP58 ribonucleoprotein protein-coding common_peak2_128_910_0.158554442605181_9.91058446510464_1.59184363372361 chr3 9825687 9829738 + 1.59184363372361 NA intron (NM_001195031, intron 1 of 8) intron (NM_001195031, intron 1 of 8) 5967 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding common_peak1_19_141_-0.458612891873906_6.92044067356773_1.59136034006666-2 chr5 74039477 74040061 + 1.59136034006666 NA intron (NM_177561, intron 1 of 8) intron (NM_177561, intron 1 of 8) 28642 NM_177561 69727 Mm.48795 NM_177561 ENSMUSG00000054814 Usp46 1190009E20Rik|2410018I08Rik|AI451644 ubiquitin specific peptidase 46 protein-coding common_peak1_19_141_-0.458612891873906_6.92044067356773_1.59136034006666 chr3 121329833 121330312 + 1.59136034006666 NA intron (NM_024178, intron 3 of 3) intron (NM_024178, intron 3 of 3) 38255 NM_024178 66789 Mm.269881 NM_024178 ENSMUSG00000039887 Alg14 5430428G01Rik|AI854024 asparagine-linked glycosylation 14 protein-coding common_peak1_29_128_0.397429177174449_7.20994184401048_1.59071475804 chr18 67299860 67300440 + 1.59071475804 NA intron (NM_053261, intron 1 of 7) (TTTG)n|Simple_repeat|Simple_repeat 10927 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak2_29_128_0.397429177174449_7.20994184401048_1.59071475804 chr10 6986861 6987866 + 1.59071475804 NA intron (NM_001304955, intron 5 of 6) intron (NM_001304955, intron 5 of 6) -6898 NM_001170801 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding unique_peak2_29_128_0.397429177174449_7.20994184401048_1.59071475804 chr17 72960644 72961741 + 1.59071475804 NA Intergenic Intergenic 42887 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_28_210_-0.372435874194617_7.53488125160988_1.59045552565664 chr1 53781950 53782515 + 1.59045552565664 NA intron (NM_133810, intron 1 of 7) intron (NM_133810, intron 1 of 7) 2983 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak1_12_37_0.680881420010992_5.58836822344908_1.59039787900524 chr10 96275283 96275633 + 1.59039787900524 NA Intergenic Intergenic 49251 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA unique_peak1_12_37_0.680881420010992_5.58836822344908_1.59039787900524 chr16 38092732 38093143 + 1.59039787900524 NA intron (NM_019827, intron 1 of 10) intron (NM_019827, intron 1 of 10) -3677 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA common_peak1_12_37_0.680881420010992_5.58836822344908_1.59039787900524-2 chr15 101975534 101975908 + 1.59039787900524 NA Intergenic Intergenic -21434 NM_212487 332131 Mm.325105 NM_212487 ENSMUSG00000050463 Krt78 2310030B04Rik|Kb40 keratin 78 protein-coding common_peak1_148_1336_-0.139858747985732_10.3148543761005_1.59035785755072 chr8 72321934 72324796 + 1.59035785755072 NA Intergenic Intergenic 4303 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak2_115_793_0.168892739742324_9.71744156701412_1.58972950867998 chr4 129188748 129190751 + 1.58972950867998 NA promoter-TSS (NM_029036) promoter-TSS (NM_029036) -46 NM_134151 107271 Mm.145488 NM_134151 ENSMUSG00000028811 Yars AL024047|AU018965 tyrosyl-tRNA synthetase protein-coding common_peak1_18_66_0.534275012939118_6.33322669692733_1.58909774063684 chr12 4768828 4769274 + 1.58909774063684 NA promoter-TSS (NM_028376) promoter-TSS (NM_028376) 216 NM_175431 207921 Mm.184898 NM_175431 ENSMUSG00000050545 Fam228b A830093I24Rik family with sequence similarity 228, member B protein-coding common_peak1_18_66_0.534275012939118_6.33322669692733_1.58909774063684-2 chr9 21241587 21242044 + 1.58909774063684 NA Intergenic ID_B1|SINE|B4 -2483 NM_001110307 50868 Mm.248266 NM_016679 ENSMUSG00000003308 Keap1 INRF2|mKIAA0132 kelch-like ECH-associated protein 1 protein-coding common_peak1_51_274_0.278745747415266_8.24266068211966_1.58886528939059 chr17 85089778 85090573 + 1.58886528939059 NA promoter-TSS (NM_001163622) promoter-TSS (NM_001163622) 92 NM_145984 213760 Mm.259035 NM_145984 ENSMUSG00000024127 Prepl 2810457N15Rik|9530014L06Rik|D030028O16Rik|mKIAA0436 prolyl endopeptidase-like protein-coding common_peak1_339_3142_0.0869399134264537_11.661396513512_1.58856099033318 chr4 59547903 59550265 + 1.58856099033318 NA intron (NM_144904, intron 1 of 14) CpG 280 NM_178164 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding common_peak2_76_623_-0.208680678089182_9.18106187981766_1.58839009675402 chr5 134687884 134689853 + 1.58839009675402 NA promoter-TSS (NM_010717) promoter-TSS (NM_010717) -278 NM_010717 16885 Mm.15409 NM_010717 ENSMUSG00000029674 Limk1 KIZ-1|LIMK-1|Limk LIM-domain containing, protein kinase protein-coding common_peak1_76_623_-0.208680678089182_9.18106187981766_1.58839009675402 chr19 4217529 4218949 + 1.58839009675402 NA intron (NM_001310038, intron 2 of 3) intron (NM_001310038, intron 2 of 3) 3850 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding unique_peak2_27_202_-0.378771167167251_7.47595033360155_1.5880588763763 chr13 48549299 48550455 + 1.5880588763763 NA Intergenic Intergenic -11605 NR_029725 387244 NR_029725 ENSMUSG00000065421 Mirlet7a-1 Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1 microRNA let7a-1 ncRNA common_peak1_94_793_-0.184525406867746_9.54073249370908_1.58788279553303 chr12 54729001 54729837 + 1.58788279553303 NA Intergenic CpG -33554 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak1_42_211_0.317806715690752_7.88682381240857_1.58784812569186 chr2 30463307 30464229 + 1.58784812569186 NA Intergenic Intergenic 10431 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding unique_peak2_42_211_0.317806715690752_7.88682381240857_1.58784812569186 chr1 54859095 54860887 + 1.58784812569186 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 66396 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_101_860_-0.175586339083031_9.66207625785533_1.58756069541299 chr7 66127814 66129816 + 1.58756069541299 NA intron (NM_001081163, intron 2 of 2) intron (NM_001081163, intron 2 of 2) 19300 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_235_1977_0.108924316655429_11.0042888690868_1.58710417074436 chr11 34774154 34777202 + 1.58710417074436 NA intron (NM_033374, intron 1 of 51) intron (NM_033374, intron 1 of 51) 8227 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding common_peak1_26_194_-0.385122746910016_7.4147689402946_1.58672493363196 chr4 140869295 140869812 + 1.58672493363196 NA Intergenic Intergenic -3140 NR_040654 75128 Mm.67085 NR_040654 ENSMUSG00000087045 4930515B02Rik - RIKEN cDNA 4930515B02 gene ncRNA unique_peak2_26_194_-0.385122746910016_7.4147689402946_1.58672493363196 chrX 48623322 48624364 + 1.58672493363196 NA intron (NM_001290705, intron 1 of 9) intron (NM_001290705, intron 1 of 9) 169 NM_001166450 20523 Mm.34953 NM_011398 ENSMUSG00000031105 Slc25a14 BMCP1|UCP5|UCP5L|UCP5S solute carrier family 25 (mitochondrial carrier, brain), member 14 protein-coding common_peak2_182_1428_0.12786376610444_10.544722084148_1.58653888787048 chr5 67259740 67261652 + 1.58653888787048 NA 5' UTR (NM_030108, exon 1 of 9) 5' UTR (NM_030108, exon 1 of 9) 131 NM_030108 67878 Mm.23217 NM_028975 ENSMUSG00000037720 Tmem33 1110006G02Rik|1600019D15Rik|2410089A21Rik|2700052H22Rik|5430406L04Rik|AA388285|AI314185|AI426615|db83 transmembrane protein 33 protein-coding common_peak2_28_122_0.406148809173328_7.1455889099259_1.58627251763757-2 chr3 107759747 107760681 + 1.58627251763757 NA 5' UTR (NM_001113530, exon 1 of 9) 5' UTR (NM_001113530, exon 1 of 9) 255 NM_001113530 12977 Mm.795 NM_007778 ENSMUSG00000014599 Csf1 C87615|Csfm|MCSF|op colony stimulating factor 1 (macrophage) protein-coding common_peak2_28_122_0.406148809173328_7.1455889099259_1.58627251763757 chr11 50058992 50059786 + 1.58627251763757 NA intron (NM_001290749, intron 2 of 7) intron (NM_001290749, intron 2 of 7) -10313 NR_029769 723845 NR_029769 ENSMUSG00000065417 Mir340 Mirn340|mir-340|mmu-mir-340 microRNA 340 ncRNA common_peak1_28_122_0.406148809173328_7.1455889099259_1.58627251763757 chr1 80749348 80750033 + 1.58627251763757 NA intron (NM_175291, intron 1 of 55) MIR|SINE|MIR 8863 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak2_28_122_0.406148809173328_7.1455889099259_1.58627251763757-3 chr5 109844482 109845260 + 1.58627251763757 NA Intergenic Intergenic -10729 NR_027964 667213 Mm.454429 NR_027964 ENSMUSG00000105044 Gm10416 EG667213|ENSMUSG00000072761 zinc finger protein pseudogene pseudo common_peak1_19_71_0.521209226188464_6.43052961453654_1.58625694371143 chr15 5515978 5516421 + 1.58625694371143 NA intron (NR_045274, intron 1 of 4) Lx8|LINE|L1 19881 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_19_71_0.521209226188464_6.43052961453654_1.58625694371143-2 chr19 18600156 18600647 + 1.58625694371143 NA intron (NM_017375, intron 2 of 9) intron (NM_017375, intron 2 of 9) 31412 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_58_325_0.256798250810748_8.47712727963645_1.58594606610663 chr14 59259677 59260750 + 1.58594606610663 NA promoter-TSS (NM_001164329) promoter-TSS (NM_001164329) 3 NM_001164329 628693 Mm.479519 NM_001164329 ENSMUSG00000090881 Gm6904 EG628693 predicted gene 6904 protein-coding unique_peak2_58_325_0.256798250810748_8.47712727963645_1.58594606610663 chr2 31086983 31089092 + 1.58594606610663 NA intron (NM_001177648, intron 4 of 16) PB1D9|SINE|Alu 8463 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_36_274_-0.323504157200611_7.94153572981172_1.58537907906073 chr9 41078670 41079308 + 1.58537907906073 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) -74361 NM_019465 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak1_81_669_-0.199961709093353_9.28803643079846_1.58480502738501 chr4 123576545 123577763 + 1.58480502738501 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -39266 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak1_471_4752_0.0707406522985554_12.2499930124516_1.58478882621453 chr12 25097654 25101340 + 1.58478882621453 NA Intergenic Intergenic -3405 NM_010496 15902 Mm.34871 NM_010496 ENSMUSG00000020644 Id2 AI255428|C78922|Idb2|bHLHb26 inhibitor of DNA binding 2 protein-coding common_peak1_205_1954_-0.114792697231618_10.8755565435789_1.58385763847605 chr5 24423725 24425785 + 1.58385763847605 NA promoter-TSS (NM_009207) promoter-TSS (NM_009207) -477 NM_009207 20535 Mm.4580 NM_009207 ENSMUSG00000028962 Slc4a2 Ae2|B3RP solute carrier family 4 (anion exchanger), member 2 protein-coding common_peak2_121_847_0.16321130767013_9.80952610839826_1.58371121352664 chr13 67172639 67174051 + 1.58371121352664 NA intron (NM_001013769, intron 1 of 3) intron (NM_001013769, intron 1 of 3) 163 NM_001013769 380855 Mm.284988 NM_001013769 ENSMUSG00000058900 Rsl1 rslcan-9 regulator of sex limited protein 1 protein-coding common_peak2_54_295_0.271837652756966_8.34537219200743_1.5832026169788 chr13 67682862 67684130 + 1.5832026169788 NA promoter-TSS (NM_001001187) promoter-TSS (NM_001001187) 16 NM_001001187 408068 Mm.435551 NM_175676 ENSMUSG00000048280 Zfp738 3830402I07Rik|6720487G11Rik zinc finger protein 738 protein-coding common_peak1_46_357_-0.280684689838239_8.34347343234514_1.5832026169788 chr11 118290459 118290983 + 1.5832026169788 NA promoter-TSS (NM_001033528) promoter-TSS (NM_001033528) -477 NM_001033528 72344 Mm.232293 NM_001033528 ENSMUSG00000033909 Usp36 2700002L06Rik|mKIAA1453 ubiquitin specific peptidase 36 protein-coding common_peak2_212_2033_-0.112809901857199_10.9336990129289_1.58315357164238 chr1 92178808 92181766 + 1.58315357164238 NA promoter-TSS (NM_207225) promoter-TSS (NM_207225) 54 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_27_116_0.416200030434521_7.07846473480067_1.58301101258337-2 chr12 86795483 86796064 + 1.58301101258337 NA Intergenic Intergenic 61404 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak1_21_156_-0.434823006197676_7.07720924579279_1.58301101258337 chr11 115640775 115641199 + 1.58301101258337 NA Intergenic Intergenic -12692 NM_001252395 67283 Mm.383426 NM_026071 ENSMUSG00000020744 Slc25a19 2900089E13Rik|DNC|MUP1|TPC solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein-coding unique_peak2_21_156_-0.434823006197676_7.07720924579279_1.58301101258337-2 chr15 75137226 75138466 + 1.58301101258337 NA Intergenic Intergenic -17415 NM_001310438 546644 NM_008531 ENSMUSG00000022582 Ly6g Gr-1|Gr1|Ly-6G lymphocyte antigen 6 complex, locus G protein-coding common_peak1_21_156_-0.434823006197676_7.07720924579279_1.58301101258337-2 chr12 73634006 73634546 + 1.58301101258337 NA intron (NM_001313977, intron 2 of 14) B4A|SINE|B4 49480 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_27_116_0.416200030434521_7.07846473480067_1.58301101258337 chr12 38779459 38780121 + 1.58301101258337 NA promoter-TSS (NM_007960) promoter-TSS (NM_007960) -468 NM_007960 14009 Mm.4866 NM_007960 ENSMUSG00000004151 Etv1 ER81|Etsrp81 ets variant 1 protein-coding unique_peak2_21_156_-0.434823006197676_7.07720924579279_1.58301101258337 chr14 66260643 66261489 + 1.58301101258337 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) 19986 NM_172498 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_35_265_-0.323984762442166_7.89329005428011_1.58243023539788 chr15 81820028 81820708 + 1.58243023539788 NA intron (NM_153484, intron 2 of 3) intron (NM_153484, intron 2 of 3) 8954 NM_017376 21685 Mm.270278 NM_017376 ENSMUSG00000022389 Tef 2310028D20Rik thyrotroph embryonic factor protein-coding common_peak1_35_265_-0.323984762442166_7.89329005428011_1.58243023539788-2 chr5 115652488 115653100 + 1.58243023539788 NA intron (NM_001080808, intron 7 of 8) intron (NM_001080808, intron 7 of 8) 7221 NR_105997 102465623 NR_105997 ENSMUSG00000099254 Mir7030 Gm27267|mmu-mir-7030 microRNA 7030 ncRNA unique_peak2_35_265_-0.323984762442166_7.89329005428011_1.58243023539788 chr2 50813266 50814666 + 1.58243023539788 NA Intergenic Intergenic -95718 NR_033595 227885 Mm.301654 NR_033595 ENSMUSG00000083270 Gm13498 OTTMUSG00000012426 heat shock protein 90 alpha (cytosolic), class B member 1 pseudogene pseudo common_peak2_50_391_-0.267039066987751_8.48119031062133_1.58235203685789 chr15 102721239 102722389 + 1.58235203685789 NA intron (NM_026192, intron 1 of 14) intron (NM_026192, intron 1 of 14) 364 NM_026192 67488 Mm.71682 NM_026192 ENSMUSG00000023055 Calcoco1 1810009B06Rik|Cocoa|Gcap11|mKIAA1536 calcium binding and coiled coil domain 1 protein-coding common_peak2_398_3846_0.0785167145190275_11.9487764715561_1.58232511466763 chr4 139190907 139195545 + 1.58232511466763 NA promoter-TSS (NM_001271405) promoter-TSS (NM_001271405) 327 NM_001037761 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak2_23_171_-0.412489286610003_7.2200201113971_1.58205978462113-2 chr15 79141129 79142032 + 1.58205978462113 NA promoter-TSS (NM_138581) promoter-TSS (NM_138581) 213 NM_027231 69833 Mm.279861 NM_027231 ENSMUSG00000033020 Polr2f 1810060D16Rik|RPB6 polymerase (RNA) II (DNA directed) polypeptide F protein-coding unique_peak2_23_171_-0.412489286610003_7.2200201113971_1.58205978462113 chr1 171079741 171081067 + 1.58205978462113 NA Intergenic CpG -15752 NR_106103 102466998 NR_106103 ENSMUSG00000099119 Mir6546 Gm27408|mmu-mir-6546 microRNA 6546 ncRNA common_peak2_23_171_-0.412489286610003_7.2200201113971_1.58205978462113 chr10 67643408 67644143 + 1.58205978462113 NA Intergenic Intergenic -94820 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak2_129_1140_-0.152556244769428_10.079804953904_1.58114586744891 chr13 95695821 95698748 + 1.58114586744891 NA intron (NM_010170, intron 1 of 1) intron (NM_010170, intron 1 of 1) 364 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak1_26_110_0.427791700489489_7.00831171659485_1.58110933642455-2 chr11 53772338 53772846 + 1.58110933642455 NA intron (NM_001159396, intron 2 of 9) intron (NM_001159396, intron 2 of 9) 2119 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding unique_peak2_20_149_-0.451344046697383_7.00314666714719_1.58110933642455 chr8 88618773 88619635 + 1.58110933642455 NA Intergenic ORR1D2|LTR|ERVL-MaLR 16924 NM_027840 71607 Mm.270607 NM_027840 ENSMUSG00000031662 Snx20 9130017C17Rik sorting nexin 20 protein-coding common_peak1_26_110_0.427791700489489_7.00831171659485_1.58110933642455-5 chr14 75444717 75445237 + 1.58110933642455 NA Intergenic Intergenic -11005 NM_001128093 380918 Mm.484360 NM_001128093 ENSMUSG00000091722 Siah3 Gm912 seven in absentia homolog 3 (Drosophila) protein-coding common_peak1_26_110_0.427791700489489_7.00831171659485_1.58110933642455-3 chr11 70897344 70898042 + 1.58110933642455 NA intron (NM_001291141, intron 4 of 16) PB1D9|SINE|Alu 52932 NM_001291142 54189 Mm.7087 NM_019400 ENSMUSG00000020817 Rabep1 Rab5ep|rabaptin-5|rabaptin-5alpha rabaptin, RAB GTPase binding effector protein 1 protein-coding common_peak1_20_149_-0.451344046697383_7.00314666714719_1.58110933642455 chr2 3725395 3725911 + 1.58110933642455 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 12195 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_26_110_0.427791700489489_7.00831171659485_1.58110933642455-4 chr13 95616863 95617351 + 1.58110933642455 NA intron (NM_010169, intron 1 of 1) intron (NM_010169, intron 1 of 1) 1326 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding common_peak1_26_110_0.427791700489489_7.00831171659485_1.58110933642455 chr1 34464371 34464887 + 1.58110933642455 NA intron (NM_011206, intron 5 of 14) L1MB8|LINE|L1 4883 NM_011206 19253 Mm.361 NM_011206 ENSMUSG00000026126 Ptpn18 FLP1|HSCF|PTP-HSCF|PTP-K1|Ptpk1 protein tyrosine phosphatase, non-receptor type 18 protein-coding common_peak2_78_641_-0.204330396008986_9.22426428911781_1.58103740659754 chr10 117851590 117854298 + 1.58103740659754 NA Intergenic Intergenic -6970 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak1_36_172_0.345155423574686_7.60720593942407_1.58053267290923 chr11 49971958 49972646 + 1.58053267290923 NA intron (NM_029004, intron 11 of 13) intron (NM_029004, intron 11 of 13) -53029 NM_021540 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak1_64_370_0.241639143712094_8.65609494847685_1.58050479457596 chr10 8214251 8215202 + 1.58050479457596 NA intron (NM_177387, intron 7 of 7) intron (NM_177387, intron 7 of 7) -258603 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak2_246_2422_-0.103209570979622_11.1909739039615_1.58041558538409 chr15 99028922 99031639 + 1.58041558538409 NA 5' UTR (NM_009448, exon 1 of 4) 5' UTR (NM_009448, exon 1 of 4) 389 NM_009448 22146 Mm.88212 NM_009448 ENSMUSG00000043091 Tuba1c M[a]6|Tuba6 tubulin, alpha 1C protein-coding common_peak1_149_1346_-0.138772115986278_10.3261480774692_1.58031256075788 chr8 70338651 70340670 + 1.58031256075788 NA intron (NM_001122829, intron 8 of 23) intron (NM_001122829, intron 8 of 23) 9895 NM_008107 14559 Mm.258280 NM_008107 ENSMUSG00000087408 Gdf1 AI385651|Gdf-1 growth differentiation factor 1 protein-coding common_peak1_41_315_-0.299693793192247_8.15393385158098_1.58029618571833 chr10 127655530 127656240 + 1.58029618571833 NA intron (NM_009284, intron 13 of 21) B1_Mus1|SINE|Alu 10818 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding common_peak2_67_393_0.234709063890508_8.73940635140163_1.57978716652223 chr3 89269657 89271043 + 1.57978716652223 NA intron (NM_009057, intron 1 of 5) intron (NM_009057, intron 1 of 5) 220 NM_009057 19729 Mm.17958 NM_009057 ENSMUSG00000027953 Slc50a1 MmSWEET1|Rag1ap1|Rga solute carrier family 50 (sugar transporter), member 1 protein-coding common_peak1_24_179_-0.405837904193291_7.28893414423303_1.57963826984434 chr7 140116584 140117003 + 1.57963826984434 NA promoter-TSS (NM_053119) promoter-TSS (NM_053119) -370 NM_053119 93747 Mm.24452 NM_053119 ENSMUSG00000025465 Echs1 C80529 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial protein-coding common_peak1_139_1242_-0.144940244156238_10.2071404589744_1.57948006589734 chr10 81558930 81561286 + 1.57948006589734 NA intron (NR_074087, intron 1 of 6) intron (NR_074087, intron 1 of 6) 664 NM_001276288 14797 Mm.180013 NM_010347 ENSMUSG00000054452 Aes AL024115|Esp1|Grg|Grg-5|Grg5|Tle5 amino-terminal enhancer of split protein-coding common_peak2_292_2603_0.0950799300272145_11.3940536981792_1.57914052359275 chr10 81495620 81500603 + 1.57914052359275 NA 3' UTR (NM_010102, exon 1 of 1) 3' UTR (NM_010102, exon 1 of 1) -1748 NM_134009 103425 Mm.302791 NM_134009 ENSMUSG00000020238 Ncln 3100002P13Rik|AW120537 nicalin protein-coding common_peak1_91_586_0.194468733356171_9.29445105978814_1.57867250428731 chr13 63562861 63564281 + 1.57867250428731 NA intron (NM_008957, intron 2 of 22) CpG 1949 NM_008957 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes patched 1 protein-coding common_peak2_50_267_0.281581586669684_8.20687998379261_1.57782866588685 chr7 19024224 19025086 + 1.57782866588685 NA intron (NM_026605, intron 1 of 26) intron (NM_026605, intron 1 of 26) 278 NM_026605 68188 Mm.130902 NM_026605 ENSMUSG00000023118 Sympk 1500016F02Rik|4632415H16Rik|AA125406|AI449890|SPK|SYM symplekin protein-coding common_peak2_50_267_0.281581586669684_8.20687998379261_1.57782866588685-2 chr8 60890208 60891231 + 1.57782866588685 NA intron (NM_028299, intron 1 of 7) (CTCA)n|Simple_repeat|Simple_repeat 268 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding common_peak2_311_2819_0.0913009358807741_11.5071299152265_1.57753953976516 chr10 67644270 67649268 + 1.57753953976516 NA Intergenic Intergenic -97814 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_78_479_0.215208495504799_9.01449484336092_1.57745353694517 chr10 39490141 39491514 + 1.57745353694517 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 121028 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_22_164_-0.427861410152306_7.15239150916966_1.57725417543915-3 chr16 30063768 30064305 + 1.57725417543915 NA Intergenic CpG -1321 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hairy and enhancer of split 1 (Drosophila) protein-coding unique_peak2_22_164_-0.427861410152306_7.15239150916966_1.57725417543915 chr15 100761067 100762160 + 1.57725417543915 NA promoter-TSS (NM_021530) promoter-TSS (NM_021530) -134 NM_021530 59033 Mm.209856 NM_021530 ENSMUSG00000023032 Slc4a8 AW493845|C230026C11|NDCBE|kNBC-3 solute carrier family 4 (anion exchanger), member 8 protein-coding common_peak1_22_164_-0.427861410152306_7.15239150916966_1.57725417543915 chr10 59382041 59382489 + 1.57725417543915 NA Intergenic IAPEz-int|LTR|ERVK -21420 NM_023530 69836 Mm.30268 NM_023530 ENSMUSG00000009646 Pla2g12b 2010002E04Rik|Fksg71|Pla2g13|hlb218 phospholipase A2, group XIIB protein-coding common_peak1_22_164_-0.427861410152306_7.15239150916966_1.57725417543915-2 chr12 118376187 118376668 + 1.57725417543915 NA Intergenic Intergenic -74987 NM_001166385 20688 Mm.34699 NM_009239 ENSMUSG00000025323 Sp4 5730497N03Rik|HF-1b|HF1-b trans-acting transcription factor 4 protein-coding common_peak1_35_165_0.356258241712099_7.55316855220297_1.57670264559068 chr14 66224585 66225275 + 1.57670264559068 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -11378 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_35_165_0.356258241712099_7.55316855220297_1.57670264559068 chr10 81401446 81402638 + 1.57670264559068 NA intron (NM_026756, intron 8 of 8) intron (NM_026756, intron 8 of 8) 8978 NM_001099917 72273 Mm.253147 NM_001099917 ENSMUSG00000078439 Smim24 2210404O07Rik small integral membrane protein 24 protein-coding common_peak2_100_850_-0.176167128080506_9.64493175764571_1.57638064760809 chr11 117114196 117115972 + 1.57638064760809 NA promoter-TSS (NM_001166506) promoter-TSS (NM_001166506) -88 NR_029459 74136 Mm.272312 NM_028777 ENSMUSG00000020823 Sec14l1 1200017E04Rik|2810012L19Rik|Naa-35 SEC14-like lipid binding 1 protein-coding common_peak2_116_802_0.167821788243831_9.73316707163923_1.57610073993831 chr13 100593156 100595080 + 1.57610073993831 NA Intergenic IAPLTR1_Mm|LTR|ERVK 22826 NM_178410 218518 Mm.25300 NM_178410 ENSMUSG00000021636 Marveld2 BC003296|MARVD2|Mrvldc2|Tric|Trica|Tricb|Tricc MARVEL (membrane-associating) domain containing 2 protein-coding common_peak2_60_478_-0.239362394689207_8.78420064839158_1.57584810400049 chr6 121271869 121273076 + 1.57584810400049 NA Intergenic ORR1D1|LTR|ERVL-MaLR 26566 NM_011909 24110 Mm.326911 NM_011909 ENSMUSG00000030107 Usp18 1110058H21Rik|AW047653|UBP43|Ubp15 ubiquitin specific peptidase 18 protein-coding common_peak2_45_348_-0.282010110929788_8.30607817074476_1.57544293795367-2 chr16 5202783 5204558 + 1.57544293795367 NA non-coding (NR_027804, exon 1 of 9) non-coding (NR_027804, exon 1 of 9) 342 NM_013796 27426 Mm.215641 NM_013796 ENSMUSG00000023143 Nagpa AI596180|UCE N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase protein-coding unique_peak2_45_348_-0.282010110929788_8.30607817074476_1.57544293795367 chr12 77949210 77951210 + 1.57544293795367 NA Intergenic Intergenic -276445 NM_172952 268566 Mm.341742 NM_145965 ENSMUSG00000047454 Gphn 5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph gephyrin protein-coding common_peak2_45_348_-0.282010110929788_8.30607817074476_1.57544293795367 chr15 37790589 37792317 + 1.57544293795367 NA intron (NM_134094, intron 1 of 6) CpG 547 NM_001170866 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak2_45_348_-0.282010110929788_8.30607817074476_1.57544293795367-3 chr16 18628872 18630413 + 1.57544293795367 NA intron (NM_213614, intron 2 of 11) CpG 296 NM_213614 18951 Mm.20365 NM_213614 ENSMUSG00000072214 Sept5 Cdcrel-1|Cdcrel1|Pnutl1 septin 5 protein-coding common_peak1_45_348_-0.282010110929788_8.30607817074476_1.57544293795367 chr2 3331947 3332721 + 1.57544293795367 NA intron (NM_001013376, intron 1 of 1) CpG 294 NM_001013376 227522 Mm.293948 NM_001013376 ENSMUSG00000049950 Rpp38 C330006A15Rik ribonuclease P/MRP 38 subunit protein-coding common_peak2_21_82_0.484758311347027_6.61741858702044_1.57512411113643 chr2 129065979 129066538 + 1.57512411113643 NA exon (NM_027192, exon 1 of 7) exon (NM_027192, exon 1 of 7) 311 NM_027192 69737 Mm.33909 NM_027192 ENSMUSG00000027394 Ttl 2410003M22Rik|2700049H19Rik|AI848570 tubulin tyrosine ligase protein-coding unique_peak2_21_82_0.484758311347027_6.61741858702044_1.57512411113643 chr10 118006809 118007382 + 1.57512411113643 NA Intergenic Intergenic 81636 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA unique_peak2_21_82_0.484758311347027_6.61741858702044_1.57512411113643-2 chr11 97804296 97805094 + 1.57512411113643 NA intron (NM_010688, intron 1 of 6) intron (NM_010688, intron 1 of 6) 5023 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak2_69_558_-0.218646447133301_9.01738124927654_1.57498949641533 chr19 56319568 56321315 + 1.57498949641533 NA TTS (NM_146101) TTS (NM_146101) 32503 NM_146101 226243 Mm.25791 NM_146101 ENSMUSG00000025075 Habp2 AI035669|FSAP|HABP|HGFAL|PHBP hyaluronic acid binding protein 2 protein-coding common_peak1_34_257_-0.32978154089972_7.84633648497339_1.57464949806577 chr17 21213577 21214271 + 1.57464949806577 NA Intergenic Intergenic -14902 NM_134198 171232 Mm.377189 NM_134198 ENSMUSG00000057203 Vmn1r234 V1rf1 vomeronasal 1 receptor 234 protein-coding common_peak2_41_205_0.317586427801636_7.84529374108404_1.57464949806577 chr10 75059511 75061206 + 1.57464949806577 NA promoter-TSS (NM_001081412) promoter-TSS (NM_001081412) -538 NM_001081412 110279 Mm.333722 NM_001081412 ENSMUSG00000009681 Bcr 5133400C09Rik|AI561783|AI853148|mKIAA3017 breakpoint cluster region protein-coding common_peak2_41_205_0.317586427801636_7.84529374108404_1.57464949806577-2 chr11 46461039 46462226 + 1.57464949806577 NA intron (NM_134250, intron 3 of 6) intron (NM_134250, intron 3 of 6) 6701 NM_134250 171285 Mm.72168 NM_134250 ENSMUSG00000020399 Havcr2 TIM-3|Tim3|Timd3 hepatitis A virus cellular receptor 2 protein-coding common_peak2_34_257_-0.32978154089972_7.84633648497339_1.57464949806577 chr11 11836542 11837767 + 1.57464949806577 NA intron (NM_016672, intron 8 of 14) intron (NM_016672, intron 8 of 14) -28192 NM_001163360 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding common_peak2_41_205_0.317586427801636_7.84529374108404_1.57464949806577-3 chr11 48991348 48992424 + 1.57464949806577 NA intron (NM_011579, intron 1 of 1) intron (NM_011579, intron 1 of 1) 360 NM_011579 21822 Mm.15793 NM_011579 ENSMUSG00000078922 Tgtp1 Gtp2|Irgb6|Mg21|Tgtp T cell specific GTPase 1 protein-coding common_peak2_34_257_-0.32978154089972_7.84633648497339_1.57464949806577-2 chr16 92786950 92787936 + 1.57464949806577 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 38631 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_66_531_-0.224738735351465_8.94291306782546_1.57434376156123 chr5 105442912 105444066 + 1.57434376156123 NA intron (NM_001033550, intron 1 of 4) intron (NM_001033550, intron 1 of 4) 27714 NM_001033550 433926 Mm.439781 NM_001033550 ENSMUSG00000070639 Lrrc8b R75581|Ta-lrrp|mKIAA0231 leucine rich repeat containing 8 family, member B protein-coding common_peak1_23_93_0.459186616414457_6.78418215988487_1.57431554914519-2 chr15 81097546 81097989 + 1.57431554914519 NA intron (NM_001082536, intron 2 of 13) intron (NM_001082536, intron 2 of 13) 7280 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak1_23_93_0.459186616414457_6.78418215988487_1.57431554914519 chr12 54710935 54711416 + 1.57431554914519 NA Intergenic Intergenic -15310 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak1_500_5123_0.0678263614995949_12.3569679410914_1.57382086160349 chr3 106786474 106790710 + 1.57382086160349 NA intron (NM_007651, intron 1 of 7) intron (NM_007651, intron 1 of 7) 1557 NM_007651 12508 Mm.316861 NM_007651 ENSMUSG00000040747 Cd53 AI323659|Ox-44|Tspan25 CD53 antigen protein-coding common_peak1_204_1943_-0.115263651662033_10.8671806777748_1.5738059882065 chr15 100706515 100709166 + 1.5738059882065 NA intron (NM_172451, intron 4 of 11) B1_Mus1|SINE|Alu 12637 NM_001161768 207839 Mm.22969 NM_172451 ENSMUSG00000037280 Galnt6 4632410F13|AW047994|GalNAc-T6 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 protein-coding common_peak1_296_3013_-0.0918747216303757_11.5115263407826_1.57360444785876 chr7 4148684 4150548 + 1.57360444785876 NA exon (NM_175529, exon 1 of 1) exon (NM_175529, exon 1 of 1) 256 NM_175529 243813 Mm.347643 NM_175529 ENSMUSG00000043432 Leng9 9530024C23Rik|F630035L11Rik leukocyte receptor cluster (LRC) member 9 protein-coding common_peak1_107_723_0.175586302129101_9.58763903814776_1.57357839586304 chr2 120969884 120971301 + 1.57357839586304 NA exon (NM_009461, exon 1 of 47) exon (NM_009461, exon 1 of 47) 123 NM_009461 22222 Mm.389330 NM_009461 ENSMUSG00000027272 Ubr1 AI504731 ubiquitin protein ligase E3 component n-recognin 1 protein-coding common_peak1_237_1999_0.107900396763911_11.019734483044_1.57347537147343 chr15 60101859 60104492 + 1.57347537147343 NA Intergenic Intergenic -86557 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_49_382_-0.268573078602216_8.44691404262385_1.57342773779355 chr10 39517725 39518691 + 1.57342773779355 NA intron (NM_008054, intron 5 of 13) intron (NM_008054, intron 5 of 13) -94726 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding unique_peak2_13_98_-0.569404181248039_6.34465452945559_1.57329568374622 chr4 63543977 63544640 + 1.57329568374622 NA promoter-TSS (NM_024173) promoter-TSS (NM_024173) -457 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding unique_peak2_13_98_-0.569404181248039_6.34465452945559_1.57329568374622-2 chr4 137607333 137608223 + 1.57329568374622 NA intron (NM_130879, intron 4 of 27) B1_Mus1|SINE|Alu 13589 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak2_320_2923_0.08937733955662_11.5584162657307_1.57317024874498 chr4 45010693 45014046 + 1.57317024874498 NA promoter-TSS (NM_001163284) promoter-TSS (NM_001163284) 43 NM_001163284 230119 Mm.44222 NM_173399 ENSMUSG00000049657 Zbtb5 5930421I10|9430083K24Rik|AI646847|mKIAA0354 zinc finger and BTB domain containing 5 protein-coding common_peak1_93_603_0.191338659287297_9.33407406896873_1.57313354805972 chr7 44928945 44929663 + 1.57313354805972 NA exon (NM_007458, exon 1 of 24) exon (NM_007458, exon 1 of 24) 186 NM_007458 11771 Mm.6877 NM_007458 ENSMUSG00000060279 Ap2a1 Adtaa adaptor-related protein complex 2, alpha 1 subunit protein-coding common_peak2_100_662_0.18398313349287_9.46485662685902_1.5727175460688 chr13 49420425 49421955 + 1.5727175460688 NA promoter-TSS (NM_199056) promoter-TSS (NM_199056) -33 NR_075085 75678 Mm.390586 NM_199056 ENSMUSG00000021385 Ippk 1810043M15Rik|InsP6 inositol 1,3,4,5,6-pentakisphosphate 2-kinase protein-coding common_peak2_95_802_-0.182256087052506_9.55812813399106_1.57252284384565 chr6 113325828 113327805 + 1.57252284384565 NA promoter-TSS (NM_010957) promoter-TSS (NM_010957) -160 NM_010957 18294 Mm.43612 NM_010957 ENSMUSG00000030271 Ogg1 Mmh 8-oxoguanine DNA-glycosylase 1 protein-coding common_peak1_80_660_-0.202164378514814_9.26742427225028_1.57239016418145 chr14 31128080 31129087 + 1.57239016418145 NA intron (NM_001308091, intron 1 of 1) intron (NM_001308091, intron 1 of 1) 347 NM_001308466 66487 Mm.379116 NM_001308091 ENSMUSG00000058351 Smim4 2010107H07Rik|Gm41122 small integral membrane protein 4 protein-coding common_peak1_111_958_-0.165597632627493_9.82258818870438_1.57237909913801 chr4 141722510 141724083 + 1.57237909913801 NA 5' UTR (NM_001017966, exon 1 of 10) 5' UTR (NM_001017966, exon 1 of 10) 123 NM_001017966 68817 Mm.393721 NM_001017966 ENSMUSG00000078515 Ddi2 1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698 DNA-damage inducible protein 2 protein-coding common_peak2_111_958_-0.165597632627493_9.82258818870438_1.57237909913801 chr4 132273637 132275239 + 1.57237909913801 NA promoter-TSS (NM_025579) promoter-TSS (NM_025579) 63 NM_025579 66464 Mm.331926 NM_025579 ENSMUSG00000028899 Taf12 20kDa|2810422D08Rik|AW557038|Taf2J TATA-box binding protein associated factor 12 protein-coding common_peak1_20_77_0.492072424936249_6.53143843133037_1.572239968189-4 chr5 23849785 23850315 + 1.572239968189 NA promoter-TSS (NR_045042) promoter-TSS (NR_045042) -547 NR_045042 67194 Mm.423733 NR_045040 ENSMUSG00000097180 2700038G22Rik - RIKEN cDNA 2700038G22 gene ncRNA unique_peak2_20_77_0.492072424936249_6.53143843133037_1.572239968189 chr2 119741744 119742329 + 1.572239968189 NA promoter-TSS (NM_146125) promoter-TSS (NM_146125) -301 NM_146125 228550 Mm.65337 NM_146125 ENSMUSG00000027296 Itpka - inositol 1,4,5-trisphosphate 3-kinase A protein-coding common_peak1_20_77_0.492072424936249_6.53143843133037_1.572239968189-2 chr2 13406474 13407096 + 1.572239968189 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 85091 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak2_20_77_0.492072424936249_6.53143843133037_1.572239968189 chr10 63176423 63177003 + 1.572239968189 NA intron (NM_182992, intron 2 of 19) B1_Mm|SINE|Alu 27239 NM_182992 68802 Mm.259767 NM_182992 ENSMUSG00000020067 Mypn 1110056A04Rik|9830112J03|AI853556|mKIAA4170 myopalladin protein-coding common_peak1_20_77_0.492072424936249_6.53143843133037_1.572239968189-3 chr4 132007497 132008035 + 1.572239968189 NA intron (NM_183428, intron 1 of 20) B2_Mm2|SINE|B2 41312 NM_001128606 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding common_peak1_20_77_0.492072424936249_6.53143843133037_1.572239968189 chr1 54872723 54873293 + 1.572239968189 NA intron (NM_001081433, intron 1 of 27) MLT1A0|LTR|ERVL-MaLR 53379 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_156_1420_-0.135215204837131_10.4050832368242_1.57172604556766 chr11 119354242 119356010 + 1.57172604556766 NA promoter-TSS (NM_178743) promoter-TSS (NM_178743) 384 NM_018822 27029 Mm.103788 NM_018822 ENSMUSG00000005043 Sgsh 4632406A19Rik N-sulfoglucosamine sulfohydrolase (sulfamidase) protein-coding common_peak1_53_288_0.273894195525273_8.31187278026331_1.57142931941406-2 chr5 140575166 140575939 + 1.57142931941406 NA Intergenic Intergenic -10485 NM_030022 77998 Mm.160040 NM_030022 ENSMUSG00000036586 Grifin E130101O17Rik galectin-related inter-fiber protein protein-coding common_peak2_53_288_0.273894195525273_8.31187278026331_1.57142931941406 chr13 108315497 108316929 + 1.57142931941406 NA promoter-TSS (NM_178683) promoter-TSS (NM_178683) -124 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak1_53_288_0.273894195525273_8.31187278026331_1.57142931941406 chr19 46152492 46152973 + 1.57142931941406 NA 5' UTR (NM_178930, exon 1 of 40) 5' UTR (NM_178930, exon 1 of 40) 174 NM_178930 107338 Mm.271620 NM_178930 ENSMUSG00000025224 Gbf1 1700083E03Rik|AI035702|AW049900|mKIAA0248 golgi-specific brefeldin A-resistance factor 1 protein-coding common_peak1_24_99_0.44215900236166_6.86493569095555_1.57130714634859-3 chr5 21418053 21418555 + 1.57130714634859 NA intron (NM_029195, intron 1 of 18) L1MEf|LINE|L1 6373 NM_029195 75172 Mm.426695 NM_029195 ENSMUSG00000064280 Ccdc146 4930528G09Rik|mKIAA1505 coiled-coil domain containing 146 protein-coding common_peak1_24_99_0.44215900236166_6.86493569095555_1.57130714634859-4 chr5 72161487 72162066 + 1.57130714634859 NA intron (NM_178599, intron 3 of 4) intron (NM_178599, intron 3 of 4) 6407 NM_178599 27784 Mm.44223 NM_178599 ENSMUSG00000029213 Commd8 C77770|D5Buc26e COMM domain containing 8 protein-coding common_peak1_24_99_0.44215900236166_6.86493569095555_1.57130714634859 chr13 101539105 101539583 + 1.57130714634859 NA Intergenic Intergenic -141764 NR_046187 78136 Mm.399065 NR_046187 4922502H24Rik - RIKEN cDNA 4922502H24 gene ncRNA common_peak1_24_99_0.44215900236166_6.86493569095555_1.57130714634859-2 chr2 29698871 29699405 + 1.57130714634859 NA intron (NM_054050, intron 6 of 23) intron (NM_054050, intron 6 of 23) -62390 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak2_250_2468_-0.101913640328783_11.2187543009784_1.57116161807846 chr5 64504389 64507110 + 1.57116161807846 NA Intergenic Intergenic 28741 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA common_peak2_558_6414_-0.0625014646482622_12.6159828176529_1.5711381997443 chr4 129817484 129824057 + 1.5711381997443 NA promoter-TSS (NM_001164745) promoter-TSS (NM_001164745) 62 NM_001164745 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding common_peak1_56_442_-0.246664169004845_8.6678308040526_1.57106265566677 chr9 72465535 72466349 + 1.57106265566677 NA intron (NM_009359, intron 10 of 11) intron (NM_009359, intron 10 of 11) 26017 NM_009359 21778 Mm.14485 NM_009359 ENSMUSG00000090626 Tex9 Gm19407|tsec-1 testis expressed gene 9 protein-coding common_peak2_60_340_0.250891522022799_8.53907369003557_1.57064289309073 chr11 78595386 78597621 + 1.57064289309073 NA intron (NM_008702, intron 3 of 10) intron (NM_008702, intron 3 of 10) -45768 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e transmembrane protein 97 protein-coding common_peak2_25_105_0.427500790077733_6.94167084960207_1.57038183527693 chr10 121596433 121597256 + 1.57038183527693 NA intron (NM_001081056, intron 22 of 24) intron (NM_001081056, intron 22 of 24) -10050 NM_019786 56480 Mm.34580 NM_019786 ENSMUSG00000020115 Tbk1 1200008B05Rik|AI462036|AW048562 TANK-binding kinase 1 protein-coding common_peak2_25_105_0.427500790077733_6.94167084960207_1.57038183527693-2 chr14 47567710 47568554 + 1.57038183527693 NA intron (NM_172599, intron 1 of 9) intron (NM_172599, intron 1 of 9) 302 NM_172599 100504663 Mm.287279 NM_172599 ENSMUSG00000037526 Atg14 4832427M01|Atg14L|D14Ertd114e|D14Ertd436e autophagy related 14 protein-coding common_peak1_25_105_0.427500790077733_6.94167084960207_1.57038183527693 chr12 25232601 25233120 + 1.57038183527693 NA Intergenic Intergenic 103686 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_25_105_0.427500790077733_6.94167084960207_1.57038183527693-4 chr3 52458300 52458732 + 1.57038183527693 NA Intergenic RSINE1|SINE|B4 190179 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_25_105_0.427500790077733_6.94167084960207_1.57038183527693-2 chr13 41379971 41380610 + 1.57038183527693 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -21289 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_25_105_0.427500790077733_6.94167084960207_1.57038183527693-3 chr15 27666964 27667545 + 1.57038183527693 NA intron (NM_001242424, intron 1 of 8) intron (NM_001242424, intron 1 of 8) 14288 NM_001242424 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_69_408_0.232100992768141_8.79200752932582_1.57009301483435 chr10 60752245 60753059 + 1.57009301483435 NA intron (NM_023596, intron 1 of 5) CpG 130 NM_023596 71279 Mm.284462 NM_023596 ENSMUSG00000020100 Slc29a3 4933435C21Rik|AW987637|Ent3 solute carrier family 29 (nucleoside transporters), member 3 protein-coding common_peak1_158_1193_0.138289160331592_10.2907317014306_1.56967309475718 chr6 134566207 134567641 + 1.56967309475718 NA promoter-TSS (NM_008514) promoter-TSS (NM_008514) -11 NM_008514 16974 Mm.321990 NM_008514 ENSMUSG00000030201 Lrp6 C030016K15Rik|Cd|Gw|ska26|ska|skax26 low density lipoprotein receptor-related protein 6 protein-coding common_peak1_318_2900_0.0897101474424247_11.5471896539192_1.56955463590232 chr5 20949851 20952324 + 1.56955463590232 NA promoter-TSS (NR_030699) promoter-TSS (NR_030699) 98 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak2_202_1632_0.118890348216343_10.7327542496699_1.56926463468803 chr5 118559474 118562067 + 1.56926463468803 NA promoter-TSS (NM_172424) promoter-TSS (NM_172424) 51 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_45_232_0.300886970625585_8.01462962996707_1.5690558792653 chr2 163703571 163704716 + 1.5690558792653 NA intron (NM_001277096, intron 2 of 3) intron (NM_001277096, intron 2 of 3) 10106 NM_011106 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak2_45_232_0.300886970625585_8.01462962996707_1.5690558792653 chr6 106793670 106794892 + 1.5690558792653 NA exon (NM_021449, exon 4 of 11) exon (NM_021449, exon 4 of 11) 5806 NM_021449 58799 Mm.290085 NM_021449 ENSMUSG00000005362 Crbn 2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL cereblon protein-coding common_peak2_45_232_0.300886970625585_8.01462962996707_1.5690558792653-2 chr8 69192910 69194035 + 1.5690558792653 NA Intergenic Intergenic -15574 NM_001013379 234358 Mm.334577 NM_001013379 ENSMUSG00000059897 Zfp930 - zinc finger protein 930 protein-coding common_peak1_45_232_0.300886970625585_8.01462962996707_1.5690558792653-2 chr7 125555190 125556054 + 1.5690558792653 NA intron (NM_001008700, intron 1 of 10) intron (NM_001008700, intron 1 of 10) 3340 NM_001008700 16190 Mm.233802 NM_010557 ENSMUSG00000030748 Il4ra CD124|Il4r interleukin 4 receptor, alpha protein-coding common_peak1_250_2140_0.103728400428489_11.1159332805998_1.56874159892825 chr7 101905182 101907332 + 1.56874159892825 NA intron (NM_025605, intron 1 of 4) CpG 102 NM_001081679 791260 Mm.475469 NM_001081679 ENSMUSG00000078630 Tomt Comt2|F930017I19Rik transmembrane O-methyltransferase protein-coding common_peak2_77_632_-0.206505928634124_9.20280872511128_1.56873637083236-2 chr4 133665526 133667628 + 1.56873637083236 NA intron (NM_178698, intron 2 of 3) L2|LINE|L2 6070 NM_001145955 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak2_77_632_-0.206505928634124_9.20280872511128_1.56873637083236 chr2 109280101 109281718 + 1.56873637083236 NA intron (NM_139303, intron 1 of 16) CpG 171 NM_139303 228421 Mm.274086 NM_139303 ENSMUSG00000027115 Kif18a AU024633|B130001M12Rik|gcd2 kinesin family member 18A protein-coding common_peak2_77_632_-0.206505928634124_9.20280872511128_1.56873637083236-3 chr9 108078362 108079801 + 1.56873637083236 NA 5' UTR (NM_001311152, exon 1 of 39) 5' UTR (NM_001311152, exon 1 of 39) 220 NM_001311152 84585 Mm.379272 NM_032543 ENSMUSG00000041528 Rnf123 BC003945|Kpc1 ring finger protein 123 protein-coding common_peak1_77_632_-0.206505928634124_9.20280872511128_1.56873637083236 chr13 36117271 36118191 + 1.56873637083236 NA promoter-TSS (NM_001039189) promoter-TSS (NM_001039189) 88 NM_001039189 69955 Mm.70690 NM_024274 ENSMUSG00000021420 Fars2 Fars1|pheRS phenylalanine-tRNA synthetase 2 (mitochondrial) protein-coding common_peak2_273_2392_0.0983451861827174_11.2737772746299_1.56804402320001 chr6 48645707 48649714 + 1.56804402320001 NA intron (NM_212486, intron 1 of 4) intron (NM_212486, intron 1 of 4) 349 NM_212486 243374 Mm.86514 NM_212486 ENSMUSG00000064262 Gimap8 Gm457|IAN9|IMAP8 GTPase, IMAP family member 8 protein-coding common_peak1_44_339_-0.283212298573071_8.26778478685117_1.5679601152948 chr19 11044495 11045228 + 1.5679601152948 NA Intergenic Intergenic 5705 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA common_peak2_126_893_0.158079672990727_9.88317085767868_1.56770374255047 chr4 15265003 15266867 + 1.56770374255047 NA 5' UTR (NM_181401, exon 1 of 3) 5' UTR (NM_181401, exon 1 of 3) 115 NM_181401 100201 Mm.394111 NM_181401 ENSMUSG00000043252 Tmem64 9630015D15Rik|AI790744|AV300874 transmembrane protein 64 protein-coding common_peak2_115_998_-0.162452930907136_9.88311440233885_1.56770374255007 chr12 112941307 112942781 + 1.56770374255007 NA promoter-TSS (NM_001316724) promoter-TSS (NM_001316724) 98 NM_025399 66174 Mm.7070 NM_025399 ENSMUSG00000002804 Nudt14 1110030M18Rik|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding common_peak2_115_998_-0.162452930907136_9.88311440233885_1.56770374255007-2 chr3 90253749 90255635 + 1.56770374255007 NA intron (NM_028881, intron 1 of 13) intron (NM_028881, intron 1 of 13) 411 NM_028881 74343 Mm.35627 NM_028881 ENSMUSG00000027936 Crtc2 4632407F12Rik|Torc2|mTORC2 CREB regulated transcription coactivator 2 protein-coding common_peak1_22_88_0.462727373127112_6.70709711752995_1.56756486921162 chr5 36988483 36988942 + 1.56756486921162 NA intron (NM_011716, intron 1 of 7) CpG 270 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin Wolfram syndrome 1 homolog (human) protein-coding unique_peak2_22_88_0.462727373127112_6.70709711752995_1.56756486921162 chr19 56759960 56760717 + 1.56756486921162 NA Intergenic Intergenic 37966 NM_007419 11554 Mm.46797 NM_007419 ENSMUSG00000035283 Adrb1 Adrb-1|beta-AR adrenergic receptor, beta 1 protein-coding common_peak2_22_88_0.462727373127112_6.70709711752995_1.56756486921162 chr10 81978616 81979155 + 1.56756486921162 NA Intergenic CpG -48405 NM_199062 331188 Mm.351497 NM_199062 ENSMUSG00000096718 Zfp781 A130081B01 zinc finger protein 781 protein-coding common_peak1_22_88_0.462727373127112_6.70709711752995_1.56756486921162-2 chr8 11477244 11477725 + 1.56756486921162 NA promoter-TSS (NR_126558) promoter-TSS (NR_126558) -445 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak1_33_249_-0.33563571250156_7.79796642841131_1.56732031610934-3 chr2 79370385 79370951 + 1.56732031610934 NA intron (NM_001048176, intron 2 of 12) intron (NM_001048176, intron 2 of 12) 58320 NM_001048176 228094 Mm.440704 NM_001033295 ENSMUSG00000075256 Cerkl Gm1958|Rp26 ceramide kinase-like protein-coding common_peak1_33_249_-0.33563571250156_7.79796642841131_1.56732031610934-2 chr18 36454013 36454646 + 1.56732031610934 NA intron (NM_026027, intron 1 of 3) intron (NM_026027, intron 1 of 3) 166 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak1_33_249_-0.33563571250156_7.79796642841131_1.56732031610934 chr11 114907043 114907708 + 1.56732031610934 NA Intergenic (TAG)n|Simple_repeat|Simple_repeat 17334 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding common_peak1_52_407_-0.256683576528383_8.5440835537073_1.56723934081083 chr5 139299347 139299976 + 1.56723934081083 NA intron (NM_172723, intron 3 of 10) C-rich|Low_complexity|Low_complexity 25803 NM_172723 231821 Mm.297819 NM_172723 ENSMUSG00000056413 Adap1 4930431P11Rik|Centa1|GC1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding common_peak1_49_260_0.284721506752856_8.17026674994631_1.5669715098415 chr4 156066958 156067875 + 1.5669715098415 NA Intergenic Intergenic -7614 NR_132444 100415901 Mm.437006 NR_132444 ENSMUSG00000086549 Gm13648 OTTMUSG00000013217 predicted gene 13648 ncRNA common_peak2_165_1515_-0.129935857816388_10.5010861092629_1.56689842394487-2 chr6 83053372 83055615 + 1.56689842394487 NA promoter-TSS (NM_019752) promoter-TSS (NM_019752) -28 NR_125891 11993 Mm.386752 NM_007517 ENSMUSG00000068328 Aup1 AA589454 ancient ubiquitous protein 1 protein-coding common_peak2_165_1515_-0.129935857816388_10.5010861092629_1.56689842394487 chr11 87735807 87738596 + 1.56689842394487 NA promoter-TSS (NM_009296) promoter-TSS (NM_009296) -364 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding common_peak1_34_159_0.359517619636171_7.50168690470545_1.56672905247828 chr13 91091343 91091972 + 1.56672905247828 NA intron (NM_025770, intron 3 of 7) intron (NM_025770, intron 3 of 7) 132330 NM_025770 66795 Mm.235385 NM_025770 ENSMUSG00000021619 Atg10 5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l autophagy related 10 protein-coding common_peak2_82_678_-0.197761895076384_9.30838681670654_1.56658169669216 chr17 12768089 12770176 + 1.56658169669216 NA intron (NM_010515, intron 1 of 47) CpG 574 NM_010515 16004 Mm.26553 NM_010515 ENSMUSG00000023830 Igf2r AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300 insulin-like growth factor 2 receptor protein-coding common_peak2_90_578_0.194925504730811_9.27488229035464_1.56623371417105 chr2 127586990 127587919 + 1.56623371417105 NA promoter-TSS (NM_029963) promoter-TSS (NM_029963) 28 NM_029963 77721 Mm.274601 NM_029963 ENSMUSG00000027374 Mrps5 1620401I16Rik|AI850294 mitochondrial ribosomal protein S5 protein-coding common_peak1_134_966_0.152941074241074_9.99384261659738_1.56568170821213 chr5 122421754 122423253 + 1.56568170821213 NA promoter-TSS (NM_019805) promoter-TSS (NM_019805) 59 NM_019805 56317 Mm.37341 NM_019805 ENSMUSG00000029466 Anapc7 APC7|AW545589 anaphase promoting complex subunit 7 protein-coding common_peak1_163_1494_-0.131261881647328_10.4802988282618_1.56537919398803 chr1 9747127 9748442 + 1.56537919398803 NA exon (NM_173443, exon 1 of 3) exon (NM_173443, exon 1 of 3) 136 NR_040462 73331 Mm.460470 NR_040462 1700034P13Rik - RIKEN cDNA 1700034P13 gene ncRNA common_peak2_176_1634_-0.125413999190336_10.6123679207903_1.56459017501881 chr3 103913395 103916180 + 1.56459017501881 NA exon (NM_172684, exon 1 of 7) exon (NM_172684, exon 1 of 7) 667 NM_172684 229675 Mm.29366 NM_172684 ENSMUSG00000044098 Rsbn1 C230004D03Rik|E330004N01|Rosbin|Rsbn|Rsbp|mKIAA3002 rosbin, round spermatid basic protein 1 protein-coding common_peak2_176_1634_-0.125413999190336_10.6123679207903_1.56459017501881-2 chr9 73044095 73046464 + 1.56459017501881 NA intron (NM_023635, intron 1 of 5) intron (NM_023635, intron 1 of 5) 469 NM_001301230 11891 Mm.34867 NM_023635 ENSMUSG00000032202 Rab27a 2210402C08Rik|2410003M20Rik|4933437C11Rik|ash RAB27A, member RAS oncogene family protein-coding common_peak1_39_298_-0.306255135380972_8.07087410650762_1.56436261179921 chr4 155562889 155563620 + 1.56436261179921 NA promoter-TSS (NM_001159637) promoter-TSS (NM_001159637) -561 NM_001159637 192185 Mm.28347 NM_138671 ENSMUSG00000029063 Nadk 4432404C02Rik|BC004012 NAD kinase protein-coding common_peak1_231_1936_0.108892009468383_10.9740542433374_1.56424108342145 chr7 125551723 125553529 + 1.56424108342145 NA intron (NM_001008700, intron 1 of 10) intron (NM_001008700, intron 1 of 10) 344 NM_001008700 16190 Mm.233802 NM_010557 ENSMUSG00000030748 Il4ra CD124|Il4r interleukin 4 receptor, alpha protein-coding common_peak1_269_2690_-0.0970012107361455_11.3454260702723_1.56410614691202 chr4 102516025 102519297 + 1.56410614691202 NA intron (NM_019840, intron 5 of 14) intron (NM_019840, intron 5 of 14) -52399 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak1_77_472_0.213859387454823_8.99262606706681_1.5632133562431 chr9 66898135 66899381 + 1.5632133562431 NA intron (NM_173413, intron 1 of 7) intron (NM_173413, intron 1 of 7) 20947 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding common_peak1_65_522_-0.226734877399705_8.91729969754709_1.56282123902677 chr14 70799774 70800956 + 1.56282123902677 NA Intergenic Intergenic 25984 NM_010071 13449 Mm.243323 NM_010071 ENSMUSG00000022102 Dok2 DokR|Frip docking protein 2 protein-coding common_peak2_101_859_-0.173909761275647_9.66123796895164_1.56220178934741 chr3 99140610 99142289 + 1.56220178934741 NA intron (NM_027462, intron 1 of 5) CpG 359 NM_027462 70560 Mm.316754 NM_027462 ENSMUSG00000004233 Wars2 5730427B17Rik|9430020O07Rik|AI413375|TrpRS tryptophanyl tRNA synthetase 2 (mitochondrial) protein-coding common_peak1_339_3144_0.0860221684585536_11.6618553859959_1.56202568958327 chr17 29031333 29033801 + 1.56202568958327 NA promoter-TSS (NM_013663) promoter-TSS (NM_013663) -93 NM_013663 20383 Mm.6787 NM_013663 ENSMUSG00000071172 Srsf3 AL024116|Sfrs3|X16 serine/arginine-rich splicing factor 3 protein-coding common_peak1_123_1078_-0.155572322380998_9.99769298829752_1.56197134895199 chr19 26606762 26608028 + 1.56197134895199 NA intron (NM_011416, intron 1 of 32) CpG 2235 NM_011416 67155 Mm.342988 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding common_peak2_123_1078_-0.155572322380998_9.99769298829752_1.56197134895199 chr9 71484583 71486469 + 1.56197134895199 NA promoter-TSS (NM_001164793) promoter-TSS (NM_001164793) 457 NM_178602 28015 Mm.21094 NM_178602 ENSMUSG00000032199 Polr2m AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185 polymerase (RNA) II (DNA directed) polypeptide M protein-coding common_peak2_55_433_-0.248374171240197_8.63736414682438_1.56081388525918 chr4 150894164 150896455 + 1.56081388525918 NA Intergenic Intergenic 14612 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak2_32_241_-0.341543289613715_7.74809159246774_1.56048990332104-2 chr5 52741336 52742291 + 1.56048990332104 NA exon (NM_028744, exon 1 of 10) exon (NM_028744, exon 1 of 10) 239 NM_025951 67073 Mm.248647 NM_025951 ENSMUSG00000029186 Pi4k2b 2610042N09Rik|4933409G22Rik phosphatidylinositol 4-kinase type 2 beta protein-coding common_peak1_32_241_-0.341543289613715_7.74809159246774_1.56048990332104 chr6 129575476 129576152 + 1.56048990332104 NA Intergenic Intergenic -2472 NM_153590 243655 Mm.30968 NM_153590 ENSMUSG00000050241 Klre1 Klre-1|NKG2I killer cell lectin-like receptor family E member 1 protein-coding common_peak2_32_241_-0.341543289613715_7.74809159246774_1.56048990332104 chr3 88057808 88058952 + 1.56048990332104 NA exon (NM_144897, exon 1 of 6) exon (NM_144897, exon 1 of 6) 115 NM_144897 246703 Mm.205996 NM_144897 ENSMUSG00000028070 Apoa1bp AA087124|AI-BP|AIBP|Apoa1ip|ESTM37|Naxe apolipoprotein A-I binding protein protein-coding common_peak1_74_448_0.21957807354852_8.92036067151541_1.56021709346977 chr12 3806461 3807661 + 1.56021709346977 NA promoter-TSS (NM_007872) promoter-TSS (NM_007872) 81 NM_007872 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding common_peak2_199_1886_-0.116026581904993_10.8238654166479_1.56012501883193 chr12 64964548 64966942 + 1.56012501883193 NA promoter-TSS (NM_025707) promoter-TSS (NM_025707) 3 NM_177805 328108 Mm.138465 NM_177805 ENSMUSG00000035614 Fam179b A430041B07Rik|BC062107|C130034K06|mKIAA0423 family with sequence similarity 179, member B protein-coding common_peak1_44_225_0.305999675149444_7.97317879998991_1.55979673015582 chr5 142904333 142905083 + 1.55979673015582 NA exon (NM_007393, exon 4 of 6) exon (NM_007393, exon 4 of 6) 2046 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_52_281_0.276190413044318_8.27764655892095_1.55978715074039 chr9 110664496 110665409 + 1.55978715074039 NA intron (NM_028312, intron 1 of 6) B3|SINE|B2 8449 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_84_697_-0.195441378357161_9.34936253703107_1.55948705159678 chr6 125352702 125353824 + 1.55948705159678 NA intron (NM_011609, intron 1 of 9) intron (NM_011609, intron 1 of 9) 3540 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding common_peak2_168_1547_-0.128375907615_10.5320018023369_1.55910585447968 chr3 19627668 19629865 + 1.55910585447968 NA Intergenic Intergenic -15694 NM_001081281 381485 Mm.35419 NM_001081281 ENSMUSG00000060913 Trim55 D830041C10Rik|Murf2|Rnf29 tripartite motif-containing 55 protein-coding common_peak2_139_1241_-0.143779121324236_10.2065598975584_1.55842630723465 chr19 42518236 42519679 + 1.55842630723465 NA intron (NM_177464, intron 1 of 6) CpG 152 NM_177464 52013 Mm.254169 NM_177464 ENSMUSG00000025184 R3hcc1l 1700036B12Rik|AI450607|C10orf28|D19Ertd386e|GIDRP86|Gidrp88 R3H domain and coiled-coil containing 1 like protein-coding common_peak2_179_1666_-0.123635129049074_10.6412208244619_1.55809143689025 chr2 120152732 120155491 + 1.55809143689025 NA intron (NM_133838, intron 1 of 5) CpG 464 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding common_peak1_265_2642_-0.0974480857928537_11.3192366667451_1.55793465457263 chr3 90079511 90080926 + 1.55793465457263 NA intron (NM_001271764, intron 1 of 8) CpG 697 NM_001293749 59069 Mm.240839 NM_022314 ENSMUSG00000027940 Tpm3 TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm tropomyosin 3, gamma protein-coding common_peak1_137_1221_-0.14582093838558_10.1821181006259_1.5577564273425 chr14 26636986 26638022 + 1.5577564273425 NA promoter-TSS (NM_007479) promoter-TSS (NM_007479) -693 NM_007479 11843 Mm.297768 NM_007479 ENSMUSG00000021877 Arf4 AA407803 ADP-ribosylation factor 4 protein-coding common_peak1_59_333_0.251564451310008_8.50948651812906_1.55774671277073 chr4 140814127 140814923 + 1.55774671277073 NA 3' UTR (NM_011059, exon 16 of 16) 3' UTR (NM_011059, exon 16 of 16) 3532 NR_045944 100049161 Mm.20854 NR_045944 ENSMUSG00000085918 Gm13032 OTTMUSG00000010086 predicted gene 13032 ncRNA common_peak2_96_811_-0.179997553821767_9.57533714027429_1.55752547106964 chr3 90490166 90491590 + 1.55752547106964 NA exon (NM_133854, exon 1 of 4) exon (NM_133854, exon 1 of 4) 135 NM_133854 20615 Mm.331182 NM_133854 ENSMUSG00000001018 Snapin 25kDa|AA407989|AV026596|Bloc1s7|Snap25bp|Snapap SNAP-associated protein protein-coding common_peak1_13_42_0.633687684129472_5.74310859676683_1.55729322517715 chr16 20716361 20716681 + 1.55729322517715 NA 5' UTR (NM_009900, exon 1 of 24) 5' UTR (NM_009900, exon 1 of 24) 115 NM_009900 12724 Mm.177761 NM_009900 ENSMUSG00000022843 Clcn2 AL118368|ClC-2|Clc2|nmf240 chloride channel, voltage-sensitive 2 protein-coding unique_peak2_13_42_0.633687684129472_5.74310859676683_1.55729322517715 chr16 95728556 95728936 + 1.55729322517715 NA Intergenic (TC)n|Simple_repeat|Simple_repeat 26339 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding unique_peak1_13_42_0.633687684129472_5.74310859676683_1.55729322517715 chr1 16518942 16519264 + 1.55729322517715 NA intron (NM_025303, intron 1 of 13) intron (NM_025303, intron 1 of 13) 199 NM_025303 29819 Mm.216257 NM_025303 ENSMUSG00000025920 Stau2 - staufen (RNA binding protein) homolog 2 (Drosophila) protein-coding common_peak1_33_153_0.363362031465626_7.44846755642771_1.55725718109289 chr4 145250253 145250963 + 1.55725718109289 NA Intergenic B2_Mm2|SINE|B2 -3738 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak2_33_153_0.363362031465626_7.44846755642771_1.55725718109289 chr19 8943956 8945327 + 1.55725718109289 NA intron (NM_011842, intron 3 of 17) L1M5|LINE|L1 2721 NM_011842 23942 Mm.25339 NM_011842 ENSMUSG00000071646 Mta2 AW550797|Mata1l1|Mta1l1|mmta2 metastasis-associated gene family, member 2 protein-coding common_peak2_33_153_0.363362031465626_7.44846755642771_1.55725718109289 chr1 21328260 21329226 + 1.55725718109289 NA Intergenic Intergenic -20934 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_62_355_0.245875728985384_8.59867129545909_1.55712465865199 chr7 101354093 101355110 + 1.55712465865199 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) 6532 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_123_866_0.160018643885184_9.83989750516443_1.5571206291052 chr11 62643390 62645680 + 1.5571206291052 NA intron (NM_198861, intron 1 of 3) ORR1F|LTR|ERVL-MaLR 3988 NM_198861 192976 Mm.339972 NM_198861 ENSMUSG00000046417 Lrrc75a Fam211a leucine rich repeat containing 75A protein-coding unique_peak2_14_105_-0.545876333151851_6.45498228798727_1.55705400400628 chr11 104599085 104599846 + 1.55705400400628 NA Intergenic Intergenic -8535 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak2_10_77_-0.652216787354653_5.95929382518492_1.55705293866514-2 chr11 51933199 51933816 + 1.55705293866514 NA Intergenic Intergenic -34124 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding unique_peak2_10_77_-0.652216787354653_5.95929382518492_1.55705293866514 chr1 183349304 183349991 + 1.55705293866514 NA intron (NM_177389, intron 6 of 26) RSINE1|SINE|B4 19918 NM_177389 338366 Mm.41152 NM_177389 Mia3 9130229H14Rik|A930039G15Rik|AU022327|B230399H06Rik|C80126|Gm1525|TANGO1|Tango melanoma inhibitory activity 3 protein-coding unique_peak2_10_77_-0.652216787354653_5.95929382518492_1.55705293866514-4 chr9 124110085 124110883 + 1.55705293866514 NA Intergenic ORR1C1|LTR|ERVL-MaLR 8301 NM_009915 12772 Mm.6272 NM_009915 ENSMUSG00000049103 Ccr2 Cc-ckr-2|Ccr2a|Ccr2b|Ckr2|Ckr2a|Ckr2b|Cmkbr2|mJe-r chemokine (C-C motif) receptor 2 protein-coding unique_peak2_10_77_-0.652216787354653_5.95929382518492_1.55705293866514-3 chr7 128611349 128611858 + 1.55705293866514 NA exon (NM_178641, exon 1 of 20) exon (NM_178641, exon 1 of 20) 238 NM_178641 101490 Mm.490344 NM_178641 ENSMUSG00000042105 Inpp5f 5830435P03Rik|AI115354|AW561896|SAC2|cI-27|hSAC2|mKIAA0966 inositol polyphosphate-5-phosphatase F protein-coding common_peak1_48_253_0.288191550138519_8.13278046184142_1.55630819928392 chr1 64796731 64797439 + 1.55630819928392 NA intron (NM_001039493, intron 7 of 7) MIRb|SINE|MIR -59335 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak2_68_401_0.231543629067867_8.76682350571286_1.55629823133972 chr7 80260686 80261955 + 1.55629823133972 NA TTS (NM_177765) TTS (NM_177765) 105 NM_031375 83485 Mm.21175 NM_031375 ENSMUSG00000047084 Ngrn AW552001 neugrin, neurite outgrowth associated protein-coding common_peak1_47_364_-0.271364874488928_8.37607021652292_1.55617090177075 chr14 69555254 69556010 + 1.55617090177075 NA promoter-TSS (NR_045091).2 promoter-TSS (NR_045091).2 231 NM_026174 67464 Mm.489765 NM_026174 ENSMUSG00000095463 Entpd4 1200014F22Rik|4930513O14Rik|A430102M06Rik|AI414893|Lysal1|mKIAA0392 ectonucleoside triphosphate diphosphohydrolase 4 protein-coding common_peak1_86_715_-0.191017946598404_9.38830680396505_1.5549759175088 chr14 36968069 36968724 + 1.5549759175088 NA intron (NM_027045, intron 1 of 10) CpG 368 NM_027045 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding common_peak1_133_957_0.1532741655999_9.98051892853613_1.55425012321404 chr11 119299234 119300086 + 1.55425012321404 NA intron (NM_138669, intron 1 of 11) CpG 383 NM_138669 192170 Mm.197555 NM_138669 ENSMUSG00000025580 Eif4a3 2400003O03Rik|Ddx48|eIF4A-III|mKIAA0111 eukaryotic translation initiation factor 4A3 protein-coding common_peak1_58_460_-0.243096535387513_8.72707467273558_1.55423876675784 chr12 102705026 102705520 + 1.55423876675784 NA promoter-TSS (NM_172584) promoter-TSS (NM_172584) -404 NM_172584 217837 Mm.482192 NM_172584 ENSMUSG00000057963 Itpk1 BC031182 inositol 1,3,4-triphosphate 5/6 kinase protein-coding common_peak1_145_1070_0.144188572821729_10.1368370511611_1.55358097700508 chr5 103912803 103915171 + 1.55358097700508 NA Intergenic Intergenic -2758 NM_178741 246293 Mm.179871 NM_178741 ENSMUSG00000029312 Klhl8 2310001P09Rik|D5Ertd431e kelch-like 8 protein-coding common_peak2_135_976_0.151158442564856_10.0077939732508_1.55339797509721 chr6 83165103 83166529 + 1.55339797509721 NA promoter-TSS (NM_001198866) promoter-TSS (NM_001198866) -108 NM_001198866 13191 Mm.6919 NM_007835 ENSMUSG00000031865 Dctn1 AL022633|DAP-150|DP-150|Glued|p150|p150-glued|p150 dynactin 1 protein-coding common_peak1_240_2033_0.105747531397149_11.0429777295561_1.55297181407585 chr12 99941017 99944015 + 1.55297181407585 NA intron (NM_028354, intron 14 of 15) intron (NM_028354, intron 14 of 15) -21983 NM_001164426 217826 Mm.312335 NM_146037 ENSMUSG00000045404 Kcnk13 BB085247|F730021E22Rik|Gm1570|Gm1685 potassium channel, subfamily K, member 13 protein-coding common_peak1_114_785_0.168180888713223_9.70247594661522_1.55203933593157 chr11 100737042 100738309 + 1.55203933593157 NA intron (NM_001305003, intron 1 of 5) intron (NM_001305003, intron 1 of 5) 540 NM_024456 19345 Mm.29829 NM_024456 ENSMUSG00000019173 Rab5c AI326010|Rabl RAB5C, member RAS oncogene family protein-coding common_peak1_78_640_-0.202081455505425_9.22313981886603_1.55176383043093 chr10 117925452 117926450 + 1.55176383043093 NA intron (NR_045342, intron 1 of 3) B3|SINE|B2 492 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_78_640_-0.202081455505425_9.22313981886603_1.55176383043093-2 chr3 138527298 138528041 + 1.55176383043093 NA intron (NM_007917, intron 2 of 7) CpG 401 NM_001313980 13684 Mm.3941 NM_007917 ENSMUSG00000028156 Eif4e EG668879|Eif4e-ps|If4e|eIF-4E eukaryotic translation initiation factor 4E protein-coding common_peak2_78_640_-0.202081455505425_9.22313981886603_1.55176383043093 chr19 18712348 18714010 + 1.55176383043093 NA promoter-TSS (NM_177640) promoter-TSS (NM_177640) -57 NM_177640 225995 Mm.28101 NM_177640 ENSMUSG00000047044 D030056L22Rik - RIKEN cDNA D030056L22 gene protein-coding common_peak1_64_513_-0.228710028860982_8.89126953476339_1.55134369440781 chr16 3908176 3908902 + 1.55134369440781 NA promoter-TSS (NM_029738) promoter-TSS (NM_029738) 150 NM_028484 73261 Mm.486226 NM_028484 ENSMUSG00000005983 1700037C18Rik 2810022L20Rik RIKEN cDNA 1700037C18 gene protein-coding common_peak2_64_513_-0.228710028860982_8.89126953476339_1.55134369440781 chr3 37455397 37457392 + 1.55134369440781 NA intron (NM_001310473, intron 11 of 16) intron (NM_001310473, intron 11 of 16) 36444 NM_021343 57815 Mm.172679 NM_021343 ENSMUSG00000027722 Spata5 2510048F20Rik|C78064|Spaf spermatogenesis associated 5 protein-coding common_peak2_228_1905_0.109135490848232_10.9509001493341_1.55131380403772 chr19 10276474 10281045 + 1.55131380403772 NA intron (NM_198114, intron 1 of 19) intron (NM_198114, intron 1 of 19) 26118 NM_198114 269060 Mm.329718 NM_198114 ENSMUSG00000035735 Dagla Nsddr diacylglycerol lipase, alpha protein-coding common_peak2_109_937_-0.165540782943104_9.79067372104382_1.55106868834133 chr1 164933374 164936678 + 1.55106868834133 NA intron (NM_008510, intron 1 of 2) intron (NM_008510, intron 1 of 2) 484 NM_008510 16963 Mm.190 NM_008510 ENSMUSG00000026573 Xcl1 AI661682|ATAC|LTN|Lptn|SCM-1|SCM-1a|Scyc1 chemokine (C motif) ligand 1 protein-coding common_peak2_154_1398_-0.135392455552127_10.3824840193887_1.55105074870506 chr11 106485938 106488845 + 1.55105074870506 NA intron (NM_023913, intron 1 of 21) CpG 405 NM_023913 78943 Mm.340943 NM_023913 ENSMUSG00000020715 Ern1 9030414B18Rik|AI225830|C85377|Ire1a|Ire1alpha|Ire1p endoplasmic reticulum (ER) to nucleus signalling 1 protein-coding common_peak1_100_849_-0.174470837419607_9.64408361231526_1.55098532495947 chr11 46325266 46326680 + 1.55098532495947 NA 3' UTR (NM_010583, exon 17 of 17) 3' UTR (NM_010583, exon 17 of 17) -13114 NM_001252459 76884 Mm.154358 NM_133769 ENSMUSG00000020340 Cyfip2 1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168 cytoplasmic FMR1 interacting protein 2 protein-coding common_peak2_100_849_-0.174470837419607_9.64408361231526_1.55098532495947 chr9 92272935 92275511 + 1.55098532495947 NA Intergenic Intergenic -1379 NM_008880 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding common_peak1_54_424_-0.250028012639149_8.60630502470549_1.55067549843317 chr16 15636571 15637405 + 1.55067549843317 NA promoter-TSS (NM_011159) promoter-TSS (NM_011159) 412 NM_008565 17217 Mm.1500 NM_008565 ENSMUSG00000022673 Mcm4 19G|AI325074|AU045576|Cdc21|Mcmd4|mKIAA4003|mcdc21 minichromosome maintenance complex component 4 protein-coding common_peak2_175_1360_0.129183324749025_10.4750430138785_1.55065749064509 chrX 159253952 159257389 + 1.55065749064509 NA promoter-TSS (NM_148945) promoter-TSS (NM_148945) -112 NM_148945 110651 Mm.328476 NM_148945 ENSMUSG00000031309 Rps6ka3 MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2 ribosomal protein S6 kinase polypeptide 3 protein-coding common_peak1_251_2478_-0.10070877376223_11.2251881692056_1.55048880411772 chr6 54816402 54818699 + 1.55048880411772 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 634 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak2_209_1706_0.114945198835438_10.7947199424455_1.55043708010681 chr4 43957179 43961459 + 1.55043708010681 NA intron (NM_027450, intron 1 of 4) intron (NM_027450, intron 1 of 4) 1617 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak2_292_2605_0.0939722946247148_11.3946075158805_1.55011104308465 chr2 84714085 84717536 + 1.55011104308465 NA promoter-TSS (NM_144887) promoter-TSS (NM_144887) -646 NM_144887 228136 Mm.288508 NM_144887 ENSMUSG00000034075 Zdhhc5 1110032A17Rik|AI451382|Zisp zinc finger, DHHC domain containing 5 protein-coding common_peak1_37_281_-0.312574837815547_7.98326393349102_1.54984742890168 chr5 134590010 134590769 + 1.54984742890168 NA intron (NM_020022, intron 4 of 10) B1_Mus1|SINE|Alu 7699 NM_020022 19718 Mm.332739 NM_020022 ENSMUSG00000023104 Rfc2 2610008M13Rik|40kDa|AI326953|Recc2 replication factor C (activator 1) 2 protein-coding unique_peak2_37_281_-0.312574837815547_7.98326393349102_1.54984742890168 chr4 102634857 102636309 + 1.54984742890168 NA Intergenic MER102b|DNA|hAT-Charlie 45740 NM_001177981 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak1_37_281_-0.312574837815547_7.98326393349102_1.54984742890168-2 chr6 39333462 39334347 + 1.54984742890168 NA TTS (NM_028123) TTS (NM_028123) 43803 NM_028123 72144 Mm.482167 NM_028123 ENSMUSG00000029924 Slc37a3 2610507O21Rik|AU044904 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 protein-coding common_peak1_148_1334_-0.137699024467295_10.3137745143413_1.54973424107682 chr7 28765333 28766561 + 1.54973424107682 NA promoter-TSS (NM_001122765) promoter-TSS (NM_001122765) 697 NM_001306222 18036 Mm.220333 NM_010908 ENSMUSG00000030595 Nfkbib I(Kappa)B(beta)|I-kappa-B-beta|IKB-beta|IKappaBbeta|IkB|IkBb|NF-kappa-BIB|ikB-B nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta protein-coding common_peak2_42_322_-0.289663184439974_8.19055876247394_1.54963184784876 chr4 115838630 115839814 + 1.54963184784876 NA promoter-TSS (NM_001285488) promoter-TSS (NM_001285488) 24 NM_001285487 17346 Mm.209327 NM_021461 ENSMUSG00000028708 Mknk1 2410048M24Rik|Mnk1 MAP kinase-interacting serine/threonine kinase 1 protein-coding common_peak1_88_734_-0.188582070959539_9.42730940424396_1.54919487794075 chr14 72862173 72863696 + 1.54919487794075 NA Intergenic Intergenic -152931 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding common_peak1_83_687_-0.195565488530887_9.32848201043666_1.54886886978326 chr6 97386810 97388203 + 1.54886886978326 NA intron (NM_145148, intron 6 of 23) intron (NM_145148, intron 6 of 23) -134726 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_217_2087_-0.109551449853893_10.9731302716429_1.54870895696286 chr14 79586835 79588449 + 1.54870895696286 NA promoter-TSS (NM_026474) promoter-TSS (NM_026474) -49 NM_026474 67955 Mm.18972 NM_026474 ENSMUSG00000022024 Sugt1 2410174K12Rik|SGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) protein-coding common_peak2_30_225_-0.353496757680881_7.64343058357475_1.54854963372377 chrX 50579871 50581236 + 1.54854963372377 NA intron (NR_015505, intron 15 of 19) intron (NR_015505, intron 15 of 19) 43164 NR_131207 102639259 Mm.350898 NR_131207 Gm35612 - predicted gene, 35612 ncRNA unique_peak2_30_225_-0.353496757680881_7.64343058357475_1.54854963372377 chr19 56771565 56772963 + 1.54854963372377 NA Intergenic Intergenic 41419 NM_170757 213993 Mm.469677 NM_170757 ENSMUSG00000035173 Ccdc186 1810028B20Rik|A630007B06Rik|AI159700|Otg1 coiled-coil domain containing 186 protein-coding common_peak1_32_147_0.36786658203193_7.39338665664491_1.54834518854012 chr7 125707870 125708587 + 1.54834518854012 NA promoter-TSS (NM_207239) promoter-TSS (NM_207239) 352 NM_001081022 233865 Mm.274389 NM_001081022 ENSMUSG00000032743 D430042O09Rik Kiaa0556 RIKEN cDNA D430042O09 gene protein-coding common_peak2_173_1341_0.129241185652026_10.4547895490262_1.54829308906384 chr2 32552790 32555021 + 1.54829308906384 NA intron (NM_153560, intron 1 of 10) intron (NM_153560, intron 1 of 10) -16953 NM_010073 13481 Mm.22001 NM_010073 ENSMUSG00000026810 Dpm2 AW557993|R75484 dolichol-phosphate (beta-D) mannosyltransferase 2 protein-coding common_peak1_118_821_0.164077786557961_9.76503347696066_1.54825537867355 chr15 37458150 37459412 + 1.54825537867355 NA intron (NM_001170867, intron 1 of 4) intron (NM_001170867, intron 1 of 4) 601 NM_001170867 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak2_38_185_0.33378463849983_7.70605113035795_1.54820294452535 chr2 5894732 5895445 + 1.54820294452535 NA intron (NM_021305, intron 1 of 11) CpG 265 NM_021305 57743 Mm.21435 NM_021305 ENSMUSG00000025816 Sec61a2 - Sec61, alpha subunit 2 (S. cerevisiae) protein-coding common_peak2_38_185_0.33378463849983_7.70605113035795_1.54820294452535-2 chr3 116507284 116508416 + 1.54820294452535 NA exon (NM_025517, exon 2 of 11) exon (NM_025517, exon 2 of 11) 325 NM_025517 66368 Mm.251228 NM_025517 ENSMUSG00000000339 Rtca 2310009A18Rik|AI450277|RPC|Rtcd1 RNA 3'-terminal phosphate cyclase protein-coding common_peak1_144_1293_-0.140853000601618_10.2671954016917_1.54797595208993 chr17 55891559 55893009 + 1.54797595208993 NA intron (NM_145490, intron 1 of 3) CpG 191 NM_145490 224893 Mm.294853 NM_145490 ENSMUSG00000003198 Zfp959 - zinc finger protein 959 protein-coding common_peak2_244_2396_-0.102032369860128_11.1759980087191_1.54764436571008 chr9 65194414 65197630 + 1.54764436571008 NA Intergenic Intergenic -18668 NM_177460 214424 Mm.31129 NM_177460 ENSMUSG00000032392 Parp16 ARTD15|BC055447|C79952|PARP-16 poly (ADP-ribose) polymerase family, member 16 protein-coding common_peak1_274_2404_0.0975754266068325_11.2806088919608_1.54739019852615 chr8 106010117 106012047 + 1.54739019852615 NA promoter-TSS (NM_001301176) promoter-TSS (NM_001301176) -396 NM_025518 66369 Mm.287500 NM_025518 ENSMUSG00000031901 Dus2 2310016K04Rik|Dus2l dihydrouridine synthase 2 protein-coding common_peak1_282_2493_0.095896339613093_11.3321939196362_1.54672116939436 chr9 121718284 121720751 + 1.54672116939436 NA exon (NM_010918, exon 2 of 17) exon (NM_010918, exon 2 of 17) 336 NM_010918 18087 Mm.32842 NM_010918 ENSMUSG00000032525 Nktr 5330401F18Rik|D9Wsu172e natural killer tumor recognition sequence protein-coding common_peak2_57_450_-0.241707997556455_8.69612962447715_1.54655255915182 chr10 5805491 5806733 + 1.54655255915182 NA promoter-TSS (NM_025995) promoter-TSS (NM_025995) -647 NM_025995 67141 Mm.197520 NM_025995 ENSMUSG00000019773 Fbxo5 2510044I10Rik|C85305|Emi1|Fbxo31 F-box protein 5 protein-coding common_peak1_57_450_-0.241707997556455_8.69612962447715_1.54655255915182 chr15 76206712 76208003 + 1.54655255915182 NA intron (NM_011117, intron 1 of 31) intron (NM_011117, intron 1 of 31) 896 NM_201388 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_57_450_-0.241707997556455_8.69612962447715_1.54655255915182-2 chr6 70843288 70844173 + 1.54655255915182 NA promoter-TSS (NM_001313918) promoter-TSS (NM_001313918) -785 NM_010121 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak1_163_1493_-0.130296545351099_10.4798161601137_1.54628217383077 chr7 28168543 28170409 + 1.54628217383077 NA promoter-TSS (NM_007991) promoter-TSS (NM_007991) -272 NM_007991 14113 Mm.4595 NM_007991 ENSMUSG00000046865 Fbl AL022665|FIB|FLRN|RNU3IP1 fibrillarin protein-coding common_peak2_47_246_0.292020547693774_8.09437750543156_1.54585469058192-2 chr9 107281139 107282014 + 1.54585469058192 NA intron (NM_001316691, intron 1 of 7) intron (NM_001316691, intron 1 of 7) 7820 NM_001316691 102626 Mm.222612 NM_178907 ENSMUSG00000032577 Mapkapk3 3PK|AI874665|MAPKAP-K3|MAPKAP3|MK-3|MK3|MapkKapk3 mitogen-activated protein kinase-activated protein kinase 3 protein-coding common_peak2_47_246_0.292020547693774_8.09437750543156_1.54585469058192 chr19 6334367 6335773 + 1.54585469058192 NA promoter-TSS (NM_001168488) promoter-TSS (NM_001168488) 31 NM_008583 17283 Mm.12917 NM_008583 ENSMUSG00000024947 Men1 AW045611 multiple endocrine neoplasia 1 protein-coding common_peak1_354_3322_0.0829945550333058_11.7397678552087_1.54543646376807 chr11 118145890 118147397 + 1.54543646376807 NA Intergenic MLT1H|LTR|ERVL-MaLR -17424 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak2_354_3322_0.0829945550333058_11.7397678552087_1.54543646376807 chr1 165699041 165703859 + 1.54543646376807 NA intron (NM_178593, intron 1 of 6) L2b|LINE|L2 6644 NM_178593 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding unique_peak2_15_112_-0.52392569929002_6.55821611277018_1.54534477417358-2 chr2 164442396 164443278 + 1.54534477417358 NA intron (NM_011521, intron 1 of 4) intron (NM_011521, intron 1 of 4) 351 NM_011521 20971 Mm.3815 NM_011521 ENSMUSG00000017009 Sdc4 AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4 syndecan 4 protein-coding unique_peak2_15_112_-0.52392569929002_6.55821611277018_1.54534477417358 chr10 89463289 89464231 + 1.54534477417358 NA intron (NM_009108, intron 7 of 8) intron (NM_009108, intron 7 of 8) -19793 NM_001033331 237436 Mm.11982 NM_001033331 ENSMUSG00000074802 Gas2l3 8430435B07Rik|Gm240 growth arrest-specific 2 like 3 protein-coding common_peak2_15_112_-0.52392569929002_6.55821611277018_1.54534477417358 chr2 131239632 131240370 + 1.54534477417358 NA intron (NM_001206382, intron 3 of 7) intron (NM_001206382, intron 3 of 7) 5938 NM_144888 228607 Mm.287226 NM_144888 ENSMUSG00000037523 Mavs D430028G21Rik|IPS-1|Visa|cardif mitochondrial antiviral signaling protein protein-coding common_peak1_50_390_-0.263354020179897_8.4793477872174_1.54491728113288 chr7 27552697 27553736 + 1.54491728113288 NA promoter-TSS (NM_011116) promoter-TSS (NM_011116) -74 NM_175107 66367 Mm.29831 NM_175107 ENSMUSG00000049643 2310022A10Rik - RIKEN cDNA 2310022A10 gene protein-coding common_peak1_46_356_-0.276649176603081_8.34145567572756_1.54402760692447 chr9 104062697 104063504 + 1.54402760692447 NA promoter-TSS (NM_175324) promoter-TSS (NM_175324) 21 NM_025692 66663 Mm.224935 NM_025692 ENSMUSG00000032557 Uba5 5730525G14Rik|AW240750|Ube1dc1 ubiquitin-like modifier activating enzyme 5 protein-coding common_peak2_78_480_0.212206007343275_9.01599608744168_1.54370277582594 chr11 60912851 60914552 + 1.54370277582594 NA promoter-TSS (NM_025294) promoter-TSS (NM_025294) 91 NM_025294 24083 Mm.22780 NM_025294 ENSMUSG00000018931 Natd1 AI256713|F3-2|Gm16515|Gtlf3b N-acetyltransferase domain containing 1 protein-coding common_peak2_69_557_-0.216063286119297_9.01608966876954_1.54370277582575 chr5 62758792 62761034 + 1.54370277582575 NA intron (NM_178407, intron 1 of 32) intron (NM_178407, intron 1 of 32) 6264 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_29_217_-0.359527892179223_7.58842037868731_1.54357373474348 chr19 56320445 56320786 + 1.54357373474348 NA TTS (NM_146101) TTS (NM_146101) 32677 NM_146101 226243 Mm.25791 NM_146101 ENSMUSG00000025075 Habp2 AI035669|FSAP|HABP|HGFAL|PHBP hyaluronic acid binding protein 2 protein-coding unique_peak2_11_83_-0.605154265873021_6.08974028984225_1.54328506332033-2 chrX 73081846 73082647 + 1.54328506332033 NA intron (NM_001081642, intron 1 of 8) intron (NM_001081642, intron 1 of 8) 261 NM_001081642 434794 Mm.104764 NM_001081642 ENSMUSG00000079845 Xlr4a - X-linked lymphocyte-regulated 4A protein-coding common_peak1_11_83_-0.605154265873021_6.08974028984225_1.54328506332033 chr2 30942626 30943017 + 1.54328506332033 NA Intergenic Intergenic -10180 NM_133673 30934 Mm.249164 NM_133673 ENSMUSG00000026848 Tor1b 2610016F05Rik|DQ1|torsinB torsin family 1, member B protein-coding unique_peak2_11_83_-0.605154265873021_6.08974028984225_1.54328506332033 chr8 71488665 71489351 + 1.54328506332033 NA intron (NM_032544, intron 1 of 8) CpG 905 NM_032544 70359 Mm.142112 NM_032544 ENSMUSG00000007610 Gtpbp3 2410009F13Rik|AI607903 GTP binding protein 3 protein-coding common_peak1_199_1885_-0.115261834979643_10.8234830431853_1.54315617193882 chr17 35164247 35166181 + 1.54315617193882 NA promoter-TSS (NM_001199044) promoter-TSS (NM_001199044) -337 NM_020027 53761 Mm.272462 NM_020027 ENSMUSG00000024393 Prrc2a 3110039B05Rik|Bat-2|Bat2|D17H6S51E|G2|Wbp12|mKIAA4178 proline-rich coiled-coil 2A protein-coding common_peak1_93_604_0.188952066450419_9.33526736538717_1.54307434623536 chr17 47687467 47689036 + 1.54307434623536 NA TTS (NM_001290337) TTS (NM_001290337) 135 NM_025365 66119 Mm.89912 NM_025365 ENSMUSG00000033475 Tomm6 1110002E23Rik|AI663970 translocase of outer mitochondrial membrane 6 homolog (yeast) protein-coding common_peak2_97_820_-0.177749863680765_9.59236347993742_1.5428779808495 chr4 12139710 12141481 + 1.5428779808495 NA 5' UTR (NM_028226, exon 1 of 3) 5' UTR (NM_028226, exon 1 of 3) 478 NM_028226 72397 Mm.430709 NM_028226 ENSMUSG00000046667 Rbm12b1 3000004N20Rik|Rbm12b|Rbm12ba RNA binding motif protein 12 B1 protein-coding common_peak2_66_530_-0.222024350654429_8.94155587547694_1.5422850519423 chr9 63732034 63734538 + 1.5422850519423 NA intron (NM_016769, intron 1 of 8) PB1D10|SINE|Alu 24708 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_66_530_-0.222024350654429_8.94155587547694_1.5422850519423 chr19 5841465 5842545 + 1.5422850519423 NA TTS (NR_003513) TTS (NR_003513) 3473 NR_131212 66961 Mm.281895 NR_003513 ENSMUSG00000092274 Neat1 2310043N10Rik|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA common_peak2_60_477_-0.236347356933775_8.78269312951386_1.54205134244168 chr11 107463794 107466534 + 1.54205134244168 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 5556 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_119_1037_-0.157709673387465_9.94073589166415_1.54139965184921 chr15 99473971 99475097 + 1.54139965184921 NA exon (NM_029236, exon 1 of 2) exon (NM_029236, exon 1 of 2) 196 NM_029236 75284 Mm.32826 NM_029236 ENSMUSG00000037525 Bcdin3d 4930556P03Rik|AV138748 BCDIN3 domain containing protein-coding common_peak1_83_521_0.202793269601326_9.12930263137055_1.54071117894957 chrX 68678571 68679442 + 1.54071117894957 NA promoter-TSS (NR_033481) promoter-TSS (NR_033481) 465 NM_001290424 14265 Mm.3451 NM_008031 ENSMUSG00000000838 Fmr1 FMRP|Fmr-1 fragile X mental retardation syndrome 1 protein-coding common_peak1_53_415_-0.251619840115142_8.57462979808352_1.54065487539064 chr5 35574723 35575560 + 1.54065487539064 NA promoter-TSS (NM_030208) promoter-TSS (NM_030208) -71 NM_030208 78890 Mm.98522 NM_030208 ENSMUSG00000029097 Trmt44 2310079F23Rik|Mettl19 tRNA methyltransferase 44 protein-coding unique_peak2_54_296_0.266971897585149_8.34780506959334_1.54020941711932 chr7 122350844 122352624 + 1.54020941711932 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 62609 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak1_54_296_0.266971897585149_8.34780506959334_1.54020941711932 chr5 24842782 24843580 + 1.54020941711932 NA promoter-TSS (NM_053075) promoter-TSS (NM_053075) -820 NM_053075 19744 Mm.319175 NM_053075 ENSMUSG00000028945 Rheb Rheb1 Ras homolog enriched in brain protein-coding common_peak1_300_3059_-0.0900526580605945_11.5342896085497_1.54014619639746 chr17 3114031 3116099 + 1.54014619639746 NA promoter-TSS (NM_134123) promoter-TSS (NM_134123) 93 NM_134123 106583 Mm.124373 NM_134123 ENSMUSG00000046201 Scaf8 A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116 SR-related CTD-associated factor 8 protein-coding common_peak1_201_1624_0.117236501988632_10.7248422537975_1.54008530388435 chr13 41357372 41359661 + 1.54008530388435 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) 485 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_31_141_0.373118454806842_7.3363063469081_1.54006058648705-3 chr4 139211880 139212482 + 1.54006058648705 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 18070 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_31_141_0.373118454806842_7.3363063469081_1.54006058648705 chr1 106598715 106599398 + 1.54006058648705 NA intron (NM_009741, intron 1 of 1) AT_rich|Low_complexity|Low_complexity -52425 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_31_141_0.373118454806842_7.3363063469081_1.54006058648705-2 chr13 51765426 51766124 + 1.54006058648705 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 27972 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding unique_peak2_31_141_0.373118454806842_7.3363063469081_1.54006058648705 chr10 44400683 44401844 + 1.54006058648705 NA Intergenic MIRc|SINE|MIR 41587 NR_035450 100316688 NR_035450 ENSMUSG00000089260 Mir1929 mir-1929|mmu-mir-1929 microRNA 1929 ncRNA common_peak1_31_141_0.373118454806842_7.3363063469081_1.54006058648705-4 chr6 8646662 8647263 + 1.54006058648705 NA intron (NM_001252266, intron 10 of 11) intron (NM_001252266, intron 10 of 11) 111496 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak2_501_5139_0.066857147919114_12.3609812180408_1.53978709607632 chr15 78922049 78929237 + 1.53978709607632 NA Intergenic Intergenic -1082 NM_008495 16852 Mm.43831 NM_008495 ENSMUSG00000068220 Lgals1 AA410090|Gal-1|Galbp|L-14.5|L14|Lect14|galectin-1 lectin, galactose binding, soluble 1 protein-coding common_peak2_28_209_-0.365582203153554_7.53145441608935_1.5393680616546 chr19 4262328 4263650 + 1.5393680616546 NA TTS (NR_105951) TTS (NR_105951) 889 NR_105951 102465595 NR_105951 ENSMUSG00000099290 Mir6985 Gm27719|mmu-mir-6985 microRNA 6985 ncRNA common_peak1_28_209_-0.365582203153554_7.53145441608935_1.5393680616546 chr15 78565659 78566194 + 1.5393680616546 NA exon (NM_009008, exon 3 of 7) exon (NM_009008, exon 3 of 7) 6857 NM_009008 19354 Mm.1972 NM_009008 ENSMUSG00000033220 Rac2 AI323801|AI452260 RAS-related C3 botulinum substrate 2 protein-coding unique_peak2_8_63_-0.721926949313688_5.63903652534316_1.53884632328361-3 chr6 87551775 87552375 + 1.53884632328361 NA Intergenic Intergenic -18816 NM_001286610 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding unique_peak2_8_63_-0.721926949313688_5.63903652534316_1.53884632328361 chr13 36808171 36808770 + 1.53884632328361 NA Intergenic Intergenic -73993 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding unique_peak2_8_63_-0.721926949313688_5.63903652534316_1.53884632328361-2 chr14 52342778 52343260 + 1.53884632328361 NA Intergenic Intergenic 7025 NM_001012269 258008 Mm.377327 NM_001012269 ENSMUSG00000095030 Olfr1513 MOR223-10|MOR223-7P olfactory receptor 1513 protein-coding common_peak2_41_314_-0.295121063402425_8.15164748668607_1.53866190255029 chr7 126655316 126656650 + 1.53866190255029 NA intron (NM_029339, intron 1 of 9) ORR1B1|LTR|ERVL-MaLR 6674 NM_029339 75565 Mm.45686 NM_029339 ENSMUSG00000030714 Sgf29 1700023O11Rik|9530025I05Rik|Ccdc101 SAGA complex associated factor 29 protein-coding common_peak1_195_1841_-0.11695648680794_10.7885791026874_1.53824240926976 chr9 96888673 96890303 + 1.53824240926976 NA promoter-TSS (NM_153420) promoter-TSS (NM_153420) -14 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding common_peak2_139_1240_-0.142617063234111_10.2059788685133_1.53753886983593 chr11 53849514 53853434 + 1.53753886983593 NA intron (NR_033332, intron 1 of 3) B4|SINE|B4 7782 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA unique_peak2_16_119_-0.503354334634347_6.65521342829135_1.53729204765884 chr5 113670158 113671234 + 1.53729204765884 NA Intergenic L1_Mur3|LINE|L1 -20306 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding unique_peak2_16_119_-0.503354334634347_6.65521342829135_1.53729204765884-2 chr7 122158691 122159566 + 1.53729204765884 NA promoter-TSS (NM_011121) promoter-TSS (NM_011121) -307 NM_011121 18817 Mm.16525 NM_011121 ENSMUSG00000030867 Plk1 Plk|STPK13 polo-like kinase 1 protein-coding common_peak2_35_264_-0.318550876391539_7.89057311125479_1.53703764729494 chr6 38809551 38810997 + 1.53703764729494 NA intron (NM_010433, intron 2 of 14) intron (NM_010433, intron 2 of 14) 27037 NM_001136065 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding common_peak2_137_1220_-0.144639853554253_10.1815275582103_1.53670500057518 chr4 40874304 40877406 + 1.53670500057518 NA Intergenic B4A|SINE|B4 -21318 NM_022305 14595 Mm.15622 NM_022305 ENSMUSG00000028413 B4galt1 B-1,4-GalT|B-1,4-GalT1|GalT|Ggtb|Ggtb2|b4Gal-T1|beta-1,4-GalT|beta-1,4-GalT1|beta4Gal-T1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 protein-coding common_peak1_37_179_0.335123418253572_7.65941480545646_1.53620073113933 chr11 45944448 45944982 + 1.53620073113933 NA TTS (NM_001290737) TTS (NM_001290737) 220 NM_028185 72290 Mm.249827 NM_028185 ENSMUSG00000044847 Lsm11 2210404M20Rik|AV079530 U7 snRNP-specific Sm-like protein LSM11 protein-coding common_peak2_37_179_0.335123418253572_7.65941480545646_1.53620073113933 chr9 107340030 107341062 + 1.53620073113933 NA promoter-TSS (NM_175486) promoter-TSS (NM_175486) -94 NM_175486 235599 Mm.71039 NM_175486 ENSMUSG00000037977 6430571L13Rik - RIKEN cDNA 6430571L13 gene protein-coding common_peak2_27_201_-0.371646732733869_7.47238811638486_1.53603018046662-2 chr3 85574002 85574782 + 1.53603018046662 NA intron (NM_144896, intron 1 of 12) intron (NM_144896, intron 1 of 12) 263 NM_144896 229487 Mm.52275 NM_144896 ENSMUSG00000028085 Gatb 9430026F02Rik|Pet112|Pet112l glutamyl-tRNA(Gln) amidotransferase, subunit B protein-coding common_peak1_27_201_-0.371646732733869_7.47238811638486_1.53603018046662 chrX 153497667 153498136 + 1.53603018046662 NA promoter-TSS (NM_018798) promoter-TSS (NM_018798) -331 NM_018798 54609 Mm.430772 NM_018798 ENSMUSG00000050148 Ubqln2 Chap1|Dsk2|HRIHFB2157|Plic-2|Plic2 ubiquilin 2 protein-coding common_peak2_27_201_-0.371646732733869_7.47238811638486_1.53603018046662 chr19 10555426 10556353 + 1.53603018046662 NA promoter-TSS (NM_001277861) promoter-TSS (NM_001277861) -126 NM_001277860 68642 Mm.31236 NM_026798 ENSMUSG00000024667 Tmem216 1110017C22Rik|2810441K11Rik|4921533J23Rik|A930021F15Rik|AI482550 transmembrane protein 216 protein-coding common_peak1_45_347_-0.277870380568864_8.3040083055643_1.53588986469866 chr1 155416841 155417421 + 1.53588986469866 NA intron (NM_011273, intron 1 of 14) CpG 313 NM_011273 19775 Mm.266215 NM_011273 ENSMUSG00000026469 Xpr1 Rmc-1|Rmc1|Sxv|Syg1|XR xenotropic and polytropic retrovirus receptor 1 protein-coding common_peak1_211_1727_0.114078885652356_10.8119269449896_1.53584076807596 chr15 98917195 98919033 + 1.53584076807596 NA promoter-TSS (NM_029098) promoter-TSS (NM_029098) -16 NM_029098 74775 Mm.385020 NM_029098 ENSMUSG00000022999 Lmbr1l 1110013E13Rik|AA415653|D15Ertd735e|Limr limb region 1 like protein-coding common_peak1_211_1727_0.114078885652356_10.8119269449896_1.53584076807596-2 chr17 83350109 83352214 + 1.53584076807596 NA 5' UTR (NM_001114361, exon 1 of 24) 5' UTR (NM_001114361, exon 1 of 24) 230 NM_001114362 78798 Mm.295565 NM_199466 ENSMUSG00000032624 Eml4 4930443C24Rik|AI644019 echinoderm microtubule associated protein like 4 protein-coding common_peak1_207_1974_-0.112378759751827_10.8914475580759_1.53583797670584 chr2 165981574 165983940 + 1.53583797670584 NA Intergenic L1MEd|LINE|L1 -9880 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding unique_peak2_49_381_-0.264801324713007_8.44502816567924_1.53569100601641 chr1 85738862 85740720 + 1.53569100601641 NA Intergenic Intergenic -3185 NM_177055 319997 Mm.116691 NM_177055 ENSMUSG00000052760 A630001G21Rik - RIKEN cDNA A630001G21 gene protein-coding common_peak2_57_318_0.257863011934056_8.4463441197319_1.53569100601631 chr9 95119647 95121096 + 1.53569100601631 NA intron (NM_177909, intron 12 of 15) intron (NM_177909, intron 12 of 15) 286899 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak2_90_579_0.192435952705113_9.27612706636749_1.53562030690149 chr4 66827194 66829477 + 1.53562030690149 NA intron (NM_021297, intron 1 of 2) intron (NM_021297, intron 1 of 2) 784 NM_021297 21898 Mm.38049 NM_021297 ENSMUSG00000039005 Tlr4 Lps|Ly87|Ran/M1|Rasl2-8 toll-like receptor 4 protein-coding common_peak2_94_791_-0.180886829804399_9.53891320517741_1.53532789360102 chr15 79327045 79329060 + 1.53532789360102 NA 5' UTR (NM_001199024, exon 1 of 16) 5' UTR (NM_001199024, exon 1 of 16) 319 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak1_80_497_0.206340150924797_9.06317200753048_1.53451134201817 chr4 4792573 4793582 + 1.53451134201817 NA exon (NM_177730, exon 1 of 5) exon (NM_177730, exon 1 of 5) 229 NM_177730 242291 Mm.218889 NM_177730 ENSMUSG00000066324 Impad1 1110001C20Rik|AA408880|AI451589|AL022796|B230207P20|Jaws|gPAPP inositol monophosphatase domain containing 1 protein-coding common_peak2_80_497_0.206340150924797_9.06317200753048_1.53451134201817 chr16 97921773 97923020 + 1.53451134201817 NA 5' UTR (NM_174847, exon 1 of 14) 5' UTR (NM_174847, exon 1 of 14) 237 NM_174847 207781 Mm.1465 NM_174847 ENSMUSG00000045975 C2cd2 5730563M15|5830404H04Rik|AI314146|AI449533|BF168443|ORF25|mKIAA4045 C2 calcium-dependent domain containing 2 protein-coding common_peak1_71_575_-0.212015017196933_9.06391749284385_1.53451134201797 chr13 92483409 92484534 + 1.53451134201797 NA promoter-TSS (NM_001163627) promoter-TSS (NM_001163627) 60 NM_001163627 73942 Mm.85935 NM_001163627 ENSMUSG00000034334 Fam151b 4930405M20Rik family with sequence similarity 151, member B protein-coding common_peak2_114_986_-0.160339883484568_9.86673633271411_1.53424700563506 chr7 24398948 24400527 + 1.53424700563506 NA 5' UTR (NM_028047, exon 1 of 14) 5' UTR (NM_028047, exon 1 of 14) 109 NM_028047 71997 Mm.150977 NM_028047 ENSMUSG00000002210 Smg9 1500002O20Rik|AI429693|N28092 smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_119_831_0.161441336829323_9.78116038655575_1.53408313186193 chr19 5105465 5107634 + 1.53408313186193 NA intron (NM_029576, intron 1 of 5) intron (NM_029576, intron 1 of 5) 447 NM_029576 76308 Mm.182563 NM_029576 ENSMUSG00000024870 Rab1b 1110011F09Rik RAB1B, member RAS oncogene family protein-coding unique_peak1_14_47_0.597081620690192_5.88350331106625_1.53404806139876 chr2 31670688 31670988 + 1.53404806139876 NA exon (NM_144886, exon 1 of 9) exon (NM_144886, exon 1 of 9) 101 NM_144886 227715 Mm.150972 NM_144886 ENSMUSG00000039356 Exosc2 Rrp4 exosome component 2 protein-coding common_peak1_14_47_0.597081620690192_5.88350331106625_1.53404806139876 chr7 127707723 127708135 + 1.53404806139876 NA promoter-TSS (NR_030428) promoter-TSS (NR_030428) -558 NR_030428 791073 NR_030428 ENSMUSG00000076454 Mir762 Mirn762|mir-762|mmu-mir-762 microRNA 762 ncRNA common_peak1_14_47_0.597081620690192_5.88350331106625_1.53404806139876-2 chr9 63750413 63750849 + 1.53404806139876 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 7363 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_79_649_-0.199937057912328_9.24432737895965_1.5332053131902 chr7 44856809 44857870 + 1.5332053131902 NA promoter-TSS (NM_001290767) promoter-TSS (NM_001290767) -64 NM_001290767 59047 Mm.238254 NM_021549 ENSMUSG00000002963 Pnkp 1810009G08Rik|PNK polynucleotide kinase 3'- phosphatase protein-coding common_peak2_89_743_-0.186367862357043_9.44597487992951_1.53309062491164 chr1 74283671 74285939 + 1.53309062491164 NA promoter-TSS (NM_001039509) promoter-TSS (NM_001039509) -67 NM_001190444 227290 Mm.379371 NM_146110 ENSMUSG00000006299 Aamp AU040907|Aamp-rs angio-associated migratory protein protein-coding common_peak2_50_268_0.276208414570833_8.20956656984204_1.53276152310333 chr8 69037722 69039367 + 1.53276152310333 NA 3' UTR (NM_153054, exon 17 of 17) 3' UTR (NM_153054, exon 17 of 17) -50192 NM_007509 11966 Mm.249096 NM_007509 ENSMUSG00000006273 Atp6v1b2 AI194269|AI790362|Atp6b2|HO57|R74844 ATPase, H+ transporting, lysosomal V1 subunit B2 protein-coding common_peak2_30_135_0.379219363483967_7.27707252299232_1.53248220193755 chr11 33700099 33700818 + 1.53248220193755 NA intron (NM_001190885, intron 1 of 8) intron (NM_001190885, intron 1 of 8) -121501 NM_146017 216643 Mm.99989 NM_146017 ENSMUSG00000020159 Gabrp - gamma-aminobutyric acid (GABA) A receptor, pi protein-coding common_peak1_30_135_0.379219363483967_7.27707252299232_1.53248220193755 chr5 73283879 73284533 + 1.53248220193755 NA promoter-TSS (NR_040689) promoter-TSS (NR_040689) -22 NR_040688 72276 Mm.271215 NR_040687 ENSMUSG00000100175 1700025M24Rik - RIKEN cDNA 1700025M24 gene ncRNA common_peak1_17_126_-0.483999324899498_6.74668502432242_1.53223219564941-2 chr17 17599711 17600143 + 1.53223219564941 NA intron (NM_172827, intron 1 of 17) Lx9|LINE|L1 24562 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding unique_peak2_17_126_-0.483999324899498_6.74668502432242_1.53223219564941 chr1 170900935 170901822 + 1.53223219564941 NA Intergenic L3|LINE|CR1 11563 NM_001029984 435653 Mm.337931 NM_001029984 ENSMUSG00000070524 Fcrlb FREB-2|FREB2|FcRL2|Fcrlm2|Fcry|mFCRL2 Fc receptor-like B protein-coding unique_peak2_17_126_-0.483999324899498_6.74668502432242_1.53223219564941-2 chr4 31987063 31988158 + 1.53223219564941 NA intron (NM_009316, intron 7 of 16) intron (NM_009316, intron 7 of 16) 23503 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding unique_peak2_17_126_-0.483999324899498_6.74668502432242_1.53223219564941-3 chr9 118227094 118228091 + 1.53223219564941 NA Intergenic Intergenic -77396 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding common_peak1_17_126_-0.483999324899498_6.74668502432242_1.53223219564941 chr11 107420343 107420795 + 1.53223219564941 NA intron (NM_145823, intron 1 of 9) B2_Mm2|SINE|B2 50151 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_261_2262_0.0996787037663367_11.1938602211501_1.53221168216209 chr15 37005950 37008245 + 1.53221168216209 NA intron (NM_026521, intron 1 of 3) CpG 305 NM_026521 68036 Mm.371631 NM_026521 ENSMUSG00000062397 Zfp706 3110006P09Rik|AA793007|AW536850|C77232|Znf706 zinc finger protein 706 protein-coding common_peak2_96_810_-0.178219740853864_9.57444823379034_1.53172369492717 chr14 78908009 78911519 + 1.53172369492717 NA intron (NM_173758, intron 3 of 25) intron (NM_173758, intron 3 of 25) 60586 NM_173758 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding common_peak2_66_386_0.234353944005314_8.71336672814707_1.53170896531158 chr6 33248970 33249854 + 1.53170896531158 NA intron (NM_009148, intron 1 of 17) intron (NM_009148, intron 1 of 17) 262 NM_009148 20336 Mm.265512 NM_009148 ENSMUSG00000029763 Exoc4 C78892|Sec8|Sec8l1 exocyst complex component 4 protein-coding common_peak2_84_696_-0.193372998015931_9.34832834686046_1.53164537593662 chr9 110658658 110661956 + 1.53164537593662 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 3804 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_105_897_-0.168217558111678_9.72646285568531_1.5313626507071 chr5 32712705 32714518 + 1.5313626507071 NA Intergenic Intergenic 72015 NM_177298 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding common_peak2_164_1253_0.133103901737162_10.3588735836706_1.53131212192388 chr5 140320941 140322547 + 1.53131212192388 NA promoter-TSS (NM_010752) promoter-TSS (NM_010752) -192 NM_010752 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding common_peak1_62_494_-0.22967555501519_8.83644693745938_1.53121921822817 chr6 71980089 71981460 + 1.53121921822817 NA Intergenic Intergenic 61754 NR_046180 330350 Mm.246787 NR_046180 ENSMUSG00000108356 9130221F21Rik 9130221F21 RIKEN cDNA 9130221F21 gene ncRNA common_peak2_46_240_0.290241751196056_8.05801021182799_1.53099701888026 chr10 118476902 118478207 + 1.53099701888026 NA Intergenic Intergenic 36508 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak2_65_521_-0.223973737722648_8.91591912770856_1.53063660290056 chrX 135741901 135743475 + 1.53063660290056 NA promoter-TSS (NM_001005385) promoter-TSS (NM_001005385) -4 NM_001004359 67298 Mm.271980 NM_026081 ENSMUSG00000043384 Gprasp1 2210415K24Rik|3110031O14Rik|C87852|GASP|GASP1 G protein-coupled receptor associated sorting protein 1 protein-coding common_peak1_150_1354_-0.135556751255683_10.3362987606134_1.53041265993749 chr11 5761486 5762932 + 1.53041265993749 NA promoter-TSS (NR_015577) promoter-TSS (NR_015577) 59 NR_015577 76508 Mm.260203 NR_015577 ENSMUSG00000083844 Ube2d-ps 1600028I17Rik|2210015D19Rik|AI596465 ubiquitin-conjugating enzyme E2D, pseudogene ncRNA common_peak2_187_1752_-0.119254570960807_10.7159829952791_1.52994007390071 chr1 136414426 136416177 + 1.52994007390071 NA promoter-TSS (NM_026500) promoter-TSS (NM_026500) 30 NM_026500 67997 Mm.385462 NM_026500 ENSMUSG00000026404 Ddx59 1210002B07Rik|4833411G06Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 protein-coding common_peak1_18_133_-0.465724987060882_6.83322669692733_1.52965318678142 chr12 92882306 92882777 + 1.52965318678142 NA Intergenic RLTR3_Mm|LTR|ERVK 562282 NR_126436 75295 Mm.243878 NR_126436 4930559C10Rik - RIKEN cDNA 4930559C10 gene ncRNA common_peak1_18_133_-0.465724987060882_6.83322669692733_1.52965318678142-2 chr16 10783326 10783756 + 1.52965318678142 NA TTS (NM_009896) TTS (NM_009896) 1995 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding common_peak1_18_133_-0.465724987060882_6.83322669692733_1.52965318678142-3 chr3 93506036 93506492 + 1.52965318678142 NA Intergenic Intergenic -14232 NM_016740 20195 Mm.280038 NM_016740 ENSMUSG00000027907 S100a11 EMAPI|Emap1|S100a14|S100c|cal S100 calcium binding protein A11 protein-coding unique_peak2_18_133_-0.465724987060882_6.83322669692733_1.52965318678142-2 chr6 69516260 69516620 + 1.52965318678142 NA Intergenic 7SLRNA|srpRNA|srpRNA -189266 NR_004434 19783 NR_004434 ENSMUSG00000106222 Rprl1 Rmrp2|Rpr|Rprh2 ribonuclease P RNA-like 1 ncRNA common_peak2_18_133_-0.465724987060882_6.83322669692733_1.52965318678142-2 chr14 122912587 122913399 + 1.52965318678142 NA intron (NM_145466, intron 1 of 2) CpG 172 NM_145466 223267 Mm.379358 NM_145466 ENSMUSG00000041625 Ggact A2ld1 gamma-glutamylamine cyclotransferase protein-coding common_peak1_18_133_-0.465724987060882_6.83322669692733_1.52965318678142-4 chr6 130134776 130135241 + 1.52965318678142 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -5110 NM_001101620 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding unique_peak2_18_133_-0.465724987060882_6.83322669692733_1.52965318678142 chr15 77864118 77865189 + 1.52965318678142 NA Intergenic L1MB2|LINE|L1 -22478 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_18_133_-0.465724987060882_6.83322669692733_1.52965318678142 chr14 7817847 7818928 + 1.52965318678142 NA exon (NM_001081427, exon 1 of 46) exon (NM_001081427, exon 1 of 46) 430 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_77_473_0.210812511895959_8.99414950484624_1.52940673007277 chr15 67039054 67040353 + 1.52940673007277 NA Intergenic Intergenic -70062 NM_008681 17988 Mm.30837 NM_008681 ENSMUSG00000005125 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 protein-coding common_peak1_286_2890_-0.0923735191461539_11.451166133904_1.52938618137033 chr5 36370864 36375209 + 1.52938618137033 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 25103 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak1_19_140_-0.448417124768017_6.91534279001479_1.52915359720758 chr10 117896067 117896613 + 1.52915359720758 NA Intergenic Intergenic -29119 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA unique_peak2_19_140_-0.448417124768017_6.91534279001479_1.52915359720758 chr15 36786217 36787374 + 1.52915359720758 NA intron (NM_001253805, intron 2 of 5) PB1D9|SINE|Alu 4137 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak1_19_140_-0.448417124768017_6.91534279001479_1.52915359720758-4 chr2 131186920 131187278 + 1.52915359720758 NA 5' UTR (NM_001111075, exon 1 of 15) 5' UTR (NM_001111075, exon 1 of 15) 151 NM_001111075 12531 Mm.38444 NM_023117 ENSMUSG00000027330 Cdc25b AI604853 cell division cycle 25B protein-coding common_peak1_19_140_-0.448417124768017_6.91534279001479_1.52915359720758-5 chr9 124102934 124103397 + 1.52915359720758 NA intron (NM_009915, intron 1 of 2) intron (NM_009915, intron 1 of 2) 982 NM_009915 12772 Mm.6272 NM_009915 ENSMUSG00000049103 Ccr2 Cc-ckr-2|Ccr2a|Ccr2b|Ckr2|Ckr2a|Ckr2b|Cmkbr2|mJe-r chemokine (C-C motif) receptor 2 protein-coding common_peak1_19_140_-0.448417124768017_6.91534279001479_1.52915359720758-3 chr2 78994997 78995449 + 1.52915359720758 NA Intergenic Intergenic 126176 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_19_140_-0.448417124768017_6.91534279001479_1.52915359720758 chr19 47887186 47888211 + 1.52915359720758 NA Intergenic Intergenic 21904 NM_026619 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak1_19_140_-0.448417124768017_6.91534279001479_1.52915359720758-2 chr12 81532586 81532981 + 1.52915359720758 NA non-coding (NR_132142, exon 1 of 2) non-coding (NR_132142, exon 1 of 2) 128 NM_001309847 105940408 NM_001309847 ENSMUSG00000021139 Synj2bp-cox16 ARIP2a Synj2bp-cox16 readthrough protein-coding common_peak1_34_256_-0.324178834670345_7.84353513185871_1.52870402839473 chr11 79042242 79042817 + 1.52870402839473 NA intron (NM_013571, intron 4 of 17) intron (NM_013571, intron 4 of 17) 18932 NR_045873 790910 Mm.440410 NR_045873 Gm11201 ENSMUSG00000072637|OTTMUSG00000000169 predicted gene 11201 ncRNA common_peak2_34_256_-0.324178834670345_7.84353513185871_1.52870402839473 chr11 107027365 107028641 + 1.52870402839473 NA promoter-TSS (NM_001163473) promoter-TSS (NM_001163473) -220 NM_001163473 69066 Mm.40679 NM_001163473 ENSMUSG00000078607 1810010H24Rik OTTMUSG00000003581 RIKEN cDNA 1810010H24 gene protein-coding common_peak1_101_672_0.179820393703496_9.48437289146207_1.52840042098479 chr3 28805201 28805991 + 1.52840042098479 NA promoter-TSS (NM_026517) promoter-TSS (NM_026517) 85 NM_026517 68028 Mm.371630 NM_026517 ENSMUSG00000039221 Rpl22l1 3110001N18Rik|AU041196 ribosomal protein L22 like 1 protein-coding common_peak1_107_917_-0.1669181542015_9.75889126631306_1.5283594000644 chr13 113869389 113871277 + 1.5283594000644 NA intron (NM_172595, intron 1 of 4) intron (NM_172595, intron 1 of 4) 75825 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding common_peak1_53_289_0.268910788011016_8.31436448402044_1.52812477057856 chr8 119604488 119605246 + 1.52812477057856 NA intron (NM_021441, intron 1 of 14) intron (NM_021441, intron 1 of 14) 373 NM_021441 21341 Mm.41977 NM_021441 ENSMUSG00000031832 Taf1c Tafi95|mTAFI95 TATA-box binding protein associated factor, RNA polymerase I, C protein-coding common_peak2_53_289_0.268910788011016_8.31436448402044_1.52812477057856 chr4 6791780 6793195 + 1.52812477057856 NA intron (NM_145711, intron 3 of 8) intron (NM_145711, intron 3 of 8) 198236 NM_145711 252838 Mm.435828 NM_145711 ENSMUSG00000041272 Tox 1700007F02Rik thymocyte selection-associated high mobility group box protein-coding common_peak2_146_1313_-0.138738807258362_10.2903801566931_1.52806543876304 chr7 24883529 24885538 + 1.52806543876304 NA promoter-TSS (NM_023133) promoter-TSS (NM_023133) -181 NM_023133 20085 Mm.300281 NM_023133 ENSMUSG00000040952 Rps19 Dsk3 ribosomal protein S19 protein-coding common_peak1_44_338_-0.278962825571712_8.26566005035049_1.52800851901122 chr2 167623214 167623985 + 1.52800851901122 NA intron (NM_001311146, intron 1 of 2) RSINE1|SINE|B4 8406 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding unique_peak2_6_50_-0.83908521432628_5.25288273480836_1.52790159704429 chr1 37299453 37299793 + 1.52790159704429 NA promoter-TSS (NM_030266) promoter-TSS (NM_030266) -215 NM_030266 269180 Mm.5294 NM_030266 ENSMUSG00000026113 Inpp4a 107kDa|9630012D15|D130048C09Rik|R74740 inositol polyphosphate-4-phosphatase, type I protein-coding unique_peak2_6_50_-0.83908521432628_5.25288273480836_1.52790159704429-2 chr13 74406357 74406826 + 1.52790159704429 NA promoter-TSS (NR_035409).2 promoter-TSS (NR_035409).2 -474 NR_109835 735288 NR_109835 ENSMUSG00000094403 Mir692-2 Mir692-2a|Mir692-3|Mirn692-2|Mirn692-2a|mir-692-2|mmu-mir-692-2 microRNA 692-2 ncRNA common_peak2_412_4022_0.0750064916816644_12.0115592684665_1.52770997871603 chr7 24900856 24908532 + 1.52770997871603 NA intron (NM_001130152, intron 1 of 28) intron (NM_001130152, intron 1 of 28) 348 NM_001130152 16801 Mm.3181 NM_008488 ENSMUSG00000040940 Arhgef1 Lbcl2|Lsc Rho guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_81_667_-0.195648716222269_9.28587993436292_1.52770696241293 chr11 119913047 119914675 + 1.52770696241293 NA promoter-TSS (NM_001085498) promoter-TSS (NM_001085498) 51 NM_001085498 208092 Mm.306673 NM_001085498 ENSMUSG00000025371 Chmp6 2400004G01Rik charged multivesicular body protein 6 protein-coding common_peak1_81_667_-0.195648716222269_9.28587993436292_1.52770696241293 chr8 84989562 84990517 + 1.52770696241293 NA promoter-TSS (NM_133255) promoter-TSS (NM_133255) -556 NM_133255 170833 Mm.247775 NM_133255 ENSMUSG00000052566 Hook2 A630054I03Rik hook microtubule tethering protein 2 protein-coding common_peak2_144_1292_-0.139737658419365_10.2666377306006_1.52759653231529 chr17 7944780 7946668 + 1.52759653231529 NA 5' UTR (NM_025789, exon 1 of 8) 5' UTR (NM_025789, exon 1 of 8) 110 NM_025789 66832 Mm.29830 NM_025789 ENSMUSG00000073471 Rsph3a 1700012G05Rik|4930524H12Rik|R74860|Rshl2|Rshl2a radial spoke 3A homolog (Chlamydomonas) protein-coding common_peak2_299_2686_0.0915937246492149_11.4375774683378_1.52722570874789 chr10 67184375 67189796 + 1.52722570874789 NA intron (NM_001242396, intron 1 of 24) intron (NM_001242396, intron 1 of 24) 1335 NM_001242396 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding common_peak2_48_372_-0.266155583344553_8.40995402858296_1.52664224747073 chr4 59003059 59003944 + 1.52664224747073 NA exon (NM_001033165, exon 1 of 4) exon (NM_001033165, exon 1 of 4) 308 NM_001033165 72429 Mm.317801 NM_001033165 ENSMUSG00000070972 Dnajc25 2010109C08Rik|2010203O07Rik DnaJ heat shock protein family (Hsp40) member C25 protein-coding common_peak1_73_593_-0.207923158403_9.11035754159927_1.52629521152442 chr8 84269677 84270477 + 1.52629521152442 NA intron (NM_001294281, intron 1 of 8) RSINE1|SINE|B4 325 NM_001294281 67736 Mm.30095 NM_026350 ENSMUSG00000004994 Ccdc130 4930527D15Rik|C77430 coiled-coil domain containing 130 protein-coding common_peak1_183_1708_-0.120638944023561_10.6786172096644_1.52587968784299 chr1 136414746 136416014 + 1.52587968784299 NA non-coding (NR_024328, exon 1 of 3) non-coding (NR_024328, exon 1 of 3) 109 NM_026500 67997 Mm.385462 NM_026500 ENSMUSG00000026404 Ddx59 1210002B07Rik|4833411G06Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 protein-coding common_peak2_100_848_-0.172772549947581_9.64323446857925_1.52583044372007 chr3 137917930 137919360 + 1.52583044372007 NA promoter-TSS (NM_019920) promoter-TSS (NM_019920) 90 NM_019920 56692 Mm.331392 NM_019920 ENSMUSG00000091512 Lamtor3 AW556229|Map2k1ip1|Mapbp|Mapksp1|Mp1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding unique_peak2_29_129_0.386288619569249_7.21551212281308_1.52570265309952 chr2 150827803 150829023 + 1.52570265309952 NA intron (NM_153781, intron 17 of 19) intron (NM_153781, intron 17 of 19) 41617 NM_153781 110078 Mm.222584 NM_153781 ENSMUSG00000033059 Pygb - brain glycogen phosphorylase protein-coding common_peak1_29_129_0.386288619569249_7.21551212281308_1.52570265309952 chr2 166122919 166123519 + 1.52570265309952 NA intron (NM_001252579, intron 2 of 20) intron (NM_001252579, intron 2 of 20) 32066 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak1_25_186_-0.391473215246704_7.35115785226428_1.52490912560851 chr11 72606792 72607151 + 1.52490912560851 NA promoter-TSS (NM_025985) promoter-TSS (NM_025985) -290 NM_025985 67128 Mm.458052 NM_025985 ENSMUSG00000020794 Ube2g1 2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik ubiquitin-conjugating enzyme E2G 1 protein-coding unique_peak2_25_186_-0.391473215246704_7.35115785226428_1.52490912560851 chr11 33705890 33706936 + 1.52490912560851 NA intron (NM_001190885, intron 1 of 8) intron (NM_001190885, intron 1 of 8) -127456 NM_146017 216643 Mm.99989 NM_146017 ENSMUSG00000020159 Gabrp - gamma-aminobutyric acid (GABA) A receptor, pi protein-coding common_peak1_25_186_-0.391473215246704_7.35115785226428_1.52490912560851-2 chr6 134929141 134929638 + 1.52490912560851 NA intron (NR_037956, intron 1 of 1) intron (NR_037956, intron 1 of 1) 297 NR_037955 381822 Mm.5935 NR_037955 ENSMUSG00000098318 Lockd 1190002F15Rik|AI120476|Droc lncRNA downstream of Cdkn1b ncRNA common_peak2_25_186_-0.391473215246704_7.35115785226428_1.52490912560851-2 chr9 61627813 61628812 + 1.52490912560851 NA Intergenic Intergenic 255946 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak2_25_186_-0.391473215246704_7.35115785226428_1.52490912560851 chr16 32148551 32149336 + 1.52490912560851 NA intron (NM_146069, intron 2 of 3) IAPEz-int|LTR|ERVK 16533 NM_146069 224109 Mm.33498 NM_146069 ENSMUSG00000052384 Nrros E430025L02Rik|Lrcc33|Lrrc33 negative regulator of reactive oxygen species protein-coding common_peak1_24_178_-0.397800585127873_7.28491548470032_1.5245910884973-2 chr18 82526222 82526692 + 1.5245910884973 NA intron (NM_010777, intron 3 of 6) intron (NM_010777, intron 3 of 6) -28006 NM_001025256 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_24_178_-0.397800585127873_7.28491548470032_1.5245910884973-4 chr5 77092778 77093220 + 1.5245910884973 NA intron (NM_175606, intron 2 of 2) intron (NM_175606, intron 2 of 2) 2268 NM_001159901 74318 Mm.181852 NM_175606 ENSMUSG00000059325 Hopx 1110018K11Rik|1200015P04Rik|2300002F06Rik|AI848177|AW490897|Cameo|Hdop|Hod|Hop|Ob1|Obl|Toto HOP homeobox protein-coding common_peak1_24_178_-0.397800585127873_7.28491548470032_1.5245910884973 chr10 116949985 116950384 + 1.5245910884973 NA promoter-TSS (NR_038026) promoter-TSS (NR_038026) 196 NM_001003950 216363 Mm.336394 NM_001003950 ENSMUSG00000064181 Rab3ip B230311A06|Gtpat12|Rabin3 RAB3A interacting protein protein-coding common_peak1_24_178_-0.397800585127873_7.28491548470032_1.5245910884973-3 chr3 40950528 40951088 + 1.5245910884973 NA intron (NM_001040399, intron 1 of 9) CpG-9127 177 NM_001040399 214048 Mm.46782 NM_027663 ENSMUSG00000025762 Larp1b 1700108L22Rik|4933421B21Rik|AA690246|Larp2 La ribonucleoprotein domain family, member 1B protein-coding common_peak2_36_173_0.336840155362682_7.61136357353007_1.52451161623287 chr10 81302705 81304118 + 1.52451161623287 NA intron (NM_001293646, intron 1 of 18) intron (NM_001293646, intron 1 of 18) 10448 NM_001146687 18717 Mm.24222 NM_008844 ENSMUSG00000034902 Pip5k1c AI115456|AI835305|Pip5kIgamma phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma protein-coding common_peak1_36_173_0.336840155362682_7.61136357353007_1.52451161623287-3 chr8 46873240 46874045 + 1.52451161623287 NA Intergenic RSINE1|SINE|B4 -113283 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak1_36_173_0.336840155362682_7.61136357353007_1.52451161623287 chr3 9003901 9004555 + 1.52451161623287 NA intron (NM_009412, intron 1 of 5) CpG 287 NM_009412 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak1_36_173_0.336840155362682_7.61136357353007_1.52451161623287-2 chr4 129882643 129883399 + 1.52451161623287 NA Intergenic B4|SINE|B4 -23205 NR_045190 319894 Mm.59196 NR_045190 ENSMUSG00000086369 E330017L17Rik - RIKEN cDNA E330017L17 gene ncRNA common_peak1_247_2110_0.102808274946218_11.0951150008203_1.52415329625549 chr2 57122717 57124255 + 1.52415329625549 NA intron (NM_001139509, intron 1 of 7) CpG 517 NM_001139509 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak2_116_804_0.164232992759166_9.73496146938156_1.52414288045633 chr12 87471370 87472580 + 1.52414288045633 NA intron (NM_025507, intron 1 of 13) CpG 324 NM_025507 66354 Mm.271174 NM_025507 ENSMUSG00000021039 Snw1 2310008B08Rik|AW048543|NCoA-62|SKIP|Skiip SNW domain containing 1 protein-coding common_peak1_21_155_-0.425604476168298_7.0725999807781_1.52402096035669-3 chr5 121340776 121341332 + 1.52402096035669 NA intron (NM_181421, intron 55 of 75) intron (NM_181421, intron 55 of 75) 44561 NM_001163470 231712 Mm.20488 NM_172275 ENSMUSG00000042726 Trafd1 1110008K06Rik|Fln29 TRAF type zinc finger domain containing 1 protein-coding common_peak1_21_155_-0.425604476168298_7.0725999807781_1.52402096035669 chr1 54840028 54840518 + 1.52402096035669 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 86114 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding unique_peak2_21_155_-0.425604476168298_7.0725999807781_1.52402096035669-2 chr8 110919493 110920415 + 1.52402096035669 NA promoter-TSS (NM_009179) promoter-TSS (NM_009179) 89 NM_009179 20444 Mm.200388 NM_009179 ENSMUSG00000031749 St3gal2 AI429591|AW822065|ST3GalII|Siat5 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding common_peak1_21_155_-0.425604476168298_7.0725999807781_1.52402096035669-2 chr15 75641711 75642189 + 1.52402096035669 NA Intergenic Intergenic 25266 NM_011759 22701 Mm.87210 NM_011759 ENSMUSG00000047003 Zfp41 CTfin92|Zfp-41 zinc finger protein 41 protein-coding unique_peak2_21_155_-0.425604476168298_7.0725999807781_1.52402096035669 chr13 22050060 22051078 + 1.52402096035669 NA Intergenic Intergenic 7339 NM_178198 319183 Mm.371766 NM_178198 ENSMUSG00000069300 Hist1h2bj - histone cluster 1, H2bj protein-coding common_peak2_242_2056_0.10415052062123_11.0584013388355_1.52392907929846 chr6 136463479 136469838 + 1.52392907929846 NA Intergenic Intergenic -51089 NM_001201390 100502936 Mm.21182 NM_001201390 ENSMUSG00000045291 E330021D16Rik C85549 RIKEN cDNA E330021D16 gene protein-coding common_peak1_41_206_0.31059999748553_7.84878695624209_1.52337923896342 chr1 192770617 192771444 + 1.52337923896342 NA 5' UTR (NM_144881, exon 1 of 12) 5' UTR (NM_144881, exon 1 of 12) 189 NM_144881 226861 Mm.145857 NM_144881 ENSMUSG00000037375 Hhat 2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will hedgehog acyltransferase protein-coding common_peak1_71_425_0.223200364019542_8.84630980223561_1.5231972582568 chr13 101540644 101541757 + 1.5231972582568 NA Intergenic Intergenic -143620 NR_046187 78136 Mm.399065 NR_046187 4922502H24Rik - RIKEN cDNA 4922502H24 gene ncRNA common_peak2_56_311_0.259096500687924_8.41495046920621_1.5230487052546-4 chr4 34777572 34778631 + 1.5230487052546 NA intron (NM_025471, intron 1 of 3) intron (NM_025471, intron 1 of 3) 236 NM_025471 66291 Mm.28071 NM_025471 ENSMUSG00000028295 Smim8 1810030N24Rik|2810406B13Rik small integral membrane protein 8 protein-coding common_peak1_56_311_0.259096500687924_8.41495046920621_1.5230487052546-3 chr4 123717627 123718481 + 1.5230487052546 NA intron (NR_002445, intron 1 of 2) intron (NR_002445, intron 1 of 2) 107 NR_002445 170658 Mm.375824 NR_002445 BC002163 - NADH dehydrogenase Fe-S protein 5 pseudogene pseudo common_peak1_56_311_0.259096500687924_8.41495046920621_1.5230487052546-2 chr2 29722719 29723914 + 1.5230487052546 NA intron (NM_054050, intron 12 of 23) intron (NM_054050, intron 12 of 23) -38212 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak2_56_311_0.259096500687924_8.41495046920621_1.5230487052546 chr1 165722074 165723665 + 1.5230487052546 NA Intergenic Intergenic -14775 NM_001038846 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding common_peak2_56_311_0.259096500687924_8.41495046920621_1.5230487052546-3 chr3 86103402 86105451 + 1.5230487052546 NA intron (NM_001082414, intron 5 of 14) intron (NM_001082414, intron 5 of 14) 19992 NM_001082414 27059 Mm.2454 NM_012059 ENSMUSG00000028082 Sh3d19 AW011754|Kryn SH3 domain protein D19 protein-coding common_peak1_56_311_0.259096500687924_8.41495046920621_1.5230487052546 chr19 40822616 40823790 + 1.5230487052546 NA Intergenic Intergenic -8076 NM_172839 240665 Mm.309 NM_172839 ENSMUSG00000025010 Ccnj D430039C20Rik cyclin J protein-coding common_peak2_56_311_0.259096500687924_8.41495046920621_1.5230487052546-2 chr15 81189980 81190971 + 1.5230487052546 NA promoter-TSS (NR_015603) promoter-TSS (NR_015603) 282 NM_001082536 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak2_368_3490_0.0802876558192409_11.8095684694624_1.52288093561376 chr17 69415420 69418752 + 1.52288093561376 NA non-coding (NR_026848, exon 1 of 1) non-coding (NR_026848, exon 1 of 1) 639 NR_026848 77533 Mm.266592 NR_026848 C030034I22Rik - RIKEN cDNA C030034I22 gene ncRNA common_peak2_78_639_-0.199829003774045_9.22201359300034_1.52280602050959 chr15 12423532 12425340 + 1.52280602050959 NA intron (NM_001081064, intron 5 of 23) intron (NM_001081064, intron 5 of 23) 102940 NM_025673 66629 Mm.157655 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 protein-coding common_peak1_322_2950_0.0871082405593118_11.5705423257117_1.52255992966281 chr16 11133482 11135852 + 1.52255992966281 NA promoter-TSS (NM_029582) promoter-TSS (NM_029582) -135 NM_029582 106200 Mm.291015 NM_029582 ENSMUSG00000022498 Txndc11 2810408E11Rik|AI427833|EFP1|Txdc11 thioredoxin domain containing 11 protein-coding common_peak1_194_1553_0.119278248078469_10.6614099124469_1.5224596985921 chr11 109362778 109364080 + 1.5224596985921 NA non-coding (NR_038097, exon 1 of 2) non-coding (NR_038097, exon 1 of 2) 225 NR_038097 100036768 Mm.467767 NR_038097 ENSMUSG00000056687 Gm11696 OTTMUSG00000003456 predicted gene 11696 ncRNA common_peak2_102_868_-0.171664483037661_9.67738012529557_1.52198939875229 chr12 70110767 70112508 + 1.52198939875229 NA promoter-TSS (NR_104398) promoter-TSS (NR_104398) -8 NR_104398 18080 Mm.244047 NM_008697 ENSMUSG00000021068 Nin 3110068G20Rik|AI385615|AU024711|mKIAA1565 ninein protein-coding common_peak1_49_261_0.279204501785291_8.1730252524301_1.52150565726451 chr9 48835610 48836591 + 1.52150565726451 NA promoter-TSS (NM_001033324) promoter-TSS (NM_001033324) -155 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding common_peak2_115_996_-0.159561757512915_9.88166881564174_1.52117714805651 chr10 42067458 42069634 + 1.52117714805651 NA Intergenic ORR1E|LTR|ERVL-MaLR -50164 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak2_83_686_-0.193467022646889_9.32743277749466_1.5209455977401 chr6 83100935 83102673 + 1.5209455977401 NA exon (NM_001081266, exon 1 of 9) exon (NM_001081266, exon 1 of 9) 288 NM_001081266 243510 Mm.436553 NM_001081266 ENSMUSG00000079511 Ccdc142 A230058J24Rik coiled-coil domain containing 142 protein-coding common_peak2_45_233_0.29470839569646_8.01771891743164_1.52092301255678 chr11 51763112 51764231 + 1.52092301255678 NA promoter-TSS (NM_025535) promoter-TSS (NM_025535) 8 NM_025535 66397 Mm.196592 NM_025535 ENSMUSG00000020386 Sar1b 2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb secretion associated Ras related GTPase 1B protein-coding common_peak2_213_1749_0.112443523822439_10.8293609686309_1.52091085637999 chr15 5515568 5519926 + 1.52091085637999 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 21429 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_20_148_-0.441693876663663_6.99832158213033_1.5208139843162-2 chr2 167537220 167537639 + 1.5208139843162 NA promoter-TSS (NM_011427) promoter-TSS (NM_011427) -798 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak1_20_148_-0.441693876663663_6.99832158213033_1.5208139843162 chr1 36719101 36719585 + 1.5208139843162 NA intron (NR_040290, intron 2 of 8) intron (NR_040290, intron 2 of 8) 4805 NR_040290 71166 Mm.157049 NR_040290 ENSMUSG00000102416 4933424G06Rik 1700104I15Rik RIKEN cDNA 4933424G06 gene ncRNA common_peak2_33_248_-0.329853359907553_7.7950752521143_1.52078559286911 chr3 144703582 144704833 + 1.52078559286911 NA intron (NM_001282037, intron 5 of 10) intron (NM_001282037, intron 5 of 10) 16128 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_58_459_-0.23996364590255_8.7255082279931_1.5200866992055 chr15 89314754 89315268 + 1.5200866992055 NA intron (NM_001081030, intron 1 of 39) CpG 300 NM_001081030 77980 Mm.35483 NM_030019 ENSMUSG00000036529 Sbf1 2610510A08Rik|B230113C15Rik|Mtmr5|mKIAA3020 SET binding factor 1 protein-coding common_peak2_151_1365_-0.135540631334132_10.347971452623_1.52003860118372 chr9 57129932 57131892 + 1.52003860118372 NA non-coding (NR_102289, exon 1 of 2) non-coding (NR_102289, exon 1 of 2) 135 NM_028636 73744 Mm.30110 NM_028636 ENSMUSG00000032295 Man2c1 1110025H24Rik mannosidase, alpha, class 2C, member 1 protein-coding common_peak1_67_539_-0.220054713703949_8.96678824019886_1.51996724027434 chr2 146511403 146512220 + 1.51996724027434 NA exon (NM_001033348, exon 1 of 41) exon (NM_001033348, exon 1 of 41) 193 NM_001033348 241694 Mm.222310 NM_001033348 ENSMUSG00000037110 Ralgapa2 A230067G21Rik|AS250|BC053994|RGC2|pp250 Ral GTPase activating protein, alpha subunit 2 (catalytic) protein-coding common_peak1_28_123_0.394467004125693_7.15142981244972_1.51983150554744 chr12 36041001 36041474 + 1.51983150554744 NA intron (NM_025359, intron 1 of 5) intron (NM_025359, intron 1 of 5) 1241 NM_025359 66109 Mm.254663 NM_025359 ENSMUSG00000020577 Tspan13 1100001I23Rik|NET-6|Tm4sf13 tetraspanin 13 protein-coding common_peak1_28_123_0.394467004125693_7.15142981244972_1.51983150554744-3 chr2 174438503 174439281 + 1.51983150554744 NA exon (NM_022325, exon 1 of 6) exon (NM_022325, exon 1 of 6) 147 NM_022325 64138 Mm.156919 NM_022325 ENSMUSG00000016256 Ctsz AI787083|AU019819|CTSX|D2Wsu143e cathepsin Z protein-coding common_peak1_28_123_0.394467004125693_7.15142981244972_1.51983150554744-2 chr18 68059414 68059824 + 1.51983150554744 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 126362 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak2_28_123_0.394467004125693_7.15142981244972_1.51983150554744 chrX 139610097 139611112 + 1.51983150554744 NA promoter-TSS (NM_023270) promoter-TSS (NM_023270) -16 NM_023270 66889 Mm.27764 NM_023270 ENSMUSG00000031438 Rnf128 1300002C13Rik|AI987883|GRAIL|Greul1 ring finger protein 128 protein-coding common_peak2_35_166_0.347593380584971_7.55750098276654_1.51961314972203 chr18 82528420 82529769 + 1.51961314972203 NA intron (NM_010777, intron 3 of 6) intron (NM_010777, intron 3 of 6) -25369 NM_001025256 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_35_166_0.347593380584971_7.55750098276654_1.51961314972203 chr11 104582895 104583379 + 1.51961314972203 NA intron (NM_010858, intron 4 of 8) ID_B1|SINE|B4 -20939 NR_130177 100415912 Mm.446786 NR_130177 Gm11665 Gm11664|OTTMUSG00000003182|OTTMUSG00000003183 predicted gene 11665 ncRNA common_peak2_306_2766_0.0900843432901812_11.479149100255_1.51951263816246 chr2 24973941 24977321 + 1.51951263816246 NA promoter-TSS (NM_001031808) promoter-TSS (NM_001031808) -402 NM_146251 241274 Mm.389243 NM_146251 ENSMUSG00000036833 Pnpla7 BC027342|E430013P11Rik|Nre patatin-like phospholipase domain containing 7 protein-coding common_peak1_147_1322_-0.136589072694553_10.3013028099314_1.51931174678117 chr12 16588169 16589898 + 1.51931174678117 NA intron (NM_001130412, intron 1 of 20) intron (NM_001130412, intron 1 of 20) 737 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak2_130_931_0.152901117192593_9.94063670325058_1.51871510295604 chr4 141147240 141148987 + 1.51871510295604 NA 5' UTR (NM_172518, exon 1 of 10) 5' UTR (NM_172518, exon 1 of 10) 191 NM_172518 213499 Mm.28865 NM_172518 ENSMUSG00000028920 Fbxo42 6720460I06Rik|mKIAA1332 F-box protein 42 protein-coding common_peak1_119_1036_-0.15631912384281_9.94004061689182_1.51871510295565 chr10 4611624 4613044 + 1.51871510295565 NA intron (NM_007956, intron 1 of 8) intron (NM_007956, intron 1 of 8) 345 NM_007956 13982 Mm.9213 NM_007956 ENSMUSG00000019768 Esr1 ER|ER-alpha|ERa|ERalpha|ESR|Estr|Estra|Nr3a1 estrogen receptor 1 (alpha) protein-coding common_peak1_98_647_0.18160446092954_9.4306522333494_1.51863234405381 chr12 4816902 4818305 + 1.51863234405381 NA promoter-TSS (NM_025323) promoter-TSS (NM_025323) -5 NM_025323 66055 Mm.102627 NM_025323 ENSMUSG00000037361 Sf3b6 0610009D07Rik|6030419K15Rik|AV001342|Sf3b14 splicing factor 3B, subunit 6 protein-coding common_peak1_126_895_0.154855772116441_9.88478280811582_1.51859636665116 chr1 127774162 127775163 + 1.51859636665116 NA promoter-TSS (NR_045298) promoter-TSS (NR_045298) 498 NM_028399 72949 Mm.268672 NM_028399 ENSMUSG00000026349 Ccnt2 2900041I18Rik|C81304|CycT2|CycT2a|CycT2b cyclin T2 protein-coding common_peak1_106_906_-0.165988321172749_9.74196457994215_1.51842782036072 chr18 14782701 14783856 + 1.51842782036072 NA promoter-TSS (NM_001100449) promoter-TSS (NM_001100449) 33 NM_001100449 72504 Mm.312233 NM_001100449 ENSMUSG00000054321 Taf4b 105kDa|2610524B04Rik|4932409F03Rik|AW987595|TAFII-105|TAFII105|Taf2c2 TATA-box binding protein associated factor 4b protein-coding common_peak1_62_356_0.241828895922684_8.60069471199044_1.51829374843334 chr14 8097883 8098944 + 1.51829374843334 NA exon (NM_178279, exon 1 of 19) exon (NM_178279, exon 1 of 19) 200 NM_178279 218699 Mm.29515 NM_145458 ENSMUSG00000033885 Pxk C230080L11Rik|D14Ertd813e|MONaKA PX domain containing serine/threonine kinase protein-coding common_peak1_340_3159_0.084354774797692_11.6678862304633_1.5182501141962 chr3 95014156 95017029 + 1.5182501141962 NA promoter-TSS (NM_030074) promoter-TSS (NM_030074) -354 NM_030074 78266 Mm.389478 NM_030074 ENSMUSG00000019338 Zfp687 4931408L03Rik|Znf687|mKIAA1441 zinc finger protein 687 protein-coding unique_peak2_12_90_-0.57898570674412_6.21830178682664_1.51798608485256-2 chr15 37786978 37787762 + 1.51798608485256 NA intron (NM_134094, intron 1 of 6) ORR1E|LTR|ERVL-MaLR 4630 NM_001170866 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak2_12_90_-0.57898570674412_6.21830178682664_1.51798608485256 chr11 62662626 62663401 + 1.51798608485256 NA intron (NM_175002, intron 1 of 1) MER20|DNA|hAT-Charlie 14349 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding unique_peak2_12_90_-0.57898570674412_6.21830178682664_1.51798608485256-5 chr2 181219298 181219968 + 1.51798608485256 NA promoter-TSS (NM_199312) promoter-TSS (NM_199312) -383 NM_199312 332713 Mm.23349 NM_199312 ENSMUSG00000047841 BC051628 1700026M20Rik|Fndc11 cDNA sequence BC051628 protein-coding unique_peak2_12_90_-0.57898570674412_6.21830178682664_1.51798608485256-3 chr18 38407386 38407973 + 1.51798608485256 NA Intergenic Intergenic -11296 NM_022996 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding unique_peak2_12_90_-0.57898570674412_6.21830178682664_1.51798608485256-6 chr5 113715259 113716250 + 1.51798608485256 NA intron (NR_033216, intron 2 of 2) intron (NR_033216, intron 2 of 2) 9018 NR_033216 381707 Mm.159016 NR_033216 ENSMUSG00000042184 1700069L16Rik 1700096P12Rik RIKEN cDNA 1700069L16 gene ncRNA unique_peak2_12_90_-0.57898570674412_6.21830178682664_1.51798608485256-4 chr18 89214280 89214849 + 1.51798608485256 NA intron (NM_178687, intron 3 of 6) Lx6|LINE|L1 17137 NM_001039149 225825 Mm.139293 NM_178687 ENSMUSG00000034028 Cd226 BC051526|DNAM-1|DNAM1|Pta1|TLiSA1 CD226 antigen protein-coding common_peak1_91_588_0.189561602635763_9.29690462514834_1.51795690909071 chr5 108065523 108066593 + 1.51795690909071 NA intron (NM_001253880, intron 1 of 12) intron (NM_001253880, intron 1 of 12) 384 NR_045608 17765 Mm.257149 NM_013827 ENSMUSG00000029267 Mtf2 9230112N11Rik|AA537621|C76717|M96|Pcl2 metal response element binding transcription factor 2 protein-coding common_peak1_47_363_-0.267406860920245_8.37409120973857_1.51778464681522 chr14 100284496 100285554 + 1.51778464681522 NA Intergenic Intergenic -135229 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding common_peak2_47_363_-0.267406860920245_8.37409120973857_1.51778464681522 chr16 11012278 11014221 + 1.51778464681522 NA intron (NR_040518, intron 2 of 2) intron (NR_040518, intron 2 of 2) 4351 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA common_peak2_244_2394_-0.100828116834538_11.1753958822063_1.51776005791962 chr17 29549400 29554209 + 1.51776005791962 NA intron (NM_198647, intron 1 of 12) RSINE1|SINE|B4 2002 NM_198647 381085 Mm.328934 NM_198647 ENSMUSG00000042203 Tbc1d22b BC045600 TBC1 domain family, member 22B protein-coding common_peak2_59_334_0.247251458438924_8.5116430145646_1.51765808734561 chr16 13060716 13062306 + 1.51765808734561 NA Intergenic RLTR1B-int|LTR|ERV1 -48225 NM_015769 50505 Mm.287837 NM_015769 ENSMUSG00000022545 Ercc4 AI606920|Xpf excision repair cross-complementing rodent repair deficiency, complementation group 4 protein-coding common_peak1_190_1513_0.120222016001062_10.6242604979863_1.51731778520433 chr5 30959084 30961694 + 1.51731778520433 NA promoter-TSS (NM_016703) promoter-TSS (NM_016703) -62 NM_001294302 50907 Mm.272414 NM_016703 ENSMUSG00000045302 Preb C85705 prolactin regulatory element binding protein-coding common_peak2_141_1260_-0.140580703294846_10.2300622086808_1.51694855181069 chr7 28981024 28983617 + 1.51694855181069 NA promoter-TSS (NM_028659) promoter-TSS (NM_028659) -432 NM_001285942 73830 Mm.29714 NM_028659 ENSMUSG00000053565 Eif3k 1200009C21Rik|Eif3s12 eukaryotic translation initiation factor 3, subunit K protein-coding common_peak1_181_1422_0.124237407379921_10.5368386502164_1.51686651921105 chr1 79760567 79763223 + 1.51686651921105 NA promoter-TSS (NM_027057) promoter-TSS (NM_027057) -126 NM_027057 69368 Mm.293273 NM_027057 ENSMUSG00000073643 Wdfy1 1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435 WD repeat and FYVE domain containing 1 protein-coding common_peak1_86_546_0.197400807873295_9.1940974267292_1.51657771564386 chr16 31274352 31275248 + 1.51657771564386 NA intron (NM_025800, intron 1 of 5) CpG 477 NM_025800 66849 Mm.291593 NM_025800 ENSMUSG00000047714 Ppp1r2 0610025N14Rik|2310007G06Rik|4930440J04Rik|5430408E15Rik|D16Ertd248e|IPP-2 protein phosphatase 1, regulatory (inhibitor) subunit 2 protein-coding common_peak2_38_288_-0.301982232892818_8.02393456605427_1.51623227371321 chr11 94676646 94677663 + 1.51623227371321 NA intron (NM_145828, intron 1 of 10) CpG 339 NM_145828 217119 Mm.100638 NM_145828 ENSMUSG00000020868 Xylt2 E030002B02Rik|XT-II|XT2|xylT-II xylosyltransferase II protein-coding common_peak1_40_199_0.317587075290701_7.80264972742008_1.51531741432896 chr11 78826571 78827053 + 1.51531741432896 NA intron (NM_001076681, intron 1 of 3) CpG 217 NM_001076681 66274 Mm.258932 NM_001076681 ENSMUSG00000072640 Lyrm9 1810012P15Rik LYR motif containing 9 protein-coding common_peak1_40_199_0.317587075290701_7.80264972742008_1.51531741432896-3 chr8 27128155 27128776 + 1.51531741432896 NA exon (NM_025686, exon 1 of 4) exon (NM_025686, exon 1 of 4) 167 NM_025686 66653 Mm.334467 NM_025686 ENSMUSG00000031487 Brf2 2700059M06Rik|5730512K07Rik|AU018504|AU022602|BRFU|TFIIIB50 BRF2, RNA polymerase III transcription initiation factor 50kDa subunit protein-coding common_peak1_40_199_0.317587075290701_7.80264972742008_1.51531741432896-2 chr17 72947959 72948940 + 1.51531741432896 NA Intergenic Intergenic 30144 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_54_423_-0.246629436177283_8.60460573647456_1.51516506669041 chr8 35678713 35679956 + 1.51516506669041 NA 3' UTR (NM_001081279, exon 3 of 3) 3' UTR (NM_001081279, exon 3 of 3) -90314 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA unique_peak2_27_117_0.403921700656084_7.08460389968988_1.51499933740136-2 chr7 19855436 19856464 + 1.51499933740136 NA intron (NM_001270489, intron 2 of 3) intron (NM_001270489, intron 2 of 3) 3947 NM_001270489 100502736 Mm.445354 NM_001270489 ENSMUSG00000092216 Gm19345 - predicted gene, 19345 protein-coding unique_peak2_27_117_0.403921700656084_7.08460389968988_1.51499933740136 chr2 69713001 69713677 + 1.51499933740136 NA promoter-TSS (NM_177244) promoter-TSS (NM_177244) -733 NM_177244 320720 Mm.289566 NM_177244 ENSMUSG00000027086 Fastkd1 5330408N05Rik|mKIAA1800 FAST kinase domains 1 protein-coding common_peak2_364_3443_0.0805551858671052_11.7901470203304_1.51491551653432 chr9 41151965 41158166 + 1.51491551653432 NA intron (NM_176860, intron 1 of 13) RSINE1|SINE|B4 2429 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak1_189_1773_-0.117708192839496_10.7339361978813_1.51478671728657 chr14 45656756 45658966 + 1.51478671728657 NA TTS (NR_039593) TTS (NR_039593) 192 NR_039593 100628600 NR_039593 ENSMUSG00000093167 Mir5131 mmu-mir-5131|mu-mir-5131 microRNA 5131 ncRNA common_peak2_73_441_0.218493403006335_8.8971492608946_1.51391711117646 chr17 24072628 24073882 + 1.51391711117646 NA TTS (NM_001080773) TTS (NM_001080773) 230 NM_027008 69259 Mm.28171 NM_027008 ENSMUSG00000016946 Kctd5 2610030N08Rik|mKIAA0176 potassium channel tetramerisation domain containing 5 protein-coding common_peak1_93_605_0.186569415139424_9.33645869104266_1.51339855360447 chr15 80697253 80698798 + 1.51339855360447 NA promoter-TSS (NR_045309) promoter-TSS (NR_045309) -415 NR_045310 106059 Mm.442457 NR_045309 A430088P11Rik - RIKEN cDNA A430088P11 gene ncRNA common_peak1_32_240_-0.335569388569082_7.74510464194542_1.51332584266616 chr5 117976778 117977438 + 1.51332584266616 NA intron (NM_145564, intron 1 of 11) CpG 338 NM_145564 231670 Mm.21912 NM_145564 ENSMUSG00000032898 Fbxo21 2810425J22Rik|AU016673 F-box protein 21 protein-coding common_peak1_92_771_-0.18164031638049_9.50163687907784_1.51316542902223 chr5 21259847 21261636 + 1.51316542902223 NA intron (NM_175437, intron 19 of 30) B3|SINE|B2 74474 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_69_556_-0.213475491630142_9.01479577152496_1.51277695950858 chr3 41742669 41743303 + 1.51277695950858 NA promoter-TSS (NM_001081411) promoter-TSS (NM_001081411) 368 NM_027271 73852 Mm.29006 NM_027271 ENSMUSG00000025766 D3Ertd751e 2810009O15Rik|4930415G15Rik DNA segment, Chr 3, ERATO Doi 751, expressed protein-coding common_peak1_101_857_-0.170550749185733_9.65955846290668_1.51219739289401 chr10 19167276 19168715 + 1.51219739289401 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 757 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_26_111_0.414852644781991_7.0147812444486_1.51136303463421 chr2 173037401 173038012 + 1.51136303463421 NA Intergenic Intergenic 15804 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak1_26_111_0.414852644781991_7.0147812444486_1.51136303463421-3 chr8 13757152 13757599 + 1.51136303463421 NA promoter-TSS (NM_027276) promoter-TSS (NM_027276) -315 NM_027276 69957 Mm.182412 NM_027276 ENSMUSG00000038416 Cdc16 2700071J12Rik|2810431D22Rik|APC6 CDC16 cell division cycle 16 protein-coding common_peak1_26_111_0.414852644781991_7.0147812444486_1.51136303463421-2 chr7 140207028 140207685 + 1.51136303463421 NA Intergenic Intergenic -4588 NM_001011814 258055 Mm.377339 NM_001011814 ENSMUSG00000050366 Olfr524 MOR103-14P olfactory receptor 524 protein-coding common_peak2_26_111_0.414852644781991_7.0147812444486_1.51136303463421 chr19 57610277 57611165 + 1.51136303463421 NA promoter-TSS (NM_181415) promoter-TSS (NM_181415) -313 NM_181415 226255 Mm.245340 NM_181415 ENSMUSG00000054843 Atrnl1 AI504415|AW555641|Alp|Atrnl|Atrnlp attractin like 1 protein-coding common_peak2_44_226_0.299630150273717_7.97636356242777_1.51111181669664 chr5 92465638 92467545 + 1.51111181669664 NA intron (NM_007644, intron 2 of 11) B2_Mm1t|SINE|B2 8034 NR_105843 102466159 NR_105843 ENSMUSG00000099160 Mir6415 Gm27714|mmu-mir-6415 microRNA 6415 ncRNA common_peak2_88_563_0.193467016365394_9.23628486058149_1.51065038239215 chr14 62836608 62838448 + 1.51065038239215 NA promoter-TSS (NM_175546) promoter-TSS (NM_175546) -162 NM_175546 268752 Mm.1960 NM_175546 ENSMUSG00000014547 Wdfy2 5830485M08|B130024L21Rik|ProF|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding common_peak1_185_1729_-0.119127290450141_10.696992677299_1.51038521394709 chr6 48674789 48676920 + 1.51038521394709 NA promoter-TSS (NM_174960) promoter-TSS (NM_174960) -281 NM_174960 317758 Mm.116971 NM_174960 ENSMUSG00000051124 Gimap9 A630002K24|BB145400 GTPase, IMAP family member 9 protein-coding common_peak2_77_630_-0.201940434188332_9.20052597788838_1.51038193524417 chr2 26667452 26670002 + 1.51038193524417 NA intron (NM_010695, intron 4 of 6) intron (NM_010695, intron 4 of 6) 2555 NM_010695 16821 Mm.123925 NM_010695 ENSMUSG00000026919 Lcn4 A630045M08Rik|Vnsp2 lipocalin 4 protein-coding common_peak2_278_2451_0.0952079733500923_11.3073472503658_1.51008044656177 chr3 51415089 51417558 + 1.51008044656177 NA exon (NM_053089, exon 1 of 20) exon (NM_053089, exon 1 of 20) 307 NM_053089 74838 Mm.275281 NM_053089 ENSMUSG00000063273 Naa15 5730450D16Rik|6330400I15|ASTBDN|Narg1|Tbdn-1|mNAT1 N(alpha)-acetyltransferase 15, NatA auxiliary subunit protein-coding common_peak2_253_2498_-0.098312180726305_11.2379790957236_1.50995259848392 chr15 73159700 73164606 + 1.50995259848392 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 22794 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_95_622_0.183911737440805_9.3750442217444_1.50940746458073 chr9 75440765 75442071 + 1.50940746458073 NA promoter-TSS (NM_001039522) promoter-TSS (NM_001039522) -106 NM_001039522 235497 Mm.41508 NM_001006122 ENSMUSG00000042487 Leo1 Gm185 Leo1, Paf1/RNA polymerase II complex component protein-coding common_peak2_297_2665_0.0910762482050043_11.4259991891915_1.50925066149674 chr17 72836469 72838220 + 1.50925066149674 NA intron (NM_027166, intron 1 of 2) CpG 640 NM_027166 383295 Mm.277533 NM_027166 ENSMUSG00000039770 Ypel5 2310076K21Rik|CGI-127 yippee-like 5 (Drosophila) protein-coding common_peak2_70_418_0.222353112147665_8.82198298977318_1.50914459280378 chr6 134640572 134641956 + 1.50914459280378 NA intron (NM_026371, intron 1 of 3) CpG 324 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding common_peak1_34_160_0.350528836408917_7.50618129631908_1.50882162778141 chr2 127508343 127509004 + 1.50882162778141 NA intron (NM_019789, intron 2 of 8) intron (NM_019789, intron 2 of 8) 12719 NM_001291005 56461 Mm.315292 NM_019789 ENSMUSG00000079056 Kcnip3 4933407H12Rik|AI413860|Csen|DREAM|KChIP3|R74849 Kv channel interacting protein 3, calsenilin protein-coding common_peak1_243_2382_-0.100819162770588_11.168153654805_1.50869482268821 chr5 140998495 141000812 + 1.50869482268821 NA intron (NM_175362, intron 1 of 24) intron (NM_175362, intron 1 of 24) 943 NM_175362 108723 Mm.46187 NM_175362 ENSMUSG00000036526 Card11 0610008L17Rik|2410011D02Rik|BIMP3|CARMA1 caspase recruitment domain family, member 11 protein-coding common_peak1_143_1053_0.142863143794521_10.1130907235345_1.50833269155154 chr2 104589541 104591413 + 1.50833269155154 NA promoter-TSS (NM_145529) promoter-TSS (NM_145529) -7 NM_177253 228410 Mm.259876 NM_145529 ENSMUSG00000027176 Cstf3 4732468G05Rik|C79532|CstF-77 cleavage stimulation factor, 3' pre-RNA, subunit 3 protein-coding common_peak2_183_1707_-0.119794521967911_10.6781949986365_1.50829661958681 chr1 173877838 173880987 + 1.50829661958681 NA intron (NM_001170853, intron 2 of 9) intron (NM_001170853, intron 2 of 9) 775 NM_001170853 100040462 Mm.463437 NM_001170853 ENSMUSG00000090272 Mndal Gm2785|Ifi212 myeloid nuclear differentiation antigen like protein-coding common_peak1_16_57_0.5455552658466_6.13075862805087_1.50781993660217-2 chr5 142425023 142425468 + 1.50781993660217 NA intron (NM_199068, intron 1 of 8) intron (NM_199068, intron 1 of 8) 23748 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf forkhead box K1 protein-coding common_peak1_16_57_0.5455552658466_6.13075862805087_1.50781993660217-3 chr8 3493231 3493674 + 1.50781993660217 NA intron (NM_080461, intron 1 of 1) CpG 314 NM_080461 140482 Mm.299073 NM_080461 ENSMUSG00000047264 Zfp358 Zfend zinc finger protein 358 protein-coding common_peak1_16_57_0.5455552658466_6.13075862805087_1.50781993660217-4 chr8 128619611 128620129 + 1.50781993660217 NA Intergenic B4|SINE|B4 -65784 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_16_57_0.5455552658466_6.13075862805087_1.50781993660217 chr16 52088107 52088495 + 1.50781993660217 NA intron (NM_001033238, intron 3 of 17) B3|SINE|B2 56752 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak2_75_457_0.21438503767266_8.94639630693327_1.50569858528222 chr5 138441248 138442534 + 1.50569858528222 NA intron (NM_028130, intron 1 of 4) intron (NM_028130, intron 1 of 4) 415 NM_028130 72154 Mm.20263 NM_028130 ENSMUSG00000036898 Zfp157 2610020C11Rik|A630094N24Rik|AI327407|mszf12|mszf23-1 zinc finger protein 157 protein-coding common_peak2_46_355_-0.272602343540381_8.33943225919621_1.50540540751214 chr2 112261835 112262886 + 1.50540540751214 NA exon (NM_025403, exon 2 of 2) exon (NM_025403, exon 2 of 2) 434 NM_025403 66181 Mm.272346 NM_025403 ENSMUSG00000027133 Nop10 1110036B12Rik|NOP10P|Nola3 NOP10 ribonucleoprotein protein-coding common_peak2_126_1106_-0.150228812607507_10.0373251004778_1.50536405133592 chr10 127324767 127327066 + 1.50536405133592 NA intron (NM_146011, intron 4 of 14) intron (NM_146011, intron 4 of 14) 2189 NM_146011 216445 Mm.227198 NM_146011 ENSMUSG00000040345 Arhgap9 AU043488 Rho GTPase activating protein 9 protein-coding common_peak2_79_648_-0.19771581799565_9.24321675900131_1.50466288700698 chr6 17693471 17695310 + 1.50466288700698 NA intron (NM_001289625, intron 1 of 15) CpG 396 NM_001289625 64213 Mm.12051 NM_022332 ENSMUSG00000029534 St7 9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding unique_peak2_58_327_0.247974400423741_8.48153920482995_1.50461413317405 chr6 148293742 148295593 + 1.50461413317405 NA exon (NM_198967, exon 10 of 20) exon (NM_198967, exon 10 of 20) -59989 NR_003634 66184 Mm.391542 NM_025405 ENSMUSG00000063171 Rps4l 1110033J19Rik|AA407494|Rps4y2 ribosomal protein S4-like pseudo common_peak2_107_916_-0.165345734382747_9.75810505640368_1.50437125480798 chr18 62155672 62157747 + 1.50437125480798 NA Intergenic MIR3|SINE|MIR 23272 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak1_64_372_0.233882700077659_8.65997317029407_1.50434173626232 chr6 134640934 134641718 + 1.50434173626232 NA intron (NM_026371, intron 1 of 3) intron (NM_026371, intron 1 of 3) 386 NM_026371 67774 Mm.41892 NM_026371 ENSMUSG00000042992 Borcs5 5830457J20Rik|AW124643|Loh12cr1 BLOC-1 related complex subunit 5 protein-coding common_peak2_85_538_0.198198018687799_9.17324047209641_1.50419069493749 chr10 94514313 94515885 + 1.50419069493749 NA exon (NM_172051, exon 1 of 4) exon (NM_172051, exon 1 of 4) 242 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 AW488095|C630016B22Rik|C88213|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak1_71_574_-0.209508161586358_9.06266406503856_1.50418352777369 chr17 21383238 21384373 + 1.50418352777369 NA promoter-TSS (NM_172486) promoter-TSS (NM_172486) 57 NM_172486 210503 Mm.33443 NM_172486 ENSMUSG00000062743 Zfp677 A830058L05Rik|Tce8 zinc finger protein 677 protein-coding common_peak2_84_695_-0.191301647996237_9.34729267185061_1.50409514889555 chr16 17921103 17922848 + 1.50409514889555 NA Intergenic CpG 6244 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding common_peak2_349_3266_0.0824128731501474_11.7149571760131_1.50394869649064 chr19 7017025 7020726 + 1.50394869649064 NA intron (NM_153795, intron 1 of 14) intron (NM_153795, intron 1 of 14) 594 NM_153795 108101 Mm.157591 NM_153795 ENSMUSG00000024965 Fermt3 C79673|Kindlin3 fermitin family member 3 protein-coding common_peak2_178_1393_0.124529739554346_10.5072797156456_1.50373449908343 chr1 93444273 93446473 + 1.50373449908343 NA intron (NM_133808, intron 1 of 27) CpG 328 NM_001301364 110611 Mm.30012 NM_133808 ENSMUSG00000034088 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein protein-coding common_peak1_98_828_-0.173773827681586_9.60834137765496_1.5033436592409 chr12 25155780 25156889 + 1.5033436592409 NA Intergenic Intergenic 27160 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_154_1158_0.136122940606155_10.2467263213095_1.50293879597888 chr3 103801521 103803261 + 1.50293879597888 NA promoter-TSS (NR_040412) promoter-TSS (NR_040412) -738 NR_040412 100503157 Mm.445554 NR_040412 ENSMUSG00000084997 Gm15471 OTTMUSG00000022448 predicted gene 15471 ncRNA common_peak2_167_1284_0.129758933276326_10.3924321107194_1.50293647968595 chr11 119298755 119300657 + 1.50293647968595 NA intron (NM_138669, intron 1 of 11) CpG 337 NM_138669 192170 Mm.197555 NM_138669 ENSMUSG00000025580 Eif4a3 2400003O03Rik|Ddx48|eIF4A-III|mKIAA0111 eukaryotic translation initiation factor 4A3 protein-coding common_peak2_110_752_0.167412112692768_9.64021211101831_1.50241990783467 chr7 143822111 143823664 + 1.50241990783467 NA promoter-TSS (NM_030221) promoter-TSS (NM_030221) -35 NM_030221 78914 Mm.35104 NM_030221 ENSMUSG00000031090 Nadsyn1 9130012B15Rik NAD synthetase 1 protein-coding common_peak1_39_193_0.317833696630005_7.75882969050213_1.50213053999323 chr10 75763610 75764305 + 1.50213053999323 NA intron (NM_172549, intron 1 of 36) intron (NM_172549, intron 1 of 36) 400 NM_172549 104248 Mm.257404 NM_172549 ENSMUSG00000020196 Cabin1 A330070M20Rik|Cain|Ppp3in calcineurin binding protein 1 protein-coding common_peak1_91_761_-0.181961761027098_9.48266630697977_1.50209823733028 chr2 30827209 30828372 + 1.50209823733028 NA intron (NM_133346, intron 1 of 5) CpG 510 NM_133346 72323 Mm.27656 NM_133346 ENSMUSG00000039483 Asb6 2510004M11Rik|AA409356 ankyrin repeat and SOCS box-containing 6 protein-coding unique_peak1_17_62_0.52740543837275_6.24098264268629_1.50188186727174 chr13 20141955 20142418 + 1.50188186727174 NA intron (NM_080288, intron 1 of 21) B2_Mm2|SINE|B2 51679 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding common_peak1_17_62_0.52740543837275_6.24098264268629_1.50188186727174-3 chr3 69441195 69441607 + 1.50188186727174 NA intron (NM_178726, intron 1 of 3) intron (NM_178726, intron 1 of 3) 124483 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding common_peak1_17_62_0.52740543837275_6.24098264268629_1.50188186727174-2 chr10 61199923 61200286 + 1.50188186727174 NA intron (NM_001081127, intron 21 of 21) intron (NM_001081127, intron 21 of 21) 24842 NM_023064 65971 Mm.30227 NM_023064 ENSMUSG00000020096 Tbata 1700021K02Rik|AI428928|Spatial|Titest thymus, brain and testes associated protein-coding common_peak1_17_62_0.52740543837275_6.24098264268629_1.50188186727174 chr1 165841647 165841994 + 1.50188186727174 NA intron (NR_103716, intron 1 of 8) DNA1_Mam|DNA|TcMar 53139 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_17_62_0.52740543837275_6.24098264268629_1.50188186727174-4 chr7 75796761 75797245 + 1.50188186727174 NA Intergenic Intergenic -51335 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_112_769_0.166804862590137_9.67211706687733_1.50180204903012 chr13 45849904 45851570 + 1.50180204903012 NA intron (NM_009124, intron 3 of 7) intron (NM_009124, intron 3 of 7) 114254 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_92_597_0.186815046689485_9.31740919754285_1.50079216606829 chr15 82015179 82017104 + 1.50079216606829 NA promoter-TSS (NM_010247) promoter-TSS (NM_010247) -1 NM_134095 28075 Mm.474453 NM_134095 ENSMUSG00000022472 Desi1 AI427858|AI850401|D15Wsu75e|DeSI-1|Fam152b|Pppde2 desumoylating isopeptidase 1 protein-coding common_peak1_175_1619_-0.122143421518969_10.6007063870125_1.50076243243237 chr2 32966351 32967596 + 1.50076243243237 NA Intergenic CpG 3672 NR_002898 104367 Mm.250030 NR_002898 ENSMUSG00000065124 Snora65 MBII-351|Rnu65 small nucleolar RNA, H/ACA box 65 snoRNA common_peak1_307_2779_0.0890769955349082_11.4854076653783_1.50068094601714 chr8 11556073 11558046 + 1.50068094601714 NA intron (NM_001302451, intron 2 of 2) CpG 602 NM_011919 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding common_peak1_30_224_-0.347098986482731_7.64023169797567_1.4999890891195 chr12 3236789 3237453 + 1.4999890891195 NA intron (NR_015551, intron 1 of 6) intron (NR_015551, intron 1 of 6) 1330 NR_015551 74173 Mm.309774 NM_028796 ENSMUSG00000079179 Rab10os 1700012B15Rik|1810036A22Rik RAB10, member RAS oncogene family, opposite strand ncRNA common_peak1_19_72_0.501309668750759_6.4404793932554_1.49979460444319 chr8 121591194 121591665 + 1.49979460444319 NA intron (NM_026160, intron 1 of 3) intron (NM_026160, intron 1 of 3) 961 NM_026160 67443 Mm.28357 NM_026160 ENSMUSG00000031812 Map1lc3b 1010001C15Rik|Atg8|LC3b|Map1lc3 microtubule-associated protein 1 light chain 3 beta protein-coding common_peak1_19_72_0.501309668750759_6.4404793932554_1.49979460444319-2 chr9 96119333 96119721 + 1.49979460444319 NA promoter-TSS (NM_177352) promoter-TSS (NM_177352) 98 NM_177352 235533 Mm.213651 NM_177352 ENSMUSG00000041440 Gk5 AV095337|C330018K18Rik|G630067D24Rik glycerol kinase 5 (putative) protein-coding common_peak1_72_434_0.217447435649538_8.87359530856086_1.49974766545746 chr18 42275333 42276186 + 1.49974766545746 NA promoter-TSS (NR_033452) promoter-TSS (NR_033452) 406 NM_172626 225432 Mm.329400 NM_172626 ENSMUSG00000024491 Rbm27 A730010I06|AI043120|Psc1|mKIAA1311 RNA binding motif protein 27 protein-coding common_peak2_72_434_0.217447435649538_8.87359530856086_1.49974766545746 chr3 109360093 109361874 + 1.49974766545746 NA intron (NM_020505, intron 1 of 26) intron (NM_020505, intron 1 of 26) 20300 NM_020505 57257 Mm.282257 NM_020505 ENSMUSG00000033721 Vav3 A530094I06Rik|AA986410|Idd18.1 vav 3 oncogene protein-coding common_peak1_113_975_-0.159626306826356_9.85092418414971_1.4996356735956 chr14 54553536 54554677 + 1.4996356735956 NA intron (NM_145462, intron 1 of 9) CpG 255 NM_145462 219072 Mm.202152 NM_145462 ENSMUSG00000022177 Haus4 9430093H08Rik|AU016300|D14Ertd500e HAUS augmin-like complex, subunit 4 protein-coding common_peak1_163_1245_0.131579534414136_10.3488781202311_1.49950618757468 chr8 84041551 84043471 + 1.49950618757468 NA promoter-TSS (NM_016671) promoter-TSS (NM_016671) 64 NM_016671 50931 Mm.38386 NM_016671 ENSMUSG00000005465 Il27ra CRL1|IL-27R|Tccr|WSX-1|Wsx1|zcytor1 interleukin 27 receptor, alpha protein-coding unique_peak2_18_67_0.512901362146551_6.34391352232361_1.49942820951552-2 chrX 12140170 12140788 + 1.49942820951552 NA intron (NR_045434, intron 1 of 3) CpG 19867 NR_045434 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_18_67_0.512901362146551_6.34391352232361_1.49942820951552 chr12 4132958 4133356 + 1.49942820951552 NA promoter-TSS (NM_001159537) promoter-TSS (NM_001159537) -240 NM_001159536 104111 Mm.489807 NM_138305 ENSMUSG00000020654 Adcy3 AC3|mKIAA0511 adenylate cyclase 3 protein-coding unique_peak2_18_67_0.512901362146551_6.34391352232361_1.49942820951552 chr4 43964339 43964924 + 1.49942820951552 NA intron (NM_027450, intron 1 of 4) intron (NM_027450, intron 1 of 4) 6929 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding unique_peak1_18_67_0.512901362146551_6.34391352232361_1.49942820951552 chr7 88259588 88260122 + 1.49942820951552 NA Intergenic RSINE1|SINE|B4 -18230 NM_009982 13032 Mm.89295 NM_009982 ENSMUSG00000030560 Ctsc AI047818|CatC|DPP1|DPPI cathepsin C protein-coding common_peak1_18_67_0.512901362146551_6.34391352232361_1.49942820951552-2 chr5 148495490 148495782 + 1.49942820951552 NA Intergenic Intergenic 57152 NM_011908 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG ubiquitin-like 3 protein-coding unique_peak2_13_97_-0.554757405283638_6.33733114147339_1.4994282095155-2 chr17 25727623 25728227 + 1.4994282095155 NA promoter-TSS (NM_145409) promoter-TSS (NM_145409) 174 NM_028009 106707 Mm.24603 NM_028009 ENSMUSG00000041199 Rpusd1 2310051D06Rik|AU019540|Rlucl RNA pseudouridylate synthase domain containing 1 protein-coding unique_peak2_13_97_-0.554757405283638_6.33733114147339_1.4994282095155-3 chr2 31133402 31134266 + 1.4994282095155 NA intron (NM_001177648, intron 1 of 16) intron (NM_001177648, intron 1 of 16) 8174 NM_001177649 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding unique_peak2_13_97_-0.554757405283638_6.33733114147339_1.4994282095155 chr10 80989701 80990280 + 1.4994282095155 NA intron (NM_010319, intron 2 of 3) intron (NM_010319, intron 2 of 3) 11375 NM_001038655 14708 Mm.222496 NM_010319 ENSMUSG00000048240 Gng7 AI840417 guanine nucleotide binding protein (G protein), gamma 7 protein-coding common_peak1_13_97_-0.554757405283638_6.33733114147339_1.4994282095155 chr17 33560528 33560933 + 1.4994282095155 NA intron (NM_053214, intron 1 of 27) B3A|SINE|B2 5023 NM_053214 17916 Mm.42019 NM_053214 ENSMUSG00000024300 Myo1f C330006B10Rik myosin IF protein-coding common_peak2_227_2198_-0.104908546932082_11.0501776153889_1.49930997062047 chr4 144895945 144899810 + 1.49930997062047 NA intron (NM_011303, intron 1 of 5) intron (NM_011303, intron 1 of 5) 4740 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak2_65_520_-0.221207303431271_8.91453591056287_1.49883689454236 chr7 80765248 80767315 + 1.49883689454236 NA intron (NM_016721, intron 4 of 37) intron (NM_016721, intron 4 of 37) 37050 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_23_94_0.443919859761147_6.79181553821152_1.49882543596675-2 chr5 36712755 36713317 + 1.49882543596675 NA Intergenic Intergenic -17015 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak1_23_94_0.443919859761147_6.79181553821152_1.49882543596675 chr15 62038569 62039048 + 1.49882543596675 NA promoter-TSS (NR_132746) promoter-TSS (NR_132746) -449 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 plasmacytoma variant translocation 1 ncRNA common_peak1_23_94_0.443919859761147_6.79181553821152_1.49882543596675-3 chr8 71205377 71206028 + 1.49882543596675 NA intron (NR_131056, intron 1 of 4) intron (NR_131056, intron 1 of 4) 1246 NR_131056 330796 Mm.258257 NR_131056 Gm38415 E230016D10 predicted gene, 38415 ncRNA common_peak2_306_3128_-0.0872946713407856_11.5678386075705_1.49864976835662 chr17 83729090 83733545 + 1.49864976835662 NA intron (NM_001171052, intron 3 of 15) intron (NM_001171052, intron 3 of 15) 25154 NM_001171052 116871 Mm.277668 NM_054082 ENSMUSG00000055817 Mta3 1110002J22Rik|mKIAA1266 metastasis associated 3 protein-coding common_peak2_255_2521_-0.0976500524576274_11.2515275340994_1.49854802543511 chr7 25218324 25222142 + 1.49854802543511 NA promoter-TSS (NM_207677) promoter-TSS (NM_207677) -374 NM_207677 67379 Mm.280594 NM_026117 ENSMUSG00000054499 Dedd2 2410050E11Rik|FLAME-3 death effector domain-containing DNA binding protein 2 protein-coding common_peak1_33_154_0.35402416688629_7.45313648871738_1.49846960568169-2 chrX 159696451 159696966 + 1.49846960568169 NA intron (NM_001135727, intron 2 of 17) intron (NM_001135727, intron 2 of 17) -11893 NM_021389 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_33_154_0.35402416688629_7.45313648871738_1.49846960568169 chr6 41550607 41551127 + 1.49846960568169 NA Intergenic Intergenic 29091 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak2_24_100_0.427803709384589_6.87211333744409_1.49816780976792-2 chr5 100636745 100637470 + 1.49816780976792 NA Intergenic Intergenic 37149 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding unique_peak2_24_100_0.427803709384589_6.87211333744409_1.49816780976792 chr16 30172644 30173536 + 1.49816780976792 NA Intergenic Intergenic 94442 NM_027904 71756 Mm.290614 NM_027904 ENSMUSG00000023176 Cpn2 1300018K11Rik carboxypeptidase N, polypeptide 2 protein-coding common_peak1_24_100_0.427803709384589_6.87211333744409_1.49816780976792 chr14 60726799 60727442 + 1.49816780976792 NA intron (NM_001033272, intron 4 of 12) PB1D10|SINE|Alu -5784 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak2_24_100_0.427803709384589_6.87211333744409_1.49816780976792-4 chr9 40743506 40744278 + 1.49816780976792 NA intron (NM_133733, intron 1 of 6) intron (NM_133733, intron 1 of 6) -57381 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding common_peak2_24_100_0.427803709384589_6.87211333744409_1.49816780976792-3 chr7 98341409 98342078 + 1.49816780976792 NA Intergenic Intergenic 19545 NM_001168540 244152 Mm.25317 NM_001024619 ENSMUSG00000049580 Tsku 9530051K01Rik|E2ig4|Lrrc54|Tsk tsukushi, small leucine rich proteoglycan protein-coding common_peak1_24_100_0.427803709384589_6.87211333744409_1.49816780976792-2 chr16 96273641 96274086 + 1.49816780976792 NA intron (NM_001122993, intron 2 of 3) intron (NM_001122993, intron 2 of 3) -7169 NM_033149 93961 Mm.154783 NM_033149 ENSMUSG00000074892 B3galt5 1190002B21Rik|AU045265|b3Galt-V UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 protein-coding common_peak2_24_100_0.427803709384589_6.87211333744409_1.49816780976792 chr4 84020463 84021179 + 1.49816780976792 NA Intergenic Intergenic 24058 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak1_24_100_0.427803709384589_6.87211333744409_1.49816780976792-3 chr6 29985281 29985837 + 1.49816780976792 NA intron (NR_040264, intron 1 of 1) intron (NR_040264, intron 1 of 1) 230 NR_040263 76419 Mm.84522 NR_040263 ENSMUSG00000045709 Smkr-ps 1700023L04Rik smal lysine rich protein 1, pseudogene ncRNA common_peak1_54_297_0.262122497923754_8.35022976942404_1.49801835510179 chr4 116507588 116508210 + 1.49801835510179 NA intron (NM_008389, intron 1 of 8) CpG 350 NM_008389 16351 Mm.1350 NM_008389 ENSMUSG00000028696 Ipp D4Jhu8|Mipp IAP promoted placental gene protein-coding common_peak2_41_313_-0.290533793906773_8.14935385193824_1.49765013899398 chr4 135439177 135440249 + 1.49765013899398 NA Intergenic B1_Mus1|SINE|Alu -5908 NM_022980 53902 Mm.331970 NM_022980 ENSMUSG00000059713 Rcan3 AU041093|Csp3|Dscr1l2 regulator of calcineurin 3 protein-coding common_peak1_41_313_-0.290533793906773_8.14935385193824_1.49765013899398 chr2 27676310 27677119 + 1.49765013899398 NA promoter-TSS (NM_011305) promoter-TSS (NM_011305) -487 NM_011305 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding unique_peak2_41_313_-0.290533793906773_8.14935385193824_1.49765013899398 chr3 105824303 105826489 + 1.49765013899398 NA Intergenic Intergenic 9829 NR_045845 433637 Mm.331285 NR_045845 ENSMUSG00000104835 Gm5547 EG433637 predicted gene 5547 ncRNA common_peak1_59_467_-0.235095975799345_8.75281673168373_1.49748919764597 chr1 155158642 155159473 + 1.49748919764597 NA intron (NM_021433, intron 1 of 7) CpG 354 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak2_118_823_0.160571843056426_9.76678644871143_1.49746406426287 chr7 43422660 43425102 + 1.49746406426287 NA Intergenic B4|SINE|B4 -6220 NM_177693 233187 Mm.267027 NM_177693 ENSMUSG00000004613 Lim2 19kDa|4833403J20|MP19|To3 lens intrinsic membrane protein 2 protein-coding common_peak1_45_346_-0.273718737298395_8.30193248392906_1.49690335493494 chr8 3357396 3358178 + 1.49690335493494 NA intron (NM_001033378, intron 1 of 10) C-rich|Low_complexity|Low_complexity 4372 NM_001033378 319493 Mm.234565 NM_001033378 ENSMUSG00000074497 A430078G23Rik - RIKEN cDNA A430078G23 gene protein-coding common_peak1_36_272_-0.312973489708442_7.93627039606563_1.49668897898896 chr11 120491776 120492356 + 1.49668897898896 NA exon (NM_013770, exon 1 of 11) exon (NM_013770, exon 1 of 11) 229 NM_013770 27376 Mm.3991 NM_013770 ENSMUSG00000025792 Slc25a10 Dic solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10 protein-coding common_peak1_73_592_-0.205492332148237_9.10914212847188_1.49652831620777 chr10 80929939 80930808 + 1.49652831620777 NA intron (NM_008655, intron 1 of 3) CpG 282 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak1_214_1761_0.110834548211857_10.8384154830263_1.49635033240754 chr6 120462998 120464685 + 1.49635033240754 NA intron (NM_008359, intron 1 of 12) intron (NM_008359, intron 1 of 12) 644 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak2_138_1006_0.146136812785818_10.0489163743997_1.49626683178879 chr5 96911029 96914250 + 1.49626683178879 NA Intergenic Intergenic -8633 NR_131152 666266 Mm.32442 NR_131152 ENSMUSG00000106357 Gm8013 EG666266 predicted gene 8013 ncRNA common_peak1_139_1238_-0.140290135244356_10.2048154045184_1.4962637773966 chr6 42264432 42266085 + 1.4962637773966 NA TTS (NM_175408) TTS (NM_175408) 273 NM_007610 12366 Mm.3921 NM_007610 ENSMUSG00000029863 Casp2 CASP-2|ICH-1|NEDD-2|Nedd2 caspase 2 protein-coding common_peak2_208_1983_-0.110450693862132_10.8989709634558_1.49616664751276 chr19 8941104 8943350 + 1.49616664751276 NA TTS (NM_144872) TTS (NM_144872) 307 NM_011842 23942 Mm.25339 NM_011842 ENSMUSG00000071646 Mta2 AW550797|Mata1l1|Mta1l1|mmta2 metastasis-associated gene family, member 2 protein-coding common_peak2_77_474_0.207772057575907_8.99566973200626_1.49609332899401-2 chrX 166440034 166441401 + 1.49609332899401 NA promoter-TSS (NM_025432) promoter-TSS (NM_025432) -13 NM_177429 237222 Mm.247480 NM_177429 ENSMUSG00000040586 Ofd1 Cxorf5|DXGgc7e|ORF2 oral-facial-digital syndrome 1 gene homolog (human) protein-coding common_peak2_77_474_0.207772057575907_8.99566973200626_1.49609332899401 chr10 19520852 19522977 + 1.49609332899401 NA Intergenic Intergenic -70044 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_130_932_0.151353990995114_9.94141026634932_1.49501320064041 chr14 104336840 104337120 + 1.49501320064041 NA Intergenic (CGGAA)n|Simple_repeat|Simple_repeat 131019 NM_011143 18996 Mm.246550 NM_011143 ENSMUSG00000048349 Pou4f1 Brn-3|Brn-3.0|Brn3|Brn3.0|Brn3a|E130119J07Rik POU domain, class 4, transcription factor 1 protein-coding common_peak1_95_799_-0.176856099309918_9.55542814011977_1.49498533936891 chr15 6520186 6521363 + 1.49498533936891 NA Intergenic Intergenic -59073 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding unique_peak2_21_83_0.46748031991519_6.62605758273636_1.49484534480134-2 chr19 9033548 9034399 + 1.49484534480134 NA intron (NR_104460, intron 4 of 6) intron (NR_104460, intron 4 of 6) 16069 NR_105786 102465190 NR_105786 ENSMUSG00000099308 Mir6367 Gm27467|mmu-mir-6367 microRNA 6367 ncRNA common_peak1_21_83_0.46748031991519_6.62605758273636_1.49484534480134-5 chr5 123682746 123683280 + 1.49484534480134 NA intron (NM_019765, intron 1 of 23) intron (NM_019765, intron 1 of 23) 1348 NM_001291229 56430 Mm.241109 NM_019765 ENSMUSG00000049550 Clip1 1110007I12Rik|4631429H07Rik|AV017631|C81039|CLIP-170|CLIP170|CYLN1|Clip50|Rsn|mKIAA4046|restin CAP-GLY domain containing linker protein 1 protein-coding unique_peak2_21_83_0.46748031991519_6.62605758273636_1.49484534480134-3 chr5 92467618 92468399 + 1.49484534480134 NA intron (NM_007644, intron 2 of 11) PB1|SINE|Alu 9451 NR_105843 102466159 NR_105843 ENSMUSG00000099160 Mir6415 Gm27714|mmu-mir-6415 microRNA 6415 ncRNA unique_peak2_21_83_0.46748031991519_6.62605758273636_1.49484534480134-4 chr8 46778841 46779717 + 1.49484534480134 NA intron (NM_008391, intron 1 of 8) intron (NM_008391, intron 1 of 8) 39534 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_21_83_0.46748031991519_6.62605758273636_1.49484534480134-4 chr16 96907054 96907549 + 1.49484534480134 NA intron (NM_031174, intron 3 of 32) B4A|SINE|B4 263434 NM_031174 13508 Mm.102437 NM_031174 ENSMUSG00000050272 Dscam 4932410A21Rik Down syndrome cell adhesion molecule protein-coding unique_peak2_21_83_0.46748031991519_6.62605758273636_1.49484534480134 chr11 107462274 107462921 + 1.49484534480134 NA intron (NM_145823, intron 1 of 9) B3|SINE|B2 8123 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_21_83_0.46748031991519_6.62605758273636_1.49484534480134-6 chr7 143295238 143295752 + 1.49484534480134 NA non-coding (NR_001461, exon 1 of 1) non-coding (NR_001461, exon 1 of 1) 1052 NR_001461 63830 Mm.356096 NR_001461 ENSMUSG00000101609 Kcnq1ot1 Kvlqt1-as|Lit1|Tssc8 KCNQ1 overlapping transcript 1 ncRNA common_peak1_21_83_0.46748031991519_6.62605758273636_1.49484534480134-2 chr10 121596416 121596975 + 1.49484534480134 NA intron (NM_001081056, intron 22 of 24) intron (NM_001081056, intron 22 of 24) -9901 NM_019786 56480 Mm.34580 NM_019786 ENSMUSG00000020115 Tbk1 1200008B05Rik|AI462036|AW048562 TANK-binding kinase 1 protein-coding common_peak1_21_83_0.46748031991519_6.62605758273636_1.49484534480134 chr1 52801313 52801747 + 1.49484534480134 NA intron (NM_008384, intron 1 of 5) intron (NM_008384, intron 1 of 5) 16158 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding common_peak1_21_83_0.46748031991519_6.62605758273636_1.49484534480134-3 chr11 50059011 50059457 + 1.49484534480134 NA intron (NM_001290749, intron 2 of 7) intron (NM_001290749, intron 2 of 7) -10468 NR_029769 723845 NR_029769 ENSMUSG00000065417 Mir340 Mirn340|mir-340|mmu-mir-340 microRNA 340 ncRNA common_peak1_38_186_0.326048989720224_7.70991895474775_1.49484446592388-3 chr9 92252626 92253533 + 1.49484446592388 NA intron (NM_011636, intron 1 of 8) intron (NM_011636, intron 1 of 8) 2885 NM_011636 22038 Mm.421956 NM_011636 ENSMUSG00000032369 Plscr1 MmTRA1a|MmTRA1b|Nor1|Tra1|Tra1a|Tra1b|Tras1|Tras2 phospholipid scramblase 1 protein-coding common_peak1_38_186_0.326048989720224_7.70991895474775_1.49484446592388-2 chr7 123396895 123397675 + 1.49484446592388 NA intron (NM_025304, intron 1 of 10) MTE2b|LTR|ERVL-MaLR 19303 NM_025304 30949 Mm.260527 NM_025304 ENSMUSG00000030763 Lcmt1 AL033290|LCMT-1|Lcmt leucine carboxyl methyltransferase 1 protein-coding common_peak1_38_186_0.326048989720224_7.70991895474775_1.49484446592388 chr11 72549882 72550669 + 1.49484446592388 NA promoter-TSS (NM_029932) promoter-TSS (NM_029932) -29 NM_029932 77577 Mm.46185 NM_029932 ENSMUSG00000020798 Spns3 9830002I17Rik spinster homolog 3 protein-coding common_peak1_131_1156_-0.145628579073898_10.1033588595705_1.49475184125431 chr6 142756553 142757544 + 1.49475184125431 NA intron (NM_009908, intron 1 of 7) CpG 362 NM_009908 12764 Mm.3820 NM_009908 ENSMUSG00000030282 Cmas AW208911|CMPNeu5Ac|D6Bwg0250e cytidine monophospho-N-acetylneuraminic acid synthetase protein-coding common_peak2_106_905_-0.164396820690461_9.741168829701_1.4943934947193 chr10 117855420 117857450 + 1.4943934947193 NA Intergenic Intergenic -10461 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak1_29_216_-0.352894799846776_7.58510383252109_1.49423560157095 chr1 37000495 37001027 + 1.49423560157095 NA Intergenic L1MDa|LINE|L1 -61234 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding common_peak2_314_2860_0.087410964506919_11.5260092645766_1.49368464417579 chr2 167628417 167633495 + 1.49368464417579 NA intron (NM_001311131, intron 1 of 4) intron (NM_001311131, intron 1 of 4) 1049 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak2_155_1168_0.135108857448918_10.2586136432561_1.49312794420162 chr14 59596873 59598705 + 1.49312794420162 NA exon (NM_001168535, exon 1 of 11) exon (NM_001168535, exon 1 of 11) 170 NM_001168537 71891 Mm.439850 NM_027986 ENSMUSG00000021982 Cdadc1 2310010M10Rik|AI449174|AI463398|BB130816|NYD-SP15 cytidine and dCMP deaminase domain containing 1 protein-coding common_peak1_89_572_0.190399619994082_9.25759113875395_1.49286410976737 chr7 16206659 16207569 + 1.49286410976737 NA intron (NM_027883, intron 7 of 16) intron (NM_027883, intron 7 of 16) 14879 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak1_35_263_-0.313096446299431_7.88784589620874_1.49237773394498-2 chr7 25274786 25275456 + 1.49237773394498 NA intron (NM_001302811, intron 2 of 20) intron (NM_001302811, intron 2 of 20) -7058 NM_027882 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak1_35_263_-0.313096446299431_7.88784589620874_1.49237773394498 chr15 27785134 27785987 + 1.49237773394498 NA intron (NM_001081302, intron 34 of 56) intron (NM_001081302, intron 34 of 56) -104018 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak2_35_263_-0.313096446299431_7.88784589620874_1.49237773394498 chr12 12246424 12247922 + 1.49237773394498 NA Intergenic Intergenic -14966 NM_029758 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding common_peak1_74_450_0.213166085034286_8.92356666577252_1.49143667210049 chr11 60913171 60914506 + 1.49143667210049 NA promoter-TSS (NM_025294) promoter-TSS (NM_025294) -46 NM_025294 24083 Mm.22780 NM_025294 ENSMUSG00000018931 Natd1 AI256713|F3-2|Gm16515|Gtlf3b N-acetyltransferase domain containing 1 protein-coding common_peak1_152_1374_-0.133410610018643_10.3585105982901_1.49129171410111 chr16 52093407 52095539 + 1.49129171410111 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 62924 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak2_40_304_-0.291222167384823_8.10705434875784_1.49082683024696 chr11 82213858 82215453 + 1.49082683024696 NA Intergenic Intergenic -34843 NM_011329 20290 Mm.1283 NM_011329 ENSMUSG00000020702 Ccl1 BF534335|I-309|Scya1|Tca-3 chemokine (C-C motif) ligand 1 protein-coding common_peak1_40_304_-0.291222167384823_8.10705434875784_1.49082683024696 chrX 107089323 107090119 + 1.49082683024696 NA 5' UTR (NM_172435, exon 2 of 3) 5' UTR (NM_172435, exon 2 of 3) 386 NM_172435 78826 Mm.74639 NM_172435 ENSMUSG00000050921 P2ry10 5830408N17Rik|Lypsr2|P2Y10 purinergic receptor P2Y, G-protein coupled 10 protein-coding common_peak2_379_3624_0.0779291328582623_11.8627298462188_1.49050140568048 chr3 52267270 52272056 + 1.49050140568048 NA intron (NM_019739, intron 1 of 2) CpG 1326 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_98_648_0.179379795815025_9.43176456590665_1.49023693880038 chr8 116634354 116635842 + 1.49023693880038 NA intron (NM_029441, intron 1 of 6) intron (NM_029441, intron 1 of 6) 97893 NM_029441 75796 Mm.159575 NM_029441 ENSMUSG00000031758 Cdyl2 1700029M19Rik|4930453I21Rik|Gm20194 chromodomain protein, Y chromosome-like 2 protein-coding unique_peak2_22_89_0.446607707763835_6.71515695021159_1.49022585797587 chr12 25430823 25431733 + 1.49022585797587 NA Intergenic Intergenic 302104 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak2_22_89_0.446607707763835_6.71515695021159_1.49022585797587-2 chr13 37880357 37881126 + 1.49022585797587 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) -7693 NR_033218 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_22_89_0.446607707763835_6.71515695021159_1.49022585797587-3 chr3 66985747 66986344 + 1.49022585797587 NA intron (NM_025822, intron 1 of 9) CpG 373 NM_025822 66880 Mm.316418 NM_025822 ENSMUSG00000034544 Rsrc1 1200013F24Rik|SRrp53 arginine/serine-rich coiled-coil 1 protein-coding common_peak1_22_89_0.446607707763835_6.71515695021159_1.49022585797587-2 chr1 191025491 191025965 + 1.49022585797587 NA exon (NM_001313747, exon 1 of 9) exon (NM_001313747, exon 1 of 9) 377 NR_027298 100125339 Mm.472263 NR_027298 ENSMUSG00000097845 A230020J21Rik ENSMUSG00000066596 RIKEN cDNA A230020J21 gene ncRNA common_peak2_22_89_0.446607707763835_6.71515695021159_1.49022585797587 chr2 126606328 126606987 + 1.49022585797587 NA intron (NM_008230, intron 3 of 11) intron (NM_008230, intron 3 of 11) 12021 NM_008230 15186 Mm.18603 NM_008230 ENSMUSG00000027360 Hdc AW108189|Hdc-a|Hdc-c|Hdc-e|Hdc-s histidine decarboxylase protein-coding common_peak1_22_89_0.446607707763835_6.71515695021159_1.49022585797587 chr1 34483852 34484385 + 1.49022585797587 NA Intergenic Intergenic -14312 NM_009355 21755 Mm.10725 NM_009355 ENSMUSG00000026125 Prss39 Tesp1 protease, serine 39 protein-coding common_peak1_22_89_0.446607707763835_6.71515695021159_1.49022585797587-4 chr4 120669847 120670333 + 1.49022585797587 NA Intergenic Intergenic 3527 NM_019563 56222 Mm.272646 NM_019563 ENSMUSG00000070803 Cited4 MRG-2|Mrg2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 protein-coding common_peak2_110_945_-0.161778205974699_9.80480727035205_1.48994414650634 chr17 31564607 31566098 + 1.48994414650634 NA intron (NM_016670, intron 1 of 10) CpG 579 NM_016670 18771 Mm.259295 NM_016670 ENSMUSG00000006705 Pknox1 D17Wsu76e|PREP1 Pbx/knotted 1 homeobox protein-coding common_peak2_99_837_-0.171566619190257_9.62502312410422_1.48963916408818 chr16 91930876 91932356 + 1.48963916408818 NA promoter-TSS (NM_138597) promoter-TSS (NM_138597) 14 NM_138597 28080 Mm.41 NM_138597 ENSMUSG00000022956 Atp5o ATPO|D12Wsu28e|OSCP ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit protein-coding common_peak1_20_78_0.473693895621395_6.5406276959878_1.48956789618285-5 chr7 142376664 142377298 + 1.48956789618285 NA intron (NM_009983, intron 7 of 8) intron (NM_009983, intron 7 of 8) -4722 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding unique_peak2_20_78_0.473693895621395_6.5406276959878_1.48956789618285-3 chr9 32535408 32536114 + 1.48956789618285 NA intron (NM_008026, intron 1 of 8) ID_B1|SINE|B4 5691 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_20_78_0.473693895621395_6.5406276959878_1.48956789618285-2 chr11 32566131 32566577 + 1.48956789618285 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 33088 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_20_78_0.473693895621395_6.5406276959878_1.48956789618285-4 chr6 112888908 112889447 + 1.48956789618285 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 58089 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak1_20_78_0.473693895621395_6.5406276959878_1.48956789618285 chr1 153088647 153089201 + 1.48956789618285 NA intron (NM_175460, intron 6 of 10) intron (NM_175460, intron 6 of 10) 97523 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding unique_peak2_20_78_0.473693895621395_6.5406276959878_1.48956789618285 chr11 75945927 75946651 + 1.48956789618285 NA Intergenic Intergenic -20398 NM_001291159 380714 Mm.425697 NM_029548 ENSMUSG00000020847 Rph3al Gm1753|Noc2 rabphilin 3A-like (without C2 domains) protein-coding common_peak1_20_78_0.473693895621395_6.5406276959878_1.48956789618285-3 chr19 11417841 11418330 + 1.48956789618285 NA intron (NM_029499, intron 4 of 6) intron (NM_029499, intron 4 of 6) 10424 NM_029499 64380 Mm.440715 NM_029499 ENSMUSG00000024675 Ms4a4c 5830413L19Rik|AI449185|Ms4a9 membrane-spanning 4-domains, subfamily A, member 4C protein-coding unique_peak1_20_78_0.473693895621395_6.5406276959878_1.48956789618285 chr8 83695537 83695998 + 1.48956789618285 NA intron (NM_177262, intron 1 of 21) intron (NM_177262, intron 1 of 21) -1706 NM_001199593 320795 Mm.213000 NM_177262 ENSMUSG00000057672 Pkn1 DBK|F730027O18Rik|PAK1|PRK1|Pkn|Prkcl1|Stk3 protein kinase N1 protein-coding unique_peak2_20_78_0.473693895621395_6.5406276959878_1.48956789618285-2 chr11 109218834 109219559 + 1.48956789618285 NA Intergenic MLT1C|LTR|ERVL-MaLR -74827 NR_037978 268498 Mm.227970 NM_001085512 ENSMUSG00000078605 E030025P04Rik Gm664 RIKEN cDNA E030025P04 gene ncRNA common_peak2_85_703_-0.187092137196991_9.3658855500388_1.48950329281682 chrX 70385023 70386644 + 1.48950329281682 NA promoter-TSS (NM_026787) promoter-TSS (NM_026787) -80 NM_026787 68618 Mm.293255 NM_026787 ENSMUSG00000045237 1110012L19Rik - RIKEN cDNA 1110012L19 gene protein-coding common_peak1_28_208_-0.358695817568314_7.52801122329673_1.48919110991866 chr7 139143350 139143945 + 1.48919110991866 NA intron (NM_001162540, intron 1 of 11) intron (NM_001162540, intron 1 of 11) 44847 NM_021302 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding common_peak1_48_371_-0.262282574197346_8.40801752400936_1.48911938603508 chr15 88818655 88819340 + 1.48911938603508 NA promoter-TSS (NM_029720) promoter-TSS (NM_029720) 321 NM_001142357 223774 Mm.41512 NM_145477 ENSMUSG00000035845 Alg12 ECM39 asparagine-linked glycosylation 12 (alpha-1,6-mannosyltransferase) protein-coding common_peak2_315_2872_0.0869814359535042_11.5318329955093_1.48885133162886 chr15 36639766 36643347 + 1.48885133162886 NA Intergenic PB1D9|SINE|Alu -32583 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak2_196_1575_0.117054797168924_10.6805792180408_1.48866049249544 chr2 36135597 36137579 + 1.48866049249544 NA non-coding (NR_027515, exon 1 of 6) non-coding (NR_027515, exon 1 of 6) 116 NM_026434 67889 Mm.205937 NM_026434 ENSMUSG00000026889 Rbm18 2010004P11Rik|AU015530 RNA binding motif protein 18 protein-coding common_peak1_44_337_-0.274700798717552_8.26352903692341_1.488637938365 chr11 55136947 55137505 + 1.488637938365 NA intron (NM_172258, intron 6 of 10) intron (NM_172258, intron 6 of 10) 14480 NM_172258 215332 Mm.87054 NM_172258 ENSMUSG00000049491 Slc36a3 PAT3|TRAMD2|tramdorin2 solute carrier family 36 (proton/amino acid symporter), member 3 protein-coding common_peak2_44_337_-0.274700798717552_8.26352903692341_1.488637938365 chr4 63845965 63847931 + 1.488637938365 NA intron (NM_009403, intron 2 of 3) intron (NM_009403, intron 2 of 3) 14336 NM_009403 21949 Mm.4664 NM_009403 ENSMUSG00000028362 Tnfsf8 CD153|CD30LG|Cd30l|Tnlg3a tumor necrosis factor (ligand) superfamily, member 8 protein-coding common_peak1_32_148_0.358151427198719_7.39824423406152_1.48860785767842 chr6 143114748 143115515 + 1.48860785767842 NA Intergenic Intergenic -14979 NM_001109688 74741 Mm.130260 NM_029081 ENSMUSG00000030279 C2cd5 5730419I09Rik|C030008B15Rik|CDP138 C2 calcium-dependent domain containing 5 protein-coding common_peak1_50_269_0.270855180076625_8.21224318708914_1.48858375004166 chr11 77493344 77494286 + 1.48858375004166 NA intron (NM_001004144, intron 1 of 19) CpG 403 NM_001004144 216963 Mm.290182 NM_001004144 ENSMUSG00000011877 Git1 Cat-1|p95Cat G protein-coupled receptor kinase-interactor 1 protein-coding common_peak1_50_269_0.270855180076625_8.21224318708914_1.48858375004166-2 chr6 35374329 35374993 + 1.48858375004166 NA Intergenic MER2|DNA|TcMar-Tigger 43815 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA common_peak2_42_213_0.304260183852804_7.89359707832755_1.487363351335 chr17 5439731 5440890 + 1.487363351335 NA promoter-TSS (NM_027457) promoter-TSS (NM_027457) -50 NM_027457 70544 Mm.46654 NM_027457 ENSMUSG00000004945 Tmem242 1110008A10Rik|2310046K16Rik|5730437N04Rik transmembrane protein 242 protein-coding common_peak1_42_213_0.304260183852804_7.89359707832755_1.487363351335-2 chr9 97310010 97310936 + 1.487363351335 NA Intergenic Intergenic 59485 NM_030219 78911 Mm.108347 NM_030219 ENSMUSG00000032451 Trim42 4930486B16Rik tripartite motif-containing 42 protein-coding common_peak1_42_213_0.304260183852804_7.89359707832755_1.487363351335 chr5 148769675 148770167 + 1.487363351335 NA Intergenic MLT1A0|LTR|ERVL-MaLR -8042 NR_131106 78015 Mm.243839 NR_131106 ENSMUSG00000085740 4930505K14Rik - RIKEN cDNA 4930505K14 gene ncRNA unique_peak2_14_104_-0.532201396254774_6.44814481953873_1.48610715801529 chr7 13123654 13124206 + 1.48610715801529 NA Intergenic Intergenic 8428 NM_134227 171261 Mm.377215 NM_134227 ENSMUSG00000070815 Vmn1r87 V1rk1 vomeronasal 1 receptor 87 protein-coding common_peak1_118_1024_-0.154335824153165_9.92424028231623_1.48601356051465 chr11 97781549 97783155 + 1.48601356051465 NA promoter-TSS (NR_028078) promoter-TSS (NR_028078) 87 NM_022891 65019 Mm.140380 NM_022891 ENSMUSG00000071415 Rpl23 2810009A01Rik ribosomal protein L23 protein-coding common_peak1_53_290_0.263944535117668_8.31684761046712_1.48564226118117 chr2 154655980 154656903 + 1.48564226118117 NA promoter-TSS (NM_029362) promoter-TSS (NM_029362) -585 NM_029362 75608 Mm.262480 NM_029362 ENSMUSG00000038467 Chmp4b 2010012F05Rik|C76846|Snf7-2 charged multivesicular body protein 4B protein-coding common_peak1_323_3335_-0.0843368680790721_11.6617351394051_1.48522136509695 chr1 165847578 165850938 + 1.48522136509695 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 60577 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_27_200_-0.364486941161003_7.46880822059843_1.48494564979003 chr2 151979679 151980269 + 1.48494564979003 NA intron (NM_146127, intron 1 of 1) CpG 245 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding unique_peak2_27_200_-0.364486941161003_7.46880822059843_1.48494564979003 chr8 94417482 94418845 + 1.48494564979003 NA Intergenic Intergenic 16940 NR_015514 320377 Mm.486022 NR_015514 9330175E14Rik A630085K21 RIKEN cDNA 9330175E14 gene ncRNA common_peak2_117_815_0.159713374256686_9.75228202909984_1.48470920695474 chr5 3342129 3345190 + 1.48470920695474 NA promoter-TSS (NM_009873) promoter-TSS (NM_009873) -234 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak2_87_722_-0.184829471884454_9.40543710100889_1.48445872041332 chr2 70661455 70662515 + 1.48445872041332 NA intron (NM_027352, intron 1 of 9) CpG 476 NM_027352 70231 Mm.271950 NM_027352 ENSMUSG00000014959 Gorasp2 0610011A07Rik|2410043M02Rik|5730520M13Rik|9430094F20Rik|AW552058|ENSMUSG00000075299|GOLPH2|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding common_peak2_46_241_0.284267850151423_8.06099716235031_1.48438237033456 chr15 100494673 100495817 + 1.48438237033456 NA promoter-TSS (NM_153407) promoter-TSS (NM_153407) -6 NM_153407 207785 Mm.294969 NM_153407 ENSMUSG00000044636 Csrnp2 CSRNP-2|Csnrp2|taip-12 cysteine-serine-rich nuclear protein 2 protein-coding common_peak1_46_241_0.284267850151423_8.06099716235031_1.48438237033456 chr3 9454670 9455857 + 1.48438237033456 NA intron (NM_133218, intron 4 of 8) intron (NM_133218, intron 4 of 8) 52185 NR_015499 320088 Mm.212908 NR_015499 ENSMUSG00000097365 C030034L19Rik A130044O20Rik RIKEN cDNA C030034L19 gene ncRNA common_peak2_102_683_0.173695368890842_9.50470019933132_1.4839148770287 chr1 180640403 180642119 + 1.4839148770287 NA non-coding (NR_120498, exon 1 of 15) non-coding (NR_120498, exon 1 of 15) 111 NR_120498 72568 Mm.275044 NM_175186 ENSMUSG00000058729 Lin9 2700022J23Rik|Bara|Lin-9|TGS|TGS1|mLin-9 lin-9 homolog (C. elegans) protein-coding common_peak1_211_1730_0.111576378449186_10.8131781985912_1.48357425983303 chr7 111081621 111083201 + 1.48357425983303 NA intron (NM_001040131, intron 1 of 20) CpG 619 NM_001040131 13690 Mm.185453 NM_013507 ENSMUSG00000005610 Eif4g2 DAP-5|E130105L11Rik|Nat1|Natm1|p97 eukaryotic translation initiation factor 4, gamma 2 protein-coding unique_peak2_34_255_-0.318554285476466_7.84072285726177_1.48351295465946 chr17 12740922 12742571 + 1.48351295465946 NA intron (NR_027773, intron 1 of 2) CpG 435 NR_027784 104103 Mm.26553 NR_002853 ENSMUSG00000078247 Airn 2810051F02Rik|2810434M15Rik|AI256653|AI597500|AW049873|Air|B930018I07Rik|D17Ertd663e|IGF2RAS antisense Igf2r RNA ncRNA common_peak1_131_942_0.149430609358495_9.95582926535434_1.48299026438898 chr6 120488222 120490302 + 1.48299026438898 NA 3' UTR (NM_033567, exon 1 of 1) 3' UTR (NM_033567, exon 1 of 1) 4545 NM_033567 94047 Mm.23088 NM_033567 ENSMUSG00000094626 Cecr6 AW048664 cat eye syndrome chromosome region, candidate 6 protein-coding common_peak2_153_1384_-0.132336408977128_10.369502056448_1.48229563642548 chr16 18247556 18250254 + 1.48229563642548 NA promoter-TSS (NM_001080999) promoter-TSS (NM_001080999) 22 NM_001081000 15547 Mm.271798 NM_008307 ENSMUSG00000022721 Trmt2a Htf9c TRM2 tRNA methyltransferase 2A protein-coding common_peak1_37_180_0.327130627500041_7.66341120083323_1.48223417767395 chr9 107626235 107626976 + 1.48223417767395 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 8737 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak2_37_180_0.327130627500041_7.66341120083323_1.48223417767395 chr1 79710933 79712288 + 1.48223417767395 NA intron (NM_001111279, intron 8 of 11) intron (NM_001111279, intron 8 of 11) -39638 NM_183027 252903 Mm.32409 NM_183027 ENSMUSG00000054702 Ap1s3 1190009B22|Jr2|[s]3A adaptor-related protein complex AP-1, sigma 3 protein-coding common_peak1_69_555_-0.210883047013617_9.0134995492167_1.48221304556243 chr8 111299450 111300327 + 1.48221304556243 NA intron (NM_146218, intron 1 of 12) CpG 334 NM_146218 234736 Mm.334816 NM_146218 ENSMUSG00000033596 Rfwd3 BC027246 ring finger and WD repeat domain 3 protein-coding common_peak2_304_3103_-0.0872878042618357_11.5562689400562_1.48194803637561 chr18 34776275 34780047 + 1.48194803637561 NA intron (NM_001081256, intron 1 of 23) intron (NM_001081256, intron 1 of 23) 1153 NM_001081256 277250 Mm.277906 NM_029518 ENSMUSG00000038773 Kdm3b 5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082 KDM3B lysine (K)-specific demethylase 3B protein-coding common_peak1_77_629_-0.199652257593062_9.19938188959075_1.4816858246325 chr18 62977629 62978734 + 1.4816858246325 NA intron (NM_028017, intron 1 of 11) CpG 265 NM_028017 108123 Mm.292687 NM_028017 ENSMUSG00000024581 Napg 2400003O04Rik|SNARE N-ethylmaleimide sensitive fusion protein attachment protein gamma protein-coding unique_peak2_26_192_-0.370249470428486_7.40733230205384_1.48160518515011 chr7 126180716 126182174 + 1.48160518515011 NA intron (NM_001311143, intron 1 of 23) MTE2b|LTR|ERVL-MaLR 18963 NM_028816 74204 Mm.235663 NM_028816 ENSMUSG00000000131 Xpo6 2610005L19Rik|AL022631|C230091E20Rik|R75304|Ranbp20|mKIAA0370 exportin 6 protein-coding common_peak1_26_192_-0.370249470428486_7.40733230205384_1.48160518515011 chr10 117864045 117864575 + 1.48160518515011 NA Intergenic Intergenic -18336 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak1_26_192_-0.370249470428486_7.40733230205384_1.48160518515011-2 chr12 110750698 110751391 + 1.48160518515011 NA intron (NM_027149, intron 1 of 2) B1_Mus1|SINE|Alu 13095 NM_027149 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding common_peak2_106_717_0.171130385532722_9.57340522658941_1.48087588663604 chr14 70271438 70275087 + 1.48087588663604 NA intron (NM_001304992, intron 1 of 12) RSINE1|SINE|B4 16235 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak2_403_3916_0.0745394030274227_11.9728031144645_1.48076845020026 chr4 59545629 59550426 + 1.48076845020026 NA intron (NM_144904, intron 1 of 14) intron (NM_144904, intron 1 of 14) 1337 NM_178164 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding common_peak2_95_623_0.181597871602559_9.37620115466353_1.48056190064945 chr17 56199752 56200255 + 1.48056190064945 NA intron (NM_172624, intron 10 of 20) (CATTC)n|Simple_repeat|Simple_repeat -16083 NM_080837 28106 Mm.294870 NM_080837 ENSMUSG00000019579 Mydgf D17Wsu104e|Il25|Ly6elg myeloid derived growth factor protein-coding common_peak2_62_357_0.237793382687526_8.60271246860802_1.48012454885695 chr10 5163141 5164776 + 1.48012454885695 NA intron (NM_001079686, intron 7 of 54) intron (NM_001079686, intron 7 of 54) 30749 NM_001079686 64009 Mm.331626 NM_022027 ENSMUSG00000096054 Syne1 8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756|myne-1 spectrin repeat containing, nuclear envelope 1 protein-coding common_peak1_54_422_-0.243222834734034_8.60290243575293_1.48012454885695 chr1 88064898 88066008 + 1.48012454885695 NA intron (NM_201641, intron 1 of 4) intron (NM_201641, intron 1 of 4) -5326 NM_201644 394434 Mm.300095 NM_201644 ENSMUSG00000090175 Ugt1a9 UDPGT|UDPGT 1-9|UGT1-09|UGT1.9|UGTP4|Ugt1a12|mUGTBr/P UDP glucuronosyltransferase 1 family, polypeptide A9 protein-coding common_peak2_62_357_0.237793382687526_8.60271246860802_1.48012454885695-2 chr13 51935698 51937372 + 1.48012454885695 NA Intergenic Intergenic 89860 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_62_357_0.237793382687526_8.60271246860802_1.48012454885695-3 chr15 100672843 100674802 + 1.48012454885695 NA TTS (NM_033612) TTS (NM_033612) -4322 NM_001270537 668218 Mm.451225 NM_001270537 ENSMUSG00000098112 Bin2 - bridging integrator 2 protein-coding common_peak2_62_357_0.237793382687526_8.60271246860802_1.48012454885695-4 chr5 124943381 124945244 + 1.48012454885695 NA Intergenic Intergenic -59163 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak2_89_741_-0.182484427869815_9.44403316268589_1.47999384825597 chr9 107533761 107535312 + 1.47999384825597 NA exon (NM_019704, exon 1 of 2) exon (NM_019704, exon 1 of 2) 591 NM_019704 56395 Mm.260153 NM_019704 ENSMUSG00000010045 Tmem115 C78915|Pl6|Pp6 transmembrane protein 115 protein-coding common_peak1_39_296_-0.296572581983634_8.06603282980895_1.47996839507873 chr5 8622079 8622932 + 1.47996839507873 NA exon (NM_198620, exon 1 of 10) exon (NM_198620, exon 1 of 10) 447 NM_198620 242819 Mm.332192 NM_198620 ENSMUSG00000040570 Rundc3b Gm440 RUN domain containing 3B protein-coding common_peak2_150_1120_0.137949822180126_10.1995454738955_1.47987398097425 chr1 161069765 161072543 + 1.47987398097425 NA promoter-TSS (NM_172644) promoter-TSS (NM_172644) 387 NR_131028 70454 Mm.248212 NM_027429 ENSMUSG00000026708 Cenpl 2610300B10Rik|AW121806|AW550697|CENP-L centromere protein L protein-coding common_peak1_66_528_-0.216580211964303_8.93883380613187_1.47930428120739 chr11 34063289 34064478 + 1.47930428120739 NA intron (NM_010696, intron 3 of 20) intron (NM_010696, intron 3 of 20) 16682 NM_010696 16822 Mm.265350 NM_010696 ENSMUSG00000002699 Lcp2 AI323664|BB161688|SLP-76|SLP76|m1Khoe|twm lymphocyte cytosolic protein 2 protein-coding common_peak2_243_2380_-0.0996078318506513_11.167547989345_1.47919800903911 chr15 64021314 64024932 + 1.47919800903911 NA intron (NM_144846, intron 1 of 11) B3|SINE|B2 37325 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_382_3661_0.0771942211310819_11.8770131863629_1.47879989754364 chr9 108647954 108650655 + 1.47879989754364 NA promoter-TSS (NM_011790) promoter-TSS (NM_011790) 76 NM_011790 23807 Mm.290447 NM_011790 ENSMUSG00000064145 Arih2 AI843547|ARI2|TRIAD1|UIP48 ariadne RBR E3 ubiquitin protein ligase 2 protein-coding common_peak1_306_2769_0.0885210109635857_11.4799307664183_1.47838682575411 chr7 6154702 6156980 + 1.47838682575411 NA intron (NM_001013012, intron 1 of 2) CpG 130 NM_001013012 67109 Mm.3254 NM_001013012 ENSMUSG00000046792 Zfp787 2210018M03Rik|Znf787 zinc finger protein 787 protein-coding unique_peak2_59_335_0.2429513210053_8.51379308328141_1.47827644808645 chr2 167329901 167332686 + 1.47827644808645 NA intron (NM_019835, intron 1 of 8) intron (NM_019835, intron 1 of 8) 17885 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak1_78_482_0.206219712277543_9.01898923497454_1.47765772152548 chr2 4567325 4568604 + 1.47765772152548 NA intron (NM_001177843, intron 13 of 23) intron (NM_001177843, intron 13 of 23) 8210 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294 FERM domain containing 4A protein-coding common_peak1_97_640_0.179308001478299_9.41383454735789_1.47751874464638 chr4 139574576 139575794 + 1.47751874464638 NA exon (NM_001205173, exon 1 of 9) exon (NM_001205173, exon 1 of 9) 465 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak2_357_3755_-0.0788244510446496_11.8355691221314_1.47738207477645 chr12 69680059 69683798 + 1.47738207477645 NA promoter-TSS (NM_001135559) promoter-TSS (NM_001135559) -76 NM_001135559 20663 Mm.3770 NM_001135559 ENSMUSG00000034801 Sos2 SOS-2|mSOS-2 son of sevenless homolog 2 (Drosophila) protein-coding common_peak1_143_1279_-0.137405799455626_10.2532251951595_1.47697506020683 chr11 44544437 44546813 + 1.47697506020683 NA intron (NM_028862, intron 4 of 10) intron (NM_028862, intron 4 of 10) 26248 NM_001166553 74315 Mm.156771 NM_028862 ENSMUSG00000019189 Rnf145 3732413I11Rik|TMRF1 ring finger protein 145 protein-coding common_peak1_15_111_-0.511101658932436_6.55180409259139_1.47693584804675-3 chr16 16994361 16994792 + 1.47693584804675 NA intron (NM_011949, intron 1 of 8) B2_Mm2|SINE|B2 11194 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak1_15_111_-0.511101658932436_6.55180409259139_1.47693584804675 chr1 191325439 191325801 + 1.47693584804675 NA promoter-TSS (NM_025864) promoter-TSS (NM_025864) -345 NM_025864 66950 Mm.236300 NM_025864 ENSMUSG00000026627 Tmem206 2310028N02Rik|AI118576 transmembrane protein 206 protein-coding common_peak1_15_111_-0.511101658932436_6.55180409259139_1.47693584804675-2 chr13 6642479 6642992 + 1.47693584804675 NA intron (NM_001291071, intron 1 of 21) intron (NM_001291071, intron 1 of 21) 6036 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding common_peak2_575_6113_0.0598460809174757_12.6078238773457_1.47676397869696 chr5 140593412 140598963 + 1.47676397869696 NA Intergenic Intergenic -11154 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_113_974_-0.158147377900441_9.85018471968675_1.47664330314671 chr1 164062820 164064435 + 1.47664330314671 NA intron (NM_011346, intron 2 of 8) intron (NM_011346, intron 2 of 8) 1551 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak1_110_753_0.165497454096032_9.64116944031668_1.47624374228221 chr7 143822058 143823651 + 1.47624374228221 NA promoter-TSS (NM_030221) promoter-TSS (NM_030221) -2 NM_030221 78914 Mm.35104 NM_030221 ENSMUSG00000031090 Nadsyn1 9130012B15Rik NAD synthetase 1 protein-coding common_peak2_110_753_0.165497454096032_9.64116944031668_1.47624374228221 chr11 23496918 23498048 + 1.47624374228221 NA intron (NM_001290655, intron 1 of 8) intron (NM_001290655, intron 1 of 8) 556 NM_001290655 268390 Mm.13148 NM_172391 ENSMUSG00000020288 Ahsa2 - AHA1, activator of heat shock protein ATPase 2 protein-coding common_peak2_217_1793_0.109390371796732_10.8636593608176_1.47581979148267 chr11 115130901 115135779 + 1.47581979148267 NA intron (NM_145634, intron 1 of 6) 4.5SRNA|scRNA|scRNA 652 NM_001169153 246746 Mm.277387 NM_145634 ENSMUSG00000047798 Cd300lf CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3 CD300 molecule like family member F protein-coding common_peak1_186_1474_0.120418434965458_10.5867084566193_1.47574774694752 chr6 65646673 65649289 + 1.47574774694752 NA Intergenic Intergenic -23630 NM_172399 68169 Mm.52392 NM_172399 ENSMUSG00000049001 Ndnf A930038C07Rik|epidermacan neuron-derived neurotrophic factor protein-coding common_peak1_33_247_-0.324047738226348_7.7921724412737_1.47502830654167 chr9 45235506 45236227 + 1.47502830654167 NA intron (NM_001198971, intron 1 of 4) intron (NM_001198971, intron 1 of 4) 30841 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak2_99_657_0.177296040773854_9.45059179412217_1.47493823244157 chr11 117993720 117996062 + 1.47493823244157 NA intron (NM_133757, intron 1 of 9) intron (NM_133757, intron 1 of 9) -7379 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA common_peak2_205_1668_0.113391955600498_10.7614642171628_1.47485499588696 chr2 52569699 52573164 + 1.47485499588696 NA intron (NM_001285426, intron 2 of 13) intron (NM_001285426, intron 2 of 13) -12820 NM_001285427 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding unique_peak2_10_76_-0.633601109187305_5.94998598610125_1.47445399465373-5 chr7 36706480 36706989 + 1.47445399465373 NA intron (NM_172298, intron 1 of 1) intron (NM_172298, intron 1 of 1) 8616 NM_172298 243931 Mm.44141 NM_172298 ENSMUSG00000021217 Tshz3 A630038G13Rik|Tsh3|Zfp537|mKIAA1474|teashirt3 teashirt zinc finger family member 3 protein-coding unique_peak2_10_76_-0.633601109187305_5.94998598610125_1.47445399465373 chr10 7907374 7907991 + 1.47445399465373 NA intron (NM_138667, intron 6 of 6) intron (NM_138667, intron 6 of 6) 48441 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding unique_peak2_10_76_-0.633601109187305_5.94998598610125_1.47445399465373-3 chr12 25994302 25994865 + 1.47445399465373 NA Intergenic Intergenic 215922 NR_131149 629481 Mm.390460 NR_131149 Gm29687 - predicted gene, 29687 ncRNA unique_peak2_10_76_-0.633601109187305_5.94998598610125_1.47445399465373-2 chr11 46324477 46325114 + 1.47445399465373 NA TTS (NM_010583) TTS (NM_010583) -11936 NM_001252459 76884 Mm.154358 NM_133769 ENSMUSG00000020340 Cyfip2 1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168 cytoplasmic FMR1 interacting protein 2 protein-coding unique_peak2_10_76_-0.633601109187305_5.94998598610125_1.47445399465373-4 chr14 56864892 56865427 + 1.47445399465373 NA Intergenic CpG -22636 NM_029498 76007 Mm.31417 NM_029498 ENSMUSG00000021945 Zmym2 5830413P05Rik|FIM|MYM|RAMP|SCLL|Zfp198|Znf198 zinc finger, MYM-type 2 protein-coding common_peak2_672_7427_0.0544095166342853_12.8859628582526_1.47426858485856 chr5 64482788 64492578 + 1.47426858485856 NA Intergenic Intergenic 10675 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA common_peak2_71_573_-0.206996942430308_9.06140845546053_1.47420682073038 chr9 77754303 77755611 + 1.47420682073038 NA exon (NM_010295, exon 1 of 16) exon (NM_010295, exon 1 of 16) 422 NM_010295 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding common_peak1_71_573_-0.206996942430308_9.06140845546053_1.47420682073038 chr13 74462273 74463535 + 1.47420682073038 NA Intergenic Intergenic 31046 NM_146231 235956 Mm.296909 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak2_70_419_0.218914028180894_8.82370253175657_1.47402333574132 chr5 135063767 135064897 + 1.47402333574132 NA exon (NM_025362, exon 1 of 1) exon (NM_025362, exon 1 of 1) 126 NM_025362 66114 Mm.178012 NM_025362 ENSMUSG00000061118 Dnajc30 1300007M11Rik|Wbscr18 DnaJ heat shock protein family (Hsp40) member C30 protein-coding common_peak1_45_234_0.288556168714866_8.02079503092243_1.47381889417535 chr8 57400693 57401664 + 1.47381889417535 NA Intergenic Intergenic -54745 NM_009136 20284 Mm.12886 NM_009136 ENSMUSG00000031610 Scrg1 AW124307 scrapie responsive gene 1 protein-coding common_peak1_38_287_-0.296981551834452_8.02143422552509_1.47381889417535 chr2 28192940 28193670 + 1.47381889417535 NA 5' UTR (NM_001038614, exon 1 of 4) 5' UTR (NM_001038614, exon 1 of 4) 212 NM_001038614 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding common_peak2_127_1114_-0.14673779812343_10.049459095746_1.47367231604304 chr3 145117903 145119486 + 1.47367231604304 NA promoter-TSS (NM_025714) promoter-TSS (NM_025714) 94 NM_025714 52184 Mm.259105 NM_025714 ENSMUSG00000028256 Odf2l 4733401D09Rik|9630045K08Rik|D3Ertd250e outer dense fiber of sperm tails 2-like protein-coding common_peak2_183_1705_-0.118104193665712_10.6773498344854_1.47349650933245 chr1 177794386 177797218 + 1.47349650933245 NA intron (NM_007422, intron 1 of 12) intron (NM_007422, intron 1 of 12) 707 NM_007422 11566 Mm.338021 NM_007422 ENSMUSG00000015961 Adss AI314886|AS|Adss2 adenylosuccinate synthetase, non muscle protein-coding common_peak2_125_1094_-0.148493683350397_10.0224683128133_1.47342267247286 chr2 126473222 126476956 + 1.47342267247286 NA intron (NM_001080944, intron 3 of 27) URR1B|DNA|hAT-Charlie 16464 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding unique_peak2_41_207_0.303647236843763_7.85226333656297_1.47327921201127 chr1 119709944 119711789 + 1.47327921201127 NA intron (NM_019933, intron 13 of 26) L1_Mus1|LINE|L1 -61866 NM_145506 226352 Mm.253156 NM_145506 ENSMUSG00000026383 Epb41l5 1700030C16Rik|AL022914|BE37|E230025E14Rik|Epb4.1l5|Lulu1|NBL5 erythrocyte membrane protein band 4.1 like 5 protein-coding common_peak2_85_539_0.195523884389473_9.17457753924557_1.47326071225633 chr4 45401827 45404432 + 1.47326071225633 NA intron (NM_001009949, intron 2 of 2) intron (NM_001009949, intron 2 of 2) 5637 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak1_25_185_-0.383737566467099_7.34729002787448_1.47207094808036 chr14 60723256 60723718 + 1.47207094808036 NA intron (NM_001033272, intron 4 of 12) Tigger13a|DNA|TcMar-Tigger -9417 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding unique_peak2_25_185_-0.383737566467099_7.34729002787448_1.47207094808036 chr9 95311303 95312590 + 1.47207094808036 NA Intergenic Intergenic 95324 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak1_12_38_0.643406714592328_5.60710557615841_1.47201190833625-2 chr4 133681175 133681582 + 1.47201190833625 NA exon (NM_001080819, exon 20 of 20) exon (NM_001080819, exon 20 of 20) -8731 NM_001145956 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak1_12_38_0.643406714592328_5.60710557615841_1.47201190833625 chr1 21870184 21870580 + 1.47201190833625 NA intron (NM_001310477, intron 1 of 12) Lx5|LINE|L1 91560 NM_001160139 226922 Mm.336519 NM_023872 ENSMUSG00000028033 Kcnq5 7730402H11|9230107O05Rik|AA589396|D1Mgi1 potassium voltage-gated channel, subfamily Q, member 5 protein-coding common_peak2_166_1276_0.128203795985236_10.3826447076953_1.47167829114193 chr12 100186411 100188558 + 1.47167829114193 NA promoter-TSS (NR_045282) promoter-TSS (NR_045282) -484 NR_045282 100038378 Mm.387075 NR_045282 ENSMUSG00000072884 Gm10433 ENSMUSG00000072884 predicted gene 10433 ncRNA common_peak1_104_885_-0.165582657878199_9.70837155961592_1.47166037030968 chr5 29568949 29570221 + 1.47166037030968 NA intron (NM_133907, intron 1 of 22) CpG 343 NM_133907 100763 Mm.137746 NM_133907 ENSMUSG00000039000 Ube3c AI853514|mKIAA0010 ubiquitin protein ligase E3C protein-coding common_peak1_50_388_-0.255955567858736_8.47564856105683_1.47157084425868 chr10 80406193 80406996 + 1.47157084425868 NA intron (NM_025650, intron 1 of 2) intron (NM_025650, intron 1 of 2) 227 NM_025650 66594 Mm.379119 NM_025650 ENSMUSG00000020163 Uqcr11 0710008D09Rik|AL022707|Uqcr ubiquinol-cytochrome c reductase, complex III subunit XI protein-coding common_peak2_181_1683_-0.118719069159992_10.6583168884864_1.47129121457524 chr2 114143323 114147204 + 1.47129121457524 NA intron (NM_001290788, intron 14 of 33) intron (NM_001290788, intron 14 of 33) 5307 NR_105968 102465982 NR_105968 ENSMUSG00000098464 Mir7002 Gm27429|mmu-mir-7002 microRNA 7002 ncRNA common_peak1_16_118_-0.491281502333772_6.64917701214106_1.47110896690762-6 chr7 128179032 128179492 + 1.47110896690762 NA intron (NM_001029872, intron 5 of 30) intron (NM_001029872, intron 5 of 30) 5316 NM_001029872 381924 Mm.334257 NM_001029872 ENSMUSG00000070369 Itgad Cd11d integrin, alpha D protein-coding common_peak1_16_118_-0.491281502333772_6.64917701214106_1.47110896690762 chr1 161763941 161764325 + 1.47110896690762 NA Intergenic Intergenic 24362 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_16_118_-0.491281502333772_6.64917701214106_1.47110896690762-5 chr6 91113911 91114270 + 1.47110896690762 NA intron (NM_018815, intron 1 of 39) intron (NM_018815, intron 1 of 39) 2736 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak1_16_118_-0.491281502333772_6.64917701214106_1.47110896690762-4 chr2 118491448 118491818 + 1.47110896690762 NA Intergenic Intergenic -11937 NM_009273 20813 Mm.363404 NM_009273 ENSMUSG00000009549 Srp14 14kDa|AW536328 signal recognition particle 14 protein-coding common_peak1_16_118_-0.491281502333772_6.64917701214106_1.47110896690762-3 chr13 92274531 92274942 + 1.47110896690762 NA exon (NM_010829, exon 14 of 24) exon (NM_010829, exon 14 of 24) -80047 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding common_peak1_16_118_-0.491281502333772_6.64917701214106_1.47110896690762-2 chr10 84621766 84622128 + 1.47110896690762 NA promoter-TSS (NM_027423) promoter-TSS (NM_027423) -490 NM_027423 70428 Mm.335007 NM_027423 ENSMUSG00000034453 Polr3b 2700078H01Rik|A330032P03Rik|C85372|RPC2 polymerase (RNA) III (DNA directed) polypeptide B protein-coding common_peak2_30_136_0.36865012177378_7.28235714384742_1.47060067084112-2 chr7 80679975 80680799 + 1.47060067084112 NA intron (NM_173863, intron 1 of 14) intron (NM_173863, intron 1 of 14) 8490 NM_173863 70461 Mm.392175 NM_173863 ENSMUSG00000030527 Crtc3 2610312F20Rik|6332415K15Rik|AI429792|BC011210|TORC3 CREB regulated transcription coactivator 3 protein-coding common_peak2_24_177_-0.389718238830014_7.28087431155139_1.47060067084112 chr13 115097865 115099123 + 1.47060067084112 NA intron (NM_001033228, intron 1 of 28) intron (NM_001033228, intron 1 of 28) 3470 NM_001033228 109700 Mm.317280 NM_001033228 ENSMUSG00000042284 Itga1 CD49A|E130012M19Rik|Vla1 integrin alpha 1 protein-coding common_peak2_30_136_0.36865012177378_7.28235714384742_1.47060067084112 chr16 30024367 30025447 + 1.47060067084112 NA intron (NR_045878, intron 3 of 3) intron (NR_045878, intron 3 of 3) 14572 NR_045878 71528 Mm.297640 NR_045878 9030404E10Rik - RIKEN cDNA 9030404E10 gene ncRNA common_peak1_30_136_0.36865012177378_7.28235714384742_1.47060067084112 chr7 127297617 127298267 + 1.47060067084112 NA intron (NM_001253873, intron 2 of 30) intron (NM_001253873, intron 2 of 30) 1682 NM_001253874 16408 Mm.1618 NM_008400 ENSMUSG00000030830 Itgal (p180)|Cd11a|LFA-1|LFA-1A|Ly-15|Ly-21 integrin alpha L protein-coding unique_peak2_30_136_0.36865012177378_7.28235714384742_1.47060067084112 chr12 100711133 100712041 + 1.47060067084112 NA intron (NM_153587, intron 1 of 17) intron (NM_153587, intron 1 of 17) 13441 NM_153587 73086 Mm.220417 NM_153587 ENSMUSG00000021180 Rps6ka5 3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK|RLSK|S6K-alpha-5 ribosomal protein S6 kinase, polypeptide 5 protein-coding common_peak1_106_904_-0.162803562614794_9.74037220066317_1.47058552397206 chr14 20928316 20930066 + 1.47058552397206 NA promoter-TSS (NM_009502) promoter-TSS (NM_009502) -242 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak2_23_169_-0.395615468045607_7.2115832021149_1.47044771712026 chr7 67355486 67356606 + 1.47044771712026 NA intron (NM_001291192, intron 1 of 10) ORR1E|LTR|ERVL-MaLR 16812 NM_001291192 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak1_23_169_-0.395615468045607_7.2115832021149_1.47044771712026 chr11 119942389 119942806 + 1.47044771712026 NA promoter-TSS (NM_001037754) promoter-TSS (NM_001037754) -495 NM_001037754 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding common_peak1_189_1505_0.11857604678964_10.6157940780667_1.4700865140697 chr16 43698186 43700153 + 1.4700865140697 NA Intergenic Intergenic -34985 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak2_36_174_0.328572539379081_7.61549738152187_1.46989587005414 chr14 67188440 67189387 + 1.46989587005414 NA Intergenic Intergenic -44379 NM_010095 13592 Mm.319947 NM_010095 ENSMUSG00000022053 Ebf2 D14Ggc1e|EBF-2|Mmot1|O/E-3|OE-3 early B cell factor 2 protein-coding common_peak1_36_174_0.328572539379081_7.61549738152187_1.46989587005414 chr13 30545535 30546277 + 1.46989587005414 NA promoter-TSS (NM_025710) promoter-TSS (NM_025710) -590 NM_025710 66694 Mm.181933 NM_025710 ENSMUSG00000038462 Uqcrfs1 4430402G14Rik|AI875505 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding common_peak2_36_174_0.328572539379081_7.61549738152187_1.46989587005414-2 chr19 11379478 11380626 + 1.46989587005414 NA intron (NM_001310331, intron 2 of 6) MTC|LTR|ERVL-MaLR 4564 NM_001310331 666907 NM_001310331 ENSMUSG00000101389 Ms4a4a EG666907 membrane-spanning 4-domains, subfamily A, member 4A protein-coding common_peak2_36_174_0.328572539379081_7.61549738152187_1.46989587005414-3 chr6 52702904 52704204 + 1.46989587005414 NA Intergenic Intergenic -10175 NM_025816 52440 Mm.389757 NM_025816 ENSMUSG00000004535 Tax1bp1 1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151 Tax1 (human T cell leukemia virus type I) binding protein 1 protein-coding common_peak2_55_305_0.25578921851163_8.38528245194847_1.46935580836064 chr19 53478860 53480435 + 1.46935580836064 NA Intergenic Intergenic -14851 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_42_320_-0.280702316868352_8.18607832868813_1.46887450579313 chr15 78834315 78835227 + 1.46887450579313 NA Intergenic Intergenic -7876 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak1_42_320_-0.280702316868352_8.18607832868813_1.46887450579313-2 chr7 44895694 44896617 + 1.46887450579313 NA promoter-TSS (NM_027376) promoter-TSS (NM_027376) 76 NM_027376 70300 Mm.276298 NM_027376 ENSMUSG00000011658 Fuz 2600013E07Rik|b2b1273Clo fuzzy planar cell polarity protein protein-coding common_peak2_186_1737_-0.116294692712376_10.7050650204582_1.46873733903997 chr2 132261609 132264941 + 1.46873733903997 NA 5' UTR (NM_001291040, exon 1 of 4) 5' UTR (NM_001291040, exon 1 of 4) 127 NM_138651 110911 Mm.284503 NM_138651 ENSMUSG00000058793 Cds2 5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 protein-coding common_peak1_19_139_-0.43814878931419_6.91020862228787_1.46826175903504-2 chr4 59268636 59269133 + 1.46826175903504 NA non-coding (NR_105031, exon 4 of 4) non-coding (NR_105031, exon 4 of 4) 8833 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_19_139_-0.43814878931419_6.91020862228787_1.46826175903504-3 chr9 65546741 65547211 + 1.46826175903504 NA Intergenic Intergenic 33111 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_19_139_-0.43814878931419_6.91020862228787_1.46826175903504 chr11 70534565 70535046 + 1.46826175903504 NA Intergenic MTD|LTR|ERVL-MaLR -5467 NM_008876 18806 Mm.260177 NM_008876 ENSMUSG00000020828 Pld2 PLD1C phospholipase D2 protein-coding unique_peak2_19_139_-0.43814878931419_6.91020862228787_1.46826175903504 chr19 4283516 4284635 + 1.46826175903504 NA promoter-TSS (NM_026720) promoter-TSS (NM_026720) -938 NM_026720 68423 Mm.23642 NM_026720 ENSMUSG00000005986 Ankrd13d 0710001P18Rik|AI430801 ankyrin repeat domain 13 family, member D protein-coding common_peak1_17_125_-0.47259456162725_6.74098264268629_1.46801713770938 chr1 53776728 53777094 + 1.46801713770938 NA intron (NM_133810, intron 1 of 7) intron (NM_133810, intron 1 of 7) 8304 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding unique_peak2_17_125_-0.47259456162725_6.74098264268629_1.46801713770938 chr17 84893199 84894230 + 1.46801713770938 NA Intergenic MLTR18_MM|LTR|ERVK -63027 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak1_17_125_-0.47259456162725_6.74098264268629_1.46801713770938-2 chr2 35454082 35454476 + 1.46801713770938 NA intron (NM_001308299, intron 1 of 7) intron (NM_001308299, intron 1 of 7) 7170 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding unique_peak2_17_125_-0.47259456162725_6.74098264268629_1.46801713770938-2 chr8 77492368 77493266 + 1.46801713770938 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -24239 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_330_3419_-0.082388365111191_11.6985864272177_1.46778612469672 chr1 85750294 85753615 + 1.46778612469672 NA promoter-TSS (NR_106172) promoter-TSS (NR_106172) 6 NR_106172 102466882 NR_106172 ENSMUSG00000098634 Mir8096 Gm27479|mmu-mir-8096 microRNA 8096 ncRNA common_peak1_65_519_-0.218435554181218_8.91315003593785_1.46742325302849 chr7 106270292 106271234 + 1.46742325302849 NA Intergenic L1_Mus3|LINE|L1 53765 NR_030720 668128 Mm.484022 NR_030720 Gm8989 EG668128|Gm21911 very large inducible GTPase 1 pseudogene pseudo common_peak2_144_1289_-0.136386448919726_10.2649621258508_1.46741919908795 chr10 19691115 19693809 + 1.46741919908795 NA Intergenic Intergenic -20125 NM_172786 237313 Mm.234667 NM_172786 ENSMUSG00000020007 Il20ra E230031K19 interleukin 20 receptor, alpha protein-coding common_peak1_46_354_-0.268544126966027_8.33740315090903_1.46733842883502 chr10 121475631 121476308 + 1.46733842883502 NA intron (NM_138956, intron 1 of 4) CpG 281 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding common_peak1_18_132_-0.454918232104299_6.82782331944904_1.46719068987925 chr10 79690618 79691041 + 1.46719068987925 NA intron (NR_126325, intron 1 of 3) ID_B1|SINE|B4 1809 NM_008504 16904 Mm.378960 NM_008504 ENSMUSG00000054206 Gzmm Lmet1|MMET-1 granzyme M (lymphocyte met-ase 1) protein-coding common_peak1_18_132_-0.454918232104299_6.82782331944904_1.46719068987925-2 chr13 21530725 21531072 + 1.46719068987925 NA intron (NM_001251833, intron 1 of 3) CpG 216 NM_139141 93681 Mm.290601 NM_139141 ENSMUSG00000063894 Zkscan8 2510038J07Rik|D430019P06Rik|LD5-1|Zfp192 zinc finger with KRAB and SCAN domains 8 protein-coding common_peak1_73_591_-0.203057403231183_9.10792466401336_1.46710235540897 chr6 17693591 17694871 + 1.46710235540897 NA exon (NM_001289626, exon 1 of 15) exon (NM_001289626, exon 1 of 15) 237 NM_001289625 64213 Mm.12051 NM_022332 ENSMUSG00000029534 St7 9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding common_peak2_73_591_-0.203057403231183_9.10792466401336_1.46710235540897 chr13 92483395 92484732 + 1.46710235540897 NA promoter-TSS (NM_001163627) promoter-TSS (NM_001163627) -32 NM_001163627 73942 Mm.85935 NM_001163627 ENSMUSG00000034334 Fam151b 4930405M20Rik family with sequence similarity 151, member B protein-coding common_peak2_97_817_-0.172468484844709_9.5897227905194_1.46709620500065 chr17 26137722 26139748 + 1.46709620500065 NA promoter-TSS (NM_001159598) promoter-TSS (NM_001159598) 49 NM_001159598 12005 Mm.23684 NM_009733 ENSMUSG00000024182 Axin1 AI316800|Axin|Fu|Kb|Ki|fused|kinky|knobbly axin 1 protein-coding common_peak1_32_239_-0.329570647947639_7.7421052716347_1.46696370287478 chr19 24984161 24984853 + 1.46696370287478 NA Intergenic Intergenic -15022 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak1_61_350_0.237967295616102_8.57431086811261_1.46657747776716 chr17 28515262 28516314 + 1.46657747776716 NA Intergenic Intergenic -15073 NM_026290 67645 Mm.46170 NM_026290 ENSMUSG00000024223 Armc12 4930511I11Rik|AV041658 armadillo repeat containing 12 protein-coding common_peak1_241_2049_0.101770961428995_11.0522936751073_1.46653174547631 chr7 142460852 142462766 + 1.46653174547631 NA intron (NM_001271509, intron 1 of 10) intron (NM_001271509, intron 1 of 10) 997 NM_001136071 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding common_peak2_157_1425_-0.129046864144216_10.4132348343718_1.46640019072991 chr10 34417198 34419278 + 1.46640019072991 NA intron (NM_176968, intron 1 of 11) CpG 290 NM_176968 319638 Mm.73467 NM_176968 ENSMUSG00000039480 Nt5dc1 6030401B09Rik|AW987726|Nt5c2l1 5'-nucleotidase domain containing 1 protein-coding common_peak1_62_492_-0.223834676426129_8.83352649816485_1.4663079991886 chr6 30339943 30341059 + 1.4663079991886 NA Intergenic Intergenic -35962 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak1_21_154_-0.416326662580286_7.06796107398409_1.46623026115013 chr15 85036501 85037034 + 1.46623026115013 NA promoter-TSS (NM_133750) promoter-TSS (NM_133750) -295 NM_133750 73225 Mm.247535 NM_133750 ENSMUSG00000022434 Fam118a - family with sequence similarity 118, member A protein-coding common_peak1_21_154_-0.416326662580286_7.06796107398409_1.46623026115013-2 chr6 119377678 119378160 + 1.46623026115013 NA intron (NM_197985, intron 1 of 7) URR1B|DNA|hAT-Charlie 39564 NM_197985 68465 Mm.291826 NM_197985 ENSMUSG00000030168 Adipor2 1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2 adiponectin receptor 2 protein-coding common_peak1_261_2589_-0.0950368095406873_11.2912179778036_1.46605473038534 chr6 129578008 129581489 + 1.46605473038534 NA intron (NM_153590, intron 1 of 6) intron (NM_153590, intron 1 of 6) 1462 NM_153590 243655 Mm.30968 NM_153590 ENSMUSG00000050241 Klre1 Klre-1|NKG2I killer cell lectin-like receptor family E member 1 protein-coding common_peak1_230_2230_-0.102618741317791_11.0721654275852_1.46584227849446 chr6 72615423 72617577 + 1.46584227849446 NA intron (NM_009443, intron 1 of 3) CpG 248 NM_009444 22135 Mm.246563 NM_009444 Tgoln2 TGN38B|TGN41|TGN46|Ttgn2 trans-golgi network protein 2 protein-coding common_peak2_72_435_0.214134701608701_8.87525167558128_1.46540856662742 chr13 99343910 99345175 + 1.46540856662742 NA promoter-TSS (NM_173757) promoter-TSS (NM_173757) 136 NM_026873 68927 Mm.276502 NM_026873 ENSMUSG00000021650 Ptcd2 1190005P08Rik pentatricopeptide repeat domain 2 protein-coding common_peak2_226_1889_0.105774227879296_10.9370576330481_1.46507813303873 chr7 45524760 45527401 + 1.46507813303873 NA promoter-TSS (NM_148927) promoter-TSS (NM_148927) 188 NM_008654 17872 Mm.4048 NM_008654 ENSMUSG00000040435 Ppp1r15a 9630030H21|Gadd34|Myd116 protein phosphatase 1, regulatory (inhibitor) subunit 15A protein-coding common_peak1_58_328_0.243582631306584_8.48373508938853_1.46503339419644 chr17 14992350 14993439 + 1.46503339419644 NA intron (NM_198104, intron 1 of 3) CpG 14030 NM_001123370 100041574 Mm.393767 NM_001123370 ENSMUSG00000036552 9030025P20Rik D17Zt9e RIKEN cDNA 9030025P20 gene protein-coding common_peak1_90_750_-0.180324054794225_9.46250707011716_1.46495605299518 chr4 137608832 137609837 + 1.46495605299518 NA intron (NM_130879, intron 6 of 27) intron (NM_130879, intron 6 of 27) 15145 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak1_40_200_0.310391573886498_7.80624747812218_1.46452749793399 chr11 115054717 115055408 + 1.46452749793399 NA intron (NM_172050, intron 2 of 3) intron (NM_172050, intron 2 of 3) -6767 NM_199201 382551 Mm.424732 NM_199201 ENSMUSG00000069607 Cd300ld3 AY457049|Cd300lh|Clm3|Lmir7|clm-3 CD300 molecule like family member D3 protein-coding common_peak2_40_200_0.310391573886498_7.80624747812218_1.46452749793399 chr17 55711859 55713170 + 1.46452749793399 NA intron (NM_028370, intron 1 of 16) CpG 114 NM_028370 72836 Mm.177073 NM_028370 ENSMUSG00000024174 Pot1b 2810458H16Rik protection of telomeres 1B protein-coding common_peak1_59_466_-0.232009995925601_8.75127374174686_1.46437261044797 chr5 73241144 73242234 + 1.46437261044797 NA intron (NM_028194, intron 1 of 62) intron (NM_028194, intron 1 of 62) 14929 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_204_1659_0.11258132570946_10.753258189089_1.46414343331148 chr11 58329454 58331411 + 1.46414343331148 NA promoter-TSS (NM_001308168) promoter-TSS (NM_001308168) -93 NM_001256520 319475 Mm.72124 NM_178761 ENSMUSG00000049755 Zfp672 4930488P06Rik|4930511N19Rik|Znf672 zinc finger protein 672 protein-coding unique_peak2_11_82_-0.587876274441185_6.08110129412633_1.46410551884986 chr17 12727341 12727901 + 1.46410551884986 NA intron (NM_010515, intron 7 of 47) PB1D7|SINE|Alu -13690 NR_002853 104103 Mm.26553 NR_002853 ENSMUSG00000078247 Airn 2810051F02Rik|2810434M15Rik|AI256653|AI597500|AW049873|Air|B930018I07Rik|D17Ertd663e|IGF2RAS antisense Igf2r RNA ncRNA unique_peak2_11_82_-0.587876274441185_6.08110129412633_1.46410551884986-2 chr5 25100659 25101292 + 1.46410551884986 NA promoter-TSS (NR_027851) promoter-TSS (NR_027851) 0 NR_027851 67261 Mm.461781 NM_026059 ENSMUSG00000043833 2900005J15Rik - RIKEN cDNA 2900005J15 gene ncRNA unique_peak2_11_82_-0.587876274441185_6.08110129412633_1.46410551884986-3 chr6 31132868 31133514 + 1.46410551884986 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -70098 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_11_82_-0.587876274441185_6.08110129412633_1.46410551884986 chr12 21461999 21462395 + 1.46410551884986 NA Intergenic Intergenic -44761 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_22_162_-0.410267350137567_7.14359447916229_1.46355472042527 chr8 123031024 123031534 + 1.46355472042527 NA intron (NR_037865, intron 1 of 13) intron (NR_037865, intron 1 of 13) 11005 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_37_279_-0.302306502361721_7.97812976576411_1.4634885768727-2 chr5 137293748 137295168 + 1.4634885768727 NA promoter-TSS (NM_027356) promoter-TSS (NM_027356) -211 NM_027356 70240 Mm.124666 NM_027356 ENSMUSG00000051502 Ufsp1 2700038N03Rik|D5Ertd655e UFM1-specific peptidase 1 protein-coding common_peak1_37_279_-0.302306502361721_7.97812976576411_1.4634885768727 chr15 80896188 80896908 + 1.4634885768727 NA intron (NM_144812, intron 14 of 24) intron (NM_144812, intron 14 of 24) -43491 NR_039573 100628612 NR_039573 ENSMUSG00000092868 Mir5113 mir-5113|mmu-mir-5113|mu-mir-5113 microRNA 5113 ncRNA common_peak2_37_279_-0.302306502361721_7.97812976576411_1.4634885768727 chr3 19706460 19707754 + 1.4634885768727 NA Intergenic LTR50|LTR|ERVL -11711 NM_205769 12918 Mm.290689 NM_205769 ENSMUSG00000049796 Crh CRF|Gm1347 corticotropin releasing hormone protein-coding common_peak1_89_573_0.1878840220753_9.25884893771334_1.46300200071994 chr13 101691540 101692933 + 1.46300200071994 NA exon (NM_001024955, exon 1 of 10) exon (NM_001024955, exon 1 of 10) 394 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_29_130_0.375233431060253_7.22103971706758_1.46260471315502-2 chr4 70409869 70410969 + 1.46260471315502 NA promoter-TSS (NM_145990) promoter-TSS (NM_145990) 16 NM_001313762 214444 Mm.370777 NM_145990 ENSMUSG00000039298 Cdk5rap2 2900018K03Rik|an|mKIAA1633 CDK5 regulatory subunit associated protein 2 protein-coding unique_peak2_29_130_0.375233431060253_7.22103971706758_1.46260471315502 chr6 54966134 54967324 + 1.46260471315502 NA intron (NM_172729, intron 1 of 11) MLT1A|LTR|ERVL-MaLR 4932 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_29_130_0.375233431060253_7.22103971706758_1.46260471315502 chr2 170116833 170117671 + 1.46260471315502 NA intron (NM_001159683, intron 3 of 6) intron (NM_001159683, intron 3 of 6) 13968 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_85_702_-0.185041397632229_9.36486018025642_1.46256540040842 chr7 78782667 78783811 + 1.46256540040842 NA promoter-TSS (NM_023331) promoter-TSS (NM_023331) 108 NM_026498 67994 Mm.297033 NM_026498 ENSMUSG00000030611 Mrps11 0710005I03Rik|C79873 mitochondrial ribosomal protein S11 protein-coding common_peak1_234_1974_0.103599736352509_10.9994368061281_1.46251160750422 chr13 42051846 42053447 + 1.46251160750422 NA intron (NM_007772, intron 1 of 8) CpG 625 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak2_214_1763_0.10919791157475_10.8392338013449_1.46227413808181 chr12 65073008 65076285 + 1.46227413808181 NA promoter-TSS (NM_013902) promoter-TSS (NM_013902) -708 NM_013902 30795 Mm.28480 NM_013902 ENSMUSG00000020949 Fkbp3 25kDa|FKBP-3|FKBP25 FK506 binding protein 3 protein-coding common_peak2_126_1104_-0.147619960104748_10.0360206742264_1.46225813516584 chr7 3628946 3630713 + 1.46225813516584 NA promoter-TSS (NM_001290381) promoter-TSS (NM_001290381) 100 NM_023524 69714 Mm.358730 NM_023524 ENSMUSG00000006335 Tfpt 2400004F01Rik|AI450389|Amida|FB1 TCF3 (E2A) fusion partner protein-coding common_peak2_246_2414_-0.0984383552514121_11.1885882960974_1.46203607286819 chr11 120579529 120582635 + 1.46203607286819 NA intron (NM_133796, intron 1 of 5) CpG 538 NM_133796 192662 Mm.30016 NM_133796 ENSMUSG00000025132 Arhgdia 5330430M07Rik|Gdi-1|Rho-GDI|RhoDGI|RhoGDI-1 Rho GDP dissociation inhibitor (GDI) alpha protein-coding unique_peak2_20_147_-0.431978721830452_6.99346400471372_1.46176976055104 chr4 116017118 116018245 + 1.46176976055104 NA 5' UTR (NM_010173, exon 1 of 15) 5' UTR (NM_010173, exon 1 of 15) 221 NM_010173 14073 Mm.256025 NM_010173 ENSMUSG00000034171 Faah AW412498 fatty acid amide hydrolase protein-coding common_peak1_174_1355_0.12440983826551_10.4673463822691_1.46102064436496 chr14 27237342 27239024 + 1.46102064436496 NA intron (NM_027871, intron 1 of 10) intron (NM_027871, intron 1 of 10) 173 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_100_666_0.175305242420873_9.46919557239502_1.4600283952457 chr7 101352168 101355493 + 1.4600283952457 NA intron (NM_001040111, intron 1 of 33) B3|SINE|B2 5761 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_117_816_0.157946448082498_9.75316549218693_1.45974509080244 chr12 78861690 78862807 + 1.45974509080244 NA promoter-TSS (NM_023721) promoter-TSS (NM_023721) 176 NM_026114 13665 Mm.196220 NM_026114 ENSMUSG00000021116 Eif2s1 0910001O23Rik|2410026C18Rik|35kDa|Eif2a|eIF2alpha eukaryotic translation initiation factor 2, subunit 1 alpha protein-coding common_peak2_31_231_-0.335115420816048_7.69042328471955_1.45936484953788 chr4 6843465 6844849 + 1.45936484953788 NA intron (NM_145711, intron 1 of 8) intron (NM_145711, intron 1 of 8) 146566 NM_145711 252838 Mm.435828 NM_145711 ENSMUSG00000041272 Tox 1700007F02Rik thymocyte selection-associated high mobility group box protein-coding common_peak1_31_231_-0.335115420816048_7.69042328471955_1.45936484953788 chr18 61726337 61726833 + 1.45936484953788 NA promoter-TSS (NM_021296) promoter-TSS (NM_021296) 195 NR_029432 68982 Mm.441992 NR_029432 ENSMUSG00000098702 1500015A07Rik - RIKEN cDNA 1500015A07 gene ncRNA common_peak2_52_404_-0.246036332328876_8.53875993160755_1.45926830897822 chr6 114659026 114661163 + 1.45926830897822 NA intron (NM_001253718, intron 2 of 19) intron (NM_001253718, intron 2 of 19) 16997 NM_001253717 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding common_peak2_52_404_-0.246036332328876_8.53875993160755_1.45926830897822-2 chr9 37254826 37256274 + 1.45926830897822 NA 5' UTR (NM_020258, exon 1 of 18) 5' UTR (NM_020258, exon 1 of 18) 188 NM_020258 56857 Mm.440037 NM_020258 ENSMUSG00000032122 Slc37a2 G3PP|Slc37a1|cI-2|ci2 solute carrier family 37 (glycerol-3-phosphate transporter), member 2 protein-coding common_peak2_200_1618_0.113790946000439_10.7177827433028_1.4583368096206 chr9 70502435 70504511 + 1.4583368096206 NA 5' UTR (NM_033604, exon 1 of 15) 5' UTR (NM_033604, exon 1 of 15) 252 NM_033604 93836 Mm.29783 NM_033604 ENSMUSG00000032217 Rnf111 ARK|Arkadia ring finger 111 protein-coding common_peak2_362_3816_-0.0775221104268269_11.8594624160021_1.45806961081551 chr1 53780124 53786257 + 1.45806961081551 NA intron (NM_133810, intron 1 of 7) PB1D9|SINE|Alu 2025 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak1_87_721_-0.182832661820507_9.40443869597692_1.45793225252258 chr16 58498797 58499986 + 1.45793225252258 NA intron (NM_018784, intron 2 of 10) intron (NM_018784, intron 2 of 10) 23921 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding common_peak1_74_451_0.209970745874479_8.92516433535243_1.45782543715467 chr3 88509197 88510099 + 1.45782543715467 NA Intergenic MIRc|SINE|MIR -6296 NM_001002011 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_54_298_0.257289344187811_8.35264634629201_1.4566255077309 chr7 58454613 58456507 + 1.4566255077309 NA Intergenic RLTR48A|LTR|ERV1 -202642 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_63_365_0.233778047213837_8.63258886189096_1.45634069247043-2 chr6 103344477 103345578 + 1.45634069247043 NA Intergenic Intergenic -165849 NM_007697 12661 Mm.251288 NM_007697 ENSMUSG00000030077 Chl1 A530023M13Rik|AI465420|CALL|LICAM2 cell adhesion molecule L1-like protein-coding common_peak1_63_365_0.233778047213837_8.63258886189096_1.45634069247043 chr11 106714736 106715824 + 1.45634069247043 NA promoter-TSS (NM_008816) promoter-TSS (NM_008816) 1 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak2_28_124_0.382879029850481_7.15722379958733_1.45540286653305 chr4 127125913 127126606 + 1.45540286653305 NA intron (NM_001099319, intron 1 of 2) CpG 216 NM_001099319 100039968 Mm.392655 NM_001099319 ENSMUSG00000070737 Tmem35b Gm12942|OTTMUSG00000009332|Zmym6nb transmembrane protein 35B protein-coding common_peak1_28_124_0.382879029850481_7.15722379958733_1.45540286653305 chr11 77372317 77372878 + 1.45540286653305 NA intron (NM_001291190, intron 1 of 13) intron (NM_001291190, intron 1 of 13) 24317 NM_001291190 237860 Mm.440381 NM_177710 ENSMUSG00000037926 Ssh2 SSH-2|SSH-2L|mSSH-2L slingshot homolog 2 (Drosophila) protein-coding common_peak2_104_701_0.170253010372258_9.54045372549069_1.45531985632197 chr2 26603146 26605022 + 1.45531985632197 NA exon (NM_026212, exon 1 of 6) exon (NM_026212, exon 1 of 6) 333 NM_026212 67512 Mm.24244 NM_026212 ENSMUSG00000026922 Agpat2 2510002J07Rik|AV000834|BSCL|BSCL1|LPAAB|LPAAT-beta 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) protein-coding common_peak1_86_548_0.192135491660654_9.19673008483553_1.45527578702318 chr14 32201295 32202553 + 1.45527578702318 NA promoter-TSS (NM_011960) promoter-TSS (NM_011960) -33 NM_016897 53600 Mm.303703 NM_016897 ENSMUSG00000013701 Timm23 Tim23 translocase of inner mitochondrial membrane 23 protein-coding common_peak1_57_320_0.248846138576623_8.45085255641061_1.45513515626784 chr9 75402004 75402889 + 1.45513515626784 NA intron (NM_015806, intron 1 of 5) intron (NM_015806, intron 1 of 5) 6913 NM_027418 50772 Mm.480076 NM_015806 ENSMUSG00000042688 Mapk6 2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6 mitogen-activated protein kinase 6 protein-coding common_peak2_61_483_-0.225568721353932_8.80607887659763_1.45472007273686 chr1 155158627 155159603 + 1.45472007273686 NA intron (NM_021433, intron 1 of 7) CpG 412 NM_021433 58244 Mm.66264 NM_021433 ENSMUSG00000026470 Stx6 2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861 syntaxin 6 protein-coding common_peak1_61_483_-0.225568721353932_8.80607887659763_1.45472007273686 chr7 127745539 127746336 + 1.45472007273686 NA promoter-TSS (NM_172748) promoter-TSS (NM_172748) -838 NM_172748 233902 Mm.259353 NM_172748 ENSMUSG00000030811 Fbxl19 6030430O11|BC059812|Fbl19 F-box and leucine-rich repeat protein 19 protein-coding common_peak2_61_483_-0.225568721353932_8.80607887659763_1.45472007273686-2 chr8 69942792 69945161 + 1.45472007273686 NA intron (NM_001286450, intron 2 of 12) intron (NM_001286450, intron 2 of 12) 30407 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding common_peak1_47_248_0.280385847210371_8.10019485567327_1.45416200698086 chr12 80463158 80463893 + 1.45416200698086 NA intron (NM_133798, intron 1 of 8) CpG 430 NM_133798 97827 Mm.206631 NM_133798 ENSMUSG00000032705 Exd2 4930539P14Rik|C85658|Exdl2 exonuclease 3'-5' domain containing 2 protein-coding common_peak1_135_1195_-0.140628479664864_10.1536874343657_1.45388169330847 chr18 77064614 77066124 + 1.45388169330847 NA promoter-TSS (NM_001164168) promoter-TSS (NM_001164168) 161 NM_001164167 17344 Mm.6370 NM_008602 ENSMUSG00000025423 Pias2 6330408K17Rik|AI462206|ARIP3|AU018068|Dib|Miz1|PIASxalpha|PIASxb|PIASxbeta|SIZ2 protein inhibitor of activated STAT 2 protein-coding common_peak2_89_740_-0.180538783554846_9.44306034052841_1.45385733203221 chr4 98922140 98923328 + 1.45385733203221 NA Intergenic Intergenic -1076 NM_001301414 230484 Mm.371692 NM_146144 ENSMUSG00000028560 Usp1 - ubiquitin specific peptidase 1 protein-coding common_peak2_157_1189_0.131965544104366_10.2827286302475_1.45337319794161 chr2 25210193 25212244 + 1.45337319794161 NA exon (NM_021393, exon 1 of 13) exon (NM_021393, exon 1 of 13) 271 NM_021393 58202 Mm.116418 NM_021393 ENSMUSG00000013465 Nelfb A730008L03Rik|AB041607|AI663983|Cobra1|Nelf-b negative elongation factor complex member B protein-coding common_peak1_58_457_-0.233677383055118_8.72236509656938_1.4530879452034-2 chr7 66124255 66125494 + 1.4530879452034 NA intron (NM_001081163, intron 1 of 2) RSINE1|SINE|B4 15359 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_58_457_-0.233677383055118_8.72236509656938_1.4530879452034 chr9 103229640 103231423 + 1.4530879452034 NA promoter-TSS (NM_133977) promoter-TSS (NM_133977) -245 NM_133977 22041 Mm.37214 NM_133977 ENSMUSG00000032554 Trf AI266983|Cd176|HP|Tf|Tfn|hpx transferrin protein-coding common_peak1_58_457_-0.233677383055118_8.72236509656938_1.4530879452034-3 chr7 89252066 89253365 + 1.4530879452034 NA intron (NM_028343, intron 4 of 14) intron (NM_028343, intron 4 of 14) 86072 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding common_peak1_58_457_-0.233677383055118_8.72236509656938_1.4530879452034 chr19 9054281 9055281 + 1.4530879452034 NA intron (NM_001286518, intron 6 of 6) RLTR17B_Mm|LTR|ERVK 33175 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_60_343_0.238254696344875_8.54539210287454_1.45306809809646 chr12 104988103 104989263 + 1.45306809809646 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 9994 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_175_1365_0.123892907962929_10.4776882222716_1.45288385693287 chr12 100984809 100987710 + 1.45288385693287 NA intron (NM_026681, intron 3 of 29) Charlie5|DNA|hAT-Charlie 35509 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak1_34_161_0.341595711638909_7.51064785870408_1.45243871188441 chr1 58806738 58807410 + 1.45243871188441 NA intron (NM_001277926, intron 2 of 9) RSINE1|SINE|B4 4572 NM_001080126 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding unique_peak2_30_223_-0.340672717323297_7.63701856339596_1.45228433585121 chr17 35860721 35862140 + 1.45228433585121 NA exon (NM_134122, exon 1 of 4) exon (NM_134122, exon 1 of 4) 112 NM_134122 106582 Mm.390992 NM_134122 ENSMUSG00000059791 Nrm 2610307M02Rik|AI429796 nurim (nuclear envelope membrane protein) protein-coding common_peak2_117_1013_-0.15370322077516_9.90899032661576_1.45226970360716 chr4 139578561 139581196 + 1.45226970360716 NA intron (NM_001205173, intron 1 of 8) intron (NM_001205173, intron 1 of 8) 5158 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak2_48_370_-0.258399139710118_8.40607580676574_1.4521294003435 chr5 109795422 109796937 + 1.4521294003435 NA Intergenic Intergenic 37963 NR_027964 667213 Mm.454429 NR_027964 ENSMUSG00000105044 Gm10416 EG667213|ENSMUSG00000072761 zinc finger protein pseudogene pseudo common_peak1_48_370_-0.258399139710118_8.40607580676574_1.4521294003435 chr1 91052024 91052911 + 1.4521294003435 NA promoter-TSS (NM_001111311) promoter-TSS (NM_001111311) -977 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_95_624_0.179287710915359_9.37735623500713_1.45208714701223 chr2 28839717 28840977 + 1.45208714701223 NA promoter-TSS (NM_001166033) promoter-TSS (NM_001166033) 13 NM_172977 269252 Mm.26043 NM_172977 ENSMUSG00000035666 Gtf3c4 5330400C03|AI426938|AU014771|AU017413|KAT12|TFIIIC90 general transcription factor IIIC, polypeptide 4 protein-coding common_peak2_95_624_0.179287710915359_9.37735623500713_1.45208714701223 chr18 42274756 42276212 + 1.45208714701223 NA promoter-TSS (NR_033452) promoter-TSS (NR_033452) 131 NM_172626 225432 Mm.329400 NM_172626 ENSMUSG00000024491 Rbm27 A730010I06|AI043120|Psc1|mKIAA1311 RNA binding motif protein 27 protein-coding common_peak1_123_1073_-0.148871450878394_9.99434255254621_1.45170628585026 chr9 106892082 106892960 + 1.45170628585026 NA promoter-TSS (NM_029103) promoter-TSS (NM_029103) -583 NM_029103 74840 Mm.29778 NM_029103 ENSMUSG00000032575 Manf 3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17 mesencephalic astrocyte-derived neurotrophic factor protein-coding common_peak2_155_1170_0.132642711479358_10.2598467162409_1.45142177956404 chr3 60493844 60497357 + 1.45142177956404 NA intron (NM_001253713, intron 2 of 9) MTE2a|LTR|ERVL-MaLR -5579 NM_001253711 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_76_467_0.206356821189662_8.97354313017824_1.45117231057726 chr6 31219971 31220822 + 1.45117231057726 NA promoter-TSS (NR_040262) promoter-TSS (NR_040262) 45 NR_040261 73652 Mm.441297 NR_040257 ENSMUSG00000087380 2210408F21Rik - RIKEN cDNA 2210408F21 gene ncRNA common_peak2_39_194_0.310416225067522_7.76253842628337_1.45085295778444 chrX 48233860 48235069 + 1.45085295778444 NA Intergenic RMER15|LTR|ERVL -22470 NM_028276 72554 Mm.336045 NM_028276 ENSMUSG00000063785 Utp14a 2700066J21Rik|JsdX|NY-CO-16|SDCCAG16|T25628|mKIAA0266 UTP14A small subunit processome component protein-coding common_peak1_91_759_-0.178170181864724_9.48077051739859_1.45029727742107 chr3 97930762 97932270 + 1.45029727742107 NA intron (NM_001033779, intron 1 of 1) intron (NM_001033779, intron 1 of 1) 1343 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding common_peak2_84_693_-0.187150004725769_9.34521685021538_1.44987161488383 chr10 94198292 94199759 + 1.44987161488383 NA promoter-TSS (NM_025551) promoter-TSS (NM_025551) 16 NM_025551 66414 Mm.27886 NM_025551 ENSMUSG00000020022 Ndufa12 2410011G03Rik|AW112974 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 protein-coding common_peak1_27_118_0.391746986709982_7.09069125666293_1.4491088002274 chr18 35702619 35703154 + 1.4491088002274 NA intron (NM_029669, intron 1 of 7) intron (NM_029669, intron 1 of 7) 258 NM_029669 76594 Mm.108596 NM_029669 ENSMUSG00000024350 Dnajc18 2700075B01Rik|AU041129 DnaJ heat shock protein family (Hsp40) member C18 protein-coding common_peak1_27_118_0.391746986709982_7.09069125666293_1.4491088002274-2 chr7 101634486 101635027 + 1.4491088002274 NA Intergenic Intergenic -29012 NM_009191 20480 Mm.3990 NM_009191 ENSMUSG00000001829 Clpb AL118244|Skd3 ClpB caseinolytic peptidase B protein-coding common_peak1_257_2224_0.0968843768524668_11.1680318091674_1.44905495351604 chr11 107458490 107459911 + 1.44905495351604 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 11520 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_102_865_-0.166675330949985_9.67488554925173_1.44893351650532 chr11 43425508 43427105 + 1.44893351650532 NA promoter-TSS (NM_013917) promoter-TSS (NM_013917) -58 NM_001131054 30939 Mm.6856 NM_013917 ENSMUSG00000020415 Pttg1 AW555095|C87862|Pttg|Pttg3 pituitary tumor-transforming gene 1 protein-coding common_peak1_318_2909_0.0852412898447756_11.549424082718_1.44864575507271 chr5 145114199 145117227 + 1.44864575507271 NA intron (NM_023142, intron 1 of 9) (TC)n|Simple_repeat|Simple_repeat 1457 NM_023142 11867 Mm.30010 NM_023142 ENSMUSG00000029622 Arpc1b 41kDa|AA408064|AA408534|AA571392|AF007010|AW208418|L72|SOP2Hs|p41-ARC actin related protein 2/3 complex, subunit 1B protein-coding unique_peak2_8_62_-0.699206872813605_5.62767648709311_1.44840522860438 chr18 56714108 56714614 + 1.44840522860438 NA intron (NM_010721, intron 1 of 10) ORR1B2|LTR|ERVL-MaLR 6548 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak1_66_527_-0.213850419208731_8.93746890975409_1.44838442690714 chr2 155276318 155277238 + 1.44838442690714 NA intron (NR_046364, intron 1 of 2) CpG 414 NR_046364 66734 Mm.196239 NM_025735 ENSMUSG00000027602 Map1lc3a 1010001H21Rik|4922501H04Rik|LC3|LC3a microtubule-associated protein 1 light chain 3 alpha protein-coding common_peak2_66_527_-0.213850419208731_8.93746890975409_1.44838442690714 chr2 30257086 30259491 + 1.44838442690714 NA intron (NM_177725, intron 3 of 3) intron (NM_177725, intron 3 of 3) -7915 NM_001252568 227696 Mm.297949 NM_172267 ENSMUSG00000079484 Phyhd1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding common_peak2_130_934_0.148264707071874_9.94295490831094_1.44834491822171 chr16 97308898 97312074 + 1.44834491822171 NA Intergenic MTD|LTR|ERVL-MaLR -46242 NM_019517 56175 Mm.97885 NM_019517 ENSMUSG00000040605 Bace2 1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP1|ASP21|BAE2|CDA13|CEAP1|DRAP beta-site APP-cleaving enzyme 2 protein-coding common_peak1_233_2263_-0.100967965884381_11.0941742598897_1.44825910105299 chr11 69757539 69759512 + 1.44825910105299 NA 5' UTR (NM_001291068, exon 1 of 29) 5' UTR (NM_001291068, exon 1 of 29) 108 NM_001291068 20020 Mm.16533 NM_009089 ENSMUSG00000005198 Polr2a 220kDa|Rpb1|Rpo2-1 polymerase (RNA) II (DNA directed) polypeptide A protein-coding common_peak2_132_953_0.14605485665685_9.97087288433394_1.44823028256402 chr3 119782186 119783922 + 1.44823028256402 NA intron (NM_001310711, intron 1 of 13) CpG 334 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak2_162_1238_0.128883971780768_10.339402458031_1.44778589847931 chr9 50731336 50734511 + 1.44778589847931 NA intron (NM_001311069, intron 1 of 19) intron (NM_001311069, intron 1 of 19) 4812 NM_001311069 330938 Mm.82598 NM_178118 ENSMUSG00000032064 Dixdc1 4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735 DIX domain containing 1 protein-coding common_peak2_128_916_0.149083762812179_9.91531980500114_1.44750077912793 chr8 119557773 119559529 + 1.44750077912793 NA 5' UTR (NM_001167910, exon 1 of 23) 5' UTR (NM_001167910, exon 1 of 23) 110 NM_001167910 56453 Mm.206934 NM_019709 ENSMUSG00000031835 Mbtps1 0610038M03Rik|AV003995|S1P|SKI-1|Ski1|mKIAA0091 membrane-bound transcription factor peptidase, site 1 protein-coding common_peak1_13_43_0.600520820194273_5.75969202873443_1.44728952217472 chr6 114908928 114909269 + 1.44728952217472 NA intron (NM_177683, intron 1 of 4) intron (NM_177683, intron 1 of 4) 12654 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_106_903_-0.161208543059415_9.73957469088548_1.44700429087422 chr2 77945488 77946534 + 1.44700429087422 NA intron (NM_030560, intron 1 of 20) CpG 345 NM_001290740 80744 Mm.288151 NM_030560 ENSMUSG00000027014 Cwc22 AA684037|AI173004|AL022752|B230213M24|mKIAA1604 CWC22 spliceosome-associated protein protein-coding common_peak1_254_2506_-0.095969916828162_11.2437613224199_1.44694452542573 chr17 27121934 27124896 + 1.44694452542573 NA intron (NM_026063, intron 3 of 3) intron (NM_026063, intron 3 of 3) 10476 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding common_peak2_307_2783_0.0870026672970496_11.4864448294973_1.4465625939189 chr18 35887011 35890642 + 1.4465625939189 NA Intergenic CpG 59008 NM_133687 67393 Mm.94560 NM_133687 ENSMUSG00000046668 Cxxc5 4930415K17Rik CXXC finger 5 protein-coding common_peak1_83_524_0.194525653617726_9.13343643936235_1.44633941745803 chr9 45265846 45267098 + 1.44633941745803 NA TTS (NR_106054) TTS (NR_106054) 235 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak2_90_582_0.18499296951955_9.27984855796027_1.44617846338522 chr17 57030673 57031728 + 1.44617846338522 NA exon (NM_010613, exon 1 of 18) exon (NM_010613, exon 1 of 18) 307 NM_010613 16549 Mm.34296 NM_010613 ENSMUSG00000007670 Khsrp 6330409F21Rik|Fbp2|Fubp2|Ksrp KH-type splicing regulatory protein protein-coding common_peak1_273_2729_-0.0917353680859971_11.3688175517642_1.44580892783138 chr13 5844181 5846712 + 1.44580892783138 NA Intergenic Intergenic 12646 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak2_29_215_-0.346231069565765_7.58177196738059_1.44578298168549 chr5 21342317 21343527 + 1.44578298168549 NA intron (NM_029195, intron 2 of 18) L1_Mus3|LINE|L1 -29751 NM_008013 14190 Mm.292100 NM_008013 ENSMUSG00000039899 Fgl2 AI385601|musfiblp fibrinogen-like protein 2 protein-coding common_peak1_101_675_0.173403652031629_9.487581262298_1.44549277764048 chr16 92057716 92059232 + 1.44549277764048 NA exon (NM_080456, exon 1 of 3) exon (NM_080456, exon 1 of 3) 138 NM_080456 121022 Mm.217354 NM_080456 ENSMUSG00000039680 Mrps6 AW046321 mitochondrial ribosomal protein S6 protein-coding common_peak1_138_1225_-0.13775848289818_10.1908640222417_1.44531229349205 chr2 71388897 71390115 + 1.44531229349205 NA intron (NM_026115, intron 1 of 10) CpG 246 NM_026115 107435 Mm.272472 NM_026115 ENSMUSG00000027018 Hat1 2410071B14Rik|AA536933|Hat-1|KAT1 histone aminotransferase 1 protein-coding common_peak2_50_270_0.265521735773586_8.21490990924066_1.44529055129056 chr11 95040822 95042423 + 1.44529055129056 NA promoter-TSS (NM_133667) promoter-TSS (NM_133667) -251 NM_133667 18604 Mm.29768 NM_133667 ENSMUSG00000038967 Pdk2 - pyruvate dehydrogenase kinase, isoenzyme 2 protein-coding common_peak2_50_270_0.265521735773586_8.21490990924066_1.44529055129056-2 chr2 156881391 156882999 + 1.44529055129056 NA intron (NM_029983, intron 2 of 7) intron (NM_029983, intron 2 of 7) 4883 NM_029983 77799 Mm.29264 NM_029983 ENSMUSG00000027636 Sla2 A930009E21Rik|AI430952|SLAP-2|SLAP2 Src-like-adaptor 2 protein-coding common_peak2_173_1595_-0.120834794370136_10.5798275390373_1.44480147957599 chr7 28765329 28767385 + 1.44480147957599 NA promoter-TSS (NM_001122765) promoter-TSS (NM_001122765) 287 NM_001306222 18036 Mm.220333 NM_010908 ENSMUSG00000030595 Nfkbib I(Kappa)B(beta)|I-kappa-B-beta|IKB-beta|IKappaBbeta|IkB|IkBb|NF-kappa-BIB|ikB-B nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta protein-coding common_peak2_57_447_-0.232079296358679_8.69131527387826_1.44462611994645 chr17 57059360 57061121 + 1.44462611994645 NA promoter-TSS (NM_025877) promoter-TSS (NM_025877) -377 NM_025877 66972 Mm.23720 NM_025877 ENSMUSG00000046329 Slc25a23 2310067G05Rik|SCaMC-3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 protein-coding common_peak1_95_797_-0.173244845757537_9.55362251334358_1.4445696725713 chr19 23686839 23687955 + 1.4445696725713 NA promoter-TSS (NM_028208) promoter-TSS (NM_028208) -3 NM_028208 72351 Mm.474795 NM_028208 ENSMUSG00000074925 Ptar1 1700084D09Rik|2010013L17Rik|4930428J16Rik|AI449677 protein prenyltransferase alpha subunit repeat containing 1 protein-coding common_peak1_81_664_-0.18915495413677_9.28263305332017_1.44433922577415 chr5 104571225 104572106 + 1.44433922577415 NA Intergenic Intergenic 45930 NR_030673 100662 Mm.319836 NR_030673 ENSMUSG00000097392 D930016D06Rik 100041172|1110004B06Rik|AI451450|Gm3179 RIKEN cDNA D930016D06 gene ncRNA common_peak1_187_1747_-0.115133759701868_10.7139225896497_1.44417806065931 chr16 20097274 20098457 + 1.44417806065931 NA intron (NM_029436, intron 1 of 7) CpG 311 NM_029436 75785 Mm.392450 NM_029436 ENSMUSG00000062901 Klhl24 1110046J11Rik|4930429H24Rik|6530402O20Rik|C85082 kelch-like 24 protein-coding common_peak2_153_1382_-0.130251589191072_10.368459646555_1.44409922250798 chr11 44544180 44547268 + 1.44409922250798 NA intron (NM_028862, intron 4 of 10) intron (NM_028862, intron 4 of 10) 26347 NM_001166553 74315 Mm.156771 NM_028862 ENSMUSG00000019189 Rnf145 3732413I11Rik|TMRF1 ring finger protein 145 protein-coding common_peak1_53_291_0.258995319145933_8.31932221845299_1.44397767457697 chr3 86998748 86999663 + 1.44397767457697 NA exon (NM_007639, exon 1 of 6) exon (NM_007639, exon 1 of 6) 135 NM_007639 12479 Mm.1894 NM_007639 ENSMUSG00000028076 Cd1d1 AI747460|CD1.1|Cd1a|Cd1d|Ly-38 CD1d1 antigen protein-coding common_peak2_327_3380_-0.0819541022688828_11.6822572497589_1.44393059861088 chr13 95959391 95962694 + 1.44393059861088 NA 3' UTR (NM_029210, exon 13 of 13) 3' UTR (NM_029210, exon 13 of 13) -69120 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding common_peak2_26_112_0.402028604424407_7.02119326462739_1.44385898116082-2 chr19 46682066 46682974 + 1.44385898116082 NA Intergenic Intergenic -7386 NM_025563 66439 Mm.87163 NM_025563 ENSMUSG00000062376 Borcs7 2010012O05Rik|4930569L17Rik|AI413851|AI467257 BLOC-1 related complex subunit 7 protein-coding common_peak2_26_112_0.402028604424407_7.02119326462739_1.44385898116082-3 chr3 37476480 37477260 + 1.44385898116082 NA intron (NM_001310473, intron 14 of 16) intron (NM_001310473, intron 14 of 16) 56920 NM_021343 57815 Mm.172679 NM_021343 ENSMUSG00000027722 Spata5 2510048F20Rik|C78064|Spaf spermatogenesis associated 5 protein-coding common_peak2_26_112_0.402028604424407_7.02119326462739_1.44385898116082 chr1 74200690 74201686 + 1.44385898116082 NA Intergenic L1MA9|LINE|L1 5432 NR_035449 100316687 NR_035449 ENSMUSG00000087820 Mir1928 mmu-mir-1928 microRNA 1928 ncRNA common_peak2_190_1517_0.116415430571328_10.6261637907011_1.44378992718477 chr8 86623123 86625491 + 1.44378992718477 NA exon (NM_025827, exon 1 of 15) exon (NM_025827, exon 1 of 15) 264 NM_025827 66887 Mm.324550 NM_025827 ENSMUSG00000047866 Lonp2 1300002A08Rik|AU015403|Lonp lon peptidase 2, peroxisomal protein-coding common_peak1_145_1075_0.137468975015363_10.1401968500643_1.44353924808392 chr9 61373542 61374863 + 1.44353924808392 NA intron (NM_009389, intron 2 of 19) CpG-15054 1836 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak2_260_2576_-0.0945444750404825_11.2842045843394_1.44327722577396 chr5 93204780 93207502 + 1.44327722577396 NA promoter-TSS (NM_029363) promoter-TSS (NM_029363) 354 NM_017367 12453 Mm.250419 NM_017367 ENSMUSG00000063015 Ccni - cyclin I protein-coding common_peak2_167_1287_0.126394699242949_10.3941142277361_1.44325932894447 chr11 120547769 120550505 + 1.44325932894447 NA TTS (NM_026814) TTS (NM_026814) 590 NM_001033231 192173 Mm.262300 NM_001033231 ENSMUSG00000061111 Fam195b Mcrip1 family with sequence similarity 195, member B protein-coding common_peak1_60_474_-0.227264252171338_8.77815157713264_1.4431782736763 chr11 121672509 121673400 + 1.4431782736763 NA intron (NM_178664, intron 1 of 12) CpG 197 NM_178664 210004 Mm.386847 NM_178664 ENSMUSG00000046605 B3gntl1 6030413G23Rik UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding common_peak2_60_474_-0.227264252171338_8.77815157713264_1.4431782736763 chr16 58542637 58544587 + 1.4431782736763 NA Intergenic RLTR28|LTR|ERVL -20300 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding common_peak2_38_187_0.318354597930223_7.71376615064275_1.44278687968259 chr2 29698390 29699518 + 1.44278687968259 NA intron (NM_054050, intron 5 of 23) intron (NM_054050, intron 5 of 23) -62574 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak2_76_618_-0.197074058441197_9.17525856999367_1.44276110858419 chr12 113013604 113015198 + 1.44276110858419 NA promoter-TSS (NM_001081170) promoter-TSS (NM_001081170) -107 NM_001291445 217893 Mm.35754 NM_198165 ENSMUSG00000021143 Pacs2 6720425G15Rik|AW208651|AW489976|E230011J22|Pacs1l|mKIAA0602 phosphofurin acidic cluster sorting protein 2 protein-coding common_peak1_76_618_-0.197074058441197_9.17525856999367_1.44276110858419 chr17 47595689 47596926 + 1.44276110858419 NA intron (NM_007632, intron 2 of 4) intron (NM_007632, intron 2 of 4) 2840 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_76_618_-0.197074058441197_9.17525856999367_1.44276110858419-2 chr4 43045840 43047066 + 1.44276110858419 NA promoter-TSS (NM_172691) promoter-TSS (NM_172691) -233 NM_172691 230088 Mm.260162 NM_172691 ENSMUSG00000036002 Fam214b B230312A22Rik family with sequence similarity 214, member B protein-coding unique_peak2_12_89_-0.563044162875098_6.21033101489213_1.44267101396302-4 chrX 77432922 77433481 + 1.44267101396302 NA intron (NR_035475, intron 1 of 3) C-rich|Low_complexity|Low_complexity 42735 NR_035475 100316834 NR_035475 ENSMUSG00000088980 Mir669m-2 mmu-mir-669m-2 microRNA 669m-2 ncRNA unique_peak2_12_89_-0.563044162875098_6.21033101489213_1.44267101396302-2 chr9 79947693 79948278 + 1.44267101396302 NA intron (NM_001081243, intron 1 of 5) A-rich|Low_complexity|Low_complexity 29897 NM_001081243 70598 Mm.23049 NM_001081243 ENSMUSG00000034898 Filip1 5730485H21Rik|AI843021 filamin A interacting protein 1 protein-coding unique_peak2_12_89_-0.563044162875098_6.21033101489213_1.44267101396302 chr4 59728173 59729088 + 1.44267101396302 NA intron (NM_001015681, intron 2 of 3) intron (NM_001015681, intron 2 of 3) 55225 NM_001013577 66209 Mm.51988 NM_001013577 ENSMUSG00000038544 Inip 1110054O05Rik|2610312O17Rik|AA399876|Ssbip1 INTS3 and NABP interacting protein protein-coding unique_peak2_12_89_-0.563044162875098_6.21033101489213_1.44267101396302-3 chrX 11839713 11840348 + 1.44267101396302 NA Intergenic Intergenic 240523 NM_175045 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_132_1164_-0.142213926879283_10.115007276102_1.44238379149858 chr11 101645623 101646592 + 1.44238379149858 NA Intergenic CpG 18158 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding common_peak1_247_2424_-0.0972498936684776_11.1951440851276_1.44224978515376 chr18 35562160 35563491 + 1.44224978515376 NA intron (NM_010771, intron 1 of 14) CpG 667 NM_010771 17184 Mm.215034 NM_010771 ENSMUSG00000037236 Matr3 1110061A14Rik|2810017I02Rik|AI841759|AW555618|D030046F20Rik|mKIAA0723 matrin 3 protein-coding common_peak2_165_1267_0.127779150215297_10.3722286052471_1.4415113822948 chr16 11500118 11502714 + 1.4415113822948 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 95768 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak1_181_1426_0.12018773443064_10.5388634866911_1.44107813853542 chr1 152766394 152767756 + 1.44107813853542 NA intron (NM_026369, intron 1 of 3) CpG 533 NM_026369 67771 Mm.288974 NM_026369 ENSMUSG00000008475 Arpc5 5830443F10Rik|p16-Arc actin related protein 2/3 complex, subunit 5 protein-coding common_peak1_205_1670_0.111664176901909_10.7623281065121_1.44016799237768 chr16 58522385 58524074 + 1.44016799237768 NA promoter-TSS (NM_018784) promoter-TSS (NM_018784) 83 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding common_peak1_28_207_-0.351776403628524_7.52455151632683_1.43993151397604 chr14 55724064 55724617 + 1.43993151397604 NA Intergenic Intergenic -2164 NM_019519 56187 Mm.87216 NM_019519 ENSMUSG00000040472 Rabggta gm Rab geranylgeranyl transferase, a subunit protein-coding common_peak1_286_2546_0.0903961300567016_11.3597813093025_1.4392391600198 chr6 8509352 8511665 + 1.4392391600198 NA intron (NM_133236, intron 1 of 7) intron (NM_133236, intron 1 of 7) 908 NM_133236 170772 Mm.210787 NM_133236 ENSMUSG00000029638 Glcci1 2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1 glucocorticoid induced transcript 1 protein-coding common_peak1_90_749_-0.178401742663196_9.46154591405164_1.43914289978206 chr18 56974351 56975788 + 1.43914289978206 NA intron (NM_029909, intron 1 of 4) intron (NM_029909, intron 1 of 4) 310 NM_029909 77422 Mm.256874 NM_029909 ENSMUSG00000024592 C330018D20Rik AU018666 RIKEN cDNA C330018D20 gene protein-coding unique_peak2_34_254_-0.312907722335324_7.8378995756912_1.43908088172245 chr18 70571180 70573265 + 1.43908088172245 NA intron (NM_010773, intron 1 of 6) intron (NM_010773, intron 1 of 6) 3930 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak2_34_254_-0.312907722335324_7.8378995756912_1.43908088172245 chr12 110750481 110751736 + 1.43908088172245 NA intron (NM_027149, intron 1 of 2) B1_Mus1|SINE|Alu 13159 NM_027149 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding common_peak2_34_254_-0.312907722335324_7.8378995756912_1.43908088172245-2 chr5 30921451 30922225 + 1.43908088172245 NA TTS (NM_133918) TTS (NM_133918) 279 NM_001310524 16548 Mm.22451 NM_008439 ENSMUSG00000029162 Khk - ketohexokinase protein-coding unique_peak2_42_214_0.29753432066449_7.89696000992171_1.43881753281619 chr10 80671841 80673636 + 1.43881753281619 NA intron (NM_021462, intron 2 of 13) MIRc|SINE|MIR 3555 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak2_42_214_0.29753432066449_7.89696000992171_1.43881753281619 chr19 10841765 10842737 + 1.43881753281619 NA promoter-TSS (NM_023044) promoter-TSS (NM_023044) -293 NM_023044 65221 Mm.27387 NM_023044 ENSMUSG00000024737 Slc15a3 Ci1|cI-1 solute carrier family 15, member 3 protein-coding common_peak1_42_214_0.29753432066449_7.89696000992171_1.43881753281619 chr7 122387850 122388765 + 1.43881753281619 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 99182 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak2_291_2943_-0.0880183072986718_11.4795528024077_1.43878483375137 chr1 36805415 36809169 + 1.43878483375137 NA intron (NM_018872, intron 31 of 40) intron (NM_018872, intron 31 of 40) 28308 NM_001289612 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak2_46_242_0.278318583820236_8.0639717955159_1.4387595273829 chr6 121183470 121184894 + 1.4387595273829 NA non-coding (NR_130903, exon 1 of 7) non-coding (NR_130903, exon 1 of 7) 515 NM_001304773 74043 Mm.491240 NM_028730 ENSMUSG00000067825 Pex26 4632428M11Rik peroxisomal biogenesis factor 26 protein-coding common_peak1_39_295_-0.291706826811817_8.06359995222304_1.4387595273829 chr9 121674407 121675204 + 1.4387595273829 NA Intergenic B3A|SINE|B2 30224 NM_001164562 215474 Mm.31421 NM_178677 ENSMUSG00000061536 Sec22c 4932412K21|5930407I15Rik|C530046H07|Sec22l3 SEC22 homolog C, vesicle trafficking protein protein-coding common_peak2_167_1530_-0.122946990142221_10.5187850724287_1.43858084498932 chr7 46795006 46796955 + 1.43858084498932 NA promoter-TSS (NM_008186) promoter-TSS (NM_008186) -99 NM_001005247 246694 Mm.379442 NM_178742 ENSMUSG00000014418 Hps5 AI646796|AL022647|C85120|haze|hz|maroon|mr|ru-2|ru2 Hermansky-Pudlak syndrome 5 protein-coding common_peak2_43_328_-0.275533719854934_8.22417691380777_1.43763979859932 chr6 108922132 108923690 + 1.43763979859932 NA Intergenic MLT1E2|LTR|ERVL-MaLR 94270 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding common_peak1_43_328_-0.275533719854934_8.22417691380777_1.43763979859932 chr10 44821896 44822705 + 1.43763979859932 NA Intergenic Intergenic -244914 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak1_129_926_0.147101302893722_9.92997618007239_1.4357496281158 chr5 124551893 124553934 + 1.4357496281158 NA promoter-TSS (NM_026409) promoter-TSS (NM_026409) 49 NM_026409 67848 Mm.281601 NM_026409 ENSMUSG00000029389 Ddx55 2810021H22Rik|mKIAA1595 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 protein-coding common_peak2_220_2114_-0.103900771958306_10.9944915620282_1.43520392581755 chr9 56263252 56267411 + 1.43520392581755 NA intron (NM_172924, intron 3 of 6) AT_rich|Low_complexity|Low_complexity -104261 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak2_159_1209_0.130179829027888_10.3058812466759_1.43516329101601 chr15 5115565 5118045 + 1.43516329101601 NA intron (NM_026069, intron 1 of 3) CpG 192 NM_026069 67281 Mm.10474 NM_026069 ENSMUSG00000041841 Rpl37 3110005M08Rik ribosomal protein L37 protein-coding unique_peak2_27_199_-0.357291439756799_7.46521046989633_1.43481267064655 chrX 15365176 15366423 + 1.43481267064655 NA Intergenic Intergenic -254310 NR_033171 67395 Mm.50369 NM_026128 ENSMUSG00000045217 Ppp1r2-ps9 4930403L05Rik protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 9 pseudo common_peak2_67_397_0.220136262803234_8.74669275194527_1.43431702317663 chr2 156277259 156279420 + 1.43431702317663 NA intron (NM_172674, intron 9 of 17) intron (NM_172674, intron 9 of 17) -34134 NM_027585 70873 Mm.475234 NM_027585 ENSMUSG00000038085 Cnbd2 4921517L17Rik|5430421B09Rik|Cris cyclic nucleotide binding domain containing 2 protein-coding common_peak2_135_1194_-0.13942170833487_10.1530840487007_1.43350514929611 chr8 123948536 123950459 + 1.43350514929611 NA promoter-TSS (NM_172288) promoter-TSS (NM_172288) -232 NM_172288 234865 Mm.267812 NM_172288 ENSMUSG00000039509 Nup133 mermaid nucleoporin 133 protein-coding common_peak2_109_932_-0.157829941279488_9.78681830021202_1.43350370547913 chr4 108619223 108620862 + 1.43350370547913 NA promoter-TSS (NM_177045) promoter-TSS (NM_177045) 86 NM_177045 319965 Mm.151129 NM_177045 ENSMUSG00000028582 Cc2d1b A830039B04Rik|Freud2 coiled-coil and C2 domain containing 1B protein-coding common_peak1_100_667_0.173143901131406_9.47027624303976_1.43272311604255 chr4 32656614 32657628 + 1.43272311604255 NA promoter-TSS (NM_001081392) promoter-TSS (NM_001081392) 2 NM_001081392 100019 Mm.24627 NM_133874 ENSMUSG00000058006 Mdn1 4833432B22Rik|A130070M06|AA958993|D4Abb1e|Gm135 midasin AAA ATPase 1 protein-coding common_peak2_221_1838_0.105824714139114_10.8976181214815_1.43230761189898 chr14 60250320 60252667 + 1.43230761189898 NA promoter-TSS (NM_170591) promoter-TSS (NM_170591) -115 NM_170591 71844 Mm.258051 NM_170591 ENSMUSG00000063895 Nupl1 1700017F11Rik|Nup58|mKIAA0410 nucleoporin like 1 protein-coding common_peak2_75_608_-0.196709592136729_9.15194362183797_1.43224022292631 chr2 155275748 155277547 + 1.43224022292631 NA intron (NR_046364, intron 1 of 2) CpG 283 NR_046364 66734 Mm.196239 NM_025735 ENSMUSG00000027602 Map1lc3a 1010001H21Rik|4922501H04Rik|LC3|LC3a microtubule-associated protein 1 light chain 3 alpha protein-coding common_peak1_75_608_-0.196709592136729_9.15194362183797_1.43224022292631 chr11 59191134 59192211 + 1.43224022292631 NA intron (NM_008193, intron 1 of 7) CpG 280 NM_008193 14923 Mm.3624 NM_008193 ENSMUSG00000020444 Guk1 AA409738|AL033299|AL033300|AV026611|Gmk|Guk-1 guanylate kinase 1 protein-coding common_peak2_59_465_-0.22891740087022_8.74972744421917_1.43168533061019 chr16 59471582 59472707 + 1.43168533061019 NA intron (NM_025910, intron 1 of 9) intron (NM_025910, intron 1 of 9) 369 NM_025910 67014 Mm.289150 NM_025910 ENSMUSG00000022724 Mina 1810047J07Rik|2410057H13Rik|3830408E23Rik|AI449204 myc induced nuclear antigen protein-coding common_peak1_59_465_-0.22891740087022_8.74972744421917_1.43168533061019 chr4 88003324 88004309 + 1.43168533061019 NA intron (NM_027326, intron 2 of 10) intron (NM_027326, intron 2 of 10) 29591 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak1_336_3490_-0.0802418264091234_11.7293037283482_1.431158442966 chr19 61266078 61267373 + 1.431158442966 NA Intergenic CpG -38307 NM_009970 12982 Mm.287228 NM_009970 ENSMUSG00000059326 Csf2ra CD116|Csfgmra|GM-CSF-Ra|GM-CSFR colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) protein-coding common_peak2_142_1047_0.138767345044977_10.1028066740599_1.43101588786468 chr10 80248380 80250295 + 1.43101588786468 NA promoter-TSS (NM_029272) promoter-TSS (NM_029272) -115 NM_029272 75406 Mm.28712 NM_029272 ENSMUSG00000020153 Ndufs7 1010001M04Rik NADH dehydrogenase (ubiquinone) Fe-S protein 7 protein-coding common_peak2_77_476_0.201710304788707_8.99870060839987_1.43094012273231 chr11 95747709 95750320 + 1.43094012273231 NA promoter-TSS (NM_201609) promoter-TSS (NM_201609) -53 NM_201609 268469 Mm.389038 NM_201609 ENSMUSG00000075595 Zfp652 9530033F24Rik|ZNF652 zinc finger protein 652 protein-coding common_peak1_77_476_0.201710304788707_8.99870060839987_1.43094012273231 chr1 161130620 161131678 + 1.43094012273231 NA intron (NM_001039482, intron 1 of 11) intron (NM_001039482, intron 1 of 11) 330 NM_001039482 226541 Mm.255165 NM_144876 ENSMUSG00000026705 Klhl20 AI504637|D930050H05Rik|Kleip|mKIAA4210 kelch-like 20 protein-coding common_peak1_14_48_0.56733427729614_5.89837698276328_1.43077784553669 chr11 115226907 115227285 + 1.43077784553669 NA intron (NM_001033393, intron 8 of 9) intron (NM_001033393, intron 8 of 9) 39609 NM_001033393 320534 Mm.260587 NM_001033393 ENSMUSG00000045980 Tmem104 C630005D06Rik|mFLJ00021 transmembrane protein 104 protein-coding common_peak1_14_48_0.56733427729614_5.89837698276328_1.43077784553669-2 chr13 44580712 44581006 + 1.43077784553669 NA Intergenic Intergenic 141132 NR_045489 69491 Mm.392410 NR_045489 ENSMUSG00000098144 1700029N11Rik - RIKEN cDNA 1700029N11 gene ncRNA common_peak1_14_48_0.56733427729614_5.89837698276328_1.43077784553669-3 chr3 88511563 88511968 + 1.43077784553669 NA Intergenic Intergenic -8413 NM_001002011 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_234_1976_0.102139518575129_11.0001669150168_1.43077384235953 chr16 35982800 35984967 + 1.43077384235953 NA intron (NM_008465, intron 1 of 13) CpG 520 NM_008465 16646 Mm.3991 NM_008465 ENSMUSG00000022905 Kpna1 AW494490|IPOA5|NPI1|Rch2|mSRP1 karyopherin (importin) alpha 1 protein-coding common_peak1_64_374_0.226167734949653_8.66383065285807_1.43070651177437 chr1 37473776 37474888 + 1.43070651177437 NA intron (NM_001290801, intron 4 of 14) intron (NM_001290801, intron 4 of 14) 14273 NR_024017 77633 Mm.483177 NR_024017 ENSMUSG00000103948 4930594C11Rik - G1 to S phase transition pseudogene pseudo common_peak2_64_374_0.226167734949653_8.66383065285807_1.43070651177437 chr2 158166146 158167769 + 1.43070651177437 NA Intergenic Intergenic -20565 NM_009373 21817 Mm.330731 NM_009373 ENSMUSG00000037820 Tgm2 G[a]h|TG2|TGase2|tTG|tTGas transglutaminase 2, C polypeptide protein-coding common_peak1_25_107_0.400533742477464_6.9551543734022_1.43064431347115-6 chr7 142094663 142095243 + 1.43064431347115 NA 5' UTR (NM_008748, exon 1 of 7) 5' UTR (NM_008748, exon 1 of 7) 331 NM_008748 18218 Mm.39725 NM_008748 ENSMUSG00000037887 Dusp8 5530400B01Rik|AI593498|Nttp1 dual specificity phosphatase 8 protein-coding common_peak1_25_107_0.400533742477464_6.9551543734022_1.43064431347115-3 chr15 27676116 27676609 + 1.43064431347115 NA intron (NM_001242424, intron 1 of 8) intron (NM_001242424, intron 1 of 8) 5180 NM_001242424 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_25_107_0.400533742477464_6.9551543734022_1.43064431347115-2 chr11 32570924 32571522 + 1.43064431347115 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 37957 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_25_107_0.400533742477464_6.9551543734022_1.43064431347115-4 chr16 30024780 30025449 + 1.43064431347115 NA intron (NR_045878, intron 3 of 3) intron (NR_045878, intron 3 of 3) 14365 NR_045878 71528 Mm.297640 NR_045878 9030404E10Rik - RIKEN cDNA 9030404E10 gene ncRNA common_peak1_25_107_0.400533742477464_6.9551543734022_1.43064431347115-5 chr7 126376749 126377294 + 1.43064431347115 NA exon (NM_023712, exon 1 of 12) exon (NM_023712, exon 1 of 12) 913 NM_023712 73658 Mm.11112 NM_023712 ENSMUSG00000030741 Spns1 2210013K02Rik|Spin1|Spinl spinster homolog 1 protein-coding common_peak1_25_107_0.400533742477464_6.9551543734022_1.43064431347115 chr11 11728913 11729490 + 1.43064431347115 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 39024 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding unique_peak2_25_107_0.400533742477464_6.9551543734022_1.43064431347115 chr15 25891235 25892298 + 1.43064431347115 NA intron (NM_001034851, intron 2 of 8) ID_B1|SINE|B4 -41786 NM_001277318 66270 Mm.25311 NM_025459 ENSMUSG00000022270 Fam134b 1810015C04Rik|AU015349 family with sequence similarity 134, member B protein-coding common_peak2_115_992_-0.153761970643092_9.87876892220683_1.4306000753704 chr5 54044148 54047064 + 1.4306000753704 NA intron (NM_001081103, intron 1 of 11) intron (NM_001081103, intron 1 of 11) 47083 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak1_32_149_0.348501257164999_7.40306931907838_1.43052386479558 chr15 64031694 64032304 + 1.43052386479558 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 28449 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_32_149_0.348501257164999_7.40306931907838_1.43052386479558-2 chr3 87910306 87911261 + 1.43052386479558 NA intron (NM_008231, intron 1 of 5) intron (NM_008231, intron 1 of 5) 4462 NM_008231 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding common_peak2_32_149_0.348501257164999_7.40306931907838_1.43052386479558 chr18 65189409 65190617 + 1.43052386479558 NA intron (NM_031881, intron 18 of 29) intron (NM_031881, intron 18 of 29) -58848 NR_029600 387231 NR_029600 ENSMUSG00000065402 Mir122 Mir122a|Mirn122a|mir-122|mmu-mir-122 microRNA 122 ncRNA common_peak1_26_191_-0.362754933881561_7.40358503378038_1.43052386479558 chr10 21251753 21252407 + 1.43052386479558 NA Intergenic Intergenic -43899 NM_001042593 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak1_26_191_-0.362754933881561_7.40358503378038_1.43052386479558-2 chr8 13663286 13663756 + 1.43052386479558 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 14066 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_33_246_-0.318218659424151_7.7892579018726_1.43005335879478 chr17 78834737 78835471 + 1.43005335879478 NA promoter-TSS (NM_181649) promoter-TSS (NM_181649) 277 NM_001081179 320473 Mm.46309 NM_028084 ENSMUSG00000039414 Heatr5b 2010013B10Rik|A230048G03Rik|AV071430|D330050P16Rik|mKIAA1414 HEAT repeat containing 5B protein-coding common_peak2_33_246_-0.318218659424151_7.7892579018726_1.43005335879478-2 chr2 71786446 71787847 + 1.43005335879478 NA exon (NM_008397, exon 1 of 26) exon (NM_008397, exon 1 of 26) 207 NM_001277970 16403 Mm.225096 NM_008397 ENSMUSG00000027111 Itga6 5033401O05Rik|AI115430|Cd49f|VLA-6 integrin alpha 6 protein-coding common_peak2_33_246_-0.318218659424151_7.7892579018726_1.43005335879478 chr2 35993761 35994421 + 1.43005335879478 NA Intergenic Intergenic -14467 NM_029774 74410 Mm.21591 NM_028921 ENSMUSG00000026885 Ttll11 4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e tubulin tyrosine ligase-like family, member 11 protein-coding common_peak1_46_353_-0.264474462656979_8.33536831875451_1.42982909723892 chrX 48429778 48430731 + 1.42982909723892 NA intron (NM_019680, intron 1 of 8) B1F|SINE|Alu 32878 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak2_46_353_-0.264474462656979_8.33536831875451_1.42982909723892 chrX 163908172 163908981 + 1.42982909723892 NA promoter-TSS (NM_026887) promoter-TSS (NM_026887) -441 NM_001290378 108012 Mm.426783 NM_026887 ENSMUSG00000031367 Ap1s2 1500012A13Rik|AI853648|EST1 adaptor-related protein complex 1, sigma 2 subunit protein-coding common_peak1_37_181_0.31918187438455_7.66738557739097_1.42961332005875 chr16 5203422 5204013 + 1.42961332005875 NA non-coding (NR_027804, exon 1 of 9) non-coding (NR_027804, exon 1 of 9) 295 NM_013796 27426 Mm.215641 NM_013796 ENSMUSG00000023143 Nagpa AI596180|UCE N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase protein-coding common_peak1_37_181_0.31918187438455_7.66738557739097_1.42961332005875-2 chr8 124256952 124257554 + 1.42961332005875 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 25859 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_343_3201_0.0808065112967604_11.6851608481646_1.42944075551994 chr5 115489159 115490598 + 1.42944075551994 NA Intergenic PB1D7|SINE|Alu -5394 NM_133760 75387 Mm.332616 NM_133760 ENSMUSG00000029524 Sirt4 4930596O17Rik sirtuin 4 protein-coding common_peak1_42_319_-0.276200924633411_8.18382763257066_1.42941463213599 chr1 167284511 167285282 + 1.42941463213599 NA 5' UTR (NM_030724, exon 1 of 7) 5' UTR (NM_030724, exon 1 of 7) 231 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak1_349_3272_0.0797657255434476_11.7162807498165_1.42930201780245 chr15 78876350 78878531 + 1.42930201780245 NA 5' UTR (NM_145929, exon 1 of 17) 5' UTR (NM_145929, exon 1 of 17) 250 NM_145929 106039 Mm.251331 NM_145929 ENSMUSG00000033128 Gga1 4930406E12Rik|AU016030|AW209092 golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding common_peak2_98_825_-0.168543507605282_9.60572621761681_1.42915157908575 chr14 57885352 57887599 + 1.42915157908575 NA intron (NM_029492, intron 1 of 12) A-rich|Low_complexity|Low_complexity 3787 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|ENSMUSG00000055956|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak1_84_533_0.190945916164937_9.15616888977002_1.42827546551882 chr7 90344804 90346231 + 1.42827546551882 NA intron (NM_001289583, intron 1 of 19) intron (NM_001289583, intron 1 of 19) -41464 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_69_412_0.218060054290444_8.79902799856467_1.42778297036685 chr1 85844896 85846101 + 1.42778297036685 NA intron (NM_133781, intron 6 of 8) intron (NM_133781, intron 6 of 8) -49012 NM_022417 64294 Mm.29870 NM_022417 ENSMUSG00000026223 Itm2c 3110038L02Rik|BRI3|Bricd2c|E25|E25C|ITM3 integral membrane protein 2C protein-coding unique_peak2_24_101_0.413589850164889_6.87922026705394_1.42753125402935-2 chr9 82829448 82830374 + 1.42753125402935 NA 5' UTR (NM_022986, exon 1 of 4) 5' UTR (NM_022986, exon 1 of 4) 105 NM_022986 65099 Mm.41415 NM_022986 ENSMUSG00000032251 Irak1bp1 4921528N06Rik|AI851240|Aabp3|Aip70|Simpl interleukin-1 receptor-associated kinase 1 binding protein 1 protein-coding common_peak1_24_101_0.413589850164889_6.87922026705394_1.42753125402935-2 chr10 44455504 44456014 + 1.42753125402935 NA intron (NM_007548, intron 2 of 6) intron (NM_007548, intron 2 of 6) 2989 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding unique_peak2_24_101_0.413589850164889_6.87922026705394_1.42753125402935 chr2 6477739 6478428 + 1.42753125402935 NA Intergenic Intergenic 125347 NM_181399 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding common_peak1_24_101_0.413589850164889_6.87922026705394_1.42753125402935 chr1 127314592 127315193 + 1.42753125402935 NA intron (NM_145128, intron 3 of 17) intron (NM_145128, intron 3 of 17) 109906 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_24_101_0.413589850164889_6.87922026705394_1.42753125402935-3 chr3 31056946 31057555 + 1.42753125402935 NA Intergenic Intergenic 18284 NR_105975 102465610 NR_105975 ENSMUSG00000098890 Mir7008 Gm27752|mmu-mir-7008 microRNA 7008 ncRNA unique_peak2_13_96_-0.539960403355558_6.32993264050935_1.42738992380167-2 chr13 51945855 51946814 + 1.42738992380167 NA Intergenic Intergenic 99659 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding unique_peak2_13_96_-0.539960403355558_6.32993264050935_1.42738992380167-4 chr5 109553000 109553969 + 1.42738992380167 NA Intergenic Intergenic 5509 NM_016715 57914 Mm.35771 NM_016715 ENSMUSG00000033467 Crlf2 CRLM2|Ly114|Tpte2|Tslpr cytokine receptor-like factor 2 protein-coding common_peak1_13_96_-0.539960403355558_6.32993264050935_1.42738992380167 chr2 150750558 150750898 + 1.42738992380167 NA intron (NM_172117, intron 1 of 13) intron (NM_172117, intron 1 of 13) 1647 NM_172117 12497 Mm.275524 NM_172117 ENSMUSG00000033068 Entpd6 2700026H11Rik|Cd39l2|NTPDase-6 ectonucleoside triphosphate diphosphohydrolase 6 protein-coding unique_peak2_13_96_-0.539960403355558_6.32993264050935_1.42738992380167-3 chr15 5106464 5107277 + 1.42738992380167 NA intron (NM_001163138, intron 2 of 3) intron (NM_001163138, intron 2 of 3) 1663 NM_001163138 239319 Mm.31252 NM_001163138 ENSMUSG00000041849 Card6 D730008L15 caspase recruitment domain family, member 6 protein-coding unique_peak2_13_96_-0.539960403355558_6.32993264050935_1.42738992380167-5 chr6 99429295 99429918 + 1.42738992380167 NA intron (NM_053202, intron 1 of 18) B4|SINE|B4 5739 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_13_96_-0.539960403355558_6.32993264050935_1.42738992380167 chr10 82780413 82781056 + 1.42738992380167 NA Intergenic ORR1B1|LTR|ERVL-MaLR -16593 NM_010914 18045 Mm.245998 NM_010914 ENSMUSG00000020248 Nfyb AA985999|Cbf-A nuclear transcription factor-Y beta protein-coding common_peak1_155_1402_-0.128131221639325_10.3902336828002_1.42706555061145 chr19 32757526 32758943 + 1.42706555061145 NA 5' UTR (NM_008960, exon 1 of 9) 5' UTR (NM_008960, exon 1 of 9) 657 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1 phosphatase and tensin homolog protein-coding unique_peak2_9_68_-0.64400254033375_5.78652318661129_1.4264948003859-2 chr10 76542744 76543297 + 1.4264948003859 NA intron (NM_146006, intron 11 of 21) intron (NM_146006, intron 11 of 21) 11415 NM_146006 16987 Mm.55075 NM_146006 ENSMUSG00000033105 Lss 2810025N20Rik|D10Ertd116e|Osc lanosterol synthase protein-coding unique_peak2_9_68_-0.64400254033375_5.78652318661129_1.4264948003859 chr1 89069679 89070194 + 1.4264948003859 NA promoter-TSS (NM_133816) promoter-TSS (NM_133816) -526 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding unique_peak2_9_68_-0.64400254033375_5.78652318661129_1.4264948003859-3 chr10 81812164 81812634 + 1.4264948003859 NA intron (NM_001142963, intron 1 of 3) CpG 213 NM_001142963 100233208 Mm.327168 NM_001142963 ENSMUSG00000096856 Gm10778 ENSMUSG00000074860 predicted gene 10778 protein-coding common_peak2_108_737_0.16426522946924_9.60960962079502_1.4262631621386 chr10 80319465 80321175 + 1.4262631621386 NA TTS (NM_008793) TTS (NM_008793) 228 NM_025521 66374 Mm.383824 NM_025521 ENSMUSG00000020133 2310011J03Rik AI452186|AW545358 RIKEN cDNA 2310011J03 gene protein-coding unique_peak2_23_95_0.428812967370939_6.79936898440662_1.42600804858695-2 chr7 99448693 99449465 + 1.42600804858695 NA exon (NM_201352, exon 10 of 18) exon (NM_201352, exon 10 of 18) -16925 NM_028145 72184 Mm.153585 NM_028145 ENSMUSG00000035298 Klhl35 2810406K13Rik kelch-like 35 protein-coding unique_peak2_23_95_0.428812967370939_6.79936898440662_1.42600804858695 chr4 45763726 45764387 + 1.42600804858695 NA intron (NR_046068, intron 1 of 2) intron (NR_046068, intron 1 of 2) 167 NR_046068 100040567 Mm.490816 NR_046068 ENSMUSG00000085876 Gm12409 OTTMUSG00000006726 predicted gene 12409 ncRNA common_peak2_23_95_0.428812967370939_6.79936898440662_1.42600804858695 chr17 26980892 26981481 + 1.42600804858695 NA Intergenic L1MB3|LINE|L1 8007 NM_001005916 474156 Mm.328890 NM_001005916 ENSMUSG00000079605 Zbtb9 3930402F13Rik zinc finger and BTB domain containing 9 protein-coding common_peak1_23_95_0.428812967370939_6.79936898440662_1.42600804858695-2 chr9 15709321 15709873 + 1.42600804858695 NA promoter-TSS (NM_172289) promoter-TSS (NM_172289) -172 NM_172289 234967 Mm.138815 NM_172289 ENSMUSG00000043885 Slc36a4 6330573I15Rik|PAT4 solute carrier family 36 (proton/amino acid symporter), member 4 protein-coding common_peak1_23_95_0.428812967370939_6.79936898440662_1.42600804858695 chr13 101756365 101756948 + 1.42600804858695 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) 11561 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding unique_peak2_23_95_0.428812967370939_6.79936898440662_1.42600804858695-3 chr8 119885500 119886312 + 1.42600804858695 NA Intergenic Intergenic 23601 NM_146219 234796 Mm.86446 NM_146219 ENSMUSG00000031828 Klhl36 - kelch-like 36 protein-coding common_peak1_72_581_-0.202556316522655_9.08359718464695_1.42561530032997 chr19 18670907 18671790 + 1.42561530032997 NA intron (NM_026120, intron 1 of 7) CpG 568 NM_026120 67383 Mm.306602 NM_026120 ENSMUSG00000024726 Carnmt1 2410127L17Rik carnosine N-methyltransferase 1 protein-coding common_peak1_72_581_-0.202556316522655_9.08359718464695_1.42561530032997-2 chr3 19162459 19163094 + 1.42561530032997 NA intron (NM_028840, intron 1 of 6) CpG 289 NM_028840 74252 Mm.200383 NM_028840 ENSMUSG00000027599 Armc1 2310016N05Rik|2900046P06Rik|3110009G21Rik|AA409258|AW048872|Arcp|C330014L16Rik armadillo repeat containing 1 protein-coding common_peak2_77_627_-0.19506498809741_9.19708825484292_1.42525973408502-2 chr3 131155564 131159035 + 1.42525973408502 NA intron (NM_001276402, intron 3 of 9) intron (NM_001276402, intron 3 of 9) 44508 NM_001276403 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak2_77_627_-0.19506498809741_9.19708825484292_1.42525973408502 chr2 118727403 118729224 + 1.42525973408502 NA exon (NM_001290790, exon 1 of 31) exon (NM_001290790, exon 1 of 31) 125 NM_177568 18796 Mm.215156 NM_177568 ENSMUSG00000040061 Plcb2 AI550384|B230205M18Rik|B230399N12 phospholipase C, beta 2 protein-coding common_peak1_176_1377_0.121300748490818_10.4890105469497_1.42515709823886 chr2 156110917 156112421 + 1.42515709823886 NA intron (NM_029397, intron 1 of 2) CpG 296 NM_170598 75710 Mm.27660 NM_029397 ENSMUSG00000089824 Rbm12 5730420G12Rik|9430070C08Rik|AI852903|SWAN|mKIAA0765 RNA binding motif protein 12 protein-coding common_peak1_41_208_0.296727822903972_7.85572304353287_1.42434125398392 chr2 48813575 48814517 + 1.42434125398392 NA promoter-TSS (NM_007396) promoter-TSS (NM_007396) -63 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding common_peak2_158_1200_0.129855845890763_10.294948358651_1.42394705433905 chr1 170214205 170216286 + 1.42394705433905 NA 5' UTR (NM_010633, exon 1 of 8) 5' UTR (NM_010633, exon 1 of 8) 148 NM_010633 16589 Mm.209150 NM_010633 ENSMUSG00000026667 Uhmk1 4732477C12Rik|4930500M09Rik|AA673513|AI449218|AU021979|C820018A03Rik|KIS|Kist|OTTMUSG00000021542|P-CIP2 U2AF homology motif (UHM) kinase 1 protein-coding common_peak2_66_389_0.223213386400113_8.71893700694967_1.42290177869748 chr3 95855189 95856404 + 1.42290177869748 NA promoter-TSS (NM_027541) promoter-TSS (NM_027541) -43 NM_027541 70767 Mm.279872 NM_027541 ENSMUSG00000015748 Prpf3 3632413F13Rik pre-mRNA processing factor 3 protein-coding common_peak1_66_389_0.223213386400113_8.71893700694967_1.42290177869748 chr1 182490082 182490996 + 1.42290177869748 NA intron (NM_009794, intron 5 of 20) intron (NM_009794, intron 5 of 20) 26944 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_298_2682_0.0878343799078216_11.4335485292144_1.42210482762508 chr19 41343010 41345996 + 1.42210482762508 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 40567 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak2_165_1268_0.126641826513598_10.3727972670979_1.42183394469867 chr16 13901946 13904178 + 1.42183394469867 NA promoter-TSS (NM_001039533) promoter-TSS (NM_001039533) 83 NM_001039533 94184 Mm.171484 NM_053181 ENSMUSG00000022680 Pdxdc1 2210010A19Rik|AA415817|Kiaa0251-hp pyridoxal-dependent decarboxylase domain containing 1 protein-coding common_peak1_97_642_0.174813620769093_9.41608173771249_1.42175749101686 chr11 98541164 98542810 + 1.42175749101686 NA intron (NM_011771, intron 1 of 7) intron (NM_011771, intron 1 of 7) 4044 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding unique_peak2_32_238_-0.323546860319869_7.73909337782081_1.42140871203119 chr6 98608742 98610204 + 1.42140871203119 NA Intergenic Intergenic -266719 NM_001128092 330390 Mm.484161 NM_001128092 ENSMUSG00000090667 Gm765 - predicted gene 765 protein-coding common_peak1_37_278_-0.297144797245941_7.97554891320622_1.42135470411447 chr15 78174401 78174992 + 1.42135470411447 NA promoter-TSS (NM_025931) promoter-TSS (NM_025931) -588 NM_025931 67042 Mm.30191 NM_025931 ENSMUSG00000016637 Ift27 2600013G09Rik|Rabl4 intraflagellar transport 27 protein-coding common_peak1_37_278_-0.297144797245941_7.97554891320622_1.42135470411447-2 chr5 135702008 135702732 + 1.42135470411447 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 13225 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak2_167_1529_-0.122004360222448_10.5183137574688_1.42068345835284 chr1 9746867 9748495 + 1.42068345835284 NA promoter-TSS (NR_040462) promoter-TSS (NR_040462) 33 NR_040462 73331 Mm.460470 NR_040462 1700034P13Rik - RIKEN cDNA 1700034P13 gene ncRNA common_peak1_45_344_-0.265379436385667_8.2977628334727_1.42064018384965 chr4 156030868 156031958 + 1.42064018384965 NA Intergenic RLTR20B4_MM|LTR|ERVK 5071 NM_021985 21936 Mm.3180 NM_009400 ENSMUSG00000041954 Tnfrsf18 AITR|Gitr tumor necrosis factor receptor superfamily, member 18 protein-coding common_peak1_15_53_0.5413657609617_6.02557038264432_1.42039180492404-3 chr11 78213520 78213869 + 1.42039180492404 NA intron (NM_009297, intron 28 of 36) intron (NM_009297, intron 28 of 36) 20302 NM_001045516 216974 Mm.50974 NM_001045516 ENSMUSG00000044122 Proca1 4933404M19Rik protein interacting with cyclin A1 protein-coding common_peak1_15_53_0.5413657609617_6.02557038264432_1.42039180492404 chr10 60283696 60284110 + 1.42039180492404 NA promoter-TSS (NM_001146124) promoter-TSS (NM_001146124) -558 NM_001146124 19156 Mm.29978 NM_011179 ENSMUSG00000004207 Psap AI037048|SGP-1 prosaposin protein-coding common_peak1_15_53_0.5413657609617_6.02557038264432_1.42039180492404-4 chr15 66795793 66796169 + 1.42039180492404 NA intron (NM_001029841, intron 2 of 7) intron (NM_001029841, intron 2 of 7) 35848 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_15_53_0.5413657609617_6.02557038264432_1.42039180492404-5 chr5 93131929 93132388 + 1.42039180492404 NA intron (NM_001310669, intron 1 of 10) intron (NM_001310669, intron 1 of 10) 38742 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_15_53_0.5413657609617_6.02557038264432_1.42039180492404-2 chr10 127145171 127145520 + 1.42039180492404 NA Intergenic RMER17C|LTR|ERVK -19811 NR_045166 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak2_114_981_-0.153012823342863_9.86307280264326_1.4203668665654 chr2 112713497 112715923 + 1.4203668665654 NA intron (NM_177652, intron 65 of 103) intron (NM_177652, intron 65 of 103) 155028 NM_001165935 74268 Mm.315125 NM_028844 ENSMUSG00000003604 Aven 1700013A01Rik|1700056A21Rik|mAven-L|mAven-S apoptosis, caspase activation inhibitor protein-coding common_peak1_124_1081_-0.145364004812112_10.0068027814208_1.42034852707731 chr16 11501267 11502683 + 1.42034852707731 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 96327 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak2_31_143_0.352940572869212_7.34639528787692_1.42025624913079-2 chr17 35210354 35211272 + 1.42025624913079 NA Intergenic Intergenic -5462 NM_010735 16992 Mm.87787 NM_010735 ENSMUSG00000024402 Lta LT|LT-[a]|LT-alpha|LT[a]|LTalpha|Ltx|TNF-beta|TNFSF1|Tnfb|Tnfsf1b|Tnlg1e|hlb382 lymphotoxin A protein-coding common_peak2_25_184_-0.37596021587538_7.34340135257862_1.42025624913079-2 chr2 80638524 80639346 + 1.42025624913079 NA promoter-TSS (NM_001190179) promoter-TSS (NM_001190179) 123 NM_027091 69482 Mm.29200 NM_027091 ENSMUSG00000026999 Nup35 2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44 nucleoporin 35 protein-coding unique_peak2_31_143_0.352940572869212_7.34639528787692_1.42025624913079 chr5 143560903 143562290 + 1.42025624913079 NA intron (NM_026050, intron 2 of 2) intron (NM_026050, intron 2 of 2) 12890 NM_026050 67238 Mm.383219 NM_026050 ENSMUSG00000083012 Fam220a 1500026F15Rik|2810453I06Rik|AW047776|Acpin1|Sipar family with sequence similarity 220, member A protein-coding common_peak1_31_143_0.352940572869212_7.34639528787692_1.42025624913079 chr7 12818468 12818890 + 1.42025624913079 NA intron (NM_026046, intron 1 of 1) CpG 181 NM_026046 67230 Mm.333574 NM_026046 ENSMUSG00000057894 Zfp329 2810439M05Rik|4632409L22Rik|ZNF329 zinc finger protein 329 protein-coding common_peak2_25_184_-0.37596021587538_7.34340135257862_1.42025624913079 chr13 52619211 52620334 + 1.42025624913079 NA intron (NM_001198977, intron 3 of 13) intron (NM_001198977, intron 3 of 13) 22890 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak2_31_143_0.352940572869212_7.34639528787692_1.42025624913079 chr1 191025366 191026273 + 1.42025624913079 NA exon (NM_001313747, exon 1 of 9) exon (NM_001313747, exon 1 of 9) 371 NM_001081259 226844 Mm.134053 NM_198025 ENSMUSG00000066595 Mfsd7b 9630055N22Rik|FLVCR|Flvcr1 major facilitator superfamily domain containing 7B protein-coding common_peak2_99_659_0.172917600263279_9.45278101437746_1.41995372302655 chr1 143701868 143703435 + 1.41995372302655 NA 5' UTR (NM_145991, exon 1 of 17) 5' UTR (NM_145991, exon 1 of 17) 242 NM_145991 214498 Mm.156727 NM_145991 ENSMUSG00000026361 Cdc73 8430414L16Rik|C130030P16Rik|C81219|Hrpt2 cell division cycle 73, Paf1/RNA polymerase II complex component protein-coding common_peak1_179_1407_0.119971641300047_10.5194174392873_1.41992056492563 chr18 60499648 60501762 + 1.41992056492563 NA intron (NM_134133, intron 1 of 1) L2a|LINE|L2 1278 NM_134133 106878 Mm.273197 NM_134133 ENSMUSG00000038059 Smim3 2010002N04Rik|AI195350|AW561905|Nid67|cI-41 small integral membrane protein 3 protein-coding common_peak1_74_599_-0.198668982206215_9.12948419939277_1.41974955503292 chr10 40882622 40883651 + 1.41974955503292 NA promoter-TSS (NM_031877) promoter-TSS (NM_031877) 7 NM_027879 71713 Mm.46063 NM_027879 ENSMUSG00000038446 Cdc40 1200003H23Rik|EHB3|PRP17 cell division cycle 40 protein-coding common_peak1_118_1021_-0.150107110697977_9.92212592558863_1.4196875963518 chr16 17927656 17928750 + 1.4196875963518 NA promoter-TSS (NM_153150) promoter-TSS (NM_153150) 16 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding common_peak2_316_2888_0.0845604696942353_11.5386347234117_1.41867292102732 chr4 148081992 148088519 + 1.41867292102732 NA intron (NM_001301281, intron 1 of 4) MIRb|SINE|MIR 2809 NM_009642 11610 Mm.46247 NM_009642 ENSMUSG00000029007 Agtrap 3300002E14Rik|AT1R|Atrap|D4Wsu124e angiotensin II, type I receptor-associated protein protein-coding common_peak1_24_176_-0.381590357946614_7.27681037110969_1.41767638271187 chr2 127507480 127508011 + 1.41767638271187 NA intron (NM_019789, intron 2 of 8) intron (NM_019789, intron 2 of 8) 13647 NM_001291005 56461 Mm.315292 NM_019789 ENSMUSG00000079056 Kcnip3 4933407H12Rik|AI413860|Csen|DREAM|KChIP3|R74849 Kv channel interacting protein 3, calsenilin protein-coding common_peak1_21_84_0.450406806556249_6.63459433941583_1.41761677518458-2 chr8 94453664 94454274 + 1.41761677518458 NA Intergenic ORR1B2|LTR|ERVL-MaLR -18794 NM_001033207 434341 Mm.334720 NM_001033207 ENSMUSG00000074151 Nlrc5 AI451557|AK220210|NOD27 NLR family, CARD domain containing 5 protein-coding unique_peak2_21_84_0.450406806556249_6.63459433941583_1.41761677518458 chr10 118866106 118866813 + 1.41761677518458 NA intron (NM_001014390, intron 2 of 2) intron (NM_001014390, intron 2 of 2) 2444 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding unique_peak2_21_84_0.450406806556249_6.63459433941583_1.41761677518458-2 chr5 140947572 140948316 + 1.41761677518458 NA intron (NM_175362, intron 1 of 24) intron (NM_175362, intron 1 of 24) 52652 NM_175362 108723 Mm.46187 NM_175362 ENSMUSG00000036526 Card11 0610008L17Rik|2410011D02Rik|BIMP3|CARMA1 caspase recruitment domain family, member 11 protein-coding common_peak1_21_84_0.450406806556249_6.63459433941583_1.41761677518458 chr1 72236667 72237141 + 1.41761677518458 NA Intergenic CpG -24597 NM_001005423 381269 Mm.422636 NM_001005423 ENSMUSG00000039395 Mreg Gm974|Wdt2|dsu melanoregulin protein-coding common_peak1_41_311_-0.281315263877394_8.14474458692355_1.41750653243581 chr18 80527737 80528451 + 1.41750653243581 NA Intergenic Intergenic 16452 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_196_1579_0.113397773560834_10.6824077298449_1.41743665364376 chr14 70576761 70578780 + 1.41743665364376 NA promoter-TSS (NM_153136) promoter-TSS (NM_153136) -77 NM_153136 213484 Mm.34191 NM_153136 ENSMUSG00000045211 Nudt18 BC036718 nudix (nucleoside diphosphate linked moiety X)-type motif 18 protein-coding common_peak2_90_583_0.18252048384003_9.28108480080003_1.41716061520811 chr2 4651319 4652422 + 1.41716061520811 NA intron (NM_026045, intron 1 of 9) intron (NM_026045, intron 1 of 9) 216 NM_026045 67229 Mm.38529 NM_026045 ENSMUSG00000039449 Prpf18 2810441A10Rik pre-mRNA processing factor 18 protein-coding unique_peak2_44_228_0.286974849467688_7.98269121283079_1.41692024473825 chr15 66785657 66786976 + 1.41692024473825 NA intron (NM_001029841, intron 6 of 7) intron (NM_001029841, intron 6 of 7) 45513 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_44_228_0.286974849467688_7.98269121283079_1.41692024473825 chr1 172601826 172603147 + 1.41692024473825 NA promoter-TSS (NM_001164725) promoter-TSS (NM_001164725) 65 NM_001164725 677296 Mm.439612 NM_001164725 ENSMUSG00000070504 Fcrl6 ENSMUSG00000070504|FcRH6|mIFGP6|moFcRH6 Fc receptor-like 6 protein-coding common_peak1_44_228_0.286974849467688_7.98269121283079_1.41692024473825 chr7 125602531 125603286 + 1.41692024473825 NA promoter-TSS (NM_021887) promoter-TSS (NM_021887) -521 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak1_19_73_0.481680862001826_6.45029379662986_1.41688263066034-2 chr11 115646783 115647237 + 1.41688263066034 NA intron (NM_001313936, intron 4 of 5) intron (NM_001313936, intron 4 of 5) -18715 NM_001252395 67283 Mm.383426 NM_026071 ENSMUSG00000020744 Slc25a19 2900089E13Rik|DNC|MUP1|TPC solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein-coding common_peak1_19_73_0.481680862001826_6.45029379662986_1.41688263066034-3 chr2 103680769 103681171 + 1.41688263066034 NA intron (NM_178890, intron 2 of 16) intron (NM_178890, intron 2 of 16) 80280 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding unique_peak2_14_103_-0.518395596729744_6.44124191977622_1.41688263066034-2 chr6 86822351 86823138 + 1.41688263066034 NA Intergenic Intergenic 26696 NR_028298 67170 Mm.119489 NR_028298 ENSMUSG00000100164 2610306M01Rik - RIKEN cDNA 2610306M01 gene ncRNA common_peak1_14_103_-0.518395596729744_6.44124191977622_1.41688263066034 chr2 166626738 166627065 + 1.41688263066034 NA intron (NM_177782, intron 5 of 39) intron (NM_177782, intron 5 of 39) -45817 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_19_73_0.481680862001826_6.45029379662986_1.41688263066034 chr1 176075998 176076437 + 1.41688263066034 NA intron (NM_001195816, intron 3 of 9) intron (NM_001195816, intron 3 of 9) 137725 NM_001195816 319455 Mm.338001 NM_176916 ENSMUSG00000055214 Pld5 B230365F16Rik phospholipase D family, member 5 protein-coding common_peak1_19_73_0.481680862001826_6.45029379662986_1.41688263066034-4 chr7 7171157 7171683 + 1.41688263066034 NA promoter-TSS (NM_146179) promoter-TSS (NM_146179) 67 NM_146179 232854 Mm.184857 NM_146179 ENSMUSG00000034538 Zfp418 A230102I05Rik zinc finger protein 418 protein-coding unique_peak2_14_103_-0.518395596729744_6.44124191977622_1.41688263066034 chr16 32147413 32148278 + 1.41688263066034 NA intron (NM_146069, intron 2 of 3) intron (NM_146069, intron 2 of 3) 17631 NM_146069 224109 Mm.33498 NM_146069 ENSMUSG00000052384 Nrros E430025L02Rik|Lrcc33|Lrrc33 negative regulator of reactive oxygen species protein-coding unique_peak2_14_103_-0.518395596729744_6.44124191977622_1.41688263066034-3 chrX 164317893 164318550 + 1.41688263066034 NA intron (NM_027153, intron 5 of 9) MTD|LTR|ERVL-MaLR 48790 NM_027153 69656 Mm.293463 NM_027153 ENSMUSG00000031379 Pir 2310042L19Rik|Pirnl pirin protein-coding common_peak1_36_175_0.320352032574113_7.61960763492435_1.41667381147171 chr8 69193204 69193880 + 1.41667381147171 NA Intergenic Intergenic -15504 NM_001013379 234358 Mm.334577 NM_001013379 ENSMUSG00000059897 Zfp930 - zinc finger protein 930 protein-coding unique_peak2_23_168_-0.38710396819009_7.20732745218714_1.41630521920245 chr13 67194391 67195165 + 1.41630521920245 NA intron (NM_001048204, intron 1 of 3) intron (NM_001048204, intron 1 of 3) 272 NM_001048204 218311 Mm.82396 NM_183156 ENSMUSG00000051037 Zfp455 3732412P20Rik|Rslcan-10 zinc finger protein 455 protein-coding common_peak1_358_3762_-0.0765744748203669_11.8393803366577_1.41610611378482 chr10 80051229 80054811 + 1.41610611378482 NA promoter-TSS (NM_001037741) promoter-TSS (NM_001037741) -468 NM_008162 625249 Mm.332810 NM_008162 ENSMUSG00000075706 Gpx4 GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx glutathione peroxidase 4 protein-coding common_peak1_54_299_0.252472327890034_8.3550548544409_1.41602698186015 chr6 50452129 50453427 + 1.41602698186015 NA intron (NM_001163645, intron 1 of 21) intron (NM_001163645, intron 1 of 21) 3392 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_57_321_0.244358747584307_8.45309625190677_1.4159653710304 chr14 61460071 61461346 + 1.4159653710304 NA Intergenic Intergenic -20761 NM_008466 16648 Mm.25548 NM_008466 ENSMUSG00000021929 Kpna3 IPOA4 karyopherin (importin) alpha 3 protein-coding common_peak2_83_525_0.191780276878909_9.13480912773176_1.41576935482166 chr5 41707398 41708716 + 1.41576935482166 NA promoter-TSS (NM_001310592) promoter-TSS (NM_001310592) 122 NR_132325 100972 Mm.41555 NM_027295 ENSMUSG00000029128 Rab28 2700023P08Rik|AW496496 RAB28, member RAS oncogene family protein-coding common_peak1_22_90_0.430666163894814_6.7231277221461_1.41571809622601-2 chr5 148769117 148769611 + 1.41571809622601 NA Intergenic B1_Mur3|SINE|Alu -8599 NR_131106 78015 Mm.243839 NR_131106 ENSMUSG00000085740 4930505K14Rik - RIKEN cDNA 4930505K14 gene ncRNA common_peak1_22_90_0.430666163894814_6.7231277221461_1.41571809622601-3 chr9 56448994 56449505 + 1.41571809622601 NA intron (NM_025812, intron 1 of 9) B1F|SINE|Alu 30403 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_22_90_0.430666163894814_6.7231277221461_1.41571809622601 chr13 113068398 113068889 + 1.41571809622601 NA intron (NM_001281487, intron 5 of 11) intron (NM_001281487, intron 5 of 11) -22255 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak2_48_369_-0.254505223605628_8.4041288487135_1.41567451636412 chr6 136477195 136479277 + 1.41567451636412 NA Intergenic RMER6A|LTR|ERVK -40615 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_105_711_0.16662064566307_9.55904375379793_1.41529582633282 chr1 39576346 39577528 + 1.41529582633282 NA exon (NM_001033135, exon 1 of 7) exon (NM_001033135, exon 1 of 7) 410 NM_001033135 67702 Mm.28614 NM_001033135 ENSMUSG00000048234 Rnf149 1600023E10Rik|AV037261|C76763|Gm15832|Greul4|OTTMUSG00000026591 ring finger protein 149 protein-coding common_peak2_51_278_0.257912243998101_8.25307743382824_1.41529016922485 chr1 21309434 21311143 + 1.41529016922485 NA Intergenic Intergenic -11976 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo common_peak2_51_278_0.257912243998101_8.25307743382824_1.41529016922485-2 chr6 56704011 56704891 + 1.41529016922485 NA intron (NM_025520, intron 1 of 4) CpG 248 NM_025520 66373 Mm.25642 NM_025520 ENSMUSG00000091625 Lsm5 2010208O10Rik|2310034K10Rik LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_51_278_0.257912243998101_8.25307743382824_1.41529016922485-3 chr8 23237029 23237890 + 1.41529016922485 NA intron (NM_024240, intron 1 of 7) CpG 209 NM_024240 109145 Mm.27945 NM_024240 ENSMUSG00000031546 Gins4 2810037C03Rik|4933405K01Rik|Sld5 GINS complex subunit 4 (Sld5 homolog) protein-coding common_peak1_40_201_0.303231782313631_7.80982737390861_1.41494181390732-2 chr6 121183715 121184609 + 1.41494181390732 NA non-coding (NR_130903, exon 1 of 7) non-coding (NR_130903, exon 1 of 7) 495 NM_001304773 74043 Mm.491240 NM_028730 ENSMUSG00000067825 Pex26 4632428M11Rik peroxisomal biogenesis factor 26 protein-coding common_peak1_40_201_0.303231782313631_7.80982737390861_1.41494181390732 chr13 84222174 84222920 + 1.41494181390732 NA intron (NR_029418, intron 1 of 10) intron (NR_029418, intron 1 of 10) 251 NM_175187 72745 Mm.295063 NM_175187 ENSMUSG00000035762 Tmem161b 2810446P07Rik|AI843389 transmembrane protein 161B protein-coding common_peak2_63_499_-0.216306399164207_8.85763108507998_1.41490583270315 chr7 45896965 45898149 + 1.41490583270315 NA promoter-TSS (NM_021482) promoter-TSS (NM_021482) 488 NM_144801 70209 Mm.163766 NM_144801 ENSMUSG00000002781 Tmem143 2310076O21Rik|AI481604 transmembrane protein 143 protein-coding common_peak1_63_499_-0.216306399164207_8.85763108507998_1.41490583270315 chr1 180355705 180356561 + 1.41490583270315 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -25584 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_16_58_0.52089321161233_6.14308965516801_1.41469833047472-5 chr2 126489712 126490078 + 1.41469833047472 NA intron (NM_001080944, intron 1 of 27) intron (NM_001080944, intron 1 of 27) 1658 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding common_peak1_16_58_0.52089321161233_6.14308965516801_1.41469833047472 chr10 98916507 98916873 + 1.41469833047472 NA intron (NM_026482, intron 1 of 20) intron (NM_026482, intron 1 of 20) 1538 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_16_58_0.52089321161233_6.14308965516801_1.41469833047472-3 chr17 24671617 24672049 + 1.41469833047472 NA intron (NM_183149, intron 1 of 11) intron (NM_183149, intron 1 of 11) 2081 NM_183149 213753 Mm.219581 NM_183149 ENSMUSG00000041130 Zfp598 BC023040|Ntrap|Znf598 zinc finger protein 598 protein-coding common_peak1_16_58_0.52089321161233_6.14308965516801_1.41469833047472-2 chr11 76732933 76733316 + 1.41469833047472 NA intron (NM_016810, intron 8 of 8) RMER15|LTR|ERVL 30431 NM_016810 53334 Mm.20931 NM_016810 ENSMUSG00000010392 Gosr1 AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28 golgi SNAP receptor complex member 1 protein-coding common_peak1_16_58_0.52089321161233_6.14308965516801_1.41469833047472-4 chr19 18623654 18624072 + 1.41469833047472 NA intron (NM_017375, intron 1 of 9) intron (NM_017375, intron 1 of 9) 7950 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_255_2515_-0.0942136990086961_11.2498093573749_1.41388186903891 chr11 103170290 103172688 + 1.41388186903891 NA intron (NM_019679, intron 1 of 26) CpG 351 NM_019679 57778 Mm.138913 NM_019679 ENSMUSG00000055805 Fmnl1 8030453N10Rik|AI553564|Fmnl|Fnrl|Frls formin-like 1 protein-coding common_peak1_206_1955_-0.106960818552155_10.8802102456762_1.41385216886108 chr14 54685609 54687641 + 1.41385216886108 NA exon (NM_001085473, exon 1 of 19) exon (NM_001085473, exon 1 of 19) 306 NM_001085473 56215 Mm.297078 NM_019567 ENSMUSG00000022185 Acin1 2610036I19Rik|2610510L13Rik|Acinus|Acn|C79325|acinusL|acinusS|mKIAA0670 apoptotic chromatin condensation inducer 1 protein-coding common_peak2_90_748_-0.176476865738703_9.4605834755894_1.41360200513806 chr5 64958671 64960310 + 1.41360200513806 NA intron (NM_011604, intron 1 of 1) intron (NM_011604, intron 1 of 1) 544 NM_011604 21899 Mm.42146 NM_011604 ENSMUSG00000051498 Tlr6 - toll-like receptor 6 protein-coding common_peak1_18_68_0.491839746618721_6.35444433008753_1.41359277277622-3 chr16 91433244 91433676 + 1.41359277277622 NA Intergenic B3|SINE|B2 27225 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding common_peak1_18_68_0.491839746618721_6.35444433008753_1.41359277277622-2 chr15 74963651 74964327 + 1.41359277277622 NA Intergenic RLTR26D_MM|LTR|ERVK 8883 NM_001164040 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding unique_peak2_18_68_0.491839746618721_6.35444433008753_1.41359277277622-2 chr7 112321969 112322616 + 1.41359277277622 NA intron (NM_001193305, intron 12 of 25) intron (NM_001193305, intron 12 of 25) -46016 NM_027587 100504195 Mm.291129 NM_027587 ENSMUSG00000030771 Micalcl 4921517J23Rik MICAL C-terminal like protein-coding common_peak1_18_68_0.491839746618721_6.35444433008753_1.41359277277622 chr15 55829250 55829737 + 1.41359277277622 NA intron (NM_016667, intron 1 of 6) intron (NM_016667, intron 1 of 6) 77456 NM_016667 20649 Mm.309425 NM_016667 ENSMUSG00000060429 Sntb1 - syntrophin, basic 1 protein-coding unique_peak2_18_68_0.491839746618721_6.35444433008753_1.41359277277622 chr6 115037418 115037978 + 1.41359277277622 NA exon (NM_026894, exon 1 of 8) exon (NM_026894, exon 1 of 8) 176 NM_026894 68971 Mm.24937 NM_026894 ENSMUSG00000030316 Tamm41 1500001M20Rik|TAM41 TAM41 mitochondrial translocator assembly and maintenance homolog protein-coding common_peak1_31_230_-0.328883467104533_7.68730730786379_1.41318869430124-2 chr11 58008202 58008771 + 1.41318869430124 NA promoter-TSS (NM_028451) promoter-TSS (NM_028451) -578 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak1_31_230_-0.328883467104533_7.68730730786379_1.41318869430124 chr10 26228495 26229146 + 1.41318869430124 NA promoter-TSS (NM_001013766) promoter-TSS (NM_001013766) -887 NM_001013766 268288 Mm.213322 NM_001013766 ENSMUSG00000051354 Samd3 Gm623 sterile alpha motif domain containing 3 protein-coding common_peak2_31_230_-0.328883467104533_7.68730730786379_1.41318869430124 chr13 75797122 75798018 + 1.41318869430124 NA Intergenic B1_Mur2|SINE|Alu -42316 NM_053108 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak2_175_1614_-0.117683773328269_10.5984765629172_1.41269286121972 chr13 24500695 24503492 + 1.41269286121972 NA Intergenic (TTTTG)n|Simple_repeat|Simple_repeat -80096 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_17_63_0.504685361872667_6.25234268093633_1.41267963589689 chr2 181382499 181383026 + 1.41267963589689 NA intron (NM_023684, intron 3 of 4) intron (NM_023684, intron 3 of 4) -1488 NR_045164 329584 Mm.386906 NR_045164 ENSMUSG00000085028 Slc2a4rg-ps C430010C01|Gm14462|OTTMUSG00000016710 Slc2a4 regulator, pseudogene pseudo common_peak1_17_63_0.504685361872667_6.25234268093633_1.41267963589689-2 chr5 114896885 114897277 + 1.41267963589689 NA 5' UTR (NM_011854, exon 1 of 6) 5' UTR (NM_011854, exon 1 of 6) 147 NM_011854 23962 Mm.228363 NM_011854 ENSMUSG00000029561 Oasl2 M1204|Mmu-OASL|Oasl 2'-5' oligoadenylate synthetase-like 2 protein-coding unique_peak2_44_335_-0.266138785214128_8.2592480301717_1.41165052334817 chr10 99203621 99205220 + 1.41165052334817 NA Intergenic Intergenic -58811 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_57_446_-0.228855395484393_8.68970332344112_1.41154272784681 chr15 73067805 73068480 + 1.41154272784681 NA Intergenic ID_B1|SINE|B4 -6938 NM_001164643 76510 Mm.158902 NM_029640 ENSMUSG00000047921 Trappc9 1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882 trafficking protein particle complex 9 protein-coding common_peak1_54_420_-0.23638540468048_8.59948372072616_1.41146013743824 chr13 74061880 74062546 + 1.41146013743824 NA promoter-TSS (NM_028959) promoter-TSS (NM_028959) 72 NM_028959 74470 Mm.73234 NM_028959 ENSMUSG00000021572 Cep72 2610029E11Rik|4933440J22Rik centrosomal protein 72 protein-coding common_peak1_36_270_-0.302365390142461_7.93096634628264_1.41085476085522 chr13 114305231 114305967 + 1.41085476085522 NA intron (NM_010887, intron 4 of 4) intron (NM_010887, intron 4 of 4) 82495 NM_010887 17993 Mm.253142 NM_010887 ENSMUSG00000021764 Ndufs4 6720411N02Rik|C1-18k NADH dehydrogenase (ubiquinone) Fe-S protein 4 protein-coding unique_peak2_36_270_-0.302365390142461_7.93096634628264_1.41085476085522 chr13 97857395 97858713 + 1.41085476085522 NA Intergenic Intergenic 298054 NR_046157 328314 Mm.138047 NR_046157 ENSMUSG00000110235 Gm5086 B230311A21|EG328314 predicted gene 5086 ncRNA common_peak2_36_270_-0.302365390142461_7.93096634628264_1.41085476085522 chr10 76530800 76532221 + 1.41085476085522 NA promoter-TSS (NM_146006) promoter-TSS (NM_146006) -95 NM_146006 16987 Mm.55075 NM_146006 ENSMUSG00000033105 Lss 2810025N20Rik|D10Ertd116e|Osc lanosterol synthase protein-coding common_peak2_109_931_-0.156282815082008_9.78604473711328_1.41065028811433 chr1 51576797 51579677 + 1.41065028811433 NA Intergenic Lx9|LINE|L1 -99838 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak2_109_931_-0.156282815082008_9.78604473711328_1.41065028811433-2 chr8 120562476 120565543 + 1.41065028811433 NA intron (NM_198671, intron 3 of 15) intron (NM_198671, intron 3 of 15) 25066 NM_178856 272551 Mm.275910 NM_178856 ENSMUSG00000031821 Gins2 2210013I18Rik|4833427B12Rik|AI323585|Pfs2 GINS complex subunit 2 (Psf2 homolog) protein-coding common_peak1_157_1422_-0.12600854422681_10.4117156744131_1.41053224250901 chr4 135855346 135857008 + 1.41053224250901 NA 5' UTR (NM_001284196, exon 1 of 6) 5' UTR (NM_001284196, exon 1 of 6) 106 NM_010178 14105 Mm.10229 NM_010178 ENSMUSG00000028676 Srsf10 FUSIP2|Fusip1|NSSR1|NSSR2|Nssr|SRrp40|Sfrs13a|Srsf13a|TASR|TASR1|TASR2 serine/arginine-rich splicing factor 10 protein-coding common_peak1_30_137_0.358157747956137_7.28760333075624_1.41052498563211-2 chr15 5510890 5511576 + 1.41052498563211 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 14915 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak2_30_137_0.358157747956137_7.28760333075624_1.41052498563211 chr3 154093217 154094303 + 1.41052498563211 NA intron (NM_001081263, intron 1 of 21) intron (NM_001081263, intron 1 of 21) 120324 NM_001081263 242259 Mm.239962 NM_001081263 ENSMUSG00000028360 Slc44a5 AA117069|Gm422 solute carrier family 44, member 5 protein-coding common_peak1_30_137_0.358157747956137_7.28760333075624_1.41052498563211 chr1 165812189 165812819 + 1.41052498563211 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 23823 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_30_137_0.358157747956137_7.28760333075624_1.41052498563211-3 chr4 130925196 130925726 + 1.41052498563211 NA intron (NM_010686, intron 1 of 7) intron (NM_010686, intron 1 of 7) 12127 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding common_peak2_30_137_0.358157747956137_7.28760333075624_1.41052498563211-2 chr8 128619122 128620349 + 1.41052498563211 NA Intergenic ID_B1|SINE|B4 -65919 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding unique_peak2_15_110_-0.498162603224938_6.54533456473764_1.41015376676289 chr17 28612274 28613323 + 1.41015376676289 NA intron (NM_016795, intron 2 of 15) intron (NM_016795, intron 2 of 15) 9656 NM_016795 20815 Mm.15252 NM_016795 ENSMUSG00000004865 Srpk1 AU017960 serine/arginine-rich protein specific kinase 1 protein-coding common_peak2_20_79_0.455546548911135_6.54970136934293_1.41015376676289 chr11 119622654 119623210 + 1.41015376676289 NA intron (NM_028898, intron 1 of 33) BC1_Mm|scRNA|scRNA 20027 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak1_15_110_-0.498162603224938_6.54533456473764_1.41015376676289 chr11 67515235 67515569 + 1.41015376676289 NA Intergenic Intergenic -17596 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_20_79_0.455546548911135_6.54970136934293_1.41015376676289 chr10 111234786 111235320 + 1.41015376676289 NA intron (NM_001003717, intron 3 of 22) Tigger7|DNA|TcMar-Tigger -63626 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding common_peak1_15_110_-0.498162603224938_6.54533456473764_1.41015376676289-2 chr5 115543654 115544022 + 1.41015376676289 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) -15629 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak2_197_1590_0.112348654669473_10.6918924476658_1.41001259631565 chr2 132251948 132254213 + 1.41001259631565 NA promoter-TSS (NM_011045) promoter-TSS (NM_011045) 100 NM_011045 18538 Mm.7141 NM_011045 ENSMUSG00000027342 Pcna - proliferating cell nuclear antigen protein-coding common_peak2_315_2878_0.0839716399225932_11.5333378935247_1.40984847472049 chr7 7297817 7300443 + 1.40984847472049 NA promoter-TSS (NM_001302387) promoter-TSS (NM_001302387) 239 NR_049193 100885832 NR_049193 ENSMUSG00000093599 Mir5620 Gm23572|mir-5620|mmu-mir-5620 microRNA 5620 ncRNA common_peak1_35_168_0.330418236776839_7.5660885546706_1.4098234804291-2 chr4 135963728 135964369 + 1.4098234804291 NA Intergenic CpG -1117 NM_178389 74246 Mm.247946 NM_178389 ENSMUSG00000028671 Gale 2310002A12Rik|AI323962 galactose-4-epimerase, UDP protein-coding common_peak1_35_168_0.330418236776839_7.5660885546706_1.4098234804291 chr14 61619879 61620538 + 1.4098234804291 NA intron (NR_028264, intron 5 of 6) ID_B1|SINE|B4 11764 NR_029734 387134 NR_029734 ENSMUSG00000092995 Mir16-1 Mirn16|Mirn16-1|miR-16|mir-16-1 microRNA 16-1 ncRNA common_peak2_35_168_0.330418236776839_7.5660885546706_1.4098234804291 chr11 54214507 54215414 + 1.4098234804291 NA Intergenic Intergenic -1672 NR_045506 71056 Mm.56332 NR_045506 ENSMUSG00000086209 4933405E24Rik - RIKEN cDNA 4933405E24 gene ncRNA common_peak1_47_249_0.274603494616365_8.10308603197027_1.4097608390817 chr9 107281136 107282021 + 1.4097608390817 NA intron (NM_001316691, intron 1 of 7) intron (NM_001316691, intron 1 of 7) 7818 NM_001316691 102626 Mm.222612 NM_178907 ENSMUSG00000032577 Mapkapk3 3PK|AI874665|MAPKAP-K3|MAPKAP3|MK-3|MK3|MapkKapk3 mitogen-activated protein kinase-activated protein kinase 3 protein-coding unique_peak2_21_153_-0.40698879800095_7.06329214169443_1.40965117404235 chr12 59020654 59021651 + 1.40965117404235 NA intron (NM_025656, intron 6 of 9) intron (NM_025656, intron 6 of 9) 7761 NM_025656 66603 Mm.35353 NM_025656 ENSMUSG00000060121 Gemin2 Sip1|gemin-2 gem (nuclear organelle) associated protein 2 protein-coding common_peak2_21_153_-0.40698879800095_7.06329214169443_1.40965117404235 chr14 55557047 55557955 + 1.40965117404235 NA Intergenic B1_Mus1|SINE|Alu -2528 NR_037572 28199 Mm.11535 NM_133734 ENSMUSG00000022214 Dcaf11 0710008A13Rik|C76035|D14Ucla1|Dacf11|GLO14|Wdr23 DDB1 and CUL4 associated factor 11 protein-coding common_peak1_21_153_-0.40698879800095_7.06329214169443_1.40965117404235 chr17 12782944 12783458 + 1.40965117404235 NA intron (NR_027784, intron 2 of 2) B4|SINE|B4 -13495 NM_010515 16004 Mm.26553 NM_010515 ENSMUSG00000023830 Igf2r AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300 insulin-like growth factor 2 receptor protein-coding common_peak1_21_153_-0.40698879800095_7.06329214169443_1.40965117404235-2 chr7 141579326 141579744 + 1.40965117404235 NA intron (NM_007459, intron 1 of 21) B1_Mur4|SINE|Alu 17355 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding common_peak1_65_382_0.22273167692228_8.6925664203861_1.40885804717601 chr8 25753799 25754969 + 1.40885804717601 NA promoter-TSS (NM_028102) promoter-TSS (NM_028102) -104 NM_028102 72108 Mm.246875 NM_028102 ENSMUSG00000061313 Ddhd2 2010305K11Rik|SAMWD1|mKIAA0725 DDHD domain containing 2 protein-coding common_peak1_19_138_-0.427806845092731_6.90503765017714_1.40869975814354-2 chr6 86592814 86593260 + 1.40869975814354 NA Intergenic B1_Mur4|SINE|Alu -35137 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak1_19_138_-0.427806845092731_6.90503765017714_1.40869975814354 chr5 92042704 92043158 + 1.40869975814354 NA promoter-TSS (NM_001276315) promoter-TSS (NM_001276315) 111 NM_177270 53886 Mm.44963 NM_016912 ENSMUSG00000029403 Cdkl2 5330436L21Rik|AI505225|KKIAMRE|Kkm cyclin-dependent kinase-like 2 (CDC2-related kinase) protein-coding common_peak1_22_161_-0.401389198791114_7.13915540348907_1.40843493904963 chr1 133695911 133696462 + 1.40843493904963 NA Intergenic Intergenic -6078 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding common_peak1_22_161_-0.401389198791114_7.13915540348907_1.40843493904963-2 chr4 145300912 145301433 + 1.40843493904963 NA intron (NM_009401, intron 2 of 12) intron (NM_009401, intron 2 of 12) 13975 NM_009401 21941 Mm.12810 NM_009401 ENSMUSG00000028602 Tnfrsf8 Cd30|D1S166E|Ki|Ki-1 tumor necrosis factor receptor superfamily, member 8 protein-coding common_peak1_153_1153_0.13090634331394_10.2378806803025_1.40835825921048 chr2 25210435 25212119 + 1.40835825921048 NA exon (NM_021393, exon 1 of 13) exon (NM_021393, exon 1 of 13) 212 NM_021393 58202 Mm.116418 NM_021393 ENSMUSG00000013465 Nelfb A730008L03Rik|AB041607|AI663983|Cobra1|Nelf-b negative elongation factor complex member B protein-coding common_peak1_217_2078_-0.103319496142378_10.9700142947872_1.40777909868397 chr18 35770792 35772849 + 1.40777909868397 NA 5' UTR (NM_019912, exon 1 of 7) 5' UTR (NM_019912, exon 1 of 7) 261 NM_019912 56550 Mm.180052 NM_019912 ENSMUSG00000091896 Ube2d2a 1500034D03Rik|Ubc2e|Ube2d2|ubc4 ubiquitin-conjugating enzyme E2D 2A protein-coding unique_peak2_16_117_-0.47910678838767_6.64308965516801_1.40646700158589 chr12 108835173 108835958 + 1.40646700158589 NA intron (NM_181328, intron 1 of 3) CpG 311 NM_181328 214663 Mm.266264 NM_181328 ENSMUSG00000021265 Slc25a29 C030003J19Rik|CACL|mCACL solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29 protein-coding common_peak1_16_117_-0.47910678838767_6.64308965516801_1.40646700158589 chr4 150808754 150809139 + 1.40646700158589 NA Intergenic Intergenic 46003 NR_040649 73348 Mm.396218 NR_040649 ENSMUSG00000078492 1700045H11Rik - RIKEN cDNA 1700045H11 gene ncRNA unique_peak2_16_117_-0.47910678838767_6.64308965516801_1.40646700158589-2 chr17 71617747 71618594 + 1.40646700158589 NA intron (NM_175639, intron 1 of 17) intron (NM_175639, intron 1 of 17) 1955 NM_175639 72515 Mm.257762 NM_175639 ENSMUSG00000041057 Wdr43 2610318G08Rik|AU020887|AV024208|Wrd43|mKIAA0007 WD repeat domain 43 protein-coding unique_peak2_16_117_-0.47910678838767_6.64308965516801_1.40646700158589-3 chr19 37310962 37311815 + 1.40646700158589 NA intron (NM_031156, intron 9 of 23) intron (NM_031156, intron 9 of 23) 19225 NM_031156 15925 Mm.28366 NM_031156 ENSMUSG00000056999 Ide 1300012G03Rik|4833415K22Rik|AA675336|AI507533 insulin degrading enzyme protein-coding common_peak2_246_2107_0.0977099668345094_11.0905141350545_1.40619236468793 chr2 3511618 3513861 + 1.40619236468793 NA promoter-TSS (NM_177647) promoter-TSS (NM_177647) 75 NR_103465 50497 Mm.89341 NM_015765 ENSMUSG00000051396 Hspa14 70kDa|HSP70L1|Hsp70-4|NST-1|hsr.1 heat shock protein 14 protein-coding common_peak1_18_131_-0.444029915961563_6.82237916137767_1.40612184567901 chr19 9115898 9116365 + 1.40612184567901 NA intron (NM_025610, intron 5 of 6) intron (NM_025610, intron 5 of 6) 19435 NM_025610 66514 Mm.272847 NM_025610 ENSMUSG00000024654 Asrgl1 2410004D18Rik|ALP|ALP1|AU040643|AW060375 asparaginase like 1 protein-coding common_peak1_47_360_-0.255467247608719_8.36812140308281_1.40589516542083 chr4 129584557 129585404 + 1.40589516542083 NA Intergenic Intergenic -6400 NM_182783 230766 Mm.20377 NM_182783 ENSMUSG00000050493 Fam167b SEC family with sequence similarity 167, member B protein-coding common_peak2_65_517_-0.212876028839318_8.9103702732669_1.40575875295704-2 chr9 122127480 122130157 + 1.40575875295704 NA intron (NM_001164572, intron 1 of 5) intron (NM_001164572, intron 1 of 5) 11552 NM_133741 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak2_65_517_-0.212876028839318_8.9103702732669_1.40575875295704 chr19 31082113 31083671 + 1.40575875295704 NA promoter-TSS (NM_031249) promoter-TSS (NM_031249) 51 NM_031249 83410 Mm.22031 NM_031249 ENSMUSG00000053536 Cstf2t 64kDa|C77975|tCstF-64|tauCstF-64 cleavage stimulation factor, 3' pre-RNA subunit 2, tau protein-coding common_peak1_30_222_-0.334217695185998_7.63379105232731_1.40544136066143 chr17 44075786 44076174 + 1.40544136066143 NA Intergenic Intergenic -2866 NM_032003 83965 Mm.30145 NM_032003 ENSMUSG00000023960 Enpp5 AW061004|D17Abb1e|E-NPP 5 ectonucleotide pyrophosphatase/phosphodiesterase 5 protein-coding common_peak2_30_222_-0.334217695185998_7.63379105232731_1.40544136066143 chr14 27187155 27188642 + 1.40544136066143 NA intron (NM_001289686, intron 2 of 12) Lx8|LINE|L1 43905 NM_001289686 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_35_261_-0.302125328478427_7.88236033729824_1.40527330792898 chr2 144440720 144442137 + 1.40527330792898 NA Intergenic Intergenic -17852 NR_033459 668917 Mm.152805 NR_033459 ENSMUSG00000083674 Zfp133-ps OTTMUSG00000003825|Zfp133 zinc finger protein 133, pseudogene pseudo unique_peak2_17_124_-0.46109892278942_6.73523482326738_1.40526584290154-2 chr3 84228172 84228883 + 1.40526584290154 NA intron (NM_001271726, intron 1 of 11) intron (NM_001271726, intron 1 of 11) -7650 NM_030706 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding unique_peak2_17_124_-0.46109892278942_6.73523482326738_1.40526584290154 chr14 79547766 79548624 + 1.40526584290154 NA intron (NM_001286411, intron 2 of 8) MTB|LTR|ERVL-MaLR 32521 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak1_17_124_-0.46109892278942_6.73523482326738_1.40526584290154-2 chr9 25186181 25186580 + 1.40526584290154 NA Intergenic Intergenic -34599 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding common_peak1_17_124_-0.46109892278942_6.73523482326738_1.40526584290154 chr17 29511436 29511901 + 1.40526584290154 NA Intergenic RMER10A|LTR|ERVL 20623 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_98_824_-0.166795845319013_9.60485238647367_1.40491632171339 chrX 23693030 23694014 + 1.40491632171339 NA exon (NM_175180, exon 1 of 20) exon (NM_175180, exon 1 of 20) 471 NM_001305675 72404 Mm.423 NM_175180 ENSMUSG00000036769 Wdr44 2610034K17Rik|RAB11BP|RPH11 WD repeat domain 44 protein-coding common_peak2_134_973_0.142535191635574_9.99904555790013_1.40461144893121 chr5 64159480 64162067 + 1.40461144893121 NA intron (NM_001310611, intron 1 of 21) intron (NM_001310611, intron 1 of 21) 513 NM_001310611 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding unique_peak2_20_146_-0.422197701037867_6.98857349431743_1.40399007774227 chr1 37307183 37308334 + 1.40399007774227 NA intron (NM_001290797, intron 1 of 25) intron (NM_001290797, intron 1 of 25) 7920 NM_001290797 269180 Mm.5294 NM_030266 ENSMUSG00000026113 Inpp4a 107kDa|9630012D15|D130048C09Rik|R74740 inositol polyphosphate-4-phosphatase, type I protein-coding common_peak1_20_146_-0.422197701037867_6.98857349431743_1.40399007774227 chr19 7569271 7569797 + 1.40399007774227 NA intron (NM_139269, intron 2 of 4) intron (NM_139269, intron 2 of 4) 12075 NM_139269 225845 Mm.274810 NM_139269 ENSMUSG00000060675 Pla2g16 C78643|HRSL3|Hrasls3|Hrev107|MLP-3 phospholipase A2, group XVI protein-coding common_peak1_53_292_0.254063023603702_8.3217883662241_1.40312692640602-2 chr16 52055999 52056903 + 1.40312692640602 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 24902 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_53_292_0.254063023603702_8.3217883662241_1.40312692640602 chr15 60126338 60127121 + 1.40312692640602 NA Intergenic Intergenic -110111 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_70_562_-0.203831566233212_9.03507532896362_1.40294235408826 chr10 23786362 23787345 + 1.40294235408826 NA exon (NM_011295, exon 3 of 6) exon (NM_011295, exon 3 of 6) 356 NM_011295 20042 Mm.371846 NM_011295 ENSMUSG00000061983 Rps12 - ribosomal protein S12 protein-coding common_peak1_50_271_0.260207935877117_8.2175668091889_1.40287717193948 chr1 180847984 180848905 + 1.40287717193948 NA Intergenic Intergenic -2707 NM_145943 208768 Mm.272625 NM_145943 ENSMUSG00000038806 Sde2 - SDE2 telomere maintenance homolog (S. pombe) protein-coding common_peak2_50_271_0.260207935877117_8.2175668091889_1.40287717193948 chr17 46110490 46111607 + 1.40287717193948 NA promoter-TSS (NM_026768) promoter-TSS (NM_026768) 44 NM_026768 68565 Mm.287443 NM_026768 ENSMUSG00000023967 Mrps18a 1110004O20Rik|C79712 mitochondrial ribosomal protein S18A protein-coding common_peak1_56_314_0.245290701162894_8.42185336896873_1.40266241653797 chr5 34541844 34542916 + 1.40266241653797 NA promoter-TSS (NM_001145858) promoter-TSS (NM_001145858) -985 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak1_308_2798_0.0849866283571075_11.4931890857515_1.4022148818057 chr10 22301167 22303790 + 1.4022148818057 NA intron (NM_009018, intron 5 of 5) RMER15|LTR|ERVL -4242 NR_015465 606736 Mm.387042 NR_015465 ENSMUSG00000097352 C920009B18Rik - RIKEN cDNA C920009B18 gene ncRNA common_peak2_43_222_0.285510153960002_7.94365497690031_1.40183731073286 chr1 153722506 153723627 + 1.40183731073286 NA non-coding (NR_046171, exon 3 of 3) non-coding (NR_046171, exon 3 of 3) 14763 NR_046171 329271 Mm.384841 NR_046171 ENSMUSG00000100334 C230024C17Rik C230024C17 RIKEN cDNA C230024C17 gene ncRNA common_peak2_43_222_0.285510153960002_7.94365497690031_1.40183731073286-2 chr17 65950485 65951336 + 1.40183731073286 NA intron (NM_023053, intron 1 of 4) CpG 277 NM_023053 65960 Mm.10153 NM_023053 ENSMUSG00000024098 Twsg1 1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg twisted gastrulation BMP signaling modulator 1 protein-coding common_peak1_314_2867_0.0838854381281973_11.527772027766_1.40140737407403 chr17 31057286 31059589 + 1.40140737407403 NA intron (NM_009593, intron 1 of 14) intron (NM_009593, intron 1 of 14) 743 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak1_29_131_0.36426231323925_7.22652527597808_1.40139988198718 chr3 142395797 142396282 + 1.40139988198718 NA promoter-TSS (NM_001190852) promoter-TSS (NM_001190852) -343 NM_019808 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak1_29_131_0.36426231323925_7.22652527597808_1.40139988198718-2 chr4 53439706 53440365 + 1.40139988198718 NA promoter-TSS (NM_133891) promoter-TSS (NM_133891) -378 NM_001159633 100434 Mm.482207 NM_133891 ENSMUSG00000028412 Slc44a1 2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92 solute carrier family 44, member 1 protein-coding common_peak2_82_672_-0.184956825441969_9.30198428188933_1.40124491886819 chr9 50602967 50604603 + 1.40124491886819 NA promoter-TSS (NM_025848) promoter-TSS (NM_025848) 64 NM_025848 66925 Mm.10406 NM_025848 ENSMUSG00000000171 Sdhd 3110001M13Rik|AVLL5809|C78570|PRO19626 succinate dehydrogenase complex, subunit D, integral membrane protein protein-coding common_peak1_480_4884_0.0646457194304961_12.286465706571_1.40120092556939 chr5 72748404 72752804 + 1.40120092556939 NA intron (NM_001289495, intron 1 of 14) MLT1F2|LTR|ERVL-MaLR 2173 NM_001289494 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak2_145_1077_0.13478987481948_10.1415364001622_1.40100680708487 chr5 21784260 21787739 + 1.40100680708487 NA promoter-TSS (NM_009584) promoter-TSS (NM_009584) 716 NM_011188 19181 Mm.2462 NM_011188 ENSMUSG00000028932 Psmc2 - proteasome (prosome, macropain) 26S subunit, ATPase 2 protein-coding common_peak1_39_195_0.303036694701924_7.76622819146617_1.40081792770479 chr16 93787402 93788049 + 1.40081792770479 NA intron (NM_027293, intron 26 of 36) intron (NM_027293, intron 26 of 36) -44396 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak2_39_195_0.303036694701924_7.76622819146617_1.40081792770479 chr2 68465477 68467083 + 1.40081792770479 NA intron (NM_016866, intron 1 of 17) intron (NM_016866, intron 1 of 17) 5701 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding common_peak2_124_881_0.149485933457182_9.85937781228611_1.40058164233429 chr19 46654727 46657702 + 1.40058164233429 NA 3' UTR (NM_001177813, exon 4 of 4) 3' UTR (NM_001177813, exon 4 of 4) 16786 NM_007809 13074 Mm.1262 NM_007809 ENSMUSG00000003555 Cyp17a1 Cyp17|p450c17 cytochrome P450, family 17, subfamily a, polypeptide 1 protein-coding common_peak2_53_411_-0.237680649157268_8.56766020260459_1.4005593667062 chr3 69176831 69178389 + 1.4005593667062 NA Intergenic Intergenic -44809 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding common_peak1_53_411_-0.237680649157268_8.56766020260459_1.4005593667062 chr7 45128978 45129791 + 1.4005593667062 NA promoter-TSS (NM_009438) promoter-TSS (NM_009438) -639 NM_009438 22121 Mm.180458 NM_009438 ENSMUSG00000074129 Rpl13a 1810026N22Rik|Tstap198-7|tum-antigen ribosomal protein L13A protein-coding common_peak1_56_437_-0.230288340051001_8.65964288957567_1.40024341249759 chr6 121272133 121272944 + 1.40024341249759 NA Intergenic ORR1D1|LTR|ERVL-MaLR 26632 NM_011909 24110 Mm.326911 NM_011909 ENSMUSG00000030107 Usp18 1110058H21Rik|AW047653|UBP43|Ubp15 ubiquitin specific peptidase 18 protein-coding common_peak2_43_327_-0.271141950737777_8.2219810292492_1.39918780440694 chr4 102510856 102512122 + 1.39918780440694 NA intron (NM_019840, intron 5 of 14) intron (NM_019840, intron 5 of 14) -58571 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak1_43_327_-0.271141950737777_8.2219810292492_1.39918780440694 chr7 137437593 137438408 + 1.39918780440694 NA intron (NR_033611, intron 1 of 10) CpG 326 NR_033611 620016 Mm.388932 NR_033611 ENSMUSG00000100863 Gm12669 OTTMUSG00000007920 glutaredoxin 3 pseudogene pseudo common_peak1_280_2808_-0.0882494219253367_11.4117161981637_1.39912814789105 chr3 30601321 30603433 + 1.39912814789105 NA 5' UTR (NM_030557, exon 1 of 8) 5' UTR (NM_030557, exon 1 of 8) 290 NM_001289621 80732 Mm.200378 NM_030557 ENSMUSG00000037730 Mynn 2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1 myoneurin protein-coding common_peak2_206_1683_0.109053413333683_10.7722031297332_1.39907030363536 chr1 134493718 134495968 + 1.39907030363536 NA intron (NM_145510, intron 1 of 1) CpG 183 NM_145510 98710 Mm.198119 NM_145510 ENSMUSG00000042229 Rabif AI842864|AW549708|E130318E12Rik|MSS4|RASGFR3 RAB interacting factor protein-coding common_peak2_196_1843_-0.109516323804039_10.7938647785273_1.39900895010487 chr16 17451097 17453081 + 1.39900895010487 NA 5' UTR (NM_007764, exon 1 of 3) 5' UTR (NM_007764, exon 1 of 3) 104 NM_007764 12929 Mm.21048 NM_007764 ENSMUSG00000006134 Crkl 1110025F07Rik|AA589403|AI325100|Crkol v-crk avian sarcoma virus CT10 oncogene homolog-like protein-coding common_peak1_29_214_-0.339536416991757_7.57842464109358_1.39822230453434 chr18 12640150 12640595 + 1.39822230453434 NA Intergenic Intergenic -3161 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding common_peak1_39_294_-0.286824605432072_8.06115884153317_1.39821410467177 chr17 33824415 33825102 + 1.39821410467177 NA promoter-TSS (NM_016844) promoter-TSS (NM_016844) 113 NR_103514 66416 Mm.29513 NM_023202 ENSMUSG00000041881 Ndufa7 14.5kDa|2400007M02Rik|CI-B14.5a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a) protein-coding common_peak2_118_1020_-0.148694780638158_9.92141976055872_1.3979819990938 chr5 24450637 24452977 + 1.3979819990938 NA promoter-TSS (NM_139153) promoter-TSS (NM_139153) -370 NM_139153 213990 Mm.250703 NM_139153 ENSMUSG00000023353 Agap3 AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding common_peak1_67_535_-0.209328307110889_8.96142503690233_1.39768928504639-2 chr16 50731924 50732873 + 1.39768928504639 NA intron (NR_028300, intron 1 of 1) intron (NR_028300, intron 1 of 1) 375 NR_028300 68190 Mm.139089 NR_028300 Dubr 5330426P16Rik|Dum Dppa2 upstream binding RNA ncRNA common_peak1_67_535_-0.209328307110889_8.96142503690233_1.39768928504639 chr10 77259222 77260001 + 1.39768928504639 NA promoter-TSS (NR_026944) promoter-TSS (NR_026944) 311 NM_030262 80294 Mm.203556 NM_030262 ENSMUSG00000020260 Pofut2 2310011G23Rik|AI256847|BC003494|C21orf80|FUT13 protein O-fucosyltransferase 2 protein-coding common_peak2_34_162_0.332717560292457_7.51508693437731_1.3975666961641 chr10 118486392 118487518 + 1.3975666961641 NA Intergenic Intergenic 45909 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak2_34_162_0.332717560292457_7.51508693437731_1.3975666961641-2 chr11 100626320 100627462 + 1.3975666961641 NA 3' UTR (NM_028024, exon 4 of 4) 3' UTR (NM_028024, exon 4 of 4) 3936 NM_028024 71966 Mm.274734 NM_028024 ENSMUSG00000017837 Nkiras2 2410003M04Rik|4930527H08Rik|D630018G21Rik|KBRAS2 NFKB inhibitor interacting Ras-like protein 2 protein-coding common_peak1_34_162_0.332717560292457_7.51508693437731_1.3975666961641 chr1 21380566 21381394 + 1.3975666961641 NA Intergenic Intergenic -2576 NM_001113187 98582 Mm.326336 NM_001113187 ENSMUSG00000085079 Khdc1b AU014713|AU015226|AU024076|AY238603|C85331|C86372|C88118|Khdc1|Khdc1c KH domain containing 1B protein-coding common_peak1_267_2337_0.09270910799078_11.237413768527_1.3953186934296 chr2 91961311 91963640 + 1.3953186934296 NA intron (NM_138306, intron 1 of 30) intron (NM_138306, intron 1 of 30) 1088 NM_138306 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding common_peak1_159_1211_0.127797177716893_10.3070725723314_1.39518072555275 chr12 51843962 51845569 + 1.39518072555275 NA Intergenic Intergenic -15229 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak1_95_795_-0.169624530078842_9.55181235550423_1.39517938275557 chr7 127588386 127589391 + 1.39517938275557 NA promoter-TSS (NM_001033040) promoter-TSS (NM_001033040) 190 NM_172281 233900 Mm.41122 NM_172281 ENSMUSG00000030816 Rnf40 AI848422|mKIAA0661 ring finger protein 40 protein-coding common_peak2_95_795_-0.169624530078842_9.55181235550423_1.39517938275557 chr9 18291482 18293816 + 1.39517938275557 NA intron (NM_025844, intron 1 of 10) intron (NM_025844, intron 1 of 10) 382 NM_025844 66917 Mm.103534 NM_025844 ENSMUSG00000001774 Chordc1 1110001O09Rik|AA409036|Chp-1|morgana cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 protein-coding common_peak1_97_643_0.172571669982423_9.41720271310583_1.39441578276488 chr7 66174234 66175970 + 1.39441578276488 NA Intergenic Intergenic 65587 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_10_75_-0.614742081935989_5.94055647247559_1.39412279883296 chr12 104983628 104984296 + 1.39412279883296 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 14715 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_10_75_-0.614742081935989_5.94055647247559_1.39412279883296 chr18 44380022 44380300 + 1.39412279883296 NA promoter-TSS (NM_027490) promoter-TSS (NM_027490) -339 NM_027490 70640 Mm.87629 NM_027490 ENSMUSG00000024472 Dcp2 2410015D23Rik|5730537H01Rik|AL118268 decapping mRNA 2 protein-coding common_peak1_46_243_0.272393749863131_8.06693421249445_1.39412255231655 chr14 105272503 105273522 + 1.39412255231655 NA intron (NM_001190989, intron 1 of 7) intron (NM_001190989, intron 1 of 7) 14339 NM_001190989 76273 Mm.290669 NM_029561 ENSMUSG00000053253 Ndfip2 0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165 Nedd4 family interacting protein 2 protein-coding common_peak1_64_508_-0.214607325742799_8.8842181832043_1.39369599987654 chr19 53141368 53142446 + 1.39369599987654 NA promoter-TSS (NM_001164100) promoter-TSS (NM_001164100) -849 NM_001277100 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak2_69_413_0.214571068210565_8.80077249160461_1.39362861050312 chr14 71112245 71114584 + 1.39362861050312 NA Intergenic Lx5b|LINE|L1 -137859 NR_046075 100043132 Mm.399336 NR_046075 Gm4251 - predicted gene 4251 ncRNA common_peak2_222_1851_0.103615490694168_10.9066761286073_1.39356268651748 chr3 103789456 103792057 + 1.39356268651748 NA intron (NM_001301304, intron 1 of 15) intron (NM_001301304, intron 1 of 15) 519 NM_001301306 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding common_peak2_222_2134_-0.101536480553449_11.0092521142311_1.39309610225736 chr18 67244669 67246562 + 1.39309610225736 NA 5' UTR (NM_172630, exon 1 of 11) 5' UTR (NM_172630, exon 1 of 11) 215 NM_172630 225651 Mm.235792 NM_172630 ENSMUSG00000062526 Mppe1 A530095G11 metallophosphoesterase 1 protein-coding common_peak1_217_1798_0.10537507546451_10.8656670089837_1.39306105638494 chr18 3280014 3282287 + 1.39306105638494 NA promoter-TSS (NM_001311067) promoter-TSS (NM_001311067) -18 NM_001311067 12916 Mm.5244 NM_013498 ENSMUSG00000063889 Crem ICER|ICERI cAMP responsive element modulator protein-coding unique_peak2_28_125_0.371383391012651_7.16297161900624_1.39296341608433 chr8 27259841 27260933 + 1.39296341608433 NA promoter-TSS (NM_007918) promoter-TSS (NM_007918) 60 NM_007918 13685 Mm.6700 NM_007918 ENSMUSG00000031490 Eif4ebp1 4e-bp1|AA959816|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding common_peak1_28_125_0.371383391012651_7.16297161900624_1.39296341608433-2 chr17 79584519 79585133 + 1.39296341608433 NA Intergenic ORR1A2|LTR|ERVL-MaLR -30074 NM_201361 381110 Mm.209801 NM_201361 ENSMUSG00000036368 Rmdn2 AW061290|Fam82a1|RMD-2|mRMD-2 regulator of microtubule dynamics 2 protein-coding common_peak1_28_125_0.371383391012651_7.16297161900624_1.39296341608433 chr1 53823503 53823957 + 1.39296341608433 NA intron (NM_001001883, intron 28 of 28) intron (NM_001001883, intron 28 of 28) -25694 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA common_peak1_46_352_-0.260393285845163_8.3333277303486_1.39287985547078 chr11 70198735 70199445 + 1.39287985547078 NA Intergenic ORSL-2b|DNA|hAT-Tip100 -14820 NM_153081 216867 Mm.289238 NM_153081 ENSMUSG00000040938 Slc16a11 AB041591|MCT 11|MNCb-2717 solute carrier family 16 (monocarboxylic acid transporters), member 11 protein-coding common_peak2_166_1517_-0.121209469727507_10.5073513405517_1.39274562676732 chr3 108443422 108446026 + 1.39274562676732 NA intron (NM_011319, intron 1 of 11) intron (NM_011319, intron 1 of 11) 535 NM_011319 20226 Mm.28688 NM_011319 ENSMUSG00000068739 Sars Sars1|Strs|serRS seryl-aminoacyl-tRNA synthetase protein-coding common_peak2_99_833_-0.164663758935568_9.62157169397688_1.39230299607066 chr3 153943501 153945420 + 1.39230299607066 NA 5' UTR (NM_007382, exon 1 of 12) 5' UTR (NM_007382, exon 1 of 12) 183 NM_007382 11364 Mm.10530 NM_007382 ENSMUSG00000062908 Acadm AU018656|MCAD acyl-Coenzyme A dehydrogenase, medium chain protein-coding common_peak2_74_453_0.203601220998753_8.92834909779029_1.3921525104159 chr16 10978760 10980618 + 1.3921525104159 NA intron (NM_019980, intron 1 of 3) MLT-int|LTR|ERVL-MaLR 13432 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak1_38_188_0.310701025386788_7.71759293691447_1.39202015558293-2 chr2 32235854 32236536 + 1.39202015558293 NA promoter-TSS (NM_145145) promoter-TSS (NM_145145) -488 NM_145145 99011 Mm.31192 NM_145145 ENSMUSG00000039254 Pomt1 AI505244 protein-O-mannosyltransferase 1 protein-coding common_peak1_38_188_0.310701025386788_7.71759293691447_1.39202015558293-3 chr4 129034620 129035397 + 1.39202015558293 NA Intergenic Intergenic -23263 NM_029219 75234 Mm.259672 NM_029219 ENSMUSG00000028793 Rnf19b 4930534K13Rik|4930555L03Rik|Ibrdc3 ring finger protein 19B protein-coding common_peak1_38_188_0.310701025386788_7.71759293691447_1.39202015558293 chr17 71195097 71195762 + 1.39202015558293 NA intron (NM_022882, intron 1 of 19) intron (NM_022882, intron 1 of 19) -9225 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak2_88_567_0.183271249259507_9.24138274413443_1.39181983815116 chr4 133369480 133370607 + 1.39181983815116 NA TTS (NR_039582) TTS (NR_039582) 267 NR_039582 100628620 NR_039582 ENSMUSG00000092745 Mir5122 mmu-mir-5122|mu-mir-5122 microRNA 5122 ncRNA common_peak1_88_567_0.183271249259507_9.24138274413443_1.39181983815116 chr12 102611998 102613305 + 1.39181983815116 NA intron (NM_172584, intron 3 of 9) intron (NM_172584, intron 3 of 9) 57682 NM_007693 12652 Mm.4137 NM_007693 ENSMUSG00000021194 Chga ChrA|cgA chromogranin A protein-coding unique_peak2_28_206_-0.344823642986757_7.52107513600595_1.39159619687071 chr13 6547539 6548982 + 1.39159619687071 NA intron (NM_145131, intron 1 of 26) CpG 103 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding common_peak2_28_206_-0.344823642986757_7.52107513600595_1.39159619687071 chr8 117224556 117225238 + 1.39159619687071 NA Intergenic Intergenic -32122 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_74_598_-0.196262484499119_9.12828095053923_1.39145471867613 chr6 108167248 108169367 + 1.39145471867613 NA intron (NM_145937, intron 3 of 8) ORR1E|LTR|ERVL-MaLR 17276 NM_145937 58911 Mm.439876 NM_145937 ENSMUSG00000030101 Sumf1 AA543204|AI463102|AI851573|FGE sulfatase modifying factor 1 protein-coding common_peak2_293_2963_-0.0857066680555114_11.4904763982781_1.3914518029888 chr11 101551239 101553910 + 1.3914518029888 NA promoter-TSS (NM_008676) promoter-TSS (NM_008676) -80 NM_001252222 17966 Mm.784 NM_008676 ENSMUSG00000017119 Nbr1 mKIAA0049 neighbor of Brca1 gene 1 protein-coding common_peak2_42_215_0.290839668090483_7.90030733620871_1.39139256862579 chr1 86306206 86307771 + 1.39139256862579 NA 3' UTR (NM_145222, exon 2 of 2) 3' UTR (NM_145222, exon 2 of 2) 3767 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak1_387_4126_-0.072314737270915_11.9747203543716_1.39081725986637 chr12 69445831 69449055 + 1.39081725986637 NA Intergenic Intergenic 28107 NR_038060 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak1_42_318_-0.271685443510918_8.18156989200941_1.39057125455094 chr1 5082990 5083658 + 1.39057125455094 NA intron (NM_001310442, intron 1 of 12) CpG 238 NM_001310442 108664 Mm.27082 NM_133826 ENSMUSG00000033793 Atp6v1h 0710001F19Rik|AU022349|CGI-11|SFD|SFDalpha|SFDbeta|VMA13 ATPase, H+ transporting, lysosomal V1 subunit H protein-coding common_peak2_49_264_0.262778953872179_8.18123802638665_1.39057125455084 chr9 123717070 123718214 + 1.39057125455084 NA promoter-TSS (NM_033322) promoter-TSS (NM_033322) -85 NM_033322 93730 Mm.378263 NM_033322 ENSMUSG00000025245 Lztfl1 5530402H04Rik|6130400H19Rik|AI414725|AW048545 leucine zipper transcription factor-like 1 protein-coding common_peak1_49_264_0.262778953872179_8.18123802638665_1.39057125455084 chr6 56704116 56704687 + 1.39057125455084 NA intron (NM_025520, intron 1 of 4) intron (NM_025520, intron 1 of 4) 298 NM_025520 66373 Mm.25642 NM_025520 ENSMUSG00000091625 Lsm5 2010208O10Rik|2310034K10Rik LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_52_285_0.255870428664723_8.28780655111075_1.39030303045452 chr11 32550380 32551342 + 1.39030303045452 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 17595 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_81_662_-0.184809483860805_9.28046031818219_1.39028849837191 chr9 111148133 111150643 + 1.39028849837191 NA intron (NM_001164838, intron 3 of 14) L2|LINE|L2 31277 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding common_peak2_257_2228_0.0942930963338355_11.1693274494267_1.3899796625201 chr17 25246403 25250536 + 1.3899796625201 NA intron (NM_001163270, intron 13 of 33) intron (NM_001163270, intron 13 of 33) -2831 NR_105931 102465583 NR_105931 ENSMUSG00000093202 Mir3547 Gm22410|mmu-mir-3547 microRNA 3547 ncRNA common_peak2_49_377_-0.249614920898331_8.43743496377191_1.38995097463549 chr3 109026649 109028352 + 1.38995097463549 NA 5' UTR (NM_001163567, exon 1 of 11) 5' UTR (NM_001163567, exon 1 of 11) 107 NM_001163567 329739 Mm.69013 NM_001163567 ENSMUSG00000040339 Fam102b 1600010D10Rik|B430201A12Rik family with sequence similarity 102, member B protein-coding common_peak2_52_402_-0.238894263084855_8.53518889698554_1.38974472629343 chr17 15023586 15025075 + 1.38974472629343 NA Intergenic CpG -14146 NM_198104 21647 Mm.440445 NM_011560 ENSMUSG00000079707 Tcte3 D17Leh117c|LC2|Tcte-3|Tctex-2|Tctex-4|Tctex2|Tctex4 t-complex-associated testis expressed 3 protein-coding common_peak1_103_695_0.165702371164915_9.52579468143119_1.38973659315511 chr3 53862932 53864097 + 1.38973659315511 NA intron (NM_026435, intron 2 of 5) intron (NM_026435, intron 2 of 5) 293 NM_026435 67890 Mm.23067 NM_026435 ENSMUSG00000027746 Ufm1 1810045K17Rik|AI132708|AI463323|ENSMUSG00000074598|Gm10726 ubiquitin-fold modifier 1 protein-coding common_peak1_55_307_0.246390520509379_8.38998180094959_1.38941238779832 chrX 103164960 103165586 + 1.38941238779832 NA Intergenic (CCG)n|Simple_repeat|Simple_repeat 21391 NM_008671 17954 Mm.388694 NM_008671 ENSMUSG00000082229 Nap1l2 Bpx nucleosome assembly protein 1-like 2 protein-coding common_peak2_55_307_0.246390520509379_8.38998180094959_1.38941238779832 chr5 65335029 65335961 + 1.38941238779832 NA intron (NM_011258, intron 1 of 24) CpG 144 NM_011258 19687 Mm.148877 NM_011258 ENSMUSG00000029191 Rfc1 140kDa|Alp145|RFC140|Recc1 replication factor C (activator 1) 1 protein-coding common_peak1_55_428_-0.231656776295264_8.62900544935191_1.38900767859212 chr7 118115249 118116131 + 1.38900767859212 NA intron (NM_170669, intron 1 of 4) intron (NM_170669, intron 1 of 4) 457 NM_170669 267019 Mm.288212 NM_170669 ENSMUSG00000008683 Rps15a A630031B11Rik ribosomal protein S15A protein-coding common_peak1_90_584_0.180052228249281_9.28231892859541_1.38853914691151 chr1 44101615 44102628 + 1.38853914691151 NA intron (NM_029368, intron 1 of 7) CpG 267 NM_029368 75623 Mm.348017 NM_029368 ENSMUSG00000026049 Tex30 1700029F09Rik|3110030D08Rik testis expressed 30 protein-coding common_peak1_58_330_0.234838998234608_8.48810690592452_1.38802634325462 chr11 80071944 80073067 + 1.38802634325462 NA intron (NM_018776, intron 1 of 7) intron (NM_018776, intron 1 of 7) 8486 NM_001277106 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding common_peak1_58_455_-0.227363609122916_8.71920820960328_1.38783948855894 chr11 82205512 82206396 + 1.38783948855894 NA Intergenic MIRb|SINE|MIR -26142 NM_011329 20290 Mm.1283 NM_011329 ENSMUSG00000020702 Ccl1 BF534335|I-309|Scya1|Tca-3 chemokine (C-C motif) ligand 1 protein-coding common_peak1_66_390_0.219518902842371_8.72078424872854_1.38783948855894 chr7 80260836 80261955 + 1.38783948855894 NA TTS (NM_177765) TTS (NM_177765) 180 NM_031375 83485 Mm.21175 NM_031375 ENSMUSG00000047084 Ngrn AW552001 neugrin, neurite outgrowth associated protein-coding common_peak2_58_455_-0.227363609122916_8.71920820960328_1.38783948855894 chr2 167270113 167272538 + 1.38783948855894 NA Intergenic Intergenic -30788 NM_008968 19223 Mm.2339 NM_008968 ENSMUSG00000017969 Ptgis Cyp8|Cyp8a1|Pgis prostaglandin I2 (prostacyclin) synthase protein-coding common_peak2_188_1499_0.114996890721823_10.6082452307442_1.38775178891266 chr14 26533299 26535203 + 1.38775178891266 NA 5' UTR (NM_032008, exon 1 of 23) 5' UTR (NM_032008, exon 1 of 23) 373 NM_032008 83997 Mm.36769 NM_032008 ENSMUSG00000021870 Slmap D330001L02Rik|Miranda|Slap|mKIAA1601 sarcolemma associated protein protein-coding common_peak1_66_525_-0.208375289142579_8.93473134472101_1.38769133483405 chr2 180070205 180071364 + 1.38769133483405 NA TTS (NM_178750) TTS (NM_178750) 191 NM_001083329 52856 Mm.219658 NM_028422 ENSMUSG00000039069 Mtg2 1810011P19Rik|2900056P18Rik|D2Bwg0647e|Gtpbp5 mitochondrial ribosome associated GTPase 2 protein-coding unique_peak1_11_34_0.657880139960773_5.45822308692535_1.38722011998117 chr1 167245087 167245448 + 1.38722011998117 NA intron (NM_030724, intron 1 of 6) intron (NM_030724, intron 1 of 6) 39860 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding unique_peak2_7_55_-0.737713970118792_5.43849793699821_1.38722011998117 chr2 153825954 153826431 + 1.38722011998117 NA Intergenic Intergenic 44892 NM_001305048 76407 Mm.33629 NM_029599 ENSMUSG00000027480 Sun5 1700021O15Rik|SPAG4L-2|SRG4|Spag4l Sad1 and UNC84 domain containing 5 protein-coding unique_peak2_11_81_-0.570388847712344_6.07235758076191_1.38705231896991 chr16 10383945 10384597 + 1.38705231896991 NA intron (NM_001291001, intron 3 of 6) intron (NM_001291001, intron 3 of 6) 11177 NM_001099275 70426 Mm.142181 NM_001099275 ENSMUSG00000039179 Tekt5 3300001K11Rik tektin 5 protein-coding common_peak2_294_2640_0.086763405753052_11.4102502890436_1.38693242864561 chr3 101602818 101605314 + 1.38693242864561 NA intron (NM_144900, intron 1 of 22) CpG 641 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak2_76_616_-0.192405138376351_9.17292410996124_1.38679777922121 chr7 29905543 29906999 + 1.38679777922121 NA promoter-TSS (NM_011754) promoter-TSS (NM_011754) -167 NM_001037707 22689 Mm.86747 NM_011754 ENSMUSG00000062040 Zfp27 Zfp-27|mkr-4|mszf76 zinc finger protein 27 protein-coding common_peak1_76_616_-0.192405138376351_9.17292410996124_1.38679777922121 chr3 108554099 108554771 + 1.38679777922121 NA promoter-TSS (NR_028538) promoter-TSS (NR_028538) -33 NR_028538 100217438 NR_028538 Scarna2 MBII-382 small Cajal body-specific RNA 2 ncRNA common_peak2_115_801_0.154429510430361_9.7246731816701_1.38653106639326-2 chr2 119155944 119157720 + 1.38653106639326 NA intron (NM_001033136, intron 1 of 12) CpG 202 NM_001033136 67809 Mm.475909 NM_001033136 ENSMUSG00000070730 Rmdn3 1200015F23Rik|AI131757|Fam82a2|Ptpip51|RMD-3|Rmd3 regulator of microtubule dynamics 3 protein-coding common_peak2_115_801_0.154429510430361_9.7246731816701_1.38653106639326 chr15 60177606 60181024 + 1.38653106639326 NA Intergenic L1_Mus3|LINE|L1 -162697 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_71_429_0.20971713465592_8.85305141691742_1.38633586075209 chr6 50399055 50401393 + 1.38633586075209 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -17387 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_92_766_-0.172266046615343_9.49694974419526_1.38588994337819 chr15 96461169 96462000 + 1.38588994337819 NA promoter-TSS (NM_028148) promoter-TSS (NM_028148) -741 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak1_33_245_-0.312365933178713_7.78633153874988_1.38586569908157-2 chr15 99649479 99650018 + 1.38586569908157 NA intron (NM_012025, intron 1 of 17) L2a|LINE|L2 1908 NM_001253808 26934 Mm.273804 NM_012025 ENSMUSG00000023015 Racgap1 AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478 Rac GTPase-activating protein 1 protein-coding common_peak1_33_245_-0.312365933178713_7.78633153874988_1.38586569908157 chr11 108269137 108269801 + 1.38586569908157 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 74419 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_83_681_-0.182928662852962_9.32216359759769_1.38577703879269 chr1 170949897 170951441 + 1.38577703879269 NA Intergenic Intergenic -23086 NR_027666 98752 Mm.1850 NM_145141 ENSMUSG00000038421 Fcrla BB219290|FCRL|FCRL1|FREB|Fcrlm1|Fcrx|Freb1|mFREB|mFcrX Fc receptor-like A protein-coding common_peak1_33_156_0.3355278232689_7.46238466052608_1.38563871866357 chrX 75055622 75056249 + 1.38563871866357 NA intron (NM_181584, intron 1 of 9) B2_Mm1a|SINE|B2 28970 NM_181584 210710 Mm.267056 NM_181584 ENSMUSG00000032750 Gab3 5930433H21Rik growth factor receptor bound protein 2-associated protein 3 protein-coding unique_peak2_33_156_0.3355278232689_7.46238466052608_1.38563871866357 chr7 31126416 31127671 + 1.38563871866357 NA promoter-TSS (NM_011322) promoter-TSS (NM_011322) -98 NM_011322 20266 Mm.1418 NM_011322 ENSMUSG00000019194 Scn1b - sodium channel, voltage-gated, type I, beta protein-coding common_peak2_376_3986_-0.0734196604099289_11.9243780597924_1.38503889809067 chr5 149050084 149053345 + 1.38503889809067 NA promoter-TSS (NM_001313894) promoter-TSS (NM_001313894) -98 NM_001313894 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding common_peak2_318_2914_0.0827645595525635_11.5506624478641_1.38416618568658 chr2 166328912 166333675 + 1.38416618568658 NA Intergenic Intergenic 57385 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 OTTMUSG00000001131 predicted gene 11468 ncRNA common_peak2_63_367_0.225915929440868_8.63651992077745_1.3835358668941 chr16 5232935 5234413 + 1.3835358668941 NA promoter-TSS (NM_145362) promoter-TSS (NM_145362) 53 NM_145362 208211 Mm.34581 NM_145362 ENSMUSG00000039427 Alg1 HMAT1|HMT1 asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase) protein-coding common_peak2_63_367_0.225915929440868_8.63651992077745_1.3835358668941-2 chr6 30693012 30694054 + 1.3835358668941 NA intron (NR_130775, intron 1 of 2) CpG 216 NM_031998 83922 Mm.65389 NM_031998 ENSMUSG00000029790 Cep41 1700017E11Rik|2810431D15Rik|Tsga14 centrosomal protein 41 protein-coding common_peak2_216_2065_-0.102406224865284_10.9614214264324_1.38350774193536 chr11 95383916 95385696 + 1.38350774193536 NA promoter-TSS (NM_016752) promoter-TSS (NM_016752) -116 NM_016752 110172 Mm.4593 NM_016752 ENSMUSG00000020873 Slc35b1 Ugalt2 solute carrier family 35, member B1 protein-coding common_peak2_191_1530_0.113353834151376_10.6369354845755_1.38336797949972 chr11 60416250 60418418 + 1.38336797949972 NA promoter-TSS (NM_145427) promoter-TSS (NM_145427) 189 NM_025757 66771 Mm.29950 NM_025757 ENSMUSG00000018415 Gid4 4933439F18Rik GID complex subunit 4, VID24 homolog protein-coding common_peak2_147_1315_-0.128935500151117_10.2974760236597_1.38315623979489 chr3 94836834 94839101 + 1.38315623979489 NA intron (NM_001165948, intron 1 of 18) CpG 400 NM_172683 229584 Mm.274787 NM_172683 ENSMUSG00000038902 Pogz 9530006B08Rik pogo transposable element with ZNF domain protein-coding common_peak2_172_1580_-0.117411120865821_10.5679160919255_1.38305808826611 chr1 151687796 151691281 + 1.38305808826611 NA exon (NM_022018, exon 6 of 14) exon (NM_022018, exon 6 of 14) -65836 NM_001311165 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding common_peak2_229_2213_-0.0992608046233681_11.0628091044699_1.38271427075369 chr3 96239144 96241162 + 1.38271427075369 NA exon (NM_178212, exon 1 of 1).2 exon (NM_178212, exon 1 of 1).2 181 NM_013549 15267 Mm.5220 NM_013549 ENSMUSG00000064220 Hist2h2aa1 AI448581|H2a-614|H2a-615|Hist2 histone cluster 2, H2aa1 protein-coding common_peak2_134_974_0.141054745080943_9.99978578117744_1.38254141738024 chr19 4011815 4013497 + 1.38254141738024 NA promoter-TSS (NM_133666) promoter-TSS (NM_133666) 99 NM_133666 17995 Mm.29842 NM_133666 ENSMUSG00000037916 Ndufv1 CI-51kD NADH dehydrogenase (ubiquinone) flavoprotein 1 protein-coding common_peak2_229_1926_0.101037845862463_10.962659779227_1.38242291523552 chr9 57631283 57635993 + 1.38242291523552 NA intron (NM_007783, intron 1 of 12) intron (NM_007783, intron 1 of 12) 12015 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak2_352_3311_0.077780253160638_11.7323770840796_1.38134630522355 chr14 70794431 70801113 + 1.38134630522355 NA Intergenic Intergenic 23391 NM_010071 13449 Mm.243323 NM_010071 ENSMUSG00000022102 Dok2 DokR|Frip docking protein 2 protein-coding common_peak2_98_823_-0.165046063369054_9.60397749549869_1.3809295483901 chr7 106269702 106272051 + 1.3809295483901 NA Intergenic L1_Mus3|LINE|L1 53652 NR_030720 668128 Mm.484022 NR_030720 Gm8989 EG668128|Gm21911 very large inducible GTPase 1 pseudogene pseudo common_peak2_163_1484_-0.12157932824999_10.4754575515631_1.38067788779953 chr10 80431659 80434780 + 1.38067788779953 NA intron (NM_001164152, intron 1 of 18) CpG 434 NM_001164150 21423 Mm.3406 NM_011548 ENSMUSG00000020167 Tcf3 A1|AA408400|ALF2|AW209082|E12|E12/E47|E2A|E47|KA1|ME2|Pan1|Pan2|TCF-3|Tcfe2a|VDIR|bHLHb21 transcription factor 3 protein-coding unique_peak2_26_190_-0.355221261196154_7.39981819743767_1.38043900937509 chr11 88233614 88235240 + 1.38043900937509 NA Intergenic Intergenic 30039 NM_001291271 64656 Mm.168680 NM_024174 ENSMUSG00000023723 Mrps23 D11Bwg1153e|MRP-S23|Rpms23|S23mt mitochondrial ribosomal protein S23 protein-coding common_peak1_26_190_-0.355221261196154_7.39981819743767_1.38043900937509 chr1 91352474 91353018 + 1.38043900937509 NA intron (NM_027551, intron 1 of 7) intron (NM_027551, intron 1 of 7) 1673 NM_027551 70788 Mm.68617 NM_027551 ENSMUSG00000026308 Klhl30 4631423F02Rik kelch-like 30 protein-coding common_peak1_219_1820_0.10400043378179_10.8825154238677_1.38033387050181 chr9 20491809 20493825 + 1.38033387050181 NA promoter-TSS (NM_001310742) promoter-TSS (NM_001310742) -71 NM_001110309 235028 Mm.297660 NM_146221 ENSMUSG00000059475 Zfp426 2900057C04Rik|KRAB1|Zfo61|Zfp68-rs1|Znf426|mKIAA4237 zinc finger protein 426 protein-coding common_peak1_98_652_0.170515282267733_9.4361968226803_1.38020911705537 chr8 117528272 117529835 + 1.38020911705537 NA intron (NM_172285, intron 2 of 32) intron (NM_172285, intron 2 of 32) 30762 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak1_145_1078_0.13345218808397_10.14220524353_1.38005747745114 chr10 99267853 99269634 + 1.38005747745114 NA Intergenic Intergenic 5512 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_154_1389_-0.126081375998243_10.3778284796117_1.37976282264255 chr2 154602804 154604516 + 1.37976282264255 NA promoter-TSS (NM_021534) promoter-TSS (NM_021534) 13 NM_021534 59038 Mm.24673 NM_021534 ENSMUSG00000000876 Pxmp4 3010018P03Rik|Pmp24 peroxisomal membrane protein 4 protein-coding common_peak2_60_472_-0.221176922292422_8.77510791219318_1.37937421071164 chr9 87254793 87256066 + 1.37937421071164 NA 5' UTR (NM_199316, exon 1 of 27) 5' UTR (NM_199316, exon 1 of 27) 103 NM_199316 382090 Mm.335338 NM_199316 ENSMUSG00000056919 Cep162 4922501C03Rik|mKIAA1009 centrosomal protein 162 protein-coding common_peak2_68_406_0.213710335980547_8.77574015225652_1.37937421071164 chr10 34127113 34128397 + 1.37937421071164 NA exon (NM_175449, exon 1 of 2) exon (NM_175449, exon 1 of 2) 217 NM_175449 215900 Mm.34479 NM_175449 ENSMUSG00000046031 Fam26f A630077B13Rik family with sequence similarity 26, member F protein-coding common_peak2_26_113_0.389317552674854_7.02754879050217_1.378568640909 chr5 140207322 140208074 + 1.378568640909 NA intron (NM_010752, intron 10 of 17) intron (NM_010752, intron 10 of 17) 113854 NM_010752 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding common_peak1_26_113_0.389317552674854_7.02754879050217_1.378568640909 chr15 85878655 85879146 + 1.378568640909 NA promoter-TSS (NM_028063) promoter-TSS (NM_028063) -427 NM_028063 72026 Mm.158211 NM_028063 ENSMUSG00000022386 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding common_peak2_26_113_0.389317552674854_7.02754879050217_1.378568640909-2 chr6 48395550 48396310 + 1.378568640909 NA intron (NM_133922, intron 1 of 17) CpG 344 NM_133922 77827 Mm.107646 NM_133922 ENSMUSG00000042810 Krba1 A930040G15Rik|AI448780 KRAB-A domain containing 1 protein-coding unique_peak2_26_113_0.389317552674854_7.02754879050217_1.378568640909 chr9 119977799 119978838 + 1.378568640909 NA intron (NM_153287, intron 1 of 4) intron (NM_153287, intron 1 of 4) 6340 NM_153287 215418 Mm.491094 NM_153287 ENSMUSG00000032515 Csrnp1 4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3 cysteine-serine-rich nuclear protein 1 protein-coding common_peak2_41_310_-0.276683815145748_8.14242886255773_1.37838092963071 chr6 88445850 88446996 + 1.37838092963071 NA exon (NM_023060, exon 1 of 7) exon (NM_023060, exon 1 of 7) 116 NM_023060 65967 Mm.333237 NM_023060 ENSMUSG00000033216 Eefsec Selb|sec eukaryotic elongation factor, selenocysteine-tRNA-specific protein-coding common_peak1_41_310_-0.276683815145748_8.14242886255773_1.37838092963071 chr6 112945070 112945910 + 1.37838092963071 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 1776 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding unique_peak2_41_310_-0.276683815145748_8.14242886255773_1.37838092963071 chr3 135718116 135719552 + 1.37838092963071 NA Intergenic Intergenic -27287 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_48_257_0.265648981487431_8.14405174616697_1.37838092963061 chr3 152346090 152347270 + 1.37838092963061 NA intron (NM_001076676, intron 1 of 23) CpG 202 NM_001076676 170822 Mm.258320 NM_133247 ENSMUSG00000025437 Usp33 9830169D19Rik|AA409780|Vdu1 ubiquitin specific peptidase 33 protein-coding common_peak1_54_419_-0.232954499280208_8.59776826802602_1.37783970948967 chr18 80545527 80546871 + 1.37783970948967 NA Intergenic Intergenic -1653 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_217_1799_0.104573355498955_10.8660678689665_1.37688533424349 chr11 69893808 69896392 + 1.37688533424349 NA intron (NM_153788, intron 1 of 21) B1F|SINE|Alu 439 NM_153788 216859 Mm.288671 NM_153788 ENSMUSG00000001588 Acap1 Centb1 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 protein-coding common_peak1_32_237_-0.317497815647064_7.73606885548441_1.37666615092092 chr1 138137911 138138605 + 1.37666615092092 NA intron (NM_001268286, intron 2 of 28) ID_B1|SINE|B4 36868 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak2_32_237_-0.317497815647064_7.73606885548441_1.37666615092092 chr9 121958091 121959690 + 1.37666615092092 NA intron (NM_001199927, intron 1 of 4) intron (NM_001199927, intron 1 of 4) 7870 NM_001199927 245050 Mm.71062 NM_177743 ENSMUSG00000038233 Fam198a C730027P07Rik family with sequence similarity 198, member A protein-coding common_peak1_317_3252_-0.0810665142583797_11.6270218499119_1.37640435174672 chr11 49086385 49089262 + 1.37640435174672 NA intron (NM_010999, intron 2 of 5) intron (NM_010999, intron 2 of 5) 806 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak1_238_2022_0.0988239095342944_11.0316925593254_1.37640078012139 chr4 121015400 121017459 + 1.37640078012139 NA intron (NM_133716, intron 1 of 9) intron (NM_133716, intron 1 of 9) 818 NM_133716 69780 Mm.271819 NM_133716 ENSMUSG00000032870 Smap2 1810031K02Rik|AA408614|Smap1l small ArfGAP 2 protein-coding common_peak1_54_300_0.247671341626214_8.35745534757281_1.37621891407532-2 chr5 65335100 65335902 + 1.37621891407532 NA intron (NM_011258, intron 1 of 24) CpG 138 NM_011258 19687 Mm.148877 NM_011258 ENSMUSG00000029191 Rfc1 140kDa|Alp145|RFC140|Recc1 replication factor C (activator 1) 1 protein-coding common_peak1_54_300_0.247671341626214_8.35745534757281_1.37621891407532 chr10 80751798 80752651 + 1.37621891407532 NA Intergenic ZP3AR|Satellite|Satellite -2982 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak1_51_394_-0.243675287237178_8.50387119944588_1.37605401349003-2 chr11 70409412 70410485 + 1.37605401349003 NA promoter-TSS (NM_029231) promoter-TSS (NM_029231) 83 NM_029231 75273 Mm.340601 NM_029231 ENSMUSG00000018921 Pelp1 4930563C04Rik|MNAR proline, glutamic acid and leucine rich protein 1 protein-coding common_peak1_51_394_-0.243675287237178_8.50387119944588_1.37605401349003 chr11 11762809 11763828 + 1.37605401349003 NA intron (NM_001301866, intron 5 of 5) intron (NM_001301866, intron 5 of 5) 45644 NM_021891 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding common_peak1_89_576_0.180363440105506_9.26260922869823_1.37583544774285 chr5 4103838 4105014 + 1.37583544774285 NA 5' UTR (NM_020010, exon 1 of 10) 5' UTR (NM_020010, exon 1 of 10) 271 NM_020010 13121 Mm.140158 NM_020010 ENSMUSG00000001467 Cyp51 AI426508|CYPLI|Cyp51a1|Ldm|P450-14DM|P450LI cytochrome P450, family 51 protein-coding common_peak1_110_940_-0.154132745363841_9.80098454004662_1.37583393545091 chr7 126648981 126650086 + 1.37583393545091 NA intron (NM_029339, intron 1 of 9) CpG 224 NM_029339 75565 Mm.45686 NM_029339 ENSMUSG00000030714 Sgf29 1700023O11Rik|9530025I05Rik|Ccdc101 SAGA complex associated factor 29 protein-coding common_peak1_118_828_0.151844078743894_9.7711503308677_1.37535390293986 chr8 71612003 71613843 + 1.37535390293986 NA exon (NM_146211, exon 3 of 12) exon (NM_146211, exon 3 of 12) 1899 NM_146211 234407 Mm.240885 NM_146211 ENSMUSG00000034807 Colgalt1 2810024B22Rik|Glt25d1 collagen beta(1-O)galactosyltransferase 1 protein-coding common_peak1_137_1212_-0.135156203687359_10.1767857332768_1.37440210536711 chr8 72570431 72572099 + 1.37440210536711 NA promoter-TSS (NM_144534) promoter-TSS (NM_144534) -217 NM_172396 66818 Mm.22565 NM_172396 ENSMUSG00000044600 Smim7 9130011J15Rik small integral membrane protein 7 protein-coding common_peak1_32_150_0.338915208335801_7.40786234349298_1.3740772833079 chr3 116507625 116508397 + 1.3740772833079 NA 5' UTR (NM_025517, exon 1 of 11) 5' UTR (NM_025517, exon 1 of 11) 164 NM_025517 66368 Mm.251228 NM_025517 ENSMUSG00000000339 Rtca 2310009A18Rik|AI450277|RPC|Rtcd1 RNA 3'-terminal phosphate cyclase protein-coding common_peak2_32_150_0.338915208335801_7.40786234349298_1.3740772833079 chr16 96273520 96274473 + 1.3740772833079 NA intron (NM_001122993, intron 2 of 3) intron (NM_001122993, intron 2 of 3) -7036 NM_033149 93961 Mm.154783 NM_033149 ENSMUSG00000074892 B3galt5 1190002B21Rik|AU045265|b3Galt-V UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 protein-coding common_peak1_135_1191_-0.135795325928921_10.1512708574977_1.37341540548309 chr5 34660376 34661316 + 1.37341540548309 NA promoter-TSS (NM_029278) promoter-TSS (NM_029278) 467 NM_019497 14772 Mm.117076 NM_019497 ENSMUSG00000052783 Grk4 A830025H08Rik|GRK|Gprk2l|Gprk4 G protein-coupled receptor kinase 4 protein-coding common_peak1_91_593_0.177366305665457_9.3030022736335_1.37304439530495 chr10 75516435 75517426 + 1.37304439530495 NA intron (NM_175133, intron 1 of 5) intron (NM_175133, intron 1 of 5) 392 NM_175133 68778 Mm.29382 NM_175133 ENSMUSG00000033416 Gucd1 1110038D17Rik guanylyl cyclase domain containing 1 protein-coding common_peak2_435_4320_0.0678173423126154_12.111058186746_1.37302577927511 chr5 137628932 137632996 + 1.37302577927511 NA intron (NR_033148, intron 1 of 21) intron (NR_033148, intron 1 of 21) 1841 NR_033148 100316903 Mm.200763 NR_033148 Gm20605 Lrch4-sap25 predicted gene 20605 ncRNA common_peak1_135_984_0.139393280189502_10.0136765544385_1.37207862371075 chr16 42875712 42876995 + 1.37207862371075 NA promoter-TSS (NR_040522) promoter-TSS (NR_040522) -591 NR_040522 75722 Mm.243747 NR_040521 ENSMUSG00000075070 4932412D23Rik ENSMUSG00000075070|Gm10809 RIKEN cDNA 4932412D23 gene ncRNA common_peak1_171_1330_0.120656936714772_10.4386233242693_1.37175690354658 chr8 82773095 82774638 + 1.37175690354658 NA intron (NM_145600, intron 1 of 9) intron (NM_145600, intron 1 of 9) 260 NM_145600 30932 Mm.269248 NM_145600 ENSMUSG00000031711 Zfp330 BC008086|Noa36|Znf330 zinc finger protein 330 protein-coding common_peak2_44_229_0.280688586620257_7.9858343442545_1.3714001219033-2 chr7 45779492 45780377 + 1.3714001219033 NA Intergenic Intergenic -4013 NM_001005511 381983 Mm.44928 NM_001005511 ENSMUSG00000062044 Lmtk3 BC059845|aatyk3 lemur tyrosine kinase 3 protein-coding common_peak2_44_229_0.280688586620257_7.9858343442545_1.3714001219033 chr13 49271790 49273108 + 1.3714001219033 NA intron (NM_015759, intron 14 of 17) intron (NM_015759, intron 14 of 17) -23743 NM_028340 66329 Mm.34308 NM_025491 ENSMUSG00000021384 Susd3 1700017I11Rik|2810440J20Rik sushi domain containing 3 protein-coding common_peak1_231_1948_0.0999818728137463_10.9785093116648_1.37063179356139 chr15 89308744 89311994 + 1.37063179356139 NA intron (NM_001081030, intron 1 of 39) intron (NM_001081030, intron 1 of 39) -4637 NR_105924 102465981 NR_105924 ENSMUSG00000098442 Mir6959 Gm27807|mmu-mir-6959 microRNA 6959 ncRNA common_peak1_380_3647_0.0734551961625876_11.869617612246_1.37046544117885 chr11 76733429 76736764 + 1.37046544117885 NA intron (NM_016810, intron 7 of 8) intron (NM_016810, intron 7 of 8) 28459 NM_016810 53334 Mm.20931 NM_016810 ENSMUSG00000010392 Gosr1 AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28 golgi SNAP receptor complex member 1 protein-coding common_peak1_258_2240_0.0933928269664879_11.1766233469936_1.37035669418288 chr14 14012056 14013609 + 1.37035669418288 NA intron (NM_139227, intron 1 of 11) CpG 341 NM_139227 246103 Mm.133625 NM_139227 ENSMUSG00000021738 Atxn7 A430107N12Rik|AI627028|Sca7|ataxin-7 ataxin 7 protein-coding common_peak2_40_301_-0.276961474259653_8.09992400219525_1.37020098960472 chr7 44373461 44374791 + 1.37020098960472 NA intron (NM_027049, intron 2 of 5) intron (NM_027049, intron 2 of 5) 904 NM_027049 69349 Mm.358922 NM_027049 ENSMUSG00000008028 1700008O03Rik - RIKEN cDNA 1700008O03 gene protein-coding common_peak2_188_1500_0.114035414484377_10.6087259688629_1.37008673819807 chr19 21651896 21654462 + 1.37008673819807 NA promoter-TSS (NM_146096) promoter-TSS (NM_146096) -130 NM_146096 226016 Mm.28796 NM_146096 ENSMUSG00000047368 Abhd17b 5730446C15Rik|Cgi67|Fam108b|Fam108b1 abhydrolase domain containing 17B protein-coding common_peak1_47_359_-0.251465317051222_8.36612043780406_1.36969622222342 chr17 45433844 45434451 + 1.36969622222342 NA promoter-TSS (NM_152810) promoter-TSS (NM_152810) 316 NR_130961 105246278 Mm.206588 NR_130960 ENSMUSG00000097119 B230354K17Rik - RIKEN cDNA B230354K17 gene ncRNA common_peak2_47_359_-0.251465317051222_8.36612043780406_1.36969622222342 chr19 57103391 57105186 + 1.36969622222342 NA intron (NM_001290813, intron 6 of 20) intron (NM_001290813, intron 6 of 20) 14736 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_62_360_0.225754133064612_8.60873209341948_1.3695602941457 chr13 104228986 104229582 + 1.3695602941457 NA promoter-TSS (NM_172807) promoter-TSS (NM_172807) -104 NM_021790 60411 Mm.281498 NM_021790 ENSMUSG00000021714 Cenpk B130045K24Rik|BB232189|C530004N04Rik|Cenp-K|Solt|Solzt centromere protein K protein-coding common_peak1_213_1758_0.105042963070169_10.833061249007_1.36951552847625 chr1 95312783 95314770 + 1.36951552847625 NA 5' UTR (NM_026321, exon 1 of 3) 5' UTR (NM_026321, exon 1 of 3) 148 NM_026321 67698 Mm.272705 NM_026321 ENSMUSG00000051185 Fam174a 2310044D20Rik|Fam174|Naa6|Tmem157 family with sequence similarity 174, member A protein-coding common_peak1_12_88_-0.546924497511821_6.20227118221049_1.36934044104 chr12 76087326 76087688 + 1.36934044104 NA intron (NM_001005510, intron 99 of 115) intron (NM_001005510, intron 99 of 115) 89752 NM_010157 13983 Mm.2561 NM_010157 ENSMUSG00000021055 Esr2 ER[b]|ERbeta|Estrb estrogen receptor 2 (beta) protein-coding common_peak2_221_2121_-0.100678462363714_11.0008697097329_1.36918432515875 chr13 91806947 91808859 + 1.36918432515875 NA promoter-TSS (NM_145453) promoter-TSS (NM_145453) -207 NM_145453 69085 Mm.52356 NM_145453 ENSMUSG00000021621 Zcchc9 1810019C21Rik zinc finger, CCHC domain containing 9 protein-coding common_peak2_162_1242_0.124233862868886_10.3417275124869_1.36904259182692 chr9 99128733 99132762 + 1.36904259182692 NA intron (NM_029094, intron 1 of 23) MIR|SINE|MIR 9464 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak1_334_3460_-0.0783239391374018_11.7178112565967_1.36865541850907 chr2 11190875 11194426 + 1.36865541850907 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 20268 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak2_84_535_0.185552657394719_9.15886551915513_1.3685655249339 chr16 93786953 93789599 + 1.3685655249339 NA intron (NM_027293, intron 26 of 36) intron (NM_027293, intron 26 of 36) -43845 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak2_67_534_-0.206634197941627_8.9600779823177_1.36805969423457 chr1 93342255 93344336 + 1.36805969423457 NA promoter-TSS (NM_023200) promoter-TSS (NM_023200) -350 NM_023200 66385 Mm.88704 NM_023200 ENSMUSG00000026275 Ppp1r7 2310014J01Rik|SDS22 protein phosphatase 1, regulatory (inhibitor) subunit 7 protein-coding common_peak2_31_229_-0.322624476632851_7.68417781262795_1.3678517603836 chr2 30533856 30535267 + 1.3678517603836 NA Intergenic Intergenic -60362 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak1_31_229_-0.322624476632851_7.68417781262795_1.3678517603836 chr18 12989251 12989777 + 1.3678517603836 NA intron (NM_008378, intron 9 of 10) intron (NM_008378, intron 9 of 10) 17262 NM_008378 16210 Mm.8154 NM_008378 ENSMUSG00000024423 Impact E430016J11Rik impact, RWD domain protein protein-coding common_peak1_31_229_-0.322624476632851_7.68417781262795_1.3678517603836-2 chr6 112948518 112949152 + 1.3678517603836 NA Intergenic Intergenic -1569 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak2_59_463_-0.222712251343513_8.74662486945582_1.36760438739506 chr10 98780665 98782912 + 1.36760438739506 NA Intergenic Intergenic -133364 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak2_140_1242_-0.132344977473181_10.2134380923159_1.36739292421612 chr7 75780880 75783377 + 1.36739292421612 NA Intergenic Intergenic -66210 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_378_4010_-0.0727148909265036_11.9333888053513_1.36733893430572 chr10 17986981 17990232 + 1.36733893430572 NA Intergenic RMER20B|LTR|ERVK 34646 NM_028440 73112 Mm.276041 NM_028440 ENSMUSG00000078453 Abracl 1700028I04Rik|3110003A17Rik ABRA C-terminal like protein-coding common_peak2_391_4175_-0.071192826100134_11.9923095835198_1.36689031836198 chr12 69445546 69449194 + 1.36689031836198 NA Intergenic Intergenic 28180 NR_038060 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak2_40_202_0.296107347880249_7.8133895911253_1.36655170821564 chr14 31227803 31229228 + 1.36655170821564 NA 3' UTR (NM_001025379, exon 16 of 16) 3' UTR (NM_001025379, exon 16 of 16) 10642 NM_001025379 218877 Mm.27812 NM_001025379 ENSMUSG00000021904 Sema3g AK129018 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G protein-coding common_peak1_40_202_0.296107347880249_7.8133895911253_1.36655170821564 chr12 86860456 86860988 + 1.36655170821564 NA Intergenic Intergenic 24092 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_191_1531_0.112411819726207_10.6374064917881_1.36591738033842 chr9 70502473 70504132 + 1.36591738033842 NA intron (NM_033604, intron 1 of 14) CpG 423 NM_033604 93836 Mm.29783 NM_033604 ENSMUSG00000032217 Rnf111 ARK|Arkadia ring finger 111 protein-coding unique_peak2_24_175_-0.373416426500913_7.27272340538684_1.36582771826686 chr11 79056527 79058043 + 1.36582771826686 NA intron (NM_013571, intron 2 of 17) intron (NM_013571, intron 2 of 17) 33688 NR_045873 790910 Mm.440410 NR_045873 Gm11201 ENSMUSG00000072637|OTTMUSG00000000169 predicted gene 11201 ncRNA common_peak1_24_175_-0.373416426500913_7.27272340538684_1.36582771826686 chr11 49082600 49083073 + 1.36582771826686 NA intron (NM_001271677, intron 1 of 2) intron (NM_001271677, intron 1 of 2) -4181 NM_001271676 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak1_24_175_-0.373416426500913_7.27272340538684_1.36582771826686-4 chr6 108922894 108923424 + 1.36582771826686 NA Intergenic Lx7|LINE|L1 94518 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding unique_peak2_24_175_-0.373416426500913_7.27272340538684_1.36582771826686-2 chr8 84703556 84704714 + 1.36582771826686 NA TTS (NM_010906) TTS (NM_010906) 2678 NM_008535 17095 Mm.4925 NM_008535 ENSMUSG00000034041 Lyl1 Lyl-1|bHLHa18 lymphoblastomic leukemia 1 protein-coding common_peak1_24_175_-0.373416426500913_7.27272340538684_1.36582771826686-3 chr2 122234526 122234977 + 1.36582771826686 NA promoter-TSS (NM_146126) promoter-TSS (NM_146126) -88 NM_146126 20322 Mm.371580 NM_146126 ENSMUSG00000027227 Sord Sdh-1|Sdh1|Sodh-1 sorbitol dehydrogenase protein-coding common_peak1_24_175_-0.373416426500913_7.27272340538684_1.36582771826686-2 chr15 93827004 93827268 + 1.36582771826686 NA Intergenic (CATTC)n|Simple_repeat|Simple_repeat 99975 NR_045737 77248 Mm.410768 NR_045737 9430014N10Rik - RIKEN cDNA 9430014N10 gene ncRNA common_peak2_196_1582_0.110661076488119_10.6837760783812_1.36552031852537 chr14 54893135 54895181 + 1.36552031852537 NA promoter-TSS (NM_019402) promoter-TSS (NM_019402) 15 NM_019402 54196 Mm.7723 NM_019402 ENSMUSG00000022194 Pabpn1 PAB2|Pabp3|mPABII poly(A) binding protein, nuclear 1 protein-coding common_peak1_50_385_-0.244786260140623_8.47006390719777_1.3653892768118-2 chr10 42068854 42069613 + 1.3653892768118 NA Intergenic Intergenic -50851 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak1_50_385_-0.244786260140623_8.47006390719777_1.3653892768118 chr10 11149299 11150221 + 1.3653892768118 NA intron (NM_172937, intron 1 of 27) CpG 330 NM_001284354 268281 Mm.133101 NM_172937 ENSMUSG00000090112 Shprh 2610103K11Rik|AA450458|AU024614|BC006883|D230017O13Rik|E130018M05 SNF2 histone linker PHD RING helicase protein-coding common_peak2_107_910_-0.155875054589744_9.75336971650718_1.36515240747365 chr9 57560328 57561856 + 1.36515240747365 NA exon (NM_022813, exon 1 of 9) exon (NM_022813, exon 1 of 9) 148 NM_022813 24044 Mm.286069 NM_022813 ENSMUSG00000040188 Scamp2 AI875466|Sc2 secretory carrier membrane protein 2 protein-coding common_peak2_113_969_-0.150729906337959_9.84647598390551_1.36485128028791 chrX 94724068 94726134 + 1.36485128028791 NA exon (NM_001081473, exon 1 of 1) exon (NM_001081473, exon 1 of 1) 532 NM_001081473 668166 Mm.426145 NM_001081473 ENSMUSG00000073062 Zxdb Zxda zinc finger, X-linked, duplicated B protein-coding common_peak1_36_176_0.312178101128413_7.6236946006472_1.36483396827341 chr6 54971065 54971724 + 1.36483396827341 NA intron (NM_172729, intron 1 of 11) intron (NM_172729, intron 1 of 11) 267 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_36_176_0.312178101128413_7.6236946006472_1.36483396827341 chr11 97839992 97841276 + 1.36483396827341 NA promoter-TSS (NM_001080935) promoter-TSS (NM_001080935) -146 NM_001080935 68127 Mm.110270 NM_001080935 ENSMUSG00000050538 B230217C12Rik AI840637 RIKEN cDNA B230217C12 gene protein-coding common_peak2_219_1821_0.103208396956576_10.8829114422803_1.36435007223241 chr10 96870407 96873810 + 1.36435007223241 NA Intergenic Intergenic -163660 NR_045358 75301 Mm.108650 NR_045358 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA common_peak2_59_338_0.230127280647716_8.5202051034602_1.36434283112989-2 chr11 84512948 84514200 + 1.36434283112989 NA promoter-TSS (NM_019816) promoter-TSS (NM_019816) -73 NM_019816 56321 Mm.257482 NM_019816 ENSMUSG00000018697 Aatf 4933415H02Rik|5830465M17Rik|Che-1|Trb apoptosis antagonizing transcription factor protein-coding common_peak2_59_338_0.230127280647716_8.5202051034602_1.36434283112989 chr11 54941862 54944173 + 1.36434283112989 NA intron (NM_021327, intron 1 of 17) intron (NM_021327, intron 1 of 17) 19923 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak2_25_108_0.387236919864006_6.96180278470893_1.36427376567708 chr5 93149117 93149926 + 1.36427376567708 NA intron (NM_001310669, intron 3 of 10) intron (NM_001310669, intron 3 of 10) 56105 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_25_108_0.387236919864006_6.96180278470893_1.36427376567708-2 chr2 125624607 125625113 + 1.36427376567708 NA intron (NM_001081091, intron 1 of 27) CpG 253 NM_001081091 99100 Mm.330545 NM_001081091 ENSMUSG00000068394 Cep152 AI851464|mKIAA0912 centrosomal protein 152 protein-coding common_peak1_25_108_0.387236919864006_6.96180278470893_1.36427376567708 chr17 33977378 33977876 + 1.36427376567708 NA intron (NR_004446, intron 3 of 5) intron (NR_004446, intron 3 of 5) 1164 NR_004446 630499 Mm.440940 NM_001081015 H2-K2 EG630499|Gm7035|H-2K1|H-2K1K|H-2K2|H2-K1 histocompatibility 2, K region locus 2 pseudo common_peak1_25_108_0.387236919864006_6.96180278470893_1.36427376567708-3 chr5 130079310 130079899 + 1.36427376567708 NA 5' UTR (NM_001130476, exon 1 of 6) 5' UTR (NM_001130476, exon 1 of 6) 234 NM_001130476 22021 Mm.332720 NM_013837 ENSMUSG00000034118 Tpst1 R75054|Tango13a protein-tyrosine sulfotransferase 1 protein-coding common_peak1_121_856_0.147980368120828_9.81714157817292_1.36392051752154 chr11 106536232 106537486 + 1.36392051752154 NA intron (NM_198292, intron 5 of 11) intron (NM_198292, intron 5 of 11) 35868 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA common_peak2_74_597_-0.193851965908438_9.12707569124388_1.36349871053755 chr3 127836719 127838404 + 1.36349871053755 NA promoter-TSS (NM_145964) promoter-TSS (NM_145964) -69 NM_145964 211556 Mm.403486 NM_145964 ENSMUSG00000074238 Ap1ar AA407621|C78909|Gadkin adaptor-related protein complex 1 associated regulatory protein protein-coding common_peak1_64_507_-0.211770166439269_8.88279960355253_1.36335062598705 chr6 30896058 30896962 + 1.36335062598705 NA TTS (NM_054073) TTS (NM_054073) 284 NM_017478 54160 Mm.39896 NM_017478 ENSMUSG00000025607 Copg2 AW227625|gamma-2-COP coatomer protein complex, subunit gamma 2 protein-coding unique_peak2_23_167_-0.378541954686666_7.20304644543543_1.36328554900611 chr19 56775771 56777279 + 1.36328554900611 NA Intergenic Intergenic 37158 NM_170757 213993 Mm.469677 NM_170757 ENSMUSG00000035173 Ccdc186 1810028B20Rik|A630007B06Rik|AI159700|Otg1 coiled-coil domain containing 186 protein-coding common_peak1_363_3444_0.0752813975011062_11.7879289663422_1.36312948709388 chr19 3767269 3768953 + 1.36312948709388 NA 5' UTR (NM_001167884, exon 2 of 14) 5' UTR (NM_001167884, exon 2 of 14) 690 NM_001167885 225888 Mm.278578 NM_144871 ENSMUSG00000045098 Kmt5b AA117471|C630029K18Rik|Suv4-20h1|Suv420h1 lysine methyltransferase 5B protein-coding common_peak1_53_293_0.249147533189587_8.32424611143116_1.36308596424409 chr4 34777758 34778553 + 1.36308596424409 NA intron (NM_025471, intron 1 of 3) intron (NM_025471, intron 1 of 3) 182 NM_025471 66291 Mm.28071 NM_025471 ENSMUSG00000028295 Smim8 1810030N24Rik|2810406B13Rik small integral membrane protein 8 protein-coding common_peak2_43_326_-0.266736771617776_8.2197784396892_1.36133889710533 chr18 14653214 14655277 + 1.36133889710533 NA intron (NM_009280, intron 4 of 10) intron (NM_009280, intron 4 of 10) 28669 NM_001161369 268996 Mm.31761 NM_009280 ENSMUSG00000037013 Ss18 D130059H17|Ssxt|Syt SS18, nBAF chromatin remodeling complex subunit protein-coding common_peak1_163_1252_0.123497188116279_10.35291929338_1.36087537979342 chr10 122799181 122801306 + 1.36087537979342 NA intron (NM_176919, intron 2 of 8) intron (NM_176919, intron 2 of 8) 120928 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA unique_peak1_12_39_0.606880838567214_5.62536851417097_1.36066917175235-2 chr15 76614451 76614822 + 1.36066917175235 NA exon (NM_028064, exon 5 of 12) exon (NM_028064, exon 5 of 12) 2216 NM_028064 72027 Mm.276829 NM_028064 ENSMUSG00000063354 Slc39a4 1600025H15Rik|AU041686|AWMS2|ZIP4 solute carrier family 39 (zinc transporter), member 4 protein-coding unique_peak1_12_39_0.606880838567214_5.62536851417097_1.36066917175235-3 chr6 136521320 136521636 + 1.36066917175235 NA intron (NM_019426, intron 1 of 14) ID4_|SINE|ID 2627 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding unique_peak1_12_39_0.606880838567214_5.62536851417097_1.36066917175235 chr11 79060126 79060467 + 1.36066917175235 NA intron (NM_013571, intron 2 of 17) intron (NM_013571, intron 2 of 17) 36699 NR_045873 790910 Mm.440410 NR_045873 Gm11201 ENSMUSG00000072637|OTTMUSG00000000169 predicted gene 11201 ncRNA common_peak1_470_4761_0.0642582452886007_12.2494810279146_1.36063649079004 chr2 158666141 158670767 + 1.36063649079004 NA intron (NM_001159662, intron 1 of 10) intron (NM_001159662, intron 1 of 10) 1319 NM_001159662 228852 Mm.150540 NM_153089 ENSMUSG00000037754 Ppp1r16b ANKRD4|C130078N17Rik|TIMAP|Wdt4 protein phosphatase 1, regulatory (inhibitor) subunit 16B protein-coding common_peak1_69_414_0.211090499475603_8.80251277597209_1.36003948004688 chr9 21127820 21128944 + 1.36003948004688 NA intron (NM_001205312, intron 2 of 24) intron (NM_001205312, intron 2 of 24) 2893 NM_018793 54721 Mm.20249 NM_018793 ENSMUSG00000032175 Tyk2 JTK1 tyrosine kinase 2 protein-coding common_peak2_64_376_0.218493807064233_8.66766761680078_1.35957941781955 chr2 76672225 76673913 + 1.35957941781955 NA promoter-TSS (NM_010222) promoter-TSS (NM_010222) 29 NM_010222 14231 Mm.24720 NM_010222 ENSMUSG00000002732 Fkbp7 23kDa|FKBP-7|FKBP23 FK506 binding protein 7 protein-coding common_peak2_94_784_-0.168079053503778_9.5325093170271_1.35952558108866 chr14 63193119 63196087 + 1.35952558108866 NA Intergenic Intergenic -1078 NM_201610 382913 Mm.239490 NM_201610 ENSMUSG00000035121 Neil2 Gm1212|NEH2 nei like 2 (E. coli) protein-coding common_peak1_30_221_-0.3277336616158_7.63054903554221_1.35946621505004 chr11 120617409 120618056 + 1.35946621505004 NA TTS (NM_153056) TTS (NM_153056) 158 NM_024229 68671 Mm.21439 NM_024229 ENSMUSG00000025137 Pcyt2 1110033E03Rik|ET phosphate cytidylyltransferase 2, ethanolamine protein-coding unique_peak2_30_221_-0.3277336616158_7.63054903554221_1.35946621505004 chr2 11654480 11656134 + 1.35946621505004 NA intron (NM_008367, intron 1 of 7) intron (NM_008367, intron 1 of 7) 12515 NM_008367 16184 Mm.915 NM_008367 ENSMUSG00000026770 Il2ra CD25|Il2r|Ly-43 interleukin 2 receptor, alpha chain protein-coding common_peak1_30_221_-0.3277336616158_7.63054903554221_1.35946621505004-2 chr2 132816134 132816603 + 1.35946621505004 NA promoter-TSS (NM_175113) promoter-TSS (NM_175113) 227 NM_001291054 66634 Mm.157070 NM_025676 ENSMUSG00000027353 Mcm8 5730432L01Rik minichromosome maintenance 8 homologous recombination repair factor protein-coding common_peak1_24_102_0.399514664953165_6.8862578596598_1.35936224230675-2 chr17 35029620 35030151 + 1.35936224230675 NA exon (NM_013600, exon 21 of 24) exon (NM_013600, exon 21 of 24) -1869 NM_023893 78376 Mm.390966 NM_023893 ENSMUSG00000036185 Sapcd1 2810436B06Rik|G7d|Ng23 suppressor APC domain containing 1 protein-coding common_peak2_24_102_0.399514664953165_6.8862578596598_1.35936224230675 chr11 46372601 46373337 + 1.35936224230675 NA intron (NM_001281965, intron 1 of 16) Lx8b|LINE|L1 16546 NM_001281968 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding common_peak1_24_102_0.399514664953165_6.8862578596598_1.35936224230675-5 chr5 125053207 125053742 + 1.35936224230675 NA intron (NM_001253904, intron 18 of 47) intron (NM_001253904, intron 18 of 47) 49999 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_24_102_0.399514664953165_6.8862578596598_1.35936224230675-4 chr4 144907180 144907735 + 1.35936224230675 NA intron (NM_011303, intron 1 of 5) intron (NM_011303, intron 1 of 5) 14320 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_24_102_0.399514664953165_6.8862578596598_1.35936224230675-3 chr17 78199659 78200105 + 1.35936224230675 NA promoter-TSS (NM_015800) promoter-TSS (NM_015800) -366 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding unique_peak2_24_102_0.399514664953165_6.8862578596598_1.35936224230675-2 chr5 146792237 146793169 + 1.35936224230675 NA intron (NM_011669, intron 1 of 8) intron (NM_011669, intron 1 of 8) 2253 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak1_24_102_0.399514664953165_6.8862578596598_1.35936224230675 chr13 37994337 37994727 + 1.35936224230675 NA promoter-TSS (NM_025965) promoter-TSS (NM_025965) -342 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding unique_peak2_24_102_0.399514664953165_6.8862578596598_1.35936224230675 chr14 25614996 25615643 + 1.35936224230675 NA intron (NM_001310666, intron 6 of 23) intron (NM_001310666, intron 6 of 23) 11806 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak2_24_102_0.399514664953165_6.8862578596598_1.35936224230675-2 chr7 58740984 58741642 + 1.35936224230675 NA intron (NM_009728, intron 2 of 20) intron (NM_009728, intron 2 of 20) 83111 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_145_1079_0.132115740521154_10.1428734673114_1.35931902265515 chr10 95939914 95941866 + 1.35931902265515 NA 5' UTR (NM_001001932, exon 1 of 29) 5' UTR (NM_001001932, exon 1 of 29) 227 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak2_141_1252_-0.131398842288487_10.2254712781776_1.35848566955139 chr8 109607809 109609717 + 1.35848566955139 NA promoter-TSS (NM_020046) promoter-TSS (NM_020046) -90 NM_020046 56749 Mm.23894 NM_020046 ENSMUSG00000031730 Dhodh 2810417D19Rik|AI834883 dihydroorotate dehydrogenase protein-coding common_peak1_39_293_-0.281925806019231_8.05870944182675_1.35833562555517 chr13 67754758 67755397 + 1.35833562555517 NA promoter-TSS (NM_001001130) promoter-TSS (NM_001001130) 57 NM_001001130 22746 Mm.288396 NM_001001130 ENSMUSG00000058331 Zfp85 KRAB19|Rslcan2|Zfp71|Zfp85-rs1 zinc finger protein 85 protein-coding common_peak2_92_602_0.174802528987506_9.32341545639384_1.35798525333577 chr10 80750768 80753066 + 1.35798525333577 NA Intergenic Intergenic -3289 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak2_71_569_-0.196908124806725_9.05636404664874_1.35782995260003-2 chr6 39573284 39574689 + 1.35782995260003 NA 5' UTR (NM_178873, exon 1 of 8) 5' UTR (NM_178873, exon 1 of 8) 110 NM_178873 57869 Mm.247957 NM_178873 ENSMUSG00000046947 Adck2 AA408112|BB006057 aarF domain containing kinase 2 protein-coding common_peak2_71_569_-0.196908124806725_9.05636404664874_1.35782995260003 chr19 38053680 38055698 + 1.35782995260003 NA promoter-TSS (NM_028760) promoter-TSS (NM_028760) -336 NM_028293 74107 Mm.9916 NM_028293 ENSMUSG00000024989 Cep55 1200008O12Rik|2700032M20Rik centrosomal protein 55 protein-coding common_peak1_85_698_-0.176809163935131_9.36074406340787_1.35771659555275 chr10 80602573 80603825 + 1.35771659555275 NA intron (NM_019575, intron 1 of 6) intron (NM_019575, intron 1 of 6) 317 NM_019575 56214 Mm.273170 NM_019575 ENSMUSG00000078441 Scamp4 2410022D05Rik|AI448940|AU022392|AW742369|Sc4 secretory carrier membrane protein 4 protein-coding common_peak1_124_1078_-0.141358370473313_10.0047999642514_1.3576104355818 chr16 3883966 3885331 + 1.3576104355818 NA promoter-TSS (NM_029090) promoter-TSS (NM_029090) 29 NM_001290689 74763 Mm.28403 NM_029090 ENSMUSG00000005982 Naa60 1200013P24Rik|AI315146|Nat15 N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding common_peak1_337_3496_-0.07747592098195_11.7331641202067_1.35736504585393 chr13 48965997 48969082 + 1.35736504585393 NA promoter-TSS (NR_015601) promoter-TSS (NR_015601) 289 NM_001033268 218236 Mm.426571 NM_001033268 ENSMUSG00000038014 Fam120a C9orf10|Ossa family with sequence similarity 120, member A protein-coding unique_peak2_13_95_-0.525010061889586_6.32245746977636_1.35721122071863-2 chr4 135433922 135434618 + 1.35721122071863 NA promoter-TSS (NM_022980) promoter-TSS (NM_022980) -465 NM_022980 53902 Mm.331970 NM_022980 ENSMUSG00000059713 Rcan3 AU041093|Csp3|Dscr1l2 regulator of calcineurin 3 protein-coding common_peak1_13_95_-0.525010061889586_6.32245746977636_1.35721122071863 chr16 92784076 92784468 + 1.35721122071863 NA intron (NM_001111022, intron 2 of 6) B4|SINE|B4 41802 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding unique_peak2_13_95_-0.525010061889586_6.32245746977636_1.35721122071863-3 chrX 73214291 73215005 + 1.35721122071863 NA intron (NM_021365, intron 1 of 8) intron (NM_021365, intron 1 of 8) 315 NM_001293679 27083 Mm.104764 NM_021365 ENSMUSG00000067768 Xlr4b Xlr4 X-linked lymphocyte-regulated 4B protein-coding unique_peak2_13_95_-0.525010061889586_6.32245746977636_1.35721122071863 chr3 69223612 69224371 + 1.35721122071863 NA TTS (NM_027843) TTS (NM_027843) 1572 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding common_peak1_152_1146_0.128155617264916_10.2277274846483_1.35672205126589 chr7 100227137 100228469 + 1.35672205126589 NA 5' UTR (NM_027629, exon 1 of 14) 5' UTR (NM_027629, exon 1 of 14) 196 NM_027629 70974 Mm.440524 NM_027629 ENSMUSG00000030729 Pgm2l1 4931406N15Rik|AI553438|BM32A phosphoglucomutase 2-like 1 protein-coding common_peak1_83_527_0.186305146812757_9.13754669276483_1.35595259311222 chr1 86153863 86154783 + 1.35595259311222 NA promoter-TSS (NM_027456) promoter-TSS (NM_027456) -457 NM_030184 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding common_peak1_23_96_0.413862625904967_6.80684415513961_1.3558234454049-3 chr7 80575400 80576071 + 1.3558234454049 NA Intergenic Intergenic -40616 NM_001042527 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding unique_peak2_23_96_0.413862625904967_6.80684415513961_1.3558234454049 chr14 54640898 54641846 + 1.3558234454049 NA promoter-TSS (NM_199470) promoter-TSS (NM_199470) -8 NM_199470 239096 Mm.386871 NM_199470 ENSMUSG00000059674 Cdh24 1700040A22Rik|ENSMUSG00000022188 cadherin-like 24 protein-coding common_peak1_23_96_0.413862625904967_6.80684415513961_1.3558234454049-2 chr12 16810979 16811494 + 1.3558234454049 NA exon (NM_033270, exon 1 of 7) exon (NM_033270, exon 1 of 7) 271 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding common_peak2_23_96_0.413862625904967_6.80684415513961_1.3558234454049 chr2 31823103 31823808 + 1.3558234454049 NA intron (NM_178887, intron 4 of 6) intron (NM_178887, intron 4 of 6) -12875 NM_183424 227717 Mm.185027 NM_183424 ENSMUSG00000043102 Qrfp P518 pyroglutamylated RFamide peptide protein-coding common_peak1_23_96_0.413862625904967_6.80684415513961_1.3558234454049 chr11 117995397 117995825 + 1.3558234454049 NA intron (NM_133757, intron 1 of 9) intron (NM_133757, intron 1 of 9) -6659 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA common_peak2_120_1038_-0.144413094268764_9.94877339176983_1.35580054607124 chr6 122872437 122875189 + 1.35580054607124 NA promoter-TSS (NM_026267) promoter-TSS (NM_026267) -744 NM_026267 67602 Mm.288114 NM_026267 ENSMUSG00000030327 Necap1 1200016B17Rik|AI747569|mFLJ00061 NECAP endocytosis associated 1 protein-coding common_peak1_141_1041_0.134632294754866_10.0924557096559_1.35575266617294 chr9 13296644 13299512 + 1.35575266617294 NA Intergenic Intergenic 51099 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding common_peak1_78_633_-0.186239939026091_9.21521906062636_1.35573293144326 chr1 75192127 75192965 + 1.35573293144326 NA promoter-TSS (NR_109938) promoter-TSS (NR_109938) 386 NR_051999 52231 Mm.259326 NM_026187 ENSMUSG00000026199 Ankzf1 1300008P06Rik|2810025E10Rik|D1Ertd161e ankyrin repeat and zinc finger domain containing 1 protein-coding common_peak1_52_401_-0.235309925735816_8.53339672831102_1.35572571843482-2 chr6 8640381 8641607 + 1.35572571843482 NA intron (NM_001252266, intron 11 of 11) MIR|SINE|MIR 117464 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak1_52_401_-0.235309925735816_8.53339672831102_1.35572571843482 chr17 45554684 45555532 + 1.35572571843482 NA promoter-TSS (NM_001304956) promoter-TSS (NM_001304956) -592 NM_008690 18037 Mm.57043 NM_008690 ENSMUSG00000023947 Nfkbie I-kappa-B-epsilon|IKBE|IkB-E|NF-kappa-BIE|ikB-epsilon nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon protein-coding common_peak2_213_2030_-0.102391793754023_10.9367786274191_1.35564646288138 chr2 165981146 165984029 + 1.35564646288138 NA Intergenic Intergenic -10050 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak2_106_899_-0.154810771861264_9.73637580528641_1.35495442526768 chr13 17625499 17628883 + 1.35495442526768 NA intron (NM_138654, intron 6 of 13) RLTR50A|LTR|ERVK 67574 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak2_218_1811_0.103086302492679_10.8749103912926_1.35462609518512 chr9 65578013 65581235 + 1.35462609518512 NA intron (NM_153119, intron 1 of 5) intron (NM_153119, intron 1 of 5) 463 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_22_160_-0.392456074021107_7.13468884110406_1.35448344719036 chr13 95913211 95913744 + 1.35448344719036 NA Intergenic MTD|LTR|ERVL-MaLR -21555 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding unique_peak2_22_160_-0.392456074021107_7.13468884110406_1.35448344719036 chr13 52596222 52597683 + 1.35448344719036 NA promoter-TSS (NM_011518) promoter-TSS (NM_011518) 70 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding unique_peak2_21_152_-0.397590099998701_7.0585927926933_1.35429615182351 chr16 49865932 49867457 + 1.35429615182351 NA intron (NM_010581, intron 1 of 9) intron (NM_010581, intron 1 of 9) 11040 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_108_919_-0.153747815414739_9.76861614323701_1.35417184953158 chr3 68789787 68791552 + 1.35417184953158 NA Intergenic ORR1A4|LTR|ERVL-MaLR -78917 NM_001167996 68725 Mm.45741 NM_001167996 ENSMUSG00000046999 1110032F04Rik AI115547 RIKEN cDNA 1110032F04 gene protein-coding common_peak1_178_1401_0.116273951412145_10.5114076097167_1.35405062183862 chr6 136964316 136966124 + 1.35405062183862 NA Intergenic Intergenic 10697 NM_023898 78600 Mm.290622 NM_023898 ENSMUSG00000064330 Pde6h A930033D18Rik|PDEgamma phosphodiesterase 6H, cGMP-specific, cone, gamma protein-coding common_peak1_176_1622_-0.114786363352863_10.6070541028715_1.35392059549086 chr14 53958022 53960341 + 1.35392059549086 NA Intergenic Intergenic 294748 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_148_1107_0.131182836058432_10.1793335840784_1.35306275311175 chr5 121329123 121331256 + 1.35306275311175 NA intron (NM_181421, intron 49 of 75) IAPLTR2a|LTR|ERVK 55426 NM_001163470 231712 Mm.20488 NM_172275 ENSMUSG00000042726 Trafd1 1110008K06Rik|Fln29 TRAF type zinc finger domain containing 1 protein-coding common_peak2_133_1169_-0.135136803134687_10.1247244129034_1.35273708370037 chr8 88361014 88363112 + 1.35273708370037 NA 5' UTR (NM_012047, exon 1 of 17) 5' UTR (NM_012047, exon 1 of 17) 128 NM_012047 26992 Mm.5400 NM_012047 ENSMUSG00000031660 Brd7 BP75|CELTIX1|Ptpn13ip bromodomain containing 7 protein-coding common_peak2_42_317_-0.267155785030404_8.17930506276915_1.35234737431756 chr16 91365838 91367696 + 1.35234737431756 NA Intergenic Intergenic -6016 NM_010509 15976 Mm.6834 NM_010509 ENSMUSG00000022971 Ifnar2 AI747302|Ifnar-2 interferon (alpha and beta) receptor 2 protein-coding common_peak1_42_317_-0.267155785030404_8.17930506276915_1.35234737431756 chr10 44267775 44268318 + 1.35234737431756 NA promoter-TSS (NM_001314013) promoter-TSS (NM_001314013) -293 NM_001314013 11793 Mm.22264 NM_053069 ENSMUSG00000038160 Atg5 2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy autophagy related 5 protein-coding common_peak1_30_138_0.347741132010799_7.29281163872891_1.3522362555043 chr10 26801055 26801688 + 1.3522362555043 NA intron (NM_176837, intron 1 of 14) intron (NM_176837, intron 1 of 14) 28859 NM_176837 73910 Mm.356496 NM_176837 ENSMUSG00000039031 Arhgap18 4833419J07Rik|AI314906|AI843501 Rho GTPase activating protein 18 protein-coding common_peak2_30_138_0.347741132010799_7.29281163872891_1.3522362555043 chr1 193329318 193330229 + 1.3522362555043 NA intron (NM_001277928, intron 10 of 22) intron (NM_001277928, intron 10 of 22) 27530 NM_001277928 16780 Mm.435441 NM_008484 ENSMUSG00000026639 Lamb3 - laminin, beta 3 protein-coding common_peak2_30_138_0.347741132010799_7.29281163872891_1.3522362555043-2 chr7 120684238 120685394 + 1.3522362555043 NA intron (NM_001164580, intron 1 of 2) intron (NM_001164580, intron 1 of 2) 7196 NM_001164580 233812 Mm.276479 NM_001164580 ENSMUSG00000046096 BC030336 - cDNA sequence BC030336 protein-coding common_peak1_240_2337_-0.0952077192770062_11.1434553548932_1.35212172939891 chr13 24638320 24641230 + 1.35212172939891 NA intron (NM_001080381, intron 1 of 14) intron (NM_001080381, intron 1 of 14) 1127 NM_029679 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_29_213_-0.332810553803443_7.57506170949942_1.35156007174395 chr14 70792308 70792865 + 1.35156007174395 NA Intergenic Intergenic 18205 NM_010071 13449 Mm.243323 NM_010071 ENSMUSG00000022102 Dok2 DokR|Frip docking protein 2 protein-coding unique_peak2_29_213_-0.332810553803443_7.57506170949942_1.35156007174395-2 chr2 91875840 91877259 + 1.35156007174395 NA intron (NM_001080754, intron 13 of 18) intron (NM_001080754, intron 13 of 18) -45640 NM_007699 12672 Mm.330405 NM_007699 ENSMUSG00000040495 Chrm4 Chrm-4|M4 cholinergic receptor, muscarinic 4 protein-coding unique_peak2_29_213_-0.332810553803443_7.57506170949942_1.35156007174395 chr15 81104397 81105607 + 1.35156007174395 NA promoter-TSS (NM_153049) promoter-TSS (NM_153049) 45 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak2_80_652_-0.184597098553553_9.25864063226966_1.35099932308414 chr16 49818141 49819539 + 1.35099932308414 NA Intergenic MTD|LTR|ERVL-MaLR -36814 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_112_775_0.155606655985274_9.67771617017976_1.35098093103482 chr10 78243309 78245449 + 1.35098093103482 NA intron (NM_001081055, intron 1 of 22) CpG 263 NM_001081055 216131 Mm.27539 NM_001081055 ENSMUSG00000000374 Trappc10 B230307C21Rik|Gm870|Tmem1 trafficking protein particle complex 10 protein-coding common_peak1_38_284_-0.281874659444244_8.01388077932998_1.35067140890787 chr7 75788733 75789589 + 1.35067140890787 NA Intergenic RCHARR1|DNA|hAT-Charlie -59177 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_38_284_-0.281874659444244_8.01388077932998_1.35067140890787-2 chr8 94098447 94099168 + 1.35067140890787 NA promoter-TSS (NM_026116) promoter-TSS (NM_026116) 4 NM_026116 67378 Mm.292107 NM_026116 ENSMUSG00000031755 Bbs2 2410125H22Rik|AI447581 Bardet-Biedl syndrome 2 (human) protein-coding common_peak2_345_3595_-0.0763544628355408_11.7740000740967_1.35049936099617 chr11 51262078 51265434 + 1.35049936099617 NA promoter-TSS (NM_177567) promoter-TSS (NM_177567) 642 NM_007714 12750 Mm.239354 NM_007714 ENSMUSG00000020385 Clk4 AI987988|C85119 CDC like kinase 4 protein-coding unique_peak2_19_137_-0.417390229147393_6.89982934220447_1.35048278929447 chr17 27587928 27588992 + 1.35048278929447 NA intron (NM_001291046, intron 2 of 4) intron (NM_001291046, intron 2 of 4) -22733 NM_001002895 106672 Mm.61488 NM_001002895 ENSMUSG00000062753 AI413582 AI854251 expressed sequence AI413582 protein-coding common_peak1_46_244_0.266493148423447_8.06988451321429_1.35046556310576 chr7 139968676 139969450 + 1.35046556310576 NA Intergenic Intergenic 9692 NM_001033465 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding common_peak2_135_985_0.137929358155329_10.0144085154556_1.35045889466791 chr16 46119179 46121227 + 1.35045889466791 NA promoter-TSS (NM_032465) promoter-TSS (NM_032465) 45 NM_032465 84544 Mm.29204 NM_032465 ENSMUSG00000022657 Cd96 1700109I12Rik|Tactile CD96 antigen protein-coding common_peak2_167_1525_-0.118227669476964_10.516425412096_1.35045594144679 chr15 31600819 31602917 + 1.35045594144679 NA promoter-TSS (NM_007637) promoter-TSS (NM_007637) -64 NM_007637 12465 Mm.282158 NM_007637 ENSMUSG00000022234 Cct5 CCT-epsilon|Ccte|TCP-1-epsilon|TCPE|mKIAA0098 chaperonin containing Tcp1, subunit 5 (epsilon) protein-coding common_peak2_108_740_0.158412503223802_9.61253598391773_1.35044473571995 chr6 47747904 47749811 + 1.35044473571995 NA Intergenic CpG 4068 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_146_1089_0.13089833339968_10.1555615863641_1.35004140962531 chr15 5241125 5243399 + 1.35004140962531 NA exon (NM_008965, exon 2 of 3) exon (NM_008965, exon 2 of 3) 1925 NM_001136079 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak1_52_286_0.250834838767425_8.2903243460594_1.35001788746888 chr15 97816789 97817804 + 1.35001788746888 NA intron (NM_001204275, intron 1 of 24) intron (NM_001204275, intron 1 of 24) -2433 NM_001204281 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak1_91_755_-0.170556997754849_9.47696392534365_1.34992414577141-2 chr17 24707310 24708666 + 1.34992414577141 NA promoter-TSS (NM_145396) promoter-TSS (NM_145396) -335 NM_145396 213773 Mm.100353 NM_145396 ENSMUSG00000040688 Tbl3 9430070M15Rik transducin (beta)-like 3 protein-coding common_peak1_91_755_-0.170556997754849_9.47696392534365_1.34992414577141 chr11 21370151 21371276 + 1.34992414577141 NA promoter-TSS (NM_139297) promoter-TSS (NM_139297) -84 NM_139297 216558 Mm.28877 NM_139297 ENSMUSG00000001891 Ugp2 UDPGP|UGPase UDP-glucose pyrophosphorylase 2 protein-coding common_peak1_14_102_-0.504456405771871_6.43427232429728_1.34940702526795 chr1 135129209 135129621 + 1.34940702526795 NA 5' UTR (NM_007955, exon 2 of 38) 5' UTR (NM_007955, exon 2 of 38) 3160 NM_007955 13924 Mm.4450 NM_007955 Ptprv Esp|OST|OST-PTP|mOST-PTP protein tyrosine phosphatase, receptor type, V protein-coding unique_peak2_14_102_-0.504456405771871_6.43427232429728_1.34940702526795 chr13 112437583 112438160 + 1.34940702526795 NA Intergenic RCHARR1|DNA|hAT-Charlie -26199 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak1_14_102_-0.504456405771871_6.43427232429728_1.34940702526795-2 chr4 133841843 133842252 + 1.34940702526795 NA Intergenic Intergenic 32684 NM_001285506 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak1_186_1481_0.11358794179619_10.5901237032039_1.34929946239819 chr4 31963276 31964662 + 1.34929946239819 NA promoter-TSS (NM_172688) promoter-TSS (NM_172688) -138 NM_009316 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_222_2131_-0.0995078488047731_11.0082377983568_1.34882106738655 chr4 145209554 145213064 + 1.34882106738655 NA Intergenic MTEb|LTR|ERVL-MaLR -16304 NM_001276465 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding common_peak1_49_265_0.257345067821552_8.18395496941196_1.34873079156363 chr13 55593157 55593928 + 1.34873079156363 NA exon (NM_026211, exon 2 of 5) exon (NM_026211, exon 2 of 5) 407 NM_026211 67511 Mm.45233 NM_026211 ENSMUSG00000058569 Tmed9 2400003B06Rik transmembrane p24 trafficking protein 9 protein-coding common_peak1_49_265_0.257345067821552_8.18395496941196_1.34873079156363-2 chr2 128686759 128687546 + 1.34873079156363 NA intron (NM_008569, intron 1 of 47) CpG 243 NM_008569 17222 Mm.277408 NM_008569 ENSMUSG00000014355 Anapc1 2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24 anaphase promoting complex subunit 1 protein-coding common_peak2_49_265_0.257345067821552_8.18395496941196_1.34873079156363 chr1 172548985 172551109 + 1.34873079156363 NA intron (NR_040558, intron 1 of 2) intron (NR_040558, intron 1 of 2) 759 NR_040558 71319 Mm.123774 NR_040558 ENSMUSG00000085184 4933439K11Rik - RIKEN cDNA 4933439K11 gene ncRNA common_peak2_60_471_-0.218123598314868_8.77358125020441_1.34810970100882 chr8 77450890 77453053 + 1.34810970100882 NA intron (NM_030113, intron 1 of 22) L1M5|LINE|L1 -65085 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_20_145_-0.41234991508152_6.98364960133926_1.34748857079678-5 chr7 125554615 125555072 + 1.34748857079678 NA intron (NM_001008700, intron 1 of 10) intron (NM_001008700, intron 1 of 10) 2561 NM_001008700 16190 Mm.233802 NM_010557 ENSMUSG00000030748 Il4ra CD124|Il4r interleukin 4 receptor, alpha protein-coding common_peak1_20_145_-0.41234991508152_6.98364960133926_1.34748857079678 chr10 84916754 84917180 + 1.34748857079678 NA promoter-TSS (NM_001013441) promoter-TSS (NM_001013441) -646 NM_001013441 237422 Mm.18936 NM_183172 ENSMUSG00000035620 Ric8b BC051080|Ric-8|Ric-8b RIC8 guanine nucleotide exchange factor B protein-coding common_peak1_20_145_-0.41234991508152_6.98364960133926_1.34748857079678-6 chr9 97307525 97307951 + 1.34748857079678 NA Intergenic Intergenic 62220 NM_030219 78911 Mm.108347 NM_030219 ENSMUSG00000032451 Trim42 4930486B16Rik tripartite motif-containing 42 protein-coding common_peak1_20_145_-0.41234991508152_6.98364960133926_1.34748857079678-3 chr14 57885298 57885811 + 1.34748857079678 NA intron (NM_029492, intron 1 of 12) MTC|LTR|ERVL-MaLR 4708 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|ENSMUSG00000055956|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak1_20_145_-0.41234991508152_6.98364960133926_1.34748857079678-2 chr10 117804391 117804814 + 1.34748857079678 NA Intergenic Intergenic -11897 NM_134010 103468 Mm.12568 NM_134010 ENSMUSG00000052798 Nup107 AW541137|C76801 nucleoporin 107 protein-coding common_peak1_20_145_-0.41234991508152_6.98364960133926_1.34748857079678-4 chr2 71873300 71873635 + 1.34748857079678 NA exon (NM_172665, exon 1 of 11) exon (NM_172665, exon 1 of 11) 243 NM_172665 228026 Mm.34411 NM_172665 ENSMUSG00000006494 Pdk1 B830012B01|D530020C15Rik pyruvate dehydrogenase kinase, isoenzyme 1 protein-coding common_peak2_131_948_0.140280293012481_9.96040442352735_1.34733013840274 chr2 112238730 112241223 + 1.34733013840274 NA exon (NM_207206, exon 1 of 14) exon (NM_207206, exon 1 of 14) 135 NM_207206 99010 Mm.33438 NM_207206 ENSMUSG00000027134 Lpcat4 AI505034|Agpat7|Aytl3|LPEAT2 lysophosphatidylcholine acyltransferase 4 protein-coding common_peak1_57_444_-0.222385900154835_8.68646857577634_1.34672332806257 chr5 142926431 142927211 + 1.34672332806257 NA Intergenic Intergenic -20067 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding unique_peak2_18_130_-0.43305879814056_6.81689360246717_1.34646345226332 chr19 11395074 11396013 + 1.34646345226332 NA Intergenic Intergenic -12118 NM_029499 64380 Mm.440715 NM_029499 ENSMUSG00000024675 Ms4a4c 5830413L19Rik|AI449185|Ms4a9 membrane-spanning 4-domains, subfamily A, member 4C protein-coding unique_peak2_18_130_-0.43305879814056_6.81689360246717_1.34646345226332-3 chrX 159210966 159211813 + 1.34646345226332 NA Intergenic Intergenic -44393 NM_148945 110651 Mm.328476 NM_148945 ENSMUSG00000031309 Rps6ka3 MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2 ribosomal protein S6 kinase polypeptide 3 protein-coding common_peak1_18_130_-0.43305879814056_6.81689360246717_1.34646345226332-2 chr16 32434378 32434976 + 1.34646345226332 NA intron (NM_001163160, intron 1 of 8) B1_Mur4|SINE|Alu 3447 NM_001163160 13026 Mm.98775 NM_009981 ENSMUSG00000005615 Pcyt1a CTalpha|Cctalpha|Ctpct|Cttalpha phosphate cytidylyltransferase 1, choline, alpha isoform protein-coding common_peak1_18_130_-0.43305879814056_6.81689360246717_1.34646345226332 chr11 109312256 109312702 + 1.34646345226332 NA Intergenic Intergenic -14298 NM_011268 19739 Mm.38548 NM_011268 ENSMUSG00000020599 Rgs9 RGS9-1|Rgs9-2 regulator of G-protein signaling 9 protein-coding common_peak1_18_130_-0.43305879814056_6.81689360246717_1.34646345226332-3 chr6 86645315 86645717 + 1.34646345226332 NA Intergenic Intergenic 17342 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding unique_peak2_18_130_-0.43305879814056_6.81689360246717_1.34646345226332-2 chr5 124024703 124025716 + 1.34646345226332 NA intron (NM_177876, intron 1 of 3) ID4_|SINE|ID 7051 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak2_123_1068_-0.142139310613471_9.99097648241375_1.34624292768148 chr10 128498315 128500510 + 1.34624292768148 NA promoter-TSS (NM_172259) promoter-TSS (NM_172259) 165 NR_131151 654440 Mm.441262 NR_131150 ENSMUSG00000097353 A430046D13Rik - Riken cDNA A430046D13 gene ncRNA common_peak2_80_503_0.189062159492963_9.0718110032464_1.34604830402895 chr4 43030498 43032085 + 1.34604830402895 NA promoter-TSS (NM_023231) promoter-TSS (NM_023231) 93 NM_023231 66592 Mm.331565 NM_023231 ENSMUSG00000028455 Stoml2 0610038F01Rik|MSLP2|SLP-2 stomatin (Epb7.2)-like 2 protein-coding common_peak2_207_1962_-0.103586279266171_10.8870513178331_1.34572416481568 chr12 108178024 108180755 + 1.34572416481568 NA promoter-TSS (NM_009832) promoter-TSS (NM_009832) -105 NM_028262 52690 Mm.159185 NM_028262 ENSMUSG00000056770 Setd3 2610102I01Rik|2610305M23Rik|6030490B17Rik|D12Ertd771e SET domain containing 3 protein-coding common_peak1_68_407_0.210169978275299_8.77751033110914_1.34572290441167-2 chr15 78614159 78615722 + 1.34572290441167 NA intron (NM_028195, intron 8 of 12) intron (NM_028195, intron 8 of 12) 17893 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak1_68_407_0.210169978275299_8.77751033110914_1.34572290441167-3 chr17 24072737 24073554 + 1.34572290441167 NA TTS (NM_001080773) TTS (NM_001080773) 340 NM_027008 69259 Mm.28171 NM_027008 ENSMUSG00000016946 Kctd5 2610030N08Rik|mKIAA0176 potassium channel tetramerisation domain containing 5 protein-coding common_peak1_68_407_0.210169978275299_8.77751033110914_1.34572290441167 chr11 51619166 51620382 + 1.34572290441167 NA promoter-TSS (NM_026631) promoter-TSS (NM_026631) 1 NM_026631 52530 Mm.28203 NM_026631 ENSMUSG00000001056 Nhp2 2410130M07Rik|D11Ertd175e|Nola2 NHP2 ribonucleoprotein protein-coding common_peak2_65_515_-0.207294996576017_8.90757975713525_1.34565232022709-2 chr4 62618055 62620730 + 1.34565232022709 NA promoter-TSS (NM_134257) promoter-TSS (NM_134257) -280 NM_001081650 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_65_515_-0.207294996576017_8.90757975713525_1.34565232022709 chr13 98944216 98945545 + 1.34565232022709 NA Intergenic Intergenic -18496 NM_178716 238799 Mm.173286 NM_178716 ENSMUSG00000009470 Tnpo1 AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN transportin 1 protein-coding common_peak2_151_1137_0.127916294649376_10.2162429896313_1.3455307239094 chr11 82763307 82765100 + 1.3455307239094 NA promoter-TSS (NM_025884) promoter-TSS (NM_025884) 118 NM_009839 12467 Mm.4126 NM_009839 ENSMUSG00000020698 Cct6b CCT-zeta-2|CCTzeta-2|Cctz-2|TCP-1-zeta-2 chaperonin containing Tcp1, subunit 6b (zeta) protein-coding common_peak1_199_1614_0.108533676114165_10.7115852876384_1.34520429236933 chr1 43518890 43521199 + 1.34520429236933 NA intron (NM_010879, intron 2 of 4) intron (NM_010879, intron 2 of 4) 74293 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_42_216_0.284175937809471_7.90363920134921_1.34508091632953 chr1 36768054 36768895 + 1.34508091632953 NA intron (NM_001289765, intron 1 of 12) intron (NM_001289765, intron 1 of 12) 1540 NM_001289765 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak2_15_109_-0.485106450399492_6.53880648832491_1.34502200639345 chr19 10816123 10816587 + 1.34502200639345 NA intron (NM_009852, intron 1 of 12) L1_Rod|LINE|L1 13703 NM_001037801 12511 Mm.290897 NM_009852 ENSMUSG00000024670 Cd6 - CD6 antigen protein-coding unique_peak2_15_109_-0.485106450399492_6.53880648832491_1.34502200639345-2 chr11 53779791 53780717 + 1.34502200639345 NA Intergenic Intergenic 9781 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak1_15_109_-0.485106450399492_6.53880648832491_1.34502200639345 chr11 116416608 116417073 + 1.34502200639345 NA Intergenic Intergenic -3808 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding unique_peak2_15_109_-0.485106450399492_6.53880648832491_1.34502200639345 chr1 173408686 173409763 + 1.34502200639345 NA Intergenic Intergenic -11380 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding unique_peak2_15_109_-0.485106450399492_6.53880648832491_1.34502200639345-3 chr13 85476123 85476972 + 1.34502200639345 NA Intergenic Intergenic -187061 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding unique_peak2_15_109_-0.485106450399492_6.53880648832491_1.34502200639345-4 chr7 128184261 128184906 + 1.34502200639345 NA intron (NM_001029872, intron 8 of 30) intron (NM_001029872, intron 8 of 30) 10637 NM_001029872 381924 Mm.334257 NM_001029872 ENSMUSG00000070369 Itgad Cd11d integrin, alpha D protein-coding common_peak1_15_109_-0.485106450399492_6.53880648832491_1.34502200639345-2 chr4 152451636 152452044 + 1.34502200639345 NA intron (NM_010598, intron 1 of 15) L1MB2|LINE|L1 -2985 NM_001252656 16498 Mm.388924 NM_010598 ENSMUSG00000028931 Kcnab2 F5|I2rf5|Kcnb3|kv-beta-2 potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein-coding common_peak1_28_205_-0.33783721267065_7.51758192084789_1.34419216242945-2 chr14 121280823 121281375 + 1.34419216242945 NA intron (NM_134082, intron 26 of 26) intron (NM_134082, intron 26 of 26) 98131 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_28_205_-0.33783721267065_7.51758192084789_1.34419216242945 chr1 54895985 54896676 + 1.34419216242945 NA intron (NM_001081433, intron 1 of 27) ID_B1|SINE|B4 30057 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_34_163_0.32389370990545_7.51949885957081_1.3441921624294 chr12 108054318 108055123 + 1.3441921624294 NA Intergenic Intergenic -51306 NM_021399 58208 Mm.392694 NM_021399 ENSMUSG00000048251 Bcl11b 9130430L19Rik|AI604821|B630002E05Rik|BCL-11B|Ctip2|Rit1 B cell leukemia/lymphoma 11B protein-coding common_peak2_34_163_0.32389370990545_7.51949885957081_1.3441921624294 chr2 101628377 101629094 + 1.3441921624294 NA intron (NM_009020, intron 2 of 2) intron (NM_009020, intron 2 of 2) 251 NM_026592 68170 Mm.31263 NM_026592 ENSMUSG00000027165 B230118H07Rik NWC RIKEN cDNA B230118H07 gene protein-coding common_peak1_17_123_-0.449510948514208_6.72944083612977_1.34399697929457 chr1 138161122 138161510 + 1.34399697929457 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 13810 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding unique_peak2_17_123_-0.449510948514208_6.72944083612977_1.34399697929457-2 chr6 66414407 66415575 + 1.34399697929457 NA Intergenic Intergenic -120477 NM_019499 56150 Mm.489653 NM_019499 ENSMUSG00000029910 Mad2l1 AA673185|MAD2 MAD2 mitotic arrest deficient-like 1 protein-coding unique_peak2_17_123_-0.449510948514208_6.72944083612977_1.34399697929457 chr11 121558523 121559730 + 1.34399697929457 NA intron (NM_029878, intron 16 of 38) intron (NM_029878, intron 16 of 38) -39784 NM_178763 319530 Mm.11395 NM_178763 ENSMUSG00000039238 Zfp750 A030007D23Rik|Znf750 zinc finger protein 750 protein-coding unique_peak2_17_123_-0.449510948514208_6.72944083612977_1.34399697929457-3 chr7 117428137 117429164 + 1.34399697929457 NA intron (NM_175645, intron 1 of 11) intron (NM_175645, intron 1 of 11) 47671 NM_175645 233781 Mm.461427 NM_175645 ENSMUSG00000030657 Xylt1 8030490L12 xylosyltransferase 1 protein-coding common_peak1_22_91_0.414898848036497_6.73101138007526_1.34399697929457 chr19 21603685 21604277 + 1.34399697929457 NA intron (NM_025423, intron 2 of 3) intron (NM_025423, intron 2 of 3) 48810 NM_025423 66206 Mm.272430 NM_025423 ENSMUSG00000035171 1110059E24Rik - RIKEN cDNA 1110059E24 gene protein-coding common_peak1_17_123_-0.449510948514208_6.72944083612977_1.34399697929457-2 chr13 20093620 20094072 + 1.34399697929457 NA intron (NM_080288, intron 1 of 21) intron (NM_080288, intron 1 of 21) 3339 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding unique_peak2_9_67_-0.62294092480592_5.77599237884738_1.34343841539451-2 chr8 123342396 123343015 + 1.34343841539451 NA intron (NM_172287, intron 1 of 14) intron (NM_172287, intron 1 of 14) 9992 NM_172287 234857 Mm.150200 NM_172287 ENSMUSG00000010154 Spire2 BC026502|Spir-2|Spir2 spire homolog 2 (Drosophila) protein-coding unique_peak2_9_67_-0.62294092480592_5.77599237884738_1.34343841539451 chr3 104761794 104762400 + 1.34343841539451 NA Intergenic Intergenic 15450 NM_183224 329731 Mm.389494 NM_183224 ENSMUSG00000055865 Fam19a3 7530404M11Rik|TAFA3|Tafa-3 family with sequence similarity 19, member A3 protein-coding unique_peak1_13_44_0.568099342501895_5.77590276758062_1.34343841539451 chr6 128200868 128201274 + 1.34343841539451 NA Intergenic Intergenic -17268 NR_077223 330427 Mm.426356 NR_077223 ENSMUSG00000107879 9330102E08Rik - RIKEN cDNA 9330102E08 gene ncRNA common_peak2_109_928_-0.151631456810382_9.78371905797746_1.34341569325592 chr5 115016844 115019666 + 1.34341569325592 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 6731 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak1_21_85_0.433532987991853_6.64303124869802_1.34338701864341 chr10 39392954 39393514 + 1.34338701864341 NA intron (NM_008054, intron 1 of 13) intron (NM_008054, intron 1 of 13) 23435 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_21_85_0.433532987991853_6.64303124869802_1.34338701864341-5 chr3 154093645 154094180 + 1.34338701864341 NA intron (NM_001081263, intron 1 of 21) intron (NM_001081263, intron 1 of 21) 120476 NM_001081263 242259 Mm.239962 NM_001081263 ENSMUSG00000028360 Slc44a5 AA117069|Gm422 solute carrier family 44, member 5 protein-coding unique_peak2_21_85_0.433532987991853_6.64303124869802_1.34338701864341-2 chr5 8669649 8670542 + 1.34338701864341 NA intron (NM_011076, intron 3 of 27) intron (NM_011076, intron 3 of 27) 10003 NM_011076 18671 Mm.207354 NM_011076 ENSMUSG00000040584 Abcb1a Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3 ATP-binding cassette, sub-family B (MDR/TAP), member 1A protein-coding common_peak1_21_85_0.433532987991853_6.64303124869802_1.34338701864341-6 chr7 4995740 4996259 + 1.34338701864341 NA intron (NM_026741, intron 1 of 1) CpG 102 NM_026741 68490 Mm.76400 NM_026741 ENSMUSG00000051550 Zfp579 1110003A17Rik|Znf579 zinc finger protein 579 protein-coding common_peak1_21_85_0.433532987991853_6.64303124869802_1.34338701864341-3 chr11 88599056 88599537 + 1.34338701864341 NA intron (NM_054043, intron 5 of 13) intron (NM_054043, intron 5 of 13) -19955 NR_131025 68397 Mm.426889 NR_131025 0610039H22Rik - RIKEN cDNA 0610039H22 gene ncRNA common_peak1_21_85_0.433532987991853_6.64303124869802_1.34338701864341-4 chr15 36938145 36938674 + 1.34338701864341 NA Intergenic Intergenic 68993 NM_026521 68036 Mm.371631 NM_026521 ENSMUSG00000062397 Zfp706 3110006P09Rik|AA793007|AW536850|C77232|Znf706 zinc finger protein 706 protein-coding common_peak1_21_85_0.433532987991853_6.64303124869802_1.34338701864341-7 chr8 122870428 122871021 + 1.34338701864341 NA Intergenic CpG 22350 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding common_peak1_21_85_0.433532987991853_6.64303124869802_1.34338701864341-2 chr10 96724861 96725295 + 1.34338701864341 NA Intergenic Intergenic 108077 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak2_21_85_0.433532987991853_6.64303124869802_1.34338701864341 chr7 80828542 80829196 + 1.34338701864341 NA Intergenic Intergenic -25538 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_21_85_0.433532987991853_6.64303124869802_1.34338701864341-2 chr7 84679281 84679995 + 1.34338701864341 NA promoter-TSS (NM_022985) promoter-TSS (NM_022985) -287 NM_022985 65098 Mm.209349 NM_022985 ENSMUSG00000030629 Zfand6 3110005P07Rik|Awp1|Za20d3 zinc finger, AN1-type domain 6 protein-coding unique_peak2_21_85_0.433532987991853_6.64303124869802_1.34338701864341 chr2 119787116 119787672 + 1.34338701864341 NA intron (NM_177294, intron 1 of 25) intron (NM_177294, intron 1 of 25) 143 NM_177294 68925 Mm.30496 NM_177294 ENSMUSG00000034032 Rpap1 1190005L06Rik|A730023M06Rik|AU041788|AW107702|mKIAA1403 RNA polymerase II associated protein 1 protein-coding common_peak1_16_116_-0.466828458609233_6.63695049027879_1.34338701864338-4 chr6 97214149 97214515 + 1.34338701864338 NA intron (NM_022992, intron 1 of 2) CT-rich|Low_complexity|Low_complexity 3540 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak1_16_116_-0.466828458609233_6.63695049027879_1.34338701864338-3 chr6 85451041 85451393 + 1.34338701864338 NA promoter-TSS (NM_028505) promoter-TSS (NM_028505) 85 NM_001163427 73327 Mm.379221 NM_028505 ENSMUSG00000030008 Pradc1 1700040I03Rik|Pap21 protease-associated domain containing 1 protein-coding common_peak1_16_116_-0.466828458609233_6.63695049027879_1.34338701864338-2 chr5 151650972 151651334 + 1.34338701864338 NA promoter-TSS (NM_027009) promoter-TSS (NM_027009) 55 NM_027009 69263 Mm.12553 NM_027009 ENSMUSG00000033970 Rfc3 2810416I22Rik|38kDa|AU022547|Recc3 replication factor C (activator 1) 3 protein-coding unique_peak2_16_116_-0.466828458609233_6.63695049027879_1.34338701864338 chr3 157575451 157576244 + 1.34338701864338 NA intron (NM_011196, intron 1 of 2) intron (NM_011196, intron 1 of 2) 8955 NM_011196 19218 Mm.30424 NM_011196 ENSMUSG00000040016 Ptger3 EP3|Pgerep3|Ptgerep3 prostaglandin E receptor 3 (subtype EP3) protein-coding common_peak1_16_116_-0.466828458609233_6.63695049027879_1.34338701864338 chr11 117266651 117267064 + 1.34338701864338 NA intron (NM_001113487, intron 1 of 10) intron (NM_001113487, intron 1 of 10) 611 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_82_519_0.187138056139894_9.1159368410984_1.34334479836086 chr13 113071188 113072414 + 1.34334479836086 NA intron (NM_001281487, intron 5 of 11) intron (NM_001281487, intron 5 of 11) -25413 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak1_93_611_0.172355555919724_9.34356562065251_1.34334359478692 chr13 95374580 95375621 + 1.34334359478692 NA 5' UTR (NM_025630, exon 1 of 14) 5' UTR (NM_025630, exon 1 of 14) 257 NM_025630 66549 Mm.36785 NM_025630 ENSMUSG00000021681 Aggf1 2010009L17Rik|2310029P06Rik|AW112072|Peg3|VG5Q angiogenic factor with G patch and FHA domains 1 protein-coding common_peak2_111_948_-0.150474904630473_9.81502682470587_1.34314878640482 chr8 122442918 122445596 + 1.34314878640482 NA promoter-TSS (NR_028354) promoter-TSS (NR_028354) 601 NR_045696 100689703 Mm.271989 NR_045696 9330133O14Rik - RIKEN cDNA 9330133O14 gene ncRNA common_peak2_77_624_-0.188156618755231_9.19363407017183_1.34304776293083 chr7 127744735 127746589 + 1.34304776293083 NA Intergenic Intergenic -1113 NM_172748 233902 Mm.259353 NM_172748 ENSMUSG00000030811 Fbxl19 6030430O11|BC059812|Fbl19 F-box and leucine-rich repeat protein 19 protein-coding common_peak1_75_462_0.198720442509368_8.95422860451492_1.34299533527353 chr7 89338266 89338928 + 1.34299533527353 NA 5' UTR (NM_028343, exon 1 of 15) 5' UTR (NM_028343, exon 1 of 15) 190 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding common_peak2_75_462_0.198720442509368_8.95422860451492_1.34299533527353 chr17 6315562 6317851 + 1.34299533527353 NA intron (NM_001166629, intron 1 of 4) intron (NM_001166629, intron 1 of 4) 768 NM_001166629 100310872 Mm.381893 NM_001166629 ENSMUSG00000092074 Dynlt1a - dynein light chain Tctex-type 1A protein-coding common_peak2_138_1013_0.13614284378926_10.053913358898_1.34285049301976 chr19 4147508 4149889 + 1.34285049301976 NA promoter-TSS (NM_011778) promoter-TSS (NM_011778) 35 NM_011778 23789 Mm.276859 NM_011778 ENSMUSG00000024835 Coro1b - coronin, actin binding protein 1B protein-coding common_peak1_107_909_-0.154290545873751_9.75257746214918_1.34273778026903 chr17 31564775 31565886 + 1.34273778026903 NA intron (NM_016670, intron 1 of 10) CpG 557 NM_016670 18771 Mm.259295 NM_016670 ENSMUSG00000006705 Pknox1 D17Wsu76e|PREP1 Pbx/knotted 1 homeobox protein-coding common_peak1_38_189_0.303087841276913_7.7213995289694_1.34253438460175-5 chr6 50110224 50110727 + 1.34253438460175 NA intron (NM_001164734, intron 1 of 13) CpG 234 NM_001164733 56524 Mm.41288 NM_008016 ENSMUSG00000038388 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) protein-coding common_peak1_38_189_0.303087841276913_7.7213995289694_1.34253438460175-3 chr15 101173591 101174325 + 1.34253438460175 NA promoter-TSS (NM_007395) promoter-TSS (NM_007395) -167 NM_007395 11479 Mm.308467 NM_007395 ENSMUSG00000000532 Acvr1b 6820432J04|ActR-IB|ActRIB|Acvrlk4|Alk4|SKR2 activin A receptor, type 1B protein-coding common_peak1_38_189_0.303087841276913_7.7213995289694_1.34253438460175-2 chr12 102621343 102622034 + 1.34253438460175 NA intron (NM_172584, intron 3 of 9) intron (NM_172584, intron 3 of 9) 63332 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_38_189_0.303087841276913_7.7213995289694_1.34253438460175 chr10 93342576 93343497 + 1.34253438460175 NA intron (NR_038014, intron 1 of 2) intron (NR_038014, intron 1 of 2) 6804 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak1_38_189_0.303087841276913_7.7213995289694_1.34253438460175-4 chr17 53587402 53588143 + 1.34253438460175 NA intron (NM_001190846, intron 1 of 17) L2a|LINE|L2 3646 NM_001190846 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding unique_peak2_38_189_0.303087841276913_7.7213995289694_1.34253438460175 chr19 32868722 32870041 + 1.34253438460175 NA Intergenic Intergenic 111804 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1 phosphatase and tensin homolog protein-coding common_peak2_33_244_-0.306489366842044_7.78339325558155_1.34247032527832 chr11 80067256 80068661 + 1.34247032527832 NA intron (NM_018776, intron 1 of 7) intron (NM_018776, intron 1 of 7) 13033 NM_001277106 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding unique_peak2_33_244_-0.306489366842044_7.78339325558155_1.34247032527832 chr2 150217632 150218804 + 1.34247032527832 NA intron (NM_001142411, intron 1 of 3) intron (NM_001142411, intron 1 of 3) 119 NM_001142411 245174 Mm.378428 NM_001142411 ENSMUSG00000060336 Zfp937 EG245174|Gm4979|ZIPO-I zinc finger protein 937 protein-coding unique_peak2_29_132_0.353373997096513_7.23196943404945_1.34206746660558-2 chr4 24897957 24898679 + 1.34206746660558 NA intron (NM_026742, intron 1 of 2) CpG 235 NM_026742 68493 Mm.204831 NM_026742 ENSMUSG00000028261 Ndufaf4 1110007M04Rik|3000003G13Rik|AW214064 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4 protein-coding common_peak2_29_132_0.353373997096513_7.23196943404945_1.34206746660558 chr8 122953926 122954980 + 1.34206746660558 NA intron (NR_037865, intron 2 of 13) intron (NR_037865, intron 2 of 13) 87831 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_29_132_0.353373997096513_7.23196943404945_1.34206746660558 chr11 100841576 100842201 + 1.34206746660558 NA intron (NM_001113563, intron 1 of 18) intron (NM_001113563, intron 1 of 18) 8697 NM_001113563 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding unique_peak2_29_132_0.353373997096513_7.23196943404945_1.34206746660558 chr2 29643215 29644360 + 1.34206746660558 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 24067 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_95_628_0.170083883585519_9.38195814867205_1.34187883965057 chr16 10782233 10783307 + 1.34187883965057 NA Intergenic Intergenic 2766 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding common_peak2_143_1272_-0.129494408469622_10.2492694996665_1.34111037923072 chr12 99639378 99644069 + 1.34111037923072 NA Intergenic Intergenic -13749 NR_045288 73457 Mm.383439 NR_045288 ENSMUSG00000100211 1700064M15Rik - RIKEN cDNA 1700064M15 gene ncRNA common_peak1_97_645_0.168098193403116_9.41943945139548_1.34080610257574 chr3 142549823 142551213 + 1.34080610257574 NA TTS (NM_001083312) TTS (NM_001083312) -9534 NM_018734 55932 Mm.439718 NM_018734 ENSMUSG00000028268 Gbp3 AW228655|GBP-3|GBP-4|Gbp4 guanylate binding protein 3 protein-coding common_peak1_88_726_-0.172793185155406_9.41941496134189_1.34080610257574 chr1 191182485 191183321 + 1.34080610257574 NA intron (NM_007498, intron 1 of 3) CpG 430 NM_007498 11910 Mm.2706 NM_007498 ENSMUSG00000026628 Atf3 LRG-21 activating transcription factor 3 protein-coding common_peak1_88_726_-0.172793185155406_9.41941496134189_1.34080610257574-2 chr2 166548876 166550393 + 1.34080610257574 NA Intergenic Intergenic 102183 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak1_323_3323_-0.0791379614047543_11.659135686068_1.34078003219325 chr13 95959626 95962390 + 1.34078003219325 NA 3' UTR (NM_029210, exon 13 of 13) 3' UTR (NM_029210, exon 13 of 13) -69086 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding common_peak2_213_2029_-0.101681281530409_10.9364233713073_1.34067963412692 chr2 25545038 25547832 + 1.34067963412692 NA intron (NM_009422, intron 1 of 10) intron (NM_009422, intron 1 of 10) 505 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding common_peak2_130_1138_-0.136464769861238_10.0853196467775_1.34060197920659 chr9 44766838 44768569 + 1.34060197920659 NA 5' UTR (NM_145985, exon 1 of 10) 5' UTR (NM_145985, exon 1 of 10) 105 NM_145985 213827 Mm.371682 NM_145985 ENSMUSG00000032096 Arcn1 4632432M07Rik|nur17 archain 1 protein-coding common_peak2_450_4936_-0.0645942515478204_12.2371218039672_1.34053093824991 chr17 6777068 6783732 + 1.34053093824991 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 2380 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_72_578_-0.195100511603608_9.07986928218743_1.34025551605625 chr9 94606212 94608651 + 1.34025551605625 NA Intergenic Intergenic -62461 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak1_210_1728_0.104877185496681_10.8081607463906_1.34014140251928 chr2 167334198 167336666 + 1.34014140251928 NA intron (NM_019835, intron 1 of 8) intron (NM_019835, intron 1 of 8) 13746 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak1_41_309_-0.272037450289384_8.14010568012955_1.33989032733213 chr11 106998653 106999630 + 1.33989032733213 NA intron (NM_010655, intron 1 of 10) CpG 384 NM_010655 16647 Mm.12508 NM_010655 ENSMUSG00000018362 Kpna2 2410044B12Rik|IPOA1|PTAC58|Rch1 karyopherin (importin) alpha 2 protein-coding common_peak1_208_1973_-0.103160657931655_10.8953259454906_1.339690861011 chr3 107035731 107038264 + 1.339690861011 NA exon (NM_008418, exon 1 of 1) exon (NM_008418, exon 1 of 1) 835 NM_008418 16491 Mm.30640 NM_008418 ENSMUSG00000047959 Kcna3 Kca1-3|Kv1.3|Mk-3 potassium voltage-gated channel, shaker-related subfamily, member 3 protein-coding common_peak1_37_276_-0.286765651465942_7.97035934031622_1.33919756435386-2 chr13 23622701 23623268 + 1.33919756435386 NA promoter-TSS (NM_015787) promoter-TSS (NM_015787) -426 NM_015787 50709 Mm.170587 NM_015787 ENSMUSG00000051627 Hist1h1e H1-4|H1.4|H1e|H1f4|H1s-4|H1var2 histone cluster 1, H1e protein-coding common_peak2_37_276_-0.286765651465942_7.97035934031622_1.33919756435386 chr8 40609382 40610942 + 1.33919756435386 NA intron (NM_001040699, intron 1 of 13) IAPLTR2a|LTR|ERVK 24630 NM_001040699 54384 Mm.294871 NM_019433 ENSMUSG00000039431 Mtmr7 - myotubularin related protein 7 protein-coding common_peak1_37_276_-0.286765651465942_7.97035934031622_1.33919756435386 chr10 79994096 79994981 + 1.33919756435386 NA exon (NM_007725, exon 7 of 7) exon (NM_007725, exon 7 of 7) -3077 NM_013850 27403 Mm.103351 NM_013850 ENSMUSG00000035722 Abca7 ABCX|Abc51 ATP-binding cassette, sub-family A (ABC1), member 7 protein-coding common_peak1_65_384_0.215217623264973_8.69632344721475_1.33915862494365 chr14 32165129 32166055 + 1.33915862494365 NA promoter-TSS (NM_001284319) promoter-TSS (NM_001284319) 6 NM_001284319 27057 Mm.371598 NM_019744 ENSMUSG00000056234 Ncoa4 ARA70|Rfg nuclear receptor coactivator 4 protein-coding common_peak1_65_384_0.215217623264973_8.69632344721475_1.33915862494365-2 chr4 108349082 108350039 + 1.33915862494365 NA Intergenic Intergenic 21408 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding common_peak1_70_423_0.205239091283818_8.83054000020511_1.33910099679276 chr16 55966069 55966955 + 1.33910099679276 NA intron (NM_024218, intron 1 of 5) CpG 237 NM_024218 68193 Mm.29221 NM_024218 ENSMUSG00000098274 Rpl24 0610008L05Rik|Bst ribosomal protein L24 protein-coding common_peak1_128_1118_-0.13813263456916_10.0589280036918_1.33894379422043 chr11 69632326 69633793 + 1.33894379422043 NA promoter-TSS (NM_011814) promoter-TSS (NM_011814) 88 NM_011814 23879 Mm.41930 NM_011814 ENSMUSG00000018765 Fxr2 Fxr2h fragile X mental retardation, autosomal homolog 2 protein-coding common_peak1_128_1118_-0.13813263456916_10.0589280036918_1.33894379422043-2 chr9 58582352 58583558 + 1.33894379422043 NA intron (NM_009145, intron 1 of 7) intron (NM_009145, intron 1 of 7) 715 NM_009145 20320 Mm.15125 NM_009145 ENSMUSG00000032336 Nptn AW554172|SDR-1|Sdfr1 neuroplastin protein-coding common_peak2_67_533_-0.203935048340671_8.95872840751722_1.33880822456009 chr5 123906278 123908054 + 1.33880822456009 NA promoter-TSS (NM_026603) promoter-TSS (NM_026603) -109 NM_026603 68184 Mm.28549 NM_026603 ENSMUSG00000023106 Denr 1500003K04Rik density-regulated protein protein-coding common_peak1_67_533_-0.203935048340671_8.95872840751722_1.33880822456009 chr3 122292971 122294084 + 1.33880822456009 NA TTS (NR_030439) TTS (NR_030439) 176 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA common_peak1_145_1080_0.130780529837336_10.1435410726533_1.33879115416095 chr5 23615858 23617530 + 1.33879115416095 NA promoter-TSS (NM_009274) promoter-TSS (NM_009274) -123 NM_009274 20817 Mm.288728 NM_009274 ENSMUSG00000062604 Srpk2 AW226533|AW492537|AW547358|Wbp6|mSRPK2 serine/arginine-rich protein specific kinase 2 protein-coding common_peak1_171_1567_-0.115758051488545_10.5568308183709_1.33876951489325 chr7 139949785 139951741 + 1.33876951489325 NA Intergenic Intergenic 6859 NR_106157 102465788 NR_106157 ENSMUSG00000105165 Mir7686 mmu-mir-7686 microRNA 7686 ncRNA common_peak1_86_552_0.181662160431145_9.20196675045028_1.33773768376452 chr17 24527271 24528115 + 1.33773768376452 NA promoter-TSS (NR_045289) promoter-TSS (NR_045289) 245 NM_153792 224619 Mm.275150 NM_153792 ENSMUSG00000052752 Traf7 RFWD1 TNF receptor-associated factor 7 protein-coding common_peak2_81_660_-0.18045088525591_9.27828101887974_1.33746658656616 chr10 24148774 24150175 + 1.33746658656616 NA 5' UTR (NM_016797, exon 1 of 10) 5' UTR (NM_016797, exon 1 of 10) 157 NM_016797 53331 Mm.248042 NM_016797 ENSMUSG00000019998 Stx7 AI315064|AI317144|AW107239|Syn7 syntaxin 7 protein-coding common_peak1_19_74_0.462315537134896_6.45997645906333_1.33745248687389-4 chr5 144254032 144254565 + 1.33745248687389 NA promoter-TSS (NM_018772) promoter-TSS (NM_018772) -927 NM_018772 55950 Mm.38011 NM_018772 ENSMUSG00000047843 Bri3 I3 brain protein I3 protein-coding common_peak2_19_74_0.462315537134896_6.45997645906333_1.33745248687389 chr2 30495787 30496458 + 1.33745248687389 NA Intergenic Intergenic -21923 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak1_19_74_0.462315537134896_6.45997645906333_1.33745248687389 chr11 115054240 115054712 + 1.33745248687389 NA exon (NM_172050, exon 3 of 4) exon (NM_172050, exon 3 of 4) -6181 NM_199201 382551 Mm.424732 NM_199201 ENSMUSG00000069607 Cd300ld3 AY457049|Cd300lh|Clm3|Lmir7|clm-3 CD300 molecule like family member D3 protein-coding common_peak1_19_74_0.462315537134896_6.45997645906333_1.33745248687389-6 chr8 86891615 86892030 + 1.33745248687389 NA Intergenic MLTR11A|LTR|ERVK -6564 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak1_19_74_0.462315537134896_6.45997645906333_1.33745248687389-3 chr4 16168644 16169015 + 1.33745248687389 NA intron (NR_045765, intron 1 of 6) intron (NR_045765, intron 1 of 6) 4719 NR_045765 100415915 Mm.387180 NR_045765 ENSMUSG00000085112 A530072M11Rik - RIKEN cDNA gene A530072M11 ncRNA common_peak2_19_74_0.462315537134896_6.45997645906333_1.33745248687389-2 chr7 126746311 126746924 + 1.33745248687389 NA Intergenic Intergenic -13009 NM_011952 26417 Mm.8385 NM_011952 ENSMUSG00000063065 Mapk3 Erk-1|Erk1|Ert2|Esrk1|Mnk1|Mtap2k|Prkm3|p44|p44erk1|p44mapk mitogen-activated protein kinase 3 protein-coding common_peak1_19_74_0.462315537134896_6.45997645906333_1.33745248687389-2 chr13 52727276 52727724 + 1.33745248687389 NA Intergenic L1M4c|LINE|L1 29705 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak1_19_74_0.462315537134896_6.45997645906333_1.33745248687389-5 chr7 80936863 80937307 + 1.33745248687389 NA intron (NM_019951, intron 1 of 5) intron (NM_019951, intron 1 of 5) 10465 NM_019951 56529 Mm.43760 NM_019951 ENSMUSG00000025724 Sec11a 1810012E07Rik|18kDa|Sec11l1|Sid2895p|Spc18|sid2895 SEC11 homolog A, signal peptidase complex subunit protein-coding unique_peak2_27_197_-0.342791870061684_7.45796068504877_1.3374313602778 chr2 27198207 27199619 + 1.3374313602778 NA intron (NM_138665, intron 17 of 20) intron (NM_138665, intron 17 of 20) 33406 NM_138942 13166 Mm.167781 NM_138942 ENSMUSG00000000889 Dbh - dopamine beta hydroxylase protein-coding common_peak2_148_1323_-0.125762404699596_10.3078062044574_1.33742831495074 chr14 55680747 55682738 + 1.33742831495074 NA promoter-TSS (NM_145705) promoter-TSS (NM_145705) 75 NM_145705 28113 Mm.29346 NM_145705 ENSMUSG00000007589 Tinf2 AW552114|D14Wsu146e|Tin2 Terf1 (TRF1)-interacting nuclear factor 2 protein-coding common_peak1_176_1621_-0.113897183022164_10.6066095127062_1.33719783875681 chr12 111538132 111539287 + 1.33719783875681 NA intron (NM_178041, intron 2 of 11) CpG-3539 608 NM_173363 217869 Mm.271222 NM_173363 ENSMUSG00000021282 Eif5 2810011H21Rik|D12Ertd549e eukaryotic translation initiation factor 5 protein-coding common_peak1_77_479_0.1926651651857_9.00322317820137_1.33687169719654-2 chr4 57955433 57956315 + 1.33687169719654 NA intron (NM_011660, intron 1 of 4) CpG 537 NM_011660 22166 Mm.260618 NM_011660 ENSMUSG00000028367 Txn1 ADF|AW550880|Trx1|Txn thioredoxin 1 protein-coding common_peak1_77_479_0.1926651651857_9.00322317820137_1.33687169719654 chr2 151038600 151039969 + 1.33687169719654 NA promoter-TSS (NM_026086) promoter-TSS (NM_026086) 95 NM_026086 67311 Mm.480682 NM_026086 ENSMUSG00000053916 Nanp 1600031M04Rik|Hdhd4 N-acetylneuraminic acid phosphatase protein-coding common_peak1_92_764_-0.168499216692425_9.4950663292338_1.33684384579117 chr1 173431939 173433321 + 1.33684384579117 NA intron (NM_001013779, intron 2 of 8) intron (NM_001013779, intron 2 of 8) 12026 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_143_1061_0.131954244627583_10.1185451731179_1.33677767247401 chr19 41847432 41848463 + 1.33677767247401 NA 5' UTR (NM_177603, exon 1 of 1) 5' UTR (NM_177603, exon 1 of 1) 185 NM_177603 212398 Mm.222723 NM_177603 ENSMUSG00000047604 Frat2 - frequently rearranged in advanced T cell lymphomas 2 protein-coding common_peak1_48_258_0.26006794922413_8.14684226229862_1.33622207608451 chr8 91313339 91313973 + 1.33622207608451 NA promoter-TSS (NM_173431) promoter-TSS (NM_173431) 131 NM_011936 26383 Mm.4375 NM_011936 ENSMUSG00000055932 Fto AW743446|mKIAA1752 fat mass and obesity associated protein-coding common_peak1_137_1210_-0.132775518261179_10.1755953905637_1.33553100958738 chr10 75590016 75591681 + 1.33553100958738 NA intron (NM_011820, intron 1 of 11) intron (NM_011820, intron 1 of 11) 1467 NM_011820 23887 Mm.257927 NM_011820 ENSMUSG00000006344 Ggt5 AI551243|GGL|GGT-REL|Ggtla1 gamma-glutamyltransferase 5 protein-coding common_peak2_191_1784_-0.108095957265299_10.7476603802838_1.33549564055372 chr5 53997846 54000485 + 1.33549564055372 NA intron (NM_001081103, intron 1 of 11) CpG 642 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak1_120_1037_-0.143023883722433_9.94807878649667_1.33489894937726 chr2 165169032 165170712 + 1.33489894937726 NA intron (NM_174988, intron 3 of 11) intron (NM_174988, intron 3 of 11) 64865 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak1_214_2040_-0.101227709900447_10.9444466120825_1.33487655805397 chr5 23717602 23719990 + 1.33487655805397 NA Intergenic Intergenic -6129 NR_015554 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak2_69_550_-0.197850482861268_9.00698326714052_1.33485724535304 chr3 89411205 89412547 + 1.33485724535304 NA promoter-TSS (NM_177041) promoter-TSS (NM_177041) -13 NM_177041 319945 Mm.258142 NM_177041 ENSMUSG00000042642 Flad1 A930017E24Rik|Pp591 flavin adenine dinucleotide synthetase 1 protein-coding common_peak2_352_3315_0.0760389191642119_11.7332477510779_1.33427376257349 chr10 116580191 116583472 + 1.33427376257349 NA promoter-TSS (NM_001037846) promoter-TSS (NM_001037846) -320 NM_001037846 72068 Mm.351553 NM_028082 ENSMUSG00000020166 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650 CCR4-NOT transcription complex, subunit 2 protein-coding common_peak1_135_1189_-0.133372663662065_10.1500595263643_1.33422436761294 chr16 32332149 32333481 + 1.33422436761294 NA intron (NM_177633, intron 1 of 10) CpG 563 NM_177633 224111 Mm.31275 NM_177633 ENSMUSG00000053774 Ubxn7 A630090P18|AI196514|Ubxd7|mKIAA0794 UBX domain protein 7 protein-coding common_peak2_62_361_0.221763272868577_8.61072752351749_1.33401110296073 chr2 62645235 62646702 + 1.33401110296073 NA 5' UTR (NM_027835, exon 1 of 16) 5' UTR (NM_027835, exon 1 of 16) 287 NM_027835 71586 Mm.136224 NM_027835 ENSMUSG00000026896 Ifih1 9130009C22Rik|Helicard|Hlcd|MDA5|RLR-2 interferon induced with helicase C domain 1 protein-coding common_peak1_20_80_0.437624640913874_6.55866232334156_1.33393931754314-2 chr6 90749082 90749492 + 1.33393931754314 NA intron (NM_001134384, intron 1 of 13) MIRb|SINE|MIR -32758 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_20_80_0.437624640913874_6.55866232334156_1.33393931754314 chr2 24962459 24962829 + 1.33393931754314 NA intron (NM_026044, intron 1 of 8) intron (NM_026044, intron 1 of 8) 222 NM_026044 67228 Mm.389248 NM_026044 ENSMUSG00000026975 Dph7 2810443J12Rik|AW060693|Wdr85 diphthamine biosynethesis 7 protein-coding common_peak2_20_80_0.437624640913874_6.55866232334156_1.33393931754314 chr10 111234721 111235304 + 1.33393931754314 NA intron (NM_001003717, intron 3 of 22) MER44D|DNA|TcMar-Tigger -63667 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding common_peak1_268_2353_0.0894605165305631_11.2456288633037_1.33392187669494 chr5 107648963 107651861 + 1.33392187669494 NA intron (NM_001289569, intron 11 of 12) intron (NM_001289569, intron 11 of 12) -16562 NR_046195 78443 Mm.490703 NR_046195 ENSMUSG00000085900 A930041C12Rik - RIKEN cDNA A930041C12 gene ncRNA common_peak1_286_2875_-0.0848685861084011_11.4474136673851_1.33382107874222 chr11 101551781 101553831 + 1.33382107874222 NA promoter-TSS (NM_009764) promoter-TSS (NM_009764) 152 NM_001252223 17966 Mm.784 NM_008676 ENSMUSG00000017119 Nbr1 mKIAA0049 neighbor of Brca1 gene 1 protein-coding common_peak1_83_679_-0.178691669966492_9.32004510115446_1.33379770639504 chr2 45100331 45102136 + 1.33379770639504 NA intron (NM_001289521, intron 1 of 8) intron (NM_001289521, intron 1 of 8) 9044 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak2_53_409_-0.230660221479495_8.5641499887657_1.3334158236215-2 chr9 66682330 66683790 + 1.3334158236215 NA Intergenic ORR1D2|LTR|ERVL-MaLR -30626 NM_178396 76459 Mm.277921 NM_178396 ENSMUSG00000032373 Car12 2310047E01Rik|AI314958|CA-XII|Ca12 carbonic anhydrase 12 protein-coding common_peak2_53_409_-0.230660221479495_8.5641499887657_1.3334158236215 chr11 98438197 98439245 + 1.3334158236215 NA exon (NM_025559, exon 2 of 4) exon (NM_025559, exon 2 of 4) 267 NM_025559 103742 Mm.259614 NM_025559 ENSMUSG00000002580 Mien1 1810046J19Rik|AI463380|Rdx12 migration and invasion enhancer 1 protein-coding common_peak2_72_439_0.200959312860968_8.88183936995515_1.3334027641021 chr5 110652749 110654219 + 1.3334027641021 NA promoter-TSS (NM_027156) promoter-TSS (NM_027156) 33 NM_027156 69663 Mm.5267 NM_027156 ENSMUSG00000029504 Ddx51 2310061O04Rik|AA537002|C81583|R75505 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 protein-coding common_peak1_64_506_-0.208927416670445_8.88137822866812_1.3334027641021 chr16 87431841 87432535 + 1.3334027641021 NA intron (NM_001081068, intron 1 of 29) CpG 418 NM_001081068 78913 Mm.249005 NM_001081068 ENSMUSG00000052299 Ltn1 4930528H02Rik|AV266914|C87237|Listerin|Rnf160|Zfp294 listerin E3 ubiquitin protein ligase 1 protein-coding common_peak1_72_439_0.200959312860968_8.88183936995515_1.3334027641021 chr1 106581151 106582592 + 1.3334027641021 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -35240 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_100_840_-0.159113796649686_9.6364050919303_1.33329960829186 chr1 153748884 153749937 + 1.33329960829186 NA promoter-TSS (NM_011882) promoter-TSS (NM_011882) -16 NM_011882 24014 Mm.259254 NM_011882 ENSMUSG00000066800 Rnasel E230029I04Rik ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) protein-coding unique_peak1_14_49_0.538187931636624_5.91295015559304_1.33296683454086 chr19 21918295 21918724 + 1.33296683454086 NA Intergenic Intergenic 140169 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding unique_peak2_32_236_-0.311423301237379_7.73303159827957_1.3327413537599 chr1 52639277 52640955 + 1.3327413537599 NA intron (NR_024590, intron 2 of 8) Lx7|LINE|L1 9411 NM_001142647 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding common_peak1_28_126_0.359978627740403_7.16867400064237_1.33249038857025 chr10 41595925 41596397 + 1.33249038857025 NA intron (NM_001303469, intron 3 of 20) intron (NM_001303469, intron 3 of 20) 10434 NM_001303469 75973 Mm.228517 NM_029493 ENSMUSG00000075225 Ccdc162 5033413D22Rik|Ccdc162p|Gm29096|Gm61|Gm6976 coiled-coil domain containing 162 protein-coding common_peak1_28_126_0.359978627740403_7.16867400064237_1.33249038857025-4 chr5 122391238 122391816 + 1.33249038857025 NA promoter-TSS (NM_019824) promoter-TSS (NM_019824) -401 NM_019824 56378 Mm.275942 NM_019824 ENSMUSG00000029465 Arpc3 1110006A04Rik|p21-ARC|p21-Ar|p21Arc actin related protein 2/3 complex, subunit 3 protein-coding common_peak1_28_126_0.359978627740403_7.16867400064237_1.33249038857025-2 chr4 108317995 108318629 + 1.33249038857025 NA Intergenic Intergenic -9840 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding common_peak1_28_126_0.359978627740403_7.16867400064237_1.33249038857025-3 chr5 113836066 113836722 + 1.33249038857025 NA Intergenic Intergenic -5893 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak2_33_157_0.326367823983424_7.46696466016881_1.33156622185173 chr19 5872048 5873169 + 1.33156622185173 NA intron (NM_026169, intron 3 of 10) intron (NM_026169, intron 3 of 10) 2600 NM_026169 67457 Mm.202092 NM_026169 ENSMUSG00000024816 Frmd8 1200004M23Rik|2310035N23Rik|4931429L16Rik|AU018809 FERM domain containing 8 protein-coding common_peak1_18_69_0.471081186451924_6.36482361017093_1.33151214593207 chr2 4588877 4589326 + 1.33151214593207 NA intron (NM_001177843, intron 15 of 23) intron (NM_001177843, intron 15 of 23) 29347 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294 FERM domain containing 4A protein-coding common_peak1_18_69_0.471081186451924_6.36482361017093_1.33151214593207-2 chr8 22185360 22185853 + 1.33151214593207 NA intron (NM_001004140, intron 1 of 8) CpG 213 NM_001004140 80986 Mm.22448 NM_001004140 ENSMUSG00000037725 Ckap2 AI461656|AW228814|LB1 cytoskeleton associated protein 2 protein-coding common_peak1_50_384_-0.241043858454807_8.46819270635486_1.33102710582698 chr5 62815145 62815951 + 1.33102710582698 NA intron (NM_001170705, intron 1 of 8) intron (NM_001170705, intron 1 of 8) 1725 NM_001170705 100322896 Mm.479821 NM_001170705 ENSMUSG00000090326 Dthd1 Gm17384 death domain containing 1 protein-coding common_peak2_50_384_-0.241043858454807_8.46819270635486_1.33102710582698 chr10 18963637 18965912 + 1.33102710582698 NA Intergenic Intergenic 47189 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_81_511_0.188055576251783_9.09402778812589_1.33074238023402 chr18 61554310 61555056 + 1.33074238023402 NA promoter-TSS (NM_146087) promoter-TSS (NM_146087) -899 NM_146087 93687 Mm.26908 NM_146087 ENSMUSG00000024576 Csnk1a1 2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a casein kinase 1, alpha 1 protein-coding common_peak1_41_210_0.282987766277669_7.86259307184602_1.3299193366344-2 chr6 49319056 49319859 + 1.3299193366344 NA 5' UTR (NM_175098, exon 1 of 3) 5' UTR (NM_175098, exon 1 of 3) 183 NM_001311112 57895 Mm.32416 NM_175098 ENSMUSG00000050786 Ccdc126 6330407D12Rik|AA675040|AI465320|AL022711 coiled-coil domain containing 126 protein-coding common_peak2_41_210_0.282987766277669_7.86259307184602_1.3299193366344-3 chr6 108525383 108526568 + 1.3299193366344 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 36232 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_41_210_0.282987766277669_7.86259307184602_1.3299193366344 chr13 35740328 35741191 + 1.3299193366344 NA promoter-TSS (NM_001123386) promoter-TSS (NM_001123386) -643 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding common_peak2_41_210_0.282987766277669_7.86259307184602_1.3299193366344 chr1 119836731 119837610 + 1.3299193366344 NA promoter-TSS (NM_019933) promoter-TSS (NM_019933) -99 NM_019933 19258 Mm.458796 NM_019933 ENSMUSG00000026384 Ptpn4 PTPMEG|Ptn4|TEP|TEP/mPTPMEG|hPTP-MEG protein tyrosine phosphatase, non-receptor type 4 protein-coding common_peak2_41_210_0.282987766277669_7.86259307184602_1.3299193366344-2 chr10 63386540 63387299 + 1.3299193366344 NA intron (NM_013888, intron 1 of 4) intron (NM_013888, intron 1 of 4) 356 NM_013888 30045 Mm.32550 NM_013888 ENSMUSG00000036764 Dnajc12 Jdp1|mJDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding common_peak1_71_568_-0.194374858061202_9.05509741327598_1.32962298201316 chr14 31829781 31830734 + 1.32962298201316 NA intron (NM_001024604, intron 1 of 27) CpG 158 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding common_peak2_87_716_-0.172806943635241_9.39942583688428_1.32954660738806 chr4 134594321 134596227 + 1.32954660738806 NA intron (NM_207237, intron 2 of 11) ORR1D2|LTR|ERVL-MaLR -27423 NR_105829 102465216 NR_105829 ENSMUSG00000099289 Mir6403 Gm27992|mmu-mir-6403 microRNA 6403 ncRNA common_peak1_61_479_-0.213596079687855_8.80009255576459_1.32931548575523 chrX 48427733 48428978 + 1.32931548575523 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 34777 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak1_187_1740_-0.109344777852369_10.7110280987249_1.32912806966351 chr6 48553920 48555625 + 1.32912806966351 NA promoter-TSS (NM_001110160) promoter-TSS (NM_001110160) -27 NM_001110160 243371 Mm.290764 NM_177736 ENSMUSG00000073096 Lrrc61 BC027309 leucine rich repeat containing 61 protein-coding common_peak1_94_620_0.17002033205473_9.36345962424785_1.32910228594834 chr9 42107383 42108550 + 1.32910228594834 NA intron (NM_011436, intron 1 of 47) intron (NM_011436, intron 1 of 47) 16323 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak1_66_523_-0.202879301387727_8.93198335084359_1.32853452933381 chr1 155058857 155060180 + 1.32853452933381 NA Intergenic Intergenic 40118 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak2_66_523_-0.202879301387727_8.93198335084359_1.32853452933381 chr9 21180864 21182669 + 1.32853452933381 NA intron (NR_106127, intron 1 of 3) CpG -2335 NM_001310750 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding common_peak2_37_183_0.303414558526233_7.67526923532013_1.32836596631208 chrX 101733310 101734393 + 1.32836596631208 NA intron (NM_009910, intron 1 of 1) intron (NM_009910, intron 1 of 1) 296 NM_009910 12766 Mm.12876 NM_009910 ENSMUSG00000050232 Cxcr3 Cd183|Cmkar3 chemokine (C-X-C motif) receptor 3 protein-coding common_peak1_37_183_0.303414558526233_7.67526923532013_1.32836596631208 chr19 33222405 33223042 + 1.32836596631208 NA intron (NM_001167818, intron 4 of 6) intron (NM_001167818, intron 4 of 6) 169572 NM_001167818 67795 Mm.204591 NM_001146342 ENSMUSG00000071573 Rnls 6530404N21Rik|AI452315|AW060440|C10orf59 renalase, FAD-dependent amine oxidase protein-coding common_peak1_59_339_0.225877807646357_8.52232983996088_1.32775862406969 chr15 35937275 35938207 + 1.32775862406969 NA intron (NM_053071, intron 1 of 3) CpG 505 NM_053071 12864 Mm.548 NM_053071 ENSMUSG00000014313 Cox6c - cytochrome c oxidase subunit VIc protein-coding common_peak1_116_812_0.149966423686118_9.74209475391809_1.32769382596823 chr10 122794190 122795439 + 1.32769382596823 NA intron (NM_176919, intron 2 of 8) intron (NM_176919, intron 2 of 8) 115499 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak1_15_54_0.514893549600508_6.03880648832491_1.32755441273623-2 chr9 62372581 62373127 + 1.32755441273623 NA intron (NM_009672, intron 3 of 6) intron (NM_009672, intron 3 of 6) 31511 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_15_54_0.514893549600508_6.03880648832491_1.32755441273623 chr8 121573175 121573474 + 1.32755441273623 NA intron (NM_133765, intron 1 of 8) intron (NM_133765, intron 1 of 8) 5482 NM_133765 76454 Mm.24829 NM_133765 ENSMUSG00000052934 Fbxo31 1110003O08Rik|2310046N15Rik|Fbx14|Fbxo14 F-box protein 31 protein-coding unique_peak1_15_54_0.514893549600508_6.03880648832491_1.32755441273623 chr13 30817765 30818160 + 1.32755441273623 NA intron (NM_025588, intron 27 of 27) intron (NM_025588, intron 27 of 27) 68704 NM_013674 16364 Mm.4677 NM_013674 ENSMUSG00000021356 Irf4 AI385587|IRF-4|LSIRF|NF-EM5|Spip interferon regulatory factor 4 protein-coding common_peak1_17_64_0.482317548844213_6.26352658745056_1.32755114337413-2 chr14 100212375 100212876 + 1.32755114337413 NA Intergenic B4|SINE|B4 -62829 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding common_peak1_17_64_0.482317548844213_6.26352658745056_1.32755114337413 chr1 165840020 165840436 + 1.32755114337413 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 51547 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding common_peak1_138_1219_-0.130680651657647_10.1873251066214_1.32754401592455 chr2 73910462 73911877 + 1.32754401592455 NA intron (NM_001301722, intron 1 of 4) CpG-8181 157 NM_175015 228033 Mm.2966 NM_175015 ENSMUSG00000018770 Atp5g3 6030447M23 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) protein-coding common_peak2_147_1312_-0.125642927308762_10.2958297372385_1.32716703167356 chr17 55891347 55893158 + 1.32716703167356 NA intron (NM_145490, intron 1 of 3) CpG 159 NM_145490 224893 Mm.294853 NM_145490 ENSMUSG00000003198 Zfp959 - zinc finger protein 959 protein-coding common_peak2_69_415_0.207618307568797_8.80424887192549_1.32701358298631 chr13 24374417 24376673 + 1.32701358298631 NA intron (NM_001284519, intron 2 of 17) B4|SINE|B4 -39577 NM_007717 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding common_peak1_44_230_0.274429596148575_7.98896383949034_1.32692157660039 chr2 128294464 128295149 + 1.32692157660039 NA Intergenic Intergenic 134545 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak2_106_723_0.159124532272568_9.57940815321949_1.32630484799269 chr4 32656317 32657852 + 1.32630484799269 NA promoter-TSS (NM_001081392) promoter-TSS (NM_001081392) -35 NM_001081392 100019 Mm.24627 NM_133874 ENSMUSG00000058006 Mdn1 4833432B22Rik|A130070M06|AA958993|D4Abb1e|Gm135 midasin AAA ATPase 1 protein-coding common_peak1_16_59_0.496645665365653_6.15521342829135_1.32602788216269-2 chr8 79710787 79711166 + 1.32602788216269 NA promoter-TSS (NM_026904) promoter-TSS (NM_026904) 764 NM_015751 24015 Mm.5831 NM_015751 ENSMUSG00000058355 Abce1 C79080|Oabp|RLI|RNS41|Rnaseli ATP-binding cassette, sub-family E (OABP), member 1 protein-coding common_peak1_16_59_0.496645665365653_6.15521342829135_1.32602788216269 chr2 166628861 166629208 + 1.32602788216269 NA intron (NM_177782, intron 5 of 39) intron (NM_177782, intron 5 of 39) -43684 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA unique_peak1_16_59_0.496645665365653_6.15521342829135_1.32602788216269 chr19 37514605 37514974 + 1.32602788216269 NA Intergenic Intergenic -35629 NM_175353 107371 Mm.24865 NM_175353 ENSMUSG00000053799 Exoc6 4833405E05Rik|AW413330|C430002C19|Sec15|Sec15l1|hbd|msec15 exocyst complex component 6 protein-coding common_peak1_123_1067_-0.140789104580536_9.99030137939729_1.32572947425864 chr14 55680917 55682028 + 1.32572947425864 NA exon (NM_145705, exon 1 of 9) exon (NM_145705, exon 1 of 9) 345 NM_145705 28113 Mm.29346 NM_145705 ENSMUSG00000007589 Tinf2 AW552114|D14Wsu146e|Tin2 Terf1 (TRF1)-interacting nuclear factor 2 protein-coding common_peak1_151_1138_0.126649105247846_10.216876584332_1.32566152826036 chr9 65031883 65033355 + 1.32566152826036 NA 5' UTR (NM_028906, exon 1 of 21) 5' UTR (NM_028906, exon 1 of 21) 161 NM_028906 74388 Mm.202749 NM_028906 ENSMUSG00000032393 Dpp8 2310004I03Rik|4932434F09Rik|AI666706|DPP VIII dipeptidylpeptidase 8 protein-coding common_peak2_121_1047_-0.142291239304122_9.96227738188539_1.32453653199543 chr2 58136969 58139341 + 1.32453653199543 NA intron (NM_139200, intron 6 of 7) intron (NM_139200, intron 6 of 7) 21967 NM_139200 227929 Mm.273905 NM_139200 ENSMUSG00000026832 Cytip A130053M09Rik|AI462064|C80816|Cbp|Cybr|Pscdbp cytohesin 1 interacting protein protein-coding common_peak2_417_4102_0.0678944888185633_12.0364106833018_1.32448017616505 chr2 154656190 154660147 + 1.32448017616505 NA intron (NM_029362, intron 1 of 4) intron (NM_029362, intron 1 of 4) 1142 NM_029362 75608 Mm.262480 NM_029362 ENSMUSG00000038467 Chmp4b 2010012F05Rik|C76846|Snf7-2 charged multivesicular body protein 4B protein-coding common_peak2_76_471_0.194078491411226_8.97968229506745_1.32441487156 chr10 127670706 127673014 + 1.32441487156 NA Intergenic Intergenic 4737 NR_045171 72243 Mm.482902 NR_045171 ENSMUSG00000040195 1700012D01Rik - RIKEN cDNA 1700012D01 gene ncRNA common_peak2_58_453_-0.221022082249089_8.71603744616637_1.32435318388989 chr3 154187647 154189953 + 1.32435318388989 NA intron (NM_001081263, intron 2 of 21) intron (NM_001081263, intron 2 of 21) 141760 NM_010713 16875 Mm.15530 NM_010713 ENSMUSG00000096225 Lhx8 L3|Lhx7 LIM homeobox protein 8 protein-coding common_peak1_58_453_-0.221022082249089_8.71603744616637_1.32435318388989 chr17 37271061 37271789 + 1.32435318388989 NA intron (NM_013819, intron 3 of 7) intron (NM_013819, intron 3 of 7) 1191 NM_013819 14991 Mm.14437 NM_013819 ENSMUSG00000016206 H2-M3 H-2M3|Hmt|M3a|MuprM3|MuprM301|MuprM302|R4B2 histocompatibility 2, M region locus 3 protein-coding common_peak1_53_294_0.244248733776747_8.32669551113758_1.32385076725706 chr5 118464343 118465274 + 1.32385076725706 NA Intergenic B1F|SINE|Alu -95911 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak2_53_294_0.244248733776747_8.32669551113758_1.32385076725706 chr7 117380317 117381871 + 1.32385076725706 NA 5' UTR (NM_175645, exon 1 of 12) 5' UTR (NM_175645, exon 1 of 12) 115 NM_175645 233781 Mm.461427 NM_175645 ENSMUSG00000030657 Xylt1 8030490L12 xylosyltransferase 1 protein-coding common_peak2_47_251_0.263107855778535_8.10883385138918_1.32382085114742 chr13 101756379 101757798 + 1.32382085114742 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) 11129 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_47_251_0.263107855778535_8.10883385138918_1.32382085114742 chr19 46470796 46471812 + 1.32382085114742 NA intron (NM_015752, intron 8 of 11) intron (NM_015752, intron 8 of 11) -30344 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_271_2696_-0.0871543005160085_11.3535626559776_1.32362120659552 chr16 38398098 38401219 + 1.32362120659552 NA intron (NM_134102, intron 9 of 10) intron (NM_134102, intron 9 of 10) 33487 NM_134102 85031 Mm.279805 NM_134102 ENSMUSG00000002847 Pla1a AA986889|Ps-pla1|Pspla1 phospholipase A1 member A protein-coding common_peak2_27_120_0.367701512743331_7.10271399364626_1.32358901793376 chr2 58107846 58108449 + 1.32358901793376 NA Intergenic Intergenic 51975 NM_139200 227929 Mm.273905 NM_139200 ENSMUSG00000026832 Cytip A130053M09Rik|AI462064|C80816|Cbp|Cybr|Pscdbp cytohesin 1 interacting protein protein-coding unique_peak2_27_120_0.367701512743331_7.10271399364626_1.32358901793376 chrX 50581514 50582697 + 1.32358901793376 NA intron (NR_015505, intron 13 of 19) intron (NR_015505, intron 13 of 19) 44716 NR_131207 102639259 Mm.350898 NR_131207 Gm35612 - predicted gene, 35612 ncRNA common_peak2_55_426_-0.224915198416209_8.62563466041239_1.32354286358231 chr18 37954199 37955721 + 1.32354286358231 NA promoter-TSS (NM_153793) promoter-TSS (NM_153793) 28 NM_010411 15183 Mm.20521 NM_010411 ENSMUSG00000024454 Hdac3 AW537363 histone deacetylase 3 protein-coding common_peak2_31_228_-0.31633821378542_7.68103468120423_1.32335975343092 chr1 171660763 171662310 + 1.32335975343092 NA Intergenic MLT1A0|LTR|ERVL-MaLR -8499 NM_144539 75345 Mm.164642 NM_144539 ENSMUSG00000038179 Slamf7 19A|19A24|4930560D03Rik|CRACC|CS1 SLAM family member 7 protein-coding common_peak1_31_228_-0.31633821378542_7.68103468120423_1.32335975343092 chr13 90930660 90931362 + 1.32335975343092 NA Intergenic Lx5c|LINE|L1 7889 NM_024175 66475 Mm.306302 NM_024175 ENSMUSG00000049517 Rps23 2410044J15Rik ribosomal protein S23 protein-coding common_peak1_31_228_-0.31633821378542_7.68103468120423_1.32335975343092-2 chr14 122201340 122201860 + 1.32335975343092 NA intron (NM_029556, intron 1 of 7) B1_Mus2|SINE|Alu 19906 NM_029556 69634 Mm.34608 NM_029556 ENSMUSG00000025545 Clybl 0610033J05Rik|2310014M14Rik|AI256068|Clb citrate lyase beta like protein-coding common_peak2_82_669_-0.178511416176788_9.29876157725674_1.32265352593002 chr10 42678662 42680236 + 1.32265352593002 NA intron (NM_172416, intron 1 of 5) intron (NM_172416, intron 1 of 5) 533 NM_172416 14628 Mm.46636 NM_172416 ENSMUSG00000038280 Ostm1 1200002H13Rik|HSPC019|gl osteopetrosis associated transmembrane protein 1 protein-coding common_peak2_52_400_-0.231716661011808_8.53160009594902_1.32220443761877 chr11 70409405 70410563 + 1.32220443761877 NA promoter-TSS (NM_029231) promoter-TSS (NM_029231) 47 NM_029231 75273 Mm.340601 NM_029231 ENSMUSG00000018921 Pelp1 4930563C04Rik|MNAR proline, glutamic acid and leucine rich protein 1 protein-coding common_peak1_52_400_-0.231716661011808_8.53160009594902_1.32220443761877 chr13 23445319 23446189 + 1.32220443761877 NA Intergenic CpG -14737 NR_015492 320842 Mm.487476 NR_015492 ENSMUSG00000085024 C230035I16Rik - RIKEN cDNA C230035I16 gene ncRNA common_peak1_87_561_0.178596044845737_9.22372434264379_1.32212748607396 chr11 106500824 106501613 + 1.32212748607396 NA TTS (NR_030703) TTS (NR_030703) 227 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA common_peak2_87_561_0.178596044845737_9.22372434264379_1.32212748607396 chr6 108476465 108478376 + 1.32212748607396 NA intron (NM_010585, intron 46 of 61) intron (NM_010585, intron 46 of 61) -12323 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_101_849_-0.157035942711252_9.65280105966944_1.32175457286967 chr15 41831425 41833019 + 1.32175457286967 NA intron (NM_001130164, intron 1 of 5) intron (NM_001130164, intron 1 of 5) 1264 NM_001130164 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_111_947_-0.148953876507621_9.81426631064445_1.32141486007973 chr2 150134905 150137306 + 1.32141486007973 NA intron (NM_181266, intron 1 of 3) intron (NM_181266, intron 1 of 3) 573 NM_023266 104348 Mm.485851 NM_023266 ENSMUSG00000068134 Zfp120 AI315103|E030042N05Rik|F80|MZF31|Zfp844 zinc finger protein 120 protein-coding common_peak2_265_2320_0.0899818165042348_11.2255217155966_1.32119946863672 chr14 120476828 120480119 + 1.32119946863672 NA promoter-TSS (NM_029519) promoter-TSS (NM_029519) 12 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding common_peak2_71_431_0.203022482081911_8.85639874320442_1.32117268047563 chr15 66851058 66853206 + 1.32117268047563 NA Intergenic Intergenic -20303 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_71_431_0.203022482081911_8.85639874320442_1.32117268047563-3 chr4 141453804 141455426 + 1.32117268047563 NA intron (NM_009541, intron 2 of 15) intron (NM_009541, intron 2 of 15) 9942 NM_009541 22642 Mm.389590 NM_009541 ENSMUSG00000006215 Zbtb17 AA589413|Lp-1|Miz1|Zfp100|mZ13 zinc finger and BTB domain containing 17 protein-coding common_peak2_71_431_0.203022482081911_8.85639874320442_1.32117268047563-2 chr2 65336655 65338519 + 1.32117268047563 NA intron (NM_177074, intron 7 of 11) intron (NM_177074, intron 7 of 11) 26439 NM_177074 320106 Mm.227703 NM_177074 ENSMUSG00000061171 Slc38a11 9330158F14Rik solute carrier family 38, member 11 protein-coding unique_peak2_35_259_-0.291070139969431_7.87683274304374_1.32115210962845 chr1 37480478 37482204 + 1.32115210962845 NA intron (NM_001290801, intron 4 of 14) intron (NM_001290801, intron 4 of 14) 7264 NR_024017 77633 Mm.483177 NR_024017 ENSMUSG00000103948 4930594C11Rik - G1 to S phase transition pseudogene pseudo common_peak2_49_375_-0.241961348354897_8.43360817750019_1.32023495776531 chr9 56548785 56550845 + 1.32023495776531 NA Intergenic MLT1G|LTR|ERVL-MaLR 85833 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding unique_peak2_25_182_-0.360278593643111_7.33556054146249_1.31973223911114 chr3 108795300 108796367 + 1.31973223911114 NA intron (NM_011504, intron 17 of 18) B1_Mus2|SINE|Alu 44669 NM_011504 20912 Mm.316894 NM_011504 ENSMUSG00000027882 Stxbp3 Munc-18c|Stxbp3a|Sxtbp3|Unc18-3 syntaxin binding protein 3 protein-coding unique_peak2_25_182_-0.360278593643111_7.33556054146249_1.31973223911114-2 chr4 106787089 106788541 + 1.31973223911114 NA intron (NM_025590, intron 1 of 15) intron (NM_025590, intron 1 of 15) 12016 NM_025590 329910 Mm.222956 NM_025590 ENSMUSG00000034853 Acot11 1110020M10Rik|2010309H15Rik|AW060409|BFIT|BFIT1|Thea|Them1|mKIAA0707 acyl-CoA thioesterase 11 protein-coding common_peak1_32_151_0.329392434217294_7.41262373055223_1.31925242713198 chr16 49796278 49796973 + 1.31925242713198 NA Intergenic Intergenic -59029 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_139_1229_-0.129772263330356_10.1995564685614_1.31881304122513 chr6 85915081 85916474 + 1.31881304122513 NA promoter-TSS (NM_001170488) promoter-TSS (NM_001170488) 58 NM_001170488 69786 Mm.218434 NM_176842 ENSMUSG00000054226 Tprkb 0610033G21Rik|1810034M08Rik|Cgi-121|DRWMS1|mDRWMS1 Tp53rk binding protein protein-coding common_peak1_257_2233_0.0910605271102742_11.1709437340385_1.31840029869497 chr6 99094609 99096979 + 1.31840029869497 NA intron (NM_053202, intron 4 of 18) intron (NM_053202, intron 4 of 18) -67496 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_217_2072_-0.0991498543934224_10.9679294739127_1.3183574188604 chr5 32458105 32460617 + 1.3183574188604 NA exon (NM_172707, exon 1 of 8) exon (NM_172707, exon 1 of 8) 391 NM_172707 19046 Mm.241931 NM_172707 ENSMUSG00000014956 Ppp1cb 1200010B19 protein phosphatase 1, catalytic subunit, beta isoform protein-coding common_peak2_86_706_-0.172768574143547_9.37918211773763_1.31829209050942 chrX 20703615 20705305 + 1.31829209050942 NA intron (NM_145628, intron 1 of 20) CpG 551 NM_145628 236733 Mm.34489 NM_145628 ENSMUSG00000031066 Usp11 6230415D12Rik|mKIAA4085 ubiquitin specific peptidase 11 protein-coding common_peak1_121_858_0.144617441094866_9.8188230416859_1.31802569480246 chr15 85810748 85812159 + 1.31802569480246 NA intron (NM_197998, intron 1 of 4) CpG 244 NM_001164626 72355 Mm.33706 NM_197998 ENSMUSG00000064284 Cdpf1 2210021J22Rik cysteine rich, DPF motif domain containing 1 protein-coding common_peak2_91_595_0.172516906004061_9.30542697346419_1.31780954526541 chr5 29434458 29435769 + 1.31780954526541 NA exon (NM_001033457, exon 1 of 11) exon (NM_001033457, exon 1 of 11) 446 NM_001033457 433864 Mm.262815 NM_001033457 ENSMUSG00000001569 Nom1 D5Kng1|Gm1040 nucleolar protein with MIF4G domain 1 protein-coding common_peak2_199_1871_-0.104512593887952_10.8181084226394_1.31724845277523 chr7 28817363 28822503 + 1.31724845277523 NA intron (NM_177301, intron 8 of 12) intron (NM_177301, intron 8 of 12) -5405 NM_016772 51798 Mm.291776 NM_016772 ENSMUSG00000053898 Ech1 AA617331 enoyl coenzyme A hydratase 1, peroxisomal protein-coding common_peak2_152_1148_0.125642210634627_10.2289841879634_1.31712447335803 chr10 99267269 99269797 + 1.31712447335803 NA Intergenic Intergenic 5302 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_152_1148_0.125642210634627_10.2289841879634_1.31712447335803 chr19 3324560 3326149 + 1.31712447335803 NA intron (NM_013495, intron 1 of 18) CpG 2053 NM_013495 12894 Mm.18522 NM_013495 ENSMUSG00000024900 Cpt1a C730027G07|CPTI|Cpt1 carnitine palmitoyltransferase 1a, liver protein-coding common_peak1_77_623_-0.185846458068031_9.19247898982823_1.316294194225 chrX 7573676 7574577 + 1.316294194225 NA exon (NM_138605, exon 1 of 4) exon (NM_138605, exon 1 of 4) 155 NM_001290574 54646 Mm.148163 NM_138605 ENSMUSG00000039556 Ppp1r3f DXImx48e|R3F|RF3|Sfc15 protein phosphatase 1, regulatory (inhibitor) subunit 3F protein-coding common_peak2_358_3753_-0.0731198355833591_11.8376530170392_1.31628139218593 chr15 81520996 81524394 + 1.31628139218593 NA Intergenic B1F|SINE|Alu 56379 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding unique_peak2_10_74_-0.595633258988284_5.93100206100174_1.31610797477367 chr2 69635122 69635747 + 1.31610797477367 NA Intergenic B3|SINE|B2 -11821 NM_028284 72569 Mm.252136 NM_028284 ENSMUSG00000063145 Bbs5 1700049I01Rik|2700023J09Rik Bardet-Biedl syndrome 5 (human) protein-coding common_peak1_88_725_-0.170807369231563_9.41842205337997_1.31601775475863-2 chr8 25066956 25068187 + 1.31601775475863 NA intron (NM_031257, intron 3 of 11) intron (NM_031257, intron 3 of 11) -28609 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding common_peak1_88_725_-0.170807369231563_9.41842205337997_1.31601775475863 chr5 38864945 38865958 + 1.31601775475863 NA intron (NM_013748, intron 1 of 18) intron (NM_013748, intron 1 of 18) 11242 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak2_252_2178_0.0923917361054549_11.1356463491686_1.31554027332737 chr7 138844903 138847377 + 1.31554027332737 NA promoter-TSS (NM_026391) promoter-TSS (NM_026391) 127 NM_001045483 69546 Mm.31598 NM_027115 ENSMUSG00000041775 Mapk1ip1 2310009E07Rik|AU043776|MISS mitogen-activated protein kinase 1 interacting protein 1 protein-coding common_peak1_26_114_0.37671751589522_7.03384880889199_1.31546404827132 chr15 66860553 66861177 + 1.31546404827132 NA Intergenic Intergenic -29036 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_26_114_0.37671751589522_7.03384880889199_1.31546404827132-3 chr5 113622423 113622872 + 1.31546404827132 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 27743 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak2_26_114_0.37671751589522_7.03384880889199_1.31546404827132 chr19 21603618 21604471 + 1.31546404827132 NA intron (NM_025423, intron 2 of 3) intron (NM_025423, intron 2 of 3) 48747 NM_025423 66206 Mm.272430 NM_025423 ENSMUSG00000035171 1110059E24Rik - RIKEN cDNA 1110059E24 gene protein-coding common_peak1_26_114_0.37671751589522_7.03384880889199_1.31546404827132-2 chr19 11379576 11380212 + 1.31546404827132 NA intron (NM_001310331, intron 2 of 6) MTC|LTR|ERVL-MaLR 4406 NM_001310331 666907 NM_001310331 ENSMUSG00000101389 Ms4a4a EG666907 membrane-spanning 4-domains, subfamily A, member 4A protein-coding common_peak2_132_959_0.137009717053843_9.97539545413544_1.31538644070895 chr11 108267030 108270201 + 1.31538644070895 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 75273 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding unique_peak2_24_174_-0.365195919695945_7.26861315198436_1.31506430239551 chrX 105925774 105927305 + 1.31506430239551 NA intron (NM_009530, intron 1 of 34) ORR1C2|LTR|ERVL-MaLR 2833 NM_009530 22589 Mm.10141 NM_009530 ENSMUSG00000031229 Atrx 4833408C14Rik|AI447451|ATR2|DXHXS6677E|HP1-BP38|Hp1bp2|Hp1bp38|MRXS3|RAD54L|Rad54|XH2|Xnp|ZNF-HX alpha thalassemia/mental retardation syndrome X-linked protein-coding common_peak1_24_174_-0.365195919695945_7.26861315198436_1.31506430239551 chr8 61450590 61451102 + 1.31506430239551 NA Intergenic Intergenic -36888 NM_145595 234309 Mm.29059 NM_145595 ENSMUSG00000031641 Cbr4 A730083J17Rik|BC009118 carbonyl reductase 4 protein-coding common_peak2_57_443_-0.21914024065118_8.68484574602451_1.31499043359146 chr11 61761263 61762278 + 1.31499043359146 NA intron (NM_001164243, intron 1 of 10) intron (NM_001164243, intron 1 of 10) 318 NM_144806 212627 Mm.27703 NM_144806 ENSMUSG00000020528 Prpsap2 A230054F23Rik phosphoribosyl pyrophosphate synthetase-associated protein 2 protein-coding common_peak1_181_1433_0.113128045204499_10.5423933313042_1.3145510041977 chr12 32207824 32210288 + 1.3145510041977 NA promoter-TSS (NM_020272) promoter-TSS (NM_020272) -407 NM_001146200 30955 Mm.101369 NM_020272 ENSMUSG00000020573 Pik3cg 5830428L06Rik|PI3Kgamma|p110gamma phosphoinositide-3-kinase, catalytic, gamma polypeptide protein-coding common_peak1_36_177_0.304050220245013_7.6277585410889_1.31436501623285 chr1 121567347 121567975 + 1.31436501623285 NA intron (NM_025860, intron 1 of 12) CpG 319 NM_025860 66942 Mm.44219 NM_025860 ENSMUSG00000001674 Ddx18 2310005B10Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein-coding unique_peak2_30_220_-0.321220354657125_7.62729238206287_1.31436501623285 chr19 36083086 36084400 + 1.31436501623285 NA promoter-TSS (NM_019428) promoter-TSS (NM_019428) 27 NM_019428 54364 Mm.277891 NM_019428 ENSMUSG00000024800 Rpp30 Rnasep2|TSG15 ribonuclease P/MRP 30 subunit protein-coding common_peak1_30_220_-0.321220354657125_7.62729238206287_1.31436501623285 chr6 128855933 128856487 + 1.31436501623285 NA intron (NM_001254946, intron 2 of 2) intron (NM_001254946, intron 2 of 2) -29895 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak1_36_177_0.304050220245013_7.6277585410889_1.31436501623285-2 chr11 22871333 22872072 + 1.31436501623285 NA Intergenic Intergenic -11366 NM_001169114 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak2_130_940_0.139036349118337_9.9475690872877_1.31419647817365 chr11 117989398 117993239 + 1.31419647817365 NA intron (NM_133757, intron 1 of 9) ID_B1|SINE|B4 4461 NM_133757 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak2_120_1036_-0.141633334177778_9.94738351172434_1.31419647817325 chr7 125629616 125632237 + 1.31419647817325 NA intron (NM_021887, intron 8 of 8) intron (NM_021887, intron 8 of 8) 27497 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak2_101_680_0.162772100301741_9.49289703816294_1.31412707126358-2 chr2 93848989 93850953 + 1.31412707126358 NA promoter-TSS (NM_183220) promoter-TSS (NM_183220) -28 NM_001290782 329470 Mm.486910 NM_183220 ENSMUSG00000040272 Accs 2610203E10Rik|Phacs 1-aminocyclopropane-1-carboxylate synthase (non-functional) protein-coding common_peak2_101_680_0.162772100301741_9.49289703816294_1.31412707126358 chr19 47132048 47134425 + 1.31412707126358 NA intron (NM_133746, intron 2 of 2) intron (NM_133746, intron 2 of 2) 5058 NM_133746 72691 Mm.31663 NM_133746 ENSMUSG00000033033 Calhm2 2810048G17Rik|Fam26b calcium homeostasis modulator 2 protein-coding common_peak1_364_3460_0.0734513870985012_11.7936989197147_1.31392392591906 chr9 69451687 69455506 + 1.31392392591906 NA promoter-TSS (NM_007585) promoter-TSS (NM_007585) -87 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding common_peak1_79_641_-0.182070637118814_9.23539416856289_1.31365672871248 chr2 105016350 105017447 + 1.31365672871248 NA intron (NM_145380, intron 1 of 10) CpG 129 NM_145380 98221 Mm.379278 NM_145380 ENSMUSG00000027170 Eif3m Ga17|Pcid1|Tango7 eukaryotic translation initiation factor 3, subunit M protein-coding common_peak1_590_6827_-0.0540062102491543_12.7102442379032_1.31360008840633 chr5 64483692 64490954 + 1.31360008840633 NA Intergenic Intergenic 10315 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA common_peak2_118_1016_-0.143031593617856_9.91858816704857_1.31318295024345 chr14 64665235 64669127 + 1.31318295024345 NA intron (NM_001081177, intron 1 of 39) intron (NM_001081177, intron 1 of 39) 14650 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak1_288_2897_-0.0835733759883297_11.4590551915628_1.3130325344501 chr6 85960509 85962502 + 1.3130325344501 NA exon (NM_028099, exon 1 of 9) exon (NM_028099, exon 1 of 9) 162 NM_028099 72102 Mm.24007 NM_028099 ENSMUSG00000030002 Dusp11 2010300F21Rik|AI481497 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) protein-coding common_peak1_68_408_0.206638287305045_8.77927617659427_1.31264458377942 chr9 56424485 56425538 + 1.31264458377942 NA intron (NM_025812, intron 1 of 9) B4A|SINE|B4 6165 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_55_309_0.237052655930043_8.39465073323926_1.31254247726912-2 chr9 45300641 45301630 + 1.31254247726912 NA Intergenic Intergenic -17965 NM_001013373 214531 Mm.394987 NM_001013373 ENSMUSG00000037129 Tmprss13 BC010843|Tpmrss13 transmembrane protease, serine 13 protein-coding common_peak1_55_309_0.237052655930043_8.39465073323926_1.31254247726912 chr10 77533102 77534099 + 1.31254247726912 NA intron (NM_008404, intron 1 of 15) intron (NM_008404, intron 1 of 15) 3252 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding unique_peak2_11_80_-0.552686845978885_6.06350657989518_1.31216754501451 chr11 4232177 4232806 + 1.31216754501451 NA Intergenic Intergenic -4294 NM_001013365 18413 Mm.131422 NM_001013365 ENSMUSG00000058755 Osm OncoM oncostatin M protein-coding unique_peak2_11_80_-0.552686845978885_6.06350657989518_1.31216754501451-3 chr9 14187783 14188476 + 1.31216754501451 NA Intergenic Intergenic -88172 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak1_11_80_-0.552686845978885_6.06350657989518_1.31216754501451 chr6 134946949 134947301 + 1.31216754501451 NA intron (NR_037956, intron 1 of 1) ID_B1|SINE|B4 18033 NR_037955 381822 Mm.5935 NR_037955 ENSMUSG00000098318 Lockd 1190002F15Rik|AI120476|Droc lncRNA downstream of Cdkn1b ncRNA unique_peak2_11_80_-0.552686845978885_6.06350657989518_1.31216754501451-2 chr3 88490526 88491382 + 1.31216754501451 NA intron (NM_001002011, intron 1 of 11) intron (NM_001002011, intron 1 of 11) 2358 NM_019390 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_54_417_-0.226068113694968_8.5943250752334_1.31203114713635 chr14 46787676 46788373 + 1.31203114713635 NA intron (NM_009919, intron 1 of 4) CpG 333 NM_009919 12793 Mm.3261 NM_009919 ENSMUSG00000015759 Cnih1 0610007J15|CNIH-1|Cnih cornichon family AMPA receptor auxiliary protein 1 protein-coding common_peak2_114_976_-0.145648360996555_9.85939057147011_1.31172965072941 chr3 144380001 144382512 + 1.31172965072941 NA Intergenic Intergenic -176001 NM_010723 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_94_782_-0.164398707015829_9.53066914378313_1.31163864314291 chr3 99140669 99141787 + 1.31163864314291 NA intron (NM_027462, intron 1 of 5) CpG 138 NM_027462 70560 Mm.316754 NM_027462 ENSMUSG00000004233 Wars2 5730427B17Rik|9430020O07Rik|AI413375|TrpRS tryptophanyl tRNA synthetase 2 (mitochondrial) protein-coding common_peak1_23_166_-0.369928824381957_7.19873988028307_1.31139924623257 chr16 10773903 10774447 + 1.31139924623257 NA Intergenic Intergenic 11361 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding unique_peak2_23_166_-0.369928824381957_7.19873988028307_1.31139924623257 chr16 91684976 91686145 + 1.31139924623257 NA intron (NM_021720, intron 3 of 9) intron (NM_021720, intron 3 of 9) 3168 NM_021720 60364 Mm.328698 NM_021720 ENSMUSG00000022960 Donson 1110025J21Rik|AI845729|ORF60 downstream neighbor of SON protein-coding unique_peak2_23_166_-0.369928824381957_7.19873988028307_1.31139924623257-3 chr5 65872677 65874067 + 1.31139924623257 NA intron (NM_001081105, intron 1 of 2) intron (NM_001081105, intron 1 of 2) 9803 NM_001081105 74734 Mm.20323 NM_001081105 ENSMUSG00000029204 Rhoh 5830400A04Rik|AU019774|Arhh ras homolog family member H protein-coding unique_peak2_23_166_-0.369928824381957_7.19873988028307_1.31139924623257-2 chr19 5731116 5732374 + 1.31139924623257 NA promoter-TSS (NM_020491) promoter-TSS (NM_020491) -13 NM_020491 56390 Mm.455818 NM_020491 ENSMUSG00000079478 Sssca1 1500016H19Rik|C184L Sjogren's syndrome/scleroderma autoantigen 1 homolog (human) protein-coding common_peak1_43_224_0.27262886266327_7.95009562254867_1.31129431001513 chr10 117898356 117899085 + 1.31129431001513 NA Intergenic RLTR14|LTR|ERV1 -26739 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_43_224_0.27262886266327_7.95009562254867_1.31129431001513-2 chr9 77544321 77545216 + 1.31129431001513 NA promoter-TSS (NM_001146048) promoter-TSS (NM_001146048) 84 NM_001146048 214345 Mm.28534 NM_172528 ENSMUSG00000032352 Lrrc1 A430093J20Rik|AU016091|D030059I21|mKIAA4018 leucine rich repeat containing 1 protein-coding common_peak1_38_283_-0.276803669896821_8.01134528455627_1.31099886172161 chr2 26493450 26494254 + 1.31099886172161 NA intron (NM_008714, intron 2 of 33) intron (NM_008714, intron 2 of 33) 9970 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding unique_peak2_38_283_-0.276803669896821_8.01134528455627_1.31099886172161 chr5 75779617 75781558 + 1.31099886172161 NA Intergenic Intergenic 197841 NM_010612 16542 Mm.285 NM_010612 ENSMUSG00000062960 Kdr 6130401C07|Flk-1|Flk1|Krd-1|Ly73|VEGFR-2|VEGFR2|sVEGFR-2 kinase insert domain protein receptor protein-coding common_peak1_96_801_-0.162120063091511_9.56639839490916_1.31089418361218 chr19 29647582 29648595 + 1.31089418361218 NA exon (NM_001081213, exon 1 of 15) exon (NM_001081213, exon 1 of 15) 332 NM_001081213 226090 Mm.267131 NM_146098 ENSMUSG00000046324 Ermp1 D19Ertd410e|D19Wsu12e|Fxna|mKIAA1815 endoplasmic reticulum metallopeptidase 1 protein-coding common_peak1_163_1480_-0.117688037850709_10.4735119063635_1.31071534357403 chr5 34186566 34187797 + 1.31071534357403 NA intron (NM_010753, intron 2 of 5) CpG 529 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding unique_peak2_34_251_-0.295834208976383_7.82936281901173_1.3103853716272 chr4 45017918 45019237 + 1.3103853716272 NA promoter-TSS (NM_001285800) promoter-TSS (NM_001285800) -32 NM_022811 64424 Mm.282932 NM_022811 ENSMUSG00000028318 Polr1e 53kDa|AU042259|D030019D19Rik|Paf53|Praf1 polymerase (RNA) I polypeptide E protein-coding common_peak2_34_251_-0.295834208976383_7.82936281901173_1.3103853716272 chr6 49972902 49974063 + 1.3103853716272 NA Intergenic Intergenic -136759 NM_019939 56524 Mm.41288 NM_008016 ENSMUSG00000038388 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) protein-coding common_peak2_126_904_0.140436712203478_9.89199233807231_1.31022813522766 chr12 100109719 100111313 + 1.31022813522766 NA Intergenic CpG -1815 NM_008947 19179 Mm.157105 NM_008947 ENSMUSG00000021178 Psmc1 AI325227|P26s4|Rpt2/S4|S4|rpt2 protease (prosome, macropain) 26S subunit, ATPase 1 protein-coding common_peak1_67_532_-0.201230839412293_8.95737630305303_1.30993596541564 chr5 88564816 88565729 + 1.30993596541564 NA exon (NM_001289775, exon 1 of 13) exon (NM_001289775, exon 1 of 13) 232 NM_001289775 52822 Mm.270469 NM_027530 ENSMUSG00000029291 Rufy3 2810428M05Rik|6330416M07Rik|AW455998|AW538594|D5Bwg0860e|Ripx|Rpipx RUN and FYVE domain containing 3 protein-coding common_peak2_67_532_-0.201230839412293_8.95737630305303_1.30993596541564-2 chr17 15526638 15528187 + 1.30993596541564 NA promoter-TSS (NM_008799) promoter-TSS (NM_008799) -111 NM_008799 18567 Mm.323 NM_008799 ENSMUSG00000014771 Pdcd2 AI528543|Pcd2|RP-8 programmed cell death 2 protein-coding common_peak2_67_532_-0.201230839412293_8.95737630305303_1.30993596541564 chr11 96776724 96778484 + 1.30993596541564 NA promoter-TSS (NM_001163389) promoter-TSS (NM_001163389) -49 NM_001163389 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding common_peak2_86_553_0.179055664616664_9.20326999835752_1.30940197029151 chr12 40426734 40428823 + 1.30940197029151 NA intron (NM_172575, intron 1 of 12) intron (NM_172575, intron 1 of 12) 18012 NM_172575 246196 Mm.26852 NM_172575 ENSMUSG00000055917 Zfp277 2410017E24Rik|NIRF4 zinc finger protein 277 protein-coding common_peak2_147_1311_-0.12454373103396_10.2952801391011_1.30882038870003 chr7 80773860 80777059 + 1.30882038870003 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 27872 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_203_1915_-0.102986446236011_10.8523886226182_1.30866534602358 chr19 6140123 6141939 + 1.30866534602358 NA intron (NM_019722, intron 1 of 4) CpG 106 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding common_peak2_127_1106_-0.136349310097316_10.0442648517329_1.30862083697122 chr17 32787157 32788908 + 1.30862083697122 NA intron (NM_172458, intron 1 of 3) CpG 255 NM_172458 208292 Mm.38813 NM_172458 ENSMUSG00000024298 Zfp871 4732483N19|9030612M13Rik|AI118577|AI265322|mKIAA3006 zinc finger protein 871 protein-coding common_peak1_74_595_-0.189018812172495_9.12465911437591_1.30860666471407 chr9 18291924 18292920 + 1.30860666471407 NA exon (NM_025844, exon 1 of 11) exon (NM_025844, exon 1 of 11) 155 NM_025844 66917 Mm.103534 NM_025844 ENSMUSG00000001774 Chordc1 1110001O09Rik|AA409036|Chp-1|morgana cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 protein-coding common_peak1_51_392_-0.236351946431318_8.50020952904295_1.30827840652815 chr6 128823294 128824228 + 1.30827840652815 NA intron (NM_030599, intron 1 of 5) L2a|LINE|L2 2554 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak1_49_266_0.251931571635186_8.18666171750515_1.30778424870121-3 chr19 46619222 46620071 + 1.30778424870121 NA intron (NM_001177812, intron 2 of 4) intron (NM_001177812, intron 2 of 4) -3755 NM_001177813 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_49_266_0.251931571635186_8.18666171750515_1.30778424870121-2 chr19 4257671 4258395 + 1.30778424870121 NA Intergenic Intergenic 5845 NR_105951 102465595 NR_105951 ENSMUSG00000099290 Mir6985 Gm27719|mmu-mir-6985 microRNA 6985 ncRNA common_peak1_49_266_0.251931571635186_8.18666171750515_1.30778424870121 chr17 71310262 71311273 + 1.30778424870121 NA exon (NM_145158, exon 1 of 8) exon (NM_145158, exon 1 of 8) 198 NM_145158 246707 Mm.23462 NM_145158 ENSMUSG00000024053 Emilin2 FOAP-10 elastin microfibril interfacer 2 protein-coding common_peak2_154_1385_-0.121923750524587_10.3757496668749_1.30751693234787 chr7 30193501 30195343 + 1.30751693234787 NA intron (NM_009795, intron 1 of 10) PB1D10|SINE|Alu 626 NM_009795 12336 Mm.439782 NM_009795 ENSMUSG00000001794 Capns1 Capa-4|Capa4|Capn4|D7Ertd146e calpain, small subunit 1 protein-coding unique_peak2_31_145_0.333041015431506_7.35634506659577_1.30728790139829 chr11 83617619 83619030 + 1.30728790139829 NA intron (NR_036452, intron 5 of 8) L1M4|LINE|L1 -25237 NM_009139 20305 Mm.137 NM_009139 ENSMUSG00000018927 Ccl6 MRP-1|Scya6|c10 chemokine (C-C motif) ligand 6 protein-coding common_peak1_31_145_0.333041015431506_7.35634506659577_1.30728790139829-2 chr7 125510876 125511476 + 1.30728790139829 NA Intergenic MLT2B1|LTR|ERVL -19634 NM_026330 67711 Mm.4467 NM_026330 ENSMUSG00000030750 Nsmce1 2510027N19Rik NSE1 homolog, SMC5-SMC6 complex component protein-coding common_peak1_31_145_0.333041015431506_7.35634506659577_1.30728790139829 chr3 131208070 131208700 + 1.30728790139829 NA intron (NM_001276403, intron 11 of 11) intron (NM_001276403, intron 11 of 11) 63716 NM_008212 15107 Mm.260164 NM_008212 ENSMUSG00000027984 Hadh AA409008|AU019341|AW742602|HCDH|Hadhsc|Schad hydroxyacyl-Coenzyme A dehydrogenase protein-coding common_peak2_329_3393_-0.0767330038171057_11.6904043476341_1.30706707236061 chr1 171501730 171505024 + 1.30706707236061 NA promoter-TSS (NM_019484) promoter-TSS (NM_019484) -101 NM_019484 56009 Mm.389208 NM_019484 ENSMUSG00000060244 Alyref2 C130042O11Rik|REF2|Refbp2 Aly/REF export factor 2 protein-coding common_peak1_70_424_0.201840514821953_8.83223928843604_1.30675145483282 chr5 138441450 138442222 + 1.30675145483282 NA intron (NM_028130, intron 1 of 4) CpG 360 NM_028130 72154 Mm.20263 NM_028130 ENSMUSG00000036898 Zfp157 2610020C11Rik|A630094N24Rik|AI327407|mszf12|mszf23-1 zinc finger protein 157 protein-coding common_peak1_77_480_0.189662677024176_9.00472442228213_1.30648594673939 chr15 76246787 76247743 + 1.30648594673939 NA promoter-TSS (NR_105918) promoter-TSS (NR_105918) 458 NM_023168 66168 Mm.41665 NM_023168 ENSMUSG00000022564 Grina 1110025J15Rik|Lag|Tmbim3 glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) protein-coding common_peak2_69_549_-0.195229782702132_9.00567291706096_1.3064859467392 chr2 128071869 128074368 + 1.3064859467392 NA intron (NM_028765, intron 14 of 17) intron (NM_028765, intron 14 of 17) -52920 NM_207681 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_158_1206_0.122666320841375_10.2985431211757_1.30641941521272 chr1 121326874 121328856 + 1.30641941521272 NA promoter-TSS (NM_001271531) promoter-TSS (NM_001271531) 159 NM_001271532 72999 Mm.27136 NM_133748 ENSMUSG00000003721 Insig2 2900053I11Rik|C730043J18Rik|Insig-2 insulin induced gene 2 protein-coding common_peak2_158_1206_0.122666320841375_10.2985431211757_1.30641941521272-2 chr13 58214448 58216513 + 1.30641941521272 NA 5' UTR (NM_152234, exon 1 of 10) 5' UTR (NM_152234, exon 1 of 10) 173 NM_152234 56085 Mm.182053 NM_026842 ENSMUSG00000005312 Ubqln1 1110046H03Rik|1810030E05Rik|AU019746|C77538|D13Ertd372e|Da41|Dsk2|Plic-1|Plic1|Xdrp1 ubiquilin 1 protein-coding common_peak1_35_170_0.313445158173125_7.57457509397246_1.30580285823393 chr15 76724417 76725074 + 1.30580285823393 NA promoter-TSS (NM_145472) promoter-TSS (NM_145472) -900 NM_176828 223665 Mm.291713 NM_145472 ENSMUSG00000033707 C030006K11Rik 1110033I13Rik RIKEN cDNA C030006K11 gene protein-coding common_peak1_35_170_0.313445158173125_7.57457509397246_1.30580285823393-2 chr16 32867768 32868528 + 1.30580285823393 NA exon (NM_172615, exon 1 of 19) exon (NM_172615, exon 1 of 19) 218 NM_001200038 100502698 Mm.327319 NM_172615 ENSMUSG00000035629 Rubcn 1700021K19Rik|5330403K09|Kiaa0226|Rubicon|mKIAA0226 RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein protein-coding common_peak1_123_1066_-0.139437633717407_9.98962564396572_1.30540973706696 chr11 21172998 21174626 + 1.30540973706696 NA Intergenic Intergenic -65220 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak2_243_2081_0.0939897201202662_11.0707492133595_1.30448739690962 chr19 3850835 3853062 + 1.30448739690962 NA non-coding (NR_073190, exon 1 of 13) non-coding (NR_073190, exon 1 of 13) 175 NR_073190 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak1_131_950_0.137243039173027_9.96192305044708_1.3040366301698 chr1 66815699 66817015 + 1.3040366301698 NA intron (NM_001122738, intron 1 of 14) intron (NM_001122738, intron 1 of 14) 1238 NM_177645 68691 Mm.240912 NM_177645 ENSMUSG00000026004 Kansl1l 1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189 KAT8 regulatory NSL complex subunit 1-like protein-coding common_peak1_217_2071_-0.0984537409705624_10.9675814172013_1.30380763572893 chr13 91807014 91808524 + 1.30380763572893 NA promoter-TSS (NM_145453) promoter-TSS (NM_145453) -73 NM_145453 69085 Mm.52356 NM_145453 ENSMUSG00000021621 Zcchc9 1810019C21Rik zinc finger, CCHC domain containing 9 protein-coding common_peak2_181_1673_-0.11012645864394_10.6540205832284_1.30375683436205 chr14 66218065 66222379 + 1.30375683436205 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -6670 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_156_1187_0.123156513604883_10.2758973776032_1.30340405224071 chr1 36367759 36369322 + 1.30340405224071 NA intron (NM_001310513, intron 1 of 21) intron (NM_001310513, intron 1 of 21) 641 NM_172652 226976 Mm.24734 NM_172652 ENSMUSG00000010453 Kansl3 4632411B12Rik|4932435K23|AI431067|AI647574|C85723|Kiaa1310|mKIAA1310 KAT8 regulatory NSL complex subunit 3 protein-coding common_peak2_119_1026_-0.142339411347779_9.93305076064431_1.30283084696525 chr6 130091810 130094993 + 1.30283084696525 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -26130 NM_001252577 16635 Mm.333431 NM_010649 ENSMUSG00000079852 Klra4 Chok|Klra32|Klra33|Ly-49d|Ly49d|ly49r<129> killer cell lectin-like receptor, subfamily A, member 4 protein-coding common_peak1_78_631_-0.181681657063786_9.21293991964521_1.30260275282189 chr3 90052878 90053685 + 1.30260275282189 NA promoter-TSS (NM_028475) promoter-TSS (NM_028475) 479 NM_027500 99650 Mm.300083 NM_025762 ENSMUSG00000027942 4933434E20Rik 5730552F22Rik|AI462154|NICE-3|NS5ATP4 RIKEN cDNA 4933434E20 gene protein-coding common_peak1_395_4220_-0.0686900277708133_12.0090241000723_1.3025816970695 chr4 135152105 135155549 + 1.3025816970695 NA intron (NM_019732, intron 2 of 5) intron (NM_019732, intron 2 of 5) 33182 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_41_308_-0.26737607291952_8.13777499144462_1.30203790611016 chr6 120567029 120568241 + 1.30203790611016 NA intron (NR_045733, intron 2 of 3) intron (NR_045733, intron 2 of 3) 12839 NR_045733 73505 Mm.416867 NR_045733 1700072O05Rik - RIKEN cDNA 1700072O05 gene ncRNA common_peak1_41_308_-0.26737607291952_8.13777499144462_1.30203790611016 chr17 6998368 6999074 + 1.30203790611016 NA TTS (NM_026611) TTS (NM_026611) 19861 NM_026611 68195 Mm.181237 NM_026611 ENSMUSG00000094724 Rnaset2b 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2B protein-coding common_peak2_71_567_-0.191837135259302_9.05382855187503_1.30177282647657 chr15 62037583 62039044 + 1.30177282647657 NA promoter-TSS (NR_132746) promoter-TSS (NR_132746) 327 NR_003368 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 plasmacytoma variant translocation 1 ncRNA common_peak2_96_638_0.165666242416414_9.4025052421552_1.30175674814742 chr6 90677868 90680317 + 1.30175674814742 NA intron (NM_001134383, intron 4 of 13) intron (NM_001134383, intron 4 of 13) 37437 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding unique_peak2_22_159_-0.383467290793853_7.13019444949044_1.30171170084457 chr5 139300075 139301064 + 1.30171170084457 NA intron (NM_172723, intron 3 of 10) intron (NM_172723, intron 3 of 10) 24895 NM_172723 231821 Mm.297819 NM_172723 ENSMUSG00000056413 Adap1 4930431P11Rik|Centa1|GC1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding common_peak1_98_655_0.16390245919608_9.43950323421612_1.30139733690685 chr13 64128879 64129979 + 1.30139733690685 NA promoter-TSS (NM_001001321) promoter-TSS (NM_001001321) -99 NM_001001321 70484 Mm.133731 NM_001001321 ENSMUSG00000033114 Slc35d2 5730408I21Rik|SQV7L|UGTrel8|hfrc|mUGTrel8 solute carrier family 35, member D2 protein-coding common_peak1_138_1015_0.133300094020436_10.0553347337824_1.30104303827128 chr17 33549211 33551530 + 1.30104303827128 NA intron (NR_037707, intron 21 of 24) intron (NR_037707, intron 21 of 24) -5337 NM_053214 17916 Mm.42019 NM_053214 ENSMUSG00000024300 Myo1f C330006B10Rik myosin IF protein-coding common_peak1_44_332_-0.25319972950663_8.25277850231795_1.30059439122921 chrX 12587710 12588445 + 1.30059439122921 NA intron (NM_027439, intron 1 of 8) CpG 318 NM_027439 70495 Mm.25148 NM_027439 ENSMUSG00000031007 Atp6ap2 (P)RR|5730403E06Rik|APT6M8-9|ATP6M8-9|Atp6ip2|M8-9|PRR ATPase, H+ transporting, lysosomal accessory protein 2 protein-coding common_peak2_53_408_-0.227137154915798_8.56238845548385_1.30057648116741 chr2 35299282 35300559 + 1.30057648116741 NA intron (NM_146120, intron 10 of 16) intron (NM_146120, intron 10 of 16) 17540 NM_146120 227753 Mm.443 NM_146120 ENSMUSG00000026879 Gsn ADF gelsolin protein-coding common_peak1_53_408_-0.227137154915798_8.56238845548385_1.30057648116741 chr1 59762492 59763379 + 1.30057648116741 NA Intergenic CpG -1344 NM_007561 12168 Mm.7106 NM_007561 ENSMUSG00000067336 Bmpr2 2610024H22Rik|AL117858|AW546137|BB189135|BMP-2|BMPR-2|BMPR-II|BMPRII|BRK-3|Gm20272 bone morphogenetic protein receptor, type II (serine/threonine kinase) protein-coding common_peak2_113_966_-0.14626104874031_9.84424155510669_1.30032391967713 chr17 40933784 40935649 + 1.30032391967713 NA promoter-TSS (NM_008650) promoter-TSS (NM_008650) 31 NM_008650 17850 Mm.259884 NM_008650 ENSMUSG00000023921 Mut D230010K02Rik|Mcm methylmalonyl-Coenzyme A mutase protein-coding common_peak1_25_109_0.374061531116272_6.9683904790828_1.30019425906985-5 chrX 98936577 98937135 + 1.30019425906985 NA promoter-TSS (NM_207633) promoter-TSS (NM_207633) -925 NM_207633 77929 Mm.212290 NM_207633 ENSMUSG00000047694 Yipf6 A430107J06Rik Yip1 domain family, member 6 protein-coding common_peak1_25_109_0.374061531116272_6.9683904790828_1.30019425906985-4 chr8 90876985 90877605 + 1.30019425906985 NA intron (NM_177224, intron 2 of 39) intron (NM_177224, intron 2 of 39) 48460 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak1_25_109_0.374061531116272_6.9683904790828_1.30019425906985 chr2 26909732 26910210 + 1.30019425906985 NA promoter-TSS (NM_013721) promoter-TSS (NM_013721) 671 NM_011513 20933 Mm.397932 NM_011513 ENSMUSG00000015776 Med22 AW212655|AW558812|Surf-5|Surf5 mediator complex subunit 22 protein-coding unique_peak2_25_109_0.374061531116272_6.9683904790828_1.30019425906985 chr16 3988359 3989199 + 1.30019425906985 NA intron (NM_177472, intron 9 of 14) intron (NM_177472, intron 9 of 14) -12147 NM_001081280 268857 Mm.215994 NM_175547 ENSMUSG00000049871 Nlrc3 CLR16.2|D230007K08Rik|mFLJ00348 NLR family, CARD domain containing 3 protein-coding common_peak1_25_109_0.374061531116272_6.9683904790828_1.30019425906985-3 chr5 104982270 104982886 + 1.30019425906985 NA 5' UTR (NM_030239, exon 1 of 16) 5' UTR (NM_030239, exon 1 of 16) 139 NM_030239 27405 Mm.389663 NM_030239 ENSMUSG00000029299 Abcg3 Abcp2|Mxr2 ATP-binding cassette, sub-family G (WHITE), member 3 protein-coding common_peak1_25_109_0.374061531116272_6.9683904790828_1.30019425906985-2 chr2 170117097 170117713 + 1.30019425906985 NA intron (NM_001159683, intron 3 of 6) intron (NM_001159683, intron 3 of 6) 13815 NM_001033299 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_25_109_0.374061531116272_6.9683904790828_1.30019425906985 chr4 106678301 106679017 + 1.30019425906985 NA promoter-TSS (NM_001172073) promoter-TSS (NM_001172073) 27 NM_001172073 72354 Mm.25806 NM_028209 ENSMUSG00000025413 Ttc4 2810002P21Rik|AF007005|L62 tetratricopeptide repeat domain 4 protein-coding common_peak2_21_151_-0.388129770749634_7.05386262806877_1.30017784519648 chr2 152847949 152848577 + 1.30017784519648 NA 5' UTR (NM_001141977, exon 1 of 18) 5' UTR (NM_001141977, exon 1 of 18) 299 NM_028109 72119 Mm.407737 NM_028109 ENSMUSG00000027469 Tpx2 2610005B21Rik|DIL2|REPP86|p100 TPX2, microtubule-associated protein-coding common_peak1_42_217_0.277542845477025_7.90695574751544_1.2998751129921 chr15 101469275 101470033 + 1.2998751129921 NA intron (NM_016879, intron 6 of 9) (TG)n|Simple_repeat|Simple_repeat -3824 NM_010667 16679 Mm.383183 NM_010667 ENSMUSG00000067614 Krt86 5430421N21Rik|AI325212|Khb4|Krt2-10|Krt2-11|MHb4 keratin 86 protein-coding common_peak2_42_217_0.277542845477025_7.90695574751544_1.2998751129921 chr18 64887230 64888449 + 1.2998751129921 NA promoter-TSS (NM_001114386) promoter-TSS (NM_001114386) 83 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding common_peak2_33_243_-0.30058876540236_7.78044295486171_1.29987228433598-2 chr6 39810226 39811041 + 1.29987228433598 NA intron (NM_010270, intron 1 of 2) intron (NM_010270, intron 1 of 2) 303 NM_010270 14548 Mm.377071 NM_010270 ENSMUSG00000029918 Mrps33 AI841153|CGI-139|Gdap3|MRP-S33|PTD003 mitochondrial ribosomal protein S33 protein-coding common_peak1_33_243_-0.30058876540236_7.78044295486171_1.29987228433598 chr2 73386575 73387174 + 1.29987228433598 NA promoter-TSS (NM_001276444) promoter-TSS (NM_001276444) -394 NM_001276444 68526 Mm.451014 NM_001080707 ENSMUSG00000041762 Gpr155 1110017O10Rik|DEPDC3|F730029F15Rik|PGR22 G protein-coupled receptor 155 protein-coding common_peak2_33_243_-0.30058876540236_7.78044295486171_1.29987228433598 chr15 37775603 37777314 + 1.29987228433598 NA intron (NM_134094, intron 1 of 6) intron (NM_134094, intron 1 of 6) 15542 NM_001170866 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak1_66_522_-0.200123436097218_8.93060541819833_1.29953505229953 chrX 104482572 104483628 + 1.29953505229953 NA exon (NM_001081189, exon 1 of 7) exon (NM_001081189, exon 1 of 7) 318 NM_001081189 331487 Mm.438275 NM_001081189 ENSMUSG00000073016 Uprt Gm774 uracil phosphoribosyltransferase protein-coding common_peak1_37_275_-0.281547942194922_7.96775048568071_1.29918219834418 chr11 106541886 106542486 + 1.29918219834418 NA intron (NM_198292, intron 5 of 11) intron (NM_198292, intron 5 of 11) 41195 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA common_peak1_54_302_0.238117034912964_8.36223250092943_1.29895884588749 chr13 37833041 37833997 + 1.29895884588749 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) 6126 NM_001039188 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_54_302_0.238117034912964_8.36223250092943_1.29895884588749-2 chr8 95852683 95853531 + 1.29895884588749 NA intron (NM_172758, intron 1 of 11) intron (NM_172758, intron 1 of 11) 384 NM_172758 234595 Mm.29267 NM_172758 ENSMUSG00000036534 Slc38a7 D430050E18 solute carrier family 38, member 7 protein-coding common_peak2_47_357_-0.243427997985805_8.36210177827135_1.29895884588739 chr7 128028809 128030258 + 1.29895884588739 NA Intergenic ORR1A2|LTR|ERVL-MaLR 25155 NM_001079932 434246 Mm.389924 NM_001079932 ENSMUSG00000042828 Trim72 BC067209|MG53 tripartite motif-containing 72 protein-coding common_peak1_47_357_-0.243427997985805_8.36210177827135_1.29895884588739-2 chr17 27565140 27565997 + 1.29895884588739 NA intron (NM_001002895, intron 1 of 4) CpG 159 NM_001002895 106672 Mm.61488 NM_001002895 ENSMUSG00000062753 AI413582 AI854251 expressed sequence AI413582 protein-coding common_peak1_47_357_-0.243427997985805_8.36210177827135_1.29895884588739 chr11 70920496 70921570 + 1.29895884588739 NA intron (NM_001291142, intron 10 of 16) intron (NM_001291142, intron 10 of 16) 48940 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding common_peak1_99_829_-0.157727711725192_9.61810367037169_1.29890236098696 chr2 173021695 173023200 + 1.29890236098696 NA intron (NM_019547, intron 1 of 3) intron (NM_019547, intron 1 of 3) 545 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak1_12_87_-0.53062268518272_6.19412027604594_1.29803038895611 chr14 36962767 36963104 + 1.29803038895611 NA intron (NM_027045, intron 1 of 10) intron (NM_027045, intron 1 of 10) 5829 NM_027045 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding common_peak1_12_87_-0.53062268518272_6.19412027604594_1.29803038895611-2 chr9 13446782 13447150 + 1.29803038895611 NA Intergenic Intergenic 15605 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA unique_peak2_12_87_-0.53062268518272_6.19412027604594_1.29803038895611-2 chr12 19119702 19120335 + 1.29803038895611 NA Intergenic MMVL30-int|LTR|ERV1 605508 NM_001201330 236366 Mm.352227 NM_001033157 ENSMUSG00000073197 5730507C01Rik - RIKEN cDNA 5730507C01 gene protein-coding unique_peak2_12_87_-0.53062268518272_6.19412027604594_1.29803038895611 chr10 117969960 117970589 + 1.29803038895611 NA Intergenic Intergenic 44815 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_28_204_-0.330816784992878_7.51407170700901_1.29772649655676 chr1 165763668 165764282 + 1.29772649655676 NA exon (NM_011804, exon 1 of 4) exon (NM_011804, exon 1 of 4) 195 NM_011804 433375 Mm.294885 NM_011804 ENSMUSG00000040713 Creg1 AA755314|Creg cellular repressor of E1A-stimulated genes 1 protein-coding common_peak1_28_204_-0.330816784992878_7.51407170700901_1.29772649655676-2 chr15 76069026 76069580 + 1.29772649655676 NA TTS (NM_133691) TTS (NM_133691) 481 NM_134089 105782 Mm.25568 NM_134089 ENSMUSG00000022568 Scrib AI118201|CRIB|Crc|SCRIB1|Scrb1|mKIAA0147|vartul scribbled planar cell polarity protein-coding common_peak1_236_2006_0.095408705903985_11.0185292543146_1.29768409535616 chr8 126852386 126853350 + 1.29768409535616 NA Intergenic Intergenic 93053 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak2_176_1384_0.113990660258558_10.4926655910658_1.29739985639126 chr8 61487300 61488816 + 1.29739985639126 NA intron (NM_145595, intron 1 of 4) CpG 324 NM_145595 234309 Mm.29059 NM_145595 ENSMUSG00000031641 Cbr4 A730083J17Rik|BC009118 carbonyl reductase 4 protein-coding common_peak1_137_1208_-0.130390897815973_10.1744030803411_1.29734519777495 chr11 83064761 83066460 + 1.29734519777495 NA intron (NM_011408, intron 1 of 1) intron (NM_011408, intron 1 of 1) 498 NM_011408 20556 Mm.278689 NM_011408 ENSMUSG00000072620 Slfn2 Shlf2 schlafen 2 protein-coding common_peak2_50_383_-0.2372917235937_8.46631663892431_1.29718422876303 chr3 36474897 36476671 + 1.29718422876303 NA promoter-TSS (NM_028183) promoter-TSS (NM_028183) 103 NM_009673 11747 Mm.1620 NM_009673 ENSMUSG00000027712 Anxa5 Anx5|R74653 annexin A5 protein-coding common_peak1_50_383_-0.2372917235937_8.46631663892431_1.29718422876303 chr1 39986144 39987010 + 1.29718422876303 NA intron (NM_001252200, intron 9 of 31) intron (NM_001252200, intron 9 of 31) 85664 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding common_peak2_82_668_-0.176356531473113_9.29768413490491_1.29706499778364 chr5 34635769 34637943 + 1.29706499778364 NA intron (NM_026660, intron 1 of 12) intron (NM_026660, intron 1 of 12) 258 NM_026660 68294 Mm.34564 NM_026660 ENSMUSG00000001082 Mfsd10 0610009O03Rik|Tetran major facilitator superfamily domain containing 10 protein-coding common_peak1_276_2444_0.086601299207933_11.2989193994436_1.29661147617104 chr1 74390889 74393212 + 1.29661147617104 NA intron (NM_153088, intron 1 of 6) CpG 441 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding common_peak2_134_978_0.13514810411422_10.0027391016608_1.29659708876201 chr11 50133387 50135804 + 1.29659708876201 NA intron (NM_001290759, intron 1 of 21) intron (NM_001290759, intron 1 of 21) 3235 NM_029745 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding common_peak2_389_3762_0.0699937736046543_11.9126644608702_1.29631168872487 chr3 90078757 90083933 + 1.29631168872487 NA intron (NM_001271764, intron 1 of 8) PB1D10|SINE|Alu 1824 NM_001293749 59069 Mm.240839 NM_022314 ENSMUSG00000027940 Tpm3 TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm tropomyosin 3, gamma protein-coding common_peak1_257_2530_-0.0890177945170958_11.2609828948521_1.29625875135522 chr11 97799172 97801197 + 1.29625875135522 NA intron (NM_010688, intron 1 of 6) CpG 512 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak1_30_139_0.33739918778934_7.29798261083964_1.2957158994254 chr19 5433373 5433924 + 1.2957158994254 NA Intergenic Intergenic 8504 NM_001256515 107242 Mm.329658 NM_134149 ENSMUSG00000047423 AI837181 Bles03|N28173 expressed sequence AI837181 protein-coding common_peak1_30_139_0.33739918778934_7.29798261083964_1.2957158994254-2 chr6 57582592 57583110 + 1.2957158994254 NA intron (NM_025992, intron 1 of 22) intron (NM_025992, intron 1 of 22) 1859 NM_025992 67138 Mm.297393 NM_025992 ENSMUSG00000029798 Herc6 1700121D12Rik|2510038N07Rik|4930427L17Rik|AI451296|CEB1|Herc5 hect domain and RLD 6 protein-coding common_peak2_151_1353_-0.122810886619039_10.3416065802655_1.29474750567944 chr3 58690522 58693100 + 1.29474750567944 NA promoter-TSS (NR_045167) promoter-TSS (NR_045167) 577 NM_009174 20439 Mm.2847 NM_009174 ENSMUSG00000036432 Siah2 AA415433|Sinh2 seven in absentia 2 protein-coding common_peak2_38_190_0.295514621572112_7.7251861388218_1.29431977688445 chrX 166479055 166480242 + 1.29431977688445 NA 5' UTR (NM_019773, exon 1 of 3) 5' UTR (NM_019773, exon 1 of 3) 219 NM_019773 56382 Mm.25306 NM_019773 ENSMUSG00000079316 Rab9 2410064E05Rik|AI195561|Rab9a|Sid6061p RAB9, member RAS oncogene family protein-coding common_peak1_38_190_0.295514621572112_7.7251861388218_1.29431977688445-2 chr13 97241188 97241937 + 1.29431977688445 NA intron (NM_007930, intron 1 of 2) CpG 457 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding common_peak1_38_190_0.295514621572112_7.7251861388218_1.29431977688445 chr1 136624298 136624896 + 1.29431977688445 NA promoter-TSS (NM_177643) promoter-TSS (NM_177643) -304 NM_177643 226442 Mm.62521 NM_177643 ENSMUSG00000041483 Zfp281 Znf281 zinc finger protein 281 protein-coding common_peak1_84_687_-0.174622906849606_9.33895330127729_1.29426310727501 chr4 118408723 118409985 + 1.29426310727501 NA promoter-TSS (NM_198170) promoter-TSS (NM_198170) 17 NM_020000 80509 Mm.259567 NM_020000 ENSMUSG00000006392 Med8 2210021A15Rik|AB041805|ARC32 mediator complex subunit 8 protein-coding common_peak2_207_1700_0.103090752536616_10.7837128019317_1.29426081143977 chr15 66576956 66578753 + 1.29426081143977 NA intron (NM_001081409, intron 1 of 20) CpG 282 NM_001081409 239510 Mm.267473 NM_178718 ENSMUSG00000072501 Phf20l1 CGI-72|E130113K22Rik PHD finger protein 20-like 1 protein-coding common_peak2_133_1166_-0.131432834371269_10.1228724285217_1.29425109209199 chr2 48948330 48950539 + 1.29425109209199 NA promoter-TSS (NM_011958) promoter-TSS (NM_011958) -74 NM_029924 109241 Mm.440436 NM_029924 ENSMUSG00000036792 Mbd5 9430004D19Rik|AA536666|AI426407|C030040A15Rik|Gm1630|OTTMUSG00000012483 methyl-CpG binding domain protein 5 protein-coding common_peak2_132_960_0.135507691888611_9.97614646671806_1.29407859775413 chr4 152476902 152478608 + 1.29407859775413 NA promoter-TSS (NM_001252654) promoter-TSS (NM_001252654) -206 NM_010598 16498 Mm.388924 NM_010598 ENSMUSG00000028931 Kcnab2 F5|I2rf5|Kcnb3|kv-beta-2 potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein-coding common_peak1_51_281_0.242482203428494_8.26079245411304_1.29407693552123 chr7 31036553 31037625 + 1.29407693552123 NA intron (NM_001287213, intron 5 of 8) intron (NM_001287213, intron 5 of 8) 3228 NR_106017 102465635 NR_106017 ENSMUSG00000098783 Mir7050 Gm27578|mmu-mir-7050 microRNA 7050 ncRNA common_peak2_76_472_0.191025167433672_8.98120895705623_1.29396061347946 chr4 33309691 33311138 + 1.29396061347946 NA 5' UTR (NM_001305273, exon 1 of 16) 5' UTR (NM_001305273, exon 1 of 16) 103 NM_001305273 24018 Mm.240024 NM_011884 ENSMUSG00000028274 Rngtt AU020997|HCE|MCE1 RNA guanylyltransferase and 5'-phosphatase protein-coding common_peak2_24_103_0.385575473995292_6.89322745513874_1.29362631573284 chr13 52822819 52823648 + 1.29362631573284 NA Intergenic Intergenic -66028 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak1_19_136_-0.40689785532975_6.89458315529565_1.29362631573284-3 chr7 83661121 83661583 + 1.29362631573284 NA intron (NM_010551, intron 11 of 18) intron (NM_010551, intron 11 of 18) 29335 NM_023377 170460 Mm.357953 NM_023377 ENSMUSG00000046027 Stard5 2310058G22Rik|AI607880|D7Ertd152e StAR-related lipid transfer (START) domain containing 5 protein-coding common_peak1_24_103_0.385575473995292_6.89322745513874_1.29362631573284 chr2 69205748 69206188 + 1.29362631573284 NA 5' UTR (NM_001199123, exon 1 of 7) 5' UTR (NM_001199123, exon 1 of 7) 245 NM_025565 66442 Mm.272969 NM_025565 ENSMUSG00000005233 Spc25 2600017H08Rik|2610205L13Rik|Spbc25 SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) protein-coding common_peak1_19_136_-0.40689785532975_6.89458315529565_1.29362631573284-2 chr2 180024292 180024683 + 1.29362631573284 NA promoter-TSS (NM_177727) promoter-TSS (NM_177727) -500 NM_177727 241846 Mm.21577 NM_177727 ENSMUSG00000039108 Lsm14b 9430078B04|BC040823 LSM family member 14B protein-coding unique_peak2_19_136_-0.40689785532975_6.89458315529565_1.29362631573284 chr18 6666331 6667476 + 1.29362631573284 NA Intergenic MMVL30-int|LTR|ERV1 63270 NM_027598 70901 Mm.158484 NM_027598 ENSMUSG00000039540 4921524L21Rik - RIKEN cDNA 4921524L21 gene protein-coding common_peak1_19_136_-0.40689785532975_6.89458315529565_1.29362631573284 chr10 77534157 77534567 + 1.29362631573284 NA intron (NM_008404, intron 1 of 15) intron (NM_008404, intron 1 of 15) 4014 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding unique_peak2_24_103_0.385575473995292_6.89322745513874_1.29362631573284 chrX 20159934 20160824 + 1.29362631573284 NA intron (NM_177353, intron 10 of 16) intron (NM_177353, intron 10 of 16) 100809 NM_021715 60322 Mm.44827 NM_021715 ENSMUSG00000037347 Chst7 2600013M07Rik|C6ST-2|GST5|Gn6st-4|glcNAc6ST-4 carbohydrate (N-acetylglucosamino) sulfotransferase 7 protein-coding common_peak2_86_705_-0.170726542605328_9.37816110196852_1.29343232061855 chr6 127560723 127562590 + 1.29343232061855 NA Intergenic Intergenic -16319 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak1_58_452_-0.217840835004409_8.71444682254403_1.29327457711076 chr3 89960780 89961648 + 1.29327457711076 NA intron (NM_001081182, intron 1 of 27) intron (NM_001081182, intron 1 of 27) 2118 NM_001081182 54667 Mm.30455 NM_001081182 ENSMUSG00000060671 Atp8b2 Id ATPase, class I, type 8B, member 2 protein-coding common_peak2_341_3189_0.075904838237582_11.677293127771_1.29320758337108 chr6 52712385 52715074 + 1.29320758337108 NA promoter-TSS (NM_025816) promoter-TSS (NM_025816) 0 NM_025816 52440 Mm.389757 NM_025816 ENSMUSG00000004535 Tax1bp1 1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151 Tax1 (human T cell leukemia virus type I) binding protein 1 protein-coding unique_peak2_40_299_-0.267375425430456_8.09513097778065_1.29304430593403 chr4 33289021 33290369 + 1.29304430593403 NA Intergenic Intergenic -20616 NM_011884 24018 Mm.240024 NM_011884 ENSMUSG00000028274 Rngtt AU020997|HCE|MCE1 RNA guanylyltransferase and 5'-phosphatase protein-coding common_peak1_40_299_-0.267375425430456_8.09513097778065_1.29304430593403 chr9 50603237 50603871 + 1.29304430593403 NA promoter-TSS (NM_013897) promoter-TSS (NM_013897) 295 NM_025848 66925 Mm.10406 NM_025848 ENSMUSG00000000171 Sdhd 3110001M13Rik|AVLL5809|C78570|PRO19626 succinate dehydrogenase complex, subunit D, integral membrane protein protein-coding common_peak2_34_164_0.315123500277718_7.52388396438467_1.29230187923203 chr1 138275725 138276812 + 1.29230187923203 NA intron (NM_177397, intron 1 of 2) intron (NM_177397, intron 1 of 2) 2530 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_34_164_0.315123500277718_7.52388396438467_1.29230187923203-2 chr5 148888370 148889011 + 1.29230187923203 NA intron (NM_153572, intron 9 of 10) B1_Mus2|SINE|Alu 39957 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak1_34_164_0.315123500277718_7.52388396438467_1.29230187923203 chr15 95790811 95791531 + 1.29230187923203 NA intron (NM_175344, intron 1 of 19) CpG 328 NM_001253813 105722 Mm.38087 NM_175344 ENSMUSG00000064210 Ano6 2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f anoctamin 6 protein-coding common_peak1_20_144_-0.402434446216437_6.97869186690672_1.29227910197167 chr15 83425340 83425850 + 1.29227910197167 NA intron (NM_001159509, intron 1 of 10) intron (NM_001159509, intron 1 of 10) 7255 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_20_144_-0.402434446216437_6.97869186690672_1.29227910197167-2 chr6 37820557 37820981 + 1.29227910197167 NA Intergenic Intergenic -50042 NM_001272064 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak1_414_4068_0.0671528909729577_12.0240350105602_1.292240889988 chr6 129229433 129233058 + 1.292240889988 NA Intergenic RMER17C|LTR|ERVK 6800 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak1_131_1146_-0.133105105982233_10.0970971230247_1.29200912772554 chr10 76442076 76442992 + 1.29200912772554 NA intron (NM_008787, intron 1 of 41) CpG 378 NM_008787 18541 Mm.251794 NM_008787 ENSMUSG00000001151 Pcnt AW476095|C86676|KEN|Pcnt2|kendrin|m239Asp|m275Asp pericentrin (kendrin) protein-coding common_peak2_59_340_0.221640814759887_8.52444833640412_1.29186624997177 chr12 82469811 82471410 + 1.29186624997177 NA Intergenic Intergenic -146315 NM_001310478 50779 Mm.126176 NM_015812 ENSMUSG00000021219 Rgs6 - regulator of G-protein signaling 6 protein-coding common_peak1_140_1238_-0.127694868561299_10.21111303786_1.29150960709581 chr5 143314211 143315589 + 1.29150960709581 NA intron (NM_172726, intron 1 of 5) Charlie17b|DNA|hAT-Charlie 460 NM_172726 231868 Mm.440105 NM_172726 ENSMUSG00000039244 E130309D02Rik A630028N22 RIKEN cDNA E130309D02 gene protein-coding common_peak1_173_1586_-0.112676270982973_10.5757482773437_1.29130862566365 chr16 38522025 38523605 + 1.29130862566365 NA promoter-TSS (NM_024273) promoter-TSS (NM_024273) -152 NM_024273 76916 Mm.132231 NM_024273 ENSMUSG00000002846 Timmdc1 2810021C21Rik|4930455C21Rik|AV135763 translocase of inner mitochondrial membrane domain containing 1 protein-coding common_peak1_160_1226_0.121077379696073_10.3214582235109_1.29070080116669 chr9 75558521 75559733 + 1.29070080116669 NA intron (NM_016963, intron 1 of 9) intron (NM_016963, intron 1 of 9) 530 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak2_111_769_0.151074736808374_9.66425200398645_1.29042190788345 chr3 105899570 105901725 + 1.29042190788345 NA intron (NM_027025, intron 1 of 6) intron (NM_027025, intron 1 of 6) -3774 NM_009631 11542 Mm.235024 NM_009631 ENSMUSG00000000562 Adora3 A3AR|A3R|AA3R|ARA3|Gpcr2 adenosine A3 receptor protein-coding common_peak1_27_196_-0.335487069438451_7.45430828473715_1.29019825424853 chr17 29659935 29660461 + 1.29019825424853 NA promoter-TSS (NM_028791) promoter-TSS (NM_028791) -397 NM_028791 74157 Mm.390979 NM_028791 ENSMUSG00000024019 Cmtr1 1300018I05Rik|AI451264|Ftsjd2|MTr1 cap methyltransferase 1 protein-coding unique_peak2_27_196_-0.335487069438451_7.45430828473715_1.29019825424853 chr17 23979624 23981080 + 1.29019825424853 NA Intergenic Intergenic -5122 NM_013921 30943 Mm.142568 NM_013921 ENSMUSG00000024124 Prss30 2010015P21Rik|Disp|Disp1|Tmprss8 protease, serine 30 protein-coding common_peak1_27_196_-0.335487069438451_7.45430828473715_1.29019825424853-2 chr5 28070508 28071040 + 1.29019825424853 NA promoter-TSS (NM_153526) promoter-TSS (NM_153526) -638 NM_153526 231070 Mm.30221 NM_153526 ENSMUSG00000045294 Insig1 1810013C12Rik|Insig-1 insulin induced gene 1 protein-coding common_peak1_243_2082_0.0932969493790363_11.0710955987302_1.29007199729712 chr2 69722130 69723771 + 1.29007199729712 NA promoter-TSS (NM_001081086) promoter-TSS (NM_001081086) -138 NM_001081086 228005 Mm.11815 NM_001081086 ENSMUSG00000042133 Ppig AU019516|AU022200|B230312B02Rik|CYP|SRCyp peptidyl-prolyl isomerase G (cyclophilin G) protein-coding common_peak2_93_613_0.167648553242197_9.34591912199128_1.28968416082818 chr4 126096022 126097372 + 1.28968416082818 NA promoter-TSS (NM_138721) promoter-TSS (NM_138721) 44 NM_138721 116748 Mm.41865 NM_138721 ENSMUSG00000050188 Lsm10 - U7 snRNP-specific Sm-like protein LSM10 protein-coding common_peak1_93_613_0.167648553242197_9.34591912199128_1.28968416082818 chr2 57114129 57115062 + 1.28968416082818 NA intron (NM_001139509, intron 1 of 7) CpG 443 NM_013613 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak2_32_235_-0.305323101700962_7.72998149851136_1.28963970893563 chr2 34912961 34914561 + 1.28963970893563 NA intron (NM_028716, intron 1 of 14) intron (NM_028716, intron 1 of 14) 215 NM_028716 74016 Mm.65691 NM_028716 ENSMUSG00000026873 Phf19 3110009G19Rik|3321402G02Rik PHD finger protein 19 protein-coding common_peak2_32_235_-0.305323101700962_7.72998149851136_1.28963970893563-2 chr3 51652353 51653457 + 1.28963970893563 NA Intergenic Intergenic -8274 NM_174995 211666 Mm.24679 NM_174995 ENSMUSG00000074604 Mgst2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding common_peak1_32_235_-0.305323101700962_7.72998149851136_1.28963970893563 chr15 98832516 98833112 + 1.28963970893563 NA 3' UTR (NM_001033276, exon 55 of 55) 3' UTR (NM_001033276, exon 55 of 55) -1306 NM_016781 19082 Mm.6670 NM_016781 ENSMUSG00000067713 Prkag1 AA571379|BB036179|Prkaac protein kinase, AMP-activated, gamma 1 non-catalytic subunit protein-coding common_peak2_71_432_0.199686769518655_8.85806659948605_1.28940149191771 chr1 9943366 9944839 + 1.28940149191771 NA promoter-TSS (NR_024067) promoter-TSS (NR_024067) 16 NR_024067 73824 Mm.28311 NR_024067 ENSMUSG00000098234 Snhg6 1110008H02Rik small nucleolar RNA host gene 6 ncRNA common_peak1_153_1159_0.123424761944488_10.2416214709872_1.28939078432779 chr18 74999961 75001436 + 1.28939078432779 NA promoter-TSS (NR_028552) promoter-TSS (NR_028552) 221 NM_001002239 319195 Mm.276337 NM_001002239 ENSMUSG00000062328 Rpl17 - ribosomal protein L17 protein-coding common_peak1_70_558_-0.193544926996173_9.0299320093451_1.28917485672364 chr19 46689649 46690514 + 1.28917485672364 NA exon (NM_025563, exon 1 of 5) exon (NM_025563, exon 1 of 5) 175 NM_025563 66439 Mm.87163 NM_025563 ENSMUSG00000062376 Borcs7 2010012O05Rik|4930569L17Rik|AI413851|AI467257 BLOC-1 related complex subunit 7 protein-coding common_peak1_13_94_-0.509903169499378_6.31490402358126_1.28892327576413 chr5 125057117 125057523 + 1.28892327576413 NA intron (NM_001253904, intron 17 of 47) intron (NM_001253904, intron 17 of 47) 53845 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak2_13_94_-0.509903169499378_6.31490402358126_1.28892327576413-2 chr12 114612129 114612839 + 1.28892327576413 NA Intergenic Intergenic -98790 NR_106063 102465664 NR_106063 ENSMUSG00000098357 Mir7094-2 Gm27508|mmu-mir-7094-2 microRNA 7094-2 ncRNA common_peak1_13_94_-0.509903169499378_6.31490402358126_1.28892327576413-2 chr7 118855292 118855689 + 1.28892327576413 NA promoter-TSS (NM_001081446) promoter-TSS (NM_001081446) 123 NM_001168220 66356 Mm.482278 NM_023197 ENSMUSG00000030980 Knop1 2310008H09Rik|Tsg118 lysine rich nucleolar protein 1 protein-coding unique_peak2_13_94_-0.509903169499378_6.31490402358126_1.28892327576413-3 chr2 119618700 119619451 + 1.28892327576413 NA promoter-TSS (NM_001042653) promoter-TSS (NM_001042653) -570 NM_001042653 70645 Mm.246412 NM_001042653 ENSMUSG00000072980 Oip5 5730547N13Rik|Lint-25|Ms18b Opa interacting protein 5 protein-coding unique_peak2_13_94_-0.509903169499378_6.31490402358126_1.28892327576413 chr11 116012223 116012824 + 1.28892327576413 NA exon (NM_016905, exon 1 of 8) exon (NM_016905, exon 1 of 8) 196 NM_016905 14635 Mm.2820 NM_016905 ENSMUSG00000020766 Galk1 AA409894|GALK|Gk|Glk|Glk1 galactokinase 1 protein-coding common_peak1_18_129_-0.422003609631564_6.81136600821267_1.28823262083997-4 chr5 139826530 139826951 + 1.28823262083997 NA 5' UTR (NM_025604, exon 1 of 3) 5' UTR (NM_025604, exon 1 of 3) 103 NM_025604 66506 Mm.29070 NM_025604 ENSMUSG00000029551 Psmg3 1810042K04Rik|4930403H09Rik|AI303239 proteasome (prosome, macropain) assembly chaperone 3 protein-coding common_peak2_18_129_-0.422003609631564_6.81136600821267_1.28823262083997 chr7 19359287 19359936 + 1.28823262083997 NA promoter-TSS (NM_145822) promoter-TSS (NM_145822) -128 NM_145822 70333 Mm.171370 NM_145822 ENSMUSG00000047649 Cd3eap 1190028F09|2610103M17Rik|ASE-1|Ase1|CAST|PAF49 CD3E antigen, epsilon polypeptide associated protein protein-coding unique_peak2_18_129_-0.422003609631564_6.81136600821267_1.28823262083997-4 chr8 121907049 121907788 + 1.28823262083997 NA promoter-TSS (NM_001033485) promoter-TSS (NM_001033485) 268 NM_011404 20539 Mm.22374 NM_011404 ENSMUSG00000040010 Slc7a5 4F2LC|D0H16S474E|LAT1|TA1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 protein-coding common_peak1_18_129_-0.422003609631564_6.81136600821267_1.28823262083997-6 chrX 95957330 95957661 + 1.28823262083997 NA promoter-TSS (NM_152822) promoter-TSS (NM_152822) -521 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding unique_peak2_18_129_-0.422003609631564_6.81136600821267_1.28823262083997 chr2 57161994 57162958 + 1.28823262083997 NA intron (NR_040356, intron 1 of 2) MIRc|SINE|MIR 19278 NR_040356 767815 Mm.188065 NR_040356 ENSMUSG00000084938 BB557941 - expressed sequence BB557941 ncRNA common_peak1_18_129_-0.422003609631564_6.81136600821267_1.28823262083997-3 chr13 73740218 73740727 + 1.28823262083997 NA Intergenic Intergenic -23225 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak1_18_129_-0.422003609631564_6.81136600821267_1.28823262083997 chr1 162206902 162207370 + 1.28823262083997 NA intron (NM_172646, intron 14 of 19) intron (NM_172646, intron 14 of 19) -10487 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA unique_peak2_23_97_0.399065623976886_6.81424265610365_1.28823262083997 chr11 107455073 107455935 + 1.28823262083997 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 15216 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_23_97_0.399065623976886_6.81424265610365_1.28823262083997 chr5 134229583 134230110 + 1.28823262083997 NA promoter-TSS (NM_001286037) promoter-TSS (NM_001286037) -221 NR_104383 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak1_18_129_-0.422003609631564_6.81136600821267_1.28823262083997-5 chrX 13461776 13462207 + 1.28823262083997 NA Intergenic CpG -5681 NM_173415 236690 Mm.90233 NM_173415 ENSMUSG00000051228 Nyx CLNP|CSNB1|CSNB4|nob nyctalopin protein-coding unique_peak2_18_129_-0.422003609631564_6.81136600821267_1.28823262083997-3 chr6 130228357 130229530 + 1.28823262083997 NA intron (NM_014194, intron 2 of 6) intron (NM_014194, intron 2 of 6) 2744 NM_014194 16638 Mm.441781 NM_014194 ENSMUSG00000067599 Klra7 LGL-1|Ly-49G.1|Ly-49G.2|Ly-49G.3|Ly49G.4|Ly49g|Ly49g1|Ly49g2 killer cell lectin-like receptor, subfamily A, member 7 protein-coding common_peak1_18_129_-0.422003609631564_6.81136600821267_1.28823262083997-2 chr12 25317226 25317732 + 1.28823262083997 NA Intergenic Intergenic 188305 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak2_18_129_-0.422003609631564_6.81136600821267_1.28823262083997-2 chr2 128122733 128123544 + 1.28823262083997 NA 3' UTR (NM_028765, exon 18 of 18) 3' UTR (NM_028765, exon 18 of 18) -2900 NM_207681 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_159_1436_-0.117873185267491_10.4299077538236_1.28821951094438 chr11 52395440 52397734 + 1.28821951094438 NA exon (NM_153117, exon 1 of 3) exon (NM_153117, exon 1 of 3) 159 NM_153117 213673 Mm.291979 NM_153117 ENSMUSG00000036275 9530068E07Rik C85061|Kct2 RIKEN cDNA 9530068E07 gene protein-coding common_peak2_94_781_-0.162555007032141_9.52974729379128_1.28808809822233 chr7 140878552 140880839 + 1.28808809822233 NA intron (NM_022433, intron 1 of 6) intron (NM_022433, intron 1 of 6) 2174 NM_001127351 64384 Mm.29760 NM_022433 ENSMUSG00000025486 Sirt3 2310003L23Rik|AI848213|Sir2l3 sirtuin 3 protein-coding common_peak2_275_2434_0.0861138856497998_11.2927629997946_1.28766506949902 chr18 73814584 73818402 + 1.28766506949902 NA Intergenic Intergenic -1101 NM_145494 107029 Mm.36817 NM_145494 ENSMUSG00000024556 Me2 AW120568|D030040L20Rik|NAD-ME malic enzyme 2, NAD(+)-dependent, mitochondrial protein-coding common_peak2_36_267_-0.286305539246362_7.92293642083459_1.28753033772291 chr13 62879404 62880950 + 1.28753033772291 NA intron (NM_019395, intron 1 of 6) intron (NM_019395, intron 1 of 6) 8105 NM_019395 14121 Mm.423078 NM_019395 ENSMUSG00000069805 Fbp1 Fbp-2|Fbp2|Fbp3 fructose bisphosphatase 1 protein-coding common_peak2_170_1325_0.115768175590871_10.430749147908_1.28750428186153 chr19 53140542 53143725 + 1.28750428186153 NA promoter-TSS (NM_001164100) promoter-TSS (NM_001164100) -623 NM_001277100 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak1_43_324_-0.257885854035509_8.21535298089806_1.28746181046013 chr13 74522535 74523214 + 1.28746181046013 NA Intergenic Intergenic -28924 NM_146231 235956 Mm.296909 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak1_124_886_0.14133048471364_9.86345553665788_1.28744694204422 chr11 106672581 106674776 + 1.28744694204422 NA intron (NM_001305158, intron 12 of 14) intron (NM_001305158, intron 12 of 14) 41603 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak1_65_513_-0.201692290346642_8.90477840402056_1.28711325743755 chrX 166660805 166661840 + 1.28711325743755 NA promoter-TSS (NR_046015) promoter-TSS (NR_046015) -703 NR_046015 382255 Mm.336320 NR_046015 ENSMUSG00000086860 Gm1720 - predicted gene 1720 ncRNA common_peak1_190_1526_0.107887159189943_10.6304279263918_1.28705350276716 chr13 49212626 49214685 + 1.28705350276716 NA intron (NM_026738, intron 1 of 5) intron (NM_026738, intron 1 of 5) 2371 NM_026738 68480 Mm.3336 NM_026738 ENSMUSG00000037960 Card19 1110007C09Rik|AI851695|Bincard caspase recruitment domain family, member 19 protein-coding common_peak2_136_1197_-0.130074636253926_10.1613748746618_1.28704491890437 chr11 64079016 64080518 + 1.28704491890437 NA promoter-TSS (NM_178379) promoter-TSS (NM_178379) 283 NR_033780 66456 Mm.124828 NR_033780 ENSMUSG00000087497 2810001G20Rik AW045514 RIKEN cDNA 2810001G20 gene ncRNA common_peak1_125_1085_-0.136586916666223_10.0165149294712_1.28698494933567 chr8 121590433 121591158 + 1.28698494933567 NA intron (NM_026160, intron 1 of 3) CpG 327 NM_026160 67443 Mm.28357 NM_026160 ENSMUSG00000031812 Map1lc3b 1010001C15Rik|Atg8|LC3b|Map1lc3 microtubule-associated protein 1 light chain 3 beta protein-coding common_peak2_135_988_0.133546483774131_10.0165999526462_1.28698494933488 chr19 21777216 21779416 + 1.28698494933488 NA promoter-TSS (NM_031997) promoter-TSS (NM_031997) -24 NM_001033759 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_60_469_-0.211997495518027_8.77051819880599_1.2868626728383 chr19 5874466 5875314 + 1.2868626728383 NA intron (NM_026169, intron 1 of 10) intron (NM_026169, intron 1 of 10) 318 NM_026169 67457 Mm.202092 NM_026169 ENSMUSG00000024816 Frmd8 1200004M23Rik|2310035N23Rik|4931429L16Rik|AU018809 FERM domain containing 8 protein-coding common_peak1_49_374_-0.238119282060502_8.43168714435299_1.28617300909224 chr1 93754101 93754742 + 1.28617300909224 NA promoter-TSS (NM_174874) promoter-TSS (NM_174874) 417 NM_025920 67026 Mm.272356 NM_025920 ENSMUSG00000026279 Thap4 2010320B01Rik THAP domain containing 4 protein-coding common_peak2_46_349_-0.248080024406311_8.32717109962917_1.2854173458608 chr4 155066158 155067702 + 1.2854173458608 NA promoter-TSS (NM_001042407) promoter-TSS (NM_001042407) -100 NM_001042407 668173 Mm.133114 NM_001042407 ENSMUSG00000029047 Pex10 AV128229|Gm142 peroxisomal biogenesis factor 10 protein-coding common_peak1_73_448_0.19582432765662_8.90848379856946_1.28505995877821-2 chrX 166440248 166441230 + 1.28505995877821 NA promoter-TSS (NM_025432) promoter-TSS (NM_025432) -16 NM_025432 66226 Mm.279752 NM_025432 ENSMUSG00000079317 Trappc2 1110066L09Rik|1810064C02Rik|AW496358|MIP-2A|Sedl|TRS20 trafficking protein particle complex 2 protein-coding common_peak1_73_448_0.19582432765662_8.90848379856946_1.28505995877821 chr15 8168568 8169529 + 1.28505995877821 NA promoter-TSS (NM_001162906) promoter-TSS (NM_001162906) -58 NM_001162906 73692 Mm.164436 NM_001162906 ENSMUSG00000039801 2410089E03Rik 4732468D17Rik|Hug|Jbts17|b2b012Clo RIKEN cDNA 2410089E03 gene protein-coding common_peak2_61_355_0.217561084954264_8.58451397344353_1.28494791257537 chr15 35937258 35938315 + 1.28494791257537 NA intron (NM_053071, intron 1 of 3) CpG 460 NM_053071 12864 Mm.548 NM_053071 ENSMUSG00000014313 Cox6c - cytochrome c oxidase subunit VIc protein-coding common_peak2_29_133_0.342567242139931_7.23737281152774_1.2845871285809 chr7 44401916 44402669 + 1.2845871285809 NA Intergenic B3A|SINE|B2 18166 NM_016663 20981 Mm.4824 NM_016663 ENSMUSG00000030731 Syt3 AI385753|sytIII synaptotagmin III protein-coding common_peak1_29_133_0.342567242139931_7.23737281152774_1.2845871285809-2 chr5 32138606 32139231 + 1.2845871285809 NA intron (NM_008037, intron 1 of 3) intron (NM_008037, intron 1 of 3) 2446 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_29_133_0.342567242139931_7.23737281152774_1.2845871285809 chr14 76505367 76505936 + 1.2845871285809 NA intron (NM_001310646, intron 4 of 4) intron (NM_001310646, intron 4 of 4) 1141 NM_009366 21807 Mm.153272 NM_009366 ENSMUSG00000022010 Tsc22d1 AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22 TSC22 domain family, member 1 protein-coding common_peak1_202_1902_-0.101860422495983_10.843129635026_1.28451017978912 chr3 65974235 65975554 + 1.28451017978912 NA Intergenic CpG -16669 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding unique_peak2_17_122_-0.437829143466573_6.72359993360595_1.28422958317963-3 chr7 127228379 127229298 + 1.28422958317963 NA Intergenic B2_Mm2|SINE|B2 4292 NR_030674 100043580 Mm.482209 NR_030674 ENSMUSG00000000486 Gm4532 - predicted gene 4532 ncRNA common_peak1_17_122_-0.437829143466573_6.72359993360595_1.28422958317963-2 chr15 90223713 90224164 + 1.28422958317963 NA promoter-TSS (NR_106106) promoter-TSS (NR_106106) -373 NM_001033441 380959 Mm.17853 NM_001033441 ENSMUSG00000075470 Alg10b AA469671|AU045404|AW123895|C85569|Deaf1|Gm917|nse5 asparagine-linked glycosylation 10B (alpha-1,2-glucosyltransferase) protein-coding common_peak1_17_122_-0.437829143466573_6.72359993360595_1.28422958317963 chr1 11097493 11097951 + 1.28422958317963 NA intron (NM_029525, intron 6 of 39) intron (NM_029525, intron 6 of 39) 104257 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding unique_peak2_17_122_-0.437829143466573_6.72359993360595_1.28422958317963 chr10 19938980 19939876 + 1.28422958317963 NA intron (NM_008580, intron 1 of 29) intron (NM_008580, intron 1 of 29) 4902 NM_008580 26408 Mm.6595 NM_008580 ENSMUSG00000071369 Map3k5 7420452D20Rik|ASK|ASK1|MAPKKK5|Mekk5 mitogen-activated protein kinase kinase kinase 5 protein-coding common_peak1_17_122_-0.437829143466573_6.72359993360595_1.28422958317963-3 chr5 69556253 69556675 + 1.28422958317963 NA promoter-TSS (NM_172711) promoter-TSS (NM_172711) -460 NM_172711 231279 Mm.21105 NM_172711 ENSMUSG00000029208 Guf1 4631409J12|AA407526|EF-4 GUF1 homolog, GTPase protein-coding unique_peak2_17_122_-0.437829143466573_6.72359993360595_1.28422958317963-2 chr6 31088110 31089124 + 1.28422958317963 NA Intergenic Intergenic -25524 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak2_120_850_0.143551522949485_9.8047910831607_1.28406602104704 chr1 21218116 21219490 + 1.28406602104704 NA 5' UTR (NM_029398, exon 1 of 5) 5' UTR (NM_029398, exon 1 of 5) 228 NM_029398 75712 Mm.304763 NM_029398 ENSMUSG00000025933 Tmem14a 5730496E24Rik|C85783|PTD011 transmembrane protein 14A protein-coding common_peak1_214_1774_0.100229447852865_10.8437180332058_1.2839750238995 chr12 69411516 69414321 + 1.2839750238995 NA Intergenic Intergenic 40768 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak1_14_101_-0.490381220560147_6.42723473169142_1.28370758086451-2 chr6 97220073 97220406 + 1.28370758086451 NA intron (NM_022992, intron 1 of 2) intron (NM_022992, intron 1 of 2) 9447 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding unique_peak2_14_101_-0.490381220560147_6.42723473169142_1.28370758086451-2 chr8 123001640 123002597 + 1.28370758086451 NA intron (NR_037865, intron 1 of 13) RSINE1|SINE|B4 40166 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak2_14_101_-0.490381220560147_6.42723473169142_1.28370758086451 chr14 54101917 54102908 + 1.28370758086451 NA Intergenic Intergenic 151517 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_14_101_-0.490381220560147_6.42723473169142_1.28370758086451 chr3 116861699 116862056 + 1.28370758086451 NA intron (NM_009146, intron 1 of 16) intron (NM_009146, intron 1 of 16) 197 NM_009146 20321 Mm.66293 NM_009146 ENSMUSG00000033386 Frrs1 AI131732|Sdfr2 ferric-chelate reductase 1 protein-coding common_peak1_44_231_0.26819764243706_7.9920798163461_1.28347804276582 chr17 70973846 70974840 + 1.28347804276582 NA exon (NM_023402, exon 4 of 4) exon (NM_023402, exon 4 of 4) 16173 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak1_26_188_-0.340034857381478_7.39222499553033_1.2832915957852-3 chr4 46592490 46592997 + 1.2832915957852 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) 9186 NM_001164804 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak1_26_188_-0.340034857381478_7.39222499553033_1.2832915957852-2 chr2 128319056 128319634 + 1.2832915957852 NA intron (NR_028590, intron 2 of 2) B3A|SINE|B2 110006 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_26_188_-0.340034857381478_7.39222499553033_1.2832915957852 chr14 19824013 19824387 + 1.2832915957852 NA promoter-TSS (NM_026528) promoter-TSS (NM_026528) -377 NM_026528 68045 Mm.21932 NM_026528 ENSMUSG00000021807 2700060E02Rik - RIKEN cDNA 2700060E02 gene protein-coding common_peak1_83_677_-0.174442196965133_9.31792036465378_1.28301964271737 chr16 87353659 87354797 + 1.28301964271737 NA promoter-TSS (NM_001159331) promoter-TSS (NM_001159331) 43 NM_026366 67768 Mm.296532 NM_026366 ENSMUSG00000044442 N6amt1 5830445C04Rik|Hemk2|Pred28 N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding common_peak1_84_538_0.177500385099986_9.1628916553025_1.28224118787592-2 chr18 80933413 80934192 + 1.28224118787592 NA intron (NM_001201569, intron 1 of 29) CpG 256 NM_001201569 50771 Mm.247138 NM_015805 ENSMUSG00000024566 Atp9b AA934181|Atpc2b|IIb|MMR ATPase, class II, type 9B protein-coding common_peak1_84_538_0.177500385099986_9.1628916553025_1.28224118787592 chr11 21175977 21177271 + 1.28224118787592 NA Intergenic A-rich|Low_complexity|Low_complexity -62408 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding unique_peak2_16_115_-0.4544447341534_6.63075862805087_1.28189032204421 chr1 36444757 36445354 + 1.28189032204421 NA exon (NM_001013374, exon 1 of 8) exon (NM_001013374, exon 1 of 8) 216 NM_001310517 214895 Mm.287854 NM_001013374 ENSMUSG00000001143 Lman2l A630028F14Rik|VIP36-like|VIPL lectin, mannose-binding 2-like protein-coding common_peak1_16_115_-0.4544447341534_6.63075862805087_1.28189032204421 chr7 28597821 28598196 + 1.28189032204421 NA intron (NM_027470, intron 1 of 9) CpG 176 NM_027470 70584 Mm.21876 NM_027470 ENSMUSG00000030602 Pak4 5730488L07Rik|AW555722|mKIAA1142 p21 protein (Cdc42/Rac)-activated kinase 4 protein-coding unique_peak2_16_115_-0.4544447341534_6.63075862805087_1.28189032204421-2 chr15 76009331 76010036 + 1.28189032204421 NA promoter-TSS (NM_001168253) promoter-TSS (NM_001168253) -185 NM_001168253 105732 Mm.267178 NM_134087 ENSMUSG00000046761 Fam83h AA409316 family with sequence similarity 83, member H protein-coding common_peak1_16_115_-0.4544447341534_6.63075862805087_1.28189032204421-2 chrX 150458881 150459306 + 1.28189032204421 NA promoter-TSS (NM_001164683) promoter-TSS (NM_001164683) 57 NM_001164683 382245 Mm.277309 NM_001164683 ENSMUSG00000041353 Tmem29 2700081K05Rik|6330540D07Rik|CXorf44-like transmembrane protein 29 protein-coding common_peak1_196_1587_0.106111419482342_10.6860509068841_1.28184248317163 chr11 21091149 21092457 + 1.28184248317163 NA intron (NM_023324, intron 1 of 6) CpG 479 NM_023324 67245 Mm.28957 NM_023324 ENSMUSG00000020134 Peli1 2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e pellino 1 protein-coding common_peak1_15_108_-0.471931061651758_6.53221879395105_1.28156456703858 chr11 69795603 69796005 + 1.28156456703858 NA TTS (NM_010198) TTS (NM_010198) 133 NM_009601 11443 Mm.86425 NM_009601 ENSMUSG00000041189 Chrnb1 Achr-2|Acrb cholinergic receptor, nicotinic, beta polypeptide 1 (muscle) protein-coding common_peak1_15_108_-0.471931061651758_6.53221879395105_1.28156456703858-2 chr14 55557185 55557604 + 1.28156456703858 NA Intergenic Intergenic -2635 NR_037572 28199 Mm.11535 NM_133734 ENSMUSG00000022214 Dcaf11 0710008A13Rik|C76035|D14Ucla1|Dacf11|GLO14|Wdr23 DDB1 and CUL4 associated factor 11 protein-coding unique_peak2_15_108_-0.471931061651758_6.53221879395105_1.28156456703858 chr14 34316964 34317752 + 1.28156456703858 NA intron (NM_008133, intron 1 of 12) ID4|SINE|ID 6631 NM_008133 14661 Mm.10600 NM_008133 ENSMUSG00000021794 Glud1 AI118167|Gdh-X|Glud|Gludl glutamate dehydrogenase 1 protein-coding common_peak2_67_531_-0.198521552154306_8.95602165942404_1.28144401105307 chr14 103468710 103470349 + 1.28144401105307 NA Intergenic Intergenic -43812 NM_022886 64929 Mm.244003 NM_022886 ENSMUSG00000022123 Scel 9230114I02Rik sciellin protein-coding common_peak2_160_1446_-0.116852293172746_10.4404230599454_1.28111356771488 chrX 77509340 77512926 + 1.28111356771488 NA promoter-TSS (NM_020601) promoter-TSS (NM_020601) -94 NM_020601 21372 Mm.258476 NM_020601 ENSMUSG00000025246 Tbl1x 5330429M20|Tbl1 transducin (beta)-like 1 X-linked protein-coding common_peak1_50_274_0.244382968715435_8.22547929276974_1.28086899880094 chr8 107056861 107057645 + 1.28086899880094 NA promoter-TSS (NM_139229) promoter-TSS (NM_139229) 376 NR_028367 66164 Mm.334789 NM_025391 ENSMUSG00000031917 Nip7 1110017C15Rik|6330509M23Rik|AA408773|AA410017|PEachy NIP7, nucleolar pre-rRNA processing protein protein-coding common_peak1_262_2290_0.0886792759707866_11.2061013812901_1.28059984803202 chr9 80066522 80068575 + 1.28059984803202 NA exon (NM_146003, exon 1 of 23) exon (NM_146003, exon 1 of 23) 645 NM_146003 215351 Mm.28232 NM_146003 ENSMUSG00000034252 Senp6 2810017C20Rik|E130319N12Rik|Susp1|mKIAA0797 SUMO/sentrin specific peptidase 6 protein-coding common_peak1_39_291_-0.272078020062885_8.05378554884858_1.28059363556651 chr16 91044643 91045152 + 1.28059363556651 NA promoter-TSS (NM_026110) promoter-TSS (NM_026110) -518 NM_026110 67367 Mm.347 NM_026110 ENSMUSG00000022974 Paxbp1 1810007M14Rik|C21orf66|Gcfc|Gcfc1|Pax3/7bp PAX3 and PAX7 binding protein 1 protein-coding common_peak1_114_796_0.148130476981358_9.71250115248115_1.28037707788223 chr5 21262746 21264282 + 1.28037707788223 NA intron (NM_175437, intron 19 of 30) AT_rich|Low_complexity|Low_complexity 77247 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_35_258_-0.285510614627531_7.87405298037279_1.28022138335658 chr5 86071771 86072308 + 1.28022138335658 NA intron (NM_001310639, intron 1 of 7) intron (NM_001310639, intron 1 of 7) 293 NM_001310639 56792 Mm.131237 NM_019992 ENSMUSG00000029254 Stap1 AI586015|Brdg1|STAP-1 signal transducing adaptor family member 1 protein-coding common_peak2_87_714_-0.168777066599089_9.39741089836621_1.28018543435995 chr7 90455951 90458018 + 1.28018543435995 NA intron (NM_025460, intron 1 of 4) intron (NM_025460, intron 1 of 4) 224 NM_025460 66271 Mm.28963 NM_025460 ENSMUSG00000030615 Tmem126a 1810020E01Rik transmembrane protein 126A protein-coding common_peak1_68_409_0.203115220741349_8.78103770987612_1.28013719490897 chr6 30509008 30509794 + 1.28013719490897 NA promoter-TSS (NM_027073) promoter-TSS (NM_027073) 382 NM_178625 72649 Mm.45418 NM_178625 ENSMUSG00000029782 Tmem209 2700094F01Rik|AI428435 transmembrane protein 209 protein-coding common_peak1_37_184_0.295595054066935_7.67917898754978_1.27971843908948-2 chr17 25227581 25228374 + 1.27971843908948 NA intron (NM_028789, intron 1 of 4) intron (NM_028789, intron 1 of 4) 5395 NM_028789 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding common_peak2_31_227_-0.310024439853217_7.67787779423813_1.27971843908948 chr2 150749918 150751201 + 1.27971843908948 NA intron (NM_172117, intron 1 of 13) intron (NM_172117, intron 1 of 13) 1478 NM_172117 12497 Mm.275524 NM_172117 ENSMUSG00000033068 Entpd6 2700026H11Rik|Cd39l2|NTPDase-6 ectonucleoside triphosphate diphosphohydrolase 6 protein-coding common_peak1_37_184_0.295595054066935_7.67917898754978_1.27971843908948 chr15 52749168 52749879 + 1.27971843908948 NA Intergenic Intergenic 37078 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak2_37_184_0.295595054066935_7.67917898754978_1.27971843908948-2 chr16 32867664 32868583 + 1.27971843908948 NA exon (NM_172615, exon 1 of 19) exon (NM_172615, exon 1 of 19) 243 NM_001200038 100502698 Mm.327319 NM_172615 ENSMUSG00000035629 Rubcn 1700021K19Rik|5330403K09|Kiaa0226|Rubicon|mKIAA0226 RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein protein-coding common_peak2_37_184_0.295595054066935_7.67917898754978_1.27971843908948 chr15 34494661 34495920 + 1.27971843908948 NA promoter-TSS (NM_008287) promoter-TSS (NM_008287) -21 NM_026340 67724 Mm.248779 NM_026340 ENSMUSG00000022325 Pop1 4932434G09Rik processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) protein-coding common_peak2_88_571_0.173147031985799_9.24644485277129_1.27951134814513 chr5 146781112 146783854 + 1.27951134814513 NA intron (NM_011669, intron 1 of 8) PB1D10|SINE|Alu 12473 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak1_88_571_0.173147031985799_9.24644485277129_1.27951134814513 chr6 128362240 128363135 + 1.27951134814513 NA promoter-TSS (NM_008021) promoter-TSS (NM_008021) 135 NR_027360 72440 Mm.143908 NM_197981 ENSMUSG00000048668 Rhno1 2510047L19Rik|5930416I19Rik RAD9-HUS1-RAD1 interacting nuclear orphan 1 protein-coding unique_peak2_63_370_0.214202508877078_8.64237663105934_1.27911073730419 chr3 104775473 104777834 + 1.27911073730419 NA intron (NM_183224, intron 1 of 6) intron (NM_183224, intron 1 of 6) 894 NM_183224 329731 Mm.389494 NM_183224 ENSMUSG00000055865 Fam19a3 7530404M11Rik|TAFA3|Tafa-3 family with sequence similarity 19, member A3 protein-coding unique_peak2_33_158_0.317265616876171_7.47151576372244_1.27903658427966 chr14 25780166 25781456 + 1.27903658427966 NA Intergenic Lx8|LINE|L1 -11955 NM_001101433 71918 Mm.41904 NM_001101433 ENSMUSG00000055538 Zcchc24 2310047A01Rik zinc finger, CCHC domain containing 24 protein-coding common_peak1_76_612_-0.183021722917715_9.16823240223192_1.27882974960997 chr3 89730501 89731347 + 1.27882974960997 NA intron (NM_001146296, intron 1 of 14) intron (NM_001146296, intron 1 of 14) 206 NM_019655 56417 Mm.316628 NM_019655 ENSMUSG00000027951 Adar AV242451|Adar1|Adar1p110|Adar1p150|mZaADAR adenosine deaminase, RNA-specific protein-coding common_peak2_89_733_-0.166845304092226_9.4362136007971_1.27864328897773 chr2 73345234 73347627 + 1.27864328897773 NA intron (NM_001276443, intron 16 of 16) intron (NM_001276443, intron 16 of 16) 33778 NM_029022 74616 Mm.247457 NM_029022 ENSMUSG00000008226 Scrn3 4833415E20Rik|AI427019|AV002033|Ses3 secernin 3 protein-coding common_peak1_58_333_0.221822112567773_8.49461534875794_1.27785441471567 chr17 25225695 25226658 + 1.27785441471567 NA intron (NM_028789, intron 1 of 4) intron (NM_028789, intron 1 of 4) 3594 NM_028789 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding common_peak2_198_1858_-0.103329261072064_10.8086464243835_1.27709551186548 chr8 94411673 94416277 + 1.27709551186548 NA Intergenic Intergenic 21128 NR_015514 320377 Mm.486022 NR_015514 9330175E14Rik A630085K21 RIKEN cDNA 9330175E14 gene ncRNA common_peak2_435_4733_-0.0638771328322658_12.1769054243185_1.27679445035498 chr7 128235258 128239311 + 1.27679445035498 NA promoter-TSS (NM_146205) promoter-TSS (NM_146205) -73 NM_146205 233912 Mm.475117 NM_146205 ENSMUSG00000042178 Armc5 AW049683|BC032200 armadillo repeat containing 5 protein-coding common_peak2_135_1186_-0.129731025108665_10.1482387070876_1.27674545327803 chr16 91043448 91045423 + 1.27674545327803 NA promoter-TSS (NM_026110) promoter-TSS (NM_026110) -56 NM_026110 67367 Mm.347 NM_026110 ENSMUSG00000022974 Paxbp1 1810007M14Rik|C21orf66|Gcfc|Gcfc1|Pax3/7bp PAX3 and PAX7 binding protein 1 protein-coding common_peak1_93_771_-0.162713638655704_9.51110021794023_1.27668626672636 chr5 112285429 112286958 + 1.27668626672636 NA intron (NM_009419, intron 1 of 6) B2_Mm2|SINE|B2 9486 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_78_630_-0.179397103869233_9.21179764304793_1.27652131723302 chr4 88002559 88004370 + 1.27652131723302 NA intron (NM_027326, intron 2 of 10) intron (NM_027326, intron 2 of 10) 29943 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak2_104_708_0.155938413437303_9.54761102395817_1.2762156456682 chr2 174075685 174078429 + 1.2762156456682 NA promoter-TSS (NM_001102423) promoter-TSS (NM_001102423) 6 NM_001102423 228960 Mm.277977 NM_172675 ENSMUSG00000027522 Stx16 4930401D03|5430410K23Rik|6330500A18Rik|AI648908|AW553605|Syn16 syntaxin 16 protein-coding common_peak1_250_2447_-0.0895903618786527_11.2125926617533_1.27605954706003 chr1 127303020 127306992 + 1.27605954706003 NA intron (NM_145128, intron 2 of 17) intron (NM_145128, intron 2 of 17) 100020 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding unique_peak2_8_60_-0.652664286876575_5.6044051941246_1.27570999829275 chr1 52004309 52004818 + 1.27570999829275 NA intron (NM_001308266, intron 2 of 24) intron (NM_001308266, intron 2 of 24) -3677 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 protein-coding common_peak1_51_391_-0.232676288287919_8.49837169997125_1.2751541449264 chr11 121259286 121259983 + 1.2751541449264 NA promoter-TSS (NM_001080932) promoter-TSS (NM_001080932) -353 NM_001080932 68837 Mm.209750 NM_001080932 ENSMUSG00000039275 Foxk2 1110054H05Rik|5730434B08Rik|6230415M23Rik|ILF|Ilf1 forkhead box K2 protein-coding common_peak2_22_92_0.399301992985479_6.73880980760077_1.27501900440189-3 chr5 30736811 30737606 + 1.27501900440189 NA intron (NM_023047, intron 1 of 12) intron (NM_023047, intron 1 of 12) 25313 NM_023047 65254 Mm.27732 NM_023047 ENSMUSG00000029168 Dpysl5 CRAM|CRMP-5|Crmp5 dihydropyrimidinase-like 5 protein-coding unique_peak2_22_92_0.399301992985479_6.73880980760077_1.27501900440189 chr3 135528019 135528821 + 1.27501900440189 NA intron (NM_027288, intron 7 of 16) intron (NM_027288, intron 7 of 16) 42809 NM_027288 110173 Mm.280536 NM_027288 ENSMUSG00000028164 Manba 2410030O07Rik|B930014J03Rik|Bmn mannosidase, beta A, lysosomal protein-coding common_peak1_22_92_0.399301992985479_6.73880980760077_1.27501900440189-2 chr8 25130449 25130933 + 1.27501900440189 NA Intergenic MMERGLN_LTR|LTR|ERV1 28542 NR_106187 102467006 NR_106187 ENSMUSG00000099142 Mir8108 Gm27484|mmu-mir-8108 microRNA 8108 ncRNA unique_peak2_22_92_0.399301992985479_6.73880980760077_1.27501900440189-2 chr8 120831803 120832742 + 1.27501900440189 NA Intergenic Intergenic 93633 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_22_92_0.399301992985479_6.73880980760077_1.27501900440189 chr3 104638071 104638606 + 1.27501900440189 NA promoter-TSS (NM_009196) promoter-TSS (NM_009196) -326 NM_009196 20501 Mm.9086 NM_009196 ENSMUSG00000032902 Slc16a1 AL022710|Mct1 solute carrier family 16 (monocarboxylic acid transporters), member 1 protein-coding common_peak2_22_92_0.399301992985479_6.73880980760077_1.27501900440189-2 chr17 72977747 72978491 + 1.27501900440189 NA Intergenic Intergenic 59814 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_22_92_0.399301992985479_6.73880980760077_1.27501900440189 chr11 58914302 58915001 + 1.27501900440189 NA Intergenic Intergenic -3406 NM_138678 192194 Mm.22540 NM_138678 ENSMUSG00000020490 Btnl10 BUTR-1|Butr1 butyrophilin-like 10 protein-coding common_peak1_59_460_-0.213354196645279_8.7419458421067_1.27473856002224 chr10 78304671 78305839 + 1.27473856002224 NA intron (NM_053014, intron 2 of 9) intron (NM_053014, intron 2 of 9) 34952 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA common_peak1_162_1247_0.118442225059121_10.3446233313918_1.27471684028466 chr4 45319798 45321024 + 1.27471684028466 NA exon (NM_025513, exon 1 of 4) exon (NM_025513, exon 1 of 4) 192 NM_025513 66362 Mm.275788 NM_025513 ENSMUSG00000028322 Exosc3 2310005D06Rik|AI593501|Rrp40 exosome component 3 protein-coding common_peak2_209_1980_-0.0998206230263108_10.9021028533763_1.27444109889495 chr9 96888403 96890898 + 1.27444109889495 NA promoter-TSS (NM_153420) promoter-TSS (NM_153420) -176 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding common_peak1_290_2603_0.0829591463510582_11.3879933063412_1.27429795799324 chr7 44847826 44850721 + 1.27429795799324 NA promoter-TSS (NM_001253920) promoter-TSS (NM_001253920) 49 NM_026270 67605 Mm.148007 NM_026270 ENSMUSG00000011096 Akt1s1 1110012J22Rik|AI227026|Lobe|Lobel|PRAS40 AKT1 substrate 1 (proline-rich) protein-coding common_peak1_11_35_0.617238155463427_5.47854407917403_1.27423323032613 chr6 38349642 38350035 + 1.27423323032613 NA intron (NM_028864, intron 1 of 8) intron (NM_028864, intron 1 of 8) 4765 NM_028864 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding unique_peak1_11_35_0.617238155463427_5.47854407917403_1.27423323032613 chr14 61309708 61310070 + 1.27423323032613 NA 5' UTR (NM_177337, exon 1 of 2) 5' UTR (NM_177337, exon 1 of 2) 136 NM_177337 219144 Mm.206566 NM_177337 ENSMUSG00000043157 Arl11 ARLTS1|C730007L20Rik ADP-ribosylation factor-like 11 protein-coding common_peak2_249_2148_0.0912833227732772_11.1150914288144_1.27417202853327 chr13 51644008 51646834 + 1.27417202853327 NA exon (NM_025415, exon 1 of 3) exon (NM_025415, exon 1 of 3) 189 NM_025415 66197 Mm.222228 NM_025415 ENSMUSG00000062248 Cks2 1110038L14Rik|CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding common_peak1_28_127_0.348663314512568_7.17433165725628_1.27396142677296 chr13 64370438 64370956 + 1.27396142677296 NA promoter-TSS (NM_009984) promoter-TSS (NM_009984) -177 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding common_peak2_28_127_0.348663314512568_7.17433165725628_1.27396142677296 chr13 44607312 44608226 + 1.27396142677296 NA Intergenic Intergenic -123005 NM_021878 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding unique_peak2_28_127_0.348663314512568_7.17433165725628_1.27396142677296 chr16 55906750 55907799 + 1.27396142677296 NA intron (NM_028815, intron 10 of 10) intron (NM_028815, intron 10 of 10) -11995 NM_001134457 385658 Mm.310635 NM_001134457 ENSMUSG00000075033 Nxpe3 Fam55c|Gm1752|Gm611 neurexophilin and PC-esterase domain family, member 3 protein-coding common_peak1_28_127_0.348663314512568_7.17433165725628_1.27396142677296-2 chr18 89197387 89198046 + 1.27396142677296 NA intron (NM_178687, intron 1 of 6) intron (NM_178687, intron 1 of 6) 289 NM_001039149 225825 Mm.139293 NM_178687 ENSMUSG00000034028 Cd226 BC051526|DNAM-1|DNAM1|Pta1|TLiSA1 CD226 antigen protein-coding common_peak1_592_6363_0.0535014894123105_12.6624688650372_1.27371875135261 chr4 129569334 129574746 + 1.27371875135261 NA intron (NM_001162433, intron 1 of 12) intron (NM_001162433, intron 1 of 12) 1601 NM_001162433 16818 Mm.293753 NM_010693 ENSMUSG00000000409 Lck Hck-3|Lsk|Lskt|p56|p56Lck lymphocyte protein tyrosine kinase protein-coding common_peak1_40_204_0.281963165559979_7.82046168228544_1.27332410135619 chr8 110618586 110619231 + 1.27332410135619 NA exon (NM_146216, exon 1 of 19) exon (NM_146216, exon 1 of 19) 270 NM_146216 234729 Mm.274894 NM_146216 ENSMUSG00000010936 Vac14 AA959718|BC032215|D8Wsu151e|Tax1bp2|Trx|ingls Vac14 homolog (S. cerevisiae) protein-coding common_peak1_132_961_0.134007228892319_9.9768966982162_1.27300772110834 chr4 152476864 152478587 + 1.27300772110834 NA promoter-TSS (NM_001252654) promoter-TSS (NM_001252654) -176 NM_010598 16498 Mm.388924 NM_010598 ENSMUSG00000028931 Kcnab2 F5|I2rf5|Kcnb3|kv-beta-2 potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein-coding common_peak1_21_86_0.416854246845223_6.65137061927134_1.27210604883946-2 chr11 49055009 49055557 + 1.27210604883946 NA intron (NM_010999, intron 1 of 5) intron (NM_010999, intron 1 of 5) -4041 NM_173434 245240 Mm.452996 NM_173434 ENSMUSG00000069892 9930111J21Rik2 9930111J21Rik|Irgb5|OTTMUSG00000005540 RIKEN cDNA 9930111J21 gene 2 protein-coding common_peak2_21_86_0.416854246845223_6.65137061927134_1.27210604883946 chr7 106641116 106641896 + 1.27210604883946 NA intron (NM_001277182, intron 1 of 3) BGLII_Mus|LTR|ERVK 3139 NM_001277179 434223 Mm.276443 NM_001277179 Gm1966 - predicted gene 1966 protein-coding common_peak1_21_86_0.416854246845223_6.65137061927134_1.27210604883946-4 chr4 124753216 124753690 + 1.27210604883946 NA intron (NR_126474, intron 7 of 24) intron (NR_126474, intron 7 of 24) 9672 NR_030480 735263 NR_030480 ENSMUSG00000076119 Mir698 Mirn698|mir-698|mmu-mir-698 microRNA 698 ncRNA common_peak1_21_86_0.416854246845223_6.65137061927134_1.27210604883946-5 chr8 88297894 88298362 + 1.27210604883946 NA intron (NM_001037724, intron 3 of 27) intron (NM_001037724, intron 3 of 27) 3924 NM_001037724 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding unique_peak2_21_86_0.416854246845223_6.65137061927134_1.27210604883946-2 chr8 74980154 74980939 + 1.27210604883946 NA Intergenic Intergenic -13104 NM_001316753 70823 Mm.261739 NM_178017 ENSMUSG00000034518 Hmgxb4 4733401K04Rik|AI316803|Hmgb2l1 HMG box domain containing 4 protein-coding unique_peak2_21_86_0.416854246845223_6.65137061927134_1.27210604883946 chr5 20940593 20941303 + 1.27210604883946 NA intron (NM_001080977, intron 1 of 7) intron (NM_001080977, intron 1 of 7) -10041 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak1_21_86_0.416854246845223_6.65137061927134_1.27210604883946-3 chr12 112821749 112822279 + 1.27210604883946 NA exon (NM_028023, exon 2 of 2) exon (NM_028023, exon 2 of 2) 7375 NM_028023 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding common_peak1_21_86_0.416854246845223_6.65137061927134_1.27210604883946 chr11 34010545 34010987 + 1.27210604883946 NA Intergenic Intergenic -17573 NM_001190886 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding common_peak1_38_282_-0.271714793224022_8.00880084621987_1.27202089867043 chr10 59589659 59590499 + 1.27202089867043 NA intron (NM_001033259, intron 1 of 7) MLT1N2|LTR|ERVL-MaLR 26613 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak2_52_288_0.240816082942434_8.2953337239719_1.27192099433416-2 chr16 50736357 50737581 + 1.27192099433416 NA Intergenic Intergenic -4196 NR_028300 68190 Mm.139089 NR_028300 Dubr 5330426P16Rik|Dum Dppa2 upstream binding RNA ncRNA common_peak2_52_288_0.240816082942434_8.2953337239719_1.27192099433416 chr15 67086930 67088355 + 1.27192099433416 NA Intergenic MLT1G3|LTR|ERVL-MaLR 89240 NM_009177 20442 Mm.248334 NM_009177 ENSMUSG00000013846 St3gal1 5330418N22Rik|AI467004|ST3GalI|Siat4|Siat4a|St3gal-1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding common_peak2_56_433_-0.217052512894305_8.65302497599733_1.2718161915777 chr7 139387992 139388829 + 1.2718161915777 NA promoter-TSS (NM_183144) promoter-TSS (NM_183144) -699 NM_183144 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding common_peak1_119_842_0.142492234028333_9.79063493795625_1.27155812381044 chr11 58938169 58939179 + 1.27155812381044 NA exon (NM_022423, exon 1 of 4) exon (NM_022423, exon 1 of 4) 232 NM_022423 108660 Mm.249986 NM_022423 ENSMUSG00000020496 Rnf187 2410016F01Rik|AB030190|RACO-1 ring finger protein 187 protein-coding common_peak1_25_181_-0.352373395557764_7.33160794241981_1.2710406926778 chr16 30008813 30009454 + 1.2710406926778 NA intron (NR_033631, intron 1 of 2) CpG 466 NR_033631 100043102 Mm.30797 NR_033631 ENSMUSG00000097184 4632428C04Rik Gm4231 RIKEN cDNA 4632428C04 gene ncRNA unique_peak2_25_181_-0.352373395557764_7.33160794241981_1.2710406926778 chr7 75415525 75416948 + 1.2710406926778 NA Intergenic Intergenic -39298 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak2_215_2047_-0.097955499601337_10.9510222501993_1.27094659317589 chr5 135933319 135935633 + 1.27094659317589 NA 5' UTR (NM_018871, exon 1 of 2) 5' UTR (NM_018871, exon 1 of 2) 165 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak1_60_348_0.21743622483732_8.55580133862831_1.27079846624702 chr11 103103014 103103901 + 1.27079846624702 NA intron (NM_025988, intron 2 of 9) intron (NM_025988, intron 2 of 9) 1769 NM_025988 67131 Mm.390367 NM_025988 ENSMUSG00000056938 Acbd4 2010009P05Rik|2010015A21Rik|AI849317 acyl-Coenzyme A binding domain containing 4 protein-coding common_peak2_73_584_-0.185896852073_9.09934438843427_1.27074166667606 chr17 21383281 21384515 + 1.27074166667606 NA 5' UTR (NM_172486, exon 1 of 4) 5' UTR (NM_172486, exon 1 of 4) 150 NM_172486 210503 Mm.33443 NM_172486 ENSMUSG00000062743 Zfp677 A830058L05Rik|Tce8 zinc finger protein 677 protein-coding common_peak2_114_974_-0.142692017665143_9.8579123998044_1.26975195766924 chr5 29568593 29570479 + 1.26975195766924 NA exon (NM_133907, exon 1 of 23) exon (NM_133907, exon 1 of 23) 294 NM_133907 100763 Mm.137746 NM_133907 ENSMUSG00000039000 Ube3c AI853514|mKIAA0010 ubiquitin protein ligase E3C protein-coding common_peak1_202_1901_-0.101102107082525_10.8427504773193_1.26958210976075 chr1 133815151 133817655 + 1.26958210976075 NA Intergenic Intergenic -62656 NM_213616 381290 Mm.188617 NM_213616 ENSMUSG00000026463 Atp2b4 Pmca4 ATPase, Ca++ transporting, plasma membrane 4 protein-coding common_peak2_152_1362_-0.12076455352447_10.352187570043_1.2695030063125 chr9 20951175 20953625 + 1.2695030063125 NA 5' UTR (NM_001199433, exon 1 of 39) 5' UTR (NM_001199433, exon 1 of 39) 223 NM_001199433 13433 Mm.128580 NM_010066 ENSMUSG00000004099 Dnmt1 Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI DNA methyltransferase (cytosine-5) 1 protein-coding common_peak2_61_477_-0.207572292060085_8.79708066195071_1.26912986160237 chr18 67279883 67281709 + 1.26912986160237 NA Intergenic (A)n|Simple_repeat|Simple_repeat -8427 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak1_34_250_-0.290097839427238_7.82649463423715_1.26903622822828 chr6 54715143 54715833 + 1.26903622822828 NA Intergenic Intergenic 33864 NM_001289740 68235 Mm.233860 NM_026629 ENSMUSG00000038065 Mturn 2410066E13Rik|AI448550|B230212L03Rik maturin, neural progenitor differentiation regulator homolog (Xenopus) protein-coding common_peak1_34_250_-0.290097839427238_7.82649463423715_1.26903622822828-2 chr8 72219161 72219685 + 1.26903622822828 NA promoter-TSS (NM_026455) promoter-TSS (NM_026455) -307 NM_026455 67922 Mm.28327 NM_026455 ENSMUSG00000003039 Fam32a 2510049I19Rik|AW822030|OTAG-12|Otag12 family with sequence similarity 32, member A protein-coding unique_peak2_34_250_-0.290097839427238_7.82649463423715_1.26903622822828 chrX 106015144 106016377 + 1.26903622822828 NA promoter-TSS (NM_025379) promoter-TSS (NM_025379) 60 NM_025379 66142 Mm.197728 NM_025379 ENSMUSG00000031231 Cox7b 1100001F07Rik|1110004F07Rik|C80563 cytochrome c oxidase subunit VIIb protein-coding common_peak2_113_788_0.147229540723073_9.69749626037499_1.26777997070901 chr12 76403172 76404954 + 1.26777997070901 NA promoter-TSS (NM_001002012) promoter-TSS (NM_001002012) -113 NM_001002012 15512 Mm.296181 NM_008301 ENSMUSG00000059970 Hspa2 70kDa|HSP70.2|HSP70A2|Hsp70-2 heat shock protein 2 protein-coding unique_peak2_49_267_0.246538312864969_8.18935834689026_1.26772674040853 chr1 120244842 120246819 + 1.26772674040853 NA intron (NM_001085409, intron 2 of 5) intron (NM_001085409, intron 2 of 5) 19450 NM_133186 68428 Mm.181033 NM_133186 ENSMUSG00000026389 Steap3 1010001D01Rik|Tsap6|pHyde STEAP family member 3 protein-coding common_peak1_43_225_0.266231091465119_7.95329450814775_1.26762111255506 chr6 86487123 86487970 + 1.26762111255506 NA intron (NR_040292, intron 1 of 1) intron (NR_040292, intron 1 of 1) 681 NR_040293 381792 Mm.333223 NR_040292 ENSMUSG00000101655 2310040G24Rik - RIKEN cDNA 2310040G24 gene ncRNA common_peak2_188_1506_0.108279974507242_10.6116036888514_1.26725197772635 chr14 54252853 54254913 + 1.26725197772635 NA promoter-TSS (NM_001113358) promoter-TSS (NM_001113358) 46 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_151_1141_0.122854201593114_10.2187740361594_1.26724874473703 chr19 47578837 47580830 + 1.26724874473703 NA promoter-TSS (NM_001164639) promoter-TSS (NM_001164639) -186 NM_009289 20874 Mm.281011 NM_009289 ENSMUSG00000025060 Slk 9A2|AV021402|AW411554|Etk4|SMAK|Stk2|mKIAA0204|mSLK STE20-like kinase protein-coding common_peak2_74_457_0.190945920192723_8.9346767481933_1.26695827722664 chr8 122322231 122324249 + 1.26695827722664 NA intron (NM_009569, intron 3 of 9) intron (NM_009569, intron 3 of 9) 37506 NM_133202 170732 Mm.154808 NM_133202 ENSMUSG00000039079 Trhr2 TRH-R2 thyrotropin releasing hormone receptor 2 protein-coding common_peak2_111_770_0.149202322475603_9.66518821115284_1.26694078833025 chr15 93335532 93337855 + 1.26694078833025 NA intron (NM_024189, intron 1 of 3) CpG-5264 242 NR_028315 67057 Mm.4714 NM_024189 ENSMUSG00000022634 Yaf2 2810021M11Rik YY1 associated factor 2 protein-coding common_peak1_57_325_0.226547471467848_8.462001889965_1.26659604240627 chr1 91540540 91541530 + 1.26659604240627 NA promoter-TSS (NM_023046) promoter-TSS (NM_023046) -45 NM_023046 65247 Mm.234152 NM_023046 ENSMUSG00000026311 Asb1 1700029O08Rik|1700054C17Rik|AI426616|AI851378|mKIAA1146 ankyrin repeat and SOCS box-containing 1 protein-coding common_peak2_238_2307_-0.0913229945529039_11.126766011369_1.26633729314803 chr3 35754028 35756963 + 1.26633729314803 NA intron (NM_029570, intron 1 of 29) intron (NM_029570, intron 1 of 29) 1357 NM_029570 76295 Mm.239416 NM_029570 ENSMUSG00000037400 Atp11b 1110019I14Rik|ATPIF|ATPIR|mKIAA0956 ATPase, class VI, type 11B protein-coding common_peak2_183_1456_0.109512575588067_10.5635414498585_1.26623752317527 chr1 79760483 79763544 + 1.26623752317527 NA promoter-TSS (NM_027057) promoter-TSS (NM_027057) -244 NM_027057 69368 Mm.293273 NM_027057 ENSMUSG00000073643 Wdfy1 1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435 WD repeat and FYVE domain containing 1 protein-coding common_peak2_295_2660_0.0818677897482587_11.4186866898963_1.26618892033727 chr1 180362391 180367689 + 1.26618892033727 NA intron (NM_001081175, intron 2 of 7) (GAAA)n|Simple_repeat|Simple_repeat -34491 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_271_2391_0.0859838315214905_11.2669935899589_1.26596059354058 chr2 91081790 91084603 + 1.26596059354058 NA Intergenic Intergenic -12881 NM_001290765 68427 Mm.192375 NM_026721 ENSMUSG00000002105 Slc39a13 1100001L14Rik|AA387663|ZIP-13|ZIP13 solute carrier family 39 (metal ion transporter), member 13 protein-coding common_peak2_68_539_-0.194220276804037_8.97970545864881_1.2659051003884 chr1 171246498 171247922 + 1.2659051003884 NA promoter-TSS (NM_153064) promoter-TSS (NM_153064) -88 NM_153064 226646 Mm.21669 NM_153064 ENSMUSG00000013593 Ndufs2 CI-49kD NADH dehydrogenase (ubiquinone) Fe-S protein 2 protein-coding common_peak2_124_887_0.139704912664598_9.8642683226824_1.26559327212773 chr8 83720689 83724038 + 1.26559327212773 NA TTS (NM_001163029) TTS (NM_001163029) 1621 NR_106188 102465897 NR_106188 ENSMUSG00000098465 Mir1668 Gm27590|mmu-mir-1668 microRNA 1668 ncRNA common_peak1_24_173_-0.356928303712344_7.26447934399256_1.26539589319142-2 chr11 96318217 96318579 + 1.26539589319142 NA 5' UTR (NM_010459, exon 1 of 2) 5' UTR (NM_010459, exon 1 of 2) 131 NM_010459 15412 Mm.3546 NM_010459 ENSMUSG00000038692 Hoxb4 Hox-2.6 homeobox B4 protein-coding common_peak1_24_173_-0.356928303712344_7.26447934399256_1.26539589319142 chr11 94989278 94989859 + 1.26539589319142 NA Intergenic Intergenic -1644 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding common_peak1_36_178_0.295967873947154_7.63179971423783_1.26525577646929-3 chr9 53786737 53787444 + 1.26525577646929 NA intron (NM_028060, intron 1 of 7) intron (NM_028060, intron 1 of 7) 15555 NM_028060 72022 Mm.26159 NM_028060 ENSMUSG00000042195 Slc35f2 1500009K05Rik|AU019213 solute carrier family 35, member F2 protein-coding common_peak2_36_178_0.295967873947154_7.63179971423783_1.26525577646929 chr14 63859825 63860981 + 1.26525577646929 NA promoter-TSS (NM_028228) promoter-TSS (NM_028228) 91 NM_028228 72400 Mm.379214 NM_028228 ENSMUSG00000021958 Pinx1 2210403I16Rik|2610028A01Rik|67-11-3|AU024023|LPTS|LPTS1 PIN2/TERF1 interacting, telomerase inhibitor 1 protein-coding common_peak1_36_178_0.295967873947154_7.63179971423783_1.26525577646929-2 chr18 39020486 39021409 + 1.26525577646929 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 27802 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_36_178_0.295967873947154_7.63179971423783_1.26525577646929 chr12 112678693 112679271 + 1.26525577646929 NA intron (NM_001100460, intron 1 of 1) CpG 142 NM_001100460 382639 Mm.11350 NM_001100460 ENSMUSG00000037638 Zbtb42 EG382639|Gm5188|simiRP58 zinc finger and BTB domain containing 42 protein-coding common_peak1_100_837_-0.153958240093894_9.6338273136524_1.26512085136255 chr2 164520639 164521861 + 1.26512085136255 NA Intergenic Lx5b|LINE|L1 23725 NM_133779 78928 Mm.28228 NM_133779 ENSMUSG00000017721 Pigt 2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7 phosphatidylinositol glycan anchor biosynthesis, class T protein-coding common_peak1_41_307_-0.262699585710047_8.13543674783988_1.26482687118296-3 chr5 115279732 115280408 + 1.26482687118296 NA intron (NM_026504, intron 1 of 6) intron (NM_026504, intron 1 of 6) 368 NM_026504 52064 Mm.290142 NM_026504 ENSMUSG00000041733 Coq5 1810014G04Rik|D5Ertd33e coenzyme Q5 methyltransferase protein-coding common_peak1_41_307_-0.262699585710047_8.13543674783988_1.26482687118296-2 chr2 166627643 166628535 + 1.26482687118296 NA intron (NM_177782, intron 5 of 39) intron (NM_177782, intron 5 of 39) -44629 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_41_307_-0.262699585710047_8.13543674783988_1.26482687118296 chr1 64529182 64529970 + 1.26482687118296 NA Intergenic MTD|LTR|ERVL-MaLR -3228 NM_133828 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding common_peak1_41_307_-0.262699585710047_8.13543674783988_1.26482687118296-4 chrX 75061258 75062233 + 1.26482687118296 NA intron (NM_181584, intron 1 of 9) intron (NM_181584, intron 1 of 9) 23160 NM_181584 210710 Mm.267056 NM_181584 ENSMUSG00000032750 Gab3 5930433H21Rik growth factor receptor bound protein 2-associated protein 3 protein-coding common_peak1_142_1055_0.127796227223973_10.1082922329704_1.26480234891388 chr19 9064818 9067122 + 1.26480234891388 NA intron (NM_001286518, intron 6 of 6) MIRb|SINE|MIR 21986 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_44_331_-0.248860793782294_8.25060903445578_1.26476664722094 chr11 96943247 96944104 + 1.26476664722094 NA promoter-TSS (NR_003293) promoter-TSS (NR_003293) 344 NM_134021 103711 Mm.254704 NM_134021 ENSMUSG00000018659 Pnpo AI415282 pyridoxine 5'-phosphate oxidase protein-coding common_peak2_107_735_0.151870233155295_9.59949707263466_1.26473914540069 chr8 94374704 94377447 + 1.26473914540069 NA Intergenic Intergenic -10425 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak1_212_1754_0.100038746808378_10.8272746885961_1.26473858912372 chr11 95687648 95689613 + 1.26473858912372 NA Intergenic Intergenic 21673 NM_008831 18673 Mm.263862 NM_008831 ENSMUSG00000038845 Phb Bap32 prohibitin protein-coding common_peak2_47_356_-0.239392484750647_8.36008402165378_1.26442519598384 chr5 36356422 36358417 + 1.26442519598384 NA intron (NM_030889, intron 1 of 26) IMPB_01|Satellite|Satellite 40720 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding common_peak1_47_356_-0.239392484750647_8.36008402165378_1.26442519598384 chr14 14349039 14350085 + 1.26442519598384 NA intron (NM_008369, intron 5 of 11) intron (NM_008369, intron 5 of 11) 3067 NM_008369 16188 Mm.425857 NM_008369 ENSMUSG00000068758 Il3ra CD123|CDw123|SUT-1 interleukin 3 receptor, alpha chain protein-coding common_peak2_219_2091_-0.0961514954883143_10.9825913885028_1.26442136702465 chr7 44553004 44554832 + 1.26442136702465 NA promoter-TSS (NM_001285517) promoter-TSS (NM_001285517) 47 NM_009473 22260 Mm.968 NM_009473 ENSMUSG00000060601 Nr1h2 AI194859|LXR|LXRB|LXRBSV|LXRbeta|NER1|OR-1|RIP15|UR|Unr|Unr2 nuclear receptor subfamily 1, group H, member 2 protein-coding common_peak1_27_121_0.355827412455039_7.10865104379041_1.26390991532103 chr11 101143735 101144238 + 1.26390991532103 NA Intergenic Intergenic -11898 NM_134028 103768 Mm.142348 NM_134028 ENSMUSG00000045007 Tubg2 AI504772|Tubgl tubulin, gamma 2 protein-coding common_peak2_27_121_0.355827412455039_7.10865104379041_1.26390991532103 chr1 154033839 154034818 + 1.26390991532103 NA Intergenic Intergenic 134399 NM_008131 14645 Mm.210745 NM_008131 ENSMUSG00000026473 Glul GS|Glns glutamate-ammonia ligase (glutamine synthetase) protein-coding common_peak1_27_121_0.355827412455039_7.10865104379041_1.26390991532103-2 chr15 73545478 73546198 + 1.26390991532103 NA intron (NM_001081066, intron 12 of 22) MIRc|SINE|MIR 33278 NM_001081066 105841 Mm.322557 NM_001081066 ENSMUSG00000036661 Dennd3 AI447457|E030003N15Rik DENN/MADD domain containing 3 protein-coding unique_peak2_27_121_0.355827412455039_7.10865104379041_1.26390991532103 chr12 3739786 3740776 + 1.26390991532103 NA intron (NR_027869, intron 12 of 20) intron (NR_027869, intron 12 of 20) -66699 NM_007872 13435 Mm.5001 NM_007872 ENSMUSG00000020661 Dnmt3a MmuIIIA DNA methyltransferase 3A protein-coding common_peak2_348_3624_-0.0726649825253922_11.787432788527_1.26323004394977 chr13 48965333 48969421 + 1.26323004394977 NA promoter-TSS (NR_015601) promoter-TSS (NR_015601) 451 NM_001033268 218236 Mm.426571 NM_001033268 ENSMUSG00000038014 Fam120a C9orf10|Ossa family with sequence similarity 120, member A protein-coding common_peak2_97_648_0.161413880097902_9.42278160804809_1.26306370825387 chr10 59931886 59933993 + 1.26306370825387 NA Intergenic B1F|SINE|Alu 18831 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding unique_peak2_9_66_-0.601567274013353_5.7653055534511_1.26295166245271 chr5 65919514 65919979 + 1.26295166245271 NA Intergenic LTR85a|LTR|Gypsy? -47378 NM_001081104 231252 Mm.140015 NM_001081104 ENSMUSG00000029205 Chrna9 2410015I05Rik|Acra9|EG666827|Gm8311 cholinergic receptor, nicotinic, alpha polypeptide 9 protein-coding unique_peak2_1_2_1.03145382884494_2.10068941514363_1.26211192963361-2 chr2 168131166 168131376 + 1.26211192963361 NA Intergenic B1_Mus1|SINE|Alu 23242 NR_040327 77017 Mm.407822 NR_040327 ENSMUSG00000087648 E130018N17Rik - RIKEN cDNA E130018N17 gene ncRNA unique_peak2_1_2_1.03145382884494_2.10068941514363_1.26211192963361 chr16 50414521 50414735 + 1.26211192963361 NA intron (NM_027444, intron 2 of 16) (GAATG)n|Simple_repeat|Simple_repeat 17761 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding common_peak2_79_639_-0.177569244883873_9.23314347244543_1.26193165892167 chr14 101653460 101654730 + 1.26193165892167 NA exon (NM_016723, exon 1 of 9) exon (NM_016723, exon 1 of 9) 128 NM_016723 50933 Mm.275970 NM_016723 ENSMUSG00000022111 Uchl3 - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) protein-coding common_peak1_70_557_-0.19096176598217_9.0286404288381_1.26163926371217 chr11 120783689 120785025 + 1.26163926371217 NA promoter-TSS (NM_001177874) promoter-TSS (NM_001177874) 85 NM_001177874 209318 Mm.30195 NM_145370 ENSMUSG00000025156 Gps1 Cops1|Csn1|R75577|Sgn1 G protein pathway suppressor 1 protein-coding common_peak1_78_489_0.185461152110745_9.02936851505794_1.26163926371217 chr4 86668886 86670325 + 1.26163926371217 NA intron (NM_007408, intron 1 of 7) B1F1|SINE|Alu 454 NM_007408 11520 Mm.381 NM_007408 ENSMUSG00000028494 Plin2 AA407157|ADPH|Adfp|Adrp perilipin 2 protein-coding common_peak1_326_3352_-0.0753600161108618_11.6735567597384_1.26158455138512 chr7 45237787 45240259 + 1.26158455138512 NA promoter-TSS (NM_007645) promoter-TSS (NM_007645) 92 NM_001290802 12493 Mm.3689 NM_007645 ENSMUSG00000030798 Cd37 Tspan26 CD37 antigen protein-coding unique_peak2_19_75_0.443206714187191_6.46953087053718_1.26143771187977-2 chr7 18840870 18841389 + 1.26143771187977 NA intron (NM_153760, intron 1 of 4) intron (NM_153760, intron 1 of 4) 1163 NM_153760 243864 Mm.233503 NM_153760 ENSMUSG00000040987 Mill2 Micb MHC I like leukocyte 2 protein-coding unique_peak2_19_75_0.443206714187191_6.46953087053718_1.26143771187977 chr2 153779149 153779853 + 1.26143771187977 NA Intergenic Intergenic -1378 NR_036629 100504221 Mm.246778 NM_177849 ENSMUSG00000044083 Efcab8 A630008I04|EG329541 EF-hand calcium binding domain 8 ncRNA common_peak2_19_75_0.443206714187191_6.46953087053718_1.26143771187977 chrX 75764149 75764761 + 1.26143771187977 NA intron (NR_029443, intron 1 of 8) intron (NR_029443, intron 1 of 8) 244 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA common_peak1_19_75_0.443206714187191_6.46953087053718_1.26143771187977 chr10 125389074 125389591 + 1.26143771187977 NA Intergenic CpG -60797 NM_011391 20503 Mm.29161 NM_011391 ENSMUSG00000020102 Slc16a7 4921534N07Rik|Mct2 solute carrier family 16 (monocarboxylic acid transporters), member 7 protein-coding common_peak1_19_75_0.443206714187191_6.46953087053718_1.26143771187977-2 chr19 16773750 16774141 + 1.26143771187977 NA intron (NM_173028, intron 1 of 71) intron (NM_173028, intron 1 of 71) 6988 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding common_peak1_29_211_-0.319264021965496_7.56828844358045_1.26095731334964 chr10 79417236 79417792 + 1.26095731334964 NA Intergenic IAPLTR3-int|LTR|ERVK -51444 NM_001104537 625029 Mm.469865 NM_001104537 ENSMUSG00000091381 Vmn2r83 EG625029 vomeronasal 2, receptor 83 protein-coding common_peak1_20_81_0.419922639180414_6.56751332420829_1.26086791974381-3 chr12 51871603 51872117 + 1.26086791974381 NA Intergenic RSINE1|SINE|B4 -42324 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak1_20_81_0.419922639180414_6.56751332420829_1.26086791974381 chr11 21171643 21172193 + 1.26086791974381 NA Intergenic Intergenic -67114 NM_139061 245944 Mm.170103 NM_139061 ENSMUSG00000020128 Vps54 Hcc8|Vps54l|mSLP8|wr VPS54 GARP complex subunit protein-coding common_peak1_20_81_0.419922639180414_6.56751332420829_1.26086791974381-6 chr6 65592535 65593012 + 1.26086791974381 NA intron (NM_001001495, intron 1 of 7) intron (NM_001001495, intron 1 of 7) 2375 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak1_20_81_0.419922639180414_6.56751332420829_1.26086791974381-4 chr12 110506756 110507251 + 1.26086791974381 NA intron (NM_012023, intron 1 of 13) ORR1B1|LTR|ERVL-MaLR 21264 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_20_81_0.419922639180414_6.56751332420829_1.26086791974381-5 chr17 5238528 5239049 + 1.26086791974381 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 179979 NM_175349 106557 Mm.432764 NM_175349 ENSMUSG00000101959 Ldhal6b 4933402O15Rik|AI326310|LDHL|Ldhal lactate dehydrogenase A-like 6B protein-coding unique_peak2_20_81_0.419922639180414_6.56751332420829_1.26086791974381 chr2 83695537 83696347 + 1.26086791974381 NA Intergenic CT-rich|Low_complexity|Low_complexity -28455 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak1_20_81_0.419922639180414_6.56751332420829_1.26086791974381-2 chr12 12287356 12287761 + 1.26086791974381 NA intron (NM_029758, intron 2 of 12) intron (NM_029758, intron 2 of 12) 25419 NM_001146119 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding unique_peak2_23_165_-0.36126396325483_7.19440744971951_1.26065700359785 chr17 25796385 25797250 + 1.26065700359785 NA intron (NM_133719, intron 1 of 3) CpG 228 NM_133719 70083 Mm.41925 NM_133719 ENSMUSG00000002274 Metrn 1810034B16Rik|Hyrac meteorin, glial cell differentiation regulator protein-coding common_peak1_23_165_-0.36126396325483_7.19440744971951_1.26065700359785 chr14 55584748 55585315 + 1.26065700359785 NA exon (NM_033146, exon 1 of 5) exon (NM_033146, exon 1 of 5) 223 NM_033146 85308 Mm.40667 NM_033146 ENSMUSG00000022217 Emc9 1500005A01Rik|Cgi112|Fam158a ER membrane protein complex subunit 9 protein-coding common_peak1_81_657_-0.173888197483459_9.27499967499351_1.26055024310972 chr2 32447089 32448446 + 1.26055024310972 NA intron (NM_001164357, intron 1 of 9) intron (NM_001164357, intron 1 of 9) -2690 NM_194335 71254 Mm.102341 NM_194335 ENSMUSG00000039164 Naif1 2310007O20Rik|4933440H19Rik nuclear apoptosis inducing factor 1 protein-coding common_peak2_81_657_-0.173888197483459_9.27499967499351_1.26055024310972 chr5 34525160 34527200 + 1.26055024310972 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) 396 NM_011893 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak2_81_657_-0.173888197483459_9.27499967499351_1.26055024310972-2 chr7 81854067 81856138 + 1.26055024310972 NA Intergenic Intergenic -3899 NR_111910 107769 Mm.221412 NM_145375 ENSMUSG00000038623 Tm6sf1 AI428514|BC023123|C630016D09Rik transmembrane 6 superfamily member 1 protein-coding common_peak1_280_2797_-0.0825887599636932_11.4088858671829_1.26033663932298 chr14 62759208 62761277 + 1.26033663932298 NA promoter-TSS (NR_045503) promoter-TSS (NR_045503) -259 NR_045503 71000 Mm.399410 NR_045503 ENSMUSG00000097775 4931440J10Rik - RIKEN cDNA 4931440J10 gene ncRNA unique_peak2_55_424_-0.218141969820783_8.62224804611467_1.25995976424454 chr1 51571956 51574165 + 1.25995976424454 NA Intergenic Intergenic -94661 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak1_37_274_-0.276311293828775_7.96513216149763_1.25988095945376 chr2 45187003 45187653 + 1.25988095945376 NA Intergenic Intergenic -74049 NM_015753 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak1_163_1477_-0.114762666708012_10.4720492207921_1.25972123084202 chr3 113629419 113631009 + 1.25972123084202 NA promoter-TSS (NM_001038696) promoter-TSS (NM_001038696) -65 NM_001038696 67225 Mm.316928 NM_026043 ENSMUSG00000027981 Rnpc3 2810441O16Rik|AI447568|C030014B17Rik RNA-binding region (RNP1, RRM) containing 3 protein-coding common_peak2_71_433_0.196358751800901_8.85973060834493_1.25816812948025 chr5 142446905 142448398 + 1.25816812948025 NA intron (NM_199068, intron 2 of 8) intron (NM_199068, intron 2 of 8) -16280 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding common_peak1_33_242_-0.294663931445254_7.77748053788315_1.25807667294075 chr6 116264157 116264625 + 1.25807667294075 NA intron (NM_001309446, intron 1 of 9) intron (NM_001309446, intron 1 of 9) 172 NM_001290338 67492 Mm.272772 NM_001081317 ENSMUSG00000042213 Zfand4 Anubl1 zinc finger, AN1-type domain 4 protein-coding common_peak2_39_198_0.281121918273484_7.77718557968039_1.25807667294075-2 chr9 57789642 57791004 + 1.25807667294075 NA TTS (NM_019689) TTS (NM_019689) -24463 NM_007713 102414 Mm.25720 NM_007713 ENSMUSG00000032316 Clk3 AI256811 CDC-like kinase 3 protein-coding common_peak1_39_198_0.281121918273484_7.77718557968039_1.25807667294075 chr16 18343170 18343870 + 1.25807667294075 NA intron (NM_138583, intron 1 of 8) intron (NM_138583, intron 1 of 8) 412 NM_138583 27883 Mm.265990 NM_138583 ENSMUSG00000013539 Tango2 D16H22S680E|T10 transport and golgi organization 2 protein-coding common_peak2_39_198_0.281121918273484_7.77718557968039_1.25807667294075 chr17 71262750 71264061 + 1.25807667294075 NA intron (NM_145158, intron 4 of 7) intron (NM_145158, intron 4 of 7) 47560 NM_145158 246707 Mm.23462 NM_145158 ENSMUSG00000024053 Emilin2 FOAP-10 elastin microfibril interfacer 2 protein-coding common_peak2_135_1185_-0.128515100012763_10.1476307445396_1.25793541490271 chr14 31493964 31496334 + 1.25793541490271 NA promoter-TSS (NM_025907) promoter-TSS (NM_025907) 70 NM_028932 74427 Mm.491208 NM_028932 ENSMUSG00000021890 Eaf1 4933403C17Rik|AI666536 ELL associated factor 1 protein-coding common_peak2_156_1403_-0.117851585898912_10.3964014273551_1.25788174525355 chr4 150280684 150282692 + 1.25788174525355 NA promoter-TSS (NM_001085492) promoter-TSS (NM_001085492) -228 NM_001085492 68703 Mm.291274 NM_001085492 ENSMUSG00000039852 Rere 1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye|eyes3|mKIAA0458 arginine glutamic acid dipeptide (RE) repeats protein-coding common_peak1_302_3060_-0.0788046197682508_11.5403850196429_1.25764540374617 chr14 27335407 27338768 + 1.25764540374617 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) 1050 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_60_468_-0.208924661468403_8.76898178178118_1.25688295454622 chr19 6840030 6841791 + 1.25688295454622 NA promoter-TSS (NM_019924) promoter-TSS (NM_019924) -283 NM_019924 56613 Mm.20914 NM_019924 ENSMUSG00000024952 Rps6ka4 1110069D02Rik|90kDa|AI848992|Msk2|mMSK2 ribosomal protein S6 kinase, polypeptide 4 protein-coding common_peak1_60_468_-0.208924661468403_8.76898178178118_1.25688295454622 chr6 54860830 54861974 + 1.25688295454622 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 44486 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_59_341_0.217416228898163_8.52656062933498_1.25666273933949 chr3 63928846 63929438 + 1.25666273933949 NA intron (NM_177856, intron 1 of 4) CpG 243 NM_177856 329659 Mm.39342 NM_177856 ENSMUSG00000048581 E130311K13Rik - RIKEN cDNA E130311K13 gene protein-coding common_peak2_59_341_0.217416228898163_8.52656062933498_1.25666273933949 chr11 60191598 60193523 + 1.25666273933949 NA intron (NM_001037764, intron 2 of 4) intron (NM_001037764, intron 2 of 4) 8057 NR_105886 102465555 NR_105886 ENSMUSG00000098547 Mir6921 Gm27352|mmu-mir-6921 microRNA 6921 ncRNA common_peak2_52_398_-0.224503170779233_8.52799335083273_1.25666273933949 chr15 88818582 88819483 + 1.25666273933949 NA promoter-TSS (NM_029720) promoter-TSS (NM_029720) 286 NM_001142357 223774 Mm.41512 NM_145477 ENSMUSG00000035845 Alg12 ECM39 asparagine-linked glycosylation 12 (alpha-1,6-mannosyltransferase) protein-coding common_peak2_52_398_-0.224503170779233_8.52799335083273_1.25666273933949-2 chr16 45742200 45743503 + 1.25666273933949 NA exon (NM_001272070, exon 1 of 6) exon (NM_001272070, exon 1 of 6) 104 NM_001272070 213012 Mm.247453 NM_172511 ENSMUSG00000033157 Abhd10 - abhydrolase domain containing 10 protein-coding common_peak1_59_341_0.217416228898163_8.52656062933498_1.25666273933949-2 chr9 72958225 72959288 + 1.25666273933949 NA promoter-TSS (NM_001163725) promoter-TSS (NM_001163725) -29 NM_026314 67685 Mm.31817 NM_026314 ENSMUSG00000089865 Dyx1c1 1700010I24Rik|Dnaaf4|EKN1|b2b811.1Clo|b2b811Clo dyslexia susceptibility 1 candidate 1 protein-coding common_peak2_226_2170_-0.0941992636274129_11.0370443788014_1.2565619182676 chr14 106025355 106029266 + 1.2565619182676 NA Intergenic Intergenic -78888 NM_198601 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_112_779_0.14818918442279_9.68142490596101_1.25634917647005 chr4 141077451 141078364 + 1.25634917647005 NA intron (NM_025383, intron 1 of 7) CpG 438 NM_025383 66147 Mm.21187 NM_025383 ENSMUSG00000028923 Necap2 1110005F07Rik|AA409105|C78898 NECAP endocytosis associated 2 protein-coding common_peak1_87_713_-0.166757898962436_9.39640131454788_1.25593437574714 chr4 98922384 98923302 + 1.25593437574714 NA promoter-TSS (NM_146144) promoter-TSS (NM_146144) -967 NM_001301414 230484 Mm.371692 NM_146144 ENSMUSG00000028560 Usp1 - ubiquitin specific peptidase 1 protein-coding unique_peak2_35_171_0.305032918356925_7.57878121388056_1.25592529893982 chr2 11182733 11184356 + 1.25592529893982 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 11162 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_42_218_0.270940110652777_7.91025711492756_1.25576777401666 chr10 63386462 63387281 + 1.25576777401666 NA intron (NM_013888, intron 1 of 4) intron (NM_013888, intron 1 of 4) 308 NM_013888 30045 Mm.32550 NM_013888 ENSMUSG00000036764 Dnajc12 Jdp1|mJDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding common_peak2_42_218_0.270940110652777_7.91025711492756_1.25576777401666 chr18 67299308 67300338 + 1.25576777401666 NA intron (NM_053261, intron 1 of 7) intron (NM_053261, intron 1 of 7) 10600 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding unique_peak2_40_298_-0.262558409132679_8.09272246963176_1.25545424103766 chr17 56405334 56406990 + 1.25545424103766 NA Intergenic Intergenic 12747 NR_105943 102465590 NR_105943 ENSMUSG00000098339 Mir6977 Gm27922|mmu-mir-6977 microRNA 6977 ncRNA common_peak2_125_897_0.137649836396992_9.87939655293964_1.25535117408107 chr1 39575849 39578196 + 1.25535117408107 NA exon (NM_001033135, exon 1 of 7) exon (NM_001033135, exon 1 of 7) 325 NM_001033135 67702 Mm.28614 NM_001033135 ENSMUSG00000048234 Rnf149 1600023E10Rik|AV037261|C76763|Gm15832|Greul4|OTTMUSG00000026591 ring finger protein 149 protein-coding common_peak1_441_4407_0.0632449786642031_12.1375309979033_1.25520138171669 chr10 93159674 93163235 + 1.25520138171669 NA intron (NM_146239, intron 1 of 16) CpG 578 NM_146239 237459 Mm.217404 NM_146239 ENSMUSG00000020015 Cdk17 6430598J10Rik|Pctk2 cyclin-dependent kinase 17 protein-coding common_peak2_48_260_0.2489702403408_8.15239111674028_1.2546553518503 chr3 108726539 108728315 + 1.2546553518503 NA Intergenic ORR1B1|LTR|ERVL-MaLR -5128 NM_029522 76123 Mm.226941 NM_029522 ENSMUSG00000027883 Gpsm2 6230410J09Rik|LGN|Pins G-protein signalling modulator 2 (AGS3-like, C. elegans) protein-coding common_peak1_101_846_-0.151935071018386_9.65025062382301_1.25431889994397 chr9 54950290 54951627 + 1.25431889994397 NA promoter-TSS (NM_011966) promoter-TSS (NM_011966) -4 NM_145229 246735 Mm.473773 NM_145229 ENSMUSG00000044820 AY074887 Mcpr1 cDNA sequence AY074887 protein-coding common_peak2_160_1228_0.118727712986317_10.3226330568658_1.25363068692807 chr15 6553600 6557779 + 1.25363068692807 NA Intergenic Intergenic -24158 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak2_66_394_0.204834857085258_8.7281262716071_1.25356417553026-2 chr3 19894347 19895669 + 1.25356417553026 NA non-coding (NR_027985, exon 1 of 1) non-coding (NR_027985, exon 1 of 1) 137 NR_027985 70808 Mm.427103 NR_027985 ENSMUSG00000048106 4632415L05Rik AI662792 RRS1 ribosome biogenesis regulator homolog pseudogene pseudo common_peak2_66_394_0.204834857085258_8.7281262716071_1.25356417553026 chr17 70973051 70975272 + 1.25356417553026 NA 3' UTR (NM_023402, exon 4 of 4) 3' UTR (NM_023402, exon 4 of 4) 16355 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak1_262_2292_0.0874203796946684_11.2067308294281_1.25353879203183 chr13 45453012 45456236 + 1.25353879203183 NA Intergenic Intergenic -52820 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak1_31_146_0.32319322947516_7.36126895957394_1.2533247833575 chr1 163994258 163994856 + 1.2533247833575 NA promoter-TSS (NM_027279) promoter-TSS (NM_027279) 224 NM_201364 381306 Mm.28152 NM_201364 ENSMUSG00000041406 BC055324 - cDNA sequence BC055324 protein-coding common_peak1_31_146_0.32319322947516_7.36126895957394_1.2533247833575-2 chrX 101733290 101734032 + 1.2533247833575 NA intron (NM_009910, intron 1 of 1) PB1|SINE|Alu 486 NM_009910 12766 Mm.12876 NM_009910 ENSMUSG00000050232 Cxcr3 Cd183|Cmkar3 chemokine (C-X-C motif) receptor 3 protein-coding common_peak1_18_70_0.450617083892208_6.37505566145079_1.25310961472615-3 chr16 92300880 92301187 + 1.25310961472615 NA promoter-TSS (NM_138743) promoter-TSS (NM_138743) -270 NM_138743 68936 Mm.21698 NM_138743 ENSMUSG00000051989 Smim11 1190017O12Rik|C21orf51|Fam165b|Smim11a small integral membrane protein 11 protein-coding common_peak1_18_70_0.450617083892208_6.37505566145079_1.25310961472615-5 chr5 134268880 134269228 + 1.25310961472615 NA intron (NM_001080749, intron 10 of 32) intron (NM_001080749, intron 10 of 32) -39429 NR_104383 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak1_18_70_0.450617083892208_6.37505566145079_1.25310961472615-2 chr13 52823025 52823418 + 1.25310961472615 NA Intergenic Intergenic -66016 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak1_18_70_0.450617083892208_6.37505566145079_1.25310961472615-6 chr7 16367865 16368359 + 1.25310961472615 NA intron (NM_001285891, intron 4 of 9) intron (NM_001285891, intron 4 of 9) 19784 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding common_peak1_18_70_0.450617083892208_6.37505566145079_1.25310961472615 chr11 78212928 78213312 + 1.25310961472615 NA intron (NM_009297, intron 29 of 36) intron (NM_009297, intron 29 of 36) 19728 NM_001045516 216974 Mm.50974 NM_001045516 ENSMUSG00000044122 Proca1 4933404M19Rik protein interacting with cyclin A1 protein-coding common_peak1_18_70_0.450617083892208_6.37505566145079_1.25310961472615-4 chr5 74523703 74524135 + 1.25310961472615 NA intron (NM_001286437, intron 1 of 7) intron (NM_001286437, intron 1 of 7) 7823 NM_178672 212986 Mm.134147 NM_178672 ENSMUSG00000062110 Scfd2 E430013M20Rik|STXBP1L1 Sec1 family domain containing 2 protein-coding common_peak2_57_441_-0.212626933692507_8.68158909254518_1.25288610126288 chr7 102337267 102339449 + 1.25288610126288 NA intron (NM_009287, intron 1 of 11) intron (NM_009287, intron 1 of 11) 70534 NM_009287 20866 Mm.645 NM_009287 ENSMUSG00000030987 Stim1 SIM stromal interaction molecule 1 protein-coding common_peak1_57_441_-0.212626933692507_8.68158909254518_1.25288610126288 chr7 89253420 89254425 + 1.25288610126288 NA intron (NM_028343, intron 4 of 14) L1M2|LINE|L1 84865 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding common_peak2_274_2425_0.0850327701437266_11.2868802201924_1.25282842022219 chr7 128061834 128066387 + 1.25282842022219 NA intron (NM_001082960, intron 1 of 29) B1_Mur3|SINE|Alu 1470 NM_008401 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak2_76_611_-0.180666301919585_9.16705469173286_1.25266726961981 chr19 46689395 46690788 + 1.25266726961981 NA intron (NM_025563, intron 1 of 4) CpG 185 NM_025563 66439 Mm.87163 NM_025563 ENSMUSG00000062376 Borcs7 2010012O05Rik|4930569L17Rik|AI413851|AI467257 BLOC-1 related complex subunit 7 protein-coding common_peak2_76_611_-0.180666301919585_9.16705469173286_1.25266726961981-2 chrX 166660760 166662569 + 1.25266726961981 NA promoter-TSS (NR_046015) promoter-TSS (NR_046015) -361 NR_046015 382255 Mm.336320 NR_046015 ENSMUSG00000086860 Gm1720 - predicted gene 1720 ncRNA common_peak2_56_318_0.227086105785304_8.43095566665752_1.25264468359381 chr4 122835434 122836902 + 1.25264468359381 NA promoter-TSS (NM_008917) promoter-TSS (NM_008917) -59 NM_008917 19063 Mm.277719 NM_008917 ENSMUSG00000028657 Ppt1 9530043G02Rik|AA960502|C77813|CLN1|D4Ertd184e|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding unique_peak2_28_203_-0.323762027458927_7.51054432824203_1.25220636855433 chrX 136244547 136245749 + 1.25220636855433 NA promoter-TSS (NM_011712) promoter-TSS (NM_011712) 68 NM_011712 22381 Mm.512 NM_011712 ENSMUSG00000042712 Wbp5 AL024233|Tceal9 WW domain binding protein 5 protein-coding common_peak2_104_709_0.153905016284774_9.54862772253443_1.25192872064358 chr6 72344455 72345981 + 1.25192872064358 NA promoter-TSS (NM_138592) promoter-TSS (NM_138592) -43 NM_138592 28035 Mm.281900 NM_138592 ENSMUSG00000056305 Usp39 AA408960|AI894154|CGI-21|D6Wsu157e|SAD1 ubiquitin specific peptidase 39 protein-coding common_peak2_90_589_0.167773898470843_9.28845809348462_1.25134277817377 chr2 84504516 84506905 + 1.25134277817377 NA intron (NR_046046, intron 1 of 2) IAPEz-int|LTR|ERVK 1163 NR_046046 672763 Mm.491046 NR_046046 ENSMUSG00000087362 Gm13710 OTTMUSG00000013441 predicted gene 13710 ncRNA common_peak2_139_1027_0.129045787702367_10.0701474430451_1.25120732579985 chr8 126944638 126946615 + 1.25120732579985 NA exon (NM_024214, exon 1 of 5) exon (NM_024214, exon 1 of 5) 295 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak1_46_348_-0.243952138783635_8.32510715681784_1.25073322429732 chr13 95715735 95716648 + 1.25073322429732 NA intron (NM_027711, intron 11 of 35) intron (NM_027711, intron 11 of 35) 19271 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak1_98_657_0.159510690078923_9.4416991187747_1.25061048542057 chr11 83626194 83627611 + 1.25061048542057 NA Intergenic MLT2B4|LTR|ERVL 22476 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak1_22_158_-0.374422151190846_7.12567187968893_1.25013132975994-2 chr3 87767408 87767985 + 1.25013132975994 NA intron (NM_001289601, intron 1 of 24) intron (NM_001289601, intron 1 of 24) 1257 NM_001032413 73182 Mm.158962 NM_028460 ENSMUSG00000028073 Pear1 3110045G13Rik|Jedi-1|Megf12 platelet endothelial aggregation receptor 1 protein-coding common_peak1_22_158_-0.374422151190846_7.12567187968893_1.25013132975994 chr13 43171617 43172069 + 1.25013132975994 NA promoter-TSS (NM_001252640) promoter-TSS (NM_001252640) -342 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_408_3998_0.0664161604998128_11.99863164606_1.24878882870495 chr6 38353128 38355894 + 1.24878882870495 NA promoter-TSS (NM_028421) promoter-TSS (NM_028421) 92 NM_028864 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding common_peak1_54_415_-0.219148699755177_8.5908653682635_1.24814407664043 chr8 128647636 128648666 + 1.24814407664043 NA Intergenic Intergenic -37503 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_36_266_-0.280912280476144_7.92023979144948_1.24788615163356 chr3 22075616 22076138 + 1.24788615163356 NA promoter-TSS (NM_030732) promoter-TSS (NM_030732) -775 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak2_53_296_0.234500757225184_8.33156949941336_1.24778174138359 chr14 75318305 75320298 + 1.24778174138359 NA intron (NM_026083, intron 8 of 18) intron (NM_026083, intron 8 of 18) 34928 NM_026083 67302 Mm.74704 NM_026083 ENSMUSG00000022000 Zc3h13 2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618 zinc finger CCCH type containing 13 protein-coding common_peak2_53_296_0.234500757225184_8.33156949941336_1.24778174138359 chr9 121846236 121847937 + 1.24778174138359 NA Intergenic Intergenic -7625 NM_028384 100502861 Mm.335550 NM_028384 ENSMUSG00000079235 Ccdc13 2900041A11Rik|Gm188 coiled-coil domain containing 13 protein-coding common_peak1_32_234_-0.29919699890412_7.72691844711294_1.24736665976303 chr4 145254764 145255234 + 1.24736665976303 NA Intergenic Intergenic -8129 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_38_191_0.287980948886704_7.72895297516451_1.24736665976303 chr17 78937109 78937759 + 1.24736665976303 NA promoter-TSS (NM_001024806) promoter-TSS (NM_001024806) 299 NM_028611 73694 Mm.104959 NM_028611 ENSMUSG00000024082 Ndufaf7 2410091C18Rik|AL033374|PRO1853 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7 protein-coding common_peak1_32_234_-0.29919699890412_7.72691844711294_1.24736665976303-2 chr8 110969916 110970437 + 1.24736665976303 NA exon (NM_009179, exon 7 of 7) exon (NM_009179, exon 7 of 7) 27647 NM_007916 13680 Mm.287901 NM_007916 ENSMUSG00000015023 Ddx19a DBP5|Ddx19|Eif4a-rs1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a protein-coding common_peak1_21_150_-0.378606996631127_7.04910124100951_1.24730910709385 chr15 34443957 34444327 + 1.24730910709385 NA promoter-TSS (NR_028101) promoter-TSS (NR_028101) -866 NM_001163485 19946 Mm.358632 NM_009083 ENSMUSG00000058600 Rpl30 - ribosomal protein L30 protein-coding common_peak1_21_150_-0.378606996631127_7.04910124100951_1.24730910709385-2 chr3 104794678 104795219 + 1.24730910709385 NA TTS (NM_001291859) TTS (NM_001291859) 5914 NM_007484 11853 Mm.262 NM_007484 ENSMUSG00000002233 Rhoc AI324259|Arh9|Arhc ras homolog family member C protein-coding common_peak2_148_1318_-0.120303847143923_10.3050769256796_1.24719179684464 chr11 52317825 52320206 + 1.24719179684464 NA Intergenic Intergenic -36001 NM_001313981 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak2_77_482_0.183676381958444_9.007717569815_1.24716115214886 chrX 101221609 101223260 + 1.24716115214886 NA 5' UTR (NM_001110310, exon 1 of 4) 5' UTR (NM_001110310, exon 1 of 4) 129 NM_001110311 55988 Mm.206949 NM_018875 ENSMUSG00000046032 Snx12 2610001F05Rik|AW045757|SDP8 sorting nexin 12 protein-coding common_peak1_77_482_0.183676381958444_9.007717569815_1.24716115214886 chr6 54859856 54860821 + 1.24716115214886 NA intron (NM_199143, intron 1 of 4) L1VL2|LINE|L1 43422 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak2_82_666_-0.172037082016237_9.29552441017647_1.24680503290471 chr11 61493235 61494987 + 1.24680503290471 NA 5' UTR (NM_011841, exon 1 of 7) 5' UTR (NM_011841, exon 1 of 7) 155 NM_001291037 23939 Mm.38172 NM_011841 ENSMUSG00000001034 Mapk7 BMK-1|BMK1|ERK-5|ERK5|Erk5-T|PRKM7 mitogen-activated protein kinase 7 protein-coding common_peak1_17_65_0.460291242514214_6.27453974061556_1.24640685895412-4 chr7 24531512 24531933 + 1.24640685895412 NA exon (NM_153134, exon 2 of 3) exon (NM_153134, exon 2 of 3) 1074 NM_153134 210146 Mm.41108 NM_153134 ENSMUSG00000041037 Irgq AF322649|FKSG27|Irgq1 immunity-related GTPase family, Q protein-coding common_peak1_17_65_0.460291242514214_6.27453974061556_1.24640685895412 chr11 22848110 22848519 + 1.24640685895412 NA intron (NM_001169114, intron 1 of 1) intron (NM_001169114, intron 1 of 1) 11421 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak1_17_65_0.460291242514214_6.27453974061556_1.24640685895412-3 chr6 99055908 99056334 + 1.24640685895412 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) -27823 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak2_17_65_0.460291242514214_6.27453974061556_1.24640685895412 chr18 79089544 79090209 + 1.24640685895412 NA intron (NM_053099, intron 1 of 5) intron (NM_053099, intron 1 of 5) 19515 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_17_65_0.460291242514214_6.27453974061556_1.24640685895412-5 chrX 48448838 48449212 + 1.24640685895412 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 14107 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak1_17_65_0.460291242514214_6.27453974061556_1.24640685895412-2 chr12 12571128 12571599 + 1.24640685895412 NA Intergenic Intergenic -178888 NR_045829 70858 Mm.410838 NR_045829 4921511I17Rik - RIKEN cDNA 4921511I17 gene ncRNA common_peak1_338_3158_0.0744017925788114_11.6624531180363_1.24634918820819 chr14 54059787 54062801 + 1.24634918820819 NA Intergenic Intergenic 192635 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_181_1437_0.109109393467106_10.5444026571728_1.24571894506084 chr2 4881366 4883895 + 1.24571894506084 NA intron (NM_175400, intron 1 of 8) CpG 1066 NM_175400 109079 Mm.34329 NM_175400 ENSMUSG00000026662 Sephs1 1110046B24Rik|AA589574|AI505014|AW111620|SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding common_peak1_63_371_0.210319074389849_8.64431834830296_1.24556750544241-2 chr8 105826593 105827306 + 1.24556750544241 NA promoter-TSS (NM_024445) promoter-TSS (NM_024445) 401 NM_145824 74334 Mm.4206 NM_145824 ENSMUSG00000037415 Ranbp10 4432417N03Rik RAN binding protein 10 protein-coding common_peak2_63_371_0.210319074389849_8.64431834830296_1.24556750544241 chr5 113974541 113976425 + 1.24556750544241 NA intron (NM_198109, intron 2 of 14) intron (NM_198109, intron 2 of 14) 18274 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot homolog 1 (Drosophila) protein-coding common_peak1_63_371_0.210319074389849_8.64431834830296_1.24556750544241 chr5 122778546 122779429 + 1.24556750544241 NA intron (NM_145358, intron 1 of 15) CpG 423 NM_001199676 207565 Mm.289237 NM_145358 ENSMUSG00000029471 Camkk2 6330570N16Rik|AW061083|mKIAA0787 calcium/calmodulin-dependent protein kinase kinase 2, beta protein-coding common_peak1_13_45_0.536390482774557_5.79175719744429_1.24554587181539-2 chr9 40414859 40415239 + 1.24554587181539 NA intron (NM_172768, intron 1 of 19) B1_Mur4|SINE|Alu 40715 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak1_13_45_0.536390482774557_5.79175719744429_1.24554587181539 chr11 32584656 32585088 + 1.24554587181539 NA intron (NM_009288, intron 4 of 18) intron (NM_009288, intron 4 of 18) 51606 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_59_459_-0.210221307160316_8.74037939736422_1.24465723844539 chr5 110094084 110095426 + 1.24465723844539 NA Intergenic Intergenic -5214 NM_207279 403178 Mm.297057 NM_207279 ENSMUSG00000064247 Plcxd1 A330045H12Rik|Gm576 phosphatidylinositol-specific phospholipase C, X domain containing 1 protein-coding common_peak1_124_888_0.138081170184934_9.86508019392224_1.24399635836724 chr8 84655989 84657603 + 1.24399635836724 NA Intergenic CpG 6056 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding common_peak2_124_888_0.138081170184934_9.86508019392224_1.24399635836724 chr10 122793763 122795603 + 1.24399635836724 NA intron (NM_176919, intron 2 of 8) intron (NM_176919, intron 2 of 8) 115368 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA unique_peak2_27_195_-0.328145094097283_7.45063729706657_1.24394715320423 chr11 50161705 50162904 + 1.24394715320423 NA intron (NM_001290759, intron 17 of 21) intron (NM_001290759, intron 17 of 21) -12547 NM_026543 68067 Mm.40828 NM_026543 ENSMUSG00000020381 Mrnip 2900016G09Rik|3010026O09Rik|AI851514|AW475975 MRN complex interacting protein protein-coding common_peak2_27_195_-0.328145094097283_7.45063729706657_1.24394715320423-2 chr4 119173342 119174335 + 1.24394715320423 NA promoter-TSS (NM_001145935) promoter-TSS (NM_001145935) 18 NM_001145935 195522 Mm.169620 NM_183140 ENSMUSG00000045268 Zfp691 6430544H17Rik|Znf691 zinc finger protein 691 protein-coding common_peak1_27_195_-0.328145094097283_7.45063729706657_1.24394715320423 chr6 7843965 7844493 + 1.24394715320423 NA promoter-TSS (NM_052993) promoter-TSS (NM_052993) -995 NM_052993 94192 Mm.102752 NM_052993 ENSMUSG00000042460 C1galt1 2210410E06Rik|AV284120|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 protein-coding common_peak2_27_195_-0.328145094097283_7.45063729706657_1.24394715320423 chr11 98788362 98789180 + 1.24394715320423 NA Intergenic B1_Mur1|SINE|Alu -6998 NM_028722 74026 Mm.258352 NM_028722 ENSMUSG00000052915 Msl1 2810017F12Rik|4121402D02Rik|4930463F05Rik|AA682082|Msl-1 male-specific lethal 1 homolog (Drosophila) protein-coding common_peak2_121_1043_-0.136774234336556_9.95951887940161_1.24372375718394 chr9 56102569 56105786 + 1.24372375718394 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 14201 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak1_154_1171_0.120030937190378_10.2547723230174_1.24352363616616 chr16 13902398 13903891 + 1.24352363616616 NA promoter-TSS (NM_001039533) promoter-TSS (NM_001039533) 1 NM_001039533 94184 Mm.171484 NM_053181 ENSMUSG00000022680 Pdxdc1 2210010A19Rik|AA415817|Kiaa0251-hp pyridoxal-dependent decarboxylase domain containing 1 protein-coding common_peak2_100_836_-0.152235618944886_9.6329660030779_1.24288546134924 chr17 24706848 24708692 + 1.24288546134924 NA promoter-TSS (NM_145396) promoter-TSS (NM_145396) -117 NM_145396 213773 Mm.100353 NM_145396 ENSMUSG00000040688 Tbl3 9430070M15Rik transducin (beta)-like 3 protein-coding common_peak1_39_290_-0.267128804091151_8.05131094086271_1.24273726589778 chr4 134286797 134287337 + 1.24273726589778 NA intron (NM_146156, intron 1 of 2) CpG 186 NM_001163794 230809 Mm.22778 NM_146156 ENSMUSG00000050890 Pdik1l BC027088|stk35l2 PDLIM1 interacting kinase 1 like protein-coding common_peak2_58_334_0.21750911969669_8.49677184519348_1.24254158504961 chr1 173673124 173674449 + 1.24254158504961 NA 5' UTR (NM_001162938, exon 1 of 7) 5' UTR (NM_001162938, exon 1 of 7) 106 NM_001162938 100033459 Mm.303377 NM_001162938 ENSMUSG00000066677 Ifi208 9830148g24rik|E430029J22Rik|Pydc3|Pyr-rv1 interferon activated gene 208 protein-coding common_peak2_58_334_0.21750911969669_8.49677184519348_1.24254158504961-2 chr2 36048419 36049544 + 1.24254158504961 NA promoter-TSS (NM_029309) promoter-TSS (NM_029309) 311 NM_026703 68375 Mm.19834 NM_026703 ENSMUSG00000026895 Ndufa8 0610033L03Rik|AW261656 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 protein-coding common_peak2_58_334_0.21750911969669_8.49677184519348_1.24254158504961-3 chr8 22165542 22167143 + 1.24254158504961 NA promoter-TSS (NM_011848) promoter-TSS (NM_011848) 93 NM_011848 23954 Mm.41413 NM_011848 ENSMUSG00000031478 Nek3 - NIMA (never in mitosis gene a)-related expressed kinase 3 protein-coding common_peak2_51_390_-0.228991241480065_8.49652917656732_1.24254158504951 chrX 95956245 95957873 + 1.24254158504951 NA promoter-TSS (NM_152822) promoter-TSS (NM_152822) -85 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding common_peak2_140_1037_0.127674875221421_10.0834281659686_1.24244810556818 chr8 126583583 126587115 + 1.24244810556818 NA Intergenic Intergenic 8087 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_435_4333_0.0634834198086747_12.113225147998_1.24242117457545 chr1 58710735 58712793 + 1.24242117457545 NA intron (NM_001289704, intron 1 of 9) CpG 273 NM_001293804 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak2_34_165_0.306406283176609_7.52824257293523_1.24188279827307 chr7 80575358 80576580 + 1.24188279827307 NA Intergenic ORR1D2|LTR|ERVL-MaLR -40850 NM_001042527 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding common_peak1_94_779_-0.158860523474399_9.52790005201241_1.2417754212705 chr11 117809526 117810788 + 1.2417754212705 NA intron (NM_009304, intron 1 of 3) CpG 490 NM_009304 20973 Mm.468228 NM_009304 ENSMUSG00000048277 Syngr2 Clast2|cellugyrin synaptogyrin 2 protein-coding common_peak1_16_60_0.472798923411285_6.16713679926853_1.24170275160342-5 chr4 128734097 128734501 + 1.24170275160342 NA intron (NM_001195083, intron 1 of 6) intron (NM_001195083, intron 1 of 6) 6728 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic-like 2 (Drosophila) protein-coding common_peak1_16_60_0.472798923411285_6.16713679926853_1.24170275160342 chr10 118080412 118080814 + 1.24170275160342 NA Intergenic MLT1L|LTR|ERVL-MaLR -61174 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak1_16_60_0.472798923411285_6.16713679926853_1.24170275160342-3 chr13 113396655 113397100 + 1.24170275160342 NA Intergenic Intergenic 105967 NR_045501 70917 Mm.491036 NR_045501 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak1_16_60_0.472798923411285_6.16713679926853_1.24170275160342-2 chr13 17628191 17628561 + 1.24170275160342 NA intron (NM_138654, intron 6 of 13) Lx2|LINE|L1 66389 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding unique_peak1_16_60_0.472798923411285_6.16713679926853_1.24170275160342 chr19 10842773 10843208 + 1.24170275160342 NA 5' UTR (NM_023044, exon 1 of 8) 5' UTR (NM_023044, exon 1 of 8) 446 NM_023044 65221 Mm.27387 NM_023044 ENSMUSG00000024737 Slc15a3 Ci1|cI-1 solute carrier family 15, member 3 protein-coding common_peak1_16_60_0.472798923411285_6.16713679926853_1.24170275160342-4 chr4 101202184 101202591 + 1.24170275160342 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 62895 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding unique_peak1_16_60_0.472798923411285_6.16713679926853_1.24170275160342-2 chr3 97227793 97228170 + 1.24170275160342 NA promoter-TSS (NM_029933) promoter-TSS (NM_029933) -617 NM_029933 77578 Mm.226175 NM_029933 ENSMUSG00000038256 Bcl9 2610202E01Rik|8030475K17Rik|A330041G23Rik|Gm130 B cell CLL/lymphoma 9 protein-coding common_peak2_174_1367_0.111698786515957_10.4737019081439_1.2416803828693 chr12 77237669 77240308 + 1.2416803828693 NA non-coding (NR_045554, exon 1 of 12) non-coding (NR_045554, exon 1 of 12) 249 NR_045554 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding common_peak2_47_253_0.251703092506286_8.11453623302531_1.24166058662978 chr18 39082435 39084460 + 1.24166058662978 NA intron (NM_175164, intron 1 of 22) MER45B|DNA|hAT-Tip100 90302 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak2_47_253_0.251703092506286_8.11453623302531_1.24166058662978-2 chr19 14387322 14388534 + 1.24166058662978 NA Intergenic Intergenic 50578 NR_003027 19862 NR_003027 ENSMUSG00000095132 Rnu6 - U6 small nuclear RNA snRNA common_peak2_83_531_0.175416830670022_9.1429908508362_1.24157825844724 chr17 27133389 27134306 + 1.24157825844724 NA promoter-TSS (NM_026063) promoter-TSS (NM_026063) 44 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding common_peak2_48_364_-0.234876416856695_8.39431444533903_1.24150554526279 chr5 119321182 119322585 + 1.24150554526279 NA Intergenic ORR1F|LTR|ERVL-MaLR -121865 NR_046033 665194 Mm.491047 NR_046033 ENSMUSG00000107334 Gm7538 EG665194 predicted gene 7538 ncRNA common_peak1_42_314_-0.253480848133329_8.17246759432062_1.24142307100413 chr15 89315392 89315976 + 1.24142307100413 NA promoter-TSS (NM_001170561) promoter-TSS (NM_001170561) -373 NM_001170561 77980 Mm.35483 NM_030019 ENSMUSG00000036529 Sbf1 2610510A08Rik|B230113C15Rik|Mtmr5|mKIAA3020 SET binding factor 1 protein-coding common_peak1_107_736_0.149911380117237_9.60047649915369_1.24104053458491 chr10 24711336 24712614 + 1.24104053458491 NA exon (NM_008813, exon 1 of 25) exon (NM_008813, exon 1 of 25) 184 NM_001308327 18605 Mm.27254 NM_008813 ENSMUSG00000037370 Enpp1 4833416E15Rik|AI428932|C76301|CD203c|E-NPP 1|E-NPP1|Ly-41|M6S1|NPP1|Npps|PC-1|Pca|Pca-1|Pdnp1|ttw|twy ectonucleotide pyrophosphatase/phosphodiesterase 1 protein-coding common_peak1_30_140_0.327130852335513_7.30311677856655_1.24094563911193-5 chr9 40757744 40758447 + 1.24094563911193 NA intron (NM_133733, intron 1 of 6) intron (NM_133733, intron 1 of 6) -43178 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding common_peak2_30_140_0.327130852335513_7.30311677856655_1.24094563911193-2 chr5 120830771 120831877 + 1.24094563911193 NA Intergenic ORR1A4|LTR|ERVL-MaLR -16043 NM_145153 243262 Mm.105369 NM_145153 ENSMUSG00000053765 Oas1f - 2'-5' oligoadenylate synthetase 1F protein-coding common_peak1_30_140_0.327130852335513_7.30311677856655_1.24094563911193 chr11 95040782 95041424 + 1.24094563911193 NA intron (NM_133667, intron 1 of 10) CpG 268 NM_133667 18604 Mm.29768 NM_133667 ENSMUSG00000038967 Pdk2 - pyruvate dehydrogenase kinase, isoenzyme 2 protein-coding common_peak1_30_140_0.327130852335513_7.30311677856655_1.24094563911193-4 chr4 148447856 148448510 + 1.24094563911193 NA promoter-TSS (NM_020009) promoter-TSS (NM_020009) -399 NM_020009 56717 Mm.21158 NM_020009 ENSMUSG00000028991 Mtor 2610315D21Rik|AI327068|FRAP|FRAP2|Frap1|RAFT1|RAPT1|flat mechanistic target of rapamycin (serine/threonine kinase) protein-coding common_peak2_30_140_0.327130852335513_7.30311677856655_1.24094563911193-4 chr9 51962767 51963741 + 1.24094563911193 NA intron (NM_001301728, intron 1 of 3) CpG 348 NM_007996 14148 Mm.1061 NM_007996 ENSMUSG00000032051 Fdx1 - ferredoxin 1 protein-coding common_peak1_30_140_0.327130852335513_7.30311677856655_1.24094563911193-3 chr2 91984162 91984671 + 1.24094563911193 NA intron (NM_011957, intron 10 of 11) intron (NM_011957, intron 10 of 11) -20853 NM_138306 104418 Mm.314923 NM_138306 ENSMUSG00000040479 Dgkz E130307B02Rik|ENSMUSG00000075035|F730209L11Rik|mDGK[z] diacylglycerol kinase zeta protein-coding unique_peak2_30_140_0.327130852335513_7.30311677856655_1.24094563911193 chr2 6695338 6696320 + 1.24094563911193 NA intron (NM_001310447, intron 1 of 11) intron (NM_001310447, intron 1 of 11) 25833 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_30_140_0.327130852335513_7.30311677856655_1.24094563911193-2 chr13 81176349 81176837 + 1.24094563911193 NA intron (NM_054053, intron 86 of 89) (TA)n|Simple_repeat|Simple_repeat 212519 NR_015587 319983 Mm.343027 NR_015587 ENSMUSG00000097098 9330111N05Rik - RIKEN cDNA 9330111N05 gene ncRNA common_peak2_30_140_0.327130852335513_7.30311677856655_1.24094563911193 chr12 12570371 12571558 + 1.24094563911193 NA Intergenic URR1B|DNA|hAT-Charlie -178489 NR_045829 70858 Mm.410838 NR_045829 4921511I17Rik - RIKEN cDNA 4921511I17 gene ncRNA common_peak2_30_140_0.327130852335513_7.30311677856655_1.24094563911193-3 chr9 25481388 25482243 + 1.24094563911193 NA 5' UTR (NM_026189, exon 1 of 8) 5' UTR (NM_026189, exon 1 of 8) 218 NM_026189 67484 Mm.112977 NM_026189 ENSMUSG00000036611 Eepd1 2310005P05Rik|AI481005 endonuclease/exonuclease/phosphatase family domain containing 1 protein-coding common_peak2_128_1113_-0.131671830932799_10.0556976018736_1.24089246239449 chr19 6235251 6236773 + 1.24089246239449 NA promoter-TSS (NM_198168) promoter-TSS (NM_198168) -172 NM_198168 225849 Mm.118076 NM_198168 ENSMUSG00000024777 Ppp2r5b B'beta|BC026670 protein phosphatase 2, regulatory subunit B', beta protein-coding common_peak2_128_1113_-0.131671830932799_10.0556976018736_1.24089246239449-2 chrX 159756445 159759171 + 1.24089246239449 NA intron (NM_021389, intron 1 of 16) intron (NM_021389, intron 1 of 16) 49207 NR_110970 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_210_1988_-0.0972282216947811_10.9092134499864_1.24052174049586 chr11 95384218 95385411 + 1.24052174049586 NA promoter-TSS (NM_016752) promoter-TSS (NM_016752) -108 NM_016752 110172 Mm.4593 NM_016752 ENSMUSG00000020873 Slc35b1 Ugalt2 solute carrier family 35, member B1 protein-coding common_peak1_14_50_0.509618779439853_5.92723473169142_1.24045976088195 chr2 32541347 32541744 + 1.24045976088195 NA intron (NM_153560, intron 1 of 10) intron (NM_153560, intron 1 of 10) 6186 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak1_14_50_0.509618779439853_5.92723473169142_1.24045976088195-2 chr2 175435430 175435792 + 1.24045976088195 NA intron (NM_001177543, intron 1 of 4) RMER17B|LTR|ERVK 158 NM_001100416 668030 Mm.289463 NM_001100416 Gm14432 OTTMUSG00000016609 predicted gene 14432 protein-coding unique_peak2_10_73_-0.576267934121354_5.92131939856827_1.24045976088194 chr7 80313751 80314474 + 1.24045976088194 NA intron (NM_001285997, intron 13 of 13) intron (NM_001285997, intron 13 of 13) 10342 NM_173445 269955 Mm.474502 NM_173445 ENSMUSG00000038930 Rccd1 5830436H09|E430018M08Rik RCC1 domain containing 1 protein-coding common_peak2_117_1003_-0.139404837722591_9.90184113508948_1.24038961379433 chr3 100161668 100163319 + 1.24038961379433 NA promoter-TSS (NM_010269) promoter-TSS (NM_010269) 30 NR_104341 14547 Mm.279228 NM_010269 ENSMUSG00000027865 Gdap2 C77050|D3Ertd801e ganglioside-induced differentiation-associated-protein 2 protein-coding common_peak2_117_1003_-0.139404837722591_9.90184113508948_1.24038961379433-2 chr6 56923173 56924876 + 1.24038961379433 NA promoter-TSS (NM_026004) promoter-TSS (NM_026004) -92 NM_026004 107569 Mm.158936 NM_026004 ENSMUSG00000029780 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III protein-coding common_peak1_72_442_0.19115613783061_8.88674095747032_1.23996666186829 chr13 114387215 114388226 + 1.23996666186829 NA intron (NM_010887, intron 1 of 4) intron (NM_010887, intron 1 of 4) 374 NM_010887 17993 Mm.253142 NM_010887 ENSMUSG00000021764 Ndufs4 6720411N02Rik|C1-18k NADH dehydrogenase (ubiquinone) Fe-S protein 4 protein-coding common_peak1_211_1745_0.0991285441863834_10.8194021157226_1.23978575989438 chr6 37870449 37872152 + 1.23978575989438 NA exon (NM_001272064, exon 1 of 19) exon (NM_001272064, exon 1 of 19) 489 NM_145076 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak2_61_476_-0.204550940084848_8.79556998596309_1.23967094164154 chr1 193443551 193445686 + 1.23967094164154 NA Intergenic Intergenic 62912 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA common_peak2_61_476_-0.204550940084848_8.79556998596309_1.23967094164154-2 chr11 80208833 80209895 + 1.23967094164154 NA intron (NM_021536, intron 1 of 18) CpG 309 NM_021536 59040 Mm.489674 NM_021536 ENSMUSG00000017686 Rhot1 2210403N23Rik|AA415293|AF244542|AI834919|Arht1|C430039G08Rik|Miro1 ras homolog family member T1 protein-coding common_peak2_87_564_0.170915307764114_9.22756471118461_1.23966973428829 chr13 37637264 37639439 + 1.23966973428829 NA Intergenic Intergenic -187687 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_161_1455_-0.114840246019462_10.450374517189_1.23965781518456 chr3 108199438 108201732 + 1.23965781518456 NA intron (NM_028061, intron 1 of 2) CpG 249 NM_028061 72023 Mm.246391 NM_028061 ENSMUSG00000048796 Cyb561d1 1600010M23Rik|AI605489|AW457162 cytochrome b-561 domain containing 1 protein-coding unique_peak2_11_79_-0.534764937981623_6.05454562589655_1.23949456788155 chr14 121264870 121265487 + 1.23949456788155 NA intron (NM_134082, intron 16 of 26) intron (NM_134082, intron 16 of 26) 114052 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_15_55_0.488898341067564_6.05180409259139_1.23949456788155 chr8 94634451 94634940 + 1.23949456788155 NA intron (NM_026274, intron 6 of 14) intron (NM_026274, intron 6 of 14) -31905 NM_024191 107566 Mm.393247 NM_024191 ENSMUSG00000031776 Arl2bp 1700010P10Rik|1700027H16Rik|6330544B05Rik|AI482273|AI849834|BART|Bart1 ADP-ribosylation factor-like 2 binding protein protein-coding unique_peak2_11_79_-0.534764937981623_6.05454562589655_1.23949456788155-3 chr9 21760472 21761154 + 1.23949456788155 NA promoter-TSS (NM_026282) promoter-TSS (NM_026282) -527 NM_026282 67629 Mm.295642 NM_026282 ENSMUSG00000074476 Spc24 2410030K01Rik|AV109292|Spbc24 SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) protein-coding common_peak2_15_55_0.488898341067564_6.05180409259139_1.23949456788155 chr2 175435422 175435845 + 1.23949456788155 NA intron (NM_001177543, intron 1 of 4) RMER17B|LTR|ERVK 136 NM_001100416 668030 Mm.289463 NM_001100416 Gm14432 OTTMUSG00000016609 predicted gene 14432 protein-coding common_peak1_11_79_-0.534764937981623_6.05454562589655_1.23949456788155 chr17 30104169 30104499 + 1.23949456788155 NA intron (NM_148926, intron 2 of 4) intron (NM_148926, intron 2 of 4) 99247 NM_148926 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding unique_peak2_11_79_-0.534764937981623_6.05454562589655_1.23949456788155-2 chr19 12800522 12801249 + 1.23949456788155 NA intron (NM_134152, intron 1 of 8) B1F|SINE|Alu 2276 NM_134152 107321 Mm.313136 NM_134152 ENSMUSG00000024696 Lpxn 4933402K05Rik|A530083L21Rik|AV278559|LDPL leupaxin protein-coding common_peak2_145_1085_0.124122949767624_10.1468698626882_1.2393005506444 chr8 34964174 34966416 + 1.2393005506444 NA exon (NM_175091, exon 1 of 27) exon (NM_175091, exon 1 of 27) 395 NM_175091 21951 Mm.88364 NM_175091 ENSMUSG00000031529 Tnks 4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase protein-coding common_peak1_103_701_0.153318646709083_9.5319865436591_1.23923382309904 chr12 83632198 83633330 + 1.23923382309904 NA intron (NM_027349, intron 1 of 18) CpG 530 NM_027349 67039 Mm.46005 NM_027349 ENSMUSG00000010608 Rbm25 2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7 RNA binding motif protein 25 protein-coding common_peak2_203_1662_0.1013229462129_10.7502339263937_1.23913070403266 chr4 57954137 57957687 + 1.23913070403266 NA intron (NM_011660, intron 1 of 4) CpG 499 NM_011660 22166 Mm.260618 NM_011660 ENSMUSG00000028367 Txn1 ADF|AW550880|Trx1|Txn thioredoxin 1 protein-coding common_peak1_189_1756_-0.103816374546808_10.726990288735_1.23878516076005 chr8 122566886 122568732 + 1.23878516076005 NA promoter-TSS (NM_026014) promoter-TSS (NM_026014) -206 NM_026014 67177 Mm.21873 NM_026014 ENSMUSG00000006585 Cdt1 2610318F11Rik|AW545653|C76791|Ris2 chromatin licensing and DNA replication factor 1 protein-coding common_peak2_55_311_0.227774842342033_8.39928964003327_1.23871712192918 chr4 125029799 125030818 + 1.23871712192918 NA intron (NM_145552, intron 1 of 15) intron (NM_145552, intron 1 of 15) 294 NM_145552 230737 Mm.90760 NM_145552 ENSMUSG00000028869 Gnl2 BC003262|HUMAUANTIG|Ngp-1 guanine nucleotide binding protein-like 2 (nucleolar) protein-coding common_peak1_25_110_0.361005378290826_6.97491855549552_1.23837576607787 chr4 123905003 123905559 + 1.23837576607787 NA exon (NM_019660, exon 2 of 5) exon (NM_019660, exon 2 of 5) 268 NM_019660 56309 Mm.446553 NM_019660 ENSMUSG00000028647 Mycbp 5730488M09Rik|AW552132|AW742590|Amy-1 MYC binding protein protein-coding common_peak1_20_143_-0.392450357643814_6.97369982262041_1.23837576607787 chr15 30610916 30611379 + 1.23837576607787 NA intron (NM_008729, intron 3 of 22) intron (NM_008729, intron 3 of 22) -427979 NR_045186 73784 Mm.66947 NR_045186 4930430F21Rik - RIKEN cDNA 4930430F21 gene ncRNA common_peak1_19_135_-0.396328613619563_6.88929853444056_1.23814607570018-4 chr17 34329607 34330085 + 1.23814607570018 NA intron (NM_001033978, intron 1 of 4) intron (NM_001033978, intron 1 of 4) 4171 NM_001033978 381091 Mm.139204 NM_001033978 ENSMUSG00000067341 H2-Eb2 A130038H09Rik|H-2Eb2|Ia-5|Ia5|Iebeta2 histocompatibility 2, class II antigen E beta2 protein-coding common_peak1_19_135_-0.396328613619563_6.88929853444056_1.23814607570018-3 chr13 113073275 113073694 + 1.23814607570018 NA intron (NM_001281487, intron 6 of 11) L1_Mur2|LINE|L1 -27096 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding unique_peak2_19_135_-0.396328613619563_6.88929853444056_1.23814607570018 chr3 94932895 94933640 + 1.23814607570018 NA intron (NM_009150, intron 1 of 11) intron (NM_009150, intron 1 of 11) 184 NM_009150 20341 Mm.196558 NM_009150 ENSMUSG00000068874 Selenbp1 Lp56|Lpsb|SBP56 selenium binding protein 1 protein-coding common_peak1_19_135_-0.396328613619563_6.88929853444056_1.23814607570018 chr12 41024081 41024575 + 1.23814607570018 NA intron (NM_053122, intron 1 of 6) CpG 238 NM_053122 93757 Mm.363813 NM_053122 ENSMUSG00000056899 Immp2l AI853880|IMP2 IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) protein-coding common_peak2_19_135_-0.396328613619563_6.88929853444056_1.23814607570018 chr10 91270391 91271259 + 1.23814607570018 NA Intergenic Intergenic -99206 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak1_19_135_-0.396328613619563_6.88929853444056_1.23814607570018-2 chr12 102363688 102364106 + 1.23814607570018 NA intron (NM_001161365, intron 5 of 9) intron (NM_001161365, intron 5 of 9) 75800 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding common_peak1_19_135_-0.396328613619563_6.88929853444056_1.23814607570018-5 chr2 156875978 156876425 + 1.23814607570018 NA intron (NM_029983, intron 5 of 7) intron (NM_029983, intron 5 of 7) 10877 NM_029983 77799 Mm.29264 NM_029983 ENSMUSG00000027636 Sla2 A930009E21Rik|AI430952|SLAP-2|SLAP2 Src-like-adaptor 2 protein-coding common_peak1_197_1844_-0.101338325947237_10.7987359379741_1.23804737007189 chr5 135961244 135963492 + 1.23804737007189 NA intron (NM_001160366, intron 9 of 10) intron (NM_001160366, intron 9 of 10) 12108 NM_001160366 109267 Mm.332750 NM_001160366 ENSMUSG00000029699 Ssc4d C330016E03Rik|S4D-SRCRB|SRCRB-S4D|Srcrb4d scavenger receptor cysteine rich family, 4 domains protein-coding common_peak1_184_1701_-0.105126083596232_10.6804522798878_1.23788524881083 chr1 165236059 165237675 + 1.23788524881083 NA promoter-TSS (NM_145513) promoter-TSS (NM_145513) 91 NM_145513 226591 Mm.21520 NM_145513 ENSMUSG00000040843 Tiprl 1810011K17Rik TIP41, TOR signalling pathway regulator-like (S. cerevisiae) protein-coding common_peak2_247_2409_-0.08829829282395_11.1906682847053_1.23756340094893 chr4 48072022 48077528 + 1.23756340094893 NA intron (NM_015743, intron 7 of 7) intron (NM_015743, intron 7 of 7) 23529 NM_001307989 18124 Mm.247261 NM_015743 ENSMUSG00000028341 Nr4a3 AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC nuclear receptor subfamily 4, group A, member 3 protein-coding common_peak2_95_632_0.160938401036466_9.38653088994657_1.23753429538062 chr18 80695151 80697753 + 1.23753429538062 NA intron (NM_198429, intron 2 of 9) intron (NM_198429, intron 2 of 9) 11721 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_292_2938_-0.0795159804584831_11.4813516534221_1.23705637133089 chr11 60725847 60729404 + 1.23705637133089 NA promoter-TSS (NM_022009) promoter-TSS (NM_022009) -362 NM_001302207 14248 Mm.339755 NM_022009 ENSMUSG00000002812 Flii 3632430F08Rik|Fliih flightless I actin binding protein protein-coding common_peak2_147_1307_-0.120138551913959_10.2930775495411_1.23702085245596 chr11 59207495 59209489 + 1.23702085245596 NA exon (NM_024210, exon 1 of 7) exon (NM_024210, exon 1 of 7) 131 NM_024210 67862 Mm.358708 NM_024210 ENSMUSG00000020441 2310033P09Rik Mmtag2 RIKEN cDNA 2310033P09 gene protein-coding common_peak1_31_226_-0.303682912979391_7.67470703080122_1.23693364387193 chr6 114929698 114930261 + 1.23693364387193 NA Intergenic Intergenic -8227 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_79_638_-0.175313270943507_9.23201548547524_1.23654759790642 chr6 149192765 149193716 + 1.23654759790642 NA Intergenic B2_Mm1t|SINE|B2 -4528 NM_001113424 232566 Mm.209147 NM_001113424 ENSMUSG00000068250 Amn1 5830467E07Rik|A230083D09|C730024G19Rik antagonist of mitotic exit network 1 protein-coding common_peak2_53_406_-0.220065106240297_8.5588524311461_1.23637188302725 chr4 129584293 129585601 + 1.23637188302725 NA Intergenic Intergenic -6367 NM_182783 230766 Mm.20377 NM_182783 ENSMUSG00000050493 Fam167b SEC family with sequence similarity 167, member B protein-coding common_peak2_499_5575_-0.0576694444810073_12.4161801236279_1.23635588125048 chr13 85500937 85511001 + 1.23635588125048 NA Intergenic (TTTTTG)n|Simple_repeat|Simple_repeat -216483 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak2_63_493_-0.198889346086798_8.84892255854128_1.23551304949839 chr2 60844169 60846901 + 1.23551304949839 NA intron (NM_020296, intron 1 of 13) MIRb|SINE|MIR 35903 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_165_1278_0.115317631473067_10.3784593646182_1.23485956659677 chr11 53890893 53893986 + 1.23485956659677 NA promoter-TSS (NM_011396) promoter-TSS (NM_011396) -736 NM_011396 20520 Mm.42253 NM_011396 ENSMUSG00000018900 Slc22a5 Lstpl|Octn2|jvs solute carrier family 22 (organic cation transporter), member 5 protein-coding common_peak1_302_3058_-0.0778616817994617_11.5399135506585_1.23448167003781 chr7 92873874 92875931 + 1.23448167003781 NA promoter-TSS (NM_001080995) promoter-TSS (NM_001080995) -351 NM_028243 72461 Mm.389969 NM_028243 ENSMUSG00000061119 Prcp 2510048K03Rik|2610104A14Rik|AI451719|HUMPCP|PCP prolylcarboxypeptidase (angiotensinase C) protein-coding common_peak1_70_556_-0.188373971493014_9.02734653159352_1.23446817840737 chr5 62857739 62858851 + 1.23446817840737 NA intron (NM_001170705, intron 7 of 8) intron (NM_001170705, intron 7 of 8) 44472 NM_001170705 100322896 Mm.479821 NM_001170705 ENSMUSG00000090326 Dthd1 Gm17384 death domain containing 1 protein-coding common_peak2_83_675_-0.170180170110973_9.3157893512267_1.233448282049 chr16 87353602 87354764 + 1.233448282049 NA promoter-TSS (NM_001159331) promoter-TSS (NM_001159331) -2 NM_001159331 67768 Mm.296532 NM_026366 ENSMUSG00000044442 N6amt1 5830445C04Rik|Hemk2|Pred28 N-6 adenine-specific DNA methyltransferase 1 (putative) protein-coding common_peak2_112_780_0.146340760030421_9.68234911815719_1.23342556015975 chr13 95374023 95376095 + 1.23342556015975 NA 5' UTR (NM_025630, exon 1 of 14) 5' UTR (NM_025630, exon 1 of 14) 298 NM_025630 66549 Mm.36785 NM_025630 ENSMUSG00000021681 Aggf1 2010009L17Rik|2310029P06Rik|AW112072|Peg3|VG5Q angiogenic factor with G patch and FHA domains 1 protein-coding common_peak1_85_693_-0.166452371137956_9.35556566700928_1.23323469631308 chr5 63967909 63968987 + 1.23323469631308 NA intron (NM_145923, intron 1 of 6) CpG 449 NM_145923 100532 Mm.243632 NM_145923 ENSMUSG00000047881 Rell1 AA536743 RELT-like 1 protein-coding common_peak1_167_1518_-0.111594577144517_10.5131088659298_1.23282255809266 chr10 26772019 26773697 + 1.23282255809266 NA intron (NM_176837, intron 1 of 14) intron (NM_176837, intron 1 of 14) 346 NM_176837 73910 Mm.356496 NM_176837 ENSMUSG00000039031 Arhgap18 4833419J07Rik|AI314906|AI843501 Rho GTPase activating protein 18 protein-coding common_peak2_78_490_0.182519876798624_9.03083915271401_1.23268266384298 chr8 79397942 79399824 + 1.23268266384298 NA intron (NM_008539, intron 1 of 6) CpG 585 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding common_peak1_37_185_0.287817703475215_7.68306766284564_1.23237454096909-2 chr4 155803672 155804160 + 1.23237454096909 NA exon (NM_025570, exon 2 of 4) exon (NM_025570, exon 2 of 4) 298 NM_025570 66448 Mm.23825 NM_025570 ENSMUSG00000029066 Mrpl20 2610008D01Rik|4930425I20Rik mitochondrial ribosomal protein L20 protein-coding common_peak1_37_185_0.287817703475215_7.68306766284564_1.23237454096909 chr1 21386941 21387748 + 1.23237454096909 NA TTS (NM_001113187) TTS (NM_001113187) 3788 NM_001113187 98582 Mm.326336 NM_001113187 ENSMUSG00000085079 Khdc1b AU014713|AU015226|AU024076|AY238603|C85331|C86372|C88118|Khdc1|Khdc1c KH domain containing 1B protein-coding common_peak1_99_826_-0.15250370466218_9.61549166684019_1.23145203838666 chrX 60404091 60404827 + 1.23145203838666 NA promoter-TSS (NM_001037863) promoter-TSS (NM_001037863) -478 NM_001037863 320940 Mm.490394 NM_001001798 ENSMUSG00000062949 Atp11c A330005H02Rik|AI315324|Ig ATPase, class VI, type 11C protein-coding common_peak1_18_128_-0.410863052026364_6.80579572941007_1.2314467837561 chr6 92094544 92094943 + 1.2314467837561 NA intron (NM_011630, intron 1 of 14) intron (NM_011630, intron 1 of 14) 3325 NM_011630 22026 Mm.87062 NM_011630 ENSMUSG00000005893 Nr2c2 TAK1|Tr4|mKIAA4145 nuclear receptor subfamily 2, group C, member 2 protein-coding unique_peak2_18_128_-0.410863052026364_6.80579572941007_1.2314467837561-2 chr4 108825111 108826242 + 1.2314467837561 NA intron (NM_027453, intron 3 of 5) intron (NM_027453, intron 3 of 5) 7908 NM_027453 70533 Mm.379178 NM_027453 ENSMUSG00000028568 Btf3l4 4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446 basic transcription factor 3-like 4 protein-coding common_peak1_18_128_-0.410863052026364_6.80579572941007_1.2314467837561-2 chr9 99129368 99129832 + 1.2314467837561 NA intron (NM_029094, intron 1 of 23) intron (NM_029094, intron 1 of 23) 10611 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding unique_peak2_18_128_-0.410863052026364_6.80579572941007_1.2314467837561 chr13 34652103 34653323 + 1.2314467837561 NA promoter-TSS (NR_105041) promoter-TSS (NR_105041) -32 NM_025831 66895 Mm.28943 NM_025831 ENSMUSG00000021411 Pxdc1 1300014I06Rik PX domain containing 1 protein-coding common_peak1_72_574_-0.185099119446109_9.07486858610868_1.23135714423325 chr6 91124411 91125533 + 1.23135714423325 NA Intergenic Intergenic -8146 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak1_57_326_0.222128800200842_8.4642112255985_1.23106473024994 chr14 40947063 40947902 + 1.23106473024994 NA intron (NM_145928, intron 1 of 8) intron (NM_145928, intron 1 of 8) 727 NM_001316748 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding common_peak2_97_807_-0.154722934654755_9.58085001542442_1.23081910576814 chr11 94327361 94329113 + 1.23081910576814 NA 5' UTR (NM_146024, exon 1 of 5) 5' UTR (NM_146024, exon 1 of 5) 236 NM_146024 71452 Mm.141054 NM_027799 ENSMUSG00000020864 Ankrd40 1110011C06Rik|5530600A18Rik|Gcap15 ankyrin repeat domain 40 protein-coding common_peak1_91_750_-0.160983671048049_9.47217726199025_1.23055679388201 chr9 57560860 57561666 + 1.23055679388201 NA intron (NM_022813, intron 1 of 8) intron (NM_022813, intron 1 of 8) 319 NM_022813 24044 Mm.286069 NM_022813 ENSMUSG00000040188 Scamp2 AI875466|Sc2 secretory carrier membrane protein 2 protein-coding common_peak1_24_104_0.371769674470261_6.90013035490125_1.23028976965671-4 chr9 45221759 45222311 + 1.23028976965671 NA intron (NM_001198971, intron 1 of 4) intron (NM_001198971, intron 1 of 4) -17960 NM_145403 214523 Mm.436756 NM_145403 ENSMUSG00000032091 Tmprss4 mCAP2 transmembrane protease, serine 4 protein-coding common_peak2_24_104_0.371769674470261_6.90013035490125_1.23028976965671-3 chrX 169880238 169881171 + 1.23028976965671 NA intron (NM_001290505, intron 1 of 9) intron (NM_001290505, intron 1 of 9) 1085 NM_001290505 17318 Mm.34441 NM_010797 ENSMUSG00000035299 Mid1 61B3-R|DXHXS1141|Fxy|Trim18 midline 1 protein-coding common_peak2_24_104_0.371769674470261_6.90013035490125_1.23028976965671 chr11 52341335 52342010 + 1.23028976965671 NA Intergenic Intergenic -19190 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding common_peak1_24_104_0.371769674470261_6.90013035490125_1.23028976965671 chr1 138169204 138169587 + 1.23028976965671 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 5731 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding unique_peak2_24_104_0.371769674470261_6.90013035490125_1.23028976965671 chr8 83733938 83734790 + 1.23028976965671 NA intron (NM_011925, intron 1 of 19) intron (NM_011925, intron 1 of 19) 6947 NM_001163029 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak1_24_104_0.371769674470261_6.90013035490125_1.23028976965671-2 chr2 72837769 72838191 + 1.23028976965671 NA Intergenic Intergenic -24263 NR_102349 76218 Mm.75260 NR_102348 ENSMUSG00000085427 6430710C18Rik 5033406J01Rik RIKEN cDNA 6430710C18 gene ncRNA common_peak1_24_104_0.371769674470261_6.90013035490125_1.23028976965671-3 chr5 113974878 113975364 + 1.23028976965671 NA intron (NM_198109, intron 2 of 14) intron (NM_198109, intron 2 of 14) 18636 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot homolog 1 (Drosophila) protein-coding common_peak2_24_104_0.371769674470261_6.90013035490125_1.23028976965671-2 chr2 29820100 29820900 + 1.23028976965671 NA Intergenic Intergenic -6889 NM_026615 68205 Mm.20273 NM_026615 ENSMUSG00000069020 Urm1 2900073H19Rik ubiquitin related modifier 1 protein-coding common_peak2_65_511_-0.196067741152763_8.90196612942362_1.23015095332643 chr10 76468320 76469729 + 1.23015095332643 NA promoter-TSS (NM_172550) promoter-TSS (NM_172550) 53 NM_019434 54387 Mm.30098 NM_019434 ENSMUSG00000001150 Mcm3ap GANP|mKIAA0572 minichromosome maintenance complex component 3 associated protein protein-coding common_peak1_373_3575_0.0693989641050621_11.8388305032358_1.22960482025398 chr9 108648213 108650291 + 1.22960482025398 NA 5' UTR (NM_011790, exon 1 of 16) 5' UTR (NM_011790, exon 1 of 16) 128 NM_011790 23807 Mm.290447 NM_011790 ENSMUSG00000064145 Arih2 AI843547|ARI2|TRIAD1|UIP48 ariadne RBR E3 ubiquitin protein ligase 2 protein-coding unique_peak2_44_330_-0.244508769242586_8.24843302218592_1.2295390146437 chr6 39334442 39336012 + 1.2295390146437 NA 3' UTR (NM_028123, exon 15 of 15) 3' UTR (NM_028123, exon 15 of 15) 42480 NM_028123 72144 Mm.482167 NM_028123 ENSMUSG00000029924 Slc37a3 2610507O21Rik|AU044904 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 protein-coding common_peak2_29_134_0.331840835546872_7.24273601482427_1.22893887564389 chr5 148495403 148496234 + 1.22893887564389 NA Intergenic Intergenic 56970 NM_011908 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG ubiquitin-like 3 protein-coding common_peak1_29_134_0.331840835546872_7.24273601482427_1.22893887564389-2 chr9 57789907 57790540 + 1.22893887564389 NA TTS (NM_019689) TTS (NM_019689) -24363 NM_007713 102414 Mm.25720 NM_007713 ENSMUSG00000032316 Clk3 AI256811 CDC-like kinase 3 protein-coding common_peak1_29_134_0.331840835546872_7.24273601482427_1.22893887564389 chr4 145249604 145250200 + 1.22893887564389 NA Intergenic Intergenic -3032 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak2_12_86_-0.514134562394151_6.18587621465165_1.22877789289095 chr11 52309455 52310159 + 1.22877789289095 NA Intergenic Intergenic -26793 NM_001313981 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding unique_peak2_12_86_-0.514134562394151_6.18587621465165_1.22877789289095-2 chrX 95968074 95968788 + 1.22877789289095 NA Intergenic CpG -11457 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding common_peak2_244_2097_0.090182861211737_11.0798903931831_1.22874731497783 chr8 71366380 71368404 + 1.22874731497783 NA intron (NM_001145780, intron 2 of 8) CpG 175 NM_025917 67023 Mm.41890 NM_025917 ENSMUSG00000002395 Use1 2010315L10Rik|5730403H22Rik|AV002165|D12|Ed2|Q-snare|p31 unconventional SNARE in the ER 1 homolog (S. cerevisiae) protein-coding common_peak1_34_249_-0.284338570138553_7.82361499959281_1.2284697732541 chr14 121894755 121895493 + 1.2284697732541 NA intron (NM_026861, intron 1 of 8) intron (NM_026861, intron 1 of 8) -15716 NR_130999 78312 Mm.188743 NR_130999 ENSMUSG00000102112 1810041H14Rik - RIKEN cDNA 1810041H14 gene ncRNA unique_peak2_40_205_0.274942737882207_7.82397189612432_1.2284697732541 chr2 101816409 101818075 + 1.2284697732541 NA intron (NM_001110849, intron 2 of 9) RMER30|DNA|hAT-Charlie -19535 NM_001083810 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak2_156_1191_0.118307113943487_10.2783220774339_1.22834394379861 chr9 114688130 114689752 + 1.22834394379861 NA exon (NM_146229, exon 1 of 13) exon (NM_146229, exon 1 of 13) 110 NM_146229 235661 Mm.128627 NM_146229 ENSMUSG00000032435 Dync1li1 1110053F02Rik|Dnclic1|LIC-1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding common_peak1_125_1082_-0.132596056470188_10.0145194993732_1.22826333059726 chr7 31086639 31088237 + 1.22826333059726 NA Intergenic Intergenic -10741 NM_008557 17178 Mm.263847 NM_008557 ENSMUSG00000057092 Fxyd3 Mat8 FXYD domain-containing ion transport regulator 3 protein-coding unique_peak2_41_306_-0.258007890385324_8.13309090017752_1.2282604526835 chr12 113100853 113102582 + 1.2282604526835 NA intron (NM_054081, intron 1 of 19) intron (NM_054081, intron 1 of 19) 3439 NM_054081 116870 Mm.212577 NM_054081 ENSMUSG00000021144 Mta1 - metastasis associated 1 protein-coding common_peak1_153_1370_-0.117679003819804_10.3621733538693_1.22757721881132 chr4 95165223 95167440 + 1.22757721881132 NA Intergenic ORR1E|LTR|ERVL-MaLR -114109 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak1_218_2077_-0.094526396365298_10.9737167407216_1.22748354539904 chr7 44553165 44554798 + 1.22748354539904 NA promoter-TSS (NM_001285517) promoter-TSS (NM_001285517) -16 NM_001285517 22260 Mm.968 NM_009473 ENSMUSG00000060601 Nr1h2 AI194859|LXR|LXRB|LXRBSV|LXRbeta|NER1|OR-1|RIP15|UR|Unr|Unr2 nuclear receptor subfamily 1, group H, member 2 protein-coding common_peak1_71_434_0.193038393509289_8.86139078749073_1.2274707740962 chr13 104287933 104289240 + 1.2274707740962 NA intron (NM_001081020, intron 1 of 24) intron (NM_001081020, intron 1 of 24) 713 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak1_60_467_-0.205845268536432_8.76744208531519_1.22733431207249 chr8 117532651 117533482 + 1.22733431207249 NA intron (NM_172285, intron 2 of 32) intron (NM_172285, intron 2 of 32) 34775 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak2_84_540_0.172157064025676_9.16556331583965_1.22683826356001 chr16 78489741 78491239 + 1.22683826356001 NA Intergenic Intergenic -69826 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak2_163_1475_-0.112809118622257_10.4710724467493_1.22643104049806 chr10 70094825 70098212 + 1.22643104049806 NA promoter-TSS (NM_001111121) promoter-TSS (NM_001111121) -603 NM_001111121 76551 Mm.281741 NM_001111121 ENSMUSG00000048701 Ccdc6 2810012H18Rik|AA536681|AA960498|AW061011 coiled-coil domain containing 6 protein-coding common_peak2_233_1979_0.0924055619805291_10.9974874959572_1.22626975823747 chr3 33798823 33800886 + 1.22626975823747 NA promoter-TSS (NM_001290500) promoter-TSS (NM_001290500) -329 NM_027619 67120 Mm.275710 NM_025978 ENSMUSG00000027677 Ttc14 2700016E08Rik|4930434D01Rik|4931403I22Rik|4933402I15Rik|AI662468|AU014779|AW561908|cI-44|mKIAA1980 tetratricopeptide repeat domain 14 protein-coding common_peak2_139_1224_-0.123895696993687_10.1966181853931_1.22612767205813 chr1 182356527 182359856 + 1.22612767205813 NA Intergenic Intergenic -16585 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_17_121_-0.426051975690219_6.71771134971778_1.22598306904269-2 chr6 41540140 41540549 + 1.22598306904269 NA Intergenic Intergenic 18568 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding unique_peak2_17_121_-0.426051975690219_6.71771134971778_1.22598306904269 chr4 155150518 155151515 + 1.22598306904269 NA Intergenic CpG 64439 NM_001081100 76866 Mm.200590 NM_001081100 ENSMUSG00000029049 Morn1 2900057D20Rik|4930417P05Rik|AU042805 MORN repeat containing 1 protein-coding common_peak1_17_121_-0.426051975690219_6.71771134971778_1.22598306904269 chr11 106165410 106165932 + 1.22598306904269 NA intron (NM_028126, intron 8 of 10) intron (NM_028126, intron 8 of 10) -5529 NM_172397 67803 Mm.21687 NM_172397 ENSMUSG00000040699 Limd2 0610025L06Rik|AI413966 LIM domain containing 2 protein-coding common_peak1_88_573_0.168111442088501_9.24896264771994_1.22578189588395 chr15 86070582 86071868 + 1.22578189588395 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 12498 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak2_67_529_-0.193087666103679_8.95330471639872_1.22560541816146 chr1 33669077 33670836 + 1.22560541816146 NA promoter-TSS (NM_008922) promoter-TSS (NM_008922) 132 NR_033199 67503 Mm.87069 NM_026204 ENSMUSG00000103746 1700001G17Rik - RIKEN cDNA 1700001G17 gene ncRNA common_peak1_117_826_0.140395197056906_9.76194111769973_1.22547017003225 chr2 5951054 5952257 + 1.22547017003225 NA intron (NM_001081132, intron 1 of 21) CpG 186 NM_001081132 326622 Mm.31102 NM_001081132 ENSMUSG00000043241 Upf2 - UPF2 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak2_292_2937_-0.0790250173634313_11.4811061718746_1.22533062737425 chr5 36370814 36375610 + 1.22533062737425 NA intron (NM_030889, intron 1 of 26) intron (NM_030889, intron 1 of 26) 24927 NM_030889 81840 Mm.34113 NM_030889 ENSMUSG00000029093 Sorcs2 N28137|mKIAA1329 sortilin-related VPS10 domain containing receptor 2 protein-coding unique_peak2_46_247_0.248934777039143_8.07866369890645_1.22531651043157 chr4 129839253 129841007 + 1.22531651043157 NA intron (NM_001164745, intron 2 of 5) RSINE1|SINE|B4 19422 NM_001164745 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding common_peak2_46_247_0.248934777039143_8.07866369890645_1.22531651043157 chr3 144198330 144199356 + 1.22531651043157 NA intron (NM_010723, intron 2 of 4) CpG 3489 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_43_226_0.259861566589392_7.95647927058561_1.2250042866021 chr14 120276341 120277090 + 1.2250042866021 NA intron (NM_175341, intron 1 of 8) intron (NM_175341, intron 1 of 8) 1046 NM_175341 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind-like 2 protein-coding common_peak2_54_304_0.228625585935667_8.36697822541808_1.22481497866162 chr10 6955935 6957456 + 1.22481497866162 NA intron (NM_001033391, intron 2 of 7) intron (NM_001033391, intron 2 of 7) 23770 NM_001170800 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak2_94_624_0.160757410725763_9.36809108491233_1.22477020711055 chr6 135362874 135365524 + 1.22477020711055 NA intron (NM_001288628, intron 1 of 5) intron (NM_001288628, intron 1 of 5) 1268 NM_001288628 13730 Mm.182785 NM_010128 ENSMUSG00000030208 Emp1 I-8-09|TMP epithelial membrane protein 1 protein-coding common_peak2_92_607_0.162889207444005_9.32937211716559_1.22475153151392 chr13 49340758 49342428 + 1.22475153151392 NA promoter-TSS (NM_001039180) promoter-TSS (NM_001039180) 44 NM_001039180 76895 Mm.197387 NM_029791 ENSMUSG00000037933 Bicd2 - bicaudal D homolog 2 (Drosophila) protein-coding common_peak1_159_1220_0.117123676202441_10.3124093230886_1.22450451739705 chr7 25278429 25280930 + 1.22450451739705 NA intron (NM_001302811, intron 2 of 20) intron (NM_001302811, intron 2 of 20) -2500 NM_027882 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak1_227_2179_-0.0923890777414016_11.0439178807936_1.22426629229286 chr3 35754037 35756005 + 1.22426629229286 NA intron (NM_029570, intron 1 of 29) intron (NM_029570, intron 1 of 29) 883 NM_029570 76295 Mm.239416 NM_029570 ENSMUSG00000037400 Atp11b 1110019I14Rik|ATPIF|ATPIR|mKIAA0956 ATPase, class VI, type 11B protein-coding common_peak2_126_908_0.134074209979937_9.89517358918408_1.2241920409564 chr15 37457855 37459964 + 1.2241920409564 NA intron (NM_001170867, intron 1 of 4) intron (NM_001170867, intron 1 of 4) 473 NM_001170867 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak1_25_180_-0.344424642442274_7.32763356586207_1.22340815828258-2 chr2 150786223 150786666 + 1.22340815828258 NA promoter-TSS (NM_153781) promoter-TSS (NM_153781) -352 NM_153781 110078 Mm.222584 NM_153781 ENSMUSG00000033059 Pygb - brain glycogen phosphorylase protein-coding common_peak1_25_180_-0.344424642442274_7.32763356586207_1.22340815828258-3 chr4 152449345 152449800 + 1.22340815828258 NA promoter-TSS (NM_001252655) promoter-TSS (NM_001252655) -717 NM_001252656 16498 Mm.388924 NM_010598 ENSMUSG00000028931 Kcnab2 F5|I2rf5|Kcnb3|kv-beta-2 potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein-coding unique_peak2_25_180_-0.344424642442274_7.32763356586207_1.22340815828258 chr1 72582676 72583772 + 1.22340815828258 NA promoter-TSS (NM_018817) promoter-TSS (NM_018817) -27 NM_018817 54380 Mm.274232 NM_018817 ENSMUSG00000039354 Smarcal1 6030401P21Rik|AI851716|Mharp SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 protein-coding common_peak1_25_180_-0.344424642442274_7.32763356586207_1.22340815828258 chr11 116071170 116071771 + 1.22340815828258 NA intron (NM_001009573, intron 13 of 32) B1_Mur1|SINE|Alu 6491 NM_001009573 70450 Mm.259460 NM_001009573 ENSMUSG00000057948 Unc13d 2610108D09Rik|Jinx|Munc13-4|mFLJ00067 unc-13 homolog D (C. elegans) protein-coding unique_peak2_23_98_0.384418848012485_6.82156604408585_1.22319747501642 chr16 33261066 33261936 + 1.22319747501642 NA intron (NM_080557, intron 1 of 13) RMER1C|Other|Other 10045 NM_080557 69150 Mm.28196 NM_080557 ENSMUSG00000022808 Snx4 1810036H14Rik|AI037066 sorting nexin 4 protein-coding common_peak1_23_98_0.384418848012485_6.82156604408585_1.22319747501642 chr5 142903482 142904001 + 1.22319747501642 NA 3' UTR (NM_007393, exon 6 of 6) 3' UTR (NM_007393, exon 6 of 6) 3013 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_62_484_-0.200231777122708_8.82172504851314_1.22306831376039-2 chr15 76948206 76949130 + 1.22306831376039 NA 5' UTR (NM_054099, exon 1 of 4) 5' UTR (NM_054099, exon 1 of 4) 124 NM_054099 117171 Mm.322968 NM_054099 ENSMUSG00000063236 1110038F14Rik - RIKEN cDNA 1110038F14 gene protein-coding common_peak1_62_484_-0.200231777122708_8.82172504851314_1.22306831376039 chr12 28749627 28750568 + 1.22306831376039 NA intron (NM_001161410, intron 1 of 11) intron (NM_001161410, intron 1 of 11) 297 NM_001161410 217449 Mm.132006 NM_178811 ENSMUSG00000020628 Trappc12 CGI-87|D930014A20Rik|Ttc15 trafficking protein particle complex 12 protein-coding common_peak1_13_93_-0.494636412846067_6.3072706452546_1.22255807342442-2 chr9 21137394 21137806 + 1.22255807342442 NA TTS (NM_016742) TTS (NM_016742) -6325 NM_001205312 54721 Mm.20249 NM_018793 ENSMUSG00000032175 Tyk2 JTK1 tyrosine kinase 2 protein-coding unique_peak2_13_93_-0.494636412846067_6.3072706452546_1.22255807342442 chr9 107555915 107556773 + 1.22255807342442 NA intron (NM_019713, intron 1 of 4) B2_Mm2|SINE|B2 1761 NM_019713 56289 Mm.12091 NM_019713 ENSMUSG00000010067 Rassf1 123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family member 1 protein-coding common_peak1_13_93_-0.494636412846067_6.3072706452546_1.22255807342442 chr15 60144750 60145091 + 1.22255807342442 NA Intergenic L1_Mus3|LINE|L1 -128302 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_57_440_-0.209359219858596_8.67995523562822_1.22251782706506-2 chr2 158360490 158362267 + 1.22251782706506 NA intron (NR_015463, intron 1 of 5) CpG 131 NR_015463 68108 Mm.119198 NR_015463 Snhg17 9430008C03Rik small nucleolar RNA host gene 17 ncRNA common_peak2_57_440_-0.209359219858596_8.67995523562822_1.22251782706506 chr13 43170789 43172211 + 1.22251782706506 NA promoter-TSS (NM_001252640) promoter-TSS (NM_001252640) 1 NM_001252639 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak2_104_874_-0.147558976042871_9.69935971869825_1.22220928981604 chr15 96654319 96655922 + 1.22220928981604 NA Intergenic ORR1E|LTR|ERVL-MaLR -12207 NM_001166458 105727 Mm.103568 NM_134086 ENSMUSG00000023169 Slc38a1 AA408026|AA409865|AL022800|AU015942|NAT2 solute carrier family 38, member 1 protein-coding common_peak1_16_114_-0.441953789970203_6.62451315595927_1.22199866533737 chr1 169968806 169969294 + 1.22199866533737 NA promoter-TSS (NR_040438) promoter-TSS (NR_040438) 155 NM_010476 15490 Mm.12882 NM_010476 ENSMUSG00000026675 Hsd17b7 AI266814|ERG27 hydroxysteroid (17-beta) dehydrogenase 7 protein-coding common_peak1_16_114_-0.441953789970203_6.62451315595927_1.22199866533737-2 chr5 21413212 21413606 + 1.22199866533737 NA intron (NM_029195, intron 1 of 18) intron (NM_029195, intron 1 of 18) 11268 NM_029195 75172 Mm.426695 NM_029195 ENSMUSG00000064280 Ccdc146 4930528G09Rik|mKIAA1505 coiled-coil domain containing 146 protein-coding unique_peak2_16_114_-0.441953789970203_6.62451315595927_1.22199866533737-2 chr8 105609216 105610027 + 1.22199866533737 NA intron (NM_001081241, intron 1 of 21) L2|LINE|L2 4392 NM_001081241 75687 Mm.41261 NM_001081241 ENSMUSG00000038604 Fam65a 2310066E14Rik|AI837433 family with sequence similarity 65, member A protein-coding common_peak2_16_114_-0.441953789970203_6.62451315595927_1.22199866533737 chr17 26244338 26244942 + 1.22199866533737 NA promoter-TSS (NM_207217) promoter-TSS (NM_207217) -398 NM_001206335 106581 Mm.28844 NM_207217 ENSMUSG00000024187 Fam234a Itfg3 family with sequence similarity 234, member A protein-coding unique_peak2_16_114_-0.441953789970203_6.62451315595927_1.22199866533737 chr16 78264787 78265653 + 1.22199866533737 NA Intergenic Intergenic -9766 NR_045698 100503619 Mm.387531 NR_045698 ENSMUSG00000109841 E330011O21Rik - RIKEN cDNA E330011O21 gene ncRNA common_peak1_75_466_0.186310086059942_8.96043378273963_1.22189070773255 chr10 39435152 39436471 + 1.22189070773255 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 66012 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_300_2721_0.0788119280154262_11.4498573155117_1.22142209521965 chr6 127581314 127584084 + 1.22142209521965 NA intron (NM_001033464, intron 1 of 6) intron (NM_001033464, intron 1 of 6) 4724 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding unique_peak2_37_273_-0.271055568377281_7.96250429877189_1.22129788461054 chr16 76323141 76324710 + 1.22129788461054 NA intron (NM_173440, intron 3 of 3) intron (NM_173440, intron 3 of 3) 49124 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak2_135_1183_-0.126080171095708_10.1464132800811_1.22084108571796 chr11 69631995 69633878 + 1.22084108571796 NA promoter-TSS (NM_011814) promoter-TSS (NM_011814) -35 NM_011814 23879 Mm.41930 NM_011814 ENSMUSG00000018765 Fxr2 Fxr2h fragile X mental retardation, autosomal homolog 2 protein-coding common_peak1_131_954_0.13118764711048_9.96495074647835_1.22032148306438 chr16 44173091 44174128 + 1.22032148306438 NA intron (NM_001029889, intron 1 of 7) CpG 212 NM_001029889 207806 Mm.310566 NM_001029889 ENSMUSG00000068284 Usf3 5530400K22Rik|Gm1779|Gm608|mKIAA2018 upstream transcription factor family member 3 protein-coding common_peak2_138_1019_0.127631343933743_10.0581691088257_1.22011216906123 chr10 77581002 77582692 + 1.22011216906123 NA promoter-TSS (NM_145925) promoter-TSS (NM_145925) 80 NM_145925 108705 Mm.28853 NM_145925 ENSMUSG00000009291 Pttg1ip 1810010L20Rik|AI314311|AU018448|C79540 pituitary tumor-transforming 1 interacting protein protein-coding common_peak1_203_1909_-0.0984615234229427_10.8501261612116_1.21995060273635 chr5 139165048 139167900 + 1.21995060273635 NA intron (NM_001081265, intron 7 of 12) intron (NM_001081265, intron 7 of 12) 16251 NM_001081265 433956 Mm.5547 NM_001081265 ENSMUSG00000025857 Dnaaf5 BC053401|C76907|Heatr2 dynein, axonemal assembly factor 5 protein-coding unique_peak2_14_100_-0.476167361340447_6.42012780208157_1.21981219304439 chr1 54584924 54585711 + 1.21981219304439 NA Intergenic Intergenic -27633 NM_001163314 241062 Mm.103539 NM_175508 ENSMUSG00000073678 Pgap1 5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto post-GPI attachment to proteins 1 protein-coding unique_peak2_14_100_-0.476167361340447_6.42012780208157_1.21981219304439-3 chr13 24608564 24609165 + 1.21981219304439 NA intron (NM_001286100, intron 1 of 22) intron (NM_001286100, intron 1 of 22) -4097 NR_024599 76024 Mm.440710 NR_024599 Gm11346 5830431A10Rik|AI447617|Gm11347|OTTMUSG00000000601|OTTMUSG00000000602 X-linked lymphocyte-regulated 5 pseudogene pseudo unique_peak2_14_100_-0.476167361340447_6.42012780208157_1.21981219304439-2 chr11 69008070 69008925 + 1.21981219304439 NA promoter-TSS (NM_001159519) promoter-TSS (NM_001159519) -37 NM_001159519 237823 Mm.340288 NM_001159519 ENSMUSG00000020899 Pfas 4432409B16Rik|FGAMS|FGAR-AT|FGARAT|Gm18|PURL|Sofa phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) protein-coding unique_peak2_15_107_-0.4586342390383_6.52557038264432_1.21980598889429 chr3 137850121 137850932 + 1.21980598889429 NA Intergenic ORR1D2|LTR|ERVL-MaLR -13961 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding unique_peak2_15_107_-0.4586342390383_6.52557038264432_1.21980598889429-2 chr6 49013249 49014259 + 1.21980598889429 NA Intergenic Intergenic -14138 NR_126454 75347 Mm.207324 NR_126454 ENSMUSG00000107656 4930563H07Rik - RIKEN cDNA 4930563H07 gene ncRNA unique_peak2_15_107_-0.4586342390383_6.52557038264432_1.21980598889429-3 chr9 73059539 73060416 + 1.21980598889429 NA intron (NM_023635, intron 1 of 5) intron (NM_023635, intron 1 of 5) -4171 NM_001301232 11891 Mm.34867 NM_023635 ENSMUSG00000032202 Rab27a 2210402C08Rik|2410003M20Rik|4933437C11Rik|ash RAB27A, member RAS oncogene family protein-coding common_peak2_49_372_-0.230404316932496_8.42782966178899_1.21965218622052 chr7 27928728 27930064 + 1.21965218622052 NA promoter-TSS (NM_028538) promoter-TSS (NM_028538) 34 NM_028538 73430 Mm.379224 NM_028538 ENSMUSG00000070709 Zfp974 1700049G17Rik|AV321011|BB026409 zinc finger protein 974 protein-coding common_peak2_90_740_-0.160984689585787_9.45283738751294_1.21914339272723 chr7 132575321 132576954 + 1.21914339272723 NA intron (NM_016978, intron 1 of 9) CpG 261 NM_016978 18242 Mm.13694 NM_016978 ENSMUSG00000030934 Oat AI194874|rhg ornithine aminotransferase protein-coding common_peak2_115_982_-0.139159669455299_9.87146777161293_1.21872054037701 chr7 99140455 99142115 + 1.21872054037701 NA promoter-TSS (NM_178635) promoter-TSS (NM_178635) -141 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak2_217_2065_-0.0942699921490675_10.9654895427905_1.21863866587518 chr3 84823648 84828446 + 1.21863866587518 NA intron (NM_001177773, intron 1 of 13) intron (NM_001177773, intron 1 of 13) 10470 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak2_270_2383_0.0842990128852446_11.2613180269048_1.21822162526618 chr2 143837366 143842010 + 1.21822162526618 NA intron (NM_001291061, intron 5 of 7) intron (NM_001291061, intron 5 of 7) 23485 NM_009751 12075 Mm.275937 NM_009751 ENSMUSG00000027420 Bfsp1 CP95 beaded filament structural protein 1, in lens-CP94 protein-coding common_peak2_77_483_0.180692523519623_9.00920949903441_1.2182191724625 chr5 110057384 110058696 + 1.2182191724625 NA Intergenic Intergenic -41929 NM_207279 403178 Mm.297057 NM_207279 ENSMUSG00000064247 Plcxd1 A330045H12Rik|Gm576 phosphatidylinositol-specific phospholipase C, X domain containing 1 protein-coding common_peak2_120_853_0.138474585014958_9.80732955212797_1.21805900580233 chr7 45509408 45511177 + 1.21805900580233 NA intron (NM_001163662, intron 1 of 12) CpG 116 NM_008749 18220 Mm.258923 NM_008749 ENSMUSG00000030824 Nucb1 B230337F23Rik|C77483|Calnuc|MTEST82|Nucb nucleobindin 1 protein-coding common_peak2_36_179_0.287930554881735_7.63581837377054_1.21749521286618-2 chr4 24966047 24967179 + 1.21749521286618 NA Intergenic CpG -6806 NM_030733 81006 Mm.160412 NM_030733 ENSMUSG00000040372 Gpr63 PSP24beta|Psp24-2 G protein-coupled receptor 63 protein-coding common_peak1_36_179_0.287930554881735_7.63581837377054_1.21749521286618 chr14 26970626 26971279 + 1.21749521286618 NA promoter-TSS (NM_145221) promoter-TSS (NM_145221) -401 NM_145221 72993 Mm.202322 NM_145221 ENSMUSG00000040760 Appl1 2900057D21Rik|7330406P05Rik|AI585782|AW209077|BB022931|C88264|DIP13 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 protein-coding common_peak2_36_179_0.287930554881735_7.63581837377054_1.21749521286618 chr4 7454844 7455883 + 1.21749521286618 NA Intergenic Intergenic -105325 NR_040645 71510 Mm.410775 NR_040645 ENSMUSG00000086070 8430436N08Rik - RIKEN cDNA 8430436N08 gene ncRNA unique_peak2_36_179_0.287930554881735_7.63581837377054_1.21749521286618 chr11 70579535 70580696 + 1.21749521286618 NA intron (NM_176893, intron 1 of 31) ID2|SINE|ID 17234 NM_016713 50932 Mm.42967 NM_016713 ENSMUSG00000020827 Mink1 B55|MINK|Map4k6|Ysk2 misshapen-like kinase 1 (zebrafish) protein-coding common_peak1_28_128_0.337436059089314_7.17994528496791_1.21735457175568 chr4 140954315 140954986 + 1.21735457175568 NA intron (NR_045911, intron 1 of 3) B2_Mm2|SINE|B2 3252 NR_045911 100126227 Mm.404073 NR_045911 ENSMUSG00000087698 Gm13031 OTTMUSG00000010081 predicted gene 13031 ncRNA common_peak1_298_2698_0.0792564577014918_11.4378374903176_1.21720300677741 chr10 18021709 18023706 + 1.21720300677741 NA intron (NM_028440, intron 1 of 2) CpG 545 NM_028440 73112 Mm.276041 NM_028440 ENSMUSG00000078453 Abracl 1700028I04Rik|3110003A17Rik ABRA C-terminal like protein-coding common_peak1_33_241_-0.288714665114068_7.77450590471756_1.2170886381868 chr9 70891459 70892174 + 1.2170886381868 NA intron (NM_008280, intron 1 of 8) intron (NM_008280, intron 1 of 8) 42992 NM_008280 15450 Mm.390187 NM_008280 ENSMUSG00000032207 Lipc AI256194|HL|Hpl lipase, hepatic protein-coding common_peak2_33_241_-0.288714665114068_7.77450590471756_1.2170886381868 chr18 12634261 12635453 + 1.2170886381868 NA Intergenic Intergenic -8676 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding common_peak2_29_210_-0.312442756109482_7.56487781065244_1.21703016201846 chr17 25133298 25134133 + 1.21703016201846 NA intron (NM_011930, intron 1 of 24) intron (NM_011930, intron 1 of 24) 321 NM_011930 26373 Mm.270587 NM_011930 ENSMUSG00000036636 Clcn7 ClC-7|D17Wsu51e chloride channel, voltage-sensitive 7 protein-coding common_peak2_56_319_0.222570624662811_8.43321340721877_1.21699179094414 chr8 119604465 119605450 + 1.21699179094414 NA intron (NM_021441, intron 1 of 14) intron (NM_021441, intron 1 of 14) 283 NM_021441 21341 Mm.41977 NM_021441 ENSMUSG00000031832 Taf1c Tafi95|mTAFI95 TATA-box binding protein associated factor, RNA polymerase I, C protein-coding common_peak1_56_319_0.222570624662811_8.43321340721877_1.21699179094414 chr13 32929112 32930171 + 1.21699179094414 NA Intergenic Lx3C|LINE|L1 -31501 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak2_54_414_-0.215676507848372_8.5891292723101_1.21692555141066 chr3 96277546 96278807 + 1.21692555141066 NA Intergenic CpG 8476 NM_175666 319189 Mm.297655 NM_175666 ENSMUSG00000105827 Hist2h2bb H2b-616 histone cluster 2, H2bb protein-coding common_peak2_79_499_0.178574565341401_9.05507156733279_1.21691541632185 chr4 155177602 155179878 + 1.21691541632185 NA intron (NM_011385, intron 1 of 6) B3|SINE|B2 43795 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_24_172_-0.348613035500341_7.26032170988655_1.21683238448138 chr10 98785644 98786435 + 1.21683238448138 NA Intergenic Intergenic -129113 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding unique_peak2_24_172_-0.348613035500341_7.26032170988655_1.21683238448138-2 chr16 49155833 49157104 + 1.21683238448138 NA intron (NM_001166210, intron 30 of 40) intron (NM_001166210, intron 30 of 40) 98982 NM_001166210 667772 Mm.301387 NM_001166210 ENSMUSG00000092009 Myh15 EG667772 myosin, heavy chain 15 protein-coding unique_peak2_24_172_-0.348613035500341_7.26032170988655_1.21683238448138 chr10 118141777 118142616 + 1.21683238448138 NA intron (NM_001162904, intron 1 of 14) CpG 409 NM_010785 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak2_68_411_0.196094793063576_8.78454792371501_1.21682705432015 chr11 75167021 75169271 + 1.21682705432015 NA promoter-TSS (NM_001098203) promoter-TSS (NM_001098203) 6 NM_001098203 15248 Mm.57250 NM_010430 ENSMUSG00000043099 Hic1 AA408311|HIC-1 hypermethylated in cancer 1 protein-coding common_peak1_81_515_0.176828320828529_9.09964141583752_1.21608617018164 chr5 35582775 35583785 + 1.21608617018164 NA non-coding (NR_045807, exon 4 of 4) non-coding (NR_045807, exon 4 of 4) 220 NM_030721 80911 Mm.291503 NM_030721 ENSMUSG00000029098 Acox3 BI685180|EST-s59|PCOX acyl-Coenzyme A oxidase 3, pristanoyl protein-coding common_peak2_81_515_0.176828320828529_9.09964141583752_1.21608617018164 chr11 118129614 118131256 + 1.21608617018164 NA Intergenic Intergenic -1216 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak1_43_322_-0.248980300813617_8.21090020428712_1.21603168459946 chr9 95512045 95512786 + 1.21603168459946 NA promoter-TSS (NM_001114977) promoter-TSS (NM_001114977) -419 NM_001114977 67958 Mm.292742 NM_026476 ENSMUSG00000032407 U2surp 2610101N10Rik|AU023006|Sr140 U2 snRNP-associated SURP domain containing protein-coding common_peak1_111_942_-0.141324588284458_9.81045166653287_1.21601616249003 chr9 20520801 20522042 + 1.21601616249003 NA promoter-TSS (NM_001135019) promoter-TSS (NM_001135019) -2 NM_001082485 77519 Mm.431849 NM_001082485 ENSMUSG00000060510 Zfp266 5330440G10Rik|5730601F06Rik|AW552317 zinc finger protein 266 protein-coding common_peak1_59_458_-0.207081599629747_8.73880954359893_1.21501533148845 chr10 77625447 77626355 + 1.21501533148845 NA intron (NM_019803, intron 1 of 5) L1M5|LINE|L1 3580 NM_019803 22213 Mm.458125 NM_019803 ENSMUSG00000009293 Ube2g2 1110003O05Rik|D10Xrf369|UBC7|Ubc7p ubiquitin-conjugating enzyme E2G 2 protein-coding common_peak1_32_153_0.310533406965979_7.42205324417789_1.21440631887575-2 chr13 114818058 114818628 + 1.21440631887575 NA intron (NM_001113374, intron 1 of 5) CpG 106 NM_001113374 17434 Mm.19027 NM_013826 ENSMUSG00000015536 Mocs2 AI415403 molybdenum cofactor synthesis 2 protein-coding common_peak1_32_153_0.310533406965979_7.42205324417789_1.21440631887575-3 chr6 48698461 48699247 + 1.21440631887575 NA Intergenic Intergenic 9390 NM_153175 231931 Mm.321047 NM_153175 ENSMUSG00000047867 Gimap6 4833419H03Rik|Ian6|mFLJ00102 GTPase, IMAP family member 6 protein-coding common_peak1_32_153_0.310533406965979_7.42205324417789_1.21440631887575 chr13 100124660 100125325 + 1.21440631887575 NA intron (NM_011420, intron 1 of 8) CpG 137 NM_011420 20595 Mm.2025 NM_011420 ENSMUSG00000021645 Smn1 AI849087|Gemin1|Smn survival motor neuron 1 protein-coding common_peak1_85_548_0.171677142435106_9.18650091022275_1.21411880097628 chr10 99460639 99461879 + 1.21411880097628 NA Intergenic Intergenic -147912 NR_038019 100504202 Mm.403801 NR_038019 Gm20110 - predicted gene, 20110 ncRNA common_peak2_83_532_0.172707543412034_9.14434549446519_1.21407326233754 chr16 95701474 95703121 + 1.21407326233754 NA promoter-TSS (NM_011809) promoter-TSS (NM_011809) -110 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding common_peak2_99_667_0.155535522035043_9.46147205349157_1.21393273862801 chr4 32159832 32161822 + 1.21393273862801 NA Intergenic ORR1A3|LTR|ERVL-MaLR 196720 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_39_199_0.273890349042408_7.78080136429593_1.21292090095892 chr6 120190836 120191565 + 1.21292090095892 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) 97820 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak2_42_219_0.264367456729291_7.91354344188931_1.21275159200796 chr13 48929158 48930570 + 1.21275159200796 NA intron (NM_001033268, intron 5 of 17) intron (NM_001033268, intron 5 of 17) 37964 NM_001033268 218236 Mm.426571 NM_001033268 ENSMUSG00000038014 Fam120a C9orf10|Ossa family with sequence similarity 120, member A protein-coding common_peak1_42_219_0.264367456729291_7.91354344188931_1.21275159200796 chr17 65950526 65951342 + 1.21275159200796 NA intron (NM_023053, intron 1 of 4) CpG 253 NM_023053 65960 Mm.10153 NM_023053 ENSMUSG00000024098 Twsg1 1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg twisted gastrulation BMP signaling modulator 1 protein-coding common_peak1_63_372_0.206446065242643_8.64625485287656_1.2126526895655-2 chr9 41112737 41113512 + 1.2126526895655 NA intron (NM_176860, intron 1 of 13) B4|SINE|B4 44370 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak1_63_372_0.206446065242643_8.64625485287656_1.2126526895655 chr17 34627623 34628415 + 1.2126526895655 NA promoter-TSS (NM_019441) promoter-TSS (NM_019441) -3 NM_001302394 54397 Mm.373627 NM_019441 ENSMUSG00000015474 Ppt2 0610007M19Rik|AA672937 palmitoyl-protein thioesterase 2 protein-coding common_peak2_63_372_0.206446065242643_8.64625485287656_1.2126526895655 chr12 38778503 38780378 + 1.2126526895655 NA promoter-TSS (NM_007960) promoter-TSS (NM_007960) -818 NM_007960 14009 Mm.4866 NM_007960 ENSMUSG00000004151 Etv1 ER81|Etsrp81 ets variant 1 protein-coding common_peak1_77_619_-0.176568644480021_9.18784008303423_1.21255341493428 chr11 101171614 101172611 + 1.21255341493428 NA promoter-TSS (NM_146030) promoter-TSS (NM_146030) -810 NM_146030 217198 Mm.273254 NM_146030 ENSMUSG00000035172 Plekhh3 BC020025 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 protein-coding common_peak2_77_619_-0.176568644480021_9.18784008303423_1.21255341493428 chr14 77873657 77875433 + 1.21255341493428 NA intron (NM_025384, intron 1 of 5) intron (NM_025384, intron 1 of 5) 372 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding unique_peak2_45_240_0.252183779049903_8.03898122575491_1.21244586701121 chr12 25251313 25253128 + 1.21244586701121 NA Intergenic MTEa|LTR|ERVL-MaLR 123046 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_114_799_0.142710201197104_9.71521129037328_1.21234299444735 chr4 139597764 139599568 + 1.21234299444735 NA intron (NM_001205173, intron 1 of 8) MLTR14|LTR|ERV1 23946 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak1_148_1316_-0.118114628148893_10.3039823161821_1.21220135879075 chr7 127273292 127274382 + 1.21220135879075 NA exon (NM_009266, exon 1 of 1) exon (NM_009266, exon 1 of 1) 222 NM_009266 20768 Mm.20294 NM_009266 ENSMUSG00000049091 Sephs2 Sps2|Ysg3 selenophosphate synthetase 2 protein-coding common_peak2_233_1980_0.0916771120580151_10.9978517209185_1.21207885946065 chr17 87444538 87447945 + 1.21207885946065 NA intron (NM_007589, intron 1 of 5) CpG 694 NM_007589 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017 calmodulin 2 protein-coding common_peak1_472_5212_-0.058789561214212_12.3185033639889_1.21178450184558 chr11 32552208 32555877 + 1.21178450184558 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 20776 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_79_637_-0.173053763761381_9.23088573188418_1.21148353978025 chr2 11359167 11361857 + 1.21148353978025 NA intron (NR_040615, intron 1 of 2) intron (NR_040615, intron 1 of 2) 21023 NR_040369 100503147 Mm.91961 NR_040369 ENSMUSG00000086006 Gm13293 OTTMUSG00000011311 predicted gene 13293 ncRNA common_peak1_132_964_0.129515180506917_9.9791427224089_1.21121325392492 chr3 105958519 105960002 + 1.21121325392492 NA promoter-TSS (NM_027432) promoter-TSS (NM_027432) -238 NM_027432 70465 Mm.5110 NM_027432 ENSMUSG00000000561 Wdr77 2610003I18Rik|2610312E17Rik|C79984|p44/MEP50 WD repeat domain 77 protein-coding common_peak2_425_4212_0.0632741726244035_12.0722692868745_1.21113577195742 chr10 39368308 39373102 + 1.21113577195742 NA intron (NM_008054, intron 1 of 13) C-rich|Low_complexity|Low_complexity 906 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak2_23_164_-0.352546746153721_7.19004884116896_1.21106966988188 chr11 74562319 74563643 + 1.21106966988188 NA intron (NM_001015046, intron 2 of 24) MIR|SINE|MIR 27177 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_23_164_-0.352546746153721_7.19004884116896_1.21106966988188 chr15 62178382 62178987 + 1.21106966988188 NA intron (NR_132746, intron 3 of 6) MIRc|SINE|MIR 40767 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo common_peak1_53_297_0.229651357563789_8.33399419924406_1.21094002573757 chr6 125131294 125132533 + 1.21094002573757 NA promoter-TSS (NM_138747) promoter-TSS (NM_138747) 30 NM_138747 110109 Mm.29203 NM_138747 ENSMUSG00000038279 Nop2 120kDa|A530002O17|Nol1 NOP2 nucleolar protein protein-coding common_peak1_81_655_-0.169496428366301_9.27280379043493_1.21082542788018 chr5 115018002 115019608 + 1.21082542788018 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 7281 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak1_358_3743_-0.0692716203358898_11.8357289094155_1.21072353152138 chr4 32237989 32240516 + 1.21072353152138 NA Intergenic CpG -178183 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_173_1581_-0.108123742620583_10.5734720131625_1.21063583943444 chr1 36261042 36263478 + 1.21063583943444 NA Intergenic PB1D7|SINE|Alu 11165 NM_153408 214854 Mm.389110 NM_153408 ENSMUSG00000047180 Neurl3 2010300P06Rik|Lincr neuralized E3 ubiquitin protein ligase 3 protein-coding common_peak2_242_2077_0.0894966602419522_11.0657282690252_1.21048212370053 chr7 144580821 144583600 + 1.21048212370053 NA exon (NM_010175, exon 1 of 2) exon (NM_010175, exon 1 of 2) 226 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding common_peak2_51_389_-0.225296757922322_8.49468193478845_1.21044274753913 chr2 173082439 173084467 + 1.21044274753913 NA Intergenic B1_Mur2|SINE|Alu 36072 NM_001081387 664799 Mm.389396 NM_001081387 ENSMUSG00000070495 Ctcfl Boris|OTTMUSG00000016680 CCCTC-binding factor (zinc finger protein)-like protein-coding common_peak2_125_1081_-0.131263312688677_10.0138531274825_1.20907225314163 chr15 58133551 58135719 + 1.20907225314163 NA intron (NM_027435, intron 1 of 27) CpG 447 NM_027435 70472 Mm.221758 NM_027435 ENSMUSG00000022360 Atad2 2610509G12Rik ATPase family, AAA domain containing 2 protein-coding common_peak1_22_93_0.383871952415872_6.74652482788557_1.2087417330447 chr10 18915764 18916297 + 1.2087417330447 NA Intergenic Intergenic 70959 NM_022032 64058 Mm.28209 NM_022032 ENSMUSG00000019851 Perp 1110017A08Rik|KCP1|KRTCAP1|PIGPC1|THW PERP, TP53 apoptosis effector protein-coding common_peak1_22_93_0.383871952415872_6.74652482788557_1.2087417330447-2 chr19 47855043 47855651 + 1.2087417330447 NA intron (NM_010362, intron 2 of 5) CpG-7635 358 NM_010362 14873 Mm.378931 NM_010362 ENSMUSG00000025068 Gsto1 AA407097|AI194287|AU018802|Gsto-1|Gstx|Spg-r|p28 glutathione S-transferase omega 1 protein-coding common_peak1_97_806_-0.152936315180741_9.57995670568741_1.20858524168568 chr5 124922233 124923657 + 1.20858524168568 NA Intergenic Intergenic 60240 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak1_48_363_-0.230918403288012_8.39233543855469_1.20830883152045-2 chr8 109705366 109706093 + 1.20830883152045 NA promoter-TSS (NM_029468) promoter-TSS (NM_029468) 183 NM_001167946 75871 Mm.180410 NM_029468 ENSMUSG00000031728 Zfp821 4930566A11Rik|Znf821 zinc finger protein 821 protein-coding common_peak1_48_363_-0.230918403288012_8.39233543855469_1.20830883152045 chr19 44562802 44563383 + 1.20830883152045 NA intron (NM_176958, intron 1 of 7) intron (NM_176958, intron 1 of 7) 238 NM_176958 319594 Mm.145278 NM_176958 ENSMUSG00000036450 Hif1an 2310046M24Rik|A830014H24Rik|FIH|FIH1 hypoxia-inducible factor 1, alpha subunit inhibitor protein-coding common_peak1_95_787_-0.155051728991568_9.54452595496059_1.20795129688614 chr8 120562757 120564654 + 1.20795129688614 NA intron (NM_198671, intron 3 of 15) intron (NM_198671, intron 3 of 15) 25009 NR_106159 102466849 NR_106159 ENSMUSG00000098280 Mir7687 Gm27573|mmu-mir-7687 microRNA 7687 ncRNA common_peak2_70_555_-0.18578152687649_9.02605030928526_1.2076626058381-2 chr3 122292795 122294217 + 1.2076626058381 NA TTS (NR_030439) TTS (NR_030439) 197 NR_030439 791077 NR_030439 ENSMUSG00000076456 Mir760 Mirn760|mir-760|mmu-mir-760 microRNA 760 ncRNA common_peak2_70_555_-0.18578152687649_9.02605030928526_1.2076626058381 chr2 146511229 146512277 + 1.2076626058381 NA intron (NM_001033348, intron 1 of 40) CpG 251 NM_001033348 241694 Mm.222310 NM_001033348 ENSMUSG00000037110 Ralgapa2 A230067G21Rik|AS250|BC053994|RGC2|pp250 Ral GTPase activating protein, alpha subunit 2 (catalytic) protein-coding unique_peak2_28_202_-0.316672602672608_7.50699961584887_1.20763903246709 chr10 117835499 117837083 + 1.20763903246709 NA intron (NM_024457, intron 1 of 7) intron (NM_024457, intron 1 of 7) 9683 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak1_28_202_-0.316672602672608_7.50699961584887_1.20763903246709 chr6 29272109 29272565 + 1.20763903246709 NA promoter-TSS (NM_023516) promoter-TSS (NM_023516) -151 NM_001190461 69573 Mm.45161 NM_023516 ENSMUSG00000043421 Hilpda 2310016C08Rik|AW049004|Hig2 hypoxia inducible lipid droplet associated protein-coding common_peak1_93_768_-0.157096389349451_9.5082915932871_1.20758330096467 chr18 65405075 65406418 + 1.20758330096467 NA intron (NR_105742, intron 3 of 6) intron (NR_105742, intron 3 of 6) -11858 NM_001037294 225638 Mm.296528 NM_001037294 ENSMUSG00000032845 Alpk2 Gm549|Hak alpha-kinase 2 protein-coding common_peak2_35_172_0.296669445422299_7.58296295034787_1.20745355849457-3 chr5 64969423 64970492 + 1.20745355849457 NA promoter-TSS (NR_030577) promoter-TSS (NR_030577) -118 NM_026667 68303 Mm.258545 NM_026667 ENSMUSG00000029185 Fam114a1 1190001N04Rik|9130005N14Rik|Noxp20 family with sequence similarity 114, member A1 protein-coding common_peak2_35_172_0.296669445422299_7.58296295034787_1.20745355849457 chr1 43450241 43451800 + 1.20745355849457 NA intron (NM_010879, intron 1 of 4) MTC|LTR|ERVL-MaLR 5269 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak2_35_172_0.296669445422299_7.58296295034787_1.20745355849457-2 chr13 21765594 21767026 + 1.20745355849457 NA Intergenic Intergenic 12187 NM_178201 319187 NM_178201 ENSMUSG00000095217 Hist1h2bn - histone cluster 1, H2bn protein-coding common_peak2_74_459_0.184659657345291_8.93781987961702_1.20741067009615 chr16 32443739 32445668 + 1.20741067009615 NA intron (NM_001163160, intron 1 of 8) RLTR48A|LTR|ERV1 13473 NM_001163160 13026 Mm.98775 NM_009981 ENSMUSG00000005615 Pcyt1a CTalpha|Cctalpha|Ctpct|Cttalpha phosphate cytidylyltransferase 1, choline, alpha isoform protein-coding common_peak1_154_1173_0.117571098502575_10.2560022423613_1.20652586426262 chr7 116333395 116334840 + 1.20652586426262 NA promoter-TSS (NM_026533) promoter-TSS (NM_026533) 73 NM_026533 68052 Mm.14798 NM_026533 ENSMUSG00000090862 Rps13 2700063M04Rik ribosomal protein S13 protein-coding common_peak1_154_1173_0.117571098502575_10.2560022423613_1.20652586426262-2 chr9 114688287 114689558 + 1.20652586426262 NA promoter-TSS (NM_146229) promoter-TSS (NM_146229) 91 NM_146229 235661 Mm.128627 NM_146229 ENSMUSG00000032435 Dync1li1 1110053F02Rik|Dnclic1|LIC-1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding common_peak1_27_122_0.344050244678686_7.11453962767858_1.20625221064085 chr2 73466656 73467252 + 1.20625221064085 NA intron (NM_153138, intron 1 of 7) intron (NM_153138, intron 1 of 7) -13065 NM_001289722 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak2_32_233_-0.293044771922525_7.72384233362214_1.20592770525178 chr4 151044844 151045609 + 1.20592770525178 NA promoter-TSS (NM_001289878) promoter-TSS (NM_001289878) -561 NM_001289878 18628 Mm.121361 NM_011067 ENSMUSG00000028957 Per3 2810049O06Rik|mPer3 period circadian clock 3 protein-coding unique_peak2_32_233_-0.293044771922525_7.72384233362214_1.20592770525178 chr13 83524113 83525773 + 1.20592770525178 NA intron (NM_001170537, intron 2 of 10) intron (NM_001170537, intron 2 of 10) 20909 NM_025282 17260 Mm.24001 NM_025282 ENSMUSG00000005583 Mef2c 5430401D19Rik|9930028G15Rik|AV011172|Mef2 myocyte enhancer factor 2C protein-coding common_peak2_32_233_-0.293044771922525_7.72384233362214_1.20592770525178-2 chr9 108578073 108579235 + 1.20592770525178 NA promoter-TSS (NM_031392) promoter-TSS (NM_031392) 16 NM_031392 83669 Mm.335454 NM_031392 ENSMUSG00000066357 Wdr6 mWDR6 WD repeat domain 6 protein-coding common_peak2_45_338_-0.240068347856479_8.2851072892081_1.20571550210844-2 chr9 70891180 70892598 + 1.20571550210844 NA intron (NM_008280, intron 1 of 8) intron (NM_008280, intron 1 of 8) 42919 NM_008280 15450 Mm.390187 NM_008280 ENSMUSG00000032207 Lipc AI256194|HL|Hpl lipase, hepatic protein-coding common_peak2_45_338_-0.240068347856479_8.2851072892081_1.20571550210844 chr3 19258674 19260246 + 1.20571550210844 NA intron (NM_008802, intron 2 of 12) RLTR12A|LTR|ERVK 5548 NM_008802 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak2_42_313_-0.248893578637677_8.17017395957279_1.20570764859775 chr8 116992689 116993695 + 1.20570764859775 NA intron (NM_026572, intron 1 of 4) CpG 257 NM_026572 68133 Mm.258462 NM_026572 ENSMUSG00000034424 Gcsh 1100001L02Rik|5730591C18Rik glycine cleavage system protein H (aminomethyl carrier) protein-coding common_peak1_42_313_-0.248893578637677_8.17017395957279_1.20570764859775 chr9 46283003 46283687 + 1.20570764859775 NA TTS (NM_011752) TTS (NM_011752) 333 NM_146000 215051 Mm.32648 NM_146000 ENSMUSG00000032077 Bud13 AV305342|D030060M11Rik BUD13 homolog protein-coding unique_peak2_42_313_-0.248893578637677_8.17017395957279_1.20570764859775 chr8 36111615 36113516 + 1.20570764859775 NA intron (NM_172911, intron 3 of 5) intron (NM_172911, intron 3 of 5) 17737 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak2_135_992_0.127723287004867_10.0195115510308_1.20557239353257 chr12 98258468 98260175 + 1.20557239353257 NA exon (NM_008079, exon 1 of 17) exon (NM_008079, exon 1 of 17) 138 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding common_peak1_76_475_0.181903777465124_8.9857696520405_1.20553758784947 chr7 131409814 131410498 + 1.20553758784947 NA promoter-TSS (NM_025826) promoter-TSS (NM_025826) 322 NM_175115 67143 Mm.334273 NM_175115 ENSMUSG00000040167 Ikzf5 2610034F18Rik|PEGASUS|Zfpn1a5 IKAROS family zinc finger 5 protein-coding common_peak2_76_475_0.181903777465124_8.9857696520405_1.20553758784947 chr9 35175247 35176556 + 1.20553758784947 NA promoter-TSS (NM_027030) promoter-TSS (NM_027030) 86 NM_027030 69305 Mm.229110 NM_027030 ENSMUSG00000032040 Dcps 1700001E16Rik|AA408441 decapping enzyme, scavenger protein-coding common_peak2_252_2186_0.0871047121732698_11.1382898611347_1.20505835669002 chr2 11776757 11779257 + 1.20505835669002 NA promoter-TSS (NM_015792) promoter-TSS (NM_015792) 254 NM_177268 320816 Mm.260201 NM_177268 ENSMUSG00000047909 Ankrd16 2810455F06Rik|AI646698|D430029B21Rik ankyrin repeat domain 16 protein-coding common_peak1_174_1591_-0.107073319141795_10.5830879609728_1.20470544778683 chr2 121955440 121957091 + 1.20470544778683 NA promoter-TSS (NM_008545) promoter-TSS (NM_008545) -173 NM_008545 17147 Mm.389349 NM_008545 ENSMUSG00000074881 Mageb3 Mage-b3|Mage-ps1|Mage-rs3|Smage3 melanoma antigen, family B, 3 protein-coding common_peak2_78_491_0.179584585774077_9.03230679822628_1.20419758086287 chr12 73964103 73965435 + 1.20419758086287 NA intron (NM_178392, intron 1 of 9) CpG 239 NM_178392 75627 Mm.25937 NM_178392 ENSMUSG00000021113 Snapc1 2700033G17Rik|AU015787 small nuclear RNA activating complex, polypeptide 1 protein-coding common_peak2_0_0_1.38980401837974_0.694902009189872_1.20411998265592 chr3 145690941 145691165 + 1.20411998265592 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -41068 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding unique_peak2_0_0_1.38980401837974_0.694902009189872_1.20411998265592-2 chr2 178940896 178941109 + 1.20411998265592 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -473934 NM_026596 68175 Mm.158187 NM_026596 4930591A17Rik - RIKEN cDNA 4930591A17 gene protein-coding unique_peak2_0_0_1.38980401837974_0.694902009189872_1.20411998265592 chr19 44607005 44607223 + 1.20411998265592 NA Intergenic (CATTC)n|Simple_repeat|Simple_repeat 44260 NM_176958 319594 Mm.145278 NM_176958 ENSMUSG00000036450 Hif1an 2310046M24Rik|A830014H24Rik|FIH|FIH1 hypoxia-inducible factor 1, alpha subunit inhibitor protein-coding unique_peak2_0_0_1.38980401837974_0.694902009189872_1.20411998265592-3 chr7 55510802 55511016 + 1.20411998265592 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -257275 NM_001310740 233274 Mm.44425 NM_178706 ENSMUSG00000051504 Siglech 6430529G09Rik|Siglec-H sialic acid binding Ig-like lectin H protein-coding common_peak2_212_1758_0.0967542945283402_10.8289169147361_1.2039831258121 chr10 128409018 128412374 + 1.2039831258121 NA promoter-TSS (NM_027257) promoter-TSS (NM_027257) -900 NM_027257 69917 Mm.46614 NM_027257 ENSMUSG00000025374 Nabp2 2610036N15Rik|Obfc2b|SSB1 nucleic acid binding protein 2 protein-coding unique_peak2_21_87_0.400366124056654_6.65961468066562_1.20372514721227-4 chr3 153717815 153718667 + 1.20372514721227 NA intron (NM_011372, intron 1 of 4) intron (NM_011372, intron 1 of 4) 6892 NM_011372 20447 Mm.296453 NM_011372 ENSMUSG00000052544 St6galnac3 Siat7c ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding common_peak1_21_87_0.400366124056654_6.65961468066562_1.20372514721227-2 chr18 36415204 36415733 + 1.20372514721227 NA intron (NM_026027, intron 3 of 3) intron (NM_026027, intron 3 of 3) 39027 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding unique_peak2_21_87_0.400366124056654_6.65961468066562_1.20372514721227 chr12 86803461 86804331 + 1.20372514721227 NA Intergenic MIRc|SINE|MIR 69527 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak2_21_87_0.400366124056654_6.65961468066562_1.20372514721227 chr1 40392700 40393429 + 1.20372514721227 NA Intergenic Intergenic -36506 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_21_87_0.400366124056654_6.65961468066562_1.20372514721227-3 chrX 71215180 71215614 + 1.20372514721227 NA intron (NM_019926, intron 1 of 14) intron (NM_019926, intron 1 of 14) 315 NM_019926 17772 Mm.274981 NM_019926 ENSMUSG00000031337 Mtm1 AF073996|Mtm|mKIAA4176 X-linked myotubular myopathy gene 1 protein-coding unique_peak2_21_87_0.400366124056654_6.65961468066562_1.20372514721227-3 chr17 34347392 34348190 + 1.20372514721227 NA Intergenic Intergenic -3146 NM_010381 100504404 Mm.15680 NM_010381 H2-Ea-ps AI323765|E-alpha-f|H-2Ea|H2-Ea|I-Ealpha|Ia-3|Ia3|MHC-H2-Ea histocompatibility 2, class II antigen E alpha, pseudogene protein-coding common_peak1_21_87_0.400366124056654_6.65961468066562_1.20372514721227 chr17 44459565 44460163 + 1.20372514721227 NA Intergenic Intergenic 271292 NM_172621 224796 Mm.37666 NM_172621 ENSMUSG00000023959 Clic5 5730531E12Rik|B330005L24|Gm322|jbg chloride intracellular channel 5 protein-coding common_peak2_21_87_0.400366124056654_6.65961468066562_1.20372514721227-2 chr14 105732273 105733090 + 1.20372514721227 NA Intergenic Intergenic -108911 NR_105814 102465207 NR_105814 ENSMUSG00000098780 Mir6390 Gm27562|mmu-mir-6390 microRNA 6390 ncRNA unique_peak2_21_87_0.400366124056654_6.65961468066562_1.20372514721227-2 chr15 96543097 96543775 + 1.20372514721227 NA Intergenic Intergenic -82593 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak2_243_2360_-0.0874382528089601_11.1614631998242_1.20368767126984 chr11 69120848 69124745 + 1.20368767126984 NA exon (NM_033041, exon 4 of 4) exon (NM_033041, exon 4 of 4) 2343 NM_033041 84653 Mm.98505 NM_033041 ENSMUSG00000023781 Hes7 bHLHb37 hairy and enhancer of split 7 (Drosophila) protein-coding common_peak1_133_973_0.129378049253738_9.99246698670921_1.20316885178866 chr12 98258598 98260071 + 1.20316885178866 NA 5' UTR (NM_008079, exon 1 of 17) 5' UTR (NM_008079, exon 1 of 17) 125 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding common_peak1_55_312_0.223158214271663_8.40159795406845_1.20293722070384 chr16 17910600 17911389 + 1.20293722070384 NA intron (NM_022408, intron 1 of 9) intron (NM_022408, intron 1 of 9) 354 NM_022408 27886 Mm.256480 NM_022408 ENSMUSG00000003527 Dgcr14 AI462402|D16H22S1269E|Dgcr1|Dgsi|ES2|Es2el DiGeorge syndrome critical region gene 14 protein-coding common_peak1_106_892_-0.14354594576545_9.7307433922385_1.2026858907343 chr1 193172681 193174288 + 1.2026858907343 NA promoter-TSS (NM_001160360) promoter-TSS (NM_001160360) 15 NM_001160360 319266 Mm.482460 NM_181048 ENSMUSG00000079144 A130010J15Rik - RIKEN cDNA A130010J15 gene protein-coding common_peak1_177_1623_-0.105705237234632_10.6124832985679_1.20226530993513 chr17 48409823 48411231 + 1.20226530993513 NA promoter-TSS (NM_010913) promoter-TSS (NM_010913) 527 NM_207219 106821 Mm.203943 NM_207219 ENSMUSG00000040771 Oard1 AI314976|AW558560 O-acyl-ADP-ribose deacylase 1 protein-coding common_peak1_218_1821_0.0951462987368625_10.8788803931705_1.20189237304312 chr9 79792299 79794652 + 1.20189237304312 NA promoter-TSS (NM_133718) promoter-TSS (NM_133718) -45 NM_133718 69981 Mm.486324 NM_133718 ENSMUSG00000032328 Tmem30a 2010200I23Rik|AW540225|Cdc50a|D9Wsu20e transmembrane protein 30A protein-coding common_peak1_76_609_-0.175943891677182_9.16469348661166_1.20134356856282 chr13 38527371 38528553 + 1.20134356856282 NA promoter-TSS (NM_001289599) promoter-TSS (NM_001289599) -48 NM_001289599 105245 Mm.28622 NM_145367 ENSMUSG00000038991 Txndc5 AL022641|ERp46|PC-TRP thioredoxin domain containing 5 protein-coding common_peak2_193_1797_-0.100226630964682_10.7620639900321_1.20130126567417 chr12 111037962 111040593 + 1.20130126567417 NA promoter-TSS (NM_198023) promoter-TSS (NM_198023) -521 NM_198023 217864 Mm.23808 NM_198023 ENSMUSG00000037896 Rcor1 5730409O11|6720480E22Rik|AU042633|D12Wsu95e|Rocr1|mKIAA0071 REST corepressor 1 protein-coding unique_peak2_35_256_-0.274326876134856_7.86846111112645_1.20064236444587 chr15 39172715 39174143 + 1.20064236444587 NA Intergenic IAPEz-int|LTR|ERVK -24857 NM_001256382 116838 Mm.309296 NM_053271 ENSMUSG00000037386 Rims2 2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751 regulating synaptic membrane exocytosis 2 protein-coding common_peak1_256_2230_0.0861268509125352_11.1665382237004_1.2005456814076 chr18 46740987 46743193 + 1.2005456814076 NA promoter-TSS (NM_026217) promoter-TSS (NM_026217) 214 NM_001303015 11777 Mm.312536 NM_009681 ENSMUSG00000024480 Ap3s1 - adaptor-related protein complex 3, sigma 1 subunit protein-coding common_peak2_167_1516_-0.109693792889466_10.5121584738023_1.20044908186785 chr14 77903487 77906415 + 1.20044908186785 NA intron (NM_178825, intron 1 of 6) intron (NM_178825, intron 1 of 6) 712 NM_029495 108670 Mm.68134 NM_029495 ENSMUSG00000022014 Epsti1 2310046K10Rik|5033415K03Rik|BRESI1 epithelial stromal interaction 1 (breast) protein-coding common_peak1_167_1516_-0.109693792889466_10.5121584738023_1.20044908186785 chr17 12362945 12365105 + 1.20044908186785 NA Intergenic Intergenic -14584 NM_008877 18815 Mm.971 NM_008877 ENSMUSG00000059481 Plg AI649309|Pg plasminogen protein-coding common_peak2_96_642_0.156663436035462_9.40700664534568_1.20027503757145-2 chr9 75440673 75442300 + 1.20027503757145 NA promoter-TSS (NM_001039522) promoter-TSS (NM_001039522) -38 NM_001039522 235497 Mm.41508 NM_001006122 ENSMUSG00000042487 Leo1 Gm185 Leo1, Paf1/RNA polymerase II complex component protein-coding common_peak2_96_642_0.156663436035462_9.40700664534568_1.20027503757145 chr6 35373248 35375153 + 1.20027503757145 NA Intergenic Intergenic 43354 NR_040526 73409 Mm.69443 NR_040526 ENSMUSG00000107341 1700065J11Rik - RIKEN cDNA 1700065J11 gene ncRNA common_peak1_86_557_0.168676518836666_9.20845957124752_1.20022104835296 chr2 68873034 68874119 + 1.20022104835296 NA intron (NM_172856, intron 1 of 9) intron (NM_172856, intron 1 of 9) 12019 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_84_541_0.169492806498621_9.16689544460318_1.19977728623773 chr15 67038964 67040921 + 1.19977728623773 NA Intergenic Intergenic -70301 NM_008681 17988 Mm.30837 NM_008681 ENSMUSG00000005125 Ndrg1 CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5 N-myc downstream regulated gene 1 protein-coding unique_peak2_22_157_-0.365319944083593_7.12112077613531_1.19975414105294 chr2 11212254 11213118 + 1.19975414105294 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 40304 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_102_854_-0.148232725996522_9.665664246775_1.19938028730779 chr9 14498174 14499377 + 1.19938028730779 NA intron (NM_173433, intron 1 of 1) MIR|SINE|MIR 1707 NM_173433 244694 Mm.240457 NM_173433 ENSMUSG00000053914 Kdm4d 4932416A15|Jmjd2d lysine (K)-specific demethylase 4D protein-coding common_peak2_92_608_0.160518302981258_9.33055756939696_1.19924334842929 chr18 31759182 31760671 + 1.19924334842929 NA promoter-TSS (NM_001242430) promoter-TSS (NM_001242430) 102 NM_153515 225339 Mm.290804 NM_153515 ENSMUSG00000041915 Ammecr1l 5430429D03Rik|AU022236|AU040755|AW111353|E230022H04Rik AMME chromosomal region gene 1-like protein-coding common_peak1_90_591_0.162891677091098_9.2908992041745_1.19920432713186 chr9 107580138 107581471 + 1.19920432713186 NA promoter-TSS (NM_178020) promoter-TSS (NM_178020) -492 NM_178020 109685 Mm.447916 NM_178020 ENSMUSG00000036091 Hyal3 Hyl3 hyaluronoglucosaminidase 3 protein-coding common_peak1_122_872_0.135739937589269_9.83770781242407_1.19901277787251 chr4 15265186 15266707 + 1.19901277787251 NA 5' UTR (NM_181401, exon 1 of 3) 5' UTR (NM_181401, exon 1 of 3) 126 NM_181401 100201 Mm.394111 NM_181401 ENSMUSG00000043252 Tmem64 9630015D15Rik|AI790744|AV300874 transmembrane protein 64 protein-coding common_peak1_124_1070_-0.130621985735553_9.99943177188248_1.19876090277809 chr15 5107569 5108844 + 1.19876090277809 NA exon (NM_001163138, exon 2 of 4) exon (NM_001163138, exon 2 of 4) 327 NM_001163138 239319 Mm.31252 NM_001163138 ENSMUSG00000041849 Card6 D730008L15 caspase recruitment domain family, member 6 protein-coding unique_peak2_27_194_-0.320765563731685_7.44694753188377_1.19868590522079 chr2 151996355 151997143 + 1.19868590522079 NA intron (NM_027172, intron 1 of 4) RSINE1|SINE|B4 238 NM_027172 69698 Mm.258262 NM_027172 ENSMUSG00000027463 Slc52a3 2310046K01Rik|RFT2 solute carrier protein family 52, member 3 protein-coding common_peak1_27_194_-0.320765563731685_7.44694753188377_1.19868590522079 chr7 81345386 81345718 + 1.19868590522079 NA promoter-TSS (NM_009092) promoter-TSS (NM_009092) -318 NM_009092 20068 Mm.42767 NM_009092 ENSMUSG00000061787 Rps17 - ribosomal protein S17 protein-coding common_peak1_55_422_-0.211336791915668_8.61884545716212_1.19827204907317 chr11 11518835 11519855 + 1.19827204907317 NA Intergenic Intergenic 30079 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak2_62_365_0.20590932166774_8.61865449911791_1.19827204907317 chr17 24723525 24724610 + 1.19827204907317 NA intron (NM_026684, intron 1 of 3) CpG 321 NM_026684 68342 Mm.1129 NM_026684 ENSMUSG00000040048 Ndufb10 0610011B04Rik|22kDa|PDSW NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10 protein-coding common_peak1_80_646_-0.171279818999629_9.25198199249269_1.19804634604556 chr5 107647416 107648866 + 1.19804634604556 NA intron (NM_001289569, intron 11 of 12) intron (NM_001289569, intron 11 of 12) -14291 NR_046195 78443 Mm.490703 NR_046195 ENSMUSG00000085900 A930041C12Rik - RIKEN cDNA A930041C12 gene ncRNA common_peak2_71_435_0.189725659468452_8.86304715451115_1.19730761631749 chr11 109417628 109418617 + 1.19730761631749 NA Intergenic Intergenic -7824 NM_025275 13929 Mm.211850 NM_025275 ENSMUSG00000020610 Amz2 AA408420|ESTM12|X83328 archaelysin family metallopeptidase 2 protein-coding common_peak2_96_796_-0.153097550627063_9.56188713867694_1.19715186918398 chr3 107232157 107234649 + 1.19715186918398 NA intron (NM_001256174, intron 2 of 2) intron (NM_001256174, intron 2 of 2) 2789 NM_001256174 319929 Mm.30453 NM_001256174 ENSMUSG00000094613 A630076J17Rik - RIKEN cDNA A630076J17 gene protein-coding common_peak2_52_290_0.230866422534829_8.3003085541757_1.19709420372645 chr17 34940642 34942259 + 1.19709420372645 NA Intergenic Intergenic 9558 NR_028527 100217427 NR_028527 ENSMUSG00000093009 Snord52 MBII-297 small nucleolar RNA, C/D box 52 snoRNA common_peak2_113_961_-0.138782053033511_9.84050205725329_1.19705385183182 chr12 54728872 54730416 + 1.19705385183182 NA Intergenic U1|snRNA|snRNA -33779 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak1_47_354_-0.231287435113593_8.35603149683525_1.197040050991 chr9 61946941 61947601 + 1.197040050991 NA promoter-TSS (NM_024245) promoter-TSS (NM_024245) -472 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding common_peak2_41_213_0.262619968583708_7.872776970693_1.19680295654178 chr10 39898510 39899449 + 1.19680295654178 NA non-coding (NR_033628, exon 1 of 4) non-coding (NR_033628, exon 1 of 4) 259 NR_033628 213332 Mm.484359 NR_033628 Mfsd4b4 AA474331 major facilitator superfamily domain containing 4B4 pseudo common_peak1_94_777_-0.155156554710981_9.5260480676307_1.19651739939571 chr7 132851980 132853095 + 1.19651739939571 NA exon (NM_028095, exon 1 of 6) exon (NM_028095, exon 1 of 6) 110 NM_028095 72096 Mm.28631 NM_028095 ENSMUSG00000030960 Mettl10 2010208K18Rik methyltransferase like 10 protein-coding common_peak1_90_739_-0.159036417796266_9.45186325161818_1.19607811254901 chr6 47752554 47753872 + 1.19607811254901 NA promoter-TSS (NR_002841).10 promoter-TSS (NR_002841).10 -288 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_26_116_0.35184284725619_7.0462861432115_1.19570299711626-2 chr6 50109665 50110209 + 1.19570299711626 NA promoter-TSS (NM_019939) promoter-TSS (NM_019939) -304 NM_019939 56524 Mm.41288 NM_008016 ENSMUSG00000038388 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) protein-coding common_peak1_26_116_0.35184284725619_7.0462861432115_1.19570299711626 chr19 46338262 46338717 + 1.19570299711626 NA intron (NM_001164290, intron 1 of 9) CpG 171 NM_001164294 67116 Mm.218848 NM_024192 ENSMUSG00000036748 Cuedc2 3010002G01Rik CUE domain containing 2 protein-coding common_peak1_21_149_-0.369020947801929_7.04430821659492_1.19570299711626 chr2 32875605 32876132 + 1.19570299711626 NA promoter-TSS (NM_146119) promoter-TSS (NM_146119) -266 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak2_21_149_-0.369020947801929_7.04430821659492_1.19570299711626 chr15 102295607 102296328 + 1.19570299711626 NA promoter-TSS (NM_001014976) promoter-TSS (NM_001014976) -326 NM_001014976 105988 Mm.288324 NM_001014976 ENSMUSG00000058290 Espl1 AL024103|AU045071|Cerp|ESP1|PRCE|SSE extra spindle pole bodies 1, separase protein-coding common_peak1_31_225_-0.297313388103664_7.67152226836336_1.19501125604076 chr3 88624737 88625617 + 1.19501125604076 NA intron (NM_001198912, intron 1 of 21) intron (NM_001198912, intron 1 of 21) 3783 NM_001198912 16800 Mm.239329 NM_008487 ENSMUSG00000028059 Arhgef2 AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651 rho/rac guanine nucleotide exchange factor (GEF) 2 protein-coding common_peak2_73_451_0.186216999982578_8.91328746240648_1.19478198517798 chr9 75401452 75403044 + 1.19478198517798 NA intron (NM_015806, intron 1 of 5) intron (NM_015806, intron 1 of 5) 7111 NM_027418 50772 Mm.480076 NM_015806 ENSMUSG00000042688 Mapk6 2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6 mitogen-activated protein kinase 6 protein-coding common_peak2_245_2383_-0.0869784280570958_11.1756793064336_1.19471303249144 chr5 93131951 93138469 + 1.19471303249144 NA intron (NM_001310669, intron 1 of 10) MIR|SINE|MIR 41794 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_228_1928_0.0918304667090695_10.9595526614036_1.19419081973865 chr11 58977002 58978918 + 1.19419081973865 NA promoter-TSS (NM_053168) promoter-TSS (NM_053168) -133 NM_001290988 94091 Mm.248049 NM_053168 ENSMUSG00000020455 Trim11 - tripartite motif-containing 11 protein-coding unique_peak2_8_59_-0.628817544922207_5.59248182314742_1.19360251378961 chr8 94818369 94818896 + 1.19360251378961 NA Intergenic Intergenic 8179 NM_011332 20295 Mm.41988 NM_011332 ENSMUSG00000031780 Ccl17 Abcd-2|Scya17|Scya17l|Tarc chemokine (C-C motif) ligand 17 protein-coding common_peak1_34_166_0.297741422049482_7.53257500349879_1.19292205089792-2 chrX 167382300 167383103 + 1.19292205089792 NA promoter-TSS (NM_001313758) promoter-TSS (NM_001313758) 48 NM_026662 110639 Mm.272955 NM_026662 ENSMUSG00000025742 Prps2 2610101M19Rik|AA589463|AI464149|Prps-2 phosphoribosyl pyrophosphate synthetase 2 protein-coding common_peak2_34_166_0.297741422049482_7.53257500349879_1.19292205089792 chr11 50236135 50237336 + 1.19292205089792 NA intron (NR_132732, intron 4 of 4) CpG 1797 NM_001313968 17001 Mm.245151 NM_008521 ENSMUSG00000020377 Ltc4s - leukotriene C4 synthase protein-coding common_peak1_34_166_0.297741422049482_7.53257500349879_1.19292205089792 chr1 138292711 138293597 + 1.19292205089792 NA Intergenic Intergenic 19416 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_57_439_-0.206084087825735_8.67831766961179_1.19260760418348 chr11 108248285 108249422 + 1.19260760418348 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 95035 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_347_3605_-0.0701612283937774_11.7811030672355_1.19253074828895 chr18 35935149 35940489 + 1.19253074828895 NA Intergenic Intergenic -27011 NM_028707 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding common_peak2_295_2666_0.0786184752195531_11.4203113471607_1.19238766938464 chr2 121412585 121415802 + 1.19238766938464 NA promoter-TSS (NM_153075) promoter-TSS (NM_153075) 291 NM_007952 14827 Mm.263177 NM_007952 ENSMUSG00000027248 Pdia3 58kDa|ERp57|ERp60|ERp61|Erp|Grp58|PDI|PDI-Q2|PI-PLC|PLC[a]|Plca protein disulfide isomerase associated 3 protein-coding common_peak1_267_2352_0.0834827172981374_11.2420269638734_1.19219901303644 chr6 129180572 129183657 + 1.19219901303644 NA intron (NM_053109, intron 1 of 4) intron (NM_053109, intron 1 of 4) 1499 NM_053109 93694 Mm.197536 NM_053109 ENSMUSG00000030157 Clec2d Clr-b|Clrb|Ocil C-type lectin domain family 2, member d protein-coding common_peak1_631_6901_0.049137266236869_12.777367391554_1.19180695847877 chr9 32502538 32508865 + 1.19180695847877 NA intron (NM_008026, intron 1 of 8) B4A|SINE|B4 35751 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak2_20_82_0.402435212451573_6.57625703757271_1.19088451493638-2 chrX 136976983 136977562 + 1.19088451493638 NA promoter-TSS (NM_207267) promoter-TSS (NM_207267) -398 NM_207267 399591 Mm.381904 NM_207267 ENSMUSG00000072955 Tmsb15l 4930488E11Rik|Tb15r|Tmsb15b1-Tmsb15b2|Tmsb15r thymosin beta 15b like protein-coding common_peak1_20_82_0.402435212451573_6.57625703757271_1.19088451493638-3 chr11 90255627 90256139 + 1.19088451493638 NA intron (NM_026178, intron 1 of 6) intron (NM_026178, intron 1 of 6) 6407 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak2_20_82_0.402435212451573_6.57625703757271_1.19088451493638 chr16 44015821 44016517 + 1.19088451493638 NA 5' UTR (NM_153528, exon 1 of 13) 5' UTR (NM_153528, exon 1 of 13) 267 NM_153528 207798 Mm.19316 NM_153528 ENSMUSG00000036292 Gramd1c 4921521N14Rik GRAM domain containing 1C protein-coding common_peak1_20_82_0.402435212451573_6.57625703757271_1.19088451493638-4 chr2 167622844 167623145 + 1.19088451493638 NA intron (NM_001311146, intron 1 of 2) intron (NM_001311146, intron 1 of 2) 9011 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding unique_peak2_20_82_0.402435212451573_6.57625703757271_1.19088451493638 chr14 31669295 31670049 + 1.19088451493638 NA Intergenic Intergenic 28615 NM_025295 26363 Mm.282679 NM_025295 ENSMUSG00000021900 Btd - biotinidase protein-coding common_peak1_20_82_0.402435212451573_6.57625703757271_1.19088451493638-5 chr9 65547733 65548284 + 1.19088451493638 NA Intergenic Intergenic 32079 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_20_82_0.402435212451573_6.57625703757271_1.19088451493638-2 chr10 75504367 75504793 + 1.19088451493638 NA Intergenic B3|SINE|B2 12742 NM_175133 68778 Mm.29382 NM_175133 ENSMUSG00000033416 Gucd1 1110038D17Rik guanylyl cyclase domain containing 1 protein-coding common_peak1_20_82_0.402435212451573_6.57625703757271_1.19088451493638 chr1 36913794 36914263 + 1.19088451493638 NA intron (NM_018872, intron 1 of 40) intron (NM_018872, intron 1 of 40) 25499 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding common_peak1_26_186_-0.324686893048042_7.38455101336362_1.19022980371581-3 chr2 157137952 157138584 + 1.19022980371581 NA Intergenic ID_B1|SINE|B4 -3046 NM_018851 56045 Mm.248478 NM_018851 ENSMUSG00000027639 Samhd1 E330031J07Rik|Mg11 SAM domain and HD domain, 1 protein-coding common_peak1_26_186_-0.324686893048042_7.38455101336362_1.19022980371581 chr14 14706125 14706745 + 1.19022980371581 NA intron (NM_001033270, intron 1 of 24) intron (NM_001033270, intron 1 of 24) 3410 NM_001033270 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding common_peak1_26_186_-0.324686893048042_7.38455101336362_1.19022980371581-2 chr15 78598962 78599544 + 1.19022980371581 NA intron (NM_028195, intron 1 of 12) intron (NM_028195, intron 1 of 12) 2206 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak2_26_186_-0.324686893048042_7.38455101336362_1.19022980371581 chr7 19381959 19382671 + 1.19022980371581 NA exon (NM_007949, exon 2 of 23) exon (NM_007949, exon 2 of 23) 276 NM_007949 13871 Mm.36524 NM_007949 ENSMUSG00000030400 Ercc2 AA407812|AU020867|AW240756|CXPD|Ercc-2|Mhdarco15|RCO015|XPD excision repair cross-complementing rodent repair deficiency, complementation group 2 protein-coding unique_peak2_26_186_-0.324686893048042_7.38455101336362_1.19022980371581 chr14 31194664 31195871 + 1.19022980371581 NA intron (NM_022656, intron 3 of 20) intron (NM_022656, intron 3 of 20) 11559 NM_022656 64652 Mm.298728 NM_022656 ENSMUSG00000021910 Nisch 1200007D05Rik|3202002H23Rik|AW494485|I-1 nischarin protein-coding common_peak1_103_863_-0.146241635149824_9.68176668458856_1.1895361202188 chr7 143712835 143714235 + 1.1895361202188 NA exon (NM_001199227, exon 3 of 22) exon (NM_001199227, exon 3 of 22) 26825 NM_001199227 79196 Mm.21199 NM_024289 ENSMUSG00000037606 Osbpl5 1110006M06Rik|AI462538|ORP5|Obph1|Osbp2 oxysterol binding protein-like 5 protein-coding common_peak1_19_76_0.424347686935875_6.47896038416284_1.18877383208862 chr7 98534752 98535275 + 1.18877383208862 NA Intergenic Intergenic 40791 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak1_34_248_-0.278556217544547_7.82072382329581_1.18869088096591 chr15 84684455 84685028 + 1.18869088096591 NA intron (NM_146061, intron 1 of 7) MLT1D|LTR|ERVL-MaLR 3743 NM_146061 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding common_peak2_114_970_-0.136761094447362_9.85494693819551_1.18834346035452 chr13 93812058 93815776 + 1.18834346035452 NA intron (NM_009712, intron 4 of 7) intron (NM_009712, intron 4 of 7) 23140 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak1_154_1174_0.116342750160264_10.2566164165325_1.18831624326507 chr9 107624106 107625739 + 1.18831624326507 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 10420 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak1_149_1325_-0.116103040636563_10.3148135397943_1.18792312023835 chr12 85473295 85474721 + 1.18792312023835 NA 5' UTR (NM_010234, exon 1 of 4) 5' UTR (NM_010234, exon 1 of 4) 107 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak2_30_141_0.316935085229624_7.30821466211949_1.18790749220872 chr5 38684001 38685053 + 1.18790749220872 NA intron (NM_001081144, intron 1 of 3) CpG 299 NM_001081144 100515 Mm.38277 NM_001081144 ENSMUSG00000046572 Zfp518b 6820424L24Rik|AA410078|AI661722|Znf518b zinc finger protein 518B protein-coding common_peak1_95_634_0.156387308805279_9.38880643606217_1.18754387025182 chr7 19319219 19320743 + 1.18754387025182 NA Intergenic CpG -9936 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding common_peak2_164_1483_-0.109849842081601_10.48035045558_1.18745706479707 chr3 88770282 88773247 + 1.18745706479707 NA intron (NM_018804, intron 1 of 3) intron (NM_018804, intron 1 of 3) 835 NM_018804 229521 Mm.379376 NM_018804 ENSMUSG00000068923 Syt11 1500004A13Rik|3632445O20Rik|5430404N14Rik|6530420C11Rik|AI851970 synaptotagmin XI protein-coding common_peak1_66_518_-0.189047028208158_8.9250672142538_1.18742322262805 chr4 59238485 59239478 + 1.18742322262805 NA Intergenic Intergenic -21070 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA unique_peak2_49_371_-0.22653130778529_8.42589315721539_1.18719773602436 chr11 103371828 103373882 + 1.18719773602436 NA intron (NM_183034, intron 8 of 11) intron (NM_183034, intron 8 of 11) -9163 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak1_93_617_0.158280370708001_9.35060321325837_1.18686017793243 chr1 36243815 36244799 + 1.18686017793243 NA promoter-TSS (NM_198899) promoter-TSS (NM_198899) -5 NM_198899 320011 Mm.261022 NM_198899 ENSMUSG00000037470 Uggt1 0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding common_peak2_87_566_0.165817440124435_9.23011364500445_1.18674025332391 chr19 10880985 10882389 + 1.18674025332391 NA promoter-TSS (NM_134142) promoter-TSS (NM_134142) 56 NM_134142 68539 Mm.251890 NM_134142 ENSMUSG00000034659 Tmem109 1110006I15Rik|AA958958|C77652 transmembrane protein 109 protein-coding common_peak1_91_600_0.160464245755037_9.3114533035887_1.1864806132384 chr5 112302051 112303327 + 1.1864806132384 NA intron (NM_009419, intron 1 of 6) MER3|DNA|hAT-Charlie -23680 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding common_peak1_91_600_0.160464245755037_9.3114533035887_1.1864806132384-2 chr7 128523460 128524784 + 1.1864806132384 NA intron (NM_013863, intron 1 of 3) CpG 539 NM_013863 29810 Mm.84073 NM_013863 ENSMUSG00000030847 Bag3 AA407278|Bis|mg638 BCL2-associated athanogene 3 protein-coding common_peak1_89_583_0.16296638987097_9.2713077538155_1.18643101936296 chr17 57030667 57031685 + 1.18643101936296 NA exon (NM_010613, exon 1 of 18) exon (NM_010613, exon 1 of 18) 331 NM_010613 16549 Mm.34296 NM_010613 ENSMUSG00000007670 Khsrp 6330409F21Rik|Fbp2|Fubp2|Ksrp KH-type splicing regulatory protein protein-coding common_peak1_68_412_0.192597348827348_8.78629664583312_1.18602025200761 chr19 10277467 10278828 + 1.18602025200761 NA intron (NM_198114, intron 1 of 19) intron (NM_198114, intron 1 of 19) 26730 NM_198114 269060 Mm.329718 NM_198114 ENSMUSG00000035735 Dagla Nsddr diacylglycerol lipase, alpha protein-coding common_peak2_59_457_-0.203935044312884_8.7372362659405_1.18581431302988 chr17 71102368 71104072 + 1.18581431302988 NA intron (NM_010867, intron 25 of 37) intron (NM_010867, intron 25 of 37) -80758 NM_022882 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding unique_peak2_20_142_-0.382396692979891_6.96867299028844_1.18579289583689 chr11 90241951 90242902 + 1.18579289583689 NA Intergenic Lx8|LINE|L1 -7050 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak1_20_142_-0.382396692979891_6.96867299028844_1.18579289583689 chr10 18965144 18965627 + 1.18579289583689 NA Intergenic Intergenic 46578 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_20_142_-0.382396692979891_6.96867299028844_1.18579289583689-2 chr4 119173711 119174195 + 1.18579289583689 NA promoter-TSS (NM_001145935) promoter-TSS (NM_001145935) -97 NM_183140 195522 Mm.169620 NM_183140 ENSMUSG00000045268 Zfp691 6430544H17Rik|Znf691 zinc finger protein 691 protein-coding unique_peak2_20_142_-0.382396692979891_6.96867299028844_1.18579289583689-2 chr8 40584857 40585626 + 1.18579289583689 NA intron (NM_001040699, intron 6 of 13) MIRb|SINE|MIR 49551 NM_001040699 54384 Mm.294871 NM_019433 ENSMUSG00000039431 Mtmr7 - myotubularin related protein 7 protein-coding common_peak1_128_928_0.130326900024579_9.92469823639494_1.18566960358498 chr12 3571810 3573042 + 1.18566960358498 NA promoter-TSS (NM_007886) promoter-TSS (NM_007886) 35 NR_027870 13528 Mm.286202 NM_007886 ENSMUSG00000071454 Dtnb - dystrobrevin, beta protein-coding common_peak1_46_248_0.243129155357937_8.08156650974705_1.18552173292171 chr2 62645453 62646294 + 1.18552173292171 NA exon (NM_027835, exon 1 of 16) exon (NM_027835, exon 1 of 16) 382 NM_027835 71586 Mm.136224 NM_027835 ENSMUSG00000026896 Ifih1 9130009C22Rik|Helicard|Hlcd|MDA5|RLR-2 interferon induced with helicase C domain 1 protein-coding common_peak2_46_248_0.243129155357937_8.08156650974705_1.18552173292171 chr18 75444875 75446580 + 1.18552173292171 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -68918 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA common_peak2_162_1252_0.11267374459951_10.3475075716216_1.18492519671668 chr4 108847209 108849047 + 1.18492519671668 NA exon (NM_029571, exon 1 of 1) exon (NM_029571, exon 1 of 1) 271 NM_029571 100087 Mm.440007 NM_029571 ENSMUSG00000073775 Kti12 1110001A12Rik|AI326810|AU014758 KTI12 homolog, chromatin associated protein-coding common_peak2_40_206_0.2679563075661_7.82746511128238_1.18477736667321 chr7 31208226 31208878 + 1.18477736667321 NA Intergenic CpG 46194 NR_046062 100038516 Mm.387223 NR_046062 ENSMUSG00000100985 Gm10640 EG668322|ENSMUSG00000074193 predicted gene 10640 ncRNA common_peak1_19_134_-0.385681369420054_6.8839749123408_1.18405808914982 chr13 85287746 85288185 + 1.18405808914982 NA intron (NM_145452, intron 1 of 24) intron (NM_145452, intron 1 of 24) 1521 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak1_68_536_-0.186182957738618_8.9756867991161_1.18399988918835 chr10 128269950 128271110 + 1.18399988918835 NA promoter-TSS (NM_019963) promoter-TSS (NM_019963) -46 NM_019963 20847 Mm.293120 NM_019963 ENSMUSG00000040033 Stat2 1600010G07Rik|AW496480 signal transducer and activator of transcription 2 protein-coding common_peak2_68_536_-0.186182957738618_8.9756867991161_1.18399988918835 chr4 148444001 148445247 + 1.18399988918835 NA 5' UTR (NM_027873, exon 1 of 2) 5' UTR (NM_027873, exon 1 of 2) 127 NM_027873 71707 Mm.292503 NM_027873 ENSMUSG00000047719 Ubiad1 1200002M06Rik|AI426463|AW320947|Tere1 UbiA prenyltransferase domain containing 1 protein-coding common_peak2_627_6848_0.0490226118325054_12.7661889508621_1.18381214481781 chr3 60471336 60488430 + 1.18381214481781 NA intron (NM_001253713, intron 2 of 9) intron (NM_001253713, intron 2 of 9) 7053 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_199_1862_-0.0975598332461853_10.8146320423185_1.18358637423897 chr9 14783859 14785711 + 1.18358637423897 NA intron (NM_001310728, intron 1 of 18) CpG 131 NM_018736 17535 Mm.149071 NM_018736 ENSMUSG00000031928 Mre11a Mre11|Mre11b MRE11A homolog A, double strand break repair nuclease protein-coding common_peak1_43_227_0.253520039715566_7.95965003402252_1.18343704605995 chr19 41801311 41802000 + 1.18343704605995 NA intron (NM_001163495, intron 1 of 10) CpG 429 NM_001163495 71085 Mm.21646 NM_027667 ENSMUSG00000025154 Arhgap19 4933411B03Rik|AI120128|AW546831|mFLJ00368 Rho GTPase activating protein 19 protein-coding common_peak1_175_1600_-0.105122916263237_10.5921961343846_1.18331383828703 chr11 87403726 87405253 + 1.18331383828703 NA promoter-TSS (NM_031386) promoter-TSS (NM_031386) 6 NM_053269 114714 Mm.37376 NM_053269 ENSMUSG00000007646 Rad51c R51H3|Rad51l2 RAD51 paralog C protein-coding common_peak2_119_1020_-0.133886095907386_9.92882410292411_1.18294713817229 chr14 78913277 78915327 + 1.18294713817229 NA intron (NM_173758, intron 4 of 25) MTE2b|LTR|ERVL-MaLR 65124 NM_173758 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding common_peak1_119_1020_-0.133886095907386_9.92882410292411_1.18294713817229 chr17 29660661 29661656 + 1.18294713817229 NA intron (NM_028791, intron 1 of 23) intron (NM_028791, intron 1 of 23) 563 NM_028791 74157 Mm.390979 NM_028791 ENSMUSG00000024019 Cmtr1 1300018I05Rik|AI451264|Ftsjd2|MTr1 cap methyltransferase 1 protein-coding common_peak1_40_296_-0.252875855735341_8.0878811929331_1.18226779204792 chr1 171247193 171247930 + 1.18226779204792 NA promoter-TSS (NM_153064) promoter-TSS (NM_153064) -439 NM_153064 226646 Mm.21669 NM_153064 ENSMUSG00000013593 Ndufs2 CI-49kD NADH dehydrogenase (ubiquinone) Fe-S protein 2 protein-coding common_peak2_40_296_-0.252875855735341_8.0878811929331_1.18226779204792-2 chr6 38348096 38349895 + 1.18226779204792 NA intron (NM_028864, intron 1 of 8) intron (NM_028864, intron 1 of 8) 5608 NM_028864 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding common_peak1_40_296_-0.252875855735341_8.0878811929331_1.18226779204792-2 chr8 105326364 105327048 + 1.18226779204792 NA promoter-TSS (NM_177449) promoter-TSS (NM_177449) 342 NM_025486 66320 Mm.29990 NM_025486 ENSMUSG00000014856 Tmem208 1700006C06Rik|2610030K20Rik|Hspc171 transmembrane protein 208 protein-coding common_peak2_40_296_-0.252875855735341_8.0878811929331_1.18226779204792 chr11 107412429 107414130 + 1.18226779204792 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 57441 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_133_1160_-0.123996245529487_10.1191541341008_1.18208605114923 chr14 70598800 70600105 + 1.18208605114923 NA intron (NM_194345, intron 1 of 16) CpG 383 NM_194345 239170 Mm.247582 NM_194345 ENSMUSG00000022095 Fam160b2 G430067P06Rik|Rai16 family with sequence similarity 160, member B2 protein-coding unique_peak2_61_474_-0.198489187297648_8.79253910956949_1.18202771144995 chr6 50559903 50562059 + 1.18202771144995 NA Intergenic Intergenic 5493 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding common_peak1_145_1284_-0.118621306509255_10.2682419908266_1.18112196196859 chr5 74067764 74069197 + 1.18112196196859 NA promoter-TSS (NM_177561) promoter-TSS (NM_177561) -69 NM_177561 69727 Mm.48795 NM_177561 ENSMUSG00000054814 Usp46 1190009E20Rik|2410018I08Rik|AI451644 ubiquitin specific peptidase 46 protein-coding common_peak1_150_1335_-0.1151839074885_10.3261123387298_1.18101220257514 chr9 48494559 48495981 + 1.18101220257514 NA promoter-TSS (NM_144948) promoter-TSS (NM_144948) 60 NR_037589 67010 Mm.76911 NM_144948 ENSMUSG00000042396 Rbm7 1200007M24Rik|1500011D06Rik|AU041934|AW554393 RNA binding motif protein 7 protein-coding common_peak2_178_1633_-0.104647682722915_10.6218684267842_1.18061990708652 chr17 55958256 55960429 + 1.18061990708652 NA promoter-TSS (NR_108021) promoter-TSS (NR_108021) 59 NR_108021 100504333 Mm.391908 NR_108021 ENSMUSG00000097077 Gm16712 - predicted gene, 16712 ncRNA common_peak2_51_284_0.227215446775183_8.2684258324397_1.18041819953762 chr11 59964615 59965660 + 1.18041819953762 NA promoter-TSS (NM_009026) promoter-TSS (NM_009026) -193 NM_009026 19416 Mm.3903 NM_009026 ENSMUSG00000049892 Rasd1 Dexras1 RAS, dexamethasone-induced 1 protein-coding common_peak1_56_430_-0.207045339538926_8.64802138931964_1.18036381892273 chr11 74546915 74547774 + 1.18036381892273 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 42814 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_276_2743_-0.0798447171252832_11.3821424076102_1.18002002565643 chr7 143547686 143550055 + 1.18002002565643 NA promoter-TSS (NM_001285490) promoter-TSS (NM_001285490) -42 NM_001285490 17955 Mm.294625 NM_008672 ENSMUSG00000059119 Nap1l4 2810410H14Rik|AI316776|D7Wsu30e|Nap2 nucleosome assembly protein 1-like 4 protein-coding common_peak1_415_4091_0.063280059641027_12.0302304595658_1.17986454137303 chr19 53902005 53904714 + 1.17986454137303 NA promoter-TSS (NM_001168492) promoter-TSS (NM_001168492) 8 NM_001168491 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak1_124_1069_-0.129274302273807_9.99875793015161_1.17977404014336 chr19 53535625 53537532 + 1.17977404014336 NA intron (NM_001085390, intron 2 of 3) intron (NM_001085390, intron 2 of 3) 7260 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak2_234_1993_0.0897869799061404_11.0063431843513_1.17931415942605 chr7 126975384 126977288 + 1.17931415942605 NA 5' UTR (NM_026638, exon 1 of 6) 5' UTR (NM_026638, exon 1 of 6) 422 NM_026638 52858 Mm.28219 NM_026638 ENSMUSG00000030682 Cdipt 9530042F15Rik|D7Bwg0575e|Pis|Pis1 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) protein-coding common_peak2_168_1311_0.110261843911326_10.4126829265737_1.17915255912553 chr19 40830349 40832504 + 1.17915255912553 NA 5' UTR (NM_172839, exon 1 of 6) 5' UTR (NM_172839, exon 1 of 6) 147 NM_172839 240665 Mm.309 NM_172839 ENSMUSG00000025010 Ccnj D430039C20Rik cyclin J protein-coding common_peak2_51_388_-0.221592789158905_8.49282995040674_1.17885966539392 chr6 108540158 108541749 + 1.17885966539392 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 51210 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_51_388_-0.221592789158905_8.49282995040674_1.17885966539392 chr14 54893306 54893914 + 1.17885966539392 NA promoter-TSS (NM_019402) promoter-TSS (NM_019402) -533 NM_019402 54196 Mm.7723 NM_019402 ENSMUSG00000022194 Pabpn1 PAB2|Pabp3|mPABII poly(A) binding protein, nuclear 1 protein-coding common_peak1_51_388_-0.221592789158905_8.49282995040674_1.17885966539392-2 chr2 165882447 165883579 + 1.17885966539392 NA promoter-TSS (NM_001281926) promoter-TSS (NM_001281926) -735 NM_001281926 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_25_111_0.348066322583328_6.98138808334927_1.17878887567373-4 chr9 25481570 25481992 + 1.17878887567373 NA 5' UTR (NM_026189, exon 1 of 8) 5' UTR (NM_026189, exon 1 of 8) 184 NM_026189 67484 Mm.112977 NM_026189 ENSMUSG00000036611 Eepd1 2310005P05Rik|AI481005 endonuclease/exonuclease/phosphatase family domain containing 1 protein-coding common_peak1_25_111_0.348066322583328_6.98138808334927_1.17878887567373 chr18 80678844 80679302 + 1.17878887567373 NA intron (NM_198429, intron 3 of 9) intron (NM_198429, intron 3 of 9) 29100 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_25_111_0.348066322583328_6.98138808334927_1.17878887567373-2 chr8 120701820 120702425 + 1.17878887567373 NA Intergenic Intergenic 33802 NM_001293559 12857 Mm.386758 NM_009941 ENSMUSG00000031818 Cox4i1 AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1 cytochrome c oxidase subunit IV isoform 1 protein-coding common_peak1_25_111_0.348066322583328_6.98138808334927_1.17878887567373-3 chr8 122990142 122990746 + 1.17878887567373 NA intron (NR_037865, intron 1 of 13) intron (NR_037865, intron 1 of 13) 51840 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_33_160_0.29923169404591_7.48053272513757_1.17854980159325 chr17 46031092 46031825 + 1.17854980159325 NA exon (NM_001025250, exon 1 of 8) exon (NM_001025250, exon 1 of 8) 919 NM_001287058 22339 Mm.282184 NM_009505 ENSMUSG00000023951 Vegfa Vegf|Vpf vascular endothelial growth factor A protein-coding common_peak2_74_460_0.181526767860328_8.9393863243595_1.17839355547693 chr9 124281077 124282769 + 1.17839355547693 NA Intergenic Intergenic 30771 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak1_18_71_0.430439201954578_6.3851446024196_1.17831092014796-3 chr14 106029554 106030015 + 1.17831092014796 NA Intergenic Lx9|LINE|L1 -76414 NM_198601 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_18_71_0.430439201954578_6.3851446024196_1.17831092014796-2 chr10 80026817 80027214 + 1.17831092014796 NA intron (NM_001142701, intron 16 of 22) intron (NM_001142701, intron 16 of 22) 7340 NM_027521 70719 Mm.243954 NM_027521 ENSMUSG00000035697 Hmha1 6330406L22Rik|AW539505|Ha-1 histocompatibility (minor) HA-1 protein-coding common_peak1_18_71_0.430439201954578_6.3851446024196_1.17831092014796-4 chr9 96349555 96350002 + 1.17831092014796 NA intron (NM_007502, intron 1 of 6) intron (NM_007502, intron 1 of 6) 14521 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding unique_peak2_18_71_0.430439201954578_6.3851446024196_1.17831092014796 chr3 31135812 31136403 + 1.17831092014796 NA Intergenic Intergenic -13813 NM_008770 18417 Mm.4425 NM_008770 ENSMUSG00000037625 Cldn11 Claudin-11|Claudin11|Osp|Otm claudin 11 protein-coding common_peak2_18_71_0.430439201954578_6.3851446024196_1.17831092014796 chr9 45244061 45244709 + 1.17831092014796 NA intron (NM_001198971, intron 4 of 4) intron (NM_001198971, intron 4 of 4) 22322 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak1_18_71_0.430439201954578_6.3851446024196_1.17831092014796 chr1 181245154 181245660 + 1.17831092014796 NA Intergenic Intergenic -33429 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak2_163_1262_0.112028963650586_10.3586534056128_1.17819241927405 chr9 75558385 75559961 + 1.17819241927405 NA intron (NM_016963, intron 1 of 9) CpG 484 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak2_143_1263_-0.119258452745367_10.2441515218044_1.17818315126712 chr18 34371898 34373533 + 1.17818315126712 NA intron (NM_007874, intron 1 of 4) intron (NM_007874, intron 1 of 4) 700 NM_007874 13476 Mm.280075 NM_007874 ENSMUSG00000005873 Reep5 AI324241|AU022809|AW495741|DP1/TB2|Dp1|R74856|TB2/DP1 receptor accessory protein 5 protein-coding common_peak1_74_590_-0.176864611887865_9.1185820142336_1.17736741159416 chr13 43479866 43480817 + 1.17736741159416 NA intron (NM_019930, intron 1 of 13) intron (NM_019930, intron 1 of 13) 632 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak1_220_1844_0.0931360751012473_10.8959731384984_1.17706489813431 chr3 127551925 127553963 + 1.17706489813431 NA promoter-TSS (NM_197997) promoter-TSS (NM_197997) 405 NM_138593 28036 Mm.291032 NM_138593 ENSMUSG00000027968 Larp7 C330027G06Rik|D3Wsu161e La ribonucleoprotein domain family, member 7 protein-coding common_peak2_76_476_0.178876084767555_8.98728349838929_1.17703811455978 chrX 36597544 36599151 + 1.17703811455978 NA exon (NM_016783, exon 1 of 3) exon (NM_016783, exon 1 of 3) 154 NM_016783 53328 Mm.9052 NM_016783 ENSMUSG00000006373 Pgrmc1 AA415812|HPR6.6|PPMR|Vema progesterone receptor membrane component 1 protein-coding common_peak1_33_240_-0.282740764069435_7.77151895419524_1.17691337826063 chr17 27119467 27120023 + 1.17691337826063 NA intron (NM_080553, intron 55 of 57) intron (NM_080553, intron 55 of 57) 14146 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding unique_peak2_25_179_-0.336431851688743_7.3236371704853_1.17684381631299 chr9 35061506 35062696 + 1.17684381631299 NA intron (NM_009178, intron 1 of 10) RMER6B|LTR|ERVK -54627 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA common_peak1_25_179_-0.336431851688743_7.3236371704853_1.17684381631299-2 chr17 25133390 25133894 + 1.17684381631299 NA intron (NM_011930, intron 1 of 24) CpG 248 NM_011930 26373 Mm.270587 NM_011930 ENSMUSG00000036636 Clcn7 ClC-7|D17Wsu51e chloride channel, voltage-sensitive 7 protein-coding common_peak2_25_179_-0.336431851688743_7.3236371704853_1.17684381631299 chr8 70765686 70766778 + 1.17684381631299 NA intron (NM_023065, intron 1 of 7) intron (NM_023065, intron 1 of 7) 431 NM_023065 65972 Mm.30241 NM_023065 ENSMUSG00000031838 Ifi30 GILT|IP30 interferon gamma inducible protein 30 protein-coding common_peak1_25_179_-0.336431851688743_7.3236371704853_1.17684381631299-3 chr8 84127491 84127990 + 1.17684381631299 NA intron (NM_001013384, intron 4 of 9) intron (NM_001013384, intron 4 of 9) 1751 NM_001013384 244550 Mm.334654 NM_001013384 ENSMUSG00000012889 Podnl1 5832418A03Rik|Gm506 podocan-like 1 protein-coding common_peak1_25_179_-0.336431851688743_7.3236371704853_1.17684381631299 chr13 54574929 54575486 + 1.17684381631299 NA exon (NM_019968, exon 1 of 4) exon (NM_019968, exon 1 of 4) 194 NM_019968 56795 Mm.89484 NM_019968 ENSMUSG00000025870 Arl10 Arl10a|Arm1 ADP-ribosylation factor-like 10 protein-coding common_peak1_48_262_0.237957247618382_8.15789761310149_1.17672246024923 chr11 70919398 70920472 + 1.17672246024923 NA intron (NM_001291142, intron 9 of 16) intron (NM_001291142, intron 9 of 16) 50038 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding common_peak1_206_1697_0.0971090928470399_10.7781752899766_1.1765239970194 chr16 33379917 33381879 + 1.1765239970194 NA promoter-TSS (NR_045709) promoter-TSS (NR_045709) 123 NM_011749 22661 Mm.392667 NM_011749 ENSMUSG00000022811 Zfp148 2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148 zinc finger protein 148 protein-coding common_peak2_98_814_-0.149201785304276_9.5960553564663_1.17630697685382 chr19 23686651 23688115 + 1.17630697685382 NA promoter-TSS (NM_028208) promoter-TSS (NM_028208) -17 NM_028208 72351 Mm.474795 NM_028208 ENSMUSG00000074925 Ptar1 1700084D09Rik|2010013L17Rik|4930428J16Rik|AI449677 protein prenyltransferase alpha subunit repeat containing 1 protein-coding common_peak1_76_608_-0.173576877133266_9.1635099793397_1.17618402501642 chr14 54492028 54492978 + 1.17618402501642 NA Intergenic MTD|LTR|ERVL-MaLR 16403 NM_080726 140743 Mm.274727 NM_080726 ENSMUSG00000022176 Rem2 AW411893 rad and gem related GTP binding protein 2 protein-coding common_peak1_129_1120_-0.127043731286173_10.0670486971623_1.17606224661321 chr2 165654313 165656224 + 1.17606224661321 NA promoter-TSS (NM_010165) promoter-TSS (NM_010165) -30 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding common_peak1_48_362_-0.226949501085066_8.39035098745322_1.17566321131944 chr11 98438494 98439247 + 1.17566321131944 NA exon (NM_025559, exon 1 of 4) exon (NM_025559, exon 1 of 4) 118 NM_025559 103742 Mm.259614 NM_025559 ENSMUSG00000002580 Mien1 1810046J19Rik|AI463380|Rdx12 migration and invasion enhancer 1 protein-coding common_peak2_65_389_0.196601945097626_8.70563128629842_1.17551618741048 chr19 14351121 14352817 + 1.17551618741048 NA Intergenic L1MB7|LINE|L1 86537 NR_003027 19862 NR_003027 ENSMUSG00000095132 Rnu6 - U6 small nuclear RNA snRNA common_peak1_120_855_0.135099858234302_9.8090169155183_1.1753897075775 chr8 120751245 120753242 + 1.1753897075775 NA intron (NM_008320, intron 6 of 8) intron (NM_008320, intron 6 of 8) 13604 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding unique_peak2_29_135_0.321193591347364_7.24805963692402_1.17510305354099-2 chr17 73273629 73274504 + 1.17510305354099 NA Intergenic Intergenic 125230 NM_001033444 381122 Mm.81496 NM_001033444 ENSMUSG00000043705 Capn13 CANP 13|Gm943 calpain 13 protein-coding common_peak1_29_135_0.321193591347364_7.24805963692402_1.17510305354099 chr17 55712130 55712600 + 1.17510305354099 NA intron (NM_028370, intron 1 of 16) intron (NM_028370, intron 1 of 16) 263 NM_028370 72836 Mm.177073 NM_028370 ENSMUSG00000024174 Pot1b 2810458H16Rik protection of telomeres 1B protein-coding unique_peak2_29_135_0.321193591347364_7.24805963692402_1.17510305354099 chr1 92064575 92065416 + 1.17510305354099 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 115346 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_29_135_0.321193591347364_7.24805963692402_1.17510305354099-2 chr2 178525794 178526440 + 1.17510305354099 NA Intergenic Intergenic 95602 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak2_229_2198_-0.0894531866967849_11.0579052955066_1.17489868480486 chr6 71631649 71634098 + 1.17489868480486 NA promoter-TSS (NM_001038695) promoter-TSS (NM_001038695) 44 NM_001038695 104263 Mm.260479 NM_173001 ENSMUSG00000053470 Kdm3a 1700105C21Rik|C230043E16Rik|JHDM2a|Jmjd1|Jmjd1a|KDM2A|TGSA|Tsga lysine (K)-specific demethylase 3A protein-coding common_peak2_53_298_0.224818203827846_8.33641077611203_1.1748883010884 chr7 27837927 27839196 + 1.1748883010884 NA promoter-TSS (NM_011762) promoter-TSS (NM_011762) -23 NM_011762 22717 Mm.379046 NM_011762 ENSMUSG00000078779 Zfp59 Mfg-2|Mfg2 zinc finger protein 59 protein-coding common_peak2_166_1504_-0.108801165959106_10.5011471886675_1.17461317154466 chr11 70451428 70453019 + 1.17461317154466 NA exon (NM_025397, exon 2 of 3) exon (NM_025397, exon 2 of 3) 292 NM_025397 66172 Mm.46424 NM_025397 ENSMUSG00000018923 Med11 1110030J09Rik|AI465144|AW545069 mediator complex subunit 11 protein-coding common_peak2_127_919_0.13060014573986_9.91079012381431_1.1744328051398 chr2 45185143 45189125 + 1.1744328051398 NA Intergenic Intergenic -73855 NM_015753 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak2_82_525_0.170586879876046_9.12421242923033_1.17422545029141 chr16 91412258 91414195 + 1.17422545029141 NA intron (NM_008349, intron 3 of 6) Tigger5b|DNA|TcMar-Tigger 6991 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding common_peak2_146_1294_-0.117725629509948_10.2798735678189_1.17404343867223 chr9 65216514 65219141 + 1.17404343867223 NA intron (NM_177460, intron 2 of 6) intron (NM_177460, intron 2 of 6) 3137 NM_177460 214424 Mm.31129 NM_177460 ENSMUSG00000032392 Parp16 ARTD15|BC055447|C79952|PARP-16 poly (ADP-ribose) polymerase family, member 16 protein-coding common_peak1_29_209_-0.305589085068419_7.56145097513191_1.17402820593035-2 chr3 53167684 53168300 + 1.17402820593035 NA intron (NM_175386, intron 2 of 3) ORR1B1|LTR|ERVL-MaLR 126445 NM_175386 108927 Mm.118617 NM_175386 ENSMUSG00000048332 Lhfp 2810489O06Rik|AI194968 lipoma HMGIC fusion partner protein-coding unique_peak2_29_209_-0.305589085068419_7.56145097513191_1.17402820593035 chr4 147219151 147220793 + 1.17402820593035 NA intron (NM_001039209, intron 1 of 2) MuLV-int|LTR|ERV1 44106 NM_001039209 195531 Mm.270762 NM_001039209 ENSMUSG00000078496 Zfp982 Gm13152|OTTMUSG00000010671 zinc finger protein 982 protein-coding common_peak1_29_209_-0.305589085068419_7.56145097513191_1.17402820593035 chr12 101896784 101897294 + 1.17402820593035 NA intron (NM_028446, intron 4 of 20) L1MA6|LINE|L1 16132 NM_028446 109181 Mm.208618 NM_028446 ENSMUSG00000021188 Trip11 2610511G22Rik|3110031G15Rik|6030460N08Rik|AI450776|GMAP-210|TRIP230 thyroid hormone receptor interactor 11 protein-coding common_peak1_58_336_0.208921623859966_8.50106559311184_1.17401416276883 chr13 25019787 25020355 + 1.17401416276883 NA intron (NM_001013389, intron 1 of 10) CpG 246 NM_001013389 380836 Mm.387097 NM_001013389 ENSMUSG00000021339 Mrs2 Gm902|HPT|Mrs2l|RPT MRS2 magnesium transporter protein-coding common_peak1_109_920_-0.139154016519065_9.7774803378318_1.17390916147637 chr11 109494491 109496478 + 1.17390916147637 NA intron (NM_028710, intron 4 of 13) intron (NM_028710, intron 4 of 13) -21888 NM_001029842 104681 Mm.265874 NM_134038 ENSMUSG00000041920 Slc16a6 AW743111|ESTM12|MCT 6|MCT 7|MCT6 solute carrier family 16 (monocarboxylic acid transporters), member 6 protein-coding common_peak2_82_663_-0.165533562178577_9.29227265025764_1.17371836588722 chr2 26314461 26316534 + 1.17371836588722 NA promoter-TSS (NM_001199146) promoter-TSS (NM_001199146) -36 NM_001199146 67839 Mm.266611 NM_153410 ENSMUSG00000026930 Gpsm1 1810037C22Rik|AW107933|Ags3 G-protein signalling modulator 1 (AGS3-like, C. elegans) protein-coding common_peak1_90_592_0.160456748174044_9.29211666863302_1.17371836588703 chr8 109737010 109737987 + 1.17371836588703 NA intron (NM_001080930, intron 1 of 3) CpG 241 NM_001080930 52335 Mm.276770 NM_001080930 ENSMUSG00000069895 Atxn1l AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e|ENSMUSG00000069895 ataxin 1-like protein-coding common_peak2_92_757_-0.155237317283502_9.48843537952934_1.17364961924004 chr14 118088803 118090221 + 1.17364961924004 NA Intergenic Intergenic -37266 NM_010024 13190 Mm.19987 NM_010024 ENSMUSG00000022129 Dct DT|TRP-2|TRP2|Tyrp-2|Tyrp2|slaty|slt dopachrome tautomerase protein-coding common_peak1_174_1589_-0.105259748769864_10.5821811757868_1.17356196025244 chr5 123979997 123982031 + 1.17356196025244 NA intron (NM_145070, intron 1 of 31) intron (NM_145070, intron 1 of 31) 7386 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding common_peak2_58_448_-0.205045229699321_8.70804901989149_1.17342576141181 chr14 70332764 70334906 + 1.17342576141181 NA intron (NM_001135151, intron 1 of 9) intron (NM_001135151, intron 1 of 9) 14598 NM_001135152 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak2_90_738_-0.157085511426104_9.4508877984331_1.17329074330121 chr12 102689730 102691925 + 1.17329074330121 NA intron (NM_172584, intron 1 of 9) PB1D7|SINE|Alu -5807 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak1_88_719_-0.158834727565486_9.41243573254693_1.17323108926733 chr8 72359686 72361100 + 1.17323108926733 NA intron (NM_007944, intron 21 of 23) (CA)n|Simple_repeat|Simple_repeat 41331 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_84_542_0.16683346004813_9.16822511782843_1.17314175249737 chr7 64042584 64044045 + 1.17314175249737 NA Intergenic Intergenic -104399 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak2_118_1009_-0.133067207399513_9.9136059739394_1.17262138648427 chr4 109201189 109202662 + 1.17262138648427 NA intron (NM_133885, intron 1 of 22) CpG 347 NM_133885 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding common_peak2_169_1535_-0.106708341682308_10.53160832988_1.17252927586623 chr1 185118745 185122597 + 1.17252927586623 NA Intergenic Intergenic -83497 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding common_peak2_45_241_0.246209878005271_8.04196817627723_1.17236823159233 chr11 79130200 79132012 + 1.17236823159233 NA intron (NM_013571, intron 1 of 17) intron (NM_013571, intron 1 of 17) 15248 NM_013571 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb kinase suppressor of ras 1 protein-coding common_peak2_45_337_-0.235806321002318_8.28297627578102_1.17194428445248 chr15 83121670 83123065 + 1.17194428445248 NA intron (NM_029101, intron 1 of 6) CpG 434 NM_029101 74778 Mm.30056 NM_029101 ENSMUSG00000018040 Rrp7a 1110014J01Rik|AA408146|Kheg1 ribosomal RNA processing 7 homolog A (S. cerevisiae) protein-coding common_peak2_107_739_0.144050728695994_9.60340682486431_1.17180585283737 chr8 35633065 35635440 + 1.17180585283737 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -45232 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_107_901_-0.141551434043073_9.74620790623384_1.17159959228219 chr6 130234145 130238901 + 1.17159959228219 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -3201 NM_001110323 16638 Mm.441781 NM_014194 ENSMUSG00000067599 Klra7 LGL-1|Ly-49G.1|Ly-49G.2|Ly-49G.3|Ly49G.4|Ly49g|Ly49g1|Ly49g2 killer cell lectin-like receptor, subfamily A, member 7 protein-coding common_peak2_164_1272_0.111408830637844_10.3697211192203_1.17156146155528 chr4 32256927 32259994 + 1.17156146155528 NA Intergenic Intergenic -158975 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_67_405_0.191424966161707_8.76104840026603_1.17153787317802 chr13 43214933 43216899 + 1.17153787317802 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -44415 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_67_527_-0.187633236011571_8.95057750135267_1.17130129823829 chr8 121950753 121951445 + 1.17130129823829 NA intron (NM_001285981, intron 1 of 12) CpG 607 NM_001285983 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak1_144_1079_0.119953304340058_10.1367922492209_1.17112985989644 chr6 124731597 124733242 + 1.17112985989644 NA exon (NM_001077705, exon 3 of 16) exon (NM_001077705, exon 3 of 16) 735 NM_013545 15170 Mm.271799 NM_013545 ENSMUSG00000004266 Ptpn6 70Z-SHP|Hcph|PTPTY-42|Ptp1C|SH-PTP1|SHP-1|hcp|me protein tyrosine phosphatase, non-receptor type 6 protein-coding common_peak2_36_180_0.279937764128205_7.63981476914731_1.1710724295521 chr2 5613428 5615140 + 1.1710724295521 NA intron (NM_177343, intron 1 of 10) intron (NM_177343, intron 1 of 10) 61762 NM_001290376 227541 Mm.191949 NM_177343 ENSMUSG00000039145 Camk1d A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK calcium/calmodulin-dependent protein kinase ID protein-coding common_peak2_36_180_0.279937764128205_7.63981476914731_1.1710724295521-2 chr5 105136335 105138093 + 1.1710724295521 NA intron (NM_008620, intron 1 of 10) intron (NM_008620, intron 1 of 10) 2338 NM_008620 17472 Mm.440525 NM_008620 ENSMUSG00000079363 Gbp4 AW228052|Mag-2|Mpa-2|Mpa2 guanylate binding protein 4 protein-coding common_peak1_36_180_0.279937764128205_7.63981476914731_1.1710724295521 chr3 135689154 135690024 + 1.1710724295521 NA intron (NM_008689, intron 1 of 24) intron (NM_008689, intron 1 of 24) 1958 NM_008689 18033 Mm.256765 NM_008689 ENSMUSG00000028163 Nfkb1 NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 protein-coding common_peak2_36_264_-0.270064898239152_7.91481610033099_1.17081933565591-2 chr3 57651089 57651933 + 1.17081933565591 NA intron (NM_175095, intron 1 of 4) CpG 173 NM_175095 52245 Mm.21901 NM_175095 ENSMUSG00000036513 Commd2 1190017G07Rik|AI047739|D3Ertd176e|HSPC042 COMM domain containing 2 protein-coding common_peak2_36_264_-0.270064898239152_7.91481610033099_1.17081933565591 chr2 60171958 60173371 + 1.17081933565591 NA Intergenic Intergenic -37272 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding common_peak2_196_1594_0.0997659079730688_10.6892236626388_1.17064935458205 chr8 106892213 106894489 + 1.17064935458205 NA promoter-TSS (NM_011574) promoter-TSS (NM_011574) 242 NM_145412 214987 Mm.490308 NM_145412 ENSMUSG00000046691 Chtf8 5830457O10Rik|Ctf8|Derpc CTF8, chromosome transmission fidelity factor 8 protein-coding common_peak1_42_312_-0.244291676678667_8.16787300859328_1.1706270737366 chr17 29510029 29510994 + 1.1706270737366 NA Intergenic B1_Mur4|SINE|Alu 19466 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_188_1512_0.102547403888329_10.6144699741609_1.16980370275686 chr1 180330419 180331511 + 1.16980370275686 NA promoter-TSS (NR_003623) promoter-TSS (NR_003623) -416 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_60_465_-0.199666693607307_8.76435279785063_1.16953593348632 chr8 119910573 119911274 + 1.16953593348632 NA exon (NM_009462, exon 1 of 14) exon (NM_009462, exon 1 of 14) 563 NM_001310630 22224 Mm.256910 NM_009462 ENSMUSG00000031826 Usp10 2610014N07Rik|UBPO|Uchrp|mKIAA0190 ubiquitin specific peptidase 10 protein-coding unique_peak2_24_171_-0.340249562565714_7.25613997341924_1.16938380841793 chr19 12576502 12577839 + 1.16938380841793 NA 5' UTR (NM_026640, exon 2 of 4) 5' UTR (NM_026640, exon 2 of 4) 3645 NM_026640 107373 Mm.1643 NM_026640 ENSMUSG00000024691 Fam111a 4632417K18Rik|AW413625 family with sequence similarity 111, member A protein-coding common_peak1_24_171_-0.340249562565714_7.25613997341924_1.16938380841793 chr3 87766625 87767243 + 1.16938380841793 NA intron (NM_001289601, intron 1 of 24) intron (NM_001289601, intron 1 of 24) 2019 NM_001032413 73182 Mm.158962 NM_028460 ENSMUSG00000028073 Pear1 3110045G13Rik|Jedi-1|Megf12 platelet endothelial aggregation receptor 1 protein-coding common_peak1_17_120_-0.414177875401927_6.71177429957363_1.16927723988528-4 chr6 54806428 54807021 + 1.16927723988528 NA Intergenic Intergenic -10192 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_17_120_-0.414177875401927_6.71177429957363_1.16927723988528-2 chr4 6373616 6374059 + 1.16927723988528 NA intron (NM_016807, intron 1 of 8) MLT1A0|LTR|ERVL-MaLR 8157 NM_001098227 53378 Mm.247473 NM_016807 ENSMUSG00000028249 Sdcbp MDA-9|Sycl|syntenin-1 syndecan binding protein protein-coding common_peak1_17_120_-0.414177875401927_6.71177429957363_1.16927723988528 chr1 34433390 34433835 + 1.16927723988528 NA promoter-TSS (NR_039562) promoter-TSS (NR_039562) -413 NR_039562 100628580 NR_039562 ENSMUSG00000092852 Mir5103 mir-5103|mmu-mir-5103|mu-mir-5103 microRNA 5103 ncRNA unique_peak2_17_120_-0.414177875401927_6.71177429957363_1.16927723988528-3 chr18 84804241 84805120 + 1.16927723988528 NA Intergenic Intergenic -46734 NM_025797 109672 Mm.31018 NM_025797 ENSMUSG00000024646 Cyb5a 0610009N12Rik|Cyb5 cytochrome b5 type A (microsomal) protein-coding unique_peak2_17_120_-0.414177875401927_6.71177429957363_1.16927723988528-5 chr6 54993006 54993598 + 1.16927723988528 NA promoter-TSS (NM_026637) promoter-TSS (NM_026637) -435 NM_026637 110175 Mm.294708 NM_026637 ENSMUSG00000002797 Ggct A030007L17Rik|AA673177|Gctg|Ggc gamma-glutamyl cyclotransferase protein-coding common_peak1_17_120_-0.414177875401927_6.71177429957363_1.16927723988528-3 chr5 121838954 121839272 + 1.16927723988528 NA Intergenic Intergenic -2254 NM_001306127 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding unique_peak2_17_120_-0.414177875401927_6.71177429957363_1.16927723988528 chr1 192076089 192077283 + 1.16927723988528 NA intron (NM_011633, intron 1 of 9) intron (NM_011633, intron 1 of 9) 15913 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding unique_peak2_17_120_-0.414177875401927_6.71177429957363_1.16927723988528-2 chr11 76486640 76487677 + 1.16927723988528 NA intron (NM_198018, intron 1 of 21) intron (NM_198018, intron 1 of 21) -18693 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_17_120_-0.414177875401927_6.71177429957363_1.16927723988528 chr1 170949052 170949878 + 1.16927723988528 NA Intergenic MuLV-int|LTR|ERV1 -21882 NR_027666 98752 Mm.1850 NM_145141 ENSMUSG00000038421 Fcrla BB219290|FCRL|FCRL1|FREB|Fcrlm1|Fcrx|Freb1|mFREB|mFcrX Fc receptor-like A protein-coding unique_peak2_17_120_-0.414177875401927_6.71177429957363_1.16927723988528-4 chr5 135625304 135626249 + 1.16927723988528 NA Intergenic MMVL30-int|LTR|ERV1 -6878 NM_146002 215160 Mm.295438 NM_031398 ENSMUSG00000039917 Rhbdd2 0610011L13Rik|AI480532|Rhbdl7|Usmg1 rhomboid domain containing 2 protein-coding common_peak1_17_66_0.438596171414895_6.28538727616522_1.16916033364217-6 chr6 135362268 135362707 + 1.16916033364217 NA promoter-TSS (NM_010128) promoter-TSS (NM_010128) -444 NM_010128 13730 Mm.182785 NM_010128 ENSMUSG00000030208 Emp1 I-8-09|TMP epithelial membrane protein 1 protein-coding common_peak1_17_66_0.438596171414895_6.28538727616522_1.16916033364217-3 chr14 46760526 46761028 + 1.16916033364217 NA intron (NM_028222, intron 1 of 7) CpG 236 NM_028222 72391 Mm.272394 NM_028222 ENSMUSG00000037628 Cdkn3 2410006H10Rik|KAP cyclin-dependent kinase inhibitor 3 protein-coding common_peak1_17_66_0.438596171414895_6.28538727616522_1.16916033364217-2 chr12 102317293 102317621 + 1.16916033364217 NA intron (NM_001161365, intron 2 of 9) MTA_Mm|LTR|ERVL-MaLR 33816 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_17_66_0.438596171414895_6.28538727616522_1.16916033364217-4 chr19 46682219 46682628 + 1.16916033364217 NA Intergenic Intergenic -7483 NM_025563 66439 Mm.87163 NM_025563 ENSMUSG00000062376 Borcs7 2010012O05Rik|4930569L17Rik|AI413851|AI467257 BLOC-1 related complex subunit 7 protein-coding common_peak1_17_66_0.438596171414895_6.28538727616522_1.16916033364217 chr11 119418462 119418840 + 1.16916033364217 NA Intergenic Intergenic 28179 NR_035453 100316690 NR_035453 ENSMUSG00000088015 Mir1932 mir-1932|mmu-mir-1932 microRNA 1932 ncRNA common_peak1_17_66_0.438596171414895_6.28538727616522_1.16916033364217-5 chr4 88550420 88550834 + 1.16916033364217 NA Intergenic Intergenic 7618 NM_206870 242517 Mm.377261 NM_206870 ENSMUSG00000096011 Ifna15 Gm12597|Ifnaa|MuIFN-alpha-A|OTTMUSG00000007655 interferon alpha 15 protein-coding common_peak1_11_78_-0.516617591271364_6.04547195254142_1.16907810239195-2 chr9 107587719 107588072 + 1.16907810239195 NA TTS (NM_178020) TTS (NM_178020) 177 NM_025903 15983 Mm.215335 NM_025903 ENSMUSG00000010048 Ifrd2 1810034A24Rik|AA470234|AI838527|SKMc15 interferon-related developmental regulator 2 protein-coding unique_peak2_11_78_-0.516617591271364_6.04547195254142_1.16907810239195 chr1 157066783 157067512 + 1.16907810239195 NA Intergenic Intergenic 41503 NM_001305059 73435 Mm.116705 NM_028540 ENSMUSG00000026592 Tex35 1700057K13Rik testis expressed 35 protein-coding unique_peak2_11_78_-0.516617591271364_6.04547195254142_1.16907810239195-3 chr17 34304231 34304884 + 1.16907810239195 NA Intergenic Intergenic -1310 NM_010382 14969 Mm.22564 NM_010382 ENSMUSG00000060586 H2-Eb1 Eb|H-2Eb|H2Eb|Ia-4|Ia4 histocompatibility 2, class II antigen E beta protein-coding unique_peak2_11_78_-0.516617591271364_6.04547195254142_1.16907810239195-4 chr3 60518464 60519275 + 1.16907810239195 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 17690 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_11_78_-0.516617591271364_6.04547195254142_1.16907810239195 chr2 131239840 131240192 + 1.16907810239195 NA intron (NM_001206382, intron 3 of 7) MIR|SINE|MIR 5953 NM_144888 228607 Mm.287226 NM_144888 ENSMUSG00000037523 Mavs D430028G21Rik|IPS-1|Visa|cardif mitochondrial antiviral signaling protein protein-coding unique_peak2_11_78_-0.516617591271364_6.04547195254142_1.16907810239195-2 chr16 91746182 91746849 + 1.16907810239195 NA intron (NM_010587, intron 1 of 38) intron (NM_010587, intron 1 of 38) 17144 NM_010587 16443 Mm.40546 NM_010587 ENSMUSG00000022957 Itsn1 AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17 intersectin 1 (SH3 domain protein 1A) protein-coding common_peak2_137_1013_0.123365694429809_10.0475247842182_1.16907185132271 chr8 122546560 122549228 + 1.16907185132271 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 3435 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding unique_peak2_39_288_-0.257179143683546_8.04633611065891_1.16907185107863 chr12 91765342 91767188 + 1.16907185107863 NA intron (NM_175367, intron 1 of 6) intron (NM_175367, intron 1 of 6) 20171 NM_175367 108800 Mm.23125 NM_175367 ENSMUSG00000020961 Ston2 4933401N24Rik|AI425999|AW544599 stonin 2 protein-coding common_peak1_39_288_-0.257179143683546_8.04633611065891_1.16907185107863-2 chr17 6743794 6744586 + 1.16907185107863 NA intron (NM_009510, intron 7 of 12) intron (NM_009510, intron 7 of 12) 38360 NM_183368 83672 Mm.442201 NM_031395 ENSMUSG00000041831 Sytl3 A430092N21|Slp3|Slp3-a|Slp3-b|mFLJ00307 synaptotagmin-like 3 protein-coding common_peak1_39_288_-0.257179143683546_8.04633611065891_1.16907185107863 chr15 96696736 96697642 + 1.16907185107863 NA intron (NM_175121, intron 4 of 15) intron (NM_175121, intron 4 of 15) 2509 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_39_200_0.266694847638204_7.78439911499803_1.16896272690572-2 chr16 34690314 34691203 + 1.16896272690572 NA exon (NM_172824, exon 1 of 13) exon (NM_172824, exon 1 of 13) 142 NM_172824 239839 Mm.272045 NM_172824 ENSMUSG00000022833 Ccdc14 G630039H03Rik coiled-coil domain containing 14 protein-coding common_peak1_39_200_0.266694847638204_7.78439911499803_1.16896272690572 chr10 58382444 58383390 + 1.16896272690572 NA intron (NM_201242, intron 1 of 9) intron (NM_201242, intron 1 of 9) -11456 NM_001193303 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak1_55_421_-0.207922127502904_8.61713812495573_1.16814327400813 chr4 32615420 32616123 + 1.16814327400813 NA intron (NM_011997, intron 1 of 10) CpG 298 NM_011997 26885 Mm.22279 NM_011997 ENSMUSG00000028282 Casp8ap2 D4Ertd659e|FLASH caspase 8 associated protein 2 protein-coding common_peak2_55_421_-0.207922127502904_8.61713812495573_1.16814327400813 chr14 29956968 29958580 + 1.16814327400813 NA Intergenic Intergenic -10606 NM_019979 80795 Mm.104491 NM_019979 ENSMUSG00000042682 Selenok 1110001C03Rik|AA673253|HSPC030|Hsp30|Selk selenoprotein K protein-coding common_peak1_142_1252_-0.118980352739433_10.2316805229521_1.16805374470887 chr6 120916108 120917372 + 1.16805374470887 NA promoter-TSS (NM_007544) promoter-TSS (NM_007544) 80 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding unique_peak2_10_72_-0.556639127372422_5.91150499519381_1.16723008420268 chr10 14017204 14017866 + 1.16723008420268 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 51156 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_50_379_-0.22218483120349_8.4587631927292_1.16704765988197 chr11 8424717 8425709 + 1.16704765988197 NA Intergenic Intergenic 239322 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_50_379_-0.22218483120349_8.4587631927292_1.16704765988197-2 chr6 134066018 134067061 + 1.16704765988197 NA intron (NM_001303102, intron 2 of 8) (TG)n|Simple_repeat|Simple_repeat 30839 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak1_50_277_0.22872970440395_8.23330592492548_1.16661181353372 chr13 52985745 52986519 + 1.16661181353372 NA Intergenic Intergenic -5093 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_50_277_0.22872970440395_8.23330592492548_1.16661181353372-2 chr6 122280720 122281616 + 1.16661181353372 NA intron (NM_016970, intron 1 of 4) intron (NM_016970, intron 1 of 4) 1665 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak2_194_1806_-0.0983317543784192_10.7702149136754_1.16655180555032 chr9 88718819 88720997 + 1.16655180555032 NA promoter-TSS (NM_001128601) promoter-TSS (NM_001128601) -110 NM_001128601 100039707 Mm.347377 NM_001128601 ENSMUSG00000079427 Mthfsl Gm2382 5, 10-methenyltetrahydrofolate synthetase-like protein-coding common_peak1_73_580_-0.175998391006763_9.09439515790115_1.1661744169661 chr6 18845216 18846634 + 1.1661744169661 NA Intergenic MMVL30-int|LTR|ERV1 -2710 NM_133939 76522 Mm.275158 NM_133939 ENSMUSG00000044155 Lsm8 2010003I05Rik|AW214405|Naa38 LSM8 homolog, U6 small nuclear RNA associated protein-coding common_peak2_121_1039_-0.131236050795126_9.95674978763089_1.16608667313285 chr15 81510615 81513065 + 1.16608667313285 NA Intergenic Intergenic 45524 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak2_62_366_0.201972907108569_8.6206227063975_1.16593875729207 chr14 61459982 61461661 + 1.16593875729207 NA Intergenic Intergenic -20874 NM_008466 16648 Mm.25548 NM_008466 ENSMUSG00000021929 Kpna3 IPOA4 karyopherin (importin) alpha 3 protein-coding common_peak1_128_1109_-0.126482274830236_10.0531028238223_1.16580342098508 chr11 70239012 70240475 + 1.16580342098508 NA 5' UTR (NM_173742, exon 1 of 3) 5' UTR (NM_173742, exon 1 of 3) 109 NM_173742 52898 Mm.29852 NM_173742 ENSMUSG00000040904 Rnasek 2310033H11Rik|AA571397|D11Bwg0434e ribonuclease, RNase K protein-coding unique_peak2_32_232_-0.2868661969934_7.72075304615758_1.16532840088979 chr2 35999520 36000824 + 1.16532840088979 NA Intergenic Intergenic -20548 NM_029774 74410 Mm.21591 NM_028921 ENSMUSG00000026885 Ttll11 4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e tubulin tyrosine ligase-like family, member 11 protein-coding common_peak1_32_232_-0.2868661969934_7.72075304615758_1.16532840088979 chr17 56268904 56269508 + 1.16532840088979 NA TTS (NM_174989) TTS (NM_174989) 7561 NM_174989 106759 Mm.203952 NM_174989 ENSMUSG00000047123 Ticam1 AW046014|AW547018|TICAM-1|TRIF toll-like receptor adaptor molecule 1 protein-coding common_peak1_197_1839_-0.0974232759438554_10.7967784129724_1.165204007892 chr9 14784033 14785620 + 1.165204007892 NA intron (NM_001310728, intron 1 of 18) CpG 172 NM_018736 17535 Mm.149071 NM_018736 ENSMUSG00000031928 Mre11a Mre11|Mre11b MRE11A homolog A, double strand break repair nuclease protein-coding common_peak1_140_1231_-0.119520937115599_10.2070260721371_1.16517866733273 chr10 67702344 67704298 + 1.16517866733273 NA Intergenic MIR3|SINE|MIR -154366 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak2_329_3060_0.0722505161985652_11.6159125876263_1.16459102180243 chr2 49450463 49453025 + 1.16459102180243 NA 5' UTR (NM_172663, exon 1 of 14) 5' UTR (NM_172663, exon 1 of 14) 258 NM_172663 227867 Mm.29167 NM_172663 ENSMUSG00000069495 Epc2 5830499L14|D2Ertd694e enhancer of polycomb homolog 2 (Drosophila) protein-coding common_peak1_97_652_0.152549366550609_9.42721386482174_1.1643612524354 chr11 114882945 114884515 + 1.1643612524354 NA Intergenic PB1D11|SINE|Alu -6311 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding common_peak1_32_154_0.301195542386642_7.42672217646756_1.16435485258916-2 chr8 9975896 9976469 + 1.16435485258916 NA 5' UTR (NM_176953, exon 1 of 2) 5' UTR (NM_176953, exon 1 of 2) 141 NM_176953 319583 Mm.80584 NM_176953 ENSMUSG00000049717 Lig4 5830471N16Rik|tiny ligase IV, DNA, ATP-dependent protein-coding common_peak1_32_154_0.301195542386642_7.42672217646756_1.16435485258916 chr17 50190004 50190561 + 1.16435485258916 NA 5' UTR (NM_181397, exon 1 of 10) 5' UTR (NM_181397, exon 1 of 10) 215 NM_181397 76438 Mm.41854 NM_181397 ENSMUSG00000039316 Rftn1 2310015N21Rik|AI853526 raftlin lipid raft linker 1 protein-coding common_peak1_32_154_0.301195542386642_7.42672217646756_1.16435485258916-3 chrX 166478967 166479731 + 1.16435485258916 NA intron (NM_019773, intron 1 of 2) intron (NM_019773, intron 1 of 2) 518 NM_019773 56382 Mm.25306 NM_019773 ENSMUSG00000079316 Rab9 2410064E05Rik|AI195561|Rab9a|Sid6061p RAB9, member RAS oncogene family protein-coding unique_peak2_32_154_0.301195542386642_7.42672217646756_1.16435485258916 chr2 68866739 68867978 + 1.16435485258916 NA intron (NM_172856, intron 1 of 9) intron (NM_172856, intron 1 of 9) 5801 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_75_468_0.180144713254228_8.96351646914249_1.16432285917452-2 chr6 124813056 124814684 + 1.16432285917452 NA intron (NM_009415, intron 1 of 6) intron (NM_009415, intron 1 of 6) 426 NM_009415 21991 Mm.4222 NM_009415 ENSMUSG00000023456 Tpi1 AI255506|Tpi|Tpi-1 triosephosphate isomerase 1 protein-coding common_peak2_75_468_0.180144713254228_8.96351646914249_1.16432285917452 chr15 96719435 96721022 + 1.16432285917452 NA Intergenic Intergenic -20530 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_160_1233_0.112870234209561_10.3255617962542_1.164174088473 chr9 32705126 32707150 + 1.164174088473 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 10096 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_28_201_-0.309548168239226_7.50343739863218_1.16403182846023-2 chr15 100422747 100423258 + 1.16403182846023 NA promoter-TSS (NM_001146161) promoter-TSS (NM_001146161) 53 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding common_peak1_28_201_-0.309548168239226_7.50343739863218_1.16403182846023 chr13 33000848 33001540 + 1.16403182846023 NA Intergenic Intergenic -3347 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding common_peak1_28_201_-0.309548168239226_7.50343739863218_1.16403182846023-3 chr7 101357525 101358099 + 1.16403182846023 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) 9743 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_306_2794_0.075558704169584_11.4864119198153_1.16385377423811 chr8 46941606 46944449 + 1.16385377423811 NA Intergenic B1_Mur4|SINE|Alu -43898 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak1_95_785_-0.151385411793798_9.54269279636171_1.16374757790457 chr5 32713264 32714332 + 1.16374757790457 NA Intergenic CpG 71828 NM_177298 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding common_peak1_16_113_-0.429353753190569_6.61821313756946_1.16373426469041 chr11 116580983 116581369 + 1.16373426469041 NA exon (NM_173755, exon 1 of 18) exon (NM_173755, exon 1 of 18) 271 NM_173755 217342 Mm.243950 NM_173755 ENSMUSG00000020802 Ube2o 9630022H21|B230113M03Rik|E2-230K|mKIAA1734 ubiquitin-conjugating enzyme E2O protein-coding unique_peak2_16_113_-0.429353753190569_6.61821313756946_1.16373426469041-2 chr15 73066942 73067589 + 1.16373426469041 NA Intergenic Intergenic -6061 NM_001164643 76510 Mm.158902 NM_029640 ENSMUSG00000047921 Trappc9 1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882 trafficking protein particle complex 9 protein-coding common_peak1_16_113_-0.429353753190569_6.61821313756946_1.16373426469041-2 chr7 106527357 106527763 + 1.16373426469041 NA Intergenic Intergenic -86487 NR_003967 209380 Mm.461779 NM_001001318 Gm4759 EG209380 GTPase, very large interferon inducible 1 pseudogene pseudo unique_peak2_16_113_-0.429353753190569_6.61821313756946_1.16373426469041-3 chr18 67883002 67883639 + 1.16373426469041 NA intron (NM_027556, intron 45 of 45) B3|SINE|B2 -49937 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding unique_peak2_16_113_-0.429353753190569_6.61821313756946_1.16373426469041-4 chr2 28145744 28146512 + 1.16373426469041 NA Intergenic RLTR34C_MM|LTR|ERVK -46965 NM_001038613 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding unique_peak2_16_113_-0.429353753190569_6.61821313756946_1.16373426469041 chr1 74244990 74245921 + 1.16373426469041 NA intron (NM_029711, intron 1 of 9) intron (NM_029711, intron 1 of 9) 8905 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak2_181_1664_-0.102349108052222_10.6501319079325_1.16365030521865 chr2 166994555 166997028 + 1.16365030521865 NA intron (NM_001291160, intron 1 of 11) CpG 508 NM_011490 20853 Mm.73276 NM_011490 ENSMUSG00000039536 Stau1 5830401L18Rik|AW549911|C85792|Stau staufen (RNA binding protein) homolog 1 (Drosophila) protein-coding common_peak1_47_255_0.240387779278452_8.12019388963922_1.16323665245251 chr2 140169987 140170756 + 1.16323665245251 NA promoter-TSS (NM_027093) promoter-TSS (NM_027093) 187 NM_001081090 66580 Mm.21228 NM_001081090 ENSMUSG00000045624 Esf1 2610101J03Rik|ABTAP|AW545818|C79684 ESF1 nucleolar pre-rRNA processing protein homolog protein-coding common_peak2_28_129_0.326295501484114_7.18551556377051_1.1626482530566 chrX 71214902 71215855 + 1.1626482530566 NA intron (NM_019926, intron 1 of 14) intron (NM_019926, intron 1 of 14) 296 NM_019926 17772 Mm.274981 NM_019926 ENSMUSG00000031337 Mtm1 AF073996|Mtm|mKIAA4176 X-linked myotubular myopathy gene 1 protein-coding common_peak1_28_129_0.326295501484114_7.18551556377051_1.1626482530566 chr8 94037154 94037762 + 1.1626482530566 NA promoter-TSS (NM_026623) promoter-TSS (NM_026623) 260 NM_001093757 270086 Mm.251085 NM_177767 ENSMUSG00000033009 Ogfod1 4930415J21Rik|AA387199|AA939912|AW061076|mKIAA1612 2-oxoglutarate and iron-dependent oxygenase domain containing 1 protein-coding common_peak1_23_163_-0.343776536525989_7.18566373635509_1.16264825305655 chr5 62816020 62816446 + 1.16264825305655 NA intron (NM_001170705, intron 1 of 8) intron (NM_001170705, intron 1 of 8) 2410 NM_001170705 100322896 Mm.479821 NM_001170705 ENSMUSG00000090326 Dthd1 Gm17384 death domain containing 1 protein-coding unique_peak2_23_163_-0.343776536525989_7.18566373635509_1.16264825305655 chr6 59422079 59423313 + 1.16264825305655 NA intron (NM_183183, intron 1 of 1) intron (NM_183183, intron 1 of 1) 3594 NM_183183 243385 Mm.138080 NM_183183 ENSMUSG00000045441 Gprin3 C030038J10Rik|C730021L23 GPRIN family member 3 protein-coding common_peak2_108_910_-0.139565008272415_9.76152473966584_1.16257123353981 chr12 8657462 8660567 + 1.16257123353981 NA Intergenic Intergenic -15120 NM_001160221 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding common_peak1_52_395_-0.213614854636498_8.52254919276136_1.16213146084846-2 chr13 67128146 67128876 + 1.16213146084846 NA intron (NM_172392, intron 1 of 3) intron (NM_172392, intron 1 of 3) 283 NM_172392 268670 Mm.56274 NM_172392 ENSMUSG00000057396 Zfp759 BC028265|Rslcan-8|Rslcan8 zinc finger protein 759 protein-coding common_peak1_52_395_-0.213614854636498_8.52254919276136_1.16213146084846-4 chr7 122939991 122941069 + 1.16213146084846 NA Intergenic Intergenic 29929 NR_045614 73951 Mm.389936 NR_045614 4930413G21Rik - RIKEN cDNA 4930413G21 gene ncRNA common_peak1_52_395_-0.213614854636498_8.52254919276136_1.16213146084846-3 chr14 65102245 65103408 + 1.16213146084846 NA Intergenic Intergenic -4720 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak1_52_395_-0.213614854636498_8.52254919276136_1.16213146084846 chr11 86606883 86607698 + 1.16213146084846 NA exon (NM_029478, exon 9 of 12) exon (NM_029478, exon 9 of 12) -23132 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_108_748_0.142920327070886_9.62028207199419_1.1618457211573 chr3 63963506 63964795 + 1.1618457211573 NA exon (NM_001272035, exon 1 of 7) exon (NM_001272035, exon 1 of 7) 583 NM_001272035 11416 Mm.135619 NM_015728 ENSMUSG00000027822 Slc33a1 AI315656|AI788741|Acatn|D630022N01Rik solute carrier family 33 (acetyl-CoA transporter), member 1 protein-coding common_peak1_77_485_0.174743257188437_9.0121841322_1.16176876172576 chr11 100472025 100472881 + 1.16176876172576 NA exon (NM_172565, exon 1 of 2) exon (NM_172565, exon 1 of 2) 329 NM_172565 217194 Mm.183320 NM_172565 ENSMUSG00000048732 Klhl11 BC011167 kelch-like 11 protein-coding unique_peak2_16_61_0.449339950587297_6.17886628568052_1.1616210394491 chr14 69503500 69503888 + 1.1616210394491 NA Intergenic Intergenic 8855 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding common_peak1_16_61_0.449339950587297_6.17886628568052_1.1616210394491-4 chr4 122870060 122870510 + 1.1616210394491 NA intron (NM_001301067, intron 3 of 12) B3A|SINE|B2 15772 NM_007598 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak1_16_61_0.449339950587297_6.17886628568052_1.1616210394491-2 chr11 105589828 105590265 + 1.1616210394491 NA promoter-TSS (NM_181071) promoter-TSS (NM_181071) 60 NM_181071 77097 Mm.22501 NM_175492 ENSMUSG00000053580 Tanc2 3526402J09Rik|5730590C14Rik tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding common_peak1_16_61_0.449339950587297_6.17886628568052_1.1616210394491-3 chr15 57921225 57921628 + 1.1616210394491 NA intron (NM_001167679, intron 3 of 17) intron (NM_001167679, intron 3 of 17) 9227 NM_001167679 210544 Mm.390835 NM_199300 ENSMUSG00000022364 Tbc1d31 4B3|D330013L20Rik|Gm85|Wdr67 TBC1 domain family, member 31 protein-coding common_peak1_16_61_0.449339950587297_6.17886628568052_1.1616210394491 chr1 171686247 171686684 + 1.1616210394491 NA intron (NM_007649, intron 1 of 3) MT2B1|LTR|ERVL 4410 NM_007649 12506 Mm.1738 NM_007649 ENSMUSG00000015355 Cd48 AI449234|AW610730|BCM1|BLAST|BLAST-1|BLAST1|Bcm-1|MEM-102|SLAMF2|Sgp-60 CD48 antigen protein-coding unique_peak2_12_85_-0.497455821247521_6.17753684407834_1.16162103944909 chr2 131096169 131096781 + 1.16162103944909 NA Intergenic GA-rich|Low_complexity|Low_complexity -9710 NM_011426 20612 Mm.1374 NM_011426 ENSMUSG00000027322 Siglec1 Cd169|Siglec-1|Sn sialic acid binding Ig-like lectin 1, sialoadhesin protein-coding common_peak1_12_85_-0.497455821247521_6.17753684407834_1.16162103944909-2 chr19 57076548 57076829 + 1.16162103944909 NA intron (NM_001103178, intron 4 of 19) intron (NM_001103178, intron 4 of 19) 42336 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_12_85_-0.497455821247521_6.17753684407834_1.16162103944909 chr13 45924746 45925148 + 1.16162103944909 NA intron (NM_009124, intron 2 of 7) intron (NM_009124, intron 2 of 7) 40044 NM_001199304 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1 ataxin 1 protein-coding common_peak2_79_501_0.172815296052717_9.05795120197713_1.16140055527416 chr7 80917572 80920049 + 1.16140055527416 NA intron (NM_019951, intron 4 of 5) intron (NM_019951, intron 4 of 5) -13748 NM_001291280 68039 Mm.22246 NM_026523 ENSMUSG00000025723 Nmb 3110023K12Rik neuromedin B protein-coding common_peak1_91_601_0.158065749706521_9.31265255161296_1.16136579062548 chr17 50569466 50570658 + 1.16136579062548 NA intron (NM_013880, intron 1 of 5) Lx9|LINE|L1 60515 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak2_106_890_-0.140311202166149_9.72912602043885_1.16125738127084 chr4 141792718 141794564 + 1.16125738127084 NA promoter-TSS (NM_015733) promoter-TSS (NM_015733) 29 NM_001277932 12371 Mm.88829 NM_015733 ENSMUSG00000028914 Casp9 AI115399|APAF-3|AW493809|CASP-9|Caspase-9|ICE-LAP6|Mch6 caspase 9 protein-coding common_peak1_195_1817_-0.0980356249107111_10.7791186717388_1.1611340989294 chr11 63984059 63986289 + 1.1611340989294 NA intron (NM_178379, intron 5 of 6) ORR1D1|LTR|ERVL-MaLR 20948 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak2_64_382_0.195713938407939_8.67905755112893_1.16105345929577 chr2 30718069 30719525 + 1.16105345929577 NA Intergenic Intergenic -2413 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_64_382_0.195713938407939_8.67905755112893_1.16105345929577 chr17 27839292 27839945 + 1.16105345929577 NA promoter-TSS (NM_011432) promoter-TSS (NM_011432) -469 NM_011432 20630 Mm.103949 NM_011432 ENSMUSG00000024217 Snrpc Snrp1c|U1-C|U1C U1 small nuclear ribonucleoprotein C protein-coding common_peak1_143_1262_-0.118116628355818_10.2435806096096_1.16090207274321 chr9 56994665 56996046 + 1.16090207274321 NA 5' UTR (NM_019651, exon 1 of 13) 5' UTR (NM_019651, exon 1 of 13) 387 NM_019651 56294 Mm.325643 NM_019651 ENSMUSG00000032290 Ptpn9 MEG2 protein tyrosine phosphatase, non-receptor type 9 protein-coding common_peak2_44_328_-0.23576513617061_8.24406120564994_1.16089533178354 chr10 59589327 59590528 + 1.16089533178354 NA intron (NM_001033259, intron 1 of 7) MLT1N2|LTR|ERVL-MaLR 26765 NM_001033259 215999 Mm.296470 NM_001033259 ENSMUSG00000009647 Mcu 2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64 mitochondrial calcium uniporter protein-coding common_peak1_23_99_0.36991927831737_6.82881582893341_1.16068078470875 chr7 98341486 98342053 + 1.16068078470875 NA Intergenic Intergenic 19519 NM_001168540 244152 Mm.25317 NM_001024619 ENSMUSG00000049580 Tsku 9530051K01Rik|E2ig4|Lrrc54|Tsk tsukushi, small leucine rich proteoglycan protein-coding unique_peak2_23_99_0.36991927831737_6.82881582893341_1.16068078470875 chr9 21165680 21166319 + 1.16068078470875 NA exon (NM_183408, exon 1 of 15) exon (NM_183408, exon 1 of 15) 285 NM_183408 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding common_peak1_66_517_-0.186264587536831_8.92367599391814_1.16037253126934 chr4 149758764 149759799 + 1.16037253126934 NA intron (NM_027460, intron 2 of 6) intron (NM_027460, intron 2 of 6) 14986 NM_027460 70556 Mm.41877 NM_027460 ENSMUSG00000028982 Slc25a33 5730438N18Rik|Pnc1 solute carrier family 25, member 33 protein-coding common_peak1_153_1366_-0.113463675646639_10.3600656897827_1.16025683804981 chr13 24500921 24502533 + 1.16025683804981 NA Intergenic Intergenic -80462 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_15_106_-0.445213723275979_6.51886012476316_1.15977136895349 chr10 98785735 98786076 + 1.15977136895349 NA Intergenic Intergenic -129247 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding unique_peak2_15_106_-0.445213723275979_6.51886012476316_1.15977136895349 chr19 46050003 46050670 + 1.15977136895349 NA Intergenic Intergenic -5125 NM_001113408 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding common_peak2_38_279_-0.256339567337107_8.00111323327641_1.15929281623172 chr2 32917768 32918704 + 1.15929281623172 NA intron (NM_146119, intron 5 of 13) ID4_|SINE|ID 42102 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak2_44_234_0.249661690999632_8.00134779206482_1.15929281623172 chr6 127266132 127267026 + 1.15929281623172 NA Intergenic Intergenic 41388 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak2_288_2884_-0.0770870999642455_11.4558120535507_1.15909211195292 chr1 171642291 171649675 + 1.15909211195292 NA intron (NM_144539, intron 2 of 7) intron (NM_144539, intron 2 of 7) -4083 NR_106151 102465784 NR_106151 ENSMUSG00000098316 Mir7683 Gm27950|mmu-mir-7683 microRNA 7683 ncRNA common_peak1_66_397_0.193919079606074_8.73358416034669_1.15906822409047 chr9 108460330 108461132 + 1.15906822409047 NA intron (NM_133744, intron 1 of 1) CpG 213 NM_133744 72454 Mm.46488 NM_133744 ENSMUSG00000049305 Ccdc71 2600016J21Rik coiled-coil domain containing 71 protein-coding common_peak1_288_2590_0.0779752033885064_11.3782809018743_1.15851076787037 chr6 50377306 50380302 + 1.15851076787037 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) 4033 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_122_1048_-0.129221181358558_9.97018837189799_1.15832320235518 chr4 133583512 133585172 + 1.15832320235518 NA promoter-TSS (NM_001290742) promoter-TSS (NM_001290742) -31 NM_001290742 100210 Mm.274001 NM_133884 ENSMUSG00000028848 Gpn2 AI838661|Atpbd1b|R74630 GPN-loop GTPase 2 protein-coding common_peak1_13_92_-0.479206372276461_6.2995556249698_1.15814843603168 chr7 38084523 38084837 + 1.15814843603168 NA Intergenic Intergenic 22810 NM_007633 12447 Mm.16110 NM_007633 ENSMUSG00000002068 Ccne1 AW538188|CycE1 cyclin E1 protein-coding unique_peak2_13_92_-0.479206372276461_6.2995556249698_1.15814843603168-2 chr9 62440067 62440760 + 1.15814843603168 NA intron (NM_175484, intron 3 of 11) RLTR4_MM-int|LTR|ERV1 96631 NM_175484 235431 Mm.335229 NM_175484 ENSMUSG00000041729 Coro2b CLIPINC|E130012P22Rik coronin, actin binding protein, 2B protein-coding unique_peak2_13_92_-0.479206372276461_6.2995556249698_1.15814843603168 chr16 21787371 21788007 + 1.15814843603168 NA intron (NM_023737, intron 1 of 6) intron (NM_023737, intron 1 of 6) 145 NM_023737 74147 Mm.28100 NM_023737 ENSMUSG00000022853 Ehhadh 1300002P22Rik|HD|L-PBE|LBFP|LBP|MFP|MFP1|PBFE enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase protein-coding unique_peak1_12_41_0.536491510675816_5.66056317811667_1.15813009484044 chr8 25066206 25066598 + 1.15813009484044 NA intron (NM_031257, intron 3 of 11) intron (NM_031257, intron 3 of 11) -27440 NM_001081187 330723 Mm.334452 NM_001081187 ENSMUSG00000037406 Htra4 B430206E18Rik HtrA serine peptidase 4 protein-coding common_peak1_12_41_0.536491510675816_5.66056317811667_1.15813009484044-3 chr9 100521345 100521751 + 1.15813009484044 NA intron (NM_010878, intron 1 of 3) intron (NM_010878, intron 1 of 3) 24505 NM_010878 17973 Mm.181485 NM_010878 ENSMUSG00000032475 Nck1 6330586M15Rik|D230010O13Rik|Nck|Nck-1 non-catalytic region of tyrosine kinase adaptor protein 1 protein-coding common_peak1_12_41_0.536491510675816_5.66056317811667_1.15813009484044 chr17 47609848 47610193 + 1.15813009484044 NA intron (NM_016859, intron 1 of 6) intron (NM_016859, intron 1 of 6) 1472 NM_016859 53414 Mm.472101 NM_016859 ENSMUSG00000023988 Bysl Bys|Enp1 bystin-like protein-coding common_peak1_12_41_0.536491510675816_5.66056317811667_1.15813009484044-2 chr4 11961069 11961399 + 1.15813009484044 NA exon (NM_001033453, exon 2 of 2) exon (NM_001033453, exon 2 of 2) 4479 NM_001098231 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding unique_peak2_14_99_-0.461812068363376_6.41295015559304_1.15774943572109-2 chr11 34833584 34834310 + 1.15774943572109 NA promoter-TSS (NM_027411) promoter-TSS (NM_027411) -306 NM_027411 70385 Mm.194368 NM_027411 ENSMUSG00000069910 Spdl1 1700018I02Rik|2600001J17Rik|2810049B11Rik|AA409762|Ccdc99 spindle apparatus coiled-coil protein 1 protein-coding unique_peak2_14_99_-0.461812068363376_6.41295015559304_1.15774943572109 chr1 164956632 164957544 + 1.15774943572109 NA Intergenic Intergenic -21578 NM_008510 16963 Mm.190 NM_008510 ENSMUSG00000026573 Xcl1 AI661682|ATAC|LTN|Lptn|SCM-1|SCM-1a|Scyc1 chemokine (C motif) ligand 1 protein-coding common_peak1_14_99_-0.461812068363376_6.41295015559304_1.15774943572109-3 chr2 131160235 131160608 + 1.15774943572109 NA promoter-TSS (NM_001311138) promoter-TSS (NM_001311138) -340 NM_001311138 67326 Mm.27711 NM_026091 ENSMUSG00000027327 1700037H04Rik - RIKEN cDNA 1700037H04 gene protein-coding common_peak1_14_99_-0.461812068363376_6.41295015559304_1.15774943572109-2 chr17 15395799 15396127 + 1.15774943572109 NA promoter-TSS (NM_024203) promoter-TSS (NM_024203) -239 NR_033586 67544 Mm.35039 NM_024203 ENSMUSG00000014763 Fam120b 4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838 family with sequence similarity 120, member B protein-coding common_peak1_14_99_-0.461812068363376_6.41295015559304_1.15774943572109 chr15 80801675 80802050 + 1.15774943572109 NA intron (NM_177124, intron 1 of 21) intron (NM_177124, intron 1 of 21) 3252 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak1_182_1452_0.103834979567415_10.5567364774165_1.15748184048471 chr17 21679033 21680531 + 1.15748184048471 NA Intergenic Intergenic -10430 NR_045766 100310809 Mm.293030 NR_045766 Gm10509 ENSMUSG00000073448 zinc finger protein 51 pseudogene pseudo common_peak2_68_535_-0.183493870210977_8.97434225535228_1.15745551844624 chr10 128269976 128271107 + 1.15745551844624 NA promoter-TSS (NM_019963) promoter-TSS (NM_019963) -35 NM_019963 20847 Mm.293120 NM_019963 ENSMUSG00000040033 Stat2 1600010G07Rik|AW496480 signal transducer and activator of transcription 2 protein-coding common_peak1_345_3577_-0.0691148293730013_11.7703802573654_1.15739408653565 chr7 101969428 101971891 + 1.15739408653565 NA intron (NM_133947, intron 1 of 24) intron (NM_133947, intron 1 of 24) 816 NM_133947 101706 Mm.27259 NM_133947 ENSMUSG00000066306 Numa1 6720401E04Rik|AA764025|AL022610|AU014979|NuMA nuclear mitotic apparatus protein 1 protein-coding common_peak1_156_1397_-0.111673010969787_10.3933121398905_1.15732056117636 chr12 85973099 85974592 + 1.15732056117636 NA intron (NM_001081423, intron 29 of 33) intron (NM_001081423, intron 29 of 33) 105196 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak2_224_1888_0.090877238054583_10.9288456054157_1.15729121458111 chr5 33819577 33822826 + 1.15729121458111 NA Intergenic CpG -21911 NM_175231 107823 Mm.19892 NM_175231 ENSMUSG00000057406 Whsc1 5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|NSD2|Whsc1l|mKIAA1090 Wolf-Hirschhorn syndrome candidate 1 (human) protein-coding common_peak1_122_874_0.13243857449902_9.8393584939692_1.15725017113283 chr10 83329462 83331210 + 1.15725017113283 NA intron (NM_177388, intron 1 of 10) intron (NM_177388, intron 1 of 10) 7481 NM_177388 338365 Mm.67073 NM_177388 ENSMUSG00000034591 Slc41a2 A230035L05Rik|SLC41A1-L1 solute carrier family 41, member 2 protein-coding common_peak1_38_193_0.273030607420733_7.73642814589749_1.15720678097253 chr4 6190895 6191599 + 1.15720678097253 NA intron (NM_026534, intron 1 of 7) CpG 142 NM_026534 68053 Mm.404043 NM_026534 ENSMUSG00000028243 Ubxn2b 3110003A22Rik|6430407D20Rik|AI451665|p37 UBX domain protein 2B protein-coding common_peak1_59_456_-0.20078161127401_8.73565954942107_1.15705566460364 chr8 123025678 123026927 + 1.15705566460364 NA intron (NR_037865, intron 1 of 13) B1F|SINE|Alu 15982 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak2_227_1920_0.0900815382573601_10.9526825727942_1.15689074972423 chr11 80076805 80081968 + 1.15689074972423 NA intron (NM_018776, intron 1 of 7) B1_Mus1|SINE|Alu 1605 NM_001277106 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding common_peak1_254_2212_0.0839886282047662_11.1537820499034_1.15659333768616 chr9 90256773 90259717 + 1.15659333768616 NA intron (NM_194334, intron 1 of 12) intron (NM_194334, intron 1 of 12) 12524 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak1_134_1169_-0.121979660752851_10.1313029840943_1.15632168555089 chr3 40799391 40800886 + 1.15632168555089 NA non-coding (NR_045576, exon 1 of 16) non-coding (NR_045576, exon 1 of 16) 187 NR_045576 20873 Mm.3794 NM_011495 ENSMUSG00000025758 Plk4 1700028H20|AI385771|Sak|Stk18 polo-like kinase 4 protein-coding common_peak1_15_56_0.463363248960427_6.06457163864495_1.15609038776772-2 chr1 191193335 191193696 + 1.15609038776772 NA Intergenic Intergenic -10182 NM_007498 11910 Mm.2706 NM_007498 ENSMUSG00000026628 Atf3 LRG-21 activating transcription factor 3 protein-coding common_peak1_15_56_0.463363248960427_6.06457163864495_1.15609038776772-3 chr10 78458564 78458978 + 1.15609038776772 NA intron (NM_172134, intron 1 of 10) intron (NM_172134, intron 1 of 10) 6177 NM_172134 216134 Mm.206159 NM_172134 ENSMUSG00000032788 Pdxk 2310036D04Rik|AA119688|C77999 pyridoxal (pyridoxine, vitamin B6) kinase protein-coding common_peak1_15_56_0.463363248960427_6.06457163864495_1.15609038776772-4 chr5 149246906 149247189 + 1.15609038776772 NA Intergenic Intergenic -17957 NM_001308462 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding common_peak1_15_56_0.463363248960427_6.06457163864495_1.15609038776772-5 chr6 90748077 90748409 + 1.15609038776772 NA intron (NM_001134384, intron 1 of 13) intron (NM_001134384, intron 1 of 13) -31714 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_15_56_0.463363248960427_6.06457163864495_1.15609038776772-6 chr6 120912905 120913308 + 1.15609038776772 NA intron (NM_007544, intron 1 of 5) intron (NM_007544, intron 1 of 5) 3714 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding common_peak1_15_56_0.463363248960427_6.06457163864495_1.15609038776772 chr1 87648324 87648680 + 1.15609038776772 NA intron (NR_122078, intron 2 of 27) ID_B1|SINE|B4 28190 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak2_113_793_0.138115833593574_9.70205311393974_1.15601751956394 chr16 3908065 3909719 + 1.15601751956394 NA promoter-TSS (NM_029738) promoter-TSS (NM_029738) -117 NM_029738 76779 Mm.458921 NM_029738 ENSMUSG00000014232 Cluap1 2310030D15Rik|2610111M03Rik clusterin associated protein 1 protein-coding common_peak2_68_413_0.18910836274747_8.78804113887306_1.15577628009481 chr2 38535216 38536600 + 1.15577628009481 NA intron (NM_001159631, intron 1 of 9) MIR|SINE|MIR 24032 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak1_70_553_-0.180582620202172_9.0234508559481_1.15515204050799-2 chr2 79048616 79049753 + 1.15515204050799 NA Intergenic Intergenic 180137 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_70_553_-0.180582620202172_9.0234508559481_1.15515204050799 chr1 40475239 40475886 + 1.15515204050799 NA intron (NM_001161843, intron 4 of 9) IMPB_01|Satellite|Satellite 9556 NM_008365 16182 Mm.253664 NM_008365 ENSMUSG00000026070 Il18r1 Il18ralpha|Il1rrp interleukin 18 receptor 1 protein-coding common_peak1_27_193_-0.313348092169202_7.44323879610253_1.15442245543603 chr6 125572850 125573451 + 1.15442245543603 NA intron (NM_011708, intron 6 of 51) intron (NM_011708, intron 6 of 51) 20202 NM_011708 22371 Mm.22339 NM_011708 ENSMUSG00000001930 Vwf 6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD Von Willebrand factor protein-coding common_peak1_31_224_-0.290915616905513_7.66832338276428_1.15395722650461 chr4 117550282 117550884 + 1.15395722650461 NA 5' UTR (NM_080469, exon 1 of 9) 5' UTR (NM_080469, exon 1 of 9) 218 NM_080469 140546 Mm.235891 NM_080469 ENSMUSG00000033423 Eri3 PINT1|Prnpip1 exoribonuclease 3 protein-coding common_peak2_109_919_-0.137586721372104_9.77669669025832_1.15372828157064 chr11 78696522 78698225 + 1.15372828157064 NA promoter-TSS (NM_008702) promoter-TSS (NM_008702) 52 NM_008702 18099 Mm.9001 NM_008702 ENSMUSG00000017376 Nlk AI194375 nemo like kinase protein-coding common_peak2_280_2788_-0.0779407318272511_11.4065618531147_1.15356562507208 chr9 106786871 106790076 + 1.15356562507208 NA intron (NM_030730, intron 1 of 21) intron (NM_030730, intron 1 of 21) 740 NM_030730 81000 Mm.246689 NM_030730 ENSMUSG00000040661 Rad54l2 Arip4|D130058C05|G630026H09Rik|Srisnf2l RAD54 like 2 (S. cerevisiae) protein-coding common_peak1_13_46_0.505363587153933_5.8072706452546_1.1534274303752 chr1 13266342 13266720 + 1.1534274303752 NA intron (NM_001302702, intron 2 of 21) intron (NM_001302702, intron 2 of 21) 105898 NM_001302702 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding common_peak1_13_46_0.505363587153933_5.8072706452546_1.1534274303752-3 chr5 53491399 53491792 + 1.1534274303752 NA Intergenic MIR|SINE|MIR -64184 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak1_13_46_0.505363587153933_5.8072706452546_1.1534274303752-2 chr3 69465018 69465386 + 1.1534274303752 NA intron (NM_178726, intron 1 of 3) intron (NM_178726, intron 1 of 3) 133758 NM_020026 26879 Mm.153710 NM_020026 ENSMUSG00000043300 B3galnt1 B3galt3|b3GT3 UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1 protein-coding common_peak1_72_571_-0.177552310392761_9.07109518158201_1.15340220316282 chr3 122274144 122274982 + 1.15340220316282 NA intron (NM_153806, intron 1 of 6) CpG 149 NM_153806 99480 Mm.398647 NM_153806 ENSMUSG00000039756 Dnttip2 4930588M11Rik|AA408582|AU014960|HSU15552 deoxynucleotidyltransferase, terminal, interacting protein 2 protein-coding common_peak2_70_429_0.184966696257558_8.84067619771824_1.15319513115481 chr9 108460055 108461222 + 1.15319513115481 NA intron (NM_133744, intron 1 of 1) CpG 120 NM_133744 72454 Mm.46488 NM_133744 ENSMUSG00000049305 Ccdc71 2600016J21Rik coiled-coil domain containing 71 protein-coding common_peak1_14_51_0.481604403270256_5.94124191977622_1.15310826766849-4 chr7 30736972 30737428 + 1.15310826766849 NA intron (NM_001290631, intron 2 of 10) RSINE1|SINE|B4 2207 NM_008085 14447 Mm.436562 NM_008085 ENSMUSG00000061099 Gapdhs Gapd-s|Gapds glyceraldehyde-3-phosphate dehydrogenase, spermatogenic protein-coding common_peak1_14_51_0.481604403270256_5.94124191977622_1.15310826766849 chr12 25367851 25368261 + 1.15310826766849 NA Intergenic Intergenic 238882 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_14_51_0.481604403270256_5.94124191977622_1.15310826766849-3 chr13 119429830 119430240 + 1.15310826766849 NA intron (NM_145457, intron 1 of 10) intron (NM_145457, intron 1 of 10) 1133 NM_145457 218693 Mm.490243 NM_145457 ENSMUSG00000025451 Paip1 PAIP-1 polyadenylate binding protein-interacting protein 1 protein-coding common_peak1_14_51_0.481604403270256_5.94124191977622_1.15310826766849-5 chr7 90304594 90304995 + 1.15310826766849 NA intron (NM_001289583, intron 1 of 19) B2_Mm2|SINE|B2 2439 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_14_51_0.481604403270256_5.94124191977622_1.15310826766849-6 chr9 118456682 118457112 + 1.15310826766849 NA Intergenic Intergenic -21292 NM_001164789 13813 Mm.200692 NM_010136 ENSMUSG00000032446 Eomes C77258|TBR-2|Tbr2 eomesodermin protein-coding common_peak1_14_51_0.481604403270256_5.94124191977622_1.15310826766849-2 chr13 30911475 30911764 + 1.15310826766849 NA intron (NM_025588, intron 6 of 27) intron (NM_025588, intron 6 of 27) 36142 NM_153072 210554 Mm.450571 NM_153072 ENSMUSG00000076430 Hus1b - HUS1 checkpoint clamp component B protein-coding common_peak1_132_1149_-0.123517833169377_10.105659229247_1.15303167694629 chr3 30863918 30865333 + 1.15303167694629 NA intron (NM_001286994, intron 1 of 3) intron (NM_001286994, intron 1 of 3) 8675 NM_001286994 71862 Mm.272019 NM_027965 ENSMUSG00000037661 Gpr160 1700025D19Rik|GPCR150 G protein-coupled receptor 160 protein-coding common_peak1_49_270_0.23047846196887_8.1973882723383_1.15284019129172-2 chr17 34849389 34850162 + 1.15284019129172 NA promoter-TSS (NM_138580) promoter-TSS (NM_138580) 429 NM_021337 108077 Mm.18845 NM_021337 ENSMUSG00000040356 Skiv2l 4930534J06Rik|AW214248|Ddx13|SKI|Ski2w superkiller viralicidic activity 2-like (S. cerevisiae) protein-coding common_peak1_49_270_0.23047846196887_8.1973882723383_1.15284019129172 chr13 49247411 49248467 + 1.15284019129172 NA intron (NM_028340, intron 1 of 4) CpG 224 NM_025491 66329 Mm.34308 NM_025491 ENSMUSG00000021384 Susd3 1700017I11Rik|2810440J20Rik sushi domain containing 3 protein-coding common_peak2_137_1200_-0.120812804272484_10.1696140335694_1.15148945397489 chr3 40799200 40801043 + 1.15148945397489 NA non-coding (NR_045576, exon 1 of 16) non-coding (NR_045576, exon 1 of 16) 170 NR_045576 20873 Mm.3794 NM_011495 ENSMUSG00000025758 Plk4 1700028H20|AI385771|Sak|Stk18 polo-like kinase 4 protein-coding common_peak1_76_607_-0.171205972670519_9.16232452710832_1.15136047658045 chr17 31519989 31520717 + 1.15136047658045 NA intron (NM_030087, intron 1 of 3) intron (NM_030087, intron 1 of 3) 238 NM_001083891 78330 Mm.28349 NM_030087 ENSMUSG00000024038 Ndufv3 1500032D16Rik NADH dehydrogenase (ubiquinone) flavoprotein 3 protein-coding common_peak1_72_445_0.181419126465324_8.89160946315297_1.15125067208233-2 chr16 92814431 92815859 + 1.15125067208233 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 10929 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_72_445_0.181419126465324_8.89160946315297_1.15125067208233 chr12 108645630 108646432 + 1.15125067208233 NA intron (NM_001163396, intron 2 of 14) intron (NM_001163396, intron 2 of 14) 10278 NM_001163396 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774 Ena-vasodilator stimulated phosphoprotein protein-coding common_peak1_125_902_0.129639293657281_9.8834018243095_1.15107002856467 chr5 142439714 142440834 + 1.15107002856467 NA intron (NM_199068, intron 2 of 8) intron (NM_199068, intron 2 of 8) -23657 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding unique_peak2_56_429_-0.203694130039286_8.64634578456982_1.15081576616471 chr15 80613394 80615338 + 1.15081576616471 NA intron (NM_001289442, intron 1 of 7) intron (NM_001289442, intron 1 of 7) -9117 NM_010815 17444 Mm.12947 NM_010815 ENSMUSG00000042351 Grap2 GRAP-2|GRB2L|GRBLG|GRID|Gads|GrbX|Grf40|GrpL|Mona|P38 GRB2-related adaptor protein 2 protein-coding common_peak2_56_429_-0.203694130039286_8.64634578456982_1.15081576616471 chr5 121330525 121331532 + 1.15081576616471 NA intron (NM_181421, intron 49 of 75) intron (NM_181421, intron 49 of 75) 54587 NM_001163470 231712 Mm.20488 NM_172275 ENSMUSG00000042726 Trafd1 1110008K06Rik|Fln29 TRAF type zinc finger domain containing 1 protein-coding common_peak1_397_4230_-0.0631888653225747_12.0151885376951_1.15080353046152 chr2 32150587 32153648 + 1.15080353046152 NA intron (NM_001159634, intron 1 of 31) intron (NM_001159634, intron 1 of 31) 969 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak2_90_737_-0.155131963340349_9.44991102439022_1.15078186019014 chr3 51483087 51484927 + 1.15078186019014 NA promoter-TSS (NM_016858) promoter-TSS (NM_016858) 41 NM_016858 19338 Mm.1664 NM_016858 ENSMUSG00000027739 Rab33b - RAB33B, member RAS oncogene family protein-coding common_peak1_22_156_-0.356159944798117_7.11654077649257_1.15059212292305-2 chr8 108715039 108715552 + 1.15059212292305 NA 5' UTR (NM_007496, exon 1 of 10) 5' UTR (NM_007496, exon 1 of 10) 651 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_27_123_0.33236843963105_7.1203805302024_1.15059212292305 chr1 127251056 127251623 + 1.15059212292305 NA intron (NM_145128, intron 2 of 17) intron (NM_145128, intron 2 of 17) 46353 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_22_156_-0.356159944798117_7.11654077649257_1.15059212292305 chr4 124937045 124937580 + 1.15059212292305 NA promoter-TSS (NM_026560) promoter-TSS (NM_026560) 264 NM_177573 194268 Mm.266907 NM_177573 9930104L06Rik - RIKEN cDNA 9930104L06 gene protein-coding common_peak1_27_123_0.33236843963105_7.1203805302024_1.15059212292305-2 chr4 119738677 119739333 + 1.15059212292305 NA Intergenic Intergenic -75673 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak2_170_1545_-0.10569136822139_10.5414789198142_1.15058043823335 chr13 37856896 37859182 + 1.15058043823335 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) -30395 NR_033218 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_31_148_0.303697053849363_7.37101704738684_1.15035807857415 chr10 60081319 60081957 + 1.15035807857415 NA intron (NM_026937, intron 9 of 10) intron (NM_026937, intron 9 of 10) -24619 NM_052994 94214 Mm.153429 NM_052994 ENSMUSG00000058297 Spock2 AA407235|Gcap26|mKIAA0275 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 protein-coding common_peak2_31_148_0.303697053849363_7.37101704738684_1.15035807857415 chr12 24823080 24823995 + 1.15035807857415 NA Intergenic PB1D10|SINE|Alu -8062 NM_026037 67216 Mm.167671 NM_026037 ENSMUSG00000020646 Mboat2 2810049G06Rik|AU022889|AW547221|LPCAT4|Moact2|Oact2 membrane bound O-acyltransferase domain containing 2 protein-coding common_peak1_46_345_-0.231497140210708_8.31887965753137_1.15012638476187 chr6 48724973 48725798 + 1.15012638476187 NA TTS (NM_146167) TTS (NM_146167) 6764 NM_146167 231932 Mm.30479 NM_146167 ENSMUSG00000043931 Gimap7 IAN7|Ian3 GTPase, IMAP family member 7 protein-coding common_peak1_74_461_0.178400666873609_8.94094937485286_1.14987875479355 chr11 95366821 95368155 + 1.14987875479355 NA intron (NM_172543, intron 2 of 7) intron (NM_172543, intron 2 of 7) -17434 NM_016752 110172 Mm.4593 NM_016752 ENSMUSG00000020873 Slc35b1 Ugalt2 solute carrier family 35, member B1 protein-coding common_peak1_165_1491_-0.106913639900533_10.489575000305_1.14957627294567 chr11 70451593 70452998 + 1.14957627294567 NA exon (NM_025397, exon 2 of 3) exon (NM_025397, exon 2 of 3) 364 NM_025397 66172 Mm.46424 NM_025397 ENSMUSG00000018923 Med11 1110030J09Rik|AI465144|AW545069 mediator complex subunit 11 protein-coding unique_peak2_51_387_-0.217879286359839_8.49097319900721_1.1477943840673 chr9 14295553 14297461 + 1.1477943840673 NA intron (NM_030261, intron 1 of 9) Tigger5|DNA|TcMar-Tigger 20206 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak2_103_861_-0.142898192075455_9.68009496305137_1.14773686531075 chr3 79590564 79592255 + 1.14773686531075 NA promoter-TSS (NM_026352) promoter-TSS (NM_026352) 20 NM_026352 67738 Mm.295252 NM_026352 ENSMUSG00000027804 Ppid 4930564J03Rik|CYP-40|Ppidl|Ppif peptidylprolyl isomerase D (cyclophilin D) protein-coding common_peak1_65_508_-0.187589587228459_8.89772705246147_1.14768467249477 chr2 84424786 84425954 + 1.14768467249477 NA promoter-TSS (NM_018782) promoter-TSS (NM_018782) -104 NM_018782 54598 Mm.75467 NM_018782 ENSMUSG00000059588 Calcrl AV071593|CRLR calcitonin receptor-like protein-coding common_peak2_241_2071_0.0863708681352495_11.0599937217542_1.14722452975549 chr10 108116680 108120644 + 1.14722452975549 NA Intergenic Intergenic -43738 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak1_121_1038_-0.129848176670883_9.95605585056877_1.14717578412183 chr5 143328728 143329961 + 1.14717578412183 NA promoter-TSS (NR_027874) promoter-TSS (NR_027874) 36 NR_027874 67672 Mm.30983 NR_027874 ENSMUSG00000089889 0610040B10Rik - RIKEN cDNA 0610040B10 gene ncRNA common_peak1_40_295_-0.248010100563524_8.08544831534719_1.14667834145632 chr6 58595106 58595880 + 1.14667834145632 NA Intergenic Intergenic -1179 NM_011920 26357 Mm.333096 NM_011920 ENSMUSG00000029802 Abcg2 ABC15|ABCP|AI428558|BCRP|Bcrp1|MXR|MXR1 ATP-binding cassette, sub-family G (WHITE), member 2 protein-coding common_peak2_37_271_-0.260486326667093_7.95721967791679_1.14630255179024 chr18 36453883 36454819 + 1.14630255179024 NA intron (NM_026027, intron 1 of 3) intron (NM_026027, intron 1 of 3) 144 NM_026027 67199 Mm.30184 NM_026027 ENSMUSG00000024346 Pfdn1 2700086I23Rik|AA408327|AU044714 prefoldin 1 protein-coding common_peak2_140_1042_0.120742161059537_10.0868945230495_1.14592071508584 chr3 137980021 137982253 + 1.14592071508584 NA intron (NM_011932, intron 1 of 8) intron (NM_011932, intron 1 of 8) 412 NM_011932 26377 Mm.254835 NM_011932 ENSMUSG00000028159 Dapp1 Bam32 dual adaptor for phosphotyrosine and 3-phosphoinositides 1 protein-coding common_peak1_128_930_0.127224328848438_9.92624952198301_1.14547522152427 chr13 59674857 59676141 + 1.14547522152427 NA intron (NM_027307, intron 1 of 10) intron (NM_027307, intron 1 of 10) 285 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding common_peak1_34_167_0.289128291744773_7.53688156865115_1.14540694467523 chr5 123979302 123979989 + 1.14540694467523 NA intron (NM_145070, intron 1 of 31) intron (NM_145070, intron 1 of 31) 6017 NM_145070 29816 Mm.149954 NM_145070 ENSMUSG00000000915 Hip1r AA410023|mKIAA0655 huntingtin interacting protein 1 related protein-coding common_peak1_21_148_-0.35937077776821_7.03948313157806_1.14537278609584 chr17 71287630 71288102 + 1.14537278609584 NA intron (NM_145158, intron 2 of 7) intron (NM_145158, intron 2 of 7) 23099 NM_145158 246707 Mm.23462 NM_145158 ENSMUSG00000024053 Emilin2 FOAP-10 elastin microfibril interfacer 2 protein-coding common_peak1_21_148_-0.35937077776821_7.03948313157806_1.14537278609584-3 chr8 22813594 22814016 + 1.14537278609584 NA Intergenic Intergenic -8151 NM_001122820 64933 Mm.390023 NM_029505 ENSMUSG00000031539 Ap3m2 5830445E16Rik|AP-3B adaptor-related protein complex 3, mu 2 subunit protein-coding common_peak1_21_148_-0.35937077776821_7.03948313157806_1.14537278609584-2 chr7 122312729 122313232 + 1.14537278609584 NA intron (NM_001316672, intron 2 of 16) intron (NM_001316672, intron 2 of 16) 23855 NM_008855 18751 Mm.207496 NM_008855 ENSMUSG00000052889 Prkcb PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2 protein kinase C, beta protein-coding common_peak1_26_185_-0.316951244268436_7.38068318897381_1.14525238035742-2 chr6 3345155 3345649 + 1.14525238035742 NA Intergenic Intergenic 54169 NM_010156 209086 Mm.196013 NM_010156 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like protein-coding common_peak1_26_185_-0.316951244268436_7.38068318897381_1.14525238035742 chr10 88356905 88357614 + 1.14525238035742 NA promoter-TSS (NM_027878) promoter-TSS (NM_027878) -184 NM_027878 71712 Mm.35450 NM_027878 ENSMUSG00000020057 Dram1 1200002N14Rik|Dram DNA-damage regulated autophagy modulator 1 protein-coding unique_peak2_22_94_0.368605195762562_6.75415820621223_1.14512375503457 chr11 62538648 62539444 + 1.14512375503457 NA exon (NM_028448, exon 1 of 5) exon (NM_028448, exon 1 of 5) 215 NM_028448 73139 Mm.390409 NM_028448 ENSMUSG00000018509 Cenpv 3110013H01Rik|AA671303|Prr6 centromere protein V protein-coding common_peak1_22_94_0.368605195762562_6.75415820621223_1.14512375503457-3 chr18 79068278 79068872 + 1.14512375503457 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 40816 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_22_94_0.368605195762562_6.75415820621223_1.14512375503457-2 chr14 27347890 27348424 + 1.14512375503457 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) 12120 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_22_94_0.368605195762562_6.75415820621223_1.14512375503457 chr1 52577056 52577586 + 1.14512375503457 NA Intergenic Intergenic -53384 NR_024590 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding common_peak1_22_94_0.368605195762562_6.75415820621223_1.14512375503457-4 chr19 38819071 38819693 + 1.14512375503457 NA promoter-TSS (NM_021315) promoter-TSS (NM_021315) -145 NM_021315 57753 Mm.86482 NM_021315 ENSMUSG00000024999 Noc3l AF233884|Fad24 NOC3 like DNA replication regulator protein-coding unique_peak2_22_94_0.368605195762562_6.75415820621223_1.14512375503457-2 chr2 164785578 164786529 + 1.14512375503457 NA promoter-TSS (NM_133924) promoter-TSS (NM_133924) 32 NM_133924 101113 Mm.295647 NM_133924 ENSMUSG00000050373 Snx21 5730407K14Rik|AI481716 sorting nexin family member 21 protein-coding common_peak1_22_94_0.368605195762562_6.75415820621223_1.14512375503457-5 chr8 119574298 119574873 + 1.14512375503457 NA promoter-TSS (NM_026648) promoter-TSS (NM_026648) 615 NM_175185 72552 Mm.36756 NM_175185 ENSMUSG00000034189 Hsdl1 2700067E09Rik hydroxysteroid dehydrogenase like 1 protein-coding common_peak1_99_822_-0.145508805912531_9.61199421746536_1.14500867697975 chr11 43425849 43427069 + 1.14500867697975 NA promoter-TSS (NM_013917) promoter-TSS (NM_013917) -211 NM_001131054 30939 Mm.6856 NM_013917 ENSMUSG00000020415 Pttg1 AW555095|C87862|Pttg|Pttg3 pituitary tumor-transforming gene 1 protein-coding common_peak1_58_447_-0.201828517015779_8.70644066354971_1.14458760636799 chr10 81405040 81406369 + 1.14458760636799 NA intron (NM_026756, intron 7 of 8) intron (NM_026756, intron 7 of 8) 10593 NR_106141 102465778 NR_106141 ENSMUSG00000105379 Mir1191b mmu-mir-1191b microRNA 1191b ncRNA common_peak1_58_447_-0.201828517015779_8.70644066354971_1.14458760636799-2 chr16 59471493 59472485 + 1.14458760636799 NA intron (NM_025910, intron 1 of 9) CpG 214 NM_025910 67014 Mm.289150 NM_025910 ENSMUSG00000022724 Mina 1810047J07Rik|2410057H13Rik|3830408E23Rik|AI449204 myc induced nuclear antigen protein-coding common_peak1_245_2379_-0.08455576579024_11.1744679753002_1.14437813211785 chr9 96718953 96720438 + 1.14437813211785 NA intron (NM_175537, intron 1 of 2) CpG 11980 NM_175537 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak2_51_285_0.222162219048899_8.27095244630284_1.14419058570329 chr13 55592959 55593913 + 1.14419058570329 NA intron (NM_026211, intron 1 of 4) CpG 301 NM_026211 67511 Mm.45233 NM_026211 ENSMUSG00000058569 Tmed9 2400003B06Rik transmembrane p24 trafficking protein 9 protein-coding common_peak1_51_285_0.222162219048899_8.27095244630284_1.14419058570329 chr4 137048020 137048734 + 1.14419058570329 NA intron (NM_198248, intron 1 of 18) CpG 318 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|mKIAA0478 zinc finger and BTB domain containing 40 protein-coding common_peak2_51_285_0.222162219048899_8.27095244630284_1.14419058570329-2 chr2 165692570 165694109 + 1.14419058570329 NA intron (NM_001271962, intron 5 of 15) intron (NM_001271962, intron 5 of 15) 38041 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding common_peak1_48_361_-0.222969650172521_8.38836106199695_1.14357102936856 chr17 33556912 33557376 + 1.14357102936856 NA intron (NM_053214, intron 1 of 27) intron (NM_053214, intron 1 of 27) 1437 NM_053214 17916 Mm.42019 NM_053214 ENSMUSG00000024300 Myo1f C330006B10Rik myosin IF protein-coding common_peak2_97_803_-0.147563143081888_9.57727011963798_1.14341765750253 chr19 5023117 5024605 + 1.14341765750253 NA promoter-TSS (NM_007854) promoter-TSS (NM_007854) -145 NM_007854 13340 Mm.4930 NM_007854 ENSMUSG00000024891 Slc29a2 Der12|Ent2|Hnp36 solute carrier family 29 (nucleoside transporters), member 2 protein-coding common_peak2_43_228_0.247206265783364_7.96280692098863_1.14291267305077 chr11 67580162 67581523 + 1.14291267305077 NA intron (NM_008088, intron 1 of 13) intron (NM_008088, intron 1 of 13) -5658 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_230_1953_0.0886413049579655_10.9765354044474_1.14287311697061 chr3 33799107 33800926 + 1.14287311697061 NA promoter-TSS (NM_001290500) promoter-TSS (NM_001290500) -167 NM_027619 67120 Mm.275710 NM_025978 ENSMUSG00000027677 Ttc14 2700016E08Rik|4930434D01Rik|4931403I22Rik|4933402I15Rik|AI662468|AU014779|AW561908|cI-44|mKIAA1980 tetratricopeptide repeat domain 14 protein-coding common_peak1_30_216_-0.294869027710173_7.61411671858939_1.14282438870679 chr19 5460549 5461043 + 1.14282438870679 NA intron (NM_021438, intron 1 of 9) intron (NM_021438, intron 1 of 9) 189 NM_021438 58249 Mm.329656 NM_021438 ENSMUSG00000024911 Fibp 2010004G08Rik|2010005N21Rik|3010027N18Rik fibroblast growth factor (acidic) intracellular binding protein protein-coding common_peak1_30_216_-0.294869027710173_7.61411671858939_1.14282438870679-2 chr19 37110803 37111189 + 1.14282438870679 NA intron (NM_001290826, intron 4 of 10) Lx7|LINE|L1 -62847 NR_045329 319931 Mm.446730 NR_045329 ENSMUSG00000097591 A330032B11Rik - RIKEN cDNA A330032B11 gene ncRNA unique_peak2_30_216_-0.294869027710173_7.61411671858939_1.14282438870679 chr14 106022272 106023551 + 1.14282438870679 NA Intergenic Lx9|LINE|L1 -83287 NM_198601 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_138_1023_0.121984780792602_10.0609923903963_1.1427427457241 chr10 36974078 36975307 + 1.1427427457241 NA 5' UTR (NM_008229, exon 1 of 14) 5' UTR (NM_008229, exon 1 of 14) 148 NM_008229 15182 Mm.19806 NM_008229 ENSMUSG00000019777 Hdac2 D10Wsu179e|YAF1|Yy1bp|mRPD3 histone deacetylase 2 protein-coding common_peak1_40_207_0.261003546924334_7.83094149160326_1.14223869987721 chr4 155066985 155067813 + 1.14223869987721 NA intron (NM_001042407, intron 1 of 5) intron (NM_001042407, intron 1 of 5) 369 NM_001042407 668173 Mm.133114 NM_001042407 ENSMUSG00000029047 Pex10 AV128229|Gm142 peroxisomal biogenesis factor 10 protein-coding common_peak2_196_1826_-0.0961543020021889_10.7871837676264_1.14206861776961 chr16 18875752 18878458 + 1.14206861776961 NA promoter-TSS (NM_010922) promoter-TSS (NM_010922) 355 NM_010435 15260 Mm.15694 NM_010435 ENSMUSG00000022702 Hira AA138857|D16Ertd95e|Gm15797|N28177|OTTMUSG00000026264|Tuple1 histone cell cycle regulator protein-coding common_peak1_430_4281_0.0604866227627383_12.0943123917669_1.14167479390584 chr5 137629093 137632759 + 1.14167479390584 NA intron (NR_033148, intron 1 of 21) intron (NR_033148, intron 1 of 21) 1803 NR_033148 100316903 Mm.200763 NR_033148 Gm20605 Lrch4-sap25 predicted gene 20605 ncRNA common_peak1_67_406_0.187875899080636_8.76282293380656_1.14128905493488 chr6 124813462 124814412 + 1.14128905493488 NA intron (NM_009415, intron 1 of 6) intron (NM_009415, intron 1 of 6) 359 NM_009415 21991 Mm.4222 NM_009415 ENSMUSG00000023456 Tpi1 AI255506|Tpi|Tpi-1 triosephosphate isomerase 1 protein-coding common_peak2_60_464_-0.196567454948422_8.76280317852118_1.14128905493488 chr14 103348658 103350524 + 1.14128905493488 NA Intergenic Intergenic -2791 NM_207215 105689 Mm.6478 NM_207215 ENSMUSG00000033004 Mycbp2 AU023734|AW107953|AW546647|C130061D10Rik|Pam|Phr1|R75243 MYC binding protein 2 protein-coding common_peak1_252_2459_-0.0826003830052393_11.223142408724_1.1410335444817 chr19 53406191 53409383 + 1.1410335444817 NA Intergenic B3|SINE|B2 -17214 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak1_73_579_-0.173513127617168_9.09315252620635_1.14090980712755 chr2 78979631 78981044 + 1.14090980712755 NA Intergenic L1M5|LINE|L1 111290 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_146_1292_-0.115495806746287_10.2787586564371_1.14013803130901 chr1 133820598 133822572 + 1.14013803130901 NA Intergenic Intergenic -67838 NM_213616 381290 Mm.188617 NM_213616 ENSMUSG00000026463 Atp2b4 Pmca4 ATPase, Ca++ transporting, plasma membrane 4 protein-coding common_peak1_146_1292_-0.115495806746287_10.2787586564371_1.14013803130901-2 chr11 4235753 4237782 + 1.14013803130901 NA promoter-TSS (NM_001013365) promoter-TSS (NM_001013365) -18 NM_001013365 18413 Mm.131422 NM_001013365 ENSMUSG00000058755 Osm OncoM oncostatin M protein-coding unique_peak2_75_597_-0.170412848428501_9.13879524998385_1.140067080947 chr10 122725306 122728859 + 1.140067080947 NA intron (NM_176919, intron 1 of 8) RSINE1|SINE|B4 47767 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak1_53_299_0.22000118753007_8.33881928426092_1.13962269953772 chr13 63410423 63411481 + 1.13962269953772 NA intron (NM_007985, intron 1 of 14) intron (NM_007985, intron 1 of 14) 20793 NM_007985 14088 Mm.126106 NM_007985 ENSMUSG00000021461 Fancc Facc Fanconi anemia, complementation group C protein-coding common_peak2_169_1323_0.10756675223163_10.424470782923_1.1392454919154 chr7 128177999 128182350 + 1.1392454919154 NA intron (NM_001029872, intron 5 of 30) intron (NM_001029872, intron 5 of 30) 6228 NM_001029872 381924 Mm.334257 NM_001029872 ENSMUSG00000070369 Itgad Cd11d integrin, alpha D protein-coding common_peak1_48_263_0.23248211755223_8.16063517813457_1.13910606524171-2 chr17 46110528 46111524 + 1.13910606524171 NA promoter-TSS (NM_026768) promoter-TSS (NM_026768) 22 NM_026768 68565 Mm.287443 NM_026768 ENSMUSG00000023967 Mrps18a 1110004O20Rik|C79712 mitochondrial ribosomal protein S18A protein-coding common_peak2_48_263_0.23248211755223_8.16063517813457_1.13910606524171 chr3 9454527 9456049 + 1.13910606524171 NA intron (NM_133218, intron 4 of 8) intron (NM_133218, intron 4 of 8) 52210 NR_015499 320088 Mm.212908 NR_015499 ENSMUSG00000097365 C030034L19Rik A130044O20Rik RIKEN cDNA C030034L19 gene ncRNA common_peak1_48_263_0.23248211755223_8.16063517813457_1.13910606524171 chr13 106946901 106947718 + 1.13910606524171 NA intron (NM_025447, intron 1 of 11) CpG 180 NM_025447 66254 Mm.9563 NM_025447 ENSMUSG00000021692 Dimt1 1500031M22Rik|AV111347|Dimt1l DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) protein-coding common_peak2_87_708_-0.156619452172853_9.39133209115309_1.13899900807058 chr7 78782549 78783864 + 1.13899900807058 NA promoter-TSS (NM_023331) promoter-TSS (NM_023331) 75 NM_026498 67994 Mm.297033 NM_026498 ENSMUSG00000030611 Mrps11 0710005I03Rik|C79873 mitochondrial ribosomal protein S11 protein-coding common_peak2_95_636_0.151850528208508_9.39107482636055_1.13899900807058 chr2 103484310 103485992 + 1.13899900807058 NA promoter-TSS (NM_009804) promoter-TSS (NM_009804) 2 NM_009804 12359 Mm.4215 NM_009804 ENSMUSG00000027187 Cat 2210418N07|Cas-1|Cas1|Cs-1 catalase protein-coding unique_peak2_26_117_0.339564517477753_7.05242530810072_1.1389933161489 chr6 92183716 92184522 + 1.1389933161489 NA promoter-TSS (NM_025578) promoter-TSS (NM_025578) -96 NM_025578 64658 Mm.87062 NM_025578 ENSMUSG00000014551 Mrps25 2810429N01Rik|Rpms25 mitochondrial ribosomal protein S25 protein-coding common_peak1_26_117_0.339564517477753_7.05242530810072_1.1389933161489 chr5 142912049 142912629 + 1.1389933161489 NA Intergenic B1_Mus2|SINE|Alu -5585 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak2_45_336_-0.231531665901993_8.28083894823086_1.138765791305 chr7 125587861 125589405 + 1.138765791305 NA Intergenic ORR1A2|LTR|ERVL-MaLR -14796 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak2_45_336_-0.231531665901993_8.28083894823086_1.138765791305-2 chr9 106247276 106248428 + 1.138765791305 NA promoter-TSS (NM_001291835) promoter-TSS (NM_001291835) 102 NM_020559 11655 Mm.290578 NM_020559 ENSMUSG00000032786 Alas1 ALAS|ALAS-N|Alas-1|Alas-h aminolevulinic acid synthase 1 protein-coding common_peak2_55_420_-0.204499361862114_8.61542674213534_1.13849354059761 chr13 117007696 117009171 + 1.13849354059761 NA intron (NM_001081009, intron 3 of 26) intron (NM_001081009, intron 3 of 26) 17083 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding common_peak2_21_88_0.384064311727554_6.66776558683017_1.13819685577021 chr6 53068114 53068836 + 1.13819685577021 NA exon (NM_173406, exon 1 of 5) exon (NM_173406, exon 1 of 5) 149 NM_173406 231986 Mm.386865 NM_173406 ENSMUSG00000063568 Jazf1 AI591476|C820002C15|Jaz1|Tip27 JAZF zinc finger 1 protein-coding unique_peak2_21_88_0.384064311727554_6.66776558683017_1.13819685577021 chr18 3270103 3270925 + 1.13819685577021 NA intron (NR_073193, intron 7 of 7) intron (NR_073193, intron 7 of 7) 10618 NM_001311066 12916 Mm.5244 NM_013498 ENSMUSG00000063889 Crem ICER|ICERI cAMP responsive element modulator protein-coding common_peak1_21_88_0.384064311727554_6.66776558683017_1.13819685577021-2 chr3 86104015 86104413 + 1.13819685577021 NA exon (NM_001082414, exon 5 of 15) exon (NM_001082414, exon 5 of 15) 19780 NM_001082414 27059 Mm.2454 NM_012059 ENSMUSG00000028082 Sh3d19 AW011754|Kryn SH3 domain protein D19 protein-coding common_peak1_21_88_0.384064311727554_6.66776558683017_1.13819685577021 chr14 47418356 47418902 + 1.13819685577021 NA promoter-TSS (NM_144553) promoter-TSS (NM_144553) -222 NM_144553 218977 Mm.240543 NM_144553 ENSMUSG00000037544 Dlgap5 C77459|C86398|Dap-5|Dlg7|Hurp|mKIAA0008 discs, large (Drosophila) homolog-associated protein 5 protein-coding common_peak2_21_88_0.384064311727554_6.66776558683017_1.13819685577021-2 chr8 14089850 14090505 + 1.13819685577021 NA intron (NM_001034862, intron 1 of 5) intron (NM_001034862, intron 1 of 5) 150 NM_001034862 234086 Mm.268896 NM_001034862 ENSMUSG00000051978 Erich1 - glutamate rich 1 protein-coding common_peak2_259_2540_-0.0810415173477459_11.2706599013795_1.13791579989568 chr9 96718368 96721224 + 1.13791579989568 NA intron (NM_175537, intron 1 of 2) CpG 11879 NM_175537 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak1_154_1375_-0.111476963089471_10.3705262731574_1.13744222996963-2 chr13 107021245 107023042 + 1.13744222996963 NA promoter-TSS (NR_015471) promoter-TSS (NR_015471) -29 NM_008442 16563 Mm.355686 NM_008442 ENSMUSG00000021693 Kif2a C530030B14Rik|Kif2|Kns2|M-kinesin kinesin family member 2A protein-coding common_peak1_154_1375_-0.111476963089471_10.3705262731574_1.13744222996963 chr10 34417448 34418990 + 1.13744222996963 NA intron (NM_176968, intron 1 of 11) CpG 309 NM_176968 319638 Mm.73467 NM_176968 ENSMUSG00000039480 Nt5dc1 6030401B09Rik|AW987726|Nt5c2l1 5'-nucleotidase domain containing 1 protein-coding common_peak2_60_352_0.200995077775792_8.56402191215908_1.13709601650789 chr1 80737128 80739384 + 1.13709601650789 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 20297 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding unique_peak2_30_142_0.306810867955917_7.31327677075635_1.13658376566699-3 chr8 125558183 125559428 + 1.13658376566699 NA Intergenic Intergenic -25833 NR_015535 75930 Mm.195663 NR_015535 ENSMUSG00000110629 4930567H12Rik 4930579P07Rik RIKEN cDNA 4930567H12 gene ncRNA common_peak2_30_142_0.306810867955917_7.31327677075635_1.13658376566699 chr9 88530330 88531102 + 1.13658376566699 NA Intergenic Intergenic -7819 NR_040721 72655 Mm.21798 NR_040721 ENSMUSG00000097195 Snhg5 2810026P18Rik|4933428I09Rik|mU50HG-b small nucleolar RNA host gene 5 ncRNA unique_peak2_30_142_0.306810867955917_7.31327677075635_1.13658376566699-2 chr5 149526326 149527270 + 1.13658376566699 NA intron (NR_045423, intron 1 of 4) AmnSINE1|SINE|Deu -1881 NM_029440 381693 Mm.136919 NM_029440 ENSMUSG00000029658 Wdr95 4930434E21Rik WD40 repeat domain 95 protein-coding unique_peak2_30_142_0.306810867955917_7.31327677075635_1.13658376566699 chr12 12289480 12290525 + 1.13658376566699 NA intron (NM_029758, intron 2 of 12) intron (NM_029758, intron 2 of 12) 27863 NM_001146119 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding common_peak1_102_851_-0.143161736449098_9.66312875200129_1.13636677150347 chr2 166152250 166153852 + 1.13636677150347 NA intron (NM_028072, intron 1 of 20) intron (NM_028072, intron 1 of 20) 2234 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak1_42_311_-0.239675048608298_8.1655646945581_1.13618448689746 chr2 130563002 130563666 + 1.13618448689746 NA promoter-TSS (NM_207207) promoter-TSS (NM_207207) 415 NR_040348 321014 Mm.442588 NR_040348 ENSMUSG00000060029 4930473A02Rik - RIKEN cDNA 4930473A02 gene ncRNA common_peak1_42_311_-0.239675048608298_8.1655646945581_1.13618448689746-2 chr6 41551312 41552426 + 1.13618448689746 NA Intergenic Intergenic 30093 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak1_229_2195_-0.0874836368470149_11.0569205205817_1.13591395135741 chr1 84838008 84840117 + 1.13591395135741 NA promoter-TSS (NM_025386) promoter-TSS (NM_025386) 242 NM_133975 14897 Mm.209265 NM_133975 ENSMUSG00000026219 Trip12 1110036I07Rik|6720416K24Rik|AA410158|Gtl6|TRIP-12 thyroid hormone receptor interactor 12 protein-coding common_peak2_194_1576_0.0980820916956695_10.6720079906383_1.13572049070763 chr11 3647780 3649978 + 1.13572049070763 NA promoter-TSS (NM_001159288) promoter-TSS (NM_001159288) -65 NR_002321 544752 Mm.390314 NR_002321 ENSMUSG00000056579 Tug1 AI316828 taurine upregulated gene 1 ncRNA common_peak2_111_938_-0.135191975263137_9.80738536002221_1.13564352833797 chr9 13246820 13248111 + 1.13564352833797 NA intron (NM_025534, intron 1 of 8) intron (NM_025534, intron 1 of 8) 486 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding common_peak2_100_831_-0.143591524535635_9.62864395587328_1.13541020162992 chr5 28071266 28072593 + 1.13541020162992 NA intron (NM_153526, intron 1 of 4) intron (NM_153526, intron 1 of 4) 517 NM_153526 231070 Mm.30221 NM_153526 ENSMUSG00000045294 Insig1 1810013C12Rik|Insig-1 insulin induced gene 1 protein-coding common_peak1_100_831_-0.143591524535635_9.62864395587328_1.13541020162992 chr7 30728941 30730078 + 1.13541020162992 NA promoter-TSS (NM_027215) promoter-TSS (NM_027215) 25 NM_027215 69804 Mm.27499 NM_027215 ENSMUSG00000006315 Tmem147 2010004E11Rik|5033425B17Rik|Nifie14 transmembrane protein 147 protein-coding common_peak2_64_499_-0.188869764329191_8.87134940249749_1.13500018127905 chr13 118386326 118387906 + 1.13500018127905 NA exon (NM_021556, exon 1 of 5) exon (NM_021556, exon 1 of 5) 136 NM_021556 59054 Mm.143810 NM_021556 ENSMUSG00000021731 Mrps30 2610020A16Rik|AA968347|PAP|Pdcd9 mitochondrial ribosomal protein S30 protein-coding unique_peak2_20_141_-0.372272475706184_6.96361088165159_1.13454506739602 chr14 75022027 75023375 + 1.13454506739602 NA intron (NM_198642, intron 1 of 13) intron (NM_198642, intron 1 of 13) 6674 NM_198642 271221 Mm.320280 NM_198642 ENSMUSG00000034959 Rubcnl 5031414D18Rik|Gm744|Gm911|Kiaa0226l RUN and cysteine rich domain containing beclin 1 interacting protein like protein-coding common_peak1_20_141_-0.372272475706184_6.96361088165159_1.13454506739602 chr6 129594894 129595368 + 1.13454506739602 NA intron (NM_010654, intron 3 of 5) intron (NM_010654, intron 3 of 5) 3320 NM_010654 16643 Mm.391515 NM_010654 ENSMUSG00000030165 Klrd1 CD94 killer cell lectin-like receptor, subfamily D, member 1 protein-coding unique_peak2_20_141_-0.372272475706184_6.96361088165159_1.13454506739602-2 chr14 120831889 120832609 + 1.13454506739602 NA Intergenic Intergenic -78945 NM_023579 70572 Mm.221452 NM_023579 ENSMUSG00000030662 Ipo5 1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5 importin 5 protein-coding common_peak1_113_794_0.136299980564813_9.70296104045412_1.13452858149822 chr1 7088036 7088805 + 1.13452858149822 NA promoter-TSS (NM_183028) promoter-TSS (NM_183028) -500 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding common_peak2_186_1494_0.100987905016558_10.5964237215937_1.13424254493213 chr19 7339735 7342758 + 1.13424254493213 NA 5' UTR (NM_007928, exon 1 of 18) 5' UTR (NM_007928, exon 1 of 18) 614 NM_001080389 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak2_57_437_-0.199511433902249_8.67503134265005_1.13416773414369 chr7 45128905 45130053 + 1.13416773414369 NA promoter-TSS (NM_009438) promoter-TSS (NM_009438) -734 NM_009438 22121 Mm.180458 NM_009438 ENSMUSG00000074129 Rpl13a 1810026N22Rik|Tstap198-7|tum-antigen ribosomal protein L13A protein-coding common_peak1_57_437_-0.199511433902249_8.67503134265005_1.13416773414369 chr16 24215977 24217015 + 1.13416773414369 NA Intergenic Intergenic -176854 NM_178665 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_223_1879_0.0898847370119942_10.921459315071_1.13416203633332 chr5 33935263 33937320 + 1.13416203633332 NA promoter-TSS (NM_011914) promoter-TSS (NM_011914) -33 NM_011914 24116 Mm.332320 NM_011914 ENSMUSG00000029111 Nelfa Whsc2|Whsc2h negative elongation factor complex member A, Whsc2 protein-coding common_peak2_260_2552_-0.0810454755879828_11.2774550846131_1.13387020091652 chr11 115126188 115130110 + 1.13387020091652 NA intron (NM_145634, intron 1 of 6) intron (NM_145634, intron 1 of 6) 5843 NM_001169153 246746 Mm.277387 NM_145634 ENSMUSG00000047798 Cd300lf CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3 CD300 molecule like family member F protein-coding common_peak2_36_263_-0.264610468147044_7.91208888528493_1.13340538207838 chr1 191317383 191318413 + 1.13340538207838 NA intron (NM_025424, intron 1 of 3) CpG 220 NM_025424 66208 Mm.46444 NM_025424 ENSMUSG00000037499 Nenf 1110060M21Rik|SCIRP10|Spuf neuron derived neurotrophic factor protein-coding common_peak2_45_242_0.240260611674084_8.04494280944282_1.13327012521706 chr6 3424344 3425844 + 1.13327012521706 NA Intergenic Intergenic -25523 NM_010156 209086 Mm.196013 NM_010156 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like protein-coding common_peak1_39_287_-0.25217846262518_8.04383577012972_1.13327012521706 chr8 72131704 72132684 + 1.13327012521706 NA Intergenic Intergenic -3098 NM_001001491 326618 Mm.295124 NM_001001491 ENSMUSG00000031799 Tpm4 2610528G24Rik|Tpm4.2|Tpm4.2cy tropomyosin 4 protein-coding common_peak1_45_242_0.240260611674084_8.04494280944282_1.13327012521706 chr3 152762900 152763874 + 1.13327012521706 NA intron (NM_025662, intron 9 of 10) Lx8|LINE|L1 49287 NM_025662 329777 Mm.331447 NM_025662 ENSMUSG00000039047 Pigk 3000001O05Rik phosphatidylinositol glycan anchor biosynthesis, class K protein-coding common_peak1_45_242_0.240260611674084_8.04494280944282_1.13327012521706-2 chr6 30354031 30354788 + 1.13327012521706 NA Intergenic B1_Mur1|SINE|Alu 36601 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding common_peak1_96_793_-0.147656833779548_9.55916678025318_1.13200519226236 chr17 52165335 52166968 + 1.13200519226236 NA Intergenic Intergenic 283424 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA common_peak1_29_208_-0.298702699483179_7.55800778233929_1.13195832473857 chr7 44374060 44374690 + 1.13195832473857 NA exon (NM_027049, exon 2 of 6) exon (NM_027049, exon 2 of 6) 655 NM_027049 69349 Mm.358922 NM_027049 ENSMUSG00000008028 1700008O03Rik - RIKEN cDNA 1700008O03 gene protein-coding common_peak1_47_352_-0.223136593992729_8.35195607627482_1.13191407319837 chr2 150293820 150294713 + 1.13191407319837 NA Intergenic RMER2|LTR|ERV1 36749 NM_001142410 100216455 Mm.484816 NM_001142410 ENSMUSG00000079008 Gm14124 EG640962|ENSMUSG00000074735|Gm10749|OTTMUSG00000015734 predicted gene 14124 protein-coding common_peak2_47_352_-0.223136593992729_8.35195607627482_1.13191407319837 chr10 21244657 21246080 + 1.13191407319837 NA Intergenic Intergenic -50611 NM_001042593 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak1_233_2240_-0.0862366565628925_11.0868086052289_1.13166130402211 chr11 50377570 50379212 + 1.13166130402211 NA exon (NM_021510, exon 2 of 14) exon (NM_021510, exon 2 of 14) 672 NM_021510 59013 Mm.21740 NM_021510 ENSMUSG00000007850 Hnrnph1 AI642080|E430005G16Rik|Hnrnph|Hnrph1 heterogeneous nuclear ribonucleoprotein H1 protein-coding common_peak1_52_394_-0.209967077621354_8.52072530425379_1.13163721752496 chr8 116638227 116638918 + 1.13163721752496 NA intron (NM_029441, intron 1 of 6) L1M5|LINE|L1 94419 NM_029441 75796 Mm.159575 NM_029441 ENSMUSG00000031758 Cdyl2 1700029M19Rik|4930453I21Rik|Gm20194 chromodomain protein, Y chromosome-like 2 protein-coding common_peak1_19_133_-0.374954962826996_6.87861170904427_1.13137866467349-2 chr6 130126510 130126950 + 1.13137866467349 NA intron (NM_053151, intron 2 of 7) intron (NM_053151, intron 2 of 7) 3105 NM_010650 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding common_peak1_19_133_-0.374954962826996_6.87861170904427_1.13137866467349 chr1 43558941 43559474 + 1.13137866467349 NA intron (NM_010879, intron 4 of 4) Lx7|LINE|L1 113456 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_25_178_-0.328394532623324_7.31961851095259_1.1313569703249 chr9 124124753 124125344 + 1.1313569703249 NA exon (NM_009917, exon 2 of 2) exon (NM_009917, exon 2 of 2) 3505 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak2_68_534_-0.180799761041715_8.97299520076765_1.13129163793952 chr11 5485317 5486461 + 1.13129163793952 NA Intergenic Intergenic -34752 NM_013842 22433 Mm.469937 NM_013842 ENSMUSG00000020484 Xbp1 D11Ertd39e|TREB-5|TREB5|XBP-1 X-box binding protein 1 protein-coding common_peak1_68_534_-0.180799761041715_8.97299520076765_1.13129163793952 chr10 22299575 22300577 + 1.13129163793952 NA intron (NM_009018, intron 5 of 5) intron (NM_009018, intron 5 of 5) -6644 NR_015465 606736 Mm.387042 NR_015465 ENSMUSG00000097352 C920009B18Rik - RIKEN cDNA C920009B18 gene ncRNA common_peak1_107_899_-0.13834900200473_9.74460669021467_1.13110103074065 chr15 6524872 6526206 + 1.13110103074065 NA Intergenic ORR1E|LTR|ERVL-MaLR -54308 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak2_107_899_-0.13834900200473_9.74460669021467_1.13110103074065 chr7 127587761 127589533 + 1.13110103074065 NA promoter-TSS (NM_001033040) promoter-TSS (NM_001033040) -51 NM_172281 233900 Mm.41122 NM_172281 ENSMUSG00000030816 Rnf40 AI848422|mKIAA0661 ring finger protein 40 protein-coding common_peak1_118_839_0.132826852573521_9.78065894395288_1.13093155794497 chr1 21218251 21219496 + 1.13093155794497 NA 5' UTR (NM_029398, exon 1 of 5) 5' UTR (NM_029398, exon 1 of 5) 298 NM_029398 75712 Mm.304763 NM_029398 ENSMUSG00000025933 Tmem14a 5730496E24Rik|C85783|PTD011 transmembrane protein 14A protein-coding common_peak2_94_774_-0.149582709886388_9.52326114521841_1.13061692430304 chr17 80174007 80176395 + 1.13061692430304 NA intron (NM_176963, intron 4 of 6) intron (NM_176963, intron 4 of 6) 32104 NM_001195486 225027 Mm.292016 NM_146083 ENSMUSG00000024097 Srsf7 35kDa|9430065L19Rik|9G8|NX-96|Sfrs7 serine/arginine-rich splicing factor 7 protein-coding common_peak1_94_774_-0.149582709886388_9.52326114521841_1.13061692430304 chr7 98701875 98703022 + 1.13061692430304 NA promoter-TSS (NM_028410) promoter-TSS (NM_028410) -915 NM_028410 72981 Mm.4428 NM_028410 ENSMUSG00000030753 Thap12 2900052B10Rik|Dap4|Prkrir|Rpkrir THAP domain containing 12 protein-coding common_peak2_145_1281_-0.115249209046755_10.2665559420954_1.13010342975402 chr10 81558837 81561677 + 1.13010342975402 NA intron (NR_074087, intron 1 of 6) intron (NR_074087, intron 1 of 6) 813 NM_001276288 14797 Mm.180013 NM_010347 ENSMUSG00000054452 Aes AL024115|Esp1|Grg|Grg-5|Grg5|Tle5 amino-terminal enhancer of split protein-coding common_peak2_42_221_0.251311303903845_7.92007151830203_1.12996384864177 chr17 28966468 28967875 + 1.12996384864177 NA 3' UTR (NM_025888, exon 8 of 8) 3' UTR (NM_025888, exon 8 of 8) 13955 NM_025888 66989 Mm.435 NM_025888 ENSMUSG00000005936 Kctd20 2410004N11Rik|AI451943|AW541186|D17Ertd562e potassium channel tetramerisation domain containing 20 protein-coding common_peak2_98_662_0.148589403701576_9.44715976196338_1.12973783269807 chr2 32036648 32038470 + 1.12973783269807 NA intron (NM_172268, intron 29 of 35) Lx8|LINE|L1 -13387 NR_106135 102466844 NR_106135 ENSMUSG00000099075 Mir7674 Gm27563|mmu-mir-7674 microRNA 7674 ncRNA common_peak1_207_1947_-0.0925197838823415_10.8815180701412_1.12971239580149 chr17 25183818 25185288 + 1.12971239580149 NA promoter-TSS (NM_183150) promoter-TSS (NM_183150) -8 NM_183150 214489 Mm.274433 NM_183150 ENSMUSG00000067722 BC003965 Ccsmst1 cDNA sequence BC003965 protein-coding common_peak2_267_2357_0.0804203195426734_11.2435581627511_1.12925306473214 chr14 14011750 14014126 + 1.12925306473214 NA intron (NM_139227, intron 1 of 11) CpG 447 NM_139227 246103 Mm.133625 NM_139227 ENSMUSG00000021738 Atxn7 A430107N12Rik|AI627028|Sca7|ataxin-7 ataxin 7 protein-coding common_peak1_90_736_-0.153175766375023_9.44893292590756_1.12855204027042 chr17 24720072 24721069 + 1.12855204027042 NA promoter-TSS (NR_027900) promoter-TSS (NR_027900) -219 NR_002897 104366 Mm.157452 NR_002897 ENSMUSG00000077709 Snora64 MBI-29|Rnu64 small nucleolar RNA, H/ACA box 64 snoRNA common_peak2_135_996_0.121923500135045_10.0224114444657_1.12781905225318 chr2 172439191 172441436 + 1.12781905225318 NA promoter-TSS (NM_025542) promoter-TSS (NM_025542) -265 NM_025542 66404 Mm.25157 NM_025542 ENSMUSG00000027502 Rtfdc1 1700067C04Rik|2410001C21Rik|5730427M17Rik|AA589417 replication termination factor 2 domain containing 1 protein-coding common_peak2_86_698_-0.156350814709583_9.37097323802064_1.12756863076972 chr7 120916972 120918884 + 1.12756863076972 NA intron (NM_001164096, intron 1 of 19) CpG 184 NM_001164096 26939 Mm.193632 NM_025298 ENSMUSG00000030880 Polr3e RPC5|Sin polymerase (RNA) III (DNA directed) polypeptide E protein-coding common_peak2_44_327_-0.231373367053452_8.24186532109136_1.12748495651453 chr10 72654801 72655647 + 1.12748495651453 NA intron (NM_001293683, intron 1 of 7) intron (NM_001293683, intron 1 of 7) 378 NM_001293683 52696 Mm.62876 NM_025635 ENSMUSG00000019923 Zwint 2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1 ZW10 interactor protein-coding common_peak1_304_3073_-0.0732764117654803_11.549263243808_1.12700128722166 chr1 161772563 161775904 + 1.12700128722166 NA Intergenic Intergenic 14262 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_76_606_-0.168831165482615_9.16113712351437_1.1268737702074 chr9 122865263 122866265 + 1.1268737702074 NA intron (NM_173364, intron 1 of 6) CpG 242 NM_173364 235682 Mm.326477 NM_173364 ENSMUSG00000047036 Zfp445 AW610627|ZNF168|Znf445|mszf29|mszf50 zinc finger protein 445 protein-coding common_peak2_76_606_-0.168831165482615_9.16113712351437_1.1268737702074 chrX 104482529 104484147 + 1.1268737702074 NA exon (NM_001081189, exon 1 of 7) exon (NM_001081189, exon 1 of 7) 556 NM_001081189 331487 Mm.438275 NM_001081189 ENSMUSG00000073016 Uprt Gm774 uracil phosphoribosyltransferase protein-coding common_peak1_82_661_-0.161181537638869_9.29009663798778_1.12653770693927 chr18 4375345 4376262 + 1.12653770693927 NA intron (NM_026157, intron 1 of 8) CpG 211 NM_026157 67440 Mm.49826 NM_026157 ENSMUSG00000024234 Mtpap 0610027A18Rik|AW551379|Papd1 mitochondrial poly(A) polymerase protein-coding common_peak2_84_680_-0.15986914015958_9.33157641793228_1.12625811297739 chr2 11159214 11161052 + 1.12625811297739 NA Intergenic Intergenic -12249 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak2_39_201_0.259535056065338_7.78797901078446_1.12619346677049-2 chr13 49205962 49206925 + 1.12619346677049 NA intron (NM_026738, intron 2 of 5) MIRb|SINE|MIR 9583 NM_026738 68480 Mm.3336 NM_026738 ENSMUSG00000037960 Card19 1110007C09Rik|AI851695|Bincard caspase recruitment domain family, member 19 protein-coding common_peak2_39_201_0.259535056065338_7.78797901078446_1.12619346677049 chr1 121567176 121568194 + 1.12619346677049 NA intron (NM_025860, intron 1 of 12) CpG 295 NM_025860 66942 Mm.44219 NM_025860 ENSMUSG00000001674 Ddx18 2310005B10Rik DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein-coding common_peak1_61_472_-0.192401857418732_8.78949544463003_1.12609314136558 chr11 115173837 115174503 + 1.12609314136558 NA intron (NM_012030, intron 1 of 5) intron (NM_012030, intron 1 of 5) 10829 NM_012030 26941 Mm.27842 NM_012030 ENSMUSG00000020733 Slc9a3r1 EBP-50|NHE-RF|NHERF-1|NHERF1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 protein-coding common_peak1_36_181_0.271989011012714_7.64378914570505_1.12597666843506-3 chr7 126928931 126929631 + 1.12597666843506 NA exon (NM_172747, exon 1 of 6) exon (NM_172747, exon 1 of 6) 402 NM_172747 233877 Mm.245897 NM_172747 ENSMUSG00000030685 Kctd13 1500003N18Rik|AV259508|PDIP1alpha|Pdip1|Poldip1 potassium channel tetramerisation domain containing 13 protein-coding common_peak1_36_181_0.271989011012714_7.64378914570505_1.12597666843506 chr10 5163188 5163884 + 1.12597666843506 NA intron (NM_001079686, intron 7 of 54) intron (NM_001079686, intron 7 of 54) 31171 NM_001079686 64009 Mm.331626 NM_022027 ENSMUSG00000096054 Syne1 8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756|myne-1 spectrin repeat containing, nuclear envelope 1 protein-coding common_peak1_36_181_0.271989011012714_7.64378914570505_1.12597666843506-2 chr16 17726778 17727406 + 1.12597666843506 NA Intergenic Intergenic -4145 NM_001040683 94112 Mm.208970 NM_033609 ENSMUSG00000012114 Med15 A230074L19Rik|AW536074|Pcqap|mPcqap mediator complex subunit 15 protein-coding common_peak1_32_231_-0.280661047466692_7.71765047139423_1.12557435943889-2 chr18 80683973 80684501 + 1.12557435943889 NA intron (NM_198429, intron 2 of 9) intron (NM_198429, intron 2 of 9) 23936 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_32_231_-0.280661047466692_7.71765047139423_1.12557435943889-2 chr3 155092695 155093955 + 1.12557435943889 NA promoter-TSS (NM_029330) promoter-TSS (NM_029330) 53 NM_029330 75540 Mm.35218 NM_029330 ENSMUSG00000053870 Fpgt 1700016E03Rik fucose-1-phosphate guanylyltransferase protein-coding common_peak1_32_231_-0.280661047466692_7.71765047139423_1.12557435943889 chr1 86213060 86213653 + 1.12557435943889 NA intron (NM_001310702, intron 19 of 24) intron (NM_001310702, intron 19 of 24) 58576 NM_001310702 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding common_peak2_32_231_-0.280661047466692_7.71765047139423_1.12557435943889 chr11 95666798 95667602 + 1.12557435943889 NA intron (NM_008831, intron 1 of 6) intron (NM_008831, intron 1 of 6) 243 NM_008831 18673 Mm.263862 NM_008831 ENSMUSG00000038845 Phb Bap32 prohibitin protein-coding common_peak1_47_256_0.234763230084573_8.12300616423617_1.12541246188954 chr6 85936701 85937647 + 1.12541246188954 NA Intergenic CpG 21455 NM_001170488 69786 Mm.218434 NM_176842 ENSMUSG00000054226 Tprkb 0610033G21Rik|1810034M08Rik|Cgi-121|DRWMS1|mDRWMS1 Tp53rk binding protein protein-coding common_peak2_47_256_0.234763230084573_8.12300616423617_1.12541246188954-2 chrX 49287492 49288471 + 1.12541246188954 NA intron (NM_145951, intron 1 of 15) intron (NM_145951, intron 1 of 15) 261 NM_001271449 209224 Mm.327730 NM_145951 ENSMUSG00000031109 Enox2 APK1|Cova1|tNOX ecto-NOX disulfide-thiol exchanger 2 protein-coding common_peak2_47_256_0.234763230084573_8.12300616423617_1.12541246188954 chr10 7666964 7668105 + 1.12541246188954 NA promoter-TSS (NM_145706) promoter-TSS (NM_145706) 30 NM_145706 69912 Mm.299887 NM_145706 ENSMUSG00000040034 Nup43 2610016K01Rik|2610529I12Rik|AA409950|p42 nucleoporin 43 protein-coding common_peak2_268_2369_0.079687777783386_11.2505152326773_1.12517376072443 chr13 45452778 45456582 + 1.12517376072443 NA Intergenic Intergenic -52764 NM_025508 66355 Mm.290802 NM_025508 ENSMUSG00000000253 Gmpr 2310004P21Rik|AV028449|GMPR 1 guanosine monophosphate reductase protein-coding common_peak2_196_1597_0.097054923697323_10.6905791547766_1.12511235135559-2 chr4 143160670 143162761 + 1.12511235135559 NA intron (NM_001081355, intron 6 of 9) CpG -25553 NR_105988 102465618 NR_105988 ENSMUSG00000106597 Mir7021 mmu-mir-7021 microRNA 7021 ncRNA common_peak2_196_1597_0.097054923697323_10.6905791547766_1.12511235135559 chr1 75520790 75522593 + 1.12511235135559 NA intron (NM_027886, intron 1 of 24) CpG 162 NM_027886 71728 Mm.312650 NM_027886 ENSMUSG00000026213 Stk11ip 1200014D22Rik|BB131189|LIP1|LKB1IP serine/threonine kinase 11 interacting protein protein-coding common_peak2_166_1295_0.106896602803335_10.3932983042863_1.12438167438943 chr1 86209188 86214905 + 1.12438167438943 NA intron (NM_001310702, intron 18 of 24) intron (NM_001310702, intron 18 of 24) 57266 NM_001310702 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding common_peak2_172_1564_-0.102736410327431_10.5605787366563_1.12414777891478 chr18 31633579 31635700 + 1.12414777891478 NA intron (NM_172965, intron 1 of 20) CpG 256 NM_172965 269003 Mm.194538 NM_172965 ENSMUSG00000024260 Sap130 2610304F09Rik|6720406D06 Sin3A associated protein protein-coding common_peak1_35_254_-0.263055763799835_7.86282555495894_1.12413733589872 chr19 6276853 6277555 + 1.12413733589872 NA exon (NM_010119, exon 1 of 5) exon (NM_010119, exon 1 of 5) 308 NM_010119 13660 Mm.30169 NM_010119 ENSMUSG00000024772 Ehd1 AA409636|Past1|RME-1 EH-domain containing 1 protein-coding common_peak2_35_254_-0.263055763799835_7.86282555495894_1.12413733589872 chr11 58167939 58168943 + 1.12413733589872 NA promoter-TSS (NM_001166670) promoter-TSS (NM_001166670) 98 NM_172558 216766 Mm.275349 NM_172558 ENSMUSG00000037275 Gemin5 AA407055|AA407208|AI451603|BB194447|C330013N08 gem (nuclear organelle) associated protein 5 protein-coding common_peak1_20_83_0.385157221019737_6.58489603328863_1.12393555493092-2 chr5 134099678 134100249 + 1.12393555493092 NA 5' UTR (NM_030719, exon 1 of 9) 5' UTR (NM_030719, exon 1 of 9) 215 NM_030719 80909 Mm.45218 NM_030719 ENSMUSG00000015944 Gatsl2 7530428J21Rik|AW742413|Gats|Gatsl1 GATS protein-like 2 protein-coding common_peak2_20_83_0.385157221019737_6.58489603328863_1.12393555493092 chr14 56240594 56241226 + 1.12393555493092 NA Intergenic RMER1A|Other|Other -6253 NM_010371 14940 Mm.14465 NM_010371 ENSMUSG00000079186 Gzmc AI323531|B10|CCP2|Ctla-5|Ctla5 granzyme C protein-coding common_peak1_20_83_0.385157221019737_6.58489603328863_1.12393555493092 chr11 70808723 70809188 + 1.12393555493092 NA intron (NM_001045526, intron 1 of 4) intron (NM_001045526, intron 1 of 4) 3606 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak2_20_83_0.385157221019737_6.58489603328863_1.12393555493092-2 chr5 134099662 134100236 + 1.12393555493092 NA 5' UTR (NM_030719, exon 1 of 9) 5' UTR (NM_030719, exon 1 of 9) 201 NM_030719 80909 Mm.45218 NM_030719 ENSMUSG00000015944 Gatsl2 7530428J21Rik|AW742413|Gats|Gatsl1 GATS protein-like 2 protein-coding unique_peak2_20_83_0.385157221019737_6.58489603328863_1.12393555493092 chr10 21196713 21197350 + 1.12393555493092 NA Intergenic Intergenic -36047 NM_010848 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding unique_peak2_20_83_0.385157221019737_6.58489603328863_1.12393555493092-2 chr10 40141598 40142239 + 1.12393555493092 NA exon (NM_028247, exon 1 of 3) exon (NM_028247, exon 1 of 3) 336 NM_028247 72472 Mm.186778 NM_028247 ENSMUSG00000019838 Slc16a10 2610103N14Rik|9830169E08|Mct10|PRO0813|TAT1 solute carrier family 16 (monocarboxylic acid transporters), member 10 protein-coding common_peak1_112_785_0.137133995913794_9.6869525002155_1.12318573454405 chr12 105021597 105023112 + 1.12318573454405 NA Intergenic Intergenic 8787 NR_037229 100526471 NR_037229 ENSMUSG00000106366 Mir3069 mir-3069|mmu-mir-3069 microRNA 3069 ncRNA common_peak1_117_997_-0.130757289109079_9.89751736078272_1.12313980693067 chr2 173408464 173409818 + 1.12313980693067 NA Intergenic Intergenic -113451 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding common_peak2_29_136_0.310624349637177_7.25334425777911_1.12306033813495 chr17 56761799 56762820 + 1.12306033813495 NA Intergenic Intergenic -2442 NM_144858 224907 Mm.293973 NM_144858 ENSMUSG00000007603 Dus3l AI662135|AW557805 dihydrouridine synthase 3-like (S. cerevisiae) protein-coding common_peak1_29_136_0.310624349637177_7.25334425777911_1.12306033813495 chr2 35678888 35679467 + 1.12306033813495 NA intron (NM_001290641, intron 3 of 15) intron (NM_001290641, intron 3 of 15) -12817 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_29_136_0.310624349637177_7.25334425777911_1.12306033813495-2 chr4 144905932 144906614 + 1.12306033813495 NA intron (NM_011303, intron 1 of 5) intron (NM_011303, intron 1 of 5) 13136 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding unique_peak2_24_170_-0.331837322749514_7.25193385351114_1.12306033813495 chr2 172433255 172434633 + 1.12306033813495 NA TTS (NM_001080820) TTS (NM_001080820) -6634 NM_025542 66404 Mm.25157 NM_025542 ENSMUSG00000027502 Rtfdc1 1700067C04Rik|2410001C21Rik|5730427M17Rik|AA589417 replication termination factor 2 domain containing 1 protein-coding common_peak1_72_446_0.17818800520231_8.89322502378447_1.12271951230834 chr18 75261878 75263044 + 1.12271951230834 NA intron (NM_027727, intron 16 of 16) intron (NM_027727, intron 16 of 16) 34856 NR_045394 100503117 Mm.250517 NR_045393 ENSMUSG00000102047 2010010A06Rik 5033420E22Rik RIKEN cDNA 2010010A06 gene ncRNA common_peak1_59_345_0.200640516147335_8.53494848571039_1.12267863550203-2 chr6 30693085 30693834 + 1.12267863550203 NA intron (NR_130775, intron 1 of 2) CpG 290 NM_031998 83922 Mm.65389 NM_031998 ENSMUSG00000029790 Cep41 1700017E11Rik|2810431D15Rik|Tsga14 centrosomal protein 41 protein-coding common_peak1_59_345_0.200640516147335_8.53494848571039_1.12267863550203 chr5 135540535 135541593 + 1.12267863550203 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 4058 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak1_86_560_0.160940870057059_9.21232739563732_1.12267467404099 chr10 89685684 89686544 + 1.12267467404099 NA promoter-TSS (NR_130956) promoter-TSS (NR_130956) 171 NM_198021 213326 Mm.27651 NM_198021 ENSMUSG00000069539 Scyl2 AU015688|AW536445|BC030932|CVAK104|D10Ertd802e SCY1-like 2 (S. cerevisiae) protein-coding common_peak1_41_303_-0.24384055845873_8.12600723421422_1.12246157636239 chr9 44881491 44882173 + 1.12246157636239 NA promoter-TSS (NM_001081049) promoter-TSS (NM_001081049) -558 NM_001081049 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak2_41_303_-0.24384055845873_8.12600723421422_1.12246157636239 chr18 82536286 82538300 + 1.12246157636239 NA intron (NM_010777, intron 3 of 6) intron (NM_010777, intron 3 of 6) -17170 NM_001025256 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_18_126_-0.388320483375275_6.79452444508453_1.12228147763065 chr6 120865939 120866586 + 1.12228147763065 NA intron (NM_153516, intron 4 of 6) intron (NM_153516, intron 4 of 6) 30032 NM_153516 94044 Mm.27990 NM_153516 ENSMUSG00000009112 Bcl2l13 BCL-RAMBO|E430016C20Rik|Mil-1|Mil1 BCL2-like 13 (apoptosis facilitator) protein-coding common_peak1_18_126_-0.388320483375275_6.79452444508453_1.12228147763065 chr11 4237786 4238244 + 1.12228147763065 NA intron (NM_001013365, intron 1 of 2) intron (NM_001013365, intron 1 of 2) 1230 NM_001013365 18413 Mm.131422 NM_001013365 ENSMUSG00000058755 Osm OncoM oncostatin M protein-coding common_peak1_18_126_-0.388320483375275_6.79452444508453_1.12228147763065-2 chr2 120499857 120500305 + 1.12228147763065 NA intron (NM_007601, intron 15 of 23) intron (NM_007601, intron 15 of 23) 23172 NM_001109761 12335 Mm.458021 NM_007601 ENSMUSG00000079110 Capn3 AI323605|Capa-3|Capa3|Lp82|p94 calpain 3 protein-coding common_peak1_18_126_-0.388320483375275_6.79452444508453_1.12228147763065-3 chr3 59228961 59229460 + 1.12228147763065 NA intron (NM_177855, intron 16 of 43) intron (NM_177855, intron 16 of 43) -18328 NM_028808 74191 Mm.90067 NM_028808 ENSMUSG00000036362 P2ry13 2010001L06Rik|GPCR1|GPR94|Gpr86|P2Y13|P2yr13|SP174 purinergic receptor P2Y, G-protein coupled 13 protein-coding common_peak1_186_1715_-0.097916163397521_10.6958757558008_1.12213081015198 chr11 98808607 98810577 + 1.12213081015198 NA promoter-TSS (NM_138660) promoter-TSS (NM_138660) -216 NM_138660 192160 Mm.40120 NM_138660 ENSMUSG00000078676 Casc3 Btz|Mln51 cancer susceptibility candidate 3 protein-coding common_peak2_167_1511_-0.104930846863505_10.5097770007893_1.12193009709992 chr2 155517016 155519531 + 1.12193009709992 NA exon (NM_019811, exon 1 of 18) exon (NM_019811, exon 1 of 18) 230 NM_019811 60525 Mm.255026 NM_019811 ENSMUSG00000027605 Acss2 1110017C11Rik|ACAS|Acas1|Acas2|AceCS1|Acs1 acyl-CoA synthetase short-chain family member 2 protein-coding common_peak2_326_3339_-0.0697556356784936_11.6707545695222_1.12191322839635 chr11 60536649 60539681 + 1.12191322839635 NA 5' UTR (NM_172943, exon 1 of 4) 5' UTR (NM_172943, exon 1 of 4) 482 NM_172943 268420 Mm.262056 NM_172943 ENSMUSG00000042650 Alkbh5 AW050020|AW215868|Abh5|E130207K11|Ofoxd alkB homolog 5, RNA demethylase protein-coding common_peak1_74_462_0.175281325029431_8.94250904577495_1.12186466905235 chr1 92774323 92775132 + 1.12186466905235 NA Intergenic Intergenic -56959 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak1_191_1546_0.0983549202021283_10.6444349415501_1.12176661962392 chr10 77518597 77521139 + 1.12176661962392 NA Intergenic B1_Mus1|SINE|Alu -4055 NM_133998 108707 Mm.259547 NM_133998 ENSMUSG00000032977 Fam207a 1810008A18Rik|AI303072 family with sequence similarity 207, member A protein-coding common_peak2_25_112_0.335242282225744_6.98780010352806_1.12140477588479 chr13 5713990 5714855 + 1.12140477588479 NA Intergenic Intergenic 143670 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_25_112_0.335242282225744_6.98780010352806_1.12140477588479 chr3 159495009 159495438 + 1.12140477588479 NA promoter-TSS (NM_029523) promoter-TSS (NM_029523) -210 NM_001172092 76131 Mm.371655 NM_029523 ENSMUSG00000028175 Depdc1a 5830484J08Rik|Depdc1 DEP domain containing 1a protein-coding unique_peak2_28_200_-0.30238837666636_7.49985750284575_1.12139218422176-2 chr17 26662618 26663819 + 1.12139218422176 NA Intergenic Intergenic -13178 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding unique_peak2_28_200_-0.30238837666636_7.49985750284575_1.12139218422176 chr16 32124286 32125259 + 1.12139218422176 NA Intergenic Intergenic 24970 NM_025892 66994 Mm.22990 NM_025892 ENSMUSG00000035790 Cep19 1500031L02Rik|AI428934|AL022620 centrosomal protein 19 protein-coding common_peak1_28_200_-0.30238837666636_7.49985750284575_1.12139218422176 chr13 91701532 91702172 + 1.12139218422176 NA non-coding (NR_015501, exon 2 of 2) non-coding (NR_015501, exon 2 of 2) -39669 NM_028790 74156 Mm.275963 NM_028790 ENSMUSG00000021620 Acot12 1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1 acyl-CoA thioesterase 12 protein-coding common_peak2_244_2105_0.0846921027632881_11.0826357724074_1.12128283801347 chr12 31498411 31500632 + 1.12128283801347 NA promoter-TSS (NM_001253848) promoter-TSS (NM_001253848) 95 NM_134048 104836 Mm.273270 NM_134048 ENSMUSG00000020659 Cbll1 AI467391|Hakai|c-Cbl-like Casitas B-lineage lymphoma-like 1 protein-coding common_peak2_282_2525_0.0775031656552105_11.3413905066152_1.12118456760381 chr8 85024687 85028119 + 1.12118456760381 NA promoter-TSS (NM_026760) promoter-TSS (NM_026760) -430 NM_026760 68544 Mm.196005 NM_026760 ENSMUSG00000041203 2310036O22Rik 1110002H14Rik|AI854688 RIKEN cDNA 2310036O22 gene protein-coding common_peak1_180_1435_0.10136728165331_10.5385236746497_1.12105101567118 chr9 66265018 66267863 + 1.12105101567118 NA intron (NM_010019, intron 9 of 11) intron (NM_010019, intron 9 of 11) -84010 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak1_189_1748_-0.0972324724600853_10.7236983376916_1.1207961647072 chr4 8535427 8536727 + 1.1207961647072 NA intron (NM_021518, intron 1 of 7) CpG 433 NM_021518 59021 Mm.397471 NM_021518 ENSMUSG00000047187 Rab2a 9330148M11Rik|C80220|Rab2 RAB2A, member RAS oncogene family protein-coding common_peak2_296_2976_-0.0740545262705883_11.5026162431027_1.12062144296108 chrX 167205957 167211407 + 1.12062144296108 NA intron (NM_021278, intron 1 of 2) intron (NM_021278, intron 1 of 2) 536 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_183_1465_0.100628349518768_10.5679835628932_1.11980950016824 chr2 52569990 52572389 + 1.11980950016824 NA intron (NM_001285426, intron 2 of 13) intron (NM_001285426, intron 2 of 13) -12578 NM_001285427 12298 Mm.330223 NM_146123 ENSMUSG00000017412 Cacnb4 3110038O15Rik|Cchb4|lh calcium channel, voltage-dependent, beta 4 subunit protein-coding common_peak1_61_360_0.197439489033492_8.59457477140392_1.11978457130201 chr17 56272888 56274122 + 1.11978457130201 NA intron (NM_174989, intron 1 of 1) intron (NM_174989, intron 1 of 1) 3262 NM_174989 106759 Mm.203952 NM_174989 ENSMUSG00000047123 Ticam1 AW046014|AW547018|TICAM-1|TRIF toll-like receptor adaptor molecule 1 protein-coding common_peak1_146_1101_0.11510224449281_10.1634596308176_1.11960116448216 chr1 51500529 51502399 + 1.11960116448216 NA Intergenic Intergenic -23065 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak1_19_77_0.405732008768528_6.48826822324651_1.11939827949934-2 chr3 115692051 115692444 + 1.11939827949934 NA Intergenic Intergenic 22808 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding unique_peak2_19_77_0.405732008768528_6.48826822324651_1.11939827949934-2 chr4 139218231 139218847 + 1.11939827949934 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 24428 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak2_19_77_0.405732008768528_6.48826822324651_1.11939827949934 chr11 97021872 97022538 + 1.11939827949934 NA exon (NM_031183, exon 2 of 2) exon (NM_031183, exon 2 of 2) 4213 NR_133649 100127433 Mm.156282 NR_133649 ENSMUSG00000087067 Gm11532 OTTMUSG00000001860|Sp6os predicted gene 11532 ncRNA common_peak1_19_77_0.405732008768528_6.48826822324651_1.11939827949934-4 chr7 90456250 90456725 + 1.11939827949934 NA intron (NM_025460, intron 1 of 4) PB1D10|SINE|Alu 721 NM_025460 66271 Mm.28963 NM_025460 ENSMUSG00000030615 Tmem126a 1810020E01Rik transmembrane protein 126A protein-coding common_peak1_19_77_0.405732008768528_6.48826822324651_1.11939827949934 chr14 65106087 65106534 + 1.11939827949934 NA Intergenic Intergenic -8204 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak1_19_77_0.405732008768528_6.48826822324651_1.11939827949934-3 chr6 54848254 54848699 + 1.11939827949934 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 31560 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak2_54_307_0.214504477691014_8.37403877954041_1.11937683973313 chr7 90306903 90308892 + 1.11937683973313 NA intron (NM_001289583, intron 1 of 19) intron (NM_001289583, intron 1 of 19) 5542 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak2_54_307_0.214504477691014_8.37403877954041_1.11937683973313 chr11 68863383 68865261 + 1.11937683973313 NA Intergenic MLT1D|LTR|ERVL-MaLR -11191 NM_023668 83431 Mm.31979 NM_023668 ENSMUSG00000018736 Ndel1 2600006O07Rik|MITAP1|NUDEL|mNudel nudE neurodevelopment protein 1 like 1 protein-coding common_peak2_290_2904_-0.074849568775198_11.4668976639043_1.11862513417723 chr8 34214696 34218042 + 1.11862513417723 NA Intergenic Intergenic -49657 NR_105820 102465211 NR_105820 ENSMUSG00000098785 Mir6395 Gm27561|mmu-mir-6395 microRNA 6395 ncRNA common_peak1_67_525_-0.182158105945419_8.94783993631959_1.11854058332283-2 chr6 136966803 136967841 + 1.11854058332283 NA Intergenic Intergenic 12799 NM_023898 78600 Mm.290622 NM_023898 ENSMUSG00000064330 Pde6h A930033D18Rik|PDEgamma phosphodiesterase 6H, cGMP-specific, cone, gamma protein-coding common_peak1_67_525_-0.182158105945419_8.94783993631959_1.11854058332283 chr17 84226404 84227341 + 1.11854058332283 NA intron (NM_183021, intron 34 of 37) intron (NM_183021, intron 34 of 37) -38925 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_69_542_-0.176750362094472_8.99643320675712_1.1182773020755 chr2 115581028 115582264 + 1.1182773020755 NA promoter-TSS (NM_207264) promoter-TSS (NM_207264) -70 NM_207264 399568 Mm.134929 NM_207264 ENSMUSG00000040282 BC052040 - cDNA sequence BC052040 protein-coding common_peak2_46_344_-0.227321464239514_8.31679181954577_1.11774781989467 chr5 92484363 92485694 + 1.11774781989467 NA intron (NM_007644, intron 2 of 11) intron (NM_007644, intron 2 of 11) 20629 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding common_peak2_152_1353_-0.111206730294256_10.3474086584279_1.11758999676413 chr9 48494461 48496173 + 1.11758999676413 NA promoter-TSS (NM_144948) promoter-TSS (NM_144948) 13 NR_037589 67010 Mm.76911 NM_144948 ENSMUSG00000042396 Rbm7 1200007M24Rik|1500011D06Rik|AU041934|AW554393 RNA binding motif protein 7 protein-coding common_peak1_201_1880_-0.0938236287313838_10.8303723191575_1.11712656466929 chr19 6140417 6141745 + 1.11712656466929 NA promoter-TSS (NM_019722) promoter-TSS (NM_019722) 56 NM_019722 56327 Mm.21071 NM_019722 ENSMUSG00000024944 Arl2 2610009M23Rik|AI115441|AW553335 ADP-ribosylation factor-like 2 protein-coding common_peak2_97_654_0.148137451672229_9.42941982226093_1.1171188105907 chr1 86490987 86493288 + 1.1171188105907 NA Intergenic Intergenic -34599 NM_008972 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak2_345_3573_-0.0675010763625838_11.7695733808602_1.11708431142339 chr5 24684257 24688571 + 1.11708431142339 NA intron (NM_001305264, intron 1 of 14) intron (NM_001305264, intron 1 of 14) 599 NM_001305264 53312 Mm.5856 NM_016736 ENSMUSG00000028954 Nub1 4931404D21Rik|6330412F12Rik|BS4|NY-REN-18 negative regulator of ubiquitin-like proteins 1 protein-coding common_peak1_71_560_-0.173946976363414_9.04488347242709_1.1168941524809 chr2 132247163 132248200 + 1.1168941524809 NA 5' UTR (NM_027478, exon 1 of 4) 5' UTR (NM_027478, exon 1 of 4) 107 NM_027478 70612 Mm.30116 NM_027478 ENSMUSG00000027341 Tmem230 5730494N06Rik|AA407821 transmembrane protein 230 protein-coding common_peak2_320_2960_0.0712361603315035_11.5674868553433_1.11665919365581 chr11 79639711 79645807 + 1.11665919365581 NA intron (NM_175543, intron 3 of 14) (TGAG)n|Simple_repeat|Simple_repeat -19596 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202|OTTMUSG00000000185 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA common_peak1_242_2084_0.0846449308141377_11.0681541337391_1.11660121929584 chr4 150927044 150929042 + 1.11660121929584 NA promoter-TSS (NM_001077509) promoter-TSS (NM_001077509) 44 NM_001077509 21942 Mm.244187 NM_011612 ENSMUSG00000028965 Tnfrsf9 4-1BB|A930040I11Rik|AA408498|AI325004|CDw137|Cd137|ILA|Ly63 tumor necrosis factor receptor superfamily, member 9 protein-coding common_peak2_139_1034_0.119255284509558_10.0750426946415_1.11632327157554 chr8 84655977 84658354 + 1.11632327157554 NA Intergenic Intergenic 5687 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding common_peak2_49_271_0.225164662072402_8.20004517228654_1.11629079415954 chr3 131207868 131209432 + 1.11629079415954 NA intron (NM_001276403, intron 11 of 11) intron (NM_001276403, intron 11 of 11) 63451 NM_008212 15107 Mm.260164 NM_008212 ENSMUSG00000027984 Hadh AA409008|AU019341|AW742602|HCDH|Hadhsc|Schad hydroxyacyl-Coenzyme A dehydrogenase protein-coding common_peak1_58_446_-0.198604616141493_8.70482871311257_1.11620215768464 chr1 170949673 170950479 + 1.11620215768464 NA Intergenic RLTR4_Mm|LTR|ERV1 -22493 NR_027666 98752 Mm.1850 NM_145141 ENSMUSG00000038421 Fcrla BB219290|FCRL|FCRL1|FREB|Fcrlm1|Fcrx|Freb1|mFREB|mFcrX Fc receptor-like A protein-coding common_peak2_73_578_-0.17102357559147_9.0919077501935_1.11599793272838 chr9 45234670 45237185 + 1.11599793272838 NA intron (NM_001198971, intron 1 of 4) intron (NM_001198971, intron 1 of 4) 30780 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak2_32_155_0.291917728798631_7.43136108326156_1.11586467381191 chr11 98497014 98497978 + 1.11586467381191 NA intron (NM_011771, intron 3 of 7) intron (NM_011771, intron 3 of 7) 48535 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding common_peak1_227_1923_0.0878302581528452_10.9538082128465_1.11567942597404 chr12 69158291 69159758 + 1.11567942597404 NA exon (NM_009093, exon 1 of 3) exon (NM_009093, exon 1 of 3) 162 NM_009093 20090 Mm.379006 NM_009093 ENSMUSG00000034892 Rps29 - ribosomal protein S29 protein-coding common_peak1_23_162_-0.334952686138982_7.18125181116159_1.11540392349276 chr4 88793706 88794227 + 1.11540392349276 NA promoter-TSS (NM_001161609) promoter-TSS (NM_001161609) 224 NM_001085533 545652 Mm.457965 NM_001085533 ENSMUSG00000099518 Gm13275 OTTMUSG00000011268 predicted gene 13275 protein-coding unique_peak2_23_162_-0.334952686138982_7.18125181116159_1.11540392349276-2 chr17 42876001 42877234 + 1.11540392349276 NA promoter-TSS (NM_009847) promoter-TSS (NM_009847) -193 NM_009847 12488 Mm.218637 NM_009847 ENSMUSG00000061665 Cd2ap AL024079|C78928|METS-1|Mets1 CD2-associated protein protein-coding unique_peak2_23_162_-0.334952686138982_7.18125181116159_1.11540392349276 chr15 75703537 75704801 + 1.11540392349276 NA promoter-TSS (NM_001163465) promoter-TSS (NM_001163465) -119 NM_001163465 14787 Mm.57052 NM_008164 ENSMUSG00000022580 Rhpn1 BB023497|Grbp|Rhophilin|mKIAA1929 rhophilin, Rho GTPase binding protein 1 protein-coding common_peak1_23_162_-0.334952686138982_7.18125181116159_1.11540392349276-2 chr8 126853482 126853923 + 1.11540392349276 NA Intergenic L1Md_A|LINE|L1 92219 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak1_95_637_0.149587476699939_9.39220635211484_1.11526657050901 chr8 83720740 83722489 + 1.11526657050901 NA intron (NM_197982, intron 5 of 10) intron (NM_197982, intron 5 of 10) 2370 NR_106188 102465897 NR_106188 ENSMUSG00000098465 Mir1668 Gm27590|mmu-mir-1668 microRNA 1668 ncRNA common_peak1_240_2319_-0.0840575947602851_11.1378802926348_1.11520417028385 chr17 53566803 53568902 + 1.11520417028385 NA intron (NM_020005, intron 1 of 17) CpG 881 NM_020005 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding common_peak1_83_670_-0.159469690028972_9.3104341111857_1.11483521363967 chr11 83473106 83474164 + 1.11483521363967 NA intron (NM_027427, intron 1 of 15) CpG 527 NM_027427 70439 Mm.181050 NM_027427 ENSMUSG00000020680 Taf15 2610111C21Rik|68kDa|TAFII68|Taf2n TATA-box binding protein associated factor 15 protein-coding common_peak1_35_174_0.280086561226694_7.59125439244568_1.11468043673086 chr17 45736882 45737656 + 1.11468043673086 NA Intergenic Intergenic -3425 NM_028164 72240 Mm.482897 NM_028164 ENSMUSG00000094690 1600014C23Rik - RIKEN cDNA 1600014C23 gene protein-coding common_peak1_35_174_0.280086561226694_7.59125439244568_1.11468043673086-2 chr3 79567686 79568452 + 1.11468043673086 NA promoter-TSS (NM_001162999) promoter-TSS (NM_001162999) -390 NM_001162999 329679 Mm.244005 NM_001162999 ENSMUSG00000061175 Fnip2 D630023B12Rik|mKIAA1450 folliculin interacting protein 2 protein-coding unique_peak2_35_174_0.280086561226694_7.59125439244568_1.11468043673086 chr15 50361266 50362505 + 1.11468043673086 NA Intergenic MIR3|SINE|MIR 527164 NM_001310481 83925 Mm.30466 NM_032000 ENSMUSG00000038679 Trps1 AI115454|AI447310|D15Ertd586e trichorhinophalangeal syndrome I (human) protein-coding common_peak1_100_830_-0.141856473164887_9.6277764301879_1.11465865590504 chr5 113620645 113621827 + 1.11465865590504 NA intron (NM_008153, intron 1 of 2) L4_B_Mam|LINE|RTE-X 29154 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak1_127_922_0.125903359038462_9.91313851716501_1.11461056536983 chr12 28751263 28752579 + 1.11461056536983 NA promoter-TSS (NM_201357) promoter-TSS (NM_201357) 93 NM_201357 380752 Mm.273724 NM_201357 ENSMUSG00000036613 Tssc1 D12Ertd604e|Eipr1 tumor suppressing subtransferable candidate 1 protein-coding common_peak1_79_633_-0.163980180135919_9.22634894007145_1.11444275480516 chr3 115887379 115888180 + 1.11444275480516 NA promoter-TSS (NM_027193) promoter-TSS (NM_027193) 280 NR_027894 68161 Mm.392043 NR_015487 ENSMUSG00000054426 A930005H10Rik - RIKEN cDNA A930005H10 gene ncRNA common_peak1_17_119_-0.402205233735851_6.70578797874059_1.11413229790769-2 chrX 96097631 96097988 + 1.11413229790769 NA intron (NM_010833, intron 1 of 12) B1F|SINE|Alu 1764 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding unique_peak2_17_119_-0.402205233735851_6.70578797874059_1.11413229790769 chr10 8136045 8136862 + 1.11413229790769 NA Intergenic RMER30|DNA|hAT-Charlie -180330 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_17_119_-0.402205233735851_6.70578797874059_1.11413229790769 chr15 58076904 58077335 + 1.11413229790769 NA promoter-TSS (NM_001042438) promoter-TSS (NM_001042438) -611 NM_009572 22770 Mm.244931 NM_009572 ENSMUSG00000022361 Zhx1 - zinc fingers and homeoboxes 1 protein-coding unique_peak2_17_119_-0.402205233735851_6.70578797874059_1.11413229790769-2 chr17 35590640 35591313 + 1.11413229790769 NA Intergenic Intergenic 23491 NM_175148 69542 Mm.265291 NM_175148 ENSMUSG00000039269 2300002M23Rik Stg|emprin RIKEN cDNA 2300002M23 gene protein-coding common_peak2_38_194_0.26561313585825_7.74013688167874_1.11398124264764 chr13 53015570 53017000 + 1.11398124264764 NA Intergenic Intergenic -35246 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak2_38_194_0.26561313585825_7.74013688167874_1.11398124264764-2 chr7 125473989 125475536 + 1.11398124264764 NA intron (NM_026330, intron 2 of 7) intron (NM_026330, intron 2 of 7) 16780 NM_026330 67711 Mm.4467 NM_026330 ENSMUSG00000030750 Nsmce1 2510027N19Rik NSE1 homolog, SMC5-SMC6 complex component protein-coding common_peak2_53_402_-0.205816150502017_8.55172795327696_1.1139113978941 chr3 88502266 88503452 + 1.1139113978941 NA exon (NM_001111102, exon 1 of 10) exon (NM_001111102, exon 1 of 10) 493 NM_001111102 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_31_223_-0.28448934774608_7.66511024818456_1.11377756973449-3 chr6 48593116 48593865 + 1.11377756973449 NA promoter-TSS (NM_001079905) promoter-TSS (NM_001079905) -393 NM_001079903 58887 Mm.219183 NM_175099 ENSMUSG00000052751 Repin1 AI425994|Ap4|E430037F08Rik|Zfp-464|Zfp464 replication initiator 1 protein-coding common_peak1_31_223_-0.28448934774608_7.66511024818456_1.11377756973449-2 chr11 58168022 58168675 + 1.11377756973449 NA exon (NM_001166670, exon 1 of 28) exon (NM_001166670, exon 1 of 28) 191 NM_172558 216766 Mm.275349 NM_172558 ENSMUSG00000037275 Gemin5 AA407055|AA407208|AI451603|BB194447|C330013N08 gem (nuclear organelle) associated protein 5 protein-coding common_peak1_31_223_-0.28448934774608_7.66511024818456_1.11377756973449 chr10 118418653 118419171 + 1.11377756973449 NA Intergenic Intergenic -22134 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak1_93_620_0.151293940391893_9.35409642841643_1.1136471040519 chr4 144898163 144899562 + 1.1136471040519 NA intron (NM_011303, intron 1 of 5) B3A|SINE|B2 5725 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak2_60_463_-0.1934615440806_8.76125022308727_1.11347896742564 chr6 143750793 143752109 + 1.11347896742564 NA Intergenic Intergenic -100163 NR_045732 73425 Mm.417844 NR_045732 ENSMUSG00000086887 1700060C16Rik - RIKEN cDNA 1700060C16 gene ncRNA common_peak1_113_795_0.134486410192881_9.70386782564009_1.11332624554839 chr5 124014440 124015909 + 1.11332624554839 NA intron (NM_177876, intron 1 of 3) intron (NM_177876, intron 1 of 3) 17086 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak2_187_1506_0.0988920082009077_10.6069097056983_1.11298880104062 chr2 167647765 167651056 + 1.11298880104062 NA intron (NM_145538, intron 2 of 5) intron (NM_145538, intron 2 of 5) 12134 NM_145538 407243 Mm.4863 NM_145538 ENSMUSG00000090213 Tmem189 AI840826|Kua transmembrane protein 189 protein-coding common_peak2_207_1712_0.0929487421160005_10.788783807142_1.11263719343643 chr2 127246898 127249091 + 1.11263719343643 NA promoter-TSS (NM_025296) promoter-TSS (NM_025296) 19 NM_175145 69470 Mm.200889 NM_175145 ENSMUSG00000034850 Tmem127 2310003P10Rik|AI314202|AI317350 transmembrane protein 127 protein-coding common_peak2_282_2808_-0.0756988196836339_11.4179914992846_1.11245870141991 chr2 165211199 165214627 + 1.11245870141991 NA intron (NM_174988, intron 1 of 11) intron (NM_174988, intron 1 of 11) 21824 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak2_48_360_-0.218978789976486_8.38636563189893_1.11203464582559 chr17 71287422 71289084 + 1.11203464582559 NA intron (NM_145158, intron 2 of 7) intron (NM_145158, intron 2 of 7) 22712 NM_145158 246707 Mm.23462 NM_145158 ENSMUSG00000024053 Emilin2 FOAP-10 elastin microfibril interfacer 2 protein-coding common_peak2_190_1537_0.0975317180249675_10.6356056469743_1.11172143288091 chr9 13296011 13301785 + 1.11172143288091 NA Intergenic Intergenic 51919 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding common_peak1_69_422_0.18354417258994_8.81628593941492_1.11143746785187 chr15 77789222 77790460 + 1.11143746785187 NA intron (NM_022410, intron 10 of 40) intron (NM_022410, intron 10 of 40) -34612 NM_001081970 239552 Mm.125650 NM_001081970 ENSMUSG00000056656 Apol8 9830006J20Rik|APOL-II|Apol2 apolipoprotein L 8 protein-coding common_peak1_27_192_-0.305892287250155_7.439510893643_1.11116484769681-3 chr2 166235160 166235763 + 1.11116484769681 NA Intergenic PB1D11|SINE|Alu -38447 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 OTTMUSG00000001131 predicted gene 11468 ncRNA common_peak1_27_192_-0.305892287250155_7.439510893643_1.11116484769681-2 chr19 29454354 29455021 + 1.11116484769681 NA intron (NM_021396, intron 5 of 5) intron (NM_021396, intron 5 of 5) 43768 NM_021396 58205 Mm.116737 NM_021396 ENSMUSG00000016498 Pdcd1lg2 B7-DC|Btdc|F730015O22Rik|PD-L2 programmed cell death 1 ligand 2 protein-coding common_peak1_27_192_-0.305892287250155_7.439510893643_1.11116484769681 chr1 52040828 52041487 + 1.11116484769681 NA intron (NM_011487, intron 3 of 23) Lx2B2|LINE|L1 32917 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 protein-coding common_peak1_96_792_-0.14583869234057_9.5582577095337_1.11080906393815 chr3 100162360 100163302 + 1.11080906393815 NA promoter-TSS (NM_175552) promoter-TSS (NM_175552) 368 NR_104341 14547 Mm.279228 NM_010269 ENSMUSG00000027865 Gdap2 C77050|D3Ertd801e ganglioside-induced differentiation-associated-protein 2 protein-coding common_peak2_24_106_0.344548205735237_6.91374108926876_1.11068363549827-2 chr2 32916904 32917583 + 1.11068363549827 NA intron (NM_146119, intron 5 of 13) intron (NM_146119, intron 5 of 13) 41109 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_24_106_0.344548205735237_6.91374108926876_1.11068363549827 chr1 161727181 161727824 + 1.11068363549827 NA Intergenic CpG 60993 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_24_106_0.344548205735237_6.91374108926876_1.11068363549827-3 chr8 117304917 117305967 + 1.11068363549827 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -43728 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_24_106_0.344548205735237_6.91374108926876_1.11068363549827 chr13 59456413 59457215 + 1.11068363549827 NA intron (NM_001284221, intron 24 of 24) intron (NM_001284221, intron 24 of 24) 87637 NM_001284221 67269 Mm.153008 NM_023328 ENSMUSG00000021557 Agtpbp1 1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd ATP/GTP binding protein 1 protein-coding common_peak2_390_3792_0.0630693903937019_11.9206583514911_1.11042619175814 chr7 27590410 27593943 + 1.11042619175814 NA intron (NM_001110208, intron 1 of 13) intron (NM_001110208, intron 1 of 13) 616 NM_001110208 11652 Mm.177194 NM_007434 ENSMUSG00000004056 Akt2 2410016A19Rik|AW554154|PKB|PKBbeta thymoma viral proto-oncogene 2 protein-coding common_peak1_150_1139_0.113702275933447_10.2116692470188_1.11014278930233 chr17 33553119 33555126 + 1.11014278930233 NA TTS (NM_172619) TTS (NM_172619) -1585 NM_053214 17916 Mm.42019 NM_053214 ENSMUSG00000024300 Myo1f C330006B10Rik myosin IF protein-coding unique_peak2_9_64_-0.557845896584035_5.74344486473644_1.10994003514438 chr2 71866259 71866869 + 1.10994003514438 NA intron (NR_039557, intron 3 of 3).2 intron (NR_039557, intron 3 of 3).2 -6660 NM_172665 228026 Mm.34411 NM_172665 ENSMUSG00000006494 Pdk1 B830012B01|D530020C15Rik pyruvate dehydrogenase kinase, isoenzyme 1 protein-coding unique_peak2_9_64_-0.557845896584035_5.74344486473644_1.10994003514438-2 chrX 75750772 75751301 + 1.10994003514438 NA intron (NR_029443, intron 4 of 8) intron (NR_029443, intron 4 of 8) 13663 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA common_peak2_85_552_0.161203811205597_9.19173757583751_1.1099151909185 chr2 132642658 132644471 + 1.1099151909185 NA intron (NR_033468, intron 4 of 5) MTC|LTR|ERVL-MaLR 45368 NR_033469 767814 Mm.371752 NR_033468 ENSMUSG00000074783 AU019990 - expressed sequence AU019990 ncRNA common_peak1_37_270_-0.255172526770624_7.95456277796856_1.10989854596203 chr14 27229629 27230369 + 1.10989854596203 NA intron (NM_001289686, intron 3 of 12) intron (NM_001289686, intron 3 of 12) -8011 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_28_130_0.315240312975118_7.19104315802501_1.10982127919024 chr10 81563820 81564816 + 1.10982127919024 NA intron (NR_074087, intron 3 of 6) intron (NR_074087, intron 3 of 6) 4874 NM_001276288 14797 Mm.180013 NM_010347 ENSMUSG00000054452 Aes AL024115|Esp1|Grg|Grg-5|Grg5|Tle5 amino-terminal enhancer of split protein-coding common_peak2_28_130_0.315240312975118_7.19104315802501_1.10982127919024-2 chr17 23739773 23740983 + 1.10982127919024 NA promoter-TSS (NM_023824) promoter-TSS (NM_023824) -48 NM_023824 76498 Mm.491253 NM_023824 ENSMUSG00000023909 Paqr4 1500004C10Rik progestin and adipoQ receptor family member IV protein-coding common_peak1_28_130_0.315240312975118_7.19104315802501_1.10982127919024 chr18 82536357 82537001 + 1.10982127919024 NA intron (NM_010777, intron 3 of 6) intron (NM_010777, intron 3 of 6) -17784 NM_001025256 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_28_130_0.315240312975118_7.19104315802501_1.10982127919024-3 chr2 6715021 6716126 + 1.10982127919024 NA intron (NM_001310447, intron 1 of 11) intron (NM_001310447, intron 1 of 11) 6089 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_28_130_0.315240312975118_7.19104315802501_1.10982127919024-2 chr3 9802326 9802927 + 1.10982127919024 NA intron (NM_001195031, intron 1 of 8) intron (NM_001195031, intron 1 of 8) 31053 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding common_peak2_172_1563_-0.101814265814804_10.5601176644_1.10909874315685 chr17 12362772 12365459 + 1.10909874315685 NA Intergenic Intergenic -14494 NM_008877 18815 Mm.971 NM_008877 ENSMUSG00000059481 Plg AI649309|Pg plasminogen protein-coding common_peak2_250_2172_0.082325021632716_11.1266349699976_1.10899966221651 chr7 101904854 101907009 + 1.10899966221651 NA promoter-TSS (NM_025605) promoter-TSS (NM_025605) 94 NM_025605 66508 Mm.30003 NM_025605 ENSMUSG00000030842 Lamtor1 2400001E08Rik|Pdro|p18 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 protein-coding common_peak1_51_286_0.217126629151601_8.27347024125149_1.10878520838364 chr14 75191497 75192257 + 1.10878520838364 NA intron (NM_008879, intron 2 of 16) intron (NM_008879, intron 2 of 16) -50410 NM_019775 56373 Mm.24242 NM_019775 ENSMUSG00000021999 Cpb2 1110032P04Rik|4930405E17Rik|AI255929|CPR|Cpu|TAFI carboxypeptidase B2 (plasma) protein-coding common_peak1_75_470_0.174005576156819_8.96658603769119_1.10872802255833 chr17 29497577 29498864 + 1.10872802255833 NA Intergenic Intergenic 7175 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak2_174_1375_0.103286546699756_10.477908028052_1.10867660491672 chr1 60179356 60181427 + 1.10867660491672 NA promoter-TSS (NM_173444) promoter-TSS (NM_173444) -208 NM_173444 269198 Mm.205224 NM_173444 ENSMUSG00000073664 Nbeal1 2310076G13Rik|A530050O19Rik|A530083I02Rik|AI662228|ALS2CR17 neurobeachin like 1 protein-coding common_peak1_185_1486_0.0992401000215271_10.5878089820632_1.10863616820964 chr10 88378910 88380710 + 1.10863616820964 NA intron (NM_001004164, intron 1 of 20) intron (NM_001004164, intron 1 of 20) 398 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak2_64_498_-0.185981485004364_8.86990526283508_1.10827635159659 chr13 113134177 113136844 + 1.10827635159659 NA promoter-TSS (NR_131045) promoter-TSS (NR_131045) -566 NR_131045 76720 Mm.54263 NR_131045 1700084D21Rik - RIKEN cDNA 1700084D21 gene ncRNA common_peak1_64_498_-0.185981485004364_8.86990526283508_1.10827635159659 chr15 75117823 75118647 + 1.10827635159659 NA Intergenic L1MB5|LINE|L1 -6286 NM_001099217 100041546 Mm.482110 NM_001099217 ENSMUSG00000022584 Ly6c2 Ly-6C.2|Ly-6C2 lymphocyte antigen 6 complex, locus C2 protein-coding common_peak1_58_338_0.200384941905481_8.50533393408908_1.10826413333341 chr13 17943629 17944667 + 1.10826413333341 NA promoter-TSS (NM_019491) promoter-TSS (NM_019491) 69 NM_019491 56044 Mm.27348 NM_019491 ENSMUSG00000008859 Rala 3010001O15Rik|AW322615|Ral|Rasl1 v-ral simian leukemia viral oncogene A (ras related) protein-coding common_peak1_126_1086_-0.123925530853263_10.0241734596007_1.1081741050855 chr15 102399148 102400337 + 1.1081741050855 NA Intergenic Intergenic -6574 NM_013672 20683 Mm.4618 NM_013672 ENSMUSG00000001280 Sp1 1110003E12Rik|AA450830|AI845540|Sp1-1 trans-acting transcription factor 1 protein-coding common_peak1_92_754_-0.149516113324852_9.48557477755002_1.10777373642709 chr14 118088823 118090202 + 1.10777373642709 NA Intergenic Intergenic -37266 NM_010024 13190 Mm.19987 NM_010024 ENSMUSG00000022129 Dct DT|TRP-2|TRP2|Tyrp-2|Tyrp2|slaty|slt dopachrome tautomerase protein-coding common_peak2_391_3805_0.062653324195729_11.9253865083719_1.10772083738406 chr6 51467610 51471584 + 1.10772083738406 NA intron (NM_016806, intron 1 of 10) CpG 297 NM_182650 53379 Mm.155896 NM_016806 ENSMUSG00000004980 Hnrnpa2b1 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding common_peak2_131_1136_-0.120471968858658_10.0907805544629_1.10735067359583 chr11 106192520 106194492 + 1.10735067359583 NA promoter-TSS (NM_001252449) promoter-TSS (NM_001252449) 97 NM_001252448 72149 Mm.403722 NM_028126 ENSMUSG00000069631 Strada 2610019A05Rik|6030402H20Rik|AI480680|E130112C09Rik STE20-related kinase adaptor alpha protein-coding common_peak2_77_487_0.168818423231331_9.01514654917855_1.10722011422987 chr16 20516496 20517820 + 1.10722011422987 NA promoter-TSS (NM_007889) promoter-TSS (NM_007889) 94 NM_007889 13544 Mm.247259 NM_007889 ENSMUSG00000003233 Dvl3 - dishevelled segment polarity protein 3 protein-coding common_peak1_177_1405_0.10224980087801_10.5085057795115_1.10719451802182 chr10 6981974 6983150 + 1.10719451802182 NA intron (NM_001302795, intron 4 of 5) intron (NM_001302795, intron 4 of 5) -2097 NM_001170801 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding unique_peak2_16_112_-0.416642701441016_6.61185761169468_1.10711981240959-2 chr11 85323644 85324607 + 1.10711981240959 NA intron (NM_016910, intron 1 of 5) intron (NM_016910, intron 1 of 5) 12871 NM_016910 53892 Mm.45609 NM_016910 ENSMUSG00000020525 Ppm1d AV338790|Wip1 protein phosphatase 1D magnesium-dependent, delta isoform protein-coding common_peak1_16_112_-0.416642701441016_6.61185761169468_1.10711981240959-3 chrX 70364631 70365018 + 1.10711981240959 NA exon (NM_010498, exon 1 of 9) exon (NM_010498, exon 1 of 9) 261 NM_010498 15931 Mm.233083 NM_010498 ENSMUSG00000035847 Ids AW214631 iduronate 2-sulfatase protein-coding common_peak1_16_112_-0.416642701441016_6.61185761169468_1.10711981240959 chr2 118745130 118745570 + 1.10711981240959 NA promoter-TSS (NM_001301269) promoter-TSS (NM_001301269) -408 NM_001301269 100043272 Mm.398072 NM_001301269 ENSMUSG00000074918 Inafm2 5430417L22Rik|ENSMUSG00000074918 InaF motif containing 2 protein-coding common_peak1_16_112_-0.416642701441016_6.61185761169468_1.10711981240959-2 chr7 127280183 127280652 + 1.10711981240959 NA Intergenic ID_B1|SINE|B4 -6358 NM_009266 20768 Mm.20294 NM_009266 ENSMUSG00000049091 Sephs2 Sps2|Ysg3 selenophosphate synthetase 2 protein-coding unique_peak2_16_112_-0.416642701441016_6.61185761169468_1.10711981240959 chr11 83576859 83577919 + 1.10711981240959 NA intron (NM_011338, intron 1 of 3) MER74B|LTR|ERVL 1247 NM_011338 20308 Mm.416125 NM_011338 ENSMUSG00000019122 Ccl9 CCF18|MRP-2|Scya10|Scya9 chemokine (C-C motif) ligand 9 protein-coding common_peak1_18_72_0.410539644516873_6.39509438113845_1.10704415004305 chr12 116047148 116047493 + 1.10704415004305 NA promoter-TSS (NM_001004066) promoter-TSS (NM_001004066) -404 NM_001004066 56220 Mm.254997 NM_019565 ENSMUSG00000042063 Zfp386 Kzf1|mKIAA4205 zinc finger protein 386 (Kruppel-like) protein-coding common_peak1_18_72_0.410539644516873_6.39509438113845_1.10704415004305-6 chr6 122271694 122272045 + 1.10704415004305 NA intron (NM_016970, intron 4 of 4) intron (NM_016970, intron 4 of 4) 10964 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding unique_peak2_18_72_0.410539644516873_6.39509438113845_1.10704415004305 chr16 24238051 24238635 + 1.10704415004305 NA Intergenic Intergenic -155007 NM_178665 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_18_72_0.410539644516873_6.39509438113845_1.10704415004305-5 chr4 117970761 117971212 + 1.10704415004305 NA intron (NM_001285520, intron 5 of 11) intron (NM_001285520, intron 5 of 11) -41223 NM_001284192 11876 Mm.56897 NM_009711 ENSMUSG00000028539 Artn neublastin artemin protein-coding common_peak1_18_72_0.410539644516873_6.39509438113845_1.10704415004305-4 chr4 3649455 3649892 + 1.10704415004305 NA Intergenic Intergenic -6833 NR_040643 70143 Mm.417835 NR_040643 ENSMUSG00000085394 2210414B05Rik - RIKEN cDNA 2210414B05 gene ncRNA common_peak1_18_72_0.410539644516873_6.39509438113845_1.10704415004305-3 chr14 27390838 27391166 + 1.10704415004305 NA intron (NM_001289688, intron 6 of 9) intron (NM_001289688, intron 6 of 9) 29613 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_18_72_0.410539644516873_6.39509438113845_1.10704415004305-2 chr14 25533147 25533570 + 1.10704415004305 NA intron (NM_001310666, intron 2 of 23) intron (NM_001310666, intron 2 of 23) -1081 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_217_1817_0.0902180625218847_10.8732455154551_1.10701528664662 chr12 16579372 16582131 + 1.10701528664662 NA exon (NM_015763, exon 2 of 21) exon (NM_015763, exon 2 of 21) 9019 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak1_146_1290_-0.113262532243223_10.2776420191856_1.10687840499978 chr17 24414608 24415699 + 1.10687840499978 NA promoter-TSS (NR_033554) promoter-TSS (NR_033554) 478 NM_001080128 19826 Mm.1951 NM_009070 ENSMUSG00000034681 Rnps1 - ribonucleic acid binding protein S1 protein-coding common_peak2_153_1169_0.111041037488656_10.2478133332151_1.10672343384796 chr16 8636440 8638547 + 1.10672343384796 NA promoter-TSS (NM_016881) promoter-TSS (NM_016881) 208 NM_025708 66690 Mm.10068 NM_025708 ENSMUSG00000043140 Tmem186 2810440M13Rik|4432406C05Rik|AI648175|AW210586 transmembrane protein 186 protein-coding common_peak1_45_335_-0.227244307498895_8.27869526902931_1.10618274097016 chr5 30666814 30667519 + 1.10618274097016 NA intron (NR_126074, intron 1 of 4) CpG 280 NM_001302129 12615 Mm.290563 NM_007681 ENSMUSG00000029177 Cenpa Cenp-A centromere protein A protein-coding common_peak2_161_1247_0.107552175316986_10.3391783065207_1.10580594097485 chr14 55577542 55579845 + 1.10580594097485 NA intron (NM_011189, intron 1 of 10) intron (NM_011189, intron 1 of 10) 199 NM_011189 19186 Mm.830 NM_011189 ENSMUSG00000022216 Psme1 AW413925|PA28a proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) protein-coding common_peak2_178_1628_-0.100226303102749_10.6196577369741_1.10576395575137 chr11 87403605 87405440 + 1.10576395575137 NA promoter-TSS (NM_031386) promoter-TSS (NM_031386) -27 NM_053269 114714 Mm.37376 NM_053269 ENSMUSG00000007646 Rad51c R51H3|Rad51l2 RAD51 paralog C protein-coding common_peak2_88_716_-0.152810939937716_9.40942383873305_1.10568560477613 chr10 19098771 19101000 + 1.10568560477613 NA Intergenic Intergenic -41864 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_194_1578_0.0962535806259428_10.6729222461732_1.10567745284119 chr5 64377545 64383538 + 1.10567745284119 NA Intergenic Intergenic 87401 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA common_peak2_107_742_0.138213788673712_9.60632529487545_1.10534991869499 chr7 98691961 98695274 + 1.10534991869499 NA Intergenic Intergenic -9746 NM_028410 72981 Mm.4428 NM_028410 ENSMUSG00000030753 Thap12 2900052B10Rik|Dap4|Prkrir|Rpkrir THAP domain containing 12 protein-coding common_peak2_50_377_-0.214571647093615_8.45495660067427_1.10515010823865 chr18 68058205 68060271 + 1.10515010823865 NA intron (NM_172631, intron 1 of 5) intron (NM_172631, intron 1 of 5) 125981 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_53_300_0.215200201266249_8.34121977739283_1.10513938280045 chr2 79260378 79261094 + 1.10513938280045 NA intron (NM_010576, intron 2 of 27) intron (NM_010576, intron 2 of 27) 5310 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak2_412_4417_-0.0601151890479805_12.0791201088313_1.10497116626421 chr8 122471734 122476979 + 1.10497116626421 NA intron (NM_001033142, intron 1 of 5) intron (NM_001033142, intron 1 of 5) 1708 NM_001033142 68718 Mm.34356 NM_001033142 ENSMUSG00000014470 Rnf166 1110031E24Rik|AW555115|Zfp313l ring finger protein 166 protein-coding common_peak1_162_1457_-0.105930560405566_10.4568097241242_1.10462017180358 chr19 56396219 56398037 + 1.10462017180358 NA promoter-TSS (NM_007611) promoter-TSS (NM_007611) -1 NM_007611 12369 Mm.35687 NM_007611 ENSMUSG00000025076 Casp7 AI314680|CMH-1|ICE-IAP3|Mch3|caspase-7|mCASP-7 caspase 7 protein-coding common_peak2_139_1217_-0.115628081010087_10.1924843774013_1.10350791317469 chr12 113151381 113154273 + 1.10350791317469 NA intron (NM_007763, intron 1 of 4) intron (NM_007763, intron 1 of 4) 815 NM_007763 12925 Mm.272368 NM_007763 ENSMUSG00000006360 Crip1 CRHP|CRP1|Crip cysteine-rich protein 1 (intestinal) protein-coding common_peak1_43_229_0.240920002935932_7.96595005241234_1.10342451696496 chr4 88784919 88785611 + 1.10342451696496 NA 5' UTR (NM_001085532, exon 1 of 1) 5' UTR (NM_001085532, exon 1 of 1) 211 NM_001085532 545649 Mm.474424 NM_001085532 ENSMUSG00000099545 Gm13276 OTTMUSG00000011269 predicted gene 13276 protein-coding common_peak1_105_724_0.140516891727172_9.57209563076588_1.10335920972792 chrX 13041944 13042758 + 1.10335920972792 NA intron (NR_038158, intron 1 of 2) L1MDa|LINE|L1 336 NR_038158 70489 Mm.383563 NR_038158 ENSMUSG00000087424 5730405O15Rik - RIKEN cDNA 5730405O15 gene ncRNA common_peak2_62_368_0.194132153891386_8.62454308300609_1.10317602844135 chr10 93889039 93890310 + 1.10317602844135 NA exon (NM_019648, exon 2 of 12) exon (NM_019648, exon 2 of 12) 1528 NM_019648 56307 Mm.289329 NM_019648 ENSMUSG00000036112 Metap2 4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2 methionine aminopeptidase 2 protein-coding common_peak2_240_2318_-0.0834356093913549_11.1375692999503_1.10290281225952 chr12 84173755 84178858 + 1.10290281225952 NA intron (NM_001163501, intron 1 of 12) (TG)n|Simple_repeat|Simple_repeat 17709 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak1_22_155_-0.346941414768739_7.11193151147788_1.10265744846668 chr16 90727546 90727882 + 1.10265744846668 NA promoter-TSS (NM_025642) promoter-TSS (NM_025642) -343 NM_025642 66578 Mm.180363 NM_025642 ENSMUSG00000022978 Mis18a 2610039C10Rik|2810018N07Rik MIS18 kinetochore protein A protein-coding common_peak1_80_642_-0.162332844335069_9.24750850516041_1.10239972948166 chr4 137610019 137611200 + 1.10239972948166 NA intron (NM_130879, intron 6 of 27) intron (NM_130879, intron 6 of 27) 16420 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak2_42_310_-0.235043599876652_8.16324897019228_1.10238305261242 chr4 106827349 106828898 + 1.10238305261242 NA Intergenic CpG -28292 NM_025590 329910 Mm.222956 NM_025590 ENSMUSG00000034853 Acot11 1110020M10Rik|2010309H15Rik|AW060409|BFIT|BFIT1|Thea|Them1|mKIAA0707 acyl-CoA thioesterase 11 protein-coding common_peak2_48_264_0.227027687460122_8.16336239318062_1.10238305261232-2 chr7 125579607 125581209 + 1.10238305261232 NA TTS (NM_001008700) TTS (NM_001008700) -23021 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak2_48_264_0.227027687460122_8.16336239318062_1.10238305261232 chr1 74380914 74382609 + 1.10238305261232 NA exon (NM_013612, exon 9 of 15) exon (NM_013612, exon 9 of 15) 6558 NM_013612 18173 Mm.2913 NM_013612 ENSMUSG00000026177 Slc11a1 Bcg|Ity|Ity1|Lsh|Nramp|Nramp1|ity solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 protein-coding common_peak1_30_215_-0.288205297429162_7.61078485344889_1.10218705182033 chr15 11399844 11400306 + 1.10218705182033 NA promoter-TSS (NM_033074) promoter-TSS (NM_033074) -417 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding unique_peak2_30_215_-0.288205297429162_7.61078485344889_1.10218705182033 chr2 32846523 32847822 + 1.10218705182033 NA promoter-TSS (NM_001113569) promoter-TSS (NM_001113569) 60 NM_009295 20910 Mm.278865 NM_009295 ENSMUSG00000026797 Stxbp1 AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1 syntaxin binding protein 1 protein-coding common_peak2_115_976_-0.130326815083103_9.86705134442683_1.10168244477053 chr9 20520602 20522251 + 1.10168244477053 NA promoter-TSS (NM_001135019) promoter-TSS (NM_001135019) -7 NM_001082485 77519 Mm.431849 NM_001082485 ENSMUSG00000060510 Zfp266 5330440G10Rik|5730601F06Rik|AW552317 zinc finger protein 266 protein-coding common_peak1_15_105_-0.431667191438031_6.51208685884418_1.10148637837015 chr14 25466103 25466424 + 1.10148637837015 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 7078 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding unique_peak2_15_105_-0.431667191438031_6.51208685884418_1.10148637837015-2 chr6 108454758 108455558 + 1.10148637837015 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -34585 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_15_105_-0.431667191438031_6.51208685884418_1.10148637837015-2 chr6 130230424 130230897 + 1.10148637837015 NA intron (NM_014194, intron 1 of 6) intron (NM_014194, intron 1 of 6) 1027 NM_014194 16638 Mm.441781 NM_014194 ENSMUSG00000067599 Klra7 LGL-1|Ly-49G.1|Ly-49G.2|Ly-49G.3|Ly49G.4|Ly49g|Ly49g1|Ly49g2 killer cell lectin-like receptor, subfamily A, member 7 protein-coding unique_peak2_15_105_-0.431667191438031_6.51208685884418_1.10148637837015 chr1 36883083 36883861 + 1.10148637837015 NA intron (NM_018872, intron 2 of 40) ORR1B1|LTR|ERVL-MaLR 56055 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding common_peak1_141_1054_0.116744573438826_10.101399570314_1.10147789150637 chr11 20552314 20553943 + 1.10147789150637 NA intron (NM_021372, intron 1 of 1) intron (NM_021372, intron 1 of 1) 9875 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding common_peak1_26_184_-0.309173893676717_7.37679451367795_1.10132222134875-4 chrX 168672020 168672490 + 1.10132222134875 NA intron (NM_010832, intron 1 of 11) intron (NM_010832, intron 1 of 11) 1647 NM_010832 17692 Mm.24248 NM_010832 ENSMUSG00000031358 Msl3 AU018931|Msl31|Msl3l1 male-specific lethal 3 homolog (Drosophila) protein-coding common_peak1_26_184_-0.309173893676717_7.37679451367795_1.10132222134875-2 chr13 100593253 100593925 + 1.10132222134875 NA Intergenic IAPEz-int|LTR|ERVK 23355 NM_178410 218518 Mm.25300 NM_178410 ENSMUSG00000021636 Marveld2 BC003296|MARVD2|Mrvldc2|Tric|Trica|Tricb|Tricc MARVEL (membrane-associating) domain containing 2 protein-coding common_peak1_26_184_-0.309173893676717_7.37679451367795_1.10132222134875-3 chr7 143068572 143069145 + 1.10132222134875 NA promoter-TSS (NM_001115085) promoter-TSS (NM_001115085) -510 NM_020285 56844 Mm.139675 NM_020285 ENSMUSG00000045752 Tssc4 AA241958|ESTM671070 tumor-suppressing subchromosomal transferable fragment 4 protein-coding common_peak1_31_149_0.294046883815644_7.3758421324037_1.10132222134875 chr5 108660268 108660936 + 1.10132222134875 NA exon (NM_199011, exon 1 of 23) exon (NM_199011, exon 1 of 23) 167 NM_199011 110524 Mm.260921 NM_199011 ENSMUSG00000004815 Dgkq 110kDa|DAGK|DAGK7|Dagk4|Dgkd diacylglycerol kinase, theta protein-coding common_peak1_26_184_-0.309173893676717_7.37679451367795_1.10132222134875 chr11 107447606 107448158 + 1.10132222134875 NA intron (NM_145823, intron 1 of 9) B3|SINE|B2 22838 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_92_612_0.151073457196809_9.33527999228919_1.10097528453234 chr18 7692538 7694078 + 1.10097528453234 NA Intergenic CpG -66445 NM_001161620 75739 Mm.133293 NM_001081287 ENSMUSG00000057440 Mpp7 1110068J02Rik|2810038M04Rik|5430426E14Rik|AI415104|Gm955 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) protein-coding unique_peak2_11_77_-0.498239061956509_6.03628268788399_1.10096426460187-2 chr5 118028952 118029620 + 1.10096426460187 NA intron (NM_021344, intron 1 of 7) intron (NM_021344, intron 1 of 7) 1462 NM_021344 57816 Mm.273285 NM_021344 ENSMUSG00000029359 Tesc 1010001A17Rik|2410011K10Rik|TE-1 tescalcin protein-coding unique_peak2_11_77_-0.498239061956509_6.03628268788399_1.10096426460187 chr2 166786369 166787010 + 1.10096426460187 NA Intergenic CpG -7078 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding common_peak1_23_100_0.3555639853403_6.83599347542194_1.10064617548447 chr1 193329436 193329965 + 1.10064617548447 NA intron (NM_001277928, intron 10 of 22) intron (NM_001277928, intron 10 of 22) 27457 NM_001277928 16780 Mm.435441 NM_008484 ENSMUSG00000026639 Lamb3 - laminin, beta 3 protein-coding common_peak1_23_100_0.3555639853403_6.83599347542194_1.10064617548447-2 chr2 68382492 68383138 + 1.10064617548447 NA intron (NM_016866, intron 5 of 17) intron (NM_016866, intron 5 of 17) 89166 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding common_peak2_64_384_0.188199884750633_8.68281457795758_1.09976659084562 chr17 28312746 28314122 + 1.09976659084562 NA promoter-TSS (NR_028297) promoter-TSS (NR_028297) -96 NR_028297 72775 Mm.201859 NM_028348 ENSMUSG00000007570 Fance 2810451D06Rik|AI415634|AW209126 Fanconi anemia, complementation group E protein-coding common_peak2_329_3066_0.0694253944585377_11.6173251484963_1.09947989866444 chr15 79545365 79547673 + 1.09947989866444 NA promoter-TSS (NM_199079) promoter-TSS (NM_199079) 40 NM_199079 67040 Mm.29644 NM_152806 ENSMUSG00000055065 Ddx17 2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 protein-coding common_peak1_34_168_0.280566278241349_7.54116257540286_1.09932496006307 chr13 51791302 51791941 + 1.09932496006307 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 2126 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_33_238_-0.270718235820222_7.76550769007064_1.09902223528925 chr4 108350439 108350943 + 1.09902223528925 NA Intergenic MIRb|SINE|MIR 22539 NM_027250 69893 Mm.28354 NM_027250 ENSMUSG00000048351 Coa7 2010305A19Rik|AI451324|D4Ertd796e|Selrc1 cytochrome c oxidase assembly factor 7 protein-coding common_peak1_61_471_-0.189348533441178_8.78796878264125_1.09877007247397 chr19 4162751 4163753 + 1.09877007247397 NA promoter-TSS (NM_021485) promoter-TSS (NM_021485) -7 NM_021485 58988 Mm.271937 NM_021485 ENSMUSG00000024830 Rps6kb2 70kDa|S6K2 ribosomal protein S6 kinase, polypeptide 2 protein-coding common_peak2_110_769_0.135203531782432_9.65631640147348_1.09852486390611 chr18 5591869 5593903 + 1.09852486390611 NA promoter-TSS (NR_033552) promoter-TSS (NR_033552) -449 NR_033552 791318 Mm.84339 NR_033552 ENSMUSG00000063087 Gm10125 ENSMUSG00000063087|Zeb1os predicted gene 10125 ncRNA common_peak1_150_1330_-0.10977447092634_10.3234076204487_1.09838716099112 chr1 171328338 171330078 + 1.09838716099112 NA promoter-TSS (NM_001128609) promoter-TSS (NM_001128609) 63 NM_011615 21945 Mm.270139 NM_011615 ENSMUSG00000013973 Dedd CASP8IP1|DEFT|Dedpro1|FLDED1|KE05 death effector domain-containing protein-coding common_peak2_150_1330_-0.10977447092634_10.3234076204487_1.09838716099112 chr16 44355727 44358947 + 1.09838716099112 NA intron (NM_144550, intron 3 of 17) intron (NM_144550, intron 3 of 17) 9936 NM_144550 212514 Mm.24035 NM_144550 ENSMUSG00000043065 Spice1 Ccdc52|D16Ertd480e spindle and centriole associated protein 1 protein-coding common_peak1_117_832_0.129966030862633_9.76715570079686_1.09818030266465 chr4 108578644 108579958 + 1.09818030266465 NA promoter-TSS (NM_172697) promoter-TSS (NM_172697) 35 NM_172697 230596 Mm.157534 NM_172697 ENSMUSG00000063800 Prpf38a 2410002M20Rik PRP38 pre-mRNA processing factor 38 (yeast) domain containing A protein-coding unique_peak2_39_286_-0.247160387858555_8.04132673274641_1.09816065056378 chr7 123399159 123400769 + 1.09816065056378 NA intron (NM_025304, intron 1 of 10) intron (NM_025304, intron 1 of 10) 21982 NM_025304 30949 Mm.260527 NM_025304 ENSMUSG00000030763 Lcmt1 AL033290|LCMT-1|Lcmt leucine carboxyl methyltransferase 1 protein-coding common_peak1_86_561_0.158371510444926_9.21361207544339_1.09764662357212 chr6 47772055 47773054 + 1.09764662357212 NA Intergenic CpG -19629 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA unique_peak2_14_98_-0.447312498668262_6.40570037074548_1.09754858380422 chr4 88867827 88868417 + 1.09754858380422 NA Intergenic CpG 12079 NM_177348 230405 Mm.246593 NM_177348 ENSMUSG00000045364 Ifne Ifn-tau-1|Ifne1|Ifnt1|Infe1 interferon epsilon protein-coding common_peak1_63_488_-0.184212769454353_8.84158427022506_1.09729370900287 chr4 59287427 59288622 + 1.09729370900287 NA Intergenic GA-rich|Low_complexity|Low_complexity 27973 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_54_410_-0.201703565295768_8.5821428010338_1.09692692821374-2 chr9 120866283 120867281 + 1.09692692821374 NA Intergenic Intergenic 48468 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA common_peak1_54_410_-0.201703565295768_8.5821428010338_1.09692692821374 chr11 3408260 3409166 + 1.09692692821374 NA intron (NM_010718, intron 1 of 15) intron (NM_010718, intron 1 of 15) 525 NM_010718 16886 Mm.124176 NM_010718 ENSMUSG00000020451 Limk2 Limk-2|whe LIM motif-containing protein kinase 2 protein-coding unique_peak2_27_124_0.320780465355838_7.12617451734001_1.09690630917054 chr13 97379143 97380171 + 1.09690630917054 NA Intergenic ORR1D2|LTR|ERVL-MaLR -55313 NR_110432 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 ENSMUSG00000078952|Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA common_peak1_27_124_0.320780465355838_7.12617451734001_1.09690630917054-2 chr1 173431345 173431872 + 1.09690630917054 NA intron (NM_001013779, intron 2 of 8) intron (NM_001013779, intron 2 of 8) 11004 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_27_124_0.320780465355838_7.12617451734001_1.09690630917054 chr1 10217066 10217712 + 1.09690630917054 NA intron (NM_001102430, intron 1 of 37) intron (NM_001102430, intron 1 of 37) 15281 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak1_27_124_0.320780465355838_7.12617451734001_1.09690630917054-3 chr12 101023763 101024398 + 1.09690630917054 NA intron (NM_026681, intron 2 of 29) intron (NM_026681, intron 2 of 29) -2312 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak1_27_124_0.320780465355838_7.12617451734001_1.09690630917054-4 chr8 67494838 67495331 + 1.09690630917054 NA intron (NM_010874, intron 1 of 1) intron (NM_010874, intron 1 of 1) 136 NM_010874 17961 Mm.4695 NM_010874 ENSMUSG00000051147 Nat2 AV377607 N-acetyltransferase 2 (arylamine N-acetyltransferase) protein-coding common_peak2_27_124_0.320780465355838_7.12617451734001_1.09690630917054 chr1 194982899 194983801 + 1.09690630917054 NA Intergenic Intergenic -6391 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA unique_peak2_36_262_-0.259135338080892_7.90935132025186_1.09674358123612 chr12 69377645 69379712 + 1.09674358123612 NA Intergenic MER58C|DNA|hAT-Charlie 6528 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak2_36_262_-0.259135338080892_7.90935132025186_1.09674358123612 chr15 62105634 62107269 + 1.09674358123612 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 67194 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 plasmacytoma variant translocation 1 ncRNA common_peak1_36_262_-0.259135338080892_7.90935132025186_1.09674358123612 chr8 84639510 84640074 + 1.09674358123612 NA 3' UTR (NM_001252059, exon 46 of 46) 3' UTR (NM_001252059, exon 46 of 46) 23060 NM_010499 15936 Mm.399 NM_010499 ENSMUSG00000053560 Ier2 AI317238|Ch1|Pip92 immediate early response 2 protein-coding common_peak2_422_4187_0.0593543928017759_12.0617229233317_1.09666697384277 chr11 52096321 52100775 + 1.09666697384277 NA promoter-TSS (NM_019411) promoter-TSS (NM_019411) -276 NM_019411 19052 Mm.260288 NM_019411 ENSMUSG00000020349 Ppp2ca PP2A|R75353 protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform protein-coding common_peak1_190_1538_0.0965939896585848_10.6360745111575_1.09666169292235 chr9 41156169 41158205 + 1.09666169292235 NA intron (NM_176860, intron 1 of 13) CpG 307 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding unique_peak2_10_71_-0.536739569934716_5.90155521647495_1.0964726385705 chr11 106155668 106156212 + 1.0964726385705 NA TTS (NM_011947) TTS (NM_011947) 4202 NM_172397 67803 Mm.21687 NM_172397 ENSMUSG00000040699 Limd2 0610025L06Rik|AI413966 LIM domain containing 2 protein-coding unique_peak2_10_71_-0.536739569934716_5.90155521647495_1.0964726385705-3 chr2 160779918 160780541 + 1.0964726385705 NA exon (NM_177263, exon 3 of 4) exon (NM_177263, exon 3 of 4) 48919 NM_021280 18803 Mm.44463 NM_021280 ENSMUSG00000016933 Plcg1 AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1 phospholipase C, gamma 1 protein-coding unique_peak2_10_71_-0.536739569934716_5.90155521647495_1.0964726385705-2 chr18 47367700 47368443 + 1.0964726385705 NA intron (NM_018744, intron 1 of 18) intron (NM_018744, intron 1 of 18) 797 NM_018744 20358 Mm.40909 NM_018744 ENSMUSG00000019647 Sema6a A730020P05Rik|AI851735|Sema6A-1|Semaq|VIa sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A protein-coding common_peak1_21_147_-0.349655622934999_7.03462555416145_1.09633196078903-2 chr7 140115955 140116517 + 1.09633196078903 NA intron (NM_053119, intron 1 of 7) intron (NM_053119, intron 1 of 7) 187 NM_053119 93747 Mm.24452 NM_053119 ENSMUSG00000025465 Echs1 C80529 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial protein-coding unique_peak2_21_147_-0.349655622934999_7.03462555416145_1.09633196078903 chr3 95754008 95754957 + 1.09633196078903 NA exon (NM_001163619, exon 2 of 11) exon (NM_001163619, exon 2 of 11) 495 NM_027931 71807 Mm.271754 NM_027931 ENSMUSG00000028107 Tars2 2610024N01Rik|AI429208|Tarsl1 threonyl-tRNA synthetase 2, mitochondrial (putative) protein-coding common_peak1_21_147_-0.349655622934999_7.03462555416145_1.09633196078903 chr13 95956171 95956654 + 1.09633196078903 NA Intergenic Intergenic -64490 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding common_peak2_152_1160_0.110653036415174_10.2364787750732_1.09605824823902 chr1 131827163 131829060 + 1.09605824823902 NA promoter-TSS (NM_173865) promoter-TSS (NM_173865) 99 NM_173865 98396 Mm.389181 NM_173865 ENSMUSG00000013275 Slc41a1 AI573938|B230315F01Rik solute carrier family 41, member 1 protein-coding common_peak1_84_545_0.158884706932639_9.17219949438617_1.09577630137178 chr11 3963439 3964514 + 1.09577630137178 NA promoter-TSS (NM_022889) promoter-TSS (NM_022889) 1 NM_022889 64934 Mm.28659 NM_022889 ENSMUSG00000020430 Pes1 - pescadillo ribosomal biogenesis factor 1 protein-coding common_peak1_13_91_-0.463609517225443_6.29175719744429_1.09572805394914-2 chr19 53183637 53184025 + 1.09572805394914 NA intron (NM_013758, intron 1 of 15) intron (NM_013758, intron 1 of 15) 39834 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding unique_peak2_13_91_-0.463609517225443_6.29175719744429_1.09572805394914 chr18 4292128 4292850 + 1.09572805394914 NA Intergenic Intergenic 60464 NM_007746 26410 Mm.3275 NM_007746 ENSMUSG00000024235 Map3k8 Cot|Cot/Tpl2|Est|Estf|Tpl-2|Tpl2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding common_peak1_13_91_-0.463609517225443_6.29175719744429_1.09572805394914 chr17 30519392 30519731 + 1.09572805394914 NA intron (NM_172618, intron 4 of 11) intron (NM_172618, intron 4 of 11) 56726 NM_172618 224671 Mm.41220 NM_027060 ENSMUSG00000062202 Btbd9 1700023F20Rik|4930402L05|AI464421 BTB (POZ) domain containing 9 protein-coding common_peak2_17_67_0.417222520622328_6.2960741015615_1.09572805394911 chrX 150485592 150486227 + 1.09572805394911 NA Intergenic MMVL30-int|LTR|ERV1 -26759 NM_001164683 382245 Mm.277309 NM_001164683 ENSMUSG00000041353 Tmem29 2700081K05Rik|6330540D07Rik|CXorf44-like transmembrane protein 29 protein-coding common_peak1_17_67_0.417222520622328_6.2960741015615_1.09572805394911-4 chr4 135973259 135973635 + 1.09572805394911 NA promoter-TSS (NM_011942) promoter-TSS (NM_011942) -853 NM_011942 26394 Mm.34302 NM_011942 ENSMUSG00000028670 Lypla2 LysoII lysophospholipase 2 protein-coding common_peak1_17_67_0.417222520622328_6.2960741015615_1.09572805394911-2 chr15 100670551 100671007 + 1.09572805394911 NA Intergenic Intergenic -1279 NM_001270537 668218 Mm.451225 NM_001270537 ENSMUSG00000098112 Bin2 - bridging integrator 2 protein-coding common_peak1_17_67_0.417222520622328_6.2960741015615_1.09572805394911-3 chr15 102152663 102153122 + 1.09572805394911 NA intron (NM_146064, intron 2 of 14) intron (NM_146064, intron 2 of 14) 2317 NM_146064 223920 Mm.358862 NM_146064 ENSMUSG00000023045 Soat2 ACAT2|D15Wsu97e sterol O-acyltransferase 2 protein-coding common_peak1_17_67_0.417222520622328_6.2960741015615_1.09572805394911 chr10 82987219 82987679 + 1.09572805394911 NA intron (NM_021439, intron 1 of 2) intron (NM_021439, intron 1 of 2) 1952 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak1_82_528_0.162381957054322_9.12831489064119_1.09560122654091 chr8 126854878 126856002 + 1.09560122654091 NA Intergenic B3|SINE|B2 90481 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak2_45_243_0.234335777716979_8.04790522642138_1.09514565620153 chr13 113226260 113227780 + 1.09514565620153 NA Intergenic MTEa|LTR|ERVL-MaLR 17361 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding common_peak2_45_243_0.234335777716979_8.04790522642138_1.09514565620153-2 chr3 149326125 149327501 + 1.09514565620153 NA Intergenic Intergenic 52076 NR_040591 381482 Mm.393866 NR_040591 Gm1653 - predicted gene 1653 ncRNA common_peak2_274_2712_-0.0762767270176301_11.3675349687731_1.09497241232975 chr6 120912916 120917955 + 1.09497241232975 NA intron (NM_007544, intron 1 of 5) intron (NM_007544, intron 1 of 5) 1385 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding common_peak2_123_1055_-0.124487292251436_9.98215047323274_1.09475756376993 chrX 107087212 107091037 + 1.09475756376993 NA promoter-TSS (NM_172435) promoter-TSS (NM_172435) -211 NM_172435 78826 Mm.74639 NM_172435 ENSMUSG00000050921 P2ry10 5830408N17Rik|Lypsr2|P2Y10 purinergic receptor P2Y, G-protein coupled 10 protein-coding common_peak1_44_326_-0.226968187933451_8.23966273153136_1.09468604311069 chr3 152191660 152192624 + 1.09468604311069 NA intron (NM_027287, intron 2 of 3) intron (NM_027287, intron 2 of 3) 1703 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding common_peak1_44_326_-0.226968187933451_8.23966273153136_1.09468604311069-2 chr5 23850491 23851203 + 1.09468604311069 NA intron (NR_045040, intron 1 of 3) CpG 250 NR_045040 67194 Mm.423733 NR_045040 ENSMUSG00000097180 2700038G22Rik - RIKEN cDNA 2700038G22 gene ncRNA common_peak2_50_279_0.218387760182489_8.23847689703621_1.09468604311059 chr16 92300743 92301875 + 1.09468604311059 NA promoter-TSS (NM_138743) promoter-TSS (NM_138743) 6 NM_138743 68936 Mm.21698 NM_138743 ENSMUSG00000051989 Smim11 1190017O12Rik|C21orf51|Fam165b|Smim11a small integral membrane protein 11 protein-coding common_peak1_74_463_0.172168713162094_8.94406535170862_1.0943497072118 chr4 155868874 155870312 + 1.0943497072118 NA promoter-TSS (NM_028020) promoter-TSS (NM_028020) 26 NM_028020 71957 Mm.475640 NM_028020 ENSMUSG00000029034 Cpsf3l 2410006F12Rik|AU044035 cleavage and polyadenylation specific factor 3-like protein-coding common_peak2_100_829_-0.14011933262883_9.62690785991987_1.09415600764437 chr15 12210782 12214715 + 1.09415600764437 NA intron (NM_172958, intron 1 of 15) PB1D9|SINE|Alu 7654 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding common_peak2_106_733_0.13933416651256_9.58930333609949_1.09397996658708 chr6 118418833 118420466 + 1.09397996658708 NA promoter-TSS (NM_194339) promoter-TSS (NM_194339) -232 NM_194339 213895 Mm.25269 NM_194339 ENSMUSG00000030138 Bms1 AA408648|AU020092|AU043373|BB007109|BC030906|Bms1l|mKIAA0187 BMS1, ribosome biogenesis factor protein-coding common_peak1_85_687_-0.153925273261793_9.3493021180712_1.09361256699746 chr13 74349601 74350528 + 1.09361256699746 NA promoter-TSS (NM_001168658) promoter-TSS (NM_001168658) 176 NM_023281 66945 Mm.158231 NM_023281 ENSMUSG00000021577 Sdha 1500032O14Rik|2310034D06Rik|4921513A11|C81073|FP|SDH2|SDHF succinate dehydrogenase complex, subunit A, flavoprotein (Fp) protein-coding common_peak2_221_2101_-0.0870164754111258_10.9940387162566_1.09330973736055 chr18 35770660 35773032 + 1.09330973736055 NA 5' UTR (NM_019912, exon 1 of 7) 5' UTR (NM_019912, exon 1 of 7) 287 NM_019912 56550 Mm.180052 NM_019912 ENSMUSG00000091896 Ube2d2a 1500034D03Rik|Ubc2e|Ube2d2|ubc4 ubiquitin-conjugating enzyme E2D 2A protein-coding common_peak2_120_859_0.128373995045989_9.81237984711245_1.09323945127277 chr12 84284610 84286300 + 1.09323945127277 NA 5' UTR (NM_029880, exon 1 of 10) 5' UTR (NM_029880, exon 1 of 10) 159 NM_001252626 77219 Mm.246127 NM_029880 ENSMUSG00000072946 Ptgr2 1810016I24Rik|9130222H03Rik|9630002F03Rik|AI838763|B830026H24Rik|PGR-2|PRG-2|Zadh1 prostaglandin reductase 2 protein-coding common_peak1_49_368_-0.214849502737655_8.42005225469157_1.09308507322762 chr15 86173953 86174886 + 1.09308507322762 NA intron (NM_145475, intron 1 of 12) intron (NM_145475, intron 1 of 12) 11722 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding common_peak2_220_1850_0.0884519961784314_10.8983151779598_1.09307811381342 chr3 127552154 127554155 + 1.09307811381342 NA promoter-TSS (NM_197997) promoter-TSS (NM_197997) 195 NM_138593 28036 Mm.291032 NM_138593 ENSMUSG00000027968 Larp7 C330027G06Rik|D3Wsu161e La ribonucleoprotein domain family, member 7 protein-coding common_peak1_83_669_-0.157318019173925_9.30935827575817_1.09202933517478 chr7 128130736 128131883 + 1.09202933517478 NA intron (NM_021334, intron 4 of 29) intron (NM_021334, intron 4 of 29) 1741 NM_021334 16411 Mm.22378 NM_021334 ENSMUSG00000030789 Itgax AI449405|Cd11c|Cr4|N418 integrin alpha X protein-coding common_peak1_81_650_-0.158458156913852_9.26728465470871_1.09199044917653 chr2 26020868 26021847 + 1.09199044917653 NA intron (NM_133835, intron 1 of 9) intron (NM_133835, intron 1 of 9) 403 NM_133835 98766 Mm.247824 NM_133835 ENSMUSG00000036352 Ubac1 1110033G07Rik|AA407978|GBDR1|Gdbr1|Kpc2|Ubadc1 ubiquitin associated domain containing 1 protein-coding common_peak2_81_650_-0.158458156913852_9.26728465470871_1.09199044917653 chr2 102400026 102401885 + 1.09199044917653 NA promoter-TSS (NM_020267) promoter-TSS (NM_020267) -55 NM_020267 80985 Mm.315002 NM_020267 ENSMUSG00000027189 Trim44 Dipb|Mc7 tripartite motif-containing 44 protein-coding common_peak2_98_810_-0.142103640403109_9.59250628401572_1.091925404586 chr1 82839105 82840550 + 1.091925404586 NA exon (NM_010472, exon 1 of 13) exon (NM_010472, exon 1 of 13) 367 NM_010472 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding common_peak2_95_638_0.147327969517812_9.3933361057059_1.09189301864915 chr7 141474567 141475918 + 1.09189301864915 NA promoter-TSS (NM_025593) promoter-TSS (NM_025593) 6 NM_053082 64540 Mm.489619 NM_053082 ENSMUSG00000025511 Tspan4 AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4 tetraspanin 4 protein-coding common_peak2_125_905_0.124854231091904_9.88579435559219_1.0915249873993 chr7 16815785 16817329 + 1.0915249873993 NA exon (NM_133789, exon 1 of 18) exon (NM_133789, exon 1 of 18) 175 NM_173430 243853 Mm.39703 NM_173430 ENSMUSG00000048920 Fkrp A830029B19Rik|AI842067|AI847300|LGMD1I|MDC1C fukutin related protein protein-coding common_peak1_159_1424_-0.105775042749622_10.4238586825647_1.09140551306457 chr2 29964879 29966403 + 1.09140551306457 NA promoter-TSS (NM_001177667) promoter-TSS (NM_001177667) 81 NM_001309460 20740 Mm.204969 NM_001076554 ENSMUSG00000057738 Sptan1 2610027H02Rik|Spna-2|Spna2 spectrin alpha, non-erythrocytic 1 protein-coding common_peak2_52_293_0.216069420606749_8.30770705513974_1.09091374980551 chr8 54076922 54078197 + 1.09091374980551 NA promoter-TSS (NM_009506) promoter-TSS (NM_009506) 27 NM_009506 22341 Mm.1402 NM_009506 ENSMUSG00000031520 Vegfc AW228853|VEGF-C vascular endothelial growth factor C protein-coding common_peak2_59_346_0.196476891205799_8.53703029818116_1.09087559116066 chr8 121828779 121830425 + 1.09087559116066 NA promoter-TSS (NM_145605) promoter-TSS (NM_145605) -33 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding common_peak2_29_207_-0.291783285543389_7.5545480753694_1.09082747728945 chr18 62719284 62720744 + 1.09082747728945 NA intron (NM_001168423, intron 1 of 4) intron (NM_001168423, intron 1 of 4) 21373 NM_001168423 100038417 Mm.387557 NM_001168423 ENSMUSG00000073551 Spink13 ENSMUSG00000073551|Gm10534|Spink5l3 serine peptidase inhibitor, Kazal type 13 protein-coding unique_peak2_29_207_-0.291783285543389_7.5545480753694_1.09082747728945-3 chr4 130936555 130938419 + 1.09082747728945 NA Intergenic Intergenic -6898 NM_010769 17180 Mm.271796 NM_010769 ENSMUSG00000040533 Matn1 CMP|Crtm|Mat1|matrilin-1 matrilin 1, cartilage matrix protein protein-coding unique_peak2_29_207_-0.291783285543389_7.5545480753694_1.09082747728945-2 chr2 119028601 119029596 + 1.09082747728945 NA intron (NM_199310, intron 1 of 3) intron (NM_199310, intron 1 of 3) 295 NM_199310 269336 Mm.292465 NM_199310 ENSMUSG00000039983 Ccdc32 Gm631 coiled-coil domain containing 32 protein-coding unique_peak2_29_207_-0.291783285543389_7.5545480753694_1.09082747728945 chr13 111724846 111726230 + 1.09082747728945 NA Intergenic CpG 39360 NM_172593 218613 Mm.31012 NM_172593 ENSMUSG00000032727 Mier3 5730509D14|AU015422|D130064H19Rik MIER family member 3 protein-coding common_peak1_29_207_-0.291783285543389_7.5545480753694_1.09082747728945 chrX 13282204 13282727 + 1.09082747728945 NA intron (NM_010028, intron 1 of 16) intron (NM_010028, intron 1 of 16) 1443 NM_010028 13205 Mm.289662 NM_010028 ENSMUSG00000000787 Ddx3x D1Pas1-rs2|Ddx3|Fin14 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked protein-coding common_peak2_135_998_0.119032326740824_10.0238570311628_1.09030779761358 chr6 120487979 120490497 + 1.09030779761358 NA 3' UTR (NM_033567, exon 1 of 1) 3' UTR (NM_033567, exon 1 of 1) 4569 NM_033567 94047 Mm.23088 NM_033567 ENSMUSG00000094626 Cecr6 AW048664 cat eye syndrome chromosome region, candidate 6 protein-coding common_peak1_77_614_-0.164886839432384_9.18199918051041_1.09030370746543 chr5 115528533 115529752 + 1.09030370746543 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 22466 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak2_141_1237_-0.114023742180891_10.2167837281238_1.0900196326196 chr17 8310340 8312327 + 1.0900196326196 NA promoter-TSS (NR_073374) promoter-TSS (NR_073374) -215 NR_073374 75060 Mm.426530 NR_073374 ENSMUSG00000087478 4930506C21Rik - RIKEN cDNA 4930506C21 gene ncRNA common_peak1_258_2261_0.0799365464870618_11.1833514872334_1.08999520575609 chr1 43097780 43099364 + 1.08999520575609 NA promoter-TSS (NM_133818) promoter-TSS (NM_133818) 50 NM_001013025 73122 Mm.246069 NM_001013025 ENSMUSG00000070939 Tgfbrap1 3110018K12Rik|AU024090|AU042859|AW742551|Trap1 transforming growth factor, beta receptor associated protein 1 protein-coding common_peak2_268_2372_0.0778627363750601_11.2514277533815_1.08872607796494 chr18 39008148 39012941 + 1.08872607796494 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 17399 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak2_148_1121_0.113068041498828_10.1883909813582_1.08869515588841 chr4 26345242 26347530 + 1.08869515588841 NA intron (NM_172865, intron 1 of 4) intron (NM_172865, intron 1 of 4) 266 NM_172865 242362 Mm.245602 NM_172865 ENSMUSG00000040520 Manea 4932703L02Rik mannosidase, endo-alpha protein-coding common_peak1_212_1766_0.0902077374486847_10.832190193276_1.08859466768284 chr3 103789960 103791913 + 1.08859466768284 NA intron (NM_001301304, intron 1 of 15) CpG 339 NM_001301306 15257 Mm.20827 NM_010432 ENSMUSG00000008730 Hipk1 1110062K04Rik|Myak homeodomain interacting protein kinase 1 protein-coding common_peak2_209_1735_0.0906413094186966_10.8068718871538_1.08856392536924 chr16 44171864 44174406 + 1.08856392536924 NA promoter-TSS (NM_001029889) promoter-TSS (NM_001029889) -262 NM_001029889 207806 Mm.310566 NM_001029889 ENSMUSG00000068284 Usf3 5530400K22Rik|Gm1779|Gm608|mKIAA2018 upstream transcription factor family member 3 protein-coding common_peak1_41_302_-0.239087028488097_8.1236304692289_1.08850643252125 chr16 20651185 20652220 + 1.08850643252125 NA promoter-TSS (NR_027485) promoter-TSS (NR_027485) 50 NM_134101 21762 Mm.243234 NM_134101 ENSMUSG00000006998 Psmd2 9430095H01Rik|AA407121|TEG-190|Tex190 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 protein-coding common_peak2_41_302_-0.239087028488097_8.1236304692289_1.08850643252125 chr16 52181158 52182624 + 1.08850643252125 NA intron (NM_001033238, intron 13 of 17) (CA)n|Simple_repeat|Simple_repeat 150342 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak2_47_257_0.229160523855198_8.12580751735085_1.08850643252115 chr13 14629631 14630857 + 1.08850643252115 NA promoter-TSS (NM_134067) promoter-TSS (NM_134067) -1 NM_001104646 105351 Mm.41450 NM_134067 ENSMUSG00000039182 AW209491 - expressed sequence AW209491 protein-coding common_peak1_94_772_-0.145854813649636_9.52139719710003_1.0880137406029 chr19 5023122 5024324 + 1.0880137406029 NA promoter-TSS (NM_007854) promoter-TSS (NM_007854) -283 NM_007854 13340 Mm.4930 NM_007854 ENSMUSG00000024891 Slc29a2 Der12|Ent2|Hnp36 solute carrier family 29 (nucleoside transporters), member 2 protein-coding common_peak2_128_933_0.122582946697571_9.92857021305845_1.08701212143232 chr6 124711447 124713310 + 1.08701212143232 NA promoter-TSS (NM_013536) promoter-TSS (NM_013536) 89 NM_007531 12034 Mm.36241 NM_007531 ENSMUSG00000004264 Phb2 AU044498|BAP|Bap37|Bcap37|REA prohibitin 2 protein-coding common_peak2_25_177_-0.320312186325466_7.31557733780367_1.08695704931167 chr9 21411724 21412645 + 1.08695704931167 NA promoter-TSS (NR_045742) promoter-TSS (NR_045742) 347 NM_021888 60507 Mm.436579 NM_021888 ENSMUSG00000002825 Qtrt1 2610028E17Rik|Tgt queuine tRNA-ribosyltransferase 1 protein-coding common_peak1_30_143_0.296757203291994_7.31830360308831_1.08695704931167 chr18 67729045 67729686 + 1.08695704931167 NA Intergenic Intergenic -4744 NM_008977 19255 Mm.260433 NM_008977 ENSMUSG00000024539 Ptpn2 AI325124|Ptpt|TC-PTP protein tyrosine phosphatase, non-receptor type 2 protein-coding common_peak1_25_177_-0.320312186325466_7.31557733780367_1.08695704931167 chr13 95893128 95893720 + 1.08695704931167 NA Intergenic Intergenic -1502 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding unique_peak2_25_177_-0.320312186325466_7.31557733780367_1.08695704931167 chr6 72511948 72513250 + 1.08695704931167 NA Intergenic Intergenic -31792 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_30_143_0.296757203291994_7.31830360308831_1.08695704931167 chr8 41374041 41374777 + 1.08695704931167 NA intron (NM_019734, intron 1 of 13) CpG 288 NM_019734 11886 Mm.22547 NM_019734 ENSMUSG00000031591 Asah1 2310081N20Rik|AC|Asah N-acylsphingosine amidohydrolase 1 protein-coding common_peak1_60_462_-0.190348932213263_8.75969391715361_1.08610711807521 chr11 80208880 80209731 + 1.08610711807521 NA exon (NM_001163355, exon 1 of 20) exon (NM_001163355, exon 1 of 20) 250 NM_021536 59040 Mm.489674 NM_021536 ENSMUSG00000017686 Rhot1 2210403N23Rik|AA415293|AF244542|AI834919|Arht1|C430039G08Rik|Miro1 ras homolog family member T1 protein-coding common_peak1_168_1519_-0.102041759801537_10.5188347284302_1.08610262796814 chr12 76361685 76364043 + 1.08610262796814 NA intron (NM_028356, intron 1 of 2) intron (NM_028356, intron 1 of 2) 6600 NM_001172104 109929 Mm.41880 NM_028356 ENSMUSG00000056459 Zbtb25 2810462M08Rik|2900064P18Rik|AI842128|Kup|Zfp-50|Zfp50 zinc finger and BTB domain containing 25 protein-coding common_peak1_46_343_-0.22313366727608_8.31469792106406_1.08595209341078-2 chr16 30066112 30066898 + 1.08595209341078 NA intron (NM_008235, intron 3 of 3) CpG 1148 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hairy and enhancer of split 1 (Drosophila) protein-coding common_peak1_46_343_-0.22313366727608_8.31469792106406_1.08595209341078 chr11 30648974 30649670 + 1.08595209341078 NA promoter-TSS (NM_029344) promoter-TSS (NM_029344) 74 NM_029344 75572 Mm.390319 NM_029344 ENSMUSG00000060923 Acyp2 2310004B09Rik acylphosphatase 2, muscle type protein-coding common_peak1_54_308_0.209827990481541_8.37637702314515_1.08575681983667 chr13 52993859 52994826 + 1.08575681983667 NA Intergenic Intergenic -13303 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_87_570_0.15567542970382_9.23518465021475_1.08574484035252 chr2 4651460 4652375 + 1.08574484035252 NA exon (NM_026045, exon 1 of 10) exon (NM_026045, exon 1 of 10) 169 NM_026045 67229 Mm.38529 NM_026045 ENSMUSG00000039449 Prpf18 2810441A10Rik pre-mRNA processing factor 18 protein-coding common_peak1_90_734_-0.14925539700368_9.44697274122189_1.08493190749343 chr3 37312284 37313486 + 1.08493190749343 NA promoter-TSS (NM_145825) promoter-TSS (NM_145825) 331 NM_001255992 241950 Mm.32171 NM_001008502 ENSMUSG00000051444 Bbs12 Gm1805|Gm407|Gm721 Bardet-Biedl syndrome 12 (human) protein-coding common_peak2_385_3734_0.0625250759560139_11.8981550656546_1.08491537875639 chr5 142925621 142933145 + 1.08491537875639 NA Intergenic CpG -22629 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak2_85_553_0.158597315391116_9.19304082374475_1.08490600483482 chr11 35837676 35839137 + 1.08490600483482 NA TTS (NM_170779) TTS (NM_170779) -3878 NM_025936 104458 Mm.284906 NM_025936 ENSMUSG00000018848 Rars 2610011N19Rik|2610037E21Rik|AL033339|AW985894 arginyl-tRNA synthetase protein-coding common_peak1_85_553_0.158597315391116_9.19304082374475_1.08490600483482 chr4 32334931 32335813 + 1.08490600483482 NA Intergenic Intergenic -82063 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_20_140_-0.362076708600296_6.95851299809865_1.084647106008-2 chr5 64491424 64491899 + 1.084647106008 NA Intergenic Intergenic 14653 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA common_peak1_20_140_-0.362076708600296_6.95851299809865_1.084647106008 chr1 106616138 106616615 + 1.084647106008 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -69745 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_20_140_-0.362076708600296_6.95851299809865_1.084647106008-3 chr6 97213501 97214010 + 1.084647106008 NA intron (NM_022992, intron 1 of 2) intron (NM_022992, intron 1 of 2) 2963 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak1_53_401_-0.202231813152977_8.54993578460244_1.08454662932171 chr18 36700349 36701270 + 1.08454662932171 NA Intergenic MER4B-int|LTR|ERV1 -4884 NM_172831 240216 Mm.252323 NM_172831 ENSMUSG00000044719 E230025N22Rik EG240216 Riken cDNA E230025N22 gene protein-coding common_peak2_26_118_0.327389803531651_7.05851266507377_1.084362909157 chr11 88993818 88994471 + 1.084362909157 NA Intergenic RLTR9D2|LTR|ERVK -5259 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding unique_peak2_26_118_0.327389803531651_7.05851266507377_1.084362909157 chr4 128883507 128884480 + 1.084362909157 NA promoter-TSS (NM_178110) promoter-TSS (NM_178110) -147 NM_178110 67525 Mm.30653 NM_178110 ENSMUSG00000041000 Trim62 6330414G21Rik|AI450348|Dear1 tripartite motif-containing 62 protein-coding unique_peak2_22_95_0.353498303372354_6.76171165240733_1.08412465409449 chr12 21142758 21143547 + 1.08412465409449 NA intron (NM_001135192, intron 1 of 28) intron (NM_001135192, intron 1 of 28) 31396 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding common_peak2_22_95_0.353498303372354_6.76171165240733_1.08412465409449 chr19 47854965 47855646 + 1.08412465409449 NA exon (NM_010362, exon 2 of 6) exon (NM_010362, exon 2 of 6) 316 NM_010362 14873 Mm.378931 NM_010362 ENSMUSG00000025068 Gsto1 AA407097|AI194287|AU018802|Gsto-1|Gstx|Spg-r|p28 glutathione S-transferase omega 1 protein-coding common_peak1_22_95_0.353498303372354_6.76171165240733_1.08412465409449-3 chr8 46852636 46853091 + 1.08412465409449 NA Intergenic LTR67B|LTR|ERVL 113118 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding unique_peak2_22_95_0.353498303372354_6.76171165240733_1.08412465409449-2 chr9 61645606 61646336 + 1.08412465409449 NA Intergenic Intergenic 268539 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_22_95_0.353498303372354_6.76171165240733_1.08412465409449-2 chr5 139344770 139345289 + 1.08412465409449 NA intron (NM_197980, intron 1 of 2) CpG 137 NM_197980 68033 Mm.261064 NM_197980 ENSMUSG00000045438 Cox19 1810074D02Rik|2810437L13Rik cytochrome c oxidase assembly protein 19 protein-coding common_peak1_22_95_0.353498303372354_6.76171165240733_1.08412465409449 chr2 32916982 32917535 + 1.08412465409449 NA intron (NM_146119, intron 5 of 13) intron (NM_146119, intron 5 of 13) 41124 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_33_162_0.28142041792945_7.4894383631958_1.08406818616317-3 chr3 59133088 59133706 + 1.08406818616317 NA promoter-TSS (NM_001287120) promoter-TSS (NM_001287120) -935 NM_001287120 140795 Mm.439021 NM_133200 ENSMUSG00000036381 P2ry14 A330108O13Rik|Gpr105|P2Y14 purinergic receptor P2Y, G-protein coupled, 14 protein-coding common_peak1_33_162_0.28142041792945_7.4894383631958_1.08406818616317 chr11 67580606 67581324 + 1.08406818616317 NA intron (NM_008088, intron 1 of 13) (TTTTG)n|Simple_repeat|Simple_repeat -5535 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_33_162_0.28142041792945_7.4894383631958_1.08406818616317 chr14 102809202 102810723 + 1.08406818616317 NA Intergenic Intergenic 172670 NR_039592 100628599 NR_039592 ENSMUSG00000092901 Mir5130 mir-5130|mmu-mir-5130|mu-mir-5130 microRNA 5130 ncRNA common_peak1_33_162_0.28142041792945_7.4894383631958_1.08406818616317-2 chr12 69417543 69418257 + 1.08406818616317 NA Intergenic Intergenic 45750 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak2_107_743_0.136273378104276_9.60729550016017_1.08381257395471 chr2 35131438 35133133 + 1.08381257395471 NA promoter-TSS (NM_001290635) promoter-TSS (NM_001290635) 51 NM_001290635 26920 Mm.231332 NM_012018 ENSMUSG00000057110 Cntrl 6720467O09Rik|AA968343|Cep1|Cep110|IB3/5|Ma2a8|b2b1468.1Clo|b2b1468Clo centriolin protein-coding common_peak2_98_664_0.144243933425612_9.44933249710136_1.08381028275328 chr2 90489099 90491908 + 1.08381028275328 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -11329 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_108_906_-0.133216504998886_9.75835048802908_1.08330679327351 chr8 111643231 111644503 + 1.08330679327351 NA intron (NM_011742, intron 1 of 3) CpG 424 NM_011742 22640 Mm.4184 NM_011742 ENSMUSG00000055835 Zfp1 Fnp-1|Zfp-1|mkr-1 zinc finger protein 1 protein-coding common_peak2_83_537_0.159236903614588_9.15108081436392_1.08301993238112 chr2 165194799 165196973 + 1.08301993238112 NA intron (NM_174988, intron 1 of 11) intron (NM_174988, intron 1 of 11) 38851 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak1_83_537_0.159236903614588_9.15108081436392_1.08301993238112 chr2 131508406 131509942 + 1.08301993238112 NA intron (NM_145533, intron 1 of 6) intron (NM_145533, intron 1 of 6) 17312 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak2_99_819_-0.14024028499635_9.60935995700727_1.08281016239378 chr17 35172333 35174588 + 1.08281016239378 NA intron (NM_019467, intron 1 of 7) intron (NM_019467, intron 1 of 7) 2541 NM_019467 11629 Mm.10747 NM_019467 ENSMUSG00000024397 Aif1 AI607846|AIF-1|D17H6S50E|G1|Iba1 allograft inflammatory factor 1 protein-coding common_peak2_36_182_0.264083812927367_7.64774174474773_1.08219730679643 chr5 65198811 65199619 + 1.08219730679643 NA promoter-TSS (NM_153391) promoter-TSS (NM_153391) -481 NM_153391 213081 Mm.127550 NM_153391 ENSMUSG00000037890 Wdr19 C330027H04Rik|D330023L08Rik|DYF2|Ift144|PWDMP|mKIAA1638 WD repeat domain 19 protein-coding common_peak1_36_182_0.264083812927367_7.64774174474773_1.08219730679643-2 chr7 80918235 80918930 + 1.08219730679643 NA intron (NM_019951, intron 4 of 5) B1_Mus2|SINE|Alu -13520 NM_001291280 68039 Mm.22246 NM_026523 ENSMUSG00000025723 Nmb 3110023K12Rik neuromedin B protein-coding common_peak1_36_182_0.264083812927367_7.64774174474773_1.08219730679643 chr13 68581467 68582202 + 1.08219730679643 NA promoter-TSS (NM_027123) promoter-TSS (NM_027123) 270 NM_001308475 210009 Mm.205514 NM_172480 ENSMUSG00000034617 Mtrr 4732420G08|MSR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding common_peak2_71_439_0.176550270720719_8.86963484888502_1.08196110504162 chr11 55130712 55133064 + 1.08196110504162 NA intron (NM_172258, intron 7 of 10) ID_B1|SINE|B4 19818 NM_172258 215332 Mm.87054 NM_172258 ENSMUSG00000049491 Slc36a3 PAT3|TRAMD2|tramdorin2 solute carrier family 36 (proton/amino acid symporter), member 3 protein-coding common_peak1_56_323_0.204648716665549_8.4421743612174_1.08168518643043 chr9 70257614 70258300 + 1.08168518643043 NA intron (NM_181072, intron 1 of 27) MER90a|LTR|ERV1 50607 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_66_514_-0.177884921920857_8.91948616111015_1.0815844744281 chr18 74268282 74268993 + 1.0815844744281 NA intron (NM_013594, intron 1 of 14) intron (NM_013594, intron 1 of 14) 349 NM_013594 17190 Mm.22522 NM_013594 ENSMUSG00000024561 Mbd1 Cxxc3|PCM1 methyl-CpG binding domain protein 1 protein-coding common_peak2_66_514_-0.177884921920857_8.91948616111015_1.0815844744281 chr9 118069753 118071704 + 1.0815844744281 NA TTS (NM_001286507) TTS (NM_001286507) 30206 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_73_455_0.173505948233025_8.91964298828125_1.0815844744281 chr3 133077638 133079405 + 1.0815844744281 NA intron (NM_026231, intron 3 of 11) intron (NM_026231, intron 3 of 11) 13219 NM_026231 67553 Mm.304899 NM_026231 ENSMUSG00000028018 Gstcd 4933434L15Rik glutathione S-transferase, C-terminal domain containing protein-coding common_peak2_44_236_0.237435388666372_8.00746094323144_1.08156022067969 chr3 98026889 98028350 + 1.08156022067969 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 14081 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_44_236_0.237435388666372_8.00746094323144_1.08156022067969-2 chr6 86396517 86397685 + 1.08156022067969 NA promoter-TSS (NM_025823) promoter-TSS (NM_025823) 49 NM_025823 66881 Mm.30849 NM_025823 ENSMUSG00000029998 Pcyox1 1200015P13Rik|AI115532|AI448340|PCL1|Pcly prenylcysteine oxidase 1 protein-coding common_peak2_96_647_0.145488360478785_9.41259418312402_1.08144717068887 chr11 103027709 103029222 + 1.08144717068887 NA promoter-TSS (NM_008707) promoter-TSS (NM_008707) -97 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding common_peak2_364_3482_0.0643098556772266_11.7982696854253_1.08141135516027 chr7 114289812 114294231 + 1.08141135516027 NA Intergenic Intergenic -15905 NM_011965 26440 Mm.121265 NM_011965 ENSMUSG00000030751 Psma1 C2|HC2|Pros-30|alpha-type proteasome (prosome, macropain) subunit, alpha type 1 protein-coding common_peak1_48_359_-0.214976859418989_8.38436466662018_1.08105643643477 chr18 5591880 5592530 + 1.08105643643477 NA non-coding (NR_033552, exon 1 of 7) non-coding (NR_033552, exon 1 of 7) 232 NR_033552 791318 Mm.84339 NR_033552 ENSMUSG00000063087 Gm10125 ENSMUSG00000063087|Zeb1os predicted gene 10125 ncRNA common_peak1_388_4108_-0.0614536011805775_11.9738448145774_1.08104767685135 chr10 19591155 19594655 + 1.08104767685135 NA intron (NM_010511, intron 1 of 6) L1_Rod|LINE|L1 947 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_180_1648_-0.0981683679611063_10.6382914994569_1.08076829847598 chr4 145210629 145212536 + 1.08076829847598 NA TTS (NM_011610) TTS (NM_011610) -16577 NM_001276465 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding common_peak1_49_272_0.219870362402888_8.2026923221213_1.08060662089969-2 chr19 11445033 11446136 + 1.08060662089969 NA intron (NM_021718, intron 1 of 6) intron (NM_021718, intron 1 of 6) 2026 NM_021718 60361 Mm.33957 NM_021718 ENSMUSG00000056290 Ms4a4b AI463180|Chandra|Ly116 membrane-spanning 4-domains, subfamily A, member 4B protein-coding common_peak1_49_272_0.219870362402888_8.2026923221213_1.08060662089969 chr13 91635592 91636262 + 1.08060662089969 NA intron (NM_024186, intron 4 of 15) intron (NM_024186, intron 4 of 15) -105594 NM_028790 74156 Mm.275963 NM_028790 ENSMUSG00000021620 Acot12 1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1 acyl-CoA thioesterase 12 protein-coding common_peak1_43_318_-0.231002559884562_8.20191133382259_1.08060662089969-2 chr1 171270256 171271049 + 1.08060662089969 NA intron (NM_020579, intron 1 of 7) CpG 324 NM_020579 57370 Mm.274011 NM_020579 ENSMUSG00000052423 B4galt3 9530061M23Rik|AA104562|AW125175|ESTM26|ESTM6|R74981 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 protein-coding common_peak1_43_318_-0.231002559884562_8.20191133382259_1.08060662089969 chr1 85649322 85649967 + 1.08060662089969 NA promoter-TSS (NM_001313712) promoter-TSS (NM_001313712) -344 NM_001313713 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding unique_peak2_19_132_-0.364148207870413_6.87320833156598_1.08012440664646-2 chr4 124700162 124701162 + 1.08012440664646 NA promoter-TSS (NM_010213) promoter-TSS (NM_010213) -37 NM_010213 14201 Mm.331856 NM_010213 ENSMUSG00000032643 Fhl3 SLIM2 four and a half LIM domains 3 protein-coding common_peak1_19_132_-0.364148207870413_6.87320833156598_1.08012440664646-3 chr17 34123370 34123796 + 1.08012440664646 NA promoter-TSS (NM_001204973) promoter-TSS (NM_001204973) 751 NM_010386 14998 Mm.16373 NM_010386 ENSMUSG00000037649 H2-DMa H-2Ma|H2-Ma histocompatibility 2, class II, locus DMa protein-coding unique_peak2_19_132_-0.364148207870413_6.87320833156598_1.08012440664646 chr4 116707953 116709177 + 1.08012440664646 NA promoter-TSS (NM_025962) promoter-TSS (NM_025962) -180 NM_025962 67096 Mm.252785 NM_025962 ENSMUSG00000028690 Mmachc 1810037K07Rik|CblC methylmalonic aciduria cblC type, with homocystinuria protein-coding common_peak1_19_132_-0.364148207870413_6.87320833156598_1.08012440664646-2 chr16 24911148 24911677 + 1.08012440664646 NA intron (NM_001145952, intron 9 of 11) intron (NM_001145952, intron 9 of 11) -148227 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA common_peak1_19_132_-0.364148207870413_6.87320833156598_1.08012440664646 chr11 5434636 5435015 + 1.08012440664646 NA intron (NM_001080924, intron 1 of 8) intron (NM_001080924, intron 1 of 8) 10022 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding common_peak1_205_1693_0.0919420356308986_10.7721891771476_1.07986378390651 chr8 124294367 124296884 + 1.07986378390651 NA intron (NM_139272, intron 2 of 15) intron (NM_139272, intron 2 of 15) 64231 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_28_199_-0.295192875262156_7.49625975214365_1.07972761639595-2 chr9 74958276 74958860 + 1.07972761639595 NA intron (NM_001113283, intron 2 of 12) intron (NM_001113283, intron 2 of 12) 5515 NM_001113283 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding common_peak1_28_199_-0.295192875262156_7.49625975214365_1.07972761639595 chr11 83039819 83040457 + 1.07972761639595 NA promoter-TSS (NR_073523) promoter-TSS (NR_073523) -96 NR_073523 237887 Mm.341645 NM_181542 ENSMUSG00000072621 Slfn10-ps Slfn10|mFLJ00257 schlafen 10, pseudogene pseudo common_peak1_555_6314_-0.0493576155096012_12.5998882109201_1.07964621795615 chr9 90242071 90246534 + 1.07964621795615 NA intron (NM_194334, intron 2 of 12) intron (NM_194334, intron 2 of 12) 26467 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak2_134_989_0.119028438750943_10.0107989343424_1.07936624674802 chr10 67095847 67098177 + 1.07936624674802 NA promoter-TSS (NM_001204915) promoter-TSS (NM_001204915) -24 NM_178606 28193 Mm.41272 NM_178606 ENSMUSG00000019873 Reep3 D10Ucla1 receptor accessory protein 3 protein-coding common_peak1_80_641_-0.160087404129424_9.24638578505759_1.07928521811749 chr11 71019493 71020614 + 1.07928521811749 NA promoter-TSS (NM_033562) promoter-TSS (NM_033562) -212 NM_001291146 116891 Mm.28131 NM_033562 ENSMUSG00000018442 Derl2 CGI-101|Derlin-2|F-lana|Flana Der1-like domain family, member 2 protein-coding common_peak2_70_550_-0.172748962724141_9.01953402720909_1.07915291191731 chr9 114639271 114640757 + 1.07915291191731 NA 5' UTR (NM_153585, exon 1 of 20) 5' UTR (NM_153585, exon 1 of 20) 186 NM_153585 78893 Mm.283708 NM_153585 ENSMUSG00000056167 Cnot10 2600001P13Rik CCR4-NOT transcription complex, subunit 10 protein-coding unique_peak2_74_586_-0.167066984820385_9.11368320069986_1.07859677178616 chr4 135541092 135543610 + 1.07859677178616 NA 3' UTR (NM_001013756, exon 16 of 16) 3' UTR (NM_001013756, exon 16 of 16) 31269 NM_001013756 230824 Mm.331972 NM_001013756 ENSMUSG00000037188 Grhl3 AI561912|Get1|Som|Tfcp2l4|ct grainyhead-like 3 (Drosophila) protein-coding common_peak1_24_169_-0.323375744001318_7.24770306413704_1.07787229046897-2 chr2 29644892 29645602 + 1.07787229046897 NA intron (NM_054050, intron 1 of 23) ID4_|SINE|ID 25527 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_24_169_-0.323375744001318_7.24770306413704_1.07787229046897 chr1 40531077 40531556 + 1.07787229046897 NA intron (NM_010553, intron 6 of 12) intron (NM_010553, intron 6 of 12) 15954 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak2_188_1518_0.096837521602982_10.6173249153036_1.07771027330432 chr16 78561760 78565171 + 1.07771027330432 NA intron (NR_040569, intron 2 of 2) intron (NR_040569, intron 2 of 2) 3149 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak1_57_435_-0.192908699078002_8.67172997523793_1.07757942200016 chr4 19708405 19709139 + 1.07757942200016 NA intron (NM_001276292, intron 1 of 23) CpG 232 NM_177327 107568 Mm.78312 NM_177327 ENSMUSG00000041058 Wwp1 8030445B08Rik|AIP5|SDRP1|Tiul1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding common_peak2_57_435_-0.192908699078002_8.67172997523793_1.07757942200016 chr12 92890821 92892856 + 1.07757942200016 NA Intergenic RLTR3_Mm|LTR|ERVK 552985 NR_126436 75295 Mm.243878 NR_126436 4930559C10Rik - RIKEN cDNA 4930559C10 gene ncRNA common_peak2_57_435_-0.192908699078002_8.67172997523793_1.07757942200016-2 chr14 73118162 73120375 + 1.07757942200016 NA Intergenic Intergenic -23242 NM_001170694 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak2_40_293_-0.238229079770938_8.08055780495089_1.07752453232847 chr2 30358563 30359549 + 1.07752453232847 NA intron (NM_139302, intron 1 of 10) intron (NM_139302, intron 1 of 10) 260 NM_139302 227700 Mm.33343 NM_139302 ENSMUSG00000026860 Sh3glb2 SPAS-1 SH3-domain GRB2-like endophilin B2 protein-coding common_peak2_40_293_-0.238229079770938_8.08055780495089_1.07752453232847-2 chr2 167537058 167538300 + 1.07752453232847 NA promoter-TSS (NM_011427) promoter-TSS (NM_011427) -548 NM_011427 20613 Mm.2093 NM_011427 ENSMUSG00000042821 Snai1 Sna|Sna1|Snail|Snail1 snail family zinc finger 1 protein-coding common_peak1_15_57_0.438272267997596_6.07711712912637_1.07722485289274 chr17 71262733 71263147 + 1.07722485289274 NA intron (NM_145158, intron 4 of 7) RLTR20A2B_MM|LTR|ERVK 48025 NM_145158 246707 Mm.23462 NM_145158 ENSMUSG00000024053 Emilin2 FOAP-10 elastin microfibril interfacer 2 protein-coding common_peak1_15_57_0.438272267997596_6.07711712912637_1.07722485289274-3 chr3 10342720 10343010 + 1.07722485289274 NA intron (NM_025512, intron 6 of 7) RLTR20D|LTR|ERVK -7209 NM_001010834 241877 Mm.442146 NM_001010834 ENSMUSG00000058921 Slc10a5 Gm405|mP5 solute carrier family 10 (sodium/bile acid cotransporter family), member 5 protein-coding common_peak1_15_57_0.438272267997596_6.07711712912637_1.07722485289274-2 chr2 60172940 60173339 + 1.07722485289274 NA Intergenic Intergenic -36797 NM_020575 57438 Mm.260635 NM_020575 ENSMUSG00000026977 March7 Axo|Axot|Gtrgeo17 membrane-associated ring finger (C3HC4) 7 protein-coding unique_peak2_15_57_0.438272267997596_6.07711712912637_1.07722485289274 chr4 143389357 143389730 + 1.07722485289274 NA Intergenic CpG -4898 NM_031377 83491 Mm.190607 NM_031377 ENSMUSG00000041805 Pramel1 - preferentially expressed antigen in melanoma-like 1 protein-coding common_peak2_122_878_0.125858426075306_9.84264856818106_1.07684113885269 chr12 110695424 110697192 + 1.07684113885269 NA promoter-TSS (NM_010480) promoter-TSS (NM_010480) 87 NM_010480 15519 Mm.1843 NM_010480 ENSMUSG00000021270 Hsp90aa1 86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4 heat shock protein 90, alpha (cytosolic), class A member 1 protein-coding common_peak1_93_762_-0.145795848222155_9.50264132272345_1.07661750860964 chr1 52577759 52579298 + 1.07661750860964 NA Intergenic Intergenic -52177 NR_024590 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding common_peak2_58_339_0.196135468904123_8.50745867058976_1.07642312208211 chr7 30072074 30073428 + 1.07642312208211 NA promoter-TSS (NM_001253385) promoter-TSS (NM_001253385) 72 NM_177889 330502 Mm.295906 NM_177889 ENSMUSG00000098022 Zfp82 A030010D05|Krab16|Mszf3|Zfp-82 zinc finger protein 82 protein-coding common_peak1_142_1065_0.114198623823251_10.1150910346708_1.07637237927588 chr3 106546980 106548500 + 1.07637237927588 NA promoter-TSS (NM_133869) promoter-TSS (NM_133869) -58 NM_001286986 67171 Mm.290488 NM_026013 ENSMUSG00000027900 Dram2 2010305N14Rik|2610318G18Rik|AI647667|Tmem77 DNA-damage regulated autophagy modulator 2 protein-coding common_peak2_127_924_0.122780641280562_9.91469987604395_1.07595920967257 chr2 155691450 155692629 + 1.07595920967257 NA intron (NM_019828, intron 1 of 18) CpG 345 NM_019828 56407 Mm.234944 NM_019828 ENSMUSG00000038324 Trpc4ap 4833429F06Rik|D2Ertd113e|Trrp4ap|mFLJ00177|truss transient receptor potential cation channel, subfamily C, member 4 associated protein protein-coding common_peak1_181_1658_-0.0971408170494605_10.6475277624311_1.07590679404238 chr2 30691332 30694163 + 1.07590679404238 NA Intergenic Intergenic -28463 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak2_151_1340_-0.108892384948517_10.3346473294302_1.07567767085204 chr11 53808609 53812448 + 1.07567767085204 NA intron (NR_033332, intron 3 of 3) RSINE1|SINE|B4 40055 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_302_2756_0.0720991577485499_11.4649331308845_1.07552900288314 chr5 105138151 105142776 + 1.07552900288314 NA promoter-TSS (NM_001256005) promoter-TSS (NM_001256005) -877 NM_001256005 17472 Mm.440525 NM_008620 ENSMUSG00000079363 Gbp4 AW228052|Mag-2|Mpa-2|Mpa2 guanylate binding protein 4 protein-coding common_peak2_575_6588_-0.0480968936216364_12.6617953646153_1.07551434139394 chr11 70801118 70809682 + 1.07551434139394 NA intron (NM_001045526, intron 1 of 4) intron (NM_001045526, intron 1 of 4) 7161 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak1_21_89_0.367944646364276_6.67582541951181_1.07547493207022-4 chr7 43400267 43400860 + 1.07547493207022 NA Intergenic Intergenic -7717 NM_172900 243958 Mm.24444 NM_172900 ENSMUSG00000030468 Siglecg 9830164H23|A630096C01Rik|Siglec-G|Siglec10|mSiglec-G sialic acid binding Ig-like lectin G protein-coding common_peak1_21_89_0.367944646364276_6.67582541951181_1.07547493207022-2 chr14 53946357 53946670 + 1.07547493207022 NA Intergenic Intergenic 307416 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_21_89_0.367944646364276_6.67582541951181_1.07547493207022-3 chr2 31823168 31823746 + 1.07547493207022 NA intron (NM_178887, intron 4 of 6) intron (NM_178887, intron 4 of 6) -12877 NM_183424 227717 Mm.185027 NM_183424 ENSMUSG00000043102 Qrfp P518 pyroglutamylated RFamide peptide protein-coding common_peak1_21_89_0.367944646364276_6.67582541951181_1.07547493207022 chr10 37336997 37337474 + 1.07547493207022 NA Intergenic Intergenic -198309 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak2_50_376_-0.210749936141207_8.45304574519806_1.07500155160414 chr7 47110233 47112705 + 1.07500155160414 NA intron (NM_001163565, intron 2 of 13) L3|LINE|CR1 21129 NM_001163565 19259 Mm.4654 NM_013643 ENSMUSG00000030854 Ptpn5 Step protein tyrosine phosphatase, non-receptor type 5 protein-coding common_peak2_108_752_0.135236180857708_9.62412414510078_1.07488239086443 chr2 150291869 150295141 + 1.07488239086443 NA Intergenic MERV1_I-int|LTR|ERV1 35988 NM_001142410 100216455 Mm.484816 NM_001142410 ENSMUSG00000079008 Gm14124 EG640962|ENSMUSG00000074735|Gm10749|OTTMUSG00000015734 predicted gene 14124 protein-coding common_peak2_31_222_-0.278034325608781_7.66188273711591_1.074478364696 chr7 58736318 58737592 + 1.074478364696 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 78753 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_37_269_-0.249839082467585_7.95189605581704_1.07422920934722-2 chr5 139298605 139299343 + 1.07422920934722 NA intron (NM_172723, intron 3 of 10) intron (NM_172723, intron 3 of 10) 26490 NM_172723 231821 Mm.297819 NM_172723 ENSMUSG00000056413 Adap1 4930431P11Rik|Centa1|GC1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding common_peak1_37_269_-0.249839082467585_7.95189605581704_1.07422920934722 chr17 47531240 47531984 + 1.07422920934722 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 26561 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding unique_peak2_37_269_-0.249839082467585_7.95189605581704_1.07422920934722 chr13 111787975 111789839 + 1.07422920934722 NA intron (NM_011945, intron 1 of 19) intron (NM_011945, intron 1 of 19) 20076 NM_011945 26401 Mm.15918 NM_011945 ENSMUSG00000021754 Map3k1 MAPKKK1|MEKK1|Mekk mitogen-activated protein kinase kinase kinase 1 protein-coding common_peak1_51_287_0.212108554384976_8.2759792786348_1.07419787105827 chr13 113052061 113052881 + 1.07419787105827 NA intron (NM_001281487, intron 2 of 11) intron (NM_001281487, intron 2 of 11) -6083 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak1_267_2628_-0.0765301040956103_11.3220333745702_1.07391946586647 chr3 60500164 60502185 + 1.07391946586647 NA promoter-TSS (NM_001253711) promoter-TSS (NM_001253711) -5 NM_001253711 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_41_216_0.242535722540375_7.88281909371467_1.07372132048618 chr14 87140707 87141625 + 1.07372132048618 NA promoter-TSS (NM_019670) promoter-TSS (NM_019670) -52 NM_019670 56419 Mm.440585 NM_019670 ENSMUSG00000022021 Diaph3 4930417P13Rik|Dia2|Diap3|Drf3|mDia2|mKIAA4117|p134MDia2 diaphanous related formin 3 protein-coding common_peak1_59_453_-0.191279743506854_8.73090861553749_1.07344887086832 chr15 61986376 61987310 + 1.07344887086832 NA intron (NM_001177354, intron 1 of 2) CpG 1502 NM_001177352 17869 Mm.2444 NM_010849 ENSMUSG00000022346 Myc AU016757|Myc2|Niard|Nird|bHLHe39 myelocytomatosis oncogene protein-coding common_peak1_29_137_0.300131975819534_7.25859044468794_1.07279172774437 chr19 32485454 32486223 + 1.07279172774437 NA promoter-TSS (NM_010799) promoter-TSS (NM_010799) 69 NM_010799 17330 Mm.255116 NM_010799 ENSMUSG00000024896 Minpp1 AA408516 multiple inositol polyphosphate histidine phosphatase 1 protein-coding common_peak1_29_137_0.300131975819534_7.25859044468794_1.07279172774437-2 chr9 13820141 13820827 + 1.07279172774437 NA intron (NM_001310721, intron 2 of 9) ORR1A4|LTR|ERVL-MaLR 6569 NR_037622 74360 Mm.157212 NM_026665 ENSMUSG00000031922 Cep57 3110002L15Rik|4921510P06Rik|4931428M20Rik|AI467480|Tsp57|mKIAA0092 centrosomal protein 57 protein-coding common_peak2_140_1046_0.115219876648494_10.0896556652551_1.07261037230793 chr16 44331657 44333658 + 1.07261037230793 NA 5' UTR (NM_001159419, exon 1 of 25) 5' UTR (NM_001159419, exon 1 of 25) 181 NM_198034 320007 Mm.242144 NM_198034 ENSMUSG00000022696 Sidt1 AW045928|B830021E24Rik SID1 transmembrane family, member 1 protein-coding common_peak1_87_705_-0.150502008204517_9.38827336916892_1.072316113396 chr3 14610657 14611944 + 1.072316113396 NA promoter-TSS (NM_001099674) promoter-TSS (NM_001099674) -44 NM_001099674 69126 Mm.389020 NM_001099674 ENSMUSG00000078784 1810022K09Rik AI746582|AL023036 RIKEN cDNA 1810022K09 gene protein-coding common_peak2_87_705_-0.150502008204517_9.38827336916892_1.072316113396 chr10 20118341 20119665 + 1.072316113396 NA intron (NM_008580, intron 23 of 29) PB1D10|SINE|Alu -29917 NM_008635 17761 Mm.20928 NM_008635 ENSMUSG00000019996 Map7 E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste microtubule-associated protein 7 protein-coding common_peak1_52_392_-0.202643736815494_8.51706363385086_1.07218491387652 chr19 8837341 8838313 + 1.07218491387652 NA 5' UTR (NM_001136064, exon 1 of 12) 5' UTR (NM_001136064, exon 1 of 12) 360 NM_001136064 14705 Mm.345134 NM_008144 ENSMUSG00000071657 Bscl2 2900097C17Rik|AI046355|Gng3lg Berardinelli-Seip congenital lipodystrophy 2 (seipin) protein-coding common_peak1_52_392_-0.202643736815494_8.51706363385086_1.07218491387652-2 chr8 124241453 124242257 + 1.07218491387652 NA intron (NM_139272, intron 1 of 15) B2_Mm2|SINE|B2 10461 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_157_1402_-0.105587891320226_10.4015053479598_1.0718866929086 chr5 32132741 32134964 + 1.0718866929086 NA Intergenic Intergenic -2620 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_157_1402_-0.105587891320226_10.4015053479598_1.0718866929086 chr6 57580210 57583058 + 1.0718866929086 NA intron (NM_025992, intron 1 of 22) intron (NM_025992, intron 1 of 22) 642 NM_025992 67138 Mm.297393 NM_025992 ENSMUSG00000029798 Herc6 1700121D12Rik|2510038N07Rik|4930427L17Rik|AI451296|CEB1|Herc5 hect domain and RLD 6 protein-coding unique_peak2_61_470_-0.186288733692122_8.78643888276672_1.071878344906 chr8 25968832 25970793 + 1.071878344906 NA intron (NM_029884, intron 4 of 17) intron (NM_029884, intron 4 of 17) 6932 NM_029884 52120 Mm.28326 NM_029884 ENSMUSG00000037260 Hgsnat 9430010M12Rik|AW208455|D8Ertd354e|Tmem76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding common_peak2_46_251_0.225851163926101_8.09020550546297_1.07182351670978 chr13 114817619 114818882 + 1.07182351670978 NA promoter-TSS (NM_013826) promoter-TSS (NM_013826) 13 NM_001113374 17434 Mm.19027 NM_013826 ENSMUSG00000015536 Mocs2 AI415403 molybdenum cofactor synthesis 2 protein-coding common_peak2_231_1969_0.0845203337278964_10.9862400812077_1.0716993291654 chr12 4906604 4908652 + 1.0716993291654 NA promoter-TSS (NM_145441) promoter-TSS (NM_145441) -108 NM_145441 217379 Mm.259170 NM_145441 ENSMUSG00000020634 Ubxn2a 6330407P03Rik|Ubxd4 UBX domain protein 2A protein-coding common_peak2_192_1560_0.0945504704683504_10.6555300572121_1.07158299117577 chr2 34801157 34803455 + 1.07158299117577 NA Intergenic CpG -2394 NM_145522 227746 Mm.158705 NM_145522 ENSMUSG00000070953 Rabepk 8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40 Rab9 effector protein with kelch motifs protein-coding common_peak2_98_809_-0.140323633957824_9.59161628079308_1.07146648849864 chr2 122629580 122631715 + 1.07146648849864 NA promoter-TSS (NM_001033256) promoter-TSS (NM_001033256) 22 NM_001033256 214616 Mm.271306 NM_001033256 Spata5l1 AV141009|C130039A10Rik spermatogenesis associated 5-like 1 protein-coding common_peak1_168_1518_-0.101092305972674_10.5183600015157_1.07119195564467 chr16 56037027 56038516 + 1.07119195564467 NA promoter-TSS (NM_029092) promoter-TSS (NM_029092) 3 NM_029092 52575 Mm.288742 NM_029092 ENSMUSG00000044763 Trmt10c 1300018J16Rik|D16Ertd454e|Rg9mtd1|Rnmtd1 tRNA methyltransferase 10C protein-coding unique_peak1_14_52_0.454123666848149_5.95498228798727_1.07077048545736 chr15 76766790 76767178 + 1.07077048545736 NA intron (NM_198420, intron 1 of 10) intron (NM_198420, intron 1 of 10) -43139 NM_176828 223665 Mm.291713 NM_145472 ENSMUSG00000033707 C030006K11Rik 1110033I13Rik RIKEN cDNA C030006K11 gene protein-coding common_peak1_14_52_0.454123666848149_5.95498228798727_1.07077048545736 chr10 81564386 81564740 + 1.07077048545736 NA intron (NR_074087, intron 3 of 6) intron (NR_074087, intron 3 of 6) 5119 NM_001276288 14797 Mm.180013 NM_010347 ENSMUSG00000054452 Aes AL024115|Esp1|Grg|Grg-5|Grg5|Tle5 amino-terminal enhancer of split protein-coding common_peak1_14_52_0.454123666848149_5.95498228798727_1.07077048545736-3 chr2 117439617 117440065 + 1.07077048545736 NA Intergenic Intergenic -96964 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_14_52_0.454123666848149_5.95498228798727_1.07077048545736-2 chr14 71112266 71112627 + 1.07077048545736 NA Intergenic Lx9|LINE|L1 -138827 NR_046075 100043132 Mm.399336 NR_046075 Gm4251 - predicted gene 4251 ncRNA common_peak1_119_1014_-0.125382957102122_9.92457253352148_1.07037791095986 chr4 140905277 140906796 + 1.07037791095986 NA promoter-TSS (NM_008812) promoter-TSS (NM_008812) -324 NM_008812 18600 Mm.2296 NM_008812 ENSMUSG00000028927 Padi2 Pdi|Pdi2|mKIAA0994 peptidyl arginine deiminase, type II protein-coding common_peak2_239_2304_-0.0820576691599282_11.1295222007367_1.07030349645503 chr6 128886113 128891859 + 1.07030349645503 NA intron (NM_001289706, intron 2 of 6) intron (NM_001289706, intron 2 of 6) 1399 NM_020257 93675 Mm.391513 NM_020257 ENSMUSG00000030365 Clec2i Clr-g|Clrg|Dcl1|LCL-1|OCILrP2 C-type lectin domain family 2, member i protein-coding common_peak1_290_2620_0.0735712411882758_11.3926872589226_1.07005305073473 chr6 146576912 146578806 + 1.07005305073473 NA promoter-TSS (NM_138757) promoter-TSS (NM_138757) -24 NM_138757 71177 Mm.271774 NM_138757 ENSMUSG00000040250 Asun 4933424B01Rik|Spata30 asunder, spermatogenesis regulator protein-coding common_peak2_64_385_0.184457483064817_8.68468577880049_1.07002923142505 chr16 97461546 97463554 + 1.07002923142505 NA intron (NM_010846, intron 1 of 10) intron (NM_010846, intron 1 of 10) 355 NM_010846 17857 Mm.33996 NM_010846 ENSMUSG00000000386 Mx1 AI893580|Mx|Mx-1 MX dynamin-like GTPase 1 protein-coding common_peak1_18_125_-0.376915720103026_6.7888220634484_1.06993855485892 chr12 76255438 76255774 + 1.06993855485892 NA intron (NM_138745, intron 1 of 27) intron (NM_138745, intron 1 of 27) 374 NM_138745 108156 Mm.29584 NM_138745 ENSMUSG00000021048 Mthfd1 Dcs|E430024A07Rik|Mthfd methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase protein-coding common_peak1_18_125_-0.376915720103026_6.7888220634484_1.06993855485892-2 chr14 63606424 63606829 + 1.06993855485892 NA promoter-TSS (NM_173393) promoter-TSS (NM_173393) 96 NM_173393 219149 Mm.32071 NM_173393 ENSMUSG00000035067 Xkr6 2700008G24Rik|BC024502|Xrg6 X-linked Kx blood group related 6 protein-coding unique_peak2_18_125_-0.376915720103026_6.7888220634484_1.06993855485892 chr9 20544364 20545287 + 1.06993855485892 NA Intergenic Intergenic -23406 NM_001082485 77519 Mm.431849 NM_001082485 ENSMUSG00000060510 Zfp266 5330440G10Rik|5730601F06Rik|AW552317 zinc finger protein 266 protein-coding unique_peak2_23_161_-0.32607453479253_7.17681273548836_1.06934801725228 chrX 18177562 18178584 + 1.06934801725228 NA intron (NM_001310444, intron 2 of 28) intron (NM_001310444, intron 2 of 28) 15498 NM_001310444 22289 Mm.257498 NM_009483 ENSMUSG00000037369 Kdm6a Utx lysine (K)-specific demethylase 6A protein-coding common_peak1_42_309_-0.230397235020288_8.16092578776409_1.06922595972015-2 chr17 6594792 6595672 + 1.06922595972015 NA Intergenic Intergenic -6439 NM_001166627 100040531 Mm.457987 NM_001166627 ENSMUSG00000095677 Dynlt1f 100040631|Dynlt1e dynein light chain Tctex-type 1F protein-coding common_peak1_42_309_-0.230397235020288_8.16092578776409_1.06922595972015 chr10 88406069 88406705 + 1.06922595972015 NA intron (NM_001004164, intron 2 of 20) intron (NM_001004164, intron 2 of 20) 26975 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak2_81_649_-0.156240331664034_9.2661757420838_1.06916825703638 chr18 36782388 36783891 + 1.06916825703638 NA promoter-TSS (NM_008214) promoter-TSS (NM_008214) 66 NM_008214 15115 Mm.10528 NM_008214 ENSMUSG00000001380 Hars MMHRS histidyl-tRNA synthetase protein-coding common_peak2_81_649_-0.156240331664034_9.2661757420838_1.06916825703638-2 chr18 39016697 39018670 + 1.06916825703638 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 24538 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak2_27_191_-0.298397750703231_7.43576362536954_1.06892122624424 chr7 39588500 39588983 + 1.06892122624424 NA Intergenic CpG 70975 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak1_32_156_0.282699198769253_7.43597034827625_1.06892122624424 chr7 49096357 49097059 + 1.06892122624424 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 137635 NM_001111016 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak1_27_191_-0.298397750703231_7.43576362536954_1.06892122624424 chr5 54101557 54101963 + 1.06892122624424 NA intron (NM_001081103, intron 3 of 11) intron (NM_001081103, intron 3 of 11) 103237 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding unique_peak2_27_191_-0.298397750703231_7.43576362536954_1.06892122624424 chr15 50802725 50804147 + 1.06892122624424 NA intron (NM_001310485, intron 5 of 7) intron (NM_001310485, intron 5 of 7) 85613 NM_001310481 83925 Mm.30466 NM_032000 ENSMUSG00000038679 Trps1 AI115454|AI447310|D15Ertd586e trichorhinophalangeal syndrome I (human) protein-coding common_peak1_123_888_0.123867218277249_9.85797321796839_1.06848027249389 chr1 151754493 151756035 + 1.06848027249389 NA promoter-TSS (NM_001039644) promoter-TSS (NM_001039644) -110 NM_001311165 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding common_peak2_68_416_0.178691746802132_8.79324944684573_1.06840142989578 chr19 11769776 11771310 + 1.06840142989578 NA intron (NM_025606, intron 1 of 3) intron (NM_025606, intron 1 of 3) 128 NM_025606 94063 Mm.203928 NM_025606 ENSMUSG00000024683 Mrpl16 2310039D06Rik mitochondrial ribosomal protein L16 protein-coding common_peak2_54_409_-0.19818908111953_8.58038555894568_1.06815526275488 chr7 75482490 75484092 + 1.06815526275488 NA intron (NM_029332, intron 1 of 36) intron (NM_029332, intron 1 of 36) 27757 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_375_3942_-0.0621099741227287_11.9140230080465_1.06696909773821 chr4 133751710 133754896 + 1.06696909773821 NA exon (NM_001080819, exon 1 of 20) exon (NM_001080819, exon 1 of 20) 308 NM_001080819 93760 Mm.22478 NM_001080819 ENSMUSG00000007880 Arid1a 1110030E03Rik|BAF250a|Osa1|Smarcf1 AT rich interactive domain 1A (SWI-like) protein-coding common_peak1_13_47_0.474989938110414_5.82245746977636_1.06690755293406 chr2 153263014 153263420 + 1.06690755293406 NA intron (NM_080463, intron 6 of 6) intron (NM_080463, intron 6 of 6) 21685 NM_080463 140484 Mm.293761 NM_080463 ENSMUSG00000046020 Pofut1 O-FucT-1|mKIAA0180 protein O-fucosyltransferase 1 protein-coding common_peak1_13_47_0.474989938110414_5.82245746977636_1.06690755293406-2 chr7 49462312 49462668 + 1.06690755293406 NA intron (NM_001111016, intron 10 of 38) intron (NM_001111016, intron 10 of 38) 174345 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak2_256_2499_-0.0781107303927726_11.2486570143531_1.06678176959977 chr8 26157300 26159588 + 1.06678176959977 NA 5' UTR (NM_199042, exon 1 of 3) 5' UTR (NM_199042, exon 1 of 3) 275 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding common_peak2_226_1916_0.0853101253195803_10.9472896843279_1.06660165595251 chr18 46596562 46599847 + 1.06660165595251 NA promoter-TSS (NM_025698) promoter-TSS (NM_025698) 500 NM_010120 13664 Mm.262037 NM_010120 ENSMUSG00000057561 Eif1a C76390|Ef1a|Eftu|Eif4c|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A protein-coding common_peak2_48_265_0.221593801409496_8.16607933620594_1.06654848779424 chr4 128653854 128655530 + 1.06654848779424 NA promoter-TSS (NM_001195130) promoter-TSS (NM_001195130) -10 NM_001195130 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic-like 2 (Drosophila) protein-coding common_peak1_12_42_0.502544178752479_5.67753684407834_1.06647553678992-4 chr8 117267178 117267541 + 1.06647553678992 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 10340 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_12_42_0.502544178752479_5.67753684407834_1.06647553678992-3 chr4 138218154 138218508 + 1.06647553678992 NA intron (NM_001122897, intron 1 of 12) intron (NM_001122897, intron 1 of 12) 1204 NM_001122897 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding common_peak1_12_42_0.502544178752479_5.67753684407834_1.06647553678992-2 chr16 64942198 64942534 + 1.06647553678992 NA intron (NM_008310, intron 2 of 2) intron (NM_008310, intron 2 of 2) 90281 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak1_12_42_0.502544178752479_5.67753684407834_1.06647553678992 chr10 8504455 8504783 + 1.06647553678992 NA intron (NM_177387, intron 1 of 7) intron (NM_177387, intron 1 of 7) 14206 NM_177387 338362 Mm.41163 NM_177387 ENSMUSG00000047712 Ust D930010O20Rik|UA2OST uronyl-2-sulfotransferase protein-coding unique_peak1_12_42_0.502544178752479_5.67753684407834_1.06647553678992 chr10 14026945 14027328 + 1.06647553678992 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 60757 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_25_113_0.322531230476191_6.99415562940284_1.06619523693994-2 chr17 33358473 33359075 + 1.06619523693994 NA 5' UTR (NM_207541, exon 1 of 4) 5' UTR (NM_207541, exon 1 of 4) 104 NM_207541 224694 Mm.170029 NM_207541 ENSMUSG00000003929 Zfp81 AA409460|AA409461|C330034P10Rik|D330034E10Rik|Hszfp36|KRAB13|Zfp78 zinc finger protein 81 protein-coding common_peak1_25_113_0.322531230476191_6.99415562940284_1.06619523693994-4 chr9 120059094 120059693 + 1.06619523693994 NA intron (NM_009987, intron 1 of 1) intron (NM_009987, intron 1 of 1) 8903 NM_009987 13051 Mm.44065 NM_009987 ENSMUSG00000052336 Cx3cr1 - chemokine (C-X3-C motif) receptor 1 protein-coding unique_peak2_25_113_0.322531230476191_6.99415562940284_1.06619523693994 chr7 105633091 105633882 + 1.06619523693994 NA promoter-TSS (NM_001285871) promoter-TSS (NM_001285871) 85 NM_018880 55992 Mm.29290 NM_018880 ENSMUSG00000036989 Trim3 BERP1|HAC1|Rnf22 tripartite motif-containing 3 protein-coding common_peak1_25_113_0.322531230476191_6.99415562940284_1.06619523693994-3 chr6 91877521 91878038 + 1.06619523693994 NA promoter-TSS (NM_172730) promoter-TSS (NM_172730) -274 NM_172730 232236 Mm.234879 NM_172730 ENSMUSG00000034083 Ccdc174 C130022K22Rik coiled-coil domain containing 174 protein-coding common_peak1_25_113_0.322531230476191_6.99415562940284_1.06619523693994 chr15 66788757 66789231 + 1.06619523693994 NA intron (NM_001029841, intron 5 of 7) intron (NM_001029841, intron 5 of 7) 42835 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_102_700_0.138277249766116_9.52240925889368_1.06607116003379 chr7 45872726 45873771 + 1.06607116003379 NA intron (NM_133950, intron 1 of 4) intron (NM_133950, intron 1 of 4) 408 NM_133950 68137 Mm.298433 NM_133950 ENSMUSG00000002778 Kdelr1 8030486F04Rik|AW215843|Erd2.1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 protein-coding common_peak1_165_1288_0.104081631993052_10.3840773643582_1.06555938355467 chr12 3235057 3236523 + 1.06555938355467 NA promoter-TSS (NR_015551) promoter-TSS (NR_015551) -1 NR_015551 74173 Mm.309774 NM_028796 ENSMUSG00000079179 Rab10os 1700012B15Rik|1810036A22Rik RAB10, member RAS oncogene family, opposite strand ncRNA common_peak2_186_1711_-0.0945493122991223_10.6941923302516_1.06543975249946 chr16 49885986 49889925 + 1.06543975249946 NA intron (NM_010581, intron 4 of 9) intron (NM_010581, intron 4 of 9) 32301 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_92_752_-0.145689333784338_9.48366138777976_1.06522228027557 chr13 115089707 115091163 + 1.06522228027557 NA promoter-TSS (NM_134058) promoter-TSS (NM_134058) -277 NM_134058 105083 Mm.486295 NM_134058 ENSMUSG00000042275 Pelo AA409897|AI852218 pelota homolog (Drosophila) protein-coding common_peak1_101_837_-0.136523345385539_9.64254476100658_1.06519603327534 chr4 129542175 129543444 + 1.06519603327534 NA promoter-TSS (NM_008228) promoter-TSS (NM_008228) -163 NM_008228 433759 Mm.202504 NM_008228 ENSMUSG00000028800 Hdac1 HD1|Hdac1-ps|MommeD5|RPD3 histone deacetylase 1 protein-coding common_peak1_43_230_0.23466101246425_7.96907954764818_1.06496599353145 chr10 94036034 94036720 + 1.06496599353145 NA promoter-TSS (NM_001304720) promoter-TSS (NM_001304720) 376 NM_053072 13998 Mm.269596 NM_053072 ENSMUSG00000020021 Fgd6 AA123052|Etohd4|ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding common_peak1_43_230_0.23466101246425_7.96907954764818_1.06496599353145-2 chr2 118642575 118643424 + 1.06496599353145 NA Intergenic Intergenic -20578 NM_001033254 214230 Mm.241857 NM_001033254 ENSMUSG00000074923 Pak6 4732456M09 p21 protein (Cdc42/Rac)-activated kinase 6 protein-coding common_peak1_57_331_0.200236194352_8.47515752852292_1.06411311115077 chr10 95970732 95971706 + 1.06411311115077 NA intron (NM_001001932, intron 1 of 28) intron (NM_001001932, intron 1 of 28) 30556 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak2_108_905_-0.131625004516598_9.75755473778793_1.06406160228466 chr11 20248059 20250183 + 1.06406160228466 NA intron (NM_172260, intron 1 of 6) CpG 303 NM_172260 216543 Mm.260314 NM_172260 ENSMUSG00000044066 Cep68 6030463E10Rik|AI481761|BC027174|Kiaa0582 centrosomal protein 68 protein-coding common_peak1_39_285_-0.242124797961257_8.03880893779776_1.06374716325971 chr10 8065266 8065988 + 1.06374716325971 NA Intergenic Intergenic -109504 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak2_39_285_-0.242124797961257_8.03880893779776_1.06374716325971 chr8 111853578 111854550 + 1.06374716325971 NA intron (NM_011801, intron 1 of 6) CpG 246 NM_011801 23837 Mm.279437 NM_011801 ENSMUSG00000031954 Cfdp1 AA408409|Bcnt|Bucentaur|Cfdp|cp27 craniofacial development protein 1 protein-coding common_peak1_39_285_-0.242124797961257_8.03880893779776_1.06374716325971-2 chr4 130925731 130926323 + 1.06374716325971 NA intron (NM_010686, intron 1 of 7) intron (NM_010686, intron 1 of 7) 12693 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding common_peak2_114_806_0.130141527694049_9.72149562712481_1.06355950059052 chr16 30069426 30071204 + 1.06355950059052 NA Intergenic CpG 4958 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hairy and enhancer of split 1 (Drosophila) protein-coding common_peak2_419_4502_-0.0578659092923139_12.1077378076957_1.06301443041809 chr4 135151481 135156443 + 1.06301443041809 NA intron (NM_019732, intron 2 of 5) intron (NM_019732, intron 2 of 5) 33317 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_371_3568_0.0627371572112789_11.8326727646547_1.0630112211896 chr9 31279146 31281922 + 1.0630112211896 NA Intergenic Intergenic 9133 NM_001101597 638580 Mm.373655 NM_001101597 Gm7244 EG638580 predicted gene 7244 protein-coding common_peak2_107_744_0.134335573862783_9.60826440228092_1.06258152859683 chr13 100832219 100833641 + 1.06258152859683 NA intron (NM_022885, intron 1 of 15) intron (NM_022885, intron 1 of 15) 497 NM_022885 69048 Mm.402215 NM_022885 ENSMUSG00000021629 Slc30a5 1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1 solute carrier family 30 (zinc transporter), member 5 protein-coding common_peak2_107_744_0.134335573862783_9.60826440228092_1.06258152859683-2 chr3 104770288 104772452 + 1.06258152859683 NA intron (NM_183224, intron 6 of 6) intron (NM_183224, intron 6 of 6) 6177 NM_183224 329731 Mm.389494 NM_183224 ENSMUSG00000055865 Fam19a3 7530404M11Rik|TAFA3|Tafa-3 family with sequence similarity 19, member A3 protein-coding common_peak1_44_325_-0.222549516666446_8.23745339589786_1.06250148101286 chr4 155769838 155770423 + 1.06250148101286 NA 3' UTR (NM_147776, exon 4 of 4) 3' UTR (NM_147776, exon 4 of 4) 4431 NM_147776 246228 Mm.26515 NM_147776 ENSMUSG00000042116 Vwa1 4932416A11Rik|WARP von Willebrand factor A domain containing 1 protein-coding unique_peak1_10_33_0.545722590257257_5.36032413637897_1.0624982013315 chr10 88383479 88383808 + 1.0624982013315 NA intron (NM_001004164, intron 1 of 20) RMER10A|LTR|ERVL 4231 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak2_125_1073_-0.120556806847274_10.0084998745618_1.06247292421314 chr16 75854064 75857108 + 1.06247292421314 NA Intergenic Intergenic 53680 NM_023380 67742 Mm.131406 NM_023380 ENSMUSG00000022876 Samsn1 4930571B16Rik|930571B16Rik|Hacs1|SLy2 SAM domain, SH3 domain and nuclear localization signals, 1 protein-coding common_peak1_30_214_-0.281510644855154_7.60743752716188_1.06246180126323 chr5 135743732 135744295 + 1.06246180126323 NA intron (NM_172541, intron 1 of 11) CpG 159 NM_172541 215210 Mm.11688 NM_172541 ENSMUSG00000039886 Tmem120a 2010310D06Rik|Tmpit transmembrane protein 120A protein-coding common_peak1_156_1391_-0.10546786144308_10.3902095651272_1.06214100136212 chr10 68191913 68193871 + 1.06214100136212 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 85834 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_224_1895_0.0855409755446939_10.9315137366706_1.06196499024516 chr17 47520575 47525658 + 1.06196499024516 NA intron (NM_001081635, intron 1 of 6) MIR|SINE|MIR 18065 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak2_557_6339_-0.0487035767995394_12.605915336627_1.06176885420376 chr9 66589889 66596504 + 1.06176885420376 NA promoter-TSS (NM_001302122) promoter-TSS (NM_001302122) -81 NM_001302122 235441 Mm.32465 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156 ubiquitin specific peptidase 3 protein-coding common_peak1_113_954_-0.12824589218658_9.83523397682982_1.0615257843953 chr4 132352928 132353733 + 1.0615257843953 NA intron (NR_003270, intron 1 of 2) intron (NR_003270, intron 1 of 2) 356 NR_003270 399101 Mm.486919 NR_002904 ENSMUSG00000085241 Snhg3 Rnu17d|U17HG small nucleolar RNA host gene 3 ncRNA common_peak1_33_237_-0.264669191147417_7.76248316773423_1.0613170104063 chr4 155178628 155179367 + 1.0613170104063 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 43538 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_33_237_-0.264669191147417_7.76248316773423_1.0613170104063 chr7 125592877 125594072 + 1.0613170104063 NA Intergenic Intergenic -9955 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak1_33_237_-0.264669191147417_7.76248316773423_1.0613170104063-2 chr9 32900886 32901440 + 1.0613170104063 NA Intergenic Intergenic 27803 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak2_36_261_-0.25363935032604_7.90660332637443_1.06083837040254-2 chr11 65794147 65795389 + 1.06083837040254 NA Intergenic L1MB8|LINE|L1 -6409 NM_001316367 26398 Mm.412922 NM_009157 ENSMUSG00000033352 Map2k4 JNKK1|MEK4|MKK4|PRKMK4|Sek1|Serk1 mitogen-activated protein kinase kinase 4 protein-coding common_peak2_36_261_-0.25363935032604_7.90660332637443_1.06083837040254 chr10 76032417 76033330 + 1.06083837040254 NA intron (NM_177475, intron 1 of 1) intron (NM_177475, intron 1 of 1) 261 NM_177475 64453 Mm.80609 NM_177475 ENSMUSG00000049764 Zfp280b D10Jhu82e|Suhw2 zinc finger protein 280B protein-coding common_peak1_430_4290_0.0574575173998628_12.0958269444483_1.060661881555 chr10 86704444 86707371 + 1.060661881555 NA promoter-TSS (NM_011631) promoter-TSS (NM_011631) 96 NM_001003939 103220 Mm.440762 NM_153595 ENSMUSG00000044937 Ttc41 AI449705|AU041509|Gnn tetratricopeptide repeat domain 41 protein-coding common_peak1_159_1422_-0.103748785336638_10.4228455538582_1.06065309271705 chr9 57520698 57522288 + 1.06065309271705 NA intron (NM_007747, intron 1 of 4) CpG 261 NM_007747 12858 Mm.273403 NM_007747 ENSMUSG00000000088 Cox5a AA959768|CcOX cytochrome c oxidase subunit Va protein-coding common_peak1_17_118_-0.390132401435276_6.69975156259031_1.0605688555681 chr14 79542210 79542707 + 1.0605688555681 NA intron (NM_001286411, intron 2 of 8) intron (NM_001286411, intron 2 of 8) 26784 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding unique_peak2_17_118_-0.390132401435276_6.69975156259031_1.0605688555681 chr7 34912276 34912930 + 1.0605688555681 NA intron (NM_008820, intron 1 of 14) CpG 196 NM_008820 18624 Mm.69751 NM_008820 ENSMUSG00000063931 Pepd Pep-4|Pep4|dal peptidase D protein-coding common_peak2_271_2674_-0.0753376704562765_11.3476543409477_1.06027628985851 chr4 129555157 129560292 + 1.06027628985851 NA promoter-TSS (NR_106199) promoter-TSS (NR_106199) 87 NR_106199 102465997 NR_106199 ENSMUSG00000099070 Mir8119 Gm27567|mmu-mir-8119 microRNA 8119 ncRNA common_peak1_20_84_0.368083707660796_6.5934327899681_1.05996894461527 chr7 100853338 100853790 + 1.05996894461527 NA intron (NM_177073, intron 1 of 10) intron (NM_177073, intron 1 of 10) 9849 NM_177073 320100 Mm.40336 NM_177073 ENSMUSG00000008318 Relt E430021K24Rik|Tnfrsf19l RELT tumor necrosis factor receptor protein-coding unique_peak2_20_84_0.368083707660796_6.5934327899681_1.05996894461527 chr6 144781212 144781822 + 1.05996894461527 NA Intergenic CpG 108649 NR_040519 66760 Mm.233631 NR_040519 ENSMUSG00000085785 Sox5os3 4933425H06Rik SRY (sex determining region Y)-box 5, opposite strand 3 ncRNA common_peak1_59_347_0.192325247935331_8.5391061198164_1.05974400561278 chr9 59617251 59618037 + 1.05974400561278 NA intron (NR_038074, intron 1 of 22) CpG 360 NR_038074 67287 Mm.439943 NM_029922 ENSMUSG00000025237 Parp6 1700119G14Rik|2310028P13Rik|3110038K10Rik|ARTD17|C030013N01Rik|PARP-6 poly (ADP-ribose) polymerase family, member 6 protein-coding common_peak2_28_131_0.304269195154115_7.19652871693551_1.0588528284504 chr17 50158693 50159413 + 1.0588528284504 NA intron (NM_181397, intron 2 of 9) intron (NM_181397, intron 2 of 9) 31444 NM_181397 76438 Mm.41854 NM_181397 ENSMUSG00000039316 Rftn1 2310015N21Rik|AI853526 raftlin lipid raft linker 1 protein-coding common_peak1_28_131_0.304269195154115_7.19652871693551_1.0588528284504 chr1 153722968 153723419 + 1.0588528284504 NA non-coding (NR_046171, exon 3 of 3) non-coding (NR_046171, exon 3 of 3) 14636 NR_046171 329271 Mm.384841 NR_046171 ENSMUSG00000100334 C230024C17Rik C230024C17 RIKEN cDNA C230024C17 gene ncRNA common_peak1_28_131_0.304269195154115_7.19652871693551_1.0588528284504-2 chr8 41374216 41374760 + 1.0588528284504 NA intron (NM_019734, intron 1 of 13) CpG 209 NM_019734 11886 Mm.22547 NM_019734 ENSMUSG00000031591 Asah1 2310081N20Rik|AC|Asah N-acylsphingosine amidohydrolase 1 protein-coding common_peak2_28_131_0.304269195154115_7.19652871693551_1.0588528284504-2 chr2 72837519 72838252 + 1.0588528284504 NA Intergenic Intergenic -24168 NR_102349 76218 Mm.75260 NR_102348 ENSMUSG00000085427 6430710C18Rik 5033406J01Rik RIKEN cDNA 6430710C18 gene ncRNA common_peak2_96_648_0.14326369536427_9.41370651568127_1.05874336565792 chr1 34849101 34850896 + 1.05874336565792 NA promoter-TSS (NM_175421) promoter-TSS (NM_175421) 39 NM_145516 226971 Mm.292751 NM_145516 ENSMUSG00000026123 Plekhb2 2310009M15Rik|AU018239|Evt2|Phdc|evt-2 pleckstrin homology domain containing, family B (evectins) member 2 protein-coding unique_peak2_26_183_-0.301354389217418_7.3728847614483_1.05844818046318-2 chr3 105751697 105753193 + 1.05844818046318 NA intron (NM_145541, intron 1 of 7) B3|SINE|B2 46987 NM_001163356 109050 Mm.212591 NM_175398 ENSMUSG00000048458 Fam212b 6530418L21Rik|inka2 family with sequence similarity 212, member B protein-coding unique_peak2_26_183_-0.301354389217418_7.3728847614483_1.05844818046318 chr15 76477400 76478347 + 1.05844818046318 NA promoter-TSS (NM_013481) promoter-TSS (NM_013481) 428 NM_008296 15499 Mm.347444 NM_008296 ENSMUSG00000022556 Hsf1 AA960185|HSTF|HSTF 1|Hsf1alpha|Hsf1beta heat shock factor 1 protein-coding unique_peak2_26_183_-0.301354389217418_7.3728847614483_1.05844818046318-3 chr6 108453893 108454714 + 1.05844818046318 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -35440 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_169_1328_0.102128769762674_10.4271897741575_1.05844555618762 chr15 72808662 72811408 + 1.05844555618762 NA non-coding (NR_002864, exon 1 of 1) non-coding (NR_002864, exon 1 of 1) 289 NR_002864 353342 Mm.440245 NR_002864 ENSMUSG00000106847 Peg13 - paternally expressed 13 ncRNA common_peak2_117_834_0.126506328866766_9.7688855517948_1.0579392731291 chr7 73583507 73585453 + 1.0579392731291 NA Intergenic Intergenic -26085 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak2_51_384_-0.206681079754976_8.48537409570478_1.05772598862529 chr8 105269275 105270933 + 1.05772598862529 NA TTS (NM_015821) TTS (NM_015821) 303 NM_001256044 26386 Mm.89204 NM_011939 ENSMUSG00000033249 Hsf4 HSF 4|HSTF 4|HSTF4|ldis1|mHSF4 heat shock transcription factor 4 protein-coding common_peak2_63_377_0.187235461276808_8.65586015485948_1.057418902592 chr9 44325942 44327311 + 1.057418902592 NA promoter-TSS (NM_007875) promoter-TSS (NM_007875) -219 NM_007875 13478 Mm.18353 NM_007875 ENSMUSG00000032123 Dpagt1 AU021132|Dpagt2|GPT|Gnpta dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) protein-coding common_peak1_116_983_-0.125436539578095_9.87979623555019_1.0570734027743 chr4 109201316 109202498 + 1.0570734027743 NA intron (NM_133885, intron 1 of 22) CpG 365 NM_133885 100273 Mm.366315 NM_133885 ENSMUSG00000028559 Osbpl9 2600011I06Rik|AU015843|Orp-9 oxysterol binding protein-like 9 protein-coding common_peak2_127_925_0.121221813424_9.91547928997224_1.05700139202944 chr6 35177094 35178515 + 1.05700139202944 NA intron (NM_027513, intron 1 of 42) CpG 188 NM_027513 70699 Mm.261208 NM_027513 ENSMUSG00000038759 Nup205 3830404O05Rik|AV248391|mKIAA0225 nucleoporin 205 protein-coding common_peak1_103_709_0.136970652621599_9.54016054070284_1.05682180367338 chr6 118418909 118420256 + 1.05682180367338 NA promoter-TSS (NM_194339) promoter-TSS (NM_194339) -165 NM_194339 213895 Mm.25269 NM_194339 ENSMUSG00000030138 Bms1 AA408648|AU020092|AU043373|BB007109|BC030906|Bms1l|mKIAA0187 BMS1, ribosome biogenesis factor protein-coding common_peak2_658_7290_0.0440658836230003_12.8539339280079_1.05674138359298 chr13 52997754 53003795 + 1.05674138359298 NA Intergenic Intergenic -19735 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_157_1401_-0.104559231710951_10.4009910181551_1.0565111401577 chr17 64600714 64602452 + 1.0565111401577 NA promoter-TSS (NM_008549) promoter-TSS (NM_008549) -66 NM_008549 17158 Mm.2433 NM_008549 ENSMUSG00000024085 Man2a1 Mana-2|Mana2|Map-2 mannosidase 2, alpha 1 protein-coding common_peak2_80_640_-0.157838463625863_9.24526131480581_1.05649108341411 chr4 125066081 125067517 + 1.05649108341411 NA exon (NM_175246, exon 1 of 4) exon (NM_175246, exon 1 of 4) 106 NM_175246 76793 Mm.22548 NM_175246 ENSMUSG00000050213 Snip1 2410133M08Rik Smad nuclear interacting protein 1 protein-coding common_peak2_204_1685_0.0901600310016644_10.7644688364429_1.05617922785099 chr10 7472253 7474708 + 1.05617922785099 NA promoter-TSS (NM_029975) promoter-TSS (NM_029975) -3 NM_029975 77777 Mm.442442 NM_029975 ENSMUSG00000079685 Ulbp1 A430108B07Rik|MULT1 UL16 binding protein 1 protein-coding common_peak2_66_513_-0.175080849044155_8.9180841246718_1.05611370522061 chr6 88074570 88075986 + 1.05611370522061 NA Intergenic Intergenic -9195 NM_133933 103963 Mm.188544 NM_133933 ENSMUSG00000030062 Rpn1 AU018702|D6Wsu137e|Rpn-1 ribophorin I protein-coding common_peak1_64_496_-0.18018752122939_8.86700828094759_1.05605570111159 chr8 71537451 71538122 + 1.05605570111159 NA promoter-TSS (NM_198095) promoter-TSS (NM_198095) -349 NM_198095 69550 Mm.260325 NM_198095 ENSMUSG00000046718 Bst2 2310015I10Rik|Bst-2|C87040|CD317|DAMP-1|GREG bone marrow stromal cell antigen 2 protein-coding unique_peak2_22_154_-0.337663601180727_7.10729260468387_1.05596247959579-2 chr9 122232965 122234263 + 1.05596247959579 NA intron (NM_133979, intron 11 of 12) intron (NM_133979, intron 11 of 12) 40414 NR_106185 102465896 NR_106185 ENSMUSG00000098922 Mir8106 Gm27594|mmu-mir-8106 microRNA 8106 ncRNA common_peak1_22_154_-0.337663601180727_7.10729260468387_1.05596247959579 chr14 79331402 79331934 + 1.05596247959579 NA Intergenic Intergenic -30033 NM_025427 66214 Mm.29811 NM_025427 ENSMUSG00000022018 Rgcc 1190002H23Rik|Rgc-32|Rgc32 regulator of cell cycle protein-coding common_peak1_22_154_-0.337663601180727_7.10729260468387_1.05596247959579-2 chr3 104638671 104639228 + 1.05596247959579 NA intron (NM_009196, intron 1 of 4) CpG 285 NM_009196 20501 Mm.9086 NM_009196 ENSMUSG00000032902 Slc16a1 AL022710|Mct1 solute carrier family 16 (monocarboxylic acid transporters), member 1 protein-coding unique_peak2_22_154_-0.337663601180727_7.10729260468387_1.05596247959579 chr5 20942291 20943491 + 1.05596247959579 NA intron (NM_001080977, intron 1 of 7) intron (NM_001080977, intron 1 of 7) -8098 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA unique_peak2_37_189_0.257120906252299_7.6984160614571_1.05583322273733 chr2 29718021 29719466 + 1.05583322273733 NA intron (NM_001039087, intron 12 of 25) intron (NM_001039087, intron 12 of 25) -42785 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak2_37_189_0.257120906252299_7.6984160614571_1.05583322273733 chr13 100124402 100125431 + 1.05583322273733 NA promoter-TSS (NM_011420) promoter-TSS (NM_011420) 61 NM_011420 20595 Mm.2025 NM_011420 ENSMUSG00000021645 Smn1 AI849087|Gemin1|Smn survival motor neuron 1 protein-coding common_peak2_102_847_-0.13637257078646_9.65973416916997_1.05574925323453 chr11 115403076 115404932 + 1.05574925323453 NA intron (NM_026729, intron 1 of 5) CpG 238 NM_026729 68572 Mm.271062 NM_026729 ENSMUSG00000018858 Mrpl58 1110001A02Rik|1110002E03Rik|Ict1|MRP-L58 mitochondrial ribosomal protein L58 protein-coding common_peak1_53_400_-0.198638548428969_8.54813915224043_1.05568583102404 chr11 70801569 70802652 + 1.05568583102404 NA intron (NM_001045526, intron 1 of 4) intron (NM_001045526, intron 1 of 4) 10451 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak2_251_2187_0.0794367595319354_11.1351154025585_1.05527811785672 chr17 6978283 6983715 + 1.05527811785672 NA intron (NM_026611, intron 1 of 8) intron (NM_026611, intron 1 of 8) 2139 NM_026611 68195 Mm.181237 NM_026611 ENSMUSG00000094724 Rnaset2b 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2B protein-coding common_peak1_41_301_-0.234317784340224_8.12124584715497_1.05521243888603 chr9 108508046 108508700 + 1.05521243888603 NA intron (NM_133794, intron 1 of 23) intron (NM_133794, intron 1 of 23) 368 NM_133794 97541 Mm.272427 NM_133794 ENSMUSG00000032604 Qars 1110018N24Rik|1200016L19Rik|C80286|GLNRS glutaminyl-tRNA synthetase protein-coding common_peak1_46_342_-0.218933678746795_8.31259792679942_1.05474182075807 chr1 72711336 72712088 + 1.05474182075807 NA exon (NM_009084, exon 2 of 4) exon (NM_009084, exon 2 of 4) 452 NM_009084 19981 Mm.21529 NM_009084 ENSMUSG00000046330 Rpl37a - ribosomal protein L37a protein-coding unique_peak2_34_169_0.272054778385832_7.54541832533062_1.05466374715375 chr13 113595831 113596961 + 1.05466374715375 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 22168 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak1_34_169_0.272054778385832_7.54541832533062_1.05466374715375 chr11 115188076 115188652 + 1.05466374715375 NA intron (NM_001033393, intron 2 of 9) intron (NM_001033393, intron 2 of 9) 877 NM_001033393 320534 Mm.260587 NM_001033393 ENSMUSG00000045980 Tmem104 C630005D06Rik|mFLJ00021 transmembrane protein 104 protein-coding common_peak2_232_1981_0.0833703136873609_10.9944264040302_1.05463401374521 chr7 46918832 46920879 + 1.05463401374521 NA promoter-TSS (NM_021884) promoter-TSS (NM_021884) 75 NM_021884 22088 Mm.241334 NM_021884 ENSMUSG00000014402 Tsg101 AI255943|CC2 tumor susceptibility gene 101 protein-coding common_peak1_72_567_-0.167428093119053_9.06603307294515_1.05446958686633 chr18 67799497 67800517 + 1.05446958686633 NA promoter-TSS (NM_027556) promoter-TSS (NM_027556) -64 NR_045376 75286 Mm.307315 NR_045376 4930549G23Rik - RIKEN cDNA 4930549G23 gene ncRNA common_peak2_71_440_0.173275138687858_8.87127241490145_1.05444212535463 chr9 45054727 45056061 + 1.05444212535463 NA intron (NM_001093749, intron 1 of 5) CpG 213 NM_001093749 319742 Mm.49611 NM_176993 ENSMUSG00000070305 Mpzl3 5430427F17Rik|A530065I17Rik|rc myelin protein zero-like 3 protein-coding common_peak1_24_107_0.331127689972916_6.92045134714993_1.05435020828852-3 chr4 102573362 102573832 + 1.05435020828852 NA intron (NM_019840, intron 6 of 14) intron (NM_019840, intron 6 of 14) 3537 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak1_24_107_0.331127689972916_6.92045134714993_1.05435020828852-4 chr4 134757236 134757891 + 1.05435020828852 NA intron (NM_145554, intron 2 of 8) MTD|LTR|ERVL-MaLR 10441 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak1_24_107_0.331127689972916_6.92045134714993_1.05435020828852-2 chr2 29658975 29659611 + 1.05435020828852 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 39573 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak2_24_107_0.331127689972916_6.92045134714993_1.05435020828852 chrX 151780005 151781045 + 1.05435020828852 NA Intergenic Intergenic -22757 NM_021523 59026 Mm.27372 NM_021523 ENSMUSG00000025261 Huwe1 5430439H10Rik|AU041296|Arf-bp1|C430014N20Rik|C80292|Gm1718|Ib772|LASU1|Mule|Ureb1 HECT, UBA and WWE domain containing 1 protein-coding common_peak2_24_107_0.331127689972916_6.92045134714993_1.05435020828852 chr1 64302422 64303088 + 1.05435020828852 NA Intergenic Intergenic -181366 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding common_peak1_24_107_0.331127689972916_6.92045134714993_1.05435020828852 chr13 32904084 32904581 + 1.05435020828852 NA Intergenic Intergenic -6192 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak1_24_107_0.331127689972916_6.92045134714993_1.05435020828852-5 chr9 96705352 96705814 + 1.05435020828852 NA intron (NM_175537, intron 2 of 2) intron (NM_175537, intron 2 of 2) 26092 NM_175537 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak2_209_1964_-0.0881210552827927_10.8962530695046_1.05429718485985 chr2 155551801 155555629 + 1.05429718485985 NA intron (NR_040613, intron 2 of 3) B1_Mur1|SINE|Alu 3215 NR_040613 74945 Mm.401956 NR_040613 ENSMUSG00000086529 Acss2os 4930471I20Rik acyl-CoA synthetase short-chain family member 2, opposite strand ncRNA common_peak2_174_1581_-0.0979825830709373_10.5785425929373_1.05426653738893 chr9 22304622 22308377 + 1.05426653738893 NA intron (NM_145612, intron 1 of 7) intron (NM_145612, intron 1 of 7) 1139 NM_145612 235050 Mm.306038 NM_145612 ENSMUSG00000066829 Zfp810 BC005471 zinc finger protein 810 protein-coding common_peak2_148_1123_0.110498681886694_10.1896756611643_1.05416700280841 chr9 95957513 95961202 + 1.05416700280841 NA intron (NM_001311130, intron 1 of 41) RLTR11C_MM|LTR|ERVK 4597 NM_001311130 24127 Mm.291179 NM_011916 ENSMUSG00000032410 Xrn1 Dhm2|exo|mXrn1 5'-3' exoribonuclease 1 protein-coding unique_peak2_31_150_0.284460834986445_7.3806351568183_1.05389692447797 chr5 23708512 23709825 + 1.05389692447797 NA TTS (NR_038090) TTS (NR_038090) 3499 NR_038090 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak1_31_150_0.284460834986445_7.3806351568183_1.05389692447797 chr11 109420789 109421495 + 1.05389692447797 NA Intergenic Intergenic -4804 NM_025275 13929 Mm.211850 NM_025275 ENSMUSG00000020610 Amz2 AA408420|ESTM12|X83328 archaelysin family metallopeptidase 2 protein-coding common_peak2_31_150_0.284460834986445_7.3806351568183_1.05389692447797 chr11 62751848 62752964 + 1.05389692447797 NA Intergenic Intergenic -23313 NM_133208 170740 Mm.339982 NM_133208 ENSMUSG00000005267 Zfp287 B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74 zinc finger protein 287 protein-coding common_peak1_19_78_0.387353479453673_6.49745748790394_1.05325031401236-3 chr15 84557455 84557873 + 1.05325031401236 NA 5' UTR (NM_177630, exon 1 of 1) 5' UTR (NM_177630, exon 1 of 1) 159 NM_177630 223732 Mm.6471 NM_177630 ENSMUSG00000055745 Ldoc1l BC058638|Mar6|Mart6 leucine zipper, down-regulated in cancer 1-like protein-coding common_peak2_19_78_0.387353479453673_6.49745748790394_1.05325031401236 chr4 116993829 116994367 + 1.05325031401236 NA intron (NM_009478, intron 1 of 9) intron (NM_009478, intron 1 of 9) 315 NM_009478 22275 Mm.46484 NM_009478 ENSMUSG00000028684 Urod AI323803|UPD|Uro-d uroporphyrinogen decarboxylase protein-coding common_peak1_19_78_0.387353479453673_6.49745748790394_1.05325031401236-4 chr4 46557360 46557796 + 1.05325031401236 NA intron (NM_001164804, intron 2 of 11) intron (NM_001164804, intron 2 of 11) 8862 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding unique_peak2_19_78_0.387353479453673_6.49745748790394_1.05325031401236 chr1 164081343 164082061 + 1.05325031401236 NA TTS (NM_001164059) TTS (NM_001164059) 19626 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak1_19_78_0.387353479453673_6.49745748790394_1.05325031401236 chr1 74241104 74241570 + 1.05325031401236 NA intron (NM_029711, intron 1 of 9) PB1D7|SINE|Alu 4787 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak1_19_78_0.387353479453673_6.49745748790394_1.05325031401236-2 chr13 13378127 13378593 + 1.05325031401236 NA intron (NM_031999, intron 1 of 6) L1MB8|LINE|L1 15264 NM_031999 83924 Mm.379269 NM_031999 ENSMUSG00000021306 Gpr137b AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1 G protein-coupled receptor 137B protein-coding unique_peak1_19_78_0.387353479453673_6.49745748790394_1.05325031401236 chr17 84420170 84420561 + 1.05325031401236 NA intron (NM_183021, intron 21 of 37) intron (NM_183021, intron 21 of 37) 45843 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak1_297_2982_-0.0710109490412361_11.5070427878146_1.05317551131902 chr8 117286346 117289556 + 1.05317551131902 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 30932 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_38_276_-0.240798716441328_7.99334280782852_1.05295525832039 chr10 88356465 88357850 + 1.05295525832039 NA promoter-TSS (NM_027878) promoter-TSS (NM_027878) -82 NM_027878 71712 Mm.35450 NM_027878 ENSMUSG00000020057 Dram1 1200002N14Rik|Dram DNA-damage regulated autophagy modulator 1 protein-coding common_peak2_38_276_-0.240798716441328_7.99334280782852_1.05295525832039-2 chr9 21160272 21161626 + 1.05295525832039 NA Intergenic ID_B1|SINE|B4 -4765 NM_183408 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding common_peak2_260_2545_-0.0770843570822208_11.2754745253602_1.05257210780386 chr2 61592291 61594869 + 1.05257210780386 NA intron (NM_001164072, intron 1 of 7) CpG 483 NM_001164071 21353 Mm.244393 NM_011529 ENSMUSG00000064289 Tank C86182|E430026L09Rik|I-TRAF TRAF family member-associated Nf-kappa B activator protein-coding common_peak2_47_258_0.223579491591897_8.1285980334825_1.05251335559421 chr13 110394281 110395642 + 1.05251335559421 NA promoter-TSS (NM_152804) promoter-TSS (NM_152804) -83 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo-like kinase 2 protein-coding common_peak2_217_1821_0.0870473029139411_10.874830895259_1.05248872457747 chr1 75234759 75237818 + 1.05248872457747 NA promoter-TSS (NM_020266) promoter-TSS (NM_020266) -135 NM_020266 56812 Mm.489660 NM_020266 ENSMUSG00000026203 Dnajb2 2700059H22Rik|Dnajb10|Hsj1|mDj8 DnaJ heat shock protein family (Hsp40) member B2 protein-coding common_peak1_55_417_-0.194182070876602_8.61026809664258_1.05243616276612-2 chr8 119344399 119345115 + 1.05243616276612 NA intron (NM_024219, intron 1 of 3) CpG 219 NM_024219 68196 Mm.358714 NM_024219 ENSMUSG00000031839 Hsbp1 0610007A03Rik|AA408769|Hsp25 heat shock factor binding protein 1 protein-coding common_peak1_55_417_-0.194182070876602_8.61026809664258_1.05243616276612 chr11 103028389 103029028 + 1.05243616276612 NA intron (NM_008707, intron 1 of 11) intron (NM_008707, intron 1 of 11) 146 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding unique_peak2_16_111_-0.403818661083432_6.60544559151589_1.05217849096885-2 chr5 135657600 135658363 + 1.05217849096885 NA Intergenic Intergenic 25327 NM_146002 215160 Mm.295438 NM_031398 ENSMUSG00000039917 Rhbdd2 0610011L13Rik|AI480532|Rhbdl7|Usmg1 rhomboid domain containing 2 protein-coding common_peak2_16_111_-0.403818661083432_6.60544559151589_1.05217849096885 chr12 84222256 84222869 + 1.05217849096885 NA Intergenic Intergenic -3681 NM_001163501 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding unique_peak2_16_111_-0.403818661083432_6.60544559151589_1.05217849096885-3 chr9 13302103 13303271 + 1.05217849096885 NA Intergenic Intergenic 55708 NM_025534 66396 Mm.290620 NM_025534 ENSMUSG00000079084 Ccdc82 2310043N13Rik coiled-coil domain containing 82 protein-coding unique_peak2_16_111_-0.403818661083432_6.60544559151589_1.05217849096885 chr10 93305529 93306314 + 1.05217849096885 NA intron (NM_013508, intron 1 of 4) intron (NM_013508, intron 1 of 4) 5238 NM_013508 13713 Mm.4454 NM_013508 ENSMUSG00000008398 Elk3 D430049E23Rik|Erp|Etrp|Net|Sap-2 ELK3, member of ETS oncogene family protein-coding common_peak1_151_1153_0.107773628310476_10.2263143228007_1.05139649571712 chr9 5298081 5300107 + 1.05139649571712 NA intron (NM_009807, intron 1 of 9) intron (NM_009807, intron 1 of 9) 577 NM_009807 12362 Mm.1051 NM_009807 ENSMUSG00000025888 Casp1 ICE|Il1bc caspase 1 protein-coding common_peak2_35_252_-0.251695901635287_7.85714562387667_1.05074380013104 chr14 20294509 20295313 + 1.05074380013104 NA intron (NM_026341, intron 1 of 8) intron (NM_026341, intron 1 of 8) 221 NM_026341 67725 Mm.317636 NM_026341 ENSMUSG00000021809 Nudt13 4933433B15Rik nudix (nucleoside diphosphate linked moiety X)-type motif 13 protein-coding common_peak1_35_252_-0.251695901635287_7.85714562387667_1.05074380013104 chr3 100488309 100488953 + 1.05074380013104 NA intron (NM_001142952, intron 1 of 1) CpG 561 NM_001142952 74645 Mm.226900 NM_001142952 ENSMUSG00000044468 Fam46c 4930431B09Rik|AI449797 family with sequence similarity 46, member C protein-coding common_peak1_29_206_-0.284830524901622_7.55107169504851_1.05064270287265 chr4 101262869 101263516 + 1.05064270287265 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 2090 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_48_358_-0.210963796912367_8.38235813536687_1.05063879267073 chr5 107698251 107699698 + 1.05063879267073 NA non-coding (NR_045871, exon 3 of 3) non-coding (NR_045871, exon 3 of 3) 4506 NR_045871 654809 Mm.399159 NR_045871 ENSMUSG00000106333 4930428O21Rik - RIKEN cDNA 4930428O21 gene ncRNA common_peak2_192_1776_-0.0924226735824192_10.7490166292375_1.0504803298698 chr14 45656684 45658975 + 1.0504803298698 NA TTS (NR_039593) TTS (NR_039593) 224 NR_039593 100628600 NR_039593 ENSMUSG00000093167 Mir5131 mmu-mir-5131|mu-mir-5131 microRNA 5131 ncRNA common_peak2_88_580_0.150624015359659_9.25770636108436_1.05031823211752 chr1 131637684 131639616 + 1.05031823211752 NA intron (NM_007799, intron 1 of 9) intron (NM_007799, intron 1 of 9) 336 NM_007799 13034 Mm.230249 NM_007799 ENSMUSG00000004552 Ctse A430072O03Rik|C920004C08Rik|CE|CatE cathepsin E protein-coding common_peak2_57_434_-0.189595965037165_8.67007360821751_1.04998367956829 chr17 57193283 57195052 + 1.04998367956829 NA promoter-TSS (NM_019418) promoter-TSS (NM_019418) 14 NM_019418 50930 Mm.483369 NM_019418 ENSMUSG00000005824 Tnfsf14 HVEM-L|HVEML|LIGHT|LTg|Ly113|Tnlg1d tumor necrosis factor (ligand) superfamily, member 14 protein-coding unique_peak2_57_434_-0.189595965037165_8.67007360821751_1.04998367956829 chr1 58954680 58956963 + 1.04998367956829 NA intron (NM_172406, intron 1 of 15) intron (NM_172406, intron 1 of 15) 17661 NM_172406 70827 Mm.222887 NM_172406 ENSMUSG00000026028 Trak2 2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549 trafficking protein, kinesin binding 2 protein-coding common_peak2_259_2275_0.0778543003990269_11.1912119925061_1.04997128006869 chr2 136890478 136892785 + 1.04997128006869 NA promoter-TSS (NM_021527) promoter-TSS (NM_021527) -225 NM_001286983 59030 Mm.272570 NM_021527 ENSMUSG00000027274 Mkks 1300013E18Rik|AI463362|AI957237|Bbs6 McKusick-Kaufman syndrome protein-coding common_peak1_56_324_0.200202811634357_8.444397313733_1.04966821072927 chr11 115641373 115642317 + 1.04966821072927 NA Intergenic B1F1|SINE|Alu -13550 NM_001252395 67283 Mm.383426 NM_026071 ENSMUSG00000020744 Slc25a19 2900089E13Rik|DNC|MUP1|TPC solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 protein-coding common_peak1_117_993_-0.124963325334106_9.89462037889523_1.04913112480583 chrX 94177363 94178632 + 1.04913112480583 NA Intergenic CpG 34654 NM_012010 26905 Mm.218851 NM_012010 ENSMUSG00000035150 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked protein-coding common_peak1_132_1143_-0.115971024116028_10.1018858247204_1.04865005505777 chr6 97178082 97179195 + 1.04865005505777 NA intron (NM_001081111, intron 1 of 16) intron (NM_001081111, intron 1 of 16) 486 NM_001081111 232286 Mm.30893 NM_001081111 ENSMUSG00000030059 Tmf1 7030402D04Rik|Gm153|Tmf1` TATA element modulatory factor 1 protein-coding unique_peak2_32_229_-0.268170103283495_7.71140499930263_1.04862480756824 chr4 63371631 63373001 + 1.04862480756824 NA intron (NM_001305432, intron 17 of 20) intron (NM_001305432, intron 17 of 20) 9867 NM_011016 18406 Mm.14173 NM_011016 ENSMUSG00000061540 Orm2 Agp1|Orm-2 orosomucoid 2 protein-coding common_peak1_21_146_-0.339874602142413_7.02973504376516_1.0485942287041 chr3 129363623 129364166 + 1.0485942287041 NA Intergenic MIR|SINE|MIR -31145 NM_007934 13809 Mm.1193 NM_007934 ENSMUSG00000028024 Enpep 6030431M22Rik|APA|Bp-1/6C3|Ly-51|Ly51 glutamyl aminopeptidase protein-coding common_peak2_221_1864_0.0855705634084512_10.9077451968468_1.04841511579246 chr7 46845202 46847731 + 1.04841511579246 NA promoter-TSS (NM_001136069) promoter-TSS (NM_001136069) -616 NM_001136069 16828 Mm.29324 NM_010699 ENSMUSG00000063229 Ldha Ldh1|Ldhm|l7R2 lactate dehydrogenase A protein-coding common_peak1_110_924_-0.129391388038979_9.78861386138419_1.0476693989053 chr1 53796600 53798036 + 1.0476693989053 NA Intergenic Intergenic -12103 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak1_242_2336_-0.079965419636661_11.1504593089645_1.04731394738343 chr2 61592970 61594807 + 1.04731394738343 NA intron (NM_001164072, intron 1 of 7) intron (NM_001164072, intron 1 of 7) 791 NM_001164071 21353 Mm.244393 NM_011529 ENSMUSG00000064289 Tank C86182|E430026L09Rik|I-TRAF TRAF family member-associated Nf-kappa B activator protein-coding common_peak2_220_2086_-0.0846737091108292_10.9848780306044_1.04695630661028 chr7 13036894 13039220 + 1.04695630661028 NA promoter-TSS (NM_145578) promoter-TSS (NM_145578) -79 NM_145578 22192 Mm.196580 NM_145578 ENSMUSG00000005575 Ube2m 2510040H03Rik|UBC12|Ubc-rs2 ubiquitin-conjugating enzyme E2M protein-coding common_peak1_94_770_-0.142117259639823_9.51952842009512_1.04647983920799 chr11 116488902 116490588 + 1.04647983920799 NA intron (NM_026364, intron 1 of 9) intron (NM_026364, intron 1 of 9) 601 NM_026364 67763 Mm.25125 NM_026364 ENSMUSG00000015869 Prpsap1 5730409F23Rik|PAP39 phosphoribosyl pyrophosphate synthetase-associated protein 1 protein-coding common_peak2_59_452_-0.188098496262175_8.72931799191515_1.0464746729716 chr10 7780242 7781856 + 1.0464746729716 NA promoter-TSS (NM_145418) promoter-TSS (NM_145418) -132 NM_145418 215751 Mm.471825 NM_145418 ENSMUSG00000040006 Ginm1 AA589616 glycoprotein integral membrane 1 protein-coding common_peak1_84_547_0.153609764891964_9.17483696540651_1.0463055326707 chr10 13500452 13501536 + 1.0463055326707 NA promoter-TSS (NM_025799) promoter-TSS (NM_025799) -34 NM_025799 66848 Mm.26625 NM_025799 ENSMUSG00000019810 Fuca2 0610025O11Rik|5530401P20Rik fucosidase, alpha-L- 2, plasma protein-coding common_peak1_333_3118_0.0664910795001639_11.6401133771242_1.04614580251576 chr17 87342736 87346677 + 1.04614580251576 NA intron (NM_028639, intron 14 of 19) intron (NM_028639, intron 14 of 19) 61820 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak2_49_273_0.214595420362214_8.20532979314163_1.04578302943099 chr15 101173345 101174671 + 1.04578302943099 NA promoter-TSS (NM_007395) promoter-TSS (NM_007395) -117 NM_007395 11479 Mm.308467 NM_007395 ENSMUSG00000000532 Acvr1b 6820432J04|ActR-IB|ActRIB|Acvrlk4|Alk4|SKR2 activin A receptor, type 1B protein-coding common_peak1_61_469_-0.183222430644337_8.78490573124283_1.04541936539247 chr7 83891789 83893095 + 1.04541936539247 NA exon (NM_023403, exon 1 of 3) exon (NM_023403, exon 1 of 3) 442 NM_023403 67943 Mm.117365 NM_023403 ENSMUSG00000038503 Mesdc2 2210015O11Rik|AW537813|mKIAA0081|mesd|msd mesoderm development candidate 2 protein-coding common_peak2_82_530_0.156937818364195_9.13103695998625_1.04536093463777 chr2 5713367 5715455 + 1.04536093463777 NA 5' UTR (NM_001290374, exon 1 of 10) 5' UTR (NM_001290374, exon 1 of 10) 351 NM_001290374 227541 Mm.191949 NM_177343 ENSMUSG00000039145 Camk1d A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK calcium/calmodulin-dependent protein kinase ID protein-coding common_peak1_58_340_0.191898476017652_8.509577167033_1.04526747713879 chr2 30807940 30808563 + 1.04526747713879 NA intron (NM_170592, intron 1 of 3) CpG 274 NM_170592 66617 Mm.33167 NM_170592 ENSMUSG00000026857 Ntmt1 2610205E22Rik|AL033331|AL033332|Mettl11a|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding common_peak1_152_1163_0.106929950372457_10.2383403180945_1.04518447375216 chr13 58214784 58216259 + 1.04518447375216 NA 5' UTR (NM_152234, exon 1 of 10) 5' UTR (NM_152234, exon 1 of 10) 132 NM_152234 56085 Mm.182053 NM_026842 ENSMUSG00000005312 Ubqln1 1110046H03Rik|1810030E05Rik|AU019746|C77538|D13Ertd372e|Da41|Dsk2|Plic-1|Plic1|Xdrp1 ubiquilin 1 protein-coding unique_peak2_27_125_0.309284826518009_7.13192233675892_1.04517185321838 chr7 19472179 19473249 + 1.04517185321838 NA Intergenic Intergenic -14220 NM_172279 232944 Mm.260504 NM_172279 ENSMUSG00000030397 Mark4 2410090P21Rik|C79806|Markl1 MAP/microtubule affinity regulating kinase 4 protein-coding common_peak1_15_104_-0.417992254540954_6.50524939039565_1.04497728052195-2 chr9 114933326 114933682 + 1.04497728052195 NA intron (NM_175380, intron 1 of 7) CpG 483 NM_175380 333433 Mm.38198 NM_175380 ENSMUSG00000050627 Gpd1l 2210409H23Rik|D9Ertd660e glycerol-3-phosphate dehydrogenase 1-like protein-coding common_peak1_15_104_-0.417992254540954_6.50524939039565_1.04497728052195 chr5 135541880 135542264 + 1.04497728052195 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 3050 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding unique_peak2_15_104_-0.417992254540954_6.50524939039565_1.04497728052195 chr16 52469499 52470291 + 1.04497728052195 NA Intergenic Intergenic -16898 NM_009655 11658 Mm.288282 NM_009655 ENSMUSG00000022636 Alcam AI853494|BEN|CD166|DM-GRASP|MuSC|SC1 activated leukocyte cell adhesion molecule protein-coding unique_peak2_15_104_-0.417992254540954_6.50524939039565_1.04497728052195-2 chr6 90681388 90682300 + 1.04497728052195 NA intron (NM_001134383, intron 3 of 13) intron (NM_001134383, intron 3 of 13) 34685 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak2_63_486_-0.178300076584462_8.83862792379011_1.04491490481666 chr1 167349480 167350785 + 1.04491490481666 NA 5' UTR (NM_019993, exon 1 of 11) 5' UTR (NM_019993, exon 1 of 11) 141 NM_019993 56752 Mm.292539 NM_019993 ENSMUSG00000026687 Aldh9a1 AA139417|Abaldh|ESTM40|TMABA-DH|Tmabadh aldehyde dehydrogenase 9, subfamily A1 protein-coding common_peak2_173_1570_-0.0980573234419868_10.5684388035732_1.04481687453253 chr17 34602805 34606965 + 1.04481687453253 NA promoter-TSS (NM_001163379) promoter-TSS (NM_001163379) -976 NM_001163379 55979 Mm.8684 NM_018862 ENSMUSG00000034254 Agpat1 1-AGP|1-AGPAT|AW047140 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) protein-coding common_peak1_143_1255_-0.110098453459893_10.2395715221617_1.04456892519771 chr11 69324821 69326858 + 1.04456892519771 NA promoter-TSS (NM_010599) promoter-TSS (NM_010599) -419 NM_010599 16499 Mm.232472 NM_010599 ENSMUSG00000018470 Kcnab3 C330022D06Rik|Kcnab4|mKv(beta)4 potassium voltage-gated channel, shaker-related subfamily, beta member 3 protein-coding common_peak1_102_701_0.136220663472178_9.52343755204065_1.04445396332911 chr12 87387140 87388271 + 1.04445396332911 NA intron (NM_011479, intron 1 of 11) intron (NM_011479, intron 1 of 11) 650 NM_011479 20773 Mm.565 NM_011479 ENSMUSG00000021036 Sptlc2 LCB2|LCB2a|Spt2 serine palmitoyltransferase, long chain base subunit 2 protein-coding common_peak1_151_1338_-0.106739108368354_10.3335706911401_1.04430539689186 chr19 47536472 47537741 + 1.04430539689186 NA promoter-TSS (NM_175360) promoter-TSS (NM_175360) -86 NM_175360 108689 Mm.218048 NM_175360 ENSMUSG00000042694 Obfc1 0610009H20Rik|2310057J23Rik|AAF-44|AAF44|AI413458|RPA-32 oligonucleotide/oligosaccharide-binding fold containing 1 protein-coding common_peak2_39_203_0.245321196845637_7.79508594039431_1.04418744326769 chr14 55659897 55660960 + 1.04418744326769 NA promoter-TSS (NM_023397) promoter-TSS (NM_023397) 80 NM_023397 67881 Mm.24601 NM_023397 ENSMUSG00000002329 Mdp1 1810034K20Rik|AI035604 magnesium-dependent phosphatase 1 protein-coding common_peak1_39_203_0.245321196845637_7.79508594039431_1.04418744326769 chrX 96126467 96127165 + 1.04418744326769 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 30771 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak2_40_292_-0.233313589356823_8.07810005974384_1.04396727700022 chrX 77517243 77518819 + 1.04396727700022 NA intron (NM_020601, intron 1 of 15) intron (NM_020601, intron 1 of 15) 6804 NM_020601 21372 Mm.258476 NM_020601 ENSMUSG00000025246 Tbl1x 5330429M20|Tbl1 transducin (beta)-like 1 X-linked protein-coding common_peak1_40_292_-0.233313589356823_8.07810005974384_1.04396727700022 chr16 58542964 58543781 + 1.04396727700022 NA Intergenic Intergenic -20060 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding common_peak1_93_623_0.144341179750127_9.35757280873731_1.0437546243538 chr2 32036821 32038139 + 1.0437546243538 NA intron (NM_172268, intron 29 of 35) Lx8|LINE|L1 -13466 NR_106135 102466844 NR_106135 ENSMUSG00000099075 Mir7674 Gm27563|mmu-mir-7674 microRNA 7674 ncRNA common_peak1_77_612_-0.160187502896564_9.1796495122425_1.04373530124606 chr11 85140209 85140933 + 1.04373530124606 NA promoter-TSS (NM_001029934) promoter-TSS (NM_001029934) -616 NM_001029934 237898 Mm.178524 NM_001029934 ENSMUSG00000000804 Usp32 2900074J03Rik|6430526O11Rik|AW045245 ubiquitin specific peptidase 32 protein-coding common_peak1_25_176_-0.312184305442066_7.31151339736197_1.04365361002734-2 chr2 163697632 163698108 + 1.04365361002734 NA intron (NM_011106, intron 1 of 3) intron (NM_011106, intron 1 of 3) 3833 NM_011106 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak1_25_176_-0.312184305442066_7.31151339736197_1.04365361002734 chr12 92883597 92884267 + 1.04365361002734 NA Intergenic MMTV-int|LTR|ERVK 560891 NR_126436 75295 Mm.243878 NR_126436 4930559C10Rik - RIKEN cDNA 4930559C10 gene ncRNA unique_peak2_25_176_-0.312184305442066_7.31151339736197_1.04365361002734 chr12 115847421 115848635 + 1.04365361002734 NA Intergenic Intergenic -152234 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA common_peak2_238_2046_0.0818091270691674_11.040199950558_1.04351418791941 chr11 29171798 29174202 + 1.04351418791941 NA promoter-TSS (NM_134034) promoter-TSS (NM_134034) 93 NM_134034 104570 Mm.276386 NM_134034 ENSMUSG00000020463 Smek2 AW011752|AW557776|Ppp4r3b|mKIAA1387 SMEK homolog 2, suppressor of mek1 (Dictyostelium) protein-coding common_peak2_216_1811_0.0868510739535413_10.866792777023_1.04351360209928 chr16 24220231 24226033 + 1.04351360209928 NA Intergenic Intergenic -170218 NM_178665 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_155_1192_0.105789744285346_10.2732731998379_1.04350067262175 chr12 110601250 110602420 + 1.04350067262175 NA exon (NM_030238, exon 1 of 77) exon (NM_030238, exon 1 of 77) 440 NM_030238 13424 Mm.181430 NM_030238 ENSMUSG00000018707 Dync1h1 9930018I23Rik|AI894280|DHC1|DHC1a|DNCL|Dnchc1|Dnec1|Dnecl|Loa|MAP1C|P22|Swl|mKIAA0325 dynein cytoplasmic 1 heavy chain 1 protein-coding common_peak2_155_1192_0.105789744285346_10.2732731998379_1.04350067262175 chr4 139129680 139131653 + 1.04350067262175 NA intron (NM_001163006, intron 1 of 3) CpG 371 NR_033745 433771 Mm.305990 NM_001163006 ENSMUSG00000050608 Minos1 2310028O11Rik mitochondrial inner membrane organizing system 1 protein-coding common_peak1_73_575_-0.163529039044546_9.08816048192004_1.04338807981003 chr7 29905712 29906682 + 1.04338807981003 NA promoter-TSS (NM_011754) promoter-TSS (NM_011754) -93 NM_001037707 22689 Mm.86747 NM_011754 ENSMUSG00000062040 Zfp27 Zfp-27|mkr-4|mszf76 zinc finger protein 27 protein-coding common_peak2_69_539_-0.168757571340942_8.99243681138036_1.04324045064645 chr6 30339641 30341189 + 1.04324045064645 NA Intergenic Intergenic -35876 NM_001169576 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak2_71_557_-0.166211327583808_9.04101564803728_1.04311047387266 chr11 52272968 52275633 + 1.04311047387266 NA intron (NM_001313981, intron 3 of 10) B1_Mur2|SINE|Alu 8295 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak1_23_101_0.3413501261206_6.84310040503179_1.04305809498327-5 chr19 46702025 46702579 + 1.04305809498327 NA 3' UTR (NM_025563, exon 5 of 5) 3' UTR (NM_025563, exon 5 of 5) -5141 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak1_23_101_0.3413501261206_6.84310040503179_1.04305809498327-4 chr17 5195533 5196049 + 1.04305809498327 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 200717 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_23_101_0.3413501261206_6.84310040503179_1.04305809498327-3 chr11 97280709 97281199 + 1.04305809498327 NA promoter-TSS (NM_008942) promoter-TSS (NM_008942) -378 NM_008942 19155 Mm.29824 NM_008942 ENSMUSG00000001441 Npepps AAP-S|MP100|Psa|R74825|goku aminopeptidase puromycin sensitive protein-coding unique_peak2_23_101_0.3413501261206_6.84310040503179_1.04305809498327 chr3 86758510 86759320 + 1.04305809498327 NA intron (NM_001077688, intron 53 of 54) intron (NM_001077688, intron 53 of 54) 161969 NM_001195496 70762 Mm.44490 NM_027539 ENSMUSG00000028078 Dclk2 6330415M09Rik|AU044875|CL2|CLICK2|Click-II|Dcamkl2 doublecortin-like kinase 2 protein-coding common_peak1_23_101_0.3413501261206_6.84310040503179_1.04305809498327-2 chr10 75289253 75289808 + 1.04305809498327 NA intron (NM_153406, intron 13 of 15) intron (NM_153406, intron 13 of 15) -27347 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_23_101_0.3413501261206_6.84310040503179_1.04305809498327 chr1 86733306 86733797 + 1.04305809498327 NA intron (NM_153530, intron 1 of 20) L1MA8|LINE|L1 29747 NM_001172157 208718 Mm.389152 NM_153530 ENSMUSG00000053333 Dis3l2 4930429A22Rik|8030493P09Rik DIS3 like 3'-5' exoribonuclease 2 protein-coding common_peak2_213_1780_0.0871109294405112_10.8420272658219_1.04294652483891 chr17 15497232 15500743 + 1.04294652483891 NA promoter-TSS (NM_013684) promoter-TSS (NM_013684) -711 NM_011185 19170 Mm.32912 NM_011185 ENSMUSG00000014769 Psmb1 AA409053|C81484|Lmpc5 proteasome (prosome, macropain) subunit, beta type 1 protein-coding common_peak2_62_370_0.18633378333098_8.62844226828629_1.04293495327275 chr6 52011863 52013411 + 1.04293495327275 NA promoter-TSS (NM_018773) promoter-TSS (NM_018773) -88 NM_018773 54353 Mm.221479 NM_018773 ENSMUSG00000059182 Skap2 2610021A10Rik|AA960083|BB137539|RA70|SKAP-HOM|Saps|Scap2|mSKAP55R src family associated phosphoprotein 2 protein-coding common_peak1_67_522_-0.173906252900059_8.94371400979691_1.04231313296066 chr7 99536436 99537437 + 1.04231313296066 NA intron (NM_177231, intron 1 of 15) intron (NM_177231, intron 1 of 15) 1450 NM_177231 109689 Mm.260193 NM_177231 ENSMUSG00000018909 Arrb1 1200006I17Rik|AW208571|G430100A01Rik arrestin, beta 1 protein-coding common_peak1_168_1516_-0.0991915217176231_10.5174096093882_1.0417849747821 chr7 25218813 25219928 + 1.0417849747821 NA intron (NM_207677, intron 1 of 4) CpG 489 NM_207677 67379 Mm.280594 NM_026117 ENSMUSG00000054499 Dedd2 2410050E11Rik|FLAME-3 death effector domain-containing DNA binding protein 2 protein-coding common_peak2_194_1797_-0.0911282690282675_10.7666131710003_1.04144525178339 chr1 165235604 165237711 + 1.04144525178339 NA intron (NM_145513, intron 1 of 6) CpG 301 NM_145513 226591 Mm.21520 NM_145513 ENSMUSG00000040843 Tiprl 1810011K17Rik TIP41, TOR signalling pathway regulator-like (S. cerevisiae) protein-coding common_peak1_123_1052_-0.120382893918698_9.98009827406637_1.04142986857381 chr4 86575089 86576373 + 1.04142986857381 NA promoter-TSS (NM_178376) promoter-TSS (NM_178376) 58 NM_178376 68441 Mm.31178 NM_178376 ENSMUSG00000070934 Rraga 1300010C19Rik|AI255374|FIP-1|RAGA Ras-related GTP binding A protein-coding common_peak1_51_288_0.20710787332661_8.27847961916398_1.04042441069234 chr18 79074189 79075434 + 1.04042441069234 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 34580 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak2_72_449_0.168537835168591_8.89805010880133_1.04022462371839 chr11 69117399 69118881 + 1.04022462371839 NA Intergenic CpG -2313 NM_033041 84653 Mm.98505 NM_033041 ENSMUSG00000023781 Hes7 bHLHb37 hairy and enhancer of split 7 (Drosophila) protein-coding common_peak1_111_933_-0.127489367319024_9.80353405605015_1.04014809663556 chr3 105814902 105816318 + 1.04014809663556 NA promoter-TSS (NR_045845) promoter-TSS (NR_045845) 43 NR_045845 433637 Mm.331285 NR_045845 ENSMUSG00000104835 Gm5547 EG433637 predicted gene 5547 ncRNA common_peak2_174_1580_-0.0970703509565158_10.5780864768801_1.03995053169403 chr7 139949683 139951758 + 1.03995053169403 NA Intergenic Intergenic 6864 NM_009482 22286 Mm.10205 NM_009482 ENSMUSG00000047751 Utf1 AI505934 undifferentiated embryonic cell transcription factor 1 protein-coding common_peak1_54_408_-0.194666014555834_8.57862402566383_1.03987847881584-2 chr9 54585913 54587132 + 1.03987847881584 NA promoter-TSS (NM_029573) promoter-TSS (NM_029573) 11 NM_029573 67834 Mm.279195 NM_029573 ENSMUSG00000032279 Idh3a 1110003P10Rik|1500012E04Rik|AA407078|AI316514 isocitrate dehydrogenase 3 (NAD+) alpha protein-coding common_peak1_54_408_-0.194666014555834_8.57862402566383_1.03987847881584 chr19 46654901 46655912 + 1.03987847881584 NA 3' UTR (NM_001177813, exon 4 of 4) 3' UTR (NM_001177813, exon 4 of 4) 17594 NM_007809 13074 Mm.1262 NM_007809 ENSMUSG00000003555 Cyp17a1 Cyp17|p450c17 cytochrome P450, family 17, subfamily a, polypeptide 1 protein-coding common_peak2_36_183_0.256221695154397_7.65167280363421_1.03972385493539-2 chr4 136027933 136029072 + 1.03972385493539 NA Intergenic Intergenic -6853 NM_013736 27224 Mm.27663 NM_013736 ENSMUSG00000028668 Eloa 110kDa|AA408125|Tceb3|Tceb3a elongin A protein-coding common_peak2_36_183_0.256221695154397_7.65167280363421_1.03972385493539 chr2 170184153 170185185 + 1.03972385493539 NA Intergenic Intergenic -41994 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_252_2199_0.0785544088093406_11.1425650128167_1.03948080027432 chr9 32709380 32712117 + 1.03948080027432 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 14706 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_239_2058_0.0807652515245181_11.0481107403945_1.0393063495233 chr9 35210035 35212308 + 1.0393063495233 NA promoter-TSS (NM_026130) promoter-TSS (NM_026130) -32 NM_026130 67398 Mm.284688 NM_026130 ENSMUSG00000032042 Srpr 1300011P19Rik|D11Mgi27|Srpra signal recognition particle receptor ('docking protein') protein-coding common_peak1_37_268_-0.244485847973377_7.94921943856994_1.03929875977248 chr2 127498640 127499600 + 1.03929875977248 NA intron (NM_019789, intron 2 of 8) intron (NM_019789, intron 2 of 8) -16621 NM_001111331 56461 Mm.315292 NM_019789 ENSMUSG00000079056 Kcnip3 4933407H12Rik|AI413860|Csen|DREAM|KChIP3|R74849 Kv channel interacting protein 3, calsenilin protein-coding unique_peak2_37_268_-0.244485847973377_7.94921943856994_1.03929875977248 chr15 100735404 100736798 + 1.03929875977248 NA Intergenic MTD|LTR|ERVL-MaLR -3364 NR_045782 619313 Mm.123436 NR_045781 I730030J21Rik - RIKEN cDNA I730030J21 gene ncRNA common_peak2_86_694_-0.148071336945018_9.36683349913836_1.03925279552101 chr11 101094863 101096352 + 1.03925279552101 NA promoter-TSS (NM_008949) promoter-TSS (NM_008949) -172 NM_008949 19183 Mm.18344 NM_008949 ENSMUSG00000019303 Psmc3ip C79099|GT198|HOP2|Tbpip proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein protein-coding common_peak1_14_97_-0.43266572270386_6.39837698276328_1.03923963685319 chr11 113172202 113172558 + 1.03923963685319 NA intron (NR_015556, intron 1 of 2) B2_Mm2|SINE|B2 29458 NR_015556 72386 Mm.266961 NR_015556 ENSMUSG00000087259 2610035D17Rik - RIKEN cDNA 2610035D17 gene ncRNA common_peak1_14_97_-0.43266572270386_6.39837698276328_1.03923963685319-4 chr6 30357089 30357525 + 1.03923963685319 NA Intergenic Intergenic 33703 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding unique_peak2_14_97_-0.43266572270386_6.39837698276328_1.03923963685319 chr10 117393554 117394150 + 1.03923963685319 NA Intergenic Intergenic -16879 NM_001310609 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding unique_peak2_14_97_-0.43266572270386_6.39837698276328_1.03923963685319-2 chr11 119847392 119848061 + 1.03923963685319 NA intron (NM_028898, intron 16 of 33) intron (NM_028898, intron 16 of 33) -13361 NR_045312 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA common_peak1_18_73_0.39091083776794_6.40490878451292_1.03923963685319-2 chr13 59456533 59456980 + 1.03923963685319 NA intron (NM_001284221, intron 24 of 24) intron (NM_001284221, intron 24 of 24) 87695 NM_001284221 67269 Mm.153008 NM_023328 ENSMUSG00000021557 Agtpbp1 1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd ATP/GTP binding protein 1 protein-coding unique_peak2_14_97_-0.43266572270386_6.39837698276328_1.03923963685319-3 chr2 45191585 45192417 + 1.03923963685319 NA Intergenic Intergenic -78722 NM_015753 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak1_14_97_-0.43266572270386_6.39837698276328_1.03923963685319-3 chr13 52590608 52590990 + 1.03923963685319 NA intron (NM_001198977, intron 1 of 13) B4|SINE|B4 -6083 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding unique_peak2_14_97_-0.43266572270386_6.39837698276328_1.03923963685319-4 chr5 20941412 20942047 + 1.03923963685319 NA intron (NM_001080977, intron 1 of 7) RSINE1|SINE|B4 -9260 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak1_18_73_0.39091083776794_6.40490878451292_1.03923963685319 chr12 3855773 3856253 + 1.03923963685319 NA intron (NM_001271753, intron 3 of 22) intron (NM_001271753, intron 3 of 22) 6231 NR_045884 100038522 Mm.417270 NR_045884 ENSMUSG00000073242 Dnmt3aos ENSMUSG00000073242|Gm10485 DNA methyltransferase 3A, opposite strand ncRNA common_peak1_14_97_-0.43266572270386_6.39837698276328_1.03923963685319-2 chr11 115712639 115713073 + 1.03923963685319 NA Intergenic Intergenic -4259 NM_008163 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding unique_peak2_28_198_-0.287961306031081_7.49264396752811_1.03904573204697-2 chr15 64051348 64052777 + 1.03904573204697 NA intron (NM_144846, intron 1 of 11) MIR3|SINE|MIR 8386 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_28_198_-0.287961306031081_7.49264396752811_1.03904573204697 chr13 12574415 12575727 + 1.03904573204697 NA intron (NM_026184, intron 2 of 15) intron (NM_026184, intron 2 of 15) 9188 NM_026184 67475 Mm.358706 NM_026184 ENSMUSG00000057069 Ero1lb 1300013B24Rik|1700065B09Rik|AI447560|Ero1b|ero1-beta ERO1-like beta (S. cerevisiae) protein-coding unique_peak2_28_198_-0.287961306031081_7.49264396752811_1.03904573204697 chr1 163403260 163404226 + 1.03904573204697 NA promoter-TSS (NM_001313738) promoter-TSS (NM_001313738) -74 NM_178883 98376 Mm.32901 NM_178883 ENSMUSG00000040124 Gorab NTKL-BP1|SCYL1-BP1|Scyl1bp1 golgin, RAB6-interacting protein-coding common_peak2_33_163_0.272596567542443_7.49385028838931_1.03904573204692 chr8 9975753 9976462 + 1.03904573204692 NA 5' UTR (NM_176953, exon 1 of 2) 5' UTR (NM_176953, exon 1 of 2) 216 NM_176953 319583 Mm.80584 NM_176953 ENSMUSG00000049717 Lig4 5830471N16Rik|tiny ligase IV, DNA, ATP-dependent protein-coding common_peak1_30_144_0.286773114719372_7.32329564737462_1.03901020959373 chr15 81300218 81300825 + 1.03901020959373 NA Intergenic Intergenic -48659 NR_077230 78102 Mm.296832 NR_077229 8430426J06Rik - RIKEN cDNA 8430426J06 gene ncRNA common_peak2_30_144_0.286773114719372_7.32329564737462_1.03901020959373-3 chr5 72647100 72648460 + 1.03901020959373 NA promoter-TSS (NM_001081205) promoter-TSS (NM_001081205) -16 NM_001081205 70701 Mm.38884 NM_001081205 ENSMUSG00000067219 Nipal1 3830408G10Rik|Npal1 NIPA-like domain containing 1 protein-coding common_peak2_30_144_0.286773114719372_7.32329564737462_1.03901020959373 chr11 105589247 105590300 + 1.03901020959373 NA promoter-TSS (NM_181071) promoter-TSS (NM_181071) -213 NM_181071 77097 Mm.22501 NM_175492 ENSMUSG00000053580 Tanc2 3526402J09Rik|5730590C14Rik tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding common_peak2_30_144_0.286773114719372_7.32329564737462_1.03901020959373-2 chr2 68875495 68876564 + 1.03901020959373 NA intron (NM_172856, intron 1 of 9) intron (NM_172856, intron 1 of 9) 14472 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak1_53_302_0.205645894552999_8.34599693074945_1.03850439683611 chr2 36048660 36049388 + 1.03850439683611 NA promoter-TSS (NM_029309) promoter-TSS (NM_029309) 268 NM_026703 68375 Mm.19834 NM_026703 ENSMUSG00000026895 Ndufa8 0610033L03Rik|AW261656 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 protein-coding common_peak1_47_349_-0.210823332553877_8.34579944555539_1.03850439683602 chr7 132859275 132859859 + 1.03850439683602 NA intron (NM_198017, intron 1 of 8) CpG 342 NM_198017 109359 Mm.274824 NM_198017 ENSMUSG00000030965 Fam175b AA589499|AI853413|Abro1|C430003P19Rik family with sequence similarity 175, member B protein-coding unique_peak2_8_57_-0.57990794444126_5.56802702290694_1.03825765497309 chr1 89643833 89644324 + 1.03825765497309 NA intron (NM_178119, intron 6 of 17) RSINE1|SINE|B4 39814 NR_015540 74403 Mm.444291 NR_015540 4933400F21Rik 1700091C04Rik|4930565K10Rik RIKEN cDNA 4933400F21 gene ncRNA common_peak1_126_1082_-0.118606833434281_10.0215141108912_1.03786061273281 chr19 6235264 6236470 + 1.03786061273281 NA promoter-TSS (NM_198168) promoter-TSS (NM_198168) -27 NM_198168 225849 Mm.118076 NM_198168 ENSMUSG00000024777 Ppp2r5b B'beta|BC026670 protein phosphatase 2, regulatory subunit B', beta protein-coding common_peak2_34_244_-0.255192224479037_7.80904182676305_1.03755008137918 chr1 165763634 165764608 + 1.03755008137918 NA exon (NM_011804, exon 1 of 4) exon (NM_011804, exon 1 of 4) 341 NM_011804 433375 Mm.294885 NM_011804 ENSMUSG00000040713 Creg1 AA755314|Creg cellular repressor of E1A-stimulated genes 1 protein-coding common_peak1_42_308_-0.225735857650424_8.15859509907916_1.03671642162338 chr12 118296154 118296951 + 1.03671642162338 NA intron (NM_009239, intron 3 of 5) L1MA5|LINE|L1 4888 NM_009239 20688 Mm.34699 NM_009239 ENSMUSG00000025323 Sp4 5730497N03Rik|HF-1b|HF1-b trans-acting transcription factor 4 protein-coding common_peak2_20_139_-0.351808373146469_6.95337883037173_1.03611409188097 chr7 28597693 28598395 + 1.03611409188097 NA 5' UTR (NM_027470, exon 1 of 10) 5' UTR (NM_027470, exon 1 of 10) 140 NM_027470 70584 Mm.21876 NM_027470 ENSMUSG00000030602 Pak4 5730488L07Rik|AW555722|mKIAA1142 p21 protein (Cdc42/Rac)-activated kinase 4 protein-coding common_peak1_20_139_-0.351808373146469_6.95337883037173_1.03611409188097 chr1 87607791 87608223 + 1.03611409188097 NA Intergenic Intergenic -12305 NM_001110192 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_31_221_-0.271550292038582_7.65864072033082_1.03606575579984 chr17 29436789 29437476 + 1.03606575579984 NA Intergenic Intergenic -53913 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak2_46_252_0.220137512731707_8.09306233106016_1.0358011099824 chr14 121309777 121311756 + 1.0358011099824 NA intron (NM_145465, intron 2 of 10) intron (NM_145465, intron 2 of 10) 68464 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_13_90_-0.447842201367126_6.28387353951513_1.03533151715391-2 chr19 46499566 46499892 + 1.03533151715391 NA Intergenic Intergenic -1919 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_13_90_-0.447842201367126_6.28387353951513_1.03533151715391 chr14 65592708 65593059 + 1.03533151715391 NA intron (NM_028811, intron 1 of 14) intron (NM_028811, intron 1 of 14) 229 NM_001253812 74195 Mm.29719 NM_028811 ENSMUSG00000022031 Elp3 2610507P14Rik|KAT9 elongator acetyltransferase complex subunit 3 protein-coding unique_peak2_13_90_-0.447842201367126_6.28387353951513_1.03533151715391 chr9 37250184 37251041 + 1.03533151715391 NA intron (NM_001145960, intron 1 of 18) intron (NM_001145960, intron 1 of 18) 5126 NM_020258 56857 Mm.440037 NM_020258 ENSMUSG00000032122 Slc37a2 G3PP|Slc37a1|cI-2|ci2 solute carrier family 37 (glycerol-3-phosphate transporter), member 2 protein-coding common_peak2_55_317_0.200294105919927_8.41303000824432_1.03522517242073 chr17 6640184 6641672 + 1.03522517242073 NA Intergenic Intergenic 14903 NM_001166630 100040563 Mm.457381 NM_001166630 ENSMUSG00000000579 Dynlt1c 100040603|Dynlt1d dynein light chain Tctex-type 1C protein-coding common_peak1_223_2119_-0.0834468658735688_11.0081251165138_1.03500370598431 chr18 24120753 24122503 + 1.03500370598431 NA intron (NM_172625, intron 1 of 4) CpG 191 NM_172625 225280 Mm.258973 NM_172625 ENSMUSG00000047989 Ino80c D030070L09Rik INO80 complex subunit C protein-coding common_peak1_41_217_0.235902630207929_7.88613563988089_1.03488892814839 chr1 127318224 127318840 + 1.03488892814839 NA intron (NM_145128, intron 3 of 17) CT-rich|Low_complexity|Low_complexity 113546 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_41_217_0.235902630207929_7.88613563988089_1.03488892814839-2 chr18 38576107 38576581 + 1.03488892814839 NA Intergenic Intergenic 24924 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty homolog 4 (Drosophila) protein-coding common_peak2_161_1442_-0.101901190311963_10.4439049893352_1.03427401526333 chr5 24907789 24909677 + 1.03427401526333 NA promoter-TSS (NM_001170556) promoter-TSS (NM_001170556) -224 NM_001170556 108099 Mm.33649 NM_145401 ENSMUSG00000028944 Prkag2 2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding common_peak1_24_168_-0.3148642441458_7.24344731420928_1.03383012874762-3 chr2 35677949 35678525 + 1.03383012874762 NA intron (NM_001290641, intron 3 of 15) intron (NM_001290641, intron 3 of 15) -13757 NM_001001602 69601 Mm.29629 NM_001001602 ENSMUSG00000026883 Dab2ip 2310011D08Rik|AI480459|Aip1|mKIAA1743 disabled 2 interacting protein protein-coding common_peak1_24_168_-0.3148642441458_7.24344731420928_1.03383012874762-2 chr19 53329469 53329986 + 1.03383012874762 NA promoter-TSS (NM_001008543) promoter-TSS (NM_001008543) 314 NM_010847 17859 Mm.2154 NM_010847 ENSMUSG00000025025 Mxi1 ENSMUSG00000067085|Gm10197|Mad2|bHLHc11 MAX interactor 1, dimerization protein protein-coding unique_peak2_24_168_-0.3148642441458_7.24344731420928_1.03383012874762 chr5 114891587 114892629 + 1.03383012874762 NA Intergenic MMVL30-int|LTR|ERV1 -4826 NM_011854 23962 Mm.228363 NM_011854 ENSMUSG00000029561 Oasl2 M1204|Mmu-OASL|Oasl 2'-5' oligoadenylate synthetase-like 2 protein-coding common_peak1_24_168_-0.3148642441458_7.24344731420928_1.03383012874762 chr19 5787297 5787827 + 1.03383012874762 NA Intergenic MTD|LTR|ERVL-MaLR 15109 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA unique_peak2_12_83_-0.463508489324184_6.16056317811667_1.03375211243224 chr10 120655553 120656293 + 1.03375211243224 NA Intergenic Intergenic -109809 NR_038000 70874 Mm.427286 NR_038000 ENSMUSG00000044544 4921513I03Rik - RIKEN cDNA 4921513I03 gene ncRNA unique_peak2_12_83_-0.463508489324184_6.16056317811667_1.03375211243224-3 chr6 145894763 145895586 + 1.03375211243224 NA Intergenic Intergenic -29754 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding unique_peak2_12_83_-0.463508489324184_6.16056317811667_1.03375211243224-2 chr12 81780657 81781566 + 1.03375211243224 NA promoter-TSS (NM_177395) promoter-TSS (NM_177395) 59 NM_177395 338372 Mm.35284 NM_177395 ENSMUSG00000042724 Map3k9 E130314H24Rik|Mlk1|Prke1 mitogen-activated protein kinase kinase kinase 9 protein-coding unique_peak2_12_83_-0.463508489324184_6.16056317811667_1.03375211243224-4 chrX 48318353 48319052 + 1.03375211243224 NA Intergenic Intergenic -22656 NM_178782 320376 Mm.210146 NM_178782 ENSMUSG00000036959 Bcorl1 6720425J07Rik|B930011H20Rik BCL6 co-repressor-like 1 protein-coding common_peak1_49_366_-0.207008749520472_8.41613187808298_1.03307486267154 chr8 35430777 35431694 + 1.03307486267154 NA Intergenic (TTTTG)n|Simple_repeat|Simple_repeat 55494 NM_177741 244416 Mm.247126 NM_177741 ENSMUSG00000046794 Ppp1r3b 6430576E21|AW821953|GL|PTG protein phosphatase 1, regulatory (inhibitor) subunit 3B protein-coding common_peak1_91_741_-0.143589950154579_9.46348040154351_1.03298278170801 chr10 117905500 117906649 + 1.03298278170801 NA Intergenic Intergenic -19385 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_91_741_-0.143589950154579_9.46348040154351_1.03298278170801 chr1 120098641 120102205 + 1.03298278170801 NA Intergenic PB1D7|SINE|Alu 20496 NM_001037999 13167 Mm.2785 NM_007830 ENSMUSG00000026385 Dbi ACBD1|Acbp|EP|endozepine diazepam binding inhibitor protein-coding common_peak2_205_1917_-0.087226810055034_10.8617735999906_1.03297685642187 chr1 133814961 133817710 + 1.03297685642187 NA Intergenic Intergenic -62588 NM_213616 381290 Mm.188617 NM_213616 ENSMUSG00000026463 Atp2b4 Pmca4 ATPase, Ca++ transporting, plasma membrane 4 protein-coding common_peak1_190_1753_-0.0920615264579379_10.7304022692158_1.03257737444813 chr7 4337651 4339680 + 1.03257737444813 NA intron (NM_010746, intron 3 of 6) intron (NM_010746, intron 3 of 6) 941 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak1_327_3049_0.0666866712868845_11.6079368629811_1.0323981369741 chr2 49450567 49452984 + 1.0323981369741 NA 5' UTR (NM_172663, exon 1 of 14) 5' UTR (NM_172663, exon 1 of 14) 289 NM_172663 227867 Mm.29167 NM_172663 ENSMUSG00000069495 Epc2 5830499L14|D2Ertd694e enhancer of polycomb homolog 2 (Drosophila) protein-coding common_peak2_62_477_-0.179257648028965_8.81123798396627_1.03215433737146 chr5 143112119 143113130 + 1.03215433737146 NA intron (NM_207110, intron 1 of 16) CpG 396 NM_080561 108086 Mm.381440 NM_080561 ENSMUSG00000045078 Rnf216 2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1 ring finger protein 216 protein-coding common_peak2_26_119_0.315316971231076_7.06454908122406_1.03178643303552 chr3 152431747 152432883 + 1.03178643303552 NA intron (NM_001287139, intron 4 of 13) B1_Mur4|SINE|Alu 35631 NM_001287139 108946 Mm.379292 NM_198416 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 protein-coding common_peak1_26_119_0.315316971231076_7.06454908122406_1.03178643303552 chr6 114899381 114900027 + 1.03178643303552 NA intron (NM_177683, intron 1 of 4) ORR1E|LTR|ERVL-MaLR 22048 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_225_1908_0.083530421954821_10.9403665983813_1.03167920162965 chr15 100038599 100039839 + 1.03167920162965 NA intron (NM_001159361, intron 1 of 37) CpG 555 NM_001159361 239667 Mm.243658 NM_172819 ENSMUSG00000023026 Dip2b 4932422C22|AI317237|AI854602|mKIAA1463 disco interacting protein 2 homolog B protein-coding common_peak1_38_196_0.250891630151484_7.74749763453212_1.0311928517966 chrX 85867721 85868575 + 1.0311928517966 NA Intergenic ORR1D2|LTR|ERVL-MaLR -2125 NM_001163539 71398 Mm.185296 NM_001163539 ENSMUSG00000025058 5430427O19Rik - RIKEN cDNA 5430427O19 gene protein-coding common_peak1_222_1876_0.0842709391235292_10.9163484043926_1.03110104134839 chr15 76511032 76513430 + 1.03110104134839 NA promoter-TSS (NM_010046) promoter-TSS (NM_010046) -413 NM_010046 13350 Mm.22633 NM_010046 ENSMUSG00000022555 Dgat1 ARAT|C75990|D15Ertd23e|Dgat diacylglycerol O-acyltransferase 1 protein-coding common_peak1_89_722_-0.145060888200129_9.42532139285105_1.03104303295048 chr10 92721660 92722561 + 1.03104303295048 NA intron (NM_008682, intron 1 of 14) CpG 308 NM_008682 17997 Mm.2998 NM_008682 ENSMUSG00000019988 Nedd1 - neural precursor cell expressed, developmentally down-regulated gene 1 protein-coding common_peak1_44_324_-0.218117270351184_8.23523727274022_1.03093418080935 chr3 32365269 32366176 + 1.03093418080935 NA promoter-TSS (NM_009517) promoter-TSS (NM_009517) -57 NM_009517 22401 Mm.35705 NM_009517 ENSMUSG00000027663 Zmat3 Wig1 zinc finger matrin type 3 protein-coding common_peak1_118_844_0.124264839070097_9.7849399507046_1.03070404336183 chr19 53390810 53391587 + 1.03070404336183 NA promoter-TSS (NM_172429) promoter-TSS (NM_172429) -625 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak1_19_131_-0.353259891727677_6.86776417349462_1.03031222259992 chr10 14034329 14034788 + 1.03031222259992 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 68179 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding unique_peak2_19_131_-0.353259891727677_6.86776417349462_1.03031222259992 chr1 88647274 88648375 + 1.03031222259992 NA Intergenic (CAA)n|Simple_repeat|Simple_repeat 54367 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_19_131_-0.353259891727677_6.86776417349462_1.03031222259992-2 chr11 95747923 95748374 + 1.03031222259992 NA promoter-TSS (NM_201609) promoter-TSS (NM_201609) -919 NM_201609 268469 Mm.389038 NM_201609 ENSMUSG00000075595 Zfp652 9530033F24Rik|ZNF652 zinc finger protein 652 protein-coding common_peak2_258_2266_0.0767510847360953_11.1849442181088_1.02968216795239 chr5 86803546 86805645 + 1.02968216795239 NA intron (NM_177680, intron 1 of 16) CpG 105 NM_177680 231386 Mm.196325 NM_177680 ENSMUSG00000035851 Ythdc1 A730098D12Rik|C80342|mKIAA1966 YTH domain containing 1 protein-coding common_peak2_210_1749_0.0874601324192721_10.8168692729293_1.02938055285934 chr11 106534432 106537813 + 1.02938055285934 NA intron (NM_198292, intron 5 of 11) intron (NM_198292, intron 5 of 11) 35131 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA common_peak1_59_348_0.188185517574407_8.54117598499686_1.029281045121 chr4 135946303 135947059 + 1.029281045121 NA intron (NM_008254, intron 1 of 8) CpG 228 NM_008254 15356 Mm.482102 NM_008254 ENSMUSG00000028672 Hmgcl AW476067|HL 3-hydroxy-3-methylglutaryl-Coenzyme A lyase protein-coding common_peak1_75_473_0.164845576871345_8.97116603733393_1.02900824530947 chr7 75612586 75613799 + 1.02900824530947 NA intron (NM_029332, intron 7 of 36) intron (NM_029332, intron 7 of 36) 157658 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak2_445_4482_0.0548474010900701_12.1576724845957_1.02873988926698 chr15 100704118 100709633 + 1.02873988926698 NA intron (NM_172451, intron 4 of 11) intron (NM_172451, intron 4 of 11) 13602 NM_001161768 207839 Mm.22969 NM_172451 ENSMUSG00000037280 Galnt6 4632410F13|AW047994|GalNAc-T6 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 protein-coding common_peak1_321_2980_0.0670285645541693_11.5750949422683_1.02868038600496 chr14 34309702 34311835 + 1.02868038600496 NA promoter-TSS (NM_029389) promoter-TSS (NM_029389) 41 NM_008133 14661 Mm.10600 NM_008133 ENSMUSG00000021794 Glud1 AI118167|Gdh-X|Glud|Gludl glutamate dehydrogenase 1 protein-coding common_peak1_143_1254_-0.108949353406398_10.2389969721349_1.02861436401201 chr11 3647993 3649184 + 1.02861436401201 NA promoter-TSS (NM_001159288) promoter-TSS (NM_001159288) 226 NR_002321 544752 Mm.390314 NR_002321 ENSMUSG00000056579 Tug1 AI316828 taurine upregulated gene 1 ncRNA common_peak1_289_2613_0.071337786781811_11.3877123191863_1.02854904714053 chr9 82973356 82976312 + 1.02854904714053 NA intron (NM_001081216, intron 3 of 39) GC_rich|Low_complexity|Low_complexity 655 NM_001081216 83946 Mm.221688 NM_031879 ENSMUSG00000032253 Phip 2810004D21Rik|4632404O06Rik|Ndrp|Wdr11 pleckstrin homology domain interacting protein protein-coding unique_peak2_10_70_-0.516561687997086_5.89146627550614_1.02824296742569 chr11 114888571 114889155 + 1.02824296742569 NA Intergenic B2_Mm2|SINE|B2 -1178 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding unique_peak2_10_70_-0.516561687997086_5.89146627550614_1.02824296742569-2 chr8 120406123 120406667 + 1.02824296742569 NA Intergenic Intergenic -82471 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_63_378_0.183423847326788_8.65776596183449_1.02822322398851 chr5 113835867 113837798 + 1.02822322398851 NA Intergenic Intergenic -6331 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak2_111_781_0.128764575083284_9.675407084849_1.02811074013842 chr8 84989228 84991085 + 1.02811074013842 NA promoter-TSS (NM_133255) promoter-TSS (NM_133255) -439 NM_133255 170833 Mm.247775 NM_133255 ENSMUSG00000052566 Hook2 A630054I03Rik hook microtubule tethering protein 2 protein-coding common_peak2_314_2899_0.0678775619278049_11.5357759658662_1.0280059085655 chr3 97928958 97935223 + 1.0280059085655 NA intron (NM_001033779, intron 1 of 1) intron (NM_001033779, intron 1 of 1) 1917 NM_001033779 433632 Mm.212421 NM_001033779 Gm5544 EG433632 predicted gene 5544 protein-coding common_peak2_226_1919_0.0830541513792138_10.9484176712981_1.02761170038895 chr6 71543317 71544979 + 1.02761170038895 NA intron (NM_025783, intron 1 of 5) CpG 294 NM_025783 66700 Mm.181278 NM_025783 ENSMUSG00000053119 Chmp3 25.1|4921505F14Rik|9130011K15Rik|CGI-49|D6Ertd286e|NEDF|Vps24 charged multivesicular body protein 3 protein-coding common_peak1_43_231_0.228429058752735_7.97219552450394_1.02753058390228 chr9 119743731 119744721 + 1.02753058390228 NA Intergenic LTR33|LTR|ERVL -25194 NM_001205321 20264 Mm.247042 NM_009134 ENSMUSG00000034533 Scn10a Nav1.8|PN3|SNS sodium channel, voltage-gated, type X, alpha protein-coding common_peak1_71_441_0.170007424853948_8.8729062718184_1.02744668469895 chr10 19520991 19522699 + 1.02744668469895 NA Intergenic Intergenic -70113 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_35_176_0.263692122976026_7.59945161157101_1.02739083492185 chr15 3171557 3172185 + 1.02739083492185 NA Intergenic Intergenic -98896 NM_001042613 20363 Mm.392203 NM_009155 ENSMUSG00000064373 Selenop AU018766|D15Ucla1|Se-P|Sepp1|selp selenoprotein P protein-coding common_peak2_69_425_0.173348405484052_8.82138382296786_1.02730110252234 chr4 101225731 101227937 + 1.02730110252234 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 38448 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_88_581_0.148143025855905_9.25894685583624_1.02683709461663 chr12 112627917 112630191 + 1.02683709461663 NA intron (NM_007421, intron 2 of 12) intron (NM_007421, intron 2 of 12) 9007 NM_007421 11565 Mm.3440 NM_007421 ENSMUSG00000011148 Adssl1 AI528595|Adss|Adss1 adenylosuccinate synthetase like 1 protein-coding common_peak1_17_68_0.396160905094498_6.30660490932542_1.02602930452879-2 chr15 27679359 27679729 + 1.02602930452879 NA intron (NM_001242424, intron 1 of 8) intron (NM_001242424, intron 1 of 8) 1998 NM_001242424 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_17_68_0.396160905094498_6.30660490932542_1.02602930452879-6 chr7 130646273 130646811 + 1.02602930452879 NA intron (NM_001004468, intron 3 of 21) intron (NM_001004468, intron 3 of 21) -46014 NM_021314 57752 Mm.86322 NM_021314 ENSMUSG00000030852 Tacc2 mKIAA4180 transforming, acidic coiled-coil containing protein 2 protein-coding common_peak2_17_68_0.396160905094498_6.30660490932542_1.02602930452879-3 chr7 81004990 81005590 + 1.02602930452879 NA intron (NM_178707, intron 1 of 9) intron (NM_178707, intron 1 of 9) 11606 NM_178707 233410 Mm.29525 NM_178707 ENSMUSG00000005621 Zfp592 8430405N24|A730014M16Rik|Znf592|mKIAA0211 zinc finger protein 592 protein-coding common_peak2_17_68_0.396160905094498_6.30660490932542_1.02602930452879 chr12 16509212 16509756 + 1.02602930452879 NA Intergenic Intergenic 80286 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak1_17_68_0.396160905094498_6.30660490932542_1.02602930452879-5 chr7 30430056 30430536 + 1.02602930452879 NA Intergenic MTC|LTR|ERVL-MaLR 6992 NM_172142 243910 Mm.386878 NM_172142 ENSMUSG00000036931 Nfkbid IkappaBNS nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta protein-coding common_peak2_17_68_0.396160905094498_6.30660490932542_1.02602930452879-2 chr13 107830699 107831353 + 1.02602930452879 NA intron (NM_145456, intron 2 of 14) intron (NM_145456, intron 2 of 14) 59038 NM_145456 67263 Mm.490418 NM_145456 ENSMUSG00000032846 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak1_17_68_0.396160905094498_6.30660490932542_1.02602930452879-3 chr18 34379621 34380138 + 1.02602930452879 NA Intergenic MTD|LTR|ERVL-MaLR -6464 NM_007874 13476 Mm.280075 NM_007874 ENSMUSG00000005873 Reep5 AI324241|AU022809|AW495741|DP1/TB2|Dp1|R74856|TB2/DP1 receptor accessory protein 5 protein-coding common_peak1_17_68_0.396160905094498_6.30660490932542_1.02602930452879-4 chr18 80700156 80700563 + 1.02602930452879 NA intron (NM_198429, intron 1 of 9) intron (NM_198429, intron 1 of 9) 7814 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_17_68_0.396160905094498_6.30660490932542_1.02602930452879 chr11 100412189 100412595 + 1.02602930452879 NA intron (NM_176830, intron 4 of 7) intron (NM_176830, intron 4 of 7) 2427 NM_176830 66180 Mm.4940 NM_176830 ENSMUSG00000006931 P3h4 1110036O03Rik|AI413214|Leprel4|Sc65 prolyl 3-hydroxylase family member 4 (non-enzymatic) protein-coding common_peak1_101_835_-0.133076043767071_9.64082111019735_1.02587718746776-2 chr13 98691921 98693762 + 1.02587718746776 NA intron (NM_001025606, intron 1 of 3) intron (NM_001025606, intron 1 of 3) 1990 NM_001025606 380863 Mm.28264 NM_001025606 ENSMUSG00000052485 Tmem171 Gm905 transmembrane protein 171 protein-coding common_peak1_101_835_-0.133076043767071_9.64082111019735_1.02587718746776 chr1 171060470 171061552 + 1.02587718746776 NA Intergenic Intergenic -1608 NM_010188 14131 Mm.22119 NM_010188 ENSMUSG00000059498 Fcgr3 CD16 Fc receptor, IgG, low affinity III protein-coding unique_peak2_22_96_0.338547961906382_6.76918682314032_1.02570497493437-2 chr14 53801868 53802628 + 1.02570497493437 NA Intergenic Intergenic 451681 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak2_22_96_0.338547961906382_6.76918682314032_1.02570497493437-3 chr9 65010833 65011542 + 1.02570497493437 NA intron (NM_021345, intron 1 of 10) B1_Mm|SINE|Alu 10530 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak1_22_96_0.338547961906382_6.76918682314032_1.02570497493437 chr1 34471907 34472278 + 1.02570497493437 NA intron (NM_011206, intron 11 of 14) intron (NM_011206, intron 11 of 14) 12346 NM_011206 19253 Mm.361 NM_011206 ENSMUSG00000026126 Ptpn18 FLP1|HSCF|PTP-HSCF|PTP-K1|Ptpk1 protein tyrosine phosphatase, non-receptor type 18 protein-coding unique_peak2_22_96_0.338547961906382_6.76918682314032_1.02570497493437 chr1 133033411 133034227 + 1.02570497493437 NA Intergenic Intergenic -3232 NM_001302802 17248 Mm.426531 NM_008575 ENSMUSG00000054387 Mdm4 4933417N07Rik|AA414968|AL023055|AU018793|AU021806|C85810|Mdmx transformed mouse 3T3 cell double minute 4 protein-coding common_peak2_36_260_-0.248122345358475_7.90384482389065_1.02569422739108 chr2 18916176 18918134 + 1.02569422739108 NA intron (NM_008845, intron 1 of 9) Charlie7|DNA|hAT-Charlie 80966 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha protein-coding common_peak2_23_160_-0.317141410022522_7.17234617310336_1.02449203946321 chr4 133649573 133650439 + 1.02449203946321 NA Intergenic LTR50|LTR|ERVL -16577 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak1_23_160_-0.317141410022522_7.17234617310336_1.02449203946321-2 chr3 142493728 142494200 + 1.02449203946321 NA Intergenic Intergenic -2970 NM_153564 229898 Mm.459245 NM_153564 ENSMUSG00000105504 Gbp5 5330409J06Rik|Gbp5a guanylate binding protein 5 protein-coding common_peak1_23_160_-0.317141410022522_7.17234617310336_1.02449203946321-5 chrX 108834583 108835058 + 1.02449203946321 NA promoter-TSS (NM_001081477) promoter-TSS (NM_001081477) 342 NR_015493 69964 Mm.160066 NR_015493 ENSMUSG00000086629 2810403D21Rik 1810022M18Rik|4632410B05Rik|AU017716 RIKEN cDNA 2810403D21 gene ncRNA common_peak1_23_160_-0.317141410022522_7.17234617310336_1.02449203946321-4 chr8 124290984 124291614 + 1.02449203946321 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 59905 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak2_23_160_-0.317141410022522_7.17234617310336_1.02449203946321 chr7 30050708 30051510 + 1.02449203946321 NA intron (NM_011748, intron 1 of 5) CpG 287 NM_011748 243906 Mm.347644 NM_011748 ENSMUSG00000053985 Zfp14 4732429I09Rik|Krox-9|Zfp-14|mKIAA1559 zinc finger protein 14 protein-coding common_peak1_23_160_-0.317141410022522_7.17234617310336_1.02449203946321-3 chr6 67366684 67367346 + 1.02449203946321 NA intron (NM_008354, intron 1 of 15) intron (NM_008354, intron 1 of 15) 9122 NM_008354 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak1_23_160_-0.317141410022522_7.17234617310336_1.02449203946321 chr3 30863516 30863898 + 1.02449203946321 NA intron (NM_001286994, intron 1 of 3) B4A|SINE|B4 7757 NM_001286994 71862 Mm.272019 NM_027965 ENSMUSG00000037661 Gpr160 1700025D19Rik|GPCR150 G protein-coupled receptor 160 protein-coding common_peak1_81_647_-0.151794426632842_9.2639527895682_1.02447460905602 chr17 13439799 13441013 + 1.02447460905602 NA Intergenic RMER10A|LTR|ERVL -81050 NR_030763 272667 Mm.444718 NR_030763 ENSMUSG00000079711 Smok4a 4930513D10Rik|Smok2c sperm motility kinase 4A pseudo common_peak1_180_1644_-0.0946645531462416_10.6365395920495_1.02445755964406 chr2 131209555 131211059 + 1.02445755964406 NA promoter-TSS (NM_027129) promoter-TSS (NM_027129) -53 NM_001291032 69596 Mm.2937 NM_027129 ENSMUSG00000068264 Ap5s1 0610038L13Rik|2310035K24Rik|AW060727|sigma5 adaptor-related protein 5 complex, sigma 1 subunit protein-coding common_peak2_33_236_-0.258594676737732_7.75944591052939_1.02444587813055 chr19 33101020 33102233 + 1.02444587813055 NA Intergenic (GA)n|Simple_repeat|Simple_repeat 290669 NM_001167818 67795 Mm.204591 NM_001146342 ENSMUSG00000071573 Rnls 6530404N21Rik|AI452315|AW060440|C10orf59 renalase, FAD-dependent amine oxidase protein-coding common_peak1_325_3317_-0.0656414158481375_11.6632774630318_1.02443625492493 chr18 35936593 35940105 + 1.02443625492493 NA Intergenic L2b|LINE|L2 -26481 NM_028707 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding common_peak2_29_138_0.289715359874195_7.26379875266061_1.02427853571067 chr12 112976380 112977154 + 1.02427853571067 NA exon (NM_001145900, exon 2 of 5) exon (NM_001145900, exon 2 of 5) 204 NM_201646 399566 Mm.440140 NM_201646 ENSMUSG00000002803 Btbd6 - BTB (POZ) domain containing 6 protein-coding common_peak1_123_1051_-0.119012162185284_9.97941290819966_1.02404946260008 chr4 152196554 152197826 + 1.02404946260008 NA intron (NM_001146057, intron 1 of 8) intron (NM_001146057, intron 1 of 8) -2654 NM_001146058 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak2_193_1573_0.0917308490422784_10.6660852500286_1.02381939909816 chr10 29360752 29362639 + 1.02381939909816 NA intron (NM_001110198, intron 1 of 3) CpG 747 NM_026518 68031 Mm.28930 NM_026518 ENSMUSG00000038876 Rnf146 2610509H23Rik|Iduna ring finger protein 146 protein-coding common_peak2_92_750_-0.141852376626682_9.48174290920093_1.02376863696273 chr19 38835924 38837681 + 1.02376863696273 NA exon (NM_145952, exon 1 of 13) exon (NM_145952, exon 1 of 13) 223 NM_145952 209478 Mm.391153 NM_145952 ENSMUSG00000048720 Tbc1d12 BC033574 TBC1D12: TBC1 domain family, member 12 protein-coding common_peak2_30_213_-0.27478478166684_7.60407459556773_1.0236552427728 chr12 8351260 8352028 + 1.0236552427728 NA Intergenic Intergenic 38211 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding common_peak1_30_213_-0.27478478166684_7.60407459556773_1.0236552427728 chr2 166472031 166472492 + 1.0236552427728 NA Intergenic MLT2B3|LTR|ERVL 24810 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak1_30_213_-0.27478478166684_7.60407459556773_1.0236552427728-2 chrX 12135576 12136139 + 1.0236552427728 NA intron (NR_045434, intron 3 of 3) CpG 24489 NR_045434 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_190_1543_0.0919144687187146_10.6384142716274_1.02354984005095 chr5 139196589 139198132 + 1.02354984005095 NA Intergenic Intergenic -3277 NM_001256115 77053 Mm.210845 NM_024451 ENSMUSG00000036817 Sun1 4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810 Sad1 and UNC84 domain containing 1 protein-coding common_peak1_32_157_0.273539199483777_7.44055034791899_1.02351016588492 chr5 37062508 37063167 + 1.02351016588492 NA intron (NM_178394, intron 1 of 12) intron (NM_178394, intron 1 of 12) 11980 NM_178394 76071 Mm.85280 NM_178394 ENSMUSG00000063646 Jakmip1 5830437M04Rik|C330021K24Rik|Gababrbp|Marlin-1 janus kinase and microtubule interacting protein 1 protein-coding common_peak1_136_1182_-0.11189680180493_10.1522859574373_1.02302718620844 chr1 106171616 106173073 + 1.02302718620844 NA promoter-TSS (NR_040630) promoter-TSS (NR_040630) 475 NM_133821 98432 Mm.24115 NM_133821 ENSMUSG00000044340 Phlpp1 AI836256|Phlpp|Plekhe1|SCOP|mKIAA0606 PH domain and leucine rich repeat protein phosphatase 1 protein-coding common_peak2_259_2530_-0.075352649405076_11.2678154674081_1.02246955224331 chr13 93760612 93767008 + 1.02246955224331 NA Intergenic B1_Mus1|SINE|Alu -7869 NM_009712 11881 Mm.300178 NM_009712 ENSMUSG00000042082 Arsb 1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B protein-coding common_peak1_84_548_0.150979508847293_9.17615209342885_1.02219860529557 chr8 105991015 105992220 + 1.02219860529557 NA intron (NM_176913, intron 1 of 11) intron (NM_176913, intron 1 of 11) 156 NM_001301204 319446 Mm.248357 NM_176913 ENSMUSG00000053687 Dpep2 F630103D06Rik|MBD-2 dipeptidase 2 protein-coding common_peak1_380_3681_0.060071298977423_11.8763095608386_1.02194257955049 chr9 59485117 59487570 + 1.02194257955049 NA promoter-TSS (NM_019927) promoter-TSS (NM_019927) 31 NM_019927 23806 Mm.305925 NM_019927 ENSMUSG00000025234 Arih1 AU021774|Ari|Ari1|Hari|Hhari|Ubch7bp|Uip77 ariadne RBR E3 ubiquitin protein ligase 1 protein-coding common_peak2_218_1834_0.0848891948083388_10.8840089451347_1.02174261168112 chr9 20491881 20494009 + 1.02174261168112 NA promoter-TSS (NM_001310742) promoter-TSS (NM_001310742) -199 NM_001110309 235028 Mm.297660 NM_146221 ENSMUSG00000059475 Zfp426 2900057C04Rik|KRAB1|Zfo61|Zfp68-rs1|Znf426|mKIAA4237 zinc finger protein 426 protein-coding common_peak2_111_932_-0.125943898461122_9.8027613216212_1.02171532611044 chr11 116388574 116390537 + 1.02171532611044 NA intron (NM_027258, intron 2 of 18) IAPLTR1_Mm|LTR|ERVK 23477 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak2_111_932_-0.125943898461122_9.8027613216212_1.02171532611044-2 chr12 118375696 118378190 + 1.02171532611044 NA Intergenic Intergenic -75503 NM_001166385 20688 Mm.34699 NM_009239 ENSMUSG00000025323 Sp4 5730497N03Rik|HF-1b|HF1-b trans-acting transcription factor 4 protein-coding unique_peak2_48_357_-0.206939540353572_8.38034600708747_1.02078412187897 chr1 170270091 170271544 + 1.02078412187897 NA Intergenic Intergenic -6507 NM_012009 26904 Mm.57009 NM_012009 ENSMUSG00000102418 Sh2d1b1 EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b SH2 domain containing 1B1 protein-coding common_peak1_48_357_-0.206939540353572_8.38034600708747_1.02078412187897 chr8 85036560 85037460 + 1.02078412187897 NA promoter-TSS (NM_001122843) promoter-TSS (NM_001122843) 95 NM_145390 212999 Mm.220357 NM_145390 ENSMUSG00000031691 Tnpo2 1110034O24Rik|AA414969|AI464345|AI852433|IPO3|Knpb2b|Kpnb2b|TRN2 transportin 2 (importin 3, karyopherin beta 2b) protein-coding common_peak1_100_684_0.136888015757568_9.48840418572667_1.02074861160985 chr12 117820932 117822365 + 1.02074861160985 NA Intergenic Intergenic -22213 NM_146040 217946 Mm.281149 NM_146040 ENSMUSG00000021175 Cdca7l BC006933|JPO2 cell division cycle associated 7 like protein-coding common_peak1_121_1031_-0.120095493189925_9.95117950882829_1.02041429586029 chr17 24454287 24455299 + 1.02041429586029 NA intron (NM_001301784, intron 1 of 13) CpG 599 NM_001301784 13560 Mm.163132 NM_007893 ENSMUSG00000024137 E4f1 p120E4F|phi-AP3 E4F transcription factor 1 protein-coding common_peak2_73_574_-0.161022183433971_9.08690705411475_1.01989652405291 chr7 13278075 13279526 + 1.01989652405291 NA promoter-TSS (NM_001083188) promoter-TSS (NM_001083188) -26 NM_010715 16881 Mm.288179 NM_010715 ENSMUSG00000056394 Lig1 AL033288|LigI ligase I, DNA, ATP-dependent protein-coding common_peak1_206_1708_0.0877931547239381_10.7828332590381_1.01987280271693 chr13 43480840 43481980 + 1.01987280271693 NA promoter-TSS (NM_019930) promoter-TSS (NM_019930) -437 NM_019930 56705 Mm.148781 NM_019930 ENSMUSG00000038546 Ranbp9 IBAP-1|Ibap1|RanBPM RAN binding protein 9 protein-coding common_peak2_63_485_-0.1753346181079_8.83714519455183_1.01935407872674 chr14 99099037 99100471 + 1.01935407872674 NA promoter-TSS (NM_028315) promoter-TSS (NM_028315) 16 NM_028315 72662 Mm.163339 NM_028315 ENSMUSG00000033166 Dis3 2810028N01Rik DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease protein-coding common_peak2_71_556_-0.163623533094652_9.0397217507927_1.01924989160905 chr16 4911499 4913973 + 1.01924989160905 NA intron (NM_029657, intron 4 of 16) intron (NM_029657, intron 4 of 16) -26375 NM_001316715 66911 Mm.428698 NM_025839 ENSMUSG00000022516 Nudt16l1 1110001K21Rik|5330437I08Rik|Sdos nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 protein-coding common_peak1_18_124_-0.365420081265197_6.78307424402949_1.01911373693729 chr2 78972657 78973043 + 1.01911373693729 NA Intergenic Intergenic 103803 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_18_124_-0.365420081265197_6.78307424402949_1.01911373693729-2 chr4 134102583 134102957 + 1.01911373693729 NA intron (NM_026257, intron 1 of 14) CpG 187 NM_026257 67586 Mm.282029 NM_026257 ENSMUSG00000012126 Ubxn11 4930506L07Rik|D4Bwg1540e|Soc|Soci|Ubxd5 UBX domain protein 11 protein-coding common_peak1_18_124_-0.365420081265197_6.78307424402949_1.01911373693729-3 chr4 156203262 156203720 + 1.01911373693729 NA non-coding (NR_030671, exon 1 of 1) non-coding (NR_030671, exon 1 of 1) 207 NR_030671 100382 Mm.461024 NR_030671 AW011738 - expressed sequence AW011738 ncRNA unique_peak2_18_124_-0.365420081265197_6.78307424402949_1.01911373693729 chr17 49402628 49403521 + 1.01911373693729 NA Intergenic Intergenic -25290 NM_028464 56738 Mm.22256 NM_020042 ENSMUSG00000064120 Mocs1 3110045D15Rik|AI043170|AW536397 molybdenum cofactor synthesis 1 protein-coding common_peak1_69_538_-0.166083437042616_8.9910997442312_1.0189858256427 chr18 12740862 12741941 + 1.0189858256427 NA promoter-TSS (NM_027687) promoter-TSS (NM_027687) 46 NM_027687 71132 Mm.179740 NM_027687 ENSMUSG00000024430 Cabyr 1700016C01Rik|4933421A18Rik|CBP86|FSP-2 calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) protein-coding common_peak1_38_275_-0.235581007170308_7.99073395319301_1.01894801651611 chr5 122317573 122318319 + 1.01894801651611 NA intron (NM_177242, intron 4 of 5) intron (NM_177242, intron 4 of 5) 33548 NM_177242 320717 Mm.489670 NM_177242 ENSMUSG00000038582 Pptc7 9130017A15Rik|AA672638|AI848390|TA-PP2C PTC7 protein phosphatase homolog protein-coding common_peak2_38_275_-0.235581007170308_7.99073395319301_1.01894801651611 chr5 8797754 8799218 + 1.01894801651611 NA intron (NM_011075, intron 1 of 27) CpG 339 NM_011075 18669 Mm.146649 NM_011075 ENSMUSG00000028970 Abcb1b Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr ATP-binding cassette, sub-family B (MDR/TAP), member 1B protein-coding common_peak1_568_6076_0.0469657048922159_12.5926264289912_1.01827711212332 chr5 140593564 140598664 + 1.01827711212332 NA Intergenic Intergenic -11227 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak2_165_1291_0.10072782566078_10.3857542675243_1.01818537775161 chr7 120702801 120706202 + 1.01818537775161 NA intron (NM_001164580, intron 1 of 2) intron (NM_001164580, intron 1 of 2) 26881 NM_001164580 233812 Mm.276479 NM_001164580 ENSMUSG00000046096 BC030336 - cDNA sequence BC030336 protein-coding common_peak2_222_1877_0.083502526300629_10.9167326108041_1.01816158731988 chr2 119593552 119597932 + 1.01816158731988 NA intron (NR_027832, intron 1 of 2) intron (NR_027832, intron 1 of 2) 1446 NR_015473 66602 Mm.379181 NR_015473 ENSMUSG00000085438 1700020I14Rik 1190006L01Rik|4933437I03Rik|AI451541|AI585852|AW538376|AW558897|Cyrano RIKEN cDNA 1700020I14 gene ncRNA common_peak1_78_498_0.159203085776056_9.04249754822529_1.01788691370454 chr3 89391424 89392631 + 1.01788691370454 NA non-coding (NR_040403, exon 1 of 2) non-coding (NR_040403, exon 1 of 2) 163 NR_040403 545539 Mm.393389 NR_040403 ENSMUSG00000074466 Gm15417 ENSMUSG00000074466|OTTMUSG00000021274 predicted gene 15417 ncRNA common_peak1_129_1111_-0.115414241204254_10.0612339521214_1.01786131700439 chr4 155201020 155202354 + 1.01786131700439 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 20848 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_153_1357_-0.10393391228531_10.3553008081021_1.01774147238914 chr18 77064393 77066987 + 1.01774147238914 NA promoter-TSS (NM_001164168) promoter-TSS (NM_001164168) 10 NM_001164168 17344 Mm.6370 NM_008602 ENSMUSG00000025423 Pias2 6330408K17Rik|AI462206|ARIP3|AU018068|Dib|Miz1|PIASxalpha|PIASxb|PIASxbeta|SIZ2 protein inhibitor of activated STAT 2 protein-coding common_peak1_98_667_0.137750171340112_9.45257937814411_1.01749425562958 chr1 128786233 128788058 + 1.01749425562958 NA Intergenic Intergenic -194846 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_47_259_0.218019966249997_8.13137779615345_1.0174280685545 chr9 45253892 45254910 + 1.0174280685545 NA 3' UTR (NM_008348, exon 7 of 7) 3' UTR (NM_008348, exon 7 of 7) 12306 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak1_402_3949_0.0580501818573129_11.9766620288805_1.01679457510562 chr10 127642115 127644806 + 1.01679457510562 NA intron (NM_009284, intron 1 of 21) intron (NM_009284, intron 1 of 21) 474 NM_009284 20852 Mm.121721 NM_009284 ENSMUSG00000002147 Stat6 - signal transducer and activator of transcription 6 protein-coding common_peak2_137_1192_-0.111170696262077_10.1647929795642_1.01673772802938 chr7 44891741 44893209 + 1.01673772802938 NA promoter-TSS (NM_029365) promoter-TSS (NM_029365) -109 NM_029365 75613 Mm.157778 NM_029365 ENSMUSG00000002968 Med25 2610034E13Rik|2610529E18Rik|ESTM2 mediator complex subunit 25 protein-coding common_peak1_329_3074_0.065667150611592_11.6192042704198_1.01672585483719 chr17 26507311 26509709 + 1.01672585483719 NA promoter-TSS (NM_013642) promoter-TSS (NM_013642) -38 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding unique_peak2_26_182_-0.293492271444448_7.36895370256182_1.0166392273913 chr10 41524499 41525847 + 1.0166392273913 NA intron (NM_016898, intron 4 of 5) intron (NM_016898, intron 4 of 5) 5673 NM_016898 53599 Mm.269815 NM_016898 ENSMUSG00000019818 Cd164 A115|A24|AA589639|AW540279|MGC-24|MSSP CD164 antigen protein-coding unique_peak2_26_182_-0.293492271444448_7.36895370256182_1.0166392273913-2 chr17 47542494 47543888 + 1.0166392273913 NA intron (NM_001081635, intron 1 of 6) RSINE1|SINE|B4 38140 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_26_182_-0.293492271444448_7.36895370256182_1.0166392273913 chr3 96246792 96247296 + 1.0166392273913 NA TTS (NM_178212) TTS (NM_178212) 344 NM_054045 97114 Mm.358797 NM_054045 ENSMUSG00000081058 Hist2h3c2 H3-614|H3.2-614|Hist2h3c2-ps|Hist2h3ca1|M32461 histone cluster 2, H3c2 protein-coding common_peak2_485_4991_0.0516866914702696_12.3112455645974_1.0164689353882 chr7 102245039 102251760 + 1.0164689353882 NA intron (NM_019566, intron 1 of 1) intron (NM_019566, intron 1 of 1) 1719 NM_019566 56212 Mm.259795 NM_019566 ENSMUSG00000073982 Rhog 2810426G09Rik|Arhg|Sid10750 ras homolog family member G protein-coding common_peak2_171_1351_0.0980723563444794_10.4499156144544_1.01640590554159 chr18 84292714 84295563 + 1.01640590554159 NA intron (NM_001033341, intron 8 of 8) intron (NM_001033341, intron 8 of 8) 205980 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding common_peak2_89_590_0.145776628573456_9.27990263446426_1.01632571322116 chr11 117265611 117267703 + 1.01632571322116 NA intron (NM_001113487, intron 1 of 10) CpG 411 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_89_590_0.145776628573456_9.27990263446426_1.01632571322116 chr5 139200548 139201282 + 1.01632571322116 NA intron (NM_024451, intron 1 of 22) CpG 278 NM_001256117 77053 Mm.210845 NM_024451 ENSMUSG00000036817 Sun1 4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810 Sad1 and UNC84 domain containing 1 protein-coding common_peak1_311_2865_0.0679574889047831_11.5188016387145_1.01595488139604 chr7 7297911 7300334 + 1.01595488139604 NA promoter-TSS (NM_001302387) promoter-TSS (NM_001302387) 231 NR_049193 100885832 NR_049193 ENSMUSG00000093599 Mir5620 Gm23572|mir-5620|mmu-mir-5620 microRNA 5620 ncRNA common_peak1_21_90_0.352003102495255_6.68379619144632_1.01551430626023-2 chr4 44044046 44044637 + 1.01551430626023 NA intron (NM_001190414, intron 7 of 11) intron (NM_001190414, intron 7 of 11) 28332 NM_001190414 50798 Mm.256718 NM_015828 ENSMUSG00000028479 Gne 2310066H07Rik|DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding unique_peak2_21_90_0.352003102495255_6.68379619144632_1.01551430626023-2 chr7 121981285 121982142 + 1.01551430626023 NA promoter-TSS (NM_001033318) promoter-TSS (NM_001033318) -20 NM_001033318 233824 Mm.442015 NM_001033318 ENSMUSG00000034951 Cog7 5630400E24Rik|Gm167 component of oligomeric golgi complex 7 protein-coding common_peak1_21_90_0.352003102495255_6.68379619144632_1.01551430626023-3 chr6 136478666 136479150 + 1.01551430626023 NA Intergenic B1_Mus2|SINE|Alu -39943 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_21_90_0.352003102495255_6.68379619144632_1.01551430626023 chr16 3699422 3699901 + 1.01551430626023 NA Intergenic Intergenic 18463 NM_001161790 54483 Mm.143718 NM_019453 ENSMUSG00000022534 Mefv FMF|TRIM20|pyrin Mediterranean fever protein-coding unique_peak2_21_90_0.352003102495255_6.68379619144632_1.01551430626023 chr7 45204458 45205314 + 1.01551430626023 NA promoter-TSS (NM_201374) promoter-TSS (NM_201374) 6 NM_201374 384619 Mm.214931 NM_201374 ENSMUSG00000038292 Ccdc155 Gm1434|KASH5 coiled-coil domain containing 155 protein-coding common_peak2_146_1107_0.107268587014779_10.1673764595566_1.015492965943 chr5 149245258 149247879 + 1.015492965943 NA Intergenic (CCA)n|Simple_repeat|Simple_repeat -18436 NM_001308462 11690 Mm.19844 NM_009663 ENSMUSG00000060063 Alox5ap Flap arachidonate 5-lipoxygenase activating protein protein-coding common_peak2_120_863_0.12167934247198_9.81572717339946_1.01531598327325 chr13 67398901 67400335 + 1.01531598327325 NA intron (NM_001080941, intron 1 of 3) intron (NM_001080941, intron 1 of 3) 149 NM_001080941 72807 Mm.303790 NM_001080941 ENSMUSG00000078994 Zfp429 2810487A22Rik|AI929863|Rsl2 zinc finger protein 429 protein-coding common_peak1_35_251_-0.245982250440894_7.85428879827947_1.01522575541092 chr3 36065844 36066622 + 1.01522575541092 NA exon (NM_172678, exon 1 of 18) exon (NM_172678, exon 1 of 18) 233 NM_172678 229211 Mm.260997 NM_172678 ENSMUSG00000027710 Acad9 2600017P15Rik|4732402K02|C630012L17Rik|NPD002 acyl-Coenzyme A dehydrogenase family, member 9 protein-coding common_peak2_225_2140_-0.0819372710267512_11.0231004448721_1.01515923577268 chr14 79586419 79588576 + 1.01515923577268 NA promoter-TSS (NM_026474) promoter-TSS (NM_026474) -194 NM_026474 67955 Mm.18972 NM_026474 ENSMUSG00000022024 Sugt1 2410174K12Rik|SGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) protein-coding common_peak1_37_190_0.249547686547498_7.7022026713095_1.01485702736366 chr10 82890527 82891103 + 1.01485702736366 NA intron (NM_001042514, intron 13 of 13) intron (NM_001042514, intron 13 of 13) 24189 NM_025499 66341 Mm.443284 NM_025499 ENSMUSG00000109864 Eid3 1700027M21Rik|NS4EB EP300 interacting inhibitor of differentiation 3 protein-coding common_peak1_37_190_0.249547686547498_7.7022026713095_1.01485702736366-2 chr9 90125965 90126856 + 1.01485702736366 NA Intergenic Intergenic -11590 NM_024431 21761 Mm.426209 NM_024431 ENSMUSG00000062270 Morf4l1 MORFRG15|MRG15|TEG-189|Tex189|mKIAA4002 mortality factor 4 like 1 protein-coding common_peak2_58_341_0.187673890155928_8.51168945996386_1.01479424661504 chr1 55236658 55238261 + 1.01479424661504 NA exon (NM_175439, exon 1 of 1) exon (NM_175439, exon 1 of 1) 282 NM_175439 212679 Mm.19223 NM_175439 ENSMUSG00000046994 Mars2 C730026E21Rik|MetRS methionine-tRNA synthetase 2 (mitochondrial) protein-coding common_peak2_74_466_0.162870968580005_8.94871422399966_1.01478377285531 chr17 14960450 14962137 + 1.01478377285531 NA promoter-TSS (NM_024250) promoter-TSS (NM_024250) -33 NM_024250 72057 Mm.440085 NM_024250 ENSMUSG00000023883 Phf10 1810055P05Rik|AV024533 PHD finger protein 10 protein-coding common_peak2_82_656_-0.150243691153982_9.28462771474534_1.01403108240028 chr3 90052768 90053825 + 1.01403108240028 NA promoter-TSS (NM_028475) promoter-TSS (NM_028475) 494 NM_027500 99650 Mm.300083 NM_025762 ENSMUSG00000027942 4933434E20Rik 5730552F22Rik|AI462154|NICE-3|NS5ATP4 RIKEN cDNA 4933434E20 gene protein-coding common_peak1_16_63_0.403536260974172_6.20176813048709_1.01379877677007-3 chr14 25462724 25463179 + 1.01379877677007 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 3766 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_16_63_0.403536260974172_6.20176813048709_1.01379877677007-2 chr10 7953575 7953957 + 1.01379877677007 NA intron (NM_138667, intron 1 of 6) intron (NM_138667, intron 1 of 6) 2357 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak2_16_63_0.403536260974172_6.20176813048709_1.01379877677007 chr1 90998482 90999186 + 1.01379877677007 NA exon (NM_001111312, exon 1 of 13) exon (NM_001111312, exon 1 of 13) 107 NM_001111312 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_16_63_0.403536260974172_6.20176813048709_1.01379877677007-5 chr5 73197470 73197885 + 1.01379877677007 NA intron (NM_028194, intron 2 of 62) intron (NM_028194, intron 2 of 62) 58941 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_16_63_0.403536260974172_6.20176813048709_1.01379877677007-4 chr19 38930598 38930915 + 1.01379877677007 NA promoter-TSS (NM_008234) promoter-TSS (NM_008234) -234 NM_008234 15201 Mm.57223 NM_008234 ENSMUSG00000025001 Hells AI323785|E130115I21Rik|LSH|Lysh|PASG|YFK8 helicase, lymphoid specific protein-coding common_peak1_16_63_0.403536260974172_6.20176813048709_1.01379877677007 chr1 37585964 37586375 + 1.01379877677007 NA Intergenic MLT2B2|LTR|ERVL -45153 NM_173870 269181 Mm.25861 NM_173870 ENSMUSG00000026110 Mgat4a 9530018I07Rik|GnT-IVa|glcNAc-T-IVa mannoside acetylglucosaminyltransferase 4, isoenzyme A protein-coding common_peak1_25_114_0.309931193696557_7.00045564779265_1.0131325950261 chr12 69485672 69486293 + 1.0131325950261 NA Intergenic Intergenic -10432 NR_038061 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak1_25_114_0.309931193696557_7.00045564779265_1.0131325950261-2 chr14 74944456 74945108 + 1.0131325950261 NA intron (NM_001252132, intron 1 of 18) intron (NM_001252132, intron 1 of 18) 3095 NM_001252132 380916 Mm.288868 NM_001033439 ENSMUSG00000068015 Lrch1 4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding common_peak1_143_1253_-0.107799337370304_10.2384219641169_1.01282652122902 chr3 88770914 88772598 + 1.01282652122902 NA intron (NM_018804, intron 1 of 3) intron (NM_018804, intron 1 of 3) 843 NM_018804 229521 Mm.379376 NM_018804 ENSMUSG00000068923 Syt11 1500004A13Rik|3632445O20Rik|5430404N14Rik|6530420C11Rik|AI851970 synaptotagmin XI protein-coding common_peak2_408_4023_0.0574251365044152_12.0031271580577_1.01245273210344 chr10 127641640 127644717 + 1.01245273210344 NA 5' UTR (NM_009284, exon 1 of 22) 5' UTR (NM_009284, exon 1 of 22) 192 NM_009284 20852 Mm.121721 NM_009284 ENSMUSG00000002147 Stat6 - signal transducer and activator of transcription 6 protein-coding common_peak1_387_4087_-0.0586164952015018_11.9678712333369_1.01236306699033 chr1 138297143 138300883 + 1.01236306699033 NA Intergenic Intergenic 25275 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_85_556_0.150805964100273_9.19693649939017_1.01236085547651 chr1 135728625 135729671 + 1.01236085547651 NA promoter-TSS (NM_007791) promoter-TSS (NM_007791) -49 NM_007791 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak2_166_1302_0.099125237119825_10.397183987128_1.01233518000587 chr6 115675453 115677280 + 1.01233518000587 NA 5' UTR (NM_029780, exon 1 of 17) 5' UTR (NM_029780, exon 1 of 17) 269 NM_029780 110157 Mm.184163 NM_029780 ENSMUSG00000000441 Raf1 6430402F14Rik|AA990557|BB129353|Craf1|D830050J10Rik|Raf-1|c-Raf|v-Raf v-raf-leukemia viral oncogene 1 protein-coding common_peak2_214_1793_0.0848685822130104_10.8513984660258_1.01203368726832 chr11 95687606 95689800 + 1.01203368726832 NA Intergenic Intergenic 21746 NM_008831 18673 Mm.263862 NM_008831 ENSMUSG00000038845 Phb Bap32 prohibitin protein-coding common_peak2_101_693_0.135491235735552_9.50653747044604_1.0118381501113 chr8 126421667 126423225 + 1.0118381501113 NA promoter-TSS (NM_174987) promoter-TSS (NM_174987) -55 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding common_peak1_49_274_0.209339694910719_8.20795765586738_1.01181541660837 chr7 98308669 98309565 + 1.01181541660837 NA intron (NM_025408, intron 1 of 10) CpG 410 NM_025408 66190 Mm.334041 NM_025408 ENSMUSG00000030760 Acer3 1110057L18Rik|5430429L08Rik|AV015045|Phca alkaline ceramidase 3 protein-coding common_peak1_113_800_0.12545259832782_9.70838473157262_1.01159503097005 chr14 29978290 29979286 + 1.01159503097005 NA intron (NM_027493, intron 1 of 12) CpG 451 NM_027493 56249 Mm.215110 NM_027493 ENSMUSG00000015971 Actr8 5730542K05Rik|ARP8 ARP8 actin-related protein 8 protein-coding common_peak2_94_633_0.140130760135804_9.37840441020731_1.01145102803975 chr3 27316229 27317994 + 1.01145102803975 NA promoter-TSS (NM_009425) promoter-TSS (NM_009425) 34 NM_009425 22035 Mm.1062 NM_009425 ENSMUSG00000039304 Tnfsf10 A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Tnlg6a|Trail tumor necrosis factor (ligand) superfamily, member 10 protein-coding common_peak2_29_205_-0.277844094585515_7.54757847989046_1.01141112249863 chr17 34959049 34960077 + 1.01141112249863 NA promoter-TSS (NM_010478) promoter-TSS (NM_010478) -325 NM_010478 15511 Mm.372314 NM_010478 ENSMUSG00000090877 Hspa1b Hsp70|Hsp70-1|Hsp70.1|hsp68 heat shock protein 1B protein-coding common_peak1_29_205_-0.277844094585515_7.54757847989046_1.01141112249863 chr4 135895381 135895866 + 1.01141112249863 NA intron (NM_009924, intron 1 of 1) intron (NM_009924, intron 1 of 1) 434 NM_009924 12802 Mm.297251 NM_009924 ENSMUSG00000062585 Cnr2 CB-2|CB2|CB2-R cannabinoid receptor 2 (macrophage) protein-coding common_peak1_34_170_0.263593199637636_7.54964911470472_1.01141112249863 chr7 30308902 30309490 + 1.01141112249863 NA TTS (NM_001081114) TTS (NM_001081114) 443 NM_198027 233065 Mm.276277 NM_198027 ENSMUSG00000042831 Alkbh6 AI839550|Abh6|C130099A02 alkB homolog 6 protein-coding common_peak1_29_205_-0.277844094585515_7.54757847989046_1.01141112249863-2 chrX 38456101 38456503 + 1.01141112249863 NA exon (NM_010685, exon 1 of 9) exon (NM_010685, exon 1 of 9) 158 NM_010685 16784 Mm.486 NM_010685 ENSMUSG00000016534 Lamp2 CD107b|LGP-B|Lamp II|Lamp-2|Lamp-2a|Lamp-2b|Lamp-2c|Mac3 lysosomal-associated membrane protein 2 protein-coding common_peak1_284_2558_0.0712398743890486_11.356984369234_1.01131225920872 chr6 50415635 50418863 + 1.01131225920872 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -34412 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_144_1088_0.107980662673983_10.1427785700539_1.01120158252867 chr17 71214156 71217100 + 1.01120158252867 NA intron (NM_022882, intron 2 of 19) intron (NM_022882, intron 2 of 19) 10974 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak2_78_619_-0.154025314160922_9.19911174819378_1.01114998534557 chr14 69502221 69503485 + 1.01114998534557 NA Intergenic CpG 9696 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding common_peak1_40_291_-0.228381293814592_8.07563391197272_1.01109457154814-2 chr9 111149288 111149912 + 1.01109457154814 NA intron (NM_001164838, intron 3 of 14) intron (NM_001164838, intron 3 of 14) 31489 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding common_peak1_40_291_-0.228381293814592_8.07563391197272_1.01109457154814 chr5 120115800 120116544 + 1.01109457154814 NA promoter-TSS (NM_028762) promoter-TSS (NM_028762) -341 NM_028762 74111 Mm.41022 NM_028762 ENSMUSG00000029594 Rbm19 1200009A02Rik|AV302714|NPO RNA binding motif protein 19 protein-coding common_peak1_146_1284_-0.106541891017272_10.2742816985726_1.01098945999917 chr2 117341393 117343035 + 1.01098945999917 NA intron (NM_011246, intron 1 of 16) intron (NM_011246, intron 1 of 16) 663 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak2_240_2071_0.0790432075680947_11.0563298914706_1.01087622718443 chr6 65596195 65601462 + 1.01087622718443 NA intron (NM_001001495, intron 4 of 7) intron (NM_001001495, intron 4 of 7) 8430 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak1_22_153_-0.328325736601391_7.10262367239421_1.01051977106132-2 chr9 124103465 124104002 + 1.01051977106132 NA intron (NM_009915, intron 1 of 2) intron (NM_009915, intron 1 of 2) 1550 NM_009915 12772 Mm.6272 NM_009915 ENSMUSG00000049103 Ccr2 Cc-ckr-2|Ccr2a|Ccr2b|Ckr2|Ckr2a|Ckr2b|Cmkbr2|mJe-r chemokine (C-C motif) receptor 2 protein-coding unique_peak2_22_153_-0.328325736601391_7.10262367239421_1.01051977106132-2 chr18 4333290 4334330 + 1.01051977106132 NA intron (NM_007746, intron 7 of 7) intron (NM_007746, intron 7 of 7) 19143 NM_007746 26410 Mm.3275 NM_007746 ENSMUSG00000024235 Map3k8 Cot|Cot/Tpl2|Est|Estf|Tpl-2|Tpl2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding common_peak2_22_153_-0.328325736601391_7.10262367239421_1.01051977106132-3 chr17 47909238 47910096 + 1.01051977106132 NA intron (NM_001110824, intron 1 of 16) CpG 14965 NM_028767 74123 Mm.240062 NM_028767 ENSMUSG00000023991 Foxp4 1200010K03Rik|2310007G05Rik|mFKHLA forkhead box P4 protein-coding common_peak1_22_153_-0.328325736601391_7.10262367239421_1.01051977106132 chr6 144909760 144910278 + 1.01051977106132 NA Intergenic Intergenic 138793 NM_001024468 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding common_peak2_22_153_-0.328325736601391_7.10262367239421_1.01051977106132-2 chr12 41023992 41024811 + 1.01051977106132 NA intron (NM_053122, intron 1 of 6) CpG 311 NM_053122 93757 Mm.363813 NM_053122 ENSMUSG00000056899 Immp2l AI853880|IMP2 IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) protein-coding common_peak2_22_153_-0.328325736601391_7.10262367239421_1.01051977106132 chr10 18922892 18923922 + 1.01051977106132 NA Intergenic L2|LINE|L2 78336 NM_022032 64058 Mm.28209 NM_022032 ENSMUSG00000019851 Perp 1110017A08Rik|KCP1|KRTCAP1|PIGPC1|THW PERP, TP53 apoptosis effector protein-coding unique_peak2_22_153_-0.328325736601391_7.10262367239421_1.01051977106132 chr1 171564976 171566433 + 1.01051977106132 NA intron (NM_018729, intron 1 of 8) intron (NM_018729, intron 1 of 8) 6511 NM_018729 18106 Mm.2299 NM_018729 ENSMUSG00000004709 Cd244 2B4|C9.1|F730046O15Rik|Ly90|NAIL|NKR2B4|Nmrk|SLAMF4 CD244 natural killer cell receptor 2B4 protein-coding common_peak1_236_2264_-0.0790617276669963_11.1057644711001_1.01049156854032 chr3 142559378 142561164 + 1.01049156854032 NA promoter-TSS (NM_001289493) promoter-TSS (NM_001289493) 219 NM_001289492 55932 Mm.439718 NM_018734 ENSMUSG00000028268 Gbp3 AW228655|GBP-3|GBP-4|Gbp4 guanylate binding protein 3 protein-coding common_peak1_385_3742_0.0594382707326506_11.8996984682663_1.01043198384706 chr7 27590712 27593744 + 1.01043198384706 NA intron (NM_001110208, intron 1 of 13) intron (NM_001110208, intron 1 of 13) 668 NM_001110208 11652 Mm.177194 NM_007434 ENSMUSG00000004056 Akt2 2410016A19Rik|AW554154|PKB|PKBbeta thymoma viral proto-oncogene 2 protein-coding common_peak1_89_721_-0.143064078136183_9.42432298781908_1.01023732178086 chr3 90490262 90491197 + 1.01023732178086 NA intron (NM_133854, intron 1 of 3) intron (NM_133854, intron 1 of 3) 284 NM_133854 20615 Mm.331182 NM_133854 ENSMUSG00000001018 Snapin 25kDa|AA407989|AV026596|Bloc1s7|Snap25bp|Snapap SNAP-associated protein protein-coding common_peak2_56_424_-0.186820311474891_8.63790887528762_1.01017184711428 chr6 3383493 3385575 + 1.01017184711428 NA intron (NM_010156, intron 1 of 1) intron (NM_010156, intron 1 of 1) 15037 NM_010156 209086 Mm.196013 NM_010156 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like protein-coding common_peak2_178_1422_0.0948246388962861_10.5221322659746_1.01002657923499 chr4 40238361 40240591 + 1.01002657923499 NA intron (NM_172689, intron 1 of 17) intron (NM_172689, intron 1 of 17) 349 NM_172689 230073 Mm.86382 NM_172689 ENSMUSG00000040296 Ddx58 6430573D20Rik|C330021E21|RIG-I|RLR-1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 protein-coding common_peak1_178_1422_0.0948246388962861_10.5221322659746_1.01002657923499 chr10 77515044 77516797 + 1.01002657923499 NA promoter-TSS (NM_133998) promoter-TSS (NM_133998) -107 NM_133998 108707 Mm.259547 NM_133998 ENSMUSG00000032977 Fam207a 1810008A18Rik|AI303072 family with sequence similarity 207, member A protein-coding common_peak1_106_737_0.131493413295377_9.59322371270808_1.00978394398333 chr12 51377549 51378289 + 1.00978394398333 NA TTS (NM_001167963) TTS (NM_001167963) 406 NM_029825 76983 Mm.216511 NM_029825 ENSMUSG00000020952 Scfd1 3110021P21Rik|RA410|STXBP1L2 Sec1 family domain containing 1 protein-coding common_peak2_28_132_0.293380879011378_7.20197287500688_1.00972243999761 chr15 85878552 85879255 + 1.00972243999761 NA promoter-TSS (NM_028063) promoter-TSS (NM_028063) -424 NM_028063 72026 Mm.158211 NM_028063 ENSMUSG00000022386 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding common_peak2_28_132_0.293380879011378_7.20197287500688_1.00972243999761-2 chr18 34379777 34380610 + 1.00972243999761 NA Intergenic Intergenic -6778 NM_007874 13476 Mm.280075 NM_007874 ENSMUSG00000005873 Reep5 AI324241|AU022809|AW495741|DP1/TB2|Dp1|R74856|TB2/DP1 receptor accessory protein 5 protein-coding common_peak2_131_965_0.114665191197817_9.97321197443468_1.00967670233545 chr5 124551505 124553820 + 1.00967670233545 NA promoter-TSS (NM_026409) promoter-TSS (NM_026409) -202 NM_001190795 67848 Mm.281601 NM_026409 ENSMUSG00000029389 Ddx55 2810021H22Rik|mKIAA1595 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 protein-coding common_peak1_83_540_0.151214482344395_9.15509202499901_1.00952274513281 chr10 75293906 75295500 + 1.00952274513281 NA intron (NM_153406, intron 13 of 15) intron (NM_153406, intron 13 of 15) -22174 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_217_2049_-0.0830536476768167_10.9598813705544_1.00947145618656 chr16 94525306 94527691 + 1.00947145618656 NA 5' UTR (NM_007834, exon 1 of 8) 5' UTR (NM_007834, exon 1 of 8) 131 NM_007834 13185 Mm.7472 NM_007834 ENSMUSG00000022898 Dscr3 AW538125|Dcra Down syndrome critical region gene 3 protein-coding common_peak2_96_787_-0.136713456092966_9.55369509140989_1.00874672623071 chrX 167011084 167014328 + 1.00874672623071 NA Intergenic Intergenic 57664 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding unique_peak2_17_117_-0.377957687489174_6.69366420561725_1.00860794703809-3 chr9 50533084 50533917 + 1.00860794703809 NA exon (NM_133217, exon 12 of 12) exon (NM_133217, exon 12 of 12) -4859 NM_011220 19286 Mm.35856 NM_011220 ENSMUSG00000032067 Pts PTPS 6-pyruvoyl-tetrahydropterin synthase protein-coding unique_peak2_17_117_-0.377957687489174_6.69366420561725_1.00860794703809 chr10 118804036 118804767 + 1.00860794703809 NA Intergenic Intergenic 64502 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_17_117_-0.377957687489174_6.69366420561725_1.00860794703809 chr4 34687487 34687822 + 1.00860794703809 NA promoter-TSS (NM_011895) promoter-TSS (NM_011895) -216 NM_011895 24060 Mm.281885 NM_011895 ENSMUSG00000028293 Slc35a1 AA408150|AI314851 solute carrier family 35 (CMP-sialic acid transporter), member 1 protein-coding unique_peak2_17_117_-0.377957687489174_6.69366420561725_1.00860794703809-2 chr13 51750904 51751872 + 1.00860794703809 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 42359 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_47_348_-0.206695446931201_8.34373550274405_1.00851902586522 chr6 28480209 28481125 + 1.00851902586522 NA intron (NM_019776, intron 1 of 23) intron (NM_019776, intron 1 of 23) 319 NM_019776 56463 Mm.439987 NM_019776 ENSMUSG00000001424 Snd1 AL033314|Tudor-SN staphylococcal nuclease and tudor domain containing 1 protein-coding common_peak1_47_348_-0.206695446931201_8.34373550274405_1.00851902586522 chr13 95714724 95715646 + 1.00851902586522 NA intron (NM_027711, intron 12 of 35) intron (NM_027711, intron 12 of 35) 18265 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak1_87_702_-0.144358514005871_9.3852016220696_1.00826268983129 chr5 115559465 115560232 + 1.00826268983129 NA exon (NM_007475, exon 2 of 7) exon (NM_007475, exon 2 of 7) 381 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak1_377_3961_-0.0596571775980657_11.9221845760905_1.00824154882103 chr9 113705290 113708599 + 1.00824154882103 NA intron (NM_001164678, intron 1 of 17) intron (NM_001164678, intron 1 of 17) 1315 NM_001164678 18571 Mm.29816 NM_011052 ENSMUSG00000032504 Pdcd6ip AI480591|AW544830|Aip1|Alix|C76364|Eig2|mKIAA1375 programmed cell death 6 interacting protein protein-coding common_peak1_74_583_-0.159674850590351_9.10998713358484_1.00818547475725 chr3 146681632 146683073 + 1.00818547475725 NA Intergenic Intergenic -31035 NM_029144 75015 Mm.250432 NM_029144 ENSMUSG00000048652 4930503B20Rik 1700013A07Rik|1700095G21Rik|4930483N21Rik|Gm1652|Samd13 RIKEN cDNA 4930503B20 gene protein-coding common_peak2_74_583_-0.159674850590351_9.10998713358484_1.00818547475725 chr19 5456389 5458039 + 1.00818547475725 NA exon (NM_198616, exon 1 of 1) exon (NM_198616, exon 1 of 1) 349 NM_198616 240514 Mm.329657 NM_198616 ENSMUSG00000095098 Ccdc85b AI842788|BB115872 coiled-coil domain containing 85B protein-coding common_peak2_31_151_0.274938060867939_7.38539654387755_1.00806666077784 chr17 32363851 32365019 + 1.00806666077784 NA intron (NR_033525, intron 4 of 10) intron (NR_033525, intron 4 of 10) -13858 NM_017476 54194 Mm.281005 NM_017476 ENSMUSG00000002625 Akap8l HAP95|Nakap95 A kinase (PRKA) anchor protein 8-like protein-coding common_peak1_44_238_0.225311829583883_8.01352272277269_1.00781546715753 chr19 12833049 12833684 + 1.00781546715753 NA 3' UTR (NM_134152, exon 9 of 9) 3' UTR (NM_134152, exon 9 of 9) -28411 NM_146702 258697 Mm.223132 NM_146702 ENSMUSG00000046272 Olfr1444 MOR202-4 olfactory receptor 1444 protein-coding common_peak1_303_2774_0.0685413920174849_11.4725427521336_1.00770464002247 chr11 107449026 107453124 + 1.00770464002247 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 19645 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_108_902_-0.126839941951221_9.75516220650525_1.007702390862 chr11 79144973 79146909 + 1.007702390862 NA intron (NM_013571, intron 1 of 17) CpG 413 NM_013571 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb kinase suppressor of ras 1 protein-coding common_peak1_51_289_0.202124465812354_8.28097132292111_1.00746069736646 chr11 4186687 4187356 + 1.00746069736646 NA exon (NM_134023, exon 1 of 9) exon (NM_134023, exon 1 of 9) 188 NM_134023 103724 Mm.28140 NM_134023 ENSMUSG00000034412 Tbc1d10a AI447804|EPI64|Tbc1d10|mFLJ00288 TBC1 domain family, member 10a protein-coding common_peak2_134_993_0.113211112155629_10.0137075976401_1.00725867068685 chr3 97609111 97610672 + 1.00725867068685 NA intron (NM_026539, intron 1 of 22) intron (NM_026539, intron 1 of 22) 299 NM_026539 68058 Mm.31761 NM_026539 ENSMUSG00000028089 Chd1l 4432404A22Rik|Alc1|Snf2p chromodomain helicase DNA binding protein 1-like protein-coding common_peak1_113_951_-0.123706732571412_9.83296439702224_1.00670026607746 chr17 71615624 71616974 + 1.00670026607746 NA promoter-TSS (NM_175639) promoter-TSS (NM_175639) 84 NM_175639 72515 Mm.257762 NM_175639 ENSMUSG00000041057 Wdr43 2610318G08Rik|AU020887|AV024208|Wrd43|mKIAA0007 WD repeat domain 43 protein-coding common_peak1_318_2947_0.0665239185453519_11.5587827683677_1.00644396073658 chr17 35916881 35919152 + 1.00644396073658 NA TTS (NR_035445) TTS (NR_035445) 127 NR_035445 100316810 NR_035445 ENSMUSG00000084751 Mir1894 Mirn1894|mmu-mir-1894 microRNA 1894 ncRNA common_peak2_53_303_0.200892364582366_8.34837369573477_1.00634519631998 chr12 100168264 100169362 + 1.00634519631998 NA Intergenic Intergenic -9160 NM_183155 217827 Mm.224076 NM_183155 ENSMUSG00000021179 Nrde2 6720454P05Rik nrde-2 necessary for RNA interference, domain containing protein-coding common_peak1_187_1718_-0.0909981196793304_10.7018547696384_1.00602581174414 chr11 69695006 69696584 + 1.00602581174414 NA 5' UTR (NM_001159503, exon 1 of 13) 5' UTR (NM_001159503, exon 1 of 13) 303 NM_011614 21944 Mm.8983 NM_011614 ENSMUSG00000097328 Tnfsf12 Apo3l|Dr3l|Dr3lg|Tweak tumor necrosis factor (ligand) superfamily, member 12 protein-coding common_peak2_248_2158_0.0774928572991271_11.1148939566721_1.00601235590174 chr18 53743351 53746015 + 1.00601235590174 NA promoter-TSS (NM_178686) promoter-TSS (NM_178686) -136 NM_178686 225523 Mm.193678 NM_178686 ENSMUSG00000048799 Cep120 A230075C01|AU016693|Ccdc100 centrosomal protein 120 protein-coding common_peak2_104_720_0.131724781435997_9.55971783995882_1.0059325855517 chr16 31663122 31664691 + 1.0059325855517 NA promoter-TSS (NM_001252433) promoter-TSS (NM_001252433) -29 NM_001252433 13383 Mm.382 NM_007862 ENSMUSG00000022770 Dlg1 B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187 discs, large homolog 1 (Drosophila) protein-coding common_peak1_37_267_-0.239112675874526_7.94653285252051_1.00511145256959 chr2 30358634 30359325 + 1.00511145256959 NA intron (NM_139302, intron 1 of 10) intron (NM_139302, intron 1 of 10) 337 NM_139302 227700 Mm.33343 NM_139302 ENSMUSG00000026860 Sh3glb2 SPAS-1 SH3-domain GRB2-like endophilin B2 protein-coding common_peak2_42_307_-0.221059370440951_8.15625685547443_1.00485767654947 chr10 99171257 99172900 + 1.00485767654947 NA intron (NM_027740, intron 10 of 11) intron (NM_027740, intron 10 of 11) 63943 NM_015737 14426 Mm.314 NM_015737 ENSMUSG00000090035 Galnt4 AV011803 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 protein-coding common_peak1_124_900_0.118737483201166_9.87475203741412_1.00470619757416 chr10 71237111 71238638 + 1.00470619757416 NA exon (NM_009360, exon 1 of 7) exon (NM_009360, exon 1 of 7) 170 NM_009360 21780 Mm.229292 NM_009360 ENSMUSG00000003923 Tfam AI661103|Hmgts|mtTFA|tsHMG transcription factor A, mitochondrial protein-coding common_peak1_228_2173_-0.0806683302691358_11.0458020598927_1.00401129147416 chr1 180389696 180392256 + 1.00401129147416 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -60427 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_77_491_0.157041255454978_9.02103513306673_1.00378235095066-2 chr8 74993468 74994285 + 1.00378235095066 NA intron (NM_178017, intron 1 of 10) CpG 226 NM_178017 70823 Mm.261739 NM_178017 ENSMUSG00000034518 Hmgxb4 4733401K04Rik|AI316803|Hmgb2l1 HMG box domain containing 4 protein-coding common_peak1_77_491_0.157041255454978_9.02103513306673_1.00378235095066 chr16 97921894 97923048 + 1.00378235095066 NA 5' UTR (NM_174847, exon 1 of 14) 5' UTR (NM_174847, exon 1 of 14) 162 NM_174847 207781 Mm.1465 NM_174847 ENSMUSG00000045975 C2cd2 5730563M15|5830404H04Rik|AI314146|AI449533|BF168443|ORF25|mKIAA4045 C2 calcium-dependent domain containing 2 protein-coding common_peak1_88_582_0.145666295563691_9.26018522098234_1.00374921531767 chr1 138972491 138973754 + 1.00374921531767 NA intron (NM_181347, intron 1 of 20) intron (NM_181347, intron 1 of 20) -4535 NR_108103 78229 Mm.437838 NR_108103 ENSMUSG00000104900 4930596I21Rik - RIKEN cDNA 4930596I21 gene ncRNA common_peak2_75_474_0.161805122551293_8.97268626449396_1.00340822045116-3 chr8 23207460 23209260 + 1.00340822045116 NA promoter-TSS (NM_018743) promoter-TSS (NM_018743) 93 NM_018743 102247 Mm.200898 NM_018743 ENSMUSG00000031545 Gpat4 AU041707|AW545732|Agpat6|Tsarg7 glycerol-3-phosphate acyltransferase 4 protein-coding common_peak1_75_474_0.161805122551293_8.97268626449396_1.00340822045116 chr16 95701913 95703002 + 1.00340822045116 NA promoter-TSS (NM_011809) promoter-TSS (NM_011809) 50 NM_011809 23872 Mm.290207 NM_011809 ENSMUSG00000022895 Ets2 AU022856|Ets-2 E26 avian leukemia oncogene 2, 3' domain protein-coding common_peak2_75_474_0.161805122551293_8.97268626449396_1.00340822045116-2 chr4 59782761 59783947 + 1.00340822045116 NA intron (NM_001013577, intron 1 of 4) PB1D10|SINE|Alu 501 NM_001013577 66209 Mm.51988 NM_001013577 ENSMUSG00000038544 Inip 1110054O05Rik|2610312O17Rik|AA399876|Ssbip1 INTS3 and NABP interacting protein protein-coding common_peak2_75_474_0.161805122551293_8.97268626449396_1.00340822045116 chr1 11098526 11101063 + 1.00340822045116 NA intron (NM_029525, intron 7 of 39) intron (NM_029525, intron 7 of 39) 106329 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding common_peak1_15_58_0.413610213763326_6.0894481562435_1.00278553979691-2 chr5 134214192 134214601 + 1.00278553979691 NA intron (NM_053266, intron 14 of 15) RSINE1|SINE|B4 15229 NM_001286037 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak1_15_58_0.413610213763326_6.0894481562435_1.00278553979691 chr5 124213959 124214382 + 1.00278553979691 NA intron (NM_011256, intron 2 of 24) intron (NM_011256, intron 2 of 24) -15555 NR_045369 75927 Mm.410803 NR_045369 ENSMUSG00000090220 Pitpnm2os1 4930568K20Rik phosphatidylinositol transfer protein, membrane-associated 2, opposite strand 1 ncRNA common_peak1_21_145_-0.330026816186066_7.02481115078698_1.00217352306558 chr5 30949665 30950281 + 1.00217352306558 NA promoter-TSS (NM_021304) promoter-TSS (NM_021304) -93 NR_003522 57742 Mm.389615 NM_021304 ENSMUSG00000006638 Abhd1 LABH-1|LABH1 abhydrolase domain containing 1 protein-coding common_peak2_21_145_-0.330026816186066_7.02481115078698_1.00217352306558 chr11 98954811 98955689 + 1.00217352306558 NA intron (NM_001177302, intron 3 of 9) intron (NM_001177302, intron 3 of 9) -5221 NM_001176528 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_21_145_-0.330026816186066_7.02481115078698_1.00217352306558-2 chr6 129654546 129655092 + 1.00217352306558 NA Intergenic Lx3_Mus|LINE|L1 5737 NM_010653 16642 Mm.347927 NM_010653 ENSMUSG00000052736 Klrc2 NKG2C killer cell lectin-like receptor subfamily C, member 2 protein-coding common_peak2_95_642_0.13832516313686_9.39783750889638_1.0019711383405 chr14 19823062 19824748 + 1.0019711383405 NA promoter-TSS (NM_026528) promoter-TSS (NM_026528) -82 NM_026528 68045 Mm.21932 NM_026528 ENSMUSG00000021807 2700060E02Rik - RIKEN cDNA 2700060E02 gene protein-coding common_peak2_151_1156_0.104027987848468_10.2281871430317_1.00184884442878 chr19 41847094 41848966 + 1.00184884442878 NA 5' UTR (NM_177603, exon 1 of 1) 5' UTR (NM_177603, exon 1 of 1) 102 NM_177603 212398 Mm.222723 NM_177603 ENSMUSG00000047604 Frat2 - frequently rearranged in advanced T cell lymphomas 2 protein-coding common_peak1_34_243_-0.249291623039353_7.80609152604321_1.0017837827786 chr10 96355310 96355925 + 1.0017837827786 NA Intergenic RMER6C|LTR|ERVK 129410 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_86_565_0.14813958783397_9.21872803674887_1.00160950414443 chr10 41450372 41451208 + 1.00160950414443 NA intron (NR_102360, intron 1 of 6) intron (NR_102360, intron 1 of 6) 432 NR_102360 268294 Mm.258475 NM_153398 ENSMUSG00000019826 Zbtb24 BC055367|Bif1|Bsg1|ZNF450 zinc finger and BTB domain containing 24 protein-coding common_peak2_86_565_0.14813958783397_9.21872803674887_1.00160950414443 chr11 3963230 3964643 + 1.00160950414443 NA promoter-TSS (NM_022889) promoter-TSS (NM_022889) -39 NM_022889 64934 Mm.28659 NM_022889 ENSMUSG00000020430 Pes1 - pescadillo ribosomal biogenesis factor 1 protein-coding common_peak2_71_442_0.166747095690361_8.8745364364002_1.00097303902869 chr18 61725627 61727051 + 1.00097303902869 NA promoter-TSS (NM_021296) promoter-TSS (NM_021296) -8 NM_021296 17714 Mm.269657 NM_021296 ENSMUSG00000024580 Grpel2 mt-GrpE#2|mt-Grpel2 GrpE-like 2, mitochondrial protein-coding common_peak1_242_2332_-0.0774939928380345_11.1492235955652_1.00092626465036 chr6 143166547 143168762 + 1.00092626465036 NA intron (NM_029250, intron 1 of 7) CpG 424 NM_029250 75320 Mm.272548 NM_029250 ENSMUSG00000030275 Etnk1 1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1 ethanolamine kinase 1 protein-coding common_peak1_46_253_0.214446400653852_8.09590788709909_1.0007081411313 chr9 57831055 57832128 + 1.0007081411313 NA intron (NM_019689, intron 1 of 7) intron (NM_019689, intron 1 of 7) 2643 NM_019689 56380 Mm.425588 NM_019689 ENSMUSG00000004661 Arid3b Bdp|Dri2 AT rich interactive domain 3B (BRIGHT-like) protein-coding common_peak1_112_791_0.12616287809279_9.692438059126_1.00045789305331 chr7 80534345 80535257 + 1.00045789305331 NA 5' UTR (NM_007550, exon 1 of 22) 5' UTR (NM_007550, exon 1 of 22) 197 NM_007550 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding common_peak2_97_796_-0.134947365893431_9.57096223104376_1.00037093830459 chr11 85352099 85353891 + 1.00037093830459 NA promoter-TSS (NM_138681) promoter-TSS (NM_138681) -169 NM_001166642 192197 Mm.209989 NM_138681 ENSMUSG00000059439 Bcas3 1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira breast carcinoma amplified sequence 3 protein-coding unique_peak2_24_108_0.317830867359458_6.92709975845665_1.00028844196551 chr2 117448422 117449252 + 1.00028844196551 NA Intergenic Intergenic -105960 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_24_108_0.317830867359458_6.92709975845665_1.00028844196551 chr18 77140497 77141065 + 1.00028844196551 NA intron (NM_001164167, intron 11 of 13) intron (NM_001164167, intron 11 of 13) -45066 NM_153124 225742 Mm.365178 NM_013666 ENSMUSG00000025425 St8sia5 ST8SiaV|Siat8e ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 protein-coding unique_peak2_24_108_0.317830867359458_6.92709975845665_1.00028844196551-2 chr7 81154268 81155167 + 1.00028844196551 NA intron (NM_001004184, intron 11 of 17) ID_B1|SINE|B4 39918 NM_001004184 434203 Mm.389909 NM_001004184 ENSMUSG00000025726 Slc28a1 Cnt1 solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 protein-coding common_peak2_24_108_0.317830867359458_6.92709975845665_1.00028844196551 chr10 7948824 7949755 + 1.00028844196551 NA intron (NM_138667, intron 1 of 6) intron (NM_138667, intron 1 of 6) 6834 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak2_186_1503_0.0923288224243866_10.6007532628898_1.00027265857765 chr14 20081399 20083976 + 1.00027265857765 NA intron (NM_026209, intron 1 of 1) intron (NM_026209, intron 1 of 1) 485 NM_026209 67509 Mm.292423 NM_026209 ENSMUSG00000045107 Saysd1 1810063B07Rik|4930488P03Rik SAYSVFN motif domain containing 1 protein-coding common_peak2_44_323_-0.213671365319993_8.23301432022463_0.999987074450258 chr16 35022156 35023322 + 0.999987074450258 NA intron (NM_023587, intron 1 of 6) CpG 318 NM_023587 70757 Mm.27286 NM_023587 ENSMUSG00000035376 Hacd2 6330408J20Rik|AI255777|AI481689|Hcad2|Ptplb 3-hydroxyacyl-CoA dehydratase 2 protein-coding common_peak2_217_1825_0.0838834967317705_10.8764127983501_0.999928012318266 chrX 151800664 151804762 + 0.999928012318266 NA promoter-TSS (NM_021523) promoter-TSS (NM_021523) -569 NM_021523 59026 Mm.27372 NM_021523 ENSMUSG00000025261 Huwe1 5430439H10Rik|AU041296|Arf-bp1|C430014N20Rik|C80292|Gm1718|Ib772|LASU1|Mule|Ureb1 HECT, UBA and WWE domain containing 1 protein-coding common_peak2_114_960_-0.12182622980192_9.84747950587279_0.999804172606934 chr6 122272862 122276073 + 0.999804172606934 NA intron (NM_016970, intron 3 of 4) MLT1A|LTR|ERVL-MaLR 8366 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak1_266_2610_-0.0732338573953708_11.3137698136152_0.999795741018241 chr9 110531857 110533745 + 0.999795741018241 NA intron (NM_001081340, intron 1 of 20) CpG 204 NM_001081340 235626 Mm.288949 NM_001081340 ENSMUSG00000044791 Setd2 4921524K10Rik|BC031601|KMT3A SET domain containing 2 protein-coding common_peak1_100_685_0.134783427432644_9.48945647988914_0.999544176517521 chr1 60180549 60181385 + 0.999544176517521 NA intron (NM_173444, intron 1 of 54) intron (NM_173444, intron 1 of 54) 368 NM_173444 269198 Mm.205224 NM_173444 ENSMUSG00000073664 Nbeal1 2310076G13Rik|A530050O19Rik|A530083I02Rik|AI662228|ALS2CR17 neurobeachin like 1 protein-coding common_peak2_100_685_0.134783427432644_9.48945647988914_0.999544176517521 chr16 50731756 50733347 + 0.999544176517521 NA non-coding (NR_028300, exon 1 of 2) non-coding (NR_028300, exon 1 of 2) 222 NR_028300 68190 Mm.139089 NR_028300 Dubr 5330426P16Rik|Dum Dppa2 upstream binding RNA ncRNA common_peak2_59_349_0.184057631951731_8.54323992780819_0.999483894636335-2 chr6 52697739 52699312 + 0.999483894636335 NA Intergenic Intergenic -15204 NM_025816 52440 Mm.389757 NM_025816 ENSMUSG00000004535 Tax1bp1 1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151 Tax1 (human T cell leukemia virus type I) binding protein 1 protein-coding common_peak2_59_349_0.184057631951731_8.54323992780819_0.999483894636335 chr17 6766847 6768832 + 0.999483894636335 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 14941 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak1_53_398_-0.191425058196394_8.54453240712415_0.999483894636335 chr5 110094437 110095266 + 0.999483894636335 NA Intergenic Intergenic -5118 NM_207279 403178 Mm.297057 NM_207279 ENSMUSG00000064247 Plcxd1 A330045H12Rik|Gm576 phosphatidylinositol-specific phospholipase C, X domain containing 1 protein-coding common_peak1_28_197_-0.280693305567041_7.48900996729609_0.999354230152901 chr13 24511073 24511700 + 0.999354230152901 NA Intergenic Intergenic -70803 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_28_197_-0.280693305567041_7.48900996729609_0.999354230152901-3 chr7 39588512 39589054 + 0.999354230152901 NA Intergenic CpG 71017 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak1_28_197_-0.280693305567041_7.48900996729609_0.999354230152901-2 chr14 63122540 63123087 + 0.999354230152901 NA intron (NM_007798, intron 1 of 9) CpG 351 NM_007798 13030 Mm.236553 NM_007798 ENSMUSG00000021939 Ctsb CB cathepsin B protein-coding common_peak1_28_197_-0.280693305567041_7.48900996729609_0.999354230152901-4 chr9 40344121 40344694 + 0.999354230152901 NA intron (NM_172768, intron 2 of 19) intron (NM_172768, intron 2 of 19) 10935 NR_040728 73558 Mm.398307 NR_040728 1700110K17Rik - RIKEN cDNA 1700110K17 gene ncRNA common_peak1_20_85_0.3512098890964_6.6018696992503_0.998933987568915-2 chr3 69171000 69171451 + 0.998933987568915 NA Intergenic Intergenic 39992 NR_126533 381452 Mm.331067 NM_001243000 ENSMUSG00000094763 Gm1647 - predicted gene 1647 ncRNA unique_peak2_20_85_0.3512098890964_6.6018696992503_0.998933987568915 chr6 146579941 146580790 + 0.998933987568915 NA intron (NM_026218, intron 1 of 6) intron (NM_026218, intron 1 of 6) 2454 NM_026218 67529 Mm.333499 NM_026218 ENSMUSG00000040242 Fgfr1op2 1500031J01Rik FGFR1 oncogene partner 2 protein-coding common_peak1_20_85_0.3512098890964_6.6018696992503_0.998933987568915-3 chr5 3670065 3670612 + 0.998933987568915 NA intron (NM_029141, intron 8 of 10) intron (NM_029141, intron 8 of 10) 13334 NM_029154 75010 Mm.85064 NM_029141 ENSMUSG00000014529 Tmbim7 4930403J02Rik|4930500J03Rik|4930511M11Rik|Lfg5|Lgf5|Tmbim1b transmembrane BAX inhibitor motif containing 7 protein-coding common_peak1_20_85_0.3512098890964_6.6018696992503_0.998933987568915 chr11 87733040 87733573 + 0.998933987568915 NA intron (NM_172448, intron 9 of 9) intron (NM_172448, intron 9 of 9) -4259 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding unique_peak2_16_110_-0.390879605375934_6.59897606366214_0.99893398756889-2 chr3 148728875 148729840 + 0.99893398756889 NA Intergenic Intergenic 225278 NM_001081298 99633 Mm.9776 NM_001081298 ENSMUSG00000028184 Adgrl2 AI450192|CIRL-2|Gm619|Lec1|Lphh1|Lphn2|mKIAA0786 adhesion G protein-coupled receptor L2 protein-coding common_peak1_16_110_-0.390879605375934_6.59897606366214_0.99893398756889-2 chr1 170273564 170273977 + 0.99893398756889 NA Intergenic Intergenic -3554 NM_012009 26904 Mm.57009 NM_012009 ENSMUSG00000102418 Sh2d1b1 EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b SH2 domain containing 1B1 protein-coding common_peak1_16_110_-0.390879605375934_6.59897606366214_0.99893398756889-3 chr7 19577869 19578251 + 0.99893398756889 NA intron (NM_022409, intron 2 of 2) intron (NM_022409, intron 2 of 2) 773 NM_022409 63872 Mm.23310 NM_022409 ENSMUSG00000011267 Zfp296 2210018A16Rik|Znf296 zinc finger protein 296 protein-coding common_peak1_16_110_-0.390879605375934_6.59897606366214_0.99893398756889 chr1 45734525 45735048 + 0.99893398756889 NA Intergenic IAPEz-int|LTR|ERVK -60715 NM_028599 73674 Mm.270376 NM_028599 ENSMUSG00000025995 Wdr75 1300003A18Rik|2410118I19Rik|C77608 WD repeat domain 75 protein-coding unique_peak2_16_110_-0.390879605375934_6.59897606366214_0.99893398756889 chr17 36083556 36084273 + 0.99893398756889 NA exon (NM_008199, exon 2 of 6) exon (NM_008199, exon 2 of 6) 335 NM_008199 14963 Mm.477808 NM_008199 ENSMUSG00000073406 H2-Bl H2-B1|H2-Bl-like histocompatibility 2, blastocyst protein-coding common_peak2_88_711_-0.14271506220221_9.40437589986529_0.998867170537853 chr18 70643297 70645178 + 0.998867170537853 NA Intergenic Intergenic 75945 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak1_250_2181_0.076362094490392_11.1296164335688_0.998775189213285 chr2 11776757 11779130 + 0.998775189213285 NA promoter-TSS (NM_015792) promoter-TSS (NM_015792) 190 NM_177268 320816 Mm.260201 NM_177268 ENSMUSG00000047909 Ankrd16 2810455F06Rik|AI646698|D430029B21Rik ankyrin repeat domain 16 protein-coding common_peak2_67_411_0.170260356163665_8.77163070526505_0.998561575652599 chr8 70420083 70422191 + 0.998561575652599 NA intron (NM_001004062, intron 1 of 13) intron (NM_001004062, intron 1 of 13) 18436 NM_001004062 382056 Mm.227767 NM_001004062 ENSMUSG00000003575 Crtc1 AI413414|Mect1|R74955|TORC1|mKIAA0616 CREB regulated transcription coactivator 1 protein-coding common_peak1_31_220_-0.265036985079908_7.65538406685148_0.998545953867927 chr5 52741488 52742127 + 0.998545953867927 NA exon (NM_028744, exon 1 of 10) exon (NM_028744, exon 1 of 10) 233 NM_025951 67073 Mm.248647 NM_025951 ENSMUSG00000029186 Pi4k2b 2610042N09Rik|4933409G22Rik phosphatidylinositol 4-kinase type 2 beta protein-coding unique_peak2_31_220_-0.265036985079908_7.65538406685148_0.998545953867927 chr1 64970129 64971505 + 0.998545953867927 NA Intergenic Intergenic -13993 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_31_220_-0.265036985079908_7.65538406685148_0.998545953867927 chr5 123344047 123345162 + 0.998545953867927 NA 5' UTR (NM_029850, exon 1 of 6) 5' UTR (NM_029850, exon 1 of 6) 156 NM_029850 77045 Mm.151960 NM_029850 ENSMUSG00000029438 Bcl7a 4432415N06Rik|AI448316 B cell CLL/lymphoma 7A protein-coding common_peak2_211_1762_0.0851496284956426_10.826391573568_0.998491120719615 chr5 137599923 137602142 + 0.998491120719615 NA promoter-TSS (NM_030037) promoter-TSS (NM_030037) 27 NM_030037 68929 Mm.41355 NM_030037 ENSMUSG00000037221 Mospd3 1190005J19Rik|5133401H10Rik|Gtig2|R124 motile sperm domain containing 3 protein-coding common_peak1_75_591_-0.155864539859346_9.13152109569928_0.998091561332916 chr6 127560920 127561896 + 0.998091561332916 NA Intergenic CpG -16567 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak2_302_3036_-0.0674484834087181_11.5347069514631_0.997983971574684 chr18 46523272 46527004 + 0.997983971574684 NA intron (NM_173423, intron 1 of 2) intron (NM_173423, intron 1 of 2) 833 NM_173423 240263 Mm.38249 NM_173423 ENSMUSG00000033319 Fem1c 2610312A07Rik|3632443A22Rik|AI646567 fem-1 homolog c (C.elegans) protein-coding common_peak2_149_1136_0.105745480583776_10.2038892791841_0.997918615253137 chr8 120822424 120826363 + 0.997918615253137 NA Intergenic Intergenic 85754 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_292_2649_0.0698170188549252_11.4066851537654_0.997889344237061 chr6 128732160 128734834 + 0.997889344237061 NA Intergenic Intergenic -10451 NM_001099918 100043861 Mm.66911 NM_001099918 ENSMUSG00000079299 Klrb1 4930431A04Rik|Gm4696|Klrb1g|Klrb6|Ly-55|Ly55|NKR-P1G|Nkrp-1e|Nkrp1g killer cell lectin-like receptor subfamily B member 1 protein-coding common_peak2_102_844_-0.131259647392808_9.65717770747314_0.997851795173812 chr19 29647201 29648605 + 0.997851795173812 NA intron (NM_001081213, intron 1 of 14) CpG 517 NM_001081213 226090 Mm.267131 NM_146098 ENSMUSG00000046324 Ermp1 D19Ertd410e|D19Wsu12e|Fxna|mKIAA1815 endoplasmic reticulum metallopeptidase 1 protein-coding common_peak1_48_267_0.210787046452912_8.17148271368423_0.997525175890145 chr7 35646845 35647692 + 0.997525175890145 NA intron (NM_019746, intron 1 of 5) CpG 214 NM_019746 56330 Mm.371609 NM_019746 ENSMUSG00000030417 Pdcd5 2200003D22Rik|AA408513|Tfar19 programmed cell death 5 protein-coding common_peak2_125_910_0.116914227336087_9.8897643574701_0.997287073433667 chr3 88591871 88593846 + 0.997287073433667 NA Intergenic Intergenic 13187 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak1_317_3217_-0.0654600179406941_11.6192186017531_0.996981796477002 chr16 56028618 56030566 + 0.996981796477002 NA intron (NM_001024622, intron 1 of 4) CpG 125 NM_001024622 76302 Mm.310642 NM_001024622 ENSMUSG00000071533 Pcnp 1110018D06Rik|AI647035 PEST proteolytic signal containing nuclear protein protein-coding common_peak2_141_1060_0.108562916118608_10.1054903989741_0.99638484238611 chr5 121451605 121453346 + 0.99638484238611 NA promoter-TSS (NM_029912) promoter-TSS (NM_029912) -1 NM_026129 67397 Mm.154570 NM_026129 ENSMUSG00000029616 Erp29 1200015M03Rik|2810446M09Rik|AW209030|Erp28|Erp31|PDI-Db endoplasmic reticulum protein 29 protein-coding common_peak1_172_1362_0.0966406846873387_10.4608901891489_0.996356338810826 chr15 78898274 78900396 + 0.996356338810826 NA promoter-TSS (NM_001316684) promoter-TSS (NM_001316684) -433 NR_133564 20401 Mm.4462 NM_009164 ENSMUSG00000022436 Sh3bp1 3BP-1 SH3-domain binding protein 1 protein-coding common_peak2_57_432_-0.182947589027799_8.66674942021282_0.996197258956363 chr5 136116187 136117387 + 0.996197258956363 NA promoter-TSS (NM_011293) promoter-TSS (NM_011293) 96 NM_011293 20022 Mm.4896 NM_011293 ENSMUSG00000039771 Polr2j 14.5kDa|Polr2i|Rpb11a|Rpo2-4 polymerase (RNA) II (DNA directed) polypeptide J protein-coding common_peak2_91_608_0.141387008559891_9.32099192218628_0.996190986281364 chr12 85454463 85456400 + 0.996190986281364 NA Intergenic CpG -18470 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak2_160_1428_-0.0987932877368376_10.4313935572274_0.995846646453738 chr10 81175048 81178608 + 0.995846646453738 NA intron (NM_007907, intron 1 of 13) CpG 197 NM_007907 13629 Mm.2903 NM_007907 ENSMUSG00000034994 Eef2 Ef-2 eukaryotic translation elongation factor 2 protein-coding common_peak2_33_164_0.263826357914711_7.49823539320317_0.995484644624787 chr17 79584171 79585230 + 0.995484644624787 NA Intergenic Intergenic -30200 NM_201361 381110 Mm.209801 NM_201361 ENSMUSG00000036368 Rmdn2 AW061290|Fam82a1|RMD-2|mRMD-2 regulator of microtubule dynamics 2 protein-coding unique_peak2_27_126_0.29788006324576_7.13762471839505_0.995366254955826 chr16 42909750 42910725 + 0.995366254955826 NA intron (NM_001285805, intron 1 of 10) intron (NM_001285805, intron 1 of 10) 1833 NR_040402 100503040 Mm.490721 NR_040402 Gm19522 - predicted gene, 19522 ncRNA common_peak1_27_126_0.29788006324576_7.13762471839505_0.995366254955826 chr14 66846681 66847258 + 0.995366254955826 NA intron (NM_009955, intron 3 of 13) GA-rich|Low_complexity|Low_complexity 21631 NM_009955 12934 Mm.352648 NM_009955 ENSMUSG00000022048 Dpysl2 AI851130|Crmp2|DRP2|Musunc33|TOAD-64|Ulip2 dihydropyrimidinase-like 2 protein-coding common_peak2_93_758_-0.138212676803091_9.49884973701392_0.994716619998422 chr2 90486811 90489097 + 0.994716619998422 NA intron (NM_008982, intron 1 of 23) B4A|SINE|B4 -8780 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak1_248_2159_0.0768247882708_11.1152279911862_0.994153915739119 chr18 53743347 53746025 + 0.994153915739119 NA promoter-TSS (NM_178686) promoter-TSS (NM_178686) -139 NM_178686 225523 Mm.193678 NM_178686 ENSMUSG00000048799 Cep120 A230075C01|AU016693|Ccdc100 centrosomal protein 120 protein-coding common_peak2_46_340_-0.210496841598156_8.30837950822509_0.99408818981256 chr7 34629382 34631226 + 0.99408818981256 NA Intergenic Intergenic 22537 NM_146188 233107 Mm.486198 NM_146188 ENSMUSG00000030499 Kctd15 BC031749 potassium channel tetramerisation domain containing 15 protein-coding common_peak2_84_674_-0.147101844085702_9.32519276989534_0.994023576629519 chr9 118271921 118274238 + 0.994023576629519 NA Intergenic L3|LINE|CR1 -122883 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding common_peak1_59_450_-0.18171487947132_8.72612618351972_0.993877489258982 chr7 127375436 127376290 + 0.993877489258982 NA 5' UTR (NM_175560, exon 1 of 3) 5' UTR (NM_175560, exon 1 of 3) 187 NM_175560 269997 Mm.221270 NM_175560 ENSMUSG00000054381 Zfp747 6430604K15Rik zinc finger protein 747 protein-coding common_peak2_125_1069_-0.115173610150372_10.0058082762133_0.993821181185678 chr1 182408245 182410034 + 0.993821181185678 NA promoter-TSS (NM_173378) promoter-TSS (NM_173378) -28 NM_173378 209456 Mm.287450 NM_173378 ENSMUSG00000026510 Trp53bp2 53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550 transformation related protein 53 binding protein 2 protein-coding common_peak1_14_53_0.42715661924788_5.96846581178741_0.99331064214776-3 chr8 34158517 34158906 + 0.99331064214776 NA intron (NM_026432, intron 1 of 5) B2_Mm1a|SINE|B2 4148 NM_026432 67887 Mm.290353 NM_026432 ENSMUSG00000031532 Saraf 1810045K07Rik|Tmem66 store-operated calcium entry-associated regulatory factor protein-coding common_peak1_14_53_0.42715661924788_5.96846581178741_0.99331064214776-2 chr6 41605512 41605987 + 0.99331064214776 NA 5' UTR (NM_007680, exon 1 of 18) 5' UTR (NM_007680, exon 1 of 18) 267 NM_007680 13848 Mm.271976 NM_007680 ENSMUSG00000029869 Ephb6 Cekl|Mep Eph receptor B6 protein-coding common_peak1_14_53_0.42715661924788_5.96846581178741_0.99331064214776 chr1 91193522 91193859 + 0.99331064214776 NA intron (NM_178401, intron 1 of 2) intron (NM_178401, intron 1 of 2) 13868 NM_001168392 51801 Mm.3272 NM_016894 ENSMUSG00000034353 Ramp1 9130218E19Rik receptor (calcitonin) activity modifying protein 1 protein-coding common_peak1_175_1587_-0.093360520889938_10.586314936698_0.993266719955839 chr11 100319876 100320908 + 0.993266719955839 NA intron (NM_011508, intron 1 of 3) CpG 396 NM_011508 20918 Mm.13886 NM_011508 ENSMUSG00000035530 Eif1 Sui1-rs1 eukaryotic translation initiation factor 1 protein-coding common_peak2_141_1231_-0.107014683661529_10.2132791988641_0.993221677781044 chr18 3382444 3384194 + 0.993221677781044 NA promoter-TSS (NM_029402) promoter-TSS (NM_029402) 94 NM_029402 71745 Mm.291707 NM_029402 ENSMUSG00000024231 Cul2 1300003D18Rik|4932411N15Rik|AI327301|mKIAA4106 cullin 2 protein-coding common_peak2_251_2435_-0.0754646355818398_11.2125661001154_0.993169939882339 chr5 112323847 112327638 + 0.993169939882339 NA promoter-TSS (NM_018783) promoter-TSS (NM_018783) -627 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding common_peak1_108_756_0.127592745543904_9.62794586275768_0.992758703504276 chr7 43423203 43425104 + 0.992758703504276 NA Intergenic Intergenic -5948 NM_177693 233187 Mm.267027 NM_177693 ENSMUSG00000004613 Lim2 19kDa|4833403J20|MP19|To3 lens intrinsic membrane protein 2 protein-coding unique_peak2_30_145_0.276857645854289_7.32825338180716_0.992726383519411 chr11 98366586 98367885 + 0.992726383519411 NA intron (NM_021547, intron 1 of 14) intron (NM_021547, intron 1 of 14) 8867 NM_021547 59045 Mm.265546 NM_021547 ENSMUSG00000018167 Stard3 Mln64|es64 START domain containing 3 protein-coding common_peak1_164_1283_0.0989960474168985_10.3759275108308_0.992640757551397 chr5 34195627 34196660 + 0.992640757551397 NA intron (NM_001015039, intron 12 of 12) intron (NM_001015039, intron 12 of 12) -8433 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding common_peak1_110_921_-0.124704773064643_9.78627055389702_0.992495897778204 chr16 96371691 96373718 + 0.992495897778204 NA intron (NM_028078, intron 2 of 7) intron (NM_028078, intron 2 of 7) 10940 NM_028078 72058 Mm.119714 NM_028078 ENSMUSG00000000159 Igsf5 2010003D20Rik|JCAM|Jam4 immunoglobulin superfamily, member 5 protein-coding common_peak1_203_1679_0.0866498818340453_10.7575704585831_0.992458031576987 chr10 96870586 96872817 + 0.992458031576987 NA Intergenic Intergenic -164067 NR_045358 75301 Mm.108650 NR_045358 4930556N09Rik - RIKEN cDNA 4930556N09 gene ncRNA common_peak1_52_296_0.201422644642346_8.31503044312194_0.991908545889416 chr17 6316468 6317619 + 0.991908545889416 NA intron (NM_001166629, intron 1 of 4) CpG 431 NM_001166629 100310872 Mm.381893 NM_001166629 ENSMUSG00000092074 Dynlt1a - dynein light chain Tctex-type 1A protein-coding common_peak2_52_296_0.201422644642346_8.31503044312194_0.991908545889416 chr15 73644979 73646368 + 0.991908545889416 NA Intergenic CpG -20929 NM_001033219 106068 Mm.212813 NM_001033219 ENSMUSG00000079020 Slc45a4 9330175B01Rik|AW552276 solute carrier family 45, member 4 protein-coding common_peak1_38_197_0.243586829528251_7.75115003484373_0.991611875372029 chr11 70014759 70015363 + 0.991611875372029 NA intron (NM_017366, intron 2 of 19) intron (NM_017366, intron 2 of 19) 367 NM_017366 11370 Mm.18630 NM_017366 ENSMUSG00000018574 Acadvl vlcad acyl-Coenzyme A dehydrogenase, very long chain protein-coding common_peak2_38_197_0.243586829528251_7.75115003484373_0.991611875372029 chr3 129601931 129602966 + 0.991611875372029 NA intron (NM_130450, intron 2 of 4) intron (NM_130450, intron 2 of 4) 70062 NM_130450 170439 Mm.314113 NM_130450 ENSMUSG00000041220 Elovl6 C77826|FAE|LCE ELOVL family member 6, elongation of long chain fatty acids (yeast) protein-coding common_peak1_36_259_-0.242584161817044_7.90107573211993_0.991315671064862 chr7 12961282 12961958 + 0.991315671064862 NA Intergenic Intergenic -4244 NM_178732 243834 Mm.133086 NM_178732 ENSMUSG00000004500 Zfp324 A930002M05|D430030K24Rik|ZF5128 zinc finger protein 324 protein-coding common_peak1_36_259_-0.242584161817044_7.90107573211993_0.991315671064862-2 chr7 19344597 19345531 + 0.991315671064862 NA promoter-TSS (NM_001127324) promoter-TSS (NM_001127324) -7 NM_001127324 13870 Mm.280913 NM_007948 ENSMUSG00000003549 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 protein-coding common_peak1_128_1099_-0.113426122004789_10.0465747474096_0.991230240073271 chr9 37347681 37348947 + 0.991230240073271 NA promoter-TSS (NM_001081429) promoter-TSS (NM_001081429) 78 NM_001081429 245902 Mm.390150 NM_001081429 ENSMUSG00000034303 Ccdc15 A630039F14Rik|D030074L19 coiled-coil domain containing 15 protein-coding common_peak2_43_232_0.222223909226027_7.97529809926729_0.99111183375642-3 chr18 39019948 39021370 + 0.99111183375642 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 27514 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak2_43_232_0.222223909226027_7.97529809926729_0.99111183375642 chr11 3538743 3540102 + 0.99111183375642 NA promoter-TSS (NM_013870) promoter-TSS (NM_013870) -130 NM_001284428 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding common_peak2_43_232_0.222223909226027_7.97529809926729_0.99111183375642-2 chr12 26468931 26470094 + 0.99111183375642 NA exon (NM_020557, exon 1 of 5) exon (NM_020557, exon 1 of 5) 297 NM_020557 22169 Mm.271839 NM_020557 ENSMUSG00000020638 Cmpk2 1200004E04Rik|TDKI|Tyki cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial protein-coding common_peak2_43_232_0.222223909226027_7.97529809926729_0.99111183375642-4 chr4 117681416 117682631 + 0.99111183375642 NA intron (NM_023178, intron 1 of 10) CpG 202 NM_023178 66233 Mm.29142 NM_023178 ENSMUSG00000009640 Dmap1 1500016M21Rik|DNMAP1|DNMTAP1|Dmtap1|mKIAA1425 DNA methyltransferase 1-associated protein 1 protein-coding common_peak2_76_483_0.157858303498472_8.99779238902383_0.991036729760641 chr13 52576941 52578957 + 0.991036729760641 NA Intergenic Intergenic -4724 NR_046069 100040572 Mm.278873 NR_046069 Gm2848 - predicted gene 2848 ncRNA unique_peak2_24_167_-0.306302230642377_7.23916630745757_0.990944465647887 chr1 87866062 87867415 + 0.990944465647887 NA intron (NM_177646, intron 1 of 29) RLTR14_RN|LTR|ERV1 13451 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak2_24_167_-0.306302230642377_7.23916630745757_0.990944465647887 chr12 40248162 40248973 + 0.990944465647887 NA Intergenic Intergenic 25203 NR_045157 629820 Mm.435540 NR_045157 ENSMUSG00000035983 Gm7008 EG629820 predicted gene 7008 ncRNA common_peak1_161_1439_-0.0988987021504393_10.4424037452545_0.990353901294991 chr11 109859388 109861006 + 0.990353901294991 NA Intergenic Intergenic 14319 NR_045909 73257 Mm.250442 NR_045909 ENSMUSG00000087393 1700023C21Rik - RIKEN cDNA 1700023C21 gene ncRNA common_peak1_19_79_0.369206132743414_6.50653116125907_0.990270949802597-2 chr8 116946882 116947281 + 0.990270949802597 NA intron (NM_177700, intron 1 of 3) B3A|SINE|B2 3688 NM_177700 234776 Mm.259736 NM_177700 ENSMUSG00000047388 Atmin Asciz|gpg6|mKIAA0431 ATM interactor protein-coding common_peak1_15_103_-0.404186455015924_6.49834649063313_0.990270949802597-2 chr5 64808708 64809171 + 0.990270949802597 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 5416 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding unique_peak2_15_103_-0.404186455015924_6.49834649063313_0.990270949802597 chr1 9236879 9237995 + 0.990270949802597 NA intron (NM_001290390, intron 1 of 20) MMVL30-int|LTR|ERV1 62440 NM_001290390 71096 Mm.336395 NM_027671 ENSMUSG00000025909 Sntg1 4933426D16Rik|G1SYN|SYN4 syntrophin, gamma 1 protein-coding common_peak1_15_103_-0.404186455015924_6.49834649063313_0.990270949802597 chr14 60742507 60742902 + 0.990270949802597 NA intron (NM_001310594, intron 1 of 9) intron (NM_001310594, intron 1 of 9) 9800 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak2_19_79_0.369206132743414_6.50653116125907_0.990270949802597 chr7 63858535 63859249 + 0.990270949802597 NA Intergenic Intergenic -57965 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak1_19_79_0.369206132743414_6.50653116125907_0.990270949802597 chr7 29518857 29519281 + 0.990270949802597 NA Intergenic CpG -13609 NM_001081028 74206 Mm.447042 NM_001081028 ENSMUSG00000030583 Sipa1l3 2610511M17Rik signal-induced proliferation-associated 1 like 3 protein-coding unique_peak2_15_103_-0.404186455015924_6.49834649063313_0.990270949802597-2 chr16 55757699 55758352 + 0.990270949802597 NA Intergenic Intergenic 64113 NM_001159394 80859 Mm.247272 NM_030612 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta protein-coding common_peak2_80_637_-0.151070530771991_9.24187734837887_0.99003860028109 chr9 94690832 94692882 + 0.99003860028109 NA intron (NM_177909, intron 2 of 15) intron (NM_177909, intron 2 of 15) 21965 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak1_291_2639_0.0692214345125244_11.4009329315021_0.990035021245976 chr8 115705980 115708532 + 0.990035021245976 NA promoter-TSS (NM_001025577) promoter-TSS (NM_001025577) -362 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak1_164_1470_-0.0971559967156281_10.474003532897_0.989999488195496 chr9 70542264 70543694 + 0.989999488195496 NA exon (NM_025690, exon 1 of 21) exon (NM_025690, exon 1 of 21) 109 NM_025690 66660 Mm.22379 NM_025690 ENSMUSG00000032212 Sltm 5730455C01Rik|5730555F13Rik|9130215G10Rik|Met SAFB-like, transcription modulator protein-coding common_peak2_252_2446_-0.0749561688580265_11.2193203016504_0.989976300878476 chr18 56707037 56710248 + 0.989976300878476 NA intron (NM_010721, intron 1 of 10) CpG 829 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak2_123_1049_-0.116266785446467_9.97804021983025_0.989883606812313 chr7 126648433 126650455 + 0.989883606812313 NA 5' UTR (NM_029339, exon 1 of 10) 5' UTR (NM_029339, exon 1 of 10) 135 NM_029339 75565 Mm.45686 NM_029339 ENSMUSG00000030714 Sgf29 1700023O11Rik|9530025I05Rik|Ccdc101 SAGA complex associated factor 29 protein-coding common_peak2_54_311_0.195888799523667_8.38334661862408_0.989424304938419 chr6 88464887 88466339 + 0.989424304938419 NA exon (NM_019685, exon 1 of 11) exon (NM_019685, exon 1 of 11) 190 NM_019685 56505 Mm.42195 NM_019685 ENSMUSG00000030079 Ruvbl1 2510009G06Rik|Pontin52|Tip49a RuvB-like protein 1 protein-coding common_peak1_74_467_0.159784988706262_8.95025721393653_0.989249553390088 chr10 94514688 94515764 + 0.989249553390088 NA intron (NM_172051, intron 1 of 3) CpG 369 NM_172051 319880 Mm.23047 NM_172051 ENSMUSG00000020023 Tmcc3 AW488095|C630016B22Rik|C88213|Tmcc1 transmembrane and coiled coil domains 3 protein-coding common_peak2_96_786_-0.134881462144078_9.55277909443545_0.989121457292376 chr6 31208333 31210826 + 0.989121457292376 NA intron (NR_110469, intron 1 of 3) intron (NR_110469, intron 1 of 3) 8895 NR_110470 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak2_85_557_0.148218169611118_9.19823039663475_0.989002953384524 chr6 56919558 56922220 + 0.989002953384524 NA intron (NM_026004, intron 1 of 8) intron (NM_026004, intron 1 of 8) 3043 NM_026004 107569 Mm.158936 NM_026004 ENSMUSG00000029780 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III protein-coding common_peak2_131_1129_-0.111562487268959_10.0863258136681_0.988979710627901 chr5 38863812 38866476 + 0.988979710627901 NA intron (NM_013748, intron 1 of 18) intron (NM_013748, intron 1 of 18) 11549 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak1_20_138_-0.34146642892501_6.948207858261_0.988961366205028 chr16 87712513 87713010 + 0.988961366205028 NA intron (NM_007520, intron 1 of 4) intron (NM_007520, intron 1 of 4) 13807 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak2_306_2810_0.0673235335197937_11.4905295051402_0.988757449498645 chr5 113840436 113843947 + 0.988757449498645 NA TTS (NM_011779) TTS (NM_011779) -11690 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding unique_peak2_33_235_-0.252494477201314_7.75639581076118_0.988414302801863-2 chr8 90797184 90799242 + 0.988414302801863 NA Intergenic MTA_Mm|LTR|ERVL-MaLR -30622 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_33_235_-0.252494477201314_7.75639581076118_0.988414302801863 chr17 81064391 81065250 + 0.988414302801863 NA intron (NM_028138, intron 1 of 9) intron (NM_028138, intron 1 of 9) 265 NM_028138 72167 Mm.273257 NM_028138 ENSMUSG00000024246 Thumpd2 2810025A12Rik THUMP domain containing 2 protein-coding common_peak2_33_235_-0.252494477201314_7.75639581076118_0.988414302801863-2 chr4 155207307 155208767 + 0.988414302801863 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 14498 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak2_33_235_-0.252494477201314_7.75639581076118_0.988414302801863-3 chr9 99008593 99010099 + 0.988414302801863 NA exon (NM_001080776, exon 7 of 8) exon (NM_001080776, exon 7 of 8) 22973 NM_011810 23873 Mm.74605 NM_011810 ENSMUSG00000032463 Faim - Fas apoptotic inhibitory molecule protein-coding unique_peak2_33_235_-0.252494477201314_7.75639581076118_0.988414302801863 chr14 36316893 36318009 + 0.988414302801863 NA Intergenic Intergenic 222486 NM_175008 218921 Mm.212464 NM_175008 ENSMUSG00000096405 4930474N05Rik - RIKEN cDNA 4930474N05 gene protein-coding common_peak1_176_1598_-0.0932933022852236_10.5963075723377_0.988347631415279 chr2 180709296 180711094 + 0.988347631415279 NA promoter-TSS (NM_001289651) promoter-TSS (NM_001289651) -31 NM_001289652 76425 Mm.41464 NM_029607 ENSMUSG00000027573 Gid8 2310003C23Rik|4833420G11Rik|AI451474|Twa1 GID complex subunit 8 protein-coding common_peak1_363_3480_0.0602835663690762_11.7954278819082_0.988255793120107 chr6 124739895 124742377 + 0.988255793120107 NA promoter-TSS (NM_013535) promoter-TSS (NM_013535) -57 NM_013535 14790 Mm.439877 NM_013535 ENSMUSG00000072772 Grcc10 2310033H05Rik|C10 gene rich cluster, C10 gene protein-coding common_peak1_23_102_0.327274940908876_6.85013799763766_0.987881787277049-2 chr12 83922191 83922567 + 0.987881787277049 NA promoter-TSS (NR_073564) promoter-TSS (NR_073564) -445 NR_073564 18222 Mm.4390 NM_010949 ENSMUSG00000021224 Numb Nb numb homolog (Drosophila) protein-coding common_peak1_23_102_0.327274940908876_6.85013799763766_0.987881787277049-4 chr2 33034866 33035422 + 0.987881787277049 NA intron (NM_178888, intron 8 of 28) intron (NM_178888, intron 8 of 28) 52060 NM_178888 99326 Mm.41290 NM_178888 ENSMUSG00000038860 Garnl3 AW120551 GTPase activating RANGAP domain-like 3 protein-coding unique_peak2_23_102_0.327274940908876_6.85013799763766_0.987881787277049 chr11 119846439 119847294 + 0.987881787277049 NA exon (NM_001306081, exon 15 of 33) exon (NM_001306081, exon 15 of 33) -12501 NR_045312 319454 Mm.442144 NR_045312 ENSMUSG00000085081 Rptoros A430071A18Rik regulatory associated protein of MTOR, complex 1, opposite strand ncRNA common_peak1_23_102_0.327274940908876_6.85013799763766_0.987881787277049-3 chr14 103468701 103469242 + 0.987881787277049 NA Intergenic Intergenic -44370 NM_022886 64929 Mm.244003 NM_022886 ENSMUSG00000022123 Scel 9230114I02Rik sciellin protein-coding common_peak1_23_102_0.327274940908876_6.85013799763766_0.987881787277049 chr1 80669993 80670544 + 0.987881787277049 NA intron (NM_175291, intron 1 of 55) MLT1E1|LTR|ERVL-MaLR -4916 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak1_23_102_0.327274940908876_6.85013799763766_0.987881787277049-5 chr9 35113974 35114459 + 0.987881787277049 NA intron (NM_009178, intron 1 of 10) intron (NM_009178, intron 1 of 10) -2512 NR_029475 78934 Mm.391688 NR_029475 ENSMUSG00000070315 4930581F22Rik - RIKEN cDNA 4930581F22 gene ncRNA unique_peak2_23_102_0.327274940908876_6.85013799763766_0.987881787277049-2 chr9 99109052 99109925 + 0.987881787277049 NA intron (NM_029094, intron 2 of 23) intron (NM_029094, intron 2 of 23) 30723 NM_029094 74769 Mm.213128 NM_029094 ENSMUSG00000032462 Pik3cb 1110001J02Rik|AI447572|p110beta phosphatidylinositol 3-kinase, catalytic, beta polypeptide protein-coding common_peak2_56_326_0.19135189405209_8.44882277252413_0.987783005344442 chr1 58953267 58954572 + 0.987783005344442 NA intron (NM_172406, intron 1 of 15) intron (NM_172406, intron 1 of 15) 19563 NM_172406 70827 Mm.222887 NM_172406 ENSMUSG00000026028 Trak2 2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549 trafficking protein, kinesin binding 2 protein-coding common_peak1_27_189_-0.283290858313022_7.42821017917444_0.987509031497037 chr9 95856969 95857544 + 0.987509031497037 NA promoter-TSS (NM_019864) promoter-TSS (NM_019864) 261 NR_073361 73410 Mm.443314 NM_028533 ENSMUSG00000096655 1700065D16Rik - RIKEN cDNA 1700065D16 gene protein-coding common_peak2_27_189_-0.283290858313022_7.42821017917444_0.987509031497037 chr10 19208884 19210029 + 0.987509031497037 NA Intergenic Intergenic 42218 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_165_1293_0.0984962783621963_10.3868700411736_0.987473587500808 chr1 93444807 93446159 + 0.987473587500808 NA intron (NM_133808, intron 1 of 27) CpG 218 NM_001301364 110611 Mm.30012 NM_133808 ENSMUSG00000034088 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein protein-coding common_peak2_99_677_0.134098351372751_9.47219063882272_0.987261845223662 chr19 20389258 20391555 + 0.987261845223662 NA intron (NM_010730, intron 1 of 12) intron (NM_010730, intron 1 of 12) 265 NM_010730 16952 Mm.248360 NM_010730 ENSMUSG00000024659 Anxa1 Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1 annexin A1 protein-coding common_peak2_76_600_-0.15449963993812_9.15397136074213_0.98707506361283 chr6 18844876 18846685 + 0.98707506361283 NA Intergenic MMVL30-int|LTR|ERV1 -2855 NM_133939 76522 Mm.275158 NM_133939 ENSMUSG00000044155 Lsm8 2010003I05Rik|AW214405|Naa38 LSM8 homolog, U6 small nuclear RNA associated protein-coding common_peak1_156_1386_-0.100276437917953_10.3876138533646_0.986961114711525 chr15 82345653 82347095 + 0.986961114711525 NA TTS (NM_177391) TTS (NM_177391) 328 NM_026914 69029 Mm.260042 NM_026914 ENSMUSG00000022452 Smdt1 1500032L24Rik|Emre single-pass membrane protein with aspartate rich tail 1 protein-coding common_peak1_52_389_-0.191588548306498_8.51153603959636_0.986877094579243 chr4 156200375 156201298 + 0.986877094579243 NA promoter-TSS (NM_015783) promoter-TSS (NM_015783) -18 NM_015783 100038882 Mm.4950 NM_015783 ENSMUSG00000035692 Isg15 G1p2|IGI15|IP17|Irfp|UCRP ISG15 ubiquitin-like modifier protein-coding common_peak1_45_246_0.216705883695187_8.05672017343227_0.986555983490072-2 chr3 96560427 96561438 + 0.986555983490072 NA 3' UTR (NM_001009935, exon 8 of 8) 3' UTR (NM_001009935, exon 8 of 8) 2975 NM_023719 56338 Mm.410189 NM_023719 ENSMUSG00000038393 Txnip 1200008J08Rik|AA682105|Hyplip1|THIF|Tbp-2|VDUP1 thioredoxin interacting protein protein-coding common_peak1_45_246_0.216705883695187_8.05672017343227_0.986555983490072 chr1 37540399 37541137 + 0.986555983490072 NA intron (NM_173870, intron 1 of 15) CpG 248 NM_173870 269181 Mm.25861 NM_173870 ENSMUSG00000026110 Mgat4a 9530018I07Rik|GnT-IVa|glcNAc-T-IVa mannoside acetylglucosaminyltransferase 4, isoenzyme A protein-coding common_peak2_106_881_-0.125664426201748_9.72180263245665_0.986369363574955 chr11 65787246 65788835 + 0.986369363574955 NA intron (NM_001316368, intron 1 of 10) CpG 319 NM_009157 26398 Mm.412922 NM_009157 ENSMUSG00000033352 Map2k4 JNKK1|MEK4|MKK4|PRKMK4|Sek1|Serk1 mitogen-activated protein kinase kinase 4 protein-coding common_peak1_310_3131_-0.0657691061569761_11.5799839442126_0.986292493520629 chr4 59188569 59191757 + 0.986292493520629 NA intron (NM_011673, intron 1 of 8) intron (NM_011673, intron 1 of 8) 613 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak1_318_2949_0.0655454885038562_11.5592719833885_0.986204348892563 chr3 52267470 52270172 + 0.986204348892563 NA exon (NM_019739, exon 1 of 3) exon (NM_019739, exon 1 of 3) 484 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak2_177_1413_0.0940642751411449_10.51259854238_0.986036549027647 chr8 82773013 82775152 + 0.986036549027647 NA promoter-TSS (NM_145600) promoter-TSS (NM_145600) 44 NM_145600 30932 Mm.269248 NM_145600 ENSMUSG00000031711 Zfp330 BC008086|Noa36|Znf330 zinc finger protein 330 protein-coding common_peak1_121_1029_-0.117296859837252_9.94978019215196_0.986010335173421 chr11 64015705 64017786 + 0.986010335173421 NA intron (NM_178379, intron 4 of 6) intron (NM_178379, intron 4 of 6) 52519 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak2_220_2081_-0.0812131772504117_10.9831477646742_0.985918403807793 chr14 20544903 20547294 + 0.985918403807793 NA promoter-TSS (NR_033571) promoter-TSS (NR_033571) -195 NR_033571 75602 Mm.437061 NR_033571 ENSMUSG00000084925 1810062O18Rik - RIKEN cDNA 1810062O18 gene ncRNA common_peak1_13_48_0.445242594716362_5.83733114147339_0.985819031340023 chr1 34851168 34851563 + 0.985819031340023 NA intron (NM_145516, intron 1 of 7) intron (NM_145516, intron 1 of 7) 1406 NM_145516 226971 Mm.292751 NM_145516 ENSMUSG00000026123 Plekhb2 2310009M15Rik|AU018239|Evt2|Phdc|evt-2 pleckstrin homology domain containing, family B (evectins) member 2 protein-coding common_peak1_13_48_0.445242594716362_5.83733114147339_0.985819031340023-4 chr2 166034966 166035337 + 0.985819031340023 NA intron (NM_008679, intron 2 of 22) intron (NM_008679, intron 2 of 22) 42514 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak1_13_48_0.445242594716362_5.83733114147339_0.985819031340023-3 chr18 90579045 90579383 + 0.985819031340023 NA Intergenic RMER10B|LTR|ERVL 69060 NM_198295 67988 Mm.268041 NM_198295 ENSMUSG00000024614 Tmx3 6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830 thioredoxin-related transmembrane protein 3 protein-coding common_peak1_13_48_0.445242594716362_5.83733114147339_0.985819031340023-2 chr10 44429229 44429634 + 0.985819031340023 NA Intergenic Intergenic 29317 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding common_peak2_66_403_0.172332217397928_8.74437759145076_0.985792375023664 chr5 144965224 144966466 + 0.985792375023664 NA promoter-TSS (NM_001038627) promoter-TSS (NM_001038627) -15 NM_001038627 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding common_peak2_35_177_0.255564242092626_7.60351555201271_0.985774056187517 chr8 11202705 11203555 + 0.985774056187517 NA intron (NM_009931, intron 49 of 51) intron (NM_009931, intron 49 of 51) -109675 NM_009932 12827 Mm.181021 NM_009932 ENSMUSG00000031503 Col4a2 Col4a-2 collagen, type IV, alpha 2 protein-coding common_peak2_38_274_-0.230344358804161_7.98811562900994_0.985666799495094 chr6 52476747 52478450 + 0.985666799495094 NA Intergenic Intergenic -14853 NR_046049 74304 Mm.490579 NR_046049 ENSMUSG00000107895 1700094M24Rik - RIKEN cDNA 1700094M24 gene ncRNA common_peak1_111_930_-0.122847985168157_9.80121336497472_0.985519003558763 chr4 156025706 156026973 + 0.985519003558763 NA promoter-TSS (NM_009400) promoter-TSS (NM_009400) -3 NM_009400 21936 Mm.3180 NM_009400 ENSMUSG00000041954 Tnfrsf18 AITR|Gitr tumor necrosis factor receptor superfamily, member 18 protein-coding common_peak1_62_372_0.178577339696545_8.63232049010351_0.985195567642818 chr8 79398466 79399436 + 0.985195567642818 NA intron (NM_008539, intron 1 of 6) CpG 517 NM_008539 17125 Mm.223717 NM_008539 ENSMUSG00000031681 Smad1 AI528653|Madh1|Madr1|Mlp1|MusMLP SMAD family member 1 protein-coding common_peak2_58_342_0.183461638869012_8.51379558560732_0.985000498488179 chr1 118321344 118322605 + 0.985000498488179 NA exon (NM_026472, exon 1 of 7) exon (NM_026472, exon 1 of 7) 131 NM_026472 67949 Mm.280311 NM_026472 ENSMUSG00000026377 Nifk AI852665|C130020J04Rik|Mki67ip nucleolar protein interacting with the FHA domain of MKI67 protein-coding common_peak2_58_342_0.183461638869012_8.51379558560732_0.985000498488179-2 chr14 122985795 122987149 + 0.985000498488179 NA Intergenic A-rich|Low_complexity|Low_complexity -3211 NM_028651 70551 Mm.271988 NM_028651 ENSMUSG00000041594 Tmtc4 4930403J22Rik|5730419O14Rik transmembrane and tetratricopeptide repeat containing 4 protein-coding common_peak1_154_1186_0.101683571970721_10.2639460056273_0.984748313390739 chr3 96576164 96577743 + 0.984748313390739 NA TTS (NM_001293701) TTS (NM_001293701) -10152 NR_040409 100038464 Mm.475126 NR_040409 ENSMUSG00000074398 Gm15441 ENSMUSG00000074398|OTTMUSG00000021867 predicted gene 15441 ncRNA common_peak2_81_524_0.151881963698298_9.11211459440263_0.984180686922717 chr8 109704646 109706757 + 0.984180686922717 NA promoter-TSS (NM_029468) promoter-TSS (NM_029468) 155 NM_001167946 75871 Mm.180410 NM_029468 ENSMUSG00000031728 Zfp821 4930566A11Rik|Znf821 zinc finger protein 821 protein-coding common_peak2_174_1576_-0.0934156433886564_10.5762591230962_0.984016294245156 chr6 70843409 70845492 + 0.984016294245156 NA promoter-TSS (NM_001313918) promoter-TSS (NM_001313918) -65 NM_010121 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak1_254_2469_-0.0745189624662626_11.2330358452389_0.983393027838481 chr1 97660639 97662683 + 0.983393027838481 NA intron (NM_133825, intron 1 of 2) CpG 357 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak2_47_260_0.212481782708567_8.13414688792417_0.983245454481249 chr10 62327113 62328592 + 0.983245454481249 NA intron (NM_010438, intron 4 of 21) intron (NM_010438, intron 4 of 21) 12569 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak1_231_1976_0.079403092342428_10.9887987019004_0.9832219599855 chr9 32905758 32909588 + 0.9832219599855 NA intron (NR_131058, intron 3 of 3) intron (NR_131058, intron 3 of 3) 21293 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA unique_peak2_14_96_-0.41786872077578_6.39097848179924_0.982853343757796-2 chr18 79257218 79258035 + 0.982853343757796 NA Intergenic Intergenic -148235 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding unique_peak2_14_96_-0.41786872077578_6.39097848179924_0.982853343757796-3 chr3 60519325 60520275 + 0.982853343757796 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 18621 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding unique_peak2_14_96_-0.41786872077578_6.39097848179924_0.982853343757796 chr12 108056142 108056846 + 0.982853343757796 NA Intergenic RMER19B|LTR|ERVK -53080 NM_021399 58208 Mm.392694 NM_021399 ENSMUSG00000048251 Bcl11b 9130430L19Rik|AI604821|B630002E05Rik|BCL-11B|Ctip2|Rit1 B cell leukemia/lymphoma 11B protein-coding common_peak1_14_96_-0.41786872077578_6.39097848179924_0.982853343757796 chr6 90749689 90750079 + 0.982853343757796 NA intron (NM_001134384, intron 1 of 13) intron (NM_001134384, intron 1 of 13) -33355 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak2_473_5197_-0.0508950000192439_12.3182934184626_0.982182307325394 chr19 46499269 46505622 + 0.982182307325394 NA exon (NM_053100, exon 1 of 6) exon (NM_053100, exon 1 of 6) 797 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_66_510_-0.166635780787898_8.91386159054367_0.982093723579642 chr4 48039016 48041124 + 0.982093723579642 NA Intergenic Intergenic -5235 NM_015743 18124 Mm.247261 NM_015743 ENSMUSG00000028341 Nr4a3 AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC nuclear receptor subfamily 4, group A, member 3 protein-coding unique_peak2_19_130_-0.342288773906674_6.86227861458411_0.981959330830781 chr1 172305575 172306423 + 0.981959330830781 NA Intergenic Intergenic -6368 NM_080419 140559 Mm.271717 NM_080419 ENSMUSG00000038034 Igsf8 ESTM34|EWI-2|KCT-4|PGRL immunoglobulin superfamily, member 8 protein-coding common_peak1_19_130_-0.342288773906674_6.86227861458411_0.981959330830781 chr3 146780093 146780562 + 0.981959330830781 NA intron (NM_011100, intron 1 of 9) intron (NM_011100, intron 1 of 9) 1089 NM_001164200 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak1_19_130_-0.342288773906674_6.86227861458411_0.981959330830781-2 chr4 140868846 140869251 + 0.981959330830781 NA Intergenic Intergenic -3645 NR_040654 75128 Mm.67085 NR_040654 ENSMUSG00000087045 4930515B02Rik - RIKEN cDNA 4930515B02 gene ncRNA common_peak2_157_1396_-0.0994049031097912_10.3984138538546_0.981878168253267 chr1 133820138 133823047 + 0.981878168253267 NA Intergenic Intergenic -67845 NM_213616 381290 Mm.188617 NM_213616 ENSMUSG00000026463 Atp2b4 Pmca4 ATPase, Ca++ transporting, plasma membrane 4 protein-coding common_peak2_143_1251_-0.105496551500883_10.2372705711822_0.981751799604367 chr17 84789655 84791840 + 0.981751799604367 NA promoter-TSS (NM_028233) promoter-TSS (NM_028233) 39 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak2_202_1880_-0.085084709745157_10.8347417786506_0.981696402203682 chr5 135961074 135963674 + 0.981696402203682 NA intron (NM_001160366, intron 9 of 10) intron (NM_001160366, intron 9 of 10) 12102 NM_001160366 109267 Mm.332750 NM_001160366 ENSMUSG00000029699 Ssc4d C330016E03Rik|S4D-SRCRB|SRCRB-S4D|Srcrb4d scavenger receptor cysteine rich family, 4 domains protein-coding common_peak1_258_2515_-0.0735964464024068_11.2601179836781_0.981668308696011 chr13 48545279 48546747 + 0.981668308696011 NA Intergenic CpG -7741 NR_029725 387244 NR_029725 ENSMUSG00000065421 Mirlet7a-1 Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1 microRNA let7a-1 ncRNA common_peak2_62_475_-0.17320860335616_8.80821346162986_0.981433573342638 chr14 79540881 79543265 + 0.981433573342638 NA intron (NM_001286411, intron 2 of 8) B2_Mm2|SINE|B2 26399 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak1_62_475_-0.17320860335616_8.80821346162986_0.981433573342638-2 chrX 135742161 135743266 + 0.981433573342638 NA promoter-TSS (NM_001005385) promoter-TSS (NM_001005385) 21 NM_001005385 67298 Mm.271980 NM_026081 ENSMUSG00000043384 Gprasp1 2210415K24Rik|3110031O14Rik|C87852|GASP|GASP1 G protein-coupled receptor associated sorting protein 1 protein-coding common_peak1_62_475_-0.17320860335616_8.80821346162986_0.981433573342638 chr9 110675743 110676742 + 0.981433573342638 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 19739 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak1_26_120_0.303344329565_7.07053540205709_0.981239027770971 chr2 37703540 37704007 + 0.981239027770971 NA Intergenic CpG -56488 NM_009261 20744 Mm.237095 NM_009261 ENSMUSG00000026915 Strbp 6430510M02Rik|AI852513|C230082I21Rik|C86322|Spnr spermatid perinuclear RNA binding protein protein-coding common_peak2_26_120_0.303344329565_7.07053540205709_0.981239027770971 chr16 90934258 90934929 + 0.981239027770971 NA exon (NM_026502, exon 1 of 7) exon (NM_026502, exon 1 of 7) 256 NM_026502 68001 Mm.45374 NM_026502 ENSMUSG00000022972 1110004E09Rik - RIKEN cDNA 1110004E09 gene protein-coding common_peak2_26_120_0.303344329565_7.07053540205709_0.981239027770971-2 chr17 23748886 23749678 + 0.981239027770971 NA promoter-TSS (NR_015472) promoter-TSS (NR_015472) 46 NR_015472 638247 Mm.382600 NR_015472 ENSMUSG00000097006 9530082P21Rik E030034P13Rik RIKEN cDNA 9530082P21 gene ncRNA common_peak1_58_441_-0.182376154349607_8.69671448221663_0.981120323487586 chr17 26243495 26244443 + 0.981120323487586 NA intron (NM_001206335, intron 1 of 12) CpG 273 NM_207217 106581 Mm.28844 NM_207217 ENSMUSG00000024187 Fam234a Itfg3 family with sequence similarity 234, member A protein-coding common_peak1_12_43_0.46937731481728_5.69412027604594_0.980945783223891 chr4 135071787 135072177 + 0.980945783223891 NA Intergenic B4|SINE|B4 -48663 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding unique_peak1_12_43_0.46937731481728_5.69412027604594_0.980945783223891 chr2 80580663 80581069 + 0.980945783223891 NA exon (NM_016965, exon 1 of 31) exon (NM_016965, exon 1 of 31) 316 NM_001290745 50884 Mm.25203 NM_016965 ENSMUSG00000027002 Nckap1 C79304|H19|Hem-2|Hem2|Nap1|mKIAA0587|mh19|p125Nap1 NCK-associated protein 1 protein-coding common_peak1_23_159_-0.308152626795268_7.16785178148973_0.980847667787017 chr17 29499267 29499848 + 0.980847667787017 NA Intergenic Intergenic 8512 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_235_2019_0.0786114497753818_11.0194453025268_0.980798836007006 chr2 32586511 32588904 + 0.980798836007006 NA intron (NM_011373, intron 1 of 4) intron (NM_011373, intron 1 of 4) 629 NM_011373 20448 Mm.27446 NM_011373 ENSMUSG00000079442 St6galnac4 SIAT7-D|ST6GalNAcIV|Siat7d ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 protein-coding common_peak2_117_838_0.119611715788357_9.772332858334_0.980717374303049 chr3 87905605 87908036 + 0.980717374303049 NA intron (NM_008231, intron 1 of 5) CpG 499 NM_008231 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding common_peak1_163_1459_-0.0970847663292407_10.4632102706028_0.980586472130831 chrX 73910000 73912058 + 0.980586472130831 NA intron (NM_138630, intron 1 of 21) intron (NM_138630, intron 1 of 21) 269 NM_138630 171207 Mm.482337 NM_138630 ENSMUSG00000031389 Arhgap4 A130009C12Rik|A530015A20Rik|Rgc1|c1|mKIAA0131 Rho GTPase activating protein 4 protein-coding common_peak1_32_158_0.264436992376524_7.44510145147262_0.979617356754386 chr15 98927625 98928321 + 0.979617356754386 NA Intergenic Intergenic 6417 NM_011654 22143 Mm.392113 NM_011654 ENSMUSG00000023004 Tuba1b Tuba2 tubulin, alpha 1B protein-coding common_peak1_32_158_0.264436992376524_7.44510145147262_0.979617356754386-2 chr5 139057601 139058432 + 0.979617356754386 NA intron (NM_001253890, intron 6 of 10) intron (NM_001253890, intron 6 of 10) -63063 NM_008808 18590 Mm.2675 NM_008808 ENSMUSG00000025856 Pdgfa - platelet derived growth factor, alpha protein-coding common_peak2_232_1987_0.0790095193115619_10.9966068012181_0.979548835506601 chr5 5418829 5421412 + 0.979548835506601 NA Intergenic Intergenic -39869 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding common_peak2_313_2892_0.0657373376624069_11.5312192767608_0.979528090292276 chr19 32755372 32759181 + 0.979528090292276 NA promoter-TSS (NM_008960) promoter-TSS (NM_008960) -301 NM_008960 19211 Mm.245395 NM_008960 ENSMUSG00000013663 Pten 2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1 phosphatase and tensin homolog protein-coding common_peak1_47_347_-0.202555716570277_8.34166563756359_0.97911348364061 chr5 129715141 129716122 + 0.97911348364061 NA intron (NM_025450, intron 1 of 3) CpG 103 NM_025450 66258 Mm.249809 NM_025450 ENSMUSG00000034211 Mrps17 1810006P02Rik|Mprs17 mitochondrial ribosomal protein S17 protein-coding common_peak2_295_2685_0.0683769953430353_11.425432087099_0.978509743808415 chr16 78574048 78578595 + 0.978509743808415 NA 5' UTR (NM_001252438, exon 1 of 5) 5' UTR (NM_001252438, exon 1 of 5) 367 NM_001252438 67102 Mm.37332 NM_025967 ENSMUSG00000022864 D16Ertd472e 1700010I10Rik|2310009O17Rik|E330003K22Rik|Eurl DNA segment, Chr 16, ERATO Doi 472, expressed protein-coding common_peak1_29_139_0.279373415652737_7.26896972477133_0.977502383186058-2 chr4 7596039 7596786 + 0.977502383186058 NA Intergenic Intergenic 35724 NR_040645 71510 Mm.410775 NR_040645 ENSMUSG00000086070 8430436N08Rik - RIKEN cDNA 8430436N08 gene ncRNA common_peak1_29_139_0.279373415652737_7.26896972477133_0.977502383186058-4 chrX 23692342 23692845 + 0.977502383186058 NA promoter-TSS (NM_175180) promoter-TSS (NM_175180) -458 NM_175180 72404 Mm.423 NM_175180 ENSMUSG00000036769 Wdr44 2610034K17Rik|RAB11BP|RPH11 WD repeat domain 44 protein-coding common_peak2_29_139_0.279373415652737_7.26896972477133_0.977502383186058 chr1 10217033 10217864 + 0.977502383186058 NA intron (NM_001102430, intron 1 of 37) intron (NM_001102430, intron 1 of 37) 15222 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak1_29_139_0.279373415652737_7.26896972477133_0.977502383186058-3 chr4 139310234 139310757 + 0.977502383186058 NA promoter-TSS (NM_025337) promoter-TSS (NM_025337) 205 NM_145384 212555 Mm.45131 NM_145384 ENSMUSG00000028744 Pqlc2 BC019216 PQ loop repeat containing 2 protein-coding common_peak1_29_139_0.279373415652737_7.26896972477133_0.977502383186058 chr2 128155004 128155699 + 0.977502383186058 NA intron (NM_009754, intron 3 of 3) intron (NM_009754, intron 3 of 3) 27776 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak1_105_730_0.128626480677031_9.57804083629095_0.977412730266158 chr17 22225055 22226331 + 0.977412730266158 NA promoter-TSS (NM_001205095) promoter-TSS (NM_001205095) -79 NM_001205095 240038 Mm.227945 NM_001205095 ENSMUSG00000096433 Zfp994 EG240038|Gm4944 zinc finger protein 994 protein-coding unique_peak2_42_225_0.225548207838763_7.93295306633457_0.977169032592372 chr17 5840726 5842037 + 0.977169032592372 NA promoter-TSS (NM_025664) promoter-TSS (NM_025664) 1 NM_025664 66616 Mm.89515 NM_025664 ENSMUSG00000002365 Snx9 2700073N08Rik|SDP1|SH3PX1 sorting nexin 9 protein-coding common_peak1_133_1148_-0.109007071310034_10.1116595469911_0.97716115427226 chr8 46868518 46870548 + 0.97716115427226 NA Intergenic Intergenic -117392 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding unique_peak2_13_89_-0.431900657498105_6.27590276758062_0.976994348301596-3 chr6 131276304 131277039 + 0.976994348301596 NA Intergenic Intergenic 16573 NM_025564 66441 Mm.46623 NM_025564 ENSMUSG00000030188 Magohb 2010012C16Rik|Mago|Magoh|Magoh-rs1 mago homolog B, exon junction complex core component protein-coding unique_peak2_13_89_-0.431900657498105_6.27590276758062_0.976994348301596-2 chr6 54959907 54960564 + 0.976994348301596 NA intron (NM_172729, intron 1 of 11) B4|SINE|B4 11426 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding unique_peak2_13_89_-0.431900657498105_6.27590276758062_0.976994348301596 chr4 42438808 42439489 + 0.976994348301596 NA intron (NM_001270431, intron 1 of 3).3 intron (NM_001270431, intron 1 of 3).3 173 NM_001270432 100862247 Mm.389537 NM_001270432 ENSMUSG00000095234 Gm21586 - predicted gene, 21586 protein-coding unique_peak2_13_89_-0.431900657498105_6.27590276758062_0.976994348301596-4 chrX 75059134 75059870 + 0.976994348301596 NA intron (NM_181584, intron 1 of 9) L1_Mus1|LINE|L1 25403 NM_181584 210710 Mm.267056 NM_181584 ENSMUSG00000032750 Gab3 5930433H21Rik growth factor receptor bound protein 2-associated protein 3 protein-coding common_peak1_26_181_-0.285587073359101_7.36500110351915_0.975904449826209-3 chr17 33552348 33552919 + 0.975904449826209 NA intron (NR_037707, intron 24 of 24) B1F|SINE|Alu -3074 NM_053214 17916 Mm.42019 NM_053214 ENSMUSG00000024300 Myo1f C330006B10Rik myosin IF protein-coding common_peak1_26_181_-0.285587073359101_7.36500110351915_0.975904449826209-2 chr15 81856203 81856736 + 0.975904449826209 NA intron (NM_020507, intron 1 of 1) intron (NM_020507, intron 1 of 1) 1857 NM_020507 57259 Mm.323595 NM_020507 ENSMUSG00000048546 Tob2 2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663 transducer of ERBB2, 2 protein-coding common_peak2_26_181_-0.285587073359101_7.36500110351915_0.975904449826209 chr2 117352137 117353411 + 0.975904449826209 NA Intergenic Intergenic -9897 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_26_181_-0.285587073359101_7.36500110351915_0.975904449826209-4 chr2 26380125 26380729 + 0.975904449826209 NA intron (NM_172339, intron 1 of 22) CpG 226 NM_172339 227644 Mm.207460 NM_172339 ENSMUSG00000036281 Snapc4 5730436L13Rik small nuclear RNA activating complex, polypeptide 4 protein-coding common_peak1_26_181_-0.285587073359101_7.36500110351915_0.975904449826209 chr1 153899216 153899732 + 0.975904449826209 NA promoter-TSS (NM_008131) promoter-TSS (NM_008131) -452 NR_106194 102466257 NR_106194 ENSMUSG00000099227 Mir8114 Gm27382|mmu-mir-8114 microRNA 8114 ncRNA common_peak2_267_2619_-0.0715827739023762_11.3195597094736_0.975478106970844 chr6 54947704 54953127 + 0.975478106970844 NA intron (NM_172729, intron 1 of 11) RLTR1D|LTR|ERV1 21246 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_105_871_-0.125830248147459_9.7052692007032_0.97530562160228 chr1 182367713 182370175 + 0.97530562160228 NA Intergenic Intergenic -27338 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_51_290_0.197158212919005_8.28345444936778_0.975302633915455 chr11 120467637 120468251 + 0.975302633915455 NA promoter-TSS (NM_197995) promoter-TSS (NM_197995) 309 NM_001159328 15239 Mm.7919 NM_008244 ENSMUSG00000025793 Hgs Hgr|Hrs|ZFYVE8|tn HGF-regulated tyrosine kinase substrate protein-coding common_peak2_51_290_0.197158212919005_8.28345444936778_0.975302633915455 chr2 155929593 155930746 + 0.975302633915455 NA non-coding (NR_024487, exon 1 of 10) non-coding (NR_024487, exon 1 of 10) 141 NM_018888 56046 Mm.158827 NM_018888 ENSMUSG00000005882 Uqcc1 2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding unique_peak2_49_364_-0.199125150444639_8.41219007854506_0.975271326086316 chr2 22780770 22783041 + 0.975271326086316 NA intron (NM_019456, intron 1 of 13) URR1B|DNA|hAT-Charlie 7578 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak2_32_227_-0.255570066503862_7.70510498091281_0.975125128398223 chr5 30949496 30950783 + 0.975125128398223 NA promoter-TSS (NM_021304) promoter-TSS (NM_021304) 33 NM_021304 57742 Mm.389615 NM_021304 ENSMUSG00000006638 Abhd1 LABH-1|LABH1 abhydrolase domain containing 1 protein-coding common_peak1_37_191_0.24201401386209_7.7059695076522_0.975125128398223 chr11 117328451 117329298 + 0.975125128398223 NA intron (NM_001113487, intron 2 of 10) intron (NM_001113487, intron 2 of 10) -2841 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_53_304_0.196154445575702_8.3507426552381_0.974953217435583 chr1 191717694 191718385 + 0.974953217435583 NA promoter-TSS (NM_001134829) promoter-TSS (NM_001134829) 15 NM_172266 226856 Mm.277958 NM_172266 ENSMUSG00000026623 Lpgat1 AI649174|AW112037|BC013667 lysophosphatidylglycerol acyltransferase 1 protein-coding common_peak1_285_2831_-0.0688028923142134_11.4332041039259_0.974834422063028-2 chr9 42096082 42098877 + 0.974834422063028 NA intron (NM_011436, intron 3 of 47) intron (NM_011436, intron 3 of 47) 26810 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak1_285_2831_-0.0688028923142134_11.4332041039259_0.974834422063028 chr15 6522152 6524599 + 0.974834422063028 NA Intergenic Intergenic -56472 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_18_74_0.37154551290101_6.41459144694639_0.974829861064463-4 chr9 105494196 105494702 + 0.974829861064463 NA 5' UTR (NM_001253834, exon 2 of 28) 5' UTR (NM_001253834, exon 2 of 28) 684 NM_175025 235574 Mm.326247 NM_175025 ENSMUSG00000032570 Atp2c1 1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1 ATPase, Ca++-sequestering protein-coding common_peak1_18_74_0.37154551290101_6.41459144694639_0.974829861064463 chr2 3755588 3755987 + 0.974829861064463 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 42329 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_18_74_0.37154551290101_6.41459144694639_0.974829861064463-3 chr2 167337600 167338032 + 0.974829861064463 NA intron (NM_019835, intron 1 of 8) intron (NM_019835, intron 1 of 8) 11362 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak1_18_74_0.37154551290101_6.41459144694639_0.974829861064463-2 chr2 126606321 126606797 + 0.974829861064463 NA intron (NM_008230, intron 3 of 11) intron (NM_008230, intron 3 of 11) 12119 NM_008230 15186 Mm.18603 NM_008230 ENSMUSG00000027360 Hdc AW108189|Hdc-a|Hdc-c|Hdc-e|Hdc-s histidine decarboxylase protein-coding common_peak2_18_74_0.37154551290101_6.41459144694639_0.974829861064463 chr7 49462256 49462874 + 0.974829861064463 NA intron (NM_001111016, intron 10 of 38) intron (NM_001111016, intron 10 of 38) 174270 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak2_91_609_0.139019994015975_9.32217542945824_0.974101943872242 chr9 107579987 107581625 + 0.974101943872242 NA promoter-TSS (NM_178020) promoter-TSS (NM_178020) -490 NM_178020 109685 Mm.447916 NM_178020 ENSMUSG00000036091 Hyal3 Hyl3 hyaluronoglucosaminidase 3 protein-coding common_peak1_91_609_0.139019994015975_9.32217542945824_0.974101943872242 chr5 107949946 107951605 + 0.974101943872242 NA intron (NM_026062, intron 1 of 4) intron (NM_026062, intron 1 of 4) 36302 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak2_118_847_0.119151915676445_9.78749641240142_0.97379341395801 chr15 64040088 64043000 + 0.97379341395801 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 18904 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_42_306_-0.216367675116228_8.15391100781206_0.973652987811982 chr19 3083421 3084676 + 0.973652987811982 NA Intergenic MMVL30-int|LTR|ERV1 113655 NR_045304 70011 Mm.393871 NR_045304 ENSMUSG00000100969 1700030N03Rik 1700087C08Rik RIKEN cDNA 1700030N03 gene ncRNA unique_peak2_42_306_-0.216367675116228_8.15391100781206_0.973652987811982 chr8 25088418 25090263 + 0.973652987811982 NA intron (NM_031257, intron 1 of 11) intron (NM_031257, intron 1 of 11) 12471 NM_031257 83436 Mm.261122 NM_031257 ENSMUSG00000031557 Plekha2 6430512N22Rik|AI851530|AU041791|TAPP2|W91773 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein-coding common_peak2_103_713_0.128865602984545_9.54421306552137_0.973343126009954 chr15 10469530 10471211 + 0.973343126009954 NA 5' UTR (NM_030046, exon 1 of 12) 5' UTR (NM_030046, exon 1 of 12) 146 NM_030046 78244 Mm.297862 NM_030046 ENSMUSG00000044224 Dnajc21 4930461P20Rik|9930116P15Rik DnaJ heat shock protein family (Hsp40) member C21 protein-coding common_peak1_55_319_0.19124896631692_8.41755257804582_0.973296875121722 chr8 121828833 121830107 + 0.973296875121722 NA promoter-TSS (NM_145605) promoter-TSS (NM_145605) 99 NM_145605 234825 Mm.209329 NM_145605 ENSMUSG00000040263 Klhdc4 AA408426|AV352552|BC012312|G430025P05Rik kelch domain containing 4 protein-coding common_peak1_29_204_-0.270823666907743_7.54406826605157_0.973139940203173-2 chr16 18629116 18629736 + 0.973139940203173 NA intron (NM_213614, intron 2 of 11) intron (NM_213614, intron 2 of 11) 512 NM_213614 18951 Mm.20365 NM_213614 ENSMUSG00000072214 Sept5 Cdcrel-1|Cdcrel1|Pnutl1 septin 5 protein-coding unique_peak2_29_204_-0.270823666907743_7.54406826605157_0.973139940203173 chr1 55215049 55216273 + 0.973139940203173 NA intron (NM_028713, intron 1 of 8) intron (NM_028713, intron 1 of 8) 11121 NM_028713 74013 Mm.292050 NM_028713 ENSMUSG00000025978 Rftn2 2700010E02Rik|3222401M22Rik raftlin family member 2 protein-coding unique_peak2_29_204_-0.270823666907743_7.54406826605157_0.973139940203173-2 chr1 85654136 85655603 + 0.973139940203173 NA intron (NM_013673, intron 1 of 19) intron (NM_013673, intron 1 of 19) 4881 NM_001313714 20684 Mm.290906 NM_013673 ENSMUSG00000026222 Sp100 A430075G10Rik nuclear antigen Sp100 protein-coding common_peak1_29_204_-0.270823666907743_7.54406826605157_0.973139940203173-3 chr3 109027140 109027661 + 0.973139940203173 NA 5' UTR (NM_001163567, exon 1 of 11) 5' UTR (NM_001163567, exon 1 of 11) 207 NM_001163567 329739 Mm.69013 NM_001163567 ENSMUSG00000040339 Fam102b 1600010D10Rik|B430201A12Rik family with sequence similarity 102, member B protein-coding common_peak1_29_204_-0.270823666907743_7.54406826605157_0.973139940203173 chr1 58504401 58505032 + 0.973139940203173 NA intron (NM_008765, intron 1 of 17) CpG 393 NM_001271526 18393 Mm.3411 NM_008765 ENSMUSG00000026037 Orc2 AU041563|Orc2l origin recognition complex, subunit 2 protein-coding unique_peak2_12_82_-0.446230497892348_6.15192418240075_0.973121849231028 chr11 11525878 11526525 + 0.973121849231028 NA Intergenic MTEa|LTR|ERVL-MaLR 36935 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak2_153_1354_-0.100743284281812_10.3537054941003_0.973008322708727 chr10 8504463 8507278 + 0.973008322708727 NA intron (NM_177387, intron 1 of 7) intron (NM_177387, intron 1 of 7) 12955 NM_177387 338362 Mm.41163 NM_177387 ENSMUSG00000047712 Ust D930010O20Rik|UA2OST uronyl-2-sulfotransferase protein-coding common_peak2_71_554_-0.158433976992089_9.03712697274142_0.972635752841694-2 chr8 22813218 22815033 + 0.972635752841694 NA Intergenic Intergenic -8471 NM_001122820 64933 Mm.390023 NM_029505 ENSMUSG00000031539 Ap3m2 5830445E16Rik|AP-3B adaptor-related protein complex 3, mu 2 subunit protein-coding common_peak2_71_554_-0.158433976992089_9.03712697274142_0.972635752841694-3 chrX 74312195 74313940 + 0.972635752841694 NA promoter-TSS (NM_138607) promoter-TSS (NM_138607) 34 NM_138607 108160 Mm.4370 NM_138607 ENSMUSG00000001962 Fam50a D0HXS9928E|XAP-5 family with sequence similarity 50, member A protein-coding common_peak2_71_554_-0.158433976992089_9.03712697274142_0.972635752841694 chr1 163994297 163995566 + 0.972635752841694 NA promoter-TSS (NM_201364) promoter-TSS (NM_201364) -14 NM_027279 69962 Mm.27284 NM_027279 ENSMUSG00000041396 Mettl18 2810422O20Rik|C78571 methyltransferase like 18 protein-coding common_peak2_354_3374_0.0605933458997825_11.7509684597754_0.972491650278153 chr15 60184435 60188620 + 0.972491650278153 NA Intergenic Intergenic -169909 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_44_239_0.219288041956113_8.01653461658658_0.972423241514226-2 chr4 59294602 59295973 + 0.972423241514226 NA Intergenic Intergenic 35236 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_44_239_0.219288041956113_8.01653461658658_0.972423241514226-3 chr8 123061384 123062599 + 0.972423241514226 NA Intergenic MYSERV6-int|LTR|ERVK -3517 NM_153176 234847 Mm.292075 NM_153176 ENSMUSG00000000738 Spg7 AI452278|AU015315|Cmar|PGN spastic paraplegia 7 homolog (human) protein-coding common_peak2_44_239_0.219288041956113_8.01653461658658_0.972423241514226 chr1 193272327 193273858 + 0.972423241514226 NA promoter-TSS (NM_008059) promoter-TSS (NM_008059) 96 NM_008059 14373 Mm.439721 NM_008059 ENSMUSG00000009633 G0s2 AI255151|AV006465 G0/G1 switch gene 2 protein-coding common_peak2_57_334_0.18725834035379_8.48164645552203_0.972392655111346 chr2 128686680 128687848 + 0.972392655111346 NA 5' UTR (NM_008569, exon 1 of 48) 5' UTR (NM_008569, exon 1 of 48) 131 NM_008569 17222 Mm.277408 NM_008569 ENSMUSG00000014355 Anapc1 2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24 anaphase promoting complex subunit 1 protein-coding common_peak2_51_381_-0.19539527220846_8.47973119193152_0.972392655111247 chr13 51202602 51203249 + 0.972392655111247 NA non-coding (NR_132443, exon 1 of 1) non-coding (NR_132443, exon 1 of 1) 141 NR_132443 667728 NR_132443 Hist1h2al EG667728 histone cluster 1, H2al pseudo common_peak1_11_75_-0.460764356537846_6.01754533517466_0.97183630865368 chr4 102605888 102606245 + 0.97183630865368 NA 3' UTR (NM_001177981, exon 10 of 10) 3' UTR (NM_001177981, exon 10 of 10) 16223 NM_001177981 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak2_440_4763_-0.0528124286468614_12.1915514835407_0.971818861252715 chr6 48696063 48710399 + 0.971818861252715 NA intron (NM_153175, intron 2 of 2) intron (NM_153175, intron 2 of 2) 5013 NM_153175 231931 Mm.321047 NM_153175 ENSMUSG00000047867 Gimap6 4833419H03Rik|Ian6|mFLJ00102 GTPase, IMAP family member 6 protein-coding common_peak1_63_380_0.175830698004559_8.6615625364956_0.971663805392735 chr18 67440011 67441069 + 0.971663805392735 NA exon (NM_027130, exon 4 of 17) exon (NM_027130, exon 4 of 17) 8596 NM_027130 69597 Mm.426052 NM_027130 ENSMUSG00000024527 Afg3l2 2310036I02Rik|AW260507|Emv66|par AFG3-like AAA ATPase 2 protein-coding common_peak1_411_4065_0.0553780063047196_12.0170835029971_0.971634886230762 chr13 46735103 46737142 + 0.971634886230762 NA Intergenic Intergenic -8273 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak1_65_396_0.170937061704279_8.7184637279951_0.971427398220784 chr10 67716665 67717602 + 0.971427398220784 NA Intergenic Intergenic -168178 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak1_108_900_-0.123641060283902_9.75356276567159_0.971280423706748 chrX 94724137 94725759 + 0.971280423706748 NA exon (NM_001081473, exon 1 of 1) exon (NM_001081473, exon 1 of 1) 379 NM_001081473 668166 Mm.426145 NM_001081473 ENSMUSG00000073062 Zxdb Zxda zinc finger, X-linked, duplicated B protein-coding common_peak1_331_3385_-0.06263576635458_11.6940483747184_0.971135411814684 chr12 51690650 51692598 + 0.971135411814684 NA exon (NM_001172098, exon 1 of 16) exon (NM_001172098, exon 1 of 16) 290 NM_001172098 94186 Mm.65979 NM_052973 ENSMUSG00000020954 Strn3 Gs2na|SG2NA striatin, calmodulin binding protein 3 protein-coding common_peak2_205_1701_0.0851448732771338_10.7755877583245_0.971026892023618 chr2 52741327 52743074 + 0.971026892023618 NA promoter-TSS (NM_019667) promoter-TSS (NM_019667) -51 NM_019667 56324 Mm.263639 NM_019667 ENSMUSG00000055371 Stam2 1200004O12Rik|5730456G07Rik|BB145015|Hbp signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 protein-coding common_peak1_55_414_-0.183790465030006_8.60507229371929_0.970753841643018 chr5 143526595 143527329 + 0.970753841643018 NA intron (NM_009007, intron 1 of 5) intron (NM_009007, intron 1 of 5) 1031 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e RAS-related C3 botulinum substrate 1 protein-coding common_peak1_59_350_0.179941523479499_8.54529798204431_0.970349757628833 chr4 152096210 152097334 + 0.970349757628833 NA promoter-TSS (NM_001285999) promoter-TSS (NM_001285999) 53 NM_001285999 269608 Mm.332102 NM_001004156 ENSMUSG00000039713 Plekhg5 BC023181|Syx pleckstrin homology domain containing, family G (with RhoGef domain) member 5 protein-coding common_peak1_328_3067_0.0635844291885537_11.6148749820972_0.969903778513783 chr4 6443418 6446442 + 0.969903778513783 NA intron (NM_010945, intron 1 of 30) intron (NM_010945, intron 1 of 30) 9341 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding common_peak1_22_97_0.323750959978302_6.77658532410436_0.969826191726145-2 chr7 28180047 28180429 + 0.969826191726145 NA promoter-TSS (NM_001271370) promoter-TSS (NM_001271370) -78 NM_001271370 13549 Mm.57249 NM_010092 ENSMUSG00000002409 Dyrk1b Mirk dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b protein-coding unique_peak2_18_123_-0.353832106989985_6.77728025689188_0.969826191726145 chr13 117009194 117009900 + 0.969826191726145 NA intron (NM_001081009, intron 3 of 26) intron (NM_001081009, intron 3 of 26) 15969 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding common_peak1_22_97_0.323750959978302_6.77658532410436_0.969826191726145 chr5 139208546 139208997 + 0.969826191726145 NA intron (NM_024451, intron 1 of 22) B1_Mus1|SINE|Alu -6387 NM_001256118 77053 Mm.210845 NM_024451 ENSMUSG00000036817 Sun1 4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810 Sad1 and UNC84 domain containing 1 protein-coding common_peak2_44_322_-0.209211717129293_8.23078449612928_0.969663115461433 chr18 33794192 33795655 + 0.969663115461433 NA promoter-TSS (NR_038152) promoter-TSS (NR_038152) 31 NR_038151 69749 Mm.248787 NR_038151 ENSMUSG00000087590 Epb41l4aos 2410004N09Rik|Epb4.1l4aos erythrocyte membrane protein band 4.1 like 4a, opposite strand ncRNA common_peak2_34_171_0.255180959821436_7.55385523461282_0.96955506600839 chr7 73530904 73531971 + 0.96955506600839 NA intron (NM_001081345, intron 2 of 38) B3|SINE|B2 10309 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak1_328_3348_-0.0628474640152294_11.6780909286991_0.969156269137963 chr4 83327580 83330192 + 0.969156269137963 NA Intergenic B4|SINE|B4 -4697 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak2_196_1608_0.0871580059018537_10.6955276136744_0.968941187897115 chr2 92458554 92461231 + 0.968941187897115 NA promoter-TSS (NM_211358) promoter-TSS (NM_211358) -98 NM_211358 228368 Mm.273990 NM_145832 ENSMUSG00000049922 Slc35c1 E430007K15Rik|fuct1 solute carrier family 35, member C1 protein-coding common_peak1_61_466_-0.173984223788999_8.78028662781516_0.968653089411308 chr7 64872325 64873177 + 0.968653089411308 NA exon (NM_023239, exon 1 of 1) exon (NM_023239, exon 1 of 1) 289 NM_023239 66647 Mm.19944 NM_023239 ENSMUSG00000070520 Ndnl2 5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|Nsmce3|mage-g1 necdin-like 2 protein-coding common_peak2_621_7212_-0.0426720061543051_12.7950477053976_0.968321617216029 chr17 25218821 25228995 + 0.968321617216029 NA intron (NM_028789, intron 1 of 4) intron (NM_028789, intron 1 of 4) 1326 NM_028789 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding common_peak2_59_449_-0.178512447432977_8.72452496750055_0.968257568766778 chr7 141901548 141902958 + 0.968257568766778 NA intron (NM_023764, intron 1 of 5) CpG 153 NM_023764 54473 Mm.103551 NM_023764 ENSMUSG00000025139 Tollip 4930403G24Rik|4931428G15Rik toll interacting protein protein-coding common_peak2_106_880_-0.124027789564641_9.72098431413809_0.968111089571914 chr12 114378002 114380065 + 0.968111089571914 NA Intergenic CpG 90433 NR_106062 102465663 NR_106062 ENSMUSG00000105438 Mir7094-1 mmu-mir-7094-1 microRNA 7094-1 ncRNA unique_peak2_9_62_-0.512758007055497_5.72090091997217_0.967990332264347 chr12 102439114 102439733 + 0.967990332264347 NA intron (NM_011175, intron 1 of 13) intron (NM_011175, intron 1 of 13) 274 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding unique_peak2_9_62_-0.512758007055497_5.72090091997217_0.967990332264347-2 chr17 72939726 72940231 + 0.967990332264347 NA 3' UTR (NM_029999, exon 3 of 3) 3' UTR (NM_029999, exon 3 of 3) 21673 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_124_1057_-0.113003133099323_9.99062234556436_0.967151140968846 chr16 78545363 78548511 + 0.967151140968846 NA intron (NM_025967, intron 3 of 4) intron (NM_025967, intron 3 of 4) -13379 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA unique_peak1_10_34_0.50390241456263_5.38123422422628_0.966872998477971 chr13 112425045 112425408 + 0.966872998477971 NA Intergenic Intergenic -38844 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding unique_peak2_7_50_-0.602784390032683_5.37103314695515_0.966872998477965 chr2 179177194 179177424 + 0.966872998477965 NA Intergenic Intergenic -237627 NM_026596 68175 Mm.158187 NM_026596 4930591A17Rik - RIKEN cDNA 4930591A17 gene protein-coding common_peak1_39_205_0.231246011633914_7.80212353300018_0.966835301181925 chr18 11645327 11646109 + 0.966835301181925 NA intron (NR_045527, intron 1 of 17) MMVL30-int|LTR|ERV1 -11631 NR_045526 225182 Mm.154275 NM_175458 ENSMUSG00000041238 Rbbp8 9930104E21Rik|CtIP|RBBP-8|RIM|SAE2 retinoblastoma binding protein 8 protein-coding common_peak1_46_254_0.20877765056716_8.09874226214244_0.966539247111633 chr11 17004306 17005052 + 0.966539247111633 NA intron (NM_019549, intron 1 of 9) intron (NM_019549, intron 1 of 9) 4039 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding common_peak2_76_484_0.154880603698576_8.99928123892378_0.966375296712061 chr11 106713699 106716057 + 0.966375296712061 NA intron (NM_001305158, intron 2 of 14) intron (NM_001305158, intron 2 of 14) 403 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding unique_peak2_22_152_-0.318927038599142_7.09792432339308_0.966342074587871 chr11 48926333 48927669 + 0.966342074587871 NA 5' UTR (NM_001045540, exon 1 of 3) 5' UTR (NM_001045540, exon 1 of 3) 181 NM_001045540 620913 Mm.452174 NM_001045540 ENSMUSG00000048852 Gm12185 Irgb2b1|OTTMUSG00000005523 predicted gene 12185 protein-coding unique_peak2_22_152_-0.318927038599142_7.09792432339308_0.966342074587871-2 chr9 37551977 37553282 + 0.966342074587871 NA 5' UTR (NM_022029, exon 1 of 4) 5' UTR (NM_022029, exon 1 of 4) 116 NM_022029 64011 Mm.335065 NM_022029 ENSMUSG00000053310 Nrgn 0710001B06Rik|AI838505|NG|NG/RC3|Pss1|R75334|RC3 neurogranin protein-coding common_peak1_22_152_-0.318927038599142_7.09792432339308_0.966342074587871-3 chr2 166627085 166627541 + 0.966342074587871 NA intron (NM_177782, intron 5 of 39) B4A|SINE|B4 -45405 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_22_152_-0.318927038599142_7.09792432339308_0.966342074587871-2 chr17 7930995 7931502 + 0.966342074587871 NA intron (NM_145968, intron 7 of 9) intron (NM_145968, intron 7 of 9) 5248 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding common_peak1_22_152_-0.318927038599142_7.09792432339308_0.966342074587871 chr12 111164180 111164647 + 0.966342074587871 NA intron (NR_130987, intron 2 of 3) intron (NR_130987, intron 2 of 3) -1957 NM_001286122 22031 Mm.27431 NM_011632 ENSMUSG00000021277 Traf3 AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn TNF receptor-associated factor 3 protein-coding common_peak2_119_857_0.117047217470871_9.80335744623498_0.966263770374801 chr4 139597694 139599878 + 0.966263770374801 NA intron (NM_001205173, intron 1 of 8) MLTR14|LTR|ERV1 24066 NM_001205173 212632 Mm.30464 NM_183148 ENSMUSG00000041025 Iffo2 C79267 intermediate filament family orphan 2 protein-coding common_peak1_135_1005_0.108958604727714_10.0288938921694_0.966140956806245 chr10 77581123 77582581 + 0.966140956806245 NA promoter-TSS (NM_145925) promoter-TSS (NM_145925) 85 NM_145925 108705 Mm.28853 NM_145925 ENSMUSG00000009291 Pttg1ip 1810010L20Rik|AI314311|AU018448|C79540 pituitary tumor-transforming 1 interacting protein protein-coding common_peak1_85_558_0.145635008597115_9.19952197714175_0.966055142182488 chr5 122314903 122316164 + 0.966055142182488 NA intron (NM_177242, intron 3 of 5) intron (NM_177242, intron 3 of 5) 31135 NM_177242 320717 Mm.489670 NM_177242 ENSMUSG00000038582 Pptc7 9130017A15Rik|AA672638|AI848390|TA-PP2C PTC7 protein phosphatase homolog protein-coding common_peak1_203_1681_0.0849334092450249_10.7584286948777_0.965980780440268 chr10 7472306 7474665 + 0.965980780440268 NA promoter-TSS (NM_029975) promoter-TSS (NM_029975) -8 NM_029975 77777 Mm.442442 NM_029975 ENSMUSG00000079685 Ulbp1 A430108B07Rik|MULT1 UL16 binding protein 1 protein-coding common_peak1_114_811_0.121230473786653_9.7259511540785_0.965746919687681 chr1 170174050 170175019 + 0.965746919687681 NA intron (NM_001305046, intron 1 of 9) intron (NM_001305046, intron 1 of 9) 430 NM_001305046 107652 Mm.27969 NM_133806 ENSMUSG00000026670 Uap1 AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding common_peak1_146_1281_-0.103169793554773_10.2725956498414_0.965242565992014 chr13 65278057 65279564 + 0.965242565992014 NA promoter-TSS (NM_178364) promoter-TSS (NM_178364) -44 NM_178364 170936 Mm.151546 NM_178364 ENSMUSG00000021514 Zfp369 B930030B22Rik|D230020H11Rik|NRIF2 zinc finger protein 369 protein-coding common_peak1_85_681_-0.141288447583868_9.34298370523224_0.964767936806754 chr3 87906255 87907429 + 0.964767936806754 NA intron (NM_008231, intron 1 of 5) CpG 521 NM_008231 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding common_peak2_39_282_-0.22691170401475_8.03120239082451_0.964720457441636-2 chr8 72420664 72421611 + 0.964720457441636 NA intron (NM_001122832, intron 1 of 15) CpG 337 NM_001122832 13859 Mm.288894 NM_007944 ENSMUSG00000006276 Eps15l1 9830147J04Rik|AI593686|Eps15-rs|Eps15R epidermal growth factor receptor pathway substrate 15-like 1 protein-coding common_peak1_39_282_-0.22691170401475_8.03120239082451_0.964720457441636 chr2 156392368 156393069 + 0.964720457441636 NA non-coding (NR_024329, exon 1 of 1) non-coding (NR_024329, exon 1 of 1) 261 NR_024329 347740 Mm.324242 NR_024329 2900097C17Rik 1810005K14Rik|4930563C06Rik RIKEN cDNA 2900097C17 gene ncRNA common_peak2_39_282_-0.22691170401475_8.03120239082451_0.964720457441636 chr6 114929357 114930341 + 0.964720457441636 NA Intergenic Intergenic -8097 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak2_48_268_0.205413874354061_8.17416929973365_0.964326770719175 chr10 40309549 40310940 + 0.964326770719175 NA Intergenic ORR1B1|LTR|ERVL-MaLR -8056 NM_009665 11702 Mm.253533 NM_009665 ENSMUSG00000075232 Amd1 AdoMetDC|Amd-1|SAMDC|SAMDC 1|adoMetDC1 S-adenosylmethionine decarboxylase 1 protein-coding common_peak2_104_861_-0.12596382841228_9.68856214488296_0.9642504010694 chr13 59584197 59586195 + 0.9642504010694 NA promoter-TSS (NR_045633) promoter-TSS (NR_045633) 27 NR_045633 319469 Mm.437992 NR_045633 ENSMUSG00000021557 A230056J06Rik - RIKEN cDNA A230056J06 gene ncRNA common_peak1_104_861_-0.12596382841228_9.68856214488296_0.9642504010694 chr3 54806857 54808250 + 0.9642504010694 NA exon (NM_133231, exon 1 of 3) exon (NM_133231, exon 1 of 3) 238 NM_133231 170767 Mm.185735 NM_133231 ENSMUSG00000036615 Rfxap 5730495K23Rik regulatory factor X-associated protein protein-coding common_peak1_315_2917_0.0645595455681374_11.543043940702_0.964096828893777 chr13 49307829 49310028 + 0.964096828893777 NA intron (NM_015759, intron 1 of 17) intron (NM_015759, intron 1 of 17) 280 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_31_152_0.265477731618872_7.39012670850209_0.963816137134242 chr4 144997433 144998580 + 0.963816137134242 NA intron (NM_001276465, intron 67 of 69) intron (NM_001276465, intron 67 of 69) 104869 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak2_155_1197_0.0997558791917879_10.2762901323847_0.963635588083917 chr15 58214165 58216266 + 0.963635588083917 NA promoter-TSS (NM_026346) promoter-TSS (NM_026346) -323 NM_026346 67731 Mm.25683 NM_026346 ENSMUSG00000022358 Fbxo32 4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx F-box protein 32 protein-coding common_peak1_158_1226_0.0989567479334923_10.3103979076297_0.96320511517392 chr4 108847438 108848959 + 0.96320511517392 NA exon (NM_029571, exon 1 of 1) exon (NM_029571, exon 1 of 1) 341 NM_029571 100087 Mm.440007 NM_029571 ENSMUSG00000073775 Kti12 1110001A12Rik|AI326810|AU014758 KTI12 homolog, chromatin associated protein-coding common_peak1_74_581_-0.154725634618616_9.10751252559897_0.963004378995083 chr10 26373590 26374788 + 0.963004378995083 NA intron (NM_172787, intron 1 of 21) CpG 996 NM_172787 237339 Mm.338439 NM_172787 ENSMUSG00000039089 L3mbtl3 AI481284|MBT-1 l(3)mbt-like 3 (Drosophila) protein-coding common_peak2_48_355_-0.198857194055714_8.37630483393854_0.962773408829981 chr4 119194717 119196081 + 0.962773408829981 NA promoter-TSS (NM_001038998) promoter-TSS (NM_001038998) 89 NM_024462 69216 Mm.36697 NM_024462 ENSMUSG00000028643 Svbp 2410005K17Rik|AI851162|Ccdc23 small vasohibin binding protein protein-coding common_peak1_97_661_0.132801141289823_9.43708797745213_0.962733821236113 chr15 97246953 97248395 + 0.962733821236113 NA promoter-TSS (NM_178114) promoter-TSS (NM_178114) -387 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak2_207_1723_0.0837141191109012_10.7934011186445_0.962720313253693 chr10 21904606 21909245 + 0.962720313253693 NA intron (NM_001161845, intron 1 of 13) intron (NM_001161845, intron 1 of 13) 24741 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_83_542_0.145890878366849_9.15775382698779_0.96264467523974 chr1 131637870 131639341 + 0.96264467523974 NA intron (NM_007799, intron 1 of 9) intron (NM_007799, intron 1 of 9) 291 NM_007799 13034 Mm.230249 NM_007799 ENSMUSG00000004552 Ctse A430072O03Rik|C920004C08Rik|CE|CatE cathepsin E protein-coding common_peak2_83_542_0.145890878366849_9.15775382698779_0.96264467523974 chr10 75503936 75505868 + 0.96264467523974 NA Intergenic HERVL40-int|LTR|ERVL 12420 NM_175133 68778 Mm.29382 NM_175133 ENSMUSG00000033416 Gucd1 1110038D17Rik guanylyl cyclase domain containing 1 protein-coding unique_peak2_10_69_-0.49609758543737_5.88123422422628_0.962598551638142 chr3 89087707 89088306 + 0.962598551638142 NA exon (NM_028188, exon 9 of 11) exon (NM_028188, exon 9 of 11) 2025 NM_001083808 72296 Mm.27687 NM_028188 ENSMUSG00000041263 Rusc1 2210403N08Rik|AA408288|NESCA RUN and SH3 domain containing 1 protein-coding unique_peak2_28_133_0.282574124054796_7.20737625248517_0.962410005224161 chr10 80617875 80618922 + 0.962410005224161 NA Intergenic Intergenic -4382 NM_134002 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding common_peak1_28_133_0.282574124054796_7.20737625248517_0.962410005224161 chr13 20094223 20094823 + 0.962410005224161 NA intron (NM_080288, intron 1 of 21) intron (NM_080288, intron 1 of 21) 4016 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding common_peak2_297_2710_0.0669279154562652_11.4380733555658_0.962313603137182 chr11 83063779 83068750 + 0.962313603137182 NA intron (NM_011408, intron 1 of 1) intron (NM_011408, intron 1 of 1) 1152 NM_011408 20556 Mm.278689 NM_011408 ENSMUSG00000072620 Slfn2 Shlf2 schlafen 2 protein-coding unique_peak2_25_115_0.29744024951336_7.00670111988425_0.962189736626927 chr19 40488446 40489521 + 0.962189736626927 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) 24753 NM_178362 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_25_115_0.29744024951336_7.00670111988425_0.962189736626927 chr17 83695299 83695760 + 0.962189736626927 NA Intergenic Intergenic -10634 NM_001171054 116871 Mm.277668 NM_054082 ENSMUSG00000055817 Mta3 1110002J22Rik|mKIAA1266 metastasis associated 3 protein-coding common_peak2_31_219_-0.258494139213136_7.65211264391809_0.961925237122111 chr6 114898351 114899835 + 0.961925237122111 NA intron (NM_177683, intron 1 of 4) intron (NM_177683, intron 1 of 4) 22659 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_31_219_-0.258494139213136_7.65211264391809_0.961925237122111 chr3 148762420 148763244 + 0.961925237122111 NA Intergenic Intergenic 191803 NM_001081298 99633 Mm.9776 NM_001081298 ENSMUSG00000028184 Adgrl2 AI450192|CIRL-2|Gm619|Lec1|Lphh1|Lphn2|mKIAA0786 adhesion G protein-coupled receptor L2 protein-coding unique_peak2_31_219_-0.258494139213136_7.65211264391809_0.961925237122111 chr6 37705219 37706700 + 0.961925237122111 NA Intergenic Intergenic -164852 NM_001272064 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak2_204_1692_0.0841825940481051_10.7674575549197_0.961784282657223 chr15 41788098 41791301 + 0.961784282657223 NA intron (NM_001130163, intron 1 of 13) intron (NM_001130163, intron 1 of 13) 184 NM_130885 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_90_601_0.138725365960346_9.30298235973988_0.961670052739995 chr5 122241760 122243799 + 0.961670052739995 NA TTS (NM_001042489) TTS (NM_001042489) 21681 NR_104441 654470 Mm.28804 NM_001039153 ENSMUSG00000038593 Tctn1 G730031O11Rik|Tect1 tectonic family member 1 protein-coding common_peak2_83_663_-0.144340165175715_9.30286934875907_0.961670052739797-2 chr9 44567130 44569010 + 0.961670052739797 NA Intergenic Intergenic -36822 NM_001110826 13209 Mm.267061 NM_007841 ENSMUSG00000032097 Ddx6 1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 protein-coding common_peak2_83_663_-0.144340165175715_9.30286934875907_0.961670052739797 chr5 64860892 64862997 + 0.961670052739797 NA Intergenic Intergenic 58421 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_176_1596_-0.0914876762161239_10.5954047593032_0.96127975349195 chr16 38522040 38523789 + 0.96127975349195 NA promoter-TSS (NM_024273) promoter-TSS (NM_024273) -251 NM_024273 76916 Mm.132231 NM_024273 ENSMUSG00000002846 Timmdc1 2810021C21Rik|4930455C21Rik|AV135763 translocase of inner mitochondrial membrane domain containing 1 protein-coding common_peak2_144_1260_-0.10358365893733_10.2485607308596_0.960995206028868 chr5 143314202 143315851 + 0.960995206028868 NA exon (NM_172726, exon 1 of 6) exon (NM_172726, exon 1 of 6) 334 NM_172726 231868 Mm.440105 NM_172726 ENSMUSG00000039244 E130309D02Rik A630028N22 RIKEN cDNA E130309D02 gene protein-coding common_peak1_265_2349_0.0720675823963539_11.2344788326505_0.960832216835021 chr13 45442797 45445379 + 0.960832216835021 NA Intergenic Intergenic 54346 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak1_70_436_0.161670076346418_8.85232450767381_0.960814633795383 chr7 115615454 115616481 + 0.960814633795383 NA intron (NM_001277327, intron 6 of 14) intron (NM_001277327, intron 6 of 14) 185642 NM_001277328 20679 Mm.323365 NM_011445 ENSMUSG00000051910 Sox6 AI987981|SOX-LZ SRY (sex determining region Y)-box 6 protein-coding unique_peak2_28_196_-0.273388504943808_7.48535756698447_0.960660903131204-2 chr6 130095116 130096694 + 0.960660903131204 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -28634 NM_001252577 16635 Mm.333431 NM_010649 ENSMUSG00000079852 Klra4 Chok|Klra32|Klra33|Ly-49d|Ly49d|ly49r<129> killer cell lectin-like receptor, subfamily A, member 4 protein-coding unique_peak2_28_196_-0.273388504943808_7.48535756698447_0.960660903131204 chr6 124910441 124912353 + 0.960660903131204 NA 5' UTR (NM_008479, exon 1 of 8) 5' UTR (NM_008479, exon 1 of 8) 308 NM_008479 16768 Mm.4528 NM_008479 ENSMUSG00000030124 Lag3 CD223|LAG-3|Ly66 lymphocyte-activation gene 3 protein-coding unique_peak2_52_297_0.19657324498095_8.31745514295264_0.960482888836281 chr4 59213716 59215600 + 0.960482888836281 NA intron (NM_011673, intron 5 of 8) intron (NM_011673, intron 5 of 8) 25108 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak2_41_219_0.222727241460195_7.89272333425476_0.960472282892978 chr2 142900762 142902203 + 0.960472282892978 NA promoter-TSS (NM_001081133) promoter-TSS (NM_001081133) -18 NM_001081133 16558 Mm.251934 NM_001081133 ENSMUSG00000038844 Kif16b 8430434E15Rik|AA623607|AI789011|C80253|C80902|mKIAA1590 kinesin family member 16B protein-coding common_peak1_41_219_0.222727241460195_7.89272333425476_0.960472282892978 chr11 69418096 69418803 + 0.960472282892978 NA Intergenic Intergenic -4774 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak1_25_174_-0.295789867191397_7.30331617823663_0.960375056795035 chr19 24224378 24224924 + 0.960375056795035 NA intron (NM_011597, intron 1 of 22) CpG 375 NM_011597 21873 Mm.104744 NM_011597 ENSMUSG00000024812 Tjp2 ZO-2 tight junction protein 2 protein-coding common_peak1_17_69_0.375402344927701_6.31698418940882_0.959986039043193-3 chr7 120881776 120882233 + 0.959986039043193 NA intron (NM_001267711, intron 6 of 17) intron (NM_001267711, intron 6 of 17) 30815 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak1_17_69_0.375402344927701_6.31698418940882_0.959986039043193-2 chr2 4580227 4580603 + 0.959986039043193 NA intron (NM_001177843, intron 14 of 23) intron (NM_001177843, intron 14 of 23) 20661 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294 FERM domain containing 4A protein-coding common_peak1_17_69_0.375402344927701_6.31698418940882_0.959986039043193 chr10 85411786 85412218 + 0.959986039043193 NA intron (NM_028709, intron 1 of 16) intron (NM_028709, intron 1 of 16) 25188 NM_028709 74007 Mm.36544 NM_028709 ENSMUSG00000020042 Btbd11 6330404E16Rik BTB (POZ) domain containing 11 protein-coding unique_peak2_17_69_0.375402344927701_6.31698418940882_0.959986039043193 chr7 80294399 80295073 + 0.959986039043193 NA intron (NM_001285997, intron 1 of 13) CpG 285 NM_001285998 233406 Mm.227274 NM_145150 ENSMUSG00000038943 Prc1 D7Ertd348e protein regulator of cytokinesis 1 protein-coding common_peak2_70_545_-0.159597595072835_9.01295834338343_0.959934288747779 chr2 180582160 180583256 + 0.959934288747779 NA 5' UTR (NM_028479, exon 2 of 6) 5' UTR (NM_028479, exon 2 of 6) 1404 NM_028479 73247 Mm.426558 NM_028479 ENSMUSG00000027569 Mrgbp 1600027N09Rik|AW060503|C80444 MRG/MORF4L binding protein protein-coding common_peak1_50_372_-0.195361043127781_8.44535129869135_0.959793236370345 chr3 96277708 96278552 + 0.959793236370345 NA Intergenic CpG 8430 NM_175666 319189 Mm.297655 NM_175666 ENSMUSG00000105827 Hist2h2bb H2b-616 histone cluster 2, H2bb protein-coding common_peak2_41_298_-0.21991471921325_8.11404431459148_0.959331346955102 chr11 108282552 108284101 + 0.959331346955102 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 60562 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_68_527_-0.16179879911166_8.96349471980263_0.95889049852599 chr12 54713873 54714634 + 0.95889049852599 NA Intergenic U1|snRNA|snRNA -18388 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak1_54_312_0.191272171453297_8.38565493265927_0.958810794000742 chr5 109751406 109752169 + 0.958810794000742 NA Intergenic Intergenic 82355 NR_027964 667213 Mm.454429 NR_027964 ENSMUSG00000105044 Gm10416 EG667213|ENSMUSG00000072761 zinc finger protein pseudogene pseudo common_peak1_36_185_0.240624840103379_7.65947123115972_0.95865337307853 chr2 118303055 118303937 + 0.95865337307853 NA intron (NM_201367, intron 1 of 2) intron (NM_201367, intron 1 of 2) -1418 NR_045919 73358 Mm.437192 NR_045919 ENSMUSG00000085889 1700054M17Rik - RIKEN cDNA 1700054M17 gene ncRNA common_peak1_36_185_0.240624840103379_7.65947123115972_0.95865337307853-3 chr7 31208326 31208748 + 0.95865337307853 NA Intergenic CpG 46179 NR_046062 100038516 Mm.387223 NR_046062 ENSMUSG00000100985 Gm10640 EG668322|ENSMUSG00000074193 predicted gene 10640 ncRNA common_peak1_36_185_0.240624840103379_7.65947123115972_0.95865337307853-2 chr7 27545252 27545917 + 0.95865337307853 NA intron (NM_011116, intron 1 of 13) B1_Mus1|SINE|Alu 7528 NM_011116 18807 Mm.6483 NM_011116 ENSMUSG00000003363 Pld3 Sam-9 phospholipase D family, member 3 protein-coding common_peak1_139_1043_0.106764340326361_10.0812881667331_0.958637284276824 chr10 95940055 95941539 + 0.958637284276824 NA 5' UTR (NM_001001932, exon 1 of 29) 5' UTR (NM_001001932, exon 1 of 29) 134 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding common_peak2_368_3543_0.058549408816976_11.8204375929635_0.958581147726795 chr4 134922167 134926526 + 0.958581147726795 NA exon (NM_023665, exon 2 of 5) exon (NM_023665, exon 2 of 5) 721 NM_023665 27981 Mm.331964 NM_023665 ENSMUSG00000037266 Rsrp1 2700043I21Rik|D4Ucla2|D4Wsu53e arginine/serine rich protein 1 protein-coding common_peak1_21_91_0.336235786636938_6.69167984937548_0.958271040068181-2 chr11 118236443 118236858 + 0.958271040068181 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 11942 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak2_17_116_-0.365679357710738_6.68752504072804_0.958271040068181 chr1 40394998 40395757 + 0.958271040068181 NA Intergenic Intergenic -34193 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_21_91_0.336235786636938_6.69167984937548_0.958271040068181-3 chr6 31207271 31207857 + 0.958271040068181 NA intron (NR_110469, intron 1 of 3) intron (NR_110469, intron 1 of 3) 10910 NR_110470 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak1_21_91_0.336235786636938_6.69167984937548_0.958271040068181 chr1 97633204 97633694 + 0.958271040068181 NA Intergenic RMER5|LTR|ERV1 28569 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak1_17_116_-0.365679357710738_6.68752504072804_0.958271040068181 chr1 71100950 71101373 + 0.958271040068181 NA intron (NM_007525, intron 1 of 10) intron (NM_007525, intron 1 of 10) 1811 NM_007525 12021 Mm.10764 NM_007525 ENSMUSG00000026196 Bard1 ENSMUSG00000060893|ENSMUSG00000073653 BRCA1 associated RING domain 1 protein-coding unique_peak2_21_91_0.336235786636938_6.69167984937548_0.958271040068181 chr11 94520819 94521531 + 0.958271040068181 NA intron (NM_170671, intron 1 of 18) intron (NM_170671, intron 1 of 18) 327 NM_170671 104601 Mm.84725 NM_170671 ENSMUSG00000039110 Mycbpap 4932408B01Rik|AMAP-1|AW125474 MYCBP associated protein protein-coding common_peak2_17_116_-0.365679357710738_6.68752504072804_0.958271040068181 chr6 28928679 28929257 + 0.958271040068181 NA Intergenic IAPEz-int|LTR|ERVK -93651 NR_029567 387237 NR_029567 ENSMUSG00000065469 Mir129-1 Mirn129-1|Mirn129b|miR-129b|mir-129-1 microRNA 129-1 ncRNA common_peak2_66_509_-0.163809736709135_8.91244856850429_0.958221821809335 chr15 76537886 76539528 + 0.958221821809335 NA promoter-TSS (NM_013909) promoter-TSS (NM_013909) 39 NM_013909 30840 Mm.275279 NM_013909 ENSMUSG00000022559 Fbxl6 AU021795|Fbl6 F-box and leucine-rich repeat protein 6 protein-coding common_peak2_66_509_-0.163809736709135_8.91244856850429_0.958221821809335-2 chr7 141577891 141580274 + 0.958221821809335 NA intron (NM_007459, intron 1 of 21) intron (NM_007459, intron 1 of 21) 16902 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding common_peak1_139_1208_-0.104928192352878_10.1871344330727_0.958200851595028 chr14 60702326 60704731 + 0.958200851595028 NA intron (NM_001033272, intron 2 of 12) intron (NM_001033272, intron 2 of 12) -29376 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak1_56_327_0.186946714932089_8.45102536208413_0.957908335025201 chr10 81128092 81128976 + 0.957908335025201 NA Intergenic Intergenic -7737 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak1_36_258_-0.237024636475144_7.89829596944898_0.95770726185274 chr10 117840636 117841473 + 0.95770726185274 NA intron (NM_024457, intron 1 of 7) intron (NM_024457, intron 1 of 7) 4920 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak2_159_1415_-0.0966343888931522_10.4192883556364_0.957666455320194 chr10 128034678 128037536 + 0.957666455320194 NA intron (NM_013608, intron 1 of 7) CpG 761 NM_001113199 17938 Mm.3746 NM_013608 ENSMUSG00000061315 Naca AL022831|AL024382|Gm1878|mKIAA0363|skNAC nascent polypeptide-associated complex alpha polypeptide protein-coding common_peak1_218_2056_-0.07987253598602_10.9663898105319_0.957654822442877 chr18 67244811 67246175 + 0.957654822442877 NA 5' UTR (NM_172630, exon 1 of 11) 5' UTR (NM_172630, exon 1 of 11) 337 NM_172630 225651 Mm.235792 NM_172630 ENSMUSG00000062526 Mppe1 A530095G11 metallophosphoesterase 1 protein-coding common_peak1_79_509_0.15000541314463_9.06935614343117_0.957627525919758 chr16 57166633 57167422 + 0.957627525919758 NA intron (NM_023175, intron 1 of 9) CpG 305 NM_023175 52633 Mm.383203 NM_023175 ENSMUSG00000022751 Nit2 1190017B19Rik|D16Ertd502e nitrilase family, member 2 protein-coding common_peak1_183_1671_-0.0890613944283043_10.6628284348667_0.957394717089072 chr16 10771105 10773341 + 0.957394717089072 NA Intergenic Intergenic 13313 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding common_peak1_56_422_-0.180015133569777_8.63450628633506_0.957257837102028-2 chr7 110120969 110121863 + 0.957257837102028 NA promoter-TSS (NM_009516) promoter-TSS (NM_009516) -643 NM_009516 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding common_peak1_56_422_-0.180015133569777_8.63450628633506_0.957257837102028 chr1 105662867 105663749 + 0.957257837102028 NA promoter-TSS (NM_173187) promoter-TSS (NM_173187) 368 NM_013784 27392 Mm.268911 NM_013784 ENSMUSG00000056536 Pign Gm20308|PIG-N phosphatidylinositol glycan anchor biosynthesis, class N protein-coding common_peak2_56_422_-0.180015133569777_8.63450628633506_0.957257837102028 chr6 8484734 8486462 + 0.957257837102028 NA Intergenic Intergenic 23563 NR_040452 320312 Mm.374890 NR_040452 ENSMUSG00000087305 A430035B10Rik 2810488G03Rik RIKEN cDNA A430035B10 gene ncRNA common_peak2_131_968_0.110191714618511_9.97544871272434_0.957164194895769 chr11 30953422 30955215 + 0.957164194895769 NA promoter-TSS (NM_023906) promoter-TSS (NM_023906) -80 NM_023906 65257 Mm.440539 NM_023906 ENSMUSG00000020305 Asb3 2400011J03Rik|Asb-3 ankyrin repeat and SOCS box-containing 3 protein-coding common_peak1_79_626_-0.147962782798551_9.21834024140276_0.957121027593034 chr17 25239892 25241424 + 0.957121027593034 NA promoter-TSS (NM_172529) promoter-TSS (NM_172529) 488 NM_026676 68327 Mm.180687 NM_026676 ENSMUSG00000015126 Tsr3 0610007P22Rik|1110014B11Rik|AL022759 TSR3 20S rRNA accumulation protein-coding common_peak2_171_1355_0.093810329490319_10.4520466278815_0.957084464296193 chr8 107055681 107057566 + 0.957084464296193 NA promoter-TSS (NR_028367) promoter-TSS (NR_028367) 114 NM_139229 97484 Mm.288641 NM_139229 ENSMUSG00000031916 Cog8 BB235941|C87832 component of oligomeric golgi complex 8 protein-coding unique_peak2_21_144_-0.320111347320983_7.01985341635444_0.957084007924927 chr17 73804260 73805420 + 0.957084007924927 NA promoter-TSS (NM_020578) promoter-TSS (NM_020578) -1 NM_020578 57440 Mm.18526 NM_020578 ENSMUSG00000024065 Ehd3 Ehd2 EH-domain containing 3 protein-coding common_peak2_168_1510_-0.0934740966354184_10.5145508968471_0.956888914600064 chr9 114729709 114732612 + 0.956888914600064 NA promoter-TSS (NM_026036) promoter-TSS (NM_026036) -43 NM_026036 67213 Mm.28858 NM_026036 ENSMUSG00000032434 Cmtm6 2810051A14Rik|AA536733|Cklfsf6 CKLF-like MARVEL transmembrane domain containing 6 protein-coding common_peak1_110_919_-0.12157188357968_9.78470410915454_0.956841774860699 chrX 42502002 42503904 + 0.956841774860699 NA intron (NR_132588, intron 1 of 2) intron (NR_132588, intron 1 of 2) 388 NM_001313689 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak2_62_474_-0.170174543266528_8.80669643158505_0.956717712669805 chr8 117547628 117549780 + 0.956717712669805 NA intron (NM_172285, intron 2 of 32) intron (NM_172285, intron 2 of 32) 50413 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak1_373_3603_0.0581466894748424_11.844456640551_0.956531790221682 chr11 100934375 100938538 + 0.956531790221682 NA intron (NM_213659, intron 1 of 23) intron (NM_213659, intron 1 of 23) 3084 NM_213660 20848 Mm.249934 NM_011486 ENSMUSG00000004040 Stat3 1110034C02Rik|AW109958|Aprf signal transducer and activator of transcription 3 protein-coding common_peak2_242_2097_0.075677636568896_11.0726377808617_0.956177394889364 chr17 88439905 88443672 + 0.956177394889364 NA intron (NM_180974, intron 1 of 5) CpG 1076 NM_180974 14236 Mm.112824 NM_180974 ENSMUSG00000034998 Foxn2 3230402J05Rik|6030465J18Rik|Fkh19|Foxn1|HTLF forkhead box N2 protein-coding common_peak2_303_2779_0.0659442805314452_11.4738413078766_0.956117566503792 chr13 54691406 54695199 + 0.956117566503792 NA intron (NR_027395, intron 1 of 10) intron (NR_027395, intron 1 of 10) 658 NR_027395 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding unique_peak2_43_233_0.216045334296902_7.97838738673186_0.955703352414759 chrX 109113280 109114649 + 0.955703352414759 NA intron (NM_019989, intron 1 of 3) intron (NM_019989, intron 1 of 3) 18557 NM_019989 56726 Mm.260760 NM_019989 ENSMUSG00000031246 Sh3bgrl 1190008F14Rik SH3-binding domain glutamic acid-rich protein like protein-coding common_peak2_126_1077_-0.111930768578461_10.0181760784633_0.954303980317007 chr11 107392424 107395133 + 0.954303980317007 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 76942 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_98_803_-0.129597227364764_9.58625307749655_0.95409646672688 chr10 81292801 81293793 + 0.95409646672688 NA intron (NM_001293646, intron 1 of 18) CpG 334 NM_001146687 18717 Mm.24222 NM_008844 ENSMUSG00000034902 Pip5k1c AI115456|AI835305|Pip5kIgamma phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma protein-coding common_peak1_229_1957_0.078013652554489_10.9741718758809_0.954064028205648 chr5 117115015 117116307 + 0.954064028205648 NA intron (NM_178622, intron 1 of 11) CpG 332 NM_001122666 71954 Mm.34456 NM_178622 ENSMUSG00000066900 Suds3 2400003N08Rik|2410008L21Rik|AU067672|mSds3 suppressor of defective silencing 3 homolog (S. cerevisiae) protein-coding common_peak1_108_758_0.12378616011417_9.62984915547255_0.953499904400621 chr12 84284921 84285914 + 0.953499904400621 NA 5' UTR (NM_029880, exon 1 of 10) 5' UTR (NM_029880, exon 1 of 10) 121 NM_001252626 77219 Mm.246127 NM_029880 ENSMUSG00000072946 Ptgr2 1810016I24Rik|9130222H03Rik|9630002F03Rik|AI838763|B830026H24Rik|PGR-2|PRG-2|Zadh1 prostaglandin reductase 2 protein-coding common_peak1_184_1486_0.0897003060373116_10.5830390850711_0.953427541728384 chr18 63691582 63693246 + 0.953427541728384 NA promoter-TSS (NM_016792) promoter-TSS (NM_016792) -55 NM_016792 53382 Mm.19169 NM_016792 ENSMUSG00000024583 Txnl1 32kDa|TRP32|Txnl thioredoxin-like 1 protein-coding common_peak2_103_714_0.126846435347892_9.5452226493397_0.953271152305857 chr15 97246864 97248913 + 0.953271152305857 NA promoter-TSS (NM_178114) promoter-TSS (NM_178114) -601 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_38_198_0.236318829064212_7.75478403507575_0.953227804218378-2 chr6 122764234 122765081 + 0.953227804218378 NA Intergenic CpG -21912 NM_011401 20527 Mm.395108 NM_011401 ENSMUSG00000003153 Slc2a3 AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3 solute carrier family 2 (facilitated glucose transporter), member 3 protein-coding common_peak1_38_198_0.236318829064212_7.75478403507575_0.953227804218378 chr5 107645489 107646129 + 0.953227804218378 NA intron (NM_001289569, intron 11 of 12) MT2B1|LTR|ERVL -11959 NR_046195 78443 Mm.490703 NR_046195 ENSMUSG00000085900 A930041C12Rik - RIKEN cDNA A930041C12 gene ncRNA common_peak1_38_273_-0.225088633352667_7.98548776628419_0.953115691401012 chr6 37714198 37714880 + 0.953115691401012 NA Intergenic Intergenic -156272 NM_001272064 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak2_38_273_-0.225088633352667_7.98548776628419_0.953115691401012 chr7 14622577 14623624 + 0.953115691401012 NA promoter-TSS (NR_045120) promoter-TSS (NR_045120) -34 NR_045119 100417675 Mm.372763 NR_045119 ENSMUSG00000041596 Nlrp5-ps Gm18756 NLR family, pyrin domain containing 5, pseudogene pseudo common_peak2_140_1053_0.105606451942089_10.0944623776083_0.952620735305859 chr1 66862305 66864540 + 0.952620735305859 NA promoter-TSS (NM_007381) promoter-TSS (NM_007381) -113 NM_007381 11363 Mm.2445 NM_007381 ENSMUSG00000026003 Acadl AA960361|AU018452|C79855|LCAD acyl-Coenzyme A dehydrogenase, long-chain protein-coding common_peak2_129_1107_-0.110215334529936_10.0586344987842_0.952420830995282 chr9 103304471 103306041 + 0.952420830995282 NA promoter-TSS (NM_176979) promoter-TSS (NM_176979) -71 NM_176979 235559 Mm.259893 NM_176979 ENSMUSG00000032555 Topbp1 1110031N14Rik|2810429C13Rik|AI256758|D430026L04Rik|mKIAA0259 topoisomerase (DNA) II binding protein 1 protein-coding common_peak1_84_672_-0.142820846757825_9.3230522712314_0.952387001278529 chr17 80174476 80176084 + 0.952387001278529 NA intron (NM_176963, intron 4 of 6) intron (NM_176963, intron 4 of 6) 32025 NM_001195486 225027 Mm.292016 NM_146083 ENSMUSG00000024097 Srsf7 35kDa|9430065L19Rik|9G8|NX-96|Sfrs7 serine/arginine-rich splicing factor 7 protein-coding unique_peak2_45_330_-0.205614291527352_8.26788026104354_0.9522956341888 chr10 34196983 34198906 + 0.9522956341888 NA intron (NM_172508, intron 1 of 5) intron (NM_172508, intron 1 of 5) 9607 NM_172508 212898 Mm.34557 NM_172508 ENSMUSG00000039497 Dse 6030499O08|AI480506|B130024B19Rik|DS-epi1|Sart2 dermatan sulfate epimerase protein-coding common_peak1_45_330_-0.205614291527352_8.26788026104354_0.9522956341888 chr7 80780836 80781613 + 0.9522956341888 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 22107 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak2_45_330_-0.205614291527352_8.26788026104354_0.9522956341888 chr1 16664940 16666106 + 0.9522956341888 NA intron (NM_027415, intron 1 of 2) CpG 332 NM_026392 70397 Mm.194225 NM_026392 ENSMUSG00000025940 Tmem70 1110020A09Rik|2210416J16Rik transmembrane protein 70 protein-coding common_peak1_45_247_0.21087680489299_8.05963471283337_0.952268244773957 chr19 44253597 44254401 + 0.952268244773957 NA Intergenic Intergenic -39677 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_45_247_0.21087680489299_8.05963471283337_0.952268244773957 chr10 7589028 7589941 + 0.952268244773957 NA promoter-TSS (NM_172784) promoter-TSS (NM_172784) -316 NM_172784 237253 Mm.206759 NM_172784 ENSMUSG00000019796 Lrp11 1700034J19Rik|6330533B21|9830160H19Rik low density lipoprotein receptor-related protein 11 protein-coding common_peak2_351_3629_-0.0595068454437371_11.7960004101612_0.951906788894153 chr19 61265502 61267602 + 0.951906788894153 NA Intergenic CpG -38134 NM_009970 12982 Mm.287228 NM_009970 ENSMUSG00000059326 Csf2ra CD116|Csfgmra|GM-CSF-Ra|GM-CSFR colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) protein-coding common_peak2_316_3200_-0.0633920032867312_11.6126109599022_0.951830196118023 chr15 78568909 78574026 + 0.951830196118023 NA intron (NM_009008, intron 1 of 6) intron (NM_009008, intron 1 of 6) 1316 NM_009008 19354 Mm.1972 NM_009008 ENSMUSG00000033220 Rac2 AI323801|AI452260 RAS-related C3 botulinum substrate 2 protein-coding common_peak1_223_1893_0.0791810681086087_10.9268111495227_0.951551371185175 chr15 3978816 3980328 + 0.951551371185175 NA promoter-TSS (NM_134099) promoter-TSS (NM_134099) 1 NM_134099 106052 Mm.234191 NM_134099 ENSMUSG00000022184 Fbxo4 1700096C12Rik|AI851261|AW494535|Fbx4 F-box protein 4 protein-coding common_peak2_240_2076_0.0755659944100024_11.0580684980496_0.951224042388968 chr13 8869669 8871831 + 0.951224042388968 NA intron (NM_001039388, intron 1 of 13) intron (NM_001039388, intron 1 of 13) 294 NM_001039389 207615 Mm.284654 NM_172445 ENSMUSG00000021147 Wdr37 - WD repeat domain 37 protein-coding common_peak1_254_2466_-0.0727656362943456_11.2321591821529_0.950914544436747 chr15 88861444 88863860 + 0.950914544436747 NA 5' UTR (NM_145478, exon 1 of 6) 5' UTR (NM_145478, exon 1 of 6) 458 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding common_peak2_96_653_0.132191537865326_9.41924259443075_0.950489037476155 chrX 42423411 42426385 + 0.950489037476155 NA Intergenic Intergenic -77667 NM_011364 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak2_47_346_-0.198404073299809_8.33958981592836_0.950290337139523 chr10 118406364 118408020 + 0.950290337139523 NA Intergenic Intergenic -33854 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak1_47_346_-0.198404073299809_8.33958981592836_0.950290337139523 chr2 59646475 59647328 + 0.950290337139523 NA intron (NM_198294, intron 2 of 26) intron (NM_198294, intron 2 of 26) 132 NM_001290659 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak2_82_653_-0.143640956329735_9.28132634733322_0.950289817377202 chr7 123321500 123323930 + 0.950289817377202 NA intron (NM_001316713, intron 4 of 19) intron (NM_001316713, intron 4 of 19) 47200 NM_001122643 70497 Mm.403318 NM_144529 ENSMUSG00000030766 Arhgap17 5730403H17Rik|Nadrin|Nadrin2|Rich1|Wbp15 Rho GTPase activating protein 17 protein-coding common_peak1_47_261_0.206964777741002_8.13690539040795_0.949960441528274 chr7 16738384 16739043 + 0.949960441528274 NA intron (NM_198613, intron 1 of 4) intron (NM_198613, intron 1 of 4) 269 NM_198613 232910 Mm.333597 NM_198613 ENSMUSG00000008036 Ap2s1 AI043088 adaptor-related protein complex 2, sigma 1 subunit protein-coding common_peak1_47_261_0.206964777741002_8.13690539040795_0.949960441528274-2 chrX 7762718 7763400 + 0.949960441528274 NA promoter-TSS (NM_001271491) promoter-TSS (NM_001271491) 398 NM_172472 209446 Mm.249142 NM_172472 ENSMUSG00000000134 Tfe3 F830016E06Rik|Tcfe3|Tfe-3|bHLHe33 transcription factor E3 protein-coding common_peak2_47_261_0.206964777741002_8.13690539040795_0.949960441528274 chr19 45559973 45561071 + 0.949960441528274 NA promoter-TSS (NM_172639) promoter-TSS (NM_172639) 21 NM_020032 56626 Mm.46509 NM_020032 ENSMUSG00000025218 Poll 1110003P06Rik|AV007317 polymerase (DNA directed), lambda protein-coding common_peak1_89_593_0.138471827950221_9.28355503477588_0.9492476699844 chr1 156558598 156559736 + 0.9492476699844 NA exon (NM_009595, exon 1 of 12) exon (NM_009595, exon 1 of 12) 380 NM_001136104 11352 Mm.329515 NM_009595 ENSMUSG00000026596 Abl2 AA536808|Abll|Arg v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) protein-coding unique_peak2_24_166_-0.297689100337668_7.23485974230522_0.949226066125567 chr17 44654648 44655575 + 0.949226066125567 NA intron (NM_001271631, intron 2 of 4) intron (NM_001271631, intron 2 of 4) 81065 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak2_24_166_-0.297689100337668_7.23485974230522_0.949226066125567 chr2 13406537 13407459 + 0.949226066125567 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 84878 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak1_24_166_-0.297689100337668_7.23485974230522_0.949226066125567 chr6 130169723 130170181 + 0.949226066125567 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -9204 NR_104105 654449 Mm.439698 NM_008461 ENSMUSG00000072721 Klra14-ps EG654449|Gm15858|Klra14|Klra29|Klra31|Ly49N|OTTMUSG00000026959 killer cell lectin-like receptor subfamily A, member 14, pseudogene pseudo unique_peak2_24_166_-0.297689100337668_7.23485974230522_0.949226066125567-2 chrX 98265614 98266800 + 0.949226066125567 NA intron (NM_013476, intron 2 of 7) intron (NM_013476, intron 2 of 7) 117450 NM_013476 11835 Mm.39005 NM_013476 ENSMUSG00000046532 Ar AW320017|Tfm androgen receptor protein-coding common_peak2_30_211_-0.261238249828892_7.59730132964875_0.948824996589169 chr3 14911701 14912961 + 0.948824996589169 NA Intergenic Intergenic 25905 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding unique_peak2_30_211_-0.261238249828892_7.59730132964875_0.948824996589169 chr9 83440401 83441669 + 0.948824996589169 NA promoter-TSS (NM_027448) promoter-TSS (NM_027448) 64 NM_027448 75782 Mm.199698 NM_027448 ENSMUSG00000032258 Lca5 4930431B11Rik|5730406O13Rik|AV274874|ORF64 Leber congenital amaurosis 5 (human) protein-coding common_peak1_30_211_-0.261238249828892_7.59730132964875_0.948824996589169 chr5 107978635 107979345 + 0.948824996589169 NA intron (NM_026062, intron 1 of 4) intron (NM_026062, intron 1 of 4) 8087 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_24_109_0.304655478611724_6.93368745283052_0.948468077906396 chr13 115171355 115171835 + 0.948468077906396 NA Intergenic Intergenic -69631 NM_001033228 109700 Mm.317280 NM_001033228 ENSMUSG00000042284 Itga1 CD49A|E130012M19Rik|Vla1 integrin alpha 1 protein-coding unique_peak2_24_109_0.304655478611724_6.93368745283052_0.948468077906396 chr1 161673814 161674574 + 0.948468077906396 NA Intergenic Intergenic 114301 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_24_109_0.304655478611724_6.93368745283052_0.948468077906396 chr6 54162265 54162876 + 0.948468077906396 NA intron (NM_001163640, intron 1 of 12) intron (NM_001163640, intron 1 of 12) -102288 NM_001311133 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding unique_peak2_24_109_0.304655478611724_6.93368745283052_0.948468077906396-2 chr3 139043833 139044829 + 0.948468077906396 NA intron (NM_145544, intron 2 of 13) intron (NM_145544, intron 2 of 13) 30870 NM_145544 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding unique_peak2_24_109_0.304655478611724_6.93368745283052_0.948468077906396-3 chr5 34190396 34191431 + 0.948468077906396 NA Intergenic Intergenic -3203 NM_010753 17122 Mm.259260 NM_010753 ENSMUSG00000037235 Mxd4 2810410A03Rik|Mad4|bHLHc12 Max dimerization protein 4 protein-coding common_peak1_24_109_0.304655478611724_6.93368745283052_0.948468077906396-2 chr3 95312055 95312619 + 0.948468077906396 NA Intergenic Intergenic -2915 NM_029789 76893 Mm.181009 NM_029789 ENSMUSG00000015714 Cers2 0610013I17Rik|AI225939|Lass2|TRH3 ceramide synthase 2 protein-coding common_peak2_69_428_0.163224188210345_8.82644593160472_0.948042679332829 chr10 40447176 40448652 + 0.948042679332829 NA intron (NM_001291817, intron 4 of 11) intron (NM_001291817, intron 4 of 11) 98606 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak2_119_858_0.115366733831953_9.80419768805444_0.948038931315746 chr15 73738546 73741534 + 0.948038931315746 NA intron (NM_001166388, intron 1 of 5) intron (NM_001166388, intron 1 of 5) -7986 NM_008975 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak2_255_2477_-0.0722579642700101_11.2388314900056_0.947956248030069 chr2 73483387 73487360 + 0.947956248030069 NA intron (NM_153138, intron 1 of 7) intron (NM_153138, intron 1 of 7) 380 NM_001289723 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak2_167_1499_-0.0934352080256762_10.5040291813704_0.947648730485364 chr3 113629231 113631135 + 0.947648730485364 NA promoter-TSS (NM_001038696) promoter-TSS (NM_001038696) -34 NM_001038696 67225 Mm.316928 NM_026043 ENSMUSG00000027981 Rnpc3 2810441O16Rik|AI447568|C030014B17Rik RNA-binding region (RNP1, RRM) containing 3 protein-coding common_peak1_27_127_0.286564750017925_7.14328237500896_0.947467419899041-2 chr16 17013446 17014008 + 0.947467419899041 NA intron (NM_011949, intron 1 of 8) Lx8|LINE|L1 30345 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak1_27_127_0.286564750017925_7.14328237500896_0.947467419899041 chr10 40400582 40400965 + 0.947467419899041 NA intron (NM_001291817, intron 2 of 11) Lx7|LINE|L1 51465 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak2_27_127_0.286564750017925_7.14328237500896_0.947467419899041 chr19 18599844 18600963 + 0.947467419899041 NA intron (NM_017375, intron 2 of 9) intron (NM_017375, intron 2 of 9) 31410 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak2_27_127_0.286564750017925_7.14328237500896_0.947467419899041-2 chr7 73524450 73525285 + 0.947467419899041 NA intron (NM_001081345, intron 2 of 38) intron (NM_001081345, intron 2 of 38) 16879 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak1_161_1257_0.0960381872999463_10.3449353005293_0.947420828849587 chr12 77237858 77239609 + 0.947420828849587 NA promoter-TSS (NR_045554) promoter-TSS (NR_045554) -6 NR_045554 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding common_peak2_40_289_-0.218465824949509_8.07067617754018_0.947417337849245 chr10 18138732 18140122 + 0.947417337849245 NA intron (NM_001195036, intron 17 of 20) IAPLTR2_Mm|LTR|ERVK 71463 NM_001195036 100045792 Mm.380617 NM_001195036 ENSMUSG00000071392 Ect2l C330021H03Rik|ENSMUSG00000071392|Gm10331 epithelial cell transforming sequence 2 oncogene-like protein-coding unique_peak2_16_109_-0.377823452550488_6.59244798724942_0.94741050925528 chr10 121315516 121316504 + 0.94741050925528 NA Intergenic Intergenic -4821 NM_029057 74694 Mm.233833 NM_029057 ENSMUSG00000052302 Tbc1d30 4930505D03Rik TBC1 domain family, member 30 protein-coding unique_peak2_16_109_-0.377823452550488_6.59244798724942_0.94741050925528-2 chr4 44270836 44271923 + 0.94741050925528 NA Intergenic ORR1D2-int|LTR|ERVL-MaLR -29538 NM_010790 17279 Mm.268668 NM_010790 ENSMUSG00000035683 Melk AI327312|MPK38|mKIAA0175 maternal embryonic leucine zipper kinase protein-coding common_peak1_16_109_-0.377823452550488_6.59244798724942_0.94741050925528 chr7 24394565 24395010 + 0.94741050925528 NA Intergenic Intergenic -4841 NM_028047 71997 Mm.150977 NM_028047 ENSMUSG00000002210 Smg9 1500002O20Rik|AI429693|N28092 smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_80_635_-0.146540872291476_9.23961251913862_0.947352923118564 chrX 73785920 73787030 + 0.947352923118564 NA promoter-TSS (NM_009279) promoter-TSS (NM_009279) 422 NM_008323 15929 Mm.14825 NM_008323 ENSMUSG00000002010 Idh3g - isocitrate dehydrogenase 3 (NAD+), gamma protein-coding common_peak2_87_699_-0.138188746765666_9.3821167384495_0.946855895408131 chr4 118408701 118410149 + 0.946855895408131 NA promoter-TSS (NM_198170) promoter-TSS (NM_198170) 88 NM_020000 80509 Mm.259567 NM_020000 ENSMUSG00000006392 Med8 2210021A15Rik|AB041805|ARC32 mediator complex subunit 8 protein-coding common_peak1_109_908_-0.120233154621836_9.76801990688319_0.946678669430182 chr13 55471586 55472841 + 0.946678669430182 NA exon (NM_001030296, exon 2 of 3) exon (NM_001030296, exon 2 of 3) 5563 NR_105909 102465569 NR_105909 ENSMUSG00000098341 Mir6944 Gm27710|mmu-mir-6944 microRNA 6944 ncRNA common_peak1_40_212_0.226733644839587_7.84807644264563_0.946571335865189-4 chr8 36097063 36097891 + 0.946571335865189 NA intron (NM_172911, intron 1 of 5) intron (NM_172911, intron 1 of 5) 2649 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_40_212_0.226733644839587_7.84807644264563_0.946571335865189 chr16 84734888 84735691 + 0.946571335865189 NA promoter-TSS (NM_017404) promoter-TSS (NM_017404) 13 NM_017404 27393 Mm.103655 NM_017404 ENSMUSG00000022889 Mrpl39 C21orf8|MRP-L5|ORF22|Rpml5 mitochondrial ribosomal protein L39 protein-coding unique_peak2_35_249_-0.234486611603064_7.84854097886056_0.946571335865189 chr3 115689093 115690296 + 0.946571335865189 NA Intergenic Intergenic 25361 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding common_peak1_40_212_0.226733644839587_7.84807644264563_0.946571335865189-2 chr2 144458766 144459516 + 0.946571335865189 NA promoter-TSS (NR_033459) promoter-TSS (NR_033459) -139 NR_033459 668917 Mm.152805 NR_033459 ENSMUSG00000083674 Zfp133-ps OTTMUSG00000003825|Zfp133 zinc finger protein 133, pseudogene pseudo unique_peak2_40_212_0.226733644839587_7.84807644264563_0.946571335865189 chr6 130104535 130106250 + 0.946571335865189 NA intron (NM_013793, intron 3 of 7) L1_Mus1|LINE|L1 24443 NM_010650 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding unique_peak2_35_249_-0.234486611603064_7.84854097886056_0.946571335865189-2 chr9 22475264 22476567 + 0.946571335865189 NA 5' UTR (NM_178415, exon 1 of 23) 5' UTR (NM_178415, exon 1 of 23) 200 NM_178415 319845 Mm.176725 NM_178415 ENSMUSG00000035919 Bbs9 E130103I17Rik Bardet-Biedl syndrome 9 (human) protein-coding common_peak1_40_212_0.226733644839587_7.84807644264563_0.946571335865189-3 chr6 128834010 128834787 + 0.946571335865189 NA Intergenic L1MB3|LINE|L1 -8083 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak2_130_959_0.110196666238355_9.9619889287277_0.946536680498208 chr12 51376736 51378411 + 0.946536680498208 NA promoter-TSS (NM_001306178) promoter-TSS (NM_001306178) 60 NM_029825 76983 Mm.216511 NM_029825 ENSMUSG00000020952 Scfd1 3110021P21Rik|RA410|STXBP1L2 Sec1 family domain containing 1 protein-coding common_peak2_49_276_0.198885337273552_8.21318483468596_0.946429906289409 chr10 95008210 95009965 + 0.946429906289409 NA Intergenic Intergenic -64509 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding common_peak2_87_576_0.140594856421181_9.24272493685607_0.946285510286791 chr2 37430203 37431626 + 0.946285510286791 NA promoter-TSS (NM_146253) promoter-TSS (NM_146253) 5 NM_146253 241322 Mm.330182 NM_146253 ENSMUSG00000066798 Zbtb6 A830092L04Rik|ZID|Zfp482 zinc finger and BTB domain containing 6 protein-coding common_peak1_67_518_-0.162829845010998_8.93817580585238_0.946163256404096 chr11 74896050 74897299 + 0.946163256404096 NA intron (NM_197943, intron 1 of 22) CpG 406 NM_197943 97761 Mm.245894 NM_197943 ENSMUSG00000038351 Sgsm2 D630003G22Rik|R74628|Rutbc1|mKIAA0397 small G protein signaling modulator 2 protein-coding common_peak1_99_679_0.129848878371392_9.4743153753234_0.945981788166926 chr4 149695280 149696404 + 0.945981788166926 NA intron (NM_001029837, intron 1 of 23) B1_Mur4|SINE|Alu 2866 NM_001164050 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak2_270_2651_-0.0693975267651812_11.33816629673_0.945907395952082 chr6 136496593 136501485 + 0.945907395952082 NA Intergenic B1_Mur3|SINE|Alu -19812 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_16_64_0.381168447945718_6.21295203700131_0.945872376852013-4 chr6 117905240 117905686 + 0.945872376852013 NA intron (NM_001166432, intron 1 of 3) intron (NM_001166432, intron 1 of 3) -1319 NM_001166431 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_16_64_0.381168447945718_6.21295203700131_0.945872376852013-5 chr8 85082664 85083011 + 0.945872376852013 NA promoter-TSS (NM_010764) promoter-TSS (NM_010764) -432 NM_010764 17159 Mm.4219 NM_010764 ENSMUSG00000005142 Man2b1 AW107687|LAMAN mannosidase 2, alpha B1 protein-coding common_peak1_16_64_0.381168447945718_6.21295203700131_0.945872376852013-3 chr2 68979109 68979476 + 0.945872376852013 NA intron (NM_172856, intron 3 of 9) intron (NM_172856, intron 3 of 9) 117735 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak1_16_64_0.381168447945718_6.21295203700131_0.945872376852013 chr10 91187692 91188072 + 0.945872376852013 NA Intergenic Intergenic -16263 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding unique_peak2_16_64_0.381168447945718_6.21295203700131_0.945872376852013 chr11 104630455 104631086 + 0.945872376852013 NA intron (NM_016780, intron 2 of 14) intron (NM_016780, intron 2 of 14) 22770 NM_016780 16416 Mm.87150 NM_016780 ENSMUSG00000020689 Itgb3 CD61|GP3A|INGRB3 integrin beta 3 protein-coding unique_peak2_16_64_0.381168447945718_6.21295203700131_0.945872376852013-2 chr17 44819018 44819612 + 0.945872376852013 NA intron (NM_178652, intron 2 of 11) intron (NM_178652, intron 2 of 11) -4518 NR_073392 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_16_64_0.381168447945718_6.21295203700131_0.945872376852013-2 chr14 55603018 55603471 + 0.945872376852013 NA promoter-TSS (NM_001159417) promoter-TSS (NM_001159417) -741 NM_008394 16391 Mm.2032 NM_008394 ENSMUSG00000002325 Irf9 Irf-9|Isgf3g|p48 interferon regulatory factor 9 protein-coding unique_peak2_35_178_0.247481895794767_7.60755672516164_0.945494492160303 chr7 19325970 19327275 + 0.945494492160303 NA Intergenic Intergenic -16577 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding common_peak1_35_178_0.247481895794767_7.60755672516164_0.945494492160303 chr2 5894838 5895375 + 0.945494492160303 NA intron (NM_021305, intron 1 of 11) CpG 247 NM_021305 57743 Mm.21435 NM_021305 ENSMUSG00000025816 Sec61a2 - Sec61, alpha subunit 2 (S. cerevisiae) protein-coding unique_peak2_35_178_0.247481895794767_7.60755672516164_0.945494492160303-2 chr7 28799499 28800712 + 0.945494492160303 NA Intergenic ORR1E|LTR|ERVL-MaLR -10785 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak1_65_500_-0.164734534347971_8.88629952602122_0.945470781339161 chr1 88684855 88686006 + 0.945470781339161 NA Intergenic Intergenic 16761 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak2_147_1120_0.102437710778698_10.1817894181948_0.945130637581389 chr11 116253066 116255975 + 0.945130637581389 NA intron (NM_146032, intron 8 of 15) intron (NM_146032, intron 8 of 15) -16429 NM_025276 14027 Mm.293683 NM_025276 ENSMUSG00000034282 Evpl - envoplakin protein-coding common_peak2_51_380_-0.191613631666034_8.4778403716603_0.945010321008541 chr15 100604046 100605800 + 0.945010321008541 NA Intergenic Intergenic -4939 NM_001304965 19009 Mm.28825 NM_010127 ENSMUSG00000009739 Pou6f1 2310038G18Rik|C79593|Emb|cns-1 POU domain, class 6, transcription factor 1 protein-coding common_peak1_133_987_0.108788779751402_10.0027616214604_0.945007648774394 chr15 103365340 103367164 + 0.945007648774394 NA intron (NM_001314041, intron 1 of 30) CpG 539 NM_010577 16402 Mm.16234 NM_010577 ENSMUSG00000000555 Itga5 Cd49e|Fnra|VLA5 integrin alpha 5 (fibronectin receptor alpha) protein-coding common_peak2_78_501_0.150555537162544_9.04682132253204_0.944973353694399-2 chr7 104464328 104465928 + 0.944973353694399 NA promoter-TSS (NM_009099) promoter-TSS (NM_009099) 65 NM_009099 20128 Mm.295578 NM_009099 ENSMUSG00000030921 Trim30a Rpt-1|Rpt1|Trim30 tripartite motif-containing 30A protein-coding common_peak2_78_501_0.150555537162544_9.04682132253204_0.944973353694399 chr2 60381936 60383620 + 0.944973353694399 NA intron (NM_013825, intron 1 of 34) intron (NM_013825, intron 1 of 34) 453 NM_013825 17076 Mm.2074 NM_013825 ENSMUSG00000026980 Ly75 CD205|DEC-205|DEC205 lymphocyte antigen 75 protein-coding common_peak2_186_1507_0.0884969608333606_10.6026691936853_0.944614209025029 chr18 63691346 63693295 + 0.944614209025029 NA promoter-TSS (NM_016792) promoter-TSS (NM_016792) 39 NM_016792 53382 Mm.19169 NM_016792 ENSMUSG00000024583 Txnl1 32kDa|TRP32|Txnl thioredoxin-like 1 protein-coding common_peak1_61_465_-0.170891628733617_8.77874033028747_0.943939312338472 chr16 8737375 8738387 + 0.943939312338472 NA intron (NM_001003918, intron 1 of 30) CpG 461 NM_001003918 252870 Mm.295330 NM_001003918 ENSMUSG00000022710 Usp7 2210010O09Rik|AA409944|AA617399|AU019296|AW548146|C80752|Hausp ubiquitin specific peptidase 7 protein-coding common_peak2_55_320_0.186747574081979_8.41980327416329_0.943424142162764 chr6 125131062 125132509 + 0.943424142162764 NA promoter-TSS (NM_138747) promoter-TSS (NM_138747) -98 NM_138747 110109 Mm.29203 NM_138747 ENSMUSG00000038279 Nop2 120kDa|A530002O17|Nol1 NOP2 nucleolar protein protein-coding common_peak1_92_619_0.134692315613352_9.34347056308091_0.943361316011322 chr2 103484535 103485888 + 0.943361316011322 NA promoter-TSS (NM_009804) promoter-TSS (NM_009804) -58 NM_009804 12359 Mm.4215 NM_009804 ENSMUSG00000027187 Cat 2210418N07|Cas-1|Cas1|Cs-1 catalase protein-coding common_peak2_20_137_-0.331049812979671_6.94299955028833_0.943204537362406 chr4 154878034 154878648 + 0.943204537362406 NA intron (NM_013783, intron 2 of 23) B4|SINE|B4 8756 NM_013783 27390 Mm.116944 NM_013783 ENSMUSG00000058183 Mmel1 Mell1|NEP2|NEPII|Nl1|SEP membrane metallo-endopeptidase-like 1 protein-coding unique_peak2_20_137_-0.331049812979671_6.94299955028833_0.943204537362406-2 chr4 83303225 83304243 + 0.943204537362406 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 20455 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_20_137_-0.331049812979671_6.94299955028833_0.943204537362406-2 chr2 152847930 152848406 + 0.943204537362406 NA 5' UTR (NM_001141977, exon 1 of 18) 5' UTR (NM_001141977, exon 1 of 18) 204 NM_028109 72119 Mm.407737 NM_028109 ENSMUSG00000027469 Tpx2 2610005B21Rik|DIL2|REPP86|p100 TPX2, microtubule-associated protein-coding unique_peak2_20_137_-0.331049812979671_6.94299955028833_0.943204537362406 chr1 125463855 125464972 + 0.943204537362406 NA Intergenic Intergenic -28686 NM_001205386 74117 Mm.183102 NM_023735 ENSMUSG00000026341 Actr3 1200003A09Rik|Arp3 ARP3 actin-related protein 3 protein-coding common_peak1_20_137_-0.331049812979671_6.94299955028833_0.943204537362406 chr12 11230527 11230957 + 0.943204537362406 NA Intergenic Intergenic -21794 NM_019544 56184 Mm.117113 NM_019544 ENSMUSG00000047002 Msgn1 Msgn|pMsgn1 mesogenin 1 protein-coding unique_peak2_20_137_-0.331049812979671_6.94299955028833_0.943204537362406-3 chr4 129460699 129461517 + 0.943204537362406 NA promoter-TSS (NM_133889) promoter-TSS (NM_133889) -571 NM_133889 100383 Mm.17918 NM_133889 ENSMUSG00000040859 Bsdc1 1110063F24Rik|AW011758 BSD domain containing 1 protein-coding common_peak2_42_305_-0.2116606724387_8.1515575064733_0.943105644078718 chr8 71485296 71486725 + 0.943105644078718 NA promoter-TSS (NM_001164679) promoter-TSS (NM_001164679) 57 NM_001164679 382014 Mm.260360 NM_001164679 ENSMUSG00000034863 Ano8 BC053460|Tmem16h anoctamin 8 protein-coding common_peak1_42_305_-0.2116606724387_8.1515575064733_0.943105644078718 chr5 147894150 147894829 + 0.943105644078718 NA 5' UTR (NM_027872, exon 1 of 6) 5' UTR (NM_027872, exon 1 of 6) 313 NM_027872 71706 Mm.153218 NM_027872 ENSMUSG00000029650 Slc46a3 1200006F02Rik solute carrier family 46, member 3 protein-coding common_peak1_112_794_0.120708448000682_9.69516527417206_0.942970772188255 chr16 30069594 30071108 + 0.942970772188255 NA Intergenic CpG 4994 NM_008235 15205 Mm.390859 NM_008235 ENSMUSG00000022528 Hes1 Hry|bHLHb39 hairy and enhancer of split 1 (Drosophila) protein-coding common_peak2_239_2066_0.0751706927313247_11.0509080197911_0.942927085989137 chr11 97726788 97730122 + 0.942927085989137 NA intron (NM_054051, intron 3 of 9) intron (NM_054051, intron 3 of 9) 16249 NM_054051 108083 Mm.39700 NM_054051 ENSMUSG00000018547 Pip4k2b AI848124|PI5P4Kbeta|Pip5k2b|c11 phosphatidylinositol-5-phosphate 4-kinase, type II, beta protein-coding common_peak1_139_1207_-0.103734402428833_10.1865375381107_0.942919145379285 chr18 34372244 34373465 + 0.942919145379285 NA intron (NM_007874, intron 1 of 4) intron (NM_007874, intron 1 of 4) 561 NM_007874 13476 Mm.280075 NM_007874 ENSMUSG00000005873 Reep5 AI324241|AU022809|AW495741|DP1/TB2|Dp1|R74856|TB2/DP1 receptor accessory protein 5 protein-coding common_peak1_61_366_0.173658263077449_8.60646538438194_0.942854993400874 chr7 127572474 127573185 + 0.942854993400874 NA promoter-TSS (NM_026888) promoter-TSS (NM_026888) -519 NM_026888 68961 Mm.274473 NM_026888 ENSMUSG00000030815 Phkg2 1500017I02Rik phosphorylase kinase, gamma 2 (testis) protein-coding common_peak1_165_1296_0.0951554161030046_10.3885404723032_0.942708231152687 chr12 21226663 21228044 + 0.942708231152687 NA intron (NM_001135192, intron 13 of 28) intron (NM_001135192, intron 13 of 28) 58884 NM_008403 16413 Mm.273333 NM_008403 ENSMUSG00000062352 Itgb1bp1 AI449260|AU019480|Icap1 integrin beta 1 binding protein 1 protein-coding common_peak1_193_1778_-0.0849001207173945_10.7544007349085_0.942255641922751 chr13 41000233 41001847 + 0.942255641922751 NA promoter-TSS (NM_026550) promoter-TSS (NM_026550) 30 NM_026550 68083 Mm.24789 NM_026550 ENSMUSG00000038683 Pak1ip1 5830431I15Rik|5930415H02Rik|AA419825|AI314040|AW556169|Gdpd1|PIP1 PAK1 interacting protein 1 protein-coding common_peak2_59_351_0.175837125146764_8.54735018121068_0.941875855917338 chr10 118458386 118460941 + 0.941875855917338 NA Intergenic Lx8|LINE|L1 18617 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak2_59_351_0.175837125146764_8.54735018121068_0.941875855917338-2 chr4 152038764 152040276 + 0.941875855917338 NA exon (NM_001159599, exon 1 of 12) exon (NM_001159599, exon 1 of 12) 199 NM_028727 74035 Mm.275803 NM_028727 ENSMUSG00000028948 Nol9 4632412I24Rik|6030462G04Rik|AI449622|AW490720 nucleolar protein 9 protein-coding common_peak2_42_226_0.219178682963036_7.93613782877243_0.941592597991209 chr2 4579923 4581629 + 0.941592597991209 NA intron (NM_001177843, intron 14 of 23) intron (NM_001177843, intron 14 of 23) 21022 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294 FERM domain containing 4A protein-coding common_peak1_42_226_0.219178682963036_7.93613782877243_0.941592597991209 chr13 43215698 43216460 + 0.941592597991209 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -44578 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_90_727_-0.135449597478649_9.44006984145937_0.941137642290808 chr7 126470184 126471357 + 0.941137642290808 NA intron (NR_110346, intron 4 of 9) (GAAA)n|Simple_repeat|Simple_repeat 2324 NR_110346 20399 Mm.8538 NM_011363 ENSMUSG00000030733 Sh2b1 AI425885|C530001K22Rik|Irip|Psm|SH2-B|SH2-Bb|Sh2bpsm1|mKIAA1299 SH2B adaptor protein 1 protein-coding common_peak1_20_86_0.33453114794977_6.61020906982361_0.940781334286583-6 chr7 73597688 73598165 + 0.940781334286583 NA Intergenic Intergenic -39531 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_20_86_0.33453114794977_6.61020906982361_0.940781334286583-5 chr4 141869578 141870161 + 0.940781334286583 NA intron (NM_025994, intron 1 of 3) intron (NM_025994, intron 1 of 3) 5051 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_20_86_0.33453114794977_6.61020906982361_0.940781334286583-2 chr11 75173242 75173648 + 0.940781334286583 NA promoter-TSS (NR_029546) promoter-TSS (NR_029546) 57 NR_029794 387208 NR_029794 ENSMUSG00000065590 Mir212 Mirn212|mir-212|mmu-mir-212 microRNA 212 ncRNA common_peak1_20_86_0.33453114794977_6.61020906982361_0.940781334286583 chr10 96201170 96201563 + 0.940781334286583 NA Intergenic Intergenic -24841 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_20_86_0.33453114794977_6.61020906982361_0.940781334286583-4 chr17 21651647 21652190 + 0.940781334286583 NA intron (NM_001166497, intron 1 of 5) intron (NM_001166497, intron 1 of 5) 1307 NM_001166497 73229 Mm.296733 NM_001166497 ENSMUSG00000035868 Zfp983 3110052M02Rik|mszf57|mszf71 zinc finger protein 983 protein-coding common_peak1_20_86_0.33453114794977_6.61020906982361_0.940781334286583-3 chr12 108087115 108087501 + 0.940781334286583 NA Intergenic Intergenic -83894 NM_021399 58208 Mm.392694 NM_021399 ENSMUSG00000048251 Bcl11b 9130430L19Rik|AI604821|B630002E05Rik|BCL-11B|Ctip2|Rit1 B cell leukemia/lymphoma 11B protein-coding common_peak2_190_1549_0.0863190058251941_10.6412120030742_0.940608203733472 chr12 84217119 84219599 + 0.940608203733472 NA intron (NM_001163501, intron 1 of 12) intron (NM_001163501, intron 1 of 12) 522 NM_001163501 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_90_602_0.136330850819963_9.30417961731007_0.940016807701564 chr14 62331461 62332913 + 0.940016807701564 NA promoter-TSS (NM_026001) promoter-TSS (NM_026001) 82 NM_026001 67153 Mm.26040 NM_026001 ENSMUSG00000021932 Rnaseh2b 1110019N06Rik|2610207P08Rik|Dleu8 ribonuclease H2, subunit B protein-coding common_peak2_44_321_-0.204738240549986_8.22854775783962_0.939965279164185-2 chrX 36644516 36645570 + 0.939965279164185 NA intron (NM_001081956, intron 1 of 6) CpG 371 NM_001081956 338351 Mm.116704 NM_001081956 ENSMUSG00000059708 Akap17b AA407619|AKAP-17B|B230333C21Rik|C230056F04Rik|PRKA17B|Sfrs17b|Srsf17b|Talia A kinase (PRKA) anchor protein 17B protein-coding common_peak2_44_321_-0.204738240549986_8.22854775783962_0.939965279164185 chr18 39518937 39520809 + 0.939965279164185 NA Intergenic Intergenic -32628 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding unique_peak2_32_226_-0.249228539630035_7.7019342174759_0.939683655115863 chr19 37332650 37334340 + 0.939683655115863 NA Intergenic Intergenic -2882 NM_031156 15925 Mm.28366 NM_031156 ENSMUSG00000056999 Ide 1300012G03Rik|4833415K22Rik|AA675336|AI507533 insulin degrading enzyme protein-coding common_peak1_32_226_-0.249228539630035_7.7019342174759_0.939683655115863-2 chr4 46583143 46583841 + 0.939683655115863 NA intron (NM_001164804, intron 1 of 11) MMTV-int|LTR|ERVK -17052 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding unique_peak2_32_226_-0.249228539630035_7.7019342174759_0.939683655115863-2 chr5 34948711 34949973 + 0.939683655115863 NA promoter-TSS (NM_173402) promoter-TSS (NM_173402) -106 NM_173402 71729 Mm.196208 NM_173402 ENSMUSG00000029101 Rgs12 1200016K18Rik|4632412M04Rik|AI481290|E130309H11 regulator of G-protein signaling 12 protein-coding common_peak1_32_226_-0.249228539630035_7.7019342174759_0.939683655115863 chr19 8785843 8786625 + 0.939683655115863 NA promoter-TSS (NM_146092) promoter-TSS (NM_146092) 82 NM_146092 225895 Mm.220886 NM_146092 ENSMUSG00000003680 Taf6l 2810417N14Rik|BB223262|C530024J06Rik|Paf65a TATA-box binding protein associated factor 6 like protein-coding common_peak2_32_226_-0.249228539630035_7.7019342174759_0.939683655115863 chr13 12649682 12650943 + 0.939683655115863 NA promoter-TSS (NR_003568) promoter-TSS (NR_003568) 83 NR_003568 664862 Mm.415635 NR_003568 Gpr137b-ps 2310041G17Rik|ENSMUSG00000075118 G protein-coupled receptor 137B, pseudogene pseudo common_peak2_100_821_-0.126146390076226_9.61992138864357_0.939150336684842 chr5 135701834 135704257 + 0.939150336684842 NA intron (NM_008898, intron 1 of 15) MER58A|DNA|hAT-Charlie 13900 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak2_37_265_-0.228305920917943_7.94112947504222_0.938983476894528 chr15 95790145 95791505 + 0.938983476894528 NA promoter-TSS (NM_175344) promoter-TSS (NM_175344) -18 NM_175344 105722 Mm.38087 NM_175344 ENSMUSG00000064210 Ano6 2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f anoctamin 6 protein-coding common_peak1_37_265_-0.228305920917943_7.94112947504222_0.938983476894528 chr8 83331868 83332488 + 0.938983476894528 NA intron (NM_001170691, intron 1 of 8) CpG 308 NM_001170691 244548 Mm.38762 NM_178736 ENSMUSG00000035151 Elmod2 9830169G11Rik ELMO/CED-12 domain containing 2 protein-coding common_peak1_72_562_-0.154672085694601_9.05965506923293_0.938938359916534 chr4 149761314 149762432 + 0.938938359916534 NA intron (NM_027460, intron 2 of 6) intron (NM_027460, intron 2 of 6) 12394 NM_027460 70556 Mm.41877 NM_027460 ENSMUSG00000028982 Slc25a33 5730438N18Rik|Pnc1 solute carrier family 25, member 33 protein-coding common_peak2_178_1427_0.0897643213936696_10.5246624247259_0.938430178344213 chr10 93374273 93376563 + 0.938430178344213 NA Intergenic Intergenic 39186 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak1_23_158_-0.299107487192261_7.16332921168823_0.938426755972622 chr17 15526917 15527317 + 0.938426755972622 NA exon (NM_008799, exon 1 of 6) exon (NM_008799, exon 1 of 6) 184 NM_008799 18567 Mm.323 NM_008799 ENSMUSG00000014771 Pdcd2 AI528543|Pcd2|RP-8 programmed cell death 2 protein-coding common_peak2_23_158_-0.299107487192261_7.16332921168823_0.938426755972622 chr6 125088358 125089310 + 0.938426755972622 NA Intergenic Intergenic -7329 NM_145979 107932 Mm.333388 NM_145979 ENSMUSG00000063870 Chd4 9530019N15Rik|AA617397|BC005710|D6Ertd380e|Mi-2beta|mKIAA4075 chromodomain helicase DNA binding protein 4 protein-coding common_peak1_44_240_0.21328930133467_8.0195339868973_0.938009746039867 chr5 115542911 115543649 + 0.938009746039867 NA intron (NM_011223, intron 1 of 10) MIRb|SINE|MIR -16187 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding unique_peak2_15_102_-0.390247264058051_6.49137689515419_0.937394891182587 chr3 101600242 101601306 + 0.937394891182587 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 3933 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak1_15_102_-0.390247264058051_6.49137689515419_0.937394891182587-3 chr4 6682206 6682657 + 0.937394891182587 NA Intergenic Intergenic -228160 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding common_peak1_15_102_-0.390247264058051_6.49137689515419_0.937394891182587 chr11 6006853 6007279 + 0.937394891182587 NA intron (NM_001174053, intron 3 of 19) RLTR4_MM-int|LTR|ERV1 51308 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding unique_peak2_15_102_-0.390247264058051_6.49137689515419_0.937394891182587-2 chr4 134653454 134654255 + 0.937394891182587 NA intron (NM_207237, intron 1 of 11) intron (NM_207237, intron 1 of 11) 50436 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak1_15_102_-0.390247264058051_6.49137689515419_0.937394891182587-2 chr17 29553118 29553599 + 0.937394891182587 NA intron (NM_198647, intron 1 of 12) B1_Mur1|SINE|Alu 3556 NM_198647 381085 Mm.328934 NM_198647 ENSMUSG00000042203 Tbc1d22b BC045600 TBC1 domain family, member 22B protein-coding unique_peak2_32_159_0.255391852773517_7.44962402127412_0.937228866728669 chr5 31012338 31013771 + 0.937228866728669 NA Intergenic Intergenic 35025 NM_177870 330064 Mm.205463 NM_177870 ENSMUSG00000006641 Slc5a6 E430023I20 solute carrier family 5 (sodium-dependent vitamin transporter), member 6 protein-coding common_peak1_32_159_0.255391852773517_7.44962402127412_0.937228866728669 chr10 93443291 93444004 + 0.937228866728669 NA Intergenic B3|SINE|B2 -9749 NM_001313897 16993 Mm.271071 NM_008517 ENSMUSG00000015889 Lta4h - leukotriene A4 hydrolase protein-coding common_peak2_32_159_0.255391852773517_7.44962402127412_0.937228866728669 chr8 121572728 121574139 + 0.937228866728669 NA intron (NM_133765, intron 1 of 8) intron (NM_133765, intron 1 of 8) 5373 NM_133765 76454 Mm.24829 NM_133765 ENSMUSG00000052934 Fbxo31 1110003O08Rik|2310046N15Rik|Fbx14|Fbxo14 F-box protein 31 protein-coding common_peak1_70_544_-0.156952873817271_9.01163598275565_0.937216934048455 chr6 33059611 33060502 + 0.937216934048455 NA promoter-TSS (NM_025336) promoter-TSS (NM_025336) 96 NM_025336 66075 Mm.21501 NM_025336 ENSMUSG00000053768 Chchd3 0610041L09Rik|1700039J09Rik|AW558177 coiled-coil-helix-coiled-coil-helix domain containing 3 protein-coding common_peak1_227_1937_0.0773704865078066_10.959038098669_0.937171641608927 chr12 4906697 4908356 + 0.937171641608927 NA promoter-TSS (NM_145441) promoter-TSS (NM_145441) -6 NM_145441 217379 Mm.259170 NM_145441 ENSMUSG00000020634 Ubxn2a 6330407P03Rik|Ubxd4 UBX domain protein 2A protein-coding common_peak2_126_923_0.110461652757987_9.90697986779505_0.937034018571088 chr7 29953102 29954777 + 0.937034018571088 NA Intergenic CpG -2046 NM_178384 72723 Mm.371648 NM_178384 ENSMUSG00000059975 Zfp74 2810054M15Rik|KRAB8|Zfp66|Znf569|mszf21|mszf77 zinc finger protein 74 protein-coding common_peak2_362_3764_-0.0577327887705579_11.849567755174_0.936803600743728 chr11 23768653 23772391 + 0.936803600743728 NA intron (NM_009044, intron 1 of 9) CpG 448 NM_009044 19696 Mm.4869 NM_009044 ENSMUSG00000020275 Rel c-Rel reticuloendotheliosis oncogene protein-coding common_peak1_37_192_0.234519477315166_7.70971677592566_0.936628049914802-2 chr3 106002990 106003588 + 0.936628049914802 NA intron (NM_001200028, intron 1 of 5) L1_Mus3|LINE|L1 -1792 NM_029604 100503311 Mm.386825 NM_029604 ENSMUSG00000010136 Pifo 1700027A23Rik primary cilia formation protein-coding common_peak1_37_192_0.234519477315166_7.70971677592566_0.936628049914802 chr14 122985882 122986416 + 0.936628049914802 NA Intergenic RMER17C|LTR|ERVK -2888 NM_028651 70551 Mm.271988 NM_028651 ENSMUSG00000041594 Tmtc4 4930403J22Rik|5730419O14Rik transmembrane and tetratricopeptide repeat containing 4 protein-coding common_peak1_37_192_0.234519477315166_7.70971677592566_0.936628049914802-3 chr7 127903969 127904586 + 0.936628049914802 NA intron (NM_009739, intron 1 of 11) intron (NM_009739, intron 1 of 11) 204 NM_009739 12041 Mm.425495 NM_009739 ENSMUSG00000030802 Bckdk AI327402 branched chain ketoacid dehydrogenase kinase protein-coding unique_peak2_26_180_-0.277638320243611_7.3610267269614_0.936253055596148 chr9 50729011 50730339 + 0.936253055596148 NA intron (NM_001311069, intron 1 of 19) intron (NM_001311069, intron 1 of 19) -1691 NM_178118 330938 Mm.82598 NM_178118 ENSMUSG00000032064 Dixdc1 4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735 DIX domain containing 1 protein-coding common_peak2_185_1691_-0.0870848210460036_10.6809714425969_0.936167553889094 chr3 58524293 58526836 + 0.936167553889094 NA promoter-TSS (NM_001005509) promoter-TSS (NM_001005509) -257 NM_001005509 229317 Mm.21617 NM_001005509 ENSMUSG00000027810 Eif2a D030048D22|D3Ertd194e eukaryotic translation initiation factor 2A protein-coding common_peak2_93_755_-0.132499025608697_9.49599291141672_0.936155770100633 chr13 98290806 98292787 + 0.936155770100633 NA Intergenic ID_B1|SINE|B4 25171 NM_145455 218490 Mm.371688 NM_145455 ENSMUSG00000021660 Btf3 1700054E11Rik basic transcription factor 3 protein-coding common_peak2_79_625_-0.14565999692913_9.21718884846805_0.935957798086042 chr3 79193602 79195730 + 0.935957798086042 NA Intergenic MLTR11B|LTR|ERVK -18253 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak1_29_203_-0.263768909373792_7.5405408872846_0.93583644437727-2 chr6 48682797 48683284 + 0.93583644437727 NA Intergenic Intergenic -1538 NM_001243200 107526 Mm.333048 NM_174990 ENSMUSG00000054435 Gimap4 AU019574|E430007K16Rik|Ian-1|Ian1|Imap4 GTPase, IMAP family member 4 protein-coding common_peak1_29_203_-0.263768909373792_7.5405408872846_0.93583644437727 chr17 24696001 24696751 + 0.93583644437727 NA promoter-TSS (NM_023040) promoter-TSS (NM_023040) 142 NM_027988 71893 Mm.390971 NM_027988 ENSMUSG00000019320 Noxo1 2310034C04Rik|P41NOX|P41NOXA|P41NOXB|P41NOXC|Snx28|hslt NADPH oxidase organizer 1 protein-coding common_peak1_70_437_0.158372486245844_8.8539733027241_0.935452380564014 chr11 117994178 117995286 + 0.935452380564014 NA intron (NM_133757, intron 1 of 9) intron (NM_133757, intron 1 of 9) -7538 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA unique_peak2_19_129_-0.331233585397678_6.85675102032962_0.935083268254793-2 chrX 109160550 109161358 + 0.935083268254793 NA 3' UTR (NM_019989, exon 4 of 4) 3' UTR (NM_019989, exon 4 of 4) -35802 NM_001037917 622976 Mm.482747 NM_001037917 ENSMUSG00000048621 Gm6377 EG622976 predicted gene 6377 protein-coding common_peak1_23_103_0.313335749951003_6.85710759311659_0.935083268254793-3 chr9 66274393 66275006 + 0.935083268254793 NA Intergenic Intergenic -75751 NM_145617 235439 Mm.244179 NM_145617 ENSMUSG00000038664 Herc1 2810449H11Rik|B230218H07|D130015N03Rik|tbl HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding common_peak1_23_103_0.313335749951003_6.85710759311659_0.935083268254793 chr1 173430895 173431327 + 0.935083268254793 NA intron (NM_001013779, intron 2 of 8) Lx5b|LINE|L1 10507 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_23_103_0.313335749951003_6.85710759311659_0.935083268254793-2 chr17 71224145 71224634 + 0.935083268254793 NA intron (NM_022882, intron 3 of 19) intron (NM_022882, intron 3 of 19) 19735 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak2_19_129_-0.331233585397678_6.85675102032962_0.935083268254793 chr4 138303977 138304705 + 0.935083268254793 NA promoter-TSS (NM_007838) promoter-TSS (NM_007838) -397 NM_007838 13200 Mm.7236 NM_007838 ENSMUSG00000028757 Ddost - dolichyl-di-phosphooligosaccharide-protein glycotransferase protein-coding common_peak1_19_129_-0.331233585397678_6.85675102032962_0.935083268254793 chr1 106647787 106648302 + 0.935083268254793 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) 66246 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding unique_peak2_19_129_-0.331233585397678_6.85675102032962_0.935083268254793 chr8 69832184 69833151 + 0.935083268254793 NA promoter-TSS (NM_001024954) promoter-TSS (NM_001024954) -37 NM_001024954 80720 Mm.210823 NM_030555 ENSMUSG00000031860 Pbx4 2410015M21Rik|AI429113|AW045266 pre B cell leukemia homeobox 4 protein-coding common_peak1_19_129_-0.331233585397678_6.85675102032962_0.935083268254793-2 chr3 129552357 129552828 + 0.935083268254793 NA intron (NM_130450, intron 2 of 4) intron (NM_130450, intron 2 of 4) 20206 NM_130450 170439 Mm.314113 NM_130450 ENSMUSG00000041220 Elovl6 C77826|FAE|LCE ELOVL family member 6, elongation of long chain fatty acids (yeast) protein-coding unique_peak2_23_103_0.313335749951003_6.85710759311659_0.935083268254793 chr17 35218663 35219486 + 0.935083268254793 NA Intergenic Intergenic -13723 NM_010735 16992 Mm.87787 NM_010735 ENSMUSG00000024402 Lta LT|LT-[a]|LT-alpha|LT[a]|LTalpha|Ltx|TNF-beta|TNFSF1|Tnfb|Tnfsf1b|Tnlg1e|hlb382 lymphotoxin A protein-coding common_peak2_23_103_0.313335749951003_6.85710759311659_0.935083268254793 chr9 118456310 118457149 + 0.935083268254793 NA Intergenic Intergenic -21460 NM_001164789 13813 Mm.200692 NM_010136 ENSMUSG00000032446 Eomes C77258|TBR-2|Tbr2 eomesodermin protein-coding common_peak2_300_3006_-0.0648458730545833_11.5216862160467_0.93472699107014 chr9 40799309 40803135 + 0.93472699107014 NA promoter-TSS (NM_031165) promoter-TSS (NM_031165) -51 NM_031165 15481 Mm.290774 NM_031165 ENSMUSG00000015656 Hspa8 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 heat shock protein 8 protein-coding unique_peak2_48_354_-0.19479897748136_8.37427572565137_0.934622261937564 chr1 170861125 170863716 + 0.934622261937564 NA intron (NM_001081304, intron 1 of 15) intron (NM_001081304, intron 1 of 15) 5351 NM_001081304 226641 Mm.377046 NM_001081304 ENSMUSG00000026663 Atf6 9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49 activating transcription factor 6 protein-coding common_peak2_132_979_0.10726237365979_9.99026912583247_0.933842466887174 chr19 55315380 55317041 + 0.933842466887174 NA promoter-TSS (NM_025883) promoter-TSS (NM_025883) 153 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding common_peak2_127_1085_-0.108718191120126_10.0304492922443_0.932688734006 chr19 6057235 6058948 + 0.932688734006 NA promoter-TSS (NM_026246) promoter-TSS (NM_026246) 124 NM_001190436 14109 Mm.329631 NM_007990 ENSMUSG00000038274 Fau MNSFbeta Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) protein-coding common_peak1_15_59_0.389362667516649_6.10157192936684_0.932664372754135-2 chr2 166633136 166633541 + 0.932664372754135 NA intron (NM_177782, intron 5 of 39) intron (NM_177782, intron 5 of 39) -39380 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_15_59_0.389362667516649_6.10157192936684_0.932664372754135 chr2 5613973 5614428 + 0.932664372754135 NA intron (NM_177343, intron 1 of 10) intron (NM_177343, intron 1 of 10) 61846 NM_001290376 227541 Mm.191949 NM_177343 ENSMUSG00000039145 Camk1d A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK calcium/calmodulin-dependent protein kinase ID protein-coding common_peak1_15_59_0.389362667516649_6.10157192936684_0.932664372754135-4 chr7 98692661 98693020 + 0.932664372754135 NA Intergenic Intergenic -10523 NM_028410 72981 Mm.4428 NM_028410 ENSMUSG00000030753 Thap12 2900052B10Rik|Dap4|Prkrir|Rpkrir THAP domain containing 12 protein-coding common_peak1_15_59_0.389362667516649_6.10157192936684_0.932664372754135-3 chr6 48767437 48767820 + 0.932664372754135 NA 5' UTR (NM_031247, exon 3 of 5) 5' UTR (NM_031247, exon 3 of 5) 3223 NM_031247 83408 Mm.333050 NM_031247 ENSMUSG00000039264 Gimap3 2010110D23Rik|Gimap5|Ian4 GTPase, IMAP family member 3 protein-coding common_peak1_15_59_0.389362667516649_6.10157192936684_0.932664372754135-5 chrX 48447768 48448120 + 0.932664372754135 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 15188 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak2_52_387_-0.184171076744015_8.50782730381512_0.932609397911909 chr15 79670599 79671495 + 0.932609397911909 NA intron (NM_172609, intron 1 of 3) CpG 179 NM_172609 223696 Mm.246435 NM_172609 ENSMUSG00000022427 Tomm22 2310047D01|Tom22 translocase of outer mitochondrial membrane 22 homolog (yeast) protein-coding common_peak2_52_387_-0.184171076744015_8.50782730381512_0.932609397911909-2 chr9 107541375 107542832 + 0.932609397911909 NA promoter-TSS (NM_019720) promoter-TSS (NM_019720) -106 NM_018879 56032 Mm.11337 NM_018879 ENSMUSG00000010057 Nprl2 2810446G01Rik|G21|NPR2L|Tusc4 nitrogen permease regulator-like 2 protein-coding common_peak1_29_140_0.269105080198909_7.27410389249825_0.932445192133478 chr15 5694570 5695188 + 0.932445192133478 NA Intergenic Intergenic 198561 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak2_29_140_0.269105080198909_7.27410389249825_0.932445192133478 chr11 59471912 59472671 + 0.932445192133478 NA intron (NM_178417, intron 1 of 3) CpG 183 NM_178417 237775 Mm.339604 NM_178417 ENSMUSG00000054519 Zfp867 - zinc finger protein 867 protein-coding common_peak1_62_473_-0.167134088946476_8.80517620442502_0.932433381997245 chr8 120735567 120736240 + 0.932433381997245 NA promoter-TSS (NM_008320) promoter-TSS (NM_008320) -455 NM_008320 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_62_473_-0.167134088946476_8.80517620442502_0.932433381997245-2 chr9 50733174 50733905 + 0.932433381997245 NA intron (NM_001311069, intron 1 of 19) B4|SINE|B4 4196 NM_001311069 330938 Mm.82598 NM_178118 ENSMUSG00000032064 Dixdc1 4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735 DIX domain containing 1 protein-coding common_peak2_141_1227_-0.102322988336805_10.2109333512018_0.932085677527169 chr5 34660272 34661510 + 0.932085677527169 NA promoter-TSS (NM_029278) promoter-TSS (NM_029278) 512 NM_019497 14772 Mm.117076 NM_019497 ENSMUSG00000052783 Grk4 A830025H08Rik|GRK|Gprk2l|Gprk4 G protein-coupled receptor kinase 4 protein-coding common_peak1_48_269_0.200060639859853_8.17684591698076_0.931997496195806 chr17 56507310 56507813 + 0.931997496195806 NA Intergenic Intergenic 4922 NM_011483 20834 Mm.76862 NM_011483 ENSMUSG00000044526 Znrf4 1700094M01Rik|Ssrzf1|spzn zinc and ring finger 4 protein-coding common_peak1_48_269_0.200060639859853_8.17684591698076_0.931997496195806-2 chr7 75686127 75686814 + 0.931997496195806 NA intron (NM_029332, intron 13 of 36) intron (NM_029332, intron 13 of 36) -161868 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_119_1006_-0.113966913036368_9.9188645114886_0.931777861736006 chr15 85634680 85635579 + 0.931777861736006 NA Intergenic Intergenic -53308 NM_009528 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak2_713_8076_0.0382153735048227_12.9987115108269_0.931452141235334 chr8 83734862 83743435 + 0.931452141235334 NA intron (NM_011925, intron 1 of 19) ID_B1|SINE|B4 2163 NM_001163029 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak1_246_2143_0.0732799280139513_11.1027291544647_0.931413750241394 chr2 166490964 166493385 + 0.931413750241394 NA Intergenic ORR1E|LTR|ERVL-MaLR 44723 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak1_144_1258_-0.101293666328127_10.247415734555_0.931168039219481 chr9 65216521 65218788 + 0.931168039219481 NA intron (NM_177460, intron 2 of 6) intron (NM_177460, intron 2 of 6) 2964 NM_177460 214424 Mm.31129 NM_177460 ENSMUSG00000032392 Parp16 ARTD15|BC055447|C79952|PARP-16 poly (ADP-ribose) polymerase family, member 16 protein-coding common_peak1_60_456_-0.171530904011098_8.75028490305252_0.931161004436677 chr2 132686754 132687579 + 0.931161004436677 NA Intergenic CpG -3117 NM_028637 73747 Mm.284114 NM_028637 ENSMUSG00000044991 1110034G24Rik - RIKEN cDNA 1110034G24 gene protein-coding common_peak1_77_494_0.148271045827245_9.0254202378806_0.931111655706774 chr4 130360126 130360926 + 0.931111655706774 NA promoter-TSS (NM_153160) promoter-TSS (NM_153160) 394 NM_025645 66585 Mm.423019 NM_025645 ENSMUSG00000074088 Snrnp40 0610009C03Rik|Prp8bp|Wdr57 small nuclear ribonucleoprotein 40 (U5) protein-coding common_peak1_19_80_0.351284224746152_6.5154921152577_0.930402885492151 chr9 21852079 21852509 + 0.930402885492151 NA intron (NM_177030, intron 1 of 49) intron (NM_177030, intron 1 of 49) 341 NM_177030 319899 Mm.128153 NM_177030 ENSMUSG00000032198 Dock6 2410095B20Rik|4931431C02Rik|C330023D02Rik|mKIAA1395 dedicator of cytokinesis 6 protein-coding unique_peak2_19_80_0.351284224746152_6.5154921152577_0.930402885492151-2 chr2 70660862 70661412 + 0.930402885492151 NA promoter-TSS (NM_027352) promoter-TSS (NM_027352) -372 NR_027343 70231 Mm.271950 NM_027352 ENSMUSG00000014959 Gorasp2 0610011A07Rik|2410043M02Rik|5730520M13Rik|9430094F20Rik|AW552058|ENSMUSG00000075299|GOLPH2|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding common_peak2_19_80_0.351284224746152_6.5154921152577_0.930402885492151 chr13 48625664 48626243 + 0.930402885492151 NA promoter-TSS (NM_001301781) promoter-TSS (NM_001301781) -281 NM_001301781 218232 Mm.315089 NM_207232 ENSMUSG00000038042 Ptpdc1 AI843923|AW456874|Naa-1|Ptpcd1 protein tyrosine phosphatase domain containing 1 protein-coding unique_peak2_19_80_0.351284224746152_6.5154921152577_0.930402885492151 chr10 108189844 108190561 + 0.930402885492151 NA intron (NM_027892, intron 1 of 25) ID4_|SINE|ID 27802 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak2_58_439_-0.175833308482835_8.69344305928324_0.930311701553667 chr6 142345190 142346378 + 0.930311701553667 NA promoter-TSS (NM_183165) promoter-TSS (NM_183165) 87 NM_183165 232491 Mm.490474 NM_183165 ENSMUSG00000041671 Pyroxd1 - pyridine nucleotide-disulphide oxidoreductase domain 1 protein-coding common_peak1_84_552_0.140506177617784_9.1813887590436_0.929934421185446 chr19 5294719 5295502 + 0.929934421185446 NA intron (NM_030109, intron 1 of 20) intron (NM_030109, intron 1 of 20) 345 NM_030109 319322 Mm.196532 NM_030109 ENSMUSG00000024853 Sf3b2 145kDa|2610311M13Rik|2810441F20Rik|B230398H18Rik|SAP145|SF3b1|SF3b145|SF3b150 splicing factor 3b, subunit 2 protein-coding common_peak1_52_298_0.191740091245007_8.31987171982061_0.929838792896107 chr3 52572149 52573281 + 0.929838792896107 NA Intergenic RLTR14|LTR|ERV1 -167009 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak1_50_284_0.192852668075352_8.25124444308978_0.929474189631492 chr2 65336789 65337770 + 0.929474189631492 NA intron (NM_177074, intron 7 of 11) MIRb|SINE|MIR 26747 NM_177074 320106 Mm.227703 NM_177074 ENSMUSG00000061171 Slc38a11 9330158F14Rik solute carrier family 38, member 11 protein-coding unique_peak2_50_284_0.192852668075352_8.25124444308978_0.929474189631492 chr11 52075229 52077172 + 0.929474189631492 NA intron (NM_001166654, intron 13 of 13) intron (NM_001166654, intron 13 of 13) -22624 NM_019411 19052 Mm.260288 NM_019411 ENSMUSG00000020349 Ppp2ca PP2A|R75353 protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform protein-coding common_peak1_34_172_0.246817486886809_7.55803697108013_0.929083717928937 chr13 101538070 101538874 + 0.929083717928937 NA Intergenic Intergenic -140892 NR_046187 78136 Mm.399065 NR_046187 4922502H24Rik - RIKEN cDNA 4922502H24 gene ncRNA common_peak2_34_172_0.246817486886809_7.55803697108013_0.929083717928937 chr2 128154654 128155748 + 0.929083717928937 NA intron (NM_009754, intron 3 of 3) intron (NM_009754, intron 3 of 3) 27626 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding unique_peak2_34_172_0.246817486886809_7.55803697108013_0.929083717928937 chr7 135576633 135577984 + 0.929083717928937 NA intron (NM_001316678, intron 1 of 19) intron (NM_001316678, intron 1 of 19) 11146 NR_035488 100316818 NR_035488 ENSMUSG00000088141 Mir1962 mir-1962|mmu-mir-1962 microRNA 1962 ncRNA common_peak1_54_313_0.186670269494288_8.38795588363877_0.928940085068871 chr11 55021115 55022241 + 0.928940085068871 NA intron (NM_013472, intron 1 of 25) MER76|LTR|ERVL 11793 NM_001110211 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak1_56_328_0.182554945814932_8.45322124664271_0.928741363558311-2 chr2 150786690 150787639 + 0.928741363558311 NA intron (NM_153781, intron 1 of 19) CpG 368 NM_153781 110078 Mm.222584 NM_153781 ENSMUSG00000033059 Pygb - brain glycogen phosphorylase protein-coding common_peak1_56_328_0.182554945814932_8.45322124664271_0.928741363558311 chr15 66851671 66852946 + 0.928741363558311 NA Intergenic Intergenic -20479 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding unique_peak2_14_95_-0.402918379309808_6.38350331106625_0.92842122850166 chr2 3283320 3283934 + 0.92842122850166 NA promoter-TSS (NM_001290369) promoter-TSS (NM_001290369) -585 NM_008708 18108 Mm.65021 NM_008708 ENSMUSG00000026643 Nmt2 A930001K02Rik|AI605445|AU044698|hNMT-2 N-myristoyltransferase 2 protein-coding unique_peak2_14_95_-0.402918379309808_6.38350331106625_0.92842122850166-3 chrX 73213516 73214261 + 0.92842122850166 NA promoter-TSS (NM_001293676) promoter-TSS (NM_001293676) -445 NM_001293677 27083 Mm.104764 NM_021365 ENSMUSG00000067768 Xlr4b Xlr4 X-linked lymphocyte-regulated 4B protein-coding unique_peak2_14_95_-0.402918379309808_6.38350331106625_0.92842122850166-2 chr5 105408705 105409324 + 0.92842122850166 NA Intergenic PB1D9|SINE|Alu -6761 NM_001033550 433926 Mm.439781 NM_001033550 ENSMUSG00000070639 Lrrc8b R75581|Ta-lrrp|mKIAA0231 leucine rich repeat containing 8 family, member B protein-coding common_peak1_94_764_-0.130846147304803_9.51389286392761_0.928336328796538 chr16 96082666 96083697 + 0.928336328796538 NA promoter-TSS (NM_001103179) promoter-TSS (NM_001103179) -753 NM_145125 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding common_peak2_133_988_0.10732930057697_10.0034913610476_0.928291568683645 chr4 33030633 33032305 + 0.928291568683645 NA promoter-TSS (NM_019586) promoter-TSS (NM_019586) 44 NM_019586 56228 Mm.259095 NM_019586 ENSMUSG00000028277 Ube2j1 0710008M05Rik|1110030I22Rik|NCUBE-1|Ncube|Ncube1|Ubc6p ubiquitin-conjugating enzyme E2J 1 protein-coding common_peak1_247_2154_0.0730469843169139_11.1099956461349_0.928276118138499 chr15 76311239 76313665 + 0.928276118138499 NA Intergenic RLTR14_RN|LTR|ERV1 -5207 NM_153122 75475 Mm.322738 NM_153122 ENSMUSG00000022562 Oplah 1700010G02Rik 5-oxoprolinase (ATP-hydrolysing) protein-coding common_peak2_187_1712_-0.0859537262852683_10.6993325729414_0.9281448386525 chr12 85471888 85475319 + 0.9281448386525 NA promoter-TSS (NM_010234) promoter-TSS (NM_010234) -298 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak1_117_986_-0.114767558228216_9.88952249534229_0.927689496211498 chr14 64733953 64735511 + 0.927689496211498 NA intron (NM_001081177, intron 10 of 39) MLTR25A|LTR|ERVK 82201 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak1_71_552_-0.153225685989328_9.03452282724004_0.927504439122219 chr13 6632878 6633711 + 0.927504439122219 NA intron (NM_001291071, intron 2 of 21) intron (NM_001291071, intron 2 of 21) 15477 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding common_peak2_223_1895_0.0776584346787352_10.9275724662376_0.927356357019068 chr11 49810064 49813453 + 0.927356357019068 NA exon (NM_013529, exon 6 of 19) exon (NM_013529, exon 6 of 19) 17603 NM_013529 14584 Mm.24402 NM_013529 ENSMUSG00000020363 Gfpt2 AI480523|GFAT2 glutamine fructose-6-phosphate transaminase 2 protein-coding common_peak1_82_535_0.143416678710576_9.13779752981306_0.927305486334321 chr17 27133290 27134276 + 0.927305486334321 NA exon (NM_026063, exon 1 of 4) exon (NM_026063, exon 1 of 4) 108 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding common_peak1_87_698_-0.136126280308773_9.38108550522105_0.926978094345577 chr9 106371969 106373228 + 0.926978094345577 NA intron (NM_153459, intron 2 of 2) intron (NM_153459, intron 2 of 2) 3966 NM_153459 235584 Mm.275584 NM_153459 ENSMUSG00000053716 Dusp7 AU015694|Mkpx|Pyst2 dual specificity phosphatase 7 protein-coding common_peak1_484_4990_0.0483307617402371_12.3092785693716_0.926574554506794 chr4 122883942 122887416 + 0.926574554506794 NA intron (NM_007598, intron 1 of 12) intron (NM_007598, intron 1 of 12) 378 NM_007598 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak1_31_218_-0.25192148528965_7.64882631695635_0.926209952186054 chr15 100443083 100443493 + 0.926209952186054 NA Intergenic ERVL-E-int|LTR|ERVL 20095 NR_040351 432982 Mm.234608 NM_001034883 ENSMUSG00000087444 Gm5475 EG432982 predicted gene 5475 ncRNA unique_peak2_31_218_-0.25192148528965_7.64882631695635_0.926209952186054 chr10 96599068 96600449 + 0.926209952186054 NA Intergenic B3A|SINE|B2 -17243 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_139_1045_0.104003200649304_10.0826687365716_0.925979615184259 chr17 79346703 79348965 + 0.925979615184259 NA intron (NM_026514, intron 1 of 1) intron (NM_026514, intron 1 of 1) 7257 NM_026514 260409 Mm.140601 NM_026514 ENSMUSG00000036533 Cdc42ep3 3200001F04Rik|AA986861|Borg2|Cep3|UB1 CDC42 effector protein (Rho GTPase binding) 3 protein-coding common_peak1_69_534_-0.15533705557862_8.9857265534992_0.925784425192384 chr19 7382290 7383188 + 0.925784425192384 NA promoter-TSS (NR_045703) promoter-TSS (NR_045703) -264 NR_045703 654802 Mm.414924 NR_045703 1700105P06Rik - RIKEN cDNA 1700105P06 gene ncRNA common_peak1_43_313_-0.208210695011321_8.19051540138597_0.92551535035769 chr2 160872381 160873230 + 0.92551535035769 NA 5' UTR (NM_177263, exon 1 of 4) 5' UTR (NM_177263, exon 1 of 4) 185 NM_177263 320799 Mm.436734 NM_177263 ENSMUSG00000035877 Zhx3 1810059C13Rik|4932418O04Rik|9530010N21Rik|Tix1|mKIAA0395 zinc fingers and homeoboxes 3 protein-coding common_peak2_92_745_-0.132215099367647_9.47692427057141_0.924966836988006 chr12 21456138 21458468 + 0.924966836988006 NA Intergenic Intergenic -39867 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak1_41_220_0.216184395593423_7.89599475718814_0.924873602276602 chr5 114443700 114444291 + 0.924873602276602 NA promoter-TSS (NM_001306205) promoter-TSS (NM_001306205) 32 NM_029956 77697 Mm.105182 NM_029956 ENSMUSG00000029575 Mmab 9130222L19Rik|ATR methylmalonic aciduria (cobalamin deficiency) cblB type homolog (human) protein-coding common_peak2_36_257_-0.231443604211844_7.89550545331733_0.924873602276602 chr13 101654369 101655776 + 0.924873602276602 NA Intergenic Intergenic 37558 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_41_220_0.216184395593423_7.89599475718814_0.924873602276602 chr2 144458735 144459663 + 0.924873602276602 NA promoter-TSS (NR_033459) promoter-TSS (NR_033459) -81 NR_033459 668917 Mm.152805 NR_033459 ENSMUSG00000083674 Zfp133-ps OTTMUSG00000003825|Zfp133 zinc finger protein 133, pseudogene pseudo common_peak2_410_4370_-0.0532755900975239_12.0671098677369_0.924676840335838 chr18 65800030 65804145 + 0.924676840335838 NA intron (NM_025468, intron 1 of 5) intron (NM_025468, intron 1 of 5) 1509 NM_025468 66286 Mm.27800 NM_025468 ENSMUSG00000024516 Sec11c 1810029G24Rik|Sec11l3 SEC11 homolog C, signal peptidase complex subunit protein-coding common_peak1_339_3201_0.0601088777089487_11.6748120313707_0.924356924382201 chr2 32718400 32722723 + 0.924356924382201 NA promoter-TSS (NM_013781) promoter-TSS (NM_013781) -494 NR_045535 27387 Mm.9593 NM_013781 ENSMUSG00000059013 Sh2d3c Chat|Nsp3|Shep1 SH2 domain containing 3C protein-coding common_peak2_185_1690_-0.0862319123360376_10.680544988242_0.923459408399825 chr9 123850259 123852845 + 0.923459408399825 NA TTS (NM_011798) TTS (NM_011798) 109 NM_148925 17281 Mm.252941 NM_148925 ENSMUSG00000025241 Fyco1 2810409M01Rik|Mem2|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding common_peak2_22_151_-0.309466709350075_7.09319415876855_0.923442343123051 chrX 9662243 9663086 + 0.923442343123051 NA intron (NM_025975, intron 1 of 4) intron (NM_025975, intron 1 of 4) 319 NM_025975 67117 Mm.29150 NM_025975 ENSMUSG00000031176 Dynlt3 2310075M16Rik|AU042796|Tcte1l dynein light chain Tctex-type 3 protein-coding common_peak2_45_329_-0.201249098965951_8.26569766476284_0.923343419587784 chr4 33110465 33112059 + 0.923343419587784 NA Intergenic Intergenic -21294 NM_008075 14408 Mm.14116 NM_008075 ENSMUSG00000028280 Gabrr1 GABA-C gamma-aminobutyric acid (GABA) C receptor, subunit rho 1 protein-coding common_peak1_160_1248_0.0954391517510214_10.3342773374835_0.923151636507489 chr8 86623964 86625543 + 0.923151636507489 NA intron (NM_025827, intron 1 of 14) intron (NM_025827, intron 1 of 14) 710 NM_025827 66887 Mm.324550 NM_025827 ENSMUSG00000047866 Lonp2 1300002A08Rik|AU015403|Lonp lon peptidase 2, peroxisomal protein-coding common_peak1_157_1219_0.096045969849424_10.300688417375_0.92298232911177 chr5 115525181 115527456 + 0.92298232911177 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 19642 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding unique_peak2_28_195_-0.26604652960264_7.48168657931389_0.922973638398431 chr19 43529696 43530989 + 0.922973638398431 NA Intergenic Intergenic -5737 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_28_195_-0.26604652960264_7.48168657931389_0.922973638398431 chrX 48435788 48436445 + 0.922973638398431 NA intron (NM_019680, intron 1 of 8) B1_Mur3|SINE|Alu 27016 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak1_69_429_0.15986517612043_8.82812543764967_0.922698492983138 chr15 11398992 11399778 + 0.922698492983138 NA intron (NM_033074, intron 1 of 18) intron (NM_033074, intron 1 of 18) 273 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak2_92_620_0.132367262667108_9.34463308955404_0.922322229404168 chr17 35896598 35898240 + 0.922322229404168 NA promoter-TSS (NM_001033630) promoter-TSS (NM_001033630) -41 NM_001033630 69662 Mm.260159 NM_001033630 ENSMUSG00000050705 2310061I04Rik - RIKEN cDNA 2310061I04 gene protein-coding common_peak1_47_345_-0.194240448358274_8.33750800345759_0.922052170949557 chr4 156077384 156078386 + 0.922052170949557 NA Intergenic CpG -18083 NR_132444 100415901 Mm.437006 NR_132444 ENSMUSG00000086549 Gm13648 OTTMUSG00000013217 predicted gene 13648 ncRNA common_peak2_76_597_-0.147280133425038_9.15036160748559_0.921792704292551-2 chr2 166792910 166794640 + 0.921792704292551 NA promoter-TSS (NM_023815) promoter-TSS (NM_023815) 8 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding common_peak2_76_597_-0.147280133425038_9.15036160748559_0.921792704292551 chr10 96327465 96329613 + 0.921792704292551 NA Intergenic ORR1E|LTR|ERVL-MaLR 102332 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_97_663_0.128449116750115_9.43926398972198_0.921730604017776 chr5 72167348 72168299 + 0.921730604017776 NA intron (NM_178599, intron 1 of 4) CpG 360 NM_178599 27784 Mm.44223 NM_178599 ENSMUSG00000029213 Commd8 C77770|D5Buc26e COMM domain containing 8 protein-coding common_peak1_123_896_0.110942652187758_9.86443550101314_0.921659118567666 chr7 16815853 16817201 + 0.921659118567666 NA exon (NM_133789, exon 1 of 18) exon (NM_133789, exon 1 of 18) 205 NM_173430 243853 Mm.39703 NM_173430 ENSMUSG00000048920 Fkrp A830029B19Rik|AI842067|AI847300|LGMD1I|MDC1C fukutin related protein protein-coding common_peak2_143_1247_-0.100879923430513_10.234962257147_0.921611894569052 chr11 115419046 115421113 + 0.921611894569052 NA promoter-TSS (NM_027862) promoter-TSS (NM_027862) -47 NM_183285 70382 Mm.276299 NM_183285 ENSMUSG00000016940 Kctd2 2310012I15Rik potassium channel tetramerisation domain containing 2 protein-coding common_peak1_78_502_0.14768450130779_9.04825684045942_0.9215833685599 chr3 52198404 52199637 + 0.9215833685599 NA Intergenic Intergenic -69317 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak2_78_502_0.14768450130779_9.04825684045942_0.9215833685599 chr15 85645463 85646920 + 0.9215833685599 NA Intergenic CpG -57582 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_85_560_0.140482520831512_9.20209822102455_0.921385464818238 chr10 21157878 21160264 + 0.921385464818238 NA intron (NM_001198914, intron 1 of 15) CpG 1913 NM_001198914 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding common_peak1_63_481_-0.163411450732081_8.83118361086392_0.921332258184555 chr16 17014721 17015844 + 0.921332258184555 NA intron (NM_011949, intron 1 of 8) B3|SINE|B2 31900 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak2_115_823_0.115387409702063_9.74419423203425_0.921261214455302 chr17 24886504 24887702 + 0.921261214455302 NA promoter-TSS (NM_027141) promoter-TSS (NM_027141) -378 NM_027141 79043 Mm.274794 NM_027141 ENSMUSG00000024160 Spsb3 2310012N15Rik|3300001M01Rik|SSB3|Tce1|mKIAA4204 splA/ryanodine receptor domain and SOCS box containing 3 protein-coding unique_peak2_31_153_0.256079033616623_7.39482605750321_0.9211302896319 chr1 153634466 153635330 + 0.9211302896319 NA Intergenic Intergenic -18139 NM_026380 67792 Mm.379143 NM_026380 ENSMUSG00000042671 Rgs8 6530413N01Rik regulator of G-protein signaling 8 protein-coding common_peak1_137_1027_0.103583082239272_10.0574160903135_0.920832383156939 chr11 120632328 120633779 + 0.920832383156939 NA intron (NM_010756, intron 1 of 2) CpG 494 NM_010756 17134 Mm.268010 NM_010756 ENSMUSG00000051510 Mafg AA545192|C630022N07Rik v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) protein-coding common_peak1_13_88_-0.415780992134827_6.26784293489898_0.920753037356072 chr11 98955123 98955532 + 0.920753037356072 NA intron (NM_001177302, intron 3 of 9) intron (NM_001177302, intron 3 of 9) -5144 NM_001176528 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding unique_peak2_13_88_-0.415780992134827_6.26784293489898_0.920753037356072 chr7 89235676 89236485 + 0.920753037356072 NA intron (NM_028343, intron 5 of 14) intron (NM_028343, intron 5 of 14) 102707 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding common_peak1_14_54_0.400684407886688_5.981701917468_0.920598702816666 chr10 80666186 80666534 + 0.920598702816666 NA 3' UTR (NM_021462, exon 14 of 14) 3' UTR (NM_021462, exon 14 of 14) -9289 NM_145361 208198 Mm.60720 NM_145361 ENSMUSG00000003344 Btbd2 2610037C03Rik|4930512K17Rik BTB (POZ) domain containing 2 protein-coding common_peak1_14_54_0.400684407886688_5.981701917468_0.920598702816666-4 chr4 140773875 140774228 + 0.920598702816666 NA intron (NM_011061, intron 1 of 15) intron (NM_011061, intron 1 of 15) 152 NM_011061 18602 Mm.250358 NM_011061 ENSMUSG00000025330 Padi4 Pad4|Pdi4 peptidyl arginine deiminase, type IV protein-coding common_peak1_14_54_0.400684407886688_5.981701917468_0.920598702816666-2 chr11 119643098 119643548 + 0.920598702816666 NA intron (NM_028898, intron 1 of 33) intron (NM_028898, intron 1 of 33) 40418 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak1_14_54_0.400684407886688_5.981701917468_0.920598702816666-3 chr14 7818030 7818337 + 0.920598702816666 NA exon (NM_001081427, exon 1 of 46) exon (NM_001081427, exon 1 of 46) 226 NM_134080 286940 Mm.489652 NM_134080 ENSMUSG00000025278 Flnb AL024016|Fln-b filamin, beta protein-coding common_peak1_25_173_-0.287522251207796_7.29918237024483_0.920419716851829 chr6 136465646 136466315 + 0.920419716851829 NA Intergenic Intergenic -50411 NM_001201390 100502936 Mm.21182 NM_001201390 ENSMUSG00000045291 E330021D16Rik C85549 RIKEN cDNA E330021D16 gene protein-coding common_peak1_158_1402_-0.0944230120235012_10.4070877876081_0.92027984062852 chr12 69422295 69423813 + 0.92027984062852 NA Intergenic Intergenic 50904 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak2_161_1434_-0.0938806273838146_10.4398947078711_0.920071896510473 chr11 5954747 5956564 + 0.920071896510473 NA promoter-TSS (NM_019661) promoter-TSS (NM_019661) -103 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding unique_peak2_36_186_0.232889191323774_7.66333905554952_0.920036008317388 chr9 101097451 101098095 + 0.920036008317388 NA intron (NM_001100451, intron 1 of 1) intron (NM_001100451, intron 1 of 1) 23011 NM_001100451 77853 Mm.326206 NM_001100451 ENSMUSG00000066415 Msl2 E130103E02Rik|Msl2l1|Rnf184 male-specific lethal 2 homolog (Drosophila) protein-coding common_peak1_36_186_0.232889191323774_7.66333905554952_0.920036008317388 chr19 34526709 34527557 + 0.920036008317388 NA intron (NM_021460, intron 1 of 9) intron (NM_021460, intron 1 of 9) 341 NM_001111100 16889 Mm.157545 NM_021460 ENSMUSG00000024781 Lipa AA960673|Lal|Lip-1|Lip1 lysosomal acid lipase A protein-coding common_peak2_36_186_0.232889191323774_7.66333905554952_0.920036008317388 chr12 51970647 51971521 + 0.920036008317388 NA intron (NM_177171, intron 1 of 35) CpG 237 NM_177171 320487 Mm.131941 NM_177171 ENSMUSG00000035181 Heatr5a C230081H03Rik|D930036F22Rik|mKIAA1316 HEAT repeat containing 5A protein-coding common_peak1_61_464_-0.167792390074732_8.77719071095803_0.919665424598264 chr12 100520052 100520788 + 0.919665424598264 NA intron (NM_001033213, intron 1 of 19) CpG 402 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak2_61_464_-0.167792390074732_8.77719071095803_0.919665424598264 chr10 96203372 96205384 + 0.919665424598264 NA Intergenic RLTR18B|LTR|ERVK -21829 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_143_1084_0.101042968099893_10.1340008113818_0.919373336496985 chr4 143212059 143213488 + 0.919373336496985 NA promoter-TSS (NM_001256380) promoter-TSS (NM_001256380) -64 NM_001256380 110593 Mm.332020 NM_001081355 ENSMUSG00000057637 Prdm2 4833427P12Rik|E330024L24Rik|Gm1033|Gm19732|KMT8|Riz|Riz1|Znfpr1c1 PR domain containing 2, with ZNF domain protein-coding common_peak2_143_1084_0.101042968099893_10.1340008113818_0.919373336496985 chr11 75732328 75734316 + 0.919373336496985 NA intron (NM_009536, intron 1 of 5) CpG 435 NM_009536 22627 Mm.234700 NM_009536 ENSMUSG00000020849 Ywhae AU019196 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide protein-coding common_peak1_57_429_-0.172917223890535_8.66173423764419_0.919055271440247 chr14 14120238 14121163 + 0.919055271440247 NA intron (NM_025550, intron 1 of 7) CpG 204 NM_025550 66413 Mm.27591 NM_025550 ENSMUSG00000021737 Psmd6 2400006A19Rik proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 protein-coding common_peak2_57_429_-0.172917223890535_8.66173423764419_0.919055271440247 chr5 120115690 120117282 + 0.919055271440247 NA promoter-TSS (NM_028762) promoter-TSS (NM_028762) -27 NM_028762 74111 Mm.41022 NM_028762 ENSMUSG00000029594 Rbm19 1200009A02Rik|AV302714|NPO RNA binding motif protein 19 protein-coding common_peak1_53_395_-0.180536742053659_8.53908824905278_0.919009504737793 chr15 64021348 64022438 + 0.919009504737793 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 38555 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_33_233_-0.240216147422878_7.75025664587197_0.918891958410164 chr9 22389270 22389791 + 0.918891958410164 NA promoter-TSS (NM_028390) promoter-TSS (NM_028390) -324 NM_028390 68743 Mm.282751 NM_028390 ENSMUSG00000036777 Anln 1110037A17Rik|2900037I21Rik|C78101|Scraps anillin, actin binding protein protein-coding common_peak1_55_412_-0.176820910215165_8.60158751631186_0.918753550532042 chr2 78995885 78996831 + 0.918753550532042 NA Intergenic Intergenic 127311 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_55_412_-0.176820910215165_8.60158751631186_0.918753550532042-2 chr7 98178353 98179016 + 0.918753550532042 NA promoter-TSS (NM_007602) promoter-TSS (NM_007602) -410 NM_007602 12337 Mm.326847 NM_007602 ENSMUSG00000035547 Capn5 nCL-3 calpain 5 protein-coding common_peak2_90_603_0.133940303394969_9.30537489102256_0.918741666568713 chr19 44106744 44108255 + 0.918741666568713 NA promoter-TSS (NM_001162410) promoter-TSS (NM_001162410) -22 NM_001162410 12675 Mm.3996 NM_007700 ENSMUSG00000025199 Chuk AI256658|Chuk1|Fbx24|Fbxo24|IKBKA|IKK1|Ikka|NFKBIKA conserved helix-loop-helix ubiquitous kinase protein-coding common_peak1_59_447_-0.172086178273544_8.72131183292083_0.91838279454141 chr13 59556507 59557501 + 0.91838279454141 NA promoter-TSS (NM_001284219) promoter-TSS (NM_001284219) -82 NM_001284219 67269 Mm.153008 NM_023328 ENSMUSG00000021557 Agtpbp1 1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd ATP/GTP binding protein 1 protein-coding common_peak2_186_1509_0.0865848398895821_10.6036252541572_0.917676812500536 chr17 21678787 21680820 + 0.917676812500536 NA Intergenic Intergenic -10409 NR_045766 100310809 Mm.293030 NR_045766 Gm10509 ENSMUSG00000073448 zinc finger protein 51 pseudogene pseudo common_peak1_132_980_0.105790986443122_9.9910048194408_0.917205781672143 chr4 33030649 33032218 + 0.917205781672143 NA promoter-TSS (NM_019586) promoter-TSS (NM_019586) 8 NM_019586 56228 Mm.259095 NM_019586 ENSMUSG00000028277 Ube2j1 0710008M05Rik|1110030I22Rik|NCUBE-1|Ncube|Ncube1|Ubc6p ubiquitin-conjugating enzyme E2J 1 protein-coding common_peak2_72_561_-0.152107293835298_9.05837267330328_0.91692652886708 chr11 120783610 120785070 + 0.91692652886708 NA promoter-TSS (NM_001177874) promoter-TSS (NM_001177874) 68 NM_001177874 209318 Mm.30195 NM_145370 ENSMUSG00000025156 Gps1 Cops1|Csn1|R75577|Sgn1 G protein pathway suppressor 1 protein-coding common_peak2_28_134_0.271847717461737_7.2127394557817_0.916895759383658 chr3 58469673 58470645 + 0.916895759383658 NA Intergenic Intergenic 54470 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak1_40_288_-0.213482417435253_8.06818447378305_0.9166201480572 chr16 10545256 10545907 + 0.9166201480572 NA exon (NM_177562, exon 1 of 23) exon (NM_177562, exon 1 of 23) 242 NM_001204229 74374 Mm.159176 NM_177562 ENSMUSG00000068663 Clec16a 4932416N17Rik|curt|mKIAA0350 C-type lectin domain family 16, member A protein-coding common_peak2_144_1257_-0.100147305488399_10.2468425541351_0.916504332115914 chrX 74428178 74430455 + 0.916504332115914 NA promoter-TSS (NM_010547) promoter-TSS (NM_010547) 1 NM_001161422 16151 Mm.12967 NM_010547 ENSMUSG00000004221 Ikbkg 1110037D23Rik|AI848108|AI851264|AW124339|IKK[g]|NEMO inhibitor of kappaB kinase gamma protein-coding common_peak1_22_98_0.309104184013901_6.78390871208656_0.916450677904792-3 chr7 58828178 58828806 + 0.916450677904792 NA exon (NM_009728, exon 21 of 21) exon (NM_009728, exon 21 of 21) 170290 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_22_98_0.309104184013901_6.78390871208656_0.916450677904792 chr16 38549677 38550415 + 0.916450677904792 NA intron (NM_001300827, intron 1 of 10) CpG 210 NM_172380 224143 Mm.284366 NM_172380 ENSMUSG00000034064 Poglut1 9630046K23Rik|Clp46|Ktelc1|Rumi protein O-glucosyltransferase 1 protein-coding common_peak1_22_98_0.309104184013901_6.78390871208656_0.916450677904792 chr17 35210401 35210909 + 0.916450677904792 NA Intergenic Intergenic -5304 NM_010735 16992 Mm.87787 NM_010735 ENSMUSG00000024402 Lta LT|LT-[a]|LT-alpha|LT[a]|LTalpha|Ltx|TNF-beta|TNFSF1|Tnfb|Tnfsf1b|Tnlg1e|hlb382 lymphotoxin A protein-coding common_peak1_22_98_0.309104184013901_6.78390871208656_0.916450677904792-2 chr2 129175501 129175836 + 0.916450677904792 NA Intergenic Intergenic 5005 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 OTTMUSG00000015420 expressed sequence AI847159 ncRNA unique_peak2_22_98_0.309104184013901_6.78390871208656_0.916450677904792 chr2 48618586 48619634 + 0.916450677904792 NA Intergenic Intergenic -194999 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding common_peak1_22_98_0.309104184013901_6.78390871208656_0.916450677904792-4 chrX 107178371 107178929 + 0.916450677904792 NA Intergenic Intergenic 29035 NM_175442 213438 Mm.265244 NM_175442 ENSMUSG00000054293 A630033H20Rik AI662791|P2ry10 RIKEN cDNA A630033H20 gene protein-coding common_peak1_168_1507_-0.0906068647392537_10.513117280899_0.916318018754259 chr6 122281689 122283747 + 0.916318018754259 NA intron (NM_016970, intron 1 of 4) intron (NM_016970, intron 1 of 4) 115 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak2_150_1318_-0.0967084642659923_10.3168746171185_0.916153183475262 chr13 65277817 65279572 + 0.916153183475262 NA promoter-TSS (NM_178364) promoter-TSS (NM_178364) -160 NM_178364 170936 Mm.151546 NM_178364 ENSMUSG00000021514 Zfp369 B930030B22Rik|D230020H11Rik|NRIF2 zinc finger protein 369 protein-coding common_peak1_79_624_-0.14335352954596_9.21603561477647_0.915124793085004 chr2 32259391 32260116 + 0.915124793085004 NA intron (NM_011675, intron 1 of 6) intron (NM_011675, intron 1 of 6) 352 NM_011675 22245 Mm.425076 NM_011675 ENSMUSG00000002550 Uck1 URK1|Umpk uridine-cytidine kinase 1 protein-coding common_peak2_70_543_-0.154303295403322_9.01031119354868_0.914877494575996 chr17 28621268 28622995 + 0.914877494575996 NA intron (NM_016795, intron 1 of 15) CpG-6184 323 NM_016795 20815 Mm.15252 NM_016795 ENSMUSG00000004865 Srpk1 AU017960 serine/arginine-rich protein specific kinase 1 protein-coding common_peak1_116_832_0.114905280395597_9.75962532556335_0.914819308629114 chr19 46003497 46004546 + 0.914819308629114 NA exon (NM_176785, exon 1 of 1) exon (NM_176785, exon 1 of 1) 543 NM_176785 20170 Mm.101110 NM_176785 ENSMUSG00000074811 Hps6 5330434M19Rik|BLOC2|ru Hermansky-Pudlak syndrome 6 protein-coding unique_peak2_12_81_-0.428743071163507_6.14318046903633_0.914750942382696 chr13 75844253 75844943 + 0.914750942382696 NA intron (NM_053108, intron 1 of 2) intron (NM_053108, intron 1 of 2) 4712 NM_053108 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding unique_peak2_12_81_-0.428743071163507_6.14318046903633_0.914750942382696-2 chr9 40450276 40450911 + 0.914750942382696 NA intron (NM_172768, intron 1 of 19) intron (NM_172768, intron 1 of 19) 5171 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding common_peak2_147_1122_0.0998660611835227_10.1830752429924_0.913929518267097 chr2 5844302 5845894 + 0.913929518267097 NA promoter-TSS (NM_016918) promoter-TSS (NM_016918) 64 NM_016918 53893 Mm.251904 NM_016918 ENSMUSG00000025817 Nudt5 - nudix (nucleoside diphosphate linked moiety X)-type motif 5 protein-coding common_peak2_93_629_0.130535380225096_9.36447570849983_0.913837544580028 chr4 152296377 152298017 + 0.913837544580028 NA promoter-TSS (NM_133788) promoter-TSS (NM_133788) -17 NR_037908 57295 Mm.277464 NM_133788 ENSMUSG00000039662 Icmt 1700008E11Rik|C80758|Gm13095|HSTE14|OTTMUSG00000010406|PPMT|STE14|pcCMT isoprenylcysteine carboxyl methyltransferase protein-coding common_peak1_98_672_0.126991769203848_9.45795857921224_0.913784523251955 chr15 58822531 58823643 + 0.913784523251955 NA exon (NM_175212, exon 1 of 7) exon (NM_175212, exon 1 of 7) 340 NM_175212 74868 Mm.293754 NM_175212 ENSMUSG00000062373 Tmem65 2610029O13Rik|4930438D12Rik transmembrane protein 65 protein-coding common_peak1_18_75_0.352436689953305_6.42414585842024_0.913749359973624-2 chr3 36150924 36151372 + 0.913749359973624 NA promoter-TSS (NM_001101478) promoter-TSS (NM_001101478) 68 NM_001101478 241944 Mm.260056 NM_001101478 ENSMUSG00000033883 D3Ertd254e - DNA segment, Chr 3, ERATO Doi 254, expressed protein-coding unique_peak2_18_75_0.352436689953305_6.42414585842024_0.913749359973624 chr17 25868314 25868968 + 0.913749359973624 NA promoter-TSS (NM_026633) promoter-TSS (NM_026633) 97 NM_026633 68241 Mm.328870 NM_026633 ENSMUSG00000025732 Fam195a 9530058B02Rik|Mcrip2 family with sequence similarity 195, member A protein-coding common_peak1_18_75_0.352436689953305_6.42414585842024_0.913749359973624 chr11 87719533 87720015 + 0.913749359973624 NA intron (NM_172448, intron 3 of 9) ID_B1|SINE|B4 -17791 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding common_peak1_114_955_-0.114300417008918_9.84371659947629_0.91364118946259 chr10 81996675 81997662 + 0.91364118946259 NA Intergenic CpG -50959 NM_001024626 408062 Mm.391409 NM_001024626 ENSMUSG00000061371 Zfp873 - zinc finger protein 873 protein-coding common_peak2_200_1654_0.0820627146084263_10.7336468589988_0.913411072955587 chr8 22858414 22861084 + 0.913411072955587 NA intron (NM_001081149, intron 1 of 17) CpG 210 NM_001081149 244349 Mm.182776 NM_001081149 ENSMUSG00000031540 Kat6a 1500036M03|9930021N24Rik|MOZ|Myst3|Zfp220 K(lysine) acetyltransferase 6A protein-coding common_peak2_187_1520_0.085551272074234_10.6135800737616_0.913346782245157 chr6 108569508 108572228 + 0.913346782245157 NA Intergenic Intergenic 52299 NR_040757 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_25_116_0.285056525057527_7.01289298211217_0.913340083417317 chr7 30429889 30430874 + 0.913340083417317 NA Intergenic MTC|LTR|ERVL-MaLR 7077 NM_172142 243910 Mm.386878 NM_172142 ENSMUSG00000036931 Nfkbid IkappaBNS nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta protein-coding common_peak1_21_143_-0.310127258748361_7.01486137206813_0.913340083417317 chr17 23797053 23797471 + 0.913340083417317 NA Intergenic ORR1G|LTR|ERVL-MaLR -5925 NM_175229 75956 Mm.5222 NM_175229 ENSMUSG00000039218 Srrm2 5033413A03Rik|AA410130|SRm300|mKIAA0324 serine/arginine repetitive matrix 2 protein-coding common_peak1_25_116_0.285056525057527_7.01289298211217_0.913340083417317 chr4 126251443 126251976 + 0.913340083417317 NA intron (NM_144941, intron 1 of 16) intron (NM_144941, intron 1 of 16) 4610 NM_144941 245877 Mm.266716 NM_144941 ENSMUSG00000028849 Map7d1 AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187 MAP7 domain containing 1 protein-coding common_peak2_21_143_-0.310127258748361_7.01486137206813_0.913340083417317 chr3 100969084 100969850 + 0.913340083417317 NA exon (NM_001013026, exon 2 of 23) exon (NM_001013026, exon 2 of 23) 196 NM_001013026 74044 Mm.270961 NM_001013026 ENSMUSG00000033222 Ttf2 4632434F22Rik|8030447N19|AV218430 transcription termination factor, RNA polymerase II protein-coding common_peak1_21_143_-0.310127258748361_7.01486137206813_0.913340083417317-3 chr6 38809711 38810216 + 0.913340083417317 NA intron (NM_010433, intron 2 of 14) RLTR26|LTR|ERVK 27348 NM_001136065 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding unique_peak2_21_143_-0.310127258748361_7.01486137206813_0.913340083417317 chr11 50104788 50106043 + 0.913340083417317 NA TTS (NM_021540) TTS (NM_021540) -25945 NM_001290759 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding common_peak1_21_143_-0.310127258748361_7.01486137206813_0.913340083417317-2 chr2 131233453 131233869 + 0.913340083417317 NA promoter-TSS (NM_001206385) promoter-TSS (NM_001206385) -402 NM_001206383 228607 Mm.287226 NM_144888 ENSMUSG00000037523 Mavs D430028G21Rik|IPS-1|Visa|cardif mitochondrial antiviral signaling protein protein-coding common_peak2_159_1239_0.0948467559156061_10.323547783232_0.913272109445668 chr8 84041737 84043551 + 0.913272109445668 NA promoter-TSS (NM_016671) promoter-TSS (NM_016671) -69 NM_016671 50931 Mm.38386 NM_016671 ENSMUSG00000005465 Il27ra CRL1|IL-27R|Tccr|WSX-1|Wsx1|zcytor1 interleukin 27 receptor, alpha protein-coding common_peak2_96_782_-0.127530133927632_9.54910343032723_0.913261363014745 chr8 70138646 70140360 + 0.913261363014745 NA promoter-TSS (NM_011266) promoter-TSS (NM_011266) 4 NR_132133 72368 Mm.644 NM_001145552 ENSMUSG00000002345 Borcs8 2310045N01Rik|Mef2bnb BLOC-1 related complex subunit 8 protein-coding common_peak1_68_525_-0.156323669045507_8.96075715476955_0.913120479349255 chr15 102325785 102326719 + 0.913120479349255 NA exon (NM_027044, exon 1 of 6) exon (NM_027044, exon 1 of 6) 136 NM_027044 56612 Mm.158264 NM_020031 ENSMUSG00000001289 Pfdn5 1190001O17Rik|1700010A06Rik|D15Ertd697e|Eig1|MM-1 prefoldin 5 protein-coding common_peak1_175_1581_-0.0878992082197723_10.5835842803629_0.913084094253514 chr17 55958515 55960200 + 0.913084094253514 NA promoter-TSS (NR_108021) promoter-TSS (NR_108021) 44 NR_108021 100504333 Mm.391908 NR_108021 ENSMUSG00000097077 Gm16712 - predicted gene, 16712 ncRNA common_peak1_344_3262_0.0587176350332488_11.7013420896085_0.912938712212761 chr1 131095758 131097919 + 0.912938712212761 NA intron (NM_008551, intron 1 of 9) CpG 1005 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding common_peak1_30_210_-0.254416983972879_7.59389069672075_0.912814895468703-4 chr7 125588343 125588947 + 0.912814895468703 NA Intergenic ORR1A2|LTR|ERVL-MaLR -14784 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak1_30_210_-0.254416983972879_7.59389069672075_0.912814895468703-3 chr6 91516080 91516628 + 0.912814895468703 NA promoter-TSS (NM_009531) promoter-TSS (NM_009531) 319 NM_026309 67678 Mm.246693 NM_026309 ENSMUSG00000034192 Lsm3 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_30_210_-0.254416983972879_7.59389069672075_0.912814895468703-2 chr2 144264912 144265423 + 0.912814895468703 NA TTS (NR_030762) TTS (NR_030762) 1035 NR_030762 100313519 Mm.453538 NR_030762 ENSMUSG00000077714 Snord17 MBI-43 small nucleolar RNA, C/D box 17 snoRNA common_peak1_30_210_-0.254416983972879_7.59389069672075_0.912814895468703 chr13 75797344 75798019 + 0.912814895468703 NA Intergenic Intergenic -42205 NM_053108 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak2_30_210_-0.254416983972879_7.59389069672075_0.912814895468703 chr18 50127962 50128882 + 0.912814895468703 NA intron (NM_008292, intron 1 of 23) CpG 221 NM_008292 15488 Mm.277857 NM_008292 ENSMUSG00000024507 Hsd17b4 17-beta-HSD|17[b]-HSD|DBP|MFE-2|MFP2|MPF-2|Mfp-2|perMFE-2 hydroxysteroid (17-beta) dehydrogenase 4 protein-coding common_peak1_77_606_-0.145996945461464_9.17255423352495_0.912110551903969 chr4 43557533 43558772 + 0.912110551903969 NA intron (NM_011602, intron 1 of 56) intron (NM_011602, intron 1 of 56) 4431 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding common_peak1_142_1236_-0.100439438393943_10.2224100657794_0.91206959493651 chr5 115157261 115159165 + 0.91206959493651 NA promoter-TSS (NM_175403) promoter-TSS (NM_175403) -37 NM_175403 109154 Mm.153963 NM_175403 ENSMUSG00000048578 Mlec 2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152 malectin protein-coding common_peak2_66_507_-0.158140986622442_8.90961419346094_0.911687385025472 chr7 24610079 24611788 + 0.911687385025472 NA promoter-TSS (NM_001102613) promoter-TSS (NM_001102613) -395 NM_001102613 232970 Mm.333663 NM_001102613 ENSMUSG00000074277 Phldb3 EG232970|ENSMUSG00000061511|Gm10102 pleckstrin homology like domain, family B, member 3 protein-coding common_peak1_166_1486_-0.0914423263644597_10.4924677688702_0.911432023488063 chr6 54971727 54973080 + 0.911432023488063 NA promoter-TSS (NM_001171007) promoter-TSS (NM_001171007) 209 NM_172729 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_163_1454_-0.0921355503575079_10.4607356626169_0.911285104146815 chr9 57520525 57522512 + 0.911285104146815 NA intron (NM_007747, intron 1 of 4) CpG 286 NM_007747 12858 Mm.273403 NM_007747 ENSMUSG00000000088 Cox5a AA959768|CcOX cytochrome c oxidase subunit Va protein-coding common_peak1_11_74_-0.441655533590141_6.00799092370081_0.910921989990114 chr10 26375877 26376246 + 0.910921989990114 NA promoter-TSS (NM_172787) promoter-TSS (NM_172787) -876 NM_172787 237339 Mm.338439 NM_172787 ENSMUSG00000039089 L3mbtl3 AI481284|MBT-1 l(3)mbt-like 3 (Drosophila) protein-coding unique_peak2_11_74_-0.441655533590141_6.00799092370081_0.910921989990114-4 chr8 22060680 22061296 + 0.910921989990114 NA promoter-TSS (NM_007511) promoter-TSS (NM_007511) 267 NM_183142 207958 Mm.267439 NM_183142 ENSMUSG00000063362 Alg11 AI849156|AW492253|B230397C21|Mmat-4(5) asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) protein-coding unique_peak2_11_74_-0.441655533590141_6.00799092370081_0.910921989990114-2 chr2 72841334 72842110 + 0.910921989990114 NA Intergenic Intergenic -28005 NR_102349 76218 Mm.75260 NR_102348 ENSMUSG00000085427 6430710C18Rik 5033406J01Rik RIKEN cDNA 6430710C18 gene ncRNA unique_peak2_11_74_-0.441655533590141_6.00799092370081_0.910921989990114 chr1 88668167 88668969 + 0.910921989990114 NA Intergenic Intergenic 33623 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding unique_peak2_11_74_-0.441655533590141_6.00799092370081_0.910921989990114-3 chr5 113812970 113813740 + 0.910921989990114 NA Intergenic Intergenic -13003 NM_146162 231633 Mm.41681 NM_146162 ENSMUSG00000054675 Tmem119 AW208946|BC025600|obif transmembrane protein 119 protein-coding common_peak2_44_320_-0.200250849557671_8.22630406234347_0.91089656289491 chr15 79208570 79210060 + 0.91089656289491 NA intron (NR_029470, intron 2 of 4) intron (NR_029470, intron 2 of 4) -19858 NM_008837 18693 Mm.259464 NM_008837 ENSMUSG00000068206 Pick1 Prkcabp protein interacting with C kinase 1 protein-coding common_peak1_44_320_-0.200250849557671_8.22630406234347_0.91089656289491 chr6 34869290 34870231 + 0.91089656289491 NA intron (NM_197986, intron 1 of 1) intron (NM_197986, intron 1 of 1) 6614 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak1_27_187_-0.268024101659712_7.42057680084778_0.91025309936065 chr8 71366204 71366816 + 0.91025309936065 NA promoter-TSS (NM_025917) promoter-TSS (NM_025917) -338 NM_001145780 67023 Mm.41890 NM_025917 ENSMUSG00000002395 Use1 2010315L10Rik|5730403H22Rik|AV002165|D12|Ed2|Q-snare|p31 unconventional SNARE in the ER 1 homolog (S. cerevisiae) protein-coding common_peak1_13_49_0.416096249056846_5.85190431430315_0.910002444715788-2 chr14 53957591 53957988 + 0.910002444715788 NA Intergenic Lx5|LINE|L1 296140 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak1_13_49_0.416096249056846_5.85190431430315_0.910002444715788 chr1 136466293 136466582 + 0.910002444715788 NA Intergenic CpG -1411 NM_001287179 381293 Mm.458468 NM_001081258 ENSMUSG00000041498 Kif14 D1Ertd367e|E130203M01 kinesin family member 14 protein-coding unique_peak1_13_49_0.416096249056846_5.85190431430315_0.910002444715788-2 chr5 135127652 135128043 + 0.910002444715788 NA intron (NM_021455, intron 7 of 16) intron (NM_021455, intron 7 of 16) 20956 NM_021455 58805 Mm.34213 NM_021455 ENSMUSG00000005373 Mlxipl ChREBP|Mlx|WS-bHLH|Wbscr14|bHLHd14 MLX interacting protein-like protein-coding common_peak1_13_49_0.416096249056846_5.85190431430315_0.910002444715788 chr11 46454739 46455104 + 0.910002444715788 NA promoter-TSS (NM_134250) promoter-TSS (NM_134250) -10 NM_134250 171285 Mm.72168 NM_134250 ENSMUSG00000020399 Havcr2 TIM-3|Tim3|Timd3 hepatitis A virus cellular receptor 2 protein-coding common_peak1_13_49_0.416096249056846_5.85190431430315_0.910002444715788-3 chr5 129778775 129779159 + 0.910002444715788 NA intron (NM_133900, intron 3 of 7) intron (NM_133900, intron 3 of 7) 8286 NM_133900 100678 Mm.271784 NM_133900 ENSMUSG00000029446 Psph AI480570|PSP|PSPase phosphoserine phosphatase protein-coding common_peak2_99_810_-0.124318289708178_9.60139895936318_0.909896116883219 chr17 78199644 78201527 + 0.909896116883219 NA 5' UTR (NM_015800, exon 1 of 17) 5' UTR (NM_015800, exon 1 of 17) 337 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding common_peak1_96_655_0.127786358745325_9.42144518399075_0.909629354431235 chr11 54521759 54522733 + 0.909629354431235 NA promoter-TSS (NM_175258) promoter-TSS (NM_175258) -599 NM_001252494 192786 Mm.254404 NM_175258 ENSMUSG00000037533 Rapgef6 A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052 Rap guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak1_17_115_-0.353295633254905_6.68133317850012_0.909580048283318-2 chr7 44305004 44305335 + 0.909580048283318 NA intron (NM_009131, intron 3 of 3) intron (NM_009131, intron 3 of 3) 1790 NM_009131 20256 Mm.20428 NM_009131 ENSMUSG00000004473 Clec11a AW457320|Clecsf3|Scgf C-type lectin domain family 11, member a protein-coding common_peak1_17_115_-0.353295633254905_6.68133317850012_0.909580048283318 chr14 73123327 73123795 + 0.909580048283318 NA Intergenic B4|SINE|B4 -18949 NM_001170694 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak2_64_490_-0.162664693981796_8.85824686732379_0.90930126767238 chr8 124240730 124242416 + 0.90930126767238 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 10179 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_246_2145_0.0719347577152014_11.1034017396141_0.909017926625037 chr17 25186939 25190255 + 0.909017926625037 NA promoter-TSS (NM_001290736) promoter-TSS (NM_001290736) 197 NM_001197024 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding unique_peak2_24_165_-0.289024239210541_7.23052731174165_0.908685850419568 chr4 43965149 43966290 + 0.908685850419568 NA intron (NM_027450, intron 1 of 4) MLTR14|LTR|ERV1 8017 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak2_62_472_-0.164087213387612_8.80365276664559_0.908581976828618 chr4 116506961 116508414 + 0.908581976828618 NA intron (NM_008389, intron 1 of 8) CpG 138 NM_008389 16351 Mm.1350 NM_008389 ENSMUSG00000028696 Ipp D4Jhu8|Mipp IAP promoted placental gene protein-coding common_peak2_73_569_-0.148422146654339_9.08060703572493_0.90781951690097 chr2 103760389 103762023 + 0.90781951690097 NA promoter-TSS (NM_153126) promoter-TSS (NM_153126) 44 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak1_46_337_-0.197748348856166_8.3020052618541_0.907565088031808 chr10 81059748 81060527 + 0.907565088031808 NA promoter-TSS (NM_024499) promoter-TSS (NM_024499) 17 NM_024499 52551 Mm.30068 NM_024499 ENSMUSG00000004937 Sgta 5330427H01Rik|AI194281|D10Ertd190e|Sgt|Stg small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha protein-coding common_peak1_42_227_0.21283715608921_7.93930859220935_0.907051510775498 chr1 175691928 175692754 + 0.907051510775498 NA exon (NM_010098, exon 1 of 4) exon (NM_010098, exon 1 of 4) 291 NM_010098 13603 Mm.32744 NM_010098 ENSMUSG00000026525 Opn3 ERO|Ecpn opsin 3 protein-coding common_peak1_42_227_0.21283715608921_7.93930859220935_0.907051510775498-2 chr2 155930004 155930584 + 0.907051510775498 NA promoter-TSS (NM_018888) promoter-TSS (NM_018888) 16 NM_018888 56046 Mm.158827 NM_018888 ENSMUSG00000005882 Uqcc1 2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding common_peak1_37_264_-0.222872034867316_7.9384125320169_0.907051510775498 chr10 117921648 117922329 + 0.907051510775498 NA Intergenic Intergenic -3471 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_42_227_0.21283715608921_7.93930859220935_0.907051510775498-3 chr6 29231899 29232756 + 0.907051510775498 NA Intergenic Intergenic -15963 NM_001302934 23917 Mm.260707 NM_011829 ENSMUSG00000003500 Impdh1 B930086D20Rik|IMPDH-I inosine 5'-phosphate dehydrogenase 1 protein-coding common_peak1_143_1246_-0.0997234543979353_10.2343840226307_0.906996760415301 chr5 151368458 151369836 + 0.906996760415301 NA intron (NR_045700, intron 1 of 3) intron (NR_045700, intron 1 of 3) 472 NR_045699 625175 Mm.443286 NR_045699 ENSMUSG00000097321 1700028E10Rik A630054D14|Gm6561 RIKEN cDNA 1700028E10 gene ncRNA common_peak1_66_406_0.161658715883476_8.74971434220799_0.906897972082114 chr17 45747626 45749043 + 0.906897972082114 NA Intergenic Intergenic -14490 NM_028164 72240 Mm.482897 NM_028164 ENSMUSG00000094690 1600014C23Rik - RIKEN cDNA 1600014C23 gene protein-coding common_peak2_60_455_-0.168370563117769_8.74870473260586_0.906897972082114 chr18 73541075 73542767 + 0.906897972082114 NA Intergenic Intergenic -30784 NM_001039214 240396 Mm.24131 NM_001039214 ENSMUSG00000037253 Mex3c A130001D14Rik|BC035207|BM-013|Rkhd2 mex3 RNA binding family member C protein-coding common_peak1_60_455_-0.168370563117769_8.74870473260586_0.906897972082114 chr17 56613370 56614470 + 0.906897972082114 NA TTS (NM_028782) TTS (NM_028782) 525 NM_018730 54217 Mm.11376 NM_018730 ENSMUSG00000057863 Rpl36 - ribosomal protein L36 protein-coding common_peak2_35_179_0.239444576729348_7.61157538469435_0.90654122079279 chr11 16980448 16981826 + 0.90654122079279 NA intron (NM_019549, intron 9 of 9) intron (NM_019549, intron 9 of 9) 27581 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding common_peak1_35_179_0.239444576729348_7.61157538469435_0.90654122079279-2 chr2 6717938 6718434 + 0.90654122079279 NA intron (NM_001310447, intron 1 of 11) B4|SINE|B4 3476 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_35_179_0.239444576729348_7.61157538469435_0.90654122079279 chr11 70539961 70540625 + 0.90654122079279 NA promoter-TSS (NM_008876) promoter-TSS (NM_008876) 21 NM_001302476 18806 Mm.260177 NM_008876 ENSMUSG00000020828 Pld2 PLD1C phospholipase D2 protein-coding common_peak1_126_1074_-0.107910250302778_10.0161658193254_0.906495177006944 chr10 81176618 81177999 + 0.906495177006944 NA intron (NM_007907, intron 1 of 13) intron (NM_007907, intron 1 of 13) 677 NM_007907 13629 Mm.2903 NM_007907 ENSMUSG00000034994 Eef2 Ef-2 eukaryotic translation elongation factor 2 protein-coding common_peak2_120_869_0.111695253899358_9.82071921768577_0.906292820010644 chr10 128321806 128323529 + 0.906292820010644 NA 5' UTR (NM_019953, exon 1 of 6) 5' UTR (NM_019953, exon 1 of 6) 208 NM_019953 56530 Mm.44220 NM_019953 ENSMUSG00000025381 Cnpy2 5330432A10Rik|AW229003|D10Bwg1546e|Tmem4|Zsig9 canopy FGF signaling regulator 2 protein-coding common_peak2_52_386_-0.180447990701298_8.50596576079376_0.906262988597184 chr2 90504141 90505717 + 0.906262988597184 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -25755 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_52_386_-0.180447990701298_8.50596576079376_0.906262988597184-2 chr3 32364949 32366421 + 0.906262988597184 NA promoter-TSS (NM_009517) promoter-TSS (NM_009517) -20 NM_009517 22401 Mm.35705 NM_009517 ENSMUSG00000027663 Zmat3 Wig1 zinc finger matrin type 3 protein-coding common_peak2_58_438_-0.172550724493533_8.69180176728859_0.905604688690271 chr7 27544538 27545988 + 0.905604688690271 NA intron (NM_011116, intron 1 of 13) intron (NM_011116, intron 1 of 13) 7849 NM_011116 18807 Mm.6483 NM_011116 ENSMUSG00000003363 Pld3 Sam-9 phospholipase D family, member 3 protein-coding unique_peak2_50_370_-0.187604599493346_8.44147307687413_0.905451735779936 chr15 27826525 27828781 + 0.905451735779936 NA intron (NM_001081302, intron 28 of 56) intron (NM_001081302, intron 28 of 56) -146111 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak2_50_370_-0.187604599493346_8.44147307687413_0.905451735779936 chr7 75685858 75687334 + 0.905451735779936 NA intron (NM_029332, intron 13 of 36) L3|LINE|CR1 -161742 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_50_370_-0.187604599493346_8.44147307687413_0.905451735779936 chr12 20920797 20921760 + 0.905451735779936 NA Intergenic CpG -105499 NR_015521 69513 Mm.273972 NR_015521 ENSMUSG00000099759 1700030C10Rik - RIKEN cDNA 1700030C10 gene ncRNA common_peak1_32_225_-0.242859014754308_7.69874945503803_0.90512237052776 chr13 40917285 40918017 + 0.90512237052776 NA promoter-TSS (NM_133219) promoter-TSS (NM_133219) 17 NM_133219 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding unique_peak2_32_225_-0.242859014754308_7.69874945503803_0.90512237052776 chr3 136724923 136726037 + 0.90512237052776 NA intron (NM_001293622, intron 1 of 12) intron (NM_001293622, intron 1 of 12) 55414 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding common_peak1_32_225_-0.242859014754308_7.69874945503803_0.90512237052776-2 chr5 137596933 137597572 + 0.90512237052776 NA exon (NM_030037, exon 5 of 6) exon (NM_030037, exon 5 of 6) 3456 NM_001254762 68929 Mm.41355 NM_030037 ENSMUSG00000037221 Mospd3 1190005J19Rik|5133401H10Rik|Gtig2|R124 motile sperm domain containing 3 protein-coding common_peak2_30_147_0.257228839105356_7.33806778518163_0.905081637873177 chr11 5505573 5506470 + 0.905081637873177 NA Intergenic Intergenic -14620 NM_013842 22433 Mm.469937 NM_013842 ENSMUSG00000020484 Xbp1 D11Ertd39e|TREB-5|TREB5|XBP-1 X-box binding protein 1 protein-coding unique_peak2_30_147_0.257228839105356_7.33806778518163_0.905081637873177-2 chr5 75825421 75826478 + 0.905081637873177 NA Intergenic Intergenic 152479 NM_010612 16542 Mm.285 NM_010612 ENSMUSG00000062960 Kdr 6130401C07|Flk-1|Flk1|Krd-1|Ly73|VEGFR-2|VEGFR2|sVEGFR-2 kinase insert domain protein receptor protein-coding unique_peak2_30_147_0.257228839105356_7.33806778518163_0.905081637873177 chr1 37871751 37872918 + 0.905081637873177 NA intron (NM_001037918, intron 1 of 1) intron (NM_001037918, intron 1 of 1) 128 NM_001037918 623661 Mm.138000 NM_001037918 ENSMUSG00000037216 Lipt1 EG623661 lipoyltransferase 1 protein-coding common_peak2_30_147_0.257228839105356_7.33806778518163_0.905081637873177-2 chrX 107177823 107178934 + 0.905081637873177 NA Intergenic Intergenic 28763 NM_175442 213438 Mm.265244 NM_175442 ENSMUSG00000054293 A630033H20Rik AI662791|P2ry10 RIKEN cDNA A630033H20 gene protein-coding common_peak2_110_916_-0.116859756230358_9.78234804547987_0.905060384399956-2 chr7 30728814 30730552 + 0.905060384399956 NA promoter-TSS (NM_027215) promoter-TSS (NM_027215) -149 NM_027215 69804 Mm.27499 NM_027215 ENSMUSG00000006315 Tmem147 2010004E11Rik|5033425B17Rik|Nifie14 transmembrane protein 147 protein-coding common_peak2_110_916_-0.116859756230358_9.78234804547987_0.905060384399956 chr12 16568656 16570582 + 0.905060384399956 NA intron (NM_172950, intron 5 of 19) intron (NM_172950, intron 5 of 19) 20151 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak1_274_2694_-0.0666729523756313_11.3627330814521_0.904700484713565 chr11 6415130 6417310 + 0.904700484713565 NA intron (NM_008907, intron 1 of 4) CpG 350 NM_008907 268373 Mm.5246 NM_008907 ENSMUSG00000071866 Ppia 2700098C05|Cphn|CyP-18|CypA peptidylprolyl isomerase A protein-coding common_peak1_44_241_0.207315400290037_8.02252093741961_0.904569024715537 chr5 135542275 135542976 + 0.904569024715537 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 2497 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak2_123_897_0.109335192365872_9.86523923092408_0.904444137437249 chr5 121710848 121712897 + 0.904444137437249 NA exon (NM_009125, exon 1 of 25) exon (NM_009125, exon 1 of 25) 263 NM_009125 20239 Mm.260900 NM_009125 ENSMUSG00000042605 Atxn2 9630045M23Rik|ATX2|AW544490|Sca2 ataxin 2 protein-coding common_peak2_186_1510_0.0856297289371959_10.6041028096334_0.904430559347673 chr5 105050990 105055304 + 0.904430559347673 NA intron (NM_029509, intron 1 of 9) intron (NM_029509, intron 1 of 9) 414 NM_029509 76074 Mm.458519 NM_029509 ENSMUSG00000034438 Gbp8 5830443L24Rik|mGBP8 guanylate-binding protein 8 protein-coding common_peak1_174_1570_-0.0879161638923414_10.573509383348_0.904118390161687 chr18 6515195 6517077 + 0.904118390161687 NA promoter-TSS (NM_007935) promoter-TSS (NM_007935) -28 NM_007935 13831 Mm.312133 NM_007935 ENSMUSG00000024240 Epc1 2400007E14Rik|5730566F07Rik|A930032N02Rik|mir-1893 enhancer of polycomb homolog 1 (Drosophila) protein-coding common_peak1_105_867_-0.11919715581501_9.70195265453697_0.903891835709539 chr10 81863623 81864757 + 0.903891835709539 NA intron (NM_001243067, intron 1 of 3).2 CpG 256 NM_001243067 73610 Mm.490466 NM_001243067 ENSMUSG00000096795 Zfp433 1700123A16Rik zinc finger protein 433 protein-coding common_peak2_143_1085_0.0997139076273736_10.134665341618_0.903739984800022 chr10 36973912 36975738 + 0.903739984800022 NA intron (NM_008229, intron 1 of 13) CpG 281 NM_008229 15182 Mm.19806 NM_008229 ENSMUSG00000019777 Hdac2 D10Wsu179e|YAF1|Yy1bp|mRPD3 histone deacetylase 2 protein-coding common_peak2_135_1164_-0.102741045008402_10.1347437170374_0.903739984799627 chr6 37463230 37465190 + 0.903739984799627 NA Intergenic IAPLTR2_Mm|LTR|ERVK -22062 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak1_21_92_0.32063893158592_6.69947827690099_0.903702287631307 chr10 119081062 119081519 + 0.903702287631307 NA Intergenic Intergenic -11615 NR_045348 73400 Mm.416864 NR_045348 ENSMUSG00000100681 1700064J06Rik - RIKEN cDNA 1700064J06 gene ncRNA common_peak1_21_92_0.32063893158592_6.69947827690099_0.903702287631307-2 chr15 12213998 12214491 + 0.903702287631307 NA intron (NM_172958, intron 1 of 15) intron (NM_172958, intron 1 of 15) 9150 NM_172958 268783 Mm.54460 NM_172958 ENSMUSG00000039458 Mtmr12 3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682 myotubularin related protein 12 protein-coding unique_peak2_21_92_0.32063893158592_6.69947827690099_0.903702287631307 chr4 144949290 144950135 + 0.903702287631307 NA Intergenic Intergenic 56575 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_21_92_0.32063893158592_6.69947827690099_0.903702287631307-3 chr6 67373539 67374062 + 0.903702287631307 NA intron (NM_008354, intron 1 of 15) intron (NM_008354, intron 1 of 15) 2337 NM_008354 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak2_69_533_-0.152637905977665_8.98437697869872_0.903443804757741 chr11 80574821 80576550 + 0.903443804757741 NA intron (NM_177390, intron 20 of 21) intron (NM_177390, intron 20 of 21) -66579 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA common_peak2_161_1260_0.0926018338510151_10.3466534772537_0.903397493059099 chr11 58214065 58216173 + 0.903397493059099 NA 5' UTR (NM_019440, exon 1 of 2) 5' UTR (NM_019440, exon 1 of 2) 142 NM_019440 54396 Mm.458517 NM_019440 ENSMUSG00000069874 Irgm2 AI481100|GTPI|Ifggd2|Iigp2 immunity-related GTPase family M member 2 protein-coding common_peak1_317_3207_-0.0609698336721678_11.6169735096188_0.90336237342929 chr1 171502445 171504646 + 0.90336237342929 NA promoter-TSS (NM_019484) promoter-TSS (NM_019484) 67 NM_019484 56009 Mm.389208 NM_019484 ENSMUSG00000060244 Alyref2 C130042O11Rik|REF2|Refbp2 Aly/REF export factor 2 protein-coding common_peak2_100_819_-0.122631905899988_9.61816414655545_0.902920242625181 chr8 106209940 106211816 + 0.902920242625181 NA promoter-TSS (NM_001007567) promoter-TSS (NM_001007567) 55 NM_001007567 66432 Mm.269029 NM_001007567 ENSMUSG00000033106 Slc7a6os 2010007L18Rik|2400002F02Rik solute carrier family 7, member 6 opposite strand protein-coding common_peak1_73_462_0.151527579137531_8.930632172829_0.902919591520163 chr11 78696598 78697457 + 0.902919591520163 NA 5' UTR (NM_008702, exon 1 of 11) 5' UTR (NM_008702, exon 1 of 11) 398 NM_008702 18099 Mm.9001 NM_008702 ENSMUSG00000017376 Nlk AI194375 nemo like kinase protein-coding common_peak2_259_2288_0.0696373951499218_11.1953204451306_0.90280472947598 chr12 32377968 32380397 + 0.90280472947598 NA exon (NM_001162903, exon 1 of 1) exon (NM_001162903, exon 1 of 1) 393 NM_001162903 72123 Mm.341352 NM_028111 ENSMUSG00000090946 Ccdc71l 2010109K11Rik|AV375874 coiled-coil domain containing 71 like protein-coding common_peak2_90_725_-0.131480695275703_9.4380853903579_0.902609100659945 chr8 69143189 69146029 + 0.902609100659945 NA Intergenic Intergenic -3656 NM_199364 211134 Mm.409446 NM_199364 ENSMUSG00000036306 Lzts1 F37|FEZ1|PSD-Zip70 leucine zipper, putative tumor suppressor 1 protein-coding common_peak1_39_280_-0.216679781403794_8.02608642951903_0.902252508166996-2 chr7 142533024 142533853 + 0.902252508166996 NA intron (NM_011288, intron 1 of 4) intron (NM_011288, intron 1 of 4) 321 NM_011288 19935 Mm.12144 NM_011288 ENSMUSG00000037772 Mrpl23 L23mrp|Rpl23|Rpl23l mitochondrial ribosomal protein L23 protein-coding common_peak1_39_280_-0.216679781403794_8.02608642951903_0.902252508166996 chr17 24937035 24937562 + 0.902252508166996 NA promoter-TSS (NM_013931) promoter-TSS (NM_013931) -321 NM_013931 30957 Mm.43081 NM_013931 ENSMUSG00000024163 Mapk8ip3 BB120594|D17Wsu15e|JIP-3|JSAP1|JSAP1a|JSAP1b|JSAP1c|JSAP1d|Jip3|Syd2|mKIAA1066 mitogen-activated protein kinase 8 interacting protein 3 protein-coding common_peak2_39_280_-0.216679781403794_8.02608642951903_0.902252508166996 chr3 88774607 88775764 + 0.902252508166996 NA Intergenic CpG -1872 NR_028359 100302730 Mm.482358 NR_028359 5830417I10Rik 3632445O20Rik|AA387005 gon-4-like pseudogene pseudo common_peak2_162_1443_-0.0920105829658002_10.4498497354043_0.902125625568253 chr7 30321101 30323780 + 0.902125625568253 NA promoter-TSS (NM_001033140) promoter-TSS (NM_001033140) -65 NM_001033140 68332 Mm.6844 NM_001033140 ENSMUSG00000074211 Sdhaf1 0610010E21Rik|AI430885|AW490662|Lyrm8 succinate dehydrogenase complex assembly factor 1 protein-coding common_peak1_150_1317_-0.0956142700224998_10.3163275199968_0.901997899437387 chr3 103914518 103915731 + 0.901997899437387 NA exon (NM_172684, exon 1 of 7) exon (NM_172684, exon 1 of 7) 1004 NM_172684 229675 Mm.29366 NM_172684 ENSMUSG00000044098 Rsbn1 C230004D03Rik|E330004N01|Rosbin|Rsbn|Rsbp|mKIAA3002 rosbin, round spermatid basic protein 1 protein-coding common_peak2_227_1940_0.0751389392092232_10.9601538723183_0.901864480897322 chr15 3978639 3980616 + 0.901864480897322 NA promoter-TSS (NM_134099) promoter-TSS (NM_134099) -54 NM_134099 106052 Mm.234191 NM_134099 ENSMUSG00000022184 Fbxo4 1700096C12Rik|AI851261|AW494535|Fbx4 F-box protein 4 protein-coding common_peak2_227_1940_0.0751389392092232_10.9601538723183_0.901864480897322-2 chr15 100038415 100040105 + 0.901864480897322 NA intron (NM_001159361, intron 1 of 37) CpG 596 NM_001159361 239667 Mm.243658 NM_172819 ENSMUSG00000023026 Dip2b 4932422C22|AI317237|AI854602|mKIAA1463 disco interacting protein 2 homolog B protein-coding common_peak1_118_851_0.112362750013807_9.79089099523274_0.901649855091877 chr8 126944746 126946003 + 0.901649855091877 NA intron (NM_024214, intron 1 of 4) intron (NM_024214, intron 1 of 4) 547 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak1_27_128_0.275337494594671_7.14889600272059_0.901453649099037 chr14 79301743 79302349 + 0.901453649099037 NA promoter-TSS (NM_025427) promoter-TSS (NM_025427) -411 NM_025427 66214 Mm.29811 NM_025427 ENSMUSG00000022018 Rgcc 1190002H23Rik|Rgc-32|Rgc32 regulator of cell cycle protein-coding unique_peak2_9_61_-0.489674393942455_5.70935911341565_0.901340839087553-2 chr18 57878519 57879035 + 0.901340839087553 NA promoter-TSS (NM_009194) promoter-TSS (NM_009194) 99 NM_009194 20496 Mm.399997 NM_009194 ENSMUSG00000024597 Slc12a2 9330166H04Rik|Nkcc1|mBSC2|sy-ns solute carrier family 12, member 2 protein-coding unique_peak2_9_61_-0.489674393942455_5.70935911341565_0.901340839087553 chr11 79076717 79077283 + 0.901340839087553 NA intron (NM_013571, intron 1 of 17) intron (NM_013571, intron 1 of 17) 53403 NR_045873 790910 Mm.440410 NR_045873 Gm11201 ENSMUSG00000072637|OTTMUSG00000000169 predicted gene 11201 ncRNA common_peak1_12_44_0.436955837124902_5.71033101489213_0.901340839087553 chr8 119814103 119814506 + 0.901340839087553 NA intron (NM_028071, intron 3 of 3) intron (NM_028071, intron 3 of 3) 26275 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak1_127_1083_-0.106058844669635_10.0291196190191_0.90127833399676 chr7 31088379 31090437 + 0.90127833399676 NA Intergenic ORR1B1|LTR|ERVL-MaLR -12711 NM_008557 17178 Mm.263847 NM_008557 ENSMUSG00000057092 Fxyd3 Mat8 FXYD domain-containing ion transport regulator 3 protein-coding common_peak2_76_596_-0.144865580491739_9.14915433101894_0.900721737530518 chr17 23770883 23772360 + 0.900721737530518 NA promoter-TSS (NM_153791) promoter-TSS (NM_153791) -30 NM_153791 224613 Mm.328835 NM_153791 ENSMUSG00000040097 Flywch1 E030034P13Rik|mKIAA1552 FLYWCH-type zinc finger 1 protein-coding common_peak2_83_660_-0.137807195336482_9.29960286383945_0.900685490567401 chr2 121473206 121474750 + 0.900685490567401 NA promoter-TSS (NM_001081975) promoter-TSS (NM_001081975) 45 NM_001081975 100034361 Mm.270393 NM_001081975 ENSMUSG00000048222 Mfap1b - microfibrillar-associated protein 1B protein-coding common_peak2_83_660_-0.137807195336482_9.29960286383945_0.900685490567401-2 chr9 73067577 73070112 + 0.900685490567401 NA intron (NM_001301232, intron 1 of 5) intron (NM_001301232, intron 1 of 5) 4696 NM_001301232 11891 Mm.34867 NM_023635 ENSMUSG00000032202 Rab27a 2210402C08Rik|2410003M20Rik|4933437C11Rik|ash RAB27A, member RAS oncogene family protein-coding common_peak1_178_1613_-0.0868802778550126_10.6129847243503_0.900577520984791 chr5 24601060 24603277 + 0.900577520984791 NA promoter-TSS (NM_025891) promoter-TSS (NM_025891) -166 NM_025891 66993 Mm.436539 NM_025891 ENSMUSG00000028949 Smarcd3 1500001J14Rik|2210409C08Rik|BAF60C SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding common_peak2_48_270_0.194727195556814_8.17951263913228_0.900532625820629 chr2 120563060 120563905 + 0.900532625820629 NA intron (NM_011743, intron 1 of 21) CpG 349 NM_011743 20402 Mm.485295 NM_011743 ENSMUSG00000027288 Zfp106 Cd-1|D2Dcr28|H3a|Sh3bp3|Znf106|sirm zinc finger protein 106 protein-coding common_peak1_67_516_-0.157259586968051_8.93539067683091_0.90046058482631 chr11 106192730 106193525 + 0.90046058482631 NA intron (NM_028126, intron 1 of 10) intron (NM_028126, intron 1 of 10) 476 NM_001252448 72149 Mm.403722 NM_028126 ENSMUSG00000069631 Strada 2610019A05Rik|6030402H20Rik|AI480680|E130112C09Rik STE20-related kinase adaptor alpha protein-coding common_peak1_56_329_0.178176505304357_8.45541046689799_0.900278926837589 chr3 123385168 123386064 + 0.900278926837589 NA intron (NM_201638, intron 1 of 10) intron (NM_201638, intron 1 of 10) 374 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding common_peak2_56_329_0.178176505304357_8.45541046689799_0.900278926837589 chr2 102848614 102850799 + 0.900278926837589 NA intron (NM_009851, intron 5 of 18) intron (NM_009851, intron 5 of 18) 51959 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_168_1329_0.0906033181408574_10.422512189459_0.899887097220259 chr8 70352057 70353515 + 0.899887097220259 NA exon (NM_030680, exon 1 of 24) exon (NM_030680, exon 1 of 24) 487 NM_030680 19704 Mm.258280 NM_030680 ENSMUSG00000058301 Upf1 B430202H16Rik|NORF1|PNORF-1|Rent1|Upflp UPF1 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak2_54_314_0.182082999998636_8.3902495183866_0.899808699843787 chr17 87458917 87460306 + 0.899808699843787 NA Intergenic Intergenic -12676 NM_007589 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017 calmodulin 2 protein-coding common_peak2_85_561_0.137913161219378_9.20338290083061_0.899661445982161 chr11 106543921 106546486 + 0.899661445982161 NA intron (NM_198292, intron 4 of 11) intron (NM_198292, intron 4 of 11) 44212 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA unique_peak2_10_68_-0.475339025270573_5.87085494414288_0.89959890271595-3 chr14 55576175 55576815 + 0.89959890271595 NA exon (NM_026808, exon 2 of 2) exon (NM_026808, exon 2 of 2) 821 NM_026808 68680 Mm.36758 NM_026808 ENSMUSG00000022215 Fitm1 1110028A07Rik|AV010547|Cg10671|Fit1 fat storage-inducing transmembrane protein 1 protein-coding unique_peak2_10_68_-0.475339025270573_5.87085494414288_0.89959890271595-4 chr15 99651782 99652132 + 0.89959890271595 NA promoter-TSS (NM_001253809) promoter-TSS (NM_001253809) -301 NM_001253809 26934 Mm.273804 NM_012025 ENSMUSG00000023015 Racgap1 AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478 Rac GTPase-activating protein 1 protein-coding unique_peak2_10_68_-0.475339025270573_5.87085494414288_0.89959890271595-2 chr12 59132922 59133538 + 0.89959890271595 NA intron (NM_001165253, intron 1 of 22) B3A|SINE|B2 1777 NM_001165253 338320 Mm.213215 NM_146034 ENSMUSG00000021000 Mia2 Ctage5|D12Bwg0579e|Mea6|Mgea|Mgea6 melanoma inhibitory activity 2 protein-coding unique_peak2_10_68_-0.475339025270573_5.87085494414288_0.89959890271595 chr10 111232544 111233174 + 0.89959890271595 NA intron (NM_175489, intron 3 of 23) B3|SINE|B2 -65820 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding common_peak1_29_202_-0.256679484587473_7.53699617489144_0.899508009123807 chr14 67908372 67909001 + 0.899508009123807 NA intron (NM_177780, intron 1 of 51) intron (NM_177780, intron 1 of 51) 24886 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding common_peak2_34_240_-0.231443621706428_7.79716752537675_0.899412706836251-2 chrX 50611814 50613168 + 0.899412706836251 NA intron (NR_015505, intron 5 of 19) intron (NR_015505, intron 5 of 19) 22830 NR_015505 103012 Mm.482523 NR_015505 ENSMUSG00000085396 Firre 5830467J12Rik|6720401G13Rik|AW048145 functional intergenic repeating RNA element ncRNA common_peak2_34_240_-0.231443621706428_7.79716752537675_0.899412706836251 chr6 100670249 100671364 + 0.899412706836251 NA intron (NM_181590, intron 1 of 10) CpG 351 NM_181590 72171 Mm.256022 NM_181590 ENSMUSG00000035378 Shq1 2810403P18Rik|Grim-1 SHQ1 homolog (S. cerevisiae) protein-coding common_peak1_37_193_0.227063672396119_7.71344467838519_0.899356428757191 chr3 88835199 88835931 + 0.899356428757191 NA intron (NM_001242372, intron 1 of 32) intron (NM_001242372, intron 1 of 32) 334 NM_001242372 76022 Mm.126870 NM_027389 ENSMUSG00000054199 Gon4l 1500041I23Rik|2610100B20Rik|3632445O20Rik|5430404N14Rik|AA387005 gon-4-like (C.elegans) protein-coding common_peak1_384_3743_0.0544624080679821_11.8975959236174_0.899352039240396 chr18 67723252 67726327 + 0.899352039240396 NA promoter-TSS (NM_008977) promoter-TSS (NM_008977) -168 NM_008977 19255 Mm.260433 NM_008977 ENSMUSG00000024539 Ptpn2 AI325124|Ptpt|TC-PTP protein tyrosine phosphatase, non-receptor type 2 protein-coding common_peak2_65_498_-0.158963746490024_8.88341413209225_0.898992391187324 chr17 34647136 34647971 + 0.898992391187324 NA intron (NM_017406, intron 1 of 17) CpG 407 NM_017406 12915 Mm.4068 NM_017406 ENSMUSG00000015461 Atf6b AA617266|ATF6beta|Creb-rp|Crebl1 activating transcription factor 6 beta protein-coding common_peak2_50_285_0.187799440349067_8.25377105695292_0.89890061272931 chr2 73465912 73468088 + 0.89890061272931 NA intron (NM_153138, intron 1 of 7) intron (NM_153138, intron 1 of 7) -13111 NM_001289722 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding unique_peak2_20_136_-0.320557439162029_6.93775336337951_0.898859487326522 chr1 167393728 167394710 + 0.898859487326522 NA promoter-TSS (NM_025569) promoter-TSS (NM_025569) -422 NM_025569 66447 Mm.218286 NM_025569 ENSMUSG00000026688 Mgst3 2010012L10Rik|2010306B17Rik|2700004G04Rik|AA516734|GST-III microsomal glutathione S-transferase 3 protein-coding unique_peak2_24_110_0.291599325786278_6.94021552924325_0.898859487326522 chr5 21223546 21224712 + 0.898859487326522 NA intron (NM_175437, intron 8 of 30) intron (NM_175437, intron 8 of 30) 37862 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding unique_peak2_20_136_-0.320557439162029_6.93775336337951_0.898859487326522-2 chr15 74720979 74721726 + 0.898859487326522 NA exon (NM_198607, exon 1 of 2) exon (NM_198607, exon 1 of 2) 118 NM_198607 223626 Mm.268603 NM_198607 ENSMUSG00000056665 Them6 4930572J05Rik thioesterase superfamily member 6 protein-coding common_peak1_20_136_-0.320557439162029_6.93775336337951_0.898859487326522 chr12 108757675 108758058 + 0.898859487326522 NA Intergenic CpG -35445 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding unique_peak2_20_136_-0.320557439162029_6.93775336337951_0.898859487326522-3 chr5 115155718 115156828 + 0.898859487326522 NA intron (NM_175403, intron 1 of 4) B1F2|SINE|Alu 1903 NM_175403 109154 Mm.153963 NM_175403 ENSMUSG00000048578 Mlec 2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152 malectin protein-coding common_peak2_41_296_-0.210232165815912_8.10920303789281_0.89877915593579 chr13 114923569 114926122 + 0.89877915593579 NA intron (NM_008396, intron 1 of 29) URR1B|DNA|hAT-Charlie 7196 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding unique_peak2_41_296_-0.210232165815912_8.10920303789281_0.89877915593579 chr13 19218859 19220510 + 0.89877915593579 NA Intergenic Intergenic 176129 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak2_41_296_-0.210232165815912_8.10920303789281_0.89877915593579-2 chr9 44772225 44773682 + 0.89877915593579 NA promoter-TSS (NM_023831) promoter-TSS (NM_023831) -56 NM_023831 76568 Mm.278597 NM_023831 ENSMUSG00000002031 Ift46 1500035H01Rik|AA408110|AI663846|R75047|c11orf2 intraflagellar transport 46 protein-coding common_peak2_78_503_0.144819167613401_9.04968950730662_0.898648413726175 chr9 77749992 77751606 + 0.898648413726175 NA Intergenic CpG -3736 NM_010295 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding common_peak1_147_1123_0.0985819533631975_10.1837172969025_0.89862950874322 chr13 24612693 24613681 + 0.89862950874322 NA intron (NM_001286100, intron 1 of 22) intron (NM_001286100, intron 1 of 22) -1419 NM_001286101 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_269_2635_-0.0672091901037799_11.3305300599562_0.898058857889198 chr7 19628856 19630175 + 0.898058857889198 NA promoter-TSS (NM_001290457) promoter-TSS (NM_001290457) -77 NM_009046 19698 Mm.1741 NM_009046 ENSMUSG00000002983 Relb shep avian reticuloendotheliosis viral (v-rel) oncogene related B protein-coding common_peak2_205_1906_-0.0789289333496583_10.8576246616379_0.898009934786395 chr9 124099882 124109104 + 0.898009934786395 NA intron (NM_009915, intron 2 of 2) intron (NM_009915, intron 2 of 2) 2310 NM_009915 12772 Mm.6272 NM_009915 ENSMUSG00000049103 Ccr2 Cc-ckr-2|Ccr2a|Ccr2b|Ckr2|Ckr2a|Ckr2b|Cmkbr2|mJe-r chemokine (C-C motif) receptor 2 protein-coding common_peak2_63_480_-0.160415198272162_8.82968548463396_0.897888877195834 chrX 101532700 101533646 + 0.897888877195834 NA intron (NM_001290729, intron 1 of 37) intron (NM_001290729, intron 1 of 37) 438 NM_001290729 270627 Mm.261750 NM_001081008 ENSMUSG00000031314 Taf1 AU015687|B430306D02Rik|Ccg-1|Ccg1|KAT4|N-TAF1|TAFII250|Taf2a|p250 TATA-box binding protein associated factor 1 protein-coding common_peak1_90_604_0.131553710558091_9.306568187441_0.89784370413601 chr1 180640854 180642007 + 0.89784370413601 NA intron (NM_001103182, intron 1 of 14) CpG 280 NR_120498 72568 Mm.275044 NM_175186 ENSMUSG00000058729 Lin9 2700022J23Rik|Bara|Lin-9|TGS|TGS1|mLin-9 lin-9 homolog (C. elegans) protein-coding common_peak1_90_604_0.131553710558091_9.306568187441_0.89784370413601-2 chr4 32160280 32161732 + 0.89784370413601 NA Intergenic ORR1A3|LTR|ERVL-MaLR 196899 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_26_179_-0.26964552949008_7.35703033158464_0.897694374848724 chr16 4964716 4965330 + 0.897694374848724 NA promoter-TSS (NM_028301) promoter-TSS (NM_028301) 734 NR_073370 74684 Mm.374835 NM_001271586 4930451G09Rik - RIKEN cDNA 4930451G09 gene protein-coding common_peak1_16_108_-0.364648063802754_6.58586029287555_0.89763279861744-3 chr9 48818044 48818464 + 0.89763279861744 NA intron (NM_001033324, intron 2 of 6) intron (NM_001033324, intron 2 of 6) 17691 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding unique_peak2_16_108_-0.364648063802754_6.58586029287555_0.89763279861744-2 chr11 6018030 6018949 + 0.89763279861744 NA intron (NM_001174053, intron 2 of 19) intron (NM_001174053, intron 2 of 19) 47259 NM_001174054 12323 Mm.439733 NM_007595 ENSMUSG00000057897 Camk2b CaMKII calcium/calmodulin-dependent protein kinase II, beta protein-coding unique_peak2_16_108_-0.364648063802754_6.58586029287555_0.89763279861744 chr10 79780141 79781036 + 0.89763279861744 NA TTS (NM_001042710) TTS (NM_001042710) 3314 NM_031380 83554 Mm.251710 NM_031380 ENSMUSG00000020325 Fstl3 E030038F23Rik|Flrg follistatin-like 3 protein-coding common_peak1_16_108_-0.364648063802754_6.58586029287555_0.89763279861744-2 chr8 126723182 126723628 + 0.89763279861744 NA Intergenic Intergenic -129969 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_16_108_-0.364648063802754_6.58586029287555_0.89763279861744 chr1 106606982 106607428 + 0.89763279861744 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -60574 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_17_70_0.354938242367985_6.32721624068867_0.897522758654606-3 chr3 123507028 123507437 + 0.897522758654606 NA TTS (NM_008939) TTS (NM_008939) 834 NR_028573 100306957 Mm.260791 NR_028573 ENSMUSG00000092730 Snora24 ACA24 small nucleolar RNA, H/ACA box 24 snoRNA common_peak2_17_70_0.354938242367985_6.32721624068867_0.897522758654606 chr4 123904361 123904947 + 0.897522758654606 NA promoter-TSS (NM_019660) promoter-TSS (NM_019660) -359 NM_019660 56309 Mm.446553 NM_019660 ENSMUSG00000028647 Mycbp 5730488M09Rik|AW552132|AW742590|Amy-1 MYC binding protein protein-coding common_peak1_17_70_0.354938242367985_6.32721624068867_0.897522758654606-4 chr5 112263557 112264042 + 0.897522758654606 NA intron (NM_001312895, intron 4 of 5) intron (NM_001312895, intron 4 of 5) 7979 NM_001312893 12960 Mm.29488 NM_023695 ENSMUSG00000029343 Crybb1 3110006K12Rik|BB1CRY crystallin, beta B1 protein-coding common_peak1_17_70_0.354938242367985_6.32721624068867_0.897522758654606-5 chr7 101377886 101378320 + 0.897522758654606 NA promoter-TSS (NM_001040112) promoter-TSS (NM_001040112) -19 NM_001040112 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_17_70_0.354938242367985_6.32721624068867_0.897522758654606-2 chr3 95231877 95232280 + 0.897522758654606 NA exon (NM_001038708, exon 2 of 5) exon (NM_001038708, exon 2 of 5) 3135 NM_001038708 57912 Mm.28189 NM_172395 ENSMUSG00000046722 Cdc42se1 1300002M12Rik|AW558204|Cdcse1|SCIP1|Spec1 CDC42 small effector 1 protein-coding common_peak1_17_70_0.354938242367985_6.32721624068867_0.897522758654606 chr1 138132052 138132450 + 0.897522758654606 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 42875 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_23_157_-0.290005280085008_7.1587781081346_0.897241337509177-2 chr10 45000445 45000945 + 0.897241337509177 NA Intergenic Intergenic -66519 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak1_23_157_-0.290005280085008_7.1587781081346_0.897241337509177-5 chr7 80505313 80505716 + 0.897241337509177 NA intron (NM_007550, intron 5 of 21) intron (NM_007550, intron 5 of 21) 29484 NM_007550 12144 Mm.12932 NM_007550 ENSMUSG00000030528 Blm - Bloom syndrome, RecQ helicase-like protein-coding common_peak2_23_157_-0.290005280085008_7.1587781081346_0.897241337509177 chr11 52263805 52264748 + 0.897241337509177 NA intron (NM_001313981, intron 3 of 10) B1_Mus1|SINE|Alu 18319 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak1_23_157_-0.290005280085008_7.1587781081346_0.897241337509177-3 chr3 109360971 109361440 + 0.897241337509177 NA intron (NM_020505, intron 1 of 26) PB1D9|SINE|Alu 20522 NM_020505 57257 Mm.282257 NM_020505 ENSMUSG00000033721 Vav3 A530094I06Rik|AA986410|Idd18.1 vav 3 oncogene protein-coding unique_peak2_23_157_-0.290005280085008_7.1587781081346_0.897241337509177 chr1 161893568 161894753 + 0.897241337509177 NA Intergenic Intergenic -17499 NM_172645 226551 Mm.170002 NM_172645 ENSMUSG00000040297 Suco 4732491B11|AI848100|AU016931|Opt SUN domain containing ossification factor protein-coding common_peak1_23_157_-0.290005280085008_7.1587781081346_0.897241337509177 chr10 39517060 39517672 + 0.897241337509177 NA intron (NM_008054, intron 5 of 13) intron (NM_008054, intron 5 of 13) -95568 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak1_23_157_-0.290005280085008_7.1587781081346_0.897241337509177-4 chr3 155092883 155093506 + 0.897241337509177 NA promoter-TSS (NM_028938) promoter-TSS (NM_028938) 184 NM_029330 75540 Mm.35218 NM_029330 ENSMUSG00000053870 Fpgt 1700016E03Rik fucose-1-phosphate guanylyltransferase protein-coding common_peak2_108_761_0.118095048036315_9.63269471151148_0.896852343797083 chr4 119896276 119899205 + 0.896852343797083 NA intron (NM_010657, intron 1 of 8) intron (NM_010657, intron 1 of 8) 83062 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak2_125_1063_-0.10706096436305_10.0017519533197_0.896703127812109 chr14 20927807 20930864 + 0.896703127812109 NA promoter-TSS (NM_009502) promoter-TSS (NM_009502) -98 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak1_43_312_-0.203608793052311_8.18821445040646_0.89641998084401 chr10 72654844 72655515 + 0.89641998084401 NA intron (NM_001293683, intron 1 of 7) intron (NM_001293683, intron 1 of 7) 333 NM_001293683 52696 Mm.62876 NM_025635 ENSMUSG00000019923 Zwint 2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1 ZW10 interactor protein-coding common_peak2_130_962_0.105695274003414_9.96423962484517_0.896310424473731 chr9 57260731 57263094 + 0.896310424473731 NA intron (NM_028820, intron 1 of 2) CpG 687 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding common_peak1_61_463_-0.16468647920691_8.77563775552412_0.895832876322245 chr6 53589450 53590640 + 0.895832876322245 NA intron (NM_172728, intron 1 of 6) intron (NM_172728, intron 1 of 6) 16671 NM_172728 231991 Mm.227444 NM_172728 ENSMUSG00000053007 Creb5 9430076C15Rik|CRE-BPa|Crebpa|D430026C09Rik cAMP responsive element binding protein 5 protein-coding common_peak2_128_1093_-0.105535336385325_10.0426293545999_0.895586301988713 chr17 57187723 57190413 + 0.895586301988713 NA TTS (NM_019418) TTS (NM_019418) 5113 NM_019418 50930 Mm.483369 NM_019418 ENSMUSG00000005824 Tnfsf14 HVEM-L|HVEML|LIGHT|LTg|Ly113|Tnlg1d tumor necrosis factor (ligand) superfamily, member 14 protein-coding common_peak2_185_1501_0.0847599345596741_10.5950490647941_0.895149318169941 chr8 123477119 123479185 + 0.895149318169941 NA intron (NM_054070, intron 1 of 16) CpG 290 NR_028260 114896 Mm.287475 NM_054070 ENSMUSG00000031967 Afg3l1 1700047G05Rik|3110061K15Rik AFG3-like AAA ATPase 1 protein-coding common_peak2_344_3264_0.0578336306913201_11.7017840917795_0.895023584067548 chr13 5843497 5848188 + 0.895023584067548 NA Intergenic Intergenic 12250 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak2_45_328_-0.196870658455376_8.26350844450755_0.895006227217796 chr3 108653321 108654624 + 0.895006227217796 NA promoter-TSS (NM_001177770) promoter-TSS (NM_001177770) -18 NM_001177770 229725 Mm.214545 NM_145543 ENSMUSG00000027884 Clcc1 Mclc chloride channel CLIC-like 1 protein-coding common_peak2_166_1310_0.0902946354662042_10.4015992879549_0.894633640397016 chr8 107094709 107097467 + 0.894633640397016 NA promoter-TSS (NR_106043) promoter-TSS (NR_106043) 18 NR_106043 102465652 NR_106043 ENSMUSG00000098671 Mir7075 Gm27821|mmu-mir-7075 microRNA 7075 ncRNA common_peak1_79_623_-0.14104336885876_9.21488053443287_0.894622819738218 chr18 23805946 23806999 + 0.894622819738218 NA intron (NM_153058, intron 1 of 6) intron (NM_153058, intron 1 of 6) 2502 NM_153058 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak2_170_1527_-0.0887955923322892_10.5330310318696_0.894539790931536 chr7 141228027 141229801 + 0.894539790931536 NA intron (NM_001081118, intron 1 of 17) CpG 126 NM_001081118 101471 Mm.248656 NM_207211 ENSMUSG00000038611 Phrf1 AA673488 PHD and ring finger domains 1 protein-coding common_peak2_111_788_0.115907882377179_9.68183543120205_0.894483622135927 chr17 13682388 13684680 + 0.894483622135927 NA Intergenic Intergenic -77007 NM_010806 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding common_peak1_47_344_-0.19006477238708_8.33542016547199_0.894401587437464 chr7 117470289 117471303 + 0.894401587437464 NA intron (NM_175645, intron 1 of 11) intron (NM_175645, intron 1 of 11) 89817 NM_175645 233781 Mm.461427 NM_175645 ENSMUSG00000030657 Xylt1 8030490L12 xylosyltransferase 1 protein-coding common_peak2_458_4663_0.0485877362335252_12.2116459413173_0.894362328438207 chr11 87465828 87473121 + 0.894362328438207 NA intron (NM_031386, intron 2 of 30) intron (NM_031386, intron 2 of 30) 41883 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_304_2797_0.0624447907605372_11.481402642545_0.894349778882569 chr7 90442068 90444552 + 0.894349778882569 NA exon (NM_145151, exon 1 of 1) exon (NM_145151, exon 1 of 1) 529 NR_073438 233490 Mm.29496 NM_145151 ENSMUSG00000051451 Crebzf 1110034C16Rik|6330417B10Rik|LAZip|LAZipII|SMILE|Zf CREB/ATF bZIP transcription factor protein-coding common_peak2_39_207_0.217306820676041_7.80909312847911_0.894071015145763 chr1 127250976 127252414 + 0.894071015145763 NA intron (NM_145128, intron 2 of 17) intron (NM_145128, intron 2 of 17) 46709 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_122_888_0.109538172388941_9.85080869502424_0.893833996975657 chr3 41564730 41566323 + 0.893833996975657 NA intron (NM_001130186, intron 1 of 10) CpG 646 NM_001130186 269424 Mm.286285 NM_172303 ENSMUSG00000025764 Jade1 AU041499|D530048A03Rik|Phf17|mKIAA1807 jade family PHD finger 1 protein-coding common_peak2_120_1013_-0.109275092367893_9.9312043908194_0.893680919921119 chr1 172082045 172083558 + 0.893680919921119 NA promoter-TSS (NM_021607) promoter-TSS (NM_021607) -52 NM_021607 59287 Mm.218203 NM_021607 ENSMUSG00000003458 Ncstn 9430068N19Rik|AA727311|Aph2|D1Dau13e|Kiaa0253|Nct|mKIAA0253 nicastrin protein-coding common_peak2_55_411_-0.173323465978937_8.59983879419375_0.893495252236747 chr6 130229553 130231799 + 0.893495252236747 NA intron (NM_014194, intron 1 of 6) intron (NM_014194, intron 1 of 6) 1011 NM_014194 16638 Mm.441781 NM_014194 ENSMUSG00000067599 Klra7 LGL-1|Ly-49G.1|Ly-49G.2|Ly-49G.3|Ly49G.4|Ly49g|Ly49g1|Ly49g2 killer cell lectin-like receptor, subfamily A, member 7 protein-coding common_peak2_53_394_-0.176888965038515_8.53726436054521_0.893213557924631 chr17 21707134 21708445 + 0.893213557924631 NA promoter-TSS (NM_001008501) promoter-TSS (NM_001008501) 48 NM_001008501 240034 Mm.34723 NM_001008501 ENSMUSG00000067928 Zfp760 9430018I06|BC029103 zinc finger protein 760 protein-coding common_peak1_53_394_-0.176888965038515_8.53726436054521_0.893213557924631 chr7 80025887 80026794 + 0.893213557924631 NA 5' UTR (NM_175433, exon 1 of 5) 5' UTR (NM_175433, exon 1 of 5) 112 NM_175433 209225 Mm.290925 NM_175433 ENSMUSG00000048897 Zfp710 5430400N05Rik|9830165K13|AI324798|Znf710 zinc finger protein 710 protein-coding common_peak2_151_1163_0.0953257940476746_10.2325382399321_0.893041657425755 chr11 85138807 85141076 + 0.893041657425755 NA promoter-TSS (NM_001029934) promoter-TSS (NM_001029934) 14 NM_001029934 237898 Mm.178524 NM_001029934 ENSMUSG00000000804 Usp32 2900074J03Rik|6430526O11Rik|AW045245 ubiquitin specific peptidase 32 protein-coding common_peak1_104_857_-0.119253606822726_9.68520703408818_0.893041529284761 chr17 40933950 40935218 + 0.893041529284761 NA promoter-TSS (NM_008650) promoter-TSS (NM_008650) -33 NM_031863 83815 Mm.9870 NM_031863 ENSMUSG00000023919 Cenpq 2610528M18Rik centromere protein Q protein-coding common_peak2_140_1214_-0.0994749949138409_10.1970031010362_0.893028016185314 chr10 26373102 26376400 + 0.893028016185314 NA intron (NM_172787, intron 1 of 21) CpG 434 NM_172787 237339 Mm.338439 NM_172787 ENSMUSG00000039089 L3mbtl3 AI481284|MBT-1 l(3)mbt-like 3 (Drosophila) protein-coding common_peak2_161_1432_-0.0918685000829118_10.4388886442207_0.892984058930255 chr5 142366663 142368788 + 0.892984058930255 NA Intergenic CpG -33772 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf forkhead box K1 protein-coding common_peak1_49_361_-0.187218383760465_8.40623669520297_0.892744358038637 chr4 101261800 101262857 + 0.892744358038637 NA intron (NM_146145, intron 1 of 24) B3|SINE|B2 2954 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_65_399_0.160076069072511_8.72389422431098_0.892727415366575 chr7 29179970 29180539 + 0.892727415366575 NA intron (NM_026545, intron 1 of 6) intron (NM_026545, intron 1 of 6) 419 NM_026545 57296 Mm.273152 NM_026545 ENSMUSG00000030591 Psmd8 6720456J22Rik|AA407360|AL033291|AL033322|AL033323|C76433 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 protein-coding common_peak1_31_217_-0.245318750465402_7.64552494954422_0.891406515112927-2 chr16 4913243 4913851 + 0.891406515112927 NA intron (NM_029657, intron 4 of 16) intron (NM_029657, intron 4 of 16) -25564 NM_001316715 66911 Mm.428698 NM_025839 ENSMUSG00000022516 Nudt16l1 1110001K21Rik|5330437I08Rik|Sdos nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 protein-coding unique_peak2_31_217_-0.245318750465402_7.64552494954422_0.891406515112927 chr6 134071918 134073234 + 0.891406515112927 NA intron (NM_001303102, intron 2 of 8) intron (NM_001303102, intron 2 of 8) 36876 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak1_31_217_-0.245318750465402_7.64552494954422_0.891406515112927 chr13 93813715 93814430 + 0.891406515112927 NA intron (NM_009712, intron 4 of 7) intron (NM_009712, intron 4 of 7) 23295 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak1_241_2092_0.0718225595660957_11.0672678760388_0.891214705281145 chr13 51644209 51646366 + 0.891214705281145 NA promoter-TSS (NM_025415) promoter-TSS (NM_025415) 55 NM_025415 66197 Mm.222228 NM_025415 ENSMUSG00000062248 Cks2 1110038L14Rik|CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding common_peak2_94_762_-0.127069456559319_9.51200451855487_0.891122187739355 chr11 120436756 120438271 + 0.891122187739355 NA exon (NM_199469, exon 1 of 16) exon (NM_199469, exon 1 of 16) 187 NM_001195023 217365 Mm.309520 NM_199469 ENSMUSG00000039703 Nploc4 AK129375|Npl4|mKIAA1499 NPL4 homolog, ubiquitin recognition factor protein-coding common_peak1_187_1709_-0.0834248999745295_10.698068159786_0.890864750741675 chr2 3729497 3732386 + 0.890864750741675 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 17483 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_234_2016_0.0732413056913739_11.0146160214587_0.890719049820559 chr1 79750084 79752486 + 0.890719049820559 NA intron (NM_001111279, intron 1 of 11) intron (NM_001111279, intron 1 of 11) 10484 NM_001111279 69368 Mm.293273 NM_027057 ENSMUSG00000073643 Wdfy1 1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435 WD repeat and FYVE domain containing 1 protein-coding unique_peak2_41_221_0.209671088634749_7.89925141066748_0.890338523006183 chr3 146776232 146777684 + 0.890338523006183 NA intron (NM_011100, intron 1 of 9) intron (NM_011100, intron 1 of 9) 4458 NM_001164200 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak2_109_770_0.117316279657237_9.64924518974365_0.89017059993084 chr17 34626495 34628798 + 0.89017059993084 NA promoter-TSS (NM_019441) promoter-TSS (NM_019441) -211 NM_001302396 54397 Mm.373627 NM_019441 ENSMUSG00000015474 Ppt2 0610007M19Rik|AA672937 palmitoyl-protein thioesterase 2 protein-coding common_peak2_256_2256_0.0694109459648402_11.1748961761743_0.890165245431466 chr15 66809879 66816407 + 0.890165245431466 NA intron (NM_009192, intron 1 of 8) intron (NM_009192, intron 1 of 8) 18686 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_34_173_0.238502218674806_7.56219460518613_0.889985375888846 chr2 119972214 119973054 + 0.889985375888846 NA promoter-TSS (NM_011941) promoter-TSS (NM_011941) -65 NM_011941 26390 Mm.330501 NM_011941 ENSMUSG00000033902 Mapkbp1 2810483F24Rik|AW123212|JNKBP-1|Jnkbp1|mKIAA0596 mitogen-activated protein kinase binding protein 1 protein-coding common_peak1_34_173_0.238502218674806_7.56219460518613_0.889985375888846 chr8 77452227 77452864 + 0.889985375888846 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -64511 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak2_168_1505_-0.0886922061425182_10.5121599516007_0.889968553766815 chr11 109858926 109861324 + 0.889968553766815 NA Intergenic Intergenic 14247 NR_045909 73257 Mm.250442 NR_045909 ENSMUSG00000087393 1700023C21Rik - RIKEN cDNA 1700023C21 gene ncRNA common_peak1_302_2774_0.0627106536339106_11.4696273829418_0.889732743965741 chr2 166649964 166652786 + 0.889732743965741 NA intron (NM_177782, intron 1 of 39) intron (NM_177782, intron 1 of 39) -21343 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_91_613_0.129590581096044_9.3268901359182_0.889477743340708 chr19 47132014 47133918 + 0.889477743340708 NA exon (NM_133746, exon 3 of 3) exon (NM_133746, exon 3 of 3) 5328 NM_133746 72691 Mm.31663 NM_133746 ENSMUSG00000033033 Calhm2 2810048G17Rik|Fam26b calcium homeostasis modulator 2 protein-coding common_peak2_261_2541_-0.0680487419717295_11.2777239440191_0.889471206022505 chr4 135351857 135354667 + 0.889471206022505 NA promoter-TSS (NM_001130477) promoter-TSS (NM_001130477) -48 NM_001130477 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak1_194_1785_-0.0814673286350427_10.7617827008037_0.889398583356671 chr16 18876058 18878423 + 0.889398583356671 NA promoter-TSS (NM_010922) promoter-TSS (NM_010922) 490 NM_010435 15260 Mm.15694 NM_010435 ENSMUSG00000022702 Hira AA138857|D16Ertd95e|Gm15797|N28177|OTTMUSG00000026264|Tuple1 histone cell cycle regulator protein-coding common_peak1_75_586_-0.143627867340449_9.12540275943983_0.889334463056735 chr11 79339010 79340138 + 0.889334463056735 NA promoter-TSS (NM_010897) promoter-TSS (NM_010897) -318 NM_010897 18015 Mm.255596 NM_010897 ENSMUSG00000020716 Nf1 AW494271|Dsk9|E030030H24Rik|Mhdadsk9|Nf-1 neurofibromin 1 protein-coding common_peak1_132_1133_-0.103304612279867_10.0955526188023_0.889303924015398 chr9 79970319 79972324 + 0.889303924015398 NA intron (NM_001081243, intron 1 of 5) intron (NM_001081243, intron 1 of 5) 6561 NM_001081243 70598 Mm.23049 NM_001081243 ENSMUSG00000034898 Filip1 5730485H21Rik|AI843021 filamin A interacting protein 1 protein-coding common_peak1_29_141_0.258909313093021_7.27920177605119_0.889089178530884 chr3 149326180 149326865 + 0.889089178530884 NA Intergenic Lx5c|LINE|L1 51785 NR_040591 381482 Mm.393866 NR_040591 Gm1653 - predicted gene 1653 ncRNA common_peak1_29_141_0.258909313093021_7.27920177605119_0.889089178530884-3 chr8 13869318 13870007 + 0.889089178530884 NA promoter-TSS (NM_181854) promoter-TSS (NM_181854) 21 NM_181854 101994 Mm.289346 NM_181854 ENSMUSG00000047710 Champ1 AA675043|AI116001|D8Ertd457e|D8Ertd569e|Zfp828|Znf828|mKIAA1802 chromosome alignment maintaining phosphoprotein 1 protein-coding common_peak2_29_141_0.258909313093021_7.27920177605119_0.889089178530884 chr19 58193494 58194513 + 0.889089178530884 NA Intergenic Intergenic -102201 NR_040449 791347 Mm.452208 NR_040449 Gm10007 ENSMUSG00000056739 predicted gene 10007 ncRNA unique_peak2_29_141_0.258909313093021_7.27920177605119_0.889089178530884 chr19 44068894 44069953 + 0.889089178530884 NA 5' UTR (NM_145502, exon 1 of 11) 5' UTR (NM_145502, exon 1 of 11) 263 NM_145502 226144 Mm.279865 NM_145502 ENSMUSG00000025198 Erlin1 2810439N09Rik|C80197|Keo4|Spfh1 ER lipid raft associated 1 protein-coding common_peak1_29_141_0.258909313093021_7.27920177605119_0.889089178530884-2 chr5 134588955 134589584 + 0.889089178530884 NA intron (NM_020022, intron 3 of 10) B3|SINE|B2 6579 NM_020022 19718 Mm.332739 NM_020022 ENSMUSG00000023104 Rfc2 2610008M13Rik|40kDa|AI326953|Recc2 replication factor C (activator 1) 2 protein-coding common_peak1_66_506_-0.155298236853618_8.90819281857653_0.889027279202339 chr1 133698130 133698898 + 0.889027279202339 NA Intergenic URR1B|DNA|hAT-Charlie -8406 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding common_peak1_180_1451_0.0853815774806108_10.5465165267361_0.888983870802753 chr14 20082022 20084031 + 0.888983870802753 NA exon (NM_026209, exon 1 of 2) exon (NM_026209, exon 1 of 2) 146 NM_026209 67509 Mm.292423 NM_026209 ENSMUSG00000045107 Saysd1 1810063B07Rik|4930488P03Rik SAYSVFN motif domain containing 1 protein-coding common_peak1_61_368_0.165817509860267_8.61038576099053_0.888944208002475 chr14 119007087 119008289 + 0.888944208002475 NA intron (NM_001081252, intron 33 of 38) intron (NM_001081252, intron 33 of 38) 69756 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding common_peak2_61_368_0.165817509860267_8.61038576099053_0.888944208002475 chr11 5260898 5262206 + 0.888944208002475 NA promoter-TSS (NM_032396) promoter-TSS (NM_032396) 58 NM_032396 84035 Mm.209989 NM_032396 ENSMUSG00000020393 Kremen1 AV002070|Kremen|Krm1 kringle containing transmembrane protein 1 protein-coding common_peak2_243_2333_-0.0708447722876659_11.1531664595635_0.888458320327358 chr16 76370276 76374473 + 0.888458320327358 NA intron (NM_173440, intron 1 of 3) CpG 675 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak2_112_797_0.115274561950056_9.69788221719737_0.888048946235589 chr9 46272377 46274165 + 0.888048946235589 NA exon (NM_011752, exon 1 of 14) exon (NM_011752, exon 1 of 14) 207 NM_011752 22687 Mm.17519 NM_011752 ENSMUSG00000032078 Zpr1 AI303781|Zfp259|Znf259 ZPR1 zinc finger protein-coding common_peak1_112_797_0.115274561950056_9.69788221719737_0.888048946235589 chr8 126584516 126586444 + 0.888048946235589 NA Intergenic B1_Mur4|SINE|Alu 7956 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak1_104_726_0.119768676757225_9.56569589229821_0.887903005187121 chr7 127195338 127196780 + 0.887903005187121 NA promoter-TSS (NM_027353) promoter-TSS (NM_027353) 18 NM_001285907 70233 Mm.28050 NM_027353 ENSMUSG00000042502 Cd2bp2 1500011B02Rik|2410024K20Rik|AW048183 CD2 antigen (cytoplasmic tail) binding protein 2 protein-coding common_peak2_208_1939_-0.0780953205497479_10.8827932767996_0.887575686637509 chr14 26578681 26580736 + 0.887575686637509 NA exon (NM_145969, exon 1 of 18) exon (NM_145969, exon 1 of 18) 158 NM_145969 211922 Mm.260512 NM_145969 ENSMUSG00000040818 Dennd6a Fam116a DENN/MADD domain containing 6A protein-coding common_peak2_92_743_-0.128342090220441_9.47498776599781_0.887390893494723 chr9 73054435 73056695 + 0.887390893494723 NA intron (NM_023635, intron 1 of 5) intron (NM_023635, intron 1 of 5) -8583 NM_001301232 11891 Mm.34867 NM_023635 ENSMUSG00000032202 Rab27a 2210402C08Rik|2410003M20Rik|4933437C11Rik|ash RAB27A, member RAS oncogene family protein-coding common_peak1_198_1829_-0.0806461393239868_10.7973048635094_0.886913584674539 chr10 68540545 68542702 + 0.886913584674539 NA intron (NM_028491, intron 1 of 7) intron (NM_028491, intron 1 of 7) 252 NM_028491 73287 Mm.141830 NM_028491 ENSMUSG00000019945 1700040L02Rik - RIKEN cDNA 1700040L02 gene protein-coding common_peak1_57_337_0.174396189416742_8.48807753099056_0.886908242482982 chr4 43030732 43031484 + 0.886908242482982 NA exon (NM_023231, exon 2 of 10) exon (NM_023231, exon 2 of 10) 276 NM_023231 66592 Mm.331565 NM_023231 ENSMUSG00000028455 Stoml2 0610038F01Rik|MSLP2|SLP-2 stomatin (Epb7.2)-like 2 protein-coding common_peak2_59_353_0.167663193701063_8.55143714693353_0.886897736412479 chr19 3935093 3936556 + 0.886897736412479 NA exon (NM_001161428, exon 2 of 10) exon (NM_001161428, exon 2 of 10) 638 NM_001161428 54445 Mm.262094 NM_019449 ENSMUSG00000036908 Unc93b1 Unc-93B1|Unc93b unc-93 homolog B1 (C. elegans) protein-coding common_peak1_59_353_0.167663193701063_8.55143714693353_0.886897736412479 chr3 37313504 37314435 + 0.886897736412479 NA intron (NM_001255992, intron 1 of 1) intron (NM_001255992, intron 1 of 1) 1415 NM_001255992 241950 Mm.32171 NM_001008502 ENSMUSG00000051444 Bbs12 Gm1805|Gm407|Gm721 Bardet-Biedl syndrome 12 (human) protein-coding unique_peak2_45_249_0.199288830617778_8.06542869997098_0.886522185727299-2 chr5 72202703 72204043 + 0.886522185727299 NA promoter-TSS (NM_153389) promoter-TSS (NM_153389) 30 NM_153389 231287 Mm.32775 NM_153389 ENSMUSG00000046808 Atp10d 9830145H18Rik|ATPVD|D5Buc24e ATPase, class V, type 10D protein-coding unique_peak2_45_249_0.199288830617778_8.06542869997098_0.886522185727299 chr2 126635694 126637664 + 0.886522185727299 NA intron (NM_001271469, intron 3 of 3) intron (NM_001271469, intron 3 of 3) -18001 NM_008230 15186 Mm.18603 NM_008230 ENSMUSG00000027360 Hdc AW108189|Hdc-a|Hdc-c|Hdc-e|Hdc-s histidine decarboxylase protein-coding common_peak2_45_249_0.199288830617778_8.06542869997098_0.886522185727299 chrX 7318489 7319421 + 0.886522185727299 NA intron (NM_001243762, intron 1 of 13) CpG 403 NM_001243762 12728 Mm.486257 NM_016691 ENSMUSG00000004317 Clcn5 5430408K11Rik|ClC-5|Clc4-1|Clc5|Clcn4-1|D930009B12Rik|DXImx42e|Sfc13|T25545 chloride channel, voltage-sensitive 5 protein-coding common_peak1_15_101_-0.376172078846327_6.48433930254833_0.88637726057726-2 chr13 25020432 25020897 + 0.88637726057726 NA promoter-TSS (NM_001013389) promoter-TSS (NM_001013389) -347 NM_001013389 380836 Mm.387097 NM_001013389 ENSMUSG00000021339 Mrs2 Gm902|HPT|Mrs2l|RPT MRS2 magnesium transporter protein-coding common_peak1_15_101_-0.376172078846327_6.48433930254833_0.88637726057726 chr11 109330337 109330787 + 0.88637726057726 NA Intergenic Intergenic -16305 NR_027883 67927 Mm.394490 NR_027883 ENSMUSG00000099630 1700096J18Rik - RIKEN cDNA 1700096J18 gene ncRNA unique_peak2_15_101_-0.376172078846327_6.48433930254833_0.88637726057726 chr7 17539630 17540590 + 0.88637726057726 NA Intergenic MMVL30-int|LTR|ERV1 -132203 NR_002857 232919 Mm.153893 NR_002857 ENSMUSG00000108558 Psg-ps1 AV036018|Cea-6|Cea6 pregnancy specific glycoprotein pseudogene 1 pseudo common_peak1_15_101_-0.376172078846327_6.48433930254833_0.88637726057726-4 chr9 56534307 56534697 + 0.88637726057726 NA Intergenic Intergenic 101146 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding unique_peak2_15_101_-0.376172078846327_6.48433930254833_0.88637726057726-2 chr7 24380006 24380674 + 0.88637726057726 NA intron (NM_008433, intron 4 of 8) intron (NM_008433, intron 4 of 8) 10077 NM_008433 16534 Mm.9911 NM_008433 ENSMUSG00000054342 Kcnn4 IK1|IKCA1|KCA4|KCa3.1|SK4|SKCas|mIKCa1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 protein-coding common_peak1_15_101_-0.376172078846327_6.48433930254833_0.88637726057726-3 chr4 119320065 119320463 + 0.88637726057726 NA intron (NM_028677, intron 1 of 9) CpG 259 NM_001110129 66101 Mm.304080 NM_028677 ENSMUSG00000060288 Ppih 1100001J08Rik|2010111B15Rik|4833408F11Rik|AI464484|CYP-20|CYPH|D4Wsu43e peptidyl prolyl isomerase H protein-coding common_peak1_28_194_-0.258666999237042_7.47799681413109_0.886300419961429-2 chr18 30272764 30273409 + 0.886300419961429 NA intron (NM_181414, intron 1 of 24) CpG 190 NM_181414 225326 Mm.194127 NM_181414 ENSMUSG00000033628 Pik3c3 5330434F23Rik|Vps34 phosphoinositide-3-kinase, class 3 protein-coding unique_peak2_28_194_-0.258666999237042_7.47799681413109_0.886300419961429 chr17 35516443 35517478 + 0.886300419961429 NA promoter-TSS (NM_146248) promoter-TSS (NM_146248) -136 NM_025674 106795 Mm.11434 NM_025674 ENSMUSG00000050410 Tcf19 5730403J10Rik|AW495861 transcription factor 19 protein-coding common_peak1_28_194_-0.258666999237042_7.47799681413109_0.886300419961429-3 chr2 128125307 128125740 + 0.886300419961429 NA promoter-TSS (NM_207681) promoter-TSS (NM_207681) -515 NM_207681 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak1_28_194_-0.258666999237042_7.47799681413109_0.886300419961429 chr1 166047645 166048284 + 0.886300419961429 NA Intergenic Intergenic -45330 NM_011137 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding common_peak2_28_194_-0.258666999237042_7.47799681413109_0.886300419961429 chr13 75845089 75846349 + 0.886300419961429 NA intron (NM_053108, intron 1 of 2) intron (NM_053108, intron 1 of 2) 5833 NM_053108 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak1_28_194_-0.258666999237042_7.47799681413109_0.886300419961429-4 chr6 120493413 120493995 + 0.886300419961429 NA exon (NM_033567, exon 1 of 1) exon (NM_033567, exon 1 of 1) 103 NM_033567 94047 Mm.23088 NM_033567 ENSMUSG00000094626 Cecr6 AW048664 cat eye syndrome chromosome region, candidate 6 protein-coding common_peak1_26_122_0.279693061500355_7.08236103608942_0.886134329387036-2 chr17 26916970 26917596 + 0.886134329387036 NA exon (NM_053173, exon 1 of 11) exon (NM_053173, exon 1 of 11) 192 NM_053173 16580 Mm.491138 NM_016761 ENSMUSG00000024301 Kifc5b Hset|KNSL2|Kifc5a kinesin family member C5B protein-coding common_peak1_26_122_0.279693061500355_7.08236103608942_0.886134329387036 chr1 173598713 173599168 + 0.886134329387036 NA intron (NM_001177349, intron 1 of 3) intron (NM_001177349, intron 1 of 3) 334 NM_001177349 623121 Mm.138449 NM_001033384 ENSMUSG00000073491 Ifi213 E030037K03Rik|E430029J22Rik|Pydc4|Pyr-A interferon activated gene 213 protein-coding unique_peak2_26_122_0.279693061500355_7.08236103608942_0.886134329387036 chr17 71190246 71191496 + 0.886134329387036 NA intron (NM_022882, intron 1 of 19) intron (NM_022882, intron 1 of 19) 6893 NM_022882 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding unique_peak2_26_122_0.279693061500355_7.08236103608942_0.886134329387036-2 chr4 3745778 3746872 + 0.886134329387036 NA intron (NM_010747, intron 6 of 12) intron (NM_010747, intron 6 of 12) 31361 NR_028126 70720 Mm.445696 NR_028126 6330407A03Rik - RIKEN cDNA 6330407A03 gene ncRNA common_peak2_80_632_-0.139719606435463_9.23620188621061_0.885763925593976 chr11 75926063 75928284 + 0.885763925593976 NA Intergenic L1M4|LINE|L1 -1282 NM_001291159 380714 Mm.425697 NM_029548 ENSMUSG00000020847 Rph3al Gm1753|Noc2 rabphilin 3A-like (without C2 domains) protein-coding common_peak2_89_596_0.131203827486182_9.2871890350079_0.88562652482196 chr14 104336872 104337149 + 0.88562652482196 NA Intergenic (CGGAA)n|Simple_repeat|Simple_repeat 130989 NM_011143 18996 Mm.246550 NM_011143 ENSMUSG00000048349 Pou4f1 Brn-3|Brn-3.0|Brn3|Brn3.0|Brn3a|E130119J07Rik POU domain, class 4, transcription factor 1 protein-coding common_peak1_94_639_0.12654169538785_9.38519894258129_0.885478631765554 chr15 10469677 10470801 + 0.885478631765554 NA intron (NM_030046, intron 1 of 11) CpG 277 NM_030046 78244 Mm.297862 NM_030046 ENSMUSG00000044224 Dnajc21 4930461P20Rik|9930116P15Rik DnaJ heat shock protein family (Hsp40) member C21 protein-coding unique_peak2_20_87_0.318043025161201_6.6184531312179_0.885462932858989-3 chrX 95658348 95659084 + 0.885462932858989 NA promoter-TSS (NM_001003916) promoter-TSS (NM_001003916) -207 NM_001003916 245522 Mm.336158 NM_001003916 ENSMUSG00000035062 Zc4h2 Gm372|mKIAA1166 zinc finger, C4H2 domain containing protein-coding common_peak1_20_87_0.318043025161201_6.6184531312179_0.885462932858989-6 chr7 139225136 139225504 + 0.885462932858989 NA intron (NM_001143755, intron 6 of 8) intron (NM_001143755, intron 6 of 8) -12013 NM_001162540 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding common_peak1_20_87_0.318043025161201_6.6184531312179_0.885462932858989-5 chr7 66141149 66141677 + 0.885462932858989 NA intron (NM_001081163, intron 2 of 2) L1MC3|LINE|L1 31898 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_20_87_0.318043025161201_6.6184531312179_0.885462932858989 chr3 69440982 69441630 + 0.885462932858989 NA intron (NM_178726, intron 1 of 3) intron (NM_178726, intron 1 of 3) 124388 NM_178726 242083 Mm.40577 NM_178726 ENSMUSG00000027784 Ppm1l 3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175 protein phosphatase 1 (formerly 2C)-like protein-coding common_peak1_20_87_0.318043025161201_6.6184531312179_0.885462932858989-7 chr8 46920605 46920985 + 0.885462932858989 NA Intergenic Intergenic -66130 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak1_20_87_0.318043025161201_6.6184531312179_0.885462932858989-3 chr2 6715467 6716039 + 0.885462932858989 NA intron (NM_001310447, intron 1 of 11) intron (NM_001310447, intron 1 of 11) 5909 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding unique_peak2_20_87_0.318043025161201_6.6184531312179_0.885462932858989-2 chr8 121301029 121301843 + 0.885462932858989 NA Intergenic Intergenic 173751 NM_008024 14241 Mm.5111 NM_008024 ENSMUSG00000097084 Foxl1 FREAC7|Fkh6|fkh-6 forkhead box L1 protein-coding common_peak1_20_87_0.318043025161201_6.6184531312179_0.885462932858989-4 chr2 29642397 29642945 + 0.885462932858989 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 22951 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_20_87_0.318043025161201_6.6184531312179_0.885462932858989-2 chr17 51408044 51408487 + 0.885462932858989 NA intron (NR_037250, intron 3 of 4) intron (NR_037250, intron 3 of 4) 40004 NR_046166 328837 Mm.236143 NR_046166 C330011F03Rik C330011F03 RIKEN cDNA C330011F03 gene ncRNA common_peak1_20_87_0.318043025161201_6.6184531312179_0.885462932858989 chr15 12565268 12565843 + 0.885462932858989 NA intron (NM_001081064, intron 1 of 23) intron (NM_001081064, intron 1 of 23) 27001 NM_001081064 68070 Mm.423205 NM_001081064 ENSMUSG00000022197 Pdzd2 4930537L06Rik|A930022H17Rik|Gm21706|Gm82|Pdzk3|mKIAA0300 PDZ domain containing 2 protein-coding unique_peak2_20_87_0.318043025161201_6.6184531312179_0.885462932858989 chr17 87312723 87313528 + 0.885462932858989 NA intron (NM_028639, intron 5 of 19) intron (NM_028639, intron 5 of 19) 30239 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak1_33_232_-0.234037572493753_7.7471673584074_0.885412398425669-2 chr10 8197876 8198588 + 0.885412398425669 NA Intergenic C-rich|Low_complexity|Low_complexity -242109 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_33_232_-0.234037572493753_7.7471673584074_0.885412398425669 chr1 191598726 191599500 + 0.885412398425669 NA intron (NM_178632, intron 7 of 19) intron (NM_178632, intron 7 of 19) 23477 NM_001306204 77065 Mm.338175 NM_178632 ENSMUSG00000037461 Ints7 5930412E23Rik|int7 integrator complex subunit 7 protein-coding common_peak1_53_307_0.182033337331049_8.35780320936043_0.885343801052645 chr9 80080396 80081314 + 0.885343801052645 NA intron (NM_001311110, intron 1 of 23) intron (NM_001311110, intron 1 of 23) 13952 NM_146003 215351 Mm.28232 NM_146003 ENSMUSG00000034252 Senp6 2810017C20Rik|E130319N12Rik|Susp1|mKIAA0797 SUMO/sentrin specific peptidase 6 protein-coding common_peak2_107_753_0.117011475943643_9.61692645124048_0.885185968250119 chr13 113548075 113550737 + 0.885185968250119 NA Intergenic ORR1B1|LTR|ERVL-MaLR -46562 NR_045501 70917 Mm.491036 NR_045501 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak2_62_471_-0.161033889410058_8.80212610465681_0.885164899664018 chr6 29272026 29273278 + 0.885164899664018 NA promoter-TSS (NM_023516) promoter-TSS (NM_023516) 26 NM_023516 69573 Mm.45161 NM_023516 ENSMUSG00000043421 Hilpda 2310016C08Rik|AW049004|Hig2 hypoxia inducible lipid droplet associated protein-coding common_peak1_202_1872_-0.0789357604650061_10.8316673040105_0.884986608203323 chr5 113624974 113628365 + 0.884986608203323 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 23721 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak2_85_677_-0.132801981696039_9.33874047228833_0.884930584885545 chr4 135919923 135921683 + 0.884930584885545 NA promoter-TSS (NM_024243) promoter-TSS (NM_024243) 77 NM_024243 71665 Mm.439940 NM_024243 ENSMUSG00000028673 Fuca1 0610006A03Rik|9530055J05Rik|Afuc|Fuca fucosidase, alpha-L- 1, tissue protein-coding common_peak1_300_2752_0.0624743849238598_11.4580260870575_0.884908132792966 chr2 167502981 167505965 + 0.884908132792966 NA intron (NM_030743, intron 3 of 7) intron (NM_030743, intron 3 of 7) -11599 NM_170756 263876 Mm.34342 NM_170756 ENSMUSG00000047030 Spata2 AI504642|mKIAA0757 spermatogenesis associated 2 protein-coding common_peak2_23_104_0.299529950425972_6.86401049287911_0.884629301985528 chrX 48462300 48463208 + 0.884629301985528 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 378 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak1_23_104_0.299529950425972_6.86401049287911_0.884629301985528 chrX 57053880 57054423 + 0.884629301985528 NA exon (NM_028242, exon 2 of 10) exon (NM_028242, exon 2 of 10) 317 NM_029371 72459 Mm.2152 NM_028242 ENSMUSG00000067873 Htatsf1 1600023H17Rik|2600017A12Rik|2700077B20Rik|TAT-SF1 HIV TAT specific factor 1 protein-coding unique_peak2_23_104_0.299529950425972_6.86401049287911_0.884629301985528-2 chr4 101234357 101235133 + 0.884629301985528 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 30537 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding unique_peak2_23_104_0.299529950425972_6.86401049287911_0.884629301985528 chr10 41604633 41605556 + 0.884629301985528 NA exon (NM_001303469, exon 2 of 21) exon (NM_001303469, exon 2 of 21) 1501 NM_001303469 75973 Mm.228517 NM_029493 ENSMUSG00000075225 Ccdc162 5033413D22Rik|Ccdc162p|Gm29096|Gm61|Gm6976 coiled-coil domain containing 162 protein-coding common_peak2_132_982_0.10285270632178_9.99247395950147_0.884621614221387 chr11 97765739 97767458 + 0.884621614221387 NA promoter-TSS (NM_026186) promoter-TSS (NM_026186) 15 NM_026186 67480 Mm.33206 NM_026186 ENSMUSG00000018541 Cwc25 1300013D05Rik|AA473636|Ccdc49|R75228 CWC25 spliceosome-associated protein protein-coding common_peak1_163_1452_-0.0901511001947028_10.4597434375355_0.884575912109926 chr11 107456726 107458310 + 0.884575912109926 NA intron (NM_145823, intron 1 of 9) RMER6A|LTR|ERVK 13202 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_163_1452_-0.0901511001947028_10.4597434375355_0.884575912109926 chr3 152191456 152194512 + 0.884575912109926 NA intron (NM_027287, intron 2 of 3) intron (NM_027287, intron 2 of 3) 861 NM_025926 67035 Mm.46746 NM_025926 ENSMUSG00000028035 Dnajb4 1700029A20Rik|2010306G19Rik|5730460G06Rik DnaJ heat shock protein family (Hsp40) member B4 protein-coding common_peak2_49_278_0.188506191493554_8.21837440757596_0.884414026490555 chr13 91090815 91092014 + 0.884414026490555 NA intron (NM_025770, intron 3 of 7) intron (NM_025770, intron 3 of 7) 132573 NM_025770 66795 Mm.235385 NM_025770 ENSMUSG00000021619 Atg10 5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l autophagy related 10 protein-coding common_peak2_118_852_0.110670438921353_9.79173715077897_0.884278240001731 chr11 100618687 100620504 + 0.884278240001731 NA exon (NM_019795, exon 1 of 14) exon (NM_019795, exon 1 of 14) 573 NM_019795 56354 Mm.402409 NM_019795 ENSMUSG00000014195 Dnajc7 2010003F24Rik|2010004G07Rik|CCRP|Ttc2|mDj11|mTpr2 DnaJ heat shock protein family (Hsp40) member C7 protein-coding common_peak2_135_1010_0.101805912630226_10.0324702382181_0.884187164059899 chr11 86605660 86608836 + 0.884187164059899 NA exon (NM_029478, exon 9 of 12) exon (NM_029478, exon 9 of 12) -23090 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_208_1740_0.0780451288736419_10.8047230520879_0.883965415396366 chr11 62602014 62603933 + 0.883965415396366 NA promoter-TSS (NR_028550) promoter-TSS (NR_028550) 96 NR_030738 69221 Mm.270874 NR_030738 ENSMUSG00000086841 2410006H16Rik - RIKEN cDNA 2410006H16 gene ncRNA common_peak1_68_423_0.154674865683596_8.805257887405_0.883858262118334 chr16 20516824 20517689 + 0.883858262118334 NA exon (NM_007889, exon 1 of 15) exon (NM_007889, exon 1 of 15) 192 NM_007889 13544 Mm.247259 NM_007889 ENSMUSG00000003233 Dvl3 - dishevelled segment polarity protein 3 protein-coding common_peak1_78_613_-0.139995754256862_9.19209696824175_0.883281271068049 chr4 141793629 141794422 + 0.883281271068049 NA intron (NM_001277932, intron 1 of 7) CpG 413 NM_001277932 12371 Mm.88829 NM_015733 ENSMUSG00000028914 Casp9 AI115399|APAF-3|AW493809|CASP-9|Caspase-9|ICE-LAP6|Mch6 caspase 9 protein-coding common_peak2_36_187_0.225194799533773_7.66718625144452_0.882683879450632-2 chr7 27594828 27596276 + 0.882683879450632 NA intron (NM_001110208, intron 1 of 13) B1_Mur1|SINE|Alu 3992 NM_001110208 11652 Mm.177194 NM_007434 ENSMUSG00000004056 Akt2 2410016A19Rik|AW554154|PKB|PKBbeta thymoma viral proto-oncogene 2 protein-coding common_peak2_36_187_0.225194799533773_7.66718625144452_0.882683879450632 chr11 79129098 79130167 + 0.882683879450632 NA intron (NM_013571, intron 1 of 17) intron (NM_013571, intron 1 of 17) 16722 NM_013571 16706 Mm.4745 NM_013571 ENSMUSG00000018334 Ksr1 AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb kinase suppressor of ras 1 protein-coding common_peak1_36_187_0.225194799533773_7.66718625144452_0.882683879450632 chr2 35462649 35463390 + 0.882683879450632 NA Intergenic Intergenic -1570 NM_001145821 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak1_44_319_-0.19574945732273_8.224053366226_0.882459986229436 chr4 155222972 155223685 + 0.882459986229436 NA promoter-TSS (NM_011385) promoter-TSS (NM_011385) -793 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding unique_peak2_44_319_-0.19574945732273_8.224053366226_0.882459986229436 chr11 98512116 98514477 + 0.882459986229436 NA intron (NM_011771, intron 3 of 7) intron (NM_011771, intron 3 of 7) 32735 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding common_peak1_124_907_0.107572291723789_9.88033463315281_0.88187785673433-2 chr4 26346114 26347209 + 0.88187785673433 NA promoter-TSS (NM_172865) promoter-TSS (NM_172865) -9 NM_172865 242362 Mm.245602 NM_172865 ENSMUSG00000040520 Manea 4932703L02Rik mannosidase, endo-alpha protein-coding common_peak1_124_907_0.107572291723789_9.88033463315281_0.88187785673433 chr1 106758918 106760459 + 0.88187785673433 NA promoter-TSS (NM_001316750) promoter-TSS (NM_001316750) 54 NM_027534 70750 Mm.458911 NM_027534 ENSMUSG00000009905 Kdsr 6330410P18Rik|9430079B08Rik|Fvt1 3-ketodihydrosphingosine reductase protein-coding common_peak1_22_150_-0.299943935231568_7.08843277170929_0.88183373520248 chr12 110447130 110447679 + 0.88183373520248 NA intron (NM_001135001, intron 1 of 13) CpG 225 NM_001135001 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_22_150_-0.299943935231568_7.08843277170929_0.88183373520248-2 chr16 91463473 91463922 + 0.88183373520248 NA Intergenic Lx7|LINE|L1 -1407 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak1_16_65_0.359142141615719_6.22396519016631_0.881817354409502-3 chr17 28016890 28017297 + 0.881817354409502 NA intron (NM_001286040, intron 12 of 24) intron (NM_001286040, intron 12 of 24) 63491 NM_013687 21463 Mm.29758 NM_013687 ENSMUSG00000062859 Tcp11 D17Ken1|Tcp-11 t-complex protein 11 protein-coding common_peak1_16_65_0.359142141615719_6.22396519016631_0.881817354409502-4 chr7 135589765 135590147 + 0.881817354409502 NA intron (NM_001316678, intron 1 of 19) B4A|SINE|B4 -3525 NM_001316680 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding unique_peak2_16_65_0.359142141615719_6.22396519016631_0.881817354409502 chr10 61240126 61240613 + 0.881817354409502 NA intron (NM_001081127, intron 4 of 21) intron (NM_001081127, intron 4 of 21) 33069 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak1_16_65_0.359142141615719_6.22396519016631_0.881817354409502 chr14 31228266 31228735 + 0.881817354409502 NA 3' UTR (NM_001025379, exon 16 of 16) 3' UTR (NM_001025379, exon 16 of 16) 10627 NM_001025379 218877 Mm.27812 NM_001025379 ENSMUSG00000021904 Sema3g AK129018 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G protein-coding common_peak1_16_65_0.359142141615719_6.22396519016631_0.881817354409502-2 chr17 3505589 3506006 + 0.881817354409502 NA intron (NM_001286757, intron 3 of 12) intron (NM_001286757, intron 3 of 12) 22307 NM_001286757 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding unique_peak2_16_65_0.359142141615719_6.22396519016631_0.881817354409502-2 chr2 124732131 124732742 + 0.881817354409502 NA Intergenic Intergenic 78855 NM_199239 214968 Mm.330536 NM_172537 ENSMUSG00000027200 Sema6d 1110067B02Rik|AA409156|D330011G23|mKIAA1479 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D protein-coding unique_peak2_25_172_-0.279206982995793_7.29502473613883_0.881600411696073 chr8 108748448 108749556 + 0.881600411696073 NA intron (NM_007496, intron 1 of 9) intron (NM_007496, intron 1 of 9) 34358 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_25_172_-0.279206982995793_7.29502473613883_0.881600411696073 chr16 11012955 11013513 + 0.881600411696073 NA intron (NR_040518, intron 2 of 2) intron (NR_040518, intron 2 of 2) 4336 NR_040518 100043147 Mm.489001 NR_040518 ENSMUSG00000097056 Gm4262 - predicted gene 4262 ncRNA common_peak1_56_419_-0.16974679811595_8.62937211860815_0.881512630176482 chr11 79659940 79661071 + 0.881512630176482 NA intron (NM_175543, intron 3 of 14) CpG 14581 NR_045898 72218 Mm.443271 NR_045898 ENSMUSG00000086569 Rab11fip4os2 1700020F10Rik|4930542H20Rik|Rab11fib4os2 RAB11 family interacting protein 4 (class II), opposite strand 2 ncRNA common_peak1_56_419_-0.16974679811595_8.62937211860815_0.881512630176482-2 chr2 167359881 167361033 + 0.881512630176482 NA Intergenic B1_Mus1|SINE|Alu -11279 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak1_56_419_-0.16974679811595_8.62937211860815_0.881512630176482-3 chr8 123948690 123949301 + 0.881512630176482 NA intron (NM_172288, intron 1 of 25) CpG 270 NM_172288 234865 Mm.267812 NM_172288 ENSMUSG00000039509 Nup133 mermaid nucleoporin 133 protein-coding common_peak2_69_532_-0.149933697049287_8.98302487423453_0.881489275034711 chr13 90929484 90932164 + 0.881489275034711 NA Intergenic Lx5c|LINE|L1 7702 NM_024175 66475 Mm.306302 NM_024175 ENSMUSG00000049517 Rps23 2410044J15Rik ribosomal protein S23 protein-coding common_peak2_58_437_-0.169260654559348_8.6901567323215_0.881364706229652 chr12 12277536 12279159 + 0.881364706229652 NA intron (NM_029758, intron 2 of 12) intron (NM_029758, intron 2 of 12) 16208 NM_001146119 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding common_peak1_35_247_-0.222898637327852_7.84274699172295_0.881125315861229-2 chr7 25659233 25659922 + 0.881125315861229 NA promoter-TSS (NM_007533) promoter-TSS (NM_007533) 424 NR_104358 27998 Mm.27853 NM_138586 ENSMUSG00000061286 Exosc5 D7Wsu180e exosome component 5 protein-coding unique_peak2_35_247_-0.222898637327852_7.84274699172295_0.881125315861229 chr15 60174249 60176242 + 0.881125315861229 NA Intergenic L1_Mus3|LINE|L1 -158627 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_35_247_-0.222898637327852_7.84274699172295_0.881125315861229 chr14 56265393 56266983 + 0.881125315861229 NA Intergenic Intergenic -3928 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak1_35_247_-0.222898637327852_7.84274699172295_0.881125315861229 chr19 4189394 4190109 + 0.881125315861229 NA intron (NM_178650, intron 3 of 9) B1_Mus1|SINE|Alu 1296 NM_178650 108995 Mm.288312 NM_178650 ENSMUSG00000040247 Tbc1d10c 1810062O14Rik|AI428527 TBC1 domain family, member 10c protein-coding common_peak2_253_2447_-0.0685648373322518_11.2231054240265_0.881036549044736 chr7 25203369 25207721 + 0.881036549044736 NA intron (NM_207677, intron 4 of 4) intron (NM_207677, intron 4 of 4) 12180 NR_106015 102466794 NR_106015 ENSMUSG00000098325 Mir7048 Gm27274|mmu-mir-7048 microRNA 7048 ncRNA common_peak2_230_1974_0.0732191189745226_10.9842464974391_0.880724589487656 chr2 117437706 117444266 + 0.880724589487656 NA Intergenic Intergenic -98109 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak2_54_402_-0.173345010142052_8.56796352345694_0.880715291965954 chr19 8892503 8893825 + 0.880715291965954 NA intron (NM_176843, intron 1 of 1) CpG 177 NM_176843 109077 Mm.290474 NM_176843 ENSMUSG00000071652 Ints5 1110055N21Rik|mKIAA1698 integrator complex subunit 5 protein-coding common_peak2_52_385_-0.176715271824968_8.5040994013556_0.880444316661226 chr5 130023637 130024636 + 0.880444316661226 NA intron (NM_133768, intron 1 of 16) intron (NM_133768, intron 1 of 16) 195 NM_133768 109900 Mm.23869 NM_133768 ENSMUSG00000025533 Asl 2510006M18Rik argininosuccinate lyase protein-coding common_peak2_88_705_-0.130506004506993_9.39827137101769_0.880280092464319 chr5 135712345 135714501 + 0.880280092464319 NA intron (NM_008898, intron 1 of 15) intron (NM_008898, intron 1 of 15) 22466 NR_106001 102466791 NR_106001 ENSMUSG00000099197 Mir7034 Gm27372|mmu-mir-7034 microRNA 7034 ncRNA common_peak1_38_200_0.221891758428932_7.76199757039339_0.880015272171902-2 chr8 111337540 111338436 + 0.880015272171902 NA 5' UTR (NM_029005, exon 1 of 11) 5' UTR (NM_029005, exon 1 of 11) 217 NM_001310613 74568 Mm.207971 NM_029005 ENSMUSG00000012519 Mlkl 9130019I15Rik mixed lineage kinase domain-like protein-coding unique_peak2_38_200_0.221891758428932_7.76199757039339_0.880015272171902 chr14 57768325 57769829 + 0.880015272171902 NA Intergenic Intergenic -22954 NM_015771 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak2_38_200_0.221891758428932_7.76199757039339_0.880015272171902 chr5 53566367 53567342 + 0.880015272171902 NA intron (NM_001080928, intron 1 of 10) intron (NM_001080928, intron 1 of 10) 11075 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak1_38_200_0.221891758428932_7.76199757039339_0.880015272171902 chr2 79270120 79270863 + 0.880015272171902 NA intron (NM_010576, intron 2 of 27) intron (NM_010576, intron 2 of 27) 15065 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_31_154_0.246741169037286_7.39949498979288_0.879994278812366-2 chr13 44535611 44536223 + 0.879994278812366 NA Intergenic Intergenic 96190 NR_045489 69491 Mm.392410 NR_045489 ENSMUSG00000098144 1700029N11Rik - RIKEN cDNA 1700029N11 gene ncRNA common_peak2_31_154_0.246741169037286_7.39949498979288_0.879994278812366 chr14 121198756 121199912 + 0.879994278812366 NA intron (NM_134082, intron 2 of 26) intron (NM_134082, intron 2 of 26) 163760 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding common_peak2_31_154_0.246741169037286_7.39949498979288_0.879994278812366-2 chr3 137820511 137821430 + 0.879994278812366 NA Intergenic Intergenic -43517 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak1_31_154_0.246741169037286_7.39949498979288_0.879994278812366 chr12 32006365 32007076 + 0.879994278812366 NA intron (NM_011158, intron 2 of 10) intron (NM_011158, intron 2 of 10) 54559 NM_011158 19088 Mm.25594 NM_011158 ENSMUSG00000002997 Prkar2b AI451071|AW061005|PKARIIbeta|Pkarb2|RII(beta) protein kinase, cAMP dependent regulatory, type II beta protein-coding common_peak2_131_1122_-0.102597642367011_10.0818433912171_0.879673665022975 chr9 59750117 59751951 + 0.879673665022975 NA promoter-TSS (NM_001172071) promoter-TSS (NM_001172071) -140 NM_173018 270163 Mm.249545 NM_173018 ENSMUSG00000039585 Myo9a 4732465J09Rik|C130068I12Rik|C230003M11 myosin IXa protein-coding common_peak2_601_6540_0.0405800916117158_12.6955855448999_0.87949765632927 chr4 133671118 133681404 + 0.87949765632927 NA Intergenic Intergenic -3614 NM_001145956 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak2_100_691_0.122219965968732_9.49573821062109_0.879264519804101 chr2 26932364 26934304 + 0.879264519804101 NA promoter-TSS (NM_198628) promoter-TSS (NM_198628) 177 NM_011512 20932 Mm.300594 NM_011512 ENSMUSG00000014867 Surf4 AL033340|AL033373|Surf-4 surfeit gene 4 protein-coding common_peak2_5_14_0.653660250110866_4.23372072066395_0.879255460030357 chr13 27205980 27206214 + 0.879255460030357 NA Intergenic (AATAG)n|Simple_repeat|Simple_repeat 7194 NM_001163218 27372 Mm.291456 NM_013766 ENSMUSG00000017922 Prl3c1 Ghd7|PLP-J|Prlpi|Prlpj|decidualin prolactin family 3, subfamily c, member 1 protein-coding common_peak1_50_369_-0.183710683388856_8.43952611882188_0.879104526843124 chr17 34603246 34603749 + 0.879104526843124 NA promoter-TSS (NM_019403) promoter-TSS (NM_019403) 64 NM_019403 54197 Mm.274542 NM_019403 ENSMUSG00000015478 Rnf5 2410131O05Rik|AA407576|NG2 ring finger protein 5 protein-coding common_peak2_239_2287_-0.0713779706216169_11.1241823514676_0.878898457518362 chr17 65782013 65784929 + 0.878898457518362 NA intron (NM_146081, intron 1 of 19) CpG 116 NR_104465 70351 Mm.48686 NM_146081 ENSMUSG00000061950 Ppp4r1 3110001J10Rik|Pp4r1 protein phosphatase 4, regulatory subunit 1 protein-coding common_peak1_10_35_0.463260430065284_5.40155521647495_0.878852710448081 chr17 21471221 21471576 + 0.878852710448081 NA Intergenic RMER17C|LTR|ERVK -17590 NM_013843 24132 Mm.42140 NM_013843 ENSMUSG00000057409 Zfp53 D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8 zinc finger protein 53 protein-coding common_peak1_213_1793_0.0766185556228685_10.8472734527307_0.878646332038639 chr7 45525284 45527362 + 0.878646332038639 NA promoter-TSS (NM_008654) promoter-TSS (NM_008654) -7 NM_148927 69217 Mm.274158 NM_148927 ENSMUSG00000040428 Plekha4 2410005C22Rik|C88169|Pepp1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 protein-coding common_peak2_101_827_-0.119203869185512_9.63388502290657_0.878565003935601 chr11 121259129 121261080 + 0.878565003935601 NA 5' UTR (NM_001080932, exon 1 of 9) 5' UTR (NM_001080932, exon 1 of 9) 117 NM_001080932 68837 Mm.209750 NM_001080932 ENSMUSG00000039275 Foxk2 1110054H05Rik|5730434B08Rik|6230415M23Rik|ILF|Ilf1 forkhead box K2 protein-coding common_peak2_143_1244_-0.0974077315237079_10.2332261611936_0.878271734670447 chr11 74896012 74898768 + 0.878271734670447 NA promoter-TSS (NM_177325) promoter-TSS (NM_177325) -310 NM_197943 97761 Mm.245894 NM_197943 ENSMUSG00000038351 Sgsm2 D630003G22Rik|R74628|Rutbc1|mKIAA0397 small G protein signaling modulator 2 protein-coding common_peak1_109_904_-0.113870652398296_9.76483865577142_0.878239528013802 chr16 32002311 32003616 + 0.878239528013802 NA intron (NM_177103, intron 1 of 9) CpG 324 NM_177103 320213 Mm.152890 NM_023801 ENSMUSG00000022772 Senp5 6230429P13Rik|A730063F07Rik|AI851888|BB189556|SMT3IP3 SUMO/sentrin specific peptidase 5 protein-coding common_peak1_81_640_-0.136124970366959_9.25611806143526_0.878108511528942 chr17 27825276 27826315 + 0.878108511528942 NA Intergenic RMER4B|LTR|ERVK -5253 NM_001271511 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak1_497_5164_0.0457000627555679_12.3574026651302_0.878092882315079 chr4 149696448 149699817 + 0.878092882315079 NA intron (NM_008840, intron 1 of 24) intron (NM_008840, intron 1 of 24) 576 NM_001164050 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak2_375_3920_-0.0540379055315015_11.9099869737508_0.87796898676797 chr6 86848003 86852404 + 0.87796898676797 NA promoter-TSS (NR_028298) promoter-TSS (NR_028298) 686 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding common_peak1_30_209_-0.247563312931816_7.59046386120021_0.877750661913255 chr12 70824989 70825358 + 0.877750661913255 NA promoter-TSS (NM_028127) promoter-TSS (NM_028127) -341 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak1_30_209_-0.247563312931816_7.59046386120021_0.877750661913255-2 chrX 7697168 7697770 + 0.877750661913255 NA intron (NM_173747, intron 1 of 10) intron (NM_173747, intron 1 of 10) 335 NM_173747 209416 Mm.148753 NM_173747 ENSMUSG00000031148 Gpkow 4432411B18|DXErtd697e|DXImx41e|T54 G patch domain and KOW motifs protein-coding common_peak2_203_1688_0.0789417866987829_10.7614245061508_0.877494293994493 chr2 30440667 30443015 + 0.877494293994493 NA intron (NM_138748, intron 8 of 9) intron (NM_138748, intron 8 of 9) 25791 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding common_peak1_344_3266_0.0569501676870505_11.7022258232816_0.877379959500842 chr4 40852231 40854091 + 0.877379959500842 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) 1376 NM_022305 14595 Mm.15622 NM_022305 ENSMUSG00000028413 B4galt1 B-1,4-GalT|B-1,4-GalT1|GalT|Ggtb|Ggtb2|b4Gal-T1|beta-1,4-GalT|beta-1,4-GalT1|beta4Gal-T1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 protein-coding common_peak2_86_686_-0.131368458152247_9.35848205974198_0.876920422675995 chr16 90220160 90221693 + 0.876920422675995 NA exon (NM_011434, exon 1 of 5) exon (NM_011434, exon 1 of 5) 184 NM_011434 20655 Mm.276325 NM_011434 ENSMUSG00000022982 Sod1 B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1 superoxide dismutase 1, soluble protein-coding common_peak1_74_577_-0.144775974211012_9.10253769539517_0.876899020437503 chr13 98291034 98292001 + 0.876899020437503 NA Intergenic Intergenic 25450 NM_145455 218490 Mm.371688 NM_145455 ENSMUSG00000021660 Btf3 1700054E11Rik basic transcription factor 3 protein-coding common_peak2_71_447_0.150555062187776_8.88263245315149_0.876371325527162 chr17 63863169 63864865 + 0.876371325527162 NA promoter-TSS (NM_001037997) promoter-TSS (NM_001037997) 36 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding common_peak2_240_2298_-0.0709392554635304_11.1313211229864_0.87606457875246 chr8 88198404 88201579 + 0.87606457875246 NA exon (NM_001164499, exon 2 of 12) exon (NM_001164499, exon 2 of 12) 778 NM_001164498 214627 Mm.491211 NM_001164497 ENSMUSG00000036779 Papd5 5730445M16Rik|5830428A09 PAP associated domain containing 5 protein-coding unique_peak2_14_94_-0.3878114869196_6.37594986487115_0.875975617067351 chr11 4232836 4233508 + 0.875975617067351 NA Intergenic B4A|SINE|B4 -3613 NM_001013365 18413 Mm.131422 NM_001013365 ENSMUSG00000058755 Osm OncoM oncostatin M protein-coding unique_peak2_14_94_-0.3878114869196_6.37594986487115_0.875975617067351-2 chr3 87860204 87861132 + 0.875975617067351 NA intron (NM_033573, intron 5 of 6) intron (NM_033573, intron 5 of 6) 13913 NM_021309 27371 Mm.86361 NM_021309 ENSMUSG00000028071 Sh2d2a Lad|Ribp|Tsad SH2 domain containing 2A protein-coding common_peak1_14_94_-0.3878114869196_6.37594986487115_0.875975617067351-3 chr8 111991985 111992252 + 0.875975617067351 NA intron (NM_013925, intron 1 of 9) intron (NM_013925, intron 1 of 9) 184 NM_013925 30947 Mm.282162 NM_013925 ENSMUSG00000031949 Adat1 MMADAT1|mADAT1 adenosine deaminase, tRNA-specific 1 protein-coding common_peak1_14_94_-0.3878114869196_6.37594986487115_0.875975617067351 chr1 177442327 177442706 + 0.875975617067351 NA Intergenic CpG -2145 NM_001012330 30928 Mm.330700 NM_013915 ENSMUSG00000063659 Zbtb18 RP58|Zfp238|Znf238 zinc finger and BTB domain containing 18 protein-coding common_peak1_14_94_-0.3878114869196_6.37594986487115_0.875975617067351-2 chr13 32904631 32904949 + 0.875975617067351 NA Intergenic RLTR28|LTR|ERVL -6650 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding unique_peak2_18_121_-0.330373134165996_6.76555077047989_0.875941476724261 chr9 62353977 62354719 + 0.875941476724261 NA intron (NM_009672, intron 1 of 6) intron (NM_009672, intron 1 of 6) 13005 NM_009672 11737 Mm.269088 NM_009672 ENSMUSG00000032249 Anp32a Anp32|I1PP2A|LANP|PHAP1|W91701|pp32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein-coding common_peak1_18_121_-0.330373134165996_6.76555077047989_0.875941476724261 chr17 25256935 25257426 + 0.875941476724261 NA promoter-TSS (NM_001163270) promoter-TSS (NM_001163270) -816 NM_001163270 545192 Mm.328859 NM_001163270 ENSMUSG00000047507 Baiap3 Bap3|Gm937 BAI1-associated protein 3 protein-coding common_peak2_37_263_-0.217417604775208_7.93568531697085_0.875880092688496-3 chr6 59415386 59417172 + 0.875880092688496 NA intron (NM_183183, intron 1 of 1) intron (NM_183183, intron 1 of 1) 10011 NM_183183 243385 Mm.138080 NM_183183 ENSMUSG00000045441 Gprin3 C030038J10Rik|C730021L23 GPRIN family member 3 protein-coding common_peak2_37_263_-0.217417604775208_7.93568531697085_0.875880092688496 chr10 85386706 85388139 + 0.875880092688496 NA exon (NM_028709, exon 1 of 17) exon (NM_028709, exon 1 of 17) 608 NM_028709 74007 Mm.36544 NM_028709 ENSMUSG00000020042 Btbd11 6330404E16Rik BTB (POZ) domain containing 11 protein-coding common_peak2_37_263_-0.217417604775208_7.93568531697085_0.875880092688496-2 chr5 121848417 121849477 + 0.875880092688496 NA promoter-TSS (NM_175474) promoter-TSS (NM_175474) -81 NM_175474 231717 Mm.12654 NM_175474 ENSMUSG00000044134 Fam109a A230106M15Rik|AU017694|IPIP27A|Ses1 family with sequence similarity 109, member A protein-coding common_peak2_250_2192_0.0691073841404055_11.1332437887438_0.87529652064778 chr11 51605287 51607826 + 0.87529652064778 NA exon (NM_001048061, exon 2 of 8) exon (NM_001048061, exon 2 of 8) 325 NM_001048061 15384 Mm.256875 NM_010448 ENSMUSG00000020358 Hnrnpab 3010025C11Rik|CBF-A|Cgbfa|Hnrpab heterogeneous nuclear ribonucleoprotein A/B protein-coding common_peak1_63_479_-0.157412710110638_8.8281842405532_0.874873030252299-2 chrX 101532614 101533577 + 0.874873030252299 NA intron (NM_001290729, intron 1 of 37) intron (NM_001290729, intron 1 of 37) 360 NM_001290729 270627 Mm.261750 NM_001081008 ENSMUSG00000031314 Taf1 AU015687|B430306D02Rik|Ccg-1|Ccg1|KAT4|N-TAF1|TAFII250|Taf2a|p250 TATA-box binding protein associated factor 1 protein-coding common_peak1_63_479_-0.157412710110638_8.8281842405532_0.874873030252299 chr5 105052664 105053564 + 0.874873030252299 NA intron (NM_029509, intron 1 of 9) intron (NM_029509, intron 1 of 9) 447 NM_029509 76074 Mm.458519 NM_029509 ENSMUSG00000034438 Gbp8 5830443L24Rik|mGBP8 guanylate-binding protein 8 protein-coding common_peak2_63_479_-0.157412710110638_8.8281842405532_0.874873030252299 chr2 164544093 164546091 + 0.874873030252299 NA Intergenic (CAAAA)n|Simple_repeat|Simple_repeat -17624 NM_026323 67701 Mm.27289 NM_026323 ENSMUSG00000017723 Wfdc2 1600023A02Rik|HE4|WAP5 WAP four-disulfide core domain 2 protein-coding common_peak1_129_1102_-0.10369024407213_10.0553719535553_0.874870292870101 chr9 45944576 45946358 + 0.874870292870101 NA intron (NM_172257, intron 13 of 25) intron (NM_172257, intron 13 of 25) -5877 NR_106055 102465659 NR_106055 ENSMUSG00000098327 Mir7087 Gm27273|mmu-mir-7087 microRNA 7087 ncRNA common_peak2_98_674_0.122710771875971_9.46009907787618_0.874669086818932 chr4 70534207 70536113 + 0.874669086818932 NA promoter-TSS (NM_172694) promoter-TSS (NM_172694) -232 NM_172694 230316 Mm.251188 NM_172694 ENSMUSG00000039270 Megf9 4933405H16Rik|9630025C07|Egfl5|mKIAA0818 multiple EGF-like-domains 9 protein-coding common_peak2_60_361_0.164673563963767_8.58218266906509_0.874662041352477-2 chr8 84147225 84148536 + 0.874662041352477 NA promoter-TSS (NM_001163752) promoter-TSS (NM_001163752) -127 NM_145970 212139 Mm.41424 NM_145970 ENSMUSG00000036686 Cc2d1a BC016188|Freud-1|Tape coiled-coil and C2 domain containing 1A protein-coding common_peak2_60_361_0.164673563963767_8.58218266906509_0.874662041352477 chr2 120567119 120568265 + 0.874662041352477 NA promoter-TSS (NM_009222) promoter-TSS (NM_009222) 21 NM_009222 20619 Mm.245715 NM_009222 ENSMUSG00000027287 Snap23 23kDa|AA408749|SNAP-23|Sndt|Syndet synaptosomal-associated protein 23 protein-coding common_peak2_79_622_-0.138729503020514_9.21372360151375_0.874452688257119 chr10 88200588 88201763 + 0.874452688257119 NA promoter-TSS (NM_026070) promoter-TSS (NM_026070) 78 NM_027487 67282 Mm.208465 NM_026070 ENSMUSG00000020056 Washc3 2900091E11Rik|5730495F03Rik|Ccdc53 WASH complex subunit 3 protein-coding common_peak2_132_1132_-0.102031833158154_10.0949162292414_0.874382278946594 chr12 25254044 25257723 + 0.874382278946594 NA Intergenic MTE2b|LTR|ERVL-MaLR 126709 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_277_2492_0.0649299244874566_11.3161321297352_0.874007498598682 chr7 127966346 127969198 + 0.874007498598682 NA intron (NM_139149, intron 1 of 14) CpG 293 NM_139149 233908 Mm.277680 NM_139149 ENSMUSG00000030795 Fus D430004D17Rik|D930039C12Rik|Fus1|Tls fused in sarcoma protein-coding common_peak1_72_559_-0.146963990559339_9.0558010216653_0.874005227137499 chr6 91678634 91679546 + 0.874005227137499 NA Intergenic Intergenic -4977 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak1_155_1203_0.0925483952208719_10.2798938743701_0.873991408447523 chr17 46645229 46646956 + 0.873991408447523 NA promoter-TSS (NM_029091) promoter-TSS (NM_029091) -129 NM_001316742 27398 Mm.391007 NM_025302 ENSMUSG00000002767 Mrpl2 CGI-22|L2mt|MRP-L14|MRP-L2|Rpml14 mitochondrial ribosomal protein L2 protein-coding common_peak1_149_1144_0.0956301364917174_10.2089469512302_0.873682148359271 chr16 8636714 8638613 + 0.873682148359271 NA promoter-TSS (NM_016881) promoter-TSS (NM_016881) 38 NM_025708 66690 Mm.10068 NM_025708 ENSMUSG00000043140 Tmem186 2810440M13Rik|4432406C05Rik|AI648175|AW210586 transmembrane protein 186 protein-coding common_peak1_19_81_0.333582223012693_6.52434311612443_0.873590437885177-2 chr12 69458488 69459116 + 0.873590437885177 NA Intergenic Intergenic 16748 NR_038060 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak1_19_81_0.333582223012693_6.52434311612443_0.873590437885177 chr10 94991781 94992250 + 0.873590437885177 NA Intergenic Intergenic -47437 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding common_peak1_19_81_0.333582223012693_6.52434311612443_0.873590437885177-3 chr13 33952215 33952656 + 0.873590437885177 NA intron (NR_040707, intron 1 of 4) intron (NR_040707, intron 1 of 4) -12224 NM_001163239 18105 Mm.264036 NM_020282 ENSMUSG00000046949 Nqo2 NMO2|Nmor2|Ox2 NAD(P)H dehydrogenase, quinone 2 protein-coding common_peak1_19_81_0.333582223012693_6.52434311612443_0.873590437885177-4 chr17 56133974 56134396 + 0.873590437885177 NA promoter-TSS (NM_013662) promoter-TSS (NM_013662) -333 NM_013662 20359 Mm.8029 NM_013662 ENSMUSG00000001227 Sema6b Sema|Seman|VIb|semaZ sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B protein-coding unique_peak2_19_81_0.333582223012693_6.52434311612443_0.873590437885177 chr19 10304351 10305101 + 0.873590437885177 NA intron (NM_198114, intron 1 of 19) CpG 151 NM_198114 269060 Mm.329718 NM_198114 ENSMUSG00000035735 Dagla Nsddr diacylglycerol lipase, alpha protein-coding common_peak1_19_81_0.333582223012693_6.52434311612443_0.873590437885177-5 chr4 6792509 6792903 + 0.873590437885177 NA intron (NM_145711, intron 3 of 8) AmnSINE1|SINE|Deu 198017 NM_145711 252838 Mm.435828 NM_145711 ENSMUSG00000041272 Tox 1700007F02Rik thymocyte selection-associated high mobility group box protein-coding common_peak1_19_81_0.333582223012693_6.52434311612443_0.873590437885177-6 chr7 135648476 135648940 + 0.873590437885177 NA non-coding (NR_015548, exon 3 of 3) non-coding (NR_015548, exon 3 of 3) -3191 NM_001316681 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding unique_peak2_19_81_0.333582223012693_6.52434311612443_0.873590437885177-2 chr2 180704755 180705438 + 0.873590437885177 NA intron (NM_001291432, intron 1 of 5) B4A|SINE|B4 -2994 NM_175551 23856 Mm.253836 NM_011805 ENSMUSG00000038914 Dido1 6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido death inducer-obliterator 1 protein-coding common_peak1_42_228_0.206523382157007_7.94246547917545_0.873539110540415-2 chr14 26515853 26516563 + 0.873539110540415 NA intron (NM_001310445, intron 1 of 22) intron (NM_001310445, intron 1 of 22) 18416 NM_032008 83997 Mm.36769 NM_032008 ENSMUSG00000021870 Slmap D330001L02Rik|Miranda|Slap|mKIAA1601 sarcolemma associated protein protein-coding common_peak1_42_228_0.206523382157007_7.94246547917545_0.873539110540415 chr10 40310051 40311075 + 0.873539110540415 NA Intergenic Intergenic -8375 NM_009665 11702 Mm.253533 NM_009665 ENSMUSG00000075232 Amd1 AdoMetDC|Amd-1|SAMDC|SAMDC 1|adoMetDC1 S-adenosylmethionine decarboxylase 1 protein-coding common_peak1_42_228_0.206523382157007_7.94246547917545_0.873539110540415-3 chr9 66881886 66882523 + 0.873539110540415 NA intron (NM_173413, intron 1 of 7) intron (NM_173413, intron 1 of 7) 37501 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding unique_peak2_33_167_0.237831149381766_7.51123299746964_0.873441239833399 chr2 11180530 11181828 + 0.873441239833399 NA intron (NM_008859, intron 1 of 17) B3|SINE|B2 8797 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_33_167_0.237831149381766_7.51123299746964_0.873441239833399 chr18 20879222 20879938 + 0.873441239833399 NA intron (NM_177038, intron 2 of 28) intron (NM_177038, intron 2 of 28) 16498 NM_177038 75964 Mm.273769 NM_029491 ENSMUSG00000033382 Trappc8 5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012 trafficking protein particle complex 8 protein-coding common_peak2_93_631_0.125962650435273_9.36676207339474_0.873430490747165 chr12 79295553 79297374 + 0.873430490747165 NA promoter-TSS (NM_001008550) promoter-TSS (NM_001008550) -181 NM_001008550 211978 Mm.297919 NM_001008550 ENSMUSG00000066440 Zfyve26 4930465A13|9330197E15Rik|A630028O16Rik|Gm893|mKIAA0321 zinc finger, FYVE domain containing 26 protein-coding common_peak2_88_588_0.130894544933728_9.26757109629732_0.873424879332833-2 chr5 72792390 72794472 + 0.873424879332833 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) -40654 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak2_88_588_0.130894544933728_9.26757109629732_0.873424879332833 chr1 133158660 133159972 + 0.873424879332833 NA Intergenic Intergenic 28150 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding unique_peak2_27_186_-0.260329709869711_7.41672960495278_0.87320520937592 chr14 21031723 21033118 + 0.87320520937592 NA 3' UTR (NM_009502, exon 21 of 21) 3' UTR (NM_009502, exon 21 of 21) 20022 NM_018829 55946 Mm.376269 NM_018829 ENSMUSG00000021824 Ap3m1 1200013D09Rik|C78982|R75378 adaptor-related protein complex 3, mu 1 subunit protein-coding unique_peak2_28_135_0.261200473262229_7.21806307788145_0.87316027347722-2 chr6 113679290 113680372 + 0.87316027347722 NA intron (NM_001113553, intron 8 of 11) intron (NM_001113553, intron 8 of 11) -17668 NM_001033463 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding unique_peak2_28_135_0.261200473262229_7.21806307788145_0.87316027347722 chr11 49061899 49063039 + 0.87316027347722 NA intron (NM_001145164, intron 1 of 1) intron (NM_001145164, intron 1 of 1) 1743 NM_001145164 100039796 Mm.482363 NM_001145164 ENSMUSG00000078921 Tgtp2 OTTMUSG00000005537|TGTP T cell specific GTPase 2 protein-coding common_peak2_169_1514_-0.0868479193214657_10.5216781186996_0.873084220001322 chr2 29964242 29966471 + 0.873084220001322 NA promoter-TSS (NM_001177667) promoter-TSS (NM_001177667) -204 NM_001177668 20740 Mm.204969 NM_001076554 ENSMUSG00000057738 Sptan1 2610027H02Rik|Spna-2|Spna2 spectrin alpha, non-erythrocytic 1 protein-coding common_peak1_171_1361_0.0874408046145909_10.4552313903194_0.873064241697518 chr6 122296546 122298475 + 0.873064241697518 NA Intergenic Intergenic -11500 NM_010749 17113 Mm.249225 NM_010749 ENSMUSG00000007458 M6pr CD-MPR|Mpr46 mannose-6-phosphate receptor, cation dependent protein-coding common_peak2_182_1653_-0.0830895519710193_10.6501987431858_0.872960712311225 chr1 161875225 161877837 + 0.872960712311225 NA 5' UTR (NM_172645, exon 1 of 24) 5' UTR (NM_172645, exon 1 of 24) 130 NM_172645 226551 Mm.170002 NM_172645 ENSMUSG00000040297 Suco 4732491B11|AI848100|AU016931|Opt SUN domain containing ossification factor protein-coding common_peak2_84_668_-0.134220552788969_9.31875212424698_0.872809559460791 chr11 88106501 88108884 + 0.872809559460791 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) 8546 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak1_89_714_-0.129008482914765_9.41729519020837_0.872653454804652 chr15 103257562 103259504 + 0.872653454804652 NA promoter-TSS (NM_001302341) promoter-TSS (NM_001302341) -130 NM_001302341 18022 Mm.457989 NM_008685 ENSMUSG00000058794 Nfe2 NF-E2|NF-E2/P45|p45|p45NFE2|p45nf-e2 nuclear factor, erythroid derived 2 protein-coding common_peak2_192_1762_-0.0810114668739228_10.7433110258832_0.872626563559119 chr7 81788199 81790213 + 0.872626563559119 NA intron (NM_026077, intron 1 of 4) intron (NM_026077, intron 1 of 4) 247 NM_026077 67290 Mm.248391 NM_026077 ENSMUSG00000025102 3110040N11Rik AI851475 RIKEN cDNA 3110040N11 gene protein-coding common_peak2_58_346_0.166734552463565_8.52215912881004_0.872562374590353 chr4 132509606 132510649 + 0.872562374590353 NA exon (NM_144907, exon 1 of 10) exon (NM_144907, exon 1 of 10) 329 NM_144907 230784 Mm.23608 NM_144907 ENSMUSG00000028893 Sesn2 HI95|SEST2|Ses2 sestrin 2 protein-coding common_peak2_76_488_0.143030885820833_9.00520609786265_0.872447110246525-2 chr4 34686557 34687942 + 0.872447110246525 NA exon (NM_011895, exon 1 of 8) exon (NM_011895, exon 1 of 8) 189 NM_011895 24060 Mm.281885 NM_011895 ENSMUSG00000028293 Slc35a1 AA408150|AI314851 solute carrier family 35 (CMP-sialic acid transporter), member 1 protein-coding common_peak2_76_488_0.143030885820833_9.00520609786265_0.872447110246525 chr14 75444699 75446674 + 0.872447110246525 NA Intergenic Intergenic -10296 NM_001128093 380918 Mm.484360 NM_001128093 ENSMUSG00000091722 Siah3 Gm912 seven in absentia homolog 3 (Drosophila) protein-coding common_peak1_44_242_0.20136613395885_8.02549557058521_0.872095178144025 chr17 6816535 6817362 + 0.872095178144025 NA Intergenic Intergenic -34168 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak1_39_279_-0.211536478127835_8.02351477788105_0.872095178144025 chr8 35633548 35634284 + 0.872095178144025 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -44896 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak2_44_242_0.20136613395885_8.02549557058521_0.872095178144025 chr4 88784742 88785695 + 0.872095178144025 NA 5' UTR (NM_001085532, exon 1 of 1) 5' UTR (NM_001085532, exon 1 of 1) 164 NM_001085532 545649 Mm.474424 NM_001085532 ENSMUSG00000099545 Gm13276 OTTMUSG00000011269 predicted gene 13276 protein-coding common_peak2_32_224_-0.236461243556158_7.69555056943896_0.871447311866323 chr7 16205053 16206377 + 0.871447311866323 NA intron (NM_027883, intron 8 of 16) intron (NM_027883, intron 8 of 16) 16278 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak1_32_224_-0.236461243556158_7.69555056943896_0.871447311866323-2 chr18 39034659 39035344 + 0.871447311866323 NA intron (NM_175164, intron 1 of 22) intron (NM_175164, intron 1 of 22) 41856 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_32_224_-0.236461243556158_7.69555056943896_0.871447311866323 chr12 105004879 105005468 + 0.871447311866323 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 4636 NM_172500 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak1_54_315_0.177510270208813_8.39253588328151_0.871413185465908 chr4 130910255 130911428 + 0.871413185465908 NA Intergenic Intergenic -2493 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding common_peak2_336_3435_-0.0573315059948332_11.717848568141_0.871219558899736 chr11 49201943 49205350 + 0.871219558899736 NA intron (NM_009562, intron 1 of 3) CpG 146 NM_009562 22720 Mm.16650 NM_009562 ENSMUSG00000046311 Zfp62 - zinc finger protein 62 protein-coding common_peak1_21_142_-0.300073594084438_7.00983453973617_0.870956391174341 chr17 34959357 34959706 + 0.870956391174341 NA promoter-TSS (NM_010478) promoter-TSS (NM_010478) -293 NM_010478 15511 Mm.372314 NM_010478 ENSMUSG00000090877 Hspa1b Hsp70|Hsp70-1|Hsp70.1|hsp68 heat shock protein 1B protein-coding unique_peak2_21_142_-0.300073594084438_7.00983453973617_0.870956391174341-4 chr9 42261017 42262084 + 0.870956391174341 NA intron (NM_172769, intron 2 of 5) intron (NM_172769, intron 2 of 5) 2750 NM_172769 235293 Mm.32700 NM_172769 ENSMUSG00000032018 Sc5d A830037K02|A830073K23Rik|Sc5dl sterol-C5-desaturase protein-coding unique_peak2_21_142_-0.300073594084438_7.00983453973617_0.870956391174341 chr11 115142603 115143392 + 0.870956391174341 NA intron (NM_001163753, intron 1 of 8) RSINE1|SINE|B4 -9005 NM_145634 246746 Mm.277387 NM_145634 ENSMUSG00000047798 Cd300lf CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3 CD300 molecule like family member F protein-coding unique_peak2_21_142_-0.300073594084438_7.00983453973617_0.870956391174341-2 chr15 35528753 35530207 + 0.870956391174341 NA intron (NM_177151, intron 17 of 61) intron (NM_177151, intron 17 of 61) 131438 NR_035527 100316736 NR_035527 ENSMUSG00000076333 Mir599 mmu-mir-599 microRNA 599 ncRNA unique_peak2_21_142_-0.300073594084438_7.00983453973617_0.870956391174341-3 chr8 14995832 14996883 + 0.870956391174341 NA intron (NM_172751, intron 27 of 28) intron (NM_172751, intron 27 of 28) -14668 NM_029116 74901 Mm.46675 NM_029116 ENSMUSG00000055675 Kbtbd11 2900016B01Rik|4930465M17Rik|mKIAA0711 kelch repeat and BTB (POZ) domain containing 11 protein-coding common_peak2_127_1081_-0.10339458714258_10.0277874902555_0.87064079156949 chr17 24849362 24851184 + 0.87064079156949 NA promoter-TSS (NM_023480) promoter-TSS (NM_023480) 29 NM_023480 68636 Mm.347964 NM_023480 ENSMUSG00000045316 Fahd1 1110025H10Rik|AV002085 fumarylacetoacetate hydrolase domain containing 1 protein-coding common_peak2_57_427_-0.166191360702221_8.65837130605004_0.870005354391354 chr10 93588822 93589845 + 0.870005354391354 NA promoter-TSS (NR_045810) promoter-TSS (NR_045810) -80 NR_045810 74454 Mm.410794 NR_045810 ENSMUSG00000097407 4933408J17Rik - RIKEN cDNA 4933408J17 gene ncRNA common_peak1_67_416_0.15285730990222_8.78033222839577_0.869843206008751 chr11 46388159 46389051 + 0.869843206008751 NA intron (NM_001281965, intron 1 of 16) intron (NM_001281965, intron 1 of 16) 910 NM_001281968 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding common_peak1_82_649_-0.134790038747468_9.27690088854208_0.869732378149014 chr7 80900791 80902048 + 0.869732378149014 NA promoter-TSS (NM_028026) promoter-TSS (NM_028026) -150 NR_027976 71968 Mm.274226 NM_028026 ENSMUSG00000025722 Wdr73 1200011I23Rik|2410008B13Rik|AI848574|C85352 WD repeat domain 73 protein-coding common_peak1_86_571_0.132926493887464_9.22633458372212_0.869662682507272 chr2 26932508 26933691 + 0.869662682507272 NA promoter-TSS (NM_198628) promoter-TSS (NM_198628) 412 NM_011512 20932 Mm.300594 NM_011512 ENSMUSG00000014867 Surf4 AL033340|AL033373|Surf-4 surfeit gene 4 protein-coding common_peak1_86_571_0.132926493887464_9.22633458372212_0.869662682507272-2 chr2 127586907 127587757 + 0.869662682507272 NA promoter-TSS (NM_029963) promoter-TSS (NM_029963) -94 NM_029963 77721 Mm.274601 NM_029963 ENSMUSG00000027374 Mrps5 1620401I16Rik|AI850294 mitochondrial ribosomal protein S5 protein-coding common_peak2_41_295_-0.205366410644094_8.1067701603069_0.869524105364838 chr6 39333387 39334421 + 0.869524105364838 NA TTS (NM_028123) TTS (NM_028123) 43803 NM_028123 72144 Mm.482167 NM_028123 ENSMUSG00000029924 Slc37a3 2610507O21Rik|AU044904 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 protein-coding unique_peak2_24_164_-0.280307022109432_7.2261687031911_0.869334897131701 chr14 106034859 106036047 + 0.869334897131701 NA Intergenic Intergenic -70745 NM_198601 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_24_164_-0.280307022109432_7.2261687031911_0.869334897131701 chr14 30950950 30951530 + 0.869334897131701 NA promoter-TSS (NM_011849) promoter-TSS (NM_011849) -137 NM_001308328 23955 Mm.251494 NM_011849 ENSMUSG00000021918 Nek4 Stk2 NIMA (never in mitosis gene a)-related expressed kinase 4 protein-coding common_peak1_24_164_-0.280307022109432_7.2261687031911_0.869334897131701-2 chrX 167024540 167025005 + 0.869334897131701 NA Intergenic MTEa|LTR|ERVL-MaLR 45598 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak2_24_164_-0.280307022109432_7.2261687031911_0.869334897131701 chr16 91423317 91424369 + 0.869334897131701 NA intron (NM_008349, intron 6 of 6) MER33|DNA|hAT-Charlie 17608 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding unique_peak2_24_164_-0.280307022109432_7.2261687031911_0.869334897131701-2 chr15 100709880 100710995 + 0.869334897131701 NA intron (NM_172451, intron 4 of 11) MTD|LTR|ERVL-MaLR 10040 NM_001161768 207839 Mm.22969 NM_172451 ENSMUSG00000037280 Galnt6 4632410F13|AW047994|GalNAc-T6 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 protein-coding common_peak2_91_614_0.127242826239621_9.32806401334641_0.869250187961776 chr11 117598517 117600075 + 0.869250187961776 NA Intergenic Intergenic -11951 NR_015489 78403 Mm.212543 NR_015489 2900041M22Rik - RIKEN cDNA 2900041M22 gene ncRNA common_peak1_50_286_0.182763850451769_8.25628885190157_0.869140085991445 chrX 74392481 74393243 + 0.869140085991445 NA promoter-TSS (NM_001161423) promoter-TSS (NM_001161423) 412 NM_025473 66294 Mm.166485 NM_025473 ENSMUSG00000031399 Fam3a 1810037C20Rik family with sequence similarity 3, member A protein-coding common_peak2_139_1202_-0.0977505902798299_10.1835456320362_0.869117498631465 chr8 70776064 70778276 + 0.869117498631465 NA promoter-TSS (NM_008841) promoter-TSS (NM_008841) 308 NR_029440 72093 Mm.271208 NR_029440 2010320M18Rik - RIKEN cDNA 2010320M18 gene ncRNA common_peak1_202_1678_0.0788129088410088_10.7527929693575_0.868981732288562 chr5 8673342 8675681 + 0.868981732288562 NA intron (NM_011076, intron 3 of 27) intron (NM_011076, intron 3 of 27) 14419 NM_011076 18671 Mm.207354 NM_011076 ENSMUSG00000040584 Abcb1a Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3 ATP-binding cassette, sub-family B (MDR/TAP), member 1A protein-coding common_peak1_68_523_-0.150827681290655_8.95800916089212_0.868916972202251 chr10 111972742 111973480 + 0.868916972202251 NA intron (NM_178610, intron 1 of 9) CpG 416 NM_178610 52705 Mm.34606 NM_178610 ENSMUSG00000063334 Krr1 2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding common_peak2_35_180_0.231451785975818_7.61557178007111_0.868903459415882 chr1 127227358 127228850 + 0.868903459415882 NA intron (NM_145128, intron 1 of 17) intron (NM_145128, intron 1 of 17) 23118 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding unique_peak2_35_180_0.231451785975818_7.61557178007111_0.868903459415882 chr12 100772647 100774015 + 0.868903459415882 NA Intergenic B4A|SINE|B4 -5792 NM_145448 217830 Mm.218590 NM_145448 ENSMUSG00000021185 9030617O03Rik - RIKEN cDNA 9030617O03 gene protein-coding common_peak1_145_1264_-0.095990332009686_10.2569265035768_0.868836292201579 chr10 119239023 119240415 + 0.868836292201579 NA 5' UTR (NM_027994, exon 1 of 15) 5' UTR (NM_027994, exon 1 of 15) 336 NM_027994 71902 Mm.203965 NM_027994 ENSMUSG00000020114 Cand1 2310038O07Rik|6330512O03Rik|AI195005|AI846556|D10Ertd516e|Tp120a|mKIAA0829 cullin associated and neddylation disassociated 1 protein-coding common_peak1_228_2161_-0.072682912976477_11.0418093512464_0.868802290256495 chr3 96239045 96240818 + 0.868802290256495 NA promoter-TSS (NM_178216).2 promoter-TSS (NM_178216).2 403 NM_013549 15267 Mm.5220 NM_013549 ENSMUSG00000064220 Hist2h2aa1 AI448581|H2a-614|H2a-615|Hist2 histone cluster 2, H2aa1 protein-coding common_peak1_55_410_-0.169817522477402_8.59808582244298_0.868733974563716 chr2 29691268 29692506 + 0.868733974563716 NA intron (NM_054050, intron 5 of 23) MIRc|SINE|MIR -69641 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak1_115_826_0.110144417714006_9.74681572802828_0.868232391111762 chr8 22592920 22593907 + 0.868232391111762 NA intron (NM_011696, intron 1 of 8) CpG 400 NM_001198998 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak1_43_311_-0.198992164981941_8.18590613637128_0.867972927908412-2 chr5 62791476 62792024 + 0.867972927908412 NA Intergenic Intergenic -22073 NM_001170705 100322896 Mm.479821 NM_001170705 ENSMUSG00000090326 Dthd1 Gm17384 death domain containing 1 protein-coding common_peak1_43_311_-0.198992164981941_8.18590613637128_0.867972927908412 chr14 50869777 50870575 + 0.867972927908412 NA intron (NM_009351, intron 1 of 54) intron (NM_009351, intron 1 of 54) 378 NM_009351 21745 Mm.318736 NM_009351 ENSMUSG00000006281 Tep1 Tp1 telomerase associated protein 1 protein-coding common_peak2_53_393_-0.173231941430425_8.53543584874116_0.86793536759631 chr11 90239284 90241814 + 0.86793536759631 NA Intergenic MER53|DNA|hAT -8927 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak2_65_400_0.156473832392317_8.72569534265108_0.867647144107545 chr9 72958055 72959703 + 0.867647144107545 NA promoter-TSS (NM_001163725) promoter-TSS (NM_001163725) 94 NM_001163725 67685 Mm.31817 NM_026314 ENSMUSG00000089865 Dyx1c1 1700010I24Rik|Dnaaf4|EKN1|b2b811.1Clo|b2b811Clo dyslexia susceptibility 1 candidate 1 protein-coding common_peak1_45_327_-0.192478889338219_8.26131255994897_0.867286935240895 chr16 45742378 45742962 + 0.867286935240895 NA intron (NM_172511, intron 1 of 4) intron (NM_172511, intron 1 of 4) 285 NM_001272070 213012 Mm.247453 NM_172511 ENSMUSG00000033157 Abhd10 - abhydrolase domain containing 10 protein-coding common_peak2_45_327_-0.192478889338219_8.26131255994897_0.867286935240895 chr7 98164499 98165818 + 0.867286935240895 NA intron (NM_007602, intron 1 of 12) intron (NM_007602, intron 1 of 12) -2816 NM_001301250 12337 Mm.326847 NM_007602 ENSMUSG00000035547 Capn5 nCL-3 calpain 5 protein-coding unique_peak2_45_327_-0.192478889338219_8.26131255994897_0.867286935240895 chr4 145282882 145284743 + 0.867286935240895 NA intron (NM_009401, intron 10 of 12) intron (NM_009401, intron 10 of 12) 31335 NM_009401 21941 Mm.12810 NM_009401 ENSMUSG00000028602 Tnfrsf8 Cd30|D1S166E|Ki|Ki-1 tumor necrosis factor receptor superfamily, member 8 protein-coding common_peak1_118_853_0.108980110619154_9.79258231493007_0.867171411376371 chr7 29953445 29954602 + 0.867171411376371 NA Intergenic CpG -2130 NM_178384 72723 Mm.371648 NM_178384 ENSMUSG00000059975 Zfp74 2810054M15Rik|KRAB8|Zfp66|Znf569|mszf21|mszf77 zinc finger protein 74 protein-coding unique_peak2_34_239_-0.225444881084985_7.79416815506603_0.866949182615091-2 chr5 62853945 62855587 + 0.866949182615091 NA intron (NM_001170705, intron 7 of 8) intron (NM_001170705, intron 7 of 8) 40943 NM_001170705 100322896 Mm.479821 NM_001170705 ENSMUSG00000090326 Dthd1 Gm17384 death domain containing 1 protein-coding unique_peak2_34_239_-0.225444881084985_7.79416815506603_0.866949182615091 chr19 4927621 4929008 + 0.866949182615091 NA promoter-TSS (NM_133803) promoter-TSS (NM_133803) -27 NM_133803 75221 Mm.234769 NM_133803 ENSMUSG00000063904 Dpp3 4930533O14Rik|C86324 dipeptidylpeptidase 3 protein-coding common_peak1_166_1312_0.0880954047950731_10.4026989032904_0.866922439091862 chr1 43462588 43465049 + 0.866922439091862 NA intron (NM_010879, intron 1 of 4) intron (NM_010879, intron 1 of 4) 18067 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_15_60_0.365515925562281_6.11349530034403_0.866757392601631-2 chr11 20248068 20248511 + 0.866757392601631 NA intron (NM_172260, intron 1 of 6) intron (NM_172260, intron 1 of 6) 1135 NM_172260 216543 Mm.260314 NM_172260 ENSMUSG00000044066 Cep68 6030463E10Rik|AI481761|BC027174|Kiaa0582 centrosomal protein 68 protein-coding common_peak1_15_60_0.365515925562281_6.11349530034403_0.866757392601631 chr10 22298132 22298532 + 0.866757392601631 NA intron (NM_009018, intron 5 of 5) intron (NM_009018, intron 5 of 5) -8388 NR_015465 606736 Mm.387042 NR_015465 ENSMUSG00000097352 C920009B18Rik - RIKEN cDNA C920009B18 gene ncRNA unique_peak2_15_60_0.365515925562281_6.11349530034403_0.866757392601631 chr2 161109290 161109769 + 0.866757392601631 NA promoter-TSS (NR_126509) promoter-TSS (NR_126509) -443 NR_126509 71389 Mm.122738 NM_173368 ENSMUSG00000057133 Chd6 5430439G14Rik|6330406J24Rik|CHD-6 chromodomain helicase DNA binding protein 6 protein-coding unique_peak2_13_87_-0.399479179805727_6.25969202873443_0.866645077876892-3 chr5 129583785 129584391 + 0.866645077876892 NA promoter-TSS (NM_011846) promoter-TSS (NM_011846) -126 NM_011846 23948 Mm.42047 NM_011846 ENSMUSG00000029436 Mmp17 MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding common_peak1_13_87_-0.399479179805727_6.25969202873443_0.866645077876892 chr1 80737486 80737863 + 0.866645077876892 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 20879 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding unique_peak2_13_87_-0.399479179805727_6.25969202873443_0.866645077876892-2 chr3 9974377 9975066 + 0.866645077876892 NA Intergenic Intergenic -37864 NM_001272097 16592 Mm.741 NM_010634 ENSMUSG00000027533 Fabp5 E-FABP|Fabpe|Klbp|PA-FABP|mal1 fatty acid binding protein 5, epidermal protein-coding common_peak1_13_87_-0.399479179805727_6.25969202873443_0.866645077876892-2 chr2 166634755 166635157 + 0.866645077876892 NA intron (NM_177782, intron 4 of 39) B1_Mur2|SINE|Alu -37762 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA unique_peak2_13_87_-0.399479179805727_6.25969202873443_0.866645077876892 chr11 57669755 57670512 + 0.866645077876892 NA intron (NM_134189, intron 1 of 11) intron (NM_134189, intron 1 of 11) 24691 NM_134189 171212 Mm.271670 NM_134189 ENSMUSG00000020520 Galnt10 AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 protein-coding common_peak2_187_1707_-0.081736549821759_10.6972239847096_0.866628319444348 chr2 121955280 121957645 + 0.866628319444348 NA promoter-TSS (NM_008545) promoter-TSS (NM_008545) -370 NM_008545 17147 Mm.389349 NM_008545 ENSMUSG00000074881 Mageb3 Mage-b3|Mage-ps1|Mage-rs3|Smage3 melanoma antigen, family B, 3 protein-coding common_peak2_280_2526_0.0643815382562849_11.3354007180729_0.866467045960007 chr6 113667795 113675314 + 0.866467045960007 NA intron (NM_001113553, intron 3 of 11) PB1D10|SINE|Alu -25945 NM_001033463 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak1_49_360_-0.18322752356443_8.40424126510496_0.866359045247561 chr1 143918884 143919642 + 0.866359045247561 NA Intergenic Intergenic 84886 NM_009061 19735 Mm.28262 NM_009061 ENSMUSG00000026360 Rgs2 GOS8 regulator of G-protein signaling 2 protein-coding common_peak2_49_360_-0.18322752356443_8.40424126510496_0.866359045247561 chr2 160872115 160873488 + 0.866359045247561 NA 5' UTR (NM_177263, exon 1 of 4) 5' UTR (NM_177263, exon 1 of 4) 189 NM_177263 320799 Mm.436734 NM_177263 ENSMUSG00000035877 Zhx3 1810059C13Rik|4932418O04Rik|9530010N21Rik|Tix1|mKIAA0395 zinc fingers and homeoboxes 3 protein-coding common_peak2_49_360_-0.18322752356443_8.40424126510496_0.866359045247561-2 chr7 118704990 118706381 + 0.866359045247561 NA promoter-TSS (NM_019580) promoter-TSS (NM_019580) 53 NM_019580 56209 Mm.273142 NM_019580 ENSMUSG00000033917 Gde1 1200003M13Rik|Mir16|RGS16 glycerophosphodiester phosphodiesterase 1 protein-coding common_peak1_51_377_-0.180208868393784_8.47213799002418_0.866079736537205 chr9 50774818 50775845 + 0.866079736537205 NA non-coding (NR_045601, exon 1 of 14) non-coding (NR_045601, exon 1 of 14) 106 NR_045601 102580 Mm.160035 NM_133981 ENSMUSG00000032059 Alg9 8230402H15Rik|AI747665|B430313H07Rik|Dibd1 asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase) protein-coding common_peak2_95_770_-0.123586959450227_9.52879357018992_0.865954875279281 chr4 107879016 107880626 + 0.865954875279281 NA promoter-TSS (NM_001282737) promoter-TSS (NM_001282737) 66 NM_001282737 17149 Mm.808 NM_001282737 ENSMUSG00000028609 Magoh Mago-m|Mos2 mago homolog, exon junction complex core component protein-coding common_peak1_63_384_0.160763249915616_8.66909626054007_0.865806942688966 chr6 47877451 47878451 + 0.865806942688966 NA intron (NM_146175, intron 1 of 7) CpG 396 NM_146175 101095 Mm.440186 NM_146175 ENSMUSG00000025821 Zfp282 AI449432|C81429|E430019K09Rik|HUB1 zinc finger protein 282 protein-coding common_peak2_63_384_0.160763249915616_8.66909626054007_0.865806942688966 chr11 119602315 119603730 + 0.865806942688966 NA 5' UTR (NM_001306081, exon 1 of 33) 5' UTR (NM_001306081, exon 1 of 33) 117 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak1_72_456_0.146268671327558_8.90918469072185_0.865596299958722 chr15 96719527 96720909 + 0.865596299958722 NA Intergenic Intergenic -20520 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_22_99_0.294604614318786_6.79115849693412_0.865541677229453-4 chr15 37791816 37792215 + 0.865541677229453 NA promoter-TSS (NM_001170866) promoter-TSS (NM_001170866) -15 NM_001170866 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding unique_peak2_22_99_0.294604614318786_6.79115849693412_0.865541677229453 chr12 70148260 70149055 + 0.865541677229453 NA Intergenic Intergenic -5514 NM_001195033 100504285 Mm.291105 NM_001195033 ENSMUSG00000090121 Abhd12b Gm804 abhydrolase domain containing 12B protein-coding common_peak1_22_99_0.294604614318786_6.79115849693412_0.865541677229453-2 chr11 46391239 46391754 + 0.865541677229453 NA intron (NR_105955, intron 2 of 4) intron (NR_105955, intron 2 of 4) -1981 NM_001281965 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding common_peak1_22_99_0.294604614318786_6.79115849693412_0.865541677229453-5 chr8 36249507 36249960 + 0.865541677229453 NA promoter-TSS (NM_001081150) promoter-TSS (NM_001081150) -217 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding common_peak1_22_99_0.294604614318786_6.79115849693412_0.865541677229453-3 chr11 68458404 68458932 + 0.865541677229453 NA intron (NM_177320, intron 1 of 18) RSINE1|SINE|B4 26543 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak1_22_99_0.294604614318786_6.79115849693412_0.865541677229453-6 chr9 62122876 62123310 + 0.865541677229453 NA promoter-TSS (NR_039595) promoter-TSS (NR_039595) -499 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA common_peak1_22_99_0.294604614318786_6.79115849693412_0.865541677229453 chr1 21345219 21345719 + 0.865541677229453 NA Intergenic RLTR41|LTR|ERV1 -4208 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak2_265_2358_0.0665529206092543_11.2372361635441_0.865267641220728 chr7 66154703 66164619 + 0.865267641220728 NA intron (NM_001081163, intron 2 of 2) L1_Mur3|LINE|L1 50146 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_128_1091_-0.10289545451262_10.0413094136635_0.865234282255354 chr2 144165018 144166875 + 0.865234282255354 NA Intergenic Intergenic 23344 NM_001033778 common_peak1_269_2403_0.0657042841930853_11.2640733228077_0.864761860657929 chr1 183296380 183298378 + 0.864761860657929 NA promoter-TSS (NM_027861) promoter-TSS (NM_027861) 319 NM_181732 108909 Mm.290502 NM_145626 ENSMUSG00000042901 Aida 2610208M17Rik|BC004835 axin interactor, dorsalization associated protein-coding common_peak2_127_936_0.10418495902505_9.92399771717171_0.864531271761332 chr6 72551789 72553843 + 0.864531271761332 NA intron (NM_001271395, intron 1 of 9) intron (NM_001271395, intron 1 of 9) 3169 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding unique_peak2_0_4_-0.932124076507617_1.85586605663355_0.864171920961574 chr2 126147809 126148017 + 0.864171920961574 NA intron (NM_029455, intron 1 of 16) PB1D10|SINE|Alu 4091 NM_029455 75823 Mm.444732 NM_029455 ENSMUSG00000027209 Fam227b 4930525F21Rik family with sequence similarity 227, member B protein-coding common_peak1_137_1182_-0.0990267269066383_10.1587209948865_0.864086113373694 chr19 37550124 37551401 + 0.864086113373694 NA intron (NM_175353, intron 1 of 21) CpG 344 NM_175353 107371 Mm.24865 NM_175353 ENSMUSG00000053799 Exoc6 4833405E05Rik|AW413330|C430002C19|Sec15|Sec15l1|hbd|msec15 exocyst complex component 6 protein-coding common_peak2_64_488_-0.156776134619337_8.85530258764257_0.863719947840125 chr7 83891456 83892942 + 0.863719947840125 NA 5' UTR (NM_023403, exon 1 of 3) 5' UTR (NM_023403, exon 1 of 3) 199 NM_023403 67943 Mm.117365 NM_023403 ENSMUSG00000038503 Mesdc2 2210015O11Rik|AW537813|mKIAA0081|mesd|msd mesoderm development candidate 2 protein-coding common_peak1_30_148_0.247513684272145_7.34292536259823_0.863688292817179 chr8 119862253 119862786 + 0.863688292817179 NA intron (NM_146219, intron 1 of 4) intron (NM_146219, intron 1 of 4) 214 NM_146219 234796 Mm.86446 NM_146219 ENSMUSG00000031828 Klhl36 - kelch-like 36 protein-coding unique_peak2_30_148_0.247513684272145_7.34292536259823_0.863688292817179 chr17 31834882 31836376 + 0.863688292817179 NA Intergenic Intergenic 20163 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak1_219_2059_-0.0739129813119526_10.9714721314146_0.863640267403253 chr7 13037156 13039124 + 0.863640267403253 NA promoter-TSS (NM_145578) promoter-TSS (NM_145578) 135 NM_001168469 22192 Mm.196580 NM_145578 ENSMUSG00000005575 Ube2m 2510040H03Rik|UBC12|Ubc-rs2 ubiquitin-conjugating enzyme E2M protein-coding common_peak1_37_194_0.219646200833636_7.71715341416643_0.863301012686554 chr17 35469730 35470607 + 0.863301012686554 NA promoter-TSS (NM_010391) promoter-TSS (NM_010391) 79 NM_010391 15007 Mm.88795 NM_010391 ENSMUSG00000067235 H2-Q10 H-2Q10|Q10|Qa10 histocompatibility 2, Q region locus 10 protein-coding common_peak2_37_194_0.219646200833636_7.71715341416643_0.863301012686554 chr16 17726661 17727459 + 0.863301012686554 NA Intergenic Intergenic -4113 NM_001040683 94112 Mm.208970 NM_033609 ENSMUSG00000012114 Med15 A230074L19Rik|AW536074|Pcqap|mPcqap mediator complex subunit 15 protein-coding common_peak2_145_1107_0.0951891715227973_10.1613367518106_0.863102667772327 chr7 27540667 27543465 + 0.863102667772327 NA intron (NM_011116, intron 4 of 13) intron (NM_011116, intron 4 of 13) 11046 NM_011116 18807 Mm.6483 NM_011116 ENSMUSG00000003363 Pld3 Sam-9 phospholipase D family, member 3 protein-coding common_peak1_136_1021_0.0991580755972379_10.0467585187362_0.863100312831849 chr16 44331846 44333528 + 0.863100312831849 NA 5' UTR (NM_001159419, exon 1 of 25) 5' UTR (NM_001159419, exon 1 of 25) 151 NM_198034 320007 Mm.242144 NM_198034 ENSMUSG00000022696 Sidt1 AW045928|B830021E24Rik SID1 transmembrane family, member 1 protein-coding common_peak2_97_666_0.121945596912456_9.44251574964081_0.86279171344975 chr2 150566427 150568753 + 0.86279171344975 NA Intergenic Intergenic -2825 NM_009977 13011 Mm.12965 NM_009977 ENSMUSG00000068129 Cst7 Cmap cystatin F (leukocystatin) protein-coding unique_peak2_17_114_-0.340804689071708_6.67508770640852_0.862557343927818-2 chr19 55768093 55769061 + 0.862557343927818 NA intron (NM_001142920, intron 4 of 11) intron (NM_001142920, intron 4 of 11) 26767 NM_001142923 21416 Mm.139815 NM_009333 ENSMUSG00000024985 Tcf7l2 TCF4B|TCF4E|Tcf-4|Tcf4 transcription factor 7 like 2, T cell specific, HMG box protein-coding unique_peak2_17_114_-0.340804689071708_6.67508770640852_0.862557343927818-3 chr8 122952747 122953906 + 0.862557343927818 NA intron (NR_037865, intron 2 of 13) intron (NR_037865, intron 2 of 13) 88958 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak2_17_114_-0.340804689071708_6.67508770640852_0.862557343927818 chr19 4438150 4438844 + 0.862557343927818 NA promoter-TSS (NR_045990) promoter-TSS (NR_045990) -826 NR_045990 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak2_120_1011_-0.106426730058862_9.92978020966488_0.862219633605977 chrX 98936617 98938921 + 0.862219633605977 NA promoter-TSS (NM_207633) promoter-TSS (NM_207633) -12 NM_207633 77929 Mm.212290 NM_207633 ENSMUSG00000047694 Yipf6 A430107J06Rik Yip1 domain family, member 6 protein-coding common_peak1_211_1773_0.0761760935147606_10.8308783410584_0.861935808927865 chr5 33819672 33821862 + 0.861935808927865 NA Intergenic CpG -22345 NM_175231 107823 Mm.19892 NM_175231 ENSMUSG00000057406 Whsc1 5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|NSD2|Whsc1l|mKIAA1090 Wolf-Hirschhorn syndrome candidate 1 (human) protein-coding common_peak1_82_538_0.135364406415842_9.14182366596043_0.861598648184647 chr12 55199241 55200174 + 0.861598648184647 NA exon (NM_028527, exon 1 of 5).2 exon (NM_028527, exon 1 of 5).2 115 NM_028527 73385 Mm.439875 NM_028527 ENSMUSG00000095595 Fam177a 1700047I17Rik|1700047I17Rik1|C14orf24|D730001C10Rik|Fam177a1 family with sequence similarity 177, member A protein-coding common_peak2_82_538_0.135364406415842_9.14182366596043_0.861598648184647 chr1 92827825 92830147 + 0.861598648184647 NA Intergenic Intergenic -2700 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_82_538_0.135364406415842_9.14182366596043_0.861598648184647-2 chr17 78936358 78937718 + 0.861598648184647 NA promoter-TSS (NM_001024806) promoter-TSS (NM_001024806) 32 NM_001024806 12607 Mm.24169 NM_009882 ENSMUSG00000024081 Cebpz AI848081|CBF2|Cbf|Cebpa-rs1 CCAAT/enhancer binding protein zeta protein-coding common_peak1_310_2869_0.0602643695710157_11.5169672063486_0.861593346092993 chr16 38087726 38090388 + 0.861593346092993 NA promoter-TSS (NM_019827) promoter-TSS (NM_019827) 56 NM_019827 56637 Mm.394930 NM_019827 ENSMUSG00000022812 Gsk3b 7330414F15Rik|8430431H08Rik|C86142|GSK-3|GSK-3beta|GSK3 glycogen synthase kinase 3 beta protein-coding common_peak1_36_255_-0.22021634878859_7.88989182560571_0.861549155787196 chr7 80765500 80766196 + 0.861549155787196 NA intron (NM_016721, intron 4 of 37) B1F|SINE|Alu 37483 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_123_1041_-0.105232735171489_9.97252319469276_0.861195247743439 chr3 89393557 89395013 + 0.861195247743439 NA promoter-TSS (NR_040404) promoter-TSS (NR_040404) -5 NR_040404 545539 Mm.393389 NR_040403 ENSMUSG00000074466 Gm15417 ENSMUSG00000074466|OTTMUSG00000021274 predicted gene 15417 ncRNA common_peak1_244_2127_0.0696993882878161_11.0901321296451_0.860687521213063 chr6 48645861 48648610 + 0.860687521213063 NA promoter-TSS (NM_001077410) promoter-TSS (NM_001077410) 1 NM_001077410 243374 Mm.86514 NM_212486 ENSMUSG00000064262 Gimap8 Gm457|IAN9|IMAP8 GTPase, IMAP family member 8 protein-coding common_peak1_220_2070_-0.0735706621715071_10.9793265071348_0.860574376663636 chr15 79545744 79546668 + 0.860574376663636 NA exon (NM_199079, exon 1 of 11) exon (NM_199079, exon 1 of 11) 353 NM_199079 67040 Mm.29644 NM_152806 ENSMUSG00000055065 Ddx17 2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 protein-coding common_peak1_108_763_0.114313407493889_9.63458553178269_0.860574291405757 chr11 3289575 3290976 + 0.860574291405757 NA promoter-TSS (NM_001253691) promoter-TSS (NM_001253691) -182 NM_001253690 56218 Mm.275563 NM_019574 ENSMUSG00000020453 Patz1 8430401L15Rik|AI447519|Mazr|Patz|Zfp278 POZ (BTB) and AT hook containing zinc finger 1 protein-coding common_peak1_126_1071_-0.103878496283727_10.0141499423159_0.860439302749945 chr7 28337941 28339386 + 0.860439302749945 NA promoter-TSS (NM_013676) promoter-TSS (NM_013676) 56 NM_013676 20924 Mm.285906 NM_013676 ENSMUSG00000003435 Supt5 AL033283|AL033321|AU019549|Spt5|Supt5h suppressor of Ty 5 protein-coding common_peak1_26_178_-0.261608210424662_7.35301167205193_0.860237862284167 chr7 27689514 27690090 + 0.860237862284167 NA intron (NM_001112731, intron 1 of 5) intron (NM_001112731, intron 1 of 5) 462 NM_001112731 112415 Mm.145362 NM_198417 ENSMUSG00000057093 Zfp607b C030039L03Rik zinc finger protein 607B protein-coding common_peak1_112_932_-0.110213772679359_9.81062638451208_0.860233156858953 chr16 49887735 49889137 + 0.860233156858953 NA intron (NM_010581, intron 4 of 9) Tigger6a|DNA|TcMar-Tigger 32782 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_69_531_-0.147224409791299_8.98167023060554_0.859921943988733 chr19 20389708 20390895 + 0.859921943988733 NA intron (NM_010730, intron 1 of 12) intron (NM_010730, intron 1 of 12) 370 NM_010730 16952 Mm.248360 NM_010730 ENSMUSG00000024659 Anxa1 Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1 annexin A1 protein-coding common_peak2_38_270_-0.20920559174601_7.97754624548087_0.859884398665779-2 chr6 113690476 113691962 + 0.859884398665779 NA intron (NM_001113553, intron 11 of 11) intron (NM_001113553, intron 11 of 11) -6280 NM_001033463 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak2_38_270_-0.20920559174601_7.97754624548087_0.859884398665779 chr6 33617606 33619577 + 0.859884398665779 NA intron (NM_009148, intron 10 of 17) intron (NM_009148, intron 10 of 17) 369441 NM_009148 20336 Mm.265512 NM_009148 ENSMUSG00000029763 Exoc4 C78892|Sec8|Sec8l1 exocyst complex component 4 protein-coding common_peak2_319_2974_0.0589095192935307_11.5681287127294_0.859759660206827 chr2 83720941 83726040 + 0.859759660206827 NA promoter-TSS (NM_008402) promoter-TSS (NM_008402) -907 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak1_340_3220_0.0567706724793435_11.6816782816225_0.859633934265489 chr11 34046317 34049559 + 0.859633934265489 NA intron (NM_010696, intron 1 of 20) intron (NM_010696, intron 1 of 20) 737 NM_010696 16822 Mm.265350 NM_010696 ENSMUSG00000002699 Lcp2 AI323664|BB161688|SLP-76|SLP76|m1Khoe|twm lymphocyte cytosolic protein 2 protein-coding common_peak2_135_1161_-0.0990211588712882_10.1328837739689_0.859570479147962 chr13 30911161 30914660 + 0.859570479147962 NA intron (NM_025588, intron 6 of 27) intron (NM_025588, intron 6 of 27) 34851 NM_153072 210554 Mm.450571 NM_153072 ENSMUSG00000076430 Hus1b - HUS1 checkpoint clamp component B protein-coding common_peak1_125_918_0.104300419849103_9.89607126121359_0.859403974331841 chr17 74489227 74490286 + 0.859403974331841 NA exon (NM_026417, exon 1 of 6) exon (NM_026417, exon 1 of 6) 263 NM_026417 67864 Mm.41891 NM_026417 ENSMUSG00000024072 Yipf4 2310034L04Rik Yip1 domain family, member 4 protein-coding common_peak1_125_918_0.104300419849103_9.89607126121359_0.859403974331841-2 chr9 122117130 122118289 + 0.859403974331841 NA intron (NM_001164572, intron 1 of 5) CpG 443 NM_133741 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak2_39_208_0.21038740673625_7.81255283544901_0.859389085069544 chr1 34851064 34852735 + 0.859389085069544 NA intron (NM_145516, intron 1 of 7) intron (NM_145516, intron 1 of 7) 1940 NM_145516 226971 Mm.292751 NM_145516 ENSMUSG00000026123 Plekhb2 2310009M15Rik|AU018239|Evt2|Phdc|evt-2 pleckstrin homology domain containing, family B (evectins) member 2 protein-coding common_peak2_39_208_0.21038740673625_7.81255283544901_0.859389085069544-2 chr9 53786527 53787580 + 0.859389085069544 NA intron (NM_028060, intron 1 of 7) intron (NM_028060, intron 1 of 7) 15518 NM_028060 72022 Mm.26159 NM_028060 ENSMUSG00000042195 Slc35f2 1500009K05Rik|AU019213 solute carrier family 35, member F2 protein-coding common_peak1_191_1565_0.0807439043601228_10.6532404494711_0.859376966495569 chr1 75520942 75522365 + 0.859376966495569 NA intron (NM_027886, intron 1 of 24) CpG 124 NM_027886 71728 Mm.312650 NM_027886 ENSMUSG00000026213 Stk11ip 1200014D22Rik|BB131189|LIP1|LKB1IP serine/threonine kinase 11 interacting protein protein-coding common_peak1_96_779_-0.121991950386201_9.54633433855651_0.859153731170848 chr7 143627573 143629337 + 0.859153731170848 NA promoter-TSS (NM_175649) promoter-TSS (NM_175649) -610 NM_175649 244237 Mm.247498 NM_175649 ENSMUSG00000045362 Tnfrsf26 Tnfrh3|Tnfrsf24 tumor necrosis factor receptor superfamily, member 26 protein-coding common_peak2_181_1463_0.0832575156223605_10.5573285960952_0.859035049596464 chr1 171118374 171121149 + 0.859035049596464 NA Intergenic Intergenic -1900 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak2_111_790_0.112255487917846_9.68366162843171_0.858893814490325 chr18 67439675 67442416 + 0.858893814490325 NA intron (NM_027130, intron 3 of 16) intron (NM_027130, intron 3 of 16) 8091 NM_027130 69597 Mm.426052 NM_027130 ENSMUSG00000024527 Afg3l2 2310036I02Rik|AW260507|Emv66|par AFG3-like AAA ATPase 2 protein-coding unique_peak2_12_80_-0.411041069430047_6.1343294681696_0.858683394889009-2 chr15 41612524 41613168 + 0.858683394889009 NA intron (NM_001130166, intron 2 of 16) intron (NM_001130166, intron 2 of 16) 165364 NM_001130166 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak2_12_80_-0.411041069430047_6.1343294681696_0.858683394889009-3 chr15 73746351 73747099 + 0.858683394889009 NA intron (NM_001166388, intron 1 of 5) intron (NM_001166388, intron 1 of 5) -1301 NM_008975 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding unique_peak2_12_80_-0.411041069430047_6.1343294681696_0.858683394889009 chr11 52293662 52294306 + 0.858683394889009 NA Intergenic Intergenic -10970 NM_001313981 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak1_12_80_-0.411041069430047_6.1343294681696_0.858683394889009 chr8 33928136 33928500 + 0.858683394889009 NA intron (NM_001286168, intron 1 of 7) intron (NM_001286168, intron 1 of 7) 1545 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak2_81_639_-0.133872518635579_9.25499183556957_0.858486866984769 chr19 8797549 8799426 + 0.858486866984769 NA promoter-TSS (NM_026329) promoter-TSS (NM_026329) 70 NM_026329 67710 Mm.22117 NM_026329 ENSMUSG00000071662 Polr2g 2410046K11Rik|A230108L04Rik|C76415|RBP7|Rpo2-7l polymerase (RNA) II (DNA directed) polypeptide G protein-coding common_peak1_146_1117_0.0943062802207777_10.1738576129536_0.858236534298391 chr1 128590483 128592247 + 0.858236534298391 NA intron (NM_009911, intron 1 of 1) CpG 934 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak2_55_323_0.173327058319657_8.42651353204445_0.858131746010827 chr6 50110151 50111424 + 0.858131746010827 NA intron (NM_001164734, intron 1 of 13) intron (NM_001164734, intron 1 of 13) 546 NM_001164733 56524 Mm.41288 NM_008016 ENSMUSG00000038388 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) protein-coding common_peak2_137_1031_0.0979803760098967_10.0602174434282_0.857835365056791 chr1 185202942 185205847 + 0.857835365056791 NA intron (NM_001163754, intron 1 of 34) CpG 226 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding common_peak2_31_216_-0.238685658132956_7.642208403378_0.85752141242748 chr17 12371494 12372244 + 0.85752141242748 NA Intergenic Intergenic -6740 NM_008877 18815 Mm.971 NM_008877 ENSMUSG00000059481 Plg AI649309|Pg plasminogen protein-coding common_peak1_31_216_-0.238685658132956_7.642208403378_0.85752141242748 chr5 138172081 138172520 + 0.85752141242748 NA promoter-TSS (NM_008568) promoter-TSS (NM_008568) 279 NM_021392 11781 Mm.113205 NM_021392 ENSMUSG00000019518 Ap4m1 4930443L05Rik|Ap4m4 adaptor-related protein complex AP-4, mu 1 protein-coding common_peak2_234_2019_0.0710970966651789_11.0156881259717_0.857405914683325 chr11 79253000 79255371 + 0.857405914683325 NA intron (NM_019653, intron 1 of 8) CpG 510 NM_019653 78889 Mm.307022 NM_019653 ENSMUSG00000017677 Wsb1 1110056B13Rik|2700038M07Rik WD repeat and SOCS box-containing 1 protein-coding common_peak1_23_156_-0.280845280799532_7.15419810849186_0.857303629372324-2 chr3 54692098 54692590 + 0.857303629372324 NA promoter-TSS (NM_019995) promoter-TSS (NM_019995) -761 NM_019995 56790 Mm.486375 NM_019995 ENSMUSG00000027751 Supt20 AA667204|AI450544|D3Ertd300e|Fam48a|Supt20h|p38IP suppressor of Ty 20 protein-coding common_peak1_23_156_-0.280845280799532_7.15419810849186_0.857303629372324 chr13 114885298 114885832 + 0.857303629372324 NA intron (NM_008396, intron 3 of 29) intron (NM_008396, intron 3 of 29) 46476 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak2_232_2205_-0.0711055147175337_11.0716643182326_0.857193933295281 chr15 52748982 52754827 + 0.857193933295281 NA Intergenic RLTR49|LTR|ERVK 39459 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak2_40_286_-0.203463661610262_8.06317509587056_0.857127196281205 chr7 19344355 19345577 + 0.857127196281205 NA promoter-TSS (NM_001127324) promoter-TSS (NM_001127324) -105 NM_001127324 13870 Mm.280913 NM_007948 ENSMUSG00000003549 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 protein-coding common_peak2_157_1387_-0.0900804502785881_10.393751627439_0.85701833407552 chr2 181186419 181188868 + 0.85701833407552 NA 5' UTR (NM_025598, exon 2 of 5) 5' UTR (NM_025598, exon 2 of 5) 300 NM_025598 66496 Mm.213943 NM_025598 ENSMUSG00000016344 Ppdpf 0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik pancreatic progenitor cell differentiation and proliferation factor protein-coding common_peak2_53_308_0.177356850121576_8.36014145296516_0.856984037014262 chr4 55532083 55533774 + 0.856984037014262 NA promoter-TSS (NM_010637) promoter-TSS (NM_010637) -453 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding common_peak1_32_161_0.237469944776255_7.45858497527275_0.856910110527024 chr11 29647659 29648454 + 0.856910110527024 NA Intergenic Intergenic -44842 NM_194053 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding common_peak1_32_161_0.237469944776255_7.45858497527275_0.856910110527024-2 chr11 54942951 54943713 + 0.856910110527024 NA intron (NM_021327, intron 1 of 17) intron (NM_021327, intron 1 of 17) 19608 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak1_41_222_0.20318705506455_7.90249342745258_0.85686001731979 chr10 7589159 7589754 + 0.85686001731979 NA promoter-TSS (NM_172784) promoter-TSS (NM_172784) -344 NM_172784 237253 Mm.206759 NM_172784 ENSMUSG00000019796 Lrp11 1700034J19Rik|6330533B21|9830160H19Rik low density lipoprotein receptor-related protein 11 protein-coding common_peak1_304_2801_0.0603837974944739_11.4824331391781_0.856593451902897 chr6 87809698 87812375 + 0.856593451902897 NA intron (NR_104478, intron 1 of 2) CpG 743 NM_001039394 69834 Mm.37380 NM_133717 ENSMUSG00000030055 Rab43 1810048P08Rik|2500004H21Rik|AW490415 RAB43, member RAS oncogene family protein-coding common_peak2_170_1524_-0.0859602916341515_10.5316133815205_0.856188399338769 chr16 56036947 56038532 + 0.856188399338769 NA promoter-TSS (NM_029092) promoter-TSS (NM_029092) 35 NM_029092 52575 Mm.288742 NM_029092 ENSMUSG00000044763 Trmt10c 1300018J16Rik|D16Ertd454e|Rg9mtd1|Rnmtd1 tRNA methyltransferase 10C protein-coding common_peak1_117_845_0.107624863108231_9.77832628467407_0.855959048051144 chr9 40993063 40994815 + 0.855959048051144 NA intron (NM_001281954, intron 2 of 9) intron (NM_001281954, intron 2 of 9) 10689 NM_001281954 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak1_20_135_-0.309988197451841_6.93246874252442_0.855942378259451-3 chrX 74312569 74313024 + 0.855942378259451 NA promoter-TSS (NM_138607) promoter-TSS (NM_138607) -237 NM_138607 108160 Mm.4370 NM_138607 ENSMUSG00000001962 Fam50a D0HXS9928E|XAP-5 family with sequence similarity 50, member A protein-coding unique_peak2_20_135_-0.309988197451841_6.93246874252442_0.855942378259451-2 chr2 106973822 106974664 + 0.855942378259451 NA intron (NM_001025102, intron 1 of 4) CpG 154 NM_001025102 212772 Mm.381231 NM_173750 ENSMUSG00000027122 Arl14ep 2700007P21Rik|4930448O08Rik|ARF7EP ADP-ribosylation factor-like 14 effector protein protein-coding common_peak1_20_135_-0.309988197451841_6.93246874252442_0.855942378259451 chr17 72939133 72939590 + 0.855942378259451 NA exon (NM_029999, exon 3 of 3) exon (NM_029999, exon 3 of 3) 21056 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_20_135_-0.309988197451841_6.93246874252442_0.855942378259451-2 chrX 50580424 50580975 + 0.855942378259451 NA non-coding (NR_015505, exon 15 of 20) non-coding (NR_015505, exon 15 of 20) 43310 NR_131207 102639259 Mm.350898 NR_131207 Gm35612 - predicted gene, 35612 ncRNA unique_peak2_20_135_-0.309988197451841_6.93246874252442_0.855942378259451 chr12 76886500 76887392 + 0.855942378259451 NA intron (NM_145927, intron 4 of 11) ORR1E|LTR|ERVL-MaLR 49479 NM_145927 110606 Mm.151174 NM_145927 ENSMUSG00000033373 Fntb 2010013E13Rik|AA409500 farnesyltransferase, CAAX box, beta protein-coding common_peak1_18_76_0.333577662701989_6.4335753720459_0.855934641417003 chr12 76306344 76306797 + 0.855934641417003 NA intron (NM_138745, intron 21 of 27) intron (NM_138745, intron 21 of 27) -18321 NM_001101471 238276 Mm.311452 NM_001101471 ENSMUSG00000021057 Akap5 3526401B18Rik|AKAP 150|AKAP-5|AKAP150|BB098886|Gm258|P150 A kinase (PRKA) anchor protein 5 protein-coding unique_peak2_18_76_0.333577662701989_6.4335753720459_0.855934641417003 chr11 98587368 98587902 + 0.855934641417003 NA promoter-TSS (NM_025661) promoter-TSS (NM_025661) -390 NM_025661 66612 Mm.180546 NM_025661 ENSMUSG00000038150 Ormdl3 2810011N17Rik|AI315223 ORM1-like 3 (S. cerevisiae) protein-coding common_peak2_18_76_0.333577662701989_6.4335753720459_0.855934641417003 chr8 3493086 3493620 + 0.855934641417003 NA intron (NM_080461, intron 1 of 1) CpG 215 NM_080461 140482 Mm.299073 NM_080461 ENSMUSG00000047264 Zfp358 Zfend zinc finger protein 358 protein-coding common_peak1_18_76_0.333577662701989_6.4335753720459_0.855934641417003-3 chr8 11106561 11107037 + 0.855934641417003 NA Intergenic Intergenic -98369 NM_001081212 384783 Mm.407207 NM_001081212 ENSMUSG00000038894 Irs2 Irs-2 insulin receptor substrate 2 protein-coding common_peak1_18_76_0.333577662701989_6.4335753720459_0.855934641417003-2 chr17 84271738 84272206 + 0.855934641417003 NA intron (NM_183021, intron 30 of 37) B1_Mur4|SINE|Alu -84025 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_151_1325_-0.0926639231566302_10.3265330985343_0.855696869055742 chr13 52588424 52593570 + 0.855696869055742 NA intron (NM_001198977, intron 1 of 13) intron (NM_001198977, intron 1 of 13) -5885 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding unique_peak2_42_302_-0.197446813219001_8.14445057686345_0.855440955610537 chr1 38128804 38130228 + 0.855440955610537 NA 5' UTR (NM_019570, exon 1 of 23) 5' UTR (NM_019570, exon 1 of 23) 146 NM_019570 56210 Mm.389103 NM_019570 ENSMUSG00000026082 Rev1 1110027I23Rik|AU022044|Rev1l REV1, DNA directed polymerase protein-coding common_peak2_42_302_-0.197446813219001_8.14445057686345_0.855440955610537-2 chr4 72199687 72200964 + 0.855440955610537 NA promoter-TSS (NR_027923) promoter-TSS (NR_027923) 568 NM_011599 21885 Mm.278444 NM_011599 ENSMUSG00000008305 Tle1 C230057C06Rik|Estm14|Grg-1|Grg1|Tle4l transducin-like enhancer of split 1 protein-coding common_peak2_42_302_-0.197446813219001_8.14445057686345_0.855440955610537 chr1 74226953 74228181 + 0.855440955610537 NA Intergenic Intergenic -8983 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak1_47_264_0.190539229827889_8.14511816436451_0.855440955610438 chr2 127182559 127183514 + 0.855440955610438 NA Intergenic Intergenic 25244 NM_198630 329509 Mm.120738 NM_198630 ENSMUSG00000044145 1810024B03Rik - RIKEN cDNA 1810024B03 gene protein-coding common_peak1_45_250_0.193529561329093_8.06830833461532_0.855052777225608 chr6 114659648 114660689 + 0.855052777225608 NA intron (NM_001253718, intron 2 of 19) intron (NM_001253718, intron 2 of 19) 17071 NM_001253717 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding common_peak2_45_250_0.193529561329093_8.06830833461532_0.855052777225608 chr13 95614178 95615740 + 0.855052777225608 NA intron (NM_010169, intron 1 of 1) intron (NM_010169, intron 1 of 1) 3474 NM_010169 14062 Mm.24816 NM_010169 ENSMUSG00000048376 F2r AI482343|Cf2r|Par1|ThrR coagulation factor II (thrombin) receptor protein-coding common_peak1_49_279_0.183344486377774_8.22095526013385_0.854658591210638 chr7 127573288 127574256 + 0.854658591210638 NA intron (NM_026888, intron 1 of 9) intron (NM_026888, intron 1 of 9) 424 NM_026888 68961 Mm.274473 NM_026888 ENSMUSG00000030815 Phkg2 1500017I02Rik phosphorylase kinase, gamma 2 (testis) protein-coding common_peak1_65_496_-0.15316978271505_8.88051715020476_0.854164034611056 chr2 45019129 45020468 + 0.854164034611056 NA intron (NM_001289521, intron 2 of 8) intron (NM_001289521, intron 2 of 8) 3379 NR_039591 100628598 NR_039591 ENSMUSG00000092679 Mir5129 mir-5129|mmu-mir-5129|mu-mir-5129 microRNA 5129 ncRNA common_peak1_48_351_-0.182555381726612_8.36815392777399_0.853615377676348 chr19 8897306 8898009 + 0.853615377676348 NA promoter-TSS (NM_008060) promoter-TSS (NM_008060) -400 NM_001293621 14376 Mm.3196 NM_008060 ENSMUSG00000071650 Ganab AU042638|G2an|GluII|mKIAA0088 alpha glucosidase 2 alpha neutral subunit protein-coding common_peak1_64_393_0.154862700876521_8.69948316989464_0.853575598047943 chr10 83954293 83954738 + 0.853575598047943 NA Intergenic (CATTC)n|Simple_repeat|Simple_repeat 231650 NM_001145198 69784 Mm.271188 NM_001145198 ENSMUSG00000087651 1500009L16Rik 2700050C19Rik|OCC-1 RIKEN cDNA 1500009L16 gene protein-coding common_peak2_252_2433_-0.0672712354923668_11.2154778349675_0.853535445900227 chr11 77606343 77608655 + 0.853535445900227 NA 5' UTR (NM_144825, exon 1 of 20) 5' UTR (NM_144825, exon 1 of 20) 316 NM_144825 216965 Mm.340436 NM_144825 ENSMUSG00000017291 Taok1 2810468K05Rik|AU020252|D130018F14Rik|Map3k16|Markk|Psk2|mKIAA1361 TAO kinase 1 protein-coding common_peak2_228_1955_0.0717772398059395_10.9695792748552_0.853349405920699 chr13 91369759 91372549 + 0.853349405920699 NA non-coding (NR_045161, exon 3 of 3) non-coding (NR_045161, exon 3 of 3) 16931 NR_045161 320297 Mm.375866 NR_045161 ENSMUSG00000097182 A830009L08Rik - RIKEN cDNA A830009L08 gene ncRNA common_peak1_50_368_-0.179806228932939_8.43757389159393_0.853309384800306 chr15 78531648 78532355 + 0.853309384800306 NA Intergenic Intergenic -2350 NM_028331 72709 Mm.34776 NM_028331 ENSMUSG00000022440 C1qtnf6 2810036M19Rik|CTRP6 C1q and tumor necrosis factor related protein 6 protein-coding common_peak1_72_558_-0.144385446457562_9.05451174961441_0.853097761840011 chr16 44812371 44813348 + 0.853097761840011 NA Intergenic Intergenic -7869 NM_207244 239849 Mm.445045 NM_207244 ENSMUSG00000062082 Cd200r4 F630107N04Rik|MCD200RLa CD200 receptor 4 protein-coding common_peak1_88_589_0.128447224514984_9.2687947565067_0.853062147994332 chr2 32362726 32363885 + 0.853062147994332 NA 5' UTR (NM_001252534, exon 1 of 18) 5' UTR (NM_001252534, exon 1 of 18) 107 NM_028412 68379 Mm.170508 NM_028412 ENSMUSG00000039205 Ciz1 0610038H21Rik|2900056O04Rik|LSFR1|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding common_peak1_71_448_0.147338349504233_8.88424080949326_0.852992328507095 chr2 90917285 90918394 + 0.852992328507095 NA exon (NM_025576, exon 1 of 4) exon (NM_025576, exon 1 of 4) 211 NM_025576 66461 Mm.23926 NM_025576 Ptpmt1 1110001D10Rik|2810004N20Rik|PLIP protein tyrosine phosphatase, mitochondrial 1 protein-coding common_peak2_46_335_-0.189186335352742_8.29772425510239_0.852886179116951 chr6 122257620 122259082 + 0.852886179116951 NA Intergenic Intergenic 24482 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak1_33_231_-0.227832422967045_7.74406478364405_0.852794815133733 chr10 78086205 78087039 + 0.852794815133733 NA Intergenic Intergenic 17254 NM_015790 50723 Mm.17819 NM_015790 ENSMUSG00000000732 Icosl AU044799|B7-H2|B7RP-1|B7h|BG071784|GI50|GL50|GL50-B|ICOS-L|Icoslg|LICOS|Ly115l|mKIAA0653 icos ligand protein-coding common_peak1_14_55_0.374689199353744_5.99469952173448_0.852510036703126-2 chr18 37929992 37930403 + 0.852510036703126 NA intron (NM_001305981, intron 1 of 28) intron (NM_001305981, intron 1 of 28) 5226 NM_001305980 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding unique_peak2_11_73_-0.422290208723211_5.99830826126735_0.852510036703126-2 chr11 109487603 109488229 + 0.852510036703126 NA intron (NM_028710, intron 3 of 13) B1_Mur1|SINE|Alu -14320 NM_001029842 104681 Mm.265874 NM_134038 ENSMUSG00000041920 Slc16a6 AW743111|ESTM12|MCT 6|MCT 7|MCT6 solute carrier family 16 (monocarboxylic acid transporters), member 6 protein-coding unique_peak1_14_55_0.374689199353744_5.99469952173448_0.852510036703126 chr5 38927525 38927921 + 0.852510036703126 NA Intergenic RMER13B|LTR|ERVK -51030 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding unique_peak2_11_73_-0.422290208723211_5.99830826126735_0.852510036703126 chr11 75189870 75190519 + 0.852510036703126 NA intron (NM_144491, intron 1 of 12) intron (NM_144491, intron 1 of 12) 289 NM_144491 116905 Mm.41496 NM_144491 ENSMUSG00000078789 Dph1 2310011M22Rik|4930488F09Rik|AW551873|Dph2l1|Ovca1 diphthamide biosynthesis 1 protein-coding common_peak1_14_55_0.374689199353744_5.99469952173448_0.852510036703126-3 chr8 70766425 70766837 + 0.852510036703126 NA promoter-TSS (NM_023065) promoter-TSS (NM_023065) 32 NM_023065 65972 Mm.30241 NM_023065 ENSMUSG00000031838 Ifi30 GILT|IP30 interferon gamma inducible protein 30 protein-coding common_peak1_14_55_0.374689199353744_5.99469952173448_0.852510036703126 chr11 11668087 11668428 + 0.852510036703126 NA Intergenic Intergenic -17668 NM_009578 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_63_478_-0.1544039602383_8.82667986561703_0.852286081228312 chr8 70537955 70538908 + 0.852286081228312 NA Intergenic Intergenic -1244 NM_007924 13716 Mm.271973 NM_007924 ENSMUSG00000070002 Ell Ell1|Men elongation factor RNA polymerase II protein-coding common_peak1_63_478_-0.1544039602383_8.82667986561703_0.852286081228312-2 chr9 114639397 114640244 + 0.852286081228312 NA intron (NM_153585, intron 1 of 19) intron (NM_153585, intron 1 of 19) 380 NM_153585 78893 Mm.283708 NM_153585 ENSMUSG00000056167 Cnot10 2600001P13Rik CCR4-NOT transcription complex, subunit 10 protein-coding common_peak2_63_478_-0.1544039602383_8.82667986561703_0.852286081228312 chr5 143234727 143236063 + 0.852286081228312 NA TTS (NR_040700) TTS (NR_040700) 232 NM_177681 231866 Mm.55211 NM_177681 ENSMUSG00000029587 Zfp12 C530015C18|Krox-7|Zfp-12|Znf12 zinc finger protein 12 protein-coding common_peak2_63_478_-0.1544039602383_8.82667986561703_0.852286081228312-2 chr7 126928027 126929519 + 0.852286081228312 NA promoter-TSS (NM_172747) promoter-TSS (NM_172747) -106 NM_172747 233877 Mm.245897 NM_172747 ENSMUSG00000030685 Kctd13 1500003N18Rik|AV259508|PDIP1alpha|Pdip1|Poldip1 potassium channel tetramerisation domain containing 13 protein-coding unique_peak2_21_93_0.305208891016314_6.70719329718579_0.85176625806429 chr10 96597949 96598677 + 0.85176625806429 NA Intergenic Intergenic -18688 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_21_93_0.305208891016314_6.70719329718579_0.85176625806429-5 chr6 113656800 113657328 + 0.85176625806429 NA intron (NM_001113553, intron 2 of 11) intron (NM_001113553, intron 2 of 11) 18597 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding unique_peak2_21_93_0.305208891016314_6.70719329718579_0.85176625806429-3 chr6 48734445 48735411 + 0.85176625806429 NA Intergenic Intergenic -4119 NM_175860 16205 Mm.252599 NM_008376 ENSMUSG00000090019 Gimap1 IAP38|Imap38|imap GTPase, IMAP family member 1 protein-coding common_peak1_21_93_0.305208891016314_6.70719329718579_0.85176625806429-2 chr1 181227013 181227477 + 0.85176625806429 NA Intergenic Intergenic -15267 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak2_21_93_0.305208891016314_6.70719329718579_0.85176625806429 chr13 73467234 73467853 + 0.85176625806429 NA intron (NM_145376, intron 1 of 13) CpG 160 NM_145376 210992 Mm.284649 NM_145376 ENSMUSG00000021608 Lpcat1 2900035H07Rik|Aytl2|BB137372|BC005662|C87117|LPCAT|rd11 lysophosphatidylcholine acyltransferase 1 protein-coding unique_peak2_21_93_0.305208891016314_6.70719329718579_0.85176625806429-2 chr15 74992081 74992794 + 0.85176625806429 NA Intergenic Intergenic 5594 NM_001271417 110454 Mm.425949 NM_010738 ENSMUSG00000075602 Ly6a Ly-6A.2|Ly-6A/E|Ly-6E.1|Sca-1|Sca1|TAP lymphocyte antigen 6 complex, locus A protein-coding common_peak1_21_93_0.305208891016314_6.70719329718579_0.85176625806429-4 chr14 25693593 25693995 + 0.85176625806429 NA promoter-TSS (NM_134084) promoter-TSS (NM_134084) -376 NM_134084 105675 Mm.41656 NM_134084 ENSMUSG00000021868 Ppif AW457192|CyP-D|CyP-F|CypD|PPIase peptidylprolyl isomerase F (cyclophilin F) protein-coding common_peak1_21_93_0.305208891016314_6.70719329718579_0.85176625806429 chr1 164307711 164308191 + 0.85176625806429 NA promoter-TSS (NM_025505) promoter-TSS (NM_025505) 279 NM_178071 171567 Mm.219428 NM_138314 ENSMUSG00000026575 Nme7 D530024H21Rik|Nm23-M7|Nm23-r7 NME/NM23 family member 7 protein-coding common_peak1_21_93_0.305208891016314_6.70719329718579_0.85176625806429-3 chr10 81302964 81303567 + 0.85176625806429 NA intron (NM_001293646, intron 1 of 18) intron (NM_001293646, intron 1 of 18) 10302 NM_001146687 18717 Mm.24222 NM_008844 ENSMUSG00000034902 Pip5k1c AI115456|AI835305|Pip5kIgamma phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma protein-coding unique_peak2_21_93_0.305208891016314_6.70719329718579_0.85176625806429-4 chr7 132316462 132317295 + 0.85176625806429 NA non-coding (NR_028578, exon 1 of 1) non-coding (NR_028578, exon 1 of 1) 277 NM_029935 77590 Mm.213582 NM_029935 ENSMUSG00000030930 Chst15 4631426J05Rik|BRAG|GalNAcS-6ST|MAd5|mKIAA0598 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 protein-coding common_peak2_280_2759_-0.0628610644644709_11.3990220194333_0.851439384989605 chr5 140997972 141001598 + 0.851439384989605 NA intron (NM_175362, intron 1 of 24) intron (NM_175362, intron 1 of 24) 811 NM_175362 108723 Mm.46187 NM_175362 ENSMUSG00000036526 Card11 0610008L17Rik|2410011D02Rik|BIMP3|CARMA1 caspase recruitment domain family, member 11 protein-coding common_peak1_24_111_0.27866027007878_6.94668505709699_0.85143365319847-3 chr13 44607439 44608037 + 0.85143365319847 NA Intergenic Intergenic -123036 NM_021878 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding common_peak2_24_111_0.27866027007878_6.94668505709699_0.85143365319847 chr8 36158503 36159420 + 0.85143365319847 NA Intergenic Intergenic 64133 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_24_111_0.27866027007878_6.94668505709699_0.85143365319847 chr10 99127612 99128142 + 0.85143365319847 NA intron (NM_027740, intron 3 of 11) intron (NM_027740, intron 3 of 11) 19742 NM_015737 14426 Mm.314 NM_015737 ENSMUSG00000090035 Galnt4 AV011803 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 protein-coding unique_peak2_24_111_0.27866027007878_6.94668505709699_0.85143365319847-2 chrX 21360694 21361595 + 0.85143365319847 NA non-coding (NR_045668, exon 1 of 2) non-coding (NR_045668, exon 1 of 2) 279 NR_045668 331392 Mm.23126 NM_198633 ENSMUSG00000051537 Gm5124 EG331392 nucleolar and coiled-body phosphoprotein 1 pseudogene pseudo common_peak1_24_111_0.27866027007878_6.94668505709699_0.85143365319847-5 chr4 132807669 132808350 + 0.85143365319847 NA Intergenic B3A|SINE|B2 -11645 NM_001033308 230787 Mm.290912 NM_001033308 ENSMUSG00000037731 Themis2 ICB-1 thymocyte selection associated family member 2 protein-coding unique_peak2_24_111_0.27866027007878_6.94668505709699_0.85143365319847 chr2 120849829 120850629 + 0.85143365319847 NA promoter-TSS (NR_038349) promoter-TSS (NR_038349) 189 NM_001024857 140810 Mm.275698 NM_080788 ENSMUSG00000090100 Ttbk2 2610507N02Rik|AI326283|B930008N24Rik|TTK|Ttbk|Ttbk1|mKIAA0847 tau tubulin kinase 2 protein-coding common_peak1_24_111_0.27866027007878_6.94668505709699_0.85143365319847-4 chr18 75489635 75490134 + 0.85143365319847 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -24761 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA common_peak1_24_111_0.27866027007878_6.94668505709699_0.85143365319847-2 chr11 118220648 118221244 + 0.85143365319847 NA intron (NM_011180, intron 1 of 12) PB1D9|SINE|Alu -8204 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak2_149_1303_-0.0919661347550527_10.3027450868536_0.851297121773547 chr6 85914851 85916904 + 0.851297121773547 NA promoter-TSS (NM_023160) promoter-TSS (NM_023160) 158 NM_001170488 69786 Mm.218434 NM_176842 ENSMUSG00000054226 Tprkb 0610033G21Rik|1810034M08Rik|Cgi-121|DRWMS1|mDRWMS1 Tp53rk binding protein protein-coding common_peak2_108_893_-0.112388785653682_9.74793662835648_0.85110304415474 chr8 84103808 84105848 + 0.85110304415474 NA promoter-TSS (NM_172502) promoter-TSS (NM_172502) -66 NM_172502 212123 Mm.260557 NM_172502 ENSMUSG00000037103 Dcaf15 6720484B16 DDB1 and CUL4 associated factor 15 protein-coding common_peak2_157_1224_0.0901453684097397_10.3036387180948_0.850861638386151 chr11 5836839 5838618 + 0.850861638386151 NA exon (NM_017401, exon 1 of 11) exon (NM_017401, exon 1 of 11) 288 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding unique_peak2_28_193_-0.25124952767456_7.47428807834985_0.850649330043314 chr10 77032495 77033835 + 0.850649330043314 NA promoter-TSS (NM_031196) promoter-TSS (NM_031196) -47 NM_031196 20509 Mm.265060 NM_031196 ENSMUSG00000001436 Slc19a1 AI323572|RFC|RFC-1|RFC1 solute carrier family 19 (folate transporter), member 1 protein-coding common_peak2_87_694_-0.127846802544207_9.37694576633877_0.850439790595551 chr9 15356912 15358455 + 0.850439790595551 NA exon (NM_176976, exon 1 of 27) exon (NM_176976, exon 1 of 27) 105 NM_176976 319675 Mm.218317 NM_176976 ENSMUSG00000046111 Cep295 5830418K08Rik|5832426L23Rik|Gm1131|Kiaa1731 centrosomal protein 295 protein-coding common_peak1_70_540_-0.146325237979799_9.00632216483692_0.850137319210472 chr10 128083275 128084100 + 0.850137319210472 NA intron (NM_016774, intron 1 of 9) CpG 380 NM_016774 11947 Mm.238973 NM_016774 ENSMUSG00000025393 Atp5b - ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit protein-coding common_peak1_131_1120_-0.100025992771835_10.0805575664195_0.850120355516602 chr9 107552901 107554502 + 0.850120355516602 NA promoter-TSS (NM_019713) promoter-TSS (NM_019713) -882 NM_019713 56289 Mm.12091 NM_019713 ENSMUSG00000010067 Rassf1 123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family member 1 protein-coding common_peak1_154_1195_0.0907861174145221_10.2693947329054_0.850016333807718 chr7 4082326 4083691 + 0.850016333807718 NA intron (NR_033568, intron 6 of 8) intron (NR_033568, intron 6 of 8) -19804 NM_001302676 52855 Mm.290880 NM_178611 ENSMUSG00000055541 Lair1 5133400O11Rik|BB115266|D7Bwg0421e|Lair-1 leukocyte-associated Ig-like receptor 1 protein-coding common_peak2_185_1684_-0.0811038439952743_10.6779809540716_0.849833011239966 chr2 131209469 131211411 + 0.849833011239966 NA promoter-TSS (NM_027129) promoter-TSS (NM_027129) 80 NR_110992 69596 Mm.2937 NM_027129 ENSMUSG00000068264 Ap5s1 0610038L13Rik|2310035K24Rik|AW060727|sigma5 adaptor-related protein 5 complex, sigma 1 subunit protein-coding common_peak2_303_2790_0.0602470390762484_11.4766899286042_0.849653029484314 chr3 106720984 106723481 + 0.849653029484314 NA intron (NM_028081, intron 1 of 2) CpG 550 NM_001286685 321000 Mm.259638 NM_028081 ENSMUSG00000056260 Lrif1 2010012G17Rik|4933421E11Rik|AI450568 ligand dependent nuclear receptor interacting factor 1 protein-coding unique_peak2_16_107_-0.351351241189296_6.57921188156882_0.849626150099163-3 chrX 48343633 48344270 + 0.849626150099163 NA intron (NM_178782, intron 2 of 14) CpG 2593 NM_178782 320376 Mm.210146 NM_178782 ENSMUSG00000036959 Bcorl1 6720425J07Rik|B930011H20Rik BCL6 co-repressor-like 1 protein-coding unique_peak2_16_107_-0.351351241189296_6.57921188156882_0.849626150099163 chr13 67421120 67421847 + 0.849626150099163 NA promoter-TSS (NM_177811) promoter-TSS (NM_177811) -65 NM_177811 328274 Mm.222470 NM_177811 ENSMUSG00000055560 Zfp459 9930025G17Rik|Rslcan-14 zinc finger protein 459 protein-coding unique_peak2_16_107_-0.351351241189296_6.57921188156882_0.849626150099163-2 chr8 122911470 122912274 + 0.849626150099163 NA intron (NR_037865, intron 3 of 13) intron (NR_037865, intron 3 of 13) 63498 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding common_peak1_35_246_-0.217069558525655_7.83983245232185_0.849617948321648 chr11 100619728 100620226 + 0.849617948321648 NA 5' UTR (NM_019795, exon 1 of 14) 5' UTR (NM_019795, exon 1 of 14) 191 NM_019795 56354 Mm.402409 NM_019795 ENSMUSG00000014195 Dnajc7 2010003F24Rik|2010004G07Rik|CCRP|Ttc2|mDj11|mTpr2 DnaJ heat shock protein family (Hsp40) member C7 protein-coding common_peak1_91_615_0.124898885771321_9.32923598358056_0.849392243314009 chr12 110695497 110696377 + 0.849392243314009 NA intron (NM_010480, intron 1 of 10) CpG 458 NM_010480 15519 Mm.1843 NM_010480 ENSMUSG00000021270 Hsp90aa1 86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4 heat shock protein 90, alpha (cytosolic), class A member 1 protein-coding common_peak2_148_1136_0.0939084632153726_10.1979707704999_0.849219292912364 chr8 117497927 117499915 + 0.849219292912364 NA intron (NM_172285, intron 1 of 32) intron (NM_172285, intron 1 of 32) 630 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak1_213_1991_-0.0744192015259522_10.9227923313051_0.849186251615034 chr1 160211873 160213876 + 0.849186251615034 NA promoter-TSS (NM_009786) promoter-TSS (NM_009786) 18 NM_009786 12301 Mm.10702 NM_009786 ENSMUSG00000014226 Cacybp SIP calcyclin binding protein protein-coding common_peak2_213_1991_-0.0744192015259522_10.9227923313051_0.849186251615034 chr14 54479030 54482649 + 0.849186251615034 NA TTS (NM_080726) TTS (NM_080726) 4739 NM_080726 140743 Mm.274727 NM_080726 ENSMUSG00000022176 Rem2 AW411893 rad and gem related GTP binding protein 2 protein-coding common_peak2_326_3310_-0.057174543714078_11.66446402354_0.849084669040507 chr13 97437979 97444257 + 0.849084669040507 NA intron (NR_110432, intron 1 of 1) MLT1D|LTR|ERVL-MaLR 6148 NR_110432 100039691 Mm.219358 NR_110430 ENSMUSG00000078952 Lncenc1 ENSMUSG00000078952|Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1 long non-coding RNA, embryonic stem cells expressed 1 ncRNA common_peak2_107_755_0.113189764991235_9.61883730671669_0.849083371855713 chr10 23786270 23788172 + 0.849083371855713 NA promoter-TSS (NM_011295) promoter-TSS (NM_011295) -12 NM_011295 20042 Mm.371846 NM_011295 ENSMUSG00000061983 Rps12 - ribosomal protein S12 protein-coding common_peak2_159_1407_-0.0884604574474519_10.4152013899136_0.848872440344812 chrX 94211935 94213938 + 0.848872440344812 NA promoter-TSS (NM_012010) promoter-TSS (NM_012010) -285 NM_012010 26905 Mm.218851 NM_012010 ENSMUSG00000035150 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked protein-coding common_peak1_60_362_0.160693713051222_8.58417259452136_0.848721846746886 chr9 40344732 40345646 + 0.848721846746886 NA intron (NM_172768, intron 2 of 19) intron (NM_172768, intron 2 of 19) 11717 NR_040728 73558 Mm.398307 NR_040728 1700110K17Rik - RIKEN cDNA 1700110K17 gene ncRNA common_peak2_256_2260_0.0668563724051463_11.1761734629541_0.848358291678048 chr7 58821844 58826170 + 0.848358291678048 NA intron (NM_009728, intron 16 of 20) intron (NM_009728, intron 16 of 20) 165805 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_142_1079_0.0953747495315955_10.1245029718166_0.848133885623419 chr10 95562624 95564300 + 0.848133885623419 NA intron (NM_027722, intron 1 of 4) CpG 705 NM_027722 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak2_133_993_0.100053969773793_10.0071290264492_0.848124770605525 chr2 37442515 37444106 + 0.848124770605525 NA promoter-TSS (NM_199025) promoter-TSS (NM_199025) 25 NM_146121 227800 Mm.383192 NM_146121 ENSMUSG00000035437 Rabgap1 Gapcena|mKIAA4104 RAB GTPase activating protein 1 protein-coding common_peak2_241_2096_0.0690680097252123_11.0686451509592_0.847793035599591 chr11 78244832 78247621 + 0.847793035599591 NA promoter-TSS (NM_009297) promoter-TSS (NM_009297) 480 NM_009143 20316 Mm.20755 NM_009143 ENSMUSG00000002064 Sdf2 AI853825 stromal cell derived factor 2 protein-coding common_peak2_110_782_0.111049670073655_9.66839333232787_0.84750685985959 chr3 142549171 142551427 + 0.84750685985959 NA TTS (NM_001083312) TTS (NM_001083312) -9753 NM_018734 55932 Mm.439718 NM_018734 ENSMUSG00000028268 Gbp3 AW228655|GBP-3|GBP-4|Gbp4 guanylate binding protein 3 protein-coding common_peak2_110_782_0.111049670073655_9.66839333232787_0.84750685985959-2 chr4 3574044 3575560 + 0.84750685985959 NA promoter-TSS (NM_054089) promoter-TSS (NM_054089) -34 NM_028097 72098 Mm.441135 NM_028097 ENSMUSG00000028232 Tmem68 2010300G19Rik|AA408325|AW123402 transmembrane protein 68 protein-coding common_peak2_196_1803_-0.0778770066300805_10.7780451199403_0.847425831759525 chr8 122566585 122568881 + 0.847425831759525 NA promoter-TSS (NM_026014) promoter-TSS (NM_026014) -282 NM_026014 67177 Mm.21873 NM_026014 ENSMUSG00000006585 Cdt1 2610318F11Rik|AW545653|C76791|Ris2 chromatin licensing and DNA replication factor 1 protein-coding unique_peak2_29_142_0.248785095819314_7.28426388468805_0.847416845772596 chr13 33011889 33013128 + 0.847416845772596 NA intron (NM_009256, intron 5 of 6) Lx|LINE|L1 7967 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding common_peak2_29_142_0.248785095819314_7.28426388468805_0.847416845772596 chr9 63747018 63747905 + 0.847416845772596 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 10533 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_29_142_0.248785095819314_7.28426388468805_0.847416845772596 chr10 81140616 81141260 + 0.847416845772596 NA intron (NM_010731, intron 1 of 2) intron (NM_010731, intron 1 of 2) 4667 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak1_29_142_0.248785095819314_7.28426388468805_0.847416845772596-2 chr11 100588799 100589347 + 0.847416845772596 NA intron (NM_019795, intron 9 of 13) B1F|SINE|Alu 13182 NM_001146318 12799 Mm.15711 NM_009923 ENSMUSG00000006782 Cnp CNPase|Cnp-1|Cnp1 2',3'-cyclic nucleotide 3' phosphodiesterase protein-coding common_peak2_90_722_-0.12550679423107_9.43509843983558_0.846963808274659 chr3 14610507 14612028 + 0.846963808274659 NA promoter-TSS (NM_001099674) promoter-TSS (NM_001099674) -11 NM_001099674 69126 Mm.389020 NM_001099674 ENSMUSG00000078784 1810022K09Rik AI746582|AL023036 RIKEN cDNA 1810022K09 gene protein-coding common_peak1_36_188_0.217541226990337_7.67101303771624_0.846587128354597 chr3 152151847 152152751 + 0.846587128354597 NA intron (NM_016867, intron 1 of 5) B4|SINE|B4 13601 NM_016867 54120 Mm.97 NM_016867 ENSMUSG00000039131 Gipc2 2200002N01Rik|AU021850|Semcap2 GIPC PDZ domain containing family, member 2 protein-coding unique_peak2_36_188_0.217541226990337_7.67101303771624_0.846587128354597 chr6 85965894 85967178 + 0.846587128354597 NA Intergenic RMER1A|Other|Other -4869 NM_028099 72102 Mm.24007 NM_028099 ENSMUSG00000030002 Dusp11 2010300F21Rik|AI481497 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) protein-coding common_peak2_321_2999_0.0578624391620952_11.5796780049643_0.846453764515235 chr4 141536250 141540046 + 0.846453764515235 NA intron (NM_019763, intron 1 of 15) CpG 449 NM_019763 56381 Mm.299906 NM_019763 ENSMUSG00000040761 Spen Mint|mKIAA0929 SPEN homolog, transcriptional regulator (Drosophila) protein-coding common_peak2_57_426_-0.162816633921565_8.65668394265971_0.84619892595523 chr7 19876083 19877642 + 0.84619892595523 NA 3' UTR (NM_177036, exon 7 of 7) 3' UTR (NM_177036, exon 7 of 7) 11103 NM_177036 319930 Mm.215839 NM_177036 ENSMUSG00000049848 Ceacam19 C130022P09Rik|CEAL1 carcinoembryonic antigen-related cell adhesion molecule 19 protein-coding common_peak1_57_426_-0.162816633921565_8.65668394265971_0.84619892595523 chr4 119875113 119876389 + 0.84619892595523 NA intron (NM_010657, intron 1 of 8) intron (NM_010657, intron 1 of 8) 61073 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak2_57_426_-0.162816633921565_8.65668394265971_0.84619892595523-2 chr8 3630478 3631987 + 0.84619892595523 NA promoter-TSS (NM_011503) promoter-TSS (NM_011503) 72 NM_011503 20911 Mm.7247 NM_011503 ENSMUSG00000004626 Stxbp2 C79054|Munc-18-2|Munc-18b|Munc18b|Sxtbp2|Sxtp2|Unc18-2|Unc18b|muSec1 syntaxin binding protein 2 protein-coding common_peak1_58_347_0.162582909193096_8.52423495044528_0.846122740665142 chr9 45054899 45055646 + 0.846122740665142 NA promoter-TSS (NM_001093749) promoter-TSS (NM_001093749) 91 NM_001093749 319742 Mm.49611 NM_176993 ENSMUSG00000070305 Mpzl3 5430427F17Rik|A530065I17Rik|rc myelin protein zero-like 3 protein-coding common_peak1_19_127_-0.308865772369224_6.84556711381539_0.845833420372485 chr3 142547024 142547653 + 0.845833420372485 NA 3' UTR (NM_001083312, exon 11 of 11) 3' UTR (NM_001083312, exon 11 of 11) -12714 NM_018734 55932 Mm.439718 NM_018734 ENSMUSG00000028268 Gbp3 AW228655|GBP-3|GBP-4|Gbp4 guanylate binding protein 3 protein-coding common_peak1_238_2063_0.0698772586693241_11.0461658847579_0.845826139635668 chr12 31498501 31500336 + 0.845826139635668 NA intron (NM_134048, intron 1 of 5) CpG 198 NM_134048 104836 Mm.273270 NM_134048 ENSMUSG00000020659 Cbll1 AI467391|Hakai|c-Cbl-like Casitas B-lineage lymphoma-like 1 protein-coding common_peak2_255_2467_-0.0664241712788254_11.23591459351_0.845745866492486 chr11 96976444 96979412 + 0.845745866492486 NA promoter-TSS (NM_001080964) promoter-TSS (NM_001080964) -240 NM_001080964 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak1_155_1205_0.0901538800804893_10.2810911319403_0.845603545103111 chr7 31155269 31157118 + 0.845603545103111 NA Intergenic Intergenic -5143 NM_027898 52857 Mm.27366 NM_027898 ENSMUSG00000001248 Gramd1a 1300003M23Rik|AI415002|AW547240|D7Bwg0611e GRAM domain containing 1A protein-coding common_peak1_37_262_-0.211942474709056_7.93294775193777_0.845473672512686 chr1 40499320 40500053 + 0.845473672512686 NA 3' UTR (NM_008365, exon 11 of 11) 3' UTR (NM_008365, exon 11 of 11) -15676 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_135_1160_-0.0977790623323251_10.1322627256994_0.84520840793912 chr11 67523619 67525424 + 0.84520840793912 NA Intergenic CT-rich|Low_complexity|Low_complexity -8477 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_38_201_0.214731966856066_7.76557746617983_0.845169509720215 chr17 5439724 5440699 + 0.845169509720215 NA promoter-TSS (NM_027457) promoter-TSS (NM_027457) 49 NM_027457 70544 Mm.46654 NM_027457 ENSMUSG00000004945 Tmem242 1110008A10Rik|2310046K16Rik|5730437N04Rik transmembrane protein 242 protein-coding common_peak2_38_201_0.214731966856066_7.76557746617983_0.845169509720215 chr11 78550173 78550904 + 0.845169509720215 NA exon (NM_133706, exon 1 of 3) exon (NM_133706, exon 1 of 3) 197 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e transmembrane protein 97 protein-coding common_peak1_38_201_0.214731966856066_7.76557746617983_0.845169509720215-2 chr8 117801337 117801960 + 0.845169509720215 NA intron (NM_026758, intron 1 of 4) intron (NM_026758, intron 1 of 4) 281 NM_026758 68533 Mm.181836 NM_026758 ENSMUSG00000031843 Mphosph6 1110001M01Rik|AA536809|C86426 M phase phosphoprotein 6 protein-coding common_peak2_38_201_0.214731966856066_7.76557746617983_0.845169509720215-2 chr8 90828806 90829642 + 0.845169509720215 NA intron (NM_177224, intron 1 of 39) intron (NM_177224, intron 1 of 39) 389 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_105_737_0.114877070569072_9.58491554134493_0.844611251261474 chr5 92434185 92436083 + 0.844611251261474 NA promoter-TSS (NM_183392) promoter-TSS (NM_183392) 65 NM_183392 269113 Mm.275289 NM_183392 ENSMUSG00000034826 Nup54 3110079L04Rik|54kDa nucleoporin 54 protein-coding common_peak1_220_1870_0.0729473328082211_10.9060675096449_0.844466363774208 chr5 33935433 33937219 + 0.844466363774208 NA promoter-TSS (NM_011914) promoter-TSS (NM_011914) -68 NM_011914 24116 Mm.332320 NM_011914 ENSMUSG00000029111 Nelfa Whsc2|Whsc2h negative elongation factor complex member A, Whsc2 protein-coding common_peak1_101_825_-0.115714883105634_9.63214052986663_0.844246068921752 chr19 21036025 21037482 + 0.844246068921752 NA Intergenic Intergenic -67957 NR_126458 75354 Mm.243873 NR_126458 4930554I06Rik - RIKEN cDNA 4930554I06 gene ncRNA common_peak1_93_750_-0.122925698901897_9.49120624806332_0.844055287118101 chr4 12140004 12141219 + 0.844055287118101 NA intron (NM_028226, intron 1 of 2) CpG 494 NM_028226 72397 Mm.430709 NM_028226 ENSMUSG00000046667 Rbm12b1 3000004N20Rik|Rbm12b|Rbm12ba RNA binding motif protein 12 B1 protein-coding common_peak1_25_171_-0.270843510061166_7.29084299967151_0.84392737372674 chr4 72200492 72200998 + 0.84392737372674 NA promoter-TSS (NR_027923) promoter-TSS (NR_027923) 148 NM_011599 21885 Mm.278444 NM_011599 ENSMUSG00000008305 Tle1 C230057C06Rik|Estm14|Grg-1|Grg1|Tle4l transducin-like enhancer of split 1 protein-coding common_peak2_122_891_0.104677881298405_9.85323884056951_0.843903001975425 chr3 98012819 98014501 + 0.843903001975425 NA 5' UTR (NM_010928, exon 1 of 34) 5' UTR (NM_010928, exon 1 of 34) 122 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak1_30_208_-0.240676927346576_7.58702066840759_0.843639283817973-2 chr9 63698774 63699387 + 0.843639283817973 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 58914 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_30_208_-0.240676927346576_7.58702066840759_0.843639283817973 chr12 81532256 81533143 + 0.843639283817973 NA intron (NM_001309814, intron 1 of 2) CpG 212 NM_001309847 105940408 NM_001309847 ENSMUSG00000021139 Synj2bp-cox16 ARIP2a Synj2bp-cox16 readthrough protein-coding common_peak1_30_208_-0.240676927346576_7.58702066840759_0.843639283817973 chr17 84335273 84335885 + 0.843639283817973 NA intron (NM_183021, intron 27 of 37) B1_Mus2|SINE|Alu 130629 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak1_53_392_-0.169565624232655_8.53360269014228_0.843176950765018 chr11 120098951 120099829 + 0.843176950765018 NA promoter-TSS (NM_183137) promoter-TSS (NM_183137) 456 NM_001110242 208501 Mm.46699 NM_001110242 ENSMUSG00000078572 Ndufaf8 1810043H04Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 8 protein-coding common_peak2_131_975_0.0998072324707042_9.98064095379824_0.842773943907465 chr4 59221993 59225829 + 0.842773943907465 NA Intergenic Intergenic 34361 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak1_131_975_0.0998072324707042_9.98064095379824_0.842773943907465 chr9 51008058 51009120 + 0.842773943907465 NA intron (NM_178710, intron 1 of 15) CpG 484 NM_178710 235344 Mm.104932 NM_178710 ENSMUSG00000037112 Sik2 G630080D20Rik|Snf1lk2 salt inducible kinase 2 protein-coding unique_peak2_72_457_0.143115238288685_8.91076140724129_0.842666272010825 chr7 72279500 72281945 + 0.842666272010825 NA intron (NM_001024703, intron 1 of 22) intron (NM_001024703, intron 1 of 22) 25873 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak2_52_301_0.177337026118034_8.3270732523841_0.842557601924796 chr4 151005362 151006942 + 0.842557601924796 NA intron (NM_011067, intron 20 of 20) MTD|LTR|ERVL-MaLR 9055 NM_011910 24111 Mm.89984 NM_011910 ENSMUSG00000028963 Uts2 UII|Ucn2|prepro-UII urotensin 2 protein-coding common_peak2_83_657_-0.13124450756403_9.29632151995323_0.842523499937808 chr9 21524913 21526844 + 0.842523499937808 NA promoter-TSS (NM_001198794) promoter-TSS (NM_001198794) -299 NM_206536 382062 Mm.325205 NM_206536 ENSMUSG00000057191 AB124611 Gm1706 cDNA sequence AB124611 protein-coding common_peak2_40_215_0.206555762901957_7.85816538361445_0.842511314979987 chr2 156361725 156363442 + 0.842511314979987 NA intron (NM_027585, intron 9 of 12) RLTR4_MM-int|LTR|ERV1 30396 NR_024329 347740 Mm.324242 NR_024329 2900097C17Rik 1810005K14Rik|4930563C06Rik RIKEN cDNA 2900097C17 gene ncRNA common_peak1_104_854_-0.114200379096442_9.68268042022504_0.842185647680567 chr1 92803670 92805223 + 0.842185647680567 NA Intergenic Intergenic -27240 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_148_1292_-0.091581557702634_10.2907157809589_0.842124073425645 chr6 125095185 125098370 + 0.842124073425645 NA promoter-TSS (NR_106012) promoter-TSS (NR_106012) -247 NR_106012 102466272 NR_106012 ENSMUSG00000098762 Mir7045 Gm27758|mmu-mir-7045 microRNA 7045 ncRNA common_peak1_92_624_0.123104341338141_9.34926455021852_0.841823776637576 chr5 5379504 5381175 + 0.841823776637576 NA promoter-TSS (NM_011074) promoter-TSS (NM_011074) -88 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding common_peak2_64_487_-0.15382281722999_8.85382592894789_0.84156081085756 chr4 133338187 133339967 + 0.84156081085756 NA 5' UTR (NM_199306, exon 1 of 16) 5' UTR (NM_199306, exon 1 of 16) 238 NM_199306 230796 Mm.226576 NM_199306 ENSMUSG00000037622 Wdtc1 Gm695|adipose|adp WD and tetratricopeptide repeats 1 protein-coding common_peak2_22_149_-0.29035788640237_7.0836397472947_0.841529619439539 chr18 80525364 80526300 + 0.841529619439539 NA Intergenic Intergenic 18714 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_26_123_0.26801125645272_7.08820193861323_0.841529619439539 chr13 49190906 49191837 + 0.841529619439539 NA intron (NM_013610, intron 1 of 3) intron (NM_013610, intron 1 of 3) 3824 NM_013610 18081 Mm.18503 NM_013610 ENSMUSG00000037966 Ninj1 AU024536 ninjurin 1 protein-coding unique_peak2_26_123_0.26801125645272_7.08820193861323_0.841529619439539 chr12 72489760 72490986 + 0.841529619439539 NA intron (NM_030070, intron 23 of 24) RLTR19|LTR|ERVK -45984 NM_026327 67708 Mm.11233 NM_026327 ENSMUSG00000034501 Pcnx4 1810048J11Rik|4932413O10|AU017192|Pcnxl4 pecanex homolog 4 protein-coding common_peak1_22_149_-0.29035788640237_7.0836397472947_0.841529619439539-2 chr6 114881215 114881739 + 0.841529619439539 NA intron (NM_177683, intron 2 of 4) intron (NM_177683, intron 2 of 4) 40275 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_26_123_0.26801125645272_7.08820193861323_0.841529619439539-2 chr5 34272491 34273138 + 0.841529619439539 NA intron (NM_001015039, intron 1 of 12) intron (NM_001015039, intron 1 of 12) 15510 NM_001015039 231125 Mm.113388 NM_001015039 ENSMUSG00000037224 Zfyve28 9630058O20Rik|Gm146|mKIAA1643 zinc finger, FYVE domain containing 28 protein-coding common_peak1_26_123_0.26801125645272_7.08820193861323_0.841529619439539 chr4 135104323 135104841 + 0.841529619439539 NA Intergenic Intergenic -16063 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak1_22_149_-0.29035788640237_7.0836397472947_0.841529619439539 chr12 112829783 112830295 + 0.841529619439539 NA promoter-TSS (NM_028023) promoter-TSS (NM_028023) -650 NM_028023 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding common_peak1_124_1049_-0.102052833538782_9.98514719578409_0.841169703142202 chr1 164959357 164961069 + 0.841169703142202 NA Intergenic Intergenic -24703 NM_008510 16963 Mm.190 NM_008510 ENSMUSG00000026573 Xcl1 AI661682|ATAC|LTN|Lptn|SCM-1|SCM-1a|Scyc1 chemokine (C motif) ligand 1 protein-coding common_peak1_87_581_0.12814702215838_9.24894885398747_0.840959483913772 chr2 30707161 30708657 + 0.840959483913772 NA Intergenic CpG -13301 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_41_294_-0.200484189264349_8.10432904961703_0.84095447650099 chr2 143840294 143840994 + 0.84095447650099 NA intron (NM_001291061, intron 5 of 7) intron (NM_001291061, intron 5 of 7) 22529 NM_009751 12075 Mm.275937 NM_009751 ENSMUSG00000027420 Bfsp1 CP95 beaded filament structural protein 1, in lens-CP94 protein-coding common_peak1_47_342_-0.181676986894361_8.33122627272563_0.840873667806438 chr11 90638098 90638942 + 0.840873667806438 NA promoter-TSS (NM_011505) promoter-TSS (NM_011505) 336 NM_199008 69802 Mm.151940 NM_199008 ENSMUSG00000020544 Cox11 2010004I09Rik cytochrome c oxidase assembly protein 11 protein-coding common_peak2_51_376_-0.176387157441376_8.47022713454798_0.840848934409982 chr15 102376711 102378761 + 0.840848934409982 NA Intergenic Intergenic -11465 NM_130458 170574 Mm.263284 NM_130458 ENSMUSG00000060284 Sp7 6430578P22Rik|C22|Osx Sp7 transcription factor 7 protein-coding common_peak2_63_385_0.1570208482298_8.67096746138298_0.840842098722702 chr17 14992256 14993881 + 0.840842098722702 NA intron (NM_198104, intron 1 of 3) (CCCCG)n|Simple_repeat|Simple_repeat 14204 NM_001123370 100041574 Mm.393767 NM_001123370 ENSMUSG00000036552 9030025P20Rik D17Zt9e RIKEN cDNA 9030025P20 gene protein-coding common_peak2_161_1428_-0.0878358069165817_10.4368722976375_0.840572292199873 chr18 82470920 82474285 + 0.840572292199873 NA Intergenic Intergenic -2521 NM_010777 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_82_539_0.132690272117516_9.14316073310959_0.840543736556954 chr1 34849260 34850251 + 0.840543736556954 NA promoter-TSS (NM_175421) promoter-TSS (NM_175421) -204 NM_175421 226971 Mm.292751 NM_145516 ENSMUSG00000026123 Plekhb2 2310009M15Rik|AU018239|Evt2|Phdc|evt-2 pleckstrin homology domain containing, family B (evectins) member 2 protein-coding unique_peak2_31_155_0.237463355449275_7.40413389658689_0.840393485058706 chr14 51913220 51914177 + 0.840393485058706 NA promoter-TSS (NM_013864) promoter-TSS (NM_013864) -210 NM_013864 29811 Mm.26722 NM_013864 ENSMUSG00000004558 Ndrg2 AI182517|AU040374|Ndr2|SYLD N-myc downstream regulated gene 2 protein-coding common_peak1_153_1186_0.0902296323175165_10.2582190358007_0.840355335018372 chr11 5836986 5838383 + 0.840355335018372 NA exon (NM_017401, exon 1 of 11) exon (NM_017401, exon 1 of 11) 332 NM_017401 54125 Mm.260194 NM_017401 ENSMUSG00000020474 Polm AI462166|B230309I03Rik|Tdt-N polymerase (DNA directed), mu protein-coding common_peak2_48_272_0.184119095990832_8.18481668891527_0.840177391792502 chr1 185331590 185332624 + 0.840177391792502 NA promoter-TSS (NM_011794) promoter-TSS (NM_011794) -52 NM_011794 23827 Mm.227549 NM_011794 ENSMUSG00000026617 Bpnt1 BPntase bisphosphate 3'-nucleotidase 1 protein-coding common_peak1_43_310_-0.194360716250296_8.18359041200545_0.840177391792502 chr3 145690924 145691191 + 0.840177391792502 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -41072 NM_010516 16007 Mm.1231 NM_010516 ENSMUSG00000028195 Cyr61 AI325051|CCN1|Igfbp10 cysteine rich protein 61 protein-coding common_peak1_240_2086_0.0686366100948153_11.0615331902072_0.839962864773884 chr3 145924183 145925367 + 0.839962864773884 NA intron (NM_009740, intron 1 of 2) CpG 513 NM_009740 12042 Mm.239141 NM_009740 ENSMUSG00000028191 Bcl10 AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10 B cell leukemia/lymphoma 10 protein-coding common_peak2_209_1946_-0.0748446268571197_10.8896148552917_0.839465019564627 chr13 64151540 64154240 + 0.839465019564627 NA exon (NM_175494, exon 1 of 5) exon (NM_175494, exon 1 of 5) 309 NM_175494 238673 Mm.300065 NM_175494 ENSMUSG00000044934 Zfp367 8030486J21Rik|ZFF29a|ZFF29b|Znf367 zinc finger protein 367 protein-coding unique_peak1_13_50_0.387527096860075_5.86618889040153_0.839305661805159 chr2 137117105 137117505 + 0.839305661805159 NA promoter-TSS (NM_013822) promoter-TSS (NM_013822) -785 NM_013822 16449 Mm.22398 NM_013822 ENSMUSG00000027276 Jag1 ABE2|Gsfabe2|Htu|Ozz|Ser-1 jagged 1 protein-coding common_peak1_13_50_0.387527096860075_5.86618889040153_0.839305661805159 chr11 90239157 90239571 + 0.839305661805159 NA Intergenic Intergenic -10112 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak1_13_50_0.387527096860075_5.86618889040153_0.839305661805159-2 chr9 14364955 14365343 + 0.839305661805159 NA intron (NM_028013, intron 1 of 1) intron (NM_028013, intron 1 of 1) 16093 NM_028013 71946 Mm.41423 NM_028013 ENSMUSG00000037419 Endod1 2210414F18Rik|2310067E08Rik|C85344 endonuclease domain containing 1 protein-coding unique_peak2_10_67_-0.454277409742743_5.86032413637897_0.839305661805146 chr6 70825356 70825953 + 0.839305661805146 NA Intergenic Intergenic -18861 NM_010121 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding unique_peak2_10_67_-0.454277409742743_5.86032413637897_0.839305661805146-2 chr7 114477169 114477877 + 0.839305661805146 NA intron (NM_011055, intron 1 of 15) intron (NM_011055, intron 1 of 15) 62269 NM_011055 18576 Mm.430730 NM_011055 ENSMUSG00000030671 Pde3b 9830102A01Rik|AI847709 phosphodiesterase 3B, cGMP-inhibited protein-coding common_peak1_70_441_0.145256986455585_8.86053105261922_0.839233874774011 chr15 102243488 102244503 + 0.839233874774011 NA intron (NM_011244, intron 3 of 9) intron (NM_011244, intron 3 of 9) 2505 NM_001042727 19411 Mm.1273 NM_011244 ENSMUSG00000001288 Rarg Nr1b3|RAR-gamma|RARD|RARgamma2 retinoic acid receptor, gamma protein-coding common_peak1_81_638_-0.131616544695213_9.25386384859939_0.839189473290312-2 chr4 132261442 132262268 + 0.839189473290312 NA promoter-TSS (NM_020273) promoter-TSS (NM_020273) -306 NM_001122992 56809 Mm.103489 NM_020273 ENSMUSG00000028901 Gmeb1 1110050A04Rik|AI256615|AI481278 glucocorticoid modulatory element binding protein 1 protein-coding common_peak1_81_638_-0.131616544695213_9.25386384859939_0.839189473290312 chr4 32614456 32615196 + 0.839189473290312 NA promoter-TSS (NM_001122978) promoter-TSS (NM_001122978) -647 NM_001122978 26885 Mm.22279 NM_011997 ENSMUSG00000028282 Casp8ap2 D4Ertd659e|FLASH caspase 8 associated protein 2 protein-coding common_peak1_46_258_0.186322799739463_8.10996968755629_0.838998838418839 chr1 131278453 131279577 + 0.838998838418839 NA intron (NM_019777, intron 1 of 21) intron (NM_019777, intron 1 of 21) 548 NM_019777 56489 Mm.386783 NM_019777 ENSMUSG00000042349 Ikbke AW558201|IKK-i|IKKepsilon|Ikki inhibitor of kappaB kinase epsilon protein-coding common_peak1_120_873_0.105077375134849_9.82402815706802_0.838810447984322 chr8 119558057 119559373 + 0.838810447984322 NA promoter-TSS (NM_001167910) promoter-TSS (NM_001167910) 46 NM_001167910 56453 Mm.206934 NM_019709 ENSMUSG00000031835 Mbtps1 0610038M03Rik|AV003995|S1P|SKI-1|Ski1|mKIAA0091 membrane-bound transcription factor peptidase, site 1 protein-coding common_peak1_435_4680_-0.047634191809605_12.1687839538072_0.838699246216001 chr16 4878302 4881244 + 0.838699246216001 NA promoter-TSS (NM_145359) promoter-TSS (NM_145359) 78 NM_145359 207740 Mm.268895 NM_145359 ENSMUSG00000039568 Ubald1 1500031H01Rik|BC013706|Fam100a UBA-like domain containing 1 protein-coding common_peak1_32_223_-0.230034974396724_7.69233743485924_0.838664580555915 chr18 80682893 80683689 + 0.838664580555915 NA intron (NM_198429, intron 2 of 9) intron (NM_198429, intron 2 of 9) 24882 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_32_223_-0.230034974396724_7.69233743485924_0.838664580555915 chr7 30735466 30737390 + 0.838664580555915 NA intron (NM_001290631, intron 4 of 10) intron (NM_001290631, intron 4 of 10) 2979 NM_008085 14447 Mm.436562 NM_008085 ENSMUSG00000061099 Gapdhs Gapd-s|Gapds glyceraldehyde-3-phosphate dehydrogenase, spermatogenic protein-coding common_peak1_17_71_0.334760360430355_6.33730518165749_0.838566397596604 chr11 95748976 95749383 + 0.838566397596604 NA 5' UTR (NM_201609, exon 1 of 5) 5' UTR (NM_201609, exon 1 of 5) 112 NM_201609 268469 Mm.389038 NM_201609 ENSMUSG00000075595 Zfp652 9530033F24Rik|ZNF652 zinc finger protein 652 protein-coding common_peak1_17_71_0.334760360430355_6.33730518165749_0.838566397596604-7 chr6 128730799 128731190 + 0.838566397596604 NA Intergenic ORR1D1|LTR|ERVL-MaLR -7948 NM_001099918 100043861 Mm.66911 NM_001099918 ENSMUSG00000079299 Klrb1 4930431A04Rik|Gm4696|Klrb1g|Klrb6|Ly-55|Ly55|NKR-P1G|Nkrp-1e|Nkrp1g killer cell lectin-like receptor subfamily B member 1 protein-coding common_peak1_17_71_0.334760360430355_6.33730518165749_0.838566397596604-3 chr12 86046918 86047444 + 0.838566397596604 NA intron (NM_001081423, intron 33 of 33) intron (NM_001081423, intron 33 of 33) 31860 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak1_17_71_0.334760360430355_6.33730518165749_0.838566397596604-5 chr5 105516709 105517247 + 0.838566397596604 NA Intergenic Intergenic -2493 NM_133897 100604 Mm.319847 NM_133897 ENSMUSG00000054720 Lrrc8c AD158|AI326115|E430036I04Rik|fad158 leucine rich repeat containing 8 family, member C protein-coding common_peak1_17_71_0.334760360430355_6.33730518165749_0.838566397596604-6 chr6 30509833 30510332 + 0.838566397596604 NA promoter-TSS (NM_178625) promoter-TSS (NM_178625) 233 NM_027073 75647 Mm.46117 NM_027073 ENSMUSG00000029784 Ssmem1 1700016K02Rik|1700025E21Rik serine-rich single-pass membrane protein 1 protein-coding unique_peak2_17_71_0.334760360430355_6.33730518165749_0.838566397596604 chr17 3394529 3395130 + 0.838566397596604 NA intron (NM_001122998, intron 1 of 26) B4A|SINE|B4 -2378 NM_011878 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding unique_peak2_17_71_0.334760360430355_6.33730518165749_0.838566397596604-2 chr6 122653449 122654193 + 0.838566397596604 NA Intergenic Intergenic 27397 NM_139218 73708 Mm.27982 NM_139218 ENSMUSG00000046323 Dppa3 2410075G02Rik|PCG7|PGC7|Stella developmental pluripotency-associated 3 protein-coding common_peak1_17_71_0.334760360430355_6.33730518165749_0.838566397596604-2 chr12 25367349 25367806 + 0.838566397596604 NA Intergenic Intergenic 238403 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_17_71_0.334760360430355_6.33730518165749_0.838566397596604-4 chr17 83983944 83984345 + 0.838566397596604 NA Intergenic Intergenic -14408 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak2_61_370_0.15801913929986_8.61428494627073_0.83753258046568-2 chr16 16993929 16995648 + 0.83753258046568 NA intron (NM_011949, intron 1 of 8) ORR1B1|LTR|ERVL-MaLR 11406 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak2_61_370_0.15801913929986_8.61428494627073_0.83753258046568 chr12 102665118 102667102 + 0.83753258046568 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 18910 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak2_102_835_-0.115811248304144_9.64945350792881_0.83748195698332 chr11 21369809 21371775 + 0.83748195698332 NA promoter-TSS (NM_139297) promoter-TSS (NM_139297) -163 NM_139297 216558 Mm.28877 NM_139297 ENSMUSG00000001891 Ugp2 UDPGP|UGPase UDP-glucose pyrophosphorylase 2 protein-coding common_peak2_90_607_0.124417529276462_9.31013627808182_0.837403689900677 chrX 56454787 56456399 + 0.837403689900677 NA intron (NM_172779, intron 2 of 16) CpG-15696 754 NM_172779 236790 Mm.474772 NM_172779 ENSMUSG00000035967 Ints6l 4930535D10Rik|6330505F04Rik|D130066O12|Ddx26b integrator complex subunit 6 like protein-coding common_peak1_15_100_-0.361958219626627_6.47723237293848_0.837246886060628 chr1 155042912 155043287 + 0.837246886060628 NA Intergenic MER77B|LTR|ERVL 56537 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding unique_peak2_27_185_-0.252594061090106_7.41286178056298_0.837222378493321-3 chr6 72410224 72411368 + 0.837222378493321 NA Intergenic Intergenic -3512 NM_019802 56316 Mm.19937 NM_019802 ENSMUSG00000053460 Ggcx - gamma-glutamyl carboxylase protein-coding unique_peak2_27_185_-0.252594061090106_7.41286178056298_0.837222378493321 chr12 101019945 101021293 + 0.837222378493321 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 1149 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak1_27_185_-0.252594061090106_7.41286178056298_0.837222378493321 chr10 42268773 42269301 + 0.837222378493321 NA intron (NM_019740, intron 2 of 3) intron (NM_019740, intron 2 of 3) 7705 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding common_peak1_27_185_-0.252594061090106_7.41286178056298_0.837222378493321-2 chr8 111029717 111030264 + 0.837222378493321 NA intron (NM_001190786, intron 1 of 11) RLTR31_Mm|LTR|ERVK 1761 NM_001190786 234733 Mm.482176 NM_172284 ENSMUSG00000033658 Ddx19b 2810457M08Rik|4921519L13Rik|AW260119 DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b protein-coding unique_peak2_27_185_-0.252594061090106_7.41286178056298_0.837222378493321-2 chr16 24135976 24137134 + 0.837222378493321 NA Intergenic Intergenic -147943 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_23_105_0.285855013528896_6.87084796132765_0.836487378008713-2 chr11 5738059 5738586 + 0.836487378008713 NA intron (NM_001077661, intron 1 of 5) RSINE1|SINE|B4 2854 NM_178623 72046 Mm.271657 NM_178623 ENSMUSG00000049680 Urgcp 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 upregulator of cell proliferation protein-coding common_peak1_23_105_0.285855013528896_6.87084796132765_0.836487378008713 chr10 39505001 39505508 + 0.836487378008713 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) -107680 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak1_23_105_0.285855013528896_6.87084796132765_0.836487378008713-3 chr7 27481814 27482342 + 0.836487378008713 NA Intergenic Intergenic -4875 NM_018820 55942 Mm.153684 NM_018820 ENSMUSG00000008384 Sertad1 1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1 SERTA domain containing 1 protein-coding common_peak2_74_575_-0.139775293152645_9.10003735486599_0.835989763585181 chr6 72548974 72551354 + 0.835989763585181 NA intron (NM_001271395, intron 1 of 9) intron (NM_001271395, intron 1 of 9) 517 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_89_712_-0.124967317692901_9.41527460759744_0.835951640203179 chr18 67799439 67801081 + 0.835951640203179 NA promoter-TSS (NR_045376) promoter-TSS (NR_045376) 153 NM_027556 70799 Mm.30857 NM_027556 ENSMUSG00000024542 Cep192 4631422C13Rik|D430014P18Rik centrosomal protein 192 protein-coding common_peak2_498_5183_0.0439525995248147_12.361826302647_0.835740082480078 chr6 87498224 87505559 + 0.835740082480078 NA intron (NM_001037727, intron 1 of 10) intron (NM_001037727, intron 1 of 10) -5564 NM_175476 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak2_33_168_0.229269135878343_7.51551400422136_0.835598156055015 chr7 49758847 49759689 + 0.835598156055015 NA promoter-TSS (NM_001146052) promoter-TSS (NM_001146052) 162 NM_001146049 53415 Mm.20801 NM_016865 ENSMUSG00000039745 Htatip2 AW111545|Cc3|Tip30 HIV-1 Tat interactive protein 2 protein-coding common_peak2_34_238_-0.219421093457215_7.79115626125214_0.835324653867476 chr6 90369352 90370417 + 0.835324653867476 NA exon (NM_030260, exon 1 of 6) exon (NM_030260, exon 1 of 6) 390 NM_030260 80292 Mm.100116 NM_030260 ENSMUSG00000034430 Zxdc A930012H20|B930086F11Rik|BC003332 ZXD family zinc finger C protein-coding common_peak1_34_238_-0.219421093457215_7.79115626125214_0.835324653867476 chr7 118705432 118706011 + 0.835324653867476 NA promoter-TSS (NM_019580) promoter-TSS (NM_019580) 17 NM_019580 56209 Mm.273142 NM_019580 ENSMUSG00000033917 Gde1 1200003M13Rik|Mir16|RGS16 glycerophosphodiester phosphodiesterase 1 protein-coding common_peak1_184_1495_0.0809947782020934_10.5873918489887_0.835253761415695 chr5 124540103 124541769 + 0.835253761415695 NA exon (NM_019770, exon 1 of 4) exon (NM_019770, exon 1 of 4) 145 NM_019770 56334 Mm.325307 NM_019770 ENSMUSG00000029390 Tmed2 1110032D12Rik|1810020N21Rik|Rnp24|Sid394|p24beta1 transmembrane p24 trafficking protein 2 protein-coding common_peak2_97_787_-0.118563271359335_9.56277018377671_0.835216331038008 chr2 30827085 30828565 + 0.835216331038008 NA intron (NM_133346, intron 1 of 5) CpG 475 NM_133346 72323 Mm.27656 NM_133346 ENSMUSG00000039483 Asb6 2510004M11Rik|AA409356 ankyrin repeat and SOCS box-containing 6 protein-coding common_peak2_101_702_0.116902209241278_9.51583198369317_0.835148202077389 chr6 125038684 125040634 + 0.835148202077389 NA promoter-TSS (NM_133345) promoter-TSS (NM_133345) -189 NM_133345 28019 Mm.262547 NM_133345 ENSMUSG00000030330 Ing4 D6Wsu147e|D6Xrf92|p29ING4 inhibitor of growth family, member 4 protein-coding common_peak1_148_1137_0.0926401598010393_10.1986049222071_0.834843268546267 chr4 139129736 139131337 + 0.834843268546267 NA intron (NM_001163006, intron 1 of 3) CpG 501 NR_033745 433771 Mm.305990 NM_001163006 ENSMUSG00000050608 Minos1 2310028O11Rik mitochondrial inner membrane organizing system 1 protein-coding common_peak1_355_3665_-0.0537480794029843_11.8131170308384_0.834771305027319 chr6 86848525 86851409 + 0.834771305027319 NA promoter-TSS (NR_028298) promoter-TSS (NR_028298) 450 NM_001040106 269774 Mm.221038 NM_177762 ENSMUSG00000057230 Aak1 5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048 AP2 associated kinase 1 protein-coding common_peak2_58_435_-0.162657919735102_8.68685536490938_0.834292380362479 chr11 104361982 104363768 + 0.834292380362479 NA intron (NM_001081045, intron 4 of 13) intron (NM_001081045, intron 4 of 13) 79416 NM_001081045 76719 Mm.136418 NM_001081045 ENSMUSG00000018412 Kansl1 1700081L11Rik|9430041J06Rik|mKIAA1267 KAT8 regulatory NSL complex subunit 1 protein-coding common_peak1_58_435_-0.162657919735102_8.68685536490938_0.834292380362479 chr12 83950472 83951523 + 0.834292380362479 NA exon (NM_023633, exon 1 of 1) exon (NM_023633, exon 1 of 1) 389 NM_023633 71952 Mm.251483 NM_023633 ENSMUSG00000046791 2410016O06Rik MAPJD|NO66 RIKEN cDNA 2410016O06 gene protein-coding common_peak1_153_1344_-0.0900566054845644_10.3483621547017_0.833990260092184 chr1 133799931 133801871 + 0.833990260092184 NA Intergenic Intergenic -47154 NM_213616 381290 Mm.188617 NM_213616 ENSMUSG00000026463 Atp2b4 Pmca4 ATPase, Ca++ transporting, plasma membrane 4 protein-coding common_peak2_166_1480_-0.0856093196008878_10.4895512654884_0.833856438270805 chr2 154612279 154614667 + 0.833856438270805 NA intron (NM_199304, intron 1 of 14) CpG 105 NM_199304 228807 Mm.103555 NM_199304 ENSMUSG00000059842 Zfp341 Znf341 zinc finger protein 341 protein-coding common_peak2_56_417_-0.16286041253071_8.62592892581553_0.833453639457908 chr1 43557608 43560209 + 0.833453639457908 NA intron (NM_010879, intron 4 of 4) intron (NM_010879, intron 4 of 4) 113157 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_171_1364_0.0842665568194487_10.4568185142169_0.833276450954298 chr8 61487397 61488579 + 0.833276450954298 NA exon (NM_145595, exon 1 of 5) exon (NM_145595, exon 1 of 5) 254 NM_145595 234309 Mm.29059 NM_145595 ENSMUSG00000031641 Cbr4 A730083J17Rik|BC009118 carbonyl reductase 4 protein-coding common_peak1_92_740_-0.122513011418244_9.47207322659671_0.83312491277611 chrX 162901474 162902599 + 0.83312491277611 NA promoter-TSS (NR_033143) promoter-TSS (NR_033143) -135 NR_033143 55936 Mm.2065 NM_018737 ENSMUSG00000031360 Ctps2 A830031M15Rik|AI326475|Ctpsh cytidine 5'-triphosphate synthase 2 protein-coding common_peak1_88_590_0.126004048586656_9.27001634447086_0.833084818623128 chr16 52086164 52087617 + 0.833084818623128 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 55341 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding unique_peak2_88_590_0.126004048586656_9.27001634447086_0.833084818623128 chr4 101191740 101195794 + 0.833084818623128 NA intron (NM_146145, intron 2 of 24) intron (NM_146145, intron 2 of 24) 71515 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_441_4457_0.0469725859756078_12.1456671942476_0.832984435916073 chr2 11168566 11175119 + 0.832984435916073 NA promoter-TSS (NM_008859) promoter-TSS (NM_008859) -540 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak2_20_88_0.3017412128321_6.62660403738245_0.832931981968743 chr7 4526586 4527200 + 0.832931981968743 NA exon (NM_001033548, exon 8 of 12) exon (NM_001033548, exon 8 of 12) -4450 NM_009406 21954 Mm.27674 NM_009406 ENSMUSG00000035458 Tnni3 Tn1|cTnI troponin I, cardiac 3 protein-coding unique_peak1_20_88_0.3017412128321_6.62660403738245_0.832931981968743 chr15 6579186 6579691 + 0.832931981968743 NA promoter-TSS (NM_011815) promoter-TSS (NM_011815) -409 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak2_133_994_0.0986032959050682_10.0078543633835_0.832771752320184 chr4 84021225 84023500 + 0.832771752320184 NA Intergenic Intergenic 22517 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak2_35_181_0.223503032860327_7.61954615662886_0.832570562283602-2 chr7 12818192 12819070 + 0.832570562283602 NA intron (NM_026046, intron 1 of 1) CpG 229 NM_026046 67230 Mm.333574 NM_026046 ENSMUSG00000057894 Zfp329 2810439M05Rik|4632409L22Rik|ZNF329 zinc finger protein 329 protein-coding common_peak2_35_181_0.223503032860327_7.61954615662886_0.832570562283602 chr2 22798498 22799805 + 0.832570562283602 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 24824 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak2_65_495_-0.150264051539638_8.87906428461705_0.832371792335771 chr17 33823729 33825453 + 0.832371792335771 NA promoter-TSS (NM_016844) promoter-TSS (NM_016844) 19 NR_103516 66416 Mm.29513 NM_023202 ENSMUSG00000041881 Ndufa7 14.5kDa|2400007M02Rik|CI-B14.5a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a) protein-coding common_peak1_160_1416_-0.0866271295590391_10.4253104781385_0.832053447727579 chr11 5954817 5956428 + 0.832053447727579 NA promoter-TSS (NM_019661) promoter-TSS (NM_019661) -136 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding common_peak2_305_3055_-0.0590112235686515_11.5479232162514_0.831914797771997 chr12 118299478 118302954 + 0.831914797771997 NA intron (NM_009239, intron 1 of 5) CpG 224 NM_009239 20688 Mm.34699 NM_009239 ENSMUSG00000025323 Sp4 5730497N03Rik|HF-1b|HF1-b trans-acting transcription factor 4 protein-coding common_peak1_117_980_-0.105970609991058_9.88512402122371_0.831846657632413 chr17 24849579 24850839 + 0.831846657632413 NA promoter-TSS (NM_023480) promoter-TSS (NM_023480) 93 NM_023480 68636 Mm.347964 NM_023480 ENSMUSG00000045316 Fahd1 1110025H10Rik|AV002085 fumarylacetoacetate hydrolase domain containing 1 protein-coding common_peak2_155_1206_0.0889581112255513_10.2816890163678_0.831688615338117 chr9 5297867 5300474 + 0.831688615338117 NA intron (NM_009807, intron 1 of 9) intron (NM_009807, intron 1 of 9) 653 NM_009807 12362 Mm.1051 NM_009807 ENSMUSG00000025888 Casp1 ICE|Il1bc caspase 1 protein-coding common_peak1_107_756_0.111282699226575_9.61979083959902_0.831481064550735 chr15 89211060 89212220 + 0.831481064550735 NA promoter-TSS (NM_027805) promoter-TSS (NM_027805) 81 NM_027805 71474 Mm.184055 NM_026813 ENSMUSG00000036561 Ppp6r2 1110033O10Rik|8430411H09Rik|B230107H12Rik|Pp6r2|Saps2 protein phosphatase 6, regulatory subunit 2 protein-coding unique_peak2_18_120_-0.318499033877704_6.75961372033574_0.831384559157665 chr10 21976550 21977307 + 0.831384559157665 NA intron (NM_001161845, intron 3 of 13) intron (NM_001161845, intron 3 of 13) -1744 NM_001161847 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_18_120_-0.318499033877704_6.75961372033574_0.831384559157665 chr11 107467361 107467788 + 0.831384559157665 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 3146 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding unique_peak2_18_120_-0.318499033877704_6.75961372033574_0.831384559157665-2 chr4 118359540 118360491 + 0.831384559157665 NA promoter-TSS (NM_026601) promoter-TSS (NM_026601) 16 NR_003946 68180 Mm.193212 NM_026601 ENSMUSG00000006395 Hyi 2700033B16Rik|6430559E15Rik|HT036 hydroxypyruvate isomerase (putative) protein-coding common_peak1_18_120_-0.318499033877704_6.75961372033574_0.831384559157665-2 chr9 108630880 108631336 + 0.831384559157665 NA intron (NM_011790, intron 3 of 15) MTC|LTR|ERVL-MaLR 18272 NM_011790 23807 Mm.290447 NM_011790 ENSMUSG00000064145 Arih2 AI843547|ARI2|TRIAD1|UIP48 ariadne RBR E3 ubiquitin protein ligase 2 protein-coding common_peak2_28_136_0.250631231552042_7.22334769873655_0.83118444638451-2 chr6 145139773 145140641 + 0.83118444638451 NA intron (NM_001281980, intron 3 of 18) MIRb|SINE|MIR 18468 NM_008511 16970 Mm.843 NM_008511 ENSMUSG00000030263 Lrmp D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1 lymphoid-restricted membrane protein protein-coding common_peak1_24_163_-0.2715368124817_7.22178359837723_0.83118444638451 chr11 87689860 87690362 + 0.83118444638451 NA intron (NM_172448, intron 2 of 9) intron (NM_172448, intron 2 of 9) -9413 NR_045139 68690 Mm.342009 NR_045139 1110028F11Rik - RIKEN cDNA 1110028F11 gene ncRNA common_peak1_24_163_-0.2715368124817_7.22178359837723_0.83118444638451-2 chr17 50728986 50729469 + 0.83118444638451 NA Intergenic ORR1B1|LTR|ERVL-MaLR 30546 NM_001297747 12228 Mm.392910 NM_009770 ENSMUSG00000022863 Btg3 ANA|tob5 B cell translocation gene 3 protein-coding common_peak2_28_136_0.250631231552042_7.22334769873655_0.83118444638451 chr10 44429121 44430188 + 0.83118444638451 NA Intergenic Intergenic 29094 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding common_peak2_55_324_0.168881153288465_8.42873648456005_0.831131947348314 chr11 43394912 43396460 + 0.831131947348314 NA Intergenic Intergenic -21225 NR_029558 387164 NR_029558 ENSMUSG00000065601 Mir146 Mirn146|miR-146a|mmu-mir-146 microRNA 146 ncRNA common_peak1_281_2769_-0.0617923461708934_11.4047740878511_0.830623861872531 chr1 93823833 93826196 + 0.830623861872531 NA promoter-TSS (NM_001310767) promoter-TSS (NM_001310767) -226 NM_178882 98314 Mm.383401 NM_178882 ENSMUSG00000073609 D2hgdh AA408776|AA408778|AI325464 D-2-hydroxyglutarate dehydrogenase protein-coding common_peak1_223_2101_-0.071145270385184_11.0019743187696_0.83045163059209 chr6 71631774 71633548 + 0.83045163059209 NA promoter-TSS (NM_173001) promoter-TSS (NM_173001) 25 NM_173001 104263 Mm.260479 NM_173001 ENSMUSG00000053470 Kdm3a 1700105C21Rik|C230043E16Rik|JHDM2a|Jmjd1|Jmjd1a|KDM2A|TGSA|Tsga lysine (K)-specific demethylase 3A protein-coding common_peak1_38_269_-0.203872147442971_7.97487952332935_0.830295286136118 chr10 7780203 7780896 + 0.830295286136118 NA intron (NM_145418, intron 1 of 7) CpG 368 NM_145418 215751 Mm.471825 NM_145418 ENSMUSG00000040006 Ginm1 AA589616 glycoprotein integral membrane 1 protein-coding common_peak1_99_685_0.117175048336282_9.48065229034095_0.830144375641833 chr1 86302953 86304252 + 0.830144375641833 NA intron (NM_145222, intron 1 of 1) CpG 381 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak1_71_449_0.144128793028342_8.88584558773121_0.830123168652589 chr2 167804984 167805990 + 0.830123168652589 NA Intergenic Intergenic 114310 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak2_71_449_0.144128793028342_8.88584558773121_0.830123168652589 chr1 106581211 106582781 + 0.830123168652589 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -35365 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_182_1475_0.0811769611398603_10.5680654866303_0.830093184990702 chr19 37206676 37209089 + 0.830093184990702 NA promoter-TSS (NM_198300) promoter-TSS (NM_198300) 337 NM_001164336 69104 Mm.175989 NM_027314 ENSMUSG00000023307 March5 1810015H18Rik|2310008I22Rik|2700055A20Rik|5730499H23Rik|E130202O05Rik|MARCH-V|MITOL|Marchv|Rnf153 membrane-associated ring finger (C3HC4) 5 protein-coding common_peak1_21_141_-0.289949376810731_7.00477243109932_0.829947819895537-2 chrX 50611798 50612322 + 0.829947819895537 NA intron (NR_015505, intron 5 of 19) intron (NR_015505, intron 5 of 19) 23261 NR_015505 103012 Mm.482523 NR_015505 ENSMUSG00000085396 Firre 5830467J12Rik|6720401G13Rik|AW048145 functional intergenic repeating RNA element ncRNA common_peak1_21_141_-0.289949376810731_7.00477243109932_0.829947819895537 chr17 83653455 83653982 + 0.829947819895537 NA Intergenic B1_Mur2|SINE|Alu -21823 NM_153512 225030 Mm.223506 NM_153512 ENSMUSG00000045053 Kcng3 KV6.3|Kv10.1a|Kv10.1b potassium voltage-gated channel, subfamily G, member 3 protein-coding common_peak1_203_1692_0.0755291416045267_10.7631308286979_0.829841529132196 chr1 138321917 138324090 + 0.829841529132196 NA Intergenic Intergenic 49265 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_29_200_-0.242395258581225_7.52985406188832_0.829806253651738 chr4 57307170 57307783 + 0.829806253651738 NA Intergenic Intergenic -5639 NM_011207 545622 Mm.246552 NM_011207 ENSMUSG00000038764 Ptpn3 9530011I20Rik|PTP-H1|PTPCL protein tyrosine phosphatase, non-receptor type 3 protein-coding common_peak1_29_200_-0.242395258581225_7.52985406188832_0.829806253651738-2 chr8 18951065 18951764 + 0.829806253651738 NA promoter-TSS (NM_001113350) promoter-TSS (NM_001113350) -439 NM_001113350 319581 Mm.111354 NM_176951 ENSMUSG00000039814 Xkr5 5430438H03Rik|XRG5 X-linked Kx blood group related 5 protein-coding common_peak2_113_810_0.107552926519258_9.7173345674769_0.829325324428476-2 chr14 20640161 20641875 + 0.829325324428476 NA Intergenic CpG 15522 NM_021508 59011 Mm.439911 NM_021508 ENSMUSG00000068697 Myoz1 2310001N11Rik|AV090278|FATZ|Myoz myozenin 1 protein-coding common_peak2_113_810_0.107552926519258_9.7173345674769_0.829325324428476 chr1 171605063 171608709 + 0.829325324428476 NA intron (NM_008534, intron 1 of 9) intron (NM_008534, intron 1 of 9) 448 NR_102726 17085 Mm.560 NM_008534 ENSMUSG00000004707 Ly9 AI893573|CD229|Lgp100|Ly-9|SLAMF3|T100 lymphocyte antigen 9 protein-coding common_peak2_70_539_-0.143656051203815_9.00498757144893_0.829320215623076 chr6 30896089 30897352 + 0.829320215623076 NA promoter-TSS (NM_017478) promoter-TSS (NM_017478) 74 NM_017478 54160 Mm.39896 NM_017478 ENSMUSG00000025607 Copg2 AW227625|gamma-2-COP coatomer protein complex, subunit gamma 2 protein-coding common_peak1_98_796_-0.116981450176308_9.57994518890232_0.828932544249029 chr8 71370695 71371717 + 0.828932544249029 NA promoter-TSS (NR_122030) promoter-TSS (NR_122030) -92 NM_029865 77090 Mm.440170 NM_029865 ENSMUSG00000002396 Ocel1 9430098E02Rik|AI326022|AI593544 occludin/ELL domain containing 1 protein-coding common_peak1_116_837_0.106271532061793_9.76394219973025_0.828724555800136 chr4 132921786 132922606 + 0.828724555800136 NA intron (NM_145553, intron 1 of 8) CpG 355 NM_145553 230789 Mm.11473 NM_145553 ENSMUSG00000028878 Fam76a - family with sequence similarity 76, member A protein-coding common_peak2_37_195_0.212266670468038_7.72084317934923_0.828452658567591 chr7 19321599 19322682 + 0.828452658567591 NA Intergenic PB1D11|SINE|Alu -12095 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding common_peak1_40_285_-0.198428071712963_8.06065730092191_0.828438956244445 chr1 16665177 16665855 + 0.828438956244445 NA intron (NM_027415, intron 1 of 2) CpG 325 NM_026392 70397 Mm.194225 NM_026392 ENSMUSG00000025940 Tmem70 1110020A09Rik|2210416J16Rik transmembrane protein 70 protein-coding common_peak1_40_285_-0.198428071712963_8.06065730092191_0.828438956244445-3 chr9 46012125 46012706 + 0.828438956244445 NA promoter-TSS (NM_027498) promoter-TSS (NM_027498) -405 NM_027498 70661 Mm.219459 NM_027498 ENSMUSG00000034135 Sik3 5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999 SIK family kinase 3 protein-coding common_peak1_40_285_-0.198428071712963_8.06065730092191_0.828438956244445-2 chr7 104464617 104465266 + 0.828438956244445 NA intron (NM_009099, intron 1 of 7) intron (NM_009099, intron 1 of 7) 252 NM_009099 20128 Mm.295578 NM_009099 ENSMUSG00000030921 Trim30a Rpt-1|Rpt1|Trim30 tripartite motif-containing 30A protein-coding common_peak2_81_531_0.132773140750594_9.12166900587649_0.828300690895243 chr9 21326705 21329303 + 0.828300690895243 NA intron (NM_001199186, intron 1 of 21) intron (NM_001199186, intron 1 of 21) 7285 NM_001199186 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding common_peak2_75_583_-0.136235733110414_9.12170669232481_0.828300690895046 chr13 74462134 74463547 + 0.828300690895046 NA Intergenic Intergenic 31110 NM_146231 235956 Mm.296909 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak1_50_367_-0.175891178929556_8.43561636659224_0.828068607486 chr8 126856283 126857159 + 0.828068607486 NA Intergenic Intergenic 89200 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak2_50_367_-0.175891178929556_8.43561636659224_0.828068607486 chr10 81059523 81060693 + 0.828068607486 NA promoter-TSS (NM_024499) promoter-TSS (NM_024499) 46 NM_024499 52551 Mm.30068 NM_024499 ENSMUSG00000004937 Sgta 5330427H01Rik|AI194281|D10Ertd190e|Sgt|Stg small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha protein-coding common_peak2_50_367_-0.175891178929556_8.43561636659224_0.828068607486-2 chr14 30869339 30870889 + 0.828068607486 NA intron (NM_028839, intron 4 of 7) intron (NM_028839, intron 4 of 7) -9143 NM_181390 66175 Mm.220895 NM_181390 ENSMUSG00000042485 Mustn1 1110028G01Rik|Mustang musculoskeletal, embryonic nuclear protein 1 protein-coding common_peak1_102_712_0.11378961733285_9.53465307511031_0.827945890217746 chr5 34543144 34544868 + 0.827945890217746 NA intron (NM_001145858, intron 1 of 12) intron (NM_001145858, intron 1 of 12) 641 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak2_307_3078_-0.058299988899039_11.5590961575953_0.82786774117002 chr14 20782283 20789564 + 0.82786774117002 NA intron (NM_178597, intron 2 of 20) intron (NM_178597, intron 2 of 20) 8165 NM_001039138 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding common_peak1_119_865_0.103657840243692_9.81005213484857_0.8278152918791 chr8 123036164 123038165 + 0.8278152918791 NA intron (NR_037865, intron 1 of 13) intron (NR_037865, intron 1 of 13) 5120 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_48_350_-0.178450983393876_8.36610172860762_0.827770287479205 chr2 153350366 153351301 + 0.827770287479205 NA intron (NM_001039939, intron 1 of 11) intron (NM_001039939, intron 1 of 11) 4694 NM_001039939 228790 Mm.330677 NM_001039939 ENSMUSG00000042548 Asxl1 mKIAA0978 additional sex combs like 1 protein-coding common_peak2_48_350_-0.178450983393876_8.36610172860762_0.827770287479205 chr3 75955874 75957392 + 0.827770287479205 NA 5' UTR (NM_175193, exon 1 of 15) 5' UTR (NM_175193, exon 1 of 15) 316 NM_175193 73124 Mm.249232 NM_175193 ENSMUSG00000034109 Golim4 3110027H23Rik|GIMPC|GPP130|Golph4|P138 golgi integral membrane protein 4 protein-coding common_peak1_122_892_0.103061416097487_9.85404707316997_0.827765238236076 chr2 128817373 128819048 + 0.827765238236076 NA promoter-TSS (NM_028248) promoter-TSS (NM_028248) -93 NM_028248 72477 Mm.259688 NM_028248 ENSMUSG00000014353 Tmem87b 2610301K12Rik|2810431I02Rik|AU014804 transmembrane protein 87B protein-coding common_peak2_134_1004_0.0973333676516237_10.0216464698921_0.827654391688346 chr11 62642867 62645914 + 0.827654391688346 NA intron (NM_198861, intron 1 of 3) intron (NM_198861, intron 1 of 3) 4133 NM_198861 192976 Mm.339972 NM_198861 ENSMUSG00000046417 Lrrc75a Fam211a leucine rich repeat containing 75A protein-coding common_peak1_42_301_-0.192677569071128_8.14206595478952_0.827556395212686-2 chr17 30103244 30103986 + 0.827556395212686 NA intron (NM_148926, intron 2 of 4) intron (NM_148926, intron 2 of 4) 98528 NM_148926 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding common_peak1_42_301_-0.192677569071128_8.14206595478952_0.827556395212686-3 chr4 45403100 45403952 + 0.827556395212686 NA intron (NM_001009949, intron 2 of 2) intron (NM_001009949, intron 2 of 2) 5240 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak1_42_301_-0.192677569071128_8.14206595478952_0.827556395212686 chr15 76190436 76190922 + 0.827556395212686 NA intron (NM_201385, intron 10 of 31) intron (NM_201385, intron 10 of 31) 5031 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_44_317_-0.186704317719723_8.21953079642449_0.827495442576444 chr7 126702702 126703201 + 0.827495442576444 NA intron (NM_001301374, intron 2 of 10) intron (NM_001301374, intron 2 of 10) 1269 NM_001301374 12721 Mm.290482 NM_009898 ENSMUSG00000030707 Coro1a Clabp|Lmb3|TACO|p57 coronin, actin binding protein 1A protein-coding common_peak2_44_317_-0.186704317719723_8.21953079642449_0.827495442576444 chr16 20651061 20652317 + 0.827495442576444 NA promoter-TSS (NR_027485) promoter-TSS (NR_027485) 37 NM_134101 21762 Mm.243234 NM_134101 ENSMUSG00000006998 Psmd2 9430095H01Rik|AA407121|TEG-190|Tex190 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 protein-coding unique_peak1_12_45_0.405246977397564_5.72618544475579_0.827470873527618 chr2 158175086 158175457 + 0.827470873527618 NA Intergenic Intergenic -16737 NR_036606 73399 Mm.416861 NR_036606 ENSMUSG00000078957 1700060C20Rik - RIKEN cDNA 1700060C20 gene ncRNA common_peak1_12_45_0.405246977397564_5.72618544475579_0.827470873527618 chr2 155074597 155074920 + 0.827470873527618 NA promoter-TSS (NM_016661) promoter-TSS (NM_016661) -261 NM_016661 269378 Mm.330692 NM_016661 ENSMUSG00000027597 Ahcy AA987153|AL024110|CuBP|SAHH S-adenosylhomocysteine hydrolase protein-coding common_peak1_125_920_0.101164125046802_9.89763940861474_0.827393470738622 chr2 79003116 79005134 + 0.827393470738622 NA Intergenic Lx2B|LINE|L1 135078 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_94_642_0.119794862947264_9.38857235880158_0.827296948503218 chr15 98088599 98090402 + 0.827296948503218 NA intron (NM_144851, intron 1 of 17) intron (NM_144851, intron 1 of 17) -3089 NM_001163488 18642 Mm.272582 NM_021514 ENSMUSG00000033065 Pfkm AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx phosphofructokinase, muscle protein-coding common_peak1_142_1230_-0.0934246999020303_10.2189026965334_0.827227560415887 chr5 21212630 21214682 + 0.827227560415887 NA intron (NM_175437, intron 5 of 30) B4A|SINE|B4 27389 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak2_158_1395_-0.0872069446132553_10.403479753903_0.827023133973462 chr16 31947291 31949509 + 0.827023133973462 NA promoter-TSS (NM_026554) promoter-TSS (NM_026554) 121 NR_027897 106264 Mm.347369 NM_025320 ENSMUSG00000107002 0610012G03Rik AI839730 RIKEN cDNA 0610012G03 gene ncRNA common_peak1_333_3393_-0.0554119326683473_11.7010648832085_0.827021917067025 chr10 13981897 13984567 + 0.827021917067025 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 16853 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak2_62_378_0.15555512178069_8.64383159906144_0.826791577591712 chr10 18946378 18948292 + 0.826791577591712 NA Intergenic Lx9|LINE|L1 64628 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_93_749_-0.121003386770868_9.49024509199781_0.826465346964489 chr4 135119501 135120933 + 0.826465346964489 NA promoter-TSS (NM_019732) promoter-TSS (NM_019732) -428 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_51_295_0.172580190198339_8.29574346072812_0.826455911854729-2 chr13 49247149 49248487 + 0.826455911854729 NA intron (NM_028340, intron 1 of 4) CpG 345 NM_025491 66329 Mm.34308 NM_025491 ENSMUSG00000021384 Susd3 1700017I11Rik|2810440J20Rik sushi domain containing 3 protein-coding common_peak1_51_295_0.172580190198339_8.29574346072812_0.826455911854729 chr2 135810868 135811695 + 0.826455911854729 NA intron (NM_013829, intron 2 of 36) intron (NM_013829, intron 2 of 36) 69451 NM_013829 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak2_51_295_0.172580190198339_8.29574346072812_0.826455911854729 chr12 17266479 17267382 + 0.826455911854729 NA intron (NM_027959, intron 1 of 12) intron (NM_027959, intron 1 of 12) 335 NM_027959 71853 Mm.222825 NM_027959 ENSMUSG00000020571 Pdia6 1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7 protein disulfide isomerase associated 6 protein-coding common_peak1_39_209_0.20350102115101_7.81599602824163_0.825830017633898 chr2 102899329 102900151 + 0.825830017633898 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 1925 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak2_39_209_0.20350102115101_7.81599602824163_0.825830017633898-2 chr19 46338156 46339328 + 0.825830017633898 NA promoter-TSS (NM_001164292) promoter-TSS (NM_001164292) -82 NM_001164292 67116 Mm.218848 NM_024192 ENSMUSG00000036748 Cuedc2 3010002G01Rik CUE domain containing 2 protein-coding common_peak2_39_209_0.20350102115101_7.81599602824163_0.825830017633898 chr11 60222411 60223603 + 0.825830017633898 NA Intergenic Intergenic -2380 NM_001313979 20787 Mm.278701 NM_011480 ENSMUSG00000020538 Srebf1 ADD1|SREBP-1a|SREBP1|SREBP1c|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding common_peak1_49_280_0.178201183101814_8.22352691177183_0.825732308526095 chr19 44145699 44146437 + 0.825732308526095 NA intron (NM_028607, intron 1 of 4) intron (NM_028607, intron 1 of 4) 378 NM_028607 73689 Mm.124685 NM_028607 ENSMUSG00000057506 Bloc1s2 2410089B13Rik|BLOS2|Bloc1s2a biogenesis of lysosomal organelles complex-1, subunit 2 protein-coding common_peak2_49_280_0.178201183101814_8.22352691177183_0.825732308526095 chr11 62730996 62732225 + 0.825732308526095 NA Intergenic CpG -2517 NM_133208 170740 Mm.339982 NM_133208 ENSMUSG00000005267 Zfp287 B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74 zinc finger protein 287 protein-coding unique_peak2_14_93_-0.37254473026629_6.36831648654449_0.825549665544934-2 chr5 45493366 45494013 + 0.825549665544934 NA intron (NM_024434, intron 1 of 12) CpG 315 NM_024434 66988 Mm.286830 NM_024434 ENSMUSG00000039682 Lap3 2410015L10Rik|AA410100|LAP-3|Lap|Lapep|Pep-7|Pep-S|Pep7|Peps leucine aminopeptidase 3 protein-coding unique_peak2_14_93_-0.37254473026629_6.36831648654449_0.825549665544934 chr1 144199886 144200688 + 0.825549665544934 NA Intergenic Intergenic -22915 NM_153171 246709 Mm.38271 NM_153171 ENSMUSG00000051079 Rgs13 - regulator of G-protein signaling 13 protein-coding unique_peak2_14_93_-0.37254473026629_6.36831648654449_0.825549665544934-3 chr8 11625324 11626071 + 0.825549665544934 NA intron (NM_001281975, intron 3 of 6) intron (NM_001281975, intron 3 of 6) 9339 NR_030781 102334 Mm.12459 NM_133971 ENSMUSG00000031508 Ankrd10 4833425P12Rik|AW549277 ankyrin repeat domain 10 protein-coding unique_peak2_31_215_-0.232021927851944_7.6388765382375_0.824561202189752 chr1 193129462 193130355 + 0.824561202189752 NA intron (NM_145415, intron 1 of 11) CpG 343 NM_145415 215193 Mm.173758 NM_145415 ENSMUSG00000016181 Diexf AA408296|AW045375|Def digestive organ expansion factor homolog (zebrafish) protein-coding common_peak1_45_251_0.187793191779948_8.07117651938989_0.824511808764972 chr14 25694122 25694841 + 0.824511808764972 NA intron (NM_134084, intron 1 of 5) intron (NM_134084, intron 1 of 5) 311 NM_134084 105675 Mm.41656 NM_134084 ENSMUSG00000021868 Ppif AW457192|CyP-D|CyP-F|CypD|PPIase peptidylprolyl isomerase F (cyclophilin F) protein-coding common_peak2_45_251_0.187793191779948_8.07117651938989_0.824511808764972 chr11 120377978 120378979 + 0.824511808764972 NA intron (NM_027980, intron 1 of 9) CpG-2938 268 NM_027980 71885 Mm.274890 NM_027980 ENSMUSG00000025384 Faap100 2310003H01Rik Fanconi anemia core complex associated protein 100 protein-coding common_peak2_41_223_0.196732032927251_7.90572093852123_0.824431129975581 chr4 149675502 149676670 + 0.824431129975581 NA promoter-TSS (NM_001164051) promoter-TSS (NM_001164051) 3 NM_001164051 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_96_777_-0.118287981622784_9.5444823541748_0.824417105581033 chr7 114116360 114118031 + 0.824417105581033 NA intron (NM_025846, intron 1 of 5) CpG 586 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak1_59_443_-0.159147122566045_8.71484230506708_0.82413728517533 chr5 9087365 9088077 + 0.82413728517533 NA Intergenic RLTR41|LTR|ERV1 -13016 NM_001081029 652925 Mm.439954 NM_001081029 ENSMUSG00000079659 Tmem243 4930420K17Rik|E030031F02Rik transmembrane protein 243, mitochondrial protein-coding common_peak2_59_443_-0.159147122566045_8.71484230506708_0.82413728517533 chr1 134955213 134956398 + 0.82413728517533 NA 5' UTR (NM_001081307, exon 1 of 24) 5' UTR (NM_001081307, exon 1 of 24) 135 NM_001081307 329251 Mm.188709 NM_001081307 ENSMUSG00000073557 Ppp1r12b 1810037O03Rik|9530009M10Rik|AI132431|Mypt2 protein phosphatase 1, regulatory (inhibitor) subunit 12B protein-coding common_peak2_30_149_0.237863514238426_7.34775044761509_0.823893099442262 chr13 55449216 55450267 + 0.823893099442262 NA intron (NM_011938, intron 2 of 15) intron (NM_011938, intron 2 of 15) -3365 NR_105908 102466770 NR_105908 ENSMUSG00000099058 Mir6943 Gm27791|mmu-mir-6943 microRNA 6943 ncRNA common_peak1_30_149_0.237863514238426_7.34775044761509_0.823893099442262 chr7 18909842 18910488 + 0.823893099442262 NA 5' UTR (NM_001033314, exon 1 of 14) 5' UTR (NM_001033314, exon 1 of 14) 239 NM_001033314 232933 Mm.333624 NM_001033314 ENSMUSG00000074358 Ccdc61 C530028I08Rik|Gm159 coiled-coil domain containing 61 protein-coding common_peak2_84_557_0.127520536023304_9.18788157984084_0.82388899891806-2 chr6 120491950 120494266 + 0.82388899891806 NA exon (NM_033567, exon 1 of 1) exon (NM_033567, exon 1 of 1) 699 NM_033567 94047 Mm.23088 NM_033567 ENSMUSG00000094626 Cecr6 AW048664 cat eye syndrome chromosome region, candidate 6 protein-coding common_peak2_84_557_0.127520536023304_9.18788157984084_0.82388899891806 chr5 35582574 35584071 + 0.82388899891806 NA non-coding (NR_045807, exon 4 of 4) non-coding (NR_045807, exon 4 of 4) 262 NM_030721 80911 Mm.291503 NM_030721 ENSMUSG00000029098 Acox3 BI685180|EST-s59|PCOX acyl-Coenzyme A oxidase 3, pristanoyl protein-coding common_peak2_78_610_-0.132929478705414_9.18856383046602_0.823888998917862 chr14 65100639 65103599 + 0.823888998917862 NA Intergenic Intergenic -4013 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak2_597_6495_0.0387421131695227_12.6847069737699_0.823531721541019 chr4 32247518 32253547 + 0.823531721541019 NA Intergenic Intergenic -166903 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_66_503_-0.146736223350192_8.90391181182482_0.823490106630254-2 chr4 156076640 156078348 + 0.823490106630254 NA Intergenic Intergenic -17692 NR_132444 100415901 Mm.437006 NR_132444 ENSMUSG00000086549 Gm13648 OTTMUSG00000013217 predicted gene 13648 ncRNA common_peak2_66_503_-0.146736223350192_8.90391181182482_0.823490106630254 chr2 28698205 28700506 + 0.823490106630254 NA promoter-TSS (NM_001033874) promoter-TSS (NM_001033874) 296 NM_027283 69987 Mm.239376 NM_027283 ENSMUSG00000026809 Spaca9 1700026L06Rik|MAST sperm acrosome associated 9 protein-coding common_peak1_60_363_0.156724810848276_8.58615704562283_0.823415874414499 chr4 129189833 129190584 + 0.823415874414499 NA promoter-TSS (NM_029036) promoter-TSS (NM_029036) 413 NM_134151 107271 Mm.145488 NM_134151 ENSMUSG00000028811 Yars AL024047|AU018965 tyrosyl-tRNA synthetase protein-coding common_peak2_92_625_0.120797873954972_9.3504177839101_0.822609303070781 chr11 4894705 4896083 + 0.822609303070781 NA promoter-TSS (NM_172438) promoter-TSS (NM_172438) 51 NM_172438 107829 Mm.28969 NM_172438 ENSMUSG00000034274 Thoc5 1700060C24Rik|A430085L24Rik|Fmip|PK1.3|Sgk2 THO complex 5 protein-coding common_peak2_113_940_-0.106939881992005_9.82458097173253_0.822585774836494 chr2 126596530 126598884 + 0.822585774836494 NA intron (NM_008230, intron 10 of 11) intron (NM_008230, intron 10 of 11) 20971 NM_008230 15186 Mm.18603 NM_008230 ENSMUSG00000027360 Hdc AW108189|Hdc-a|Hdc-c|Hdc-e|Hdc-s histidine decarboxylase protein-coding common_peak1_25_118_0.260603481332988_7.02511950397444_0.821816668298342-2 chr4 132008438 132008947 + 0.821816668298342 NA intron (NM_183428, intron 1 of 20) (TCTG)n|Simple_repeat|Simple_repeat 40386 NM_001128606 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding common_peak1_25_118_0.260603481332988_7.02511950397444_0.821816668298342 chr17 23748982 23749712 + 0.821816668298342 NA non-coding (NR_015472, exon 1 of 3) non-coding (NR_015472, exon 1 of 3) 111 NR_015472 638247 Mm.382600 NR_015472 ENSMUSG00000097006 9530082P21Rik E030034P13Rik RIKEN cDNA 9530082P21 gene ncRNA common_peak2_137_1179_-0.0953635128160535_10.1568893878412_0.821742086072203 chr1 191182275 191185153 + 0.821742086072203 NA promoter-TSS (NM_007498) promoter-TSS (NM_007498) -381 NM_007498 11910 Mm.2706 NM_007498 ENSMUSG00000026628 Atf3 LRG-21 activating transcription factor 3 protein-coding common_peak1_253_2441_-0.0650244796270041_11.2213352451739_0.821726721278178 chr2 71812664 71815150 + 0.821726721278178 NA intron (NM_001277970, intron 1 of 24) URR1A|DNA|hAT-Charlie 26968 NM_001277970 16403 Mm.225096 NM_008397 ENSMUSG00000027111 Itga6 5033401O05Rik|AI115430|Cd49f|VLA-6 integrin alpha 6 protein-coding common_peak1_16_66_0.3374470705164_6.23481272571597_0.821548731134755 chr10 19500353 19500845 + 0.821548731134755 NA Intergenic RLTR15|LTR|ERVK -91359 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding unique_peak2_16_66_0.3374470705164_6.23481272571597_0.821548731134755-2 chr3 9153921 9154475 + 0.821548731134755 NA Intergenic Intergenic 92234 NR_040597 75149 Mm.399324 NR_040597 ENSMUSG00000103116 4930539M17Rik - RIKEN cDNA 4930539M17 gene ncRNA common_peak1_16_66_0.3374470705164_6.23481272571597_0.821548731134755-3 chr2 128325212 128325609 + 0.821548731134755 NA intron (NR_028590, intron 2 of 2) intron (NR_028590, intron 2 of 2) 103941 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_16_66_0.3374470705164_6.23481272571597_0.821548731134755-2 chr14 56286318 56286711 + 0.821548731134755 NA Intergenic MLT1E2|LTR|ERVL-MaLR -24254 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding unique_peak2_16_66_0.3374470705164_6.23481272571597_0.821548731134755-3 chr4 11468421 11468954 + 0.821548731134755 NA Intergenic Lx6|LINE|L1 -17271 NM_001081183 66185 Mm.331487 NM_001081183 ENSMUSG00000040720 1110037F02Rik 4930422M05Rik|Kiaa1429|mKIAA1429 RIKEN cDNA 1110037F02 gene protein-coding unique_peak2_16_66_0.3374470705164_6.23481272571597_0.821548731134755 chr17 35230635 35231241 + 0.821548731134755 NA intron (NM_010909, intron 2 of 3) intron (NM_010909, intron 2 of 3) 4877 NM_010909 18038 Mm.300795 NM_010909 ENSMUSG00000042419 Nfkbil1 Def-7|IKBL nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 protein-coding common_peak1_336_3429_-0.054810045916545_11.7165878381019_0.821394827818152 chr7 135650144 135653732 + 0.821394827818152 NA promoter-TSS (NM_001316681) promoter-TSS (NM_001316681) 39 NM_001316681 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak2_71_547_-0.140122098715148_9.02797103360295_0.821217566155112 chr18 12740759 12742124 + 0.821217566155112 NA promoter-TSS (NM_027687) promoter-TSS (NM_027687) 86 NM_027687 71132 Mm.179740 NM_027687 ENSMUSG00000024430 Cabyr 1700016C01Rik|4933421A18Rik|CBP86|FSP-2 calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) protein-coding unique_peak2_33_230_-0.22160046925553_7.74094880678829_0.821044958039839 chr3 60438177 60439740 + 0.821044958039839 NA Intergenic B4A|SINE|B4 -33872 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_33_230_-0.22160046925553_7.74094880678829_0.821044958039839 chr19 3322273 3322921 + 0.821044958039839 NA promoter-TSS (NM_013495) promoter-TSS (NM_013495) -704 NM_013495 12894 Mm.18522 NM_013495 ENSMUSG00000024900 Cpt1a C730027G07|CPTI|Cpt1 carnitine palmitoyltransferase 1a, liver protein-coding common_peak1_148_1138_0.0913729703995099_10.1992385169079_0.820664403305847 chr1 131827255 131828844 + 0.820664403305847 NA promoter-TSS (NM_173865) promoter-TSS (NM_173865) 37 NM_173865 98396 Mm.389181 NM_173865 ENSMUSG00000013275 Slc41a1 AI573938|B230315F01Rik solute carrier family 41, member 1 protein-coding common_peak1_279_2520_0.0615022452240641_11.3305315254706_0.820478308945483 chr2 167361910 167364280 + 0.820478308945483 NA Intergenic Intergenic -13917 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak1_271_2430_0.0626513276908671_11.2786598418742_0.820275983712482 chr9 21237144 21240047 + 0.820275983712482 NA 5' UTR (NM_016679, exon 1 of 5) 5' UTR (NM_016679, exon 1 of 5) 737 NM_016679 50868 Mm.248266 NM_016679 ENSMUSG00000003308 Keap1 INRF2|mKIAA0132 kelch-like ECH-associated protein 1 protein-coding common_peak1_242_2315_-0.0669429388430718_11.1439480685677_0.82000288254322 chr6 136497296 136500308 + 0.82000288254322 NA Intergenic RMER10A|LTR|ERVL -20049 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_19_82_0.316094796283852_6.53308682948885_0.819779479040504-2 chr13 52979695 52980109 + 0.819779479040504 NA intron (NM_017373, intron 1 of 1) (A)n|Simple_repeat|Simple_repeat 1137 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_19_82_0.316094796283852_6.53308682948885_0.819779479040504-3 chr13 113054513 113054953 + 0.819779479040504 NA intron (NM_001281487, intron 2 of 11) intron (NM_001281487, intron 2 of 11) -8345 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak2_19_82_0.316094796283852_6.53308682948885_0.819779479040504 chr1 170884937 170885620 + 0.819779479040504 NA exon (NM_023173, exon 1 of 6) exon (NM_023173, exon 1 of 6) 262 NM_023173 80915 Mm.34365 NM_023173 ENSMUSG00000026659 Dusp12 1190004O14Rik|AA027408|AW049275|ENSMUSG00000045460|ESTM36|LMW-DSP4|T-DSP4|VH1|mVH1 dual specificity phosphatase 12 protein-coding unique_peak2_19_82_0.316094796283852_6.53308682948885_0.819779479040504-2 chr15 37773575 37774379 + 0.819779479040504 NA intron (NM_134094, intron 1 of 6) intron (NM_134094, intron 1 of 6) 18023 NM_001170866 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak1_19_82_0.316094796283852_6.53308682948885_0.819779479040504-4 chr6 129051314 129051825 + 0.819779479040504 NA intron (NR_024262, intron 1 of 5) RLTR18B|LTR|ERVK 5668 NR_024263 232408 Mm.259262 NM_153094 ENSMUSG00000030154 Klrb1f A630024B12Rik|Nkr-p1f|Nkrp1-f|Nkrp1f killer cell lectin-like receptor subfamily B member 1F protein-coding unique_peak2_19_82_0.316094796283852_6.53308682948885_0.819779479040504 chr13 96554733 96555384 + 0.819779479040504 NA intron (NM_001164222, intron 2 of 16) Lx7|LINE|L1 12323 NM_023420 68018 Mm.24125 NM_023420 ENSMUSG00000021669 Col4a3bp 2810404O15Rik|9230101K08Rik|AU016711|CERT|GPBP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein-coding common_peak1_19_82_0.316094796283852_6.53308682948885_0.819779479040504 chr10 81978696 81979203 + 0.819779479040504 NA Intergenic CpG -48469 NM_199062 331188 Mm.351497 NM_199062 ENSMUSG00000096718 Zfp781 A130081B01 zinc finger protein 781 protein-coding common_peak1_286_2827_-0.0605870304785032_11.4352728895701_0.819531279756919 chr2 27026872 27029731 + 0.819531279756919 NA promoter-TSS (NM_172659) promoter-TSS (NM_172659) -303 NM_001177627 227659 Mm.41203 NM_172659 ENSMUSG00000036067 Slc2a6 A330096C23|F630103L12Rik|Glut6|Glut9 solute carrier family 2 (facilitated glucose transporter), member 6 protein-coding common_peak1_65_402_0.149296230319269_8.7292841436876_0.819203477200556 chr13 13590330 13591113 + 0.819203477200556 NA intron (NM_010748, intron 1 of 52) CpG 312 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding common_peak1_32_162_0.228591793429803_7.46302405094598_0.818952963370068 chr4 116824273 116824893 + 0.818952963370068 NA Intergenic Intergenic -3075 NM_146256 242642 Mm.279897 NM_146256 ENSMUSG00000043155 Hpdl A830048M07Rik|BC034099|Gloxd1 4-hydroxyphenylpyruvate dioxygenase-like protein-coding common_peak1_53_391_-0.165889966089257_8.53176486107058_0.818940336625377-2 chr12 25255461 25256590 + 0.818940336625377 NA Intergenic MTE2b|LTR|ERVL-MaLR 126851 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_53_391_-0.165889966089257_8.53176486107058_0.818940336625377 chr10 75504943 75505685 + 0.818940336625377 NA Intergenic PB1D11|SINE|Alu 12008 NM_175133 68778 Mm.29382 NM_175133 ENSMUSG00000033416 Gucd1 1110038D17Rik guanylyl cyclase domain containing 1 protein-coding common_peak1_35_245_-0.211216832280217_7.83690608919913_0.818927768387547 chr1 93343629 93344170 + 0.818927768387547 NA intron (NM_023200, intron 1 of 9) CpG 254 NM_023200 66385 Mm.88704 NM_023200 ENSMUSG00000026275 Ppp1r7 2310014J01Rik|SDS22 protein phosphatase 1, regulatory (inhibitor) subunit 7 protein-coding common_peak1_23_155_-0.271626750770154_7.14958884347717_0.818626035874197 chr4 46602464 46602929 + 0.818626035874197 NA promoter-TSS (NM_001164804) promoter-TSS (NM_001164804) -767 NM_001164804 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding unique_peak2_23_155_-0.271626750770154_7.14958884347717_0.818626035874197 chr17 86437038 86438219 + 0.818626035874197 NA intron (NM_011104, intron 2 of 14) intron (NM_011104, intron 2 of 14) -150450 NR_045435 72104 Mm.443401 NR_045435 ENSMUSG00000100738 2010106C02Rik - RIKEN cDNA 2010106C02 gene ncRNA common_peak1_23_155_-0.271626750770154_7.14958884347717_0.818626035874197-2 chr4 119812861 119813412 + 0.818626035874197 NA Intergenic Intergenic -1542 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak2_98_677_0.11631300067782_9.46329796347525_0.818515037243107 chr2 161108140 161109147 + 0.818515037243107 NA intron (NM_173368, intron 1 of 36) CpG 443 NM_173368 71389 Mm.122738 NM_173368 ENSMUSG00000057133 Chd6 5430439G14Rik|6330406J24Rik|CHD-6 chromodomain helicase DNA binding protein 6 protein-coding common_peak1_203_1693_0.0746772401679703_10.7635567794162_0.818257963611274 chr2 127247163 127248975 + 0.818257963611274 NA promoter-TSS (NM_025296) promoter-TSS (NM_025296) 94 NM_175145 69470 Mm.200889 NM_175145 ENSMUSG00000034850 Tmem127 2310003P10Rik|AI314202|AI317350 transmembrane protein 127 protein-coding common_peak1_641_7095_0.0369269523943494_12.8112537704982_0.818043525150863 chr6 129233089 129238700 + 0.818043525150863 NA intron (NR_040265, intron 1 of 2) intron (NR_040265, intron 1 of 2) 2151 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak1_111_920_-0.107267973700699_9.79342335924099_0.818017180503394 chr7 24399044 24400244 + 0.818017180503394 NA promoter-TSS (NM_028047) promoter-TSS (NM_028047) 16 NM_028047 71997 Mm.150977 NM_028047 ENSMUSG00000002210 Smg9 1500002O20Rik|AI429693|N28092 smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_90_608_0.122046624813715_9.31132173031319_0.818005260627066 chr18 31759294 31760749 + 0.818005260627066 NA promoter-TSS (NM_001242430) promoter-TSS (NM_001242430) 197 NM_153515 225339 Mm.290804 NM_153515 ENSMUSG00000041915 Ammecr1l 5430429D03Rik|AU022236|AU040755|AW111353|E230022H04Rik AMME chromosomal region gene 1-like protein-coding common_peak1_11_40_0.429611152287656_5.57235758076191_0.817484656603571 chr6 72548707 72549063 + 0.817484656603571 NA promoter-TSS (NM_001042534) promoter-TSS (NM_001042534) -388 NM_001042534 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak1_17_113_-0.328204652292074_6.6687876880187_0.817225771078754-2 chr6 28928778 28929252 + 0.817225771078754 NA Intergenic IAPLTR1_Mm|LTR|ERVK -93604 NR_029567 387237 NR_029567 ENSMUSG00000065469 Mir129-1 Mirn129-1|Mirn129b|miR-129b|mir-129-1 microRNA 129-1 ncRNA unique_peak2_17_113_-0.328204652292074_6.6687876880187_0.817225771078754 chr9 108048484 108049049 + 0.817225771078754 NA promoter-TSS (NM_177910) promoter-TSS (NM_177910) -524 NM_177910 331026 Mm.22554 NM_177910 ENSMUSG00000070284 Gmppb AI317178|E430010H19 GDP-mannose pyrophosphorylase B protein-coding common_peak1_17_113_-0.328204652292074_6.6687876880187_0.817225771078754-3 chr9 106202799 106203092 + 0.817225771078754 NA promoter-TSS (NM_011876) promoter-TSS (NM_011876) -163 NM_011876 23999 Mm.274346 NM_011876 ENSMUSG00000023277 Twf2 A6-related|AU014993|Ptk9l|Ptk9r twinfilin actin binding protein 2 protein-coding common_peak1_17_113_-0.328204652292074_6.6687876880187_0.817225771078754 chr15 75616690 75617096 + 0.817225771078754 NA 5' UTR (NM_011759, exon 1 of 3) 5' UTR (NM_011759, exon 1 of 3) 209 NM_011759 22701 Mm.87210 NM_011759 ENSMUSG00000047003 Zfp41 CTfin92|Zfp-41 zinc finger protein 41 protein-coding common_peak1_101_703_0.114851469676516_9.51685735347555_0.817135122070643 chr16 62786113 62787370 + 0.817135122070643 NA promoter-TSS (NM_178925) promoter-TSS (NM_178925) -25 NM_178925 106338 Mm.26321 NM_178925 ENSMUSG00000050312 Nsun3 6720484A09Rik|AU022521 NOL1/NOP2/Sun domain family member 3 protein-coding common_peak1_22_100_0.280249321341715_6.79833614342265_0.817063276037886 chr1 133798949 133799490 + 0.817063276037886 NA Intergenic Intergenic -45472 NM_213616 381290 Mm.188617 NM_213616 ENSMUSG00000026463 Atp2b4 Pmca4 ATPase, Ca++ transporting, plasma membrane 4 protein-coding common_peak1_22_100_0.280249321341715_6.79833614342265_0.817063276037886-3 chr13 113609106 113609493 + 0.817063276037886 NA intron (NM_130796, intron 1 of 1) intron (NM_130796, intron 1 of 1) 9265 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak1_22_100_0.280249321341715_6.79833614342265_0.817063276037886-6 chr9 118101510 118102144 + 0.817063276037886 NA intron (NM_026442, intron 2 of 3) RLTR20B2|LTR|ERVK 48369 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding unique_peak2_22_100_0.280249321341715_6.79833614342265_0.817063276037886 chr1 54829885 54830782 + 0.817063276037886 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 96054 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_22_100_0.280249321341715_6.79833614342265_0.817063276037886-5 chr9 13468786 13469367 + 0.817063276037886 NA Intergenic Intergenic 37715 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA common_peak1_22_100_0.280249321341715_6.79833614342265_0.817063276037886-4 chr7 4063136 4063632 + 0.817063276037886 NA promoter-TSS (NM_001113474) promoter-TSS (NM_001113474) -180 NM_001302676 52855 Mm.290880 NM_178611 ENSMUSG00000055541 Lair1 5133400O11Rik|BB115266|D7Bwg0421e|Lair-1 leukocyte-associated Ig-like receptor 1 protein-coding common_peak2_22_100_0.280249321341715_6.79833614342265_0.817063276037886 chr12 85270026 85270808 + 0.817063276037886 NA intron (NM_001304475, intron 1 of 11) CpG 174 NM_001304475 217716 Mm.311981 NM_145446 ENSMUSG00000021245 Mlh3 AV125803|BB126472 mutL homolog 3 protein-coding unique_peak2_22_100_0.280249321341715_6.79833614342265_0.817063276037886-2 chr10 8369784 8370587 + 0.817063276037886 NA intron (NM_177387, intron 2 of 7) intron (NM_177387, intron 2 of 7) 148640 NM_177387 338362 Mm.41163 NM_177387 ENSMUSG00000047712 Ust D930010O20Rik|UA2OST uronyl-2-sulfotransferase protein-coding common_peak1_22_100_0.280249321341715_6.79833614342265_0.817063276037886-2 chr12 73719737 73720204 + 0.817063276037886 NA intron (NM_001313977, intron 10 of 14) intron (NM_001313977, intron 10 of 14) 135174 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_121_884_0.101598117262968_9.84033270360185_0.816895672807579 chr12 100977207 100978857 + 0.816895672807579 NA intron (NM_026681, intron 4 of 29) intron (NM_026681, intron 4 of 29) 43736 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak1_28_192_-0.243793722755512_7.47056017589032_0.816028550745631-2 chr10 98781730 98782203 + 0.816028550745631 NA Intergenic Intergenic -133186 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_28_192_-0.243793722755512_7.47056017589032_0.816028550745631-3 chr14 118132428 118132768 + 0.816028550745631 NA intron (NM_029578, intron 1 of 11) intron (NM_029578, intron 1 of 11) 167 NM_029578 76355 Mm.251537 NM_029578 ENSMUSG00000022130 Tgds 2610017J16Rik|2610025M23Rik|AI648925 TDP-glucose 4,6-dehydratase protein-coding common_peak1_28_192_-0.243793722755512_7.47056017589032_0.816028550745631 chr10 51453856 51454489 + 0.816028550745631 NA Intergenic Intergenic -26440 NM_008147 14727 Mm.439661 NM_008147 ENSMUSG00000062593 Lilr4b Gp49a|gp49 leukocyte immunoglobulin-like receptor, subfamily B, member 4B protein-coding common_peak1_28_192_-0.243793722755512_7.47056017589032_0.816028550745631-6 chr6 90679243 90679731 + 0.816028550745631 NA intron (NM_001134383, intron 4 of 13) intron (NM_001134383, intron 4 of 13) 37042 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_28_192_-0.243793722755512_7.47056017589032_0.816028550745631-7 chr9 41077905 41078512 + 0.816028550745631 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) -73580 NM_019465 54698 Mm.42791 NM_019465 ENSMUSG00000032021 Crtam - cytotoxic and regulatory T cell molecule protein-coding common_peak1_28_192_-0.243793722755512_7.47056017589032_0.816028550745631-4 chr15 58135187 58135681 + 0.816028550745631 NA promoter-TSS (NM_027435) promoter-TSS (NM_027435) -352 NM_027435 70472 Mm.221758 NM_027435 ENSMUSG00000022360 Atad2 2610509G12Rik ATPase family, AAA domain containing 2 protein-coding common_peak1_28_192_-0.243793722755512_7.47056017589032_0.816028550745631-5 chr2 163812721 163813371 + 0.816028550745631 NA Intergenic Intergenic -7788 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak2_372_3608_0.0514085960643698_11.8430877259294_0.815969714065414 chr12 80789949 80793161 + 0.815969714065414 NA intron (NM_178682, intron 1 of 5) intron (NM_178682, intron 1 of 5) 1023 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding common_peak1_151_1322_-0.0893962093227199_10.3248992416173_0.815966606767373-2 chr5 122158266 122159518 + 0.815966606767373 NA intron (NM_013636, intron 1 of 6) intron (NM_013636, intron 1 of 6) 613 NM_013636 19047 Mm.280784 NM_013636 ENSMUSG00000004455 Ppp1cc PP-1G|PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform protein-coding common_peak1_151_1322_-0.0893962093227199_10.3248992416173_0.815966606767373 chr3 108200044 108201399 + 0.815966606767373 NA exon (NM_001081320, exon 1 of 3) exon (NM_001081320, exon 1 of 3) 113 NM_028061 72023 Mm.246391 NM_028061 ENSMUSG00000048796 Cyb561d1 1600010M23Rik|AI605489|AW457162 cytochrome b-561 domain containing 1 protein-coding common_peak2_249_2186_0.0659955851529688_11.1277352976246_0.815872125131835 chr4 134733691 134738717 + 0.815872125131835 NA Intergenic Intergenic 31800 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak1_34_175_0.222014095886236_7.57043866658042_0.815861670120092-2 chr7 142375008 142375533 + 0.815861670120092 NA TTS (NM_009983) TTS (NM_009983) -3011 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_34_175_0.222014095886236_7.57043866658042_0.815861670120092 chr18 62164418 62165130 + 0.815861670120092 NA Intergenic Intergenic 15207 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak2_186_1517_0.0789615986865577_10.6074368747587_0.815845516906841 chr11 106561978 106565780 + 0.815845516906841 NA intron (NM_198292, intron 2 of 11) PB1D10|SINE|Alu 49051 NM_198292 21763 Mm.102407 NM_198292 ENSMUSG00000040548 Tex2 4930568E07Rik|AI553404|Def-5|Taz4 testis expressed gene 2 protein-coding common_peak1_37_261_-0.206446486954204_7.93019975806035_0.815836740494173 chr19 20409613 20410133 + 0.815836740494173 NA intron (NR_045817, intron 1 of 2) intron (NR_045817, intron 1 of 2) 4585 NR_045817 68994 Mm.261028 NM_183277 ENSMUSG00000094732 1500015L24Rik - RIKEN cDNA 1500015L24 gene ncRNA common_peak1_37_261_-0.206446486954204_7.93019975806035_0.815836740494173-2 chr4 116995318 116996050 + 0.815836740494173 NA exon (NM_175244, exon 1 of 21) exon (NM_175244, exon 1 of 21) 336 NM_175244 76608 Mm.251420 NM_175244 ENSMUSG00000046861 Hectd3 1700064K09Rik|AI467540|AW743312 HECT domain containing 3 protein-coding unique_peak2_37_261_-0.206446486954204_7.93019975806035_0.815836740494173 chr6 130138908 130140855 + 0.815836740494173 NA intron (NM_013793, intron 3 of 7) (CAAAAA)n|Simple_repeat|Simple_repeat -9983 NM_001101620 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding common_peak1_92_739_-0.120564739628723_9.47109909070195_0.815598000959708 chr9 57708361 57709198 + 0.815598000959708 NA intron (NM_153799, intron 1 of 6) CpG 210 NM_153799 353190 Mm.268104 NM_153799 ENSMUSG00000038957 Edc3 AA517853|Lsm16|Yjdc enhancer of mRNA decapping 3 protein-coding common_peak2_169_1345_0.0837914644285309_10.4363584268246_0.815250858773678 chr5 73283755 73285861 + 0.815250858773678 NA promoter-TSS (NR_040689) promoter-TSS (NR_040689) -624 NR_040688 72276 Mm.271215 NR_040687 ENSMUSG00000100175 1700025M24Rik - RIKEN cDNA 1700025M24 gene ncRNA common_peak1_204_1704_0.0739928280322122_10.7725524379276_0.815005151360874 chr11 70237180 70238831 + 0.815005151360874 NA promoter-TSS (NM_026757) promoter-TSS (NM_026757) -91 NM_145758 104457 Mm.30016 NM_026757 ENSMUSG00000020831 0610010K14Rik 1110020A23Rik|AL033328|AU045833|Bap18 RIKEN cDNA 0610010K14 gene protein-coding common_peak1_27_130_0.253141748480475_7.15999387577769_0.814996423841183-2 chr3 106452630 106453284 + 0.814996423841183 NA Intergenic Intergenic -29474 NM_001093754 72121 Mm.14816 NM_028110 ENSMUSG00000027901 Dennd2d 2010308M01Rik|AI451421 DENN/MADD domain containing 2D protein-coding common_peak1_27_130_0.253141748480475_7.15999387577769_0.814996423841183-3 chr6 120978223 120978612 + 0.814996423841183 NA intron (NM_001270475, intron 20 of 31) intron (NM_001270475, intron 20 of 31) -61597 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding unique_peak2_27_130_0.253141748480475_7.15999387577769_0.814996423841183 chr3 52029587 52030413 + 0.814996423841183 NA intron (NM_001004176, intron 1 of 4) intron (NM_001004176, intron 1 of 4) 75006 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like 3 (Drosophila) protein-coding common_peak1_27_130_0.253141748480475_7.15999387577769_0.814996423841183 chr19 53450778 53451413 + 0.814996423841183 NA non-coding (NR_028427, exon 5 of 10) non-coding (NR_028427, exon 5 of 10) 13701 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA unique_peak2_13_86_-0.382991057017158_6.25144796734015_0.814709005062661-2 chr11 87578380 87579045 + 0.814709005062661 NA intron (NM_001284398, intron 1 of 10) intron (NM_001284398, intron 1 of 10) 323 NM_001284398 18952 Mm.2214 NM_011129 ENSMUSG00000020486 Sept4 ARTS|Bh5|OTTMUSG00000001265|Pnutl2 septin 4 protein-coding unique_peak2_13_86_-0.382991057017158_6.25144796734015_0.814709005062661-3 chr4 106139859 106140575 + 0.814709005062661 NA Intergenic Intergenic -175996 NM_183225 329908 Mm.234544 NM_183225 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 protein-coding unique_peak2_13_86_-0.382991057017158_6.25144796734015_0.814709005062661 chr1 152024924 152025802 + 0.814709005062661 NA intron (NM_197990, intron 1 of 5) MTD|LTR|ERVL-MaLR 64957 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak1_272_2661_-0.0618152970385601_11.3473872073926_0.814496416506839 chr7 63939138 63940501 + 0.814496416506839 NA promoter-TSS (NM_021366) promoter-TSS (NM_021366) -904 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding unique_peak2_20_134_-0.299340953252333_6.92714512042466_0.814469659314315-2 chr3 138464096 138465048 + 0.814469659314315 NA intron (NM_175224, intron 9 of 10) B3|SINE|B2 21479 NM_007410 11532 Mm.3874 NM_007410 ENSMUSG00000028138 Adh5 Adh-5|Adh3|GSNOR alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding unique_peak2_20_134_-0.299340953252333_6.92714512042466_0.814469659314315 chr12 91581362 91582303 + 0.814469659314315 NA intron (NM_175335, intron 2 of 8) intron (NM_175335, intron 2 of 8) 7817 NM_031391 83602 Mm.275728 NM_031391 ENSMUSG00000020962 Gtf2a1 6330549H03Rik|AA536742|AA959775|AW060250|TfIIAa/b|Tfiia1 general transcription factor II A, 1 protein-coding common_peak1_20_134_-0.299340953252333_6.92714512042466_0.814469659314315 chr18 63708698 63709215 + 0.814469659314315 NA intron (NM_001014981, intron 1 of 27) intron (NM_001014981, intron 1 of 27) 261 NM_001014981 104082 Mm.30850 NM_001014981 ENSMUSG00000040560 Wdr7 AI462727|TRAG|mKIAA0541 WD repeat domain 7 protein-coding common_peak2_20_134_-0.299340953252333_6.92714512042466_0.814469659314315 chr10 44529319 44530171 + 0.814469659314315 NA Intergenic CpG -70997 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding common_peak1_168_1499_-0.0829329368538332_10.5092803169563_0.814281982628986 chr3 54734372 54736174 + 0.814281982628986 NA promoter-TSS (NM_025442) promoter-TSS (NM_025442) 91 NM_027148 69639 Mm.29253 NM_027148 ENSMUSG00000027752 Exosc8 2310032N20Rik|CIP3|mKIAA4013 exosome component 8 protein-coding common_peak2_340_3477_-0.0539785994444291_11.7370529175844_0.814076704382834 chr12 51690213 51692739 + 0.814076704382834 NA exon (NM_001172098, exon 1 of 16) exon (NM_001172098, exon 1 of 16) 438 NM_001172098 94186 Mm.65979 NM_052973 ENSMUSG00000020954 Strn3 Gs2na|SG2NA striatin, calmodulin binding protein 3 protein-coding unique_peak2_39_277_-0.201194533906374_8.01834380577032_0.813953620037371 chr3 96847031 96848640 + 0.813953620037371 NA intron (NM_001146001, intron 1 of 8) intron (NM_001146001, intron 1 of 8) 15161 NM_001146001 59020 Mm.489677 NM_021517 ENSMUSG00000038298 Pdzk1 1700023D20Rik|2610507N21Rik|4921513F16Rik|AI267131|AI314638|AL022680|D3Ertd537e|Pdzd1|mPDZK1 PDZ domain containing 1 protein-coding common_peak2_67_512_-0.14605413226017_8.92978794947697_0.813846718108487 chr9 15305544 15307046 + 0.813846718108487 NA promoter-TSS (NM_027261) promoter-TSS (NM_027261) 81 NM_027261 75316 Mm.354115 NM_026541 ENSMUSG00000031939 Taf1d 2810003M17Rik|4930553M18Rik|5930426I11Rik|Josd3|TAF(I)41|TAFI41 TATA-box binding protein associated factor, RNA polymerase I, D protein-coding common_peak1_336_3428_-0.054389373792004_11.7163775020396_0.813308008079781 chr8 91069434 91071408 + 0.813308008079781 NA intron (NM_001282000, intron 1 of 20) CpG 364 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 retinoblastoma-like 2 protein-coding common_peak1_250_2198_0.0651655919590297_11.1352146848345_0.813125208841911 chr12 32378472 32380220 + 0.813125208841911 NA exon (NM_001162903, exon 1 of 1) exon (NM_001162903, exon 1 of 1) 557 NM_001162903 72123 Mm.341352 NM_028111 ENSMUSG00000090946 Ccdc71l 2010109K11Rik|AV375874 coiled-coil domain containing 71 like protein-coding common_peak1_41_293_-0.195585389851509_8.10187964991061_0.813073848916545 chr10 93083507 93084469 + 0.813073848916545 NA Intergenic Intergenic -76888 NM_146239 237459 Mm.217404 NM_146239 ENSMUSG00000020015 Cdk17 6430598J10Rik|Pctk2 cyclin-dependent kinase 17 protein-coding common_peak2_43_309_-0.189714351393931_8.18126722957727_0.813036597230928 chr15 76697189 76698616 + 0.813036597230928 NA exon (NM_182805, exon 5 of 11) exon (NM_182805, exon 5 of 11) 1138 NM_182805 76282 Mm.30130 NM_182805 ENSMUSG00000022546 Gpt 1300007J06Rik|2310022B03Rik|ALT|ALT1|Gpt-1|Gpt1 glutamic pyruvic transaminase, soluble protein-coding common_peak1_61_371_0.154135704812632_8.61622666351435_0.812757738100195 chr12 112628774 112629757 + 0.812757738100195 NA intron (NM_007421, intron 2 of 12) intron (NM_007421, intron 2 of 12) 9218 NM_007421 11565 Mm.3440 NM_007421 ENSMUSG00000011148 Adssl1 AI528595|Adss|Adss1 adenylosuccinate synthetase like 1 protein-coding common_peak1_134_1005_0.0958985639123888_10.0223638717617_0.812675389986875 chr8 124020410 124021855 + 0.812675389986875 NA intron (NM_133966, intron 1 of 4) CpG 177 NM_133966 102162 Mm.291777 NM_133966 ENSMUSG00000038697 Taf5l 1110005N04Rik|AI849020 TATA-box binding protein associated factor 5 like protein-coding common_peak1_136_1168_-0.0947216579967964_10.1436983855333_0.812465444386601 chr18 3382736 3383897 + 0.812465444386601 NA promoter-TSS (NM_029402) promoter-TSS (NM_029402) 91 NM_029402 71745 Mm.291707 NM_029402 ENSMUSG00000024231 Cul2 1300003D18Rik|4932411N15Rik|AI327301|mKIAA4106 cullin 2 protein-coding common_peak1_116_838_0.104550965321321_9.76480248310049_0.812314914270837 chr5 121711105 121712699 + 0.812314914270837 NA exon (NM_009125, exon 1 of 25) exon (NM_009125, exon 1 of 25) 293 NM_009125 20239 Mm.260900 NM_009125 ENSMUSG00000042605 Atxn2 9630045M23Rik|ATX2|AW544490|Sca2 ataxin 2 protein-coding common_peak2_231_1991_0.0684983160035539_10.9942510900699_0.812226731432173 chr15 59794585 59797805 + 0.812226731432173 NA Intergenic Intergenic -1236 NR_045076 100503021 Mm.402924 NR_045076 Gm19510 - predicted gene, 19510 ncRNA common_peak1_200_1844_-0.0747268846447522_10.8120416586254_0.81219095234472 chr15 80222664 80224776 + 0.81219095234472 NA Intergenic MTC|LTR|ERVL-MaLR -10360 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak1_131_977_0.0968539150813577_9.98211761249291_0.812171151494352 chr8 46781124 46782459 + 0.812171151494352 NA intron (NM_008391, intron 1 of 8) B4A|SINE|B4 42046 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_128_949_0.0980779831889222_9.94082269481277_0.81185865361718 chr9 35211104 35212026 + 0.81185865361718 NA promoter-TSS (NM_172291) promoter-TSS (NM_172291) 362 NM_026130 67398 Mm.284688 NM_026130 ENSMUSG00000032042 Srpr 1300011P19Rik|D11Mgi27|Srpra signal recognition particle receptor ('docking protein') protein-coding common_peak1_77_601_-0.134063915965484_9.16658771877696_0.811783379335378 chr1 91079340 91080371 + 0.811783379335378 NA intron (NM_008515, intron 6 of 22) intron (NM_008515, intron 6 of 22) 26411 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_36_189_0.209928042880462_7.67481962977118_0.811736016858031-2 chr7 45742636 45743350 + 0.811736016858031 NA intron (NM_017465, intron 1 of 6) intron (NM_017465, intron 1 of 6) 16562 NM_017465 54200 Mm.271634 NM_017465 ENSMUSG00000003271 Sult2b1 AI326997|BB173635|ST2B1|SULT2B sulfotransferase family, cytosolic, 2B, member 1 protein-coding common_peak1_36_189_0.209928042880462_7.67481962977118_0.811736016858031 chr12 83596742 83597352 + 0.811736016858031 NA promoter-TSS (NM_183154) promoter-TSS (NM_183154) 100 NM_183154 217695 Mm.59257 NM_183154 ENSMUSG00000042628 Zfyve1 DFCP1|G630053K23|TAFF1|ZNFN2A1|mKIAA1589 zinc finger, FYVE domain containing 1 protein-coding common_peak2_127_1077_-0.0980512660682695_10.0251158297184_0.811692975137308 chr14 54553186 54555154 + 0.811692975137308 NA intron (NM_145462, intron 1 of 9) CpG 191 NM_145462 219072 Mm.202152 NM_145462 ENSMUSG00000022177 Haus4 9430093H08Rik|AU016300|D14Ertd500e HAUS augmin-like complex, subunit 4 protein-coding common_peak2_38_202_0.207607532422684_7.76913968339652_0.811486046247764 chr15 103168496 103169735 + 0.811486046247764 NA Intergenic CpG -5831 NM_027885 71726 Mm.254820 NM_027885 ENSMUSG00000036061 Smug1 1200013B09Rik|A930006H09Rik|C85220 single-strand selective monofunctional uracil DNA glycosylase protein-coding common_peak1_446_4523_0.0456763042710868_12.1662213661254_0.811476500286175 chr8 120535719 120538788 + 0.811476500286175 NA promoter-TSS (NM_001145896) promoter-TSS (NM_001145896) -156 NM_001145896 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_48_273_0.178844153950157_8.1874541599356_0.811277774010943 chr8 23237082 23237800 + 0.811277774010943 NA intron (NM_024240, intron 1 of 7) CpG 227 NM_024240 109145 Mm.27945 NM_024240 ENSMUSG00000031546 Gins4 2810037C03Rik|4933405K01Rik|Sld5 GINS complex subunit 4 (Sld5 homolog) protein-coding unique_peak2_48_273_0.178844153950157_8.1874541599356_0.811277774010943 chr1 88707529 88709711 + 0.811277774010943 NA Intergenic Intergenic -6429 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_65_494_-0.147352456119735_8.8776084869071_0.810995878679117 chr7 116093283 116094104 + 0.810995878679117 NA promoter-TSS (NR_029433) promoter-TSS (NR_029433) 313 NM_019772 56372 Mm.24231 NM_019772 ENSMUSG00000030663 1110004F10Rik Smacp|Smap|sid2057|sid2057p RIKEN cDNA 1110004F10 gene protein-coding common_peak1_56_416_-0.15940485389449_8.62420114649742_0.810160847678148 chr5 123907160 123907899 + 0.810160847678148 NA intron (NM_026603, intron 1 of 7) intron (NM_026603, intron 1 of 7) 254 NM_026603 68184 Mm.28549 NM_026603 ENSMUSG00000023106 Denr 1500003K04Rik density-regulated protein protein-coding common_peak2_44_244_0.189540698562061_8.0314082882836_0.810024790325347-2 chr18 58658979 58660319 + 0.810024790325347 NA exon (NM_025478, exon 1 of 5) exon (NM_025478, exon 1 of 5) 167 NM_025478 66307 Mm.182574 NM_025478 ENSMUSG00000024601 Isoc1 2610034N03Rik isochorismatase domain containing 1 protein-coding common_peak1_44_244_0.189540698562061_8.0314082882836_0.810024790325347 chr8 82402087 82403126 + 0.810024790325347 NA promoter-TSS (NM_008357) promoter-TSS (NM_008357) -20 NM_008357 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding unique_peak2_44_244_0.189540698562061_8.0314082882836_0.810024790325347 chr8 70072079 70073627 + 0.810024790325347 NA promoter-TSS (NM_181540) promoter-TSS (NM_181540) -71 NM_001293795 107770 Mm.37974 NM_181540 ENSMUSG00000036151 Tm6sf2 - transmembrane 6 superfamily member 2 protein-coding common_peak2_44_244_0.189540698562061_8.0314082882836_0.810024790325347 chr1 87899295 87900943 + 0.810024790325347 NA intron (NM_177646, intron 3 of 29) intron (NM_177646, intron 3 of 29) 46832 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak2_85_673_-0.124265299741554_9.33447213131108_0.809991459539714 chr2 26492382 26495189 + 0.809991459539714 NA intron (NM_008714, intron 2 of 33) intron (NM_008714, intron 2 of 33) 10037 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak1_66_410_0.14754911646804_8.7567691419157_0.809610022021637 chr3 65665833 65666539 + 0.809610022021637 NA promoter-TSS (NM_001037923) promoter-TSS (NM_001037923) -42 NM_001037923 624866 Mm.296317 NM_001037923 ENSMUSG00000074579 Lekr1 EG546798|EG624866|Gm6534 leucine, glutamate and lysine rich 1 protein-coding common_peak1_42_230_0.193978128837894_7.948738105835_0.80957406307085 chr17 23546526 23547375 + 0.80957406307085 NA Intergenic CpG -3849 NR_126485 320020 Mm.445111 NR_126484 6330415G19Rik - RIKEN cDNA 6330415G19 gene ncRNA common_peak1_42_230_0.193978128837894_7.948738105835_0.80957406307085-2 chr2 76672319 76673139 + 0.80957406307085 NA intron (NM_010222, intron 1 of 3) intron (NM_010222, intron 1 of 3) 369 NM_010222 14231 Mm.24720 NM_010222 ENSMUSG00000002732 Fkbp7 23kDa|FKBP-7|FKBP23 FK506 binding protein 7 protein-coding common_peak2_217_1841_0.0712972006246559_10.8827059464037_0.809216236644027 chr16 58521787 58524328 + 0.809216236644027 NA intron (NM_018784, intron 1 of 10) CpG 255 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding common_peak1_75_582_-0.133763247430894_9.12047044948505_0.808665025639964 chr16 4963533 4964377 + 0.808665025639964 NA promoter-TSS (NM_001271586) promoter-TSS (NM_001271586) 282 NM_028301 72615 Mm.290628 NM_028301 ENSMUSG00000022515 Anks3 2700067D09Rik|C81345|mKIAA1977 ankyrin repeat and sterile alpha motif domain containing 3 protein-coding common_peak2_518_5771_-0.0415105368453652_12.4741003160685_0.808067729146599 chr6 57821913 57825919 + 0.808067729146599 NA intron (NM_146168, intron 1 of 4) (GGAGAA)n|Simple_repeat|Simple_repeat 1209 NM_146168 232023 Mm.24642 NM_146168 ENSMUSG00000037788 Vopp1 AW146242|Ecop vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding common_peak1_54_399_-0.16256517138881_8.56257360408032_0.807967849787104 chr10 93589022 93589698 + 0.807967849787104 NA promoter-TSS (NR_045810) promoter-TSS (NR_045810) -53 NR_045810 74454 Mm.410794 NR_045810 ENSMUSG00000097407 4933408J17Rik - RIKEN cDNA 4933408J17 gene ncRNA common_peak2_54_399_-0.16256517138881_8.56257360408032_0.807967849787104-2 chr7 137475101 137477399 + 0.807967849787104 NA Intergenic RLTR1B-int|LTR|ERV1 38576 NR_033611 620016 Mm.388932 NR_033611 ENSMUSG00000100863 Gm12669 OTTMUSG00000007920 glutaredoxin 3 pseudogene pseudo common_peak1_54_399_-0.16256517138881_8.56257360408032_0.807967849787104-2 chr11 68464221 68465385 + 0.807967849787104 NA intron (NM_177320, intron 1 of 18) URR1B|DNA|hAT-Charlie 32678 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak2_54_399_-0.16256517138881_8.56257360408032_0.807967849787104 chr7 6285481 6286918 + 0.807967849787104 NA promoter-TSS (NM_001024928) promoter-TSS (NM_001024928) -381 NM_001024928 384763 Mm.276279 NM_001024928 ENSMUSG00000054893 Zfp667 A830025F02Rik|Mip1|ZNF667 zinc finger protein 667 protein-coding common_peak1_71_450_0.140926360989999_8.88744680375038_0.807762172724983 chr9 108093755 108094745 + 0.807762172724983 NA exon (NM_146226, exon 2 of 22) exon (NM_146226, exon 2 of 22) 230 NM_146226 235606 Mm.219639 NM_146226 ENSMUSG00000032590 Apeh - acylpeptide hydrolase protein-coding common_peak1_134_1147_-0.0945937729577722_10.1176100401968_0.807730432305887 chr16 91688099 91689417 + 0.807730432305887 NA promoter-TSS (NM_021720) promoter-TSS (NM_021720) -30 NM_021720 60364 Mm.328698 NM_021720 ENSMUSG00000022960 Donson 1110025J21Rik|AI845729|ORF60 downstream neighbor of SON protein-coding common_peak1_57_340_0.161647696674752_8.49445177736155_0.807578533463771 chr11 119602619 119603589 + 0.807578533463771 NA 5' UTR (NM_001306081, exon 1 of 33) 5' UTR (NM_001306081, exon 1 of 33) 199 NM_028898 74370 Mm.209933 NM_028898 ENSMUSG00000025583 Rptor 4932417H02Rik|Rap|Raptor|mKIAA1303 regulatory associated protein of MTOR, complex 1 protein-coding common_peak2_171_1366_0.082154265020602_10.4578746601164_0.807571052951913 chr10 76441558 76443550 + 0.807571052951913 NA intron (NM_008787, intron 1 of 41) CpG 358 NM_008787 18541 Mm.251794 NM_008787 ENSMUSG00000001151 Pcnt AW476095|C86676|KEN|Pcnt2|kendrin|m239Asp|m275Asp pericentrin (kendrin) protein-coding common_peak2_29_143_0.238731431155391_7.28929071702001_0.807410978262193 chr10 96200760 96201641 + 0.807410978262193 NA Intergenic Intergenic -25007 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_29_143_0.238731431155391_7.28929071702001_0.807410978262193 chr10 7212006 7212465 + 0.807410978262193 NA promoter-TSS (NM_172546) promoter-TSS (NM_172546) 2 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak1_114_820_0.105327979194024_9.73390240137482_0.807227344754544 chr12 100110117 100111032 + 0.807227344754544 NA Intergenic Intergenic -1757 NM_008947 19179 Mm.157105 NM_008947 ENSMUSG00000021178 Psmc1 AI325227|P26s4|Rpt2/S4|S4|rpt2 protease (prosome, macropain) 26S subunit, ATPase 1 protein-coding common_peak1_129_959_0.0966362359107347_9.95520871356388_0.806712334907619 chr19 55315483 55316943 + 0.806712334907619 NA promoter-TSS (NM_025883) promoter-TSS (NM_025883) 156 NM_001293686 53611 Mm.258637 NM_016862 ENSMUSG00000024983 Vti1a 1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2 vesicle transport through interaction with t-SNAREs 1A protein-coding common_peak1_119_998_-0.102459812822001_9.91311096138142_0.806457704857072 chr1 172082036 172083388 + 0.806457704857072 NA promoter-TSS (NM_021607) promoter-TSS (NM_021607) 37 NM_021607 59287 Mm.218203 NM_021607 ENSMUSG00000003458 Ncstn 9430068N19Rik|AA727311|Aph2|D1Dau13e|Kiaa0253|Nct|mKIAA0253 nicastrin protein-coding common_peak2_123_903_0.0997278646918307_9.8700428947611_0.806419653218318 chr7 56049432 56051244 + 0.806419653218318 NA intron (NM_010418, intron 1 of 92) CpG 183 NM_010418 15204 Mm.20929 NM_010418 ENSMUSG00000030451 Herc2 D15F32S1h|D7H15F32S1|D7H15F37S1|jdf2|mKIAA0393|rjs HECT and RLD domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak1_52_382_-0.165458816481845_8.49847117368403_0.806175785490959 chr10 19099927 19100986 + 0.806175785490959 NA Intergenic MamRep605|LTR?|LTR? -41293 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_24_112_0.265836229721196_6.95309707727579_0.806162152839507 chr2 181863761 181864200 + 0.806162152839507 NA promoter-TSS (NM_025901) promoter-TSS (NM_025901) -380 NM_025901 67005 Mm.271986 NM_025901 ENSMUSG00000038628 Polr3k 12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11 polymerase (RNA) III (DNA directed) polypeptide K protein-coding common_peak2_157_1383_-0.085916825337053_10.3916698149682_0.805462910290122 chrX 152232232 152234718 + 0.805462910290122 NA 5' UTR (NM_013668, exon 1 of 26) 5' UTR (NM_013668, exon 1 of 26) 248 NM_013668 20591 Mm.142655 NM_013668 ENSMUSG00000025332 Kdm5c D930009K15Rik|Jarid1c|Smcx|mKIAA0234 lysine (K)-specific demethylase 5C protein-coding common_peak1_195_1789_-0.0756430128682215_10.7679223657175_0.805355648441938 chr17 33954883 33956599 + 0.805355648441938 NA promoter-TSS (NM_172620) promoter-TSS (NM_172620) -100 NM_011296 20084 Mm.298745 NM_011296 ENSMUSG00000008668 Rps18 H-2Ke3|H2-Ke3|Ke-3|ke3 ribosomal protein S18 protein-coding common_peak2_64_395_0.147557900253286_8.70313557020625_0.805337306293297 chr13 97240330 97242321 + 0.805337306293297 NA 5' UTR (NM_007930, exon 1 of 3) 5' UTR (NM_007930, exon 1 of 3) 220 NM_007930 13803 Mm.241073 NM_007930 ENSMUSG00000041773 Enc1 Nrpb|PIG10 ectodermal-neural cortex 1 protein-coding common_peak2_145_1111_0.0899902648484794_10.1639362051477_0.805331894718178 chr14 67714686 67717008 + 0.805331894718178 NA promoter-TSS (NM_134073) promoter-TSS (NM_134073) -6 NM_175384 108912 Mm.33831 NM_175384 ENSMUSG00000048922 Cdca2 2610311M19Rik|AI586158 cell division cycle associated 2 protein-coding common_peak2_144_1249_-0.0909434781585592_10.2422406404702_0.805218337821561 chr16 32331700 32333543 + 0.805218337821561 NA intron (NM_177633, intron 1 of 10) CpG 369 NM_177633 224111 Mm.31275 NM_177633 ENSMUSG00000053774 Ubxn7 A630090P18|AI196514|Ubxd7|mKIAA0794 UBX domain protein 7 protein-coding common_peak1_15_61_0.342056952738293_6.12522478675602_0.804964541269708-3 chr12 73632231 73632641 + 0.804964541269708 NA intron (NM_001313977, intron 2 of 14) intron (NM_001313977, intron 2 of 14) 47640 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_15_61_0.342056952738293_6.12522478675602_0.804964541269708 chr1 119913283 119913696 + 0.804964541269708 NA promoter-TSS (NM_175106) promoter-TSS (NM_175106) -321 NM_175106 66343 Mm.49942 NM_175106 ENSMUSG00000036975 Tmem177 2300008B03Rik transmembrane protein 177 protein-coding common_peak1_15_61_0.342056952738293_6.12522478675602_0.804964541269708-2 chr10 12804828 12805235 + 0.804964541269708 NA intron (NM_011682, intron 1 of 73) RMER6A|LTR|ERVK 56704 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding common_peak1_12_79_-0.393119161432786_6.12536851417097_0.804964541269695 chr10 44537758 44538142 + 0.804964541269695 NA Intergenic Intergenic -79202 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding unique_peak2_12_79_-0.393119161432786_6.12536851417097_0.804964541269695-2 chr2 71816265 71817018 + 0.804964541269695 NA exon (NM_008397, exon 2 of 26) exon (NM_008397, exon 2 of 26) 29702 NM_001277970 16403 Mm.225096 NM_008397 ENSMUSG00000027111 Itga6 5033401O05Rik|AI115430|Cd49f|VLA-6 integrin alpha 6 protein-coding unique_peak2_12_79_-0.393119161432786_6.12536851417097_0.804964541269695 chr15 38635323 38635957 + 0.804964541269695 NA Intergenic B1_Mur1|SINE|Alu -26264 NM_025494 66335 Mm.276618 NM_025494 ENSMUSG00000022295 Atp6v1c1 1700025B18Rik|U13839 ATPase, H+ transporting, lysosomal V1 subunit C1 protein-coding common_peak1_61_459_-0.152195535023713_8.76939228343252_0.80494534101212-2 chr8 69144335 69145371 + 0.80494534101212 NA Intergenic PB1D10|SINE|Alu -3900 NM_199364 211134 Mm.409446 NM_199364 ENSMUSG00000036306 Lzts1 F37|FEZ1|PSD-Zip70 leucine zipper, putative tumor suppressor 1 protein-coding common_peak2_61_459_-0.152195535023713_8.76939228343252_0.80494534101212 chr4 156200174 156201741 + 0.80494534101212 NA promoter-TSS (NM_015783) promoter-TSS (NM_015783) -139 NM_015783 100038882 Mm.4950 NM_015783 ENSMUSG00000035692 Isg15 G1p2|IGI15|IP17|Irfp|UCRP ISG15 ubiquitin-like modifier protein-coding common_peak1_61_459_-0.152195535023713_8.76939228343252_0.80494534101212 chr10 80589513 80590346 + 0.80494534101212 NA intron (NM_145421, intron 1 of 4) intron (NM_145421, intron 1 of 4) 412 NM_145421 216169 Mm.29802 NM_145421 ENSMUSG00000003346 Abhd17a 1700013O15Rik|BC005632|D10Bwg1364e|Fam108a abhydrolase domain containing 17A protein-coding common_peak2_55_325_0.164448906973204_8.43095260771768_0.804842239852346 chr4 63544706 63545581 + 0.804842239852346 NA intron (NM_024173, intron 1 of 2) CpG 378 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding common_peak1_73_564_-0.135711094904783_9.07425150985016_0.804798934536718 chr11 49081342 49082597 + 0.804798934536718 NA intron (NM_001271677, intron 1 of 2) intron (NM_001271677, intron 1 of 2) -5048 NM_001271676 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_34_237_-0.21337204878441_7.78813173891574_0.804544547669451 chr1 92514771 92515990 + 0.804544547669451 NA intron (NM_147039, intron 1 of 1) intron (NM_147039, intron 1 of 1) 3135 NM_147039 259041 Mm.223424 NM_147039 ENSMUSG00000042849 Olfr1414 MOR103-2 olfactory receptor 1414 protein-coding common_peak1_34_237_-0.21337204878441_7.78813173891574_0.804544547669451 chr10 83153425 83154119 + 0.804544547669451 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 168275 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak2_154_1352_-0.0871583323639094_10.3583669577946_0.804197606633355 chr6 42264209 42266690 + 0.804197606633355 NA TTS (NM_175408) TTS (NM_175408) 464 NM_007610 12366 Mm.3921 NM_007610 ENSMUSG00000029863 Casp2 CASP-2|ICH-1|NEDD-2|Nedd2 caspase 2 protein-coding common_peak1_103_722_0.110794030062527_9.55324885198238_0.804079759956004 chr8 119394450 119395736 + 0.804079759956004 NA exon (NM_019966, exon 1 of 5) exon (NM_019966, exon 1 of 5) 201 NM_019966 56690 Mm.423037 NM_019966 ENSMUSG00000074064 Mlycd AI324784|Mcd malonyl-CoA decarboxylase protein-coding common_peak1_84_558_0.124937375009301_9.18917316034784_0.803906932118017 chr1 133158832 133159817 + 0.803906932118017 NA Intergenic Intergenic 28158 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding common_peak2_84_558_0.124937375009301_9.18917316034784_0.803906932118017 chr1 91539630 91541531 + 0.803906932118017 NA promoter-TSS (NM_001039126) promoter-TSS (NM_001039126) 15 NM_001039126 65247 Mm.234152 NM_023046 ENSMUSG00000026311 Asb1 1700029O08Rik|1700054C17Rik|AI426616|AI851378|mKIAA1146 ankyrin repeat and SOCS box-containing 1 protein-coding common_peak1_19_126_-0.297550459141389_6.83990945720147_0.803496376327027 chr13 51781743 51782216 + 0.803496376327027 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 11768 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_19_126_-0.297550459141389_6.83990945720147_0.803496376327027-3 chr9 124051320 124051710 + 0.803496376327027 NA Intergenic (TTTG)n|Simple_repeat|Simple_repeat 29544 NM_009914 12771 Mm.57050 NM_009914 ENSMUSG00000035448 Ccr3 CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3 chemokine (C-C motif) receptor 3 protein-coding common_peak1_19_126_-0.297550459141389_6.83990945720147_0.803496376327027-2 chr7 80777607 80778117 + 0.803496376327027 NA intron (NM_016721, intron 2 of 37) MT2B2|LTR|ERVL 25469 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_19_126_-0.297550459141389_6.83990945720147_0.803496376327027-4 chrX 99136200 99136731 + 0.803496376327027 NA 5' UTR (NM_010110, exon 1 of 5) 5' UTR (NM_010110, exon 1 of 5) 404 NM_010110 13641 Mm.3374 NM_010110 ENSMUSG00000031217 Efnb1 Cek5-L|EFL-3|Elk-L|Epl2|Eplg2|LERK-2|Lerk2|Stra1 ephrin B1 protein-coding common_peak1_16_106_-0.337930725426975_6.57250162368766_0.803416426948883 chr6 108550628 108550990 + 0.803416426948883 NA 3' UTR (NM_010585, exon 62 of 62) 3' UTR (NM_010585, exon 62 of 62) 61066 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA unique_peak2_16_106_-0.337930725426975_6.57250162368766_0.803416426948883 chr4 99715513 99716175 + 0.803416426948883 NA intron (NM_001081264, intron 1 of 14) CpG 214 NM_001081264 320438 Mm.32408 NM_001081264 ENSMUSG00000073792 Alg6 E230028F23Rik asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) protein-coding common_peak1_135_1157_-0.0940463434559948_10.1303963662612_0.803208795143417 chr11 5881792 5883671 + 0.803208795143417 NA Intergenic Intergenic -4475 NM_008894 18972 Mm.35788 NM_008894 ENSMUSG00000020471 Pold2 50kDa|p50|po1D2 polymerase (DNA directed), delta 2, regulatory subunit protein-coding common_peak2_152_1179_0.087234149031536_10.248188218765_0.803145388911152 chr1 34483887 34486477 + 0.803145388911152 NA Intergenic L1MA6|LINE|L1 -13248 NM_009355 21755 Mm.10725 NM_009355 ENSMUSG00000026125 Prss39 Tesp1 protease, serine 39 protein-coding common_peak2_108_890_-0.107539385992286_9.74551192852578_0.803098073354295 chr14 57797332 57799329 + 0.803098073354295 NA promoter-TSS (NR_037238) promoter-TSS (NR_037238) -94 NR_037238 100526476 NR_037238 ENSMUSG00000092784 Mir3077 mir-3077|mmu-mir-3077 microRNA 3077 ncRNA common_peak2_22_148_-0.280707716368651_7.07881466227784_0.802543579138544 chr4 70248927 70249507 + 0.802543579138544 NA intron (NM_001313762, intron 25 of 33) CpG 161218 NM_001313762 214444 Mm.370777 NM_145990 ENSMUSG00000039298 Cdk5rap2 2900018K03Rik|an|mKIAA1633 CDK5 regulatory subunit associated protein 2 protein-coding common_peak1_22_148_-0.280707716368651_7.07881466227784_0.802543579138544-2 chr12 32163979 32164482 + 0.802543579138544 NA Intergenic Intergenic 44108 NM_001146201 30955 Mm.101369 NM_020272 ENSMUSG00000020573 Pik3cg 5830428L06Rik|PI3Kgamma|p110gamma phosphoinositide-3-kinase, catalytic, gamma polypeptide protein-coding common_peak1_22_148_-0.280707716368651_7.07881466227784_0.802543579138544 chr11 11704637 11705209 + 0.802543579138544 NA intron (NM_001301866, intron 2 of 5) intron (NM_001301866, intron 2 of 5) 14746 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding unique_peak2_21_94_0.289942134363003_6.71482667551245_0.802422179671239 chr11 59082831 59083770 + 0.802422179671239 NA intron (NM_001171512, intron 18 of 103) intron (NM_001171512, intron 18 of 103) 53075 NM_001171512 380698 Mm.339542 NM_199152 ENSMUSG00000061462 Obscn BC046431|Gm878|OTTMUSG00000005786|UNC89 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF protein-coding common_peak2_21_94_0.289942134363003_6.71482667551245_0.802422179671239-2 chr3 47482181 47482740 + 0.802422179671239 NA Intergenic MMVL30-int|LTR|ERV1 544299 NR_040408 666202 Mm.465057 NR_040408 ENSMUSG00000103257 Gm7977 EG666202 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide pseudogene pseudo common_peak1_21_94_0.289942134363003_6.71482667551245_0.802422179671239-3 chr17 23924366 23924890 + 0.802422179671239 NA Intergenic CpG 7170 NM_001077633 620253 Mm.390964 NM_001077633 ENSMUSG00000057417 Dcpp3 Dcpp-3|EG620253|SPT-3 demilune cell and parotid protein 3 protein-coding common_peak1_21_94_0.289942134363003_6.71482667551245_0.802422179671239 chr12 16530703 16531292 + 0.802422179671239 NA Intergenic Intergenic 58773 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak1_21_94_0.289942134363003_6.71482667551245_0.802422179671239-2 chr14 66260074 66260611 + 0.802422179671239 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) 20710 NM_172498 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_21_94_0.289942134363003_6.71482667551245_0.802422179671239 chr13 44580353 44581214 + 0.802422179671239 NA Intergenic Intergenic 141056 NR_045489 69491 Mm.392410 NR_045489 ENSMUSG00000098144 1700029N11Rik - RIKEN cDNA 1700029N11 gene ncRNA common_peak2_31_156_0.228244825419897_7.40874316160158_0.802313504101548 chr10 117417003 117418210 + 0.802313504101548 NA Intergenic Intergenic -40633 NM_001310609 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding unique_peak2_27_184_-0.244816710498386_7.40897310526712_0.802313504101548 chr10 45048122 45049377 + 0.802313504101548 NA Intergenic Intergenic -18465 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak1_31_156_0.228244825419897_7.40874316160158_0.802313504101548 chr13 52827673 52828318 + 0.802313504101548 NA Intergenic L1M4|LINE|L1 -70790 NR_027893 105404 Mm.184173 NR_027893 BB123696 - expressed sequence BB123696 ncRNA common_peak1_168_1498_-0.0819708194184496_10.5087992582386_0.80215930526819 chr6 148211227 148212833 + 0.80215930526819 NA promoter-TSS (NR_015615) promoter-TSS (NR_015615) -258 NR_015615 320737 Mm.137858 NR_015615 4732416N19Rik - RIKEN cDNA 4732416N19 gene ncRNA common_peak1_81_636_-0.127093986004517_9.25160256925404_0.801570538145743 chr8 122550621 122551895 + 0.801570538145743 NA promoter-TSS (NM_001037298) promoter-TSS (NM_001037298) 71 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak1_38_268_-0.198518912948763_7.97220290608224_0.80145724587184-2 chr7 72268840 72269665 + 0.80145724587184 NA intron (NM_001024703, intron 1 of 22) intron (NM_001024703, intron 1 of 22) 37343 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak1_38_268_-0.198518912948763_7.97220290608224_0.80145724587184 chr1 130715636 130716666 + 0.80145724587184 NA promoter-TSS (NR_027859) promoter-TSS (NR_027859) -330 NM_008825 18640 Mm.249861 NM_008825 ENSMUSG00000026409 Pfkfb2 4930568D07Rik 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 protein-coding unique_peak2_38_268_-0.198518912948763_7.97220290608224_0.80145724587184 chr9 109832277 109833538 + 0.80145724587184 NA intron (NM_018757, intron 1 of 6) intron (NM_018757, intron 1 of 6) 113 NM_018757 54369 Mm.12951 NM_018757 ENSMUSG00000032478 Nme6 nm23-M6 NME/NM23 nucleoside diphosphate kinase 6 protein-coding common_peak2_36_253_-0.208901035560755_7.88423416899179_0.801380014109632 chrX 98258948 98260829 + 0.801380014109632 NA intron (NM_013476, intron 2 of 7) intron (NM_013476, intron 2 of 7) 111131 NM_013476 11835 Mm.39005 NM_013476 ENSMUSG00000046532 Ar AW320017|Tfm androgen receptor protein-coding common_peak1_36_253_-0.208901035560755_7.88423416899179_0.801380014109632 chr4 134703011 134703704 + 0.801380014109632 NA exon (NM_207237, exon 1 of 12) exon (NM_207237, exon 1 of 12) 933 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak1_18_77_0.314961984534642_6.44288321112957_0.801324102131202-3 chr13 53015807 53016344 + 0.801324102131202 NA Intergenic Intergenic -35036 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_18_77_0.314961984534642_6.44288321112957_0.801324102131202-2 chr10 17795593 17796097 + 0.801324102131202 NA promoter-TSS (NM_138628) promoter-TSS (NM_138628) -374 NM_138628 378431 Mm.283493 NM_138628 ENSMUSG00000039891 Txlnb 2310001N14Rik|Mdp77 taxilin beta protein-coding common_peak2_18_77_0.314961984534642_6.44288321112957_0.801324102131202 chr7 83648913 83649782 + 0.801324102131202 NA intron (NM_010551, intron 15 of 18) intron (NM_010551, intron 15 of 18) 17330 NM_023377 170460 Mm.357953 NM_023377 ENSMUSG00000046027 Stard5 2310058G22Rik|AI607880|D7Ertd152e StAR-related lipid transfer (START) domain containing 5 protein-coding common_peak1_18_77_0.314961984534642_6.44288321112957_0.801324102131202 chr1 160396796 160397255 + 0.801324102131202 NA intron (NM_013862, intron 17 of 20) L1_Mus3|LINE|L1 -45454 NM_001038621 29809 Mm.25833 NM_013862 ENSMUSG00000026721 Rabgap1l 5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471 RAB GTPase activating protein 1-like protein-coding common_peak1_71_546_-0.137487038547178_9.02665350351897_0.801089901577704 chr3 58516473 58517447 + 0.801089901577704 NA Intergenic Intergenic -8861 NM_001005509 229317 Mm.21617 NM_001005509 ENSMUSG00000027810 Eif2a D030048D22|D3Ertd194e eukaryotic translation initiation factor 2A protein-coding common_peak2_71_546_-0.137487038547178_9.02665350351897_0.801089901577704 chr8 121569475 121571444 + 0.801089901577704 NA intron (NM_133765, intron 1 of 8) intron (NM_133765, intron 1 of 8) 8347 NM_133765 76454 Mm.24829 NM_133765 ENSMUSG00000052934 Fbxo31 1110003O08Rik|2310046N15Rik|Fbx14|Fbxo14 F-box protein 31 protein-coding common_peak1_44_316_-0.182160392574776_8.21725883385202_0.800973627994954 chr17 56672465 56673088 + 0.800973627994954 NA promoter-TSS (NM_001252467) promoter-TSS (NM_001252467) -449 NM_001252466 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding common_peak2_251_2210_0.0643504725082664_11.1426585460704_0.80067429255599 chr10 7680175 7682255 + 0.80067429255599 NA promoter-TSS (NR_033219) promoter-TSS (NR_033219) 6 NM_010690 16798 Mm.34083 NM_010690 ENSMUSG00000040021 Lats1 AW208599 large tumor suppressor protein-coding common_peak2_215_2009_-0.0709352856676286_10.9375121432325_0.800633726267589 chr1 160211820 160214068 + 0.800633726267589 NA promoter-TSS (NM_009786) promoter-TSS (NM_009786) -52 NM_009786 12301 Mm.10702 NM_009786 ENSMUSG00000014226 Cacybp SIP calcyclin binding protein protein-coding common_peak1_40_284_-0.193374843986679_8.05813068705877_0.800461273600126 chr13 24620583 24621495 + 0.800461273600126 NA intron (NM_178658, intron 1 of 13) G-rich|Low_complexity|Low_complexity 6433 NM_178658 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak2_40_284_-0.193374843986679_8.05813068705877_0.800461273600126-2 chr12 101896232 101897392 + 0.800461273600126 NA intron (NM_028446, intron 4 of 20) intron (NM_028446, intron 4 of 20) 16359 NM_028446 109181 Mm.208618 NM_028446 ENSMUSG00000021188 Trip11 2610511G22Rik|3110031G15Rik|6030460N08Rik|AI450776|GMAP-210|TRIP230 thyroid hormone receptor interactor 11 protein-coding common_peak2_40_284_-0.193374843986679_8.05813068705877_0.800461273600126 chr11 87638664 87639701 + 0.800461273600126 NA intron (NM_001045527, intron 5 of 5) intron (NM_001045527, intron 5 of 5) 22018 NM_001045527 327992 Mm.390371 NM_001045527 ENSMUSG00000070345 Hsf5 Gm739|MLZ-220 heat shock transcription factor family member 5 protein-coding common_peak1_42_300_-0.187892506505751_8.13967342350683_0.800346013078331 chrX 122831293 122831555 + 0.800346013078331 NA Intergenic (CATTC)n|Simple_repeat|Simple_repeat -272099 NM_001310652 73061 Mm.292979 NM_028426 ENSMUSG00000079450 Cldn34c1 3110007F17Rik claudin 34C1 protein-coding common_peak1_100_813_-0.11203679066079_9.61286658893585_0.800341260029621 chr16 92797985 92799343 + 0.800341260029621 NA intron (NM_001111022, intron 2 of 6) Tigger7|DNA|TcMar-Tigger 27410 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_143_1092_0.0904446097598299_10.1392999905518_0.800091375286552 chr3 105814455 105817009 + 0.800091375286552 NA intron (NR_045845, intron 1 of 2) intron (NR_045845, intron 1 of 2) 165 NR_045845 433637 Mm.331285 NR_045845 ENSMUSG00000104835 Gm5547 EG433637 predicted gene 5547 ncRNA common_peak2_179_1615_-0.0788082228144518_10.6188073713446_0.799942515062613 chr3 158030830 158032831 + 0.799942515062613 NA promoter-TSS (NM_001093753) promoter-TSS (NM_001093753) -76 NM_001093753 69207 Mm.223946 NM_026989 ENSMUSG00000055436 Srsf11 0610009J05Rik|2610019N13Rik|BF642805|Sfrs11 serine/arginine-rich splicing factor 11 protein-coding common_peak1_490_5085_0.0428861927936897_12.333758843087_0.799872979422725 chr19 5800993 5804499 + 0.799872979422725 NA promoter-TSS (NR_002847) promoter-TSS (NR_002847) -75 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_284_2579_0.0594489561178797_11.3628798283696_0.799828891329888 chr15 73136006 73141640 + 0.799828891329888 NA intron (NM_153178, intron 2 of 18) intron (NM_153178, intron 2 of 18) 46124 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_82_541_0.127356827814477_9.14582745526111_0.799698010348212-3 chr4 133369743 133370458 + 0.799698010348212 NA TTS (NR_039582) TTS (NR_039582) 324 NR_039582 100628620 NR_039582 ENSMUSG00000092745 Mir5122 mmu-mir-5122|mu-mir-5122 microRNA 5122 ncRNA common_peak1_82_541_0.127356827814477_9.14582745526111_0.799698010348212-2 chr13 55512724 55513799 + 0.799698010348212 NA intron (NR_104287, intron 1 of 8) CpG 185 NM_026131 67399 Mm.275648 NM_026131 ENSMUSG00000021493 Pdlim7 LMP PDZ and LIM domain 7 protein-coding common_peak1_82_541_0.127356827814477_9.14582745526111_0.799698010348212 chr11 35837857 35839168 + 0.799698010348212 NA TTS (NM_170779) TTS (NM_170779) -3984 NM_025936 104458 Mm.284906 NM_025936 ENSMUSG00000018848 Rars 2610011N19Rik|2610037E21Rik|AL033339|AW985894 arginyl-tRNA synthetase protein-coding common_peak1_101_704_0.112803641027657_9.51788126779998_0.799443368593415 chr9 21436464 21437312 + 0.799443368593415 NA intron (NM_007871, intron 1 of 19) B1_Mus2|SINE|Alu 11980 NM_001039520 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding common_peak1_33_169_0.220757636022825_7.51976975414911_0.799153575322224 chr11 72952584 72953365 + 0.799153575322224 NA Intergenic Intergenic -8195 NM_016745 53313 Mm.6306 NM_016745 ENSMUSG00000020788 Atp2a3 SERCA3b|Serca3 ATPase, Ca++ transporting, ubiquitous protein-coding common_peak1_33_169_0.220757636022825_7.51976975414911_0.799153575322224-2 chr11 101252932 101253518 + 0.799153575322224 NA promoter-TSS (NM_026776) promoter-TSS (NM_026776) -482 NM_001284412 28084 Mm.301020 NM_026776 ENSMUSG00000078656 Vps25 1110020N13Rik|AW107467|D11Wsu68e vacuolar protein sorting 25 protein-coding common_peak2_33_169_0.220757636022825_7.51976975414911_0.799153575322224 chr12 79089099 79090039 + 0.799153575322224 NA exon (NM_029988, exon 1 of 4) exon (NM_029988, exon 1 of 4) 101 NM_029988 110417 Mm.268317 NM_029988 ENSMUSG00000021120 Pigh 2210416H01Rik|A930028P05Rik phosphatidylinositol glycan anchor biosynthesis, class H protein-coding common_peak1_465_4765_0.0441606358699342_12.2406435541252_0.799126526628584 chr2 75702589 75705395 + 0.799126526628584 NA intron (NR_132727, intron 1 of 1) CpG 671 NR_132727 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak2_51_296_0.167714435026522_8.29817633831403_0.799047496723998 chr9 124142451 124143806 + 0.799047496723998 NA Intergenic Intergenic 21585 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak2_90_609_0.119679610269799_9.31250523758515_0.798979436667351 chr11 61174144 61175971 + 0.798979436667351 NA promoter-TSS (NM_001004143) promoter-TSS (NM_001004143) 2 NM_001004143 216825 Mm.30602 NM_001004143 ENSMUSG00000042506 Usp22 AI427806 ubiquitin specific peptidase 22 protein-coding unique_peak2_26_124_0.256423282177508_7.09399592575084_0.798859123350393 chr14 31367633 31368656 + 0.798859123350393 NA exon (NM_009796, exon 17 of 21) exon (NM_009796, exon 17 of 21) 31420 NM_009796 12339 Mm.201535 NM_009796 ENSMUSG00000021893 Capn7 AU022319|PalBH calpain 7 protein-coding common_peak2_26_124_0.256423282177508_7.09399592575084_0.798859123350393-2 chr5 113160916 113161744 + 0.798859123350393 NA intron (NM_172884, intron 1 of 7) intron (NM_172884, intron 1 of 7) 1983 NM_172884 243219 Mm.160131 NM_172884 ENSMUSG00000051339 2900026A02Rik 8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671 RIKEN cDNA 2900026A02 gene protein-coding common_peak1_26_124_0.256423282177508_7.09399592575084_0.798859123350393 chr17 5327532 5327983 + 0.798859123350393 NA exon (NM_001085355, exon 15 of 20) exon (NM_001085355, exon 15 of 20) 91010 NM_175349 106557 Mm.432764 NM_175349 ENSMUSG00000101959 Ldhal6b 4933402O15Rik|AI326310|LDHL|Ldhal lactate dehydrogenase A-like 6B protein-coding common_peak2_26_124_0.256423282177508_7.09399592575084_0.798859123350393 chr10 61252759 61253843 + 0.798859123350393 NA intron (NM_001081127, intron 2 of 21) RLTR11D|LTR|ERVK 20137 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak2_60_364_0.152766797279593_8.58813605240718_0.798741554715664 chr3 63928655 63929623 + 0.798741554715664 NA intron (NM_177856, intron 1 of 4) CpG 246 NM_177856 329659 Mm.39342 NM_177856 ENSMUSG00000048581 E130311K13Rik - RIKEN cDNA E130311K13 gene protein-coding common_peak2_72_459_0.136828975441253_8.913904538665_0.798302617187145 chr19 41335124 41337578 + 0.798302617187145 NA intron (NM_031376, intron 2 of 16) intron (NM_031376, intron 2 of 16) 48719 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding common_peak2_104_731_0.109880392392776_9.57064003448043_0.79812350161295 chr9 55208096 55209743 + 0.79812350161295 NA promoter-TSS (NM_028049) promoter-TSS (NM_028049) -16 NM_028049 71999 Mm.276429 NM_028049 ENSMUSG00000032309 Fbxo22 0610033L19Rik|1600016C16Rik F-box protein 22 protein-coding common_peak1_35_182_0.215597834774981_7.62349875567153_0.797532018175265-2 chr7 4099048 4099876 + 0.797532018175265 NA intron (NR_033568, intron 5 of 8) MTD|LTR|ERVL-MaLR -20068 NM_001109765 57776 Mm.29729 NM_021324 ENSMUSG00000030428 Ttyh1 4930459B04Rik|6330408P11Rik|TTY1|mTTY1|tty tweety family member 1 protein-coding common_peak1_35_182_0.215597834774981_7.62349875567153_0.797532018175265 chr2 128072275 128072918 + 0.797532018175265 NA intron (NM_028765, intron 14 of 17) intron (NM_028765, intron 14 of 17) -53442 NM_207681 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_167_1327_0.0822721460106415_10.4161755043522_0.796970251818153 chr9 56949951 56951825 + 0.796970251818153 NA promoter-TSS (NM_178374) promoter-TSS (NM_178374) -36 NM_178374 66069 Mm.220984 NM_178374 ENSMUSG00000055334 Snupn 0610031A09Rik|Rnut1|Snupn1 snurportin 1 protein-coding common_peak1_93_635_0.11686044332802_9.37131317694837_0.796923708054319 chr2 156547151 156548321 + 0.796923708054319 NA 5' UTR (NM_001164818, exon 1 of 5) 5' UTR (NM_001164818, exon 1 of 5) 160 NM_001164818 68295 Mm.253648 NM_026661 ENSMUSG00000027628 Aar2 0610011L14Rik AAR2 splicing factor homolog protein-coding common_peak1_224_2109_-0.0687430591515952_11.0086557540188_0.796862826066615 chrX 167207909 167210930 + 0.796862826066615 NA promoter-TSS (NM_021278) promoter-TSS (NM_021278) -201 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_121_1017_-0.100390083842367_9.94132680415451_0.796689652216354 chr4 94978425 94979816 + 0.796689652216354 NA promoter-TSS (NM_177239) promoter-TSS (NM_177239) -20 NM_177239 320713 Mm.208868 NM_177239 ENSMUSG00000062627 Mysm1 C130067A03Rik|C530050H10Rik myb-like, SWIRM and MPN domains 1 protein-coding common_peak1_273_2455_0.0608550223510385_11.2925223565457_0.796606489448472 chr2 84714269 84716592 + 0.796606489448472 NA promoter-TSS (NM_144887) promoter-TSS (NM_144887) -266 NM_144887 228136 Mm.288508 NM_144887 ENSMUSG00000034075 Zdhhc5 1110032A17Rik|AI451382|Zisp zinc finger, DHHC domain containing 5 protein-coding common_peak2_379_3695_0.049945371231864_11.876721727032_0.796529563443626 chr1 180810159 180814946 + 0.796529563443626 NA intron (NM_008210, intron 1 of 3) CpG 1053 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a H3.3A H3 histone, family 3A protein-coding unique_peak2_29_199_-0.235199757177021_7.52625631118621_0.796448122818084 chr6 145105803 145107137 + 0.796448122818084 NA Intergenic Intergenic -9166 NM_001281980 16970 Mm.843 NM_008511 ENSMUSG00000030263 Lrmp D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1 lymphoid-restricted membrane protein protein-coding common_peak1_29_199_-0.235199757177021_7.52625631118621_0.796448122818084 chr3 102715113 102715764 + 0.796448122818084 NA Intergenic Intergenic -19332 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding common_peak2_307_2842_0.0567477794682514_11.5015722734117_0.7962809908253 chr5 115010475 115014289 + 0.7962809908253 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 858 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak1_237_2057_0.0666574145320293_11.04035597416_0.796203382251637 chr7 138845579 138847352 + 0.796203382251637 NA promoter-TSS (NM_026391) promoter-TSS (NM_026391) 79 NM_026391 52432 Mm.258739 NM_026391 ENSMUSG00000041769 Ppp2r2d 1300017E19Rik|D7Ertd753e|MDS026 protein phosphatase 2, regulatory subunit B, delta protein-coding common_peak1_191_1744_-0.0753989194458509_10.7313118613741_0.79567000522782 chr3 60408323 60409733 + 0.79567000522782 NA Intergenic Intergenic -63802 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_37_196_0.20492469512687_7.72451416701981_0.79480233059331 chr1 62872190 62873471 + 0.79480233059331 NA Intergenic Intergenic -78098 NR_040601 74992 Mm.401979 NR_040601 4930487H11Rik - RIKEN cDNA 4930487H11 gene ncRNA common_peak2_195_1788_-0.0748368127685115_10.7675192656677_0.794350928744172 chr13 41000107 41001946 + 0.794350928744172 NA promoter-TSS (NM_026550) promoter-TSS (NM_026550) 16 NM_026550 68083 Mm.24789 NM_026550 ENSMUSG00000038683 Pak1ip1 5830431I15Rik|5930415H02Rik|AA419825|AI314040|AW556169|Gdpd1|PIP1 PAK1 interacting protein 1 protein-coding common_peak1_88_592_0.121130074218184_9.2724533316551_0.794282510503236 chr2 148680512 148681679 + 0.794282510503236 NA promoter-TSS (NM_028986) promoter-TSS (NM_028986) -25 NM_028986 74533 Mm.136913 NM_028986 ENSMUSG00000027439 Gzf1 8430437G08Rik|Zfp336|mGZF1 GDNF-inducible zinc finger protein 1 protein-coding common_peak2_24_162_-0.262712962094693_7.21737167318373_0.794245903062008 chr5 148494595 148495390 + 0.794245903062008 NA Intergenic Intergenic 57796 NM_011908 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG ubiquitin-like 3 protein-coding common_peak1_24_162_-0.262712962094693_7.21737167318373_0.794245903062008 chr15 82339687 82340361 + 0.794245903062008 NA Intergenic L2a|LINE|L2 -1155 NM_177391 338368 Mm.444916 NM_177391 ENSMUSG00000049687 Fam109b C920005C14Rik|IPIP27B|Ses2 family with sequence similarity 109, member B protein-coding unique_peak2_24_162_-0.262712962094693_7.21737167318373_0.794245903062008-2 chr9 116476909 116477992 + 0.794245903062008 NA Intergenic ORR1E|LTR|ERVL-MaLR -302087 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding unique_peak2_24_162_-0.262712962094693_7.21737167318373_0.794245903062008 chr17 74353991 74355085 + 0.794245903062008 NA intron (NM_016962, intron 2 of 16) intron (NM_016962, intron 2 of 16) 15551 NM_016962 50850 Mm.19804 NM_016962 ENSMUSG00000024068 Spast Spg4|mKIAA1083 spastin protein-coding common_peak1_70_443_0.138743679496912_8.86378770609856_0.794238468854088-2 chr2 68907666 68908794 + 0.794238468854088 NA intron (NM_172856, intron 1 of 9) RMER15|LTR|ERVL 46673 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak1_70_443_0.138743679496912_8.86378770609856_0.794238468854088 chr10 78457220 78458282 + 0.794238468854088 NA intron (NM_172134, intron 1 of 10) intron (NM_172134, intron 1 of 10) 7197 NM_172134 216134 Mm.206159 NM_172134 ENSMUSG00000032788 Pdxk 2310036D04Rik|AA119688|C77999 pyridoxal (pyridoxine, vitamin B6) kinase protein-coding common_peak1_585_6682_-0.0380741844699557_12.6872430666142_0.793728509462684 chr2 166670933 166675154 + 0.793728509462684 NA intron (NR_105783, intron 2 of 2) intron (NR_105783, intron 2 of 2) 325 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_43_238_0.185543245899559_7.99363843093053_0.793595651098858 chr11 51883949 51884655 + 0.793595651098858 NA Intergenic Intergenic -26821 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak1_43_238_0.185543245899559_7.99363843093053_0.793595651098858-2 chr12 82213885 82214557 + 0.793595651098858 NA intron (NM_001167983, intron 1 of 23) RMER19A|LTR|ERVK 44205 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak1_43_238_0.185543245899559_7.99363843093053_0.793595651098858-3 chr6 88465423 88466014 + 0.793595651098858 NA intron (NM_019685, intron 1 of 10) CpG 295 NM_019685 56505 Mm.42195 NM_019685 ENSMUSG00000030079 Ruvbl1 2510009G06Rik|Pontin52|Tip49a RuvB-like protein 1 protein-coding common_peak1_43_238_0.185543245899559_7.99363843093053_0.793595651098858-4 chr7 66254973 66255728 + 0.793595651098858 NA Intergenic Intergenic 126374 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_39_210_0.196647350109947_7.81942286376216_0.793385962425984 chr5 21784577 21785311 + 0.793385962425984 NA promoter-TSS (NM_011188) promoter-TSS (NM_011188) 221 NM_009584 22791 Mm.266312 NM_009584 ENSMUSG00000029014 Dnajc2 AU020218|MIDA1|Zrf1|Zrf2 DnaJ heat shock protein family (Hsp40) member C2 protein-coding unique_peak2_39_210_0.196647350109947_7.81942286376216_0.793385962425984 chr7 39641875 39643010 + 0.793385962425984 NA Intergenic Intergenic 124676 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak1_175_1407_0.0802030576157229_10.4995331474452_0.793219630146136 chr2 93045148 93046630 + 0.793219630146136 NA intron (NM_001177536, intron 1 of 6) CpG 255 NM_001177536 100042784 Mm.102816 NM_001177536 ENSMUSG00000075028 Prdm11 8030443D09Rik|AA163972|Gm707 PR domain containing 11 protein-coding common_peak1_41_224_0.190305763767817_7.90893407310095_0.793044977220986 chr11 117330795 117331638 + 0.793044977220986 NA promoter-TSS (NM_017380) promoter-TSS (NM_017380) -499 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak2_102_714_0.109748452110987_9.53667365772124_0.79273181482533 chr5 92137157 92138821 + 0.79273181482533 NA promoter-TSS (NM_019490) promoter-TSS (NM_019490) 51 NM_019490 56041 Mm.15868 NM_019490 ENSMUSG00000029407 Uso1 115kDa|TAP|Vdp USO1 vesicle docking factor protein-coding common_peak2_31_214_-0.225327275277937_7.63552921195049_0.792532515082371 chr9 32740220 32741996 + 0.792532515082371 NA intron (NM_011808, intron 6 of 7) intron (NM_011808, intron 6 of 7) 45066 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_357_3684_-0.0512920073733074_11.8218029002958_0.792456205261262 chr11 32532127 32535921 + 0.792456205261262 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 758 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_296_2716_0.0577901297454737_11.4366939150947_0.792386471282031 chr3 105798045 105802569 + 0.792386471282031 NA intron (NM_145541, intron 1 of 7) intron (NM_145541, intron 1 of 7) 1074 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein-1a protein-coding common_peak1_278_2729_-0.0597339987663403_11.384818236424_0.792366366431012 chr9 123923753 123926290 + 0.792366366431012 NA Intergenic CpG 43671 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding common_peak1_125_1056_-0.0975381902445438_9.99699056626041_0.792357852580131 chr12 25361781 25364467 + 0.792357852580131 NA Intergenic Intergenic 233950 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_51_374_-0.168713229555955_8.46639017060527_0.792019619448263 chr11 52299827 52300713 + 0.792019619448263 NA Intergenic Intergenic -17256 NM_001313981 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak2_51_374_-0.168713229555955_8.46639017060527_0.792019619448263 chr4 155769583 155770664 + 0.792019619448263 NA 3' UTR (NM_147776, exon 4 of 4) 3' UTR (NM_147776, exon 4 of 4) 4438 NM_147776 246228 Mm.26515 NM_147776 ENSMUSG00000042116 Vwa1 4932416A11Rik|WARP von Willebrand factor A domain containing 1 protein-coding common_peak1_83_550_0.124790757600053_9.16830388737118_0.791894402496477 chr19 10881184 10882276 + 0.791894402496477 NA promoter-TSS (NM_134142) promoter-TSS (NM_134142) 13 NM_134142 68539 Mm.251890 NM_134142 ENSMUSG00000034659 Tmem109 1110006I15Rik|AA958958|C77652 transmembrane protein 109 protein-coding common_peak1_28_137_0.240138857734399_7.22859388564537_0.790949497232511 chr7 80866196 80866797 + 0.790949497232511 NA intron (NM_009553, intron 2 of 2) intron (NM_009553, intron 2 of 2) 4388 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak2_392_3854_0.0487066331977601_11.9368684614013_0.790929467243249 chr10 117914714 117922896 + 0.790929467243249 NA Intergenic Intergenic -6654 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_96_775_-0.114574478823718_9.54262560277527_0.790753462645475 chr7 114116455 114118132 + 0.790753462645475 NA intron (NM_025846, intron 1 of 5) CpG 488 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak2_78_508_0.130577245037621_9.05681046859451_0.79075264968655 chr1 60408733 60410623 + 0.79075264968655 NA promoter-TSS (NM_001198571) promoter-TSS (NM_001198571) 59 NM_001198570 329165 Mm.212066 NM_198127 ENSMUSG00000026782 Abi2 8430425M24Rik|AI839867|C130078H13 abl-interactor 2 protein-coding unique_peak2_23_106_0.272308481690948_6.87762122724662_0.790625689510307-2 chr9 106752199 106753065 + 0.790625689510307 NA intron (NM_030730, intron 2 of 21) B4A|SINE|B4 36581 NM_030730 81000 Mm.246689 NM_030730 ENSMUSG00000040661 Rad54l2 Arip4|D130058C05|G630026H09Rik|Srisnf2l RAD54 like 2 (S. cerevisiae) protein-coding common_peak1_23_106_0.272308481690948_6.87762122724662_0.790625689510307 chr10 122801344 122801728 + 0.790625689510307 NA intron (NM_176919, intron 2 of 8) B2_Mm2|SINE|B2 122221 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA unique_peak2_23_106_0.272308481690948_6.87762122724662_0.790625689510307 chr10 44840043 44841112 + 0.790625689510307 NA Intergenic ORR1F|LTR|ERVL-MaLR -226637 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak1_49_357_-0.171188273941516_8.3982216402935_0.790607715011979 chr10 85829095 85829906 + 0.790607715011979 NA Intergenic CpG -42331 NM_133993 103136 Mm.18834 NM_133993 ENSMUSG00000001785 Pwp1 2310058A11Rik|2610205J09Rik|AI098170|AL022879|AV083409|AW550690 PWP1 homolog, endonuclein protein-coding common_peak1_54_318_0.163878404621046_8.39935181607539_0.79060771501188 chr2 38535827 38536520 + 0.79060771501188 NA intron (NM_001159631, intron 1 of 9) intron (NM_001159631, intron 1 of 9) 24297 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak1_117_849_0.100819685203117_9.78172887362662_0.790548074192092 chr8 106935216 106936645 + 0.790548074192092 NA exon (NM_009229, exon 1 of 7) exon (NM_009229, exon 1 of 7) 180 NM_009229 20650 Mm.30228 NM_009229 ENSMUSG00000041308 Sntb2 Snt2 syntrophin, basic 2 protein-coding unique_peak2_21_140_-0.279753609704843_6.99967454754637_0.790329511085542-2 chr17 44078614 44079487 + 0.790329511085542 NA intron (NM_032003, intron 1 of 3) intron (NM_032003, intron 1 of 3) 202 NM_001168620 83965 Mm.30145 NM_032003 ENSMUSG00000023960 Enpp5 AW061004|D17Abb1e|E-NPP 5 ectonucleotide pyrophosphatase/phosphodiesterase 5 protein-coding common_peak1_21_140_-0.279753609704843_6.99967454754637_0.790329511085542-2 chr17 71288203 71288794 + 0.790329511085542 NA intron (NM_145158, intron 2 of 7) intron (NM_145158, intron 2 of 7) 22467 NM_145158 246707 Mm.23462 NM_145158 ENSMUSG00000024053 Emilin2 FOAP-10 elastin microfibril interfacer 2 protein-coding common_peak1_21_140_-0.279753609704843_6.99967454754637_0.790329511085542-3 chrX 68678069 68678486 + 0.790329511085542 NA promoter-TSS (NM_001290424) promoter-TSS (NM_001290424) 122 NR_033481 100038638 Mm.368431 NR_033481 ENSMUSG00000096946 Fmr1os Asfmr1|ENSMUSG00000073146|Gm10474 fragile X mental retardation syndrome 1, opposite strand ncRNA unique_peak2_21_140_-0.279753609704843_6.99967454754637_0.790329511085542 chr16 52037737 52039042 + 0.790329511085542 NA intron (NM_001033238, intron 2 of 17) intron (NM_001033238, intron 2 of 17) 6840 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_21_140_-0.279753609704843_6.99967454754637_0.790329511085542 chr17 31840590 31841115 + 0.790329511085542 NA Intergenic Intergenic 14940 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak2_73_467_0.136031242814362_8.93838034099059_0.790185890246001 chr6 88083896 88085395 + 0.790185890246001 NA exon (NM_133933, exon 1 of 10) exon (NM_133933, exon 1 of 10) 172 NM_133933 103963 Mm.188544 NM_133933 ENSMUSG00000030062 Rpn1 AU018702|D6Wsu137e|Rpn-1 ribophorin I protein-coding common_peak1_65_493_-0.144434972737441_8.87614974521596_0.790037579739449 chr2 25331822 25332631 + 0.790037579739449 NA promoter-TSS (NM_001029983) promoter-TSS (NM_001029983) 345 NR_027448 100272219 Mm.382103 NR_027448 ENSMUSG00000097345 AA543186 - expressed sequence AA543186 ncRNA common_peak2_15_99_-0.347602926649556_6.47005472644995_0.790033289971848 chr9 107587665 107588346 + 0.790033289971848 NA TTS (NM_178020) TTS (NM_178020) 287 NM_025903 15983 Mm.215335 NM_025903 ENSMUSG00000010048 Ifrd2 1810034A24Rik|AA470234|AI838527|SKMc15 interferon-related developmental regulator 2 protein-coding common_peak1_15_99_-0.347602926649556_6.47005472644995_0.790033289971848-3 chr6 130231290 130231699 + 0.790033289971848 NA intron (NM_014194, intron 1 of 6) intron (NM_014194, intron 1 of 6) 193 NM_014194 16638 Mm.441781 NM_014194 ENSMUSG00000067599 Klra7 LGL-1|Ly-49G.1|Ly-49G.2|Ly-49G.3|Ly49G.4|Ly49g|Ly49g1|Ly49g2 killer cell lectin-like receptor, subfamily A, member 7 protein-coding unique_peak2_15_99_-0.347602926649556_6.47005472644995_0.790033289971848-2 chr2 25170547 25171453 + 0.790033289971848 NA Intergenic Intergenic -9758 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak1_15_99_-0.347602926649556_6.47005472644995_0.790033289971848-2 chr2 59647548 59647889 + 0.790033289971848 NA intron (NM_198294, intron 2 of 26) intron (NM_198294, intron 2 of 26) 949 NM_001290659 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak1_15_99_-0.347602926649556_6.47005472644995_0.790033289971848 chr2 25155518 25155910 + 0.790033289971848 NA Intergenic ID_B1|SINE|B4 -25044 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding unique_peak2_15_99_-0.347602926649556_6.47005472644995_0.790033289971848 chr14 101878437 101879164 + 0.790033289971848 NA intron (NM_201529, intron 6 of 30) intron (NM_201529, intron 6 of 30) 148872 NM_201529 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding common_peak2_169_1347_0.0816493778569889_10.4374294701104_0.789814456932198 chr16 49838948 49841168 + 0.789814456932198 NA Intergenic Intergenic -15596 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_220_1875_0.0690970635336292_10.9079926442822_0.789786134954865 chr6 71543572 71544952 + 0.789786134954865 NA intron (NM_025783, intron 1 of 5) CpG 408 NM_025783 66700 Mm.181278 NM_025783 ENSMUSG00000053119 Chmp3 25.1|4921505F14Rik|9130011K15Rik|CGI-49|D6Ertd286e|NEDF|Vps24 charged multivesicular body protein 3 protein-coding common_peak2_47_340_-0.173240149745721_8.32700785415131_0.789727759162374-2 chr17 31855980 31857047 + 0.789727759162374 NA promoter-TSS (NM_010831) promoter-TSS (NM_010831) -721 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak2_47_340_-0.173240149745721_8.32700785415131_0.789727759162374 chr11 115823914 115824941 + 0.789727759162374 NA intron (NM_145438, intron 1 of 25) CpG 369 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 lethal giant larvae homolog 2 (Drosophila) protein-coding common_peak2_80_627_-0.128278665898749_9.23048141594225_0.789673445767768 chr15 77819250 77822211 + 0.789673445767768 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 21445 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_88_700_-0.120252265246435_9.39314450138741_0.789545678261804 chr1 155145535 155146912 + 0.789545678261804 NA intron (NM_008209, intron 1 of 5) intron (NM_008209, intron 1 of 5) 557 NM_008209 15064 Mm.7580 NM_008209 ENSMUSG00000026471 Mr1 H2ls major histocompatibility complex, class I-related protein-coding common_peak2_58_433_-0.156024827402653_8.68353881874315_0.789107908764285 chr18 46958418 46959585 + 0.789107908764285 NA intron (NM_178377, intron 1 of 6) CpG 125 NM_178377 69456 Mm.210734 NM_178377 ENSMUSG00000042705 Commd10 2310003A05Rik|AU019438|DRWMS2 COMM domain containing 10 protein-coding common_peak1_35_244_-0.205340265943548_7.8339678060308_0.789059907002298 chr7 29237541 29238192 + 0.789059907002298 NA promoter-TSS (NM_029887) promoter-TSS (NM_029887) -457 NM_001110201 77254 Mm.36699 NM_029887 ENSMUSG00000030588 Yif1b 9430029K10Rik|Yip1b Yip1 interacting factor homolog B (S. cerevisiae) protein-coding common_peak1_14_56_0.349154107246607_6.00746706778804_0.788925108854929 chr11 117989619 117989952 + 0.788925108854929 NA intron (NM_133757, intron 1 of 9) intron (NM_133757, intron 1 of 9) 2928 NM_133757 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak1_14_56_0.349154107246607_6.00746706778804_0.788925108854929-2 chr12 104209389 104209781 + 0.788925108854929 NA Intergenic Intergenic -4959 NM_001168294 238393 Mm.483584 NM_001033335 ENSMUSG00000066363 Serpina3f 2A1|BC049975 serine (or cysteine) peptidase inhibitor, clade A, member 3F protein-coding common_peak2_149_1150_0.0880899013437944_10.2127170688041_0.78875027857712 chr10 78302976 78306421 + 0.78875027857712 NA intron (NM_053014, intron 2 of 9) B1_Mm|SINE|Alu 35509 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA common_peak2_301_3002_-0.0570560633852413_11.5236607278645_0.788711233530955 chr6 85960150 85963024 + 0.788711233530955 NA promoter-TSS (NM_028099) promoter-TSS (NM_028099) 80 NM_028099 72102 Mm.24007 NM_028099 ENSMUSG00000030002 Dusp11 2010300F21Rik|AI481497 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) protein-coding unique_peak2_26_176_-0.245397983243403_7.3449065584613_0.788669797042903 chr19 40266955 40268341 + 0.788669797042903 NA intron (NM_016861, intron 1 of 6) intron (NM_016861, intron 1 of 6) 3968 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak2_26_176_-0.245397983243403_7.3449065584613_0.788669797042903 chr16 59638984 59639958 + 0.788669797042903 NA promoter-TSS (NM_019665) promoter-TSS (NM_019665) -132 NM_019665 56297 Mm.392505 NM_019665 ENSMUSG00000022722 Arl6 1110018H24Rik|2210411E14Rik|BBS3 ADP-ribosylation factor-like 6 protein-coding common_peak2_61_372_0.150262695665425_8.61816316808795_0.788600260696504 chr2 127512532 127514079 + 0.788600260696504 NA intron (NR_110989, intron 1 of 8) intron (NR_110989, intron 1 of 8) 8087 NM_001291005 56461 Mm.315292 NM_019789 ENSMUSG00000079056 Kcnip3 4933407H12Rik|AI413860|Csen|DREAM|KChIP3|R74849 Kv channel interacting protein 3, calsenilin protein-coding unique_peak2_18_119_-0.306526392211628_6.7536273995027_0.788445440019706-2 chr5 120129544 120130386 + 0.788445440019706 NA intron (NM_028762, intron 11 of 23) B3|SINE|B2 9298 NR_045793 100503427 Mm.446834 NR_045793 ENSMUSG00000097368 Gm10390 ENSMUSG00000072671 predicted gene 10390 ncRNA common_peak1_18_119_-0.306526392211628_6.7536273995027_0.788445440019706 chr10 111505882 111506288 + 0.788445440019706 NA promoter-TSS (NM_009344) promoter-TSS (NM_009344) -201 NM_009344 21664 Mm.3117 NM_009344 ENSMUSG00000020205 Phlda1 DT1P1B11|TDAG51|Tdag pleckstrin homology like domain, family A, member 1 protein-coding common_peak1_18_119_-0.306526392211628_6.7536273995027_0.788445440019706-6 chr9 111137672 111138158 + 0.788445440019706 NA intron (NM_001164838, intron 2 of 14) B4A|SINE|B4 19804 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding common_peak1_18_119_-0.306526392211628_6.7536273995027_0.788445440019706-2 chr11 120726905 120727275 + 0.788445440019706 NA exon (NM_026428, exon 2 of 8) exon (NM_026428, exon 2 of 8) 191 NM_026428 67880 Mm.231091 NM_026428 ENSMUSG00000039450 Dcxr 0610038K04Rik|1810027P18Rik|XR dicarbonyl L-xylulose reductase protein-coding common_peak1_18_119_-0.306526392211628_6.7536273995027_0.788445440019706-4 chr6 56921259 56921793 + 0.788445440019706 NA intron (NM_026004, intron 1 of 8) RMER4B|LTR|ERVK 2406 NM_026004 107569 Mm.158936 NM_026004 ENSMUSG00000029780 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III protein-coding common_peak1_18_119_-0.306526392211628_6.7536273995027_0.788445440019706-3 chr13 14629866 14630304 + 0.788445440019706 NA promoter-TSS (NM_134067) promoter-TSS (NM_134067) -160 NM_001104646 105351 Mm.41450 NM_134067 ENSMUSG00000039182 AW209491 - expressed sequence AW209491 protein-coding common_peak2_18_119_-0.306526392211628_6.7536273995027_0.788445440019706 chrX 95444259 95444992 + 0.788445440019706 NA intron (NM_175179, intron 1 of 1) intron (NM_175179, intron 1 of 1) 215 NM_175179 72345 Mm.182867 NM_175179 ENSMUSG00000050332 Amer1 2810002O09Rik|AW492303|Fam123b|Wtx APC membrane recruitment 1 protein-coding unique_peak2_18_119_-0.306526392211628_6.7536273995027_0.788445440019706 chr19 10815454 10816094 + 0.788445440019706 NA intron (NM_009852, intron 1 of 12) MIRb|SINE|MIR 14284 NM_001037801 12511 Mm.290897 NM_009852 ENSMUSG00000024670 Cd6 - CD6 antigen protein-coding common_peak1_18_119_-0.306526392211628_6.7536273995027_0.788445440019706-5 chr9 61627858 61628295 + 0.788445440019706 NA Intergenic Intergenic 255710 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak2_52_303_0.167814251999527_8.33183463944335_0.78820829618911 chr19 46678836 46680984 + 0.78820829618911 NA Intergenic Intergenic -6910 NM_007809 13074 Mm.1262 NM_007809 ENSMUSG00000003555 Cyp17a1 Cyp17|p450c17 cytochrome P450, family 17, subfamily a, polypeptide 1 protein-coding common_peak2_129_1096_-0.0958209788839408_10.0514373209612_0.788086096876795 chr7 135579823 135582255 + 0.788086096876795 NA intron (NM_001316678, intron 1 of 19) intron (NM_001316678, intron 1 of 19) -12442 NM_001316680 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak2_45_324_-0.179222792635951_8.25468451159784_0.787865557753854-2 chr7 63998808 64000357 + 0.787865557753854 NA Intergenic Intergenic -60667 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak2_45_324_-0.179222792635951_8.25468451159784_0.787865557753854 chr7 18839611 18840849 + 0.787865557753854 NA intron (NM_153760, intron 1 of 4) RMER10B|LTR|ERVL 264 NM_153760 243864 Mm.233503 NM_153760 ENSMUSG00000040987 Mill2 Micb MHC I like leukocyte 2 protein-coding common_peak2_81_533_0.127359644564228_9.12437575396967_0.787633816994175 chr17 31839776 31842215 + 0.787633816994175 NA Intergenic Intergenic 14797 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak2_81_533_0.127359644564228_9.12437575396967_0.787633816994175-2 chrX 104669966 104671831 + 0.787633816994175 NA 5' UTR (NM_175358, exon 1 of 12) 5' UTR (NM_175358, exon 1 of 12) 166 NM_175358 108672 Mm.30574 NM_175358 ENSMUSG00000033906 Zdhhc15 6030457O13Rik zinc finger, DHHC domain containing 15 protein-coding common_peak2_126_1066_-0.09713376665038_10.0107775774992_0.787595191568321 chr1 132340988 132343984 + 0.787595191568321 NA Intergenic ID_B1|SINE|B4 25462 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak1_108_889_-0.105919290324124_9.7447018806917_0.787565949761646 chr9 56936904 56938388 + 0.787565949761646 NA exon (NM_133976, exon 1 of 1) exon (NM_133976, exon 1 of 1) 146 NM_133976 102462 Mm.12864 NM_133976 ENSMUSG00000032288 Imp3 1190002L16Rik|AI256594 IMP3, U3 small nucleolar ribonucleoprotein protein-coding common_peak2_404_4002_0.0475817694836618_11.9906567851294_0.787292429948188 chr5 115487983 115491229 + 0.787292429948188 NA Intergenic Intergenic -5122 NM_133760 75387 Mm.332616 NM_133760 ENSMUSG00000029524 Sirt4 4930596O17Rik sirtuin 4 protein-coding common_peak2_123_1036_-0.0982933517062072_9.96905350296012_0.787292070899565 chr5 32745398 32747839 + 0.787292070899565 NA intron (NM_177298, intron 3 of 7) intron (NM_177298, intron 3 of 7) 39008 NM_177298 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding common_peak1_120_1006_-0.0992811233713358_9.92620740632112_0.787193821395364 chr3 87839567 87841137 + 0.787193821395364 NA Intergenic Intergenic -6403 NM_001025571 27371 Mm.86361 NM_021309 ENSMUSG00000028071 Sh2d2a Lad|Ribp|Tsad SH2 domain containing 2A protein-coding common_peak2_120_1006_-0.0992811233713358_9.92620740632112_0.787193821395364 chr6 136827031 136828340 + 0.787193821395364 NA intron (NM_021714, intron 1 of 11) CpG 531 NM_021714 60321 Mm.141197 NM_021714 ENSMUSG00000030216 Wbp11 2510026P17Rik|D6Wsu113e|Npwbp|SIPP1 WW domain binding protein 11 protein-coding unique_peak2_37_260_-0.200929481986639_7.92744125557657_0.786973827747534 chr3 146660798 146662213 + 0.786973827747534 NA Intergenic Intergenic -10188 NM_029144 75015 Mm.250432 NM_029144 ENSMUSG00000048652 4930503B20Rik 1700013A07Rik|1700095G21Rik|4930483N21Rik|Gm1652|Samd13 RIKEN cDNA 4930503B20 gene protein-coding common_peak1_37_260_-0.200929481986639_7.92744125557657_0.786973827747534 chr13 59508664 59509375 + 0.786973827747534 NA intron (NM_001284219, intron 10 of 24) intron (NM_001284219, intron 10 of 24) 35432 NM_001284221 67269 Mm.153008 NM_023328 ENSMUSG00000021557 Agtpbp1 1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd ATP/GTP binding protein 1 protein-coding common_peak2_169_1507_-0.080166554229816_10.5183374361538_0.786841179909979 chr13 93190974 93193059 + 0.786841179909979 NA intron (NM_133905, intron 1 of 14) intron (NM_133905, intron 1 of 14) 267 NM_133905 100715 Mm.242865 NM_133905 ENSMUSG00000042167 Papd4 8030446C20Rik|AI649009|GLD-2|Gld2 PAP associated domain containing 4 protein-coding common_peak1_117_977_-0.101551938724052_9.88291468559021_0.786804599337278 chr2 119896783 119898443 + 0.786804599337278 NA intron (NM_001164274, intron 1 of 22) CpG 385 NM_013720 29808 Mm.87532 NM_013720 ENSMUSG00000033943 Mga AV312082|C130042M01Rik|C80739|D030062C11Rik|Mad5 MAX gene associated protein-coding common_peak2_127_941_0.0965069470714521_9.92783672314851_0.786694488662659 chr11 69015240 69016881 + 0.786694488662659 NA 5' UTR (NM_001143790, exon 1 of 23) 5' UTR (NM_001143790, exon 1 of 23) 149 NM_001013256 68964 Mm.285785 NM_001013256 ENSMUSG00000020898 Ctc1 1500010J02Rik|AAF-132|AAF132 CTS telomere maintenance complex component 1 protein-coding common_peak2_176_1582_-0.0787846189420716_10.5890532306661_0.786621795209746 chr18 6515059 6517184 + 0.786621795209746 NA promoter-TSS (NM_007935) promoter-TSS (NM_007935) -13 NM_007935 13831 Mm.312133 NM_007935 ENSMUSG00000024240 Epc1 2400007E14Rik|5730566F07Rik|A930032N02Rik|mir-1893 enhancer of polycomb homolog 1 (Drosophila) protein-coding common_peak1_43_308_-0.185052974024067_8.17893654089234_0.786553793708223 chr8 124520733 124521363 + 0.786553793708223 NA intron (NM_029746, intron 1 of 17) intron (NM_029746, intron 1 of 17) 281 NM_029746 76332 Mm.240108 NM_029746 ENSMUSG00000031979 Cog2 1190002B08Rik|2700012E02Rik|C86089|Ldlc component of oligomeric golgi complex 2 protein-coding common_peak2_43_308_-0.185052974024067_8.17893654089234_0.786553793708223 chr7 27232421 27233747 + 0.786553793708223 NA promoter-TSS (NM_133770) promoter-TSS (NM_133770) 71 NM_133770 76889 Mm.124728 NM_133770 ENSMUSG00000003762 Coq8b 0610012P18Rik|Adck4 coenzyme Q8B protein-coding unique_peak2_39_276_-0.195995627232056_8.01574435243316_0.785977418839996 chr17 80500645 80502442 + 0.785977418839996 NA Intergenic Intergenic -21090 NM_009231 20662 Mm.60975 NM_009231 ENSMUSG00000024241 Sos1 4430401P03Rik|9630010N06|AI449023 son of sevenless homolog 1 (Drosophila) protein-coding common_peak2_39_276_-0.195995627232056_8.01574435243316_0.785977418839996 chr19 6306045 6307100 + 0.785977418839996 NA 5' UTR (NM_001033342, exon 1 of 37) 5' UTR (NM_001033342, exon 1 of 37) 115 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak1_39_276_-0.195995627232056_8.01574435243316_0.785977418839996 chrX 152336695 152337464 + 0.785977418839996 NA 3' UTR (NM_029836, exon 7 of 7) 3' UTR (NM_029836, exon 7 of 7) 5405 NM_029836 52808 Mm.9997 NM_029836 ENSMUSG00000041096 Tspyl2 CDA1|CINAP|DENTT|DXBwg1396e|DXHXS1008E|E130307F10Rik TSPY-like 2 protein-coding unique_peak2_39_276_-0.195995627232056_8.01574435243316_0.785977418839996-2 chr2 72856657 72858231 + 0.785977418839996 NA Intergenic Intergenic -43727 NR_102349 76218 Mm.75260 NR_102348 ENSMUSG00000085427 6430710C18Rik 5033406J01Rik RIKEN cDNA 6430710C18 gene ncRNA common_peak2_39_276_-0.195995627232056_8.01574435243316_0.785977418839996-2 chr4 145254692 145255534 + 0.785977418839996 NA Intergenic (CATA)n|Simple_repeat|Simple_repeat -8243 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_41_292_-0.190669899437394_8.09942190470355_0.785885831170132 chr17 32423399 32424241 + 0.785885831170132 NA intron (NM_001271476, intron 1 of 5) intron (NM_001271476, intron 1 of 5) 347 NM_001271476 57757 Mm.86752 NM_021319 ENSMUSG00000079563 Pglyrp2 C730002N09Rik|PGRP-L|Pglyrpl|tagL peptidoglycan recognition protein 2 protein-coding common_peak1_41_292_-0.190669899437394_8.09942190470355_0.785885831170132-2 chr2 32876190 32876779 + 0.785885831170132 NA intron (NM_146119, intron 1 of 13) CpG 350 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_30_150_0.228277465409228_7.35254347202969_0.785680462264163 chr10 61475904 61476563 + 0.785680462264163 NA intron (NM_153542, intron 1 of 4) CpG 400 NM_153542 216011 Mm.136116 NM_153542 ENSMUSG00000037151 Lrrc20 BC036304 leucine rich repeat containing 20 protein-coding common_peak1_73_563_-0.133155390001027_9.07297365739828_0.785292338725194-2 chr13 59584120 59585073 + 0.785292338725194 NA promoter-TSS (NM_030153) promoter-TSS (NM_030153) 627 NR_045633 319469 Mm.437992 NR_045633 ENSMUSG00000021557 A230056J06Rik - RIKEN cDNA A230056J06 gene ncRNA common_peak1_73_563_-0.133155390001027_9.07297365739828_0.785292338725194 chr10 42837990 42839022 + 0.785292338725194 NA Intergenic RMER4B|LTR|ERVK -22006 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak1_68_519_-0.13977249278166_8.95248156663762_0.785246182400277 chr8 124721457 124722628 + 0.785246182400277 NA promoter-TSS (NM_145607) promoter-TSS (NM_145607) -67 NM_145607 234875 Mm.38436 NM_145607 ENSMUSG00000037300 Ttc13 BC017545 tetratricopeptide repeat domain 13 protein-coding common_peak2_140_1064_0.090627888466102_10.1019516593463_0.78519806474979 chr4 62359567 62361453 + 0.78519806474979 NA promoter-TSS (NM_175090) promoter-TSS (NM_175090) 38 NM_001045528 338355 Mm.357792 NM_001045528 ENSMUSG00000066151 Fkbp15 BB131447|C430014M02Rik|FKBO133|FKBP-133|FKBP-15|FKBP133|mKIAA0674 FK506 binding protein 15 protein-coding unique_peak2_59_357_0.151452966519804_8.55954226052416_0.784744079313263 chr10 117807165 117809323 + 0.784744079313263 NA Intergenic Intergenic -15539 NM_134010 103468 Mm.12568 NM_134010 ENSMUSG00000052798 Nup107 AW541137|C76801 nucleoporin 107 protein-coding common_peak2_50_289_0.167761687112522_8.2637899335712_0.784695305921728-2 chr4 62475386 62476934 + 0.784695305921728 NA Intergenic Intergenic -3907 NM_138653 192120 Mm.29808 NM_138653 ENSMUSG00000028392 Bspry - B-box and SPRY domain containing protein-coding common_peak2_50_289_0.167761687112522_8.2637899335712_0.784695305921728 chr11 76398405 76399986 + 0.784695305921728 NA promoter-TSS (NM_008750) promoter-TSS (NM_008750) -54 NM_008750 18230 Mm.27915 NM_008750 ENSMUSG00000020844 Nxn l11Jus13 nucleoredoxin protein-coding common_peak2_420_4479_-0.0462697730929467_12.1061481303985_0.783709145560342 chr11 53791927 53798673 + 0.783709145560342 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 24827 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak1_195_1787_-0.0740301618999215_10.7671159402334_0.783464556322543 chr5 34168599 34170406 + 0.783464556322543 NA promoter-TSS (NM_146159) promoter-TSS (NM_146159) 24 NM_001289803 272158 Mm.319286 NM_181857 ENSMUSG00000045102 Poln POL4P DNA polymerase N protein-coding common_peak1_81_635_-0.124827379032572_9.25046926576807_0.783250553730939 chr6 48740143 48740869 + 0.783250553730939 NA intron (NM_175860, intron 1 of 2) intron (NM_175860, intron 1 of 2) 1459 NM_008376 16205 Mm.252599 NM_008376 ENSMUSG00000090019 Gimap1 IAP38|Imap38|imap GTPase, IMAP family member 1 protein-coding common_peak2_48_274_0.173588428498663_8.19008202266135_0.783224051198654 chr1 187215044 187216135 + 0.783224051198654 NA promoter-TSS (NM_029067) promoter-TSS (NM_029067) 78 NM_026367 67769 Mm.138321 NM_026367 ENSMUSG00000039210 Gpatch2 5830433G22Rik|5830436K05Rik|AI427714|AI447508|AW107440|AW491060|Gpatc2 G patch domain containing 2 protein-coding common_peak1_48_274_0.173588428498663_8.19008202266135_0.783224051198654 chr6 124711432 124712170 + 0.783224051198654 NA promoter-TSS (NM_007531) promoter-TSS (NM_007531) 377 NM_013536 14791 Mm.6390 NM_013536 ENSMUSG00000004268 Emg1 C2f|Grcc2f EMG1 N1-specific pseudouridine methyltransferase protein-coding common_peak1_20_89_0.285621547468823_6.63466387006409_0.783142886066638-3 chr11 76845079 76845546 + 0.783142886066638 NA intron (NM_007754, intron 1 of 20) intron (NM_007754, intron 1 of 20) 1696 NM_007754 12874 Mm.276736 NM_007754 ENSMUSG00000020841 Cpd AA960140|AW322530|D830034L15Rik carboxypeptidase D protein-coding common_peak1_20_89_0.285621547468823_6.63466387006409_0.783142886066638-8 chr2 68875736 68876228 + 0.783142886066638 NA intron (NM_172856, intron 1 of 9) intron (NM_172856, intron 1 of 9) 14425 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak1_20_89_0.285621547468823_6.63466387006409_0.783142886066638-5 chr17 34293912 34294385 + 0.783142886066638 NA Intergenic Intergenic -6377 NM_010378 14960 Mm.235338 NM_010378 ENSMUSG00000036594 H2-Aa Aalpha|H-2Aa|H2Aa|I-Aalpha|IAalpha|Ia-1|Ia1 histocompatibility 2, class II antigen A, alpha protein-coding common_peak1_20_89_0.285621547468823_6.63466387006409_0.783142886066638-7 chr2 11211495 11211963 + 0.783142886066638 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 39347 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_20_89_0.285621547468823_6.63466387006409_0.783142886066638-2 chr10 67004755 67005189 + 0.783142886066638 NA promoter-TSS (NR_110511) promoter-TSS (NR_110511) -103 NR_110511 102634101 Mm.445258 NR_110511 Gm31763 - predicted gene, 31763 ncRNA common_peak1_20_89_0.285621547468823_6.63466387006409_0.783142886066638-4 chr11 97029717 97030235 + 0.783142886066638 NA promoter-TSS (NM_146027) promoter-TSS (NM_146027) 24 NM_146027 217140 Mm.46189 NM_146027 ENSMUSG00000020877 Scrn2 AV001119|D11Moh48|SES2 secernin 2 protein-coding common_peak1_20_89_0.285621547468823_6.63466387006409_0.783142886066638-9 chr8 117126775 117127325 + 0.783142886066638 NA intron (NM_001163028, intron 7 of 11) intron (NM_001163028, intron 7 of 11) -31085 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding common_peak2_20_89_0.285621547468823_6.63466387006409_0.783142886066638 chr7 141131126 141131797 + 0.783142886066638 NA exon (NM_013782, exon 1 of 12) exon (NM_013782, exon 1 of 12) 175 NM_013782 27388 Mm.293591 NM_013782 ENSMUSG00000025495 Ptdss2 AI481134|AI988017|PSS2 phosphatidylserine synthase 2 protein-coding common_peak1_20_89_0.285621547468823_6.63466387006409_0.783142886066638-6 chr19 53435366 53435835 + 0.783142886066638 NA Intergenic Intergenic 29196 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_20_89_0.285621547468823_6.63466387006409_0.783142886066638 chr1 106710531 106710922 + 0.783142886066638 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) 3564 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak1_196_1623_0.0737706994401233_10.7022212669052_0.783082623576834 chr1 134493925 134495514 + 0.783082623576834 NA promoter-TSS (NM_145510) promoter-TSS (NM_145510) 59 NM_145510 98710 Mm.198119 NM_145510 ENSMUSG00000042229 Rabif AI842864|AW549708|E130318E12Rik|MSS4|RASGFR3 RAB interacting factor protein-coding unique_peak2_17_72_0.31486080299265_6.34725496037634_0.783046215318607-3 chr9 65010216 65010783 + 0.783046215318607 NA exon (NM_021345, exon 2 of 11) exon (NM_021345, exon 2 of 11) 11218 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak1_17_72_0.31486080299265_6.34725496037634_0.783046215318607-4 chr4 45108298 45108724 + 0.783046215318607 NA promoter-TSS (NM_001134646) promoter-TSS (NM_001134646) -398 NM_001099675 68512 Mm.282081 NM_001099675 ENSMUSG00000078713 Tomm5 1110019J04Rik|Tom5 translocase of outer mitochondrial membrane 5 homolog (yeast) protein-coding unique_peak2_17_72_0.31486080299265_6.34725496037634_0.783046215318607 chr17 29841863 29842530 + 0.783046215318607 NA exon (NM_001081160, exon 9 of 16) exon (NM_001081160, exon 9 of 16) 45686 NM_001081160 74762 Mm.40901 NM_001081160 ENSMUSG00000043557 Mdga1 1200011I03Rik|GPIM|Mamdc3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding unique_peak2_17_72_0.31486080299265_6.34725496037634_0.783046215318607-2 chr6 86121687 86122327 + 0.783046215318607 NA 3' UTR (NM_001271859, exon 16 of 16) 3' UTR (NM_001271859, exon 16 of 16) 43959 NM_001271859 11519 Mm.104155 NM_013458 ENSMUSG00000030000 Add2 2900072M03Rik|add97 adducin 2 (beta) protein-coding common_peak1_17_72_0.31486080299265_6.34725496037634_0.783046215318607-6 chr7 75374234 75374573 + 0.783046215318607 NA Intergenic RMER21B|LTR|ERV1 -65141 NM_153579 64176 Mm.273082 NM_153579 ENSMUSG00000053025 Sv2b A830038F04Rik|AI850768|mKIAA0735 synaptic vesicle glycoprotein 2 b protein-coding common_peak1_17_72_0.31486080299265_6.34725496037634_0.783046215318607-5 chr4 145214338 145214783 + 0.783046215318607 NA 3' UTR (NM_011610, exon 10 of 10) 3' UTR (NM_011610, exon 10 of 10) -19555 NM_001276465 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding common_peak2_17_72_0.31486080299265_6.34725496037634_0.783046215318607 chr14 65149171 65149864 + 0.783046215318607 NA Intergenic Intergenic -51411 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak1_17_72_0.31486080299265_6.34725496037634_0.783046215318607-2 chr10 75306200 75306629 + 0.783046215318607 NA intron (NM_153406, intron 13 of 15) intron (NM_153406, intron 13 of 15) -10463 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_17_72_0.31486080299265_6.34725496037634_0.783046215318607 chr10 57743688 57744164 + 0.783046215318607 NA Intergenic Intergenic -40997 NM_021272 12140 Mm.3644 NM_021272 ENSMUSG00000019874 Fabp7 B-FABP|BFABP|Blbp|MRG fatty acid binding protein 7, brain protein-coding common_peak1_17_72_0.31486080299265_6.34725496037634_0.783046215318607-3 chr11 11733359 11733846 + 0.783046215318607 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 43425 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_106_869_-0.105901171380317_9.71192100504593_0.782951973511378 chr6 47919950 47921396 + 0.782951973511378 NA 5' UTR (NM_145576, exon 1 of 5) 5' UTR (NM_145576, exon 1 of 5) 105 NM_001145881 232784 Mm.196782 NM_145576 ENSMUSG00000052763 Zfp212 Znf212|mKIAA3011 Zinc finger protein 212 protein-coding common_peak1_214_1996_-0.0697858603117005_10.9287256872881_0.782764956668731 chr5 22549205 22550922 + 0.782764956668731 NA promoter-TSS (NR_102315) promoter-TSS (NR_102315) 268 NM_011959 26429 Mm.412217 NM_011959 ENSMUSG00000029012 Orc5 AL033327|MmORC5|Orc5l origin recognition complex, subunit 5 protein-coding common_peak2_98_679_0.112063527676462_9.46542269997593_0.782749850192268 chr4 41755108 41756355 + 0.782749850192268 NA promoter-TSS (NM_001302511) promoter-TSS (NM_001302511) -479 NM_001302511 14430 Mm.439669 NM_016658 ENSMUSG00000036073 Galt AW553376 galactose-1-phosphate uridyl transferase protein-coding common_peak2_52_381_-0.161687062592636_8.49658529673943_0.782489188631685 chr11 118290286 118291203 + 0.782489188631685 NA promoter-TSS (NM_001033528) promoter-TSS (NM_001033528) -500 NM_001033528 72344 Mm.232293 NM_001033528 ENSMUSG00000033909 Usp36 2700002L06Rik|mKIAA1453 ubiquitin specific peptidase 36 protein-coding common_peak2_57_341_0.157423110813028_8.49656407029241_0.782489188631685 chr1 54835614 54838001 + 0.782489188631685 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 89580 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_28_191_-0.236299186208588_7.46681290761686_0.782446365745568 chr14 106029286 106030656 + 0.782446365745568 NA Intergenic Intergenic -76227 NM_198601 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_28_191_-0.236299186208588_7.46681290761686_0.782446365745568 chr8 122437961 122438673 + 0.782446365745568 NA intron (NM_138656, intron 4 of 9) intron (NM_138656, intron 4 of 9) 5105 NM_138656 192156 Mm.28146 NM_138656 ENSMUSG00000006517 Mvd C78718|Mpd mevalonate (diphospho) decarboxylase protein-coding unique_peak2_32_163_0.219767943042796_7.46743597613948_0.782446365745519 chr13 113556063 113557360 + 0.782446365745519 NA Intergenic ORR1B2|LTR|ERVL-MaLR -53867 NR_045501 70917 Mm.491036 NR_045501 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak1_32_163_0.219767943042796_7.46743597613948_0.782446365745519 chr10 21907743 21908378 + 0.782446365745519 NA intron (NM_001161845, intron 1 of 13) intron (NM_001161845, intron 1 of 13) 25876 NM_001161845 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_118_986_-0.0998339042167533_9.89698932234802_0.782217631475673 chr1 74587284 74588665 + 0.782217631475673 NA promoter-TSS (NM_025784) promoter-TSS (NM_025784) 54 NM_001310668 77264 Mm.207298 NM_029888 ENSMUSG00000026135 Zfp142 9330177B18Rik|BB154236|mKIAA0236 zinc finger protein 142 protein-coding common_peak1_118_986_-0.0998339042167533_9.89698932234802_0.782217631475673-2 chr6 136827230 136828250 + 0.782217631475673 NA intron (NM_021714, intron 1 of 11) CpG 476 NM_021714 60321 Mm.141197 NM_021714 ENSMUSG00000030216 Wbp11 2510026P17Rik|D6Wsu113e|Npwbp|SIPP1 WW domain binding protein 11 protein-coding unique_peak2_10_66_-0.432903758950176_5.84963731098268_0.781782704927505 chr2 29388011 29388631 + 0.781782704927505 NA intron (NM_001290489, intron 1 of 6) intron (NM_001290489, intron 1 of 6) 9807 NM_001290489 68975 Mm.330109 NM_026896 ENSMUSG00000026799 Med27 1500015J03Rik|2310042P07Rik|AA682045|Crsp8|D2Ertd434e mediator complex subunit 27 protein-coding common_peak1_10_66_-0.432903758950176_5.84963731098268_0.781782704927505 chr2 167933471 167933702 + 0.781782704927505 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 1259 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_92_737_-0.116660285172806_9.46914686347399_0.781390270803336 chr5 73205447 73208517 + 0.781390270803336 NA intron (NM_028194, intron 2 of 62) intron (NM_028194, intron 2 of 62) 49636 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak2_74_476_0.132304252284156_8.96399758214759_0.781365698763719 chr17 56272468 56274857 + 0.781365698763719 NA intron (NM_174989, intron 1 of 1) intron (NM_174989, intron 1 of 1) 3105 NM_174989 106759 Mm.203952 NM_174989 ENSMUSG00000047123 Ticam1 AW046014|AW547018|TICAM-1|TRIF toll-like receptor adaptor molecule 1 protein-coding common_peak1_255_2256_0.0625118046787563_11.1714466055312_0.781258917810959 chr2 136890617 136892655 + 0.781258917810959 NA promoter-TSS (NM_021527) promoter-TSS (NM_021527) -230 NM_001286983 59030 Mm.272570 NM_021527 ENSMUSG00000027274 Mkks 1300013E18Rik|AI463362|AI957237|Bbs6 McKusick-Kaufman syndrome protein-coding unique_peak2_23_154_-0.262348937182143_7.14494993668317_0.781221152614987 chr6 54162962 54163733 + 0.781221152614987 NA intron (NM_001163640, intron 1 of 12) intron (NM_001163640, intron 1 of 12) -101511 NM_001311133 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak1_23_154_-0.262348937182143_7.14494993668317_0.781221152614987 chr2 79263365 79263909 + 0.781221152614987 NA intron (NM_010576, intron 2 of 27) intron (NM_010576, intron 2 of 27) 8211 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_23_154_-0.262348937182143_7.14494993668317_0.781221152614987-2 chr3 121171119 121171703 + 0.781221152614987 NA exon (NM_025637, exon 2 of 7) exon (NM_025637, exon 2 of 7) 284 NM_028456 66568 Mm.263163 NM_025637 ENSMUSG00000028133 Rwdd3 2510027J23Rik|3110037C01Rik|AI035684|AI662458|Rsume|X2CR1 RWD domain containing 3 protein-coding unique_peak2_23_154_-0.262348937182143_7.14494993668317_0.781221152614987-2 chr7 30909464 30910657 + 0.781221152614987 NA intron (NM_010758, intron 5 of 12) intron (NM_010758, intron 5 of 12) 4772 NM_010758 17136 Mm.241355 NM_010758 ENSMUSG00000036634 Mag Gma|siglec-4a myelin-associated glycoprotein protein-coding common_peak2_34_176_0.213840164440536_7.57452563230327_0.780813662949866 chr3 27182744 27183695 + 0.780813662949866 NA intron (NM_178772, intron 1 of 4) CpG 215 NM_178772 320024 Mm.24576 NM_178772 ENSMUSG00000027698 Nceh1 Aadacl1|B230106I24Rik|CPO-BP|Nceh neutral cholesterol ester hydrolase 1 protein-coding common_peak2_211_1962_-0.0698780696503469_10.903905422641_0.78070401774916 chr3 65973965 65975735 + 0.78070401774916 NA Intergenic CpG -16625 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak2_46_260_0.175225090856133_8.11551854199795_0.780637142059153 chr4 119812201 119813497 + 0.780637142059153 NA Intergenic Intergenic -1829 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak2_44_245_0.183664132225392_8.03434657145194_0.780416726761611 chr8 68793386 68794683 + 0.780416726761611 NA exon (NM_027590, exon 1 of 17) exon (NM_027590, exon 1 of 17) 105 NM_001293792 70885 Mm.252421 NM_027590 ENSMUSG00000031864 Ints10 4921521J11Rik|AI462004 integrator complex subunit 10 protein-coding common_peak2_90_610_0.117316472901317_9.31368680626939_0.780325313741011 chr9 27191365 27193652 + 0.780325313741011 NA Intergenic Intergenic -37087 NM_023277 83964 Mm.28770 NM_023277 ENSMUSG00000031990 Jam3 1110002N23Rik|JAM-3|JAM-C|Jcam3 junction adhesion molecule 3 protein-coding common_peak1_116_840_0.101115975506001_9.76651997800814_0.780301127126906 chr7 109985757 109987123 + 0.780301127126906 NA promoter-TSS (NM_153525) promoter-TSS (NM_153525) -210 NM_153525 233724 Mm.43212 NM_153525 ENSMUSG00000047554 Tmem41b 1500015G02Rik|1500031M19Rik|AU018901|D7Ertd70e|D7Ertd743e transmembrane protein 41B protein-coding common_peak2_375_3649_0.0492872723303464_11.8583243848199_0.780146153376055 chr2 75657624 75661160 + 0.780146153376055 NA intron (NM_146130, intron 1 of 10) CpG 102 NR_033513 627828 Mm.459502 NR_033513 ENSMUSG00000092086 Gm6793 EG627828 heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo common_peak2_171_1528_-0.079420898734142_10.5386622419937_0.77998096138272 chr13 92240662 92243442 + 0.77998096138272 NA intron (NM_010829, intron 19 of 23) MLT1A0|LTR|ERVL-MaLR -112731 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding common_peak1_59_441_-0.152633815607372_8.71158565158775_0.779791863109205 chr2 131352169 131352999 + 0.779791863109205 NA intron (NM_178607, intron 1 of 5) CpG 308 NM_178607 51902 Mm.477523 NM_178607 ENSMUSG00000048911 Rnf24 2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e ring finger protein 24 protein-coding common_peak1_259_2506_-0.0616071381283305_11.2609427117698_0.77960382464956 chr1 164133675 164136235 + 0.77960382464956 NA intron (NM_011347, intron 8 of 15) intron (NM_011347, intron 8 of 15) -16880 NM_007976 14067 Mm.12900 NM_007976 ENSMUSG00000026579 F5 AI173222|Cf-5|Cf5 coagulation factor V protein-coding common_peak1_55_326_0.160030235706198_8.43316194335118_0.779259412665109 chr3 58517534 58518393 + 0.779259412665109 NA Intergenic Intergenic -7858 NM_001005509 229317 Mm.21617 NM_001005509 ENSMUSG00000027810 Eif2a D030048D22|D3Ertd194e eukaryotic translation initiation factor 2A protein-coding common_peak2_98_793_-0.111540733328793_9.57722483047856_0.779209861752304 chr7 132851789 132853236 + 0.779209861752304 NA exon (NM_028095, exon 1 of 6) exon (NM_028095, exon 1 of 6) 135 NM_028095 72096 Mm.28631 NM_028095 ENSMUSG00000030960 Mettl10 2010208K18Rik methyltransferase like 10 protein-coding common_peak1_172_1378_0.079803789978568_10.4693086365033_0.779122191597495 chr15 63997457 63998945 + 0.779122191597495 NA intron (NM_144846, intron 1 of 11) CpG 62247 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding unique_peak2_42_231_0.187746175126379_7.95185408269076_0.779108425938827-2 chr5 64296790 64298293 + 0.779108425938827 NA intron (NM_001310611, intron 14 of 21) intron (NM_001310611, intron 14 of 21) 67184 NM_001289514 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak1_42_231_0.187746175126379_7.95185408269076_0.779108425938827-2 chr15 76879126 76879780 + 0.779108425938827 NA intron (NM_145916, intron 1 of 4) CpG 177 NM_145916 223669 Mm.38948 NM_145916 ENSMUSG00000033669 Zfp7 KRAB20|KRAB7|Krox-2|Zfp-7|Zfp65|Zfp80|Zfp86-rs1|mszf73-2 zinc finger protein 7 protein-coding unique_peak2_42_231_0.187746175126379_7.95185408269076_0.779108425938827 chr11 4205622 4206930 + 0.779108425938827 NA intron (NM_134023, intron 2 of 8) intron (NM_134023, intron 2 of 8) -11975 NM_028022 71962 Mm.7852 NM_028022 ENSMUSG00000020424 Gatsl3 2410008K03Rik GATS protein-like 3 protein-coding common_peak2_42_231_0.187746175126379_7.95185408269076_0.779108425938827 chr15 73544881 73546286 + 0.779108425938827 NA intron (NM_001081066, intron 12 of 22) intron (NM_001081066, intron 12 of 22) 33023 NM_001081066 105841 Mm.322557 NM_001081066 ENSMUSG00000036661 Dennd3 AI447457|E030003N15Rik DENN/MADD domain containing 3 protein-coding common_peak1_42_231_0.187746175126379_7.95185408269076_0.779108425938827 chr11 75012861 75013680 + 0.779108425938827 NA intron (NM_001002764, intron 10 of 18) intron (NM_001002764, intron 10 of 18) 52721 NR_030454 735274 NR_030454 ENSMUSG00000106252 Mir684-1 Mirn684-1 microRNA 684-1 ncRNA unique_peak2_25_119_0.248530649032413_7.03115592012472_0.779092297068732 chr11 117245354 117246602 + 0.779092297068732 NA intron (NM_001113486, intron 2 of 11) ORR1D1|LTR|ERVL-MaLR -20268 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_25_119_0.248530649032413_7.03115592012472_0.779092297068732-2 chr15 64078256 64078773 + 0.779092297068732 NA Intergenic Intergenic -18066 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_25_119_0.248530649032413_7.03115592012472_0.779092297068732 chr1 43467283 43467932 + 0.779092297068732 NA intron (NM_010879, intron 1 of 4) PB1D10|SINE|Alu 21856 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_25_119_0.248530649032413_7.03115592012472_0.779092297068732-3 chrX 140540162 140540753 + 0.779092297068732 NA non-coding (NR_122039, exon 3 of 3) non-coding (NR_122039, exon 3 of 3) 2211 NR_122039 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding common_peak2_25_119_0.248530649032413_7.03115592012472_0.779092297068732 chr9 21851972 21852803 + 0.779092297068732 NA intron (NM_177030, intron 1 of 49) CpG 248 NM_177030 319899 Mm.128153 NM_177030 ENSMUSG00000032198 Dock6 2410095B20Rik|4931431C02Rik|C330023D02Rik|mKIAA1395 dedicator of cytokinesis 6 protein-coding common_peak2_182_1645_-0.0760946532213698_10.6467012938109_0.778998269167763 chr11 70028308 70031368 + 0.778998269167763 NA intron (NM_001109752, intron 2 of 19) intron (NM_001109752, intron 2 of 19) 11233 NM_007864 13385 Mm.27256 NM_007864 ENSMUSG00000020886 Dlg4 Dlgh4|PSD-95|PSD95|SAP90|SAP90A discs, large homolog 4 (Drosophila) protein-coding common_peak2_38_203_0.200518107636365_7.77268439578968_0.778956475105087 chr17 28467447 28468521 + 0.778956475105087 NA intron (NM_010220, intron 1 of 10) intron (NM_010220, intron 1 of 10) 18165 NM_010220 14229 Mm.276405 NM_010220 ENSMUSG00000024222 Fkbp5 D17Ertd592e|Dit1|FKBP-5|FKBP51 FK506 binding protein 5 protein-coding common_peak2_101_821_-0.108711495367871_9.62863883599775_0.778645060472924 chr6 97386445 97388691 + 0.778645060472924 NA intron (NM_145148, intron 6 of 23) intron (NM_145148, intron 6 of 23) -134788 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik leiomodin 3 (fetal) protein-coding common_peak1_175_1570_-0.0778327890411763_10.5785510707736_0.778555527558229 chr9 121313664 121315365 + 0.778555527558229 NA Intergenic CT-rich|Low_complexity|Low_complexity -37342 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding common_peak2_30_206_-0.226804752765019_7.58008458111682_0.778303447071625 chr7 35586008 35586797 + 0.778303447071625 NA promoter-TSS (NM_145840) promoter-TSS (NM_145840) 155 NM_178263 245886 Mm.272620 NM_145633 ENSMUSG00000034867 Ankrd27 AA408090|BC016493|D330003H11Rik|Varp ankyrin repeat domain 27 (VPS9 domain) protein-coding common_peak1_30_206_-0.226804752765019_7.58008458111682_0.778303447071625 chr10 75321307 75321913 + 0.778303447071625 NA intron (NM_009630, intron 1 of 2) intron (NM_009630, intron 1 of 2) 4733 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_30_206_-0.226804752765019_7.58008458111682_0.778303447071625-2 chr8 13620163 13620814 + 0.778303447071625 NA intron (NM_009025, intron 2 of 23) intron (NM_009025, intron 2 of 23) 57099 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_125_1055_-0.0961726482203158_9.9963077952483_0.778244273230063 chrX 94177216 94178956 + 0.778244273230063 NA Intergenic CpG 34565 NM_012010 26905 Mm.218851 NM_012010 ENSMUSG00000035150 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked protein-coding common_peak2_36_190_0.202354823175662_7.67860623962358_0.778120924727429 chr17 33289372 33290254 + 0.778120924727429 NA intron (NM_001142957, intron 1 of 3) intron (NM_001142957, intron 1 of 3) 269 NM_001142957 100043468 Mm.276296 NM_001142957 ENSMUSG00000096910 Zfp955b A430003O12Rik|C430039G02Rik|C530035A18Rik|Gm4455|Zfp883b zinc finger protein 955B protein-coding common_peak2_183_1490_0.0762331953691362_10.580181139968_0.777931569605439 chr11 119490840 119492558 + 0.777931569605439 NA promoter-TSS (NM_177394) promoter-TSS (NM_177394) 79 NM_177394 338371 Mm.271946 NM_177394 ENSMUSG00000039850 Endov A730011L01Rik endonuclease V protein-coding common_peak2_285_2810_-0.0580650806115592_11.4278351980746_0.777918593405113 chr14 62759160 62761365 + 0.777918593405113 NA promoter-TSS (NR_045503) promoter-TSS (NR_045503) -239 NR_045503 71000 Mm.399410 NR_045503 ENSMUSG00000097775 4931440J10Rik - RIKEN cDNA 4931440J10 gene ncRNA common_peak2_57_423_-0.152644828864274_8.65159804013106_0.777674447803767 chr13 67127917 67129039 + 0.777674447803767 NA intron (NM_172392, intron 1 of 3) intron (NM_172392, intron 1 of 3) 250 NM_172392 268670 Mm.56274 NM_172392 ENSMUSG00000057396 Zfp759 BC028265|Rslcan-8|Rslcan8 zinc finger protein 759 protein-coding common_peak2_64_484_-0.144926416741594_8.84937772870369_0.777625368789117 chr14 46787461 46788864 + 0.777625368789117 NA intron (NM_009919, intron 1 of 4) CpG 195 NM_009919 12793 Mm.3261 NM_009919 ENSMUSG00000015759 Cnih1 0610007J15|CNIH-1|Cnih cornichon family AMPA receptor auxiliary protein 1 protein-coding common_peak2_74_572_-0.132241620467239_9.09627051852329_0.77732649704758-2 chr8 111299223 111300363 + 0.77732649704758 NA intron (NM_146218, intron 1 of 12) CpG 429 NM_146218 234736 Mm.334816 NM_146218 ENSMUSG00000033596 Rfwd3 BC027246 ring finger and WD repeat domain 3 protein-coding common_peak2_74_572_-0.132241620467239_9.09627051852329_0.77732649704758 chr5 62814943 62816564 + 0.77732649704758 NA intron (NM_001170705, intron 1 of 8) intron (NM_001170705, intron 1 of 8) 1930 NM_001170705 100322896 Mm.479821 NM_001170705 ENSMUSG00000090326 Dthd1 Gm17384 death domain containing 1 protein-coding common_peak1_119_996_-0.0995686394277797_9.91166537468431_0.777221562732015 chr10 88404397 88405947 + 0.777221562732015 NA intron (NM_001004164, intron 2 of 20) B2_Mm2|SINE|B2 25760 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak1_14_92_-0.357114689696683_6.36060146625969_0.777177389510743 chr7 3289203 3289566 + 0.777177389510743 NA intron (NM_001093764, intron 1 of 2) intron (NM_001093764, intron 1 of 2) 346 NM_001093764 50918 Mm.29874 NM_016969 ENSMUSG00000068566 Myadm D7Wsu62e myeloid-associated differentiation marker protein-coding unique_peak2_14_92_-0.357114689696683_6.36060146625969_0.777177389510743 chr19 29341839 29342671 + 0.777177389510743 NA Intergenic Intergenic -7585 NM_011272 19773 Mm.5033 NM_011272 ENSMUSG00000039097 Rln1 Rln|rlx relaxin 1 protein-coding common_peak1_14_92_-0.357114689696683_6.36060146625969_0.777177389510743-2 chr7 19815424 19815864 + 0.777177389510743 NA intron (NM_033601, intron 2 of 8) ZP3AR|Satellite|Satellite 7111 NM_033601 12051 Mm.439658 NM_033601 ENSMUSG00000053175 Bcl3 AI528691|Bcl-3 B cell leukemia/lymphoma 3 protein-coding common_peak1_256_2471_-0.0618613787476985_11.2405323385305_0.777138503064236 chr18 34776968 34778400 + 0.777138503064236 NA intron (NM_001081256, intron 1 of 23) CpG 676 NM_001081256 277250 Mm.277906 NM_029518 ENSMUSG00000038773 Kdm3b 5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082 KDM3B lysine (K)-specific demethylase 3B protein-coding unique_peak2_9_59_-0.442368679164099_5.68570625602647_0.777071856700052 chr3 59296963 59297416 + 0.777071856700052 NA intron (NM_177855, intron 40 of 43) intron (NM_177855, intron 40 of 43) -34358 NM_027571 70839 Mm.422675 NM_027571 ENSMUSG00000036353 P2ry12 2900079B22Rik|4921504D23Rik|P2Y12 purinergic receptor P2Y, G-protein coupled 12 protein-coding common_peak2_179_1613_-0.0770216033404374_10.6179140616076_0.777040578624634 chr2 180709170 180711232 + 0.777040578624634 NA promoter-TSS (NM_001289651) promoter-TSS (NM_001289651) -25 NM_001289652 76425 Mm.41464 NM_029607 ENSMUSG00000027573 Gid8 2310003C23Rik|4833420G11Rik|AI451474|Twa1 GID complex subunit 8 protein-coding common_peak2_53_311_0.163417659163702_8.3671110484441_0.776384672358311 chr7 35646721 35648001 + 0.776384672358311 NA exon (NM_019746, exon 1 of 6) exon (NM_019746, exon 1 of 6) 121 NM_019746 56330 Mm.371609 NM_019746 ENSMUSG00000030417 Pdcd5 2200003D22Rik|AA408513|Tfar19 programmed cell death 5 protein-coding common_peak1_53_311_0.163417659163702_8.3671110484441_0.776384672358311 chr8 84147271 84148136 + 0.776384672358311 NA promoter-TSS (NM_001163752) promoter-TSS (NM_001163752) 50 NM_145970 212139 Mm.41424 NM_145970 ENSMUSG00000036686 Cc2d1a BC016188|Freud-1|Tape coiled-coil and C2 domain containing 1A protein-coding common_peak1_126_933_0.0949319544643838_9.91474471694185_0.77623477508174 chr11 30953307 30954931 + 0.77623477508174 NA promoter-TSS (NM_023906) promoter-TSS (NM_023906) 12 NM_025745 66753 Mm.294641 NM_025745 ENSMUSG00000020311 Erlec1 4933407N01Rik endoplasmic reticulum lectin 1 protein-coding common_peak1_82_644_-0.123649481142268_9.27133060973948_0.776223745575177 chr1 161809180 161810020 + 0.776223745575177 NA Intergenic Lx9|LINE|L1 -21105 NM_010177 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_397_3918_0.0473242474315665_11.959931981318_0.775897792688533 chr10 80691358 80695372 + 0.775897792688533 NA intron (NM_172457, intron 1 of 3) ID_B1|SINE|B4 8455 NM_172457 208228 Mm.49309 NM_172457 ENSMUSG00000003348 Mob3a 5330417K06Rik|A630029F06|AV218468|Mobkl2a MOB kinase activator 3A protein-coding common_peak1_32_221_-0.217095918689227_7.68586790700549_0.775800832298104-2 chr3 90476108 90476638 + 0.775800832298104 NA intron (NM_026374, intron 1 of 13) CpG 172 NM_026374 67781 Mm.227258 NM_026374 ENSMUSG00000001016 Ilf2 6230405A16Rik|TEG-267|Tex261|Tex267 interleukin enhancer binding factor 2 protein-coding common_peak1_32_221_-0.217095918689227_7.68586790700549_0.775800832298104 chr1 176823623 176824075 + 0.775800832298104 NA intron (NM_029756, intron 1 of 17) intron (NM_029756, intron 1 of 17) 9189 NM_029756 76816 Mm.171399 NM_029756 ENSMUSG00000026504 Sdccag8 2700048G21Rik|5730470G24Rik|Cccap serologically defined colon cancer antigen 8 protein-coding common_peak2_32_221_-0.217095918689227_7.68586790700549_0.775800832298104 chr10 39624795 39625972 + 0.775800832298104 NA intron (NR_038037, intron 2 of 2) intron (NR_038037, intron 2 of 2) 12449 NM_134000 103213 Mm.436686 NM_134000 ENSMUSG00000019842 Traf3ip2 AI429613|Act1|CIKS TRAF3 interacting protein 2 protein-coding common_peak1_32_221_-0.217095918689227_7.68586790700549_0.775800832298104-3 chr5 92484998 92485593 + 0.775800832298104 NA exon (NM_007644, exon 2 of 12) exon (NM_007644, exon 2 of 12) 20362 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding common_peak2_88_593_0.118699247963422_9.27366874478248_0.775455613513092 chr5 109690023 109691518 + 0.775455613513092 NA Intergenic Intergenic -131777 NM_001164735 57914 Mm.35771 NM_016715 ENSMUSG00000033467 Crlf2 CRLM2|Ly114|Tpte2|Tslpr cytokine receptor-like factor 2 protein-coding common_peak1_88_593_0.118699247963422_9.27366874478248_0.775455613513092 chr15 86344449 86346431 + 0.775455613513092 NA intron (NM_145476, intron 8 of 12) intron (NM_145476, intron 8 of 12) 130981 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak1_46_332_-0.176247279645244_8.29125472724864_0.775427679418965 chr11 59418976 59419806 + 0.775427679418965 NA intron (NM_144521, intron 4 of 4) intron (NM_144521, intron 4 of 4) 30565 NM_144521 67826 Mm.26680 NM_144521 ENSMUSG00000009894 Snap47 1110031B06Rik|SNAP-47 synaptosomal-associated protein, 47 protein-coding common_peak1_44_315_-0.177602110612471_8.21497969287087_0.775096258297678 chr15 102721495 102722102 + 0.775096258297678 NA intron (NM_026192, intron 1 of 14) intron (NM_026192, intron 1 of 14) 380 NM_026192 67488 Mm.71682 NM_026192 ENSMUSG00000023055 Calcoco1 1810009B06Rik|Cocoa|Gcap11|mKIAA1536 calcium binding and coiled coil domain 1 protein-coding common_peak2_44_315_-0.177602110612471_8.21497969287087_0.775096258297678 chr10 81167086 81167910 + 0.775096258297678 NA intron (NM_021501, intron 1 of 10) CpG 222 NM_021501 59004 Mm.34428 NM_021501 ENSMUSG00000004934 Pias4 PIASY|Pias-gamma|Piasg protein inhibitor of activated STAT 4 protein-coding common_peak1_44_315_-0.177602110612471_8.21497969287087_0.775096258297678-2 chr7 29155624 29156287 + 0.775096258297678 NA exon (NM_001146023, exon 2 of 8) exon (NM_001146023, exon 2 of 8) 255 NM_001146023 73833 Mm.260890 NM_028661 ENSMUSG00000030590 Fam98c 1110006G06Rik|AI836081|AV026483|B230110F21Rik family with sequence similarity 98, member C protein-coding common_peak1_108_768_0.10490244756781_9.63929101174573_0.775050071717306 chr5 36829568 36830884 + 0.775050071717306 NA intron (NM_008550, intron 1 of 18) intron (NM_008550, intron 1 of 18) 423 NM_008550 17160 Mm.761 NM_008550 ENSMUSG00000029119 Man2b2 mKIAA0935 mannosidase 2, alpha B2 protein-coding common_peak2_117_850_0.0991233945422181_9.78257701895707_0.774858786299872 chr13 37641761 37643896 + 0.774858786299872 NA Intergenic LTR16E2|LTR|ERVL -183210 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_80_526_0.124682931355665_9.10400061731505_0.77472915521294 chr5 30647290 30648760 + 0.77472915521294 NA promoter-TSS (NR_049199) promoter-TSS (NR_049199) 86 NM_175675 74919 Mm.247985 NM_175675 ENSMUSG00000029175 Slc35f6 4930471M23Rik|5730478O19Rik|ANT2BP|P40|Tango9 solute carrier family 35, member F6 protein-coding common_peak1_60_365_0.14881961276293_8.59010964466551_0.774696334259764 chr11 117992056 117993000 + 0.774696334259764 NA intron (NM_133757, intron 1 of 9) intron (NM_133757, intron 1 of 9) 5671 NM_133757 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak2_60_365_0.14881961276293_8.59010964466551_0.774696334259764 chr2 92433409 92434926 + 0.774696334259764 NA promoter-TSS (NM_009963) promoter-TSS (NM_009963) -98 NM_009963 12953 Mm.254181 NM_009963 ENSMUSG00000068742 Cry2 AV006279|D130054K12Rik cryptochrome 2 (photolyase-like) protein-coding common_peak1_34_236_-0.207297534374725_7.7850944817109_0.774614345537842-2 chr19 6306161 6306866 + 0.774614345537842 NA promoter-TSS (NM_001033342) promoter-TSS (NM_001033342) 56 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak1_34_236_-0.207297534374725_7.7850944817109_0.774614345537842 chr17 46704464 46705143 + 0.774614345537842 NA intron (NM_009358, intron 1 of 14) CpG 199 NM_009358 21770 Mm.295009 NM_009358 ENSMUSG00000059409 Ppp2r5d B'delta|TEG-271|Tex271 protein phosphatase 2, regulatory subunit B', delta protein-coding common_peak2_34_236_-0.207297534374725_7.7850944817109_0.774614345537842 chr3 146784019 146785100 + 0.774614345537842 NA intron (NM_011100, intron 1 of 9) intron (NM_011100, intron 1 of 9) -3143 NM_001164200 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak1_27_131_0.242170630659472_7.16547943468819_0.774511462771856-2 chr9 108110973 108111513 + 0.774511462771856 NA exon (NM_007567, exon 5 of 12) exon (NM_007567, exon 5 of 12) -16763 NM_146226 235606 Mm.219639 NM_146226 ENSMUSG00000032590 Apeh - acylpeptide hydrolase protein-coding common_peak1_27_131_0.242170630659472_7.16547943468819_0.774511462771856 chr2 128197599 128198144 + 0.774511462771856 NA Intergenic Intergenic 70296 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_27_131_0.242170630659472_7.16547943468819_0.774511462771856-2 chr11 100411559 100412654 + 0.774511462771856 NA intron (NM_176830, intron 4 of 7) intron (NM_176830, intron 4 of 7) 2713 NM_176830 66180 Mm.4940 NM_176830 ENSMUSG00000006931 P3h4 1110036O03Rik|AI413214|Leprel4|Sc65 prolyl 3-hydroxylase family member 4 (non-enzymatic) protein-coding unique_peak2_27_131_0.242170630659472_7.16547943468819_0.774511462771856-2 chr5 123076240 123077291 + 0.774511462771856 NA intron (NM_001039723, intron 1 of 11) CpG 490 NM_001039723 330189 Mm.391872 NM_001039723 ENSMUSG00000054434 Tmem120b - transmembrane protein 120B protein-coding common_peak2_27_131_0.242170630659472_7.16547943468819_0.774511462771856 chr1 180196147 180196693 + 0.774511462771856 NA promoter-TSS (NM_023341) promoter-TSS (NM_023341) -400 NM_023341 67426 Mm.38330 NM_023341 ENSMUSG00000026489 Coq8a 4632432J16Rik|AI462003|Adck3|Cabc1|mKIAA0451 coenzyme Q8A protein-coding unique_peak2_27_131_0.242170630659472_7.16547943468819_0.774511462771856 chr3 14958775 14959698 + 0.774511462771856 NA Intergenic Intergenic -11965 NR_040549 77127 Mm.195792 NR_040549 ENSMUSG00000098008 A930001A20Rik - RIKEN cDNA A930001A20 gene ncRNA unique_peak2_20_133_-0.288614546659274_6.92178191712813_0.774458073648719 chr2 57120657 57121418 + 0.774458073648719 NA intron (NM_001139509, intron 1 of 7) intron (NM_001139509, intron 1 of 7) 2966 NM_001139509 18227 Mm.3507 NM_013613 ENSMUSG00000026826 Nr4a2 HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR nuclear receptor subfamily 4, group A, member 2 protein-coding common_peak1_20_133_-0.288614546659274_6.92178191712813_0.774458073648719-5 chr4 70249105 70249430 + 0.774458073648719 NA intron (NM_001313762, intron 25 of 33) CpG 161168 NM_001313762 214444 Mm.370777 NM_145990 ENSMUSG00000039298 Cdk5rap2 2900018K03Rik|an|mKIAA1633 CDK5 regulatory subunit associated protein 2 protein-coding common_peak1_20_133_-0.288614546659274_6.92178191712813_0.774458073648719 chr1 160905780 160906231 + 0.774458073648719 NA promoter-TSS (NM_001024952) promoter-TSS (NM_001024952) -406 NM_001024952 381305 Mm.329667 NM_001024952 ENSMUSG00000040423 Rc3h1 5730557L09Rik|Gm551|N28103|mKIAA2025 RING CCCH (C3H) domains 1 protein-coding common_peak1_20_133_-0.288614546659274_6.92178191712813_0.774458073648719-2 chr11 32539681 32540068 + 0.774458073648719 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 6608 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_20_133_-0.288614546659274_6.92178191712813_0.774458073648719-6 chr4 133649791 133650267 + 0.774458073648719 NA Intergenic LTR50|LTR|ERVL -16600 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak1_20_133_-0.288614546659274_6.92178191712813_0.774458073648719-4 chr17 23797697 23798229 + 0.774458073648719 NA Intergenic Intergenic -5224 NM_175229 75956 Mm.5222 NM_175229 ENSMUSG00000039218 Srrm2 5033413A03Rik|AA410130|SRm300|mKIAA0324 serine/arginine repetitive matrix 2 protein-coding common_peak1_20_133_-0.288614546659274_6.92178191712813_0.774458073648719-3 chr17 15023769 15024193 + 0.774458073648719 NA Intergenic CpG -13797 NM_198104 21647 Mm.440445 NM_011560 ENSMUSG00000079707 Tcte3 D17Leh117c|LC2|Tcte-3|Tctex-2|Tctex-4|Tctex2|Tctex4 t-complex-associated testis expressed 3 protein-coding common_peak2_96_774_-0.112714136798191_9.54169543176251_0.774325324617176 chr10 93177863 93181347 + 0.774325324617176 NA intron (NM_146239, intron 1 of 16) B2_Mm1t|SINE|B2 16820 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak2_156_1220_0.0836281494182458_10.2956615596965_0.774088890849758 chr17 78244537 78248156 + 0.774088890849758 NA intron (NM_015800, intron 2 of 16) intron (NM_015800, intron 2 of 16) 46098 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding common_peak1_142_1226_-0.0887291870804781_10.2165549401227_0.774081703007763 chr2 120976558 120978117 + 0.774081703007763 NA exon (NM_175285, exon 1 of 14) exon (NM_175285, exon 1 of 14) 275 NM_175285 96957 Mm.315212 NM_175285 ENSMUSG00000054484 Tmem62 B830009D23Rik|C77355 transmembrane protein 62 protein-coding common_peak2_199_1655_0.0723651681961286_10.7296695415974_0.77399604252043 chr2 155133000 155137021 + 0.77399604252043 NA intron (NM_001243712, intron 1 of 25) intron (NM_001243712, intron 1 of 25) 1529 NM_008395 16396 Mm.208286 NM_008395 ENSMUSG00000027598 Itch 6720481N21Rik|8030492O04Rik|A130065M08|AIP4|C230047C07Rik itchy, E3 ubiquitin protein ligase protein-coding common_peak2_133_998_0.0928151435436622_10.0107484395642_0.773616226757518 chr12 55464865 55466904 + 0.773616226757518 NA intron (NR_035430, intron 1 of 3) intron (NR_035430, intron 1 of 3) 26763 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak1_17_112_-0.315493600542521_6.66243216214393_0.773608659349739-2 chr16 46021795 46022273 + 0.773608659349739 NA Intergenic Intergenic -11621 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding unique_peak2_17_112_-0.315493600542521_6.66243216214393_0.773608659349739 chr4 132076882 132077539 + 0.773608659349739 NA Intergenic Intergenic -1897 NM_001128607 269587 Mm.30038 NM_183428 ENSMUSG00000028906 Epb41 4.1R|AI415518|D4Ertd442e|Elp-1|Elp1|Epb4.1|mKIAA4056 erythrocyte membrane protein band 4.1 protein-coding common_peak1_17_112_-0.315493600542521_6.66243216214393_0.773608659349739 chr11 57685468 57685875 + 0.773608659349739 NA intron (NM_134189, intron 1 of 11) intron (NM_134189, intron 1 of 11) 40229 NM_134189 171212 Mm.271670 NM_134189 ENSMUSG00000020520 Galnt10 AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 protein-coding common_peak1_13_51_0.359512720690478_5.88019607848633_0.773583383841042 chr1 131196926 131197336 + 0.773583383841042 NA intron (NM_018750, intron 2 of 5) intron (NM_018750, intron 2 of 5) 3054 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak1_13_51_0.359512720690478_5.88019607848633_0.773583383841042-2 chr13 114913635 114914038 + 0.773583383841042 NA intron (NM_008396, intron 1 of 29) intron (NM_008396, intron 1 of 29) 18205 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_13_51_0.359512720690478_5.88019607848633_0.773583383841042-3 chr6 147042456 147042804 + 0.773583383841042 NA promoter-TSS (NM_145573) promoter-TSS (NM_145573) -140 NM_145573 232536 Mm.46656 NM_145573 ENSMUSG00000040112 Mrps35 MDSO23|MRP-S28|MRPS28 mitochondrial ribosomal protein S35 protein-coding common_peak1_38_267_-0.193145740849912_7.96951632003282_0.773374582143635-2 chr7 30552511 30553179 + 0.773374582143635 NA promoter-TSS (NM_001012401) promoter-TSS (NM_001012401) 17 NR_128568 104795949 NR_128568 ENSMUSG00000106236 Gm38670 Mir9769|mir-9769|mmu-mir-9769 predicted gene, 38670 ncRNA common_peak1_38_267_-0.193145740849912_7.96951632003282_0.773374582143635 chr5 144965425 144965825 + 0.773374582143635 NA 5' UTR (NM_001038627, exon 1 of 18) 5' UTR (NM_001038627, exon 1 of 18) 205 NM_029438 75788 Mm.27735 NM_029438 ENSMUSG00000038780 Smurf1 4930431E10Rik|mKIAA1625 SMAD specific E3 ubiquitin protein ligase 1 protein-coding common_peak1_72_554_-0.134024934851841_9.04933149381155_0.773179399316235 chr11 61493517 61494615 + 0.773179399316235 NA 5' UTR (NM_001291037, exon 1 of 6) 5' UTR (NM_001291037, exon 1 of 6) 200 NM_001291037 23939 Mm.38172 NM_011841 ENSMUSG00000001034 Mapk7 BMK-1|BMK1|ERK-5|ERK5|Erk5-T|PRKM7 mitogen-activated protein kinase 7 protein-coding common_peak1_139_1195_-0.0893313373018589_10.1793360055472_0.773134489450106 chr11 84178846 84180704 + 0.773134489450106 NA Intergenic CpG -12299 NM_001037932 628813 Mm.390389 NM_001037932 ENSMUSG00000051452 Gm11437 AI463690|OTTMUSG00000000997 predicted gene 11437 protein-coding common_peak2_65_404_0.142154161075249_8.73285517830961_0.773035018387984 chr10 80668044 80670617 + 0.773035018387984 NA exon (NM_021462, exon 8 of 14) exon (NM_021462, exon 8 of 14) 6963 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak1_65_404_0.142154161075249_8.73285517830961_0.773035018387984 chr1 127626711 127628099 + 0.773035018387984 NA intron (NM_028135, intron 2 of 7) intron (NM_028135, intron 2 of 7) 50616 NM_028135 72160 Mm.281287 NM_028135 ENSMUSG00000026347 Tmem163 2610024A01Rik|SV31 transmembrane protein 163 protein-coding common_peak2_67_510_-0.140418597590738_8.92697018214225_0.77295456002209 chr8 105622556 105624042 + 0.77295456002209 NA Intergenic Intergenic 7833 NR_035492 100316712 NR_035492 ENSMUSG00000089432 Mir1966 mir-1966|mmu-mir-1966 microRNA 1966 ncRNA common_peak2_105_859_-0.105838772959991_9.69527346310946_0.772622746226659 chrX 103480538 103483718 + 0.772622746226659 NA non-coding (NR_002844, exon 4 of 4) non-coding (NR_002844, exon 4 of 4) 1105 NR_001570 213742 Mm.274770 NR_001463 ENSMUSG00000086503 Xist A430022B11|AI314753 inactive X specific transcripts ncRNA common_peak1_36_252_-0.2032099234829_7.88138861295286_0.772490651608286 chr4 119195241 119195807 + 0.772490651608286 NA promoter-TSS (NM_001038998) promoter-TSS (NM_001038998) -1 NM_001038998 69216 Mm.36697 NM_024462 ENSMUSG00000028643 Svbp 2410005K17Rik|AI851162|Ccdc23 small vasohibin binding protein protein-coding unique_peak2_36_252_-0.2032099234829_7.88138861295286_0.772490651608286 chr11 97710495 97711989 + 0.772490651608286 NA exon (NM_011971, exon 4 of 6) exon (NM_011971, exon 4 of 6) 7808 NM_011971 26446 Mm.21874 NM_011971 ENSMUSG00000069744 Psmb3 AL033320|C10-II proteasome (prosome, macropain) subunit, beta type 3 protein-coding common_peak2_36_252_-0.2032099234829_7.88138861295286_0.772490651608286 chr19 8785665 8786849 + 0.772490651608286 NA promoter-TSS (NM_146092) promoter-TSS (NM_146092) 59 NM_146092 225895 Mm.220886 NM_146092 ENSMUSG00000003680 Taf6l 2810417N14Rik|BB223262|C530024J06Rik|Paf65a TATA-box binding protein associated factor 6 like protein-coding unique_peak2_51_297_0.162865035365126_8.30060103814473_0.772416938862241 chr2 128249869 128251468 + 0.772416938862241 NA Intergenic Intergenic 123093 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak1_114_946_-0.100654224496555_9.83689350322011_0.772341043807898 chr13 23544379 23545360 + 0.772341043807898 NA TTS (NM_013548) TTS (NM_013548) 817 NM_013548 260423 Mm.221389 NM_013548 ENSMUSG00000100210 Hist1h3f H3.2-221|Hist1 histone cluster 1, H3f protein-coding common_peak1_114_946_-0.100654224496555_9.83689350322011_0.772341043807898-2 chrX 42067866 42069313 + 0.772341043807898 NA non-coding (NR_125870, exon 1 of 6) non-coding (NR_125870, exon 1 of 6) 191 NR_125870 11798 Mm.259879 NM_009688 ENSMUSG00000025860 Xiap 1110015C02Rik|Aipa|Api3|Birc4|IAP3|ILP-1|MIHA X-linked inhibitor of apoptosis protein-coding common_peak2_143_1094_0.0878071409432_10.1406187249601_0.772328479599074 chrX 23692187 23694678 + 0.772328479599074 NA 5' UTR (NM_175180, exon 1 of 20) 5' UTR (NM_175180, exon 1 of 20) 381 NM_001305675 72404 Mm.423 NM_175180 ENSMUSG00000036769 Wdr44 2610034K17Rik|RAB11BP|RPH11 WD repeat domain 44 protein-coding common_peak1_94_645_0.113079435581287_9.39193007248457_0.77228879730162 chr4 140956928 140957997 + 0.77228879730162 NA intron (NR_045911, intron 1 of 3) intron (NR_045911, intron 1 of 3) 440 NR_045911 100126227 Mm.404073 NR_045911 ENSMUSG00000087698 Gm13031 OTTMUSG00000010081 predicted gene 13031 ncRNA common_peak2_108_888_-0.104297373300133_9.7438909221797_0.772269261122204 chr5 134605773 134609089 + 0.772269261122204 NA intron (NM_022964, intron 3 of 11) intron (NM_022964, intron 3 of 11) 7594 NM_022964 56743 Mm.391375 NM_020044 ENSMUSG00000040751 Lat2 AW125574|LAB|NTAL|WSCR5|Wbscr15|Wbscr5 linker for activation of T cells family, member 2 protein-coding unique_peak2_25_169_-0.25396969149677_7.28240609038932_0.772061746286592 chr17 44717676 44718971 + 0.772061746286592 NA intron (NR_073392, intron 3 of 7) intron (NR_073392, intron 3 of 7) 17853 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_25_169_-0.25396969149677_7.28240609038932_0.772061746286592-2 chr18 36017796 36018252 + 0.772061746286592 NA exon (NM_001167891, exon 10 of 10) exon (NM_001167891, exon 10 of 10) 53194 NR_110349 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding common_peak1_25_169_-0.25396969149677_7.28240609038932_0.772061746286592 chr1 173535356 173536036 + 0.772061746286592 NA 5' UTR (NM_001024721, exon 1 of 5) 5' UTR (NM_001024721, exon 1 of 5) 261 NM_001024721 545384 Mm.371698 NM_001024721 ENSMUSG00000070501 Ifi214 Pyhin-B|p214 interferon activated gene 214 protein-coding unique_peak2_25_169_-0.25396969149677_7.28240609038932_0.772061746286592-2 chr2 93760570 93761844 + 0.772061746286592 NA intron (NM_010163, intron 8 of 13) L1M2|LINE|L1 61361 NM_010163 14043 Mm.4336 NM_010163 ENSMUSG00000027198 Ext2 AI893565 exostoses (multiple) 2 protein-coding common_peak1_196_1624_0.0728826138221201_10.7026653097142_0.771794748879322 chr4 135097342 135099482 + 0.771794748879322 NA Intergenic Intergenic -22233 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_247_2169_0.0630398109615324_11.1149992328126_0.771194958170004 chr12 21225110 21228148 + 0.771194958170004 NA intron (NM_001135192, intron 13 of 28) intron (NM_001135192, intron 13 of 28) 59608 NM_008403 16413 Mm.273333 NM_008403 ENSMUSG00000062352 Itgb1bp1 AI449260|AU019480|Icap1 integrin beta 1 binding protein 1 protein-coding common_peak1_22_101_0.266035462122015_6.8054430730325_0.770980376636119-2 chr11 98204237 98204740 + 0.770980376636119 NA intron (NM_001109626, intron 1 of 13) intron (NM_001109626, intron 1 of 13) 1183 NM_001109626 69131 Mm.260516 NM_026952 ENSMUSG00000003119 Cdk12 1810022J16Rik|AI646528|Crk7|Crkrs|D11Ertd752e|Pksc cyclin-dependent kinase 12 protein-coding common_peak2_22_101_0.266035462122015_6.8054430730325_0.770980376636119 chr15 97329579 97330195 + 0.770980376636119 NA intron (NM_172293, intron 3 of 5) B2_Mm2|SINE|B2 -82600 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_22_101_0.266035462122015_6.8054430730325_0.770980376636119 chr10 130412225 130412562 + 0.770980376636119 NA Intergenic Intergenic 17219 NM_001102602 623734 Mm.469840 NM_001102602 ENSMUSG00000092048 Vmn2r85 EG623734 vomeronasal 2, receptor 85 protein-coding common_peak1_200_1666_0.0716398273165879_10.7388583026447_0.770951145857265 chr14 122106443 122107845 + 0.770951145857265 NA promoter-TSS (NR_015586) promoter-TSS (NR_015586) 62 NM_080556 68059 Mm.275191 NM_080556 ENSMUSG00000025544 Tm9sf2 1500001N15Rik|AA536814|D14Ertd64e|P76 transmembrane 9 superfamily member 2 protein-coding common_peak2_86_576_0.120370322020371_9.23261266965567_0.770663642229813 chr5 33781830 33783552 + 0.770663642229813 NA promoter-TSS (NM_019694) promoter-TSS (NM_019694) 13 NM_019694 56384 Mm.260538 NM_019694 ENSMUSG00000005299 Letm1 - leucine zipper-EF-hand containing transmembrane protein 1 protein-coding common_peak2_86_576_0.120370322020371_9.23261266965567_0.770663642229813-2 chr6 47680597 47682199 + 0.770663642229813 NA promoter-TSS (NR_002841).6 promoter-TSS (NR_002841).6 -340 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_75_580_-0.128805527634926_9.11799158958707_0.770462655806683 chr11 23632783 23634342 + 0.770462655806683 NA promoter-TSS (NM_027860) promoter-TSS (NM_027860) 69 NM_027860 71675 Mm.48031 NM_027860 ENSMUSG00000042208 0610010F05Rik Kiaa1841|mKIAA1841 RIKEN cDNA 0610010F05 gene protein-coding common_peak1_174_1559_-0.0777790123477562_10.5684408075757_0.770200889723306 chr7 128050924 128052571 + 0.770200889723306 NA Intergenic RLTR19B|LTR|ERVK -10893 NM_001082960 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak2_311_3119_-0.0545499305826809_11.5800553484583_0.770071498479581 chr10 68508613 68514328 + 0.770071498479581 NA intron (NM_028491, intron 4 of 7) URR1B|DNA|hAT-Charlie 30405 NM_028491 73287 Mm.141830 NM_028491 ENSMUSG00000019945 1700040L02Rik - RIKEN cDNA 1700040L02 gene protein-coding common_peak2_103_724_0.106808682111348_9.55524152595797_0.769920460418541 chr6 47743771 47745393 + 0.769920460418541 NA promoter-TSS (NR_002841).5 promoter-TSS (NR_002841).5 -351 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_599_6531_0.0366775662870413_12.6916478587052_0.769786023271982 chr1 132006695 132010817 + 0.769786023271982 NA intron (NM_007923, intron 1 of 4) intron (NM_007923, intron 1 of 4) 1151 NM_007923 13714 Mm.254233 NM_007923 ENSMUSG00000026436 Elk4 2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1 ELK4, member of ETS oncogene family protein-coding common_peak1_127_1074_-0.094030747792587_10.0231055705805_0.769527083945746 chr16 17722001 17723066 + 0.769527083945746 NA intron (NM_001285886, intron 1 of 16) intron (NM_001285886, intron 1 of 16) 367 NM_001285886 94112 Mm.208970 NM_033609 ENSMUSG00000012114 Med15 A230074L19Rik|AW536074|Pcqap|mPcqap mediator complex subunit 15 protein-coding common_peak1_63_388_0.145851540511687_8.67655211524204_0.769509475432903 chr6 88841275 88841962 + 0.769509475432903 NA TTS (NM_176973) TTS (NM_176973) 317 NM_030251 80283 Mm.166858 NM_030251 ENSMUSG00000030083 Abtb1 AI847549|BC003234|BPOZ|EF1ABP ankyrin repeat and BTB (POZ) domain containing 1 protein-coding common_peak1_312_2903_0.0546174579984626_11.531134466995_0.769508045089278 chr7 59227628 59230179 + 0.769508045089278 NA 5' UTR (NM_173010, exon 1 of 9) 5' UTR (NM_173010, exon 1 of 9) 151 NM_011668 22215 Mm.9002 NM_011668 ENSMUSG00000025326 Ube3a 4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216 ubiquitin protein ligase E3A protein-coding common_peak1_382_3735_0.0483315572187575_11.891444518319_0.769299105882552 chr15 73148620 73151884 + 0.769299105882552 NA intron (NM_153178, intron 1 of 18) A-rich|Low_complexity|Low_complexity 34695 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_29_144_0.228747342582769_7.29428276130632_0.769054635187193 chr7 125580667 125581328 + 0.769054635187193 NA Intergenic Intergenic -22432 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak2_29_144_0.228747342582769_7.29428276130632_0.769054635187193 chr11 101143637 101144303 + 0.769054635187193 NA Intergenic Intergenic -11914 NM_134028 103768 Mm.142348 NM_134028 ENSMUSG00000045007 Tubg2 AI504772|Tubgl tubulin, gamma 2 protein-coding unique_peak2_19_83_0.298816804852016_6.54172582520477_0.768917376478913-2 chr5 140208689 140209454 + 0.768917376478913 NA intron (NM_010752, intron 10 of 17) intron (NM_010752, intron 10 of 17) 112481 NM_010752 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 MAD1 mitotic arrest deficient 1-like 1 protein-coding common_peak1_19_83_0.298816804852016_6.54172582520477_0.768917376478913-4 chr7 79391527 79391980 + 0.768917376478913 NA promoter-TSS (NM_145946) promoter-TSS (NM_145946) -585 NM_145946 208836 Mm.349493 NM_145946 ENSMUSG00000039187 Fanci - Fanconi anemia, complementation group I protein-coding common_peak1_19_83_0.298816804852016_6.54172582520477_0.768917376478913-3 chr6 129755485 129756010 + 0.768917376478913 NA Intergenic Charlie1|DNA|hAT-Charlie -15263 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding unique_peak2_19_83_0.298816804852016_6.54172582520477_0.768917376478913 chr14 62940322 62940983 + 0.768917376478913 NA intron (NM_175546, intron 6 of 11) intron (NM_175546, intron 6 of 11) 43858 NM_001037751 432867 Mm.99387 NM_001037751 ENSMUSG00000075574 Defb48 Defb42|EG432867 defensin beta 48 protein-coding common_peak1_19_83_0.298816804852016_6.54172582520477_0.768917376478913 chr15 80639733 80640192 + 0.768917376478913 NA intron (NM_001289442, intron 4 of 7) ORR1C2|LTR|ERVL-MaLR -6111 NR_105922 102466773 NR_105922 ENSMUSG00000098631 Mir6957 Gm27895|mmu-mir-6957 microRNA 6957 ncRNA common_peak1_19_83_0.298816804852016_6.54172582520477_0.768917376478913-2 chr17 26506371 26506787 + 0.768917376478913 NA exon (NM_013642, exon 4 of 4) exon (NM_013642, exon 4 of 4) 1893 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak1_124_1044_-0.0951664479535417_9.98170400299147_0.768913980490963 chr11 87422011 87423210 + 0.768913980490963 NA intron (NM_031386, intron 1 of 30) intron (NM_031386, intron 1 of 30) -4981 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak2_175_1409_0.0781552289668639_10.5005570617696_0.768887760273472 chr6 124964737 124966535 + 0.768887760273472 NA promoter-TSS (NM_012003) promoter-TSS (NM_012003) -107 NM_001164089 26894 Mm.244536 NM_012003 ENSMUSG00000030127 Cops7a D6Ertd35e COP9 signalosome subunit 7A protein-coding common_peak1_97_783_-0.111221296018167_9.55909919610612_0.768676950883841 chr1 173434616 173436144 + 0.768676950883841 NA intron (NM_001013779, intron 2 of 8) intron (NM_001013779, intron 2 of 8) 14776 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_89_602_0.116776756850903_9.29440257032554_0.768652603027321 chr13 43176035 43177665 + 0.768652603027321 NA Intergenic Intergenic -5349 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak2_89_602_0.116776756850903_9.29440257032554_0.768652603027321 chr1 54896006 54898550 + 0.768652603027321 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 29109 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_27_183_-0.236997206039088_7.40506335303747_0.76848759887341 chr11 69665495 69666062 + 0.76848759887341 NA exon (NM_001291058, exon 2 of 6) exon (NM_001291058, exon 2 of 6) 392 NM_001291058 12514 Mm.15819 NM_009853 ENSMUSG00000018774 Cd68 Lamp4|Scard1|gp110 CD68 antigen protein-coding common_peak2_56_334_0.156481434205038_8.46625800244765_0.768425555393974 chr15 98927196 98929205 + 0.768425555393974 NA Intergenic B2_Mm2|SINE|B2 6190 NM_011654 22143 Mm.392113 NM_011654 ENSMUSG00000023004 Tuba1b Tuba2 tubulin, alpha 1B protein-coding common_peak1_100_811_-0.108487723579719_9.61109205539532_0.768198054437031 chr4 155563695 155564595 + 0.768198054437031 NA intron (NM_001159637, intron 1 of 11) CpG 330 NM_001159637 192185 Mm.28347 NM_138671 ENSMUSG00000029063 Nadk 4432404C02Rik|BC004012 NAD kinase protein-coding common_peak2_100_811_-0.108487723579719_9.61109205539532_0.768198054437031 chr7 143627400 143629544 + 0.768198054437031 NA promoter-TSS (NM_175649) promoter-TSS (NM_175649) -627 NM_175649 244237 Mm.247498 NM_175649 ENSMUSG00000045362 Tnfrsf26 Tnfrh3|Tnfrsf24 tumor necrosis factor receptor superfamily, member 26 protein-coding common_peak1_161_1270_0.0812060791742759_10.3523513545921_0.768188979613368 chr17 6429078 6431531 + 0.768188979613368 NA intron (NM_009342, intron 1 of 4) intron (NM_009342, intron 1 of 4) 192 NM_009342 21648 Mm.1948 NM_009342 ENSMUSG00000096255 Dynlt1b AGS2|Dynlt1|Tctex-1|Tctex1 dynein light chain Tctex-type 1B protein-coding common_peak2_106_868_-0.104241947458627_9.71109139308509_0.767555730381521 chr9 54950083 54951740 + 0.767555730381521 NA promoter-TSS (NM_011966) promoter-TSS (NM_011966) 43 NM_145229 246735 Mm.473773 NM_145229 ENSMUSG00000044820 AY074887 Mcpr1 cDNA sequence AY074887 protein-coding common_peak1_248_2378_-0.0624991711035037_11.1848899708734_0.767447389724863 chr1 40475910 40478167 + 0.767447389724863 NA intron (NM_001161843, intron 4 of 9) intron (NM_001161843, intron 4 of 9) 11032 NM_008365 16182 Mm.253664 NM_008365 ENSMUSG00000026070 Il18r1 Il18ralpha|Il1rrp interleukin 18 receptor 1 protein-coding common_peak2_58_432_-0.152696809684899_8.68187480988427_0.767227777912051 chr5 114442540 114444734 + 0.767227777912051 NA promoter-TSS (NM_001306205) promoter-TSS (NM_001306205) 390 NM_029956 77697 Mm.105182 NM_029956 ENSMUSG00000029575 Mmab 9130222L19Rik|ATR methylmalonic aciduria (cobalamin deficiency) cblB type homolog (human) protein-coding common_peak1_209_1761_0.0691943329427609_10.8175953753918_0.766890054895501 chr14 64440039 64441773 + 0.766890054895501 NA 5' UTR (NM_001253715, exon 1 of 5) 5' UTR (NM_001253715, exon 1 of 5) 120 NM_001253715 110265 Mm.26713 NM_026322 ENSMUSG00000054733 Msra 2310045J23Rik|6530413P12Rik|MSR-A methionine sulfoxide reductase A protein-coding common_peak2_287_2616_0.057436397570056_11.3824164078331_0.766713684240923 chr13 6632295 6638172 + 0.766713684240923 NA intron (NM_001291071, intron 2 of 21) intron (NM_001291071, intron 2 of 21) 13538 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding common_peak1_158_1240_0.0825888814660409_10.3185818408634_0.766677890096014 chr2 4881487 4882776 + 0.766677890096014 NA intron (NM_175400, intron 1 of 8) CpG 567 NM_175400 109079 Mm.34329 NM_175400 ENSMUSG00000026662 Sephs1 1110046B24Rik|AA589574|AI505014|AW111620|SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding common_peak2_49_356_-0.167152760706358_8.39620388367592_0.766500241775122 chr6 129672111 129674188 + 0.766500241775122 NA intron (NM_001288664, intron 5 of 5) Lx3_Mus|LINE|L1 5824 NM_001288664 16641 Mm.56899 NM_010652 ENSMUSG00000030167 Klrc1 CD159a|NKG2A|NKG2B killer cell lectin-like receptor subfamily C, member 1 protein-coding common_peak2_49_356_-0.167152760706358_8.39620388367592_0.766500241775122-2 chr9 60990912 60992418 + 0.766500241775122 NA Intergenic Intergenic -25404 NR_040767 330956 Mm.207985 NR_040767 ENSMUSG00000111290 Gm5122 A430102L10 predicted gene 5122 ncRNA common_peak1_49_356_-0.167152760706358_8.39620388367592_0.766500241775122 chr5 134688067 134688639 + 0.766500241775122 NA exon (NM_010717, exon 1 of 16) exon (NM_010717, exon 1 of 16) 237 NM_010717 16885 Mm.15409 NM_010717 ENSMUSG00000029674 Limk1 KIZ-1|LIMK-1|Limk LIM-domain containing, protein kinase protein-coding common_peak2_45_253_0.1763884285077_8.07687890102602_0.766193569948506 chr3 152763028 152764003 + 0.766193569948506 NA intron (NM_025662, intron 9 of 10) Lx8|LINE|L1 49415 NM_025662 329777 Mm.331447 NM_025662 ENSMUSG00000039047 Pigk 3000001O05Rik phosphatidylinositol glycan anchor biosynthesis, class K protein-coding common_peak2_76_493_0.128354309188389_9.01254438617887_0.765544894865726 chr9 110709450 110710788 + 0.765544894865726 NA intron (NM_028312, intron 4 of 6) intron (NM_028312, intron 4 of 6) 32491 NM_001083936 19228 Mm.3542 NM_011199 ENSMUSG00000032492 Pth1r PPR|Pthr|Pthr1 parathyroid hormone 1 receptor protein-coding common_peak1_471_4847_0.04218935512794_12.2642686610369_0.765069635611944 chr11 101662028 101666700 + 0.765069635611944 NA Intergenic PB1D7|SINE|Alu -1177 NM_025404 80981 Mm.266840 NM_025404 ENSMUSG00000034936 Arl4d 1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5 ADP-ribosylation factor-like 4D protein-coding common_peak2_56_414_-0.152468806684114_8.62073312289223_0.765057705326089 chr7 66059788 66061244 + 0.765057705326089 NA 5' UTR (NM_021336, exon 1 of 9) 5' UTR (NM_021336, exon 1 of 9) 180 NM_021336 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding common_peak1_16_67_0.316073419723833_6.24549955111226_0.764984435653934 chr10 95562638 95563060 + 0.764984435653934 NA intron (NM_027722, intron 1 of 4) intron (NM_027722, intron 1 of 4) 1318 NM_027722 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak1_16_67_0.316073419723833_6.24549955111226_0.764984435653934-3 chr8 36158683 36159095 + 0.764984435653934 NA Intergenic Intergenic 64061 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding unique_peak2_13_85_-0.366312315870528_6.24310859676683_0.764984435653934 chr17 47516779 47517471 + 0.764984435653934 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 12074 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding unique_peak2_16_67_0.316073419723833_6.24549955111226_0.764984435653934 chr11 86993220 86993796 + 0.764984435653934 NA intron (NM_001005341, intron 1 of 4) CpG 254 NM_001005341 77864 Mm.191894 NM_001005341 ENSMUSG00000018427 Ypel2 6430570G24|E130113K08Rik yippee-like 2 (Drosophila) protein-coding unique_peak2_13_85_-0.366312315870528_6.24310859676683_0.764984435653934-3 chr8 72272639 72273314 + 0.764984435653934 NA Intergenic Intergenic 32844 NM_007456 11767 Mm.290086 NM_007456 ENSMUSG00000003033 Ap1m1 AA408894|AP47|Adtm1A|Cltnm|mu1A adaptor-related protein complex AP-1, mu subunit 1 protein-coding common_peak1_16_67_0.316073419723833_6.24549955111226_0.764984435653934-2 chr15 79027788 79028211 + 0.764984435653934 NA promoter-TSS (NM_008197) promoter-TSS (NM_008197) -213 NM_008197 14958 Mm.24350 NM_008197 ENSMUSG00000096210 H1f0 D130017D06Rik|H1(0)|H1fv H1 histone family, member 0 protein-coding unique_peak2_13_85_-0.366312315870528_6.24310859676683_0.764984435653934-2 chr4 150916819 150917575 + 0.764984435653934 NA Intergenic MTE2b|LTR|ERVL-MaLR -2958 NM_011612 21942 Mm.244187 NM_011612 ENSMUSG00000028965 Tnfrsf9 4-1BB|A930040I11Rik|AA408498|AI325004|CDw137|Cd137|ILA|Ly63 tumor necrosis factor receptor superfamily, member 9 protein-coding common_peak1_16_67_0.316073419723833_6.24549955111226_0.764984435653934-4 chr9 120036928 120037323 + 0.764984435653934 NA Intergenic MIR3|SINE|MIR -13527 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak2_16_67_0.316073419723833_6.24549955111226_0.764984435653934 chr17 88402991 88403503 + 0.764984435653934 NA Intergenic Intergenic -37465 NM_180974 14236 Mm.112824 NM_180974 ENSMUSG00000034998 Foxn2 3230402J05Rik|6030465J18Rik|Fkh19|Foxn1|HTLF forkhead box N2 protein-coding common_peak2_217_2027_-0.067487390287349_10.9520982418597_0.764962214459158 chr18 76240473 76242770 + 0.764962214459158 NA promoter-TSS (NM_010754) promoter-TSS (NM_010754) -80 NM_010754 17126 Mm.152699 NM_010754 ENSMUSG00000024563 Smad2 7120426M23Rik|Madh2|Madr2|Smad-2|mMad2 SMAD family member 2 protein-coding common_peak1_22_147_-0.27099256153544_7.07395708486123_0.76488941704003 chr8 40584179 40584690 + 0.76488941704003 NA intron (NM_001040699, intron 6 of 13) intron (NM_001040699, intron 6 of 13) 50358 NM_001040699 54384 Mm.294871 NM_019433 ENSMUSG00000039431 Mtmr7 - myotubularin related protein 7 protein-coding common_peak1_206_1729_0.0701735138759911_10.7916430794621_0.764711940013395 chr4 32342716 32344722 + 0.764711940013395 NA Intergenic Intergenic -73716 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_71_452_0.134542744199145_8.89063861214581_0.764558022492436 chr17 80061413 80062469 + 0.764558022492436 NA exon (NM_144802, exon 1 of 13) exon (NM_144802, exon 1 of 13) 327 NM_144802 72692 Mm.64579 NM_144802 ENSMUSG00000024095 Hnrnpll 2510028H02Rik|2810036L13Rik|AI256697|AI852082|Hnrpll heterogeneous nuclear ribonucleoprotein L-like protein-coding common_peak1_66_412_0.140545728730277_8.76027083578458_0.764317209099156 chr8 105297477 105298398 + 0.764317209099156 NA intron (NM_148952, intron 1 of 9) CpG 274 NM_148952 104394 Mm.34554 NM_148952 ENSMUSG00000014859 E2f4 2010111M04Rik|AI427446 E2F transcription factor 4 protein-coding common_peak2_43_239_0.179519458271789_7.99665032474441_0.764118035027155 chr17 23546443 23547492 + 0.764118035027155 NA Intergenic CpG -3832 NR_126485 320020 Mm.445111 NR_126484 6330415G19Rik - RIKEN cDNA 6330415G19 gene ncRNA common_peak1_29_198_-0.227968187945946_7.52264052657068_0.764095434244341 chr11 70807746 70808415 + 0.764095434244341 NA intron (NM_001045526, intron 1 of 4) LTR85a|LTR|Gypsy? 4481 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak1_33_170_0.212296057274629_7.52400054352321_0.764095434244341 chr7 142356653 142357485 + 0.764095434244341 NA intron (NM_177265, intron 2 of 3) intron (NM_177265, intron 2 of 3) 15190 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_29_198_-0.227968187945946_7.52264052657068_0.764095434244341-2 chr8 35587589 35588270 + 0.764095434244341 NA 5' UTR (NM_001081279, exon 1 of 3) 5' UTR (NM_001081279, exon 1 of 3) 131 NM_001081279 52065 Mm.103246 NM_001081279 ENSMUSG00000070056 Mfhas1 2310066G09Rik|D8Ertd91e malignant fibrous histiocytoma amplified sequence 1 protein-coding common_peak2_110_787_0.10186634790832_9.67298499341054_0.764014737563439 chr4 155085301 155087036 + 0.764014737563439 NA promoter-TSS (NM_001081100) promoter-TSS (NM_001081100) 129 NM_026395 67830 Mm.241604 NM_026395 ENSMUSG00000029048 Rer1 1110060F11Rik|5830454N22Rik|AU043380 retention in endoplasmic reticulum sorting receptor 1 protein-coding common_peak2_87_585_0.118265510644415_9.25388960974445_0.763736235150822 chr4 138434016 138435462 + 0.763736235150822 NA promoter-TSS (NM_026689) promoter-TSS (NM_026689) 67 NM_026689 68350 Mm.103413 NM_026689 ENSMUSG00000041241 Mul1 0610009K11Rik|AV000801|Gide mitochondrial ubiquitin ligase activator of NFKB 1 protein-coding common_peak2_132_990_0.0911590654758729_9.99832077992442_0.763423689028121 chr11 5443280 5445777 + 0.763423689028121 NA exon (NM_001080924, exon 1 of 9) exon (NM_001080924, exon 1 of 9) 319 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding common_peak2_173_1390_0.0775034373099697_10.4806584231972_0.763342055777682 chr9 53666327 53667783 + 0.763342055777682 NA exon (NM_027807, exon 1 of 19) exon (NM_027807, exon 1 of 19) 452 NM_001161618 75717 Mm.218910 NM_027807 ENSMUSG00000032030 Cul5 4921514I20Rik|8430423K24Rik|AI852817|C030032G03Rik|C330021I08Rik|VACM-1|VACM1 cullin 5 protein-coding common_peak1_159_1250_0.0821050870240239_10.3299186176778_0.763058801116899 chr10 20118488 20120709 + 0.763058801116899 NA intron (NM_008580, intron 23 of 29) intron (NM_008580, intron 23 of 29) -29322 NM_008635 17761 Mm.20928 NM_008635 ENSMUSG00000019996 Map7 E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste microtubule-associated protein 7 protein-coding common_peak1_24_113_0.253125177971643_6.95945260315056_0.763017141132993 chr4 59035041 59035678 + 0.763017141132993 NA intron (NM_025277, intron 1 of 2) CpG 203 NM_025277 14700 Mm.41780 NM_025277 ENSMUSG00000038607 Gng10 AV006524 guanine nucleotide binding protein (G protein), gamma 10 protein-coding common_peak2_24_113_0.253125177971643_6.95945260315056_0.763017141132993 chr2 119617876 119618531 + 0.763017141132993 NA promoter-TSS (NM_133851) promoter-TSS (NM_133851) -95 NM_133851 108907 Mm.290015 NM_133851 ENSMUSG00000027306 Nusap1 2610201A12Rik|AI481307|ANKT|AW547774|BB165529|BM037|LNP|NuSAP|Q0310|SAPL nucleolar and spindle associated protein 1 protein-coding common_peak1_24_113_0.253125177971643_6.95945260315056_0.763017141132993-3 chr6 108466155 108466698 + 0.763017141132993 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -23317 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_24_113_0.253125177971643_6.95945260315056_0.763017141132993-2 chr5 93134534 93135048 + 0.763017141132993 NA intron (NM_001310669, intron 1 of 10) intron (NM_001310669, intron 1 of 10) 41375 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_406_4030_0.0462429964881839_12.0000435660952_0.762911986611631 chr10 39483522 39492402 + 0.762911986611631 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 118163 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_101_820_-0.106955323463993_9.62776075004581_0.762880217763136 chr1 127343771 127345029 + 0.762880217763136 NA intron (NM_145128, intron 4 of 17) MTEa|LTR|ERVL-MaLR 139414 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_19_125_-0.28614569586914_6.83420707556535_0.762709661588011 chr13 112061696 112062181 + 0.762709661588011 NA Intergenic ORR1F|LTR|ERVL-MaLR 194002 NR_130345 102636620 Mm.402328 NR_130345 ENSMUSG00000086111 Gm15326 OTTMUSG00000020187 predicted gene 15326 ncRNA common_peak1_19_125_-0.28614569586914_6.83420707556535_0.762709661588011-2 chr15 59797103 59797556 + 0.762709661588011 NA Intergenic Intergenic -2370 NR_045076 100503021 Mm.402924 NR_045076 Gm19510 - predicted gene, 19510 ncRNA common_peak1_19_125_-0.28614569586914_6.83420707556535_0.762709661588011-3 chr9 111147017 111147570 + 0.762709661588011 NA intron (NM_001164838, intron 3 of 14) intron (NM_001164838, intron 3 of 14) 29182 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding unique_peak2_45_323_-0.174776887604759_8.25246155908225_0.762647069726644 chr6 103339921 103341620 + 0.762647069726644 NA Intergenic Intergenic -170106 NM_007697 12661 Mm.251288 NM_007697 ENSMUSG00000030077 Chl1 A530023M13Rik|AI465420|CALL|LICAM2 cell adhesion molecule L1-like protein-coding common_peak1_242_2309_-0.0632005371572557_11.1420768677248_0.762455996708392 chr9 102625423 102627402 + 0.762455996708392 NA promoter-TSS (NM_001301689) promoter-TSS (NM_001301689) 116 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak1_37_197_0.197619894503637_7.72816656733143_0.762341098546235 chr5 62756261 62756919 + 0.762341098546235 NA intron (NM_178407, intron 1 of 32) intron (NM_178407, intron 1 of 32) 9587 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding unique_peak2_37_197_0.197619894503637_7.72816656733143_0.762341098546235 chr9 32715252 32717028 + 0.762341098546235 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 20098 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak2_104_849_-0.105738800348245_9.67844963085094_0.762319123445386 chr3 138751970 138754287 + 0.762319123445386 NA intron (NR_121195, intron 1 of 7) intron (NR_121195, intron 1 of 7) 10920 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding common_peak2_113_936_-0.100794206922656_9.82150813419786_0.762288175580848 chr16 32002260 32003873 + 0.762288175580848 NA 5' UTR (NM_177103, exon 1 of 10) 5' UTR (NM_177103, exon 1 of 10) 221 NM_177103 320213 Mm.152890 NM_023801 ENSMUSG00000022772 Senp5 6230429P13Rik|A730063F07Rik|AI851888|BB189556|SMT3IP3 SUMO/sentrin specific peptidase 5 protein-coding common_peak1_61_457_-0.145909272176281_8.7662491520088_0.762187863290817 chr2 180256527 180257279 + 0.762187863290817 NA promoter-TSS (NM_025587) promoter-TSS (NM_025587) -476 NM_025587 66481 Mm.289669 NM_025587 ENSMUSG00000039001 Rps21 1810049N11Rik|2410030A14Rik ribosomal protein S21 protein-coding common_peak2_52_304_0.163076332992864_8.33420359894668_0.76217391268699 chr16 18343158 18344516 + 0.76217391268699 NA promoter-TSS (NM_138583) promoter-TSS (NM_138583) 95 NM_138583 27883 Mm.265990 NM_138583 ENSMUSG00000013539 Tango2 D16H22S680E|T10 transport and golgi organization 2 protein-coding common_peak2_110_907_-0.102630319926218_9.7752333273278_0.762049976720186 chr3 54806847 54808596 + 0.762049976720186 NA promoter-TSS (NM_133231) promoter-TSS (NM_133231) 70 NM_133231 170767 Mm.185735 NM_133231 ENSMUSG00000036615 Rfxap 5730495K23Rik regulatory factor X-associated protein protein-coding common_peak1_39_211_0.189826084253934_7.82283349669017_0.762049154712099 chr14 20782737 20783639 + 0.762049154712099 NA intron (NM_178597, intron 2 of 20) intron (NM_178597, intron 2 of 20) 10900 NM_001039138 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding common_peak1_54_397_-0.155333602157734_8.55895781946478_0.762036277505748 chr2 117438276 117439083 + 0.762036277505748 NA Intergenic Intergenic -95802 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak2_71_544_-0.132202435418909_9.02401120195483_0.761972697675777 chr11 107295584 107297675 + 0.761972697675777 NA intron (NM_145823, intron 4 of 9) RLTR17B_Mm|LTR|ERVK -107248 NM_001161329 68979 Mm.294617 NM_133702 ENSMUSG00000018433 Nol11 1500002M01Rik|AU015220|AU019874 nucleolar protein 11 protein-coding common_peak2_358_3446_0.0499675158802457_11.7761093413074_0.761848718963043 chr1 164447469 164452105 + 0.761848718963043 NA intron (NM_009721, intron 2 of 5) intron (NM_009721, intron 2 of 5) 8568 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding common_peak1_66_500_-0.138123093045484_8.89960524667246_0.76164363928355 chr19 10895173 10896080 + 0.76164363928355 NA intron (NM_134129, intron 1 of 15) CpG 395 NM_001253843 28000 Mm.491104 NM_134129 ENSMUSG00000024735 Prpf19 AA617263|AL024362|D19Wsu55e|NMP200|PSO4|Prp19|Snev pre-mRNA processing factor 19 protein-coding common_peak1_31_213_-0.218601412089622_7.63216628035634_0.761442055513563 chr1 21365793 21366425 + 0.761442055513563 NA Intergenic Intergenic -2222 NM_001033904 433278 Mm.26006 NM_001033904 ENSMUSG00000041722 Khdc1c Khdc1b KH domain containing 1C protein-coding unique_peak2_31_213_-0.218601412089622_7.63216628035634_0.761442055513563 chr11 121204010 121205056 + 0.761442055513563 NA promoter-TSS (NM_001001333) promoter-TSS (NM_001001333) 100 NM_001001333 238023 Mm.275130 NM_001001333 ENSMUSG00000039307 Hexdc BC069960 hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing protein-coding common_peak1_43_307_-0.180376486814595_8.1765982972876_0.760732255721763 chr2 32867585 32868215 + 0.760732255721763 NA Intergenic Intergenic -8234 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_43_307_-0.180376486814595_8.1765982972876_0.760732255721763-2 chr5 3595367 3596176 + 0.760732255721763 NA promoter-TSS (NM_027777) promoter-TSS (NM_027777) -295 NM_027777 71382 Mm.379196 NM_027777 ENSMUSG00000005907 Pex1 5430414H02Rik|E330005K07Rik|ZWS1 peroxisomal biogenesis factor 1 protein-coding common_peak2_82_543_0.122043027918009_9.14848435520934_0.760530085419187 chr12 25298164 25300639 + 0.760530085419187 NA Intergenic Intergenic 170227 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_79_616_-0.124767829145929_9.20674276457645_0.760446339867897 chr9 122865247 122866387 + 0.760446339867897 NA intron (NM_173364, intron 1 of 6) CpG 189 NM_173364 235682 Mm.326477 NM_173364 ENSMUSG00000047036 Zfp445 AW610627|ZNF168|Znf445|mszf29|mszf50 zinc finger protein 445 protein-coding common_peak1_136_1028_0.0893102896408902_10.0516824117144_0.760255543466704 chr13 63564285 63566378 + 0.760255543466704 NA intron (NM_008957, intron 1 of 22) CpG-3956 189 NM_008957 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes patched 1 protein-coding common_peak1_243_2320_-0.0627867339247992_11.1491374403821_0.760220648491263 chr17 66075892 66077944 + 0.760220648491263 NA 5' UTR (NM_001025572, exon 1 of 13) 5' UTR (NM_001025572, exon 1 of 13) 128 NM_001025572 106585 Mm.34706 NM_001025572 ENSMUSG00000034647 Ankrd12 2900001A12Rik|AI447928|ANCO-2|AV347965|GAC-1|mKIAA0874 ankyrin repeat domain 12 protein-coding common_peak2_69_436_0.136568556209291_8.83977374760524_0.760155405505602 chr1 162206676 162208183 + 0.760155405505602 NA intron (NM_172646, intron 14 of 19) intron (NM_172646, intron 14 of 19) -10194 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak1_139_1194_-0.0881245659718655_10.1787326198822_0.760125449248166-2 chr17 26676126 26677435 + 0.760125449248166 NA intron (NM_025272, intron 1 of 3) intron (NM_025272, intron 1 of 3) 384 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding common_peak1_139_1194_-0.0881245659718655_10.1787326198822_0.760125449248166 chr11 70699765 70701412 + 0.760125449248166 NA promoter-TSS (NM_001252484) promoter-TSS (NM_001252484) 40 NM_153103 16562 Mm.99996 NM_153103 ENSMUSG00000020821 Kif1c B430105J22Rik|D11Bwg1349e|Ltxs1|Orch3 kinesin family member 1C protein-coding common_peak1_90_717_-0.115494991103004_9.43009253827155_0.759988724429256 chr3 68782940 68784235 + 0.759988724429256 NA Intergenic Intergenic -85999 NM_001167996 68725 Mm.45741 NM_001167996 ENSMUSG00000046999 1110032F04Rik AI115547 RIKEN cDNA 1110032F04 gene protein-coding common_peak1_126_1064_-0.0944270209391558_10.0094242046436_0.759834534256355 chr9 103304594 103305781 + 0.759834534256355 NA promoter-TSS (NM_176979) promoter-TSS (NM_176979) -140 NM_176979 235559 Mm.259893 NM_176979 ENSMUSG00000032555 Topbp1 1110031N14Rik|2810429C13Rik|AI256758|D430026L04Rik|mKIAA0259 topoisomerase (DNA) II binding protein 1 protein-coding common_peak1_354_3643_-0.0500421110767135_11.8062861882637_0.759690064876495 chr11 23769268 23772313 + 0.759690064876495 NA 5' UTR (NM_009044, exon 1 of 10) 5' UTR (NM_009044, exon 1 of 10) 180 NM_009044 19696 Mm.4869 NM_009044 ENSMUSG00000020275 Rel c-Rel reticuloendotheliosis oncogene protein-coding common_peak2_64_397_0.140289899789247_8.70676957043827_0.75941400298277 chr14 56303404 56304473 + 0.75941400298277 NA Intergenic Intergenic -41678 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak1_114_823_0.100065863788611_9.73653345907752_0.759348462560871 chr7 132791761 132793991 + 0.759348462560871 NA intron (NM_212473, intron 1 of 4) intron (NM_212473, intron 1 of 4) -5941 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak2_52_380_-0.157905422050209_8.49469447646822_0.759340957515782 chr1 166047575 166049149 + 0.759340957515782 NA Intergenic Intergenic -45728 NM_011137 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding common_peak1_52_380_-0.157905422050209_8.49469447646822_0.759340957515782-2 chr14 103349338 103350426 + 0.759340957515782 NA Intergenic Intergenic -3082 NM_207215 105689 Mm.6478 NM_207215 ENSMUSG00000033004 Mycbp2 AU023734|AW107953|AW546647|C130061D10Rik|Pam|Phr1|R75243 MYC binding protein 2 protein-coding common_peak1_52_380_-0.157905422050209_8.49469447646822_0.759340957515782 chr13 91460081 91460919 + 0.759340957515782 NA promoter-TSS (NM_024272) promoter-TSS (NM_024272) -597 NM_024272 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding common_peak1_12_46_0.374220081776939_5.74169889256611_0.759155512401768-2 chr5 118476120 118476466 + 0.759155512401768 NA Intergenic Intergenic -84426 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_12_46_0.374220081776939_5.74169889256611_0.759155512401768-3 chr8 117305486 117305826 + 0.759155512401768 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -43514 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_12_46_0.374220081776939_5.74169889256611_0.759155512401768 chr2 59054387 59054666 + 0.759155512401768 NA Intergenic Intergenic -35920 NM_001001178 227933 Mm.330234 NM_177650 ENSMUSG00000036641 Ccdc148 5830402J09 coiled-coil domain containing 148 protein-coding common_peak2_16_105_-0.324384193589027_6.56572835776869_0.759030078841297 chr5 108001002 108001622 + 0.759030078841297 NA Intergenic RLTR42|LTR|ERVK -14235 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_16_105_-0.324384193589027_6.56572835776869_0.759030078841297 chr2 157446839 157447229 + 0.759030078841297 NA intron (NM_001025395, intron 2 of 13) ID_B1|SINE|B4 22741 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak1_16_105_-0.324384193589027_6.56572835776869_0.759030078841297-2 chr7 99428395 99428831 + 0.759030078841297 NA intron (NM_201352, intron 4 of 17) intron (NM_201352, intron 4 of 17) -37391 NM_028145 72184 Mm.153585 NM_028145 ENSMUSG00000035298 Klhl35 2810406K13Rik kelch-like 35 protein-coding unique_peak2_16_105_-0.324384193589027_6.56572835776869_0.759030078841297 chr7 125600726 125601801 + 0.759030078841297 NA Intergenic Intergenic -2166 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak2_16_105_-0.324384193589027_6.56572835776869_0.759030078841297-2 chr9 13446696 13447281 + 0.759030078841297 NA Intergenic Intergenic 15627 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA common_peak2_93_745_-0.113288421642862_9.48638760943381_0.758891544194926 chr4 120924283 120925887 + 0.758891544194926 NA promoter-TSS (NM_028457) promoter-TSS (NM_028457) -80 NM_001160043 73172 Mm.151436 NM_028457 ENSMUSG00000028629 Exo5 3110037I16Rik|AV297100|Dem1|Exo V|mExo5 exonuclease 5 protein-coding common_peak1_102_716_0.105718575074835_9.53868859623932_0.758781735009227 chr2 178519599 178520959 + 0.758781735009227 NA Intergenic MLTR73|LTR|ERV1 89764 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak2_120_1004_-0.0964129414308434_9.92477331535087_0.758641022938999 chr9 65200761 65202682 + 0.758641022938999 NA Intergenic Intergenic -12969 NM_177460 214424 Mm.31129 NM_177460 ENSMUSG00000032392 Parp16 ARTD15|BC055447|C79952|PARP-16 poly (ADP-ribose) polymerase family, member 16 protein-coding unique_peak2_24_161_-0.25383481074824_7.2129325975105_0.758530840131723 chr5 143519997 143521265 + 0.758530840131723 NA intron (NM_009007, intron 1 of 5) intron (NM_009007, intron 1 of 5) 7362 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e RAS-related C3 botulinum substrate 1 protein-coding common_peak1_24_161_-0.25383481074824_7.2129325975105_0.758530840131723 chr11 75193743 75194340 + 0.758530840131723 NA promoter-TSS (NM_177708) promoter-TSS (NM_177708) 48 NM_177708 237847 Mm.82661 NM_177708 ENSMUSG00000045287 Rtn4rl1 Ngr3|Ngrh2|Ngrl2 reticulon 4 receptor-like 1 protein-coding common_peak2_59_440_-0.149366101773461_8.70995179467079_0.758319089158707 chr14 69336662 69338015 + 0.758319089158707 NA promoter-TSS (NR_045091) promoter-TSS (NR_045091) 187 NM_026174 67464 Mm.489765 NM_026174 ENSMUSG00000095463 Entpd4 1200014F22Rik|4930513O14Rik|A430102M06Rik|AI414893|Lysal1|mKIAA0392 ectonucleoside triphosphate diphosphohydrolase 4 protein-coding common_peak1_59_440_-0.149366101773461_8.70995179467079_0.758319089158707 chr4 62360666 62361399 + 0.758319089158707 NA promoter-TSS (NM_001045528) promoter-TSS (NM_001045528) 331 NM_175090 20529 Mm.248637 NM_175090 ENSMUSG00000066150 Slc31a1 4930445G01Rik|AI787263|AU016967|Ctr1 solute carrier family 31, member 1 protein-coding common_peak1_26_125_0.244927643339678_7.09974374516976_0.758100214244447 chr17 33470860 33471389 + 0.758100214244447 NA Intergenic Intergenic 38225 NM_183282 69481 Mm.154333 NM_183282 ENSMUSG00000092519 Actl9 1700029I08Rik|AV259599 actin-like 9 protein-coding common_peak1_26_125_0.244927643339678_7.09974374516976_0.758100214244447-3 chr7 68716464 68717024 + 0.758100214244447 NA Intergenic Intergenic 32494 NM_001042592 66412 Mm.251199 NM_025549 ENSMUSG00000042659 Arrdc4 2410003C09Rik|AV216361 arrestin domain containing 4 protein-coding common_peak1_26_125_0.244927643339678_7.09974374516976_0.758100214244447-2 chr3 87910557 87911117 + 0.758100214244447 NA intron (NM_008231, intron 1 of 5) intron (NM_008231, intron 1 of 5) 4516 NM_008231 15191 Mm.292208 NM_008231 ENSMUSG00000004897 Hdgf AI118077|D3Ertd299e hepatoma-derived growth factor protein-coding unique_peak2_57_342_0.153210859526112_8.49867019593587_0.758071920385509 chr16 92788916 92791413 + 0.758071920385509 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 35910 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_117_975_-0.0985986213347054_9.88143802689553_0.757849063959756 chr18 82474792 82476263 + 0.757849063959756 NA intron (NM_010777, intron 1 of 6) intron (NM_010777, intron 1 of 6) 404 NM_001025245 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak2_140_1066_0.0879211427548778_10.1033050322019_0.757506715209915 chr11 53429717 53431783 + 0.757506715209915 NA promoter-TSS (NM_025352) promoter-TSS (NM_025352) 81 NM_025352 22272 Mm.251621 NM_025352 ENSMUSG00000044894 Uqcrq 1100001F06Rik|1500040F11Rik|5830407L17Rik|9.5kDa|AA959903|QP-C|Qpc|Uqcrb|c1502 ubiquinol-cytochrome c reductase, complex III subunit VII protein-coding common_peak1_111_916_-0.100988551204416_9.79028364799285_0.757362421290379 chr11 90263459 90265100 + 0.757362421290379 NA intron (NM_026178, intron 3 of 6) intron (NM_026178, intron 3 of 6) 14803 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak1_366_3543_0.0489318443918041_11.8156288107509_0.756763110030384 chr10 118867177 118869839 + 0.756763110030384 NA intron (NM_001014390, intron 1 of 2) CpG-1533 395 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_147_1133_0.0858033486418961_10.1901065992632_0.756586835100486 chr15 79347271 79348738 + 0.756586835100486 NA promoter-TSS (NM_001304832) promoter-TSS (NM_001304832) -57 NM_001304831 17133 Mm.86646 NM_010755 ENSMUSG00000042622 Maff - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) protein-coding unique_peak2_7_47_-0.515321548782344_5.32730172632998_0.756055617691202-2 chr9 108123240 108123700 + 0.756055617691202 NA intron (NM_007567, intron 3 of 11) intron (NM_007567, intron 3 of 11) -10248 NR_126078 76873 Mm.436935 NR_126077 ENSMUSG00000102224 4930447F24Rik - RIKEN cDNA 4930447F24 gene ncRNA unique_peak2_7_47_-0.515321548782344_5.32730172632998_0.756055617691202 chr12 25356833 25357340 + 0.756055617691202 NA Intergenic Intergenic 227912 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_48_275_0.168351780132516_8.19270034684443_0.756011692964183 chr10 19043170 19044318 + 0.756011692964183 NA Intergenic RLTR16|LTR|ERVK -28334 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak2_319_3214_-0.0530195498391102_11.6240932472958_0.755953345756296 chr13 108296377 108300087 + 0.755953345756296 NA Intergenic Intergenic -18105 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak2_57_422_-0.149238227421025_8.64989473940944_0.755803693297492 chr8 119344405 119345265 + 0.755803693297492 NA intron (NM_024219, intron 1 of 3) intron (NM_024219, intron 1 of 3) 297 NM_024219 68196 Mm.358714 NM_024219 ENSMUSG00000031839 Hsbp1 0610007A03Rik|AA408769|Hsp25 heat shock factor binding protein 1 protein-coding common_peak1_57_422_-0.149238227421025_8.64989473940944_0.755803693297492 chr13 32982966 32983932 + 0.755803693297492 NA Intergenic RLTR12BD_Mm|LTR|ERVK 17936 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak2_50_364_-0.164081876639923_8.42971171544742_0.755695665509422 chr13 24620319 24621753 + 0.755695665509422 NA intron (NM_178658, intron 1 of 13) G-rich|Low_complexity|Low_complexity 6430 NM_178658 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak2_21_95_0.274835241972795_6.72238012170755_0.755630265713907 chr11 116139095 116139783 + 0.755630265713907 NA promoter-TSS (NM_024177) promoter-TSS (NM_024177) -571 NM_024177 60441 Mm.29974 NM_024177 ENSMUSG00000020775 Mrpl38 1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3 mitochondrial ribosomal protein L38 protein-coding common_peak2_21_95_0.274835241972795_6.72238012170755_0.755630265713907-2 chr3 115691881 115692478 + 0.755630265713907 NA Intergenic Intergenic 22876 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding common_peak1_21_95_0.274835241972795_6.72238012170755_0.755630265713907 chr11 72963830 72964300 + 0.755630265713907 NA intron (NM_016745, intron 1 of 21) intron (NM_016745, intron 1 of 21) 2896 NM_001163337 53313 Mm.6306 NM_016745 ENSMUSG00000020788 Atp2a3 SERCA3b|Serca3 ATPase, Ca++ transporting, ubiquitous protein-coding common_peak1_21_95_0.274835241972795_6.72238012170755_0.755630265713907-3 chr4 8810446 8810925 + 0.755630265713907 NA intron (NM_001277149, intron 6 of 37) intron (NM_001277149, intron 6 of 37) 120279 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_21_95_0.274835241972795_6.72238012170755_0.755630265713907-2 chr11 105126460 105127035 + 0.755630265713907 NA intron (NM_172567, intron 1 of 8) CpG 322 NM_172567 52686 Mm.270091 NM_172567 ENSMUSG00000020691 Mettl2 2810438F06Rik|AW493404|C130031G21Rik|D11Ertd768e|METL|PSENIP1 methyltransferase like 2 protein-coding unique_peak2_21_95_0.274835241972795_6.72238012170755_0.755630265713907 chr14 121938007 121938735 + 0.755630265713907 NA intron (NM_026861, intron 4 of 8) intron (NM_026861, intron 4 of 8) -22597 NM_182806 110168 Mm.37405 NM_182806 ENSMUSG00000050350 Gpr18 - G protein-coupled receptor 18 protein-coding common_peak1_21_95_0.274835241972795_6.72238012170755_0.755630265713907-5 chr6 113653419 113653904 + 0.755630265713907 NA intron (NM_001113553, intron 2 of 11) MTEa|LTR|ERVL-MaLR 15194 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding common_peak1_21_95_0.274835241972795_6.72238012170755_0.755630265713907-4 chr6 38549567 38550112 + 0.755630265713907 NA Intergenic Intergenic -1495 NM_001311100 192196 Mm.276133 NM_138680 ENSMUSG00000029823 Luc7l2 4930471C18Rik|AA522013|AU015269|CGI59|Cgi74 LUC7-like 2 (S. cerevisiae) protein-coding common_peak2_80_527_0.121947963634424_9.10536810117567_0.755172974546728 chr13 44982629 44985841 + 0.755172974546728 NA intron (NM_025772, intron 4 of 9) intron (NM_025772, intron 4 of 9) 17861 NM_025772 94245 Mm.352311 NM_025772 ENSMUSG00000057531 Dtnbp1 5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy dystrobrevin binding protein 1 protein-coding common_peak1_179_1611_-0.0752327685906238_10.6170196442327_0.754662914811747 chr11 96976536 96977786 + 0.754662914811747 NA intron (NM_030220, intron 1 of 6) intron (NM_030220, intron 1 of 6) 527 NM_030220 78912 Mm.491183 NM_030220 ENSMUSG00000018678 Sp2 4930480I16Rik|mKIAA0048 Sp2 transcription factor protein-coding common_peak1_26_175_-0.237224051797702_7.34081959273845_0.754577797381949 chr8 70340901 70341399 + 0.754577797381949 NA intron (NM_001122829, intron 5 of 23) intron (NM_001122829, intron 5 of 23) 11385 NM_008107 14559 Mm.258280 NM_008107 ENSMUSG00000087408 Gdf1 AI385651|Gdf-1 growth differentiation factor 1 protein-coding unique_peak2_26_175_-0.237224051797702_7.34081959273845_0.754577797381949-2 chr7 28716090 28717270 + 0.754577797381949 NA promoter-TSS (NM_001310687) promoter-TSS (NM_001310687) -102 NM_001310687 50760 Mm.358659 NM_015796 ENSMUSG00000030598 Fbxo17 Fbg4|Fbx17|Fbxo26 F-box protein 17 protein-coding unique_peak2_26_175_-0.237224051797702_7.34081959273845_0.754577797381949 chr1 120842754 120843723 + 0.754577797381949 NA Intergenic Intergenic 240751 NM_010133 13798 Mm.2657 NM_010133 ENSMUSG00000058665 En1 En-1|Mo-en.1|engrailed-1 engrailed 1 protein-coding common_peak2_325_3056_0.0525559182207562_11.6041787959973_0.754323162159867 chr7 139969605 139975813 + 0.754323162159867 NA intron (NM_001033465, intron 6 of 6) intron (NM_001033465, intron 6 of 6) 6046 NM_001033465 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding common_peak1_91_726_-0.114126127453371_9.44874849019291_0.754076423639675 chr2 32082225 32083883 + 0.754076423639675 NA 5' UTR (NM_175511, exon 1 of 2) 5' UTR (NM_175511, exon 1 of 2) 651 NM_175511 241303 Mm.250441 NM_175511 ENSMUSG00000050592 Fam78a A130092J06Rik family with sequence similarity 78, member A protein-coding common_peak2_115_833_0.0979843634406183_9.75289575516497_0.754035550538107 chr11 68462532 68466689 + 0.754035550538107 NA intron (NM_177320, intron 1 of 18) intron (NM_177320, intron 1 of 18) 32485 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak2_121_1014_-0.0961322498392096_9.93919788715293_0.753979373780221 chr11 90262945 90265360 + 0.753979373780221 NA intron (NM_026178, intron 3 of 6) intron (NM_026178, intron 3 of 6) 14676 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak1_48_347_-0.166067258938044_8.35990986637971_0.75374218718155 chr7 4318021 4318779 + 0.75374218718155 NA Intergenic Lx5|LINE|L1 -19324 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak1_109_778_0.102423811510603_9.65669142381697_0.753719351237834 chr2 129128978 129130230 + 0.753719351237834 NA promoter-TSS (NM_025395) promoter-TSS (NM_025395) -96 NM_025395 66170 Mm.40621 NM_025395 ENSMUSG00000037938 Chchd5 1110027L01Rik|AW045710 coiled-coil-helix-coiled-coil-helix domain containing 5 protein-coding unique_peak2_12_78_-0.374971814722526_6.11629484081584_0.753641103152394-3 chrX 73947841 73948560 + 0.753641103152394 NA exon (NM_008224, exon 19 of 26) exon (NM_008224, exon 19 of 26) -17350 NM_001164704 19703 Mm.236969 NM_023132 ENSMUSG00000031387 Renbp Age|Rnbp renin binding protein protein-coding unique_peak2_12_78_-0.374971814722526_6.11629484081584_0.753641103152394-2 chr9 120960467 120961221 + 0.753641103152394 NA TTS (NM_007614) TTS (NM_007614) 5758 NR_106058 102465661 NR_106058 ENSMUSG00000106193 Mir7090 mmu-mir-7090 microRNA 7090 ncRNA unique_peak2_12_78_-0.374971814722526_6.11629484081584_0.753641103152394 chr11 22512234 22513036 + 0.753641103152394 NA intron (NM_153596, intron 1 of 3) CpG 352 NM_153596 103765 Mm.221274 NM_153596 ENSMUSG00000049904 Tmem17 AI503894|AW049890 transmembrane protein 17 protein-coding common_peak1_12_78_-0.374971814722526_6.11629484081584_0.753641103152394 chr4 141425356 141425744 + 0.753641103152394 NA TTS (NM_013868) TTS (NM_013868) 4771 NM_013868 29818 Mm.46181 NM_013868 ENSMUSG00000006221 Hspb7 27kDa|Hsp25-2|cvHsp heat shock protein family, member 7 (cardiovascular) protein-coding common_peak1_214_1815_0.0672842698413572_10.8601906222116_0.753355244363304 chr3 103278742 103280732 + 0.753355244363304 NA 5' UTR (NM_001079830, exon 1 of 19) 5' UTR (NM_001079830, exon 1 of 19) 444 NM_001079830 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding common_peak2_83_552_0.119563595936503_9.17091746820296_0.753352265610528 chr16 55965721 55967476 + 0.753352265610528 NA exon (NM_024218, exon 2 of 6) exon (NM_024218, exon 2 of 6) 323 NM_024218 68193 Mm.29221 NM_024218 ENSMUSG00000098274 Rpl24 0610008L05Rik|Bst ribosomal protein L24 protein-coding common_peak2_103_725_0.104820129017893_9.5562358025047_0.753308059551009 chr5 122314218 122316229 + 0.753308059551009 NA intron (NM_177242, intron 3 of 5) intron (NM_177242, intron 3 of 5) 30825 NM_177242 320717 Mm.489670 NM_177242 ENSMUSG00000038582 Pptc7 9130017A15Rik|AA672638|AI848390|TA-PP2C PTC7 protein phosphatase homolog protein-coding common_peak1_67_509_-0.137592553511976_8.92555716010287_0.753116382486005 chr5 66074428 66075612 + 0.753116382486005 NA intron (NM_001291226, intron 2 of 5) ORR1D1|LTR|ERVL-MaLR 23159 NM_139065 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding common_peak1_158_1389_-0.0809928860144726_10.4003727246036_0.752975985320828 chr5 142366780 142368474 + 0.752975985320828 NA Intergenic CpG -33870 NM_199068 17425 Mm.24214 NM_010812 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf forkhead box K1 protein-coding common_peak2_46_261_0.169708085888567_8.11827704448173_0.75279059406313 chr16 64941174 64942616 + 0.75279059406313 NA intron (NM_008310, intron 2 of 2) RLTR14|LTR|ERV1 89810 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak2_97_782_-0.109379949194_9.55817852269404_0.752707945113733 chr11 106415014 106416537 + 0.752707945113733 NA intron (NM_023913, intron 10 of 21) intron (NM_023913, intron 10 of 21) -33134 NM_010494 15896 Mm.394 NM_010494 ENSMUSG00000001029 Icam2 CD102|Icam-2|Ly-60 intercellular adhesion molecule 2 protein-coding common_peak1_100_810_-0.106709910611816_9.61020314891137_0.752512945310761 chr12 111966179 111967254 + 0.752512945310761 NA intron (NM_027360, intron 1 of 3) CpG 261 NM_027360 70257 Mm.318 NM_027360 ENSMUSG00000021290 2010107E04Rik 9430003J03Rik|AU043134|AV124504|Mp68 RIKEN cDNA 2010107E04 gene protein-coding common_peak1_335_3408_-0.0512089955960242_11.7095283863419_0.75246543966123 chr19 53528323 53531425 + 0.75246543966123 NA intron (NM_001085390, intron 1 of 3) CpG 556 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak1_55_405_-0.152158855980895_8.58925648919473_0.752448202672574 chr17 47564158 47565383 + 0.752448202672574 NA intron (NM_001081635, intron 1 of 6) Arthur1|DNA|hAT-Tip100 -28697 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak2_28_138_0.229722241789061_7.23380219361804_0.752436957991269 chr10 40527203 40528417 + 0.752436957991269 NA Intergenic Intergenic -42552 NM_027572 70840 Mm.332570 NM_027572 ENSMUSG00000019834 Slc22a16 4921504E14Rik|CT2|FLIPT2|OCT6|OKB1 solute carrier family 22 (organic cation transporter), member 16 protein-coding common_peak2_141_1214_-0.0869687414597706_10.2032562277633_0.752335261694261 chr9 79969814 79972406 + 0.752335261694261 NA intron (NM_001081243, intron 1 of 5) intron (NM_001081243, intron 1 of 5) 6772 NM_001081243 70598 Mm.23049 NM_001081243 ENSMUSG00000034898 Filip1 5730485H21Rik|AI843021 filamin A interacting protein 1 protein-coding common_peak1_21_139_-0.269485274251015_6.99454037981946_0.752116864962435-2 chr11 54958685 54959105 + 0.752116864962435 NA intron (NM_001199275, intron 1 of 18) B4A|SINE|B4 4045 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding unique_peak2_21_139_-0.269485274251015_6.99454037981946_0.752116864962435 chr17 28818789 28820041 + 0.752116864962435 NA intron (NM_001081315, intron 7 of 12) intron (NM_001081315, intron 7 of 12) 18289 NM_001081315 268936 Mm.291877 NM_199061 ENSMUSG00000063952 Brpf3 AI413466|AW493400|mKIAA1286 bromodomain and PHD finger containing, 3 protein-coding common_peak1_21_139_-0.269485274251015_6.99454037981946_0.752116864962435-5 chr2 154790377 154790878 + 0.752116864962435 NA promoter-TSS (NM_023130) promoter-TSS (NM_023130) -483 NM_001139512 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding common_peak1_21_139_-0.269485274251015_6.99454037981946_0.752116864962435-3 chr11 115231772 115232225 + 0.752116864962435 NA intron (NM_001033393, intron 9 of 9) intron (NM_001033393, intron 9 of 9) 35245 NM_010350 14813 Mm.39090 NM_010350 ENSMUSG00000020734 Grin2c GluN2C|NMDAR2C|NR2C glutamate receptor, ionotropic, NMDA2C (epsilon 3) protein-coding common_peak1_21_139_-0.269485274251015_6.99454037981946_0.752116864962435 chr11 19988176 19988574 + 0.752116864962435 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 63933 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_21_139_-0.269485274251015_6.99454037981946_0.752116864962435-4 chr18 70567688 70568159 + 0.752116864962435 NA promoter-TSS (NM_001311071) promoter-TSS (NM_001311071) -369 NM_001311071 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak1_155_1212_0.081804236860064_10.2852659535505_0.752090678279779 chr2 26388348 26389997 + 0.752090678279779 NA promoter-TSS (NM_173180) promoter-TSS (NM_173180) 144 NM_001085407 68112 Mm.253771 NM_026563 ENSMUSG00000026927 Sdccag3 C330016H24Rik|C630038K21Rik serologically defined colon cancer antigen 3 protein-coding common_peak2_44_246_0.177811405979954_8.03727293457466_0.751752491891544 chr12 91383885 91384974 + 0.751752491891544 NA promoter-TSS (NM_181815) promoter-TSS (NM_181815) -20 NM_181815 75216 Mm.312204 NM_181815 ENSMUSG00000061533 Cep128 4930534B04Rik|5430424K18Rik|AI449708|AI480494|E230024F20 centrosomal protein 128 protein-coding common_peak1_195_1784_-0.0716074996330658_10.7659046090999_0.751516525327892 chr10 118465992 118468102 + 0.751516525327892 NA Intergenic Intergenic 26001 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak1_60_366_0.144883198203759_8.59207785194509_0.751277675764212 chr1 51593932 51594765 + 0.751277675764212 NA Intergenic Intergenic -115949 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak2_60_366_0.144883198203759_8.59207785194509_0.751277675764212 chr13 17943426 17944864 + 0.751277675764212 NA promoter-TSS (NM_019491) promoter-TSS (NM_019491) 72 NM_019491 56044 Mm.27348 NM_019491 ENSMUSG00000008859 Rala 3010001O15Rik|AW322615|Ral|Rasl1 v-ral simian leukemia viral oncogene A (ras related) protein-coding common_peak1_53_312_0.158801031093333_8.36941936247928_0.750999752055463 chr19 5510550 5511377 + 0.750999752055463 NA promoter-TSS (NM_001024560) promoter-TSS (NM_001024560) -474 NM_001024560 225861 Mm.20071 NM_001024560 ENSMUSG00000056185 Snx32 B930037P14Rik|Snx6b sorting nexin 32 protein-coding common_peak2_46_331_-0.171908343920908_8.28908525938647_0.750835344908237-2 chr19 57075586 57077516 + 0.750835344908237 NA intron (NM_001103178, intron 4 of 19) intron (NM_001103178, intron 4 of 19) 42473 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_46_331_-0.171908343920908_8.28908525938647_0.750835344908237 chr1 86703294 86704529 + 0.750835344908237 NA intron (NM_153530, intron 1 of 20) CpG 107 NM_001172157 208718 Mm.389152 NM_153530 ENSMUSG00000053333 Dis3l2 4930429A22Rik|8030493P09Rik DIS3 like 3'-5' exoribonuclease 2 protein-coding common_peak1_86_679_-0.11659310547185_9.35109438340178_0.750740087737357 chr9 15357079 15358391 + 0.750740087737357 NA promoter-TSS (NM_176976) promoter-TSS (NM_176976) 53 NM_176976 319675 Mm.218317 NM_176976 ENSMUSG00000046111 Cep295 5830418K08Rik|5832426L23Rik|Gm1131|Kiaa1731 centrosomal protein 295 protein-coding common_peak2_135_1019_0.0890197576743823_10.038863315696_0.75067285196292 chr6 73247960 73249442 + 0.75067285196292 NA exon (NM_019879, exon 1 of 9) exon (NM_019879, exon 1 of 9) 196 NM_019879 56451 Mm.29845 NM_019879 ENSMUSG00000052738 Suclg1 1500000I01Rik|Sucla1 succinate-CoA ligase, GDP-forming, alpha subunit protein-coding common_peak2_89_603_0.114386209425909_9.29559784403803_0.750477118622009 chr10 78456928 78459000 + 0.750477118622009 NA intron (NM_172134, intron 1 of 10) intron (NM_172134, intron 1 of 10) 6984 NM_172134 216134 Mm.206159 NM_172134 ENSMUSG00000032788 Pdxk 2310036D04Rik|AA119688|C77999 pyridoxal (pyridoxine, vitamin B6) kinase protein-coding common_peak2_291_2664_0.0556238311118022_11.4077317332024_0.75005854874361 chr7 44847930 44851168 + 0.75005854874361 NA promoter-TSS (NM_001253920) promoter-TSS (NM_001253920) -86 NM_001290694 67605 Mm.148007 NM_026270 ENSMUSG00000011096 Akt1s1 1110012J22Rik|AI227026|Lobe|Lobel|PRAS40 AKT1 substrate 1 (proline-rich) protein-coding common_peak1_227_2138_-0.0649974252421579_11.030222054544_0.750052525452717 chr4 59330247 59331904 + 0.750052525452717 NA intron (NM_001163288, intron 13 of 16) intron (NM_001163288, intron 13 of 16) 71024 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA unique_peak2_28_190_-0.228765513523181_7.46304607127416_0.749911162030604-2 chr5 139160621 139162160 + 0.749911162030604 NA intron (NM_001081265, intron 4 of 12) intron (NM_001081265, intron 4 of 12) 11167 NM_001081265 433956 Mm.5547 NM_001081265 ENSMUSG00000025857 Dnaaf5 BC053401|C76907|Heatr2 dynein, axonemal assembly factor 5 protein-coding common_peak1_28_190_-0.228765513523181_7.46304607127416_0.749911162030604 chr10 76531311 76532057 + 0.749911162030604 NA promoter-TSS (NM_146006) promoter-TSS (NM_146006) 79 NM_146006 16987 Mm.55075 NM_146006 ENSMUSG00000033105 Lss 2810025N20Rik|D10Ertd116e|Osc lanosterol synthase protein-coding unique_peak2_28_190_-0.228765513523181_7.46304607127416_0.749911162030604 chr13 52914040 52915250 + 0.749911162030604 NA intron (NM_016709, intron 3 of 9) intron (NM_016709, intron 3 of 9) 15032 NM_016709 11992 Mm.252034 NM_016709 ENSMUSG00000021460 Auh C77140|W91705 AU RNA binding protein/enoyl-coenzyme A hydratase protein-coding common_peak1_44_314_-0.173029380822648_8.21269332797596_0.749866467720282 chr9 56552040 56553146 + 0.749866467720282 NA Intergenic L2b|LINE|L2 83055 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding common_peak1_18_78_0.296583455219787_6.452072475787_0.749857950442339-2 chr3 96629414 96629853 + 0.749857950442339 NA promoter-TSS (NM_025875) promoter-TSS (NM_025875) 186 NR_003619 229613 Mm.445135 NM_175469 ENSMUSG00000045327 6330549D23Rik - RIKEN cDNA 6330549D23 gene pseudo unique_peak2_18_78_0.296583455219787_6.452072475787_0.749857950442339 chr2 124751309 124751912 + 0.749857950442339 NA Intergenic MTEb|LTR|ERVL-MaLR 98029 NM_199239 214968 Mm.330536 NM_172537 ENSMUSG00000027200 Sema6d 1110067B02Rik|AA409156|D330011G23|mKIAA1479 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D protein-coding common_peak1_18_78_0.296583455219787_6.452072475787_0.749857950442339-3 chr4 62678691 62679094 + 0.749857950442339 NA intron (NM_001310706, intron 1 of 6) intron (NM_001310706, intron 1 of 6) 4918 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_18_78_0.296583455219787_6.452072475787_0.749857950442339-4 chr9 41143264 41143702 + 0.749857950442339 NA intron (NM_176860, intron 1 of 13) MLT1D|LTR|ERVL-MaLR 14011 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak1_18_78_0.296583455219787_6.452072475787_0.749857950442339 chr12 21172258 21172657 + 0.749857950442339 NA intron (NM_001135192, intron 2 of 28) intron (NM_001135192, intron 2 of 28) 60701 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_60_448_-0.146052183694174_8.73754554289406_0.749744627802797 chr1 21373087 21374316 + 0.749744627802797 NA Intergenic Intergenic 5370 NM_001033904 433278 Mm.26006 NM_001033904 ENSMUSG00000041722 Khdc1c Khdc1b KH domain containing 1C protein-coding common_peak1_53_388_-0.154806466960242_8.52622311150607_0.749381787203408 chr18 36793909 36794602 + 0.749381787203408 NA intron (NM_025594, intron 1 of 5) intron (NM_025594, intron 1 of 5) 332 NM_025594 66492 Mm.251155 NM_025594 ENSMUSG00000001383 Zmat2 2610510D14Rik|2900082I05Rik zinc finger, matrin type 2 protein-coding common_peak1_65_491_-0.138582246492003_8.87322338209324_0.749379001269294 chr17 84855105 84856279 + 0.749379001269294 NA Intergenic Intergenic -64906 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak1_65_491_-0.138582246492003_8.87322338209324_0.749379001269294-2 chr19 4169643 4170377 + 0.749379001269294 NA exon (NM_134148, exon 8 of 10) exon (NM_134148, exon 8 of 10) 5469 NM_134148 107239 Mm.482310 NM_134148 ENSMUSG00000075289 Carns1 AI790298|Atpgd1|mKIAA1394 carnosine synthase 1 protein-coding common_peak2_92_629_0.111608702500311_9.35501236963744_0.749366204109171 chr10 123075546 123077085 + 0.749366204109171 NA 5' UTR (NM_001163024, exon 1 of 35) 5' UTR (NM_001163024, exon 1 of 35) 190 NM_001163024 67074 Mm.169924 NM_153395 ENSMUSG00000034602 Mon2 2610528O22Rik|AW495628|Sf21|mKIAA1040 MON2 homolog, regulator of endosome to Golgi trafficking protein-coding common_peak1_170_1361_0.0771222476913866_10.4500721118578_0.749349058151399 chr7 126791406 126792604 + 0.749349058151399 NA intron (NM_019674, intron 2 of 8) CpG 466 NM_019674 56420 Mm.41998 NM_019674 ENSMUSG00000030697 Ppp4c 1110002D08Rik|AU016079|Ppx protein phosphatase 4, catalytic subunit protein-coding common_peak1_192_1751_-0.0719817671549148_10.7387961760237_0.749346321582581 chr5 123394072 123395716 + 0.749346321582581 NA promoter-TSS (NM_133917) promoter-TSS (NM_133917) 96 NM_133917 208104 Mm.83277 NM_133917 ENSMUSG00000038342 Mlxip AW228700|Mir|bHLHe36 MLX interacting protein protein-coding common_peak1_328_3092_0.0518760786022217_11.6207291573904_0.749140454344246 chr6 52713194 52715019 + 0.749140454344246 NA intron (NM_025816, intron 1 of 17) CpG 377 NM_025816 52440 Mm.389757 NM_025816 ENSMUSG00000004535 Tax1bp1 1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151 Tax1 (human T cell leukemia virus type I) binding protein 1 protein-coding common_peak2_30_151_0.218754691290721_7.35730485908895_0.749035023327394 chr15 64066797 64067760 + 0.749035023327394 NA Intergenic MER5A|DNA|hAT-Charlie -6830 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_30_151_0.218754691290721_7.35730485908895_0.749035023327394 chr2 167940154 167940751 + 0.749035023327394 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 8125 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_30_151_0.218754691290721_7.35730485908895_0.749035023327394-2 chr2 167313747 167314631 + 0.749035023327394 NA intron (NM_019835, intron 1 of 8) intron (NM_019835, intron 1 of 8) 34989 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding unique_peak2_30_151_0.218754691290721_7.35730485908895_0.749035023327394 chr9 111215759 111217125 + 0.749035023327394 NA intron (NM_001164838, intron 11 of 14) intron (NM_001164838, intron 11 of 14) 55166 NM_026810 17350 Mm.486383 NM_026810 ENSMUSG00000032498 Mlh1 1110035C23Rik|AI317206|AI325952|AI561766 mutL homolog 1 protein-coding common_peak2_163_1291_0.0792775327442143_10.375029121066_0.748790605920913 chr3 116661467 116663211 + 0.748790605920913 NA intron (NM_008246, intron 1 of 11) CpG 338 NM_008246 15247 Mm.280077 NM_008246 ENSMUSG00000089911 Mfsd14a Hiat1 major facilitator superfamily domain containing 14A protein-coding common_peak2_113_815_0.0986856887650358_9.72176818635401_0.748657792243868 chr11 49063182 49064941 + 0.748657792243868 NA 5' UTR (NM_001145164, exon 1 of 2) 5' UTR (NM_001145164, exon 1 of 2) 151 NM_001145164 100039796 Mm.482363 NM_001145164 ENSMUSG00000078921 Tgtp2 OTTMUSG00000005537|TGTP T cell specific GTPase 2 protein-coding common_peak2_185_1513_0.0732795420882137_10.6007892610298_0.748517453043998 chr15 101283300 101285096 + 0.748517453043998 NA promoter-TSS (NM_026566) promoter-TSS (NM_026566) -103 NM_026566 68118 Mm.482360 NM_026566 ENSMUSG00000037204 Atg101 9430023L20Rik|AA407441|AU022967 autophagy related 101 protein-coding common_peak2_232_2008_0.0638497121405575_11.0041867048036_0.748471065388766 chr14 55883898 55886541 + 0.748471065388766 NA promoter-TSS (NM_019820) promoter-TSS (NM_019820) 250 NM_027143 219094 Mm.37592 NM_027143 ENSMUSG00000047153 Khnyn 6330555F21|9130227C08Rik|AI605259|Kiaa0323|mKIAA0323 KH and NYN domain containing protein-coding common_peak1_232_2008_0.0638497121405575_11.0041867048036_0.748471065388766 chr12 102877360 102878961 + 0.748471065388766 NA intron (NM_172806, intron 1 of 11) CpG 246 NM_172806 238386 Mm.63456 NM_172806 ENSMUSG00000041702 Btbd7 5730507E09Rik|8030448M07|E130118E17Rik|FUP1|mKIAA1525 BTB (POZ) domain containing 7 protein-coding common_peak1_212_1794_0.0675259332898879_10.8435310953554_0.748306464054959 chr7 25679824 25681569 + 0.748306464054959 NA promoter-TSS (NM_172148) promoter-TSS (NM_172148) -462 NM_172148 232987 Mm.22849 NM_172148 ENSMUSG00000063439 B9d2 stumpy B9 protein domain 2 protein-coding common_peak2_458_4966_-0.0422192220032152_12.2570494204356_0.748293581847288 chr16 4877276 4881672 + 0.748293581847288 NA intron (NM_145359, intron 1 of 2) CpG 377 NM_145359 207740 Mm.268895 NM_145359 ENSMUSG00000039568 Ubald1 1500031H01Rik|BC013706|Fam100a UBA-like domain containing 1 protein-coding common_peak2_324_3045_0.0523198807239229_11.5988601668493_0.748056676377853 chr5 124350924 124355377 + 0.748056676377853 NA intron (NM_013812, intron 1 of 3) intron (NM_013812, intron 1 of 3) 1478 NM_013812 13445 Mm.391838 NM_013812 ENSMUSG00000029394 Cdk2ap1 Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein-coding common_peak1_42_298_-0.178274503944154_8.13486442222603_0.747961597368475 chr9 37207580 37208219 + 0.747961597368475 NA promoter-TSS (NM_025464) promoter-TSS (NM_025464) -324 NM_025464 66279 Mm.41451 NM_025464 ENSMUSG00000032121 Tmem218 1810021J13Rik|AV004931 transmembrane protein 218 protein-coding common_peak1_185_1675_-0.0733774016254056_10.6741177328866_0.747863318589995 chr19 43752261 43753749 + 0.747863318589995 NA promoter-TSS (NM_001113562) promoter-TSS (NM_001113562) -5 NM_144874 226139 Mm.248237 NM_144874 ENSMUSG00000040018 Cox15 2900026G05Rik cytochrome c oxidase assembly protein 15 protein-coding common_peak2_81_633_-0.120283453887625_9.2481973031956_0.747593465508683 chrX 153497476 153499111 + 0.747593465508683 NA promoter-TSS (NM_018798) promoter-TSS (NM_018798) 61 NM_018798 54609 Mm.430772 NM_018798 ENSMUSG00000050148 Ubqln2 Chap1|Dsk2|HRIHFB2157|Plic-2|Plic2 ubiquilin 2 protein-coding common_peak1_73_561_-0.12803035782316_9.07041114130935_0.747384592226234 chrX 50805185 50806412 + 0.747384592226234 NA Intergenic Intergenic -35573 NM_133729 70415 Mm.46254 NM_133729 ENSMUSG00000031112 Stk26 2610018G03Rik|Mst4 serine/threonine kinase 26 protein-coding common_peak2_73_561_-0.12803035782316_9.07041114130935_0.747384592226234 chr10 83152714 83154878 + 0.747384592226234 NA intron (NM_021439, intron 2 of 2) intron (NM_021439, intron 2 of 2) 168299 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding unique_peak1_15_62_0.318973339625251_6.13676659331254_0.747189460713368 chr6 81923642 81924003 + 0.747189460713368 NA exon (NM_177884, exon 1 of 17) exon (NM_177884, exon 1 of 17) 153 NM_177884 330361 Mm.474487 NM_177884 ENSMUSG00000035125 Gcfc2 A130099G21|AW146020|GCF2|Tcf9 GC-rich sequence DNA binding factor 2 protein-coding common_peak1_15_62_0.318973339625251_6.13676659331254_0.747189460713368-3 chr19 47530966 47531371 + 0.747189460713368 NA intron (NM_175360, intron 2 of 9) intron (NM_175360, intron 2 of 9) 5852 NM_175360 108689 Mm.218048 NM_175360 ENSMUSG00000042694 Obfc1 0610009H20Rik|2310057J23Rik|AAF-44|AAF44|AI413458|RPA-32 oligonucleotide/oligosaccharide-binding fold containing 1 protein-coding common_peak1_15_62_0.318973339625251_6.13676659331254_0.747189460713368-6 chrX 73964032 73964416 + 0.747189460713368 NA intron (NM_008224, intron 1 of 25) intron (NM_008224, intron 1 of 25) 2133 NM_008224 15161 Mm.491126 NM_008224 ENSMUSG00000031386 Hcfc1 AW060991|HCF|HCF1 host cell factor C1 protein-coding common_peak1_15_62_0.318973339625251_6.13676659331254_0.747189460713368-2 chr11 79527904 79528309 + 0.747189460713368 NA 5' UTR (NM_001033711, exon 2 of 2) 5' UTR (NM_001033711, exon 2 of 2) 2503 NM_146023 101488212 Mm.439665 NM_146023 ENSMUSG00000070354 Gm21975 Evi2a-evi2b predicted gene 21975 protein-coding common_peak1_15_62_0.318973339625251_6.13676659331254_0.747189460713368 chr1 39367479 39367816 + 0.747189460713368 NA promoter-TSS (NM_001252219) promoter-TSS (NM_001252219) -204 NM_053257 114641 Mm.379302 NM_053257 ENSMUSG00000073702 Rpl31 Dts ribosomal protein L31 protein-coding common_peak1_15_62_0.318973339625251_6.13676659331254_0.747189460713368-4 chr2 127007060 127007415 + 0.747189460713368 NA Intergenic Intergenic -1474 NM_175550 108011 Mm.134045 NM_175550 ENSMUSG00000001998 Ap4e1 2310033A20Rik|9930028M04Rik|AV087807 adaptor-related protein complex AP-4, epsilon 1 protein-coding common_peak1_15_62_0.318973339625251_6.13676659331254_0.747189460713368-5 chr8 124268302 124268767 + 0.747189460713368 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 37140 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak2_18_118_-0.294453559911053_6.74759098335242_0.747145267513446 chr5 148509329 148510300 + 0.747145267513446 NA intron (NM_011908, intron 2 of 4) intron (NM_011908, intron 2 of 4) 42974 NM_011908 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG ubiquitin-like 3 protein-coding common_peak1_18_118_-0.294453559911053_6.74759098335242_0.747145267513446 chr13 37801498 37801945 + 0.747145267513446 NA Intergenic Intergenic -24317 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_279_2736_-0.0570970712823531_11.3898311837238_0.747126711760267 chr15 98830646 98832478 + 0.747126711760267 NA promoter-TSS (NM_016781) promoter-TSS (NM_016781) -54 NM_016781 19082 Mm.6670 NM_016781 ENSMUSG00000067713 Prkag1 AA571379|BB036179|Prkaac protein kinase, AMP-activated, gamma 1 non-catalytic subunit protein-coding common_peak1_34_177_0.205712283557136_7.57858957274497_0.747093369501476 chr10 116950483 116951249 + 0.747093369501476 NA promoter-TSS (NM_001003950) promoter-TSS (NM_001003950) 304 NR_038026 71086 Mm.214134 NR_038025 4933412E12Rik - RIKEN cDNA 4933412E12 gene ncRNA unique_peak2_30_205_-0.219818322448912_7.57659136595876_0.747093369501476 chr2 165201160 165202542 + 0.747093369501476 NA intron (NM_174988, intron 1 of 11) intron (NM_174988, intron 1 of 11) 32886 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak1_34_177_0.205712283557136_7.57858957274497_0.747093369501476-3 chr6 117840948 117841584 + 0.747093369501476 NA promoter-TSS (NM_177684) promoter-TSS (NM_177684) 24 NM_177684 232337 Mm.290847 NM_177684 ENSMUSG00000059689 Zfp637 AI646709|BC021601|Znf32 zinc finger protein 637 protein-coding common_peak2_34_177_0.205712283557136_7.57858957274497_0.747093369501476 chr8 119862046 119862929 + 0.747093369501476 NA intron (NM_146219, intron 1 of 4) CpG 182 NM_146219 234796 Mm.86446 NM_146219 ENSMUSG00000031828 Klhl36 - kelch-like 36 protein-coding common_peak1_34_177_0.205712283557136_7.57858957274497_0.747093369501476-2 chr11 5445049 5445668 + 0.747093369501476 NA promoter-TSS (NM_001080924) promoter-TSS (NM_001080924) -511 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding common_peak2_30_205_-0.219818322448912_7.57659136595876_0.747093369501476 chr2 23005612 23006988 + 0.747093369501476 NA intron (NM_001077190, intron 1 of 10) MLTR25A|LTR|ERVK 33941 NM_001077192 11308 Mm.205647 NM_007380 ENSMUSG00000058835 Abi1 E3B1|NAP1|Ssh3bp1|abi-1 abl-interactor 1 protein-coding common_peak1_23_107_0.258887965928627_6.88433148512778_0.747013112338864 chr12 102371630 102372085 + 0.747013112338864 NA intron (NM_001161365, intron 6 of 9) intron (NM_001161365, intron 6 of 9) 67840 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding common_peak1_23_107_0.258887965928627_6.88433148512778_0.747013112338864-2 chr4 134737958 134738447 + 0.747013112338864 NA Intergenic Intergenic 29802 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak2_23_107_0.258887965928627_6.88433148512778_0.747013112338864 chr3 51332961 51333653 + 0.747013112338864 NA intron (NM_001291059, intron 1 of 9) intron (NM_001291059, intron 1 of 9) 7337 NM_001291059 69257 Mm.131038 NM_023502 ENSMUSG00000037174 Elf2 2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2 E74-like factor 2 protein-coding common_peak1_23_107_0.258887965928627_6.88433148512778_0.747013112338864-3 chr9 101251290 101251726 + 0.747013112338864 NA intron (NM_001161362, intron 1 of 13) CpG 324 NM_001161362 235542 Mm.335386 NM_172144 ENSMUSG00000043154 Ppp2r3a 3222402P14Rik|A730042E07 protein phosphatase 2, regulatory subunit B'', alpha protein-coding unique_peak2_23_107_0.258887965928627_6.88433148512778_0.747013112338864 chr3 87804012 87804765 + 0.747013112338864 NA intron (NM_011832, intron 6 of 21) intron (NM_011832, intron 6 of 21) 7437 NM_011832 23920 Mm.42041 NM_011832 ENSMUSG00000005640 Insrr Irr insulin receptor-related receptor protein-coding common_peak1_68_429_0.134402470657335_8.81539408491813_0.74682111931145 chr8 94434399 94435285 + 0.74682111931145 NA non-coding (NR_015514, exon 1 of 3) non-coding (NR_015514, exon 1 of 3) 261 NR_015514 320377 Mm.486022 NR_015514 9330175E14Rik A630085K21 RIKEN cDNA 9330175E14 gene ncRNA common_peak1_40_282_-0.183214977766457_8.05305075394865_0.74665297187613 chr2 127070404 127071107 + 0.74665297187613 NA promoter-TSS (NM_026678) promoter-TSS (NM_026678) 98 NM_026678 109778 Mm.22028 NM_026678 ENSMUSG00000001999 Blvra 0610006A11Rik|2500001N03Rik|Blvr biliverdin reductase A protein-coding common_peak2_311_2894_0.0534327502903302_11.5260640080218_0.746542704940345 chr9 115608054 115613658 + 0.746542704940345 NA Intergenic RLTR20C2_MM|LTR|ERVK 229037 NR_130329 100316675 NR_130329 ENSMUSG00000080409 Mir467h Mirn467h|mmu-mir-467h microRNA 467h ncRNA common_peak1_84_561_0.117215527631565_9.19303408403671_0.746395309723187 chr5 135393789 135394628 + 0.746395309723187 NA exon (NM_148932, exon 1 of 13) exon (NM_148932, exon 1 of 13) 338 NM_148932 107939 Mm.28399 NM_148932 ENSMUSG00000053293 Pom121 2610027A18Rik|C80273|mKIAA0618 nuclear pore membrane protein 121 protein-coding common_peak1_293_2687_0.0553056414715627_11.4199702435145_0.746288858768928 chr12 116280368 116282406 + 0.746288858768928 NA exon (NM_028731, exon 1 of 22) exon (NM_028731, exon 1 of 22) 165 NM_028731 52635 Mm.273755 NM_028731 ENSMUSG00000021171 Esyt2 2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b extended synaptotagmin-like protein 2 protein-coding common_peak2_368_3815_-0.048133158633517_11.8737788766888_0.745875168019924 chr10 80051195 80055273 + 0.745875168019924 NA promoter-TSS (NM_001037741) promoter-TSS (NM_001037741) -254 NM_008162 625249 Mm.332810 NM_008162 ENSMUSG00000075706 Gpx4 GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx glutathione peroxidase 4 protein-coding common_peak2_58_431_-0.149361097121643_8.68020695360265_0.745824620341589 chr8 57353439 57355470 + 0.745824620341589 NA non-coding (NR_131041, exon 3 of 3) non-coding (NR_131041, exon 3 of 3) 22019 NR_131041 75996 Mm.399754 NR_131041 ENSMUSG00000097910 5033428I22Rik - RIKEN cDNA 5033428I22 gene ncRNA common_peak1_68_517_-0.13421296743976_8.94970180396668_0.745797452588385 chr1 91085696 91087069 + 0.745797452588385 NA intron (NM_008515, intron 7 of 22) intron (NM_008515, intron 7 of 22) 32938 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding unique_peak2_32_220_-0.210582611730552_7.68261125352616_0.745732347697182 chr13 67080774 67082029 + 0.745732347697182 NA intron (NM_001012325, intron 1 of 3) intron (NM_001012325, intron 1 of 3) 144 NM_001012448 432769 Mm.458849 NM_001012325 ENSMUSG00000058883 Zfp708 Rslcan11 zinc finger protein 708 protein-coding unique_peak2_32_220_-0.210582611730552_7.68261125352616_0.745732347697182-2 chr4 137344705 137346012 + 0.745732347697182 NA intron (NM_001243769, intron 1 of 5) intron (NM_001243769, intron 1 of 5) 12401 NM_009861 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak2_217_1847_0.0666055052999344_10.885051794066_0.745699483639747 chr3 60407654 60409902 + 0.745699483639747 NA Intergenic Intergenic -64052 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak2_76_494_0.125436825806094_9.01400312787002_0.745551509212148 chr2 150786126 150787426 + 0.745551509212148 NA promoter-TSS (NM_153781) promoter-TSS (NM_153781) -20 NM_153781 110078 Mm.222584 NM_153781 ENSMUSG00000033059 Pygb - brain glycogen phosphorylase protein-coding common_peak1_34_235_-0.201197334838308_7.78204438194269_0.745539584180923 chr17 26123460 26124194 + 0.745539584180923 NA TTS (NM_021793) TTS (NM_021793) 324 NM_024227 68611 Mm.273102 NM_024227 ENSMUSG00000024181 Mrpl28 1110015G04Rik|L28mt|MAAT1|MRP-L28|p15 mitochondrial ribosomal protein L28 protein-coding common_peak2_34_235_-0.201197334838308_7.78204438194269_0.745539584180923 chr4 118999495 119000789 + 0.745539584180923 NA Intergenic Intergenic 38175 NM_133892 100470 Mm.26698 NM_133892 ENSMUSG00000024903 Lao1 AW990848 L-amino acid oxidase 1 protein-coding common_peak1_578_6253_0.0363763046744978_12.6287516562623_0.74539923807621 chr4 48041429 48046039 + 0.74539923807621 NA Intergenic Intergenic -1571 NM_015743 18124 Mm.247261 NM_015743 ENSMUSG00000028341 Nr4a3 AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC nuclear receptor subfamily 4, group A, member 3 protein-coding common_peak1_133_1000_0.0899297525000868_10.012191135086_0.745387697554223 chr10 121739390 121740540 + 0.745387697554223 NA promoter-TSS (NM_173022) promoter-TSS (NM_173022) 28 NM_173022 270802 Mm.209172 NM_173022 ENSMUSG00000053684 BC048403 E030027L10 cDNA sequence BC048403 protein-coding common_peak1_51_372_-0.160998264427949_8.46253268804126_0.745381542989583 chr17 21707142 21708171 + 0.745381542989583 NA promoter-TSS (NM_001008501) promoter-TSS (NM_001008501) -85 NM_001008501 240034 Mm.34723 NM_001008501 ENSMUSG00000067928 Zfp760 9430018I06|BC029103 zinc finger protein 760 protein-coding common_peak1_123_1033_-0.0941136432079155_9.96696364871098_0.745378974028322 chr7 125444075 125445508 + 0.745378974028322 NA 5' UTR (NM_029842, exon 1 of 8) 5' UTR (NM_029842, exon 1 of 8) 171 NM_029842 77035 Mm.307239 NM_029842 ENSMUSG00000030752 Kdm8 3110005O21Rik|Jmjd5 lysine (K)-specific demethylase 8 protein-coding unique_peak2_23_153_-0.253011072602806_7.1402810043935_0.745101770542585 chr9 113792722 113793944 + 0.745101770542585 NA promoter-TSS (NM_001286603) promoter-TSS (NM_001286603) 3 NM_001286603 76499 Mm.222272 NM_029633 ENSMUSG00000033392 Clasp2 1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627 CLIP associating protein 2 protein-coding common_peak1_23_153_-0.253011072602806_7.1402810043935_0.745101770542585-2 chr2 117311986 117312516 + 0.745101770542585 NA intron (NM_011246, intron 2 of 16) intron (NM_011246, intron 2 of 16) 30626 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_23_153_-0.253011072602806_7.1402810043935_0.745101770542585 chr13 20098024 20098627 + 0.745101770542585 NA intron (NM_080288, intron 1 of 21) intron (NM_080288, intron 1 of 21) 7818 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding common_peak2_23_153_-0.253011072602806_7.1402810043935_0.745101770542585 chrX 134756513 134757274 + 0.745101770542585 NA promoter-TSS (NR_106061) promoter-TSS (NR_106061) 325 NM_027870 71703 Mm.67949 NM_027870 ENSMUSG00000049047 Armcx3 1200004E24Rik|AI450003|ALEX3 armadillo repeat containing, X-linked 3 protein-coding common_peak2_620_6821_0.0348853129399576_12.7534216960834_0.744832667867358 chr6 129613493 129630479 + 0.744832667867358 NA intron (NM_001286018, intron 1 of 7) intron (NM_001286018, intron 1 of 7) 697 NM_033078 27007 Mm.8217 NM_033078 ENSMUSG00000030149 Klrk1 D6H12S2489E|NKG2-D|Nkg2d killer cell lectin-like receptor subfamily K, member 1 protein-coding unique_peak2_15_98_-0.333103356954441_6.46280494160239_0.744766711958259 chr9 62838602 62839241 + 0.744766711958259 NA exon (NM_001033175, exon 1 of 7) exon (NM_001033175, exon 1 of 7) 134 NM_001033175 76524 Mm.283636 NM_001033175 ENSMUSG00000032245 Cln6 1810065L06Rik|AW743417|D9Bwg1455e|nclf ceroid-lipofuscinosis, neuronal 6 protein-coding common_peak1_15_98_-0.333103356954441_6.46280494160239_0.744766711958259-4 chr17 45973282 45973641 + 0.744766711958259 NA Intergenic Intergenic 51702 NM_001110267 22339 Mm.282184 NM_009505 ENSMUSG00000023951 Vegfa Vegf|Vpf vascular endothelial growth factor A protein-coding common_peak1_15_98_-0.333103356954441_6.46280494160239_0.744766711958259-3 chr17 23924959 23925376 + 0.744766711958259 NA Intergenic Intergenic 7709 NM_001077633 620253 Mm.390964 NM_001077633 ENSMUSG00000057417 Dcpp3 Dcpp-3|EG620253|SPT-3 demilune cell and parotid protein 3 protein-coding common_peak1_15_98_-0.333103356954441_6.46280494160239_0.744766711958259 chr1 182518144 182518465 + 0.744766711958259 NA promoter-TSS (NM_009794) promoter-TSS (NM_009794) -821 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak1_15_98_-0.333103356954441_6.46280494160239_0.744766711958259-2 chr11 23007236 23007677 + 0.744766711958259 NA Intergenic Intergenic -5931 NM_028672 73873 Mm.252406 NM_028672 ENSMUSG00000049811 Fam161a 4930430E16Rik family with sequence similarity 161, member A protein-coding common_peak1_76_588_-0.125402283057394_9.13942268230176_0.744698739626194 chr7 99482755 99483647 + 0.744698739626194 NA promoter-TSS (NR_002172) promoter-TSS (NR_002172) -269 NR_002172 449630 Mm.454449 NR_002172 ENSMUSG00000065822 Snord15a EG449630|Gm5774|RNU15A|Rnu15-a|U15A small nucleolar RNA, C/D box 15A snoRNA common_peak1_36_251_-0.197496272288507_7.87853178735566_0.74440456831497-2 chr6 99810976 99811422 + 0.74440456831497 NA Intergenic ORR1D2-int|LTR|ERVL-MaLR -84807 NM_001170419 50501 Mm.87365 NM_015768 ENSMUSG00000030069 Prok2 Bv8|PK2|Prok1 prokineticin 2 protein-coding common_peak1_36_251_-0.197496272288507_7.87853178735566_0.74440456831497 chr14 70792903 70793654 + 0.74440456831497 NA Intergenic Intergenic 18897 NM_010071 13449 Mm.243323 NM_010071 ENSMUSG00000022102 Dok2 DokR|Frip docking protein 2 protein-coding common_peak1_130_972_0.0907912670657609_9.97169162831399_0.74405078747569 chr8 122546944 122549226 + 0.74405078747569 NA intron (NM_001037298, intron 1 of 50) intron (NM_001037298, intron 1 of 50) 3244 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak2_114_824_0.0983160818386519_9.7374083500525_0.743935748646194 chr2 26901908 26904038 + 0.743935748646194 NA promoter-TSS (NM_009298) promoter-TSS (NM_009298) -160 NM_009298 20935 Mm.245577 NM_009298 ENSMUSG00000036160 Surf6 D2Wsu129e|Surf-6 surfeit gene 6 protein-coding common_peak1_71_453_0.131361496954465_8.89222923576815_0.743711564319562 chrX 104670098 104671184 + 0.743711564319562 NA intron (NM_175358, intron 1 of 11) intron (NM_175358, intron 1 of 11) 423 NM_175358 108672 Mm.30574 NM_175358 ENSMUSG00000033906 Zdhhc15 6030457O13Rik zinc finger, DHHC domain containing 15 protein-coding common_peak2_90_716_-0.113484265981857_9.42908717571098_0.743464264586385 chr6 6577578 6579260 + 0.743464264586385 NA intron (NM_009169, intron 1 of 2) CpG 239 NM_009169 20422 Mm.2469 NM_009169 ENSMUSG00000042541 Shfm1 DSS1|Shfdg1|Shfg split hand/foot malformation (ectrodactyly) type 1 protein-coding unique_peak2_11_71_-0.382761844536573_5.97854407917403_0.743411445750435 chr7 30738235 30738944 + 0.743411445750435 NA intron (NM_001290631, intron 1 of 10) intron (NM_001290631, intron 1 of 10) 818 NM_008085 14447 Mm.436562 NM_008085 ENSMUSG00000061099 Gapdhs Gapd-s|Gapds glyceraldehyde-3-phosphate dehydrogenase, spermatogenic protein-coding common_peak1_79_519_0.121991036975034_9.08336333151597_0.743268136759862 chr19 46863689 46864584 + 0.743268136759862 NA intron (NM_001102471, intron 4 of 6) intron (NM_001102471, intron 4 of 6) 98215 NM_029810 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak2_56_413_-0.148988237949151_8.61899283852475_0.74325099931276 chrX 152335939 152337626 + 0.74325099931276 NA TTS (NM_029836) TTS (NM_029836) 5702 NM_029836 52808 Mm.9997 NM_029836 ENSMUSG00000041096 Tspyl2 CDA1|CINAP|DENTT|DXBwg1396e|DXHXS1008E|E130307F10Rik TSPY-like 2 protein-coding common_peak2_183_1493_0.0733333048633416_10.5816310852209_0.743237508116414 chr11 103114767 103116109 + 0.743237508116414 NA promoter-TSS (NM_138753) promoter-TSS (NM_138753) -887 NM_138753 192231 Mm.8763 NM_138753 ENSMUSG00000048878 Hexim1 7330426E13Rik|CLP-1|Clp1|HIS1 hexamethylene bis-acetamide inducible 1 protein-coding common_peak1_49_355_-0.163105927643658_8.39418046714457_0.742968344395155-2 chr17 83846428 83847321 + 0.742968344395155 NA promoter-TSS (NM_025325) promoter-TSS (NM_025325) -84 NM_025325 107766 Mm.30100 NM_025325 ENSMUSG00000000673 Haao 0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding common_peak1_49_355_-0.163105927643658_8.39418046714457_0.742968344395155 chr15 102458306 102459016 + 0.742968344395155 NA promoter-TSS (NM_025385) promoter-TSS (NM_025385) -509 NM_001170911 66151 Mm.393955 NM_025385 ENSMUSG00000023048 Prr13 1110020C13Rik|2010324E22Rik proline rich 13 protein-coding unique_peak2_49_355_-0.163105927643658_8.39418046714457_0.742968344395155 chr10 80658024 80659783 + 0.742968344395155 NA Intergenic Intergenic -1832 NM_145361 208198 Mm.60720 NM_145361 ENSMUSG00000003344 Btbd2 2610037C03Rik|4930512K17Rik BTB (POZ) domain containing 2 protein-coding common_peak2_49_355_-0.163105927643658_8.39418046714457_0.742968344395155 chrX 73921039 73922720 + 0.742968344395155 NA promoter-TSS (NM_019870) promoter-TSS (NM_019870) 65 NM_001310538 56292 Mm.246654 NM_019870 ENSMUSG00000031388 Naa10 2310039H09Rik|Ard1|Ard1a|Te2 N(alpha)-acetyltransferase 10, NatA catalytic subunit protein-coding common_peak2_127_944_0.0919196775758007_9.93013035789633_0.742858412256932 chr10 81377445 81379563 + 0.742858412256932 NA promoter-TSS (NM_019757) promoter-TSS (NM_019757) -134 NM_019757 56371 Mm.24202 NM_019757 ENSMUSG00000020235 Fzr1 AW108046|Cdh1|FZR|FZR2|Fyr|HCDH|HCDH1 fizzy/cell division cycle 20 related 1 (Drosophila) protein-coding common_peak1_66_413_0.137056742650399_8.76201532882452_0.742501591884336 chr8 91076410 91077809 + 0.742501591884336 NA intron (NM_001282000, intron 3 of 20) PB1D10|SINE|Alu 7052 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 retinoblastoma-like 2 protein-coding common_peak1_105_857_-0.102479760870077_9.69359395706451_0.742233339962994 chr15 37960253 37961241 + 0.742233339962994 NA intron (NM_199476, intron 1 of 8) CpG 308 NM_199476 382985 Mm.24738 NM_199476 ENSMUSG00000022292 Rrm2b p53R2 ribonucleotide reductase M2 B (TP53 inducible) protein-coding common_peak1_187_1696_-0.0724151397439314_10.6925632796707_0.742192362399599 chr15 79693183 79695403 + 0.742192362399599 NA intron (NM_013818, intron 2 of 11) intron (NM_013818, intron 2 of 11) 3397 NM_013818 14904 Mm.19080 NM_013818 ENSMUSG00000042535 Gtpbp1 AL022987|AW045683|C85212|GP-1|Gtpbp GTP binding protein 1 protein-coding common_peak1_47_268_0.168925416721828_8.15592507091754_0.741681363587928 chr2 120563095 120563903 + 0.741681363587928 NA intron (NM_011743, intron 1 of 21) CpG 332 NM_011743 20402 Mm.485295 NM_011743 ENSMUSG00000027288 Zfp106 Cd-1|D2Dcr28|H3a|Sh3bp3|Znf106|sirm zinc finger protein 106 protein-coding common_peak2_323_3035_0.0516106299501242_11.5937613903905_0.741671215443367 chr17 28690491 28694521 + 0.741671215443367 NA promoter-TSS (NM_001168513) promoter-TSS (NM_001168513) -62 NM_001168513 26416 Mm.311337 NM_011951 ENSMUSG00000053436 Mapk14 CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha mitogen-activated protein kinase 14 protein-coding common_peak2_82_544_0.119393449504059_9.14980914441632_0.74157244372473 chr1 60565844 60567607 + 0.74157244372473 NA promoter-TSS (NM_001045513) promoter-TSS (NM_001045513) 40 NM_001045513 77300 Mm.440325 NM_001045513 ENSMUSG00000026014 Raph1 9430025M21Rik|C730009O10Rik|Lpd Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding common_peak2_158_1388_-0.0799546023849942_10.3998535827889_0.741165815104623 chr4 6216193 6219592 + 0.741165815104623 NA 3' UTR (NM_026534, exon 8 of 8) 3' UTR (NM_026534, exon 8 of 8) 26787 NM_026534 68053 Mm.404043 NM_026534 ENSMUSG00000028243 Ubxn2b 3110003A22Rik|6430407D20Rik|AI451665|p37 UBX domain protein 2B protein-coding common_peak2_134_1010_0.0887458718149006_10.0259402178105_0.741123885145773 chr1 75191217 75193318 + 0.741123885145773 NA promoter-TSS (NR_109938) promoter-TSS (NR_109938) 107 NR_051999 52231 Mm.259326 NM_026187 ENSMUSG00000026199 Ankzf1 1300008P06Rik|2810025E10Rik|D1Ertd161e ankyrin repeat and zinc finger domain containing 1 protein-coding common_peak2_269_2618_-0.0578748794463255_11.3258629046274_0.741105676104218 chr1 88652591 88658352 + 0.741105676104218 NA Intergenic Intergenic 46720 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_82_642_-0.119169058159599_9.26909039824815_0.741075978815878 chr2 11159275 11160800 + 0.741075978815878 NA Intergenic Intergenic -12345 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_47_338_-0.164753683857892_8.3227646212074_0.740985337830824 chr3 68788695 68789609 + 0.740985337830824 NA Intergenic Intergenic -80434 NM_001167996 68725 Mm.45741 NM_001167996 ENSMUSG00000046999 1110032F04Rik AI115547 RIKEN cDNA 1110032F04 gene protein-coding common_peak1_287_2829_-0.0554517311011526_11.4388604721687_0.740513902014963 chr6 31112634 31115849 + 0.740513902014963 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -51148 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_85_569_0.1175213723882_9.2135787952462_0.740388633393222 chrX 73787052 73788040 + 0.740388633393222 NA promoter-TSS (NM_008323) promoter-TSS (NM_008323) 403 NM_009279 20832 Mm.831 NM_009279 ENSMUSG00000002014 Ssr4 AW743063|C78062|Trap signal sequence receptor, delta protein-coding common_peak2_54_320_0.154861531263613_8.40386025275411_0.740354574759163 chr5 149635597 149636879 + 0.740354574759163 NA promoter-TSS (NM_013559) promoter-TSS (NM_013559) 77 NM_013559 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding common_peak1_377_3679_0.0468659363470447_11.8689230191179_0.740191690472318 chr10 111163893 111166191 + 0.740191690472318 NA 5' UTR (NM_175489, exon 1 of 24) 5' UTR (NM_175489, exon 1 of 24) 240 NM_175489 237542 Mm.220204 NM_175489 ENSMUSG00000020189 Osbpl8 AA536976|AA536995|C730029P18Rik|D330025H14Rik|ORP-8 oxysterol binding protein-like 8 protein-coding common_peak1_121_1013_-0.0947101747700128_9.93848684961834_0.740156543616641 chr3 145118294 145119492 + 0.740156543616641 NA intron (NM_001162539, intron 1 of 14) CpG 293 NM_025714 52184 Mm.259105 NM_025714 ENSMUSG00000028256 Odf2l 4733401D09Rik|9630045K08Rik|D3Ertd250e outer dense fiber of sperm tails 2-like protein-coding common_peak1_85_669_-0.115677803904831_9.33017838339272_0.739994940824092 chr11 106255606 106256625 + 0.739994940824092 NA promoter-TSS (NM_008950) promoter-TSS (NM_008950) -70 NM_008950 19184 Mm.272361 NM_008950 ENSMUSG00000020708 Psmc5 mSUG1 protease (prosome, macropain) 26S subunit, ATPase 5 protein-coding common_peak1_54_396_-0.151704178757042_8.55714310776444_0.739846430069957 chr7 139388344 139388892 + 0.739846430069957 NA promoter-TSS (NM_183144) promoter-TSS (NM_183144) -491 NM_183144 212111 Mm.28308 NM_183144 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A protein-coding common_peak2_155_1357_-0.0810996922641589_10.3667179181127_0.739244703975201 chr1 106170803 106173252 + 0.739244703975201 NA promoter-TSS (NR_040630) promoter-TSS (NR_040630) 158 NM_133821 98432 Mm.24115 NM_133821 ENSMUSG00000044340 Phlpp1 AI836256|Phlpp|Plekhe1|SCOP|mKIAA0606 PH domain and leucine rich repeat protein phosphatase 1 protein-coding common_peak2_88_595_0.113849848302026_9.27609344461317_0.73894556606378 chr13 55512485 55514101 + 0.73894556606378 NA intron (NR_104287, intron 1 of 8) CpG 153 NM_026131 67399 Mm.275648 NM_026131 ENSMUSG00000021493 Pdlim7 LMP PDZ and LIM domain 7 protein-coding common_peak1_115_834_0.0962555495238657_9.75376016212335_0.738804547704338 chr4 11253392 11254312 + 0.738804547704338 NA intron (NM_178112, intron 1 of 27) CpG 407 NM_178112 72656 Mm.246713 NM_178112 ENSMUSG00000040738 Ints8 2810013E07Rik|AV063769|D130008D20Rik integrator complex subunit 8 protein-coding common_peak1_69_525_-0.130860963582412_8.9734885075011_0.738711801084161 chr19 36374911 36375786 + 0.738711801084161 NA Intergenic Intergenic -3719 NM_029508 76073 Mm.259180 NM_029508 ENSMUSG00000024805 Pcgf5 0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127 polycomb group ring finger 5 protein-coding common_peak2_69_525_-0.130860963582412_8.9734885075011_0.738711801084161 chr18 38405572 38407377 + 0.738711801084161 NA Intergenic Intergenic -12501 NM_022996 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding common_peak1_232_2193_-0.0632362495293446_11.0677296856385_0.738545348944599 chr4 123562880 123565437 + 0.738545348944599 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -52262 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak1_45_254_0.170719678421007_8.07971327606936_0.73840561134386-2 chr2 31136956 31137756 + 0.73840561134386 NA intron (NM_001177648, intron 1 of 16) intron (NM_001177648, intron 1 of 16) 4652 NM_001177649 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak2_45_254_0.170719678421007_8.07971327606936_0.73840561134386 chr9 114389986 114391055 + 0.73840561134386 NA exon (NM_019922, exon 1 of 7) exon (NM_019922, exon 1 of 7) 192 NM_019922 56693 Mm.20904 NM_019922 ENSMUSG00000032431 Crtap 5730529N23Rik|CASP|Leprel3|P3h5 cartilage associated protein protein-coding common_peak1_45_254_0.170719678421007_8.07971327606936_0.73840561134386 chr12 79006778 79007446 + 0.73840561134386 NA 5' UTR (NM_178745, exon 1 of 3) 5' UTR (NM_178745, exon 1 of 3) 165 NM_178745 268567 Mm.341747 NM_178745 ENSMUSG00000046157 Tmem229b 6330442E10Rik|9830138K24|AU019070 transmembrane protein 229B protein-coding common_peak1_419_4195_0.0440058904722633_12.0568019078134_0.738374275609966 chr8 25273608 25276122 + 0.738374275609966 NA Intergenic Intergenic 31405 NR_040352 74489 Mm.256468 NR_040352 ENSMUSG00000110140 5430421F17Rik - RIKEN cDNA 5430421F17 gene ncRNA common_peak1_25_120_0.236558007366337_7.03714224095776_0.738359885703401 chr13 49271872 49272435 + 0.738359885703401 NA intron (NM_015759, intron 14 of 17) intron (NM_015759, intron 14 of 17) -23447 NM_028340 66329 Mm.34308 NM_025491 ENSMUSG00000021384 Susd3 1700017I11Rik|2810440J20Rik sushi domain containing 3 protein-coding common_peak1_25_120_0.236558007366337_7.03714224095776_0.738359885703401-3 chr4 16167995 16168627 + 0.738359885703401 NA intron (NR_045765, intron 1 of 6) L2c|LINE|L2 4201 NR_045765 100415915 Mm.387180 NR_045765 ENSMUSG00000085112 A530072M11Rik - RIKEN cDNA gene A530072M11 ncRNA common_peak1_25_120_0.236558007366337_7.03714224095776_0.738359885703401-2 chr2 165538894 165539382 + 0.738359885703401 NA Intergenic Intergenic 35241 NM_130451 170441 Mm.34147 NM_130451 ENSMUSG00000027661 Slc2a10 AA450473|Glut10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding common_peak1_45_322_-0.170317239414059_8.25023173498689_0.738061190320812-2 chr13 118386652 118387384 + 0.738061190320812 NA exon (NM_021556, exon 1 of 5) exon (NM_021556, exon 1 of 5) 234 NM_021556 59054 Mm.143810 NM_021556 ENSMUSG00000021731 Mrps30 2610020A16Rik|AA968347|PAP|Pdcd9 mitochondrial ribosomal protein S30 protein-coding common_peak1_45_322_-0.170317239414059_8.25023173498689_0.738061190320812 chr1 131204699 131205445 + 0.738061190320812 NA intron (NM_018750, intron 2 of 5) intron (NM_018750, intron 2 of 5) -4887 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak2_77_503_0.122275837294302_9.03841784214707_0.737940732162276 chr6 68250577 68253869 + 0.737940732162276 NA Intergenic RLTR3_Mm|LTR|ERVK -686524 NR_003100 75070 Mm.463364 NR_003100 4930515G16Rik - myc induced nuclear antigen pseudogene pseudo common_peak2_77_503_0.122275837294302_9.03841784214707_0.737940732162276-2 chr9 92377937 92380785 + 0.737940732162276 NA Intergenic L1M2|LINE|L1 69984 NM_001033184 78459 Mm.179195 NM_001033184 ENSMUSG00000074139 1700057G04Rik - RIKEN cDNA 1700057G04 gene protein-coding common_peak1_25_168_-0.245458191641252_7.27815034046156_0.73789034726448 chr11 11714357 11714919 + 0.73789034726448 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 24461 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_25_168_-0.245458191641252_7.27815034046156_0.73789034726448-2 chr13 20097496 20098005 + 0.73789034726448 NA intron (NM_080288, intron 1 of 21) intron (NM_080288, intron 1 of 21) 7243 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding common_peak1_145_1116_0.0835178670886716_10.1671724040276_0.737653983788888 chr2 5844305 5845810 + 0.737653983788888 NA promoter-TSS (NM_016918) promoter-TSS (NM_016918) 23 NM_016918 53893 Mm.251904 NM_016918 ENSMUSG00000025817 Nudt5 - nudix (nucleoside diphosphate linked moiety X)-type motif 5 protein-coding common_peak2_59_359_0.143415647454386_8.56356092005687_0.737525656686923 chr2 92463877 92465511 + 0.737525656686923 NA Intergenic ORR1G|LTR|ERVL-MaLR -4176 NM_145832 228368 Mm.273990 NM_145832 ENSMUSG00000049922 Slc35c1 E430007K15Rik|fuct1 solute carrier family 35, member C1 protein-coding common_peak1_59_359_0.143415647454386_8.56356092005687_0.737525656686923 chr2 153214409 153215639 + 0.737525656686923 NA Intergenic Intergenic 10417 NM_198617 241732 Mm.277243 NM_198617 ENSMUSG00000074671 Tspyl3 AW212607|Gm36 TSPY-like 3 protein-coding common_peak1_64_398_0.136669584110551_8.70857972827762_0.737315097676621 chr2 135658479 135659472 + 0.737315097676621 NA Intergenic Intergenic -75755 NR_015544 320684 Mm.421433 NR_015544 ENSMUSG00000085631 9630028H03Rik - RIKEN cDNA 9630028H03 gene ncRNA common_peak1_97_673_0.106883766915182_9.45004666463945_0.737136206510765 chr14 61648915 61650068 + 0.737136206510765 NA intron (NR_028264, intron 1 of 6) intron (NR_028264, intron 1 of 6) -17381 NR_029733 387174 NR_029733 ENSMUSG00000093007 Mir15a Mirn15a|mir-15a|mmu-mir-15a microRNA 15a ncRNA common_peak1_103_726_0.10283431309405_9.55722871046662_0.737006309572458 chr13 100832442 100833495 + 0.737006309572458 NA intron (NM_022885, intron 1 of 15) intron (NM_022885, intron 1 of 15) 459 NM_022885 69048 Mm.402215 NM_022885 ENSMUSG00000021629 Slc30a5 1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1 solute carrier family 30 (zinc transporter), member 5 protein-coding common_peak2_52_305_0.158353922750461_8.33656480406788_0.736894806983192 chr9 77543655 77545412 + 0.736894806983192 NA promoter-TSS (NM_172528) promoter-TSS (NM_172528) 319 NM_001146048 214345 Mm.28534 NM_172528 ENSMUSG00000032352 Lrrc1 A430093J20Rik|AU016091|D030059I21|mKIAA4018 leucine rich repeat containing 1 protein-coding common_peak2_52_379_-0.154113842887835_8.49279868688703_0.736733257558259-2 chrX 8192283 8193675 + 0.736733257558259 NA TTS (NM_023638) TTS (NM_023638) 533 NM_007898 13595 Mm.27183 NM_007898 ENSMUSG00000031168 Ebp AI255399|Pabp|SI|Td|mSI phenylalkylamine Ca2+ antagonist (emopamil) binding protein protein-coding common_peak2_52_379_-0.154113842887835_8.49279868688703_0.736733257558259 chr15 5509497 5511917 + 0.736733257558259 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 14389 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak2_254_2250_0.0594260225516212_11.16606335273_0.736490073943111 chr10 34280494 34283547 + 0.736490073943111 NA promoter-TSS (NM_009433) promoter-TSS (NM_009433) -170 NM_009433 22110 Mm.20445 NM_009433 ENSMUSG00000047514 Tspyl1 Tspyl testis-specific protein, Y-encoded-like 1 protein-coding common_peak1_20_90_0.269680003599801_6.6426346419986_0.73605121260799-3 chr5 72802374 72802813 + 0.73605121260799 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) -49816 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding unique_peak2_20_90_0.269680003599801_6.6426346419986_0.73605121260799 chr10 125370044 125370764 + 0.73605121260799 NA Intergenic RCHARR1|DNA|hAT-Charlie -41869 NM_011391 20503 Mm.29161 NM_011391 ENSMUSG00000020102 Slc16a7 4921534N07Rik|Mct2 solute carrier family 16 (monocarboxylic acid transporters), member 7 protein-coding common_peak1_20_90_0.269680003599801_6.6426346419986_0.73605121260799-2 chr2 91042139 91042635 + 0.73605121260799 NA intron (NM_009023, intron 3 of 7) intron (NM_009023, intron 3 of 7) 6760 NM_009023 19400 Mm.1272 NM_009023 ENSMUSG00000002104 Rapsn 43kDa|Nraps|Raps|rapsyn receptor-associated protein of the synapse protein-coding common_peak1_20_90_0.269680003599801_6.6426346419986_0.73605121260799 chr12 73720770 73721365 + 0.73605121260799 NA intron (NM_001313977, intron 10 of 14) intron (NM_001313977, intron 10 of 14) 136271 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding unique_peak2_20_132_-0.277807791702692_6.91637853964984_0.735924665659996 chr4 155420877 155421745 + 0.735924665659996 NA 3' UTR (NM_001166029, exon 5 of 5) 3' UTR (NM_001166029, exon 5 of 5) 393 NR_102287 641454 Mm.150322 NR_102283 ENSMUSG00000084803 5830444B04Rik - RIKEN cDNA 5830444B04 gene ncRNA common_peak2_20_132_-0.277807791702692_6.91637853964984_0.735924665659996 chr16 32434334 32434983 + 0.735924665659996 NA intron (NM_001163160, intron 1 of 8) B1_Mur4|SINE|Alu 3428 NM_001163160 13026 Mm.98775 NM_009981 ENSMUSG00000005615 Pcyt1a CTalpha|Cctalpha|Ctpct|Cttalpha phosphate cytidylyltransferase 1, choline, alpha isoform protein-coding common_peak1_27_132_0.231282314516736_7.17092359275956_0.735828534700291 chr19 6299777 6300281 + 0.735828534700291 NA TTS (NM_010119) TTS (NM_010119) -6428 NM_001033342 240505 Mm.329622 NM_001033342 ENSMUSG00000024769 Cdc42bpg BC046418|MRCKgamma CDC42 binding protein kinase gamma (DMPK-like) protein-coding common_peak1_27_132_0.231282314516736_7.17092359275956_0.735828534700291-2 chr7 58828922 58829373 + 0.735828534700291 NA 3' UTR (NM_009728, exon 21 of 21) 3' UTR (NM_009728, exon 21 of 21) 170945 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_27_182_-0.229135088266117_7.40113229415098_0.735753792821899 chr4 152457952 152458444 + 0.735753792821899 NA intron (NM_010598, intron 1 of 15) intron (NM_010598, intron 1 of 15) -9343 NM_001252656 16498 Mm.388924 NM_010598 ENSMUSG00000028931 Kcnab2 F5|I2rf5|Kcnb3|kv-beta-2 potassium voltage-gated channel, shaker-related subfamily, beta member 2 protein-coding common_peak2_43_306_-0.175684791489871_8.17425244962524_0.735575283044736 chr2 155356679 155358044 + 0.735575283044736 NA promoter-TSS (NM_001004721) promoter-TSS (NM_001004721) 63 NM_001004721 228812 Mm.5434 NM_001004721 ENSMUSG00000038383 Pigu 5430426F17Rik|BC028278|Cdc91l1 phosphatidylinositol glycan anchor biosynthesis, class U protein-coding common_peak2_72_462_0.127450643125393_8.91859370482293_0.735474151740952 chr9 92288117 92291065 + 0.735474151740952 NA intron (NM_008880, intron 3 of 7) intron (NM_008880, intron 3 of 7) 13989 NM_001195084 18828 Mm.10306 NM_008880 ENSMUSG00000032372 Plscr2 - phospholipid scramblase 2 protein-coding common_peak2_83_651_-0.118028888059866_9.28971371020114_0.734746047745479 chr7 3664805 3666329 + 0.734746047745479 NA TTS (NM_181820) TTS (NM_181820) 273 NM_027203 69757 Mm.389782 NM_027203 ENSMUSG00000078813 Leng1 1500001K17Rik leukocyte receptor cluster (LRC) member 1 protein-coding common_peak1_238_2074_0.0622088929709292_11.0500000676071_0.734539074352232 chr12 101016169 101018773 + 0.734539074352232 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 4297 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak2_57_343_0.149010870996827_8.50077019020051_0.734323836733474 chr4 155802920 155804278 + 0.734323836733474 NA promoter-TSS (NM_025570) promoter-TSS (NM_025570) -19 NM_025570 66448 Mm.23825 NM_025570 ENSMUSG00000029066 Mrpl20 2610008D01Rik|4930425I20Rik mitochondrial ribosomal protein L20 protein-coding common_peak1_57_343_0.149010870996827_8.50077019020051_0.734323836733474 chr2 103661303 103662275 + 0.734323836733474 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 95479 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_116_843_0.0959787770539595_9.76908857723416_0.734287090678723 chr3 41082108 41084136 + 0.734287090678723 NA promoter-TSS (NM_027558) promoter-TSS (NM_027558) -76 NM_027558 70804 Mm.40321 NM_027558 ENSMUSG00000049940 Pgrmc2 4631434O19Rik|5730409G06Rik|DG6|PMBP progesterone receptor membrane component 2 protein-coding common_peak2_153_1194_0.0805389490913111_10.2630643774138_0.733969520226919 chr5 140703731 140705976 + 0.733969520226919 NA promoter-TSS (NM_001276287) promoter-TSS (NM_001276287) -158 NM_181066 231841 Mm.271932 NM_172724 ENSMUSG00000000148 Brat1 AA881470|Baat1 BRCA1-associated ATM activator 1 protein-coding common_peak1_251_2409_-0.0599836487928318_11.2048256067209_0.733837063886517 chr12 100198853 100201266 + 0.733837063886517 NA promoter-TSS (NM_001313934) promoter-TSS (NM_001313934) -85 NM_001313934 12313 Mm.285993 NM_009790 ENSMUSG00000001175 Calm1 AI256814|AI327027|AI461935|AL024000|CaM|Calm calmodulin 1 protein-coding common_peak1_190_1728_-0.0713506476554873_10.7200468298145_0.733822473152009 chr14 27378667 27380986 + 0.733822473152009 NA intron (NM_001289688, intron 3 of 9) intron (NM_001289688, intron 3 of 9) 18437 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_75_578_-0.123830712219632_9.11550418187942_0.733691808926461 chr2 32866895 32868812 + 0.733691808926461 NA Intergenic Intergenic -8281 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_75_578_-0.123830712219632_9.11550418187942_0.733691808926461 chr2 37443317 37444035 + 0.733691808926461 NA promoter-TSS (NM_199025) promoter-TSS (NM_199025) 391 NM_146121 227800 Mm.383192 NM_146121 ENSMUSG00000035437 Rabgap1 Gapcena|mKIAA4104 RAB GTPase activating protein 1 protein-coding common_peak1_75_578_-0.123830712219632_9.11550418187942_0.733691808926461-2 chr2 121473420 121474356 + 0.733691808926461 NA exon (NM_001081975, exon 1 of 7) exon (NM_001081975, exon 1 of 7) 135 NM_001081975 100034361 Mm.270393 NM_001081975 ENSMUSG00000048222 Mfap1b - microfibrillar-associated protein 1B protein-coding common_peak2_67_508_-0.134760962728812_8.92414136471129_0.733685090410677 chr11 67587725 67589783 + 0.733685090410677 NA intron (NM_001109657, intron 1 of 13) intron (NM_001109657, intron 1 of 13) 2254 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_113_934_-0.0977115240384681_9.81996679275576_0.733482217583155 chr5 130171776 130172557 + 0.733482217583155 NA intron (NM_001199059, intron 1 of 8) CpG 347 NM_001199059 56715 Mm.288639 NM_019983 ENSMUSG00000025340 Rabgef1 Rab5ef|Rabex5|Rin2 RAB guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_113_816_0.0969187625908479_9.72265164944111_0.733353536302677 chr17 35666814 35668526 + 0.733353536302677 NA promoter-TSS (NM_175137) promoter-TSS (NM_175137) -78 NM_175137 68915 Mm.32002 NM_175137 ENSMUSG00000038838 Vars2 1190004I24Rik|Vars2l|mKIAA1885 valyl-tRNA synthetase 2, mitochondrial protein-coding common_peak1_113_816_0.0969187625908479_9.72265164944111_0.733353536302677 chr10 128321839 128323116 + 0.733353536302677 NA promoter-TSS (NM_019953) promoter-TSS (NM_019953) 18 NM_019953 56530 Mm.44220 NM_019953 ENSMUSG00000025381 Cnpy2 5330432A10Rik|AW229003|D10Bwg1546e|Tmem4|Zsig9 canopy FGF signaling regulator 2 protein-coding common_peak2_62_382_0.140408578026825_8.65140487093837_0.733342253849063 chr4 107066176 107067676 + 0.733342253849063 NA promoter-TSS (NM_025500) promoter-TSS (NM_025500) -60 NM_025500 56280 Mm.29517 NM_025500 ENSMUSG00000028622 Mrpl37 2300004O14Rik|AI132596|MRP-L2|Rpml2 mitochondrial ribosomal protein L37 protein-coding unique_peak2_29_197_-0.220700187481906_7.51900652633866_0.732756011968719 chr2 126468011 126469448 + 0.732756011968719 NA intron (NM_001080944, intron 3 of 27) intron (NM_001080944, intron 3 of 27) 22824 NM_001080944 241633 Mm.222235 NM_001080944 ENSMUSG00000060131 Atp8b4 A530043E15|Im ATPase, class I, type 8B, member 4 protein-coding unique_peak2_29_197_-0.220700187481906_7.51900652633866_0.732756011968719-2 chr2 165694290 165695628 + 0.732756011968719 NA intron (NM_001271962, intron 5 of 15) intron (NM_001271962, intron 5 of 15) 39661 NM_010165 14049 Mm.282719 NM_010165 ENSMUSG00000017897 Eya2 Eab1 EYA transcriptional coactivator and phosphatase 2 protein-coding common_peak1_29_197_-0.220700187481906_7.51900652633866_0.732756011968719 chr2 29935518 29936040 + 0.732756011968719 NA intron (NM_028923, intron 1 of 15) intron (NM_028923, intron 1 of 15) 370 NM_028923 74412 Mm.275121 NM_028923 ENSMUSG00000019715 Gle1 4933405K21Rik|AA553313|Gle1l GLE1 RNA export mediator (yeast) protein-coding common_peak2_50_363_-0.16012386307124_8.42773270866308_0.732695624049677 chr19 53546901 53548651 + 0.732695624049677 NA Intergenic Intergenic 18458 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak1_110_789_0.09820932430023_9.67481350521458_0.732622880560629 chr19 45574502 45576426 + 0.732622880560629 NA intron (NM_172639, intron 4 of 5) intron (NM_172639, intron 4 of 5) 14849 NM_172639 226162 Mm.21978 NM_172639 ENSMUSG00000041035 Dpcd 5330431N19Rik|Ndac deleted in primary ciliary dyskinesia protein-coding common_peak1_50_291_0.157846218247439_8.26874766800374_0.732388528877415 chr1 127230273 127231265 + 0.732388528877415 NA intron (NM_145128, intron 1 of 17) L1MB8|LINE|L1 25783 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_107_876_-0.101000843232425_9.72593261082852_0.732332301828281 chr11 87425646 87426970 + 0.732332301828281 NA intron (NM_031386, intron 1 of 30) intron (NM_031386, intron 1 of 30) -1283 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_29_145_0.218831873717686_7.29924049573886_0.732331144471833 chr19 57072326 57072803 + 0.732331144471833 NA intron (NM_001290813, intron 8 of 20) intron (NM_001290813, intron 8 of 20) 46460 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_39_274_-0.185541269594889_8.01051717361458_0.732234498687781 chr4 46525023 46525788 + 0.732234498687781 NA intron (NM_029077, intron 2 of 5) ORR1A2|LTR|ERVL-MaLR 10736 NM_029077 74735 Mm.240252 NM_029077 ENSMUSG00000039853 Trim14 5830400N10Rik|pub tripartite motif-containing 14 protein-coding common_peak2_39_274_-0.185541269594889_8.01051717361458_0.732234498687781 chr10 127120349 127121255 + 0.732234498687781 NA intron (NM_001171026, intron 1 of 14) intron (NM_001171026, intron 1 of 14) 358 NM_177614 216440 Mm.295246 NM_177614 ENSMUSG00000040462 Os9 4632413K17Rik|AU022351 amplified in osteosarcoma protein-coding common_peak1_92_630_0.109320525905041_9.35615645793507_0.73195487380609 chr8 13624033 13625357 + 0.73195487380609 NA intron (NM_009025, intron 2 of 23) intron (NM_009025, intron 2 of 23) 52892 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_92_630_0.109320525905041_9.35615645793507_0.73195487380609 chr5 134588341 134590957 + 0.73195487380609 NA intron (NM_020022, intron 4 of 10) intron (NM_020022, intron 4 of 10) 6959 NM_020022 19718 Mm.332739 NM_020022 ENSMUSG00000023104 Rfc2 2610008M13Rik|40kDa|AI326953|Recc2 replication factor C (activator 1) 2 protein-coding common_peak1_95_762_-0.108539156369723_9.52126966864967_0.731876147029724 chr12 59066933 59067639 + 0.731876147029724 NA intron (NM_008891, intron 1 of 8) CpG 367 NM_008891 18949 Mm.22347 NM_008891 ENSMUSG00000020994 Pnn AU045199|D12Ertd512e pinin protein-coding common_peak2_133_1131_-0.0875022314958027_10.100907127084_0.731829555964631 chr15 102399029 102400676 + 0.731829555964631 NA Intergenic Intergenic -6464 NM_013672 20683 Mm.4618 NM_013672 ENSMUSG00000001280 Sp1 1110003E12Rik|AA450830|AI845540|Sp1-1 trans-acting transcription factor 1 protein-coding common_peak1_17_111_-0.302669560184937_6.65602014196514_0.731729838108602 chr3 21962001 21962453 + 0.731729838108602 NA Intergenic Intergenic -114425 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak2_17_111_-0.302669560184937_6.65602014196514_0.731729838108602 chr11 114765385 114766030 + 0.731729838108602 NA intron (NM_001102615, intron 1 of 19) intron (NM_001102615, intron 1 of 19) 318 NM_001102615 286942 Mm.308713 NM_001102615 ENSMUSG00000010021 Kif19a Kif19 kinesin family member 19A protein-coding unique_peak2_17_111_-0.302669560184937_6.65602014196514_0.731729838108602-2 chr7 47021934 47022539 + 0.731729838108602 NA Intergenic Intergenic -13822 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding common_peak2_17_111_-0.302669560184937_6.65602014196514_0.731729838108602-2 chr2 153262569 153263302 + 0.731729838108602 NA intron (NM_080463, intron 6 of 6) MIR3|SINE|MIR 21403 NM_080463 140484 Mm.293761 NM_080463 ENSMUSG00000046020 Pofut1 O-FucT-1|mKIAA0180 protein O-fucosyltransferase 1 protein-coding common_peak2_17_111_-0.302669560184937_6.65602014196514_0.731729838108602 chr2 32981507 32982173 + 0.731729838108602 NA exon (NM_019488, exon 2 of 10) exon (NM_019488, exon 2 of 10) 216 NM_019488 56017 Mm.305754 NM_019488 ENSMUSG00000026791 Slc2a8 D2Ertd44e|GLUT8|GlutX1 solute carrier family 2, (facilitated glucose transporter), member 8 protein-coding common_peak1_17_111_-0.302669560184937_6.65602014196514_0.731729838108602-2 chr3 143646698 143647186 + 0.731729838108602 NA Intergenic Intergenic 65201 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA common_peak1_187_1695_-0.0715647447644674_10.692138082181_0.731626962686686 chr4 133095420 133097610 + 0.731626962686686 NA Intergenic RLTR4_MM-int|LTR|ERV1 -34118 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak1_37_258_-0.189831773103308_7.9218924011349_0.731588391949216 chr14 47373745 47374413 + 0.731588391949216 NA intron (NM_001145953, intron 1 of 5) CpG 219 NM_001145953 16854 Mm.248615 NM_010705 ENSMUSG00000050335 Lgals3 GBP|L-34|Mac-2|gal3 lectin, galactose binding, soluble 3 protein-coding common_peak2_31_212_-0.211844045914314_7.62878759726868_0.731296602747707 chr6 129755223 129756904 + 0.731296602747707 NA Intergenic L1_Mur2|LINE|L1 -15579 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak1_35_184_0.199916212542711_7.63133956678767_0.731296602747707-2 chr3 19308686 19309514 + 0.731296602747707 NA intron (NM_001122759, intron 1 of 12) intron (NM_001122759, intron 1 of 12) 2222 NM_001122759 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding common_peak1_35_184_0.199916212542711_7.63133956678767_0.731296602747707 chr2 19388491 19389114 + 0.731296602747707 NA intron (NM_029619, intron 3 of 4) intron (NM_029619, intron 3 of 4) 17166 NM_029619 76467 Mm.27166 NM_029619 ENSMUSG00000023094 Msrb2 2310050L06Rik|Mrsb|Msrb|Pilb methionine sulfoxide reductase B2 protein-coding common_peak2_31_212_-0.211844045914314_7.62878759726868_0.731296602747707-2 chr9 124143838 124145059 + 0.731296602747707 NA Intergenic RLTR12BD_Mm|LTR|ERVK 22905 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding unique_peak2_31_212_-0.211844045914314_7.62878759726868_0.731296602747707 chr13 92315551 92317183 + 0.731296602747707 NA intron (NM_001311120, intron 8 of 23) intron (NM_001311120, intron 8 of 23) -38416 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding common_peak2_35_184_0.199916212542711_7.63133956678767_0.731296602747707 chr17 80727363 80728566 + 0.731296602747707 NA promoter-TSS (NM_001290345) promoter-TSS (NM_001290345) 61 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_33_227_-0.202741442004214_7.73151929316263_0.731060136095618 chr14 121884078 121884649 + 0.731060136095618 NA intron (NM_026861, intron 1 of 8) LTR78|LTR|ERV1 -4955 NR_130999 78312 Mm.188743 NR_130999 ENSMUSG00000102112 1810041H14Rik - RIKEN cDNA 1810041H14 gene ncRNA unique_peak2_33_227_-0.202741442004214_7.73151929316263_0.731060136095618 chr9 78488407 78489623 + 0.731060136095618 NA Intergenic Intergenic -7291 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak1_70_534_-0.130235535441493_8.99827731356776_0.731005637076843-2 chr17 24478762 24479430 + 0.731005637076843 NA promoter-TSS (NM_001252464) promoter-TSS (NM_001252464) -18 NM_019988 56716 Mm.289516 NM_019988 ENSMUSG00000024142 Mlst8 0610033N12Rik|AA409454|AI505104|AI851821|Gbl MTOR associated protein, LST8 homolog (S. cerevisiae) protein-coding common_peak1_70_534_-0.130235535441493_8.99827731356776_0.731005637076843 chr16 4624083 4625110 + 0.731005637076843 NA intron (NM_025571, intron 1 of 4) CpG 350 NM_025571 66449 Mm.354760 NM_025571 ENSMUSG00000014301 Pam16 2010110I09Rik|AV006767|CGI-136|Magmas|Tim16|Timm16 presequence translocase-asssociated motor 16 homolog (S. cerevisiae) protein-coding common_peak1_140_1202_-0.0851553235967728_10.1898432653777_0.730923272947577 chr13 56702997 56704117 + 0.730923272947577 NA promoter-TSS (NM_001164042) promoter-TSS (NM_001164042) -111 NM_001164042 17129 Mm.272920 NM_008541 ENSMUSG00000021540 Smad5 1110051M15Rik|AI451355|Dwf-C|Madh5|MusMLP SMAD family member 5 protein-coding common_peak1_17_73_0.295231996243717_6.35706936375081_0.73089369474718-5 chr4 144997886 144998346 + 0.73089369474718 NA intron (NM_001276465, intron 67 of 69) intron (NM_001276465, intron 67 of 69) 104979 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_17_73_0.295231996243717_6.35706936375081_0.73089369474718-4 chr4 129580388 129580842 + 0.73089369474718 NA Intergenic MER5A|DNA|hAT-Charlie -2035 NM_182783 230766 Mm.20377 NM_182783 ENSMUSG00000050493 Fam167b SEC family with sequence similarity 167, member B protein-coding common_peak1_17_73_0.295231996243717_6.35706936375081_0.73089369474718-3 chr2 166045617 166046032 + 0.73089369474718 NA intron (NM_008679, intron 2 of 22) intron (NM_008679, intron 2 of 22) 53187 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding unique_peak2_14_91_-0.341517834645665_6.35280303873418_0.73089369474718 chr8 123160732 123161469 + 0.73089369474718 NA Intergenic Intergenic -2820 NM_020564 57429 Mm.6562 NM_020564 ENSMUSG00000000739 Sult5a1 Sult-x1|Sultx1 sulfotransferase family 5A, member 1 protein-coding common_peak2_17_73_0.295231996243717_6.35706936375081_0.73089369474718 chr10 88146803 88147471 + 0.73089369474718 NA promoter-TSS (NM_028334) promoter-TSS (NM_028334) 66 NM_028334 69736 Mm.222184 NM_027191 ENSMUSG00000035351 Nup37 2410003L22Rik|2810039M17Rik nucleoporin 37 protein-coding common_peak1_17_73_0.295231996243717_6.35706936375081_0.73089369474718-6 chr6 124722365 124722837 + 0.73089369474718 NA intron (NM_013545, intron 11 of 15) intron (NM_013545, intron 11 of 15) -4211 NR_029792 723944 NR_029792 ENSMUSG00000065462 Mir200c Mirn200c|mir-200c microRNA 200c ncRNA unique_peak2_17_73_0.295231996243717_6.35706936375081_0.73089369474718 chr14 69688857 69689479 + 0.73089369474718 NA intron (NM_033325, intron 11 of 13) intron (NM_033325, intron 11 of 13) -3080 NR_105915 102465573 NR_105915 ENSMUSG00000098666 Mir6950 Gm27586|mmu-mir-6950 microRNA 6950 ncRNA common_peak1_14_91_-0.341517834645665_6.35280303873418_0.73089369474718-2 chr18 80255799 80256163 + 0.73089369474718 NA promoter-TSS (NM_001164424) promoter-TSS (NM_001164424) -245 NM_001164424 66943 Mm.29247 NM_025861 ENSMUSG00000034006 Pqlc1 2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974 PQ loop repeat containing 1 protein-coding common_peak1_17_73_0.295231996243717_6.35706936375081_0.73089369474718-2 chr14 53903010 53903530 + 0.73089369474718 NA Intergenic Intergenic 350659 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_17_73_0.295231996243717_6.35706936375081_0.73089369474718 chr13 5865483 5865930 + 0.73089369474718 NA intron (NM_011803, intron 2 of 3) intron (NM_011803, intron 2 of 3) 4217 NM_011803 23849 Mm.275036 NM_011803 ENSMUSG00000000078 Klf6 AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9 Kruppel-like factor 6 protein-coding common_peak1_14_91_-0.341517834645665_6.35280303873418_0.73089369474718 chr17 29716640 29717027 + 0.73089369474718 NA intron (NM_026782, intron 1 of 3) CpG 184 NM_026782 68597 Mm.390979 NM_026782 ENSMUSG00000024018 Ccdc167 1110021J02Rik coiled-coil domain containing 167 protein-coding common_peak2_223_1913_0.0640265690909683_10.9343883990315_0.730700393522828 chr16 84834067 84836434 + 0.730700393522828 NA promoter-TSS (NM_001302216) promoter-TSS (NM_001302216) 126 NM_008065 14390 Mm.18974 NM_008065 ENSMUSG00000008976 Gabpa GABPalpha GA repeat binding protein, alpha protein-coding common_peak1_31_158_0.209982619027168_7.41787426479794_0.730659414100901-2 chr5 41844813 41845403 + 0.730659414100901 NA promoter-TSS (NM_001081422) promoter-TSS (NM_001081422) -793 NM_001310601 665775 Mm.158726 NM_001081422 ENSMUSG00000061755 Bod1l A230054D04Rik|AI853319|FAM44A|mKIAA1327 biorientation of chromosomes in cell division 1-like protein-coding common_peak1_31_158_0.209982619027168_7.41787426479794_0.730659414100901 chr12 85629781 85630448 + 0.730659414100901 NA intron (NM_001205052, intron 2 of 3) intron (NM_001205052, intron 2 of 3) 30096 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding unique_peak2_31_158_0.209982619027168_7.41787426479794_0.730659414100901 chr11 69414976 69416211 + 0.730659414100901 NA Intergenic Intergenic -1918 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak1_70_446_0.129028524663699_8.86864528351517_0.730598872747811 chr7 126369180 126370362 + 0.730598872747811 NA promoter-TSS (NM_010689) promoter-TSS (NM_010689) -237 NM_010689 16797 Mm.10280 NM_010689 ENSMUSG00000030742 Lat p36-38|pp36 linker for activation of T cells protein-coding common_peak2_70_446_0.129028524663699_8.86864528351517_0.730598872747811 chr6 119376457 119379187 + 0.730598872747811 NA intron (NM_197985, intron 1 of 7) intron (NM_197985, intron 1 of 7) 39661 NM_197985 68465 Mm.291826 NM_197985 ENSMUSG00000030168 Adipor2 1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2 adiponectin receptor 2 protein-coding common_peak1_33_171_0.203883817458429_7.52820666343131_0.730411831821332 chr11 3539020 3539737 + 0.730411831821332 NA promoter-TSS (NM_013870) promoter-TSS (NM_013870) -86 NM_001284428 29856 Mm.188516 NM_013870 ENSMUSG00000020439 Smtn smsmo smoothelin protein-coding common_peak1_33_171_0.203883817458429_7.52820666343131_0.730411831821332-2 chr2 119972236 119972999 + 0.730411831821332 NA promoter-TSS (NM_011941) promoter-TSS (NM_011941) -82 NM_011941 26390 Mm.330501 NM_011941 ENSMUSG00000033902 Mapkbp1 2810483F24Rik|AW123212|JNKBP-1|Jnkbp1|mKIAA0596 mitogen-activated protein kinase binding protein 1 protein-coding common_peak2_33_171_0.203883817458429_7.52820666343131_0.730411831821332 chr10 43540300 43541042 + 0.730411831821332 NA intron (NM_026411, intron 1 of 3) CpG 323 NM_026411 67851 Mm.209953 NM_026411 ENSMUSG00000019797 1700021F05Rik - RIKEN cDNA 1700021F05 gene protein-coding unique_peak2_33_171_0.203883817458429_7.52820666343131_0.730411831821332 chr1 183388466 183389567 + 0.730411831821332 NA promoter-TSS (NM_001277959) promoter-TSS (NM_001277959) 31 NM_001277958 21339 Mm.383556 NM_021466 ENSMUSG00000072258 Taf1a TAFI48|mTAFI48 TATA-box binding protein associated factor, RNA polymerase I, A protein-coding common_peak2_81_632_-0.118006113176559_9.24705863284006_0.730257936161063 chr5 124020969 124023383 + 0.730257936161063 NA intron (NM_177876, intron 1 of 3) intron (NM_177876, intron 1 of 3) 10084 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_81_632_-0.118006113176559_9.24705863284006_0.730257936161063 chr7 27355359 27356657 + 0.730257936161063 NA promoter-TSS (NM_138676) promoter-TSS (NM_138676) 0 NM_138676 192192 Mm.21297 NM_138676 ENSMUSG00000089832 Shkbp1 B930062H15Rik|Sb1 Sh3kbp1 binding protein 1 protein-coding common_peak1_48_346_-0.161915615667576_8.35783404474447_0.73024379172802 chr16 46001825 46002628 + 0.73024379172802 NA intron (NM_001134480, intron 1 of 3) URR1A|DNA|hAT-Charlie 8187 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding common_peak1_55_328_0.15123328746904_8.43756041746976_0.730201668865066 chr1 127321409 127322373 + 0.730201668865066 NA intron (NM_145128, intron 4 of 17) ID_B1|SINE|B4 116905 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_340_3466_-0.0494085033406755_11.7347678695325_0.729738085668179 chr13 46726485 46728735 + 0.729738085668179 NA 5' UTR (NM_175749, exon 1 of 22) 5' UTR (NM_175749, exon 1 of 22) 239 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak1_14_57_0.324063126283776_6.02001255826946_0.729729194218045-2 chr8 123162681 123163100 + 0.729729194218045 NA Intergenic ERVL-B4-int|LTR|ERVL -4610 NM_020564 57429 Mm.6562 NM_020564 ENSMUSG00000000739 Sult5a1 Sult-x1|Sultx1 sulfotransferase family 5A, member 1 protein-coding common_peak1_14_57_0.324063126283776_6.02001255826946_0.729729194218045 chr1 79711350 79711666 + 0.729729194218045 NA intron (NM_001111279, intron 8 of 11) intron (NM_001111279, intron 8 of 11) -39536 NM_183027 252903 Mm.32409 NM_183027 ENSMUSG00000054702 Ap1s3 1190009B22|Jr2|[s]3A adaptor-related protein complex AP-1, sigma 3 protein-coding common_peak2_158_1387_-0.078915570981863_10.3993340670873_0.729507806440912 chr9 21423925 21426337 + 0.729507806440912 NA exon (NM_001253894, exon 1 of 21) exon (NM_001253894, exon 1 of 21) 223 NM_001039520 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding common_peak1_184_1662_-0.0716832151975382_10.6637308456885_0.729477357189552 chr7 142378399 142381194 + 0.729477357189552 NA intron (NM_009983, intron 5 of 8) intron (NM_009983, intron 5 of 8) -7537 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_114_943_-0.096076658390011_9.83460472016684_0.729217728328087 chr14 21051578 21052703 + 0.729217728328087 NA promoter-TSS (NM_134079) promoter-TSS (NM_134079) 302 NM_018829 55946 Mm.376269 NM_018829 ENSMUSG00000021824 Ap3m1 1200013D09Rik|C78982|R75378 adaptor-related protein complex 3, mu 1 subunit protein-coding common_peak1_73_560_-0.125460998211027_9.06912646150328_0.728985441385081 chr7 64392317 64393267 + 0.728985441385081 NA promoter-TSS (NM_026483) promoter-TSS (NM_026483) 21 NM_028626 73724 Mm.10093 NM_028626 ENSMUSG00000033429 Mcee 1110007A04Rik methylmalonyl CoA epimerase protein-coding common_peak2_73_560_-0.125460998211027_9.06912646150328_0.728985441385081 chr1 59236538 59238358 + 0.728985441385081 NA promoter-TSS (NM_001159948) promoter-TSS (NM_001159948) -217 NM_146109 74018 Mm.272078 NM_028717 ENSMUSG00000026024 Als2 3222402C23Rik|9430073A21Rik|Als2cr6|Alsin|mKIAA1563 amyotrophic lateral sclerosis 2 (juvenile) protein-coding common_peak2_188_1545_0.0714190721802179_10.630034140015_0.728722117249893 chr7 30587736 30590295 + 0.728722117249893 NA promoter-TSS (NM_029274) promoter-TSS (NM_029274) -289 NM_029274 75410 Mm.168688 NM_029274 ENSMUSG00000006307 Kmt2b 2610014H22Rik|Mll2|Wbp7|mKIAA0304 lysine (K)-specific methyltransferase 2B protein-coding common_peak2_84_660_-0.116864613655201_9.31007415468009_0.728595689056473 chr7 114068364 114071026 + 0.728595689056473 NA intron (NM_025846, intron 1 of 5) RLTR20A4|LTR|ERVK 48086 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak1_22_146_-0.261211540742854_7.06906657446494_0.728581160200941-2 chr13 42048633 42049156 + 0.728581160200941 NA Intergenic Intergenic -3127 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak1_22_146_-0.261211540742854_7.06906657446494_0.728581160200941 chr12 100508279 100508732 + 0.728581160200941 NA intron (NM_001033213, intron 1 of 19) B2_Mm2|SINE|B2 12317 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding unique_peak2_22_146_-0.261211540742854_7.06906657446494_0.728581160200941 chr8 34097268 34098390 + 0.728581160200941 NA intron (NM_001293758, intron 2 of 6) intron (NM_001293758, intron 2 of 6) 9985 NM_001293758 22428 Mm.150373 NM_011722 ENSMUSG00000031516 Dctn6 AU044699|WS-3|p27 dynactin 6 protein-coding common_peak1_22_146_-0.261211540742854_7.06906657446494_0.728581160200941-3 chr7 126793950 126794351 + 0.728581160200941 NA Intergenic Intergenic -1679 NM_019674 56420 Mm.41998 NM_019674 ENSMUSG00000030697 Ppp4c 1110002D08Rik|AU016079|Ppx protein phosphatase 4, catalytic subunit protein-coding common_peak2_111_914_-0.097838560780767_9.78870865278102_0.728406901255496-2 chr9 56936657 56938543 + 0.728406901255496 NA promoter-TSS (NM_133976) promoter-TSS (NM_133976) 100 NM_133976 102462 Mm.12864 NM_133976 ENSMUSG00000032288 Imp3 1190002L16Rik|AI256594 IMP3, U3 small nucleolar ribonucleoprotein protein-coding common_peak2_111_914_-0.097838560780767_9.78870865278102_0.728406901255496 chr1 43560459 43563851 + 0.728406901255496 NA intron (NM_010879, intron 4 of 4) intron (NM_010879, intron 4 of 4) 116404 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_111_798_0.0977376794626608_9.69092053265931_0.727921265091547 chr5 64472240 64474366 + 0.727921265091547 NA Intergenic ORR1F|LTR|ERVL-MaLR -3705 NR_045411 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA unique_peak2_22_102_0.251960276910292_6.81248066563836_0.727258671764709-2 chr4 124695789 124696567 + 0.727258671764709 NA Intergenic Intergenic -2624 NM_026031 67205 Mm.259121 NM_026031 ENSMUSG00000028907 Utp11l 2700082D03Rik|CGI-94|Cgi94|Utp11 UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) protein-coding unique_peak2_22_102_0.251960276910292_6.81248066563836_0.727258671764709 chr12 108045986 108046951 + 0.727258671764709 NA Intergenic (TCTG)n|Simple_repeat|Simple_repeat -43054 NM_021399 58208 Mm.392694 NM_021399 ENSMUSG00000048251 Bcl11b 9130430L19Rik|AI604821|B630002E05Rik|BCL-11B|Ctip2|Rit1 B cell leukemia/lymphoma 11B protein-coding common_peak1_22_102_0.251960276910292_6.81248066563836_0.727258671764709-2 chr2 92205963 92206446 + 0.727258671764709 NA intron (NM_001109691, intron 2 of 18) intron (NM_001109691, intron 2 of 18) 14227 NR_035480 100316756 NR_035480 ENSMUSG00000088639 Mir1955 mir-1955|mmu-mir-1955 microRNA 1955 ncRNA common_peak1_22_102_0.251960276910292_6.81248066563836_0.727258671764709 chr13 48552104 48552647 + 0.727258671764709 NA Intergenic Intergenic -14103 NR_029725 387244 NR_029725 ENSMUSG00000065421 Mirlet7a-1 Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1 microRNA let7a-1 ncRNA common_peak1_10_65_-0.411208687850857_5.83878977543302_0.727096254943007 chr14 27352296 27352620 + 0.727096254943007 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) -8931 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_68_516_-0.131425150068139_8.94830789528086_0.726673854031077 chr7 92560763 92561956 + 0.726673854031077 NA 5' UTR (NM_025515, exon 1 of 9) 5' UTR (NM_025515, exon 1 of 9) 210 NM_001162918 66365 Mm.21173 NM_025515 ENSMUSG00000030613 Ccdc90b 2310015N07Rik|C86558 coiled-coil domain containing 90B protein-coding common_peak1_90_613_0.110250197349869_9.31721994404511_0.726584159613719 chr15 82353571 82354292 + 0.726584159613719 NA intron (NM_025987, intron 1 of 2) CpG 360 NM_025987 67130 Mm.27570 NM_025987 ENSMUSG00000022450 Ndufa6 14kDa|2700038D15Rik|B230217P19Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14) protein-coding common_peak1_53_313_0.154199129134323_8.37172031345879_0.726349776930176 chr10 93169682 93170623 + 0.726349776930176 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 7367 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak1_99_691_0.10461158687237_9.48693402107291_0.726190519715815 chr11 23497321 23498037 + 0.726190519715815 NA intron (NM_001290655, intron 1 of 8) CpG 360 NM_001290655 268390 Mm.13148 NM_172391 ENSMUSG00000020288 Ahsa2 - AHA1, activator of heat shock protein ATPase 2 protein-coding common_peak2_76_495_0.122525230386191_9.01545892557997_0.726017248714719 chr11 83604308 83606782 + 0.726017248714719 NA intron (NR_036453, intron 2 of 8) RMER15|LTR|ERVL -12458 NM_009139 20305 Mm.137 NM_009139 ENSMUSG00000018927 Ccl6 MRP-1|Scya6|c10 chemokine (C-C motif) ligand 6 protein-coding common_peak2_68_430_0.131051261157696_8.81706968966795_0.72584847625493 chr4 145253558 145254685 + 0.72584847625493 NA Intergenic Intergenic -7251 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding unique_peak2_46_262_0.164212098133715_8.12102503835916_0.725826908065932 chr8 128693816 128695742 + 0.725826908065932 NA intron (NM_010578, intron 1 of 15) MTC|LTR|ERVL-MaLR 9125 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_484_5304_-0.0396930855603976_12.3532904930219_0.725357002638291 chr9 57071467 57077998 + 0.725357002638291 NA intron (NM_001110351, intron 1 of 21) intron (NM_001110351, intron 1 of 21) -1644 NM_001110350 20466 Mm.15755 NM_011378 ENSMUSG00000042557 Sin3a AW553200|Sin3|mKIAA4126|mSin3A transcriptional regulator, SIN3A (yeast) protein-coding common_peak1_44_313_-0.168442111326996_8.21039969322813_0.725287414144322 chr17 78916344 78917099 + 0.725287414144322 NA intron (NM_001177403, intron 1 of 4) CpG 222 NM_001177402 68554 Mm.391820 NM_001177402 ENSMUSG00000062691 Cebpzos 1110001A16Rik CCAAT/enhancer binding protein (C/EBP), zeta, opposite strand protein-coding common_peak2_44_313_-0.168442111326996_8.21039969322813_0.725287414144322 chr2 78971817 78973562 + 0.725287414144322 NA Intergenic Intergenic 103642 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_79_614_-0.120083750223113_9.20440072511505_0.725136191172684 chr14 25841932 25842740 + 0.725136191172684 NA intron (NM_013469, intron 1 of 14) CpG 181 NM_013469 11744 Mm.294083 NM_013469 ENSMUSG00000021866 Anxa11 A830099O17Rik|Anx11 annexin A11 protein-coding common_peak1_58_430_-0.146017654047274_8.67853523206546_0.724900125037977-2 chr7 28981296 28981997 + 0.724900125037977 NA intron (NM_028659, intron 1 of 7) CpG 242 NM_001285943 73830 Mm.29714 NM_028659 ENSMUSG00000053565 Eif3k 1200009C21Rik|Eif3s12 eukaryotic translation initiation factor 3, subunit K protein-coding common_peak1_58_430_-0.146017654047274_8.67853523206546_0.724900125037977 chr13 24507781 24509102 + 0.724900125037977 NA Intergenic MTEa|LTR|ERVL-MaLR -73748 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_182_1640_-0.0717055563134572_10.644506745357_0.724445659357805 chr3 144203847 144206270 + 0.724445659357805 NA 5' UTR (NM_010723, exon 1 of 5) 5' UTR (NM_010723, exon 1 of 5) 197 NM_010723 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak2_247_2362_-0.059884775680473_11.1764615261336_0.724424128862241 chr17 34196050 34199428 + 0.724424128862241 NA promoter-TSS (NM_010724) promoter-TSS (NM_010724) -456 NM_010724 16913 Mm.180191 NM_010724 ENSMUSG00000024338 Psmb8 Lmp-7|Lmp7 proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) protein-coding common_peak2_71_542_-0.126898403558982_9.02135918602487_0.724380082904756 chr18 36793127 36794603 + 0.724380082904756 NA promoter-TSS (NM_025594) promoter-TSS (NM_025594) -58 NM_025594 66492 Mm.251155 NM_025594 ENSMUSG00000001383 Zmat2 2610510D14Rik|2900082I05Rik zinc finger, matrin type 2 protein-coding common_peak1_24_160_-0.244901685978233_7.2084660351255_0.724051002054098-2 chr7 101663562 101664219 + 0.724051002054098 NA exon (NM_009191, exon 1 of 16) exon (NM_009191, exon 1 of 16) 122 NM_009191 20480 Mm.3990 NM_009191 ENSMUSG00000001829 Clpb AL118244|Skd3 ClpB caseinolytic peptidase B protein-coding common_peak1_24_160_-0.244901685978233_7.2084660351255_0.724051002054098 chr2 80638791 80639380 + 0.724051002054098 NA promoter-TSS (NM_001190179) promoter-TSS (NM_001190179) -179 NM_001190179 69482 Mm.29200 NM_027091 ENSMUSG00000026999 Nup35 2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44 nucleoporin 35 protein-coding common_peak2_44_247_0.171982327177757_8.04018747397575_0.724026458522407 chr6 65572741 65573853 + 0.724026458522407 NA Intergenic Intergenic -17101 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding unique_peak2_19_124_-0.274650057031311_6.82845925614643_0.723492533298712-2 chr5 32863024 32863621 + 0.723492533298712 NA promoter-TSS (NM_001170567) promoter-TSS (NM_001170567) -399 NM_177786 277854 Mm.101524 NM_177786 ENSMUSG00000037426 Depdc5 AV016528 DEP domain containing 5 protein-coding common_peak1_19_124_-0.274650057031311_6.82845925614643_0.723492533298712 chr19 9116467 9116778 + 0.723492533298712 NA intron (NM_025610, intron 4 of 6) intron (NM_025610, intron 4 of 6) 18944 NM_025610 66514 Mm.272847 NM_025610 ENSMUSG00000024654 Asrgl1 2410004D18Rik|ALP|ALP1|AU040643|AW060375 asparaginase like 1 protein-coding unique_peak2_19_124_-0.274650057031311_6.82845925614643_0.723492533298712 chr19 6986925 6987930 + 0.723492533298712 NA TTS (NM_020566) TTS (NM_020566) 224 NM_001185164 22340 Mm.15607 NM_011697 ENSMUSG00000024962 Vegfb VEGF-B|Vrf vascular endothelial growth factor B protein-coding unique_peak2_19_124_-0.274650057031311_6.82845925614643_0.723492533298712-3 chr8 109750097 109750892 + 0.723492533298712 NA Intergenic Intergenic -12755 NM_001080930 52335 Mm.276770 NM_001080930 ENSMUSG00000069895 Atxn1l AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e|ENSMUSG00000069895 ataxin 1-like protein-coding common_peak1_190_1727_-0.0705159961766739_10.7196295040751_0.723455140406214 chr7 81788447 81790158 + 0.723455140406214 NA intron (NM_026077, intron 1 of 4) intron (NM_026077, intron 1 of 4) 151 NM_026077 67290 Mm.248391 NM_026077 ENSMUSG00000025102 3110040N11Rik AI851475 RIKEN cDNA 3110040N11 gene protein-coding common_peak1_109_894_-0.0978405425793465_9.75682360086195_0.723353824103231 chr10 80621270 80622518 + 0.723353824103231 NA promoter-TSS (NM_134002) promoter-TSS (NM_134002) -886 NM_134002 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding common_peak1_283_2780_-0.0550038611269592_11.4138860987832_0.723212859054009 chr8 81014158 81016214 + 0.723212859054009 NA promoter-TSS (NM_027554) promoter-TSS (NM_027554) -280 NM_027554 74841 Mm.246018 NM_027554 ENSMUSG00000038250 Usp38 4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891 ubiquitin specific peptidase 38 protein-coding common_peak2_198_1814_-0.0687720390356947_10.7913678133653_0.723050883100933 chr1 179802492 179804537 + 0.723050883100933 NA 5' UTR (NM_026375, exon 1 of 36) 5' UTR (NM_026375, exon 1 of 36) 501 NM_026375 226747 Mm.128165 NM_026375 ENSMUSG00000026491 Ahctf1 6230412P20Rik|AV011447|Elys AT hook containing transcription factor 1 protein-coding common_peak1_125_927_0.0902404760105657_9.90310123313285_0.723036043325268 chr11 69015418 69016801 + 0.723036043325268 NA 5' UTR (NM_001143790, exon 1 of 23) 5' UTR (NM_001143790, exon 1 of 23) 198 NM_001013256 68964 Mm.285785 NM_001013256 ENSMUSG00000020898 Ctc1 1500010J02Rik|AAF-132|AAF132 CTS telomere maintenance complex component 1 protein-coding common_peak1_330_3343_-0.0499668874188135_11.6823756883715_0.722890594575001 chr15 86184600 86186660 + 0.722890594575001 NA exon (NM_145475, exon 1 of 13) exon (NM_145475, exon 1 of 13) 511 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding common_peak1_202_1691_0.0676855706580888_10.758356638449_0.722575735752735 chr11 34761884 34764867 + 0.722575735752735 NA intron (NM_033374, intron 1 of 51) intron (NM_033374, intron 1 of 51) 20530 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding common_peak2_109_780_0.0987245914302921_9.65854103385713_0.722509021525004 chr2 90903892 90905407 + 0.722509021525004 NA promoter-TSS (NM_026688) promoter-TSS (NM_026688) 72 NM_026688 68349 Mm.30113 NM_026688 ENSMUSG00000005510 Ndufs3 0610010M09Rik|CI-30kD NADH dehydrogenase (ubiquinone) Fe-S protein 3 protein-coding common_peak1_56_412_-0.145499251869273_8.61724834548481_0.721943317158265 chr11 100770394 100771391 + 0.721943317158265 NA promoter-TSS (NM_031871) promoter-TSS (NM_031871) 65 NM_031871 80860 Mm.37308 NM_031871 ENSMUSG00000017747 Ghdc D11Lgp1e GH3 domain containing protein-coding common_peak2_227_2135_-0.0629725897646676_11.0292096368052_0.721850229460456 chr12 9029446 9032027 + 0.721850229460456 NA intron (NM_029321, intron 1 of 2) intron (NM_029321, intron 1 of 2) 739 NM_029321 75516 Mm.37581 NM_029321 ENSMUSG00000066637 Ttc32 1700013G20Rik tetratricopeptide repeat domain 32 protein-coding common_peak2_122_899_0.0917965900016728_9.85967948621787_0.72184054031676 chr17 22360787 22362306 + 0.72184054031676 NA promoter-TSS (NM_145484) promoter-TSS (NM_145484) 93 NM_145484 224598 Mm.390945 NM_145484 ENSMUSG00000044501 Zfp758 BC021442 zinc finger protein 758 protein-coding common_peak1_26_174_-0.229003544992734_7.33670933933596_0.721627076784838 chr12 83520475 83520907 + 0.721627076784838 NA intron (NM_030246, intron 1 of 13) CpG 225 NM_030246 73828 Mm.38238 NM_030246 ENSMUSG00000021222 Dcaf4 1110018E21Rik|Wdr21 DDB1 and CUL4 associated factor 4 protein-coding common_peak1_26_174_-0.229003544992734_7.33670933933596_0.721627076784838-2 chr19 9134519 9135024 + 0.721627076784838 NA intron (NM_025610, intron 2 of 6) intron (NM_025610, intron 2 of 6) 795 NM_025610 66514 Mm.272847 NM_025610 ENSMUSG00000024654 Asrgl1 2410004D18Rik|ALP|ALP1|AU040643|AW060375 asparaginase like 1 protein-coding common_peak1_365_3536_0.0469557746856939_11.8117883910438_0.721571571024358 chr9 31279472 31281983 + 0.721571571024358 NA Intergenic CpG 9326 NM_001101597 638580 Mm.373655 NM_001101597 Gm7244 EG638580 predicted gene 7244 protein-coding common_peak1_94_752_-0.108036264396716_9.50248792247357_0.721500228092034 chr2 181410968 181412647 + 0.721500228092034 NA exon (NM_027656, exon 2 of 4) exon (NM_027656, exon 2 of 4) 12581 NM_027656 72147 Mm.486504 NM_027656 ENSMUSG00000027583 Zbtb46 2610019F01Rik|4933406L05Rik|BZEL|Btbd4 zinc finger and BTB domain containing 46 protein-coding common_peak2_51_299_0.153214865331407_8.30542612316158_0.72147403404562 chr3 96813104 96814572 + 0.72147403404562 NA intron (NM_001163496, intron 1 of 4) intron (NM_001163496, intron 1 of 4) 683 NM_018767 54215 Mm.34693 NM_018767 ENSMUSG00000038304 Cd160 AU045688|By55 CD160 antigen protein-coding common_peak1_88_596_0.111431247499382_9.2773027450145_0.72126051966954 chr11 86201305 86202330 + 0.72126051966954 NA promoter-TSS (NM_178309) promoter-TSS (NM_178309) 457 NR_130958 74038 Mm.171304 NR_130958 ENSMUSG00000085208 Brip1os 4632419I22Rik BRCA1 interacting protein C-terminal helicase 1, opposite strand ncRNA common_peak1_42_233_0.175362450670546_7.95804594491868_0.721178932894168 chr8 106415118 106415904 + 0.721178932894168 NA 5' UTR (NM_011764, exon 1 of 4) 5' UTR (NM_011764, exon 1 of 4) 172 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding common_peak1_19_84_0.281743291493075_6.55026258188424_0.720952936333916-3 chr16 91408014 91408405 + 0.720952936333916 NA intron (NM_008349, intron 2 of 6) intron (NM_008349, intron 2 of 6) 1974 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding common_peak1_19_84_0.281743291493075_6.55026258188424_0.720952936333916-6 chr8 72303089 72303552 + 0.720952936333916 NA Intergenic Intergenic -15742 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_19_84_0.281743291493075_6.55026258188424_0.720952936333916 chr11 86598749 86599235 + 0.720952936333916 NA intron (NM_029478, intron 10 of 11) ID_B1|SINE|B4 -14834 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_19_84_0.281743291493075_6.55026258188424_0.720952936333916-5 chr7 101214130 101214665 + 0.720952936333916 NA intron (NM_199012, intron 8 of 20) Lx2|LINE|L1 87691 NM_001111111 73683 Mm.275744 NM_001111111 ENSMUSG00000047767 Atg16l2 2410118P20Rik autophagy related 16-like 2 (S. cerevisiae) protein-coding unique_peak2_19_84_0.281743291493075_6.55026258188424_0.720952936333916 chr7 24373218 24374260 + 0.720952936333916 NA intron (NM_008433, intron 1 of 8) intron (NM_008433, intron 1 of 8) 3476 NM_008433 16534 Mm.9911 NM_008433 ENSMUSG00000054342 Kcnn4 IK1|IKCA1|KCA4|KCa3.1|SK4|SKCas|mIKCa1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 protein-coding unique_peak2_19_84_0.281743291493075_6.55026258188424_0.720952936333916-2 chr8 106677948 106678742 + 0.720952936333916 NA Intergenic MMVL30-int|LTR|ERV1 -4723 NM_173037 272538 Mm.87151 NM_173037 ENSMUSG00000041949 Tango6 AW413431|E330010G16|Tmco7 transport and golgi organization 6 protein-coding common_peak1_19_84_0.281743291493075_6.55026258188424_0.720952936333916-2 chr15 97329535 97329965 + 0.720952936333916 NA intron (NM_172293, intron 3 of 5) B2_Mm2|SINE|B2 -82463 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_19_84_0.281743291493075_6.55026258188424_0.720952936333916-4 chr17 78200911 78201333 + 0.720952936333916 NA intron (NM_015800, intron 1 of 16) CpG 874 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding common_peak1_40_281_-0.178108087333368_8.05049730873211_0.720830129321552 chr7 63999253 64000313 + 0.720830129321552 NA Intergenic Intergenic -60868 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding common_peak1_236_2236_-0.0611159337925162_11.0967915741629_0.720680547761141 chr9 119339438 119342039 + 0.720680547761141 NA promoter-TSS (NM_010851) promoter-TSS (NM_010851) -556 NM_130864 113868 Mm.205266 NM_130864 ENSMUSG00000036138 Acaa1a Acaa|Acaa1|D9Ertd25e|PTL acetyl-Coenzyme A acyltransferase 1A protein-coding common_peak1_56_336_0.147893938368314_8.47055175036602_0.720507644260434 chr4 132509688 132510522 + 0.720507644260434 NA exon (NM_144907, exon 1 of 10) exon (NM_144907, exon 1 of 10) 351 NM_144907 230784 Mm.23608 NM_144907 ENSMUSG00000028893 Sesn2 HI95|SEST2|Ses2 sestrin 2 protein-coding common_peak2_119_872_0.0920432113409753_9.81585944929993_0.720344752159655 chr17 36950514 36952386 + 0.720344752159655 NA exon (NM_029632, exon 1 of 3) exon (NM_029632, exon 1 of 3) 342 NM_029632 76497 Mm.46176 NM_029632 ENSMUSG00000036398 Ppp1r11 1500041B02Rik|AV117883|Hcgv|Tcte5|Tctex-5|Tctex5 protein phosphatase 1, regulatory (inhibitor) subunit 11 protein-coding common_peak1_129_965_0.0876474526834787_9.95970310517751_0.720130806820601 chr1 66862696 66864199 + 0.720130806820601 NA promoter-TSS (NM_007381) promoter-TSS (NM_007381) -138 NM_007381 11363 Mm.2445 NM_007381 ENSMUSG00000026003 Acadl AA960361|AU018452|C79855|LCAD acyl-Coenzyme A dehydrogenase, long-chain protein-coding common_peak2_69_524_-0.128115586843595_8.97211581913169_0.71988630181934 chr3 95312048 95313922 + 0.71988630181934 NA Intergenic Intergenic -2267 NM_029789 76893 Mm.181009 NM_029789 ENSMUSG00000015714 Cers2 0610013I17Rik|AI225939|Lass2|TRH3 ceramide synthase 2 protein-coding unique_peak2_61_375_0.138705664243025_8.62394168379915_0.719807664259378 chr8 72210911 72212694 + 0.719807664259378 NA intron (NM_001080812, intron 1 of 4) intron (NM_001080812, intron 1 of 4) 1035 NM_001080812 234421 Mm.211247 NM_001080812 ENSMUSG00000074240 Cib3 C730014M21Rik|Gm1107|KIP3 calcium and integrin binding family member 3 protein-coding common_peak2_172_1383_0.0745823038558235_10.4719193795646_0.719773967834961 chr11 11517630 11523003 + 0.719773967834961 NA Intergenic Intergenic 31050 NM_028669 73862 Mm.159077 NM_028669 ENSMUSG00000020191 4930415F15Rik - RIKEN cDNA 4930415F15 gene protein-coding common_peak2_38_265_-0.182338985893328_7.96411294255453_0.719492793146525 chr10 111999868 112001173 + 0.719492793146525 NA Intergenic MER44B|DNA|TcMar-Tigger -3256 NM_028608 73690 Mm.173790 NM_028608 ENSMUSG00000056888 Glipr1 2410114O14Rik|RTVP-1|RTVP1|mRTVP-1 GLI pathogenesis-related 1 (glioma) protein-coding common_peak1_26_126_0.233522880067429_7.10544612680588_0.719230678178271 chr11 86577753 86578343 + 0.719230678178271 NA Intergenic Intergenic 6110 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_26_126_0.233522880067429_7.10544612680588_0.719230678178271-2 chr6 67347517 67348076 + 0.719230678178271 NA intron (NM_008354, intron 7 of 15) intron (NM_008354, intron 7 of 15) -8102 NM_001311141 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak2_126_937_0.0887665816586694_9.91782740334471_0.71867277032199 chrX 167178194 167181432 + 0.71867277032199 NA Intergenic ID_B1|SINE|B4 29405 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_28_189_-0.22119229381838_7.45925946142176_0.718431431671568-2 chr5 121848533 121849154 + 0.718431431671568 NA promoter-TSS (NM_175474) promoter-TSS (NM_175474) -185 NM_175474 231717 Mm.12654 NM_175474 ENSMUSG00000044134 Fam109a A230106M15Rik|AU017694|IPIP27A|Ses1 family with sequence similarity 109, member A protein-coding common_peak1_28_189_-0.22119229381838_7.45925946142176_0.718431431671568 chr4 141871745 141872355 + 0.718431431671568 NA intron (NM_025994, intron 1 of 3) intron (NM_025994, intron 1 of 3) 2870 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_28_189_-0.22119229381838_7.45925946142176_0.718431431671568-3 chr9 69450610 69451311 + 0.718431431671568 NA Intergenic Intergenic -2723 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding common_peak2_49_284_0.157809394270636_8.23372280618742_0.718232376578666-2 chr9 116160507 116161892 + 0.718232376578666 NA intron (NM_009371, intron 1 of 7) intron (NM_009371, intron 1 of 7) 14164 NM_029575 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak2_49_284_0.157809394270636_8.23372280618742_0.718232376578666 chr7 67222049 67223353 + 0.718232376578666 NA promoter-TSS (NM_001191051) promoter-TSS (NM_001191051) 85 NM_001191051 75099 Mm.121691 NM_175215 ENSMUSG00000043831 Lysmd4 4930506D23Rik LysM, putative peptidoglycan-binding, domain containing 4 protein-coding common_peak1_49_284_0.157809394270636_8.23372280618742_0.718232376578666 chr9 96477887 96478705 + 0.718232376578666 NA intron (NM_001311135, intron 1 of 2) CpG 379 NM_011279 19823 Mm.28235 NM_011279 ENSMUSG00000051234 Rnf7 Rbx2|SAG ring finger protein 7 protein-coding common_peak2_54_395_-0.148065601693695_8.55532381923276_0.718176534567462-2 chr9 65397849 65399552 + 0.718176534567462 NA intron (NM_001033158, intron 1 of 4) intron (NM_001033158, intron 1 of 4) 212 NM_001033158 70784 Mm.35827 NM_001033158 ENSMUSG00000041696 Rasl12 4631404I11Rik RAS-like, family 12 protein-coding common_peak2_54_395_-0.148065601693695_8.55532381923276_0.718176534567462 chr6 34868920 34870463 + 0.718176534567462 NA intron (NM_197986, intron 1 of 1) intron (NM_197986, intron 1 of 1) 6545 NM_197986 68487 Mm.248440 NM_197986 ENSMUSG00000057137 Tmem140 1110007F12Rik transmembrane protein 140 protein-coding common_peak1_237_2065_0.0610601425609385_11.0431546101455_0.717860804242403 chr19 3850951 3853025 + 0.717860804242403 NA non-coding (NR_073190, exon 1 of 13) non-coding (NR_073190, exon 1 of 13) 215 NR_073190 12660 Mm.225505 NM_013490 ENSMUSG00000024843 Chka CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha choline kinase alpha protein-coding common_peak1_47_337_-0.160491657003732_8.32063360778032_0.717522228430681 chr1 92911039 92911768 + 0.717522228430681 NA exon (NM_181405, exon 1 of 11) exon (NM_181405, exon 1 of 11) 578 NM_181405 108657 Mm.200971 NM_181405 ENSMUSG00000026269 Rnpepl1 1110014H17Rik|AI894167 arginyl aminopeptidase (aminopeptidase B)-like 1 protein-coding common_peak1_47_337_-0.160491657003732_8.32063360778032_0.717522228430681-2 chr5 73205821 73206730 + 0.717522228430681 NA intron (NM_028194, intron 2 of 62) intron (NM_028194, intron 2 of 62) 50343 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding unique_peak2_13_84_-0.349438497306132_6.23467168748464_0.717512109809957 chr10 82178142 82178726 + 0.717512109809957 NA Intergenic CpG 50421 NM_001163064 216177 Mm.482395 NM_001163064 ENSMUSG00000078435 AU041133 - expressed sequence AU041133 protein-coding unique_peak2_13_84_-0.349438497306132_6.23467168748464_0.717512109809957-2 chr12 76946035 76946821 + 0.717512109809957 NA intron (NM_008558, intron 3 of 4) intron (NM_008558, intron 3 of 4) 15820 NM_008558 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak1_13_84_-0.349438497306132_6.23467168748464_0.717512109809957-2 chr7 47113777 47114161 + 0.717512109809957 NA intron (NM_013643, intron 1 of 13) intron (NM_013643, intron 1 of 13) 18629 NM_001163565 19259 Mm.4654 NM_013643 ENSMUSG00000030854 Ptpn5 Step protein tyrosine phosphatase, non-receptor type 5 protein-coding common_peak1_13_84_-0.349438497306132_6.23467168748464_0.717512109809957 chr18 65380307 65380724 + 0.717512109809957 NA intron (NM_001037294, intron 1 of 12) intron (NM_001037294, intron 1 of 12) 13373 NM_001037294 225638 Mm.296528 NM_001037294 ENSMUSG00000032845 Alpk2 Gm549|Hak alpha-kinase 2 protein-coding unique_peak2_13_84_-0.349438497306132_6.23467168748464_0.717512109809957-3 chr2 45046923 45047782 + 0.717512109809957 NA intron (NM_001289521, intron 1 of 8) intron (NM_001289521, intron 1 of 8) -24175 NR_039591 100628598 NR_039591 ENSMUSG00000092679 Mir5129 mir-5129|mmu-mir-5129|mu-mir-5129 microRNA 5129 ncRNA common_peak1_343_3273_0.0487254973388644_11.7012013551436_0.717441800853033 chr15 60184655 60188110 + 0.717441800853033 NA Intergenic Intergenic -169764 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_38_205_0.186442922424642_7.77972198839554_0.717325856263513 chr1 105993672 105994081 + 0.717325856263513 NA intron (NM_001122675, intron 1 of 12) CpG 3470 NM_001122675 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding common_peak1_38_205_0.186442922424642_7.77972198839554_0.717325856263513-2 chr4 107066333 107066905 + 0.717325856263513 NA exon (NM_025500, exon 1 of 7) exon (NM_025500, exon 1 of 7) 247 NM_025500 56280 Mm.29517 NM_025500 ENSMUSG00000028622 Mrpl37 2300004O14Rik|AI132596|MRP-L2|Rpml2 mitochondrial ribosomal protein L37 protein-coding common_peak2_38_205_0.186442922424642_7.77972198839554_0.717325856263513 chr14 25542682 25544141 + 0.717325856263513 NA intron (NM_001310666, intron 3 of 23) B4A|SINE|B4 8972 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_72_551_-0.12620543039254_9.0454217415819_0.717166316814295 chr3 96593243 96594640 + 0.717166316814295 NA intron (NM_027241, intron 1 of 7) intron (NM_027241, intron 1 of 7) 240 NM_001293701 69870 Mm.292739 NM_027241 ENSMUSG00000028104 Polr3gl 2010003I19Rik polymerase (RNA) III (DNA directed) polypeptide G like protein-coding common_peak2_162_1428_-0.0769457571744461_10.4423173225086_0.716879935549764 chr7 110060400 110061533 + 0.716879935549764 NA promoter-TSS (NM_009281) promoter-TSS (NM_009281) -736 NM_009281 20841 Mm.10815 NM_009281 ENSMUSG00000061079 Zfp143 AA959806|AU015869|D7Ertd805e|KRAB14|SBF|Staf|Zfp79|Zfp80-rs1|Znf143|pHZ-1 zinc finger protein 143 protein-coding common_peak1_30_204_-0.21279789477114_7.57308115211988_0.716864912152941-2 chr4 133885934 133886587 + 0.716864912152941 NA intron (NM_009097, intron 1 of 21) intron (NM_009097, intron 1 of 21) 1537 NM_001285505 20111 Mm.301827 NM_009097 ENSMUSG00000003644 Rps6ka1 Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk ribosomal protein S6 kinase polypeptide 1 protein-coding common_peak1_30_204_-0.21279789477114_7.57308115211988_0.716864912152941 chr4 46507934 46508678 + 0.716864912152941 NA intron (NM_029077, intron 5 of 5) B3|SINE|B2 18977 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding unique_peak2_30_204_-0.21279789477114_7.57308115211988_0.716864912152941 chr17 5330059 5331291 + 0.716864912152941 NA intron (NM_001085355, intron 15 of 19) intron (NM_001085355, intron 15 of 19) 88092 NM_175349 106557 Mm.432764 NM_175349 ENSMUSG00000101959 Ldhal6b 4933402O15Rik|AI326310|LDHL|Ldhal lactate dehydrogenase A-like 6B protein-coding common_peak2_264_2557_-0.0569531965602028_11.2923239506015_0.716822419576452 chr11 72606526 72609007 + 0.716822419576452 NA intron (NM_025985, intron 1 of 5) CpG 505 NM_025985 67128 Mm.458052 NM_025985 ENSMUSG00000020794 Ube2g1 2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik ubiquitin-conjugating enzyme E2G 1 protein-coding common_peak2_89_705_-0.110733424520193_9.40815766101109_0.71672728656212 chr11 75347514 75349327 + 0.71672728656212 NA promoter-TSS (NM_001102611) promoter-TSS (NM_001102611) -13 NM_001102611 319822 Mm.340377 NM_177009 ENSMUSG00000018809 Smyd4 G430029E23Rik SET and MYND domain containing 4 protein-coding common_peak1_32_219_-0.20403976586378_7.67933983059277_0.716581257106504 chr18 23733841 23734671 + 0.716581257106504 NA Intergenic Intergenic 18049 NR_126066 100502834 Mm.213614 NR_126066 ENSMUSG00000086287 Gm15972 OTTMUSG00000028454 predicted gene 15972 ncRNA unique_peak2_32_219_-0.20403976586378_7.67933983059277_0.716581257106504 chr14 75195406 75197122 + 0.716581257106504 NA intron (NM_008879, intron 2 of 16) intron (NM_008879, intron 2 of 16) -46023 NM_019775 56373 Mm.24242 NM_019775 ENSMUSG00000021999 Cpb2 1110032P04Rik|4930405E17Rik|AI255929|CPR|Cpu|TAFI carboxypeptidase B2 (plasma) protein-coding common_peak1_16_104_-0.31070925669195_6.55889088932015_0.716494160201252-3 chr7 22774849 22775275 + 0.716494160201252 NA intron (NM_001270494, intron 1 of 1).3 MMVL30-int|LTR|ERV1 13365 NM_001166754 667551 Mm.484969 NM_001166754 ENSMUSG00000095619 Vmn1r157 100043559|EG667551|Gm4517|Gm8699|Vmn1r109 vomeronasal 1 receptor 157 protein-coding common_peak1_16_104_-0.31070925669195_6.55889088932015_0.716494160201252 chr1 131090474 131090967 + 0.716494160201252 NA intron (NM_008551, intron 1 of 9) intron (NM_008551, intron 1 of 9) 7123 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding unique_peak2_16_104_-0.31070925669195_6.55889088932015_0.716494160201252 chr15 59263228 59264109 + 0.716494160201252 NA Intergenic Intergenic -43280 NR_045613 100416830 Mm.490788 NR_045613 ENSMUSG00000098528 Zfp572 4930472F24Rik zinc finger protein 572 pseudo unique_peak2_16_104_-0.31070925669195_6.55889088932015_0.716494160201252-2 chr4 35140214 35141177 + 0.716494160201252 NA intron (NM_178061, intron 1 of 3) intron (NM_178061, intron 1 of 3) -11360 NM_199157 387510 Mm.386929 NM_199157 ENSMUSG00000042993 Ifnk - interferon kappa protein-coding common_peak1_16_104_-0.31070925669195_6.55889088932015_0.716494160201252-2 chr13 24606364 24606832 + 0.716494160201252 NA intron (NM_001286100, intron 1 of 22) intron (NM_001286100, intron 1 of 22) -1831 NR_024599 76024 Mm.440710 NR_024599 Gm11346 5830431A10Rik|AI447617|Gm11347|OTTMUSG00000000601|OTTMUSG00000000602 X-linked lymphocyte-regulated 5 pseudogene pseudo common_peak2_16_104_-0.31070925669195_6.55889088932015_0.716494160201252 chr17 36167780 36168364 + 0.716494160201252 NA exon (NM_001081032, exon 2 of 8) exon (NM_001081032, exon 2 of 8) 465 NM_001081032 667977 Mm.441651 NM_001081032 ENSMUSG00000073402 Gm8909 EG667977|H2-Tw5l|H2-gs17 predicted gene 8909 protein-coding common_peak1_130_974_0.087828853209901_9.97317283524192_0.716376468800743 chr8 27042038 27043439 + 0.716376468800743 NA intron (NM_054057, intron 1 of 7) CpG 183 NM_054057 114863 Mm.277501 NM_054057 ENSMUSG00000031485 Prosc 1700024N20Rik|2200002F22Rik proline synthetase co-transcribed protein-coding common_peak2_130_974_0.087828853209901_9.97317283524192_0.716376468800743 chr13 100743740 100745306 + 0.716376468800743 NA intron (NM_001190264, intron 1 of 3) CpG 136 NM_001190264 66128 Mm.306173 NM_025369 ENSMUSG00000061474 Mrps36 1110018B13Rik|S36mt mitochondrial ribosomal protein S36 protein-coding common_peak1_54_321_0.150374140271298_8.40610394825027_0.716303167991346 chr1 58719957 58720872 + 0.716303167991346 NA intron (NM_207653, intron 1 of 9) intron (NM_207653, intron 1 of 9) 7128 NM_207653 12633 Mm.336848 NM_009805 ENSMUSG00000026031 Cflar 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip CASP8 and FADD-like apoptosis regulator protein-coding common_peak2_54_321_0.150374140271298_8.40610394825027_0.716303167991346 chrX 59567059 59568702 + 0.716303167991346 NA intron (NM_001290414, intron 1 of 6) CpG 17692 NM_001290414 14168 Mm.7995 NM_010200 ENSMUSG00000031137 Fgf13 Fhf2 fibroblast growth factor 13 protein-coding common_peak2_282_2565_0.0548366343530819_11.3527237722662_0.716250787443242 chr13 95709948 95717426 + 0.716250787443242 NA intron (NM_027711, intron 12 of 35) intron (NM_027711, intron 12 of 35) 16767 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak2_395_4150_-0.044564130416731_11.9969611513952_0.716082945303394 chr9 44231583 44238706 + 0.716082945303394 NA Intergenic Intergenic -1098 NM_007619 12402 Mm.266871 NM_007619 ENSMUSG00000034342 Cbl 4732447J05Rik|Cbl-2|c-Cbl|cbl Casitas B-lineage lymphoma protein-coding common_peak2_104_736_0.100059421581749_9.57555051988594_0.716058548364216 chr9 70206810 70209000 + 0.716058548364216 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 555 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_166_1470_-0.0758349255668698_10.4846640684714_0.715974325543298 chr5 111177620 111179544 + 0.715974325543298 NA intron (NM_001267622, intron 5 of 22) intron (NM_001267622, intron 5 of 22) -152115 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak2_64_399_0.133058330558171_8.71038535505381_0.715788515212472 chr9 56097239 56098969 + 0.715788515212472 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 8128 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak1_101_709_0.102607873921768_9.52297915135293_0.71578094075363 chr16 31663281 31664712 + 0.71578094075363 NA promoter-TSS (NM_001252433) promoter-TSS (NM_001252433) 61 NM_001252434 13383 Mm.382 NM_007862 ENSMUSG00000022770 Dlg1 B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187 discs, large homolog 1 (Drosophila) protein-coding common_peak2_247_2361_-0.0592741111037824_11.1761561938453_0.715646453753988 chr13 51845111 51850108 + 0.715646453753988 NA exon (NM_011817, exon 3 of 4) exon (NM_011817, exon 3 of 4) 934 NM_011817 23882 Mm.281298 NM_011817 ENSMUSG00000021453 Gadd45g AI327420|C86281|CR6|DDIT2|OIG37 growth arrest and DNA-damage-inducible 45 gamma protein-coding common_peak2_28_139_0.219380297567602_7.23897316572877_0.715628666291172 chr4 138304724 138305384 + 0.715628666291172 NA intron (NM_007838, intron 1 of 10) CpG 316 NM_007838 13200 Mm.7236 NM_007838 ENSMUSG00000028757 Ddost - dolichyl-di-phosphooligosaccharide-protein glycotransferase protein-coding common_peak1_28_139_0.219380297567602_7.23897316572877_0.715628666291172 chr5 125475839 125476337 + 0.715628666291172 NA exon (NM_030210, exon 1 of 18) exon (NM_030210, exon 1 of 18) 215 NM_030210 78894 Mm.431573 NM_030210 ENSMUSG00000029482 Aacs 2210408B16Rik|SUR5 acetoacetyl-CoA synthetase protein-coding common_peak1_28_139_0.219380297567602_7.23897316572877_0.715628666291172-3 chr8 13659984 13660641 + 0.715628666291172 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 17275 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding unique_peak2_28_139_0.219380297567602_7.23897316572877_0.715628666291172 chr9 120046679 120047748 + 0.715628666291172 NA Intergenic RSINE1|SINE|B4 21083 NM_009987 13051 Mm.44065 NM_009987 ENSMUSG00000052336 Cx3cr1 - chemokine (C-X3-C motif) receptor 1 protein-coding common_peak1_28_139_0.219380297567602_7.23897316572877_0.715628666291172-2 chr7 43433228 43433829 + 0.715628666291172 NA intron (NM_177693, intron 2 of 4) L2c|LINE|L2 3427 NM_177693 233187 Mm.267027 NM_177693 ENSMUSG00000004613 Lim2 19kDa|4833403J20|MP19|To3 lens intrinsic membrane protein 2 protein-coding common_peak2_47_269_0.16357218222762_8.15860168816464_0.715399805125213 chr6 117840545 117841820 + 0.715399805125213 NA promoter-TSS (NM_177684) promoter-TSS (NM_177684) -60 NM_177684 232337 Mm.290847 NM_177684 ENSMUSG00000059689 Zfp637 AI646709|BC021601|Znf32 zinc finger protein 637 protein-coding common_peak1_21_138_-0.259143330029556_6.98936940770873_0.71532554654411 chr4 152194432 152194902 + 0.71532554654411 NA intron (NM_001146057, intron 1 of 8) intron (NM_001146057, intron 1 of 8) -5177 NM_001146058 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding unique_peak2_21_138_-0.259143330029556_6.98936940770873_0.71532554654411 chr11 97810152 97811390 + 0.71532554654411 NA intron (NM_010688, intron 2 of 6) intron (NM_010688, intron 2 of 6) 11099 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak1_114_942_-0.0945475697032663_9.83384017582346_0.715288226012375 chr19 46598861 46600156 + 0.715288226012375 NA intron (NM_146099, intron 1 of 3) intron (NM_146099, intron 1 of 3) 402 NM_146099 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_345_3526_-0.0484030177473453_11.7600243515526_0.715027950684834 chr15 97468303 97470883 + 0.715027950684834 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -222306 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak2_59_360_0.13941371689689_8.56556188533562_0.714871801415975 chr19 7568653 7570470 + 0.714871801415975 NA intron (NM_139269, intron 2 of 4) B3A|SINE|B2 12102 NM_139269 225845 Mm.274810 NM_139269 ENSMUSG00000060675 Pla2g16 C78643|HRSL3|Hrasls3|Hrev107|MLP-3 phospholipase A2, group XVI protein-coding common_peak2_59_360_0.13941371689689_8.56556188533562_0.714871801415975-2 chr6 140205990 140207792 + 0.714871801415975 NA Intergenic RLTR44A|LTR|ERVK 165366 NM_007605 12344 Mm.12817 NM_007605 ENSMUSG00000041791 Capza3 510-4|Cappa3|Gsg3|Tex8|repro32 capping protein (actin filament) muscle Z-line, alpha 3 protein-coding common_peak1_34_178_0.197629937259277_7.5826307458939_0.714689832398991 chr16 35363346 35363862 + 0.714689832398991 NA intron (NM_133704, intron 1 of 6) CpG 314 NM_133704 317717 Mm.259164 NM_133704 ENSMUSG00000034473 Sec22a 1810005C06Rik|Sec22l2 SEC22 homolog A, vesicle trafficking protein protein-coding common_peak2_52_378_-0.15031227272798_8.4908979018071_0.714668267686879 chr17 56039697 56040976 + 0.714668267686879 NA promoter-TSS (NM_013733) promoter-TSS (NM_013733) -80 NM_013733 27221 Mm.391010 NM_013733 ENSMUSG00000002835 Chaf1a AL023013|AL024058|CAF-1|Cac1p chromatin assembly factor 1, subunit A (p150) protein-coding common_peak1_67_507_-0.131923803425282_8.92272278505952_0.714661904182787 chr17 24162701 24163933 + 0.714661904182787 NA TTS (NR_037854) TTS (NR_037854) 416 NM_172935 245847 Mm.87319 NM_172935 ENSMUSG00000036820 Amdhd2 5730457F11Rik amidohydrolase domain containing 2 protein-coding common_peak2_36_192_0.18732661394333_7.68612034423974_0.714560895539555 chr11 76945218 76946208 + 0.714560895539555 NA promoter-TSS (NM_178645) promoter-TSS (NM_178645) 57 NM_178645 104184 Mm.399785 NM_178645 ENSMUSG00000020840 Blmh AI035728|Bh|Bmh bleomycin hydrolase protein-coding common_peak1_78_604_-0.11869224104864_9.18144521163764_0.714302483993019 chr7 127283870 127284826 + 0.714302483993019 NA Intergenic RLTR9D|LTR|ERVK -10289 NM_009266 20768 Mm.20294 NM_009266 ENSMUSG00000049091 Sephs2 Sps2|Ysg3 selenophosphate synthetase 2 protein-coding common_peak2_111_913_-0.0962609826674328_9.78791986372435_0.714273433953275 chr12 54718504 54719976 + 0.714273433953275 NA Intergenic U1|snRNA|snRNA -23375 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak2_45_321_-0.165843762834752_8.24799499669724_0.7141109261615 chr7 30121239 30122668 + 0.7141109261615 NA promoter-TSS (NM_001081007) promoter-TSS (NM_001081007) 5 NM_001081007 233060 Mm.443484 NM_001081007 ENSMUSG00000074220 Zfp382 5930415A09Rik|Znf382 zinc finger protein 382 protein-coding unique_peak2_45_321_-0.165843762834752_8.24799499669724_0.7141109261615 chr15 100419396 100421089 + 0.7141109261615 NA intron (NM_008732, intron 1 of 16) B3A|SINE|B2 2813 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding common_peak2_30_152_0.209294362041654_7.36203502371348_0.713941657217421-3 chrX 35903716 35904891 + 0.713941657217421 NA intron (NM_001009947, intron 1 of 52) intron (NM_001009947, intron 1 of 52) 15471 NM_001009947 75974 Mm.32873 NM_177745 ENSMUSG00000031093 Dock11 5033414A21Rik|8030476J24|Zizimin2|sph238 dedicator of cytokinesis 11 protein-coding common_peak2_30_152_0.209294362041654_7.36203502371348_0.713941657217421 chr1 133363572 133364342 + 0.713941657217421 NA exon (NM_175443, exon 1 of 8) exon (NM_175443, exon 1 of 8) 385 NM_175443 214253 Mm.52111 NM_175443 ENSMUSG00000070644 Etnk2 4933417N20Rik|AI197444|EKI 2|Eki2|Tuc1 ethanolamine kinase 2 protein-coding common_peak1_30_152_0.209294362041654_7.36203502371348_0.713941657217421 chr18 80256188 80256870 + 0.713941657217421 NA intron (NM_025861, intron 1 of 5) CpG 223 NM_001164423 66943 Mm.29247 NM_025861 ENSMUSG00000034006 Pqlc1 2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974 PQ loop repeat containing 1 protein-coding unique_peak2_30_152_0.209294362041654_7.36203502371348_0.713941657217421 chr1 54857972 54859045 + 0.713941657217421 NA intron (NM_001081433, intron 1 of 27) ORR1F|LTR|ERVL-MaLR 67879 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_30_152_0.209294362041654_7.36203502371348_0.713941657217421-2 chr19 55098530 55099491 + 0.713941657217421 NA intron (NM_008149, intron 1 of 20) intron (NM_008149, intron 1 of 20) 437 NM_008149 14732 Mm.210196 NM_008149 ENSMUSG00000024978 Gpam GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding common_peak2_141_1079_0.0829562599825415_10.1182937270421_0.713795568512736 chr7 99979382 99981280 + 0.713795568512736 NA exon (NM_175388, exon 1 of 6) exon (NM_175388, exon 1 of 6) 127 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding common_peak2_32_165_0.202280516313955_7.4761796895039_0.713733113308254-2 chr3 106452369 106453438 + 0.713733113308254 NA Intergenic Intergenic -29528 NM_001093754 72121 Mm.14816 NM_028110 ENSMUSG00000027901 Dennd2d 2010308M01Rik|AI451421 DENN/MADD domain containing 2D protein-coding unique_peak2_32_165_0.202280516313955_7.4761796895039_0.713733113308254 chr6 70102872 70104142 + 0.713733113308254 NA Intergenic LTRIS2|LTR|ERV1 688668 NM_009075 19895 Mm.17905 NM_009075 ENSMUSG00000053604 Rpia RPI ribose 5-phosphate isomerase A protein-coding common_peak2_32_165_0.202280516313955_7.4761796895039_0.713733113308254 chr15 75929139 75930290 + 0.713733113308254 NA promoter-TSS (NM_031201) promoter-TSS (NM_031201) 16 NM_031201 22122 Mm.22596 NM_031201 ENSMUSG00000022570 Tsta3 AI256181|FX|Tstap35b tissue specific transplantation antigen P35B protein-coding common_peak2_57_420_-0.14240079736747_8.64647602438266_0.713528838567518 chr10 51453005 51455309 + 0.713528838567518 NA Intergenic Intergenic -26455 NM_008147 14727 Mm.439661 NM_008147 ENSMUSG00000062593 Lilr4b Gp49a|gp49 leukocyte immunoglobulin-like receptor, subfamily B, member 4B protein-coding common_peak1_138_1180_-0.0838084686045555_10.1638890150949_0.713420544592975 chr2 112492140 112493633 + 0.713420544592975 NA promoter-TSS (NM_028844) promoter-TSS (NM_028844) -78 NM_028844 74268 Mm.315125 NM_028844 ENSMUSG00000003604 Aven 1700013A01Rik|1700056A21Rik|mAven-L|mAven-S apoptosis, caspase activation inhibitor protein-coding common_peak2_81_631_-0.11572517192532_9.24591816221444_0.713252137854399 chr15 42674331 42676980 + 0.713252137854399 NA intron (NM_009640, intron 1 of 8) intron (NM_009640, intron 1 of 8) 1322 NM_001286062 11600 Mm.309336 NM_009640 ENSMUSG00000022309 Angpt1 1110046O21Rik|Ang-1|Ang1 angiopoietin 1 protein-coding common_peak1_81_631_-0.11572517192532_9.24591816221444_0.713252137854399 chr13 67359838 67360858 + 0.713252137854399 NA intron (NM_001038651, intron 1 of 3) intron (NM_001038651, intron 1 of 3) 224 NM_001038651 629016 Mm.440800 NM_001038651 ENSMUSG00000098905 Zfp953 E130120F12Rik zinc finger protein 953 protein-coding common_peak2_67_423_0.128840428783684_8.79234066895504_0.712703735981559 chr10 94147427 94148912 + 0.712703735981559 NA intron (NM_011629, intron 1 of 13) CpG 238 NM_011629 22025 Mm.107483 NM_011629 ENSMUSG00000005897 Nr2c1 4831444H07Rik|80.3|Eenr|TR2|Tr2-11 nuclear receptor subfamily 2, group C, member 1 protein-coding common_peak2_67_423_0.128840428783684_8.79234066895504_0.712703735981559-2 chr7 125510763 125512342 + 0.712703735981559 NA Intergenic Intergenic -20010 NM_026330 67711 Mm.4467 NM_026330 ENSMUSG00000030750 Nsmce1 2510027N19Rik NSE1 homolog, SMC5-SMC6 complex component protein-coding common_peak1_13_52_0.332031984268371_5.89393644669738_0.712696723931493-2 chr5 62908481 62908855 + 0.712696723931493 NA Intergenic Intergenic 94845 NM_001170705 100322896 Mm.479821 NM_001170705 ENSMUSG00000090326 Dthd1 Gm17384 death domain containing 1 protein-coding common_peak1_13_52_0.332031984268371_5.89393644669738_0.712696723931493 chr17 26533011 26533333 + 0.712696723931493 NA Intergenic Intergenic -24700 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding unique_peak2_16_68_0.295011804196003_6.25603035887617_0.712045166899466 chr1 64303111 64303641 + 0.712045166899466 NA Intergenic Intergenic -181987 NM_033563 93691 Mm.29466 NM_033563 ENSMUSG00000025959 Klf7 9830124P08Rik Kruppel-like factor 7 (ubiquitous) protein-coding unique_peak2_16_68_0.295011804196003_6.25603035887617_0.712045166899466-2 chrX 163995750 163996283 + 0.712045166899466 NA intron (NM_181315, intron 3 of 7) PB1D10|SINE|Alu 31994 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak2_16_68_0.295011804196003_6.25603035887617_0.712045166899466 chr8 22185405 22185980 + 0.712045166899466 NA exon (NM_001004140, exon 1 of 9) exon (NM_001004140, exon 1 of 9) 127 NM_001004140 80986 Mm.22448 NM_001004140 ENSMUSG00000037725 Ckap2 AI461656|AW228814|LB1 cytoskeleton associated protein 2 protein-coding common_peak1_16_68_0.295011804196003_6.25603035887617_0.712045166899466 chr15 73176694 73177103 + 0.712045166899466 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 8049 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak2_84_659_-0.114680366393324_9.30898203104915_0.711983629096629 chr1 43137704 43139955 + 0.711983629096629 NA intron (NM_001289533, intron 3 of 5) intron (NM_001289533, intron 3 of 5) 25132 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_160_1406_-0.076409699877555_10.4202017632978_0.711913528967375 chr5 23711169 23714483 + 0.711913528967375 NA promoter-TSS (NR_038090) promoter-TSS (NR_038090) -159 NR_015554 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak1_108_772_0.0974176316047881_9.64303341972724_0.711911791285052 chr4 3574132 3575475 + 0.711911791285052 NA promoter-TSS (NM_054089) promoter-TSS (NM_054089) -35 NM_028097 72098 Mm.441135 NM_028097 ENSMUSG00000028232 Tmem68 2010300G19Rik|AA408325|AW123402 transmembrane protein 68 protein-coding common_peak2_108_772_0.0974176316047881_9.64303341972724_0.711911791285052 chr6 35132725 35134644 + 0.711911791285052 NA promoter-TSS (NM_016877) promoter-TSS (NM_016877) 53 NM_001164412 53621 Mm.214525 NM_016877 ENSMUSG00000038784 Cnot4 Not4|Not4h|Not4hp CCR4-NOT transcription complex, subunit 4 protein-coding common_peak1_289_2646_0.0532387330818445_11.3967618460363_0.7117936727603 chr19 40659642 40662032 + 0.7117936727603 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 1067 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak2_45_255_0.165073115279865_8.08253655763993_0.71152471505037-2 chr5 74522932 74524211 + 0.71152471505037 NA intron (NM_001286437, intron 1 of 7) intron (NM_001286437, intron 1 of 7) 8171 NM_178672 212986 Mm.134147 NM_178672 ENSMUSG00000062110 Scfd2 E430013M20Rik|STXBP1L1 Sec1 family domain containing 2 protein-coding common_peak2_45_255_0.165073115279865_8.08253655763993_0.71152471505037 chr1 175691832 175692960 + 0.71152471505037 NA exon (NM_010098, exon 1 of 4) exon (NM_010098, exon 1 of 4) 236 NM_010098 13603 Mm.32744 NM_010098 ENSMUSG00000026525 Opn3 ERO|Ecpn opsin 3 protein-coding unique_peak2_62_383_0.136646659230626_8.65328583033647_0.71147754484354 chr17 56020909 56024027 + 0.71147754484354 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 13267 NM_026530 68047 Mm.358710 NM_026530 ENSMUSG00000003199 Mpnd E130307M08Rik MPN domain containing protein-coding common_peak1_21_96_0.259884900506823_6.72985529244054_0.711351681653809 chrX 20279039 20279480 + 0.711351681653809 NA intron (NM_177353, intron 1 of 16) intron (NM_177353, intron 1 of 16) 12505 NM_177353 236727 Mm.132983 NM_177353 ENSMUSG00000037341 Slc9a7 A530087D17Rik|NHE7 solute carrier family 9 (sodium/hydrogen exchanger), member 7 protein-coding common_peak2_21_96_0.259884900506823_6.72985529244054_0.711351681653809 chrX 100626048 100626668 + 0.711351681653809 NA promoter-TSS (NM_028303) promoter-TSS (NM_028303) 293 NM_008446 16571 Mm.383091 NM_008446 ENSMUSG00000034311 Kif4 AI323435|D330050K22Rik|Kns4 kinesin family member 4 protein-coding common_peak2_267_2591_-0.0560816803621886_11.3118091627035_0.711260379585636 chr6 54806066 54812185 + 0.711260379585636 NA Intergenic Intergenic -7791 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_57_344_0.144823074033393_8.50286408868223_0.711242065097203 chr19 3935231 3936518 + 0.711242065097203 NA exon (NM_001161428, exon 2 of 10) exon (NM_001161428, exon 2 of 10) 688 NM_001161428 54445 Mm.262094 NM_019449 ENSMUSG00000036908 Unc93b1 Unc-93B1|Unc93b unc-93 homolog B1 (C. elegans) protein-coding common_peak1_57_344_0.144823074033393_8.50286408868223_0.711242065097203-2 chr5 150601036 150601734 + 0.711242065097203 NA Intergenic Intergenic -6860 NM_133898 100637 Mm.279932 NM_133898 ENSMUSG00000041132 N4bp2l1 2410024N18Rik|AI428195|B230342M21Rik NEDD4 binding protein 2-like 1 protein-coding common_peak1_211_1955_-0.064724267136409_10.901328521384_0.711230771622421 chr8 13648085 13650575 + 0.711230771622421 NA intron (NM_009025, intron 1 of 23) L1M4|LINE|L1 28257 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_105_745_0.0993222563742311_9.59269294844235_0.711218146644514 chr7 127195124 127196807 + 0.711218146644514 NA 5' UTR (NM_027353, exon 1 of 7) 5' UTR (NM_027353, exon 1 of 7) 112 NM_001285907 70233 Mm.28050 NM_027353 ENSMUSG00000042502 Cd2bp2 1500011B02Rik|2410024K20Rik|AW048183 CD2 antigen (cytoplasmic tail) binding protein 2 protein-coding common_peak1_43_305_-0.170977788812344_8.17189894828648_0.711086200995719 chr13 17626576 17627241 + 0.711086200995719 NA intron (NM_138654, intron 6 of 13) Lx2|LINE|L1 67857 NM_138654 192136 Mm.364180 NM_138654 ENSMUSG00000055137 Sugct 5033411D12Rik|D17907 succinyl-CoA glutarate-CoA transferase protein-coding common_peak1_70_447_0.125804623789413_8.87025723395231_0.710406469710108 chr11 76179117 76180380 + 0.710406469710108 NA promoter-TSS (NM_026664) promoter-TSS (NM_026664) -118 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding common_peak1_65_489_-0.132705680155334_8.8702850989249_0.710406469710108 chr7 38227039 38228159 + 0.710406469710108 NA intron (NM_024413, intron 1 of 1) intron (NM_024413, intron 1 of 1) 395 NM_024413 72287 Mm.333798 NM_024413 ENSMUSG00000074170 Plekhf1 1810013P09Rik|APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology domain containing, family F (with FYVE domain) member 1 protein-coding common_peak1_23_152_-0.243612374600557_7.13558165539237_0.71028088012381-3 chr15 36173373 36173942 + 0.71028088012381 NA promoter-TSS (NM_023127) promoter-TSS (NM_023127) -353 NM_023127 17749 Mm.27375 NM_023127 ENSMUSG00000045996 Polr2k ABC10-alpha|MafY|Mt1a|RPABC4|RPB10alpha|RPB12|RPB7.0 polymerase (RNA) II (DNA directed) polypeptide K protein-coding common_peak1_23_152_-0.243612374600557_7.13558165539237_0.71028088012381-4 chr15 73724216 73724632 + 0.71028088012381 NA promoter-TSS (NM_001166388) promoter-TSS (NM_001166388) -506 NM_001166388 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak1_23_152_-0.243612374600557_7.13558165539237_0.71028088012381 chr11 100814776 100815299 + 0.71028088012381 NA intron (NM_001113563, intron 1 of 18) intron (NM_001113563, intron 1 of 18) 7533 NM_011489 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding unique_peak2_23_152_-0.243612374600557_7.13558165539237_0.71028088012381-2 chr8 25611463 25612649 + 0.71028088012381 NA intron (NM_001308482, intron 1 of 7) B4A|SINE|B4 9772 NM_001308482 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Whsc1l1 6720429E03|A530023P05|AI528490|NSD3|WHISTLE Wolf-Hirschhorn syndrome candidate 1-like 1 (human) protein-coding common_peak1_23_152_-0.243612374600557_7.13558165539237_0.71028088012381-2 chr14 118136418 118136983 + 0.71028088012381 NA promoter-TSS (NM_021434) promoter-TSS (NM_021434) -427 NM_021434 58245 Mm.275411 NM_021434 ENSMUSG00000022131 Gpr180 AB041545|E130016I23Rik|Itr G protein-coupled receptor 180 protein-coding common_peak1_23_152_-0.243612374600557_7.13558165539237_0.71028088012381-5 chr9 119894433 119894764 + 0.71028088012381 NA promoter-TSS (NM_026236) promoter-TSS (NM_026236) -297 NM_026236 67561 Mm.104789 NM_026236 ENSMUSG00000032512 Wdr48 8430408H12Rik|Uaf1|mKIAA1449 WD repeat domain 48 protein-coding unique_peak2_23_152_-0.243612374600557_7.13558165539237_0.71028088012381 chr2 11541762 11542868 + 0.71028088012381 NA intron (NM_001177758, intron 1 of 14) ORR1F|LTR|ERVL-MaLR 11614 NM_001177758 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding common_peak1_179_1455_0.0716086197386474_10.543598950068_0.71027012279366 chr14 70065036 70066933 + 0.71027012279366 NA Intergenic Intergenic -11461 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding common_peak1_55_403_-0.145034421547514_8.58569427197804_0.709478802880382 chr2 102400353 102401107 + 0.709478802880382 NA 5' UTR (NM_020267, exon 1 of 5) 5' UTR (NM_020267, exon 1 of 5) 170 NM_020267 80985 Mm.315002 NM_020267 ENSMUSG00000027189 Trim44 Dipb|Mc7 tripartite motif-containing 44 protein-coding common_peak1_122_1020_-0.0901893696590914_9.95067246604826_0.709384154047088 chr2 3725971 3726953 + 0.709384154047088 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 13004 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_319_2992_0.0502069088780974_11.5724800179371_0.709213651087841 chr17 31323228 31328161 + 0.709213651087841 NA exon (NM_001242427, exon 9 of 20) exon (NM_001242427, exon 9 of 20) 29470 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak2_150_1302_-0.0791009835825829_10.3080708767768_0.708906014869918 chr9 44964489 44967009 + 0.708906014869918 NA promoter-TSS (NM_145400) promoter-TSS (NM_145400) -149 NM_145400 140630 Mm.215069 NM_145400 ENSMUSG00000059890 Ube4a 4732444G18Rik|9930123J21Rik|UFD2b ubiquitination factor E4A protein-coding common_peak2_73_471_0.123752913035926_8.9445195058798_0.708779105819781 chr1 91048381 91050656 + 0.708779105819781 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) -3926 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_339_3227_0.0484416069474243_11.6806456667515_0.708585006401212 chr7 120697439 120701818 + 0.708585006401212 NA intron (NM_001164580, intron 1 of 2) L1MCb|LINE|L1 22008 NM_001164580 233812 Mm.276479 NM_001164580 ENSMUSG00000046096 BC030336 - cDNA sequence BC030336 protein-coding common_peak1_41_289_-0.17582213503008_8.09199802249989_0.708513964196196 chr12 111712422 111713078 + 0.708513964196196 NA promoter-TSS (NM_001163388) promoter-TSS (NM_001163388) 506 NM_027404 70369 Mm.44239 NM_027404 ENSMUSG00000049792 Bag5 1600025G07Rik|4930405J06Rik|Bag-5 BCL2-associated athanogene 5 protein-coding common_peak2_483_5010_0.0389086445785818_12.3103371447189_0.708145497799263 chr1 155095761 155099783 + 0.708145497799263 NA 3' UTR (NM_010500, exon 1 of 1) 3' UTR (NM_010500, exon 1 of 1) 1864 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak1_43_241_0.167546816605713_8.00263664557745_0.708058626769968 chr10 19043507 19044273 + 0.708058626769968 NA Intergenic RLTR16|LTR|ERVK -28480 NM_009397 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_68_515_-0.128631935176459_8.94691128783503_0.707952342584532 chr3 96593424 96594451 + 0.707952342584532 NA intron (NM_027241, intron 1 of 7) intron (NM_027241, intron 1 of 7) 244 NM_001293701 69870 Mm.292739 NM_027241 ENSMUSG00000028104 Polr3gl 2010003I19Rik polymerase (RNA) III (DNA directed) polypeptide G like protein-coding common_peak2_122_900_0.0901944854051724_9.86048053851612_0.707709121104228 chr4 11253257 11254648 + 0.707709121104228 NA intron (NM_178112, intron 1 of 27) CpG 307 NM_178112 72656 Mm.246713 NM_178112 ENSMUSG00000040738 Ints8 2810013E07Rik|AV063769|D130008D20Rik integrator complex subunit 8 protein-coding unique_peak2_18_117_-0.282278845964951_6.74150362637937_0.707505619155811-2 chr9 80317749 80318598 + 0.707505619155811 NA intron (NM_022016, intron 15 of 16) intron (NM_022016, intron 15 of 16) 147265 NM_022016 63859 Mm.422780 NM_022016 ENSMUSG00000032343 Impg1 A930015H12Rik|IMP150|SPACR interphotoreceptor matrix proteoglycan 1 protein-coding common_peak1_18_117_-0.282278845964951_6.74150362637937_0.707505619155811-2 chr4 45296965 45297575 + 0.707505619155811 NA intron (NM_027266, intron 1 of 8) intron (NM_027266, intron 1 of 8) 102 NM_027266 69934 Mm.46761 NM_027266 ENSMUSG00000035601 Trmt10b 2610042J10Rik|Rg9mtd3|Rnmtd3 tRNA methyltransferase 10B protein-coding unique_peak2_18_117_-0.282278845964951_6.74150362637937_0.707505619155811 chr13 19272482 19273426 + 0.707505619155811 NA Intergenic Intergenic 122859 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak1_18_117_-0.282278845964951_6.74150362637937_0.707505619155811 chr4 11190826 11191315 + 0.707505619155811 NA promoter-TSS (NM_001282943) promoter-TSS (NM_001282943) -281 NM_001037134 12448 Mm.35867 NM_009830 ENSMUSG00000028212 Ccne2 - cyclin E2 protein-coding common_peak1_18_117_-0.282278845964951_6.74150362637937_0.707505619155811-5 chrX 162828701 162829231 + 0.707505619155811 NA intron (NM_001290776, intron 1 of 10) CpG 488 NM_001290776 353170 Mm.270186 NM_178935 ENSMUSG00000038344 Txlng 4932441K18Rik|Fiat|Lrp taxilin gamma protein-coding common_peak2_18_117_-0.282278845964951_6.74150362637937_0.707505619155811 chr17 17345944 17346440 + 0.707505619155811 NA Intergenic CpG -28140 NM_025934 67045 Mm.35117 NM_025934 ENSMUSG00000023852 Riok2 2010110K24Rik|2410085M17Rik RIO kinase 2 (yeast) protein-coding common_peak1_18_117_-0.282278845964951_6.74150362637937_0.707505619155811-4 chr5 113630144 113630634 + 0.707505619155811 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 20001 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak1_18_117_-0.282278845964951_6.74150362637937_0.707505619155811-3 chr5 21262021 21262516 + 0.707505619155811 NA intron (NM_175437, intron 19 of 30) intron (NM_175437, intron 19 of 30) 76001 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_50_292_0.152913922705208_8.27121381577485_0.707419956202564 chrX 159532616 159533329 + 0.707419956202564 NA intron (NM_001033472, intron 1 of 11) CpG 304 NM_001033472 382252 Mm.296254 NM_001033472 ENSMUSG00000044150 A830080D01Rik 2310067E24Rik|Gm1146 RIKEN cDNA A830080D01 gene protein-coding common_peak2_103_836_-0.100437945536699_9.65886483978199_0.707336192860201 chr19 21035995 21037554 + 0.707336192860201 NA Intergenic Intergenic -67936 NR_126458 75354 Mm.243873 NR_126458 4930554I06Rik - RIKEN cDNA 4930554I06 gene ncRNA common_peak1_82_640_-0.114674677450394_9.26684320789354_0.707226338748111 chr18 70643783 70645018 + 0.707226338748111 NA Intergenic Intergenic 76108 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak1_126_1060_-0.0889982467407204_10.0067098175444_0.706686120029806 chrX 71364357 71366036 + 0.706686120029806 NA intron (NM_001313706, intron 1 of 15) intron (NM_001313706, intron 1 of 15) 436 NM_001313706 53332 Mm.219672 NM_016985 ENSMUSG00000015214 Mtmr1 AW049210 myotubularin related protein 1 protein-coding common_peak1_165_1314_0.0752710961750402_10.3984826322672_0.706648938380741 chr1 144004362 144005758 + 0.706648938380741 NA promoter-TSS (NM_009061) promoter-TSS (NM_009061) -911 NM_009061 19735 Mm.28262 NM_009061 ENSMUSG00000026360 Rgs2 GOS8 regulator of G-protein signaling 2 protein-coding common_peak2_39_273_-0.180285544143395_8.00788931088883_0.706476015791646 chr13 21452973 21453980 + 0.706476015791646 NA intron (NM_001013786, intron 1 of 3) intron (NM_001013786, intron 1 of 3) 251 NM_001013786 432731 Mm.390557 NM_001013786 ENSMUSG00000022228 Zscan26 BC068174|Zfp187|Znf187 zinc finger and SCAN domain containing 26 protein-coding common_peak1_39_273_-0.180285544143395_8.00788931088883_0.706476015791646 chr12 102690378 102691009 + 0.706476015791646 NA intron (NM_172584, intron 1 of 9) B1_Mus2|SINE|Alu -5673 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak2_60_368_0.137042444986577_8.59599822855368_0.706309975221813 chr18 80628415 80630415 + 0.706309975221813 NA intron (NM_198429, intron 9 of 9) intron (NM_198429, intron 9 of 9) 78758 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_63_471_-0.133165163863961_8.81606046742986_0.706302573707662 chr4 148444227 148444867 + 0.706302573707662 NA 5' UTR (NM_027873, exon 1 of 2) 5' UTR (NM_027873, exon 1 of 2) 204 NM_027873 71707 Mm.292503 NM_027873 ENSMUSG00000047719 Ubiad1 1200002M06Rik|AI426463|AW320947|Tere1 UbiA prenyltransferase domain containing 1 protein-coding common_peak2_136_1032_0.0837130176697993_10.0544810477_0.706287852228 chr10 8195441 8198778 + 0.706287852228 NA Intergenic Intergenic -240986 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak2_91_723_-0.108160460616983_9.44576565677471_0.705994767619639 chr4 130016317 130018611 + 0.705994767619639 NA intron (NM_173071, intron 24 of 29) intron (NM_173071, intron 24 of 29) 25410 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding unique_peak2_8_52_-0.449847403876887_5.50299675262475_0.705686442909787 chr1 173801706 173802152 + 0.705686442909787 NA Intergenic Intergenic -35010 NM_008329 15951 Mm.261270 NM_008329 ENSMUSG00000073489 Ifi204 Ifi16|p204 interferon activated gene 204 protein-coding common_peak1_79_521_0.116452853433604_9.08613242328669_0.705674752223245 chr2 132642844 132644203 + 0.705674752223245 NA intron (NR_033468, intron 4 of 5) intron (NR_033468, intron 4 of 5) 45327 NR_033469 767814 Mm.371752 NR_033468 ENSMUSG00000074783 AU019990 - expressed sequence AU019990 ncRNA common_peak1_53_386_-0.147369878118459_8.52250481708518_0.705656193858278 chr14 27243128 27243971 + 0.705656193858278 NA intron (NM_027871, intron 1 of 10) intron (NM_027871, intron 1 of 10) 5539 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_23_108_0.245591143315169_6.89097989643451_0.705619184826582 chr1 138275988 138276563 + 0.705619184826582 NA intron (NM_177397, intron 1 of 2) intron (NM_177397, intron 1 of 2) 2537 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_23_108_0.245591143315169_6.89097989643451_0.705619184826582-3 chr16 38131557 38132127 + 0.705619184826582 NA intron (NM_019827, intron 1 of 10) intron (NM_019827, intron 1 of 10) -42582 NR_033221 414072 Mm.483602 NR_033221 BC031361 - cDNA sequence BC031361 ncRNA unique_peak2_23_108_0.245591143315169_6.89097989643451_0.705619184826582 chr11 72196703 72197448 + 0.705619184826582 NA intron (NM_028963, intron 3 of 18) intron (NM_028963, intron 3 of 18) 6296 NM_028963 74477 Mm.289697 NM_028963 ENSMUSG00000020807 4933427D14Rik C85113|Kiaa0753|MNR RIKEN cDNA 4933427D14 gene protein-coding common_peak1_23_108_0.245591143315169_6.89097989643451_0.705619184826582-4 chr4 32387517 32388099 + 0.705619184826582 NA Intergenic Intergenic -29627 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_23_108_0.245591143315169_6.89097989643451_0.705619184826582 chr11 97029791 97030491 + 0.705619184826582 NA intron (NM_146027, intron 1 of 7) intron (NM_146027, intron 1 of 7) 189 NM_146027 217140 Mm.46189 NM_146027 ENSMUSG00000020877 Scrn2 AV001119|D11Moh48|SES2 secernin 2 protein-coding common_peak1_23_108_0.245591143315169_6.89097989643451_0.705619184826582-2 chr15 79208650 79209288 + 0.705619184826582 NA intron (NR_029470, intron 2 of 4) intron (NR_029470, intron 2 of 4) -20204 NM_008837 18693 Mm.259464 NM_008837 ENSMUSG00000068206 Pick1 Prkcabp protein interacting with C kinase 1 protein-coding common_peak1_113_932_-0.0946222401152284_9.81842215079415_0.705575365851206 chr2 94405888 94406982 + 0.705575365851206 NA promoter-TSS (NR_027831) promoter-TSS (NR_027831) 254 NM_183106 74569 Mm.248504 NM_183106 ENSMUSG00000027194 Ttc17 9130020K17Rik|D2Bwg1005e tetratricopeptide repeat domain 17 protein-coding common_peak1_68_431_0.127707818083326_8.81874141120513_0.705404341707902 chr9 73067753 73069018 + 0.705404341707902 NA intron (NM_001301232, intron 1 of 5) LTR81B|LTR|Gypsy 4237 NM_001301232 11891 Mm.34867 NM_023635 ENSMUSG00000032202 Rab27a 2210402C08Rik|2410003M20Rik|4933437C11Rik|ash RAB27A, member RAS oncogene family protein-coding common_peak1_103_728_0.0988708626867076_9.55921043567029_0.705332229309038 chr3 32708562 32709576 + 0.705332229309038 NA intron (NM_019673, intron 1 of 13) CpG 523 NM_019673 56456 Mm.41077 NM_019673 ENSMUSG00000027671 Actl6a 2810432C06Rik|AI851094|ARP4|Actl6|Baf53a|C79802 actin-like 6A protein-coding common_peak1_41_227_0.171196940820113_7.9184884845748_0.705075140116804 chr8 36169280 36169992 + 0.705075140116804 NA Intergenic Intergenic 74808 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak2_41_227_0.171196940820113_7.9184884845748_0.705075140116804-2 chr15 78606536 78607752 + 0.705075140116804 NA intron (NM_028195, intron 5 of 12) intron (NM_028195, intron 5 of 12) 10097 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak2_41_227_0.171196940820113_7.9184884845748_0.705075140116804 chr10 67003769 67005224 + 0.705075140116804 NA promoter-TSS (NR_110511) promoter-TSS (NR_110511) -579 NR_110511 102634101 Mm.445258 NR_110511 Gm31763 - predicted gene, 31763 ncRNA common_peak2_37_257_-0.184250740840008_7.91910188500325_0.705075140116804 chr14 26358455 26359900 + 0.705075140116804 NA intron (NR_038005, intron 1 of 7) intron (NR_038005, intron 1 of 7) 1630 NR_038005 71106 Mm.158564 NR_038005 ENSMUSG00000021874 4933413J09Rik GCSE RIKEN cDNA 4933413J09 gene ncRNA common_peak1_25_167_-0.236896178137829_7.27386933370985_0.704907602023809 chr11 117321998 117322638 + 0.704907602023809 NA intron (NM_001113487, intron 2 of 10) intron (NM_001113487, intron 2 of 10) -9397 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_25_167_-0.236896178137829_7.27386933370985_0.704907602023809-2 chr3 19259000 19259536 + 0.704907602023809 NA intron (NM_008802, intron 2 of 12) RLTR12A|LTR|ERVK 5740 NM_008802 18583 Mm.355614 NM_008802 ENSMUSG00000069094 Pde7a AU015378|AW047537 phosphodiesterase 7A protein-coding unique_peak2_12_77_-0.356593285407672_6.10710557615841_0.704761247860639 chr5 121106223 121106953 + 0.704761247860639 NA Intergenic Intergenic 84809 NM_001109992 19247 Mm.8681 NM_011202 ENSMUSG00000043733 Ptpn11 2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp protein tyrosine phosphatase, non-receptor type 11 protein-coding common_peak1_12_77_-0.356593285407672_6.10710557615841_0.704761247860639 chr17 28699720 28700091 + 0.704761247860639 NA intron (NM_001168514, intron 2 of 12) intron (NM_001168514, intron 2 of 12) 7337 NM_001168513 26416 Mm.311337 NM_011951 ENSMUSG00000053436 Mapk14 CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha mitogen-activated protein kinase 14 protein-coding common_peak1_266_2579_-0.0560024653931439_11.305154117614_0.704757222887264 chr9 7836049 7837885 + 0.704757222887264 NA promoter-TSS (NM_007465) promoter-TSS (NM_007465) 90 NM_007465 11797 Mm.335659 NM_007465 ENSMUSG00000057367 Birc2 AW146227|Api1|Api2|Birc3|C-IAP1|C330006D17Rik|HIAP1|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF48|cIAP1|cIAP2|mcIAP1 baculoviral IAP repeat-containing 2 protein-coding common_peak1_181_1476_0.0705032431416139_10.5637057323356_0.70459069473443 chr11 103114968 103116060 + 0.70459069473443 NA promoter-TSS (NM_138753) promoter-TSS (NM_138753) -811 NM_138753 192231 Mm.8763 NM_138753 ENSMUSG00000048878 Hexim1 7330426E13Rik|CLP-1|Clp1|HIS1 hexamethylene bis-acetamide inducible 1 protein-coding common_peak1_85_571_0.112468144661916_9.21610540910935_0.704565111781115 chr4 148151071 148152225 + 0.704565111781115 NA 5' UTR (NM_001163704, exon 1 of 6) 5' UTR (NM_001163704, exon 1 of 6) 277 NM_001163705 50762 Mm.27445 NM_015797 ENSMUSG00000055401 Fbxo6 AA408845|FBG2|Fbs2|Fbx6b|Fbxo6b F-box protein 6 protein-coding common_peak1_85_571_0.112468144661916_9.21610540910935_0.704565111781115-2 chr7 141474929 141475703 + 0.704565111781115 NA promoter-TSS (NM_025593) promoter-TSS (NM_025593) 80 NM_053082 64540 Mm.489619 NM_053082 ENSMUSG00000025511 Tspan4 AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4 tetraspanin 4 protein-coding common_peak2_85_571_0.112468144661916_9.21610540910935_0.704565111781115 chr15 85656848 85658493 + 0.704565111781115 NA Intergenic Intergenic -46103 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_58_429_-0.142666444547634_8.67685962731564_0.704455990262991-2 chr17 34951857 34953163 + 0.704455990262991 NA promoter-TSS (NR_015536) promoter-TSS (NR_015536) -39 NR_015536 68763 Mm.28895 NR_015536 ENSMUSG00000092203 1110038B12Rik 0610009C20Rik|0910001G04Rik RIKEN cDNA 1110038B12 gene ncRNA common_peak1_58_429_-0.142666444547634_8.67685962731564_0.704455990262991 chr1 60746367 60747124 + 0.704455990262991 NA intron (NM_007642, intron 1 of 3) intron (NM_007642, intron 1 of 3) 357 NM_007642 12487 Mm.255003 NM_007642 ENSMUSG00000026012 Cd28 - CD28 antigen protein-coding common_peak1_58_429_-0.142666444547634_8.67685962731564_0.704455990262991-2 chr7 45897049 45897758 + 0.704455990262991 NA promoter-TSS (NM_021482) promoter-TSS (NM_021482) 334 NM_144801 70209 Mm.163766 NM_144801 ENSMUSG00000002781 Tmem143 2310076O21Rik|AI481604 transmembrane protein 143 protein-coding common_peak2_58_429_-0.142666444547634_8.67685962731564_0.704455990262991 chr14 121324119 121326490 + 0.704455990262991 NA intron (NM_145465, intron 2 of 10) intron (NM_145465, intron 2 of 10) 53926 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_35_241_-0.187565564215571_7.82508045516681_0.70444229707314-2 chr17 83729659 83730364 + 0.70444229707314 NA intron (NM_001171052, intron 3 of 15) Lx8|LINE|L1 23848 NM_001171052 116871 Mm.277668 NM_054082 ENSMUSG00000055817 Mta3 1110002J22Rik|mKIAA1266 metastasis associated 3 protein-coding common_peak1_35_241_-0.187565564215571_7.82508045516681_0.70444229707314 chr17 12756224 12756981 + 0.70444229707314 NA intron (NM_010515, intron 1 of 47) ID_B1|SINE|B4 13104 NM_010515 16004 Mm.26553 NM_010515 ENSMUSG00000023830 Igf2r AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300 insulin-like growth factor 2 receptor protein-coding common_peak1_97_675_0.102609111814857_9.45218399218961_0.704259674741672 chr12 102284488 102286429 + 0.704259674741672 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 1817 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak2_27_181_-0.221229890180771_7.39717969510831_0.704121335403021-2 chr1 171488744 171490149 + 0.704121335403021 NA Intergenic RLTR4_Mm|LTR|ERV1 -14032 NM_019484 56009 Mm.389208 NM_019484 ENSMUSG00000060244 Alyref2 C130042O11Rik|REF2|Refbp2 Aly/REF export factor 2 protein-coding unique_peak2_27_181_-0.221229890180771_7.39717969510831_0.704121335403021-3 chr9 32530688 32531881 + 0.704121335403021 NA intron (NM_008026, intron 1 of 8) MER121|DNA|TcMar? 10168 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding unique_peak2_27_181_-0.221229890180771_7.39717969510831_0.704121335403021 chr1 98094832 98096149 + 0.704121335403021 NA 5' UTR (NM_013626, exon 1 of 26) 5' UTR (NM_013626, exon 1 of 26) 142 NM_013626 18484 Mm.5121 NM_013626 ENSMUSG00000026335 Pam PHM peptidylglycine alpha-amidating monooxygenase protein-coding common_peak1_347_3323_0.0473177862682199_11.7223635599045_0.704110743850137 chr18 65429542 65432151 + 0.704110743850137 NA promoter-TSS (NM_172833) promoter-TSS (NM_172833) -151 NM_172833 240354 Mm.132613 NM_172833 ENSMUSG00000032688 Malt1 A630046N12|D430033E09Rik|Pcasp1 MALT1 paracaspase protein-coding common_peak1_48_277_0.157935164187178_8.19790865481709_0.704093137547946 chr7 100589463 100590459 + 0.704093137547946 NA intron (NR_003559, intron 1 of 7) intron (NR_003559, intron 1 of 7) -6831 NM_198831 52443 Mm.473730 NM_198831 ENSMUSG00000030706 Mrpl48 1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e mitochondrial ribosomal protein L48 protein-coding common_peak2_275_2488_0.0544694276384696_11.3085852288003_0.703802104025113 chr2 32532832 32538028 + 0.703802104025113 NA promoter-TSS (NM_153560) promoter-TSS (NM_153560) 71 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak2_206_1899_-0.0650538668182321_10.8592567698092_0.703735734184327 chr10 68540438 68543235 + 0.703735734184327 NA promoter-TSS (NM_028491) promoter-TSS (NM_028491) 39 NM_028491 73287 Mm.141830 NM_028491 ENSMUSG00000019945 1700040L02Rik - RIKEN cDNA 1700040L02 gene protein-coding common_peak1_91_623_0.106283207603974_9.33854382266423_0.703728840987778 chr6 47748580 47749576 + 0.703728840987778 NA Intergenic CpG 3847 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_66_497_-0.129458231918358_8.8952728161089_0.703521685207046-2 chr19 4162615 4163903 + 0.703521685207046 NA promoter-TSS (NM_021485) promoter-TSS (NM_021485) -14 NM_021485 58988 Mm.271937 NM_021485 ENSMUSG00000024830 Rps6kb2 70kDa|S6K2 ribosomal protein S6 kinase, polypeptide 2 protein-coding common_peak2_66_497_-0.129458231918358_8.8952728161089_0.703521685207046 chr17 74394805 74396291 + 0.703521685207046 NA promoter-TSS (NM_144798) promoter-TSS (NM_144798) -60 NM_001252478 210148 Mm.243943 NM_144798 ENSMUSG00000024069 Slc30a6 9530029F08Rik|ZnT6 solute carrier family 30 (zinc transporter), member 6 protein-coding common_peak1_46_329_-0.163191126819799_8.28472665083592_0.703508467255224 chr11 115823849 115824774 + 0.703508467255224 NA intron (NM_145438, intron 1 of 25) CpG 253 NM_001252532 217325 Mm.290450 NM_145438 ENSMUSG00000020782 Llgl2 9130006H11Rik|Llglh2 lethal giant larvae homolog 2 (Drosophila) protein-coding common_peak1_130_975_0.0863499242839865_9.97391229970488_0.702884215901399 chr3 104510930 104511975 + 0.702884215901399 NA intron (NM_001310698, intron 1 of 17) CpG 466 NM_001310698 269473 Mm.34855 NM_001025067 ENSMUSG00000032913 Lrig2 4632419I10Rik|BB096938|LIG-2 leucine-rich repeats and immunoglobulin-like domains 2 protein-coding common_peak2_33_226_-0.196399915130388_7.72834852972572_0.702839880969243 chr4 155840553 155841609 + 0.702839880969243 NA exon (NM_024263, exon 3 of 10) exon (NM_024263, exon 3 of 10) 1401 NM_024263 74761 Mm.159028 NM_024263 ENSMUSG00000029070 Mxra8 1200013A08Rik|1700095D18Rik|AI131686|Asp3|Dicam matrix-remodelling associated 8 protein-coding common_peak1_163_1437_-0.0751800730011585_10.4522579239387_0.702819863102919 chr13 93191507 93192986 + 0.702819863102919 NA promoter-TSS (NM_133905) promoter-TSS (NM_133905) 37 NM_133905 100715 Mm.242865 NM_133905 ENSMUSG00000042167 Papd4 8030446C20Rik|AI649009|GLD-2|Gld2 PAP associated domain containing 4 protein-coding common_peak1_253_2242_0.0576091002741279_11.1600184552233_0.702703528230738 chr4 46566387 46569564 + 0.702703528230738 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) -1535 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak2_39_213_0.176279552415986_7.82960676260914_0.702666643504747 chr1 131152756 131153804 + 0.702666643504747 NA promoter-TSS (NM_001136070) promoter-TSS (NM_001136070) 73 NM_010709 16865 Mm.276294 NM_010709 ENSMUSG00000026427 Eif2d D1Ertd5e|Lgtn eukaryotic translation initiation factor 2D protein-coding common_peak1_39_213_0.176279552415986_7.82960676260914_0.702666643504747 chr10 39898514 39899434 + 0.702666643504747 NA non-coding (NR_033628, exon 1 of 4) non-coding (NR_033628, exon 1 of 4) 264 NR_033628 213332 Mm.484359 NR_033628 Mfsd4b4 AA474331 major facilitator superfamily domain containing 4B4 pseudo common_peak1_31_211_-0.205054880251675_7.62539301443736_0.702103012052677 chr17 12371582 12372218 + 0.702103012052677 NA Intergenic Intergenic -6709 NM_008877 18815 Mm.971 NM_008877 ENSMUSG00000059481 Plg AI649309|Pg plasminogen protein-coding common_peak1_80_622_-0.116746270031124_9.22471521800844_0.70186674320282 chr2 166714009 166714800 + 0.70186674320282 NA promoter-TSS (NM_177782) promoter-TSS (NM_177782) -572 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding common_peak2_258_2298_0.0565290097587017_11.1950552555975_0.70159080593163 chr14 14344995 14350474 + 0.70159080593163 NA intron (NM_008369, intron 2 of 11) intron (NM_008369, intron 2 of 11) 1239 NM_008369 16188 Mm.425857 NM_008369 ENSMUSG00000068758 Il3ra CD123|CDw123|SUT-1 interleukin 3 receptor, alpha chain protein-coding common_peak1_18_79_0.278436108509528_6.46114614914213_0.701478133004951 chr18 65207390 65207859 + 0.701478133004951 NA intron (NM_031881, intron 25 of 29) intron (NM_031881, intron 25 of 29) -41237 NR_029600 387231 NR_029600 ENSMUSG00000065402 Mir122 Mir122a|Mirn122a|mir-122|mmu-mir-122 microRNA 122 ncRNA unique_peak2_18_79_0.278436108509528_6.46114614914213_0.701478133004951 chr13 112426231 112427114 + 0.701478133004951 NA Intergenic Intergenic -37398 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding common_peak2_18_79_0.278436108509528_6.46114614914213_0.701478133004951 chr5 135545650 135546186 + 0.701478133004951 NA promoter-TSS (NM_146001) promoter-TSS (NM_146001) -796 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak1_18_79_0.278436108509528_6.46114614914213_0.701478133004951-2 chr3 58469779 58470219 + 0.701478133004951 NA Intergenic Intergenic 54310 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 protein-coding common_peak1_15_97_-0.31845658099004_6.45548155362019_0.701478133004951 chr14 121883305 121883702 + 0.701478133004951 NA intron (NM_026861, intron 1 of 8) intron (NM_026861, intron 1 of 8) -4095 NR_130999 78312 Mm.188743 NR_130999 ENSMUSG00000102112 1810041H14Rik - RIKEN cDNA 1810041H14 gene ncRNA common_peak1_18_79_0.278436108509528_6.46114614914213_0.701478133004951-3 chr7 106210923 106211461 + 0.701478133004951 NA intron (NM_029000, intron 1 of 3).2 Lx3_Mus|LINE|L1 4145 NM_001243039 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak1_74_480_0.120256624519625_8.97002139602985_0.701457045023851 chr5 52833913 52834770 + 0.701457045023851 NA exon (NM_024213, exon 1 of 28) exon (NM_024213, exon 1 of 28) 206 NM_024213 52206 Mm.272568 NM_024213 ENSMUSG00000029176 Anapc4 2610306D21Rik|APC4|D5Ertd249e anaphase promoting complex subunit 4 protein-coding common_peak1_61_454_-0.136428219165396_8.76150862550336_0.701443199981919 chr9 22131150 22132264 + 0.701443199981919 NA intron (NM_001102405, intron 1 of 4) intron (NM_001102405, intron 1 of 4) 158 NM_001102404 11433 Mm.46354 NM_007388 ENSMUSG00000001348 Acp5 TRACP|TRAP acid phosphatase 5, tartrate resistant protein-coding common_peak1_462_5010_-0.039588231208004_12.2710887068256_0.70139737027909 chr17 73948997 73953458 + 0.70139737027909 NA Intergenic Intergenic -1031 NM_011723 22436 Mm.11223 NM_011723 ENSMUSG00000024066 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase protein-coding common_peak2_44_312_-0.163840209367986_8.20809874224862_0.701362279342828 chr8 108714288 108715697 + 0.701362279342828 NA 5' UTR (NM_007496, exon 1 of 10) 5' UTR (NM_007496, exon 1 of 10) 348 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_37_199_0.183120324808522_7.73541635217899_0.700950719132159 chr8 84825667 84826384 + 0.700950719132159 NA intron (NR_033145, intron 1 of 1) MTB|LTR|ERVL-MaLR -3202 NM_201227 23863 Mm.304252 NM_201227 ENSMUSG00000053226 Dand5 Cerl-2|Cerr2|Dte|GREM3|coco DAN domain family member 5, BMP antagonist protein-coding common_peak2_92_732_-0.106852667246221_9.4642430545107_0.700833724205088 chr19 34549891 34551542 + 0.700833724205088 NA promoter-TSS (NM_008332) promoter-TSS (NM_008332) 22 NM_008332 15958 Mm.2036 NM_008332 ENSMUSG00000045932 Ifit2 AV302338|Ifi54|P54 interferon-induced protein with tetratricopeptide repeats 2 protein-coding common_peak1_104_737_0.0981032246164233_9.57652861836861_0.700564460977922 chr15 93335762 93337680 + 0.700564460977922 NA intron (NM_024189, intron 1 of 3) CpG-5264 214 NR_028315 67057 Mm.4714 NM_024189 ENSMUSG00000022634 Yaf2 2810021M11Rik YY1 associated factor 2 protein-coding common_peak1_612_6721_0.0332442767397829_12.7312969656779_0.699631883298013 chr6 128796602 128801592 + 0.699631883298013 NA Intergenic CpG -10456 NM_001159904 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak1_25_121_0.224683907078045_7.04307929110191_0.699595323113929 chr11 88993722 88994287 + 0.699595323113929 NA Intergenic RLTR9D2|LTR|ERVK -5399 NM_009546 217069 Mm.248445 NM_009546 ENSMUSG00000000275 Trim25 AA960166|AL022677|EFP|Zfp147 tripartite motif-containing 25 protein-coding common_peak1_72_550_-0.12358948218553_9.04411376747839_0.699248542730678 chr4 62660421 62661799 + 0.699248542730678 NA intron (NM_134257, intron 10 of 15) intron (NM_134257, intron 10 of 15) -12864 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_187_1538_0.0685781934705219_10.6220666130635_0.698988124608513 chr3 88949599 88951299 + 0.698988124608513 NA promoter-TSS (NM_001164533) promoter-TSS (NM_001164533) -167 NM_001164533 65111 Mm.29028 NM_022994 ENSMUSG00000068921 Dap3 4921514D13Rik|DAP-3|MRP-S29|S29mt death associated protein 3 protein-coding common_peak2_27_133_0.220475559560153_7.17632697023785_0.698927777830625 chr4 8810264 8811193 + 0.698927777830625 NA intron (NM_001277149, intron 6 of 37) intron (NM_001277149, intron 6 of 37) 120322 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_20_131_-0.266919475559956_6.91093438157848_0.69888678845 chr1 192063612 192064107 + 0.69888678845 NA intron (NM_011633, intron 3 of 9) MTD-int|LTR|ERVL-MaLR 28740 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak1_20_131_-0.266919475559956_6.91093438157848_0.69888678845-2 chr9 21545738 21546203 + 0.69888678845 NA promoter-TSS (NM_021531) promoter-TSS (NM_021531) -924 NM_021531 59035 Mm.178115 NM_021531 ENSMUSG00000032185 Carm1 Prmt4 coactivator-associated arginine methyltransferase 1 protein-coding common_peak1_83_555_0.111758193447704_9.17482016944736_0.698612088263877 chr2 150830312 150831670 + 0.698612088263877 NA 3' UTR (NM_153781, exon 20 of 20) 3' UTR (NM_153781, exon 20 of 20) 44195 NM_153781 110078 Mm.222584 NM_153781 ENSMUSG00000033059 Pygb - brain glycogen phosphorylase protein-coding common_peak1_86_580_0.110403477261324_9.23759609203519_0.698544121951883-2 chr9 72961330 72962747 + 0.698544121951883 NA exon (NM_026314, exon 4 of 9) exon (NM_026314, exon 4 of 9) 3253 NM_001163725 67685 Mm.31817 NM_026314 ENSMUSG00000089865 Dyx1c1 1700010I24Rik|Dnaaf4|EKN1|b2b811.1Clo|b2b811Clo dyslexia susceptibility 1 candidate 1 protein-coding common_peak1_86_580_0.110403477261324_9.23759609203519_0.698544121951883 chr5 76588642 76589562 + 0.698544121951883 NA Intergenic CpG -2612 NM_199032 381644 Mm.332452 NM_199032 ENSMUSG00000036403 Cep135 BC062951|Cep4|Gm1044 centrosomal protein 135 protein-coding common_peak1_105_854_-0.0974265331437927_9.69106734320136_0.698484114911616 chr6 58595947 58597394 + 0.698484114911616 NA promoter-TSS (NM_011920) promoter-TSS (NM_011920) -2 NM_011920 26357 Mm.333096 NM_011920 ENSMUSG00000029802 Abcg2 ABC15|ABCP|AI428558|BCRP|Bcrp1|MXR|MXR1 ATP-binding cassette, sub-family G (WHITE), member 2 protein-coding common_peak2_69_439_0.12669831218523_8.84470886961727_0.698359373599908 chr19 42128287 42130783 + 0.698359373599908 NA promoter-TSS (NM_027106) promoter-TSS (NM_027106) -542 NM_027106 69534 Mm.30060 NM_027106 ENSMUSG00000018821 Avpi1 2310008N12Rik|AA410041|VIT32|esu|mVIT32 arginine vasopressin-induced 1 protein-coding common_peak2_42_296_-0.168591950546816_8.13002314552736_0.698315611102633 chr15 75682165 75684275 + 0.698315611102633 NA Intergenic Intergenic -4430 NM_028404 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding common_peak1_346_3312_0.0470075082103403_11.7174262421862_0.69829685387126 chr7 114290065 114293520 + 0.69829685387126 NA Intergenic Intergenic -15676 NM_011965 26440 Mm.121265 NM_011965 ENSMUSG00000030751 Psma1 C2|HC2|Pros-30|alpha-type proteasome (prosome, macropain) subunit, alpha type 1 protein-coding common_peak1_192_1746_-0.0678586004705011_10.7367345926815_0.698140154358839 chr2 34958280 34959801 + 0.698140154358839 NA intron (NM_009421, intron 3 of 10) intron (NM_009421, intron 3 of 10) 2732 NM_009421 22029 Mm.239514 NM_009421 ENSMUSG00000026875 Traf1 4732496E14Rik TNF receptor-associated factor 1 protein-coding common_peak2_146_1261_-0.0804854419185812_10.2612534740233_0.698135903841249 chr2 112491955 112494131 + 0.698135903841249 NA promoter-TSS (NM_028844) promoter-TSS (NM_028844) 79 NM_028844 74268 Mm.315125 NM_028844 ENSMUSG00000003604 Aven 1700013A01Rik|1700056A21Rik|mAven-L|mAven-S apoptosis, caspase activation inhibitor protein-coding common_peak1_111_800_0.0941309399819268_9.69272390239967_0.698003630769699 chr17 35666917 35668350 + 0.698003630769699 NA promoter-TSS (NM_175137) promoter-TSS (NM_175137) -41 NM_175137 68915 Mm.32002 NM_175137 ENSMUSG00000038838 Vars2 1190004I24Rik|Vars2l|mKIAA1885 valyl-tRNA synthetase 2, mitochondrial protein-coding common_peak2_139_1189_-0.0820755212990605_10.1757080975458_0.69773033557348 chr16 91687946 91689718 + 0.69773033557348 NA promoter-TSS (NM_021720) promoter-TSS (NM_021720) -66 NR_040389 100038392 Mm.440384 NR_040389 ENSMUSG00000085169 Gm10785 ENSMUSG00000074911 predicted gene 10785 ncRNA common_peak2_49_353_-0.154978046760256_8.39011652670287_0.697641209752579 chr14 121408365 121409789 + 0.697641209752579 NA Intergenic Intergenic -29847 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_161_1416_-0.0756696487387831_10.4307892185486_0.697538477005174 chr5 105109609 105111915 + 0.697538477005174 NA promoter-TSS (NM_172777) promoter-TSS (NM_172777) -470 NM_172777 236573 Mm.425261 NM_172777 ENSMUSG00000029298 Gbp9 - guanylate-binding protein 9 protein-coding common_peak2_208_1757_0.064026261381338_10.8117324858341_0.697364798527639 chr9 118039856 118042106 + 0.697364798527639 NA intron (NM_013727, intron 1 of 7) CpG 459 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_150_1301_-0.0779933481800832_10.3075170590756_0.697324150184123 chr18 80206002 80208052 + 0.697324150184123 NA 5' UTR (NM_178604, exon 1 of 4) 5' UTR (NM_178604, exon 1 of 4) 160 NM_001042408 27366 Mm.172411 NM_025299 ENSMUSG00000057130 Txnl4a D18Wsu98e|Dim1|ENSMUSG00000057130|Txnl4|U5-15kD|U5-15kDa thioredoxin-like 4A protein-coding common_peak2_44_248_0.166176705496551_8.04309028481636_0.697233051805215 chr4 135474856 135476908 + 0.697233051805215 NA intron (NM_028995, intron 5 of 11) B1_Mus1|SINE|Alu 18622 NM_028995 74552 Mm.26548 NM_028995 ENSMUSG00000028803 Nipal3 9130020G22Rik|AI480660|Npal3 NIPA-like domain containing 3 protein-coding unique_peak2_29_146_0.208984087761339_7.30416438871703_0.697224096900823 chr15 33082815 33083880 + 0.697224096900823 NA intron (NM_176073, intron 1 of 7) intron (NM_176073, intron 1 of 7) 218 NM_176073 54381 Mm.158251 NM_018755 ENSMUSG00000039007 Cpq 1190003P12Rik|2610034C17Rik|Hls2|Lal-1|Pgcp carboxypeptidase Q protein-coding common_peak2_29_146_0.208984087761339_7.30416438871703_0.697224096900823 chr12 35534205 35535159 + 0.697224096900823 NA 5' UTR (NM_013464, exon 1 of 11) 5' UTR (NM_013464, exon 1 of 11) 307 NM_013464 11622 Mm.341377 NM_013464 ENSMUSG00000019256 Ahr Ah|Ahh|Ahre|In|bHLHe76 aryl-hydrocarbon receptor protein-coding common_peak1_54_394_-0.14441782467855_8.55349993072519_0.697028600512432 chr16 4886229 4886893 + 0.697028600512432 NA intron (NM_029657, intron 1 of 16) CpG 461 NM_001252437 17237 Mm.291326 NM_029657 ENSMUSG00000022517 Mgrn1 2610042J20Rik|mKIAA0544|md|nc mahogunin, ring finger 1 protein-coding common_peak2_54_394_-0.14441782467855_8.55349993072519_0.697028600512432 chr2 170204951 170206158 + 0.697028600512432 NA Intergenic Intergenic -62879 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_96_769_-0.103376272218854_9.53702649947284_0.696242668561957 chr12 84762638 84763489 + 0.696242668561957 NA intron (NM_023409, intron 2 of 3) intron (NM_023409, intron 2 of 3) 10049 NM_023409 67963 Mm.282556 NM_023409 ENSMUSG00000021242 Npc2 2700012J19Rik|AA408070|AU045843|HE1 Niemann-Pick type C2 protein-coding common_peak1_12_47_0.343846432733421_5.75688571708787_0.696223193418884 chr2 3741704 3742103 + 0.696223193418884 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 28445 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_304_3026_-0.0510479219022226_11.5381489988764_0.69591638525931 chr17 24167690 24170277 + 0.69591638525931 NA intron (NM_009729, intron 1 of 2) intron (NM_009729, intron 1 of 2) 412 NR_037854 100039636 Mm.30155 NR_037854 Atp6v0c-ps2 Atp6l-ps2|Gm15487 ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 2 pseudo common_peak2_262_2531_-0.0556206701528801_11.2782513543519_0.695608886527316 chr19 10202663 10205413 + 0.695608886527316 NA promoter-TSS (NM_007999) promoter-TSS (NM_007999) -95 NM_001271614 14156 Mm.2952 NM_007999 ENSMUSG00000024742 Fen1 AW538437|FEN-1 flap structure specific endonuclease 1 protein-coding common_peak2_139_1061_0.082102286092093_10.0936191938502_0.695527412152126 chr3 103057626 103059360 + 0.695527412152126 NA TTS (NM_001310693) TTS (NM_001310693) 208 NM_010937 18176 Mm.400954 NM_010937 ENSMUSG00000027852 Nras AV095280|N-ras neuroblastoma ras oncogene protein-coding common_peak1_132_995_0.0838983805942792_10.0019511223652_0.69504464583758 chrY 90764162 90765652 + 0.69504464583758 NA Intergenic Intergenic -20535 NM_133362 170942 Mm.76062 NM_133362 ENSMUSG00000096768 Erdr1 edr erythroid differentiation regulator 1 protein-coding common_peak1_214_1987_-0.0632692844300156_10.9254673993473_0.694940028950499 chr7 81828063 81830164 + 0.694940028950499 NA exon (NM_146193, exon 1 of 8) exon (NM_146193, exon 1 of 8) 318 NM_146193 83962 Mm.439893 NM_146193 ENSMUSG00000025103 Btbd1 1190005H08Rik BTB (POZ) domain containing 1 protein-coding common_peak2_64_400_0.129456093877977_8.71218647339391_0.694832139941007 chr16 32087236 32088578 + 0.694832139941007 NA intron (NM_024464, intron 3 of 5) ID2|SINE|ID -8565 NM_177326 224105 Mm.234204 NM_177326 ENSMUSG00000022781 Pak2 5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182 p21 protein (Cdc42/Rac)-activated kinase 2 protein-coding common_peak1_102_720_0.0976924345359169_9.54270166650878_0.694652696143638 chr15 58872030 58873343 + 0.694652696143638 NA promoter-TSS (NM_026642) promoter-TSS (NM_026642) 37 NM_026642 68260 Mm.278805 NM_026642 ENSMUSG00000037085 Trmt12 4632406N01Rik|AI449275|Tyw2 tRNA methyltranferase 12 protein-coding common_peak2_102_720_0.0976924345359169_9.54270166650878_0.694652696143638 chr3 53863101 53864358 + 0.694652696143638 NA promoter-TSS (NM_026435) promoter-TSS (NM_026435) 78 NM_026435 67890 Mm.23067 NM_026435 ENSMUSG00000027746 Ufm1 1810045K17Rik|AI132708|AI463323|ENSMUSG00000074598|Gm10726 ubiquitin-fold modifier 1 protein-coding common_peak2_201_1684_0.0649276287225913_10.7509966904305_0.694222509471461 chr7 118112823 118117002 + 0.694222509471461 NA intron (NM_170669, intron 2 of 4) intron (NM_170669, intron 2 of 4) 1235 NM_170669 267019 Mm.288212 NM_170669 ENSMUSG00000008683 Rps15a A630031B11Rik ribosomal protein S15A protein-coding common_peak1_106_863_-0.095917082807695_9.70692896075962_0.694201186411233 chr15 80233897 80234817 + 0.694201186411233 NA intron (NM_178719, intron 1 of 5) CpG 277 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak2_62_462_-0.133259223308453_8.78823877160601_0.694190903823044 chr4 119874864 119876479 + 0.694190903823044 NA intron (NM_010657, intron 1 of 8) intron (NM_010657, intron 1 of 8) 60993 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak1_78_513_0.116474541919438_9.0638618201536_0.694035247078269-2 chr8 35375994 35377405 + 0.694035247078269 NA intron (NM_177741, intron 1 of 1) CpG 958 NM_177741 244416 Mm.247126 NM_177741 ENSMUSG00000046794 Ppp1r3b 6430576E21|AW821953|GL|PTG protein phosphatase 1, regulatory (inhibitor) subunit 3B protein-coding common_peak1_78_513_0.116474541919438_9.0638618201536_0.694035247078269 chr12 69724690 69725634 + 0.694035247078269 NA promoter-TSS (NM_145443) promoter-TSS (NM_145443) 200 NM_026536 68055 Mm.27844 NM_026536 ENSMUSG00000054894 Atp5s 1110015E18Rik|ATPW ATP synthase, H+ transporting, mitochondrial F0 complex, subunit S protein-coding common_peak2_143_1100_0.0799235418673661_10.1445605244981_0.693942361555537 chr18 90508988 90510904 + 0.693942361555537 NA promoter-TSS (NM_198295) promoter-TSS (NM_198295) -208 NM_198295 67988 Mm.268041 NM_198295 ENSMUSG00000024614 Tmx3 6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830 thioredoxin-related transmembrane protein 3 protein-coding common_peak1_22_145_-0.251363754786508_7.06414268148676_0.693633065012807-3 chr2 145196599 145197193 + 0.693633065012807 NA Intergenic Intergenic -45715 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein-coding common_peak1_22_145_-0.251363754786508_7.06414268148676_0.693633065012807 chr17 25773724 25774335 + 0.693633065012807 NA intron (NM_026238, intron 1 of 10) intron (NM_026238, intron 1 of 10) 253 NM_026238 67563 Mm.24201 NM_026238 ENSMUSG00000002280 Narfl 9030612I22Rik|AI504405|PRN nuclear prelamin A recognition factor-like protein-coding common_peak1_22_145_-0.251363754786508_7.06414268148676_0.693633065012807-2 chr18 77139971 77140363 + 0.693633065012807 NA intron (NM_001164167, intron 11 of 13) B3|SINE|B2 -45680 NM_153124 225742 Mm.365178 NM_013666 ENSMUSG00000025425 St8sia5 ST8SiaV|Siat8e ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 protein-coding unique_peak2_22_145_-0.251363754786508_7.06414268148676_0.693633065012807 chr5 115014497 115015624 + 0.693633065012807 NA intron (NM_029012, intron 1 of 10) intron (NM_029012, intron 1 of 10) 3536 NM_029012 74585 Mm.355894 NM_029012 ENSMUSG00000029550 Sppl3 4833416I09Rik|Psl4|Usmg3 signal peptide peptidase 3 protein-coding common_peak2_174_1552_-0.0712908129854473_10.5651967078946_0.693510697667138 chr4 133167859 133171349 + 0.693510697667138 NA intron (NM_153423, intron 1 of 8) intron (NM_153423, intron 1 of 8) -26051 NR_105984 102466215 NR_105984 ENSMUSG00000099202 Mir7017 Gm27945|mmu-mir-7017 microRNA 7017 ncRNA common_peak1_116_960_-0.0913146550126047_9.86273529326745_0.693404589221505 chr11 114668590 114670163 + 0.693404589221505 NA intron (NM_023372, intron 3 of 4) PB1D10|SINE|Alu 595 NM_001048058 67671 Mm.238817 NM_023372 ENSMUSG00000057322 Rpl38 0610025G13Rik|Rbt|Ts|Tss ribosomal protein L38 protein-coding common_peak1_402_3991_0.0427911144718802_11.9842915625732_0.693399602047837 chr4 138453569 138456978 + 0.693399602047837 NA exon (NM_025451, exon 1 of 2) exon (NM_025451, exon 1 of 2) 125 NM_025451 66259 Mm.41603 NM_025451 ENSMUSG00000046447 Camk2n1 1810006K23Rik|AI848599|AI891706 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding common_peak1_15_63_0.296253263125168_6.14812663156258_0.693339305075799-2 chr17 88403034 88403467 + 0.693339305075799 NA Intergenic Intergenic -37462 NM_180974 14236 Mm.112824 NM_180974 ENSMUSG00000034998 Foxn2 3230402J05Rik|6030465J18Rik|Fkh19|Foxn1|HTLF forkhead box N2 protein-coding common_peak1_15_63_0.296253263125168_6.14812663156258_0.693339305075799-3 chr4 101212647 101213038 + 0.693339305075799 NA intron (NM_146145, intron 1 of 24) B3A|SINE|B2 52440 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_15_63_0.296253263125168_6.14812663156258_0.693339305075799 chr13 43214961 43215368 + 0.693339305075799 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -43663 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding unique_peak2_15_63_0.296253263125168_6.14812663156258_0.693339305075799 chr2 176798620 176799212 + 0.693339305075799 NA intron (NM_001205057, intron 1 of 3) RMER17B|LTR|ERVK 316 NM_001205057 100039123 Mm.389409 NM_001205057 ENSMUSG00000078877 Gm14295 OTTMUSG00000016219 predicted gene 14295 protein-coding common_peak2_15_63_0.296253263125168_6.14812663156258_0.693339305075799 chr1 119913291 119913761 + 0.693339305075799 NA promoter-TSS (NM_175106) promoter-TSS (NM_175106) -358 NM_175106 66343 Mm.49942 NM_175106 ENSMUSG00000036975 Tmem177 2300008B03Rik transmembrane protein 177 protein-coding common_peak1_52_377_-0.14650065877796_8.48899209483209_0.693148180456708 chr10 30199896 30200454 + 0.693148180456708 NA intron (NM_001109747, intron 1 of 2) intron (NM_001109747, intron 1 of 2) 365 NM_001109747 66311 Mm.251779 NM_001109747 ENSMUSG00000075266 Cenpw 2610036L11Rik|Cug2 centromere protein W protein-coding common_peak1_54_322_0.145900663691991_8.40834068653992_0.692964153156888 chr12 33301659 33302456 + 0.692964153156888 NA promoter-TSS (NM_001033436) promoter-TSS (NM_001033436) -458 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_54_322_0.145900663691991_8.40834068653992_0.692964153156888-2 chr16 4003126 4003787 + 0.692964153156888 NA Intergenic Intergenic -1778 NM_177472 52864 Mm.29935 NM_177472 ENSMUSG00000039738 Slx4 AI256635|AI426760|Btbd12|D16Bwg1016e SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) protein-coding common_peak1_59_361_0.135422856700854_8.56755731543363_0.692851373226335 chr15 102670438 102671299 + 0.692851373226335 NA TTS (NR_030460) TTS (NR_030460) 179 NM_026468 67942 Mm.10314 NM_026468 ENSMUSG00000062683 Atp5g2 1810041M08Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) protein-coding common_peak2_59_361_0.135422856700854_8.56755731543363_0.692851373226335 chr17 53586623 53588251 + 0.692851373226335 NA intron (NM_001190846, intron 1 of 17) intron (NM_001190846, intron 1 of 17) 3311 NM_001190846 18519 Mm.255025 NM_020005 ENSMUSG00000000708 Kat2b A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF K(lysine) acetyltransferase 2B protein-coding unique_peak2_11_70_-0.362583962598943_5.96845513820521_0.692838550835943-2 chr15 76082497 76083090 + 0.692838550835943 NA Intergenic Intergenic -1847 NM_028364 67959 Mm.29965 NM_028364 ENSMUSG00000002524 Puf60 2410104I19Rik|2810454F19Rik|SIAHBP1 poly-U binding splicing factor 60 protein-coding unique_peak2_11_70_-0.362583962598943_5.96845513820521_0.692838550835943 chr11 23498150 23498608 + 0.692838550835943 NA promoter-TSS (NM_172391) promoter-TSS (NM_172391) -340 NM_172391 268390 Mm.13148 NM_172391 ENSMUSG00000020288 Ahsa2 - AHA1, activator of heat shock protein ATPase 2 protein-coding common_peak2_137_1169_-0.0830851830376158_10.150750222952_0.69221405729345 chr14 20733540 20735479 + 0.69221405729345 NA promoter-TSS (NM_010811) promoter-TSS (NM_010811) 53 NM_010811 17423 Mm.4084 NM_010811 ENSMUSG00000039308 Ndst2 Mndns|NDST-2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 protein-coding unique_peak2_20_91_0.253912687741485_6.65051829992776_0.691613651230254 chr5 121811796 121812589 + 0.691613651230254 NA intron (NM_009125, intron 23 of 24) intron (NM_009125, intron 23 of 24) 7081 NR_105998 102465624 NR_105998 ENSMUSG00000099063 Mir7031 Gm27859|mmu-mir-7031 microRNA 7031 ncRNA unique_peak2_20_91_0.253912687741485_6.65051829992776_0.691613651230254-2 chr7 80445283 80446217 + 0.691613651230254 NA Intergenic LTR88a|LTR|Gypsy? -40314 NM_001081454 18550 Mm.5241 NM_011046 ENSMUSG00000030530 Furin 9130404I01Rik|Fur|PACE|Pcsk3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding common_peak1_20_91_0.253912687741485_6.65051829992776_0.691613651230254 chr13 73467201 73467767 + 0.691613651230254 NA exon (NM_145376, exon 1 of 14) exon (NM_145376, exon 1 of 14) 101 NM_145376 210992 Mm.284649 NM_145376 ENSMUSG00000021608 Lpcat1 2900035H07Rik|Aytl2|BB137372|BC005662|C87117|LPCAT|rd11 lysophosphatidylcholine acyltransferase 1 protein-coding common_peak1_20_91_0.253912687741485_6.65051829992776_0.691613651230254-2 chr7 24134331 24134789 + 0.691613651230254 NA intron (NM_019941, intron 1 of 3) intron (NM_019941, intron 1 of 3) 397 NM_019941 56525 Mm.295595 NM_019941 ENSMUSG00000047603 Zfp235 0610030O19Rik|AI428448 zinc finger protein 235 protein-coding unique_peak2_17_110_-0.289730504477439_6.64955061411139_0.691613651230254 chr1 21308646 21309339 + 0.691613651230254 NA Intergenic B2_Mm1t|SINE|B2 -10680 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo common_peak2_65_488_-0.129758396104997_8.86881145689973_0.691555752980785 chr7 102316934 102318850 + 0.691555752980785 NA intron (NM_009287, intron 1 of 11) ORR1D2|LTR|ERVL-MaLR 50068 NM_009287 20866 Mm.645 NM_009287 ENSMUSG00000030987 Stim1 SIM stromal interaction molecule 1 protein-coding common_peak1_97_778_-0.101990969964628_9.55448403307935_0.691510832080009 chr11 85352096 85353663 + 0.691510832080009 NA promoter-TSS (NM_138681) promoter-TSS (NM_138681) -285 NM_001166642 192197 Mm.209989 NM_138681 ENSMUSG00000059439 Bcas3 1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira breast carcinoma amplified sequence 3 protein-coding common_peak2_126_939_0.0856937476090458_9.91936382036952_0.691327606553039 chr3 38483694 38485827 + 0.691327606553039 NA promoter-TSS (NM_001167883) promoter-TSS (NM_001167883) 56 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding common_peak1_171_1520_-0.0718526450978345_10.5348781151756_0.691085413929477 chr6 113697053 113698253 + 0.691085413929477 NA intron (NM_001033463, intron 1 of 7) CpG 154 NM_001033463 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak1_649_7229_0.0318524865590906_12.835706175118_0.690833608247083 chr13 52997696 53003334 + 0.690833608247083 NA Intergenic MTE2b|LTR|ERVL-MaLR -19476 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak2_24_159_-0.235912902750979_7.20397164351187_0.690818308281686 chr13 24631016 24632287 + 0.690818308281686 NA intron (NM_178658, intron 1 of 13) intron (NM_178658, intron 1 of 13) -6997 NM_001080381 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_24_159_-0.235912902750979_7.20397164351187_0.690818308281686-2 chr10 118406362 118406952 + 0.690818308281686 NA Intergenic B4|SINE|B4 -34389 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak1_24_159_-0.235912902750979_7.20397164351187_0.690818308281686 chr10 21991925 21992476 + 0.690818308281686 NA promoter-TSS (NM_001161849) promoter-TSS (NM_001161849) -23 NM_001161849 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_24_159_-0.235912902750979_7.20397164351187_0.690818308281686-3 chr12 100978951 100979371 + 0.690818308281686 NA intron (NM_026681, intron 4 of 29) intron (NM_026681, intron 4 of 29) 42607 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak1_45_320_-0.161356371842437_8.24575130120108_0.690799306044951 chr1 161744109 161744928 + 0.690799306044951 NA Intergenic B1_Mus1|SINE|Alu 43977 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_45_320_-0.161356371842437_8.24575130120108_0.690799306044951 chr6 145892870 145894685 + 0.690799306044951 NA Intergenic Intergenic -28357 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak2_82_639_-0.112422225719014_9.26571698202785_0.690790242760285 chr2 132246930 132248514 + 0.690790242760285 NA promoter-TSS (NM_027478) promoter-TSS (NM_027478) 66 NM_027478 70612 Mm.30116 NM_027478 ENSMUSG00000027341 Tmem230 5730494N06Rik|AA407821 transmembrane protein 230 protein-coding common_peak1_179_1605_-0.0698529175799703_10.6143297187273_0.690685424585271 chr5 105699412 105701591 + 0.690685424585271 NA promoter-TSS (NM_178701) promoter-TSS (NM_178701) -309 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_36_249_-0.186000633450677_7.87278396793675_0.690661936420842 chr3 57651187 57651894 + 0.690661936420842 NA intron (NM_175095, intron 1 of 4) CpG 144 NM_175095 52245 Mm.21901 NM_175095 ENSMUSG00000036513 Commd2 1190017G07Rik|AI047739|D3Ertd176e|HSPC042 COMM domain containing 2 protein-coding common_peak1_40_220_0.173540705673994_7.87467291222843_0.690661936420842 chr3 152346418 152347146 + 0.690661936420842 NA intron (NM_001076676, intron 1 of 23) CpG 304 NM_001076676 170822 Mm.258320 NM_133247 ENSMUSG00000025437 Usp33 9830169D19Rik|AA409780|Vdu1 ubiquitin specific peptidase 33 protein-coding common_peak2_36_249_-0.186000633450677_7.87278396793675_0.690661936420842-2 chr8 12875787 12877773 + 0.690661936420842 NA Intergenic Intergenic -39113 NM_178076 17207 Mm.334413 NM_178076 ENSMUSG00000031442 Mcf2l C130040G20Rik|Dbs|Ost|mKIAA0362 mcf.2 transforming sequence-like protein-coding common_peak2_36_249_-0.186000633450677_7.87278396793675_0.690661936420842 chr10 41713697 41715266 + 0.690661936420842 NA Intergenic (CCAA)n|Simple_repeat|Simple_repeat 95182 NM_001243075 103268 Mm.338605 NM_026643 ENSMUSG00000019813 Cep57l1 2410017P07Rik|4930484D11Rik|AI607327|cep57R centrosomal protein 57-like 1 protein-coding common_peak2_156_1363_-0.0761522946185238_10.3755517817149_0.690173483905182 chr16 32643310 32646549 + 0.690173483905182 NA 5' UTR (NM_001110147, exon 1 of 14) 5' UTR (NM_001110147, exon 1 of 14) 286 NM_016788 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding common_peak2_238_2255_-0.0584468383062156_11.1103279332457_0.690113798407105 chr11 52231160 52233113 + 0.690113798407105 NA intron (NM_011543, intron 1 of 5) CpG 141 NM_011543 21402 Mm.42944 NM_011543 ENSMUSG00000036309 Skp1a 15kDa|2610043E24Rik|2610206H23Rik|EMC19|OCP-II|OCP2|SKP1|Tceb1l|p19A|p19Skp1 S-phase kinase-associated protein 1A protein-coding common_peak1_47_270_0.158238737924581_8.16126841031616_0.68997214183749 chr18 84950707 84951617 + 0.68997214183749 NA exon (NM_025969, exon 1 of 6) exon (NM_025969, exon 1 of 6) 362 NM_025969 67105 Mm.250617 NM_025969 ENSMUSG00000024645 Timm21 1700034H14Rik|2700002I20Rik tranlocase of inner mitochondrial membrane 21 protein-coding common_peak2_47_270_0.158238737924581_8.16126841031616_0.68997214183749 chr12 17723794 17725388 + 0.68997214183749 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 33777 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak1_348_3559_-0.0465612285894927_11.774380911559_0.689841160794209 chr9 64795325 64799011 + 0.689841160794209 NA Intergenic B1_Mur1|SINE|Alu -13843 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding unique_peak2_26_173_-0.220735929009133_7.33257553134416_0.689827748118732 chr6 108444297 108445801 + 0.689827748118732 NA intron (NM_010585, intron 44 of 61) intron (NM_010585, intron 44 of 61) -44694 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_26_173_-0.220735929009133_7.33257553134416_0.689827748118732 chr6 49367190 49368286 + 0.689827748118732 NA promoter-TSS (NM_001172216) promoter-TSS (NM_001172216) -1 NM_001172216 231946 Mm.35199 NM_172727 ENSMUSG00000047115 Fam221a D330028D13Rik family with sequence similarity 221, member A protein-coding common_peak1_26_173_-0.220735929009133_7.33257553134416_0.689827748118732 chr5 99252463 99252928 + 0.689827748118732 NA intron (NM_181318, intron 1 of 13) CpG 232 NM_181318 320292 Mm.259074 NM_145839 ENSMUSG00000089809 Rasgef1b 4732452O09Rik|GPIgamma4|Gpig4 RasGEF domain family, member 1B protein-coding common_peak1_343_3497_-0.0467504701086359_11.7489393388673_0.689753973023488 chr11 108271232 108274696 + 0.689753973023488 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 70924 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_160_1404_-0.0743575017493097_10.4191756642336_0.689685007702108 chr14 54360468 54361694 + 0.689685007702108 NA intron (NM_026936, intron 1 of 9) CpG 240 NM_026936 69089 Mm.182340 NM_026936 ENSMUSG00000000959 Oxa1l 1810020M02Rik|AI894287 oxidase assembly 1-like protein-coding common_peak2_68_514_-0.125833301823786_8.94551197115869_0.689634107176175 chr6 99055887 99058434 + 0.689634107176175 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) -28862 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_73_472_0.120699589058372_8.94604616786858_0.689634107176175 chr6 88518990 88519609 + 0.689634107176175 NA promoter-TSS (NM_016906) promoter-TSS (NM_016906) -499 NM_016906 53421 Mm.28375 NM_016906 ENSMUSG00000030082 Sec61a1 AA408394|AA410007|Sec61a Sec61 alpha 1 subunit (S. cerevisiae) protein-coding common_peak1_369_3819_-0.0448553736470245_11.8769292360996_0.689497039164123 chr11 88067113 88069604 + 0.689497039164123 NA promoter-TSS (NM_016686) promoter-TSS (NM_016686) 79 NM_016686 22344 Mm.46628 NM_016686 ENSMUSG00000018377 Vezf1 AI848691|AW046909|db1 vascular endothelial zinc finger 1 protein-coding common_peak1_57_345_0.1406473980622_8.50495192666783_0.688823752137121 chr1 43127471 43128430 + 0.688823752137121 NA intron (NM_001289533, intron 5 of 5) intron (NM_001289533, intron 5 of 5) 29240 NM_133818 98404 Mm.28817 NM_133818 ENSMUSG00000010290 AI597479 - expressed sequence AI597479 protein-coding common_peak2_57_345_0.1406473980622_8.50495192666783_0.688823752137121 chr9 123835081 123837057 + 0.688823752137121 NA intron (NM_001110253, intron 4 of 17) intron (NM_001110253, intron 4 of 17) 15592 NM_148925 17281 Mm.252941 NM_148925 ENSMUSG00000025241 Fyco1 2810409M01Rik|Mem2|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding common_peak2_191_1580_0.0669907492927937_10.6601170270048_0.688656013010307 chr1 88679856 88686367 + 0.688656013010307 NA Intergenic Intergenic 19080 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_52_307_0.14895522474821_8.34126415306901_0.688587889717354 chr5 65724379 65725234 + 0.688587889717354 NA Intergenic Intergenic -26950 NM_001081321 71521 Mm.278974 NM_027818 ENSMUSG00000029202 Pds5a 9030416H16Rik|E230024D05Rik|mKIAA0648 PDS5 cohesin associated factor A protein-coding common_peak2_52_307_0.14895522474821_8.34126415306901_0.688587889717354 chr14 67908054 67909567 + 0.688587889717354 NA intron (NM_177780, intron 1 of 51) intron (NM_177780, intron 1 of 51) 24762 NM_177780 68813 Mm.258155 NM_177780 ENSMUSG00000044447 Dock5 1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc dedicator of cytokinesis 5 protein-coding common_peak2_50_361_-0.152175109955749_8.42375833210533_0.688396166998687-2 chr3 88834474 88835878 + 0.688396166998687 NA promoter-TSS (NM_027389) promoter-TSS (NM_027389) -55 NM_027389 76022 Mm.126870 NM_027389 ENSMUSG00000054199 Gon4l 1500041I23Rik|2610100B20Rik|3632445O20Rik|5430404N14Rik|AA387005 gon-4-like (C.elegans) protein-coding common_peak2_50_361_-0.152175109955749_8.42375833210533_0.688396166998687 chr17 7930455 7932412 + 0.688396166998687 NA exon (NM_145968, exon 8 of 10) exon (NM_145968, exon 8 of 10) 5433 NM_145968 72536 Mm.119680 NM_145968 ENSMUSG00000033450 Tagap 2610315E15Rik T cell activation Rho GTPase activating protein protein-coding common_peak1_32_218_-0.197467111940294_7.67605350363103_0.688353997349317 chr4 151044812 151045396 + 0.688353997349317 NA promoter-TSS (NM_001289878) promoter-TSS (NM_001289878) -439 NM_001289878 18628 Mm.121361 NM_011067 ENSMUSG00000028957 Per3 2810049O06Rik|mPer3 period circadian clock 3 protein-coding common_peak2_76_497_0.116719608704985_9.01836173642057_0.688320628646291 chr6 128822477 128824235 + 0.688320628646291 NA intron (NM_030599, intron 1 of 5) MIRb|SINE|MIR 2959 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak2_38_206_0.179456492108535_7.78321520355359_0.688208463912374 chr11 107443208 107444602 + 0.688208463912374 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 26815 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_114_940_-0.0914845217567066_9.83230865185018_0.688098775789425 chr2 154731903 154735045 + 0.688098775789425 NA Intergenic B4|SINE|B4 -57636 NM_001139512 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding common_peak1_120_883_0.0886642852440165_9.83223470201344_0.688098775789425 chr11 55469590 55471220 + 0.688098775789425 NA intron (NM_013716, intron 1 of 11) intron (NM_013716, intron 1 of 11) 653 NM_013716 27041 Mm.39631 NM_013716 ENSMUSG00000018583 G3bp1 AI849976|B430204O07|C87777|G3bp|mKIAA4115 GTPase activating protein (SH3 domain) binding protein 1 protein-coding common_peak1_28_188_-0.213579109708505_7.45545286936682_0.688015773634161 chr16 17012071 17012655 + 0.688015773634161 NA intron (NM_011949, intron 1 of 8) B1_Mus1|SINE|Alu 28981 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak1_213_1975_-0.0627845010425485_10.9169749810634_0.687904116077403 chr18 76240791 76242795 + 0.687904116077403 NA promoter-TSS (NM_010754) promoter-TSS (NM_010754) 92 NM_010754 17126 Mm.152699 NM_010754 ENSMUSG00000024563 Smad2 7120426M23Rik|Madh2|Madr2|Smad-2|mMad2 SMAD family member 2 protein-coding common_peak1_225_1939_0.0602908722842681_10.9519863732166_0.687780560889146 chr10 108117186 108120038 + 0.687780560889146 NA Intergenic Intergenic -43788 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak2_142_1219_-0.0804750858678212_10.2124278895163_0.687697443303212-2 chr8 72570297 72572150 + 0.687697443303212 NA promoter-TSS (NM_144534) promoter-TSS (NM_144534) -175 NM_172396 66818 Mm.22565 NM_172396 ENSMUSG00000044600 Smim7 9130011J15Rik small integral membrane protein 7 protein-coding common_peak2_142_1219_-0.0804750858678212_10.2124278895163_0.687697443303212 chr17 88699337 88702684 + 0.687697443303212 NA intron (NM_023630, intron 6 of 8) intron (NM_023630, intron 6 of 8) 32350 NM_023630 71828 Mm.61330 NM_023630 ENSMUSG00000024154 Gtf2a1l 1700011N16Rik|Alf|Gtf2a1lf general transcription factor IIA, 1-like protein-coding unique_peak2_30_203_-0.205743137237189_7.5695537733529_0.68762547601084 chr7 90348296 90349764 + 0.68762547601084 NA intron (NM_001289583, intron 2 of 19) intron (NM_001289583, intron 2 of 19) -37951 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_30_203_-0.205743137237189_7.5695537733529_0.68762547601084 chr6 99026894 99027611 + 0.68762547601084 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) 1046 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_65_408_0.127975225905487_8.73994464589449_0.687457576427119 chr15 60105422 60106678 + 0.687457576427119 NA Intergenic B4A|SINE|B4 -89432 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_63_470_-0.130105364114904_8.81453056755533_0.687196726863968 chr17 28621614 28622682 + 0.687196726863968 NA intron (NM_016795, intron 1 of 15) CpG-6184 306 NM_016795 20815 Mm.15252 NM_016795 ENSMUSG00000004865 Srpk1 AU017960 serine/arginine-rich protein specific kinase 1 protein-coding common_peak1_88_598_0.106606175975402_9.27971528077649_0.687025669245288 chr19 53310635 53312010 + 0.687025669245288 NA intron (NM_001008542, intron 1 of 5) CpG 816 NM_001008542 17859 Mm.2154 NM_010847 ENSMUSG00000025025 Mxi1 ENSMUSG00000067085|Gm10197|Mad2|bHLHc11 MAX interactor 1, dimerization protein protein-coding common_peak1_121_1009_-0.0890078154058287_9.93563566993624_0.686943145162552 chr3 94974543 94975572 + 0.686943145162552 NA 5' UTR (NM_175356, exon 1 of 11) 5' UTR (NM_175356, exon 1 of 11) 326 NM_001293716 107650 Mm.217222 NM_175356 ENSMUSG00000038861 Pi4kb ESTM41|PI4K-beta|PI4Kbeta|Pik4cb phosphatidylinositol 4-kinase, catalytic, beta polypeptide protein-coding common_peak1_14_90_-0.325750518787348_6.34491938080502_0.686734409380264 chr17 27404612 27404998 + 0.686734409380264 NA Intergenic Intergenic 46708 NR_106077 102466228 NR_106077 ENSMUSG00000106215 Mir7218 mmu-mir-7218 microRNA 7218 ncRNA common_peak1_14_90_-0.325750518787348_6.34491938080502_0.686734409380264-2 chr3 14533925 14534276 + 0.686734409380264 NA intron (NM_028915, intron 1 of 18) intron (NM_028915, intron 1 of 18) 312 NM_028915 71710 Mm.257449 NM_028915 ENSMUSG00000027550 Lrrcc1 1200008A14Rik|4932441F23Rik|AI195358|AI447421 leucine rich repeat and coiled-coil domain containing 1 protein-coding unique_peak2_14_90_-0.325750518787348_6.34491938080502_0.686734409380264-2 chr17 64617942 64618562 + 0.686734409380264 NA intron (NM_008549, intron 1 of 21) B3A|SINE|B2 16603 NM_008549 17158 Mm.2433 NM_008549 ENSMUSG00000024085 Man2a1 Mana-2|Mana2|Map-2 mannosidase 2, alpha 1 protein-coding unique_peak2_14_90_-0.325750518787348_6.34491938080502_0.686734409380264 chr12 93226542 93227486 + 0.686734409380264 NA Intergenic Intergenic 217809 NR_126436 75295 Mm.243878 NR_126436 4930559C10Rik - RIKEN cDNA 4930559C10 gene ncRNA common_peak1_161_1415_-0.0746511559037621_10.4302799721311_0.686586365772683 chr7 110060544 110061457 + 0.686586365772683 NA promoter-TSS (NM_009281) promoter-TSS (NM_009281) -702 NM_009281 20841 Mm.10815 NM_009281 ENSMUSG00000061079 Zfp143 AA959806|AU015869|D7Ertd805e|KRAB14|SBF|Staf|Zfp79|Zfp80-rs1|Znf143|pHZ-1 zinc finger protein 143 protein-coding common_peak1_138_1052_0.0816950597668846_10.0811372509092_0.686453826671322 chr5 121451584 121453188 + 0.686453826671322 NA promoter-TSS (NM_029912) promoter-TSS (NM_029912) 88 NM_026129 67397 Mm.154570 NM_026129 ENSMUSG00000029616 Erp29 1200015M03Rik|2810446M09Rik|AW209030|Erp28|Erp31|PDI-Db endoplasmic reticulum protein 29 protein-coding common_peak2_149_1158_0.0780971684695526_10.2177134352412_0.686397943221748 chr4 132421509 132423105 + 0.686397943221748 NA intron (NM_001161797, intron 1 of 12) CpG 139 NM_001161797 100169 Mm.158361 NM_175306 ENSMUSG00000066043 Phactr4 3110001B12Rik|AI527228|AW495572|C330013F19Rik|N28169|mKIAA4120 phosphatase and actin regulator 4 protein-coding common_peak2_95_759_-0.102855517866139_9.51842784939788_0.686110975654757 chr11 119942140 119943922 + 0.686110975654757 NA promoter-TSS (NM_001037754) promoter-TSS (NM_001037754) -61 NM_001037754 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding common_peak2_248_2189_0.0569252308330963_11.1251777699051_0.686106581905932 chr1 52815300 52818848 + 0.686106581905932 NA intron (NM_008384, intron 1 of 5) intron (NM_008384, intron 1 of 5) 614 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding common_peak1_248_2189_0.0569252308330963_11.1251777699051_0.686106581905932 chr10 7680235 7682049 + 0.686106581905932 NA promoter-TSS (NR_033219) promoter-TSS (NR_033219) 16 NR_033219 407824 Mm.393120 NR_033219 BC020402 - cDNA sequence BC020402 ncRNA common_peak1_22_103_0.238021085952418_6.8194502611173_0.685864620089758-2 chr8 36247725 36248363 + 0.685864620089758 NA intron (NM_001081150, intron 1 of 11) intron (NM_001081150, intron 1 of 11) 1472 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding unique_peak2_19_123_-0.263062082756099_6.82266526900883_0.685864620089758 chr18 20946074 20947108 + 0.685864620089758 NA intron (NM_026301, intron 1 of 5) intron (NM_026301, intron 1 of 5) 1966 NM_026301 67664 Mm.45980 NM_026301 ENSMUSG00000033107 Rnf125 4930553F04Rik ring finger protein 125 protein-coding unique_peak2_22_103_0.238021085952418_6.8194502611173_0.685864620089758 chr1 160776674 160777587 + 0.685864620089758 NA intron (NM_013862, intron 1 of 20) L1VL2|LINE|L1 15808 NM_013862 29809 Mm.25833 NM_013862 ENSMUSG00000026721 Rabgap1l 5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471 RAB GTPase activating protein 1-like protein-coding common_peak1_19_123_-0.263062082756099_6.82266526900883_0.685864620089758 chr12 98215457 98215887 + 0.685864620089758 NA intron (NM_008079, intron 12 of 16) intron (NM_008079, intron 12 of 16) 43787 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding unique_peak2_22_103_0.238021085952418_6.8194502611173_0.685864620089758-2 chr7 140983030 140983810 + 0.685864620089758 NA Intergenic Intergenic 15344 NM_001112715 68713 Mm.175661 NM_026820 ENSMUSG00000025491 Ifitm1 1110036C17Rik|DSPA2a|Mil-2|Mil2 interferon induced transmembrane protein 1 protein-coding common_peak2_22_103_0.238021085952418_6.8194502611173_0.685864620089758 chr10 12823125 12823813 + 0.685864620089758 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 38266 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak2_22_103_0.238021085952418_6.8194502611173_0.685864620089758-3 chr9 104337347 104338378 + 0.685864620089758 NA promoter-TSS (NM_207668) promoter-TSS (NM_207668) -140 NM_207668 56318 Mm.19941 NM_019807 ENSMUSG00000032561 Acpp 5'-NT|A030005E02Rik|FRAP|Lap|PAP|Ppal acid phosphatase, prostate protein-coding common_peak1_19_123_-0.263062082756099_6.82266526900883_0.685864620089758-3 chr19 29453634 29454057 + 0.685864620089758 NA intron (NM_021396, intron 4 of 5) intron (NM_021396, intron 4 of 5) 42926 NM_021396 58205 Mm.116737 NM_021396 ENSMUSG00000016498 Pdcd1lg2 B7-DC|Btdc|F730015O22Rik|PD-L2 programmed cell death 1 ligand 2 protein-coding common_peak1_22_103_0.238021085952418_6.8194502611173_0.685864620089758 chr6 140207004 140207412 + 0.685864620089758 NA Intergenic Intergenic 165683 NM_007605 12344 Mm.12817 NM_007605 ENSMUSG00000041791 Capza3 510-4|Cappa3|Gsg3|Tex8|repro32 capping protein (actin filament) muscle Z-line, alpha 3 protein-coding common_peak1_19_123_-0.263062082756099_6.82266526900883_0.685864620089758-2 chr15 77945941 77946431 + 0.685864620089758 NA intron (NM_001017983, intron 7 of 8) intron (NM_001017983, intron 7 of 8) 10536 NM_001168260 239554 Mm.295605 NM_001017983 ENSMUSG00000016552 Foxred2 A430097D04Rik|D15Bwg0759e|Gm304 FAD-dependent oxidoreductase domain containing 2 protein-coding common_peak1_19_123_-0.263062082756099_6.82266526900883_0.685864620089758-4 chr5 124019550 124020056 + 0.685864620089758 NA intron (NM_177876, intron 1 of 3) intron (NM_177876, intron 1 of 3) 12457 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_77_594_-0.117190097401089_9.15815080949476_0.685839119717004 chr11 108267815 108269100 + 0.685839119717004 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 75431 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_139_1188_-0.0808626628494107_10.175101668321_0.685782904682507 chr6 108670482 108672270 + 0.685782904682507 NA Intergenic PB1D7|SINE|Alu -10442 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak2_45_256_0.159448566085986_8.08534883223687_0.685545656951215 chr1 43550135 43551579 + 0.685545656951215 NA intron (NM_010879, intron 3 of 4) intron (NM_010879, intron 3 of 4) 105106 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak2_108_882_-0.0945273921188292_9.73900593158905_0.685455881889148 chr17 6006380 6009472 + 0.685455881889148 NA intron (NM_001290698, intron 1 of 19) intron (NM_001290698, intron 1 of 19) 346 NM_001290698 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding common_peak1_236_2232_-0.058533928555871_11.0955005715445_0.68533109054686 chr11 52231415 52233184 + 0.68533109054686 NA intron (NM_011543, intron 1 of 5) CpG 304 NM_011543 21402 Mm.42944 NM_011543 ENSMUSG00000036309 Skp1a 15kDa|2610043E24Rik|2610206H23Rik|EMC19|OCP-II|OCP2|SKP1|Tceb1l|p19A|p19Skp1 S-phase kinase-associated protein 1A protein-coding common_peak2_89_703_-0.106640669886309_9.40611128369414_0.685321730429992 chr18 4375109 4376494 + 0.685321730429992 NA intron (NM_026157, intron 1 of 8) CpG 209 NM_026157 67440 Mm.49826 NM_026157 ENSMUSG00000024234 Mtpap 0610027A18Rik|AW551379|Papd1 mitochondrial poly(A) polymerase protein-coding common_peak1_80_621_-0.114428687137725_9.22355642656174_0.685308351718826 chr7 127992733 127994409 + 0.685308351718826 NA exon (NM_023258, exon 1 of 3) exon (NM_023258, exon 1 of 3) 296 NM_023258 66824 Mm.24163 NM_023258 ENSMUSG00000030793 Pycard 9130417A21Rik|Asc|CARD5|TMS-1|TNS1|masc PYD and CARD domain containing protein-coding unique_peak2_48_344_-0.153576314754847_8.35366439428811_0.685029089067761 chr10 68472028 68473566 + 0.685029089067761 NA intron (NM_028491, intron 5 of 7) intron (NM_028491, intron 5 of 7) 69078 NM_028491 73287 Mm.141830 NM_028491 ENSMUSG00000019945 1700040L02Rik - RIKEN cDNA 1700040L02 gene protein-coding common_peak1_114_828_0.0913380994760793_9.74089734123379_0.685006368786537 chr4 138216108 138217016 + 0.685006368786537 NA promoter-TSS (NM_001285481) promoter-TSS (NM_001285481) -50 NM_001122896 15441 Mm.348429 NM_010470 ENSMUSG00000028759 Hp1bp3 Hp1bp74 heterochromatin protein 1, binding protein 3 protein-coding common_peak2_66_496_-0.126558341412563_8.89382287085601_0.684981282753726 chr18 38600490 38602304 + 0.684981282753726 NA promoter-TSS (NM_011898) promoter-TSS (NM_011898) -129 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty homolog 4 (Drosophila) protein-coding common_peak2_60_369_0.13313799053066_8.59795045578164_0.684755937892679 chr8 76899934 76902284 + 0.684755937892679 NA promoter-TSS (NR_028579) promoter-TSS (NR_028579) -936 NR_028579 100039211 Mm.367571 NR_028579 ENSMUSG00000074235 Gm10649 ENSMUSG00000074235 predicted gene 10649 ncRNA common_peak2_36_193_0.179870809024282_7.68984824669927_0.684597290180256 chr4 21755292 21756484 + 0.684597290180256 NA intron (NM_001290420, intron 11 of 11) ORR1B2|LTR|ERVL-MaLR 11323 NM_029840 77032 Mm.87238 NM_029840 ENSMUSG00000028251 Tstd3 2610029I01Rik thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 protein-coding common_peak1_36_193_0.179870809024282_7.68984824669927_0.684597290180256 chr13 117195550 117196200 + 0.684597290180256 NA Intergenic Intergenic -24698 NM_010330 13723 Mm.274926 NM_010330 ENSMUSG00000021728 Emb AL022799|Gp70 embigin protein-coding common_peak2_36_193_0.179870809024282_7.68984824669927_0.684597290180256-2 chr4 116824338 116825219 + 0.684597290180256 NA Intergenic CpG -3270 NM_146256 242642 Mm.279897 NM_146256 ENSMUSG00000043155 Hpdl A830048M07Rik|BC034099|Gloxd1 4-hydroxyphenylpyruvate dioxygenase-like protein-coding common_peak2_53_385_-0.143637159242129_8.52063845764702_0.684593704157375 chr14 118705394 118706809 + 0.684593704157375 NA exon (NM_001033336, exon 1 of 31) exon (NM_001033336, exon 1 of 31) 118 NM_001163676 239273 Mm.40537 NM_001033336 ENSMUSG00000032849 Abcc4 ABCC4-N1|D630049P08Rik|MOATB|MRP4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein-coding common_peak1_101_711_0.0985496573474141_9.52500825964011_0.684541789152701 chr5 92434423 92435903 + 0.684541789152701 NA promoter-TSS (NM_183392) promoter-TSS (NM_183392) 36 NM_183392 269113 Mm.275289 NM_183392 ENSMUSG00000034826 Nup54 3110079L04Rik|54kDa nucleoporin 54 protein-coding common_peak2_58_428_-0.13930743245772_8.67518012127069_0.68449392363075 chr17 55931382 55932860 + 0.68449392363075 NA Intergenic Intergenic 13138 NM_146249 240120 Mm.441018 NM_146249 ENSMUSG00000062101 Zfp119b - zinc finger protein 119b protein-coding common_peak2_41_288_-0.170838727515823_8.08950631874277_0.684133062564889 chr3 98347625 98349005 + 0.684133062564889 NA Intergenic MLT1D|LTR|ERVL-MaLR -8346 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding common_peak2_197_1643_0.065072191318837_10.7155306793411_0.683896039303258 chr16 33250503 33252563 + 0.683896039303258 NA promoter-TSS (NM_080557) promoter-TSS (NM_080557) 77 NM_080557 69150 Mm.28196 NM_080557 ENSMUSG00000022808 Snx4 1810036H14Rik|AI037066 sorting nexin 4 protein-coding common_peak2_198_1810_-0.0655890371027503_10.7897763123988_0.683782996880091 chr8 33599419 33603765 + 0.683782996880091 NA intron (NM_017374, intron 1 of 6) intron (NM_017374, intron 1 of 6) 1971 NM_017374 19053 Mm.29301 NM_017374 ENSMUSG00000009630 Ppp2cb AI115466|D8Ertd766e|PP2Ac protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform protein-coding common_peak1_34_179_0.189592618193859_7.5866494054266_0.683592235331451 chr2 71055050 71055629 + 0.683592235331451 NA promoter-TSS (NM_001165982) promoter-TSS (NM_001165982) 267 NM_145524 228019 Mm.490343 NM_145524 ENSMUSG00000041975 Mettl8 BC004636|Tip methyltransferase like 8 protein-coding common_peak1_34_179_0.189592618193859_7.5866494054266_0.683592235331451-2 chr8 13660699 13661257 + 0.683592235331451 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 16609 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_69_522_-0.122609110537052_8.96936258097842_0.683425184146853 chr6 54040737 54042962 + 0.683425184146853 NA intron (NM_001163640, intron 1 of 12) intron (NM_001163640, intron 1 of 12) 1917 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak2_245_2157_0.05671094291705_11.1038346209465_0.683060948838988 chr2 78976564 78982879 + 0.683060948838988 NA Intergenic Intergenic 110674 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_24_115_0.228034197008812_6.97199809363198_0.682997994597616 chr13 44800354 44800924 + 0.682997994597616 NA intron (NM_001205044, intron 2 of 18) CYRA11_Mm|Unknown|Y-chromosome 69368 NM_001205043 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding unique_peak2_24_115_0.228034197008812_6.97199809363198_0.682997994597616 chr12 73616216 73617075 + 0.682997994597616 NA intron (NM_001313977, intron 2 of 14) L2b|LINE|L2 31849 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak2_139_1062_0.0807444553651404_10.0942981092137_0.6829265832211 chr15 86342142 86346589 + 0.6829265832211 NA intron (NM_145476, intron 8 of 12) intron (NM_145476, intron 8 of 12) 129906 NM_145476 223754 Mm.28904 NM_145476 ENSMUSG00000051864 Tbc1d22a BC023106|D15Ertd781e TBC1 domain family, member 22a protein-coding common_peak2_178_1594_-0.0697961232294624_10.6044426470375_0.682921528381848 chr6 130302704 130309566 + 0.682921528381848 NA intron (NM_024470, intron 2 of 7) intron (NM_024470, intron 2 of 7) 297 NR_033451 16631 Mm.441781 NM_010647 ENSMUSG00000030178 Klra13-ps Klra13|Ly49M killer cell lectin-like receptor subfamily A, member 13, pseudogene pseudo common_peak2_112_920_-0.0915378479189357_9.80128842213187_0.682804448334575 chr10 80601902 80604032 + 0.682804448334575 NA promoter-TSS (NM_001100606) promoter-TSS (NM_001100606) 85 NM_019575 56214 Mm.273170 NM_019575 ENSMUSG00000078441 Scamp4 2410022D05Rik|AI448940|AU022392|AW742369|Sc4 secretory carrier membrane protein 4 protein-coding common_peak1_63_392_0.131092383239274_8.68393169387824_0.68262658477641 chr7 28049523 28050135 + 0.68262658477641 NA intron (NM_011874, intron 1 of 10) intron (NM_011874, intron 1 of 10) 263 NM_011874 23996 Mm.29582 NM_011874 ENSMUSG00000030603 Psmc4 CIP21|MIP224 proteasome (prosome, macropain) 26S subunit, ATPase, 4 protein-coding common_peak1_95_659_0.100677876218992_9.41666115235531_0.682509315922496 chr1 181230166 181231851 + 0.682509315922496 NA Intergenic Intergenic -19030 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak2_26_127_0.222207566839595_7.1111037834198_0.682228703758087 chr11 33919333 33920495 + 0.682228703758087 NA intron (NM_001190886, intron 1 of 7) MIRb|SINE|MIR -43099 NM_031169 16533 Mm.6206 NM_031169 ENSMUSG00000020155 Kcnmb1 BKbeta1 potassium large conductance calcium-activated channel, subfamily M, beta member 1 protein-coding unique_peak2_26_127_0.222207566839595_7.1111037834198_0.682228703758087 chr7 135654841 135655929 + 0.682228703758087 NA intron (NM_001316681, intron 3 of 17) intron (NM_001316681, intron 3 of 17) -3071 NR_015548 67765 Mm.445272 NR_015548 ENSMUSG00000097471 5830432E09Rik - RIKEN cDNA 5830432E09 gene ncRNA common_peak1_26_127_0.222207566839595_7.1111037834198_0.682228703758087-2 chr12 84617083 84617514 + 0.682228703758087 NA exon (NM_008992, exon 1 of 19) exon (NM_008992, exon 1 of 19) 168 NM_008992 19300 Mm.229109 NM_008992 ENSMUSG00000021240 Abcd4 P69r|P70R|Pxmp1l ATP-binding cassette, sub-family D (ALD), member 4 protein-coding common_peak1_26_127_0.222207566839595_7.1111037834198_0.682228703758087 chr10 25359279 25359685 + 0.682228703758087 NA promoter-TSS (NM_001199265) promoter-TSS (NM_001199265) -316 NM_001199265 13822 Mm.306026 NM_013511 ENSMUSG00000019978 Epb41l2 4.1G|AW555191|D10Ertd398e|Epb4.1l2|NBL2 erythrocyte membrane protein band 4.1 like 2 protein-coding common_peak1_26_127_0.222207566839595_7.1111037834198_0.682228703758087-3 chr5 122316707 122317376 + 0.682228703758087 NA intron (NM_177242, intron 3 of 5) intron (NM_177242, intron 3 of 5) 32643 NM_177242 320717 Mm.489670 NM_177242 ENSMUSG00000038582 Pptc7 9130017A15Rik|AA672638|AI848390|TA-PP2C PTC7 protein phosphatase homolog protein-coding common_peak2_26_127_0.222207566839595_7.1111037834198_0.682228703758087-3 chr8 14961672 14962486 + 0.682228703758087 NA intron (NM_172751, intron 16 of 28) intron (NM_172751, intron 16 of 28) -48946 NM_029116 74901 Mm.46675 NM_029116 ENSMUSG00000055675 Kbtbd11 2900016B01Rik|4930465M17Rik|mKIAA0711 kelch repeat and BTB (POZ) domain containing 11 protein-coding common_peak2_26_127_0.222207566839595_7.1111037834198_0.682228703758087-2 chr12 102698304 102699306 + 0.682228703758087 NA intron (NM_172584, intron 1 of 9) intron (NM_172584, intron 1 of 9) 6064 NM_172584 217837 Mm.482192 NM_172584 ENSMUSG00000057963 Itpk1 BC031182 inositol 1,3,4-triphosphate 5/6 kinase protein-coding common_peak1_278_2524_0.0528835645143548_11.3285094547837_0.682104331809042 chr3 144718644 144720629 + 0.682104331809042 NA intron (NM_001282037, intron 1 of 10) intron (NM_001282037, intron 1 of 10) 699 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_108_774_0.0936897353680362_9.64489736784562_0.682090619413787 chr9 48813825 48815981 + 0.682090619413787 NA intron (NM_001033324, intron 2 of 6) intron (NM_001033324, intron 2 of 6) 21042 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding common_peak1_17_74_0.275866671376787_6.36675202618427_0.682042446238145-2 chrX 12006101 12006520 + 0.682042446238145 NA Intergenic CpG 74243 NM_175045 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_17_74_0.275866671376787_6.36675202618427_0.682042446238145 chr4 59295048 59295429 + 0.682042446238145 NA Intergenic Intergenic 35187 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_155_1352_-0.0757780519959628_10.3640570979786_0.681986079354048 chr2 117341309 117343467 + 0.681986079354048 NA intron (NM_011246, intron 1 of 16) intron (NM_011246, intron 1 of 16) 489 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_92_633_0.102477690748183_9.3595778755135_0.681866047704918 chr1 161706171 161707849 + 0.681866047704918 NA Intergenic MLTR73|LTR|ERV1 81485 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_92_633_0.102477690748183_9.3595778755135_0.681866047704918 chr1 87326333 87328075 + 0.681866047704918 NA intron (NM_146112, intron 1 of 28) CpG 206 NM_001110212 227331 Mm.23065 NM_146112 ENSMUSG00000048000 Gigyf2 2610016F01Rik|A830080H02Rik|AI852361|AW259676|BC006835|Tnrc15|mKIAA0642 GRB10 interacting GYF protein 2 protein-coding common_peak2_143_1101_0.0786137868605774_10.1452154020014_0.681590067676861 chr6 25808232 25810032 + 0.681590067676861 NA promoter-TSS (NM_133931) promoter-TSS (NM_133931) 94 NM_133931 101185 Mm.274589 NM_133931 ENSMUSG00000029676 Pot1a 1500031H18Rik|AI851169|Pot1 protection of telomeres 1A protein-coding common_peak2_89_607_0.104863435307402_9.30035923109729_0.681513246039933 chr11 59847443 59848932 + 0.681513246039933 NA exon (NM_134029, exon 1 of 5) exon (NM_134029, exon 1 of 5) 114 NM_134029 103850 Mm.41761 NM_134029 ENSMUSG00000032615 Nt5m 2010013E09Rik|AI846937|dNT-2 5',3'-nucleotidase, mitochondrial protein-coding unique_peak2_32_166_0.193615655186828_7.48051212006747_0.681501054617532 chr5 100581959 100583126 + 0.681501054617532 NA Intergenic B3|SINE|B2 -10337 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding unique_peak2_32_166_0.193615655186828_7.48051212006747_0.681501054617532-2 chrX 136996708 136998015 + 0.681501054617532 NA TTS (NM_001035509) TTS (NM_001035509) 4206 NM_001035509 66995 Mm.440155 NM_025893 ENSMUSG00000031428 Zcchc18 1500031H04Rik|Sizn2 zinc finger, CCHC domain containing 18 protein-coding common_peak1_39_272_-0.17501060210272_8.00525183986849_0.681465067944993-2 chr7 127210006 127210837 + 0.681465067944993 NA Intergenic Intergenic -1187 NM_016754 17907 Mm.14526 NM_016754 ENSMUSG00000030672 Mylpf 2410014J02Rik|MLC-2|Mlc2 myosin light chain, phosphorylatable, fast skeletal muscle protein-coding common_peak1_39_272_-0.17501060210272_8.00525183986849_0.681465067944993 chr10 117861211 117861808 + 0.681465067944993 NA Intergenic Intergenic -15535 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak1_215_1833_0.0612665768036091_10.8714112119969_0.681284607624447 chr17 71526250 71527616 + 0.681284607624447 NA promoter-TSS (NM_023294) promoter-TSS (NM_023294) -76 NM_023294 67052 Mm.225956 NM_023294 ENSMUSG00000024056 Ndc80 2610020P18Rik|AV139730|HEC|HEC1|Kntc2 NDC80 kinetochore complex component protein-coding common_peak2_83_556_0.109165748831179_9.17611639175562_0.681180464986072 chr7 66165421 66169693 + 0.681180464986072 NA intron (NM_001081163, intron 2 of 2) intron (NM_001081163, intron 2 of 2) 58042 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_329_3325_-0.0475346075617118_11.6758051495064_0.681013120358373 chr11 50376423 50379268 + 0.681013120358373 NA intron (NM_021510, intron 1 of 13) CpG 126 NM_021510 59013 Mm.21740 NM_021510 ENSMUSG00000007850 Hnrnph1 AI642080|E430005G16Rik|Hnrnph|Hnrph1 heterogeneous nuclear ribonucleoprotein H1 protein-coding common_peak1_105_747_0.0954596167418309_9.59462426825855_0.680898625916585 chr3 98013444 98014518 + 0.680898625916585 NA intron (NM_010928, intron 1 of 33) CpG 443 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak2_56_410_-0.13849586413151_8.61374665161593_0.680832428924014 chr10 85828766 85830075 + 0.680832428924014 NA Intergenic CpG -42411 NM_133993 103136 Mm.18834 NM_133993 ENSMUSG00000001785 Pwp1 2310058A11Rik|2610205J09Rik|AI098170|AL022879|AV083409|AW550690 PWP1 homolog, endonuclein protein-coding common_peak2_46_328_-0.158812686309224_8.28253743058063_0.680779676650451 chr2 35452938 35454706 + 0.680779676650451 NA intron (NM_001308299, intron 1 of 7) intron (NM_001308299, intron 1 of 7) 7627 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak2_115_838_0.0893609364454573_9.75720746866255_0.680568397352371 chr13 32801301 32803288 + 0.680568397352371 NA exon (NM_030215, exon 1 of 7) exon (NM_030215, exon 1 of 7) 264 NM_030215 78903 Mm.286680 NM_030215 ENSMUSG00000021400 Wrnip1 4833444L21Rik|WHIP|Wrnip Werner helicase interacting protein 1 protein-coding common_peak1_28_140_0.209111962113774_7.24410733345568_0.680506758450318-4 chr8 36101157 36101883 + 0.680506758450318 NA intron (NM_172911, intron 2 of 5) intron (NM_172911, intron 2 of 5) 6692 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding unique_peak2_28_140_0.209111962113774_7.24410733345568_0.680506758450318 chr6 117914007 117915385 + 0.680506758450318 NA intron (NM_001166428, intron 1 of 3) RSINE1|SINE|B4 -2598 NM_001166427 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_28_140_0.209111962113774_7.24410733345568_0.680506758450318 chr12 79089109 79089738 + 0.680506758450318 NA non-coding (NR_110486, exon 3 of 3) non-coding (NR_110486, exon 3 of 3) 247 NM_029988 110417 Mm.268317 NM_029988 ENSMUSG00000021120 Pigh 2210416H01Rik|A930028P05Rik phosphatidylinositol glycan anchor biosynthesis, class H protein-coding common_peak1_28_140_0.209111962113774_7.24410733345568_0.680506758450318-2 chr13 12650049 12650554 + 0.680506758450318 NA promoter-TSS (NR_003568) promoter-TSS (NR_003568) 94 NR_003568 664862 Mm.415635 NR_003568 Gpr137b-ps 2310041G17Rik|ENSMUSG00000075118 G protein-coupled receptor 137B, pseudogene pseudo common_peak1_28_140_0.209111962113774_7.24410733345568_0.680506758450318-3 chr17 86964677 86965272 + 0.680506758450318 NA intron (NM_145491, intron 2 of 4) intron (NM_145491, intron 2 of 4) 1863 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding unique_peak2_30_153_0.199895664039405_7.3667343727146_0.680385466207341 chr5 32851694 32852842 + 0.680385466207341 NA intron (NM_194340, intron 1 of 10) intron (NM_194340, intron 1 of 10) 1962 NM_194340 215476 Mm.248721 NM_194340 ENSMUSG00000054280 Prr14l 6030436E02Rik|C330019G07Rik|Prl14l proline rich 14-like protein-coding common_peak2_66_416_0.126640126705061_8.76722363679719_0.680354227028147-2 chr9 99242610 99244116 + 0.680354227028147 NA promoter-TSS (NM_023873) promoter-TSS (NM_023873) -105 NM_023873 68121 Mm.288739 NM_023873 ENSMUSG00000056267 Cep70 6720484E09Rik|Bite|C030018L16Rik centrosomal protein 70 protein-coding common_peak2_66_416_0.126640126705061_8.76722363679719_0.680354227028147 chr19 21784425 21785957 + 0.680354227028147 NA intron (NM_031997, intron 2 of 24) intron (NM_031997, intron 2 of 24) 6851 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak2_122_902_0.0869956037378525_9.86207997934978_0.680192669473288 chr1 171149849 171151428 + 0.680192669473288 NA promoter-TSS (NM_008623) promoter-TSS (NM_008623) -35 NM_025321 66052 Mm.198138 NM_025321 ENSMUSG00000058076 Sdhc 0610010E03Rik|AI316496|AU019277 succinate dehydrogenase complex, subunit C, integral membrane protein protein-coding common_peak2_21_137_-0.248726714084218_6.98416109973606_0.67997149191956 chr3 143646649 143647424 + 0.67997149191956 NA Intergenic Intergenic 65107 NR_040405 621809 Mm.360134 NR_040405 ENSMUSG00000105279 Gm6260 EG621809 predicted gene 6260 ncRNA common_peak1_130_1097_-0.0835750771583257_10.058874800426_0.679893126707511 chr11 75486736 75487496 + 0.679893126707511 NA exon (NM_138659, exon 1 of 42) exon (NM_138659, exon 1 of 42) 339 NM_138659 192159 Mm.3757 NM_138659 ENSMUSG00000020850 Prpf8 AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l pre-mRNA processing factor 8 protein-coding common_peak2_204_1875_-0.0638952605716288_10.8414964822296_0.679736378050815 chr14 27347138 27353132 + 0.679736378050815 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) -11254 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_123_1028_-0.0871204397869505_9.96346704700049_0.679597621748817 chr4 94978343 94979886 + 0.679597621748817 NA promoter-TSS (NM_177239) promoter-TSS (NM_177239) -14 NM_177239 320713 Mm.208868 NM_177239 ENSMUSG00000062627 Mysm1 C130067A03Rik|C530050H10Rik myb-like, SWIRM and MPN domains 1 protein-coding common_peak1_51_369_-0.149347904689025_8.4567075081718_0.679572486262184 chr8 18594705 18595744 + 0.679572486262184 NA promoter-TSS (NM_173189) promoter-TSS (NM_173189) 51 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT microcephaly, primary autosomal recessive 1 protein-coding common_peak2_102_721_0.0956928568895687_9.54370145533196_0.679402310421551 chr13 43175642 43178170 + 0.679402310421551 NA Intergenic Intergenic -5405 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_48_278_0.152754925081497_8.20049877436994_0.679378067165227 chr13 45965089 45965927 + 0.679378067165227 NA promoter-TSS (NM_001199304) promoter-TSS (NM_001199304) -517 NM_009124 20238 Mm.342683 NM_009124 ENSMUSG00000046876 Atxn1 2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1 ataxin 1 protein-coding common_peak1_37_256_-0.178648034610633_7.91630053188856_0.679354451059001 chr8 71396879 71397566 + 0.679354451059001 NA intron (NM_026636, intron 1 of 8) intron (NM_026636, intron 1 of 8) 367 NM_026636 68251 Mm.21749 NM_026636 ENSMUSG00000031820 Babam1 5430437P03Rik|Merit40 BRISC and BRCA1 A complex member 1 protein-coding common_peak1_53_315_0.145039129848849_8.37630031310153_0.679240868661999-2 chr7 3665636 3666242 + 0.679240868661999 NA promoter-TSS (NM_027203) promoter-TSS (NM_027203) -99 NM_027203 69757 Mm.389782 NM_027203 ENSMUSG00000078813 Leng1 1500001K17Rik leukocyte receptor cluster (LRC) member 1 protein-coding common_peak1_53_315_0.145039129848849_8.37630031310153_0.679240868661999 chr5 117388546 117389167 + 0.679240868661999 NA intron (NM_028128, intron 1 of 10) CpG 167 NM_028128 72151 Mm.27997 NM_028128 ENSMUSG00000029363 Rfc5 2610020K06Rik|2610209F07Rik|36.5kDa|36kDa|Recc5 replication factor C (activator 1) 5 protein-coding common_peak2_156_1362_-0.075094212399561_10.3750227406054_0.67911680472064 chr11 70686627 70689057 + 0.67911680472064 NA TTS (NM_001252484) TTS (NM_001252484) 263 NM_001190376 216874 Mm.473726 NM_178116 ENSMUSG00000040712 Camta2 Kiaa0909-hp|mKIAA0909 calmodulin binding transcription activator 2 protein-coding common_peak2_103_834_-0.0969865203477713_9.65713912718753_0.678786115637521 chr14 72861892 72864136 + 0.678786115637521 NA Intergenic Intergenic -153011 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding common_peak1_134_1137_-0.0819716885886663_10.1112989980122_0.678436561395918 chr9 21955199 21956668 + 0.678436561395918 NA promoter-TSS (NR_132099) promoter-TSS (NR_132099) 73 NR_132099 100049077 Mm.46647 NR_132099 LOC100049077 - uncharacterized LOC100049077 ncRNA common_peak2_44_311_-0.159223581297617_8.20579042821344_0.678094269227962 chr11 76242998 76244316 + 0.678094269227962 NA promoter-TSS (NM_026029) promoter-TSS (NM_026029) 42 NM_026029 67201 Mm.482113 NM_026029 ENSMUSG00000017286 Glod4 1700082G03Rik|2700085E05Rik|C81254 glyoxalase domain containing 4 protein-coding unique_peak2_44_311_-0.159223581297617_8.20579042821344_0.678094269227962 chr7 75644043 75645550 + 0.678094269227962 NA intron (NM_029332, intron 8 of 36) intron (NM_029332, intron 8 of 36) 189262 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_44_311_-0.159223581297617_8.20579042821344_0.678094269227962 chr10 44450479 44451279 + 0.678094269227962 NA intron (NM_007548, intron 2 of 6) intron (NM_007548, intron 2 of 6) 7869 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding common_peak1_187_1540_0.0667045632839454_10.6230034281568_0.678077367544058 chr4 22356773 22358613 + 0.678077367544058 NA intron (NR_104378, intron 1 of 8) CpG 150 NR_104380 269514 Mm.40708 NM_172988 ENSMUSG00000040410 Fbxl4 AI836810|FBL4|FBL5 F-box and leucine-rich repeat protein 4 protein-coding common_peak1_127_1067_-0.0846057350033185_10.0183930641859_0.678001618195528 chr15 31224155 31225749 + 0.678001618195528 NA intron (NM_146057, intron 1 of 3) intron (NM_146057, intron 1 of 3) 567 NM_146057 223453 Mm.222867 NM_146057 ENSMUSG00000039168 Dap 4921531N22Rik|AI789753|AU040360 death-associated protein protein-coding common_peak2_35_240_-0.181591663170939_7.82209350464449_0.677916028719381 chr13 81793327 81794580 + 0.677916028719381 NA intron (NM_007684, intron 4 of 4) intron (NM_007684, intron 4 of 4) 10661 NM_007684 12626 Mm.12481 NM_007684 ENSMUSG00000021537 Cetn3 MmCEN3 centrin 3 protein-coding common_peak1_35_240_-0.181591663170939_7.82209350464449_0.677916028719381 chr5 122157626 122158161 + 0.677916028719381 NA promoter-TSS (NM_013636) promoter-TSS (NM_013636) -386 NM_013636 19047 Mm.280784 NM_013636 ENSMUSG00000004455 Ppp1cc PP-1G|PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform protein-coding common_peak2_35_240_-0.181591663170939_7.82209350464449_0.677916028719381-2 chr8 84856762 84857631 + 0.677916028719381 NA intron (NM_025648, intron 1 of 12) CpG 210 NM_025648 66590 Mm.292517 NM_025648 ENSMUSG00000003808 Farsa 0610012A19Rik|Farsla phenylalanyl-tRNA synthetase, alpha subunit protein-coding common_peak1_35_240_-0.181591663170939_7.82209350464449_0.677916028719381-2 chr9 37208235 37208737 + 0.677916028719381 NA intron (NM_025464, intron 1 of 3) intron (NM_025464, intron 1 of 3) 170 NM_001310096 66279 Mm.41451 NM_025464 ENSMUSG00000032121 Tmem218 1810021J13Rik|AV004931 transmembrane protein 218 protein-coding common_peak2_183_1499_0.0675509522693361_10.5845222615179_0.677873580385433 chr12 55819939 55821876 + 0.677873580385433 NA 5' UTR (NM_001286263, exon 1 of 42) 5' UTR (NM_001286263, exon 1 of 42) 609 NM_019994 56784 Mm.292180 NM_019994 ENSMUSG00000021027 Ralgapa1 2310003F20Rik|4930400K19Rik|AI563624|GRIPE|Garnl1|Tulip1|mKIAA0884 Ral GTPase activating protein, alpha subunit 1 protein-coding common_peak2_277_2704_-0.0528157867352199_11.3750049853466_0.677787887783163 chr14 73381676 73385960 + 0.677787887783163 NA intron (NM_008410, intron 1 of 5) intron (NM_008410, intron 1 of 5) 1453 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak1_149_1289_-0.0763933308345912_10.2949586848933_0.677623243818441 chr6 86370825 86372165 + 0.677623243818441 NA promoter-TSS (NM_026506) promoter-TSS (NM_026506) -45 NM_026506 68011 Mm.276802 NM_026506 ENSMUSG00000057278 Snrpg 2810024K17Rik|AL022803|SMG|sm-G|snRNP-G small nuclear ribonucleoprotein polypeptide G protein-coding common_peak2_262_2345_0.0544537212469525_11.223214158652_0.677165719026902 chr19 53192851 53196752 + 0.677165719026902 NA intron (NM_013758, intron 1 of 15) intron (NM_013758, intron 1 of 15) 50804 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak2_59_436_-0.136220725716539_8.70337910664233_0.677132153981397 chr9 54585695 54587252 + 0.677132153981397 NA promoter-TSS (NM_029573) promoter-TSS (NM_029573) -38 NM_029573 67834 Mm.279195 NM_029573 ENSMUSG00000032279 Idh3a 1110003P10Rik|1500012E04Rik|AA407078|AI316514 isocitrate dehydrogenase 3 (NAD+) alpha protein-coding common_peak1_72_465_0.118132881731349_8.92325258551995_0.677068159483531 chr5 110057535 110058512 + 0.677068159483531 NA Intergenic Intergenic -41946 NM_207279 403178 Mm.297057 NM_207279 ENSMUSG00000064247 Plcxd1 A330045H12Rik|Gm576 phosphatidylinositol-specific phospholipase C, X domain containing 1 protein-coding common_peak1_23_151_-0.23415204535149_7.13085149076784_0.676771675629046 chr6 8639691 8640329 + 0.676771675629046 NA intron (NM_001252266, intron 11 of 11) MTD|LTR|ERVL-MaLR 118448 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak2_70_531_-0.122122889654172_8.9942209906741_0.676673181479181 chr1 92058763 92061102 + 0.676673181479181 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 120409 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak2_75_489_0.116950886767032_8.99511338238609_0.676673181479181 chr2 155073580 155074865 + 0.676673181479181 NA intron (NM_016661, intron 1 of 9) CpG 275 NM_016661 269378 Mm.330692 NM_016661 ENSMUSG00000027597 Ahcy AA987153|AL024110|CuBP|SAHH S-adenosylhomocysteine hydrolase protein-coding common_peak2_70_531_-0.122122889654172_8.9942209906741_0.676673181479181-2 chr2 37564662 37567375 + 0.676673181479181 NA 3' UTR (NM_146121, exon 26 of 26) 3' UTR (NM_146121, exon 26 of 26) 49392 NM_177383 338346 Mm.445325 NM_177383 ENSMUSG00000053164 Gpr21 C230004C13Rik G protein-coupled receptor 21 protein-coding common_peak2_116_847_0.0891575111979463_9.77249921016217_0.676661046701888 chr1 173418603 173421913 + 0.676661046701888 NA promoter-TSS (NM_001013779) promoter-TSS (NM_001013779) -346 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak2_267_2401_0.0537478868168009_11.256894379114_0.676600594837289 chr11 85233618 85236094 + 0.676600594837289 NA promoter-TSS (NR_028329) promoter-TSS (NR_028329) 264 NM_025825 66884 Mm.271997 NM_025825 ENSMUSG00000018481 Appbp2 1300003O07Rik|AI465480|PAT1 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 protein-coding common_peak1_54_393_-0.14076080107046_8.55167141892115_0.676404649470336 chr2 29672534 29673389 + 0.676404649470336 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 53241 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_244_2146_0.056875347930232_11.0965441498239_0.676388664273603 chr8 128611741 128614958 + 0.676388664273603 NA Intergenic Intergenic -72305 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_124_1037_-0.0854699493431781_9.97685575368629_0.676214904881977 chr9 44767003 44768021 + 0.676214904881977 NA intron (NM_145985, intron 1 of 9) CpG 296 NM_145985 213827 Mm.371682 NM_145985 ENSMUSG00000032096 Arcn1 4632432M07Rik|nur17 archain 1 protein-coding common_peak2_123_912_0.0854357771227967_9.87718893854562_0.676159927057069 chr4 119421553 119423379 + 0.676159927057069 NA promoter-TSS (NM_026494) promoter-TSS (NM_026494) -46 NM_026494 106564 Mm.27245 NM_026494 ENSMUSG00000028636 Ppcs 6330579B17Rik|AI413471|AI790434 phosphopantothenoylcysteine synthetase protein-coding common_peak1_90_616_0.10321836357063_9.32073586093473_0.676156087347744 chr15 64040304 64041939 + 0.676156087347744 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 19327 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_49_352_-0.15089686994844_8.38807593829696_0.675850980329537 chr7 126759632 126760324 + 0.675850980329537 NA intron (NM_011952, intron 1 of 8) intron (NM_011952, intron 1 of 8) 352 NM_011952 26417 Mm.8385 NM_011952 ENSMUSG00000063065 Mapk3 Erk-1|Erk1|Ert2|Esrk1|Mnk1|Mtap2k|Prkm3|p44|p44erk1|p44mapk mitogen-activated protein kinase 3 protein-coding common_peak2_49_352_-0.15089686994844_8.38807593829696_0.675850980329537 chr12 21166673 21168201 + 0.675850980329537 NA intron (NM_001135192, intron 1 of 28) intron (NM_001135192, intron 1 of 28) 55681 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_19_85_0.264869472928678_6.55869949116644_0.675836349268242 chr12 98901085 98901525 + 0.675836349268242 NA 5' UTR (NM_001081191, exon 1 of 44) 5' UTR (NM_001081191, exon 1 of 44) 179 NM_001081191 319670 Mm.390484 NM_001081191 ENSMUSG00000051166 Eml5 BC027154|C130068M19Rik echinoderm microtubule associated protein like 5 protein-coding unique_peak2_16_103_-0.29690345716692_6.55198798955763_0.675836349268218-2 chr11 51898174 51898891 + 0.675836349268218 NA Intergenic ID_B1|SINE|B4 -41051 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak2_16_103_-0.29690345716692_6.55198798955763_0.675836349268218 chr17 29716574 29717113 + 0.675836349268218 NA intron (NM_026782, intron 1 of 3) CpG 174 NM_026782 68597 Mm.390979 NM_026782 ENSMUSG00000024018 Ccdc167 1110021J02Rik coiled-coil domain containing 167 protein-coding common_peak1_16_103_-0.29690345716692_6.55198798955763_0.675836349268218 chr3 58690692 58691111 + 0.675836349268218 NA intron (NM_009174, intron 1 of 1) intron (NM_009174, intron 1 of 1) 1487 NM_009174 20439 Mm.2847 NM_009174 ENSMUSG00000036432 Siah2 AA415433|Sinh2 seven in absentia 2 protein-coding unique_peak2_16_103_-0.29690345716692_6.55198798955763_0.675836349268218-3 chr8 94398797 94399529 + 0.675836349268218 NA Intergenic Intergenic 12663 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding unique_peak2_16_103_-0.29690345716692_6.55198798955763_0.675836349268218 chr1 170969955 170970627 + 0.675836349268218 NA intron (NM_001077189, intron 1 of 7) (TAAA)n|Simple_repeat|Simple_repeat 5780 NM_001077189 14130 Mm.425062 NM_010187 ENSMUSG00000026656 Fcgr2b AI528646|CD32|F630109E10Rik|Fc[g]RII|FcgRII|Fcgr2|Fcgr2a|Fcr-2|Fcr-3|Ly-17|Ly-m20|LyM-1|Lym-1|fcRII Fc receptor, IgG, low affinity IIb protein-coding common_peak1_16_103_-0.29690345716692_6.55198798955763_0.675836349268218-2 chr7 66151578 66151906 + 0.675836349268218 NA intron (NM_001081163, intron 2 of 2) intron (NM_001081163, intron 2 of 2) 42227 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_33_225_-0.190030390254661_7.72516376728786_0.675517008724774-3 chr5 143548730 143549286 + 0.675517008724774 NA 5' UTR (NM_026050, exon 1 of 3) 5' UTR (NM_026050, exon 1 of 3) 302 NM_026050 67238 Mm.383219 NM_026050 ENSMUSG00000083012 Fam220a 1500026F15Rik|2810453I06Rik|AW047776|Acpin1|Sipar family with sequence similarity 220, member A protein-coding unique_peak2_33_225_-0.190030390254661_7.72516376728786_0.675517008724774 chr11 106961240 106962553 + 0.675517008724774 NA Intergenic Intergenic 37629 NM_010655 16647 Mm.12508 NM_010655 ENSMUSG00000018362 Kpna2 2410044B12Rik|IPOA1|PTAC58|Rch1 karyopherin (importin) alpha 2 protein-coding common_peak1_33_225_-0.190030390254661_7.72516376728786_0.675517008724774 chr1 171563596 171564335 + 0.675517008724774 NA intron (NM_018729, intron 1 of 8) intron (NM_018729, intron 1 of 8) 4772 NM_018729 18106 Mm.2299 NM_018729 ENSMUSG00000004709 Cd244 2B4|C9.1|F730046O15Rik|Ly90|NAIL|NKR2B4|Nmrk|SLAMF4 CD244 natural killer cell receptor 2B4 protein-coding common_peak1_33_225_-0.190030390254661_7.72516376728786_0.675517008724774-2 chr3 18623417 18624050 + 0.675517008724774 NA Intergenic Intergenic -143256 NR_040544 73959 Mm.60616 NR_040544 ENSMUSG00000102699 4930433B08Rik - RIKEN cDNA 4930433B08 gene ncRNA common_peak1_177_1582_-0.0688148601866363_10.5940381100439_0.675434797462291 chr11 69913370 69914798 + 0.675434797462291 NA promoter-TSS (NM_019726) promoter-TSS (NM_019726) -108 NM_019726 56310 Mm.477738 NM_019726 ENSMUSG00000023170 Gps2 AI505953 G protein pathway suppressor 2 protein-coding common_peak2_173_1540_-0.0702410046625772_10.5545306441835_0.675298218418143 chr7 111121478 111123437 + 0.675298218418143 NA non-coding (NR_015573, exon 1 of 3) non-coding (NR_015573, exon 1 of 3) 218 NR_015573 75479 Mm.381620 NR_015573 ENSMUSG00000110424 1700012D14Rik - RIKEN cDNA 1700012D14 gene ncRNA common_peak1_146_1259_-0.0781972653233112_10.2601093857256_0.675084006205483 chr13 119428312 119429761 + 0.675084006205483 NA 5' UTR (NM_145457, exon 1 of 11) 5' UTR (NM_145457, exon 1 of 11) 134 NM_145457 218693 Mm.490243 NM_145457 ENSMUSG00000025451 Paip1 PAIP-1 polyadenylate binding protein-interacting protein 1 protein-coding common_peak2_332_3149_0.0469165702433365_11.6445943983963_0.674941543600895 chr12 59218123 59220873 + 0.674941543600895 NA promoter-TSS (NM_001033156) promoter-TSS (NM_001033156) -15 NM_001033156 70611 Mm.311026 NM_001033156 ENSMUSG00000035329 Fbxo33 5730501N20Rik|AI642135 F-box protein 33 protein-coding common_peak1_237_2242_-0.0575292236602731_11.1024492932561_0.674851857410407 chr10 62338977 62341385 + 0.674851857410407 NA promoter-TSS (NR_038038) promoter-TSS (NR_038038) 240 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding unique_peak1_14_58_0.299401072049506_6.0323435853866_0.674812112184059 chr17 32369008 32369456 + 0.674812112184059 NA intron (NM_011717, intron 2 of 8) intron (NM_011717, intron 2 of 8) 18585 NM_212438 22404 Mm.274948 NM_011717 ENSMUSG00000024050 Wiz - widely-interspaced zinc finger motifs protein-coding common_peak1_14_58_0.299401072049506_6.0323435853866_0.674812112184059 chr10 61252962 61253395 + 0.674812112184059 NA intron (NM_001081127, intron 2 of 21) intron (NM_001081127, intron 2 of 21) 20260 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak2_254_2257_0.054946593232776_11.1683030673894_0.674727689244585 chr9 15016303 15019808 + 0.674727689244585 NA intron (NM_019482, intron 2 of 4) intron (NM_019482, intron 2 of 4) 27423 NM_019482 55991 Mm.142253 NM_019482 ENSMUSG00000031934 Panx1 AI847747 pannexin 1 protein-coding common_peak1_79_611_-0.113028992689163_9.20087334634807_0.674717636209855 chr5 115348424 115349486 + 0.674717636209855 NA promoter-TSS (NM_007748) promoter-TSS (NM_007748) 0 NM_007748 12861 Mm.43415 NM_007748 ENSMUSG00000041697 Cox6a1 VIaL cytochrome c oxidase subunit VIa polypeptide 1 protein-coding common_peak1_104_843_-0.0955189580303664_9.673339709692_0.674620768072527 chr15 96654527 96655909 + 0.674620768072527 NA Intergenic Intergenic -12305 NM_001166458 105727 Mm.103568 NM_134086 ENSMUSG00000023169 Slc38a1 AA408026|AA409865|AL022800|AU015942|NAT2 solute carrier family 38, member 1 protein-coding common_peak2_64_401_0.125862829153968_8.71398310575591_0.67444386841213 chr10 31313322 31314377 + 0.67444386841213 NA intron (NM_027168, intron 1 of 5) intron (NM_027168, intron 1 of 5) 444 NM_027168 69692 Mm.245537 NM_027168 ENSMUSG00000000295 Hddc2 2310057G13Rik HD domain containing 2 protein-coding common_peak1_128_1077_-0.0842797763452729_10.0320015745799_0.674400134525109 chr11 73047659 73048887 + 0.674400134525109 NA intron (NM_025818, intron 1 of 12) CpG 406 NM_025818 66874 Mm.41903 NM_025818 ENSMUSG00000020783 Ncbp3 1200014J11Rik|C130061O14Rik|C78393 nuclear cap binding subunit 3 protein-coding common_peak1_121_1008_-0.0875786968730292_9.93492111066984_0.674160835908152 chr5 136148174 136150062 + 0.674160835908152 NA 3' UTR (NM_178751, exon 3 of 3) 3' UTR (NM_178751, exon 3 of 3) 10337 NM_028070 72041 Mm.486605 NM_028070 ENSMUSG00000039754 Alkbh4 2010004B12Rik|Abj4 alkB homolog 4, lysine demethylase protein-coding common_peak1_31_210_-0.198233614395662_7.62198238150935_0.673868215874142 chr5 125138355 125139012 + 0.673868215874142 NA intron (NM_011424, intron 1 of 46) intron (NM_011424, intron 1 of 46) 40531 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding unique_peak2_31_210_-0.198233614395662_7.62198238150935_0.673868215874142-2 chr8 83652106 83653472 + 0.673868215874142 NA intron (NM_018771, intron 1 of 6) CpG 111 NM_018771 67903 Mm.20945 NM_018771 ENSMUSG00000019433 Gipc1 GIPC|Glut1CIP|Rgs19ip1|Semcap1|TIP-2|TaxIP2 GIPC PDZ domain containing family, member 1 protein-coding common_peak1_31_210_-0.198233614395662_7.62198238150935_0.673868215874142-2 chr7 99432629 99433211 + 0.673868215874142 NA intron (NM_201352, intron 4 of 17) MIRc|SINE|MIR -33084 NM_028145 72184 Mm.153585 NM_028145 ENSMUSG00000035298 Klhl35 2810406K13Rik kelch-like 35 protein-coding unique_peak2_31_210_-0.198233614395662_7.62198238150935_0.673868215874142 chr16 16895986 16897502 + 0.673868215874142 NA intron (NM_176833, intron 1 of 7) intron (NM_176833, intron 1 of 7) 275 NM_176833 68606 Mm.230296 NM_176833 ENSMUSG00000026181 Ppm1f 1110021B16Rik|4933427B07Rik|CaMKPase|Popx2|mKIAA0015 protein phosphatase 1F (PP2C domain containing) protein-coding common_peak2_270_2621_-0.0529844368743486_11.3299597517846_0.673761086368 chr3 142880501 142883089 + 0.673761086368 NA 5' UTR (NM_178654, exon 1 of 22) 5' UTR (NM_178654, exon 1 of 22) 209 NM_178654 109333 Mm.244236 NM_178654 ENSMUSG00000004591 Pkn2 6030436C20Rik|AI507382|PRK2|Prkcl2|Stk7 protein kinase N2 protein-coding unique_peak2_27_180_-0.21328113706528_7.39320531855057_0.673599597665221 chr11 77621901 77623110 + 0.673599597665221 NA Intergenic Intergenic -14690 NM_144825 216965 Mm.340436 NM_144825 ENSMUSG00000017291 Taok1 2810468K05Rik|AU020252|D130018F14Rik|Map3k16|Markk|Psk2|mKIAA1361 TAO kinase 1 protein-coding common_peak1_27_180_-0.21328113706528_7.39320531855057_0.673599597665221 chr18 31635090 31635504 + 0.673599597665221 NA intron (NM_172965, intron 1 of 20) CpG 914 NM_172965 269003 Mm.194538 NM_172965 ENSMUSG00000024260 Sap130 2610304F09Rik|6720406D06 Sin3A associated protein protein-coding unique_peak2_27_180_-0.21328113706528_7.39320531855057_0.673599597665221-2 chr14 118929466 118930826 + 0.673599597665221 NA Intergenic B1_Mur3|SINE|Alu -4676 NM_025943 66573 Mm.87456 NM_025943 ENSMUSG00000042156 Dzip1 2510025K24Rik|2810422M04Rik DAZ interacting protein 1 protein-coding common_peak2_51_301_0.143628816502209_8.31021914757618_0.673596770696983 chr14 68050622 68051831 + 0.673596770696983 NA Intergenic Intergenic -32658 NM_010910 18039 Mm.1956 NM_010910 ENSMUSG00000022055 Nefl AI847934|CMT2E|NF-L|NF68|Nfl neurofilament, light polypeptide protein-coding common_peak1_110_793_0.0909229702217385_9.67845668225383_0.673252660754237 chr9 94669177 94670924 + 0.673252660754237 NA 5' UTR (NM_177909, exon 1 of 16) 5' UTR (NM_177909, exon 1 of 16) 158 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak1_29_195_-0.206053411517505_7.51168313835646_0.673148736401484 chr5 100643411 100644086 + 0.673148736401484 NA Intergenic Intergenic 30508 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding common_peak1_25_166_-0.22828304783312_7.26956276855749_0.673124485713216 chr3 131157798 131158237 + 0.673124485713216 NA intron (NM_001276402, intron 3 of 9) intron (NM_001276402, intron 3 of 9) 45226 NM_001276403 16842 Mm.255219 NM_010703 ENSMUSG00000027985 Lef1 3000002B05|AI451430|Lef-1 lymphoid enhancer binding factor 1 protein-coding common_peak1_238_2253_-0.0571672860796433_11.1096881571324_0.67299054344301 chr17 84145224 84147391 + 0.67299054344301 NA Intergenic Intergenic 41640 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_219_1876_0.0603027059277537_10.9043642877948_0.672751651233011 chr17 71526005 71527858 + 0.672751651233011 NA promoter-TSS (NM_023294) promoter-TSS (NM_023294) -74 NM_023294 67052 Mm.225956 NM_023294 ENSMUSG00000024056 Ndc80 2610020P18Rik|AV139730|HEC|HEC1|Kntc2 NDC80 kinetochore complex component protein-coding common_peak1_124_921_0.0854978385853649_9.89137185972202_0.672603119540189 chr5 64159540 64161685 + 0.672603119540189 NA intron (NM_001310611, intron 1 of 21) intron (NM_001310611, intron 1 of 21) 352 NM_001310611 57915 Mm.286353 NM_019636 ENSMUSG00000029174 Tbc1d1 1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108 TBC1 domain family, member 1 protein-coding common_peak1_13_83_-0.33236498394719_6.22613493080517_0.672333935078526 chr15 78475787 78476149 + 0.672333935078526 NA Intergenic Intergenic -7334 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding unique_peak2_13_83_-0.33236498394719_6.22613493080517_0.672333935078526 chr1 21274790 21275537 + 0.672333935078526 NA Intergenic MER5A|DNA|hAT-Charlie 23149 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo unique_peak2_13_83_-0.33236498394719_6.22613493080517_0.672333935078526-3 chr8 84965439 84966077 + 0.672333935078526 NA intron (NM_027187, intron 1 of 7) intron (NM_027187, intron 1 of 7) 253 NM_027187 69724 Mm.182470 NM_027187 ENSMUSG00000052926 Rnaseh2a 2400006P09Rik|RNASEHI|RNHIA|RNHL ribonuclease H2, large subunit protein-coding common_peak1_13_83_-0.33236498394719_6.22613493080517_0.672333935078526-2 chr17 50158124 50158439 + 0.672333935078526 NA intron (NM_181397, intron 2 of 9) B4|SINE|B4 32216 NM_181397 76438 Mm.41854 NM_181397 ENSMUSG00000039316 Rftn1 2310015N21Rik|AI853526 raftlin lipid raft linker 1 protein-coding unique_peak2_13_83_-0.33236498394719_6.22613493080517_0.672333935078526-2 chr10 47454174 47454962 + 0.672333935078526 NA Intergenic MMVL30-int|LTR|ERV1 1209819 NR_028276 108637 NR_028276 ENSMUSG00000096263 Snord14c Gm23107|Rnu14|U14 small nucleolar RNA, C/D box 14C snoRNA common_peak1_52_376_-0.142678947825551_8.48708123935589_0.672175202168015 chr5 121584048 121584988 + 0.672175202168015 NA intron (NM_001308450, intron 1 of 10) intron (NM_001308450, intron 1 of 10) 9306 NM_009656 11669 Mm.284446 NM_009656 ENSMUSG00000029455 Aldh2 AHD-M1|ALDH-E2|ALDHI|Ahd-5|Ahd5 aldehyde dehydrogenase 2, mitochondrial protein-coding common_peak2_52_376_-0.142678947825551_8.48708123935589_0.672175202168015 chr5 129715051 129716333 + 0.672175202168015 NA 5' UTR (NM_025450, exon 2 of 4) 5' UTR (NM_025450, exon 2 of 4) 164 NM_025450 66258 Mm.249809 NM_025450 ENSMUSG00000034211 Mrps17 1810006P02Rik|Mprs17 mitochondrial ribosomal protein S17 protein-coding common_peak1_52_376_-0.142678947825551_8.48708123935589_0.672175202168015-2 chr7 65693142 65694107 + 0.672175202168015 NA intron (NM_026795, intron 1 of 4) CpG 207 NM_026795 68634 Mm.476828 NM_026795 ENSMUSG00000078681 Tm2d3 1110025I09Rik|5930422O05Rik|Blp2 TM2 domain containing 3 protein-coding common_peak1_37_200_0.175924823404318_7.73901410288109_0.672004224133845 chr18 64488537 64489201 + 0.672004224133845 NA intron (NM_007998, intron 1 of 10) CpG 197 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding common_peak1_107_766_0.0923494217093737_9.62925747835762_0.671782299622751 chr2 170154644 170155929 + 0.671782299622751 NA Intergenic Intergenic -12611 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak1_136_1157_-0.0810819814543766_10.136878547262_0.671731360190201 chr4 124751427 124753137 + 0.671731360190201 NA intron (NR_126474, intron 7 of 24) intron (NR_126474, intron 7 of 24) 8501 NR_030480 735263 NR_030480 ENSMUSG00000076119 Mir698 Mirn698|mir-698|mmu-mir-698 microRNA 698 ncRNA common_peak2_68_513_-0.123029228947084_8.94410993472034_0.671720342189012 chr2 131189024 131191041 + 0.671720342189012 NA intron (NM_023117, intron 3 of 15) intron (NM_023117, intron 3 of 15) 3084 NM_001111075 12531 Mm.38444 NM_023117 ENSMUSG00000027330 Cdc25b AI604853 cell division cycle 25B protein-coding common_peak2_319_2997_0.0477988044283393_11.573684070162_0.671650947838645 chr9 42094997 42099238 + 0.671650947838645 NA intron (NM_011436, intron 3 of 47) intron (NM_011436, intron 3 of 47) 27172 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak1_70_449_0.11937835462998_8.87347036853203_0.671542750858472 chr18 74216174 74216946 + 0.671542750858472 NA intron (NM_028868, intron 1 of 14) CpG 348 NM_028868 74322 Mm.17537 NM_028868 ENSMUSG00000024560 Cxxc1 2410002I16Rik|5830420C16Rik|AI426635|Cfp1|Cgbp|PHF18 CXXC finger 1 (PHD domain) protein-coding common_peak1_70_449_0.11937835462998_8.87347036853203_0.671542750858472-2 chr9 44319428 44320978 + 0.671542750858472 NA promoter-TSS (NM_027909) promoter-TSS (NM_027909) 79 NM_027909 71764 Mm.491174 NM_027909 ENSMUSG00000032120 C2cd2l 1300006O23Rik|Tmem24 C2 calcium-dependent domain containing 2-like protein-coding common_peak1_59_362_0.131443005788309_8.56954724088991_0.671461785221696 chr15 75112535 75113686 + 0.671461785221696 NA Intergenic Intergenic -1161 NM_001099217 100041546 Mm.482110 NM_001099217 ENSMUSG00000022584 Ly6c2 Ly-6C.2|Ly-6C2 lymphocyte antigen 6 complex, locus C2 protein-coding common_peak1_40_279_-0.167839751879542_8.0453631410052_0.671366748565136 chr17 23550442 23551074 + 0.671366748565136 NA promoter-TSS (NR_126485) promoter-TSS (NR_126485) -41 NR_126485 320020 Mm.445111 NR_126484 6330415G19Rik - RIKEN cDNA 6330415G19 gene ncRNA common_peak2_40_279_-0.167839751879542_8.0453631410052_0.671366748565136 chr11 58846895 58847798 + 0.671366748565136 NA Intergenic CpG 6230 NM_146537 258530 Mm.377556 NM_146537 ENSMUSG00000094805 Olfr311 MOR222-1 olfactory receptor 311 protein-coding common_peak2_44_249_0.160394352902545_8.04598146111336_0.671366748565136 chr9 45274000 45275392 + 0.671366748565136 NA Intergenic Intergenic -5550 NM_008348 16154 Mm.379327 NM_008348 ENSMUSG00000032089 Il10ra AW553859|CDw210|CDw210a|IL-10R1|IL-10RA|Il10r|mIL-10R interleukin 10 receptor, alpha protein-coding common_peak2_40_279_-0.167839751879542_8.0453631410052_0.671366748565136-3 chr9 74957806 74959067 + 0.671366748565136 NA intron (NM_001113283, intron 2 of 12) B3|SINE|B2 5383 NM_001113283 235493 Mm.208955 NM_153584 ENSMUSG00000034858 Fam214a 6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370 family with sequence similarity 214, member A protein-coding common_peak2_40_279_-0.167839751879542_8.0453631410052_0.671366748565136-2 chr5 54105034 54106567 + 0.671366748565136 NA intron (NM_001081103, intron 7 of 11) intron (NM_001081103, intron 7 of 11) 107277 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak2_71_539_-0.118905612805452_9.01736279064811_0.670868535720773 chr13 23445004 23446874 + 0.670868535720773 NA Intergenic CpG -14922 NR_015492 320842 Mm.487476 NR_015492 ENSMUSG00000085024 C230035I16Rik - RIKEN cDNA C230035I16 gene ncRNA common_peak1_115_949_-0.0898957663330293_9.8468358200518_0.670779554040766 chr5 124478518 124479643 + 0.670779554040766 NA promoter-TSS (NM_030259) promoter-TSS (NM_030259) -845 NM_030259 80291 Mm.425280 NM_030259 ENSMUSG00000029401 Rilpl2 - Rab interacting lysosomal protein-like 2 protein-coding common_peak1_128_959_0.0829710907987149_9.94837614100788_0.670760889608541 chr12 85686042 85687766 + 0.670760889608541 NA 5' UTR (NM_016767, exon 1 of 3) 5' UTR (NM_016767, exon 1 of 3) 184 NM_016767 53314 Mm.6672 NM_016767 ENSMUSG00000034266 Batf B-ATF|SFA-2 basic leucine zipper transcription factor, ATF-like protein-coding common_peak2_383_3762_0.042557138769638_11.8989461434527_0.67051812463307 chr11 20740383 20743362 + 0.67051812463307 NA promoter-TSS (NM_001252503) promoter-TSS (NM_001252503) -316 NM_181411 216549 Mm.356580 NM_181411 ENSMUSG00000049659 Aftph - aftiphilin protein-coding common_peak1_204_1874_-0.0631260283268578_10.8411118661072_0.670427833472818 chr14 26579062 26580586 + 0.670427833472818 NA exon (NM_145969, exon 1 of 18) exon (NM_145969, exon 1 of 18) 274 NM_145969 211922 Mm.260512 NM_145969 ENSMUSG00000040818 Dennd6a Fam116a DENN/MADD domain containing 6A protein-coding common_peak1_54_323_0.141441015501291_8.41057051063527_0.670334271929931 chr2 174415836 174416395 + 0.670334271929931 NA intron (NM_020580, intron 1 of 14) CpG 311 NM_020580 57314 Mm.271709 NM_020580 ENSMUSG00000016253 Nelfcd 2410003I03Rik|C77797|Th1|Th1l negative elongation factor complex member C/D, Th1l protein-coding common_peak1_385_4016_-0.0424851424128541_11.950660174839_0.670160599146601 chr14 54144572 54148825 + 0.670160599146601 NA Intergenic Intergenic 107231 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_76_498_0.113825535435806_9.01980877305516_0.670155547707015 chr5 143403801 143404537 + 0.670155547707015 NA intron (NM_025841, intron 1 of 4) CpG 349 NM_025841 66913 Mm.181880 NM_025841 ENSMUSG00000079111 Kdelr2 1110007A14Rik KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 protein-coding common_peak2_35_186_0.184403213171387_7.63909606647333_0.670115726028575 chr17 26780895 26781677 + 0.670115726028575 NA intron (NM_172149, intron 1 of 5) CpG 207 NM_172149 224630 Mm.21795 NM_172149 ENSMUSG00000024191 Bnip1 2010005M06Rik|5930429G21Rik|Sec20 BCL2/adenovirus E1B interacting protein 1 protein-coding unique_peak2_35_186_0.184403213171387_7.63909606647333_0.670115726028575 chr10 67068605 67069884 + 0.670115726028575 NA intron (NM_178606, intron 1 of 7) intron (NM_178606, intron 1 of 7) 27744 NM_001204915 28193 Mm.41272 NM_178606 ENSMUSG00000019873 Reep3 D10Ucla1 receptor accessory protein 3 protein-coding common_peak1_35_186_0.184403213171387_7.63909606647333_0.670115726028575 chr17 27124899 27125493 + 0.670115726028575 NA exon (NM_026063, exon 3 of 4) exon (NM_026063, exon 3 of 4) 8695 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding unique_peak2_35_186_0.184403213171387_7.63909606647333_0.670115726028575-2 chr8 35627707 35629219 + 0.670115726028575 NA intron (NM_001081279, intron 1 of 2) LTR40a|LTR|ERVL -39443 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_310_2892_0.0487487832044646_11.5227249995318_0.670094739992015 chr16 91405517 91407999 + 0.670094739992015 NA intron (NM_008349, intron 1 of 6) intron (NM_008349, intron 1 of 6) 523 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding common_peak1_266_2391_0.053151210719367_11.2505772795578_0.670063615861772 chr2 13410055 13412379 + 0.670063615861772 NA intron (NM_001081084, intron 27 of 66) intron (NM_001081084, intron 27 of 66) 80659 NM_001081084 65969 Mm.313915 NM_001081084 ENSMUSG00000026726 Cubn AA408369|AL022750|D2Wsu88e cubilin (intrinsic factor-cobalamin receptor) protein-coding common_peak1_60_444_-0.133142074806788_8.73109048845037_0.670047816131015 chr9 63132411 63133406 + 0.670047816131015 NA Intergenic Intergenic 14072 NM_172446 207667 Mm.36349 NM_172446 ENSMUSG00000022245 Skor1 AV273001|C230094B15Rik|Corl1|Lbxcor1 SKI family transcriptional corepressor 1 protein-coding common_peak2_86_674_-0.105945861272341_9.34577076130202_0.669809893544785 chr16 87712095 87714337 + 0.669809893544785 NA intron (NM_007520, intron 1 of 4) intron (NM_007520, intron 1 of 4) 14262 NM_007520 12013 Mm.26147 NM_007520 ENSMUSG00000025612 Bach1 6230421P05Rik|AI323795 BTB and CNC homology 1, basic leucine zipper transcription factor 1 protein-coding common_peak1_170_1368_0.0697265044455584_10.4537699834807_0.669636877392659 chr6 124964751 124966127 + 0.669636877392659 NA promoter-TSS (NM_012003) promoter-TSS (NM_012003) -42 NM_012003 26894 Mm.244536 NM_012003 ENSMUSG00000030127 Cops7a D6Ertd35e COP9 signalosome subunit 7A protein-coding common_peak2_21_97_0.245087898578743_6.73725379340458_0.669548513789148 chr11 77512799 77513389 + 0.669548513789148 NA intron (NM_001024920, intron 1 of 6) CpG-2275 179 NM_001024920 216964 Mm.341211 NM_001024920 ENSMUSG00000044328 Trp53i13 2410019G02Rik|Tp53i13 transformation related protein 53 inducible protein 13 protein-coding common_peak1_21_97_0.245087898578743_6.73725379340458_0.669548513789148-7 chr9 69290113 69290533 + 0.669548513789148 NA intron (NM_001289916, intron 1 of 9) CpG 482 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding common_peak1_21_97_0.245087898578743_6.73725379340458_0.669548513789148-4 chr2 155592225 155592766 + 0.669548513789148 NA intron (NM_008180, intron 1 of 12) CpG 315 NM_001291111 14854 Mm.252316 NM_008180 ENSMUSG00000027610 Gss AI314904|GS-A/GS-B|GSH-S glutathione synthetase protein-coding common_peak1_21_97_0.245087898578743_6.73725379340458_0.669548513789148-6 chr5 124214829 124215263 + 0.669548513789148 NA intron (NM_011256, intron 2 of 24) intron (NM_011256, intron 2 of 24) -14679 NR_045369 75927 Mm.410803 NR_045369 ENSMUSG00000090220 Pitpnm2os1 4930568K20Rik phosphatidylinositol transfer protein, membrane-associated 2, opposite strand 1 ncRNA unique_peak2_18_116_-0.270000516186514_6.73536446149015_0.669548513789148-2 chr17 74717193 74718161 + 0.669548513789148 NA promoter-TSS (NM_152817) promoter-TSS (NM_152817) -73 NM_152817 74196 Mm.209503 NM_152817 ENSMUSG00000024078 Ttc27 2610511O17Rik tetratricopeptide repeat domain 27 protein-coding common_peak1_21_97_0.245087898578743_6.73725379340458_0.669548513789148-5 chr3 47482222 47482773 + 0.669548513789148 NA Intergenic MMVL30-int|LTR|ERV1 544262 NR_040408 666202 Mm.465057 NR_040408 ENSMUSG00000103257 Gm7977 EG666202 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide pseudogene pseudo common_peak1_21_97_0.245087898578743_6.73725379340458_0.669548513789148 chr1 161670589 161671193 + 0.669548513789148 NA Intergenic Intergenic 117604 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding unique_peak2_21_97_0.245087898578743_6.73725379340458_0.669548513789148-3 chrX 50606756 50607554 + 0.669548513789148 NA intron (NR_015505, intron 7 of 19) intron (NR_015505, intron 7 of 19) 28166 NR_015505 103012 Mm.482523 NR_015505 ENSMUSG00000085396 Firre 5830467J12Rik|6720401G13Rik|AW048145 functional intergenic repeating RNA element ncRNA unique_peak2_18_116_-0.270000516186514_6.73536446149015_0.669548513789148 chr1 153726011 153726896 + 0.669548513789148 NA intron (NR_046171, intron 2 of 2) intron (NR_046171, intron 2 of 2) 11376 NR_046171 329271 Mm.384841 NR_046171 ENSMUSG00000100334 C230024C17Rik C230024C17 RIKEN cDNA C230024C17 gene ncRNA unique_peak2_21_97_0.245087898578743_6.73725379340458_0.669548513789148 chr12 114615865 114616563 + 0.669548513789148 NA Intergenic Intergenic -102520 NR_106063 102465664 NR_106063 ENSMUSG00000098357 Mir7094-2 Gm27508|mmu-mir-7094-2 microRNA 7094-2 ncRNA common_peak1_21_97_0.245087898578743_6.73725379340458_0.669548513789148-2 chr12 3284141 3284672 + 0.669548513789148 NA intron (NM_016676, intron 1 of 5) ID_B1|SINE|B4 25563 NM_016676 19325 Mm.378993 NM_016676 ENSMUSG00000020671 Rab10 AW107754 RAB10, member RAS oncogene family protein-coding common_peak1_21_97_0.245087898578743_6.73725379340458_0.669548513789148-3 chr16 78532454 78532986 + 0.669548513789148 NA Intergenic Intergenic -27596 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA unique_peak2_21_97_0.245087898578743_6.73725379340458_0.669548513789148-2 chr7 19325303 19325920 + 0.669548513789148 NA Intergenic Intergenic -15566 NM_008036 14282 Mm.248335 NM_008036 ENSMUSG00000003545 Fosb - FBJ osteosarcoma oncogene B protein-coding common_peak1_62_385_0.129152122683703_8.65703309860993_0.669529142385295 chr17 56667809 56669169 + 0.669529142385295 NA Intergenic CT-rich|Low_complexity|Low_complexity -4736 NM_001252466 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding common_peak2_384_3774_0.0425661985515831_11.9035440283756_0.669360676105752 chr19 18617476 18622886 + 0.669360676105752 NA intron (NM_017375, intron 1 of 9) intron (NM_017375, intron 1 of 9) 11632 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_199_1665_0.0636794403299046_10.7340124055305_0.669305557813246 chr3 152148872 152151035 + 0.669305557813246 NA intron (NM_016867, intron 1 of 5) intron (NM_016867, intron 1 of 5) 15947 NM_016867 54120 Mm.97 NM_016867 ENSMUSG00000039131 Gipc2 2200002N01Rik|AU021850|Semcap2 GIPC PDZ domain containing family, member 2 protein-coding common_peak1_126_1057_-0.084913217939981_10.004667303144_0.668910008050951 chr11 11723599 11725584 + 0.668910008050951 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 34414 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_464_4773_0.0379394566841338_12.2399525794238_0.668803844224174 chr2 24383113 24388179 + 0.668803844224174 NA intron (NM_177611, intron 1 of 16) intron (NM_177611, intron 1 of 16) 249 NM_177611 215632 Mm.490434 NM_177611 ENSMUSG00000026979 Psd4 BC046518|EFA6B pleckstrin and Sec7 domain containing 4 protein-coding common_peak1_125_931_0.0840353264838587_9.90620380789621_0.668729403680903 chr13 100743876 100745046 + 0.668729403680903 NA intron (NM_001190264, intron 1 of 3) CpG 198 NM_001190264 66128 Mm.306173 NM_025369 ENSMUSG00000061474 Mrps36 1110018B13Rik|S36mt mitochondrial ribosomal protein S36 protein-coding common_peak2_407_4057_0.0409545609298654_12.0070304302216_0.668335842897078 chr13 24596560 24608546 + 0.668335842897078 NA intron (NR_024599, intron 1 of 1) intron (NR_024599, intron 1 of 1) 2214 NR_024599 76024 Mm.440710 NR_024599 Gm11346 5830431A10Rik|AI447617|Gm11347|OTTMUSG00000000601|OTTMUSG00000000602 X-linked lymphocyte-regulated 5 pseudogene pseudo common_peak2_358_3459_0.0445367767234277_11.7788247108858_0.668189500279769 chr16 49765904 49772930 + 0.668189500279769 NA Intergenic Intergenic 70123 NM_028680 73916 Mm.241276 NM_028680 ENSMUSG00000032965 Ift57 4833420A15Rik|Esrrbl1|Hippi|MHS4R2 intraflagellar transport 57 protein-coding unique_peak2_45_319_-0.156854979607497_8.24350060508361_0.668129381163851 chr14 101841828 101843163 + 0.668129381163851 NA intron (NM_201529, intron 4 of 30) intron (NM_201529, intron 4 of 30) 112567 NM_201529 380928 Mm.218981 NM_201529 ENSMUSG00000033060 Lmo7 C78582|FBXO20|Gm914|mKIAA0858 LIM domain only 7 protein-coding common_peak2_160_1402_-0.0723023802609202_10.4181481034894_0.668059323357348 chr7 133636809 133638610 + 0.668059323357348 NA promoter-TSS (NM_178115) promoter-TSS (NM_178115) 34 NM_178115 214764 Mm.174044 NM_145995 ENSMUSG00000039990 Edrf1 2700050L05Rik|AU022667|AW558805 erythroid differentiation regulatory factor 1 protein-coding common_peak1_109_890_-0.0913782919496509_9.7535924755471_0.667950444202261 chr11 117323653 117325727 + 0.667950444202261 NA intron (NM_001113487, intron 2 of 10) (TG)n|Simple_repeat|Simple_repeat -7025 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_108_775_0.0918293933425094_9.64582753885838_0.667615071062338 chr5 123748507 123749464 + 0.667615071062338 NA promoter-TSS (NM_001042421) promoter-TSS (NM_001042421) 429 NM_001005525 208606 Mm.276341 NM_025438 ENSMUSG00000029422 Rsrc2 1500011J06Rik arginine/serine-rich coiled-coil 2 protein-coding common_peak1_348_3340_0.0450360299292978_11.7285822822996_0.667351162440206 chr2 6718925 6722736 + 0.667351162440206 NA intron (NM_001310447, intron 1 of 11) intron (NM_001310447, intron 1 of 11) 832 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak2_33_173_0.187205076311799_7.53654603400463_0.667121432883817 chr1 80643278 80644744 + 0.667121432883817 NA intron (NM_001285927, intron 2 of 55) intron (NM_001285927, intron 2 of 55) 21341 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak1_96_767_-0.0996241373577469_9.53515043204228_0.666913324269044 chr5 114805396 114806837 + 0.666913324269044 NA TTS (NM_026718) TTS (NM_026718) 7860 NR_027818 66236 Mm.268546 NR_027817 ENSMUSG00000072694 1500011B03Rik AI415201|AV141149|AW556386 RIKEN cDNA 1500011B03 gene ncRNA common_peak2_314_3142_-0.0482118099686506_11.5938206518144_0.666494636750224 chr17 3113720 3116396 + 0.666494636750224 NA promoter-TSS (NM_134123) promoter-TSS (NM_134123) 86 NM_134123 106583 Mm.124373 NM_134123 ENSMUSG00000046201 Scaf8 A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116 SR-related CTD-associated factor 8 protein-coding common_peak1_149_1288_-0.0752745288856271_10.2943992839188_0.666442015795116 chr3 101295488 101297553 + 0.666442015795116 NA Intergenic Intergenic -8581 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding unique_peak2_23_109_0.232415754567435_6.89756759080838_0.66641408837269-2 chr16 75894134 75895223 + 0.66641408837269 NA intron (NM_023380, intron 1 of 7) intron (NM_023380, intron 1 of 7) 14588 NM_023380 67742 Mm.131406 NM_023380 ENSMUSG00000022876 Samsn1 4930571B16Rik|930571B16Rik|Hacs1|SLy2 SAM domain, SH3 domain and nuclear localization signals, 1 protein-coding unique_peak2_23_109_0.232415754567435_6.89756759080838_0.66641408837269 chr10 95777296 95778237 + 0.66641408837269 NA Intergenic Intergenic -162897 NM_001001932 216238 Mm.210035 NM_001001932 ENSMUSG00000036499 Eea1 A430109M19Rik|B230358H09Rik|ZFYVE2 early endosome antigen 1 protein-coding unique_peak2_23_109_0.232415754567435_6.89756759080838_0.66641408837269-3 chr17 47759299 47760373 + 0.66641408837269 NA intron (NM_001161723, intron 1 of 8) intron (NM_001161723, intron 1 of 8) 21905 NM_001161723 21425 Mm.2305 NM_011549 ENSMUSG00000023990 Tfeb Tcfeb|bHLHe35 transcription factor EB protein-coding common_peak2_105_748_0.093532168170718_9.59558799254411_0.666189869418228 chr17 22224855 22226266 + 0.666189869418228 NA promoter-TSS (NM_001205095) promoter-TSS (NM_001205095) 54 NM_001205095 240038 Mm.227945 NM_001205095 ENSMUSG00000096433 Zfp994 EG240038|Gm4944 zinc finger protein 994 protein-coding common_peak2_92_634_0.100203939228061_9.36071475127356_0.665882037527628 chr5 52833235 52834948 + 0.665882037527628 NA promoter-TSS (NM_024213) promoter-TSS (NM_024213) -44 NM_024213 52206 Mm.272568 NM_024213 ENSMUSG00000029176 Anapc4 2610306D21Rik|APC4|D5Ertd249e anaphase promoting complex subunit 4 protein-coding common_peak1_92_634_0.100203939228061_9.36071475127356_0.665882037527628 chr12 76403204 76404264 + 0.665882037527628 NA promoter-TSS (NM_001002012) promoter-TSS (NM_001002012) -442 NM_001002012 15512 Mm.296181 NM_008301 ENSMUSG00000059970 Hspa2 70kDa|HSP70.2|HSP70A2|Hsp70-2 heat shock protein 2 protein-coding common_peak1_69_521_-0.119847970859995_8.96798201113989_0.665791877845233 chrX 155261764 155263001 + 0.665791877845233 NA promoter-TSS (NM_019736) promoter-TSS (NM_019736) -61 NM_001313718 56360 Mm.268710 NM_019736 ENSMUSG00000025287 Acot9 0610041P13Rik|Acate2|C76421|MT-ACT48|MTE-2|U8|p48 acyl-CoA thioesterase 9 protein-coding common_peak2_69_521_-0.119847970859995_8.96798201113989_0.665791877845233 chr17 21462927 21465007 + 0.665791877845233 NA exon (NM_009558, exon 5 of 5) exon (NM_009558, exon 5 of 5) 13593 NM_009558 22709 Mm.293030 NM_009558 ENSMUSG00000023892 Zfp51 Zfp-51|zfec12 zinc finger protein 51 protein-coding common_peak1_138_1176_-0.0789138242458431_10.1614416929155_0.665578467428283 chr16 38452160 38453462 + 0.665578467428283 NA promoter-TSS (NM_007414) promoter-TSS (NM_007414) -122 NM_007414 11544 Mm.20047 NM_007414 ENSMUSG00000002844 Adprh Arh1 ADP-ribosylarginine hydrolase protein-coding common_peak2_52_308_0.144278737538738_8.34360239667374_0.665552876726527 chr9 96415249 96416940 + 0.665552876726527 NA Intergenic MER53|DNA|hAT -51795 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak1_566_6107_0.0333938454614966_12.5931812695276_0.665398590077481 chr15 96284425 96288246 + 0.665398590077481 NA Intergenic CpG -1187 NM_175251 77044 Mm.17166 NM_175251 ENSMUSG00000033237 Arid2 1700124K17Rik|4432409D24Rik|zipzap/p200 AT rich interactive domain 2 (ARID, RFX-like) protein-coding common_peak2_47_271_0.152924938028113_8.1639253102644_0.665393723834167 chr10 118861114 118862771 + 0.665393723834167 NA intron (NM_001014390, intron 2 of 2) intron (NM_001014390, intron 2 of 2) 6961 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_47_271_0.152924938028113_8.1639253102644_0.665393723834167 chr5 110109872 110110619 + 0.665393723834167 NA 5' UTR (NM_001163996, exon 1 of 5) 5' UTR (NM_001163996, exon 1 of 5) 153 NM_001163996 675812 Mm.442122 NM_001163996 ENSMUSG00000023284 Zfp605 A830023I12Rik zinc finger protein 605 protein-coding common_peak1_71_457_0.118706196148436_8.89855688617116_0.665325023782863 chr8 111056304 111057282 + 0.665325023782863 NA exon (NM_028274, exon 1 of 1) exon (NM_028274, exon 1 of 1) 454 NM_028274 72544 Mm.24174 NM_028274 ENSMUSG00000109941 Exosc6 2610510N21Rik|C76919|Mtr3 exosome component 6 protein-coding common_peak2_120_997_-0.086329160701812_9.91973142498635_0.665311484316055 chr11 101081725 101083413 + 0.665311484316055 NA promoter-TSS (NM_001305982) promoter-TSS (NM_001305982) 4 NM_001305982 71743 Mm.182271 NM_027896 ENSMUSG00000001755 Coasy 1300003G02Rik|Dpck|Ppat|Ukr1 Coenzyme A synthase protein-coding common_peak1_120_997_-0.086329160701812_9.91973142498635_0.665311484316055 chr4 101174786 101176507 + 0.665311484316055 NA intron (NM_146145, intron 8 of 24) MADE2|DNA|TcMar-Mariner 89636 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_90_711_-0.103388388246351_9.42403923684322_0.665228727070011 chr1 43163116 43164616 + 0.665228727070011 NA promoter-TSS (NM_010212) promoter-TSS (NM_010212) 95 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_36_248_-0.18021828085667_7.86989279163975_0.665015353504182 chr1 173535131 173536487 + 0.665015353504182 NA 5' UTR (NM_001024721, exon 1 of 5) 5' UTR (NM_001024721, exon 1 of 5) 148 NM_001024721 545384 Mm.371698 NM_001024721 ENSMUSG00000070501 Ifi214 Pyhin-B|p214 interferon activated gene 214 protein-coding unique_peak2_31_160_0.191948696196907_7.42689122621307_0.664920918169805 chr10 93355325 93356773 + 0.664920918169805 NA Intergenic Intergenic 19817 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak1_31_160_0.191948696196907_7.42689122621307_0.664920918169805-3 chr8 35432081 35432792 + 0.664920918169805 NA Intergenic Intergenic 56695 NM_177741 244416 Mm.247126 NM_177741 ENSMUSG00000046794 Ppp1r3b 6430576E21|AW821953|GL|PTG protein phosphatase 1, regulatory (inhibitor) subunit 3B protein-coding common_peak2_31_160_0.191948696196907_7.42689122621307_0.664920918169805-2 chr7 44572515 44573437 + 0.664920918169805 NA intron (NM_008437, intron 1 of 8) (GA)n|Simple_repeat|Simple_repeat 531 NM_008437 16541 Mm.383181 NM_008437 ENSMUSG00000002204 Napsa KAP|Kdap|NAP1|SNAPA|pronapsin napsin A aspartic peptidase protein-coding common_peak2_31_160_0.191948696196907_7.42689122621307_0.664920918169805 chr13 73724903 73726261 + 0.664920918169805 NA Intergenic RMER6A|LTR|ERVK -24887 NM_028878 74338 Mm.271635 NM_028878 ENSMUSG00000021565 Slc6a19 4632401C08Rik|B<0>AT1 solute carrier family 6 (neurotransmitter transporter), member 19 protein-coding common_peak1_31_160_0.191948696196907_7.42689122621307_0.664920918169805 chr10 80824089 80824656 + 0.664920918169805 NA Intergenic Intergenic -2284 NM_001301034 18245 Mm.398119 NM_008753 ENSMUSG00000035242 Oaz1 AZ-1|AZ1|Antizyme|ODC-Az|Oaz ornithine decarboxylase antizyme 1 protein-coding common_peak1_31_160_0.191948696196907_7.42689122621307_0.664920918169805-2 chr7 27258143 27258721 + 0.664920918169805 NA promoter-TSS (NM_010950) promoter-TSS (NM_010950) -329 NM_010950 18223 Mm.458153 NM_010950 ENSMUSG00000063160 Numbl nbl numb-like protein-coding common_peak1_86_582_0.105445757465356_9.24007495193317_0.664822179838771 chr16 55894920 55896106 + 0.664822179838771 NA promoter-TSS (NM_001134457) promoter-TSS (NM_001134457) -234 NM_001134457 385658 Mm.310635 NM_001134457 ENSMUSG00000075033 Nxpe3 Fam55c|Gm1752|Gm611 neurexophilin and PC-esterase domain family, member 3 protein-coding common_peak2_399_3959_0.0411797219148369_11.9718745759244_0.664738585077809 chr4 137354992 137359048 + 0.664738585077809 NA intron (NM_001243769, intron 1 of 5) CpG 739 NM_009861 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak1_75_574_-0.113829320062134_9.11050348580067_0.664474921712104 chr1 59684893 59685751 + 0.664474921712104 NA intron (NM_018868, intron 1 of 14) intron (NM_018868, intron 1 of 14) 316 NM_018868 55989 Mm.220367 NM_018868 ENSMUSG00000026020 Nop58 MSSP|Nol5|SIK|nop5 NOP58 ribonucleoprotein protein-coding common_peak2_74_482_0.114270329453893_8.97301454356272_0.664339281384811 chr14 33446264 33447337 + 0.664339281384811 NA intron (NM_001310453, intron 1 of 11) CpG 358 NM_001310453 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak1_78_601_-0.111520585646385_9.17785938393651_0.664154584706372 chr14 65837118 65838024 + 0.664154584706372 NA intron (NM_145944, intron 1 of 8) CpG 269 NM_145944 67179 Mm.214576 NM_145944 ENSMUSG00000022035 Ccdc25 2610528H13Rik|NSrp70 coiled-coil domain containing 25 protein-coding common_peak2_53_384_-0.139894757556313_8.51876725680411_0.664067571301214 chr10 68221333 68223062 + 0.664067571301214 NA intron (NM_023598, intron 3 of 9) ORR1E|LTR|ERVL-MaLR 56529 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_321_3226_-0.0473686379416041_11.6322935435161_0.663892830919382 chr4 11155297 11158600 + 0.663892830919382 NA intron (NM_021897, intron 1 of 3) intron (NM_021897, intron 1 of 3) 507 NM_021897 60599 Mm.393018 NM_021897 ENSMUSG00000028211 Trp53inp1 2700057G22Rik|SIP|SIP18|SIP27|Stinp|Teap transformation related protein 53 inducible nuclear protein 1 protein-coding common_peak1_77_507_0.110871074022052_9.04412022378319_0.663860285059968 chr17 35896715 35897624 + 0.663860285059968 NA TTS (NM_001142744) TTS (NM_001142744) 209 NM_001033630 69662 Mm.260159 NM_001033630 ENSMUSG00000050705 2310061I04Rik - RIKEN cDNA 2310061I04 gene protein-coding unique_peak2_27_134_0.209749152967095_7.18169017353438_0.663789671701565-2 chr3 101280445 101281368 + 0.663789671701565 NA intron (NM_013486, intron 3 of 4) intron (NM_013486, intron 3 of 4) 7033 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding common_peak1_27_134_0.209749152967095_7.18169017353438_0.663789671701565 chr11 46461619 46462217 + 0.663789671701565 NA intron (NM_134250, intron 3 of 6) intron (NM_134250, intron 3 of 6) 6987 NM_134250 171285 Mm.72168 NM_134250 ENSMUSG00000020399 Havcr2 TIM-3|Tim3|Timd3 hepatitis A virus cellular receptor 2 protein-coding common_peak1_27_134_0.209749152967095_7.18169017353438_0.663789671701565-3 chr7 127129907 127130489 + 0.663789671701565 NA Intergenic Intergenic 7625 NR_110337 20737 Mm.283714 NM_009259 ENSMUSG00000051457 Spn A630014B01Rik|Cd43|Galgp|Ly-48|Ly48 sialophorin protein-coding common_peak2_27_134_0.209749152967095_7.18169017353438_0.663789671701565 chr18 75489440 75490190 + 0.663789671701565 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -24830 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA unique_peak2_27_134_0.209749152967095_7.18169017353438_0.663789671701565 chr11 11748491 11749921 + 0.663789671701565 NA intron (NM_001025597, intron 4 of 7) intron (NM_001025597, intron 4 of 7) 59029 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_27_134_0.209749152967095_7.18169017353438_0.663789671701565-2 chr13 101734040 101734510 + 0.663789671701565 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) 33942 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding unique_peak2_29_147_0.199203066968753_7.30905489911333_0.663717340407315 chr8 106149788 106150863 + 0.663717340407315 NA promoter-TSS (NM_133792) promoter-TSS (NM_133792) -74 NM_133792 192654 Mm.284770 NM_133792 ENSMUSG00000031903 Pla2g15 ACS|C87498|LLPL|Lpla2|Lypla3 phospholipase A2, group XV protein-coding common_peak1_29_147_0.199203066968753_7.30905489911333_0.663717340407315-2 chr2 58135180 58135786 + 0.663717340407315 NA intron (NM_139200, intron 7 of 7) intron (NM_139200, intron 7 of 7) 24639 NM_139200 227929 Mm.273905 NM_139200 ENSMUSG00000026832 Cytip A130053M09Rik|AI462064|C80816|Cbp|Cybr|Pscdbp cytohesin 1 interacting protein protein-coding common_peak1_29_147_0.199203066968753_7.30905489911333_0.663717340407315 chr2 18027505 18028135 + 0.663717340407315 NA non-coding (NR_028376, exon 2 of 2) non-coding (NR_028376, exon 2 of 2) 571 NR_028378 100034739 Mm.401643 NR_028378 Gm17762 - predicted gene, 17762 ncRNA common_peak2_186_1677_-0.0656093263377997_10.6797223372709_0.66359072331474 chr17 33908327 33910971 + 0.66359072331474 NA promoter-TSS (NM_001199733) promoter-TSS (NM_001199733) 48 NM_001199733 13163 Mm.271809 NM_007829 ENSMUSG00000002307 Daxx - Fas death domain-associated protein protein-coding common_peak2_193_1603_0.0644922480948456_10.6797045505023_0.66359072331474 chr12 25267230 25270957 + 0.66359072331474 NA Intergenic Intergenic 139919 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_219_1877_0.0595342931048535_10.9047484942062_0.663534744147891 chr11 79253378 79254950 + 0.663534744147891 NA intron (NM_019653, intron 1 of 8) CpG 531 NM_019653 78889 Mm.307022 NM_019653 ENSMUSG00000017677 Wsb1 1110056B13Rik|2700038M07Rik WD repeat and SOCS box-containing 1 protein-coding common_peak2_34_232_-0.182740430130746_7.77281592958891_0.663504155867753 chr15 77945174 77946676 + 0.663504155867753 NA intron (NM_001017983, intron 7 of 8) intron (NM_001017983, intron 7 of 8) 10797 NM_001168260 239554 Mm.295605 NM_001017983 ENSMUSG00000016552 Foxred2 A430097D04Rik|D15Bwg0759e|Gm304 FAD-dependent oxidoreductase domain containing 2 protein-coding common_peak1_40_221_0.167027398715319_7.87792956570777_0.663464639195705 chr7 120830535 120831354 + 0.663464639195705 NA Intergenic Intergenic -11887 NM_007908 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak1_99_695_0.0962963186603663_9.49109165517891_0.663414517620801 chr17 13682556 13684083 + 0.663414517620801 NA Intergenic Intergenic -77222 NM_010806 17356 Mm.59167 NM_010806 ENSMUSG00000068036 Afdn 5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin afadin, adherens junction formation factor protein-coding unique_peak2_20_130_-0.255948357738952_6.90544882266797_0.66336211152753 chr12 28803050 28803999 + 0.66336211152753 NA intron (NM_201357, intron 3 of 8) intron (NM_201357, intron 3 of 8) 51696 NM_201357 380752 Mm.273724 NM_201357 ENSMUSG00000036613 Tssc1 D12Ertd604e|Eipr1 tumor suppressing subtransferable candidate 1 protein-coding common_peak1_20_130_-0.255948357738952_6.90544882266797_0.66336211152753-2 chr6 135596185 135596718 + 0.66336211152753 NA Intergenic ORR1E|LTR|ERVL-MaLR -62462 NR_126088 75024 Mm.399147 NR_126088 ENSMUSG00000107396 4930425L21Rik 4930473P14Rik RIKEN cDNA 4930425L21 gene ncRNA unique_peak2_20_130_-0.255948357738952_6.90544882266797_0.66336211152753-2 chr2 11332155 11333399 + 0.66336211152753 NA Intergenic Intergenic -6712 NR_040369 100503147 Mm.91961 NR_040369 ENSMUSG00000086006 Gm13293 OTTMUSG00000011311 predicted gene 13293 ncRNA common_peak1_20_130_-0.255948357738952_6.90544882266797_0.66336211152753 chr6 56900905 56901346 + 0.66336211152753 NA intron (NM_001252374, intron 1 of 9) intron (NM_001252374, intron 1 of 9) 761 NM_001252374 107569 Mm.158936 NM_026004 ENSMUSG00000029780 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III protein-coding common_peak1_20_130_-0.255948357738952_6.90544882266797_0.66336211152753-3 chr8 33897467 33897932 + 0.66336211152753 NA intron (NM_001286168, intron 1 of 7) intron (NM_001286168, intron 1 of 7) 32164 NM_019733 19663 Mm.323997 NM_019733 ENSMUSG00000031586 Rbpms 2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes RNA binding protein gene with multiple splicing protein-coding common_peak1_48_343_-0.149388517791413_8.35157049580639_0.663318054915451 chr13 113549224 113550091 + 0.663318054915451 NA Intergenic ORR1D2|LTR|ERVL-MaLR -46813 NR_045501 70917 Mm.491036 NR_045501 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak1_61_452_-0.130072724125572_8.75833087798345_0.663225512446626 chr10 76468416 76469313 + 0.663225512446626 NA promoter-TSS (NM_019434) promoter-TSS (NM_019434) -107 NM_019434 54387 Mm.30098 NM_019434 ENSMUSG00000001150 Mcm3ap GANP|mKIAA0572 minichromosome maintenance complex component 3 associated protein protein-coding common_peak2_25_122_0.212906739301692_7.04896787499009_0.662774953187984-3 chr9 73240371 73241314 + 0.662774953187984 NA Intergenic Intergenic 127373 NM_198609 225215 Mm.379366 NM_198609 ENSMUSG00000032215 Rsl24d1 2410159K22Rik ribosomal L24 domain containing 1 protein-coding common_peak1_25_122_0.212906739301692_7.04896787499009_0.662774953187984-4 chr6 54952448 54953043 + 0.662774953187984 NA intron (NM_172729, intron 1 of 11) Lx9|LINE|L1 18916 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak1_25_122_0.212906739301692_7.04896787499009_0.662774953187984 chr2 29870443 29870928 + 0.662774953187984 NA intron (NM_207298, intron 1 of 11) intron (NM_207298, intron 1 of 11) 1191 NM_207298 99151 Mm.296336 NM_207298 ENSMUSG00000039787 Cercam 2600006K01Rik|AL024097|Ceecam1 cerebral endothelial cell adhesion molecule protein-coding unique_peak2_25_122_0.212906739301692_7.04896787499009_0.662774953187984 chr18 38589928 38590983 + 0.662774953187984 NA exon (NM_011898, exon 2 of 2) exon (NM_011898, exon 2 of 2) 10813 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty homolog 4 (Drosophila) protein-coding common_peak1_25_122_0.212906739301692_7.04896787499009_0.662774953187984-2 chr2 58107968 58108506 + 0.662774953187984 NA Intergenic Intergenic 51885 NM_139200 227929 Mm.273905 NM_139200 ENSMUSG00000026832 Cytip A130053M09Rik|AI462064|C80816|Cbp|Cybr|Pscdbp cytohesin 1 interacting protein protein-coding common_peak2_25_122_0.212906739301692_7.04896787499009_0.662774953187984 chr16 38476236 38477072 + 0.662774953187984 NA intron (NM_009855, intron 2 of 4) intron (NM_009855, intron 2 of 4) 17721 NM_009855 12519 Mm.89474 NM_009855 ENSMUSG00000075122 Cd80 B71|Cd28l|Ly-53|Ly53|MIC17|TSA1 CD80 antigen protein-coding common_peak2_25_122_0.212906739301692_7.04896787499009_0.662774953187984-2 chr4 123904979 123905723 + 0.662774953187984 NA intron (NM_019660, intron 2 of 4) CpG-10277 338 NM_019660 56309 Mm.446553 NM_019660 ENSMUSG00000028647 Mycbp 5730488M09Rik|AW552132|AW742590|Amy-1 MYC binding protein protein-coding common_peak1_25_122_0.212906739301692_7.04896787499009_0.662774953187984-3 chr4 156202672 156203184 + 0.662774953187984 NA promoter-TSS (NR_030671) promoter-TSS (NR_030671) -356 NR_030671 100382 Mm.461024 NR_030671 AW011738 - expressed sequence AW011738 ncRNA unique_peak2_25_122_0.212906739301692_7.04896787499009_0.662774953187984-2 chr9 116328804 116329895 + 0.662774953187984 NA Intergenic Intergenic -153986 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_16_69_0.274253244029206_6.26640963895957_0.662654265687252-8 chrX 98259903 98260334 + 0.662654265687252 NA intron (NM_013476, intron 2 of 7) intron (NM_013476, intron 2 of 7) 111361 NM_013476 11835 Mm.39005 NM_013476 ENSMUSG00000046532 Ar AW320017|Tfm androgen receptor protein-coding common_peak1_16_69_0.274253244029206_6.26640963895957_0.662654265687252 chr1 189866944 189867334 + 0.662654265687252 NA intron (NM_008976, intron 18 of 18) intron (NM_008976, intron 18 of 18) 55149 NM_026796 226830 Mm.156895 NM_026796 ENSMUSG00000026603 Smyd2 1110020E07Rik|4930402C15|KMT3C|Zmynd14 SET and MYND domain containing 2 protein-coding common_peak1_16_69_0.274253244029206_6.26640963895957_0.662654265687252-2 chr14 60740197 60740543 + 0.662654265687252 NA intron (NM_001310594, intron 1 of 9) RSINE1|SINE|B4 7466 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak1_16_69_0.274253244029206_6.26640963895957_0.662654265687252-7 chr5 33521580 33521938 + 0.662654265687252 NA Intergenic Intergenic -87669 NM_011320 672284 NM_011320 ENSMUSG00000029112 Nkx1-1 Nkx-1.1|Sax2 NK1 transcription factor related, locus 1 (Drosophila) protein-coding common_peak1_16_69_0.274253244029206_6.26640963895957_0.662654265687252-4 chr17 28736089 28736577 + 0.662654265687252 NA intron (NM_001168508, intron 8 of 11) intron (NM_001168508, intron 8 of 11) -32984 NM_011950 26415 Mm.27970 NM_011950 ENSMUSG00000004864 Mapk13 SAPK4|Serk4 mitogen-activated protein kinase 13 protein-coding common_peak1_16_69_0.274253244029206_6.26640963895957_0.662654265687252-3 chr15 96695377 96695806 + 0.662654265687252 NA intron (NM_175121, intron 4 of 15) intron (NM_175121, intron 4 of 15) 4107 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_16_69_0.274253244029206_6.26640963895957_0.662654265687252-6 chr3 137853394 137853801 + 0.662654265687252 NA Intergenic MTEa|LTR|ERVL-MaLR -10890 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak1_16_69_0.274253244029206_6.26640963895957_0.662654265687252-5 chr3 20105013 20105435 + 0.662654265687252 NA intron (NM_009210, intron 18 of 24) intron (NM_009210, intron 18 of 24) 46933 NR_105047 20585 Mm.209650 NM_009210 ENSMUSG00000002428 Hltf AF010600|BC057116|P113|Smarca3|Snf2l3 helicase-like transcription factor protein-coding common_peak2_295_2720_0.0496993435207997_11.4347709130101_0.662541788203176 chr13 59821035 59824009 + 0.662541788203176 NA intron (NM_153538, intron 1 of 27) intron (NM_153538, intron 1 of 27) 625 NM_153538 214290 Mm.233082 NM_153538 ENSMUSG00000035248 Zcchc6 6030448M23Rik|AA420405 zinc finger, CCHC domain containing 6 protein-coding common_peak2_162_1423_-0.0718889870450283_10.4397889374439_0.662509166630039 chr17 24719084 24721637 + 0.662509166630039 NA promoter-TSS (NR_027900) promoter-TSS (NR_027900) 297 NM_008503 16898 Mm.157452 NM_008503 ENSMUSG00000044533 Rps2 Llrep3|S4 ribosomal protein S2 protein-coding common_peak2_128_1076_-0.0829408481369747_10.0313321104757_0.662229081415681 chr4 140904850 140906955 + 0.662229081415681 NA promoter-TSS (NM_008812) promoter-TSS (NM_008812) -458 NM_008812 18600 Mm.2296 NM_008812 ENSMUSG00000028927 Padi2 Pdi|Pdi2|mKIAA0994 peptidyl arginine deiminase, type II protein-coding common_peak2_55_331_0.138137629857356_8.4441082462756_0.661837675219785-2 chr9 97309353 97311106 + 0.661837675219785 NA Intergenic MIRb|SINE|MIR 59729 NM_030219 78911 Mm.108347 NM_030219 ENSMUSG00000032451 Trim42 4930486B16Rik tripartite motif-containing 42 protein-coding common_peak2_55_331_0.138137629857356_8.4441082462756_0.661837675219785 chr12 80462655 80463894 + 0.661837675219785 NA 5' UTR (NM_133798, exon 1 of 9) 5' UTR (NM_133798, exon 1 of 9) 179 NM_133798 97827 Mm.206631 NM_133798 ENSMUSG00000032705 Exd2 4930539P14Rik|C85658|Exdl2 exonuclease 3'-5' domain containing 2 protein-coding common_peak1_165_1318_0.0708893311031602_10.4006735148031_0.661693631429056 chr9 56949900 56951662 + 0.661693631429056 NA promoter-TSS (NM_178374) promoter-TSS (NM_178374) -143 NM_178374 66069 Mm.220984 NM_178374 ENSMUSG00000055334 Snupn 0610031A09Rik|Rnut1|Snupn1 snurportin 1 protein-coding common_peak2_64_478_-0.126967325403283_8.84039818303454_0.661314177009651 chr9 104062476 104064263 + 0.661314177009651 NA promoter-TSS (NM_175324) promoter-TSS (NM_175324) -248 NM_025692 66663 Mm.224935 NM_025692 ENSMUSG00000032557 Uba5 5730525G14Rik|AW240750|Ube1dc1 ubiquitin-like modifier activating enzyme 5 protein-coding common_peak2_147_1267_-0.0753307565552834_10.2706736518618_0.661165481476475 chr12 59066101 59067876 + 0.661165481476475 NA promoter-TSS (NM_008891) promoter-TSS (NM_008891) 69 NM_008891 18949 Mm.22347 NM_008891 ENSMUSG00000020994 Pnn AU045199|D12Ertd512e pinin protein-coding common_peak2_32_217_-0.190864377116046_7.6727521362189_0.661057075344322 chr10 111298025 111299187 + 0.661057075344322 NA promoter-TSS (NM_027914) promoter-TSS (NM_027914) -73 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding common_peak1_56_409_-0.134981379955272_8.61198940952781_0.661032951739256 chr1 164077245 164078128 + 0.661032951739256 NA intron (NM_011346, intron 8 of 8) intron (NM_011346, intron 8 of 8) 15610 NM_001164059 20343 Mm.1461 NM_011346 ENSMUSG00000026581 Sell AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1 selectin, lymphocyte protein-coding common_peak1_56_409_-0.134981379955272_8.61198940952781_0.661032951739256-2 chr8 69917845 69919083 + 0.661032951739256 NA intron (NM_001286450, intron 3 of 12) intron (NM_001286450, intron 3 of 12) -15906 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak2_56_409_-0.134981379955272_8.61198940952781_0.661032951739256 chr19 24224305 24225905 + 0.661032951739256 NA promoter-TSS (NM_011597) promoter-TSS (NM_011597) -79 NM_011597 21873 Mm.104744 NM_011597 ENSMUSG00000024812 Tjp2 ZO-2 tight junction protein 2 protein-coding common_peak2_93_643_0.0988265204977576_9.3803301383635_0.660953246057532 chr16 55894623 55896406 + 0.660953246057532 NA promoter-TSS (NM_001134457) promoter-TSS (NM_001134457) -235 NM_001134457 385658 Mm.310635 NM_001134457 ENSMUSG00000075033 Nxpe3 Fam55c|Gm1752|Gm611 neurexophilin and PC-esterase domain family, member 3 protein-coding common_peak1_93_643_0.0988265204977576_9.3803301383635_0.660953246057532 chr4 148087337 148088383 + 0.660953246057532 NA intron (NM_001301281, intron 1 of 4) CpG 204 NM_009642 11610 Mm.46247 NM_009642 ENSMUSG00000029007 Agtrap 3300002E14Rik|AT1R|Atrap|D4Wsu124e angiotensin II, type I receptor-associated protein protein-coding common_peak2_104_842_-0.0938085902652634_9.67248452580945_0.66087407151644 chr5 107948739 107951643 + 0.66087407151644 NA intron (NM_026062, intron 1 of 4) intron (NM_026062, intron 1 of 4) 36886 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_66_417_0.12318456806884_8.7689514161153_0.660731756499809 chr2 127721889 127722972 + 0.660731756499809 NA intron (NM_145532, intron 1 of 3) intron (NM_145532, intron 1 of 3) 7467 NM_145532 228576 Mm.133036 NM_145532 ENSMUSG00000027377 Mall BC012256|BENE mal, T cell differentiation protein-like protein-coding common_peak1_443_4508_0.0385509950998859_12.1578672921875_0.660513505451515 chr2 101795365 101798842 + 0.660513505451515 NA intron (NM_001110849, intron 2 of 9) CpG 604 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_225_1942_0.0580616237734137_10.9531009974721_0.660374802872204 chr7 46919141 46920820 + 0.660374802872204 NA promoter-TSS (NM_021884) promoter-TSS (NM_021884) -50 NM_021884 22088 Mm.241334 NM_021884 ENSMUSG00000014402 Tsg101 AI255943|CC2 tumor susceptibility gene 101 protein-coding common_peak1_497_5199_0.0359567885921734_12.3622743022119_0.660353131974215 chr7 90129033 90132520 + 0.660353131974215 NA promoter-TSS (NR_046007) promoter-TSS (NR_046007) 544 NM_001252520 233489 Mm.235175 NM_146194 ENSMUSG00000039361 Picalm CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114 phosphatidylinositol binding clathrin assembly protein protein-coding common_peak1_175_1559_-0.0676956374965911_10.5734824950013_0.660313987004839 chr2 78959623 78962550 + 0.660313987004839 NA Intergenic Intergenic 92039 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_38_207_0.172503731466769_7.78669158387448_0.660212271718387 chr2 68470604 68471393 + 0.660212271718387 NA intron (NM_016866, intron 1 of 17) CpG 983 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding common_peak1_15_96_-0.30365957906196_6.44808305265615_0.66019930050255-2 chr4 43000630 43001033 + 0.66019930050255 NA promoter-TSS (NM_009503) promoter-TSS (NM_009503) -324 NM_009503 269523 Mm.245976 NM_009503 ENSMUSG00000028452 Vcp 3110001E05|CDC48|p97|p97/VCP valosin containing protein protein-coding common_peak1_15_96_-0.30365957906196_6.44808305265615_0.66019930050255 chr3 84126286 84126746 + 0.66019930050255 NA intron (NM_029797, intron 4 of 7) intron (NM_029797, intron 4 of 7) 29270 NM_029797 76915 Mm.274829 NM_029797 ENSMUSG00000033752 Mnd1 2610034E18Rik|AI591601|Gaj meiotic nuclear divisions 1 protein-coding common_peak2_15_96_-0.30365957906196_6.44808305265615_0.66019930050255 chr5 125054831 125055627 + 0.66019930050255 NA intron (NM_001253904, intron 18 of 47) intron (NM_001253904, intron 18 of 47) 51754 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak2_22_144_-0.241448285921424_7.05918494705422_0.660059622367254 chr13 113417566 113418325 + 0.660059622367254 NA Intergenic Intergenic 84899 NR_045501 70917 Mm.491036 NR_045501 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA common_peak1_22_144_-0.241448285921424_7.05918494705422_0.660059622367254-3 chrX 134756559 134757138 + 0.660059622367254 NA promoter-TSS (NR_106061) promoter-TSS (NR_106061) 280 NM_027870 71703 Mm.67949 NM_027870 ENSMUSG00000049047 Armcx3 1200004E24Rik|AI450003|ALEX3 armadillo repeat containing, X-linked 3 protein-coding common_peak1_22_144_-0.241448285921424_7.05918494705422_0.660059622367254-2 chr6 87915482 87915947 + 0.660059622367254 NA intron (NM_173737, intron 2 of 6) B3|SINE|B2 1738 NM_173737 232210 Mm.246241 NM_173737 ENSMUSG00000030060 Hmces 8430410A17Rik|C85376 5-hydroxymethylcytosine (hmC) binding, ES cell specific protein-coding common_peak1_22_144_-0.241448285921424_7.05918494705422_0.660059622367254 chr2 21205873 21206370 + 0.660059622367254 NA promoter-TSS (NM_027728) promoter-TSS (NM_027728) 397 NM_177588 208967 Mm.268841 NM_177588 ENSMUSG00000048550 Thnsl1 AW413632 threonine synthase-like 1 (bacterial) protein-coding common_peak1_196_1785_-0.0634097484959231_10.7708114908733_0.660028675100705 chr11 60776425 60778193 + 0.660028675100705 NA promoter-TSS (NM_175491) promoter-TSS (NM_175491) 56 NM_009410 21975 Mm.10708 NM_009410 ENSMUSG00000002814 Top3a - topoisomerase (DNA) III alpha protein-coding common_peak2_50_294_0.143099632878252_8.27612096068833_0.659832581737227 chr7 25297084 25298365 + 0.659832581737227 NA intron (NM_008776, intron 1 of 5) CpG-12842 231 NM_008776 18476 Mm.597 NM_008776 ENSMUSG00000005447 Pafah1b3 Pafahg|mus[g] platelet-activating factor acetylhydrolase, isoform 1b, subunit 3 protein-coding common_peak1_69_441_0.120155466318458_8.84798029255066_0.659748486491384 chr8 11558213 11558976 + 0.659748486491384 NA intron (NM_001302459, intron 1 of 1) CpG-13832 184 NM_001302459 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding common_peak1_274_2666_-0.0516055042866892_11.3551993574076_0.659534507215705 chr2 178289080 178291766 + 0.659534507215705 NA intron (NM_001177789, intron 7 of 12) L1MA7|LINE|L1 97339 NM_001007154 74189 Mm.44413 NM_028806 ENSMUSG00000027525 Phactr3 1500003N10Rik|4930415A02Rik|H17739|Scapin1|Scapinin|mKIAA4224 phosphatase and actin regulator 3 protein-coding common_peak2_274_2666_-0.0516055042866892_11.3551993574076_0.659534507215705 chr9 7835665 7838370 + 0.659534507215705 NA promoter-TSS (NM_007465) promoter-TSS (NM_007465) 40 NM_007465 11797 Mm.335659 NM_007465 ENSMUSG00000057367 Birc2 AW146227|Api1|Api2|Birc3|C-IAP1|C330006D17Rik|HIAP1|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF48|cIAP1|cIAP2|mcIAP1 baculoviral IAP repeat-containing 2 protein-coding common_peak1_30_202_-0.19865371245087_7.56600906095974_0.659382548671295-3 chr18 39017906 39018586 + 0.659382548671295 NA intron (NM_175164, intron 1 of 22) L2a|LINE|L2 25101 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding common_peak1_30_202_-0.19865371245087_7.56600906095974_0.659382548671295-2 chr17 23676978 23677572 + 0.659382548671295 NA intron (NM_013749, intron 1 of 3) CpG 174 NM_001161746 27279 Mm.28518 NM_013749 ENSMUSG00000023905 Tnfrsf12a AI255180|C87282|Fn14|HPIP|TWEAK-R|TweakR tumor necrosis factor receptor superfamily, member 12a protein-coding common_peak1_30_202_-0.19865371245087_7.56600906095974_0.659382548671295 chr16 92787182 92787808 + 0.659382548671295 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 38579 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_30_202_-0.19865371245087_7.56600906095974_0.659382548671295-5 chr9 65460866 65461506 + 0.659382548671295 NA intron (NM_138584, intron 1 of 8) CpG 249 NM_138584 27965 Mm.272475 NM_138584 ENSMUSG00000032388 Spg21 ACP33|BM-019|C78576|D9Wsu18e|GL010|MAST spastic paraplegia 21 homolog (human) protein-coding common_peak1_30_202_-0.19865371245087_7.56600906095974_0.659382548671295-4 chr8 10481133 10481840 + 0.659382548671295 NA intron (NM_001081397, intron 23 of 35) intron (NM_001081397, intron 23 of 35) 327563 NM_001081397 244281 Mm.422761 NM_001081397 ENSMUSG00000039057 Myo16 BM140241|C230040D10Rik|Gm1105|NYAP3|mKIAA0865 myosin XVI protein-coding common_peak1_178_1450_0.0667127813560242_10.5361881947448_0.659319562335365 chr19 8995977 8998472 + 0.659319562335365 NA intron (NM_009643, intron 1 of 4) intron (NM_009643, intron 1 of 4) 7940 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_26_172_-0.21242066079713_7.32841789723816_0.659190063365171-2 chr7 114480898 114481598 + 0.659190063365171 NA intron (NM_011055, intron 1 of 15) B1F2|SINE|Alu 65994 NM_011055 18576 Mm.430730 NM_011055 ENSMUSG00000030671 Pde3b 9830102A01Rik|AI847709 phosphodiesterase 3B, cGMP-inhibited protein-coding common_peak1_26_172_-0.21242066079713_7.32841789723816_0.659190063365171 chr4 32247832 32248401 + 0.659190063365171 NA Intergenic Intergenic -169319 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_174_1409_0.0680718541156988_10.495515374344_0.659165243936844 chr9 80279922 80283735 + 0.659165243936844 NA intron (NM_001039546, intron 22 of 32) intron (NM_001039546, intron 22 of 32) 116794 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding common_peak1_73_556_-0.115137554942265_9.0639647398689_0.659110516145205 chr11 108343004 108344595 + 0.659110516145205 NA promoter-TSS (NM_011101) promoter-TSS (NM_011101) 89 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_100_704_0.095368746319302_9.50916382044581_0.65893586438379 chr8 35678565 35681109 + 0.65893586438379 NA TTS (NM_001081279) TTS (NM_001081279) -90817 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_24_158_-0.226867763147972_7.19944907371037_0.658844856848516-2 chr14 20640348 20640847 + 0.658844856848516 NA Intergenic Intergenic 15943 NM_021508 59011 Mm.439911 NM_021508 ENSMUSG00000068697 Myoz1 2310001N11Rik|AV090278|FATZ|Myoz myozenin 1 protein-coding common_peak1_24_158_-0.226867763147972_7.19944907371037_0.658844856848516 chr13 45413770 45414273 + 0.658844856848516 NA Intergenic ORR1E|LTR|ERVL-MaLR 24279 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding unique_peak2_24_158_-0.226867763147972_7.19944907371037_0.658844856848516 chr11 109671082 109672454 + 0.658844856848516 NA Intergenic Intergenic 20847 NM_001313976 19084 Mm.30039 NM_021880 ENSMUSG00000020612 Prkar1a 1300018C22Rik|RIalpha|Tse-1|Tse1 protein kinase, cAMP dependent regulatory, type I, alpha protein-coding common_peak1_28_187_-0.205925537165069_7.4516260830951_0.658672895631423-2 chr15 50889636 50890057 + 0.658672895631423 NA promoter-TSS (NR_035444) promoter-TSS (NR_035444) 195 NM_032000 83925 Mm.30466 NM_032000 ENSMUSG00000038679 Trps1 AI115454|AI447310|D15Ertd586e trichorhinophalangeal syndrome I (human) protein-coding common_peak1_28_187_-0.205925537165069_7.4516260830951_0.658672895631423-3 chr4 136171719 136172182 + 0.658672895631423 NA promoter-TSS (NM_177733) promoter-TSS (NM_177733) -324 NM_177733 242705 Mm.307932 NM_177733 ENSMUSG00000018983 E2f2 E2F-2 E2F transcription factor 2 protein-coding common_peak1_28_187_-0.205925537165069_7.4516260830951_0.658672895631423 chr11 88049161 88049708 + 0.658672895631423 NA exon (NM_173374, exon 4 of 4) exon (NM_173374, exon 4 of 4) 2061 NM_173374 110809 Mm.391719 NM_173374 ENSMUSG00000018379 Srsf1 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1 serine/arginine-rich splicing factor 1 protein-coding common_peak2_76_583_-0.113103018106951_9.13327304982654_0.658646573606243 chr11 108342708 108344635 + 0.658646573606243 NA 5' UTR (NM_011101, exon 1 of 17) 5' UTR (NM_011101, exon 1 of 17) 217 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_84_566_0.104436922910264_9.19942338639736_0.658593939255395 chr4 138434120 138435327 + 0.658593939255395 NA promoter-TSS (NM_026689) promoter-TSS (NM_026689) 51 NM_026689 68350 Mm.103413 NM_026689 ENSMUSG00000041241 Mul1 0610009K11Rik|AV000801|Gide mitochondrial ubiquitin ligase activator of NFKB 1 protein-coding common_peak2_84_566_0.104436922910264_9.19942338639736_0.658593939255395 chr8 35375601 35377409 + 0.658593939255395 NA intron (NM_177741, intron 1 of 1) CpG 764 NM_177741 244416 Mm.247126 NM_177741 ENSMUSG00000046794 Ppp1r3b 6430576E21|AW821953|GL|PTG protein phosphatase 1, regulatory (inhibitor) subunit 3B protein-coding common_peak2_78_515_0.110871835690062_9.06666317326829_0.658442112994841 chr19 7039106 7040131 + 0.658442112994841 NA intron (NM_016737, intron 1 of 13) CpG 408 NM_016737 20867 Mm.258633 NM_016737 ENSMUSG00000024966 Stip1 Hop|Sti1|p60 stress-induced phosphoprotein 1 protein-coding unique_peak2_12_76_-0.337977607240324_6.09779773707474_0.658374650198586-2 chr7 99182648 99183208 + 0.658374650198586 NA promoter-TSS (NM_026384) promoter-TSS (NM_026384) -215 NM_026384 67800 Mm.180189 NM_026384 ENSMUSG00000030747 Dgat2 0610010B06Rik|ARAT|DGAT-2 diacylglycerol O-acyltransferase 2 protein-coding common_peak1_12_76_-0.337977607240324_6.09779773707474_0.658374650198586-2 chr8 128551708 128551978 + 0.658374650198586 NA Intergenic Intergenic -133811 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_12_76_-0.337977607240324_6.09779773707474_0.658374650198586 chr8 121590012 121590342 + 0.658374650198586 NA promoter-TSS (NM_026160) promoter-TSS (NM_026160) -291 NM_026160 67443 Mm.28357 NM_026160 ENSMUSG00000031812 Map1lc3b 1010001C15Rik|Atg8|LC3b|Map1lc3 microtubule-associated protein 1 light chain 3 beta protein-coding unique_peak2_12_76_-0.337977607240324_6.09779773707474_0.658374650198586 chr13 73732398 73733018 + 0.658374650198586 NA Intergenic Intergenic -30989 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak2_422_4245_0.0395114638272069_12.071644387819_0.658228277664487 chr17 35261582 35265866 + 0.658228277664487 NA intron (NM_001267808, intron 6 of 10) CpG-6316 601 NM_001267808 14980 Mm.439675 NM_001267808 H2-L H-2L histocompatibility 2, D region locus L protein-coding common_peak2_59_435_-0.132915580992867_8.70172653428049_0.658019672500894 chr11 96034257 96035610 + 0.658019672500894 NA promoter-TSS (NM_033568) promoter-TSS (NM_033568) 16 NM_033568 27681 Mm.372235 NM_033568 ENSMUSG00000006058 Snf8 D11Moh34 SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) protein-coding common_peak1_204_1719_0.0613560023542874_10.7788708507666_0.657985107476899 chr17 29488840 29490581 + 0.657985107476899 NA Intergenic Intergenic -1335 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_160_1401_-0.0712737206516447_10.4176337736848_0.657472951504855 chr7 4653184 4654950 + 0.657472951504855 NA intron (NM_172894, intron 1 of 23) intron (NM_172894, intron 1 of 23) 4883 NM_172894 243819 Mm.258670 NM_172894 ENSMUSG00000052296 Ppp6r1 2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115 protein phosphatase 6, regulatory subunit 1 protein-coding common_peak1_97_678_0.0962207838523081_9.45537815617089_0.657443635553847 chr5 138116387 138117625 + 0.657443635553847 NA 5' UTR (NM_011757, exon 1 of 5) 5' UTR (NM_011757, exon 1 of 5) 101 NM_001044705 22697 Mm.2760 NM_011757 ENSMUSG00000037017 Zscan21 AI326272|CTfin51|RU49|Zfp-38|Zfp38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding common_peak1_39_271_-0.169716302433207_8.00260469003373_0.657205863152896 chr11 51872617 51873385 + 0.657205863152896 NA Intergenic B3|SINE|B2 -15520 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak2_39_271_-0.169716302433207_8.00260469003373_0.657205863152896 chr19 56393479 56394761 + 0.657205863152896 NA Intergenic Intergenic -3009 NM_007611 12369 Mm.35687 NM_007611 ENSMUSG00000025076 Casp7 AI314680|CMH-1|ICE-IAP3|Mch3|caspase-7|mCASP-7 caspase 7 protein-coding common_peak1_114_830_0.0878617242014847_9.74263552887109_0.657167739278812 chr3 153912303 153913655 + 0.657167739278812 NA promoter-TSS (NR_028096) promoter-TSS (NR_028096) -13 NR_028094 19352 Mm.277831 NM_011231 ENSMUSG00000038975 Rabggtb - Rab geranylgeranyl transferase, b subunit protein-coding common_peak1_53_316_0.140480847886543_8.37857945408268_0.656775101816424 chr4 63544726 63545420 + 0.656775101816424 NA intron (NM_024173, intron 1 of 2) CpG 308 NM_024173 66290 Mm.371615 NM_024173 ENSMUSG00000039105 Atp6v1g1 1810024D14Rik|AA960677|ATP6J|Atp6g1|VAG1|Vma10 ATPase, H+ transporting, lysosomal V1 subunit G1 protein-coding common_peak1_62_460_-0.127013780477556_8.78511605019056_0.656650964380956 chr8 84845893 84846962 + 0.656650964380956 NA intron (NM_007591, intron 1 of 8) intron (NM_007591, intron 1 of 8) 504 NM_007591 12317 Mm.1971 NM_007591 ENSMUSG00000003814 Calr CRT|Calregulin calreticulin protein-coding common_peak1_13_53_0.305064936668102_5.90741997049752_0.656512819423962 chr13 32908485 32908876 + 0.656512819423962 NA Intergenic L1_Mur3|LINE|L1 -10540 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding common_peak2_61_378_0.12724047774957_8.62967427704588_0.656484305181593 chr11 64036854 64038520 + 0.656484305181593 NA intron (NM_178379, intron 4 of 6) intron (NM_178379, intron 4 of 6) 41785 NM_178379 70383 Mm.340211 NM_178379 ENSMUSG00000042148 Cox10 2410004F01Rik|AU042636 cytochrome c oxidase assembly protein 10 protein-coding common_peak1_330_3128_0.045906301421148_11.6344390939515_0.656377088071537 chr7 73536666 73539740 + 0.656377088071537 NA intron (NM_001081345, intron 2 of 38) intron (NM_001081345, intron 2 of 38) 3543 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak2_94_652_0.0975306087287802_9.39970448591082_0.656155872382223 chr17 66122463 66124592 + 0.656155872382223 NA promoter-TSS (NM_001003919) promoter-TSS (NM_001003919) 7 NM_001003919 320209 Mm.259605 NM_001003919 ENSMUSG00000035842 Ddx11 4732462I11Rik|CHL1|CHLR1|KRG2|essa15a DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 protein-coding common_peak1_18_80_0.260514200512266_6.47010710314076_0.656128265330106-4 chr9 107769484 107770053 + 0.656128265330106 NA intron (NM_148930, intron 1 of 24) intron (NM_148930, intron 1 of 24) 1234 NM_148930 83486 Mm.259197 NM_148930 ENSMUSG00000032580 Rbm5 D030069N10Rik RNA binding motif protein 5 protein-coding unique_peak2_18_80_0.260514200512266_6.47010710314076_0.656128265330106-3 chr7 80293692 80294291 + 0.656128265330106 NA promoter-TSS (NM_145150) promoter-TSS (NM_145150) -460 NM_145150 233406 Mm.227274 NM_145150 ENSMUSG00000038943 Prc1 D7Ertd348e protein regulator of cytokinesis 1 protein-coding common_peak1_18_80_0.260514200512266_6.47010710314076_0.656128265330106 chr5 107926716 107927298 + 0.656128265330106 NA intron (NM_026062, intron 1 of 4) Lx9|LINE|L1 26479 NM_016980 100503670 Mm.277897 NM_016980 ENSMUSG00000058558 Rpl5 U21RNA ribosomal protein L5 protein-coding common_peak1_18_80_0.260514200512266_6.47010710314076_0.656128265330106-2 chr5 115167380 115167841 + 0.656128265330106 NA Intergenic Intergenic -9434 NM_175403 109154 Mm.153963 NM_175403 ENSMUSG00000048578 Mlec 2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152 malectin protein-coding unique_peak2_18_80_0.260514200512266_6.47010710314076_0.656128265330106 chr10 118804840 118805633 + 0.656128265330106 NA Intergenic Intergenic 63667 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_18_80_0.260514200512266_6.47010710314076_0.656128265330106-3 chr6 125097621 125098059 + 0.656128265330106 NA TTS (NR_106012) TTS (NR_106012) 816 NR_106012 102466272 NR_106012 ENSMUSG00000098762 Mir7045 Gm27758|mmu-mir-7045 microRNA 7045 ncRNA unique_peak2_18_80_0.260514200512266_6.47010710314076_0.656128265330106-4 chr9 21146348 21146954 + 0.656128265330106 NA intron (NM_016742, intron 1 of 7) intron (NM_016742, intron 1 of 7) 3255 NM_016742 12539 Mm.32331 NM_016742 ENSMUSG00000019471 Cdc37 p50|p50Cdc37 cell division cycle 37 protein-coding unique_peak2_18_80_0.260514200512266_6.47010710314076_0.656128265330106-2 chr3 84714572 84715280 + 0.656128265330106 NA Intergenic Intergenic 48734 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding common_peak2_43_243_0.155672716317421_8.0085736957216_0.655821188092792 chr5 23674758 23676155 + 0.655821188092792 NA Intergenic CpG 37211 NR_038090 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak2_130_1095_-0.0809448211136541_10.0575596724037_0.655786516459591 chr1 72243345 72245257 + 0.655786516459591 NA Intergenic U2|snRNA|snRNA -31994 NM_001005423 381269 Mm.422636 NM_001005423 ENSMUSG00000039395 Mreg Gm974|Wdt2|dsu melanoregulin protein-coding common_peak1_198_1807_-0.0631971685677701_10.7885803781313_0.655563330974128 chr10 81132510 81134595 + 0.655563330974128 NA Intergenic B1_Mur4|SINE|Alu -2719 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak1_48_279_0.147593219965717_8.20307962692783_0.655486614104205 chr11 115339043 115339915 + 0.655486614104205 NA exon (NM_027132, exon 2 of 7) exon (NM_027132, exon 2 of 7) 4745 NM_027132 69602 Mm.101844 NM_027132 ENSMUSG00000018862 Otop3 2310011E08Rik otopetrin 3 protein-coding common_peak2_310_2894_0.0477517582574656_11.5232235120053_0.655358651142018 chr9 37229193 37234046 + 0.655358651142018 NA 3' UTR (NM_020258, exon 18 of 18) 3' UTR (NM_020258, exon 18 of 18) 23303 NM_001310096 66279 Mm.41451 NM_025464 ENSMUSG00000032121 Tmem218 1810021J13Rik|AV004931 transmembrane protein 218 protein-coding common_peak1_102_823_-0.0949526434064794_9.63902420547998_0.655196926446281 chr17 6978719 6979745 + 0.655196926446281 NA intron (NM_026611, intron 1 of 8) intron (NM_026611, intron 1 of 8) 372 NM_026611 68195 Mm.181237 NM_026611 ENSMUSG00000094724 Rnaset2b 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2B protein-coding common_peak2_425_4283_0.0391636084364002_12.0843245689685_0.655102339156545 chr10 81429022 81435024 + 0.655102339156545 NA Intergenic B1F|SINE|Alu -4850 NM_026756 18029 Mm.426936 NM_008688 ENSMUSG00000055053 Nfic 1110019L22Rik|1500041O16Rik|AA589446|AI746521|NF1-C nuclear factor I/C protein-coding common_peak1_91_626_0.0993637936641836_9.34200352963413_0.655097630684611 chr9 124312161 124312978 + 0.655097630684611 NA 5' UTR (NM_001243119, exon 1 of 4) 5' UTR (NM_001243119, exon 1 of 4) 125 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding common_peak2_134_1135_-0.079433965786766_10.1100301366113_0.654797475040608 chr14 99045167 99047145 + 0.654797475040608 NA promoter-TSS (NM_175245) promoter-TSS (NM_175245) -20 NM_175245 76789 Mm.38912 NM_175245 ENSMUSG00000033186 Mzt1 2410129H14Rik|AI120158|Mozart1 mitotic spindle organizing protein 1 protein-coding common_peak1_210_1782_0.0605083515139686_10.830345163382_0.654658662614888 chr2 25141847 25145039 + 0.654658662614888 NA Intergenic Intergenic -37315 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding unique_peak2_49_351_-0.146804115314556_8.38602956098002_0.654646342747648 chr14 54576817 54578611 + 0.654646342747648 NA promoter-TSS (NM_010590) promoter-TSS (NM_010590) -53 NM_010590 16475 Mm.100253 NM_010590 ENSMUSG00000022178 Ajuba Jub ajuba LIM protein protein-coding common_peak1_37_255_-0.173023485416754_7.91348825729162_0.654431068074868 chr10 127120588 127121270 + 0.654431068074868 NA intron (NM_001171026, intron 1 of 14) intron (NM_001171026, intron 1 of 14) 231 NM_177614 216440 Mm.295246 NM_177614 ENSMUSG00000040462 Os9 4632413K17Rik|AU022351 amplified in osteosarcoma protein-coding common_peak1_68_512_-0.120219695360259_8.94270516792692_0.654212247495994 chr16 11254438 11254934 + 0.654212247495994 NA promoter-TSS (NR_035466) promoter-TSS (NR_035466) -241 NR_035466 100316833 NR_035466 ENSMUSG00000088544 Mir1945 mir-1945|mmu-mir-1945 microRNA 1945 ncRNA common_peak1_172_1389_0.0683413638816788_10.4750398495517_0.653870614214059 chr10 111009320 111010743 + 0.653870614214059 NA promoter-TSS (NM_172554) promoter-TSS (NM_172554) 35 NM_172554 320150 Mm.339281 NM_172554 ENSMUSG00000035798 Zdhhc17 A230053P19Rik|BB187739|D130071N24Rik|Hip14 zinc finger, DHHC domain containing 17 protein-coding common_peak1_57_417_-0.132083506381958_8.64131737888991_0.653809894106627 chr1 134955184 134956179 + 0.653809894106627 NA exon (NM_001081307, exon 1 of 24) exon (NM_001081307, exon 1 of 24) 259 NM_001081307 329251 Mm.188709 NM_001081307 ENSMUSG00000073557 Ppp1r12b 1810037O03Rik|9530009M10Rik|AI132431|Mypt2 protein phosphatase 1, regulatory (inhibitor) subunit 12B protein-coding common_peak1_221_2060_-0.058598310988204_10.9798296340452_0.653790223817841 chr4 134852627 134854518 + 0.653790223817841 NA promoter-TSS (NM_025382) promoter-TSS (NM_025382) -227 NM_025382 66146 Mm.99793 NM_025382 ENSMUSG00000028826 Tmem57 1110007C24Rik|9230118A01Rik|AI317300|AI606104|C61 transmembrane protein 57 protein-coding unique_peak2_34_180_0.181599827440328_7.59064580080337_0.653789900548588 chr1 54438406 54439494 + 0.653789900548588 NA promoter-TSS (NM_001033194) promoter-TSS (NM_001033194) 76 NM_001033194 98488 Mm.25856 NM_001033194 ENSMUSG00000041303 Gtf3c3 TF3C-gamma|TFIIIC102 general transcription factor IIIC, polypeptide 3 protein-coding common_peak1_34_180_0.181599827440328_7.59064580080337_0.653789900548588 chr17 88529405 88530007 + 0.653789900548588 NA promoter-TSS (NM_028658) promoter-TSS (NM_028658) -418 NM_028658 73825 Mm.271817 NM_028658 ENSMUSG00000034709 Ppp1r21 1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1 protein phosphatase 1, regulatory subunit 21 protein-coding common_peak2_206_1740_0.0610293487489777_10.7962151620256_0.653768456269911 chr5 139196229 139198750 + 0.653768456269911 NA Intergenic Intergenic -3148 NM_001256115 77053 Mm.210845 NM_024451 ENSMUSG00000036817 Sun1 4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810 Sad1 and UNC84 domain containing 1 protein-coding common_peak1_122_904_0.0838037992481429_9.86367588159464_0.653668672355741 chr3 119782296 119783584 + 0.653668672355741 NA intron (NM_001310711, intron 1 of 13) CpG 448 NM_001310711 56195 Mm.29966 NM_019550 ENSMUSG00000028134 Ptbp2 Ptb2|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding common_peak1_199_1817_-0.0622843584986548_10.7969943049448_0.653570147030456 chr8 13593695 13596226 + 0.653570147030456 NA intron (NM_009025, intron 7 of 23) intron (NM_009025, intron 7 of 23) -32499 NM_001080781 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak1_160_1269_0.0713841316994497_10.3463048475093_0.653524219274095 chr2 18671946 18673348 + 0.653524219274095 NA intron (NM_147778, intron 1 of 7) CpG 185 NM_147778 12238 Mm.249586 NM_147778 ENSMUSG00000051154 Commd3 AW550818|Bup|D2Ertd542e COMM domain containing 3 protein-coding common_peak1_17_109_-0.276674351651993_6.64302253769866_0.653284972411461-6 chr7 117486601 117487057 + 0.653284972411461 NA intron (NM_175645, intron 2 of 11) intron (NM_175645, intron 2 of 11) 105850 NM_175645 233781 Mm.461427 NM_175645 ENSMUSG00000030657 Xylt1 8030490L12 xylosyltransferase 1 protein-coding common_peak1_17_109_-0.276674351651993_6.64302253769866_0.653284972411461 chr13 95716677 95717171 + 0.653284972411461 NA intron (NM_027711, intron 11 of 35) B3A|SINE|B2 20004 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak1_17_109_-0.276674351651993_6.64302253769866_0.653284972411461-4 chr4 135351950 135352368 + 0.653284972411461 NA intron (NM_016799, intron 1 of 17) intron (NM_016799, intron 1 of 17) 1055 NM_016799 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak1_17_109_-0.276674351651993_6.64302253769866_0.653284972411461-5 chr7 19359431 19359886 + 0.653284972411461 NA promoter-TSS (NM_145822) promoter-TSS (NM_145822) -175 NM_145822 70333 Mm.171370 NM_145822 ENSMUSG00000047649 Cd3eap 1190028F09|2610103M17Rik|ASE-1|Ase1|CAST|PAF49 CD3E antigen, epsilon polypeptide associated protein protein-coding common_peak1_17_109_-0.276674351651993_6.64302253769866_0.653284972411461-2 chr2 11185071 11185505 + 0.653284972411461 NA intron (NM_008859, intron 1 of 17) Lx2B2|LINE|L1 12906 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding unique_peak2_17_109_-0.276674351651993_6.64302253769866_0.653284972411461 chr15 100658977 100660195 + 0.653284972411461 NA intron (NM_001270537, intron 2 of 10) RSINE1|SINE|B4 9914 NM_001270537 668218 Mm.451225 NM_001270537 ENSMUSG00000098112 Bin2 - bridging integrator 2 protein-coding common_peak1_17_109_-0.276674351651993_6.64302253769866_0.653284972411461-3 chr4 117134169 117134654 + 0.653284972411461 NA promoter-TSS (NM_001313916) promoter-TSS (NM_001313916) -448 NM_001313916 12795 Mm.259022 NM_013807 ENSMUSG00000028680 Plk3 Cnk|Fnk|PLK-3|PRK polo-like kinase 3 protein-coding common_peak1_74_565_-0.114508534542216_9.08740397556078_0.653183419611602-2 chr13 67060493 67061471 + 0.653183419611602 NA intron (NM_001166218, intron 1 of 3) intron (NM_001166218, intron 1 of 3) 188 NM_001166218 78251 Mm.297247 NM_001166218 ENSMUSG00000090641 Zfp712 4921504N20Rik|mszf31|mszf89 zinc finger protein 712 protein-coding common_peak1_74_565_-0.114508534542216_9.08740397556078_0.653183419611602 chr10 19172267 19173261 + 0.653183419611602 NA intron (NR_038022, intron 1 of 1) intron (NR_038022, intron 1 of 1) 5526 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_387_3813_0.0414738574233642_11.9178260570244_0.653057665161177 chr19 21270911 21275310 + 0.653057665161177 NA intron (NM_009551, intron 1 of 5) intron (NM_009551, intron 1 of 5) 832 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding common_peak2_82_549_0.106218060756326_9.15639683879018_0.653002250152496 chr8 109868020 109869455 + 0.653002250152496 NA intron (NM_001122594, intron 1 of 18) CpG 134 NM_001122594 244650 Mm.23494 NM_001122594 ENSMUSG00000031732 Phlpp2 AI481772|C130044A18Rik|Phlppl PH domain and leucine rich repeat protein phosphatase 2 protein-coding common_peak2_73_474_0.114612259179456_8.94908983280804_0.652781576188667 chr8 11558342 11559308 + 0.652781576188667 NA intron (NM_001302459, intron 1 of 1) intron (NM_001302459, intron 1 of 1) 415 NM_001302459 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding common_peak2_174_1548_-0.0675701273877145_10.5633363650957_0.652687761377209 chr3 142529365 142531434 + 0.652687761377209 NA promoter-TSS (NM_001083312) promoter-TSS (NM_001083312) 63 NM_145545 229900 Mm.45740 NM_145545 ENSMUSG00000040253 Gbp7 9830147J24Rik guanylate binding protein 7 protein-coding common_peak2_410_4097_0.0397678036768987_12.0205881708497_0.652657934821614 chr2 127502608 127509130 + 0.652657934821614 NA intron (NM_019789, intron 2 of 8) ID_B1|SINE|B4 15523 NM_001291005 56461 Mm.315292 NM_019789 ENSMUSG00000079056 Kcnip3 4933407H12Rik|AI413860|Csen|DREAM|KChIP3|R74849 Kv channel interacting protein 3, calsenilin protein-coding common_peak1_79_524_0.108185237450003_9.09026623127849_0.652536946158082 chr15 85656817 85657985 + 0.652536946158082 NA Intergenic Intergenic -46372 NR_110483 102800312 Mm.33117 NR_110483 Lncppara Lincppara|Mirlet7bhg|linc-Ppara long noncoding RNA near Ppara ncRNA common_peak2_137_1046_0.0771619045023417_10.070626679182_0.652487158497027 chr4 11720124 11722697 + 0.652487158497027 NA Intergenic Intergenic 16963 NM_010276 14579 Mm.247486 NM_010276 ENSMUSG00000028214 Gem AV020497 GTP binding protein (gene overexpressed in skeletal muscle) protein-coding common_peak2_35_239_-0.175592922549495_7.81909413433377_0.652238496659506 chr3 90475943 90476819 + 0.652238496659506 NA intron (NM_026374, intron 1 of 13) CpG 180 NM_026374 67781 Mm.227258 NM_026374 ENSMUSG00000001016 Ilf2 6230405A16Rik|TEG-267|Tex261|Tex267 interleukin enhancer binding factor 2 protein-coding common_peak1_158_1380_-0.0716213226616524_10.3956869429272_0.652176255668956 chrX 94212112 94213824 + 0.652176255668956 NA promoter-TSS (NM_012010) promoter-TSS (NM_012010) -317 NM_012010 26905 Mm.218851 NM_012010 ENSMUSG00000035150 Eif2s3x AA409828|AA547477|AI314668|Eif-2gx eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked protein-coding common_peak1_135_1145_-0.0790181342236647_10.1228822616451_0.651623903090818 chr18 70568204 70569524 + 0.651623903090818 NA exon (NM_001311071, exon 1 of 3) exon (NM_001311071, exon 1 of 3) 572 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak2_41_229_0.15859690404048_7.92478850296462_0.651519178861431-3 chr4 139310109 139311293 + 0.651519178861431 NA promoter-TSS (NM_025337) promoter-TSS (NM_025337) -1 NM_145384 212555 Mm.45131 NM_145384 ENSMUSG00000028744 Pqlc2 BC019216 PQ loop repeat containing 2 protein-coding common_peak2_41_229_0.15859690404048_7.92478850296462_0.651519178861431 chr11 32226402 32227125 + 0.651519178861431 NA intron (NM_010822, intron 1 of 3) CpG 258 NM_010822 268395 Mm.263161 NM_010822 ENSMUSG00000020287 Mpg 9830006D05|AI326268|APNG|Aag|Mid1 N-methylpurine-DNA glycosylase protein-coding common_peak1_41_229_0.15859690404048_7.92478850296462_0.651519178861431 chr14 68050915 68051669 + 0.651519178861431 NA Intergenic Intergenic -32592 NM_010910 18039 Mm.1956 NM_010910 ENSMUSG00000022055 Nefl AI847934|CMT2E|NF-L|NF68|Nfl neurofilament, light polypeptide protein-coding common_peak2_41_229_0.15859690404048_7.92478850296462_0.651519178861431-2 chr17 29166846 29168180 + 0.651519178861431 NA intron (NM_153166, intron 13 of 20) intron (NM_153166, intron 13 of 20) 32457 NM_001002786 442827 Mm.440341 NM_001002786 ENSMUSG00000064147 Rab44 9830134C10Rik RAB44, member RAS oncogene family protein-coding common_peak2_145_1123_0.0745050173510595_10.1716788288965_0.65131134001437 chr17 31221745 31225479 + 0.65131134001437 NA intron (NM_177823, intron 6 of 13) MLT1B|LTR|ERVL-MaLR 15546 NM_177823 328795 Mm.387930 NM_177823 ENSMUSG00000042345 Ubash3a 5830413C03Rik|C330001M22|Sts-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing, A protein-coding common_peak2_60_443_-0.129896415303133_8.72946765869854_0.651287646428453 chr9 57536783 57538349 + 0.651287646428453 NA promoter-TSS (NM_175273) promoter-TSS (NM_175273) 38 NM_001166364 78323 Mm.25814 NM_175273 ENSMUSG00000032305 Fam219b 2310046O06Rik|AI594866 family with sequence similarity 219, member B protein-coding unique_peak2_47_334_-0.147629506066684_8.31420253231179_0.650798373686721 chr11 83577980 83580147 + 0.650798373686721 NA promoter-TSS (NM_011338) promoter-TSS (NM_011338) -427 NM_011338 20308 Mm.416125 NM_011338 ENSMUSG00000019122 Ccl9 CCF18|MRP-2|Scya10|Scya9 chemokine (C-C motif) ligand 9 protein-coding common_peak1_51_302_0.138859572354336_8.31260376965012_0.650798373686721 chr15 82127712 82128398 + 0.650798373686721 NA intron (NM_172428, intron 1 of 6) CpG 133 NM_172428 76457 Mm.440373 NM_172428 ENSMUSG00000068114 Ccdc134 2310042L06Rik|AW208859 coiled-coil domain containing 134 protein-coding common_peak2_47_334_-0.147629506066684_8.31420253231179_0.650798373686721 chr17 23796930 23798371 + 0.650798373686721 NA Intergenic Intergenic -5537 NM_175229 75956 Mm.5222 NM_175229 ENSMUSG00000039218 Srrm2 5033413A03Rik|AA410130|SRm300|mKIAA0324 serine/arginine repetitive matrix 2 protein-coding common_peak2_32_167_0.185002524882119_7.48481868521982_0.650668730824613 chr13 3917566 3918445 + 0.650668730824613 NA exon (NM_019671, exon 1 of 12) exon (NM_019671, exon 1 of 12) 215 NM_019671 56349 Mm.22261 NM_019671 ENSMUSG00000021215 Net1 Net1a|mNET1 neuroepithelial cell transforming gene 1 protein-coding common_peak2_63_468_-0.123966227017496_8.81146099900663_0.650310912591876 chr9 50774174 50776059 + 0.650310912591876 NA promoter-TSS (NR_045601) promoter-TSS (NR_045601) -109 NM_133981 102580 Mm.160035 NM_133981 ENSMUSG00000032059 Alg9 8230402H15Rik|AI747665|B430313H07Rik|Dibd1 asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase) protein-coding common_peak1_223_2082_-0.058045440463653_10.9954244038088_0.649988240504602 chr5 31240210 31242173 + 0.649988240504602 NA intron (NM_147201, intron 1 of 17) CpG 273 NM_147201 192292 Mm.292040 NM_147201 ENSMUSG00000029148 Nrbp1 B230344L17Rik|Nrbp nuclear receptor binding protein 1 protein-coding common_peak2_100_803_-0.0942034975734707_9.60394994239219_0.649977017616789 chr16 46000614 46002799 + 0.649977017616789 NA intron (NM_001134480, intron 1 of 3) intron (NM_001134480, intron 1 of 3) 8707 NM_001134480 433022 Mm.380993 NM_001134480 ENSMUSG00000087141 Plcxd2 AW494639|EG433022 phosphatidylinositol-specific phospholipase C, X domain containing 2 protein-coding common_peak1_123_914_0.0822788939356141_9.87876738013921_0.649922102473598 chr10 81377588 81379347 + 0.649922102473598 NA promoter-TSS (NM_019757) promoter-TSS (NM_019757) -97 NM_019757 56371 Mm.24202 NM_019757 ENSMUSG00000020235 Fzr1 AW108046|Cdh1|FZR|FZR2|Fyr|HCDH|HCDH1 fizzy/cell division cycle 20 related 1 (Drosophila) protein-coding common_peak1_19_122_-0.251380277708463_6.81682436648501_0.64984593195523-4 chr6 120866133 120866721 + 0.64984593195523 NA intron (NM_153516, intron 4 of 6) intron (NM_153516, intron 4 of 6) 30197 NM_153516 94044 Mm.27990 NM_153516 ENSMUSG00000009112 Bcl2l13 BCL-RAMBO|E430016C20Rik|Mil-1|Mil1 BCL2-like 13 (apoptosis facilitator) protein-coding common_peak1_19_122_-0.251380277708463_6.81682436648501_0.64984593195523-3 chr5 111881196 111881601 + 0.64984593195523 NA Intergenic Intergenic -119670 NR_045833 269683 Mm.136946 NM_207252 ENSMUSG00000085271 E130006D01Rik Gm16018|Gm681|OTTMUSG00000029083 RIKEN cDNA E130006D01 gene ncRNA common_peak1_19_122_-0.251380277708463_6.81682436648501_0.64984593195523-2 chr15 97420640 97421170 + 0.64984593195523 NA Intergenic MT2B1|LTR|ERVL -173618 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_19_122_-0.251380277708463_6.81682436648501_0.64984593195523 chr10 18009282 18009794 + 0.64984593195523 NA Intergenic Intergenic 13714 NM_028440 73112 Mm.276041 NM_028440 ENSMUSG00000078453 Abracl 1700028I04Rik|3110003A17Rik ABRA C-terminal like protein-coding common_peak1_20_92_0.238315832690467_6.65831672745326_0.649787974765979 chr10 44846076 44846528 + 0.649787974765979 NA Intergenic Intergenic -220912 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding unique_peak2_20_92_0.238315832690467_6.65831672745326_0.649787974765979-2 chr8 126827738 126828728 + 0.649787974765979 NA Intergenic Intergenic 117688 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak1_20_92_0.238315832690467_6.65831672745326_0.649787974765979-4 chr9 124056630 124057066 + 0.649787974765979 NA Intergenic Intergenic 34877 NM_009914 12771 Mm.57050 NM_009914 ENSMUSG00000035448 Ccr3 CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3 chemokine (C-C motif) receptor 3 protein-coding common_peak2_20_92_0.238315832690467_6.65831672745326_0.649787974765979 chr1 152018618 152019239 + 0.649787974765979 NA intron (NM_197990, intron 1 of 5) intron (NM_197990, intron 1 of 5) 71392 NM_197990 69399 Mm.278031 NM_197990 ENSMUSG00000032666 1700025G04Rik 2610510E02Rik|2900042O04Rik|ENSMUSG00000073540 RIKEN cDNA 1700025G04 gene protein-coding common_peak2_20_92_0.238315832690467_6.65831672745326_0.649787974765979-2 chr10 37263650 37263967 + 0.649787974765979 NA Intergenic (CATTC)n|Simple_repeat|Simple_repeat -124882 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding unique_peak2_20_92_0.238315832690467_6.65831672745326_0.649787974765979 chr13 91610330 91610928 + 0.649787974765979 NA intron (NM_024186, intron 4 of 15) intron (NM_024186, intron 4 of 15) -130892 NM_028790 74156 Mm.275963 NM_028790 ENSMUSG00000021620 Acot12 1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1 acyl-CoA thioesterase 12 protein-coding common_peak1_20_92_0.238315832690467_6.65831672745326_0.649787974765979-2 chr3 139073727 139074233 + 0.649787974765979 NA intron (NM_145544, intron 1 of 13) intron (NM_145544, intron 1 of 13) 1221 NM_145544 229877 Mm.28893 NM_145544 ENSMUSG00000028149 Rap1gds1 BC011279|GDS1 RAP1, GTP-GDP dissociation stimulator 1 protein-coding common_peak1_20_92_0.238315832690467_6.65831672745326_0.649787974765979-3 chr6 54162427 54162841 + 0.649787974765979 NA intron (NM_001163640, intron 1 of 12) intron (NM_001163640, intron 1 of 12) -102224 NM_001311133 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak1_237_2239_-0.0555983355189689_11.1014838491855_0.649751950885089 chr8 105700154 105701577 + 0.649751950885089 NA promoter-TSS (NM_001047435) promoter-TSS (NM_001047435) 230 NM_001012638 497652 Mm.12964 NM_001012638 ENSMUSG00000038000 Acd - adrenocortical dysplasia protein-coding common_peak2_87_682_-0.102719403223427_9.36438206667838_0.649722628869278 chr15 36715129 36717049 + 0.649722628869278 NA Intergenic Intergenic 74843 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak1_163_1432_-0.0701550068240078_10.4497453908501_0.649570291626578 chr8 34154568 34155428 + 0.649570291626578 NA intron (NM_026432, intron 1 of 5) intron (NM_026432, intron 1 of 5) 435 NM_026432 67887 Mm.290353 NM_026432 ENSMUSG00000031532 Saraf 1810045K07Rik|Tmem66 store-operated calcium entry-associated regulatory factor protein-coding common_peak2_174_1410_0.0670490288045897_10.4960267869996_0.648738319971106 chr2 26387149 26390292 + 0.648738319971106 NA promoter-TSS (NM_173180) promoter-TSS (NM_173180) 596 NM_001085407 68112 Mm.253771 NM_026563 ENSMUSG00000026927 Sdccag3 C330016H24Rik|C630038K21Rik serologically defined colon cancer antigen 3 protein-coding common_peak2_69_520_-0.117081536568618_8.9665987939942_0.648558290022903 chr3 115711994 115715462 + 0.648558290022903 NA intron (NM_007901, intron 1 of 1) intron (NM_007901, intron 1 of 1) 1327 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding common_peak2_81_627_-0.106565172639845_9.2413381625717_0.648542191540794 chr1 52113046 52113878 + 0.648542191540794 NA Intergenic Intergenic -5976 NM_009283 20846 Mm.277406 NM_009283 ENSMUSG00000026104 Stat1 2010005J02Rik|AA408197 signal transducer and activator of transcription 1 protein-coding common_peak1_136_1155_-0.078588125965819_10.1356316195178_0.648506770453714 chr7 44891964 44892968 + 0.648506770453714 NA promoter-TSS (NM_029365) promoter-TSS (NM_029365) -100 NM_029365 75613 Mm.157778 NM_029365 ENSMUSG00000002968 Med25 2610034E13Rik|2610529E18Rik|ESTM2 mediator complex subunit 25 protein-coding common_peak1_414_4147_0.0394112772334427_12.0379058174299_0.648476598606552 chr15 96640679 96643463 + 0.648476598606552 NA promoter-TSS (NM_134086) promoter-TSS (NM_134086) -109 NM_134086 105727 Mm.103568 NM_134086 ENSMUSG00000023169 Slc38a1 AA408026|AA409865|AL022800|AU015942|NAT2 solute carrier family 38, member 1 protein-coding common_peak1_54_324_0.136995110470099_8.41279346315087_0.648410289223772-3 chr2 130906462 130907155 + 0.648410289223772 NA promoter-TSS (NR_015523) promoter-TSS (NR_015523) 312 NM_009730 11990 Mm.119936 NM_009730 ENSMUSG00000027312 Atrn AW558010|Mgca|mg attractin protein-coding common_peak1_54_324_0.136995110470099_8.41279346315087_0.648410289223772 chr12 11210083 11210879 + 0.648410289223772 NA Intergenic Intergenic -1533 NM_019544 56184 Mm.117113 NM_019544 ENSMUSG00000047002 Msgn1 Msgn|pMsgn1 mesogenin 1 protein-coding common_peak1_54_324_0.136995110470099_8.41279346315087_0.648410289223772-2 chr2 39189848 39190762 + 0.648410289223772 NA intron (NM_178778, intron 1 of 17) CpG 425 NM_178778 320271 Mm.204836 NM_178778 ENSMUSG00000035236 Scai 9330112M16|A930041I02Rik|AI662729 suppressor of cancer cell invasion protein-coding common_peak1_30_154_0.190557799460069_7.37140330500427_0.648351775534021 chr12 26469311 26469965 + 0.648351775534021 NA exon (NM_020557, exon 1 of 5) exon (NM_020557, exon 1 of 5) 423 NM_020557 22169 Mm.271839 NM_020557 ENSMUSG00000020638 Cmpk2 1200004E04Rik|TDKI|Tyki cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial protein-coding common_peak2_170_1370_0.0676203799242323_10.4548230457413_0.648328372747819 chr2 30250515 30254516 + 0.648328372747819 NA intron (NM_177725, intron 2 of 3) intron (NM_177725, intron 2 of 3) -13688 NM_001252568 227696 Mm.297949 NM_172267 ENSMUSG00000079484 Phyhd1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding common_peak2_206_1893_-0.0604907790683065_10.8569752259342_0.648174371102154 chr11 6519029 6522919 + 0.648174371102154 NA promoter-TSS (NM_178440) promoter-TSS (NM_178440) -16 NM_178440 246177 Mm.239554 NM_178440 ENSMUSG00000020437 Myo1g E430002D17Rik myosin IG protein-coding common_peak1_125_1045_-0.0824456651088035_9.98944430369254_0.648105179173583 chr3 52881011 52883083 + 0.648105179173583 NA Intergenic Intergenic 45619 NR_040555 622124 Mm.389434 NR_040555 ENSMUSG00000104401 Gm20750 - predicted gene, 20750 ncRNA common_peak1_65_410_0.120937675165553_8.74346342126446_0.648015986582241 chr13 37637885 37639214 + 0.648015986582241 NA Intergenic Intergenic -187489 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_140_1195_-0.0767360706188018_10.1856336388887_0.648001781882021 chr11 115419290 115420964 + 0.648001781882021 NA promoter-TSS (NM_027862) promoter-TSS (NM_027862) 1 NM_183285 70382 Mm.276299 NM_183285 ENSMUSG00000016940 Kctd2 2310012I15Rik potassium channel tetramerisation domain containing 2 protein-coding common_peak2_193_1751_-0.0628363850514084_10.7433688670755_0.647935089334125 chr1 151682169 151686788 + 0.647935089334125 NA intron (NM_022018, intron 5 of 13) intron (NM_022018, intron 5 of 13) -70896 NM_001311165 66967 Mm.337691 NM_001039644 ENSMUSG00000043019 Edem3 2310050N11Rik ER degradation enhancer, mannosidase alpha-like 3 protein-coding common_peak1_120_886_0.0837765503343846_9.83467856946826_0.647850193678191 chr10 67096070 67097523 + 0.647850193678191 NA exon (NM_001204915, exon 1 of 9) exon (NM_001204915, exon 1 of 9) 192 NM_001204915 28193 Mm.41272 NM_178606 ENSMUSG00000019873 Reep3 D10Ucla1 receptor accessory protein 3 protein-coding unique_peak2_40_278_-0.162678046763761_8.04278228844731_0.647734185633393 chr15 36614470 36615939 + 0.647734185633393 NA Intergenic Intergenic -6231 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak2_40_278_-0.162678046763761_8.04278228844731_0.647734185633393 chr7 49601013 49602645 + 0.647734185633393 NA intron (NM_001111016, intron 37 of 38) intron (NM_001111016, intron 37 of 38) 35006 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak2_40_278_-0.162678046763761_8.04278228844731_0.647734185633393-2 chrX 38455681 38456694 + 0.647734185633393 NA intron (NM_001290485, intron 1 of 8) intron (NM_001290485, intron 1 of 8) 273 NM_010685 16784 Mm.486 NM_010685 ENSMUSG00000016534 Lamp2 CD107b|LGP-B|Lamp II|Lamp-2|Lamp-2a|Lamp-2b|Lamp-2c|Mac3 lysosomal-associated membrane protein 2 protein-coding common_peak2_39_215_0.162859036653664_7.8363170204903_0.647622031301178 chr2 120352536 120353658 + 0.647622031301178 NA promoter-TSS (NM_178851) promoter-TSS (NM_178851) 36 NM_178851 269338 Mm.246131 NM_147153 ENSMUSG00000027291 Vps39 A230065P22Rik|AW743070|Vam6|Vam6P|mVam6 VPS39 HOPS complex subunit protein-coding common_peak2_104_841_-0.092096192389576_9.67162832687161_0.647377052420155 chr1 38986785 38988791 + 0.647377052420155 NA promoter-TSS (NM_026850) promoter-TSS (NM_026850) -26 NM_026850 68833 Mm.28121 NM_026850 ENSMUSG00000026078 Pdcl3 1110061A19Rik|C80025|Viaf1 phosducin-like 3 protein-coding common_peak1_68_434_0.117723729510704_8.82373345549144_0.64722493575722 chr2 26315508 26316482 + 0.64722493575722 NA intron (NM_153410, intron 1 of 13) intron (NM_153410, intron 1 of 13) 462 NM_153410 67839 Mm.266611 NM_153410 ENSMUSG00000026930 Gpsm1 1810037C22Rik|AW107933|Ags3 G-protein signalling modulator 1 (AGS3-like, C. elegans) protein-coding common_peak2_26_128_0.210980311416341_7.11671741113142_0.647072872090464-2 chr4 15994580 15995561 + 0.647072872090464 NA Intergenic Intergenic 18807 NM_145950 209212 Mm.46455 NM_145950 ENSMUSG00000041153 Osgin2 BC010311|C230027H09Rik oxidative stress induced growth inhibitor family member 2 protein-coding common_peak1_26_128_0.210980311416341_7.11671741113142_0.647072872090464 chr11 57953537 57954127 + 0.647072872090464 NA Intergenic Intergenic -55232 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_26_128_0.210980311416341_7.11671741113142_0.647072872090464 chr15 85908567 85909278 + 0.647072872090464 NA intron (NM_009886, intron 24 of 34) intron (NM_009886, intron 24 of 34) 29595 NM_028063 72026 Mm.158211 NM_028063 ENSMUSG00000022386 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding unique_peak2_28_141_0.198916195007886_7.24920521700863_0.647053662706784 chr9 21273902 21275043 + 0.647053662706784 NA 3' UTR (NM_153583, exon 10 of 10) 3' UTR (NM_153583, exon 10 of 10) 9187 NM_153583 235040 Mm.440165 NM_153583 ENSMUSG00000002820 Atg4d 9830134P12Rik|APG4-D|Apg4d|Atg4dl|Autl4 autophagy related 4D, cysteine peptidase protein-coding common_peak1_28_141_0.198916195007886_7.24920521700863_0.647053662706784 chr7 141215775 141216426 + 0.647053662706784 NA intron (NM_025886, intron 1 of 5) CpG 240 NM_025886 66985 Mm.21202 NM_025886 ENSMUSG00000038618 Rassf7 2400009B11Rik|AW210608 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 protein-coding common_peak2_28_141_0.198916195007886_7.24920521700863_0.647053662706784-2 chr4 43970234 43971081 + 0.647053662706784 NA intron (NM_027450, intron 4 of 4) intron (NM_027450, intron 4 of 4) -12847 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding common_peak2_28_141_0.198916195007886_7.24920521700863_0.647053662706784 chr2 78990874 78991787 + 0.647053662706784 NA Intergenic Intergenic 122283 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_71_458_0.115559640831572_8.90013016382959_0.646970118526349 chr9 44319334 44320919 + 0.646970118526349 NA 5' UTR (NM_027909, exon 1 of 14) 5' UTR (NM_027909, exon 1 of 14) 156 NM_027909 71764 Mm.491174 NM_027909 ENSMUSG00000032120 C2cd2l 1300006O23Rik|Tmem24 C2 calcium-dependent domain containing 2-like protein-coding common_peak2_135_1027_0.0777486453393621_10.0444988718636_0.646946266564005 chr3 21952271 21954499 + 0.646946266564005 NA Intergenic Intergenic -123267 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_96_670_0.0951694071632261_9.4377536597818_0.646934896326758 chr10 80928686 80929800 + 0.646934896326758 NA promoter-TSS (NM_008655) promoter-TSS (NM_008655) -848 NM_008655 17873 Mm.1360 NM_008655 ENSMUSG00000015312 Gadd45b AI323528|Myd118 growth arrest and DNA-damage-inducible 45 beta protein-coding common_peak2_96_670_0.0951694071632261_9.4377536597818_0.646934896326758 chr19 21945602 21947294 + 0.646934896326758 NA Intergenic MLT1A1|LTR|ERVL-MaLR 168108 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding unique_peak2_22_104_0.224215286427388_6.82635316087982_0.646765422667863-2 chr10 59920364 59921368 + 0.646765422667863 NA Intergenic MIRb|SINE|MIR 30904 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak1_22_104_0.224215286427388_6.82635316087982_0.646765422667863 chr10 76441592 76442070 + 0.646765422667863 NA intron (NM_008787, intron 1 of 41) intron (NM_008787, intron 1 of 41) 1081 NM_008787 18541 Mm.251794 NM_008787 ENSMUSG00000001151 Pcnt AW476095|C86676|KEN|Pcnt2|kendrin|m239Asp|m275Asp pericentrin (kendrin) protein-coding unique_peak2_22_104_0.224215286427388_6.82635316087982_0.646765422667863 chr1 172203600 172204532 + 0.646765422667863 NA intron (NM_011063, intron 1 of 3) intron (NM_011063, intron 1 of 3) 2715 NM_011063 18611 Mm.544 NM_011063 ENSMUSG00000013698 Pea15a Mat1|PEA-15|Pea15|Pkcs15 phosphoprotein enriched in astrocytes 15A protein-coding common_peak1_22_104_0.224215286427388_6.82635316087982_0.646765422667863-2 chr2 32552757 32553287 + 0.646765422667863 NA intron (NM_153560, intron 1 of 10) intron (NM_153560, intron 1 of 10) 17663 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak1_22_104_0.224215286427388_6.82635316087982_0.646765422667863-3 chr4 133121916 133122431 + 0.646765422667863 NA Intergenic Intergenic -8460 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak2_22_104_0.224215286427388_6.82635316087982_0.646765422667863 chr5 36988387 36989025 + 0.646765422667863 NA intron (NM_011716, intron 1 of 7) CpG 276 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin Wolfram syndrome 1 homolog (human) protein-coding common_peak1_31_209_-0.191379943354598_7.61855554598882_0.646599225030903-3 chr8 120531978 120532543 + 0.646599225030903 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) -3597 NM_001145897 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_31_209_-0.191379943354598_7.61855554598882_0.646599225030903-2 chr15 75118739 75119340 + 0.646599225030903 NA Intergenic Intergenic -7090 NM_001099217 100041546 Mm.482110 NM_001099217 ENSMUSG00000022584 Ly6c2 Ly-6C.2|Ly-6C2 lymphocyte antigen 6 complex, locus C2 protein-coding common_peak1_31_209_-0.191379943354598_7.61855554598882_0.646599225030903 chr13 38634601 38635317 + 0.646599225030903 NA exon (NM_139063, exon 1 of 5) exon (NM_139063, exon 1 of 5) 150 NM_139063 17828 Mm.261554 NM_139063 ENSMUSG00000038982 Bloc1s5 1810074A19Rik|Muted|mu biogenesis of lysosomal organelles complex-1, subunit 5, muted protein-coding common_peak2_44_250_0.15463508361386_8.0488610957577_0.646422076639835 chr12 84616889 84618149 + 0.646422076639835 NA promoter-TSS (NM_008992) promoter-TSS (NM_008992) -53 NM_008992 19300 Mm.229109 NM_008992 ENSMUSG00000021240 Abcd4 P69r|P70R|Pxmp1l ATP-binding cassette, sub-family D (ALD), member 4 protein-coding unique_peak2_45_318_-0.152339498485004_8.24124286452237_0.64610422533425 chr4 57299621 57301049 + 0.64610422533425 NA intron (NM_011207, intron 1 of 25) CpG 1502 NM_011207 545622 Mm.246552 NM_011207 ENSMUSG00000038764 Ptpn3 9530011I20Rik|PTP-H1|PTPCL protein tyrosine phosphatase, non-receptor type 3 protein-coding common_peak1_21_136_-0.238234340266575_6.97891491282724_0.646070914710201-2 chr13 27205973 27206236 + 0.646070914710201 NA Intergenic (AATAG)n|Simple_repeat|Simple_repeat 7201 NM_001163218 27372 Mm.291456 NM_013766 ENSMUSG00000017922 Prl3c1 Ghd7|PLP-J|Prlpi|Prlpj|decidualin prolactin family 3, subfamily c, member 1 protein-coding common_peak1_21_136_-0.238234340266575_6.97891491282724_0.646070914710201 chr12 102363111 102363592 + 0.646070914710201 NA intron (NM_001161365, intron 5 of 9) intron (NM_001161365, intron 5 of 9) 76346 NM_011175 19141 Mm.17185 NM_011175 ENSMUSG00000021190 Lgmn AEP|AI746452|AU022324|Prsc1 legumain protein-coding unique_peak2_21_136_-0.238234340266575_6.97891491282724_0.646070914710201-2 chr17 28079731 28080578 + 0.646070914710201 NA exon (NM_013687, exon 2 of 10) exon (NM_013687, exon 2 of 10) 430 NM_013687 21463 Mm.29758 NM_013687 ENSMUSG00000062859 Tcp11 D17Ken1|Tcp-11 t-complex protein 11 protein-coding common_peak1_21_136_-0.238234340266575_6.97891491282724_0.646070914710201-3 chr15 60823631 60824137 + 0.646070914710201 NA exon (NM_001162926, exon 2 of 2) exon (NM_001162926, exon 2 of 2) 919 NR_030696 320469 Mm.230853 NM_177166 9930014A18Rik - RIKEN cDNA 9930014A18 gene ncRNA unique_peak2_21_136_-0.238234340266575_6.97891491282724_0.646070914710201 chr17 24632236 24633236 + 0.646070914710201 NA promoter-TSS (NM_011647) promoter-TSS (NM_011647) 54 NM_008743 18207 Mm.148315 NM_008743 ENSMUSG00000041429 Nthl1 Nth1|Octs3 nth (endonuclease III)-like 1 (E.coli) protein-coding common_peak1_24_116_0.215650472552979_6.97818995585989_0.646070914710201 chr2 157447768 157448281 + 0.646070914710201 NA intron (NM_001025395, intron 2 of 13) B3A|SINE|B2 23731 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak1_21_136_-0.238234340266575_6.97891491282724_0.646070914710201-4 chr2 30591094 30591581 + 0.646070914710201 NA Intergenic MTE2a|LTR|ERVL-MaLR -3707 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding common_peak1_24_116_0.215650472552979_6.97818995585989_0.646070914710201-2 chr3 84820819 84821313 + 0.646070914710201 NA intron (NM_001177773, intron 1 of 13) ORR1D1|LTR|ERVL-MaLR 5489 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak2_58_426_-0.132565854578665_8.67180933233116_0.646022872414972 chr17 33089044 33089975 + 0.646022872414972 NA intron (NM_001024950, intron 1 of 3) intron (NM_001024950, intron 1 of 3) 142 NM_001024950 240068 Mm.121392 NM_001024950 ENSMUSG00000067424 Zfp563 D10628|D130054H01|NTfin7|Zfp413 zinc finger protein 563 protein-coding common_peak2_101_812_-0.0928284537612143_9.62069731519442_0.645985167106456 chr9 65908235 65910182 + 0.645985167106456 NA promoter-TSS (NM_019797) promoter-TSS (NM_019797) 198 NM_173185 214897 Mm.325816 NM_173185 ENSMUSG00000032384 Csnk1g1 9130020E21Rik casein kinase 1, gamma 1 protein-coding common_peak2_143_1104_0.0746916411529419_10.1471764748553_0.645748372056559 chr16 38562099 38563736 + 0.645748372056559 NA 5' UTR (NM_001205287, exon 1 of 9) 5' UTR (NM_001205287, exon 1 of 9) 103 NM_026407 67846 Mm.310476 NM_026407 ENSMUSG00000002845 Tmem39a 2610033C09Rik transmembrane protein 39a protein-coding common_peak1_151_1182_0.0719667786161686_10.2442177476479_0.645137531198379-2 chr11 95712284 95714080 + 0.645137531198379 NA promoter-TSS (NR_045780) promoter-TSS (NR_045780) -428 NR_045780 432396 Mm.426849 NR_045780 ENSMUSG00000086191 Zfp652os 1110035M17Rik zinc finger protein 652, opposite strand ncRNA common_peak1_151_1182_0.0719667786161686_10.2442177476479_0.645137531198379 chr1 121327175 121328770 + 0.645137531198379 NA promoter-TSS (NM_133748) promoter-TSS (NM_133748) 52 NM_001271532 72999 Mm.27136 NM_133748 ENSMUSG00000003721 Insig2 2900053I11Rik|C730043J18Rik|Insig-2 insulin induced gene 2 protein-coding common_peak2_173_1537_-0.067429646109618_10.553124964907_0.64509950658395 chr4 126296257 126302213 + 0.64509950658395 NA intron (NM_199473, intron 2 of 3) ID_B1|SINE|B4 12441 NM_199473 329941 Mm.296327 NM_199473 ENSMUSG00000056174 Col8a2 AI429819 collagen, type VIII, alpha 2 protein-coding common_peak1_29_194_-0.198673881151907_7.50799337317366_0.644897009867296-3 chr7 66251465 66252205 + 0.644897009867296 NA Intergenic RLTR14_RN|LTR|ERV1 129889 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_29_194_-0.198673881151907_7.50799337317366_0.644897009867296-2 chr4 133677667 133678238 + 0.644897009867296 NA Intergenic Intergenic -5305 NM_001145956 230801 Mm.217004 NM_178698 ENSMUSG00000043257 Pigv B330013B03|D430024F16Rik phosphatidylinositol glycan anchor biosynthesis, class V protein-coding common_peak1_29_194_-0.198673881151907_7.50799337317366_0.644897009867296 chr10 58255384 58256022 + 0.644897009867296 NA intron (NM_027375, intron 1 of 22) CpG 177 NM_027375 70297 Mm.25531 NM_027375 ENSMUSG00000038039 Gcc2 0610043A03Rik|2210420P05Rik|2600014C01Rik|AW112121|mKIAA0336 GRIP and coiled-coil domain containing 2 protein-coding unique_peak2_14_89_-0.309808974918327_6.33694860887051_0.64473631751325 chr15 74962031 74962789 + 0.64473631751325 NA Intergenic MTC|LTR|ERVL-MaLR 7304 NM_001164040 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak1_14_89_-0.309808974918327_6.33694860887051_0.64473631751325-4 chr19 29804926 29805331 + 0.64473631751325 NA intron (NM_172836, intron 1 of 7) CpG 881 NM_172836 240613 Mm.313351 NM_172836 ENSMUSG00000046138 9930021J03Rik ENSMUSG00000048936|Gm9832|mKIAA2026 RIKEN cDNA 9930021J03 gene protein-coding unique_peak2_14_89_-0.309808974918327_6.33694860887051_0.64473631751325-3 chr18 55548914 55549461 + 0.64473631751325 NA Intergenic Intergenic -559007 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding common_peak1_14_89_-0.309808974918327_6.33694860887051_0.64473631751325-2 chr17 56291307 56291656 + 0.64473631751325 NA promoter-TSS (NM_025836) promoter-TSS (NM_025836) -970 NM_025836 66905 Mm.311696 NM_025836 ENSMUSG00000024197 Plin3 1300012C15Rik|M6prbp1|Tip47 perilipin 3 protein-coding unique_peak2_14_89_-0.309808974918327_6.33694860887051_0.64473631751325-5 chr4 131843071 131844039 + 0.64473631751325 NA promoter-TSS (NM_025297) promoter-TSS (NM_025297) 84 NM_025297 26922 Mm.192706 NM_025297 ENSMUSG00000028910 Mecr AI195831|Nrbf1 mitochondrial trans-2-enoyl-CoA reductase protein-coding common_peak1_14_89_-0.309808974918327_6.33694860887051_0.64473631751325-3 chr19 4135703 4136096 + 0.64473631751325 NA 3' UTR (NM_144532, exon 6 of 6) 3' UTR (NM_144532, exon 6 of 6) 3710 NM_144532 73660 Mm.379226 NM_144532 ENSMUSG00000024842 Cabp4 2410038D05Rik calcium binding protein 4 protein-coding common_peak2_14_89_-0.309808974918327_6.33694860887051_0.64473631751325 chr3 69463829 69464553 + 0.64473631751325 NA intron (NM_178726, intron 1 of 3) intron (NM_178726, intron 1 of 3) 134769 NM_020026 26879 Mm.153710 NM_020026 ENSMUSG00000043300 B3galnt1 B3galt3|b3GT3 UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1 protein-coding unique_peak2_14_89_-0.309808974918327_6.33694860887051_0.64473631751325-4 chr19 17382656 17383558 + 0.64473631751325 NA Intergenic Intergenic -10263 NM_010265 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_14_89_-0.309808974918327_6.33694860887051_0.64473631751325 chr13 23423996 23424317 + 0.64473631751325 NA promoter-TSS (NM_013924) promoter-TSS (NM_013924) -290 NM_013924 30946 Mm.292094 NM_013924 ENSMUSG00000036376 Abt1 - activator of basal transcription 1 protein-coding unique_peak2_14_89_-0.309808974918327_6.33694860887051_0.64473631751325-6 chr8 13251151 13251926 + 0.64473631751325 NA intron (NM_172750, intron 1 of 6) intron (NM_172750, intron 1 of 6) 2624 NM_172750 234072 Mm.132785 NM_172750 ENSMUSG00000031448 Adprhl1 Arh2|D330008N11Rik ADP-ribosylhydrolase like 1 protein-coding unique_peak2_14_89_-0.309808974918327_6.33694860887051_0.64473631751325-2 chr16 96373865 96374536 + 0.64473631751325 NA intron (NM_028078, intron 3 of 7) intron (NM_028078, intron 3 of 7) 12436 NM_028078 72058 Mm.119714 NM_028078 ENSMUSG00000000159 Igsf5 2010003D20Rik|JCAM|Jam4 immunoglobulin superfamily, member 5 protein-coding common_peak1_23_150_-0.224629271232984_7.12609010370859_0.644587559536362-3 chr9 27191582 27192155 + 0.644587559536362 NA Intergenic Intergenic -36447 NM_023277 83964 Mm.28770 NM_023277 ENSMUSG00000031990 Jam3 1110002N23Rik|JAM-3|JAM-C|Jcam3 junction adhesion molecule 3 protein-coding common_peak1_23_150_-0.224629271232984_7.12609010370859_0.644587559536362 chr14 36968829 36969434 + 0.644587559536362 NA promoter-TSS (NM_027045) promoter-TSS (NM_027045) -367 NM_027045 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding common_peak1_23_150_-0.224629271232984_7.12609010370859_0.644587559536362-2 chr18 74267611 74268168 + 0.644587559536362 NA promoter-TSS (NM_013594) promoter-TSS (NM_013594) -399 NM_013594 17190 Mm.22522 NM_013594 ENSMUSG00000024561 Mbd1 Cxxc3|PCM1 methyl-CpG binding domain protein 1 protein-coding common_peak2_38_262_-0.165975539684442_7.95593121945008_0.644445265607366 chr17 56133129 56134838 + 0.644445265607366 NA promoter-TSS (NM_013662) promoter-TSS (NM_013662) -131 NM_013662 20359 Mm.8029 NM_013662 ENSMUSG00000001227 Sema6b Sema|Seman|VIb|semaZ sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B protein-coding common_peak1_38_262_-0.165975539684442_7.95593121945008_0.644445265607366-2 chr19 38223764 38224756 + 0.644445265607366 NA promoter-TSS (NM_001081075) promoter-TSS (NM_001081075) -128 NM_001081075 70567 Mm.30607 NM_001081075 ENSMUSG00000054237 Fra10ac1 5730455O13Rik|AI448293 FRA10AC1 homolog (human) protein-coding common_peak1_38_262_-0.165975539684442_7.95593121945008_0.644445265607366 chr18 90579484 90580162 + 0.644445265607366 NA Intergenic Intergenic 69669 NM_198295 67988 Mm.268041 NM_198295 ENSMUSG00000024614 Tmx3 6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830 thioredoxin-related transmembrane protein 3 protein-coding common_peak1_226_2115_-0.0571791651262945_11.0185343295509_0.644436494408029 chr4 144891918 144895116 + 0.644436494408029 NA exon (NM_011303, exon 1 of 6) exon (NM_011303, exon 1 of 6) 380 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_132_999_0.0781160280002737_10.0048422986622_0.644388573931768 chr10 96371249 96372102 + 0.644388573931768 NA Intergenic Intergenic 145468 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_132_999_0.0781160280002737_10.0048422986622_0.644388573931768-2 chr15 57772287 57773800 + 0.644388573931768 NA intron (NM_199449, intron 2 of 3) Tigger9b|DNA|TcMar-Tigger 78376 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding common_peak2_132_999_0.0781160280002737_10.0048422986622_0.644388573931768 chr2 180256334 180258444 + 0.644388573931768 NA promoter-TSS (NM_025587) promoter-TSS (NM_025587) 10 NM_025587 66481 Mm.289669 NM_025587 ENSMUSG00000039001 Rps21 1810049N11Rik|2410030A14Rik ribosomal protein S21 protein-coding common_peak2_37_201_0.168765031831452_7.74259399866752_0.644212126567429 chr10 39375843 39377727 + 0.644212126567429 NA intron (NM_008054, intron 1 of 13) MIR|SINE|MIR 6986 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_37_201_0.168765031831452_7.74259399866752_0.644212126567429-2 chr9 116122320 116123779 + 0.644212126567429 NA intron (NM_009371, intron 4 of 7) intron (NM_009371, intron 4 of 7) 52314 NM_029575 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_37_201_0.168765031831452_7.74259399866752_0.644212126567429 chr11 87701891 87702627 + 0.644212126567429 NA intron (NR_045139, intron 1 of 1) intron (NR_045139, intron 1 of 1) 2735 NR_045139 68690 Mm.342009 NR_045139 1110028F11Rik - RIKEN cDNA 1110028F11 gene ncRNA common_peak2_27_179_-0.205288346311749_7.3892089231738_0.644198074451427 chr4 11899444 11900518 + 0.644198074451427 NA Intergenic Intergenic 65732 NM_001098231 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding common_peak1_27_179_-0.205288346311749_7.3892089231738_0.644198074451427 chr13 51798146 51798630 + 0.644198074451427 NA Intergenic Intergenic -4641 NM_013660 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_136_1037_0.0767468281769776_10.0579641424464_0.643700468710014 chr1 52576961 52580277 + 0.643700468710014 NA Intergenic Intergenic -52086 NR_024590 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding common_peak1_15_64_0.273885450096714_6.15931053807681_0.643324565023122-4 chr14 121710828 121711286 + 0.643324565023122 NA intron (NM_134074, intron 1 of 52) MTD|LTR|ERVL-MaLR -12640 NM_001081039 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding unique_peak2_15_64_0.273885450096714_6.15931053807681_0.643324565023122 chr5 146777041 146777738 + 0.643324565023122 NA intron (NM_011669, intron 1 of 8) intron (NM_011669, intron 1 of 8) 17567 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak1_15_64_0.273885450096714_6.15931053807681_0.643324565023122-6 chr5 73252710 73253141 + 0.643324565023122 NA intron (NM_028194, intron 1 of 62) intron (NM_028194, intron 1 of 62) 3693 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_15_64_0.273885450096714_6.15931053807681_0.643324565023122 chr1 152904803 152905138 + 0.643324565023122 NA Intergenic Intergenic -2324 NM_001005507 226517 Mm.270775 NM_001005507 ENSMUSG00000042772 Smg7 9430023P16Rik|mKIAA0250 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_15_64_0.273885450096714_6.15931053807681_0.643324565023122-3 chr10 63176472 63176909 + 0.643324565023122 NA intron (NM_182992, intron 2 of 19) intron (NM_182992, intron 2 of 19) 27262 NM_182992 68802 Mm.259767 NM_182992 ENSMUSG00000020067 Mypn 1110056A04Rik|9830112J03|AI853556|mKIAA4170 myopalladin protein-coding common_peak1_15_64_0.273885450096714_6.15931053807681_0.643324565023122-5 chr2 146424028 146424545 + 0.643324565023122 NA intron (NM_001033348, intron 15 of 40) intron (NM_001033348, intron 15 of 40) 87718 NM_001033348 241694 Mm.222310 NM_001033348 ENSMUSG00000037110 Ralgapa2 A230067G21Rik|AS250|BC053994|RGC2|pp250 Ral GTPase activating protein, alpha subunit 2 (catalytic) protein-coding common_peak1_15_64_0.273885450096714_6.15931053807681_0.643324565023122-2 chr10 51490495 51490935 + 0.643324565023122 NA promoter-TSS (NM_013532) promoter-TSS (NM_013532) -183 NM_001291894 14728 Mm.34408 NM_013532 ENSMUSG00000062593 Lilrb4a CD85K|Gp49b|HM18|ILT3|LIR-5|Lilrb4|gp49 leukocyte immunoglobulin-like receptor, subfamily B, member 4A protein-coding common_peak1_52_309_0.139617360168874_8.34593308535868_0.64325873811137 chr9 120339681 120340290 + 0.64325873811137 NA intron (NM_144557, intron 2 of 16) B4|SINE|B4 35912 NM_144557 245049 Mm.100936 NM_144557 ENSMUSG00000041794 Myrip A230081N12Rik|Slac2-c|Slac2c myosin VIIA and Rab interacting protein protein-coding common_peak2_52_309_0.139617360168874_8.34593308535868_0.64325873811137 chr13 43222650 43224268 + 0.64325873811137 NA intron (NM_001033399, intron 1 of 1) B4A|SINE|B4 -51958 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak2_125_933_0.0809427314284772_9.9077501054239_0.643018634919243 chr2 128817028 128819190 + 0.643018634919243 NA promoter-TSS (NM_028248) promoter-TSS (NM_028248) -194 NM_028248 72477 Mm.259688 NM_028248 ENSMUSG00000014353 Tmem87b 2610301K12Rik|2810431I02Rik|AU014804 transmembrane protein 87B protein-coding common_peak1_95_756_-0.0971493995209247_9.51557479022527_0.642831169447044 chr1 181256066 181257575 + 0.642831169447044 NA Intergenic Intergenic -44842 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak1_63_394_0.123769042433414_8.68759336428117_0.642671282859021 chr14 56303426 56304459 + 0.642671282859021 NA Intergenic Intergenic -41682 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak1_73_555_-0.11254511032574_9.06266851756064_0.642577288933102 chr2 166793157 166794383 + 0.642577288933102 NA promoter-TSS (NM_023815) promoter-TSS (NM_023815) 3 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding common_peak1_25_165_-0.219618186705993_7.26523033799393_0.642552130831733 chr10 94846789 94847379 + 0.642552130831733 NA intron (NM_018797, intron 12 of 30) intron (NM_018797, intron 12 of 30) 97494 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding unique_peak2_25_165_-0.219618186705993_7.26523033799393_0.642552130831733 chr5 72162360 72163672 + 0.642552130831733 NA intron (NM_178599, intron 2 of 4) intron (NM_178599, intron 2 of 4) 5167 NM_178599 27784 Mm.44223 NM_178599 ENSMUSG00000029213 Commd8 C77770|D5Buc26e COMM domain containing 8 protein-coding common_peak2_25_165_-0.219618186705993_7.26523033799393_0.642552130831733 chr2 155592167 155593272 + 0.642552130831733 NA promoter-TSS (NM_008180) promoter-TSS (NM_008180) 91 NM_001291111 14854 Mm.252316 NM_008180 ENSMUSG00000027610 Gss AI314904|GS-A/GS-B|GSH-S glutathione synthetase protein-coding common_peak2_76_582_-0.110630532427431_9.13203680698678_0.642507036889285 chr9 54733312 54735191 + 0.642507036889285 NA intron (NM_001025376, intron 1 of 10) intron (NM_001025376, intron 1 of 10) 298 NM_023191 66317 Mm.28437 NM_023191 ENSMUSG00000061559 Wdr61 2700038L12Rik|2810418I05Rik|REC14 WD repeat domain 61 protein-coding common_peak1_48_342_-0.145188529262128_8.34947050154175_0.642208111190512 chr6 135011534 135012277 + 0.642208111190512 NA intron (NM_026360, intron 1 of 11) intron (NM_026360, intron 1 of 11) 293 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding common_peak2_304_2827_0.047058633115892_11.4890957213673_0.641931552221372 chr2 156311057 156313613 + 0.641931552221372 NA promoter-TSS (NM_027585) promoter-TSS (NM_027585) -138 NM_027585 70873 Mm.475234 NM_027585 ENSMUSG00000038085 Cnbd2 4921517L17Rik|5430421B09Rik|Cris cyclic nucleotide binding domain containing 2 protein-coding common_peak2_42_236_0.156983921355692_7.9672352095761_0.641695054225758-2 chr10 17795442 17796898 + 0.641695054225758 NA promoter-TSS (NM_138628) promoter-TSS (NM_138628) -49 NM_138628 378431 Mm.283493 NM_138628 ENSMUSG00000039891 Txlnb 2310001N14Rik|Mdp77 taxilin beta protein-coding common_peak1_42_236_0.156983921355692_7.9672352095761_0.641695054225758 chr14 66220585 66221152 + 0.641695054225758 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -7316 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_42_236_0.156983921355692_7.9672352095761_0.641695054225758 chr1 11096620 11098204 + 0.641695054225758 NA intron (NM_029525, intron 6 of 39) intron (NM_029525, intron 6 of 39) 103947 NM_029525 109294 Mm.123247 NM_029525 ENSMUSG00000048960 Prex2 6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 protein-coding common_peak2_43_302_-0.156763929592644_8.16479201867663_0.641659940713927 chr10 7470208 7472170 + 0.641659940713927 NA intron (NM_029975, intron 1 of 5) L1_Mur3|LINE|L1 2288 NM_029975 77777 Mm.442442 NM_029975 ENSMUSG00000079685 Ulbp1 A430108B07Rik|MULT1 UL16 binding protein 1 protein-coding common_peak2_43_302_-0.156763929592644_8.16479201867663_0.641659940713927-2 chr10 99126653 99128260 + 0.641659940713927 NA intron (NM_027740, intron 3 of 11) intron (NM_027740, intron 3 of 11) 19321 NM_015737 14426 Mm.314 NM_015737 ENSMUSG00000090035 Galnt4 AV011803 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 protein-coding common_peak2_47_272_0.147630638358599_8.16657246009915_0.641659940713927 chr10 58381952 58383733 + 0.641659940713927 NA intron (NM_201242, intron 1 of 9) intron (NM_201242, intron 1 of 9) 11388 NM_201242 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak2_133_1008_0.0784455522297218_10.0179332352212_0.641406413022156 chr14 34097920 34100604 + 0.641406413022156 NA intron (NM_001281845, intron 11 of 11) intron (NM_001281845, intron 11 of 11) 3492 NM_001251843 105518 Mm.246608 NM_001251843 ENSMUSG00000095493 A630023A22Rik AI461879 RIKEN cDNA A630023A22 gene protein-coding common_peak1_35_187_0.176708821381386_7.64294326236833_0.641395825800568 chr11 76243008 76243732 + 0.641395825800568 NA promoter-TSS (NM_183263) promoter-TSS (NM_183263) 329 NM_026029 67201 Mm.482113 NM_026029 ENSMUSG00000017286 Glod4 1700082G03Rik|2700085E05Rik|C81254 glyoxalase domain containing 4 protein-coding common_peak1_35_187_0.176708821381386_7.64294326236833_0.641395825800568-2 chr5 114942229 114942756 + 0.641395825800568 NA intron (NM_028211, intron 1 of 5) intron (NM_028211, intron 1 of 5) 290 NM_028211 72357 Mm.292672 NM_028211 ENSMUSG00000029559 2210016L21Rik - RIKEN cDNA 2210016L21 gene protein-coding unique_peak2_35_187_0.176708821381386_7.64294326236833_0.641395825800568 chr18 80587086 80588534 + 0.641395825800568 NA Intergenic Intergenic -43264 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_205_1881_-0.0598907177654393_10.8481055538458_0.64132607464652 chr4 46599709 46602424 + 0.64132607464652 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) 863 NM_001164804 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak2_69_442_0.116895137154872_8.84961045713245_0.641213778988668 chr9 70257033 70258508 + 0.641213778988668 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 50420 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak2_75_491_0.111074320430363_8.99805166555442_0.641073384625144 chr11 4202333 4204321 + 0.641073384625144 NA intron (NM_134023, intron 1 of 8) intron (NM_134023, intron 1 of 8) -14924 NM_028022 71962 Mm.7852 NM_028022 ENSMUSG00000020424 Gatsl3 2410008K03Rik GATS protein-like 3 protein-coding common_peak2_210_1936_-0.0590088994642901_10.8901037888711_0.64030650240838 chr5 23891249 23895381 + 0.64030650240838 NA intron (NR_037304, intron 2 of 4) intron (NR_037304, intron 2 of 4) 41082 NR_028536 100217436 NR_028536 Snord93 Gm22397|MBII-336 small nucleolar RNA, C/D box 93 snoRNA common_peak1_99_793_-0.0937553826338622_9.58611750582603_0.640300573088616 chr1 105971270 105972662 + 0.640300573088616 NA Intergenic Intergenic -18440 NM_001122676 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding common_peak1_36_247_-0.174412659175465_7.86698998079914_0.64019198239148 chr5 64781011 64781677 + 0.64019198239148 NA Intergenic Intergenic -22179 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_36_247_-0.174412659175465_7.86698998079914_0.64019198239148 chr11 75955936 75957548 + 0.64019198239148 NA Intergenic Intergenic -30851 NM_001291159 380714 Mm.425697 NM_029548 ENSMUSG00000020847 Rph3al Gm1753|Noc2 rabphilin 3A-like (without C2 domains) protein-coding common_peak2_36_247_-0.174412659175465_7.86698998079914_0.64019198239148-2 chr8 124242433 124243564 + 0.64019198239148 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 11604 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_238_2249_-0.054604772011821_11.1084069000985_0.639878347013699 chr3 37419821 37421283 + 0.639878347013699 NA promoter-TSS (NM_153561) promoter-TSS (NM_153561) 602 NM_021343 57815 Mm.172679 NM_021343 ENSMUSG00000027722 Spata5 2510048F20Rik|C78064|Spaf spermatogenesis associated 5 protein-coding common_peak1_91_627_0.0970646775745951_9.34315308767892_0.639606712341855 chr8 46849847 46851580 + 0.639606712341855 NA Intergenic Intergenic 110968 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_86_672_-0.101664863944464_9.34363026263808_0.639606712341855 chr12 110978253 110979295 + 0.639606712341855 NA intron (NM_175207, intron 1 of 2) CpG 247 NM_175207 74251 Mm.250989 NM_175207 ENSMUSG00000037904 Ankrd9 2500003O20Rik ankyrin repeat domain 9 protein-coding common_peak2_143_1225_-0.0752209682590461_10.2221327795613_0.639285627975609 chr17 26675926 26677598 + 0.639285627975609 NA intron (NM_025272, intron 1 of 3) intron (NM_025272, intron 1 of 3) 366 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding common_peak2_298_2946_-0.0475656259556576_11.5012485321462_0.639108584149187 chr15 96459433 96462153 + 0.639108584149187 NA promoter-TSS (NM_028148) promoter-TSS (NM_028148) 50 NM_028148 72193 Mm.324474 NM_028148 ENSMUSG00000033228 Scaf11 1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013 SR-related CTD-associated factor 11 protein-coding common_peak2_96_765_-0.0958622185615479_9.53326947264418_0.638678276629973 chr17 29267962 29269881 + 0.638678276629973 NA 5' UTR (NM_030561, exon 1 of 9) 5' UTR (NM_030561, exon 1 of 9) 133 NM_030561 80748 Mm.290116 NM_030561 ENSMUSG00000052712 BC004004 2400006G15Rik cDNA sequence BC004004 protein-coding common_peak1_62_459_-0.123880890992593_8.78354960544808_0.638557832046107 chr2 178505369 178506233 + 0.638557832046107 NA Intergenic MIR|SINE|MIR 75286 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak1_12_48_0.314099089339368_5.77175938878489_0.638510577194945 chr11 83963843 83964162 + 0.638510577194945 NA promoter-TSS (NM_194341) promoter-TSS (NM_194341) -429 NM_194341 217030 Mm.82680 NM_194341 ENSMUSG00000034940 Synrg Ap1gbp1|SYNG synergin, gamma protein-coding common_peak1_12_48_0.314099089339368_5.77175938878489_0.638510577194945-2 chr3 88445630 88446013 + 0.638510577194945 NA intron (NM_001163489, intron 10 of 14) intron (NM_001163489, intron 10 of 14) -4870 NR_105978 102465611 NR_105978 ENSMUSG00000098655 Mir7011 Gm27677|mmu-mir-7011 microRNA 7011 ncRNA common_peak1_12_48_0.314099089339368_5.77175938878489_0.638510577194945-3 chr4 135314722 135315063 + 0.638510577194945 NA Intergenic Intergenic 38322 NM_016799 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding common_peak1_34_231_-0.176535280604038_7.76971335482555_0.637907655571166 chr1 87852675 87853237 + 0.637907655571166 NA promoter-TSS (NM_177646) promoter-TSS (NM_177646) -331 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak1_375_3886_-0.04147337135411_11.9037047066621_0.637714502420003 chr10 115313806 115316251 + 0.637714502420003 NA intron (NM_024454, intron 1 of 6) intron (NM_024454, intron 1 of 6) 563 NM_024454 216344 Mm.21936 NM_024454 ENSMUSG00000020132 Rab21 9630024B22 RAB21, member RAS oncogene family protein-coding common_peak1_132_1114_-0.0789276821453058_10.083364153735_0.637698345272963 chr8 69790624 69791962 + 0.637698345272963 NA exon (NM_133224, exon 1 of 26) exon (NM_133224, exon 1 of 26) 130 NM_133224 170759 Mm.186066 NM_133224 ENSMUSG00000031862 Atp13a1 Atp13a|Cgi152|catp ATPase type 13A1 protein-coding common_peak2_132_1114_-0.0789276821453058_10.083364153735_0.637698345272963 chr1 53796209 53798758 + 0.637698345272963 NA Intergenic Intergenic -12268 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak2_80_618_-0.107453516221385_9.22006884110357_0.63765382550116 chr9 59290783 59292414 + 0.63765382550116 NA promoter-TSS (NM_028121) promoter-TSS (NM_028121) 26 NM_028121 72141 Mm.22456 NM_028121 ENSMUSG00000025236 Adpgk 2610017G09Rik|Adp-gk|C77577 ADP-dependent glucokinase protein-coding common_peak1_58_356_0.125746141012726_8.54265333453546_0.637637485061371 chr2 166331744 166332658 + 0.637637485061371 NA Intergenic Intergenic 58293 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 OTTMUSG00000001131 predicted gene 11468 ncRNA common_peak2_345_3309_0.0432073409843277_11.7142191721867_0.637233366498231 chr5 147429402 147432034 + 0.637233366498231 NA exon (NM_028291, exon 1 of 19) exon (NM_028291, exon 1 of 19) 138 NM_028291 72587 Mm.320469 NM_028291 ENSMUSG00000029647 Pan3 2700050F09Rik|A430027N15Rik|AU014670 PAN3 poly(A) specific ribonuclease subunit protein-coding common_peak1_162_1291_0.0684540892274459_10.3696173993076_0.637206051610021 chr16 64851876 64853289 + 0.637206051610021 NA intron (NM_178647, intron 1 of 2) CpG 497 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak1_46_326_-0.150015738072065_8.27813895646205_0.637205929046191 chr6 22355579 22356322 + 0.637205929046191 NA intron (NM_138587, intron 1 of 9) CpG 131 NM_138587 27999 Mm.490307 NM_138587 ENSMUSG00000029672 Fam3c D6Wsu176e|Ilei family with sequence similarity 3, member C protein-coding common_peak1_185_1664_-0.0638774298846787_10.6693677470163_0.63714481129124-2 chr5 20944784 20947339 + 0.63714481129124 NA intron (NM_001080977, intron 1 of 7) B2_Mm1t|SINE|B2 -4928 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak1_185_1664_-0.0638774298846787_10.6693677470163_0.63714481129124 chr4 108999853 109001443 + 0.63714481129124 NA promoter-TSS (NM_146150) promoter-TSS (NM_146150) -157 NM_146150 230598 Mm.274950 NM_146150 ENSMUSG00000053510 Nrd1 2600011I06Rik|AI875733|NRD-C|Nrdc nardilysin, N-arginine dibasic convertase, NRD convertase 1 protein-coding common_peak2_68_511_-0.117404679753205_8.9412976601234_0.637111028495964 chr12 83949981 83951622 + 0.637111028495964 NA exon (NM_023633, exon 1 of 1) exon (NM_023633, exon 1 of 1) 193 NM_023633 71952 Mm.251483 NM_023633 ENSMUSG00000046791 2410016O06Rik MAPJD|NO66 RIKEN cDNA 2410016O06 gene protein-coding common_peak1_16_102_-0.282964266209047_6.5450183940787_0.637084967933602-5 chr2 3419287 3419763 + 0.637084967933602 NA intron (NM_008579, intron 1 of 2) intron (NM_008579, intron 1 of 2) 3123 NM_008579 104362 Mm.2688 NM_008579 ENSMUSG00000026650 Meig1 MLZ-278|Meg1 meiosis expressed gene 1 protein-coding unique_peak2_16_102_-0.282964266209047_6.5450183940787_0.637084967933602 chr10 117112272 117113136 + 0.637084967933602 NA intron (NM_177798, intron 1 of 9) ORR1B2|LTR|ERVL-MaLR 35770 NM_177798 327826 Mm.135965 NM_177798 ENSMUSG00000020170 Frs2 4732458E18|C330018A15Rik|Frs2alpha|SNT1 fibroblast growth factor receptor substrate 2 protein-coding common_peak1_16_102_-0.282964266209047_6.5450183940787_0.637084967933602 chr1 137898570 137898988 + 0.637084967933602 NA Intergenic Intergenic -67676 NR_029795 735252 NR_029795 ENSMUSG00000065565 Mir181a-1 Mirn181a-1|Mirn213|miR-213|mir-181a-1|mmu-mir-213 microRNA 181a-1 ncRNA common_peak1_16_102_-0.282964266209047_6.5450183940787_0.637084967933602-6 chr2 163703086 163703448 + 0.637084967933602 NA intron (NM_011106, intron 1 of 3) intron (NM_011106, intron 1 of 3) 9230 NM_011106 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding unique_peak2_16_102_-0.282964266209047_6.5450183940787_0.637084967933602-2 chr3 98339063 98340021 + 0.637084967933602 NA intron (NM_016966, intron 1 of 11) intron (NM_016966, intron 1 of 11) 427 NM_016966 236539 Mm.16898 NM_016966 ENSMUSG00000053398 Phgdh 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA 3-phosphoglycerate dehydrogenase protein-coding common_peak1_16_102_-0.282964266209047_6.5450183940787_0.637084967933602-3 chr11 107464193 107464619 + 0.637084967933602 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 6314 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_16_102_-0.282964266209047_6.5450183940787_0.637084967933602-7 chr4 88640758 88641134 + 0.637084967933602 NA Intergenic Intergenic 3513 NM_177347 230396 Mm.246592 NM_177347 ENSMUSG00000063376 Ifna13 - interferon alpha 13 protein-coding common_peak1_16_102_-0.282964266209047_6.5450183940787_0.637084967933602-4 chr15 66814246 66814627 + 0.637084967933602 NA intron (NM_009192, intron 1 of 8) intron (NM_009192, intron 1 of 8) 17393 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_16_102_-0.282964266209047_6.5450183940787_0.637084967933602-2 chr11 103381221 103381658 + 0.637084967933602 NA intron (NM_183034, intron 5 of 11) B1F|SINE|Alu -17747 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak2_158_1251_0.0698574346637795_10.3249475642645_0.637070570569111 chr14 59439501 59441835 + 0.637070570569111 NA promoter-TSS (NM_026908) promoter-TSS (NM_026908) 209 NM_001081024 239122 Mm.205022 NM_001081024 ENSMUSG00000071350 Setdb2 Clld8|Gm293|KMT1F SET domain, bifurcated 2 protein-coding common_peak1_121_1005_-0.083282827572198_9.93277317601943_0.637069422606737 chr10 88730425 88732147 + 0.637069422606737 NA promoter-TSS (NM_001037166) promoter-TSS (NM_001037166) -128 NM_025859 104303 Mm.291247 NM_025859 ENSMUSG00000060904 Arl1 2310008D22Rik|AU019749 ADP-ribosylation factor-like 1 protein-coding common_peak2_74_564_-0.111957349012883_9.08612838279611_0.636918784799029 chr15 102325625 102326958 + 0.636918784799029 NA intron (NM_027044, intron 1 of 5) CpG 175 NM_027044 56612 Mm.158264 NM_020031 ENSMUSG00000001289 Pfdn5 1190001O17Rik|1700010A06Rik|D15Ertd697e|Eig1|MM-1 prefoldin 5 protein-coding common_peak1_54_391_-0.133418825729292_8.54800043125056_0.636736843541518 chr11 96034557 96035411 + 0.636736843541518 NA promoter-TSS (NM_033568) promoter-TSS (NM_033568) 67 NM_033568 27681 Mm.372235 NM_033568 ENSMUSG00000006058 Snf8 D11Moh34 SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) protein-coding common_peak1_61_379_0.123438907589716_8.6315750621258_0.636580816292664 chr8 94433304 94434337 + 0.636580816292664 NA non-coding (NR_015514, exon 3 of 3) non-coding (NR_015514, exon 3 of 3) 1283 NR_015514 320377 Mm.486022 NR_015514 9330175E14Rik A630085K21 RIKEN cDNA 9330175E14 gene ncRNA common_peak2_148_1275_-0.0724876116572482_10.2811688079362_0.63656070579163 chr17 15040652 15042354 + 0.63656070579163 NA promoter-TSS (NM_001123368).2 promoter-TSS (NM_001123368).2 56 NM_001123368 100041586 Mm.440445 NM_001123368 ENSMUSG00000079710 Gm3417 - predicted gene 3417 protein-coding common_peak2_95_662_0.0941350303522199_9.4199325752887_0.63648250447838 chr11 34062387 34064765 + 0.63648250447838 NA intron (NM_010696, intron 3 of 20) intron (NM_010696, intron 3 of 20) 16375 NM_010696 16822 Mm.265350 NM_010696 ENSMUSG00000002699 Lcp2 AI323664|BB161688|SLP-76|SLP76|m1Khoe|twm lymphocyte cytosolic protein 2 protein-coding common_peak1_17_75_0.256757848429082_6.37630643765813_0.636428116832682-3 chr9 22388833 22389182 + 0.636428116832682 NA 5' UTR (NM_028390, exon 1 of 24) 5' UTR (NM_028390, exon 1 of 24) 199 NM_028390 68743 Mm.282751 NM_028390 ENSMUSG00000036777 Anln 1110037A17Rik|2900037I21Rik|C78101|Scraps anillin, actin binding protein protein-coding common_peak1_17_75_0.256757848429082_6.37630643765813_0.636428116832682 chr4 116993980 116994427 + 0.636428116832682 NA intron (NM_009478, intron 1 of 9) intron (NM_009478, intron 1 of 9) 210 NM_009478 22275 Mm.46484 NM_009478 ENSMUSG00000028684 Urod AI323803|UPD|Uro-d uroporphyrinogen decarboxylase protein-coding common_peak1_17_75_0.256757848429082_6.37630643765813_0.636428116832682-2 chr5 135545563 135546051 + 0.636428116832682 NA promoter-TSS (NM_146001) promoter-TSS (NM_146001) -685 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding unique_peak2_17_75_0.256757848429082_6.37630643765813_0.636428116832682-2 chr7 66308655 66309280 + 0.636428116832682 NA intron (NM_146191, intron 6 of 33) intron (NM_146191, intron 6 of 33) 72757 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA unique_peak2_17_75_0.256757848429082_6.37630643765813_0.636428116832682 chr1 87078129 87078967 + 0.636428116832682 NA Intergenic MMVL30-int|LTR|ERV1 11380 NM_007433 11650 Mm.195224 NM_007433 ENSMUSG00000026246 Alppl2 Akp5|C77216|D1Ertd816e|EAP alkaline phosphatase, placental-like 2 protein-coding common_peak2_114_936_-0.0853388466873568_9.82923581431551_0.636408189828569 chr10 81266072 81267339 + 0.636408189828569 NA intron (NM_025317, intron 1 of 2) CpG 221 NM_025317 66047 Mm.43397 NM_025317 ENSMUSG00000034932 Mrpl54 0610008M19Rik|D10Sut1e mitochondrial ribosomal protein L54 protein-coding common_peak1_45_258_0.14826482759331_8.09094070148321_0.636272392932908 chr11 69011872 69012615 + 0.636272392932908 NA Intergenic RLTR34C_MM|LTR|ERVK -3668 NM_001281465 68964 Mm.285785 NM_001013256 ENSMUSG00000020898 Ctc1 1500010J02Rik|AAF-132|AAF132 CTS telomere maintenance complex component 1 protein-coding common_peak2_704_8008_0.0279647861458514_12.9813887973847_0.636194453684821 chr11 69095035 69101106 + 0.636194453684821 NA promoter-TSS (NM_011065) promoter-TSS (NM_011065) -886 NM_011065 18626 Mm.7373 NM_011065 ENSMUSG00000020893 Per1 Hftm|Per|m-rigui|mPer1 period circadian clock 1 protein-coding common_peak1_346_3321_0.0430936383289779_11.7193831771269_0.636036821816589 chr10 7954571 7957274 + 0.636036821816589 NA 5' UTR (NM_138667, exon 1 of 7) 5' UTR (NM_138667, exon 1 of 7) 201 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_224_1934_0.0561663734111804_10.9462010377374_0.63585256557011 chr16 91484236 91486212 + 0.63585256557011 NA promoter-TSS (NM_010508) promoter-TSS (NM_010508) 9 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 CD118|Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding common_peak2_79_525_0.105439860711186_9.0916389196479_0.635686713875622 chr19 4878115 4879483 + 0.635686713875622 NA promoter-TSS (NM_013456) promoter-TSS (NM_013456) 109 NM_001168517 70605 Mm.36885 NM_027476 ENSMUSG00000006463 Zdhhc24 5730496N17Rik|Leng4 zinc finger, DHHC domain containing 24 protein-coding common_peak2_102_724_0.0897106988744429_9.54669253433952_0.635517376352746 chr4 141444048 141446102 + 0.635517376352746 NA intron (NM_009541, intron 1 of 15) CpG 402 NM_009541 22642 Mm.389590 NM_009541 ENSMUSG00000006215 Zbtb17 AA589413|Lp-1|Miz1|Zfp100|mZ13 zinc finger and BTB domain containing 17 protein-coding common_peak1_197_1648_0.0606910915630525_10.717721229219_0.635286840628814 chr1 75235832 75237539 + 0.635286840628814 NA promoter-TSS (NM_001159885) promoter-TSS (NM_001159885) -17 NM_001159885 56812 Mm.489660 NM_020266 ENSMUSG00000026203 Dnajb2 2700059H22Rik|Dnajb10|Hsj1|mDj8 DnaJ heat shock protein family (Hsp40) member B2 protein-coding common_peak1_73_475_0.111578199089823_8.95060686285285_0.635071053114258 chr19 4134506 4135630 + 0.635071053114258 NA TTS (NM_144532) TTS (NM_144532) 4541 NM_144532 73660 Mm.379226 NM_144532 ENSMUSG00000024842 Cabp4 2410038D05Rik calcium binding protein 4 protein-coding common_peak1_57_416_-0.128627947745738_8.63958959957179_0.634895660291063 chr4 59805682 59806813 + 0.634895660291063 NA intron (NM_172468, intron 1 of 8) CpG 597 NM_172468 209131 Mm.259705 NM_172468 ENSMUSG00000028385 Snx30 4732481H14Rik|C030041J06Rik sorting nexin family member 30 protein-coding common_peak1_32_216_-0.1842312847836_7.66943559005268_0.634697069157033 chr19 6922131 6922722 + 0.634697069157033 NA promoter-TSS (NM_007953) promoter-TSS (NM_007953) -618 NM_007953 26379 Mm.386776 NM_007953 ENSMUSG00000024955 Esrra ERRalpha|Err1|Estrra|Nr3b1 estrogen related receptor, alpha protein-coding common_peak1_32_216_-0.1842312847836_7.66943559005268_0.634697069157033-2 chr3 100921614 100922302 + 0.634697069157033 NA promoter-TSS (NM_194343) promoter-TSS (NM_194343) -535 NM_001165952 229644 Mm.189351 NM_194343 ENSMUSG00000033233 Trim45 4921530N01Rik tripartite motif-containing 45 protein-coding common_peak2_159_1261_0.0694749662072951_10.3362336780862_0.634470126535584 chr1 184844424 184846781 + 0.634470126535584 NA exon (NM_133684, exon 1 of 8) exon (NM_133684, exon 1 of 8) 245 NM_133684 67247 Mm.177724 NM_133684 ENSMUSG00000073481 Marc2 2810484M10Rik|Mosc2|mARC1 mitochondrial amidoxime reducing component 2 protein-coding unique_peak2_31_161_0.1830155714269_7.43135778859807_0.6342361743404 chr14 121954859 121956235 + 0.6342361743404 NA intron (NM_183031, intron 1 of 1) intron (NM_183031, intron 1 of 1) 9646 NM_183031 321019 Mm.265618 NM_183031 ENSMUSG00000051212 Gpr183 Ebi2 G protein-coupled receptor 183 protein-coding common_peak1_31_161_0.1830155714269_7.43135778859807_0.6342361743404 chr11 79961790 79962392 + 0.6342361743404 NA intron (NM_144826, intron 1 of 18) intron (NM_144826, intron 1 of 18) 296 NM_144826 216987 Mm.274961 NM_144826 ENSMUSG00000035575 Utp6 4732497O03Rik|HCA66 UTP6 small subunit processome component protein-coding common_peak1_31_161_0.1830155714269_7.43135778859807_0.6342361743404-3 chr8 36081386 36082030 + 0.6342361743404 NA Intergenic Intergenic -13120 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak1_31_161_0.1830155714269_7.43135778859807_0.6342361743404-2 chr5 24383750 24384238 + 0.6342361743404 NA TTS (NM_001002897) TTS (NM_001002897) 8149 NM_001002897 213948 Mm.332252 NM_001002897 ENSMUSG00000038295 Atg9b Apg912|Apg9l2|Apgdc2|Gm574|Nos3as|eONE|sONE autophagy related 9B protein-coding common_peak1_137_1164_-0.0769066081084926_10.1476609354874_0.634205293010285 chr4 8841480 8843023 + 0.634205293010285 NA intron (NM_001277149, intron 19 of 37) intron (NM_001277149, intron 19 of 37) 151845 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_49_350_-0.14269971698182_8.38397736181365_0.634029843185333 chr10 128411630 128412368 + 0.634029843185333 NA intron (NR_104288, intron 1 of 6) intron (NR_104288, intron 1 of 6) 383 NM_026259 67588 Mm.294120 NM_026259 ENSMUSG00000025373 Rnf41 2210404G21Rik|4930511A05Rik|4933415P08Rik|D10Ertd722e|FLRF|Nrdp1 ring finger protein 41 protein-coding common_peak1_39_270_-0.164402502536738_7.9999477900855_0.633702646188034 chr18 38405801 38406469 + 0.633702646188034 NA Intergenic Intergenic -12840 NM_022996 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding common_peak2_39_270_-0.164402502536738_7.9999477900855_0.633702646188034 chr11 107466662 107468012 + 0.633702646188034 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 3383 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_153_1327_-0.071705579387503_10.3391866416532_0.633697824079973 chr11 82203007 82207206 + 0.633697824079973 NA Intergenic Intergenic -25294 NM_011329 20290 Mm.1283 NM_011329 ENSMUSG00000020702 Ccl1 BF534335|I-309|Scya1|Tca-3 chemokine (C-C motif) ligand 1 protein-coding common_peak1_44_309_-0.149945767709607_8.20115152141944_0.633542568923124-2 chr6 108540422 108541491 + 0.633542568923124 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 51213 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_44_309_-0.149945767709607_8.20115152141944_0.633542568923124 chr3 37456001 37456864 + 0.633542568923124 NA intron (NM_001310473, intron 11 of 16) intron (NM_001310473, intron 11 of 16) 36482 NM_021343 57815 Mm.172679 NM_021343 ENSMUSG00000027722 Spata5 2510048F20Rik|C78064|Spaf spermatogenesis associated 5 protein-coding common_peak2_478_4959_0.0352907024341995_12.2937697564913_0.633527588931344 chr3 90585790 90590903 + 0.633527588931344 NA Intergenic Intergenic -1901 NM_001195760 628324 Mm.33816 NM_001195760 ENSMUSG00000094018 S100a2 CaN19|EG628324|S100L S100 calcium binding protein A2 protein-coding common_peak1_19_86_0.248190731782048_6.56703886173975_0.633519138992805-2 chr13 5714096 5714557 + 0.633519138992805 NA Intergenic Intergenic 143766 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA unique_peak2_19_86_0.248190731782048_6.56703886173975_0.633519138992805 chr16 30265022 30265908 + 0.633519138992805 NA intron (NM_027904, intron 1 of 1) intron (NM_027904, intron 1 of 1) 2067 NM_027904 71756 Mm.290614 NM_027904 ENSMUSG00000023176 Cpn2 1300018K11Rik carboxypeptidase N, polypeptide 2 protein-coding unique_peak2_19_86_0.248190731782048_6.56703886173975_0.633519138992805-2 chr8 124259898 124260671 + 0.633519138992805 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 28890 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_19_86_0.248190731782048_6.56703886173975_0.633519138992805 chr1 69759276 69759815 + 0.633519138992805 NA Intergenic Intergenic -67425 NM_029160 66722 Mm.440554 NM_025728 ENSMUSG00000053153 Spag16 4921511D23Rik|4930524F24Rik|4930585K05Rik|AV261009|Pf20|Wdr29 sperm associated antigen 16 protein-coding unique_peak2_19_86_0.248190731782048_6.56703886173975_0.633519138992805-3 chr9 8042527 8043349 + 0.633519138992805 NA promoter-TSS (NM_199017) promoter-TSS (NM_199017) -115 NM_199017 234912 Mm.172430 NM_199017 ENSMUSG00000053070 9230110C19Rik - RIKEN cDNA 9230110C19 gene protein-coding common_peak1_19_86_0.248190731782048_6.56703886173975_0.633519138992805-3 chr17 87974319 87974765 + 0.633519138992805 NA promoter-TSS (NM_010830) promoter-TSS (NM_010830) -508 NM_010830 17688 Mm.18210 NM_010830 ENSMUSG00000005370 Msh6 AU044881|AW550279|GTBP|Gtmbp mutS homolog 6 protein-coding common_peak1_38_208_0.165584317526978_7.79015129084437_0.633329333073009 chr19 53479092 53479874 + 0.633329333073009 NA Intergenic Intergenic -14687 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_18_115_-0.257616791730682_6.72917259926223_0.633296424023813 chr11 102230262 102230690 + 0.633296424023813 NA promoter-TSS (NM_001284249) promoter-TSS (NM_001284249) -304 NM_001284250 15184 Mm.22665 NM_010412 ENSMUSG00000008855 Hdac5 AI426555|Hdac4|mHDA1|mKIAA0600 histone deacetylase 5 protein-coding common_peak1_18_115_-0.257616791730682_6.72917259926223_0.633296424023813-2 chr9 94610103 94610677 + 0.633296424023813 NA Intergenic MLT1B|LTR|ERVL-MaLR -59502 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak2_18_115_-0.257616791730682_6.72917259926223_0.633296424023813 chr4 45297059 45297514 + 0.633296424023813 NA intron (NM_027266, intron 1 of 8) intron (NM_027266, intron 1 of 8) 118 NM_027266 69934 Mm.46761 NM_027266 ENSMUSG00000035601 Trmt10b 2610042J10Rik|Rg9mtd3|Rnmtd3 tRNA methyltransferase 10B protein-coding unique_peak2_18_115_-0.257616791730682_6.72917259926223_0.633296424023813-2 chr11 115508332 115509285 + 0.633296424023813 NA intron (NM_008258, intron 1 of 4) RSINE1|SINE|B4 5562 NM_008258 15374 Mm.1775 NM_008258 ENSMUSG00000020737 Hn1 - hematological and neurological expressed sequence 1 protein-coding unique_peak2_18_115_-0.257616791730682_6.72917259926223_0.633296424023813 chr11 88144621 88145360 + 0.633296424023813 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) -24575 NM_001172099 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding unique_peak2_18_115_-0.257616791730682_6.72917259926223_0.633296424023813-3 chr7 46639435 46640383 + 0.633296424023813 NA promoter-TSS (NM_013789) promoter-TSS (NM_013789) -102 NM_013789 27414 Mm.76659 NM_013789 ENSMUSG00000030839 Sergef DelGEF|Gef|Gnef|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding common_peak1_81_626_-0.104266056550257_9.24018860452691_0.633197026978098 chr8 120533526 120535621 + 0.633197026978098 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) -1284 NM_001145897 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_371_3622_0.0410722528070142_11.8435052168568_0.63299611583914 chr11 106786339 106790116 + 0.63299611583914 NA intron (NM_007840, intron 1 of 12) CpG 267 NM_007840 13207 Mm.491096 NM_007840 ENSMUSG00000020719 Ddx5 2600009A06Rik|G17P1|HUMP68|Hlr1|p68 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 protein-coding common_peak2_115_946_-0.0853326785831037_9.84455427617683_0.632759776468946 chr8 46686585 46687555 + 0.632759776468946 NA Intergenic Intergenic 52445 NR_045750 100503498 Mm.187358 NR_045750 ENSMUSG00000097534 Gm16675 - predicted gene, 16675 ncRNA common_peak2_86_584_0.100505016195086_9.24254532256831_0.632648213009627 chr19 34677035 34678994 + 0.632648213009627 NA intron (NM_172838, intron 3 of 6) intron (NM_172838, intron 3 of 6) 37125 NM_008331 15957 Mm.439751 NM_008331 ENSMUSG00000034459 Ifit1 ISG56|Ifi56|P56 interferon-induced protein with tetratricopeptide repeats 1 protein-coding common_peak2_101_811_-0.0910528288713639_9.61980950274949_0.632533414699805 chr19 57072022 57074364 + 0.632533414699805 NA intron (NM_001290813, intron 8 of 20) intron (NM_001290813, intron 8 of 20) 45831 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_267_2581_-0.0505049627847551_11.3090208039148_0.632459350234791 chr8 123042512 123043975 + 0.632459350234791 NA promoter-TSS (NM_001081379) promoter-TSS (NM_001081379) 668 NR_045268 100503178 Mm.294938 NR_045268 ENSMUSG00000099881 2810013P06Rik - RIKEN cDNA 2810013P06 gene ncRNA common_peak1_30_201_-0.191529278017488_7.56244684374305_0.632143705735556 chr1 21962854 21963569 + 0.632143705735556 NA promoter-TSS (NM_001310477) promoter-TSS (NM_001310477) -561 NM_001310477 226922 Mm.336519 NM_023872 ENSMUSG00000028033 Kcnq5 7730402H11|9230107O05Rik|AA589396|D1Mgi1 potassium voltage-gated channel, subfamily Q, member 5 protein-coding unique_peak2_30_201_-0.191529278017488_7.56244684374305_0.632143705735556 chr11 46361816 46363149 + 0.632143705735556 NA intron (NM_001281965, intron 4 of 16) intron (NM_001281965, intron 4 of 16) 27033 NM_001281968 16428 Mm.339927 NM_010583 ENSMUSG00000020395 Itk Emt|Tcsk|Tsk IL2 inducible T cell kinase protein-coding unique_peak2_30_201_-0.191529278017488_7.56244684374305_0.632143705735556-2 chr15 99364370 99365543 + 0.632143705735556 NA intron (NM_001310623, intron 1 of 24) intron (NM_001310623, intron 1 of 24) 5526 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak2_75_572_-0.108802502987302_9.10799007726325_0.632044155374697 chr4 152325110 152326749 + 0.632044155374697 NA intron (NR_102291, intron 1 of 4) CpG 203 NR_102291 19934 Mm.307846 NM_009079 ENSMUSG00000028936 Rpl22 2700038K18Rik ribosomal protein L22 protein-coding common_peak1_160_1271_0.0691139580746238_10.3474399343217_0.631909624316554 chr8 86856484 86858318 + 0.631909624316554 NA intron (NM_030563, intron 2 of 6) B3A|SINE|B2 27857 NM_030563 80750 Mm.25117 NM_030563 ENSMUSG00000031652 N4bp1 AI481586|C81621 NEDD4 binding protein 1 protein-coding common_peak2_52_374_-0.135005019940131_8.48324427541318_0.631879467059281 chr6 135011124 135012298 + 0.631879467059281 NA promoter-TSS (NM_026360) promoter-TSS (NM_026360) 99 NM_026360 67755 Mm.166524 NM_026360 ENSMUSG00000030204 Ddx47 4930588A18Rik|C77285 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein-coding unique_peak2_29_148_0.189487912135542_7.31391247652993_0.631794974520655 chr1 54492486 54493468 + 0.631794974520655 NA intron (NM_001163314, intron 22 of 26) intron (NM_001163314, intron 22 of 26) -53951 NM_001033194 98488 Mm.25856 NM_001033194 ENSMUSG00000041303 Gtf3c3 TF3C-gamma|TFIIIC102 general transcription factor IIIC, polypeptide 3 protein-coding unique_peak2_29_148_0.189487912135542_7.31391247652993_0.631794974520655-2 chr7 4788759 4789773 + 0.631794974520655 NA exon (NM_029384, exon 1 of 2) exon (NM_029384, exon 1 of 2) 294 NM_029384 664968 Mm.292837 NM_029384 ENSMUSG00000030431 Tmem238 2210411K11Rik transmembrane protein 238 protein-coding common_peak2_210_1935_-0.0582638981356318_10.8897312882068_0.631637891826195 chr4 59228913 59233367 + 0.631637891826195 NA Intergenic Intergenic -28911 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_138_1173_-0.0752319123174505_10.1596007369513_0.63158242828162 chr6 86471303 86473597 + 0.63158242828162 NA non-coding (NR_131126, exon 3 of 3) non-coding (NR_131126, exon 3 of 3) 8380 NR_131125 320486 Mm.391625 NR_131125 ENSMUSG00000085589 A430078I02Rik T25621 RIKEN cDNA A430078I02 gene ncRNA common_peak2_243_2305_-0.0534327242320884_11.1444604355357_0.631494136138866 chr10 62338565 62341531 + 0.631494136138866 NA promoter-TSS (NR_038038) promoter-TSS (NR_038038) 373 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak1_179_1599_-0.0644529298373815_10.611629724856_0.631462024977117 chr3 158030872 158032684 + 0.631462024977117 NA promoter-TSS (NM_001093753) promoter-TSS (NM_001093753) -24 NM_001093753 69207 Mm.223946 NM_026989 ENSMUSG00000055436 Srsf11 0610009J05Rik|2610019N13Rik|BF642805|Sfrs11 serine/arginine-rich splicing factor 11 protein-coding unique_peak2_43_244_0.149772114877736_8.01152399644144_0.63112124258925 chr1 187346199 187347975 + 0.63112124258925 NA intron (NM_026367, intron 9 of 9) intron (NM_026367, intron 9 of 9) 131576 NM_026367 67769 Mm.138321 NM_026367 ENSMUSG00000039210 Gpatch2 5830433G22Rik|5830436K05Rik|AI427714|AI447508|AW107440|AW491060|Gpatc2 G patch domain containing 2 protein-coding unique_peak2_43_244_0.149772114877736_8.01152399644144_0.63112124258925-2 chr3 69259026 69260456 + 0.63112124258925 NA Intergenic LTR37B|LTR|ERV1 37322 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding common_peak1_43_244_0.149772114877736_8.01152399644144_0.63112124258925 chr1 58953598 58954268 + 0.63112124258925 NA intron (NM_172406, intron 1 of 15) intron (NM_172406, intron 1 of 15) 19549 NM_172406 70827 Mm.222887 NM_172406 ENSMUSG00000026028 Trak2 2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549 trafficking protein, kinesin binding 2 protein-coding common_peak1_43_244_0.149772114877736_8.01152399644144_0.63112124258925-2 chr5 64092518 64093396 + 0.63112124258925 NA promoter-TSS (NM_025700) promoter-TSS (NM_025700) 7 NM_025700 66681 Mm.2325 NM_025700 ENSMUSG00000029171 Pgm1 3230402E02Rik|Pgm-1|Pgm2 phosphoglucomutase 1 protein-coding common_peak1_258_2477_-0.0516407116637208_11.2491401163087_0.630961085380118 chr19 10202644 10204990 + 0.630961085380118 NA promoter-TSS (NM_026919) promoter-TSS (NM_026919) 126 NM_007999 14156 Mm.2952 NM_007999 ENSMUSG00000024742 Fen1 AW538437|FEN-1 flap structure specific endonuclease 1 protein-coding common_peak1_112_916_-0.0852584254226532_9.79814871088373_0.630945549233156 chr6 48688609 48690512 + 0.630945549233156 NA intron (NM_175048, intron 2 of 4) RLTR53_Mm|LTR|ERVK 4982 NM_174990 107526 Mm.333048 NM_174990 ENSMUSG00000054435 Gimap4 AU019574|E430007K16Rik|Ian-1|Ian1|Imap4 GTPase, IMAP family member 4 protein-coding common_peak2_175_1556_-0.0649185528260183_10.572093952666_0.630915794262616 chr6 130123501 130130825 + 0.630915794262616 NA intron (NM_053151, intron 2 of 7) intron (NM_053151, intron 2 of 7) 2672 NM_010650 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding common_peak2_331_3342_-0.044197148076341_11.6848290655792_0.630853189025123 chr3 102993239 102997976 + 0.630853189025123 NA promoter-TSS (NM_025679) promoter-TSS (NM_025679) -133 NM_025679 66641 Mm.33937 NM_025679 ENSMUSG00000027854 Sike1 2810005O12Rik|5730470L24Rik|AI450236|AI839862|Sike|Sikeb suppressor of IKBKE 1 protein-coding common_peak2_229_2147_-0.0555995758272285_11.0409784900718_0.630841536358289 chr17 70989388 70992237 + 0.630841536358289 NA promoter-TSS (NM_023402) promoter-TSS (NM_023402) -296 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak2_98_783_-0.0932553803010432_9.56808215396468_0.630668104577556 chr12 110978083 110979836 + 0.630668104577556 NA promoter-TSS (NM_175207) promoter-TSS (NM_175207) 62 NM_175207 74251 Mm.250989 NM_175207 ENSMUSG00000037904 Ankrd9 2500003O20Rik ankyrin repeat domain 9 protein-coding common_peak1_59_364_0.123516090016681_8.57351069877572_0.63056486442591 chr2 5713514 5714568 + 0.63056486442591 NA intron (NM_177343, intron 1 of 10) CpG 721 NM_001290374 227541 Mm.191949 NM_177343 ENSMUSG00000039145 Camk1d A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK calcium/calmodulin-dependent protein kinase ID protein-coding common_peak2_276_2508_0.0493232936383574_11.3175584022284_0.630511100046303 chr10 62542367 62545264 + 0.630511100046303 NA Intergenic Intergenic 34642 NM_028197 72320 Mm.258955 NM_028197 ENSMUSG00000036955 Kif1bp 0710007C18Rik|2510003E04Rik|KBP|mKIAA1279 KIF1 binding protein protein-coding common_peak2_93_645_0.094353043918451_9.38256687665315_0.630473045239642 chr2 148680260 148681847 + 0.630473045239642 NA promoter-TSS (NM_028986) promoter-TSS (NM_028986) -67 NM_028986 74533 Mm.136913 NM_028986 ENSMUSG00000027439 Gzf1 8430437G08Rik|Zfp336|mGZF1 GDNF-inducible zinc finger protein 1 protein-coding unique_peak2_27_135_0.199101908767586_7.18701379563413_0.630395029105272-2 chr4 85005394 85006259 + 0.630395029105272 NA intron (NM_175275, intron 11 of 25) intron (NM_175275, intron 11 of 25) 121517 NM_177385 338349 Mm.440562 NM_175275 ENSMUSG00000038070 Cntln AI448092|B430108F07Rik|D530005L17Rik centlein, centrosomal protein protein-coding unique_peak2_27_135_0.199101908767586_7.18701379563413_0.630395029105272 chr19 47890423 47891518 + 0.630395029105272 NA Intergenic Intergenic 25176 NM_026619 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak1_27_135_0.199101908767586_7.18701379563413_0.630395029105272-2 chr4 119105558 119106206 + 0.630395029105272 NA Intergenic Intergenic -2863 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak1_27_135_0.199101908767586_7.18701379563413_0.630395029105272 chr2 142901024 142901695 + 0.630395029105272 NA exon (NM_001081133, exon 1 of 26) exon (NM_001081133, exon 1 of 26) 105 NM_001081133 16558 Mm.251934 NM_001081133 ENSMUSG00000038844 Kif16b 8430434E15Rik|AA623607|AI789011|C80253|C80902|mKIAA1590 kinesin family member 16B protein-coding common_peak2_27_135_0.199101908767586_7.18701379563413_0.630395029105272 chr9 48479999 48480709 + 0.630395029105272 NA intron (NM_024233, intron 1 of 6) CpG 257 NM_024233 104444 Mm.21911 NM_024233 ENSMUSG00000032026 Rexo2 1810038D15Rik|AW107347|Rex2|Sfn|Smfn RNA exonuclease 2 protein-coding common_peak1_37_254_-0.167376922275611_7.91066497572105_0.630309778528975 chr11 34766047 34766720 + 0.630309778528975 NA intron (NM_033374, intron 1 of 51) RMER17C|LTR|ERVK 17522 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding common_peak1_21_98_0.230441122614342_6.74457718138678_0.63018373921618 chr11 75240444 75240908 + 0.63018373921618 NA intron (NM_177708, intron 1 of 1) intron (NM_177708, intron 1 of 1) 46683 NM_177708 237847 Mm.82661 NM_177708 ENSMUSG00000045287 Rtn4rl1 Ngr3|Ngrh2|Ngrl2 reticulon 4 receptor-like 1 protein-coding common_peak1_21_98_0.230441122614342_6.74457718138678_0.63018373921618-6 chr7 126286506 126286976 + 0.63018373921618 NA intron (NM_145587, intron 1 of 3) intron (NM_145587, intron 1 of 3) 14122 NM_145587 104175 Mm.29660 NM_145587 ENSMUSG00000042978 Sbk1 Sbk SH3-binding kinase 1 protein-coding common_peak1_21_98_0.230441122614342_6.74457718138678_0.63018373921618-4 chr14 54882910 54883320 + 0.63018373921618 NA promoter-TSS (NM_007537) promoter-TSS (NM_007537) -310 NM_007537 12050 Mm.6967 NM_007537 ENSMUSG00000089682 Bcl2l2 AW048834|Bcl-w|Gtrgal2|Gtrosa41|bclw|c98 BCL2-like 2 protein-coding unique_peak2_21_98_0.230441122614342_6.74457718138678_0.63018373921618 chr9 21917545 21918215 + 0.63018373921618 NA intron (NM_031874, intron 1 of 4) CpG 241 NM_031874 19340 Mm.260157 NM_031874 ENSMUSG00000019066 Rab3d C130057E11Rik RAB3D, member RAS oncogene family protein-coding common_peak1_21_98_0.230441122614342_6.74457718138678_0.63018373921618-5 chr14 78910986 78911530 + 0.63018373921618 NA intron (NM_173758, intron 3 of 25) CT-rich|Low_complexity|Low_complexity 62080 NM_173758 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding common_peak1_21_98_0.230441122614342_6.74457718138678_0.63018373921618-2 chr11 80067608 80068034 + 0.63018373921618 NA intron (NM_018776, intron 1 of 7) intron (NM_018776, intron 1 of 7) 13170 NM_001277106 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding common_peak1_21_98_0.230441122614342_6.74457718138678_0.63018373921618-3 chr11 83737667 83738217 + 0.63018373921618 NA Intergenic L1MA4|LINE|L1 -8998 NM_183249 66107 Mm.902 NM_183249 ENSMUSG00000051748 Wfdc21 1100001G20Rik|Wdnm1-like WAP four-disulfide core domain 21 protein-coding common_peak1_21_98_0.230441122614342_6.74457718138678_0.63018373921618-7 chr9 116122492 116122967 + 0.63018373921618 NA intron (NM_009371, intron 4 of 7) ID_B1|SINE|B4 52634 NM_029575 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak2_232_2021_0.0545442789708339_11.0088394213884_0.629906226764995 chr16 91483863 91486631 + 0.629906226764995 NA promoter-TSS (NM_010508) promoter-TSS (NM_010508) 32 NM_010508 15975 Mm.502 NM_010508 ENSMUSG00000022967 Ifnar1 CD118|Ifar|Ifnar|Ifrc|Infar interferon (alpha and beta) receptor 1 protein-coding common_peak2_47_333_-0.1433165131956_8.31204603587625_0.629788212551556 chr5 115651998 115653061 + 0.629788212551556 NA intron (NM_001080808, intron 7 of 8) intron (NM_001080808, intron 7 of 8) 6956 NR_105997 102465623 NR_105997 ENSMUSG00000099254 Mir7030 Gm27267|mmu-mir-7030 microRNA 7030 ncRNA common_peak1_26_171_-0.204057187862503_7.32423616077085_0.629724416255218-2 chr6 72380045 72380668 + 0.629724416255218 NA intron (NM_016872, intron 1 of 2) CpG 112 NM_016872 53620 Mm.440321 NM_016872 ENSMUSG00000073002 Vamp5 AF119384|Camp vesicle-associated membrane protein 5 protein-coding common_peak1_26_171_-0.204057187862503_7.32423616077085_0.629724416255218 chr6 48710733 48711273 + 0.629724416255218 NA Intergenic B3|SINE|B2 -2759 NM_153175 231931 Mm.321047 NM_153175 ENSMUSG00000047867 Gimap6 4833419H03Rik|Ian6|mFLJ00102 GTPase, IMAP family member 6 protein-coding common_peak2_26_171_-0.204057187862503_7.32423616077085_0.629724416255218-2 chr11 54491671 54493119 + 0.629724416255218 NA intron (NM_173753, intron 9 of 17) intron (NM_173753, intron 9 of 17) -30450 NM_001252494 192786 Mm.254404 NM_175258 ENSMUSG00000037533 Rapgef6 A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052 Rap guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak2_26_171_-0.204057187862503_7.32423616077085_0.629724416255218 chr1 101901899 101902979 + 0.629724416255218 NA Intergenic IAPEY4_I-int|LTR|ERVK 746671 NR_037989 100504525 Mm.87065 NR_037989 ENSMUSG00000100684 Gm20268 - predicted gene, 20268 ncRNA common_peak2_55_399_-0.130679128570444_8.5785166254895_0.62970163674439 chr9 107887334 107888940 + 0.62970163674439 NA promoter-TSS (NM_028369) promoter-TSS (NM_028369) 8 NM_028369 72825 Mm.38037 NM_028369 ENSMUSG00000032583 Mon1a 2810468K17Rik MON1 homolog A, secretory traffciking associated protein-coding common_peak1_274_2662_-0.0494401079463778_11.3541166592374_0.629608059131049 chr7 143548076 143549794 + 0.629608059131049 NA promoter-TSS (NM_001285490) promoter-TSS (NM_001285490) -107 NM_001285490 17955 Mm.294625 NM_008672 ENSMUSG00000059119 Nap1l4 2810410H14Rik|AI316776|D7Wsu30e|Nap2 nucleosome assembly protein 1-like 4 protein-coding common_peak1_85_662_-0.100525578672283_9.32260227077645_0.629529910257563 chr4 145194141 145195136 + 0.629529910257563 NA intron (NM_001276465, intron 1 of 69) CpG 367 NM_001276465 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding common_peak1_13_82_-0.315086992515354_6.21749593508925_0.629493032588487 chr4 135475791 135476169 + 0.629493032588487 NA intron (NM_028995, intron 5 of 11) intron (NM_028995, intron 5 of 11) 18524 NM_028995 74552 Mm.26548 NM_028995 ENSMUSG00000028803 Nipal3 9130020G22Rik|AI480660|Npal3 NIPA-like domain containing 3 protein-coding unique_peak2_23_110_0.219359601741989_6.9040956672211_0.629368628758411-2 chr7 128392077 128393066 + 0.629368628758411 NA intron (NM_026418, intron 3 of 4) intron (NM_026418, intron 3 of 4) 25601 NM_026418 67865 Mm.18635 NM_026418 ENSMUSG00000030844 Rgs10 2310010N19Rik regulator of G-protein signalling 10 protein-coding common_peak2_23_110_0.219359601741989_6.9040956672211_0.629368628758411-3 chr18 11935457 11936480 + 0.629368628758411 NA intron (NM_022021, intron 6 of 8) intron (NM_022021, intron 6 of 8) -95530 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA unique_peak2_20_129_-0.244893169229957_6.89992122841348_0.629368628758411 chr4 145306223 145307226 + 0.629368628758411 NA intron (NM_009401, intron 1 of 12) intron (NM_009401, intron 1 of 12) 8423 NM_009401 21941 Mm.12810 NM_009401 ENSMUSG00000028602 Tnfrsf8 Cd30|D1S166E|Ki|Ki-1 tumor necrosis factor receptor superfamily, member 8 protein-coding common_peak2_23_110_0.219359601741989_6.9040956672211_0.629368628758411-4 chrX 104669070 104669922 + 0.629368628758411 NA intron (NM_175358, intron 1 of 11) intron (NM_175358, intron 1 of 11) 1568 NM_175358 108672 Mm.30574 NM_175358 ENSMUSG00000033906 Zdhhc15 6030457O13Rik zinc finger, DHHC domain containing 15 protein-coding common_peak1_20_129_-0.244893169229957_6.89992122841348_0.629368628758411 chr3 121370418 121370933 + 0.629368628758411 NA Intergenic Intergenic -55866 NM_028044 71994 Mm.275555 NM_028044 ENSMUSG00000053931 Cnn3 1600014M03Rik|C85854|Calpo3 calponin 3, acidic protein-coding unique_peak2_23_110_0.219359601741989_6.9040956672211_0.629368628758411-3 chr9 22259376 22260124 + 0.629368628758411 NA intron (NM_181419, intron 1 of 4) CpG 145 NM_181419 235048 Mm.292381 NM_181419 ENSMUSG00000062794 Zfp599 6720416P20 zinc finger protein 599 protein-coding unique_peak2_23_110_0.219359601741989_6.9040956672211_0.629368628758411 chr19 53191702 53192656 + 0.629368628758411 NA intron (NM_013758, intron 1 of 15) intron (NM_013758, intron 1 of 15) 48182 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding unique_peak2_20_129_-0.244893169229957_6.89992122841348_0.629368628758411-2 chr5 23604259 23605111 + 0.629368628758411 NA intron (NM_009274, intron 1 of 14) intron (NM_009274, intron 1 of 14) 11886 NM_009274 20817 Mm.288728 NM_009274 ENSMUSG00000062604 Srpk2 AW226533|AW492537|AW547358|Wbp6|mSRPK2 serine/arginine-rich protein specific kinase 2 protein-coding common_peak2_23_110_0.219359601741989_6.9040956672211_0.629368628758411 chr12 25993439 25994293 + 0.629368628758411 NA Intergenic Intergenic 216639 NR_131149 629481 Mm.390460 NR_131149 Gm29687 - predicted gene, 29687 ncRNA common_peak2_23_110_0.219359601741989_6.9040956672211_0.629368628758411-2 chr17 35209575 35210347 + 0.629368628758411 NA Intergenic Intergenic -4610 NM_010735 16992 Mm.87787 NM_010735 ENSMUSG00000024402 Lta LT|LT-[a]|LT-alpha|LT[a]|LTalpha|Ltx|TNF-beta|TNFSF1|Tnfb|Tnfsf1b|Tnlg1e|hlb382 lymphotoxin A protein-coding common_peak1_42_293_-0.153945174582413_8.12269975754516_0.629043326124128 chr11 117115119 117115819 + 0.629043326124128 NA intron (NM_028777, intron 1 of 16) CpG 297 NM_001166506 74136 Mm.272312 NM_028777 ENSMUSG00000020823 Sec14l1 1200017E04Rik|2810012L19Rik|Naa-35 SEC14-like lipid binding 1 protein-coding common_peak2_446_4552_0.0364577742417076_12.1708306311401_0.62890254971612 chr13 45388973 45393539 + 0.62890254971612 NA exon (NM_153789, exon 2 of 7) exon (NM_153789, exon 2 of 7) 1514 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak2_51_303_0.134106042383703_8.31498053463544_0.628755187262742 chr9 119743405 119744926 + 0.628755187262742 NA Intergenic LTR33|LTR|ERVL -25133 NM_001205321 20264 Mm.247042 NM_009134 ENSMUSG00000034533 Scn10a Nav1.8|PN3|SNS sodium channel, voltage-gated, type X, alpha protein-coding common_peak1_147_1264_-0.071913395997548_10.2689649715829_0.628588665567255 chr8 70527215 70528419 + 0.628588665567255 NA promoter-TSS (NM_010223) promoter-TSS (NM_010223) -29 NM_001199631 14232 Mm.141864 NM_010223 ENSMUSG00000019428 Fkbp8 38kDa|FKBP-38|FKBP-8|Fkbp38 FK506 binding protein 8 protein-coding common_peak2_153_1203_0.0697141751997208_10.2684767643596_0.628588665567255 chr7 88205498 88208279 + 0.628588665567255 NA Intergenic Intergenic -71197 NM_009982 13032 Mm.89295 NM_009982 ENSMUSG00000030560 Ctsc AI047818|CatC|DPP1|DPPI cathepsin C protein-coding common_peak2_82_635_-0.103377086116007_9.26119441222635_0.628322149707598 chr18 39184652 39186648 + 0.628322149707598 NA intron (NM_175164, intron 11 of 22) intron (NM_175164, intron 11 of 22) 192505 NM_175164 71302 Mm.329396 NM_175164 ENSMUSG00000036452 Arhgap26 1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621 Rho GTPase activating protein 26 protein-coding unique_peak2_36_195_0.165073807096202_7.69724674766331_0.628257057274284 chr5 127484668 127485913 + 0.628257057274284 NA intron (NM_175432, intron 3 of 8) intron (NM_175432, intron 3 of 8) 132102 NM_133895 100561 Mm.28506 NM_133895 ENSMUSG00000029416 Slc15a4 AA987064|AW742963|C130069N12Rik|PHT1|PTR4 solute carrier family 15, member 4 protein-coding common_peak1_24_157_-0.217765556040719_7.19489797015674_0.62814292805558-2 chr5 21424898 21425439 + 0.62814292805558 NA promoter-TSS (NM_029195) promoter-TSS (NM_029195) 265 NM_177869 330050 Mm.40655 NM_177869 ENSMUSG00000047221 Fam185a 4631428I10|AI847670 family with sequence similarity 185, member A protein-coding common_peak1_24_157_-0.217765556040719_7.19489797015674_0.62814292805558 chr1 43466067 43466703 + 0.62814292805558 NA intron (NM_010879, intron 1 of 4) intron (NM_010879, intron 1 of 4) 20634 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding unique_peak2_24_157_-0.217765556040719_7.19489797015674_0.62814292805558 chr16 24154385 24155472 + 0.62814292805558 NA Intergenic Intergenic -166316 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_122_906_0.0806190406901877_9.86526826087362_0.628133870971197 chr5 115506652 115507650 + 0.628133870971197 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 475 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak2_97_680_0.0919775600849686_9.45749976805456_0.627890286299432 chr1 156558218 156559918 + 0.627890286299432 NA exon (NM_009595, exon 1 of 12) exon (NM_009595, exon 1 of 12) 281 NM_001136104 11352 Mm.329515 NM_009595 ENSMUSG00000026596 Abl2 AA536808|Abll|Arg v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) protein-coding common_peak2_97_680_0.0919775600849686_9.45749976805456_0.627890286299432-2 chr16 92057557 92059029 + 0.627890286299432 NA promoter-TSS (NM_080456) promoter-TSS (NM_080456) -29 NM_017391 53881 Mm.217354 NM_017391 ENSMUSG00000089774 Slc5a3 AA623876|BF642829|Smit1 solute carrier family 5 (inositol transporters), member 3 protein-coding common_peak2_25_123_0.201224934254057_7.0548087775139_0.627875562968904 chr14 53946166 53946873 + 0.627875562968904 NA Intergenic Intergenic 307410 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak2_22_143_-0.231464197348802_7.05419290276791_0.627875562968904 chr4 132971937 132973203 + 0.627875562968904 NA Intergenic CT-rich|Low_complexity|Low_complexity -1525 NM_010208 14191 Mm.271665 NM_010208 ENSMUSG00000028874 Fgr - FGR proto-oncogene, Src family tyrosine kinase protein-coding common_peak1_22_143_-0.231464197348802_7.05419290276791_0.627875562968904 chr11 53857474 53857934 + 0.627875562968904 NA intron (NR_033332, intron 1 of 3) intron (NR_033332, intron 1 of 3) 1552 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA unique_peak2_25_123_0.201224934254057_7.0548087775139_0.627875562968904 chr9 45275415 45276410 + 0.627875562968904 NA Intergenic Intergenic -6766 NM_008348 16154 Mm.379327 NM_008348 ENSMUSG00000032089 Il10ra AW553859|CDw210|CDw210a|IL-10R1|IL-10RA|Il10r|mIL-10R interleukin 10 receptor, alpha protein-coding unique_peak2_22_143_-0.231464197348802_7.05419290276791_0.627875562968904-2 chrX 33844192 33845010 + 0.627875562968904 NA Intergenic MMVL30-int|LTR|ERV1 -142252 NM_001145038 100040732 Mm.465135 NM_001145038 ENSMUSG00000078324 Btbd35f14 Gm2933 BTB domain containing 35, family member 14 protein-coding common_peak1_25_123_0.201224934254057_7.0548087775139_0.627875562968904 chr10 121474541 121475109 + 0.627875562968904 NA intron (NM_138956, intron 1 of 4) intron (NM_138956, intron 1 of 4) 1425 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding common_peak2_87_593_0.0987032442658968_9.26367074293372_0.627789316644062 chr14 32200987 32202631 + 0.627789316644062 NA promoter-TSS (NM_011960) promoter-TSS (NM_011960) 82 NM_016897 53600 Mm.303703 NM_016897 ENSMUSG00000013701 Timm23 Tim23 translocase of inner mitochondrial membrane 23 protein-coding common_peak2_304_2829_0.0460387002060472_11.4896056878223_0.627614650697029 chr18 79076871 79082053 + 0.627614650697029 NA intron (NM_053099, intron 2 of 5) (GAGAA)n|Simple_repeat|Simple_repeat 29929 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_58_425_-0.129183215184012_8.67011801263383_0.627517350444865 chr1 37864517 37865406 + 0.627517350444865 NA intron (NM_001290720, intron 1 of 17) CpG 121 NM_207228 211484 Mm.332756 NM_207228 ENSMUSG00000060771 Tsga10 4933432N21Rik|AI843383|Gm217|Mtsga10 testis specific 10 protein-coding common_peak1_35_238_-0.169569134921725_7.81608224051989_0.627415141895972 chr15 60104615 60105368 + 0.627415141895972 NA Intergenic L1_Mus4|LINE|L1 -88373 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_210_1785_0.05808297401774_10.8315578521301_0.62736919252969 chr4 133094953 133097902 + 0.62736919252969 NA Intergenic RLTR4_Mm|LTR|ERV1 -34206 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak2_54_325_0.132562864154838_8.4150095863085_0.62718899296729 chr2 3762816 3764985 + 0.62718899296729 NA intron (NM_025626, intron 1 of 3) (TATG)n|Simple_repeat|Simple_repeat 50442 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_164_1440_-0.0674290856355473_10.459140077357_0.626972673134937 chr7 5078759 5081260 + 0.626972673134937 NA promoter-TSS (NM_001252454) promoter-TSS (NM_001252454) -226 NM_010147 13854 Mm.3091 NM_010147 ENSMUSG00000035203 Epn1 AA269831|Ibp1 epsin 1 protein-coding common_peak2_201_1691_0.058946651671862_10.7539871789559_0.626963069146324 chr8 105990903 105994512 + 0.626963069146324 NA promoter-TSS (NM_001301205) promoter-TSS (NM_001301205) -934 NM_001301205 319446 Mm.248357 NM_176913 ENSMUSG00000053687 Dpep2 F630103D06Rik|MBD-2 dipeptidase 2 protein-coding common_peak2_61_450_-0.123689107334718_8.75513906958802_0.626845170537066 chr13 59556472 59557496 + 0.626845170537066 NA promoter-TSS (NM_001284219) promoter-TSS (NM_001284219) -62 NM_001284219 67269 Mm.153008 NM_023328 ENSMUSG00000021557 Agtpbp1 1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd ATP/GTP binding protein 1 protein-coding common_peak1_241_2282_-0.0535359884028974_11.1299471500233_0.626817481943789 chr9 121856914 121858584 + 0.626817481943789 NA 5' UTR (NM_019814, exon 1 of 4) 5' UTR (NM_019814, exon 1 of 4) 251 NM_019814 56295 Mm.347915 NM_019814 ENSMUSG00000038412 Higd1a 2210020B17Rik|7420700H20Rik|AI303276|AW049839|HIMP1|Hig1 HIG1 domain family, member 1A protein-coding common_peak2_310_2898_0.0457597730726675_11.5242195045977_0.626801553895823 chr9 65402447 65406619 + 0.626801553895823 NA intron (NM_001033158, intron 2 of 4) intron (NM_001033158, intron 2 of 4) 6045 NM_001033158 70784 Mm.35827 NM_001033158 ENSMUSG00000041696 Rasl12 4631404I11Rik RAS-like, family 12 protein-coding common_peak2_46_266_0.142435155738463_8.13191350955679_0.626702455872793 chr12 100728431 100729909 + 0.626702455872793 NA Intergenic Intergenic -4142 NM_153587 73086 Mm.220417 NM_153587 ENSMUSG00000021180 Rps6ka5 3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK|RLSK|S6K-alpha-5 ribosomal protein S6 kinase, polypeptide 5 protein-coding common_peak1_46_266_0.142435155738463_8.13191350955679_0.626702455872793 chr11 62731158 62732085 + 0.626702455872793 NA Intergenic CpG -2528 NM_133208 170740 Mm.339982 NM_133208 ENSMUSG00000005267 Zfp287 B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74 zinc finger protein 287 protein-coding common_peak1_115_842_0.0824991159431985_9.76063837891368_0.626610017689408 chr15 98144965 98146272 + 0.626610017689408 NA promoter-TSS (NM_001170710) promoter-TSS (NM_001170710) 84 NM_030121 78541 Mm.200766 NM_030121 ENSMUSG00000048175 Asb8 4930539L19Rik|AI788835|C430011H06Rik ankyrin repeat and SOCS box-containing 8 protein-coding unique_peak2_10_63_-0.366814568492404_5.8165927157538_0.62651022444401 chr1 173802797 173803300 + 0.62651022444401 NA Intergenic Intergenic -36129 NM_008329 15951 Mm.261270 NM_008329 ENSMUSG00000073489 Ifi204 Ifi16|p204 interferon activated gene 204 protein-coding common_peak1_73_554_-0.109947998839703_9.06136996181762_0.626420312287565 chr14 14632927 14634058 + 0.626420312287565 NA Intergenic Intergenic -69533 NM_001033270 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding common_peak1_70_528_-0.113964366267009_8.99014172898052_0.625869672804948 chr12 78860567 78861493 + 0.625869672804948 NA intron (NM_023721, intron 1 of 8) intron (NM_023721, intron 1 of 8) 608 NM_023721 73834 Mm.311549 NM_023721 ENSMUSG00000021114 Atp6v1d 1110004P10Rik|Atp6m|VATD|Vma8 ATPase, H+ transporting, lysosomal V1 subunit D protein-coding common_peak2_81_542_0.103247188447421_9.13643198202807_0.625568092649622 chr7 139967546 139969539 + 0.625568092649622 NA Intergenic RMER17C2|LTR|ERVK 10213 NM_001033465 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding common_peak1_303_3004_-0.0463358274562324_11.5299813618704_0.625479406916104 chr18 73572643 73574724 + 0.625479406916104 NA exon (NM_001039214, exon 1 of 2) exon (NM_001039214, exon 1 of 2) 978 NM_001039214 240396 Mm.24131 NM_001039214 ENSMUSG00000037253 Mex3c A130001D14Rik|BC035207|BM-013|Rkhd2 mex3 RNA binding family member C protein-coding unique_peak2_34_181_0.173651074324837_7.59462017736112_0.625272286415303 chr11 75321926 75323162 + 0.625272286415303 NA intron (NM_026653, intron 5 of 16) intron (NM_026653, intron 5 of 16) 25839 NM_001164223 68275 Mm.102574 NM_026653 ENSMUSG00000000751 Rpa1 5031405K23Rik|70kDa|AA589576|AW557552|RF-A|RP-A|Rpa replication protein A1 protein-coding common_peak1_86_671_-0.0995195921129071_9.34255762672231_0.624972683038437 chr11 95000148 95001344 + 0.624972683038437 NA intron (NM_172261, intron 4 of 9) intron (NM_172261, intron 4 of 9) -9133 NM_146025 217125 Mm.297199 NM_146025 ENSMUSG00000047181 Samd14 AI839049|AI854782|BC034054 sterile alpha motif domain containing 14 protein-coding common_peak1_216_1849_0.0569087585961014_10.8817639347017_0.624786604071665 chr7 126976024 126977076 + 0.624786604071665 NA 5' UTR (NM_026638, exon 1 of 6) 5' UTR (NM_026638, exon 1 of 6) 636 NM_026638 52858 Mm.28219 NM_026638 ENSMUSG00000030682 Cdipt 9530042F15Rik|D7Bwg0575e|Pis|Pis1 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) protein-coding unique_peak2_45_317_-0.14780984000449_8.23897803528211_0.624726935228008 chr7 90041296 90043156 + 0.624726935228008 NA intron (NR_110364, intron 5 of 5) (TG)n|Simple_repeat|Simple_repeat 13067 NR_110364 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15 RIKEN cDNA E230029C05 gene ncRNA common_peak1_45_317_-0.14780984000449_8.23897803528211_0.624726935228008 chr4 126296700 126297426 + 0.624726935228008 NA intron (NM_199473, intron 2 of 3) intron (NM_199473, intron 2 of 3) 10269 NM_199473 329941 Mm.296327 NM_199473 ENSMUSG00000056174 Col8a2 AI429819 collagen, type VIII, alpha 2 protein-coding common_peak2_103_830_-0.0900587997567008_9.65367526689199_0.624711525290522 chr19 36374455 36376637 + 0.624711525290522 NA Intergenic Intergenic -3521 NM_029508 76073 Mm.259180 NM_029508 ENSMUSG00000024805 Pcgf5 0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127 polycomb group ring finger 5 protein-coding common_peak2_123_916_0.0791289035119647_9.88034237535104_0.624662352895843 chr19 45074345 45076216 + 0.624662352895843 NA promoter-TSS (NM_178929) promoter-TSS (NM_178929) -859 NM_178929 107250 Mm.24417 NM_178929 ENSMUSG00000025213 Kazald1 AI842353|Bono1|IGFBP-rP10 Kazal-type serine peptidase inhibitor domain 1 protein-coding common_peak2_91_628_0.0947692195869347_9.34430081667276_0.624474119081241 chr2 92374448 92376292 + 0.624474119081241 NA 5' UTR (NM_145122, exon 1 of 11) 5' UTR (NM_145122, exon 1 of 11) 131 NM_145122 18633 Mm.202782 NM_145122 ENSMUSG00000027222 Pex16 - peroxisomal biogenesis factor 16 protein-coding common_peak1_641_7428_-0.0292350640555252_12.8443347787232_0.62442362070814 chr4 134095998 134101099 + 0.62442362070814 NA Intergenic Intergenic -3475 NM_013706 23833 Mm.24130 NM_013706 ENSMUSG00000000682 Cd52 AI463198|B7|B7-Ag|CAMPATH-1|CLS1|MB7 CD52 antigen protein-coding common_peak1_14_59_0.275153525802829_6.04446735850993_0.624067979817114 chr15 38279039 38279385 + 0.624067979817114 NA Intergenic ID2|SINE|ID 21499 NM_013692 21847 Mm.4292 NM_013692 ENSMUSG00000037465 Klf10 AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF Kruppel-like factor 10 protein-coding unique_peak2_14_59_0.275153525802829_6.04446735850993_0.624067979817114 chr1 21338456 21339052 + 0.624067979817114 NA Intergenic B1_Mus1|SINE|Alu -10923 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_14_59_0.275153525802829_6.04446735850993_0.624067979817114-2 chr4 123904368 123904798 + 0.624067979817114 NA promoter-TSS (NM_019660) promoter-TSS (NM_019660) -430 NM_019660 56309 Mm.446553 NM_019660 ENSMUSG00000028647 Mycbp 5730488M09Rik|AW552132|AW742590|Amy-1 MYC binding protein protein-coding common_peak1_348_3549_-0.0425030120151391_11.7723518032718_0.623968809434086 chr9 121296944 121299872 + 0.623968809434086 NA Intergenic Intergenic -21236 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding common_peak2_60_372_0.121487630791735_8.6037756356511_0.623783432670072 chr7 90022426 90024254 + 0.623783432670072 NA Intergenic Intergenic -5819 NR_110365 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15 RIKEN cDNA E230029C05 gene ncRNA common_peak1_133_1122_-0.0759862010645218_10.0951491118683_0.623659753993539 chr7 66382990 66384390 + 0.623659753993539 NA intron (NM_146191, intron 1 of 33) intron (NM_146191, intron 1 of 33) -1966 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak1_33_223_-0.177206349897077_7.71875174710907_0.623587954906736-2 chr7 28311327 28312116 + 0.623587954906736 NA intron (NM_025616, intron 1 of 10) intron (NM_025616, intron 1 of 10) 325 NM_025616 66525 Mm.167913 NM_025616 ENSMUSG00000003438 Timm50 2810403L02Rik|AU015082|TIM50L translocase of inner mitochondrial membrane 50 protein-coding common_peak1_33_223_-0.177206349897077_7.71875174710907_0.623587954906736 chr11 4203291 4203961 + 0.623587954906736 NA intron (NM_134023, intron 1 of 8) intron (NM_134023, intron 1 of 8) -14625 NM_028022 71962 Mm.7852 NM_028022 ENSMUSG00000020424 Gatsl3 2410008K03Rik GATS protein-like 3 protein-coding common_peak1_93_736_-0.0957774104826949_9.47763210385372_0.623304388008606 chr16 32099084 32100054 + 0.623304388008606 NA promoter-TSS (NM_025892) promoter-TSS (NM_025892) 158 NM_001111025 72084 Mm.37613 NM_024464 ENSMUSG00000023791 Pigx 2010319C14Rik|PIG-X phosphatidylinositol glycan anchor biosynthesis, class X protein-coding common_peak2_69_443_0.113642159359785_8.85123694603_0.623190603703712 chr14 107075112 107075594 + 0.623190603703712 NA Intergenic (CATTC)n|Simple_repeat|Simple_repeat -588833 NR_045938 73631 Mm.48862 NR_045938 ENSMUSG00000099794 1700128A07Rik - RIKEN cDNA 1700128A07 gene ncRNA unique_peak2_66_419_0.1162981824836_8.77239460890792_0.62311518537927 chr13 24654339 24657511 + 0.62311518537927 NA intron (NM_001080381, intron 1 of 14) intron (NM_001080381, intron 1 of 14) 17277 NM_029679 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_172_1392_0.0652309888912956_10.4765950370469_0.62308219011731 chr11 49811340 49812864 + 0.62308219011731 NA intron (NM_013529, intron 6 of 18) Kanga1c|DNA|TcMar-Tc2 17947 NM_013529 14584 Mm.24402 NM_013529 ENSMUSG00000020363 Gfpt2 AI480523|GFAT2 glutamine fructose-6-phosphate transaminase 2 protein-coding common_peak1_139_1067_0.0739744052086913_10.0976831342919_0.623070611790378 chr11 109424676 109426722 + 0.623070611790378 NA promoter-TSS (NM_025275) promoter-TSS (NM_025275) -247 NM_025275 13929 Mm.211850 NM_025275 ENSMUSG00000020610 Amz2 AA408420|ESTM12|X83328 archaelysin family metallopeptidase 2 protein-coding common_peak2_381_3745_0.0398486329301058_11.8910595007081_0.622244528705579 chr17 35045777 35052629 + 0.622244528705579 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -1040 NM_033444 114584 Mm.29524 NM_033444 ENSMUSG00000007041 Clic1 Clcp|G6 chloride intracellular channel 1 protein-coding common_peak1_199_1670_0.0593561076342652_10.7361740718783_0.621967638610815 chr2 52741462 52742796 + 0.621967638610815 NA promoter-TSS (NM_019667) promoter-TSS (NM_019667) 20 NM_019667 56324 Mm.263639 NM_019667 ENSMUSG00000055371 Stam2 1200004O12Rik|5730456G07Rik|BB145015|Hbp signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 protein-coding common_peak1_259_2487_-0.0506316274249947_11.2554549564181_0.621947946967962 chr3 142881018 142882932 + 0.621947946967962 NA promoter-TSS (NM_178654) promoter-TSS (NM_178654) 29 NM_178654 109333 Mm.244236 NM_178654 ENSMUSG00000004591 Pkn2 6030436C20Rik|AI507382|PRK2|Prkcl2|Stk7 protein kinase N2 protein-coding common_peak1_39_216_0.156195306372653_7.83964888563081_0.621707899860676-2 chr7 29238317 29238957 + 0.621707899860676 NA intron (NM_029887, intron 1 of 7) intron (NM_029887, intron 1 of 7) 314 NM_029887 77254 Mm.36699 NM_029887 ENSMUSG00000030588 Yif1b 9430029K10Rik|Yip1b Yip1 interacting factor homolog B (S. cerevisiae) protein-coding common_peak1_39_216_0.156195306372653_7.83964888563081_0.621707899860676 chr1 44147931 44148519 + 0.621707899860676 NA intron (NM_011729, intron 1 of 14) intron (NM_011729, intron 1 of 14) 481 NM_011729 22592 Mm.2213 NM_011729 ENSMUSG00000026048 Ercc5 Xpg excision repair cross-complementing rodent repair deficiency, complementation group 5 protein-coding unique_peak2_39_216_0.156195306372653_7.83964888563081_0.621707899860676 chr13 44587347 44588894 + 0.621707899860676 NA Intergenic Intergenic -142654 NM_021878 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding common_peak2_48_341_-0.140976277975213_8.34736437589829_0.621701940089222 chr10 96206203 96208116 + 0.621701940089222 NA Intergenic ORR1A2|LTR|ERVL-MaLR -19048 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_48_341_-0.140976277975213_8.34736437589829_0.621701940089222 chr9 32615233 32616146 + 0.621701940089222 NA Intergenic MER44A|DNA|TcMar-Tigger -74237 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak2_52_310_0.134970995312509_8.34825626778686_0.621701940089222 chr2 153291009 153292308 + 0.621701940089222 NA intron (NM_008444, intron 1 of 8) CpG 242 NM_008444 16569 Mm.315560 NM_008444 ENSMUSG00000027475 Kif3b AI854312|AW549267|mKIAA0359 kinesin family member 3B protein-coding common_peak1_52_310_0.134970995312509_8.34825626778686_0.621701940089222 chr18 5592803 5593823 + 0.621701940089222 NA promoter-TSS (NR_033552) promoter-TSS (NR_033552) -876 NR_033552 791318 Mm.84339 NR_033552 ENSMUSG00000063087 Gm10125 ENSMUSG00000063087|Zeb1os predicted gene 10125 ncRNA common_peak2_77_590_-0.107458559383314_9.15328504048587_0.621577302808556-3 chrX 36743328 36746006 + 0.621577302808556 NA intron (NR_075097, intron 1 of 3) intron (NR_075097, intron 1 of 3) 1035 NR_075096 194744 Mm.336014 NM_001085497 ENSMUSG00000037636 Slc25a43 Gm8 solute carrier family 25, member 43 protein-coding common_peak2_77_590_-0.107458559383314_9.15328504048587_0.621577302808556 chr10 99598826 99600654 + 0.621577302808556 NA Intergenic IAPLTR2_Mm|LTR|ERVK -9431 NR_038019 100504202 Mm.403801 NR_038019 Gm20110 - predicted gene, 20110 ncRNA common_peak2_77_590_-0.107458559383314_9.15328504048587_0.621577302808556-2 chr11 35833389 35835067 + 0.621577302808556 NA intron (NM_025936, intron 1 of 14) intron (NM_025936, intron 1 of 14) 300 NM_025936 104458 Mm.284906 NM_025936 ENSMUSG00000018848 Rars 2610011N19Rik|2610037E21Rik|AL033339|AW985894 arginyl-tRNA synthetase protein-coding common_peak1_102_725_0.0877221457809885_9.54768681088624_0.621509014252575 chr6 129224540 129226139 + 0.621509014252575 NA Intergenic B3A|SINE|B2 12706 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak2_59_433_-0.126282488660419_8.69840998811427_0.621227434170945 chr2 119034227 119035589 + 0.621227434170945 NA exon (NM_173450, exon 1 of 3) exon (NM_173450, exon 1 of 3) 118 NM_173450 271842 Mm.33617 NM_173450 ENSMUSG00000027324 Rpusd2 4921503C21Rik|9630001E10|BB231107 RNA pseudouridylate synthase domain containing 2 protein-coding common_peak2_59_433_-0.126282488660419_8.69840998811427_0.621227434170945-2 chr6 91515159 91516640 + 0.621227434170945 NA promoter-TSS (NM_009531) promoter-TSS (NM_009531) -11 NM_009531 22591 Mm.2806 NM_009531 ENSMUSG00000030094 Xpc - xeroderma pigmentosum, complementation group C protein-coding common_peak2_32_168_0.176440511378695_7.48909969197153_0.621223873677679 chr13 23710133 23710995 + 0.621223873677679 NA intron (NM_010424, intron 1 of 5) intron (NM_010424, intron 1 of 5) 247 NM_010424 15216 Mm.2681 NM_010424 ENSMUSG00000006611 Hfe MR2 hemochromatosis protein-coding common_peak2_204_1723_0.0580047928546481_10.7805464555164_0.621032808504565 chr7 141171856 141173954 + 0.621032808504565 NA promoter-TSS (NM_001172100) promoter-TSS (NM_001172100) -54 NM_001172100 107702 Mm.197493 NM_145135 ENSMUSG00000038650 Rnh1 AW546468|C80305|RNH ribonuclease/angiogenin inhibitor 1 protein-coding common_peak1_74_563_-0.109401644109127_9.08485053034423_0.621024641068747 chr14 20024741 20025663 + 0.621024641068747 NA Intergenic RLTR42-int|LTR|ERVK -47953 NM_001285909 14702 Mm.41737 NM_010315 ENSMUSG00000043004 Gng2 - guanine nucleotide binding protein (G protein), gamma 2 protein-coding common_peak1_74_563_-0.109401644109127_9.08485053034423_0.621024641068747-2 chr3 69043973 69045203 + 0.621024641068747 NA intron (NM_025863, intron 1 of 2) CpG 154 NM_025863 66949 Mm.176695 NM_025863 ENSMUSG00000034317 Trim59 2310035M22Rik|2700022F13Rik|Mrf1|TSBF1 tripartite motif-containing 59 protein-coding common_peak1_38_261_-0.16047955192959_7.95318322557265_0.620987426483021 chr10 13008439 13009146 + 0.620987426483021 NA exon (NM_175102, exon 1 of 1) exon (NM_175102, exon 1 of 1) 342 NM_175102 66125 Mm.29743 NM_175102 ENSMUSG00000078348 Sf3b5 10kDa|1110005L13Rik|AU043053|Sf3b10 splicing factor 3b, subunit 5 protein-coding common_peak1_252_2241_0.0512716544159364_11.1562063900134_0.620963521543927 chr2 29619183 29621479 + 0.620963521543927 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 611 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak2_15_95_-0.288709237595988_6.44060788192316_0.62096275440975 chr10 81410306 81411118 + 0.62096275440975 NA intron (NM_026756, intron 2 of 8) intron (NM_026756, intron 2 of 8) 5585 NR_106141 102465778 NR_106141 ENSMUSG00000105379 Mir1191b mmu-mir-1191b microRNA 1191b ncRNA unique_peak2_15_95_-0.288709237595988_6.44060788192316_0.62096275440975-3 chr8 13608240 13609005 + 0.62096275440975 NA intron (NM_009025, intron 3 of 23) intron (NM_009025, intron 3 of 23) -46161 NM_001080781 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak1_15_95_-0.288709237595988_6.44060788192316_0.62096275440975-3 chr3 84337381 84337822 + 0.62096275440975 NA Intergenic Intergenic -32826 NM_001271726 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding common_peak1_15_95_-0.288709237595988_6.44060788192316_0.62096275440975-4 chr4 84007434 84007881 + 0.62096275440975 NA Intergenic MTEa|LTR|ERVL-MaLR 37222 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak1_15_95_-0.288709237595988_6.44060788192316_0.62096275440975-2 chr2 103642887 103643275 + 0.62096275440975 NA intron (NM_178890, intron 1 of 16) ID_B1|SINE|B4 76771 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak1_15_95_-0.288709237595988_6.44060788192316_0.62096275440975 chr16 64835758 64836099 + 0.62096275440975 NA Intergenic Intergenic -16157 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding unique_peak2_15_95_-0.288709237595988_6.44060788192316_0.62096275440975-2 chr17 32528336 32528994 + 0.62096275440975 NA intron (NM_001101445, intron 12 of 12) intron (NM_001101445, intron 12 of 12) -7964 NM_024442 70101 Mm.30504 NM_024442 ENSMUSG00000048440 Cyp4f16 2310021J05Rik|AI746515 cytochrome P450, family 4, subfamily f, polypeptide 16 protein-coding common_peak1_11_43_0.327731538268442_5.62329738777152_0.62090566497527 chr15 99457051 99457402 + 0.62090566497527 NA intron (NM_001001884, intron 1 of 12) CpG 522 NM_001001884 380969 Mm.22915 NM_001001884 ENSMUSG00000023009 Nckap5l C230021P08Rik|Cep169 NCK-associated protein 5-like protein-coding common_peak1_71_536_-0.110868293740033_9.0133441311154_0.62083586257928 chr11 94548226 94549609 + 0.62083586257928 NA intron (NM_001013381, intron 1 of 8) CpG 290 NM_001013381 237926 Mm.342275 NM_001013381 ENSMUSG00000039096 Rsad1 B430319G23|BC056485 radical S-adenosyl methionine domain containing 1 protein-coding common_peak1_71_536_-0.110868293740033_9.0133441311154_0.62083586257928-2 chr17 5975327 5976577 + 0.62083586257928 NA intron (NM_001113351, intron 1 of 24) intron (NM_001113351, intron 1 of 24) 366 NM_011523 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding common_peak1_71_536_-0.110868293740033_9.0133441311154_0.62083586257928-3 chr17 88700229 88701007 + 0.62083586257928 NA intron (NM_023630, intron 6 of 8) MTD|LTR|ERVL-MaLR 31958 NM_023630 71828 Mm.61330 NM_023630 ENSMUSG00000024154 Gtf2a1l 1700011N16Rik|Alf|Gtf2a1lf general transcription factor IIA, 1-like protein-coding common_peak2_71_536_-0.110868293740033_9.0133441311154_0.62083586257928 chr2 130667004 130668464 + 0.62083586257928 NA promoter-TSS (NM_025922) promoter-TSS (NM_025922) -107 NM_025922 16434 Mm.21399 NM_025922 ENSMUSG00000074797 Itpa 2010016I08Rik|AU020102|Itp inosine triphosphatase (nucleoside triphosphate pyrophosphatase) protein-coding common_peak1_71_536_-0.110868293740033_9.0133441311154_0.62083586257928-4 chr2 29654216 29655592 + 0.62083586257928 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 35184 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_82_551_0.10098141239018_9.15901516297326_0.620455045090055 chr6 47680824 47682043 + 0.620455045090055 NA promoter-TSS (NR_002841).6 promoter-TSS (NR_002841).6 -375 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_65_484_-0.117908678227254_8.86288659796086_0.620420841071802 chr9 109073613 109074732 + 0.620420841071802 NA promoter-TSS (NM_172774) promoter-TSS (NM_172774) -48 NM_172774 235610 Mm.100622 NM_172774 ENSMUSG00000025646 Atrip 6620401K05Rik ATR interacting protein protein-coding common_peak2_68_510_-0.114584160690827_8.93988740059221_0.620417896145645 chr7 45521047 45522634 + 0.620417896145645 NA intron (NM_001290998, intron 8 of 9) intron (NM_001290998, intron 8 of 9) 4428 NM_008654 17872 Mm.4048 NM_008654 ENSMUSG00000040435 Ppp1r15a 9630030H21|Gadd34|Myd116 protein phosphatase 1, regulatory (inhibitor) subunit 15A protein-coding common_peak2_31_208_-0.184493557769358_7.6151123531962_0.620303129934616 chrX 75734593 75736198 + 0.620303129934616 NA intron (NR_029443, intron 7 of 8) intron (NR_029443, intron 7 of 8) 29304 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA common_peak1_43_301_-0.151994685444771_8.16240739660269_0.619876194859641 chr17 78244735 78245565 + 0.619876194859641 NA intron (NM_015800, intron 2 of 16) intron (NM_015800, intron 2 of 16) 44902 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding unique_peak2_43_301_-0.151994685444771_8.16240739660269_0.619876194859641 chr17 11549913 11551654 + 0.619876194859641 NA intron (NM_016694, intron 6 of 11) intron (NM_016694, intron 6 of 11) 332406 NR_045808 52027 Mm.442257 NR_045808 D17Ertd648e - DNA segment, Chr 17, ERATO Doi 648, expressed ncRNA common_peak1_99_698_0.0900911691336592_9.49419422994227_0.619727307347746 chr12 111157142 111158876 + 0.619727307347746 NA Intergenic Intergenic -8361 NM_001286122 22031 Mm.27431 NM_011632 ENSMUSG00000021277 Traf3 AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn TNF receptor-associated factor 3 protein-coding common_peak2_55_333_0.12947276873023_8.44844067683917_0.619707262374124 chr2 58906500 58908035 + 0.619707262374124 NA intron (NM_001001178, intron 10 of 13) intron (NM_001001178, intron 10 of 13) 111339 NM_001001178 227933 Mm.330234 NM_177650 ENSMUSG00000036641 Ccdc148 5830402J09 coiled-coil domain containing 148 protein-coding common_peak2_94_745_-0.0945620299800254_9.49575080526522_0.619285748814425 chr12 51347441 51349157 + 0.619285748814425 NA promoter-TSS (NM_001167963) promoter-TSS (NM_001167963) 69 NM_001015099 217558 Mm.253264 NM_001015099 ENSMUSG00000035293 G2e3 6030408C04Rik|9030416F18|AW046379|D930034K21Rik|mKIAA1333 G2/M-phase specific E3 ubiquitin ligase protein-coding common_peak1_79_526_0.102699698366274_9.09300900082035_0.619265639519242 chr5 105145396 105146292 + 0.619265639519242 NA Intergenic Intergenic -6258 NM_001256005 17472 Mm.440525 NM_008620 ENSMUSG00000079363 Gbp4 AW228052|Mag-2|Mpa-2|Mpa2 guanylate binding protein 4 protein-coding common_peak1_338_3228_0.0427822887117042_11.6782628699698_0.619241747602425 chr1 166408781 166411177 + 0.619241747602425 NA promoter-TSS (NM_001142948) promoter-TSS (NM_001142948) -151 NM_001142948 71592 Mm.192094 NM_175170 ENSMUSG00000040596 Pogk 9130401E23Rik|BASS2|mKIAA1513 pogo transposable element with KRAB domain protein-coding common_peak1_187_1546_0.0610982283496959_10.6258065956239_0.618804157020146 chr7 28865324 28867428 + 0.618804157020146 NA TTS (NM_008496) TTS (NM_008496) 1990 NM_008496 16858 Mm.20973 NM_008496 ENSMUSG00000053522 Lgals7 Galectin-7|Pig1 lectin, galactose binding, soluble 7 protein-coding common_peak2_121_898_0.0789544567188809_9.85165453387389_0.618802532551805 chr7 141193134 141195154 + 0.618802532551805 NA promoter-TSS (NM_153777) promoter-TSS (NM_153777) 14 NM_001172064 70552 Mm.45104 NM_153777 ENSMUSG00000038637 Lrrc56 5730427C23Rik|BB110509|mFLJ00101 leucine rich repeat containing 56 protein-coding common_peak1_51_366_-0.137602697015925_8.45083490433525_0.618796119887785 chr10 62553142 62554294 + 0.618796119887785 NA Intergenic Intergenic 24739 NM_028197 72320 Mm.258955 NM_028197 ENSMUSG00000036955 Kif1bp 0710007C18Rik|2510003E04Rik|KBP|mKIAA1279 KIF1 binding protein protein-coding common_peak1_185_1662_-0.0621434212133227_10.6685007426806_0.618669152649123 chr7 4811572 4812886 + 0.618669152649123 NA 5' UTR (NM_133777, exon 1 of 4) 5' UTR (NM_133777, exon 1 of 4) 111 NM_133777 77891 Mm.389787 NM_133777 ENSMUSG00000060860 Ube2s 0910001J09Rik|6720465F12Rik|AA409170|E2-EPF ubiquitin-conjugating enzyme E2S protein-coding common_peak1_127_1062_-0.0778356848468693_10.0150080391077_0.618549468197577 chr8 94666447 94667264 + 0.618549468197577 NA promoter-TSS (NM_024269) promoter-TSS (NM_024269) -236 NM_024269 107566 Mm.393247 NM_024191 ENSMUSG00000031776 Arl2bp 1700010P10Rik|1700027H16Rik|6330544B05Rik|AI482273|AI849834|BART|Bart1 ADP-ribosylation factor-like 2 binding protein protein-coding common_peak1_89_611_0.0954031060583365_9.30508939572182_0.618486600398371 chr17 84859425 84860767 + 0.618486600398371 NA Intergenic Intergenic -69310 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak2_81_625_-0.101963270680836_9.2390372115922_0.618186405888188 chr16 90726320 90728032 + 0.618186405888188 NA exon (NM_025642, exon 1 of 5) exon (NM_025642, exon 1 of 5) 195 NM_025642 66578 Mm.180363 NM_025642 ENSMUSG00000022978 Mis18a 2610039C10Rik|2810018N07Rik MIS18 kinetochore protein A protein-coding common_peak2_208_1912_-0.0578755418213692_10.8726833874354_0.618143456152986 chr11 87447113 87449935 + 0.618143456152986 NA intron (NM_031386, intron 2 of 30) CpG 20933 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_131_1102_-0.0766725055577915_10.0688808228125_0.618092802854077 chr14 60720924 60723126 + 0.618092802854077 NA intron (NM_001033272, intron 4 of 12) intron (NM_001033272, intron 4 of 12) -10879 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding unique_peak2_30_155_0.181279985872058_7.37604221179828_0.617826128800723 chr17 33092226 33093273 + 0.617826128800723 NA intron (NM_001024950, intron 1 of 3) intron (NM_001024950, intron 1 of 3) 3382 NM_001024950 240068 Mm.121392 NM_001024950 ENSMUSG00000067424 Zfp563 D10628|D130054H01|NTfin7|Zfp413 zinc finger protein 563 protein-coding common_peak1_30_155_0.181279985872058_7.37604221179828_0.617826128800723 chr9 107340003 107340811 + 0.617826128800723 NA promoter-TSS (NM_175486) promoter-TSS (NM_175486) -233 NM_175486 235599 Mm.71039 NM_175486 ENSMUSG00000037977 6430571L13Rik - RIKEN cDNA 6430571L13 gene protein-coding unique_peak2_30_155_0.181279985872058_7.37604221179828_0.617826128800723-2 chrX 93631722 93632710 + 0.617826128800723 NA promoter-TSS (NM_008892) promoter-TSS (NM_008892) -61 NM_008892 18968 Mm.1923 NM_008892 ENSMUSG00000006678 Pola1 AW321876|Pola polymerase (DNA directed), alpha 1 protein-coding common_peak1_54_390_-0.129733778921437_8.54615790784663_0.617697092942498 chr9 108507242 108508000 + 0.617697092942498 NA promoter-TSS (NM_133794) promoter-TSS (NM_133794) -384 NM_133794 97541 Mm.272427 NM_133794 ENSMUSG00000032604 Qars 1110018N24Rik|1200016L19Rik|C80286|GLNRS glutaminyl-tRNA synthetase protein-coding common_peak1_29_193_-0.191256409589425_7.50428463739242_0.617690806387306 chr5 20947554 20948160 + 0.617690806387306 NA intron (NM_001080977, intron 1 of 7) B1_Mus2|SINE|Alu -3132 NR_030699 320770 Mm.491217 NR_030699 ENSMUSG00000101013 A630072M18Rik Aptr RIKEN cDNA A630072M18 gene ncRNA common_peak1_29_193_-0.191256409589425_7.50428463739242_0.617690806387306-2 chr6 129616289 129616968 + 0.617690806387306 NA intron (NM_001286018, intron 4 of 7) RSINE1|SINE|B4 6055 NM_033078 27007 Mm.8217 NM_033078 ENSMUSG00000030149 Klrk1 D6H12S2489E|NKG2-D|Nkg2d killer cell lectin-like receptor subfamily K, member 1 protein-coding common_peak2_29_193_-0.191256409589425_7.50428463739242_0.617690806387306 chr4 44981280 44982090 + 0.617690806387306 NA intron (NM_080289, intron 1 of 8) intron (NM_080289, intron 1 of 8) 291 NM_001312880 76238 Mm.196574 NM_080289 ENSMUSG00000035637 Grhpr 1110059D05Rik|6430629L09Rik|Glxr glyoxylate reductase/hydroxypyruvate reductase protein-coding common_peak1_129_973_0.0757488694369108_9.9656523968008_0.617669151175003 chr11 97765760 97767319 + 0.617669151175003 NA promoter-TSS (NM_026186) promoter-TSS (NM_026186) 74 NM_026186 67480 Mm.33206 NM_026186 ENSMUSG00000018541 Cwc25 1300013D05Rik|AA473636|Ccdc49|R75228 CWC25 spliceosome-associated protein protein-coding common_peak1_129_973_0.0757488694369108_9.9656523968008_0.617669151175003-2 chr2 45112052 45113530 + 0.617669151175003 NA intron (NR_110571, intron 1 of 2) intron (NR_110571, intron 1 of 2) 488 NM_015753 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak2_91_717_-0.0961546073568282_9.43976273014464_0.617660749368741 chr16 91727897 91729721 + 0.617660749368741 NA promoter-TSS (NM_133679) promoter-TSS (NM_133679) -7 NM_133679 66609 Mm.109823 NM_026994 ENSMUSG00000058240 Cryzl1 2210407J23Rik|2410006O11Rik|QOH-1 crystallin, zeta (quinone reductase)-like 1 protein-coding unique_peak2_37_202_0.16164059739807_7.74615621588421_0.617565999322302 chr11 116306080 116307320 + 0.617565999322302 NA promoter-TSS (NM_001162872) promoter-TSS (NM_001162872) 38 NM_016857 53413 Mm.22530 NM_016857 ENSMUSG00000020792 Exoc7 Exo70|sec70 exocyst complex component 7 protein-coding common_peak1_61_380_0.119647328427341_8.63347085170699_0.617275564190602 chr11 59398084 59399358 + 0.617275564190602 NA Intergenic Tigger7|DNA|TcMar-Tigger -23068 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak2_61_380_0.119647328427341_8.63347085170699_0.617275564190602 chr12 78748081 78749708 + 0.617275564190602 NA promoter-TSS (NM_019579) promoter-TSS (NM_019579) -53 NM_019579 56217 Mm.425777 NM_019579 ENSMUSG00000021112 Mpp5 3830420B02Rik|AI255216|AI644496|Pals1 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) protein-coding common_peak1_42_237_0.150909406946007_7.97027246678095_0.617151861858576 chr15 83100171 83100843 + 0.617151861858576 NA intron (NM_023475, intron 1 of 11) intron (NM_023475, intron 1 of 11) 302 NM_023475 68607 Mm.30056 NM_023475 ENSMUSG00000058586 Serhl 0610008B10Rik|1110019M09Rik|AU019786 serine hydrolase-like protein-coding common_peak1_42_237_0.150909406946007_7.97027246678095_0.617151861858576-2 chr6 99784842 99785952 + 0.617151861858576 NA Intergenic Intergenic -59005 NM_001170419 50501 Mm.87365 NM_015768 ENSMUSG00000030069 Prok2 Bv8|PK2|Prok1 prokineticin 2 protein-coding common_peak2_78_598_-0.104313101675469_9.17425564195105_0.617134940870594 chr17 29509673 29511950 + 0.617134940870594 NA Intergenic Intergenic 19766 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak2_444_4761_-0.0362279496278273_12.1992379304564_0.617096476975448 chr10 127665213 127670604 + 0.617096476975448 NA intron (NR_045171, intron 1 of 1) intron (NR_045171, intron 1 of 1) 785 NR_045171 72243 Mm.482902 NR_045171 ENSMUSG00000040195 1700012D01Rik - RIKEN cDNA 1700012D01 gene ncRNA common_peak1_17_108_-0.263498962904259_6.6364348433248_0.616769221074732 chr12 25361284 25361661 + 0.616769221074732 NA Intergenic Intergenic 232298 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak2_16_70_0.25378914146949_6.27664169023943_0.61673759389873-2 chrX 50622761 50623440 + 0.61673759389873 NA intron (NR_015505, intron 3 of 19) intron (NR_015505, intron 3 of 19) 12221 NR_015505 103012 Mm.482523 NR_015505 ENSMUSG00000085396 Firre 5830467J12Rik|6720401G13Rik|AW048145 functional intergenic repeating RNA element ncRNA common_peak1_16_70_0.25378914146949_6.27664169023943_0.61673759389873-3 chr14 27187542 27187902 + 0.61673759389873 NA intron (NM_001289686, intron 2 of 12) Lx8|LINE|L1 43729 NM_001289686 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_16_70_0.25378914146949_6.27664169023943_0.61673759389873 chr4 126057886 126058568 + 0.61673759389873 NA promoter-TSS (NM_172701) promoter-TSS (NM_172701) -338 NM_172701 230751 Mm.38907 NM_172701 ENSMUSG00000042616 Oscp1 1810007P19Rik|5730415O04|6030436A01Rik organic solute carrier partner 1 protein-coding common_peak1_16_70_0.25378914146949_6.27664169023943_0.61673759389873-4 chr2 102875941 102876384 + 0.61673759389873 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 25503 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_16_70_0.25378914146949_6.27664169023943_0.61673759389873-5 chr9 32722332 32722792 + 0.61673759389873 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 26520 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_16_70_0.25378914146949_6.27664169023943_0.61673759389873-2 chr11 83604422 83604905 + 0.61673759389873 NA intron (NR_036453, intron 2 of 8) MLT1G|LTR|ERVL-MaLR -11576 NM_009139 20305 Mm.137 NM_009139 ENSMUSG00000018927 Ccl6 MRP-1|Scya6|c10 chemokine (C-C motif) ligand 6 protein-coding common_peak1_16_70_0.25378914146949_6.27664169023943_0.61673759389873 chr1 54906652 54907069 + 0.61673759389873 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 19527 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_211_1797_0.0567890823013766_10.8405718466651_0.616616058033103 chr8 79639340 79640748 + 0.616616058033103 NA exon (NM_001081164, exon 1 of 21) exon (NM_001081164, exon 1 of 21) 368 NM_001081164 73945 Mm.34348 NM_001081164 ENSMUSG00000036990 Otud4 4930431L18Rik|AI449692|D8Ertd69e|mKIAA1046 OTU domain containing 4 protein-coding unique_peak2_57_415_-0.125164092442168_8.63785767192001_0.616480492937499 chr11 109431648 109433859 + 0.616480492937499 NA intron (NM_001252193, intron 5 of 7) intron (NM_001252193, intron 5 of 7) 6533 NM_001252193 13929 Mm.211850 NM_025275 ENSMUSG00000020610 Amz2 AA408420|ESTM12|X83328 archaelysin family metallopeptidase 2 protein-coding common_peak2_75_571_-0.106282511008786_9.106730081274_0.616376563636181 chr2 158687315 158690285 + 0.616376563636181 NA intron (NM_001159662, intron 1 of 10) intron (NM_001159662, intron 1 of 10) 21665 NM_001159662 228852 Mm.150540 NM_153089 ENSMUSG00000037754 Ppp1r16b ANKRD4|C130078N17Rik|TIMAP|Wdt4 protein phosphatase 1, regulatory (inhibitor) subunit 16B protein-coding common_peak1_75_571_-0.106282511008786_9.106730081274_0.616376563636181 chr19 29371329 29372518 + 0.616376563636181 NA intron (NM_021893, intron 1 of 6) intron (NM_021893, intron 1 of 6) 4485 NM_021893 60533 Mm.245363 NM_021893 ENSMUSG00000016496 Cd274 A530045L16Rik|B7h1|Pdcd1l1|Pdcd1lg1|Pdl1 CD274 antigen protein-coding common_peak1_46_325_-0.14559706680506_8.27592962082855_0.616366850107029-3 chr7 28790517 28791461 + 0.616366850107029 NA intron (NM_177158, intron 3 of 11) (TG)n|Simple_repeat|Simple_repeat 2020 NM_177158 320435 Mm.74632 NM_177158 ENSMUSG00000051735 Rinl 5830482F20Rik|9930116N10Rik Ras and Rab interactor-like protein-coding common_peak1_46_325_-0.14559706680506_8.27592962082855_0.616366850107029-2 chr10 96273161 96274122 + 0.616366850107029 NA Intergenic MLT1J1|LTR|ERVL-MaLR 47434 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_46_325_-0.14559706680506_8.27592962082855_0.616366850107029 chr4 11190262 11192121 + 0.616366850107029 NA promoter-TSS (NM_001282943) promoter-TSS (NM_001282943) -160 NM_001037134 12448 Mm.35867 NM_009830 ENSMUSG00000028212 Ccne2 - cyclin E2 protein-coding common_peak1_46_325_-0.14559706680506_8.27592962082855_0.616366850107029 chr10 39434060 39435047 + 0.616366850107029 NA intron (NM_001122892, intron 2 of 12) (ATTG)n|Simple_repeat|Simple_repeat 64754 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_240_2110_0.0521406319074931_11.0697811793009_0.61628754744168 chr12 8673265 8675340 + 0.61628754744168 NA promoter-TSS (NM_001160220) promoter-TSS (NM_001160220) 43 NM_001160220 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding unique_peak2_36_246_-0.168583580373268_7.86407544139804_0.616196925855723 chr16 3814177 3815967 + 0.616196925855723 NA Intergenic RLTR50A|LTR|ERVK -23903 NM_008762 18312 Mm.377102 NM_008762 ENSMUSG00000059043 Olfr15 MOR256-17|OR3 olfactory receptor 15 protein-coding common_peak1_27_178_-0.197251027246331_7.38519026364109_0.615926386650228 chr18 80498918 80499456 + 0.615926386650228 NA Intergenic Intergenic -29520 NM_026295 67655 Mm.312893 NM_026295 ENSMUSG00000033323 Ctdp1 4930563P03Rik|AW553592 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding common_peak1_158_1253_0.0675546487943581_10.3260989571992_0.615825845200985 chr7 88277017 88279167 + 0.615825845200985 NA promoter-TSS (NM_009982) promoter-TSS (NM_009982) 7 NM_001311790 13032 Mm.89295 NM_009982 ENSMUSG00000030560 Ctsc AI047818|CatC|DPP1|DPPI cathepsin C protein-coding common_peak1_148_1273_-0.0702245601486791_10.280037282182_0.615513494792978 chr11 52395601 52397025 + 0.615513494792978 NA promoter-TSS (NM_153117) promoter-TSS (NM_153117) -115 NM_153117 213673 Mm.291979 NM_153117 ENSMUSG00000036275 9530068E07Rik C85061|Kct2 RIKEN cDNA 9530068E07 gene protein-coding unique_peak2_19_121_-0.23960310993211_6.81093578259683_0.615456870466516-2 chr2 168169717 168170797 + 0.615456870466516 NA Intergenic Intergenic -15744 NR_040327 77017 Mm.407822 NR_040327 ENSMUSG00000087648 E130018N17Rik - RIKEN cDNA E130018N17 gene ncRNA unique_peak2_19_121_-0.23960310993211_6.81093578259683_0.615456870466516 chr14 51883815 51884552 + 0.615456870466516 NA promoter-TSS (NM_001029990) promoter-TSS (NM_001029990) -659 NM_001029990 52535 Mm.5750 NM_001029990 ENSMUSG00000004561 Mettl17 2310032K15Rik|D14Ertd209e|Mett11d1 methyltransferase like 17 protein-coding common_peak1_19_121_-0.23960310993211_6.81093578259683_0.615456870466516-2 chr6 3384077 3384526 + 0.615456870466516 NA intron (NM_010156, intron 1 of 1) intron (NM_010156, intron 1 of 1) 15270 NM_010156 209086 Mm.196013 NM_010156 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like protein-coding unique_peak2_19_121_-0.23960310993211_6.81093578259683_0.615456870466516-3 chr4 134601554 134602197 + 0.615456870466516 NA intron (NM_207237, intron 2 of 11) RMER15|LTR|ERVL -34024 NR_105829 102465216 NR_105829 ENSMUSG00000099289 Mir6403 Gm27992|mmu-mir-6403 microRNA 6403 ncRNA common_peak1_19_121_-0.23960310993211_6.81093578259683_0.615456870466516 chr4 32259289 32259739 + 0.615456870466516 NA Intergenic Intergenic -157921 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_19_121_-0.23960310993211_6.81093578259683_0.615456870466516 chr12 99467520 99468238 + 0.615456870466516 NA Intergenic Intergenic -17805 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak2_50_296_0.13335165632669_8.28099494896411_0.615352116565134 chr11 114906605 114907827 + 0.615352116565134 NA Intergenic GA-rich|Low_complexity|Low_complexity 17175 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding common_peak2_69_518_-0.111532702647992_8.96382437703389_0.615294951833201 chr15 73067713 73068953 + 0.615294951833201 NA Intergenic Intergenic -7129 NM_001164643 76510 Mm.158902 NM_029640 ENSMUSG00000047921 Trappc9 1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882 trafficking protein particle complex 9 protein-coding common_peak2_154_1214_0.068047193119483_10.2807641950529_0.615260645506352 chr2 178505169 178507549 + 0.615260645506352 NA Intergenic Intergenic 75844 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak1_28_142_0.188791977734179_7.25426732564548_0.615252092647737 chr4 138304674 138305372 + 0.615252092647737 NA exon (NM_007838, exon 1 of 11) exon (NM_007838, exon 1 of 11) 285 NM_007838 13200 Mm.7236 NM_007838 ENSMUSG00000028757 Ddost - dolichyl-di-phosphooligosaccharide-protein glycotransferase protein-coding common_peak2_28_142_0.188791977734179_7.25426732564548_0.615252092647737 chr13 113395992 113397227 + 0.615252092647737 NA Intergenic Intergenic 106235 NR_045501 70917 Mm.491036 NR_045501 4921509O07Rik - RIKEN cDNA 4921509O07 gene ncRNA unique_peak2_28_142_0.188791977734179_7.25426732564548_0.615252092647737 chr2 132509088 132510332 + 0.615252092647737 NA intron (NR_028286, intron 1 of 3) intron (NR_028286, intron 1 of 3) 18982 NR_028286 70371 Mm.394667 NR_028286 ENSMUSG00000086379 1700026D11Rik - RIKEN cDNA 1700026D11 gene ncRNA common_peak1_60_441_-0.123383108344459_8.7262110052192_0.615175360604527 chr13 30609373 30610532 + 0.615175360604527 NA Intergenic Intergenic -5091 NR_045975 75090 Mm.292232 NR_045975 ENSMUSG00000086263 4930519D14Rik - RIKEN cDNA 4930519D14 gene ncRNA common_peak1_60_441_-0.123383108344459_8.7262110052192_0.615175360604527-2 chr14 45317839 45318974 + 0.615175360604527 NA exon (NM_015774, exon 1 of 16) exon (NM_015774, exon 1 of 16) 166 NM_015774 50527 Mm.387108 NM_015774 ENSMUSG00000021831 Ero1l ERO1-L|Ero1a ERO1-like (S. cerevisiae) protein-coding common_peak2_136_1152_-0.0748392411169121_10.1337571770933_0.615042933163758 chr16 3883794 3885703 + 0.615042933163758 NA 5' UTR (NM_029090, exon 1 of 7) 5' UTR (NM_029090, exon 1 of 7) 129 NM_001290689 74763 Mm.28403 NM_029090 ENSMUSG00000005982 Naa60 1200013P24Rik|AI315146|Nat15 N(alpha)-acetyltransferase 60, NatF catalytic subunit protein-coding common_peak1_113_925_-0.0837573525237048_9.81298970699838_0.615024242592081 chr6 91683582 91684737 + 0.615024242592081 NA promoter-TSS (NM_009320) promoter-TSS (NM_009320) 92 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak2_196_1780_-0.0593651844763183_10.7687892088635_0.614791762406565 chr13 104285002 104289422 + 0.614791762406565 NA promoter-TSS (NM_001081020) promoter-TSS (NM_001081020) -661 NM_001081020 108154 Mm.208125 NM_175496 ENSMUSG00000046169 Adamts6 A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 protein-coding common_peak2_138_1058_0.0734979068002648_10.0852358273925_0.614588565449678 chr9 22084637 22086196 + 0.614588565449678 NA promoter-TSS (NM_012029) promoter-TSS (NM_012029) 11 NM_001253897 26940 Mm.425568 NM_012029 ENSMUSG00000066839 Ecsit Sitpec ECSIT signalling integrator protein-coding unique_peak2_12_75_-0.319118579989008_6.08836822344908_0.614532557650123 chr1 170232656 170233243 + 0.614532557650123 NA promoter-TSS (NM_001033499) promoter-TSS (NM_001033499) 78 NM_001033499 545378 Mm.379942 NM_001033499 ENSMUSG00000073494 Sh2d1b2 EAT-2B|Eat2b|Ert|Sh2d1c SH2 domain containing 1B2 protein-coding unique_peak2_12_75_-0.319118579989008_6.08836822344908_0.614532557650123-2 chr10 118714392 118715108 + 0.614532557650123 NA Intergenic Intergenic 154153 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_12_75_-0.319118579989008_6.08836822344908_0.614532557650123 chr13 115098614 115099011 + 0.614532557650123 NA intron (NM_001033228, intron 1 of 28) intron (NM_001033228, intron 1 of 28) 3152 NM_001033228 109700 Mm.317280 NM_001033228 ENSMUSG00000042284 Itga1 CD49A|E130012M19Rik|Vla1 integrin alpha 1 protein-coding unique_peak2_12_75_-0.319118579989008_6.08836822344908_0.614532557650123-3 chr19 46572597 46573217 + 0.614532557650123 NA promoter-TSS (NM_053196) promoter-TSS (NM_053196) 178 NM_019718 56350 Mm.22085 NM_019718 ENSMUSG00000025035 Arl3 - ADP-ribosylation factor-like 3 protein-coding common_peak1_12_75_-0.319118579989008_6.08836822344908_0.614532557650123-2 chr18 47332024 47332326 + 0.614532557650123 NA intron (NM_018744, intron 1 of 18) intron (NM_018744, intron 1 of 18) 36693 NM_018744 20358 Mm.40909 NM_018744 ENSMUSG00000019647 Sema6a A730020P05Rik|AI851735|Sema6A-1|Semaq|VIa sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A protein-coding unique_peak2_12_75_-0.319118579989008_6.08836822344908_0.614532557650123-4 chr4 57305669 57306228 + 0.614532557650123 NA Intergenic Intergenic -4111 NM_011207 545622 Mm.246552 NM_011207 ENSMUSG00000038764 Ptpn3 9530011I20Rik|PTP-H1|PTPCL protein tyrosine phosphatase, non-receptor type 3 protein-coding unique_peak2_9_56_-0.368368097720322_5.64870596530458_0.614476839801569 chr2 32601255 32601646 + 0.614476839801569 NA intron (NM_001025311, intron 1 of 4) intron (NM_001025311, intron 1 of 4) 1741 NM_001025311 50935 Mm.88831 NM_016973 ENSMUSG00000026811 St6galnac6 ST6GalNAcVI|Siat7f ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 protein-coding common_peak2_174_1544_-0.0638398213898821_10.5614712120968_0.614057325610051 chr2 167061647 167063929 + 0.614057325610051 NA promoter-TSS (NM_001081005) promoter-TSS (NM_001081005) -146 NM_001081005 68949 Mm.391959 NM_001081005 Zfas1 1500012F01Rik|Zfos1 zinc finger, NFX1-type containing 1, antisense RNA 1 ncRNA common_peak2_49_349_-0.138583608509588_8.38191930757753_0.614004045004989 chr8 119594239 119596327 + 0.614004045004989 NA intron (NM_026648, intron 9 of 11) intron (NM_026648, intron 9 of 11) 9957 NM_021441 21341 Mm.41977 NM_021441 ENSMUSG00000031832 Taf1c Tafi95|mTAFI95 TATA-box binding protein associated factor, RNA polymerase I, C protein-coding unique_peak2_18_81_0.242812198778807_6.47895810400749_0.613753565865924-2 chr9 50682266 50683112 + 0.613753565865924 NA intron (NM_001311069, intron 14 of 19) intron (NM_001311069, intron 14 of 19) -22909 NM_145614 235339 Mm.285076 NM_145614 ENSMUSG00000000168 Dlat 6332404G05Rik|DLTA|PDC-E2 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) protein-coding common_peak1_18_81_0.242812198778807_6.47895810400749_0.613753565865924 chr10 76270469 76270847 + 0.613753565865924 NA intron (NM_001081419, intron 32 of 37) intron (NM_001081419, intron 32 of 37) 16822 NM_009115 20203 Mm.235998 NM_009115 ENSMUSG00000033208 S100b AI850290|Bpb S100 protein, beta polypeptide, neural protein-coding unique_peak2_18_81_0.242812198778807_6.47895810400749_0.613753565865924 chr8 46786471 46787176 + 0.613753565865924 NA intron (NM_008391, intron 1 of 8) B3A|SINE|B2 47078 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_18_81_0.242812198778807_6.47895810400749_0.613753565865924-2 chr19 46001919 46002372 + 0.613753565865924 NA Intergenic B2_Mm1a|SINE|B2 -1333 NM_176785 20170 Mm.101110 NM_176785 ENSMUSG00000074811 Hps6 5330434M19Rik|BLOC2|ru Hermansky-Pudlak syndrome 6 protein-coding common_peak1_18_81_0.242812198778807_6.47895810400749_0.613753565865924-3 chr5 93149253 93149739 + 0.613753565865924 NA intron (NM_001310669, intron 3 of 10) intron (NM_001310669, intron 3 of 10) 56080 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_18_81_0.242812198778807_6.47895810400749_0.613753565865924 chr14 57724938 57725633 + 0.613753565865924 NA intron (NM_153382, intron 1 of 1) intron (NM_153382, intron 1 of 1) 9133 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_26_129_0.19983975381114_7.12228768993402_0.613742147057493 chr1 87878161 87878712 + 0.613742147057493 NA intron (NM_177646, intron 1 of 29) intron (NM_177646, intron 1 of 29) 25149 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak1_26_129_0.19983975381114_7.12228768993402_0.613742147057493-4 chr2 156882044 156882682 + 0.613742147057493 NA intron (NM_029983, intron 2 of 7) intron (NM_029983, intron 2 of 7) 4715 NM_029983 77799 Mm.29264 NM_029983 ENSMUSG00000027636 Sla2 A930009E21Rik|AI430952|SLAP-2|SLAP2 Src-like-adaptor 2 protein-coding common_peak2_26_129_0.19983975381114_7.12228768993402_0.613742147057493 chr2 144593835 144594560 + 0.613742147057493 NA exon (NM_001033297, exon 1 of 2) exon (NM_001033297, exon 1 of 2) 132 NM_001033297 228715 Mm.27391 NM_001033297 ENSMUSG00000074754 Gm561 - predicted gene 561 protein-coding common_peak1_23_149_-0.215043222403786_7.12129707929399_0.613742147057493 chr12 70078084 70078564 + 0.613742147057493 NA intron (NM_001286080, intron 4 of 29) intron (NM_001286080, intron 4 of 29) 24530 NM_001081453 18080 Mm.244047 NM_008697 ENSMUSG00000021068 Nin 3110068G20Rik|AI385615|AU024711|mKIAA1565 ninein protein-coding common_peak1_26_129_0.19983975381114_7.12228768993402_0.613742147057493-3 chr13 14630327 14630932 + 0.613742147057493 NA intron (NM_134067, intron 1 of 1) intron (NM_134067, intron 1 of 1) 371 NM_134067 105351 Mm.41450 NM_134067 ENSMUSG00000039182 AW209491 - expressed sequence AW209491 protein-coding common_peak1_26_129_0.19983975381114_7.12228768993402_0.613742147057493-2 chr1 171841654 171842210 + 0.613742147057493 NA intron (NM_001289470, intron 2 of 8) L1_Mur3|LINE|L1 2235 NM_013489 12523 Mm.259115 NM_013489 ENSMUSG00000038147 Cd84 A130013D22Rik|CDw84|SLAMF5 CD84 antigen protein-coding common_peak1_23_149_-0.215043222403786_7.12129707929399_0.613742147057493-2 chr15 97421817 97422326 + 0.613742147057493 NA Intergenic Intergenic -174784 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak2_275_2672_-0.0484241796235736_11.3600320324313_0.613691684773371 chr5 92503895 92506729 + 0.613691684773371 NA 5' UTR (NM_007644, exon 1 of 12) 5' UTR (NM_007644, exon 1 of 12) 345 NM_007644 12492 Mm.297964 NM_007644 ENSMUSG00000029426 Scarb2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85 scavenger receptor class B, member 2 protein-coding common_peak1_194_1619_0.0592709387141923_10.6914135671291_0.6136737934519 chr6 113306668 113307897 + 0.6136737934519 NA 5' UTR (NM_030178, exon 1 of 13) 5' UTR (NM_030178, exon 1 of 13) 145 NM_001282126 78783 Mm.356059 NM_030178 ENSMUSG00000001632 Brpf1 4833438B11Rik|4930540D11Rik|Brpf2 bromodomain and PHD finger containing, 1 protein-coding common_peak1_21_135_-0.227665098556388_6.97363029197215_0.613640312731052-2 chr14 56275758 56276205 + 0.613640312731052 NA Intergenic Intergenic -13721 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak1_21_135_-0.227665098556388_6.97363029197215_0.613640312731052-3 chr8 125734186 125734634 + 0.613640312731052 NA intron (NM_025636, intron 1 of 4) CpG 207 NM_001310688 66566 Mm.25296 NM_025636 ENSMUSG00000031851 Ntpcr 2310079N02Rik|AI449709 nucleoside-triphosphatase, cancer-related protein-coding common_peak1_21_135_-0.227665098556388_6.97363029197215_0.613640312731052 chr11 98543071 98543480 + 0.613640312731052 NA intron (NM_011771, intron 1 of 7) intron (NM_011771, intron 1 of 7) 2756 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding common_peak1_192_1737_-0.0604070743681415_10.7330088296303_0.613631783430652 chr17 57278462 57280616 + 0.613631783430652 NA intron (NM_001163815, intron 2 of 27) intron (NM_001163815, intron 2 of 27) 439 NM_001163815 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding common_peak1_208_1766_0.0566592919731264_10.8154159705382_0.613395752779443 chr17 27203157 27204512 + 0.613395752779443 NA exon (NM_146075, exon 1 of 9) exon (NM_146075, exon 1 of 9) 604 NM_146075 224640 Mm.29689 NM_146075 ENSMUSG00000044857 Lemd2 BC026588|Lem2|NET25 LEM domain containing 2 protein-coding common_peak1_25_164_-0.210900969604884_7.26087172944337_0.613201830336324-3 chr11 87109589 87110251 + 0.613201830336324 NA intron (NM_025377, intron 1 of 3) CpG 659 NM_025377 66140 Mm.45008 NM_025377 ENSMUSG00000020492 Ska2 1110001A07Rik|C78640|Fam33a spindle and kinetochore associated complex subunit 2 protein-coding unique_peak2_25_164_-0.210900969604884_7.26087172944337_0.613201830336324 chr17 78999555 79000672 + 0.613201830336324 NA intron (NM_029239, intron 2 of 18) intron (NM_029239, intron 2 of 18) 8392 NM_001171005 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding common_peak1_25_164_-0.210900969604884_7.26087172944337_0.613201830336324 chr1 120264828 120265338 + 0.613201830336324 NA intron (NM_001085409, intron 2 of 5) intron (NM_001085409, intron 2 of 5) 197 NM_133186 68428 Mm.181033 NM_133186 ENSMUSG00000026389 Steap3 1010001D01Rik|Tsap6|pHyde STEAP family member 3 protein-coding common_peak1_25_164_-0.210900969604884_7.26087172944337_0.613201830336324-2 chr1 128832210 128832800 + 0.613201830336324 NA Intergenic Intergenic -240206 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak1_25_164_-0.210900969604884_7.26087172944337_0.613201830336324-4 chr5 21419196 21419783 + 0.613201830336324 NA intron (NM_029195, intron 1 of 18) B3|SINE|B2 5188 NM_029195 75172 Mm.426695 NM_029195 ENSMUSG00000064280 Ccdc146 4930528G09Rik|mKIAA1505 coiled-coil domain containing 146 protein-coding common_peak1_34_230_-0.170303326892523_7.76659737796979_0.613195134704596 chr1 86189560 86190182 + 0.613195134704596 NA intron (NM_001310702, intron 11 of 24) intron (NM_001310702, intron 11 of 24) 35091 NM_001310702 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding unique_peak2_34_230_-0.170303326892523_7.76659737796979_0.613195134704596 chr2 130472241 130473793 + 0.613195134704596 NA intron (NM_008980, intron 1 of 21) intron (NM_008980, intron 1 of 21) 22739 NM_001163688 19262 Mm.224246 NM_008980 ENSMUSG00000027303 Ptpra Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha protein tyrosine phosphatase, receptor type, A protein-coding common_peak2_52_373_-0.131152694444525_8.48131811266537_0.612561192640377 chr17 83694810 83696726 + 0.612561192640377 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -10395 NM_001171054 116871 Mm.277668 NM_054082 ENSMUSG00000055817 Mta3 1110002J22Rik|mKIAA1266 metastasis associated 3 protein-coding common_peak1_56_341_0.126646204664276_8.48117561721804_0.612561192640377 chr11 52045950 52047150 + 0.612561192640377 NA intron (NM_001166654, intron 13 of 13) intron (NM_001166654, intron 13 of 13) 42329 NM_001166653 213084 Mm.280557 NM_153785 ENSMUSG00000020389 Cdkl3 AI852479|B230379H01Rik cyclin-dependent kinase-like 3 protein-coding common_peak2_87_594_0.0962765068713569_9.26488411163098_0.612511463122152 chr1 135728382 135729891 + 0.612511463122152 NA promoter-TSS (NM_007791) promoter-TSS (NM_007791) -61 NM_007791 13007 Mm.196484 NM_007791 ENSMUSG00000026421 Csrp1 AA408841|AA959891|AW545626|CRP1|Csrp cysteine and glycine-rich protein 1 protein-coding common_peak2_421_4240_0.0370228827288841_12.0687002089609_0.612465870527235 chr19 53405887 53415197 + 0.612465870527235 NA Intergenic Intergenic -19969 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak2_141_1202_-0.0726490701427025_10.1960963921047_0.612435686845921 chr11 70699587 70701418 + 0.612435686845921 NA promoter-TSS (NM_001252484) promoter-TSS (NM_001252484) -46 NM_153103 16562 Mm.99996 NM_153103 ENSMUSG00000020821 Kif1c B430105J22Rik|D11Bwg1349e|Ltxs1|Orch3 kinesin family member 1C protein-coding common_peak2_216_1999_-0.0555659706623111_10.9380012993309_0.612405893660932 chr7 81827967 81830241 + 0.612405893660932 NA exon (NM_146193, exon 1 of 8) exon (NM_146193, exon 1 of 8) 327 NM_146193 83962 Mm.439893 NM_146193 ENSMUSG00000025103 Btbd1 1190005H08Rik BTB (POZ) domain containing 1 protein-coding common_peak2_137_1162_-0.0744277500400674_10.1464215064532_0.612272051553337-2 chr15 80233168 80234951 + 0.612272051553337 NA promoter-TSS (NM_178719) promoter-TSS (NM_178719) -21 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak2_137_1162_-0.0744277500400674_10.1464215064532_0.612272051553337 chr1 164959096 164961678 + 0.612272051553337 NA Intergenic Intergenic -24877 NM_008510 16963 Mm.190 NM_008510 ENSMUSG00000026573 Xcl1 AI661682|ATAC|LTN|Lptn|SCM-1|SCM-1a|Scyc1 chemokine (C motif) ligand 1 protein-coding common_peak2_44_308_-0.145284390339743_8.1988208327345_0.6122654135414 chr12 11229910 11231525 + 0.6122654135414 NA Intergenic Intergenic -21769 NM_019544 56184 Mm.117113 NM_019544 ENSMUSG00000047002 Msgn1 Msgn|pMsgn1 mesogenin 1 protein-coding common_peak1_223_1926_0.0542608272812721_10.9392712699364_0.612088690924786 chr4 46422863 46424364 + 0.612088690924786 NA Intergenic Intergenic -19430 NM_053149 93966 Mm.25793 NM_053149 ENSMUSG00000028332 Hemgn 4921524M03Rik|AI317176|EDAG|Hgn|mNDR hemogen protein-coding common_peak2_89_698_-0.0963576966244482_9.40096979706321_0.612029477609626 chr12 25365718 25368425 + 0.612029477609626 NA Intergenic PB1|SINE|Alu 237897 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_143_1107_0.0707801293825465_10.1491322307405_0.611723733636198 chr17 12758135 12760356 + 0.611723733636198 NA intron (NM_010515, intron 1 of 47) (CA)n|Simple_repeat|Simple_repeat 10461 NM_010515 16004 Mm.26553 NM_010515 ENSMUSG00000023830 Igf2r AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300 insulin-like growth factor 2 receptor protein-coding common_peak1_258_2309_0.0496426241734618_11.1984984483902_0.611704917080066 chr3 51415461 51417108 + 0.611704917080066 NA 5' UTR (NM_053089, exon 1 of 20) 5' UTR (NM_053089, exon 1 of 20) 268 NM_053089 74838 Mm.275281 NM_053089 ENSMUSG00000063273 Naa15 5730450D16Rik|6330400I15|ASTBDN|Narg1|Tbdn-1|mNAT1 N(alpha)-acetyltransferase 15, NatA auxiliary subunit protein-coding common_peak2_226_2111_-0.0544493723707227_11.0171694331731_0.611654857045437 chr5 31240248 31242458 + 0.611654857045437 NA intron (NM_147201, intron 1 of 17) GC_rich|Low_complexity|Low_complexity 435 NM_147201 192292 Mm.292040 NM_147201 ENSMUSG00000029148 Nrbp1 B230344L17Rik|Nrbp nuclear receptor binding protein 1 protein-coding common_peak1_118_973_-0.0807055918426975_9.88742516616099_0.61108275586858 chr6 120822010 120823323 + 0.61108275586858 NA promoter-TSS (NM_007510) promoter-TSS (NM_007510) 19 NM_007510 11973 Mm.29045 NM_007510 ENSMUSG00000019210 Atp6v1e1 2410029D23Rik|Atp6e|Atp6e2|Atp6v1e|D6Ertd385e|E2|P31|Vma4 ATPase, H+ transporting, lysosomal V1 subunit E1 protein-coding common_peak1_59_365_0.119568905500017_8.57548429103405_0.611052439649012 chr11 51688095 51688679 + 0.611052439649012 NA intron (NM_025319, intron 1 of 1) intron (NM_025319, intron 1 of 1) 247 NM_025319 66050 Mm.35693 NM_025319 ENSMUSG00000007777 0610009B22Rik - RIKEN cDNA 0610009B22 gene protein-coding common_peak2_59_365_0.119568905500017_8.57548429103405_0.611052439649012 chr13 54524178 54526079 + 0.611052439649012 NA exon (NM_176987, exon 2 of 10) exon (NM_176987, exon 2 of 10) 21323 NM_176987 319719 Mm.376151 NM_176987 ENSMUSG00000043183 Simc1 4732471D19Rik SUMO-interacting motifs containing 1 protein-coding common_peak1_39_269_-0.159069058233699_7.99728106793398_0.610959699032192 chr5 73150917 73151632 + 0.610959699032192 NA intron (NM_028194, intron 3 of 62) MTD|LTR|ERVL-MaLR 105344 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_39_269_-0.159069058233699_7.99728106793398_0.610959699032192-2 chr9 107612199 107612809 + 0.610959699032192 NA Intergenic Intergenic -3263 NM_001291539 20347 Mm.4083 NM_009153 ENSMUSG00000057969 Sema3b SemA|Semaa|sema5|semaV sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B protein-coding common_peak1_116_852_0.0806760344428543_9.77673994853972_0.610574835688658 chr6 146079533 146081320 + 0.610574835688658 NA Intergenic Intergenic 146279 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan protein-coding common_peak1_20_93_0.22288579212086_6.66603174773807_0.610533001990685-3 chr11 106694848 106695263 + 0.610533001990685 NA intron (NM_001305158, intron 4 of 14) B3|SINE|B2 20226 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding unique_peak2_20_93_0.22288579212086_6.66603174773807_0.610533001990685-2 chr4 145046091 145046692 + 0.610533001990685 NA exon (NM_001276502, exon 63 of 69) exon (NM_001276502, exon 63 of 69) 144275 NM_001276502 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding common_peak1_20_93_0.22288579212086_6.66603174773807_0.610533001990685-8 chr8 91075552 91076024 + 0.610533001990685 NA intron (NM_001282000, intron 2 of 20) intron (NM_001282000, intron 2 of 20) 5731 NM_001282000 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 retinoblastoma-like 2 protein-coding common_peak1_20_93_0.22288579212086_6.66603174773807_0.610533001990685 chr10 39407569 39408045 + 0.610533001990685 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 38008 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_20_93_0.22288579212086_6.66603174773807_0.610533001990685-6 chr19 53163625 53164123 + 0.610533001990685 NA intron (NM_013758, intron 1 of 15) intron (NM_013758, intron 1 of 15) 19877 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak1_20_93_0.22288579212086_6.66603174773807_0.610533001990685-2 chr10 108089189 108089598 + 0.610533001990685 NA Intergenic Intergenic -73007 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak1_20_93_0.22288579212086_6.66603174773807_0.610533001990685-7 chr4 155208253 155208709 + 0.610533001990685 NA intron (NM_011385, intron 1 of 6) intron (NM_011385, intron 1 of 6) 14054 NM_011385 20481 Mm.28520 NM_011385 ENSMUSG00000029050 Ski 2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088 ski sarcoma viral oncogene homolog (avian) protein-coding common_peak1_20_93_0.22288579212086_6.66603174773807_0.610533001990685-4 chr14 30869373 30869813 + 0.610533001990685 NA intron (NM_028839, intron 4 of 7) intron (NM_028839, intron 4 of 7) -9664 NM_181390 66175 Mm.220895 NM_181390 ENSMUSG00000042485 Mustn1 1110028G01Rik|Mustang musculoskeletal, embryonic nuclear protein 1 protein-coding unique_peak2_20_93_0.22288579212086_6.66603174773807_0.610533001990685 chr10 116921939 116922786 + 0.610533001990685 NA intron (NM_001003950, intron 3 of 9) intron (NM_001003950, intron 3 of 9) -25483 NM_001033333 237558 Mm.336386 NM_001033333 ENSMUSG00000034057 Myrfl Gm239 myelin regulatory factor-like protein-coding common_peak1_20_93_0.22288579212086_6.66603174773807_0.610533001990685-5 chr15 60128930 60129369 + 0.610533001990685 NA Intergenic Lx8|LINE|L1 -112531 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_105_752_0.0858480219575402_9.5994300656507_0.610347658391538 chrX 13041809 13042923 + 0.610347658391538 NA intron (NR_038158, intron 1 of 2) L1MDa|LINE|L1 351 NR_038158 70489 Mm.383563 NR_038158 ENSMUSG00000087424 5730405O15Rik - RIKEN cDNA 5730405O15 gene ncRNA common_peak1_48_281_0.137324884511891_8.20821379465474_0.61015721420695 chr14 70545088 70545853 + 0.61015721420695 NA 5' UTR (NM_180588, exon 1 of 8) 5' UTR (NM_180588, exon 1 of 8) 219 NM_180588 72549 Mm.46742 NM_180588 ENSMUSG00000033589 Reep4 2700029E10Rik receptor accessory protein 4 protein-coding common_peak1_455_4669_0.0351288185122183_12.2067712438531_0.610106216894459 chr9 21286844 21291390 + 0.610106216894459 NA exon (NM_009878, exon 2 of 2) exon (NM_009878, exon 2 of 2) -1148 NM_145416 215194 Mm.290690 NM_145416 ENSMUSG00000035047 Kri1 - KRI1 homolog protein-coding unique_peak2_22_105_0.210540349530311_6.83319062932835_0.609929000337591 chr12 73663155 73664146 + 0.609929000337591 NA intron (NM_001313977, intron 3 of 14) intron (NM_001313977, intron 3 of 14) 78854 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_22_105_0.210540349530311_6.83319062932835_0.609929000337591 chr14 47541950 47542429 + 0.609929000337591 NA 3' UTR (NM_172599, exon 10 of 10) 3' UTR (NM_172599, exon 10 of 10) 26245 NM_172599 100504663 Mm.287279 NM_172599 ENSMUSG00000037526 Atg14 4832427M01|Atg14L|D14Ertd114e|D14Ertd436e autophagy related 14 protein-coding unique_peak2_22_105_0.210540349530311_6.83319062932835_0.609929000337591-2 chr4 128618134 128618927 + 0.609929000337591 NA promoter-TSS (NM_205823) promoter-TSS (NM_205823) 89 NM_205823 384059 Mm.331901 NM_205823 ENSMUSG00000062545 Tlr12 Gm1365|Tlr11 toll-like receptor 12 protein-coding common_peak1_22_105_0.210540349530311_6.83319062932835_0.609929000337591-2 chr4 144900123 144900689 + 0.609929000337591 NA intron (NM_011303, intron 1 of 5) intron (NM_011303, intron 1 of 5) 7269 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak2_120_889_0.0789053187816879_9.83711418524461_0.60987263495608 chr4 136601554 136602953 + 0.60987263495608 NA exon (NM_133872, exon 1 of 19) exon (NM_133872, exon 1 of 19) 470 NM_133872 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding common_peak1_152_1195_0.0678036190826354_10.2579034837394_0.609712185245795 chr2 78868088 78870221 + 0.609712185245795 NA 5' UTR (NM_009454, exon 1 of 6) 5' UTR (NM_009454, exon 1 of 6) 107 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_152_1195_0.0678036190826354_10.2579034837394_0.609712185245795 chr18 84091290 84093086 + 0.609712185245795 NA intron (NM_146090, intron 1 of 1) CpG 4030 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding common_peak2_98_690_0.0889125634259056_9.47699818210121_0.609658961472375 chr5 142628850 142630437 + 0.609658961472375 NA promoter-TSS (NM_178398) promoter-TSS (NM_178398) 59 NM_178398 74781 Mm.29432 NM_178398 ENSMUSG00000029578 Wipi2 1110018O08Rik|2510001I10Rik WD repeat domain, phosphoinositide interacting 2 protein-coding common_peak2_111_905_-0.0835778676555972_9.78157830621844_0.609519284663975 chr3 142544857 142547631 + 0.609519284663975 NA intron (NM_145545, intron 10 of 10) intron (NM_145545, intron 10 of 10) -13808 NM_018734 55932 Mm.439718 NM_018734 ENSMUSG00000028268 Gbp3 AW228655|GBP-3|GBP-4|Gbp4 guanylate binding protein 3 protein-coding common_peak1_58_424_-0.125792625983239_8.66842271803344_0.609500821988336 chr1 54840551 54841593 + 0.609500821988336 NA intron (NM_001081433, intron 1 of 27) ID_B1|SINE|B4 85315 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_124_926_0.0776952503891728_9.89527315382012_0.609453921370485 chr3 54691940 54693684 + 0.609453921370485 NA promoter-TSS (NM_019995) promoter-TSS (NM_019995) -293 NM_019995 56790 Mm.486375 NM_019995 ENSMUSG00000027751 Supt20 AA667204|AI450544|D3Ertd300e|Fam48a|Supt20h|p38IP suppressor of Ty 20 protein-coding unique_peak2_47_332_-0.13899058779281_8.30988307317486_0.609398312408957 chr14 57909472 57911121 + 0.609398312408957 NA Intergenic Intergenic -20034 NM_029492 75965 Mm.29044 NM_029492 ENSMUSG00000021969 Zdhhc20 4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|ENSMUSG00000055956|HK11 zinc finger, DHHC domain containing 20 protein-coding common_peak1_47_332_-0.13899058779281_8.30988307317486_0.609398312408957 chr14 27375393 27376088 + 0.609398312408957 NA intron (NM_001289688, intron 2 of 9) B1_Mus1|SINE|Alu 14351 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_47_332_-0.13899058779281_8.30988307317486_0.609398312408957 chr2 157137359 157139151 + 0.609398312408957 NA Intergenic ID_B1|SINE|B4 -3033 NM_018851 56045 Mm.248478 NM_018851 ENSMUSG00000027639 Samhd1 E330031J07Rik|Mg11 SAM domain and HD domain, 1 protein-coding common_peak1_61_449_-0.120486675296375_8.75353785356885_0.609347885998224 chr1 120099091 120100321 + 0.609347885998224 NA Intergenic Intergenic 21213 NM_001037999 13167 Mm.2785 NM_007830 ENSMUSG00000026385 Dbi ACBD1|Acbp|EP|endozepine diazepam binding inhibitor protein-coding common_peak1_61_449_-0.120486675296375_8.75353785356885_0.609347885998224-2 chrX 36874241 36875403 + 0.609347885998224 NA intron (NM_019668, intron 2 of 5) CpG-15640 527 NM_019668 22209 Mm.395649 NM_019668 ENSMUSG00000016308 Ube2a HHR6A|HR6A|Mhr6a ubiquitin-conjugating enzyme E2A protein-coding common_peak2_61_449_-0.120486675296375_8.75353785356885_0.609347885998224 chr5 53266584 53267935 + 0.609347885998224 NA exon (NM_001145433, exon 1 of 3) exon (NM_001145433, exon 1 of 3) 153 NM_001145433 66278 Mm.27900 NM_001145433 ENSMUSG00000061461 Smim20 1110067B18Rik|1810013D10Rik|N28078 small integral membrane protein 20 protein-coding unique_peak2_32_215_-0.177567554502589_7.66610372491217_0.609280629070596 chr5 34634293 34635583 + 0.609280629070596 NA exon (NM_026660, exon 8 of 13) exon (NM_026660, exon 8 of 13) 2176 NM_026660 68294 Mm.34564 NM_026660 ENSMUSG00000001082 Mfsd10 0610009O03Rik|Tetran major facilitator superfamily domain containing 10 protein-coding common_peak1_33_175_0.17071695352323_7.54479009539891_0.609190305573151 chr19 5211599 5212223 + 0.609190305573151 NA intron (NM_153129, intron 1 of 23) intron (NM_153129, intron 1 of 23) 61208 NM_153129 107975 Mm.234923 NM_153129 ENSMUSG00000024855 Pacs1 AI325977 phosphofurin acidic cluster sorting protein 1 protein-coding common_peak2_64_475_-0.117903242975046_8.83586614182042_0.609012089924036 chr18 12228486 12230742 + 0.609012089924036 NA intron (NM_008720, intron 1 of 24) intron (NM_008720, intron 1 of 24) 6772 NM_008720 18145 Mm.3484 NM_008720 ENSMUSG00000024413 Npc1 A430089E03Rik|C85354|D18Ertd139e|D18Ertd723e|lcsd|nmf164|spm Niemann-Pick type C1 protein-coding common_peak2_90_707_-0.0952605073629496_9.41997529640152_0.607941937812639 chr11 5877234 5879175 + 0.607941937812639 NA promoter-TSS (NM_008894) promoter-TSS (NM_008894) 52 NM_008894 18972 Mm.35788 NM_008894 ENSMUSG00000020471 Pold2 50kDa|p50|po1D2 polymerase (DNA directed), delta 2, regulatory subunit protein-coding common_peak2_195_1769_-0.0594327856869636_10.7598172521269_0.607862101290125 chr16 87494943 87498256 + 0.607862101290125 NA promoter-TSS (NM_009840) promoter-TSS (NM_009840) 526 NR_040375 414095 Mm.166361 NR_040375 ENSMUSG00000093606 B130034C11Rik - RIKEN cDNA B130034C11 gene ncRNA common_peak2_97_772_-0.0908360558278076_9.54890657601094_0.60780956931902 chr7 41392564 41394080 + 0.60780956931902 NA promoter-TSS (NM_183167) promoter-TSS (NM_183167) 57 NM_001199330 233168 Mm.379390 NM_183167 ENSMUSG00000056383 AI987944 - expressed sequence AI987944 protein-coding common_peak2_51_304_0.12936812337704_8.31734949413877_0.607463537306121 chr7 140206889 140208897 + 0.607463537306121 NA Intergenic Intergenic -5125 NM_001011814 258055 Mm.377339 NM_001011814 ENSMUSG00000050366 Olfr524 MOR103-14P olfactory receptor 524 protein-coding unique_peak2_51_304_0.12936812337704_8.31734949413877_0.607463537306121 chr11 109368211 109370051 + 0.607463537306121 NA intron (NM_010303, intron 2 of 3) intron (NM_010303, intron 2 of 3) -5477 NR_038097 100036768 Mm.467767 NR_038097 ENSMUSG00000056687 Gm11696 OTTMUSG00000003456 predicted gene 11696 ncRNA common_peak1_43_245_0.143895548541067_8.01446227960977_0.607359540986581 chr11 106702847 106703568 + 0.607359540986581 NA intron (NM_001305158, intron 2 of 14) ORR1B2|LTR|ERVL-MaLR 12074 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak1_43_245_0.143895548541067_8.01446227960977_0.607359540986581-2 chr15 100604558 100605127 + 0.607359540986581 NA Intergenic Intergenic -4858 NM_001304965 19009 Mm.28825 NM_010127 ENSMUSG00000009739 Pou6f1 2310038G18Rik|C79593|Emb|cns-1 POU domain, class 6, transcription factor 1 protein-coding common_peak2_75_493_0.105221594184925_9.00097802867714_0.607311854347505 chr2 121007631 121009322 + 0.607311854347505 NA promoter-TSS (NM_010761) promoter-TSS (NM_010761) 68 NM_010761 17151 Mm.7838 NM_010761 ENSMUSG00000023572 Ccndbp1 AU022347|DIP1|GCIP|Maid|SECC-8|SSEC-8 cyclin D-type binding-protein 1 protein-coding common_peak2_307_3049_-0.0446473641918317_11.5522698452417_0.607058322362752 chr18 38418075 38420757 + 0.607058322362752 NA intron (NM_022996, intron 1 of 7) intron (NM_022996, intron 1 of 7) 441 NM_022996 65113 Mm.102496 NM_022996 ENSMUSG00000024425 Ndfip1 0610010M22Rik|N4wbp5 Nedd4 family interacting protein 1 protein-coding common_peak1_37_253_-0.161708172188919_7.90783060067771_0.606995414413875 chr2 30392592 30393322 + 0.606995414413875 NA intron (NM_001290509, intron 1 of 6) intron (NM_001290509, intron 1 of 6) 703 NM_001290508 57170 Mm.285167 NM_020329 ENSMUSG00000026856 Dolpp1 0610011H20Rik|AB030189|LSFR2 dolichyl pyrophosphate phosphatase 1 protein-coding common_peak2_241_2122_0.0512904999164263_11.0775339058636_0.606720772758609 chr2 30656816 30659768 + 0.606720772758609 NA Intergenic CpG -62918 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak2_50_357_-0.1361450001368_8.41574327719586_0.606667193877342 chr5 38884465 38886110 + 0.606667193877342 NA Intergenic ORR1B1-int|LTR|ERVL-MaLR -8594 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak1_87_679_-0.0963685710710394_9.36120665060218_0.606411616754674 chr1 161776050 161777814 + 0.606411616754674 NA Intergenic Intergenic 11563 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_30_200_-0.184369486444622_7.55886694795662_0.60591661223689 chr15 102225245 102225876 + 0.60591661223689 NA intron (NM_013566, intron 2 of 14) intron (NM_013566, intron 2 of 14) 6375 NM_013566 16421 Mm.58 NM_013566 ENSMUSG00000001281 Itgb7 Ly69 integrin beta 7 protein-coding common_peak2_30_200_-0.184369486444622_7.55886694795662_0.60591661223689 chr17 80223988 80225016 + 0.60591661223689 NA promoter-TSS (NM_026053) promoter-TSS (NM_026053) 13 NM_026053 67242 Mm.279985 NM_026053 ENSMUSG00000055760 Gemin6 2610019B15Rik|2810470M17Rik gem (nuclear organelle) associated protein 6 protein-coding common_peak2_198_1662_0.0574093405601488_10.7282771235673_0.6057483227021 chr7 39654278 39656670 + 0.6057483227021 NA Intergenic IAPLTR2_Mm|LTR|ERVK 137708 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak1_53_381_-0.128608950009797_8.51312435303085_0.605728683601979 chr11 70969396 70970011 + 0.605728683601979 NA promoter-TSS (NM_001252413) promoter-TSS (NM_001252413) 270 NM_172394 19069 Mm.288962 NM_172394 ENSMUSG00000040667 Nup88 Nup84|Prei2 nucleoporin 88 protein-coding common_peak1_386_3809_0.0384209201798313_11.9147857424706_0.605191555662036 chr11 52097382 52099830 + 0.605191555662036 NA promoter-TSS (NM_019411) promoter-TSS (NM_019411) -218 NM_019411 19052 Mm.260288 NM_019411 ENSMUSG00000020349 Ppp2ca PP2A|R75353 protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform protein-coding common_peak1_235_2211_-0.0523846428201686_11.0849433488246_0.605172448212157 chr15 58888911 58890423 + 0.605172448212157 NA TTS (NM_175151) TTS (NM_175151) 438 NM_175226 75841 Mm.4537 NM_175226 ENSMUSG00000037075 Rnf139 4930555P18Rik ring finger protein 139 protein-coding common_peak2_63_396_0.116482688354923_8.69123654132042_0.60501685320172 chr3 89458371 89459900 + 0.60501685320172 NA promoter-TSS (NM_026784) promoter-TSS (NM_026784) 17 NM_026784 68603 Mm.34242 NM_026784 ENSMUSG00000027952 Pmvk 1110011E12Rik|2900002L22Rik|AV001327|PMK|PMKA|PMKASE phosphomevalonate kinase protein-coding unique_peak2_31_162_0.174137420080447_7.4357968642713_0.604990102761636 chr2 29738821 29740047 + 0.604990102761636 NA 3' UTR (NM_001039086, exon 26 of 26) 3' UTR (NM_001039086, exon 26 of 26) -22094 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding unique_peak2_14_88_-0.29368930955505_6.32888877618887_0.604937194445238-2 chr12 77113694 77114472 + 0.604937194445238 NA Intergenic ORR1D1|LTR|ERVL-MaLR -124021 NM_001252614 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding common_peak2_14_88_-0.29368930955505_6.32888877618887_0.604937194445238 chr6 120866641 120867285 + 0.604937194445238 NA intron (NM_153516, intron 4 of 6) B3A|SINE|B2 30733 NM_153516 94044 Mm.27990 NM_153516 ENSMUSG00000009112 Bcl2l13 BCL-RAMBO|E430016C20Rik|Mil-1|Mil1 BCL2-like 13 (apoptosis facilitator) protein-coding common_peak1_14_88_-0.29368930955505_6.32888877618887_0.604937194445238 chr2 75660609 75660962 + 0.604937194445238 NA intron (NM_146130, intron 1 of 10) PB1D10|SINE|Alu 1495 NR_033513 627828 Mm.459502 NR_033513 ENSMUSG00000092086 Gm6793 EG627828 heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo unique_peak2_14_88_-0.29368930955505_6.32888877618887_0.604937194445238 chr1 173411424 173412147 + 0.604937194445238 NA Intergenic Intergenic -8819 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_14_88_-0.29368930955505_6.32888877618887_0.604937194445238-2 chr9 108147677 108148101 + 0.604937194445238 NA intron (NM_007567, intron 1 of 11) intron (NM_007567, intron 1 of 11) 11034 NR_126077 76873 Mm.436935 NR_126077 ENSMUSG00000102224 4930447F24Rik - RIKEN cDNA 4930447F24 gene ncRNA unique_peak2_14_88_-0.29368930955505_6.32888877618887_0.604937194445238-3 chr8 105758363 105759138 + 0.604937194445238 NA promoter-TSS (NM_027469) promoter-TSS (NM_027469) -143 NM_027469 70575 Mm.40954 NM_027469 ENSMUSG00000013150 Gfod2 5730466C23Rik glucose-fructose oxidoreductase domain containing 2 protein-coding common_peak1_71_535_-0.108179206212393_9.01199958735157_0.604936498205214 chr8 107587720 107588666 + 0.604936498205214 NA intron (NM_010817, intron 1 of 6) CpG 289 NM_010817 17463 Mm.18347 NM_010817 ENSMUSG00000039067 Psmd7 AW107203|Mov-34|Mov34 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 protein-coding common_peak1_13_54_0.27859272530691_5.92065607617812_0.604904474110885-2 chr5 77093746 77094009 + 0.604904474110885 NA intron (NM_175606, intron 2 of 2) intron (NM_175606, intron 2 of 2) 1390 NM_001159901 74318 Mm.181852 NM_175606 ENSMUSG00000059325 Hopx 1110018K11Rik|1200015P04Rik|2300002F06Rik|AI848177|AW490897|Cameo|Hdop|Hod|Hop|Ob1|Obl|Toto HOP homeobox protein-coding common_peak1_13_54_0.27859272530691_5.92065607617812_0.604904474110885 chr18 65208216 65208664 + 0.604904474110885 NA exon (NM_001114386, exon 28 of 31) exon (NM_001114386, exon 28 of 31) -40421 NR_029600 387231 NR_029600 ENSMUSG00000065402 Mir122 Mir122a|Mirn122a|mir-122|mmu-mir-122 microRNA 122 ncRNA common_peak1_56_406_-0.124386264716074_8.60669185190821_0.604680987958967 chr1 64527164 64528318 + 0.604680987958967 NA Intergenic Intergenic -5063 NM_133828 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding common_peak2_128_1071_-0.0762275040505394_10.0279754384325_0.604321163896142 chrX 167145373 167148085 + 0.604321163896142 NA Intergenic Intergenic 62489 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak2_393_3895_0.0379409657293124_11.946748444947_0.604274949726587 chr9 59484322 59487918 + 0.604274949726587 NA exon (NM_019927, exon 1 of 14) exon (NM_019927, exon 1 of 14) 254 NM_019927 23806 Mm.305925 NM_019927 ENSMUSG00000025234 Arih1 AU021774|Ari|Ari1|Hari|Hhari|Ubch7bp|Uip77 ariadne RBR E3 ubiquitin protein ligase 1 protein-coding common_peak1_103_735_0.0850839109566319_9.56610391153533_0.604165942525402 chr3 38483945 38484878 + 0.604165942525402 NA intron (NM_001167883, intron 1 of 3) CpG 405 NM_001167883 99696 Mm.290937 NM_001033198 ENSMUSG00000044864 Ankrd50 AI662170|E430012K20Rik|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 protein-coding common_peak2_68_509_-0.111758116612064_8.93847437855283_0.604134066999146 chr1 191717070 191719073 + 0.604134066999146 NA promoter-TSS (NM_001134829) promoter-TSS (NM_001134829) 47 NM_172266 226856 Mm.277958 NM_172266 ENSMUSG00000026623 Lpgat1 AI649174|AW112037|BC013667 lysophosphatidylglycerol acyltransferase 1 protein-coding common_peak1_62_457_-0.117594628145161_8.78040647402436_0.603732732206003 chr11 50325810 50326592 + 0.603732732206003 NA promoter-TSS (NM_007597) promoter-TSS (NM_007597) -528 NM_001110500 12330 Mm.248827 NM_007597 ENSMUSG00000020368 Canx 1110069N15Rik|AI988026|Cnx|D11Ertd153e calnexin protein-coding common_peak1_352_3397_0.0407970734757424_11.7508686739221_0.603634810719681 chr8 69933651 69937706 + 0.603634810719681 NA intron (NM_001286450, intron 3 of 12) intron (NM_001286450, intron 3 of 12) -33120 NM_023312 67184 Mm.21162 NM_023312 ENSMUSG00000036199 Ndufa13 2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 protein-coding common_peak1_301_2798_0.0444369245989922_11.4729142338724_0.603597024952051 chr4 83322823 83324912 + 0.603597024952051 NA intron (NM_027238, intron 1 of 19) CpG 322 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_59_432_-0.122954470942664_8.69674597925539_0.603551033997031 chr7 55968122 55969039 + 0.603551033997031 NA intron (NR_015495, intron 1 of 5) ORR1E-int|LTR|ERVL-MaLR 6049 NR_015495 320845 Mm.274484 NM_001033396 A230056P14Rik OTTMUSG00000027345 RIKEN cDNA A230056P14 gene ncRNA common_peak1_35_237_-0.16352009024892_7.81305771818348_0.603451459589394-2 chr17 30841698 30842546 + 0.603451459589394 NA intron (NM_013811, intron 88 of 92) intron (NM_013811, intron 88 of 92) -59745 NM_021332 14652 Mm.390969 NM_021332 ENSMUSG00000024027 Glp1r GLP-1R|GLP1Rc glucagon-like peptide 1 receptor protein-coding common_peak1_35_237_-0.16352009024892_7.81305771818348_0.603451459589394 chr11 29514329 29515023 + 0.603451459589394 NA intron (NM_001163454, intron 1 of 2) intron (NM_001163454, intron 1 of 2) 357 NM_026465 67939 Mm.251087 NM_026465 ENSMUSG00000032673 Prorsd1 2010316F05Rik|Ncrna00117|Prdxdd1 prolyl-tRNA synthetase domain containing 1 protein-coding common_peak1_79_527_0.0999647306450342_9.09437648468097_0.603272514944141 chr12 73597317 73598444 + 0.603272514944141 NA intron (NM_001313977, intron 2 of 14) intron (NM_001313977, intron 2 of 14) 13084 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_28_185_-0.190495496595463_7.4439110628103_0.603240865721959 chr3 146784047 146784688 + 0.603240865721959 NA intron (NM_011100, intron 1 of 9) PB1D10|SINE|Alu -2951 NM_001164200 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak2_102_819_-0.0879322157287064_9.63551399164109_0.602568680318351 chr11 100702592 100704756 + 0.602568680318351 NA exon (NM_030150, exon 3 of 13) exon (NM_030150, exon 3 of 13) 597 NM_030150 80861 Mm.271830 NM_030150 ENSMUSG00000017830 Dhx58 B430001I08Rik|D11Lgp2e|LPG2|Lgp2|RLR-3 DEXH (Asp-Glu-X-His) box polypeptide 58 protein-coding common_peak1_88_688_-0.0953418039401033_9.38068927073424_0.602286492856192-2 chr13 8885272 8886303 + 0.602286492856192 NA 5' UTR (NM_145360, exon 1 of 5) 5' UTR (NM_145360, exon 1 of 5) 181 NM_145360 319554 Mm.29847 NM_145360 ENSMUSG00000058258 Idi1 4832416K17Rik isopentenyl-diphosphate delta isomerase protein-coding common_peak1_88_688_-0.0953418039401033_9.38068927073424_0.602286492856192 chr1 153899783 153900865 + 0.602286492856192 NA TTS (NR_106194) TTS (NR_106194) 395 NM_008131 14645 Mm.210745 NM_008131 ENSMUSG00000026473 Glul GS|Glns glutamate-ammonia ligase (glutamine synthetase) protein-coding common_peak1_88_688_-0.0953418039401033_9.38068927073424_0.602286492856192-3 chr4 8926561 8927911 + 0.602286492856192 NA Intergenic Intergenic 236830 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_145_1242_-0.0706792434804981_10.2442709593122_0.602164753425814 chr4 83485719 83487022 + 0.602164753425814 NA promoter-TSS (NM_133948) promoter-TSS (NM_133948) 78 NM_001290527 101739 Mm.105331 NM_133948 ENSMUSG00000028484 Psip1 AA408851|AU015605|Dfs70|Ledgfa|Ledgfb|Psip2 PC4 and SFRS1 interacting protein 1 protein-coding common_peak2_78_597_-0.101902583084788_9.17305038265571_0.602161009950063 chr6 83348809 83350215 + 0.602161009950063 NA promoter-TSS (NM_175277) promoter-TSS (NM_175277) 28 NM_175277 78653 Mm.391470 NM_175277 ENSMUSG00000045160 Bola3 1810056O20Rik bolA-like 3 (E. coli) protein-coding common_peak2_111_807_0.0815778896388419_9.69900042757122_0.602099079769396 chr7 127991444 127994526 + 0.602099079769396 NA intron (NM_023258, intron 2 of 2) intron (NM_023258, intron 2 of 2) 882 NM_023258 66824 Mm.24163 NM_023258 ENSMUSG00000030793 Pycard 9130417A21Rik|Asc|CARD5|TMS-1|TNS1|masc PYD and CARD domain containing protein-coding common_peak1_100_708_0.0872063763659412_9.51324500542249_0.602051704216694 chr12 116047664 116048560 + 0.602051704216694 NA intron (NM_001286214, intron 1 of 2) intron (NM_001286214, intron 1 of 2) 388 NM_019565 56220 Mm.254997 NM_019565 ENSMUSG00000042063 Zfp386 Kzf1|mKIAA4205 zinc finger protein 386 (Kruppel-like) protein-coding common_peak2_76_502_0.10230695096754_9.0255680652893_0.602018628762089 chr17 28515214 28517092 + 0.602018628762089 NA Intergenic Intergenic -14708 NM_026290 67645 Mm.46170 NM_026290 ENSMUSG00000024223 Armc12 4930511I11Rik|AV041658 armadillo repeat containing 12 protein-coding common_peak1_76_502_0.10230695096754_9.0255680652893_0.602018628762089 chr5 72792429 72793931 + 0.602018628762089 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) -40403 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_86_586_0.0955811375558007_9.24500726188795_0.602014372380351 chr17 66122989 66124491 + 0.602014372380351 NA intron (NM_001003919, intron 1 of 26) CpG 220 NM_001003919 320209 Mm.259605 NM_001003919 ENSMUSG00000035842 Ddx11 4732462I11Rik|CHL1|CHLR1|KRG2|essa15a DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 protein-coding common_peak2_49_289_0.132718413307806_8.24626829666884_0.602002592711126 chr11 69011779 69012902 + 0.602002592711126 NA Intergenic RLTR34C_MM|LTR|ERVK -3571 NM_001281465 68964 Mm.285785 NM_001013256 ENSMUSG00000020898 Ctc1 1500010J02Rik|AAF-132|AAF132 CTS telomere maintenance complex component 1 protein-coding common_peak1_36_196_0.157731831755034_7.70091773533389_0.601862417909902 chr1 106615131 106615815 + 0.601862417909902 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -68842 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_189_1703_-0.0596275187642696_10.7048958608437_0.601856329607378 chr4 155991859 155994047 + 0.601856329607378 NA promoter-TSS (NM_080445) promoter-TSS (NM_080445) 48 NM_001302467 20318 Mm.293517 NM_011341 ENSMUSG00000029076 Sdf4 Cab45 stromal cell derived factor 4 protein-coding common_peak2_125_1041_-0.0769180911403691_9.98668051670832_0.601688440267882-2 chr8 72328171 72332039 + 0.601688440267882 NA Intergenic Intergenic 11043 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak2_125_1041_-0.0769180911403691_9.98668051670832_0.601688440267882 chr11 71018538 71020595 + 0.601688440267882 NA promoter-TSS (NM_025993) promoter-TSS (NM_025993) -45 NM_025993 67139 Mm.28227 NM_025993 ENSMUSG00000040599 Mis12 2510025F08Rik|AU044651|Misc12 MIS12 kinetochore complex component protein-coding common_peak1_26_170_-0.195644948046303_7.32003004086275_0.60144134496861 chr5 143180316 143180864 + 0.60144134496861 NA promoter-TSS (NM_177880) promoter-TSS (NM_177880) 185 NM_021326 57782 Mm.320419 NM_021326 ENSMUSG00000061898 Rbak - RB-associated KRAB zinc finger protein-coding unique_peak2_26_170_-0.195644948046303_7.32003004086275_0.60144134496861 chr7 112209248 112210684 + 0.60144134496861 NA Intergenic Intergenic -15870 NM_177282 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak1_26_170_-0.195644948046303_7.32003004086275_0.60144134496861-2 chr6 91515255 91515812 + 0.60144134496861 NA promoter-TSS (NM_026309) promoter-TSS (NM_026309) 355 NM_009531 22591 Mm.2806 NM_009531 ENSMUSG00000030094 Xpc - xeroderma pigmentosum, complementation group C protein-coding common_peak1_29_149_0.179837742101823_7.31873756154679_0.60144134496861 chr1 180356869 180357549 + 0.60144134496861 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -26660 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_26_170_-0.195644948046303_7.32003004086275_0.60144134496861-3 chr7 128181120 128181702 + 0.60144134496861 NA intron (NM_001029872, intron 5 of 30) MIR|SINE|MIR 7465 NM_001029872 381924 Mm.334257 NM_001029872 ENSMUSG00000070369 Itgad Cd11d integrin, alpha D protein-coding common_peak1_210_1788_0.0556616670870547_10.8327685055954_0.601196817101723 chr15 44619045 44620240 + 0.601196817101723 NA promoter-TSS (NM_019480) promoter-TSS (NM_019480) 1 NM_019480 55960 Mm.287896 NM_019480 ENSMUSG00000022339 Ebag9 AI835379|Rcas1 estrogen receptor-binding fragment-associated gene 9 protein-coding common_peak2_551_6179_-0.0309588689858753_12.5779116882988_0.601149189728182 chr13 24611741 24620289 + 0.601149189728182 NA intron (NM_178658, intron 1 of 13) intron (NM_178658, intron 1 of 13) 1409 NM_178658 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_75_570_-0.10375810959324_9.10546788056622_0.601075461388779 chr3 28262131 28263140 + 0.601075461388779 NA promoter-TSS (NM_001163009) promoter-TSS (NM_001163009) -579 NM_001163007 665113 Mm.126193 NM_026910 ENSMUSG00000027692 Tnik 1500031A17Rik|4831440I19Rik|AI451411|C530008O15Rik|C630040K21Rik TRAF2 and NCK interacting kinase protein-coding common_peak2_75_570_-0.10375810959324_9.10546788056622_0.601075461388779 chr15 66858800 66862718 + 0.601075461388779 NA Intergenic Intergenic -28930 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_73_477_0.105529154417018_8.95363138518926_0.601074069467713-2 chr7 126368953 126370531 + 0.601074069467713 NA promoter-TSS (NM_010689) promoter-TSS (NM_010689) -208 NM_010689 16797 Mm.10280 NM_010689 ENSMUSG00000030742 Lat p36-38|pp36 linker for activation of T cells protein-coding common_peak2_73_477_0.105529154417018_8.95363138518926_0.601074069467713 chr1 13266173 13268177 + 0.601074069467713 NA intron (NM_001302702, intron 2 of 21) G-rich|Low_complexity|Low_complexity 105254 NM_001302702 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding common_peak2_285_2787_-0.0462121880996396_11.4219087518186_0.600584641286094 chr18 35561314 35563786 + 0.600584641286094 NA intron (NM_010771, intron 1 of 14) CpG 392 NM_010771 17184 Mm.215034 NM_010771 ENSMUSG00000037236 Matr3 1110061A14Rik|2810017I02Rik|AI841759|AW555618|D030046F20Rik|mKIAA0723 matrin 3 protein-coding unique_peak2_16_101_-0.268889080997323_6.53798080147283_0.60026900239382 chr13 54789355 54790048 + 0.60026900239382 NA intron (NM_028841, intron 1 of 7) CpG 296 NM_028841 74257 Mm.32883 NM_028841 ENSMUSG00000025875 Tspan17 2210021G21Rik|AI047581|Fbxo23|Tm4sf17 tetraspanin 17 protein-coding common_peak1_16_101_-0.268889080997323_6.53798080147283_0.60026900239382 chr18 38185380 38185808 + 0.60026900239382 NA Intergenic Intergenic 24168 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak1_16_101_-0.268889080997323_6.53798080147283_0.60026900239382-2 chr9 103133670 103134066 + 0.60026900239382 NA intron (NM_173781, intron 1 of 7) intron (NM_173781, intron 1 of 7) 21794 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding unique_peak2_16_101_-0.268889080997323_6.53798080147283_0.60026900239382-2 chrX 101732459 101733289 + 0.60026900239382 NA exon (NM_009910, exon 2 of 2) exon (NM_009910, exon 2 of 2) 1273 NM_009910 12766 Mm.12876 NM_009910 ENSMUSG00000050232 Cxcr3 Cd183|Cmkar3 chemokine (C-X-C motif) receptor 3 protein-coding common_peak2_264_2542_-0.0484683943686726_11.2880815495058_0.60016937298134 chr6 143165990 143169582 + 0.60016937298134 NA intron (NM_029250, intron 1 of 7) CpG 556 NM_029250 75320 Mm.272548 NM_029250 ENSMUSG00000030275 Etnk1 1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1 ethanolamine kinase 1 protein-coding unique_peak2_11_68_-0.32136129987243_5.94784380684195_0.599944741495252 chr8 117050919 117051545 + 0.599944741495252 NA intron (NM_029686, intron 15 of 42) intron (NM_029686, intron 15 of 42) 31217 NM_029686 76645 Mm.159753 NM_029686 ENSMUSG00000034416 Pkd1l2 1700126L06Rik polycystic kidney disease 1 like 2 protein-coding common_peak2_190_1714_-0.0596213550733804_10.7141821835235_0.599886363500108 chr5 139251513 139254136 + 0.599886363500108 NA promoter-TSS (NM_001163316) promoter-TSS (NM_001163316) 500 NM_026269 67604 Mm.270137 NM_026269 ENSMUSG00000025858 Get4 1110007L15Rik|AW412535|Cee golgi to ER traffic protein 4 protein-coding common_peak2_55_334_0.125159775859146_8.45059717327471_0.59966656023164 chrX 8991282 8992830 + 0.59966656023164 NA Intergenic Intergenic -5384 NM_001099326 100042782 Mm.388703 NM_001099326 ENSMUSG00000078206 Fthl17d Fthl17L3|Gm14458|OTTMUSG00000016694 ferritin, heavy polypeptide-like 17, member D protein-coding common_peak1_51_365_-0.133666282456755_8.44886669705567_0.599666560231541 chr11 88117486 88118293 + 0.599666560231541 NA intron (NM_198013, intron 1 of 10) ID2|SINE|ID 18743 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_209_1921_-0.0562000789105745_10.8802925813185_0.599640005660481 chr17 33953991 33956807 + 0.599640005660481 NA promoter-TSS (NM_172620) promoter-TSS (NM_172620) 242 NM_011296 20084 Mm.298745 NM_011296 ENSMUSG00000008668 Rps18 H-2Ke3|H2-Ke3|Ke-3|ke3 ribosomal protein S18 protein-coding common_peak1_118_972_-0.0792236245414681_9.88668418251038_0.599428473750227 chr11 101081561 101083141 + 0.599428473750227 NA promoter-TSS (NM_001305982) promoter-TSS (NM_001305982) -214 NM_001305982 71743 Mm.182271 NM_027896 ENSMUSG00000001755 Coasy 1300003G02Rik|Dpck|Ppat|Ukr1 Coenzyme A synthase protein-coding common_peak2_90_621_0.091574272589444_9.32655790642533_0.5994069972768 chr13 62466063 62467412 + 0.5994069972768 NA promoter-TSS (NM_178875) promoter-TSS (NM_178875) 75 NM_178875 71508 Mm.442497 NM_178875 ENSMUSG00000055228 Zfp935 8430426H19Rik|Es113 zinc finger protein 935 protein-coding common_peak2_44_252_0.143185062870321_8.05458610612947_0.59927598926079 chr15 76879020 76879971 + 0.59927598926079 NA intron (NM_145916, intron 1 of 4) CpG 219 NM_145916 223669 Mm.38948 NM_145916 ENSMUSG00000033669 Zfp7 KRAB20|KRAB7|Krox-2|Zfp-7|Zfp65|Zfp80|Zfp86-rs1|mszf73-2 zinc finger protein 7 protein-coding common_peak1_44_252_0.143185062870321_8.05458610612947_0.59927598926079 chr1 33882976 33883784 + 0.59927598926079 NA intron (NM_001310484, intron 1 of 5) intron (NM_001310484, intron 1 of 5) 24241 NM_177235 320705 Mm.336619 NM_177235 ENSMUSG00000042182 Bend6 B230209C24Rik BEN domain containing 6 protein-coding common_peak1_44_252_0.143185062870321_8.05458610612947_0.59927598926079-2 chr17 35468452 35469109 + 0.59927598926079 NA Intergenic B1_Mus1|SINE|Alu -1309 NM_010391 15007 Mm.88795 NM_010391 ENSMUSG00000067235 H2-Q10 H-2Q10|Q10|Qa10 histocompatibility 2, Q region locus 10 protein-coding common_peak1_122_1011_-0.0774157934756001_9.94428567795651_0.59911849453697 chr1 153751361 153753196 + 0.59911849453697 NA intron (NM_011882, intron 2 of 8) intron (NM_011882, intron 2 of 8) 2852 NM_011882 24014 Mm.259254 NM_011882 ENSMUSG00000066800 Rnasel E230029I04Rik ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) protein-coding common_peak1_33_222_-0.170751327759778_7.71552423604042_0.598994207242779 chr8 111853909 111854456 + 0.598994207242779 NA exon (NM_011801, exon 1 of 7) exon (NM_011801, exon 1 of 7) 128 NM_011801 23837 Mm.279437 NM_011801 ENSMUSG00000031954 Cfdp1 AA408409|Bcnt|Bucentaur|Cfdp|cp27 craniofacial development protein 1 protein-coding common_peak2_33_222_-0.170751327759778_7.71552423604042_0.598994207242779 chr14 14706050 14707073 + 0.598994207242779 NA intron (NM_001033270, intron 1 of 24) intron (NM_001033270, intron 1 of 24) 3536 NM_001033270 218756 Mm.258893 NM_001033270 ENSMUSG00000021733 Slc4a7 E430014N10Rik|NBC3|NBCn1|NBCn1-G solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein-coding common_peak2_67_429_0.108568033757424_8.80247686646817_0.598984660838779 chr11 52045661 52047496 + 0.598984660838779 NA intron (NM_001166654, intron 13 of 13) intron (NM_001166654, intron 13 of 13) 42357 NM_001166653 213084 Mm.280557 NM_153785 ENSMUSG00000020389 Cdkl3 AI852479|B230379H01Rik cyclin-dependent kinase-like 3 protein-coding common_peak2_148_1156_0.0687518530001316_10.2105490756076_0.598868524251729 chr17 36836129 36837977 + 0.598868524251729 NA promoter-TSS (NM_001286726) promoter-TSS (NM_001286726) -93 NM_001025599 22670 Mm.34587 NM_030698 ENSMUSG00000024457 Trim26 AI462198|Zfp173|Zfp1736 tripartite motif-containing 26 protein-coding common_peak2_43_300_-0.147209622879394_8.16001486532_0.598777359052117 chr5 117976425 117977749 + 0.598777359052117 NA intron (NM_145564, intron 1 of 11) CpG 317 NM_145564 231670 Mm.21912 NM_145564 ENSMUSG00000032898 Fbxo21 2810425J22Rik|AU016673 F-box protein 21 protein-coding common_peak1_43_300_-0.147209622879394_8.16001486532_0.598777359052117 chr6 92214126 92215037 + 0.598777359052117 NA intron (NM_030081, intron 1 of 11) CpG 230 NM_030081 78287 Mm.290734 NM_030081 ENSMUSG00000014550 Rbsn 5330426D11Rik|Zfyve20 rabenosyn, RAB effector protein-coding common_peak2_18_114_-0.245125847547484_6.72292712717063_0.598772289134449 chr17 36205621 36206474 + 0.598772289134449 NA Intergenic CpG -15896 NM_008208 15043 Mm.426002 NM_008208 ENSMUSG00000054128 H2-T3 H-2T3|H2-Tw3|MumuTL|TL histocompatibility 2, T region locus 3 protein-coding common_peak1_18_114_-0.245125847547484_6.72292712717063_0.598772289134449-2 chr5 123144537 123144904 + 0.598772289134449 NA intron (NM_001040398, intron 4 of 16) intron (NM_001040398, intron 4 of 16) 2527 NM_001040398 208043 Mm.250391 NM_177581 ENSMUSG00000038384 Setd1b AA516740|BC035291|KMT2G|mKIAA1076 SET domain containing 1B protein-coding common_peak1_18_114_-0.245125847547484_6.72292712717063_0.598772289134449 chr4 147848027 147848361 + 0.598772289134449 NA intron (NM_198619, intron 1 of 3) intron (NM_198619, intron 1 of 3) 181 NM_198619 242747 Mm.332053 NM_198619 ENSMUSG00000059423 Zfp933 2810408P10Rik zinc finger protein 933 protein-coding common_peak2_126_1051_-0.0767082951182569_10.0005648417332_0.598753097591882 chr16 43707898 43710955 + 0.598753097591882 NA Intergenic Intergenic -45242 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak1_24_156_-0.208605556755243_7.19031797051401_0.598724988253947 chr1 36720345 36720842 + 0.598724988253947 NA intron (NR_040290, intron 2 of 8) MIRb|SINE|MIR 6055 NR_040290 71166 Mm.157049 NR_040290 ENSMUSG00000102416 4933424G06Rik 1700104I15Rik RIKEN cDNA 4933424G06 gene ncRNA common_peak1_24_156_-0.208605556755243_7.19031797051401_0.598724988253947-3 chr3 85574176 85574602 + 0.598724988253947 NA intron (NM_144896, intron 1 of 12) intron (NM_144896, intron 1 of 12) 260 NM_144896 229487 Mm.52275 NM_144896 ENSMUSG00000028085 Gatb 9430026F02Rik|Pet112|Pet112l glutamyl-tRNA(Gln) amidotransferase, subunit B protein-coding unique_peak2_24_156_-0.208605556755243_7.19031797051401_0.598724988253947 chr10 127194842 127195749 + 0.598724988253947 NA promoter-TSS (NR_045716) promoter-TSS (NR_045716) 46 NR_045716 100038591 Mm.441071 NR_045715 ENSMUSG00000097331 F420014N23Rik ENSMUSG00000074658 RIKEN cDNA F420014N23 gene ncRNA unique_peak2_24_156_-0.208605556755243_7.19031797051401_0.598724988253947-3 chr7 110164249 110165085 + 0.598724988253947 NA Intergenic Intergenic 42608 NM_009516 22390 Mm.287173 NM_009516 ENSMUSG00000031016 Wee1 Wee1A WEE 1 homolog 1 (S. pombe) protein-coding common_peak1_27_136_0.188532667057399_7.19229841648923_0.598724988253947 chr18 58659482 58660001 + 0.598724988253947 NA exon (NM_025478, exon 1 of 5) exon (NM_025478, exon 1 of 5) 259 NM_025478 66307 Mm.182574 NM_025478 ENSMUSG00000024601 Isoc1 2610034N03Rik isochorismatase domain containing 1 protein-coding common_peak1_24_156_-0.208605556755243_7.19031797051401_0.598724988253947-2 chr13 59655598 59656138 + 0.598724988253947 NA intron (NM_001035122, intron 3 of 9) intron (NM_001035122, intron 3 of 9) 19916 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding unique_peak2_27_136_0.188532667057399_7.19229841648923_0.598724988253947 chr7 127165525 127166538 + 0.598724988253947 NA Intergenic Intergenic -28208 NM_001037810 20737 Mm.283714 NM_009259 ENSMUSG00000051457 Spn A630014B01Rik|Cd43|Galgp|Ly-48|Ly48 sialophorin protein-coding unique_peak2_24_156_-0.208605556755243_7.19031797051401_0.598724988253947-2 chr12 35754648 35755798 + 0.598724988253947 NA Intergenic Intergenic -60105 NR_045050 71581 Mm.100110 NR_045050 9130015A21Rik 100043575|Gm4527 RIKEN cDNA 9130015A21 gene ncRNA common_peak2_24_156_-0.208605556755243_7.19031797051401_0.598724988253947 chr4 98281496 98282452 + 0.598724988253947 NA Intergenic MTD|LTR|ERVL-MaLR 101291 NM_053157 94043 Mm.331719 NM_053157 ENSMUSG00000028563 Tm2d1 2310026L18Rik|AA990549|Bbp TM2 domain containing 1 protein-coding common_peak2_66_491_-0.111970805189516_8.88652910274448_0.598588969058062 chr3 59119383 59120900 + 0.598588969058062 NA intron (NM_001287119, intron 1 of 2) intron (NM_001287119, intron 1 of 2) 10621 NM_001008497 140795 Mm.439021 NM_133200 ENSMUSG00000036381 P2ry14 A330108O13Rik|Gpr105|P2Y14 purinergic receptor P2Y, G-protein coupled, 14 protein-coding common_peak2_57_414_-0.121691900535362_8.63612157596661_0.598566223098115 chr6 120977400 120978704 + 0.598566223098115 NA intron (NM_001270475, intron 20 of 31) ID_B1|SINE|B4 -61232 NM_007544 12122 Mm.235081 NM_007544 ENSMUSG00000004446 Bid 2700049M22Rik|AI875481|AU022477 BH3 interacting domain death agonist protein-coding common_peak2_57_414_-0.121691900535362_8.63612157596661_0.598566223098115-2 chr8 69088549 69089558 + 0.598566223098115 NA 5' UTR (NM_153054, exon 1 of 17) 5' UTR (NM_153054, exon 1 of 17) 169 NM_153054 110877 Mm.19301 NM_153054 ENSMUSG00000036330 Slc18a1 4832416I10Rik|Vat1|Vmat1 solute carrier family 18 (vesicular monoamine), member 1 protein-coding common_peak1_155_1344_-0.0672223854634133_10.3597792647123_0.598517817309568 chr7 139973236 139975176 + 0.598517817309568 NA intron (NM_001033465, intron 6 of 6) intron (NM_001033465, intron 6 of 6) 4549 NM_001033465 381933 Mm.440431 NM_001033465 ENSMUSG00000073795 6430531B16Rik Gm1093 RIKEN cDNA 6430531B16 gene protein-coding common_peak1_276_2681_-0.0468734728569444_11.365656785476_0.598349811058504 chr11 83662405 83665068 + 0.598349811058504 NA intron (NM_013652, intron 2 of 2) intron (NM_013652, intron 2 of 2) 1152 NM_013652 20303 Mm.244263 NM_013652 ENSMUSG00000018930 Ccl4 AT744.1|Act-2|MIP-1B|Mip1b|Scya4 chemokine (C-C motif) ligand 4 protein-coding common_peak1_38_260_-0.154962546962024_7.95042472308887_0.598316191775223 chr6 114906600 114907538 + 0.598316191775223 NA intron (NM_177683, intron 1 of 4) intron (NM_177683, intron 1 of 4) 14683 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_116_853_0.0789857061406547_9.77758511269082_0.598145827445619 chr3 88592048 88593457 + 0.598145827445619 NA Intergenic Intergenic 13081 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak1_34_182_0.165745876239491_7.59857277640379_0.598028985019175 chr5 45519517 45520236 + 0.598028985019175 NA promoter-TSS (NM_025895) promoter-TSS (NM_025895) -353 NM_025895 66999 Mm.283045 NM_025895 ENSMUSG00000015804 Med28 1500003D12Rik|AI451633|AU045690|Eg1|FKSG20|magicin mediator complex subunit 28 protein-coding common_peak2_34_182_0.165745876239491_7.59857277640379_0.598028985019175 chr15 74962802 74964071 + 0.598028985019175 NA Intergenic MLTR14|LTR|ERV1 8330 NM_001164040 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding unique_peak2_34_182_0.165745876239491_7.59857277640379_0.598028985019175 chr6 40324895 40326038 + 0.598028985019175 NA promoter-TSS (NM_023538) promoter-TSS (NM_023538) -12 NM_023538 69923 Mm.32840 NM_023538 ENSMUSG00000029916 Agk 2610037M15Rik|6720408I04Rik|AI465370|Mulk acylglycerol kinase protein-coding common_peak2_179_1466_0.0607501042639544_10.5490282078054_0.597926776990309 chr11 116022358 116025128 + 0.597926776990309 NA exon (NM_008211, exon 3 of 4) exon (NM_008211, exon 3 of 4) 761 NM_008211 15081 Mm.18516 NM_008211 ENSMUSG00000016559 H3f3b 9430068D06Rik|H3.3B H3 histone, family 3B protein-coding common_peak2_179_1466_0.0607501042639544_10.5490282078054_0.597926776990309-2 chr13 93784374 93788237 + 0.597926776990309 NA intron (NM_009712, intron 1 of 7) intron (NM_009712, intron 1 of 7) -4472 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak2_60_440_-0.120115394510549_8.72457714830225_0.597826482641595 chr14 50869808 50871187 + 0.597826482641595 NA promoter-TSS (NM_009351) promoter-TSS (NM_009351) 57 NM_009351 21745 Mm.318736 NM_009351 ENSMUSG00000006281 Tep1 Tp1 telomerase associated protein 1 protein-coding common_peak2_212_1810_0.0547232310501329_10.8499324464752_0.597618117734614 chr2 29124170 29126352 + 0.597618117734614 NA 5' UTR (NM_198033, exon 1 of 26) 5' UTR (NM_198033, exon 1 of 26) 269 NM_198033 269254 Mm.41867 NM_198033 ENSMUSG00000043535 Setx A130090N03|A930037J23Rik|AOA2|AW060766|Als4|SCAR1|Sen1|mKIAA0625 senataxin protein-coding common_peak1_173_1532_-0.0627318398065686_10.5507760617555_0.597530854504494 chr11 54786531 54787914 + 0.597530854504494 NA intron (NM_178626, intron 1 of 5) CpG 481 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding common_peak2_136_1041_0.0711979942563516_10.0607385594067_0.597504162741796 chr10 121739096 121740674 + 0.597504162741796 NA promoter-TSS (NM_173022) promoter-TSS (NM_173022) -52 NM_173022 270802 Mm.209172 NM_173022 ENSMUSG00000053684 BC048403 E030027L10 cDNA sequence BC048403 protein-coding unique_peak2_22_142_-0.221410532684879_7.04916607043595_0.597095862804869 chr7 24593374 24594292 + 0.597095862804869 NA 5' UTR (NM_023154, exon 2 of 8) 5' UTR (NM_023154, exon 2 of 8) -6192 NM_001033205 101544 Mm.20117 NM_001033205 ENSMUSG00000066721 Zfp575 AI326876|Znf575 zinc finger protein 575 protein-coding common_peak1_22_142_-0.221410532684879_7.04916607043595_0.597095862804869 chr17 28218923 28219449 + 0.597095862804869 NA intron (NM_027185, intron 3 of 10) RLTR25B|LTR|ERVK 11408 NM_027185 23853 Mm.204731 NM_027185 ENSMUSG00000002257 Def6 2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6 differentially expressed in FDCP 6 protein-coding common_peak1_22_142_-0.221410532684879_7.04916607043595_0.597095862804869-2 chr4 121208150 121208740 + 0.597095862804869 NA Intergenic Intergenic -19911 NM_001081013 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding common_peak1_15_65_0.251859143766715_6.17032369124181_0.597058903291781-2 chr8 83899985 83900385 + 0.597058903291781 NA promoter-TSS (NM_181039) promoter-TSS (NM_181039) 87 NM_181039 330814 Mm.260733 NM_181039 ENSMUSG00000013033 Adgrl1 2900070I05Rik|AI182398|CLIBA|Lec2|Lphn1|mKIAA0821 adhesion G protein-coupled receptor L1 protein-coding common_peak1_15_65_0.251859143766715_6.17032369124181_0.597058903291781 chr4 130018166 130018552 + 0.597058903291781 NA intron (NM_173071, intron 26 of 29) intron (NM_173071, intron 26 of 29) 26305 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding unique_peak2_20_128_-0.233752611624756_6.89435094961088_0.596924666573505 chr14 54000576 54001611 + 0.596924666573505 NA Intergenic Intergenic 252836 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_20_128_-0.233752611624756_6.89435094961088_0.596924666573505-6 chr6 136466394 136466952 + 0.596924666573505 NA Intergenic Intergenic -51104 NM_001201390 100502936 Mm.21182 NM_001201390 ENSMUSG00000045291 E330021D16Rik C85549 RIKEN cDNA E330021D16 gene protein-coding unique_peak2_20_128_-0.233752611624756_6.89435094961088_0.596924666573505-3 chr8 119895567 119896520 + 0.596924666573505 NA Intergenic RLTR4_MM-int|LTR|ERV1 -14317 NM_009462 22224 Mm.256910 NM_009462 ENSMUSG00000031826 Usp10 2610014N07Rik|UBPO|Uchrp|mKIAA0190 ubiquitin specific peptidase 10 protein-coding common_peak1_20_128_-0.233752611624756_6.89435094961088_0.596924666573505-4 chr5 30231963 30232465 + 0.596924666573505 NA promoter-TSS (NM_027652) promoter-TSS (NM_027652) -404 NM_027652 28042 Mm.168854 NM_027652 ENSMUSG00000075703 Selenoi 4933402G07Rik|AI448296|AI452230|C79563|D5Wsu178e|Ept1|SELI|mKIAA1724 selenoprotein I protein-coding unique_peak2_20_128_-0.233752611624756_6.89435094961088_0.596924666573505-4 chrX 123103033 123103981 + 0.596924666573505 NA promoter-TSS (NM_028426) promoter-TSS (NM_028426) -16 NM_001310652 73061 Mm.292979 NM_028426 ENSMUSG00000079450 Cldn34c1 3110007F17Rik claudin 34C1 protein-coding common_peak2_20_128_-0.233752611624756_6.89435094961088_0.596924666573505 chr14 65592481 65593261 + 0.596924666573505 NA intron (NM_028811, intron 1 of 14) intron (NM_028811, intron 1 of 14) 241 NM_001253812 74195 Mm.29719 NM_028811 ENSMUSG00000022031 Elp3 2610507P14Rik|KAT9 elongator acetyltransferase complex subunit 3 protein-coding common_peak1_20_128_-0.233752611624756_6.89435094961088_0.596924666573505-2 chr15 6574166 6574748 + 0.596924666573505 NA Intergenic Intergenic -5390 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_20_128_-0.233752611624756_6.89435094961088_0.596924666573505 chr10 112000118 112000549 + 0.596924666573505 NA Intergenic MER44B|DNA|TcMar-Tigger -3069 NM_028608 73690 Mm.173790 NM_028608 ENSMUSG00000056888 Glipr1 2410114O14Rik|RTVP-1|RTVP1|mRTVP-1 GLI pathogenesis-related 1 (glioma) protein-coding common_peak1_20_128_-0.233752611624756_6.89435094961088_0.596924666573505-5 chr5 64958965 64959304 + 0.596924666573505 NA intron (NM_011604, intron 1 of 1) intron (NM_011604, intron 1 of 1) 900 NM_011604 21899 Mm.42146 NM_011604 ENSMUSG00000051498 Tlr6 - toll-like receptor 6 protein-coding common_peak1_20_128_-0.233752611624756_6.89435094961088_0.596924666573505-3 chr4 115830713 115831078 + 0.596924666573505 NA intron (NM_175308, intron 1 of 3) intron (NM_175308, intron 1 of 3) 2803 NM_175308 100465 Mm.35571 NM_175308 ENSMUSG00000028709 Mob3c AW822253|D130076I06Rik|Mobkl2c MOB kinase activator 3C protein-coding unique_peak2_20_128_-0.233752611624756_6.89435094961088_0.596924666573505-2 chr18 62726401 62727424 + 0.596924666573505 NA intron (NM_001168423, intron 1 of 4) MTD|LTR|ERVL-MaLR 14475 NM_001168423 100038417 Mm.387557 NM_001168423 ENSMUSG00000073551 Spink13 ENSMUSG00000073551|Gm10534|Spink5l3 serine peptidase inhibitor, Kazal type 13 protein-coding common_peak2_175_1425_0.0618764098091305_10.5086964713485_0.596918975672644 chr2 93045024 93046790 + 0.596918975672644 NA intron (NM_001177536, intron 1 of 6) CpG 237 NM_001177536 100042784 Mm.102816 NM_001177536 ENSMUSG00000075028 Prdm11 8030443D09Rik|AA163972|Gm707 PR domain containing 11 protein-coding common_peak2_187_1681_-0.0596062804564124_10.6861588500269_0.59688466887729 chr7 72274012 72277191 + 0.59688466887729 NA intron (NM_001024703, intron 1 of 22) intron (NM_001024703, intron 1 of 22) 30994 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak2_47_274_0.13709997086643_8.17183779384524_0.596708032192751 chr17 5327115 5328592 + 0.596708032192751 NA intron (NM_001085355, intron 15 of 19) intron (NM_001085355, intron 15 of 19) 90914 NM_175349 106557 Mm.432764 NM_175349 ENSMUSG00000101959 Ldhal6b 4933402O15Rik|AI326310|LDHL|Ldhal lactate dehydrogenase A-like 6B protein-coding common_peak2_46_324_-0.141164820489799_8.27371349767092_0.596163588715662 chr6 113739953 113741224 + 0.596163588715662 NA promoter-TSS (NM_024206) promoter-TSS (NM_024206) 93 NM_024206 110379 Mm.29296 NM_024206 ENSMUSG00000030298 Sec13 1110003H02Rik|Sec13l1|Sec13r SEC13 homolog, nuclear pore and COPII coat complex component protein-coding common_peak1_46_324_-0.141164820489799_8.27371349767092_0.596163588715662 chr10 57485980 57487093 + 0.596163588715662 NA promoter-TSS (NR_045353) promoter-TSS (NR_045353) 151 NM_008297 15500 Mm.261395 NM_008297 ENSMUSG00000019878 Hsf2 AI661205 heat shock factor 2 protein-coding common_peak2_127_1060_-0.0751187442305294_10.0136495687995_0.596159872658854 chr3 116006396 116008722 + 0.596159872658854 NA promoter-TSS (NM_023214) promoter-TSS (NM_023214) 110 NM_001163515 58193 Mm.41739 NM_021388 ENSMUSG00000027963 Extl2 3000001D04Rik|AW146439 exostoses (multiple)-like 2 protein-coding common_peak1_267_2576_-0.0477084993371832_11.307622572191_0.596156094575392 chr11 75678432 75680550 + 0.596156094575392 NA exon (NM_001277219, exon 1 of 3) exon (NM_001277219, exon 1 of 3) 232 NM_001277221 12928 Mm.280125 NM_133656 ENSMUSG00000017776 Crk Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38 v-crk avian sarcoma virus CT10 oncogene homolog protein-coding common_peak2_165_1447_-0.0637277067285016_10.467982033719_0.595797186738479 chr13 107020741 107023251 + 0.595797186738479 NA promoter-TSS (NR_015471) promoter-TSS (NR_015471) 118 NM_001145779 16563 Mm.355686 NM_008442 ENSMUSG00000021693 Kif2a C530030B14Rik|Kif2|Kns2|M-kinesin kinesin family member 2A protein-coding common_peak2_434_4406_0.0353222362667367_12.1232422994108_0.595532145980473 chr3 60497397 60505538 + 0.595532145980473 NA intron (NM_001253709, intron 1 of 8) CpG 288 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_91_630_0.0901892314836736_9.34659081072439_0.595280527804861 chr6 47763323 47764413 + 0.595280527804861 NA Intergenic CpG -10943 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_31_207_-0.177574143829568_7.61165264622631_0.594987101833315 chr3 102723591 102724588 + 0.594987101833315 NA intron (NR_040588, intron 3 of 3) intron (NR_040588, intron 3 of 3) -10681 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding common_peak1_31_207_-0.177574143829568_7.61165264622631_0.594987101833315-2 chr2 166693851 166694519 + 0.594987101833315 NA intron (NR_105783, intron 2 of 2) B1_Mus1|SINE|Alu 19647 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding common_peak1_31_207_-0.177574143829568_7.61165264622631_0.594987101833315 chr15 73152735 73153227 + 0.594987101833315 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 31966 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding unique_peak2_31_207_-0.177574143829568_7.61165264622631_0.594987101833315 chr17 50185124 50186407 + 0.594987101833315 NA intron (NM_181397, intron 1 of 9) intron (NM_181397, intron 1 of 9) 4732 NM_181397 76438 Mm.41854 NM_181397 ENSMUSG00000039316 Rftn1 2310015N21Rik|AI853526 raftlin lipid raft linker 1 protein-coding unique_peak2_25_124_0.189636959978845_7.06060276465151_0.594874371226338-2 chrX 96019775 96021031 + 0.594874371226338 NA Intergenic Intergenic -63429 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding unique_peak2_25_124_0.189636959978845_7.06060276465151_0.594874371226338-3 chrX 169215479 169216468 + 0.594874371226338 NA intron (NM_001287530, intron 1 of 12) intron (NM_001287530, intron 1 of 12) -28764 NM_009666 11704 Mm.391342 NM_009666 ENSMUSG00000031354 Amelx ALGN|AMGL|AMGX|Amel|Amg|LRAP|Rgsc888 amelogenin, X-linked protein-coding unique_peak2_25_124_0.189636959978845_7.06060276465151_0.594874371226338 chr11 34395523 34396632 + 0.594874371226338 NA intron (NM_001025382, intron 1 of 3) intron (NM_001025382, intron 1 of 3) 81255 NM_001025382 574403 Mm.444796 NM_001025382 ENSMUSG00000069911 Fam196b EG574403|Gm6041 family with sequence similarity 196, member B protein-coding common_peak2_25_124_0.189636959978845_7.06060276465151_0.594874371226338 chr17 27017568 27018500 + 0.594874371226338 NA promoter-TSS (NM_001251881) promoter-TSS (NM_001251881) -1 NM_001251881 70772 Mm.440437 NM_027544 ENSMUSG00000048731 Ggnbp1 0610031G08Rik|mdf gametogenetin binding protein 1 protein-coding common_peak2_71_461_0.106160942829321_8.90482951283072_0.594859949606391 chr18 44379748 44381505 + 0.594859949606391 NA 5' UTR (NM_027490, exon 1 of 11) 5' UTR (NM_027490, exon 1 of 11) 126 NM_027490 70640 Mm.87629 NM_027490 ENSMUSG00000024472 Dcp2 2410015D23Rik|5730537H01Rik|AL118268 decapping mRNA 2 protein-coding common_peak1_97_771_-0.0889684891710392_9.54797279268256_0.594810496649483 chr13 33067210 33068936 + 0.594810496649483 NA Intergenic ORR1F|LTR|ERVL-MaLR -16030 NM_173052 282663 Mm.314490 NM_173052 ENSMUSG00000051029 Serpinb1b 6330533H24Rik|EIB|Serpin1b1|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1b protein-coding common_peak1_97_771_-0.0889684891710392_9.54797279268256_0.594810496649483-2 chr6 129747517 129748871 + 0.594810496649483 NA Intergenic L1Md_T|LINE|L1 -7710 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak1_83_642_-0.0979756611567364_9.27968709674958_0.594747398277746 chr6 149141244 149142376 + 0.594747398277746 NA intron (NM_001252097, intron 1 of 2) B1F|SINE|Alu 297 NM_177101 320204 Mm.274099 NM_177101 ENSMUSG00000039958 Etfbkmt 4833442J19Rik|AI256744|ETFB-KMT|Mettl20 electron transfer flavoprotein beta subunit lysine methyltransferase protein-coding common_peak1_133_1012_0.0727375525349423_10.0207872350686_0.594738620293148 chr18 90509554 90511100 + 0.594738620293148 NA exon (NM_198295, exon 1 of 16) exon (NM_198295, exon 1 of 16) 173 NM_198295 67988 Mm.268041 NM_198295 ENSMUSG00000024614 Tmx3 6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830 thioredoxin-related transmembrane protein 3 protein-coding common_peak2_176_1436_0.0608165747377729_10.5192526338262_0.594700726476603 chr17 21961662 21963461 + 0.594700726476603 NA promoter-TSS (NM_001025373) promoter-TSS (NM_001025373) 2 NM_001025373 74670 Mm.26540 NM_001025373 ENSMUSG00000053347 Zfp943 4930432O21Rik zinc finger prtoein 943 protein-coding common_peak1_249_2211_0.0495974199663536_11.1359343802179_0.594627768097377 chr2 70824116 70826558 + 0.594627768097377 NA 5' UTR (NM_172664, exon 1 of 20) 5' UTR (NM_172664, exon 1 of 20) 143 NM_172664 228012 Mm.136511 NM_172664 ENSMUSG00000041997 Tlk1 4930545J15Rik tousled-like kinase 1 protein-coding common_peak1_23_111_0.206420546034491_6.91056519507485_0.594454218156097 chr9 121846832 121847344 + 0.594454218156097 NA Intergenic Intergenic -7627 NM_028384 100502861 Mm.335550 NM_028384 ENSMUSG00000079235 Ccdc13 2900041A11Rik|Gm188 coiled-coil domain containing 13 protein-coding unique_peak2_23_111_0.206420546034491_6.91056519507485_0.594454218156097 chr8 13703405 13704342 + 0.594454218156097 NA Intergenic PB1D9|SINE|Alu -2016 NM_001101519 403185 Mm.252143 NM_001101519 ENSMUSG00000090336 4932443I19Rik A230061C02Rik|Gm1106 RIKEN cDNA 4932443I19 gene protein-coding common_peak2_303_2822_0.0438000346926231_11.484913430796_0.594410019658757 chr7 127292439 127298659 + 0.594410019658757 NA promoter-TSS (NM_008400) promoter-TSS (NM_008400) -711 NM_001253873 16408 Mm.1618 NM_008400 ENSMUSG00000030830 Itgal (p180)|Cd11a|LFA-1|LFA-1A|Ly-15|Ly-21 integrin alpha L protein-coding common_peak2_90_706_-0.0932213620893521_9.41895572376472_0.594361839160163 chr12 28648888 28650579 + 0.594361839160163 NA non-coding (NR_104608, exon 1 of 7) non-coding (NR_104608, exon 1 of 7) 131 NM_001286865 19819 Mm.10152 NM_011275 ENSMUSG00000020630 Rnaseh1 - ribonuclease H1 protein-coding common_peak1_50_297_0.128502256665294_8.28341964879481_0.594267295021813 chr10 128409172 128409886 + 0.594267295021813 NA intron (NM_027257, intron 1 of 6) intron (NM_027257, intron 1 of 6) 267 NM_027257 69917 Mm.46614 NM_027257 ENSMUSG00000025374 Nabp2 2610036N15Rik|Obfc2b|SSB1 nucleic acid binding protein 2 protein-coding common_peak1_17_76_0.237898821177766_6.38573595128378_0.593988304462041 chr6 54158015 54158491 + 0.593988304462041 NA intron (NM_001163640, intron 1 of 12) intron (NM_001163640, intron 1 of 12) -106605 NM_001311133 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak1_17_76_0.237898821177766_6.38573595128378_0.593988304462041-2 chr9 118073714 118074059 + 0.593988304462041 NA intron (NM_026442, intron 3 of 3) Lx5c|LINE|L1 33364 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_70_526_-0.108499605790197_8.98740934874212_0.593976247951738 chr7 143068514 143070210 + 0.593976247951738 NA promoter-TSS (NM_001115085) promoter-TSS (NM_001115085) -6 NM_020285 56844 Mm.139675 NM_020285 ENSMUSG00000045752 Tssc4 AA241958|ESTM671070 tumor-suppressing subchromosomal transferable fragment 4 protein-coding unique_peak2_19_87_0.231702608993479_6.57528292313404_0.593954113235443-2 chr11 19890822 19891550 + 0.593954113235443 NA Intergenic Intergenic -33256 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_19_87_0.231702608993479_6.57528292313404_0.593954113235443-4 chrX 75055142 75055592 + 0.593954113235443 NA intron (NM_181584, intron 1 of 9) Lx3B|LINE|L1 29538 NM_181584 210710 Mm.267056 NM_181584 ENSMUSG00000032750 Gab3 5930433H21Rik growth factor receptor bound protein 2-associated protein 3 protein-coding common_peak2_19_87_0.231702608993479_6.57528292313404_0.593954113235443 chr13 51744658 51745257 + 0.593954113235443 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 48790 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding unique_peak2_19_87_0.231702608993479_6.57528292313404_0.593954113235443 chr10 37136516 37137271 + 0.593954113235443 NA exon (NM_008538, exon 2 of 2) exon (NM_008538, exon 2 of 2) 2033 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding unique_peak2_19_87_0.231702608993479_6.57528292313404_0.593954113235443-3 chr18 50031044 50031808 + 0.593954113235443 NA intron (NM_001177759, intron 1 of 1) intron (NM_001177759, intron 1 of 1) -21856 NM_134131 106869 Mm.27740 NM_134131 ENSMUSG00000062210 Tnfaip8 AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2|Tipe tumor necrosis factor, alpha-induced protein 8 protein-coding common_peak1_19_87_0.231702608993479_6.57528292313404_0.593954113235443-3 chr4 149666594 149667099 + 0.593954113235443 NA intron (NM_001164050, intron 2 of 23) (T)n|Simple_repeat|Simple_repeat -3530 NM_001164052 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_19_87_0.231702608993479_6.57528292313404_0.593954113235443-2 chr16 59639461 59639889 + 0.593954113235443 NA promoter-TSS (NM_019665) promoter-TSS (NM_019665) -336 NM_019665 56297 Mm.392505 NM_019665 ENSMUSG00000022722 Arl6 1110018H24Rik|2210411E14Rik|BBS3 ADP-ribosylation factor-like 6 protein-coding common_peak1_19_87_0.231702608993479_6.57528292313404_0.593954113235443 chr10 80028308 80028767 + 0.593954113235443 NA intron (NM_001142701, intron 19 of 22) intron (NM_001142701, intron 19 of 22) 8862 NM_027521 70719 Mm.243954 NM_027521 ENSMUSG00000035697 Hmha1 6330406L22Rik|AW539505|Ha-1 histocompatibility (minor) HA-1 protein-coding common_peak1_198_1800_-0.0576006720588591_10.7857821298768_0.593837648143356 chr6 145340896 145342120 + 0.593837648143356 NA Intergenic CpG -46117 NR_003625 381827 Mm.179075 NM_001001987 1700073E17Rik - ribosomal protein L7 pseudogene pseudo common_peak1_41_284_-0.15073115406725_8.07945253201848_0.593758496725239 chr2 119034877 119035464 + 0.593758496725239 NA exon (NM_173450, exon 1 of 3) exon (NM_173450, exon 1 of 3) 380 NM_173450 271842 Mm.33617 NM_173450 ENSMUSG00000027324 Rpusd2 4921503C21Rik|9630001E10|BB231107 RNA pseudouridylate synthase domain containing 2 protein-coding common_peak1_41_284_-0.15073115406725_8.07945253201848_0.593758496725239-2 chr6 113740005 113740912 + 0.593758496725239 NA intron (NM_024206, intron 1 of 8) intron (NM_024206, intron 1 of 8) 223 NM_024206 110379 Mm.29296 NM_024206 ENSMUSG00000030298 Sec13 1110003H02Rik|Sec13l1|Sec13r SEC13 homolog, nuclear pore and COPII coat complex component protein-coding common_peak1_41_284_-0.15073115406725_8.07945253201848_0.593758496725239-3 chrX 36644733 36645406 + 0.593758496725239 NA 5' UTR (NM_001081956, exon 1 of 7) 5' UTR (NM_001081956, exon 1 of 7) 345 NM_001081956 338351 Mm.116704 NM_001081956 ENSMUSG00000059708 Akap17b AA407619|AKAP-17B|B230333C21Rik|C230056F04Rik|PRKA17B|Sfrs17b|Srsf17b|Talia A kinase (PRKA) anchor protein 17B protein-coding common_peak2_42_238_0.144860362273202_7.97329698911735_0.593574285268237 chr11 70014717 70015614 + 0.593574285268237 NA exon (NM_017366, exon 2 of 20) exon (NM_017366, exon 2 of 20) 263 NM_017366 11370 Mm.18630 NM_017366 ENSMUSG00000018574 Acadvl vlcad acyl-Coenzyme A dehydrogenase, very long chain protein-coding common_peak2_315_2962_0.0424808025247465_11.5540833122237_0.593507266922988 chr2 167502447 167506462 + 0.593507266922988 NA intron (NM_030743, intron 3 of 7) intron (NM_030743, intron 3 of 7) -11580 NM_170756 263876 Mm.34342 NM_170756 ENSMUSG00000047030 Spata2 AI504642|mKIAA0757 spermatogenesis associated 2 protein-coding common_peak1_21_99_0.215941552919227_6.75182696623434_0.59322119704485-2 chr11 44518041 44518537 + 0.59322119704485 NA promoter-TSS (NM_028862) promoter-TSS (NM_028862) -675 NM_028862 74315 Mm.156771 NM_028862 ENSMUSG00000019189 Rnf145 3732413I11Rik|TMRF1 ring finger protein 145 protein-coding common_peak1_21_99_0.215941552919227_6.75182696623434_0.59322119704485 chr10 77258650 77259076 + 0.59322119704485 NA promoter-TSS (NM_030262) promoter-TSS (NM_030262) 360 NR_026944 100169878 Mm.420901 NR_026944 ENSMUSG00000078444 Gm10941 ENSMUSG00000078444 predicted gene 10941 ncRNA common_peak1_21_99_0.215941552919227_6.75182696623434_0.59322119704485-5 chr8 14961869 14962325 + 0.59322119704485 NA intron (NM_172751, intron 16 of 28) intron (NM_172751, intron 16 of 28) -48928 NM_029116 74901 Mm.46675 NM_029116 ENSMUSG00000055675 Kbtbd11 2900016B01Rik|4930465M17Rik|mKIAA0711 kelch repeat and BTB (POZ) domain containing 11 protein-coding common_peak1_21_99_0.215941552919227_6.75182696623434_0.59322119704485-3 chr7 101636345 101636721 + 0.59322119704485 NA Intergenic ORR1B1|LTR|ERVL-MaLR -27235 NM_009191 20480 Mm.3990 NM_009191 ENSMUSG00000001829 Clpb AL118244|Skd3 ClpB caseinolytic peptidase B protein-coding common_peak1_21_99_0.215941552919227_6.75182696623434_0.59322119704485-4 chr7 127128879 127129373 + 0.59322119704485 NA Intergenic B4A|SINE|B4 -7097 NM_133686 67375 Mm.26928 NM_133686 ENSMUSG00000030674 Qprt 2410027J01Rik|AI647766|QPRTase quinolinate phosphoribosyltransferase protein-coding common_peak1_32_169_0.167929011523178_7.49335544189929_0.593154382500673 chr16 16994932 16995601 + 0.593154382500673 NA intron (NM_011949, intron 1 of 8) B1_Mur4|SINE|Alu 11884 NM_001038663 26413 Mm.196581 NM_011949 ENSMUSG00000063358 Mapk1 9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk mitogen-activated protein kinase 1 protein-coding common_peak2_36_245_-0.16273085412783_7.86114907827533_0.593035335782697 chr5 62908348 62909703 + 0.593035335782697 NA Intergenic Intergenic 95202 NM_001170705 100322896 Mm.479821 NM_001170705 ENSMUSG00000090326 Dthd1 Gm17384 death domain containing 1 protein-coding common_peak2_67_500_-0.111905909848325_8.91271383827105_0.593030278887159 chr14 45317782 45319394 + 0.593030278887159 NA promoter-TSS (NM_015774) promoter-TSS (NM_015774) -16 NM_015774 50527 Mm.387108 NM_015774 ENSMUSG00000021831 Ero1l ERO1-L|Ero1a ERO1-like (S. cerevisiae) protein-coding common_peak2_67_500_-0.111905909848325_8.91271383827105_0.593030278887159-2 chr15 76379625 76381077 + 0.593030278887159 NA promoter-TSS (NM_175457) promoter-TSS (NM_175457) -162 NM_175457 223658 Mm.123240 NM_175457 ENSMUSG00000022558 Mroh1 D330001F17Rik|Heatr7a maestro heat-like repeat family member 1 protein-coding common_peak1_65_413_0.110445301347912_8.74870960817328_0.592992371288773 chr11 109417702 109418412 + 0.592992371288773 NA Intergenic Intergenic -7889 NM_025275 13929 Mm.211850 NM_025275 ENSMUSG00000020610 Amz2 AA408420|ESTM12|X83328 archaelysin family metallopeptidase 2 protein-coding common_peak1_56_342_0.12243395337736_8.48328174286149_0.592979543476454 chr19 61227380 61228092 + 0.592979543476454 NA intron (NM_009970, intron 1 of 11) CpG-7695 682 NM_009970 12982 Mm.287228 NM_009970 ENSMUSG00000059326 Csf2ra CD116|Csfgmra|GM-CSF-Ra|GM-CSFR colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) protein-coding common_peak2_142_1099_0.0689025381704056_10.1377390774972_0.592612624187212 chr6 86599174 86602378 + 0.592612624187212 NA Intergenic RSINE1|SINE|B4 -27398 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak1_78_519_0.099731278084862_9.07223345207089_0.592503813745465-2 chr8 94857412 94858201 + 0.592503813745465 NA intron (NM_009090, intron 2 of 8) CpG-14378 356 NM_009090 20021 Mm.292492 NM_009090 ENSMUSG00000031783 Polr2c 33kDa|RPB3|Rpo2-3|mRBP31 polymerase (RNA) II (DNA directed) polypeptide C protein-coding common_peak1_78_519_0.099731278084862_9.07223345207089_0.592503813745465 chr12 111537225 111537995 + 0.592503813745465 NA promoter-TSS (NM_178041) promoter-TSS (NM_178041) -491 NM_178041 217869 Mm.271222 NM_173363 ENSMUSG00000021282 Eif5 2810011H21Rik|D12Ertd549e eukaryotic translation initiation factor 5 protein-coding common_peak2_345_3316_0.0401595458908854_11.7157430697335_0.592366251915593 chr8 81011974 81016300 + 0.592366251915593 NA exon (NM_027554, exon 1 of 10) exon (NM_027554, exon 1 of 10) 769 NM_027554 74841 Mm.246018 NM_027554 ENSMUSG00000038250 Usp38 4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891 ubiquitin specific peptidase 38 protein-coding common_peak1_61_448_-0.117277118820484_8.7519330753309_0.592314612334026 chr17 32321330 32321919 + 0.592314612334026 NA promoter-TSS (NM_019774) promoter-TSS (NM_019774) -386 NR_131218 56399 Mm.328945 NM_019774 ENSMUSG00000024045 Akap8 1200016A02Rik|AA673585|AKAP-8|AKAP95|AU015639 A kinase (PRKA) anchor protein 8 protein-coding common_peak1_61_448_-0.117277118820484_8.7519330753309_0.592314612334026-2 chr4 95192829 95193889 + 0.592314612334026 NA Intergenic Intergenic -141137 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_59_366_0.115632490940847_8.57745249831364_0.592160670800431 chr3 86998644 87000064 + 0.592160670800431 NA promoter-TSS (NM_007639) promoter-TSS (NM_007639) -14 NM_007639 12479 Mm.1894 NM_007639 ENSMUSG00000028076 Cd1d1 AI747460|CD1.1|Cd1a|Cd1d|Ly-38 CD1d1 antigen protein-coding common_peak1_37_203_0.154551172611751_7.74970092827737_0.592057511174974 chr4 40779243 40780166 + 0.592057511174974 NA Intergenic Intergenic -21819 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding common_peak2_37_203_0.154551172611751_7.74970092827737_0.592057511174974 chr17 44653276 44654633 + 0.592057511174974 NA intron (NM_001271631, intron 2 of 4) intron (NM_001271631, intron 2 of 4) 82222 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding common_peak1_58_423_-0.122394049521374_8.66672342980251_0.591975042480962-2 chr6 86609543 86610417 + 0.591975042480962 NA Intergenic B1F2|SINE|Alu -18194 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak1_58_423_-0.122394049521374_8.66672342980251_0.591975042480962 chr14 27381073 27382106 + 0.591975042480962 NA intron (NM_001289688, intron 3 of 9) URR1A|DNA|hAT-Charlie 20200 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_122_909_0.0758550461326521_9.86765025815238_0.591679323283797 chr4 133056936 133058492 + 0.591679323283797 NA intron (NM_146155, intron 3 of 6) intron (NM_146155, intron 3 of 6) 46208 NM_146155 230793 Mm.31816 NM_146155 ENSMUSG00000037692 Ahdc1 D030015G18Rik AT hook, DNA binding motif, containing 1 protein-coding common_peak2_122_909_0.0758550461326521_9.86765025815238_0.591679323283797 chr6 39419152 39420859 + 0.591679323283797 NA promoter-TSS (NM_001311109) promoter-TSS (NM_001311109) -229 NM_001311109 54484 Mm.270484 NM_018810 ENSMUSG00000029922 Mkrn1 RFP makorin, ring finger protein, 1 protein-coding common_peak1_44_307_-0.14060790313027_8.19648258912977_0.591658452985591 chr5 118404721 118405281 + 0.591658452985591 NA Intergenic MTC|LTR|ERVL-MaLR -155718 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak2_44_307_-0.14060790313027_8.19648258912977_0.591658452985591 chr12 93928495 93929445 + 0.591658452985591 NA Intergenic Intergenic 1632 NR_106201 102466888 NR_106201 ENSMUSG00000098931 Mir8099-2 Gm27692|mmu-mir-8099-2 microRNA 8099-2 ncRNA common_peak1_29_192_-0.183800604670378_7.50055673493289_0.591538438407297 chr17 47357265 47357553 + 0.591538438407297 NA intron (NM_001097623, intron 19 of 19) (GAATG)n|Simple_repeat|Simple_repeat -11478 NM_001146212 64657 Mm.216250 NM_183086 ENSMUSG00000034729 Mrps10 1110038B19Rik|AW743084|Rpms10 mitochondrial ribosomal protein S10 protein-coding common_peak1_29_192_-0.183800604670378_7.50055673493289_0.591538438407297-2 chr5 113975450 113976109 + 0.591538438407297 NA intron (NM_198109, intron 2 of 14) intron (NM_198109, intron 2 of 14) 17978 NM_198109 231637 Mm.389682 NM_198109 ENSMUSG00000042121 Ssh1 AW551225|Gm1394|Gm1395|SSH-1|SSH-1L slingshot homolog 1 (Drosophila) protein-coding common_peak2_98_780_-0.0877242743278153_9.56531660097807_0.591319001992574 chr10 93082493 93084457 + 0.591319001992574 NA Intergenic Intergenic -77401 NM_146239 237459 Mm.217404 NM_146239 ENSMUSG00000020015 Cdk17 6430598J10Rik|Pctk2 cyclin-dependent kinase 17 protein-coding common_peak2_92_639_0.0888886260002284_9.36637240788748_0.591266656221383 chr15 86050382 86052815 + 0.591266656221383 NA Intergenic Intergenic -6097 NM_172611 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_113_923_-0.080638010679527_9.8114300360763_0.591199808396731 chr6 65599236 65600698 + 0.591199808396731 NA intron (NM_001001495, intron 5 of 7) intron (NM_001001495, intron 5 of 7) 9569 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak1_125_1040_-0.0755328821612782_9.98598791221878_0.590591384414021 chr13 42050515 42051634 + 0.590591384414021 NA promoter-TSS (NM_007772) promoter-TSS (NM_007772) -947 NM_007772 110521 Mm.4808 NM_007772 ENSMUSG00000021366 Hivep1 Cryabp1 human immunodeficiency virus type I enhancer binding protein 1 protein-coding common_peak2_84_651_-0.0970863063785856_9.30018500104178_0.590553273748774 chr14 31829661 31831367 + 0.590553273748774 NA promoter-TSS (NM_001024604) promoter-TSS (NM_001024604) -99 NM_001024604 105522 Mm.37660 NM_001024604 ENSMUSG00000014496 Ankrd28 AI465466|AI604979|E430019N21Rik|mKIAA0379 ankyrin repeat domain 28 protein-coding common_peak2_84_651_-0.0970863063785856_9.30018500104178_0.590553273748774-2 chr2 105016212 105017516 + 0.590553273748774 NA intron (NM_145380, intron 1 of 10) CpG 163 NM_145380 98221 Mm.379278 NM_145380 ENSMUSG00000027170 Eif3m Ga17|Pcid1|Tango7 eukaryotic translation initiation factor 3, subunit M protein-coding common_peak1_45_260_0.13716711870998_8.09648955592488_0.590544954543649 chr19 29323082 29323856 + 0.590544954543649 NA intron (NM_013754, intron 1 of 1) polypurine|Low_complexity|Low_complexity 1849 NM_013754 27356 Mm.306511 NM_013754 ENSMUSG00000050957 Insl6 RIF1 insulin-like 6 protein-coding common_peak1_192_1601_0.0571468600375482_10.6742318624275_0.590490733924245 chr2 30441196 30442938 + 0.590490733924245 NA intron (NM_138748, intron 8 of 9) intron (NM_138748, intron 8 of 9) 26017 NM_138748 110854 Mm.275393 NM_138748 ENSMUSG00000039515 Ptpa 2610042B21Rik|C77440|N28142|PR53|Ppp2r4 protein phosphatase 2 protein activator protein-coding common_peak1_339_3433_-0.0408078537769292_11.7252703971137_0.590472936414722 chr1 170971242 170974791 + 0.590472936414722 NA intron (NM_001077189, intron 1 of 7) intron (NM_001077189, intron 1 of 7) 3055 NM_001077189 14130 Mm.425062 NM_010187 ENSMUSG00000026656 Fcgr2b AI528646|CD32|F630109E10Rik|Fc[g]RII|FcgRII|Fcgr2|Fcgr2a|Fcr-2|Fcr-3|Ly-17|Ly-m20|LyM-1|Lym-1|fcRII Fc receptor, IgG, low affinity IIb protein-coding common_peak1_183_1508_0.0589206471258965_10.5888374140896_0.589828409988978 chr7 30587815 30590018 + 0.589828409988978 NA promoter-TSS (NM_029274) promoter-TSS (NM_029274) -190 NM_029274 75410 Mm.168688 NM_029274 ENSMUSG00000006307 Kmt2b 2610014H22Rik|Mll2|Wbp7|mKIAA0304 lysine (K)-specific methyltransferase 2B protein-coding common_peak1_96_674_0.0865946714252157_9.4420410276508_0.589721023943415 chr1 144300886 144302499 + 0.589721023943415 NA Intergenic L2c|LINE|L2 -52588 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak1_168_1478_-0.062592488569658_10.4991100928142_0.58948122499503 chr3 142529752 142531294 + 0.58948122499503 NA intron (NM_001083312, intron 1 of 10) intron (NM_001083312, intron 1 of 10) 187 NM_145545 229900 Mm.45740 NM_145545 ENSMUSG00000040253 Gbp7 9830147J24Rik guanylate binding protein 7 protein-coding common_peak2_72_470_0.102735776772844_8.93095113799921_0.589438471744009 chr2 3284045 3285243 + 0.589438471744009 NA intron (NM_008708, intron 1 of 13) CpG 432 NM_001290370 18108 Mm.65021 NM_008708 ENSMUSG00000026643 Nmt2 A930001K02Rik|AI605445|AU044698|hNMT-2 N-myristoyltransferase 2 protein-coding common_peak2_72_470_0.102735776772844_8.93095113799921_0.589438471744009-2 chr6 116071829 116073545 + 0.589438471744009 NA intron (NM_177412, intron 3 of 5) intron (NM_177412, intron 3 of 5) -77682 NM_026376 67784 Mm.3085 NM_026376 ENSMUSG00000030123 Plxnd1 6230425C21Rik|b2b1863Clo|b2b553Clo plexin D1 protein-coding common_peak2_72_470_0.102735776772844_8.93095113799921_0.589438471744009-3 chr8 111056107 111057319 + 0.589438471744009 NA exon (NM_028274, exon 1 of 1) exon (NM_028274, exon 1 of 1) 374 NM_028274 72544 Mm.24174 NM_028274 ENSMUSG00000109941 Exosc6 2610510N21Rik|C76919|Mtr3 exosome component 6 protein-coding common_peak1_72_470_0.102735776772844_8.93095113799921_0.589438471744009 chr14 33446461 33447322 + 0.589438471744009 NA intron (NM_001310453, intron 1 of 11) CpG 267 NM_001310453 26419 Mm.21495 NM_016700 ENSMUSG00000021936 Mapk8 AI849689|JNK|JNK1|Prkm8|SAPK1 mitogen-activated protein kinase 8 protein-coding common_peak2_34_229_-0.164044336420841_7.76346788273395_0.589372477666204 chr8 81703612 81704452 + 0.589372477666204 NA intron (NM_001297591, intron 2 of 24) intron (NM_001297591, intron 2 of 24) 361470 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding common_peak2_89_613_0.0906961033808091_9.30744289706058_0.589181728467153 chr4 117133199 117134720 + 0.589181728467153 NA promoter-TSS (NM_001313916) promoter-TSS (NM_001313916) 4 NM_013807 12795 Mm.259022 NM_013807 ENSMUSG00000028680 Plk3 Cnk|Fnk|PLK-3|PRK polo-like kinase 3 protein-coding common_peak1_81_623_-0.0973466426104661_9.23672889755701_0.5891720478086 chr10 20864570 20865330 + 0.5891720478086 NA Intergenic MT2A|LTR|ERVL -87597 NM_026203 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak2_81_623_-0.0973466426104661_9.23672889755701_0.5891720478086 chr2 153349705 153352045 + 0.5891720478086 NA intron (NM_001039939, intron 1 of 11) intron (NM_001039939, intron 1 of 11) 4736 NM_001039939 228790 Mm.330677 NM_001039939 ENSMUSG00000042548 Asxl1 mKIAA0978 additional sex combs like 1 protein-coding common_peak1_13_81_-0.297599565786514_6.20875222172483_0.589033785605532-2 chr18 80525774 80526227 + 0.589033785605532 NA Intergenic Intergenic 18546 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_13_81_-0.297599565786514_6.20875222172483_0.589033785605532-4 chr6 129661769 129662159 + 0.589033785605532 NA Intergenic Lx7|LINE|L1 -1368 NM_001098669 16642 Mm.347927 NM_010653 ENSMUSG00000052736 Klrc2 NKG2C killer cell lectin-like receptor subfamily C, member 2 protein-coding common_peak1_13_81_-0.297599565786514_6.20875222172483_0.589033785605532-3 chr3 131272232 131272640 + 0.589033785605532 NA promoter-TSS (NM_008212) promoter-TSS (NM_008212) -335 NM_008212 15107 Mm.260164 NM_008212 ENSMUSG00000027984 Hadh AA409008|AU019341|AW742602|HCDH|Hadhsc|Schad hydroxyacyl-Coenzyme A dehydrogenase protein-coding common_peak1_13_81_-0.297599565786514_6.20875222172483_0.589033785605532 chr10 81139972 81140364 + 0.589033785605532 NA intron (NM_010731, intron 1 of 2) MIR3|SINE|MIR 3897 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak2_39_268_-0.153715823739491_7.99460445068688_0.588981341326645 chr10 68445553 68446927 + 0.588981341326645 NA intron (NM_028491, intron 5 of 7) intron (NM_028491, intron 5 of 7) 95635 NM_028491 73287 Mm.141830 NM_028491 ENSMUSG00000019945 1700040L02Rik - RIKEN cDNA 1700040L02 gene protein-coding unique_peak2_30_156_0.172061455842679_7.38065147681297_0.588794283501 chr15 99294302 99295482 + 0.588794283501 NA promoter-TSS (NM_018786) promoter-TSS (NM_018786) -517 NM_018786 54614 Mm.358668 NM_018786 ENSMUSG00000023007 Prpf40b 2610317D23Rik|Hypc pre-mRNA processing factor 40B protein-coding common_peak1_27_177_-0.189168680948472_7.38114909049216_0.588794283501 chr1 173419179 173419832 + 0.588794283501 NA Intergenic Intergenic -1099 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_30_156_0.172061455842679_7.38065147681297_0.588794283501-2 chr3 137817570 137818306 + 0.588794283501 NA Intergenic Intergenic -46549 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak1_30_156_0.172061455842679_7.38065147681297_0.588794283501-3 chr9 108148549 108149133 + 0.588794283501 NA intron (NM_007567, intron 1 of 11) intron (NM_007567, intron 1 of 11) 11986 NR_126077 76873 Mm.436935 NR_126077 ENSMUSG00000102224 4930447F24Rik - RIKEN cDNA 4930447F24 gene ncRNA common_peak1_30_156_0.172061455842679_7.38065147681297_0.588794283501 chr11 68437874 68438386 + 0.588794283501 NA intron (NM_177320, intron 1 of 18) ORR1F|LTR|ERVL-MaLR 6005 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak1_48_282_0.132217994078802_8.21076723987128_0.588710683456869 chr12 70074412 70075226 + 0.588710683456869 NA intron (NM_001286080, intron 5 of 29) intron (NM_001286080, intron 5 of 29) 28035 NM_001081453 18080 Mm.244047 NM_008697 ENSMUSG00000021068 Nin 3110068G20Rik|AI385615|AU024711|mKIAA1565 ninein protein-coding unique_peak2_48_282_0.132217994078802_8.21076723987128_0.588710683456869 chr13 95687495 95689424 + 0.588710683456869 NA intron (NM_027711, intron 14 of 35) ERVL-B4-int|LTR|ERVL -8461 NM_010170 14064 Mm.440952 NM_010170 ENSMUSG00000021675 F2rl2 F730031A08|PAR3 coagulation factor II (thrombin) receptor-like 2 protein-coding common_peak2_69_445_0.107158125789585_8.8544789628151_0.588672028037931 chr6 22358016 22359926 + 0.588672028037931 NA Intergenic Intergenic -2890 NM_138587 27999 Mm.490307 NM_138587 ENSMUSG00000029672 Fam3c D6Wsu176e|Ilei family with sequence similarity 3, member C protein-coding common_peak1_248_2201_0.0490416317572624_11.129119569443_0.588489119536359 chr15 86064050 86067470 + 0.588489119536359 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 7033 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak2_114_932_-0.0791668798799297_9.8261498309118_0.588321388275223 chr1 193172617 193174598 + 0.588321388275223 NA promoter-TSS (NM_181048) promoter-TSS (NM_181048) 30 NM_181048 319266 Mm.482460 NM_181048 ENSMUSG00000079144 A130010J15Rik - RIKEN cDNA A130010J15 gene protein-coding common_peak1_50_356_-0.132109486901642_8.41372552057828_0.587680423271955 chr7 109587574 109588732 + 0.587680423271955 NA intron (NM_029811, intron 1 of 18) intron (NM_029811, intron 1 of 18) 28415 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding common_peak2_50_356_-0.132109486901642_8.41372552057828_0.587680423271955 chr3 20103817 20105545 + 0.587680423271955 NA intron (NM_009210, intron 18 of 24) intron (NM_009210, intron 18 of 24) 46390 NR_105047 20585 Mm.209650 NM_009210 ENSMUSG00000002428 Hltf AF010600|BC057116|P113|Smarca3|Snf2l3 helicase-like transcription factor protein-coding common_peak2_66_421_0.109444511442538_8.77582144442846_0.587657019874978 chr7 28049236 28050127 + 0.587657019874978 NA intron (NM_011874, intron 1 of 10) intron (NM_011874, intron 1 of 10) 411 NM_011874 23996 Mm.29582 NM_011874 ENSMUSG00000030603 Psmc4 CIP21|MIP224 proteasome (prosome, macropain) 26S subunit, ATPase, 4 protein-coding unique_peak2_35_189_0.161442064728075_7.65057664069499_0.587648341865704 chr4 137882992 137884406 + 0.587648341865704 NA intron (NM_199307, intron 1 of 19) intron (NM_199307, intron 1 of 19) 21462 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding common_peak2_35_189_0.161442064728075_7.65057664069499_0.587648341865704 chr8 70476219 70477176 + 0.587648341865704 NA intron (NM_178771, intron 1 of 2) CpG 246 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak1_35_189_0.161442064728075_7.65057664069499_0.587648341865704 chr11 74559021 74559738 + 0.587648341865704 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 30779 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_35_189_0.161442064728075_7.65057664069499_0.587648341865704-2 chr15 59760930 59761646 + 0.587648341865704 NA Intergenic Intergenic 33671 NR_045076 100503021 Mm.402924 NR_045076 Gm19510 - predicted gene, 19510 ncRNA common_peak1_160_1394_-0.0640524933575719_10.4140231600378_0.587611046090505 chr2 119112209 119113484 + 0.587611046090505 NA promoter-TSS (NM_011234) promoter-TSS (NM_011234) 29 NM_011234 19361 Mm.330492 NM_011234 ENSMUSG00000027323 Rad51 AV304093|Rad51a|Reca RAD51 recombinase protein-coding common_peak2_78_596_-0.0994880301514893_9.17184310618906_0.587538202394225 chr2 32281364 32283503 + 0.587538202394225 NA intron (NM_001290552, intron 2 of 4) intron (NM_001290552, intron 2 of 4) 5636 NR_110965 72931 Mm.27344 NM_175190 ENSMUSG00000044627 Swi5 1500019F05Rik|2900010J23Rik|AI046671 SWI5 recombination repair homolog (yeast) protein-coding common_peak1_104_745_0.0825484104215821_9.58430602546603_0.587535643531734 chr19 61226084 61227377 + 0.587535643531734 NA intron (NM_009970, intron 4 of 11) CpG-7695 1688 NM_009970 12982 Mm.287228 NM_009970 ENSMUSG00000059326 Csf2ra CD116|Csfgmra|GM-CSF-Ra|GM-CSFR colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) protein-coding common_peak2_65_482_-0.111947119988537_8.8599058188415_0.587432938510599 chr16 43689725 43691379 + 0.587432938510599 NA Intergenic Intergenic -26368 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak2_140_1080_0.0691147958446532_10.112708205657_0.587057163587986 chr13 34077357 34079496 + 0.587057163587986 NA promoter-TSS (NM_009450) promoter-TSS (NM_009450) -418 NM_009450 22151 Mm.422827 NM_009450 ENSMUSG00000058672 Tubb2a M(beta)2|Tubb2 tubulin, beta 2A class IIA protein-coding common_peak2_51_305_0.124645713134637_8.31971069925997_0.586919777562399 chr4 44044155 44045782 + 0.586919777562399 NA exon (NM_015828, exon 7 of 12) exon (NM_015828, exon 7 of 12) 27705 NM_001190414 50798 Mm.256718 NM_015828 ENSMUSG00000028479 Gne 2310066H07Rik|DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding common_peak1_56_405_-0.120837197635003_8.60491731836768_0.586918830844681-2 chr4 48039265 48040387 + 0.586918830844681 NA Intergenic Intergenic -5479 NM_015743 18124 Mm.247261 NM_015743 ENSMUSG00000028341 Nr4a3 AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC nuclear receptor subfamily 4, group A, member 3 protein-coding common_peak1_56_405_-0.120837197635003_8.60491731836768_0.586918830844681 chr1 97769239 97770087 + 0.586918830844681 NA promoter-TSS (NM_026250) promoter-TSS (NM_026250) 429 NM_173760 227399 Mm.220817 NM_173760 ENSMUSG00000040648 Ppip5k2 AW555814|Cfap160|D330021B20|Hisppd1|Vip2|mKIAA0433 diphosphoinositol pentakisphosphate kinase 2 protein-coding common_peak1_75_569_-0.101229283282501_9.10420346741085_0.586141825051346 chr6 83348926 83349964 + 0.586141825051346 NA promoter-TSS (NM_175277) promoter-TSS (NM_175277) -39 NM_175277 78653 Mm.391470 NM_175277 ENSMUSG00000045160 Bola3 1810056O20Rik bolA-like 3 (E. coli) protein-coding common_peak2_97_683_0.0856360332111432_9.46067053149147_0.586031837884999 chr2 30463244 30465126 + 0.586031837884999 NA Intergenic MLT1I|LTR|ERVL-MaLR 10014 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak1_116_854_0.0772973559878842_9.7784292877672_0.585978495789654 chr4 136601849 136602807 + 0.585978495789654 NA exon (NM_133872, exon 1 of 19) exon (NM_133872, exon 1 of 19) 395 NM_133872 99982 Mm.28540 NM_133872 ENSMUSG00000036940 Kdm1a 1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601 lysine (K)-specific demethylase 1A protein-coding common_peak1_198_1799_-0.0567993973696197_10.7853814925322_0.585492021455897 chr14 56777191 56779287 + 0.585492021455897 NA promoter-TSS (NM_025682) promoter-TSS (NM_025682) 77 NM_025682 66645 Mm.20129 NM_025682 ENSMUSG00000021938 Pspc1 5730470C09Rik|AI327109|AI449052|PSP1 paraspeckle protein 1 protein-coding common_peak1_334_3186_0.040665983250193_11.6583162954029_0.585373483266398 chr9 45245015 45248781 + 0.585373483266398 NA intron (NM_001198971, intron 4 of 4) intron (NM_001198971, intron 4 of 4) 19809 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak2_161_1405_-0.0644264848932998_10.4251676366259_0.585318032318303 chr4 8646569 8648545 + 0.585318032318303 NA Intergenic CpG -42849 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_115_942_-0.0792260237898148_9.84150094878019_0.585189398253964 chr17 34898689 34900268 + 0.585189398253964 NA exon (NM_147151, exon 3 of 27) exon (NM_147151, exon 3 of 27) 504 NM_145830 110147 Mm.35345 NM_145830 ENSMUSG00000013787 Ehmt2 Bat8|D17Ertd710e|G9a|KMT1C|NG36 euchromatic histone lysine N-methyltransferase 2 protein-coding common_peak2_90_622_0.0892566896960449_9.32771669787202_0.585143981435411 chr13 104609777 104611644 + 0.585143981435411 NA Intergenic Intergenic 206243 NM_026072 67285 Mm.235398 NM_026072 ENSMUSG00000021715 Cwc27 3110009E13Rik|NY-CO-10|Sdccag10 CWC27 spliceosome-associated protein protein-coding unique_peak2_25_163_-0.202130759977152_7.25648662462951_0.585085040827714 chr13 35797306 35798231 + 0.585085040827714 NA intron (NM_009881, intron 4 of 9) intron (NM_009881, intron 4 of 9) 56366 NM_001123386 12593 Mm.29002 NM_009881 ENSMUSG00000059288 Cdyl AI325931 chromodomain protein, Y chromosome-like protein-coding common_peak2_28_143_0.178738313070256_7.25929415797744_0.585085040827714 chr4 59034811 59035816 + 0.585085040827714 NA exon (NM_025277, exon 1 of 3) exon (NM_025277, exon 1 of 3) 157 NM_025277 14700 Mm.41780 NM_025277 ENSMUSG00000038607 Gng10 AV006524 guanine nucleotide binding protein (G protein), gamma 10 protein-coding common_peak2_32_214_-0.170872901928581_7.66275639862517_0.584814478678446 chr9 65675938 65677137 + 0.584814478678446 NA promoter-TSS (NM_010952) promoter-TSS (NM_010952) -11 NM_010952 18247 Mm.116749 NM_010952 ENSMUSG00000040652 Oaz2 AZ-2|AZ2|Oaz2-ps|Sez15 ornithine decarboxylase antizyme 2 protein-coding common_peak1_73_478_0.102514116661586_8.95513890406697_0.58478466155298 chr18 62156693 62157619 + 0.58478466155298 NA Intergenic G-rich|Low_complexity|Low_complexity 22825 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak2_100_798_-0.0852034993225192_9.59944994326672_0.584579238607026 chr1 105971316 105972733 + 0.584579238607026 NA Intergenic Intergenic -18382 NM_001122676 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding common_peak1_43_246_0.138042822295629_8.01738864273249_0.584530446308872-2 chr6 117716353 117717123 + 0.584530446308872 NA intron (NR_045731, intron 2 of 3) RLTR45-int|LTR|ERVK 35031 NR_045731 72263 Mm.443289 NR_045731 ENSMUSG00000099869 1700030F04Rik - RIKEN cDNA 1700030F04 gene ncRNA common_peak1_43_246_0.138042822295629_8.01738864273249_0.584530446308872 chr2 34406832 34407460 + 0.584530446308872 NA 5' UTR (NM_177345, exon 1 of 12) 5' UTR (NM_177345, exon 1 of 12) 295 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding unique_peak2_37_252_-0.156017060111064_7.90498504463878_0.584492852923417 chr7 81074506 81076138 + 0.584492852923417 NA intron (NM_054085, intron 3 of 13) L2a|LINE|L2 17722 NM_054085 116904 Mm.475768 NM_054085 ENSMUSG00000038763 Alpk3 AW319487|D330016D04|MAK|Midori|mKIAA1330 alpha-kinase 3 protein-coding common_peak1_37_252_-0.156017060111064_7.90498504463878_0.584492852923417 chr5 139484627 139485107 + 0.584492852923417 NA promoter-TSS (NM_001159908) promoter-TSS (NM_001159908) -376 NM_001159908 100494 Mm.24521 NM_133349 ENSMUSG00000053581 Zfand2a AA407930|AU016206|Airap zinc finger, AN1-type domain 2A protein-coding common_peak2_72_543_-0.105143814864711_9.03489093381798_0.584477319820139 chr13 37433733 37435122 + 0.584477319820139 NA Intergenic Intergenic 89082 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding common_peak1_157_1363_-0.0649165267245007_10.3811696656619_0.584476269518481 chr15 101283939 101284907 + 0.584476269518481 NA 5' UTR (NM_026566, exon 1 of 3) 5' UTR (NM_026566, exon 1 of 3) 122 NM_026566 68118 Mm.482360 NM_026566 ENSMUSG00000037204 Atg101 9430023L20Rik|AA407441|AU022967 autophagy related 101 protein-coding unique_peak2_23_148_-0.205393052370066_7.11647199427713_0.584249270791306 chrX 50619645 50620779 + 0.584249270791306 NA intron (NR_015505, intron 3 of 19) intron (NR_015505, intron 3 of 19) 15109 NR_015505 103012 Mm.482523 NR_015505 ENSMUSG00000085396 Firre 5830467J12Rik|6720401G13Rik|AW048145 functional intergenic repeating RNA element ncRNA common_peak1_15_94_-0.27360234520578_6.43305443572806_0.583801854567669-2 chrX 164015878 164016279 + 0.583801854567669 NA intron (NM_181315, intron 1 of 7) intron (NM_181315, intron 1 of 7) 11932 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak1_15_94_-0.27360234520578_6.43305443572806_0.583801854567669 chr5 121593525 121593989 + 0.583801854567669 NA promoter-TSS (NM_009656) promoter-TSS (NM_009656) 67 NM_009656 11669 Mm.284446 NM_009656 ENSMUSG00000029455 Aldh2 AHD-M1|ALDH-E2|ALDHI|Ahd-5|Ahd5 aldehyde dehydrogenase 2, mitochondrial protein-coding common_peak1_246_2180_0.0485950638309731_11.1150715865562_0.583785592912805 chr17 47009569 47011192 + 0.583785592912805 NA 5' UTR (NM_001177374, exon 1 of 47) 5' UTR (NM_001177374, exon 1 of 47) 152 NM_146078 224826 Mm.28234 NM_146078 ENSMUSG00000023977 Ubr2 9930021A08Rik|AI462103|AW540746|E130209G04Rik|ENSMUSG00000043296|mKIAA0349 ubiquitin protein ligase E3 component n-recognin 2 protein-coding common_peak1_109_790_0.0803694450994801_9.66771860702253_0.583652918175444 chr14 66239986 66242186 + 0.583652918175444 NA intron (NM_172498, intron 1 of 29) MIR|SINE|MIR -27534 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_136_1149_-0.0710805892968782_10.1318778511833_0.583232527573715 chr7 45813577 45814406 + 0.583232527573715 NA intron (NM_011181, intron 1 of 11) CpG 325 NM_011181 19158 Mm.272130 NM_011181 ENSMUSG00000003269 Cyth2 ARNO|CLM2|Pscd2 cytohesin 2 protein-coding common_peak2_108_874_-0.0813969711900544_9.73244072112466_0.583063687540473 chr16 32098744 32100568 + 0.583063687540473 NA promoter-TSS (NM_001111025) promoter-TSS (NM_001111025) 71 NM_001111025 72084 Mm.37613 NM_024464 ENSMUSG00000023791 Pigx 2010319C14Rik|PIG-X phosphatidylinositol glycan anchor biosynthesis, class X protein-coding common_peak1_86_668_-0.0930645699756081_9.33933011565366_0.582949314678229 chr11 115155323 115156142 + 0.582949314678229 NA intron (NM_021411, intron 1 of 8) intron (NM_021411, intron 1 of 8) 1554 NM_021411 58222 Mm.143789 NM_021411 ENSMUSG00000020732 Rab37 B230331O03Rik|B230354I04Rik RAB37, member RAS oncogene family protein-coding common_peak2_38_210_0.151844260900675_7.79702131915752_0.582871867676945 chr19 11408582 11409687 + 0.582871867676945 NA intron (NM_029499, intron 1 of 6) L1M2a|LINE|L1 1473 NM_029499 64380 Mm.440715 NM_029499 ENSMUSG00000024675 Ms4a4c 5830413L19Rik|AI449185|Ms4a9 membrane-spanning 4-domains, subfamily A, member 4C protein-coding common_peak1_38_210_0.151844260900675_7.79702131915752_0.582871867676945-2 chr8 35680099 35680963 + 0.582871867676945 NA Intergenic Intergenic -91511 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_38_210_0.151844260900675_7.79702131915752_0.582871867676945 chr13 21787501 21788169 + 0.582871867676945 NA promoter-TSS (NM_178184) promoter-TSS (NM_178184) 347 NM_001290466 319188 Mm.264645 NM_178202 ENSMUSG00000069308 Hist1h2bp - histone cluster 1, H2bp protein-coding common_peak2_117_864_0.075582393704094_9.79434751937614_0.58276883014691 chr16 17405113 17406817 + 0.58276883014691 NA promoter-TSS (NM_023348) promoter-TSS (NM_023348) -35 NM_023348 67474 Mm.271992 NM_023348 ENSMUSG00000022765 Snap29 1300018G05Rik|AI891940|AU020222|BB131856|Gs32 synaptosomal-associated protein 29 protein-coding common_peak2_121_901_0.0741481389779484_9.85405769274436_0.582732554608842 chr4 134533998 134535818 + 0.582732554608842 NA intron (NM_029759, intron 1 of 6) CpG 360 NM_001256112 76824 Mm.30153 NM_029759 ENSMUSG00000046671 Mtfr1l 2410166I05Rik|AI480750|Fam54b mitochondrial fission regulator 1-like protein-coding common_peak1_19_120_-0.227729009643818_6.80499873245269_0.582718239339643 chr17 31294820 31295265 + 0.582718239339643 NA promoter-TSS (NM_153062) promoter-TSS (NM_153062) -441 NM_153062 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak1_19_120_-0.227729009643818_6.80499873245269_0.582718239339643-3 chr5 62909130 62909664 + 0.582718239339643 NA Intergenic Intergenic 95574 NM_001170705 100322896 Mm.479821 NM_001170705 ENSMUSG00000090326 Dthd1 Gm17384 death domain containing 1 protein-coding common_peak1_19_120_-0.227729009643818_6.80499873245269_0.582718239339643-4 chr6 122275502 122276057 + 0.582718239339643 NA intron (NM_016970, intron 3 of 4) intron (NM_016970, intron 3 of 4) 7054 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak1_19_120_-0.227729009643818_6.80499873245269_0.582718239339643-5 chr6 129226934 129227348 + 0.582718239339643 NA Intergenic Intergenic 10904 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak1_19_120_-0.227729009643818_6.80499873245269_0.582718239339643-2 chr3 144401203 144401670 + 0.582718239339643 NA Intergenic Intergenic 168780 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding common_peak1_19_120_-0.227729009643818_6.80499873245269_0.582718239339643-6 chr8 126854137 126854492 + 0.582718239339643 NA Intergenic Intergenic 91607 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak2_21_134_-0.21701785435688_6.96830666987239_0.582696474856676-2 chr12 25439000 25439617 + 0.582696474856676 NA Intergenic Intergenic 310134 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_21_134_-0.21701785435688_6.96830666987239_0.582696474856676-2 chr5 148494838 148495390 + 0.582696474856676 NA Intergenic Intergenic 57674 NM_011908 24109 Mm.21846 NM_011908 ENSMUSG00000001687 Ubl3 AW108023|HCG ubiquitin-like 3 protein-coding common_peak2_21_134_-0.21701785435688_6.96830666987239_0.582696474856676 chr11 116580761 116581497 + 0.582696474856676 NA exon (NM_173755, exon 1 of 18) exon (NM_173755, exon 1 of 18) 318 NM_173755 217342 Mm.243950 NM_173755 ENSMUSG00000020802 Ube2o 9630022H21|B230113M03Rik|E2-230K|mKIAA1734 ubiquitin-conjugating enzyme E2O protein-coding common_peak1_21_134_-0.21701785435688_6.96830666987239_0.582696474856676 chr10 80758990 80759458 + 0.582696474856676 NA intron (NM_199322, intron 1 of 27) B1F|SINE|Alu 4018 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak2_21_134_-0.21701785435688_6.96830666987239_0.582696474856676-3 chr17 15714238 15715398 + 0.582696474856676 NA intron (NM_007690, intron 2 of 35) intron (NM_007690, intron 2 of 35) 9851 NM_007690 12648 Mm.8137 NM_007690 ENSMUSG00000023852 Chd1 4930525N21Rik|AI851787|AW555109 chromodomain helicase DNA binding protein 1 protein-coding unique_peak2_48_339_-0.132514699227018_8.34313358652419_0.582511737617394 chr6 149138489 149139907 + 0.582511737617394 NA Intergenic ORR1A4|LTR|ERVL-MaLR -2315 NM_001252096 320204 Mm.274099 NM_177101 ENSMUSG00000039958 Etfbkmt 4833442J19Rik|AI256744|ETFB-KMT|Mettl20 electron transfer flavoprotein beta subunit lysine methyltransferase protein-coding common_peak2_48_339_-0.132514699227018_8.34313358652419_0.582511737617394 chr16 76679541 76680912 + 0.582511737617394 NA Intergenic Intergenic -307177 NM_173440 268903 Mm.74711 NM_173440 ENSMUSG00000048490 Nrip1 6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140 nuclear receptor interacting protein 1 protein-coding common_peak1_48_339_-0.132514699227018_8.34313358652419_0.582511737617394 chrX 162759360 162760165 + 0.582511737617394 NA promoter-TSS (NM_009031) promoter-TSS (NM_009031) -610 NM_009031 245688 Mm.270186 NM_009031 ENSMUSG00000031353 Rbbp7 AA409861|AI173248|AU019541|BB114024|mRbAp46 retinoblastoma binding protein 7 protein-coding common_peak1_367_3582_0.0379577206281958_11.8259311885248_0.582423628162366 chr15 86058716 86062158 + 0.582423628162366 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 1710 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_195_1766_-0.0569854652682196_10.7585935919175_0.582367576228755 chr5 23386173 23387856 + 0.582367576228755 NA Intergenic Intergenic 47339 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak2_46_268_0.131668724869394_8.13729672499132_0.582310766450919 chr8 105880329 105881581 + 0.582310766450919 NA promoter-TSS (NM_181594) promoter-TSS (NM_181594) 74 NM_181594 234699 Mm.28979 NM_181594 ENSMUSG00000036270 Edc4 BC022641 enhancer of mRNA decapping 4 protein-coding common_peak2_26_130_0.188784565302145_7.12781528418852_0.58221586589868 chr16 5256070 5256656 + 0.58221586589868 NA promoter-TSS (NM_027446) promoter-TSS (NM_027446) -407 NM_027446 70511 Mm.45780 NM_027446 ENSMUSG00000022544 Eef2kmt 5730409G15Rik|Fam86|Fam86a|eEF2-KMT eukaryotic elongation factor 2 lysine methyltransferase protein-coding common_peak1_26_130_0.188784565302145_7.12781528418852_0.58221586589868 chr6 136555547 136556141 + 0.58221586589868 NA intron (NM_019426, intron 1 of 14) intron (NM_019426, intron 1 of 14) 36993 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_33_176_0.162543022077529_7.54887706112176_0.582206358086726 chr5 135912063 135912657 + 0.582206358086726 NA intron (NM_018871, intron 1 of 1) B1_Mur4|SINE|Alu 22281 NM_018871 22628 Mm.233813 NM_018871 ENSMUSG00000051391 Ywhag 14-3-3gamma|D7Bwg1348e tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide protein-coding common_peak2_187_1550_0.0573727387626413_10.6276693404174_0.582160135217474 chr3 158035801 158037349 + 0.582160135217474 NA promoter-TSS (NM_024194) promoter-TSS (NM_024194) 64 NM_001093752 69207 Mm.223946 NM_026989 ENSMUSG00000055436 Srsf11 0610009J05Rik|2610019N13Rik|BF642805|Sfrs11 serine/arginine-rich splicing factor 11 protein-coding common_peak1_17_107_-0.250202140290801_6.62978643201807_0.582092378886036-2 chr4 132732129 132732573 + 0.582092378886036 NA TTS (NM_133888) TTS (NM_133888) 195 NM_201368 381560 Mm.44558 NM_201368 ENSMUSG00000037752 Xkr8 4931440N07Rik|AI597014|Gm1031|XRG8|mXkr8 X-linked Kx blood group related 8 protein-coding unique_peak2_17_107_-0.250202140290801_6.62978643201807_0.582092378886036 chr2 152825151 152825869 + 0.582092378886036 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 5207 NM_001289716 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_17_107_-0.250202140290801_6.62978643201807_0.582092378886036-3 chr9 3335457 3335927 + 0.582092378886036 NA intron (NM_026303, intron 1 of 11) intron (NM_026303, intron 1 of 11) 461 NM_026303 67667 Mm.116968 NM_026303 ENSMUSG00000025899 Alkbh8 4930562C03Rik|8030431D03Rik|9430088N01Rik|Abh8 alkB homolog 8, tRNA methyltransferase protein-coding common_peak1_17_107_-0.250202140290801_6.62978643201807_0.582092378886036 chr16 52090390 52090772 + 0.582092378886036 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 59032 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak2_97_770_-0.0870985018179944_9.54703779900604_0.58208460150918 chr14 73524389 73525562 + 0.58208460150918 NA intron (NM_172527, intron 3 of 4) CpG 14926 NM_026119 67381 Mm.282888 NM_026119 ENSMUSG00000022109 Med4 2410046H15Rik|DRIP36|HSPC126|TRAP36|Vdirp|Vdrip mediator complex subunit 4 protein-coding common_peak2_145_1240_-0.0683560625583706_10.2431093688512_0.581984754359222 chr2 120976497 120978170 + 0.581984754359222 NA exon (NM_175285, exon 1 of 14) exon (NM_175285, exon 1 of 14) 271 NM_175285 96957 Mm.315212 NM_175285 ENSMUSG00000054484 Tmem62 B830009D23Rik|C77355 transmembrane protein 62 protein-coding common_peak2_154_1332_-0.0656732734763459_10.3476244283508_0.581361399079931 chr7 43464423 43466764 + 0.581361399079931 NA intron (NM_001290316, intron 4 of 9) intron (NM_001290316, intron 4 of 9) 2360 NM_001290316 75690 Mm.30200 NM_001290316 ENSMUSG00000070604 Vsig10l - V-set and immunoglobulin domain containing 10 like protein-coding common_peak1_40_275_-0.147081191712743_8.0349838609218_0.58128157427806 chr5 124862769 124863691 + 0.58128157427806 NA intron (NM_001081750, intron 1 of 3) CpG-11549 525 NM_001081750 269704 Mm.138617 NM_001081750 ENSMUSG00000079215 Zfp664 AW060232|D930038J03Rik|ZFOC1|Znf664 zinc finger protein 664 protein-coding common_peak1_77_512_0.096740745187164_9.05118538820064_0.581270198551558 chr5 34525876 34527149 + 0.581270198551558 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) 728 NM_011893 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak1_202_1706_0.0549520807503008_10.7647233834029_0.58123529276612 chr5 137600143 137601845 + 0.58123529276612 NA promoter-TSS (NM_030037) promoter-TSS (NM_030037) 65 NM_030037 68929 Mm.41355 NM_030037 ENSMUSG00000037221 Mospd3 1190005J19Rik|5133401H10Rik|Gtig2|R124 motile sperm domain containing 3 protein-coding common_peak2_49_290_0.127752160414458_8.24875142311551_0.581134707288617 chr2 146422784 146424472 + 0.581134707288617 NA intron (NM_001033348, intron 15 of 40) MLT1H|LTR|ERVL-MaLR 88376 NM_001033348 241694 Mm.222310 NM_001033348 ENSMUSG00000037110 Ralgapa2 A230067G21Rik|AS250|BC053994|RGC2|pp250 Ral GTPase activating protein, alpha subunit 2 (catalytic) protein-coding common_peak1_264_2380_0.0464954470511003_11.2405996287959_0.581103593042344 chr7 127966711 127968649 + 0.581103593042344 NA intron (NM_139149, intron 1 of 14) CpG 201 NM_139149 233908 Mm.277680 NM_139149 ENSMUSG00000030795 Fus D430004D17Rik|D930039C12Rik|Fus1|Tls fused in sarcoma protein-coding common_peak1_106_763_0.0815415913200255_9.61819962369576_0.580968451419522 chr10 63338133 63339608 + 0.580968451419522 NA exon (NM_001159589, exon 1 of 8) exon (NM_001159589, exon 1 of 8) 165 NM_019812 93759 Mm.351459 NM_019812 ENSMUSG00000020063 Sirt1 AA673258|SIR2L1|Sir2|Sir2a|Sir2alpha sirtuin 1 protein-coding common_peak1_64_406_0.108029536066649_8.72289975229957_0.580951287870195 chr14 18270236 18270986 + 0.580951287870195 NA promoter-TSS (NM_001316711) promoter-TSS (NM_001316711) 375 NM_025586 66480 Mm.2050 NM_025586 ENSMUSG00000012405 Rpl15 2510008H07Rik ribosomal protein L15 protein-coding common_peak1_134_1023_0.0703131537179154_10.035156576859_0.580928123614728 chr17 71214557 71216890 + 0.580928123614728 NA intron (NM_022882, intron 2 of 19) ID_B1|SINE|B4 11069 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding unique_peak2_10_62_-0.344094491992321_5.80523267750376_0.58075593666224 chr11 120343946 120344518 + 0.58075593666224 NA Intergenic B1_Mur4|SINE|Alu 3181 NR_105900 102465564 NR_105900 ENSMUSG00000098955 Mir6935 Gm27344|mmu-mir-6935 microRNA 6935 ncRNA unique_peak2_30_199_-0.177173985040418_7.55526919725452_0.58070902409177 chr16 24165257 24166444 + 0.58070902409177 NA Intergenic Intergenic -177238 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding common_peak1_30_199_-0.177173985040418_7.55526919725452_0.58070902409177 chr6 31077390 31078075 + 0.58070902409177 NA Intergenic Intergenic -14639 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_133_1118_-0.0708383096403136_10.0925751661562_0.580474126552651 chr8 107095438 107096750 + 0.580474126552651 NA promoter-TSS (NR_106043) promoter-TSS (NR_106043) 12 NR_106043 102465652 NR_106043 ENSMUSG00000098671 Mir7075 Gm27821|mmu-mir-7075 microRNA 7075 ncRNA common_peak1_61_382_0.112093933995705_8.63724754892281_0.580450481333081 chr10 94147700 94148664 + 0.580450481333081 NA intron (NM_011629, intron 1 of 13) CpG 251 NM_011629 22025 Mm.107483 NM_011629 ENSMUSG00000005897 Nr2c1 4831444H07Rik|80.3|Eenr|TR2|Tr2-11 nuclear receptor subfamily 2, group C, member 1 protein-coding common_peak1_35_236_-0.157445575839236_7.81002046097864_0.580352999799549-2 chr14 75445673 75446258 + 0.580352999799549 NA Intergenic Intergenic -10017 NM_001128093 380918 Mm.484360 NM_001128093 ENSMUSG00000091722 Siah3 Gm912 seven in absentia homolog 3 (Drosophila) protein-coding unique_peak2_35_236_-0.157445575839236_7.81002046097864_0.580352999799549 chr4 59210998 59213077 + 0.580352999799549 NA intron (NM_011673, intron 3 of 8) intron (NM_011673, intron 3 of 8) 22487 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak1_35_236_-0.157445575839236_7.81002046097864_0.580352999799549 chr14 20294455 20295071 + 0.580352999799549 NA promoter-TSS (NM_026341) promoter-TSS (NM_026341) 73 NM_026341 67725 Mm.317636 NM_026341 ENSMUSG00000021809 Nudt13 4933433B15Rik nudix (nucleoside diphosphate linked moiety X)-type motif 13 protein-coding common_peak1_35_236_-0.157445575839236_7.81002046097864_0.580352999799549-3 chr4 156021619 156022400 + 0.580352999799549 NA non-coding (NR_040563, exon 3 of 3) non-coding (NR_040563, exon 3 of 3) 1815 NR_040563 100038526 Mm.191866 NR_040563 Gm10560 ENSMUSG00000073673 predicted gene 10560 ncRNA common_peak2_159_1383_-0.063657066446881_10.4027996944133_0.580287255751583 chr15 31529602 31532222 + 0.580287255751583 NA 5' UTR (NM_172606, exon 1 of 26) 5' UTR (NM_172606, exon 1 of 26) 125 NM_172606 223455 Mm.272185 NM_172606 ENSMUSG00000039100 March6 3830408G03|F830029L24Rik|mKIAA0597 membrane-associated ring finger (C3HC4) 6 protein-coding common_peak2_73_551_-0.102128494380402_9.05746020958797_0.580217228593942 chr5 112252518 112255336 + 0.580217228593942 NA Intergenic Intergenic -1409 NM_021351 12959 Mm.40324 NM_021351 ENSMUSG00000066975 Cryba4 - crystallin, beta A4 protein-coding common_peak2_126_948_0.0719464171529349_9.92623748559758_0.580026834734102 chr12 10390724 10391801 + 0.580026834734102 NA intron (NM_023697, intron 1 of 1) intron (NM_023697, intron 1 of 1) 482 NM_023697 105014 Mm.119343 NM_023697 ENSMUSG00000020621 Rdh14 3110030G19Rik|AW215439|PAN2 retinol dehydrogenase 14 (all-trans and 9-cis) protein-coding common_peak2_74_487_0.09941237072678_8.98044352292628_0.579725484927743 chrX 77800676 77802666 + 0.579725484927743 NA Intergenic Intergenic -5711 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding common_peak2_58_359_0.113673308712151_8.54868975068575_0.579719071036643 chr6 120180689 120182509 + 0.579719071036643 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) 88219 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak2_244_2158_0.0488342957665004_11.1005646759058_0.579215517951473 chr17 34030826 34033340 + 0.579215517951473 NA promoter-TSS (NM_008202) promoter-TSS (NM_008202) -267 NM_001205216 20182 Mm.1243 NM_011306 ENSMUSG00000039656 Rxrb AL023085|H-2RIIBP|Nr2b2|RCoR-1|Rub retinoid X receptor beta protein-coding common_peak2_81_545_0.0952984353319302_9.14040635858582_0.579061867728585 chr4 156066982 156069435 + 0.579061867728585 NA Intergenic ID_B1|SINE|B4 -8406 NR_132444 100415901 Mm.437006 NR_132444 ENSMUSG00000086549 Gm13648 OTTMUSG00000013217 predicted gene 13648 ncRNA common_peak1_142_1209_-0.0686009855795291_10.2064908393722_0.579036650986071 chrX 152232748 152233970 + 0.579036650986071 NA 5' UTR (NM_013668, exon 1 of 26) 5' UTR (NM_013668, exon 1 of 26) 132 NM_013668 20591 Mm.142655 NM_013668 ENSMUSG00000025332 Kdm5c D930009K15Rik|Jarid1c|Smcx|mKIAA0234 lysine (K)-specific demethylase 5C protein-coding common_peak1_88_605_0.0898443852912365_9.28809617611857_0.579025920061756 chr4 133158361 133159881 + 0.579025920061756 NA intron (NM_153423, intron 1 of 8) intron (NM_153423, intron 1 of 8) 28488 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak1_222_2062_-0.0520442319320811_10.9845059899204_0.578855894415882 chr4 114985803 114987666 + 0.578855894415882 NA intron (NM_025647, intron 1 of 5) CpG 494 NM_025647 66588 Mm.294159 NM_025647 ENSMUSG00000028719 Cmpk1 0610011D08Rik|CK|Cmpk|UMP-CMPk cytidine monophosphate (UMP-CMP) kinase 1 protein-coding common_peak2_152_1198_0.0641893498665169_10.2597106183475_0.578775900624389 chr1 43239354 43242798 + 0.578775900624389 NA Intergenic Intergenic -44315 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_288_2652_0.0438595433399041_11.3953387318986_0.578733083628934 chr10 26226826 26233506 + 0.578733083628934 NA exon (NM_001013766, exon 2 of 8) exon (NM_001013766, exon 2 of 8) 459 NM_001115154 268288 Mm.213322 NM_001013766 ENSMUSG00000051354 Samd3 Gm623 sterile alpha motif domain containing 3 protein-coding common_peak1_41_232_0.139900810330575_7.93413654981957_0.578690954731888-2 chr8 81703340 81704245 + 0.578690954731888 NA intron (NM_001297591, intron 2 of 24) intron (NM_001297591, intron 2 of 24) 361230 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding common_peak2_41_232_0.139900810330575_7.93413654981957_0.578690954731888 chr13 54503684 54504585 + 0.578690954731888 NA intron (NM_176987, intron 1 of 9) CpG 329 NM_176987 319719 Mm.376151 NM_176987 ENSMUSG00000043183 Simc1 4732471D19Rik SUMO-interacting motifs containing 1 protein-coding common_peak1_41_232_0.139900810330575_7.93413654981957_0.578690954731888 chr2 153291364 153291999 + 0.578690954731888 NA intron (NM_008444, intron 1 of 8) CpG 265 NM_008444 16569 Mm.315560 NM_008444 ENSMUSG00000027475 Kif3b AI854312|AW549267|mKIAA0359 kinesin family member 3B protein-coding common_peak1_266_2403_0.0459317042062857_11.2541870328143_0.578466026174828 chr4 130898440 130900510 + 0.578466026174828 NA Intergenic Intergenic -13859 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding common_peak1_24_118_0.19119742882844_6.99041647772216_0.578253273323342-2 chr11 108282836 108283319 + 0.578253273323342 NA intron (NM_011101, intron 2 of 16) MIR|SINE|MIR 60811 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding unique_peak2_24_118_0.19119742882844_6.99041647772216_0.578253273323342 chr17 17618555 17619557 + 0.578253273323342 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 5433 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding common_peak1_24_118_0.19119742882844_6.99041647772216_0.578253273323342-5 chr9 48480012 48480578 + 0.578253273323342 NA intron (NM_024233, intron 1 of 6) intron (NM_024233, intron 1 of 6) 316 NM_024233 104444 Mm.21911 NM_024233 ENSMUSG00000032026 Rexo2 1810038D15Rik|AW107347|Rex2|Sfn|Smfn RNA exonuclease 2 protein-coding common_peak1_24_118_0.19119742882844_6.99041647772216_0.578253273323342 chr10 128820996 128821485 + 0.578253273323342 NA promoter-TSS (NM_025364) promoter-TSS (NM_025364) 391 NM_024180 66844 Mm.235562 NM_024180 ENSMUSG00000025353 Ormdl2 0610012C09Rik ORM1-like 2 (S. cerevisiae) protein-coding common_peak1_24_118_0.19119742882844_6.99041647772216_0.578253273323342-3 chr15 80681466 80682040 + 0.578253273323342 NA intron (NM_145986, intron 1 of 4) intron (NM_145986, intron 1 of 4) 9906 NM_145986 213956 Mm.132439 NM_145986 ENSMUSG00000022408 Fam83f AW544981 family with sequence similarity 83, member F protein-coding unique_peak2_24_118_0.19119742882844_6.99041647772216_0.578253273323342-2 chr2 173034580 173035616 + 0.578253273323342 NA TTS (NM_019547) TTS (NM_019547) 13196 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak1_24_118_0.19119742882844_6.99041647772216_0.578253273323342-4 chr5 140515252 140515795 + 0.578253273323342 NA intron (NM_021528, intron 1 of 1) ZP3AR|Satellite|Satellite 9914 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak1_134_1128_-0.0705166170550857_10.1055714622455_0.577936692950664 chr6 86471592 86473417 + 0.577936692950664 NA intron (NR_131125, intron 4 of 4) intron (NR_131125, intron 4 of 4) 8326 NR_131125 320486 Mm.391625 NR_131125 ENSMUSG00000085589 A430078I02Rik T25621 RIKEN cDNA A430078I02 gene ncRNA common_peak2_134_1128_-0.0705166170550857_10.1055714622455_0.577936692950664 chr18 56755540 56757122 + 0.577936692950664 NA Intergenic Intergenic 48518 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak2_127_957_0.0722083509480562_9.93998602121021_0.577469282027243 chr2 127207479 127209332 + 0.577469282027243 NA promoter-TSS (NM_177214) promoter-TSS (NM_177214) 1 NM_177214 320632 Mm.215860 NM_177214 ENSMUSG00000003660 Snrnp200 A330064G03Rik|Ascc3l1|BC011390|HELIC2|U5-200-KD|U5-200KD small nuclear ribonucleoprotein 200 (U5) protein-coding common_peak1_92_640_0.0866361742688486_9.36749863375316_0.577398761286899 chr19 9052771 9054105 + 0.577398761286899 NA intron (NM_001286518, intron 6 of 6) intron (NM_001286518, intron 6 of 6) 34518 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_14_60_0.251306783848461_6.05639072948712_0.577394982162938-2 chr2 30534876 30535282 + 0.577394982162938 NA Intergenic Intergenic -59965 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding common_peak1_14_60_0.251306783848461_6.05639072948712_0.577394982162938-3 chr4 59532310 59532768 + 0.577394982162938 NA intron (NM_178164, intron 1 of 13) intron (NM_178164, intron 1 of 13) 16825 NM_178164 230257 Mm.331640 NM_144904 ENSMUSG00000028382 Ptbp3 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1 polypyrimidine tract binding protein 3 protein-coding common_peak1_14_60_0.251306783848461_6.05639072948712_0.577394982162938 chr14 121340884 121341266 + 0.577394982162938 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 38155 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding unique_peak2_14_60_0.251306783848461_6.05639072948712_0.577394982162938 chr17 36415771 36416252 + 0.577394982162938 NA Intergenic Intergenic 46318 NM_177634 224753 Mm.246581 NM_177634 ENSMUSG00000048231 H2-M10.4 15H histocompatibility 2, M region locus 10.4 protein-coding common_peak1_67_499_-0.109023401315204_8.91127258400449_0.577316562687154 chr6 37441366 37442299 + 0.577316562687154 NA 5' UTR (NM_178661, exon 1 of 12) 5' UTR (NM_178661, exon 1 of 12) 316 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding unique_peak2_28_184_-0.182718146003744_7.44002238751444_0.577169690232144 chr11 85126371 85127594 + 0.577169690232144 NA intron (NM_001029934, intron 1 of 33) intron (NM_001029934, intron 1 of 33) 12973 NM_001029934 237898 Mm.178524 NM_001029934 ENSMUSG00000000804 Usp32 2900074J03Rik|6430526O11Rik|AW045245 ubiquitin specific peptidase 32 protein-coding common_peak2_28_184_-0.182718146003744_7.44002238751444_0.577169690232144-3 chr3 144400930 144401941 + 0.577169690232144 NA Intergenic Intergenic 168781 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding common_peak2_28_184_-0.182718146003744_7.44002238751444_0.577169690232144 chr10 21188356 21189331 + 0.577169690232144 NA Intergenic Intergenic -27859 NM_010848 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding unique_peak2_28_184_-0.182718146003744_7.44002238751444_0.577169690232144-2 chr2 144239829 144241040 + 0.577169690232144 NA Intergenic Intergenic 25768 NR_030762 100313519 Mm.453538 NR_030762 ENSMUSG00000077714 Snord17 MBI-43 small nucleolar RNA, C/D box 17 snoRNA common_peak2_28_184_-0.182718146003744_7.44002238751444_0.577169690232144-2 chr11 114907832 114908737 + 0.577169690232144 NA Intergenic MTD|LTR|ERVL-MaLR 18243 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding common_peak1_31_163_0.16531356969344_7.4402087894648_0.577169690232094 chr12 51970867 51971414 + 0.577169690232094 NA intron (NM_177171, intron 1 of 35) CpG 181 NM_177171 320487 Mm.131941 NM_177171 ENSMUSG00000035181 Heatr5a C230081H03Rik|D930036F22Rik|mKIAA1316 HEAT repeat containing 5A protein-coding common_peak2_31_163_0.16531356969344_7.4402087894648_0.577169690232094 chr9 122188031 122188972 + 0.577169690232094 NA intron (NM_133979, intron 12 of 12) intron (NM_133979, intron 12 of 12) 71235 NM_133741 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak2_78_520_0.0969595288348089_9.07361932669591_0.577105275708054 chrX 159371141 159373159 + 0.577105275708054 NA promoter-TSS (NM_025437) promoter-TSS (NM_025437) -45 NM_025437 66235 Mm.294623 NM_025437 ENSMUSG00000067194 Eif1ax 1500010B24Rik|AI426898|Eif1ay eukaryotic translation initiation factor 1A, X-linked protein-coding common_peak2_208_1907_-0.0540998394807684_10.8707955362651_0.577103831183403 chr3 90611604 90615779 + 0.577103831183403 NA intron (NM_011313, intron 1 of 2) intron (NM_011313, intron 1 of 2) 797 NM_011313 20200 Mm.100144 NM_011313 ENSMUSG00000001025 S100a6 2A9|5B10|CALCYCLIN|Cacy|PRA S100 calcium binding protein A6 (calcyclin) protein-coding common_peak2_110_893_-0.0802128538186224_9.76402459427401_0.576899271095324 chr10 81863365 81864871 + 0.576899271095324 NA intron (NM_001243067, intron 1 of 3).2 CpG 184 NM_001243067 73610 Mm.490466 NM_001243067 ENSMUSG00000096795 Zfp433 1700123A16Rik zinc finger protein 433 protein-coding common_peak1_110_893_-0.0802128538186224_9.76402459427401_0.576899271095324 chr7 88206459 88207843 + 0.576899271095324 NA Intergenic Intergenic -70934 NM_009982 13032 Mm.89295 NM_009982 ENSMUSG00000030560 Ctsc AI047818|CatC|DPP1|DPPI cathepsin C protein-coding common_peak2_84_650_-0.0948718853131432_9.29907779050906_0.576818858575009 chr1 52844009 52845930 + 0.576818858575009 NA promoter-TSS (NM_146108) promoter-TSS (NM_146108) -69 NM_146108 227095 Mm.222063 NM_146108 ENSMUSG00000041426 Hibch 2610509I15Rik|HIBYL-COA-H 3-hydroxyisobutyryl-Coenzyme A hydrolase protein-coding common_peak1_84_650_-0.0948718853131432_9.29907779050906_0.576818858575009 chr10 70096395 70097782 + 0.576818858575009 NA promoter-TSS (NM_001111121) promoter-TSS (NM_001111121) -33 NM_001111121 76551 Mm.281741 NM_001111121 ENSMUSG00000048701 Ccdc6 2810012H18Rik|AA536681|AA960498|AW061011 coiled-coil domain containing 6 protein-coding common_peak2_46_323_-0.136718915458607_8.27149054515532_0.576599137620596 chr17 30518170 30519895 + 0.576599137620596 NA intron (NM_172618, intron 4 of 11) (CAGCT)n|Simple_repeat|Simple_repeat 57255 NM_172618 224671 Mm.41220 NM_027060 ENSMUSG00000062202 Btbd9 1700023F20Rik|4930402L05|AI464421 BTB (POZ) domain containing 9 protein-coding common_peak1_38_259_-0.149424363420594_7.94765563131816_0.576436185350078 chr12 73286183 73286760 + 0.576436185350078 NA promoter-TSS (NM_001037717) promoter-TSS (NM_001037717) 240 NM_029580 76357 Mm.311344 NM_029580 ENSMUSG00000034442 Trmt5 2610027O18Rik|mKIAA1393 TRM5 tRNA methyltransferase 5 protein-coding unique_peak2_38_259_-0.149424363420594_7.94765563131816_0.576436185350078 chr8 82397953 82399868 + 0.576436185350078 NA intron (NM_001254747, intron 1 of 7) intron (NM_001254747, intron 1 of 7) 3676 NM_001254747 16168 Mm.4392 NM_008357 ENSMUSG00000031712 Il15 AI503618|IL-15 interleukin 15 protein-coding common_peak1_38_259_-0.149424363420594_7.94765563131816_0.576436185350078-2 chr6 99247489 99248112 + 0.576436185350078 NA intron (NM_001197321, intron 2 of 17) intron (NM_001197321, intron 2 of 17) 18715 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_96_675_0.0844589270812257_9.4431088998228_0.576249732516195 chr2 161108225 161109175 + 0.576249732516195 NA intron (NM_173368, intron 1 of 36) CpG 386 NM_173368 71389 Mm.122738 NM_173368 ENSMUSG00000057133 Chd6 5430439G14Rik|6330406J24Rik|CHD-6 chromodomain helicase DNA binding protein 6 protein-coding common_peak2_161_1404_-0.0634000209290537_10.4246544046438_0.576020023913897 chr2 101810088 101814416 + 0.576020023913897 NA intron (NM_001110849, intron 2 of 9) ID_B1|SINE|B4 -14545 NM_001083810 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak1_149_1168_0.0657028049443689_10.2239106170038_0.575780453616325 chr18 84091386 84092962 + 0.575780453616325 NA intron (NM_146090, intron 1 of 1) CpG 4016 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding common_peak1_61_447_-0.114060406136941_8.75032471898913_0.575746924782924 chr3 89266377 89267251 + 0.575746924782924 NA exon (NM_026767, exon 2 of 2) exon (NM_026767, exon 2 of 2) 353 NM_026767 68563 Mm.272927 NM_026767 ENSMUSG00000042737 Dpm3 1110001H19Rik|AV117483 dolichyl-phosphate mannosyltransferase polypeptide 3 protein-coding common_peak1_52_371_-0.123417045664919_8.47745028827557_0.575595142600695 chr5 105109555 105110314 + 0.575595142600695 NA intron (NM_172777, intron 1 of 10) intron (NM_172777, intron 1 of 10) 358 NM_172777 236573 Mm.425261 NM_172777 ENSMUSG00000029298 Gbp9 - guanylate-binding protein 9 protein-coding common_peak1_74_560_-0.101707252319127_9.08100333444923_0.57557517559028 chr1 86491758 86493086 + 0.57557517559028 NA Intergenic Intergenic -34314 NM_008972 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak2_204_1863_-0.0546372927105327_10.836867498299_0.575537015866864 chr16 96369395 96373846 + 0.575537015866864 NA intron (NM_028078, intron 2 of 7) intron (NM_028078, intron 2 of 7) 9856 NM_028078 72058 Mm.119714 NM_028078 ENSMUSG00000000159 Igsf5 2010003D20Rik|JCAM|Jam4 immunoglobulin superfamily, member 5 protein-coding common_peak2_47_275_0.131863322500283_8.17445611802831_0.575480879305751-2 chr10 75288645 75290443 + 0.575480879305751 NA intron (NM_153406, intron 13 of 15) intron (NM_153406, intron 13 of 15) -27333 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak2_47_275_0.131863322500283_8.17445611802831_0.575480879305751 chr10 58254880 58256131 + 0.575480879305751 NA promoter-TSS (NM_027375) promoter-TSS (NM_027375) -21 NM_027375 70297 Mm.25531 NM_027375 ENSMUSG00000038039 Gcc2 0610043A03Rik|2210420P05Rik|2600014C01Rik|AW112121|mKIAA0336 GRIP and coiled-coil domain containing 2 protein-coding unique_peak2_22_106_0.196993817692364_6.83996389524733_0.575323971992889 chr1 79858080 79859122 + 0.575323971992889 NA promoter-TSS (NM_009255) promoter-TSS (NM_009255) 64 NM_009255 20720 Mm.3093 NM_009255 ENSMUSG00000026249 Serpine2 B230326M24Rik|PAI-1|PI-7|PI7|PN-1|Spi4 serine (or cysteine) peptidase inhibitor, clade E, member 2 protein-coding unique_peak2_22_106_0.196993817692364_6.83996389524733_0.575323971992889-2 chr5 117510735 117511669 + 0.575323971992889 NA intron (NM_001312914, intron 3 of 19) intron (NM_001312914, intron 3 of 19) 97200 NM_001312914 333050 Mm.437947 NM_001034873 ENSMUSG00000061578 Ksr2 - kinase suppressor of ras 2 protein-coding common_peak1_33_221_-0.164267294189579_7.71228221925532_0.575322712186957-3 chr6 114903655 114904274 + 0.575322712186957 NA intron (NM_177683, intron 1 of 4) intron (NM_177683, intron 1 of 4) 17788 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding common_peak1_33_221_-0.164267294189579_7.71228221925532_0.575322712186957-2 chr11 87453126 87453881 + 0.575322712186957 NA intron (NM_031386, intron 2 of 30) ERVB7_2-LTR_MM|LTR|ERVK 25912 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_33_221_-0.164267294189579_7.71228221925532_0.575322712186957 chr11 52299106 52299725 + 0.575322712186957 NA Intergenic Intergenic -16401 NM_001313981 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak2_55_396_-0.119818135938676_8.57308612917362_0.57532204666392 chr13 20858132 20859722 + 0.57532204666392 NA intron (NM_012054, intron 4 of 20) intron (NM_012054, intron 4 of 20) 64814 NM_012054 27052 Mm.314046 NM_012054 ENSMUSG00000021322 Aoah 4930433E13Rik acyloxyacyl hydrolase protein-coding common_peak2_55_396_-0.119818135938676_8.57308612917362_0.57532204666392-2 chr4 129826817 129829172 + 0.57532204666392 NA intron (NM_001164745, intron 1 of 5) intron (NM_001164745, intron 1 of 5) 7286 NM_001164745 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding common_peak2_88_686_-0.0911479200539116_9.37859232879114_0.57532170220963 chr1 80635888 80638702 + 0.57532170220963 NA intron (NM_001285927, intron 2 of 55) intron (NM_001285927, intron 2 of 55) 28057 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak1_381_3753_0.0367708823422763_11.892598376002_0.575298780357883 chr11 20740472 20743336 + 0.575298780357883 NA promoter-TSS (NM_001252503) promoter-TSS (NM_001252503) -348 NM_181411 216549 Mm.356580 NM_181411 ENSMUSG00000049659 Aftph - aftiphilin protein-coding common_peak2_186_1540_0.0572665275872382_10.6182844103084_0.575263251150642 chrX 38562657 38565742 + 0.575263251150642 NA exon (NM_001110142, exon 4 of 23) exon (NM_001110142, exon 4 of 23) 11997 NM_028288 72584 Mm.327675 NM_028288 ENSMUSG00000031095 Cul4b 2700050M05Rik|AA409770|CUL-4B|mKIAA0695 cullin 4B protein-coding common_peak1_62_390_0.110584362644429_8.66631697862957_0.574941777143566 chr10 40447469 40448740 + 0.574941777143566 NA intron (NM_001291817, intron 4 of 11) intron (NM_001291817, intron 4 of 11) 98796 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak1_273_2643_-0.0455565937864755_11.3457281646145_0.574759209482188 chr4 134751635 134755260 + 0.574759209482188 NA intron (NM_145554, intron 4 of 8) intron (NM_145554, intron 4 of 8) 14557 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak2_185_1657_-0.0577992594218042_10.6663286617848_0.574720024305547 chr1 92905591 92908113 + 0.574720024305547 NA promoter-TSS (NM_175118) promoter-TSS (NM_175118) -137 NM_175118 67446 Mm.46179 NM_175118 ENSMUSG00000047067 Dusp28 0710001B24Rik|AV005521 dual specificity phosphatase 28 protein-coding common_peak2_103_826_-0.0830976521576314_9.65019469309246_0.574695613794662 chr10 67284241 67286229 + 0.574695613794662 NA promoter-TSS (NM_001036293) promoter-TSS (NM_001036293) 46 NM_001036293 641340 Mm.136223 NM_001036293 ENSMUSG00000075000 Nrbf2 NRBF-2 nuclear receptor binding factor 2 protein-coding common_peak1_103_826_-0.0830976521576314_9.65019469309246_0.574695613794662 chr6 87530589 87531955 + 0.574695613794662 NA intron (NM_001037727, intron 1 of 10) MER5A|DNA|hAT-Charlie 1987 NM_001037727 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak1_127_1058_-0.0723966773081006_10.0122885353383_0.574568690650594 chr5 137115233 137116797 + 0.574568690650594 NA intron (NM_201373, intron 1 of 2) C-rich|Low_complexity|Low_complexity 192 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak2_127_1058_-0.0723966773081006_10.0122885353383_0.574568690650594 chr7 143711436 143714290 + 0.574568690650594 NA intron (NM_024289, intron 3 of 21) intron (NM_024289, intron 3 of 21) -26988 NR_131763 79201 Mm.290780 NM_024290 ENSMUSG00000037613 Tnfrsf23 SOB|TNFRSFH23|Tnfrh1|Tnfrsf1al1|mDcTRAILR1|mSOB tumor necrosis factor receptor superfamily, member 23 protein-coding common_peak1_26_169_-0.187183369298107_7.31579925148865_0.574351534900027-2 chr7 105399423 105400007 + 0.574351534900027 NA intron (NM_001242363, intron 1 of 12) intron (NM_001242363, intron 1 of 12) 339 NM_001242364 74349 Mm.30254 NM_199009 ENSMUSG00000044465 Fam160a2 4632419K20Rik|6530415H11Rik|FHIP family with sequence similarity 160, member A2 protein-coding common_peak1_26_169_-0.187183369298107_7.31579925148865_0.574351534900027 chr1 119837047 119837503 + 0.574351534900027 NA promoter-TSS (NM_019933) promoter-TSS (NM_019933) -204 NM_019933 19258 Mm.458796 NM_019933 ENSMUSG00000026384 Ptpn4 PTPMEG|Ptn4|TEP|TEP/mPTPMEG|hPTP-MEG protein tyrosine phosphatase, non-receptor type 4 protein-coding common_peak2_26_169_-0.187183369298107_7.31579925148865_0.574351534900027 chr7 101663500 101664266 + 0.574351534900027 NA exon (NM_009191, exon 1 of 16) exon (NM_009191, exon 1 of 16) 115 NM_009191 20480 Mm.3990 NM_009191 ENSMUSG00000001829 Clpb AL118244|Skd3 ClpB caseinolytic peptidase B protein-coding common_peak2_190_1711_-0.0570954804143522_10.712919246194_0.574340817203075 chr11 85310348 85312495 + 0.574340817203075 NA 5' UTR (NM_016910, exon 1 of 6) 5' UTR (NM_016910, exon 1 of 6) 167 NM_016910 53892 Mm.45609 NM_016910 ENSMUSG00000020525 Ppm1d AV338790|Wip1 protein phosphatase 1D magnesium-dependent, delta isoform protein-coding common_peak1_18_82_0.225324772049966_6.48770181737191_0.574300793406264 chr11 58914489 58914908 + 0.574300793406264 NA Intergenic Intergenic -3359 NM_138678 192194 Mm.22540 NM_138678 ENSMUSG00000020490 Btnl10 BUTR-1|Butr1 butyrophilin-like 10 protein-coding unique_peak2_18_82_0.225324772049966_6.48770181737191_0.574300793406264-2 chr15 74991236 74992013 + 0.574300793406264 NA Intergenic RMER10B|LTR|ERVL 6407 NM_001271417 110454 Mm.425949 NM_010738 ENSMUSG00000075602 Ly6a Ly-6A.2|Ly-6A/E|Ly-6E.1|Sca-1|Sca1|TAP lymphocyte antigen 6 complex, locus A protein-coding common_peak2_18_82_0.225324772049966_6.48770181737191_0.574300793406264 chr4 140773748 140774437 + 0.574300793406264 NA exon (NM_011061, exon 1 of 16) exon (NM_011061, exon 1 of 16) 111 NM_011061 18602 Mm.250358 NM_011061 ENSMUSG00000025330 Padi4 Pad4|Pdi4 peptidyl arginine deiminase, type IV protein-coding common_peak1_18_82_0.225324772049966_6.48770181737191_0.574300793406264-4 chr7 47112056 47112573 + 0.574300793406264 NA intron (NM_001163565, intron 2 of 13) intron (NM_001163565, intron 2 of 13) 20284 NM_001163565 19259 Mm.4654 NM_013643 ENSMUSG00000030854 Ptpn5 Step protein tyrosine phosphatase, non-receptor type 5 protein-coding common_peak1_18_82_0.225324772049966_6.48770181737191_0.574300793406264-2 chr11 79653913 79654314 + 0.574300793406264 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) 20973 NR_045898 72218 Mm.443271 NR_045898 ENSMUSG00000086569 Rab11fip4os2 1700020F10Rik|4930542H20Rik|Rab11fib4os2 RAB11 family interacting protein 4 (class II), opposite strand 2 ncRNA unique_peak2_18_82_0.225324772049966_6.48770181737191_0.574300793406264 chr12 112866868 112867498 + 0.574300793406264 NA Intergenic Intergenic -6267 NM_019925 56696 Mm.20455 NM_019925 ENSMUSG00000021298 Gpr132 G2a G protein-coupled receptor 132 protein-coding common_peak1_18_82_0.225324772049966_6.48770181737191_0.574300793406264-5 chr8 120822692 120823039 + 0.574300793406264 NA Intergenic Intergenic 84226 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding unique_peak2_18_82_0.225324772049966_6.48770181737191_0.574300793406264-4 chr9 114777487 114778102 + 0.574300793406264 NA intron (NM_001252479, intron 1 of 3) ID_B1|SINE|B4 4199 NM_133978 102545 Mm.35600 NM_133978 ENSMUSG00000032436 Cmtm7 AI481279|Cklfsf7|LNV CKLF-like MARVEL transmembrane domain containing 7 protein-coding common_peak1_18_82_0.225324772049966_6.48770181737191_0.574300793406264-3 chr7 27595680 27596191 + 0.574300793406264 NA intron (NM_001110208, intron 1 of 13) intron (NM_001110208, intron 1 of 13) 4375 NM_001110208 11652 Mm.177194 NM_007434 ENSMUSG00000004056 Akt2 2410016A19Rik|AW554154|PKB|PKBbeta thymoma viral proto-oncogene 2 protein-coding unique_peak2_18_82_0.225324772049966_6.48770181737191_0.574300793406264-3 chr17 30626723 30627378 + 0.574300793406264 NA promoter-TSS (NR_045287) promoter-TSS (NR_045287) 114 NM_013811 13417 Mm.426017 NM_013811 ENSMUSG00000033826 Dnah8 ATPase|Dnahc8|Hst6.7b|P1-Loop dynein, axonemal, heavy chain 8 protein-coding common_peak1_16_71_0.23361125953186_6.28673063120824_0.57422342071824 chr1 193273371 193273719 + 0.57422342071824 NA promoter-TSS (NM_008059) promoter-TSS (NM_008059) -357 NM_008059 14373 Mm.439721 NM_008059 ENSMUSG00000009633 G0s2 AI255151|AV006465 G0/G1 switch gene 2 protein-coding unique_peak2_16_71_0.23361125953186_6.28673063120824_0.57422342071824 chr10 39133760 39134474 + 0.57422342071824 NA promoter-TSS (NM_183254) promoter-TSS (NM_183254) 94 NM_028006 71924 Mm.297956 NM_028006 ENSMUSG00000019845 Tube1 2310061K05Rik|AI551343|Tube epsilon-tubulin 1 protein-coding unique_peak2_16_71_0.23361125953186_6.28673063120824_0.57422342071824-2 chr4 147875812 147876502 + 0.57422342071824 NA intron (NM_001285922, intron 18 of 18) intron (NM_001285922, intron 18 of 18) 7178 NM_010244 14349 Mm.422607 NM_010244 ENSMUSG00000070583 Fv1 Fv-1|Rv-1|Rv1 Friend virus susceptibility 1 protein-coding common_peak1_16_71_0.23361125953186_6.28673063120824_0.57422342071824-2 chr13 43235871 43236301 + 0.57422342071824 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -64585 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak2_120_892_0.0740504795142254_9.83954160487833_0.574154723380883 chr14 26066338 26067810 + 0.574154723380883 NA promoter-TSS (NM_001270499).2 promoter-TSS (NM_001270499).2 -71 NM_025311 66039 Mm.33344 NM_025311 ENSMUSG00000072676 Tmem254a 0610008K04Rik|0610010A22Rik|AA960404|D14Ertd449e|Tmem254 transmembrane protein 254a protein-coding common_peak1_115_941_-0.0776953127275029_9.84073559324903_0.573856809365419 chr2 25223699 25224726 + 0.573856809365419 NA exon (NM_146116, exon 2 of 4) exon (NM_146116, exon 2 of 4) 490 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding unique_peak2_20_94_0.20761903546755_6.67366512606472_0.573808562009265-2 chr3 31136511 31137348 + 0.573808562009265 NA Intergenic Intergenic -12991 NM_008770 18417 Mm.4425 NM_008770 ENSMUSG00000037625 Cldn11 Claudin-11|Claudin11|Osp|Otm claudin 11 protein-coding unique_peak2_20_94_0.20761903546755_6.67366512606472_0.573808562009265 chr1 151024978 151025669 + 0.573808562009265 NA Intergenic UCON26|Unknown|Unknown -31888 NM_001024720 545370 Mm.379425 NM_001024720 ENSMUSG00000066842 Hmcn1 EG545370|FIBL-6|Gm201 hemicentin 1 protein-coding common_peak1_20_94_0.20761903546755_6.67366512606472_0.573808562009265-2 chr6 97217849 97218387 + 0.573808562009265 NA intron (NM_022992, intron 1 of 2) ID4|SINE|ID 7326 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak1_20_94_0.20761903546755_6.67366512606472_0.573808562009265 chr11 76456436 76456878 + 0.573808562009265 NA exon (NM_198895, exon 11 of 23) exon (NM_198895, exon 11 of 23) 11808 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak1_383_3778_0.036435909577559_11.9020067580487_0.573507012505666 chr10 68276317 68281181 + 0.573507012505666 NA promoter-TSS (NM_023598) promoter-TSS (NM_023598) -23 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_72_471_0.0996759770237876_8.93248103787374_0.57335578478086 chr15 82364249 82365931 + 0.57335578478086 NA Intergenic MMVL30-int|LTR|ERV1 -10799 NM_025987 67130 Mm.27570 NM_025987 ENSMUSG00000022450 Ndufa6 14kDa|2700038D15Rik|B230217P19Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14) protein-coding unique_peak2_12_74_-0.300009757041304_6.07881381197523_0.573287859224659-4 chr19 46609843 46610591 + 0.573287859224659 NA intron (NM_001177812, intron 2 of 4) MIR|SINE|MIR 11111 NM_146099 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding unique_peak2_12_74_-0.300009757041304_6.07881381197523_0.573287859224659-3 chr17 46967198 46967945 + 0.573287859224659 NA intron (NM_146078, intron 18 of 46) intron (NM_146078, intron 18 of 46) 42961 NM_146078 224826 Mm.28234 NM_146078 ENSMUSG00000023977 Ubr2 9930021A08Rik|AI462103|AW540746|E130209G04Rik|ENSMUSG00000043296|mKIAA0349 ubiquitin protein ligase E3 component n-recognin 2 protein-coding unique_peak2_12_74_-0.300009757041304_6.07881381197523_0.573287859224659-2 chr16 4583537 4584134 + 0.573287859224659 NA Intergenic GA-rich|Low_complexity|Low_complexity -10878 NM_031184 83396 Mm.134072 NM_031184 ENSMUSG00000014303 Glis2 Gli5|Klf16|Nkl GLIS family zinc finger 2 protein-coding unique_peak2_12_74_-0.300009757041304_6.07881381197523_0.573287859224659 chr13 108273107 108273680 + 0.573287859224659 NA intron (NM_029001, intron 5 of 7) intron (NM_029001, intron 5 of 7) -42944 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak1_78_595_-0.0970694293488457_9.17063380578774_0.573267412377425 chr19 53410774 53412293 + 0.573267412377425 NA Intergenic B4A|SINE|B4 -20960 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak1_39_218_0.142959479215959_7.84626679920915_0.573059600639488-2 chr18 38600868 38601498 + 0.573059600639488 NA promoter-TSS (NM_011898) promoter-TSS (NM_011898) 85 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty homolog 4 (Drosophila) protein-coding common_peak1_39_218_0.142959479215959_7.84626679920915_0.573059600639488 chr10 62327189 62328160 + 0.573059600639488 NA intron (NM_010438, intron 4 of 21) intron (NM_010438, intron 4 of 21) 12747 NM_001146100 15275 Mm.196605 NM_010438 ENSMUSG00000037012 Hk1 BB404130|Hk-1|Hk1-s|dea|mHk1-s hexokinase 1 protein-coding common_peak2_39_218_0.142959479215959_7.84626679920915_0.573059600639488 chr5 134213882 134215237 + 0.573059600639488 NA intron (NM_053266, intron 14 of 15) intron (NM_053266, intron 14 of 15) 15066 NM_001286037 17969 Mm.425296 NM_010876 ENSMUSG00000015950 Ncf1 NCF-47K|NOXO2|Ncf-1|p47-phox|p47|p47phox neutrophil cytosolic factor 1 protein-coding common_peak1_39_218_0.142959479215959_7.84626679920915_0.573059600639488-3 chr2 156278026 156278821 + 0.573059600639488 NA intron (NM_172674, intron 9 of 17) intron (NM_172674, intron 9 of 17) -34050 NM_027585 70873 Mm.475234 NM_027585 ENSMUSG00000038085 Cnbd2 4921517L17Rik|5430421B09Rik|Cris cyclic nucleotide binding domain containing 2 protein-coding common_peak2_197_1655_0.054579817501196_10.7207768662499_0.57288297873858 chr2 79046840 79052474 + 0.57288297873858 NA Intergenic Intergenic 180610 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_265_2392_0.0459079423102171_11.2475586526936_0.572766007504328 chr8 79638391 79640860 + 0.572766007504328 NA promoter-TSS (NM_001081164) promoter-TSS (NM_001081164) -51 NM_001256033 73945 Mm.34348 NM_001081164 ENSMUSG00000036990 Otud4 4930431L18Rik|AI449692|D8Ertd69e|mKIAA1046 OTU domain containing 4 protein-coding common_peak1_29_150_0.170251693272625_7.32353058596139_0.572641038426841 chr15 89196701 89197181 + 0.572641038426841 NA promoter-TSS (NM_027081) promoter-TSS (NM_027081) -467 NM_027081 69440 Mm.482128 NM_027081 ENSMUSG00000015377 Dennd6b 1700027J05Rik|AI414881|Fam116b DENN/MADD domain containing 6B protein-coding common_peak2_29_150_0.170251693272625_7.32353058596139_0.572641038426841 chr19 4064134 4065083 + 0.572641038426841 NA Intergenic MMVL30-int|LTR|ERV1 -5314 NM_144869 225884 Mm.440201 NM_144869 ENSMUSG00000058216 Gstp3 - glutathione S-transferase pi 3 protein-coding common_peak2_100_797_-0.0833967426168876_9.5985465649139_0.572290342712069 chr14 69283733 69285697 + 0.572290342712069 NA intron (NM_026331, intron 1 of 3) CpG 388 NM_026331 67712 Mm.293635 NM_026331 ENSMUSG00000034248 Slc25a37 1700020E22Rik|4930513O14Rik|4930526G11Rik|AI848481|C330015G08Rik|Mfrn|Mfrn1|Mscp|frascati|mitoferrin solute carrier family 25, member 37 protein-coding common_peak2_155_1228_0.0628988716079117_10.2947186361766_0.572140729588346 chr5 122992895 122996112 + 0.572140729588346 NA non-coding (NR_045820, exon 2 of 3) non-coding (NR_045820, exon 2 of 3) 5149 NR_045820 109202 Mm.30769 NM_175405 ENSMUSG00000056735 A930024E05Rik - RIKEN cDNA A930024E05 gene ncRNA common_peak2_183_1510_0.0570097924877508_10.5897928414087_0.571883435909045 chr4 137608350 137611451 + 0.571883435909045 NA intron (NM_130879, intron 6 of 27) intron (NM_130879, intron 6 of 27) 15711 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak1_121_902_0.0725495847524709_9.85485696985709_0.571204547958236 chr4 63388132 63389875 + 0.571204547958236 NA intron (NM_001305432, intron 3 of 20) intron (NM_001305432, intron 3 of 20) 9237 NM_001305432 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak1_250_2226_0.0469116380262093_11.1443416618009_0.570857500132547 chr14 120476976 120479391 + 0.570857500132547 NA promoter-TSS (NM_029519) promoter-TSS (NM_029519) -278 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding common_peak1_36_244_-0.156854287791161_7.85821079510699_0.570712413822028 chr13 48625095 48625681 + 0.570712413822028 NA 5' UTR (NM_001301781, exon 1 of 11) 5' UTR (NM_001301781, exon 1 of 11) 284 NM_207232 218232 Mm.315089 NM_207232 ENSMUSG00000038042 Ptpdc1 AI843923|AW456874|Naa-1|Ptpcd1 protein tyrosine phosphatase domain containing 1 protein-coding unique_peak2_31_206_-0.170621383187801_7.60817626590542_0.570658394082286 chr4 135043958 135045620 + 0.570658394082286 NA Intergenic MTEa|LTR|ERVL-MaLR -75856 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_31_206_-0.170621383187801_7.60817626590542_0.570658394082286 chr16 49863051 49864484 + 0.570658394082286 NA intron (NM_010581, intron 1 of 9) intron (NM_010581, intron 1 of 9) 8113 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding unique_peak2_31_206_-0.170621383187801_7.60817626590542_0.570658394082286-2 chrX 71149573 71151187 + 0.570658394082286 NA intron (NM_001081354, intron 5 of 6) intron (NM_001081354, intron 5 of 6) -60387 NM_001164190 17772 Mm.274981 NM_019926 ENSMUSG00000031337 Mtm1 AF073996|Mtm|mKIAA4176 X-linked myotubular myopathy gene 1 protein-coding common_peak1_31_206_-0.170621383187801_7.60817626590542_0.570658394082286 chr6 35253468 35254038 + 0.570658394082286 NA intron (NR_027875, intron 1 of 2) intron (NR_027875, intron 1 of 2) 1021 NR_027875 67705 Mm.228046 NR_015608 ENSMUSG00000073155 1810058I24Rik AI414869|AI848234 RIKEN cDNA 1810058I24 gene ncRNA common_peak1_24_155_-0.199387026725865_7.18570870549932_0.570603693728192-3 chr4 155840823 155841356 + 0.570603693728192 NA exon (NM_024263, exon 3 of 10) exon (NM_024263, exon 3 of 10) 1409 NM_024263 74761 Mm.159028 NM_024263 ENSMUSG00000029070 Mxra8 1200013A08Rik|1700095D18Rik|AI131686|Asp3|Dicam matrix-remodelling associated 8 protein-coding common_peak1_24_155_-0.199387026725865_7.18570870549932_0.570603693728192-2 chr4 118999841 119000382 + 0.570603693728192 NA Intergenic Intergenic 38144 NM_133892 100470 Mm.26698 NM_133892 ENSMUSG00000024903 Lao1 AW990848 L-amino acid oxidase 1 protein-coding common_peak1_24_155_-0.199387026725865_7.18570870549932_0.570603693728192 chr13 91093570 91094196 + 0.570603693728192 NA intron (NM_025770, intron 3 of 7) intron (NM_025770, intron 3 of 7) 130104 NM_025770 66795 Mm.235385 NM_025770 ENSMUSG00000021619 Atg10 5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l autophagy related 10 protein-coding unique_peak2_24_155_-0.199387026725865_7.18570870549932_0.570603693728192 chr6 3385675 3386795 + 0.570603693728192 NA intron (NM_010156, intron 1 of 1) intron (NM_010156, intron 1 of 1) 13336 NM_010156 209086 Mm.196013 NM_010156 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like protein-coding common_peak2_47_330_-0.130299627528766_8.30553759304284_0.570490713594802 chr9 22116629 22117881 + 0.570490713594802 NA intron (NR_030448, intron 3 of 4) CpG -3086 NM_170777 66126 Mm.29801 NM_170777 ENSMUSG00000013822 Elof1 1110011K10Rik ELF1 homolog, elongation factor 1 protein-coding common_peak1_47_330_-0.130299627528766_8.30553759304284_0.570490713594802 chr10 96204037 96205052 + 0.570490713594802 NA Intergenic RLTR18-int|LTR|ERVK -21663 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA unique_peak2_47_330_-0.130299627528766_8.30553759304284_0.570490713594802 chr6 120485628 120487742 + 0.570490713594802 NA Intergenic Intergenic 7122 NM_033567 94047 Mm.23088 NM_033567 ENSMUSG00000094626 Cecr6 AW048664 cat eye syndrome chromosome region, candidate 6 protein-coding common_peak2_83_563_0.0911479137724172_9.185125309285_0.570459838148301 chr5 107645429 107647281 + 0.570459838148301 NA intron (NM_001289569, intron 11 of 12) intron (NM_001289569, intron 11 of 12) -12505 NR_046195 78443 Mm.490703 NR_046195 ENSMUSG00000085900 A930041C12Rik - RIKEN cDNA A930041C12 gene ncRNA common_peak2_93_732_-0.0879259895214357_9.47370639337309_0.570441701385352 chr6 130339704 130342912 + 0.570441701385352 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -3682 NM_001289604 16634 Mm.425338 NM_010648 ENSMUSG00000067591 Klra3 5E6|Ly49c|NK-2.1|Nk-2|Nk2|Nk2.1 killer cell lectin-like receptor, subfamily A, member 3 protein-coding common_peak1_245_2171_0.0473817046007046_11.1084992401047_0.570313045606815 chr15 80218374 80220234 + 0.570313045606815 NA Intergenic Intergenic -14776 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak2_94_658_0.0843351352671604_9.40630222264163_0.570064681636637 chr10 77258554 77260169 + 0.570064681636637 NA promoter-TSS (NM_030262) promoter-TSS (NM_030262) 61 NM_030262 80294 Mm.203556 NM_030262 ENSMUSG00000020260 Pofut2 2310011G23Rik|AI256847|BC003494|C21orf80|FUT13 protein O-fucosyltransferase 2 protein-coding common_peak2_56_404_-0.117279378221815_8.60313840866108_0.5696707875923 chr10 34206325 34207643 + 0.5696707875923 NA intron (NM_172508, intron 1 of 5) CpG 567 NM_172508 212898 Mm.34557 NM_172508 ENSMUSG00000039497 Dse 6030499O08|AI480506|B130024B19Rik|DS-epi1|Sart2 dermatan sulfate epimerase protein-coding common_peak1_63_398_0.109232949275535_8.69486141086011_0.569646132109578 chr10 19093715 19094904 + 0.569646132109578 NA Intergenic Intergenic -47440 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_63_398_0.109232949275535_8.69486141086011_0.569646132109578-2 chr8 126866711 126867713 + 0.569646132109578 NA Intergenic Intergenic 78709 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak2_86_667_-0.0909064618081992_9.33825106156995_0.569570133562932 chr15 97824163 97826256 + 0.569570133562932 NA intron (NM_001204275, intron 1 of 24) intron (NM_001204275, intron 1 of 24) 6558 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak2_86_667_-0.0909064618081992_9.33825106156995_0.569570133562932-2 chr2 3331682 3333677 + 0.569570133562932 NA promoter-TSS (NM_001013376) promoter-TSS (NM_001013376) -51 NM_001013376 227522 Mm.293948 NM_001013376 ENSMUSG00000049950 Rpp38 C330006A15Rik ribonuclease P/MRP 38 subunit protein-coding common_peak2_53_379_-0.121035730304996_8.50933774317845_0.569557285804507 chr14 27389631 27392309 + 0.569557285804507 NA intron (NM_001289688, intron 6 of 9) intron (NM_001289688, intron 6 of 9) 29581 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_98_693_0.0826626112359037_9.48012315819621_0.569309392151838 chr4 155085647 155086528 + 0.569309392151838 NA promoter-TSS (NM_001081100) promoter-TSS (NM_001081100) 210 NM_026395 67830 Mm.241604 NM_026395 ENSMUSG00000029048 Rer1 1110060F11Rik|5830454N22Rik|AU043380 retention in endoplasmic reticulum sorting receptor 1 protein-coding common_peak2_50_355_-0.128062653838942_8.41170210404693_0.569276786935103 chr11 70618202 70619843 + 0.569276786935103 NA intron (NM_009603, intron 1 of 11) intron (NM_009603, intron 1 of 11) 172 NM_009603 11448 Mm.4980 NM_009603 ENSMUSG00000014609 Chrne AChrepsilon|Acre|nAChRE cholinergic receptor, nicotinic, epsilon polypeptide protein-coding common_peak1_125_1038_-0.0727584677660733_9.98460070502118_0.569007894224089 chr11 118348212 118349748 + 0.569007894224089 NA intron (NM_011594, intron 1 of 4) intron (NM_011594, intron 1 of 4) 6431 NM_011594 21858 Mm.206505 NM_011594 ENSMUSG00000017466 Timp2 D11Bwg1104e|Timp-2 tissue inhibitor of metalloproteinase 2 protein-coding common_peak2_152_1199_0.0629866027848589_10.2603119918883_0.568834909016599 chr2 85036655 85038224 + 0.568834909016599 NA promoter-TSS (NM_001136081) promoter-TSS (NM_001136081) -12 NM_001136081 20833 Mm.219793 NM_182990 ENSMUSG00000027067 Ssrp1 C81323|Hmg1-rs1|Hmgi-rs3|Hmgox|T160 structure specific recognition protein 1 protein-coding common_peak1_27_137_0.178040293239756_7.19754460339805_0.568761005180089 chr7 4081737 4082300 + 0.568761005180089 NA intron (NR_033568, intron 6 of 8) intron (NR_033568, intron 6 of 8) -18814 NM_001302676 52855 Mm.290880 NM_178611 ENSMUSG00000055541 Lair1 5133400O11Rik|BB115266|D7Bwg0421e|Lair-1 leukocyte-associated Ig-like receptor 1 protein-coding common_peak2_151_1300_-0.0652041097618383_10.3128031918369_0.568729977189462 chr15 9070272 9072465 + 0.568729977189462 NA 5' UTR (NM_001085410, exon 1 of 14) 5' UTR (NM_001085410, exon 1 of 14) 108 NM_001040395 68646 Mm.244226 NM_001040395 ENSMUSG00000022253 Nadk2 MNADK|Nadkd1 NAD kinase 2, mitochondrial protein-coding common_peak2_117_960_-0.0762539045455686_9.87026566850097_0.568317431432222 chr4 106968336 106971856 + 0.568317431432222 NA intron (NM_198438, intron 4 of 16) B1_Mus1|SINE|Alu 58626 NM_023672 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak2_240_2263_-0.0488067475772329_11.1202548690433_0.568135353251443 chr7 4811166 4813878 + 0.568135353251443 NA promoter-TSS (NM_133777) promoter-TSS (NM_133777) -182 NM_133777 77891 Mm.389787 NM_133777 ENSMUSG00000060860 Ube2s 0910001J09Rik|6720465F12Rik|AA409170|E2-EPF ubiquitin-conjugating enzyme E2S protein-coding common_peak1_48_283_0.127129117406003_8.21331167820768_0.568070601395805 chr2 90490745 90491598 + 0.568070601395805 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -11997 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding common_peak2_48_283_0.127129117406003_8.21331167820768_0.568070601395805 chr9 96704796 96706450 + 0.568070601395805 NA intron (NM_175537, intron 2 of 2) intron (NM_175537, intron 2 of 2) 26052 NM_175537 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak1_48_283_0.127129117406003_8.21331167820768_0.568070601395805-2 chr9 114018989 114019835 + 0.568070601395805 NA intron (NM_178624, intron 1 of 14) intron (NM_178624, intron 1 of 14) 7339 NM_178624 72179 Mm.386808 NM_178624 ENSMUSG00000032507 Fbxl2 2810423A21Rik|Fbl3 F-box and leucine-rich repeat protein 2 protein-coding common_peak2_210_1792_0.0524395662705874_10.8343795560037_0.568033195745042 chr17 27203144 27204758 + 0.568033195745042 NA exon (NM_146075, exon 1 of 9) exon (NM_146075, exon 1 of 9) 487 NM_146075 224640 Mm.29689 NM_146075 ENSMUSG00000044857 Lemd2 BC026588|Lem2|NET25 LEM domain containing 2 protein-coding common_peak2_148_1159_0.0650159120926865_10.2124170460613_0.568001353630816 chr8 46848592 46853202 + 0.568001353630816 NA Intergenic Intergenic 111152 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak2_344_3491_-0.0391369365043275_11.7502693753773_0.567791805076765 chr6 136514667 136520841 + 0.567791805076765 NA Intergenic B1F1|SINE|Alu -1097 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak2_39_267_-0.14834265164064_7.99191786463745_0.567771930826296 chr18 75478207 75479789 + 0.567771930826296 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -35647 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA unique_peak2_22_141_-0.211286315411172_7.0441039617991_0.567735748774137 chrX 96122025 96123073 + 0.567735748774137 NA intron (NM_010833, intron 1 of 12) intron (NM_010833, intron 1 of 12) 26504 NM_010833 17698 Mm.138876 NM_010833 ENSMUSG00000031207 Msn C78546 moesin protein-coding common_peak1_22_141_-0.211286315411172_7.0441039617991_0.567735748774137 chr15 52750620 52751160 + 0.567735748774137 NA Intergenic Intergenic 38445 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak1_22_141_-0.211286315411172_7.0441039617991_0.567735748774137-2 chr18 79070449 79071089 + 0.567735748774137 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 38622 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak2_54_328_0.119347244650674_8.42161739606058_0.567709442663255 chr2 39190035 39190874 + 0.567709442663255 NA intron (NM_178778, intron 1 of 17) CpG 276 NM_178778 320271 Mm.204836 NM_178778 ENSMUSG00000035236 Scai 9330112M16|A930041I02Rik|AI662729 suppressor of cancer cell invasion protein-coding common_peak2_194_1753_-0.055383995958552_10.7487410344655_0.567668084132164 chr2 166122344 166127402 + 0.567668084132164 NA intron (NM_001252579, intron 2 of 20) intron (NM_001252579, intron 2 of 20) 30412 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak1_292_2699_0.0428499712546557_11.4201686775655_0.567481189202332 chr3 106721258 106723162 + 0.567481189202332 NA intron (NM_028081, intron 1 of 2) CpG 528 NM_001286685 321000 Mm.259638 NM_028081 ENSMUSG00000056260 Lrif1 2010012G17Rik|4933421E11Rik|AI450568 ligand dependent nuclear receptor interacting factor 1 protein-coding common_peak1_14_87_-0.277387497225949_6.32073787002432_0.567375843566121-2 chr2 78998491 78998901 + 0.567375843566121 NA Intergenic Intergenic 129649 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding unique_peak2_14_87_-0.277387497225949_6.32073787002432_0.567375843566121 chr11 46327933 46328584 + 0.567375843566121 NA intron (NM_001281965, intron 16 of 16) L1MC3|LINE|L1 -15399 NM_001252459 76884 Mm.154358 NM_133769 ENSMUSG00000020340 Cyfip2 1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168 cytoplasmic FMR1 interacting protein 2 protein-coding common_peak1_14_87_-0.277387497225949_6.32073787002432_0.567375843566121 chr13 3893197 3893643 + 0.567375843566121 NA 5' UTR (NM_001047159, exon 1 of 10) 5' UTR (NM_001047159, exon 1 of 10) 161 NM_001047159 56349 Mm.22261 NM_019671 ENSMUSG00000021215 Net1 Net1a|mNET1 neuroepithelial cell transforming gene 1 protein-coding unique_peak2_14_87_-0.277387497225949_6.32073787002432_0.567375843566121-2 chr16 64823942 64824693 + 0.567375843566121 NA Intergenic Intergenic -27768 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak2_176_1439_0.057807824865435_10.5207570087624_0.567124078236872 chr11 117653647 117655896 + 0.567124078236872 NA intron (NM_198022, intron 1 of 21) CpG 482 NM_198022 217351 Mm.40272 NM_198022 ENSMUSG00000025571 Tnrc6c 9930033H14Rik|mKIAA1582 trinucleotide repeat containing 6C protein-coding common_peak1_51_306_0.119938710457109_8.32206420059873_0.567120289350079 chrX 113184689 113185579 + 0.567120289350079 NA intron (NM_018818, intron 1 of 14) intron (NM_018818, intron 1 of 14) 381 NM_018818 12662 Mm.257316 NM_018818 ENSMUSG00000025531 Chm Rep-1 choroidermia (RAB escort protein 1) protein-coding common_peak2_51_306_0.119938710457109_8.32206420059873_0.567120289350079 chrX 73342274 73343429 + 0.567120289350079 NA intron (NM_001160229, intron 1 of 4) intron (NM_001160229, intron 1 of 4) 230 NM_001160229 27081 Mm.26595 NM_031494 ENSMUSG00000031365 Zfp275 5430431L06Rik|AI593314|DXBay20|DXHXS52|DXPas8 zinc finger protein 275 protein-coding common_peak2_66_489_-0.106094238852847_8.88359081957615_0.567000875521814-2 chr5 86071110 86072944 + 0.567000875521814 NA intron (NM_001310639, intron 1 of 7) intron (NM_001310639, intron 1 of 7) 281 NM_001310639 56792 Mm.131237 NM_019992 ENSMUSG00000029254 Stap1 AI586015|Brdg1|STAP-1 signal transducing adaptor family member 1 protein-coding common_peak2_66_489_-0.106094238852847_8.88359081957615_0.567000875521814 chr5 34549238 34550292 + 0.567000875521814 NA exon (NM_001145859, exon 1 of 13) exon (NM_001145859, exon 1 of 13) 189 NM_001145859 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak2_263_2526_-0.0460530677248272_11.2801834150824_0.566646796169705 chr11 19923640 19926785 + 0.566646796169705 NA intron (NM_033523, intron 1 of 5) CpG 770 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_152_1310_-0.064646676941015_10.3241286317512_0.566641500370761 chr4 124801561 124803268 + 0.566641500370761 NA promoter-TSS (NM_008636) promoter-TSS (NM_008636) -135 NM_008636 17764 Mm.272397 NM_008636 ENSMUSG00000028890 Mtf1 MTF-1|Thyls metal response element binding transcription factor 1 protein-coding common_peak1_32_170_0.159467432774981_7.49758623127339_0.566448321041239 chr10 80226679 80227187 + 0.566448321041239 NA intron (NM_023431, intron 1 of 13) intron (NM_023431, intron 1 of 13) 335 NM_023431 68114 Mm.273418 NM_023431 ENSMUSG00000020156 Mum1 2610019J09|9430059D04Rik|UBE-1C2 melanoma associated antigen (mutated) 1 protein-coding common_peak1_32_170_0.159467432774981_7.49758623127339_0.566448321041239-2 chr9 44772993 44773596 + 0.566448321041239 NA intron (NM_023831, intron 1 of 11) intron (NM_023831, intron 1 of 11) 285 NM_023831 76568 Mm.278597 NM_023831 ENSMUSG00000002031 Ift46 1500035H01Rik|AA408110|AI663846|R75047|c11orf2 intraflagellar transport 46 protein-coding common_peak1_29_191_-0.176306068123453_7.49680946665943_0.566448321041239-2 chr4 46591710 46592293 + 0.566448321041239 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) 9928 NM_001164804 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak1_29_191_-0.176306068123453_7.49680946665943_0.566448321041239 chr2 155018892 155019479 + 0.566448321041239 NA intron (NM_015770, intron 1 of 3) ERVB4_1-I_MM-int|LTR|ERVK 5615 NM_015770 50518 Mm.315593 NM_015770 ENSMUSG00000027596 a A|ASIP|ASP|As nonagouti protein-coding unique_peak2_34_228_-0.15775807357341_7.76032475131024_0.566445629693918 chr6 54827425 54828918 + 0.566445629693918 NA intron (NM_199143, intron 1 of 4) B1_Mus1|SINE|Alu 11255 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_34_228_-0.15775807357341_7.76032475131024_0.566445629693918-2 chr7 142284340 142285091 + 0.566445629693918 NA Intergenic ERVB4_1-I_MM-int|LTR|ERVK -10352 NM_001199309 100043627 Mm.388589 NM_001199309 ENSMUSG00000056885 Gm4559 - predicted gene 4559 protein-coding common_peak1_34_228_-0.15775807357341_7.76032475131024_0.566445629693918 chr2 32080379 32081127 + 0.566445629693918 NA intron (NM_175511, intron 1 of 1) intron (NM_175511, intron 1 of 1) 2952 NM_175511 241303 Mm.250441 NM_175511 ENSMUSG00000050592 Fam78a A130092J06Rik family with sequence similarity 78, member A protein-coding common_peak1_201_1698_0.0529903676075918_10.756965320988_0.566127087101675 chr7 4500797 4502327 + 0.566127087101675 NA exon (NM_029834, exon 1 of 22) exon (NM_029834, exon 1 of 22) 118 NM_029834 232807 Mm.360391 NM_029834 ENSMUSG00000019254 Ppp1r12c 2410197A17Rik|AI839747|B430101M08|Mbs85 protein phosphatase 1, regulatory (inhibitor) subunit 12C protein-coding common_peak1_20_127_-0.222525356201502_6.88873732189925_0.566048892444129 chr6 116674346 116674775 + 0.566048892444129 NA promoter-TSS (NM_178045) promoter-TSS (NM_178045) -724 NM_178045 213391 Mm.257931 NM_178045 ENSMUSG00000042129 Rassf4 3830411C14Rik|AD037|AI586137 Ras association (RalGDS/AF-6) domain family member 4 protein-coding unique_peak2_20_127_-0.222525356201502_6.88873732189925_0.566048892444129 chr2 93821939 93822754 + 0.566048892444129 NA intron (NM_010163, intron 1 of 13) CpG 222 NM_010163 14043 Mm.4336 NM_010163 ENSMUSG00000027198 Ext2 AI893565 exostoses (multiple) 2 protein-coding common_peak1_18_113_-0.232525810767851_6.71662710878082_0.565999528429208-4 chr8 119830264 119830806 + 0.565999528429208 NA intron (NM_028071, intron 2 of 3) intron (NM_028071, intron 2 of 3) 10044 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak1_18_113_-0.232525810767851_6.71662710878082_0.565999528429208-3 chr6 72549924 72550396 + 0.565999528429208 NA intron (NM_001271395, intron 1 of 9) intron (NM_001271395, intron 1 of 9) 513 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_18_113_-0.232525810767851_6.71662710878082_0.565999528429208 chr2 3419202 3419808 + 0.565999528429208 NA intron (NM_008579, intron 1 of 2) intron (NM_008579, intron 1 of 2) 3143 NM_008579 104362 Mm.2688 NM_008579 ENSMUSG00000026650 Meig1 MLZ-278|Meg1 meiosis expressed gene 1 protein-coding unique_peak2_18_113_-0.232525810767851_6.71662710878082_0.565999528429208-2 chr12 110769882 110771023 + 0.565999528429208 NA intron (NM_027149, intron 1 of 2) intron (NM_027149, intron 1 of 2) 32503 NM_027149 69641 Mm.475762 NM_027149 ENSMUSG00000037957 Wdr20 2310040A13Rik|AI549910|Wdr20a WD repeat domain 20 protein-coding unique_peak2_18_113_-0.232525810767851_6.71662710878082_0.565999528429208 chr11 63908153 63909254 + 0.565999528429208 NA intron (NM_018805, intron 1 of 1) ORR1E|LTR|ERVL-MaLR 13581 NM_018805 54710 Mm.274426 NM_018805 ENSMUSG00000070407 Hs3st3b1 3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 protein-coding common_peak1_18_113_-0.232525810767851_6.71662710878082_0.565999528429208 chr10 119240669 119241097 + 0.565999528429208 NA promoter-TSS (NM_027994) promoter-TSS (NM_027994) -828 NM_027994 71902 Mm.203965 NM_027994 ENSMUSG00000020114 Cand1 2310038O07Rik|6330512O03Rik|AI195005|AI846556|D10Ertd516e|Tp120a|mKIAA0829 cullin associated and neddylation disassociated 1 protein-coding common_peak1_18_113_-0.232525810767851_6.71662710878082_0.565999528429208-2 chr14 51062859 51063337 + 0.565999528429208 NA Intergenic Intergenic -5856 NM_001011875 497106 Mm.379740 NM_001011875 ENSMUSG00000068407 Rnase12 Rai1 ribonuclease, RNase A family, 12 (non-active) protein-coding common_peak2_63_463_-0.108503109629693_8.80372944031273_0.565898076661798 chr5 35574427 35575731 + 0.565898076661798 NA promoter-TSS (NM_030208) promoter-TSS (NM_030208) -9 NM_030208 78890 Mm.98522 NM_030208 ENSMUSG00000029097 Trmt44 2310079F23Rik|Mettl19 tRNA methyltransferase 44 protein-coding common_peak1_123_921_0.0712838866776799_9.88426488376818_0.565771286645849 chr10 120208754 120209626 + 0.565771286645849 NA intron (NM_026617, intron 1 of 6) URR1B|DNA|hAT-Charlie 364 NM_026617 68212 Mm.157426 NM_026617 ENSMUSG00000020225 Tmbim4 0610007H07Rik|AU022431 transmembrane BAX inhibitor motif containing 4 protein-coding common_peak1_114_930_-0.0760709665869648_9.82460187426531_0.56563672345766 chr4 46564500 46566313 + 0.56563672345766 NA intron (NM_178893, intron 1 of 12) intron (NM_178893, intron 1 of 12) 1034 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak1_16_100_-0.254675221777623_6.53087387186298_0.56541812465786-4 chrX 7673961 7674329 + 0.56541812465786 NA non-coding (NR_037581, exon 6 of 6) non-coding (NR_037581, exon 6 of 6) -2755 NM_019755 18824 Mm.18565 NM_019755 ENSMUSG00000031146 Plp2 mIMA4 proteolipid protein 2 protein-coding common_peak1_16_100_-0.254675221777623_6.53087387186298_0.56541812465786-2 chr6 56920009 56920377 + 0.56541812465786 NA intron (NM_026004, intron 1 of 8) PB1|SINE|Alu 3739 NM_026004 107569 Mm.158936 NM_026004 ENSMUSG00000029780 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III protein-coding common_peak1_16_100_-0.254675221777623_6.53087387186298_0.56541812465786-3 chr8 120745494 120745899 + 0.56541812465786 NA exon (NM_001301811, exon 4 of 9) exon (NM_001301811, exon 4 of 9) 7057 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_16_100_-0.254675221777623_6.53087387186298_0.56541812465786 chr5 106803437 106803888 + 0.56541812465786 NA Intergenic Intergenic -106832 NM_026856 52397 Mm.249474 NM_026856 ENSMUSG00000049606 Zfp644 1110068L01Rik|AA408882|BM-005|D5Ertd689e|Zep-2 zinc finger protein 644 protein-coding unique_peak2_16_100_-0.254675221777623_6.53087387186298_0.56541812465786 chr11 100711935 100712636 + 0.56541812465786 NA exon (NM_020004, exon 1 of 18) exon (NM_020004, exon 1 of 18) 182 NM_001038010 14534 Mm.218837 NM_020004 ENSMUSG00000020918 Kat2a 1110051E14Rik|AW212720|Gcn5|Gcn5l2|mmGCN5 K(lysine) acetyltransferase 2A protein-coding common_peak2_221_2049_-0.0508777158417573_10.9759693364719_0.565199569681347 chr17 47609824 47612593 + 0.565199569681347 NA promoter-TSS (NM_020048) promoter-TSS (NM_020048) 284 NM_016859 53414 Mm.472101 NM_016859 ENSMUSG00000023988 Bysl Bys|Enp1 bystin-like protein-coding common_peak2_40_225_0.141264302650238_7.89081111374031_0.565017988769576 chr3 59228556 59230059 + 0.565017988769576 NA intron (NM_177855, intron 16 of 43) intron (NM_177855, intron 16 of 43) -18425 NM_028808 74191 Mm.90067 NM_028808 ENSMUSG00000036362 P2ry13 2010001L06Rik|GPCR1|GPR94|Gpr86|P2Y13|P2yr13|SP174 purinergic receptor P2Y, G-protein coupled 13 protein-coding common_peak2_207_1761_0.0522599692795858_10.8091281935602_0.564671782558712 chr10 88402887 88407027 + 0.564671782558712 NA intron (NM_001004164, intron 2 of 20) B1_Mur2|SINE|Alu 25545 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak1_91_713_-0.0880948375628758_9.43573284524766_0.564624107181523 chr3 54692751 54693554 + 0.564624107181523 NA promoter-TSS (NM_019995) promoter-TSS (NM_019995) 47 NM_019995 56790 Mm.486375 NM_019995 ENSMUSG00000027751 Supt20 AA667204|AI450544|D3Ertd300e|Fam48a|Supt20h|p38IP suppressor of Ty 20 protein-coding common_peak1_60_438_-0.113557678488386_8.72129829029117_0.564551417147631 chr10 99241434 99242210 + 0.564551417147631 NA Intergenic Intergenic -21409 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_60_438_-0.113557678488386_8.72129829029117_0.564551417147631-2 chr2 37442525 37443314 + 0.564551417147631 NA promoter-TSS (NM_146121) promoter-TSS (NM_146121) 202 NM_199025 320633 Mm.383299 NM_199025 ENSMUSG00000050714 Zbtb26 A630026F21Rik zinc finger and BTB domain containing 26 protein-coding common_peak1_192_1604_0.0544477104365928_10.675581437228_0.564530665840707 chr16 33250492 33252267 + 0.564530665840707 NA promoter-TSS (NM_080557) promoter-TSS (NM_080557) -77 NM_080557 69150 Mm.28196 NM_080557 ENSMUSG00000022808 Snx4 1810036H14Rik|AI037066 sorting nexin 4 protein-coding common_peak2_45_314_-0.134134903107414_8.23214056683357_0.564513573715576 chr4 145214160 145216247 + 0.564513573715576 NA 3' UTR (NM_011610, exon 10 of 10) 3' UTR (NM_011610, exon 10 of 10) -20198 NM_001276465 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding common_peak1_45_314_-0.134134903107414_8.23214056683357_0.564513573715576 chr7 126792653 126793132 + 0.564513573715576 NA promoter-TSS (NM_019674) promoter-TSS (NM_019674) -421 NM_019674 56420 Mm.41998 NM_019674 ENSMUSG00000030697 Ppp4c 1110002D08Rik|AU016079|Ppx protein phosphatase 4, catalytic subunit protein-coding common_peak2_64_407_0.104489178361401_8.7246699311522_0.563928137334108 chr4 89549765 89551919 + 0.563928137334108 NA Intergenic Intergenic -137356 NM_175647 242523 Mm.130167 NM_175647 ENSMUSG00000043753 Dmrta1 Dmrt4 doublesex and mab-3 related transcription factor like family A1 protein-coding common_peak1_223_1932_0.0497757613657583_10.9415138028941_0.563905931171016 chr3 95282101 95283929 + 0.563905931171016 NA promoter-TSS (NM_173347) promoter-TSS (NM_173347) 80 NM_199475 75007 Mm.279287 NM_133858 ENSMUSG00000038712 Fam63a 1810005H09Rik|4930504E06Rik|AA562754|AA960384|AW561904|cI-40|mKIAA1390|ni family with sequence similarity 63, member A protein-coding common_peak1_140_1187_-0.0670535172214635_10.18079236219_0.563856200189779 chr5 118476583 118478223 + 0.563856200189779 NA Intergenic Intergenic -83316 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak1_48_338_-0.128265226225659_8.34100885002351_0.563833164251298 chr8 119777867 119778411 + 0.563833164251298 NA intron (NM_028883, intron 1 of 7) intron (NM_028883, intron 1 of 7) 277 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding common_peak1_261_2349_0.0452545315808663_11.2210723072428_0.563764693351503 chr12 84968581 84971597 + 0.563764693351503 NA promoter-TSS (NM_028632) promoter-TSS (NM_028632) 797 NM_178065 68497 Mm.24446 NM_178065 ENSMUSG00000042350 Arel1 1110018G07Rik|AI649076|AW610792|Kiaa0317|mKIAA0317 apoptosis resistant E3 ubiquitin protein ligase 1 protein-coding unique_peak2_25_125_0.178141321141015_7.06635058407042_0.563749017406449 chr3 127895651 127896494 + 0.563749017406449 NA exon (NM_027482, exon 1 of 2) exon (NM_027482, exon 1 of 2) 251 NM_027482 70617 Mm.317049 NM_027482 ENSMUSG00000050549 5730508B09Rik 2700063A17Rik|C80506 RIKEN cDNA 5730508B09 gene protein-coding common_peak2_25_125_0.178141321141015_7.06635058407042_0.563749017406449 chr13 107837293 107838370 + 0.563749017406449 NA intron (NM_145456, intron 2 of 14) intron (NM_145456, intron 2 of 14) 52233 NM_145456 67263 Mm.490418 NM_145456 ENSMUSG00000032846 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak1_25_125_0.178141321141015_7.06635058407042_0.563749017406449-2 chr2 150451034 150451533 + 0.563749017406449 NA intron (NM_001310645, intron 1 of 3) intron (NM_001310645, intron 1 of 3) 218 NM_001310645 668923 Mm.393876 NM_001177550 ENSMUSG00000068130 Zfp442 OTTMUSG00000015730|ZIPO-II zinc finger protein 442 protein-coding common_peak1_25_125_0.178141321141015_7.06635058407042_0.563749017406449 chr13 113073736 113074241 + 0.563749017406449 NA intron (NM_001281487, intron 6 of 11) intron (NM_001281487, intron 6 of 11) 26993 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak1_70_524_-0.103014066706468_8.98466657920025_0.56367394423592 chr19 41483099 41483889 + 0.56367394423592 NA Intergenic CpG -66145 NM_172154 212391 Mm.422910 NM_172154 ENSMUSG00000025019 Lcor 3110023F06Rik|A630025C20Rik|Mlr2|mKIAA1795 ligand dependent nuclear receptor corepressor protein-coding common_peak2_217_2004_-0.0510319746262908_10.9438705340291_0.5635054698641 chr15 98092206 98094556 + 0.5635054698641 NA 5' UTR (NM_144851, exon 1 of 18) 5' UTR (NM_144851, exon 1 of 18) 188 NM_144851 223870 Mm.384023 NM_144851 ENSMUSG00000033075 Senp1 2310046A20Rik|D15Ertd528e|E330036L07Rik|suPr-2 SUMO1/sentrin specific peptidase 1 protein-coding common_peak1_51_363_-0.125761084371408_8.44491409801299_0.563115442317729 chr19 8892633 8893521 + 0.563115442317729 NA promoter-TSS (NM_176843) promoter-TSS (NM_176843) 90 NM_176843 109077 Mm.290474 NM_176843 ENSMUSG00000071652 Ints5 1110055N21Rik|mKIAA1698 integrator complex subunit 5 protein-coding common_peak2_51_363_-0.125761084371408_8.44491409801299_0.563115442317729 chr7 4062288 4063980 + 0.563115442317729 NA promoter-TSS (NM_001113474) promoter-TSS (NM_001113474) 70 NM_001302677 52855 Mm.290880 NM_178611 ENSMUSG00000055541 Lair1 5133400O11Rik|BB115266|D7Bwg0421e|Lair-1 leukocyte-associated Ig-like receptor 1 protein-coding common_peak2_77_586_-0.0976609323158346_9.14838622695213_0.562992328408066 chr17 84465255 84466935 + 0.562992328408066 NA 5' UTR (NM_183021, exon 1 of 38) 5' UTR (NM_183021, exon 1 of 38) 113 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak1_27_176_-0.181040800065072_7.37708515005046_0.56281164495213-2 chr7 27232983 27233553 + 0.56281164495213 NA intron (NM_133770, intron 1 of 14) intron (NM_133770, intron 1 of 14) 255 NM_133770 76889 Mm.124728 NM_133770 ENSMUSG00000003762 Coq8b 0610012P18Rik|Adck4 coenzyme Q8B protein-coding common_peak1_27_176_-0.181040800065072_7.37708515005046_0.56281164495213 chr10 81139184 81139870 + 0.56281164495213 NA intron (NM_010731, intron 1 of 2) intron (NM_010731, intron 1 of 2) 3256 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak2_85_580_0.0899451280357759_9.22736691742242_0.562810644660513 chr6 67366593 67368864 + 0.562810644660513 NA intron (NM_008354, intron 1 of 15) RLTR11B|LTR|ERVK 8409 NM_008354 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak1_85_580_0.0899451280357759_9.22736691742242_0.562810644660513 chr3 105899839 105901040 + 0.562810644660513 NA intron (NM_027025, intron 1 of 6) intron (NM_027025, intron 1 of 6) -3982 NM_009631 11542 Mm.235024 NM_009631 ENSMUSG00000000562 Adora3 A3AR|A3R|AA3R|ARA3|Gpcr2 adenosine A3 receptor protein-coding unique_peak2_37_251_-0.15030340891667_7.90212821904158_0.56280701703349 chr9 44033161 44034568 + 0.56280701703349 NA Intergenic ORR1D1|LTR|ERVL-MaLR -9520 NM_009382 21838 Mm.3951 NM_009382 ENSMUSG00000032011 Thy1 CD90|T25|Thy-1|Thy-1.2|Thy1.1|Thy1.2 thymus cell antigen 1, theta protein-coding common_peak1_120_893_0.0724358234521301_9.84034893290938_0.562748943186599 chr4 119421683 119423208 + 0.562748943186599 NA promoter-TSS (NM_026494) promoter-TSS (NM_026494) -25 NM_026494 106564 Mm.27245 NM_026494 ENSMUSG00000028636 Ppcs 6330579B17Rik|AI413471|AI790434 phosphopantothenoylcysteine synthetase protein-coding common_peak2_43_247_0.132213743493432_8.02030318213359_0.562628374360251 chr6 117716343 117717127 + 0.562628374360251 NA intron (NR_045731, intron 2 of 3) RLTR45-int|LTR|ERVK 35034 NR_045731 72263 Mm.443289 NR_045731 ENSMUSG00000099869 1700030F04Rik - RIKEN cDNA 1700030F04 gene ncRNA common_peak1_35_190_0.153868845023275_7.65436325054739_0.562601610560261-3 chr4 137853312 137853950 + 0.562601610560261 NA Intergenic B1F|SINE|Alu -8606 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding common_peak1_35_190_0.153868845023275_7.65436325054739_0.562601610560261 chr1 191317848 191318362 + 0.562601610560261 NA promoter-TSS (NM_025424) promoter-TSS (NM_025424) 13 NM_025424 66208 Mm.46444 NM_025424 ENSMUSG00000037499 Nenf 1110060M21Rik|SCIRP10|Spuf neuron derived neurotrophic factor protein-coding common_peak1_35_190_0.153868845023275_7.65436325054739_0.562601610560261-2 chr13 108315658 108316366 + 0.562601610560261 NA promoter-TSS (NM_178683) promoter-TSS (NM_178683) -325 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak2_333_3178_0.0390016157363391_11.6538581090061_0.561992209228005 chr4 138971761 138974314 + 0.561992209228005 NA 5' UTR (NM_029857, exon 1 of 17) 5' UTR (NM_029857, exon 1 of 17) 132 NM_029857 77056 Mm.122336 NM_029857 ENSMUSG00000041143 Tmco4 4632413C14Rik|AI430825 transmembrane and coiled-coil domains 4 protein-coding common_peak2_159_1381_-0.0615707391984142_10.4017565307891_0.561866818895781 chr1 37429164 37431105 + 0.561866818895781 NA promoter-TSS (NM_026123) promoter-TSS (NM_026123) -31 NM_198006 76178 Mm.28085 NM_198006 ENSMUSG00000026112 Coa5 1700001A24Rik|6330578E17Rik|Pet191 cytochrome C oxidase assembly factor 5 protein-coding common_peak2_23_112_0.193596505676907_6.91697721525364_0.561642857803582-2 chr7 84151453 84152209 + 0.561642857803582 NA promoter-TSS (NM_133722) promoter-TSS (NM_133722) 62 NM_133722 70178 Mm.23914 NM_133722 ENSMUSG00000038459 Abhd17c 2210412D01Rik|AL023007|Fam108c|Fam108c1 abhydrolase domain containing 17C protein-coding common_peak2_23_112_0.193596505676907_6.91697721525364_0.561642857803582 chr3 152339899 152340768 + 0.561642857803582 NA promoter-TSS (NM_001162375) promoter-TSS (NM_001162375) 74 NM_001162375 215708 Mm.135018 NM_174868 ENSMUSG00000054942 Miga1 A930038D06|AI852168|C030011O14Rik|Fam73a|Mita1 mitoguardin 1 protein-coding unique_peak2_23_112_0.193596505676907_6.91697721525364_0.561642857803582-2 chr7 114439401 114440294 + 0.561642857803582 NA intron (NM_011055, intron 1 of 15) intron (NM_011055, intron 1 of 15) 24593 NM_011055 18576 Mm.430730 NM_011055 ENSMUSG00000030671 Pde3b 9830102A01Rik|AI847709 phosphodiesterase 3B, cGMP-inhibited protein-coding unique_peak2_23_112_0.193596505676907_6.91697721525364_0.561642857803582 chr1 93511988 93512722 + 0.561642857803582 NA intron (NM_145519, intron 1 of 26) intron (NM_145519, intron 1 of 26) 251 NM_145519 227377 Mm.243091 NM_145519 ENSMUSG00000034066 Farp2 AI465173|BC009153|D030026M03Rik|Fir|mKIAA0793 FERM, RhoGEF and pleckstrin domain protein 2 protein-coding common_peak1_46_269_0.126315490375186_8.13997334223842_0.561390937749987-2 chr9 90234041 90235216 + 0.561390937749987 NA intron (NM_194334, intron 3 of 12) intron (NM_194334, intron 3 of 12) 36141 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak1_46_269_0.126315490375186_8.13997334223842_0.561390937749987 chr16 13667464 13668107 + 0.561390937749987 NA intron (NM_028761, intron 1 of 23) intron (NM_028761, intron 1 of 23) 385 NM_028761 74108 Mm.182350 NM_028761 ENSMUSG00000022685 Parn 1200003I18Rik|DAN poly(A)-specific ribonuclease (deadenylation nuclease) protein-coding common_peak2_46_269_0.126315490375186_8.13997334223842_0.561390937749987 chr1 67038290 67039465 + 0.561390937749987 NA promoter-TSS (NM_021295) promoter-TSS (NM_021295) -5 NM_021295 14768 Mm.20522 NM_021295 ENSMUSG00000026000 Lancl1 AW124738|Gpr69|Gpr69a|p40 LanC (bacterial lantibiotic synthetase component C)-like 1 protein-coding common_peak1_89_615_0.0860044080560858_9.30978874472294_0.561339661028091 chr12 76962355 76963230 + 0.561339661028091 NA promoter-TSS (NM_001146176) promoter-TSS (NM_001146176) -544 NM_001146176 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak2_204_1730_0.0521588425771089_10.7834694306552_0.561313426103301 chr14 122106066 122108101 + 0.561313426103301 NA promoter-TSS (NR_015586) promoter-TSS (NR_015586) 1 NM_080556 68059 Mm.275191 NM_080556 ENSMUSG00000025544 Tm9sf2 1500001N15Rik|AA536814|D14Ertd64e|P76 transmembrane 9 superfamily member 2 protein-coding common_peak1_32_213_-0.164147038740267_7.65939346703101_0.56130541599492 chr10 41489863 41490597 + 0.56130541599492 NA promoter-TSS (NM_028430) promoter-TSS (NM_028430) 110 NM_009213 20598 Mm.953 NM_009213 ENSMUSG00000019822 Smpd2 AW108287|nSMase|nSMase1 sphingomyelin phosphodiesterase 2, neutral protein-coding common_peak1_30_157_0.162901456557203_7.3852314764557_0.561242206660537 chr9 123836130 123836821 + 0.561242206660537 NA intron (NM_001110253, intron 4 of 17) intron (NM_001110253, intron 4 of 17) 15186 NM_148925 17281 Mm.252941 NM_148925 ENSMUSG00000025241 Fyco1 2810409M01Rik|Mem2|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding common_peak2_164_1433_-0.0604037741627028_10.4556274216206_0.561192128742951 chr12 84761606 84764744 + 0.561192128742951 NA intron (NM_023409, intron 2 of 3) B4A|SINE|B4 9937 NM_023409 67963 Mm.282556 NM_023409 ENSMUSG00000021242 Npc2 2700012J19Rik|AA408070|AU045843|HE1 Niemann-Pick type C2 protein-coding common_peak2_165_1328_0.0599927910785301_10.4061217848154_0.561097558976683 chr3 68788496 68791779 + 0.561097558976683 NA Intergenic Intergenic -79449 NM_001167996 68725 Mm.45741 NM_001167996 ENSMUSG00000046999 1110032F04Rik AI115547 RIKEN cDNA 1110032F04 gene protein-coding common_peak2_49_291_0.122802944442723_8.25122603110138_0.561050091555969 chr17 87314505 87315975 + 0.561050091555969 NA intron (NM_028639, intron 5 of 19) intron (NM_028639, intron 5 of 19) 32354 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak1_240_2262_-0.0481693740122431_11.1199361822608_0.561023150046121 chr9 108306263 108307988 + 0.561023150046121 NA promoter-TSS (NM_133986) promoter-TSS (NM_133986) 328 NM_001313962 11848 Mm.757 NM_016802 ENSMUSG00000007815 Rhoa Arha|Arha1|Arha2 ras homolog family member A protein-coding common_peak1_285_2781_-0.0431040467734558_11.4203546811555_0.560974332706039 chr5 100037515 100040773 + 0.560974332706039 NA promoter-TSS (NR_027990) promoter-TSS (NR_027990) 78 NM_016690 50926 Mm.389579 NM_016690 ENSMUSG00000029328 Hnrnpdl AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|JKTBP|hnRNP DL|hnRNP-DL heterogeneous nuclear ribonucleoprotein D-like protein-coding common_peak1_64_472_-0.108781853006498_8.83130544683615_0.560662364730026 chr5 23843483 23844760 + 0.560662364730026 NA promoter-TSS (NM_025394) promoter-TSS (NM_025394) 24 NM_025394 66169 Mm.291868 NM_025394 ENSMUSG00000028998 Tomm7 1110020J08Rik|AW047273|Tom7 translocase of outer mitochondrial membrane 7 homolog (yeast) protein-coding common_peak1_96_759_-0.0845172449675378_9.52759698584718_0.560582463336767 chr6 122873752 122875128 + 0.560582463336767 NA promoter-TSS (NM_026267) promoter-TSS (NM_026267) -117 NM_026267 67602 Mm.288114 NM_026267 ENSMUSG00000030327 Necap1 1200016B17Rik|AI747569|mFLJ00061 NECAP endocytosis associated 1 protein-coding common_peak2_82_555_0.0905647964448413_9.16422347094593_0.560250702549784 chr4 124741102 124742580 + 0.560250702549784 NA promoter-TSS (NM_008385) promoter-TSS (NM_008385) -9 NM_008385 16330 Mm.296202 NM_008385 ENSMUSG00000028894 Inpp5b 5PTase|AW260155|INPP5P inositol polyphosphate-5-phosphatase B protein-coding common_peak1_281_2575_0.0429610366510396_11.3523973964401_0.560212916087419 chr3 95950439 95951885 + 0.560212916087419 NA Intergenic CpG 21905 NM_023210 66471 Mm.218657 NM_023210 ENSMUSG00000015749 Anp32e 2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding common_peak1_116_949_-0.0747057374571654_9.85443083448973_0.560203314399911 chr16 30510184 30511402 + 0.560203314399911 NA Intergenic CpG 39785 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding common_peak2_75_496_0.0964867842073165_9.00534543366594_0.560092201566071 chr16 13779717 13781385 + 0.560092201566071 NA promoter-TSS (NM_001039521) promoter-TSS (NM_001039521) -148 NM_001039521 106298 Mm.288606 NM_001039521 ENSMUSG00000022682 Rrn3 AL023001|E130302O19Rik|R75565|TIF-1A|Tif1a RRN3 RNA polymerase I transcription factor homolog (yeast) protein-coding common_peak2_104_834_-0.0800521566845962_9.66560630901912_0.55992685931826 chr11 72689508 72691067 + 0.55992685931826 NA intron (NM_009671, intron 1 of 24) CpG 285 NM_009671 11736 Mm.10313 NM_009671 ENSMUSG00000020790 Ankfy1 Ankhzn|ZFYVE14|mKIAA1255 ankyrin repeat and FYVE domain containing 1 protein-coding common_peak2_205_1740_0.0524597073119963_10.7919303413071_0.559844807269777 chr12 11265097 11267557 + 0.559844807269777 NA promoter-TSS (NM_177331) promoter-TSS (NM_177331) 441 NM_025695 67241 Mm.173953 NM_025695 ENSMUSG00000020608 Smc6 2810489L22Rik|3830418C19Rik|AA990493|AU018782|AW742439|SMC-6|Smc6l1|mKIAA4103 structural maintenance of chromosomes 6 protein-coding common_peak2_184_1644_-0.0559826305328723_10.6558805533562_0.559791740044086 chr11 69913190 69915101 + 0.559791740044086 NA promoter-TSS (NM_019726) promoter-TSS (NM_019726) -47 NM_019726 56310 Mm.477738 NM_019726 ENSMUSG00000023170 Gps2 AI505953 G protein pathway suppressor 2 protein-coding common_peak1_61_446_-0.110836505262656_8.74871276855199_0.559646406886817 chr11 67495301 67496167 + 0.559646406886817 NA Intergenic Intergenic -37264 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_101_720_0.0804276390729903_9.53406926877732_0.559531361588792 chr9 57589104 57590013 + 0.559531361588792 NA TTS (NM_022813) TTS (NM_022813) 106 NM_027895 71742 Mm.155877 NM_027895 ENSMUSG00000032308 Ulk3 1200015E14Rik unc-51-like kinase 3 protein-coding common_peak2_165_1443_-0.0597368465324664_10.4659866036209_0.559351967853158 chr2 29868312 29871208 + 0.559351967853158 NA intron (NM_207298, intron 1 of 11) intron (NM_207298, intron 1 of 11) 266 NM_207298 99151 Mm.296336 NM_207298 ENSMUSG00000039787 Cercam 2600006K01Rik|AL024097|Ceecam1 cerebral endothelial cell adhesion molecule protein-coding common_peak1_78_594_-0.0946467670819899_9.16942247465431_0.559349537611918 chr19 11965664 11966687 + 0.559349537611918 NA exon (NM_001033174, exon 1 of 14) exon (NM_001033174, exon 1 of 14) 331 NM_001033174 76303 Mm.291279 NM_001033174 ENSMUSG00000024687 Osbp 1110018F06Rik|AW559088|mKIAA4220 oxysterol binding protein protein-coding common_peak1_113_829_0.0741435045022438_9.73403927848541_0.559265079759148 chr14 34098865 34100453 + 0.559265079759148 NA intron (NM_001281845, intron 11 of 11) intron (NM_001281845, intron 11 of 11) 3095 NM_001251843 105518 Mm.246608 NM_001251843 ENSMUSG00000095493 A630023A22Rik AI461879 RIKEN cDNA A630023A22 gene protein-coding common_peak1_282_2586_0.0430777507580231_11.3586032140638_0.559126940956248 chr3 101602966 101604998 + 0.559126940956248 NA intron (NM_144900, intron 1 of 22) intron (NM_144900, intron 1 of 22) 725 NM_144900 11928 Mm.193670 NM_144900 ENSMUSG00000033161 Atp1a1 Atpa-1|BC010319 ATPase, Na+/K+ transporting, alpha 1 polypeptide protein-coding common_peak2_86_589_0.0882266864166485_9.24868448745753_0.558934330480271 chr3 89998055 89999733 + 0.558934330480271 NA promoter-TSS (NM_001282032) promoter-TSS (NM_001282032) 134 NR_045749 100503469 Mm.440636 NR_045749 ENSMUSG00000105552 Gm19710 - predicted gene, 19710 ncRNA unique_peak2_21_100_0.201586259942157_6.75900461272287_0.558625560805335-5 chr7 141443620 141444441 + 0.558625560805335 NA promoter-TSS (NM_022654) promoter-TSS (NM_022654) -675 NM_022654 57913 Mm.334321 NM_022654 ENSMUSG00000025507 Pidd1 1200011D09Rik|AU042446|Lrdd|Pidd p53 induced death domain protein 1 protein-coding unique_peak2_21_100_0.201586259942157_6.75900461272287_0.558625560805335-3 chr17 33817224 33818247 + 0.558625560805335 NA exon (NM_030697, exon 3 of 11) exon (NM_030697, exon 3 of 11) 6763 NM_016844 54127 Mm.352374 NM_016844 ENSMUSG00000067288 Rps28 - ribosomal protein S28 protein-coding unique_peak2_21_100_0.201586259942157_6.75900461272287_0.558625560805335-4 chr2 168582826 168583750 + 0.558625560805335 NA intron (NM_001291172, intron 1 of 6) intron (NM_001291172, intron 1 of 6) 7077 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding unique_peak2_21_100_0.201586259942157_6.75900461272287_0.558625560805335 chr1 165682102 165682991 + 0.558625560805335 NA intron (NM_178593, intron 1 of 6) intron (NM_178593, intron 1 of 6) 25548 NM_178593 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding unique_peak2_21_100_0.201586259942157_6.75900461272287_0.558625560805335-2 chr13 62558038 62558851 + 0.558625560805335 NA intron (NM_175252, intron 1 of 6) intron (NM_175252, intron 1 of 6) 155 NM_175252 77117 Mm.470091 NM_175252 ENSMUSG00000074865 Zfp934 6720457D02Rik zinc finger protein 934 protein-coding common_peak1_156_1350_-0.0623363249200359_10.3686437968657_0.55860362281304 chr15 34442324 34443901 + 0.55860362281304 NA 5' UTR (NM_009083, exon 1 of 4) 5' UTR (NM_009083, exon 1 of 4) 113 NM_009083 19946 Mm.358632 NM_009083 ENSMUSG00000058600 Rpl30 - ribosomal protein L30 protein-coding common_peak2_147_1257_-0.0639079332951642_10.2649622402317_0.55844959582659 chr5 115157093 115159340 + 0.55844959582659 NA promoter-TSS (NM_175403) promoter-TSS (NM_175403) -40 NM_175403 109154 Mm.153963 NM_175403 ENSMUSG00000048578 Mlec 2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152 malectin protein-coding common_peak2_58_421_-0.11557278366536_8.66331279687451_0.558402801056136 chr10 61381384 61383883 + 0.558402801056136 NA intron (NM_013753, intron 1 of 19) intron (NM_013753, intron 1 of 19) 890 NM_013753 27355 Mm.269699 NM_013753 ENSMUSG00000020092 Pald1 MMPAL|Pald|mKIAA1274 phosphatase domain containing, paladin 1 protein-coding unique_peak2_58_421_-0.11557278366536_8.66331279687451_0.558402801056136 chr3 51660675 51663108 + 0.558402801056136 NA intron (NM_001310482, intron 1 of 3) intron (NM_001310482, intron 1 of 3) 712 NM_001310482 211666 Mm.24679 NM_174995 ENSMUSG00000074604 Mgst2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding common_peak2_55_395_-0.116179558875329_8.57126684064195_0.558244865953087 chr1 171676517 171678350 + 0.558244865953087 NA Intergenic MLTR14|LTR|ERV1 -4622 NM_007649 12506 Mm.1738 NM_007649 ENSMUSG00000015355 Cd48 AI449234|AW610730|BCM1|BLAST|BLAST-1|BLAST1|Bcm-1|MEM-102|SLAMF2|Sgp-60 CD48 antigen protein-coding common_peak1_25_162_-0.193306909590145_7.252074699436_0.558213385818545 chr19 46679548 46680210 + 0.558213385818545 NA Intergenic Intergenic -6879 NM_007809 13074 Mm.1262 NM_007809 ENSMUSG00000003555 Cyp17a1 Cyp17|p450c17 cytochrome P450, family 17, subfamily a, polypeptide 1 protein-coding common_peak1_25_162_-0.193306909590145_7.252074699436_0.558213385818545-2 chr5 114771907 114772419 + 0.558213385818545 NA intron (NM_019834, intron 1 of 18) intron (NM_019834, intron 1 of 18) 1328 NM_019834 26431 Mm.195632 NM_019834 ENSMUSG00000041890 Git2 1500036H07Rik|5830420E16Rik|6430510B20Rik|9630056M03Rik|B230104M05Rik|CAT2|mKIAA0148 G protein-coupled receptor kinase-interactor 2 protein-coding common_peak1_25_162_-0.193306909590145_7.252074699436_0.558213385818545-3 chr5 121197964 121198562 + 0.558213385818545 NA Intergenic (TTAG)n|Simple_repeat|Simple_repeat -6238 NM_011290 19988 Mm.262021 NM_011290 ENSMUSG00000029614 Rpl6 Taxreb107 ribosomal protein L6 protein-coding unique_peak2_25_162_-0.193306909590145_7.252074699436_0.558213385818545 chr19 43193016 43194103 + 0.558213385818545 NA intron (NM_001081257, intron 3 of 11) AmnSINE1|SINE|Deu 194796 NM_001081257 545291 Mm.442200 NM_001081257 ENSMUSG00000074852 Hpse2 Gm968|Hpa2 heparanase 2 protein-coding common_peak1_25_162_-0.193306909590145_7.252074699436_0.558213385818545-4 chrX 48449498 48450093 + 0.558213385818545 NA intron (NM_019680, intron 1 of 8) intron (NM_019680, intron 1 of 8) 13337 NM_019680 56501 Mm.36808 NM_019680 ENSMUSG00000031103 Elf4 AV314029|BC042423|ENSMUSG00000053512|Gm9907|Mef E74-like factor 4 (ets domain transcription factor) protein-coding common_peak2_148_1160_0.0637727452420549_10.2130386294866_0.558095870925487 chr5 45856439 45858263 + 0.558095870925487 NA promoter-TSS (NM_172153) promoter-TSS (NM_172153) 189 NM_178142 209707 Mm.71498 NM_172153 ENSMUSG00000015882 Lcorl Mlr1 ligand dependent nuclear receptor corepressor-like protein-coding common_peak1_186_1542_0.05539532753129_10.6192200103364_0.557963398863455 chr3 158035697 158037261 + 0.557963398863455 NA promoter-TSS (NM_024194) promoter-TSS (NM_024194) 160 NM_001093752 69207 Mm.223946 NM_026989 ENSMUSG00000055436 Srsf11 0610009J05Rik|2610019N13Rik|BF642805|Sfrs11 serine/arginine-rich splicing factor 11 protein-coding common_peak1_52_370_-0.11953361117769_8.47550857103196_0.557951935120623 chr2 118388380 118389331 + 0.557951935120623 NA promoter-TSS (NM_001177806) promoter-TSS (NM_001177806) 238 NM_013719 27103 Mm.217616 NM_013719 ENSMUSG00000005102 Eif2ak4 2610011M03|GCN2|MGCN2 eukaryotic translation initiation factor 2 alpha kinase 4 protein-coding common_peak2_52_370_-0.11953361117769_8.47550857103196_0.557951935120623 chr2 58134623 58136916 + 0.557951935120623 NA intron (NM_139200, intron 7 of 7) L1Md_F2|LINE|L1 24353 NM_139200 227929 Mm.273905 NM_139200 ENSMUSG00000026832 Cytip A130053M09Rik|AI462064|C80816|Cbp|Cybr|Pscdbp cytohesin 1 interacting protein protein-coding common_peak2_93_731_-0.0859564396716674_9.47272161844821_0.557944264148851 chr5 115559353 115560428 + 0.557944264148851 NA intron (NM_007475, intron 2 of 6) CpG-11412 423 NM_007475 11837 Mm.5286 NM_007475 ENSMUSG00000067274 Rplp0 36B4|Arbp|L10E ribosomal protein, large, P0 protein-coding common_peak2_161_1402_-0.0613448994406642_10.4236268438996_0.557878201678709 chr18 36698841 36702952 + 0.557878201678709 NA Intergenic Intergenic -4971 NM_172831 240216 Mm.252323 NM_172831 ENSMUSG00000044719 E230025N22Rik EG240216 Riken cDNA E230025N22 gene protein-coding common_peak1_79_530_0.0917907991993356_9.09846345040382_0.557848837775154 chr3 84679184 84680279 + 0.557848837775154 NA intron (NM_177260, intron 1 of 6) intron (NM_177260, intron 1 of 6) 13539 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding common_peak2_330_3318_-0.0391406694162306_11.6769625793702_0.557847169906856 chr15 84922139 84925354 + 0.557847169906856 NA intron (NM_016714, intron 1 of 7) CpG 318 NM_016714 18141 Mm.28379 NM_016714 ENSMUSG00000016619 Nup50 1700030K07Rik|AI413123|Npap60 nucleoporin 50 protein-coding common_peak1_62_391_0.106899315836575_8.66815950203349_0.557769350113719 chr4 33310262 33311011 + 0.557769350113719 NA intron (NM_011884, intron 1 of 15) CpG 325 NM_001305273 24018 Mm.240024 NM_011884 ENSMUSG00000028274 Rngtt AU020997|HCE|MCE1 RNA guanylyltransferase and 5'-phosphatase protein-coding common_peak2_68_506_-0.103246616756547_8.93421862862507_0.557750648990812 chr17 30102773 30104979 + 0.557750648990812 NA intron (NM_148926, intron 2 of 4) intron (NM_148926, intron 2 of 4) 98789 NM_148926 21769 Mm.220972 NM_148926 ENSMUSG00000044477 Zfand3 AW539211|TEG-27|Tex27 zinc finger, AN1-type domain 3 protein-coding common_peak2_68_506_-0.103246616756547_8.93421862862507_0.557750648990812-2 chr4 144899881 144902508 + 0.557750648990812 NA intron (NM_011303, intron 1 of 5) intron (NM_011303, intron 1 of 5) 8057 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_68_506_-0.103246616756547_8.93421862862507_0.557750648990812 chr4 154011510 154012596 + 0.557750648990812 NA exon (NM_201226, exon 1 of 7) exon (NM_201226, exon 1 of 7) 250 NM_201226 72946 Mm.260690 NM_201226 ENSMUSG00000029028 Lrrc47 2900010D03Rik|AA960559|mKIAA1185 leucine rich repeat containing 47 protein-coding common_peak1_13_55_0.252597516773966_5.93365368044459_0.557749827489198-4 chr4 6447575 6447958 + 0.557749827489198 NA intron (NM_010945, intron 1 of 30) intron (NM_010945, intron 1 of 30) 6505 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding common_peak1_13_55_0.252597516773966_5.93365368044459_0.557749827489198 chr1 30892175 30892532 + 0.557749827489198 NA Intergenic ORR1F|LTR|ERVL-MaLR -29097 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik|mKIAA0244 PHD finger protein 3 protein-coding unique_peak2_11_67_-0.3002996843446_5.93731299907804_0.557749827489198 chr1 191062452 191062918 + 0.557749827489198 NA promoter-TSS (NM_198654) promoter-TSS (NM_198654) 247 NM_001163421 68972 Mm.237188 NM_026895 ENSMUSG00000026632 Tatdn3 1500010M24Rik TatD DNase domain containing 3 protein-coding common_peak1_13_55_0.252597516773966_5.93365368044459_0.557749827489198-5 chr4 133157605 133158010 + 0.557749827489198 NA intron (NM_153423, intron 1 of 8) B1_Mur2|SINE|Alu 27174 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak1_13_55_0.252597516773966_5.93365368044459_0.557749827489198-2 chr11 16986429 16986732 + 0.557749827489198 NA intron (NM_019549, intron 6 of 9) intron (NM_019549, intron 6 of 9) 22138 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding unique_peak2_11_67_-0.3002996843446_5.93731299907804_0.557749827489198-2 chr6 117920552 117921132 + 0.557749827489198 NA intron (NM_133834, intron 3 of 3) B2_Mm2|SINE|B2 3548 NM_001166427 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_13_55_0.252597516773966_5.93365368044459_0.557749827489198-6 chr8 84990706 84990958 + 0.557749827489198 NA intron (NM_001167991, intron 1 of 21) intron (NM_001167991, intron 1 of 21) 237 NM_001167991 170833 Mm.247775 NM_133255 ENSMUSG00000052566 Hook2 A630054I03Rik hook microtubule tethering protein 2 protein-coding common_peak1_13_55_0.252597516773966_5.93365368044459_0.557749827489198-3 chr2 23006621 23006912 + 0.557749827489198 NA intron (NM_001077190, intron 1 of 10) RSINE1|SINE|B4 33475 NM_001077192 11308 Mm.205647 NM_007380 ENSMUSG00000058835 Abi1 E3B1|NAP1|Ssh3bp1|abi-1 abl-interactor 1 protein-coding common_peak1_295_2735_0.041768069884581_11.4387365498282_0.557696111937209 chr2 156311350 156313283 + 0.557696111937209 NA promoter-TSS (NM_027585) promoter-TSS (NM_027585) -157 NM_027585 70873 Mm.475234 NM_027585 ENSMUSG00000038085 Cnbd2 4921517L17Rik|5430421B09Rik|Cris cyclic nucleotide binding domain containing 2 protein-coding common_peak2_49_346_-0.12616434925552_8.3757096779505_0.557496753534527 chr2 32693575 32694828 + 0.557496753534527 NA promoter-TSS (NM_010236) promoter-TSS (NM_010236) -26 NM_010236 14287 Mm.3830 NM_010236 ENSMUSG00000009566 Fpgs AA408187 folylpolyglutamyl synthetase protein-coding common_peak1_271_2617_-0.0442638762256458_11.3321174438324_0.557270144978257 chr14 46820816 46822833 + 0.557270144978257 NA intron (NM_022023, intron 1 of 6) intron (NM_022023, intron 1 of 6) 418 NM_022023 63985 Mm.87312 NM_022023 ENSMUSG00000062014 Gmfb 3110001H22Rik|3110001O16Rik|AI851627|C79176|D14Ertd630e glia maturation factor, beta protein-coding common_peak1_19_88_0.215400796664379_6.58343382929859_0.557095317016001-5 chr7 102318387 102318810 + 0.557095317016001 NA intron (NM_009287, intron 1 of 11) L1_Mus2|LINE|L1 50774 NM_009287 20866 Mm.645 NM_009287 ENSMUSG00000030987 Stim1 SIM stromal interaction molecule 1 protein-coding common_peak2_19_88_0.215400796664379_6.58343382929859_0.557095317016001 chr5 107926618 107927402 + 0.557095317016001 NA intron (NM_026062, intron 1 of 4) Lx9|LINE|L1 26482 NM_016980 100503670 Mm.277897 NM_016980 ENSMUSG00000058558 Rpl5 U21RNA ribosomal protein L5 protein-coding unique_peak2_19_88_0.215400796664379_6.58343382929859_0.557095317016001 chr1 106677931 106678760 + 0.557095317016001 NA intron (NM_009741, intron 1 of 1) L1MB3|LINE|L1 35945 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak1_19_88_0.215400796664379_6.58343382929859_0.557095317016001 chr10 37263645 37263917 + 0.557095317016001 NA Intergenic (CATTC)n|Simple_repeat|Simple_repeat -124855 NM_008538 17118 Mm.30059 NM_008538 ENSMUSG00000069662 Marcks Macs|PKCSL myristoylated alanine rich protein kinase C substrate protein-coding common_peak1_19_88_0.215400796664379_6.58343382929859_0.557095317016001-2 chr11 77196410 77196817 + 0.557095317016001 NA Intergenic RSINE1|SINE|B4 -7645 NM_176965 319634 Mm.108786 NM_176965 ENSMUSG00000050944 Efcab5 4930563A03Rik EF-hand calcium binding domain 5 protein-coding common_peak1_19_88_0.215400796664379_6.58343382929859_0.557095317016001-3 chr13 52619345 52619677 + 0.557095317016001 NA intron (NM_001198977, intron 3 of 13) intron (NM_001198977, intron 3 of 13) 22629 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding common_peak1_19_88_0.215400796664379_6.58343382929859_0.557095317016001-4 chr2 25982777 25983151 + 0.557095317016001 NA 5' UTR (NM_001276361, exon 1 of 18) 5' UTR (NM_001276361, exon 1 of 18) 318 NM_001276360 227634 Mm.36834 NM_001115076 ENSMUSG00000026933 Camsap1 9530003A05Rik|C77823|PRO2405 calmodulin regulated spectrin-associated protein 1 protein-coding common_peak1_105_843_-0.0787451120777174_9.68172663266833_0.557088086079634 chr6 88517945 88518906 + 0.557088086079634 NA exon (NM_016906, exon 2 of 12) exon (NM_016906, exon 2 of 12) 375 NM_016906 53421 Mm.28375 NM_016906 ENSMUSG00000030082 Sec61a1 AA408394|AA410007|Sec61a Sec61 alpha 1 subunit (S. cerevisiae) protein-coding common_peak1_28_144_0.168754224497634_7.26428620226375_0.556535772571143 chr14 67188671 67189197 + 0.556535772571143 NA Intergenic Intergenic -44358 NM_010095 13592 Mm.319947 NM_010095 ENSMUSG00000022053 Ebf2 D14Ggc1e|EBF-2|Mmot1|O/E-3|OE-3 early B cell factor 2 protein-coding common_peak1_28_144_0.168754224497634_7.26428620226375_0.556535772571143-3 chr5 138255024 138255597 + 0.556535772571143 NA promoter-TSS (NM_001081108) promoter-TSS (NM_001081108) -172 NM_001081108 66096 Mm.206901 NM_001081108 ENSMUSG00000050552 Lamtor4 0910001L09Rik|AV006840 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 protein-coding unique_peak2_28_144_0.168754224497634_7.26428620226375_0.556535772571143 chr18 20970679 20971931 + 0.556535772571143 NA intron (NM_026301, intron 1 of 5) intron (NM_026301, intron 1 of 5) 26680 NM_026301 67664 Mm.45980 NM_026301 ENSMUSG00000033107 Rnf125 4930553F04Rik ring finger protein 125 protein-coding common_peak1_28_144_0.168754224497634_7.26428620226375_0.556535772571143-2 chr5 64483020 64483637 + 0.556535772571143 NA TTS (NR_045412) TTS (NR_045412) 6320 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA unique_peak2_30_198_-0.169942415809342_7.55165341263898_0.556528789585259 chr10 108138988 108140409 + 0.556528789585259 NA Intergenic ORR1A4|LTR|ERVL-MaLR -22702 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding unique_peak2_33_177_0.154415141194129_7.55294100156346_0.556528789585259 chr1 160023947 160025178 + 0.556528789585259 NA Intergenic Intergenic -19818 NR_028111 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding common_peak2_30_198_-0.169942415809342_7.55165341263898_0.556528789585259 chr9 116188663 116189845 + 0.556528789585259 NA Intergenic Intergenic -13891 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding unique_peak2_33_177_0.154415141194129_7.55294100156346_0.556528789585259-2 chr9 22653735 22654715 + 0.556528789585259 NA intron (NM_181316, intron 14 of 21) Lx9|LINE|L1 178510 NM_178415 319845 Mm.176725 NM_178415 ENSMUSG00000035919 Bbs9 E130103I17Rik Bardet-Biedl syndrome 9 (human) protein-coding common_peak1_86_666_-0.0887451205187322_9.33717039092522_0.556506447122043 chr10 75325278 75326802 + 0.556506447122043 NA exon (NM_009630, exon 2 of 3) exon (NM_009630, exon 2 of 3) 9163 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak2_86_666_-0.0887451205187322_9.33717039092522_0.556506447122043 chr5 148928002 148929498 + 0.556506447122043 NA promoter-TSS (NM_153572) promoter-TSS (NM_153572) -103 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak2_41_233_0.13372223540145_7.93722583728413_0.556390952248245 chr10 95020732 95022192 + 0.556390952248245 NA Intergenic L1M5|LINE|L1 -76884 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding common_peak1_41_233_0.13372223540145_7.93722583728413_0.556390952248245 chrX 7318702 7319410 + 0.556390952248245 NA intron (NM_001243762, intron 1 of 13) CpG 302 NM_001243762 12728 Mm.486257 NM_016691 ENSMUSG00000004317 Clcn5 5430408K11Rik|ClC-5|Clc4-1|Clc5|Clcn4-1|D930009B12Rik|DXImx42e|Sfc13|T25545 chloride channel, voltage-sensitive 5 protein-coding common_peak1_182_1501_0.0559848696859842_10.5806615323573_0.556346815171226 chr10 80140509 80143020 + 0.556346815171226 NA promoter-TSS (NM_025313) promoter-TSS (NM_025313) -551 NM_025313 66043 Mm.278560 NM_025313 ENSMUSG00000003072 Atp5d 0610008F14Rik|1500000I11Rik|AA960090|AI876556|AU020773|C85518 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit protein-coding common_peak2_139_1176_-0.0662282681421988_10.1677844709673_0.556341374676726 chr18 49831614 49833607 + 0.556341374676726 NA promoter-TSS (NM_001081371) promoter-TSS (NM_001081371) -387 NM_001081371 240283 Mm.257790 NM_001081371 ENSMUSG00000037416 Dmxl1 C630007L23Rik|D030030C22 Dmx-like 1 protein-coding common_peak2_59_368_0.107791737723664_8.58137287492223_0.556229092881342 chr5 143817221 143818545 + 0.556229092881342 NA Intergenic CpG -53979 NM_013557 15467 Mm.389709 NM_013557 ENSMUSG00000029613 Eif2ak1 HCR|Hri eukaryotic translation initiation factor 2 alpha kinase 1 protein-coding common_peak2_69_447_0.100703103652286_8.85770647388375_0.556179204483449 chr14 55899216 55900984 + 0.556179204483449 NA intron (NM_001082975, intron 1 of 5) intron (NM_001082975, intron 1 of 5) 132 NM_001082975 654795 Mm.486218 NM_001082975 ENSMUSG00000022223 Sdr39u1 2310014G06Rik short chain dehydrogenase/reductase family 39U, member 1 protein-coding common_peak1_23_147_-0.195677897536855_7.11161441686052_0.556122985507757 chr5 93263355 93263800 + 0.556122985507757 NA Intergenic Intergenic -3996 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding unique_peak2_23_147_-0.195677897536855_7.11161441686052_0.556122985507757 chr4 40229891 40230987 + 0.556122985507757 NA intron (NM_172689, intron 2 of 17) B3|SINE|B2 9386 NM_172689 230073 Mm.86382 NM_172689 ENSMUSG00000040296 Ddx58 6430573D20Rik|C330021E21|RIG-I|RLR-1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 protein-coding common_peak2_23_147_-0.195677897536855_7.11161441686052_0.556122985507757 chr5 64599564 64600551 + 0.556122985507757 NA intron (NR_045078, intron 3 of 3) intron (NR_045078, intron 3 of 3) 10642 NR_045078 100042198 Mm.25191 NR_045078 ENSMUSG00000105402 Gm3716 Gm1683 predicted gene 3716 ncRNA common_peak2_44_254_0.131825200705774_8.06026603721175_0.555752008200954 chr5 114941795 114942855 + 0.555752008200954 NA exon (NM_028211, exon 1 of 6) exon (NM_028211, exon 1 of 6) 123 NM_028211 72357 Mm.292672 NM_028211 ENSMUSG00000029559 2210016L21Rik - RIKEN cDNA 2210016L21 gene protein-coding common_peak1_44_254_0.131825200705774_8.06026603721175_0.555752008200954 chr18 4921434 4922179 + 0.555752008200954 NA Intergenic CpG 109320 NR_045881 100038439 Mm.387569 NR_045881 ENSMUSG00000097043 Gm10556 ENSMUSG00000073646 predicted gene 10556 ncRNA common_peak2_76_505_0.093727966078756_9.02985755773369_0.555628201660363 chr7 120842259 120844687 + 0.555628201660363 NA promoter-TSS (NM_001267710) promoter-TSS (NM_001267710) -127 NM_001267710 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak2_296_2910_-0.0417101441553172_11.4864440520451_0.555499802222865 chr1 86260876 86266158 + 0.555499802222865 NA intron (NM_001310702, intron 23 of 24) intron (NM_001310702, intron 23 of 24) -39704 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak1_229_1998_0.0481159454135565_10.9891207294514_0.55536890469196 chrX 140540885 140544013 + 0.55536890469196 NA intron (NM_001077364, intron 2 of 3) intron (NM_001077364, intron 2 of 3) 219 NR_122039 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding common_peak1_153_1319_-0.0629883622863936_10.3348280331026_0.555354443911146 chr6 31192222 31193870 + 0.555354443911146 NA intron (NR_110470, intron 1 of 2) intron (NR_110470, intron 1 of 2) 25428 NR_110470 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak1_38_258_-0.143864838078694_7.94487586864721_0.555352073288364 chr2 158360838 158361453 + 0.555352073288364 NA non-coding (NR_015463, exon 2 of 6) non-coding (NR_015463, exon 2 of 6) 364 NR_015463 68108 Mm.119198 NR_015463 Snhg17 9430008C03Rik small nucleolar RNA host gene 17 ncRNA common_peak2_358_3660_-0.0369289590570308_11.819557578776_0.55531664171466 chr7 101969239 101972272 + 0.55531664171466 NA intron (NM_133947, intron 1 of 24) intron (NM_133947, intron 1 of 24) 912 NM_133947 101706 Mm.27259 NM_133947 ENSMUSG00000066306 Numa1 6720401E04Rik|AA764025|AL022610|AU014979|NuMA nuclear mitotic apparatus protein 1 protein-coding common_peak2_47_276_0.126645613229263_8.17706497266382_0.555080305438706 chr3 133331870 133333299 + 0.555080305438706 NA intron (NM_001293641, intron 5 of 11) intron (NM_001293641, intron 5 of 11) 22474 NM_146141 74776 Mm.210305 NM_146141 ENSMUSG00000028013 Ppa2 1110013G13Rik|Sid6306 pyrophosphatase (inorganic) 2 protein-coding common_peak2_47_276_0.126645613229263_8.17706497266382_0.555080305438706-2 chr5 64092505 64093614 + 0.555080305438706 NA exon (NM_025700, exon 1 of 14) exon (NM_025700, exon 1 of 14) 109 NM_025700 66681 Mm.2325 NM_025700 ENSMUSG00000029171 Pgm1 3230402E02Rik|Pgm-1|Pgm2 phosphoglucomutase 1 protein-coding common_peak2_47_276_0.126645613229263_8.17706497266382_0.555080305438706-3 chr6 30229331 30231353 + 0.555080305438706 NA intron (NM_001169576, intron 3 of 4) ORR1E|LTR|ERVL-MaLR 13461 NM_001169577 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak1_182_1622_-0.0557933173477156_10.6365506258741_0.55489564136973 chr5 145230890 145232423 + 0.55489564136973 NA promoter-TSS (NM_001083958) promoter-TSS (NM_001083958) -59 NM_001083958 72611 Mm.206555 NM_028298 ENSMUSG00000007812 Zfp655 2700038I16Rik|9030409O18Rik|mKIAA4222 zinc finger protein 655 protein-coding common_peak2_136_1045_0.0656704202879173_10.0635023463909_0.554729764376028 chr16 17110227 17112183 + 0.554729764376028 NA promoter-TSS (NM_001252445) promoter-TSS (NM_001252445) 47 NM_001252445 66053 Mm.253614 NM_144954 ENSMUSG00000022771 Ppil2 0610009L05Rik|1700016N17Rik|4921520K19Rik|4930511F14Rik|AA589416|C130078A06Rik|CYC4 peptidylprolyl isomerase (cyclophilin)-like 2 protein-coding common_peak1_17_77_0.219283143010419_6.39504379036746_0.554662476768468 chr11 98907717 98908258 + 0.554662476768468 NA promoter-TSS (NM_011799) promoter-TSS (NM_011799) 98 NM_001025779 23834 Mm.20912 NM_011799 ENSMUSG00000017499 Cdc6 CDC18L cell division cycle 6 protein-coding unique_peak2_17_77_0.219283143010419_6.39504379036746_0.554662476768468-2 chr3 88441205 88441813 + 0.554662476768468 NA promoter-TSS (NR_105978) promoter-TSS (NR_105978) -558 NR_105978 102465611 NR_105978 ENSMUSG00000098655 Mir7011 Gm27677|mmu-mir-7011 microRNA 7011 ncRNA unique_peak2_17_77_0.219283143010419_6.39504379036746_0.554662476768468 chr19 46573364 46573914 + 0.554662476768468 NA promoter-TSS (NM_019718) promoter-TSS (NM_019718) 274 NM_053196 94279 Mm.296837 NM_053196 ENSMUSG00000025036 Sfxn2 C79732|F630107H02Rik sideroflexin 2 protein-coding common_peak1_17_77_0.219283143010419_6.39504379036746_0.554662476768468-2 chr17 83824000 83824424 + 0.554662476768468 NA Intergenic Intergenic 22578 NM_025325 107766 Mm.30100 NM_025325 ENSMUSG00000000673 Haao 0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding common_peak1_235_2063_0.0475237719912851_11.0349891414189_0.554621711673316 chr18 38296411 38298840 + 0.554621711673316 NA intron (NM_001164621, intron 2 of 9) intron (NM_001164621, intron 2 of 9) 820 NM_001164621 56736 Mm.228903 NM_020012 ENSMUSG00000060450 Rnf14 2310075C09Rik|2610005D23Rik|AA986456|AU041447|D18Ertd188e|D7Bwg0165e|Triad2 ring finger protein 14 protein-coding common_peak2_15_66_0.230164072667396_6.18117122679147_0.554459000578111 chr15 83510548 83510958 + 0.554459000578111 NA 5' UTR (NM_178869, exon 1 of 12) 5' UTR (NM_178869, exon 1 of 12) 154 NM_178869 319953 Mm.235007 NM_178869 ENSMUSG00000022442 Ttll1 6330444E16Rik|AV014541 tubulin tyrosine ligase-like 1 protein-coding unique_peak2_15_66_0.230164072667396_6.18117122679147_0.554459000578111 chr16 78556152 78556815 + 0.554459000578111 NA intron (NM_025967, intron 2 of 4) ORR1A2|LTR|ERVL-MaLR -3833 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak1_15_66_0.230164072667396_6.18117122679147_0.554459000578111 chr2 129066031 129066374 + 0.554459000578111 NA exon (NM_027192, exon 1 of 7) exon (NM_027192, exon 1 of 7) 255 NM_027192 69737 Mm.33909 NM_027192 ENSMUSG00000027394 Ttl 2410003M22Rik|2700049H19Rik|AI848570 tubulin tyrosine ligase protein-coding common_peak1_405_4249_-0.0344353909480315_12.0360294304384_0.554430328243922 chr18 65800081 65803583 + 0.554430328243922 NA intron (NM_025468, intron 1 of 5) intron (NM_025468, intron 1 of 5) 1254 NM_025468 66286 Mm.27800 NM_025468 ENSMUSG00000024516 Sec11c 1810029G24Rik|Sec11l3 SEC11 homolog C, signal peptidase complex subunit protein-coding common_peak2_159_1269_0.0603583795303155_10.3407919714247_0.554373484892431 chr11 11733327 11738301 + 0.554373484892431 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 45637 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_329_3132_0.0387087913545034_11.6326834500483_0.553954419926225 chr4 138971918 138974025 + 0.553954419926225 NA promoter-TSS (NM_029857) promoter-TSS (NM_029857) 66 NM_029857 77056 Mm.122336 NM_029857 ENSMUSG00000041143 Tmco4 4632413C14Rik|AI430825 transmembrane and coiled-coil domains 4 protein-coding common_peak2_83_639_-0.0912288287161509_9.27631368052929_0.553941054692907 chr11 101424425 101425919 + 0.553941054692907 NA promoter-TSS (NM_172566) promoter-TSS (NM_172566) 87 NM_172566 217201 Mm.305941 NM_172566 ENSMUSG00000035007 Rundc1 AW125546|D930024B17 RUN domain containing 1 protein-coding common_peak1_69_514_-0.10037059636069_8.95824332389024_0.553616698585563 chr17 78246381 78247786 + 0.553616698585563 NA intron (NM_015800, intron 2 of 16) intron (NM_015800, intron 2 of 16) 46835 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding common_peak2_374_3672_0.0355121144363295_11.8604992379498_0.5535720742678 chr14 53957544 53962600 + 0.5535720742678 NA Intergenic B4|SINE|B4 293857 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_427_4529_-0.0331002932051145_12.128745188331_0.553290908723572 chr10 80016609 80020036 + 0.553290908723572 NA intron (NM_001142701, intron 2 of 22) (GAAA)n|Simple_repeat|Simple_repeat -1353 NM_027521 70719 Mm.243954 NM_027521 ENSMUSG00000035697 Hmha1 6330406L22Rik|AW539505|Ha-1 histocompatibility (minor) HA-1 protein-coding common_peak1_21_133_-0.206291447763821_6.96294346657586_0.55325648810194 chr8 68793956 68794351 + 0.55325648810194 NA intron (NM_001293791, intron 1 of 17) CpG 224 NM_001293792 70885 Mm.252421 NM_027590 ENSMUSG00000031864 Ints10 4921521J11Rik|AI462004 integrator complex subunit 10 protein-coding common_peak2_76_576_-0.0957059678724157_9.12457452470927_0.553244737499243 chr16 4623965 4625461 + 0.553244737499243 NA intron (NM_025571, intron 1 of 4) CpG 233 NM_025571 66449 Mm.354760 NM_025571 ENSMUSG00000014301 Pam16 2010110I09Rik|AV006767|CGI-136|Magmas|Tim16|Timm16 presequence translocase-asssociated motor 16 homolog (S. cerevisiae) protein-coding common_peak1_107_775_0.07551934702518_9.63767251569972_0.553104082716572 chr15 99771555 99772843 + 0.553104082716572 NA exon (NM_028015, exon 1 of 10) exon (NM_028015, exon 1 of 10) 316 NM_028015 71949 Mm.390821 NM_028015 ENSMUSG00000023021 Cers5 2310081H14Rik|AU045339|AW544927|Lass5|Trh4 ceramide synthase 5 protein-coding common_peak1_87_675_-0.0878570712155202_9.35695090067442_0.552997718776262 chr19 34549959 34551150 + 0.552997718776262 NA promoter-TSS (NM_008332) promoter-TSS (NM_008332) -140 NM_008332 15958 Mm.2036 NM_008332 ENSMUSG00000045932 Ifit2 AV302338|Ifi54|P54 interferon-induced protein with tetratricopeptide repeats 2 protein-coding common_peak1_56_403_-0.113712763201622_8.60135510115098_0.552938794066581-2 chr8 69088607 69089430 + 0.552938794066581 NA 5' UTR (NM_153054, exon 1 of 17) 5' UTR (NM_153054, exon 1 of 17) 204 NM_153054 110877 Mm.19301 NM_153054 ENSMUSG00000036330 Slc18a1 4832416I10Rik|Vat1|Vmat1 solute carrier family 18 (vesicular monoamine), member 1 protein-coding common_peak1_56_403_-0.113712763201622_8.60135510115098_0.552938794066581 chr19 4200938 4201669 + 0.552938794066581 NA intron (NM_011237, intron 2 of 10) intron (NM_011237, intron 2 of 10) 300 NM_011237 19367 Mm.277629 NM_011237 ENSMUSG00000024824 Rad9a Rad9 RAD9 checkpoint clamp component A protein-coding common_peak2_41_282_-0.140571287847028_8.07437259890837_0.55291446510014 chr13 73740148 73741782 + 0.55291446510014 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -22732 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak1_36_198_0.143159030667761_7.70820413587753_0.55257985391183 chr2 84678324 84678919 + 0.55257985391183 NA promoter-TSS (NM_001290751) promoter-TSS (NM_001290751) 207 NM_025868 66958 Mm.371621 NM_025868 ENSMUSG00000050043 Tmx2 2310042M24Rik|AA589631|Txndc14 thioredoxin-related transmembrane protein 2 protein-coding common_peak1_26_131_0.177813447481141_7.13330084309902_0.552473730091231-3 chr5 8541968 8542561 + 0.552473730091231 NA intron (NM_198620, intron 6 of 9) intron (NM_198620, intron 6 of 9) 80688 NM_198620 242819 Mm.332192 NM_198620 ENSMUSG00000040570 Rundc3b Gm440 RUN domain containing 3B protein-coding common_peak1_26_131_0.177813447481141_7.13330084309902_0.552473730091231 chr11 67589092 67589617 + 0.552473730091231 NA intron (NM_001109657, intron 1 of 13) intron (NM_001109657, intron 1 of 13) 2854 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_26_131_0.177813447481141_7.13330084309902_0.552473730091231-2 chr16 50732919 50733295 + 0.552473730091231 NA promoter-TSS (NR_028300) promoter-TSS (NR_028300) -334 NR_028300 68190 Mm.139089 NR_028300 Dubr 5330426P16Rik|Dum Dppa2 upstream binding RNA ncRNA unique_peak2_26_131_0.177813447481141_7.13330084309902_0.552473730091231 chr4 134763554 134764687 + 0.552473730091231 NA intron (NM_145554, intron 1 of 8) intron (NM_145554, intron 1 of 8) 3884 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak2_44_305_-0.13120920512802_8.19178324012864_0.552468463891209 chr5 100643067 100644660 + 0.552468463891209 NA Intergenic Intergenic 30393 NM_027978 71883 Mm.260661 NM_027978 ENSMUSG00000029319 Coq2 2310002F18Rik|PHB:PPT coenzyme Q2 4-hydroxybenzoate polyprenyltransferase protein-coding common_peak1_44_305_-0.13120920512802_8.19178324012864_0.552468463891209 chr9 110640946 110641857 + 0.552468463891209 NA intron (NM_183276, intron 10 of 53) intron (NM_183276, intron 10 of 53) -5286 NR_106186 102466885 NR_106186 ENSMUSG00000099275 Mir8107 Gm27455|mmu-mir-8107 microRNA 8107 ncRNA common_peak2_259_2328_0.0446442184947422_11.2078170334582_0.552435239545678 chr15 76310364 76313827 + 0.552435239545678 NA Intergenic ID_B1|SINE|B4 -4850 NM_153122 75475 Mm.322738 NM_153122 ENSMUSG00000022562 Oplah 1700010G02Rik 5-oxoprolinase (ATP-hydrolysing) protein-coding common_peak2_84_573_0.086734921176804_9.20827438726409_0.552359715194761 chr2 166456368 166458712 + 0.552359715194761 NA intron (NR_015558, intron 2 of 2) MTEa|LTR|ERVL-MaLR 10089 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak1_28_183_-0.174898641544445_7.43611263528479_0.552207251614523 chr2 155357051 155357431 + 0.552207251614523 NA TTS (NR_030475) TTS (NR_030475) 183 NM_001004721 228812 Mm.5434 NM_001004721 ENSMUSG00000038383 Pigu 5430426F17Rik|BC028278|Cdc91l1 phosphatidylinositol glycan anchor biosynthesis, class U protein-coding common_peak2_28_183_-0.174898641544445_7.43611263528479_0.552207251614523 chr3 142493618 142494400 + 0.552207251614523 NA Intergenic Intergenic -2925 NM_153564 229898 Mm.459245 NM_153564 ENSMUSG00000105504 Gbp5 5330409J06Rik|Gbp5a guanylate binding protein 5 protein-coding common_peak1_91_712_-0.0860728399776658_9.43472184645506_0.552102229123656 chr2 127309584 127311273 + 0.552102229123656 NA Intergenic ORR1C2|LTR|ERVL-MaLR -25731 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak1_47_329_-0.125934434967364_8.30335499676213_0.55197877518861 chr3 69177024 69177872 + 0.55197877518861 NA Intergenic Intergenic -44971 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding common_peak1_422_4465_-0.033367416089888_12.1080838277775_0.551926736031487 chr18 39488567 39492078 + 0.551926736031487 NA Intergenic CpG -3077 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak2_66_488_-0.10314695480251_8.88211717755098_0.551848271806416 chr7 68716051 68718452 + 0.551848271806416 NA Intergenic Intergenic 31987 NM_001042592 66412 Mm.251199 NM_025549 ENSMUSG00000042659 Arrdc4 2410003C09Rik|AV216361 arrestin domain containing 4 protein-coding common_peak1_19_119_-0.215756367977742_6.79901241161965_0.551651255369988-2 chr11 108243123 108243647 + 0.551651255369988 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 100503 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_19_119_-0.215756367977742_6.79901241161965_0.551651255369988 chr11 69670312 69670893 + 0.551651255369988 NA intron (NM_144958, intron 3 of 10) intron (NM_144958, intron 3 of 10) 1821 NM_144958 13681 Mm.26680 NM_144958 ENSMUSG00000059796 Eif4a1 BM-010|Ddx2a|Eif4 eukaryotic translation initiation factor 4A1 protein-coding common_peak2_382_3958_-0.0353100551016787_11.9332653244793_0.551612024078596 chr11 118246345 118250243 + 0.551612024078596 NA intron (NM_011180, intron 1 of 12) CpG 298 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_95_749_-0.0837466949184353_9.50887343792403_0.551594650466469 chr16 17086646 17087726 + 0.551594650466469 NA TTS (NM_023249) TTS (NM_023249) 17047 NM_001291047 106369 Mm.237941 NM_023249 ENSMUSG00000022773 Ypel1 0610009L05Rik|1700016N17Rik|1700019O22Rik|4921520K19Rik|4930511F14Rik|AV118478|DGL-1|Dgl1|Ppil2|mdgl-1 yippee-like 1 (Drosophila) protein-coding common_peak2_50_354_-0.124004437264588_8.40967299575975_0.551458786207884 chr5 105292895 105294388 + 0.551458786207884 NA promoter-TSS (NM_194336) promoter-TSS (NM_194336) 58 NM_194336 100702 Mm.491210 NM_194336 ENSMUSG00000079362 Gbp6 AI595338|Mpa2l guanylate binding protein 6 protein-coding common_peak1_70_456_0.097109190788947_8.88460495045254_0.551317223305207 chr7 101356528 101357490 + 0.551317223305207 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) 8940 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_77_514_0.0911271387236372_9.0539921914324_0.551315464883665 chr10 59932611 59933808 + 0.551315464883665 NA Intergenic Intergenic 18561 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak2_431_4377_0.032600572404073_12.112356525383_0.551190022465983 chr17 35865400 35871745 + 0.551190022465983 NA exon (NM_175242, exon 1 of 3) exon (NM_175242, exon 1 of 3) 1957 NM_175242 76448 Mm.359982 NM_175242 ENSMUSG00000034595 Ppp1r18 2310014H01Rik|AA407849|AI450394 protein phosphatase 1, regulatory subunit 18 protein-coding common_peak1_180_1482_0.054904433021731_10.5617550989655_0.551092033805196 chr14 75834013 75835761 + 0.551092033805196 NA Intergenic Intergenic 10077 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA common_peak2_160_1390_-0.0599097911832605_10.4119518089506_0.551037970171564 chr9 56994337 56996501 + 0.551037970171564 NA 5' UTR (NM_019651, exon 1 of 13) 5' UTR (NM_019651, exon 1 of 13) 451 NM_019651 56294 Mm.325643 NM_019651 ENSMUSG00000032290 Ptpn9 MEG2 protein tyrosine phosphatase, non-receptor type 9 protein-coding common_peak1_60_376_0.106098737778309_8.61147008215782_0.551005037237214 chr14 19968475 19969204 + 0.551005037237214 NA intron (NM_001285908, intron 1 of 3) B1F|SINE|Alu 7854 NM_001285911 14702 Mm.41737 NM_010315 ENSMUSG00000043004 Gng2 - guanine nucleotide binding protein (G protein), gamma 2 protein-coding unique_peak2_13_80_-0.279897564053054_6.1999012208581_0.551001890598192-2 chr7 90069795 90070537 + 0.551001890598192 NA Intergenic Intergenic 41007 NR_110364 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15 RIKEN cDNA E230029C05 gene ncRNA common_peak1_13_80_-0.279897564053054_6.1999012208581_0.551001890598192-2 chr7 38094839 38095233 + 0.551001890598192 NA Intergenic Intergenic 12454 NM_007633 12447 Mm.16110 NM_007633 ENSMUSG00000002068 Ccne1 AW538188|CycE1 cyclin E1 protein-coding unique_peak2_13_80_-0.279897564053054_6.1999012208581_0.551001890598192 chr19 46518347 46518974 + 0.551001890598192 NA Intergenic Intergenic 17012 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak1_13_80_-0.279897564053054_6.1999012208581_0.551001890598192 chr6 33618228 33618542 + 0.551001890598192 NA intron (NM_009148, intron 10 of 17) intron (NM_009148, intron 10 of 17) 369235 NM_009148 20336 Mm.265512 NM_009148 ENSMUSG00000029763 Exoc4 C78892|Sec8|Sec8l1 exocyst complex component 4 protein-coding common_peak2_92_642_0.0821417935596429_9.36974582410777_0.550711631857087 chr14 52013691 52015946 + 0.550711631857087 NA promoter-TSS (NM_001253695) promoter-TSS (NM_001253695) -260 NM_001253695 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik zinc finger protein 219 protein-coding common_peak1_92_642_0.0821417935596429_9.36974582410777_0.550711631857087 chr3 95433834 95435200 + 0.550711631857087 NA 5' UTR (NM_009709, exon 1 of 21) 5' UTR (NM_009709, exon 1 of 21) 127 NM_001037737 11863 Mm.250265 NM_009709 ENSMUSG00000015522 Arnt D3Ertd557e|Drnt|ESTM42|Hif1b|W08714|bHLHe2|mKIAA4051 aryl hydrocarbon receptor nuclear translocator protein-coding common_peak2_108_784_0.0751933917506467_9.65414553965431_0.55028693953343 chr10 68197931 68200435 + 0.55028693953343 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 79543 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_232_2170_-0.0480324497412958_11.0601277857445_0.550226516550886 chr19 53193314 53196231 + 0.550226516550886 NA intron (NM_013758, intron 1 of 15) intron (NM_013758, intron 1 of 15) 50775 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak2_333_3180_0.0380942603348018_11.6543117867069_0.550187402171594 chrX 36979211 36986207 + 0.550187402171594 NA intron (NM_001177323, intron 1 of 9) intron (NM_001177323, intron 1 of 9) 6986 NM_001177324 56526 Mm.260036 NM_019942 ENSMUSG00000050379 Sept6 2810035H17Rik|C920001C06Rik|Sep6|mKIAA0128 septin 6 protein-coding common_peak1_81_547_0.0900234932912554_9.14304382960615_0.550118888590253 chr7 135537570 135538565 + 0.550118888590253 NA exon (NM_001316678, exon 1 of 20) exon (NM_001316678, exon 1 of 20) 243 NM_001316678 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_104_748_0.076758322218069_9.58720106956778_0.550116703128836 chr7 73583657 73584850 + 0.550116703128836 NA Intergenic Intergenic -25858 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_190_1708_-0.0545651756893459_10.7116540938315_0.549915368062267 chr11 87447276 87449269 + 0.549915368062267 NA intron (NM_031386, intron 2 of 30) CpG 20681 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_249_2362_-0.0456708237727863_11.1835685020875_0.549842114250975 chr5 3802138 3804348 + 0.549842114250975 NA promoter-TSS (NM_030675) promoter-TSS (NM_030675) 62 NR_033173 79264 Mm.32368 NM_030675 ENSMUSG00000000600 Krit1 2010007K12Rik|A630036P20Rik|AA432855|AI450393|AI643869|BB155247|BB235701|Ccm1 KRIT1, ankyrin repeat containing protein-coding common_peak2_238_2237_-0.0468898068838151_11.1045494175345_0.549652908669642 chr12 17690413 17693789 + 0.549652908669642 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 1287 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak1_88_684_-0.0869418090837009_9.37648927330604_0.54958407651119 chr4 135493406 135495019 + 0.54958407651119 NA intron (NM_028995, intron 1 of 11) intron (NM_028995, intron 1 of 11) 292 NM_028995 74552 Mm.26548 NM_028995 ENSMUSG00000028803 Nipal3 9130020G22Rik|AI480660|Npal3 NIPA-like domain containing 3 protein-coding common_peak1_42_240_0.132837834023989_7.97930825324196_0.549292146186501 chr11 79644422 79645006 + 0.549292146186501 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) -21551 NR_003283 790912 Mm.447313 NR_003283 ENSMUSG00000087434 Rab11fip4os1 Gm11202|OTTMUSG00000000185 RAB11 family interacting protein 4 (class II), opposite strand 1 ncRNA unique_peak2_42_240_0.132837834023989_7.97930825324196_0.549292146186501 chr4 59233704 59235262 + 0.549292146186501 NA Intergenic Intergenic -25568 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_17_106_-0.236781624528479_6.62307617413691_0.54928100691955 chr11 89100755 89101386 + 0.54928100691955 NA Intergenic Intergenic 27229 NM_001033266 217071 Mm.342127 NM_001033266 ENSMUSG00000072553 Gm525 - predicted gene 525 protein-coding common_peak1_17_106_-0.236781624528479_6.62307617413691_0.54928100691955 chr10 117873784 117874265 + 0.54928100691955 NA Intergenic Intergenic -28050 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding unique_peak2_17_106_-0.236781624528479_6.62307617413691_0.54928100691955 chr12 110454308 110455054 + 0.54928100691955 NA intron (NM_001135001, intron 2 of 13) MER3|DNA|hAT-Charlie 7502 NM_001135001 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_54_329_0.1149688041401_8.42380661631586_0.54926722391791 chr5 115065456 115066397 + 0.54926722391791 NA intron (NM_029012, intron 2 of 10) intron (NM_029012, intron 2 of 10) 42036 NM_001271591 100502825 Mm.361657 NM_001271590 Rpl37rt Gm13826|OTTMUSG00000014624 ribosomal protein L37, retrotransposed protein-coding common_peak2_67_432_0.0985376686201587_8.8074920490368_0.549251054833823 chr10 19093625 19095184 + 0.549251054833823 NA Intergenic Intergenic -47345 NR_038021 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak2_36_243_-0.150953686351476_7.85526049438715_0.549233412050318 chr2 161511021 161511923 + 0.549233412050318 NA Intergenic Intergenic -402386 NR_126509 71389 Mm.122738 NM_173368 ENSMUSG00000057133 Chd6 5430439G14Rik|6330406J24Rik|CHD-6 chromodomain helicase DNA binding protein 6 protein-coding common_peak1_134_1026_0.0660926873997205_10.0372668100181_0.549206007246499 chr6 25808661 25810003 + 0.549206007246499 NA promoter-TSS (NM_133931) promoter-TSS (NM_133931) -106 NM_133931 101185 Mm.274589 NM_133931 ENSMUSG00000029676 Pot1a 1500031H18Rik|AI851169|Pot1 protection of telomeres 1A protein-coding common_peak2_661_7691_-0.0251384914914716_12.8965738015942_0.549136275868071 chr10 127161618 127168917 + 0.549136275868071 NA promoter-TSS (NM_001244618) promoter-TSS (NM_001244618) 111 NM_001244617 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak2_74_489_0.0935117692870957_8.98339382364612_0.549122342821854 chr6 59411781 59413631 + 0.549122342821854 NA intron (NM_183183, intron 1 of 1) intron (NM_183183, intron 1 of 1) 13584 NM_183183 243385 Mm.138080 NM_183183 ENSMUSG00000045441 Gprin3 C030038J10Rik|C730021L23 GPRIN family member 3 protein-coding common_peak1_261_2500_-0.0445897691477413_11.2659944576071_0.549050390573213 chr5 21409653 21412372 + 0.549050390573213 NA intron (NM_029195, intron 1 of 18) intron (NM_029195, intron 1 of 18) 13665 NM_029195 75172 Mm.426695 NM_029195 ENSMUSG00000064280 Ccdc146 4930528G09Rik|mKIAA1505 coiled-coil domain containing 146 protein-coding common_peak1_157_1250_0.0598453281338518_10.3187887382327_0.548973825227753 chr6 115675827 115677294 + 0.548973825227753 NA promoter-TSS (NM_029780) promoter-TSS (NM_029780) 75 NM_029780 110157 Mm.184163 NM_029780 ENSMUSG00000000441 Raf1 6430402F14Rik|AA990557|BB129353|Craf1|D830050J10Rik|Raf-1|c-Raf|v-Raf v-raf-leukemia viral oncogene 1 protein-coding unique_peak2_15_93_-0.25833558855247_6.4254210574014_0.548750809231233-2 chr5 134436865 134437482 + 0.548750809231233 NA intron (NM_001081469, intron 1 of 27) RLTR9E|LTR|ERVK 19089 NM_001081465 57080 Mm.332735 NM_020331 ENSMUSG00000023079 Gtf2ird1 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320 general transcription factor II I repeat domain-containing 1 protein-coding unique_peak2_15_93_-0.25833558855247_6.4254210574014_0.548750809231233 chr2 25111562 25112269 + 0.548750809231233 NA Intergenic Intergenic -16710 NM_172204 241275 Mm.218774 NM_172204 ENSMUSG00000036805 Noxa1 NY-CO-31|SDCCAG31 NADPH oxidase activator 1 protein-coding common_peak1_15_93_-0.25833558855247_6.4254210574014_0.548750809231233 chr2 166612951 166613407 + 0.548750809231233 NA exon (NM_177782, exon 8 of 40) exon (NM_177782, exon 8 of 40) -59539 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_15_93_-0.25833558855247_6.4254210574014_0.548750809231233-2 chr4 46571943 46572300 + 0.548750809231233 NA intron (NM_001164804, intron 1 of 11) Lx9|LINE|L1 -5681 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding unique_peak2_26_168_-0.17867186944259_7.31154350156089_0.548465821492636 chr1 89078809 89079907 + 0.548465821492636 NA intron (NM_133816, intron 1 of 5) intron (NM_133816, intron 1 of 5) 8896 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak2_26_168_-0.17867186944259_7.31154350156089_0.548465821492636 chr3 121171117 121171835 + 0.548465821492636 NA intron (NM_025637, intron 1 of 6) intron (NM_025637, intron 1 of 6) 219 NM_028456 66568 Mm.263163 NM_025637 ENSMUSG00000028133 Rwdd3 2510027J23Rik|3110037C01Rik|AI035684|AI662458|Rsume|X2CR1 RWD domain containing 3 protein-coding common_peak1_26_168_-0.17867186944259_7.31154350156089_0.548465821492636 chr15 78503033 78503744 + 0.548465821492636 NA Intergenic Intergenic -8322 NM_008368 16185 Mm.35287 NM_008368 ENSMUSG00000068227 Il2rb CD122|IL-15Rbeta|IL15Rbeta|Il-2/15Rbeta|Il-2Rbeta|p70 interleukin 2 receptor, beta chain protein-coding common_peak1_26_168_-0.17867186944259_7.31154350156089_0.548465821492636-3 chr16 92301329 92301852 + 0.548465821492636 NA intron (NM_138743, intron 1 of 3) intron (NM_138743, intron 1 of 3) 287 NM_138743 68936 Mm.21698 NM_138743 ENSMUSG00000051989 Smim11 1190017O12Rik|C21orf51|Fam165b|Smim11a small integral membrane protein 11 protein-coding common_peak1_26_168_-0.17867186944259_7.31154350156089_0.548465821492636-4 chr6 31130786 31131186 + 0.548465821492636 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -67893 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_26_168_-0.17867186944259_7.31154350156089_0.548465821492636-2 chr16 11322712 11323332 + 0.548465821492636 NA intron (NM_028964, intron 1 of 20) intron (NM_028964, intron 1 of 20) 118 NM_028964 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak1_162_1300_0.0584391972035743_10.3746248453196_0.548456509116464 chr19 4154088 4156559 + 0.548456509116464 NA intron (NM_016933, intron 1 of 1) intron (NM_016933, intron 1 of 1) 677 NM_016933 19265 Mm.271937 NM_016933 ENSMUSG00000045826 Ptprcap AI605264|CD-45-AP|LPAP|LSM-1 protein tyrosine phosphatase, receptor type, C polypeptide-associated protein protein-coding common_peak1_104_833_-0.0783233427678436_9.66474190206074_0.548443571634 chr19 57081946 57083604 + 0.548443571634 NA intron (NM_001290813, intron 7 of 20) intron (NM_001290813, intron 7 of 20) 36249 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_186_1664_-0.0543887878566007_10.6741120680303_0.54836756495933 chr4 132975536 132978142 + 0.54836756495933 NA intron (NM_010208, intron 1 of 12) intron (NM_010208, intron 1 of 12) 2744 NM_010208 14191 Mm.271665 NM_010208 ENSMUSG00000028874 Fgr - FGR proto-oncogene, Src family tyrosine kinase protein-coding common_peak2_45_262_0.126154125987563_8.10199605228608_0.548323200518396 chr15 81360146 81361453 + 0.548323200518396 NA promoter-TSS (NM_011399) promoter-TSS (NM_011399) -34 NM_011399 20524 Mm.222536 NM_011399 ENSMUSG00000022404 Slc25a17 34kDa|47kDa|PMP34|Pmp47 solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 protein-coding common_peak1_125_1036_-0.0699787076750873_9.98321082497568_0.548240544535314 chr11 53804924 53806991 + 0.548240544535314 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 35484 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_48_284_0.12205812785858_8.21584717298139_0.548232763223126 chr14 70545068 70545913 + 0.548232763223126 NA 5' UTR (NM_180588, exon 1 of 8) 5' UTR (NM_180588, exon 1 of 8) 239 NM_180588 72549 Mm.46742 NM_180588 ENSMUSG00000033589 Reep4 2700029E10Rik receptor accessory protein 4 protein-coding common_peak2_48_284_0.12205812785858_8.21584717298139_0.548232763223126-2 chr16 32740992 32743004 + 0.548232763223126 NA intron (NM_080457, intron 1 of 26) intron (NM_080457, intron 1 of 26) 6112 NM_080457 140474 Mm.214599 NM_080457 ENSMUSG00000079620 Muc4 4933405I11Rik|Asgp mucin 4 protein-coding common_peak1_48_284_0.12205812785858_8.21584717298139_0.548232763223126 chrX 8991583 8992629 + 0.548232763223126 NA Intergenic Intergenic -5434 NM_001099326 100042782 Mm.388703 NM_001099326 ENSMUSG00000078206 Fthl17d Fthl17L3|Gm14458|OTTMUSG00000016694 ferritin, heavy polypeptide-like 17, member D protein-coding common_peak1_51_307_0.115247015132386_8.32441004826109_0.548061481272783 chr11 5443290 5444284 + 0.548061481272783 NA intron (NM_001080924, intron 1 of 8) intron (NM_001080924, intron 1 of 8) 1060 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding common_peak1_229_1999_0.047394417496097_10.9894814934101_0.547989084118516 chr11 29172071 29174034 + 0.547989084118516 NA 5' UTR (NM_134034, exon 1 of 16) 5' UTR (NM_134034, exon 1 of 16) 145 NM_134034 104570 Mm.276386 NM_134034 ENSMUSG00000020463 Smek2 AW011752|AW557776|Ppp4r3b|mKIAA1387 SMEK homolog 2, suppressor of mek1 (Dictyostelium) protein-coding common_peak1_57_411_-0.111224901484293_8.63088807644107_0.547847266133579 chr2 126597000 126597659 + 0.547847266133579 NA intron (NM_008230, intron 10 of 11) intron (NM_008230, intron 10 of 11) 21349 NM_008230 15186 Mm.18603 NM_008230 ENSMUSG00000027360 Hdc AW108189|Hdc-a|Hdc-c|Hdc-e|Hdc-s histidine decarboxylase protein-coding common_peak1_177_1451_0.0558049419547935_10.5317282089731_0.547830695110398 chr17 25246354 25248618 + 0.547830695110398 NA exon (NM_001163270, exon 16 of 34) exon (NM_001163270, exon 16 of 34) -1848 NR_105931 102465583 NR_105931 ENSMUSG00000093202 Mir3547 Gm22410|mmu-mir-3547 microRNA 3547 ncRNA common_peak2_187_1554_0.0536568447807664_10.6295272874083_0.547802978191901 chr9 4308698 4310929 + 0.547802978191901 NA promoter-TSS (NM_026276) promoter-TSS (NM_026276) -3 NM_026962 69149 Mm.25946 NM_026962 ENSMUSG00000025893 Kbtbd3 2200003A07Rik|Bklhd3 kelch repeat and BTB (POZ) domain containing 3 protein-coding common_peak2_323_3063_0.0383661234406336_11.6003836436453_0.547767138860995 chr12 84191986 84195358 + 0.547767138860995 NA 5' UTR (NM_001163502, exon 1 of 13) 5' UTR (NM_001163502, exon 1 of 13) 343 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_78_522_0.0914319548663745_9.07638311368013_0.547602783186849 chr7 141302412 141304049 + 0.547602783186849 NA intron (NM_016874, intron 10 of 11) intron (NM_016874, intron 10 of 11) 11224 NM_007878 13491 Mm.41075 NM_007878 ENSMUSG00000025496 Drd4 AW125663|D4R|Drd-4 dopamine receptor D4 protein-coding common_peak2_64_408_0.100957487391147_8.72643577663732_0.547458699909265-2 chr17 34046873 34048649 + 0.547458699909265 NA intron (NM_009926, intron 6 of 63) intron (NM_009926, intron 6 of 63) 8324 NM_009926 12815 Mm.20230 NM_009926 ENSMUSG00000024330 Col11a2 - collagen, type XI, alpha 2 protein-coding common_peak1_64_408_0.100957487391147_8.72643577663732_0.547458699909265 chr16 42907054 42908079 + 0.547458699909265 NA promoter-TSS (NM_001285805) promoter-TSS (NM_001285805) -79 NM_001285805 56490 Mm.136238 NM_019778 ENSMUSG00000022708 Zbtb20 1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|ODA-8S|Oda8|Zfp288 zinc finger and BTB domain containing 20 protein-coding common_peak2_64_408_0.100957487391147_8.72643577663732_0.547458699909265 chr17 23550109 23551649 + 0.547458699909265 NA promoter-TSS (NR_126485) promoter-TSS (NR_126485) 80 NR_126484 320020 Mm.445111 NR_126484 6330415G19Rik - RIKEN cDNA 6330415G19 gene ncRNA common_peak2_292_2861_-0.0412142935338178_11.4622008099598_0.5473591191689 chr7 45119996 45125520 + 0.5473591191689 NA TTS (NR_029560) TTS (NR_029560) 353 NR_000004 27212 NR_000004 ENSMUSG00000064767 Snord35b Rnu35b|U35 small nucleolar RNA, C/D box 35B snoRNA common_peak2_39_266_-0.142949392870422_7.98922123525234_0.547335863863491 chr10 40399809 40401190 + 0.547335863863491 NA intron (NM_001291817, intron 2 of 11) intron (NM_001291817, intron 2 of 11) 51191 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak2_39_266_-0.142949392870422_7.98922123525234_0.547335863863491-3 chrX 107815342 107816396 + 0.547335863863491 NA promoter-TSS (NM_001163104) promoter-TSS (NM_001163104) 465 NM_025921 67028 Mm.37274 NM_025921 ENSMUSG00000031242 2610002M06Rik 8430408J07Rik|AI876413|Chmp1b2 RIKEN cDNA 2610002M06 gene protein-coding common_peak1_39_266_-0.142949392870422_7.98922123525234_0.547335863863491 chr5 62790788 62791424 + 0.547335863863491 NA Intergenic MLT2E|LTR|ERVL -22717 NM_001170705 100322896 Mm.479821 NM_001170705 ENSMUSG00000090326 Dthd1 Gm17384 death domain containing 1 protein-coding common_peak2_39_266_-0.142949392870422_7.98922123525234_0.547335863863491-2 chr5 130256957 130257713 + 0.547335863863491 NA intron (NM_001015876, intron 1 of 15) B1F|SINE|Alu 298 NM_001015876 100929 Mm.271296 NM_178897 ENSMUSG00000056310 Tyw1 AW125391|Rsafd1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) protein-coding common_peak1_31_205_-0.163634952871694_7.60468305074737_0.547324343436867-2 chr2 102867640 102868314 + 0.547324343436867 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 33688 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak2_34_184_0.150064254007222_7.60641358751992_0.547324343436867 chr4 32387300 32388506 + 0.547324343436867 NA Intergenic Intergenic -29532 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak2_34_184_0.150064254007222_7.60641358751992_0.547324343436867 chr11 62646000 62647280 + 0.547324343436867 NA intron (NM_198861, intron 1 of 3) intron (NM_198861, intron 1 of 3) 1883 NM_198861 192976 Mm.339972 NM_198861 ENSMUSG00000046417 Lrrc75a Fam211a leucine rich repeat containing 75A protein-coding common_peak1_31_205_-0.163634952871694_7.60468305074737_0.547324343436867 chr2 27009230 27009790 + 0.547324343436867 NA promoter-TSS (NM_029862) promoter-TSS (NM_029862) -416 NM_001243240 381356 Mm.150270 NM_029862 ENSMUSG00000015488 Cacfd1 5930434B04Rik|mFwe calcium channel flower domain containing 1 protein-coding common_peak1_31_205_-0.163634952871694_7.60468305074737_0.547324343436867-3 chr8 70131005 70131635 + 0.547324343436867 NA promoter-TSS (NM_001025587) promoter-TSS (NM_001025587) -7 NR_104434 75692 Mm.161167 NM_001025586 ENSMUSG00000071078 Nr2c2ap 2310073E15Rik nuclear receptor 2C2-associated protein protein-coding unique_peak2_24_119_0.179124596527865_6.99645289387245_0.54731282338142 chr9 32745345 32746400 + 0.54731282338142 NA intron (NM_011808, intron 6 of 7) intron (NM_011808, intron 6 of 7) 49830 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_24_119_0.179124596527865_6.99645289387245_0.54731282338142 chr7 142369545 142369983 + 0.54731282338142 NA intron (NM_177265, intron 2 of 3) intron (NM_177265, intron 2 of 3) 2495 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_85_656_-0.0874100788820247_9.31604452088132_0.54718943574884 chr10 39484198 39485710 + 0.54718943574884 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 115155 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_126_951_0.0673929308661023_9.92851422874099_0.547168916796586 chr2 27009174 27011031 + 0.547168916796586 NA TTS (NM_001290463) TTS (NM_001290463) 176 NM_001243239 381356 Mm.150270 NM_029862 ENSMUSG00000015488 Cacfd1 5930434B04Rik|mFwe calcium channel flower domain containing 1 protein-coding common_peak2_71_464_0.0968230782499848_8.90949844512039_0.547148457208688 chr13 114387285 114388452 + 0.547148457208688 NA intron (NM_010887, intron 1 of 4) CpG 226 NM_010887 17993 Mm.253142 NM_010887 ENSMUSG00000021764 Ndufs4 6720411N02Rik|C1-18k NADH dehydrogenase (ubiquinone) Fe-S protein 4 protein-coding common_peak2_4_13_0.43055468320046_4.02263226365783_0.546772548767014 chr3 125228314 125228539 + 0.546772548767014 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat -175665 NM_022565 64580 Mm.444289 NM_022565 ENSMUSG00000027971 Ndst4 4930439H17Rik N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4 protein-coding common_peak1_139_1175_-0.0650020079401177_10.1671713408663_0.546722169135862 chr5 96917109 96918374 + 0.546722169135862 NA Intergenic Intergenic -3531 NR_131152 666266 Mm.32442 NR_131152 ENSMUSG00000106357 Gm8013 EG666266 predicted gene 8013 ncRNA common_peak2_42_289_-0.134181919760984_8.11281813013444_0.54653323662511 chr5 25705052 25706311 + 0.54653323662511 NA exon (NM_020570, exon 1 of 3) exon (NM_020570, exon 1 of 3) 116 NM_020570 57434 Mm.143767 NM_020570 ENSMUSG00000028933 Xrcc2 4921524O04Rik|8030409M04Rik|RAD51|RecA X-ray repair complementing defective repair in Chinese hamster cells 2 protein-coding common_peak1_42_289_-0.134181919760984_8.11281813013444_0.54653323662511 chr7 28350173 28350620 + 0.54653323662511 NA promoter-TSS (NM_013647) promoter-TSS (NM_013647) -293 NM_013647 20055 Mm.702 NM_013647 ENSMUSG00000037563 Rps16 AA420385|AI317031 ribosomal protein S16 protein-coding common_peak2_113_919_-0.0743790202078447_9.80830054084045_0.546300122492581 chr7 127231798 127233969 + 0.546300122492581 NA promoter-TSS (NM_146201) promoter-TSS (NM_146201) 247 NR_030674 100043580 Mm.482209 NR_030674 ENSMUSG00000000486 Gm4532 - predicted gene 4532 ncRNA common_peak1_82_556_0.0879723518283164_9.16551969325419_0.546212022382932 chr4 124741124 124742600 + 0.546212022382932 NA promoter-TSS (NM_008385) promoter-TSS (NM_008385) 12 NR_126474 16330 Mm.296202 NM_008385 ENSMUSG00000028894 Inpp5b 5PTase|AW260155|INPP5P inositol polyphosphate-5-phosphatase B protein-coding common_peak1_61_384_0.104579880338399_8.64100457575146_0.545990618822704 chr10 34127214 34128211 + 0.545990618822704 NA exon (NM_175449, exon 1 of 2) exon (NM_175449, exon 1 of 2) 260 NM_175449 215900 Mm.34479 NM_175449 ENSMUSG00000046031 Fam26f A630077B13Rik family with sequence similarity 26, member F protein-coding common_peak1_51_362_-0.121792182168463_8.44292964691152_0.545698656912164-2 chr5 113561987 113562853 + 0.545698656912164 NA intron (NM_177292, intron 3 of 7) intron (NM_177292, intron 3 of 7) 12000 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak2_51_362_-0.121792182168463_8.44292964691152_0.545698656912164 chr7 97331665 97333071 + 0.545698656912164 NA promoter-TSS (NM_001039039) promoter-TSS (NM_001039039) 45 NM_001039039 622320 Mm.334029 NM_001039039 ENSMUSG00000044952 Kctd21 EG622320 potassium channel tetramerisation domain containing 21 protein-coding common_peak1_51_362_-0.121792182168463_8.44292964691152_0.545698656912164 chr11 84829129 84829889 + 0.545698656912164 NA promoter-TSS (NM_177564) promoter-TSS (NM_177564) 331 NR_046281 74995 Mm.84413 NR_046281 ENSMUSG00000086799 4930502E09Rik - RIKEN cDNA 4930502E09 gene ncRNA common_peak2_97_767_-0.0814739526241155_9.5442255244091_0.545551365661122 chr19 21895969 21898649 + 0.545551365661122 NA Intergenic Intergenic 118969 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding unique_peak2_29_151_0.160728919154118_7.32829197302064_0.545378877413178 chr5 77245416 77246483 + 0.545378877413178 NA Intergenic Intergenic -19545 NM_011263 19712 Mm.28840 NM_011263 ENSMUSG00000029249 Rest 2610008J04Rik|AA407358|NRSF|REST4 RE1-silencing transcription factor protein-coding common_peak2_75_497_0.0935868937015218_9.00679537891884_0.545259563246654 chr7 130865610 130867054 + 0.545259563246654 NA intron (NM_133942, intron 1 of 9) CpG 422 NM_133942 101476 Mm.323554 NM_133942 ENSMUSG00000040268 Plekha1 AA960558|C920009D07Rik|TAPP1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 protein-coding common_peak2_358_3479_0.0362215085114244_11.7829823449918_0.545115283528289 chr7 45236843 45240456 + 0.545115283528289 NA intron (NM_001290804, intron 1 of 7) intron (NM_001290804, intron 1 of 7) 190 NM_007645 12493 Mm.3689 NM_007645 ENSMUSG00000030798 Cd37 Tspan26 CD37 antigen protein-coding common_peak2_573_6466_-0.0272892095306254_12.6452362902826_0.545095402313061 chr10 118094682 118104592 + 0.545095402313061 NA Intergenic Intergenic -42150 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak1_127_960_0.0676975759104863_9.94224140872899_0.544916070859218 chr4 84021433 84023336 + 0.544916070859218 NA Intergenic Intergenic 22495 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak2_110_803_0.0728664761857676_9.68748492927181_0.544541677551976 chr10 62601283 62603119 + 0.544541677551976 NA promoter-TSS (NM_019553) promoter-TSS (NM_019553) 97 NM_019553 56200 Mm.413275 NM_019553 ENSMUSG00000020075 Ddx21 AI255159|AL022742|D10Ertd645e|D10Wsu42e DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 protein-coding common_peak2_34_227_-0.151444299641208_7.75716786434414_0.544420597730349 chr17 23676736 23677559 + 0.544420597730349 NA intron (NM_013749, intron 1 of 3) CpG 302 NM_001161746 27279 Mm.28518 NM_013749 ENSMUSG00000023905 Tnfrsf12a AI255180|C87282|Fn14|HPIP|TWEAK-R|TweakR tumor necrosis factor receptor superfamily, member 12a protein-coding common_peak1_34_227_-0.151444299641208_7.75716786434414_0.544420597730349 chr16 24504481 24505201 + 0.544420597730349 NA intron (NM_001145952, intron 2 of 11) intron (NM_001145952, intron 2 of 11) -24473 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_179_1472_0.0548615449014953_10.5519724874866_0.544377354469913 chr12 112999650 113001447 + 0.544377354469913 NA promoter-TSS (NM_028193) promoter-TSS (NM_028193) 73 NM_028193 72308 Mm.196721 NM_028193 ENSMUSG00000011158 Brf1 2510002F24Rik|GTF3B|TAF3C|TAFIII90|TFIIIB90|mTFIIIB90 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit protein-coding common_peak2_58_361_0.10568051795862_8.55268614606252_0.544260677460642 chr7 12478059 12478979 + 0.544260677460642 NA 5' UTR (NM_026112, exon 1 of 7) 5' UTR (NM_026112, exon 1 of 7) 214 NM_026112 67370 Mm.98929 NM_026112 ENSMUSG00000030386 Zfp606 2410022M24Rik|AW494727 zinc finger protein 606 protein-coding common_peak1_61_445_-0.107605383999642_8.74709720792048_0.544014650553268 chr6 149307040 149307980 + 0.544014650553268 NA Intergenic RLTR19B|LTR|ERVK -1904 NM_001289661 67246 Mm.333515 NM_026054 ENSMUSG00000032712 2810474O19Rik 6720435I21Rik|AA536804|AU020969|GET|Kiaa1551 RIKEN cDNA 2810474O19 gene protein-coding common_peak1_24_154_-0.190109213137854_7.18106979870531_0.543791894686251-3 chr15 66813629 66814169 + 0.543791894686251 NA intron (NM_009192, intron 1 of 8) MIRb|SINE|MIR 17930 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_24_154_-0.190109213137854_7.18106979870531_0.543791894686251 chr11 116138210 116138789 + 0.543791894686251 NA exon (NM_024177, exon 2 of 9) exon (NM_024177, exon 2 of 9) 369 NM_024177 60441 Mm.29974 NM_024177 ENSMUSG00000020775 Mrpl38 1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3 mitochondrial ribosomal protein L38 protein-coding common_peak1_24_154_-0.190109213137854_7.18106979870531_0.543791894686251-2 chr13 120301322 120301939 + 0.543791894686251 NA intron (NM_001037925, intron 2 of 4) intron (NM_001037925, intron 2 of 4) 1238 NM_001037925 625360 Mm.327506 NM_001037925 ENSMUSG00000094796 BC147527 - cDNA sequence BC147527 protein-coding common_peak1_24_154_-0.190109213137854_7.18106979870531_0.543791894686251-4 chr2 157737318 157737864 + 0.543791894686251 NA intron (NM_025680, intron 1 of 15) CpG 190 NM_025680 66642 Mm.45193 NM_025680 ENSMUSG00000027649 Ctnnbl1 5730471K09Rik|NAP|NYD-SP19|P14L catenin, beta like 1 protein-coding common_peak2_164_1431_-0.0583902427250553_10.4546206559017_0.543730978961946 chr4 95165193 95167810 + 0.543730978961946 NA Intergenic ORR1E|LTR|ERVL-MaLR -114279 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak1_40_226_0.134894777774511_7.89399587617817_0.542958038394268-2 chrX 12136638 12137381 + 0.542958038394268 NA non-coding (NR_045434, exon 3 of 4) non-coding (NR_045434, exon 3 of 4) 23337 NR_045434 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_40_226_0.134894777774511_7.89399587617817_0.542958038394268 chr13 24602024 24602947 + 0.542958038394268 NA intron (NR_024599, intron 1 of 1) intron (NR_024599, intron 1 of 1) 2282 NR_024599 76024 Mm.440710 NR_024599 Gm11346 5830431A10Rik|AI447617|Gm11347|OTTMUSG00000000601|OTTMUSG00000000602 X-linked lymphocyte-regulated 5 pseudogene pseudo common_peak1_22_107_0.183573301930042_6.84667415312849_0.542919633696583-3 chr5 142896060 142896732 + 0.542919633696583 NA Intergenic Intergenic -1158 NM_001033312 231863 Mm.89753 NM_001033312 ENSMUSG00000066640 Fbxl18 AI427077|B130019G13Rik|C330021B20Rik F-box and leucine-rich repeat protein 18 protein-coding common_peak1_22_107_0.183573301930042_6.84667415312849_0.542919633696583-2 chr15 76538919 76539326 + 0.542919633696583 NA promoter-TSS (NM_013909) promoter-TSS (NM_013909) 179 NM_029643 52710 Mm.28597 NM_029643 ENSMUSG00000022560 Slc52a2 2010003P03Rik|D15Ertd747e|GPCR42|Gpr172b|PAR2|mRFT1 solute carrier protein 52, member 2 protein-coding common_peak2_22_107_0.183573301930042_6.84667415312849_0.542919633696583 chr10 94991629 94992355 + 0.542919633696583 NA Intergenic Intergenic -47414 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding common_peak1_22_107_0.183573301930042_6.84667415312849_0.542919633696583 chr11 62574174 62574643 + 0.542919633696583 NA promoter-TSS (NM_011706) promoter-TSS (NM_011706) -78 NM_011706 22368 Mm.288064 NM_011706 ENSMUSG00000018507 Trpv2 GRC|OTRPC2|VRL-1|Vrl1 transient receptor potential cation channel, subfamily V, member 2 protein-coding common_peak2_22_107_0.183573301930042_6.84667415312849_0.542919633696583-2 chr6 128975832 128976553 + 0.542919633696583 NA intron (NM_001316752, intron 1 of 5) PB1|SINE|Alu -1163 NR_045009 100504591 Mm.441029 NR_045009 Gm15987 OTTMUSG00000028624 predicted gene 15987 ncRNA common_peak2_65_416_0.100028685402574_8.75391791614595_0.54288793215464 chr11 4186192 4187603 + 0.54288793215464 NA promoter-TSS (NM_134023) promoter-TSS (NM_134023) 64 NM_134023 103724 Mm.28140 NM_134023 ENSMUSG00000034412 Tbc1d10a AI447804|EPI64|Tbc1d10|mFLJ00288 TBC1 domain family, member 10a protein-coding common_peak2_170_1381_0.0560913353151999_10.4605875680459_0.54269733947046 chr9 110116595 110118347 + 0.54269733947046 NA 5' UTR (NM_001252682, exon 1 of 23) 5' UTR (NM_001252682, exon 1 of 23) 145 NM_001252682 72831 Mm.276305 NM_133347 ENSMUSG00000032480 Dhx30 2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein-coding common_peak1_94_739_-0.082911670241101_9.48992562539576_0.542671445085624 chr3 51552515 51553920 + 0.542671445085624 NA intron (NM_080793, intron 1 of 7) intron (NM_080793, intron 1 of 7) -6540 NR_033624 100039684 Mm.387178 NR_033624 5031434O11Rik AI481280|Gm2370 RIKEN cDNA 5031434O11 gene ncRNA common_peak1_206_1753_0.0502968039553462_10.8015814344224_0.542526819163812 chr17 87445797 87447511 + 0.542526819163812 NA intron (NM_007589, intron 1 of 5) CpG 281 NM_007589 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017 calmodulin 2 protein-coding common_peak2_141_1195_-0.0642298171647315_10.1918867656157_0.542519835488326 chr15 5107286 5109373 + 0.542519835488326 NA exon (NM_001163138, exon 2 of 4) exon (NM_001163138, exon 2 of 4) 204 NM_001163138 239319 Mm.31252 NM_001163138 ENSMUSG00000041849 Card6 D730008L15 caspase recruitment domain family, member 6 protein-coding common_peak1_29_190_-0.168772395438046_7.49304263031673_0.542428973817972 chr7 35586193 35586804 + 0.542428973817972 NA promoter-TSS (NM_145840) promoter-TSS (NM_145840) 251 NM_178263 245886 Mm.272620 NM_145633 ENSMUSG00000034867 Ankrd27 AA408090|BC016493|D330003H11Rik|Varp ankyrin repeat domain 27 (VPS9 domain) protein-coding common_peak2_115_849_0.0705689058602168_9.76660348395517_0.542385776902527 chr15 98144932 98146327 + 0.542385776902527 NA promoter-TSS (NM_001170710) promoter-TSS (NM_001170710) 73 NM_030121 78541 Mm.200766 NM_030121 ENSMUSG00000048175 Asb8 4930539L19Rik|AI788835|C430011H06Rik ankyrin repeat and SOCS box-containing 8 protein-coding common_peak1_58_420_-0.11215001802457_8.66160141405411_0.542359899235581 chr3 89186768 89187809 + 0.542359899235581 NA exon (NM_001014995, exon 9 of 12) exon (NM_001014995, exon 9 of 12) 4063 NM_001014995 68521 Mm.274708 NM_001014995 ENSMUSG00000032657 Fam189b 1110013L07Rik family with sequence similarity 189, member B protein-coding common_peak2_244_2304_-0.0455692115276953_11.1477664295529_0.54230923845549 chr10 111994490 111998297 + 0.54230923845549 NA intron (NM_028608, intron 1 of 5) intron (NM_028608, intron 1 of 5) 871 NM_028608 73690 Mm.173790 NM_028608 ENSMUSG00000056888 Glipr1 2410114O14Rik|RTVP-1|RTVP1|mRTVP-1 GLI pathogenesis-related 1 (glioma) protein-coding common_peak1_79_602_-0.0916553418965957_9.19018652095179_0.542012358153103 chr5 122994667 122995852 + 0.542012358153103 NA intron (NR_045820, intron 2 of 2) intron (NR_045820, intron 2 of 2) 5905 NR_045820 109202 Mm.30769 NM_175405 ENSMUSG00000056735 A930024E05Rik - RIKEN cDNA A930024E05 gene ncRNA common_peak2_37_250_-0.144567039367526_7.89926003426701_0.541942876096767 chr17 94864246 94865379 + 0.541942876096767 NA promoter-TSS (NM_001024731) promoter-TSS (NM_001024731) -106 NM_001024731 100044193 NM_001024731 ENSMUSG00000095193 Gm20939 - predicted gene, 20939 protein-coding common_peak1_119_977_-0.0718095999818171_9.89778585496132_0.541872807122086 chr1 43539140 43541081 + 0.541872807122086 NA intron (NM_010879, intron 3 of 4) intron (NM_010879, intron 3 of 4) 94359 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_87_599_0.0842036745707819_9.27092052778127_0.541774173599124-2 chr6 29526225 29527360 + 0.541774173599124 NA intron (NM_001311083, intron 1 of 9) CpG 167 NM_012057 27056 Mm.6479 NM_012057 ENSMUSG00000029771 Irf5 AW491843|mirf5 interferon regulatory factor 5 protein-coding common_peak1_87_599_0.0842036745707819_9.27092052778127_0.541774173599124 chr4 119896585 119898316 + 0.541774173599124 NA intron (NM_010657, intron 1 of 8) intron (NM_010657, intron 1 of 8) 82772 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak1_49_292_0.117870648900492_8.25369217887249_0.541744772112238 chr1 54910202 54911286 + 0.541744772112238 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 15643 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_55_394_-0.112531781860184_8.56944295213437_0.541695725845568 chr2 167949456 167950648 + 0.541695725845568 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 17725 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak2_55_394_-0.112531781860184_8.56944295213437_0.541695725845568 chr5 135369238 135370504 + 0.541695725845568 NA promoter-TSS (NM_145414) promoter-TSS (NM_145414) -82 NM_145414 100609 Mm.281189 NM_145414 ENSMUSG00000000916 Nsun5 9830109N13Rik|AI326939|Nol1r|Wbscr20|Wbscr20a NOL1/NOP2/Sun domain family, member 5 protein-coding common_peak1_43_248_0.126408121812227_8.02320599297419_0.541647793042357 chr12 100728499 100729717 + 0.541647793042357 NA Intergenic Intergenic -4080 NM_153587 73086 Mm.220417 NM_153587 ENSMUSG00000021180 Rps6ka5 3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK|RLSK|S6K-alpha-5 ribosomal protein S6 kinase, polypeptide 5 protein-coding common_peak2_342_3461_-0.0369776631904823_11.7389011777714_0.541502834177602 chr14 56885138 56888320 + 0.541502834177602 NA Intergenic CpG -1066 NM_029498 76007 Mm.31417 NM_029498 ENSMUSG00000021945 Zmym2 5830413P05Rik|FIM|MYM|RAMP|SCLL|Zfp198|Znf198 zinc finger, MYM-type 2 protein-coding common_peak1_46_270_0.120982046072147_8.14264006438994_0.54131556431535 chr6 67367392 67368182 + 0.54131556431535 NA intron (NM_008354, intron 1 of 15) RLTR11B|LTR|ERVK 8350 NM_008354 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak1_186_1544_0.0535265513102878_10.6201543984469_0.541237759565919 chr8 106892616 106894324 + 0.541237759565919 NA promoter-TSS (NM_011574) promoter-TSS (NM_011574) 123 NM_145412 214987 Mm.490308 NM_145412 ENSMUSG00000046691 Chtf8 5830457O10Rik|Ctf8|Derpc CTF8, chromosome transmission fidelity factor 8 protein-coding common_peak1_32_171_0.151055192958782_7.50179235118149_0.541093914393469 chr1 85839875 85840581 + 0.541093914393469 NA intron (NM_133781, intron 4 of 8) intron (NM_133781, intron 4 of 8) 46781 NM_133781 12283 Mm.26135 NM_133781 ENSMUSG00000036707 Cab39 AA408805|AA960512|C78372|MO25|MO25alpha calcium binding protein 39 protein-coding common_peak1_32_171_0.151055192958782_7.50179235118149_0.541093914393469-2 chr11 115231314 115231725 + 0.541093914393469 NA intron (NM_001033393, intron 9 of 9) intron (NM_001033393, intron 9 of 9) 35724 NM_010350 14813 Mm.39090 NM_010350 ENSMUSG00000020734 Grin2c GluN2C|NMDAR2C|NR2C glutamate receptor, ionotropic, NMDA2C (epsilon 3) protein-coding common_peak1_76_506_0.090879603769725_9.0312817388882_0.541055265836272 chr18 61211019 61212100 + 0.541055265836272 NA promoter-TSS (NM_007885) promoter-TSS (NM_007885) 37 NM_007885 13521 Mm.24803 NM_007885 ENSMUSG00000034320 Slc26a2 Dtd|ST-OB solute carrier family 26 (sulfate transporter), member 2 protein-coding common_peak1_72_540_-0.0971657574411875_9.03090190510622_0.541055265836075 chr18 73753843 73754918 + 0.541055265836075 NA promoter-TSS (NM_053255) promoter-TSS (NM_053255) 99 NM_053255 114615 Mm.50642 NM_053255 ENSMUSG00000036941 Elac1 2610018O07Rik|8430417G19Rik elaC ribonuclease Z 1 protein-coding common_peak2_103_740_0.0753161347078102_9.57098779965974_0.54104888506259 chr8 119394233 119395671 + 0.54104888506259 NA promoter-TSS (NM_019966) promoter-TSS (NM_019966) 60 NM_019966 56690 Mm.423037 NM_019966 ENSMUSG00000074064 Mlycd AI324784|Mcd malonyl-CoA decarboxylase protein-coding common_peak2_99_704_0.0777603672229397_9.50035963089763_0.541002224376177 chr6 88840866 88843119 + 0.541002224376177 NA promoter-TSS (NM_030251) promoter-TSS (NM_030251) -57 NM_030251 80283 Mm.166858 NM_030251 ENSMUSG00000030083 Abtb1 AI847549|BC003234|BPOZ|EF1ABP ankyrin repeat and BTB (POZ) domain containing 1 protein-coding common_peak1_147_1152_0.0618314759323528_10.2020925356179_0.540878882745183 chr14 55577792 55579214 + 0.540878882745183 NA promoter-TSS (NM_011189) promoter-TSS (NM_011189) 9 NM_011189 19186 Mm.830 NM_011189 ENSMUSG00000022216 Psme1 AW413925|PA28a proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) protein-coding unique_peak2_27_138_0.167623677294418_7.20275291137072_0.540484846366853 chr5 113651722 113652855 + 0.540484846366853 NA Intergenic Intergenic -1898 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak1_27_138_0.167623677294418_7.20275291137072_0.540484846366853 chr17 52151746 52152283 + 0.540484846366853 NA Intergenic Intergenic 269287 NR_045095 100504169 Mm.417731 NR_045095 Gm20098 - predicted gene, 20098 ncRNA common_peak2_27_138_0.167623677294418_7.20275291137072_0.540484846366853 chr2 166034920 166035917 + 0.540484846366853 NA intron (NM_008679, intron 2 of 22) intron (NM_008679, intron 2 of 22) 42781 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak2_325_3087_0.0379997178396465_11.6114568961879_0.540117612341343 chr3 88409069 88414767 + 0.540117612341343 NA 3' UTR (NM_001281795, exon 4 of 4) 3' UTR (NM_001281795, exon 4 of 4) -1521 NM_025928 67037 Mm.36715 NM_025928 ENSMUSG00000028066 Pmf1 2600009M07Rik|AL033286|AW060657 polyamine-modulated factor 1 protein-coding common_peak2_483_5255_-0.0299580933141712_12.3447705136652_0.540015153657175 chr10 81132350 81137476 + 0.540015153657175 NA Intergenic Intergenic -1358 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak2_49_345_-0.122000724313985_8.37362786547973_0.539859743848417 chr3 87919176 87920133 + 0.539859743848417 NA 5' UTR (NM_026591, exon 1 of 6) 5' UTR (NM_026591, exon 1 of 6) 110 NM_026591 67707 Mm.393802 NM_026591 ENSMUSG00000019710 Mrpl24 2010005E08Rik|2810470K06Rik|6720473G22Rik|AA407670 mitochondrial ribosomal protein L24 protein-coding unique_peak2_22_140_-0.201090548305284_7.03900607824615_0.539810704483875 chr2 93427093 93428395 + 0.539810704483875 NA intron (NM_001271430, intron 5 of 8) intron (NM_001271430, intron 5 of 8) -5737 NR_105967 102465605 NR_105967 ENSMUSG00000099238 Mir7001 Gm27886|mmu-mir-7001 microRNA 7001 ncRNA unique_peak2_22_140_-0.201090548305284_7.03900607824615_0.539810704483875-2 chr4 106915388 106916126 + 0.539810704483875 NA intron (NM_198438, intron 4 of 16) intron (NM_198438, intron 4 of 16) 4287 NM_023672 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding unique_peak2_22_140_-0.201090548305284_7.03900607824615_0.539810704483875-3 chr9 114774843 114775871 + 0.539810704483875 NA intron (NM_001252479, intron 1 of 3) intron (NM_001252479, intron 1 of 3) 6636 NM_133978 102545 Mm.35600 NM_133978 ENSMUSG00000032436 Cmtm7 AI481279|Cklfsf7|LNV CKLF-like MARVEL transmembrane domain containing 7 protein-coding common_peak2_95_748_-0.0818218179939425_9.50791099946178_0.539683362855951 chr15 100731664 100733739 + 0.539683362855951 NA promoter-TSS (NR_045782) promoter-TSS (NR_045782) 36 NR_045781 619313 Mm.123436 NR_045781 I730030J21Rik - RIKEN cDNA I730030J21 gene ncRNA common_peak2_76_575_-0.0932034606692458_9.12332327110769_0.539639028583599 chr12 100519830 100521370 + 0.539639028583599 NA exon (NM_001033213, exon 1 of 20) exon (NM_001033213, exon 1 of 20) 222 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak1_43_297_-0.132758466581855_8.15278928717123_0.539625294187903 chr13 37870109 37871062 + 0.539625294187903 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) -17849 NR_033218 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_43_297_-0.132758466581855_8.15278928717123_0.539625294187903 chr2 68978170 68979581 + 0.539625294187903 NA intron (NM_172856, intron 3 of 9) intron (NM_172856, intron 3 of 9) 117318 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_20_95_0.192512143077342_6.68121857225983_0.539575460195755 chr10 63382266 63382830 + 0.539575460195755 NA intron (NM_001253685, intron 1 of 4) intron (NM_001253685, intron 1 of 4) 105 NM_001253685 30045 Mm.32550 NM_013888 ENSMUSG00000036764 Dnajc12 Jdp1|mJDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding unique_peak2_20_95_0.192512143077342_6.68121857225983_0.539575460195755 chr9 123259916 123260853 + 0.539575460195755 NA exon (NM_001002267, exon 1 of 1) exon (NM_001002267, exon 1 of 1) 405 NM_001002267 72309 Mm.8569 NM_001002267 ENSMUSG00000054871 Tmem158 2310037P21Rik|Ris1 transmembrane protein 158 protein-coding common_peak1_20_95_0.192512143077342_6.68121857225983_0.539575460195755 chr16 24224585 24225062 + 0.539575460195755 NA Intergenic MTC|LTR|ERVL-MaLR -168527 NM_178665 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak1_62_453_-0.104939327339132_8.77407882362135_0.539569624762839 chr5 114690329 114691191 + 0.539569624762839 NA exon (NM_019821, exon 1 of 5) exon (NM_019821, exon 1 of 5) 175 NM_019821 56356 Mm.275766 NM_019821 ENSMUSG00000011884 Gltp 1110001F24Rik|C76925|C77564 glycolipid transfer protein protein-coding common_peak2_138_1164_-0.0641294587490417_10.1540495101671_0.539358222027313 chr7 45813479 45814579 + 0.539358222027313 NA intron (NM_011181, intron 1 of 11) CpG 287 NM_011181 19158 Mm.272130 NM_011181 ENSMUSG00000003269 Cyth2 ARNO|CLM2|Pscd2 cytohesin 2 protein-coding common_peak2_69_513_-0.0975665234839891_8.95684128745188_0.539214176727284 chr1 170272335 170274612 + 0.539214176727284 NA Intergenic Intergenic -3851 NM_012009 26904 Mm.57009 NM_012009 ENSMUSG00000102418 Sh2d1b1 EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b SH2 domain containing 1B1 protein-coding common_peak1_59_369_0.103887283267747_8.58332510215019_0.539184319089992 chr2 18676881 18677598 + 0.539184319089992 NA 5' UTR (NM_007552, exon 1 of 10) 5' UTR (NM_007552, exon 1 of 10) 221 NM_007552 12151 Mm.289584 NM_007552 ENSMUSG00000026739 Bmi1 AW546694|Bmi-1|Pcgf4 Bmi1 polycomb ring finger oncogene protein-coding common_peak2_59_369_0.103887283267747_8.58332510215019_0.539184319089992-2 chr5 109751077 109752355 + 0.539184319089992 NA Intergenic Intergenic 82426 NR_027964 667213 Mm.454429 NR_027964 ENSMUSG00000105044 Gm10416 EG667213|ENSMUSG00000072761 zinc finger protein pseudogene pseudo common_peak2_59_369_0.103887283267747_8.58332510215019_0.539184319089992 chr10 80823628 80825417 + 0.539184319089992 NA Intergenic B3|SINE|B2 -2134 NM_001301034 18245 Mm.398119 NM_008753 ENSMUSG00000035242 Oaz1 AZ-1|AZ1|Antizyme|ODC-Az|Oaz ornithine decarboxylase antizyme 1 protein-coding common_peak2_259_2330_0.0434058535767416_11.2084362159172_0.538928291628435 chr10 118881392 118884505 + 0.538928291628435 NA Intergenic Intergenic -14045 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak2_32_212_-0.157389672564959_7.65601478394336_0.538760314592672 chr8 125733800 125734926 + 0.538760314592672 NA intron (NM_025636, intron 1 of 4) CpG 160 NM_001310688 66566 Mm.25296 NM_025636 ENSMUSG00000031851 Ntpcr 2310079N02Rik|AI449709 nucleoside-triphosphatase, cancer-related protein-coding unique_peak2_32_212_-0.157389672564959_7.65601478394336_0.538760314592672 chr19 53543940 53545449 + 0.538760314592672 NA Intergenic Intergenic 15376 NM_001085390 240672 Mm.482424 NM_001085390 ENSMUSG00000034765 Dusp5 Gm337 dual specificity phosphatase 5 protein-coding common_peak1_35_191_0.146335172337867_7.65813008689009_0.538760314592672 chr16 43689742 43690397 + 0.538760314592672 NA Intergenic Intergenic -25885 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak1_32_212_-0.157389672564959_7.65601478394336_0.538760314592672 chr6 21948941 21949454 + 0.538760314592672 NA promoter-TSS (NM_023626) promoter-TSS (NM_023626) -374 NM_001311061 71777 Mm.39999 NM_023626 ENSMUSG00000029670 Ing3 1300013A07Rik|P47ING3 inhibitor of growth family, member 3 protein-coding common_peak1_32_212_-0.157389672564959_7.65601478394336_0.538760314592672-2 chr8 121578112 121578667 + 0.538760314592672 NA intron (NM_133765, intron 1 of 8) B1F1|SINE|Alu 417 NM_133765 76454 Mm.24829 NM_133765 ENSMUSG00000052934 Fbxo31 1110003O08Rik|2310046N15Rik|Fbx14|Fbxo14 F-box protein 31 protein-coding common_peak1_35_191_0.146335172337867_7.65813008689009_0.538760314592672-2 chr5 72160758 72161371 + 0.538760314592672 NA intron (NM_178599, intron 3 of 4) intron (NM_178599, intron 3 of 4) 7119 NM_178599 27784 Mm.44223 NM_178599 ENSMUSG00000029213 Commd8 C77770|D5Buc26e COMM domain containing 8 protein-coding common_peak2_230_2146_-0.047250418932423_11.0444812663926_0.538750690930791 chr18 24120510 24122679 + 0.538750690930791 NA intron (NM_172625, intron 1 of 4) CpG 225 NM_172625 225280 Mm.258973 NM_172625 ENSMUSG00000047989 Ino80c D030070L09Rik INO80 complex subunit C protein-coding common_peak2_73_481_0.0935066261678053_8.95964264931386_0.538735238713313 chr17 3396465 3398478 + 0.538735238713313 NA intron (NM_011878, intron 1 of 26) intron (NM_011878, intron 1 of 26) 264 NM_011878 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak1_108_785_0.0733567332710301_9.65506386889412_0.53867955083673-2 chrX 151803167 151804258 + 0.53867955083673 NA intron (NM_021523, intron 1 of 82) CpG 430 NM_021523 59026 Mm.27372 NM_021523 ENSMUSG00000025261 Huwe1 5430439H10Rik|AU041296|Arf-bp1|C430014N20Rik|C80292|Gm1718|Ib772|LASU1|Mule|Ureb1 HECT, UBA and WWE domain containing 1 protein-coding common_peak1_108_785_0.0733567332710301_9.65506386889412_0.53867955083673 chr2 90678843 90679928 + 0.53867955083673 NA 5' UTR (NM_021512, exon 2 of 37) 5' UTR (NM_021512, exon 2 of 37) 2170 NM_021512 59015 Mm.24532 NM_021512 ENSMUSG00000051329 Nup160 160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197 nucleoporin 160 protein-coding common_peak1_333_3182_0.0371874752383938_11.6547651792551_0.5386593804661 chr5 147429664 147431507 + 0.5386593804661 NA promoter-TSS (NM_028291) promoter-TSS (NM_028291) 5 NM_028291 72587 Mm.320469 NM_028291 ENSMUSG00000029647 Pan3 2700050F09Rik|A430027N15Rik|AU014670 PAN3 poly(A) specific ribonuclease subunit protein-coding common_peak2_66_424_0.0992246691246592_8.78093136558739_0.538483668762641 chr6 128855562 128857270 + 0.538483668762641 NA intron (NM_001254946, intron 2 of 2) RMER17C-int|LTR|ERVK -30101 NM_030599 80782 Mm.6180 NM_030599 ENSMUSG00000079298 Klrb1b Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d|ly-55b|ly-55d killer cell lectin-like receptor subfamily B member 1B protein-coding common_peak2_112_908_-0.072616986021707_9.79182799118325_0.538298770718802 chr10 117434312 117436079 + 0.538298770718802 NA Intergenic Intergenic -58222 NM_001310609 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding common_peak2_56_345_0.109870491913448_8.48956347359345_0.538197981351132 chr11 60045651 60046933 + 0.538197981351132 NA intron (NM_001290012, intron 1 of 6) CpG 197 NM_001290012 18618 Mm.2731 NM_008819 ENSMUSG00000000301 Pemt PEAMT|PEMT2|PLMT|Pempt|Pempt2 phosphatidylethanolamine N-methyltransferase protein-coding common_peak1_56_345_0.109870491913448_8.48956347359345_0.538197981351132 chr16 5233140 5234247 + 0.538197981351132 NA promoter-TSS (NM_145362) promoter-TSS (NM_145362) 72 NM_145362 208211 Mm.34581 NM_145362 ENSMUSG00000039427 Alg1 HMAT1|HMT1 asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase) protein-coding common_peak1_12_50_0.256383591483082_5.80061713771304_0.538129021504633 chr13 114924671 114925020 + 0.538129021504633 NA intron (NM_008396, intron 1 of 29) URR1B|DNA|hAT-Charlie 7196 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak2_121_905_0.0677645221870939_9.85724950113978_0.538100778238523 chr15 89314176 89316154 + 0.538100778238523 NA 5' UTR (NM_001170561, exon 1 of 41) 5' UTR (NM_001170561, exon 1 of 41) 146 NM_001081030 77980 Mm.35483 NM_030019 ENSMUSG00000036529 Sbf1 2610510A08Rik|B230113C15Rik|Mtmr5|mKIAA3020 SET binding factor 1 protein-coding common_peak2_100_713_0.0770679295763586_9.51831422881728_0.538055035278681 chr2 3751632 3755447 + 0.538055035278681 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 40081 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_27_175_-0.172866868619372_7.37299818432761_0.537988484076517 chr10 10307015 10308157 + 0.537988484076517 NA Intergenic L1M2a|LINE|L1 164728 NM_001127353 215772 Mm.246573 NM_172547 ENSMUSG00000050994 Adgb 9130014G24Rik androglobin protein-coding common_peak1_27_175_-0.172866868619372_7.37299818432761_0.537988484076517 chr17 87265336 87265907 + 0.537988484076517 NA intron (NM_176808, intron 1 of 4) intron (NM_176808, intron 1 of 4) 326 NM_176808 193813 Mm.30251 NM_139295 ENSMUSG00000024150 Mcfd2 1810021C21Rik|F5f8d|Lman1ip|Sdnsf multiple coagulation factor deficiency 2 protein-coding unique_peak2_27_175_-0.172866868619372_7.37299818432761_0.537988484076517 chr1 43070119 43071363 + 0.537988484076517 NA intron (NM_001013025, intron 4 of 12) intron (NM_001013025, intron 4 of 12) 27881 NM_001013025 73122 Mm.246069 NM_001013025 ENSMUSG00000070939 Tgfbrap1 3110018K12Rik|AU024090|AU042859|AW742551|Trap1 transforming growth factor, beta receptor associated protein 1 protein-coding common_peak1_92_643_0.0798998427729725_9.3708667995011_0.537890780382994 chr13 51747172 51748287 + 0.537890780382994 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 46018 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_96_678_0.0780705991186768_9.44630306380407_0.53782138718466 chr16 4474546 4475793 + 0.53782138718466 NA Intergenic CpG 47884 NM_175347 106393 Mm.35811 NM_175347 ENSMUSG00000022519 Srl 9830004M20Rik|AW108387|sar sarcalumenin protein-coding unique_peak2_18_83_0.20804678061813_6.49634081308783_0.537718187625393 chr12 111896896 111897654 + 0.537718187625393 NA intron (NM_011625, intron 1 of 16) intron (NM_011625, intron 1 of 16) 10780 NM_011625 21981 Mm.313076 NM_011625 ENSMUSG00000021285 Ppp1r13b AI449786|ASPP1|AW545810|Tp53bp2|Trp53bp2|p85 protein phosphatase 1, regulatory (inhibitor) subunit 13B protein-coding common_peak1_18_83_0.20804678061813_6.49634081308783_0.537718187625393 chr7 66373188 66373665 + 0.537718187625393 NA intron (NM_146191, intron 2 of 33) L1_Mur2|LINE|L1 8298 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_284_2613_0.0405608806330626_11.372323866112_0.537598350760314 chr10 127320266 127324682 + 0.537598350760314 NA intron (NM_001285785, intron 1 of 15) intron (NM_001285785, intron 1 of 15) 510 NM_001285785 216445 Mm.227198 NM_146011 ENSMUSG00000040345 Arhgap9 AU043488 Rho GTPase activating protein 9 protein-coding common_peak1_66_487_-0.100193637413163_8.88064051885631_0.537125070756633 chr1 51577994 51579107 + 0.537125070756633 NA Intergenic Lx9|LINE|L1 -100151 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak1_130_1084_-0.066392065484969_10.0502832945894_0.537044145664836 chr6 120527849 120530234 + 0.537044145664836 NA intron (NM_144815, intron 1 of 7) intron (NM_144815, intron 1 of 7) 2258 NM_144815 214932 Mm.255322 NM_144815 ENSMUSG00000058979 Cecr5 A930002G03Rik cat eye syndrome chromosome region, candidate 5 protein-coding common_peak1_77_515_0.0883285053709635_9.05539150810874_0.53699329304647-2 chr8 109868047 109869199 + 0.53699329304647 NA promoter-TSS (NM_001122594) promoter-TSS (NM_001122594) 20 NM_001122594 244650 Mm.23494 NM_001122594 ENSMUSG00000031732 Phlpp2 AI481772|C130044A18Rik|Phlppl PH domain and leucine rich repeat protein phosphatase 2 protein-coding common_peak1_77_515_0.0883285053709635_9.05539150810874_0.53699329304647 chr3 95106025 95106975 + 0.53699329304647 NA 5' UTR (NM_001293707, exon 1 of 15) 5' UTR (NM_001293707, exon 1 of 15) 430 NM_001293707 18720 Mm.296409 NM_008847 ENSMUSG00000028126 Pip5k1a PI4P5K-I[a]|PIP5K1-alpha|PIP5KIalpha|Pipk5a phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha protein-coding common_peak2_38_212_0.138233829382022_7.80382653491685_0.536774227053051 chr18 38185119 38186419 + 0.536774227053051 NA Intergenic Intergenic 23993 NM_029357 75599 Mm.36560 NM_029357 ENSMUSG00000051375 Pcdh1 2010005A06Rik|AI585920 protocadherin 1 protein-coding common_peak1_35_234_-0.145219273505976_7.80390730981201_0.536774227053051 chr10 43901289 43902103 + 0.536774227053051 NA promoter-TSS (NM_130892) promoter-TSS (NM_130892) 40 NM_001081054 76563 Mm.5904 NM_001081054 ENSMUSG00000019863 Qrsl1 2700038P16Rik|C80053|GatA glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 protein-coding common_peak2_38_212_0.138233829382022_7.80382653491685_0.536774227053051-2 chr7 16367838 16369381 + 0.536774227053051 NA exon (NM_019748, exon 4 of 9) exon (NM_019748, exon 4 of 9) 19287 NM_001285892 56459 Mm.258530 NM_019748 ENSMUSG00000052833 Sae1 2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a SUMO1 activating enzyme subunit 1 protein-coding unique_peak2_20_126_-0.211210042973668_6.88307966528533_0.536760323636035 chr14 17660125 17660908 + 0.536760323636035 NA promoter-TSS (NM_001113417) promoter-TSS (NM_001113417) -444 NM_001113417 21834 Mm.32563 NM_009380 ENSMUSG00000021779 Thrb Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta thyroid hormone receptor beta protein-coding common_peak1_20_126_-0.211210042973668_6.88307966528533_0.536760323636035-2 chr4 46564055 46564492 + 0.536760323636035 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) 2167 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak1_20_126_-0.211210042973668_6.88307966528533_0.536760323636035 chr11 101465603 101466040 + 0.536760323636035 NA exon (NM_012037, exon 1 of 6) exon (NM_012037, exon 1 of 6) 378 NM_012037 26949 Mm.29210 NM_012037 ENSMUSG00000034993 Vat1 VAT-1 vesicle amine transport 1 protein-coding common_peak1_56_402_-0.110137308977794_8.59956737403907_0.536724797456209 chr3 95110946 95111651 + 0.536724797456209 NA intron (NM_009336, intron 1 of 5) intron (NM_009336, intron 1 of 5) 256 NM_009336 21427 Mm.133919 NM_009336 ENSMUSG00000008958 Vps72 Tcfl1|YL-1 vacuolar protein sorting 72 protein-coding common_peak2_70_457_0.0939557577500736_8.88618166697198_0.536126401066327 chr6 47877231 47878859 + 0.536126401066327 NA intron (NM_146175, intron 1 of 7) CpG 490 NM_146175 101095 Mm.440186 NM_146175 ENSMUSG00000025821 Zfp282 AI449432|C81429|E430019K09Rik|HUB1 zinc finger protein 282 protein-coding common_peak1_336_3218_0.0367859536659516_11.6707898383107_0.53603510628031 chr10 116580392 116582968 + 0.53603510628031 NA promoter-TSS (NM_001037846) promoter-TSS (NM_001037846) -169 NM_001037846 72068 Mm.351553 NM_028082 ENSMUSG00000020166 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650 CCR4-NOT transcription complex, subunit 2 protein-coding common_peak1_140_1085_0.0624572157749412_10.1160369956918_0.53600651895709 chr5 24029581 24030789 + 0.53600651895709 NA 5' UTR (NM_001310471, exon 1 of 11) 5' UTR (NM_001310471, exon 1 of 11) 127 NM_001310471 84652 Mm.304976 NM_053090 ENSMUSG00000028995 Fam126a AB030242|Drctnnb1a family with sequence similarity 126, member A protein-coding common_peak2_140_1085_0.0624572157749412_10.1160369956918_0.53600651895709 chr1 88093365 88096055 + 0.53600651895709 NA promoter-TSS (NM_201642) promoter-TSS (NM_201642) -291 NM_201642 394432 Mm.300095 NM_201642 ENSMUSG00000090124 Ugt1a7c A10'|A13|Ugt1a10 UDP glucuronosyltransferase 1 family, polypeptide A7C protein-coding common_peak2_169_1371_0.0561893928660346_10.4501594626058_0.535893328678359 chr12 112827651 112830391 + 0.535893328678359 NA 5' UTR (NM_028023, exon 1 of 2) 5' UTR (NM_028023, exon 1 of 2) 368 NM_028023 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding common_peak2_113_918_-0.0728100205525042_9.80751604101278_0.535650146344874 chr5 65955017 65957004 + 0.535650146344874 NA Intergenic Intergenic -11114 NM_001081104 231252 Mm.140015 NM_001081104 ENSMUSG00000029205 Chrna9 2410015I05Rik|Acra9|EG666827|Gm8311 cholinergic receptor, nicotinic, alpha polypeptide 9 protein-coding common_peak1_50_300_0.114051100367755_8.29064522694358_0.53558872963414 chr19 21273735 21274836 + 0.53558872963414 NA intron (NM_009551, intron 1 of 5) intron (NM_009551, intron 1 of 5) 2007 NM_009551 22682 Mm.292405 NM_009551 ENSMUSG00000024750 Zfand5 2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216 zinc finger, AN1-type domain 5 protein-coding common_peak1_53_377_-0.113422546195121_8.50553115112351_0.535583255784265 chr4 134092525 134093328 + 0.535583255784265 NA TTS (NM_013706) TTS (NM_013706) 2147 NM_013706 23833 Mm.24130 NM_013706 ENSMUSG00000000682 Cd52 AI463198|B7|B7-Ag|CAMPATH-1|CLS1|MB7 CD52 antigen protein-coding common_peak2_47_277_0.121446706554945_8.17966442600098_0.535501890835266 chr2 103072880 103074386 + 0.535501890835266 NA promoter-TSS (NM_019735) promoter-TSS (NM_019735) -42 NM_019735 56369 Mm.24772 NM_019735 ENSMUSG00000010911 Apip APIP2|CGI-29|Mmrp19 APAF1 interacting protein protein-coding common_peak2_105_758_0.0743980012140018_9.60515507602247_0.535498016895074 chr2 25548276 25550676 + 0.535498016895074 NA Intergenic Intergenic -2536 NM_009422 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding common_peak2_159_1378_-0.0584355803241365_10.4001889513519_0.535391029085094-2 chr7 106439326 106442439 + 0.535391029085094 NA intron (NR_003967, intron 1 of 2) intron (NR_003967, intron 1 of 2) 191 NR_003967 209380 Mm.461779 NM_001001318 Gm4759 EG209380 GTPase, very large interferon inducible 1 pseudogene pseudo common_peak2_159_1378_-0.0584355803241365_10.4001889513519_0.535391029085094 chr11 5761190 5763058 + 0.535391029085094 NA promoter-TSS (NR_015577) promoter-TSS (NR_015577) -26 NR_015577 76508 Mm.260203 NR_015577 ENSMUSG00000083844 Ube2d-ps 1600028I17Rik|2210015D19Rik|AI596465 ubiquitin-conjugating enzyme E2D, pseudogene ncRNA common_peak1_44_255_0.126178637564632_8.06308931878232_0.535335150972827 chr2 28241760 28242685 + 0.535335150972827 NA Intergenic Intergenic 36533 NM_019498 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding common_peak2_101_722_0.0764312513626955_9.53606746263246_0.535179367643091 chr5 138116266 138117874 + 0.535179367643091 NA intron (NM_001044703, intron 1 of 3) CpG 165 NM_001044705 22697 Mm.2760 NM_011757 ENSMUSG00000037017 Zscan21 AI326272|CTfin51|RU49|Zfp-38|Zfp38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding common_peak1_109_879_-0.0734563839523883_9.74463152154847_0.535168378631739 chr19 23134493 23136340 + 0.535168378631739 NA Intergenic CpG -5810 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971 Kruppel-like factor 9 protein-coding common_peak1_30_158_0.153799249449951_7.38978258000933_0.535156070593048 chr13 43304441 43304844 + 0.535156070593048 NA promoter-TSS (NM_001033399) promoter-TSS (NM_001033399) -470 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak1_30_158_0.153799249449951_7.38978258000933_0.535156070593048-2 chr2 30286541 30287012 + 0.535156070593048 NA promoter-TSS (NM_177648) promoter-TSS (NM_177648) 343 NM_198304 227699 Mm.330119 NM_198304 ENSMUSG00000052533 Nup188 BC025526|U89435|mKIAA0169 nucleoporin 188 protein-coding unique_peak2_38_257_-0.138283805815393_7.94208535251556_0.535068564417406 chr19 40617265 40618941 + 0.535068564417406 NA intron (NM_001304721, intron 1 of 9) intron (NM_001304721, intron 1 of 9) 5737 NM_001304721 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding unique_peak2_41_234_0.127570008419855_7.94030195077493_0.535068564417406 chr5 31153727 31154851 + 0.535068564417406 NA promoter-TSS (NM_001294324) promoter-TSS (NM_001294324) -38 NM_008622 17527 Mm.271923 NM_008622 ENSMUSG00000107283 Mpv17 Tg.Mpv17 MpV17 mitochondrial inner membrane protein protein-coding common_peak1_38_257_-0.138283805815393_7.94208535251556_0.535068564417406 chr18 35553160 35553962 + 0.535068564417406 NA intron (NR_038073, intron 1 of 3) intron (NR_038073, intron 1 of 3) 151 NR_038073 100503380 Mm.482118 NR_038073 ENSMUSG00000097769 Snhg4 Gm17457 small nucleolar RNA host gene 4 ncRNA common_peak2_41_234_0.127570008419855_7.94030195077493_0.535068564417406 chr17 46545731 46546741 + 0.535068564417406 NA TTS (NM_020493) TTS (NM_020493) 152 NM_001081335 78309 Mm.329076 NM_001081335 ENSMUSG00000040327 Cul9 1810035I07Rik|Cul-9|Parc|mKIAA0708 cullin 9 protein-coding common_peak1_16_72_0.213711702094154_6.2966804099271_0.535042315425563-2 chrX 20271274 20271688 + 0.535042315425563 NA intron (NM_177353, intron 1 of 16) MLT1J|LTR|ERVL-MaLR 20283 NM_177353 236727 Mm.132983 NM_177353 ENSMUSG00000037341 Slc9a7 A530087D17Rik|NHE7 solute carrier family 9 (sodium/hydrogen exchanger), member 7 protein-coding unique_peak2_16_72_0.213711702094154_6.2966804099271_0.535042315425563 chr2 122467352 122467838 + 0.535042315425563 NA non-coding (NR_027919, exon 1 of 1) non-coding (NR_027919, exon 1 of 1) 202 NR_027919 81913 Mm.122640 NR_027919 Bambi-ps1 - BMP and activin membrane-bound inhibitor, pseudogene (Xenopus laevis) pseudo common_peak1_16_72_0.213711702094154_6.2966804099271_0.535042315425563 chr3 36552006 36552420 + 0.535042315425563 NA promoter-TSS (NM_019393) promoter-TSS (NM_019393) -393 NM_019393 50911 Mm.116711 NM_019393 ENSMUSG00000027714 Exosc9 PM/Scl-75|Pmscl1|RRP45|p5|p6 exosome component 9 protein-coding common_peak1_18_112_-0.219814759018298_6.71027158290604_0.535002055111823-4 chr5 119321995 119322443 + 0.535002055111823 NA Intergenic Intergenic -122201 NR_046033 665194 Mm.491047 NR_046033 ENSMUSG00000107334 Gm7538 EG665194 predicted gene 7538 ncRNA common_peak1_18_112_-0.219814759018298_6.71027158290604_0.535002055111823-3 chr4 134929955 134930381 + 0.535002055111823 NA promoter-TSS (NM_026780) promoter-TSS (NM_026780) -812 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding common_peak1_18_112_-0.219814759018298_6.71027158290604_0.535002055111823 chr19 11092030 11092516 + 0.535002055111823 NA Intergenic CpG -11170 NM_022430 64381 Mm.34460 NM_022430 ENSMUSG00000024730 Ms4a8a 2010004L09Rik|AI481240|CD20L5|Ms4a8 membrane-spanning 4-domains, subfamily A, member 8A protein-coding common_peak1_18_112_-0.219814759018298_6.71027158290604_0.535002055111823-2 chr4 88031640 88032213 + 0.535002055111823 NA intron (NM_027326, intron 1 of 10) CpG 1481 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak1_89_617_0.0813279208466131_9.31212698832768_0.534953343020805 chr19 3912125 3912965 + 0.534953343020805 NA TTS (NM_026316) TTS (NM_026316) 229 NM_144870 225887 Mm.44227 NM_144870 ENSMUSG00000059734 Ndufs8 BC021616|CI-23kD|TYKY NADH dehydrogenase (ubiquinone) Fe-S protein 8 protein-coding common_peak2_89_617_0.0813279208466131_9.31212698832768_0.534953343020805 chr13 100668914 100670517 + 0.534953343020805 NA 5' UTR (NM_183115, exon 1 of 12) 5' UTR (NM_183115, exon 1 of 12) 234 NM_001168386 76041 Mm.23977 NM_183115 ENSMUSG00000048924 Ccdc125 5830436D01Rik|AL023012 coiled-coil domain containing 125 protein-coding common_peak2_150_1182_0.0602860266457625_10.2383773716627_0.534919006799052 chr7 45051994 45055100 + 0.534919006799052 NA promoter-TSS (NM_175022) promoter-TSS (NM_175022) -666 NM_175022 233210 Mm.219137 NM_175022 ENSMUSG00000046574 Prr12 6720469B10|BC058674 proline rich 12 protein-coding common_peak1_118_877_0.068995240704286_9.8125747498875_0.534867052634055 chr14 26066514 26067702 + 0.534867052634055 NA promoter-TSS (NM_001270499).2 promoter-TSS (NM_001270499).2 -105 NM_025311 66039 Mm.33344 NM_025311 ENSMUSG00000072676 Tmem254a 0610008K04Rik|0610010A22Rik|AA960404|D14Ertd449e|Tmem254 transmembrane protein 254a protein-coding common_peak2_97_687_0.0772237933949427_9.46487665139957_0.534804165034468 chr16 4474444 4475887 + 0.534804165034468 NA Intergenic CpG 47888 NM_175347 106393 Mm.35811 NM_175347 ENSMUSG00000022519 Srl 9830004M20Rik|AW108387|sar sarcalumenin protein-coding common_peak1_14_61_0.227847811024473_6.06812021589911_0.534695158203314 chr2 34954163 34954589 + 0.534695158203314 NA intron (NM_009421, intron 6 of 10) intron (NM_009421, intron 6 of 10) 7396 NM_009421 22029 Mm.239514 NM_009421 ENSMUSG00000026875 Traf1 4732496E14Rik TNF receptor-associated factor 1 protein-coding unique_peak2_12_73_-0.280644432174373_6.06913114954176_0.534695158203301 chr13 24609168 24609656 + 0.534695158203301 NA intron (NM_001286100, intron 1 of 22) B4A|SINE|B4 -4645 NR_024599 76024 Mm.440710 NR_024599 Gm11346 5830431A10Rik|AI447617|Gm11347|OTTMUSG00000000601|OTTMUSG00000000602 X-linked lymphocyte-regulated 5 pseudogene pseudo unique_peak2_12_73_-0.280644432174373_6.06913114954176_0.534695158203301-2 chr19 21917489 21918147 + 0.534695158203301 NA Intergenic Intergenic 139478 NM_031997 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_12_73_-0.280644432174373_6.06913114954176_0.534695158203301 chr2 144550534 144550939 + 0.534695158203301 NA exon (NM_015754, exon 1 of 5) exon (NM_015754, exon 1 of 5) 123 NM_015754 26450 Mm.440564 NM_015754 ENSMUSG00000027428 Rbbp9 Bog retinoblastoma binding protein 9 protein-coding unique_peak2_12_73_-0.280644432174373_6.06913114954176_0.534695158203301-3 chr5 38598850 38599529 + 0.534695158203301 NA Intergenic Intergenic -37594 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding common_peak2_85_655_-0.0852125231777787_9.3149457430292_0.53458572431446 chr4 125130596 125132680 + 0.53458572431446 NA Intergenic Intergenic -3757 NM_153159 230738 Mm.402 NM_153159 ENSMUSG00000042677 Zc3h12a BC036563|MCPIP|MCPIP-1|Mcpip1|Reg1 zinc finger CCCH type containing 12A protein-coding common_peak2_74_490_0.0905704939749743_8.98486446130218_0.534509944868989 chr15 27708516 27710160 + 0.534509944868989 NA Intergenic Intergenic -27796 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_25_126_0.166736557868767_7.07205296570655_0.534477550943962 chr18 80537549 80538178 + 0.534477550943962 NA Intergenic Intergenic 6683 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak2_25_126_0.166736557868767_7.07205296570655_0.534477550943962 chr15 57921057 57922175 + 0.534477550943962 NA intron (NM_001167679, intron 3 of 17) Lx9|LINE|L1 9417 NM_001167679 210544 Mm.390835 NM_199300 ENSMUSG00000022364 Tbc1d31 4B3|D330013L20Rik|Gm85|Wdr67 TBC1 domain family, member 31 protein-coding common_peak2_25_126_0.166736557868767_7.07205296570655_0.534477550943962-2 chr3 101799875 101801080 + 0.534477550943962 NA Intergenic Intergenic 35746 NM_172295 242125 Mm.32900 NM_172295 ENSMUSG00000044313 Mab21l3 - mab-21-like 3 (C. elegans) protein-coding common_peak2_118_966_-0.0702997092371973_9.88222222485824_0.534079731035525 chr13 113868932 113871450 + 0.534079731035525 NA intron (NM_172595, intron 1 of 4) intron (NM_172595, intron 1 of 4) 75683 NM_172595 218639 Mm.79837 NM_172595 ENSMUSG00000042348 Arl15 A430036I03|Arfrp2|C230032K13Rik ADP-ribosylation factor-like 15 protein-coding common_peak1_41_281_-0.135464397413939_8.07181915369182_0.533591943838717 chr3 146450291 146451100 + 0.533591943838717 NA intron (NM_001293672, intron 1 of 6) intron (NM_001293672, intron 1 of 6) 228 NM_001293672 74245 Mm.45396 NM_028836 ENSMUSG00000028189 Ctbs 2210401K11Rik|CTB chitobiase, di-N-acetyl- protein-coding common_peak2_282_2590_0.0408487892626699_11.3597176948114_0.533474277439439 chr2 71812522 71815911 + 0.533474277439439 NA intron (NM_001277970, intron 1 of 24) intron (NM_001277970, intron 1 of 24) 27277 NM_001277970 16403 Mm.225096 NM_008397 ENSMUSG00000027111 Itga6 5033401O05Rik|AI115430|Cd49f|VLA-6 integrin alpha 6 protein-coding common_peak1_218_1882_0.047636257924685_10.9026354135766_0.533390638217827 chr4 88032266 88034653 + 0.533390638217827 NA promoter-TSS (NM_027326) promoter-TSS (NM_027326) -52 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding unique_peak2_30_197_-0.162674415345303_7.54801941240696_0.533383850886869 chr12 85602298 85603614 + 0.533383850886869 NA intron (NM_001205053, intron 1 of 3) MIR|SINE|MIR 2938 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak2_60_436_-0.106970018453627_8.71800446027379_0.533184255475517 chr18 60848092 60849645 + 0.533184255475517 NA promoter-TSS (NM_001198984) promoter-TSS (NM_001198984) 96 NM_011552 21453 Mm.486251 NM_011552 ENSMUSG00000024613 Tcof1 AA408847|AW209012|treacle treacle ribosome biogenesis factor 1 protein-coding unique_peak2_60_436_-0.106970018453627_8.71800446027379_0.533184255475517 chr13 46690026 46692274 + 0.533184255475517 NA intron (NM_175749, intron 16 of 21) Lx8|LINE|L1 21628 NM_001033192 97863 Mm.275934 NM_001033192 ENSMUSG00000069237 Fam8a1 C78339 family with sequence similarity 8, member A1 protein-coding common_peak1_60_436_-0.106970018453627_8.71800446027379_0.533184255475517 chr14 20172906 20173946 + 0.533184255475517 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 8356 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak1_235_2066_0.0454283539890916_11.03603685042_0.533184158965303 chr13 8869772 8871683 + 0.533184158965303 NA intron (NM_001039388, intron 1 of 13) intron (NM_001039388, intron 1 of 13) 317 NM_001039389 207615 Mm.284654 NM_172445 ENSMUSG00000021147 Wdr37 - WD repeat domain 37 protein-coding common_peak2_57_353_0.107670075615928_8.52144058789096_0.533025568943054 chr3 84680337 84682280 + 0.533025568943054 NA intron (NM_177260, intron 1 of 6) intron (NM_177260, intron 1 of 6) 15116 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding common_peak1_202_1712_0.0498899876940389_10.767254429931_0.532894026500082 chr17 10317470 10319863 + 0.532894026500082 NA intron (NM_001159516, intron 1 of 6) (CCCG)n|Simple_repeat|Simple_repeat 695 NM_021881 19317 Mm.130694 NM_021881 ENSMUSG00000062078 Qk 1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1 quaking protein-coding common_peak1_106_767_0.0740079186346172_9.62196646003846_0.532817773318205 chr5 124082464 124084052 + 0.532817773318205 NA intron (NM_019875, intron 3 of 11) intron (NM_019875, intron 3 of 11) 12540 NM_019875 56325 Mm.254839 NM_019875 ENSMUSG00000029408 Abcb9 TAPL|mKIAA1520 ATP-binding cassette, sub-family B (MDR/TAP), member 9 protein-coding common_peak1_132_1104_-0.0659303416164327_10.0768654834706_0.532672786793687 chr14 55946480 55948428 + 0.532672786793687 NA Intergenic Intergenic -2793 NM_010780 17228 Mm.1252 NM_010780 ENSMUSG00000022225 Cma1 MMCP-5|Mcp-5|Mcp5|Mcpt5 chymase 1, mast cell protein-coding common_peak2_314_2960_0.0378459716525477_11.5507917610038_0.53266058275871 chr2 181375932 181382975 + 0.53266058275871 NA intron (NM_144894, intron 4 of 6) intron (NM_144894, intron 4 of 6) -1782 NM_023684 72699 Mm.440138 NM_023684 ENSMUSG00000090077 Lime1 2810038K19Rik|LIME Lck interacting transmembrane adaptor 1 protein-coding common_peak1_25_161_-0.184428758243692_7.24763562376278_0.532598659084714 chr15 84856126 84856603 + 0.532598659084714 NA promoter-TSS (NR_030731) promoter-TSS (NR_030731) -235 NR_030731 271305 Mm.101022 NM_001081166 ENSMUSG00000016624 Phf21b A730032D07Rik PHD finger protein 21B protein-coding common_peak2_25_161_-0.184428758243692_7.24763562376278_0.532598659084714 chr9 101250960 101251788 + 0.532598659084714 NA intron (NM_001161362, intron 1 of 13) CpG 458 NM_001161362 235542 Mm.335386 NM_172144 ENSMUSG00000043154 Ppp2r3a 3222402P14Rik|A730042E07 protein phosphatase 2, regulatory subunit B'', alpha protein-coding common_peak1_25_161_-0.184428758243692_7.24763562376278_0.532598659084714-2 chr18 50128171 50128658 + 0.532598659084714 NA intron (NM_008292, intron 1 of 23) CpG 213 NM_008292 15488 Mm.277857 NM_008292 ENSMUSG00000024507 Hsd17b4 17-beta-HSD|17[b]-HSD|DBP|MFE-2|MFP2|MPF-2|Mfp-2|perMFE-2 hydroxysteroid (17-beta) dehydrogenase 4 protein-coding common_peak1_25_161_-0.184428758243692_7.24763562376278_0.532598659084714-3 chr3 101275269 101275769 + 0.532598659084714 NA TTS (NM_013486) TTS (NM_013486) 12420 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding common_peak1_82_557_0.0853845573391609_9.16681359049877_0.532576142473696 chr7 45591415 45593032 + 0.532576142473696 NA Intergenic Intergenic -17047 NR_038165 71661 Mm.439894 NR_038165 ENSMUSG00000109644 0610005C13Rik AI182092 RIKEN cDNA 0610005C13 gene ncRNA unique_peak2_16_99_-0.240319928800552_6.52369622537445_0.532562714954094-2 chr4 137641148 137641997 + 0.532562714954094 NA intron (NM_130879, intron 23 of 27) intron (NM_130879, intron 23 of 27) -23154 NM_029563 110351 Mm.180763 NM_029563 ENSMUSG00000041351 Rap1gap 1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Gap|Rap1GAP1|Rap1ga1 Rap1 GTPase-activating protein protein-coding unique_peak2_16_99_-0.240319928800552_6.52369622537445_0.532562714954094 chr3 35732015 35732735 + 0.532562714954094 NA Intergenic Intergenic -21763 NM_029570 76295 Mm.239416 NM_029570 ENSMUSG00000037400 Atp11b 1110019I14Rik|ATPIF|ATPIR|mKIAA0956 ATPase, class VI, type 11B protein-coding common_peak2_186_1662_-0.0526547791852447_10.6732450636946_0.532555474769156 chr5 72913560 72915638 + 0.532555474769156 NA 5' UTR (NM_001113423, exon 1 of 8) 5' UTR (NM_001113423, exon 1 of 8) 237 NM_153567 75991 Mm.121285 NM_153567 ENSMUSG00000036087 Slain2 5033405K12Rik|8030444K12Rik|AI596370 SLAIN motif family, member 2 protein-coding common_peak1_71_465_0.0937238395910995_8.91104806444983_0.532214818332565 chr5 33781973 33782958 + 0.532214818332565 NA intron (NM_019694, intron 1 of 13) CpG 239 NM_019694 56384 Mm.260538 NM_019694 ENSMUSG00000005299 Letm1 - leucine zipper-EF-hand containing transmembrane protein 1 protein-coding common_peak1_151_1296_-0.0607616272957419_10.3105819506038_0.532213917712404 chr19 6857490 6859303 + 0.532213917712404 NA promoter-TSS (NM_001081291) promoter-TSS (NM_001081291) -185 NM_001081291 78317 Mm.329596 NM_198008 ENSMUSG00000047810 Ccdc88b 2610041P08Rik|Ccdc88 coiled-coil domain containing 88B protein-coding common_peak1_33_178_0.146332794896271_7.55698217471239_0.532146755286645 chr17 26780855 26781473 + 0.532146755286645 NA promoter-TSS (NM_172149) promoter-TSS (NM_172149) 85 NM_172149 224630 Mm.21795 NM_172149 ENSMUSG00000024191 Bnip1 2010005M06Rik|5930429G21Rik|Sec20 BCL2/adenovirus E1B interacting protein 1 protein-coding common_peak2_33_178_0.146332794896271_7.55698217471239_0.532146755286645-2 chr9 62121920 62122724 + 0.532146755286645 NA TTS (NR_039595) TTS (NR_039595) 272 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA common_peak1_33_178_0.146332794896271_7.55698217471239_0.532146755286645-2 chr2 132688438 132689141 + 0.532146755286645 NA Intergenic Intergenic -1494 NM_028637 73747 Mm.284114 NM_028637 ENSMUSG00000044991 1110034G24Rik - RIKEN cDNA 1110034G24 gene protein-coding common_peak2_33_178_0.146332794896271_7.55698217471239_0.532146755286645 chr2 178497634 178499001 + 0.532146755286645 NA Intergenic Intergenic 67802 NM_198656 381409 Mm.330860 NM_198656 ENSMUSG00000039155 Cdh26 Gm1010 cadherin-like 26 protein-coding common_peak1_14_86_-0.26089937443738_6.31249380863004_0.532092135025271 chr12 85623867 85624249 + 0.532092135025271 NA intron (NM_001205052, intron 2 of 3) intron (NM_001205052, intron 2 of 3) 24040 NM_001205053 81703 Mm.103560 NM_030887 ENSMUSG00000034271 Jdp2 Jundm2|Jundp2|TIF Jun dimerization protein 2 protein-coding common_peak1_14_86_-0.26089937443738_6.31249380863004_0.532092135025271-5 chr7 99381536 99381933 + 0.532092135025271 NA 5' UTR (NM_201352, exon 1 of 18) 5' UTR (NM_201352, exon 1 of 18) 185 NM_201352 233552 Mm.286317 NM_201352 ENSMUSG00000035314 Gdpd5 BC024955|Gde2 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding unique_peak2_14_86_-0.26089937443738_6.31249380863004_0.532092135025271-4 chr18 3506948 3507764 + 0.532092135025271 NA promoter-TSS (NM_026505) promoter-TSS (NM_026505) -601 NM_026505 68010 Mm.284863 NM_026505 ENSMUSG00000024232 Bambi 2610003H06Rik BMP and activin membrane-bound inhibitor protein-coding common_peak1_14_86_-0.26089937443738_6.31249380863004_0.532092135025271-6 chr8 14888487 14888809 + 0.532092135025271 NA 5' UTR (NM_012000, exon 1 of 3) 5' UTR (NM_012000, exon 1 of 3) 112 NM_012000 26889 Mm.254027 NM_012000 ENSMUSG00000026317 Cln8 mnd ceroid-lipofuscinosis, neuronal 8 protein-coding common_peak1_14_86_-0.26089937443738_6.31249380863004_0.532092135025271-2 chr12 85992406 85992745 + 0.532092135025271 NA intron (NM_001081423, intron 29 of 33) intron (NM_001081423, intron 29 of 33) 86466 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak1_14_86_-0.26089937443738_6.31249380863004_0.532092135025271-4 chr5 36573239 36573596 + 0.532092135025271 NA intron (NM_001113362, intron 2 of 14) intron (NM_001113362, intron 2 of 14) 8980 NM_133910 100855 Mm.486203 NM_133910 ENSMUSG00000029192 Tbc1d14 2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322 TBC1 domain family, member 14 protein-coding unique_peak2_14_86_-0.26089937443738_6.31249380863004_0.532092135025271-3 chr13 120013713 120014291 + 0.532092135025271 NA Intergenic Intergenic 38202 NM_001302966 100861753 Mm.165042 NM_001302966 ENSMUSG00000095609 Gm21188 - predicted gene, 21188 protein-coding common_peak1_14_86_-0.26089937443738_6.31249380863004_0.532092135025271-3 chr2 32981664 32982130 + 0.532092135025271 NA intron (NM_019488, intron 1 of 9) CpG-8008 159 NM_019488 56017 Mm.305754 NM_019488 ENSMUSG00000026791 Slc2a8 D2Ertd44e|GLUT8|GlutX1 solute carrier family 2, (facilitated glucose transporter), member 8 protein-coding unique_peak2_14_86_-0.26089937443738_6.31249380863004_0.532092135025271 chr1 184851729 184852359 + 0.532092135025271 NA Intergenic Intergenic -6197 NM_133684 67247 Mm.177724 NM_133684 ENSMUSG00000073481 Marc2 2810484M10Rik|Mosc2|mARC1 mitochondrial amidoxime reducing component 2 protein-coding unique_peak2_14_86_-0.26089937443738_6.31249380863004_0.532092135025271-2 chr10 127062565 127063310 + 0.532092135025271 NA promoter-TSS (NM_009870) promoter-TSS (NM_009870) -666 NM_009870 12567 Mm.6839 NM_009870 ENSMUSG00000006728 Cdk4 Crk3 cyclin-dependent kinase 4 protein-coding common_peak2_106_850_-0.0740449023301899_9.69599287052087_0.53208470632483 chr3 21986668 21989190 + 0.53208470632483 NA Intergenic Intergenic -88723 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_102_732_0.0738784956429281_9.55460863595528_0.532064939765391 chr19 42090343 42091372 + 0.532064939765391 NA exon (NM_145501, exon 1 of 9) exon (NM_145501, exon 1 of 9) 422 NM_145501 84095 Mm.117037 NM_145501 ENSMUSG00000025178 Pi4k2a Pi4k2 phosphatidylinositol 4-kinase type 2 alpha protein-coding common_peak1_137_1154_-0.064469504870269_10.1414423838683_0.53184514279351 chr17 84880381 84882050 + 0.53184514279351 NA Intergenic LTR33|LTR|ERVL -75526 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak2_90_626_0.0800234099180077_9.33233333776104_0.53168586009323 chr10 80260505 80262334 + 0.53168586009323 NA promoter-TSS (NM_010255) promoter-TSS (NM_010255) -451 NM_010255 14431 Mm.7329 NM_010255 ENSMUSG00000020150 Gamt AA571402|Spintz1 guanidinoacetate methyltransferase protein-coding common_peak1_90_626_0.0800234099180077_9.33233333776104_0.53168586009323 chr5 92137730 92138669 + 0.53168586009323 NA intron (NM_019490, intron 1 of 23) CpG 261 NM_019490 56041 Mm.15868 NM_019490 ENSMUSG00000029407 Uso1 115kDa|TAP|Vdp USO1 vesicle docking factor protein-coding common_peak2_214_1840_0.0475588457823655_10.8700533342411_0.531299324408918 chr7 35554390 35556622 + 0.531299324408918 NA exon (NM_033080, exon 1 of 3) exon (NM_033080, exon 1 of 3) 422 NM_033080 110959 Mm.410206 NM_033080 ENSMUSG00000034875 Nudt19 D7Rp2|D7Rp2-r|D7Rp2-s|D7Rp2e|RP2-r|RP2-s nudix (nucleoside diphosphate linked moiety X)-type motif 19 protein-coding common_peak1_142_1204_-0.0626270845348973_10.2035038888499_0.531271213246938 chr7 66104788 66106207 + 0.531271213246938 NA Intergenic Intergenic -4018 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_98_775_-0.0784583783729627_9.56068365300064_0.531146704863571 chr4 93334315 93336128 + 0.531146704863571 NA exon (NM_026954, exon 1 of 1) exon (NM_026954, exon 1 of 1) 290 NM_026954 69136 Mm.171558 NM_026954 ENSMUSG00000054000 Tusc1 2200001D17Rik|TSG-9 tumor suppressor candidate 1 protein-coding common_peak1_98_775_-0.0784583783729627_9.56068365300064_0.531146704863571 chr11 100702651 100704404 + 0.531146704863571 NA exon (NM_030150, exon 3 of 13) exon (NM_030150, exon 3 of 13) 744 NM_030150 80861 Mm.271830 NM_030150 ENSMUSG00000017830 Dhx58 B430001I08Rik|D11Lgp2e|LPG2|Lgp2|RLR-3 DEXH (Asp-Glu-X-His) box polypeptide 58 protein-coding common_peak1_147_1254_-0.0604633752540096_10.2632399612111_0.530920324691224 chr8 106007402 106008705 + 0.530920324691224 NA Intergenic B2_Mm1t|SINE|B2 -3425 NM_025518 66369 Mm.287500 NM_025518 ENSMUSG00000031901 Dus2 2310016K04Rik|Dus2l dihydrouridine synthase 2 protein-coding common_peak1_23_113_0.180885453927353_6.92333274112842_0.530907121312627-3 chr7 114081639 114082239 + 0.530907121312627 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 35842 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak2_23_113_0.180885453927353_6.92333274112842_0.530907121312627-2 chr5 43824149 43825180 + 0.530907121312627 NA intron (NM_009763, intron 4 of 8) intron (NM_009763, intron 4 of 8) 5771 NM_009763 12182 Mm.246332 NM_009763 ENSMUSG00000029082 Bst1 114/A10|A530073F09|BP-3|Bp3|Bsta1|CD157|Ly65 bone marrow stromal cell antigen 1 protein-coding common_peak1_23_113_0.180885453927353_6.92333274112842_0.530907121312627-2 chr2 163702567 163703068 + 0.530907121312627 NA intron (NM_011106, intron 1 of 3) intron (NM_011106, intron 1 of 3) 8780 NM_011106 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding unique_peak2_23_113_0.180885453927353_6.92333274112842_0.530907121312627 chr2 130539822 130540858 + 0.530907121312627 NA intron (NM_008980, intron 12 of 21) intron (NM_008980, intron 12 of 21) 23409 NR_040348 321014 Mm.442588 NR_040348 ENSMUSG00000060029 4930473A02Rik - RIKEN cDNA 4930473A02 gene ncRNA common_peak1_23_113_0.180885453927353_6.92333274112842_0.530907121312627 chr10 10307399 10307967 + 0.530907121312627 NA Intergenic L1M2a|LINE|L1 164631 NM_001127353 215772 Mm.246573 NM_172547 ENSMUSG00000050994 Adgb 9130014G24Rik androglobin protein-coding common_peak1_272_2624_-0.0416221485675159_11.3372906331571_0.530859689160217 chr11 55030955 55033740 + 0.530859689160217 NA intron (NM_013472, intron 1 of 25) intron (NM_013472, intron 1 of 25) 1124 NM_001110211 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak1_133_1113_-0.064377506003952_10.0893447643381_0.530758072232155 chr18 49832042 49833486 + 0.530758072232155 NA promoter-TSS (NM_001081371) promoter-TSS (NM_001081371) -233 NM_001081371 240283 Mm.257790 NM_001081371 ENSMUSG00000037416 Dmxl1 C630007L23Rik|D030030C22 Dmx-like 1 protein-coding common_peak2_111_813_0.07090438812439_9.70433717832844_0.530699192480266 chr10 99459544 99462118 + 0.530699192480266 NA Intergenic Intergenic -148340 NR_038019 100504202 Mm.403801 NR_038019 Gm20110 - predicted gene, 20110 ncRNA common_peak1_143_1115_0.0604009836025483_10.1543218036305_0.529819246505177 chr12 105012633 105014359 + 0.529819246505177 NA Intergenic Intergenic -3687 NM_172500 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak2_51_308_0.110570527922913_8.32674829186583_0.529739788935449 chr8 13213028 13214590 + 0.529739788935449 NA Intergenic Intergenic -13185 NM_025768 66790 Mm.34901 NM_025768 ENSMUSG00000038515 Grtp1 5430401C05Rik|C81211|Tbc1d6 GH regulated TBC protein 1 protein-coding common_peak1_51_308_0.110570527922913_8.32674829186583_0.529739788935449 chr5 149635781 149636885 + 0.529739788935449 NA promoter-TSS (NM_013559) promoter-TSS (NM_013559) -18 NM_013559 15505 Mm.270681 NM_013559 ENSMUSG00000029657 Hsph1 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105 heat shock 105kDa/110kDa protein 1 protein-coding common_peak1_36_199_0.135927461436686_7.71181992049307_0.529674542411332 chr8 126970523 126971122 + 0.529674542411332 NA exon (NM_172762, exon 2 of 11) exon (NM_172762, exon 2 of 11) 257 NM_172762 52202 Mm.28199 NM_172762 ENSMUSG00000033931 Rbm34 4930547K05Rik|6330444B11|D8Ertd233e RNA binding motif protein 34 protein-coding common_peak2_36_199_0.135927461436686_7.71181992049307_0.529674542411332 chr13 64369873 64371043 + 0.529674542411332 NA promoter-TSS (NM_009984) promoter-TSS (NM_009984) 62 NM_009984 13039 Mm.930 NM_009984 ENSMUSG00000021477 Ctsl 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt cathepsin L protein-coding common_peak1_61_385_0.100837478652583_8.64287577659437_0.529641944130768 chr7 141193267 141193984 + 0.529641944130768 NA promoter-TSS (NM_001172065) promoter-TSS (NM_001172065) 379 NM_001130444 15461 Mm.334313 NM_008284 ENSMUSG00000025499 Hras H-ras|Ha-ras|Harvey-ras|Hras-1|Hras1|Kras2|c-H-ras|c-Ha-ras|c-rasHa|ras Harvey rat sarcoma virus oncogene protein-coding common_peak1_188_1683_-0.0519327469613291_10.6917100495857_0.52961471011878 chr4 140948382 140950965 + 0.52961471011878 NA intron (NM_008812, intron 15 of 15) intron (NM_008812, intron 15 of 15) 8229 NR_045911 100126227 Mm.404073 NR_045911 ENSMUSG00000087698 Gm13031 OTTMUSG00000010081 predicted gene 13031 ncRNA unique_peak2_28_145_0.158838755632551_7.26924393669629_0.5295878199499-2 chrX 102188559 102189356 + 0.5295878199499 NA intron (NM_009094, intron 1 of 6) intron (NM_009094, intron 1 of 6) 434 NM_009094 20102 Mm.66 NM_009094 ENSMUSG00000031320 Rps4x Rps4|Rps4-1 ribosomal protein S4, X-linked protein-coding unique_peak2_28_145_0.158838755632551_7.26924393669629_0.5295878199499 chr15 76715296 76716104 + 0.5295878199499 NA TTS (NM_145471) TTS (NM_145471) 4960 NM_145471 223664 Mm.277582 NM_145471 ENSMUSG00000033728 Lrrc14 E130306I01Rik|mKIAA0014 leucine rich repeat containing 14 protein-coding common_peak1_28_145_0.158838755632551_7.26924393669629_0.5295878199499 chr4 132922815 132923360 + 0.5295878199499 NA promoter-TSS (NM_001163792) promoter-TSS (NM_001163792) -536 NM_001163792 230789 Mm.11473 NM_145553 ENSMUSG00000028878 Fam76a - family with sequence similarity 76, member A protein-coding common_peak1_120_985_-0.0688769917424636_9.91100534050668_0.529478421992573 chr7 75848331 75849477 + 0.529478421992573 NA intron (NM_182782, intron 1 of 1) intron (NM_182782, intron 1 of 1) 566 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_23_146_-0.18589687674427_7.10672390646423_0.529377573067446-2 chr17 28216359 28216995 + 0.529377573067446 NA intron (NM_027185, intron 1 of 10) intron (NM_027185, intron 1 of 10) 8899 NM_027185 23853 Mm.204731 NM_027185 ENSMUSG00000002257 Def6 2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6 differentially expressed in FDCP 6 protein-coding common_peak1_23_146_-0.18589687674427_7.10672390646423_0.529377573067446 chr10 80668828 80669453 + 0.529377573067446 NA intron (NM_021462, intron 9 of 13) intron (NM_021462, intron 9 of 13) 7153 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak1_143_1214_-0.0622183030614085_10.2156314469624_0.529334499195471 chr7 19271045 19272835 + 0.529334499195471 NA promoter-TSS (NM_009499) promoter-TSS (NM_009499) -86 NM_001282022 22323 Mm.9684 NM_009499 ENSMUSG00000030403 Vasp - vasodilator-stimulated phosphoprotein protein-coding common_peak2_116_859_0.0688851161716855_9.7826354076753_0.529051095429381 chr3 52197499 52200308 + 0.529051095429381 NA Intergenic Intergenic -69434 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_158_1262_0.0572373578088445_10.331257602692_0.528982644436688 chr1 54881928 54883887 + 0.528982644436688 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 43480 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_344_3484_-0.0362420336306712_11.7488219239404_0.528972563636387 chr15 99392049 99394638 + 0.528972563636387 NA 5' UTR (NM_001171035, exon 1 of 10) 5' UTR (NM_001171035, exon 1 of 10) 124 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak2_51_361_-0.117812331255918_8.44093972145525_0.528857595006845 chr17 17178789 17179908 + 0.528857595006845 NA Intergenic Intergenic 57965 NM_011765 22759 Mm.436633 NM_011765 ENSMUSG00000095990 Zfp97 NGD16-4 zinc finger protein 97 protein-coding common_peak2_61_444_-0.104367009933098_8.74547802088721_0.528853256113755 chr9 58252619 58254000 + 0.528853256113755 NA non-coding (NR_028146, exon 1 of 8) non-coding (NR_028146, exon 1 of 8) 145 NM_026942 69106 Mm.216502 NM_026942 ENSMUSG00000032333 Stoml1 1810015E19Rik|AI847431|SLP1|STORP|UNC24|WPB72 stomatin-like 1 protein-coding common_peak1_250_2371_-0.0440908137320051_11.18984288768_0.528782841126455 chr3 105799213 105801932 + 0.528782841126455 NA intron (NM_145541, intron 1 of 7) intron (NM_145541, intron 1 of 7) 809 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein-1a protein-coding common_peak1_103_822_-0.0761027534079819_9.64669724371764_0.528768187424455 chr7 101347432 101348775 + 0.528768187424455 NA promoter-TSS (NM_001040111) promoter-TSS (NM_001040111) 34 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding unique_peak2_36_242_-0.145028852394371_7.8522980774086_0.52860363364312 chr15 34049431 34050997 + 0.52860363364312 NA Intergenic Intergenic -32505 NM_026002 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding common_peak1_36_242_-0.145028852394371_7.8522980774086_0.52860363364312 chr15 80263687 80264288 + 0.52860363364312 NA exon (NM_175109, exon 2 of 4) exon (NM_175109, exon 2 of 4) 319 NM_175109 66538 Mm.39485 NM_175109 ENSMUSG00000051518 Rps19bp1 2510038A11Rik|AI604923|S19BP ribosomal protein S19 binding protein 1 protein-coding common_peak1_36_242_-0.145028852394371_7.8522980774086_0.52860363364312-2 chrX 42401530 42402298 + 0.52860363364312 NA Intergenic Intergenic -100651 NM_011364 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak1_42_241_0.126863932979356_7.98229520376427_0.528575810229025 chr11 120378071 120378832 + 0.528575810229025 NA intron (NM_027980, intron 1 of 9) CpG-2938 295 NM_027980 71885 Mm.274890 NM_027980 ENSMUSG00000025384 Faap100 2310003H01Rik Fanconi anemia core complex associated protein 100 protein-coding common_peak2_45_263_0.120678995921411_8.10473361731916_0.528514604481911 chr5 3419948 3421342 + 0.528514604481911 NA intron (NM_009873, intron 3 of 7) intron (NM_009873, intron 3 of 7) 76752 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak1_99_784_-0.0773090292698946_9.57789432914404_0.528435282742739 chr10 45577655 45578664 + 0.528435282742739 NA intron (NM_172473, intron 1 of 23) CpG 330 NM_172473 209462 Mm.458633 NM_172473 ENSMUSG00000038822 Hace1 1700042J16Rik|A730034A22Rik|BC025474 HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 protein-coding unique_peak2_28_182_-0.167036523771475_7.43218157639831_0.528362830586505 chr19 53317856 53319165 + 0.528362830586505 NA intron (NM_001008542, intron 1 of 5) MIR3|SINE|MIR 8004 NM_001008542 17859 Mm.2154 NM_010847 ENSMUSG00000025025 Mxi1 ENSMUSG00000067085|Gm10197|Mad2|bHLHc11 MAX interactor 1, dimerization protein protein-coding common_peak1_87_673_-0.0835824161151955_9.35481357312426_0.52816076000319 chr2 79086746 79088058 + 0.52816076000319 NA Intergenic Intergenic -168024 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_87_673_-0.0835824161151955_9.35481357312426_0.52816076000319-2 chr9 53536910 53537781 + 0.52816076000319 NA promoter-TSS (NM_007499) promoter-TSS (NM_007499) 298 NM_001081152 244879 Mm.116713 NM_001081152 ENSMUSG00000033054 Npat 6820401K01|AI427561|BB112559 nuclear protein in the AT region protein-coding common_peak1_72_474_0.0905353231673178_8.93705136480197_0.52796704217514 chr19 24279806 24280813 + 0.52796704217514 NA intron (NM_008044, intron 1 of 4) CpG 277 NM_008044 14297 Mm.7319 NM_008044 ENSMUSG00000059363 Fxn FA|FARR|Frda|X25 frataxin protein-coding common_peak1_319_3180_-0.0376811841633149_11.6164240644579_0.527935962465702 chr19 8712135 8714457 + 0.527935962465702 NA intron (NM_008577, intron 1 of 8) intron (NM_008577, intron 1 of 8) 601 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak2_42_288_-0.129198512246727_8.11032642637731_0.527689863957745 chr8 117801170 117802576 + 0.527689863957745 NA promoter-TSS (NM_026758) promoter-TSS (NM_026758) 56 NM_026758 68533 Mm.181836 NM_026758 ENSMUSG00000031843 Mphosph6 1110001M01Rik|AA536809|C86426 M phase phosphoprotein 6 protein-coding common_peak1_42_288_-0.129198512246727_8.11032642637731_0.527689863957745-2 chr9 103201585 103202225 + 0.527689863957745 NA intron (NM_009275, intron 1 of 6) CpG 160 NM_009275 20818 Mm.273053 NM_009275 ENSMUSG00000032553 Srprb AA409543 signal recognition particle receptor, B subunit protein-coding common_peak1_42_288_-0.129198512246727_8.11032642637731_0.527689863957745 chr19 53198287 53199320 + 0.527689863957745 NA intron (NM_013758, intron 1 of 15) intron (NM_013758, intron 1 of 15) 54806 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak1_39_265_-0.137535896684057_7.98651448715916_0.527677575819538 chr6 54953462 54954278 + 0.527677575819538 NA intron (NM_172729, intron 1 of 11) RLTR13G|LTR|ERVK 17791 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak2_65_417_0.0965731267663532_8.75564569546406_0.52727051161282 chr3 138442357 138443730 + 0.52727051161282 NA promoter-TSS (NM_007410) promoter-TSS (NM_007410) -50 NM_007410 11532 Mm.3874 NM_007410 ENSMUSG00000028138 Adh5 Adh-5|Adh3|GSNOR alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding common_peak1_149_1274_-0.0595195122701959_10.2865217756111_0.52723714383456 chr3 103808584 103810085 + 0.52723714383456 NA promoter-TSS (NM_001163553) promoter-TSS (NM_001163553) 53 NM_133865 140917 Mm.374850 NM_133865 ENSMUSG00000027845 Dclre1b AI452214|Apollo|SNMIB|mSNM1B DNA cross-link repair 1B protein-coding common_peak2_159_1272_0.0569544572884872_10.3424939325456_0.52722622485112 chr11 118347174 118350264 + 0.52722622485112 NA intron (NM_011594, intron 1 of 4) intron (NM_011594, intron 1 of 4) -6185 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 BC100451 Cep295nl|Ddc8|FS39|Kiaa1731nl cDNA sequence BC100451 protein-coding common_peak1_65_478_-0.0999495868889433_8.85390705229171_0.526670621810162 chr7 45521323 45522464 + 0.526670621810162 NA exon (NM_001290999, exon 9 of 10) exon (NM_001290999, exon 9 of 10) 4375 NM_008654 17872 Mm.4048 NM_008654 ENSMUSG00000040435 Ppp1r15a 9630030H21|Gadd34|Myd116 protein phosphatase 1, regulatory (inhibitor) subunit 15A protein-coding common_peak1_104_750_0.0729111331625472_9.58912466409555_0.5266628932658 chr14 30548577 30549964 + 0.5266628932658 NA 5' UTR (NM_009388, exon 1 of 14) 5' UTR (NM_009388, exon 1 of 14) 139 NM_009388 21881 Mm.290692 NM_009388 ENSMUSG00000021957 Tkt p68 transketolase protein-coding common_peak1_347_3520_-0.0357470588245672_11.7638959824508_0.526612723762964 chr14 56295749 56299118 + 0.526612723762964 NA Intergenic MLTR14|LTR|ERV1 -35173 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak2_289_2672_0.0391370903341652_11.4038126674102_0.526439153888118 chr8 95805754 95808784 + 0.526439153888118 NA non-coding (NR_015574, exon 1 of 4) non-coding (NR_015574, exon 1 of 4) 193 NM_178078 234594 Mm.259220 NM_153164 ENSMUSG00000036550 Cnot1 6030411K04Rik|AA815922|D830048B13 CCR4-NOT transcription complex, subunit 1 protein-coding common_peak2_212_1944_-0.0482603778732535_10.9014242509369_0.526362380251875 chr13 65240287 65242247 + 0.526362380251875 NA Intergenic CpG -35551 NM_175290 97895 Mm.315815 NM_175290 ENSMUSG00000032999 Nlrp4f C330026N02Rik|C86045|Nalp-kappa|Nalp4f NLR family, pyrin domain containing 4F protein-coding common_peak1_21_101_0.187372400722456_6.76611154233272_0.526362311986403 chr17 26595015 26595563 + 0.526362311986403 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 33777 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_21_101_0.187372400722456_6.76611154233272_0.526362311986403-2 chr3 95136093 95136494 + 0.526362311986403 NA intron (NM_153121, intron 1 of 2) PB1D10|SINE|Alu 2205 NM_153121 217779 Mm.341945 NM_153121 ENSMUSG00000053769 Lysmd1 2610022K04Rik|AI415311 LysM, putative peptidoglycan-binding, domain containing 1 protein-coding common_peak2_21_101_0.187372400722456_6.76611154233272_0.526362311986403 chr9 118073585 118074252 + 0.526362311986403 NA intron (NM_026442, intron 3 of 3) Lx5c|LINE|L1 33396 NM_013727 27215 Mm.92705 NM_013727 ENSMUSG00000039285 Azi2 AA410145|AZ2 5-azacytidine induced gene 2 protein-coding common_peak2_55_338_0.108035598067937_8.45915926217031_0.526263678967125 chr2 30285664 30287048 + 0.526263678967125 NA promoter-TSS (NM_177648) promoter-TSS (NM_177648) -2 NM_177648 227697 Mm.26690 NM_177648 ENSMUSG00000075419 Dolk BC026973|Tmem15|mKIAA1094 dolichol kinase protein-coding common_peak2_185_1651_-0.0525689393455_10.6637135017467_0.526221808792825 chr5 145230862 145232625 + 0.526221808792825 NA promoter-TSS (NM_001083958) promoter-TSS (NM_001083958) -16 NM_028298 72611 Mm.206555 NM_028298 ENSMUSG00000007812 Zfp655 2700038I16Rik|9030409O18Rik|mKIAA4222 zinc finger protein 655 protein-coding unique_peak2_31_165_0.1478261429646_7.44895250282922_0.525754702688879 chr1 82282721 82283911 + 0.525754702688879 NA intron (NM_010570, intron 1 of 1) CpG 8123 NM_010570 16367 Mm.4952 NM_010570 ENSMUSG00000055980 Irs1 G972R|IRS-1 insulin receptor substrate 1 protein-coding common_peak1_69_449_0.0942768344928524_8.86091960846346_0.525698718183452 chr10 61270381 61271532 + 0.525698718183452 NA exon (NM_001081127, exon 2 of 22) exon (NM_001081127, exon 2 of 22) 2482 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak1_69_449_0.0942768344928524_8.86091960846346_0.525698718183452-2 chr16 24624099 24625460 + 0.525698718183452 NA intron (NM_001145952, intron 4 of 11) intron (NM_001145952, intron 4 of 11) 95465 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_55_393_-0.108874758252094_8.56761444033033_0.525676664020932 chr3 79248985 79249755 + 0.525676664020932 NA intron (NR_045502, intron 2 of 2) intron (NR_045502, intron 2 of 2) 36451 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak1_224_1948_0.045765849185063_10.9514012998504_0.525644597363874 chr11 97727065 97729716 + 0.525644597363874 NA intron (NM_054051, intron 3 of 9) intron (NM_054051, intron 3 of 9) 16314 NM_054051 108083 Mm.39700 NM_054051 ENSMUSG00000018547 Pip4k2b AI848124|PI5P4Kbeta|Pip5k2b|c11 phosphatidylinositol-5-phosphate 4-kinase, type II, beta protein-coding common_peak1_131_1000_0.0633183111975981_9.99888541443479_0.525625440277564 chr18 62547754 62548827 + 0.525625440277564 NA promoter-TSS (NM_177829) promoter-TSS (NM_177829) 453 NM_134136 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding common_peak1_145_1234_-0.0613639889000535_10.239613332022_0.525557206781354 chr2 152331508 152332976 + 0.525557206781354 NA 5' UTR (NM_001083921, exon 1 of 12) 5' UTR (NM_001083921, exon 1 of 12) 183 NM_001083921 24105 Mm.182145 NM_019705 ENSMUSG00000027466 Rbck1 AL033326|HOIL-1|HOIL-1L|UIP28|Ubce7ip3 RanBP-type and C3HC4-type zinc finger containing 1 protein-coding common_peak1_84_575_0.0817168464101794_9.2107834246474_0.525539750432165 chr18 7692762 7693890 + 0.525539750432165 NA Intergenic CpG -66463 NM_001161620 75739 Mm.133293 NM_001081287 ENSMUSG00000057440 Mpp7 1110068J02Rik|2810038M04Rik|5430426E14Rik|AI415104|Gm955 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) protein-coding common_peak2_84_575_0.0817168464101794_9.2107834246474_0.525539750432165 chr17 78361432 78363266 + 0.525539750432165 NA intron (NM_015800, intron 13 of 16) intron (NM_015800, intron 13 of 16) 55803 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_80_610_-0.0886864868258517_9.21068532640581_0.525539750431967 chr17 45734620 45735377 + 0.525539750431967 NA Intergenic Intergenic -1154 NM_028164 72240 Mm.482897 NM_028164 ENSMUSG00000094690 1600014C23Rik - RIKEN cDNA 1600014C23 gene protein-coding common_peak1_92_644_0.0776613705769744_9.3719860355991_0.525417331269432 chr7 27978648 27979532 + 0.525417331269432 NA promoter-TSS (NM_001081021) promoter-TSS (NM_001081021) 67 NM_001081021 338354 Mm.389873 NM_001081021 ENSMUSG00000063047 Zfp780b B230208L21Rik zinc finger protein 780B protein-coding common_peak1_21_132_-0.195484692807239_6.95754008909757_0.525337744924321-3 chr5 142927295 142927817 + 0.525337744924321 NA Intergenic Intergenic -20802 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_21_132_-0.195484692807239_6.95754008909757_0.525337744924321 chr18 75343089 75343518 + 0.525337744924321 NA Intergenic CpG -24062 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak1_21_132_-0.195484692807239_6.95754008909757_0.525337744924321-2 chr4 116597763 116598232 + 0.525337744924321 NA promoter-TSS (NR_029450) promoter-TSS (NR_029450) -367 NR_029450 654318 Mm.255685 NR_029450 ENSMUSG00000085408 C530005A16Rik D930044c15rik RIKEN cDNA C530005A16 gene ncRNA common_peak2_21_132_-0.195484692807239_6.95754008909757_0.525337744924321 chr6 50109359 50110148 + 0.525337744924321 NA promoter-TSS (NM_019939) promoter-TSS (NM_019939) -488 NM_019939 56524 Mm.41288 NM_008016 ENSMUSG00000038388 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) protein-coding common_peak2_69_512_-0.0947569898971636_8.95543652065847_0.525220877295498 chr17 17004525 17005823 + 0.525220877295498 NA Intergenic Intergenic -58929 NM_001005358 449000 Mm.483718 NM_001005358 ENSMUSG00000096696 Zfp960 - zinc finger protein 960 protein-coding common_peak2_69_512_-0.0947569898971636_8.95543652065847_0.525220877295498-2 chr17 22865944 22867445 + 0.525220877295498 NA intron (NM_001110254, intron 1 of 4) intron (NM_001110254, intron 1 of 4) 440 NM_177358 240041 Mm.328828 NM_177358 ENSMUSG00000059142 Zfp945 A630033E08Rik|C730040L01Rik zinc finger protein 945 protein-coding common_peak2_160_1387_-0.0567949392192819_10.4103943829686_0.525214183709366 chr3 79247065 79250048 + 0.525214183709366 NA non-coding (NR_045502, exon 2 of 3) non-coding (NR_045502, exon 2 of 3) 35637 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak1_62_393_0.0995573404954069_8.67183048970408_0.525151942096832 chr16 17922012 17922579 + 0.525151942096832 NA Intergenic Intergenic 5924 NM_153150 13358 Mm.229291 NM_153150 ENSMUSG00000003528 Slc25a1 1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 protein-coding common_peak1_88_682_-0.0827233995259018_9.37438006852714_0.525079056127892 chr17 29268393 29269583 + 0.525079056127892 NA 5' UTR (NM_030561, exon 1 of 9) 5' UTR (NM_030561, exon 1 of 9) 200 NM_030561 80748 Mm.290116 NM_030561 ENSMUSG00000052712 BC004004 2400006G15Rik cDNA sequence BC004004 protein-coding common_peak2_236_2078_0.0445595644082317_11.0439538250625_0.525078292758937 chr17 35163300 35166467 + 0.525078292758937 NA promoter-TSS (NM_001199044) promoter-TSS (NM_001199044) -6 NM_020027 53761 Mm.272462 NM_020027 ENSMUSG00000024393 Prrc2a 3110039B05Rik|Bat-2|Bat2|D17H6S51E|G2|Wbp12|mKIAA4178 proline-rich coiled-coil 2A protein-coding common_peak2_202_1834_-0.0493649239525364_10.8168818857543_0.525050900295079 chr6 50417065 50419861 + 0.525050900295079 NA intron (NM_001163645, intron 2 of 21) MLT1H1|LTR|ERVL-MaLR -35626 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_31_204_-0.156614525193922_7.60117283690849_0.524992371374274 chr10 117839746 117840471 + 0.524992371374274 NA intron (NM_024457, intron 1 of 7) intron (NM_024457, intron 1 of 7) 5866 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak1_31_204_-0.156614525193922_7.60117283690849_0.524992371374274-4 chr7 90475503 90476037 + 0.524992371374274 NA intron (NM_026734, intron 1 of 4) intron (NM_026734, intron 1 of 4) 225 NM_026734 68472 Mm.289791 NM_026734 ENSMUSG00000030614 Tmem126b 1110001A23Rik transmembrane protein 126B protein-coding common_peak1_31_204_-0.156614525193922_7.60117283690849_0.524992371374274-3 chr16 4541464 4542170 + 0.524992371374274 NA Intergenic CpG 17903 NM_031182 83383 Mm.273210 NM_031182 ENSMUSG00000005718 Tfap4 AI642933|AP-4|D930048N17Rik|Tcfap4|bHLHc41 transcription factor AP4 protein-coding common_peak1_31_204_-0.156614525193922_7.60117283690849_0.524992371374274-2 chr11 100840906 100841530 + 0.524992371374274 NA intron (NM_001113563, intron 1 of 18) intron (NM_001113563, intron 1 of 18) 9367 NM_001113563 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding unique_peak2_52_315_0.11196101726601_8.35976125681011_0.524856200968646 chr1 85611023 85612562 + 0.524856200968646 NA intron (NM_001013817, intron 3 of 16) intron (NM_001013817, intron 3 of 16) -7901 NM_175397 109032 Mm.335802 NM_030194 ENSMUSG00000070034 Sp110 5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1 Sp110 nuclear body protein protein-coding common_peak2_52_315_0.11196101726601_8.35976125681011_0.524856200968646 chr1 74816429 74817591 + 0.524856200968646 NA Intergenic CpG 24991 NM_009518 22409 Mm.5130 NM_009518 ENSMUSG00000026167 Wnt10a - wingless-type MMTV integration site family, member 10A protein-coding common_peak2_52_315_0.11196101726601_8.35976125681011_0.524856200968646-2 chr12 79006426 79007762 + 0.524856200968646 NA 5' UTR (NM_178745, exon 1 of 3) 5' UTR (NM_178745, exon 1 of 3) 183 NM_178745 268567 Mm.341747 NM_178745 ENSMUSG00000046157 Tmem229b 6330442E10Rik|9830138K24|AU019070 transmembrane protein 229B protein-coding common_peak2_62_452_-0.101758080094452_8.77248819999901_0.524680924086656 chr13 91483443 91485175 + 0.524680924086656 NA intron (NM_024186, intron 1 of 15) B1_Mur2|SINE|Alu 23212 NM_024186 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding unique_peak2_26_132_0.166925131338405_7.13874500117039_0.524495796516229 chr1 80408580 80409340 + 0.524495796516229 NA Intergenic Intergenic -36972 NR_040460 72208 Mm.396181 NR_040460 ENSMUSG00000101483 1700016L21Rik Jr3 RIKEN cDNA 1700016L21 gene ncRNA common_peak1_26_132_0.166925131338405_7.13874500117039_0.524495796516229 chr11 86816296 86816839 + 0.524495796516229 NA intron (NR_106195, intron 2 of 8) B1_Mur2|SINE|Alu -8907 NM_026191 67487 Mm.260627 NM_026191 ENSMUSG00000018425 Dhx40 2410016C14Rik|ARG147|DDX40|PAD DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein-coding common_peak1_26_132_0.166925131338405_7.13874500117039_0.524495796516229-2 chr2 167313961 167314608 + 0.524495796516229 NA intron (NM_019835, intron 1 of 8) intron (NM_019835, intron 1 of 8) 34894 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding unique_peak2_26_132_0.166925131338405_7.13874500117039_0.524495796516229-2 chr17 86976110 86977231 + 0.524495796516229 NA intron (NM_145491, intron 2 of 4) intron (NM_145491, intron 2 of 4) 13559 NM_145491 104215 Mm.826 NM_145491 ENSMUSG00000024143 Rhoq Arhq|TC10A|Tc10 ras homolog family member Q protein-coding common_peak2_197_1780_-0.0504050261010978_10.7732692880511_0.524392384450157 chr2 127494407 127501320 + 0.524392384450157 NA intron (NM_019789, intron 2 of 8) intron (NM_019789, intron 2 of 8) -15364 NM_001111331 56461 Mm.315292 NM_019789 ENSMUSG00000079056 Kcnip3 4933407H12Rik|AI413860|Csen|DREAM|KChIP3|R74849 Kv channel interacting protein 3, calsenilin protein-coding common_peak1_527_5837_-0.0274893030959635_12.4975138439543_0.524113831993037 chr11 34769119 34774102 + 0.524113831993037 NA intron (NM_033374, intron 1 of 51) intron (NM_033374, intron 1 of 51) 12295 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding common_peak2_127_1053_-0.0655689549529779_10.0088746741607_0.52409880881926 chr7 125443875 125445671 + 0.52409880881926 NA 5' UTR (NM_029842, exon 1 of 8) 5' UTR (NM_029842, exon 1 of 8) 153 NM_029842 77035 Mm.307239 NM_029842 ENSMUSG00000030752 Kdm8 3110005O21Rik|Jmjd5 lysine (K)-specific demethylase 8 protein-coding common_peak1_127_1053_-0.0655689549529779_10.0088746741607_0.52409880881926 chr10 118084785 118086359 + 0.52409880881926 NA Intergenic Intergenic -56215 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak1_34_185_0.142286903415503_7.61030226281578_0.523842835269094-2 chr7 28812180 28812729 + 0.523842835269094 NA intron (NM_177301, intron 1 of 12) intron (NM_177301, intron 1 of 12) 1564 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak1_34_185_0.142286903415503_7.61030226281578_0.523842835269094 chr2 30093014 30093649 + 0.523842835269094 NA intron (NM_001037762, intron 1 of 4) intron (NM_001037762, intron 1 of 4) 304 NM_025428 66220 Mm.22538 NM_025428 ENSMUSG00000015335 Zdhhc12 1190004A01Rik zinc finger, DHHC domain containing 12 protein-coding common_peak1_214_1966_-0.047948485146259_10.9178069997054_0.523799571674969 chr3 88176889 88178682 + 0.523799571674969 NA promoter-TSS (NR_045997) promoter-TSS (NR_045997) 0 NR_045997 76642 Mm.424420 NR_045997 ENSMUSG00000096935 1700113A16Rik 2210408E11Rik|AA408983 RIKEN cDNA 1700113A16 gene ncRNA common_peak1_26_167_-0.170109855939166_7.30726249480918_0.523795193141657-2 chr4 141866773 141867378 + 0.523795193141657 NA intron (NM_025994, intron 1 of 3) intron (NM_025994, intron 1 of 3) 7845 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_26_167_-0.170109855939166_7.30726249480918_0.523795193141657 chr10 19009813 19010403 + 0.523795193141657 NA intron (NM_001166402, intron 1 of 7) intron (NM_001166402, intron 1 of 7) 1855 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak2_26_167_-0.170109855939166_7.30726249480918_0.523795193141657 chr3 84125667 84126870 + 0.523795193141657 NA intron (NM_029797, intron 4 of 7) intron (NM_029797, intron 4 of 7) 29518 NM_029797 76915 Mm.274829 NM_029797 ENSMUSG00000033752 Mnd1 2610034E18Rik|AI591601|Gaj meiotic nuclear divisions 1 protein-coding unique_peak2_26_167_-0.170109855939166_7.30726249480918_0.523795193141657 chr15 77811461 77812745 + 0.523795193141657 NA intron (NM_022410, intron 2 of 40) intron (NM_022410, intron 2 of 40) 30072 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_26_167_-0.170109855939166_7.30726249480918_0.523795193141657-3 chr7 102441750 102442293 + 0.523795193141657 NA 5' UTR (NM_009103, exon 1 of 19) 5' UTR (NM_009103, exon 1 of 19) 326 NM_009103 20133 Mm.197486 NM_009103 ENSMUSG00000030978 Rrm1 RnrM1 ribonucleotide reductase M1 protein-coding common_peak1_365_3568_0.033962092337589_11.8182852322178_0.523414231660042 chr11 106786810 106790035 + 0.523414231660042 NA promoter-TSS (NM_007840) promoter-TSS (NM_007840) 72 NM_007840 13207 Mm.491096 NM_007840 ENSMUSG00000020719 Ddx5 2600009A06Rik|G17P1|HUMP68|Hlr1|p68 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 protein-coding unique_peak2_34_226_-0.145102772767381_7.75399710090722_0.523303451307008 chr6 24526847 24528355 + 0.523303451307008 NA promoter-TSS (NM_026614) promoter-TSS (NM_026614) 84 NM_001311068 68202 Mm.275780 NM_026614 ENSMUSG00000023089 Ndufa5 2900002J19Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 protein-coding common_peak1_132_1103_-0.0646241441158075_10.0762123847203_0.523223672995138 chr11 79703414 79704743 + 0.523223672995138 NA Intergenic Intergenic -7891 NR_029579 387188 NR_029579 ENSMUSG00000065395 Mir193a Mir193|Mirn193|mir-193a|mmu-mir-193|mmu-mir-193a microRNA 193a ncRNA common_peak1_49_293_0.112955158486377_8.25614992407955_0.523214806959351 chr13 63239864 63240563 + 0.523214806959351 NA intron (NM_001289924, intron 12 of 16) CpG 184 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_49_293_0.112955158486377_8.25614992407955_0.523214806959351-3 chrX 19166538 19167391 + 0.523214806959351 NA Intergenic Intergenic -19993 NR_029807 723828 NR_029807 ENSMUSG00000065471 Mir222 Mirn222|mir-222|mmu-mir-222 microRNA 222 ncRNA common_peak2_49_293_0.112955158486377_8.25614992407955_0.523214806959351 chr19 53438025 53439441 + 0.523214806959351 NA Intergenic Intergenic 26063 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_49_293_0.112955158486377_8.25614992407955_0.523214806959351-2 chr6 124321311 124322262 + 0.523214806959351 NA intron (NM_001170395, intron 11 of 16) RLTR19-int|LTR|ERVK 17135 NM_053094 93671 Mm.37426 NM_053094 ENSMUSG00000008845 Cd163 CD163v2|CD163v3 CD163 antigen protein-coding common_peak1_101_802_-0.0749730892035014_9.61176963291556_0.523199734736885 chr3 79590869 79592100 + 0.523199734736885 NA promoter-TSS (NM_026352) promoter-TSS (NM_026352) 95 NM_026352 67738 Mm.295252 NM_026352 ENSMUSG00000027804 Ppid 4930564J03Rik|CYP-40|Ppidl|Ppif peptidylprolyl isomerase D (cyclophilin D) protein-coding common_peak2_77_516_0.0855352904792834_9.05678811555457_0.523106240430032 chr15 97350267 97352806 + 0.523106240430032 NA intron (NM_172293, intron 3 of 5) intron (NM_172293, intron 3 of 5) -104249 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_77_516_0.0855352904792834_9.05678811555457_0.523106240430032 chr4 150854975 150855774 + 0.523106240430032 NA promoter-TSS (NR_040649) promoter-TSS (NR_040649) 283 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak1_198_1791_-0.050373128210186_10.7821683579525_0.522997026835935 chr11 116434045 116436176 + 0.522997026835935 NA intron (NR_003376, intron 3 of 3) (CA)n|Simple_repeat|Simple_repeat 897 NR_003376 664849 Mm.258466 NR_003376 Gm7367 EG664849 1110014K08Rik pseudogene pseudo common_peak1_182_1618_-0.0522333031023106_10.6347706187514_0.522970603808423 chr9 96630445 96632004 + 0.522970603808423 NA intron (NM_053268, intron 1 of 23) CpG 279 NM_053268 114713 Mm.124502 NM_053268 ENSMUSG00000032413 Rasa2 5430433H21Rik|AA517451|AU023900|GAP1m RAS p21 protein activator 2 protein-coding common_peak1_19_89_0.199281131301102_6.59149366198023_0.522897988096819-2 chr11 87461019 87461405 + 0.522897988096819 NA intron (NM_031386, intron 2 of 30) B3A|SINE|B2 33621 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak1_19_89_0.199281131301102_6.59149366198023_0.522897988096819-3 chr15 60172315 60172763 + 0.522897988096819 NA Intergenic L1_Mus3|LINE|L1 -155921 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_19_89_0.199281131301102_6.59149366198023_0.522897988096819-4 chr6 3425285 3425807 + 0.522897988096819 NA Intergenic Intergenic -25975 NM_010156 209086 Mm.196013 NM_010156 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like protein-coding unique_peak2_19_89_0.199281131301102_6.59149366198023_0.522897988096819 chr10 80086179 80087089 + 0.522897988096819 NA intron (NM_183426, intron 1 of 31) intron (NM_183426, intron 1 of 31) 16068 NM_183426 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch homolog 2 (Drosophila) protein-coding common_peak1_19_89_0.199281131301102_6.59149366198023_0.522897988096819 chr11 77512831 77513312 + 0.522897988096819 NA intron (NM_001024920, intron 1 of 6) CpG-2275 202 NM_001024920 216964 Mm.341211 NM_001024920 ENSMUSG00000044328 Trp53i13 2410019G02Rik|Tp53i13 transformation related protein 53 inducible protein 13 protein-coding common_peak2_19_89_0.199281131301102_6.59149366198023_0.522897988096819 chr7 98534563 98535197 + 0.522897988096819 NA Intergenic Intergenic 40658 NM_001113379 434215 Mm.323057 NM_001113379 ENSMUSG00000090958 Lrrc32 AI426318|D11S833Eh|D7H11S833E|EG434215|Garp leucine rich repeat containing 32 protein-coding common_peak2_66_486_-0.0972342619326181_8.87916083111603_0.522832610882441 chr5 21417668 21420150 + 0.522832610882441 NA intron (NM_029195, intron 1 of 18) intron (NM_029195, intron 1 of 18) 5768 NM_029195 75172 Mm.426695 NM_029195 ENSMUSG00000064280 Ccdc146 4930528G09Rik|mKIAA1505 coiled-coil domain containing 146 protein-coding common_peak2_59_370_0.0999933671632576_8.58527206020243_0.522750271515894 chr15 102670230 102671246 + 0.522750271515894 NA intron (NM_026468, intron 1 of 4) intron (NM_026468, intron 1 of 4) 309 NM_026468 67942 Mm.10314 NM_026468 ENSMUSG00000062683 Atp5g2 1810041M08Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) protein-coding common_peak1_85_654_-0.0830116149845068_9.31384528893256_0.522303899840654 chr12 28649009 28650182 + 0.522303899840654 NA promoter-TSS (NR_104608) promoter-TSS (NR_104608) -7 NR_104608 19819 Mm.10152 NM_011275 ENSMUSG00000020630 Rnaseh1 - ribonuclease H1 protein-coding common_peak2_85_654_-0.0830116149845068_9.31384528893256_0.522303899840654 chr17 33490700 33493003 + 0.522303899840654 NA Intergenic Intergenic -32345 NR_037707 224697 Mm.29304 NM_172619 ENSMUSG00000024299 Adamts10 9430006O18|AW045948|Adam-ts10|Adamts-10|Znmp a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10 protein-coding common_peak2_89_618_0.0789953495367239_9.31329327398263_0.522303899840654 chr14 20702349 20703696 + 0.522303899840654 NA promoter-TSS (NM_025366) promoter-TSS (NM_025366) -5 NM_025366 66121 Mm.246996 NM_025366 ENSMUSG00000063787 Chchd1 1110001O19Rik|2400010G13Rik|MRP-S37 coiled-coil-helix-coiled-coil-helix domain containing 1 protein-coding common_peak2_85_654_-0.0830116149845068_9.31384528893256_0.522303899840654-2 chr4 107922608 107924100 + 0.522303899840654 NA exon (NM_009949, exon 1 of 5) exon (NM_009949, exon 1 of 5) 235 NM_009949 12896 Mm.307620 NM_009949 ENSMUSG00000028607 Cpt2 AI323697|CPTII carnitine palmitoyltransferase 2 protein-coding unique_peak2_19_118_-0.203683535677167_6.79297599546936_0.522277559749933-2 chr2 150295265 150296401 + 0.522277559749933 NA Intergenic L1_Mus3|LINE|L1 38316 NM_001142410 100216455 Mm.484816 NM_001142410 ENSMUSG00000079008 Gm14124 EG640962|ENSMUSG00000074735|Gm10749|OTTMUSG00000015734 predicted gene 14124 protein-coding unique_peak2_19_118_-0.203683535677167_6.79297599546936_0.522277559749933 chr12 73640503 73641345 + 0.522277559749933 NA intron (NM_001313977, intron 2 of 14) intron (NM_001313977, intron 2 of 14) 56128 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding unique_peak2_19_118_-0.203683535677167_6.79297599546936_0.522277559749933-4 chr6 99428079 99429109 + 0.522277559749933 NA intron (NM_053202, intron 1 of 18) intron (NM_053202, intron 1 of 18) 6751 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_19_118_-0.203683535677167_6.79297599546936_0.522277559749933-3 chr11 79653029 79653538 + 0.522277559749933 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) 21803 NR_045898 72218 Mm.443271 NR_045898 ENSMUSG00000086569 Rab11fip4os2 1700020F10Rik|4930542H20Rik|Rab11fib4os2 RAB11 family interacting protein 4 (class II), opposite strand 2 ncRNA common_peak1_19_118_-0.203683535677167_6.79297599546936_0.522277559749933 chr11 52274754 52275197 + 0.522277559749933 NA intron (NM_001313981, intron 3 of 10) intron (NM_001313981, intron 3 of 10) 7620 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak1_19_118_-0.203683535677167_6.79297599546936_0.522277559749933-2 chr11 53783597 53784086 + 0.522277559749933 NA Intergenic Intergenic 13368 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding unique_peak2_19_118_-0.203683535677167_6.79297599546936_0.522277559749933-3 chr5 73222899 73223789 + 0.522277559749933 NA intron (NM_028194, intron 1 of 62) Lx8b|LINE|L1 33274 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding unique_peak2_37_206_0.133489557083921_7.76023173604129_0.522275976045285 chr4 132842354 132843783 + 0.522275976045285 NA exon (NM_146154, exon 1 of 7) exon (NM_146154, exon 1 of 7) 101 NM_001290725 100336 Mm.105230 NM_146154 ENSMUSG00000028882 Ppp1r8 6330548N22Rik|AU044684|NIPP1 protein phosphatase 1, regulatory (inhibitor) subunit 8 protein-coding common_peak2_37_206_0.133489557083921_7.76023173604129_0.522275976045285-2 chr14 121312115 121313502 + 0.522275976045285 NA intron (NM_145465, intron 2 of 10) intron (NM_145465, intron 2 of 10) 66422 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_37_206_0.133489557083921_7.76023173604129_0.522275976045285 chr13 119408607 119409668 + 0.522275976045285 NA promoter-TSS (NM_008710) promoter-TSS (NM_008710) 120 NM_001308506 18115 Mm.132584 NM_008710 ENSMUSG00000025453 Nnt 4930423F13Rik|AI323702|BB168308 nicotinamide nucleotide transhydrogenase protein-coding common_peak1_110_805_0.0692821388367282_9.68927709794633_0.522145707172101 chr17 24886634 24887483 + 0.522145707172101 NA promoter-TSS (NM_027141) promoter-TSS (NM_027141) 384 NM_001163751 79043 Mm.274794 NM_027141 ENSMUSG00000024160 Spsb3 2310012N15Rik|3300001M01Rik|SSB3|Tce1|mKIAA4204 splA/ryanodine receptor domain and SOCS box containing 3 protein-coding common_peak2_46_271_0.115668246175678_8.14529696433818_0.522080029437623 chr10 83954402 83954722 + 0.522080029437623 NA Intergenic (CATTC)n|Simple_repeat|Simple_repeat 231697 NM_001145198 69784 Mm.271188 NM_001145198 ENSMUSG00000087651 1500009L16Rik 2700050C19Rik|OCC-1 RIKEN cDNA 1500009L16 gene protein-coding common_peak2_46_271_0.115668246175678_8.14529696433818_0.522080029437623-2 chr9 70371106 70372604 + 0.522080029437623 NA intron (NM_181072, intron 22 of 27) intron (NM_181072, intron 22 of 27) 33898 NR_049200 100885839 NR_049200 ENSMUSG00000093763 Mir5626 Gm25590|mir-5626|mmu-mir-5626 microRNA 5626 ncRNA common_peak1_110_888_-0.0721214414650735_9.75997888809723_0.521955714326588 chr1 21347107 21349135 + 0.521955714326588 NA Intergenic B2_Mm2|SINE|B2 -1556 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak2_37_249_-0.138807770078841_7.89638039962267_0.521905446441514-2 chr2 144223868 144225242 + 0.521905446441514 NA Intergenic L1MCa|LINE|L1 -35265 NM_001033778 common_peak1_37_249_-0.138807770078841_7.89638039962267_0.521905446441514 chr10 78303315 78303956 + 0.521905446441514 NA intron (NM_053014, intron 2 of 9) intron (NM_053014, intron 2 of 9) 36572 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA common_peak2_37_249_-0.138807770078841_7.89638039962267_0.521905446441514 chr13 48624934 48625647 + 0.521905446441514 NA intron (NM_207232, intron 1 of 9) CpG 382 NM_207232 218232 Mm.315089 NM_207232 ENSMUSG00000038042 Ptpdc1 AI843923|AW456874|Naa-1|Ptpcd1 protein tyrosine phosphatase domain containing 1 protein-coding common_peak2_40_227_0.128553250900684_7.89716663961508_0.521905446441514 chr5 52668969 52670086 + 0.521905446441514 NA intron (NM_172490, intron 1 of 10) CpG 174 NM_172490 211006 Mm.244719 NM_172490 ENSMUSG00000029173 Sepsecs AA986712|D5Ertd135e|SLA|SecS Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase protein-coding common_peak1_40_227_0.128553250900684_7.89716663961508_0.521905446441514 chr8 94415107 94415974 + 0.521905446441514 NA Intergenic Intergenic 19563 NR_015514 320377 Mm.486022 NR_015514 9330175E14Rik A630085K21 RIKEN cDNA 9330175E14 gene ncRNA common_peak2_367_3593_0.0335353553289899_11.8281423711744_0.521885115592253 chr1 85749611 85754080 + 0.521885115592253 NA promoter-TSS (NR_106172) promoter-TSS (NR_106172) -103 NR_106172 102466882 NR_106172 ENSMUSG00000098634 Mir8096 Gm27479|mmu-mir-8096 microRNA 8096 ncRNA common_peak1_46_320_-0.123298399696285_8.26478028727416_0.521768903059178 chr15 5513322 5514070 + 0.521768903059178 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 17378 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_43_249_0.12062576921822_8.0260971692712_0.521583221686404 chr11 63920884 63921570 + 0.521583221686404 NA intron (NM_018805, intron 1 of 1) CpG 1057 NM_018805 54710 Mm.274426 NM_018805 ENSMUSG00000070407 Hs3st3b1 3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 protein-coding common_peak1_40_272_-0.131313875854427_8.02710020299264_0.521583221686404 chr9 46174873 46175524 + 0.521583221686404 NA intron (NM_027498, intron 4 of 24) intron (NM_027498, intron 4 of 24) -53432 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding common_peak2_40_272_-0.131313875854427_8.02710020299264_0.521583221686404 chr10 43901026 43902266 + 0.521583221686404 NA promoter-TSS (NM_130892) promoter-TSS (NM_130892) 90 NM_001081054 76563 Mm.5904 NM_001081054 ENSMUSG00000019863 Qrsl1 2700038P16Rik|C80053|GatA glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 protein-coding common_peak2_106_768_0.0721306313939465_9.6229051036588_0.521507722191399 chr4 140956202 140958268 + 0.521507722191399 NA intron (NR_045911, intron 1 of 3) intron (NR_045911, intron 1 of 3) 667 NR_045911 100126227 Mm.404073 NR_045911 ENSMUSG00000087698 Gm13031 OTTMUSG00000010081 predicted gene 13031 ncRNA common_peak1_43_296_-0.127909066920459_8.15036458734054_0.521301219694443 chrX 135007884 135008692 + 0.521301219694443 NA intron (NM_175446, intron 1 of 6) intron (NM_175446, intron 1 of 6) 921 NM_175446 215693 Mm.336238 NM_175446 ENSMUSG00000052676 Zmat1 A230096A06|AW990744|B930008K04Rik zinc finger, matrin type 1 protein-coding common_peak1_56_346_0.105706866971913_8.49164528606422_0.521249139715082 chr11 79033463 79034358 + 0.521249139715082 NA non-coding (NR_045873, exon 6 of 6) non-coding (NR_045873, exon 6 of 6) 10313 NR_045873 790910 Mm.440410 NR_045873 Gm11201 ENSMUSG00000072637|OTTMUSG00000000169 predicted gene 11201 ncRNA common_peak1_70_521_-0.0947464507228677_8.98053277120845_0.521224046318846 chr1 59236854 59238302 + 0.521224046318846 NA promoter-TSS (NM_001159948) promoter-TSS (NM_001159948) -347 NM_146109 74018 Mm.272078 NM_028717 ENSMUSG00000026024 Als2 3222402C23Rik|9430073A21Rik|Als2cr6|Alsin|mKIAA1563 amyotrophic lateral sclerosis 2 (juvenile) protein-coding common_peak2_70_521_-0.0947464507228677_8.98053277120845_0.521224046318846 chr9 67043043 67044515 + 0.521224046318846 NA promoter-TSS (NM_001164252) promoter-TSS (NM_001164252) 92 NM_001164252 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak2_124_934_0.0652982242397044_9.90147166689485_0.520922344943071 chr2 112454363 112455770 + 0.520922344943071 NA promoter-TSS (NM_133749) promoter-TSS (NM_133749) 41 NM_133749 73024 Mm.268027 NM_133749 ENSMUSG00000055943 Emc7 2900064A13Rik|AI451465|ORF3|c11orf3 ER membrane protein complex subunit 7 protein-coding common_peak1_276_2669_-0.0404039775273866_11.3624220378112_0.520823865803993 chr8 72349090 72352274 + 0.520823865803993 NA intron (NM_007944, intron 22 of 23) (TAA)n|Simple_repeat|Simple_repeat 31620 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_228_1992_0.0447418999191154_10.9830969447986_0.520761259800815 chr7 90354041 90355747 + 0.520761259800815 NA intron (NM_001289583, intron 2 of 19) intron (NM_001289583, intron 2 of 19) -32087 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_63_460_-0.0991450549314585_8.79905041296361_0.520658695380833 chr16 21422506 21423937 + 0.520658695380833 NA 5' UTR (NM_001285894, exon 1 of 46) 5' UTR (NM_001285894, exon 1 of 46) 103 NM_001285894 209018 Mm.235683 NM_145948 ENSMUSG00000033653 Vps8 AI315068|AU040738|mKIAA0804 VPS8 CORVET complex subunit protein-coding common_peak1_63_460_-0.0991450549314585_8.79905041296361_0.520658695380833 chr1 43163587 43164316 + 0.520658695380833 NA promoter-TSS (NM_010212) promoter-TSS (NM_010212) 10 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_63_460_-0.0991450549314585_8.79905041296361_0.520658695380833-2 chr9 59291542 59292251 + 0.520658695380833 NA intron (NM_028121, intron 1 of 6) CpG 324 NM_028121 72141 Mm.22456 NM_028121 ENSMUSG00000025236 Adpgk 2610017G09Rik|Adp-gk|C77577 ADP-dependent glucokinase protein-coding common_peak1_102_812_-0.0755636582982877_9.62932971292588_0.520393960928681 chr14 44988549 44989840 + 0.520393960928681 NA exon (NM_008964, exon 1 of 2) exon (NM_008964, exon 1 of 2) 1083 NM_008964 19217 Mm.4630 NM_008964 ENSMUSG00000037759 Ptger2 EP2|Ptgerep2 prostaglandin E receptor 2 (subtype EP2) protein-coding common_peak2_240_2256_-0.0443392079371865_11.1180210992232_0.520335030363887 chr12 70967512 70970266 + 0.520335030363887 NA Intergenic Intergenic -5734 NM_001310595 19167 Mm.296338 NM_011184 ENSMUSG00000060073 Psma3 Lmpc8 proteasome (prosome, macropain) subunit, alpha type 3 protein-coding common_peak2_195_1758_-0.0504389081885641_10.7553203133777_0.519695383425595 chr5 33017679 33020288 + 0.519695383425595 NA 5' UTR (NM_011738, exon 1 of 2) 5' UTR (NM_011738, exon 1 of 2) 167 NM_011738 22629 Mm.332314 NM_011738 ENSMUSG00000018965 Ywhah - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide protein-coding common_peak1_29_152_0.151268589905051_7.33302213764518_0.519639915320346-2 chr6 95117847 95118470 + 0.519639915320346 NA intron (NM_001102670, intron 1 of 2) CpG 278 NM_001008785 243574 Mm.333275 NM_001008785 ENSMUSG00000030031 Kbtbd8 AU040152|SSEC-51|SSEC51|Takrp|mKIAA1842 kelch repeat and BTB (POZ) domain containing 8 protein-coding common_peak1_29_152_0.151268589905051_7.33302213764518_0.519639915320346 chr3 27182796 27183431 + 0.519639915320346 NA exon (NM_178772, exon 1 of 5) exon (NM_178772, exon 1 of 5) 109 NM_178772 320024 Mm.24576 NM_178772 ENSMUSG00000027698 Nceh1 Aadacl1|B230106I24Rik|CPO-BP|Nceh neutral cholesterol ester hydrolase 1 protein-coding common_peak1_29_152_0.151268589905051_7.33302213764518_0.519639915320346-3 chr9 62122205 62122694 + 0.519639915320346 NA TTS (NR_039595) TTS (NR_039595) 145 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA common_peak1_53_323_0.108969875141327_8.39433494045529_0.51952431138887 chr11 5261255 5262199 + 0.51952431138887 NA promoter-TSS (NM_032396) promoter-TSS (NM_032396) -117 NM_032396 84035 Mm.209989 NM_032396 ENSMUSG00000020393 Kremen1 AV002070|Kremen|Krm1 kringle containing transmembrane protein 1 protein-coding common_peak2_53_323_0.108969875141327_8.39433494045529_0.51952431138887 chr11 98962648 98964473 + 0.51952431138887 NA intron (NM_001176528, intron 1 of 7) intron (NM_001176528, intron 1 of 7) 3089 NM_001176528 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak1_53_376_-0.109600835242713_8.50362029564731_0.519425789634158 chr9 95511217 95511998 + 0.519425789634158 NA intron (NM_026476, intron 1 of 26) CpG 389 NM_026476 67958 Mm.292742 NM_026476 ENSMUSG00000032407 U2surp 2610101N10Rik|AU023006|Sr140 U2 snRNP-associated SURP domain containing protein-coding common_peak1_86_663_-0.0822416006810727_9.33391863100639_0.519215549392634 chr12 98746910 98747658 + 0.519215549392634 NA intron (NR_027648, intron 1 of 12) CpG 316 NM_029334 75553 Mm.25549 NM_029334 ENSMUSG00000021012 Zc3h14 1010001P15Rik|1700016A15Rik|2700069A02Rik|AU014748 zinc finger CCCH type containing 14 protein-coding common_peak2_330_3150_0.0357982056445305_11.6394931418398_0.518863657549661 chr15 98829804 98833366 + 0.518863657549661 NA promoter-TSS (NM_016781) promoter-TSS (NM_016781) -77 NM_016781 19082 Mm.6670 NM_016781 ENSMUSG00000067713 Prkag1 AA571379|BB036179|Prkaac protein kinase, AMP-activated, gamma 1 non-catalytic subunit protein-coding common_peak1_67_495_-0.0974354270399918_8.90547859686688_0.518668010336591 chr11 23632923 23633698 + 0.518668010336591 NA intron (NM_027860, intron 1 of 21) CpG 321 NM_027860 71675 Mm.48031 NM_027860 ENSMUSG00000042208 0610010F05Rik Kiaa1841|mKIAA1841 RIKEN cDNA 0610010F05 gene protein-coding unique_peak2_11_66_-0.278926033552032_5.92662617368176_0.518477330661964 chr18 79085448 79086102 + 0.518477330661964 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 23616 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak2_116_860_0.0672085383643015_9.78347369657899_0.518444305935539 chr10 57751963 57754356 + 0.518444305935539 NA Intergenic Intergenic -31764 NM_021272 12140 Mm.3644 NM_021272 ENSMUSG00000019874 Fabp7 B-FABP|BFABP|Blbp|MRG fatty acid binding protein 7, brain protein-coding common_peak2_17_78_0.200904613695564_6.40423305502489_0.518391894242941 chr9 96119354 96119779 + 0.518391894242941 NA exon (NM_177352, exon 1 of 17) exon (NM_177352, exon 1 of 17) 137 NM_177352 235533 Mm.213651 NM_177352 ENSMUSG00000041440 Gk5 AV095337|C330018K18Rik|G630067D24Rik glycerol kinase 5 (putative) protein-coding unique_peak2_17_78_0.200904613695564_6.40423305502489_0.518391894242941-2 chr12 99468301 99468948 + 0.518391894242941 NA Intergenic Intergenic -18550 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak1_17_78_0.200904613695564_6.40423305502489_0.518391894242941 chr11 107447045 107447493 + 0.518391894242941 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 23451 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_17_78_0.200904613695564_6.40423305502489_0.518391894242941-2 chr14 60130508 60130922 + 0.518391894242941 NA Intergenic Intergenic -43881 NM_015803 50769 Mm.319599 NM_015803 ENSMUSG00000021983 Atp8a2 AI415030|Atpc1b|agil|wl ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 protein-coding unique_peak2_17_78_0.200904613695564_6.40423305502489_0.518391894242941 chr11 83620931 83621797 + 0.518391894242941 NA non-coding (NR_036453, exon 7 of 9) non-coding (NR_036453, exon 7 of 9) 28014 NM_011337 20302 Mm.1282 NM_011337 ENSMUSG00000000982 Ccl3 AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3 chemokine (C-C motif) ligand 3 protein-coding common_peak1_17_105_-0.223235092690532_6.61630290821793_0.518362263498003 chr10 44529578 44530059 + 0.518362263498003 NA Intergenic Intergenic -71070 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding unique_peak2_17_105_-0.223235092690532_6.61630290821793_0.518362263498003 chr1 165669117 165670037 + 0.518362263498003 NA intron (NM_178593, intron 1 of 6) intron (NM_178593, intron 1 of 6) -35036 NM_001083897 68481 Mm.46438 NM_001001880 ENSMUSG00000026566 Mpzl1 1110007A10Rik|PZR myelin protein zero-like 1 protein-coding unique_peak2_17_105_-0.223235092690532_6.61630290821793_0.518362263498003-3 chr9 52070351 52071371 + 0.518362263498003 NA intron (NM_001104616, intron 9 of 13) intron (NM_001104616, intron 9 of 13) -22156 NR_023357 629557 Mm.422775 NR_023357 Gm6981 EG629557 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_17_105_-0.223235092690532_6.61630290821793_0.518362263498003-5 chr2 103073043 103073476 + 0.518362263498003 NA promoter-TSS (NM_019735) promoter-TSS (NM_019735) 254 NM_175094 27402 Mm.315011 NM_175094 ENSMUSG00000010914 Pdhx AI481367|E3bp|Pdx1 pyruvate dehydrogenase complex, component X protein-coding unique_peak2_17_105_-0.223235092690532_6.61630290821793_0.518362263498003-2 chr9 44180742 44181654 + 0.518362263498003 NA intron (NM_007619, intron 2 of 15) intron (NM_007619, intron 2 of 15) 46540 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding common_peak1_17_105_-0.223235092690532_6.61630290821793_0.518362263498003-2 chr14 70276031 70276310 + 0.518362263498003 NA intron (NM_001304992, intron 1 of 12) B4A|SINE|B4 13327 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak1_17_105_-0.223235092690532_6.61630290821793_0.518362263498003-6 chr6 129640349 129640775 + 0.518362263498003 NA intron (NM_021378, intron 3 of 4) intron (NM_021378, intron 3 of 4) 2726 NM_021378 58179 Mm.358684 NM_021378 ENSMUSG00000033027 Klrc3 Klrc2|Nkg2e killer cell lectin-like receptor subfamily C, member 3 protein-coding common_peak1_17_105_-0.223235092690532_6.61630290821793_0.518362263498003-4 chr2 29692587 29693017 + 0.518362263498003 NA intron (NM_054050, intron 5 of 23) intron (NM_054050, intron 5 of 23) -68726 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak1_17_105_-0.223235092690532_6.61630290821793_0.518362263498003-3 chr14 122912699 122913183 + 0.518362263498003 NA intron (NM_145466, intron 1 of 2) CpG 224 NM_145466 223267 Mm.379358 NM_145466 ENSMUSG00000041625 Ggact A2ld1 gamma-glutamylamine cyclotransferase protein-coding unique_peak2_24_153_-0.180771348558517_7.17640086641564_0.518302639354359 chr6 128753840 128754726 + 0.518302639354359 NA Intergenic Intergenic -31237 NM_001099918 100043861 Mm.66911 NM_001099918 ENSMUSG00000079299 Klrb1 4930431A04Rik|Gm4696|Klrb1g|Klrb6|Ly-55|Ly55|NKR-P1G|Nkrp-1e|Nkrp1g killer cell lectin-like receptor subfamily B member 1 protein-coding common_peak2_24_153_-0.180771348558517_7.17640086641564_0.518302639354359 chr9 63610453 63611451 + 0.518302639354359 NA intron (NM_025857, intron 1 of 9) intron (NM_025857, intron 1 of 9) 8297 NM_025857 66939 Mm.34338 NM_025857 ENSMUSG00000037257 Aagab 2310007F21Rik|p34 alpha- and gamma-adaptin binding protein protein-coding common_peak1_24_153_-0.180771348558517_7.17640086641564_0.518302639354359 chr12 80793480 80794106 + 0.518302639354359 NA intron (NM_178682, intron 1 of 5) intron (NM_178682, intron 1 of 5) 3261 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding common_peak1_24_153_-0.180771348558517_7.17640086641564_0.518302639354359-2 chr7 24458129 24458768 + 0.518302639354359 NA Intergenic RLTR9A|LTR|ERVK -4052 NM_011113 18793 Mm.1359 NM_011113 ENSMUSG00000046223 Plaur Cd87|u-PAR|uPAR plasminogen activator, urokinase receptor protein-coding common_peak2_60_435_-0.103664873729954_8.71635188791195_0.518220290636003 chr10 75763654 75765430 + 0.518220290636003 NA promoter-TSS (NM_172549) promoter-TSS (NM_172549) -185 NM_172549 104248 Mm.257404 NM_172549 ENSMUSG00000020196 Cabin1 A330070M20Rik|Cain|Ppp3in calcineurin binding protein 1 protein-coding common_peak1_352_3579_-0.0344766614916558_11.7885055414058_0.517629789478309 chr19 4118144 4121764 + 0.517629789478309 NA intron (NM_016666, intron 2 of 6) MIRb|SINE|MIR 1621 NM_001276284 11632 Mm.10433 NM_016666 ENSMUSG00000024847 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2 aryl-hydrocarbon receptor-interacting protein protein-coding common_peak2_50_352_-0.115853596143724_8.40559757519932_0.517589780424815 chr6 29231466 29233186 + 0.517589780424815 NA Intergenic Intergenic -15962 NM_001302934 23917 Mm.260707 NM_011829 ENSMUSG00000003500 Impdh1 B930086D20Rik|IMPDH-I inosine 5'-phosphate dehydrogenase 1 protein-coding common_peak1_50_352_-0.115853596143724_8.40559757519932_0.517589780424815 chr2 26351370 26352047 + 0.517589780424815 NA TTS (NM_001037747) TTS (NM_001037747) 402 NM_026828 52838 Mm.31239 NM_026828 ENSMUSG00000075467 Dnlz 1110034G11Rik|D2Bwg1335e|HEP1 DNL-type zinc finger protein-coding unique_peak2_50_352_-0.115853596143724_8.40559757519932_0.517589780424815 chr1 130474234 130475993 + 0.517589780424815 NA Intergenic MER102a|DNA|hAT-Charlie -12373 NM_010016 13136 Mm.101591 NM_010016 ENSMUSG00000026399 Cd55 Daf|Daf-GPI|Daf1|GPI-DAF CD55 molecule, decay accelerating factor for complement protein-coding common_peak2_50_301_0.109266037802378_8.29303775822627_0.51754197201586 chr11 100396822 100398476 + 0.51754197201586 NA promoter-TSS (NR_132425) promoter-TSS (NR_132425) 141 NM_010593 16480 Mm.299774 NM_010593 ENSMUSG00000001552 Jup Ctnng|D930025P04Rik|PG junction plakoglobin protein-coding common_peak2_99_783_-0.0754700296061124_9.57697482931215_0.517347526911599 chr19 41895081 41896708 + 0.517347526911599 NA intron (NM_199447, intron 1 of 33) CpG 259 NM_199447 107094 Mm.276044 NM_199447 ENSMUSG00000035049 Rrp12 AA408556|AA536972|mKIAA0690 ribosomal RNA processing 12 homolog (S. cerevisiae) protein-coding common_peak2_99_783_-0.0754700296061124_9.57697482931215_0.517347526911599-2 chr6 37441302 37443228 + 0.517347526911599 NA promoter-TSS (NM_178661) promoter-TSS (NM_178661) -117 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak2_332_3335_-0.0358508899266852_11.6859781284813_0.517259914368533 chr15 27679031 27682302 + 0.517259914368533 NA intron (NM_001242424, intron 1 of 8) intron (NM_001242424, intron 1 of 8) 876 NM_001242424 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_231_2025_0.0440817892704981_11.0064593534364_0.517235872575985 chr17 32401912 32404163 + 0.517235872575985 NA promoter-TSS (NR_029458) promoter-TSS (NR_029458) 23 NR_029458 664702 Mm.381066 NR_029458 A530088E08Rik - RIKEN cDNA A530088E08 gene ncRNA unique_peak2_32_211_-0.150600506902319_7.65262020111204_0.517186124756634 chr16 31234216 31235480 + 0.517186124756634 NA intron (NR_035427, intron 1 of 2) (CA)n|Simple_repeat|Simple_repeat -33610 NM_030138 78618 Mm.274646 NM_030138 ENSMUSG00000049076 Acap2 4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding common_peak2_32_211_-0.150600506902319_7.65262020111204_0.517186124756634 chr9 72449020 72450095 + 0.517186124756634 NA exon (NM_008613, exon 7 of 10) exon (NM_008613, exon 7 of 10) 11028 NM_008613 17427 Mm.387671 NM_008613 ENSMUSG00000032221 Mns1 AW546487 meiosis-specific nuclear structural protein 1 protein-coding common_peak2_32_172_0.142691720024155_7.5059740876488_0.517079545994701 chr5 21424868 21425642 + 0.517079545994701 NA promoter-TSS (NM_029195) promoter-TSS (NM_029195) 352 NM_177869 330050 Mm.40655 NM_177869 ENSMUSG00000047221 Fam185a 4631428I10|AI847670 family with sequence similarity 185, member A protein-coding common_peak2_32_172_0.142691720024155_7.5059740876488_0.517079545994701-2 chr8 61305038 61306133 + 0.517079545994701 NA intron (NM_021506, intron 2 of 11) ORR1B1|LTR|ERVL-MaLR -16713 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak1_32_172_0.142691720024155_7.5059740876488_0.517079545994701 chr7 44467988 44468434 + 0.517079545994701 NA TTS (NM_026690) TTS (NM_026690) 231 NM_001205070 66124 Mm.358691 NM_025368 ENSMUSG00000038695 Josd2 1110007C05Rik Josephin domain containing 2 protein-coding unique_peak2_32_172_0.142691720024155_7.5059740876488_0.517079545994701 chr3 19450262 19451077 + 0.517079545994701 NA Intergenic Intergenic -57926 NM_001163536 66326 Mm.45615 NM_025489 ENSMUSG00000027606 Dnajc5b 1700008A05Rik DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding common_peak2_140_1087_0.0598027623289639_10.1173642224148_0.517020118518685 chr9 32614960 32618203 + 0.517020118518685 NA Intergenic Intergenic -75129 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak2_75_564_-0.0885182315329462_9.09784794153608_0.517020090718405 chr10 42268415 42270477 + 0.517020090718405 NA intron (NM_019740, intron 2 of 3) intron (NM_019740, intron 2 of 3) 7296 NM_019740 56484 Mm.338613 NM_019740 ENSMUSG00000048756 Foxo3 1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a forkhead box O3 protein-coding common_peak2_47_278_0.116266467449265_8.18225454555382_0.516741252554083 chr5 115483878 115485086 + 0.516741252554083 NA promoter-TSS (NM_001167691) promoter-TSS (NM_001167691) 2 NM_133760 75387 Mm.332616 NM_133760 ENSMUSG00000029524 Sirt4 4930596O17Rik sirtuin 4 protein-coding common_peak1_155_1335_-0.0575362204934784_10.3549361822273_0.516698447199878 chr19 5877107 5878759 + 0.516698447199878 NA promoter-TSS (NM_134154) promoter-TSS (NM_134154) -533 NM_134154 107375 Mm.5323 NM_134154 ENSMUSG00000024818 Slc25a45 AW491445 solute carrier family 25, member 45 protein-coding common_peak1_57_409_-0.10420447380652_8.62737786260218_0.516573158174214 chr19 6840120 6841271 + 0.516573158174214 NA promoter-TSS (NM_019924) promoter-TSS (NM_019924) -68 NM_019924 56613 Mm.20914 NM_019924 ENSMUSG00000024952 Rps6ka4 1110069D02Rik|90kDa|AI848992|Msk2|mMSK2 ribosomal protein S6 kinase, polypeptide 4 protein-coding common_peak2_57_409_-0.10420447380652_8.62737786260218_0.516573158174214 chr19 46738650 46740810 + 0.516573158174214 NA intron (NM_020577, intron 10 of 10) PB1D7|SINE|Alu -21879 NM_033569 94219 Mm.306903 NM_033569 ENSMUSG00000064105 Cnnm2 AU015877|AW048635|Acdp2|Clp2 cyclin M2 protein-coding common_peak2_268_2576_-0.0411177002906111_11.3109179717143_0.516474764024127 chr6 31190466 31194204 + 0.516474764024127 NA intron (NR_110470, intron 1 of 2) intron (NR_110470, intron 1 of 2) 26139 NR_110470 232685 Mm.443019 NM_144555 ENSMUSG00000044471 Lncpint Lincpint|MNCb-1768|Pint|linc-Pint long non-protein coding RNA, Trp53 induced transcript ncRNA common_peak2_91_709_-0.0799897879258218_9.43168032042913_0.516316127496841 chr2 26020679 26022229 + 0.516316127496841 NA exon (NM_133835, exon 1 of 10) exon (NM_133835, exon 1 of 10) 306 NM_133835 98766 Mm.247824 NM_133835 ENSMUSG00000036352 Ubac1 1110033G07Rik|AA407978|GBDR1|Gdbr1|Kpc2|Ubadc1 ubiquitin associated domain containing 1 protein-coding common_peak1_108_787_0.0696904160732608_9.65689702749301_0.516315720781793 chr2 117120597 117121904 + 0.516315720781793 NA 5' UTR (NM_001277256, exon 1 of 5) 5' UTR (NM_001277256, exon 1 of 5) 179 NM_033524 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding common_peak1_35_233_-0.139067046524382_7.80083119632121_0.516305295578723-2 chr2 3658279 3658924 + 0.516305295578723 NA Intergenic B4A|SINE|B4 -54857 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_35_233_-0.139067046524382_7.80083119632121_0.516305295578723-3 chrX 167133969 167134760 + 0.516305295578723 NA Intergenic Intergenic -63994 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak1_35_233_-0.139067046524382_7.80083119632121_0.516305295578723 chr1 55237203 55237839 + 0.516305295578723 NA exon (NM_175439, exon 1 of 1) exon (NM_175439, exon 1 of 1) 344 NM_175439 212679 Mm.19223 NM_175439 ENSMUSG00000046994 Mars2 C730026E21Rik|MetRS methionine-tRNA synthetase 2 (mitochondrial) protein-coding common_peak2_35_233_-0.139067046524382_7.80083119632121_0.516305295578723 chr4 117550226 117550951 + 0.516305295578723 NA 5' UTR (NM_080469, exon 1 of 9) 5' UTR (NM_080469, exon 1 of 9) 223 NM_080469 140546 Mm.235891 NM_080469 ENSMUSG00000033423 Eri3 PINT1|Prnpip1 exoribonuclease 3 protein-coding common_peak1_64_410_0.0939199366512131_8.72995455200729_0.516172938650985 chr4 63558316 63559270 + 0.516172938650985 NA Intergenic CpG -1567 NM_144905 230279 Mm.41523 NM_144905 ENSMUSG00000045917 Tmem268 6330416G13Rik|AW492431|bM230C2.2 transmembrane protein 268 protein-coding common_peak2_64_410_0.0939199366512131_8.72995455200729_0.516172938650985 chr11 115230871 115232441 + 0.516172938650985 NA intron (NM_001033393, intron 9 of 9) intron (NM_001033393, intron 9 of 9) 35587 NM_010350 14813 Mm.39090 NM_010350 ENSMUSG00000020734 Grin2c GluN2C|NMDAR2C|NR2C glutamate receptor, ionotropic, NMDA2C (epsilon 3) protein-coding common_peak2_64_410_0.0939199366512131_8.72995455200729_0.516172938650985-2 chr8 126866560 126867769 + 0.516172938650985 NA Intergenic Intergenic 78757 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding common_peak1_35_192_0.138840635790943_7.66187735516355_0.516115167204622-3 chr2 68874150 68874861 + 0.516115167204622 NA intron (NM_172856, intron 1 of 9) intron (NM_172856, intron 1 of 9) 12948 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak1_35_192_0.138840635790943_7.66187735516355_0.516115167204622 chr17 88122884 88123663 + 0.516115167204622 NA Intergenic Intergenic -2239 NM_001190356 225058 Mm.312053 NM_001190356 Gm4832 EG225058 predicted gene 4832 protein-coding unique_peak2_35_192_0.138840635790943_7.66187735516355_0.516115167204622 chr13 102121738 102123036 + 0.516115167204622 NA Intergenic Intergenic -354170 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_35_192_0.138840635790943_7.66187735516355_0.516115167204622-2 chr18 61725724 61726314 + 0.516115167204622 NA promoter-TSS (NR_029432) promoter-TSS (NR_029432) 312 NM_021296 17714 Mm.269657 NM_021296 ENSMUSG00000024580 Grpel2 mt-GrpE#2|mt-Grpel2 GrpE-like 2, mitochondrial protein-coding common_peak2_35_192_0.138840635790943_7.66187735516355_0.516115167204622 chr18 65207241 65208599 + 0.516115167204622 NA intron (NM_031881, intron 25 of 29) intron (NM_031881, intron 25 of 29) -40941 NR_029600 387231 NR_029600 ENSMUSG00000065402 Mir122 Mir122a|Mirn122a|mir-122|mmu-mir-122 microRNA 122 ncRNA unique_peak2_44_303_-0.121748875878954_8.18705307550411_0.515999555398 chr5 137704808 137706440 + 0.515999555398 NA Intergenic Intergenic -20871 NM_178162 231801 Mm.260869 NM_145566 ENSMUSG00000029722 Agfg2 A630095P14Rik|Hrbl|RAB-R|RABR ArfGAP with FG repeats 2 protein-coding unique_peak2_15_92_-0.242905547982863_6.4177060371166_0.515844704882417 chr10 78285493 78286264 + 0.515844704882417 NA intron (NM_053014, intron 3 of 9) intron (NM_053014, intron 3 of 9) -41236 NM_001081055 216131 Mm.27539 NM_001081055 ENSMUSG00000000374 Trappc10 B230307C21Rik|Gm870|Tmem1 trafficking protein particle complex 10 protein-coding common_peak1_15_92_-0.242905547982863_6.4177060371166_0.515844704882417-3 chr14 77519237 77519715 + 0.515844704882417 NA intron (NM_172813, intron 7 of 18) RLTR25A|LTR|ERVK -12608 NR_033141 629678 Mm.390721 NM_001037935 ENSMUSG00000067973 Gm6994 EG629678 predicted gene 6994 ncRNA common_peak1_15_92_-0.242905547982863_6.4177060371166_0.515844704882417 chr1 87899941 87900395 + 0.515844704882417 NA intron (NM_177646, intron 3 of 29) B1_Mus1|SINE|Alu 46881 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak1_15_92_-0.242905547982863_6.4177060371166_0.515844704882417-2 chr11 49080620 49081089 + 0.515844704882417 NA intron (NM_001271677, intron 1 of 2) intron (NM_001271677, intron 1 of 2) 4267 NM_001271677 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak1_44_256_0.120554088370753_8.06590159337926_0.515808127703772 chr1 187215244 187216066 + 0.515808127703772 NA promoter-TSS (NM_029067) promoter-TSS (NM_029067) 144 NM_026367 67769 Mm.138321 NM_026367 ENSMUSG00000039210 Gpatch2 5830433G22Rik|5830436K05Rik|AI427714|AI447508|AW107440|AW491060|Gpatc2 G patch domain containing 2 protein-coding common_peak1_104_830_-0.0731244360935257_9.66214244872358_0.515518203841226 chr5 137306813 137308266 + 0.515518203841226 NA 5' UTR (NM_031405, exon 1 of 20) 5' UTR (NM_031405, exon 1 of 20) 135 NM_031405 83701 Mm.387734 NM_031405 ENSMUSG00000037364 Srrt 2810019G02Rik|ASR2A|ASR2B|ASR2C|ASR2D|Ars2|Asr2 serrate RNA effector molecule homolog (Arabidopsis) protein-coding common_peak2_269_2446_0.0401270788248826_11.2768619254918_0.515471103265764 chr19 44265104 44268468 + 0.515471103265764 NA Intergenic L1M4|LINE|L1 -26890 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak1_15_67_0.208790421874829_6.19185805218775_0.515444410977657-2 chr7 141131337 141131718 + 0.515444410977657 NA intron (NM_013782, intron 1 of 11) CpG 241 NM_013782 27388 Mm.293591 NM_013782 ENSMUSG00000025495 Ptdss2 AI481134|AI988017|PSS2 phosphatidylserine synthase 2 protein-coding unique_peak2_13_79_-0.261975656055792_6.19094026685947_0.515444410977657 chr10 127109406 127110252 + 0.515444410977657 NA intron (NM_001171026, intron 5 of 14) intron (NM_001171026, intron 5 of 14) 11331 NM_177614 216440 Mm.295246 NM_177614 ENSMUSG00000040462 Os9 4632413K17Rik|AU022351 amplified in osteosarcoma protein-coding common_peak1_13_79_-0.261975656055792_6.19094026685947_0.515444410977657-2 chr2 165285918 165286333 + 0.515444410977657 NA intron (NM_144893, intron 1 of 9) intron (NM_144893, intron 1 of 9) 1662 NM_001252574 228875 Mm.21184 NM_144893 ENSMUSG00000017664 Slc35c2 C85957|CGI-15|D2Wsu58e|Ovcov1 solute carrier family 35, member C2 protein-coding unique_peak2_15_67_0.208790421874829_6.19185805218775_0.515444410977657 chr10 84440751 84441279 + 0.515444410977657 NA promoter-TSS (NM_001004363) promoter-TSS (NM_001004363) -544 NM_001004363 77976 Mm.25874 NM_001004363 ENSMUSG00000020032 Nuak1 AU014801|AW494241|B230104P22Rik|Omphk1 NUAK family, SNF1-like kinase, 1 protein-coding unique_peak2_13_79_-0.261975656055792_6.19094026685947_0.515444410977657-3 chr15 86165203 86165737 + 0.515444410977657 NA intron (NM_145475, intron 2 of 12) intron (NM_145475, intron 2 of 12) 20671 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding unique_peak2_13_79_-0.261975656055792_6.19094026685947_0.515444410977657-4 chrX 23661914 23662627 + 0.515444410977657 NA Intergenic L1_Mur3|LINE|L1 -30781 NM_175180 72404 Mm.423 NM_175180 ENSMUSG00000036769 Wdr44 2610034K17Rik|RAB11BP|RPH11 WD repeat domain 44 protein-coding common_peak1_15_67_0.208790421874829_6.19185805218775_0.515444410977657 chr11 107460774 107461208 + 0.515444410977657 NA intron (NM_145823, intron 1 of 9) B1_Mur2|SINE|Alu 9729 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding unique_peak2_15_67_0.208790421874829_6.19185805218775_0.515444410977657-2 chr5 30814561 30815165 + 0.515444410977657 NA 5' UTR (NM_133350, exon 1 of 7) 5' UTR (NM_133350, exon 1 of 7) 222 NM_133350 100732 Mm.332295 NM_133350 ENSMUSG00000029166 Mapre3 AI790651|EB2|EB3|EBF3|RP3 microtubule-associated protein, RP/EB family, member 3 protein-coding common_peak1_13_79_-0.261975656055792_6.19094026685947_0.515444410977657 chr2 30952920 30953297 + 0.515444410977657 NA exon (NM_133673, exon 1 of 5) exon (NM_133673, exon 1 of 5) 107 NM_133673 30934 Mm.249164 NM_133673 ENSMUSG00000026848 Tor1b 2610016F05Rik|DQ1|torsinB torsin family 1, member B protein-coding unique_peak2_13_79_-0.261975656055792_6.19094026685947_0.515444410977657-2 chr11 94521551 94522331 + 0.515444410977657 NA promoter-TSS (NM_170671) promoter-TSS (NM_170671) -439 NM_170671 104601 Mm.84725 NM_170671 ENSMUSG00000039110 Mycbpap 4932408B01Rik|AMAP-1|AW125474 MYCBP associated protein protein-coding common_peak2_166_1449_-0.0550905792143368_10.4742918952951_0.515441906322479 chr2 119111928 119113692 + 0.515441906322479 NA promoter-TSS (NM_011234) promoter-TSS (NM_011234) -7 NM_011234 19361 Mm.330492 NM_011234 ENSMUSG00000027323 Rad51 AV304093|Rad51a|Reca RAD51 recombinase protein-coding common_peak2_104_751_0.0709913789991816_9.59008454117723_0.515381858353994 chr8 13618012 13621934 + 0.515381858353994 NA intron (NM_009025, intron 2 of 23) RSINE1|SINE|B4 -57512 NM_001080781 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak1_38_213_0.131476463206714_7.8072052180045_0.515341383912498-2 chr7 110221779 110222360 + 0.515341383912498 NA intron (NM_009302, intron 1 of 11) CpG 366 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding common_peak1_38_213_0.131476463206714_7.8072052180045_0.515341383912498 chr11 98481810 98482429 + 0.515341383912498 NA intron (NM_011771, intron 6 of 7) intron (NM_011771, intron 6 of 7) 35285 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak2_122_1003_-0.0659657727320617_9.93856066758474_0.515317612351328 chr10 88730396 88732127 + 0.515317612351328 NA promoter-TSS (NM_001037166) promoter-TSS (NM_001037166) -153 NM_025859 104303 Mm.291247 NM_025859 ENSMUSG00000060904 Arl1 2310008D22Rik|AU019749 ADP-ribosylation factor-like 1 protein-coding common_peak1_122_916_0.0647998576236564_9.87317785240688_0.515184902537801 chr2 127207591 127209011 + 0.515184902537801 NA promoter-TSS (NM_177214) promoter-TSS (NM_177214) -21 NM_198630 329509 Mm.120738 NM_198630 ENSMUSG00000044145 1810024B03Rik - RIKEN cDNA 1810024B03 gene protein-coding common_peak2_161_1294_0.0542180116053181_10.3658453883766_0.515063771873374 chr4 109675948 109677719 + 0.515063771873374 NA 5' UTR (NM_007983, exon 1 of 19) 5' UTR (NM_007983, exon 1 of 19) 206 NM_007983 14084 Mm.318259 NM_007983 ENSMUSG00000010517 Faf1 AA408698|Dffrx|Fam Fas-associated factor 1 protein-coding common_peak2_41_280_-0.130339365236072_8.06925663760289_0.515007718524519 chr13 12634477 12636257 + 0.515007718524519 NA intron (NR_003568, intron 1 of 6) intron (NR_003568, intron 1 of 6) 15028 NR_003568 664862 Mm.415635 NR_003568 Gpr137b-ps 2310041G17Rik|ENSMUSG00000075118 G protein-coupled receptor 137B, pseudogene pseudo common_peak1_233_2047_0.0436902769475012_11.0218451384738_0.514947798024659 chr19 23140183 23142404 + 0.514947798024659 NA promoter-TSS (NM_010638) promoter-TSS (NM_010638) 67 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971 Kruppel-like factor 9 protein-coding common_peak2_151_1294_-0.0585352456179589_10.3094687597649_0.514939855164458 chr11 94997302 95001536 + 0.514939855164458 NA intron (NM_172261, intron 3 of 9) intron (NM_172261, intron 3 of 9) 8207 NM_172261 217124 Mm.229087 NM_172261 ENSMUSG00000038976 Ppp1r9b SPL|Spn protein phosphatase 1, regulatory subunit 9B protein-coding unique_peak2_13_56_0.227062424666829_5.94642122649816_0.514932048590334 chr10 122807224 122807699 + 0.514932048590334 NA intron (NM_176919, intron 3 of 8) intron (NM_176919, intron 3 of 8) 128146 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak1_13_56_0.227062424666829_5.94642122649816_0.514932048590334 chr11 54492060 54492411 + 0.514932048590334 NA intron (NM_173753, intron 9 of 17) L1MB3|LINE|L1 -30610 NM_001252494 192786 Mm.254404 NM_175258 ENSMUSG00000037533 Rapgef6 A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052 Rap guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak1_13_56_0.227062424666829_5.94642122649816_0.514932048590334-3 chr6 54698851 54699221 + 0.514932048590334 NA exon (NM_001289741, exon 3 of 5) exon (NM_001289741, exon 3 of 5) 17412 NM_001289740 68235 Mm.233860 NM_026629 ENSMUSG00000038065 Mturn 2410066E13Rik|AI448550|B230212L03Rik maturin, neural progenitor differentiation regulator homolog (Xenopus) protein-coding common_peak1_13_56_0.227062424666829_5.94642122649816_0.514932048590334-2 chr17 8389100 8389514 + 0.514932048590334 NA non-coding (NR_045795, exon 1 of 3) non-coding (NR_045795, exon 1 of 3) 161 NR_045795 100504601 Mm.365131 NR_045795 ENSMUSG00000097796 Gm16702 AU016609 predicted gene, 16702 ncRNA common_peak2_41_235_0.121443905623013_7.94336500217335_0.51471763080224-2 chr8 14888164 14889821 + 0.51471763080224 NA 5' UTR (NM_012000, exon 1 of 3) 5' UTR (NM_012000, exon 1 of 3) 456 NM_012000 26889 Mm.254027 NM_012000 ENSMUSG00000026317 Cln8 mnd ceroid-lipofuscinosis, neuronal 8 protein-coding common_peak1_41_235_0.121443905623013_7.94336500217335_0.51471763080224 chr11 84512941 84513675 + 0.51471763080224 NA exon (NM_019816, exon 1 of 13) exon (NM_019816, exon 1 of 13) 193 NM_019816 56321 Mm.257482 NM_019816 ENSMUSG00000018697 Aatf 4933415H02Rik|5830465M17Rik|Che-1|Trb apoptosis antagonizing transcription factor protein-coding common_peak2_41_235_0.121443905623013_7.94336500217335_0.51471763080224 chr11 29647267 29648666 + 0.51471763080224 NA Intergenic Intergenic -44932 NM_194053 68585 Mm.192580 NM_024226 ENSMUSG00000020458 Rtn4 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 reticulon 4 protein-coding common_peak1_54_384_-0.107423617196348_8.53500282698409_0.514707979176851-2 chr8 26157399 26158097 + 0.514707979176851 NA promoter-TSS (NM_199042) promoter-TSS (NM_199042) -421 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 protein-coding common_peak1_54_384_-0.107423617196348_8.53500282698409_0.514707979176851 chr16 90726592 90727383 + 0.514707979176851 NA intron (NM_025642, intron 1 of 4) CpG 384 NM_025642 66578 Mm.180363 NM_025642 ENSMUSG00000022978 Mis18a 2610039C10Rik|2810018N07Rik MIS18 kinetochore protein A protein-coding unique_peak2_27_174_-0.164646361814404_7.36888793092513_0.514334949543366 chr10 84657798 84658907 + 0.514334949543366 NA intron (NM_027423, intron 12 of 27) intron (NM_027423, intron 12 of 27) 35915 NM_027423 70428 Mm.335007 NM_027423 ENSMUSG00000034453 Polr3b 2700078H01Rik|A330032P03Rik|C85372|RPC2 polymerase (RNA) III (DNA directed) polypeptide B protein-coding common_peak2_27_174_-0.164646361814404_7.36888793092513_0.514334949543366 chr6 135595891 135596855 + 0.514334949543366 NA Intergenic Intergenic -62540 NR_126088 75024 Mm.399147 NR_126088 ENSMUSG00000107396 4930425L21Rik 4930473P14Rik RIKEN cDNA 4930425L21 gene ncRNA unique_peak2_27_174_-0.164646361814404_7.36888793092513_0.514334949543366-2 chr9 95072202 95073370 + 0.514334949543366 NA intron (NM_177909, intron 12 of 15) intron (NM_177909, intron 12 of 15) 320957 NR_106116 102465763 NR_106116 ENSMUSG00000098251 Mir7656 Gm27614|mmu-mir-7656 microRNA 7656 ncRNA common_peak1_27_174_-0.164646361814404_7.36888793092513_0.514334949543366 chr13 101654950 101655539 + 0.514334949543366 NA Intergenic CT-rich|Low_complexity|Low_complexity 37386 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_27_174_-0.164646361814404_7.36888793092513_0.514334949543366-2 chr8 77517239 77517942 + 0.514334949543366 NA non-coding (NR_028125, exon 1 of 1) non-coding (NR_028125, exon 1 of 1) 317 NM_030113 78514 Mm.165974 NM_030113 ENSMUSG00000037148 Arhgap10 A930033B01Rik|PSGAP-m|PSGAP-s Rho GTPase activating protein 10 protein-coding common_peak1_61_443_-0.101121350429443_8.74385519113538_0.514163832386682 chr8 104238925 104240067 + 0.514163832386682 NA intron (NR_045642, intron 4 of 8) intron (NR_045642, intron 4 of 8) 9062 NR_045642 57813 Mm.183110 NM_021028 ENSMUSG00000035824 Tk2 AU024611|mt-TK thymidine kinase 2, mitochondrial protein-coding common_peak2_258_2460_-0.0417091819812789_11.2441743514675_0.51415571773249 chr5 3801642 3804519 + 0.51415571773249 NA promoter-TSS (NM_030675) promoter-TSS (NM_030675) 44 NM_001289528 70797 Mm.130148 NM_001003909 ENSMUSG00000040351 Ankib1 2310061P20Rik|4631416I11Rik|AW494740|C80642|mKIAA1386 ankyrin repeat and IBR domain containing 1 protein-coding common_peak1_109_877_-0.0701737999630865_9.74299022955381_0.514141129179898 chr3 116006705 116008090 + 0.514141129179898 NA promoter-TSS (NM_023214) promoter-TSS (NM_023214) 9 NM_023214 66500 Mm.34550 NM_023214 ENSMUSG00000054414 Slc30a7 1810059J10Rik|2610034N15Rik|4833428C12Rik|AI467242|ZnT-7|ZnT7|Zntl2 solute carrier family 30 (zinc transporter), member 7 protein-coding common_peak2_72_538_-0.0918224363668774_9.02823024456907_0.514050690758392 chr10 30199117 30201185 + 0.514050690758392 NA intron (NM_001109747, intron 1 of 2) intron (NM_001109747, intron 1 of 2) 389 NM_001109747 66311 Mm.251779 NM_001109747 ENSMUSG00000075266 Cenpw 2610036L11Rik|Cug2 centromere protein W protein-coding common_peak1_27_139_0.157281733072959_7.20792388348145_0.513878581595568 chr1 165842030 165842725 + 0.513878581595568 NA intron (NR_103716, intron 1 of 8) intron (NR_103716, intron 1 of 8) 53696 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding unique_peak2_27_139_0.157281733072959_7.20792388348145_0.513878581595568-2 chr4 83308599 83309612 + 0.513878581595568 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 15084 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_27_139_0.157281733072959_7.20792388348145_0.513878581595568-3 chr16 52088593 52089113 + 0.513878581595568 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 57304 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_27_139_0.157281733072959_7.20792388348145_0.513878581595568-2 chr13 29983752 29984330 + 0.513878581595568 NA intron (NM_010093, intron 1 of 6) CpG 350 NM_001289920 13557 Mm.268356 NM_010093 ENSMUSG00000016477 E2f3 E2F3b|E2f3a E2F transcription factor 3 protein-coding common_peak1_27_139_0.157281733072959_7.20792388348145_0.513878581595568-4 chr4 136028276 136028870 + 0.513878581595568 NA Intergenic Intergenic -6924 NM_013736 27224 Mm.27663 NM_013736 ENSMUSG00000028668 Eloa 110kDa|AA408125|Tceb3|Tceb3a elongin A protein-coding unique_peak2_27_139_0.157281733072959_7.20792388348145_0.513878581595568 chr12 21141602 21142591 + 0.513878581595568 NA intron (NM_001135192, intron 1 of 28) intron (NM_001135192, intron 1 of 28) 30340 NM_001135192 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_61_386_0.0971047597762524_8.64474213603254_0.513877760643606 chr2 25179937 25180578 + 0.513877760643606 NA promoter-TSS (NM_025980) promoter-TSS (NM_025980) -501 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak2_234_2058_0.0435085596720821_11.0294823944683_0.513821826634561 chr5 117114646 117116501 + 0.513821826634561 NA intron (NM_178622, intron 1 of 11) CpG 420 NM_001122666 71954 Mm.34456 NM_178622 ENSMUSG00000066900 Suds3 2400003N08Rik|2410008L21Rik|AU067672|mSds3 suppressor of defective silencing 3 homolog (S. cerevisiae) protein-coding common_peak2_72_475_0.0875012630776855_8.93856839484679_0.513785595049779 chr13 102092872 102094900 + 0.513785595049779 NA Intergenic Intergenic -325669 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_162_1304_0.0540103524641236_10.3768392676893_0.513453691933617 chr16 49839233 49840934 + 0.513453691933617 NA Intergenic Intergenic -15571 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_22_139_-0.190822212851456_7.03387191051924_0.513336476218905-3 chrX 77801237 77801614 + 0.513336476218905 NA Intergenic Intergenic -5465 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding unique_peak2_22_139_-0.190822212851456_7.03387191051924_0.513336476218905 chr2 152903693 152904901 + 0.513336476218905 NA Intergenic MER5A|DNA|hAT-Charlie -7055 NM_001081044 228785 Mm.250604 NM_001081044 ENSMUSG00000027470 Mylk2 9830004H17Rik|BB138278 myosin, light polypeptide kinase 2, skeletal muscle protein-coding common_peak1_22_139_-0.190822212851456_7.03387191051924_0.513336476218905 chr15 64031237 64031654 + 0.513336476218905 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 29003 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_22_139_-0.190822212851456_7.03387191051924_0.513336476218905-2 chr6 120181098 120181569 + 0.513336476218905 NA intron (NM_016718, intron 1 of 3) PB1D10|SINE|Alu 87953 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak2_92_645_0.0754263661936658_9.37310353779076_0.513290483288931 chr14 118939747 118942849 + 0.513290483288931 NA intron (NM_008929, intron 1 of 11) intron (NM_008929, intron 1 of 11) 3366 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding common_peak1_297_2915_-0.0382376910329594_11.4906561588105_0.513278094243646 chr6 92090956 92092947 + 0.513278094243646 NA intron (NM_011630, intron 1 of 14) CpG 533 NM_011630 22026 Mm.87062 NM_011630 ENSMUSG00000005893 Nr2c2 TAK1|Tr4|mKIAA4145 nuclear receptor subfamily 2, group C, member 2 protein-coding common_peak1_157_1254_0.0552397534615388_10.3210915255689_0.513267163872983 chr7 75787151 75788722 + 0.513267163872983 NA Intergenic Intergenic -60402 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_76_508_0.085199694697371_9.03412169342438_0.513237381352536 chr2 25185345 25186458 + 0.513237381352536 NA Intergenic CpG 5143 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak1_217_1874_0.0456796664453876_10.8955147134933_0.513169514010843 chr16 84834269 84836227 + 0.513169514010843 NA promoter-TSS (NM_001302216) promoter-TSS (NM_001302216) 124 NM_008065 14390 Mm.18974 NM_008065 ENSMUSG00000008976 Gabpa GABPalpha GA repeat binding protein, alpha protein-coding common_peak2_297_2766_0.037430384684022_11.452822120952_0.513147874013399 chr17 27121360 27125497 + 0.513147874013399 NA intron (NM_026063, intron 3 of 3) intron (NM_026063, intron 3 of 3) 10463 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding common_peak2_88_610_0.0779897989454579_9.29402346929146_0.513013949869994 chr3 87884508 87885791 + 0.513013949869994 NA exon (NM_033573, exon 1 of 7) exon (NM_033573, exon 1 of 7) 413 NM_033573 94315 Mm.35089 NM_033573 ENSMUSG00000004895 Prcc - papillary renal cell carcinoma (translocation-associated) protein-coding common_peak1_88_610_0.0779897989454579_9.29402346929146_0.513013949869994 chr15 73140334 73141527 + 0.513013949869994 NA intron (NM_153178, intron 2 of 18) intron (NM_153178, intron 2 of 18) 44017 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_22_108_0.170276479316584_6.85332256443522_0.512685938594866-2 chr8 122986295 122986841 + 0.512685938594866 NA intron (NR_037865, intron 1 of 13) B4|SINE|B4 55716 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding common_peak1_22_108_0.170276479316584_6.85332256443522_0.512685938594866 chr6 145139892 145140480 + 0.512685938594866 NA intron (NM_001281980, intron 3 of 18) MIRb|SINE|MIR 18447 NM_008511 16970 Mm.843 NM_008511 ENSMUSG00000030263 Lrmp D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1 lymphoid-restricted membrane protein protein-coding unique_peak2_22_108_0.170276479316584_6.85332256443522_0.512685938594866 chr13 29986310 29987119 + 0.512685938594866 NA promoter-TSS (NM_010093) promoter-TSS (NM_010093) -651 NM_010093 13557 Mm.268356 NM_010093 ENSMUSG00000016477 E2f3 E2F3b|E2f3a E2F transcription factor 3 protein-coding unique_peak2_65_477_-0.0969345491335112_8.85239953341399_0.512574223914251 chr13 49297869 49300476 + 0.512574223914251 NA intron (NM_015759, intron 1 of 17) intron (NM_015759, intron 1 of 17) 10036 NM_015759 30938 Mm.291089 NM_015759 ENSMUSG00000037946 Fgd3 5830461L01Rik|ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding common_peak2_388_4026_-0.0323717429586754_11.9593038854664_0.512182991007722 chr13 58400454 58403786 + 0.512182991007722 NA promoter-TSS (NM_001168248) promoter-TSS (NM_001168248) 49 NM_001301343 15387 Mm.142872 NM_025279 ENSMUSG00000021546 Hnrnpk Hnrpk|KBBP|NOVA heterogeneous nuclear ribonucleoprotein K protein-coding common_peak2_201_1822_-0.0486383412473224_10.8077796754155_0.511887365625419 chr7 135587575 135592755 + 0.511887365625419 NA intron (NM_001316678, intron 1 of 19) intron (NM_001316678, intron 1 of 19) -3316 NM_001316680 19267 Mm.945 NM_011212 ENSMUSG00000041836 Ptpre PTPe|PTPepsilon|RPTPepsilon protein tyrosine phosphatase, receptor type, E protein-coding common_peak1_148_1262_-0.0577139216799321_10.2737819629476_0.511698516983175 chr17 15009366 15010846 + 0.511698516983175 NA promoter-TSS (NM_198104) promoter-TSS (NM_198104) 78 NM_001123368 100041586 Mm.440445 NM_001123368 ENSMUSG00000079710 Gm3417 - predicted gene 3417 protein-coding common_peak2_230_2015_0.0435761334264342_10.9990679902131_0.511606940231238 chr12 100886813 100892450 + 0.511606940231238 NA intron (NM_175493, intron 1 of 2) intron (NM_175493, intron 1 of 2) 9893 NM_001177674 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding common_peak2_48_335_-0.115441185868075_8.33459682984472_0.511496705151748 chr1 191598543 191599989 + 0.511496705151748 NA intron (NM_178632, intron 7 of 19) intron (NM_178632, intron 7 of 19) 23630 NM_001306204 77065 Mm.338175 NM_178632 ENSMUSG00000037461 Ints7 5930412E23Rik|int7 integrator complex subunit 7 protein-coding common_peak2_48_335_-0.115441185868075_8.33459682984472_0.511496705151748-2 chr8 116904955 116906635 + 0.511496705151748 NA intron (NM_026844, intron 2 of 3) intron (NM_026844, intron 2 of 3) 15641 NM_026844 66531 Mm.4011 NM_026844 ENSMUSG00000014633 Cmc2 1110046L09Rik|2310061C15Rik|DC13 COX assembly mitochondrial protein 2 protein-coding common_peak2_30_196_-0.15536961472207_7.54436701209534_0.511282245597493 chr16 32189806 32191111 + 0.511282245597493 NA Intergenic L3|LINE|CR1 10658 NM_001033539 328660 Mm.441006 NM_001033539 ENSMUSG00000075269 Bex6 B020003O03Rik brain expressed family member 6 protein-coding common_peak1_30_196_-0.15536961472207_7.54436701209534_0.511282245597493 chr6 100670574 100671261 + 0.511282245597493 NA intron (NM_181590, intron 1 of 10) CpG 240 NM_181590 72171 Mm.256022 NM_181590 ENSMUSG00000035378 Shq1 2810403P18Rik|Grim-1 SHQ1 homolog (S. cerevisiae) protein-coding common_peak2_124_1022_-0.0644696507306257_9.96635560438002_0.51124548420393 chr2 71366256 71368259 + 0.51124548420393 NA intron (NM_172436, intron 1 of 17) intron (NM_172436, intron 1 of 17) 297 NM_172436 78830 Mm.30928 NM_172436 ENSMUSG00000027010 Slc25a12 2610002D09Rik|AI839531|B230107K20Rik|BB129864 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 protein-coding common_peak2_48_286_0.111969310234997_8.22089158179319_0.510947169746551 chr2 122368476 122369659 + 0.510947169746551 NA promoter-TSS (NM_001013829) promoter-TSS (NM_001013829) -149 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding common_peak1_48_286_0.111969310234997_8.22089158179319_0.510947169746551 chr4 59273726 59274404 + 0.510947169746551 NA Intergenic Intergenic 14014 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_231_2153_-0.044302286472572_11.0506513913079_0.510711477238877 chr1 172524823 172527264 + 0.510711477238877 NA intron (NM_027972, intron 1 of 11) L3b|LINE|CR1 4913 NM_027972 71870 Mm.78373 NM_027972 ENSMUSG00000026546 Cfap45 1700028D05Rik|Ccdc19|Nesg1 cilia and flagella associated protein 45 protein-coding common_peak1_30_159_0.144754109846944_7.39430514981083_0.510522248765638 chr15 78606910 78607535 + 0.510522248765638 NA intron (NM_028195, intron 5 of 12) (CATG)n|Simple_repeat|Simple_repeat 10175 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak1_30_159_0.144754109846944_7.39430514981083_0.510522248765638-2 chr9 75541786 75542431 + 0.510522248765638 NA intron (NM_016963, intron 1 of 9) intron (NM_016963, intron 1 of 9) 17549 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak2_30_159_0.144754109846944_7.39430514981083_0.510522248765638 chr10 44845492 44846615 + 0.510522248765638 NA Intergenic Intergenic -221161 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak2_164_1324_0.0536488902012771_10.3986010894386_0.51030513062093 chr10 80101619 80103474 + 0.51030513062093 NA intron (NM_183426, intron 1 of 31) CpG 156 NM_183426 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch homolog 2 (Drosophila) protein-coding common_peak1_159_1375_-0.0552935935122534_10.398617957946_0.51030513062093 chr14 27354476 27356818 + 0.51030513062093 NA intron (NM_001289687, intron 1 of 9) MIRb|SINE|MIR -5742 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_62_451_-0.0985698024634054_8.77089406118349_0.510256148143846 chr1 179517019 179518521 + 0.510256148143846 NA intron (NM_027188, intron 1 of 11) CpG 233 NM_027188 69726 Mm.222338 NM_027188 ENSMUSG00000055067 Smyd3 2410008A19Rik|Zmynd1 SET and MYND domain containing 3 protein-coding common_peak1_45_311_-0.120329103582383_8.22523766707106_0.510244727657367 chr3 94852323 94853473 + 0.510244727657367 NA intron (NM_001165948, intron 1 of 18) B4A|SINE|B4 15331 NM_172683 229584 Mm.274787 NM_172683 ENSMUSG00000038902 Pogz 9530006B08Rik pogo transposable element with ZNF domain protein-coding common_peak2_45_311_-0.120329103582383_8.22523766707106_0.510244727657367 chr17 50170377 50172073 + 0.510244727657367 NA intron (NM_181397, intron 1 of 9) intron (NM_181397, intron 1 of 9) 19272 NM_181397 76438 Mm.41854 NM_181397 ENSMUSG00000039316 Rftn1 2310015N21Rik|AI853526 raftlin lipid raft linker 1 protein-coding common_peak1_115_852_0.0654860055669904_9.76914493410179_0.51023234788945 chr12 71136056 71137673 + 0.51023234788945 NA promoter-TSS (NM_029818) promoter-TSS (NM_029818) 16 NM_001163378 76967 Mm.87290 NM_029818 ENSMUSG00000034601 2700049A03Rik Ta3|Talpid3|mKIAA0586 RIKEN cDNA 2700049A03 gene protein-coding common_peak1_55_392_-0.105208441054325_8.56578128173144_0.510189730375151-2 chr6 29211340 29212373 + 0.510189730375151 NA intron (NM_001302933, intron 2 of 14) intron (NM_001302933, intron 2 of 14) 441 NM_011829 23917 Mm.260707 NM_011829 ENSMUSG00000003500 Impdh1 B930086D20Rik|IMPDH-I inosine 5'-phosphate dehydrogenase 1 protein-coding common_peak1_55_392_-0.105208441054325_8.56578128173144_0.510189730375151-3 chr6 50414344 50415376 + 0.510189730375151 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -32023 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_55_392_-0.105208441054325_8.56578128173144_0.510189730375151 chr19 8735375 8736476 + 0.510189730375151 NA promoter-TSS (NM_134139) promoter-TSS (NM_134139) 86 NM_134139 107071 Mm.29627 NM_134139 ENSMUSG00000042729 Wdr74 5730436H21Rik|AA407588 WD repeat domain 74 protein-coding common_peak2_89_619_0.0766665434767493_9.31445767701261_0.510015772332536 chr8 88137474 88138925 + 0.510015772332536 NA promoter-TSS (NR_106039) promoter-TSS (NR_106039) -7 NR_106039 102465649 NR_106039 ENSMUSG00000099080 Mir7071 Gm27623|mmu-mir-7071 microRNA 7071 ncRNA common_peak1_33_218_-0.144638487440647_7.70246781588085_0.509905928742225 chr2 79262324 79263042 + 0.509905928742225 NA intron (NM_010576, intron 2 of 27) intron (NM_010576, intron 2 of 27) 7257 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak2_275_2656_-0.0397625698710016_11.355701227555_0.509897144269322 chr17 74527064 74530305 + 0.509897144269322 NA exon (NM_007566, exon 1 of 73) exon (NM_007566, exon 1 of 73) 389 NM_007566 12211 Mm.442564 NM_007566 ENSMUSG00000024073 Birc6 A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289 baculoviral IAP repeat-containing 6 protein-coding common_peak1_85_584_0.0800466669695385_9.23231614795554_0.509894966900184 chr4 125084902 125086048 + 0.509894966900184 NA intron (NM_001290701, intron 1 of 6) CpG 341 NM_001290701 70088 Mm.291214 NM_027310 ENSMUSG00000028863 Meaf6 2310005N01Rik|2810036M01Rik MYST/Esa1-associated factor 6 protein-coding common_peak1_829_10115_-0.0201275544302142_13.2942875444481_0.509856600279011 chr11 97125635 97133654 + 0.509856600279011 NA Intergenic Intergenic -14313 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding common_peak2_81_550_0.0821470676806246_9.14698204241147_0.509773854064453 chr19 6275445 6277802 + 0.509773854064453 NA promoter-TSS (NM_010119) promoter-TSS (NM_010119) -273 NM_010119 13660 Mm.30169 NM_010119 ENSMUSG00000024772 Ehd1 AA409636|Past1|RME-1 EH-domain containing 1 protein-coding common_peak1_81_550_0.0821470676806246_9.14698204241147_0.509773854064453 chr14 31205999 31207440 + 0.509773854064453 NA 5' UTR (NM_022656, exon 1 of 21) 5' UTR (NM_022656, exon 1 of 21) 107 NM_022656 64652 Mm.298728 NM_022656 ENSMUSG00000021910 Nisch 1200007D05Rik|3202002H23Rik|AW494485|I-1 nischarin protein-coding common_peak1_139_1078_0.0591911874082296_10.1050747431921_0.509711642882231 chr9 41207031 41208157 + 0.509711642882231 NA intron (NR_040392, intron 1 of 4) intron (NR_040392, intron 1 of 4) 1439 NR_040392 78500 Mm.275715 NR_040392 ENSMUSG00000100837 1700063D05Rik - RIKEN cDNA 1700063D05 gene ncRNA common_peak1_62_394_0.0959003168873167_8.67365900150812_0.509702619424505 chr4 152027127 152027716 + 0.509702619424505 NA TTS (NM_031867) TTS (NM_031867) 250 NM_133879 100090 Mm.24661 NM_133879 ENSMUSG00000028952 Zbtb48 0610011D15Rik|AI327031|Hkr3 zinc finger and BTB domain containing 48 protein-coding common_peak1_154_1225_0.0550445279218454_10.2872655276517_0.50967502927733 chr3 116661604 116662831 + 0.50967502927733 NA intron (NM_008246, intron 1 of 11) CpG 460 NM_008246 15247 Mm.280077 NM_008246 ENSMUSG00000089911 Mfsd14a Hiat1 major facilitator superfamily domain containing 14A protein-coding common_peak1_232_2164_-0.0440397487402393_11.058131435244_0.509629549484077 chr12 17690457 17693346 + 0.509629549484077 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 1087 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_42_287_-0.124197831188361_8.10782608584813_0.509567695475122 chr6 72379745 72381158 + 0.509567695475122 NA promoter-TSS (NM_001080742) promoter-TSS (NM_001080742) 17 NM_016872 53620 Mm.440321 NM_016872 ENSMUSG00000073002 Vamp5 AF119384|Camp vesicle-associated membrane protein 5 protein-coding common_peak1_42_287_-0.124197831188361_8.10782608584813_0.509567695475122 chrX 20848406 20848985 + 0.509567695475122 NA intron (NM_001159645, intron 1 of 5) CpG 152 NM_001159645 11836 Mm.220946 NM_009703 ENSMUSG00000001127 Araf 1200013E08Rik|A-Raf|AW495444|Araf1 Araf proto-oncogene, serine/threonine kinase protein-coding common_peak1_315_3129_-0.0366232283339514_11.593635327653_0.509329509335708 chr7 127088705 127091393 + 0.509329509335708 NA Intergenic B4A|SINE|B4 -1387 NM_178901 101602 Mm.490357 NM_178901 ENSMUSG00000045165 AI467606 - expressed sequence AI467606 protein-coding common_peak1_125_1032_-0.0644030677269214_9.9804230050016_0.509163811813439 chr9 21424915 21426050 + 0.509163811813439 NA intron (NM_007871, intron 1 of 19) intron (NM_007871, intron 1 of 19) 574 NM_001039520 13430 Mm.433257 NM_007871 ENSMUSG00000033335 Dnm2 Dyn2|Udnm|b2b2159Clo dynamin 2 protein-coding common_peak1_20_125_-0.199805279701419_6.87737728364921_0.509078336253415 chr13 34874099 34874495 + 0.509078336253415 NA Intergenic CpG -1197 NM_013830 19134 Mm.10027 NM_013830 ENSMUSG00000021413 Prpf4b 2610037H07|Prp4|Prp4k|Prpk|cbp143 pre-mRNA processing factor 4B protein-coding unique_peak2_20_125_-0.199805279701419_6.87737728364921_0.509078336253415 chr14 47104505 47105498 + 0.509078336253415 NA 3' UTR (NM_028966, exon 12 of 12) 3' UTR (NM_028966, exon 12 of 12) 11160 NR_126579 100038654 NR_126579 ENSMUSG00000072589 Gm10371 ENSMUSG00000072589 predicted gene 10371 ncRNA common_peak2_20_125_-0.199805279701419_6.87737728364921_0.509078336253415 chr2 127006734 127007482 + 0.509078336253415 NA Intergenic PB1D9|SINE|Alu -1603 NM_175550 108011 Mm.134045 NM_175550 ENSMUSG00000001998 Ap4e1 2310033A20Rik|9930028M04Rik|AV087807 adaptor-related protein complex AP-4, epsilon 1 protein-coding common_peak1_33_179_0.138295475830852_7.5610008342451_0.509049550584902 chr1 46894217 46894976 + 0.509049550584902 NA Intergenic ORR1D2|LTR|ERVL-MaLR -41087 NM_172653 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding unique_peak2_33_179_0.138295475830852_7.5610008342451_0.509049550584902 chr15 84680758 84681953 + 0.509049550584902 NA intron (NM_146061, intron 1 of 7) CpG 357 NM_146061 109270 Mm.291372 NM_146061 ENSMUSG00000036106 Prr5 AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1 proline rich 5 (renal) protein-coding common_peak1_36_241_-0.139079586063184_7.849323444243_0.508828433560266 chr3 65922542 65923180 + 0.508828433560266 NA Intergenic Intergenic 35364 NM_019937 56706 Mm.175612 NM_019937 ENSMUSG00000027829 Ccnl1 2610030E23Rik|AU018493|Ccnl|ania-6a cyclin L1 protein-coding common_peak1_39_264_-0.13210201063343_7.98379754413385_0.508801541599878 chr19 46715167 46716040 + 0.508801541599878 NA intron (NM_020577, intron 7 of 10) ORR1A2|LTR|ERVL-MaLR 8160 NM_020577 57344 Mm.28566 NM_020577 ENSMUSG00000003559 As3mt 2310045H08Rik|Cyt19 arsenic (+3 oxidation state) methyltransferase protein-coding common_peak2_42_242_0.12091466664817_7.98526983692987_0.508801541599878 chr10 40370863 40372718 + 0.508801541599878 NA intron (NM_001291816, intron 1 of 11) intron (NM_001291816, intron 1 of 11) 22482 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak2_107_858_-0.0710821319261559_9.71097325517539_0.5083501486523 chr14 21846652 21849027 + 0.5083501486523 NA intron (NM_026965, intron 5 of 6) CpG 1071 NM_026965 69156 Mm.11827 NM_026965 ENSMUSG00000021773 Comtd1 1810030M08Rik|MT773 catechol-O-methyltransferase domain containing 1 protein-coding common_peak1_25_160_-0.175495633473685_7.24316906137777_0.508252828103602-2 chr19 6276123 6276669 + 0.508252828103602 NA promoter-TSS (NM_010119) promoter-TSS (NM_010119) -500 NM_010119 13660 Mm.30169 NM_010119 ENSMUSG00000024772 Ehd1 AA409636|Past1|RME-1 EH-domain containing 1 protein-coding common_peak1_25_160_-0.175495633473685_7.24316906137777_0.508252828103602 chr10 14058027 14058643 + 0.508252828103602 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 91956 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_25_160_-0.175495633473685_7.24316906137777_0.508252828103602-3 chr2 155728833 155729392 + 0.508252828103602 NA intron (NM_145537, intron 1 of 10) intron (NM_145537, intron 1 of 10) 363 NM_145537 108687 Mm.273706 NM_145537 ENSMUSG00000038312 Edem2 9530090G24Rik|AI327354 ER degradation enhancer, mannosidase alpha-like 2 protein-coding unique_peak2_25_160_-0.175495633473685_7.24316906137777_0.508252828103602 chr15 27657868 27659197 + 0.508252828103602 NA intron (NM_001242424, intron 6 of 8) intron (NM_001242424, intron 6 of 8) 23010 NM_001242424 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_25_160_-0.175495633473685_7.24316906137777_0.508252828103602-4 chr9 50731598 50732138 + 0.508252828103602 NA intron (NM_001311069, intron 1 of 19) MIRb|SINE|MIR -3884 NM_178118 330938 Mm.82598 NM_178118 ENSMUSG00000032064 Dixdc1 4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735 DIX domain containing 1 protein-coding unique_peak2_25_160_-0.175495633473685_7.24316906137777_0.508252828103602-2 chr7 118282767 118283952 + 0.508252828103602 NA Intergenic Intergenic 39452 NR_027879 67745 Mm.483404 NM_183267 ENSMUSG00000055159 4930583K01Rik - RIKEN cDNA 4930583K01 gene ncRNA common_peak1_39_221_0.123330672467026_7.85608120258362_0.507930198448884 chr17 45686323 45686883 + 0.507930198448884 NA promoter-TSS (NM_198167) promoter-TSS (NM_198167) 231 NM_026732 68463 Mm.379158 NM_026732 ENSMUSG00000023939 Mrpl14 1110006I11Rik|AI846816|MRP-L32|Rpml32 mitochondrial ribosomal protein L14 protein-coding common_peak2_36_200_0.128731960032482_7.71541767119517_0.507915121099517 chr8 94453392 94455134 + 0.507915121099517 NA Intergenic Lx9|LINE|L1 -18500 NM_001033207 434341 Mm.334720 NM_001033207 ENSMUSG00000074151 Nlrc5 AI451557|AK220210|NOD27 NLR family, CARD domain containing 5 protein-coding unique_peak2_36_200_0.128731960032482_7.71541767119517_0.507915121099517 chr11 75251828 75253517 + 0.507915121099517 NA intron (NM_177708, intron 1 of 1) intron (NM_177708, intron 1 of 1) 58679 NM_177708 237847 Mm.82661 NM_177708 ENSMUSG00000045287 Rtn4rl1 Ngr3|Ngrh2|Ngrl2 reticulon 4 receptor-like 1 protein-coding common_peak1_70_520_-0.0919800164314903_8.97914955406276_0.507879689124554 chr15 96638555 96639591 + 0.507879689124554 NA intron (NM_001166458, intron 1 of 15) intron (NM_001166458, intron 1 of 15) 2889 NM_134086 105727 Mm.103568 NM_134086 ENSMUSG00000023169 Slc38a1 AA408026|AA409865|AL022800|AU015942|NAT2 solute carrier family 38, member 1 protein-coding unique_peak2_20_96_0.17756180161137_6.68869374299281_0.507795445601793 chr5 135794191 135794792 + 0.507795445601793 NA Intergenic Intergenic 15842 NM_008617 17448 Mm.297096 NM_008617 ENSMUSG00000019179 Mdh2 MDH|Mdh-2|Mor-1|Mor1 malate dehydrogenase 2, NAD (mitochondrial) protein-coding common_peak1_20_96_0.17756180161137_6.68869374299281_0.507795445601793 chr19 10817865 10818370 + 0.507795445601793 NA intron (NM_009852, intron 1 of 12) intron (NM_009852, intron 1 of 12) 11941 NM_001037801 12511 Mm.290897 NM_009852 ENSMUSG00000024670 Cd6 - CD6 antigen protein-coding common_peak1_94_663_0.0734303589282863_9.41175461081107_0.507678749046268 chr9 70207112 70208558 + 0.507678749046268 NA intron (NM_181072, intron 1 of 27) intron (NM_181072, intron 1 of 27) 485 NM_181072 71602 Mm.249311 NM_181072 ENSMUSG00000032220 Myo1e 2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3 myosin IE protein-coding common_peak1_199_1799_-0.0479290655215845_10.7898166584562_0.507390448790198 chr4 46535329 46536836 + 0.507390448790198 NA promoter-TSS (NM_029077) promoter-TSS (NM_029077) 59 NM_029077 74735 Mm.240252 NM_029077 ENSMUSG00000039853 Trim14 5830400N10Rik|pub tripartite motif-containing 14 protein-coding common_peak2_78_590_-0.0849152290642152_9.16455670564542_0.507225270127874 chr19 43523227 43525497 + 0.507225270127874 NA exon (NM_010324, exon 1 of 9) exon (NM_010324, exon 1 of 9) 243 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak1_177_1563_-0.0513941173568089_10.5853277386289_0.507160844463737 chr13 98316169 98317712 + 0.507160844463737 NA promoter-TSS (NM_001170540) promoter-TSS (NM_001170540) 27 NM_145455 218490 Mm.371688 NM_145455 ENSMUSG00000021660 Btf3 1700054E11Rik basic transcription factor 3 protein-coding common_peak2_177_1563_-0.0513941173568089_10.5853277386289_0.507160844463737 chr9 65020546 65023280 + 0.507160844463737 NA promoter-TSS (NM_021345) promoter-TSS (NM_021345) -196 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak1_82_626_-0.0828157636336915_9.25091375098519_0.507150538519134 chr1 52113102 52113960 + 0.507150538519134 NA Intergenic Intergenic -5907 NM_009283 20846 Mm.277406 NM_009283 ENSMUSG00000026104 Stat1 2010005J02Rik|AA408197 signal transducer and activator of transcription 1 protein-coding common_peak1_126_1042_-0.0643127483457206_9.99436706834691_0.507122966122053 chr7 84689022 84690022 + 0.507122966122053 NA promoter-TSS (NR_038175) promoter-TSS (NR_038175) -118 NR_038175 72495 Mm.382914 NR_038175 ENSMUSG00000085236 2610206C17Rik - RIKEN cDNA 2610206C17 gene ncRNA common_peak1_25_127_0.155421244640932_7.07771062232047_0.507038420922556-2 chr19 40667134 40667688 + 0.507038420922556 NA intron (NM_009848, intron 1 of 9) L1MB8|LINE|L1 7641 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak1_25_127_0.155421244640932_7.07771062232047_0.507038420922556-3 chr4 137861726 137862102 + 0.507038420922556 NA promoter-TSS (NM_199307) promoter-TSS (NM_199307) -323 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding common_peak1_25_127_0.155421244640932_7.07771062232047_0.507038420922556 chr15 75929248 75929899 + 0.507038420922556 NA intron (NM_031201, intron 1 of 10) CpG 157 NM_031201 22122 Mm.22596 NM_031201 ENSMUSG00000022570 Tsta3 AI256181|FX|Tstap35b tissue specific transplantation antigen P35B protein-coding common_peak2_259_2335_0.0403145838255909_11.2099818507928_0.506815612752552 chr7 127275709 127281942 + 0.506815612752552 NA Intergenic Intergenic -4766 NM_009266 20768 Mm.20294 NM_009266 ENSMUSG00000049091 Sephs2 Sps2|Ysg3 selenophosphate synthetase 2 protein-coding common_peak1_74_492_0.0847058719117548_8.98779677233379_0.506656550760359 chr17 56183331 56184352 + 0.506656550760359 NA promoter-TSS (NM_080837) promoter-TSS (NM_080837) 79 NM_080837 28106 Mm.294870 NM_080837 ENSMUSG00000019579 Mydgf D17Wsu104e|Il25|Ly6elg myeloid derived growth factor protein-coding common_peak1_49_343_-0.113637251379357_8.36944612901242_0.506399739267503 chr4 156197566 156198375 + 0.506399739267503 NA promoter-TSS (NM_021604) promoter-TSS (NM_021604) -482 NM_021604 11603 Mm.273098 NM_021604 ENSMUSG00000041936 Agrn Agrin|nmf380 agrin protein-coding common_peak2_151_1196_0.0549937000124547_10.2527042869497_0.506087174910206 chr16 91009941 91012124 + 0.506087174910206 NA promoter-TSS (NR_028368) promoter-TSS (NR_028368) 63 NM_001045515 104015 Mm.187079 NM_001045515 ENSMUSG00000022973 Synj1 A930006D20Rik|AA675315|mKIAA0910 synaptojanin 1 protein-coding common_peak2_254_2413_-0.0414335967492452_11.2164931623804_0.505864239896055 chr4 95050050 95053826 + 0.505864239896055 NA 5' UTR (NM_010591, exon 1 of 1) 5' UTR (NM_010591, exon 1 of 1) 284 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_56_400_-0.102959706904747_8.59597857300255_0.505858640881401 chr4 6681305 6683200 + 0.505858640881401 NA Intergenic Intergenic -227981 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding unique_peak2_18_111_-0.206990718660713_6.70385956272725_0.505804290662409 chr16 91533286 91534040 + 0.505804290662409 NA Intergenic Intergenic -13431 NM_008338 15980 Mm.249364 NM_008338 ENSMUSG00000022965 Ifngr2 Ifgr2|Ifgt interferon gamma receptor 2 protein-coding common_peak1_18_111_-0.206990718660713_6.70385956272725_0.505804290662409 chr12 111813509 111813875 + 0.505804290662409 NA promoter-TSS (NM_026752) promoter-TSS (NM_026752) 187 NM_028875 74335 Mm.19082 NM_028875 ENSMUSG00000021287 Xrcc3 - X-ray repair complementing defective repair in Chinese hamster cells 3 protein-coding common_peak1_18_111_-0.206990718660713_6.70385956272725_0.505804290662409-2 chr17 45685788 45686210 + 0.505804290662409 NA promoter-TSS (NM_026732) promoter-TSS (NM_026732) 219 NM_198167 224807 Mm.157904 NM_198167 ENSMUSG00000036026 Tmem63b BC026370 transmembrane protein 63b protein-coding common_peak1_18_111_-0.206990718660713_6.70385956272725_0.505804290662409-3 chr7 90311613 90312047 + 0.505804290662409 NA intron (NM_001289583, intron 1 of 19) ORR1A2|LTR|ERVL-MaLR 9475 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding unique_peak2_18_111_-0.206990718660713_6.70385956272725_0.505804290662409-2 chr19 5742875 5743741 + 0.505804290662409 NA intron (NM_008520, intron 2 of 27) intron (NM_008520, intron 2 of 27) 2404 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding common_peak2_63_402_0.0948418569699125_8.70205695701292_0.505688153392917 chr11 57685422 57687059 + 0.505688153392917 NA intron (NM_134189, intron 1 of 11) intron (NM_134189, intron 1 of 11) 40798 NM_134189 171212 Mm.271670 NM_134189 ENSMUSG00000020520 Galnt10 AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 protein-coding common_peak2_95_745_-0.0760317297904294_9.50501595536002_0.505645762238447 chr6 90739961 90742422 + 0.505645762238447 NA intron (NM_001134384, intron 1 of 13) intron (NM_001134384, intron 1 of 13) -24662 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak2_212_1941_-0.0460334234188906_10.9003107737097_0.505572690480184 chr6 21948934 21951227 + 0.505572690480184 NA exon (NM_023626, exon 2 of 12) exon (NM_023626, exon 2 of 12) 465 NM_023626 71777 Mm.39999 NM_023626 ENSMUSG00000029670 Ing3 1300013A07Rik|P47ING3 inhibitor of growth family, member 3 protein-coding common_peak2_49_294_0.108056359073537_8.25859932378597_0.505456285160835 chr5 31054088 31055559 + 0.505456285160835 NA promoter-TSS (NM_023525) promoter-TSS (NM_023525) 43 NM_001289522 69719 Mm.305535 NM_023525 ENSMUSG00000013629 Cad 2410008J01Rik|AU018859|Cpad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase protein-coding common_peak1_49_294_0.108056359073537_8.25859932378597_0.505456285160835 chr14 57423490 57424306 + 0.505456285160835 NA promoter-TSS (NM_009376) promoter-TSS (NM_009376) -173 NM_009376 21821 Mm.4653 NM_009376 ENSMUSG00000040040 Ift88 AW552028|Tg737|Tg737Rpw|TgN737Rpw|Ttc10|flexo|fxo|orpk|polaris intraflagellar transport 88 protein-coding common_peak1_162_1305_0.0529052623749386_10.3773918127339_0.5051277683025 chr7 75655046 75656627 + 0.5051277683025 NA intron (NM_029332, intron 8 of 36) L1M4|LINE|L1 -192502 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_95_672_0.072537395854491_9.43073139253756_0.504982714779138 chr6 56901415 56902631 + 0.504982714779138 NA promoter-TSS (NM_001252374) promoter-TSS (NM_001252374) -137 NM_001252374 107569 Mm.158936 NM_026004 ENSMUSG00000029780 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III protein-coding common_peak2_95_672_0.072537395854491_9.43073139253756_0.504982714779138 chr12 24497836 24499377 + 0.504982714779138 NA promoter-TSS (NR_028341) promoter-TSS (NR_028341) 25 NR_028341 21340 Mm.39082 NM_020614 ENSMUSG00000059669 Taf1b 4930408G01Rik|A230108M10Rik|TAFI68|Tafi86|p63 TATA-box binding protein associated factor, RNA polymerase I, B protein-coding common_peak2_56_347_0.101555223701444_8.49372110769945_0.504951460290855 chr8 33652745 33654215 + 0.504951460290855 NA 5' UTR (NM_010344, exon 1 of 13) 5' UTR (NM_010344, exon 1 of 13) 242 NM_010344 14782 Mm.283573 NM_010344 ENSMUSG00000031584 Gsr AI325518|D8Ertd238e|Gr-1|Gr1 glutathione reductase protein-coding common_peak2_46_319_-0.118797007461344_8.26252959115669_0.504790061470383 chr15 27465837 27467511 + 0.504790061470383 NA promoter-TSS (NM_020332) promoter-TSS (NM_020332) -3 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_46_319_-0.118797007461344_8.26252959115669_0.504790061470383-2 chr9 103133402 103134813 + 0.504790061470383 NA intron (NM_173781, intron 1 of 7) intron (NM_173781, intron 1 of 7) 22033 NM_173781 270192 Mm.490252 NM_173781 ENSMUSG00000032549 Rab6b 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e RAB6B, member RAS oncogene family protein-coding common_peak1_168_1468_-0.0528048320268706_10.4942162645428_0.504635390333502 chr10 93170757 93172940 + 0.504635390333502 NA intron (NM_146239, intron 1 of 16) intron (NM_146239, intron 1 of 16) 9063 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak1_104_752_0.0690741760048912_9.59104314267437_0.504397285451968 chr11 49063637 49064914 + 0.504397285451968 NA promoter-TSS (NM_001145164) promoter-TSS (NM_001145164) -63 NM_001145164 100039796 Mm.482363 NM_001145164 ENSMUSG00000078921 Tgtp2 OTTMUSG00000005537|TGTP T cell specific GTPase 2 protein-coding common_peak1_104_752_0.0690741760048912_9.59104314267437_0.504397285451968-2 chr3 21952899 21953957 + 0.504397285451968 NA Intergenic Intergenic -123224 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_179_1584_-0.0508638650894255_10.6048351924821_0.504380378967644 chr4 134547273 134548999 + 0.504380378967644 NA intron (NM_029100, intron 2 of 11) intron (NM_029100, intron 2 of 11) 4030 NM_029100 74777 Mm.29773 NM_029100 ENSMUSG00000050989 Selenon 1110019I12Rik|AI414492|SelN|Sepn1 selenoprotein N protein-coding common_peak2_118_963_-0.0658169659903169_9.8799808532348_0.504363046107916 chr6 134065865 134069033 + 0.504363046107916 NA intron (NM_001303102, intron 2 of 8) MTD|LTR|ERVL-MaLR 31749 NM_007961 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak1_75_563_-0.0859625266291904_9.0965700890842_0.504311982458632 chr15 66864661 66865919 + 0.504311982458632 NA Intergenic Intergenic -26103 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak1_28_146_0.148990969676204_7.27416782967447_0.504224975933174-2 chr6 71962638 71963305 + 0.504224975933174 NA intron (NM_009088, intron 21 of 33) L2|LINE|L2 53918 NM_009088 20019 Mm.135581 NM_009088 ENSMUSG00000049553 Polr1a 194kDa|3010014K16Rik|RPA194|Rpo1-4|mRPA1 polymerase (RNA) I polypeptide A protein-coding common_peak1_28_146_0.148990969676204_7.27416782967447_0.504224975933174 chr11 62675377 62675993 + 0.504224975933174 NA Intergenic Intergenic 27021 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding common_peak2_137_1060_0.0579986905183851_10.080208286174_0.504150009670056 chr3 35762243 35766519 + 0.504150009670056 NA intron (NM_029570, intron 1 of 29) intron (NM_029570, intron 1 of 29) 10243 NM_029570 76295 Mm.239416 NM_029570 ENSMUSG00000037400 Atp11b 1110019I14Rik|ATPIF|ATPIR|mKIAA0956 ATPase, class VI, type 11B protein-coding common_peak1_83_635_-0.082183689113144_9.27179111072778_0.504148019938244-2 chr11 116254770 116255757 + 0.504148019938244 NA intron (NM_146032, intron 8 of 15) intron (NM_146032, intron 8 of 15) -17172 NM_025276 14027 Mm.293683 NM_025276 ENSMUSG00000034282 Evpl - envoplakin protein-coding common_peak1_83_635_-0.082183689113144_9.27179111072778_0.504148019938244 chr1 180365233 180366509 + 0.504148019938244 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -35322 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_168_1365_0.05207208023932_10.4417778084097_0.504133784175583 chr18 75376314 75378304 + 0.504133784175583 NA intron (NM_001042660, intron 3 of 3) intron (NM_001042660, intron 3 of 3) 9944 NM_001042660 17131 Mm.34407 NM_008543 ENSMUSG00000025880 Smad7 Madh7 SMAD family member 7 protein-coding common_peak2_23_145_-0.176049090787923_7.10180001348606_0.504027547483 chr17 72965921 72967328 + 0.504027547483 NA Intergenic Intergenic 48319 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak1_23_145_-0.176049090787923_7.10180001348606_0.504027547483 chr13 113095383 113095829 + 0.504027547483 NA intron (NM_010370, intron 4 of 4) (CCAA)n|Simple_repeat|Simple_repeat 5375 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak1_109_876_-0.0685297028724605_9.7421681810085_0.503989810634601 chr5 140608550 140609717 + 0.503989810634601 NA intron (NM_008494, intron 1 of 7) intron (NM_008494, intron 1 of 7) 1792 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_213_1833_0.0448048069470754_10.8631803270686_0.503961849120938 chr1 166000612 166002568 + 0.503961849120938 NA intron (NM_011137, intron 1 of 16) CpG 1044 NM_198932 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding common_peak1_18_84_0.190973267259189_6.5048775697673_0.503955412545943 chr17 87458998 87459522 + 0.503955412545943 NA Intergenic Intergenic -12325 NM_007589 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017 calmodulin 2 protein-coding unique_peak2_18_84_0.190973267259189_6.5048775697673_0.503955412545943 chr2 143862427 143863191 + 0.503955412545943 NA exon (NM_009751, exon 1 of 8) exon (NM_009751, exon 1 of 8) 364 NM_009751 12075 Mm.275937 NM_009751 ENSMUSG00000027420 Bfsp1 CP95 beaded filament structural protein 1, in lens-CP94 protein-coding common_peak1_18_84_0.190973267259189_6.5048775697673_0.503955412545943-2 chr6 140338154 140338597 + 0.503955412545943 NA Intergenic Intergenic -85724 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding unique_peak2_43_295_-0.123043311748642_8.14793170975463_0.503679755723496 chr15 51736002 51737928 + 0.503679755723496 NA Intergenic Intergenic 128496 NM_080635 68135 Mm.289800 NM_080635 ENSMUSG00000022312 Eif3h 1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3 eukaryotic translation initiation factor 3, subunit H protein-coding common_peak1_163_1315_0.0527241137028973_10.3883058305867_0.50360447317367 chr2 44926183 44927339 + 0.50360447317367 NA Intergenic CpG -65139 NM_172662 227835 Mm.314312 NM_172662 ENSMUSG00000036890 Gtdc1 E330008O22Rik glycosyltransferase-like domain containing 1 protein-coding common_peak2_79_534_0.0809637687149785_9.103876965646_0.503202857806843 chr4 152026885 152028518 + 0.503202857806843 NA promoter-TSS (NM_133879) promoter-TSS (NM_133879) -30 NM_133879 100090 Mm.24661 NM_133879 ENSMUSG00000028952 Zbtb48 0610011D15Rik|AI327031|Hkr3 zinc finger and BTB domain containing 48 protein-coding unique_peak2_34_225_-0.138733247891654_7.75081233846936_0.503100323440033 chr15 61447578 61449722 + 0.503100323440033 NA Intergenic Intergenic 325801 NR_040350 432956 Mm.404918 NR_040350 D030024E09Rik - RIKEN cDNA D030024E09 gene ncRNA common_peak1_34_225_-0.138733247891654_7.75081233846936_0.503100323440033 chr1 13639364 13639993 + 0.503100323440033 NA intron (NM_145381, intron 3 of 6) intron (NM_145381, intron 3 of 6) 20831 NM_145381 212442 Mm.89572 NM_145381 ENSMUSG00000025937 Lactb2 Cgi-83|E430032H21Rik lactamase, beta 2 protein-coding common_peak1_114_924_-0.0667431644318448_9.81993797318775_0.503053149245399 chr8 69808037 69809266 + 0.503053149245399 NA promoter-TSS (NM_198101) promoter-TSS (NM_198101) -36 NM_198101 78816 Mm.324305 NM_198101 ENSMUSG00000036246 Gmip 5031419I10Rik Gem-interacting protein protein-coding common_peak2_105_838_-0.0701729238103557_9.67744053853465_0.502808984303983 chr10 81292776 81294082 + 0.502808984303983 NA intron (NM_001293646, intron 1 of 18) CpG 466 NM_001146687 18717 Mm.24222 NM_008844 ENSMUSG00000034902 Pip5k1c AI115456|AI835305|Pip5kIgamma phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma protein-coding common_peak1_60_379_0.0946638427160256_8.61718752968896_0.502726257106346 chr19 60811570 60812333 + 0.502726257106346 NA intron (NM_026437, intron 1 of 8) intron (NM_026437, intron 1 of 8) 381 NM_001167829 67894 Mm.26148 NM_026437 ENSMUSG00000024993 Fam45a 1810055E12Rik family with sequence similarity 45, member A protein-coding common_peak2_37_248_-0.133025417484834_7.89348922332566_0.502699791983919-2 chr7 142284122 142285030 + 0.502699791983919 NA Intergenic ERVB4_1-I_MM-int|LTR|ERVK -10213 NM_001199309 100043627 Mm.388589 NM_001199309 ENSMUSG00000056885 Gm4559 - predicted gene 4559 protein-coding common_peak2_37_248_-0.133025417484834_7.89348922332566_0.502699791983919 chr5 72810531 72812051 + 0.502699791983919 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) 57157 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak2_96_681_0.0717104343392361_9.44948314619379_0.502356129620723 chr17 84226425 84228204 + 0.502356129620723 NA intron (NM_183021, intron 34 of 37) intron (NM_183021, intron 34 of 37) -39367 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_92_717_-0.0770233129354612_9.44932837735532_0.502356129620723 chr16 38395138 38397451 + 0.502356129620723 NA 3' UTR (NM_134102, exon 11 of 11) 3' UTR (NM_134102, exon 11 of 11) 34104 NM_022318 64082 Mm.390856 NM_022318 ENSMUSG00000022803 Popdc2 AV006127|Pop2 popeye domain containing 2 protein-coding common_peak2_114_843_0.0654672022646441_9.75383278983951_0.502343258862881 chr13 81657111 81658691 + 0.502343258862881 NA promoter-TSS (NM_030257) promoter-TSS (NM_030257) 95 NM_030257 80289 Mm.259969 NM_030257 ENSMUSG00000035840 Lysmd3 1110030H10Rik|BC003322 LysM, putative peptidoglycan-binding, domain containing 3 protein-coding common_peak1_23_114_0.16828541714772_6.92963275951823_0.502220138582521 chr13 43785210 43785743 + 0.502220138582521 NA intron (NM_001289915, intron 2 of 4) intron (NM_001289915, intron 2 of 4) 364 NM_001289915 12522 Mm.57175 NM_009856 ENSMUSG00000015396 Cd83 - CD83 antigen protein-coding common_peak1_23_114_0.16828541714772_6.92963275951823_0.502220138582521-3 chr5 65476016 65476494 + 0.502220138582521 NA intron (NM_133697, intron 1 of 4) intron (NM_133697, intron 1 of 4) 16580 NM_133697 68552 Mm.10709 NM_133697 ENSMUSG00000037822 Smim14 1110003E01Rik|1700127H04Rik|5430439C17Rik|MAd4 small integral membrane protein 14 protein-coding unique_peak2_23_114_0.16828541714772_6.92963275951823_0.502220138582521 chr17 45766644 45767619 + 0.502220138582521 NA Intergenic Intergenic -33287 NM_028164 72240 Mm.482897 NM_028164 ENSMUSG00000094690 1600014C23Rik - RIKEN cDNA 1600014C23 gene protein-coding common_peak1_23_114_0.16828541714772_6.92963275951823_0.502220138582521-2 chr14 36863794 36864362 + 0.502220138582521 NA Intergenic Intergenic 71490 NM_028407 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding unique_peak2_23_114_0.16828541714772_6.92963275951823_0.502220138582521-2 chr6 147099015 147100132 + 0.502220138582521 NA intron (NM_001081237, intron 1 of 2) intron (NM_001081237, intron 1 of 2) 8498 NM_001081237 232539 Mm.491206 NM_001081237 ENSMUSG00000040102 Klhl42 A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340 kelch-like 42 protein-coding unique_peak2_31_166_0.139161281837472_7.45328493339279_0.502135003864803 chr2 65803484 65804431 + 0.502135003864803 NA Intergenic Intergenic -41810 NM_001290666 77771 Mm.102025 NM_153409 ENSMUSG00000044647 Csrnp3 A330102K23Rik|CSRNP-3|Csnrp3|Mbu1|taip-2 cysteine-serine-rich nuclear protein 3 protein-coding common_peak1_31_166_0.139161281837472_7.45328493339279_0.502135003864803 chr17 84335955 84336723 + 0.502135003864803 NA intron (NM_183021, intron 27 of 37) RSINE1|SINE|B4 129869 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak2_227_2107_-0.043935809714327_11.0196912467801_0.502076483607936 chr5 24423038 24426056 + 0.502076483607936 NA promoter-TSS (NM_009207) promoter-TSS (NM_009207) -685 NM_009207 20535 Mm.4580 NM_009207 ENSMUSG00000028962 Slc4a2 Ae2|B3RP solute carrier family 4 (anion exchanger), member 2 protein-coding common_peak1_290_2687_0.0371554567379331_11.4108951511477_0.502071366403945 chr15 36639951 36642516 + 0.502071366403945 NA Intergenic Intergenic -32260 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak1_186_1549_0.048865173940424_10.6224850871318_0.501928578421135 chr2 36135715 36137319 + 0.501928578421135 NA non-coding (NR_027515, exon 1 of 6) non-coding (NR_027515, exon 1 of 6) 119 NM_026422 67871 Mm.378232 NM_026422 ENSMUSG00000026887 Mrrf 2400002D02Rik|MRFF|MTRRF|RRF mitochondrial ribosome recycling factor protein-coding common_peak2_277_2539_0.0379843103194286_11.3296049368192_0.501898265105968 chr10 81137479 81141761 + 0.501898265105968 NA intron (NM_010731, intron 1 of 2) intron (NM_010731, intron 1 of 2) 3349 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding unique_peak2_40_228_0.122239476968482_7.90032352658118_0.501853668190337 chr13 112396169 112398224 + 0.501853668190337 NA Intergenic Intergenic -66874 NM_010560 16195 Mm.4364 NM_010560 ENSMUSG00000021756 Il6st 5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130 interleukin 6 signal transducer protein-coding unique_peak2_16_98_-0.225820359105438_6.51644644052689_0.501733885083345 chr16 56064045 56064678 + 0.501733885083345 NA Intergenic RMER15|LTR|ERVL -11043 NM_025483 66315 Mm.255784 NM_025483 ENSMUSG00000052917 Senp7 2410152H17Rik|2810413I22Rik|2900036C23Rik|6030449K19Rik|AI790676 SUMO1/sentrin specific peptidase 7 protein-coding unique_peak2_16_98_-0.225820359105438_6.51644644052689_0.501733885083345-3 chr16 96145431 96146051 + 0.501733885083345 NA intron (NM_207301, intron 1 of 4) CpG 322 NM_207301 71446 Mm.255063 NM_207301 ENSMUSG00000023147 Wrb 5530402J05Rik|C030018G21Rik|Chd5 tryptophan rich basic protein protein-coding unique_peak2_16_98_-0.225820359105438_6.51644644052689_0.501733885083345-2 chr16 95984833 95985770 + 0.501733885083345 NA intron (NM_019537, intron 4 of 6) ORR1E|LTR|ERVL-MaLR 5602 NM_019537 56088 Mm.396248 NM_019537 ENSMUSG00000022913 Psmg1 AW552102|Dscr2 proteasome (prosome, macropain) assembly chaperone 1 protein-coding unique_peak2_16_98_-0.225820359105438_6.51644644052689_0.501733885083345-5 chr7 128069358 128070134 + 0.501733885083345 NA intron (NM_001082960, intron 3 of 29) B4A|SINE|B4 7106 NM_008401 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak1_16_98_-0.225820359105438_6.51644644052689_0.501733885083345 chr5 74522953 74523335 + 0.501733885083345 NA intron (NM_001286437, intron 1 of 7) B2_Mm2|SINE|B2 8598 NM_178672 212986 Mm.134147 NM_178672 ENSMUSG00000062110 Scfd2 E430013M20Rik|STXBP1L1 Sec1 family domain containing 2 protein-coding unique_peak2_16_98_-0.225820359105438_6.51644644052689_0.501733885083345-4 chr2 122440629 122441441 + 0.501733885083345 NA intron (NM_172980, intron 2 of 18) MT2A|LTR|ERVL 14558 NM_172980 269346 Mm.29510 NM_172980 ENSMUSG00000027219 Slc28a2 2010208B10Rik|B430217P18|BB152493|Cnt2 solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 protein-coding common_peak1_34_186_0.134551254635897_7.61417008720558_0.50159529945878-2 chr4 40837750 40838387 + 0.50159529945878 NA intron (NM_022305, intron 1 of 5) intron (NM_022305, intron 1 of 5) 12070 NR_039584 100628614 NR_039584 ENSMUSG00000096377 Mir5123 mmu-mir-5123|mu-mir-5123 microRNA 5123 ncRNA common_peak1_34_186_0.134551254635897_7.61417008720558_0.50159529945878 chr11 32547590 32548388 + 0.50159529945878 NA intron (NM_009288, intron 1 of 18) MIR|SINE|MIR 14723 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak2_34_186_0.134551254635897_7.61417008720558_0.50159529945878-2 chr4 135149240 135150572 + 0.50159529945878 NA intron (NM_019732, intron 1 of 5) intron (NM_019732, intron 1 of 5) 29261 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_34_186_0.134551254635897_7.61417008720558_0.50159529945878 chr18 34373583 34374365 + 0.50159529945878 NA promoter-TSS (NM_007874) promoter-TSS (NM_007874) -559 NM_007874 13476 Mm.280075 NM_007874 ENSMUSG00000005873 Reep5 AI324241|AU022809|AW495741|DP1/TB2|Dp1|R74856|TB2/DP1 receptor accessory protein 5 protein-coding common_peak2_34_186_0.134551254635897_7.61417008720558_0.50159529945878-3 chr5 74039114 74040090 + 0.50159529945878 NA intron (NM_177561, intron 1 of 8) intron (NM_177561, intron 1 of 8) 28809 NM_177561 69727 Mm.48795 NM_177561 ENSMUSG00000054814 Usp46 1190009E20Rik|2410018I08Rik|AI451644 ubiquitin specific peptidase 46 protein-coding common_peak2_34_186_0.134551254635897_7.61417008720558_0.50159529945878-4 chr7 45742768 45743582 + 0.50159529945878 NA intron (NM_017465, intron 1 of 6) intron (NM_017465, intron 1 of 6) 16380 NM_017465 54200 Mm.271634 NM_017465 ENSMUSG00000003271 Sult2b1 AI326997|BB173635|ST2B1|SULT2B sulfotransferase family, cytosolic, 2B, member 1 protein-coding common_peak1_129_1071_-0.0625623589385196_10.0348080109885_0.501424600902176 chr9 120933305 120934930 + 0.501424600902176 NA intron (NM_007614, intron 1 of 14) CpG 539 NM_001165902 12387 Mm.291928 NM_007614 ENSMUSG00000006932 Ctnnb1 Bfc|Catnb|Mesc catenin (cadherin associated protein), beta 1 protein-coding common_peak1_311_2930_0.0356031304773889_11.5349788179282_0.501422498784673 chr17 6826540 6829001 + 0.501422498784673 NA Intergenic Intergenic -44990 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak1_64_411_0.0904139931496779_8.73170752375806_0.501352630254821 chr15 10485391 10486006 + 0.501352630254821 NA promoter-TSS (NM_001289447) promoter-TSS (NM_001289447) 239 NM_026396 67832 Mm.28057 NM_026396 ENSMUSG00000022247 Brix1 1110064N10Rik|Bxdc2|C76935 BRX1, biogenesis of ribosomes protein-coding common_peak2_64_411_0.0904139931496779_8.73170752375806_0.501352630254821 chr15 78934431 78935752 + 0.501352630254821 NA intron (NM_133800, intron 1 of 5) CpG 158 NM_133800 97961 Mm.157216 NM_133800 ENSMUSG00000033099 Nol12 C78541|Nop25 nucleolar protein 12 protein-coding common_peak1_139_1170_-0.0588550236049699_10.1640978486987_0.50134139910449 chr8 122285102 122286995 + 0.50134139910449 NA intron (NM_009569, intron 1 of 9) intron (NM_009569, intron 1 of 9) 3907 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_37_207_0.126536796442155_7.76370811636217_0.501236597823061 chr12 108054103 108055361 + 0.501236597823061 NA Intergenic Intergenic -51318 NM_021399 58208 Mm.392694 NM_021399 ENSMUSG00000048251 Bcl11b 9130430L19Rik|AI604821|B630002E05Rik|BCL-11B|Ctip2|Rit1 B cell leukemia/lymphoma 11B protein-coding common_peak2_129_984_0.0595469171755134_9.9737533729315_0.500699736726951 chr5 137305833 137308506 + 0.500699736726951 NA 5' UTR (NM_031405, exon 2 of 20) 5' UTR (NM_031405, exon 2 of 20) 505 NM_031405 83701 Mm.387734 NM_031405 ENSMUSG00000037364 Srrt 2810019G02Rik|ASR2A|ASR2B|ASR2C|ASR2D|Ars2|Asr2 serrate RNA effector molecule homolog (Arabidopsis) protein-coding common_peak2_68_443_0.0881794538966894_8.83850559329845_0.500649029515811 chr3 107278355 107279732 + 0.500649029515811 NA exon (NM_026774, exon 1 of 4) exon (NM_026774, exon 1 of 4) 185 NM_026774 68576 Mm.290035 NM_026774 ENSMUSG00000087260 Lamtor5 1110003H18Rik|Hbxip|XIP late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 protein-coding common_peak1_68_443_0.0881794538966894_8.83850559329845_0.500649029515811-2 chr9 110709888 110710643 + 0.500649029515811 NA intron (NM_028312, intron 5 of 6) intron (NM_028312, intron 5 of 6) 32345 NM_001083936 19228 Mm.3542 NM_011199 ENSMUSG00000032492 Pth1r PPR|Pthr|Pthr1 parathyroid hormone 1 receptor protein-coding common_peak1_68_443_0.0881794538966894_8.83850559329845_0.500649029515811 chr9 21546896 21547936 + 0.500649029515811 NA intron (NM_153141, intron 1 of 14) CpG 522 NM_153141 59035 Mm.178115 NM_021531 ENSMUSG00000032185 Carm1 Prmt4 coactivator-associated arginine methyltransferase 1 protein-coding common_peak2_26_166_-0.161496725634457_7.30295592965682_0.500350794171882 chr8 77483369 77484330 + 0.500350794171882 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -33207 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA unique_peak2_26_166_-0.161496725634457_7.30295592965682_0.500350794171882 chr1 54827219 54827993 + 0.500350794171882 NA intron (NM_001081433, intron 2 of 27) intron (NM_001081433, intron 2 of 27) 98781 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_26_166_-0.161496725634457_7.30295592965682_0.500350794171882-2 chr6 51533658 51534247 + 0.500350794171882 NA intron (NM_001127349, intron 1 of 6) intron (NM_001127349, intron 1 of 6) 10049 NM_001127349 71982 Mm.294166 NM_028035 ENSMUSG00000038301 Snx10 2410004M09Rik sorting nexin 10 protein-coding common_peak1_26_166_-0.161496725634457_7.30295592965682_0.500350794171882 chr10 81383799 81384320 + 0.500350794171882 NA promoter-TSS (NM_133964) promoter-TSS (NM_133964) -369 NM_133964 102115 Mm.294975 NM_133964 ENSMUSG00000078440 Dohh 1110033C18Rik|AI585913|AL022869|Hlrc1 deoxyhypusine hydroxylase/monooxygenase protein-coding common_peak1_47_326_-0.112759046219631_8.29676730238827_0.50024540089279 chr3 87919148 87919888 + 0.50024540089279 NA promoter-TSS (NM_026591) promoter-TSS (NM_026591) -26 NM_026591 67707 Mm.393802 NM_026591 ENSMUSG00000019710 Mrpl24 2010005E08Rik|2810470K06Rik|6720473G22Rik|AA407670 mitochondrial ribosomal protein L24 protein-coding common_peak1_50_302_0.104496793654505_8.2954223803002_0.500245400892692 chr6 85333031 85333508 + 0.500245400892692 NA intron (NM_178639, intron 1 of 13) CpG 153 NM_178639 94282 Mm.121485 NM_178639 ENSMUSG00000033720 Sfxn5 C230001H08Rik sideroflexin 5 protein-coding unique_peak2_50_302_0.104496793654505_8.2954223803002_0.500245400892692 chr13 35870197 35872265 + 0.500245400892692 NA intron (NM_009881, intron 8 of 9) intron (NM_009881, intron 8 of 9) 35116 NM_145938 208366 Mm.35545 NM_145938 ENSMUSG00000021418 Rpp40 D8Bwg1265e|Rnasep1 ribonuclease P 40 subunit protein-coding common_peak2_327_3271_-0.0346768343172545_11.6586186157831_0.500178709080165 chr16 56028221 56030774 + 0.500178709080165 NA intron (NM_001024622, intron 1 of 4) CpG 220 NM_001024622 76302 Mm.310642 NM_001024622 ENSMUSG00000071533 Pcnp 1110018D06Rik|AI647035 PEST proteolytic signal containing nuclear protein protein-coding common_peak2_150_1281_-0.05566016163319_10.2963504658021_0.500050538647339 chr5 72734430 72738626 + 0.500050538647339 NA promoter-TSS (NM_013698) promoter-TSS (NM_013698) 74 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_76_509_0.0823681039142077_9.03553748881596_0.499989845951321 chr12 25228863 25229883 + 0.499989845951321 NA Intergenic Intergenic 100199 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_223_2062_-0.0441264223094908_10.9884648947317_0.499906501008211 chr17 25183296 25185673 + 0.499906501008211 NA promoter-TSS (NM_183150) promoter-TSS (NM_183150) -77 NM_183150 214489 Mm.274433 NM_183150 ENSMUSG00000067722 BC003965 Ccsmst1 cDNA sequence BC003965 protein-coding common_peak2_54_383_-0.10367148233524_8.53312675955354_0.499437768123056 chr16 20548004 20549156 + 0.499437768123056 NA promoter-TSS (NR_030670) promoter-TSS (NR_030670) -23 NM_013852 27406 Mm.27135 NM_013852 ENSMUSG00000003234 Abcf3 AI326318|AU016058|BB119416 ATP-binding cassette, sub-family F (GCN20), member 3 protein-coding common_peak1_54_383_-0.10367148233524_8.53312675955354_0.499437768123056 chr18 46958633 46959377 + 0.499437768123056 NA intron (NM_178377, intron 1 of 6) CpG 129 NM_178377 69456 Mm.210734 NM_178377 ENSMUSG00000042705 Commd10 2310003A05Rik|AU019438|DRWMS2 COMM domain containing 10 protein-coding common_peak1_217_1876_0.0441416118851183_10.8962837407734_0.499382066912599 chr6 51470006 51471523 + 0.499382066912599 NA promoter-TSS (NR_104468) promoter-TSS (NR_104468) 148 NM_007624 12417 Mm.280968 NM_007624 ENSMUSG00000029836 Cbx3 HP1g|M32 chromobox 3 protein-coding common_peak2_102_810_-0.072010220440534_9.62755299399701_0.499254253234302 chr1 181255891 181257886 + 0.499254253234302 NA Intergenic Intergenic -44910 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak1_16_73_0.194082895345222_6.30649481330156_0.499127046282402-4 chr8 13652061 13652457 + 0.499127046282402 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 25328 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak1_14_85_-0.24422063329075_6.30415443805672_0.499127046282402-2 chr15 82244046 82244420 + 0.499127046282402 NA 5' UTR (NM_001080158, exon 1 of 5) 5' UTR (NM_001080158, exon 1 of 5) 103 NM_001080158 66570 Mm.23596 NM_025639 ENSMUSG00000068101 Cenpm 2610019I03Rik|AI853711|Pane1 centromere protein M protein-coding unique_peak2_16_73_0.194082895345222_6.30649481330156_0.499127046282402-2 chr19 16778400 16779103 + 0.499127046282402 NA intron (NM_173028, intron 1 of 71) intron (NM_173028, intron 1 of 71) 2182 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding common_peak1_16_73_0.194082895345222_6.30649481330156_0.499127046282402-3 chr3 152340081 152340459 + 0.499127046282402 NA 5' UTR (NM_001162375, exon 1 of 14) 5' UTR (NM_001162375, exon 1 of 14) 137 NM_001162375 215708 Mm.135018 NM_174868 ENSMUSG00000054942 Miga1 A930038D06|AI852168|C030011O14Rik|Fam73a|Mita1 mitoguardin 1 protein-coding common_peak1_16_73_0.194082895345222_6.30649481330156_0.499127046282402 chr1 86306310 86306806 + 0.499127046282402 NA 3' UTR (NM_145222, exon 2 of 2) 3' UTR (NM_145222, exon 2 of 2) 3337 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak1_14_85_-0.24422063329075_6.30415443805672_0.499127046282402 chr11 72998508 72998892 + 0.499127046282402 NA promoter-TSS (NM_008771) promoter-TSS (NM_008771) -445 NM_008771 18436 Mm.25722 NM_008771 ENSMUSG00000020787 P2rx1 AI323649|BB122383|P2x|Pdcd3|RP-2 purinergic receptor P2X, ligand-gated ion channel, 1 protein-coding unique_peak2_16_73_0.194082895345222_6.30649481330156_0.499127046282402 chr10 75353580 75354179 + 0.499127046282402 NA TTS (NR_033602) TTS (NR_033602) 1824 NR_033602 544707 Mm.349862 NR_033602 Gm5779 EG544707 ribosomal protein, large, P0 pseudogene pseudo common_peak1_16_73_0.194082895345222_6.30649481330156_0.499127046282402-5 chrX 169318474 169318875 + 0.499127046282402 NA intron (NM_008222, intron 2 of 6) intron (NM_008222, intron 2 of 6) 1669 NM_008222 15159 Mm.284033 NM_008222 ENSMUSG00000031352 Hccs - holocytochrome c synthetase protein-coding common_peak1_16_73_0.194082895345222_6.30649481330156_0.499127046282402-2 chr14 73124451 73124863 + 0.499127046282402 NA Intergenic Intergenic -17853 NM_001170694 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak1_14_85_-0.24422063329075_6.30415443805672_0.499127046282402-3 chr16 11285211 11285546 + 0.499127046282402 NA Intergenic ID4|SINE|ID -28431 NM_011608 21935 Mm.12935 NM_011608 ENSMUSG00000022496 Tnfrsf17 BCM|BCMA|Tnfrsf13|Tnfrsf13a tumor necrosis factor receptor superfamily, member 17 protein-coding common_peak2_172_1509_-0.051122302719893_10.5347716828525_0.499005795722743 chr14 54491701 54494618 + 0.499005795722743 NA Intergenic B1_Mus1|SINE|Alu 17059 NM_080726 140743 Mm.274727 NM_080726 ENSMUSG00000022176 Rem2 AW411893 rad and gem related GTP binding protein 2 protein-coding common_peak2_177_1457_0.0498556756236077_10.5347028421387_0.499005795722743 chr18 70567482 70570556 + 0.499005795722743 NA intron (NM_010773, intron 1 of 6) intron (NM_010773, intron 1 of 6) 727 NM_010773 17191 Mm.322 NM_010773 ENSMUSG00000024513 Mbd2 MBD2a methyl-CpG binding domain protein 2 protein-coding common_peak1_177_1457_0.0498556756236077_10.5347028421387_0.499005795722743 chr14 26533680 26535066 + 0.499005795722743 NA 5' UTR (NM_032008, exon 1 of 23) 5' UTR (NM_032008, exon 1 of 23) 251 NM_032008 83997 Mm.36769 NM_032008 ENSMUSG00000021870 Slmap D330001L02Rik|Miranda|Slap|mKIAA1601 sarcolemma associated protein protein-coding common_peak1_21_131_-0.184596376664502_6.9520959310262_0.498957950757526 chr14 118940619 118941005 + 0.498957950757526 NA intron (NM_008929, intron 1 of 11) intron (NM_008929, intron 1 of 11) 2880 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding unique_peak2_21_131_-0.184596376664502_6.9520959310262_0.498957950757526 chr7 97480858 97481692 + 0.498957950757526 NA intron (NM_027256, intron 1 of 22) intron (NM_027256, intron 1 of 22) 319 NM_027256 101861 Mm.27383 NM_027256 ENSMUSG00000025133 Ints4 2610034N24Rik|AA692684|AW493223 integrator complex subunit 4 protein-coding common_peak2_65_476_-0.0939131971582743_8.85088885742637_0.498918281532464 chr3 88579110 88580325 + 0.498918281532464 NA promoter-TSS (NM_025448) promoter-TSS (NM_025448) 46 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak2_116_943_-0.0655650836006956_9.84986050756149_0.498891546420219 chr19 10576284 10578180 + 0.498891546420219 NA promoter-TSS (NM_001282067) promoter-TSS (NM_001282067) 75 NM_001282067 225912 Mm.252701 NM_201351 ENSMUSG00000034445 Cyb561a3 2310004G04Rik|Cybasc3|Lcytb cytochrome b561 family, member A3 protein-coding unique_peak2_12_72_-0.261015625425441_6.0593167461673_0.498810849059171-3 chr18 65423756 65424356 + 0.498810849059171 NA intron (NR_105742, intron 3 of 6) intron (NR_105742, intron 3 of 6) -6941 NM_172833 240354 Mm.132613 NM_172833 ENSMUSG00000032688 Malt1 A630046N12|D430033E09Rik|Pcasp1 MALT1 paracaspase protein-coding unique_peak2_12_72_-0.261015625425441_6.0593167461673_0.498810849059171-6 chrX 100774385 100774863 + 0.498810849059171 NA 5' UTR (NM_001177779, exon 1 of 14) 5' UTR (NM_001177779, exon 1 of 14) 129 NM_001177779 53310 Mm.4615 NM_016747 ENSMUSG00000000881 Dlg3 Dlgh3|SAP102|mKIAA1232 discs, large homolog 3 (Drosophila) protein-coding unique_peak2_12_72_-0.261015625425441_6.0593167461673_0.498810849059171-4 chr6 117862926 117863517 + 0.498810849059171 NA intron (NM_008616, intron 1 of 2) intron (NM_008616, intron 1 of 2) 144 NM_001001792 22685 Mm.249661 NM_008616 ENSMUSG00000042097 Zfp239 Mok-2|Mok2|Znf239 zinc finger protein 239 protein-coding common_peak1_12_72_-0.261015625425441_6.0593167461673_0.498810849059171 chr17 27996875 27997243 + 0.498810849059171 NA intron (NM_001286040, intron 11 of 24) intron (NM_001286040, intron 11 of 24) 83525 NM_013687 21463 Mm.29758 NM_013687 ENSMUSG00000062859 Tcp11 D17Ken1|Tcp-11 t-complex protein 11 protein-coding common_peak1_12_72_-0.261015625425441_6.0593167461673_0.498810849059171-2 chr9 21183502 21183848 + 0.498810849059171 NA promoter-TSS (NM_001310750) promoter-TSS (NM_001310750) -426 NM_001310750 18577 Mm.191749 NM_019798 ENSMUSG00000032177 Pde4a D9Ertd60e|Dpde2 phosphodiesterase 4A, cAMP specific protein-coding unique_peak2_12_72_-0.261015625425441_6.0593167461673_0.498810849059171-2 chr12 79650849 79651449 + 0.498810849059171 NA intron (NM_009014, intron 7 of 10) Lx8|LINE|L1 273584 NR_131075 77290 Mm.395042 NR_131073 9430078K24Rik - RIKEN cDNA 9430078K24 gene ncRNA unique_peak2_12_72_-0.261015625425441_6.0593167461673_0.498810849059171-5 chr9 119266189 119266895 + 0.498810849059171 NA intron (NM_133985, intron 7 of 17) intron (NM_133985, intron 7 of 17) -34850 NR_033303 109280 Mm.261557 NM_175420 ENSMUSG00000092212 Slc22a13b-ps 9330176C04Rik|Slc22a13b solute carrier family 22 (organic cation transporter), member 13b, pseudogene pseudo unique_peak2_12_72_-0.261015625425441_6.0593167461673_0.498810849059171 chr1 106703059 106703659 + 0.498810849059171 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) 10931 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak2_47_279_0.111104762333484_8.18483539811171_0.498794044048055 chr10 41489646 41491018 + 0.498794044048055 NA promoter-TSS (NM_009213) promoter-TSS (NM_009213) 8 NM_009213 20598 Mm.953 NM_009213 ENSMUSG00000019822 Smpd2 AW108287|nSMase|nSMase1 sphingomyelin phosphodiesterase 2, neutral protein-coding unique_peak2_10_60_-0.297551906055291_5.78196138453524_0.498709391116689 chr1 60530210 60530733 + 0.498709391116689 NA intron (NM_001045513, intron 2 of 13) intron (NM_001045513, intron 2 of 13) 36294 NM_001045513 77300 Mm.440325 NM_001045513 ENSMUSG00000026014 Raph1 9430025M21Rik|C730009O10Rik|Lpd Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding common_peak2_98_772_-0.0728701401106839_9.55788953386951_0.498312309204507 chr6 65592418 65595609 + 0.498312309204507 NA intron (NM_001001495, intron 2 of 7) B3|SINE|B2 3615 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak2_81_616_-0.081071102897635_9.2285911277006_0.498280379048622 chr8 36167931 36170347 + 0.498280379048622 NA Intergenic ID4_|SINE|ID 74311 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding unique_peak2_26_133_0.156118376381823_7.14414837864868_0.498262468898085 chr14 73401298 73402378 + 0.498262468898085 NA Intergenic Intergenic -16567 NM_008410 16432 Mm.4266 NM_008410 ENSMUSG00000022108 Itm2b AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 integral membrane protein 2B protein-coding common_peak2_89_620_0.0743414905305055_9.31562020348574_0.49808809341615 chr8 105296376 105298491 + 0.49808809341615 NA promoter-TSS (NM_148952) promoter-TSS (NM_148952) -230 NM_148952 104394 Mm.34554 NM_148952 ENSMUSG00000014859 E2f4 2010111M04Rik|AI427446 E2F transcription factor 4 protein-coding common_peak1_126_1041_-0.0629288681044624_9.99367512822628_0.497957418159708 chr17 8143183 8145120 + 0.497957418159708 NA intron (NM_001083938, intron 2 of 8) intron (NM_001083938, intron 2 of 8) 3637 NM_001083938 100037283 Mm.426736 NM_001083938 ENSMUSG00000095687 Rnaset2a 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2A protein-coding common_peak1_201_1820_-0.0470547021850258_10.8069878558843_0.497943517074087 chr1 93803256 93804740 + 0.497943517074087 NA promoter-TSS (NM_025454) promoter-TSS (NM_025454) 33 NM_025454 66262 Mm.64065 NM_025454 ENSMUSG00000026283 Ing5 1700001C14Rik|1700027H23Rik|1810018M11Rik|AI225768 inhibitor of growth family, member 5 protein-coding common_peak2_77_581_-0.0853195821140655_9.14221555185125_0.497833981581124 chr13 67107937 67109337 + 0.497833981581124 NA intron (NM_001256052, intron 2 of 6) intron (NM_001256052, intron 2 of 6) 5391 NM_001256052 432770 Mm.124021 NM_001256052 ENSMUSG00000074824 Rslcan18 mszf51 regulator of sex-limitation candidate 18 protein-coding common_peak2_65_419_0.0896867411811133_8.75908888825668_0.49765021650308 chr17 33780573 33782321 + 0.49765021650308 NA 5' UTR (NM_020581, exon 1 of 7) 5' UTR (NM_020581, exon 1 of 7) 128 NM_020581 57875 Mm.196189 NM_020581 ENSMUSG00000002289 Angptl4 Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158 angiopoietin-like 4 protein-coding common_peak1_29_188_-0.15358599162337_7.48544942840939_0.497637200740629 chr15 66755341 66755970 + 0.497637200740629 NA intron (NM_009375, intron 35 of 47) intron (NM_009375, intron 35 of 47) 76174 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_85_585_0.0775826270180566_9.23354816793128_0.497624352564108 chr13 100669236 100670486 + 0.497624352564108 NA intron (NM_001168386, intron 1 of 9) CpG 380 NM_001168386 76041 Mm.23977 NM_183115 ENSMUSG00000048924 Ccdc125 5830436D01Rik|AL023012 coiled-coil domain containing 125 protein-coding common_peak1_44_257_0.114951382141378_8.06870294649394_0.497165805709506 chr14 25465394 25466096 + 0.497165805709506 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 6560 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_41_279_-0.125196061960112_8.06668498596491_0.497165805709506 chr6 95718070 95719343 + 0.497165805709506 NA exon (NM_011507, exon 1 of 11) exon (NM_011507, exon 1 of 11) 140 NM_011507 20917 Mm.371585 NM_011507 ENSMUSG00000061838 Suclg2 AF171077|AW556404|D6Wsu120e|G-SCS|GTPSCS|SCS-betaG succinate-Coenzyme A ligase, GDP-forming, beta subunit protein-coding common_peak1_41_279_-0.125196061960112_8.06668498596491_0.497165805709506 chr10 21158826 21159614 + 0.497165805709506 NA intron (NM_001198914, intron 1 of 15) CpG 1764 NM_001198914 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding common_peak1_612_6768_0.0231921025133399_12.7363230527911_0.497080457770795 chr15 36791718 36795143 + 0.497080457770795 NA intron (NM_001253806, intron 1 of 5) CpG 1108 NM_011740 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak1_168_1467_-0.0518224043138034_10.4937250506863_0.496947246723439 chr19 6061036 6062622 + 0.496947246723439 NA TTS (NM_028454) TTS (NM_028454) 622 NM_013859 29805 Mm.2310 NM_013859 ENSMUSG00000075227 Znhit2 C11orf5|Fon|ORF6|Znhit2-ps zinc finger, HIT domain containing 2 protein-coding common_peak1_51_359_-0.109819540502386_8.43694332607848_0.496912359500018 chr4 48472752 48473638 + 0.496912359500018 NA intron (NM_172304, intron 1 of 15) CpG 227 NM_172304 269536 Mm.272025 NM_172304 ENSMUSG00000028345 Tex10 2610206N19Rik|2810462N03Rik|BC006867 testis expressed gene 10 protein-coding common_peak1_173_1417_0.0497683246126925_10.4945259795459_0.496811414716458 chr17 21961871 21963413 + 0.496811414716458 NA promoter-TSS (NM_001025373) promoter-TSS (NM_001025373) 83 NM_001025373 74670 Mm.26540 NM_001025373 ENSMUSG00000053347 Zfp943 4930432O21Rik zinc finger prtoein 943 protein-coding common_peak2_317_3001_0.0347803311620627_11.5690984272017_0.496738963673931 chr19 44292615 44296733 + 0.496738963673931 NA intron (NM_009128, intron 1 of 5) intron (NM_009128, intron 1 of 5) 998 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak1_35_232_-0.132888471595257_7.79774190885665_0.496724351164445 chr3 102756093 102756696 + 0.496724351164445 NA intron (NM_001243132, intron 2 of 7) intron (NM_001243132, intron 2 of 7) -20977 NR_040588 78491 Mm.243766 NR_040588 ENSMUSG00000086745 Tspan2os 2410057H14Rik tetraspanin 2, opposite strand ncRNA common_peak1_77_518_0.0799650324363359_9.05957324457605_0.496632494353446 chr4 145277531 145278932 + 0.496632494353446 NA intron (NM_009401, intron 10 of 12) intron (NM_009401, intron 10 of 12) -31361 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_32_210_-0.143779241046306_7.64920956818403_0.496589874666241-3 chr6 99027841 99028720 + 0.496589874666241 NA promoter-TSS (NM_001197322) promoter-TSS (NM_001197322) 18 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_32_210_-0.143779241046306_7.64920956818403_0.496589874666241 chr17 21423126 21423903 + 0.496589874666241 NA 5' UTR (NM_011760, exon 1 of 4) 5' UTR (NM_011760, exon 1 of 4) 287 NM_011760 22712 Mm.12916 NM_011760 ENSMUSG00000023882 Zfp54 2810034D10Rik|KRAB10|Zfp-54|Zfp76|mszf83 zinc finger protein 54 protein-coding common_peak1_32_210_-0.143779241046306_7.64920956818403_0.496589874666241-2 chr17 36431081 36431597 + 0.496589874666241 NA Intergenic Intergenic 30990 NM_177634 224753 Mm.246581 NM_177634 ENSMUSG00000048231 H2-M10.4 15H histocompatibility 2, M region locus 10.4 protein-coding unique_peak2_21_102_0.173297215510733_6.77314913493858_0.496397714646132-2 chr9 79977397 79978364 + 0.496397714646132 NA promoter-TSS (NM_001081243) promoter-TSS (NM_001081243) 2 NM_001081243 70598 Mm.23049 NM_001081243 ENSMUSG00000034898 Filip1 5730485H21Rik|AI843021 filamin A interacting protein 1 protein-coding unique_peak2_21_102_0.173297215510733_6.77314913493858_0.496397714646132 chr9 41134625 41135735 + 0.496397714646132 NA intron (NM_176860, intron 1 of 13) MLT1A|LTR|ERVL-MaLR 22314 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak2_196_1654_0.0464911149307206_10.7158610591599_0.496361452389343 chr5 31601207 31604029 + 0.496361452389343 NA Intergenic Intergenic -11333 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak2_103_744_0.0675492516641203_9.57487124118158_0.495983271262962 chr14 60716763 60719724 + 0.495983271262962 NA intron (NM_001033272, intron 4 of 12) B1F|SINE|Alu -14661 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak1_99_781_-0.071784982798258_9.57513230590822_0.495983271262962 chr7 105810304 105811175 + 0.495983271262962 NA intron (NM_025301, intron 1 of 2) CpG 348 NM_025301 27397 Mm.44225 NM_025301 ENSMUSG00000030879 Mrpl17 MRP-L26|Rpml26 mitochondrial ribosomal protein L17 protein-coding common_peak1_14_62_0.204764197911431_6.07966202245563_0.495874201160619-5 chr9 121958284 121958620 + 0.495874201160619 NA intron (NM_001199927, intron 1 of 4) intron (NM_001199927, intron 1 of 4) 7432 NM_001199927 245050 Mm.71062 NM_177743 ENSMUSG00000038233 Fam198a C730027P07Rik family with sequence similarity 198, member A protein-coding common_peak1_14_62_0.204764197911431_6.07966202245563_0.495874201160619-4 chr16 44015887 44016293 + 0.495874201160619 NA 5' UTR (NM_153528, exon 1 of 13) 5' UTR (NM_153528, exon 1 of 13) 346 NM_153528 207798 Mm.19316 NM_153528 ENSMUSG00000036292 Gramd1c 4921521N14Rik GRAM domain containing 1C protein-coding common_peak1_14_62_0.204764197911431_6.07966202245563_0.495874201160619 chr10 98878113 98878447 + 0.495874201160619 NA Intergenic Intergenic -36872 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding unique_peak2_14_62_0.204764197911431_6.07966202245563_0.495874201160619-3 chr7 114083176 114083772 + 0.495874201160619 NA intron (NM_025846, intron 1 of 5) B1_Mur1|SINE|Alu 34307 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak2_14_62_0.204764197911431_6.07966202245563_0.495874201160619-2 chr18 66750500 66751136 + 0.495874201160619 NA Intergenic IAPEz-int|LTR|ERVK 109669 NM_016977 17202 Mm.229447 NM_016977 ENSMUSG00000047259 Mc4r Mc4-r melanocortin 4 receptor protein-coding common_peak1_14_62_0.204764197911431_6.07966202245563_0.495874201160619-2 chr11 75957100 75957541 + 0.495874201160619 NA Intergenic Intergenic -31429 NM_001291159 380714 Mm.425697 NM_029548 ENSMUSG00000020847 Rph3al Gm1753|Noc2 rabphilin 3A-like (without C2 domains) protein-coding unique_peak2_14_62_0.204764197911431_6.07966202245563_0.495874201160619 chr13 51637050 51637625 + 0.495874201160619 NA Intergenic MMVL30-int|LTR|ERV1 -7895 NM_025415 66197 Mm.222228 NM_025415 ENSMUSG00000062248 Cks2 1110038L14Rik|CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding common_peak1_14_62_0.204764197911431_6.07966202245563_0.495874201160619-3 chr15 81928409 81928768 + 0.495874201160619 NA Intergenic Intergenic -2375 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding common_peak1_180_1594_-0.0501333931758694_10.6142740120643_0.495605963402701 chr2 90745368 90746453 + 0.495605963402701 NA intron (NM_018828, intron 1 of 16) CpG 540 NM_018828 55935 Mm.489638 NM_018828 ENSMUSG00000008200 Fnbp4 FBP30|Fnbp30|mKIAA1014 formin binding protein 4 protein-coding common_peak1_29_153_0.141869891902802_7.3377214866463_0.495409431582872-3 chr4 83273285 83273955 + 0.495409431582872 NA intron (NM_027238, intron 2 of 19) RMER17B|LTR|ERVK 50569 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_29_153_0.141869891902802_7.3377214866463_0.495409431582872 chr10 39415152 39415752 + 0.495409431582872 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 45653 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_29_153_0.141869891902802_7.3377214866463_0.495409431582872-2 chr13 46725794 46726417 + 0.495409431582872 NA intron (NM_175749, intron 1 of 21) intron (NM_175749, intron 1 of 21) 1744 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding common_peak1_48_334_-0.111141048434451_8.33244676112791_0.495293627236104 chr14 69337112 69337654 + 0.495293627236104 NA promoter-TSS (NR_045091) promoter-TSS (NR_045091) 232 NM_026174 67464 Mm.489765 NM_026174 ENSMUSG00000095463 Entpd4 1200014F22Rik|4930513O14Rik|A430102M06Rik|AI414893|Lysal1|mKIAA0392 ectonucleoside triphosphate diphosphohydrolase 4 protein-coding common_peak1_48_334_-0.111141048434451_8.33244676112791_0.495293627236104-2 chr5 113834687 113835632 + 0.495293627236104 NA Intergenic Intergenic -4658 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak2_51_310_0.101262785696685_8.33140216297895_0.495293627236005 chr2 173037031 173038963 + 0.495293627236005 NA Intergenic Intergenic 16095 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak2_51_310_0.101262785696685_8.33140216297895_0.495293627236005-2 chr9 92265321 92266666 + 0.495293627236005 NA intron (NM_011636, intron 5 of 8) intron (NM_011636, intron 5 of 8) 1368 NR_105808 102465203 NR_105808 ENSMUSG00000098766 Mir6386 Gm27842|mmu-mir-6386 microRNA 6386 ncRNA common_peak1_12_51_0.228369215313485_5.81462432579783_0.495169887621104 chr1 136684047 136684356 + 0.495169887621104 NA intron (NR_045325, intron 1 of 2) intron (NR_045325, intron 1 of 2) 572 NR_045325 100503460 Mm.30630 NR_045324 ENSMUSG00000097113 Gm19705 - predicted gene, 19705 ncRNA common_peak2_240_2252_-0.0417801029807787_11.116741546745_0.495104823117559 chr9 119339318 119342070 + 0.495104823117559 NA promoter-TSS (NM_010851) promoter-TSS (NM_010851) -600 NM_130864 113868 Mm.205266 NM_130864 ENSMUSG00000036138 Acaa1a Acaa|Acaa1|D9Ertd25e|PTL acetyl-Coenzyme A acyltransferase 1A protein-coding common_peak2_70_519_-0.0892082671814372_8.97776367943774_0.494940093374067 chrX 36873826 36875359 + 0.494940093374067 NA intron (NM_019668, intron 1 of 5) CpG 297 NM_019668 22209 Mm.395649 NM_019668 ENSMUSG00000016308 Ube2a HHR6A|HR6A|Mhr6a ubiquitin-conjugating enzyme E2A protein-coding common_peak1_70_519_-0.0892082671814372_8.97776367943774_0.494940093374067 chr1 91412418 91413310 + 0.494940093374067 NA intron (NM_019479, intron 2 of 3) CpG-403 358 NM_019479 55927 Mm.280029 NM_019479 ENSMUSG00000067071 Hes6 AI326893|bHLHb41 hairy and enhancer of split 6 protein-coding common_peak1_95_744_-0.0740965248847161_9.50404835290717_0.494867229618195 chr15 6518864 6519905 + 0.494867229618195 NA Intergenic B3A|SINE|B2 -60463 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak2_35_193_0.131384830871895_7.66560525762308_0.494656993031278 chr1 52708986 52709947 + 0.494656993031278 NA exon (NM_178081, exon 2 of 6) exon (NM_178081, exon 2 of 6) 17852 NM_178081 98682 Mm.491173 NM_133829 ENSMUSG00000041439 Mfsd6 2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2 major facilitator superfamily domain containing 6 protein-coding common_peak1_19_117_-0.191508821731065_6.78688863849631_0.494619229788129-3 chr18 80086423 80086925 + 0.494619229788129 NA intron (NM_053117, intron 2 of 2) intron (NM_053117, intron 2 of 2) 39779 NM_053117 93737 Mm.24678 NM_053117 ENSMUSG00000056214 Pard6g 2410049N21Rik|Par6a par-6 family cell polarity regulator gamma protein-coding common_peak1_19_117_-0.191508821731065_6.78688863849631_0.494619229788129-6 chr9 20384728 20385163 + 0.494619229788129 NA intron (NM_001004190, intron 1 of 6) CpG 213 NM_001004190 434377 Mm.379669 NM_001004190 ENSMUSG00000045519 Zfp560 2310030G09Rik|Znf560 zinc finger protein 560 protein-coding common_peak1_19_117_-0.191508821731065_6.78688863849631_0.494619229788129-2 chr12 102348646 102349091 + 0.494619229788129 NA intron (NM_001161365, intron 3 of 9) intron (NM_001161365, intron 3 of 9) 65227 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak2_19_117_-0.191508821731065_6.78688863849631_0.494619229788129-2 chr4 154142305 154142927 + 0.494619229788129 NA intron (NM_021499, intron 1 of 11) GC_rich|Low_complexity|Low_complexity 244 NM_021499 59002 Mm.46508 NM_021499 ENSMUSG00000029029 Wrap73 2610044M17Rik|5330425N03Rik|Dd57|Wdr8 WD repeat containing, antisense to Trp73 protein-coding unique_peak2_19_117_-0.191508821731065_6.78688863849631_0.494619229788129 chr16 13218970 13219913 + 0.494619229788129 NA Intergenic MTD|LTR|ERVL-MaLR -37040 NM_001122667 239719 Mm.270643 NM_153588 ENSMUSG00000009569 Mkl2 ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243 MKL/myocardin-like 2 protein-coding common_peak1_19_117_-0.191508821731065_6.78688863849631_0.494619229788129-5 chr5 86086523 86087006 + 0.494619229788129 NA exon (NM_019992, exon 5 of 9) exon (NM_019992, exon 5 of 9) 15018 NM_001310639 56792 Mm.131237 NM_019992 ENSMUSG00000029254 Stap1 AI586015|Brdg1|STAP-1 signal transducing adaptor family member 1 protein-coding common_peak1_19_117_-0.191508821731065_6.78688863849631_0.494619229788129 chr11 94591598 94592101 + 0.494619229788129 NA intron (NM_153807, intron 1 of 15) Lx8|LINE|L1 9937 NM_153807 264895 Mm.386885 NM_153807 ENSMUSG00000076435 Acsf2 - acyl-CoA synthetase family member 2 protein-coding common_peak1_19_117_-0.191508821731065_6.78688863849631_0.494619229788129-4 chr5 35674264 35674701 + 0.494619229788129 NA intron (NM_030127, intron 1 of 8) intron (NM_030127, intron 1 of 8) 5298 NM_001042615 78558 Mm.274255 NM_030127 ENSMUSG00000029096 Htra3 2210021K23Rik|9530081K03Rik|Prsp|Tasp HtrA serine peptidase 3 protein-coding unique_peak2_19_117_-0.191508821731065_6.78688863849631_0.494619229788129-3 chr6 47777963 47778639 + 0.494619229788129 NA Intergenic 4.5SRNA|scRNA|scRNA 25351 NR_030485 735289 NR_030485 ENSMUSG00000076060 Mir704 Mirn704|mir-704|mmu-mir-704 microRNA 704 ncRNA common_peak2_32_173_0.134376451812152_7.5101317217548_0.494393754694413-2 chr2 32606837 32607791 + 0.494393754694413 NA intron (NM_001025310, intron 1 of 5) intron (NM_001025310, intron 1 of 5) 329 NR_110347 50935 Mm.88831 NM_016973 ENSMUSG00000026811 St6galnac6 ST6GalNAcVI|Siat7f ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 protein-coding common_peak2_32_173_0.134376451812152_7.5101317217548_0.494393754694413 chr1 64690876 64691734 + 0.494393754694413 NA promoter-TSS (NM_001097644) promoter-TSS (NM_001097644) -40 NM_001097644 227210 Mm.39706 NM_001097644 ENSMUSG00000070871 Ccnyl1 9630037P07Rik|AW554339 cyclin Y-like 1 protein-coding common_peak1_32_173_0.134376451812152_7.5101317217548_0.494393754694413 chr5 8798197 8798842 + 0.494393754694413 NA intron (NM_011075, intron 1 of 27) CpG 372 NM_011075 18669 Mm.146649 NM_011075 ENSMUSG00000028970 Abcb1b Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr ATP-binding cassette, sub-family B (MDR/TAP), member 1B protein-coding unique_peak2_24_152_-0.171372650556268_7.17170151741452_0.494149178187107 chr11 52310333 52311481 + 0.494149178187107 NA Intergenic Intergenic -27893 NM_001313981 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak1_91_707_-0.0759201236167737_9.42964548827461_0.493948006375728 chr17 35120379 35121341 + 0.493948006375728 NA promoter-TSS (NM_001128597) promoter-TSS (NM_001128597) 432 NM_001303476 13001 Mm.378901 NM_009975 ENSMUSG00000024387 Csnk2b CK II beta casein kinase 2, beta polypeptide protein-coding common_peak1_395_4110_-0.0305945703770618_11.9899763713754_0.493890151083915 chr2 3712807 3716554 + 0.493890151083915 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 1222 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_314_2967_0.0344393702092987_11.5524950617255_0.493672934116779 chr3 103019352 103022228 + 0.493672934116779 NA intron (NM_001161854, intron 1 of 18) CpG 244 NM_144901 229663 Mm.277713 NM_144901 ENSMUSG00000068823 Csde1 AA960392|BC016898|D3Jfr1|mKIAA0885|unr cold shock domain containing E1, RNA binding protein-coding common_peak2_55_340_0.0995491321801083_8.46340249511423_0.493576780814511 chr14 8213525 8214909 + 0.493576780814511 NA promoter-TSS (NM_001305936) promoter-TSS (NM_001305936) 136 NM_027782 71393 Mm.292712 NM_027782 ENSMUSG00000021752 Kctd6 5430433B02Rik|AU044285 potassium channel tetramerisation domain containing 6 protein-coding common_peak1_138_1070_0.0572420160423448_10.0933637727714_0.493532514766331 chr7 25682967 25685004 + 0.493532514766331 NA intron (NM_172148, intron 2 of 2) intron (NM_172148, intron 2 of 2) 2827 NM_172148 232987 Mm.22849 NM_172148 ENSMUSG00000063439 B9d2 stumpy B9 protein domain 2 protein-coding common_peak2_114_923_-0.0651826504442283_9.81915771619394_0.49342423538217 chr7 64391526 64393332 + 0.49342423538217 NA promoter-TSS (NM_026483) promoter-TSS (NM_026483) -193 NM_026483 67973 Mm.26973 NM_026483 ENSMUSG00000030521 Mphosph10 2810453H10Rik|5730405D16Rik|AI326008 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) protein-coding common_peak2_59_425_-0.0994408764417773_8.68498918200495_0.493410004132549 chr17 26243343 26244295 + 0.493410004132549 NA intron (NM_001206335, intron 1 of 12) intron (NM_001206335, intron 1 of 12) 423 NM_207217 106581 Mm.28844 NM_207217 ENSMUSG00000024187 Fam234a Itfg3 family with sequence similarity 234, member A protein-coding common_peak1_344_3477_-0.0333413101814735_11.7473715622159_0.493169633464188 chr4 108832579 108835100 + 0.493169633464188 NA promoter-TSS (NM_025334) promoter-TSS (NM_025334) -255 NM_027453 70533 Mm.379178 NM_027453 ENSMUSG00000028568 Btf3l4 4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446 basic transcription factor 3-like 4 protein-coding common_peak1_344_3477_-0.0333413101814735_11.7473715622159_0.493169633464188-2 chr8 88696057 88698221 + 0.493169633464188 NA intron (NM_173369, intron 1 of 16) CpG 111 NM_001128171 74256 Mm.490395 NM_173369 ENSMUSG00000036712 Cyld 2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849 CYLD lysine 63 deubiquitinase protein-coding common_peak1_160_1383_-0.0526313142777468_10.4083125704979_0.492932384895372 chr16 92880265 92882965 + 0.492932384895372 NA Intergenic Intergenic -55541 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_309_3054_-0.035556561907109_11.5591783837525_0.492779103795881 chr15 76194594 76197411 + 0.492779103795881 NA promoter-TSS (NM_201394) promoter-TSS (NM_201394) -292 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak2_352_3574_-0.032460315893152_11.7874973686065_0.492746524410383 chr10 13981317 13985022 + 0.492746524410383 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 16790 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_352_3574_-0.032460315893152_11.7874973686065_0.492746524410383 chr4 133619477 133622723 + 0.492746524410383 NA intron (NM_001017968, intron 2 of 7) intron (NM_001017968, intron 2 of 7) 12329 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak2_105_837_-0.0684523570698836_9.67658025516441_0.492710201617368 chr12 111966025 111967430 + 0.492710201617368 NA intron (NM_027360, intron 1 of 3) CpG 250 NM_027360 70257 Mm.318 NM_027360 ENSMUSG00000021290 2010107E04Rik 9430003J03Rik|AU043134|AV124504|Mp68 RIKEN cDNA 2010107E04 gene protein-coding common_peak1_176_1448_0.0488190416381791_10.525251400376_0.492692082172444 chr19 21652140 21654128 + 0.492692082172444 NA promoter-TSS (NM_146096) promoter-TSS (NM_146096) -175 NM_146096 226016 Mm.28796 NM_146096 ENSMUSG00000047368 Abhd17b 5730446C15Rik|Cgi67|Fam108b|Fam108b1 abhydrolase domain containing 17B protein-coding common_peak1_42_286_-0.119179756421737_8.10531704846482_0.492170557561284 chr13 96670975 96671771 + 0.492170557561284 NA promoter-TSS (NM_008255) promoter-TSS (NM_008255) -437 NM_008255 15357 Mm.316652 NM_008255 ENSMUSG00000021670 Hmgcr HMG-CoAR|Red 3-hydroxy-3-methylglutaryl-Coenzyme A reductase protein-coding common_peak2_42_286_-0.119179756421737_8.10531704846482_0.492170557561284 chr7 58749198 58751015 + 0.492170557561284 NA intron (NM_009728, intron 2 of 20) intron (NM_009728, intron 2 of 20) 91904 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_160_1286_0.0522005751382775_10.3558966257898_0.491997642418217 chr10 71347044 71348839 + 0.491997642418217 NA 5' UTR (NM_027184, exon 1 of 6) 5' UTR (NM_027184, exon 1 of 6) 148 NM_027184 69718 Mm.245867 NM_027184 ENSMUSG00000060733 Ipmk 2410017C19Rik|AA408208|Impk inositol polyphosphate multikinase protein-coding common_peak1_75_562_-0.0834022863106263_9.09528996892492_0.491978289442529 chr6 8259186 8260088 + 0.491978289442529 NA promoter-TSS (NM_026632) promoter-TSS (NM_026632) 349 NM_001302353 100036521 Mm.446106 NM_001302353 ENSMUSG00000089862 Umad1 Gm16039|OTTMUSG00000029336 UMAP1-MVP12 associated (UMA) domain containing 1 protein-coding common_peak1_171_1397_0.049803147251227_10.4740502190011_0.491921722606462 chr14 118937913 118938806 + 0.491921722606462 NA intron (NM_008929, intron 1 of 11) CpG 427 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding common_peak2_150_1280_-0.054534375356095_10.2957875726636_0.491919857914885 chr9 51007790 51010800 + 0.491919857914885 NA promoter-TSS (NM_178710) promoter-TSS (NM_178710) -222 NM_178710 235344 Mm.104932 NM_178710 ENSMUSG00000037112 Sik2 G630080D20Rik|Snf1lk2 salt inducible kinase 2 protein-coding common_peak2_27_173_-0.156378745830803_7.36475412293333_0.491861328149866 chr3 52499104 52500013 + 0.491861328149866 NA Intergenic Intergenic 231221 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_27_173_-0.156378745830803_7.36475412293333_0.491861328149866 chr13 81793787 81794480 + 0.491861328149866 NA intron (NM_007684, intron 4 of 4) B4A|SINE|B4 10841 NM_007684 12626 Mm.12481 NM_007684 ENSMUSG00000021537 Cetn3 MmCEN3 centrin 3 protein-coding common_peak2_282_2597_0.0369563739948831_11.3616639024453_0.491854167299338 chr3 95950249 95952010 + 0.491854167299338 NA Intergenic CpG 21872 NM_023210 66471 Mm.218657 NM_023210 ENSMUSG00000015749 Anp32e 2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L acidic (leucine-rich) nuclear phosphoprotein 32 family, member E protein-coding common_peak1_59_372_0.092236923528823_8.58915028201965_0.491704595512103 chr5 30666046 30666794 + 0.491704595512103 NA promoter-TSS (NM_001302130) promoter-TSS (NM_001302130) -466 NM_001302130 12615 Mm.290563 NM_007681 ENSMUSG00000029177 Cenpa Cenp-A centromere protein A protein-coding common_peak2_331_3167_0.0333738714614515_11.6460435558103_0.491618404193018 chr1 93477351 93480491 + 0.491618404193018 NA promoter-TSS (NM_010891) promoter-TSS (NM_010891) -4 NM_133808 110611 Mm.30012 NM_133808 ENSMUSG00000034088 Hdlbp 1110005P14Rik|AA960365|AI118566|D1Ertd101e high density lipoprotein (HDL) binding protein protein-coding common_peak1_101_799_-0.0695731014609127_9.60906963904427_0.491486379360108 chr15 76330705 76332265 + 0.491486379360108 NA TTS (NM_175399) TTS (NM_175399) 191 NM_010331 14731 Mm.5903 NM_010331 ENSMUSG00000022561 Gpaa1 C80044|mGAA1 GPI anchor attachment protein 1 protein-coding common_peak2_45_265_0.109790679778676_8.11017777539053_0.491477651573836 chr18 88971472 88972474 + 0.491477651573836 NA promoter-TSS (NR_105777) promoter-TSS (NR_105777) -57 NR_105777 102466633 NR_105777 ENSMUSG00000098676 Mir6359 Gm27328|mmu-mir-6359 microRNA 6359 ncRNA common_peak1_45_265_0.109790679778676_8.11017777539053_0.491477651573836 chr14 40967240 40967772 + 0.491477651573836 NA promoter-TSS (NM_145928) promoter-TSS (NM_145928) -610 NM_145928 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding common_peak1_19_90_0.18333958743208_6.59946443391474_0.491318514483967 chr13 112062850 112063483 + 0.491318514483967 NA Intergenic MER5A1|DNA|hAT-Charlie 195230 NR_130345 102636620 Mm.402328 NR_130345 ENSMUSG00000086111 Gm15326 OTTMUSG00000020187 predicted gene 15326 ncRNA unique_peak2_19_90_0.18333958743208_6.59946443391474_0.491318514483967 chr17 73136203 73137082 + 0.491318514483967 NA intron (NM_001081071, intron 1 of 5) Lx8|LINE|L1 28657 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding common_peak1_19_90_0.18333958743208_6.59946443391474_0.491318514483967-3 chr7 80636351 80636770 + 0.491318514483967 NA intron (NR_040343, intron 2 of 4) MTD|LTR|ERVL-MaLR 543 NR_040343 100504375 Mm.322881 NR_040343 ENSMUSG00000084821 Gm15880 OTTMUSG00000027171 predicted gene 15880 ncRNA common_peak1_19_90_0.18333958743208_6.59946443391474_0.491318514483967-2 chr17 35209778 35210282 + 0.491318514483967 NA Intergenic Intergenic -4679 NM_010735 16992 Mm.87787 NM_010735 ENSMUSG00000024402 Lta LT|LT-[a]|LT-alpha|LT[a]|LTalpha|Ltx|TNF-beta|TNFSF1|Tnfb|Tnfsf1b|Tnlg1e|hlb382 lymphotoxin A protein-coding common_peak2_155_1237_0.0523724727663097_10.2999818355974_0.491314028421644-2 chr9 70011795 70013645 + 0.491314028421644 NA 5' UTR (NM_001282083, exon 1 of 5) 5' UTR (NM_001282083, exon 1 of 5) 172 NM_001282083 235459 Mm.293117 NM_199151 ENSMUSG00000033543 Gtf2a2 TFIIA-gamma|TfIIg|Tfiia2 general transcription factor II A, 2 protein-coding common_peak2_155_1237_0.0523724727663097_10.2999818355974_0.491314028421644 chr3 130728868 130731162 + 0.491314028421644 NA intron (NM_001199350, intron 1 of 4) CpG 314 NM_001199350 619547 Mm.391636 NM_001199350 Rpl34-ps1 EG619547|ENSMUSG00000068396|Gm10239 ribosomal protein L34, pseudogene 1 protein-coding common_peak1_24_121_0.155277854573497_7.00837626484964_0.491247531804488 chr1 165722161 165722777 + 0.491247531804488 NA Intergenic PB1|SINE|Alu -14375 NM_001038846 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding common_peak2_24_121_0.155277854573497_7.00837626484964_0.491247531804488 chr6 140337863 140338713 + 0.491247531804488 NA Intergenic Intergenic -85811 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding common_peak1_24_121_0.155277854573497_7.00837626484964_0.491247531804488-4 chr15 41611540 41612142 + 0.491247531804488 NA intron (NM_001130166, intron 2 of 16) intron (NM_001130166, intron 2 of 16) 164359 NM_001130166 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_24_121_0.155277854573497_7.00837626484964_0.491247531804488-2 chr11 60222604 60223113 + 0.491247531804488 NA Intergenic CpG -2231 NM_001313979 20787 Mm.278701 NM_011480 ENSMUSG00000020538 Srebf1 ADD1|SREBP-1a|SREBP1|SREBP1c|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding common_peak1_24_121_0.155277854573497_7.00837626484964_0.491247531804488-5 chr5 112326940 112327462 + 0.491247531804488 NA intron (NM_018783, intron 1 of 13) B1_Mm|SINE|Alu 832 NM_018783 54723 Mm.172947 NM_018783 ENSMUSG00000029345 Tfip11 2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39 tuftelin interacting protein 11 protein-coding common_peak1_24_121_0.155277854573497_7.00837626484964_0.491247531804488-3 chr13 12634859 12635467 + 0.491247531804488 NA intron (NR_003568, intron 1 of 6) L1MB8|LINE|L1 15232 NR_003568 664862 Mm.415635 NR_003568 Gpr137b-ps 2310041G17Rik|ENSMUSG00000075118 G protein-coupled receptor 137B, pseudogene pseudo common_peak1_56_399_-0.0993574702245521_8.59417745466245_0.491210432722307 chr13 114303972 114304910 + 0.491210432722307 NA intron (NM_010887, intron 4 of 4) ORR1C2|LTR|ERVL-MaLR 83653 NM_010887 17993 Mm.253142 NM_010887 ENSMUSG00000021764 Ndufs4 6720411N02Rik|C1-18k NADH dehydrogenase (ubiquinone) Fe-S protein 4 protein-coding common_peak1_213_1950_-0.0444153320668974_10.9077903965756_0.491168222393291 chr4 155811626 155813476 + 0.491168222393291 NA promoter-TSS (NM_207678) promoter-TSS (NM_207678) 62 NM_207678 56036 Mm.23492 NM_018856 ENSMUSG00000029068 Ccnl2 1700010A01Rik|1810019L15Rik|2010319M22Rik|AA409936|AW261738|Ania-6b|HCLA-150|Pcee|SB138 cyclin L2 protein-coding common_peak1_83_569_0.075881157119106_9.19275868761166_0.491103931954415 chr1 128357818 128359002 + 0.491103931954415 NA intron (NM_008567, intron 1 of 16) B1_Mur4|SINE|Alu 1295 NM_008567 17219 Mm.4933 NM_008567 ENSMUSG00000026355 Mcm6 ASP-l1|D1Wsu22e|Mcmd6 minichromosome maintenance complex component 6 protein-coding common_peak1_183_1520_0.0474932999280817_10.5945510876885_0.490937440956375 chr11 115161047 115163295 + 0.490937440956375 NA TTS (NM_021411) TTS (NM_021411) -1170 NM_012030 26941 Mm.27842 NM_012030 ENSMUSG00000020733 Slc9a3r1 EBP-50|NHE-RF|NHERF-1|NHERF1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 protein-coding common_peak2_49_342_-0.109437262850072_8.36734613474778_0.490582102505969 chr7 110221136 110222627 + 0.490582102505969 NA exon (NM_009302, exon 1 of 12) exon (NM_009302, exon 1 of 12) 178 NM_009302 20947 Mm.334144 NM_009302 ENSMUSG00000031015 Swap70 70kDa|AV235546 SWA-70 protein protein-coding common_peak1_49_342_-0.109437262850072_8.36734613474778_0.490582102505969 chr14 120985608 120986424 + 0.490582102505969 NA Intergenic (TCTA)n|Simple_repeat|Simple_repeat -49558 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding common_peak2_244_2171_0.0401734359846433_11.1048951057967_0.490571677960605 chr8 111258020 111260208 + 0.490571677960605 NA promoter-TSS (NM_009149) promoter-TSS (NM_009149) 88 NM_009149 20340 Mm.276271 NM_009149 ENSMUSG00000003316 Glg1 AI593353|AW537898|CFR|CFR-1|ESL-1|MG-160|MG160|Selel golgi apparatus protein 1 protein-coding common_peak2_75_501_0.0820452718188314_9.01256618986019_0.490429270131791 chr3 122923770 122924991 + 0.490429270131791 NA promoter-TSS (NM_024461) promoter-TSS (NM_024461) -17 NM_024461 67704 Mm.24219 NM_024461 ENSMUSG00000054091 1810037I17Rik 5730414I01Rik RIKEN cDNA 1810037I17 gene protein-coding common_peak2_151_1291_-0.0551892177379667_10.3077957458249_0.490263029362589 chr17 29659950 29661694 + 0.490263029362589 NA intron (NM_028791, intron 1 of 23) CpG 227 NM_028791 74157 Mm.390979 NM_028791 ENSMUSG00000024019 Cmtr1 1300018I05Rik|AI451264|Ftsjd2|MTr1 cap methyltransferase 1 protein-coding common_peak1_30_195_-0.148027639380902_7.54069602442476_0.490232108329943 chr14 61359966 61360577 + 0.490232108329943 NA exon (NM_026598, exon 1 of 4) exon (NM_026598, exon 1 of 4) 174 NM_026598 68177 Mm.22758 NM_026598 ENSMUSG00000021928 Ebpl 5730442K12Rik|EBRP emopamil binding protein-like protein-coding common_peak1_202_1829_-0.045428509393366_10.8149136784747_0.490091956498684 chr4 122870842 122873778 + 0.490091956498684 NA intron (NM_001301067, intron 2 of 12) intron (NM_001301067, intron 2 of 12) 13747 NM_007598 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak2_178_1469_0.0479441456990415_10.5455725125732_0.489998674835833 chr16 64872788 64874659 + 0.489998674835833 NA Intergenic Intergenic 21638 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak1_33_217_-0.138035752616399_7.69916644846873_0.489987977611939 chr19 40662983 40663654 + 0.489987977611939 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 3548 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak2_42_243_0.114989832691064_7.98823225390842_0.489963593326342 chr9 65435720 65436560 + 0.489963593326342 NA intron (NM_027134, intron 1 of 8) intron (NM_027134, intron 1 of 8) 358 NM_027134 69606 Mm.287956 NM_027134 ENSMUSG00000059183 Mtfmt 2310020P08Rik mitochondrial methionyl-tRNA formyltransferase protein-coding common_peak1_36_240_-0.133105685018552_7.84633649372069_0.489913219242134 chr13 91636271 91636919 + 0.489913219242134 NA intron (NM_024186, intron 4 of 15) intron (NM_024186, intron 4 of 15) -104926 NM_028790 74156 Mm.275963 NM_028790 ENSMUSG00000021620 Acot12 1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1 acyl-CoA thioesterase 12 protein-coding unique_peak2_36_240_-0.133105685018552_7.84633649372069_0.489913219242134 chr2 16682898 16683215 + 0.489913219242134 NA intron (NM_026162, intron 9 of 13) intron (NM_026162, intron 9 of 13) 326752 NM_026162 67448 Mm.313938 NM_026162 ENSMUSG00000026748 Plxdc2 1200007L24Rik|5430431D22Rik|AI646728|AU022916|AV231634|Tem7r plexin domain containing 2 protein-coding common_peak2_146_1240_-0.0562766470663885_10.2491490765972_0.48981837611808 chr16 38451849 38453766 + 0.48981837611808 NA promoter-TSS (NM_007414) promoter-TSS (NM_007414) -118 NM_007414 11544 Mm.20047 NM_007414 ENSMUSG00000002844 Adprh Arh1 ADP-ribosylarginine hydrolase protein-coding common_peak1_60_433_-0.0970317813975061_8.71303534174573_0.489739975812719 chr3 108044306 108045264 + 0.489739975812719 NA promoter-TSS (NM_026764) promoter-TSS (NM_026764) 71 NM_026764 14865 Mm.31203 NM_026764 ENSMUSG00000027890 Gstm4 1110004G14Rik|GSTM7-7|Gstb-4|Gstb4 glutathione S-transferase, mu 4 protein-coding common_peak1_17_104_-0.209560155793455_6.60946543976939_0.489363922741911 chr1 80766393 80766741 + 0.489363922741911 NA Intergenic Intergenic -8014 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding unique_peak2_17_104_-0.209560155793455_6.60946543976939_0.489363922741911 chr5 21377884 21378839 + 0.489363922741911 NA TTS (NM_008013) TTS (NM_008013) 5688 NM_008013 14190 Mm.292100 NM_008013 ENSMUSG00000039899 Fgl2 AI385601|musfiblp fibrinogen-like protein 2 protein-coding common_peak1_131_1089_-0.0595678496306977_10.0603284948489_0.489101376169233 chr8 120756772 120758566 + 0.489101376169233 NA TTS (NM_001301811) TTS (NM_001301811) 19030 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_102_809_-0.0702302139952486_9.62666299077436_0.489076621112322 chr13 115089328 115091207 + 0.489076621112322 NA promoter-TSS (NM_134058) promoter-TSS (NM_134058) -109 NM_134058 105083 Mm.486295 NM_134058 ENSMUSG00000042275 Pelo AA409897|AI852218 pelota homolog (Drosophila) protein-coding common_peak1_343_3463_-0.0326591109137073_11.7418936592699_0.4890126375586 chr14 54230910 54234920 + 0.4890126375586 NA Intergenic MTD|LTR|ERVL-MaLR 21014 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_27_140_0.147013397619132_7.21305805120836_0.488924577005941 chr2 167146326 167146910 + 0.488924577005941 NA intron (NM_008420, intron 1 of 1) intron (NM_008420, intron 1 of 1) 42200 NM_008420 16500 Mm.205341 NM_008420 ENSMUSG00000050556 Kcnb1 Kcr1-1|Kv2.1|Shab potassium voltage gated channel, Shab-related subfamily, member 1 protein-coding common_peak2_27_140_0.147013397619132_7.21305805120836_0.488924577005941 chr8 88305402 88306459 + 0.488924577005941 NA intron (NM_001037724, intron 3 of 27) intron (NM_001037724, intron 3 of 27) 11726 NM_001037724 11513 Mm.288206 NM_007406 ENSMUSG00000031659 Adcy7 AA407758 adenylate cyclase 7 protein-coding common_peak1_76_571_-0.0831497960053227_9.11829643877573_0.488883807825337 chr11 101170734 101171468 + 0.488883807825337 NA 5' UTR (NM_146030, exon 1 of 13) 5' UTR (NM_146030, exon 1 of 13) 201 NM_146030 217198 Mm.273254 NM_146030 ENSMUSG00000035172 Plekhh3 BC020025 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 protein-coding common_peak2_76_571_-0.0831497960053227_9.11829643877573_0.488883807825337 chr15 100468286 100469650 + 0.488883807825337 NA promoter-TSS (NM_134093) promoter-TSS (NM_134093) -66 NM_134093 68614 Mm.275272 NM_134093 ENSMUSG00000037353 Letmd1 1110019O13Rik|AI593524|BB130465|BB235638|HCCR-2|HCCR1|MCC-32|Mccr LETM1 domain containing 1 protein-coding common_peak2_53_374_-0.101926907357292_8.4997833317046_0.488781148509904 chr19 24965678 24967212 + 0.488781148509904 NA Intergenic Intergenic -4829 NM_146097 226043 Mm.272127 NM_146097 ENSMUSG00000024878 Cbwd1 AV349248|BC018472 COBW domain containing 1 protein-coding common_peak2_68_501_-0.0889482337039773_8.92706943709878_0.488746210390606 chr19 24983307 24985310 + 0.488746210390606 NA Intergenic Intergenic -15221 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 protein-coding common_peak2_141_1100_0.0551731034690039_10.1321853052989_0.488384719725322 chr7 114253847 114255557 + 0.488384719725322 NA promoter-TSS (NM_033370) promoter-TSS (NM_033370) -22 NM_033370 70349 Mm.277024 NM_033370 ENSMUSG00000030754 Copb1 2610019B04Rik coatomer protein complex, subunit beta 1 protein-coding common_peak2_168_1367_0.0499613336435125_10.4428331817077_0.488380864004791 chr6 117899538 117901690 + 0.488380864004791 NA intron (NM_001166432, intron 1 of 3) MLT2F|LTR|ERVL 274 NM_001166432 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding unique_peak2_22_138_-0.180480268629998_7.02870093840851_0.488329079088269 chr10 122817338 122818529 + 0.488329079088269 NA intron (NM_176919, intron 4 of 8) MER5A|DNA|hAT-Charlie 138618 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak1_22_138_-0.180480268629998_7.02870093840851_0.488329079088269 chr12 12246583 12247198 + 0.488329079088269 NA Intergenic Intergenic -15249 NM_029758 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding common_peak1_84_578_0.0742223098632557_9.21453069292086_0.488223321640318-2 chr12 102291314 102292837 + 0.488223321640318 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 8434 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_84_578_0.0742223098632557_9.21453069292086_0.488223321640318 chr1 39367884 39368939 + 0.488223321640318 NA intron (NM_001252218, intron 1 of 3) CpG 560 NM_001252218 114641 Mm.379302 NM_053257 ENSMUSG00000073702 Rpl31 Dts ribosomal protein L31 protein-coding common_peak1_131_1004_0.0575647839672992_10.0017621780499_0.487895622459268 chr12 108630581 108632873 + 0.487895622459268 NA intron (NM_001163395, intron 1 of 12) ORR1E|LTR|ERVL-MaLR -4026 NM_001163396 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774 Ena-vasodilator stimulated phosphoprotein protein-coding common_peak2_174_1428_0.048761100306038_10.5051707512488_0.487848609073377 chr2 178326526 178330469 + 0.487848609073377 NA intron (NM_001177789, intron 9 of 12) intron (NM_001177789, intron 9 of 12) 79161 NM_177191 320558 Mm.70781 NM_177191 ENSMUSG00000060445 Sycp2 3830402K23Rik|4930518F03Rik synaptonemal complex protein 2 protein-coding common_peak1_174_1428_0.048761100306038_10.5051707512488_0.487848609073377 chr6 108570012 108572133 + 0.487848609073377 NA Intergenic Intergenic 52095 NR_040757 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_60_380_0.090872263553651_8.61908331927015_0.487821747307319 chr13 55105262 55106017 + 0.487821747307319 NA intron (NM_012017, intron 1 of 6) CpG 330 NM_012017 26919 Mm.22795 NM_012017 ENSMUSG00000021481 Zfp346 Jaz|Znf346 zinc finger protein 346 protein-coding common_peak1_126_957_0.0583288484378652_9.93304626995511_0.487756990146441 chr12 10390675 10391770 + 0.487756990146441 NA exon (NM_023697, exon 1 of 2) exon (NM_023697, exon 1 of 2) 442 NM_023697 105014 Mm.119343 NM_023697 ENSMUSG00000020621 Rdh14 3110030G19Rik|AW215439|PAN2 retinol dehydrogenase 14 (all-trans and 9-cis) protein-coding common_peak2_137_1149_-0.0582105143985867_10.1383128886324_0.487553403927468 chr8 69790391 69792129 + 0.487553403927468 NA promoter-TSS (NM_133224) promoter-TSS (NM_133224) 97 NM_133224 170759 Mm.186066 NM_133224 ENSMUSG00000031862 Atp13a1 Atp13a|Cgi152|catp ATPase type 13A1 protein-coding common_peak1_93_656_0.0699938382900456_9.39474647946735_0.487544789329974 chr8 84687254 84688126 + 0.487544789329974 NA 5' UTR (NM_025788, exon 1 of 6) 5' UTR (NM_025788, exon 1 of 6) 172 NM_025788 66830 Mm.289698 NM_025788 ENSMUSG00000001910 Nacc1 2010001H03Rik|4930511N13Rik|Btbd14b|Nac1 nucleus accumbens associated 1, BEN and BTB (POZ) domain containing protein-coding common_peak2_180_1490_0.0471427731929186_10.5656359288799_0.48737992230017 chr13 14038630 14040569 + 0.48737992230017 NA promoter-TSS (NM_178337) promoter-TSS (NM_178337) 39 NR_130788 70430 Mm.260209 NM_178337 ENSMUSG00000039233 Tbce 2610206D02Rik|C530005D02Rik|pmn tubulin-specific chaperone E protein-coding common_peak1_30_160_0.13576532661969_7.39879954142446_0.487327311772241-2 chr19 60860866 60861435 + 0.487327311772241 NA intron (NM_053198, intron 1 of 13) intron (NM_053198, intron 1 of 13) 280 NM_053198 94281 Mm.48179 NM_053198 ENSMUSG00000063698 Sfxn4 - sideroflexin 4 protein-coding common_peak2_30_160_0.13576532661969_7.39879954142446_0.487327311772241 chr10 80625728 80626819 + 0.487327311772241 NA intron (NM_134002, intron 1 of 10) intron (NM_134002, intron 1 of 10) -3383 NM_001159591 103236 Mm.29873 NM_134002 ENSMUSG00000003345 Csnk1g2 2810429I12Rik|AI463719 casein kinase 1, gamma 2 protein-coding common_peak2_30_160_0.13576532661969_7.39879954142446_0.487327311772241-2 chr2 84481348 84482020 + 0.487327311772241 NA Intergenic MLTR18B_MM|LTR|ERVK -4909 NM_001177320 21788 Mm.124316 NM_011576 ENSMUSG00000027082 Tfpi A630013F22Rik|AW552122|EPI|LACI tissue factor pathway inhibitor protein-coding common_peak1_30_160_0.13576532661969_7.39879954142446_0.487327311772241 chr11 98467428 98468066 + 0.487327311772241 NA intron (NM_011771, intron 7 of 7) intron (NM_011771, intron 7 of 7) 20913 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak2_30_160_0.13576532661969_7.39879954142446_0.487327311772241-3 chr5 34272604 34273394 + 0.487327311772241 NA intron (NM_001015039, intron 1 of 12) intron (NM_001015039, intron 1 of 12) 15325 NM_001015039 231125 Mm.113388 NM_001015039 ENSMUSG00000037224 Zfyve28 9630058O20Rik|Gm146|mKIAA1643 zinc finger, FYVE domain containing 28 protein-coding common_peak2_153_1311_-0.0542181526586614_10.3304429282888_0.487323158006621 chr5 74067704 74069489 + 0.487323158006621 NA promoter-TSS (NM_177561) promoter-TSS (NM_177561) -185 NM_177561 69727 Mm.48795 NM_177561 ENSMUSG00000054814 Usp46 1190009E20Rik|2410018I08Rik|AI451644 ubiquitin specific peptidase 46 protein-coding common_peak2_33_180_0.130302685077321_7.56499722962187_0.487226608555815-2 chr4 119738352 119739548 + 0.487226608555815 NA Intergenic Intergenic -75728 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak1_33_180_0.130302685077321_7.56499722962187_0.487226608555815 chr15 76656995 76657520 + 0.487226608555815 NA promoter-TSS (NM_001276321) promoter-TSS (NM_001276321) -356 NM_001276321 54151 Mm.247752 NM_019396 ENSMUSG00000053929 Cyhr1 1110031M01Rik|AU042374|Chrp cysteine and histidine rich 1 protein-coding unique_peak2_33_180_0.130302685077321_7.56499722962187_0.487226608555815 chr5 29894222 29895692 + 0.487226608555815 NA intron (NR_105781, intron 1 of 2) MLT1O|LTR|ERVL-MaLR 105946 NR_105781 102465962 NR_105781 ENSMUSG00000098448 Mir6362 Gm27812|mmu-mir-6362 microRNA 6362 ncRNA common_peak2_33_180_0.130302685077321_7.56499722962187_0.487226608555815 chr3 10350655 10351353 + 0.487226608555815 NA intron (NM_025512, intron 1 of 7) intron (NM_025512, intron 1 of 7) 297 NM_025512 66361 Mm.371617 NM_025512 ENSMUSG00000039795 Zfand1 2310008M20Rik|AW048890 zinc finger, AN1-type domain 1 protein-coding common_peak1_255_2421_-0.039280641823737_11.2223428287825_0.487187739011695 chr14 79480453 79482733 + 0.487187739011695 NA promoter-TSS (NM_018765) promoter-TSS (NM_018765) -325 NM_018765 22380 Mm.476813 NM_018765 ENSMUSG00000022023 Wbp4 AW545037|BB101031|FBP21 WW domain binding protein 4 protein-coding common_peak1_76_510_0.079542059835445_9.03695051085534_0.487181533759757 chr8 124344263 124345572 + 0.487181533759757 NA 3' UTR (NM_139272, exon 16 of 16) 3' UTR (NM_139272, exon 16 of 16) 89019 NM_171824 209966 Mm.234233 NM_171824 ENSMUSG00000050751 Pgbd5 2900019M05Rik|AI854313 piggyBac transposable element derived 5 protein-coding common_peak2_76_510_0.079542059835445_9.03695051085534_0.487181533759757 chr7 141099235 141100877 + 0.487181533759757 NA intron (NM_023059, intron 1 of 9) CpG 490 NM_023059 24058 Mm.38017 NM_023059 ENSMUSG00000025494 Sigirr AI256711|TIR8 single immunoglobulin and toll-interleukin 1 receptor (TIR) domain protein-coding common_peak2_216_1867_0.0429395742901146_10.8887485268547_0.487138666385193 chr12 110590504 110592572 + 0.487138666385193 NA non-coding (NR_033340, exon 1 of 1) non-coding (NR_033340, exon 1 of 1) 164 NR_033340 319786 Mm.129691 NR_033340 B930059L03Rik - RIKEN cDNA B930059L03 gene ncRNA common_peak2_64_412_0.0869165489134502_8.73345624587617_0.487078065670648 chr6 54774728 54776117 + 0.487078065670648 NA Intergenic PB1D7|SINE|Alu -41494 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_103_818_-0.0690737746273644_9.64318275432733_0.486959393454727 chr19 10576864 10578118 + 0.486959393454727 NA promoter-TSS (NM_028411) promoter-TSS (NM_028411) -105 NR_126092 72982 Mm.391194 NM_028411 ENSMUSG00000024666 Tmem138 1700113I01Rik|2900055D14Rik transmembrane protein 138 protein-coding common_peak2_68_444_0.0849337943930344_8.84012842305028_0.486914230300623 chr6 22355186 22356887 + 0.486914230300623 NA promoter-TSS (NM_138587) promoter-TSS (NM_138587) 45 NM_138587 27999 Mm.490307 NM_138587 ENSMUSG00000029672 Fam3c D6Wsu176e|Ilei family with sequence similarity 3, member C protein-coding common_peak2_261_2361_0.0379063236360722_11.2247464112152_0.486876549962888 chr18 46740272 46743691 + 0.486876549962888 NA promoter-TSS (NM_026217) promoter-TSS (NM_026217) 105 NM_001303015 11777 Mm.312536 NM_009681 ENSMUSG00000024480 Ap3s1 - adaptor-related protein complex 3, sigma 1 subunit protein-coding common_peak1_89_621_0.0720201786203845_9.3167808594408_0.48651999925069 chr19 4187842 4189337 + 0.48651999925069 NA intron (NM_178650, intron 6 of 9) intron (NM_178650, intron 6 of 9) 2458 NM_178650 108995 Mm.288312 NM_178650 ENSMUSG00000040247 Tbc1d10c 1810062O14Rik|AI428527 TBC1 domain family, member 10c protein-coding common_peak2_347_3512_-0.0324654081838069_11.7622551571305_0.486360693011809 chr10 93441475 93449205 + 0.486360693011809 NA Intergenic Intergenic -8056 NM_001313897 16993 Mm.271071 NM_008517 ENSMUSG00000015889 Lta4h - leukotriene A4 hydrolase protein-coding common_peak2_423_4291_0.0281443382456583_12.0815065298794_0.486314645391143 chr5 134610494 134616408 + 0.486314645391143 NA intron (NM_022964, intron 1 of 11) RSINE1|SINE|B4 1574 NM_022964 56743 Mm.391375 NM_020044 ENSMUSG00000040751 Lat2 AW125574|LAB|NTAL|WSCR5|Wbscr15|Wbscr5 linker for activation of T cells family, member 2 protein-coding common_peak1_61_441_-0.0946080434707692_8.74059853765605_0.486207375149353 chr10 127325976 127326870 + 0.486207375149353 NA exon (NM_001285785, exon 7 of 16) exon (NM_001285785, exon 7 of 16) 2696 NM_146011 216445 Mm.227198 NM_146011 ENSMUSG00000040345 Arhgap9 AU043488 Rho GTPase activating protein 9 protein-coding common_peak2_164_1327_0.0503861031922757_10.4002324829431_0.486201557879442 chr12 108892691 108894827 + 0.486201557879442 NA promoter-TSS (NM_177602) promoter-TSS (NM_177602) 415 NM_001164314 22375 Mm.38433 NM_011710 ENSMUSG00000021266 Wars TrpRS|WRS tryptophanyl-tRNA synthetase protein-coding common_peak2_50_350_-0.107656443177104_8.40149899871601_0.486093752714141 chr7 29155356 29156411 + 0.486093752714141 NA intron (NM_001146023, intron 2 of 7) CpG-12933 327 NM_001146023 73833 Mm.260890 NM_028661 ENSMUSG00000030590 Fam98c 1110006G06Rik|AI836081|AV026483|B230110F21Rik family with sequence similarity 98, member C protein-coding common_peak1_117_873_0.0606492467275821_9.80181409286439_0.486076066289539 chr14 45218889 45220687 + 0.486076066289539 NA promoter-TSS (NM_027518) promoter-TSS (NM_027518) 71 NM_027518 70713 Mm.343793 NM_027518 ENSMUSG00000049092 Gpr137c 6330416L11Rik|Gm908|TM7SF1L2 G protein-coupled receptor 137C protein-coding common_peak2_117_873_0.0606492467275821_9.80181409286439_0.486076066289539 chr2 73468865 73472201 + 0.486076066289539 NA intron (NM_153138, intron 1 of 7) intron (NM_153138, intron 1 of 7) 15220 NM_001289723 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak2_77_580_-0.0828385926103117_9.14097505709937_0.485888036613847 chr2 59646183 59648306 + 0.485888036613847 NA intron (NM_198294, intron 2 of 26) intron (NM_198294, intron 2 of 26) 475 NM_001290659 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding common_peak1_77_580_-0.0828385926103117_9.14097505709937_0.485888036613847 chr10 88200945 88201607 + 0.485888036613847 NA exon (NM_026070, exon 1 of 7) exon (NM_026070, exon 1 of 7) 179 NM_027487 67282 Mm.208465 NM_026070 ENSMUSG00000020056 Washc3 2900091E11Rik|5730495F03Rik|Ccdc53 WASH complex subunit 3 protein-coding common_peak2_73_544_-0.0837164572665223_9.04825419103103_0.485773581818934-2 chr5 105442728 105444170 + 0.485773581818934 NA intron (NM_001033550, intron 1 of 4) intron (NM_001033550, intron 1 of 4) 27674 NM_001033550 433926 Mm.439781 NM_001033550 ENSMUSG00000070639 Lrrc8b R75581|Ta-lrrp|mKIAA0231 leucine rich repeat containing 8 family, member B protein-coding common_peak2_73_544_-0.0837164572665223_9.04825419103103_0.485773581818934 chr17 46030449 46032893 + 0.485773581818934 NA exon (NM_001025250, exon 1 of 8) exon (NM_001025250, exon 1 of 8) 706 NM_001287058 22339 Mm.282184 NM_009505 ENSMUSG00000023951 Vegfa Vegf|Vpf vascular endothelial growth factor A protein-coding common_peak2_148_1168_0.0538657875759654_10.2179921083196_0.485721026550023 chr15 76189031 76191354 + 0.485721026550023 NA exon (NM_001163549, exon 13 of 33) exon (NM_001163549, exon 13 of 33) 5518 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_69_509_-0.0862954111489689_8.95120573128438_0.485708467422777 chr11 19989375 19990454 + 0.485708467422777 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 65472 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_40_270_-0.120705776288445_8.02179615320965_0.485592771685708 chr18 37969212 37969845 + 0.485592771685708 NA intron (NM_175684, intron 1 of 19) intron (NM_175684, intron 1 of 19) 203 NM_175684 319262 Mm.285060 NM_175684 ENSMUSG00000038524 Fchsd1 A030002D08Rik FCH and double SH3 domains 1 protein-coding common_peak2_40_270_-0.120705776288445_8.02179615320965_0.485592771685708 chr11 82746576 82747596 + 0.485592771685708 NA intron (NM_009839, intron 5 of 13) intron (NM_009839, intron 5 of 13) 17235 NM_009839 12467 Mm.4126 NM_009839 ENSMUSG00000020698 Cct6b CCT-zeta-2|CCTzeta-2|Cctz-2|TCP-1-zeta-2 chaperonin containing Tcp1, subunit 6b (zeta) protein-coding unique_peak2_40_270_-0.120705776288445_8.02179615320965_0.485592771685708 chr3 79252436 79253942 + 0.485592771685708 NA intron (NR_045502, intron 2 of 2) intron (NR_045502, intron 2 of 2) 40270 NR_045502 70924 Mm.444622 NR_045502 ENSMUSG00000104585 4921511C10Rik - RIKEN cDNA 4921511C10 gene ncRNA common_peak2_25_159_-0.166506850246431_7.23867466976415_0.485188037582416 chr13 63249018 63250164 + 0.485188037582416 NA intron (NM_001289924, intron 13 of 16) intron (NM_001289924, intron 13 of 16) 9562 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_15_91_-0.227308692931845_6.40990760959109_0.485119537398548-2 chr2 166632158 166632553 + 0.485119537398548 NA intron (NM_177782, intron 5 of 39) intron (NM_177782, intron 5 of 39) -40363 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak2_17_79_0.182757266985305_6.41330672838001_0.485119537398548 chr11 98907717 98908282 + 0.485119537398548 NA promoter-TSS (NM_011799) promoter-TSS (NM_011799) 110 NM_001025779 23834 Mm.20912 NM_011799 ENSMUSG00000017499 Cdc6 CDC18L cell division cycle 6 protein-coding common_peak1_17_79_0.182757266985305_6.41330672838001_0.485119537398548-4 chr5 62753217 62753649 + 0.485119537398548 NA intron (NM_178407, intron 1 of 32) B1_Mus1|SINE|Alu 12744 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_17_79_0.182757266985305_6.41330672838001_0.485119537398548-3 chr14 63605983 63606412 + 0.485119537398548 NA promoter-TSS (NM_173393) promoter-TSS (NM_173393) -333 NM_173393 219149 Mm.32071 NM_173393 ENSMUSG00000035067 Xkr6 2700008G24Rik|BC024502|Xrg6 X-linked Kx blood group related 6 protein-coding unique_peak2_15_91_-0.227308692931845_6.40990760959109_0.485119537398548 chr7 4663574 4664442 + 0.485119537398548 NA intron (NM_024172, intron 6 of 7) B3|SINE|B2 -5058 NM_172894 243819 Mm.258670 NM_172894 ENSMUSG00000052296 Ppp6r1 2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115 protein phosphatase 6, regulatory subunit 1 protein-coding unique_peak2_17_79_0.182757266985305_6.41330672838001_0.485119537398548-2 chr19 10266468 10267342 + 0.485119537398548 NA intron (NM_198114, intron 5 of 19) intron (NM_198114, intron 5 of 19) -26157 NM_001033481 225908 Mm.329716 NM_001033481 ENSMUSG00000036098 Myrf 6030439E18|Gm1804|Gm98|Mrf myelin regulatory factor protein-coding common_peak1_15_91_-0.227308692931845_6.40990760959109_0.485119537398548 chr1 193160220 193160629 + 0.485119537398548 NA intron (NM_016851, intron 2 of 7) intron (NM_016851, intron 2 of 7) 7312 NM_016851 54139 Mm.273695 NM_016851 ENSMUSG00000026638 Irf6 AI876454|E230028I05Rik|mirf6 interferon regulatory factor 6 protein-coding unique_peak2_17_79_0.182757266985305_6.41330672838001_0.485119537398548 chr18 26005513 26006358 + 0.485119537398548 NA Intergenic MMVL30-int|LTR|ERV1 -251952 NM_001174074 108013 Mm.266435 NM_133195 ENSMUSG00000024268 Celf4 A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik CUGBP, Elav-like family member 4 protein-coding common_peak1_17_79_0.182757266985305_6.41330672838001_0.485119537398548 chr10 12823356 12823792 + 0.485119537398548 NA intron (NM_011682, intron 1 of 73) intron (NM_011682, intron 1 of 73) 38161 NM_011682 22288 Mm.331784 NM_011682 ENSMUSG00000019820 Utrn AA589569|DRP|Dmdl utrophin protein-coding unique_peak2_15_91_-0.227308692931845_6.40990760959109_0.485119537398548-2 chrX 42360236 42361011 + 0.485119537398548 NA Intergenic Intergenic -141942 NM_011364 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak1_17_79_0.182757266985305_6.41330672838001_0.485119537398548-2 chr12 12287792 12288346 + 0.485119537398548 NA intron (NM_029758, intron 2 of 12) intron (NM_029758, intron 2 of 12) 25930 NM_001146119 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding common_peak1_364_3721_-0.0314377267952022_11.8461434766615_0.485091103056231 chr4 139197527 139201762 + 0.485091103056231 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 5533 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_104_827_-0.0679067268225051_9.65953359408807_0.484889315075471 chr13 38959860 38960997 + 0.484889315075471 NA promoter-TSS (NR_131019) promoter-TSS (NR_131019) 109 NM_001170430 108652 Mm.255506 NM_134060 ENSMUSG00000021432 Slc35b3 4921526O06Rik|AI428480|CGI-19|PABST2|PAPST2 solute carrier family 35, member B3 protein-coding common_peak1_22_109_0.15710109056885_6.85991025880909_0.484593477592807 chr11 4251020 4251479 + 0.484593477592807 NA Intergenic Intergenic -6319 NM_008501 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak2_113_836_0.0620272181861878_9.74009742164344_0.484413871975067 chr2 117120313 117122113 + 0.484413871975067 NA 5' UTR (NM_001277256, exon 1 of 5) 5' UTR (NM_001277256, exon 1 of 5) 142 NM_033524 114715 Mm.245890 NM_033524 ENSMUSG00000027351 Spred1 5730461F13Rik|AL024345|AW047647 sprouty protein with EVH-1 domain 1, related sequence protein-coding common_peak1_37_247_-0.127219795803629_7.89058641248506_0.484331024851086 chr11 70618322 70619243 + 0.484331024851086 NA exon (NM_009603, exon 2 of 12) exon (NM_009603, exon 2 of 12) 412 NM_009603 11448 Mm.4980 NM_009603 ENSMUSG00000014609 Chrne AChrepsilon|Acre|nAChRE cholinergic receptor, nicotinic, epsilon polypeptide protein-coding common_peak2_37_247_-0.127219795803629_7.89058641248506_0.484331024851086 chr16 30008517 30009788 + 0.484331024851086 NA intron (NR_033631, intron 1 of 2) CpG 485 NR_033631 100043102 Mm.30797 NR_033631 ENSMUSG00000097184 4632428C04Rik Gm4231 RIKEN cDNA 4632428C04 gene ncRNA common_peak1_47_325_-0.108340374952625_8.29455796675476_0.484278267314375 chr10 41972540 41973532 + 0.484278267314375 NA intron (NM_001034858, intron 7 of 17) intron (NM_001034858, intron 7 of 17) 45346 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak2_128_976_0.0576469344388482_9.96103821918781_0.484196209028455 chr12 85685902 85687733 + 0.484196209028455 NA promoter-TSS (NM_016767) promoter-TSS (NM_016767) 97 NM_016767 53314 Mm.6672 NM_016767 ENSMUSG00000034266 Batf B-ATF|SFA-2 basic leucine zipper transcription factor, ATF-like protein-coding common_peak2_43_251_0.10913013038039_8.03184498869011_0.484180439384295 chr2 151494191 151495086 + 0.484180439384295 NA intron (NM_001291074, intron 1 of 8) CpG 456 NM_198326 386649 Mm.419479 NM_198326 ENSMUSG00000027455 Nsfl1c Munc-18c|Stxbp3a|p47 NSFL1 (p97) cofactor (p47) protein-coding common_peak1_61_388_0.0896681709344698_8.64846043045343_0.484093908882116 chr10 31313347 31314168 + 0.484093908882116 NA intron (NM_027168, intron 1 of 5) CpG 352 NM_027168 69692 Mm.245537 NM_027168 ENSMUSG00000000295 Hddc2 2310057G13Rik HD domain containing 2 protein-coding common_peak1_28_180_-0.151182572570637_7.42425460079789_0.484065770179573 chr6 130237364 130238050 + 0.484065770179573 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -4385 NM_001110323 16638 Mm.441781 NM_014194 ENSMUSG00000067599 Klra7 LGL-1|Ly-49G.1|Ly-49G.2|Ly-49G.3|Ly49G.4|Ly49g|Ly49g1|Ly49g2 killer cell lectin-like receptor, subfamily A, member 7 protein-coding unique_peak2_28_180_-0.151182572570637_7.42425460079789_0.484065770179573 chrX 57304413 57305665 + 0.484065770179573 NA intron (NM_152801, intron 2 of 21) intron (NM_152801, intron 2 of 21) 33690 NM_152801 73341 Mm.261443 NM_152801 ENSMUSG00000031133 Arhgef6 1600028C08Rik|1700038J06Rik|4930592P22Rik|alpha-PIX Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak2_160_1287_0.051080035244361_10.3564568957368_0.48405325629119 chr17 50569535 50572813 + 0.48405325629119 NA intron (NM_013880, intron 1 of 5) MTD|LTR|ERVL-MaLR 61627 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak1_150_1279_-0.0534077099018102_10.2952242399365_0.483955650641696 chr9 32910959 32912861 + 0.483955650641696 NA intron (NR_131058, intron 2 of 3) intron (NR_131058, intron 2 of 3) 17056 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak2_293_2862_-0.0356888907490305_11.4654675096248_0.483852925542701 chr2 27026587 27029873 + 0.483852925542701 NA promoter-TSS (NM_172659) promoter-TSS (NM_172659) -232 NM_001177627 227659 Mm.41203 NM_172659 ENSMUSG00000036067 Slc2a6 A330096C23|F630103L12Rik|Glut6|Glut9 solute carrier family 2 (facilitated glucose transporter), member 6 protein-coding common_peak2_34_224_-0.132335476693504_7.74761345287029_0.483817411547456 chr1 52363692 52364802 + 0.483817411547456 NA Intergenic Intergenic -131015 NM_001113383 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding common_peak1_34_224_-0.132335476693504_7.74761345287029_0.483817411547456 chr5 62759474 62760190 + 0.483817411547456 NA intron (NM_178407, intron 1 of 32) intron (NM_178407, intron 1 of 32) 6345 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak2_69_452_0.0846907856636552_8.86571263287806_0.483722115610822 chr15 82127059 82128720 + 0.483722115610822 NA promoter-TSS (NM_172428) promoter-TSS (NM_172428) -33 NM_172428 76457 Mm.440373 NM_172428 ENSMUSG00000068114 Ccdc134 2310042L06Rik|AW208859 coiled-coil domain containing 134 protein-coding common_peak1_184_1634_-0.047185682295714_10.6514820792376_0.483614487935666 chr11 75152432 75154408 + 0.483614487935666 NA intron (NM_001002764, intron 15 of 18) intron (NM_001002764, intron 15 of 18) 14732 NM_001098203 15248 Mm.57250 NM_010430 ENSMUSG00000043099 Hic1 AA408311|HIC-1 hypermethylated in cancer 1 protein-coding common_peak1_207_1772_0.0432813573013107_10.8136174995493_0.483551800019964 chr2 103681653 103684148 + 0.483551800019964 NA intron (NM_178890, intron 2 of 16) intron (NM_178890, intron 2 of 16) 78350 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding unique_peak2_31_202_-0.142470342873652_7.59410074574835_0.48336478063601 chr6 86594073 86595647 + 0.48336478063601 NA Intergenic MTEa|LTR|ERVL-MaLR -33314 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak2_104_754_0.0652473964643772_9.59295653244463_0.483315182545553 chr13 8884956 8886434 + 0.483315182545553 NA promoter-TSS (NM_145360) promoter-TSS (NM_145360) 89 NM_145360 319554 Mm.29847 NM_145360 ENSMUSG00000058258 Idi1 4832416K17Rik isopentenyl-diphosphate delta isomerase protein-coding common_peak1_273_2628_-0.037348558896829_11.3416241471696_0.483287968225274 chr12 16582760 16585813 + 0.483287968225274 NA intron (NM_172950, intron 1 of 19) intron (NM_172950, intron 1 of 19) 5484 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak1_145_1229_-0.0555112626546155_10.2366869688993_0.483271460493425 chr18 84293034 84294691 + 0.483271460493425 NA intron (NM_001033341, intron 8 of 8) intron (NM_001033341, intron 8 of 8) 205704 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding common_peak1_145_1229_-0.0555112626546155_10.2366869688993_0.483271460493425-2 chr8 71675901 71677930 + 0.483271460493425 NA intron (NM_010589, intron 1 of 24) intron (NM_010589, intron 1 of 24) 532 NM_010589 16453 Mm.249645 NM_010589 ENSMUSG00000031805 Jak3 fae|wil Janus kinase 3 protein-coding common_peak2_155_1238_0.0512075998399713_10.3005642720606_0.483230250226784 chr2 65237446 65240041 + 0.483230250226784 NA promoter-TSS (NM_027225) promoter-TSS (NM_027225) -117 NM_027225 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak2_58_416_-0.0983771684028376_8.65471498924324_0.483185086989683 chr12 110888209 110889977 + 0.483185086989683 NA promoter-TSS (NM_026048) promoter-TSS (NM_026048) 52 NM_027223 67236 Mm.287157 NM_026048 ENSMUSG00000021276 Cinp 1810047K05Rik|2810452K22Rik cyclin-dependent kinase 2 interacting protein protein-coding common_peak1_58_416_-0.0983771684028376_8.65471498924324_0.483185086989683 chr17 78248267 78249602 + 0.483185086989683 NA intron (NM_015800, intron 2 of 16) intron (NM_015800, intron 2 of 16) 48686 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding unique_peak2_20_124_-0.188309640863589_6.87162946423029_0.483022674584033 chr2 105429901 105430760 + 0.483022674584033 NA Intergenic Intergenic -31011 NM_009037 19672 Mm.4876 NM_009037 ENSMUSG00000005973 Rcn1 Rcn reticulocalbin 1 protein-coding common_peak1_20_124_-0.188309640863589_6.87162946423029_0.483022674584033-2 chr11 60192112 60192570 + 0.483022674584033 NA intron (NM_001037764, intron 2 of 4) intron (NM_001037764, intron 2 of 4) 8276 NR_105886 102465555 NR_105886 ENSMUSG00000098547 Mir6921 Gm27352|mmu-mir-6921 microRNA 6921 ncRNA common_peak1_20_124_-0.188309640863589_6.87162946423029_0.483022674584033 chr1 152597440 152597900 + 0.483022674584033 NA intron (NM_016846, intron 2 of 17) intron (NM_016846, intron 2 of 17) 27441 NM_016846 19731 Mm.245270 NM_016846 ENSMUSG00000026482 Rgl1 Rgl|mKIAA0959 ral guanine nucleotide dissociation stimulator,-like 1 protein-coding common_peak1_172_1408_0.0487546351829131_10.4848332139011_0.483018109559022 chr4 149306740 149308578 + 0.483018109559022 NA promoter-TSS (NM_008441) promoter-TSS (NM_008441) 39 NM_207682 16561 Mm.402393 NM_008441 ENSMUSG00000063077 Kif1b A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204 kinesin family member 1B protein-coding common_peak1_86_595_0.0736293102036907_9.25598317556401_0.48301378860841 chr14 20702375 20703508 + 0.48301378860841 NA promoter-TSS (NM_025366) promoter-TSS (NM_025366) -86 NM_025366 66121 Mm.246996 NM_025366 ENSMUSG00000063787 Chchd1 1110001O19Rik|2400010G13Rik|MRP-S37 coiled-coil-helix-coiled-coil-helix domain containing 1 protein-coding common_peak2_140_1178_-0.0560823994004593_10.1753068032795_0.482873611162021 chr19 44930178 44931998 + 0.482873611162021 NA promoter-TSS (NM_001081225) promoter-TSS (NM_001081225) -31 NM_001081225 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Fam178a 3632432H19|6030443O07Rik|AU014917|Slf2 family with sequence similarity 178, member A protein-coding common_peak2_105_836_-0.0667297359208749_9.67571894458991_0.48286482821138 chr18 56973610 56975914 + 0.48286482821138 NA intron (NM_029909, intron 1 of 4) intron (NM_029909, intron 1 of 4) 617 NM_029909 77422 Mm.256874 NM_029909 ENSMUSG00000024592 C330018D20Rik AU018666 RIKEN cDNA C330018D20 gene protein-coding common_peak1_62_449_-0.092172031265255_8.76769517558441_0.482804623635571 chr16 13780060 13781259 + 0.482804623635571 NA promoter-TSS (NM_001039521) promoter-TSS (NM_001039521) -40 NM_001039521 106298 Mm.288606 NM_001039521 ENSMUSG00000022682 Rrn3 AL023001|E130302O19Rik|R75565|TIF-1A|Tif1a RRN3 RNA polymerase I transcription factor homolog (yeast) protein-coding common_peak1_40_229_0.115953214121051_7.9034666580049_0.482796225126649 chr11 96777105 96777668 + 0.482796225126649 NA intron (NM_028965, intron 1 of 8) intron (NM_028965, intron 1 of 8) 169 NM_028965 74479 Mm.270781 NM_028965 ENSMUSG00000020876 Snx11 4933439F10Rik|A930041K09Rik|AI117694 sorting nexin 11 protein-coding common_peak1_95_674_0.0682563985266142_9.4328718912015_0.482685233683375 chr5 115272404 115273102 + 0.482685233683375 NA 5' UTR (NM_001302449, exon 1 of 17) 5' UTR (NM_001302449, exon 1 of 17) 142 NM_016698 50849 Mm.30051 NM_016698 ENSMUSG00000041740 Rnf10 AA675014|RIE2|mKIAA0262 ring finger protein 10 protein-coding common_peak2_74_553_-0.0835924577595222_9.07194593716943_0.482682267711736 chr8 124721361 124722956 + 0.482682267711736 NA promoter-TSS (NM_145607) promoter-TSS (NM_145607) 19 NM_026855 68865 Mm.22779 NM_026855 ENSMUSG00000031982 Arv1 1110067L22Rik|AI461928|AW121084 ARV1 homolog, fatty acid homeostasis modulator protein-coding common_peak1_74_553_-0.0835924577595222_9.07194593716943_0.482682267711736 chr11 72962581 72963764 + 0.482682267711736 NA intron (NM_016745, intron 1 of 21) MIR|SINE|MIR 2003 NM_001163337 53313 Mm.6306 NM_016745 ENSMUSG00000020788 Atp2a3 SERCA3b|Serca3 ATPase, Ca++ transporting, ubiquitous protein-coding common_peak1_322_3063_0.0328958640663615_11.5976485139581_0.482655780835563 chr12 59218560 59220576 + 0.482655780835563 NA promoter-TSS (NM_001033156) promoter-TSS (NM_001033156) -85 NM_001033156 70611 Mm.311026 NM_001033156 ENSMUSG00000035329 Fbxo33 5730501N20Rik|AI642135 F-box protein 33 protein-coding common_peak1_184_1531_0.0466886561647737_10.6045449100073_0.482470805747878 chr10 39461716 39464212 + 0.482470805747878 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 93165 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak2_13_78_-0.243828309345533_6.18186659350434_0.482409833682749-3 chr8 60954137 60954711 + 0.482409833682749 NA intron (NM_007711, intron 1 of 11) intron (NM_007711, intron 1 of 11) 375 NM_173876 12725 Mm.25263 NM_007711 ENSMUSG00000004319 Clcn3 Clc3 chloride channel, voltage-sensitive 3 protein-coding unique_peak2_13_78_-0.243828309345533_6.18186659350434_0.482409833682749 chr10 111102969 111103741 + 0.482409833682749 NA Intergenic Intergenic -61447 NM_001003717 237542 Mm.220204 NM_175489 ENSMUSG00000020189 Osbpl8 AA536976|AA536995|C730029P18Rik|D330025H14Rik|ORP-8 oxysterol binding protein-like 8 protein-coding unique_peak2_13_78_-0.243828309345533_6.18186659350434_0.482409833682749-2 chr6 130418996 130419834 + 0.482409833682749 NA Intergenic Intergenic -32541 NM_016659 16627 Mm.24399 NM_016659 ENSMUSG00000079853 Klra1 A1|CH29-493D4.3|Klra22|Ly49a|Ly49o<129>|Ly49v killer cell lectin-like receptor, subfamily A, member 1 protein-coding common_peak1_13_78_-0.243828309345533_6.18186659350434_0.482409833682749-2 chr11 83542842 83543220 + 0.482409833682749 NA Intergenic ORR1B2|LTR|ERVL-MaLR -12513 NM_013653 20304 Mm.284248 NM_013653 ENSMUSG00000035042 Ccl5 MuRantes|RANTES|SISd|Scya5|TCP228 chemokine (C-C motif) ligand 5 protein-coding common_peak1_13_78_-0.243828309345533_6.18186659350434_0.482409833682749-4 chr6 120471543 120471942 + 0.482409833682749 NA intron (NM_008359, intron 1 of 12) MT2B|LTR|ERVL 8545 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak1_13_78_-0.243828309345533_6.18186659350434_0.482409833682749-3 chr14 121036490 121036888 + 0.482409833682749 NA intron (NM_134082, intron 1 of 26) intron (NM_134082, intron 1 of 26) 1115 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding common_peak1_13_78_-0.243828309345533_6.18186659350434_0.482409833682749 chr1 173767333 173767721 + 0.482409833682749 NA promoter-TSS (NM_008329) promoter-TSS (NM_008329) -608 NM_008329 15951 Mm.261270 NM_008329 ENSMUSG00000073489 Ifi204 Ifi16|p204 interferon activated gene 204 protein-coding common_peak1_54_333_0.0975867259118637_8.43249765542998_0.482337304762351 chr10 67204805 67205691 + 0.482337304762351 NA intron (NM_207221, intron 3 of 25) intron (NM_207221, intron 3 of 25) 19498 NM_001242396 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding common_peak2_54_333_0.0975867259118637_8.43249765542998_0.482337304762351 chr7 80635859 80637770 + 0.482337304762351 NA intron (NR_040343, intron 2 of 4) intron (NR_040343, intron 2 of 4) 797 NR_040343 100504375 Mm.322881 NR_040343 ENSMUSG00000084821 Gm15880 OTTMUSG00000027171 predicted gene 15880 ncRNA common_peak1_11_65_-0.257230962452714_5.9157786381321_0.482196053595805 chr4 149137035 149137374 + 0.482196053595805 NA intron (NM_027263, intron 1 of 4) ID_B1|SINE|B4 396 NM_027263 69928 Mm.260893 NM_027263 ENSMUSG00000073705 Apitd1 2610040C18Rik|2810407L01Rik|CENP-S apoptosis-inducing, TAF9-like domain 1 protein-coding common_peak1_96_752_-0.0711676913085189_9.52092220901767_0.482126348893742 chr11 106665724 106667001 + 0.482126348893742 NA intron (NM_001305158, intron 13 of 14) intron (NM_001305158, intron 13 of 14) 48919 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak2_125_1029_-0.0602071509324418_9.97832504660436_0.482016437887158 chr17 71615376 71617637 + 0.482016437887158 NA intron (NM_175639, intron 1 of 17) CpG 291 NM_175639 72515 Mm.257762 NM_175639 ENSMUSG00000041057 Wdr43 2610318G08Rik|AU020887|AV024208|Wrd43|mKIAA0007 WD repeat domain 43 protein-coding common_peak1_100_718_0.0670002331661603_9.52334807702238_0.481880080282666 chr6 54936483 54937973 + 0.481880080282666 NA intron (NM_172729, intron 7 of 11) intron (NM_172729, intron 7 of 11) 34433 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak1_51_358_-0.105806477995763_8.43493679482517_0.481813084632371 chr8 46616543 46617325 + 0.481813084632371 NA promoter-TSS (NM_009810) promoter-TSS (NM_009810) 266 NM_001001184 408022 Mm.217385 NM_001001184 ENSMUSG00000038225 Primpol BC065112|Ccdc111 primase and polymerase (DNA-directed) protein-coding common_peak2_51_358_-0.105806477995763_8.43493679482517_0.481813084632371 chr2 156391892 156393220 + 0.481813084632371 NA non-coding (NR_024329, exon 1 of 1) non-coding (NR_024329, exon 1 of 1) 423 NR_024329 347740 Mm.324242 NR_024329 2900097C17Rik 1810005K14Rik|4930563C06Rik RIKEN cDNA 2900097C17 gene ncRNA common_peak2_400_4005_0.0289362789288354_11.9824148452771_0.481470311783197 chr1 164133271 164138825 + 0.481470311783197 NA intron (NM_011347, intron 8 of 15) intron (NM_011347, intron 8 of 15) -15787 NM_007976 14067 Mm.12900 NM_007976 ENSMUSG00000026579 F5 AI173222|Cf-5|Cf5 coagulation factor V protein-coding common_peak1_25_128_0.144193989217678_7.08332425003209_0.481410466069897-2 chr14 26358979 26359448 + 0.481410466069897 NA intron (NR_038005, intron 1 of 7) intron (NR_038005, intron 1 of 7) 1666 NR_038005 71106 Mm.158564 NR_038005 ENSMUSG00000021874 4933413J09Rik GCSE RIKEN cDNA 4933413J09 gene ncRNA common_peak1_25_128_0.144193989217678_7.08332425003209_0.481410466069897-3 chr2 163710812 163711333 + 0.481410466069897 NA intron (NM_001277096, intron 2 of 3) intron (NM_001277096, intron 2 of 3) 17035 NM_011106 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding unique_peak2_25_128_0.144193989217678_7.08332425003209_0.481410466069897 chr4 135090159 135091113 + 0.481410466069897 NA Intergenic Intergenic -30009 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak1_25_128_0.144193989217678_7.08332425003209_0.481410466069897 chr10 80680707 80681261 + 0.481410466069897 NA Intergenic Intergenic -4691 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak2_179_1480_0.0470473346484965_10.5558795926131_0.481393142240076 chr10 62485775 62487931 + 0.481393142240076 NA promoter-TSS (NM_133672) promoter-TSS (NM_133672) -48 NM_133672 30930 Mm.260703 NM_133672 ENSMUSG00000020078 Vps26a AA407240|HB58|Vps26 VPS26 retromer complex component A protein-coding common_peak2_78_527_0.0777049717548621_9.08324660523589_0.481341316831366 chr18 61210857 61212186 + 0.481341316831366 NA promoter-TSS (NM_007885) promoter-TSS (NM_007885) 75 NM_007885 13521 Mm.24803 NM_007885 ENSMUSG00000034320 Slc26a2 Dtd|ST-OB solute carrier family 26 (sulfate transporter), member 2 protein-coding common_peak2_37_208_0.119617382502364_7.76716782333206_0.48129458932183 chr7 24999894 25001255 + 0.48129458932183 NA intron (NM_001290469, intron 4 of 22) intron (NM_001290469, intron 4 of 22) 5363 NM_001290469 232975 Mm.44101 NM_144921 ENSMUSG00000040907 Atp1a3 Atpa-2 ATPase, Na+/K+ transporting, alpha 3 polypeptide protein-coding unique_peak2_37_208_0.119617382502364_7.76716782333206_0.48129458932183 chrX 134808244 134809484 + 0.48129458932183 NA intron (NM_001166397, intron 1 of 5) intron (NM_001166397, intron 1 of 5) 357 NM_001166397 67416 Mm.285969 NM_026139 ENSMUSG00000033436 Armcx2 3230401N03Rik|AI043003|ALEX2 armadillo repeat containing, X-linked 2 protein-coding common_peak1_37_208_0.119617382502364_7.76716782333206_0.48129458932183-2 chr17 34135467 34136116 + 0.48129458932183 NA intron (NM_010386, intron 2 of 5) intron (NM_010386, intron 2 of 5) -9625 NM_010388 15000 Mm.195060 NM_010388 ENSMUSG00000037548 H2-DMb2 H-2Mb2|H2-Mb2 histocompatibility 2, class II, locus Mb2 protein-coding common_peak1_37_208_0.119617382502364_7.76716782333206_0.48129458932183 chr17 14961370 14961977 + 0.48129458932183 NA promoter-TSS (NM_024250) promoter-TSS (NM_024250) -413 NM_024250 72057 Mm.440085 NM_024250 ENSMUSG00000023883 Phf10 1810055P05Rik|AV024533 PHD finger protein 10 protein-coding common_peak2_37_208_0.119617382502364_7.76716782333206_0.48129458932183-2 chr8 40583703 40584843 + 0.48129458932183 NA intron (NM_001040699, intron 6 of 13) intron (NM_001040699, intron 6 of 13) 50519 NM_001040699 54384 Mm.294871 NM_019433 ENSMUSG00000039431 Mtmr7 - myotubularin related protein 7 protein-coding common_peak2_55_390_-0.0978477361030716_8.56210092925582_0.480820508880706 chr8 85036322 85037577 + 0.480820508880706 NA promoter-TSS (NM_001122843) promoter-TSS (NM_001122843) 34 NM_145390 212999 Mm.220357 NM_145390 ENSMUSG00000031691 Tnpo2 1110034O24Rik|AA414969|AI464345|AI852433|IPO3|Knpb2b|Kpnb2b|TRN2 transportin 2 (importin 3, karyopherin beta 2b) protein-coding common_peak1_58_365_0.0898265667577824_8.56061312166293_0.480820508880706 chr16 37653641 37654398 + 0.480820508880706 NA intron (NM_026610, intron 1 of 2) CpG 349 NM_026610 68194 Mm.379154 NM_026610 ENSMUSG00000022820 Ndufb4 0610006N12Rik|1300010H20Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4 protein-coding common_peak2_58_365_0.0898265667577824_8.56061312166293_0.480820508880706 chr7 120882622 120884265 + 0.480820508880706 NA intron (NM_001267711, intron 6 of 17) B1_Mur2|SINE|Alu 32254 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak2_169_1475_-0.0492228470215483_10.5028655825496_0.48075950935972 chr5 122849082 122851301 + 0.48075950935972 NA promoter-TSS (NM_030564) promoter-TSS (NM_030564) 3 NM_030564 80751 Mm.388529 NM_030564 ENSMUSG00000029474 Rnf34 AW061037|AW536122|BC004042|C88279|RIFF ring finger protein 34 protein-coding common_peak2_120_901_0.059583221380068_9.84677523394542_0.480446433014044 chr12 69415619 69418320 + 0.480446433014044 NA Intergenic Intergenic 44819 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak2_175_1538_-0.0481428400751902_10.5637060962906_0.48043938357524 chr10 79680765 79683090 + 0.48043938357524 NA promoter-TSS (NM_177613) promoter-TSS (NM_177613) -268 NM_177613 216150 Mm.21981 NM_177613 ENSMUSG00000020307 Cdc34 AI327276|UBE2R1 cell division cycle 34 protein-coding common_peak1_28_147_0.139209948883618_7.27905834007076_0.480431288700555 chr3 14888973 14889611 + 0.480431288700555 NA intron (NM_009801, intron 2 of 6) intron (NM_009801, intron 2 of 6) 2866 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding unique_peak2_28_147_0.139209948883618_7.27905834007076_0.480431288700555 chr9 75544374 75545500 + 0.480431288700555 NA intron (NM_016963, intron 1 of 9) intron (NM_016963, intron 1 of 9) 14720 NM_016963 50875 Mm.38445 NM_016963 ENSMUSG00000058587 Tmod3 U-Tmod|UTMOD tropomodulin 3 protein-coding common_peak2_87_604_0.0722310329047069_9.27690684861431_0.480371497383854 chr15 66853297 66855674 + 0.480371497383854 NA Intergenic Intergenic -22656 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_66_428_0.0857098626501784_8.78768876882463_0.480333524590192 chr2 166669636 166670786 + 0.480333524590192 NA intron (NM_177782, intron 1 of 39) intron (NM_177782, intron 1 of 39) -2507 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_70_461_0.0814105044309592_8.89245429363154_0.480259568118548 chrX 106011284 106011913 + 0.480259568118548 NA intron (NM_001190409, intron 1 of 9) CpG 301 NM_001190409 67075 Mm.275943 NM_025952 ENSMUSG00000031232 Magt1 2410001C15Rik|2610529C04Rik|2810482I07Rik|IAG2|IAP magnesium transporter 1 protein-coding common_peak2_70_461_0.0814105044309592_8.89245429363154_0.480259568118548 chr11 76178933 76180186 + 0.480259568118548 NA promoter-TSS (NM_026664) promoter-TSS (NM_026664) 71 NM_026664 68299 Mm.46397 NM_026664 ENSMUSG00000017288 Vps53 2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1 VPS53 GARP complex subunit protein-coding common_peak1_23_144_-0.16613362192284_7.09684227905352_0.480087660123505 chr19 41802732 41803340 + 0.480087660123505 NA promoter-TSS (NM_027667) promoter-TSS (NM_027667) -952 NM_027667 71085 Mm.21646 NM_027667 ENSMUSG00000025154 Arhgap19 4933411B03Rik|AI120128|AW546831|mFLJ00368 Rho GTPase activating protein 19 protein-coding common_peak1_23_144_-0.16613362192284_7.09684227905352_0.480087660123505-2 chr2 166668277 166668761 + 0.480087660123505 NA intron (NM_177782, intron 1 of 39) intron (NM_177782, intron 1 of 39) -4199 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_23_144_-0.16613362192284_7.09684227905352_0.480087660123505-3 chr9 65544653 65545296 + 0.480087660123505 NA Intergenic Intergenic 35113 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding common_peak1_180_1491_0.0461754952211244_10.5661195678658_0.480084319585404 chr2 174601641 174604411 + 0.480084319585404 NA Intergenic Intergenic -40508 NM_001099328 100043757 Mm.48711 NM_001099328 ENSMUSG00000050600 Zfp831 ENSMUSG00000050600|OTTMUSG00000017459 zinc finger protein 831 protein-coding common_peak1_41_278_-0.120034356844332_8.06410413340702_0.480070255904581 chr5 110840059 110840709 + 0.480070255904581 NA promoter-TSS (NM_153571) promoter-TSS (NM_153571) 367 NM_016681 50883 Mm.279308 NM_016681 ENSMUSG00000029521 Chek2 CHK2|Cds1|HUCDS1|Rad53 checkpoint kinase 2 protein-coding unique_peak2_15_68_0.187728806346999_6.20238885995167_0.479937426256323 chr14 31435493 31436158 + 0.479937426256323 NA exon (NM_011894, exon 1 of 9) exon (NM_011894, exon 1 of 9) 208 NM_011894 24056 Mm.383198 NM_011894 ENSMUSG00000021892 Sh3bp5 AI606498|SH3BP-5|Sab SH3-domain binding protein 5 (BTK-associated) protein-coding common_peak1_15_68_0.187728806346999_6.20238885995167_0.479937426256323 chr1 170884986 170885449 + 0.479937426256323 NA exon (NM_023173, exon 1 of 6) exon (NM_023173, exon 1 of 6) 323 NM_023173 80915 Mm.34365 NM_023173 ENSMUSG00000026659 Dusp12 1190004O14Rik|AA027408|AW049275|ENSMUSG00000045460|ESTM36|LMW-DSP4|T-DSP4|VH1|mVH1 dual specificity phosphatase 12 protein-coding unique_peak2_15_68_0.187728806346999_6.20238885995167_0.479937426256323-2 chr5 72812711 72813296 + 0.479937426256323 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) 55445 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak1_15_68_0.187728806346999_6.20238885995167_0.479937426256323-2 chr2 25540794 25541123 + 0.479937426256323 NA intron (NM_009422, intron 1 of 10) intron (NM_009422, intron 1 of 10) 5982 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding common_peak1_15_68_0.187728806346999_6.20238885995167_0.479937426256323-3 chr3 94951418 94951810 + 0.479937426256323 NA Intergenic RMER19B|LTR|ERVK -3401 NM_017395 53970 Mm.24308 NM_017395 ENSMUSG00000005774 Rfx5 - regulatory factor X, 5 (influences HLA class II expression) protein-coding unique_peak2_15_68_0.187728806346999_6.20238885995167_0.479937426256323-3 chr7 29853245 29853897 + 0.479937426256323 NA promoter-TSS (NM_173738) promoter-TSS (NM_173738) 77 NM_173738 233057 Mm.296864 NM_173738 ENSMUSG00000050855 Zfp940 - zinc finger protein 940 protein-coding unique_peak2_31_167_0.130548151532763_7.45759149854514_0.479890709618316 chr7 133121563 133122693 + 0.479890709618316 NA intron (NM_009980, intron 1 of 10) CpG 1355 NM_009980 13017 Mm.246240 NM_009980 ENSMUSG00000030970 Ctbp2 AA407280|D7Ertd45e|Gtrgeo6|Ribeye C-terminal binding protein 2 protein-coding common_peak2_31_167_0.130548151532763_7.45759149854514_0.479890709618316 chr11 3931353 3932563 + 0.479890709618316 NA promoter-TSS (NM_015749) promoter-TSS (NM_015749) 3 NM_001130459 21452 Mm.20948 NM_015749 ENSMUSG00000020432 Tcn2 AW208754|Tcn-2 transcobalamin 2 protein-coding common_peak2_31_167_0.130548151532763_7.45759149854514_0.479890709618316-2 chr6 98632176 98633013 + 0.479890709618316 NA Intergenic Intergenic -289840 NM_001128092 330390 Mm.484161 NM_001128092 ENSMUSG00000090667 Gm765 - predicted gene 765 protein-coding common_peak2_102_808_-0.0684480086532382_9.62577188810336_0.479161121819977 chr2 32756202 32758226 + 0.479161121819977 NA promoter-TSS (NM_152800) promoter-TSS (NM_152800) -20 NR_045485 30933 Mm.200695 NM_152800 ENSMUSG00000009563 Tor2a Prosalusin torsin family 2, member A protein-coding common_peak1_106_772_0.0646458154309251_9.62664751164031_0.479161121819977-2 chr6 13870960 13872112 + 0.479161121819977 NA promoter-TSS (NR_045995) promoter-TSS (NR_045995) -33 NR_045995 76311 Mm.367129 NR_045995 ENSMUSG00000097616 1110019D14Rik - RIKEN cDNA 1110019D14 gene ncRNA common_peak1_106_772_0.0646458154309251_9.62664751164031_0.479161121819977 chr10 19595605 19597521 + 0.479161121819977 NA intron (NM_010511, intron 1 of 6) ORR1B1-int|LTR|ERVL-MaLR 4605 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak2_67_492_-0.0886829530310287_8.9011023598624_0.479134373484208 chr17 56613153 56614757 + 0.479134373484208 NA TTS (NM_028782) TTS (NM_028782) 560 NM_018730 54217 Mm.11376 NM_018730 ENSMUSG00000057863 Rpl36 - ribosomal protein L36 protein-coding common_peak2_38_254_-0.121409987250997_7.93364844323336_0.479069397801628 chr12 80793182 80794257 + 0.479069397801628 NA intron (NM_178682, intron 1 of 5) B3|SINE|B2 3187 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding common_peak2_181_1501_0.0462882563921312_10.5758132257103_0.478910856948439 chr1 134414369 134416592 + 0.478910856948439 NA promoter-TSS (NM_001306069) promoter-TSS (NM_001306069) 102 NM_028320 72674 Mm.259976 NM_028320 ENSMUSG00000026457 Adipor1 2810031L11Rik|ACDCR1|CGI-45|Paqr1 adiponectin receptor 1 protein-coding common_peak1_126_958_0.0568236891559142_9.93379884959609_0.47866793315766 chr13 104816420 104817576 + 0.47866793315766 NA promoter-TSS (NM_026072) promoter-TSS (NM_026072) -45 NM_026072 67285 Mm.235398 NM_026072 ENSMUSG00000021715 Cwc27 3110009E13Rik|NY-CO-10|Sdccag10 CWC27 spliceosome-associated protein protein-coding common_peak1_286_2779_-0.0358897932799742_11.4229242709709_0.478556521621989 chr7 89979622 89981852 + 0.478556521621989 NA 5' UTR (NM_021876, exon 1 of 12) 5' UTR (NM_021876, exon 1 of 12) 239 NM_021876 13626 Mm.380914 NM_021876 ENSMUSG00000030619 Eed ENSMUSG00000039373|l(7)5Rn|l7Rn5|lusk embryonic ectoderm development protein-coding common_peak2_286_2779_-0.0358897932799742_11.4229242709709_0.478556521621989 chr16 23106714 23109374 + 0.478556521621989 NA promoter-TSS (NR_030705) promoter-TSS (NR_030705) 576 NR_110335 13682 Mm.260084 NM_013506 ENSMUSG00000022884 Eif4a2 4833432N07Rik|BM-010|Ddx2b|Eif4|eIF-4A-II|eIF4A-II eukaryotic translation initiation factor 4A2 protein-coding common_peak1_20_97_0.162764799683289_6.69609224395685_0.478431179756661 chr1 170037180 170037548 + 0.478431179756661 NA intron (NM_022563, intron 1 of 16) (CTATT)n|Simple_repeat|Simple_repeat 51580 NM_022563 18214 Mm.229249 NM_022563 ENSMUSG00000026674 Ddr2 AW495251|Ntrkr3|tyro10 discoidin domain receptor family, member 2 protein-coding unique_peak2_18_110_-0.194051662953216_6.6973900348735_0.478431179756661-3 chr5 21384185 21385233 + 0.478431179756661 NA intron (NM_029195, intron 2 of 18) intron (NM_029195, intron 2 of 18) 12036 NM_008013 14190 Mm.292100 NM_008013 ENSMUSG00000039899 Fgl2 AI385601|musfiblp fibrinogen-like protein 2 protein-coding common_peak1_20_97_0.162764799683289_6.69609224395685_0.478431179756661-2 chr14 47361785 47362153 + 0.478431179756661 NA Intergenic Intergenic -11891 NM_010705 16854 Mm.248615 NM_010705 ENSMUSG00000050335 Lgals3 GBP|L-34|Mac-2|gal3 lectin, galactose binding, soluble 3 protein-coding unique_peak2_18_110_-0.194051662953216_6.6973900348735_0.478431179756661-4 chr6 65584746 65585769 + 0.478431179756661 NA Intergenic Intergenic -5141 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak1_18_110_-0.194051662953216_6.6973900348735_0.478431179756661 chr3 101277106 101277560 + 0.478431179756661 NA intron (NM_013486, intron 4 of 4) intron (NM_013486, intron 4 of 4) 10606 NM_013486 12481 Mm.22842 NM_013486 ENSMUSG00000027863 Cd2 LFA-2|Ly-37|Ly37 CD2 antigen protein-coding unique_peak2_18_110_-0.194051662953216_6.6973900348735_0.478431179756661-2 chr17 88752871 88753903 + 0.478431179756661 NA intron (NM_013582, intron 9 of 10) intron (NM_013582, intron 9 of 10) 38589 NM_013582 16867 Mm.1644 NM_013582 ENSMUSG00000024107 Lhcgr Gpcr19-rs1|LH-R|Lhr luteinizing hormone/choriogonadotropin receptor protein-coding unique_peak2_18_110_-0.194051662953216_6.6973900348735_0.478431179756661 chr1 74243717 74244685 + 0.478431179756661 NA intron (NM_029711, intron 1 of 9) intron (NM_029711, intron 1 of 9) 7651 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding unique_peak2_18_110_-0.194051662953216_6.6973900348735_0.478431179756661-5 chr8 88175333 88176177 + 0.478431179756661 NA Intergenic ID_B1|SINE|B4 -23458 NM_001164499 214627 Mm.491211 NM_001164497 ENSMUSG00000036779 Papd5 5730445M16Rik|5830428A09 PAP associated domain containing 5 protein-coding common_peak1_79_536_0.075580572018076_9.10656856399445_0.478395388883466 chr3 89998185 89999317 + 0.478395388883466 NA promoter-TSS (NM_001282032) promoter-TSS (NM_001282032) -9 NR_045749 100503469 Mm.440636 NR_045749 ENSMUSG00000105552 Gm19710 - predicted gene, 19710 ncRNA common_peak1_55_341_0.0953245463183841_8.46551478804509_0.478226754916284 chr13 52577314 52578174 + 0.478226754916284 NA Intergenic Intergenic -4519 NR_046069 100040572 Mm.278873 NR_046069 Gm2848 - predicted gene 2848 ncRNA common_peak1_52_365_-0.0999580728409306_8.46572080186358_0.478226754916284 chr2 75720183 75721079 + 0.478226754916284 NA Intergenic Intergenic -15968 NM_010902 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak1_52_365_-0.0999580728409306_8.46572080186358_0.478226754916284-2 chr9 27192162 27193239 + 0.478226754916284 NA Intergenic Intergenic -37279 NM_023277 83964 Mm.28770 NM_023277 ENSMUSG00000031990 Jam3 1110002N23Rik|JAM-3|JAM-C|Jcam3 junction adhesion molecule 3 protein-coding common_peak1_336_3229_0.0318643655623418_11.6732506323625_0.478215992245506 chr19 18618405 18621692 + 0.478215992245506 NA intron (NM_017375, intron 1 of 9) intron (NM_017375, intron 1 of 9) 11765 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_26_165_-0.15283186450733_7.29862349909326_0.478143927887924-2 chr11 106417830 106418360 + 0.478143927887924 NA intron (NM_023913, intron 10 of 21) intron (NM_023913, intron 10 of 21) -35454 NM_010494 15896 Mm.394 NM_010494 ENSMUSG00000001029 Icam2 CD102|Icam-2|Ly-60 intercellular adhesion molecule 2 protein-coding common_peak2_26_165_-0.15283186450733_7.29862349909326_0.478143927887924 chr12 4132972 4133990 + 0.478143927887924 NA promoter-TSS (NM_001159537) promoter-TSS (NM_001159537) 84 NM_001159537 104111 Mm.489807 NM_138305 ENSMUSG00000020654 Adcy3 AC3|mKIAA0511 adenylate cyclase 3 protein-coding common_peak1_26_165_-0.15283186450733_7.29862349909326_0.478143927887924 chr1 127302355 127302946 + 0.478143927887924 NA intron (NM_145128, intron 2 of 17) intron (NM_145128, intron 2 of 17) 97664 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_26_165_-0.15283186450733_7.29862349909326_0.478143927887924-3 chr8 72361763 72362303 + 0.478143927887924 NA intron (NM_007944, intron 21 of 23) MIR|SINE|MIR 42971 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_207_1882_-0.0435591064142287_10.8570377314071_0.478138240350847 chr14 121915038 121916981 + 0.478138240350847 NA promoter-TSS (NM_182806) promoter-TSS (NM_182806) -235 NM_182806 110168 Mm.37405 NM_182806 ENSMUSG00000050350 Gpr18 - G protein-coupled receptor 18 protein-coding common_peak1_35_231_-0.126683322068549_7.7946393340933_0.478037229968481 chr2 161511016 161511771 + 0.478037229968481 NA Intergenic Intergenic -402307 NR_126509 71389 Mm.122738 NM_173368 ENSMUSG00000057133 Chd6 5430439G14Rik|6330406J24Rik|CHD-6 chromodomain helicase DNA binding protein 6 protein-coding unique_peak2_35_231_-0.126683322068549_7.7946393340933_0.478037229968481 chr1 171618023 171619736 + 0.478037229968481 NA Intergenic Intergenic -11469 NM_008534 17085 Mm.560 NM_008534 ENSMUSG00000004707 Ly9 AI893573|CD229|Lgp100|Ly-9|SLAMF3|T100 lymphocyte antigen 9 protein-coding common_peak2_35_231_-0.126683322068549_7.7946393340933_0.478037229968481 chr11 118236158 118237787 + 0.478037229968481 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 11620 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_98_770_-0.0691325861008707_9.5560207568646_0.477793685207024 chr3 86223609 86225160 + 0.477793685207024 NA promoter-TSS (NM_030695) promoter-TSS (NM_030695) -306 NM_001077688 80877 Mm.439825 NM_030695 ENSMUSG00000028080 Lrba C80285|D3Ertd775e|Lab300|Lba LPS-responsive beige-like anchor protein-coding common_peak2_159_1278_0.0501706123082073_10.3458858550357_0.477627804693777 chr8 121589836 121591643 + 0.477627804693777 NA intron (NM_026160, intron 1 of 3) CpG 271 NM_026160 67443 Mm.28357 NM_026160 ENSMUSG00000031812 Map1lc3b 1010001C15Rik|Atg8|LC3b|Map1lc3 microtubule-associated protein 1 light chain 3 beta protein-coding common_peak1_148_1169_0.0526321876368545_10.2186089082892_0.477529143031882 chr11 76478806 76480730 + 0.477529143031882 NA intron (NM_198018, intron 2 of 21) intron (NM_198018, intron 2 of 21) -11303 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak1_360_3517_0.0303846209420762_11.795732077943_0.477438764920138 chr17 32282950 32285262 + 0.477438764920138 NA promoter-TSS (NM_198094) promoter-TSS (NM_198094) 17 NM_198094 57261 Mm.253518 NM_020508 ENSMUSG00000024002 Brd4 Brd5|HUNK1|MCAP|WI-11513 bromodomain containing 4 protein-coding common_peak1_45_309_-0.111051289994373_8.22059876027705_0.477411111145519 chr7 18883852 18884668 + 0.477411111145519 NA promoter-TSS (NM_009402) promoter-TSS (NM_009402) -430 NM_009402 21946 Mm.21855 NM_009402 ENSMUSG00000030413 Pglyrp1 PGRP|PGRP-S|Pglyrp|Tag7|Tasg7|Tnfsf3l peptidoglycan recognition protein 1 protein-coding common_peak2_240_2249_-0.0398577908497497_11.1157803906795_0.477180036950783 chr1 58794486 58798866 + 0.477180036950783 NA intron (NM_009812, intron 1 of 8) intron (NM_009812, intron 1 of 8) 1302 NM_009812 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding common_peak1_59_373_0.0883742838964228_8.59108160183585_0.477088125273901 chr5 113588951 113589832 + 0.477088125273901 NA 3' UTR (NM_177292, exon 8 of 8) 3' UTR (NM_177292, exon 8 of 8) 38971 NM_177292 320916 Mm.102783 NM_177292 ENSMUSG00000063430 Wscd2 4933413A10Rik|C530024P05Rik|Gm450 WSC domain containing 2 protein-coding common_peak2_288_2802_-0.0354875254638944_11.4350122663005_0.477081603713026 chr7 89979419 89981990 + 0.477081603713026 NA 5' UTR (NM_021876, exon 1 of 12) 5' UTR (NM_021876, exon 1 of 12) 272 NM_021876 13626 Mm.380914 NM_021876 ENSMUSG00000030619 Eed ENSMUSG00000039373|l(7)5Rn|l7Rn5|lusk embryonic ectoderm development protein-coding common_peak2_32_209_-0.136925570005243_7.6457827326635_0.476978671597876 chr6 22423719 22424990 + 0.476978671597876 NA Intergenic Intergenic -68273 NM_138587 27999 Mm.490307 NM_138587 ENSMUSG00000029672 Fam3c D6Wsu176e|Ilei family with sequence similarity 3, member C protein-coding unique_peak2_41_237_0.109269191676911_7.9494523591464_0.476905785926435 chr2 60842628 60844158 + 0.476905785926435 NA intron (NM_020296, intron 1 of 13) intron (NM_020296, intron 1 of 13) 38045 NM_001141932 56878 Mm.259667 NM_020296 ENSMUSG00000026970 Rbms1 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1 RNA binding motif, single stranded interacting protein 1 protein-coding common_peak2_29_187_-0.145932419079934_7.48162264213767_0.476882352284323 chr12 108086676 108087951 + 0.476882352284323 NA Intergenic Intergenic -83899 NM_021399 58208 Mm.392694 NM_021399 ENSMUSG00000048251 Bcl11b 9130430L19Rik|AI604821|B630002E05Rik|BCL-11B|Ctip2|Rit1 B cell leukemia/lymphoma 11B protein-coding common_peak2_247_2328_-0.0389757859174917_11.1660070312521_0.476879531721391 chr9 102625239 102627438 + 0.476879531721391 NA promoter-TSS (NM_001301689) promoter-TSS (NM_001301689) 42 NM_181394 69010 Mm.2000 NM_181394 ENSMUSG00000035048 Anapc13 1810004D07Rik|APC13|SWM1 anaphase promoting complex subunit 13 protein-coding common_peak2_48_288_0.101950554410006_8.22590095970568_0.476820940938149 chr2 127182303 127183523 + 0.476820940938149 NA Intergenic Intergenic 25367 NM_198630 329509 Mm.120738 NM_198630 ENSMUSG00000044145 1810024B03Rik - RIKEN cDNA 1810024B03 gene protein-coding common_peak2_48_288_0.101950554410006_8.22590095970568_0.476820940938149-2 chr5 138622340 138623557 + 0.476820940938149 NA promoter-TSS (NM_183025) promoter-TSS (NM_183025) 89 NM_183025 243308 Mm.36612 NM_183025 ENSMUSG00000056014 A430033K04Rik C86988 RIKEN cDNA A430033K04 gene protein-coding common_peak1_143_1121_0.052665334822942_10.1581896280203_0.476753824759351 chr4 45012795 45013641 + 0.476753824759351 NA promoter-TSS (NM_001163284) promoter-TSS (NM_001163284) -806 NM_173399 230119 Mm.44222 NM_173399 ENSMUSG00000049657 Zbtb5 5930421I10|9430083K24Rik|AI646847|mKIAA0354 zinc finger and BTB domain containing 5 protein-coding common_peak2_117_874_0.0589995095084905_9.80263896147394_0.476609098703897 chr11 73136347 73138501 + 0.476609098703897 NA exon (NM_010353, exon 1 of 1) exon (NM_010353, exon 1 of 1) 870 NM_010353 14841 Mm.42045 NM_010353 ENSMUSG00000050107 Gsg2 Haspin germ cell associated 2, haspin protein-coding common_peak2_93_657_0.067799624877134_9.39584358617381_0.476603125667296 chr17 31854592 31855821 + 0.476603125667296 NA intron (NM_010831, intron 1 of 13) CpG-6228 586 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak1_84_579_0.0717327578375571_9.21577546893371_0.476557453267515-2 chr7 25077165 25077999 + 0.476557453267515 NA intron (NM_175477, intron 1 of 1) CpG 336 NM_175477 232976 Mm.41568 NM_175477 ENSMUSG00000045252 Zfp574 A630056B21Rik|Znf574 zinc finger protein 574 protein-coding common_peak1_84_579_0.0717327578375571_9.21577546893371_0.476557453267515 chr6 88898090 88898909 + 0.476557453267515 NA intron (NM_008564, intron 1 of 15) intron (NM_008564, intron 1 of 15) 281 NM_008564 17216 Mm.16711 NM_008564 ENSMUSG00000002870 Mcm2 AA959861|AW476101|BM28|CDCL1|Mcmd2|mKIAA0030 minichromosome maintenance complex component 2 protein-coding unique_peak2_13_57_0.201971443703998_5.95896671697957_0.476339052167849 chr1 7707916 7708401 + 0.476339052167849 NA Intergenic MMVL30-int|LTR|ERV1 619238 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding common_peak1_13_57_0.201971443703998_5.95896671697957_0.476339052167849-2 chrX 98106348 98106738 + 0.476339052167849 NA Intergenic IAPEz-int|LTR|ERVK -42214 NM_013476 11835 Mm.39005 NM_013476 ENSMUSG00000046532 Ar AW320017|Tfm androgen receptor protein-coding common_peak1_13_57_0.201971443703998_5.95896671697957_0.476339052167849 chr14 57725028 57725403 + 0.476339052167849 NA intron (NM_153382, intron 1 of 1) intron (NM_153382, intron 1 of 1) 9203 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_60_432_-0.093703763679752_8.71137133288685_0.47622700629148-4 chr3 27710557 27711362 + 0.47622700629148 NA promoter-TSS (NM_173182) promoter-TSS (NM_173182) -520 NM_173182 72007 Mm.38832 NM_173182 ENSMUSG00000039286 Fndc3b 1600019O04Rik|AW550168|Fad104|mKIAA4164 fibronectin type III domain containing 3B protein-coding common_peak1_60_432_-0.093703763679752_8.71137133288685_0.47622700629148-3 chr2 132512651 132513277 + 0.47622700629148 NA intron (NR_028286, intron 2 of 3) intron (NR_028286, intron 2 of 3) 22236 NR_028286 70371 Mm.394667 NR_028286 ENSMUSG00000086379 1700026D11Rik - RIKEN cDNA 1700026D11 gene ncRNA common_peak1_60_432_-0.093703763679752_8.71137133288685_0.47622700629148 chr1 21366863 21367754 + 0.47622700629148 NA Intergenic B1F1|SINE|Alu -1023 NM_001033904 433278 Mm.26006 NM_001033904 ENSMUSG00000041722 Khdc1c Khdc1b KH domain containing 1C protein-coding common_peak1_60_432_-0.093703763679752_8.71137133288685_0.47622700629148-2 chr2 130667429 130668167 + 0.47622700629148 NA promoter-TSS (NM_025922) promoter-TSS (NM_025922) -43 NM_025922 16434 Mm.21399 NM_025922 ENSMUSG00000074797 Itpa 2010016I08Rik|AU020102|Itp inosine triphosphatase (nucleoside triphosphate pyrophosphatase) protein-coding common_peak2_64_466_-0.0903642193767649_8.82209663002128_0.475973454689375 chr8 13315247 13317582 + 0.475973454689375 NA intron (NM_172282, intron 10 of 12) intron (NM_172282, intron 10 of 12) -22337 NM_001291765 21781 Mm.925 NM_009361 ENSMUSG00000038482 Tfdp1 Dp1|Drtf1 transcription factor Dp 1 protein-coding common_peak1_64_466_-0.0903642193767649_8.82209663002128_0.475973454689375 chr17 74395014 74396157 + 0.475973454689375 NA promoter-TSS (NM_144798) promoter-TSS (NM_144798) -23 NM_001252478 210148 Mm.243943 NM_144798 ENSMUSG00000024069 Slc30a6 9530029F08Rik|ZnT6 solute carrier family 30 (zinc transporter), member 6 protein-coding common_peak1_227_1988_0.0398957810891432_10.9777754513783_0.475970455802255 chr14 55884154 55886468 + 0.475970455802255 NA intron (NM_027143, intron 1 of 7) intron (NM_027143, intron 1 of 7) 342 NM_027143 219094 Mm.37592 NM_027143 ENSMUSG00000047153 Khnyn 6330555F21|9130227C08Rik|AI605259|Kiaa0323|mKIAA0323 KH and NYN domain containing protein-coding common_peak1_98_701_0.0661272435096034_9.48839084205936_0.475852885231811 chr7 100120574 100121589 + 0.475852885231811 NA intron (NM_133692, intron 1 of 11) intron (NM_133692, intron 1 of 11) 419 NM_133692 67967 Mm.37562 NM_133692 ENSMUSG00000030726 Pold3 2410142G14Rik|C85233|P66|P68 polymerase (DNA-directed), delta 3, accessory subunit protein-coding common_peak2_166_1349_0.048002913749766_10.4227451488131_0.475784711668544 chr10 71346587 71348625 + 0.475784711668544 NA promoter-TSS (NM_027184) promoter-TSS (NM_027184) -187 NM_027184 69718 Mm.245867 NM_027184 ENSMUSG00000060733 Ipmk 2410017C19Rik|AA408208|Impk inositol polyphosphate multikinase protein-coding common_peak2_133_1024_0.0557478169432706_10.0292821028644_0.475777698139727 chr18 67640538 67642145 + 0.475777698139727 NA promoter-TSS (NM_134138) promoter-TSS (NM_134138) -5 NM_001081073 225659 Mm.111928 NM_001081073 ENSMUSG00000073542 Cep76 6230425F05Rik|9630013E05 centrosomal protein 76 protein-coding common_peak2_38_215_0.118055947444392_7.81391547588566_0.475670454128015 chr18 7626151 7627087 + 0.475670454128015 NA intron (NM_001161620, intron 1 of 12) CpG 244 NM_001081287 75739 Mm.133293 NM_001081287 ENSMUSG00000057440 Mpp7 1110068J02Rik|2810038M04Rik|5430426E14Rik|AI415104|Gm955 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) protein-coding common_peak2_38_215_0.118055947444392_7.81391547588566_0.475670454128015-2 chr8 120701373 120702756 + 0.475670454128015 NA Intergenic Intergenic 33744 NM_001293559 12857 Mm.386758 NM_009941 ENSMUSG00000031818 Cox4i1 AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1 cytochrome c oxidase subunit IV isoform 1 protein-coding common_peak1_23_115_0.155794472964523_6.93587823160983_0.47555558029382 chr10 116565419 116565960 + 0.47555558029382 NA intron (NR_024327, intron 1 of 13) L1M4|LINE|L1 15822 NM_001037848 72068 Mm.351553 NM_028082 ENSMUSG00000020166 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650 CCR4-NOT transcription complex, subunit 2 protein-coding unique_peak2_23_115_0.155794472964523_6.93587823160983_0.47555558029382 chr16 30171274 30172252 + 0.47555558029382 NA Intergenic Intergenic 95769 NM_027904 71756 Mm.290614 NM_027904 ENSMUSG00000023176 Cpn2 1300018K11Rik carboxypeptidase N, polypeptide 2 protein-coding common_peak1_23_115_0.155794472964523_6.93587823160983_0.47555558029382-3 chr5 93097987 93098540 + 0.47555558029382 NA intron (NM_001310669, intron 1 of 10) intron (NM_001310669, intron 1 of 10) 4847 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_23_115_0.155794472964523_6.93587823160983_0.47555558029382-2 chr15 78453799 78454312 + 0.47555558029382 NA intron (NM_027902, intron 8 of 17) intron (NM_027902, intron 8 of 17) 14579 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding unique_peak2_23_115_0.155794472964523_6.93587823160983_0.47555558029382-2 chr16 93883843 93884602 + 0.47555558029382 NA intron (NM_028083, intron 1 of 13) CpG 321 NM_028083 110749 Mm.274222 NM_028083 ENSMUSG00000022945 Chaf1b 2600017H24Rik|C76145|CAF-I p60|CAF-Ip60|CAF1|CAF1A|CAF1P60|MPHOSPH7 chromatin assembly factor 1, subunit B (p60) protein-coding common_peak2_23_115_0.155794472964523_6.93587823160983_0.47555558029382 chr14 52140612 52141622 + 0.47555558029382 NA intron (NM_023879, intron 13 of 24) intron (NM_023879, intron 13 of 24) 30214 NM_023879 77945 Mm.21662 NM_023879 ENSMUSG00000057132 Rpgrip1 0610005A07Rik|4930401L23Rik|4930505G06Rik|A930002K18Rik|AA415034|nmf247 retinitis pigmentosa GTPase regulator interacting protein 1 protein-coding common_peak2_80_545_0.0735849420730261_9.12954961195637_0.475544186027322 chr2 130562835 130564469 + 0.475544186027322 NA promoter-TSS (NR_040348) promoter-TSS (NR_040348) 97 NR_040348 321014 Mm.442588 NR_040348 ENSMUSG00000060029 4930473A02Rik - RIKEN cDNA 4930473A02 gene ncRNA common_peak1_80_545_0.0735849420730261_9.12954961195637_0.475544186027322 chr2 60402413 60402942 + 0.475544186027322 NA Intergenic B1_Mus2|SINE|Alu -8848 NR_046065 100039176 Mm.261790 NR_046065 ENSMUSG00000087283 Gm13580 OTTMUSG00000012842 predicted gene 13580 ncRNA common_peak1_421_4435_-0.0278319998363905_12.1011276502435_0.475422697122221 chr15 81042819 81046538 + 0.475422697122221 NA intron (NM_153049, intron 2 of 12) intron (NM_153049, intron 2 of 12) 60369 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak2_49_341_-0.105225011563157_8.36524000910432_0.475376312266618 chr15 76656321 76657580 + 0.475376312266618 NA promoter-TSS (NM_001276321) promoter-TSS (NM_001276321) -49 NM_001276321 54151 Mm.247752 NM_019396 ENSMUSG00000053929 Cyhr1 1110031M01Rik|AU042374|Chrp cysteine and histidine rich 1 protein-coding common_peak1_52_318_0.098329151678243_8.36657718960399_0.475376312266519 chr13 113058689 113059665 + 0.475376312266519 NA intron (NM_001281487, intron 3 of 11) intron (NM_001281487, intron 3 of 11) -12789 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak1_52_318_0.098329151678243_8.36657718960399_0.475376312266519-2 chr16 57470307 57471266 + 0.475376312266519 NA intron (NM_001040397, intron 1 of 4) intron (NM_001040397, intron 1 of 4) -78456 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak2_289_2681_0.0342876906727696_11.4062373672409_0.475296150905832 chrX 73908946 73915038 + 0.475296150905832 NA promoter-TSS (NM_001162424) promoter-TSS (NM_001162424) -694 NM_001162424 171207 Mm.482337 NM_138630 ENSMUSG00000031389 Arhgap4 A130009C12Rik|A530015A20Rik|Rgc1|c1|mKIAA0131 Rho GTPase activating protein 4 protein-coding common_peak1_128_977_0.0561710314549995_9.96177617067973_0.475282197894822 chr3 59260732 59262455 + 0.475282197894822 NA intron (NM_177855, intron 32 of 43) Charlie13b|DNA|hAT-Charlie 1238 NM_027571 70839 Mm.422675 NM_027571 ENSMUSG00000036353 P2ry12 2900079B22Rik|4921504D23Rik|P2Y12 purinergic receptor P2Y, G-protein coupled 12 protein-coding common_peak2_139_1082_0.0538528092879194_10.1077439322523_0.474679532279162 chr14 50929884 50931880 + 0.474679532279162 NA promoter-TSS (NM_001033271) promoter-TSS (NM_001033271) -33 NM_001310507 219024 Mm.239117 NM_001033271 ENSMUSG00000035953 Tmem55b BC039161 transmembrane protein 55b protein-coding common_peak2_151_1289_-0.0529542133546581_10.3066782436333_0.474636902976529 chr19 57081273 57085703 + 0.474636902976529 NA intron (NM_001290813, intron 7 of 20) intron (NM_001290813, intron 7 of 20) 35536 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_203_1731_0.0426721847734441_10.7795593071134_0.474569032623493 chr14 65111569 65114898 + 0.474569032623493 NA Intergenic Intergenic -15127 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak2_167_1359_0.0479206412198643_10.4333512567476_0.474520540878677 chr2 173218086 173220066 + 0.474520540878677 NA promoter-TSS (NM_001139519) promoter-TSS (NM_001139519) -154 NM_001139519 58203 Mm.116687 NM_021394 ENSMUSG00000027514 Zbp1 2010010H03Rik|Dai|Dlm1|mZaDLM Z-DNA binding protein 1 protein-coding common_peak1_276_2532_0.0355886873350286_11.32442570538_0.474481280870373 chr14 66278240 66281657 + 0.474481280870373 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) 1104 NM_172498 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_552_5964_0.0233287777961966_12.5539708114807_0.474446358896577 chr10 118465460 118472626 + 0.474446358896577 NA Intergenic Intergenic 27997 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak1_35_194_0.123967359309413_7.66931399340432_0.474376726258689 chr15 102147418 102148195 + 0.474376726258689 NA intron (NM_008344, intron 1 of 3) intron (NM_008344, intron 1 of 3) -2769 NM_146064 223920 Mm.358862 NM_146064 ENSMUSG00000023045 Soat2 ACAT2|D15Wsu97e sterol O-acyltransferase 2 protein-coding common_peak2_35_194_0.123967359309413_7.66931399340432_0.474376726258689 chr7 102441719 102442573 + 0.474376726258689 NA intron (NM_009103, intron 1 of 18) intron (NM_009103, intron 1 of 18) 451 NM_009103 20133 Mm.197486 NM_009103 ENSMUSG00000030978 Rrm1 RnrM1 ribonucleotide reductase M1 protein-coding unique_peak2_35_194_0.123967359309413_7.66931399340432_0.474376726258689 chr4 33280594 33281834 + 0.474376726258689 NA Intergenic B1F2|SINE|Alu -29097 NM_011884 24018 Mm.240024 NM_011884 ENSMUSG00000028274 Rngtt AU020997|HCE|MCE1 RNA guanylyltransferase and 5'-phosphatase protein-coding common_peak2_77_579_-0.080353329220717_9.13973242540458_0.47430620373944 chr19 60225860 60226938 + 0.47430620373944 NA 5' UTR (NM_029648, exon 1 of 8) 5' UTR (NM_029648, exon 1 of 8) 298 NM_029648 76539 Mm.290183 NM_029648 ENSMUSG00000057858 Fam204a 2310065H12Rik|2610015K05Rik|D19Ertd737e family with sequence similarity 204, member A protein-coding common_peak2_56_349_0.0932876077178442_8.49785491569125_0.474298493173253 chr16 49698443 49699870 + 0.474298493173253 NA promoter-TSS (NM_028680) promoter-TSS (NM_028680) -138 NM_028680 73916 Mm.241276 NM_028680 ENSMUSG00000032965 Ift57 4833420A15Rik|Esrrbl1|Hippi|MHS4R2 intraflagellar transport 57 protein-coding common_peak1_56_349_0.0932876077178442_8.49785491569125_0.474298493173253 chr19 5424114 5424960 + 0.474298493173253 NA promoter-TSS (NM_001256515) promoter-TSS (NM_001256515) 442 NM_024176 66556 Mm.275446 NM_024176 ENSMUSG00000024914 Drap1 2310074H19Rik|NC2-alpha Dr1 associated protein 1 (negative cofactor 2 alpha) protein-coding common_peak2_56_349_0.0932876077178442_8.49785491569125_0.474298493173253-2 chr9 35266998 35268617 + 0.474298493173253 NA promoter-TSS (NM_028040) promoter-TSS (NM_028040) -2 NM_001286604 109229 Mm.24197 NM_175411 ENSMUSG00000050471 Fam118b 2310022O21Rik|2700018L24Rik|C030004A17Rik|Ppp4r1l family with sequence similarity 118, member B protein-coding common_peak1_135_1127_-0.0561781578655527_10.111462273466_0.474208455142017 chr5 24444523 24445948 + 0.474208455142017 NA promoter-TSS (NM_023229) promoter-TSS (NM_023229) 0 NM_023229 66587 Mm.28123 NM_023229 ENSMUSG00000028959 Fastk 0610011K02Rik|610011K02Rik Fas-activated serine/threonine kinase protein-coding common_peak2_21_130_-0.173625258843499_6.9466103721157_0.474135131783491 chr12 111813375 111814036 + 0.474135131783491 NA promoter-TSS (NM_026752) promoter-TSS (NM_026752) 174 NM_028875 74335 Mm.19082 NM_028875 ENSMUSG00000021287 Xrcc3 - X-ray repair complementing defective repair in Chinese hamster cells 3 protein-coding unique_peak2_21_130_-0.173625258843499_6.9466103721157_0.474135131783491 chr5 123991973 123993046 + 0.474135131783491 NA intron (NM_145070, intron 7 of 31) intron (NM_145070, intron 7 of 31) -4343 NR_105999 102465625 NR_105999 ENSMUSG00000098454 Mir7032 Gm27309|mmu-mir-7032 microRNA 7032 ncRNA common_peak2_229_2010_0.0394813358528321_10.9934380342318_0.474082331062313 chr7 128118656 128123194 + 0.474082331062313 NA Intergenic L1_Mur3|LINE|L1 -8643 NM_021334 16411 Mm.22378 NM_021334 ENSMUSG00000030789 Itgax AI449405|Cd11c|Cr4|N418 integrin alpha X protein-coding common_peak2_86_659_-0.0735243835799633_9.32956002245583_0.4739551334261 chr11 100526901 100528012 + 0.4739551334261 NA intron (NM_001199296, intron 1 of 28) CpG 544 NM_134037 104112 Mm.282039 NM_134037 ENSMUSG00000020917 Acly A730098H14Rik|AW538652 ATP citrate lyase protein-coding common_peak2_73_543_-0.0810668788525728_9.04692940182405_0.473824458858074 chr18 80677941 80680811 + 0.473824458858074 NA intron (NM_198429, intron 3 of 9) intron (NM_198429, intron 3 of 9) 28797 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_26_134_0.145391969788764_7.14951158194521_0.473754489509536-2 chr9 123941109 123941860 + 0.473754489509536 NA Intergenic RMER20B|LTR|ERVK 27208 NM_009912 12768 Mm.274927 NM_009912 ENSMUSG00000025804 Ccr1 Cmkbr1|Mip-1a-R chemokine (C-C motif) receptor 1 protein-coding common_peak1_26_134_0.145391969788764_7.14951158194521_0.473754489509536 chr1 64528470 64529053 + 0.473754489509536 NA Intergenic MTD|LTR|ERVL-MaLR -4043 NM_133828 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding common_peak2_328_3135_0.0319573525762795_11.6306885204033_0.473662406273718 chr1 53771764 53778643 + 0.473662406273718 NA intron (NM_133810, intron 2 of 7) intron (NM_133810, intron 2 of 7) 10012 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak1_129_987_0.0551595999345746_9.97594703155196_0.473551560014034 chr8 34964835 34966310 + 0.473551560014034 NA exon (NM_175091, exon 1 of 27) exon (NM_175091, exon 1 of 27) 118 NM_175091 21951 Mm.88364 NM_175091 ENSMUSG00000031529 Tnks 4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase protein-coding common_peak2_129_987_0.0551595999345746_9.97594703155196_0.473551560014034 chr12 111156978 111159561 + 0.473551560014034 NA Intergenic Intergenic -8101 NM_001286122 22031 Mm.27431 NM_011632 ENSMUSG00000021277 Traf3 AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn TNF receptor-associated factor 3 protein-coding common_peak2_60_381_0.0870906230112247_8.62097413954136_0.473507581385207 chr11 100587920 100589435 + 0.473507581385207 NA intron (NM_019795, intron 9 of 13) PB1D10|SINE|Alu 12786 NM_001146318 12799 Mm.15711 NM_009923 ENSMUSG00000006782 Cnp CNPase|Cnp-1|Cnp1 2',3'-cyclic nucleotide 3' phosphodiesterase protein-coding common_peak1_39_262_-0.12117245047517_7.97833276405472_0.473414334803311 chr8 13315958 13316781 + 0.473414334803311 NA intron (NM_172282, intron 10 of 12) intron (NM_172282, intron 10 of 12) -22382 NM_001291765 21781 Mm.925 NM_009361 ENSMUSG00000038482 Tfdp1 Dp1|Drtf1 transcription factor Dp 1 protein-coding common_peak2_64_413_0.0834275628335721_8.73520073891611_0.473347280532522 chr14 52104309 52105120 + 0.473347280532522 NA promoter-TSS (NM_001170984) promoter-TSS (NM_001170984) -686 NM_001170984 15381 Mm.427321 NM_016884 ENSMUSG00000060373 Hnrnpc AL022939|D14Wsu171e|Hnrpc|Hnrpc1|Hnrpc2|hnRNPC1|hnRNPC2|hnrnp-C heterogeneous nuclear ribonucleoprotein C protein-coding common_peak1_367_3603_0.0295267530253938_11.8301466723262_0.473271857014375 chr10 42501319 42503638 + 0.473271857014375 NA exon (NM_017472, exon 1 of 4) exon (NM_017472, exon 1 of 4) 424 NM_017472 54198 Mm.277870 NM_017472 ENSMUSG00000019804 Snx3 SDP3 sorting nexin 3 protein-coding common_peak2_32_174_0.126108835828551_7.5142655297466_0.473025231892182-4 chr4 119105342 119106449 + 0.473025231892182 NA Intergenic Intergenic -2850 NM_011400 20525 Mm.21002 NM_011400 ENSMUSG00000028645 Slc2a1 Glut-1|Glut1 solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding common_peak1_32_174_0.126108835828551_7.5142655297466_0.473025231892182 chr7 141561497 141562100 + 0.473025231892182 NA promoter-TSS (NM_007459) promoter-TSS (NM_007459) -382 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding common_peak2_32_174_0.126108835828551_7.5142655297466_0.473025231892182-2 chr19 29066838 29067829 + 0.473025231892182 NA promoter-TSS (NR_045687) promoter-TSS (NR_045687) 32 NR_045687 100503337 Mm.103412 NR_045687 Gm9895 ENSMUSG00000052976 predicted gene 9895 ncRNA common_peak2_32_174_0.126108835828551_7.5142655297466_0.473025231892182-3 chr19 38818622 38819733 + 0.473025231892182 NA promoter-TSS (NM_021315) promoter-TSS (NM_021315) 60 NM_021315 57753 Mm.86482 NM_021315 ENSMUSG00000024999 Noc3l AF233884|Fad24 NOC3 like DNA replication regulator protein-coding common_peak2_32_174_0.126108835828551_7.5142655297466_0.473025231892182 chr11 11667328 11668757 + 0.473025231892182 NA Intergenic Intergenic -17883 NM_009578 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_18_85_0.174099448694792_6.51331447904949_0.472963502765614-5 chr4 153975157 153975541 + 0.472963502765614 NA promoter-TSS (NM_177673) promoter-TSS (NM_177673) -212 NM_177673 230967 Mm.297905 NM_177673 ENSMUSG00000039523 Cep104 A930027E11|AI115523|Kiaa0562|mKIAA0562 centrosomal protein 104 protein-coding unique_peak2_18_85_0.174099448694792_6.51331447904949_0.472963502765614 chr6 136549589 136550474 + 0.472963502765614 NA intron (NM_019426, intron 1 of 14) intron (NM_019426, intron 1 of 14) 31180 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_18_85_0.174099448694792_6.51331447904949_0.472963502765614-4 chr19 9040305 9040780 + 0.472963502765614 NA intron (NM_001039959, intron 5 of 5) T-rich|Low_complexity|Low_complexity 22638 NR_105786 102465190 NR_105786 ENSMUSG00000099308 Mir6367 Gm27467|mmu-mir-6367 microRNA 6367 ncRNA unique_peak2_18_85_0.174099448694792_6.51331447904949_0.472963502765614-2 chrX 153832037 153832742 + 0.472963502765614 NA promoter-TSS (NM_001005370) promoter-TSS (NM_001005370) 96 NM_001005370 278240 Mm.293363 NM_001005370 ENSMUSG00000046550 Spin2c BC068162|SPIN-2C|Spin2 spindlin family, member 2C protein-coding common_peak1_18_85_0.174099448694792_6.51331447904949_0.472963502765614-3 chr11 74550578 74550977 + 0.472963502765614 NA intron (NM_001015046, intron 2 of 24) intron (NM_001015046, intron 2 of 24) 39381 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak1_18_85_0.174099448694792_6.51331447904949_0.472963502765614-6 chr4 155667159 155667674 + 0.472963502765614 NA intron (NM_001256107, intron 1 of 19) B2_Mm1t|SINE|B2 1838 NM_001256108 76580 Mm.235738 NM_145124 ENSMUSG00000029060 Mib2 2210008I11Rik|Zzank1|skd mindbomb E3 ubiquitin protein ligase 2 protein-coding common_peak1_18_85_0.174099448694792_6.51331447904949_0.472963502765614 chr1 37473435 37473770 + 0.472963502765614 NA intron (NM_001290801, intron 4 of 14) L1M3b|LINE|L1 15003 NR_024017 77633 Mm.483177 NR_024017 ENSMUSG00000103948 4930594C11Rik - G1 to S phase transition pseudogene pseudo common_peak1_18_85_0.174099448694792_6.51331447904949_0.472963502765614-2 chr1 173423009 173423497 + 0.472963502765614 NA intron (NM_001013779, intron 1 of 8) intron (NM_001013779, intron 1 of 8) 2649 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding unique_peak2_16_97_-0.211173583141036_6.50912305254469_0.47296350276559-2 chr15 101258650 101259358 + 0.47296350276559 NA Intergenic Intergenic -7842 NM_010444 15370 Mm.119 NM_010444 ENSMUSG00000023034 Nr4a1 GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|TIS1|TR3|nur77 nuclear receptor subfamily 4, group A, member 1 protein-coding common_peak1_16_97_-0.211173583141036_6.50912305254469_0.47296350276559 chr13 64153665 64154213 + 0.47296350276559 NA promoter-TSS (NM_175494) promoter-TSS (NM_175494) -740 NM_175494 238673 Mm.300065 NM_175494 ENSMUSG00000044934 Zfp367 8030486J21Rik|ZFF29a|ZFF29b|Znf367 zinc finger protein 367 protein-coding unique_peak2_16_97_-0.211173583141036_6.50912305254469_0.47296350276559-3 chr19 21773886 21774511 + 0.47296350276559 NA Intergenic Intergenic -4142 NM_001033759 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding unique_peak2_16_97_-0.211173583141036_6.50912305254469_0.47296350276559 chr15 79913521 79914305 + 0.47296350276559 NA Intergenic Intergenic 18733 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak2_119_893_0.057750033787098_9.83300603807687_0.472950665735201 chr3 51552352 51554670 + 0.472950665735201 NA intron (NM_080793, intron 1 of 7) intron (NM_080793, intron 1 of 7) -6246 NR_033624 100039684 Mm.387178 NR_033624 5031434O11Rik AI481280|Gm2370 RIKEN cDNA 5031434O11 gene ncRNA common_peak2_61_440_-0.0913403296368589_8.73896468073909_0.472943602268034 chr10 62552907 62554707 + 0.472943602268034 NA Intergenic Intergenic 24650 NM_028197 72320 Mm.258955 NM_028197 ENSMUSG00000036955 Kif1bp 0710007C18Rik|2510003E04Rik|KBP|mKIAA1279 KIF1 binding protein protein-coding common_peak2_211_1816_0.0416236835817081_10.848154546025_0.47282164149191 chr14 64439873 64442055 + 0.47282164149191 NA promoter-TSS (NM_001253715) promoter-TSS (NM_001253715) 62 NM_001253715 110265 Mm.26713 NM_026322 ENSMUSG00000054733 Msra 2310045J23Rik|6530413P12Rik|MSR-A methionine sulfoxide reductase A protein-coding common_peak1_82_623_-0.0758963496939007_9.2474540440153_0.472800485819922 chr4 139380611 139381757 + 0.472800485819922 NA intron (NM_001160319, intron 1 of 105) intron (NM_001160319, intron 1 of 105) 525 NM_001160319 69116 Mm.271956 NM_001160319 ENSMUSG00000066036 Ubr4 1810009A16Rik|A930005E13Rik|D930005K06Rik|Gm1032|Gm1666|N28143|RBAF600|Zubr1|mKIAA0462|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding common_peak1_82_623_-0.0758963496939007_9.2474540440153_0.472800485819922-2 chr6 47767509 47768695 + 0.472800485819922 NA Intergenic (TCC)n|Simple_repeat|Simple_repeat -15177 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_29_154_0.132532027323466_7.34239041893597_0.472672926973512-2 chr8 117278467 117279143 + 0.472672926973512 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 21786 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_29_154_0.132532027323466_7.34239041893597_0.472672926973512 chr6 130307572 130308124 + 0.472672926973512 NA intron (NM_024470, intron 1 of 7) RSINE1|SINE|B4 513 NM_024470 79410 Mm.482592 NM_024470 Klra23 Ly-49W1|Ly-49W2|Ly49W killer cell lectin-like receptor subfamily A, member 23 protein-coding common_peak2_29_154_0.132532027323466_7.34239041893597_0.472672926973512 chr1 180568681 180569589 + 0.472672926973512 NA exon (NM_007415, exon 1 of 23) exon (NM_007415, exon 1 of 23) 160 NM_007415 11545 Mm.277779 NM_007415 ENSMUSG00000026496 Parp1 5830444G22Rik|AI893648|ARTD1|Adprp|Adprt1|C80510|PARP|PPOL|parp-1|sPARP-1 poly (ADP-ribose) polymerase family, member 1 protein-coding common_peak2_273_2626_-0.0362506174124153_11.3410751764274_0.47247518831622 chr10 8127367 8133125 + 0.47247518831622 NA Intergenic Intergenic -174123 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak2_188_1675_-0.0450627575942857_10.6882750549022_0.472240202569249 chr9 96630088 96632154 + 0.472240202569249 NA intron (NM_053268, intron 1 of 23) CpG 382 NM_053268 114713 Mm.124502 NM_053268 ENSMUSG00000032413 Rasa2 5430433H21Rik|AA517451|AU023900|GAP1m RAS p21 protein activator 2 protein-coding common_peak1_49_296_0.0983083825219744_8.26347331206175_0.472238081166801 chr7 142462790 142463442 + 0.472238081166801 NA intron (NM_001271509, intron 1 of 10) intron (NM_001271509, intron 1 of 10) 2304 NM_001136071 16985 Mm.234003 NM_019391 ENSMUSG00000018819 Lsp1 Lsp-1|WP34|p50|pp52 lymphocyte specific 1 protein-coding common_peak1_226_2091_-0.0407223892592103_11.0103059416173_0.472068502217777 chr5 121834183 121837861 + 0.472068502217777 NA promoter-TSS (NM_001306126) promoter-TSS (NM_001306126) 82 NM_001306126 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding common_peak1_42_244_0.10908923125138_7.99118255462826_0.472056273020746 chr19 9938032 9939025 + 0.472056273020746 NA Intergenic Intergenic -38995 NM_016692 16319 Mm.29755 NM_016692 ENSMUSG00000024660 Incenp 2700067E22Rik|AU019509|C130081E20|C77457 inner centromere protein protein-coding common_peak1_95_675_0.0661206541826242_9.43393976337349_0.472032013071342 chr17 84877930 84878990 + 0.472032013071342 NA Intergenic Intergenic -78281 NM_001159497 19043 Mm.249695 NM_011151 ENSMUSG00000061130 Ppm1b PP2CB protein phosphatase 1B, magnesium dependent, beta isoform protein-coding common_peak1_175_1440_0.046780056078271_10.5162446482139_0.471907609987721 chr8 123477386 123478810 + 0.471907609987721 NA intron (NM_054070, intron 1 of 16) CpG 236 NR_028260 114896 Mm.287475 NM_054070 ENSMUSG00000031967 Afg3l1 1700047G05Rik|3110061K15Rik AFG3-like AAA ATPase 1 protein-coding common_peak2_36_239_-0.127106944397108_7.84333712340996_0.471863451318851 chr9 45828019 45829341 + 0.471863451318851 NA promoter-TSS (NM_001081373) promoter-TSS (NM_001081373) -42 NM_001081373 214552 Mm.260103 NM_172531 ENSMUSG00000043987 Cep164 AI450905|BC027092|D030051D21|mKIAA1052 centrosomal protein 164 protein-coding common_peak2_142_1197_-0.0542218462063584_10.1993012696856_0.471820143373365 chr15 78834049 78836970 + 0.471820143373365 NA Intergenic Intergenic -7138 NM_027219 104445 Mm.307488 NM_027219 ENSMUSG00000049521 Cdc42ep1 1810058K22Rik|AA980734|Borg5|CEP1|MSE55 CDC42 effector protein (Rho GTPase binding) 1 protein-coding common_peak2_267_2556_-0.0364681227192136_11.302002383882_0.471733058647844 chr14 121914394 121918782 + 0.471733058647844 NA promoter-TSS (NM_182806) promoter-TSS (NM_182806) -814 NM_182806 110168 Mm.37405 NM_182806 ENSMUSG00000050350 Gpr18 - G protein-coupled receptor 18 protein-coding common_peak2_152_1210_0.049822143586411_10.2668942214875_0.471654753725695 chr7 4738869 4741284 + 0.471654753725695 NA promoter-TSS (NM_001115018) promoter-TSS (NM_001115018) -51 NM_146177 232811 Mm.247844 NM_146177 ENSMUSG00000059851 Kmt5c BC024816|Suv4-20h2|Suv420h2 lysine methyltransferase 5C protein-coding common_peak2_201_1816_-0.0438821994423044_10.805401604513_0.471465563011633 chr15 97829942 97832400 + 0.471465563011633 NA intron (NM_001204276, intron 1 of 25) CpG 596 NM_019572 56233 Mm.384027 NM_019572 ENSMUSG00000022475 Hdac7 5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062 histone deacetylase 7 protein-coding common_peak1_24_151_-0.161912321307201_7.16697135278998_0.471344968188905-4 chr11 72207065 72207422 + 0.471344968188905 NA promoter-TSS (NM_026559) promoter-TSS (NM_026559) -311 NM_026559 52700 Mm.27670 NM_026559 ENSMUSG00000020803 Txndc17 4831443O22Rik|D11Ertd672e|TRP14|Txnl5 thioredoxin domain containing 17 protein-coding common_peak1_24_151_-0.161912321307201_7.16697135278998_0.471344968188905 chr1 88657068 88657607 + 0.471344968188905 NA Intergenic Intergenic 44854 NM_177305 320982 Mm.27968 NM_177305 ENSMUSG00000049866 Arl4c A630084M22Rik|Arl7|LAK ADP-ribosylation factor-like 4C protein-coding common_peak1_24_151_-0.161912321307201_7.16697135278998_0.471344968188905-3 chr11 49245215 49245800 + 0.471344968188905 NA 5' UTR (NM_010794, exon 2 of 3) 5' UTR (NM_010794, exon 2 of 3) 1316 NM_001110148 17308 Mm.196933 NM_010794 ENSMUSG00000020346 Mgat1 Mgat-1 mannoside acetylglucosaminyltransferase 1 protein-coding common_peak1_24_151_-0.161912321307201_7.16697135278998_0.471344968188905-6 chr2 33035495 33035963 + 0.471344968188905 NA intron (NM_178888, intron 8 of 28) B3A|SINE|B2 51475 NM_178888 99326 Mm.41290 NM_178888 ENSMUSG00000038860 Garnl3 AW120551 GTPase activating RANGAP domain-like 3 protein-coding common_peak1_24_151_-0.161912321307201_7.16697135278998_0.471344968188905-2 chr10 58392571 58393111 + 0.471344968188905 NA intron (NM_201242, intron 1 of 9) L1MD2|LINE|L1 -1532 NM_001193303 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak1_24_151_-0.161912321307201_7.16697135278998_0.471344968188905-5 chr17 80224452 80224905 + 0.471344968188905 NA intron (NM_026053, intron 1 of 2) intron (NM_026053, intron 1 of 2) 189 NM_026053 67242 Mm.279985 NM_026053 ENSMUSG00000055760 Gemin6 2610019B15Rik|2810470M17Rik gem (nuclear organelle) associated protein 6 protein-coding common_peak1_33_216_-0.131402660283952_7.6958499023025_0.471024896884366 chr1 85719706 85720701 + 0.471024896884366 NA intron (NM_177055, intron 4 of 5) intron (NM_177055, intron 4 of 5) 16403 NM_177055 319997 Mm.116691 NM_177055 ENSMUSG00000052760 A630001G21Rik - RIKEN cDNA A630001G21 gene protein-coding common_peak2_110_810_0.0603600631474226_9.69373813579098_0.470984702622503-2 chr12 105030989 105033568 + 0.470984702622503 NA promoter-TSS (NR_028576) promoter-TSS (NR_028576) 1 NR_003145 69434 Mm.380736 NR_003145 Snhg10 1700026B20Rik|AI642517 small nucleolar RNA host gene 10 ncRNA common_peak2_110_810_0.0603600631474226_9.69373813579098_0.470984702622503 chr1 37889456 37891346 + 0.470984702622503 NA promoter-TSS (NM_027098) promoter-TSS (NM_027098) 10 NM_026913 69028 Mm.63984 NM_026913 ENSMUSG00000026088 Mitd1 1500032H18Rik MIT, microtubule interacting and transport, domain containing 1 protein-coding common_peak1_164_1329_0.0482150041506486_10.4013180324639_0.470965545602748 chr1 106611530 106613894 + 0.470965545602748 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -66081 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_147_1160_0.051856016718558_10.2070802652248_0.470952725422694 chr14 69731732 69733864 + 0.470952725422694 NA promoter-TSS (NR_130157) promoter-TSS (NR_130157) 14 NR_130166 75016 Mm.394574 NR_130157 ENSMUSG00000097284 4930480K23Rik - RIKEN cDNA 4930480K23 gene ncRNA common_peak1_27_172_-0.148063477618799_7.36059648882732_0.470578047413447 chr11 103382314 103382793 + 0.470578047413447 NA intron (NM_183034, intron 5 of 11) intron (NM_183034, intron 5 of 11) -18861 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak1_57_357_0.0914598484346687_8.52954570148159_0.470540654741118 chr15 79346134 79346957 + 0.470540654741118 NA promoter-TSS (NM_010755) promoter-TSS (NM_010755) -76 NM_001304830 17133 Mm.86646 NM_010755 ENSMUSG00000042622 Maff - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) protein-coding common_peak1_57_357_0.0914598484346687_8.52954570148159_0.470540654741118-2 chr17 23599055 23600012 + 0.470540654741118 NA promoter-TSS (NM_011747) promoter-TSS (NM_011747) -46 NM_011747 22654 Mm.40326 NM_011747 ENSMUSG00000062012 Zfp13 4933429B21|AI835008|Krox-8|Rhit|Zfp-13 zinc finger protein 13 protein-coding common_peak1_364_3567_0.029524713343644_11.8156622565921_0.470467541173121 chr4 137356473 137358435 + 0.470467541173121 NA intron (NM_001243769, intron 1 of 5) CpG 305 NM_009861 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding unique_peak2_70_517_-0.0836487418395375_8.97498391676679_0.470279920419525 chr1 164452135 164455365 + 0.470279920419525 NA intron (NM_009721, intron 1 of 5) intron (NM_009721, intron 1 of 5) 4605 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding common_peak1_70_517_-0.0836487418395375_8.97498391676679_0.470279920419525 chr1 173419925 173421342 + 0.470279920419525 NA promoter-TSS (NM_001013779) promoter-TSS (NM_001013779) 29 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak2_70_517_-0.0836487418395375_8.97498391676679_0.470279920419525 chr4 141789845 141791435 + 0.470279920419525 NA promoter-TSS (NM_172338) promoter-TSS (NM_172338) 4 NM_172338 214063 Mm.39102 NM_172338 ENSMUSG00000040697 Dnajc16 2900037O03Rik|4732437J24Rik|D030060M24|mKIAA0962 DnaJ heat shock protein family (Hsp40) member C16 protein-coding common_peak1_30_194_-0.140648109015304_7.53700625924196_0.470241672322709 chr4 8689761 8690339 + 0.470241672322709 NA promoter-TSS (NM_001277149) promoter-TSS (NM_001277149) -356 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding unique_peak2_30_194_-0.140648109015304_7.53700625924196_0.470241672322709 chr6 146485628 146486869 + 0.470241672322709 NA intron (NM_019923, intron 1 of 56) intron (NM_019923, intron 1 of 56) 15975 NM_010586 16439 Mm.7800 NM_010586 ENSMUSG00000030287 Itpr2 AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2 inositol 1,4,5-triphosphate receptor 2 protein-coding common_peak1_142_1112_0.0519524692404669_10.1462141119622_0.470081040749336 chr19 47579008 47580608 + 0.470081040749336 NA promoter-TSS (NM_001164639) promoter-TSS (NM_001164639) -211 NM_009289 20874 Mm.281011 NM_009289 ENSMUSG00000025060 Slk 9A2|AV021402|AW411554|Etk4|SMAK|Stk2|mKIAA0204|mSLK STE20-like kinase protein-coding common_peak1_172_1505_-0.047295523179379_10.5328582930822_0.469945979162151 chr1 52118636 52120065 + 0.469945979162151 NA promoter-TSS (NM_001205313) promoter-TSS (NM_001205313) -88 NM_009283 20846 Mm.277406 NM_009283 ENSMUSG00000026104 Stat1 2010005J02Rik|AA408197 signal transducer and activator of transcription 1 protein-coding common_peak1_214_1849_0.0405232017285968_10.873571156268_0.469799509668601 chr10 128302708 128304179 + 0.469799509668601 NA 5' UTR (NM_001252327, exon 1 of 26) 5' UTR (NM_001252327, exon 1 of 26) 108 NM_001252326 103135 Mm.244183 NM_133992 ENSMUSG00000005682 Pan2 1200014O24Rik|AI047843|AW742773|Usp52|mKIAA0710 PAN2 poly(A) specific ribonuclease subunit protein-coding common_peak1_39_223_0.110391616759529_7.86255073043737_0.469657912590998 chr5 149031048 149031844 + 0.469657912590998 NA Intergenic CpG 20170 NM_001313894 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding common_peak2_58_415_-0.0949133130992674_8.65298306159146_0.469649684887608 chr10 122096437 122097396 + 0.469649684887608 NA exon (NM_153059, exon 1 of 6) exon (NM_153059, exon 1 of 6) 186 NM_153059 216395 Mm.236764 NM_153059 ENSMUSG00000034620 Tmem5 6330415D21Rik transmembrane protein 5 protein-coding common_peak2_101_728_0.0645080839868761_9.54202904632037_0.469515901374191 chr11 60830069 60831455 + 0.469515901374191 NA intron (NM_001172112, intron 1 of 6) intron (NM_001172112, intron 1 of 6) 131 NM_145428 216820 Mm.21475 NM_145428 ENSMUSG00000042569 Dhrs7b BC003479|C79874|C80074|PexRAP dehydrogenase/reductase (SDR family) member 7B protein-coding common_peak2_78_528_0.0749751789992903_9.08461150161367_0.46936417046846 chr9 108936190 108937562 + 0.46936417046846 NA intron (NM_025407, intron 1 of 12) CpG 228 NM_025407 22273 Mm.335460 NM_025407 ENSMUSG00000025651 Uqcrc1 1110032G10Rik ubiquinol-cytochrome c reductase core protein 1 protein-coding common_peak1_107_854_-0.0643484205609539_9.70760639949278_0.469358089180858 chr10 81266537 81267089 + 0.469358089180858 NA exon (NM_025317, exon 1 of 3) exon (NM_025317, exon 1 of 3) 113 NM_025317 66047 Mm.43397 NM_025317 ENSMUSG00000034932 Mrpl54 0610008M19Rik|D10Sut1e mitochondrial ribosomal protein L54 protein-coding common_peak2_88_677_-0.0721230943721558_9.36907991595027_0.469245195238422 chr18 80545561 80548101 + 0.469245195238422 NA Intergenic Intergenic -2285 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_47_324_-0.103908128637364_8.29234184359713_0.468954771588988 chr2 103656936 103657924 + 0.468954771588988 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 91120 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak1_196_1658_0.043008445669436_10.7176023937906_0.468782170569807 chr1 143915648 143917948 + 0.468782170569807 NA Intergenic Intergenic 87351 NM_009061 19735 Mm.28262 NM_009061 ENSMUSG00000026360 Rgs2 GOS8 regulator of G-protein signaling 2 protein-coding unique_peak2_19_116_-0.179230491952628_6.78074947360709_0.468698791045168 chr2 69379579 69380303 + 0.468698791045168 NA promoter-TSS (NM_175512) promoter-TSS (NM_175512) -521 NM_175512 241452 Mm.211655 NM_175512 ENSMUSG00000027068 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 protein-coding common_peak1_19_116_-0.179230491952628_6.78074947360709_0.468698791045168-3 chr13 30610627 30611063 + 0.468698791045168 NA Intergenic Intergenic -4198 NR_045975 75090 Mm.292232 NR_045975 ENSMUSG00000086263 4930519D14Rik - RIKEN cDNA 4930519D14 gene ncRNA common_peak1_19_116_-0.179230491952628_6.78074947360709_0.468698791045168-2 chr10 93402150 93402662 + 0.468698791045168 NA Intergenic Intergenic -30701 NR_106161 102465791 NR_106161 ENSMUSG00000098679 Mir7688 Gm27874|mmu-mir-7688 microRNA 7688 ncRNA common_peak1_19_116_-0.179230491952628_6.78074947360709_0.468698791045168-4 chr15 37776061 37776591 + 0.468698791045168 NA intron (NM_134094, intron 1 of 6) intron (NM_134094, intron 1 of 6) 15674 NM_001170866 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak1_19_116_-0.179230491952628_6.78074947360709_0.468698791045168-5 chr18 12228900 12229287 + 0.468698791045168 NA intron (NM_008720, intron 1 of 24) intron (NM_008720, intron 1 of 24) 7293 NM_008720 18145 Mm.3484 NM_008720 ENSMUSG00000024413 Npc1 A430089E03Rik|C85354|D18Ertd139e|D18Ertd723e|lcsd|nmf164|spm Niemann-Pick type C1 protein-coding common_peak1_19_116_-0.179230491952628_6.78074947360709_0.468698791045168-8 chr7 16205357 16205836 + 0.468698791045168 NA intron (NM_027883, intron 8 of 16) intron (NM_027883, intron 8 of 16) 16397 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak1_21_103_0.159358024552859_6.78011873041752_0.468698791045168 chr9 59660043 59660606 + 0.468698791045168 NA intron (NM_001253883, intron 1 of 10) ID_B1|SINE|B4 3956 NM_001253883 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding common_peak1_19_116_-0.179230491952628_6.78074947360709_0.468698791045168-6 chr2 85013861 85014298 + 0.468698791045168 NA intron (NM_145526, intron 8 of 11) intron (NM_145526, intron 8 of 11) 21755 NM_145526 228139 Mm.440375 NM_145526 ENSMUSG00000027071 P2rx3 4930513E20Rik|P2X3 purinergic receptor P2X, ligand-gated ion channel, 3 protein-coding unique_peak2_19_116_-0.179230491952628_6.78074947360709_0.468698791045168-2 chr5 103360407 103361331 + 0.468698791045168 NA Intergenic Intergenic -61840 NR_040699 74624 Mm.389662 NR_040699 ENSMUSG00000104956 4930429D17Rik - RIKEN cDNA 4930429D17 gene ncRNA common_peak1_19_116_-0.179230491952628_6.78074947360709_0.468698791045168-7 chr5 142930370 142930936 + 0.468698791045168 NA Intergenic ID_B1|SINE|B4 -23899 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding unique_peak2_21_103_0.159358024552859_6.78011873041752_0.468698791045168 chr12 100958846 100959754 + 0.468698791045168 NA intron (NM_026681, intron 10 of 29) intron (NM_026681, intron 10 of 29) -51102 NM_001177673 238377 Mm.32160 NM_175493 ENSMUSG00000047415 Gpr68 BB131428|Ogr1 G protein-coupled receptor 68 protein-coding unique_peak2_21_103_0.159358024552859_6.78011873041752_0.468698791045168-2 chr14 120525278 120526080 + 0.468698791045168 NA Intergenic Intergenic 47218 NM_029519 76108 Mm.261448 NM_029519 ENSMUSG00000051615 Rap2a 5830461H18Rik RAS related protein 2a protein-coding common_peak1_19_116_-0.179230491952628_6.78074947360709_0.468698791045168-9 chr8 129263443 129263904 + 0.468698791045168 NA Intergenic Intergenic -29627 NM_153780 72139 Mm.426514 NM_153780 ENSMUSG00000071302 2610044O15Rik8 2610044O15Rik RIKEN cDNA 2610044O15 gene protein-coding common_peak2_21_103_0.159358024552859_6.78011873041752_0.468698791045168 chr3 66985560 66986253 + 0.468698791045168 NA intron (NM_025822, intron 1 of 9) CpG 234 NM_025822 66880 Mm.316418 NM_025822 ENSMUSG00000034544 Rsrc1 1200013F24Rik|SRrp53 arginine/serine-rich coiled-coil 1 protein-coding common_peak1_19_116_-0.179230491952628_6.78074947360709_0.468698791045168 chr1 87855192 87855689 + 0.468698791045168 NA intron (NM_177646, intron 1 of 29) MER5A1|DNA|hAT-Charlie 2153 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding unique_peak2_14_84_-0.227346814726354_6.29571752877452_0.468522704650658-6 chr8 70282935 70283698 + 0.468522704650658 NA intron (NM_011984, intron 1 of 9) CpG 317 NM_001146153 26558 Mm.388127 NM_011984 ENSMUSG00000003573 Homer3 AW146114 homer scaffolding protein 3 protein-coding unique_peak2_14_84_-0.227346814726354_6.29571752877452_0.468522704650658-3 chr2 27697133 27697915 + 0.468522704650658 NA intron (NM_011305, intron 1 of 9) intron (NM_011305, intron 1 of 9) -11768 NM_001290481 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding unique_peak2_14_84_-0.227346814726354_6.29571752877452_0.468522704650658 chr10 121476503 121477024 + 0.468522704650658 NA promoter-TSS (NM_138956) promoter-TSS (NM_138956) -513 NM_138956 192678 Mm.41265 NM_138956 ENSMUSG00000025795 Rassf3 AW212023|AW322379 Ras association (RalGDS/AF-6) domain family member 3 protein-coding common_peak1_14_84_-0.227346814726354_6.29571752877452_0.468522704650658 chr1 171661370 171661822 + 0.468522704650658 NA Intergenic MLT1A0|LTR|ERVL-MaLR -8559 NM_144539 75345 Mm.164642 NM_144539 ENSMUSG00000038179 Slamf7 19A|19A24|4930560D03Rik|CRACC|CS1 SLAM family member 7 protein-coding unique_peak2_14_84_-0.227346814726354_6.29571752877452_0.468522704650658-5 chr7 98664322 98665014 + 0.468522704650658 NA Intergenic Intergenic -8099 NM_172280 233545 Mm.387819 NM_172280 ENSMUSG00000035401 Emsy 2210018M11Rik|2310016L09Rik|AU019521|AU019557 EMSY, BRCA2-interacting transcriptional repressor protein-coding unique_peak2_14_84_-0.227346814726354_6.29571752877452_0.468522704650658-4 chr3 146775379 146776216 + 0.468522704650658 NA intron (NM_011100, intron 1 of 9) L1MB5|LINE|L1 -5104 NM_001164199 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding unique_peak2_14_84_-0.227346814726354_6.29571752877452_0.468522704650658-2 chr11 20132990 20133656 + 0.468522704650658 NA Intergenic Intergenic -20372 NM_146243 66713 Mm.259045 NM_146243 ENSMUSG00000020152 Actr2 4921510D23Rik|AA409782|Arp2|D6Ertd746e ARP2 actin-related protein 2 protein-coding common_peak1_75_560_-0.07826813483919_9.0927228931892_0.468438190918546 chr11 57444869 57445975 + 0.468438190918546 NA Intergenic Intergenic 73222 NM_001168667 67726 Mm.25632 NM_026342 ENSMUSG00000020523 Fam114a2 1810073G14Rik|9030624B09Rik family with sequence similarity 114, member A2 protein-coding common_peak2_486_5098_0.0247277555796224_12.3283625004184_0.46826818354499 chr10 19575173 19585352 + 0.46826818354499 NA Intergenic Intergenic -11696 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding common_peak1_50_304_0.0950053446772081_8.30016810478885_0.467888147425038 chr3 131564683 131565435 + 0.467888147425038 NA promoter-TSS (NM_001289477) promoter-TSS (NM_001289477) 291 NM_011863 23971 Mm.244912 NM_011863 ENSMUSG00000028032 Papss1 AI325286|Asapk|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding common_peak2_83_571_0.0708279293928218_9.1952853014748_0.467799504487539 chr7 29179509 29181291 + 0.467799504487539 NA exon (NM_026545, exon 1 of 7) exon (NM_026545, exon 1 of 7) 273 NM_026545 57296 Mm.273152 NM_026545 ENSMUSG00000030591 Psmd8 6720456J22Rik|AA407360|AL033291|AL033322|AL033323|C76433 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 protein-coding common_peak1_70_462_0.0782911625867815_8.89401396455363_0.467509083009753 chr2 125858402 125859163 + 0.467509083009753 NA promoter-TSS (NM_175154) promoter-TSS (NM_175154) 300 NM_009939 12848 Mm.3596 NM_009939 ENSMUSG00000027206 Cops2 AI315723|C85265|Csn2|Sgn2|TRIP-15|Trip15 COP9 signalosome subunit 2 protein-coding common_peak1_117_875_0.0573516566270076_9.80346288791468_0.467395869651941 chr1 172205824 172207103 + 0.467395869651941 NA intron (NM_011063, intron 1 of 3) intron (NM_011063, intron 1 of 3) 318 NM_011063 18611 Mm.544 NM_011063 ENSMUSG00000013698 Pea15a Mat1|PEA-15|Pea15|Pkcs15 phosphoprotein enriched in astrocytes 15A protein-coding common_peak2_117_875_0.0573516566270076_9.80346288791468_0.467395869651941 chr1 36571839 36573073 + 0.467395869651941 NA intron (NM_027957, intron 3 of 5) intron (NM_027957, intron 3 of 5) -14075 NM_001126047 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding common_peak1_51_357_-0.101782221436968_8.43292466654577_0.467299331019056 chr11 83941956 83942905 + 0.467299331019056 NA intron (NM_030096, intron 1 of 14) intron (NM_030096, intron 1 of 14) 340 NM_030096 78394 Mm.280544 NM_030096 ENSMUSG00000020677 Ddx52 2700029C06Rik|ROK1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 protein-coding common_peak2_51_357_-0.101782221436968_8.43292466654577_0.467299331019056 chr17 46772263 46773543 + 0.467299331019056 NA exon (NM_025966, exon 1 of 1) exon (NM_025966, exon 1 of 1) 268 NM_025966 67101 Mm.358702 NM_025966 ENSMUSG00000062619 2310039H08Rik - RIKEN cDNA 2310039H08 gene protein-coding common_peak1_102_738_0.0621173296305884_9.56048921896144_0.467283920182774 chr9 90264302 90265575 + 0.467283920182774 NA intron (NM_194334, intron 1 of 12) intron (NM_194334, intron 1 of 12) 5831 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak2_245_2304_-0.0383609429116341_11.1513705638609_0.467200745177949 chr13 100650193 100652510 + 0.467200745177949 NA promoter-TSS (NM_001283011) promoter-TSS (NM_001283011) 8 NM_027592 102216272 Mm.301148 NM_027592 ENSMUSG00000078941 Ak6 2810046E22Rik|4921516M08Rik|AK/ATPase adenylate kinase 6 protein-coding common_peak2_252_2383_-0.0373263032407998_11.2005053688418_0.467147982856545 chr17 66075412 66078006 + 0.467147982856545 NA intron (NM_001025572, intron 1 of 12) CpG 337 NM_001025572 106585 Mm.34706 NM_001025572 ENSMUSG00000034647 Ankrd12 2900001A12Rik|AI447928|ANCO-2|AV347965|GAC-1|mKIAA0874 ankyrin repeat domain 12 protein-coding common_peak1_66_429_0.0823508505602639_8.78936827486959_0.467107717299475 chr5 143464031 143465147 + 0.467107717299475 NA promoter-TSS (NM_144915) promoter-TSS (NM_144915) 96 NM_144915 231871 Mm.469963 NM_144915 ENSMUSG00000039206 Daglb E330036I19Rik diacylglycerol lipase, beta protein-coding common_peak1_372_3816_-0.0294314472539572_11.8835077475886_0.467025709375852 chr2 154656920 154660079 + 0.467025709375852 NA intron (NM_029362, intron 1 of 4) intron (NM_029362, intron 1 of 4) 1473 NM_029362 75608 Mm.262480 NM_029362 ENSMUSG00000038467 Chmp4b 2010012F05Rik|C76846|Snf7-2 charged multivesicular body protein 4B protein-coding common_peak2_364_3717_-0.0298864416555329_11.8453678340917_0.467013740250132 chr2 163638495 163645955 + 0.467013740250132 NA intron (NM_012032, intron 1 of 9) ORR1A3|LTR|ERVL-MaLR -2625 NR_028113 68386 Mm.410649 NR_028113 ENSMUSG00000058812 0610039K10Rik - RIKEN cDNA 0610039K10 gene ncRNA common_peak1_55_389_-0.094153252545329_8.56025368747695_0.466942382809534 chr4 59223823 59224897 + 0.466942382809534 NA Intergenic B3|SINE|B2 34810 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak2_43_252_0.103416479185997_8.03470181428731_0.466831518368675 chr8 110618144 110619245 + 0.466831518368675 NA promoter-TSS (NM_146216) promoter-TSS (NM_146216) 56 NM_146216 234729 Mm.274894 NM_146216 ENSMUSG00000010936 Vac14 AA959718|BC032215|D8Wsu151e|Tax1bp2|Trx|ingls Vac14 homolog (S. cerevisiae) protein-coding common_peak1_67_491_-0.0857536219923567_8.89963769434306_0.466811602130209 chr13 37434168 37434955 + 0.466811602130209 NA Intergenic Intergenic 89216 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding common_peak1_37_246_-0.121390717001431_7.88767187308396_0.466804306012427 chr8 46842227 46842993 + 0.466804306012427 NA intron (NM_008391, intron 7 of 8) intron (NM_008391, intron 7 of 8) 102865 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_62_397_0.0849845394081328_8.67911689024772_0.466766393464885 chr9 45240919 45242129 + 0.466766393464885 NA intron (NM_001198971, intron 2 of 4) intron (NM_001198971, intron 2 of 4) 25183 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak2_63_456_-0.0865724695601902_8.79276412027798_0.466732716228664 chr9 4375527 4377240 + 0.466732716228664 NA Intergenic Intergenic -7154 NM_145609 78100 Mm.206549 NM_145609 ENSMUSG00000041124 Msantd4 8430410K20Rik|Mysantd4 Myb/SANT-like DNA-binding domain containing 4 with coiled-coils protein-coding common_peak2_33_181_0.122353931961831_7.56897160617961_0.466667497519023-2 chr8 122575686 122577060 + 0.466667497519023 NA intron (NM_009698, intron 2 of 4) intron (NM_009698, intron 2 of 4) 534 NM_009698 11821 Mm.1786 NM_009698 ENSMUSG00000006589 Aprt C85684 adenine phosphoribosyl transferase protein-coding common_peak2_33_181_0.122353931961831_7.56897160617961_0.466667497519023 chr6 123288700 123290025 + 0.466667497519023 NA intron (NM_019948, intron 1 of 5) intron (NM_019948, intron 1 of 5) 509 NM_019948 56619 Mm.248327 NM_019948 ENSMUSG00000030142 Clec4e C86253|Clecsf9|Mincle C-type lectin domain family 4, member e protein-coding common_peak1_33_181_0.122353931961831_7.56897160617961_0.466667497519023 chr18 34373581 34374211 + 0.466667497519023 NA promoter-TSS (NM_007874) promoter-TSS (NM_007874) -481 NM_007874 13476 Mm.280075 NM_007874 ENSMUSG00000005873 Reep5 AI324241|AU022809|AW495741|DP1/TB2|Dp1|R74856|TB2/DP1 receptor accessory protein 5 protein-coding common_peak1_79_537_0.0728964874468652_9.10791060628006_0.466616464728045 chr17 73301124 73302376 + 0.466616464728045 NA Intergenic Intergenic 97546 NM_001033444 381122 Mm.81496 NM_001033444 ENSMUSG00000043705 Capn13 CANP 13|Gm943 calpain 13 protein-coding common_peak1_128_978_0.0546966368035378_9.96251336800546_0.466594904591258 chr6 73248003 73249192 + 0.466594904591258 NA promoter-TSS (NM_019879) promoter-TSS (NM_019879) 92 NM_019879 56451 Mm.29845 NM_019879 ENSMUSG00000052738 Suclg1 1500000I01Rik|Sucla1 succinate-CoA ligase, GDP-forming, alpha subunit protein-coding common_peak1_44_300_-0.10744103919507_8.17989915716217_0.466458216155951 chr5 96948643 96949430 + 0.466458216155951 NA Intergenic Intergenic 27764 NR_131152 666266 Mm.32442 NR_131152 ENSMUSG00000106357 Gm8013 EG666266 predicted gene 8013 ncRNA unique_peak2_16_74_0.174717570478292_6.31617747573503_0.466412485092343 chr7 90362415 90363029 + 0.466412485092343 NA intron (NM_001289583, intron 4 of 19) intron (NM_001289583, intron 4 of 19) -24259 NM_001040087 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak1_16_74_0.174717570478292_6.31617747573503_0.466412485092343 chr3 51554194 51554685 + 0.466412485092343 NA intron (NM_080793, intron 1 of 7) intron (NM_080793, intron 1 of 7) -5318 NR_033624 100039684 Mm.387178 NR_033624 5031434O11Rik AI481280|Gm2370 RIKEN cDNA 5031434O11 gene ncRNA common_peak1_59_423_-0.0926517107791387_8.68159459917363_0.466362525702279 chr5 135709511 135710730 + 0.466362525702279 NA intron (NM_008898, intron 1 of 15) MTD|LTR|ERVL-MaLR 20975 NM_008898 18984 Mm.3863 NM_008898 ENSMUSG00000005514 Por 4933424M13Rik|CPR|CYPOR|P450R P450 (cytochrome) oxidoreductase protein-coding common_peak1_192_1617_0.0428094000162815_10.6814005924381_0.466343356841114 chr9 57632451 57635085 + 0.466343356841114 NA intron (NM_007783, intron 1 of 12) intron (NM_007783, intron 1 of 12) 11885 NM_007783 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding common_peak2_94_732_-0.0691995978585993_9.48306958920451_0.466295061555003 chr14 25841579 25843170 + 0.466295061555003 NA intron (NM_013469, intron 1 of 14) CpG 219 NM_013469 11744 Mm.294083 NM_013469 ENSMUSG00000021866 Anxa11 A830099O17Rik|Anx11 annexin A11 protein-coding common_peak1_94_732_-0.0691995978585993_9.48306958920451_0.466295061555003 chr1 43537246 43538989 + 0.466295061555003 NA intron (NM_010879, intron 3 of 4) intron (NM_010879, intron 3 of 4) 92366 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_24_122_0.143500686797144_7.01426484873781_0.466075619126616-3 chr2 152804390 152804990 + 0.466075619126616 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 26027 NM_001289716 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_24_122_0.143500686797144_7.01426484873781_0.466075619126616 chr1 181235665 181236294 + 0.466075619126616 NA Intergenic B1_Mur1|SINE|Alu -24001 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding unique_peak2_24_122_0.143500686797144_7.01426484873781_0.466075619126616 chr13 62652768 62653665 + 0.466075619126616 NA Intergenic Intergenic -29034 NM_173381 211378 Mm.247448 NM_173381 ENSMUSG00000072066 6720489N17Rik 9330128I06 RIKEN cDNA 6720489N17 gene protein-coding common_peak1_24_122_0.143500686797144_7.01426484873781_0.466075619126616-2 chr17 28966857 28967455 + 0.466075619126616 NA 3' UTR (NM_025888, exon 8 of 8) 3' UTR (NM_025888, exon 8 of 8) 13940 NM_025888 66989 Mm.435 NM_025888 ENSMUSG00000005936 Kctd20 2410004N11Rik|AI451943|AW541186|D17Ertd562e potassium channel tetramerisation domain containing 20 protein-coding unique_peak2_24_122_0.143500686797144_7.01426484873781_0.466075619126616-2 chr5 105235740 105236945 + 0.466075619126616 NA intron (NM_001039646, intron 1 of 10) intron (NM_001039646, intron 1 of 10) 3191 NM_001039646 626578 Mm.275893 NM_001039646 ENSMUSG00000105096 Gbp10 - guanylate-binding protein 10 protein-coding common_peak1_118_884_0.0575387252692838_9.818303007605_0.465736585778658 chr18 60746494 60748945 + 0.465736585778658 NA Intergenic Intergenic -26877 NM_020600 20044 Mm.43778 NM_020600 ENSMUSG00000024608 Rps14 2600014J02Rik|AL023078 ribosomal protein S14 protein-coding unique_peak2_12_71_-0.241116067987735_6.04936696744844_0.465693198848464-2 chr9 44031403 44031909 + 0.465693198848464 NA Intergenic Intergenic -11728 NM_009382 21838 Mm.3951 NM_009382 ENSMUSG00000032011 Thy1 CD90|T25|Thy-1|Thy-1.2|Thy1.1|Thy1.2 thymus cell antigen 1, theta protein-coding common_peak2_12_71_-0.241116067987735_6.04936696744844_0.465693198848464 chr9 40415211 40415773 + 0.465693198848464 NA intron (NM_172768, intron 1 of 19) RSINE1|SINE|B4 40272 NM_172768 235283 Mm.138434 NM_172768 ENSMUSG00000040111 Gramd1b 3222402H23|A930008A22Rik|AI593249|mKIAA1201 GRAM domain containing 1B protein-coding unique_peak2_12_71_-0.241116067987735_6.04936696744844_0.465693198848464 chr16 90934935 90935557 + 0.465693198848464 NA promoter-TSS (NM_026502) promoter-TSS (NM_026502) -397 NM_026502 68001 Mm.45374 NM_026502 ENSMUSG00000022972 1110004E09Rik - RIKEN cDNA 1110004E09 gene protein-coding common_peak1_27_141_0.136817630513243_7.2181559347613_0.46560548835892-3 chr6 108213002 108213601 + 0.46560548835892 NA 5' UTR (NM_010585, exon 1 of 62) 5' UTR (NM_010585, exon 1 of 62) 205 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|ENSMUSG00000072853|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding common_peak1_27_141_0.136817630513243_7.2181559347613_0.46560548835892 chr11 82214524 82215189 + 0.46560548835892 NA Intergenic Intergenic -35044 NM_011329 20290 Mm.1283 NM_011329 ENSMUSG00000020702 Ccl1 BF534335|I-309|Scya1|Tca-3 chemokine (C-C motif) ligand 1 protein-coding common_peak1_27_141_0.136817630513243_7.2181559347613_0.46560548835892-2 chr11 115708723 115709206 + 0.46560548835892 NA promoter-TSS (NM_008163) promoter-TSS (NM_008163) -367 NM_008163 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding common_peak1_30_161_0.126832201849682_7.40326610380947_0.465558023409884 chr19 40709090 40709709 + 0.465558023409884 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 49629 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak1_30_161_0.126832201849682_7.40326610380947_0.465558023409884-2 chr2 120352393 120353113 + 0.465558023409884 NA intron (NM_147153, intron 1 of 25) CpG 380 NM_178851 269338 Mm.246131 NM_147153 ENSMUSG00000027291 Vps39 A230065P22Rik|AW743070|Vam6|Vam6P|mVam6 VPS39 HOPS complex subunit protein-coding common_peak2_212_1828_0.0404547022515853_10.8570667108745_0.465491403018751 chr10 18915799 18918912 + 0.465491403018751 NA Intergenic Intergenic 72284 NM_022032 64058 Mm.28209 NM_022032 ENSMUSG00000019851 Perp 1110017A08Rik|KCP1|KRTCAP1|PIGPC1|THW PERP, TP53 apoptosis effector protein-coding common_peak1_373_3677_0.0288242208764427_11.8591178748502_0.465449699490828 chr9 101074022 101077164 + 0.465449699490828 NA intron (NM_001100451, intron 1 of 1) CpG 831 NM_001100451 77853 Mm.326206 NM_001100451 ENSMUSG00000066415 Msl2 E130103E02Rik|Msl2l1|Rnf184 male-specific lethal 2 homolog (Drosophila) protein-coding common_peak2_232_2044_0.0382264330447377_11.0169983443515_0.465362639282442 chr11 75152377 75155344 + 0.465362639282442 NA intron (NM_001002764, intron 15 of 18) intron (NM_001002764, intron 15 of 18) 14292 NM_001098203 15248 Mm.57250 NM_010430 ENSMUSG00000043099 Hic1 AA408311|HIC-1 hypermethylated in cancer 1 protein-coding common_peak2_103_747_0.0617514071260068_9.57777016345064_0.465325106283871 chr15 58871893 58873532 + 0.465325106283871 NA promoter-TSS (NM_026642) promoter-TSS (NM_026642) 63 NM_026642 68260 Mm.278805 NM_026642 ENSMUSG00000037085 Trmt12 4632406N01Rik|AI449275|Tyw2 tRNA methyltranferase 12 protein-coding common_peak2_103_747_0.0617514071260068_9.57777016345064_0.465325106283871-2 chr17 35125466 35127551 + 0.465325106283871 NA intron (NM_033477, intron 1 of 2) CpG 106 NM_033477 114585 Mm.42070 NM_033477 ENSMUSG00000043311 D17H6S53E G4|NG34 DNA segment, Chr 17, human D6S53E protein-coding common_peak1_84_580_0.0692474944479624_9.21701810062851_0.465276401762388 chr7 56050145 56050959 + 0.465276401762388 NA intron (NM_010418, intron 1 of 92) intron (NM_010418, intron 1 of 92) 397 NM_010418 15204 Mm.20929 NM_010418 ENSMUSG00000030451 Herc2 D15F32S1h|D7H15F32S1|D7H15F37S1|jdf2|mKIAA0393|rjs HECT and RLD domain containing E3 ubiquitin protein ligase 2 protein-coding common_peak1_151_1201_0.0489799562447715_10.2557111588336_0.465253287542143 chr4 34882237 34883499 + 0.465253287542143 NA promoter-TSS (NM_013889) promoter-TSS (NM_013889) 80 NM_013889 30046 Mm.38193 NM_013889 ENSMUSG00000039967 Zfp292 5730450D02Rik|5830493J20Rik|9430062L07Rik|AI449016|Krox-10|Zfp-15|Zfp15|Zn-15|Zn-16|mKIAA0530 zinc finger protein 292 protein-coding common_peak1_157_1260_0.0483588419714529_10.3245319813139_0.464999455354109 chr10 95563171 95565122 + 0.464999455354109 NA promoter-TSS (NM_027722) promoter-TSS (NM_027722) 21 NM_027722 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak2_342_3303_0.0304143747567096_11.7052051587978_0.464974861826276 chr10 128501485 128506356 + 0.464974861826276 NA non-coding (NR_131151, exon 2 of 2) non-coding (NR_131151, exon 2 of 2) 4673 NR_131151 654440 Mm.441262 NR_131150 ENSMUSG00000097353 A430046D13Rik - Riken cDNA A430046D13 gene ncRNA common_peak2_140_1093_0.0518685807867456_10.1213313131859_0.464947883083773 chr9 41207085 41208351 + 0.464947883083773 NA intron (NR_040392, intron 1 of 4) intron (NR_040392, intron 1 of 4) 1563 NR_040392 78500 Mm.275715 NR_040392 ENSMUSG00000100837 1700063D05Rik - RIKEN cDNA 1700063D05 gene ncRNA common_peak1_163_1320_0.0472531361913102_10.3910413193425_0.464807928955259 chr5 24746990 24749007 + 0.464807928955259 NA Intergenic RMER19A|LTR|ERVK 9845 NM_153076 214301 Mm.63484 NM_153076 ENSMUSG00000038135 Crygn - crystallin, gamma N protein-coding common_peak2_22_137_-0.170063652684659_7.02349263043584_0.464804803360077 chr1 45734232 45735154 + 0.464804803360077 NA Intergenic IAPEz-int|LTR|ERVK -60808 NM_028599 73674 Mm.270376 NM_028599 ENSMUSG00000025995 Wdr75 1300003A18Rik|2410118I19Rik|C77608 WD repeat domain 75 protein-coding common_peak1_22_137_-0.170063652684659_7.02349263043584_0.464804803360077-2 chr6 122258571 122258978 + 0.464804803360077 NA Intergenic Intergenic 24059 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding unique_peak2_22_137_-0.170063652684659_7.02349263043584_0.464804803360077-2 chr2 173431624 173432883 + 0.464804803360077 NA Intergenic MLTR12|LTR|ERV1 -90339 NM_028158 72221 Mm.46132 NM_028158 ENSMUSG00000027518 1700021F07Rik - RIKEN cDNA 1700021F07 gene protein-coding unique_peak2_22_137_-0.170063652684659_7.02349263043584_0.464804803360077 chr10 58354456 58355373 + 0.464804803360077 NA intron (NM_026148, intron 1 of 9) intron (NM_026148, intron 1 of 9) -16540 NM_201242 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak2_22_137_-0.170063652684659_7.02349263043584_0.464804803360077-2 chr12 13268913 13269815 + 0.464804803360077 NA intron (NM_027706, intron 1 of 51) intron (NM_027706, intron 1 of 51) 237 NM_027706 71169 Mm.177520 NM_027706 ENSMUSG00000020576 Nbas 4933425L03Rik|Nag neuroblastoma amplified sequence protein-coding common_peak1_22_137_-0.170063652684659_7.02349263043584_0.464804803360077 chr15 10034915 10035412 + 0.464804803360077 NA Intergenic ID4_|SINE|ID -142075 NM_011169 19116 Mm.10516 NM_011169 ENSMUSG00000005268 Prlr AI987712|Pr-1|Pr-3|Prlr-rs1 prolactin receptor protein-coding common_peak1_40_230_0.109694223649369_7.90659615324074_0.464726704020066-2 chr7 118129775 118130401 + 0.464726704020066 NA promoter-TSS (NM_019419) promoter-TSS (NM_019419) -463 NM_019419 54208 Mm.29924 NM_019419 ENSMUSG00000030654 Arl6ip1 AIP-6|AL022945|ARMER|AU042858|Aip-1|Arl6ip|C85138|mKIAA0069 ADP-ribosylation factor-like 6 interacting protein 1 protein-coding common_peak1_40_230_0.109694223649369_7.90659615324074_0.464726704020066 chr7 102686806 102687457 + 0.464726704020066 NA intron (NM_001307998, intron 1 of 5) intron (NM_001307998, intron 1 of 5) 196 NM_198012 101700 Mm.39043 NM_198012 ENSMUSG00000073968 Trim68 AI894158|F730114J12Rik|Rnf137|SS-56 tripartite motif-containing 68 protein-coding common_peak1_200_1701_0.0416628946170423_10.7538467689945_0.464603847477547 chr17 51811966 51813893 + 0.464603847477547 NA promoter-TSS (NM_001163630) promoter-TSS (NM_001163630) -875 NM_001163630 20230 Mm.311655 NM_009122 ENSMUSG00000023927 Satb1 2610306G12Rik|AW413156 special AT-rich sequence binding protein 1 protein-coding common_peak2_124_940_0.0560698662861672_9.90608584587162_0.464523808322313 chr4 140769952 140772842 + 0.464523808322313 NA intron (NM_011061, intron 1 of 15) intron (NM_011061, intron 1 of 15) 2806 NM_011061 18602 Mm.250358 NM_011061 ENSMUSG00000025330 Padi4 Pad4|Pdi4 peptidyl arginine deiminase, type IV protein-coding common_peak2_81_613_-0.074039269118396_9.22507521081098_0.464452249818136 chr19 11965493 11966806 + 0.464452249818136 NA exon (NM_001033174, exon 1 of 14) exon (NM_001033174, exon 1 of 14) 305 NM_001033174 76303 Mm.291279 NM_001033174 ENSMUSG00000024687 Osbp 1110018F06Rik|AW559088|mKIAA4220 oxysterol binding protein protein-coding common_peak2_95_741_-0.0682752861559948_9.50113773354281_0.464241722079125 chr1 175880225 175881318 + 0.464241722079125 NA promoter-TSS (NM_012012) promoter-TSS (NM_012012) -7 NM_012012 26909 Mm.283046 NM_012012 ENSMUSG00000039748 Exo1 5730442G03Rik|Msa exonuclease 1 protein-coding common_peak1_95_741_-0.0682752861559948_9.50113773354281_0.464241722079125 chr15 83602517 83603499 + 0.464241722079125 NA 3' UTR (NM_022723, exon 22 of 22) 3' UTR (NM_022723, exon 22 of 22) -7851 NM_183017 223723 Mm.46778 NM_183017 ENSMUSG00000016757 Ttll12 BC055368|D430005B17 tubulin tyrosine ligase-like family, member 12 protein-coding common_peak1_31_201_-0.135345908440271_7.59053852853166_0.464084440796763 chr17 94864607 94865422 + 0.464084440796763 NA promoter-TSS (NM_001024731) promoter-TSS (NM_001024731) 96 NM_001024731 100044193 NM_001024731 ENSMUSG00000095193 Gm20939 - predicted gene, 20939 protein-coding unique_peak2_31_201_-0.135345908440271_7.59053852853166_0.464084440796763 chr10 80386812 80388218 + 0.464084440796763 NA 5' UTR (NM_198615, exon 1 of 2) 5' UTR (NM_198615, exon 1 of 2) 136 NM_198615 237400 Mm.268389 NM_198615 ENSMUSG00000048696 Mex3d BC059858|Rkhd1 mex3 RNA binding family member D protein-coding common_peak1_31_201_-0.135345908440271_7.59053852853166_0.464084440796763-2 chr5 124943772 124944388 + 0.464084440796763 NA Intergenic Intergenic -59395 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak1_68_499_-0.0831889644152923_8.92418980245444_0.46407916607774 chr9 108936515 108937502 + 0.46407916607774 NA intron (NM_025407, intron 1 of 12) CpG 360 NM_025407 22273 Mm.335460 NM_025407 ENSMUSG00000025651 Uqcrc1 1110032G10Rik ubiquinol-cytochrome c reductase core protein 1 protein-coding common_peak2_207_1775_0.0408423118498948_10.8148370222751_0.464046802016586 chr4 134546486 134549455 + 0.464046802016586 NA exon (NM_029100, exon 3 of 12) exon (NM_029100, exon 3 of 12) 4196 NM_029100 74777 Mm.29773 NM_029100 ENSMUSG00000050989 Selenon 1110019I12Rik|AI414492|SelN|Sepn1 selenoprotein N protein-coding common_peak2_100_787_-0.0652036258509181_9.58945000653092_0.464044675753334 chr16 4885540 4888070 + 0.464044675753334 NA intron (NM_029657, intron 1 of 16) intron (NM_029657, intron 1 of 16) 705 NM_001252437 17237 Mm.291326 NM_029657 ENSMUSG00000022517 Mgrn1 2610042J20Rik|mKIAA0544|md|nc mahogunin, ring finger 1 protein-coding common_peak1_52_364_-0.0960108883242672_8.46374720960524_0.463996344532525 chr10 89746882 89747677 + 0.463996344532525 NA intron (NM_029166, intron 1 of 20) PB1D9|SINE|Alu 2288 NM_029166 75089 Mm.268922 NM_029166 ENSMUSG00000019951 Uhrf1bp1l 2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701 UHRF1 (ICBP90) binding protein 1-like protein-coding common_peak1_119_894_0.056137182818798_9.83381246356102_0.463931333309124 chr2 178326931 178328562 + 0.463931333309124 NA intron (NM_001177790, intron 8 of 12) intron (NM_001177790, intron 8 of 12) 79912 NM_177191 320558 Mm.70781 NM_177191 ENSMUSG00000060445 Sycp2 3830402K23Rik|4930518F03Rik synaptonemal complex protein 2 protein-coding common_peak2_336_3232_0.0305250230175442_11.6739203036349_0.46387692480281 chr9 13465047 13471042 + 0.46387692480281 NA Intergenic B1_Mur1|SINE|Alu 36683 NR_028271 18689 Mm.41972 NM_008835 ENSMUSG00000031802 Phxr4 Sp5 per-hexamer repeat gene 4 ncRNA common_peak2_222_2045_-0.0401065557909259_10.9785371518499_0.463828197928334 chr3 123506832 123509576 + 0.463828197928334 NA promoter-TSS (NR_028573) promoter-TSS (NR_028573) 132 NR_028574 69895 Mm.260791 NR_028574 ENSMUSG00000104960 Snhg8 1110065M07Rik|2010109N14Rik small nucleolar RNA host gene 8 ncRNA common_peak1_67_438_0.078683753811525_8.81741900644112_0.463792600003902-2 chr4 145253672 145254745 + 0.463792600003902 NA Intergenic Intergenic -7338 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_67_438_0.078683753811525_8.81741900644112_0.463792600003902 chr17 78248199 78249892 + 0.463792600003902 NA intron (NM_015800, intron 2 of 16) intron (NM_015800, intron 2 of 16) 48797 NM_015800 50766 Mm.311912 NM_015800 ENSMUSG00000024074 Crim1 AU015004 cysteine rich transmembrane BMP regulator 1 (chordin like) protein-coding common_peak1_67_438_0.078683753811525_8.81741900644112_0.463792600003902 chr1 91458584 91459382 + 0.463792600003902 NA intron (NM_011066, intron 1 of 22) MIRb|SINE|MIR 345 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding common_peak1_51_312_0.0920147088946699_8.33602620137995_0.463753818588387 chr11 115164574 115165210 + 0.463753818588387 NA intron (NM_012030, intron 1 of 5) intron (NM_012030, intron 1 of 5) 1551 NM_012030 26941 Mm.27842 NM_012030 ENSMUSG00000020733 Slc9a3r1 EBP-50|NHE-RF|NHERF-1|NHERF1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 protein-coding common_peak1_114_847_0.0586459364086309_9.75724342276751_0.463713890637247 chr19 59942745 59943737 + 0.463713890637247 NA 5' UTR (NM_001033172, exon 1 of 6) 5' UTR (NM_001033172, exon 1 of 6) 123 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak1_28_179_-0.143189781817107_7.42025820542112_0.463632304793368 chr2 154569243 154569837 + 0.463632304793368 NA promoter-TSS (NM_001291105) promoter-TSS (NM_001291105) -114 NM_001291105 13555 Mm.18036 NM_007891 ENSMUSG00000027490 E2f1 E2F-1|mKIAA4009 E2F transcription factor 1 protein-coding common_peak2_28_179_-0.143189781817107_7.42025820542112_0.463632304793368 chr4 155666605 155667569 + 0.463632304793368 NA 5' UTR (NM_145124, exon 2 of 19) 5' UTR (NM_145124, exon 2 of 19) 2167 NM_001256108 76580 Mm.235738 NM_145124 ENSMUSG00000029060 Mib2 2210008I11Rik|Zzank1|skd mindbomb E3 ubiquitin protein ligase 2 protein-coding common_peak1_444_4561_0.0256732243303688_12.1682873434773_0.463544674011868 chr10 61275984 61279232 + 0.463544674011868 NA Intergenic Intergenic -4170 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak1_55_342_0.0911122950314684_8.46762091368855_0.463535173502251 chr16 58501839 58502714 + 0.463535173502251 NA intron (NM_018784, intron 2 of 10) C-rich|Low_complexity|Low_complexity 21036 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding common_peak2_55_342_0.0911122950314684_8.46762091368855_0.463535173502251 chr5 140701441 140702900 + 0.463535173502251 NA intron (NM_028833, intron 1 of 22) CpG 208 NM_028833 74239 Mm.179704 NM_028833 ENSMUSG00000036555 Iqce 1700028P05Rik|mKIAA1023 IQ motif containing E protein-coding unique_peak2_25_158_-0.157461710643424_7.23415209996264_0.463416613078058 chr5 142816520 142817699 + 0.463416613078058 NA intron (NM_001122730, intron 1 of 27) CpG-11746 278 NM_178242 231861 Mm.354649 NM_178242 ENSMUSG00000039477 Tnrc18 BC025631|EG381742|Zfp469 trinucleotide repeat containing 18 protein-coding common_peak1_25_158_-0.157461710643424_7.23415209996264_0.463416613078058 chr11 22692212 22692726 + 0.463416613078058 NA Intergenic MLT1D|LTR|ERVL-MaLR 167266 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak1_25_158_-0.157461710643424_7.23415209996264_0.463416613078058-3 chr6 120492181 120492761 + 0.463416613078058 NA exon (NM_033567, exon 1 of 1) exon (NM_033567, exon 1 of 1) 1336 NM_033567 94047 Mm.23088 NM_033567 ENSMUSG00000094626 Cecr6 AW048664 cat eye syndrome chromosome region, candidate 6 protein-coding common_peak1_25_158_-0.157461710643424_7.23415209996264_0.463416613078058-2 chr11 115132208 115132797 + 0.463416613078058 NA intron (NM_145634, intron 1 of 6) L1MA4|LINE|L1 1490 NM_001169153 246746 Mm.277387 NM_145634 ENSMUSG00000047798 Cd300lf CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3 CD300 molecule like family member F protein-coding common_peak2_172_1504_-0.0463372401545161_10.5323791515698_0.463035534330928 chr1 171328189 171330865 + 0.463035534330928 NA intron (NM_011615, intron 1 of 4) (CGGGG)n|Simple_repeat|Simple_repeat 382 NM_011615 21945 Mm.270139 NM_011615 ENSMUSG00000013973 Dedd CASP8IP1|DEFT|Dedpro1|FLDED1|KE05 death effector domain-containing protein-coding common_peak2_228_2001_0.03824163592218_10.9863470767971_0.462945333622851 chr5 96916159 96920139 + 0.462945333622851 NA Intergenic Intergenic -3123 NR_131152 666266 Mm.32442 NR_131152 ENSMUSG00000106357 Gm8013 EG666266 predicted gene 8013 ncRNA unique_peak2_10_59_-0.273705164100923_5.77003801355806_0.462580151197411 chr4 126279995 126280580 + 0.462580151197411 NA Intergenic B1_Mus1|SINE|Alu -6507 NM_199473 329941 Mm.296327 NM_199473 ENSMUSG00000056174 Col8a2 AI429819 collagen, type VIII, alpha 2 protein-coding common_peak1_10_59_-0.273705164100923_5.77003801355806_0.462580151197411 chr18 58659121 58659444 + 0.462580151197411 NA promoter-TSS (NM_025478) promoter-TSS (NM_025478) -200 NM_025478 66307 Mm.182574 NM_025478 ENSMUSG00000024601 Isoc1 2610034N03Rik isochorismatase domain containing 1 protein-coding common_peak2_37_209_0.112730996917124_7.77061101612468_0.462442164105415 chr10 96586415 96587732 + 0.462442164105415 NA Intergenic Intergenic -29928 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding common_peak1_300_2810_0.0323955411390777_11.4730655089499_0.462413827375903 chr1 131198186 131200800 + 0.462413827375903 NA intron (NM_018750, intron 2 of 5) intron (NM_018750, intron 2 of 5) 692 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak2_19_91_0.167572271573763_6.60734809184389_0.46231439386471 chr11 100843016 100843977 + 0.46231439386471 NA intron (NM_001113563, intron 1 of 18) B4|SINE|B4 7089 NM_001113563 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding common_peak1_17_103_-0.195754356268425_6.60256254000688_0.46231439386471 chr9 57652062 57652462 + 0.46231439386471 NA intron (NM_001304761, intron 1 of 14) ID_B1|SINE|B4 1369 NM_001304761 12988 Mm.21974 NM_007783 ENSMUSG00000032312 Csk AW212630|p50CSK c-src tyrosine kinase protein-coding unique_peak2_17_103_-0.195754356268425_6.60256254000688_0.46231439386471-2 chr7 101345628 101346711 + 0.46231439386471 NA 3' UTR (NM_019990, exon 7 of 7) 3' UTR (NM_019990, exon 7 of 7) -1900 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_19_91_0.167572271573763_6.60734809184389_0.46231439386471 chr12 92892287 92892786 + 0.46231439386471 NA Intergenic Lx2|LINE|L1 552287 NR_126436 75295 Mm.243878 NR_126436 4930559C10Rik - RIKEN cDNA 4930559C10 gene ncRNA unique_peak2_19_91_0.167572271573763_6.60734809184389_0.46231439386471 chr15 76817505 76818170 + 0.46231439386471 NA intron (NM_198420, intron 1 of 10) CpG 333 NM_001168288 223666 Mm.322931 NM_198420 ENSMUSG00000033697 Arhgap39 9530053N22|AI843066|D15Wsu169e|Kiaa1688|Porf-2 Rho GTPase activating protein 39 protein-coding common_peak1_19_91_0.167572271573763_6.60734809184389_0.46231439386471-4 chr18 73541422 73541821 + 0.46231439386471 NA Intergenic Intergenic -31084 NM_001039214 240396 Mm.24131 NM_001039214 ENSMUSG00000037253 Mex3c A130001D14Rik|BC035207|BM-013|Rkhd2 mex3 RNA binding family member C protein-coding unique_peak2_17_103_-0.195754356268425_6.60256254000688_0.46231439386471 chr2 109277762 109278448 + 0.46231439386471 NA intron (NM_029790, intron 1 of 5) intron (NM_029790, intron 1 of 5) 185 NM_029790 76894 Mm.330451 NM_029790 ENSMUSG00000057234 Mettl15 0610027B03Rik|AI303697|AW049952|Mett5d1 methyltransferase like 15 protein-coding common_peak1_19_91_0.167572271573763_6.60734809184389_0.46231439386471-2 chr13 13564985 13565465 + 0.46231439386471 NA Intergenic RLTR14|LTR|ERV1 -25184 NM_010748 17101 Mm.342337 NM_010748 ENSMUSG00000019726 Lyst D13Sfk13|beige|bg lysosomal trafficking regulator protein-coding common_peak1_19_91_0.167572271573763_6.60734809184389_0.46231439386471-3 chr13 51766304 51766699 + 0.46231439386471 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 27246 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_96_750_-0.0673307341508629_9.51900373043884_0.462238784216452-2 chrX 103493041 103494381 + 0.462238784216452 NA intron (NR_015508, intron 1 of 2) CpG 153 NR_015508 70252 Mm.380486 NR_015508 ENSMUSG00000097571 Jpx 2010000I03Rik|2510040I06Rik|Enox Jpx transcript, Xist activator (non-protein coding) ncRNA common_peak1_96_750_-0.0673307341508629_9.51900373043884_0.462238784216452 chr13 53064252 53065330 + 0.462238784216452 NA Intergenic Intergenic -83752 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_363_3557_0.0287188698255996_11.81121023018_0.462042594160079 chr1 134077312 134080793 + 0.462042594160079 NA exon (NM_007570, exon 1 of 2) exon (NM_007570, exon 1 of 2) 103 NM_007570 12227 Mm.392646 NM_007570 ENSMUSG00000020423 Btg2 AA959598|APRO1|Pc3|TIS21 B cell translocation gene 2, anti-proliferative protein-coding unique_peak2_38_253_-0.115741237164305_7.93081406819001_0.462036263951347 chrX 102504415 102505570 + 0.462036263951347 NA exon (NM_027382, exon 1 of 11) exon (NM_027382, exon 1 of 11) 166 NM_001313742 70315 Mm.328128 NM_027382 ENSMUSG00000067567 Hdac8 2610007D20Rik histone deacetylase 8 protein-coding common_peak2_82_622_-0.0735824838556542_9.24629711109618_0.462028687958518 chr6 67036274 67037871 + 0.462028687958518 NA exon (NM_007836, exon 2 of 4) exon (NM_007836, exon 2 of 4) 335 NM_007836 13197 Mm.72235 NM_007836 ENSMUSG00000036390 Gadd45a AA545191|Ddit1|GADD45 growth arrest and DNA-damage-inducible 45 alpha protein-coding common_peak1_45_308_-0.106389912624509_8.21826807159212_0.462007852038385-2 chr9 64813064 64813896 + 0.462007852038385 NA intron (NM_001162917, intron 2 of 34) intron (NM_001162917, intron 2 of 34) 2469 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak1_45_308_-0.106389912624509_8.21826807159212_0.462007852038385 chr1 43533972 43534966 + 0.462007852038385 NA intron (NM_010879, intron 3 of 4) ORR1F|LTR|ERVL-MaLR 88718 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak2_127_1046_-0.0559555302465728_10.0040679618075_0.461916903178584 chr1 153751045 153753080 + 0.461916903178584 NA intron (NM_011882, intron 2 of 8) intron (NM_011882, intron 2 of 8) 2636 NM_011882 24014 Mm.259254 NM_011882 ENSMUSG00000066800 Rnasel E230029I04Rik ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) protein-coding common_peak1_115_857_0.057054099385736_9.77336088719241_0.461854382268772-2 chr9 57261196 57262831 + 0.461854382268772 NA intron (NM_028820, intron 1 of 2) CpG 586 NM_028820 74211 Mm.428905 NM_028820 ENSMUSG00000032300 1700017B05Rik AA682102|D9Ertd278e RIKEN cDNA 1700017B05 gene protein-coding common_peak1_115_857_0.057054099385736_9.77336088719241_0.461854382268772 chr1 36571755 36572853 + 0.461854382268772 NA intron (NM_027957, intron 3 of 5) intron (NM_027957, intron 3 of 5) -13923 NM_001126047 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding common_peak1_324_3090_0.0311621683529921_11.6094390230347_0.461738808968051 chr1 93477742 93480411 + 0.461738808968051 NA promoter-TSS (NM_010891) promoter-TSS (NM_010891) 15 NM_001159719 18000 Mm.428652 NM_010891 ENSMUSG00000026276 Sept2 AW208991|Nedd-5|Nedd5|mKIAA0158 septin 2 protein-coding common_peak1_95_676_0.0639880668898112_9.4350060570199_0.461708168413971-2 chr6 125038952 125040465 + 0.461708168413971 NA promoter-TSS (NM_133345) promoter-TSS (NM_133345) -140 NM_133345 28019 Mm.262547 NM_133345 ENSMUSG00000030330 Ing4 D6Wsu147e|D6Xrf92|p29ING4 inhibitor of growth family, member 4 protein-coding common_peak1_95_676_0.0639880668898112_9.4350060570199_0.461708168413971 chr16 58727873 58728834 + 0.461708168413971 NA intron (NR_045517, intron 1 of 4) intron (NR_045517, intron 1 of 4) 443 NM_001252451 224250 Mm.29482 NM_171826 ENSMUSG00000022744 Cldnd1 1110019C08Rik|AA407103|AI849195|AW489850|Cldn25 claudin domain containing 1 protein-coding common_peak2_81_554_0.0717116150143138_9.15219976874463_0.461663799711506-2 chr7 125706825 125708550 + 0.461663799711506 NA promoter-TSS (NM_001081022) promoter-TSS (NM_001081022) 1 NM_207239 233863 Mm.294173 NM_207239 ENSMUSG00000032777 Gtf3c1 - general transcription factor III C 1 protein-coding common_peak2_81_554_0.0717116150143138_9.15219976874463_0.461663799711506 chr1 37495481 37496938 + 0.461663799711506 NA intron (NM_001290801, intron 2 of 14) intron (NM_001290801, intron 2 of 14) -7604 NR_024017 77633 Mm.483177 NR_024017 ENSMUSG00000103948 4930594C11Rik - G1 to S phase transition pseudogene pseudo common_peak1_408_4266_-0.0271666688911694_12.0454230607555_0.461355993503949 chr13 45389651 45392805 + 0.461355993503949 NA exon (NM_153789, exon 2 of 7) exon (NM_153789, exon 2 of 7) 1486 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak2_230_2023_0.0378624822320397_11.0019248158103_0.461208024580021 chr11 70810974 70814203 + 0.461208024580021 NA promoter-TSS (NM_001045526) promoter-TSS (NM_001045526) -27 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak1_166_1351_0.045867169405776_10.4238130209851_0.461111113950765 chr12 84218067 84219322 + 0.461111113950765 NA intron (NM_001163501, intron 1 of 12) CpG 187 NM_001163501 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_150_1276_-0.0500224247171719_10.2935315973441_0.461063836215443 chr8 121949109 121951740 + 0.461063836215443 NA promoter-TSS (NM_001285983) promoter-TSS (NM_001285983) -68 NM_016812 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding common_peak1_743_8610_0.0186885814926292_13.0813093637003_0.461000731332567 chr9 56416904 56422995 + 0.461000731332567 NA intron (NM_025812, intron 1 of 9) intron (NM_025812, intron 1 of 9) 1103 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak2_48_289_0.09696714689575_8.22839266346281_0.460932432458251 chr1 170254998 170256167 + 0.460932432458251 NA Intergenic CpG -21742 NM_012009 26904 Mm.57009 NM_012009 ENSMUSG00000102418 Sh2d1b1 EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b SH2 domain containing 1B1 protein-coding common_peak1_14_63_0.182044121411348_6.09102206070567_0.460841271984764-2 chr15 83510569 83510917 + 0.460841271984764 NA 5' UTR (NM_178869, exon 1 of 12) 5' UTR (NM_178869, exon 1 of 12) 164 NM_178869 319953 Mm.235007 NM_178869 ENSMUSG00000022442 Ttll1 6330444E16Rik|AV014541 tubulin tyrosine ligase-like 1 protein-coding common_peak1_14_63_0.182044121411348_6.09102206070567_0.460841271984764-4 chr7 63858737 63859132 + 0.460841271984764 NA Intergenic Intergenic -57923 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak1_14_63_0.182044121411348_6.09102206070567_0.460841271984764 chr12 57211852 57212195 + 0.460841271984764 NA Intergenic Intergenic -14551 NM_172577 217593 Mm.32835 NM_172577 ENSMUSG00000035472 Slc25a21 9930033G19Rik|A630030I10|BB158148 solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 protein-coding common_peak1_14_63_0.182044121411348_6.09102206070567_0.460841271984764-3 chr7 28813008 28813357 + 0.460841271984764 NA intron (NM_177301, intron 1 of 12) intron (NM_177301, intron 1 of 12) 2292 NM_177301 15388 Mm.9043 NM_177301 ENSMUSG00000015165 Hnrnpl C79783|D830027H13Rik|Hnrpl heterogeneous nuclear ribonucleoprotein L protein-coding common_peak1_14_63_0.182044121411348_6.09102206070567_0.460841271984764-5 chrX 94367281 94367581 + 0.460841271984764 NA 5' UTR (NM_001199337, exon 1 of 9) 5' UTR (NM_001199337, exon 1 of 9) 277 NM_001199338 68316 Mm.379156 NM_026673 ENSMUSG00000079508 Apoo 0610008C08Rik|1110019O03Rik apolipoprotein O protein-coding unique_peak2_14_63_0.182044121411348_6.09102206070567_0.460841271984764-2 chr16 25058820 25059436 + 0.460841271984764 NA promoter-TSS (NR_040374) promoter-TSS (NR_040374) -511 NR_040374 319487 Mm.137341 NR_040374 ENSMUSG00000096960 A230028O05Rik - RIKEN cDNA A230028O05 gene ncRNA unique_peak2_14_63_0.182044121411348_6.09102206070567_0.460841271984764 chr11 86599527 86600144 + 0.460841271984764 NA intron (NM_029478, intron 10 of 11) intron (NM_029478, intron 10 of 11) -15677 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_78_586_-0.0751176019967357_9.15965789211169_0.460820396155842 chr5 36465094 36465715 + 0.460820396155842 NA promoter-TSS (NR_126490) promoter-TSS (NR_126490) 219 NM_024478 17713 Mm.21535 NM_024478 ENSMUSG00000029198 Grpel1 AA408748|mt-GrpE#1|mt-Grpel1 GrpE-like 1, mitochondrial protein-coding common_peak1_49_340_-0.101000425701432_8.36312771617346_0.460785093997464 chr7 27574038 27574944 + 0.460785093997464 NA intron (NM_175107, intron 7 of 9) intron (NM_175107, intron 7 of 9) 14015 NM_001122767 66367 Mm.29831 NM_175107 ENSMUSG00000049643 2310022A10Rik - RIKEN cDNA 2310022A10 gene protein-coding common_peak1_174_1525_-0.0459879454326764_10.5525452741182_0.460769536254381 chr8 90886509 90888061 + 0.460769536254381 NA intron (NM_177224, intron 2 of 39) RLTR4_MM-int|LTR|ERV1 -44964 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding common_peak2_174_1525_-0.0459879454326764_10.5525452741182_0.460769536254381 chr6 148211071 148213030 + 0.460769536254381 NA promoter-TSS (NR_015615) promoter-TSS (NR_015615) -238 NR_015615 320737 Mm.137858 NR_015615 4732416N19Rik - RIKEN cDNA 4732416N19 gene ncRNA common_peak2_34_188_0.119203290302461_7.6218440693723_0.460763172067378-2 chr19 56721205 56722011 + 0.460763172067378 NA promoter-TSS (NM_007419) promoter-TSS (NM_007419) -764 NM_007419 11554 Mm.46797 NM_007419 ENSMUSG00000035283 Adrb1 Adrb-1|beta-AR adrenergic receptor, beta 1 protein-coding common_peak2_34_188_0.119203290302461_7.6218440693723_0.460763172067378 chr16 91433043 91434329 + 0.460763172067378 NA Intergenic Intergenic 27451 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding common_peak2_53_372_-0.0942119422292862_8.49592584914059_0.460378651505654 chr11 87700909 87702984 + 0.460378651505654 NA intron (NR_045139, intron 1 of 1) intron (NR_045139, intron 1 of 1) 2422 NR_045139 68690 Mm.342009 NR_045139 1110028F11Rik - RIKEN cDNA 1110028F11 gene ncRNA common_peak2_52_319_0.0938136705557504_8.36883493016524_0.4603008079407 chr14 26515434 26516845 + 0.4603008079407 NA intron (NM_001310445, intron 1 of 22) intron (NM_001310445, intron 1 of 22) 18485 NM_032008 83997 Mm.36769 NM_032008 ENSMUSG00000021870 Slmap D330001L02Rik|Miranda|Slap|mKIAA1601 sarcolemma associated protein protein-coding common_peak1_238_2110_0.0373936507454218_11.0624076887199_0.460289400505778 chr8 111258258 111259840 + 0.460289400505778 NA exon (NM_009149, exon 1 of 26) exon (NM_009149, exon 1 of 26) 153 NM_009149 20340 Mm.276271 NM_009149 ENSMUSG00000003316 Glg1 AI593353|AW537898|CFR|CFR-1|ESL-1|MG-160|MG160|Selel golgi apparatus protein 1 protein-coding common_peak2_35_230_-0.120451368357034_7.79152335723754_0.460249827786832 chr4 88778818 88779798 + 0.460249827786832 NA promoter-TSS (NM_001161608) promoter-TSS (NM_001161608) -542 NM_001161608 545648 Mm.368246 NM_001161608 ENSMUSG00000096591 Gm13272 OTTMUSG00000011265 predicted gene 13272 protein-coding common_peak2_35_230_-0.120451368357034_7.79152335723754_0.460249827786832-2 chr5 143180004 143181057 + 0.460249827786832 NA promoter-TSS (NM_177880) promoter-TSS (NM_177880) 245 NM_021326 57782 Mm.320419 NM_021326 ENSMUSG00000061898 Rbak - RB-associated KRAB zinc finger protein-coding common_peak2_61_439_-0.0880651976039974_8.73732711472266_0.460158321486185 chr8 84839883 84841660 + 0.460158321486185 NA promoter-TSS (NM_001297607) promoter-TSS (NM_001297607) -106 NM_009010 19358 Mm.255539 NM_009010 ENSMUSG00000003813 Rad23a 2310040P19Rik|AL024030|HR23A|mHR23A RAD23 homolog A, nucleotide excision repair protein protein-coding common_peak1_61_439_-0.0880651976039974_8.73732711472266_0.460158321486185 chr9 4308926 4309599 + 0.460158321486185 NA promoter-TSS (NM_001164574) promoter-TSS (NM_001164574) 232 NM_026276 67618 Mm.33970 NM_026276 ENSMUSG00000025894 Aasdhppt 2010309J24Rik|2810407B07Rik|AASD-PPT|CGI-80|LYS2|LYS5 aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase protein-coding common_peak2_77_521_0.0716497642243326_9.06373087868205_0.460154175102136 chr18 56572244 56573991 + 0.460154175102136 NA promoter-TSS (NM_001127338) promoter-TSS (NM_001127338) -178 NM_001127338 110695 Mm.30250 NM_138600 ENSMUSG00000053644 Aldh7a1 Atq1|D18Wsu181e aldehyde dehydrogenase family 7, member A1 protein-coding common_peak2_361_3678_-0.0292783343102574_11.8304587938178_0.459920154146645 chr16 10781310 10786696 + 0.459920154146645 NA 3' UTR (NM_009896, exon 2 of 2) 3' UTR (NM_009896, exon 2 of 2) 1533 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding common_peak2_106_774_0.0609179191941731_9.62851145975869_0.459716176764507 chr6 149140805 149142932 + 0.459716176764507 NA intron (NM_001252097, intron 1 of 2) B1F|SINE|Alu 355 NM_177101 320204 Mm.274099 NM_177101 ENSMUSG00000039958 Etfbkmt 4833442J19Rik|AI256744|ETFB-KMT|Mettl20 electron transfer flavoprotein beta subunit lysine methyltransferase protein-coding common_peak1_169_1472_-0.0462875559970009_10.5013979370373_0.459588607977124-2 chr5 65862997 65865286 + 0.459588607977124 NA intron (NM_001081105, intron 1 of 2) ID_B1|SINE|B4 572 NM_001081105 74734 Mm.20323 NM_001081105 ENSMUSG00000029204 Rhoh 5830400A04Rik|AU019774|Arhh ras homolog family member H protein-coding common_peak1_169_1472_-0.0462875559970009_10.5013979370373_0.459588607977124 chr16 91372305 91373500 + 0.459588607977124 NA 5' UTR (NM_001110498, exon 1 of 7) 5' UTR (NM_001110498, exon 1 of 7) 119 NM_001110498 15976 Mm.6834 NM_010509 ENSMUSG00000022971 Ifnar2 AI747302|Ifnar-2 interferon (alpha and beta) receptor 2 protein-coding common_peak1_42_284_-0.109090938798154_8.10027263965303_0.459566837085394 chr10 81167213 81167764 + 0.459566837085394 NA intron (NM_021501, intron 1 of 10) intron (NM_021501, intron 1 of 10) 232 NM_021501 59004 Mm.34428 NM_021501 ENSMUSG00000004934 Pias4 PIASY|Pias-gamma|Piasg protein inhibitor of activated STAT 4 protein-coding common_peak2_42_284_-0.109090938798154_8.10027263965303_0.459566837085394 chr14 73114875 73116137 + 0.459566837085394 NA Intergenic Intergenic -27004 NM_001170694 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak1_42_284_-0.109090938798154_8.10027263965303_0.459566837085394-2 chr5 111176171 111176903 + 0.459566837085394 NA intron (NM_001267622, intron 5 of 22) intron (NM_001267622, intron 5 of 22) -154160 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding common_peak2_157_1348_-0.0489632306485959_10.373193017624_0.45955803024123 chr4 83485231 83487263 + 0.45955803024123 NA intron (NM_001290527, intron 1 of 10) CpG-10005 201 NM_001290527 101739 Mm.105331 NM_133948 ENSMUSG00000028484 Psip1 AA408851|AU015605|Dfs70|Ledgfa|Ledgfb|Psip2 PC4 and SFRS1 interacting protein 1 protein-coding common_peak1_227_2100_-0.039137104750159_11.017291894298_0.459507602586036 chr6 87849893 87851726 + 0.459507602586036 NA intron (NM_001109745, intron 1 of 4) CpG 297 NM_001109746 12785 Mm.290251 NM_013493 ENSMUSG00000030057 Cnbp AA408710|Cnbp1|Znf9 cellular nucleic acid binding protein protein-coding common_peak2_186_1555_0.0432913291158314_10.6252720095441_0.459461442406673 chr2 31114481 31120193 + 0.459461442406673 NA intron (NM_001177648, intron 1 of 16) B4A|SINE|B4 -20837 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_41_238_0.103220147004106_7.9524768814828_0.459432852810787 chr8 22165721 22166607 + 0.459432852810787 NA intron (NM_011848, intron 1 of 15) CpG 271 NM_011848 23954 Mm.41413 NM_011848 ENSMUSG00000031478 Nek3 - NIMA (never in mitosis gene a)-related expressed kinase 3 protein-coding common_peak2_41_238_0.103220147004106_7.9524768814828_0.459432852810787 chr9 90125756 90127232 + 0.459432852810787 NA Intergenic Intergenic -11674 NM_024431 21761 Mm.426209 NM_024431 ENSMUSG00000062270 Morf4l1 MORFRG15|MRG15|TEG-189|Tex189|mKIAA4002 mortality factor 4 like 1 protein-coding common_peak1_82_563_0.0699545167695543_9.17452861078357_0.459159885310136 chr2 92374775 92376036 + 0.459159885310136 NA 5' UTR (NM_145122, exon 1 of 11) 5' UTR (NM_145122, exon 1 of 11) 166 NM_145122 18633 Mm.202782 NM_145122 ENSMUSG00000027222 Pex16 - peroxisomal biogenesis factor 16 protein-coding common_peak1_140_1175_-0.0524067412570606_10.1734689742078_0.459126009659624 chr4 155992818 155993915 + 0.459126009659624 NA promoter-TSS (NM_080445) promoter-TSS (NM_080445) 29 NM_001302468 20318 Mm.293517 NM_011341 ENSMUSG00000029076 Sdf4 Cab45 stromal cell derived factor 4 protein-coding common_peak2_122_922_0.0553909435729363_9.87788230943224_0.459080897463138 chr7 101347003 101349154 + 0.459080897463138 NA promoter-TSS (NM_001040111) promoter-TSS (NM_001040111) 9 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak2_150_1191_0.0493518645233895_10.2438444527239_0.459060895621968 chr10 115361589 115363542 + 0.459060895621968 NA promoter-TSS (NM_133683) promoter-TSS (NM_133683) -303 NM_133683 67226 Mm.29647 NM_133683 ENSMUSG00000069520 Tmem19 2810428F02Rik|AW125171 transmembrane protein 19 protein-coding common_peak1_88_676_-0.0699936548108084_9.36801519616959_0.459014595286109 chr17 35172803 35174080 + 0.459014595286109 NA intron (NM_019467, intron 1 of 7) intron (NM_019467, intron 1 of 7) 2560 NM_019467 11629 Mm.10747 NM_019467 ENSMUSG00000024397 Aif1 AI607846|AIF-1|D17H6S50E|G1|Iba1 allograft inflammatory factor 1 protein-coding common_peak2_566_6156_0.0218663390432603_12.5989450227367_0.458987036034838 chr7 73536488 73542578 + 0.458987036034838 NA TTS (NR_037569) TTS (NR_037569) 2213 NM_001081345 244059 Mm.34539 NM_001081345 ENSMUSG00000078671 Chd2 2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2 chromodomain helicase DNA binding protein 2 protein-coding common_peak1_129_1066_-0.0558176293051726_10.0314356461718_0.458841782039887 chr2 29636600 29638490 + 0.458841782039887 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 17825 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding unique_peak2_20_123_-0.176721666588377_6.86583547709269_0.458613460759951-2 chr8 46747227 46748278 + 0.458613460759951 NA intron (NM_008391, intron 1 of 8) intron (NM_008391, intron 1 of 8) 8007 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_22_110_0.144044937743404_6.86643833522181_0.458613460759951-2 chr19 41330621 41331153 + 0.458613460759951 NA intron (NM_031376, intron 3 of 16) intron (NM_031376, intron 3 of 16) 54183 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding unique_peak2_20_123_-0.176721666588377_6.86583547709269_0.458613460759951 chr1 173533943 173534941 + 0.458613460759951 NA intron (NM_001024721, intron 1 of 4) Lx2|LINE|L1 1515 NM_001024721 545384 Mm.371698 NM_001024721 ENSMUSG00000070501 Ifi214 Pyhin-B|p214 interferon activated gene 214 protein-coding unique_peak2_22_110_0.144044937743404_6.86643833522181_0.458613460759951 chr1 39948744 39949510 + 0.458613460759951 NA intron (NM_001252200, intron 2 of 31) intron (NM_001252200, intron 2 of 31) 48214 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding common_peak1_22_110_0.144044937743404_6.86643833522181_0.458613460759951-3 chr6 129218271 129218882 + 0.458613460759951 NA Intergenic RMER13B|LTR|ERVK 19469 NR_040265 76432 Mm.261738 NR_040265 ENSMUSG00000097354 2310001H17Rik AI646108 RIKEN cDNA 2310001H17 gene ncRNA common_peak1_22_110_0.144044937743404_6.86643833522181_0.458613460759951 chr11 76945327 76945763 + 0.458613460759951 NA promoter-TSS (NM_178645) promoter-TSS (NM_178645) -111 NM_178645 104184 Mm.399785 NM_178645 ENSMUSG00000020840 Blmh AI035728|Bh|Bmh bleomycin hydrolase protein-coding common_peak1_20_123_-0.176721666588377_6.86583547709269_0.458613460759951-2 chr9 94607843 94608348 + 0.458613460759951 NA Intergenic Intergenic -61797 NM_177909 331004 Mm.326125 NM_177909 ENSMUSG00000031129 Slc9a9 5730527A11Rik|9930105B05|AI854429|Nhe9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 protein-coding common_peak1_20_123_-0.176721666588377_6.86583547709269_0.458613460759951 chr10 82047722 82048112 + 0.458613460759951 NA promoter-TSS (NM_001024626) promoter-TSS (NM_001024626) -210 NM_001024626 408062 Mm.391409 NM_001024626 ENSMUSG00000061371 Zfp873 - zinc finger protein 873 protein-coding common_peak2_187_1566_0.0425662453261513_10.6350725871357_0.458365292250095 chrX 140504070 140507935 + 0.458365292250095 NA Intergenic Intergenic 36666 NR_122039 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding unique_peak2_32_208_-0.130039184420003_7.64233953987088_0.458359703150319 chr1 181876379 181877744 + 0.458359703150319 NA Intergenic RMER1B|Other|Other -34660 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_32_208_-0.130039184420003_7.64233953987088_0.458359703150319-3 chr6 39810429 39810911 + 0.458359703150319 NA intron (NM_010270, intron 1 of 2) intron (NM_010270, intron 1 of 2) 266 NM_010270 14548 Mm.377071 NM_010270 ENSMUSG00000029918 Mrps33 AI841153|CGI-139|Gdap3|MRP-S33|PTD003 mitochondrial ribosomal protein S33 protein-coding common_peak1_32_208_-0.130039184420003_7.64233953987088_0.458359703150319-4 chr6 108476468 108477104 + 0.458359703150319 NA intron (NM_010585, intron 46 of 61) intron (NM_010585, intron 46 of 61) -12957 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak1_32_208_-0.130039184420003_7.64233953987088_0.458359703150319-2 chr2 24366864 24367471 + 0.458359703150319 NA Intergenic Intergenic -18230 NM_177611 215632 Mm.490434 NM_177611 ENSMUSG00000026979 Psd4 BC046518|EFA6B pleckstrin and Sec7 domain containing 4 protein-coding common_peak1_32_208_-0.130039184420003_7.64233953987088_0.458359703150319 chr11 120850250 120850961 + 0.458359703150319 NA intron (NM_027745, intron 18 of 18) B1_Mus1|SINE|Alu -26058 NM_007988 14104 Mm.236443 NM_007988 ENSMUSG00000025153 Fasn A630082H08Rik|FAS fatty acid synthase protein-coding common_peak1_69_454_0.0783352906238317_8.86889038039797_0.458214684322183 chr4 83417682 83418532 + 0.458214684322183 NA intron (NM_029949, intron 1 of 8) CpG 363 NM_029949 77634 Mm.271985 NM_029949 ENSMUSG00000028483 Snapc3 1810020H02Rik|4930558A07Rik|5031401C21Rik|AI414457|E030018J20Rik small nuclear RNA activating complex, polypeptide 3 protein-coding common_peak2_28_148_0.129494794050407_7.28391591748736_0.458191056114509 chr8 67494675 67495393 + 0.458191056114509 NA promoter-TSS (NM_010874) promoter-TSS (NM_010874) 86 NM_010874 17961 Mm.4695 NM_010874 ENSMUSG00000051147 Nat2 AV377607 N-acetyltransferase 2 (arylamine N-acetyltransferase) protein-coding common_peak1_322_3068_0.0305435155248333_11.5988246882289_0.458178620429337 chr19 10980067 10983973 + 0.458178620429337 NA intron (NM_001034898, intron 3 of 6) B4|SINE|B4 -7350 NM_023529 69826 Mm.273404 NM_023529 ENSMUSG00000024731 Ms4a10 2010001N17Rik membrane-spanning 4-domains, subfamily A, member 10 protein-coding common_peak2_112_829_0.0585519719381136_9.72624351220334_0.458161904296602 chr6 130029644 130033071 + 0.458161904296602 NA intron (NM_013793, intron 6 of 7) intron (NM_013793, intron 6 of 7) -4397 NM_053154 93971 Mm.14112 NM_053154 Klra19 Ly49s killer cell lectin-like receptor, subfamily A, member 19 protein-coding common_peak2_145_1143_0.0490600007935971_10.1844013371752_0.457902965425689 chr5 30906688 30908460 + 0.457902965425689 NA TTS (NM_001048192) TTS (NM_001048192) 214 NM_001134692 67695 Mm.21450 NM_024460 ENSMUSG00000038803 Ost4 2310016E02Rik oligosaccharyltransferase complex subunit 4 (non-catalytic) protein-coding common_peak2_307_2892_0.0315955552161782_11.5141483855377_0.457888600200106 chr12 8498061 8501753 + 0.457888600200106 NA promoter-TSS (NM_007483) promoter-TSS (NM_007483) 78 NM_007483 11852 Mm.687 NM_007483 ENSMUSG00000054364 Rhob AA017882|Arh6|Arhb ras homolog family member B protein-coding common_peak2_66_481_-0.0823456360802375_8.87171651818984_0.457878733083416 chr12 76254441 76256169 + 0.457878733083416 NA promoter-TSS (NM_138745) promoter-TSS (NM_138745) 73 NM_138745 108156 Mm.29584 NM_138745 ENSMUSG00000021048 Mthfd1 Dcs|E430024A07Rik|Mthfd methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase protein-coding common_peak1_248_2221_0.0359972839325398_11.1356417433554_0.457849346930405 chr17 35257485 35260113 + 0.457849346930405 NA Intergenic B2_Mm2|SINE|B2 -4295 NM_010380 14964 Mm.439675 NM_010380 ENSMUSG00000073411 H2-D1 H-2D|H2-D histocompatibility 2, D region locus 1 protein-coding common_peak1_78_529_0.0722505416627541_9.08597382028194_0.457809280556422 chr7 66300614 66301715 + 0.457809280556422 NA intron (NM_146191, intron 11 of 33) intron (NM_146191, intron 11 of 33) 80560 NR_106024 102465640 NR_106024 ENSMUSG00000098353 Mir7057 Gm27550|mmu-mir-7057 microRNA 7057 ncRNA common_peak2_78_529_0.0722505416627541_9.08597382028194_0.457809280556422 chr5 122316643 122318791 + 0.457809280556422 NA intron (NM_177242, intron 4 of 5) MIRb|SINE|MIR 33319 NM_177242 320717 Mm.489670 NM_177242 ENSMUSG00000038582 Pptc7 9130017A15Rik|AA672638|AI848390|TA-PP2C PTC7 protein phosphatase homolog protein-coding common_peak2_46_316_-0.10520794271339_8.25573505878271_0.457790709129431 chr14 40967053 40968068 + 0.457790709129431 NA promoter-TSS (NM_145928) promoter-TSS (NM_145928) -664 NM_145928 52588 Mm.28876 NM_145928 ENSMUSG00000037824 Tspan14 AA958793|D14Ertd226e|Tm4sf14|tspan-14 tetraspanin 14 protein-coding common_peak1_46_316_-0.10520794271339_8.25573505878271_0.457790709129431 chr4 88034688 88035299 + 0.457790709129431 NA Intergenic Intergenic -1586 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding unique_peak2_46_316_-0.10520794271339_8.25573505878271_0.457790709129431 chr19 18597892 18599595 + 0.457790709129431 NA intron (NM_017375, intron 2 of 9) intron (NM_017375, intron 2 of 9) 33070 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak2_107_784_0.0588833454333173_9.64599051649565_0.457734776457769 chr6 13870816 13872144 + 0.457734776457769 NA promoter-TSS (NR_045995) promoter-TSS (NR_045995) 3 NR_024619 66520 Mm.29615 NM_183258 2610001J05Rik C79299 RIKEN cDNA 2610001J05 gene ncRNA unique_peak2_25_129_0.133053431612478_7.08889452883469_0.457572905071735-3 chrX 102119430 102120033 + 0.457572905071735 NA intron (NM_027181, intron 1 of 3) intron (NM_027181, intron 1 of 3) 266 NM_027181 69713 Mm.371635 NM_027181 ENSMUSG00000079480 Pin4 2410002I22Rik|EPVH|Par14 protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) protein-coding common_peak1_23_143_-0.156149533350217_7.0918502347672_0.457572905071735 chr12 87388468 87389103 + 0.457572905071735 NA promoter-TSS (NM_011479) promoter-TSS (NM_011479) -430 NM_011479 20773 Mm.565 NM_011479 ENSMUSG00000021036 Sptlc2 LCB2|LCB2a|Spt2 serine palmitoyltransferase, long chain base subunit 2 protein-coding unique_peak2_25_129_0.133053431612478_7.08889452883469_0.457572905071735 chr11 4249305 4250371 + 0.457572905071735 NA Intergenic B1_Mus1|SINE|Alu -7730 NM_008501 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding unique_peak2_25_129_0.133053431612478_7.08889452883469_0.457572905071735-2 chr2 76647535 76648409 + 0.457572905071735 NA promoter-TSS (NM_011871) promoter-TSS (NM_011871) 22 NM_011871 23992 Mm.277250 NM_011871 ENSMUSG00000002731 Prkra AV120107|PRK|Pact|RAX|lear protein kinase, interferon inducible double stranded RNA dependent activator protein-coding common_peak1_25_129_0.133053431612478_7.08889452883469_0.457572905071735 chr1 184732127 184732546 + 0.457572905071735 NA 5' UTR (NM_008250, exon 1 of 4) 5' UTR (NM_008250, exon 1 of 4) 157 NM_008250 15284 Mm.1347 NM_008250 ENSMUSG00000039377 Hlx Hlx1 H2.0-like homeobox protein-coding unique_peak2_23_143_-0.156149533350217_7.0918502347672_0.457572905071735 chr2 43727171 43728177 + 0.457572905071735 NA Intergenic Intergenic -21150 NM_001301832 76117 Mm.217350 NM_153820 ENSMUSG00000049744 Arhgap15 5830480G12Rik Rho GTPase activating protein 15 protein-coding unique_peak2_23_143_-0.156149533350217_7.0918502347672_0.457572905071735-2 chr7 112225792 112226696 + 0.457572905071735 NA intron (NM_001193305, intron 1 of 25) CpG 408 NM_001193305 320878 Mm.52312 NM_177282 ENSMUSG00000038244 Mical2 5330438E18Rik|9530064J02|MICAL-2|mKIAA0750 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding common_peak2_25_129_0.133053431612478_7.08889452883469_0.457572905071735 chr14 56571979 56572569 + 0.457572905071735 NA promoter-TSS (NM_001014996) promoter-TSS (NM_001014996) -428 NM_001014996 219103 Mm.212525 NM_001014996 ENSMUSG00000064128 Cenpj 4932437H03Rik|CPAP|Gm81|LAP|LIP1|Sas4 centromere protein J protein-coding common_peak1_25_129_0.133053431612478_7.08889452883469_0.457572905071735-2 chr8 19161789 19162206 + 0.457572905071735 NA Intergenic Intergenic 4110 NM_153115 78128 Mm.229357 NM_153115 ENSMUSG00000079842 Spag11a 9230111C08Rik|Bin1b|EP2Q|EP2e|Spag11 sperm associated antigen 11A protein-coding common_peak1_23_143_-0.156149533350217_7.0918502347672_0.457572905071735-2 chr9 124106302 124106856 + 0.457572905071735 NA exon (NM_009915, exon 3 of 3) exon (NM_009915, exon 3 of 3) 4396 NM_009915 12772 Mm.6272 NM_009915 ENSMUSG00000049103 Ccr2 Cc-ckr-2|Ccr2a|Ccr2b|Ckr2|Ckr2a|Ckr2b|Cmkbr2|mJe-r chemokine (C-C motif) receptor 2 protein-coding common_peak1_123_932_0.0541735562552592_9.89282004897939_0.457417867787028 chr14 79426077 79427586 + 0.457417867787028 NA exon (NM_001024135, exon 1 of 1) exon (NM_001024135, exon 1 of 1) 320 NM_001024135 211255 Mm.284526 NM_001024135 ENSMUSG00000043881 Kbtbd7 1110008P08Rik|AU045792|Gm295 kelch repeat and BTB (POZ) domain containing 7 protein-coding common_peak2_38_216_0.111392217163381_7.81724734102617_0.457417728125404 chr4 128609478 128610893 + 0.457417728125404 NA promoter-TSS (NM_177758) promoter-TSS (NM_177758) -87 NM_177758 269585 Mm.153291 NM_177758 ENSMUSG00000061894 Zscan20 C130001F22|Zfp31|Zkscan20 zinc finger and SCAN domains 20 protein-coding common_peak1_75_559_-0.0756941911753639_9.09143592135728_0.457233816894148 chr1 74389562 74390834 + 0.457233816894148 NA Intergenic Intergenic -1411 NM_153088 227292 Mm.165042 NM_153088 ENSMUSG00000026176 Ctdsp1 GIP|NLIIF|Nif3|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding common_peak2_75_559_-0.0756941911753639_9.09143592135728_0.457233816894148 chr6 29211286 29213295 + 0.457233816894148 NA promoter-TSS (NM_011829) promoter-TSS (NM_011829) 7 NM_011829 23917 Mm.260707 NM_011829 ENSMUSG00000003500 Impdh1 B930086D20Rik|IMPDH-I inosine 5'-phosphate dehydrogenase 1 protein-coding common_peak2_29_186_-0.138238027289933_7.47777544624267_0.457233432536858-2 chr9 21240945 21242661 + 0.457233432536858 NA Intergenic ID_B1|SINE|B4 -2471 NM_001110307 50868 Mm.248266 NM_016679 ENSMUSG00000003308 Keap1 INRF2|mKIAA0132 kelch-like ECH-associated protein 1 protein-coding common_peak1_29_186_-0.138238027289933_7.47777544624267_0.457233432536858 chr3 84680925 84681797 + 0.457233432536858 NA intron (NM_177260, intron 1 of 6) intron (NM_177260, intron 1 of 6) 15169 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding unique_peak2_29_186_-0.138238027289933_7.47777544624267_0.457233432536858 chr8 122912335 122913754 + 0.457233432536858 NA intron (NR_037865, intron 3 of 13) intron (NR_037865, intron 3 of 13) 64670 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding common_peak2_29_186_-0.138238027289933_7.47777544624267_0.457233432536858 chr12 17032427 17033736 + 0.457233432536858 NA Intergenic Intergenic -21354 NM_001201333 73667 Mm.159048 NM_001201332 ENSMUSG00000071398 2410004P03Rik - RIKEN cDNA 2410004P03 gene protein-coding common_peak1_62_447_-0.0857457621058213_8.76448204100469_0.457227639574713 chr18 65312529 65313678 + 0.457227639574713 NA intron (NM_001037294, intron 4 of 12) intron (NM_001037294, intron 4 of 12) 64242 NR_029600 387231 NR_029600 ENSMUSG00000065402 Mir122 Mir122a|Mirn122a|mir-122|mmu-mir-122 microRNA 122 ncRNA common_peak2_114_919_-0.058923659972546_9.8160282209581_0.457212874221355 chr15 76330401 76332793 + 0.457212874221355 NA TTS (NM_175399) TTS (NM_175399) 303 NM_010331 14731 Mm.5903 NM_010331 ENSMUSG00000022561 Gpaa1 C80044|mGAA1 GPI anchor attachment protein 1 protein-coding common_peak2_26_164_-0.144114647406221_7.29426489054271_0.457186059703072 chr11 116138157 116138960 + 0.457186059703072 NA exon (NM_024177, exon 2 of 9) exon (NM_024177, exon 2 of 9) 310 NM_024177 60441 Mm.29974 NM_024177 ENSMUSG00000020775 Mrpl38 1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3 mitochondrial ribosomal protein L38 protein-coding unique_peak2_26_164_-0.144114647406221_7.29426489054271_0.457186059703072 chr1 10219786 10221167 + 0.457186059703072 NA intron (NM_001102430, intron 1 of 37) Lx9|LINE|L1 12194 NM_001102430 211673 Mm.229141 NM_001102430 ENSMUSG00000067851 Arfgef1 ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) protein-coding common_peak1_140_1094_0.0505504490907676_10.1219903790339_0.456978941925088 chr8 117498072 117499628 + 0.456978941925088 NA intron (NM_172285, intron 1 of 32) CpG 559 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak2_54_380_-0.092356169107406_8.52746910293962_0.456918114338043 chr4 156021048 156023072 + 0.456918114338043 NA non-coding (NR_040563, exon 3 of 3) non-coding (NR_040563, exon 3 of 3) 1764 NR_040563 100038526 Mm.191866 NR_040563 Gm10560 ENSMUSG00000073673 predicted gene 10560 ncRNA common_peak1_54_380_-0.092356169107406_8.52746910293962_0.456918114338043 chr7 114069660 114070733 + 0.456918114338043 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 47585 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak1_39_261_-0.115676462720318_7.97558477017729_0.456912314070659 chr13 21452927 21453814 + 0.456912314070659 NA intron (NM_001013786, intron 1 of 3) intron (NM_001013786, intron 1 of 3) 357 NM_001013786 432731 Mm.390557 NM_001013786 ENSMUSG00000022228 Zscan26 BC068174|Zfp187|Znf187 zinc finger and SCAN domain containing 26 protein-coding common_peak1_39_261_-0.115676462720318_7.97558477017729_0.456912314070659-2 chr2 164544955 164545683 + 0.456912314070659 NA Intergenic Intergenic -17397 NM_026323 67701 Mm.27289 NM_026323 ENSMUSG00000017723 Wfdc2 1600023A02Rik|HE4|WAP5 WAP four-disulfide core domain 2 protein-coding common_peak1_12_52_0.200888478891378_5.82836469400889_0.456849196733765 chr11 87986292 87986648 + 0.456849196733765 NA 5' UTR (NM_001168472, exon 1 of 3) 5' UTR (NM_001168472, exon 1 of 3) 115 NM_001168472 68097 Mm.246436 NM_026556 ENSMUSG00000020483 Dynll2 1700064A15Rik|6720463E02Rik|C87222|DLC8|DLC8b|Dlc2 dynein light chain LC8-type 2 protein-coding common_peak1_12_52_0.200888478891378_5.82836469400889_0.456849196733765-2 chr2 30495989 30496298 + 0.456849196733765 NA Intergenic Intergenic -21944 NM_030244 72500 Mm.295464 NM_030244 ENSMUSG00000089762 Ier5l 2610524G09Rik immediate early response 5-like protein-coding common_peak1_15_90_-0.211541377073528_6.40202395166193_0.456612244650066 chr12 99467753 99468181 + 0.456612244650066 NA Intergenic Intergenic -17893 NM_183186 71375 Mm.341972 NM_183186 ENSMUSG00000033713 Foxn3 5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1 forkhead box N3 protein-coding common_peak1_15_90_-0.211541377073528_6.40202395166193_0.456612244650066-5 chr19 40589184 40589532 + 0.456612244650066 NA promoter-TSS (NM_019698) promoter-TSS (NM_019698) -895 NM_153554 56454 Mm.233117 NM_019698 ENSMUSG00000025007 Aldh18a1 2810433K04Rik|AI429789|Pycs aldehyde dehydrogenase 18 family, member A1 protein-coding common_peak1_15_90_-0.211541377073528_6.40202395166193_0.456612244650066-3 chr17 86323695 86324056 + 0.456612244650066 NA intron (NM_011104, intron 1 of 14) intron (NM_011104, intron 1 of 14) -36697 NR_045435 72104 Mm.443401 NR_045435 ENSMUSG00000100738 2010106C02Rik - RIKEN cDNA 2010106C02 gene ncRNA unique_peak2_15_90_-0.211541377073528_6.40202395166193_0.456612244650066 chr4 135095582 135096412 + 0.456612244650066 NA Intergenic Intergenic -24648 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak1_15_90_-0.211541377073528_6.40202395166193_0.456612244650066-4 chr18 25242540 25242959 + 0.456612244650066 NA intron (NM_001033532, intron 5 of 10) intron (NM_001033532, intron 5 of 10) 73729 NM_001033532 225289 Mm.391081 NM_001033532 ENSMUSG00000033632 AW554918 4921538P22|AI461742|Kiaa1328|mKIAA1328 expressed sequence AW554918 protein-coding unique_peak2_15_90_-0.211541377073528_6.40202395166193_0.456612244650066-2 chr5 105244175 105244926 + 0.456612244650066 NA Intergenic RodERV21-int|LTR|ERV1 -5017 NM_001039646 626578 Mm.275893 NM_001039646 ENSMUSG00000105096 Gbp10 - guanylate-binding protein 10 protein-coding unique_peak2_15_90_-0.211541377073528_6.40202395166193_0.456612244650066-3 chr5 124004677 124005493 + 0.456612244650066 NA 3' UTR (NM_177876, exon 4 of 4) 3' UTR (NM_177876, exon 4 of 4) 8233 NR_105999 102465625 NR_105999 ENSMUSG00000098454 Mir7032 Gm27309|mmu-mir-7032 microRNA 7032 ncRNA common_peak1_15_90_-0.211541377073528_6.40202395166193_0.456612244650066-2 chr13 92355226 92355535 + 0.456612244650066 NA promoter-TSS (NM_010829) promoter-TSS (NM_010829) -377 NM_010829 17686 Mm.343101 NM_010829 ENSMUSG00000014850 Msh3 D13Em1|Rep-3|Rep3 mutS homolog 3 protein-coding common_peak1_53_327_0.0912678734078671_8.40318594132202_0.456529736636816 chr6 129614475 129615546 + 0.456529736636816 NA intron (NM_001286018, intron 6 of 7) B4A|SINE|B4 7673 NM_033078 27007 Mm.8217 NM_033078 ENSMUSG00000030149 Klrk1 D6H12S2489E|NKG2-D|Nkg2d killer cell lectin-like receptor subfamily K, member 1 protein-coding common_peak1_99_777_-0.0643865304770976_9.57143307974764_0.456514480412523 chr4 137373430 137374544 + 0.456514480412523 NA Intergenic Intergenic -16228 NM_001243769 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak2_74_496_0.0730476667273798_8.99362587492598_0.456396891434823 chr7 128744185 128745652 + 0.456396891434823 NA promoter-TSS (NM_001029982) promoter-TSS (NM_001029982) 48 NM_001029982 207352 Mm.297105 NM_001029982 ENSMUSG00000055319 Sec23ip D7Ertd373e|p125 Sec23 interacting protein protein-coding common_peak2_113_839_0.0568655130704077_9.74267827420133_0.456327065892264 chr9 57588728 57590600 + 0.456327065892264 NA TTS (NM_022813) TTS (NM_022813) 212 NM_027895 71742 Mm.155877 NM_027895 ENSMUSG00000032308 Ulk3 1200015E14Rik unc-51-like kinase 3 protein-coding common_peak1_250_2244_0.0352977511854888_11.1501486052213_0.456262092735069 chr8 125053267 125055181 + 0.456262092735069 NA promoter-TSS (NM_174854) promoter-TSS (NM_174854) 29 NM_174854 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding common_peak1_108_793_0.0587470383866791_9.6623687163363_0.4559933550672 chr6 41541301 41543438 + 0.4559933550672 NA Intergenic Intergenic 20593 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak1_177_1463_0.0439308416665014_10.5376652591173_0.45564032857662 chr16 64872775 64874519 + 0.45564032857662 NA Intergenic Intergenic 21562 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak1_85_648_-0.0697351865588338_9.30720707471972_0.455414522725397 chr1 106599412 106600665 + 0.455414522725397 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -53407 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak2_79_538_0.0702173872509828_9.109250156378_0.455252543707507 chr17 71597918 71599455 + 0.455252543707507 NA promoter-TSS (NR_027953) promoter-TSS (NR_027953) 75 NR_015549 68789 Mm.75202 NR_015549 ENSMUSG00000085492 Trmt61b 1110039F03Rik|623451|Gm6431 tRNA methyltransferase 61B ncRNA common_peak1_130_998_0.0527463940544557_9.99071406481965_0.455198559544086 chr10 95323279 95324177 + 0.455198559544086 NA intron (NM_009950, intron 1 of 2) CpG 369 NM_009950 12905 Mm.473739 NM_009950 ENSMUSG00000045867 Cradd RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding common_peak2_283_2739_-0.0335760096281614_11.4031721730338_0.455153375697273 chrX 73963809 73968664 + 0.455153375697273 NA 5' UTR (NM_008224, exon 1 of 26) 5' UTR (NM_008224, exon 1 of 26) 121 NM_008224 15161 Mm.491126 NM_008224 ENSMUSG00000031386 Hcfc1 AW060991|HCF|HCF1 host cell factor C1 protein-coding common_peak2_173_1514_-0.0456919365081045_10.5422561101063_0.455121808726429 chr12 25392646 25395730 + 0.455121808726429 NA Intergenic Intergenic 265014 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_143_1205_-0.0514918964683488_10.2102682436659_0.455121484367477 chr1 52630205 52631924 + 0.455121484367477 NA intron (NR_024590, intron 1 of 8) intron (NR_024590, intron 1 of 8) 359 NM_001142647 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding common_peak2_153_1222_0.0471251634320353_10.2797712702434_0.455119278530231 chr9 32939383 32942338 + 0.455119278530231 NA Intergenic Intergenic -11894 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak1_42_245_0.103212664914711_7.9941208377966_0.455073942166226-2 chrX 129749699 129750576 + 0.455073942166226 NA intron (NM_172493, intron 1 of 26) CpG 395 NM_172493 54004 Mm.10763 NM_017398 ENSMUSG00000034480 Diaph2 Dia3|Diap2|Drf2|E430022I22Rik diaphanous related formin 2 protein-coding common_peak1_42_245_0.103212664914711_7.9941208377966_0.455073942166226 chr1 170255243 170255854 + 0.455073942166226 NA Intergenic CpG -21776 NM_012009 26904 Mm.57009 NM_012009 ENSMUSG00000102418 Sh2d1b1 EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b SH2 domain containing 1B1 protein-coding common_peak2_43_292_-0.108346800541941_8.14058345415128_0.45506742378439 chr7 28311375 28312582 + 0.45506742378439 NA promoter-TSS (NM_025616) promoter-TSS (NM_025616) 68 NM_025616 66525 Mm.167913 NM_025616 ENSMUSG00000003438 Timm50 2810403L02Rik|AU015082|TIM50L translocase of inner mitochondrial membrane 50 protein-coding common_peak1_105_833_-0.0615494968151946_9.67312882503706_0.454853753096414 chr12 100500837 100502237 + 0.454853753096414 NA intron (NM_001033213, intron 1 of 19) intron (NM_001033213, intron 1 of 19) 19285 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak1_90_694_-0.068524124890823_9.40660710516546_0.454822665456594 chr18 31804071 31804767 + 0.454822665456594 NA intron (NM_001170970, intron 1 of 7) CpG 362 NM_001170966 74320 Mm.277705 NM_028866 ENSMUSG00000024400 Wdr33 1110001N06Rik|2310011G05Rik|2810021O11Rik|8430413N20Rik|WDC146 WD repeat domain 33 protein-coding common_peak1_155_1327_-0.0488713593663519_10.3506037516637_0.454811458676611 chr8 46737857 46739521 + 0.454811458676611 NA intron (NR_045750, intron 1 of 2) intron (NR_045750, intron 1 of 2) 826 NR_045750 100503498 Mm.187358 NR_045750 ENSMUSG00000097534 Gm16675 - predicted gene, 16675 ncRNA common_peak1_17_80_0.164835358988043_6.42226768237865_0.45479003772142-3 chr10 39436494 39436907 + 0.45479003772142 NA intron (NM_001122892, intron 2 of 12) intron (NM_001122892, intron 2 of 12) 66901 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_17_80_0.164835358988043_6.42226768237865_0.45479003772142 chr1 54884397 54884849 + 0.45479003772142 NA intron (NM_001081433, intron 1 of 27) ORR1A3|LTR|ERVL-MaLR 41764 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_17_80_0.164835358988043_6.42226768237865_0.45479003772142-4 chr19 5872605 5873035 + 0.45479003772142 NA intron (NM_026169, intron 3 of 10) intron (NM_026169, intron 3 of 10) 2388 NM_026169 67457 Mm.202092 NM_026169 ENSMUSG00000024816 Frmd8 1200004M23Rik|2310035N23Rik|4931429L16Rik|AU018809 FERM domain containing 8 protein-coding common_peak1_17_80_0.164835358988043_6.42226768237865_0.45479003772142-2 chr1 120058397 120058836 + 0.45479003772142 NA intron (NM_001311077, intron 11 of 12) intron (NM_001311077, intron 11 of 12) 15164 NM_019432 170706 Mm.24750 NM_019432 ENSMUSG00000050777 Tmem37 AI173373|AW540203|Pr|Pr1 transmembrane protein 37 protein-coding common_peak2_197_1671_0.0407076429196369_10.7277129535407_0.454786607575177 chr9 78107529 78109660 + 0.454786607575177 NA promoter-TSS (NM_023605) promoter-TSS (NM_023605) 62 NM_023605 71538 Mm.28584 NM_023605 ENSMUSG00000001366 Fbxo9 9030401P18Rik|AA986398 f-box protein 9 protein-coding unique_peak2_36_238_-0.121083156769338_7.84032522959608_0.454684644330454 chr5 100500781 100502006 + 0.454684644330454 NA promoter-TSS (NM_172714) promoter-TSS (NM_172714) -754 NM_172714 231506 Mm.212568 NM_172714 ENSMUSG00000035310 Lin54 AI461788 lin-54 homolog (C. elegans) protein-coding unique_peak2_36_238_-0.121083156769338_7.84032522959608_0.454684644330454-2 chr6 66896250 66897276 + 0.454684644330454 NA promoter-TSS (NM_001177558) promoter-TSS (NM_001177558) -128 NM_001177558 14701 Mm.234342 NM_025278 ENSMUSG00000036402 Gng12 2010305F15Rik|AA536815|AI115529|AI314170|AI842738 guanine nucleotide binding protein (G protein), gamma 12 protein-coding common_peak2_231_2035_0.03697840199594_11.0100110470737_0.454574964169536 chr11 115411660 115415002 + 0.454574964169536 NA Intergenic tRNA-Arg-AGG|tRNA|tRNA 6588 NM_027862 71679 Mm.371641 NM_027862 ENSMUSG00000034566 Atp5h 0610009D10Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D protein-coding common_peak1_66_430_0.0789996410606246_8.79104387961941_0.454402968920021 chr2 166456762 166457978 + 0.454402968920021 NA intron (NR_015558, intron 2 of 2) B1_Mus1|SINE|Alu 9919 NR_015558 319684 Mm.399746 NR_015558 5031425F14Rik - RIKEN cDNA 5031425F14 gene ncRNA common_peak2_84_581_0.0667665049442085_9.21825859538039_0.454379180827619 chr16 32877040 32878654 + 0.454379180827619 NA promoter-TSS (NM_027226) promoter-TSS (NM_027226) 63 NM_001159349 69823 Mm.12831 NM_027226 ENSMUSG00000022800 Fyttd1 2010005M05Rik|3830411L18Rik|3830421F13Rik|4933423A17Rik|AI098218|AW539567|C85190 forty-two-three domain containing 1 protein-coding common_peak2_125_951_0.0534037078301957_9.92151961722304_0.454352644570819 chr10 42886651 42889071 + 0.454352644570819 NA intron (NM_172938, intron 1 of 8) intron (NM_172938, intron 1 of 8) 27349 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak1_47_323_-0.0994622236061726_8.29011889108154_0.454277931611093-2 chr13 51742501 51743338 + 0.454277931611093 NA intron (NM_001281880, intron 2 of 16) intron (NM_001281880, intron 2 of 16) 50828 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak1_47_323_-0.0994622236061726_8.29011889108154_0.454277931611093 chr12 17710920 17712000 + 0.454277931611093 NA intron (NM_016677, intron 1 of 3) MTC|LTR|ERVL-MaLR 20646 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_75_504_0.0734492481304461_9.01686420170438_0.453994534999948 chr7 117469460 117471586 + 0.453994534999948 NA intron (NM_175645, intron 1 of 11) intron (NM_175645, intron 1 of 11) 89544 NM_175645 233781 Mm.461427 NM_175645 ENSMUSG00000030657 Xylt1 8030490L12 xylosyltransferase 1 protein-coding common_peak1_127_1045_-0.0545769395627058_10.0033786664656_0.4538460484122 chr13 101658704 101660011 + 0.4538460484122 NA Intergenic Intergenic 33273 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_144_1215_-0.0511586120526957_10.2223482074172_0.453831348882544 chr13 21778507 21780965 + 0.453831348882544 NA TTS (NM_020034) TTS (NM_020034) 889 NM_020034 56702 Mm.221314 NM_020034 ENSMUSG00000058773 Hist1h1b H1.5|H1B|H1f5|H1s-3 histone cluster 1, H1b protein-coding common_peak2_198_1682_0.0401623325174683_10.7369006275887_0.45379543305026 chr1 37476720 37479889 + 0.45379543305026 NA intron (NM_001290801, intron 4 of 14) intron (NM_001290801, intron 4 of 14) 10301 NR_024017 77633 Mm.483177 NR_024017 ENSMUSG00000103948 4930594C11Rik - G1 to S phase transition pseudogene pseudo common_peak1_187_1662_-0.0432167434885375_10.677964081543_0.453754399146195 chr10 18916620 18918910 + 0.453754399146195 NA Intergenic Intergenic 72694 NM_022032 64058 Mm.28209 NM_022032 ENSMUSG00000019851 Perp 1110017A08Rik|KCP1|KRTCAP1|PIGPC1|THW PERP, TP53 apoptosis effector protein-coding common_peak1_59_422_-0.0892451093358897_8.67989129845201_0.453584476635283 chr1 33669339 33670317 + 0.453584476635283 NA promoter-TSS (NR_033199) promoter-TSS (NR_033199) 4 NR_033199 67503 Mm.87069 NM_026204 ENSMUSG00000103746 1700001G17Rik - RIKEN cDNA 1700001G17 gene ncRNA common_peak1_62_398_0.0813642237294374_8.68092704808706_0.453584476635283 chr14 52104373 52104987 + 0.453584476635283 NA promoter-TSS (NM_001170984) promoter-TSS (NM_001170984) -652 NM_001170984 15381 Mm.427321 NM_016884 ENSMUSG00000060373 Hnrnpc AL022939|D14Wsu171e|Hnrpc|Hnrpc1|Hnrpc2|hnRNPC1|hnRNPC2|hnrnp-C heterogeneous nuclear ribonucleoprotein C protein-coding common_peak2_46_275_0.0946066306478492_8.15582777210209_0.453445307693458 chr11 80075269 80076729 + 0.453445307693458 NA intron (NM_018776, intron 1 of 7) B1_Mus1|SINE|Alu 4992 NM_001277106 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding common_peak1_33_215_-0.124738930002941_7.692518037162_0.45302342443274 chr1 36763471 36764147 + 0.45302342443274 NA promoter-TSS (NM_001289766) promoter-TSS (NM_001289766) -706 NM_001289766 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak2_33_215_-0.124738930002941_7.692518037162_0.45302342443274 chr12 85485475 85486800 + 0.45302342443274 NA Intergenic CpG 12236 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak1_33_215_-0.124738930002941_7.692518037162_0.45302342443274-2 chr17 32052598 32053245 + 0.45302342443274 NA intron (NM_001163734, intron 6 of 12) intron (NM_001163734, intron 6 of 12) 4636 NM_001163734 72462 Mm.102761 NM_028244 ENSMUSG00000058392 Rrp1b 2600005C20Rik|D030064A17|Kiaa0179|mKIAA0179 ribosomal RNA processing 1 homolog B (S. cerevisiae) protein-coding unique_peak2_33_215_-0.124738930002941_7.692518037162_0.45302342443274-2 chr5 5558991 5559999 + 0.45302342443274 NA promoter-TSS (NM_153116) promoter-TSS (NM_153116) 6 NM_153116 207704 Mm.323984 NM_153116 ENSMUSG00000040464 Gtpbp10 4930545J22Rik|BC034507 GTP-binding protein 10 (putative) protein-coding unique_peak2_33_215_-0.124738930002941_7.692518037162_0.45302342443274 chr15 83418360 83420255 + 0.45302342443274 NA intron (NM_001159509, intron 1 of 10) intron (NM_001159509, intron 1 of 10) 13543 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_339_3270_0.0293504261424271_11.690191257154_0.452983168234133 chr17 69416320 69418350 + 0.452983168234133 NA non-coding (NR_026848, exon 1 of 1) non-coding (NR_026848, exon 1 of 1) 888 NR_026848 77533 Mm.266592 NR_026848 C030034I22Rik - RIKEN cDNA C030034I22 gene ncRNA common_peak2_32_175_0.117888329023582_7.51837578314909_0.452962818744474 chr5 148774484 148775483 + 0.452962818744474 NA Intergenic Intergenic -2980 NR_131106 78015 Mm.243839 NR_131106 ENSMUSG00000085740 4930505K14Rik - RIKEN cDNA 4930505K14 gene ncRNA common_peak1_32_175_0.117888329023582_7.51837578314909_0.452962818744474 chr2 30258554 30259238 + 0.452962818744474 NA intron (NM_177725, intron 3 of 3) intron (NM_177725, intron 3 of 3) -7307 NM_001252568 227696 Mm.297949 NM_172267 ENSMUSG00000079484 Phyhd1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding common_peak1_115_858_0.0553736157468183_9.77420112901187_0.45295637284175 chr6 48666310 48667647 + 0.45295637284175 NA Intergenic Intergenic -9157 NM_174960 317758 Mm.116971 NM_174960 ENSMUSG00000051124 Gimap9 A630002K24|BB145400 GTPase, IMAP family member 9 protein-coding common_peak2_101_795_-0.0623415322298371_9.60545385442873_0.452918918588784 chrX 106010914 106012832 + 0.452918918588784 NA promoter-TSS (NM_025952) promoter-TSS (NM_025952) 26 NM_001190409 67075 Mm.275943 NM_025952 ENSMUSG00000031232 Magt1 2410001C15Rik|2610529C04Rik|2810482I07Rik|IAG2|IAP magnesium transporter 1 protein-coding common_peak1_101_795_-0.0623415322298371_9.60545385442873_0.452918918588784 chr5 122779439 122780331 + 0.452918918588784 NA promoter-TSS (NM_001199676) promoter-TSS (NM_001199676) -475 NM_145358 207565 Mm.289237 NM_145358 ENSMUSG00000029471 Camkk2 6330570N16Rik|AW061083|mKIAA0787 calcium/calmodulin-dependent protein kinase kinase 2, beta protein-coding common_peak1_18_109_-0.18099551012777_6.69086195846078_0.452908205752178 chr10 127603816 127604368 + 0.452908205752178 NA intron (NM_008512, intron 6 of 88) intron (NM_008512, intron 6 of 88) 17056 NM_008512 16971 Mm.271854 NM_008512 ENSMUSG00000040249 Lrp1 A2mr|AI316852|CD91|Lrp|b2b1554Clo low density lipoprotein receptor-related protein 1 protein-coding unique_peak2_18_109_-0.18099551012777_6.69086195846078_0.452908205752178-2 chr8 64733157 64733801 + 0.452908205752178 NA promoter-TSS (NM_025436) promoter-TSS (NM_025436) 99 NM_025436 66234 Mm.30119 NM_025436 ENSMUSG00000031604 Msmo1 1500001G16Rik|C78600|DESP4|ERG25|Sc4mol methylsterol monoxygenase 1 protein-coding unique_peak2_18_109_-0.18099551012777_6.69086195846078_0.452908205752178 chr13 49200035 49200872 + 0.452908205752178 NA Intergenic (GGAA)n|Simple_repeat|Simple_repeat 12906 NM_013610 18081 Mm.18503 NM_013610 ENSMUSG00000037966 Ninj1 AU024536 ninjurin 1 protein-coding common_peak2_18_109_-0.18099551012777_6.69086195846078_0.452908205752178 chr1 164275382 164276121 + 0.452908205752178 NA 5' UTR (NM_029115, exon 1 of 6) 5' UTR (NM_029115, exon 1 of 6) 153 NM_029115 74895 Mm.167258 NM_029115 ENSMUSG00000026578 Ccdc181 4930455F23Rik|AI427889 coiled-coil domain containing 181 protein-coding common_peak2_169_1471_-0.0453077970181646_10.5009080575479_0.452821796713441 chr12 16587827 16590422 + 0.452821796713441 NA intron (NM_001130412, intron 1 of 20) intron (NM_001130412, intron 1 of 20) 646 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak2_91_703_-0.0677461921710734_9.42555852255176_0.452809036108371 chr8 75108622 75110209 + 0.452809036108371 NA promoter-TSS (NM_008566) promoter-TSS (NM_008566) -94 NM_001302540 17218 Mm.5048 NM_008566 ENSMUSG00000005410 Mcm5 AA617332|AI324988|AL033333|Cdc46|Mcmd5|P1-CDC46 minichromosome maintenance complex component 5 protein-coding common_peak1_96_749_-0.0654084220198339_9.51804257437333_0.452719242484065 chr4 132274178 132275207 + 0.452719242484065 NA intron (NM_025579, intron 1 of 5) intron (NM_025579, intron 1 of 5) 317 NM_025579 66464 Mm.331926 NM_025579 ENSMUSG00000028899 Taf12 20kDa|2810422D08Rik|AW557038|Taf2J TATA-box binding protein associated factor 12 protein-coding common_peak1_71_471_0.0752669348835386_8.92027651680361_0.45269238204897 chr15 99369748 99370573 + 0.45269238204897 NA intron (NM_001310623, intron 1 of 24) CpG 322 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_157_1347_-0.0478933788821863_10.3726580917408_0.452490899564288 chrX 140504439 140506688 + 0.452490899564288 NA Intergenic Intergenic 37105 NR_122039 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding common_peak2_117_948_-0.058125560792929_9.86120149662464_0.452342037346742 chr6 51523469 51526171 + 0.452342037346742 NA intron (NM_001127349, intron 1 of 6) intron (NM_001127349, intron 1 of 6) 917 NM_001127349 71982 Mm.294166 NM_028035 ENSMUSG00000038301 Snx10 2410004M09Rik sorting nexin 10 protein-coding common_peak2_220_1916_0.0379065543808537_10.9235878988586_0.452210140342489 chr2 35199664 35202008 + 0.452210140342489 NA 5' UTR (NM_026697, exon 1 of 8) 5' UTR (NM_026697, exon 1 of 8) 284 NM_026697 68365 Mm.198264 NM_026697 ENSMUSG00000026878 Rab14 0610030G24Rik|2810475J17Rik|A830021G03Rik|AI314285|AI649155|D030017L14Rik RAB14, member RAS oncogene family protein-coding common_peak1_39_224_0.103965347600095_7.86576386501708_0.452045471656003 chr1 43827850 43828498 + 0.452045471656003 NA promoter-TSS (NM_026430) promoter-TSS (NM_026430) -466 NM_026430 67883 Mm.387202 NM_026430 ENSMUSG00000057363 Uxs1 1600025I13Rik|AI451869|AI649125|AW550562 UDP-glucuronate decarboxylase 1 protein-coding common_peak2_121_914_0.0535038290619241_9.86437984770237_0.452017292970067 chr16 97961606 97963528 + 0.452017292970067 NA promoter-TSS (NM_175428) promoter-TSS (NM_175428) 54 NM_001081685 114565 Mm.474489 NM_175428 ENSMUSG00000046962 Zbtb21 5430437K12Rik|B430213I24Rik|Zfp295|Znf295|mKIAA1227 zinc finger and BTB domain containing 21 protein-coding common_peak1_13_77_-0.225449780030679_6.17267732884691_0.451948128797766 chr11 52280991 52281323 + 0.451948128797766 NA intron (NM_001313981, intron 3 of 10) (CAGA)n|Simple_repeat|Simple_repeat 1438 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding unique_peak2_13_77_-0.225449780030679_6.17267732884691_0.451948128797766 chr1 39948136 39948739 + 0.451948128797766 NA intron (NM_001252200, intron 2 of 31) intron (NM_001252200, intron 2 of 31) 47524 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding unique_peak2_13_77_-0.225449780030679_6.17267732884691_0.451948128797766-2 chr13 55182223 55182891 + 0.451948128797766 NA Intergenic Intergenic -27225 NM_008739 18193 Mm.12964 NM_008739 ENSMUSG00000021488 Nsd1 AI528500|KMT3B nuclear receptor-binding SET-domain protein 1 protein-coding common_peak1_168_1372_0.0446979383823098_10.4454648793383_0.451824296789568 chr16 44346799 44348281 + 0.451824296789568 NA intron (NM_144550, intron 1 of 17) CpG 139 NM_144550 212514 Mm.24035 NM_144550 ENSMUSG00000043065 Spice1 Ccdc52|D16Ertd480e spindle and centriole associated protein 1 protein-coding common_peak2_95_677_0.0618586273284638_9.43607077680058_0.451712974830186 chr6 52963921 52966421 + 0.451712974830186 NA intron (NM_173406, intron 1 of 4) AT_rich|Low_complexity|Low_complexity -55551 NM_001168277 231986 Mm.386865 NM_173406 ENSMUSG00000063568 Jazf1 AI591476|C820002C15|Jaz1|Tip27 JAZF zinc finger 1 protein-coding common_peak2_164_1419_-0.0462496798528438_10.4485503744656_0.451500445430907 chr10 41302286 41305922 + 0.451500445430907 NA promoter-TSS (NM_133999) promoter-TSS (NM_133999) -863 NM_133999 103199 Mm.277242 NM_133999 ENSMUSG00000038417 Fig4 A530089I17Rik|AI326867|Sac3 FIG4 phosphoinositide 5-phosphatase protein-coding common_peak1_20_98_0.148118023718888_6.70341563193905_0.451446206786942-2 chr2 118554973 118555490 + 0.451446206786942 NA Intergenic IAPLTR2_Mm|LTR|ERVK -5553 NM_138313 171543 Mm.210125 NM_138313 ENSMUSG00000040093 Bmf AW260063|AW411872 BCL2 modifying factor protein-coding unique_peak2_20_98_0.148118023718888_6.70341563193905_0.451446206786942-3 chr2 73475304 73476162 + 0.451446206786942 NA intron (NM_153138, intron 1 of 7) MLT1F2|LTR|ERVL-MaLR 10020 NM_001289723 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak2_20_98_0.148118023718888_6.70341563193905_0.451446206786942 chr1 92063744 92064452 + 0.451446206786942 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 116243 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding unique_peak2_20_98_0.148118023718888_6.70341563193905_0.451446206786942 chr13 67728960 67729625 + 0.451446206786942 NA promoter-TSS (NM_145622) promoter-TSS (NM_145622) 30 NR_027969 68271 Mm.145530 NM_026649 Zfp85os 4930441O14Rik zinc finger protein 85, opposite strand ncRNA common_peak1_20_98_0.148118023718888_6.70341563193905_0.451446206786942-3 chr7 102246632 102247221 + 0.451446206786942 NA intron (NM_019566, intron 1 of 1) intron (NM_019566, intron 1 of 1) 3192 NM_019566 56212 Mm.259795 NM_019566 ENSMUSG00000073982 Rhog 2810426G09Rik|Arhg|Sid10750 ras homolog family member G protein-coding common_peak1_20_98_0.148118023718888_6.70341563193905_0.451446206786942 chr19 40688672 40689212 + 0.451446206786942 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 29172 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak2_20_98_0.148118023718888_6.70341563193905_0.451446206786942-2 chr15 84557345 84558072 + 0.451446206786942 NA 5' UTR (NM_177630, exon 1 of 1) 5' UTR (NM_177630, exon 1 of 1) 115 NM_177630 223732 Mm.6471 NM_177630 ENSMUSG00000055745 Ldoc1l BC058638|Mar6|Mart6 leucine zipper, down-regulated in cancer 1-like protein-coding unique_peak2_20_98_0.148118023718888_6.70341563193905_0.451446206786942-2 chr2 69378444 69379470 + 0.451446206786942 NA Intergenic RSINE1|SINE|B4 -1505 NM_175512 241452 Mm.211655 NM_175512 ENSMUSG00000027068 Dhrs9 C730025I08Rik|Rdh15 dehydrogenase/reductase (SDR family) member 9 protein-coding common_peak1_29_155_0.123254213735454_7.34702932572998_0.451416119025556 chr6 129035645 129036213 + 0.451416119025556 NA Intergenic Intergenic -9972 NR_024262 232408 Mm.259262 NM_153094 ENSMUSG00000030154 Klrb1f A630024B12Rik|Nkr-p1f|Nkrp1-f|Nkrp1f killer cell lectin-like receptor subfamily B member 1F protein-coding common_peak1_127_970_0.0527627112650446_9.94970884105171_0.451405275975575 chr11 107409942 107411680 + 0.451405275975575 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 59909 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_76_513_0.0710969915791875_9.04117304498347_0.451379178283625 chr12 54734281 54735234 + 0.451379178283625 NA Intergenic CpG -38892 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak1_67_439_0.0754011698222232_8.81906029843577_0.451344910899386 chr11 85310536 85311121 + 0.451344910899386 NA promoter-TSS (NM_016910) promoter-TSS (NM_016910) -426 NM_016910 53892 Mm.45609 NM_016910 ENSMUSG00000020525 Ppm1d AV338790|Wip1 protein phosphatase 1D magnesium-dependent, delta isoform protein-coding common_peak2_67_439_0.0754011698222232_8.81906029843577_0.451344910899386 chr16 91596344 91597875 + 0.451344910899386 NA intron (NM_030018, intron 1 of 6) intron (NM_030018, intron 1 of 6) 571 NM_030018 77975 Mm.290341 NM_030018 ENSMUSG00000022964 Tmem50b AU015466|AU019872|B230114J08Rik transmembrane protein 50B protein-coding common_peak2_44_299_-0.10264005293125_8.17749866403026_0.451334904717504 chr9 56206498 56208130 + 0.451334904717504 NA exon (NM_172924, exon 7 of 7) exon (NM_172924, exon 7 of 7) -46244 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding unique_peak2_44_299_-0.10264005293125_8.17749866403026_0.451334904717504 chr2 73478899 73481058 + 0.451334904717504 NA intron (NM_153138, intron 1 of 7) B4|SINE|B4 5775 NM_001289723 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak1_44_299_-0.10264005293125_8.17749866403026_0.451334904717504 chr16 91373605 91374358 + 0.451334904717504 NA intron (NM_010509, intron 1 of 8) intron (NM_010509, intron 1 of 8) 1198 NM_001110498 15976 Mm.6834 NM_010509 ENSMUSG00000022971 Ifnar2 AI747302|Ifnar-2 interferon (alpha and beta) receptor 2 protein-coding unique_peak2_44_299_-0.10264005293125_8.17749866403026_0.451334904717504-2 chr8 13664759 13666842 + 0.451334904717504 NA intron (NM_009025, intron 1 of 23) intron (NM_009025, intron 1 of 23) 11787 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding unique_peak2_30_193_-0.133230637452821_7.53329752346072_0.451319271089027 chr5 105685177 105686443 + 0.451319271089027 NA Intergenic B1_Mus1|SINE|Alu -14159 NM_001122768 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_30_193_-0.133230637452821_7.53329752346072_0.451319271089027 chr13 112062227 112062792 + 0.451319271089027 NA Intergenic Intergenic 194573 NR_130345 102636620 Mm.402328 NR_130345 ENSMUSG00000086111 Gm15326 OTTMUSG00000020187 predicted gene 15326 ncRNA common_peak1_30_193_-0.133230637452821_7.53329752346072_0.451319271089027-2 chr8 105347365 105347992 + 0.451319271089027 NA promoter-TSS (NM_001081332) promoter-TSS (NM_001081332) 292 NM_177699 234686 Mm.87724 NM_177699 ENSMUSG00000014778 Fhod1 BC017144|FHOS|FHOS1 formin homology 2 domain containing 1 protein-coding common_peak2_87_666_-0.0685205861179217_9.34728265812562_0.451145059689635 chr7 80900565 80902102 + 0.451145059689635 NA promoter-TSS (NM_028026) promoter-TSS (NM_028026) -64 NR_027976 71968 Mm.274226 NM_028026 ENSMUSG00000025722 Wdr73 1200011I23Rik|2410008B13Rik|AI848574|C85352 WD repeat domain 73 protein-coding common_peak1_73_541_-0.0757530789561045_9.04427250187582_0.451094093824156 chr1 171606550 171607809 + 0.451094093824156 NA non-coding (NR_102726, exon 1 of 10) non-coding (NR_102726, exon 1 of 10) 155 NR_102726 17085 Mm.560 NM_008534 ENSMUSG00000004707 Ly9 AI893573|CD229|Lgp100|Ly-9|SLAMF3|T100 lymphocyte antigen 9 protein-coding common_peak2_73_541_-0.0757530789561045_9.04427250187582_0.451094093824156 chr7 92560617 92562179 + 0.451094093824156 NA 5' UTR (NM_025515, exon 1 of 9) 5' UTR (NM_025515, exon 1 of 9) 249 NM_001162918 66365 Mm.21173 NM_025515 ENSMUSG00000030613 Ccdc90b 2310015N07Rik|C86558 coiled-coil domain containing 90B protein-coding common_peak1_26_135_0.134744725589256_7.15483520404497_0.450952931130511-3 chr4 134164566 134165127 + 0.450952931130511 NA intron (NM_144527, intron 3 of 13) intron (NM_144527, intron 3 of 13) 22239 NM_144527 70012 Mm.26542 NM_144527 ENSMUSG00000037443 Cep85 2410030J07Rik|AI173272|AI173504|Ccdc21 centrosomal protein 85 protein-coding unique_peak2_26_135_0.134744725589256_7.15483520404497_0.450952931130511 chr12 25216626 25217748 + 0.450952931130511 NA Intergenic Intergenic 88013 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_26_135_0.134744725589256_7.15483520404497_0.450952931130511-2 chr13 3917688 3918191 + 0.450952931130511 NA exon (NM_019671, exon 1 of 12) exon (NM_019671, exon 1 of 12) 281 NM_019671 56349 Mm.22261 NM_019671 ENSMUSG00000021215 Net1 Net1a|mNET1 neuroepithelial cell transforming gene 1 protein-coding common_peak1_26_135_0.134744725589256_7.15483520404497_0.450952931130511 chr10 108089633 108090245 + 0.450952931130511 NA Intergenic MER58B|DNA|hAT-Charlie -72461 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak1_21_129_-0.162570070334503_6.9410827778612_0.450887642954521 chr10 41893093 41893705 + 0.450887642954521 NA intron (NM_001013370, intron 1 of 9) intron (NM_001013370, intron 1 of 9) 5960 NM_001013370 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding common_peak1_23_116_0.14341074850869_6.94207009383775_0.450887642954521-2 chr3 137820765 137821272 + 0.450887642954521 NA Intergenic Intergenic -43469 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak1_23_116_0.14341074850869_6.94207009383775_0.450887642954521 chr10 96324960 96325610 + 0.450887642954521 NA Intergenic (CAAA)n|Simple_repeat|Simple_repeat 99078 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_23_116_0.14341074850869_6.94207009383775_0.450887642954521 chr15 77851018 77851862 + 0.450887642954521 NA Intergenic Intergenic -9265 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_23_116_0.14341074850869_6.94207009383775_0.450887642954521-3 chr9 90267081 90267715 + 0.450887642954521 NA intron (NM_194334, intron 1 of 12) B4|SINE|B4 3371 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak2_23_116_0.14341074850869_6.94207009383775_0.450887642954521-2 chr4 138962824 138963639 + 0.450887642954521 NA Intergenic B1F|SINE|Alu -3881 NM_025786 66825 Mm.252312 NM_025786 ENSMUSG00000070661 Rnf186 9130020G10Rik ring finger protein 186 protein-coding common_peak2_21_129_-0.162570070334503_6.9410827778612_0.450887642954521 chr4 132731797 132732540 + 0.450887642954521 NA TTS (NM_133888) TTS (NM_133888) 378 NM_201368 381560 Mm.44558 NM_201368 ENSMUSG00000037752 Xkr8 4931440N07Rik|AI597014|Gm1031|XRG8|mXkr8 X-linked Kx blood group related 8 protein-coding common_peak2_60_430_-0.0870246080421264_8.70803175506803_0.450663963297475 chr4 126320783 126321860 + 0.450663963297475 NA TTS (NM_011902) TTS (NM_011902) 382 NM_133883 100206 Mm.11285 NM_133883 ENSMUSG00000042558 Adprhl2 AI836109|Arh3 ADP-ribosylhydrolase like 2 protein-coding common_peak1_60_430_-0.0870246080421264_8.70803175506803_0.450663963297475 chr5 31290221 31291231 + 0.450663963297475 NA intron (NM_026298, intron 1 of 47) intron (NM_026298, intron 1 of 47) 388 NM_026298 67661 Mm.293023 NM_026298 ENSMUSG00000038564 Ift172 4930553F24Rik|Slb|avc1|wim intraflagellar transport 172 protein-coding common_peak2_135_1124_-0.0523360915711581_10.1095412403188_0.450553813573254 chr9 37347551 37349153 + 0.450553813573254 NA promoter-TSS (NM_001081429) promoter-TSS (NM_001081429) 40 NM_001081429 245902 Mm.390150 NM_001081429 ENSMUSG00000034303 Ccdc15 A630039F14Rik|D030074L19 coiled-coil domain containing 15 protein-coding common_peak1_27_171_-0.139700004684173_7.35641475236001_0.450495678226599 chr1 176824093 176824574 + 0.450495678226599 NA intron (NM_029756, intron 1 of 17) intron (NM_029756, intron 1 of 17) 9673 NM_029756 76816 Mm.171399 NM_029756 ENSMUSG00000026504 Sdccag8 2700048G21Rik|5730470G24Rik|Cccap serologically defined colon cancer antigen 8 protein-coding common_peak1_27_171_-0.139700004684173_7.35641475236001_0.450495678226599-3 chr5 124011839 124012459 + 0.450495678226599 NA intron (NM_177876, intron 1 of 3) intron (NM_177876, intron 1 of 3) 15297 NR_105999 102465625 NR_105999 ENSMUSG00000098454 Mir7032 Gm27309|mmu-mir-7032 microRNA 7032 ncRNA common_peak1_27_171_-0.139700004684173_7.35641475236001_0.450495678226599-2 chr12 82225200 82225869 + 0.450495678226599 NA intron (NM_001167983, intron 1 of 23) intron (NM_001167983, intron 1 of 23) 55518 NM_001167983 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding unique_peak2_27_171_-0.139700004684173_7.35641475236001_0.450495678226599 chr1 93305366 93306391 + 0.450495678226599 NA promoter-TSS (NM_178051) promoter-TSS (NM_178051) 1 NM_178051 69821 Mm.52809 NM_178051 ENSMUSG00000026273 Mterf4 1810059A23Rik|4933412H03Rik|Mterfd2 mitochondrial transcription termination factor 4 protein-coding common_peak1_43_253_0.0977253671081417_8.03754737032624_0.450377185910723 chr7 25297324 25298191 + 0.450377185910723 NA intron (NM_008776, intron 1 of 5) CpG-12842 198 NM_008776 18476 Mm.597 NM_008776 ENSMUSG00000005447 Pafah1b3 Pafahg|mus[g] platelet-activating factor acetylhydrolase, isoform 1b, subunit 3 protein-coding common_peak2_147_1244_-0.0489217533713191_10.2574691502698_0.450209232802575 chr4 136171630 136175799 + 0.450209232802575 NA intron (NM_177733, intron 1 of 6) intron (NM_177733, intron 1 of 6) 1440 NM_177733 242705 Mm.307932 NM_177733 ENSMUSG00000018983 E2f2 E2F-2 E2F transcription factor 2 protein-coding common_peak2_37_245_-0.115537990755993_7.88474550996124_0.450124845923196-2 chr13 38634360 38635552 + 0.450124845923196 NA exon (NM_139063, exon 1 of 5) exon (NM_139063, exon 1 of 5) 153 NM_139063 17828 Mm.261554 NM_139063 ENSMUSG00000038982 Bloc1s5 1810074A19Rik|Muted|mu biogenesis of lysosomal organelles complex-1, subunit 5, muted protein-coding common_peak1_37_245_-0.115537990755993_7.88474550996124_0.450124845923196 chr12 25337434 25337968 + 0.450124845923196 NA Intergenic Intergenic 208527 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_37_245_-0.115537990755993_7.88474550996124_0.450124845923196 chr10 61475167 61476603 + 0.450124845923196 NA promoter-TSS (NM_153542) promoter-TSS (NM_153542) 52 NM_153542 216011 Mm.136116 NM_153542 ENSMUSG00000037151 Lrrc20 BC036304 leucine rich repeat containing 20 protein-coding common_peak2_37_245_-0.115537990755993_7.88474550996124_0.450124845923196-3 chr2 130839578 130840730 + 0.450124845923196 NA promoter-TSS (NM_029432) promoter-TSS (NM_029432) -9 NM_029432 228602 Mm.271990 NM_028367 ENSMUSG00000027309 4930402H24Rik 2810487F15Rik|AI413763|C78926 RIKEN cDNA 4930402H24 gene protein-coding common_peak1_37_245_-0.115537990755993_7.88474550996124_0.450124845923196-2 chr2 93454653 93455321 + 0.450124845923196 NA intron (NR_040533, intron 1 of 2) LTR79|LTR|ERVL 2168 NR_040533 100038525 Mm.440596 NR_040532 ENSMUSG00000075025 Gm10804 ENSMUSG00000075025 predicted gene 10804 ncRNA common_peak2_78_585_-0.072657763308932_9.15842797276778_0.450119748748012-2 chr4 52438341 52439749 + 0.450119748748012 NA promoter-TSS (NR_045175) promoter-TSS (NR_045175) -81 NR_045175 72648 Mm.391869 NR_045175 ENSMUSG00000085763 Smc2os 2700081L22Rik structural maintenance of chromosomes 2, opposite strand ncRNA common_peak2_78_585_-0.072657763308932_9.15842797276778_0.450119748748012 chr18 80527881 80529887 + 0.450119748748012 NA Intergenic MTEa|LTR|ERVL-MaLR 15662 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo common_peak1_24_150_-0.152389547188695_7.16220996573073_0.449903677358099 chr3 107221357 107221962 + 0.449903677358099 NA promoter-TSS (NM_001111143) promoter-TSS (NM_001111143) 73 NM_001111143 229697 Mm.297051 NM_001111143 ENSMUSG00000046213 Cym Gm131 chymosin protein-coding unique_peak2_24_150_-0.152389547188695_7.16220996573073_0.449903677358099 chr12 98734089 98734872 + 0.449903677358099 NA 5' UTR (NM_011877, exon 1 of 19) 5' UTR (NM_011877, exon 1 of 19) 165 NM_011877 24000 Mm.4420 NM_011877 ENSMUSG00000021009 Ptpn21 PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 protein-coding common_peak1_47_282_0.0957295364465693_8.19252301105517_0.449790068907098-3 chr11 120948518 120949325 + 0.449790068907098 NA promoter-TSS (NM_001038654) promoter-TSS (NM_001038654) -146 NM_001038653 80879 Mm.28632 NM_030696 ENSMUSG00000025161 Slc16a3 Mct3|Mct4 solute carrier family 16 (monocarboxylic acid transporters), member 3 protein-coding common_peak1_47_282_0.0957295364465693_8.19252301105517_0.449790068907098 chr1 74816731 74817563 + 0.449790068907098 NA Intergenic CpG 25128 NM_009518 22409 Mm.5130 NM_009518 ENSMUSG00000026167 Wnt10a - wingless-type MMTV integration site family, member 10A protein-coding common_peak1_47_282_0.0957295364465693_8.19252301105517_0.449790068907098-2 chr11 70774682 70775654 + 0.449790068907098 NA Intergenic Intergenic 10721 NM_177565 193043 Mm.40966 NM_177565 ENSMUSG00000043602 Zfp3 AI854635|B230309J24|Fnp-1|Zfp-3 zinc finger protein 3 protein-coding common_peak2_96_686_0.0611720745453095_9.45475232609076_0.449779448084699 chr7 118276446 118278582 + 0.449779448084699 NA Intergenic Intergenic 33607 NR_027879 67745 Mm.483404 NM_183267 ENSMUSG00000055159 4930583K01Rik - RIKEN cDNA 4930583K01 gene ncRNA common_peak1_91_642_0.0630104991382758_9.36018017689709_0.449773906486812 chr16 75855625 75856722 + 0.449773906486812 NA Intergenic IMPB_01|Satellite|Satellite 53093 NM_023380 67742 Mm.131406 NM_023380 ENSMUSG00000022876 Samsn1 4930571B16Rik|930571B16Rik|Hacs1|SLy2 SAM domain, SH3 domain and nuclear localization signals, 1 protein-coding common_peak2_108_861_-0.0598018235594626_9.72164314730937_0.449749893110529 chr9 73039127 73040502 + 0.449749893110529 NA promoter-TSS (NM_018889) promoter-TSS (NM_018889) 96 NM_001308425 66364 Mm.392089 NM_001308425 2310009A05Rik 5031420N21Rik RIKEN cDNA 2310009A05 gene protein-coding common_peak1_108_861_-0.0598018235594626_9.72164314730937_0.449749893110529 chr15 93274251 93275295 + 0.449749893110529 NA intron (NM_001033275, intron 1 of 7) intron (NM_001033275, intron 1 of 7) 311 NM_001033275 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak1_59_375_0.0806798921064225_8.59492879773085_0.44965592827828 chr5 110809184 110810054 + 0.44965592827828 NA exon (NM_009469, exon 1 of 28) exon (NM_009469, exon 1 of 28) 462 NM_009469 22241 Mm.271898 NM_009469 ENSMUSG00000029512 Ulk1 AU041434|Unc51.1|mKIAA0722 unc-51 like kinase 1 protein-coding common_peak1_198_1780_-0.0414900072542004_10.7777267974745_0.449531121191749 chr1 179802768 179804598 + 0.449531121191749 NA 5' UTR (NM_026375, exon 1 of 36) 5' UTR (NM_026375, exon 1 of 36) 332 NM_026375 226747 Mm.128165 NM_026375 ENSMUSG00000026491 Ahctf1 6230412P20Rik|AV011447|Elys AT hook containing transcription factor 1 protein-coding common_peak1_55_343_0.0869123065021835_8.46972090795319_0.449499182689584 chr9 56097427 56098606 + 0.449499182689584 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 8040 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding unique_peak2_36_203_0.107358309239915_7.72610449659145_0.449428239152702 chr2 166774660 166776305 + 0.449428239152702 NA Intergenic RMER4B|LTR|ERVK -18285 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding common_peak2_36_203_0.107358309239915_7.72610449659145_0.449428239152702 chr11 62675288 62676509 + 0.449428239152702 NA Intergenic Intergenic 27234 NM_175002 216829 Mm.295306 NM_175002 ENSMUSG00000048497 Mmgt2 AI852046 membrane magnesium transporter 2 protein-coding common_peak1_36_203_0.107358309239915_7.72610449659145_0.449428239152702 chr4 151988471 151988972 + 0.449428239152702 NA TTS (NM_172705) TTS (NM_172705) 265 NM_175152 69876 Mm.226820 NM_175152 ENSMUSG00000039759 Thap3 2010013E08Rik|2210418H06Rik THAP domain containing, apoptosis associated protein 3 protein-coding common_peak2_83_630_-0.0707969288113386_9.26609773057688_0.449395328976604 chr14 52022164 52023963 + 0.449395328976604 NA Intergenic Intergenic -2330 NM_027248 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik zinc finger protein 219 protein-coding common_peak1_98_767_-0.0635080369069918_9.55320848226766_0.449082991155005 chr7 41392473 41393963 + 0.449082991155005 NA promoter-TSS (NM_183167) promoter-TSS (NM_183167) 42 NM_183167 233168 Mm.379390 NM_183167 ENSMUSG00000056383 AI987944 - expressed sequence AI987944 protein-coding common_peak2_51_313_0.0874128069356601_8.33832715235946_0.449065164711339 chr14 47517937 47519667 + 0.449065164711339 NA intron (NR_027414, intron 4 of 5) ID_B1|SINE|B4 46241 NM_001146085 78938 Mm.11935 NM_030236 ENSMUSG00000037536 Fbxo34 2900057B08Rik|5830426G16Rik F-box protein 34 protein-coding common_peak2_226_2087_-0.0379612495821533_11.0089253717788_0.44904829610686 chr6 120528030 120532118 + 0.44904829610686 NA intron (NM_144815, intron 1 of 7) intron (NM_144815, intron 1 of 7) 1225 NM_144815 214932 Mm.255322 NM_144815 ENSMUSG00000058979 Cecr5 A930002G03Rik cat eye syndrome chromosome region, candidate 5 protein-coding unique_peak2_11_64_-0.235204656122715_5.9047654849671_0.448977331118768 chr4 41639724 41640220 + 0.448977331118768 NA 5' UTR (NM_027147, exon 1 of 2) 5' UTR (NM_027147, exon 1 of 2) 330 NM_027147 69638 Mm.372459 NM_027147 ENSMUSG00000028445 Enho 1110065P19Rik|2310040A07Rik energy homeostasis associated protein-coding common_peak1_11_64_-0.235204656122715_5.9047654849671_0.448977331118768 chr15 96582783 96583195 + 0.448977331118768 NA intron (NM_134086, intron 12 of 15) MMERVK10C-int|LTR|ERVK 58973 NM_134086 105727 Mm.103568 NM_134086 ENSMUSG00000023169 Slc38a1 AA408026|AA409865|AL022800|AU015942|NAT2 solute carrier family 38, member 1 protein-coding common_peak2_74_550_-0.0757588002814913_9.06802910843041_0.448576173068674 chr19 40587459 40589969 + 0.448576173068674 NA promoter-TSS (NM_019698) promoter-TSS (NM_019698) -251 NM_153554 56454 Mm.233117 NM_019698 ENSMUSG00000025007 Aldh18a1 2810433K04Rik|AI429789|Pycs aldehyde dehydrogenase 18 family, member A1 protein-coding common_peak1_171_1403_0.043624572322102_10.4771395064656_0.448543595794242 chr17 56659897 56661895 + 0.448543595794242 NA intron (NM_175350, intron 18 of 21) MTC-int|LTR|ERVL-MaLR -12329 NM_001252466 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding common_peak1_186_1650_-0.0422067308112339_10.6680210395076_0.448492321365204 chr4 58910988 58913138 + 0.448492321365204 NA intron (NM_172381, intron 1 of 48) CpG 662 NM_172381 230249 Mm.234801 NM_172381 ENSMUSG00000050812 AI314180 AW558785|BB181316|mKIAA0368 expressed sequence AI314180 protein-coding common_peak2_271_2598_-0.0337554127526047_11.3268632120959_0.448179336743764 chr11 75678232 75680627 + 0.448179336743764 NA exon (NM_001277219, exon 1 of 3) exon (NM_001277219, exon 1 of 3) 170 NM_001277221 12928 Mm.280125 NM_133656 ENSMUSG00000017776 Crk Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38 v-crk avian sarcoma virus CT10 oncogene homolog protein-coding common_peak1_41_276_-0.109655211064334_8.05891456051702_0.448134619545782-2 chr4 136178944 136179825 + 0.448134619545782 NA intron (NM_177733, intron 2 of 6) intron (NM_177733, intron 2 of 6) -1398 NM_001305399 242705 Mm.307932 NM_177733 ENSMUSG00000018983 E2f2 E2F-2 E2F transcription factor 2 protein-coding common_peak1_41_276_-0.109655211064334_8.05891456051702_0.448134619545782 chr2 90488239 90489054 + 0.448134619545782 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -9472 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak2_41_276_-0.109655211064334_8.05891456051702_0.448134619545782 chr14 121329211 121331211 + 0.448134619545782 NA intron (NM_145465, intron 2 of 10) ORR1F|LTR|ERVL-MaLR 49019 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_34_222_-0.119454185396771_7.74117280722192_0.448037352970094 chr17 27118625 27119411 + 0.448037352970094 NA intron (NM_080553, intron 54 of 57) intron (NM_080553, intron 54 of 57) 14873 NM_026063 67267 Mm.272389 NM_026063 ENSMUSG00000024208 Uqcc2 2900010M23Rik|Cbp6|M19|Mnf1 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding common_peak1_34_222_-0.119454185396771_7.74117280722192_0.448037352970094-2 chr19 8985448 8986188 + 0.448037352970094 NA Intergenic B1F|SINE|Alu -3466 NR_104460 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak2_161_1388_-0.0468764898021572_10.4163926390803_0.447946137411321 chr10 84916641 84918353 + 0.447946137411321 NA promoter-TSS (NM_001013441) promoter-TSS (NM_001013441) -116 NM_001013441 237422 Mm.18936 NM_183172 ENSMUSG00000035620 Ric8b BC051080|Ric-8|Ric-8b RIC8 guanine nucleotide exchange factor B protein-coding common_peak1_97_695_0.0605450522483117_9.47321602197288_0.447894917644006 chr7 27859823 27861303 + 0.447894917644006 NA promoter-TSS (NM_001024726) promoter-TSS (NM_001024726) -22 NM_001024726 545938 Mm.458180 NM_001024726 ENSMUSG00000020420 Zfp607a 4732475C15Rik|Zfp607 zinc finger protein 607A protein-coding common_peak1_15_69_0.166970246180202_6.21276814003507_0.447862948295038-2 chr15 64025672 64026104 + 0.447862948295038 NA intron (NM_144846, intron 1 of 11) B4|SINE|B4 34560 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_15_69_0.166970246180202_6.21276814003507_0.447862948295038-3 chr18 37923417 37923785 + 0.447862948295038 NA intron (NM_001305981, intron 1 of 28) intron (NM_001305981, intron 1 of 28) 11822 NM_001305980 13367 Mm.195916 NM_007858 ENSMUSG00000024456 Diaph1 D18Wsu154e|Dia1|Diap1|Drf1|p140mDia diaphanous related formin 1 protein-coding common_peak1_15_69_0.166970246180202_6.21276814003507_0.447862948295038 chr13 73735965 73736327 + 0.447862948295038 NA Intergenic Intergenic -27551 NM_011390 20499 Mm.275800 NM_011390 ENSMUSG00000017756 Slc12a7 AA408796|D13Ertd261e|Kcc4 solute carrier family 12, member 7 protein-coding common_peak1_15_69_0.166970246180202_6.21276814003507_0.447862948295038-4 chr5 120907211 120907682 + 0.447862948295038 NA promoter-TSS (NM_145211) promoter-TSS (NM_145211) 79 NM_145211 246730 Mm.14301 NM_145211 ENSMUSG00000052776 Oas1a L3 2'-5' oligoadenylate synthetase 1A protein-coding unique_peak2_15_69_0.166970246180202_6.21276814003507_0.447862948295038 chr17 57284513 57285130 + 0.447862948295038 NA intron (NM_001163815, intron 2 of 27) MTE2b|LTR|ERVL-MaLR 5721 NM_001163815 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding common_peak1_61_438_-0.0847826136146956_8.73568582272801_0.447853184995306 chr10 75859610 75860477 + 0.447853184995306 NA intron (NM_010798, intron 1 of 2) CpG-1170 207 NM_010798 17319 Mm.2326 NM_010798 ENSMUSG00000033307 Mif GIF|Glif macrophage migration inhibitory factor protein-coding common_peak2_40_231_0.103462269937854_7.9097121300965_0.44763875601662 chr7 24393977 24395355 + 0.44763875601662 NA Intergenic Intergenic -4962 NM_028047 71997 Mm.150977 NM_028047 ENSMUSG00000002210 Smg9 1500002O20Rik|AI429693|N28092 smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_295_2878_-0.031731488792957_11.475486329167_0.447628255118442 chr15 12007691 12012174 + 0.447628255118442 NA Intergenic B3A|SINE|B2 -13925 NM_011294 20024 Mm.41746 NM_011294 ENSMUSG00000022205 Sub1 AI842364|P15|P9|Pc4|Rpo2tc1 SUB1 homolog (S. cerevisiae) protein-coding common_peak2_124_942_0.0530068183396075_9.9076173698449_0.447612972857468 chr11 58095636 58098724 + 0.447612972857468 NA Intergenic Intergenic -6973 NM_026949 69125 Mm.28910 NM_026949 ENSMUSG00000020515 Cnot8 1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059 CCR4-NOT transcription complex, subunit 8 protein-coding common_peak1_240_2135_0.0351555635670948_11.0782737134711_0.44747259852564 chr11 51605615 51607655 + 0.44747259852564 NA intron (NM_010448, intron 1 of 6) CpG-1915 246 NM_001048061 15384 Mm.256875 NM_010448 ENSMUSG00000020358 Hnrnpab 3010025C11Rik|CBF-A|Cgbfa|Hnrpab heterogeneous nuclear ribonucleoprotein A/B protein-coding unique_peak2_33_182_0.114448733876484_7.57292420522228_0.447361918655564 chr9 48811934 48813346 + 0.447361918655564 NA intron (NM_001033324, intron 2 of 6) intron (NM_001033324, intron 2 of 6) 23305 NM_001033324 235320 Mm.457803 NM_001033324 ENSMUSG00000066687 Zbtb16 AI467657|PLZF|Zfp145|lu zinc finger and BTB domain containing 16 protein-coding common_peak2_33_182_0.114448733876484_7.57292420522228_0.447361918655564 chr1 181235425 181236594 + 0.447361918655564 NA Intergenic MT2B|LTR|ERVL -24031 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding unique_peak2_45_307_-0.101713425415037_8.21592982798738_0.4472847353918 chr2 93423878 93425842 + 0.4472847353918 NA intron (NM_001271430, intron 5 of 8) intron (NM_001271430, intron 5 of 8) -2853 NR_105967 102465605 NR_105967 ENSMUSG00000099238 Mir7001 Gm27886|mmu-mir-7001 microRNA 7001 ncRNA common_peak2_126_1035_-0.0545975935125096_9.9895094909303_0.447262649891163 chr17 66110707 66112488 + 0.447262649891163 NA promoter-TSS (NM_001037757) promoter-TSS (NM_001037757) -48 NM_001037757 68767 Mm.296545 NM_026833 ENSMUSG00000024101 Washc1 1110049F14Rik|ORF19|Wash|Wash1 WASH complex subunit 1 protein-coding common_peak2_89_684_-0.0671692290969013_9.38637556329944_0.447105402947005 chr5 115348026 115349743 + 0.447105402947005 NA promoter-TSS (NM_007748) promoter-TSS (NM_007748) 71 NM_007748 12861 Mm.43415 NM_007748 ENSMUSG00000041697 Cox6a1 VIaL cytochrome c oxidase subunit VIa polypeptide 1 protein-coding common_peak2_53_371_-0.0903389330820801_8.49398934456699_0.447023919152796 chr1 171848737 171850344 + 0.447023919152796 NA intron (NM_001289470, intron 2 of 8) intron (NM_001289470, intron 2 of 8) 9843 NM_013489 12523 Mm.259115 NM_013489 ENSMUSG00000038147 Cd84 A130013D22Rik|CDw84|SLAMF5 CD84 antigen protein-coding common_peak2_181_1597_-0.0430943390215734_10.6205045234172_0.446995661174739 chr10 26771820 26774200 + 0.446995661174739 NA intron (NM_176837, intron 1 of 14) intron (NM_176837, intron 1 of 14) 498 NM_176837 73910 Mm.356496 NM_176837 ENSMUSG00000039031 Arhgap18 4833419J07Rik|AI314906|AI843501 Rho GTPase activating protein 18 protein-coding common_peak2_49_339_-0.0967634328149618_8.36100921973022_0.446811192018284-2 chr8 18950329 18951832 + 0.446811192018284 NA promoter-TSS (NM_001113350) promoter-TSS (NM_001113350) -105 NM_001113350 319581 Mm.111354 NM_176951 ENSMUSG00000039814 Xkr5 5430438H03Rik|XRG5 X-linked Kx blood group related 5 protein-coding common_peak2_49_339_-0.0967634328149618_8.36100921973022_0.446811192018284 chr6 130314537 130316893 + 0.446811192018284 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -7354 NM_024470 79410 Mm.482592 NM_024470 Klra23 Ly-49W1|Ly-49W2|Ly49W killer cell lectin-like receptor subfamily A, member 23 protein-coding common_peak2_78_530_0.0695310403091636_9.08733357095873_0.446675460794502 chr4 122877432 122879867 + 0.446675460794502 NA intron (NM_007598, intron 1 of 12) intron (NM_007598, intron 1 of 12) 7408 NM_007598 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak1_60_383_0.0795569503258164_8.62474097588406_0.446641104636049 chr14 25512995 25514166 + 0.446641104636049 NA intron (NM_001310666, intron 2 of 23) intron (NM_001310666, intron 2 of 23) -20859 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak1_60_383_0.0795569503258164_8.62474097588406_0.446641104636049-2 chr14 70765740 70766608 + 0.446641104636049 NA intron (NM_023045, intron 1 of 27) CpG 454 NM_023045 65246 Mm.152987 NM_023045 ENSMUSG00000022100 Xpo7 4930506C02Rik|BB164534|Ranbp16|mKIAA0745 exportin 7 protein-coding common_peak2_60_383_0.0795569503258164_8.62474097588406_0.446641104636049 chr8 125043923 125045422 + 0.446641104636049 NA Intergenic RLTR51A_Mm|LTR|ERVK? -9523 NM_174853 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding common_peak1_150_1274_-0.0477611467606689_10.2924009583659_0.446638605701909 chr10 80101999 80103404 + 0.446638605701909 NA promoter-TSS (NM_183426) promoter-TSS (NM_183426) 1 NM_183426 216161 Mm.262102 NM_183426 ENSMUSG00000035673 Sbno2 BC019206|F730040C21|Sno|Stno strawberry notch homolog 2 (Drosophila) protein-coding common_peak2_121_986_-0.0557745122230688_9.91901901834486_0.446401403054262 chr2 119896739 119898597 + 0.446401403054262 NA intron (NM_001164274, intron 1 of 22) CpG 440 NM_013720 29808 Mm.87532 NM_013720 ENSMUSG00000033943 Mga AV312082|C130042M01Rik|C80739|D030062C11Rik|Mad5 MAX gene associated protein-coding common_peak1_173_1424_0.0426639379127423_10.4980781728958_0.446401115554257 chr11 119491062 119492137 + 0.446401115554257 NA promoter-TSS (NM_177394) promoter-TSS (NM_177394) -21 NM_177394 338371 Mm.271946 NM_177394 ENSMUSG00000039850 Endov A730011L01Rik endonuclease V protein-coding unique_peak2_16_96_-0.196376581212956_6.50172455158065_0.446284217035615-3 chr4 129624556 129625212 + 0.446284217035615 NA promoter-TSS (NM_025455) promoter-TSS (NM_025455) -976 NM_025455 66264 Mm.383215 NM_025455 ENSMUSG00000028795 Ccdc28b 1110002E08Rik|1810010N17Rik coiled coil domain containing 28B protein-coding unique_peak2_16_96_-0.196376581212956_6.50172455158065_0.446284217035615-5 chr8 72317755 72318380 + 0.446284217035615 NA promoter-TSS (NM_008452) promoter-TSS (NM_008452) -995 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_16_96_-0.196376581212956_6.50172455158065_0.446284217035615 chr12 85472435 85472860 + 0.446284217035615 NA Intergenic Intergenic -1254 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak1_16_96_-0.196376581212956_6.50172455158065_0.446284217035615-2 chr7 66149294 66149752 + 0.446284217035615 NA intron (NM_001081163, intron 2 of 2) B3A|SINE|B2 40008 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding unique_peak2_16_96_-0.196376581212956_6.50172455158065_0.446284217035615 chr17 88758131 88759057 + 0.446284217035615 NA intron (NM_013582, intron 6 of 10) intron (NM_013582, intron 6 of 10) 33382 NM_013582 16867 Mm.1644 NM_013582 ENSMUSG00000024107 Lhcgr Gpcr19-rs1|LH-R|Lhr luteinizing hormone/choriogonadotropin receptor protein-coding common_peak1_16_96_-0.196376581212956_6.50172455158065_0.446284217035615-3 chr7 142373582 142374045 + 0.446284217035615 NA Intergenic Intergenic -1554 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding unique_peak2_16_96_-0.196376581212956_6.50172455158065_0.446284217035615-2 chr3 7503348 7504038 + 0.446284217035615 NA intron (NM_173181, intron 1 of 8) CpG 267 NM_173181 67306 Mm.332366 NM_173181 ENSMUSG00000043542 Zc2hc1a 3110050N22Rik|AI790358|AU023959|Fam164a zinc finger, C2HC-type containing 1A protein-coding common_peak2_16_96_-0.196376581212956_6.50172455158065_0.446284217035615 chr17 8388845 8389681 + 0.446284217035615 NA non-coding (NR_045795, exon 1 of 3) non-coding (NR_045795, exon 1 of 3) 205 NR_045795 100504601 Mm.365131 NR_045795 ENSMUSG00000097796 Gm16702 AU016609 predicted gene, 16702 ncRNA unique_peak2_16_96_-0.196376581212956_6.50172455158065_0.446284217035615-4 chr5 124026533 124027242 + 0.446284217035615 NA intron (NM_177876, intron 1 of 3) intron (NM_177876, intron 1 of 3) 5373 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak2_69_455_0.0751680115451485_8.87047401993732_0.446199194950271 chr11 22691846 22694217 + 0.446199194950271 NA Intergenic Intergenic 166704 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak2_66_480_-0.0793493836203183_8.87021839195988_0.446199194950271 chr1 131021195 131023693 + 0.446199194950271 NA intron (NM_010548, intron 3 of 4) intron (NM_010548, intron 3 of 4) 2599 NM_010548 16153 Mm.874 NM_010548 ENSMUSG00000016529 Il10 CSIF|Il-10 interleukin 10 protein-coding common_peak1_83_573_0.0657923394955233_9.19780309642345_0.446055191925173-2 chr8 88137628 88138605 + 0.446055191925173 NA promoter-TSS (NR_106039) promoter-TSS (NR_106039) -90 NR_106039 102465649 NR_106039 ENSMUSG00000099080 Mir7071 Gm27623|mmu-mir-7071 microRNA 7071 ncRNA common_peak1_83_573_0.0657923394955233_9.19780309642345_0.446055191925173 chr14 67716129 67716977 + 0.446055191925173 NA promoter-TSS (NM_001110162) promoter-TSS (NM_001110162) 455 NM_001285933 105440 Mm.6720 NM_134073 ENSMUSG00000034327 Kctd9 - potassium channel tetramerisation domain containing 9 protein-coding common_peak1_105_832_-0.0598186087360801_9.67226338099751_0.446026612688947 chr17 47526255 47528073 + 0.446026612688947 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 22113 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak2_413_4175_0.0254361510165477_12.0406240720782_0.446011522501515 chr2 11189108 11195920 + 0.446011522501515 NA intron (NM_008859, intron 1 of 17) intron (NM_008859, intron 1 of 17) 20132 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak2_9_52_-0.263398538118779_5.59622118550381_0.445962842009412 chr15 103272216 103272678 + 0.445962842009412 NA promoter-TSS (NM_019817) promoter-TSS (NM_019817) -471 NM_019817 56447 Mm.29473 NM_019817 ENSMUSG00000060992 Copz1 5930435A22Rik|AA407760|D4Ertd360e coatomer protein complex, subunit zeta 1 protein-coding common_peak1_52_320_0.0893122783208096_8.37108562628271_0.445928708359199 chr4 141454354 141455377 + 0.445928708359199 NA intron (NM_009541, intron 2 of 15) intron (NM_009541, intron 2 of 15) 10192 NM_009541 22642 Mm.389590 NM_009541 ENSMUSG00000006215 Zbtb17 AA589413|Lp-1|Miz1|Zfp100|mZ13 zinc finger and BTB domain containing 17 protein-coding common_peak1_31_200_-0.128186116867404_7.58695863274523_0.445836740051874 chr3 109360322 109360922 + 0.445836740051874 NA intron (NM_020505, intron 1 of 26) intron (NM_020505, intron 1 of 26) 19939 NM_020505 57257 Mm.282257 NM_020505 ENSMUSG00000033721 Vav3 A530094I06Rik|AA986410|Idd18.1 vav 3 oncogene protein-coding unique_peak2_31_200_-0.128186116867404_7.58695863274523_0.445836740051874 chr14 76556100 76557334 + 0.445836740051874 NA promoter-TSS (NM_001160326) promoter-TSS (NM_001160326) -30 NM_001160326 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding common_peak2_38_252_-0.11005012508645_7.92796851215109_0.445827937807005-2 chr6 127142098 127143583 + 0.445827937807005 NA intron (NM_009829, intron 3 of 4) intron (NM_009829, intron 3 of 4) -6549 NR_040274 77558 Mm.358918 NR_040273 ENSMUSG00000097166 9330179D12Rik - RIKEN cDNA 9330179D12 gene ncRNA common_peak2_38_252_-0.11005012508645_7.92796851215109_0.445827937807005 chr2 164822555 164823778 + 0.445827937807005 NA 5' UTR (NM_028028, exon 1 of 2) 5' UTR (NM_028028, exon 1 of 2) 480 NM_028028 71971 Mm.161149 NM_028028 ENSMUSG00000017764 Zswim1 2410003H12Rik|AI850991|BB046916 zinc finger SWIM-type containing 1 protein-coding common_peak1_38_252_-0.11005012508645_7.92796851215109_0.445827937807005 chr3 9249255 9249844 + 0.445827937807005 NA Intergenic Intergenic -1018 NM_177660 229055 Mm.103262 NM_177660 ENSMUSG00000069114 Zbtb10 4832414A18|AU021107|RINZF zinc finger and BTB domain containing 10 protein-coding common_peak1_93_660_0.0612369371046828_9.39912493006003_0.445806740119668 chr4 41755228 41756204 + 0.445806740119668 NA promoter-TSS (NM_001302511) promoter-TSS (NM_001302511) 488 NM_016658 14430 Mm.439669 NM_016658 ENSMUSG00000036073 Galt AW553376 galactose-1-phosphate uridyl transferase protein-coding common_peak1_85_647_-0.0675105214443192_9.30609474216246_0.445406935664112 chr5 21786316 21787492 + 0.445406935664112 NA intron (NM_011188, intron 2 of 12) CpG-10856 1621 NM_011188 19181 Mm.2462 NM_011188 ENSMUSG00000028932 Psmc2 - proteasome (prosome, macropain) 26S subunit, ATPase 2 protein-coding common_peak1_120_905_0.0531996045892136_9.84996704234084_0.445214996713567 chr4 149425746 149426846 + 0.445214996713567 NA 5' UTR (NM_022022, exon 1 of 27) 5' UTR (NM_022022, exon 1 of 27) 335 NM_022022 63958 Mm.415260 NM_022022 ENSMUSG00000028960 Ube4b 4930551I19Rik|4933406G05Rik|AU014668|D4Bwg0973e|UFD2|UFD2a|Ufd2p|mKIAA0684 ubiquitination factor E4B protein-coding common_peak1_30_162_0.117954050503229_7.40770517948269_0.445201336854712-3 chr5 123378340 123378960 + 0.445201336854712 NA Intergenic Intergenic -16148 NM_177582 208104 Mm.83277 NM_133917 ENSMUSG00000038342 Mlxip AW228700|Mir|bHLHe36 MLX interacting protein protein-coding common_peak1_30_162_0.117954050503229_7.40770517948269_0.445201336854712 chr15 77821013 77821782 + 0.445201336854712 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 20778 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_30_162_0.117954050503229_7.40770517948269_0.445201336854712-2 chr3 61407157 61407698 + 0.445201336854712 NA Intergenic Lx5c|LINE|L1 42920 NM_028712 74012 Mm.422674 NM_028712 ENSMUSG00000036894 Rap2b 4021402C18Rik|AA408554 RAP2B, member of RAS oncogene family protein-coding common_peak2_62_446_-0.0825218612315357_8.76287009056755_0.445146070246221 chr17 47530681 47532755 + 0.445146070246221 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 26667 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak2_258_2335_0.0334952015968639_11.2065721596784_0.445124300379807 chr13 96508993 96512573 + 0.445124300379807 NA intron (NM_012048, intron 3 of 14) intron (NM_012048, intron 3 of 14) 31702 NM_012048 27015 Mm.89926 NM_012048 ENSMUSG00000021668 Polk DINP|Dinb1 polymerase (DNA directed), kappa protein-coding common_peak2_122_995_-0.0544241508493712_9.9327898566434_0.445062107844895 chr19 24526335 24528612 + 0.445062107844895 NA intron (NM_008846, intron 1 of 14) intron (NM_008846, intron 1 of 14) 28354 NM_008846 18719 Mm.217214 NM_008846 ENSMUSG00000024867 Pip5k1b PI4P5K-I[b]|PIP5K1-beta|PIP5KIbeta|Pipk5b|STM7 phosphatidylinositol-4-phosphate 5-kinase, type 1 beta protein-coding common_peak1_111_889_-0.0578721534631228_9.7687254491222_0.444973868374454 chr5 122850045 122850993 + 0.444973868374454 NA intron (NM_030564, intron 1 of 5) CpG 331 NM_030564 80751 Mm.388529 NM_030564 ENSMUSG00000029474 Rnf34 AW061037|AW536122|BC004042|C88279|RIFF ring finger protein 34 protein-coding common_peak1_65_423_0.0760118042840379_8.76592635670522_0.444814684748012 chr4 59783148 59783873 + 0.444814684748012 NA intron (NM_001013577, intron 1 of 4) CpG 345 NM_001013577 66209 Mm.51988 NM_001013577 ENSMUSG00000038544 Inip 1110054O05Rik|2610312O17Rik|AA399876|Ssbip1 INTS3 and NABP interacting protein protein-coding common_peak1_18_86_0.157420707548162_6.52165384962281_0.444694812276494 chr10 18064820 18065230 + 0.444694812276494 NA intron (NM_009048, intron 1 of 19) intron (NM_009048, intron 1 of 19) 9085 NM_001111065 19707 Mm.4479 NM_009048 ENSMUSG00000019854 Reps1 BB161292 RalBP1 associated Eps domain containing protein protein-coding common_peak1_37_210_0.105877325876061_7.77403785164522_0.44467162171131 chr16 10979639 10980317 + 0.44467162171131 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 13143 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor protein-coding common_peak2_162_1313_0.0440948835990405_10.3817970021218_0.444607040420582 chr2 18671690 18673573 + 0.444607040420582 NA intron (NM_147778, intron 1 of 7) CpG 169 NM_147778 12238 Mm.249586 NM_147778 ENSMUSG00000051154 Commd3 AW550818|Bup|D2Ertd542e COMM domain containing 3 protein-coding unique_peak2_19_115_-0.166846767496796_6.77455761137917_0.444539229906122 chr17 73262479 73263150 + 0.444539229906122 NA Intergenic PB1D10|SINE|Alu 136482 NM_001033444 381122 Mm.81496 NM_001033444 ENSMUSG00000043705 Capn13 CANP 13|Gm943 calpain 13 protein-coding common_peak1_19_115_-0.166846767496796_6.77455761137917_0.444539229906122 chr10 19209172 19209637 + 0.444539229906122 NA Intergenic Intergenic 42166 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA unique_peak2_28_178_-0.135152462751688_7.41623954588841_0.444355209468068 chr17 57285170 57286728 + 0.444355209468068 NA intron (NM_001163815, intron 2 of 27) B3A|SINE|B2 6849 NM_001163815 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding common_peak1_134_1113_-0.0512203636221162_10.095923335529_0.444346440352726 chr6 100286377 100287531 + 0.444346440352726 NA intron (NM_019743, intron 1 of 4) CpG 404 NM_019743 56353 Mm.321633 NM_019743 ENSMUSG00000072872 Rybp 2410018J24Rik|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding common_peak2_99_713_0.0594595504799962_9.5095100392691_0.444265579723404 chr9 108507040 108508786 + 0.444265579723404 NA promoter-TSS (NM_133794) promoter-TSS (NM_133794) -92 NM_133794 97541 Mm.272427 NM_133794 ENSMUSG00000032604 Qars 1110018N24Rik|1200016L19Rik|C80286|GLNRS glutaminyl-tRNA synthetase protein-coding common_peak2_138_1076_0.0491822462483942_10.0973936576684_0.444215544612206 chr15 57771925 57773992 + 0.444215544612206 NA intron (NM_199449, intron 2 of 3) intron (NM_199449, intron 2 of 3) 78291 NM_199449 387609 Mm.36557 NM_199449 ENSMUSG00000071757 Zhx2 Afr-1|Afr1|Raf|mKIAA0854 zinc fingers and homeoboxes 2 protein-coding common_peak1_140_1173_-0.0499510895307491_10.1722411483447_0.444201511333206 chr1 138178958 138180986 + 0.444201511333206 NA Intergenic RMER15|LTR|ERVL -4667 NM_001268286 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak2_58_413_-0.0879605524574991_8.64950668127057_0.444101729488529 chr12 20920505 20921928 + 0.444101729488529 NA Intergenic CpG -105437 NR_015521 69513 Mm.273972 NR_015521 ENSMUSG00000099759 1700030C10Rik - RIKEN cDNA 1700030C10 gene ncRNA common_peak2_58_413_-0.0879605524574991_8.64950668127057_0.444101729488529-2 chr19 60860746 60862270 + 0.444101729488529 NA promoter-TSS (NM_053198) promoter-TSS (NM_053198) -78 NM_053198 94281 Mm.48179 NM_053198 ENSMUSG00000063698 Sfxn4 - sideroflexin 4 protein-coding common_peak1_58_413_-0.0879605524574991_8.64950668127057_0.444101729488529 chr17 31223968 31224889 + 0.444101729488529 NA intron (NM_177823, intron 6 of 13) intron (NM_177823, intron 6 of 13) 16362 NM_177823 328795 Mm.387930 NM_177823 ENSMUSG00000042345 Ubash3a 5830413C03Rik|C330001M22|Sts-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing, A protein-coding common_peak2_27_142_0.126693413239536_7.22321804339816_0.443904254496326 chr6 29985173 29986216 + 0.443904254496326 NA intron (NR_040264, intron 1 of 1) intron (NR_040264, intron 1 of 1) 365 NR_040263 76419 Mm.84522 NR_040263 ENSMUSG00000045709 Smkr-ps 1700023L04Rik smal lysine rich protein 1, pseudogene ncRNA unique_peak2_27_142_0.126693413239536_7.22321804339816_0.443904254496326 chr15 27517595 27518697 + 0.443904254496326 NA intron (NM_020332, intron 1 of 11) intron (NM_020332, intron 1 of 11) 51469 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding unique_peak2_27_142_0.126693413239536_7.22321804339816_0.443904254496326-2 chr3 137845758 137846775 + 0.443904254496326 NA Intergenic MTD|LTR|ERVL-MaLR -18221 NM_001316995 51788 Mm.117541 NM_016750 ENSMUSG00000037894 H2afz H2A.Z|H2a.z-1 H2A histone family, member Z protein-coding common_peak1_27_142_0.126693413239536_7.22321804339816_0.443904254496326 chr11 88113698 88114234 + 0.443904254496326 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) 14820 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_84_582_0.0642897746519946_9.2194969605265_0.443864808105697-2 chr8 124947901 124950216 + 0.443864808105697 NA 5' UTR (NM_053207, exon 1 of 5) 5' UTR (NM_053207, exon 1 of 5) 196 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding common_peak2_84_582_0.0642897746519946_9.2194969605265_0.443864808105697 chr2 70090718 70093200 + 0.443864808105697 NA intron (NM_177376, intron 2 of 34) RLTR14|LTR|ERV1 52833 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding common_peak1_89_625_0.0627721018183696_9.3214048978418_0.443826305815049-2 chr5 67306395 67307568 + 0.443826305815049 NA promoter-TSS (NM_178651) promoter-TSS (NM_178651) 26 NM_001310629 109108 Mm.234455 NM_178651 ENSMUSG00000029221 Slc30a9 2310024J23Rik|AL024256|GAC63|HUEL|znT-9 solute carrier family 30 (zinc transporter), member 9 protein-coding common_peak1_89_625_0.0627721018183696_9.3214048978418_0.443826305815049 chr10 81643060 81644181 + 0.443826305815049 NA exon (NM_027480, exon 17 of 20) exon (NM_027480, exon 17 of 20) -5449 NM_001142963 100233208 Mm.327168 NM_001142963 ENSMUSG00000096856 Gm10778 ENSMUSG00000074860 predicted gene 10778 protein-coding common_peak1_89_625_0.0627721018183696_9.3214048978418_0.443826305815049-3 chr9 41104505 41106052 + 0.443826305815049 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) 52216 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak2_189_1589_0.0402710512898494_10.6549465758166_0.443554546859718 chr19 53599652 53601738 + 0.443554546859718 NA intron (NM_007790, intron 1 of 28) CpG 299 NM_007790 13006 Mm.14910 NM_007790 ENSMUSG00000024974 Smc3 Bamacan|Cspg6|HCAP|Mmip1|SMC-3|SmcD structural maintenance of chromosomes 3 protein-coding common_peak1_163_1323_0.0439804806309212_10.3926776471227_0.443538671561187 chr7 122065994 122068120 + 0.443538671561187 NA promoter-TSS (NM_026140) promoter-TSS (NM_026140) 29 NM_026140 67417 Mm.45171 NM_026140 ENSMUSG00000030871 Ears2 3230401I01Rik|mKIAA1970 glutamyl-tRNA synthetase 2, mitochondrial protein-coding common_peak2_70_464_0.0720726398516227_8.89712322592121_0.443456644028013 chr9 31385517 31387047 + 0.443456644028013 NA promoter-TSS (NM_172766) promoter-TSS (NM_172766) 90 NM_172766 235134 Mm.238146 NM_172766 ENSMUSG00000042185 Nfrkb A530090G11Rik nuclear factor related to kappa B binding protein protein-coding common_peak1_46_315_-0.100649660751085_8.25345591780156_0.443447151406836 chr5 148928713 148929132 + 0.443447151406836 NA promoter-TSS (NM_153572) promoter-TSS (NM_153572) -275 NM_153572 231912 Mm.397405 NM_153572 ENSMUSG00000041298 Katnal1 - katanin p60 subunit A-like 1 protein-coding common_peak2_35_229_-0.114192377885352_7.7883938620017_0.443368100892587 chr10 30600026 30601206 + 0.443368100892587 NA exon (NM_028604, exon 1 of 13) exon (NM_028604, exon 1 of 13) 133 NM_028604 73681 Mm.294503 NM_028604 ENSMUSG00000019792 Trmt11 2410075D05Rik|3110045I18Rik|AW213713 tRNA methyltransferase 11 protein-coding common_peak1_35_229_-0.114192377885352_7.7883938620017_0.443368100892587 chrX 99470023 99470725 + 0.443368100892587 NA intron (NM_001290555, intron 1 of 1) intron (NM_001290555, intron 1 of 1) 361 NM_001083110 18744 Mm.8211 NM_008853 ENSMUSG00000034403 Pja1 praja-1 praja ring finger 1, E3 ubiquitin protein ligase protein-coding common_peak2_50_347_-0.0952727187212723_8.39530713648809_0.443344229368461 chr8 120719187 120720735 + 0.443344229368461 NA Intergenic Intergenic -16397 NM_008320 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak1_21_104_0.145552225027829_6.78702163018004_0.443233298250143 chr4 40774344 40774887 + 0.443233298250143 NA Intergenic Intergenic -16730 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding common_peak2_21_104_0.145552225027829_6.78702163018004_0.443233298250143 chr10 127148289 127148980 + 0.443233298250143 NA Intergenic RMER10B|LTR|ERVL -16522 NR_045166 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding unique_peak2_21_104_0.145552225027829_6.78702163018004_0.443233298250143 chr4 11762952 11763918 + 0.443233298250143 NA intron (NM_019753, intron 1 of 17) intron (NM_019753, intron 1 of 17) 5278 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak2_21_104_0.145552225027829_6.78702163018004_0.443233298250143-2 chr14 121317818 121318572 + 0.443233298250143 NA intron (NM_145465, intron 2 of 10) intron (NM_145465, intron 2 of 10) 61035 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_147_1243_-0.0477624965464791_10.2568895218574_0.443078676306677 chr11 75486157 75488212 + 0.443078676306677 NA exon (NM_138659, exon 1 of 42) exon (NM_138659, exon 1 of 42) 407 NM_138659 192159 Mm.3757 NM_138659 ENSMUSG00000020850 Prpf8 AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l pre-mRNA processing factor 8 protein-coding common_peak1_57_359_0.0834225293692512_8.5335643610143_0.443076958115062 chr11 80077939 80079309 + 0.443076958115062 NA intron (NM_018776, intron 1 of 7) intron (NM_018776, intron 1 of 7) 2367 NM_001277106 54394 Mm.272093 NM_018776 ENSMUSG00000017561 Crlf3 BB164954|Creme9|Cytor4 cytokine receptor-like factor 3 protein-coding common_peak2_105_767_0.0573915759083121_9.61365828867531_0.443031433672306 chr12 98282387 98284361 + 0.443031433672306 NA Intergenic MamGypLTR1c|LTR|Gypsy 14739 NM_008152 14744 Mm.378924 NM_008152 ENSMUSG00000021886 Gpr65 Dig1|Gpcr25|TDAG8 G-protein coupled receptor 65 protein-coding common_peak2_25_157_-0.148359503536171_7.22960099640902_0.442951064713128 chr15 79752532 79753128 + 0.442951064713128 NA non-coding (NR_045069, exon 4 of 4) non-coding (NR_045069, exon 4 of 4) 10132 NR_045069 100504191 Mm.421420 NR_045069 ENSMUSG00000087543 Gm16576 - predicted gene 16576 ncRNA common_peak2_41_239_0.0971963593763361_7.95548877529669_0.442907328608271 chr14 61555985 61556830 + 0.442907328608271 NA intron (NM_001310603, intron 1 of 3) CpG 479 NM_025697 66674 Mm.282706 NM_025697 ENSMUSG00000021930 Spryd7 6330409N04Rik|Clld6 SPRY domain containing 7 protein-coding common_peak2_24_123_0.131818881749509_7.02010575126163_0.442780220986476 chr2 29619110 29619627 + 0.442780220986476 NA promoter-TSS (NM_001039086) promoter-TSS (NM_001039086) -352 NM_054050 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_24_123_0.131818881749509_7.02010575126163_0.442780220986476-2 chr9 62122888 62123582 + 0.442780220986476 NA promoter-TSS (NR_039595) promoter-TSS (NR_039595) -641 NR_039595 100628602 NR_039595 ENSMUSG00000092696 Mir5133 mir-5133|mmu-mir-5133|mu-mir-5133 microRNA 5133 ncRNA unique_peak2_22_136_-0.159571278867016_7.01824644352702_0.442780220986476 chr8 124662682 124663521 + 0.442780220986476 NA exon (NM_175149, exon 1 of 4) exon (NM_175149, exon 1 of 4) 268 NM_175149 69551 Mm.261920 NM_175149 ENSMUSG00000031983 2310022B05Rik - RIKEN cDNA 2310022B05 gene protein-coding common_peak1_24_123_0.131818881749509_7.02010575126163_0.442780220986476 chr2 181459602 181460120 + 0.442780220986476 NA promoter-TSS (NM_028125) promoter-TSS (NM_028125) -435 NM_028125 72147 Mm.486504 NM_027656 ENSMUSG00000027583 Zbtb46 2610019F01Rik|4933406L05Rik|BZEL|Btbd4 zinc finger and BTB domain containing 46 protein-coding common_peak1_22_136_-0.159571278867016_7.01824644352702_0.442780220986476 chr17 35163791 35164244 + 0.442780220986476 NA intron (NM_020027, intron 1 of 30) intron (NM_020027, intron 1 of 30) 860 NM_001199044 53761 Mm.272462 NM_020027 ENSMUSG00000024393 Prrc2a 3110039B05Rik|Bat-2|Bat2|D17H6S51E|G2|Wbp12|mKIAA4178 proline-rich coiled-coil 2A protein-coding common_peak1_22_136_-0.159571278867016_7.01824644352702_0.442780220986476-2 chr2 165537681 165538221 + 0.442780220986476 NA Intergenic B3|SINE|B2 34054 NM_130451 170441 Mm.34147 NM_130451 ENSMUSG00000027661 Slc2a10 AA450473|Glut10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding common_peak1_22_136_-0.159571278867016_7.01824644352702_0.442780220986476-3 chr9 108578297 108578672 + 0.442780220986476 NA TTS (NM_028944) TTS (NM_028944) 186 NM_031392 83669 Mm.335454 NM_031392 ENSMUSG00000066357 Wdr6 mWDR6 WD repeat domain 6 protein-coding common_peak2_325_3106_0.0291502289858858_11.6158816406148_0.442752512403533 chr7 19627800 19631062 + 0.442752512403533 NA promoter-TSS (NM_001290457) promoter-TSS (NM_001290457) 7 NM_001290457 19698 Mm.1741 NM_009046 ENSMUSG00000002983 Relb shep avian reticuloendotheliosis viral (v-rel) oncogene related B protein-coding common_peak1_328_3271_-0.0292898362502623_11.6613121148166_0.442679292129928 chr4 150913228 150916013 + 0.442679292129928 NA Intergenic CpG -4699 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak2_100_722_0.0589963566543403_9.52735001527829_0.442517361025282 chr9 95511009 95512818 + 0.442517361025282 NA promoter-TSS (NM_001114977) promoter-TSS (NM_001114977) 83 NM_026476 67958 Mm.292742 NM_026476 ENSMUSG00000032407 U2surp 2610101N10Rik|AU023006|Sr140 U2 snRNP-associated SURP domain containing protein-coding common_peak1_122_924_0.0522682258150358_9.87944366831119_0.442304923605254 chr2 112454491 112455815 + 0.442304923605254 NA exon (NM_133749, exon 1 of 5) exon (NM_133749, exon 1 of 5) 128 NM_133749 73024 Mm.268027 NM_133749 ENSMUSG00000055943 Emc7 2900064A13Rik|AI451465|ORF3|c11orf3 ER membrane protein complex subunit 7 protein-coding common_peak2_45_268_0.0936107527232419_8.11826773891825_0.442301118459597 chr6 71962145 71963784 + 0.442301118459597 NA intron (NM_009088, intron 21 of 33) L2|LINE|L2 53911 NM_009088 20019 Mm.135581 NM_009088 ENSMUSG00000049553 Polr1a 194kDa|3010014K16Rik|RPA194|Rpo1-4|mRPA1 polymerase (RNA) I polypeptide A protein-coding common_peak1_45_268_0.0936107527232419_8.11826773891825_0.442301118459597 chr5 99906112 99906842 + 0.442301118459597 NA Intergenic CpG 72461 NM_001077266 11991 Mm.150231 NM_007516 ENSMUSG00000000568 Hnrnpd Auf1|Hnrpd heterogeneous nuclear ribonucleoprotein D protein-coding unique_peak2_34_189_0.111590106192586_7.62565066142724_0.442159393169236 chr13 63701173 63702510 + 0.442159393169236 NA intron (NR_126476, intron 4 of 4) intron (NR_126476, intron 4 of 4) 32457 NR_126476 75522 Mm.54259 NR_126476 1700024I08Rik - RIKEN cDNA 1700024I08 gene ncRNA common_peak1_34_189_0.111590106192586_7.62565066142724_0.442159393169236 chr4 122836072 122836701 + 0.442159393169236 NA intron (NM_008917, intron 1 of 8) intron (NM_008917, intron 1 of 8) 159 NM_008917 19063 Mm.277719 NM_008917 ENSMUSG00000028657 Ppt1 9530043G02Rik|AA960502|C77813|CLN1|D4Ertd184e|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding common_peak1_34_189_0.111590106192586_7.62565066142724_0.442159393169236-2 chr8 46551408 46551982 + 0.442159393169236 NA promoter-TSS (NM_027973) promoter-TSS (NM_027973) -374 NM_027973 71876 Mm.22108 NM_027973 ENSMUSG00000031629 Cenpu 1700029A22Rik|Mlf1ip centromere protein U protein-coding common_peak2_111_822_0.0550407519690115_9.71226899640613_0.442048844263384 chr2 167688077 167690578 + 0.442048844263384 NA exon (NM_009883, exon 1 of 1) exon (NM_009883, exon 1 of 1) 412 NM_001287738 12608 Mm.439656 NM_009883 ENSMUSG00000056501 Cebpb C/EBPbeta|CRP2|IL-6DBP|LAP|LIP|NF-IL6|NF-M|Nfil6 CCAAT/enhancer binding protein (C/EBP), beta protein-coding common_peak2_80_548_0.0656797439876797_9.13350221099904_0.442005590670073 chr8 105325729 105327166 + 0.442005590670073 NA promoter-TSS (NM_025486) promoter-TSS (NM_025486) 83 NM_025486 66320 Mm.29990 NM_025486 ENSMUSG00000014856 Tmem208 1700006C06Rik|2610030K20Rik|Hspc171 transmembrane protein 208 protein-coding common_peak1_128_981_0.0502824720925403_9.96472045036096_0.441889882312751 chr19 53440351 53441572 + 0.441889882312751 NA TTS (NR_028427) TTS (NR_028427) 23835 NR_028427 381232 Mm.248624 NR_028427 ENSMUSG00000097636 Mirt1 4833407H14Rik|5430437C04Rik|5830416P10Rik|ENSMUSG00000074788|Gm10758 myocardial infarction associated transcript 1 ncRNA common_peak1_258_2447_-0.0340680822157697_11.2403538015848_0.441788357533736 chr6 134034383 134036521 + 0.441788357533736 NA promoter-TSS (NM_007961) promoter-TSS (NM_007961) -248 NM_001303102 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak2_146_1155_0.04608507056329_10.1979682177823_0.441641374547591 chr7 84688897 84690726 + 0.441641374547591 NA non-coding (NR_038175, exon 1 of 5) non-coding (NR_038175, exon 1 of 5) 171 NR_038175 72495 Mm.382914 NR_038175 ENSMUSG00000085236 2610206C17Rik - RIKEN cDNA 2610206C17 gene ncRNA common_peak1_256_2313_0.0334285000491867_11.1928873991321_0.44136016413464 chr18 73814619 73817658 + 0.44136016413464 NA promoter-TSS (NM_145494) promoter-TSS (NM_145494) -746 NM_145494 107029 Mm.36817 NM_145494 ENSMUSG00000024556 Me2 AW120568|D030040L20Rik|NAD-ME malic enzyme 2, NAD(+)-dependent, mitochondrial protein-coding common_peak2_59_421_-0.0858304449231255_8.67818396624562_0.441305934825637 chr11 67544495 67546288 + 0.441305934825637 NA intron (NM_008088, intron 1 of 13) intron (NM_008088, intron 1 of 13) 12393 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding unique_peak2_39_260_-0.110159457752752_7.97282626769351_0.441210851860004 chr10 34029658 34031518 + 0.441210851860004 NA Intergenic Intergenic -7009 NM_001162937 692132 Mm.383415 NM_001162937 ENSMUSG00000071340 Trappc3l Bet3l|ENSMUSG00000071340 trafficking protein particle complex 3 like protein-coding common_peak2_62_399_0.0777529701770572_8.68273267486325_0.440964125570633 chr11 118476325 118477712 + 0.440964125570633 NA promoter-TSS (NM_172573) promoter-TSS (NM_172573) 58 NM_172573 217364 Mm.473963 NM_172573 ENSMUSG00000033857 Engase C130099A03|D230014K01Rik endo-beta-N-acetylglucosaminidase protein-coding common_peak1_125_1024_-0.0531867232546706_9.97481483276547_0.440909638952622 chr4 148038174 148039644 + 0.440909638952622 NA promoter-TSS (NM_011929) promoter-TSS (NM_011929) -96 NM_011929 26372 Mm.89987 NM_011929 ENSMUSG00000029016 Clcn6 AI850629|Clc6 chloride channel, voltage-sensitive 6 protein-coding common_peak2_123_934_0.0510842723320195_9.89436469094101_0.440819995119717 chr8 106934620 106936783 + 0.440819995119717 NA promoter-TSS (NM_009229) promoter-TSS (NM_009229) -49 NM_009229 20650 Mm.30228 NM_009229 ENSMUSG00000041308 Sntb2 Snt2 syntrophin, basic 2 protein-coding common_peak2_101_731_0.0585832500297698_9.54499146329893_0.440811305496373 chr1 85597141 85599675 + 0.440811305496373 NA intron (NM_030194, intron 1 of 11) intron (NM_030194, intron 1 of 11) 402 NM_030194 109032 Mm.335802 NM_030194 ENSMUSG00000070034 Sp110 5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1 Sp110 nuclear body protein protein-coding common_peak1_32_207_-0.123119770480212_7.63887983290099_0.440740238498741 chr10 127671376 127672021 + 0.440740238498741 NA Intergenic B2_Mm2|SINE|B2 4575 NR_045171 72243 Mm.482902 NR_045171 ENSMUSG00000040195 1700012D01Rik - RIKEN cDNA 1700012D01 gene ncRNA common_peak1_32_207_-0.123119770480212_7.63887983290099_0.440740238498741-3 chr2 83721448 83722157 + 0.440740238498741 NA Intergenic Intergenic -2595 NM_008402 16410 Mm.227 NM_008402 ENSMUSG00000027087 Itgav 1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik integrin alpha V protein-coding common_peak2_32_207_-0.123119770480212_7.63887983290099_0.440740238498741-2 chr7 48788820 48789766 + 0.440740238498741 NA intron (NM_028031, intron 1 of 16) CpG 290 NM_028031 243983 Mm.279116 NM_028031 ENSMUSG00000030471 Zdhhc13 2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4 zinc finger, DHHC domain containing 13 protein-coding common_peak2_32_207_-0.123119770480212_7.63887983290099_0.440740238498741 chr7 25212591 25214192 + 0.440740238498741 NA intron (NM_207677, intron 3 of 4) intron (NM_207677, intron 3 of 4) 4334 NR_106015 102466794 NR_106015 ENSMUSG00000098325 Mir7048 Gm27274|mmu-mir-7048 microRNA 7048 ncRNA common_peak1_32_207_-0.123119770480212_7.63887983290099_0.440740238498741-2 chr2 30253657 30254215 + 0.440740238498741 NA intron (NM_177725, intron 2 of 3) intron (NM_177725, intron 2 of 3) -12267 NM_001252568 227696 Mm.297949 NM_172267 ENSMUSG00000079484 Phyhd1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding common_peak2_220_1918_0.0364021798536243_10.9243400861222_0.440732281353434 chr10 61679450 61681407 + 0.440732281353434 NA promoter-TSS (NR_126477) promoter-TSS (NR_126477) 107 NM_009120 20224 Mm.391794 NM_009120 ENSMUSG00000020088 Sar1a 1600019H17Rik|Sara|Sara1 secretion associated Ras related GTPase 1A protein-coding common_peak1_608_6918_-0.0200138855852643_12.746340882724_0.440655085475638 chr15 100664339 100670248 + 0.440655085475638 NA intron (NM_001270537, intron 1 of 10) intron (NM_001270537, intron 1 of 10) 2207 NM_001270537 668218 Mm.451225 NM_001270537 ENSMUSG00000098112 Bin2 - bridging integrator 2 protein-coding common_peak1_112_831_0.0550797800313081_9.72797960815675_0.440551108695514 chr4 126676983 126678511 + 0.440551108695514 NA 5' UTR (NM_011970, exon 1 of 6) 5' UTR (NM_011970, exon 1 of 6) 104 NM_011970 26445 Mm.22233 NM_011970 ENSMUSG00000028837 Psmb2 AU045357|AW108089|C7-I|D4Wsu33e|HC7-I proteasome (prosome, macropain) subunit, beta type 2 protein-coding common_peak2_103_813_-0.0602391172526033_9.63876542563995_0.440536716409267 chr11 33162016 33163896 + 0.440536716409267 NA exon (NM_008722, exon 1 of 11) exon (NM_008722, exon 1 of 11) 250 NM_001252261 18148 Mm.485384 NM_008722 ENSMUSG00000057113 Npm1 B23|NO38|Npm nucleophosmin 1 protein-coding common_peak2_114_917_-0.0557839524419776_9.81445836719282_0.440495073281113 chr2 163016676 163017991 + 0.440495073281113 NA promoter-TSS (NM_172150) promoter-TSS (NM_172150) -139 NM_172150 245866 Mm.34034 NM_172150 ENSMUSG00000017858 Ift52 BC037708|NGD5 intraflagellar transport 52 protein-coding common_peak1_14_83_-0.210273301367413_6.28718077209505_0.440322431956433 chr9 61947776 61948076 + 0.440322431956433 NA Intergenic Intergenic -1127 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding unique_peak2_14_83_-0.210273301367413_6.28718077209505_0.440322431956433-2 chr15 62164529 62165372 + 0.440322431956433 NA intron (NR_003368, intron 4 of 8) intron (NR_003368, intron 4 of 8) 54501 NR_003523 67552 Mm.484027 NM_026230 H2afy3 4933432H23Rik H2A histone family, member Y3 pseudo unique_peak2_14_83_-0.210273301367413_6.28718077209505_0.440322431956433 chr10 88504104 88504541 + 0.440322431956433 NA promoter-TSS (NM_144807) promoter-TSS (NM_144807) -352 NM_001146690 212862 Mm.288897 NM_144807 ENSMUSG00000060002 Chpt1 - choline phosphotransferase 1 protein-coding unique_peak2_47_322_-0.0950025754154726_8.28788906698619_0.440250787272751 chr8 47947079 47948881 + 0.440250787272751 NA intron (NM_133791, intron 1 of 22) intron (NM_133791, intron 1 of 22) 42571 NM_133791 52357 Mm.235074 NM_133791 ENSMUSG00000031563 Wwc2 5330431C14Rik|AU022508|C85457|D8Ertd594e WW, C2 and coiled-coil domain containing 2 protein-coding common_peak2_96_687_0.0590736086613113_9.45580155903275_0.440237539141139 chr12 54733279 54735463 + 0.440237539141139 NA Intergenic MTC|LTR|ERVL-MaLR -38506 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak2_38_217_0.104759124830935_7.82056388719239_0.440210532263677 chr4 134756566 134758021 + 0.440210532263677 NA intron (NM_145554, intron 3 of 8) intron (NM_145554, intron 3 of 8) 10711 NM_145554 100017 Mm.27486 NM_145554 ENSMUSG00000037295 Ldlrap1 AA691260|ARH2|Arh|Arh1|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding common_peak1_38_217_0.104759124830935_7.82056388719239_0.440210532263677 chr11 103027655 103028369 + 0.440210532263677 NA promoter-TSS (NM_008707) promoter-TSS (NM_008707) -550 NM_008707 18107 Mm.10265 NM_008707 ENSMUSG00000020936 Nmt1 AW536594 N-myristoyltransferase 1 protein-coding unique_peak2_38_217_0.104759124830935_7.82056388719239_0.440210532263677 chr1 37028790 37030398 + 0.440210532263677 NA Intergenic Intergenic -90067 NM_018872 56030 Mm.186943 NM_018872 ENSMUSG00000026116 Tmem131 2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257 transmembrane protein 131 protein-coding unique_peak2_38_217_0.104759124830935_7.82056388719239_0.440210532263677-2 chrX 12090292 12092014 + 0.440210532263677 NA intron (NM_001168321, intron 1 of 13) CpG -10600 NM_029510 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak2_51_355_-0.0936998751391105_8.42888349339684_0.440038363413593 chr15 36173290 36174645 + 0.440038363413593 NA promoter-TSS (NM_023127) promoter-TSS (NM_023127) -43 NM_023127 17749 Mm.27375 NM_023127 ENSMUSG00000045996 Polr2k ABC10-alpha|MafY|Mt1a|RPABC4|RPB10alpha|RPB12|RPB7.0 polymerase (RNA) II (DNA directed) polypeptide K protein-coding common_peak2_120_975_-0.0541704929274385_9.90365209109917_0.439943928589849 chr19 46598934 46600449 + 0.439943928589849 NA intron (NM_146099, intron 1 of 3) intron (NM_146099, intron 1 of 3) 585 NM_146099 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_120_975_-0.0541704929274385_9.90365209109917_0.439943928589849 chr2 43738057 43739751 + 0.439943928589849 NA Intergenic Intergenic -9920 NM_001301832 76117 Mm.217350 NM_153820 ENSMUSG00000049744 Arhgap15 5830480G12Rik Rho GTPase activating protein 15 protein-coding common_peak1_86_599_0.0639791401699714_9.26080826058087_0.439902948143383 chr11 117598733 117599994 + 0.439902948143383 NA Intergenic Intergenic -11884 NR_015489 78403 Mm.212543 NR_015489 2900041M22Rik - RIKEN cDNA 2900041M22 gene ncRNA common_peak1_182_1606_-0.041500246474838_10.6294040904377_0.439879998996596 chr3 121290987 121292547 + 0.439879998996596 NA promoter-TSS (NM_024178) promoter-TSS (NM_024178) -50 NM_024178 66789 Mm.269881 NM_024178 ENSMUSG00000039887 Alg14 5430428G01Rik|AI854024 asparagine-linked glycosylation 14 protein-coding common_peak2_78_584_-0.0701937233574501_9.15719595279204_0.439781192491715 chr7 30169062 30170659 + 0.439781192491715 NA promoter-TSS (NM_011980) promoter-TSS (NM_011980) -62 NM_001033540 330503 Mm.434058 NM_001033540 ENSMUSG00000066647 Gm5113 B430201F14|EG330503 predicted gene 5113 protein-coding common_peak1_78_584_-0.0701937233574501_9.15719595279204_0.439781192491715 chr4 62359623 62360509 + 0.439781192491715 NA promoter-TSS (NM_175090) promoter-TSS (NM_175090) 482 NM_001045528 338355 Mm.357792 NM_001045528 ENSMUSG00000066151 Fkbp15 BB131447|C430014M02Rik|FKBO133|FKBP-133|FKBP-15|FKBP133|mKIAA0674 FK506 binding protein 15 protein-coding common_peak1_109_869_-0.0569682611638189_9.73638746015418_0.439732700539432 chr9 73039089 73040573 + 0.439732700539432 NA promoter-TSS (NM_018889) promoter-TSS (NM_018889) 113 NM_001308425 66364 Mm.392089 NM_001308425 2310009A05Rik 5031420N21Rik RIKEN cDNA 2310009A05 gene protein-coding common_peak1_58_368_0.0780493989814293_8.56650170555111_0.439702852054124 chr6 52965072 52965850 + 0.439702852054124 NA intron (NM_173406, intron 1 of 4) intron (NM_173406, intron 1 of 4) -55841 NM_001168277 231986 Mm.386865 NM_173406 ENSMUSG00000063568 Jazf1 AI591476|C820002C15|Jaz1|Tip27 JAZF zinc finger 1 protein-coding common_peak2_88_674_-0.0657253231740054_9.36588103035119_0.439495155352992 chr19 29371199 29373050 + 0.439495155352992 NA intron (NM_021893, intron 1 of 6) intron (NM_021893, intron 1 of 6) 4686 NM_021893 60533 Mm.245363 NM_021893 ENSMUSG00000016496 Cd274 A530045L16Rik|B7h1|Pdcd1l1|Pdcd1lg1|Pdl1 CD274 antigen protein-coding common_peak1_31_169_0.113474638173822_7.46612825522461_0.439479976613475 chr19 46041604 46042211 + 0.439479976613475 NA intron (NM_001113408, intron 1 of 10) intron (NM_001113408, intron 1 of 10) -2286 NM_010697 16825 Mm.327442 NM_010697 ENSMUSG00000025223 Ldb1 CLIM2|NLI LIM domain binding 1 protein-coding common_peak1_31_169_0.113474638173822_7.46612825522461_0.439479976613475-2 chr7 75574847 75575491 + 0.439479976613475 NA intron (NM_029332, intron 3 of 36) intron (NM_029332, intron 3 of 36) 119635 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak1_83_629_-0.0685087522160686_9.26495364227925_0.439451250622273 chr9 62980070 62980914 + 0.439451250622273 NA intron (NM_019663, intron 1 of 13) CpG 387 NM_019663 56469 Mm.431253 NM_019663 ENSMUSG00000032405 Pias1 2900068C24Rik|Ddxbp1|GBP protein inhibitor of activated STAT 1 protein-coding common_peak1_67_440_0.0721260377893618_8.8206978644522_0.43940555756158 chr6 30401343 30402481 + 0.43940555756158 NA promoter-TSS (NM_029742) promoter-TSS (NM_029742) 57 NM_001311087 76788 Mm.277308 NM_029742 ENSMUSG00000029775 Klhdc10 2410127E18Rik|AI593221|mKIAA0265 kelch domain containing 10 protein-coding common_peak1_167_1364_0.0426263415503527_10.4359984065824_0.439319674906973 chr9 110116728 110118237 + 0.439319674906973 NA 5' UTR (NM_001252682, exon 1 of 23) 5' UTR (NM_001252682, exon 1 of 23) 134 NM_001252682 72831 Mm.276305 NM_133347 ENSMUSG00000032480 Dhx30 2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR DEAH (Asp-Glu-Ala-His) box polypeptide 30 protein-coding common_peak2_54_336_0.0846862372040569_8.43894789978389_0.439235759861488 chr1 177983087 177984291 + 0.439235759861488 NA Intergenic CpG -7746 NM_001034899 545391 Mm.442974 NM_001034899 ENSMUSG00000091476 Gm16432 EG545391|EG666250 predicted gene 16432 protein-coding common_peak2_187_1569_0.0398068660197417_10.6364522767889_0.439181994454787 chr16 70313298 70315310 + 0.439181994454787 NA intron (NM_028803, intron 1 of 15) CpG 355 NM_028803 74185 Mm.396102 NM_028803 ENSMUSG00000022707 Gbe1 2310045H19Rik|2810426P10Rik|D16Ertd536e glucan (1,4-alpha-), branching enzyme 1 protein-coding common_peak1_115_927_-0.0560930582422916_9.82993446600643_0.438962310693926 chr4 141860694 141862057 + 0.438962310693926 NA intron (NM_025994, intron 2 of 3) B2_Mm2|SINE|B2 13545 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_29_185_-0.130502378510328_7.47390762185287_0.438699510683042 chr1 43128862 43129367 + 0.438699510683042 NA intron (NM_001289533, intron 4 of 5) intron (NM_001289533, intron 4 of 5) 30404 NM_133818 98404 Mm.28817 NM_133818 ENSMUSG00000010290 AI597479 - expressed sequence AI597479 protein-coding common_peak1_72_481_0.0694296901556672_8.9476041813078_0.4385492878332 chr4 83321311 83322678 + 0.4385492878332 NA intron (NM_027238, intron 1 of 19) intron (NM_027238, intron 1 of 19) 2195 NM_027238 69863 Mm.5540 NM_025782 ENSMUSG00000038172 Ttc39b 1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585 tetratricopeptide repeat domain 39B protein-coding common_peak1_72_481_0.0694296901556672_8.9476041813078_0.4385492878332-2 chr9 77750113 77751388 + 0.4385492878332 NA Intergenic CpG -3785 NM_010295 14629 Mm.89888 NM_010295 ENSMUSG00000032350 Gclc D9Wsu168e|GLCL-H|Ggcs-hs|Glclc glutamate-cysteine ligase, catalytic subunit protein-coding common_peak1_36_237_-0.115034112096533_7.83730070725968_0.438382367461768 chr1 43138780 43139221 + 0.438382367461768 NA intron (NM_001289533, intron 3 of 5) B1_Mm|SINE|Alu 24961 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak2_92_652_0.0598775393411586_9.38087795121701_0.438040676895115-2 chr8 109736857 109738376 + 0.438040676895115 NA intron (NM_001080930, intron 1 of 3) CpG 123 NM_001080930 52335 Mm.276770 NM_001080930 ENSMUSG00000069895 Atxn1l AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e|ENSMUSG00000069895 ataxin 1-like protein-coding common_peak2_92_652_0.0598775393411586_9.38087795121701_0.438040676895115 chr17 73300141 73302483 + 0.438040676895115 NA Intergenic MIRb|SINE|MIR 97984 NM_001033444 381122 Mm.81496 NM_001033444 ENSMUSG00000043705 Capn13 CANP 13|Gm943 calpain 13 protein-coding common_peak2_264_2515_-0.0330688545578539_11.2803817796004_0.437939552253453 chr6 134034189 134036896 + 0.437939552253453 NA promoter-TSS (NM_007961) promoter-TSS (NM_007961) -158 NM_001303102 14011 Mm.269995 NM_007961 ENSMUSG00000030199 Etv6 AW123102|AW557856|Tel ets variant 6 protein-coding common_peak2_381_3921_-0.0263900030189994_11.9241788186827_0.437936308944568 chr10 115313598 115316479 + 0.437936308944568 NA intron (NM_024454, intron 1 of 6) intron (NM_024454, intron 1 of 6) 553 NM_024454 216344 Mm.21936 NM_024454 ENSMUSG00000020132 Rab21 9630024B22 RAB21, member RAS oncogene family protein-coding common_peak2_56_395_-0.0848579005294372_8.58692766981489_0.437896718492414 chr17 78915930 78917263 + 0.437896718492414 NA promoter-TSS (NM_001177403) promoter-TSS (NM_001177403) 97 NM_001177402 68554 Mm.391820 NM_001177402 ENSMUSG00000062691 Cebpzos 1110001A16Rik CCAAT/enhancer binding protein (C/EBP), zeta, opposite strand protein-coding common_peak1_87_608_0.0627239471603307_9.2816603914865_0.437893190499594 chr5 136146231 136147847 + 0.437893190499594 NA TTS (NM_178751) TTS (NM_178751) 8258 NM_028070 72041 Mm.486605 NM_028070 ENSMUSG00000039754 Alkbh4 2010004B12Rik|Abj4 alkB homolog 4, lysine demethylase protein-coding common_peak2_87_608_0.0627239471603307_9.2816603914865_0.437893190499594 chr3 95105867 95107538 + 0.437893190499594 NA 5' UTR (NM_001293707, exon 1 of 15) 5' UTR (NM_001293707, exon 1 of 15) 228 NM_001293707 18720 Mm.296409 NM_008847 ENSMUSG00000028126 Pip5k1a PI4P5K-I[a]|PIP5K1-alpha|PIP5KIalpha|Pipk5a phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha protein-coding common_peak2_378_3745_0.0258961756449612_11.8840832720655_0.437801046313257 chr6 113074915 113079280 + 0.437801046313257 NA promoter-TSS (NM_028385) promoter-TSS (NM_028385) 147 NR_027010 14910 Mm.280950 NR_027008 ENSMUSG00000086429 Gt(ROSA)26Sor AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26|Thumpd3as1 gene trap ROSA 26, Philippe Soriano ncRNA common_peak2_89_683_-0.0650615661349097_9.38532173181844_0.437630707691408 chr2 79086647 79088123 + 0.437630707691408 NA Intergenic Intergenic -168041 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak1_79_593_-0.069960270797278_9.17933898540213_0.437625905980061 chr13 62466314 62467386 + 0.437625905980061 NA promoter-TSS (NM_178875) promoter-TSS (NM_178875) -38 NM_001136496 71508 Mm.442497 NM_178875 ENSMUSG00000055228 Zfp935 8430426H19Rik|Es113 zinc finger protein 935 protein-coding common_peak2_114_850_0.0535510692858665_9.7597908563289_0.437491414266874 chr15 5512263 5515284 + 0.437491414266874 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 17455 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak1_28_149_0.119844624016688_7.28874100250422_0.437488820345905 chr11 117828298 117828773 + 0.437488820345905 NA intron (NM_027827, intron 2 of 10) URR1B|DNA|hAT-Charlie -2521 NM_009387 21877 Mm.2661 NM_009387 ENSMUSG00000025574 Tk1 D530002A18Rik|Tk-1|Tk1a|Tk1b thymidine kinase 1 protein-coding common_peak1_26_163_-0.135344437778489_7.28987978572884_0.437488820345905 chr7 49601861 49602548 + 0.437488820345905 NA intron (NM_001111016, intron 37 of 38) intron (NM_001111016, intron 37 of 38) 34631 NM_001005232 13172 Mm.307176 NM_001005232 ENSMUSG00000030507 Dbx1 AI426026|Dbx developing brain homeobox 1 protein-coding common_peak1_28_149_0.119844624016688_7.28874100250422_0.437488820345905-2 chr2 59882027 59882578 + 0.437488820345905 NA intron (NM_028118, intron 1 of 10) CpG 304 NM_001159636 72137 Mm.288734 NM_028118 ENSMUSG00000026988 Wdsub1 1700048E19Rik|2610014F08Rik WD repeat, SAM and U-box domain containing 1 protein-coding common_peak1_28_149_0.119844624016688_7.28874100250422_0.437488820345905-3 chr4 75277959 75278326 + 0.437488820345905 NA exon (NM_025849, exon 1 of 2) exon (NM_025849, exon 1 of 2) 144 NM_025849 66928 Mm.24332 NM_025849 ENSMUSG00000028398 Tmem261 1700027K24Rik|3110001D03Rik transmembrane protein 261 protein-coding common_peak1_11_47_0.202200656184583_5.68606282881345_0.437419278836636 chr3 69463850 69464162 + 0.437419278836636 NA intron (NM_178726, intron 1 of 3) intron (NM_178726, intron 1 of 3) 134954 NM_020026 26879 Mm.153710 NM_020026 ENSMUSG00000043300 B3galnt1 B3galt3|b3GT3 UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1 protein-coding unique_peak2_35_196_0.109245853602647_7.6766747462577_0.437314188661967 chr8 119832192 119833745 + 0.437314188661967 NA intron (NM_028071, intron 2 of 3) intron (NM_028071, intron 2 of 3) 7611 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak2_270_2471_0.032004505443032_11.2874652806259_0.437282095825834 chr2 168205171 168208105 + 0.437282095825834 NA 5' UTR (NM_009628, exon 1 of 4) 5' UTR (NM_009628, exon 1 of 4) 474 NM_009628 11538 Mm.201322 NM_009628 ENSMUSG00000051149 Adnp AA589558|mKIAA0784 activity-dependent neuroprotective protein protein-coding common_peak2_52_362_-0.0880839725526386_8.45978375171943_0.437269227954296 chr7 140115748 140117197 + 0.437269227954296 NA promoter-TSS (NM_053119) promoter-TSS (NM_053119) -49 NM_053119 93747 Mm.24452 NM_053119 ENSMUSG00000025465 Echs1 C80529 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial protein-coding common_peak1_17_102_-0.181815165310551_6.59559294452794_0.437242741247067 chr7 66079146 66079517 + 0.437242741247067 NA promoter-TSS (NM_024439) promoter-TSS (NM_024439) -318 NM_024439 109815 Mm.482127 NM_024439 ENSMUSG00000075701 Selenos 1500011E07Rik|C78786|H-4|H-47|H4|H47|Sels|Vimp selenoprotein S protein-coding common_peak2_17_102_-0.181815165310551_6.59559294452794_0.437242741247067 chr15 102097253 102098073 + 0.437242741247067 NA TTS (NM_145625) TTS (NM_145625) -5325 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding unique_peak2_17_102_-0.181815165310551_6.59559294452794_0.437242741247067-2 chr16 26581612 26582383 + 0.437242741247067 NA intron (NM_134103, intron 1 of 7) MIR3|SINE|MIR 292 NM_008364 16180 Mm.253424 NM_008364 ENSMUSG00000022514 Il1rap 6430709H04Rik|AI255955|AV239853|IL-1RAcP interleukin 1 receptor accessory protein protein-coding common_peak1_17_102_-0.181815165310551_6.59559294452794_0.437242741247067-2 chr7 125607675 125608161 + 0.437242741247067 NA intron (NM_021887, intron 1 of 8) intron (NM_021887, intron 1 of 8) 4489 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding unique_peak2_17_102_-0.181815165310551_6.59559294452794_0.437242741247067 chr1 164053208 164054263 + 0.437242741247067 NA intron (NM_011345, intron 9 of 13) intron (NM_011345, intron 9 of 13) 5501 NM_011345 20339 Mm.5245 NM_011345 ENSMUSG00000026582 Sele CD62E|E-selectin|ELAM-1|Elam|LECAM2 selectin, endothelial cell protein-coding unique_peak2_17_102_-0.181815165310551_6.59559294452794_0.437242741247067-3 chr3 94309703 94310724 + 0.437242741247067 NA promoter-TSS (NM_029431) promoter-TSS (NM_029431) 81 NM_029431 75778 Mm.45092 NM_029431 ENSMUSG00000028145 Them4 2700077M13Rik|4921507I02Rik thioesterase superfamily member 4 protein-coding common_peak2_122_994_-0.0529749342123012_9.93206524832486_0.43724075383585 chr2 43737932 43739777 + 0.43724075383585 NA Intergenic Intergenic -9970 NM_001301832 76117 Mm.217350 NM_153820 ENSMUSG00000049744 Arhgap15 5830480G12Rik Rho GTPase activating protein 15 protein-coding common_peak1_68_448_0.0720236855056484_8.84658347749397_0.436998475073535 chr11 87086298 87087205 + 0.436998475073535 NA promoter-TSS (NM_024262) promoter-TSS (NM_024262) 26 NM_024262 74133 Mm.23257 NM_024262 ENSMUSG00000020495 Smg8 1200011M11Rik smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak2_192_1713_-0.0403461016662412_10.7229783432794_0.436976074650542 chr3 108145054 108146804 + 0.436976074650542 NA exon (NM_010306, exon 1 of 9) exon (NM_010306, exon 1 of 9) 223 NM_010306 14679 Mm.271703 NM_010306 ENSMUSG00000000001 Gnai3 AI158965|AW537698|Galphai3|Gnai-3 guanine nucleotide binding protein (G protein), alpha inhibiting 3 protein-coding common_peak1_44_298_-0.0978230366334731_8.17509015588137_0.436912710981821 chr1 191325881 191326560 + 0.436912710981821 NA intron (NM_025864, intron 1 of 7) CpG 255 NM_025864 66950 Mm.236300 NM_025864 ENSMUSG00000026627 Tmem206 2310028N02Rik|AI118576 transmembrane protein 206 protein-coding common_peak1_16_75_0.155608747530587_6.32573188720888_0.436835517045436-2 chr12 28675054 28675451 + 0.436835517045436 NA promoter-TSS (NM_134052) promoter-TSS (NM_134052) 45 NM_134052 104923 Mm.291504 NM_134052 ENSMUSG00000020629 Adi1 AL024210|Fe-ARD|MTCBP-1|Ni-ARD acireductone dioxygenase 1 protein-coding unique_peak2_16_75_0.155608747530587_6.32573188720888_0.436835517045436-2 chr7 75910250 75910939 + 0.436835517045436 NA Intergenic Intergenic 62256 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding unique_peak1_16_75_0.155608747530587_6.32573188720888_0.436835517045436 chr8 83442034 83442464 + 0.436835517045436 NA intron (NM_001039137, intron 1 of 3) CpG 413 NM_001285992 56367 Mm.246911 NM_019708 ENSMUSG00000063253 Scoc 0610011C06Rik|2810002J11Rik|AA415030|SCOCO short coiled-coil protein protein-coding unique_peak2_16_75_0.155608747530587_6.32573188720888_0.436835517045436 chr19 58104079 58104705 + 0.436835517045436 NA intron (NM_181415, intron 28 of 28) intron (NM_181415, intron 28 of 28) 53225 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA common_peak1_16_75_0.155608747530587_6.32573188720888_0.436835517045436 chr11 70649763 70650161 + 0.436835517045436 NA exon (NM_001316728, exon 7 of 10) exon (NM_001316728, exon 7 of 10) 2675 NM_027445 70510 Mm.261818 NM_027445 ENSMUSG00000040746 Rnf167 0610010G05Rik|5730408C10Rik|AU019305|AV328608 ring finger protein 167 protein-coding common_peak1_16_75_0.155608747530587_6.32573188720888_0.436835517045436-3 chr16 11503139 11503498 + 0.436835517045436 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 97670 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak2_59_376_0.0768480305153965_8.59684472852636_0.43683544915474 chr11 96310727 96312342 + 0.43683544915474 NA Intergenic CT-rich|Low_complexity|Low_complexity -4624 NR_131758 75395 Mm.440014 NR_131758 ENSMUSG00000085645 Hoxb5os 0610040B09Rik|AV302770|Hoxb5/6as homeobox B5 and homeobox B6, opposite strand ncRNA common_peak1_59_376_0.0768480305153965_8.59684472852636_0.43683544915474 chr8 4275363 4276542 + 0.43683544915474 NA promoter-TSS (NM_011592) promoter-TSS (NM_011592) -47 NM_011592 21856 Mm.195249 NM_011592 ENSMUSG00000002949 Timm44 0710005E20Rik|D8Ertd118e|Mimt44|Tim44 translocase of inner mitochondrial membrane 44 protein-coding common_peak2_111_888_-0.0562502364391317_9.7679144906102_0.436708409250433 chrX 105927977 105929956 + 0.436708409250433 NA intron (NM_009530, intron 1 of 34) CpG 406 NM_009530 22589 Mm.10141 NM_009530 ENSMUSG00000031229 Atrx 4833408C14Rik|AI447451|ATR2|DXHXS6677E|HP1-BP38|Hp1bp2|Hp1bp38|MRXS3|RAD54L|Rad54|XH2|Xnp|ZNF-HX alpha thalassemia/mental retardation syndrome X-linked protein-coding common_peak1_23_142_-0.146095868686294_7.08682340243524_0.436498524636116 chr11 98001599 98002097 + 0.436498524636116 NA 3' UTR (NM_001282977, exon 14 of 14) 3' UTR (NM_001282977, exon 14 of 14) -5675 NM_207231 217151 Mm.277896 NM_207231 ENSMUSG00000038352 Arl5c Arl12|BC065791 ADP-ribosylation factor-like 5C protein-coding unique_peak2_23_142_-0.146095868686294_7.08682340243524_0.436498524636116 chr15 10046180 10047139 + 0.436498524636116 NA Intergenic L1Md_F2|LINE|L1 -130579 NM_011169 19116 Mm.10516 NM_011169 ENSMUSG00000005268 Prlr AI987712|Pr-1|Pr-3|Prlr-rs1 prolactin receptor protein-coding common_peak1_23_142_-0.146095868686294_7.08682340243524_0.436498524636116-2 chr2 30982372 30982838 + 0.436498524636116 NA promoter-TSS (NM_144885) promoter-TSS (NM_144885) 326 NM_028846 74270 Mm.346654 NM_028846 ENSMUSG00000026854 Usp20 1700055M05Rik|AI467231|Vdu2 ubiquitin specific peptidase 20 protein-coding common_peak2_23_142_-0.146095868686294_7.08682340243524_0.436498524636116 chr8 111991778 111992532 + 0.436498524636116 NA intron (NM_013925, intron 1 of 9) CpG 147 NM_013925 30947 Mm.282162 NM_013925 ENSMUSG00000031949 Adat1 MMADAT1|mADAT1 adenosine deaminase, tRNA-specific 1 protein-coding common_peak1_23_142_-0.146095868686294_7.08682340243524_0.436498524636116-3 chr2 32961209 32961623 + 0.436498524636116 NA promoter-TSS (NM_199302) promoter-TSS (NM_199302) -161 NM_199302 227738 Mm.248037 NM_199302 ENSMUSG00000026792 Lrsam1 - leucine rich repeat and sterile alpha motif containing 1 protein-coding common_peak2_117_946_-0.0550818992402036_9.85967966584828_0.436140987088845 chr2 32259002 32260872 + 0.436140987088845 NA exon (NM_011675, exon 1 of 7) exon (NM_011675, exon 1 of 7) 168 NM_011675 22245 Mm.425076 NM_011675 ENSMUSG00000002550 Uck1 URK1|Umpk uridine-cytidine kinase 1 protein-coding common_peak1_55_344_0.0827245095387497_8.47181480643491_0.436115947851955 chr6 113325933 113326835 + 0.436115947851955 NA promoter-TSS (NM_010957) promoter-TSS (NM_010957) -592 NM_010957 18294 Mm.43612 NM_010957 ENSMUSG00000030271 Ogg1 Mmh 8-oxoguanine DNA-glycosylase 1 protein-coding common_peak2_78_531_0.0668166556121275_9.08869076330725_0.435961530071308 chr13 67268498 67269796 + 0.435961530071308 NA promoter-TSS (NM_001001152) promoter-TSS (NM_001001152) -79 NM_001001152 238690 Mm.306358 NM_001001152 ENSMUSG00000055480 Zfp458 BC062958|Rslcan-7|Znf728|mszf59-2 zinc finger protein 458 protein-coding common_peak2_78_531_0.0668166556121275_9.08869076330725_0.435961530071308-2 chr8 94857267 94858266 + 0.435961530071308 NA exon (NM_009090, exon 2 of 9) exon (NM_009090, exon 2 of 9) 316 NM_009090 20021 Mm.292492 NM_009090 ENSMUSG00000031783 Polr2c 33kDa|RPB3|Rpo2-3|mRBP31 polymerase (RNA) II (DNA directed) polypeptide C protein-coding common_peak2_151_1205_0.0441869450558734_10.258107664428_0.43589929531864 chr5 24029543 24031575 + 0.43589929531864 NA promoter-TSS (NM_001310471) promoter-TSS (NM_001310471) 131 NM_053090 84652 Mm.304976 NM_053090 ENSMUSG00000028995 Fam126a AB030242|Drctnnb1a family with sequence similarity 126, member A protein-coding unique_peak2_20_122_-0.165039861540742_6.85999457456887_0.435871204742955 chr3 107040730 107041739 + 0.435871204742955 NA intron (NR_033498, intron 1 of 1) intron (NR_033498, intron 1 of 1) 1730 NR_033498 229694 Mm.347584 NM_173787 ENSMUSG00000056145 AI504432 A230102G19 expressed sequence AI504432 ncRNA common_peak1_20_122_-0.165039861540742_6.85999457456887_0.435871204742955-4 chr9 105130786 105131360 + 0.435871204742955 NA intron (NM_029385, intron 2 of 2) intron (NM_029385, intron 2 of 2) 732 NM_029385 75686 Mm.305810 NM_029385 ENSMUSG00000032565 Nudt16 2310041H06Rik|2810047L04Rik|2900006H04Rik|AI851783 nudix (nucleoside diphosphate linked moiety X)-type motif 16 protein-coding common_peak1_20_122_-0.165039861540742_6.85999457456887_0.435871204742955 chr13 52995040 52995474 + 0.435871204742955 NA Intergenic AT_rich|Low_complexity|Low_complexity -14218 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_20_122_-0.165039861540742_6.85999457456887_0.435871204742955-2 chr2 144300002 144300474 + 0.435871204742955 NA Intergenic Intergenic 29334 NM_001289630 74528 Mm.386817 NM_028984 ENSMUSG00000027424 Mgme1 8430406I07Rik|AI426476 mitochondrial genome maintainance exonuclease 1 protein-coding common_peak1_20_122_-0.165039861540742_6.85999457456887_0.435871204742955-3 chr7 38189121 38189667 + 0.435871204742955 NA intron (NM_001085385, intron 2 of 3) MTD|LTR|ERVL-MaLR 5607 NM_028166 72244 Mm.187554 NM_028166 1600014C10Rik AI428873 RIKEN cDNA 1600014C10 gene protein-coding common_peak2_20_122_-0.165039861540742_6.85999457456887_0.435871204742955 chr14 121710791 121711695 + 0.435871204742955 NA intron (NM_134074, intron 1 of 52) PB1D7|SINE|Alu -12826 NM_001081039 105445 Mm.378591 NM_134074 ENSMUSG00000025558 Dock9 AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058 dedicator of cytokinesis 9 protein-coding common_peak1_19_92_0.151975416522745_6.6151465193694_0.435844194873109-3 chr8 81497208 81497623 + 0.435844194873109 NA intron (NM_001297591, intron 2 of 24) Lx3A|LINE|L1 154853 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding common_peak1_19_92_0.151975416522745_6.6151465193694_0.435844194873109-2 chr6 48395487 48396018 + 0.435844194873109 NA 5' UTR (NM_133922, exon 1 of 18) 5' UTR (NM_133922, exon 1 of 18) 166 NM_133922 77827 Mm.107646 NM_133922 ENSMUSG00000042810 Krba1 A930040G15Rik|AI448780 KRAB-A domain containing 1 protein-coding unique_peak2_19_92_0.151975416522745_6.6151465193694_0.435844194873109 chr17 71193059 71194039 + 0.435844194873109 NA intron (NM_022882, intron 1 of 19) AT_rich|Low_complexity|Low_complexity 9571 NM_022882 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding unique_peak2_19_92_0.151975416522745_6.6151465193694_0.435844194873109-2 chr9 73060922 73061707 + 0.435844194873109 NA intron (NM_001301230, intron 2 of 6) L1M3|LINE|L1 -2834 NM_001301232 11891 Mm.34867 NM_023635 ENSMUSG00000032202 Rab27a 2210402C08Rik|2410003M20Rik|4933437C11Rik|ash RAB27A, member RAS oncogene family protein-coding common_peak1_19_92_0.151975416522745_6.6151465193694_0.435844194873109 chr15 73176207 73176663 + 0.435844194873109 NA intron (NM_153178, intron 1 of 18) B1_Mus1|SINE|Alu 8512 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak2_173_1511_-0.0428322823688632_10.5408262830366_0.435813208832227 chr9 70542007 70543804 + 0.435813208832227 NA promoter-TSS (NM_025690) promoter-TSS (NM_025690) 35 NM_025690 66660 Mm.22379 NM_025690 ENSMUSG00000032212 Sltm 5730455C01Rik|5730555F13Rik|9130215G10Rik|Met SAFB-like, transcription modulator protein-coding common_peak1_467_4862_0.0226717118951587_12.2589667321863_0.435812464262652 chr10 127140234 127143708 + 0.435812464262652 NA Intergenic Intergenic -20811 NM_001171026 216440 Mm.295246 NM_177614 ENSMUSG00000040462 Os9 4632413K17Rik|AU022351 amplified in osteosarcoma protein-coding common_peak2_129_1063_-0.0517556039819365_10.0294046335102_0.435688723950183 chr4 148037915 148039889 + 0.435688723950183 NA promoter-TSS (NM_011929) promoter-TSS (NM_011929) -89 NM_011929 26372 Mm.89987 NM_011929 ENSMUSG00000029016 Clcn6 AI850629|Clc6 chloride channel, voltage-sensitive 6 protein-coding common_peak2_25_130_0.121998243103482_7.09442212308919_0.435505327196993 chr19 18623153 18624399 + 0.435505327196993 NA intron (NM_017375, intron 1 of 9) intron (NM_017375, intron 1 of 9) 8037 NM_017375 20409 Mm.172222 NM_017375 ENSMUSG00000024725 Ostf1 C78236|SH3P2|Sh3d3 osteoclast stimulating factor 1 protein-coding common_peak1_25_130_0.121998243103482_7.09442212308919_0.435505327196993 chr10 61382771 61383267 + 0.435505327196993 NA intron (NM_013753, intron 1 of 19) intron (NM_013753, intron 1 of 19) 504 NM_013753 27355 Mm.269699 NM_013753 ENSMUSG00000020092 Pald1 MMPAL|Pald|mKIAA1274 phosphatase domain containing, paladin 1 protein-coding common_peak1_39_225_0.0975675764019446_7.86896275061616_0.435439888689566 chr8 104631600 104632187 + 0.435439888689566 NA promoter-TSS (NM_019662) promoter-TSS (NM_019662) -572 NM_019662 56437 Mm.29467 NM_019662 ENSMUSG00000031880 Rrad REM3|Rad Ras-related associated with diabetes protein-coding unique_peak2_39_225_0.0975675764019446_7.86896275061616_0.435439888689566 chr11 68501824 68503614 + 0.435439888689566 NA promoter-TSS (NM_001004435) promoter-TSS (NM_001004435) -300 NM_001004435 104709 Mm.234573 NM_001004435 ENSMUSG00000046207 Pik3r6 BB220380|p84|p84 PIKAP|p87(PIKAP)|p87PIKAP phosphoinositide-3-kinase, regulatory subunit 6 protein-coding unique_peak2_12_70_-0.220938186050105_6.03927802647963_0.4354024333952 chr10 39481157 39481762 + 0.4354024333952 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 111660 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding unique_peak2_12_70_-0.220938186050105_6.03927802647963_0.4354024333952-3 chr8 117042899 117043628 + 0.4354024333952 NA exon (NM_029686, exon 21 of 43) exon (NM_029686, exon 21 of 43) 39186 NM_029686 76645 Mm.159753 NM_029686 ENSMUSG00000034416 Pkd1l2 1700126L06Rik polycystic kidney disease 1 like 2 protein-coding unique_peak2_12_70_-0.220938186050105_6.03927802647963_0.4354024333952-4 chr9 44733415 44734037 + 0.4354024333952 NA intron (NM_153537, intron 1 of 21) CpG 1472 NM_153537 102693 Mm.28639 NM_153537 ENSMUSG00000048537 Phldb1 AU041016|D330037A14Rik|Ll5a pleckstrin homology like domain, family B, member 1 protein-coding common_peak1_12_70_-0.220938186050105_6.03927802647963_0.4354024333952 chr13 90931704 90932057 + 0.4354024333952 NA Intergenic Intergenic 8758 NM_024175 66475 Mm.306302 NM_024175 ENSMUSG00000049517 Rps23 2410044J15Rik ribosomal protein S23 protein-coding unique_peak2_12_70_-0.220938186050105_6.03927802647963_0.4354024333952-2 chr3 86142812 86143356 + 0.4354024333952 NA promoter-TSS (NM_016959) promoter-TSS (NM_016959) -416 NM_016959 20091 Mm.391785 NM_016959 ENSMUSG00000028081 Rps3a1 Rps3a ribosomal protein S3A1 protein-coding common_peak2_112_897_-0.0550521365687455_9.78304556645677_0.435321413874792 chr7 132734607 132737788 + 0.435321413874792 NA intron (NM_175268, intron 4 of 4) intron (NM_175268, intron 4 of 4) 50738 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_201_1810_-0.0391103261583563_10.803015667871_0.435284708680247 chrX 77794829 77796911 + 0.435284708680247 NA promoter-TSS (NM_016979) promoter-TSS (NM_016979) 90 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding common_peak2_57_403_-0.0829358570528704_8.61674355422536_0.435102778903424 chr11 64203563 64205271 + 0.435102778903424 NA Intergenic Intergenic 124933 NR_033780 66456 Mm.124828 NR_033780 ENSMUSG00000087497 2810001G20Rik AW045514 RIKEN cDNA 2810001G20 gene ncRNA common_peak2_57_403_-0.0829358570528704_8.61674355422536_0.435102778903424-2 chr19 8735190 8736556 + 0.435102778903424 NA promoter-TSS (NM_134139) promoter-TSS (NM_134139) 34 NM_134139 107071 Mm.29627 NM_134139 ENSMUSG00000042729 Wdr74 5730436H21Rik|AA407588 WD repeat domain 74 protein-coding common_peak2_57_403_-0.0829358570528704_8.61674355422536_0.435102778903424-3 chrX 36807114 36808556 + 0.435102778903424 NA Intergenic CpG 9365 NR_131979 69591 Mm.482947 NR_131979 ENSMUSG00000097468 Mdrl 2310010G23Rik mitochondrial dynamic related lncRNA ncRNA common_peak1_47_283_0.0906406597737703_8.19506744939157_0.435053827450936 chr6 86606285 86607174 + 0.435053827450936 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -21445 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak2_110_814_0.053261918246255_9.69728720824157_0.434989362204677 chr10 63337935 63339918 + 0.434989362204677 NA exon (NM_001159589, exon 1 of 8) exon (NM_001159589, exon 1 of 8) 109 NM_019812 93759 Mm.351459 NM_019812 ENSMUSG00000020063 Sirt1 AA673258|SIR2L1|Sir2|Sir2a|Sir2alpha sirtuin 1 protein-coding common_peak1_66_479_-0.0763468954587943_8.86871714787912_0.434959951476714 chr15 86050902 86052146 + 0.434959951476714 NA Intergenic Intergenic -6171 NM_172611 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_174_1521_-0.0422013421016914_10.5506519724527_0.434914292647504 chr11 60219298 60221132 + 0.434914292647504 NA intron (NM_011480, intron 1 of 18) intron (NM_011480, intron 1 of 18) 412 NM_011480 20787 Mm.278701 NM_011480 ENSMUSG00000020538 Srebf1 ADD1|SREBP-1a|SREBP1|SREBP1c|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding common_peak2_118_955_-0.0537944377411037_9.8739695891102_0.43484447031477 chr11 118461215 118463489 + 0.43484447031477 NA Intergenic Intergenic -7357 NR_045902 100126224 Mm.441989 NR_045902 ENSMUSG00000086514 Gm11747 OTTMUSG00000003972 predicted gene 11747 ncRNA common_peak1_43_254_0.0920566170214494_8.04038174536958_0.434812208817671 chr6 136463519 136464478 + 0.434812208817671 NA Intergenic Intergenic -48429 NM_001201390 100502936 Mm.21182 NM_001201390 ENSMUSG00000045291 E330021D16Rik C85549 RIKEN cDNA E330021D16 gene protein-coding common_peak2_43_254_0.0920566170214494_8.04038174536958_0.434812208817671 chr5 139775060 139776353 + 0.434812208817671 NA promoter-TSS (NM_026748) promoter-TSS (NM_026748) -28 NM_026748 68510 Mm.292942 NM_026748 ENSMUSG00000029547 Ints1 1110015K06Rik integrator complex subunit 1 protein-coding common_peak1_22_111_0.131105882035906_6.87290786307556_0.434717699427005-3 chr2 165794054 165794609 + 0.434717699427005 NA intron (NM_001291158, intron 20 of 23) intron (NM_001291158, intron 20 of 23) 63842 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_22_111_0.131105882035906_6.87290786307556_0.434717699427005 chr1 87649622 87650024 + 0.434717699427005 NA intron (NR_122078, intron 2 of 27) intron (NR_122078, intron 2 of 27) 29511 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_22_111_0.131105882035906_6.87290786307556_0.434717699427005-4 chr5 21190404 21190976 + 0.434717699427005 NA intron (NM_175437, intron 1 of 30) intron (NM_175437, intron 1 of 30) 4423 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_22_111_0.131105882035906_6.87290786307556_0.434717699427005-2 chr11 114882368 114882912 + 0.434717699427005 NA Intergenic RLTR18B|LTR|ERVK -7401 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding common_peak2_359_3515_0.0262962159802935_11.7928674631336_0.434331435924574 chr3 30599407 30603690 + 0.434331435924574 NA promoter-TSS (NM_030557) promoter-TSS (NM_030557) -539 NM_001289623 80732 Mm.200378 NM_030557 ENSMUSG00000037730 Mynn 2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1 myoneurin protein-coding unique_peak2_37_244_-0.109661424419325_7.88180722679291_0.434297905177997-2 chr11 5415359 5416819 + 0.434297905177997 NA intron (NM_001080924, intron 1 of 8) intron (NM_001080924, intron 1 of 8) 28758 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding unique_peak2_37_244_-0.109661424419325_7.88180722679291_0.434297905177997 chr1 132345788 132347298 + 0.434297905177997 NA Intergenic Intergenic 21405 NM_001311108 68875 Mm.273785 NM_178874 ENSMUSG00000042066 Tmcc2 1110063G11Rik transmembrane and coiled-coil domains 2 protein-coding common_peak2_122_925_0.0507093979584745_9.88022308223947_0.434276194154604 chr5 20701446 20703135 + 0.434276194154604 NA 3' UTR (NM_015823, exon 22 of 22) 3' UTR (NM_015823, exon 22 of 22) 179834 NM_172992 68770 Mm.86410 NM_172992 ENSMUSG00000039987 Phtf2 1110054G21Rik|9530062N20Rik|AI447096|C77923 putative homeodomain transcription factor 2 protein-coding common_peak2_53_370_-0.0864554985948516_8.49204762732338_0.434236606315694-2 chr4 132532914 132534253 + 0.434236606315694 NA 5' UTR (NM_007512, exon 2 of 4) 5' UTR (NM_007512, exon 2 of 4) 1831 NM_007512 11983 Mm.2171 NM_007512 ENSMUSG00000054428 Atpif1 Atpi|IF(1)|If1 ATPase inhibitory factor 1 protein-coding common_peak2_53_370_-0.0864554985948516_8.49204762732338_0.434236606315694 chr3 36065292 36067027 + 0.434236606315694 NA exon (NM_172678, exon 1 of 18) exon (NM_172678, exon 1 of 18) 159 NM_172678 229211 Mm.260997 NM_172678 ENSMUSG00000027710 Acad9 2600017P15Rik|4732402K02|C630012L17Rik|NPD002 acyl-Coenzyme A dehydrogenase family, member 9 protein-coding common_peak1_53_370_-0.0864554985948516_8.49204762732338_0.434236606315694-2 chr4 141060865 141061387 + 0.434236606315694 NA promoter-TSS (NM_001145958) promoter-TSS (NM_001145958) -581 NM_001145958 230872 Mm.80685 NM_172122 ENSMUSG00000040860 Crocc - ciliary rootlet coiled-coil, rootletin protein-coding common_peak1_53_370_-0.0864554985948516_8.49204762732338_0.434236606315694 chr19 5256760 5257626 + 0.434236606315694 NA intron (NM_153129, intron 1 of 23) intron (NM_153129, intron 1 of 23) 15926 NM_153129 107975 Mm.234923 NM_153129 ENSMUSG00000024855 Pacs1 AI325977 phosphofurin acidic cluster sorting protein 1 protein-coding common_peak2_32_176_0.109714397577882_7.52246274887194_0.434195503434584-2 chr16 96906893 96907953 + 0.434195503434584 NA intron (NM_031174, intron 3 of 32) B4A|SINE|B4 263312 NM_031174 13508 Mm.102437 NM_031174 ENSMUSG00000050272 Dscam 4932410A21Rik Down syndrome cell adhesion molecule protein-coding common_peak2_32_176_0.109714397577882_7.52246274887194_0.434195503434584 chr12 32006116 32007069 + 0.434195503434584 NA intron (NM_011158, intron 2 of 10) intron (NM_011158, intron 2 of 10) 54687 NM_011158 19088 Mm.25594 NM_011158 ENSMUSG00000002997 Prkar2b AI451071|AW061005|PKARIIbeta|Pkarb2|RII(beta) protein kinase, cAMP dependent regulatory, type II beta protein-coding common_peak2_74_498_0.0672537029524065_8.99652285681346_0.433968869777064 chr2 32875278 32876998 + 0.433968869777064 NA promoter-TSS (NM_146119) promoter-TSS (NM_146119) 4 NM_146119 227737 Mm.301646 NM_146119 ENSMUSG00000026796 Fam129b 9130404D14Rik family with sequence similarity 129, member B protein-coding common_peak1_79_540_0.0648740661766727_9.11192181691515_0.433765129632493 chr2 181458332 181459447 + 0.433765129632493 NA intron (NM_028125, intron 1 of 2) CpG 537 NM_028125 72147 Mm.486504 NM_027656 ENSMUSG00000027583 Zbtb46 2610019F01Rik|4933406L05Rik|BZEL|Btbd4 zinc finger and BTB domain containing 46 protein-coding common_peak2_284_2632_0.0301125003824332_11.3775480562373_0.43362253084519 chr18 34930338 34933134 + 0.43362253084519 NA intron (NM_144866, intron 1 of 10) CpG-6828 267 NM_144866 225363 Mm.329353 NM_144866 ENSMUSG00000024360 Etf1 AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding common_peak2_276_2540_0.0310393889941754_11.3267003545504_0.433620969410107 chr19 26604253 26608324 + 0.433620969410107 NA intron (NM_011416, intron 1 of 32) CpG 1128 NM_011416 67155 Mm.342988 NM_011416 ENSMUSG00000024921 Smarca2 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding common_peak1_111_823_0.0532888452074189_9.71314494978693_0.433552197390584 chr13 81657185 81658495 + 0.433552197390584 NA promoter-TSS (NM_030257) promoter-TSS (NM_030257) 34 NM_030257 80289 Mm.259969 NM_030257 ENSMUSG00000035840 Lysmd3 1110030H10Rik|BC003322 LysM, putative peptidoglycan-binding, domain containing 3 protein-coding common_peak1_30_192_-0.125774832533774_7.52956962100119_0.433473340101169 chr1 164934039 164934667 + 0.433473340101169 NA intron (NM_008510, intron 1 of 2) intron (NM_008510, intron 1 of 2) 1157 NM_008510 16963 Mm.190 NM_008510 ENSMUSG00000026573 Xcl1 AI661682|ATAC|LTN|Lptn|SCM-1|SCM-1a|Scyc1 chemokine (C motif) ligand 1 protein-coding common_peak1_169_1468_-0.0423645215174329_10.4994364197976_0.43339391428205 chr4 126103936 126105016 + 0.43339391428205 NA intron (NM_028800, intron 1 of 10) intron (NM_028800, intron 1 of 10) 519 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak2_125_1023_-0.0517785288618615_9.97411073556907_0.433311845998057 chr10 81996471 81998002 + 0.433311845998057 NA Intergenic CpG -50891 NM_001024626 408062 Mm.391409 NM_001024626 ENSMUSG00000061371 Zfp873 - zinc finger protein 873 protein-coding common_peak2_41_275_-0.104437501793313_8.05630570588151_0.433302807401236 chr8 117342637 117344179 + 0.433302807401236 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) -5762 NM_028941 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_45_306_-0.0970217300903133_8.21358398032502_0.433245125416393 chr18 35552607 35554022 + 0.433245125416393 NA promoter-TSS (NR_038073) promoter-TSS (NR_038073) -96 NR_038073 100503380 Mm.482118 NR_038073 ENSMUSG00000097769 Snhg4 Gm17457 small nucleolar RNA host gene 4 ncRNA common_peak2_117_879_0.0507790027035213_9.80674921487642_0.433071719599688 chr8 84686088 84688481 + 0.433071719599688 NA intron (NM_025788, intron 1 of 5) CpG 578 NM_025788 66830 Mm.289698 NM_025788 ENSMUSG00000001910 Nacc1 2010001H03Rik|4930511N13Rik|Btbd14b|Nac1 nucleus accumbens associated 1, BEN and BTB (POZ) domain containing protein-coding common_peak1_65_424_0.0726132278221723_8.76762564493615_0.432929242611296 chr7 109959522 109960594 + 0.432929242611296 NA intron (NM_021494, intron 1 of 22) CpG 364 NM_021494 19347 Mm.21904 NM_021494 ENSMUSG00000035901 Dennd5a 1500012B19Rik|AJ245569|AW496491|ORF37|Rab6ip1|mKIAA1091 DENN/MADD domain containing 5A protein-coding common_peak2_223_1952_0.0349254496902027_10.9489389587319_0.432925740150731 chr2 25463855 25467320 + 0.432925740150731 NA Intergenic Intergenic 4162 NM_008963 19215 Mm.1008 NM_008963 ENSMUSG00000015090 Ptgds 21kDa|L-PGDS|PGD2|PGDS|PGDS2|Ptgs3 prostaglandin D2 synthase (brain) protein-coding common_peak1_154_1235_0.0433247637082523_10.2931254097585_0.432673780053595 chr9 20975841 20977136 + 0.432673780053595 NA intron (NM_010333, intron 1 of 1) CpG 305 NM_010333 14739 Mm.46493 NM_010333 ENSMUSG00000043895 S1pr2 1100001A16Rik|Edg5|Gpcr13|H218|LPb2|S1P2 sphingosine-1-phosphate receptor 2 protein-coding common_peak1_144_1212_-0.04759493372962_10.2205663682557_0.43245240672495 chr2 32535226 32536830 + 0.43245240672495 NA 5' UTR (NM_153560, exon 1 of 11) 5' UTR (NM_153560, exon 1 of 11) 669 NM_153560 98952 Mm.4065 NM_153560 ENSMUSG00000039157 Fam102a AI426465|C230093N12Rik|Eeig1 family with sequence similarity 102, member A protein-coding common_peak1_170_1479_-0.0427482248128541_10.5100073481099_0.432395214566691 chr9 65020838 65022862 + 0.432395214566691 NA promoter-TSS (NM_021345) promoter-TSS (NM_021345) -133 NM_021345 57874 Mm.308180 NM_021345 ENSMUSG00000033629 Hacd3 4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1 3-hydroxyacyl-CoA dehydratase 3 protein-coding common_peak1_92_710_-0.062889028731826_9.4422612352535_0.432326948475486 chr1 130716684 130718107 + 0.432326948475486 NA promoter-TSS (NM_178691) promoter-TSS (NM_178691) 68 NM_178691 226418 Mm.106553 NM_178691 ENSMUSG00000046404 Yod1 6330564D18Rik|9930028C20Rik|Hshin7 YOD1 deubiquitinase protein-coding common_peak1_651_7514_-0.018488322509647_12.8663132275489_0.432267327005593 chr9 32923771 32929747 + 0.432267327005593 NA intron (NR_131058, intron 1 of 3) intron (NR_131058, intron 1 of 3) 2207 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak1_177_1552_-0.0412114344367573_10.5802363971689_0.432202310243046 chr19 7481811 7484066 + 0.432202310243046 NA intron (NM_001003934, intron 1 of 8) CpG 353 NM_001271486 20168 Mm.246990 NM_053076 ENSMUSG00000024758 Rtn3 RTN3-A1 reticulon 3 protein-coding common_peak2_36_204_0.100303551705964_7.72963187535843_0.432168897642155 chr10 118049785 118051045 + 0.432168897642155 NA Intergenic Intergenic -91372 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak2_36_204_0.100303551705964_7.72963187535843_0.432168897642155-2 chr12 70231660 70232977 + 0.432168897642155 NA intron (NR_045174, intron 2 of 4) intron (NR_045174, intron 2 of 4) 4477 NR_045174 414124 Mm.416164 NR_045174 ENSMUSG00000085298 F730035M05Rik - RIKEN cDNA F730035M05 gene ncRNA common_peak2_36_204_0.100303551705964_7.72963187535843_0.432168897642155-3 chr2 75937901 75939000 + 0.432168897642155 NA promoter-TSS (NM_028235) promoter-TSS (NM_028235) 12 NM_028235 72421 Mm.275109 NM_028235 ENSMUSG00000075273 Ttc30b 2510042P03Rik|Tcc30b tetratricopeptide repeat domain 30B protein-coding common_peak2_72_531_-0.0729634091155607_9.01880073094341_0.431917338975342 chr15 76948047 76949417 + 0.431917338975342 NA 5' UTR (NM_054099, exon 1 of 4) 5' UTR (NM_054099, exon 1 of 4) 188 NM_054099 117171 Mm.322968 NM_054099 ENSMUSG00000063236 1110038F14Rik - RIKEN cDNA 1110038F14 gene protein-coding common_peak1_324_3220_-0.0282728381715991_11.639156526297_0.431905997693469 chr13 20090092 20092433 + 0.431905997693469 NA intron (NM_080288, intron 1 of 21) CpG 755 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding common_peak2_101_732_0.0566137001800016_9.54597623822381_0.431850378976761 chr10 96273113 96275549 + 0.431850378976761 NA Intergenic Intergenic 48124 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_338_3263_0.0272286723541892_11.6860396781486_0.431834447277324 chr12 69578886 69583114 + 0.431834447277324 NA intron (NM_001033236, intron 4 of 5) intron (NM_001033236, intron 4 of 5) 2028 NM_001033236 207965 Mm.102487 NM_001033236 ENSMUSG00000049882 Vcpkmt Gm71|Mettl21d|Mettl221d|VCP-KMT valosin containing protein lysine (K) methyltransferase protein-coding common_peak2_118_888_0.0510327614098749_9.82155598953471_0.431757725098509 chr12 71135997 71137939 + 0.431757725098509 NA promoter-TSS (NM_001024854) promoter-TSS (NM_001024854) 120 NM_001163378 76967 Mm.87290 NM_029818 ENSMUSG00000034601 2700049A03Rik Ta3|Talpid3|mKIAA0586 RIKEN cDNA 2700049A03 gene protein-coding common_peak2_29_156_0.114035683706076_7.35163859074467_0.431624937576321 chr1 21869852 21871378 + 0.431624937576321 NA intron (NM_001310477, intron 1 of 12) intron (NM_001310477, intron 1 of 12) 91327 NM_001160139 226922 Mm.336519 NM_023872 ENSMUSG00000028033 Kcnq5 7730402H11|9230107O05Rik|AA589396|D1Mgi1 potassium voltage-gated channel, subfamily Q, member 5 protein-coding common_peak1_27_170_-0.131287764867973_7.35220863245191_0.431624937576321 chr7 72271163 72271766 + 0.431624937576321 NA intron (NM_001024703, intron 1 of 22) intron (NM_001024703, intron 1 of 22) 35131 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding common_peak2_27_170_-0.131287764867973_7.35220863245191_0.431624937576321 chr5 138160506 138161635 + 0.431624937576321 NA promoter-TSS (NM_012002) promoter-TSS (NM_012002) -32 NM_012002 26893 Mm.3981 NM_012002 ENSMUSG00000019494 Cops6 Sgn3|VIP/MOV34 COP9 signalosome subunit 6 protein-coding common_peak1_34_221_-0.112970151826572_7.73793079043682_0.431552931600771-2 chr9 107337996 107338682 + 0.431552931600771 NA promoter-TSS (NM_133984) promoter-TSS (NM_133984) 11 NM_133984 69536 Mm.259467 NM_133984 ENSMUSG00000032579 Hemk1 2310008M14Rik|AW049265 HemK methyltransferase family member 1 protein-coding common_peak1_34_221_-0.112970151826572_7.73793079043682_0.431552931600771 chr15 5446597 5447200 + 0.431552931600771 NA Intergenic Intergenic -49420 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak2_34_221_-0.112970151826572_7.73793079043682_0.431552931600771 chr1 181248871 181250383 + 0.431552931600771 NA Intergenic RLTR31D_MM|LTR|ERVK -37649 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding unique_peak2_34_221_-0.112970151826572_7.73793079043682_0.431552931600771 chr14 53901443 53902556 + 0.431552931600771 NA Intergenic Intergenic 351930 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_199_1787_-0.0382788954878652_10.7849915734394_0.431272790939084 chr15 78590351 78593180 + 0.431272790939084 NA Intergenic Intergenic -5282 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak1_412_4167_0.0239229520287871_12.0371010382929_0.431268218214142 chr6 113659481 113663691 + 0.431268218214142 NA intron (NM_001113553, intron 2 of 11) intron (NM_001113553, intron 2 of 11) 23119 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding common_peak2_162_1315_0.0419006701861289_10.3828941088283_0.431160551098937 chr2 32136910 32138749 + 0.431160551098937 NA Intergenic Intergenic -13319 NM_172661 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding unique_peak2_63_453_-0.077070601793034_8.7880131863944_0.431136319001359 chr2 33856331 33858839 + 0.431136319001359 NA intron (NM_175184, intron 2 of 9) L1MEc|LINE|L1 30361 NM_175184 72543 Mm.254914 NM_175184 ENSMUSG00000038740 Mvb12b 2610200O14Rik|2610528K11Rik|AI414895|Fam125b multivesicular body subunit 12B protein-coding common_peak1_139_1161_-0.0477240165082833_10.1585323451504_0.431133962873792 chr15 78587479 78588931 + 0.431133962873792 NA Intergenic Intergenic -8842 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding common_peak2_229_2117_-0.0353081718341528_11.0308327880753_0.430781674494724 chr15 73089592 73091613 + 0.430781674494724 NA intron (NM_053068, intron 1 of 2) CpG 190 NM_053068 93696 Mm.23095 NM_053068 ENSMUSG00000068391 Chrac1 2410152E03Rik|2810406L04Rik|YCL1 chromatin accessibility complex 1 protein-coding common_peak2_152_1293_-0.0458166087117675_10.3147135976366_0.430709564196754 chr2 152331388 152333257 + 0.430709564196754 NA 5' UTR (NM_001083921, exon 1 of 12) 5' UTR (NM_001083921, exon 1 of 12) 103 NM_001083921 24105 Mm.182145 NM_019705 ENSMUSG00000027466 Rbck1 AL033326|HOIL-1|HOIL-1L|UIP28|Ubce7ip3 RanBP-type and C3HC4-type zinc finger containing 1 protein-coding common_peak2_93_719_-0.0621096977172986_9.46079824747103_0.430649389129058 chr7 67644581 67646280 + 0.430649389129058 NA promoter-TSS (NR_028144) promoter-TSS (NR_028144) -194 NR_028143 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak1_113_842_0.0517222097944483_9.74524992583931_0.430617212458757 chr10 57752010 57754156 + 0.430617212458757 NA Intergenic Intergenic -31840 NM_021272 12140 Mm.3644 NM_021272 ENSMUSG00000019874 Fabp7 B-FABP|BFABP|Blbp|MRG fatty acid binding protein 7, brain protein-coding common_peak2_104_821_-0.0574143530048641_9.65428740717925_0.430571509487308 chr18 65404907 65406760 + 0.430571509487308 NA intron (NR_105742, intron 3 of 6) B3A|SINE|B2 -11945 NM_001037294 225638 Mm.296528 NM_001037294 ENSMUSG00000032845 Alpk2 Gm549|Hak alpha-kinase 2 protein-coding common_peak2_137_1069_0.0458125501446407_10.0863013563608_0.430485233590366 chr8 25784352 25786391 + 0.430485233590366 NA promoter-TSS (NM_026121) promoter-TSS (NM_026121) -162 NM_026121 67384 Mm.118400 NM_026121 ENSMUSG00000037316 Bag4 2410112I15Rik|SODD BCL2-associated athanogene 4 protein-coding common_peak1_38_251_-0.104336473892056_7.92511168655389_0.430449396310981-2 chr16 98081643 98082432 + 0.430449396310981 NA intron (NR_015491, intron 1 of 4) intron (NR_015491, intron 1 of 4) 402 NR_015491 320586 Mm.442230 NR_015491 A630089N07Rik - RIKEN cDNA A630089N07 gene ncRNA common_peak1_38_251_-0.104336473892056_7.92511168655389_0.430449396310981 chr1 177794651 177795513 + 0.430449396310981 NA intron (NM_007422, intron 1 of 12) intron (NM_007422, intron 1 of 12) 1427 NM_007422 11566 Mm.338021 NM_007422 ENSMUSG00000015961 Adss AI314886|AS|Adss2 adenylosuccinate synthetase, non muscle protein-coding unique_peak2_15_89_-0.195599833204507_6.39405317972742_0.430360740609959-2 chr8 117673212 117673882 + 0.430360740609959 NA Intergenic Intergenic -2032 NM_028725 74032 Mm.296302 NM_028725 ENSMUSG00000034308 Sdr42e1 4632417N05Rik|AI117603 short chain dehydrogenase/reductase family 42E, member 1 protein-coding unique_peak2_15_89_-0.195599833204507_6.39405317972742_0.430360740609959-3 chrX 101131954 101132917 + 0.430360740609959 NA intron (NM_001110311, intron 4 of 5) L1M8|LINE|L1 -47030 NM_007515 11989 Mm.5140 NM_007515 ENSMUSG00000031297 Slc7a3 Atrc3|CAT-3|CAT3|SLC7A1|SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 protein-coding common_peak1_15_89_-0.195599833204507_6.39405317972742_0.430360740609959-2 chr3 52569179 52569571 + 0.430360740609959 NA Intergenic Intergenic -170349 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak1_15_89_-0.195599833204507_6.39405317972742_0.430360740609959 chr11 83665152 83665456 + 0.430360740609959 NA TTS (NM_013652) TTS (NM_013652) 2720 NM_013652 20303 Mm.244263 NM_013652 ENSMUSG00000018930 Ccl4 AT744.1|Act-2|MIP-1B|Mip1b|Scya4 chemokine (C-C motif) ligand 4 protein-coding unique_peak2_15_89_-0.195599833204507_6.39405317972742_0.430360740609959 chr14 63177374 63177930 + 0.430360740609959 NA intron (NM_010191, intron 3 of 9) intron (NM_010191, intron 3 of 9) 1926 NM_010191 14137 Mm.474432 NM_010191 ENSMUSG00000021273 Fdft1 SQS|SS farnesyl diphosphate farnesyl transferase 1 protein-coding common_peak1_125_954_0.0488645482150272_9.92378919703063_0.430296234601859 chr16 46119315 46120972 + 0.430296234601859 NA 5' UTR (NM_032465, exon 1 of 15) 5' UTR (NM_032465, exon 1 of 15) 105 NM_032465 84544 Mm.29204 NM_032465 ENSMUSG00000022657 Cd96 1700109I12Rik|Tactile CD96 antigen protein-coding common_peak1_57_360_0.0794205988117547_8.53556532629305_0.430280678626424 chr7 34229215 34230312 + 0.430280678626424 NA intron (NM_008155, intron 1 of 17) intron (NM_008155, intron 1 of 17) 573 NM_008155 14751 Mm.589 NM_008155 ENSMUSG00000036427 Gpi1 Amf|Gpi|Gpi-1|Gpi-1r|Gpi-1s|Gpi-1t|Gpi1-r|Gpi1-s|Gpi1-t|Gpi1s|MF|NK|NK/GPI|Nlk|Org|Pgi|Phi glucose phosphate isomerase 1 protein-coding common_peak1_68_496_-0.0745067213154922_8.91984868090454_0.430254818300116 chr4 117133350 117134143 + 0.430254818300116 NA exon (NM_001313916, exon 1 of 15) exon (NM_001313916, exon 1 of 15) 217 NM_013807 12795 Mm.259022 NM_013807 ENSMUSG00000028680 Plk3 Cnk|Fnk|PLK-3|PRK polo-like kinase 3 protein-coding common_peak2_88_673_-0.0635864124176706_9.36481157497302_0.430207723243236 chr1 164964703 164967749 + 0.430207723243236 NA Intergenic Intergenic -30716 NM_008510 16963 Mm.190 NM_008510 ENSMUSG00000026573 Xcl1 AI661682|ATAC|LTN|Lptn|SCM-1|SCM-1a|Scyc1 chemokine (C motif) ligand 1 protein-coding common_peak1_269_2571_-0.0317494624236758_11.3128001961161_0.430159777880229 chr8 13104301 13106572 + 0.430159777880229 NA promoter-TSS (NM_146207) promoter-TSS (NM_146207) -93 NM_178708 234069 Mm.103427 NM_178708 ENSMUSG00000038542 Pcid2 A730042J05Rik PCI domain containing 2 protein-coding common_peak1_215_1962_-0.0367999570675082_10.9204444789324_0.43011153123419 chr11 86593185 86595265 + 0.43011153123419 NA intron (NM_029478, intron 10 of 11) intron (NM_029478, intron 10 of 11) -10067 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_86_600_0.0615766499546666_9.26200950568852_0.430054540380158 chr1 92179347 92180427 + 0.430054540380158 NA intron (NM_207225, intron 1 of 26) CpG 454 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_110_878_-0.0558011877787088_9.75181876125405_0.430015810430661 chr5 117133474 117135175 + 0.430015810430661 NA intron (NM_001081308, intron 1 of 19) intron (NM_001081308, intron 1 of 19) 736 NM_183306 330177 Mm.24343 NM_183306 ENSMUSG00000061288 Taok3 2900006A08Rik|A130052D22|A430105I05Rik TAO kinase 3 protein-coding common_peak2_71_473_0.069166735347121_8.92332661657182_0.429988320919059 chr2 130905747 130907227 + 0.429988320919059 NA promoter-TSS (NM_009730) promoter-TSS (NM_009730) -9 NM_009730 11990 Mm.119936 NM_009730 ENSMUSG00000027312 Atrn AW558010|Mgca|mg attractin protein-coding common_peak2_42_282_-0.0989310725779315_8.09519270654292_0.429909951106294 chr10 13008379 13009250 + 0.429909951106294 NA exon (NM_175102, exon 1 of 1) exon (NM_175102, exon 1 of 1) 364 NM_175102 66125 Mm.29743 NM_175102 ENSMUSG00000078348 Sf3b5 10kDa|1110005L13Rik|AU043053|Sf3b10 splicing factor 3b, subunit 5 protein-coding common_peak1_42_282_-0.0989310725779315_8.09519270654292_0.429909951106294 chr1 193444438 193445309 + 0.429909951106294 NA Intergenic MLT1A0|LTR|ERVL-MaLR 62657 NR_029592 387201 NR_029592 ENSMUSG00000065533 Mir205 Mirn205|mir-205|mmu-mir-205 microRNA 205 ncRNA common_peak1_83_628_-0.0662169407080775_9.26380773652525_0.429844539850359 chr11 100527027 100527917 + 0.429844539850359 NA intron (NM_001199296, intron 1 of 28) CpG 528 NM_134037 104112 Mm.282039 NM_134037 ENSMUSG00000020917 Acly A730098H14Rik|AW538652 ATP citrate lyase protein-coding common_peak2_83_628_-0.0662169407080775_9.26380773652525_0.429844539850359 chr4 126966881 126968724 + 0.429844539850359 NA intron (NM_001114399, intron 1 of 29) CpG 121 NM_001114399 67785 Mm.165401 NM_001114399 ENSMUSG00000042446 Zmym4 6330503C17Rik|AI480785|AW493829|CDIR|D630001M21|MYM|Zfp262|Znf262|mKIAA0425 zinc finger, MYM-type 4 protein-coding common_peak1_26_136_0.124175483879069_7.16011982490006_0.429839189251558 chr8 117512909 117513420 + 0.429839189251558 NA intron (NM_172285, intron 2 of 32) intron (NM_172285, intron 2 of 32) 14873 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak2_26_136_0.124175483879069_7.16011982490006_0.429839189251558 chr2 24961949 24963056 + 0.429839189251558 NA promoter-TSS (NM_026044) promoter-TSS (NM_026044) 80 NM_026044 67228 Mm.389248 NM_026044 ENSMUSG00000026975 Dph7 2810443J12Rik|AW060693|Wdr85 diphthamine biosynethesis 7 protein-coding common_peak1_26_136_0.124175483879069_7.16011982490006_0.429839189251558-2 chr9 20975398 20975838 + 0.429839189251558 NA intron (NM_010333, intron 1 of 1) intron (NM_010333, intron 1 of 1) 1175 NM_010333 14739 Mm.46493 NM_010333 ENSMUSG00000043895 S1pr2 1100001A16Rik|Edg5|Gpcr13|H218|LPb2|S1P2 sphingosine-1-phosphate receptor 2 protein-coding unique_peak2_24_149_-0.142803498359497_7.15741694131613_0.429839189251558 chr10 95022348 95023487 + 0.429839189251558 NA Intergenic Intergenic -78339 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding common_peak2_24_149_-0.142803498359497_7.15741694131613_0.429839189251558 chr1 55363247 55363989 + 0.429839189251558 NA promoter-TSS (NM_029267) promoter-TSS (NM_029267) -149 NM_029267 75388 Mm.483408 NM_029267 ENSMUSG00000025977 Boll 4930554P13Rik|4930597B14Rik bol, boule-like (Drosophila) protein-coding common_peak1_24_149_-0.142803498359497_7.15741694131613_0.429839189251558 chr10 88426008 88426512 + 0.429839189251558 NA intron (NM_001004164, intron 7 of 20) RCHARR1|DNA|hAT-Charlie -33327 NM_011517 20962 Mm.297977 NM_011517 ENSMUSG00000020059 Sycp3 Cor1|Scp3 synaptonemal complex protein 3 protein-coding common_peak1_24_149_-0.142803498359497_7.15741694131613_0.429839189251558-2 chr10 95009179 95009767 + 0.429839189251558 NA Intergenic ORR1B2|LTR|ERVL-MaLR -64895 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding unique_peak2_10_58_-0.249457617854246_5.75791424043472_0.429827778234683 chr12 17873602 17873992 + 0.429827778234683 NA Intergenic MMVL30-int|LTR|ERV1 182983 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_78_583_-0.0677254677667012_9.15596182499667_0.429805665295612 chr8 119910200 119911683 + 0.429805665295612 NA intron (NM_001310630, intron 1 of 13) CpG 581 NM_001310630 22224 Mm.256910 NM_009462 ENSMUSG00000031826 Usp10 2610014N07Rik|UBPO|Uchrp|mKIAA0190 ubiquitin specific peptidase 10 protein-coding common_peak1_81_557_0.0639342644225955_9.15608844404048_0.429805665295414 chr2 71211562 71212666 + 0.429805665295414 NA intron (NM_010064, intron 1 of 15) CpG 168 NM_010064 13427 Mm.249479 NM_010064 ENSMUSG00000027012 Dync1i2 3110079H08Rik|AW554389|Dncic2 dynein cytoplasmic 1 intermediate chain 2 protein-coding common_peak1_99_774_-0.0588126856525051_9.56864615733535_0.429781801017525 chr10 62601584 62602946 + 0.429781801017525 NA promoter-TSS (NM_019553) promoter-TSS (NM_019553) 33 NM_019553 56200 Mm.413275 NM_019553 ENSMUSG00000020075 Ddx21 AI255159|AL022742|D10Ertd645e|D10Wsu42e DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 protein-coding common_peak1_46_314_-0.0960769309612619_8.25116955290665_0.429770350154923 chr1 177983375 177984284 + 0.429770350154923 NA Intergenic CpG -7606 NM_001034899 545391 Mm.442974 NM_001034899 ENSMUSG00000091476 Gm16432 EG545391|EG666250 predicted gene 16432 protein-coding common_peak1_76_515_0.0654942853498124_9.04397439809816_0.429683768214894 chr19 7039117 7040105 + 0.429683768214894 NA intron (NM_016737, intron 1 of 13) CpG 415 NM_016737 20867 Mm.258633 NM_016737 ENSMUSG00000024966 Stip1 Hop|Sti1|p60 stress-induced phosphoprotein 1 protein-coding common_peak1_191_1612_0.0380816784955211_10.6745715624034_0.429674353298601 chr15 66577480 66578685 + 0.429674353298601 NA intron (NM_001081409, intron 1 of 20) CpG 510 NM_001081409 239510 Mm.267473 NM_178718 ENSMUSG00000072501 Phf20l1 CGI-72|E130113K22Rik PHD finger protein 20-like 1 protein-coding common_peak2_108_796_0.0533063215391643_9.66508907476005_0.42961359947159 chr13 101735323 101737636 + 0.42961359947159 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) 31738 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_14_64_0.159676308382894_6.1022059672199_0.429508824963706 chr3 110251130 110251526 + 0.429508824963706 NA promoter-TSS (NM_178891) promoter-TSS (NM_178891) -329 NR_024139 99890 Mm.36115 NM_178891 ENSMUSG00000049300 Prmt6 AW124876|BB233495|Hrmt1l6 protein arginine N-methyltransferase 6 protein-coding unique_peak2_14_64_0.159676308382894_6.1022059672199_0.429508824963706 chr10 39432336 39433030 + 0.429508824963706 NA intron (NM_001122892, intron 2 of 12) LTR33|LTR|ERVL 62884 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_14_64_0.159676308382894_6.1022059672199_0.429508824963706-2 chr8 81636442 81636796 + 0.429508824963706 NA intron (NM_001297591, intron 2 of 24) intron (NM_001297591, intron 2 of 24) 294057 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding common_peak1_275_2530_0.0303281505088204_11.3206558673651_0.429452881761687 chr5 124352425 124355078 + 0.429452881761687 NA intron (NM_013812, intron 1 of 3) CpG 877 NM_013812 13445 Mm.391838 NM_013812 ENSMUSG00000029394 Cdk2ap1 Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein-coding common_peak2_160_1374_-0.0432189899404047_10.4036064083292_0.429334360791713 chr2 180435843 180439031 + 0.429334360791713 NA Intergenic Intergenic -23541 NM_148933 108115 Mm.133687 NM_148933 ENSMUSG00000038963 Slco4a1 OATP-E|Slc21a12 solute carrier organic anion transporter family, member 4a1 protein-coding common_peak1_33_183_0.106586616103514_7.57685526410877_0.429299703681598-2 chr2 32727291 32727992 + 0.429299703681598 NA promoter-TSS (NM_001252547) promoter-TSS (NM_001252547) -48 NM_001252547 27387 Mm.9593 NM_013781 ENSMUSG00000059013 Sh2d3c Chat|Nsp3|Shep1 SH2 domain containing 3C protein-coding common_peak1_33_183_0.106586616103514_7.57685526410877_0.429299703681598 chr1 153748217 153748871 + 0.429299703681598 NA promoter-TSS (NM_011882) promoter-TSS (NM_011882) -882 NM_011882 24014 Mm.259254 NM_011882 ENSMUSG00000066800 Rnasel E230029I04Rik ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) protein-coding common_peak1_18_108_-0.167820121380036_6.68427426408691_0.429261406766792-3 chr4 122835448 122835987 + 0.429261406766792 NA promoter-TSS (NM_008917) promoter-TSS (NM_008917) -510 NM_008917 19063 Mm.277719 NM_008917 ENSMUSG00000028657 Ppt1 9530043G02Rik|AA960502|C77813|CLN1|D4Ertd184e|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding common_peak1_18_108_-0.167820121380036_6.68427426408691_0.429261406766792-5 chr7 16204413 16204792 + 0.429261406766792 NA intron (NM_027883, intron 9 of 16) ID4|SINE|ID 17391 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak1_18_108_-0.167820121380036_6.68427426408691_0.429261406766792-2 chr4 70534324 70534735 + 0.429261406766792 NA exon (NM_172694, exon 1 of 6) exon (NM_172694, exon 1 of 6) 399 NM_172694 230316 Mm.251188 NM_172694 ENSMUSG00000039270 Megf9 4933405H16Rik|9630025C07|Egfl5|mKIAA0818 multiple EGF-like-domains 9 protein-coding common_peak1_18_108_-0.167820121380036_6.68427426408691_0.429261406766792 chr2 167145480 167145960 + 0.429261406766792 NA intron (NM_008420, intron 1 of 1) intron (NM_008420, intron 1 of 1) 43098 NM_008420 16500 Mm.205341 NM_008420 ENSMUSG00000050556 Kcnb1 Kcr1-1|Kv2.1|Shab potassium voltage gated channel, Shab-related subfamily, member 1 protein-coding common_peak1_18_108_-0.167820121380036_6.68427426408691_0.429261406766792-4 chr6 113442192 113442566 + 0.429261406766792 NA promoter-TSS (NM_001243739) promoter-TSS (NM_001243739) -138 NM_001205025 67767 Mm.2053 NM_026365 ENSMUSG00000051256 Jagn1 5830427H10Rik jagunal homolog 1 protein-coding unique_peak2_18_108_-0.167820121380036_6.68427426408691_0.429261406766792 chr1 52082905 52083829 + 0.429261406766792 NA intron (NM_011487, intron 13 of 23) intron (NM_011487, intron 13 of 23) -36071 NM_009283 20846 Mm.277406 NM_009283 ENSMUSG00000026104 Stat1 2010005J02Rik|AA408197 signal transducer and activator of transcription 1 protein-coding common_peak2_21_128_-0.151429512729303_6.9355124990586_0.429234176275016 chr6 41562336 41563188 + 0.429234176275016 NA Intergenic Intergenic 40986 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak1_21_128_-0.151429512729303_6.9355124990586_0.429234176275016-4 chr17 27635353 27635861 + 0.429234176275016 NA promoter-TSS (NM_025963) promoter-TSS (NM_025963) -365 NM_025963 67097 Mm.275810 NM_025963 ENSMUSG00000052146 Rps10 2210402A09Rik ribosomal protein S10 protein-coding unique_peak2_21_128_-0.151429512729303_6.9355124990586_0.429234176275016-3 chr6 130122222 130123315 + 0.429234176275016 NA intron (NM_053151, intron 4 of 7) L1MA10|LINE|L1 7067 NM_010650 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding common_peak1_21_128_-0.151429512729303_6.9355124990586_0.429234176275016-2 chr11 114907895 114908408 + 0.429234176275016 NA Intergenic MTD|LTR|ERVL-MaLR 18110 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding unique_peak2_21_128_-0.151429512729303_6.9355124990586_0.429234176275016 chr1 89070298 89071010 + 0.429234176275016 NA intron (NM_133816, intron 1 of 5) CpG 192 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 protein-coding common_peak1_21_128_-0.151429512729303_6.9355124990586_0.429234176275016-3 chr12 84450389 84450954 + 0.429234176275016 NA promoter-TSS (NM_173756) promoter-TSS (NM_173756) 353 NM_134042 104776 Mm.247510 NM_134042 ENSMUSG00000021238 Aldh6a1 1110038I05Rik|Mmsdh aldehyde dehydrogenase family 6, subfamily A1 protein-coding unique_peak2_21_128_-0.151429512729303_6.9355124990586_0.429234176275016-2 chr14 31323527 31324545 + 0.429234176275016 NA promoter-TSS (NM_001033668) promoter-TSS (NM_001033668) -140 NM_001033668 110084 Mm.101811 NM_001033668 ENSMUSG00000019027 Dnah1 B230373P09Rik|Dnahc1|E030034C22Rik|MDHC7 dynein, axonemal, heavy chain 1 protein-coding common_peak1_21_128_-0.151429512729303_6.9355124990586_0.429234176275016 chr10 62577919 62578523 + 0.429234176275016 NA exon (NM_028197, exon 1 of 7) exon (NM_028197, exon 1 of 7) 236 NM_028197 72320 Mm.258955 NM_028197 ENSMUSG00000036955 Kif1bp 0710007C18Rik|2510003E04Rik|KBP|mKIAA1279 KIF1 binding protein protein-coding common_peak2_105_830_-0.0563505901408767_9.67052937169991_0.429139937747833 chr16 11447751 11450003 + 0.429139937747833 NA intron (NM_001290148, intron 6 of 13) ORR1E|LTR|ERVL-MaLR 43229 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak2_167_1447_-0.0425343097256388_10.4785787322204_0.428978498041653 chr6 127564800 127567722 + 0.428978498041653 NA Intergenic Intergenic -11714 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak1_62_400_0.0741507334968627_8.68453379320335_0.428903250546492 chr12 91848313 91849346 + 0.428903250546492 NA intron (NM_011344, intron 1 of 20) CpG 328 NM_001039089 20338 Mm.250605 NM_011344 ENSMUSG00000020964 Sel1l AW493766|Sel1h|mKIAA4137 sel-1 suppressor of lin-12-like (C. elegans) protein-coding common_peak1_31_199_-0.1209906154632_7.58336088204312_0.428629544272551 chr4 48072426 48073123 + 0.428629544272551 NA intron (NM_015743, intron 7 of 7) intron (NM_015743, intron 7 of 7) 21528 NM_001307989 18124 Mm.247261 NM_015743 ENSMUSG00000028341 Nr4a3 AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC nuclear receptor subfamily 4, group A, member 3 protein-coding common_peak1_89_682_-0.0629508195391022_9.38426635852054_0.428467048124543 chr15 100731943 100733402 + 0.428467048124543 NA promoter-TSS (NR_045782) promoter-TSS (NR_045782) 65 NR_045781 619313 Mm.123436 NR_045781 I730030J21Rik - RIKEN cDNA I730030J21 gene ncRNA common_peak1_277_2553_0.0300542822762342_11.3335699508408_0.428308204874283 chr18 34930885 34932942 + 0.428308204874283 NA promoter-TSS (NM_144866) promoter-TSS (NM_144866) 90 NM_144866 225363 Mm.329353 NM_144866 ENSMUSG00000024360 Etf1 AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding common_peak1_165_1345_0.0416554857443874_10.4152904374825_0.428300331899995 chr16 78562485 78564657 + 0.428300331899995 NA intron (NR_040569, intron 2 of 2) intron (NR_040569, intron 2 of 2) 3255 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak2_23_117_0.131132418730253_6.94820925872697_0.428191034476223-2 chr11 120766616 120767406 + 0.428191034476223 NA Intergenic Intergenic 17193 NM_009053 19719 Mm.871 NM_009053 ENSMUSG00000025158 Rfng - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak2_23_117_0.131132418730253_6.94820925872697_0.428191034476223-3 chr2 91041937 91042814 + 0.428191034476223 NA intron (NM_009023, intron 3 of 7) ID_B1|SINE|B4 6748 NM_009023 19400 Mm.1272 NM_009023 ENSMUSG00000002104 Rapsn 43kDa|Nraps|Raps|rapsyn receptor-associated protein of the synapse protein-coding common_peak2_23_117_0.131132418730253_6.94820925872697_0.428191034476223 chr10 95677473 95678416 + 0.428191034476223 NA Intergenic Tigger12|DNA|TcMar-Tigger -113777 NM_027722 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak1_23_117_0.131132418730253_6.94820925872697_0.428191034476223-2 chr10 21159674 21160181 + 0.428191034476223 NA intron (NM_001198914, intron 1 of 15) CpG 1057 NM_001198914 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding common_peak1_23_117_0.131132418730253_6.94820925872697_0.428191034476223 chr1 180568977 180569512 + 0.428191034476223 NA intron (NM_007415, intron 1 of 22) CpG 269 NM_007415 11545 Mm.277779 NM_007415 ENSMUSG00000026496 Parp1 5830444G22Rik|AI893648|ARTD1|Adprp|Adprt1|C80510|PARP|PPOL|parp-1|sPARP-1 poly (ADP-ribose) polymerase family, member 1 protein-coding unique_peak2_23_117_0.131132418730253_6.94820925872697_0.428191034476223-2 chr7 123226337 123227318 + 0.428191034476223 NA intron (NM_146198, intron 1 of 16) B1_Mus1|SINE|Alu 11961 NM_146198 233836 Mm.211838 NM_146198 ENSMUSG00000030769 Slc5a11 2010013B02Rik|Kst1|RKST2|SMIT2|Slc5a10 solute carrier family 5 (sodium/glucose cotransporter), member 11 protein-coding unique_peak2_23_117_0.131132418730253_6.94820925872697_0.428191034476223 chr15 97377860 97378893 + 0.428191034476223 NA intron (NM_172293, intron 5 of 5) intron (NM_172293, intron 5 of 5) -131089 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_23_117_0.131132418730253_6.94820925872697_0.428191034476223-3 chr11 52281338 52281966 + 0.428191034476223 NA intron (NM_001313981, intron 3 of 10) intron (NM_001313981, intron 3 of 10) 943 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak2_133_1030_0.0473273939679704_10.0334923143521_0.428007439800205 chr10 95323038 95324371 + 0.428007439800205 NA intron (NM_009950, intron 1 of 2) CpG 393 NM_009950 12905 Mm.473739 NM_009950 ENSMUSG00000045867 Cradd RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding common_peak1_67_441_0.0688583239554514_8.82233172136916_0.427972823639366 chr15 60169368 60170512 + 0.427972823639366 NA Intergenic L1VL2|LINE|L1 -153322 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_127_973_0.0483122346018945_9.95193407938329_0.427815121114697 chr13 20792857 20795595 + 0.427815121114697 NA 5' UTR (NM_012054, exon 1 of 21) 5' UTR (NM_012054, exon 1 of 21) 113 NM_012054 27052 Mm.314046 NM_012054 ENSMUSG00000021322 Aoah 4930433E13Rik acyloxyacyl hydrolase protein-coding common_peak2_155_1323_-0.0445193348266439_10.3484277393939_0.427724768853472 chr9 118148233 118150713 + 0.427724768853472 NA intron (NM_026442, intron 1 of 3) intron (NM_026442, intron 1 of 3) 723 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding common_peak1_445_4731_-0.0231381731990297_12.1966652717403_0.427692821111709 chr7 16404125 16408156 + 0.427692821111709 NA intron (NM_198631, intron 1 of 13) intron (NM_198631, intron 1 of 13) 4944 NM_198631 330474 Mm.333594 NM_198631 ENSMUSG00000059273 Zc3h4 Bwq1|Gm768|Kiaa1064-hp|mKIAA1064 zinc finger CCCH-type containing 4 protein-coding common_peak1_45_269_0.0882575182290335_8.12094435616535_0.427591148517198 chr10 95501426 95502158 + 0.427591148517198 NA intron (NM_026065, intron 1 of 5) CpG 135 NM_026065 67270 Mm.30008 NM_026065 ENSMUSG00000062981 Mrpl42 2700009F22Rik|2900055D03Rik|D10Ertd322e|HSPC204|L31mt|MRP-L31|PTD007|Rpml31 mitochondrial ribosomal protein L42 protein-coding common_peak1_45_269_0.0882575182290335_8.12094435616535_0.427591148517198-2 chr8 122322574 122323343 + 0.427591148517198 NA intron (NM_009569, intron 3 of 9) intron (NM_009569, intron 3 of 9) 37788 NM_133202 170732 Mm.154808 NM_133202 ENSMUSG00000039079 Trhr2 TRH-R2 thyrotropin releasing hormone receptor 2 protein-coding common_peak2_35_228_-0.10790611503792_7.78525073057798_0.427398066892064-2 chr15 64025027 64026074 + 0.427398066892064 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 34898 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_35_228_-0.10790611503792_7.78525073057798_0.427398066892064-3 chr18 32836714 32837980 + 0.427398066892064 NA promoter-TSS (NR_045381) promoter-TSS (NR_045381) -60 NR_045381 75795 Mm.382634 NR_045381 ENSMUSG00000097553 4930455D15Rik - RIKEN cDNA 4930455D15 gene ncRNA unique_peak2_35_228_-0.10790611503792_7.78525073057798_0.427398066892064 chrX 9271836 9273281 + 0.427398066892064 NA promoter-TSS (NM_023500) promoter-TSS (NM_023500) -226 NM_023500 22439 Mm.56468 NM_023500 ENSMUSG00000015342 Xk 1810038K19Rik|XRG1|Xkh X-linked Kx blood group protein-coding common_peak2_35_228_-0.10790611503792_7.78525073057798_0.427398066892064-4 chr3 84665711 84666953 + 0.427398066892064 NA 5' UTR (NM_177260, exon 1 of 7) 5' UTR (NM_177260, exon 1 of 7) 140 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding common_peak2_35_228_-0.10790611503792_7.78525073057798_0.427398066892064 chr12 104209039 104210683 + 0.427398066892064 NA Intergenic Intergenic -4683 NM_001168294 238393 Mm.483584 NM_001033335 ENSMUSG00000066363 Serpina3f 2A1|BC049975 serine (or cysteine) peptidase inhibitor, clade A, member 3F protein-coding common_peak1_17_81_0.147133357254583_6.43111868324538_0.427349612160519-3 chr15 77851148 77851589 + 0.427349612160519 NA Intergenic Intergenic -9193 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_17_81_0.147133357254583_6.43111868324538_0.427349612160519 chr1 87652058 87652499 + 0.427349612160519 NA intron (NR_122078, intron 2 of 27) RLTR11A2|LTR|ERVK 31966 NM_001110193 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_17_81_0.147133357254583_6.43111868324538_0.427349612160519-4 chr9 69449959 69450335 + 0.427349612160519 NA Intergenic B4|SINE|B4 -3536 NM_007585 12306 Mm.238343 NM_007585 ENSMUSG00000032231 Anxa2 AW215814|Cal1h annexin A2 protein-coding unique_peak2_17_81_0.147133357254583_6.43111868324538_0.427349612160519 chr16 36708423 36709096 + 0.427349612160519 NA intron (NM_134109, intron 2 of 7) intron (NM_134109, intron 2 of 7) 14781 NM_001285791 106347 Mm.17807 NM_134109 ENSMUSG00000022900 Ildr1 AU041483|AU044638 immunoglobulin-like domain containing receptor 1 protein-coding common_peak1_17_81_0.147133357254583_6.43111868324538_0.427349612160519-2 chr14 25768390 25768783 + 0.427349612160519 NA intron (NM_001101433, intron 1 of 3) CpG 270 NM_001101433 71918 Mm.41904 NM_001101433 ENSMUSG00000055538 Zcchc24 2310047A01Rik zinc finger, CCHC domain containing 24 protein-coding common_peak1_41_240_0.0911976187548929_7.95848814560741_0.427323347124661 chr15 75841293 75841968 + 0.427323347124661 NA intron (NM_172121, intron 1 of 11) CpG 278 NM_172121 223642 Mm.209800 NM_172121 ENSMUSG00000075600 Zc3h3 BC049953|Kiaa0150|Smicl|Zc3hdc3 zinc finger CCCH type containing 3 protein-coding unique_peak2_41_240_0.0911976187548929_7.95848814560741_0.427323347124661 chr4 123574857 123576424 + 0.427323347124661 NA intron (NM_001199137, intron 1 of 92) B1_Mus1|SINE|Alu -40780 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak2_51_354_-0.0896416585647568_8.42685438510967_0.427296178642727 chr11 120491331 120492561 + 0.427296178642727 NA 5' UTR (NM_013770, exon 1 of 11) 5' UTR (NM_013770, exon 1 of 11) 109 NM_013770 27376 Mm.3991 NM_013770 ENSMUSG00000025792 Slc25a10 Dic solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10 protein-coding common_peak1_51_354_-0.0896416585647568_8.42685438510967_0.427296178642727 chr3 19429182 19430096 + 0.427296178642727 NA Intergenic Intergenic -78956 NM_001163536 66326 Mm.45615 NM_025489 ENSMUSG00000027606 Dnajc5b 1700008A05Rik DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding common_peak1_472_4929_0.0217366521165268_12.2782402573235_0.427288773518282 chr1 155096335 155099691 + 0.427288773518282 NA 3' UTR (NM_010500, exon 1 of 1) 3' UTR (NM_010500, exon 1 of 1) 1623 NM_010500 15939 Mm.12246 NM_010500 ENSMUSG00000056708 Ier5 - immediate early response 5 protein-coding common_peak2_166_1356_0.0405416002691048_10.4264758055534_0.427282837207616 chr6 142756401 142758483 + 0.427282837207616 NA intron (NM_009908, intron 1 of 7) intron (NM_009908, intron 1 of 7) 756 NM_009908 12764 Mm.3820 NM_009908 ENSMUSG00000030282 Cmas AW208911|CMPNeu5Ac|D6Bwg0250e cytidine monophospho-N-acetylneuraminic acid synthetase protein-coding common_peak1_58_369_0.0741449445255125_8.56845393277907_0.427214652984004 chrX 159371993 159372902 + 0.427214652984004 NA intron (NM_025437, intron 1 of 6) CpG 252 NM_025437 66235 Mm.294623 NM_025437 ENSMUSG00000067194 Eif1ax 1500010B24Rik|AI426898|Eif1ay eukaryotic translation initiation factor 1A, X-linked protein-coding common_peak1_194_1644_0.0371771678635771_10.7024604525544_0.427203248196616 chr18 67774405 67775808 + 0.427203248196616 NA TTS (NR_045376) TTS (NR_045376) 230 NM_001039088 72124 Mm.307315 NM_028112 ENSMUSG00000079614 Seh1l 2610007A16Rik|AW540070|SEC13L|SEH1A|SEH1B|Seh1 SEH1-like (S. cerevisiae protein-coding common_peak2_194_1644_0.0371771678635771_10.7024604525544_0.427203248196616 chr2 121169773 121171979 + 0.427203248196616 NA promoter-TSS (NM_153387) promoter-TSS (NM_153387) 249 NM_001290819 99334 Mm.188422 NM_178889 ENSMUSG00000050619 Zscan29 AW125441|Zfp690 zinc finger SCAN domains 29 protein-coding common_peak2_239_2128_0.0325331317044775_11.0722268003045_0.427105309723072 chr2 32161120 32168519 + 0.427105309723072 NA intron (NM_001159634, intron 1 of 31) intron (NM_001159634, intron 1 of 31) 13671 NM_001159634 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak1_47_321_-0.090529098836166_8.28565232869654_0.426876400684922 chr14 60717438 60718300 + 0.426876400684922 NA intron (NM_001033272, intron 4 of 12) B2_Mm2|SINE|B2 -15035 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak2_47_321_-0.090529098836166_8.28565232869654_0.426876400684922 chr8 46470925 46471884 + 0.426876400684922 NA intron (NM_007981, intron 1 of 20) CpG 367 NM_007981 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding common_peak2_20_99_0.133618454023773_6.71066541678661_0.42680492478798 chr1 131245233 131245861 + 0.42680492478798 NA promoter-TSS (NM_001313731) promoter-TSS (NM_001313731) -369 NM_001313731 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding unique_peak2_20_99_0.133618454023773_6.71066541678661_0.42680492478798 chr4 41568914 41569560 + 0.42680492478798 NA promoter-TSS (NM_175138) promoter-TSS (NM_175138) 290 NM_001159583 71901 Mm.39215 NM_027993 ENSMUSG00000028439 Fam219a 2310028H24Rik family with sequence similarity 219, member A protein-coding common_peak1_20_99_0.133618454023773_6.71066541678661_0.42680492478798 chr2 127008985 127009422 + 0.42680492478798 NA intron (NM_175550, intron 1 of 20) B1_Mus1|SINE|Alu 492 NM_175550 108011 Mm.134045 NM_175550 ENSMUSG00000001998 Ap4e1 2310033A20Rik|9930028M04Rik|AV087807 adaptor-related protein complex AP-4, epsilon 1 protein-coding unique_peak2_20_99_0.133618454023773_6.71066541678661_0.42680492478798-2 chr4 148683338 148684175 + 0.42680492478798 NA Intergenic Intergenic 40439 NM_001085505 230909 Mm.332067 NM_001085505 ENSMUSG00000070577 Gm572 b2b1167Clo predicted gene 572 protein-coding common_peak2_90_691_-0.0622831849166783_9.40348663517839_0.426772663914617 chr8 70522249 70523957 + 0.426772663914617 NA promoter-TSS (NM_029366) promoter-TSS (NM_029366) 77 NM_029366 75620 Mm.482129 NM_029366 ENSMUSG00000055553 Kxd1 0610030B01Rik|2810422J05Rik|C78305 KxDL motif containing 1 protein-coding common_peak1_90_691_-0.0622831849166783_9.40348663517839_0.426772663914617 chr5 147050214 147051859 + 0.426772663914617 NA intron (NM_080795, intron 1 of 9) intron (NM_080795, intron 1 of 9) 25536 NM_080795 140887 Mm.272203 NM_080795 ENSMUSG00000016520 Lnx2 9630046H24|AW209022 ligand of numb-protein X 2 protein-coding common_peak2_419_4397_-0.0238270358054375_12.0907183709522_0.42652023165693 chr5 23717002 23723318 + 0.42652023165693 NA Intergenic MLTR18_MM|LTR|ERVK -7493 NR_015554 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak2_85_645_-0.0630508732536192_9.30386491806711_0.42637631252547 chr4 116684968 116686509 + 0.42637631252547 NA non-coding (NR_040442, exon 2 of 3) intron (NM_011034, intron 1 of 5) 139 NM_011034 18477 Mm.30929 NM_011034 ENSMUSG00000028691 Prdx1 MSP23|NkefA|OSF-3|OSF3|PAG|Paga|PrdxI|PrxI|TDX2|TPxA|Tdpx2|prx1 peroxiredoxin 1 protein-coding common_peak1_85_645_-0.0630508732536192_9.30386491806711_0.42637631252547 chr19 11120807 11121958 + 0.42637631252547 NA intron (NM_027058, intron 1 of 6) intron (NM_027058, intron 1 of 6) 9496 NM_027058 69369 Mm.391200 NM_027058 ENSMUSG00000024729 1700017D01Rik - RIKEN cDNA 1700017D01 gene protein-coding common_peak1_65_470_-0.0756509907655474_8.84175775423001_0.426311279888186 chr11 5485620 5486325 + 0.426311279888186 NA Intergenic Intergenic -34669 NM_013842 22433 Mm.469937 NM_013842 ENSMUSG00000020484 Xbp1 D11Ertd39e|TREB-5|TREB5|XBP-1 X-box binding protein 1 protein-coding common_peak1_65_470_-0.0756509907655474_8.84175775423001_0.426311279888186-2 chr4 70535026 70535918 + 0.426311279888186 NA promoter-TSS (NM_172694) promoter-TSS (NM_172694) -544 NM_172694 230316 Mm.251188 NM_172694 ENSMUSG00000039270 Megf9 4933405H16Rik|9630025C07|Egfl5|mKIAA0818 multiple EGF-like-domains 9 protein-coding common_peak1_289_2691_0.0289185179669271_11.4089219535938_0.426257245383575 chr5 113841013 113843658 + 0.426257245383575 NA TTS (NM_011779) TTS (NM_011779) -11834 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak1_170_1478_-0.0417731013956093_10.5095197864013_0.426256941946375 chr7 28788160 28790498 + 0.426256941946375 NA TTS (NM_001122765) TTS (NM_001122765) 360 NM_177158 320435 Mm.74632 NM_177158 ENSMUSG00000051735 Rinl 5830482F20Rik|9930116N10Rik Ras and Rab interactor-like protein-coding common_peak1_28_177_-0.127070116453829_7.41219837273948_0.426244390935736 chr1 40497730 40498383 + 0.426244390935736 NA intron (NM_008365, intron 10 of 10) MIR|SINE|MIR -17306 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak1_28_177_-0.127070116453829_7.41219837273948_0.426244390935736-3 chr2 105904081 105904513 + 0.426244390935736 NA promoter-TSS (NM_028260) promoter-TSS (NM_028260) 267 NM_023876 77766 Mm.3608 NM_023876 ENSMUSG00000027167 Elp4 A330107A17Rik|Paxneb elongator acetyltransferase complex subunit 4 protein-coding common_peak1_28_177_-0.127070116453829_7.41219837273948_0.426244390935736-2 chr10 117804847 117805391 + 0.426244390935736 NA Intergenic PB1D10|SINE|Alu -12414 NM_134010 103468 Mm.12568 NM_134010 ENSMUSG00000052798 Nup107 AW541137|C76801 nucleoporin 107 protein-coding common_peak2_30_163_0.109130200116223_7.4121171046762_0.426244390935686 chr10 125388535 125389727 + 0.426244390935686 NA Intergenic CpG -60596 NM_011391 20503 Mm.29161 NM_011391 ENSMUSG00000020102 Slc16a7 4921534N07Rik|Mct2 solute carrier family 16 (monocarboxylic acid transporters), member 7 protein-coding common_peak1_30_163_0.109130200116223_7.4121171046762_0.426244390935686-2 chr5 31054642 31055272 + 0.426244390935686 NA TTS (NM_027855) TTS (NM_027855) 177 NM_001289522 69719 Mm.305535 NM_023525 ENSMUSG00000013629 Cad 2410008J01Rik|AU018859|Cpad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase protein-coding common_peak1_30_163_0.109130200116223_7.4121171046762_0.426244390935686 chr11 64204526 64205038 + 0.426244390935686 NA Intergenic L1MD2|LINE|L1 125298 NR_033780 66456 Mm.124828 NR_033780 ENSMUSG00000087497 2810001G20Rik AW045514 RIKEN cDNA 2810001G20 gene ncRNA common_peak2_43_290_-0.0984652890279758_8.1356426983943_0.426239497008355 chr3 146450193 146451203 + 0.426239497008355 NA intron (NM_001293672, intron 1 of 6) intron (NM_001293672, intron 1 of 6) 231 NM_001293672 74245 Mm.45396 NM_028836 ENSMUSG00000028189 Ctbs 2210401K11Rik|CTB chitobiase, di-N-acetyl- protein-coding common_peak1_68_449_0.0688141290297573_8.84818825573192_0.425767056674155 chr7 67645413 67645992 + 0.425767056674155 NA promoter-TSS (NR_028144) promoter-TSS (NR_028144) -466 NR_028143 67867 Mm.31247 NM_027413 ENSMUSG00000030556 Lrrc28 1300004K21Rik|2210012C09Rik|2310058O11Rik leucine rich repeat containing 28 protein-coding common_peak2_229_2116_-0.0346268518494046_11.0304921280829_0.425673182346122 chr5 22548678 22551078 + 0.425673182346122 NA promoter-TSS (NR_102315) promoter-TSS (NR_102315) 453 NM_011959 26429 Mm.412217 NM_011959 ENSMUSG00000029012 Orc5 AL033327|MmORC5|Orc5l origin recognition complex, subunit 5 protein-coding common_peak1_78_532_0.06410736835414_9.09004540693625_0.425666312433406-3 chr17 56199900 56200195 + 0.425666312433406 NA intron (NM_172624, intron 10 of 20) (CATTC)n|Simple_repeat|Simple_repeat -16127 NM_080837 28106 Mm.294870 NM_080837 ENSMUSG00000019579 Mydgf D17Wsu104e|Il25|Ly6elg myeloid derived growth factor protein-coding common_peak1_78_532_0.06410736835414_9.09004540693625_0.425666312433406 chr1 43241528 43242673 + 0.425666312433406 NA Intergenic Intergenic -45339 NM_001289533 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding common_peak1_78_532_0.06410736835414_9.09004540693625_0.425666312433406-2 chr13 104610095 104611345 + 0.425666312433406 NA Intergenic Intergenic 206233 NM_026072 67285 Mm.235398 NM_026072 ENSMUSG00000021715 Cwc27 3110009E13Rik|NY-CO-10|Sdccag10 CWC27 spliceosome-associated protein protein-coding common_peak1_299_2806_0.0285609821498554_11.4690938395875_0.425482857511465 chr13 114906846 114909615 + 0.425482857511465 NA intron (NM_008396, intron 1 of 29) MLT1C|LTR|ERVL-MaLR 23811 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak1_384_3955_-0.0249995831077232_11.9373269192052_0.425317362869228 chr13 58400866 58403806 + 0.425317362869228 NA promoter-TSS (NM_001168248) promoter-TSS (NM_001168248) 88 NR_031761 74386 Mm.85289 NM_028904 ENSMUSG00000035367 Rmi1 4932432N11Rik|C79893 RecQ mediated genome instability 1 protein-coding common_peak2_94_671_0.0561523674964519_9.42039360652699_0.425303930665358-2 chr7 27978517 27979723 + 0.425303930665358 NA promoter-TSS (NM_001081021) promoter-TSS (NM_001081021) 37 NM_001081021 338354 Mm.389873 NM_001081021 ENSMUSG00000063047 Zfp780b B230208L21Rik zinc finger protein 780B protein-coding common_peak2_94_671_0.0561523674964519_9.42039360652699_0.425303930665358 chr15 73060154 73061970 + 0.425303930665358 NA 5' UTR (NM_180662, exon 1 of 22) 5' UTR (NM_180662, exon 1 of 22) 142 NM_001164641 76510 Mm.158902 NM_029640 ENSMUSG00000047921 Trappc9 1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882 trafficking protein particle complex 9 protein-coding common_peak2_222_2038_-0.0351621860621929_10.9760649669855_0.425240294782861 chr11 101640881 101644505 + 0.425240294782861 NA Intergenic B1_Mus1|SINE|Alu 14744 NM_025654 66599 Mm.41449 NM_025654 ENSMUSG00000010362 Rdm1 2410008M22Rik|AW212028|Rad52b RAD52 motif 1 protein-coding common_peak2_102_802_-0.0577082937405748_9.62040203064703_0.425200485583985 chr1 87875279 87879222 + 0.425200485583985 NA intron (NM_177646, intron 1 of 29) (TATG)n|Simple_repeat|Simple_repeat 23963 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak2_123_936_0.0480015894478321_9.8959060323831_0.425169194434718 chr5 123748015 123750190 + 0.425169194434718 NA promoter-TSS (NM_001042421) promoter-TSS (NM_001042421) 312 NM_001005525 208606 Mm.276341 NM_025438 ENSMUSG00000029422 Rsrc2 1500011J06Rik arginine/serine-rich coiled-coil 2 protein-coding common_peak1_50_307_0.0808842364325546_8.30722865891118_0.424887703622693 chr2 70091735 70092448 + 0.424887703622693 NA intron (NM_177376, intron 2 of 34) RLTR35B_MM|LTR|ERVL 52965 NM_177376 329421 Mm.99648 NM_177376 ENSMUSG00000042064 Myo3b A430065P19Rik myosin IIIB protein-coding unique_peak2_34_190_0.104016886487785_7.62943727127964_0.424751207951935 chr4 122880047 122881442 + 0.424751207951935 NA intron (NM_007598, intron 1 of 12) MTC|LTR|ERVL-MaLR 5313 NM_007598 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak1_34_190_0.104016886487785_7.62943727127964_0.424751207951935 chr15 27466676 27467303 + 0.424751207951935 NA 5' UTR (NM_020332, exon 1 of 12) 5' UTR (NM_020332, exon 1 of 12) 312 NM_020332 11732 Mm.265264 NM_020332 ENSMUSG00000022265 Ank Ankh|D15Ertd221e|ank|mKIAA1581 progressive ankylosis protein-coding common_peak2_100_724_0.0550110087031612_9.52934268925388_0.424681021475893 chr13 36116729 36118493 + 0.424681021475893 NA promoter-TSS (NM_001039189) promoter-TSS (NM_001039189) -32 NM_024274 69955 Mm.70690 NM_024274 ENSMUSG00000021420 Fars2 Fars1|pheRS phenylalanine-tRNA synthetase 2 (mitochondrial) protein-coding common_peak1_120_973_-0.0512111174468934_9.90217240335889_0.424650003466428-2 chr19 41980438 41982214 + 0.424650003466428 NA promoter-TSS (NM_145500) promoter-TSS (NM_145500) -190 NM_028152 72199 Mm.218940 NM_028152 ENSMUSG00000025159 Mms19 2410001K24Rik|2610042O15Rik|AI316855|C79368|C86341|Mms19l MMS19 (MET18 S. cerevisiae) protein-coding common_peak1_120_973_-0.0512111174468934_9.90217240335889_0.424650003466428 chr1 72243759 72244801 + 0.424650003466428 NA Intergenic U2|snRNA|snRNA -31973 NM_001005423 381269 Mm.422636 NM_001005423 ENSMUSG00000039395 Mreg Gm974|Wdt2|dsu melanoregulin protein-coding common_peak2_367_3744_-0.0258399545071821_11.8578300260925_0.424626764891252 chr13 55441382 55448315 + 0.424626764891252 NA promoter-TSS (NM_001286066) promoter-TSS (NM_001286066) -224 NM_001286063 26385 Mm.10193 NM_011938 ENSMUSG00000074886 Grk6 Gprk6 G protein-coupled receptor kinase 6 protein-coding common_peak2_86_654_-0.0625532657589591_9.32407446354533_0.424614743210728 chr19 7381949 7383702 + 0.424614743210728 NA promoter-TSS (NR_045703) promoter-TSS (NR_045703) -178 NR_045703 654802 Mm.414924 NR_045703 1700105P06Rik - RIKEN cDNA 1700105P06 gene ncRNA common_peak1_86_654_-0.0625532657589591_9.32407446354533_0.424614743210728 chr1 54846267 54847973 + 0.424614743210728 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 79267 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_86_654_-0.0625532657589591_9.32407446354533_0.424614743210728-2 chrX 52987488 52989055 + 0.424614743210728 NA intron (NM_013556, intron 1 of 8) CpG 193 NM_013556 15452 Mm.299381 NM_013556 ENSMUSG00000025630 Hprt C81579|HPGRT|Hprt1 hypoxanthine guanine phosphoribosyl transferase protein-coding common_peak2_89_627_0.0581701998593598_9.32370584882131_0.424614743210728 chr11 48825363 48827223 + 0.424614743210728 NA intron (NM_053166, intron 1 of 6) intron (NM_053166, intron 1 of 6) 155 NM_053166 94089 Mm.390335 NM_053166 ENSMUSG00000040350 Trim7 AI790312 tripartite motif-containing 7 protein-coding common_peak2_59_377_0.0730263195629881_8.59875558400257_0.424608905770382-2 chr8 94214244 94215371 + 0.424608905770382 NA intron (NM_172410, intron 1 of 22) CpG 206 NM_172410 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding common_peak2_59_377_0.0730263195629881_8.59875558400257_0.424608905770382 chr1 127229804 127231417 + 0.424608905770382 NA intron (NM_145128, intron 1 of 17) intron (NM_145128, intron 1 of 17) 25624 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak2_149_1186_0.0436577998341185_10.234933119559_0.42443649705976 chr9 61913664 61915469 + 0.42443649705976 NA promoter-TSS (NM_018853) promoter-TSS (NM_018853) -56 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_239_2228_-0.0336875351029811_11.1053371337083_0.424243739379162 chr1 180811944 180813697 + 0.424243739379162 NA intron (NM_008210, intron 1 of 3) CpG 785 NM_008210 15078 Mm.138832 NM_008210 ENSMUSG00000060743 H3f3a H3.3A H3 histone, family 3A protein-coding common_peak2_130_1002_0.0469813712346916_9.99359657622953_0.424206568801428 chr2 34870355 34871985 + 0.424206568801428 NA promoter-TSS (NM_080554) promoter-TSS (NM_080554) -208 NM_080554 66998 Mm.270632 NM_080554 ENSMUSG00000026869 Psmd5 1500032A03Rik|AW475925|S5b|W91691|mKIAA0072 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 protein-coding common_peak2_152_1292_-0.0447012665295148_10.3141559265455_0.424192705320888 chr17 15009150 15010961 + 0.424192705320888 NA 5' UTR (NM_198104, exon 1 of 4) 5' UTR (NM_198104, exon 1 of 4) 129 NM_001123368 100041586 Mm.440445 NM_001123368 ENSMUSG00000079710 Gm3417 - predicted gene 3417 protein-coding common_peak2_66_478_-0.0733381455864563_8.86721277294295_0.424162394253057 chr8 119777712 119779111 + 0.424162394253057 NA promoter-TSS (NM_028883) promoter-TSS (NM_028883) 5 NM_028883 74347 Mm.358759 NM_028883 ENSMUSG00000034105 Tldc1 4632415K11Rik|Kiaa1609 TBC/LysM associated domain containing 1 protein-coding unique_peak2_32_206_-0.116167009838446_7.6354034525801_0.424127629669328 chr4 129877116 129878281 + 0.424127629669328 NA Intergenic MLTR14|LTR|ERV1 -28528 NR_045190 319894 Mm.59196 NR_045190 ENSMUSG00000086369 E330017L17Rik - RIKEN cDNA E330017L17 gene ncRNA common_peak1_32_206_-0.116167009838446_7.6354034525801_0.424127629669328-3 chrX 53370019 53370572 + 0.424127629669328 NA intron (NM_001290514, intron 1 of 5) intron (NM_001290514, intron 1 of 5) 264 NM_027409 70380 Mm.491083 NM_027409 ENSMUSG00000023074 Mospd1 1810018L05Rik motile sperm domain containing 1 protein-coding common_peak1_32_206_-0.116167009838446_7.6354034525801_0.424127629669328 chr1 39922631 39923245 + 0.424127629669328 NA intron (NM_001252200, intron 2 of 31) intron (NM_001252200, intron 2 of 31) 22025 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding common_peak1_32_206_-0.116167009838446_7.6354034525801_0.424127629669328-2 chr7 90023222 90023924 + 0.424127629669328 NA Intergenic Intergenic -5586 NR_110365 319711 Mm.31753 NR_015614 ENSMUSG00000097585 E230029C05Rik AI452102|B230337J15 RIKEN cDNA E230029C05 gene ncRNA common_peak1_13_76_-0.206834101863331_6.16336948976324_0.424110812404971-2 chr3 108653340 108653698 + 0.424110812404971 NA promoter-TSS (NM_001177770) promoter-TSS (NM_001177770) -394 NM_145543 229725 Mm.214545 NM_145543 ENSMUSG00000027884 Clcc1 Mclc chloride channel CLIC-like 1 protein-coding common_peak1_13_76_-0.206834101863331_6.16336948976324_0.424110812404971-3 chr4 133159977 133160341 + 0.424110812404971 NA intron (NM_153423, intron 1 of 8) intron (NM_153423, intron 1 of 8) 29526 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding unique_peak2_13_76_-0.206834101863331_6.16336948976324_0.424110812404971-2 chr5 73191675 73192361 + 0.424110812404971 NA intron (NM_028194, intron 3 of 62) intron (NM_028194, intron 3 of 62) 64600 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_13_76_-0.206834101863331_6.16336948976324_0.424110812404971 chr14 75833509 75833872 + 0.424110812404971 NA Intergenic Intergenic 11274 NR_045294 100043189 Mm.426329 NR_045294 Gm4285 - predicted gene 4285 ncRNA common_peak2_13_76_-0.206834101863331_6.16336948976324_0.424110812404971 chr2 144550440 144550909 + 0.424110812404971 NA intron (NM_015754, intron 1 of 4) intron (NM_015754, intron 1 of 4) 185 NM_015754 26450 Mm.440564 NM_015754 ENSMUSG00000027428 Rbbp9 Bog retinoblastoma binding protein 9 protein-coding unique_peak2_13_76_-0.206834101863331_6.16336948976324_0.424110812404971 chr18 84090587 84091244 + 0.424110812404971 NA intron (NM_146090, intron 1 of 1) intron (NM_146090, intron 1 of 1) 2757 NM_146090 225791 Mm.147052 NM_146090 ENSMUSG00000049090 Zadh2 C530046K17Rik|PTGR-3|Pthr3 zinc binding alcohol dehydrogenase, domain containing 2 protein-coding common_peak2_38_218_0.0981563900066869_7.82386525460452_0.424041740815944 chr7 44467510 44468562 + 0.424041740815944 NA promoter-TSS (NM_025368) promoter-TSS (NM_025368) 56 NM_001205070 66124 Mm.358691 NM_025368 ENSMUSG00000038695 Josd2 1110007C05Rik Josephin domain containing 2 protein-coding common_peak1_124_945_0.0484244056753091_9.90990857617705_0.424007090431374 chr10 81128994 81130257 + 0.424007090431374 NA Intergenic Intergenic -6646 NM_010731 16969 Mm.20920 NM_010731 ENSMUSG00000035011 Zbtb7a 9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7 zinc finger and BTB domain containing 7a protein-coding common_peak2_156_1256_0.0417066999851414_10.3166222844131_0.423999494599406 chr10 40384689 40387126 + 0.423999494599406 NA intron (NM_001291816, intron 1 of 11) Lx9|LINE|L1 36599 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak1_244_2183_0.0322246828691526_11.1088694823544_0.423964710809779 chr11 97829048 97831173 + 0.423964710809779 NA intron (NM_010688, intron 4 of 6) intron (NM_010688, intron 4 of 6) -10670 NM_001080935 68127 Mm.110270 NM_001080935 ENSMUSG00000050538 B230217C12Rik AI840637 RIKEN cDNA B230217C12 gene protein-coding common_peak1_397_4118_-0.0244843058344806_11.995836257951_0.42396099972052 chr3 90264511 90267144 + 0.42396099972052 NA promoter-TSS (NM_201407) promoter-TSS (NM_201407) -687 NM_201407 229541 Mm.30571 NM_201407 ENSMUSG00000042404 Dennd4b - DENN/MADD domain containing 4B protein-coding common_peak1_133_1100_-0.0474427422282897_10.0808773824502_0.423901569829001 chr14 20733597 20735014 + 0.423901569829001 NA TTS (NM_001039138) TTS (NM_001039138) 257 NM_010811 17423 Mm.4084 NM_010811 ENSMUSG00000039308 Ndst2 Mndns|NDST-2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 protein-coding common_peak1_42_247_0.0915308598670759_7.99996174032041_0.423861959892927-2 chr4 152297313 152297906 + 0.423861959892927 NA intron (NR_037908, intron 1 of 5) (CCGGA)n|Simple_repeat|Simple_repeat 395 NM_133788 57295 Mm.277464 NM_133788 ENSMUSG00000039662 Icmt 1700008E11Rik|C80758|Gm13095|HSTE14|OTTMUSG00000010406|PPMT|STE14|pcCMT isoprenylcysteine carboxyl methyltransferase protein-coding common_peak1_42_247_0.0915308598670759_7.99996174032041_0.423861959892927 chr19 11571136 11571860 + 0.423861959892927 NA Intergenic Intergenic 33306 NM_026835 68774 Mm.290390 NM_026835 ENSMUSG00000024679 Ms4a6d 1110058E16Rik|AI447446|Ms4a11 membrane-spanning 4-domains, subfamily A, member 6D protein-coding common_peak1_42_247_0.0915308598670759_7.99996174032041_0.423861959892927-3 chr5 115514444 115515176 + 0.423861959892927 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 8134 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding unique_peak2_42_247_0.0915308598670759_7.99996174032041_0.423861959892927 chr17 35200648 35202136 + 0.423861959892927 NA intron (NM_013693, intron 1 of 3) intron (NM_013693, intron 1 of 3) 615 NM_013693 21926 Mm.1293 NM_013693 ENSMUSG00000024401 Tnf DIF|TNF-a|TNF-alpha|TNFSF2|TNFalpha|Tnfa|Tnfsf1a|Tnlg1f tumor necrosis factor protein-coding common_peak1_76_565_-0.067936702058816_9.11068989180247_0.423861313401152 chr15 76204338 76205502 + 0.423861313401152 NA intron (NM_011117, intron 1 of 31) intron (NM_011117, intron 1 of 31) 1401 NM_201389 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_76_565_-0.067936702058816_9.11068989180247_0.423861313401152-2 chr5 142464014 142464700 + 0.423861313401152 NA intron (NM_172725, intron 1 of 16) intron (NM_172725, intron 1 of 16) 426 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding common_peak2_584_6581_-0.0191267584848855_12.6747469318819_0.423852921068049 chr9 61677650 61684055 + 0.423852921068049 NA Intergenic MIR3|SINE|MIR 233658 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_64_417_0.069555388252013_8.74213682620689_0.423823030736816 chr2 38643215 38644170 + 0.423823030736816 NA intron (NM_011187, intron 1 of 7) CpG 214 NM_011187 19177 Mm.389251 NM_011187 ENSMUSG00000026750 Psmb7 AU020723|MC14 proteasome (prosome, macropain) subunit, beta type 7 protein-coding common_peak1_25_156_-0.139199504250695_7.22502099676628_0.423804090989636 chr2 158687638 158688244 + 0.423804090989636 NA intron (NM_001159662, intron 1 of 10) intron (NM_001159662, intron 1 of 10) 20806 NM_001159662 228852 Mm.150540 NM_153089 ENSMUSG00000037754 Ppp1r16b ANKRD4|C130078N17Rik|TIMAP|Wdt4 protein phosphatase 1, regulatory (inhibitor) subunit 16B protein-coding unique_peak2_27_143_0.116639748575613_7.22824487573012_0.423804090989636 chr13 107094647 107095649 + 0.423804090989636 NA Intergenic Intergenic 72578 NR_015471 100040322 Mm.133867 NR_015471 3830408C21Rik - RIKEN cDNA 3830408C21 gene ncRNA unique_peak2_27_143_0.116639748575613_7.22824487573012_0.423804090989636-2 chr2 91944263 91945359 + 0.423804090989636 NA TTS (NR_105965) TTS (NR_105965) 119 NR_105965 102465604 NR_105965 ENSMUSG00000098651 Mir6999 Gm27673|mmu-mir-6999 microRNA 6999 ncRNA common_peak2_95_680_0.0554891024527358_9.43925553923844_0.423692088922019 chr1 64616359 64618191 + 0.423692088922019 NA promoter-TSS (NM_025964) promoter-TSS (NM_025964) -107 NM_025964 67099 Mm.46394 NM_025964 ENSMUSG00000025956 Mettl21a 2310038H17Rik|AI464204|Fam119a methyltransferase like 21A protein-coding common_peak1_347_3373_0.0257781947509983_11.7331333556631_0.423639503978262 chr4 102568614 102571704 + 0.423639503978262 NA promoter-TSS (NM_001177980) promoter-TSS (NM_001177980) 99 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak2_69_457_0.0688542376129462_8.87363090690342_0.423636643169603 chr19 60811068 60812455 + 0.423636643169603 NA intron (NM_026437, intron 1 of 8) CpG 191 NM_001167829 67894 Mm.26148 NM_026437 ENSMUSG00000024993 Fam45a 1810055E12Rik family with sequence similarity 45, member A protein-coding common_peak2_146_1231_-0.0457757876309337_10.2438986468794_0.4236222051937 chr8 94666000 94667866 + 0.4236222051937 NA promoter-TSS (NM_024269) promoter-TSS (NM_024269) -158 NM_024269 107566 Mm.393247 NM_024191 ENSMUSG00000031776 Arl2bp 1700010P10Rik|1700027H16Rik|6330544B05Rik|AI482273|AI849834|BART|Bart1 ADP-ribosylation factor-like 2 binding protein protein-coding common_peak1_206_1771_0.0355669478450604_10.8089463624775_0.42362121337513 chr7 35554769 35556329 + 0.42362121337513 NA exon (NM_033080, exon 1 of 3) exon (NM_033080, exon 1 of 3) 379 NM_033080 110959 Mm.410206 NM_033080 ENSMUSG00000034875 Nudt19 D7Rp2|D7Rp2-r|D7Rp2-s|D7Rp2e|RP2-r|RP2-s nudix (nucleoside diphosphate linked moiety X)-type motif 19 protein-coding common_peak1_55_345_0.0785488335675559_8.4739026444205_0.423382653439925 chr14 54478959 54480082 + 0.423382653439925 NA exon (NM_080726, exon 5 of 5) exon (NM_080726, exon 5 of 5) 3420 NM_080726 140743 Mm.274727 NM_080726 ENSMUSG00000022176 Rem2 AW411893 rad and gem related GTP binding protein 2 protein-coding common_peak2_448_4768_-0.0225114132518254_12.2082153607684_0.423315647625366 chr10 108160682 108164389 + 0.423315647625366 NA exon (NM_027892, exon 1 of 26) exon (NM_027892, exon 1 of 26) 135 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding unique_peak2_44_297_-0.0929898828975304_8.1726735790134_0.423195206892787 chr11 113787909 113789449 + 0.423195206892787 NA intron (NM_172800, intron 44 of 44) intron (NM_172800, intron 44 of 44) -36864 NM_001163346 56699 Mm.293378 NM_020006 ENSMUSG00000041598 Cdc42ep4 1500041M20Rik|Borg4|CEP4 CDC42 effector protein (Rho GTPase binding) 4 protein-coding common_peak1_12_53_0.173921431291109_5.84184821780902_0.423037473498586-2 chr15 79959041 79959319 + 0.423037473498586 NA Intergenic Intergenic -26534 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak2_12_53_0.173921431291109_5.84184821780902_0.423037473498586 chr14 79425872 79426367 + 0.423037473498586 NA promoter-TSS (NM_001024135) promoter-TSS (NM_001024135) -392 NM_001024135 211255 Mm.284526 NM_001024135 ENSMUSG00000043881 Kbtbd7 1110008P08Rik|AU045792|Gm295 kelch repeat and BTB (POZ) domain containing 7 protein-coding common_peak1_12_53_0.173921431291109_5.84184821780902_0.423037473498586 chr1 165680788 165681118 + 0.423037473498586 NA intron (NM_178593, intron 1 of 6) B4A|SINE|B4 27141 NM_178593 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding common_peak1_12_53_0.173921431291109_5.84184821780902_0.423037473498586-3 chr9 63713440 63713803 + 0.423037473498586 NA intron (NM_016769, intron 1 of 8) B4A|SINE|B4 44373 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_131_1012_0.0461261112324536_10.0074815144174_0.423009408096169 chr13 104816470 104818195 + 0.423009408096169 NA promoter-TSS (NM_026072) promoter-TSS (NM_026072) 93 NM_026075 67288 Mm.125465 NM_026075 ENSMUSG00000021716 Srek1ip1 3110031B13Rik|AI462702|AV348305|AW121048|Sfrs12ip1|Srsf12ip1 splicing regulatory glutamine/lysine-rich protein 1interacting protein 1 protein-coding common_peak1_36_236_-0.108959597686849_7.83426345005483_0.422962245287548 chr11 34737419 34738350 + 0.422962245287548 NA intron (NM_033374, intron 2 of 51) intron (NM_033374, intron 2 of 51) 46021 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding common_peak1_36_236_-0.108959597686849_7.83426345005483_0.422962245287548-2 chr14 74731973 74732874 + 0.422962245287548 NA 5' UTR (NM_001285423, exon 1 of 9) 5' UTR (NM_001285423, exon 1 of 9) 126 NM_016903 13885 Mm.38055 NM_016903 ENSMUSG00000021996 Esd Es-10|Es10|FGH|sid478 esterase D/formylglutathione hydrolase protein-coding common_peak1_40_266_-0.0992526666221289_8.01106959837649_0.422907577102962 chr15 78566307 78567178 + 0.422907577102962 NA intron (NM_009008, intron 2 of 6) intron (NM_009008, intron 2 of 6) 6041 NM_009008 19354 Mm.1972 NM_009008 ENSMUSG00000033220 Rac2 AI323801|AI452260 RAS-related C3 botulinum substrate 2 protein-coding common_peak1_40_266_-0.0992526666221289_8.01106959837649_0.422907577102962-2 chr19 14588179 14588934 + 0.422907577102962 NA intron (NM_001302947, intron 4 of 19) intron (NM_001302947, intron 4 of 19) 8657 NM_001302951 21888 Mm.103638 NM_011600 ENSMUSG00000024642 Tle4 5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4 transducin-like enhancer of split 4 protein-coding common_peak2_125_955_0.0473546631573907_9.92454413955944_0.422741120456507 chr6 47752014 47754516 + 0.422741120456507 NA promoter-TSS (NR_002841).10 promoter-TSS (NR_002841).10 -340 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_266_2535_-0.0311861452219357_11.2927459575284_0.422612205291273 chr12 4592052 4595735 + 0.422612205291273 NA intron (NM_011365, intron 1 of 38) intron (NM_011365, intron 1 of 38) 885 NM_001198968 20403 Mm.341204 NM_011365 ENSMUSG00000020640 Itsn2 AI327390|Ese2|Sh3d1B|Sh3p18|mKIAA1256 intersectin 2 protein-coding common_peak1_513_5621_-0.0206537780373104_12.4465408493617_0.422433493228227 chr12 102300940 102305096 + 0.422433493228227 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 19377 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_128_1051_-0.0490573028850694_10.0143903378498_0.422419512391459 chr4 155668616 155669789 + 0.422419512391459 NA promoter-TSS (NM_145124) promoter-TSS (NM_145124) 52 NM_001256108 76580 Mm.235738 NM_145124 ENSMUSG00000029060 Mib2 2210008I11Rik|Zzank1|skd mindbomb E3 ubiquitin protein ligase 2 protein-coding common_peak2_62_444_-0.0760523659019778_8.75963534290277_0.422404790367256 chr12 76837164 76838391 + 0.422404790367256 NA intron (NM_145927, intron 1 of 11) CpG 310 NM_145927 110606 Mm.151174 NM_145927 ENSMUSG00000033373 Fntb 2010013E13Rik|AA409500 farnesyltransferase, CAAX box, beta protein-coding common_peak2_82_618_-0.0642897300459158_9.24165073419131_0.422354651033249 chr3 129830216 129831929 + 0.422354651033249 NA intron (NM_026578, intron 1 of 6) CpG 324 NM_026578 68147 Mm.24873 NM_026578 ENSMUSG00000028010 Gar1 AA409823|AI326794|C430047J18Rik|Nola1 GAR1 ribonucleoprotein protein-coding common_peak1_22_135_-0.149002037156829_7.01296182267192_0.422272192329521 chr9 32617108 32617564 + 0.422272192329521 NA Intergenic Intergenic -75884 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_122_992_-0.0500721263096633_9.93061384437354_0.422242000998254 chr1 180725451 180726688 + 0.422242000998254 NA promoter-TSS (NM_133225) promoter-TSS (NM_133225) 26 NM_133225 170760 Mm.272981 NM_133225 ENSMUSG00000026499 Acbd3 60kDa|8430407O11Rik|D1Ertd10e|GCP60|GOLPH1|Gocap1|Pap7 acyl-Coenzyme A binding domain containing 3 protein-coding common_peak1_19_114_-0.154355823313598_6.76831213928758_0.422164006607571-2 chr3 144703712 144704172 + 0.422164006607571 NA intron (NM_001282037, intron 5 of 10) intron (NM_001282037, intron 5 of 10) 16393 NM_001282042 54673 Mm.271775 NM_019464 ENSMUSG00000037062 Sh3glb1 AA409932|AI314629|AU015566|Bif-1|mKIAA0491 SH3-domain GRB2-like B1 (endophilin) protein-coding common_peak1_19_114_-0.154355823313598_6.76831213928758_0.422164006607571-3 chr7 122101917 122102343 + 0.422164006607571 NA promoter-TSS (NM_028177) promoter-TSS (NM_028177) -282 NM_028177 70316 Mm.3014 NM_028177 ENSMUSG00000030869 Ndufab1 2210401F17Rik|2310039H15Rik|2610003B19Rik|8kDa|9130423F15Rik|ACP|CI-SDAP|SDAP NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 protein-coding common_peak1_19_114_-0.154355823313598_6.76831213928758_0.422164006607571 chr13 37559207 37559651 + 0.422164006607571 NA Intergenic Intergenic 214084 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding unique_peak2_19_114_-0.154355823313598_6.76831213928758_0.422164006607571 chr14 20772568 20773622 + 0.422164006607571 NA intron (NM_178597, intron 3 of 20) intron (NM_178597, intron 3 of 20) 20993 NM_001039138 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding unique_peak2_19_114_-0.154355823313598_6.76831213928758_0.422164006607571-2 chr16 52468239 52469148 + 0.422164006607571 NA Intergenic Intergenic -15696 NM_009655 11658 Mm.288282 NM_009655 ENSMUSG00000022636 Alcam AI853494|BEN|CD166|DM-GRASP|MuSC|SC1 activated leukocyte cell adhesion molecule protein-coding common_peak2_141_1180_-0.0460213923637838_10.1827825532153_0.422128997484715 chr2 180170793 180172849 + 0.422128997484715 NA intron (NM_019822, intron 1 of 9) CpG 233 NM_019822 56436 Mm.316654 NM_019822 ENSMUSG00000039041 Adrm1 1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110|Rpn13 adhesion regulating molecule 1 protein-coding common_peak1_141_1180_-0.0460213923637838_10.1827825532153_0.422128997484715 chr3 146520602 146521937 + 0.422128997484715 NA exon (NM_027371, exon 1 of 9) exon (NM_027371, exon 1 of 9) 154 NM_027332 70285 Mm.28128 NM_027332 ENSMUSG00000028187 Rpf1 2210420E24Rik|2310066N05Rik|Bxdc5 ribosome production factor 1 homolog protein-coding common_peak2_60_385_0.0720624137788928_8.62848824415753_0.422108612324408-2 chr5 65723949 65725530 + 0.422108612324408 NA Intergenic ERVL-B4-int|LTR|ERVL -26883 NM_001081321 71521 Mm.278974 NM_027818 ENSMUSG00000029202 Pds5a 9030416H16Rik|E230024D05Rik|mKIAA0648 PDS5 cohesin associated factor A protein-coding common_peak2_60_385_0.0720624137788928_8.62848824415753_0.422108612324408 chr13 37656961 37658338 + 0.422108612324408 NA Intergenic Intergenic -168389 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_53_369_-0.0825615824903618_8.49010066927113_0.422019037877879 chr15 74923565 74925477 + 0.422019037877879 NA Intergenic Intergenic -30530 NM_001164039 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding common_peak2_53_369_-0.0825615824903618_8.49010066927113_0.422019037877879-2 chr17 6815652 6817313 + 0.422019037877879 NA Intergenic Intergenic -33702 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_93_718_-0.0601045618269218_9.45979567952584_0.421949498247496 chr18 74267612 74269072 + 0.421949498247496 NA promoter-TSS (NM_013594) promoter-TSS (NM_013594) 54 NM_013594 17190 Mm.22522 NM_013594 ENSMUSG00000024561 Mbd1 Cxxc3|PCM1 methyl-CpG binding domain protein 1 protein-coding common_peak2_668_7565_0.0173033290583096_12.8939667255785_0.421772699452654 chr11 83653036 83666956 + 0.421772699452654 NA Intergenic Intergenic -2588 NM_013652 20303 Mm.244263 NM_013652 ENSMUSG00000018930 Ccl4 AT744.1|Act-2|MIP-1B|Mip1b|Scya4 chemokine (C-C motif) ligand 4 protein-coding common_peak1_16_95_-0.181426239746984_6.49424938084766_0.421729484740878-4 chr7 66130486 66130911 + 0.421729484740878 NA intron (NM_001081163, intron 2 of 2) RMER1B|Other|Other 21183 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding unique_peak2_16_95_-0.181426239746984_6.49424938084766_0.421729484740878-3 chr14 76579358 76580010 + 0.421729484740878 NA Intergenic Intergenic -22795 NR_027699 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding unique_peak2_16_95_-0.181426239746984_6.49424938084766_0.421729484740878-2 chr12 84242426 84243193 + 0.421729484740878 NA Intergenic URR1A|DNA|hAT-Charlie -23928 NM_001163501 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding unique_peak2_16_95_-0.181426239746984_6.49424938084766_0.421729484740878 chr10 40476632 40477524 + 0.421729484740878 NA intron (NM_001291816, intron 10 of 11) intron (NM_001291816, intron 10 of 11) -93284 NM_027572 70840 Mm.332570 NM_027572 ENSMUSG00000019834 Slc22a16 4921504E14Rik|CT2|FLIPT2|OCT6|OKB1 solute carrier family 22 (organic cation transporter), member 16 protein-coding common_peak1_16_95_-0.181426239746984_6.49424938084766_0.421729484740878 chr10 40371981 40372501 + 0.421729484740878 NA intron (NM_001291816, intron 1 of 11) RSINE1|SINE|B4 22933 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding common_peak1_16_95_-0.181426239746984_6.49424938084766_0.421729484740878-3 chr5 112219856 112220265 + 0.421729484740878 NA non-coding (NR_033657, exon 7 of 7) non-coding (NR_033657, exon 7 of 7) 8888 NR_033657 330166 Mm.44854 NR_003718 ENSMUSG00000097767 Miat 3632434I06|A230057G18Rik|Rncr2|gomafu myocardial infarction associated transcript (non-protein coding) ncRNA common_peak1_16_95_-0.181426239746984_6.49424938084766_0.421729484740878-2 chr2 38511699 38512103 + 0.421729484740878 NA promoter-TSS (NM_001159631) promoter-TSS (NM_001159631) 25 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak2_302_2955_-0.0284478443874097_11.5152066319524_0.421570323376533 chr4 102514716 102519713 + 0.421570323376533 NA intron (NM_019840, intron 5 of 14) intron (NM_019840, intron 5 of 14) -52846 NM_001177980 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak1_65_425_0.0692226386213992_8.76932093953654_0.421569464814849 chr5 45668976 45669877 + 0.421569464814849 NA promoter-TSS (NM_019438) promoter-TSS (NM_019438) 282 NR_073433 69788 Mm.381492 NR_073433 ENSMUSG00000104986 1600023N17Rik AV119442 RIKEN cDNA 1600023N17 gene ncRNA common_peak1_75_507_0.0649041389974379_9.02113675627088_0.421538625226048 chrX 169319755 169320594 + 0.421538625226048 NA 5' UTR (NM_008222, exon 1 of 7) 5' UTR (NM_008222, exon 1 of 7) 169 NM_008222 15159 Mm.284033 NM_008222 ENSMUSG00000031352 Hccs - holocytochrome c synthetase protein-coding common_peak2_108_797_0.0514972993072913_9.66599358587599_0.421377060653132 chr7 27355258 27357686 + 0.421377060653132 NA promoter-TSS (NM_138676) promoter-TSS (NM_138676) -464 NM_138676 192192 Mm.21297 NM_138676 ENSMUSG00000089832 Shkbp1 B930062H15Rik|Sb1 Sh3kbp1 binding protein 1 protein-coding unique_peak2_24_124_0.120230907474297_7.02589973839924_0.421338894353169 chr3 68676868 68677667 + 0.421338894353169 NA Intergenic Intergenic -13377 NM_001159424 16159 Mm.103783 NM_008351 ENSMUSG00000027776 Il12a IL-12p35|Il-12a|Ll12a|p35 interleukin 12a protein-coding common_peak1_24_124_0.120230907474297_7.02589973839924_0.421338894353169 chr13 108301445 108301955 + 0.421338894353169 NA Intergenic Intergenic -14637 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak1_24_124_0.120230907474297_7.02589973839924_0.421338894353169-2 chr6 130303941 130304451 + 0.421338894353169 NA intron (NM_010646, intron 2 of 6) intron (NM_010646, intron 2 of 6) 2236 NR_033451 16631 Mm.441781 NM_010647 ENSMUSG00000030178 Klra13-ps Klra13|Ly49M killer cell lectin-like receptor subfamily A, member 13, pseudogene pseudo common_peak2_24_124_0.120230907474297_7.02589973839924_0.421338894353169 chr1 38664322 38665228 + 0.421338894353169 NA Intergenic Intergenic -37531 NM_001290814 16764 Mm.336679 NM_010678 ENSMUSG00000037138 Aff3 3222402O04Rik|A730046J16|LAF-4|Laf4 AF4/FMR2 family, member 3 protein-coding common_peak2_29_184_-0.122725027918609_7.47001894655701_0.421289771645739 chr10 44537355 44538559 + 0.421289771645739 NA Intergenic Intergenic -79209 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding unique_peak2_29_184_-0.122725027918609_7.47001894655701_0.421289771645739 chr6 146724423 146725806 + 0.421289771645739 NA intron (NM_172734, intron 1 of 13) CpG 184 NM_172734 232533 Mm.322121 NM_172734 ENSMUSG00000001630 Stk38l 4930473A22Rik|Ndr2|Ndr54 serine/threonine kinase 38 like protein-coding common_peak2_29_184_-0.122725027918609_7.47001894655701_0.421289771645739-2 chr2 160943887 160945107 + 0.421289771645739 NA Intergenic Intergenic -32158 NM_182840 280635 Mm.330747 NM_182840 ENSMUSG00000050700 Emilin3 1110013O17Rik|EMILIN-3|EMILIN-5|EMILIN-T|Emilin5 elastin microfibril interfacer 3 protein-coding common_peak2_176_1540_-0.0399902253196771_10.5696560338549_0.421147003280948 chr3 54734156 54736435 + 0.421147003280948 NA promoter-TSS (NM_025442) promoter-TSS (NM_025442) 69 NM_027148 69639 Mm.29253 NM_027148 ENSMUSG00000027752 Exosc8 2310032N20Rik|CIP3|mKIAA4013 exosome component 8 protein-coding common_peak1_47_284_0.0855696702263469_8.19760294416528_0.42110981457413 chr2 166124451 166125324 + 0.42110981457413 NA intron (NM_001252579, intron 2 of 20) MTD|LTR|ERVL-MaLR 30398 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak2_105_829_-0.054613449604819_9.66966080143188_0.42108133410054 chr8 79710835 79712433 + 0.42108133410054 NA promoter-TSS (NM_026904) promoter-TSS (NM_026904) 106 NM_015751 24015 Mm.5831 NM_015751 ENSMUSG00000058355 Abce1 C79080|Oabp|RLI|RNS41|Rnaseli ATP-binding cassette, sub-family E (OABP), member 1 protein-coding common_peak2_769_8999_0.015730152733342_13.1435743624711_0.421014715479487 chr11 70785527 70794374 + 0.421014715479487 NA TTS (NM_001045526) TTS (NM_001045526) 22611 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak1_166_1357_0.039478841443227_10.4270071849663_0.421005295880704 chr14 25856520 25859219 + 0.421005295880704 NA intron (NM_013469, intron 1 of 14) L1MB4|LINE|L1 15714 NM_013469 11744 Mm.294083 NM_013469 ENSMUSG00000021866 Anxa11 A830099O17Rik|Anx11 annexin A11 protein-coding common_peak2_198_1775_-0.0374340725026876_10.7756988300988_0.420941032350027 chr5 24600532 24603713 + 0.420941032350027 NA promoter-TSS (NM_025891) promoter-TSS (NM_025891) -120 NM_025891 66993 Mm.436539 NM_025891 ENSMUSG00000028949 Smarcd3 1500001J14Rik|2210409C08Rik|BAF60C SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding common_peak1_56_353_0.0768931694671764_8.50605213481658_0.420685485988473 chr15 36716239 36716972 + 0.420685485988473 NA Intergenic Intergenic 74327 NM_001253807 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak2_58_411_-0.0809741221413933_8.64601346611252_0.420596670437555 chr7 90475283 90476838 + 0.420596670437555 NA promoter-TSS (NM_026734) promoter-TSS (NM_026734) -65 NM_026734 68472 Mm.289791 NM_026734 ENSMUSG00000030614 Tmem126b 1110001A23Rik transmembrane protein 126B protein-coding common_peak1_58_411_-0.0809741221413933_8.64601346611252_0.420596670437555 chr3 32529209 32530115 + 0.420596670437555 NA 5' UTR (NM_024200, exon 1 of 18) 5' UTR (NM_024200, exon 1 of 18) 180 NM_024200 67414 Mm.290414 NM_024200 ENSMUSG00000027668 Mfn1 2310002F04Rik|6330416C07Rik|D3Ertd265e|HR2|mKIAA4032 mitofusin 1 protein-coding common_peak2_97_698_0.0543399027216047_9.47631859673624_0.42059067601514 chr2 32362313 32364057 + 0.42059067601514 NA promoter-TSS (NM_028412) promoter-TSS (NM_028412) -13 NM_001252537 68379 Mm.170508 NM_028412 ENSMUSG00000039205 Ciz1 0610038H21Rik|2900056O04Rik|LSFR1|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding common_peak2_35_197_0.101941052979414_7.68032714656932_0.420514317958624 chr2 112379076 112379974 + 0.420514317958624 NA intron (NM_024254, intron 1 of 9) CpG 314 NM_024254 72425 Mm.425091 NM_024254 ENSMUSG00000027132 Katnbl1 2410042D21Rik|AA166487|AA473307|AI467442 katanin p80 subunit B like 1 protein-coding common_peak1_35_197_0.101941052979414_7.68032714656932_0.420514317958624 chr16 17131780 17132324 + 0.420514317958624 NA intron (NM_022324, intron 1 of 2) CpG-5545 331 NM_022324 64136 Mm.30222 NM_022324 ENSMUSG00000022769 Sdf2l1 - stromal cell-derived factor 2-like 1 protein-coding common_peak1_218_1900_0.0339107258903617_10.9094981795937_0.420503349165649 chr17 25187404 25189344 + 0.420503349165649 NA promoter-TSS (NM_001290736) promoter-TSS (NM_001290736) -26 NM_001197024 74154 Mm.267353 NM_028789 ENSMUSG00000015127 Unkl 1300004G08Rik unkempt family like zinc finger protein-coding common_peak1_156_1332_-0.0429854306833235_10.3589683497473_0.42044033844478 chr3 58576521 58577773 + 0.42044033844478 NA intron (NM_001040396, intron 1 of 5) CpG 489 NM_001040396 69227 Mm.270950 NM_001040396 ENSMUSG00000075700 Selenot 2810407C02Rik|5730408P04Rik|Selt selenoprotein T protein-coding common_peak1_94_727_-0.0593248499234846_9.47813221523695_0.420422967654797 chr1 75218326 75219858 + 0.420422967654797 NA intron (NM_001313724, intron 1 of 2) intron (NM_001313724, intron 1 of 2) 202 NM_001313723 22145 Mm.1155 NM_009447 ENSMUSG00000026202 Tuba4a M[a]4|Tuba4 tubulin, alpha 4A protein-coding common_peak1_127_974_0.046831788047264_9.9526743026606_0.420406211413742 chr7 25249096 25250924 + 0.420406211413742 NA intron (NM_010155, intron 1 of 3) CpG 748 NM_010155 13875 Mm.8068 NM_010155 ENSMUSG00000040857 Erf - Ets2 repressor factor protein-coding common_peak1_43_255_0.0864100538803072_8.04320502694015_0.420131401530466 chr1 164249045 164249578 + 0.420131401530466 NA exon (NM_001276455, exon 1 of 6) exon (NM_001276455, exon 1 of 6) 265 NM_001276455 116914 Mm.35444 NM_054087 ENSMUSG00000040918 Slc19a2 AV276020|AW322295|DDA1|THTR1|TRMA solute carrier family 19 (thiamine transporter), member 2 protein-coding common_peak2_267_2441_0.0299208375350322_11.2688079037549_0.420036280570394 chr10 82858418 82861987 + 0.420036280570394 NA promoter-TSS (NM_001042514) promoter-TSS (NM_001042514) -139 NM_001042514 50493 Mm.210155 NM_015762 ENSMUSG00000020250 Txnrd1 TR|TR1|TrxR1 thioredoxin reductase 1 protein-coding common_peak1_21_105_0.131877288130752_6.79385909862857_0.419969705660388-3 chr6 68251508 68252082 + 0.419969705660388 NA Intergenic RLTR3_Mm|LTR|ERVK -686096 NR_003100 75070 Mm.463364 NR_003100 4930515G16Rik - myc induced nuclear antigen pseudogene pseudo common_peak1_21_105_0.131877288130752_6.79385909862857_0.419969705660388-4 chr8 120527071 120527665 + 0.419969705660388 NA intron (NM_198671, intron 1 of 15) intron (NM_198671, intron 1 of 15) -8489 NM_001145897 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_21_105_0.131877288130752_6.79385909862857_0.419969705660388-2 chr17 88060018 88060592 + 0.419969705660388 NA intron (NM_001081034, intron 1 of 22) PB1D9|SINE|Alu 4980 NM_001081034 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding unique_peak2_21_105_0.131877288130752_6.79385909862857_0.419969705660388-2 chr2 167627422 167628225 + 0.419969705660388 NA intron (NM_001311146, intron 1 of 2) intron (NM_001311146, intron 1 of 2) 4182 NM_001311146 66589 Mm.278783 NM_023230 ENSMUSG00000078923 Ube2v1 0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1 ubiquitin-conjugating enzyme E2 variant 1 protein-coding common_peak1_21_105_0.131877288130752_6.79385909862857_0.419969705660388 chr11 106702386 106702795 + 0.419969705660388 NA intron (NM_001305158, intron 2 of 14) intron (NM_001305158, intron 2 of 14) 12691 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak2_21_105_0.131877288130752_6.79385909862857_0.419969705660388 chr1 156459664 156460344 + 0.419969705660388 NA intron (NM_009230, intron 2 of 15) intron (NM_009230, intron 2 of 15) 14324 NM_009230 20652 Mm.28099 NM_009230 ENSMUSG00000026600 Soat1 8430426K15Rik|ACAT-1|AW550831|Acact|ald|hid sterol O-acyltransferase 1 protein-coding unique_peak2_21_105_0.131877288130752_6.79385909862857_0.419969705660388 chr12 70139812 70140530 + 0.419969705660388 NA Intergenic Intergenic -14000 NM_001195033 100504285 Mm.291105 NM_001195033 ENSMUSG00000090121 Abhd12b Gm804 abhydrolase domain containing 12B protein-coding common_peak2_115_862_0.0486711877063257_9.77755234303212_0.419941307090892 chr19 42169959 42171521 + 0.419941307090892 NA 5' UTR (NM_177319, exon 1 of 13) 5' UTR (NM_177319, exon 1 of 13) 173 NM_001164531 319740 Mm.287359 NM_177319 ENSMUSG00000018820 Zfyve27 2210011N02Rik|9530077C24Rik|AI426636|AI593546|AI835681 zinc finger, FYVE domain containing 27 protein-coding common_peak2_115_862_0.0486711877063257_9.77755234303212_0.419941307090892-2 chr3 28804827 28806586 + 0.419941307090892 NA intron (NM_026517, intron 1 of 3) CpG 195 NM_026517 68028 Mm.371630 NM_026517 ENSMUSG00000039221 Rpl22l1 3110001N18Rik|AU041196 ribosomal protein L22 like 1 protein-coding common_peak1_33_213_-0.111318414240619_7.68580777928084_0.419932626730078 chr5 112253977 112254823 + 0.419932626730078 NA Intergenic Intergenic -1420 NM_001312895 12960 Mm.29488 NM_023695 ENSMUSG00000029343 Crybb1 3110006K12Rik|BB1CRY crystallin, beta B1 protein-coding common_peak1_271_2592_-0.0304209851336985_11.3251959982864_0.419910807807817 chr9 14499528 14501552 + 0.419910807807817 NA promoter-TSS (NM_173433) promoter-TSS (NM_173433) -58 NM_173433 244694 Mm.240457 NM_173433 ENSMUSG00000053914 Kdm4d 4932416A15|Jmjd2d lysine (K)-specific demethylase 4D protein-coding common_peak2_45_305_-0.092314727412786_8.21123047898626_0.419892412197997 chr10 61558699 61560607 + 0.419892412197997 NA intron (NM_153542, intron 4 of 4) intron (NM_153542, intron 4 of 4) -35831 NM_001177511 237362 Mm.131297 NM_001177511 ENSMUSG00000020090 Npffr1 Gm236|Gpr147|NPFF1|NPFF1R|OT7T022 neuropeptide FF receptor 1 protein-coding common_peak1_45_305_-0.092314727412786_8.21123047898626_0.419892412197997 chr7 141123131 141123786 + 0.419892412197997 NA Intergenic Intergenic -5652 NM_178381 71345 Mm.235813 NM_178381 ENSMUSG00000054662 Ano9 5430425C04Rik|Tmem16j|Tp53i5|Trp53i5 anoctamin 9 protein-coding common_peak1_39_226_0.0911980515262174_7.87214751305402_0.419834542294126 chr4 120668881 120669805 + 0.419834542294126 NA Intergenic Intergenic 2780 NM_019563 56222 Mm.272646 NM_019563 ENSMUSG00000070803 Cited4 MRG-2|Mrg2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 protein-coding common_peak2_39_226_0.0911980515262174_7.87214751305402_0.419834542294126-3 chr8 117512309 117513480 + 0.419834542294126 NA intron (NM_172285, intron 2 of 32) intron (NM_172285, intron 2 of 32) 14603 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak2_39_226_0.0911980515262174_7.87214751305402_0.419834542294126 chr16 36709104 36710444 + 0.419834542294126 NA intron (NM_134109, intron 3 of 7) intron (NM_134109, intron 3 of 7) 15796 NM_001285791 106347 Mm.17807 NM_134109 ENSMUSG00000022900 Ildr1 AU041483|AU044638 immunoglobulin-like domain containing receptor 1 protein-coding common_peak2_39_226_0.0911980515262174_7.87214751305402_0.419834542294126-2 chr5 139826161 139827321 + 0.419834542294126 NA 5' UTR (NM_025604, exon 1 of 3) 5' UTR (NM_025604, exon 1 of 3) 102 NM_025604 66506 Mm.29070 NM_025604 ENSMUSG00000029551 Psmg3 1810042K04Rik|4930403H09Rik|AI303239 proteasome (prosome, macropain) assembly chaperone 3 protein-coding common_peak1_39_226_0.0911980515262174_7.87214751305402_0.419834542294126-2 chr7 43431818 43432554 + 0.419834542294126 NA intron (NM_177693, intron 2 of 4) intron (NM_177693, intron 2 of 4) 2085 NM_177693 233187 Mm.267027 NM_177693 ENSMUSG00000004613 Lim2 19kDa|4833403J20|MP19|To3 lens intrinsic membrane protein 2 protein-coding common_peak2_147_1167_0.0431837147041065_10.2114164162321_0.419778370133092 chr15 76202810 76205875 + 0.419778370133092 NA intron (NM_011117, intron 1 of 31) intron (NM_011117, intron 1 of 31) 1979 NM_201389 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_134_1041_0.0451735914394078_10.0477263579982_0.41966563519003 chr9 22084857 22086203 + 0.41966563519003 NA promoter-TSS (NM_012029) promoter-TSS (NM_012029) -103 NM_012029 26940 Mm.425568 NM_012029 ENSMUSG00000066839 Ecsit Sitpec ECSIT signalling integrator protein-coding common_peak2_76_516_0.0627010704581323_9.045371005544_0.419484144002447 chr12 113145737 113147924 + 0.419484144002447 NA Intergenic Intergenic -5182 NM_007763 12925 Mm.272368 NM_007763 ENSMUSG00000006360 Crip1 CRHP|CRP1|Crip cysteine-rich protein 1 (intestinal) protein-coding common_peak2_171_1487_-0.0402070184813681_10.5190553018673_0.419450700865856 chr8 77421752 77424241 + 0.419450700865856 NA intron (NM_030113, intron 5 of 22) intron (NM_030113, intron 5 of 22) -94060 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak2_66_433_0.0689924677052449_8.7960474662971_0.419397133874805-4 chr3 9801141 9802897 + 0.419397133874805 NA intron (NM_001195031, intron 1 of 8) L1MDa|LINE|L1 31660 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding common_peak2_66_433_0.0689924677052449_8.7960474662971_0.419397133874805 chr14 78731707 78733658 + 0.419397133874805 NA Intergenic CpG -7593 NM_001081336 380921 Mm.89591 NM_001081336 ENSMUSG00000034731 Dgkh 5930402B05Rik|D130015C16|DGK diacylglycerol kinase, eta protein-coding common_peak2_66_433_0.0689924677052449_8.7960474662971_0.419397133874805-3 chr16 4938494 4939906 + 0.419397133874805 NA promoter-TSS (NM_001316715) promoter-TSS (NM_001316715) 89 NM_025839 66911 Mm.428698 NM_025839 ENSMUSG00000022516 Nudt16l1 1110001K21Rik|5330437I08Rik|Sdos nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 protein-coding common_peak2_66_433_0.0689924677052449_8.7960474662971_0.419397133874805-2 chr15 80598629 80600426 + 0.419397133874805 NA intron (NM_001289442, intron 1 of 7) intron (NM_001289442, intron 1 of 7) -23956 NM_010815 17444 Mm.12947 NM_010815 ENSMUSG00000042351 Grap2 GRAP-2|GRB2L|GRBLG|GRID|Gads|GrbX|Grf40|GrpL|Mona|P38 GRB2-related adaptor protein 2 protein-coding common_peak2_54_377_-0.0809514058351564_8.52176672130349_0.419381014267549 chr12 69241360 69242648 + 0.419381014267549 NA exon (NM_178253, exon 1 of 13) exon (NM_178253, exon 1 of 13) 172 NM_178253 271005 Mm.180969 NM_178253 ENSMUSG00000051890 Klhdc1 - kelch domain containing 1 protein-coding common_peak1_37_243_-0.10376082297964_7.87885692607307_0.419328795176733-2 chr9 107333062 107333855 + 0.419328795176733 NA intron (NM_133984, intron 4 of 10) intron (NM_133984, intron 4 of 10) 4892 NM_133984 69536 Mm.259467 NM_133984 ENSMUSG00000032579 Hemk1 2310008M14Rik|AW049265 HemK methyltransferase family member 1 protein-coding common_peak1_37_243_-0.10376082297964_7.87885692607307_0.419328795176733 chr5 130257036 130257575 + 0.419328795176733 NA intron (NM_001015876, intron 1 of 15) intron (NM_001015876, intron 1 of 15) 268 NM_001015876 100929 Mm.271296 NM_178897 ENSMUSG00000056310 Tyw1 AW125391|Rsafd1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) protein-coding common_peak2_52_322_0.0803514107491878_8.37556606006852_0.419281711018451 chr15 102224528 102226217 + 0.419281711018451 NA intron (NM_013566, intron 2 of 14) intron (NM_013566, intron 2 of 14) 6563 NM_013566 16421 Mm.58 NM_013566 ENSMUSG00000001281 Itgb7 Ly69 integrin beta 7 protein-coding common_peak2_41_274_-0.0992008534271669_8.05368738169844_0.419233907907008 chr1 176075550 176077658 + 0.419233907907008 NA intron (NM_001195816, intron 3 of 9) MTE2b|LTR|ERVL-MaLR 137338 NM_001195816 319455 Mm.338001 NM_176916 ENSMUSG00000055214 Pld5 B230365F16Rik phospholipase D family, member 5 protein-coding common_peak1_41_274_-0.0992008534271669_8.05368738169844_0.419233907907008 chr15 60824330 60824866 + 0.419233907907008 NA non-coding (NR_030696, exon 1 of 3) non-coding (NR_030696, exon 1 of 3) 482 NM_001162926 399603 Mm.411968 NM_207269 ENSMUSG00000072568 Fam84b BF642811|D330050I23Rik family with sequence similarity 84, member B protein-coding common_peak2_128_984_0.0458817720634936_9.96692080037549_0.419212937102934 chr16 33055933 33057690 + 0.419212937102934 NA promoter-TSS (NM_178378) promoter-TSS (NM_178378) 297 NM_021338 57808 Mm.19355 NM_021338 ENSMUSG00000060636 Rpl35a 2810431L15Rik|Rpl35 ribosomal protein L35A protein-coding common_peak1_15_70_0.146506143620486_6.22300019131493_0.419148369111222-3 chr9 41112167 41112507 + 0.419148369111222 NA intron (NM_176860, intron 1 of 13) B1F2|SINE|Alu 45157 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak1_15_70_0.146506143620486_6.22300019131493_0.419148369111222 chr16 49863498 49863889 + 0.419148369111222 NA intron (NM_010581, intron 1 of 9) intron (NM_010581, intron 1 of 9) 8039 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_15_70_0.146506143620486_6.22300019131493_0.419148369111222-2 chr6 8736106 8736549 + 0.419148369111222 NA intron (NM_001252266, intron 5 of 11) intron (NM_001252266, intron 5 of 11) 22131 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak1_18_87_0.140932584759593_6.52989791101709_0.41910296572734-2 chr15 62106721 62107191 + 0.41910296572734 NA intron (NR_132746, intron 1 of 6) intron (NR_132746, intron 1 of 6) 67699 NR_132746 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 plasmacytoma variant translocation 1 ncRNA common_peak2_18_87_0.140932584759593_6.52989791101709_0.41910296572734 chr16 11473880 11474491 + 0.41910296572734 NA intron (NM_001290148, intron 6 of 13) B4A|SINE|B4 68537 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak1_18_87_0.140932584759593_6.52989791101709_0.41910296572734 chr10 41385407 41385866 + 0.41910296572734 NA Intergenic Intergenic -64722 NM_001277229 268294 Mm.258475 NM_153398 ENSMUSG00000019826 Zbtb24 BC055367|Bif1|Bsg1|ZNF450 zinc finger and BTB domain containing 24 protein-coding common_peak2_141_1109_0.0434278957959044_10.1380579091354_0.419101931055083 chr1 97768666 97771128 + 0.419101931055083 NA promoter-TSS (NM_026250) promoter-TSS (NM_026250) 195 NM_173760 227399 Mm.220817 NM_173760 ENSMUSG00000040648 Ppip5k2 AW555814|Cfap160|D330021B20|Hisppd1|Vip2|mKIAA0433 diphosphoinositol pentakisphosphate kinase 2 protein-coding common_peak1_141_1109_0.0434278957959044_10.1380579091354_0.419101931055083 chr10 115361700 115363133 + 0.419101931055083 NA promoter-TSS (NM_133683) promoter-TSS (NM_133683) -154 NM_133683 67226 Mm.29647 NM_133683 ENSMUSG00000069520 Tmem19 2810428F02Rik|AW125171 transmembrane protein 19 protein-coding common_peak1_26_162_-0.126520587391482_7.28546786053534_0.419064009150694 chr10 99242287 99242799 + 0.419064009150694 NA Intergenic Intergenic -20688 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding unique_peak2_26_162_-0.126520587391482_7.28546786053534_0.419064009150694 chr11 51753266 51754338 + 0.419064009150694 NA intron (NM_001290785, intron 1 of 22) intron (NM_001290785, intron 1 of 22) 3032 NM_001290785 77371 Mm.33878 NM_175255 ENSMUSG00000036391 Sec24a - Sec24 related gene family, member A (S. cerevisiae) protein-coding common_peak1_26_162_-0.126520587391482_7.28546786053534_0.419064009150694-2 chr7 38106729 38107529 + 0.419064009150694 NA intron (NM_007633, intron 1 of 11) CpG 361 NM_007633 12447 Mm.16110 NM_007633 ENSMUSG00000002068 Ccne1 AW538188|CycE1 cyclin E1 protein-coding common_peak1_26_162_-0.126520587391482_7.28546786053534_0.419064009150694-3 chr8 111595368 111596034 + 0.419064009150694 NA intron (NM_001168623, intron 1 of 4) intron (NM_001168623, intron 1 of 4) 34621 NM_027570 52815 Mm.27589 NM_027570 ENSMUSG00000031958 Ldhd 4733401P21Rik|D8Bwg1320e lactate dehydrogenase D protein-coding common_peak1_205_1761_0.0351619860426826_10.8005792019418_0.418923356948397 chr15 78596388 78598179 + 0.418923356948397 NA intron (NM_028195, intron 1 of 12) intron (NM_028195, intron 1 of 12) 236 NM_028195 72318 Mm.32911 NM_028195 ENSMUSG00000018008 Cyth4 2510004M07Rik|5830469K17Rik|AI467541|Pscd4|mFLJ00017 cytohesin 4 protein-coding unique_peak2_11_63_-0.21283684309426_5.89358157845287_0.418895159650009 chr5 103961039 103961666 + 0.418895159650009 NA intron (NM_198030, intron 6 of 6) intron (NM_198030, intron 6 of 6) 16036 NM_198030 243168 Mm.284944 NM_198030 ENSMUSG00000034528 Hsd17b13 AI047820|PAN1B-like|Pan1b hydroxysteroid (17-beta) dehydrogenase 13 protein-coding common_peak1_87_610_0.057993795247933_9.2840254674427_0.418848767297795 chr3 138526386 138527165 + 0.418848767297795 NA promoter-TSS (NM_001313980) promoter-TSS (NM_001313980) 354 NR_035481 100316706 NR_035481 ENSMUSG00000088373 Mir1956 mir-1956|mmu-mir-1956 microRNA 1956 ncRNA common_peak2_278_2566_0.0290836564654562_11.3404094088081_0.418672661500751 chr4 106908269 106912828 + 0.418672661500751 NA promoter-TSS (NM_023672) promoter-TSS (NM_023672) -922 NM_198438 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak2_101_791_-0.0550735317657978_9.60181985419671_0.418629122813457 chr13 74349507 74350951 + 0.418629122813457 NA promoter-TSS (NM_001168658) promoter-TSS (NM_001168658) 11 NM_023281 66945 Mm.158231 NM_023281 ENSMUSG00000021577 Sdha 1500032O14Rik|2310034D06Rik|4921513A11|C81073|FP|SDH2|SDHF succinate dehydrogenase complex, subunit A, flavoprotein (Fp) protein-coding common_peak2_107_848_-0.0541885543407314_9.70252646638267_0.418342768791729 chr13 37852817 37855265 + 0.418342768791729 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) 26648 NM_001039188 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_79_591_-0.0650945156254608_9.17690610781622_0.418339925099652 chr13 67060307 67061687 + 0.418339925099652 NA intron (NM_001166218, intron 1 of 3) CpG 173 NM_001166218 78251 Mm.297247 NM_001166218 ENSMUSG00000090641 Zfp712 4921504N20Rik|mszf31|mszf89 zinc finger protein 712 protein-coding common_peak1_28_150_0.11025857518749_7.29353402691882_0.418309362649061-4 chr8 54466186 54466738 + 0.418309362649061 NA Intergenic Intergenic 63536 NM_029701 76687 Mm.86437 NM_029701 ENSMUSG00000054408 Spcs3 1810011E08Rik|SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) protein-coding common_peak1_28_150_0.11025857518749_7.29353402691882_0.418309362649061-3 chr14 70794909 70795620 + 0.418309362649061 NA Intergenic Intergenic 20883 NM_010071 13449 Mm.243323 NM_010071 ENSMUSG00000022102 Dok2 DokR|Frip docking protein 2 protein-coding common_peak1_28_150_0.11025857518749_7.29353402691882_0.418309362649061 chr10 118458950 118459523 + 0.418309362649061 NA Intergenic Lx8|LINE|L1 18190 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak1_28_150_0.11025857518749_7.29353402691882_0.418309362649061-2 chr11 98963435 98963973 + 0.418309362649061 NA intron (NM_001176528, intron 1 of 7) intron (NM_001176528, intron 1 of 7) 3233 NM_001176528 19401 Mm.439744 NM_009024 ENSMUSG00000037992 Rara Nr1b1|RAR|RARalpha1 retinoic acid receptor, alpha protein-coding common_peak2_129_994_0.0449741160882411_9.98103977347513_0.418043283475157 chr7 100371119 100373053 + 0.418043283475157 NA promoter-TSS (NM_001017985) promoter-TSS (NM_001017985) -147 NM_001017985 277939 Mm.276374 NM_001017985 ENSMUSG00000047248 C2cd3 AU020772 C2 calcium-dependent domain containing 3 protein-coding common_peak2_48_292_0.0821193824884361_8.23581654566647_0.417917359733019 chr11 79305187 79307286 + 0.417917359733019 NA Intergenic Intergenic -33656 NM_010897 18015 Mm.255596 NM_010897 ENSMUSG00000020716 Nf1 AW494271|Dsk9|E030030H24Rik|Mhdadsk9|Nf-1 neurofibromin 1 protein-coding common_peak2_48_292_0.0821193824884361_8.23581654566647_0.417917359733019-2 chr5 99906132 99907056 + 0.417917359733019 NA Intergenic CpG 72344 NM_001077266 11991 Mm.150231 NM_007516 ENSMUSG00000000568 Hnrnpd Auf1|Hnrpd heterogeneous nuclear ribonucleoprotein D protein-coding common_peak2_69_503_-0.0692218977900261_8.9426689746049_0.417898127781891 chr9 109073401 109074725 + 0.417898127781891 NA promoter-TSS (NM_172774) promoter-TSS (NM_172774) 61 NM_172774 235610 Mm.100622 NM_172774 ENSMUSG00000025646 Atrip 6620401K05Rik ATR interacting protein protein-coding common_peak2_50_345_-0.086957450509269_8.39114950238209_0.417871475229259 chr11 70533415 70535213 + 0.417871475229259 NA Intergenic ORR1A4|LTR|ERVL-MaLR -5958 NM_008876 18806 Mm.260177 NM_008876 ENSMUSG00000020828 Pld2 PLD1C phospholipase D2 protein-coding common_peak2_152_1291_-0.0435850614131841_10.3135978239873_0.41784140857648 chr8 70526999 70528633 + 0.41784140857648 NA promoter-TSS (NM_010223) promoter-TSS (NM_010223) -30 NM_001199631 14232 Mm.141864 NM_010223 ENSMUSG00000019428 Fkbp8 38kDa|FKBP-38|FKBP-8|Fkbp38 FK506 binding protein 8 protein-coding unique_peak2_64_461_-0.0748345210831616_8.81433178087448_0.417818588773773 chr13 59671456 59673672 + 0.417818588773773 NA intron (NM_001035122, intron 1 of 9) intron (NM_001035122, intron 1 of 9) 3220 NM_001035122 105348 Mm.171335 NM_027307 ENSMUSG00000021556 Golm1 2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257 golgi membrane protein 1 protein-coding common_peak1_64_461_-0.0748345210831616_8.81433178087448_0.417818588773773 chr7 45015506 45016230 + 0.417818588773773 NA intron (NM_001008422, intron 1 of 10) CpG 381 NM_001008422 233208 Mm.28298 NM_001008422 ENSMUSG00000038406 Scaf1 AI480556|SR-A1 SR-related CTD-associated factor 1 protein-coding common_peak1_170_1398_0.0384529885387046_10.4694067414341_0.417534888638309 chr1 153486148 153488058 + 0.417534888638309 NA intron (NM_007842, intron 1 of 27) CpG 557 NM_007842 13211 Mm.20000 NM_007842 ENSMUSG00000042699 Dhx9 AI326842|Ddx9|HEL-5|NDHII|RHA|mHEL-5 DEAH (Asp-Glu-Ala-His) box polypeptide 9 protein-coding common_peak2_77_525_0.0606367715019154_9.06923737504326_0.417498545569051 chr13 100491602 100492856 + 0.417498545569051 NA intron (NM_022011, intron 1 of 15) CpG 380 NM_022011 23894 Mm.272533 NM_022011 ENSMUSG00000021639 Gtf2h2 44kDa|BTF2 p44|BTF2-p44|Btf2p44|p44 general transcription factor II H, polypeptide 2 protein-coding common_peak1_117_881_0.0475038706706599_9.80838678089285_0.417420902718184 chr4 141147295 141148589 + 0.417420902718184 NA promoter-TSS (NM_172518) promoter-TSS (NM_172518) 20 NM_172518 213499 Mm.28865 NM_172518 ENSMUSG00000028920 Fbxo42 6720460I06Rik|mKIAA1332 F-box protein 42 protein-coding common_peak1_44_262_0.0872596482723296_8.08254881342847_0.417048266330689 chr10 80683291 80684172 + 0.417048266330689 NA Intergenic Intergenic -7438 NM_021462 17347 Mm.42126 NM_021462 ENSMUSG00000020190 Mknk2 2010016G11Rik|Gprk7|Mnk2 MAP kinase-interacting serine/threonine kinase 2 protein-coding common_peak2_67_442_0.0655979947918652_8.82396188595095_0.41704500180144 chr14 73122727 73124961 + 0.41704500180144 NA Intergenic Intergenic -18666 NM_001170694 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak2_235_2181_-0.0326843589090675_11.0750932068691_0.417005324060277 chr3 88684610 88687211 + 0.417005324060277 NA intron (NM_028814, intron 1 of 13) CpG 116 NM_028814 74200 Mm.251800 NM_028814 ENSMUSG00000028060 2810403A07Rik A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907 RIKEN cDNA 2810403A07 gene protein-coding common_peak1_23_141_-0.135971651412587_7.08176129379839_0.416880015023951-2 chr4 45452771 45453248 + 0.416880015023951 NA intron (NM_001033306, intron 3 of 5) L2b|LINE|L2 -44243 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding common_peak1_23_141_-0.135971651412587_7.08176129379839_0.416880015023951 chr15 38601969 38602540 + 0.416880015023951 NA Intergenic Intergenic -7320 NR_045757 69679 Mm.416890 NR_045757 ENSMUSG00000102106 2310043O21Rik - RIKEN cDNA 2310043O21 gene ncRNA common_peak1_55_385_-0.0792799760637983_8.55281704923618_0.416855587260954 chr6 124755832 124756682 + 0.416855587260954 NA intron (NM_007881, intron 1 of 9) G-rich|Low_complexity|Low_complexity 230 NM_007881 13498 Mm.333380 NM_007881 ENSMUSG00000004263 Atn1 Atr1|Drpla|atrophin-1 atrophin 1 protein-coding common_peak1_46_313_-0.0914896614656104_8.24887591815882_0.416763527138126 chr1 13267138 13267974 + 0.416763527138126 NA intron (NM_001302702, intron 2 of 21) intron (NM_001302702, intron 2 of 21) 104873 NM_001302702 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding common_peak1_30_191_-0.11828029598685_7.52582235272773_0.41671241851035 chr1 165815990 165816555 + 0.41671241851035 NA intron (NR_103716, intron 1 of 8) (TAAA)n|Simple_repeat|Simple_repeat 27591 NM_001113392 12503 Mm.217308 NM_031162 ENSMUSG00000005763 Cd247 4930549J05Rik|A430104F18Rik|AW552088|Cd3|Cd3-eta|Cd3-zeta|Cd3h|Cd3z|Cd3zeta|T3z|Tcrk|Tcrz CD247 antigen protein-coding unique_peak2_30_191_-0.11828029598685_7.52582235272773_0.41671241851035 chr1 94034443 94035624 + 0.41671241851035 NA Intergenic Intergenic 14540 NM_001310769 241159 Mm.214565 NM_173772 ENSMUSG00000034000 Neu4 9330166I04 sialidase 4 protein-coding unique_peak2_30_191_-0.11828029598685_7.52582235272773_0.41671241851035-2 chr7 128169751 128171139 + 0.41671241851035 NA Intergenic (GAGAA)n|Simple_repeat|Simple_repeat -3501 NM_001029872 381924 Mm.334257 NM_001029872 ENSMUSG00000070369 Itgad Cd11d integrin, alpha D protein-coding common_peak1_30_191_-0.11828029598685_7.52582235272773_0.41671241851035-2 chr2 120025764 120026427 + 0.41671241851035 NA 3' UTR (NM_011941, exon 30 of 30) 3' UTR (NM_011941, exon 30 of 30) -1388 NR_104353 102238433 Mm.41467 NR_104353 ENSMUSG00000033852 Gm28042 Jmjd7-pla2g4b predicted gene, 28042 ncRNA unique_peak2_32_177_0.101586516694482_7.52652668931364_0.41671241851035 chr11 98917796 98919034 + 0.41671241851035 NA intron (NM_001025779, intron 9 of 11) intron (NM_001025779, intron 9 of 11) 10264 NM_011799 23834 Mm.20912 NM_011799 ENSMUSG00000017499 Cdc6 CDC18L cell division cycle 6 protein-coding common_peak1_216_1879_0.0337013674347766_10.8933676302824_0.416658032676069 chr10 61679696 61681185 + 0.416658032676069 NA promoter-TSS (NR_126477) promoter-TSS (NR_126477) 119 NM_009120 20224 Mm.391794 NM_009120 ENSMUSG00000020088 Sar1a 1600019H17Rik|Sara|Sara1 secretion associated Ras related GTPase 1A protein-coding common_peak1_53_330_0.0781324712187335_8.40975364241658_0.416494483502958 chr4 45107449 45108233 + 0.416494483502958 NA intron (NM_001134646, intron 1 of 2) CpG 272 NM_001134646 68512 Mm.282081 NM_001099675 ENSMUSG00000078713 Tomm5 1110019J04Rik|Tom5 translocase of outer mitochondrial membrane 5 homolog (yeast) protein-coding common_peak1_182_1602_-0.0379047429542911_10.6276063386774_0.416437752485193 chr6 113695050 113696749 + 0.416437752485193 NA TTS (NM_172161) TTS (NM_172161) -1600 NM_001033463 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak2_118_890_0.0477907487177216_9.82317699588078_0.416263949644927 chr14 20347158 20349162 + 0.416263949644927 NA promoter-TSS (NM_001024512) promoter-TSS (NM_001024512) -2 NM_001024512 105428 Mm.206990 NM_172379 ENSMUSG00000039599 Fam149b AA536717|AI428773|Fam149b1|mKIAA0974 family with sequence similarity 149, member B protein-coding common_peak1_75_555_-0.0653522469539034_9.08626494924656_0.416211389521459 chr6 67036524 67037449 + 0.416211389521459 NA intron (NR_040278, intron 1 of 6) CpG 387 NR_040278 320172 Mm.449039 NR_040278 ENSMUSG00000087231 E230016M11Rik - RIKEN cDNA E230016M11 gene ncRNA common_peak2_106_779_0.0516401056061628_9.63315036655269_0.416109387251326 chr11 86200603 86202321 + 0.416109387251326 NA promoter-TSS (NM_178309) promoter-TSS (NM_178309) 102 NR_130958 74038 Mm.171304 NR_130958 ENSMUSG00000085208 Brip1os 4632419I22Rik BRCA1 interacting protein C-terminal helicase 1, opposite strand ncRNA common_peak1_106_779_0.0516401056061628_9.63315036655269_0.416109387251326 chr2 3739274 3741107 + 0.416109387251326 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 26732 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak2_168_1455_-0.0399807916692865_10.4878042443641_0.416073921797012 chr7 80024181 80028289 + 0.416073921797012 NA promoter-TSS (NM_175433) promoter-TSS (NM_175433) 7 NM_175433 209225 Mm.290925 NM_175433 ENSMUSG00000048897 Zfp710 5430400N05Rik|9830165K13|AI324798|Znf710 zinc finger protein 710 protein-coding common_peak1_34_220_-0.106456844867898_7.73467413695748_0.416014178788605 chr12 73657161 73657732 + 0.416014178788605 NA intron (NM_001313977, intron 3 of 14) intron (NM_001313977, intron 3 of 14) 72650 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_34_220_-0.106456844867898_7.73467413695748_0.416014178788605-3 chr6 108064921 108065354 + 0.416014178788605 NA promoter-TSS (NM_001276356) promoter-TSS (NM_001276356) 92 NM_178391 74729 Mm.56539 NM_178391 ENSMUSG00000034639 Setmar 5830404F24Rik|Etet2 SET domain without mariner transposase fusion protein-coding common_peak1_36_205_0.0932831240281917_7.73314208919731_0.416014178788605 chr19 16132031 16132564 + 0.416014178788605 NA promoter-TSS (NM_008139) promoter-TSS (NM_008139) -534 NM_008139 14682 Mm.439701 NM_008139 ENSMUSG00000024639 Gnaq 1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI guanine nucleotide binding protein, alpha q polypeptide protein-coding common_peak2_34_220_-0.106456844867898_7.73467413695748_0.416014178788605 chr7 97399989 97400778 + 0.416014178788605 NA intron (NM_024220, intron 1 of 2) CpG 380 NM_024220 68197 Mm.334031 NM_024220 ENSMUSG00000030647 Ndufc2 1810004I06Rik|2010300P09Rik|G1|R75094 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2 protein-coding common_peak1_36_205_0.0932831240281917_7.73314208919731_0.416014178788605-2 chr3 93558794 93559809 + 0.416014178788605 NA intron (NM_009112, intron 1 of 2) intron (NM_009112, intron 1 of 2) 4184 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak1_34_220_-0.106456844867898_7.73467413695748_0.416014178788605-2 chr14 20180607 20181195 + 0.416014178788605 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 881 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak2_109_866_-0.0519848536495626_9.73389575639705_0.415861157734948 chr2 173021603 173023490 + 0.415861157734948 NA intron (NM_019547, intron 1 of 3) intron (NM_019547, intron 1 of 3) 644 NM_019547 56190 Mm.485782 NM_019547 ENSMUSG00000027510 Rbm38 Rnpc1|Seb4|Seb4l RNA binding motif protein 38 protein-coding common_peak2_198_1774_-0.0366215154319889_10.7752925515634_0.415585008726848 chr4 8535300 8536925 + 0.415585008726848 NA intron (NM_021518, intron 1 of 7) CpG 468 NM_021518 59021 Mm.397471 NM_021518 ENSMUSG00000047187 Rab2a 9330148M11Rik|C80220|Rab2 RAB2A, member RAS oncogene family protein-coding common_peak2_89_628_0.0558747418716994_9.32485357781514_0.415539823569858 chr15 60822816 60825066 + 0.415539823569858 NA non-coding (NR_030696, exon 1 of 3) non-coding (NR_030696, exon 1 of 3) 976 NR_030696 320469 Mm.230853 NM_177166 9930014A18Rik - RIKEN cDNA 9930014A18 gene ncRNA common_peak1_73_491_0.0638814570585264_8.9744552338685_0.415339368624138 chr3 122923889 122925018 + 0.415339368624138 NA promoter-TSS (NM_024461) promoter-TSS (NM_024461) 56 NM_024461 67704 Mm.24219 NM_024461 ENSMUSG00000054091 1810037I17Rik 5730414I01Rik RIKEN cDNA 1810037I17 gene protein-coding common_peak1_58_370_0.0702510284210227_8.57040089083131_0.415331212010858 chr9 99242921 99244030 + 0.415331212010858 NA promoter-TSS (NM_023873) promoter-TSS (NM_023873) 7 NM_023873 68121 Mm.288739 NM_023873 ENSMUSG00000056267 Cep70 6720484E09Rik|Bite|C030018L16Rik centrosomal protein 70 protein-coding common_peak1_25_131_0.111027125282479_7.09990768199969_0.415187683217432 chr4 141872754 141873300 + 0.415187683217432 NA intron (NM_025994, intron 1 of 3) intron (NM_025994, intron 1 of 3) 1893 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding common_peak1_63_409_0.0699977859924346_8.71447899250166_0.415180096689666 chr19 53037939 53038603 + 0.415180096689666 NA intron (NM_133216, intron 1 of 20) CpG 383 NM_133216 170750 Mm.99776 NM_133216 ENSMUSG00000025027 Xpnpep1 D230045I08Rik|sAMP X-prolyl aminopeptidase (aminopeptidase P) 1, soluble protein-coding common_peak1_51_353_-0.0855719942557087_8.42481955295514_0.415149573871915-3 chr4 102607412 102608269 + 0.415149573871915 NA TTS (NM_001177981) TTS (NM_001177981) 17997 NM_001177981 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak1_51_353_-0.0855719942557087_8.42481955295514_0.415149573871915-2 chr2 58138228 58139275 + 0.415149573871915 NA intron (NM_139200, intron 6 of 7) intron (NM_139200, intron 6 of 7) 21371 NM_139200 227929 Mm.273905 NM_139200 ENSMUSG00000026832 Cytip A130053M09Rik|AI462064|C80816|Cbp|Cybr|Pscdbp cytohesin 1 interacting protein protein-coding common_peak1_51_353_-0.0855719942557087_8.42481955295514_0.415149573871915 chr13 51202636 51203061 + 0.415149573871915 NA non-coding (NR_132443, exon 1 of 1) non-coding (NR_132443, exon 1 of 1) 218 NR_132443 667728 NR_132443 Hist1h2al EG667728 histone cluster 1, H2al pseudo common_peak2_68_450_0.0656116969914144_8.84978947175109_0.41503134060228 chr12 73645375 73648599 + 0.41503134060228 NA intron (NM_001313977, intron 2 of 14) intron (NM_001313977, intron 2 of 14) 62191 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak1_49_300_0.0790078265630392_8.27312359004122_0.414890282064654 chr4 103313725 103314536 + 0.414890282064654 NA intron (NM_025909, intron 1 of 8) CpG 284 NM_025909 67013 Mm.30021 NM_025909 ENSMUSG00000035069 Oma1 2010001O09Rik|MPRP-1|ZMPOMA1 OMA1 zinc metallopeptidase protein-coding common_peak2_101_734_0.0526826485900855_9.54794176401877_0.41483572960166 chr2 26496311 26499748 + 0.41483572960166 NA intron (NM_008714, intron 2 of 33) intron (NM_008714, intron 2 of 33) 5793 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak1_20_121_-0.153262693764389_6.85410599068069_0.4148168146536-2 chr15 5694014 5694546 + 0.4148168146536 NA Intergenic Intergenic 197962 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA unique_peak2_20_121_-0.153262693764389_6.85410599068069_0.4148168146536 chr3 106995319 106996440 + 0.4148168146536 NA Intergenic Intergenic -40283 NM_008418 16491 Mm.30640 NM_008418 ENSMUSG00000047959 Kcna3 Kca1-3|Kv1.3|Mk-3 potassium voltage-gated channel, shaker-related subfamily, member 3 protein-coding common_peak1_20_121_-0.153262693764389_6.85410599068069_0.4148168146536 chr14 54140773 54141268 + 0.4148168146536 NA Intergenic MusHAL1|LINE|L1 112909 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_20_121_-0.153262693764389_6.85410599068069_0.4148168146536-3 chr19 60183331 60183907 + 0.4148168146536 NA Intergenic B4|SINE|B4 38944 NR_026942 107376 Mm.245813 NR_026942 ENSMUSG00000053117 E330013P04Rik 9930018I18Rik|AW492152 RIKEN cDNA E330013P04 gene ncRNA common_peak2_20_121_-0.153262693764389_6.85410599068069_0.4148168146536 chr5 133842141 133842663 + 0.4148168146536 NA Intergenic Intergenic -257346 NM_030719 80909 Mm.45218 NM_030719 ENSMUSG00000015944 Gatsl2 7530428J21Rik|AW742413|Gats|Gatsl1 GATS protein-like 2 protein-coding unique_peak2_20_121_-0.153262693764389_6.85410599068069_0.4148168146536-2 chr7 16097367 16098145 + 0.4148168146536 NA promoter-TSS (NM_025898) promoter-TSS (NM_025898) -887 NM_025898 108124 Mm.104540 NM_025898 ENSMUSG00000006024 Napa 1500039N14Rik|AW209189|RA81|SNAPA|SNARE|a-SNAP|hyh N-ethylmaleimide sensitive fusion protein attachment protein alpha protein-coding common_peak2_113_844_0.048303499566984_9.74695928095304_0.414791608110863 chr4 137373041 137374698 + 0.414791608110863 NA Intergenic Intergenic -16110 NM_001243769 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak2_84_585_0.0568849934302431_9.22319935113737_0.414609014198795 chrX 167132488 167135138 + 0.414609014198795 NA Intergenic G-rich|Low_complexity|Low_complexity -63443 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak2_419_4259_0.0221671379363304_12.0677212840814_0.414574999743635 chr3 90264269 90267861 + 0.414574999743635 NA promoter-TSS (NM_201407) promoter-TSS (NM_201407) -449 NM_201407 229541 Mm.30571 NM_201407 ENSMUSG00000042404 Dennd4b - DENN/MADD domain containing 4B protein-coding unique_peak2_14_82_-0.192995309935577_6.27854177637914_0.414570791443893-2 chr9 110460660 110461486 + 0.414570791443893 NA intron (NM_177771, intron 1 of 9) L2c|LINE|L2 15621 NM_177771 270201 Mm.41744 NM_177771 ENSMUSG00000054792 Klhl18 A930041K15|AW545966 kelch-like 18 protein-coding unique_peak2_14_82_-0.192995309935577_6.27854177637914_0.414570791443893 chr10 14017991 14018696 + 0.414570791443893 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 51964 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_14_82_-0.192995309935577_6.27854177637914_0.414570791443893 chr1 136683518 136683914 + 0.414570791443893 NA promoter-TSS (NR_045325) promoter-TSS (NR_045325) 87 NR_045325 100503460 Mm.30630 NR_045324 ENSMUSG00000097113 Gm19705 - predicted gene, 19705 ncRNA common_peak1_181_1511_0.0367149296853313_10.5805998890637_0.41450010275853 chr12 80643230 80644970 + 0.41450010275853 NA promoter-TSS (NM_026244) promoter-TSS (NM_026244) -115 NM_026244 328133 Mm.238279 NM_026244 ENSMUSG00000048833 Slc39a9 2010002A02Rik|2610511I23Rik|4833420E20Rik|AW209151 solute carrier family 39 (zinc transporter), member 9 protein-coding common_peak1_181_1511_0.0367149296853313_10.5805998890637_0.41450010275853-2 chr16 70313482 70314993 + 0.41450010275853 NA exon (NM_028803, exon 1 of 16) exon (NM_028803, exon 1 of 16) 288 NM_028803 74185 Mm.396102 NM_028803 ENSMUSG00000022707 Gbe1 2310045H19Rik|2810426P10Rik|D16Ertd536e glucan (1,4-alpha-), branching enzyme 1 protein-coding common_peak2_181_1511_0.0367149296853313_10.5805998890637_0.41450010275853 chr5 65862697 65865460 + 0.41450010275853 NA intron (NM_001081105, intron 1 of 2) ID_B1|SINE|B4 509 NM_001081105 74734 Mm.20323 NM_001081105 ENSMUSG00000029204 Rhoh 5830400A04Rik|AU019774|Arhh ras homolog family member H protein-coding common_peak2_56_393_-0.0775530999062024_8.58327526950328_0.414435697882442 chr8 121577659 121579593 + 0.414435697882442 NA exon (NM_133765, exon 1 of 9) exon (NM_133765, exon 1 of 9) 180 NM_133765 76454 Mm.24829 NM_133765 ENSMUSG00000052934 Fbxo31 1110003O08Rik|2310046N15Rik|Fbx14|Fbxo14 F-box protein 31 protein-coding unique_peak2_56_393_-0.0775530999062024_8.58327526950328_0.414435697882442 chr2 52314307 52316548 + 0.414435697882442 NA TTS (NR_040620) TTS (NR_040620) 23371 NM_010889 17996 Mm.389247 NM_010889 ENSMUSG00000026950 Neb AI595938 nebulin protein-coding common_peak1_17_101_-0.167739980098828_6.58855535192208_0.41417870533325-3 chr2 154731938 154732386 + 0.41417870533325 NA Intergenic Intergenic -58948 NM_001139512 19383 Mm.221440 NM_023130 ENSMUSG00000027593 Raly AI663842|Merc hnRNP-associated with lethal yellow protein-coding common_peak1_17_101_-0.167739980098828_6.58855535192208_0.41417870533325-4 chr2 164868035 164868499 + 0.41417870533325 NA Intergenic B1F2|SINE|Alu -10559 NM_011125 18830 Mm.6105 NM_011125 ENSMUSG00000017754 Pltp Bpife|OD107 phospholipid transfer protein protein-coding unique_peak2_17_101_-0.167739980098828_6.58855535192208_0.41417870533325-2 chr14 121263486 121264482 + 0.41417870533325 NA intron (NM_134082, intron 16 of 26) intron (NM_134082, intron 16 of 26) 115246 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_17_101_-0.167739980098828_6.58855535192208_0.41417870533325-5 chr5 121385997 121386480 + 0.41417870533325 NA promoter-TSS (NM_001163470) promoter-TSS (NM_001163470) -623 NM_172275 231712 Mm.20488 NM_172275 ENSMUSG00000042726 Trafd1 1110008K06Rik|Fln29 TRAF type zinc finger domain containing 1 protein-coding unique_peak2_17_101_-0.167739980098828_6.58855535192208_0.41417870533325-3 chr17 31833737 31834546 + 0.41417870533325 NA Intergenic Intergenic 21651 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak1_17_101_-0.167739980098828_6.58855535192208_0.41417870533325-6 chr9 69458881 69459350 + 0.41417870533325 NA intron (NM_007585, intron 1 of 12) intron (NM_007585, intron 1 of 12) 2171 NR_037296 100526560 NR_037296 ENSMUSG00000093042 Mir3109 mir-3109|mmu-mir-3109 microRNA 3109 ncRNA unique_peak2_17_101_-0.167739980098828_6.58855535192208_0.41417870533325 chr1 60989887 60990749 + 0.41417870533325 NA intron (NM_017480, intron 1 of 4) intron (NM_017480, intron 1 of 4) 12404 NM_017480 54167 Mm.42044 NM_017480 ENSMUSG00000026009 Icos AILIM|CCLP|CRP-1|H4|Ly115 inducible T cell co-stimulator protein-coding common_peak1_17_101_-0.167739980098828_6.58855535192208_0.41417870533325-2 chr16 78536540 78536922 + 0.41417870533325 NA Intergenic MTC|LTR|ERVL-MaLR -23585 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA unique_peak2_17_101_-0.167739980098828_6.58855535192208_0.41417870533325-4 chr18 46311392 46312023 + 0.41417870533325 NA exon (NM_001160399, exon 1 of 10) exon (NM_001160399, exon 1 of 10) 221 NM_001160399 240261 Mm.329416 NM_001160399 ENSMUSG00000071855 Ccdc112 8430438M01Rik|AW108467 coiled-coil domain containing 112 protein-coding common_peak1_17_101_-0.167739980098828_6.58855535192208_0.41417870533325 chr14 121899469 121899795 + 0.41417870533325 NA intron (NM_026861, intron 1 of 8) intron (NM_026861, intron 1 of 8) 16142 NM_182806 110168 Mm.37405 NM_182806 ENSMUSG00000050350 Gpr18 - G protein-coupled receptor 18 protein-coding common_peak1_240_2237_-0.0321428257217438_11.1119229081155_0.414070449986425 chr9 96392761 96396247 + 0.414070449986425 NA Intergenic B3|SINE|B2 -30205 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding common_peak1_232_2147_-0.0326667171115638_11.0524449194296_0.413977499033842 chr4 101184419 101187379 + 0.413977499033842 NA intron (NM_146145, intron 4 of 24) intron (NM_146145, intron 4 of 24) 79383 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding unique_peak2_27_169_-0.122826186119776_7.34797784307781_0.41397669133061 chr11 83564877 83566141 + 0.41397669133061 NA Intergenic B1F1|SINE|Alu 13127 NM_011338 20308 Mm.416125 NM_011338 ENSMUSG00000019122 Ccl9 CCF18|MRP-2|Scya10|Scya9 chemokine (C-C motif) ligand 9 protein-coding common_peak2_27_169_-0.122826186119776_7.34797784307781_0.41397669133061 chr18 63708493 63709445 + 0.41397669133061 NA intron (NM_001014981, intron 1 of 27) intron (NM_001014981, intron 1 of 27) 274 NM_001014981 104082 Mm.30850 NM_001014981 ENSMUSG00000040560 Wdr7 AI462727|TRAG|mKIAA0541 WD repeat domain 7 protein-coding common_peak1_27_169_-0.122826186119776_7.34797784307781_0.41397669133061 chr7 45715397 45716030 + 0.41397669133061 NA promoter-TSS (NM_020011) promoter-TSS (NM_020011) -506 NM_020011 56632 Mm.24222 NM_020011 ENSMUSG00000057342 Sphk2 C76851 sphingosine kinase 2 protein-coding common_peak2_79_542_0.0595504621991267_9.11458361890393_0.413924032931255 chr1 92815237 92817102 + 0.413924032931255 NA Intergenic Intergenic -15517 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak1_123_1001_-0.0487599660881894_9.94428681015111_0.413907434357476 chr14 122982576 122984089 + 0.413907434357476 NA promoter-TSS (NM_028651) promoter-TSS (NM_028651) -71 NM_028651 70551 Mm.271988 NM_028651 ENSMUSG00000041594 Tmtc4 4930403J22Rik|5730419O14Rik transmembrane and tetratricopeptide repeat containing 4 protein-coding common_peak2_136_1129_-0.0457695007676904_10.1192223069187_0.413904091633532 chr17 55877836 55879642 + 0.413904091633532 NA intron (NM_144546, intron 1 of 3) CpG 214 NM_144546 104349 Mm.460659 NM_144546 ENSMUSG00000057835 Zfp119a AL024077|Mzf13|Zfp119 zinc finger protein 119a protein-coding common_peak1_120_909_0.0468441095493901_9.85314478986075_0.413895477539203 chr7 127091403 127093112 + 0.413895477539203 NA exon (NM_178901, exon 2 of 2) exon (NM_178901, exon 2 of 2) 821 NM_178901 101602 Mm.490357 NM_178901 ENSMUSG00000045165 AI467606 - expressed sequence AI467606 protein-coding common_peak2_54_338_0.0761495552495717_8.44321624076113_0.413835637902012 chr5 65866099 65868221 + 0.413835637902012 NA intron (NM_001081105, intron 1 of 2) URR1A|DNA|hAT-Charlie 3591 NM_001081105 74734 Mm.20323 NM_001081105 ENSMUSG00000029204 Rhoh 5830400A04Rik|AU019774|Arhh ras homolog family member H protein-coding common_peak1_61_435_-0.0748898088562644_8.73073942034879_0.413835296587313-2 chr11 118228678 118230027 + 0.413835296587313 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -16610 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_61_435_-0.0748898088562644_8.73073942034879_0.413835296587313 chr11 88116304 88117376 + 0.413835296587313 NA intron (NM_198013, intron 1 of 10) intron (NM_198013, intron 1 of 10) 17694 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_66_477_-0.0703231078310242_8.86570525406524_0.41380792170469 chr5 23843440 23844851 + 0.41380792170469 NA promoter-TSS (NM_025394) promoter-TSS (NM_025394) 0 NM_025394 66169 Mm.291868 NM_025394 ENSMUSG00000028998 Tomm7 1110020J08Rik|AW047273|Tom7 translocase of outer mitochondrial membrane 7 homolog (yeast) protein-coding common_peak1_45_270_0.0829240739259944_8.12361107831687_0.413714554317009 chr7 118116259 118116952 + 0.413714554317009 NA promoter-TSS (NM_170669) promoter-TSS (NM_170669) -458 NM_170669 267019 Mm.288212 NM_170669 ENSMUSG00000008683 Rps15a A630031B11Rik ribosomal protein S15A protein-coding common_peak2_45_270_0.0829240739259944_8.12361107831687_0.413714554317009 chr16 38376159 38377382 + 0.413714554317009 NA intron (NM_001081984, intron 3 of 3) intron (NM_001081984, intron 3 of 3) 14580 NM_022318 64082 Mm.390856 NM_022318 ENSMUSG00000022803 Popdc2 AV006127|Pop2 popeye domain containing 2 protein-coding common_peak2_143_1199_-0.044296395064146_10.2066704929638_0.413605153227855 chr3 146520483 146522129 + 0.413605153227855 NA exon (NM_027371, exon 1 of 9) exon (NM_027371, exon 1 of 9) 117 NM_027332 70285 Mm.28128 NM_027332 ENSMUSG00000028187 Rpf1 2210420E24Rik|2310066N05Rik|Bxdc5 ribosome production factor 1 homolog protein-coding common_peak2_140_1100_0.0426668500149336_10.1259321785718_0.413398796951653 chr17 34897883 34900286 + 0.413398796951653 NA exon (NM_001286573, exon 1 of 26) exon (NM_001286573, exon 1 of 26) 110 NM_145830 110147 Mm.35345 NM_145830 ENSMUSG00000013787 Ehmt2 Bat8|D17Ertd710e|G9a|KMT1C|NG36 euchromatic histone lysine N-methyltransferase 2 protein-coding common_peak1_74_500_0.0614829150944587_8.99940825074244_0.413327717971155 chr4 83525491 83526297 + 0.413327717971155 NA intron (NM_001081012, intron 1 of 25) intron (NM_001081012, intron 1 of 25) 349 NM_001081012 320226 Mm.180032 NM_029117 ENSMUSG00000052407 Ccdc171 4930418J05Rik|4930473A06Rik|A330015D16Rik coiled-coil domain containing 171 protein-coding common_peak1_29_157_0.1048756844206_7.3562185903874_0.413285520428535 chr13 119408741 119409321 + 0.413285520428535 NA promoter-TSS (NM_008710) promoter-TSS (NM_008710) -20 NM_008710 18115 Mm.132584 NM_008710 ENSMUSG00000025453 Nnt 4930423F13Rik|AI323702|BB168308 nicotinamide nucleotide transhydrogenase protein-coding common_peak2_105_828_-0.0528742148662822_9.66879118406261_0.413279842451946 chr6 99247053 99249648 + 0.413279842451946 NA intron (NM_001197321, intron 2 of 17) intron (NM_001197321, intron 2 of 17) 18165 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_85_593_0.0580203606395386_9.24332930112054_0.413108168404932 chr6 125876684 125877180 + 0.413108168404932 NA intron (NM_153589, intron 13 of 25) (CATTC)n|Simple_repeat|Simple_repeat 186513 NM_153589 243634 Mm.333398 NM_153589 ENSMUSG00000038115 Ano2 BC033409|Tmem16b anoctamin 2 protein-coding common_peak2_85_593_0.0580203606395386_9.24332930112054_0.413108168404932 chr14 36961060 36963248 + 0.413108168404932 NA intron (NM_027045, intron 1 of 10) intron (NM_027045, intron 1 of 10) 6610 NM_027045 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding common_peak2_378_3877_-0.0240657282187868_11.9090642239974_0.413091761089634 chr15 80797426 80802421 + 0.413091761089634 NA intron (NM_177124, intron 1 of 21) intron (NM_177124, intron 1 of 21) 1313 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak2_263_2398_0.0289394389265141_11.2426871617567_0.413055941760553 chr3 142558821 142561684 + 0.413055941760553 NA promoter-TSS (NM_001289493) promoter-TSS (NM_001289493) 200 NM_001289492 55932 Mm.439718 NM_018734 ENSMUSG00000028268 Gbp3 AW228655|GBP-3|GBP-4|Gbp4 guanylate binding protein 3 protein-coding common_peak2_59_378_0.0692147056129677_8.60066139097758_0.412973958358016 chr12 82250382 82252326 + 0.412973958358016 NA intron (NM_001167983, intron 2 of 23) intron (NM_001167983, intron 2 of 23) -59995 NM_172579 217692 Mm.261333 NM_172579 ENSMUSG00000042700 Sipa1l1 4931426N11Rik|AW213287|Spar|mKIAA0440 signal-induced proliferation-associated 1 like 1 protein-coding common_peak1_59_378_0.0692147056129677_8.60066139097758_0.412973958358016 chr5 106824794 106826161 + 0.412973958358016 NA Intergenic Intergenic 100413 NM_177873 330149 Mm.121664 NM_177873 ENSMUSG00000043410 Hfm1 A330009G12Rik|Gm1046|Mer3|Sec63d1 HFM1, ATP-dependent DNA helicase homolog protein-coding common_peak1_183_1532_0.0361557559938017_10.6002198596557_0.412964661344417 chr14 25503682 25506782 + 0.412964661344417 NA intron (NM_001310666, intron 2 of 23) intron (NM_001310666, intron 2 of 23) -29207 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak2_22_112_0.118281841678322_6.87931988325435_0.412878588947788 chrX 13461069 13461696 + 0.412878588947788 NA Intergenic Intergenic -6290 NM_173415 236690 Mm.90233 NM_173415 ENSMUSG00000051228 Nyx CLNP|CSNB1|CSNB4|nob nyctalopin protein-coding common_peak1_22_112_0.118281841678322_6.87931988325435_0.412878588947788-2 chr5 134615717 134616208 + 0.412878588947788 NA promoter-TSS (NM_020044) promoter-TSS (NM_020044) -937 NM_020044 56743 Mm.391375 NM_020044 ENSMUSG00000040751 Lat2 AW125574|LAB|NTAL|WSCR5|Wbscr15|Wbscr5 linker for activation of T cells family, member 2 protein-coding common_peak1_22_112_0.118281841678322_6.87931988325435_0.412878588947788 chr12 86823094 86823555 + 0.412878588947788 NA Intergenic B3A|SINE|B2 61490 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak2_52_360_-0.0801132614440583_8.45579839616514_0.412869874152145 chr9 72459338 72461496 + 0.412869874152145 NA 3' UTR (NM_009359, exon 12 of 12) 3' UTR (NM_009359, exon 12 of 12) 21888 NM_008613 17427 Mm.387671 NM_008613 ENSMUSG00000032221 Mns1 AW546487 meiosis-specific nuclear structural protein 1 protein-coding common_peak1_134_1042_0.0437897111981496_10.0484182981188_0.412736619685009 chr14 50930155 50931678 + 0.412736619685009 NA promoter-TSS (NM_001033271) promoter-TSS (NM_001033271) -67 NM_001310507 219024 Mm.239117 NM_001033271 ENSMUSG00000035953 Tmem55b BC039161 transmembrane protein 55b protein-coding common_peak2_121_919_0.0456417112889529_9.86831090658885_0.412687602849452 chr18 60746403 60749230 + 0.412687602849452 NA Intergenic Intergenic -26780 NM_020600 20044 Mm.43778 NM_020600 ENSMUSG00000024608 Rps14 2600014J02Rik|AL023078 ribosomal protein S14 protein-coding common_peak1_41_241_0.0852237177102602_7.96147509612972_0.412675098673405 chr18 46526074 46526826 + 0.412675098673405 NA promoter-TSS (NM_173423) promoter-TSS (NM_173423) -479 NM_173423 240263 Mm.38249 NM_173423 ENSMUSG00000033319 Fem1c 2610312A07Rik|3632443A22Rik|AI646567 fem-1 homolog c (C.elegans) protein-coding common_peak2_176_1460_0.0369204583916112_10.5312006919993_0.412652339919977 chr17 56659888 56662332 + 0.412652339919977 NA intron (NM_175350, intron 18 of 21) intron (NM_175350, intron 18 of 21) -12115 NM_001252466 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding common_peak1_268_2556_-0.0298773236726415_11.3052977834053_0.412630377619002 chr11 3104249 3106487 + 0.412630377619002 NA Intergenic IAPLTR3-int|LTR|ERVK -18653 NR_003517 236604 Mm.247625 NM_001004146 Pisd-ps1 - phosphatidylserine decarboxylase, pseudogene 1 pseudo common_peak2_500_5297_0.0196489934716197_12.3810566251054_0.412494921387815 chr10 39465997 39475749 + 0.412494921387815 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 101074 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_195_1741_-0.0364280493154681_10.7483148839411_0.412383847476293 chr11 115405407 115410028 + 0.412383847476293 NA intron (NM_026729, intron 2 of 5) intron (NM_026729, intron 2 of 5) 3951 NM_026729 68572 Mm.271062 NM_026729 ENSMUSG00000018858 Mrpl58 1110001A02Rik|1110002E03Rik|Ict1|MRP-L58 mitochondrial ribosomal protein L58 protein-coding common_peak2_35_227_-0.101592341105718_7.78209384361188_0.41234580559457 chr12 83520321 83521235 + 0.41234580559457 NA intron (NM_030246, intron 1 of 13) intron (NM_030246, intron 1 of 13) 312 NM_030246 73828 Mm.38238 NM_030246 ENSMUSG00000021222 Dcaf4 1110018E21Rik|Wdr21 DDB1 and CUL4 associated factor 4 protein-coding common_peak1_35_227_-0.101592341105718_7.78209384361188_0.41234580559457-3 chr3 97628241 97628990 + 0.41234580559457 NA promoter-TSS (NM_001161765) promoter-TSS (NM_001161765) -189 NM_001161763 14263 Mm.385180 NM_010232 ENSMUSG00000028088 Fmo5 5033418D19Rik|AI195026 flavin containing monooxygenase 5 protein-coding common_peak1_37_212_0.0922668943574081_7.78084306740454_0.41234580559457 chr1 173673613 173674295 + 0.41234580559457 NA 5' UTR (NM_001162938, exon 1 of 7) 5' UTR (NM_001162938, exon 1 of 7) 274 NM_001162938 100033459 Mm.303377 NM_001162938 ENSMUSG00000066677 Ifi208 9830148g24rik|E430029J22Rik|Pydc3|Pyr-rv1 interferon activated gene 208 protein-coding common_peak2_35_227_-0.101592341105718_7.78209384361188_0.41234580559457-2 chr9 65460742 65461721 + 0.41234580559457 NA intron (NM_138584, intron 1 of 8) CpG 294 NM_138584 27965 Mm.272475 NM_138584 ENSMUSG00000032388 Spg21 ACP33|BM-019|C78576|D9Wsu18e|GL010|MAST spastic paraplegia 21 homolog (human) protein-coding common_peak1_35_227_-0.101592341105718_7.78209384361188_0.41234580559457-2 chr2 166123577 166124240 + 0.41234580559457 NA intron (NM_001252579, intron 2 of 20) intron (NM_001252579, intron 2 of 20) 31377 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak1_35_227_-0.101592341105718_7.78209384361188_0.41234580559457 chr12 102293076 102293764 + 0.41234580559457 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 9779 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak2_37_212_0.0922668943574081_7.78084306740454_0.41234580559457 chrX 113867521 113868914 + 0.41234580559457 NA Intergenic Intergenic 569961 NM_001142570 93837 Mm.79760 NM_033605 ENSMUSG00000025592 Dach2 9430028N04Rik dachshund 2 (Drosophila) protein-coding common_peak1_39_258_-0.0990617488694223_7.96727741325184_0.412228365422899 chr11 107296474 107297257 + 0.412228365422899 NA intron (NM_145823, intron 4 of 9) B1_Mur4|SINE|Alu -107484 NM_001161329 68979 Mm.294617 NM_133702 ENSMUSG00000018433 Nol11 1500002M01Rik|AU015220|AU019874 nucleolar protein 11 protein-coding common_peak1_39_258_-0.0990617488694223_7.96727741325184_0.412228365422899-2 chrX 167049813 167050549 + 0.412228365422899 NA Intergenic ID_B1|SINE|B4 20189 NM_001101606 667794 Mm.302232 NM_001101606 Gm8817 EG667794 predicted gene 8817 protein-coding common_peak1_57_401_-0.075776065480003_8.61316365843893_0.412114865200076 chr1 167349890 167350711 + 0.412114865200076 NA exon (NM_019993, exon 1 of 11) exon (NM_019993, exon 1 of 11) 309 NM_019993 56752 Mm.292539 NM_019993 ENSMUSG00000026687 Aldh9a1 AA139417|Abaldh|ESTM40|TMABA-DH|Tmabadh aldehyde dehydrogenase 9, subfamily A1 protein-coding common_peak2_50_308_0.0762077492230819_8.30956690251591_0.412016053894504 chr15 81927384 81929045 + 0.412016053894504 NA Intergenic Intergenic -2001 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding common_peak1_274_2522_0.0284721142879363_11.3151605481203_0.411885619983509 chr17 53478573 53480484 + 0.411885619983509 NA 5' UTR (NM_025887, exon 1 of 6) 5' UTR (NM_025887, exon 1 of 6) 294 NM_025887 271457 Mm.329123 NM_025887 ENSMUSG00000017831 Rab5a 2410015H04Rik|AI663973|AU021172|nnyRab5a RAB5A, member RAS oncogene family protein-coding common_peak1_19_93_0.136545375953139_6.62286153965421_0.411867520083741-2 chr8 122954210 122954748 + 0.411867520083741 NA intron (NR_037865, intron 2 of 13) intron (NR_037865, intron 2 of 13) 87805 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak2_19_93_0.136545375953139_6.62286153965421_0.411867520083741-2 chr10 117111371 117112216 + 0.411867520083741 NA intron (NM_177798, intron 1 of 9) MLT1N2|LTR|ERVL-MaLR 36681 NM_177798 327826 Mm.135965 NM_177798 ENSMUSG00000020170 Frs2 4732458E18|C330018A15Rik|Frs2alpha|SNT1 fibroblast growth factor receptor substrate 2 protein-coding common_peak2_19_93_0.136545375953139_6.62286153965421_0.411867520083741 chr14 27317359 27318120 + 0.411867520083741 NA intron (NM_001289686, intron 4 of 12) intron (NM_001289686, intron 4 of 12) -18298 NM_001289687 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_19_93_0.136545375953139_6.62286153965421_0.411867520083741 chr16 44355880 44356344 + 0.411867520083741 NA intron (NM_144550, intron 2 of 17) intron (NM_144550, intron 2 of 17) 8711 NM_144550 212514 Mm.24035 NM_144550 ENSMUSG00000043065 Spice1 Ccdc52|D16Ertd480e spindle and centriole associated protein 1 protein-coding unique_peak2_19_93_0.136545375953139_6.62286153965421_0.411867520083741-3 chr15 74967750 74968502 + 0.411867520083741 NA Intergenic Intergenic 13020 NM_001164040 17069 Mm.788 NM_008529 ENSMUSG00000022587 Ly6e Ly67|RIG-E|Sca-2|TSA-1|Tsa1 lymphocyte antigen 6 complex, locus E protein-coding unique_peak2_19_93_0.136545375953139_6.62286153965421_0.411867520083741 chr10 20100887 20101905 + 0.411867520083741 NA intron (NM_008580, intron 17 of 29) Lx9|LINE|L1 -47524 NM_008635 17761 Mm.20928 NM_008635 ENSMUSG00000019996 Map7 E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste microtubule-associated protein 7 protein-coding unique_peak2_19_93_0.136545375953139_6.62286153965421_0.411867520083741-4 chr7 48996585 48997328 + 0.411867520083741 NA intron (NM_001111016, intron 2 of 38) MTE2b|LTR|ERVL-MaLR 37883 NM_001111016 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_62_443_-0.0728067063983229_8.75801251315094_0.411748310589918 chr14 14120092 14121184 + 0.411748310589918 NA intron (NM_025550, intron 1 of 7) CpG 266 NM_025550 66413 Mm.27591 NM_025550 ENSMUSG00000021737 Psmd6 2400006A19Rik proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 protein-coding common_peak1_142_1120_0.0416197837770014_10.1513804546939_0.411422064306732 chr5 140704133 140705857 + 0.411422064306732 NA promoter-TSS (NM_001276287) promoter-TSS (NM_001276287) -16 NM_181066 231841 Mm.271932 NM_172724 ENSMUSG00000000148 Brat1 AA881470|Baat1 BRCA1-associated ATM activator 1 protein-coding common_peak1_13_59_0.153061843223051_5.98342151722004_0.411401232354538 chrX 73714970 73715348 + 0.411401232354538 NA intron (NM_001313698, intron 1 of 7) intron (NM_001313698, intron 1 of 7) 1045 NM_012060 27061 Mm.17 NM_012060 ENSMUSG00000002015 Bcap31 Bap31 B cell receptor associated protein 31 protein-coding common_peak1_156_1258_0.0394130666866328_10.3177691010623_0.411309054704445 chr6 11906906 11908387 + 0.411309054704445 NA promoter-TSS (NM_010886) promoter-TSS (NM_010886) -200 NM_010886 17992 Mm.415865 NM_010886 ENSMUSG00000029632 Ndufa4 MLRQ NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 protein-coding common_peak2_55_346_0.0743852086260208_8.47598445689127_0.411296502804748 chr8 124290711 124292449 + 0.411296502804748 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 60186 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_55_346_0.0743852086260208_8.47598445689127_0.411296502804748 chr2 29693182 29694295 + 0.411296502804748 NA intron (NM_054050, intron 5 of 23) intron (NM_054050, intron 5 of 23) -67790 NM_001177392 433416 Mm.330112 NM_001034887 ENSMUSG00000075425 Gm13547 OTTMUSG00000012686 predicted gene 13547 protein-coding common_peak2_116_872_0.0472401221317043_9.79345790469529_0.411200138211586 chr3 20057132 20058647 + 0.411200138211586 NA promoter-TSS (NR_105047) promoter-TSS (NR_105047) 78 NM_009210 20585 Mm.209650 NM_009210 ENSMUSG00000002428 Hltf AF010600|BC057116|P113|Smarca3|Snf2l3 helicase-like transcription factor protein-coding unique_peak2_24_148_-0.133153328325777_7.15259185629927_0.411165607679114 chr18 82535181 82536275 + 0.411165607679114 NA intron (NM_010777, intron 3 of 6) intron (NM_010777, intron 3 of 6) -18735 NM_001025256 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_24_148_-0.133153328325777_7.15259185629927_0.411165607679114 chr15 79752647 79753144 + 0.411165607679114 NA non-coding (NR_045069, exon 4 of 4) non-coding (NR_045069, exon 4 of 4) 10197 NR_045069 100504191 Mm.421420 NR_045069 ENSMUSG00000087543 Gm16576 - predicted gene 16576 ncRNA common_peak1_24_148_-0.133153328325777_7.15259185629927_0.411165607679114-2 chr18 32837334 32837823 + 0.411165607679114 NA promoter-TSS (NR_045381) promoter-TSS (NR_045381) -291 NR_045381 75795 Mm.382634 NR_045381 ENSMUSG00000097553 4930455D15Rik - RIKEN cDNA 4930455D15 gene ncRNA common_peak2_267_2443_0.0287397527037054_11.2693984461706_0.411013258773205 chr11 84817994 84820233 + 0.411013258773205 NA exon (NM_145433, exon 1 of 5) exon (NM_145433, exon 1 of 5) 402 NM_145433 217038 Mm.280825 NM_145433 ENSMUSG00000018405 Mrm1 A530065E19Rik|ENSMUSG00000054212 mitochondrial rRNA methyltransferase 1 protein-coding common_peak1_70_467_0.0627948262636124_8.90176213271521_0.410976170303169 chr17 72934283 72935703 + 0.410976170303169 NA intron (NM_029999, intron 2 of 2) intron (NM_029999, intron 2 of 2) 16688 NM_029999 77889 Mm.154109 NM_029999 ENSMUSG00000024063 Lbh 1810009F10Rik|6720416L16Rik limb-bud and heart protein-coding common_peak2_70_467_0.0627948262636124_8.90176213271521_0.410976170303169 chr14 121897770 121900064 + 0.410976170303169 NA intron (NM_026861, intron 1 of 8) intron (NM_026861, intron 1 of 8) 16857 NM_182806 110168 Mm.37405 NM_182806 ENSMUSG00000050350 Gpr18 - G protein-coupled receptor 18 protein-coding common_peak2_70_467_0.0627948262636124_8.90176213271521_0.410976170303169-2 chr7 19457794 19459386 + 0.410976170303169 NA promoter-TSS (NM_172279) promoter-TSS (NM_172279) -96 NM_172279 232944 Mm.260504 NM_172279 ENSMUSG00000030397 Mark4 2410090P21Rik|C79806|Markl1 MAP/microtubule affinity regulating kinase 4 protein-coding common_peak1_113_904_-0.0506629512340364_9.79644250635355_0.410952262820595 chr8 46686802 46687558 + 0.410952262820595 NA Intergenic Intergenic 52335 NR_045750 100503498 Mm.187358 NR_045750 ENSMUSG00000097534 Gm16675 - predicted gene, 16675 ncRNA common_peak2_78_581_-0.0627762517949666_9.1534872170108_0.410947468622177 chr4 154011149 154012856 + 0.410947468622177 NA exon (NM_201226, exon 1 of 7) exon (NM_201226, exon 1 of 7) 199 NM_201226 72946 Mm.260690 NM_201226 ENSMUSG00000029028 Lrrc47 2900010D03Rik|AA960559|mKIAA1185 leucine rich repeat containing 47 protein-coding common_peak2_622_6933_0.0170823568268244_12.7680132996162_0.410865134833856 chr15 36790954 36795533 + 0.410865134833856 NA intron (NM_001253806, intron 1 of 5) CpG 1295 NM_011740 22631 Mm.3360 NM_011740 ENSMUSG00000022285 Ywhaz 1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein-coding common_peak2_98_708_0.051812646574648_9.49554814052684_0.410738642116393 chr5 147049925 147051774 + 0.410738642116393 NA intron (NM_080795, intron 1 of 9) intron (NM_080795, intron 1 of 9) 25723 NM_080795 140887 Mm.272203 NM_080795 ENSMUSG00000016520 Lnx2 9630046H24|AW209022 ligand of numb-protein X 2 protein-coding common_peak1_65_426_0.0658399992267462_8.77101225923386_0.410733513091185 chr17 27792625 27793807 + 0.410733513091185 NA intron (NM_001044719, intron 2 of 4) intron (NM_001044719, intron 2 of 4) 27326 NM_001033279 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak2_46_278_0.0790097755968304_8.1636261996276_0.410567102594054-2 chr6 90604403 90605499 + 0.410567102594054 NA promoter-TSS (NM_027868) promoter-TSS (NM_027868) 71 NM_027868 71699 Mm.272633 NM_027868 ENSMUSG00000030089 Slc41a3 1010001P06Rik|AI480742|SLC41A1-L2 solute carrier family 41, member 3 protein-coding common_peak2_46_278_0.0790097755968304_8.1636261996276_0.410567102594054 chr13 13377835 13379526 + 0.410567102594054 NA intron (NM_031999, intron 1 of 6) intron (NM_031999, intron 1 of 6) 14944 NM_031999 83924 Mm.379269 NM_031999 ENSMUSG00000021306 Gpr137b AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1 G protein-coupled receptor 137B protein-coding common_peak2_194_1647_0.0345485093029616_10.7037747818347_0.410485380219415 chr12 21372727 21374593 + 0.410485380219415 NA promoter-TSS (NM_001291871) promoter-TSS (NM_001291871) -28 NM_009615 11491 Mm.27681 NM_009615 ENSMUSG00000052593 Adam17 CD156b|Tace a disintegrin and metallopeptidase domain 17 protein-coding common_peak1_123_938_0.0449254794532443_9.8974440873804_0.410462449897239 chr11 21570924 21572648 + 0.410462449897239 NA promoter-TSS (NM_145425) promoter-TSS (NM_145425) 148 NM_008618 17449 Mm.212703 NM_008618 ENSMUSG00000020321 Mdh1 B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2 malate dehydrogenase 1, NAD (soluble) protein-coding common_peak1_26_137_0.113683110061426_7.16536601180888_0.410394974512921-3 chr9 99009328 99009914 + 0.410394974512921 NA intron (NM_001080776, intron 6 of 7) B3|SINE|B2 23248 NM_011810 23873 Mm.74605 NM_011810 ENSMUSG00000032463 Faim - Fas apoptotic inhibitory molecule protein-coding common_peak1_26_137_0.113683110061426_7.16536601180888_0.410394974512921 chr6 99051010 99051619 + 0.410394974512921 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) -23016 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_26_137_0.113683110061426_7.16536601180888_0.410394974512921 chr2 101885890 101886720 + 0.410394974512921 NA promoter-TSS (NM_029635) promoter-TSS (NM_029635) 43 NM_029635 76501 Mm.330424 NM_029635 ENSMUSG00000027163 Commd9 1810029F08Rik|AA409293 COMM domain containing 9 protein-coding common_peak2_26_137_0.113683110061426_7.16536601180888_0.410394974512921 chr5 36712808 36713678 + 0.410394974512921 NA Intergenic Intergenic -17222 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak1_26_137_0.113683110061426_7.16536601180888_0.410394974512921-2 chr8 71485458 71486016 + 0.410394974512921 NA intron (NM_001164679, intron 1 of 16) CpG 330 NM_001164679 382014 Mm.260360 NM_001164679 ENSMUSG00000034863 Ano8 BC053460|Tmem16h anoctamin 8 protein-coding common_peak1_16_76_0.136749720279271_6.33516140083454_0.410334955492133 chr11 69419892 69420278 + 0.410334955492133 NA TTS (NM_001081330) TTS (NM_001081330) -6410 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding unique_peak2_16_76_0.136749720279271_6.33516140083454_0.410334955492133-2 chr5 38598176 38598709 + 0.410334955492133 NA Intergenic IAPLTR2_Mm|LTR|ERVK -36847 NM_011715 22388 Mm.2654 NM_011715 ENSMUSG00000005103 Wdr1 Aip1|D5Wsu185e|rede WD repeat domain 1 protein-coding common_peak1_16_76_0.136749720279271_6.33516140083454_0.410334955492133-3 chr5 122163572 122164007 + 0.410334955492133 NA intron (NM_013636, intron 1 of 6) B1_Mus2|SINE|Alu 5510 NM_013636 19047 Mm.280784 NM_013636 ENSMUSG00000004455 Ppp1cc PP-1G|PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform protein-coding common_peak1_16_76_0.136749720279271_6.33516140083454_0.410334955492133-2 chr11 107443273 107443737 + 0.410334955492133 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 27215 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding unique_peak2_16_76_0.136749720279271_6.33516140083454_0.410334955492133 chr2 164899164 164899885 + 0.410334955492133 NA intron (NM_199027, intron 14 of 27) intron (NM_199027, intron 14 of 27) 12226 NM_199027 329559 Mm.330776 NM_199027 ENSMUSG00000039834 Zfp335 1810045J01Rik|NIF-1|Nif1|Znf335 zinc finger protein 335 protein-coding common_peak1_16_76_0.136749720279271_6.33516140083454_0.410334955492133-4 chr9 50905116 50905584 + 0.410334955492133 NA intron (NM_178710, intron 9 of 15) intron (NM_178710, intron 9 of 15) 48426 NM_001286553 73699 Mm.7726 NM_028614 ENSMUSG00000032058 Ppp2r1b 2410091N08Rik|AI790395 protein phosphatase 2, regulatory subunit A, beta protein-coding common_peak1_44_296_-0.0881404832361348_8.1702488791827_0.410185992695116-2 chr11 116418246 116419020 + 0.410185992695116 NA Intergenic Intergenic -5601 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak2_44_296_-0.0881404832361348_8.1702488791827_0.410185992695116 chr1 87606978 87608567 + 0.410185992695116 NA Intergenic Intergenic -12540 NM_001110192 16331 Mm.15105 NM_010566 ENSMUSG00000026288 Inpp5d SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP inositol polyphosphate-5-phosphatase D protein-coding common_peak1_44_296_-0.0881404832361348_8.1702488791827_0.410185992695116 chr11 95350217 95351198 + 0.410185992695116 NA intron (NM_172543, intron 1 of 7) intron (NM_172543, intron 1 of 7) 13689 NM_172543 215512 Mm.262113 NM_172543 ENSMUSG00000038893 Fam117a 5730593F17Rik|AW548096 family with sequence similarity 117, member A protein-coding common_peak2_140_1168_-0.0437936109523527_10.1691624090555_0.410079230205923 chr11 79703384 79705241 + 0.410079230205923 NA Intergenic CpG -7657 NR_029579 387188 NR_029579 ENSMUSG00000065395 Mir193a Mir193|Mirn193|mir-193a|mmu-mir-193|mmu-mir-193a microRNA 193a ncRNA common_peak1_172_1419_0.0375353171005042_10.4904428729423_0.410059807914833 chr11 117653868 117655888 + 0.410059807914833 NA intron (NM_198022, intron 1 of 21) CpG 589 NM_198022 217351 Mm.40272 NM_198022 ENSMUSG00000025571 Tnrc6c 9930033H14Rik|mKIAA1582 trinucleotide repeat containing 6C protein-coding common_peak2_68_494_-0.0686893947201774_8.91694001760688_0.409837813274316-2 chr9 104261940 104263678 + 0.409837813274316 NA 5' UTR (NM_001163026, exon 1 of 56) 5' UTR (NM_001163026, exon 1 of 56) 121 NM_001163026 235567 Mm.217256 NM_001163026 ENSMUSG00000032560 Dnajc13 D030002L11Rik|Gm1124|RME-8|Rme8|mKIAA0678 DnaJ heat shock protein family (Hsp40) member C13 protein-coding common_peak2_68_494_-0.0686893947201774_8.91694001760688_0.409837813274316 chr2 48467566 48469843 + 0.409837813274316 NA Intergenic Intergenic -345405 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding common_peak1_63_451_-0.0707010769173078_8.78482842395653_0.409737150799156 chr9 104262243 104263387 + 0.409737150799156 NA 5' UTR (NM_001163026, exon 1 of 56) 5' UTR (NM_001163026, exon 1 of 56) 115 NM_001163026 235567 Mm.217256 NM_001163026 ENSMUSG00000032560 Dnajc13 D030002L11Rik|Gm1124|RME-8|Rme8|mKIAA0678 DnaJ heat shock protein family (Hsp40) member C13 protein-coding common_peak2_63_451_-0.0707010769173078_8.78482842395653_0.409737150799156 chr7 45569686 45571207 + 0.409737150799156 NA promoter-TSS (NM_001243052) promoter-TSS (NM_001243052) 293 NM_009737 12036 Mm.24210 NM_009737 ENSMUSG00000030826 Bcat2 Bcat-2|Eca40 branched chain aminotransferase 2, mitochondrial protein-coding common_peak2_111_826_0.0480458532193619_9.71576644578096_0.409673594288073 chr11 78535503 78537326 + 0.409673594288073 NA promoter-TSS (NM_018854) promoter-TSS (NM_018854) -22 NM_018854 55978 Mm.358671 NM_018854 ENSMUSG00000001105 Ift20 0610009H04Rik|AU015496 intraflagellar transport 20 protein-coding common_peak1_42_248_0.0857252381858702_8.00286455116102_0.409621294534083 chr13 37657291 37657820 + 0.409621294534083 NA Intergenic Intergenic -168483 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak1_58_410_-0.0774681786398581_8.64426049436175_0.409614928720443 chr11 80575068 80575982 + 0.409614928720443 NA intron (NM_177390, intron 20 of 21) intron (NM_177390, intron 20 of 21) -66419 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA common_peak2_108_856_-0.0514091585828638_9.71744681482107_0.409544474432081 chr13 38959733 38961229 + 0.409544474432081 NA promoter-TSS (NM_001170430) promoter-TSS (NM_001170430) 56 NM_001170430 108652 Mm.255506 NM_134060 ENSMUSG00000021432 Slc35b3 4921526O06Rik|AI428480|CGI-19|PABST2|PAPST2 solute carrier family 35, member B3 protein-coding common_peak1_151_1209_0.0394098047940012_10.260496234559_0.409474511190052 chr9 70011919 70013445 + 0.409474511190052 NA 5' UTR (NM_001282083, exon 1 of 5) 5' UTR (NM_001282083, exon 1 of 5) 134 NM_001282083 235459 Mm.293117 NM_199151 ENSMUSG00000033543 Gtf2a2 TFIIA-gamma|TfIIg|Tfiia2 general transcription factor II A, 2 protein-coding common_peak2_102_800_-0.0541105486319715_9.61860315809272_0.40933307445787 chr10 45577554 45578829 + 0.40933307445787 NA intron (NM_172473, intron 1 of 23) CpG 362 NM_172473 209462 Mm.458633 NM_172473 ENSMUSG00000038822 Hace1 1700042J16Rik|A730034A22Rik|BC025474 HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 protein-coding common_peak1_28_176_-0.118942235570429_7.40813443229778_0.4093098880443 chr8 25840513 25840911 + 0.4093098880443 NA promoter-TSS (NM_011791) promoter-TSS (NM_011791) 75 NM_011791 23808 Mm.27706 NM_011791 ENSMUSG00000031575 Ash2l - ash2 (absent, small, or homeotic)-like (Drosophila) protein-coding common_peak2_51_316_0.0736945256878805_8.34518629298335_0.409283381873789 chr6 125098573 125100209 + 0.409283381873789 NA intron (NM_145979, intron 2 of 38) intron (NM_145979, intron 2 of 38) 2367 NR_106012 102466272 NR_106012 ENSMUSG00000098762 Mir7045 Gm27758|mmu-mir-7045 microRNA 7045 ncRNA unique_peak2_40_265_-0.0938391704357633_8.00836285028331_0.409198623470963 chr11 118341726 118343413 + 0.409198623470963 NA promoter-TSS (NM_021440) promoter-TSS (NM_021440) -35 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 BC100451 Cep295nl|Ddc8|FS39|Kiaa1731nl cDNA sequence BC100451 protein-coding common_peak1_21_127_-0.140202257306049_6.92989887134698_0.409193769350563-3 chr18 69594176 69594629 + 0.409193769350563 NA intron (NM_001083967, intron 8 of 19) intron (NM_001083967, intron 8 of 19) 248681 NM_001083967 21413 Mm.4269 NM_013685 ENSMUSG00000053477 Tcf4 5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19 transcription factor 4 protein-coding common_peak1_21_127_-0.140202257306049_6.92989887134698_0.409193769350563 chr11 63977339 63977931 + 0.409193769350563 NA intron (NM_178379, intron 5 of 6) intron (NM_178379, intron 5 of 6) 13409 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak1_21_127_-0.140202257306049_6.92989887134698_0.409193769350563-2 chr12 102876867 102877304 + 0.409193769350563 NA intron (NM_172806, intron 1 of 11) intron (NM_172806, intron 1 of 11) 1321 NM_172806 238386 Mm.63456 NM_172806 ENSMUSG00000041702 Btbd7 5730507E09Rik|8030448M07|E130118E17Rik|FUP1|mKIAA1525 BTB (POZ) domain containing 7 protein-coding common_peak2_212_1838_0.0325882975883633_10.8609999132061_0.408992941323315 chr19 3904595 3907720 + 0.408992941323315 NA promoter-TSS (NM_016921) promoter-TSS (NM_016921) 826 NM_001167784 27060 Mm.271689 NM_016921 ENSMUSG00000001750 Tcirg1 ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 protein-coding common_peak2_66_434_0.065672109413633_8.79770764544291_0.408758725838836 chr18 62163409 62165259 + 0.408758725838836 NA Intergenic L3|LINE|CR1 15647 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak2_30_164_0.10035999048849_7.41650220949006_0.408674506502026 chr2 128197624 128198432 + 0.408674506502026 NA Intergenic Intergenic 70453 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_145_1150_0.040259219439756_10.1888017278521_0.408584018514928 chr6 3396733 3399675 + 0.408584018514928 NA intron (NM_010156, intron 1 of 1) URR1B|DNA|hAT-Charlie 1367 NM_010156 209086 Mm.196013 NM_010156 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like protein-coding common_peak1_32_205_-0.109180579522339_7.63191023742205_0.408529312843338-3 chrX 20289759 20290423 + 0.408529312843338 NA intron (NM_177353, intron 1 of 16) intron (NM_177353, intron 1 of 16) 1673 NM_177353 236727 Mm.132983 NM_177353 ENSMUSG00000037341 Slc9a7 A530087D17Rik|NHE7 solute carrier family 9 (sodium/hydrogen exchanger), member 7 protein-coding common_peak1_34_191_0.0964832138023777_7.63320410762234_0.408529312843338 chr13 110557914 110558628 + 0.408529312843338 NA Intergenic Intergenic 163227 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo-like kinase 2 protein-coding common_peak1_32_205_-0.109180579522339_7.63191023742205_0.408529312843338 chr5 100728721 100729500 + 0.408529312843338 NA Intergenic Intergenic -9427 NM_152803 15442 Mm.265786 NM_152803 ENSMUSG00000035273 Hpse HSE1|Hpa|Hpr1 heparanase protein-coding common_peak1_32_205_-0.109180579522339_7.63191023742205_0.408529312843338-2 chr8 109863540 109864248 + 0.408529312843338 NA 3' UTR (NM_001301211, exon 23 of 23) 3' UTR (NM_001301211, exon 23 of 23) -4709 NM_001122594 244650 Mm.23494 NM_001122594 ENSMUSG00000031732 Phlpp2 AI481772|C130044A18Rik|Phlppl PH domain and leucine rich repeat protein phosphatase 2 protein-coding common_peak2_32_205_-0.109180579522339_7.63191023742205_0.408529312843338 chr11 78094156 78095284 + 0.408529312843338 NA promoter-TSS (NM_145430) promoter-TSS (NM_145430) 47 NM_145430 216971 Mm.119387 NM_145430 ENSMUSG00000037750 Fam222b 9630020I17Rik family with sequence similarity 222, member B protein-coding common_peak2_112_835_0.0481603660915173_9.73143931512664_0.408522460830071 chr4 126676834 126678546 + 0.408522460830071 NA promoter-TSS (NM_011970) promoter-TSS (NM_011970) 47 NM_011970 26445 Mm.22233 NM_011970 ENSMUSG00000028837 Psmb2 AU045357|AW108089|C7-I|D4Wsu33e|HC7-I proteasome (prosome, macropain) subunit, beta type 2 protein-coding common_peak1_103_809_-0.0531322307583437_9.63521198239282_0.408106874376175-2 chr7 99140511 99141418 + 0.408106874376175 NA 5' UTR (NM_178635, exon 1 of 15) 5' UTR (NM_178635, exon 1 of 15) 180 NM_178635 78610 Mm.323072 NM_178635 ENSMUSG00000035354 Uvrag 9530039D02Rik|AI648770|BB124205|Uvrag1|Uvragl UV radiation resistance associated gene protein-coding common_peak1_103_809_-0.0531322307583437_9.63521198239282_0.408106874376175 chr19 5799265 5800917 + 0.408106874376175 NA non-coding (NR_002847, exon 1 of 1) non-coding (NR_002847, exon 1 of 1) 2580 NR_002847 72289 Mm.298256 NR_002847 ENSMUSG00000092341 Malat1 2210401K01Rik|9430072K23Rik|AI647968|Neat2 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ncRNA common_peak2_103_809_-0.0531322307583437_9.63521198239282_0.408106874376175 chr10 79766058 79767943 + 0.408106874376175 NA promoter-TSS (NR_027505) promoter-TSS (NR_027505) -48 NR_027505 70294 Mm.466670 NM_144528 ENSMUSG00000035890 Rnf126 2610010O19Rik ring finger protein 126 protein-coding common_peak2_97_753_-0.054932165171623_9.53095463068285_0.408067948683892 chr17 13439574 13441716 + 0.408067948683892 NA Intergenic RMER10A|LTR|ERVL -80811 NR_030763 272667 Mm.444718 NR_030763 ENSMUSG00000079711 Smok4a 4930513D10Rik|Smok2c sperm motility kinase 4A pseudo common_peak2_69_502_-0.0663565640956367_8.94123630775771_0.408064677990303 chr3 108044169 108045592 + 0.408064677990303 NA promoter-TSS (NM_026764) promoter-TSS (NM_026764) -21 NM_001160411 14865 Mm.31203 NM_026764 ENSMUSG00000027890 Gstm4 1110004G14Rik|GSTM7-7|Gstb-4|Gstb4 glutathione S-transferase, mu 4 protein-coding common_peak1_54_376_-0.077129694882748_8.51985586582729_0.407986250268986 chr13 21401980 21402883 + 0.407986250268986 NA intron (NM_001145778, intron 1 of 5) intron (NM_001145778, intron 1 of 5) 324 NM_001145778 72739 Mm.296071 NM_023685 ENSMUSG00000021327 Zkscan3 2810435N07Rik|AA408594|AI132359|Skz1|Zf47|Zfp-47|Zfp306|Zfp307|mszf35 zinc finger with KRAB and SCAN domains 3 protein-coding common_peak1_47_285_0.0805164425000626_8.20012955802842_0.40795389355605-2 chrX 73342459 73343371 + 0.40795389355605 NA intron (NM_001160229, intron 1 of 4) intron (NM_001160229, intron 1 of 4) 294 NM_001160229 27081 Mm.26595 NM_031494 ENSMUSG00000031365 Zfp275 5430431L06Rik|AI593314|DXBay20|DXHXS52|DXPas8 zinc finger protein 275 protein-coding common_peak1_47_285_0.0805164425000626_8.20012955802842_0.40795389355605 chr2 120154712 120155336 + 0.40795389355605 NA promoter-TSS (NM_133838) promoter-TSS (NM_133838) -449 NM_133838 98878 Mm.132226 NM_133838 ENSMUSG00000027293 Ehd4 2210022F10Rik|AI197390|AI846352|AV006278|Past2 EH-domain containing 4 protein-coding common_peak2_47_285_0.0805164425000626_8.20012955802842_0.40795389355605 chr11 6365280 6366550 + 0.40795389355605 NA Intergenic B1_Mus1|SINE|Alu -29210 NM_001005867 52915 Mm.1144 NM_028601 ENSMUSG00000041164 Zmiz2 Zimp7 zinc finger, MIZ-type containing 2 protein-coding common_peak2_462_4806_0.0203735030836771_12.2411078396797_0.407821315499143 chr1 195241509 195242089 + 0.407821315499143 NA Intergenic CpG -65084 NM_007758 12902 Mm.235387 NM_007758 ENSMUSG00000026616 Cr2 C3DR|CD21|CD35|Cr-1|Cr-2|Cr1 complement receptor 2 protein-coding common_peak2_116_932_-0.0486553050906142_9.84140561830645_0.407595553587234 chr17 57274643 57277355 + 0.407595553587234 NA Intergenic Intergenic -3101 NM_001163816 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding common_peak1_80_599_-0.0624766075030028_9.19758038674438_0.407576438699523 chr9 65908975 65909967 + 0.407576438699523 NA promoter-TSS (NM_019797) promoter-TSS (NM_019797) 461 NM_173185 214897 Mm.325816 NM_173185 ENSMUSG00000032384 Csnk1g1 9130020E21Rik casein kinase 1, gamma 1 protein-coding common_peak2_80_599_-0.0624766075030028_9.19758038674438_0.407576438699523-2 chr17 24478258 24479611 + 0.407576438699523 NA intron (NM_001252463, intron 1 of 8) CpG 144 NM_001252464 56716 Mm.289516 NM_019988 ENSMUSG00000024142 Mlst8 0610033N12Rik|AA409454|AI505104|AI851821|Gbl MTOR associated protein, LST8 homolog (S. cerevisiae) protein-coding common_peak2_80_599_-0.0624766075030028_9.19758038674438_0.407576438699523 chr13 73330464 73331849 + 0.407576438699523 NA intron (NM_053163, intron 1 of 1) CpG 147 NM_053163 94066 Mm.26775 NM_053163 ENSMUSG00000021607 Mrpl36 AI646041 mitochondrial ribosomal protein L36 protein-coding common_peak2_64_460_-0.0717084200964422_8.81276873038112_0.407560189225939 chr7 104298702 104301013 + 0.407560189225939 NA TTS (NM_023835) TTS (NM_023835) -11751 NM_001310602 667823 Mm.482375 NM_001310602 ENSMUSG00000060441 Trim5 EG667823|Gm8833 tripartite motif-containing 5 protein-coding unique_peak2_18_107_-0.154523298766578_6.67762585278018_0.407517392375985-2 chr9 21329653 21330606 + 0.407517392375985 NA intron (NM_001199186, intron 1 of 21) MTE2b|LTR|ERVL-MaLR -7699 NM_152808 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding common_peak1_18_107_-0.154523298766578_6.67762585278018_0.407517392375985-3 chr7 25000527 25000937 + 0.407517392375985 NA exon (NM_001290469, exon 4 of 23) exon (NM_001290469, exon 4 of 23) 5205 NM_001290469 232975 Mm.44101 NM_144921 ENSMUSG00000040907 Atp1a3 Atpa-2 ATPase, Na+/K+ transporting, alpha 3 polypeptide protein-coding common_peak1_18_107_-0.154523298766578_6.67762585278018_0.407517392375985 chr1 173913373 173913907 + 0.407517392375985 NA promoter-TSS (NM_001301745) promoter-TSS (NM_001301745) -594 NM_001033450 381308 Mm.490248 NM_001033450 ENSMUSG00000026536 Ifi211 A730048F03|Ifi205b|Mnda|ifi-205-B interferon activated gene 211 protein-coding unique_peak2_18_107_-0.154523298766578_6.67762585278018_0.407517392375985 chr17 30624025 30624783 + 0.407517392375985 NA non-coding (NR_045287, exon 3 of 4) non-coding (NR_045287, exon 3 of 4) 2501 NR_045287 67522 Mm.254797 NR_045287 ENSMUSG00000099474 1700097N02Rik - RIKEN cDNA 1700097N02 gene ncRNA common_peak1_18_107_-0.154523298766578_6.67762585278018_0.407517392375985-2 chr3 95660882 95661318 + 0.407517392375985 NA 3' UTR (NM_008562, exon 3 of 3) 3' UTR (NM_008562, exon 3 of 3) 2379 NM_008562 17210 Mm.1639 NM_008562 ENSMUSG00000038612 Mcl1 AW556805|Mcl-1 myeloid cell leukemia sequence 1 protein-coding common_peak2_23_118_0.118957704784151_6.95429661570002_0.407440960255861-2 chr8 83899953 83900804 + 0.407440960255861 NA 5' UTR (NM_181039, exon 1 of 23) 5' UTR (NM_181039, exon 1 of 23) 280 NM_181039 330814 Mm.260733 NM_181039 ENSMUSG00000013033 Adgrl1 2900070I05Rik|AI182398|CLIBA|Lec2|Lphn1|mKIAA0821 adhesion G protein-coupled receptor L1 protein-coding common_peak1_23_118_0.118957704784151_6.95429661570002_0.407440960255861 chr15 66790038 66790540 + 0.407440960255861 NA intron (NM_001029841, intron 4 of 7) intron (NM_001029841, intron 4 of 7) 41540 NM_001029841 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak1_23_118_0.118957704784151_6.95429661570002_0.407440960255861-2 chr5 150592536 150593090 + 0.407440960255861 NA intron (NM_133898, intron 1 of 4) intron (NM_133898, intron 1 of 4) 1712 NM_133898 100637 Mm.279932 NM_133898 ENSMUSG00000041132 N4bp2l1 2410024N18Rik|AI428195|B230342M21Rik NEDD4 binding protein 2-like 1 protein-coding common_peak2_23_118_0.118957704784151_6.95429661570002_0.407440960255861 chr5 73265662 73266619 + 0.407440960255861 NA Intergenic Intergenic -9522 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak2_136_1128_-0.0444922142381419_10.1185836636539_0.407409676889151 chr1 74505119 74507300 + 0.407409676889151 NA promoter-TSS (NM_001310662) promoter-TSS (NM_001310662) 149 NM_021383 58184 Mm.291708 NM_021383 ENSMUSG00000026174 Cnot9 2610007F23Rik|AI593551|Fl10|Rqcd1 CCR4-NOT transcription complex, subunit 9 protein-coding common_peak1_113_845_0.0465971776165812_9.74781244192824_0.407271701962648 chr8 25653363 25654848 + 0.407271701962648 NA intron (NM_001081269, intron 3 of 22) B4A|SINE|B4 13528 NM_001081269 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Whsc1l1 6720429E03|A530023P05|AI528490|NSD3|WHISTLE Wolf-Hirschhorn syndrome candidate 1-like 1 (human) protein-coding common_peak1_72_484_0.0604780893111379_8.95207998173006_0.407199608265108 chr5 24586792 24587905 + 0.407199608265108 NA 5' UTR (NM_133913, exon 1 of 4) 5' UTR (NM_133913, exon 1 of 4) 598 NM_133913 100910 Mm.140672 NM_133913 ENSMUSG00000038181 Chpf2 2010209O12Rik|AW060945|mKIAA1402|mir-671 chondroitin polymerizing factor 2 protein-coding common_peak2_110_875_-0.0508688922364779_9.74935261348293_0.407148225181786 chr15 55071374 55072885 + 0.407148225181786 NA promoter-TSS (NM_001081288) promoter-TSS (NM_001081288) 23 NM_001081288 319944 Mm.380957 NM_001081288 ENSMUSG00000037343 Taf2 150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150 TATA-box binding protein associated factor 2 protein-coding common_peak2_603_6674_0.0171928858959856_12.7131485644103_0.40712216089135 chr7 139148834 139158473 + 0.40712216089135 NA intron (NM_001162540, intron 1 of 11) intron (NM_001162540, intron 1 of 11) 34841 NM_021302 57740 Mm.65336 NM_021302 ENSMUSG00000015981 Stk32c PKE|Pkek|YANK3 serine/threonine kinase 32C protein-coding common_peak1_52_323_0.0758917625584878_8.37779588416387_0.407000365572095 chr3 87838211 87839235 + 0.407000365572095 NA Intergenic MTE-int|LTR|ERVL-MaLR -8032 NM_001025571 27371 Mm.86361 NM_021309 ENSMUSG00000028071 Sh2d2a Lad|Ribp|Tsad SH2 domain containing 2A protein-coding common_peak1_107_790_0.0478983047395154_9.65148303684255_0.406908130745395 chr5 104046583 104047965 + 0.406908130745395 NA promoter-TSS (NR_049192) promoter-TSS (NR_049192) 410 NM_028794 74167 Mm.241484 NM_028794 ENSMUSG00000029310 Nudt9 1190002C07Rik|ADPR-PPase|AI462474 nudix (nucleoside diphosphate linked moiety X)-type motif 9 protein-coding common_peak2_232_2055_0.0304870116799698_11.0208680550339_0.406861947437873 chr13 43559251 43561582 + 0.406861947437873 NA promoter-TSS (NM_001081059) promoter-TSS (NM_001081059) -225 NM_001081059 76137 Mm.426290 NM_001081059 ENSMUSG00000021371 Mcur1 6230416A05Rik|AU015498|AV136929|AW554392|C88263|Ccdc90a mitochondrial calcium uniporter regulator 1 protein-coding common_peak1_228_2101_-0.0320790592040048_11.0215074243602_0.406811027984238 chr15 73089744 73091486 + 0.406811027984238 NA intron (NM_053068, intron 1 of 2) CpG 203 NM_053068 93696 Mm.23095 NM_053068 ENSMUSG00000068391 Chrac1 2410152E03Rik|2810406L04Rik|YCL1 chromatin accessibility complex 1 protein-coding common_peak1_130_1068_-0.0449588758736166_10.0395666997837_0.406717898756347 chr5 117357059 117358219 + 0.406717898756347 NA intron (NM_021539, intron 1 of 8) CpG 334 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding common_peak1_95_682_0.0512583221747178_9.44137092937745_0.406641575481386 chr4 123282343 123283634 + 0.406641575481386 NA promoter-TSS (NM_130881) promoter-TSS (NM_130881) 77 NM_130881 230721 Mm.277091 NM_130881 ENSMUSG00000011257 Pabpc4 - poly(A) binding protein, cytoplasmic 4 protein-coding common_peak2_95_682_0.0512583221747178_9.44137092937745_0.406641575481386 chr6 88897912 88899500 + 0.406641575481386 NA promoter-TSS (NM_008564) promoter-TSS (NM_008564) 74 NM_008564 17216 Mm.16711 NM_008564 ENSMUSG00000002870 Mcm2 AA959861|AW476101|BM28|CDCL1|Mcmd2|mKIAA0030 minichromosome maintenance complex component 2 protein-coding common_peak2_67_443_0.0623450169967779_8.82558837484849_0.406620393673056 chr8 125012409 125013721 + 0.406620393673056 NA promoter-TSS (NM_016909) promoter-TSS (NM_016909) 68 NM_016909 53424 Mm.5248 NM_016909 ENSMUSG00000056820 Tsnax R74833|Trax translin-associated factor X protein-coding common_peak1_57_362_0.0714498877031744_8.53955068184734_0.406546415311641 chr7 12478082 12479010 + 0.406546415311641 NA 5' UTR (NM_026112, exon 1 of 7) 5' UTR (NM_026112, exon 1 of 7) 241 NM_026112 67370 Mm.98929 NM_026112 ENSMUSG00000030386 Zfp606 2410022M24Rik|AW494727 zinc finger protein 606 protein-coding common_peak1_137_1138_-0.0443444002749604_10.1313798315706_0.40646105992747 chr18 80690253 80692525 + 0.40646105992747 NA intron (NM_198429, intron 2 of 9) (CA)n|Simple_repeat|Simple_repeat 16784 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_15_88_-0.17948016784123_6.38599334704578_0.406403951062135-4 chr5 64599970 64600452 + 0.406403951062135 NA intron (NR_045078, intron 3 of 3) intron (NR_045078, intron 3 of 3) 10488 NR_045078 100042198 Mm.25191 NR_045078 ENSMUSG00000105402 Gm3716 Gm1683 predicted gene 3716 ncRNA unique_peak2_15_88_-0.17948016784123_6.38599334704578_0.406403951062135-2 chr6 82871876 82872528 + 0.406403951062135 NA Intergenic Intergenic 9651 NR_040520 69652 Mm.96357 NR_040520 ENSMUSG00000100291 2310069B03Rik - RIKEN cDNA 2310069B03 gene ncRNA common_peak1_15_88_-0.17948016784123_6.38599334704578_0.406403951062135 chr1 172527307 172527754 + 0.406403951062135 NA intron (NM_027972, intron 1 of 11) intron (NM_027972, intron 1 of 11) 6400 NM_027972 71870 Mm.78373 NM_027972 ENSMUSG00000026546 Cfap45 1700028D05Rik|Ccdc19|Nesg1 cilia and flagella associated protein 45 protein-coding unique_peak2_15_88_-0.17948016784123_6.38599334704578_0.406403951062135 chr10 42031167 42031748 + 0.406403951062135 NA Intergenic Intergenic -13075 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak1_15_88_-0.17948016784123_6.38599334704578_0.406403951062135-3 chr12 13269159 13269522 + 0.406403951062135 NA intron (NM_027706, intron 1 of 51) intron (NM_027706, intron 1 of 51) 213 NM_027706 71169 Mm.177520 NM_027706 ENSMUSG00000020576 Nbas 4933425L03Rik|Nag neuroblastoma amplified sequence protein-coding common_peak1_15_88_-0.17948016784123_6.38599334704578_0.406403951062135-2 chr10 80264447 80264784 + 0.406403951062135 NA promoter-TSS (NM_133188) promoter-TSS (NM_133188) -376 NM_001122604 70248 Mm.148693 NM_133188 ENSMUSG00000069565 Dazap1 2410042M16Rik|mPrrp DAZ associated protein 1 protein-coding common_peak2_43_256_0.0807855046864283_8.04601730153709_0.406329625528723 chr8 111595057 111596495 + 0.406329625528723 NA intron (NM_001168623, intron 1 of 4) intron (NM_001168623, intron 1 of 4) 34546 NM_027570 52815 Mm.27589 NM_027570 ENSMUSG00000031958 Ldhd 4733401P21Rik|D8Bwg1320e lactate dehydrogenase D protein-coding common_peak1_162_1319_0.0375222296755542_10.3850833290836_0.40627731289902 chr6 117899793 117901604 + 0.40627731289902 NA intron (NM_001166432, intron 1 of 3) intron (NM_001166432, intron 1 of 3) 358 NM_001166432 98758 Mm.422979 NM_133834 ENSMUSG00000042079 Hnrnpf 4833420I20Rik|AA407306|Hnrpf heterogeneous nuclear ribonucleoprotein F protein-coding common_peak1_25_155_-0.129980974221317_7.22041173175159_0.405988582705267 chr12 21111291 21111667 + 0.405988582705267 NA promoter-TSS (NM_001004364) promoter-TSS (NM_001004364) -277 NM_001004364 211914 Mm.358946 NM_001004364 ENSMUSG00000052632 Asap2 6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_238_2212_-0.0306832217084327_11.0964461249468_0.405984773330246 chr9 15016402 15019477 + 0.405984773330246 NA intron (NM_019482, intron 2 of 4) intron (NM_019482, intron 2 of 4) 27539 NM_019482 55991 Mm.142253 NM_019482 ENSMUSG00000031934 Panx1 AI847747 pannexin 1 protein-coding common_peak2_148_1179_0.0403538578584168_10.2247480731784_0.405975925405571 chr11 77800431 77803302 + 0.405975925405571 NA intron (NM_001291214, intron 1 of 38) intron (NM_001291214, intron 1 of 38) 568 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding common_peak1_41_273_-0.0939451279756724_8.05105951897269_0.405932147424968 chr19 9898813 9899528 + 0.405932147424968 NA intron (NM_016692, intron 1 of 17) intron (NM_016692, intron 1 of 17) 363 NM_016692 16319 Mm.29755 NM_016692 ENSMUSG00000024660 Incenp 2700067E22Rik|AU019509|C130081E20|C77457 inner centromere protein protein-coding common_peak2_251_2265_0.0289016365039778_11.1603829640725_0.405833728615031 chr8 71610497 71614395 + 0.405833728615031 NA intron (NM_146211, intron 2 of 11) intron (NM_146211, intron 2 of 11) 1422 NM_146211 234407 Mm.240885 NM_146211 ENSMUSG00000034807 Colgalt1 2810024B22Rik|Glt25d1 collagen beta(1-O)galactosyltransferase 1 protein-coding common_peak2_60_426_-0.0735728085735179_8.70130585533373_0.405437764313015 chr11 100770303 100771542 + 0.405437764313015 NA promoter-TSS (NM_031871) promoter-TSS (NM_031871) 35 NM_031871 80860 Mm.37308 NM_031871 ENSMUSG00000017747 Ghdc D11Lgp1e GH3 domain containing protein-coding common_peak1_90_638_0.0526729217730519_9.34600858183352_0.405353884346091 chr11 51967196 51968345 + 0.405353884346091 NA exon (NM_029976, exon 1 of 3) exon (NM_029976, exon 1 of 3) 139 NM_029976 52626 Mm.289456 NM_029976 ENSMUSG00000020392 Cdkn2aipnl A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520 CDKN2A interacting protein N-terminal like protein-coding common_peak2_218_1903_0.0316357792309709_10.9106356529234_0.405346337767464 chr10 85184013 85186046 + 0.405346337767464 NA promoter-TSS (NM_007771) promoter-TSS (NM_007771) 25 NM_007771 12952 Mm.26237 NM_007771 ENSMUSG00000020038 Cry1 AU020726|AU021000|Phll1 cryptochrome 1 (photolyase-like) protein-coding common_peak1_27_144_0.106655660002991_7.23323692001643_0.405288483971646 chr1 161877329 161877800 + 0.405288483971646 NA promoter-TSS (NM_172645) promoter-TSS (NM_172645) -903 NM_172645 226551 Mm.170002 NM_172645 ENSMUSG00000040297 Suco 4732491B11|AI848100|AU016931|Opt SUN domain containing ossification factor protein-coding common_peak1_27_144_0.106655660002991_7.23323692001643_0.405288483971646-2 chr11 43358547 43359036 + 0.405288483971646 NA Intergenic Intergenic 15670 NR_029558 387164 NR_029558 ENSMUSG00000065601 Mir146 Mirn146|miR-146a|mmu-mir-146 microRNA 146 ncRNA unique_peak2_27_144_0.106655660002991_7.23323692001643_0.405288483971646 chr13 55536032 55537240 + 0.405288483971646 NA promoter-TSS (NM_134059) promoter-TSS (NM_134059) 22 NM_134059 72935 Mm.205045 NM_134059 ENSMUSG00000021494 Ddx41 2900024F02Rik|AA958953|ABS|AI324246 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 protein-coding common_peak2_37_242_-0.0978359890225349_7.87589450909451_0.405222878800437 chr1 74661498 74662546 + 0.405222878800437 NA intron (NM_001014974, intron 1 of 19) CpG 268 NM_001014974 67534 Mm.260714 NM_001014974 ENSMUSG00000033257 Ttll4 4632407P03Rik|AI451681|mKIAA0173 tubulin tyrosine ligase-like family, member 4 protein-coding common_peak2_371_3788_-0.0235600812484069_11.8758213838845_0.405039890639899 chr19 4117081 4122335 + 0.405039890639899 NA intron (NM_016666, intron 2 of 6) intron (NM_016666, intron 2 of 6) 1867 NM_001276284 11632 Mm.10433 NM_016666 ENSMUSG00000024847 Aip AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2 aryl-hydrocarbon receptor-interacting protein protein-coding common_peak1_29_183_-0.11490552345931_7.46610919432736_0.405013518123126 chr10 68221843 68222439 + 0.405013518123126 NA intron (NM_023598, intron 3 of 9) ORR1E|LTR|ERVL-MaLR 56585 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_29_183_-0.11490552345931_7.46610919432736_0.405013518123126-2 chr14 106211723 106212464 + 0.405013518123126 NA Intergenic Intergenic 105895 NR_073203 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak2_115_864_0.0453316143611939_9.77922212970469_0.404973719280948 chr1 36568978 36571790 + 0.404973719280948 NA intron (NM_027957, intron 3 of 5) intron (NM_027957, intron 3 of 5) -12003 NM_001126047 20353 Mm.29558 NM_001126047 ENSMUSG00000026121 Sema4c AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C protein-coding common_peak1_327_3139_0.024731354845505_11.6289145212017_0.404753138147224 chr2 156179028 156180278 + 0.404753138147224 NA promoter-TSS (NM_001291115) promoter-TSS (NM_001291115) -73 NM_001291115 170791 Mm.392436 NM_133242 ENSMUSG00000027620 Rbm39 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|R75070|Rnpc2|caper RNA binding motif protein 39 protein-coding common_peak1_79_543_0.0568960087531494_9.11591084562691_0.404618026906179 chr11 103116244 103117387 + 0.404618026906179 NA 5' UTR (NM_138753, exon 1 of 1) 5' UTR (NM_138753, exon 1 of 1) 490 NM_138753 192231 Mm.8763 NM_138753 ENSMUSG00000048878 Hexim1 7330426E13Rik|CLP-1|Clp1|HIS1 hexamethylene bis-acetamide inducible 1 protein-coding common_peak2_71_519_-0.064457828783075_8.99013889863692_0.40448223901759 chr3 95110433 95111899 + 0.40448223901759 NA exon (NM_009336, exon 1 of 6) exon (NM_009336, exon 1 of 6) 124 NM_009336 21427 Mm.133919 NM_009336 ENSMUSG00000008958 Vps72 Tcfl1|YL-1 vacuolar protein sorting 72 protein-coding common_peak1_20_100_0.119263161046703_6.71784306327515_0.404472558381799-3 chr15 81046661 81047082 + 0.404472558381799 NA intron (NM_001082536, intron 2 of 13) intron (NM_001082536, intron 2 of 13) 58176 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding common_peak2_20_100_0.119263161046703_6.71784306327515_0.404472558381799 chr13 36807266 36808111 + 0.404472558381799 NA Intergenic Intergenic -73211 NM_153529 68404 Mm.232930 NM_153529 ENSMUSG00000039114 Nrn1 0710008J23Rik|Cpg15|Nrn neuritin 1 protein-coding common_peak1_20_100_0.119263161046703_6.71784306327515_0.404472558381799-2 chr11 108247756 108248179 + 0.404472558381799 NA intron (NM_011101, intron 2 of 16) (GAAA)n|Simple_repeat|Simple_repeat 95921 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_20_100_0.119263161046703_6.71784306327515_0.404472558381799 chr10 118486516 118486998 + 0.404472558381799 NA Intergenic Intergenic 45711 NM_008337 15978 Mm.240327 NM_008337 ENSMUSG00000055170 Ifng IFN-g|Ifg interferon gamma protein-coding common_peak2_46_312_-0.0868877595066007_8.24657496717932_0.404429928331502 chr13 67754564 67755451 + 0.404429928331502 NA non-coding (NR_027969, exon 3 of 3) non-coding (NR_027969, exon 3 of 3) 127 NM_001001130 22746 Mm.288396 NM_001001130 ENSMUSG00000058331 Zfp85 KRAB19|Rslcan2|Zfp71|Zfp85-rs1 zinc finger protein 85 protein-coding common_peak1_46_312_-0.0868877595066007_8.24657496717932_0.404429928331502 chr11 119934021 119934733 + 0.404429928331502 NA Intergenic Intergenic -8715 NM_001037754 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding common_peak1_31_171_0.0966008196094261_7.47456516450681_0.404427432631973 chr9 96195623 96196314 + 0.404427432631973 NA promoter-TSS (NM_001184708) promoter-TSS (NM_001184708) -307 NM_178667 211586 Mm.17977 NM_178667 ENSMUSG00000032411 Tfdp2 1110029I05Rik|A330080J22Rik|DP-3|DP3 transcription factor Dp 2 protein-coding common_peak1_11_48_0.172453312790531_5.70093650051047_0.404412720632912-2 chr8 70753080 70753420 + 0.404412720632912 NA Intergenic Intergenic -1429 NM_009001 19339 Mm.5083 NM_009001 ENSMUSG00000031840 Rab3a - RAB3A, member RAS oncogene family protein-coding common_peak1_11_48_0.172453312790531_5.70093650051047_0.404412720632912 chr5 124023106 124023421 + 0.404412720632912 NA intron (NM_177876, intron 1 of 3) RSINE1|SINE|B4 8997 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_119_961_-0.0480120287996257_9.88588706937023_0.404328466574191 chr11 120624358 120625535 + 0.404328466574191 NA promoter-TSS (NM_153056) promoter-TSS (NM_153056) 56 NM_153056 209011 Mm.292957 NM_153056 ENSMUSG00000025138 Sirt7 - sirtuin 7 protein-coding common_peak1_88_670_-0.057150587435995_9.36159366248219_0.404243077204121 chr17 6007250 6008812 + 0.404243077204121 NA exon (NM_001113353, exon 8 of 27) exon (NM_001113353, exon 8 of 27) 451 NM_001290698 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding common_peak2_85_594_0.0555936232449987_9.24454266981781_0.404235429842443 chr10 111472709 111474022 + 0.404235429842443 NA intron (NM_015781, intron 1 of 15) CpG 173 NM_015781 53605 Mm.290407 NM_015781 ENSMUSG00000058799 Nap1l1 AA407126|AI256722|D10Ertd68e|NAP-1 nucleosome assembly protein 1-like 1 protein-coding common_peak1_220_1925_0.0311491882055464_10.9269665819462_0.404167271032442 chr11 115412069 115414356 + 0.404167271032442 NA Intergenic Intergenic 6707 NM_027862 71679 Mm.371641 NM_027862 ENSMUSG00000034566 Atp5h 0610009D10Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D protein-coding common_peak1_324_3213_-0.025134106463879_11.6375871604432_0.404134463275636 chr1 152901612 152904403 + 0.404134463275636 NA promoter-TSS (NM_001160256) promoter-TSS (NM_001160256) -361 NM_001005507 226517 Mm.270775 NM_001005507 ENSMUSG00000042772 Smg7 9430023P16Rik|mKIAA0250 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_94_725_-0.055355947720539_9.47614776413548_0.404119666982332 chr11 63975365 63976583 + 0.404119666982332 NA intron (NM_178379, intron 6 of 6) intron (NM_178379, intron 6 of 6) 11748 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak2_58_371_0.0663675939337942_8.57234260807493_0.404050101064451 chr19 5040804 5042203 + 0.404050101064451 NA promoter-TSS (NM_134155) promoter-TSS (NM_134155) 99 NM_134155 107392 Mm.29628 NM_134155 ENSMUSG00000080268 Brms1 AV003220|AW554636 breast cancer metastasis-suppressor 1 protein-coding common_peak2_126_1029_-0.0462179278965351_9.98531965812231_0.403983441165417-2 chr16 21793534 21795014 + 0.403983441165417 NA promoter-TSS (NR_037958) promoter-TSS (NR_037958) -73 NR_037958 100043489 Mm.326535 NR_037957 ENSMUSG00000097290 1300002E11Rik 1500026P21Rik RIKEN cDNA 1300002E11 gene ncRNA common_peak2_126_1029_-0.0462179278965351_9.98531965812231_0.403983441165417 chr14 44988184 44990683 + 0.403983441165417 NA exon (NM_008964, exon 1 of 2) exon (NM_008964, exon 1 of 2) 1322 NM_008964 19217 Mm.4630 NM_008964 ENSMUSG00000037759 Ptger2 EP2|Ptgerep2 prostaglandin E receptor 2 (subtype EP2) protein-coding common_peak1_169_1463_-0.0374456792451952_10.4969769986614_0.40393158794912 chr7 128460531 128461950 + 0.40393158794912 NA 5' UTR (NM_009383, exon 1 of 12) 5' UTR (NM_009383, exon 1 of 12) 273 NM_009383 21843 Mm.242072 NM_009383 ENSMUSG00000030846 Tial1 5330433G13Rik|AL033329|TIAR|mTIAR Tia1 cytotoxic granule-associated RNA binding protein-like 1 protein-coding common_peak1_66_476_-0.0673017558557873_8.86419457807762_0.403897939141311 chr11 85139030 85139912 + 0.403897939141311 NA intron (NM_001029934, intron 1 of 33) CpG 484 NM_001029934 237898 Mm.178524 NM_001029934 ENSMUSG00000000804 Usp32 2900074J03Rik|6430526O11Rik|AW045245 ubiquitin specific peptidase 32 protein-coding common_peak2_44_263_0.0817845182061774_8.08528637846154_0.403608907876043-2 chr4 3648331 3649972 + 0.403608907876043 NA Intergenic Intergenic -7355 NR_040643 70143 Mm.417835 NR_040643 ENSMUSG00000085394 2210414B05Rik - RIKEN cDNA 2210414B05 gene ncRNA common_peak2_44_263_0.0817845182061774_8.08528637846154_0.403608907876043 chr13 43784477 43786431 + 0.403608907876043 NA exon (NM_009856, exon 2 of 5) exon (NM_009856, exon 2 of 5) 342 NM_001289915 12522 Mm.57175 NM_009856 ENSMUSG00000015396 Cd83 - CD83 antigen protein-coding common_peak1_44_263_0.0817845182061774_8.08528637846154_0.403608907876043 chr10 127621291 127622012 + 0.403608907876043 NA promoter-TSS (NM_008512) promoter-TSS (NM_008512) -503 NM_008512 16971 Mm.271854 NM_008512 ENSMUSG00000040249 Lrp1 A2mr|AI316852|CD91|Lrp|b2b1554Clo low density lipoprotein receptor-related protein 1 protein-coding common_peak1_51_352_-0.0814908174438926_8.42277896454923_0.403601105688118 chr5 142919432 142920366 + 0.403601105688118 NA Intergenic B1_Mus2|SINE|Alu -13145 NM_007393 11461 Mm.328431 NM_007393 ENSMUSG00000029580 Actb Actx|E430023M04Rik|beta-actin actin, beta protein-coding common_peak1_162_1391_-0.0390990519273586_10.423393969885_0.403517572596567 chr1 74238570 74240977 + 0.403517572596567 NA intron (NM_029711, intron 1 of 9) MER3|DNA|hAT-Charlie 3223 NM_029711 76709 Mm.337038 NM_029711 ENSMUSG00000006304 Arpc2 2210023N03Rik|34kDa|p34-Arc actin related protein 2/3 complex, subunit 2 protein-coding common_peak2_56_392_-0.0738867827084331_8.58144211090439_0.403511322751708 chr4 152205986 152208474 + 0.403511322751708 NA intron (NM_001146057, intron 2 of 8) intron (NM_001146057, intron 2 of 8) 7386 NM_001146058 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak1_61_434_-0.0715770748154281_8.72908305332838_0.403467437508291 chr4 43559570 43560551 + 0.403467437508291 NA intron (NM_011602, intron 1 of 56) intron (NM_011602, intron 1 of 56) 2523 NM_011602 21894 Mm.208601 NM_011602 ENSMUSG00000028465 Tln1 Tln talin 1 protein-coding common_peak1_22_134_-0.138354792957321_7.00763820057217_0.403297873094561 chr12 54397601 54398224 + 0.403297873094561 NA Intergenic ORR1F|LTR|ERVL-MaLR -6594 NR_033689 665239 Mm.26856 NR_033689 Gm7550 EG665239|Gm666 predicted gene 7550 ncRNA common_peak1_22_134_-0.138354792957321_7.00763820057217_0.403297873094561-2 chr4 62738450 62739051 + 0.403297873094561 NA Intergenic Intergenic 64776 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak2_130_1005_0.0426726720413466_9.9957509258262_0.403277189586394 chr11 106416574 106418741 + 0.403277189586394 NA intron (NM_023913, intron 10 of 21) intron (NM_023913, intron 10 of 21) -35016 NM_010494 15896 Mm.394 NM_010494 ENSMUSG00000001029 Icam2 CD102|Icam-2|Ly-60 intercellular adhesion molecule 2 protein-coding common_peak1_42_280_-0.0886991499669758_8.09007674523744_0.403231670516741 chr11 96075052 96075625 + 0.403231670516741 NA intron (NM_007506, intron 1 of 4) intron (NM_007506, intron 1 of 4) 293 NM_001161419 11951 Mm.258 NM_007506 ENSMUSG00000006057 Atp5g1 - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) protein-coding common_peak2_134_1107_-0.0434290123312735_10.0920276598836_0.402939595144635 chr11 73047317 73048964 + 0.402939595144635 NA intron (NM_025818, intron 1 of 12) CpG 273 NM_025818 66874 Mm.41903 NM_025818 ENSMUSG00000020783 Ncbp3 1200014J11Rik|C130061O14Rik|C78393 nuclear cap binding subunit 3 protein-coding common_peak1_89_679_-0.0565999873867149_9.38109094244435_0.40284918760827 chr5 65955423 65956309 + 0.40284918760827 NA Intergenic Intergenic -11258 NM_001081104 231252 Mm.140015 NM_001081104 ENSMUSG00000029205 Chrna9 2410015I05Rik|Acra9|EG666827|Gm8311 cholinergic receptor, nicotinic, alpha polypeptide 9 protein-coding common_peak2_95_734_-0.0546003492589193_9.49430026509427_0.402832692999569 chr4 133727992 133731599 + 0.402832692999569 NA intron (NM_001080819, intron 1 of 19) intron (NM_001080819, intron 1 of 19) -12687 NR_106086 102465707 NR_106086 ENSMUSG00000104566 Mir7227 mmu-mir-7227 microRNA 7227 ncRNA common_peak1_114_912_-0.0479046590123922_9.81051872047803_0.402773045781608 chr15 36649030 36650490 + 0.402773045781608 NA Intergenic L1MD3|LINE|L1 -40787 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak1_17_82_0.129645930525743_6.4398623966098_0.402746000935386-5 chr3 95882305 95882728 + 0.402746000935386 NA promoter-TSS (NM_001033302) promoter-TSS (NM_001033302) -288 NM_001033302 229599 Mm.331218 NM_001033302 ENSMUSG00000038550 Ciart Chrono|Gm129 circadian associated repressor of transcription protein-coding unique_peak2_17_82_0.129645930525743_6.4398623966098_0.402746000935386 chr2 173276630 173277191 + 0.402746000935386 NA promoter-TSS (NM_022995) promoter-TSS (NM_022995) -377 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_17_82_0.129645930525743_6.4398623966098_0.402746000935386-2 chr15 52751223 52751612 + 0.402746000935386 NA Intergenic Intergenic 38972 NM_027212 69790 Mm.195562 NM_027212 ENSMUSG00000038622 Med30 1810038N03Rik|2510044J04Rik|TRAP25|Thrap6 mediator complex subunit 30 protein-coding common_peak1_17_82_0.129645930525743_6.4398623966098_0.402746000935386-4 chr2 73471383 73471859 + 0.402746000935386 NA intron (NM_153138, intron 1 of 7) intron (NM_153138, intron 1 of 7) 14132 NM_001289723 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak1_17_82_0.129645930525743_6.4398623966098_0.402746000935386 chr14 56259119 56259507 + 0.402746000935386 NA 3' UTR (NM_013542, exon 5 of 5) 3' UTR (NM_013542, exon 5 of 5) 2947 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding common_peak1_17_82_0.129645930525743_6.4398623966098_0.402746000935386-3 chr17 36205711 36206200 + 0.402746000935386 NA Intergenic CpG -15804 NM_008208 15043 Mm.426002 NM_008208 ENSMUSG00000054128 H2-T3 H-2T3|H2-Tw3|MumuTL|TL histocompatibility 2, T region locus 3 protein-coding common_peak1_17_82_0.129645930525743_6.4398623966098_0.402746000935386-6 chrX 73921236 73921622 + 0.402746000935386 NA TTS (NM_001164704) TTS (NM_001164704) 515 NM_001310538 56292 Mm.246654 NM_019870 ENSMUSG00000031388 Naa10 2310039H09Rik|Ard1|Ard1a|Te2 N(alpha)-acetyltransferase 10, NatA catalytic subunit protein-coding common_peak1_98_709_0.0497792494221194_9.4965648391031_0.402691676782693 chr13 113093701 113095295 + 0.402691676782693 NA intron (NM_010370, intron 4 of 4) intron (NM_010370, intron 4 of 4) 6483 NM_010370 14938 Mm.15510 NM_010370 ENSMUSG00000023132 Gzma AW494114|Ctla-3|Ctla3|Hf|Hf1|SE1|TSP-1|TSP1 granzyme A protein-coding common_peak1_92_656_0.0510671605652604_9.38528314060496_0.402544532173265 chr17 31854618 31855899 + 0.402544532173265 NA intron (NM_010831, intron 1 of 13) CpG-6228 534 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak2_49_301_0.0742227639976623_8.27551612132391_0.40242489701177-2 chr7 123377915 123378630 + 0.40242489701177 NA intron (NM_025304, intron 1 of 10) intron (NM_025304, intron 1 of 10) 290 NM_025304 30949 Mm.260527 NM_025304 ENSMUSG00000030763 Lcmt1 AL033290|LCMT-1|Lcmt leucine carboxyl methyltransferase 1 protein-coding common_peak2_49_301_0.0742227639976623_8.27551612132391_0.40242489701177 chr11 118243377 118245208 + 0.40242489701177 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 4300 NM_001112699 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_138_1082_0.0411672531842751_10.1014011542005_0.402289852103889 chr19 57360944 57362007 + 0.402289852103889 NA promoter-TSS (NR_040316) promoter-TSS (NR_040316) 466 NM_145505 226252 Mm.358870 NM_145505 ENSMUSG00000033478 Fam160b1 AI450540|mKIAA1600 family with sequence similarity 160, member B1 protein-coding common_peak2_131_1015_0.0418598832614254_10.0096146284029_0.402284904834826 chr4 135962711 135964559 + 0.402284904834826 NA Intergenic CpG -1530 NM_178389 74246 Mm.247946 NM_178389 ENSMUSG00000028671 Gale 2310002A12Rik|AI323962 galactose-4-epimerase, UDP protein-coding common_peak2_149_1257_-0.0401541874032638_10.2768391131777_0.402251799946614 chr16 17721492 17723721 + 0.402251799946614 NA intron (NM_001285886, intron 1 of 16) intron (NM_001285886, intron 1 of 16) 294 NM_001285886 94112 Mm.208970 NM_033609 ENSMUSG00000012114 Med15 A230074L19Rik|AW536074|Pcqap|mPcqap mediator complex subunit 15 protein-coding common_peak2_78_580_-0.0602952622912127_9.15224672225892_0.402066693926748 chr2 156143495 156145045 + 0.402066693926748 NA promoter-TSS (NM_025946) promoter-TSS (NM_025946) 37 NM_025946 67067 Mm.371623 NM_025946 ENSMUSG00000067847 Romo1 2010100O12Rik|AI853864 reactive oxygen species modulator 1 protein-coding common_peak2_142_1187_-0.0421287742183392_10.1932547336916_0.402047158295379 chr8 25016084 25018072 + 0.402047158295379 NA promoter-TSS (NM_007404) promoter-TSS (NM_007404) -133 NM_027194 69742 Mm.28626 NM_027194 ENSMUSG00000031556 Tm2d2 2410018G23Rik|Blp1 TM2 domain containing 2 protein-coding common_peak2_344_3343_0.02334177504423_11.719030019603_0.402035866048864 chr12 116280256 116284508 + 0.402035866048864 NA intron (NM_028731, intron 1 of 21) intron (NM_028731, intron 1 of 21) 1160 NM_028731 52635 Mm.273755 NM_028731 ENSMUSG00000021171 Esyt2 2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b extended synaptotagmin-like protein 2 protein-coding common_peak1_67_485_-0.0680516202588972_8.89078669347633_0.401946486844005 chr4 152195022 152196387 + 0.401946486844005 NA intron (NM_001146057, intron 1 of 8) ORR1A2|LTR|ERVL-MaLR -4140 NM_001146058 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak1_26_161_-0.117642436045029_7.28102878486211_0.40192359743021 chr12 113426651 113427143 + 0.40192359743021 NA Intergenic Intergenic -62668 NM_001009545 238405 Mm.442216 NM_001009545 ENSMUSG00000051804 Adam6b 4930523C11Rik a disintegrin and metallopeptidase domain 6B protein-coding common_peak1_26_161_-0.117642436045029_7.28102878486211_0.40192359743021-2 chr5 62763695 62764328 + 0.40192359743021 NA intron (NM_178407, intron 1 of 32) RSINE1|SINE|B4 2166 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_105_772_0.04802947270462_9.61833934027716_0.401799017047779 chr7 128048611 128049840 + 0.401799017047779 NA Intergenic Intergenic -13415 NM_001082960 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak1_14_65_0.137650002052895_6.1132191203849_0.401792444501623 chr10 95677713 95678112 + 0.401792444501623 NA Intergenic Tigger12|DNA|TcMar-Tigger -113745 NM_027722 71207 Mm.24397 NM_027722 ENSMUSG00000020029 Nudt4 4933436C10Rik|DIPP2|DIPP2alpha|DIPP2beta|HDCMB47P nudix (nucleoside diphosphate linked moiety X)-type motif 4 protein-coding common_peak1_172_1494_-0.0367192375929175_10.527570150289_0.40176952876125 chr18 37643405 37644930 + 0.40176952876125 NA promoter-TSS (NM_175770) promoter-TSS (NM_175770) 37 NM_175770 24074 Mm.236009 NM_175770 ENSMUSG00000051316 Taf7 55kDa|AI607308|BB007175|TAFII55|Taf2f TATA-box binding protein associated factor 7 protein-coding common_peak1_24_125_0.108735268636467_7.03164755781815_0.401729613028376-3 chr9 35267385 35267788 + 0.401729613028376 NA promoter-TSS (NM_028040) promoter-TSS (NM_028040) 219 NM_175411 109229 Mm.24197 NM_175411 ENSMUSG00000050471 Fam118b 2310022O21Rik|2700018L24Rik|C030004A17Rik|Ppp4r1l family with sequence similarity 118, member B protein-coding common_peak1_24_125_0.108735268636467_7.03164755781815_0.401729613028376-2 chr17 56667143 56667752 + 0.401729613028376 NA Intergenic RMER5|LTR|ERV1 -5778 NM_001252466 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding common_peak1_24_125_0.108735268636467_7.03164755781815_0.401729613028376 chr13 46360806 46361381 + 0.401729613028376 NA Intergenic Intergenic -57207 NM_001081425 666794 Mm.38269 NM_001081425 ENSMUSG00000038132 Rbm24 6330546B05Rik|AI606861 RNA binding motif protein 24 protein-coding common_peak1_153_1230_0.0377188054749649_10.2844744492219_0.401683558844346 chr10 40384890 40386970 + 0.401683558844346 NA intron (NM_001291816, intron 1 of 11) Lx9|LINE|L1 36622 NM_001291816 78334 Mm.200924 NM_198164 ENSMUSG00000038481 Cdk19 2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028 cyclin-dependent kinase 19 protein-coding unique_peak2_19_113_-0.141755786533965_6.76201212089776_0.401597068741964 chr4 62651469 62652525 + 0.401597068741964 NA intron (NM_019492, intron 18 of 19) intron (NM_019492, intron 18 of 19) -21977 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak2_19_113_-0.141755786533965_6.76201212089776_0.401597068741964-2 chr5 117509782 117510453 + 0.401597068741964 NA intron (NM_001312914, intron 3 of 19) intron (NM_001312914, intron 3 of 19) 96115 NM_001312914 333050 Mm.437947 NM_001034873 ENSMUSG00000061578 Ksr2 - kinase suppressor of ras 2 protein-coding common_peak2_62_442_-0.0695537286032355_8.7563860242534_0.401570105705192 chr5 118473502 118475252 + 0.401570105705192 NA Intergenic Intergenic -86342 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak2_204_1836_-0.0335870591676031_10.8263423815275_0.401562154657175 chr6 48553834 48556316 + 0.401562154657175 NA intron (NM_177736, intron 1 of 2) intron (NM_177736, intron 1 of 2) 276 NM_177736 243371 Mm.290764 NM_177736 ENSMUSG00000073096 Lrrc61 BC027309 leucine rich repeat containing 61 protein-coding common_peak2_196_1749_-0.034032590094391_10.7561229116725_0.401505222385372 chr2 24933420 24936027 + 0.401505222385372 NA intron (NM_001162485, intron 1 of 7) intron (NM_001162485, intron 1 of 7) 558 NR_027876 215705 Mm.45275 NM_178408 ENSMUSG00000026972 Arrdc1 AI957342|BC004091 arrestin domain containing 1 protein-coding common_peak1_208_1797_0.0315683110102949_10.8279614610196_0.401451523099035 chr11 78244952 78246586 + 0.401451523099035 NA promoter-TSS (NM_009297) promoter-TSS (NM_009297) 23 NM_009143 20316 Mm.20755 NM_009143 ENSMUSG00000002064 Sdf2 AI853825 stromal cell derived factor 2 protein-coding common_peak1_99_718_0.049391854069798_9.5145438874742_0.401439895377356 chr3 130729503 130730311 + 0.401439895377356 NA intron (NM_001199350, intron 1 of 4) CpG 422 NM_001199350 619547 Mm.391636 NM_001199350 Rpl34-ps1 EG619547|ENSMUSG00000068396|Gm10239 ribosomal protein L34, pseudogene 1 protein-coding common_peak1_34_219_-0.0999139990011262_7.7314027140241_0.401427628289101 chr7 4876966 4877623 + 0.401427628289101 NA intron (NM_001101598, intron 1 of 5) intron (NM_001101598, intron 1 of 5) 241 NM_001101598 664994 Mm.302624 NM_001101598 ENSMUSG00000086784 Isoc2a Isoc2 isochorismatase domain containing 2a protein-coding common_peak2_34_219_-0.0999139990011262_7.7314027140241_0.401427628289101 chr1 58504139 58505058 + 0.401427628289101 NA intron (NM_008765, intron 1 of 17) CpG 511 NM_001271526 18393 Mm.3411 NM_008765 ENSMUSG00000026037 Orc2 AU041563|Orc2l origin recognition complex, subunit 2 protein-coding common_peak2_57_400_-0.0721828007559946_8.61136702607692_0.40141141465754 chr1 53823227 53825000 + 0.40141141465754 NA intron (NM_001001883, intron 28 of 28) intron (NM_001001883, intron 28 of 28) -25311 NR_106149 102465783 NR_106149 ENSMUSG00000098443 Mir7681 Gm27806|mmu-mir-7681 microRNA 7681 ncRNA common_peak1_122_989_-0.0457069337482618_9.92843124809284_0.401358662397975 chr14 31000940 31002320 + 0.401358662397975 NA promoter-TSS (NM_026911) promoter-TSS (NM_026911) 36 NM_026911 69019 Mm.28852 NM_026911 ENSMUSG00000021917 Spcs1 1810004F21Rik signal peptidase complex subunit 1 homolog (S. cerevisiae) protein-coding common_peak1_184_1544_0.0344981152979944_10.6106401804407_0.401339764990751 chr10 29361001 29362637 + 0.401339764990751 NA intron (NM_001110198, intron 1 of 3) CpG 623 NM_026518 68031 Mm.28930 NM_026518 ENSMUSG00000038876 Rnf146 2610509H23Rik|Iduna ring finger protein 146 protein-coding common_peak2_93_665_0.0503650315411139_9.40456088284182_0.401195845503604 chr10 117951591 117953886 + 0.401195845503604 NA Intergenic Intergenic 27279 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak2_112_836_0.0464356856220576_9.73230165536137_0.401177722147948 chr15 97419535 97423452 + 0.401177722147948 NA Intergenic RLTR41|LTR|ERV1 -174206 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_73_536_-0.0623823155876462_9.03758712019159_0.401131858305669 chr11 11808997 11809953 + 0.401131858305669 NA promoter-TSS (NM_021891) promoter-TSS (NM_021891) -513 NM_001163360 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding common_peak1_136_1127_-0.0432137958639345_10.1179444544668_0.401104910887731 chr17 55877766 55879566 + 0.401104910887731 NA intron (NM_144546, intron 1 of 3) CpG 287 NM_144546 104349 Mm.460659 NM_144546 ENSMUSG00000057835 Zfp119a AL024077|Mzf13|Zfp119 zinc finger protein 119a protein-coding common_peak1_173_1505_-0.0370959128197192_10.5379580982621_0.401024024358961 chr7 111121819 111123436 + 0.401024024358961 NA promoter-TSS (NR_015573) promoter-TSS (NR_015573) 48 NR_015573 75479 Mm.381620 NR_015573 ENSMUSG00000110424 1700012D14Rik - RIKEN cDNA 1700012D14 gene ncRNA unique_peak2_36_206_0.086296693712085_7.73663530435537_0.400956107692655 chr17 78997812 78999103 + 0.400956107692655 NA intron (NM_029239, intron 2 of 18) intron (NM_029239, intron 2 of 18) 10048 NM_001171005 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding common_peak1_36_206_0.086296693712085_7.73663530435537_0.400956107692655 chr17 6640887 6641617 + 0.400956107692655 NA Intergenic Intergenic 14579 NM_001166630 100040563 Mm.457381 NM_001166630 ENSMUSG00000000579 Dynlt1c 100040603|Dynlt1d dynein light chain Tctex-type 1C protein-coding common_peak1_363_3688_-0.0234444086020602_11.8372918693938_0.400851117065723 chr18 23802579 23805940 + 0.400851117065723 NA intron (NM_153058, intron 1 of 6) CpG 289 NM_153058 212307 Mm.132237 NM_153058 ENSMUSG00000024277 Mapre2 AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1 microtubule-associated protein, RP/EB family, member 2 protein-coding common_peak2_116_931_-0.0471081788931347_9.84063205520771_0.400663628459737 chr1 160304895 160307832 + 0.400663628459737 NA intron (NM_001038621, intron 2 of 8) L1MC5a|LINE|L1 -10391 NR_035448 100316784 NR_035448 ENSMUSG00000089204 Mir1927 mmu-mir-1927 microRNA 1927 ncRNA common_peak1_28_151_0.100735801068983_7.29829541397808_0.400637698278337-2 chr5 54105180 54105753 + 0.400637698278337 NA intron (NM_001081103, intron 7 of 11) intron (NM_001081103, intron 7 of 11) 106943 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak2_28_151_0.100735801068983_7.29829541397808_0.400637698278337 chr14 25768041 25769091 + 0.400637698278337 NA intron (NM_001101433, intron 1 of 3) CpG 290 NM_001101433 71918 Mm.41904 NM_001101433 ENSMUSG00000055538 Zcchc24 2310047A01Rik zinc finger, CCHC domain containing 24 protein-coding common_peak1_28_151_0.100735801068983_7.29829541397808_0.400637698278337 chr2 32607069 32607800 + 0.400637698278337 NA intron (NM_001025310, intron 1 of 5) intron (NM_001025310, intron 1 of 5) 449 NR_110347 50935 Mm.88831 NM_016973 ENSMUSG00000026811 St6galnac6 ST6GalNAcVI|Siat7f ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 protein-coding unique_peak2_10_57_-0.224795563619976_5.74558321331758_0.400542309525508 chr15 85600181 85600674 + 0.400542309525508 NA Intergenic Intergenic -18606 NM_009528 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak1_32_178_0.0935041703966233_7.53056786246257_0.400502838278967-3 chr7 125553841 125554600 + 0.400502838278967 NA intron (NM_001008700, intron 1 of 10) intron (NM_001008700, intron 1 of 10) 1938 NM_001008700 16190 Mm.233802 NM_010557 ENSMUSG00000030748 Il4ra CD124|Il4r interleukin 4 receptor, alpha protein-coding common_peak1_32_178_0.0935041703966233_7.53056786246257_0.400502838278967-2 chr7 79277480 79278158 + 0.400502838278967 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 4553 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak1_32_178_0.0935041703966233_7.53056786246257_0.400502838278967 chr13 113226461 113227335 + 0.400502838278967 NA Intergenic MTEa|LTR|ERVL-MaLR 17239 NM_023612 71690 Mm.38929 NM_023612 ENSMUSG00000042379 Esm1 0610042H23Rik|AV004503|ESM-1 endothelial cell-specific molecule 1 protein-coding common_peak2_244_2188_0.0289255846080589_11.110519031485_0.40049408890477 chr6 120187000 120192592 + 0.40049408890477 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) 96416 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak1_43_288_-0.088515628620371_8.13066786819049_0.400310815981892 chr1 138167925 138168867 + 0.400310815981892 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 6730 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak2_43_288_-0.088515628620371_8.13066786819049_0.400310815981892 chr17 8371691 8372896 + 0.400310815981892 NA promoter-TSS (NM_001161832) promoter-TSS (NM_001161832) -103 NM_001161832 21331 Mm.482744 NM_013682 T2 brachyury2 brachyury 2 protein-coding common_peak2_85_642_-0.0563354458876422_9.30050720438413_0.400303309242598 chr5 62750823 62754218 + 0.400303309242598 NA intron (NM_178407, intron 1 of 32) MLT1A|LTR|ERVL-MaLR 13657 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak1_137_1137_-0.043077210873431_10.1307462368699_0.400212121037028 chr1 185328571 185329915 + 0.400212121037028 NA exon (NM_198653, exon 1 of 23) exon (NM_198653, exon 1 of 23) 158 NM_198653 381314 Mm.275841 NM_198653 ENSMUSG00000026618 Iars2 2010002H18Rik|C79125 isoleucine-tRNA synthetase 2, mitochondrial protein-coding common_peak1_155_1250_0.0373019978147529_10.3075170730732_0.400094614053664 chr2 170218433 170220297 + 0.400094614053664 NA Intergenic Intergenic -76690 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_268_2553_-0.0281836881337156_11.3044509656359_0.399945526090101 chr1 95663460 95667742 + 0.399945526090101 NA intron (NM_001159745, intron 1 of 3) intron (NM_001159745, intron 1 of 3) 1993 NM_009183 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak1_60_387_0.0646066088598456_8.63221614661705_0.399892109000752 chr19 9104090 9105090 + 0.399892109000752 NA Intergenic Intergenic -16634 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak2_94_674_0.0497260983370182_9.4236067411067_0.399882527282087 chr9 41116735 41119361 + 0.399882527282087 NA intron (NM_176860, intron 1 of 13) intron (NM_176860, intron 1 of 13) 39446 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak1_50_309_0.0715463718532181_8.31189759120085_0.399869446309744 chr5 143817782 143818488 + 0.399869446309744 NA Intergenic CpG -53727 NM_013557 15467 Mm.389709 NM_013557 ENSMUSG00000029613 Eif2ak1 HCR|Hri eukaryotic translation initiation factor 2 alpha kinase 1 protein-coding common_peak2_50_309_0.0715463718532181_8.31189759120085_0.399869446309744 chr15 100422364 100423662 + 0.399869446309744 NA promoter-TSS (NM_001146161) promoter-TSS (NM_001146161) 42 NM_001146161 18174 Mm.234608 NM_008732 ENSMUSG00000023030 Slc11a2 DCT1|DMT1|Nramp2|mk|van solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 protein-coding unique_peak2_55_347_0.0702335653555526_8.47806027852651_0.399854718023492 chr8 120497511 120499599 + 0.399854718023492 NA intron (NM_198671, intron 1 of 15) MLT1G1|LTR|ERVL-MaLR 9689 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_88_621_0.0522475986335849_9.3068945694474_0.399832763097126 chr12 69724136 69725935 + 0.399832763097126 NA promoter-TSS (NM_026536) promoter-TSS (NM_026536) 73 NM_026536 68055 Mm.27844 NM_026536 ENSMUSG00000054894 Atp5s 1110015E18Rik|ATPW ATP synthase, H+ transporting, mitochondrial F0 complex, subunit S protein-coding common_peak1_152_1288_-0.0402312550809114_10.3119209208212_0.3997828263713 chr4 101181900 101183700 + 0.3997828263713 NA intron (NM_146145, intron 5 of 24) (A)n|Simple_repeat|Simple_repeat 82482 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_63_450_-0.0675057377575001_8.78323075437663_0.399741785945974 chr4 133545084 133546070 + 0.399741785945974 NA intron (NM_010948, intron 1 of 7) intron (NM_010948, intron 1 of 7) 450 NM_010948 18221 Mm.69 NM_010948 ENSMUSG00000028851 Nudc SIG-92|Silg92 nudC nuclear distribution protein protein-coding common_peak2_63_450_-0.0675057377575001_8.78323075437663_0.399741785945974 chr14 22019562 22020979 + 0.399741785945974 NA intron (NM_028275, intron 1 of 6) ORSL|DNA|hAT-Tip100 558 NM_028275 76633 Mm.489898 NM_028275 ENSMUSG00000063458 1700112E06Rik 2700009F18Rik RIKEN cDNA 1700112E06 gene protein-coding common_peak2_120_911_0.0436768304707069_9.85472842940009_0.399694664185994 chr14 115040194 115042394 + 0.399694664185994 NA Intergenic CpG -2377 NR_029785 723905 NR_029785 ENSMUSG00000065508 Mir17 Mirn17|mir-17|mmu-mir-17 microRNA 17 ncRNA common_peak2_499_5428_-0.0191253671418679_12.3969080849583_0.399679073173446 chr9 63753689 63760183 + 0.399679073173446 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 1058 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_191_1695_-0.034308052912035_10.7107664281072_0.39959412876082 chr10 59950102 59952930 + 0.39959412876082 NA 5' UTR (NM_029083, exon 2 of 3) 5' UTR (NM_029083, exon 2 of 3) 254 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak1_145_1217_-0.0413670803343464_10.2296148777392_0.399522620039763 chr13 12460069 12461745 + 0.399522620039763 NA intron (NM_001291057, intron 1 of 8) intron (NM_001291057, intron 1 of 8) 831 NM_001291060 56048 Mm.474138 NM_018886 ENSMUSG00000057554 Lgals8 1200015E08Rik|AI326142|D13Ertd524e|Lgals-8 lectin, galactose binding, soluble 8 protein-coding common_peak2_134_1044_0.0410259267496702_10.0498001903431_0.39951321551937 chr15 102072911 102074896 + 0.39951321551937 NA 5' UTR (NM_145625, exon 1 of 15) 5' UTR (NM_145625, exon 1 of 15) 130 NM_145625 75705 Mm.290022 NM_145625 ENSMUSG00000058655 Eif4b 2310046H11Rik|AL024095|C85189|Eif4a2 eukaryotic translation initiation factor 4B protein-coding common_peak1_71_476_0.0600645282398684_8.92787772012544_0.39945689103217 chr17 26571603 26572377 + 0.39945689103217 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 10478 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak1_107_791_0.0460755691326966_9.65239440464596_0.399418913475835 chr6 54939394 54941140 + 0.399418913475835 NA intron (NM_172729, intron 4 of 11) intron (NM_172729, intron 4 of 11) 31394 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak1_317_3128_-0.02499735045817_11.5989872680118_0.399365320786731 chr1 39900164 39903437 + 0.399365320786731 NA intron (NM_001252200, intron 2 of 31) intron (NM_001252200, intron 2 of 31) 887 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding unique_peak2_16_94_-0.166319347356776_6.48669593465256_0.39933359820233 chr16 97203501 97204261 + 0.39933359820233 NA Intergenic Intergenic -33146 NM_031174 13508 Mm.102437 NM_031174 ENSMUSG00000050272 Dscam 4932410A21Rik Down syndrome cell adhesion molecule protein-coding common_peak1_16_94_-0.166319347356776_6.48669593465256_0.39933359820233 chr14 55091509 55091854 + 0.39933359820233 NA intron (NM_001039198, intron 1 of 9) intron (NM_001039198, intron 1 of 9) 367 NM_001039198 239102 Mm.441113 NM_001039198 ENSMUSG00000040721 Zfhx2 ZFH-5 zinc finger homeobox 2 protein-coding common_peak2_16_94_-0.166319347356776_6.48669593465256_0.39933359820233 chr13 21408169 21408874 + 0.39933359820233 NA Intergenic Intergenic -5766 NM_023685 72739 Mm.296071 NM_023685 ENSMUSG00000021327 Zkscan3 2810435N07Rik|AA408594|AI132359|Skz1|Zf47|Zfp-47|Zfp306|Zfp307|mszf35 zinc finger with KRAB and SCAN domains 3 protein-coding common_peak1_16_94_-0.166319347356776_6.48669593465256_0.39933359820233-2 chr15 76070451 76070873 + 0.39933359820233 NA promoter-TSS (NM_134089) promoter-TSS (NM_134089) -878 NM_001310542 105782 Mm.25568 NM_134089 ENSMUSG00000022568 Scrib AI118201|CRIB|Crc|SCRIB1|Scrb1|mKIAA0147|vartul scribbled planar cell polarity protein-coding common_peak1_156_1260_0.0371230740774298_10.3189140973669_0.399318807521097 chr4 109675962 109677439 + 0.399318807521097 NA promoter-TSS (NM_007983) promoter-TSS (NM_007983) 73 NM_007983 14084 Mm.318259 NM_007983 ENSMUSG00000010517 Faf1 AA408698|Dffrx|Fam Fas-associated factor 1 protein-coding common_peak2_53_367_-0.0747420780310613_8.48619091704148_0.39930250792058 chr13 68581459 68582989 + 0.39930250792058 NA promoter-TSS (NM_172480) promoter-TSS (NM_172480) -24 NM_027123 69577 Mm.23670 NM_027123 ENSMUSG00000021532 Fastkd3 2310010B21Rik|AW048587 FAST kinase domains 3 protein-coding common_peak1_53_367_-0.0747420780310613_8.48619091704148_0.39930250792058 chr16 57471285 57472174 + 0.39930250792058 NA intron (NM_001040397, intron 1 of 4) L2a|LINE|L2 -77513 NM_001177871 78749 Mm.328360 NM_001040397 ENSMUSG00000043336 Filip1l 4631422O05Rik|Doc1 filamin A interacting protein 1-like protein-coding common_peak1_98_761_-0.0521927236791573_9.54755082565374_0.399157619719446 chr11 33162401 33163815 + 0.399157619719446 NA promoter-TSS (NM_008722) promoter-TSS (NM_008722) 98 NM_001252261 18148 Mm.485384 NM_008722 ENSMUSG00000057113 Npm1 B23|NO38|Npm nucleophosmin 1 protein-coding common_peak1_80_598_-0.0600701097959071_9.19637713789083_0.39896541960515 chr13 60936200 60937486 + 0.39896541960515 NA promoter-TSS (NM_007796) promoter-TSS (NM_007796) -218 NM_007796 13024 Mm.482089 NM_007796 ENSMUSG00000044258 Ctla2a Ctla-2a cytotoxic T lymphocyte-associated protein 2 alpha protein-coding common_peak2_41_242_0.0792744513790735_7.96444972929532_0.398956829326038-2 chr8 106415168 106416075 + 0.398956829326038 NA 5' UTR (NM_011764, exon 1 of 4) 5' UTR (NM_011764, exon 1 of 4) 282 NM_011764 22751 Mm.295582 NM_011764 ENSMUSG00000031907 Zfp90 6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954 zinc finger protein 90 protein-coding common_peak2_41_242_0.0792744513790735_7.96444972929532_0.398956829326038 chr5 112219505 112220959 + 0.398956829326038 NA non-coding (NR_033657, exon 7 of 7) non-coding (NR_033657, exon 7 of 7) 8716 NR_033657 330166 Mm.44854 NR_003718 ENSMUSG00000097767 Miat 3632434I06|A230057G18Rik|Rncr2|gomafu myocardial infarction associated transcript (non-protein coding) ncRNA unique_peak2_13_75_-0.187975074612015_6.15393997613758_0.398951012888126-4 chr17 9970792 9971509 + 0.398951012888126 NA Intergenic Intergenic -195284 NR_045433 71092 Mm.243827 NR_045433 4930452A19Rik 4933424P20Rik RIKEN cDNA 4930452A19 gene ncRNA unique_peak2_13_75_-0.187975074612015_6.15393997613758_0.398951012888126 chr10 107931928 107932552 + 0.398951012888126 NA Intergenic Intergenic -14405 NR_131147 628877 Mm.363120 NR_131147 Gm29685 - predicted gene, 29685 ncRNA unique_peak2_13_75_-0.187975074612015_6.15393997613758_0.398951012888126-2 chr13 6515002 6515710 + 0.398951012888126 NA Intergenic Intergenic -32801 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 protein-coding unique_peak2_13_75_-0.187975074612015_6.15393997613758_0.398951012888126-5 chr5 65881599 65882362 + 0.398951012888126 NA intron (NM_001081105, intron 1 of 2) intron (NM_001081105, intron 1 of 2) 18411 NM_001081105 74734 Mm.20323 NM_001081105 ENSMUSG00000029204 Rhoh 5830400A04Rik|AU019774|Arhh ras homolog family member H protein-coding unique_peak2_13_75_-0.187975074612015_6.15393997613758_0.398951012888126-3 chr13 62760126 62760817 + 0.398951012888126 NA promoter-TSS (NR_030493) promoter-TSS (NR_030493) -268 NR_030493 751548 NR_030493 ENSMUSG00000096098 Mir713 Mirn713|mir-713|mmu-mir-713 microRNA 713 ncRNA common_peak1_92_706_-0.0547496839218091_9.43819156284849_0.398884628140393 chr5 146793853 146795096 + 0.398884628140393 NA intron (NM_011669, intron 1 of 8) intron (NM_011669, intron 1 of 8) 482 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak1_21_106_0.118330756292805_6.80063236454755_0.398877173414238-3 chr7 25395299 25395698 + 0.398877173414238 NA non-coding (NR_015569, exon 1 of 7) non-coding (NR_015569, exon 1 of 7) 489 NM_010719 16890 Mm.158548 NM_010719 ENSMUSG00000003123 Lipe 4933403G17Rik|HSL lipase, hormone sensitive protein-coding common_peak1_21_106_0.118330756292805_6.80063236454755_0.398877173414238-2 chr2 27487932 27488459 + 0.398877173414238 NA Intergenic B2_Mm1t|SINE|B2 -12522 NM_001113574 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding common_peak2_21_106_0.118330756292805_6.80063236454755_0.398877173414238 chr7 101213933 101214666 + 0.398877173414238 NA intron (NM_199012, intron 8 of 20) intron (NM_199012, intron 8 of 20) 87789 NM_001111111 73683 Mm.275744 NM_001111111 ENSMUSG00000047767 Atg16l2 2410118P20Rik autophagy related 16-like 2 (S. cerevisiae) protein-coding common_peak1_21_106_0.118330756292805_6.80063236454755_0.398877173414238 chr10 95021492 95021983 + 0.398877173414238 NA Intergenic ORR1B1|LTR|ERVL-MaLR -77159 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding common_peak1_23_140_-0.125775884306699_7.07666341024544_0.39873313218364-2 chr13 33079225 33079683 + 0.39873313218364 NA Intergenic Intergenic -4649 NM_173052 282663 Mm.314490 NM_173052 ENSMUSG00000051029 Serpinb1b 6330533H24Rik|EIB|Serpin1b1|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1b protein-coding common_peak1_23_140_-0.125775884306699_7.07666341024544_0.39873313218364-3 chr18 11930857 11931519 + 0.39873313218364 NA intron (NM_022021, intron 6 of 8) L1ME2|LINE|L1 -90750 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA common_peak1_23_140_-0.125775884306699_7.07666341024544_0.39873313218364 chr10 82889677 82890333 + 0.39873313218364 NA intron (NM_001042514, intron 12 of 13) intron (NM_001042514, intron 12 of 13) 23379 NM_025499 66341 Mm.443284 NM_025499 ENSMUSG00000109864 Eid3 1700027M21Rik|NS4EB EP300 interacting inhibitor of differentiation 3 protein-coding common_peak1_118_950_-0.0462291606209195_9.8701869505501_0.398639906158058 chr1 182408568 182409625 + 0.398639906158058 NA promoter-TSS (NM_173378) promoter-TSS (NM_173378) -71 NM_173378 209456 Mm.287450 NM_173378 ENSMUSG00000026510 Trp53bp2 53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550 transformation related protein 53 binding protein 2 protein-coding common_peak2_290_2808_-0.0263680296097046_11.4426568943215_0.398564204045713 chr1 93823585 93826403 + 0.398564204045713 NA promoter-TSS (NM_001310767) promoter-TSS (NM_001310767) -246 NM_178882 98314 Mm.383401 NM_178882 ENSMUSG00000073609 D2hgdh AA408776|AA408778|AI325464 D-2-hydroxyglutarate dehydrogenase protein-coding common_peak2_128_987_0.0414944548225549_9.96911445899596_0.398554854447785 chr1 192061736 192064673 + 0.398554854447785 NA intron (NM_011633, intron 3 of 9) intron (NM_011633, intron 3 of 9) 29395 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding common_peak2_407_4114_0.020830995377537_12.0170922129978_0.398510050788591 chr11 34046219 34051832 + 0.398510050788591 NA intron (NM_010696, intron 1 of 20) intron (NM_010696, intron 1 of 20) 1824 NM_010696 16822 Mm.265350 NM_010696 ENSMUSG00000002699 Lcp2 AI323664|BB161688|SLP-76|SLP76|m1Khoe|twm lymphocyte cytosolic protein 2 protein-coding common_peak2_83_578_0.053279728181975_9.20405940208022_0.398466957099622-2 chr1 128547932 128550270 + 0.398466957099622 NA Intergenic Intergenic 43198 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak2_83_578_0.053279728181975_9.20405940208022_0.398466957099622 chr1 51593217 51594971 + 0.398466957099622 NA Intergenic Intergenic -115695 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding common_peak2_105_826_-0.0493894425418073_9.66704879790037_0.398450071446796 chr2 167014523 167016110 + 0.398450071446796 NA promoter-TSS (NM_153065) promoter-TSS (NM_153065) 3 NM_153065 228889 Mm.295031 NM_153065 ENSMUSG00000017999 Ddx27 C86129 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 protein-coding common_peak2_205_1765_0.0318905673146315_10.8022149113058_0.398352924352422 chr6 7843668 7846362 + 0.398352924352422 NA promoter-TSS (NM_052993) promoter-TSS (NM_052993) -209 NM_052993 94192 Mm.102752 NM_052993 ENSMUSG00000042460 C1galt1 2210410E06Rik|AV284120|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 protein-coding common_peak1_35_226_-0.0952508142318917_7.77892308017497_0.398217459899945 chr1 127624974 127625752 + 0.398217459899945 NA intron (NM_028135, intron 2 of 7) intron (NM_028135, intron 2 of 7) 52658 NM_028135 72160 Mm.281287 NM_028135 ENSMUSG00000026347 Tmem163 2610024A01Rik|SV31 transmembrane protein 163 protein-coding common_peak1_267_2446_0.0269699364430469_11.2702833543009_0.398151982941988 chr7 49093948 49096192 + 0.398151982941988 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 135997 NM_001111016 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_44_295_-0.0832747280643176_8.16781600159679_0.397888697244221 chr19 29064022 29064946 + 0.397888697244221 NA Intergenic Intergenic -2817 NR_045687 100503337 Mm.103412 NR_045687 Gm9895 ENSMUSG00000052976 predicted gene 9895 ncRNA common_peak2_46_279_0.0738480704810502_8.16620705218549_0.397888697244122 chr2 27693013 27694562 + 0.397888697244122 NA intron (NM_011305, intron 1 of 9) intron (NM_011305, intron 1 of 9) -15505 NM_001290481 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_158_1280_0.0368215212547511_10.341465520969_0.39780308685506 chr10 122738169 122740240 + 0.39780308685506 NA intron (NM_176919, intron 1 of 8) intron (NM_176919, intron 1 of 8) 59889 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak2_211_1911_-0.0319004201649236_10.8849165978983_0.397573678813409 chr9 92382543 92386401 + 0.397573678813409 NA Intergenic Tigger1|DNA|TcMar-Tigger -72906 NM_178711 235527 Mm.55289 NM_178711 ENSMUSG00000032377 Plscr4 AV245873 phospholipid scramblase 4 protein-coding common_peak1_27_168_-0.114314686264259_7.34372209315005_0.397561957092557-2 chr5 37053650 37054273 + 0.397561957092557 NA intron (NM_178394, intron 1 of 12) Lx8|LINE|L1 3104 NM_178394 76071 Mm.85280 NM_178394 ENSMUSG00000063646 Jakmip1 5830437M04Rik|C330021K24Rik|Gababrbp|Marlin-1 janus kinase and microtubule interacting protein 1 protein-coding common_peak1_27_168_-0.114314686264259_7.34372209315005_0.397561957092557 chr10 77609808 77610397 + 0.397561957092557 NA intron (NM_001301671, intron 2 of 3) intron (NM_001301671, intron 2 of 3) 3504 NM_001301671 20610 Mm.24433 NM_019929 ENSMUSG00000020265 Sumo3 2810014B19Rik|D10Ertd345e|SMT3A|SUMO-3|Smt3h1 small ubiquitin-like modifier 3 protein-coding common_peak2_27_168_-0.114314686264259_7.34372209315005_0.397561957092557 chr16 18625897 18626689 + 0.397561957092557 NA intron (NM_213614, intron 2 of 11) CpG 3645 NM_213614 18951 Mm.20365 NM_213614 ENSMUSG00000072214 Sept5 Cdcrel-1|Cdcrel1|Pnutl1 septin 5 protein-coding common_peak2_87_660_-0.0554840964410293_9.34076441328718_0.397545397400066 chr5 124035996 124037553 + 0.397545397400066 NA Intergenic (TCCC)n|Simple_repeat|Simple_repeat -4514 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak2_155_1318_-0.0390607772709703_10.3456984606161_0.397505535408554 chr7 127470267 127472427 + 0.397505535408554 NA promoter-TSS (NM_145589) promoter-TSS (NM_145589) -267 NM_145589 233895 Mm.44183 NM_145589 ENSMUSG00000030822 Prr14 BC006909 proline rich 14 protein-coding common_peak2_126_1028_-0.0448165727199239_9.98461898053401_0.397495770248624 chr4 156025299 156027388 + 0.397495770248624 NA promoter-TSS (NM_009400) promoter-TSS (NM_009400) 1 NM_021985 21936 Mm.3180 NM_009400 ENSMUSG00000041954 Tnfrsf18 AITR|Gitr tumor necrosis factor receptor superfamily, member 18 protein-coding common_peak1_126_1028_-0.0448165727199239_9.98461898053401_0.397495770248624 chr17 29500376 29501995 + 0.397495770248624 NA Intergenic Intergenic 10140 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak1_51_317_0.0691506005429332_8.34745825555582_0.397439653112529-2 chr9 44326398 44327450 + 0.397439653112529 NA promoter-TSS (NM_007875) promoter-TSS (NM_007875) 79 NM_007875 13478 Mm.18353 NM_007875 ENSMUSG00000032123 Dpagt1 AU021132|Dpagt2|GPT|Gnpta dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) protein-coding common_peak1_51_317_0.0691506005429332_8.34745825555582_0.397439653112529 chr12 25141336 25142002 + 0.397439653112529 NA Intergenic Intergenic 12495 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_31_197_-0.106491045768085_7.57611109719557_0.397368598818444-2 chr2 44927343 44927856 + 0.397368598818444 NA Intergenic CpG -65977 NM_172662 227835 Mm.314312 NM_172662 ENSMUSG00000036890 Gtdc1 E330008O22Rik glycosyltransferase-like domain containing 1 protein-coding common_peak1_31_197_-0.106491045768085_7.57611109719557_0.397368598818444 chr1 55085818 55086567 + 0.397368598818444 NA intron (NM_010477, intron 2 of 11) B2_Mm1t|SINE|B2 1740 NM_010477 15510 Mm.1777 NM_010477 ENSMUSG00000025980 Hspd1 60kDa|Hsp60 heat shock protein 1 (chaperonin) protein-coding common_peak1_31_197_-0.106491045768085_7.57611109719557_0.397368598818444-3 chr9 35121242 35121834 + 0.397368598818444 NA intron (NR_029475, intron 2 of 5) intron (NR_029475, intron 2 of 5) -4728 NM_009178 20443 Mm.275973 NM_009178 ENSMUSG00000032038 St3gal4 Siat4c ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding common_peak2_31_197_-0.106491045768085_7.57611109719557_0.397368598818444 chr2 26380000 26380835 + 0.397368598818444 NA intron (NM_172339, intron 1 of 22) CpG 236 NM_172339 227644 Mm.207460 NM_172339 ENSMUSG00000036281 Snapc4 5730436L13Rik small nuclear RNA activating complex, polypeptide 4 protein-coding common_peak1_151_1211_0.037027153483006_10.2616875602145_0.397356051531596 chr4 32279801 32282281 + 0.397356051531596 NA Intergenic Intergenic -136394 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_109_809_0.0461252318002838_9.68484071367213_0.397265525800294 chr15 99771278 99772961 + 0.397265525800294 NA intron (NM_028015, intron 1 of 9) CpG 396 NM_028015 71949 Mm.390821 NM_028015 ENSMUSG00000023021 Cers5 2310081H14Rik|AU045339|AW544927|Lass5|Trh4 ceramide synthase 5 protein-coding common_peak1_116_874_0.0439387590414544_9.79510858624042_0.396891758167821 chrX 101640038 101641129 + 0.396891758167821 NA intron (NM_001290535, intron 1 of 21) intron (NM_001290535, intron 1 of 21) 365 NM_001290535 108155 Mm.487332 NM_139144 ENSMUSG00000034160 Ogt 1110038P24Rik|4831420N21Rik|AI115525|Ogtl O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) protein-coding common_peak1_33_185_0.0909897610524961_7.58465369163428_0.396865331326868-2 chr7 102337687 102338333 + 0.396865331326868 NA intron (NM_009287, intron 1 of 11) intron (NM_009287, intron 1 of 11) 70186 NM_009287 20866 Mm.645 NM_009287 ENSMUSG00000030987 Stim1 SIM stromal interaction molecule 1 protein-coding common_peak1_33_185_0.0909897610524961_7.58465369163428_0.396865331326868 chr7 19876841 19877545 + 0.396865331326868 NA 3' UTR (NM_177036, exon 7 of 7) 3' UTR (NM_177036, exon 7 of 7) 10772 NM_177036 319930 Mm.215839 NM_177036 ENSMUSG00000049848 Ceacam19 C130022P09Rik|CEAL1 carcinoembryonic antigen-related cell adhesion molecule 19 protein-coding common_peak1_130_1006_0.0412392938400892_9.99646761492683_0.396739862367166 chr3 103057827 103059050 + 0.396739862367166 NA TTS (NM_001310693) TTS (NM_001310693) 153 NM_010937 18176 Mm.400954 NM_010937 ENSMUSG00000027852 Nras AV095280|N-ras neuroblastoma ras oncogene protein-coding common_peak1_130_1006_0.0412392938400892_9.99646761492683_0.396739862367166-2 chr8 25784657 25786108 + 0.396739862367166 NA promoter-TSS (NM_026121) promoter-TSS (NM_026121) -173 NM_026121 67384 Mm.118400 NM_026121 ENSMUSG00000037316 Bag4 2410112I15Rik|SODD BCL2-associated athanogene 4 protein-coding common_peak2_67_444_0.0590993574931229_8.82721120460032_0.396697309769084 chr8 94408029 94409731 + 0.396697309769084 NA Intergenic Intergenic 22380 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak2_123_940_0.0418559143784822_9.89897886991778_0.396696760602656 chr3 130708507 130710010 + 0.396696760602656 NA exon (NM_025509, exon 1 of 4) exon (NM_025509, exon 1 of 4) 186 NM_025509 66357 Mm.300697 NM_025509 ENSMUSG00000041084 Ostc 2310008M10Rik|5730557H03Rik oligosaccharyltransferase complex subunit (non-catalytic) protein-coding common_peak1_25_132_0.100138809139742_7.10535184007106_0.396600276612485 chr1 9545532 9546042 + 0.396600276612485 NA exon (NM_021511, exon 1 of 1) exon (NM_021511, exon 1 of 1) 379 NM_021511 59014 Mm.29061 NM_021511 ENSMUSG00000061024 Rrs1 5730466A07Rik|AA415037|D1Ertd701e|Rrr ribosome biogenesis regulator 1 protein-coding common_peak1_25_132_0.100138809139742_7.10535184007106_0.396600276612485-2 chr11 33700074 33700699 + 0.396600276612485 NA intron (NM_001190885, intron 1 of 8) intron (NM_001190885, intron 1 of 8) -121429 NM_146017 216643 Mm.99989 NM_146017 ENSMUSG00000020159 Gabrp - gamma-aminobutyric acid (GABA) A receptor, pi protein-coding unique_peak2_25_132_0.100138809139742_7.10535184007106_0.396600276612485-2 chr9 121285681 121286686 + 0.396600276612485 NA Intergenic Intergenic -9011 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding common_peak1_25_132_0.100138809139742_7.10535184007106_0.396600276612485-4 chr9 88530424 88531011 + 0.396600276612485 NA Intergenic Intergenic -7820 NR_040721 72655 Mm.21798 NR_040721 ENSMUSG00000097195 Snhg5 2810026P18Rik|4933428I09Rik|mU50HG-b small nucleolar RNA host gene 5 ncRNA common_peak1_25_132_0.100138809139742_7.10535184007106_0.396600276612485-3 chr14 53926987 53927502 + 0.396600276612485 NA Intergenic Intergenic 326685 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding unique_peak2_25_132_0.100138809139742_7.10535184007106_0.396600276612485 chr3 132858190 132859277 + 0.396600276612485 NA intron (NR_102297, intron 1 of 3) intron (NR_102297, intron 1 of 3) 19863 NR_102297 101243624 Mm.306256 NR_102297 ENSMUSG00000106230 Gm29811 - predicted gene, 29811 ncRNA common_peak1_29_158_0.0957734773133474_7.36076969394103_0.396384209124405 chr4 145017478 145018226 + 0.396384209124405 NA intron (NM_001276465, intron 66 of 69) intron (NM_001276465, intron 66 of 69) 124715 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak2_180_1578_-0.0355881403838758_10.6070013856683_0.39634309140244 chr16 4212783 4214892 + 0.39634309140244 NA promoter-TSS (NM_001025432) promoter-TSS (NM_001025432) -433 NM_001025432 12914 Mm.132238 NM_001025432 ENSMUSG00000022521 Crebbp AW558298|CBP|CBP/p300|KAT3A|p300/CBP CREB binding protein protein-coding common_peak1_180_1578_-0.0355881403838758_10.6070013856683_0.39634309140244 chr17 36042955 36044064 + 0.39634309140244 NA promoter-TSS (NM_010397) promoter-TSS (NM_010397) 548 NM_001034909 547347 Mm.484641 NM_001034909 ENSMUSG00000073407 Gm6034 EG547347|H2-gs14-2 predicted gene 6034 protein-coding unique_peak2_42_249_0.0799428855918638_8.00575572745802_0.396283589398285 chr6 41199269 41201013 + 0.396283589398285 NA Intergenic MMVL30-int|LTR|ERV1 -102131 NM_011646 22074 Mm.383263 NM_011646 ENSMUSG00000054106 Try4 0910001B19Rik|Td trypsin 4 protein-coding common_peak1_107_845_-0.0490816639076428_9.69997302116613_0.396223798436271 chr9 44334678 44335894 + 0.396223798436271 NA 3' UTR (NM_010436, exon 1 of 1) 3' UTR (NM_010436, exon 1 of 1) 571 NM_010436 15270 Mm.245931 NM_010436 ENSMUSG00000049932 H2afx AW228881|H2A.X|H2ax|Hist5-2ax|gammaH2ax H2A histone family, member X protein-coding common_peak1_82_615_-0.0572806715265539_9.23814620493162_0.396206336438696 chr3 21987892 21988965 + 0.396206336438696 NA Intergenic Intergenic -88224 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak2_226_1992_0.0292187521486742_10.9753353709134_0.396175221997522 chr8 13593292 13596929 + 0.396175221997522 NA intron (NM_009025, intron 7 of 23) intron (NM_009025, intron 7 of 23) -32649 NM_001080781 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak2_18_88_0.124630772430493_6.53804881718164_0.396142811983599-2 chr3 108721674 108722395 + 0.396142811983599 NA intron (NM_029522, intron 1 of 14) CpG 265 NM_029522 76123 Mm.226941 NM_029522 ENSMUSG00000027883 Gpsm2 6230410J09Rik|LGN|Pins G-protein signalling modulator 2 (AGS3-like, C. elegans) protein-coding common_peak2_18_88_0.124630772430493_6.53804881718164_0.396142811983599 chr16 52199628 52200332 + 0.396142811983599 NA intron (NM_001033238, intron 17 of 17) L1M2|LINE|L1 168431 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_18_88_0.124630772430493_6.53804881718164_0.396142811983599 chr6 120112459 120112847 + 0.396142811983599 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) 19273 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding unique_peak2_18_88_0.124630772430493_6.53804881718164_0.396142811983599 chr14 64717990 64718848 + 0.396142811983599 NA intron (NM_001081177, intron 6 of 39) intron (NM_001081177, intron 6 of 39) 65888 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak2_65_467_-0.0664324607361682_8.83714848921532_0.396069196171146 chr3 89429632 89431179 + 0.396069196171146 NA promoter-TSS (NM_026869) promoter-TSS (NM_026869) 191 NM_001293763 68911 Mm.22521 NM_026869 ENSMUSG00000047824 Pygo2 1190004M21Rik pygopus 2 protein-coding common_peak1_62_403_0.0633976771999869_8.68991032135179_0.39605676545388 chr12 108617448 108618566 + 0.39605676545388 NA intron (NM_001163395, intron 1 of 12) intron (NM_001163395, intron 1 of 12) 12241 NM_001163395 14026 Mm.238841 NM_007965 ENSMUSG00000021262 Evl AI528774 Ena-vasodilator stimulated phosphoprotein protein-coding common_peak2_157_1338_-0.0382288430246387_10.367825823812_0.396044810093758 chr9 53534958 53537987 + 0.396044810093758 NA promoter-TSS (NM_001081152) promoter-TSS (NM_001081152) 199 NM_007499 11920 Mm.5088 NM_007499 ENSMUSG00000034218 Atm AI256621|C030026E19Rik ataxia telangiectasia mutated protein-coding common_peak1_389_4009_-0.021725173669747_11.9585239345074_0.396003794995097 chr19 11049186 11053091 + 0.396003794995097 NA promoter-TSS (NR_102366) promoter-TSS (NR_102366) -572 NR_102366 107350 Mm.6381 NM_001177351 ENSMUSG00000075010 AW112010 - expressed sequence AW112010 ncRNA common_peak2_85_595_0.053170960978143_9.24575400095123_0.39573549829504 chr7 44825150 44827837 + 0.39573549829504 NA intron (NM_001171024, intron 1 of 8) intron (NM_001171024, intron 1 of 8) -9795 NM_010215 14204 Mm.2565 NM_010215 ENSMUSG00000074141 Il4i1 Fig1|Fig1-ps|LAAO|LAO interleukin 4 induced 1 protein-coding common_peak2_79_544_0.0542464303391998_9.11723563483389_0.395720217864936 chr9 37207494 37208869 + 0.395720217864936 NA promoter-TSS (NM_025464) promoter-TSS (NM_025464) -42 NM_025464 66279 Mm.41451 NM_025464 ENSMUSG00000032121 Tmem218 1810021J13Rik|AV004931 transmembrane protein 218 protein-coding unique_peak2_57_363_0.0674809855002287_8.54153513294881_0.395603344051988 chr7 142055992 142057919 + 0.395603344051988 NA intron (NM_028308, intron 1 of 4) intron (NM_028308, intron 1 of 4) 4079 NM_028308 101513 Mm.53259 NM_028308 ENSMUSG00000025147 Mob2 1110017M21Rik|2700078K21Rik|AI256456|Mmh MOB kinase activator 2 protein-coding common_peak2_47_286_0.0754808526027642_8.20264735297707_0.395581961281172 chr4 151988179 151989276 + 0.395581961281172 NA TTS (NM_172705) TTS (NM_172705) 259 NM_175152 69876 Mm.226820 NM_175152 ENSMUSG00000039759 Thap3 2010013E08Rik|2210418H06Rik THAP domain containing, apoptosis associated protein 3 protein-coding common_peak2_47_286_0.0754808526027642_8.20264735297707_0.395581961281172-2 chr9 124055844 124057765 + 0.395581961281172 NA Intergenic Intergenic 34833 NM_009914 12771 Mm.57050 NM_009914 ENSMUSG00000035448 Ccr3 CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3 chemokine (C-C motif) receptor 3 protein-coding common_peak1_20_120_-0.141388593476097_6.84816894053655_0.395471607452959-3 chr9 37613133 37613697 + 0.395471607452959 NA promoter-TSS (NM_011734) promoter-TSS (NM_011734) 305 NM_011449 20686 Mm.8637 NM_011449 ENSMUSG00000001948 Spa17 Sp17 sperm autoantigenic protein 17 protein-coding unique_peak2_20_120_-0.141388593476097_6.84816894053655_0.395471607452959-3 chr8 15010867 15011799 + 0.395471607452959 NA intron (NM_029116, intron 1 of 1) CpG 308 NM_029116 74901 Mm.46675 NM_029116 ENSMUSG00000055675 Kbtbd11 2900016B01Rik|4930465M17Rik|mKIAA0711 kelch repeat and BTB (POZ) domain containing 11 protein-coding unique_peak2_20_120_-0.141388593476097_6.84816894053655_0.395471607452959 chr2 166697940 166699174 + 0.395471607452959 NA intron (NR_105783, intron 2 of 2) intron (NR_105783, intron 2 of 2) 15275 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding common_peak1_20_120_-0.141388593476097_6.84816894053655_0.395471607452959 chr13 46721119 46721681 + 0.395471607452959 NA intron (NM_175749, intron 1 of 21) intron (NM_175749, intron 1 of 21) 6449 NM_175749 218210 Mm.255398 NM_175749 ENSMUSG00000021374 Nup153 B130015D15Rik|C88147 nucleoporin 153 protein-coding unique_peak2_20_120_-0.141388593476097_6.84816894053655_0.395471607452959-2 chr5 54004937 54005839 + 0.395471607452959 NA intron (NM_001081103, intron 1 of 11) intron (NM_001081103, intron 1 of 11) 6865 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak1_20_120_-0.141388593476097_6.84816894053655_0.395471607452959-2 chr19 12575584 12575996 + 0.395471607452959 NA intron (NM_026640, intron 1 of 3) intron (NM_026640, intron 1 of 3) 2265 NM_026640 107373 Mm.1643 NM_026640 ENSMUSG00000024691 Fam111a 4632417K18Rik|AW413625 family with sequence similarity 111, member A protein-coding common_peak1_146_1162_0.0373753715907501_10.2023230672686_0.395412683283931 chr2 153161115 153162408 + 0.395412683283931 NA intron (NM_133847, intron 1 of 17) intron (NM_133847, intron 1 of 17) 460 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding common_peak2_52_324_0.071445857527296_8.38001883667947_0.395409529031135 chr16 57241825 57242235 + 0.395409529031135 NA Intergenic Intergenic -10564 NM_026254 67581 Mm.257819 NM_026254 ENSMUSG00000022749 Tbc1d23 4930451A13Rik|AU015720|AU043671|AU043778|D030022P07Rik|W51689 TBC1 domain family, member 23 protein-coding unique_peak2_45_303_-0.08285439816372_8.20650031436173_0.395261367402252 chr11 6002132 6004179 + 0.395261367402252 NA intron (NM_001174053, intron 3 of 19) intron (NM_001174053, intron 3 of 19) 47397 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding common_peak1_45_303_-0.08285439816372_8.20650031436173_0.395261367402252 chr6 97204842 97205601 + 0.395261367402252 NA 5' UTR (NM_001301857, exon 2 of 18) 5' UTR (NM_001301857, exon 2 of 18) 426 NM_001301858 22200 Mm.277626 NM_011666 ENSMUSG00000030061 Uba3 A830034N06Rik|AI256736|AI848246|AW546539|Ube1c ubiquitin-like modifier activating enzyme 3 protein-coding common_peak1_139_1093_0.0392733141036885_10.1150336798444_0.395159584854932 chr2 150310716 150312397 + 0.395159584854932 NA intron (NM_027017, intron 3 of 3) intron (NM_027017, intron 3 of 3) 51209 NM_027017 69277 Mm.272470 NM_027017 ENSMUSG00000063364 3300002I08Rik 2900016H11Rik RIKEN cDNA 3300002I08 gene protein-coding common_peak2_174_1514_-0.0355507769584591_10.5473266898811_0.395090695858075 chr4 134929429 134931830 + 0.395090695858075 NA promoter-TSS (NM_026780) promoter-TSS (NM_026780) -351 NM_026780 68592 Mm.29989 NM_026780 ENSMUSG00000028821 Syf2 1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein-coding common_peak2_154_1241_0.0363383333921448_10.2966186249166_0.395057880903195 chr11 83298157 83299813 + 0.395057880903195 NA promoter-TSS (NM_134025) promoter-TSS (NM_134025) -8 NM_134025 103737 Mm.102205 NM_134025 ENSMUSG00000018733 Pex12 AI451906 peroxisomal biogenesis factor 12 protein-coding common_peak1_154_1241_0.0363383333921448_10.2966186249166_0.395057880903195 chr11 83298082 83299740 + 0.395057880903195 NA promoter-TSS (NM_134025) promoter-TSS (NM_134025) 66 NM_134025 103737 Mm.102205 NM_134025 ENSMUSG00000018733 Pex12 AI451906 peroxisomal biogenesis factor 12 protein-coding common_peak1_186_1566_0.0331282096294441_10.6303535692873_0.394839186985861 chr13 43243514 43245422 + 0.394839186985861 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) 59704 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak1_83_624_-0.0570131133782379_9.25920582286033_0.394807661344889 chr4 116685045 116686330 + 0.394807661344889 NA promoter-TSS (NM_011034) promoter-TSS (NM_011034) 88 NM_011034 18477 Mm.30929 NM_011034 ENSMUSG00000028691 Prdx1 MSP23|NkefA|OSF-3|OSF3|PAG|Paga|PrdxI|PrxI|TDX2|TPxA|Tdpx2|prx1 peroxiredoxin 1 protein-coding common_peak1_36_234_-0.0967332953535891_7.8281502988882_0.394791244844973 chr12 69471316 69471993 + 0.394791244844973 NA intron (NR_038060, intron 2 of 4) ORR1D1|LTR|ERVL-MaLR 3896 NR_038060 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA unique_peak2_36_234_-0.0967332953535891_7.8281502988882_0.394791244844973 chr17 6769003 6770524 + 0.394791244844973 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 13017 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_102_798_-0.0505038091512375_9.61679978835236_0.394532062687688 chr7 105810145 105811166 + 0.394532062687688 NA intron (NM_025301, intron 1 of 2) intron (NM_025301, intron 1 of 2) 432 NM_025301 27397 Mm.44225 NM_025301 ENSMUSG00000030879 Mrpl17 MRP-L26|Rpml26 mitochondrial ribosomal protein L17 protein-coding common_peak1_92_657_0.0488729471523488_9.38638024731141_0.394515435699174 chr9 64340275 64341480 + 0.394515435699174 NA promoter-TSS (NM_001177784) promoter-TSS (NM_001177784) -104 NM_001177784 213550 Mm.268341 NM_172519 ENSMUSG00000032396 Dis3l AV340375 DIS3 like exosome 3'-5' exoribonuclease protein-coding common_peak1_66_475_-0.0642740631582193_8.86268073172883_0.394433858804859 chr2 30133794 30134563 + 0.394433858804859 NA intron (NM_146252, intron 1 of 11) intron (NM_146252, intron 1 of 11) 307 NM_146252 70296 Mm.19172 NM_146252 ENSMUSG00000039678 Tbc1d13 2600014A06Rik|BC025586 TBC1 domain family, member 13 protein-coding common_peak1_66_475_-0.0642740631582193_8.86268073172883_0.394433858804859-2 chr2 35447679 35449030 + 0.394433858804859 NA intron (NM_001308299, intron 1 of 7) intron (NM_001308299, intron 1 of 7) 13095 NM_001308299 14594 Mm.281124 NM_010283 ENSMUSG00000035778 Ggta1 AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT glycoprotein galactosyltransferase alpha 1, 3 protein-coding common_peak2_239_2135_0.0277974344692176_11.0745946489222_0.394123410983431 chr16 19759592 19762608 + 0.394123410983431 NA intron (NM_054052, intron 2 of 3) CpG 866 NM_001159407 108105 Mm.33935 NM_054052 ENSMUSG00000022686 B3gnt5 beta3GnT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding common_peak2_171_1412_0.0344060422927228_10.4817487714803_0.394073722432651 chr15 76722299 76725151 + 0.394073722432651 NA TTS (NM_001168288) TTS (NM_001168288) 120 NM_145472 223665 Mm.291713 NM_145472 ENSMUSG00000033707 C030006K11Rik 1110033I13Rik RIKEN cDNA C030006K11 gene protein-coding common_peak1_171_1412_0.0344060422927228_10.4817487714803_0.394073722432651 chr14 103069417 103071085 + 0.394073722432651 NA promoter-TSS (NM_001033242) promoter-TSS (NM_001033242) 35 NM_001033242 211286 Mm.295289 NM_001033242 ENSMUSG00000022125 Cln5 A730075N08Rik ceroid-lipofuscinosis, neuronal 5 protein-coding common_peak1_306_2895_0.0243453848169306_11.5120185794917_0.393987998194663 chr18 80711269 80714036 + 0.393987998194663 NA exon (NM_001164110, exon 1 of 10) exon (NM_001164110, exon 1 of 10) 419 NM_198429 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_116_930_-0.0455593917976493_9.83985766165997_0.393961254153258 chr2 168589243 168591149 + 0.393961254153258 NA non-coding (NR_111898, exon 1 of 6) non-coding (NR_111898, exon 1 of 6) 169 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak1_32_204_-0.102160151844567_7.62840002358316_0.393952809684063 chr4 101260421 101260976 + 0.393952809684063 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 4584 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak1_24_147_-0.123438173492566_7.14773427888267_0.393897261527946-5 chr9 44137288 44137864 + 0.393897261527946 NA intron (NM_023061, intron 5 of 15) B3|SINE|B2 2918 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding common_peak1_24_147_-0.123438173492566_7.14773427888267_0.393897261527946-3 chr4 133628805 133629375 + 0.393897261527946 NA intron (NM_001017968, intron 1 of 7) B1_Mur4|SINE|Alu 4339 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak1_24_147_-0.123438173492566_7.14773427888267_0.393897261527946-4 chr5 93264138 93264554 + 0.393897261527946 NA Intergenic Intergenic -3227 NM_007635 12452 Mm.3527 NM_007635 ENSMUSG00000029385 Ccng2 - cyclin G2 protein-coding common_peak1_24_147_-0.123438173492566_7.14773427888267_0.393897261527946 chr15 80220300 80220714 + 0.393897261527946 NA Intergenic Intergenic -13573 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak1_24_147_-0.123438173492566_7.14773427888267_0.393897261527946-2 chr2 73213816 73214406 + 0.393897261527946 NA intron (NM_030091, intron 1 of 7) CpG 336 NM_030091 67059 Mm.22661 NM_025942 ENSMUSG00000027108 Ola1 2510025G09Rik|2810405J23Rik|2810409H07Rik|Gtpbp9|PTD004 Obg-like ATPase 1 protein-coding unique_peak2_24_147_-0.123438173492566_7.14773427888267_0.393897261527946-2 chr17 83272321 83273363 + 0.393897261527946 NA Intergenic Intergenic 57559 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding unique_peak2_24_147_-0.123438173492566_7.14773427888267_0.393897261527946 chr13 62964266 62965327 + 0.393897261527946 NA promoter-TSS (NM_001289926) promoter-TSS (NM_001289926) -97 NM_001289926 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak2_15_71_0.126328261682856_6.23308913228374_0.393723457908232-2 chr11 96822772 96823389 + 0.393723457908232 NA intron (NM_001130450, intron 2 of 4) intron (NM_001130450, intron 2 of 4) 933 NM_001130453 18023 Mm.6743 NM_008686 ENSMUSG00000038615 Nfe2l1 AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11 nuclear factor, erythroid derived 2,-like 1 protein-coding common_peak1_15_71_0.126328261682856_6.23308913228374_0.393723457908232-3 chr6 58833089 58833458 + 0.393723457908232 NA promoter-TSS (NM_028705) promoter-TSS (NM_028705) -427 NM_028705 73998 Mm.191892 NM_028705 ENSMUSG00000029804 Herc3 5730409F18Rik|AI646603|mKIAA0032 hect domain and RLD 3 protein-coding common_peak2_15_71_0.126328261682856_6.23308913228374_0.393723457908232 chr1 160396659 160397152 + 0.393723457908232 NA intron (NM_013862, intron 17 of 20) L1_Mus3|LINE|L1 -45334 NM_001038621 29809 Mm.25833 NM_013862 ENSMUSG00000026721 Rabgap1l 5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471 RAB GTPase activating protein 1-like protein-coding common_peak1_15_71_0.126328261682856_6.23308913228374_0.393723457908232-2 chr18 82528904 82529262 + 0.393723457908232 NA intron (NM_010777, intron 3 of 6) intron (NM_010777, intron 3 of 6) -25380 NM_001025256 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_15_71_0.126328261682856_6.23308913228374_0.393723457908232 chr15 36363214 36363565 + 0.393723457908232 NA Intergenic Intergenic -80242 NM_013923 30945 Mm.5181 NM_013923 ENSMUSG00000022280 Rnf19a AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp ring finger protein 19A protein-coding common_peak1_90_687_-0.0539197119820507_9.39930489871107_0.393684366055704 chr11 32557152 32558366 + 0.393684366055704 NA intron (NM_009288, intron 2 of 18) RMER5|LTR|ERV1 24493 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_90_687_-0.0539197119820507_9.39930489871107_0.393684366055704-2 chr12 51347828 51349164 + 0.393684366055704 NA intron (NM_001015099, intron 1 of 14) CpG 266 NM_001015099 217558 Mm.253264 NM_001015099 ENSMUSG00000035293 G2e3 6030408C04Rik|9030416F18|AW046379|D930034K21Rik|mKIAA1333 G2/M-phase specific E3 ubiquitin ligase protein-coding common_peak1_12_54_0.147449219929917_5.85508432348962_0.393610822453554 chr13 43242036 43242418 + 0.393610822453554 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) 61945 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak1_28_175_-0.110768304124729_7.40404746657493_0.39356187418895 chr1 52363901 52364526 + 0.39356187418895 NA Intergenic Intergenic -130981 NM_001113383 14660 Mm.398608 NM_001081081 ENSMUSG00000026103 Gls 6330442B14|AI314027|B230365M23Rik glutaminase protein-coding common_peak1_28_175_-0.110768304124729_7.40404746657493_0.39356187418895-2 chr8 72303644 72304261 + 0.39356187418895 NA Intergenic Intergenic -15110 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_34_192_0.0889886772554531_7.63695137589581_0.393484516818896 chr12 70078677 70079315 + 0.393484516818896 NA intron (NM_001286080, intron 4 of 29) intron (NM_001286080, intron 4 of 29) 23858 NM_001081453 18080 Mm.244047 NM_008697 ENSMUSG00000021068 Nin 3110068G20Rik|AI385615|AU024711|mKIAA1565 ninein protein-coding unique_peak2_34_192_0.0889886772554531_7.63695137589581_0.393484516818896 chr6 97180859 97182077 + 0.393484516818896 NA Intergenic Intergenic -2344 NM_001081111 232286 Mm.30893 NM_001081111 ENSMUSG00000030059 Tmf1 7030402D04Rik|Gm153|Tmf1` TATA element modulatory factor 1 protein-coding common_peak1_164_1341_0.035256578339018_10.4077972453697_0.39345590407957 chr2 119594003 119595191 + 0.39345590407957 NA intron (NR_027832, intron 1 of 2) CpG 301 NR_015473 66602 Mm.379181 NR_015473 ENSMUSG00000085438 1700020I14Rik 1190006L01Rik|4933437I03Rik|AI451541|AI585852|AW538376|AW558897|Cyrano RIKEN cDNA 1700020I14 gene ncRNA common_peak1_69_460_0.0594350852805512_8.87834048306961_0.393440049895497 chr11 121100851 121102478 + 0.393440049895497 NA Intergenic Intergenic 17013 NM_027622 70956 Mm.158506 NM_027622 ENSMUSG00000039337 Tex19.2 4921530G04Rik|Tex19b testis expressed gene 19.2 protein-coding common_peak2_41_272_-0.0886701859349976_8.04842204795235_0.393401788741643 chr9 25185534 25187090 + 0.393401788741643 NA Intergenic Intergenic -34531 NM_020586 80517 Mm.142843 NM_020586 ENSMUSG00000008429 Herpud2 5031400M07Rik|AB041580 HERPUD family member 2 protein-coding unique_peak2_43_257_0.0751827984570532_8.04881865465178_0.393401788741643 chr10 79936201 79937792 + 0.393401788741643 NA intron (NM_001288625, intron 3 of 8) intron (NM_001288625, intron 3 of 8) 9655 NM_001288625 13496 Mm.301282 NM_007880 ENSMUSG00000019564 Arid3a Bright|Dri1|Dril1 AT rich interactive domain 3A (BRIGHT-like) protein-coding common_peak1_460_4786_0.0187277634366172_12.2342699724381_0.393334026214057 chr1 195241545 195242169 + 0.393334026214057 NA Intergenic CpG -65142 NM_007758 12902 Mm.235387 NM_007758 ENSMUSG00000026616 Cr2 C3DR|CD21|CD35|Cr-1|Cr-2|Cr1 complement receptor 2 protein-coding common_peak1_53_332_0.0694415109546895_8.41409912254861_0.393191628722315 chr13 95566817 95567872 + 0.393191628722315 NA Intergenic Intergenic -42104 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak1_223_1960_0.0290278633848438_10.9518877518846_0.393186277040616 chr7 144581427 144583320 + 0.393186277040616 NA promoter-TSS (NM_010175) promoter-TSS (NM_010175) 63 NM_010175 14082 Mm.5126 NM_010175 ENSMUSG00000031077 Fadd Mort1/FADD Fas (TNFRSF6)-associated via death domain protein-coding common_peak1_265_2516_-0.0269768773122632_11.2840010625048_0.39318604867543 chr17 35241264 35243474 + 0.39318604867543 NA promoter-TSS (NM_001252457) promoter-TSS (NM_001252457) -448 NM_001252457 53817 Mm.439827 NM_019693 ENSMUSG00000019432 Ddx39b 0610030D10Rik|AI428441|Bat-1|Bat1|Bat1a|D17H6S81E|D17H6S81E-1|D6S81Eh DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B protein-coding common_peak1_177_1545_-0.034693923974304_10.5769776419377_0.393181057237959 chr2 167061554 167063865 + 0.393181057237959 NA promoter-TSS (NM_001081005) promoter-TSS (NM_001081005) -225 NM_001081005 68949 Mm.391959 NM_001081005 Zfas1 1500012F01Rik|Zfos1 zinc finger, NFX1-type containing 1, antisense RNA 1 ncRNA common_peak1_177_1545_-0.034693923974304_10.5769776419377_0.393181057237959-2 chr5 120612180 120614009 + 0.393181057237959 NA promoter-TSS (NM_028041) promoter-TSS (NM_028041) -36 NM_028041 71990 Mm.24495 NM_028041 ENSMUSG00000029599 Ddx54 2410015A15Rik|AI414901|DP97 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 protein-coding unique_peak2_17_100_-0.153526120879127_6.58144842231223_0.393152724387913 chr1 30898180 30898850 + 0.393152724387913 NA Intergenic Lx2B2|LINE|L1 -35259 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik|mKIAA0244 PHD finger protein 3 protein-coding common_peak2_17_100_-0.153526120879127_6.58144842231223_0.393152724387913 chr15 101240859 101241597 + 0.393152724387913 NA Intergenic MIRc|SINE|MIR -16042 NR_045328 380977 Mm.399924 NR_045326 ENSMUSG00000097915 A330009N23Rik - RIKEN cDNA A330009N23 gene ncRNA common_peak1_17_100_-0.153526120879127_6.58144842231223_0.393152724387913 chr1 59914254 59914690 + 0.393152724387913 NA intron (NM_001037725, intron 1 of 7) B1_Mur1|SINE|Alu 1466 NM_001037725 72750 Mm.258250 NM_001037725 ENSMUSG00000041040 Fam117b 2810425F24Rik|6330416D14Rik|Als2cr13 family with sequence similarity 117, member B protein-coding common_peak1_17_100_-0.153526120879127_6.58144842231223_0.393152724387913-2 chr15 85879350 85879796 + 0.393152724387913 NA intron (NM_028063, intron 1 of 10) intron (NM_028063, intron 1 of 10) 246 NM_028063 72026 Mm.158211 NM_028063 ENSMUSG00000022386 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding common_peak2_48_294_0.0723050926614803_8.24072369057994_0.393076679343847 chr13 108288856 108290311 + 0.393076679343847 NA Intergenic Intergenic -26754 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak2_48_294_0.0723050926614803_8.24072369057994_0.393076679343847-2 chr7 16738003 16739031 + 0.393076679343847 NA promoter-TSS (NM_198613) promoter-TSS (NM_198613) 73 NM_198613 232910 Mm.333597 NM_198613 ENSMUSG00000008036 Ap2s1 AI043088 adaptor-related protein complex 2, sigma 1 subunit protein-coding unique_peak2_22_113_0.105570789928769_6.88567540912913_0.393069092090684-2 chr18 38351851 38352741 + 0.393069092090684 NA Intergenic RMER4B|LTR|ERVK -13303 NM_011937 26384 Mm.22374 NM_011937 ENSMUSG00000052102 Gnpda1 GNPDA|Gnp1|Gnpi|oscillin glucosamine-6-phosphate deaminase 1 protein-coding common_peak2_22_113_0.105570789928769_6.88567540912913_0.393069092090684 chr17 28735849 28736800 + 0.393069092090684 NA intron (NM_001168508, intron 8 of 11) intron (NM_001168508, intron 8 of 11) -32993 NM_011950 26415 Mm.27970 NM_011950 ENSMUSG00000004864 Mapk13 SAPK4|Serk4 mitogen-activated protein kinase 13 protein-coding unique_peak2_22_113_0.105570789928769_6.88567540912913_0.393069092090684 chr12 76903974 76904841 + 0.393069092090684 NA intron (NM_145927, intron 7 of 11) B1_Mm|SINE|Alu 57841 NM_008558 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak2_22_113_0.105570789928769_6.88567540912913_0.393069092090684-2 chr8 122288063 122288792 + 0.393069092090684 NA intron (NM_009569, intron 1 of 9) intron (NM_009569, intron 1 of 9) 6286 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak1_75_510_0.056409344831982_9.02538415335361_0.393026565607541 chr4 107922808 107923574 + 0.393026565607541 NA intron (NM_009949, intron 1 of 4) intron (NM_009949, intron 1 of 4) 398 NM_009949 12896 Mm.307620 NM_009949 ENSMUSG00000028607 Cpt2 AI323697|CPTII carnitine palmitoyltransferase 2 protein-coding common_peak2_75_510_0.056409344831982_9.02538415335361_0.393026565607541 chr6 50451398 50454088 + 0.393026565607541 NA intron (NM_001163645, intron 1 of 21) intron (NM_001163645, intron 1 of 21) 3427 NM_001163645 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak1_97_751_-0.051100303580597_9.52903869988734_0.392921334012548 chr9 118506004 118507462 + 0.392921334012548 NA intron (NM_018748, intron 1 of 23) CpG 415 NM_018748 54214 Mm.10409 NM_018748 ENSMUSG00000038708 Golga4 AI225887|AU019508|Olp-1 golgi autoantigen, golgin subfamily a, 4 protein-coding common_peak1_146_1226_-0.0399087805989371_10.2409651433634_0.392916464733871 chr2 32137114 32138230 + 0.392916464733871 NA Intergenic Intergenic -13476 NM_172661 227723 Mm.25504 NM_172661 ENSMUSG00000039262 Prrc2b 5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515 proline-rich coiled-coil 2B protein-coding common_peak2_81_561_0.053629256030856_9.16124094823635_0.392905645655719 chr11 103116240 103117586 + 0.392905645655719 NA 5' UTR (NM_138753, exon 1 of 1) 5' UTR (NM_138753, exon 1 of 1) 588 NM_138753 192231 Mm.8763 NM_138753 ENSMUSG00000048878 Hexim1 7330426E13Rik|CLP-1|Clp1|HIS1 hexamethylene bis-acetamide inducible 1 protein-coding common_peak1_157_1271_0.0358284470153176_10.330797178792_0.392866818499398 chr17 45432701 45433815 + 0.392866818499398 NA promoter-TSS (NR_130961) promoter-TSS (NR_130961) 449 NM_152810 71702 Mm.28270 NM_152810 ENSMUSG00000023932 Cdc5l 1200002I02Rik|AA408004|PCDC5RP cell division cycle 5-like (S. pombe) protein-coding common_peak2_46_311_-0.0822711314362312_8.24426665314413_0.392772824171751 chr14 53926390 53927780 + 0.392772824171751 NA Intergenic Intergenic 326844 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_67_484_-0.0650800537276073_8.88930091021069_0.392660101991829 chr5 74092425 74093971 + 0.392660101991829 NA promoter-TSS (NR_031758) promoter-TSS (NR_031758) 115 NR_015531 70036 Mm.46547 NR_015531 ENSMUSG00000053656 Dancr 2700023E23Rik differentiation antagonizing non-protein coding RNA ncRNA common_peak1_51_351_-0.0773980628100084_8.42073258723229_0.392653347746345 chr9 118415168 118416093 + 0.392653347746345 NA Intergenic Intergenic -14209 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak2_51_351_-0.0773980628100084_8.42073258723229_0.392653347746345 chr1 185207504 185209186 + 0.392653347746345 NA intron (NM_001163754, intron 1 of 34) intron (NM_001163754, intron 1 of 34) 4177 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding common_peak2_26_138_0.103266494116087_7.17057431978155_0.392602305370193 chr12 16810610 16811651 + 0.392602305370193 NA non-coding (NR_027677, exon 1 of 8) non-coding (NR_027677, exon 1 of 8) 165 NM_033270 50496 Mm.23296 NM_033270 ENSMUSG00000057469 E2f6 AI462434|E2F6a|E2F6b|EMA E2F transcription factor 6 protein-coding common_peak1_30_165_0.0916427733873819_7.42086081804062_0.392479182881675 chr14 70271760 70272383 + 0.392479182881675 NA intron (NM_001304992, intron 1 of 12) intron (NM_001304992, intron 1 of 12) 17426 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak1_135_1055_0.0389790751747867_10.0638836569458_0.392356593114966 chr1 153084002 153085241 + 0.392356593114966 NA intron (NM_175460, intron 4 of 10) intron (NM_175460, intron 4 of 10) 101826 NM_008485 16782 Mm.329272 NM_008485 ENSMUSG00000026479 Lamc2 AA589349 laminin, gamma 2 protein-coding common_peak2_271_2493_0.0257397558899246_11.2971156277746_0.392343581050076 chr14 55642598 55645084 + 0.392343581050076 NA promoter-TSS (NM_028780) promoter-TSS (NM_028780) -35 NM_028780 74140 Mm.132857 NM_028780 ENSMUSG00000002320 Tm9sf1 1200014D02Rik|AI893436|MP70 transmembrane 9 superfamily member 1 protein-coding common_peak1_64_420_0.0592380972665012_8.74729547169965_0.392294893396183 chr1 92807057 92808212 + 0.392294893396183 NA Intergenic Intergenic -24052 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_37_241_-0.0918867226913482_7.87291987592892_0.391985571099336 chr7 25394963 25396151 + 0.391985571099336 NA exon (NM_010719, exon 1 of 10) exon (NM_010719, exon 1 of 10) 430 NM_010719 16890 Mm.158548 NM_010719 ENSMUSG00000003123 Lipe 4933403G17Rik|HSL lipase, hormone sensitive protein-coding common_peak1_163_1399_-0.0365432243941903_10.4329394996352_0.39185074150074 chr15 99971936 99973674 + 0.39185074150074 NA promoter-TSS (NM_001284521) promoter-TSS (NM_001284521) 25 NM_001284523 207214 Mm.28811 NM_001024526 ENSMUSG00000023025 Larp4 DXErtd793|DXErtd793e La ribonucleoprotein domain family, member 4 protein-coding common_peak1_333_3214_0.0227558946590065_11.6619809695448_0.391643026757767 chr15 97372200 97375017 + 0.391643026757767 NA intron (NM_172293, intron 4 of 5) intron (NM_172293, intron 4 of 5) -126321 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak1_59_380_0.0616215562907385_8.60445796563869_0.391469563979074 chr17 33780829 33782121 + 0.391469563979074 NA promoter-TSS (NM_020581) promoter-TSS (NM_020581) 100 NM_020581 57875 Mm.196189 NM_020581 ENSMUSG00000002289 Angptl4 Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158 angiopoietin-like 4 protein-coding unique_peak2_14_81_-0.175507883206736_6.26979806301472_0.391313637065645 chr15 82363539 82364177 + 0.391313637065645 NA Intergenic RLTR6-int|LTR|ERV1 -9567 NM_025987 67130 Mm.27570 NM_025987 ENSMUSG00000022450 Ndufa6 14kDa|2700038D15Rik|B230217P19Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14) protein-coding common_peak1_14_81_-0.175507883206736_6.26979806301472_0.391313637065645-6 chr8 3279202 3279521 + 0.391313637065645 NA 5' UTR (NM_010568, exon 1 of 21) 5' UTR (NM_010568, exon 1 of 21) 256 NM_010568 16337 Mm.268003 NM_010568 ENSMUSG00000005534 Insr 4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B insulin receptor protein-coding common_peak1_14_81_-0.175507883206736_6.26979806301472_0.391313637065645-3 chr11 118222557 118222956 + 0.391313637065645 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) -10014 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding common_peak1_14_81_-0.175507883206736_6.26979806301472_0.391313637065645-4 chr4 149690668 149691024 + 0.391313637065645 NA intron (NM_001029837, intron 1 of 23) ID_B1|SINE|B4 7862 NM_001164050 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_14_81_-0.175507883206736_6.26979806301472_0.391313637065645 chr10 112000746 112001139 + 0.391313637065645 NA Intergenic MIRc|SINE|MIR -3678 NM_028608 73690 Mm.173790 NM_028608 ENSMUSG00000056888 Glipr1 2410114O14Rik|RTVP-1|RTVP1|mRTVP-1 GLI pathogenesis-related 1 (glioma) protein-coding common_peak1_14_81_-0.175507883206736_6.26979806301472_0.391313637065645-5 chr6 59416602 59417061 + 0.391313637065645 NA intron (NM_183183, intron 1 of 1) intron (NM_183183, intron 1 of 1) 9459 NM_183183 243385 Mm.138080 NM_183183 ENSMUSG00000045441 Gprin3 C030038J10Rik|C730021L23 GPRIN family member 3 protein-coding common_peak1_14_81_-0.175507883206736_6.26979806301472_0.391313637065645-2 chr11 95041665 95042071 + 0.391313637065645 NA promoter-TSS (NM_133667) promoter-TSS (NM_133667) -497 NM_133667 18604 Mm.29768 NM_133667 ENSMUSG00000038967 Pdk2 - pyruvate dehydrogenase kinase, isoenzyme 2 protein-coding common_peak2_209_1810_0.0296217109130072_10.8373816864067_0.391297065208303 chr9 106890919 106893131 + 0.391297065208303 NA promoter-TSS (NM_029103) promoter-TSS (NM_029103) -87 NM_029103 74840 Mm.29778 NM_029103 ENSMUSG00000032575 Manf 3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17 mesencephalic astrocyte-derived neurotrophic factor protein-coding common_peak2_57_399_-0.0685805640758002_8.60956590773683_0.391237626418088 chr15 76343098 76344456 + 0.391237626418088 NA intron (NM_025567, intron 1 of 6) CpG 254 NM_025567 66445 Mm.29196 NM_025567 ENSMUSG00000022551 Cyc1 2610002H19Rik|AA408921|Cyct1 cytochrome c-1 protein-coding common_peak1_126_1027_-0.0434138550198337_9.98391762168396_0.391216204285652 chr11 98493144 98495155 + 0.391216204285652 NA intron (NM_011771, intron 3 of 7) intron (NM_011771, intron 3 of 7) 47315 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding common_peak1_108_801_0.0442838090747166_9.66960033099228_0.391200619474919 chr11 76482257 76483994 + 0.391200619474919 NA intron (NM_198018, intron 2 of 21) intron (NM_198018, intron 2 of 21) -14660 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak2_54_340_0.0676630893617425_8.44745947370505_0.391075585566101 chr1 37540316 37541692 + 0.391075585566101 NA promoter-TSS (NM_173870) promoter-TSS (NM_173870) 12 NM_173870 269181 Mm.25861 NM_173870 ENSMUSG00000026110 Mgat4a 9530018I07Rik|GnT-IVa|glcNAc-T-IVa mannoside acetylglucosaminyltransferase 4, isoenzyme A protein-coding common_peak2_44_264_0.0763300881140694_8.0880135935076_0.391019581430916 chr2 25607740 25608830 + 0.391019581430916 NA TTS (NM_029859) TTS (NM_029859) 161 NM_001024616 227624 Mm.29600 NM_001024616 ENSMUSG00000015087 Rabl6 B230208H17Rik|Rbel1|Rbel1a|Rbel1b|parf RAB, member RAS oncogene family-like 6 protein-coding unique_peak2_44_264_0.0763300881140694_8.0880135935076_0.391019581430916 chr3 106831341 106833136 + 0.391019581430916 NA Intergenic RLTR4_MM-int|LTR|ERV1 -9681 NM_146489 258482 Mm.377527 NM_146489 ENSMUSG00000043529 Olfr266 MOR122-2 olfactory receptor 266 protein-coding common_peak1_86_650_-0.053715902499782_9.31965578191574_0.390988571902201 chr11 109361485 109362755 + 0.390988571902201 NA promoter-TSS (NM_010303) promoter-TSS (NM_010303) -674 NM_010303 14674 Mm.193925 NM_010303 ENSMUSG00000020611 Gna13 AU024132|AU043124|Galpha13 guanine nucleotide binding protein, alpha 13 protein-coding common_peak1_189_1672_-0.0331396285767855_10.69165191575_0.390924394004346 chr1 185362218 185363992 + 0.390924394004346 NA promoter-TSS (NM_029735) promoter-TSS (NM_029735) 10 NM_029735 107508 Mm.154511 NM_029735 ENSMUSG00000026615 Eprs 2410081F06Rik|3010002K18Rik|C79379|Qprs glutamyl-prolyl-tRNA synthetase protein-coding common_peak2_21_126_-0.128886944078214_6.92424121473306_0.39078581421855 chr6 17737330 17738264 + 0.39078581421855 NA intron (NM_001289625, intron 1 of 15) intron (NM_001289625, intron 1 of 15) -5795 NM_001289629 64213 Mm.12051 NM_022332 ENSMUSG00000029534 St7 9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding common_peak2_21_126_-0.128886944078214_6.92424121473306_0.39078581421855-2 chr7 135735638 135736467 + 0.39078581421855 NA Intergenic Intergenic -19673 NM_001081117 17345 Mm.4078 NM_001081117 ENSMUSG00000031004 Mki67 D630048A14Rik|Ki-67|Ki67 antigen identified by monoclonal antibody Ki 67 protein-coding common_peak1_33_211_-0.0977718824026717_7.67903451336186_0.3907709868258 chr18 76930017 76930399 + 0.3907709868258 NA exon (NM_025409, exon 1 of 3) exon (NM_025409, exon 1 of 3) 181 NM_025409 66191 Mm.28593 NM_025409 ENSMUSG00000090000 Ier3ip1 1110057H19Rik|AI644142|AL022842|AL022863|AV026606 immediate early response 3 interacting protein 1 protein-coding common_peak1_33_211_-0.0977718824026717_7.67903451336186_0.3907709868258-2 chr3 9801698 9802308 + 0.3907709868258 NA intron (NM_001195031, intron 1 of 8) L1MDa|LINE|L1 31676 NM_053182 94212 Mm.23897 NM_053182 ENSMUSG00000027508 Pag1 Cbp|F730007C19Rik|Pag phosphoprotein associated with glycosphingolipid microdomains 1 protein-coding common_peak1_80_597_-0.0576595912052262_9.19517187859549_0.390710403233069-2 chr5 3343226 3344871 + 0.390710403233069 NA intron (NM_009873, intron 1 of 7) CpG-10807 155 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak1_80_597_-0.0576595912052262_9.19517187859549_0.390710403233069 chr16 90220541 90221501 + 0.390710403233069 NA intron (NM_011434, intron 1 of 4) CpG 279 NM_011434 20655 Mm.276325 NM_011434 ENSMUSG00000022982 Sod1 B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1 superoxide dismutase 1, soluble protein-coding common_peak2_271_2585_-0.0265210540906597_11.3232460327649_0.390704026481703 chr11 3104172 3106750 + 0.390704026481703 NA Intergenic IAPLTR3-int|LTR|ERVK -18560 NR_003517 236604 Mm.247625 NM_001004146 Pisd-ps1 - phosphatidylserine decarboxylase, pseudogene 1 pseudo common_peak2_47_318_-0.0770248344864175_8.27890019652166_0.390700746524005 chr8 35587562 35588883 + 0.390700746524005 NA 5' UTR (NM_001081279, exon 1 of 3) 5' UTR (NM_001081279, exon 1 of 3) 424 NM_001081279 52065 Mm.103246 NM_001081279 ENSMUSG00000070056 Mfhas1 2310066G09Rik|D8Ertd91e malignant fibrous histiocytoma amplified sequence 1 protein-coding common_peak2_49_302_0.0694535198497892_8.27790074339785_0.390700746523807 chr7 101361467 101363005 + 0.390700746523807 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) 14167 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_49_302_0.0694535198497892_8.27790074339785_0.390700746523807 chr13 51798663 51799689 + 0.390700746523807 NA Intergenic Intergenic -5429 NM_013660 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_185_1557_0.0319495140122772_10.6214542750678_0.390372519730656 chr8 90886278 90888186 + 0.390372519730656 NA intron (NM_177224, intron 2 of 39) RLTR4_MM-int|LTR|ERV1 -45017 NM_001310530 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding unique_peak2_19_94_0.121278619299829_6.63049491798086_0.390344970638848 chr11 100921466 100922207 + 0.390344970638848 NA intron (NM_213659, intron 1 of 23) intron (NM_213659, intron 1 of 23) 17704 NM_213660 20848 Mm.249934 NM_011486 ENSMUSG00000004040 Stat3 1110034C02Rik|AW109958|Aprf signal transducer and activator of transcription 3 protein-coding common_peak2_35_199_0.0874414832842989_7.68757693141687_0.390334144922704 chr1 161670799 161672042 + 0.390334144922704 NA Intergenic Intergenic 117075 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_35_199_0.0874414832842989_7.68757693141687_0.390334144922704-2 chr3 131271579 131272738 + 0.390334144922704 NA promoter-TSS (NM_008212) promoter-TSS (NM_008212) -57 NM_008212 15107 Mm.260164 NM_008212 ENSMUSG00000027984 Hadh AA409008|AU019341|AW742602|HCDH|Hadhsc|Schad hydroxyacyl-Coenzyme A dehydrogenase protein-coding common_peak2_142_1185_-0.0396979479635764_10.1920393205642_0.39024958021181 chr5 76183198 76184958 + 0.39024958021181 NA 5' UTR (NM_011626, exon 1 of 6) 5' UTR (NM_011626, exon 1 of 6) 198 NM_011626 21982 Mm.790 NM_011626 ENSMUSG00000029234 Tmem165 AV026557|Tpardl|Tparl|pFT27 transmembrane protein 165 protein-coding common_peak1_177_1474_0.0331314408139782_10.5430649595436_0.390205816602051 chr14 65112467 65114584 + 0.390205816602051 NA Intergenic Intergenic -15419 NM_018788 54616 Mm.103748 NM_018788 ENSMUSG00000021978 Extl3 2900009G18Rik|AU040105|Ext1l|mKIAA0519 exostoses (multiple)-like 3 protein-coding common_peak2_123_941_0.0403235774942345_9.8997450383599_0.390165877947955 chr19 3911951 3913815 + 0.390165877947955 NA promoter-TSS (NM_144870) promoter-TSS (NM_144870) -109 NM_001271444 225887 Mm.44227 NM_144870 ENSMUSG00000059734 Ndufs8 BC021616|CI-23kD|TYKY NADH dehydrogenase (ubiquinone) Fe-S protein 8 protein-coding common_peak2_433_4564_-0.0195685196854516_12.1466148850289_0.39014557733361 chr1 36760697 36769052 + 0.39014557733361 NA intron (NM_001289766, intron 1 of 12) intron (NM_001289766, intron 1 of 12) 359 NM_001289766 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding common_peak1_199_1779_-0.0318094001583074_10.7817568257746_0.390111446432177 chr5 24750575 24752376 + 0.390111446432177 NA intron (NM_153076, intron 3 of 3) intron (NM_153076, intron 3 of 3) 6368 NM_153076 214301 Mm.63484 NM_153076 ENSMUSG00000038135 Crygn - crystallin, gamma N protein-coding common_peak2_169_1392_0.0342746164375942_10.4611168508201_0.390110301260496 chr2 150666652 150669188 + 0.390110301260496 NA exon (NM_080575, exon 1 of 14) exon (NM_080575, exon 1 of 14) 320 NM_080575 68738 Mm.7044 NM_080575 ENSMUSG00000027452 Acss1 1110032O15Rik|AI788978|Acas2|Acas2l|AceCS2 acyl-CoA synthetase short-chain family member 1 protein-coding common_peak2_161_1312_0.0343031932863482_10.3758027975361_0.390032413948759 chr13 119428231 119430173 + 0.390032413948759 NA intron (NM_145457, intron 1 of 10) CpG 300 NM_145457 218693 Mm.490243 NM_145457 ENSMUSG00000025451 Paip1 PAIP-1 polyadenylate binding protein-interacting protein 1 protein-coding unique_peak2_29_182_-0.10704340568634_7.46217813544087_0.389880172673399 chr16 94697985 94699322 + 0.389880172673399 NA Intergenic Intergenic 127746 NM_001113389 13548 Mm.310973 NM_007890 ENSMUSG00000022897 Dyrk1a 2310043O08Rik|D16Ertd272e|D16Ertd493e|Dyrk|ENSMUSG00000074897|Gm10783|Mnbh|Mp86|mmb dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a protein-coding common_peak1_96_693_0.0465465107851486_9.46206510797083_0.389741237586323 chr11 54866343 54867135 + 0.389741237586323 NA intron (NM_008248, intron 1 of 2) CpG 301 NM_008248 15254 Mm.425 NM_008248 ENSMUSG00000020267 Hint1 AA673479|Hint|Ipk1|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding common_peak2_96_693_0.0465465107851486_9.46206510797083_0.389741237586323 chr3 89730240 89731707 + 0.389741237586323 NA intron (NM_001146296, intron 1 of 14) intron (NM_001146296, intron 1 of 14) 255 NM_019655 56417 Mm.316628 NM_019655 ENSMUSG00000027951 Adar AV242451|Adar1|Adar1p110|Adar1p150|mZaADAR adenosine deaminase, RNA-specific protein-coding common_peak2_81_605_-0.055118407221169_9.21561477986237_0.389502447254975 chr11 94547951 94549900 + 0.389502447254975 NA intron (NM_001013381, intron 1 of 8) CpG 282 NM_001013381 237926 Mm.342275 NM_001013381 ENSMUSG00000039096 Rsad1 B430319G23|BC056485 radical S-adenosyl methionine domain containing 1 protein-coding common_peak2_240_2147_0.0270732172692369_11.08231488662_0.389372644002417 chr10 93324827 93327554 + 0.389372644002417 NA Intergenic Intergenic -10042 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak1_38_248_-0.0870584824602201_7.91647269083797_0.389342953452606 chr13 43201958 43202574 + 0.389342953452606 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -30765 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_299_2815_0.0239427120250841_11.4714029746498_0.389144332113384 chr19 5687803 5690472 + 0.389144332113384 NA promoter-TSS (NM_144868) promoter-TSS (NM_144868) 6 NM_022012 26403 Mm.185026 NM_022012 ENSMUSG00000004054 Map3k11 2610017K16Rik|Mlk3|PTK1|SPRK mitogen-activated protein kinase kinase kinase 11 protein-coding common_peak1_117_885_0.0409758276731633_9.8116508023916_0.389124762102805 chr1 171150043 171151307 + 0.389124762102805 NA promoter-TSS (NM_008623) promoter-TSS (NM_008623) -38 NM_008623 17528 Mm.9986 NM_008623 ENSMUSG00000056569 Mpz Mpp|P-zero|P0 myelin protein zero protein-coding common_peak2_66_436_0.0590542306491244_8.80101658482516_0.389016635505491 chr2 150607816 150609373 + 0.389016635505491 NA promoter-TSS (NM_027977) promoter-TSS (NM_027977) -71 NM_027977 71881 Mm.26599 NM_027977 ENSMUSG00000033096 Apmap 2310001A20Rik|AI314817 adipocyte plasma membrane associated protein protein-coding common_peak2_94_723_-0.0513760968079939_9.47415783867921_0.388992548113442 chr1 155145521 155147142 + 0.388992548113442 NA intron (NM_008209, intron 1 of 5) intron (NM_008209, intron 1 of 5) 449 NM_008209 15064 Mm.7580 NM_008209 ENSMUSG00000026471 Mr1 H2ls major histocompatibility complex, class I-related protein-coding unique_peak2_31_172_0.0882373466747994_7.47874690097412_0.38888147555088 chr14 30875195 30876511 + 0.38888147555088 NA 3' UTR (NM_028839, exon 8 of 8) 3' UTR (NM_028839, exon 8 of 8) -3404 NM_181390 66175 Mm.220895 NM_181390 ENSMUSG00000042485 Mustn1 1110028G01Rik|Mustang musculoskeletal, embryonic nuclear protein 1 protein-coding common_peak1_31_172_0.0882373466747994_7.47874690097412_0.38888147555088 chr5 53566475 53567075 + 0.38888147555088 NA intron (NM_001080928, intron 1 of 10) intron (NM_001080928, intron 1 of 10) 10996 NM_001080928 19664 Mm.209292 NM_009035 ENSMUSG00000039191 Rbpj AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh recombination signal binding protein for immunoglobulin kappa J region protein-coding common_peak1_31_172_0.0882373466747994_7.47874690097412_0.38888147555088-2 chr9 21328157 21328831 + 0.38888147555088 NA intron (NM_001199186, intron 1 of 21) ID_B1|SINE|B4 7775 NM_001199186 68682 Mm.148425 NM_152808 ENSMUSG00000057193 Slc44a2 1110028E10Rik|CTL2 solute carrier family 44, member 2 protein-coding common_peak1_331_3191_0.0224855553187169_11.6514877138817_0.388828206486865 chr2 166711718 166713905 + 0.388828206486865 NA intron (NR_105783, intron 2 of 2) intron (NR_105783, intron 2 of 2) 1021 NM_177782 277360 Mm.34420 NM_177782 ENSMUSG00000039621 Prex1 G630042G04|P-REX1|Setd6 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding common_peak1_286_2759_-0.0254731773346357_11.4177159629982_0.388707596754345 chr2 104492904 104495182 + 0.388707596754345 NA 5' UTR (NM_001145824, exon 1 of 16) 5' UTR (NM_001145824, exon 1 of 16) 446 NM_010434 15259 Mm.257925 NM_010434 ENSMUSG00000027177 Hipk3 DYRK6|FIST3|PKY|mir-1902 homeodomain interacting protein kinase 3 protein-coding unique_peak2_23_119_0.106884872483576_6.96033303185031_0.388613109743914 chr1 177792941 177793724 + 0.388613109743914 NA intron (NM_007422, intron 1 of 12) intron (NM_007422, intron 1 of 12) 3177 NM_007422 11566 Mm.338021 NM_007422 ENSMUSG00000015961 Adss AI314886|AS|Adss2 adenylosuccinate synthetase, non muscle protein-coding common_peak2_23_119_0.106884872483576_6.96033303185031_0.388613109743914 chr13 43235505 43236275 + 0.388613109743914 NA intron (NM_001033399, intron 1 of 1) B1_Mus2|SINE|Alu -64389 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_72_486_0.0545410643032866_8.95504849423398_0.388595299801029 chr4 49520597 49521829 + 0.388595299801029 NA promoter-TSS (NM_001289901) promoter-TSS (NM_001289901) 37 NM_001289901 230162 Mm.186994 NM_145547 ENSMUSG00000039634 Zfp189 BB131811|C430015I23Rik zinc finger protein 189 protein-coding common_peak1_48_326_-0.0762705885873984_8.31501153120438_0.388444396337465 chr6 8485155 8486181 + 0.388444396337465 NA Intergenic Intergenic 23493 NR_040452 320312 Mm.374890 NR_040452 ENSMUSG00000087305 A430035B10Rik 2810488G03Rik RIKEN cDNA A430035B10 gene ncRNA common_peak2_48_326_-0.0762705885873984_8.31501153120438_0.388444396337465 chr6 118138343 118139393 + 0.388444396337465 NA intron (NM_030165, intron 1 of 7) CpG 272 NM_030165 78752 Mm.300317 NM_030165 ENSMUSG00000042042 Csgalnact2 4632415D10Rik|Galnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_43_287_-0.0835149475620049_8.12816752766131_0.388443223276854 chr11 64018815 64019686 + 0.388443223276854 NA intron (NM_178379, intron 4 of 6) intron (NM_178379, intron 4 of 6) 55024 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak2_45_272_0.0723159743600128_8.12891512809986_0.388443223276854-2 chr6 114679550 114681534 + 0.388443223276854 NA intron (NM_028835, intron 5 of 18) B1_Mur1|SINE|Alu 37445 NM_001253717 74244 Mm.275332 NM_028835 ENSMUSG00000030314 Atg7 1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553 autophagy related 7 protein-coding common_peak2_45_272_0.0723159743600128_8.12891512809986_0.388443223276854 chr2 34406629 34407501 + 0.388443223276854 NA 5' UTR (NM_177345, exon 1 of 12) 5' UTR (NM_177345, exon 1 of 12) 214 NM_001290626 227743 Mm.270866 NM_177345 ENSMUSG00000038696 Mapkap1 AI591529|D230039K05Rik|Sin1 mitogen-activated protein kinase associated protein 1 protein-coding unique_peak2_43_287_-0.0835149475620049_8.12816752766131_0.388443223276854 chr3 69468012 69469461 + 0.388443223276854 NA intron (NM_178726, intron 1 of 3) intron (NM_178726, intron 1 of 3) 130224 NM_020026 26879 Mm.153710 NM_020026 ENSMUSG00000043300 B3galnt1 B3galt3|b3GT3 UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1 protein-coding common_peak1_45_272_0.0723159743600128_8.12891512809986_0.388443223276854 chr9 37232847 37233691 + 0.388443223276854 NA intron (NM_001145960, intron 17 of 18) intron (NM_001145960, intron 17 of 18) 22469 NM_020258 56857 Mm.440037 NM_020258 ENSMUSG00000032122 Slc37a2 G3PP|Slc37a1|cI-2|ci2 solute carrier family 37 (glycerol-3-phosphate transporter), member 2 protein-coding common_peak2_45_272_0.0723159743600128_8.12891512809986_0.388443223276854-3 chr8 119574459 119575326 + 0.388443223276854 NA promoter-TSS (NM_026648) promoter-TSS (NM_026648) 308 NM_175185 72552 Mm.36756 NM_175185 ENSMUSG00000034189 Hsdl1 2700067E09Rik hydroxysteroid dehydrogenase like 1 protein-coding common_peak1_64_458_-0.0654358230809109_8.80963243187335_0.388428007768028 chr6 88074863 88075805 + 0.388428007768028 NA Intergenic Intergenic -9139 NM_133933 103963 Mm.188544 NM_133933 ENSMUSG00000030062 Rpn1 AU018702|D6Wsu137e|Rpn-1 ribophorin I protein-coding common_peak2_27_145_0.0967401911379078_7.23819465444897_0.388341184142861 chr8 19161701 19162332 + 0.388341184142861 NA Intergenic Intergenic 4129 NM_153115 78128 Mm.229357 NM_153115 ENSMUSG00000079842 Spag11a 9230111C08Rik|Bin1b|EP2Q|EP2e|Spag11 sperm associated antigen 11A protein-coding common_peak1_27_145_0.0967401911379078_7.23819465444897_0.388341184142861 chr11 107418789 107419428 + 0.388341184142861 NA intron (NM_145823, intron 1 of 9) ID_B1|SINE|B4 51612 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_172_1423_0.0334771005261505_10.4924719812295_0.388192510156803 chr2 11552179 11554585 + 0.388192510156803 NA intron (NM_001177758, intron 1 of 14) MIR|SINE|MIR 547 NM_001177758 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding common_peak2_70_509_-0.0611938910118415_8.96375649135294_0.388068784381048 chr5 21353537 21355877 + 0.388068784381048 NA intron (NM_029195, intron 2 of 18) intron (NM_029195, intron 2 of 18) -17966 NM_008013 14190 Mm.292100 NM_008013 ENSMUSG00000039899 Fgl2 AI385601|musfiblp fibrinogen-like protein 2 protein-coding common_peak1_70_509_-0.0611938910118415_8.96375649135294_0.388068784381048 chr3 96057738 96058776 + 0.388068784381048 NA 5' UTR (NM_013841, exon 1 of 15) 5' UTR (NM_013841, exon 1 of 15) 198 NM_013841 22365 Mm.263185 NM_013841 ENSMUSG00000015747 Vps45 AI462172|AW554165|mVps45 vacuolar protein sorting 45 protein-coding common_peak2_91_649_0.047389518550407_9.36799066719102_0.387991914602721 chr5 129886581 129887884 + 0.387991914602721 NA exon (NM_024166, exon 1 of 4) exon (NM_024166, exon 1 of 4) 238 NM_024166 14004 Mm.30133 NM_024166 ENSMUSG00000070493 Chchd2 AL033347|Etohi6 coiled-coil-helix-coiled-coil-helix domain containing 2 protein-coding common_peak2_61_396_0.0602993187777052_8.66314485653181_0.387896042337631 chrX 129749024 129751295 + 0.387896042337631 NA intron (NM_172493, intron 1 of 26) CpG 417 NM_172493 54004 Mm.10763 NM_017398 ENSMUSG00000034480 Diaph2 Dia3|Diap2|Drf2|E430022I22Rik diaphanous related formin 2 protein-coding common_peak2_186_1639_-0.0325624254034214_10.6631988868037_0.387837092522775 chr11 69091955 69094900 + 0.387837092522775 NA Intergenic Intergenic 4899 NM_009497 22318 Mm.28643 NM_009497 ENSMUSG00000020894 Vamp2 Syb-2|Syb2|sybII vesicle-associated membrane protein 2 protein-coding common_peak1_34_218_-0.0933413450776399_7.72811638706235_0.387799884118619 chr17 63863157 63863962 + 0.387799884118619 NA promoter-TSS (NM_001037997) promoter-TSS (NM_001037997) -422 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding common_peak1_18_106_-0.141102783004256_6.67091559489902_0.387703360961311-3 chr15 83426360 83426931 + 0.387703360961311 NA intron (NM_001159509, intron 1 of 10) intron (NM_001159509, intron 1 of 10) 6205 NM_011862 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak2_18_106_-0.141102783004256_6.67091559489902_0.387703360961311 chr3 84337277 84337852 + 0.387703360961311 NA Intergenic MIR|SINE|MIR -32789 NM_001271726 80890 Mm.44876 NM_030706 ENSMUSG00000027993 Trim2 mKIAA0517|narf tripartite motif-containing 2 protein-coding common_peak1_18_106_-0.141102783004256_6.67091559489902_0.387703360961311 chr10 118050415 118050902 + 0.387703360961311 NA Intergenic Intergenic -91129 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding unique_peak2_18_106_-0.141102783004256_6.67091559489902_0.387703360961311 chr13 5778507 5779443 + 0.387703360961311 NA Intergenic Intergenic 79117 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_18_106_-0.141102783004256_6.67091559489902_0.387703360961311-2 chr11 53771792 53772298 + 0.387703360961311 NA intron (NM_001159396, intron 2 of 9) RSINE1|SINE|B4 1572 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak1_263_2404_0.0253357025625451_11.2444890299387_0.387675259611833 chr8 69715707 69717074 + 0.387675259611833 NA promoter-TSS (NM_181274) promoter-TSS (NM_181274) 96 NM_181274 66869 Mm.334581 NM_181274 ENSMUSG00000054648 Zfp869 1200003I07Rik zinc finger protein 869 protein-coding common_peak1_85_596_0.0507523601754993_9.24696330135255_0.387607440369967 chr17 32993024 32994001 + 0.387607440369967 NA intron (NM_001045559, intron 1 of 3) intron (NM_001045559, intron 1 of 3) 373 NM_001045559 240067 Mm.246667 NM_199020 ENSMUSG00000053390 Zfp952 BC057593|C920016K16Rik zinc finger protein 952 protein-coding common_peak1_59_416_-0.0686348296606027_8.66958615861436_0.387469112387656 chr15 59648297 59649407 + 0.387469112387656 NA 5' UTR (NM_144549, exon 1 of 3) 5' UTR (NM_144549, exon 1 of 3) 198 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles pseudokinase 1 protein-coding common_peak2_165_1352_0.0341720563781678_10.4190321521656_0.387430826913519 chr9 118101309 118104955 + 0.387430826913519 NA intron (NM_026442, intron 2 of 3) intron (NM_026442, intron 2 of 3) 47064 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding common_peak2_89_677_-0.0523505143853562_9.37896620594367_0.387338491543846 chr13 92094025 92096260 + 0.387338491543846 NA Intergenic Intergenic -107100 NM_009027 19418 Mm.248630 NM_009027 ENSMUSG00000021708 Rasgrf2 6330417G04Rik|AW048350|Grf2|Ras-GRF2 RAS protein-specific guanine nucleotide-releasing factor 2 protein-coding common_peak1_226_1994_0.0277717158780231_10.9760588890487_0.387286523994861 chr16 19759854 19762067 + 0.387286523994861 NA intron (NM_054052, intron 2 of 3) intron (NM_054052, intron 2 of 3) 726 NM_001159407 108105 Mm.33935 NM_054052 ENSMUSG00000022686 B3gnt5 beta3GnT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding unique_peak2_73_494_0.0551112474307942_8.97884033868237_0.387205190427651 chr2 166682622 166686174 + 0.387205190427651 NA intron (NR_105783, intron 2 of 2) intron (NR_105783, intron 2 of 2) 11680 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak2_73_494_0.0551112474307942_8.97884033868237_0.387205190427651 chr10 88416856 88419227 + 0.387205190427651 NA intron (NM_001004164, intron 5 of 20) intron (NM_001004164, intron 5 of 20) 38629 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak1_73_494_0.0551112474307942_8.97884033868237_0.387205190427651 chr1 51933710 51934758 + 0.387205190427651 NA Intergenic Intergenic -18256 NM_001161817 17912 Mm.3390 NM_010863 ENSMUSG00000018417 Myo1b AA406997|MIH-L|MMIa myosin IB protein-coding common_peak1_232_2141_-0.0286312038764081_11.0504271628121_0.387101723604875 chr2 26501888 26504642 + 0.387101723604875 NA promoter-TSS (NR_132655) promoter-TSS (NR_132655) 557 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak2_65_466_-0.0633464808624247_8.83560549927845_0.386896165579657 chr10 127603729 127605953 + 0.386896165579657 NA intron (NM_008512, intron 6 of 88) intron (NM_008512, intron 6 of 88) 16307 NM_008512 16971 Mm.271854 NM_008512 ENSMUSG00000040249 Lrp1 A2mr|AI316852|CD91|Lrp|b2b1554Clo low density lipoprotein receptor-related protein 1 protein-coding common_peak2_54_374_-0.0694557669973275_8.51601890188458_0.386886644871118 chr1 58805815 58807370 + 0.386886644871118 NA intron (NM_001277926, intron 2 of 9) (TTCTC)n|Simple_repeat|Simple_repeat 4090 NM_001080126 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding common_peak1_54_374_-0.0694557669973275_8.51601890188458_0.386886644871118 chr1 36274389 36275514 + 0.386886644871118 NA Intergenic Intergenic -1526 NM_153408 214854 Mm.389110 NM_153408 ENSMUSG00000047180 Neurl3 2010300P06Rik|Lincr neuralized E3 ubiquitin protein ligase 3 protein-coding common_peak1_54_374_-0.0694557669973275_8.51601890188458_0.386886644871118-2 chr5 31202392 31202954 + 0.386886644871118 NA promoter-TSS (NM_175311) promoter-TSS (NM_175311) -370 NM_175311 101023 Mm.45033 NM_175311 ENSMUSG00000043059 Zfp513 AW990386|D430028M17Rik|Znf513 zinc finger protein 513 protein-coding common_peak1_16_77_0.118134042111923_6.34446923991821_0.386851461318747-3 chr11 100859333 100859650 + 0.386851461318747 NA promoter-TSS (NM_001164062) promoter-TSS (NM_001164062) 140 NM_011488 20850 Mm.277403 NM_011488 ENSMUSG00000004043 Stat5a AA959963|STAT5 signal transducer and activator of transcription 5A protein-coding common_peak1_16_77_0.118134042111923_6.34446923991821_0.386851461318747-4 chr13 13393346 13393816 + 0.386851461318747 NA promoter-TSS (NM_031999) promoter-TSS (NM_031999) 43 NM_031999 83924 Mm.379269 NM_031999 ENSMUSG00000021306 Gpr137b AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1 G protein-coupled receptor 137B protein-coding common_peak1_16_77_0.118134042111923_6.34446923991821_0.386851461318747-2 chr10 63382338 63382703 + 0.386851461318747 NA promoter-TSS (NM_001253685) promoter-TSS (NM_001253685) 77 NM_001253685 30045 Mm.32550 NM_013888 ENSMUSG00000036764 Dnajc12 Jdp1|mJDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding common_peak1_16_77_0.118134042111923_6.34446923991821_0.386851461318747-5 chr15 101241046 101241476 + 0.386851461318747 NA Intergenic Intergenic -16075 NR_045328 380977 Mm.399924 NR_045326 ENSMUSG00000097915 A330009N23Rik - RIKEN cDNA A330009N23 gene ncRNA unique_peak2_16_77_0.118134042111923_6.34446923991821_0.386851461318747 chr14 46818291 46818915 + 0.386851461318747 NA intron (NM_022023, intron 1 of 6) B1_Mus2|SINE|Alu 3639 NM_022023 63985 Mm.87312 NM_022023 ENSMUSG00000062014 Gmfb 3110001H22Rik|3110001O16Rik|AI851627|C79176|D14Ertd630e glia maturation factor, beta protein-coding common_peak1_16_77_0.118134042111923_6.34446923991821_0.386851461318747 chr1 54917112 54917639 + 0.386851461318747 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 9012 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_16_77_0.118134042111923_6.34446923991821_0.386851461318747-6 chr6 30353280 30353740 + 0.386851461318747 NA Intergenic B1_Mus2|SINE|Alu 37500 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding common_peak2_96_741_-0.0499370132573933_9.51030686999211_0.386820434551831 chr2 61711173 61712620 + 0.386820434551831 NA intron (NM_021526, intron 1 of 11) CpG 202 NM_021526 59029 Mm.218198 NM_021526 ENSMUSG00000026914 Psmd14 2610312C03Rik|3200001M20Rik|AA986732|Pad1|Poh1|rpm11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 protein-coding common_peak2_150_1202_0.0360994578094758_10.2504706560808_0.386731899552996 chr4 141720648 141724167 + 0.386731899552996 NA intron (NM_001017966, intron 1 of 9) intron (NM_001017966, intron 1 of 9) 1012 NM_001017966 68817 Mm.393721 NM_001017966 ENSMUSG00000078515 Ddi2 1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698 DNA-damage inducible protein 2 protein-coding common_peak1_77_570_-0.0577911745686261_9.12845134807853_0.38661315485594 chr19 60225822 60226722 + 0.38661315485594 NA 5' UTR (NM_029648, exon 1 of 8) 5' UTR (NM_029648, exon 1 of 8) 425 NM_029648 76539 Mm.290183 NM_029648 ENSMUSG00000057858 Fam204a 2310065H12Rik|2610015K05Rik|D19Ertd737e family with sequence similarity 204, member A protein-coding common_peak1_77_570_-0.0577911745686261_9.12845134807853_0.38661315485594-2 chr4 145019232 145020422 + 0.38661315485594 NA intron (NM_001276465, intron 66 of 69) intron (NM_001276465, intron 66 of 69) 126690 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak2_39_256_-0.0878780103767465_7.96168554400551_0.386504829085214 chr11 101464755 101466390 + 0.386504829085214 NA intron (NM_012037, intron 1 of 5) intron (NM_012037, intron 1 of 5) 627 NM_012037 26949 Mm.29210 NM_012037 ENSMUSG00000034993 Vat1 VAT-1 vesicle amine transport 1 protein-coding common_peak2_30_189_-0.103173403596641_7.51826890653263_0.386480289109852 chr8 122906029 122907415 + 0.386480289109852 NA intron (NR_037865, intron 4 of 13) intron (NR_037865, intron 4 of 13) 58348 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding unique_peak2_30_189_-0.103173403596641_7.51826890653263_0.386480289109852 chr5 92000051 92001598 + 0.386480289109852 NA Intergenic Intergenic 13351 NM_001177577 381651 Mm.332494 NM_001177577 ENSMUSG00000096035 Gm1045 Gm1045-a|Gm1045-b predicted gene 1045 protein-coding common_peak2_215_1953_-0.0301702515697215_10.9171296261835_0.38644156865314 chr17 33759176 33761436 + 0.38644156865314 NA 5' UTR (NM_008997, exon 1 of 5) 5' UTR (NM_008997, exon 1 of 5) 180 NM_008997 19326 Mm.387587 NM_008997 ENSMUSG00000077450 Rab11b A730055L17Rik RAB11B, member RAS oncogene family protein-coding common_peak1_86_605_0.0496238471929011_9.2679859070694_0.386342374694826 chr4 126096091 126097256 + 0.386342374694826 NA promoter-TSS (NM_138721) promoter-TSS (NM_138721) 20 NM_138721 116748 Mm.41865 NM_138721 ENSMUSG00000050188 Lsm10 - U7 snRNP-specific Sm-like protein LSM10 protein-coding common_peak2_44_294_-0.0783925066845725_8.16537489090692_0.386306978318747 chr4 156235443 156236552 + 0.386306978318747 NA promoter-TSS (NM_021303) promoter-TSS (NM_021303) -13 NM_021303 57741 Mm.423051 NM_021303 ENSMUSG00000095567 Noc2l AA410003|AF155546|NIR NOC2 like nucleolar associated transcriptional repressor protein-coding common_peak1_44_294_-0.0783925066845725_8.16537489090692_0.386306978318747 chr16 32645270 32646117 + 0.386306978318747 NA intron (NM_016788, intron 1 of 15) intron (NM_016788, intron 1 of 15) 1050 NM_016788 51789 Mm.251115 NM_016788 ENSMUSG00000022791 Tnk2 Ack|Ack-1|Ack1|Cdgip|Pyk1 tyrosine kinase, non-receptor, 2 protein-coding common_peak1_49_334_-0.0753897820223948_8.35032239433394_0.386298821480126 chr1 80637088 80637927 + 0.386298821480126 NA intron (NM_001285927, intron 2 of 55) intron (NM_001285927, intron 2 of 55) 27845 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak2_51_318_0.0646209420624189_8.34972308479608_0.386298821479929 chr17 35821567 35823205 + 0.386298821479929 NA promoter-TSS (NM_008027) promoter-TSS (NM_008027) 673 NM_133662 15937 Mm.25613 NM_133662 ENSMUSG00000003541 Ier3 AI663993|IEX-1|cI-3|gly96 immediate early response 3 protein-coding unique_peak2_26_160_-0.108709311275022_7.27656222247711_0.386079731936961 chr18 67808806 67809936 + 0.386079731936961 NA intron (NM_027556, intron 5 of 45) B1F2|SINE|Alu 9264 NM_027556 70799 Mm.30857 NM_027556 ENSMUSG00000024542 Cep192 4631422C13Rik|D430014P18Rik centrosomal protein 192 protein-coding common_peak2_46_280_0.0687047672050909_8.16877870382347_0.386010295295061-2 chr8 69183650 69184889 + 0.386010295295061 NA Intergenic Intergenic -24777 NM_001013379 234358 Mm.334577 NM_001013379 ENSMUSG00000059897 Zfp930 - zinc finger protein 930 protein-coding common_peak2_46_280_0.0687047672050909_8.16877870382347_0.386010295295061 chr6 70830433 70831844 + 0.386010295295061 NA Intergenic Intergenic -13377 NM_010121 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak1_22_133_-0.127628386364262_7.00227499727564_0.385874721478047-3 chr16 10775408 10775948 + 0.385874721478047 NA Intergenic B1_Mur4|SINE|Alu 9858 NM_009896 12703 Mm.130 NM_009896 ENSMUSG00000038037 Socs1 Cish1|Cish7|JAB|SOCS-1|SSI-1 suppressor of cytokine signaling 1 protein-coding unique_peak2_22_133_-0.127628386364262_7.00227499727564_0.385874721478047 chr11 75245379 75246412 + 0.385874721478047 NA intron (NM_177708, intron 1 of 1) intron (NM_177708, intron 1 of 1) 51902 NM_177708 237847 Mm.82661 NM_177708 ENSMUSG00000045287 Rtn4rl1 Ngr3|Ngrh2|Ngrl2 reticulon 4 receptor-like 1 protein-coding unique_peak2_22_133_-0.127628386364262_7.00227499727564_0.385874721478047-2 chr19 5084698 5085715 + 0.385874721478047 NA intron (NM_001001885, intron 1 of 1) intron (NM_001001885, intron 1 of 1) 271 NM_001001885 381199 Mm.329663 NM_001001885 ENSMUSG00000061451 Tmem151a AW125688|Gm961|Tmem151 transmembrane protein 151A protein-coding common_peak1_22_133_-0.127628386364262_7.00227499727564_0.385874721478047-4 chr9 109056410 109056896 + 0.385874721478047 NA exon (NM_001284332, exon 6 of 6) exon (NM_001284332, exon 6 of 6) 1787 NM_026381 66940 Mm.196533 NM_025858 ENSMUSG00000025647 Shisa5 2310008D10Rik|6430628I05Rik|Scotin|mShisa5 shisa family member 5 protein-coding common_peak1_22_133_-0.127628386364262_7.00227499727564_0.385874721478047-2 chr14 66229113 66229713 + 0.385874721478047 NA intron (NM_172498, intron 1 of 29) MTD|LTR|ERVL-MaLR -15861 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_22_133_-0.127628386364262_7.00227499727564_0.385874721478047 chr12 102349165 102349741 + 0.385874721478047 NA intron (NM_001161365, intron 3 of 9) MLT1B|LTR|ERVL-MaLR 65812 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_60_424_-0.0667995799780918_8.69791924103602_0.385802552286584 chr18 75018570 75019293 + 0.385802552286584 NA 5' UTR (NM_027727, exon 1 of 17) 5' UTR (NM_027727, exon 1 of 17) 159 NM_027727 69190 Mm.173826 NM_027727 ENSMUSG00000035765 Dym 1810041M12Rik|4933427L07Rik|C030019K18Rik dymeclin protein-coding common_peak2_326_3232_-0.0227810404431636_11.6472672719045_0.385668848295221 chr2 18063250 18066698 + 0.385668848295221 NA intron (NM_001252560, intron 1 of 22) CpG 389 NM_001252561 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding common_peak2_84_632_-0.0544198415758501_9.27885176864042_0.385655407387087 chr11 103965758 103967567 + 0.385655407387087 NA promoter-TSS (NM_007477) promoter-TSS (NM_007477) -63 NM_001304574 11841 Mm.5061 NM_007477 ENSMUSG00000062421 Arf2 - ADP-ribosylation factor 2 protein-coding common_peak1_84_632_-0.0544198415758501_9.27885176864042_0.385655407387087 chr11 43433603 43434329 + 0.385655407387087 NA intron (NM_198936, intron 1 of 15) CpG 235 NM_198936 193116 Mm.28200 NM_148673 ENSMUSG00000020409 Slu7 AU018913|D11Ertd730e|D3Bwg0878e SLU7 splicing factor homolog (S. cerevisiae) protein-coding common_peak1_337_3365_-0.0223933016141835_11.7056228105229_0.385594370935859 chr4 134922590 134925462 + 0.385594370935859 NA exon (NM_023665, exon 2 of 5) exon (NM_023665, exon 2 of 5) 401 NM_023665 27981 Mm.331964 NM_023665 ENSMUSG00000037266 Rsrp1 2700043I21Rik|D4Ucla2|D4Wsu53e arginine/serine rich protein 1 protein-coding common_peak1_190_1682_-0.0324479553431551_10.7005954836584_0.385593791618426 chr3 108145233 108146662 + 0.385593791618426 NA exon (NM_010306, exon 1 of 9) exon (NM_010306, exon 1 of 9) 205 NM_010306 14679 Mm.271703 NM_010306 ENSMUSG00000000001 Gnai3 AI158965|AW537698|Galphai3|Gnai-3 guanine nucleotide binding protein (G protein), alpha inhibiting 3 protein-coding common_peak2_111_881_-0.0448454731668839_9.76221210897408_0.385590492875962 chr9 44334522 44336069 + 0.385590492875962 NA 3' UTR (NM_010436, exon 1 of 1) 3' UTR (NM_010436, exon 1 of 1) 580 NM_010436 15270 Mm.245931 NM_010436 ENSMUSG00000049932 H2afx AW228881|H2A.X|H2ax|Hist5-2ax|gammaH2ax H2A histone family, member X protein-coding common_peak1_32_179_0.0854668513312049_7.53458652199528_0.385556176265759 chr15 28179228 28179944 + 0.385556176265759 NA Intergenic Intergenic -24180 NM_133365 110082 Mm.248464 NM_133365 ENSMUSG00000022262 Dnah5 AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b601Clo|mKIAA1603 dynein, axonemal, heavy chain 5 protein-coding unique_peak2_32_179_0.0854668513312049_7.53458652199528_0.385556176265759 chr10 68524274 68525323 + 0.385556176265759 NA intron (NM_028491, intron 3 of 7) intron (NM_028491, intron 3 of 7) 17077 NM_028491 73287 Mm.141830 NM_028491 ENSMUSG00000019945 1700040L02Rik - RIKEN cDNA 1700040L02 gene protein-coding common_peak2_66_474_-0.0612400030685869_8.86116370168402_0.385417099911937 chr11 79961591 79963336 + 0.385417099911937 NA promoter-TSS (NM_144826) promoter-TSS (NM_144826) -76 NM_144826 216987 Mm.274961 NM_144826 ENSMUSG00000035575 Utp6 4732497O03Rik|HCA66 UTP6 small subunit processome component protein-coding common_peak1_114_857_0.0417325534722846_9.76570011423569_0.385396086441646 chr10 59896096 59897757 + 0.385396086441646 NA intron (NM_019965, intron 8 of 8) intron (NM_019965, intron 8 of 8) 17335 NM_019965 56709 Mm.103610 NM_019965 ENSMUSG00000020109 Dnajb12 Dj10|mDj10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding common_peak1_72_526_-0.0593401252515857_9.01198908901142_0.385200862186886 chr3 62506362 62507273 + 0.385200862186886 NA exon (NM_028136, exon 1 of 25) exon (NM_028136, exon 1 of 25) 171 NM_028136 72162 Mm.224233 NM_028136 ENSMUSG00000027770 Dhx36 2810407E23Rik|AI452301|AU022184|Ddx36|mKIAA1488 DEAH (Asp-Glu-Ala-His) box polypeptide 36 protein-coding common_peak2_191_1692_-0.0317538562444781_10.7094893297734_0.385088612019221 chr11 11738356 11743033 + 0.385088612019221 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 50517 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_55_382_-0.0680235207206756_8.54718882156462_0.385047359440914 chr1 92641301 92642071 + 0.385047359440914 NA non-coding (NR_028108, exon 1 of 3) non-coding (NR_028108, exon 1 of 3) 262 NR_028108 66915 Mm.30179 NM_001163425 ENSMUSG00000073616 Myeov2 1110002M09Rik|Cops9 myeloma overexpressed 2 protein-coding common_peak2_35_225_-0.0888812893561646_7.77573831773711_0.385019236701203 chr7 24133557 24134825 + 0.385019236701203 NA promoter-TSS (NM_019941) promoter-TSS (NM_019941) 28 NM_019941 56525 Mm.295595 NM_019941 ENSMUSG00000047603 Zfp235 0610030O19Rik|AI428448 zinc finger protein 235 protein-coding common_peak1_13_60_0.129215101268684_5.99534488819723_0.384853687557072-2 chr7 80786699 80787033 + 0.384853687557072 NA intron (NM_016721, intron 2 of 37) intron (NM_016721, intron 2 of 37) 16465 NM_016721 29875 Mm.207619 NM_016721 ENSMUSG00000030536 Iqgap1 AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051 IQ motif containing GTPase activating protein 1 protein-coding common_peak1_13_60_0.129215101268684_5.99534488819723_0.384853687557072 chr12 108761849 108762228 + 0.384853687557072 NA Intergenic Intergenic -31273 NM_009537 22632 Mm.3868 NM_009537 ENSMUSG00000021264 Yy1 AW488674|NF-E1 YY1 transcription factor protein-coding common_peak1_119_958_-0.0435059500477148_9.88363402999427_0.384833981456374 chr2 71366644 71368061 + 0.384833981456374 NA intron (NM_172436, intron 1 of 17) intron (NM_172436, intron 1 of 17) 202 NM_172436 78830 Mm.30928 NM_172436 ENSMUSG00000027010 Slc25a12 2610002D09Rik|AI839531|B230107K20Rik|BB129864 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 protein-coding common_peak1_15_87_-0.163178355512129_6.37784244088123_0.384781851000355 chr5 108001184 108001582 + 0.384781851000355 NA Intergenic Intergenic -14306 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding unique_peak2_15_87_-0.163178355512129_6.37784244088123_0.384781851000355 chr9 48521107 48522002 + 0.384781851000355 NA Intergenic MMVL30-int|LTR|ERV1 26211 NM_001004191 434402 Mm.386950 NM_001004191 ENSMUSG00000042293 Gm5617 EG434402 predicted gene 5617 protein-coding common_peak1_98_759_-0.0484011445167827_9.54565503607256_0.384753015010859 chr7 12965199 12966592 + 0.384753015010859 NA promoter-TSS (NM_178732) promoter-TSS (NM_178732) 31 NM_178732 243834 Mm.133086 NM_178732 ENSMUSG00000004500 Zfp324 A930002M05|D430030K24Rik|ZF5128 zinc finger protein 324 protein-coding common_peak2_112_890_-0.0437621233495218_9.77740055984716_0.384722647364722 chr10 17771429 17773499 + 0.384722647364722 NA Intergenic Intergenic -23755 NM_138628 378431 Mm.283493 NM_138628 ENSMUSG00000039891 Txlnb 2310001N14Rik|Mdp77 taxilin beta protein-coding common_peak2_81_562_0.051064464171553_9.16252334416601_0.384669561326518 chr3 62506207 62507552 + 0.384669561326518 NA exon (NM_028136, exon 1 of 25) exon (NM_028136, exon 1 of 25) 109 NM_028136 72162 Mm.224233 NM_028136 ENSMUSG00000027770 Dhx36 2810407E23Rik|AI452301|AU022184|Ddx36|mKIAA1488 DEAH (Asp-Glu-Ala-His) box polypeptide 36 protein-coding common_peak2_158_1346_-0.0356578538659047_10.3777052085293_0.384625536430364 chr17 13142805 13146304 + 0.384625536430364 NA Intergenic RMER10A|LTR|ERVL -12763 NM_199252 381058 Mm.390935 NM_199252 ENSMUSG00000067049 Unc93a Unc93l|unc-93A unc-93 homolog A (C. elegans) protein-coding common_peak1_63_412_0.0594799140784339_8.71973792845866_0.384594206904801 chrX 37126807 37127698 + 0.384594206904801 NA exon (NM_025937, exon 1 of 9) exon (NM_025937, exon 1 of 9) 489 NM_025937 67050 Mm.55422 NM_025937 ENSMUSG00000016409 Nkap 2610020O08Rik|AA987160|AI849147|AL024236 NFKB activating protein protein-coding common_peak2_52_325_0.067013611212035_8.3822349598371_0.384506035030945 chr19 38223348 38224863 + 0.384506035030945 NA promoter-TSS (NM_001081075) promoter-TSS (NM_001081075) 27 NM_001081075 70567 Mm.30607 NM_001081075 ENSMUSG00000054237 Fra10ac1 5730455O13Rik|AI448293 FRA10AC1 homolog (human) protein-coding common_peak2_28_152_0.091275471819916_7.30302557860261_0.38445907154446 chr2 94178411 94179062 + 0.38445907154446 NA Intergenic Intergenic -20827 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding common_peak1_28_152_0.091275471819916_7.30302557860261_0.38445907154446 chr9 96416066 96416593 + 0.38445907154446 NA Intergenic Intergenic -52030 NM_007502 11933 Mm.424 NM_007502 ENSMUSG00000032412 Atp1b3 AA409958|AI664000|AW212096 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding unique_peak2_28_152_0.091275471819916_7.30302557860261_0.38445907154446 chr17 84230655 84231991 + 0.38445907154446 NA intron (NM_183021, intron 31 of 37) intron (NM_183021, intron 31 of 37) -43376 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_115_867_0.0403367044408025_9.78171958466488_0.384437310713569 chr1 74505922 74507121 + 0.384437310713569 NA promoter-TSS (NM_001310662) promoter-TSS (NM_001310662) 461 NM_021383 58184 Mm.291708 NM_021383 ENSMUSG00000026174 Cnot9 2610007F23Rik|AI593551|Fl10|Rqcd1 CCR4-NOT transcription complex, subunit 9 protein-coding unique_peak2_20_101_0.105049301827003_6.724949992885_0.384415132402501-2 chr9 124110911 124111842 + 0.384415132402501 NA Intergenic ORR1C1-int|LTR|ERVL-MaLR 9193 NM_009915 12772 Mm.6272 NM_009915 ENSMUSG00000049103 Ccr2 Cc-ckr-2|Ccr2a|Ccr2b|Ckr2|Ckr2a|Ckr2b|Cmkbr2|mJe-r chemokine (C-C motif) receptor 2 protein-coding unique_peak2_20_101_0.105049301827003_6.724949992885_0.384415132402501 chr13 101713499 101714601 + 0.384415132402501 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) -21420 NM_001024955 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_20_101_0.105049301827003_6.724949992885_0.384415132402501 chr13 13378747 13379131 + 0.384415132402501 NA intron (NM_031999, intron 1 of 6) Lx6|LINE|L1 14685 NM_031999 83924 Mm.379269 NM_031999 ENSMUSG00000021306 Gpr137b AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1 G protein-coupled receptor 137B protein-coding common_peak2_75_511_0.0535888257696033_9.0267944128848_0.384392980657671 chr2 166677946 166681029 + 0.384392980657671 NA intron (NR_105783, intron 2 of 2) intron (NR_105783, intron 2 of 2) 6769 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_50_342_-0.0743939890453564_8.38486777165014_0.384256058885407 chr13 52988766 52989750 + 0.384256058885407 NA Intergenic ORR1E|LTR|ERVL-MaLR -8219 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak2_61_432_-0.064928698806062_8.72575886532369_0.384199044472555 chr13 52988554 52990183 + 0.384199044472555 NA Intergenic ORR1E|LTR|ERVL-MaLR -8329 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak2_61_432_-0.064928698806062_8.72575886532369_0.384199044472555-2 chr13 63239394 63241020 + 0.384199044472555 NA intron (NM_001289924, intron 12 of 16) CpG 178 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding common_peak1_40_263_-0.0829508542930286_8.00291869221194_0.384167035641719 chr2 130501152 130501779 + 0.384167035641719 NA intron (NM_008980, intron 1 of 21) B1_Mus2|SINE|Alu 51187 NM_001163688 19262 Mm.224246 NM_008980 ENSMUSG00000027303 Ptpra Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha protein tyrosine phosphatase, receptor type, A protein-coding common_peak1_220_2007_-0.029002377901767_10.9570423649999_0.384120876824276 chr1 150392176 150394081 + 0.384120876824276 NA promoter-TSS (NM_001077237) promoter-TSS (NM_001077237) -73 NM_145511 226499 Mm.222093 NM_145511 ENSMUSG00000006010 BC003331 1810053E15Rik|Odr4|odr-4 cDNA sequence BC003331 protein-coding common_peak2_138_1085_0.0371763929882398_10.1033965842985_0.384079619825159-2 chr8 120100547 120102156 + 0.384079619825159 NA 5' UTR (NM_133967, exon 1 of 8) 5' UTR (NM_133967, exon 1 of 8) 121 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding common_peak2_138_1085_0.0371763929882398_10.1033965842985_0.384079619825159 chr1 180255362 180257241 + 0.384079619825159 NA promoter-TSS (NM_001128605) promoter-TSS (NM_001128605) -1 NM_001128605 19165 Mm.330850 NM_011183 ENSMUSG00000010609 Psen2 ALG-3|Ad4h|Alg3|PS-2|PS2|Psnl2|STM2 presenilin 2 protein-coding common_peak1_47_287_0.0704627778361395_8.20515639036038_0.38398994786132 chr10 78351482 78352509 + 0.38398994786132 NA promoter-TSS (NM_053014) promoter-TSS (NM_053014) -295 NM_053014 28169 Mm.141230 NM_053014 ENSMUSG00000001211 Agpat3 AW061257|AW493985|D10Jhu12e|lpaat3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding common_peak1_45_302_-0.0781008681930864_8.20412354937641_0.38398994786132 chr11 32556154 32557078 + 0.38398994786132 NA intron (NM_009288, intron 2 of 18) intron (NM_009288, intron 2 of 18) 23350 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding common_peak1_92_704_-0.0506627263985653_9.43614808408687_0.383973079284193 chrX 159757146 159758352 + 0.383973079284193 NA intron (NM_021389, intron 1 of 16) intron (NM_021389, intron 1 of 16) 49148 NR_110970 58194 Mm.286495 NM_021389 ENSMUSG00000040990 Sh3kbp1 1200007H22Rik|1700125L08Rik|5830464D22Rik|AI447724|Cin85|IN85|Ruk|Seta SH3-domain kinase binding protein 1 protein-coding common_peak1_24_126_0.0973305053642184_7.03734993945428_0.383930757016279-2 chr7 78913204 78913750 + 0.383930757016279 NA promoter-TSS (NM_001113527) promoter-TSS (NM_001113527) 53 NM_001291220 57444 Mm.322843 NM_020583 ENSMUSG00000039236 Isg20 1600023I01Rik|2010107M23Rik|20kDa|DnaQL|HEM45 interferon-stimulated protein protein-coding unique_peak2_24_126_0.0973305053642184_7.03734993945428_0.383930757016279 chr2 45089187 45090334 + 0.383930757016279 NA intron (NM_001289521, intron 1 of 8) intron (NM_001289521, intron 1 of 8) 20517 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding unique_peak2_24_126_0.0973305053642184_7.03734993945428_0.383930757016279-2 chr9 120775712 120776688 + 0.383930757016279 NA Intergenic B4A|SINE|B4 139050 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA common_peak1_24_126_0.0973305053642184_7.03734993945428_0.383930757016279 chr7 30403090 30403671 + 0.383930757016279 NA Intergenic Intergenic -10408 NM_011662 22177 Mm.46301 NM_011662 ENSMUSG00000030579 Tyrobp DAP12|KARAP|Ly83 TYRO protein tyrosine kinase binding protein protein-coding common_peak2_123_942_0.0387928664319226_9.90051039389106_0.383869140484488 chr8 47532297 47534459 + 0.383869140484488 NA promoter-TSS (NM_203507) promoter-TSS (NM_203507) 92 NM_177240 320714 Mm.39461 NM_177240 ENSMUSG00000038102 Trappc11 AW558465|D030016E14Rik|R75422 trafficking protein particle complex 11 protein-coding common_peak2_176_1533_-0.0334218463078244_10.566371844349_0.383822697415722 chr12 25141293 25144457 + 0.383822697415722 NA Intergenic Intergenic 13701 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_106_833_-0.0449331540888895_9.68143699640022_0.383737049850932 chr9 21545514 21547965 + 0.383737049850932 NA promoter-TSS (NM_021531) promoter-TSS (NM_021531) -155 NM_021531 59035 Mm.178115 NM_021531 ENSMUSG00000032185 Carm1 Prmt4 coactivator-associated arginine methyltransferase 1 protein-coding common_peak1_168_1449_-0.0340233363728863_10.4848255167159_0.383570510346326 chr6 131292528 131294273 + 0.383570510346326 NA promoter-TSS (NM_025564) promoter-TSS (NM_025564) -156 NM_025564 66441 Mm.46623 NM_025564 ENSMUSG00000030188 Magohb 2010012C16Rik|Mago|Magoh|Magoh-rs1 mago homolog B, exon junction complex core component protein-coding common_peak1_12_68_-0.179715523323592_6.01866669511637_0.383552807395299 chr1 80636059 80636455 + 0.383552807395299 NA intron (NM_001285927, intron 2 of 55) intron (NM_001285927, intron 2 of 55) 29095 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak1_12_68_-0.179715523323592_6.01866669511637_0.383552807395299-2 chr17 5174152 5174478 + 0.383552807395299 NA intron (NM_001085355, intron 4 of 19) intron (NM_001085355, intron 4 of 19) 179241 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak1_194_1724_-0.0313316100667134_10.7367148415195_0.383511837987016 chr9 88719011 88720402 + 0.383511837987016 NA promoter-TSS (NM_001128601) promoter-TSS (NM_001128601) 92 NM_001128601 100039707 Mm.347377 NM_001128601 ENSMUSG00000079427 Mthfsl Gm2382 5, 10-methenyltetrahydrofolate synthetase-like protein-coding common_peak2_95_685_0.0449353242919948_9.44453242831881_0.383496693676379 chr16 58727728 58728876 + 0.383496693676379 NA intron (NR_045517, intron 1 of 4) CpG 392 NM_001252451 224250 Mm.29482 NM_171826 ENSMUSG00000022744 Cldnd1 1110019C08Rik|AA407103|AI849195|AW489850|Cldn25 claudin domain containing 1 protein-coding common_peak2_86_649_-0.0514980772499634_9.31854686929083_0.383400271759963-2 chr8 117125976 117128390 + 0.383400271759963 NA intron (NM_001163028, intron 7 of 11) B3|SINE|B2 -30952 NM_001081151 209239 Mm.132992 NM_001081151 ENSMUSG00000052557 Gan A330045G18|gigaxonin giant axonal neuropathy protein-coding common_peak2_86_649_-0.0514980772499634_9.31854686929083_0.383400271759963 chr10 41977868 41979873 + 0.383400271759963 NA intron (NM_001034858, intron 6 of 17) intron (NM_001034858, intron 6 of 17) 39512 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak2_31_196_-0.0991862451448524_7.57245869688395_0.383331053212869 chr6 142752094 142753308 + 0.383331053212869 NA Intergenic Intergenic -3985 NM_009908 12764 Mm.3820 NM_009908 ENSMUSG00000030282 Cmas AW208911|CMPNeu5Ac|D6Bwg0250e cytidine monophospho-N-acetylneuraminic acid synthetase protein-coding common_peak1_102_748_0.0427259753179889_9.57018489611774_0.383320790666101 chr7 45509790 45510753 + 0.383320790666101 NA intron (NM_001163662, intron 1 of 12) CpG 137 NM_008749 18220 Mm.258923 NM_008749 ENSMUSG00000030824 Nucb1 B230337F23Rik|C77483|Calnuc|MTEST82|Nucb nucleobindin 1 protein-coding common_peak2_56_390_-0.0665260777571799_8.57776175842876_0.383285232683303 chr19 29323100 29324612 + 0.383285232683303 NA intron (NM_013754, intron 1 of 1) intron (NM_013754, intron 1 of 1) 1462 NM_013754 27356 Mm.306511 NM_013754 ENSMUSG00000050957 Insl6 RIF1 insulin-like 6 protein-coding common_peak1_121_977_-0.0425588927189047_9.91241120859278_0.383181276744305 chr13 113607264 113608949 + 0.383181276744305 NA intron (NM_130796, intron 1 of 1) B1_Mus2|SINE|Alu 10458 NM_130796 170625 Mm.33721 NM_130796 ENSMUSG00000042364 Snx18 Snag1 sorting nexin 18 protein-coding common_peak1_76_520_0.0515819784945588_9.05093055152579_0.382977213326309 chr11 59847628 59848513 + 0.382977213326309 NA promoter-TSS (NM_134029) promoter-TSS (NM_134029) -3 NM_134029 103850 Mm.41761 NM_134029 ENSMUSG00000032615 Nt5m 2010013E09Rik|AI846937|dNT-2 5',3'-nucleotidase, mitochondrial protein-coding common_peak2_76_520_0.0515819784945588_9.05093055152579_0.382977213326309 chr9 54611504 54613706 + 0.382977213326309 NA intron (NM_053178, intron 11 of 13) B1_Mur4|SINE|Alu 26094 NM_029573 67834 Mm.279195 NM_029573 ENSMUSG00000032279 Idh3a 1110003P10Rik|1500012E04Rik|AA407078|AI316514 isocitrate dehydrogenase 3 (NAD+) alpha protein-coding common_peak1_19_112_-0.129044734784411_6.75565659502298_0.382862865257914-3 chr4 46578226 46578665 + 0.382862865257914 NA intron (NM_001164804, intron 1 of 11) MMTV-int|LTR|ERVK -12005 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak1_19_112_-0.129044734784411_6.75565659502298_0.382862865257914-4 chr5 111330090 111330590 + 0.382862865257914 NA promoter-TSS (NM_001301666) promoter-TSS (NM_001301666) -357 NM_001301644 56305 Mm.200516 NM_019640 ENSMUSG00000050017 Pitpnb PI-TP-beta phosphatidylinositol transfer protein, beta protein-coding unique_peak2_19_112_-0.129044734784411_6.75565659502298_0.382862865257914 chr13 52874157 52874884 + 0.382862865257914 NA intron (NM_016709, intron 6 of 9) intron (NM_016709, intron 6 of 9) 55157 NM_016709 11992 Mm.252034 NM_016709 ENSMUSG00000021460 Auh C77140|W91705 AU RNA binding protein/enoyl-coenzyme A hydratase protein-coding common_peak1_19_112_-0.129044734784411_6.75565659502298_0.382862865257914 chr11 32549426 32549888 + 0.382862865257914 NA intron (NM_009288, intron 1 of 18) intron (NM_009288, intron 1 of 18) 16391 NM_009288 20868 Mm.8235 NM_009288 ENSMUSG00000020272 Stk10 Gek1|Lok|mKIAA4026 serine/threonine kinase 10 protein-coding unique_peak2_19_112_-0.129044734784411_6.75565659502298_0.382862865257914-2 chr4 155694034 155694936 + 0.382862865257914 NA 5' UTR (NM_178699, exon 1 of 1) 5' UTR (NM_178699, exon 1 of 1) 143 NM_178699 230991 Mm.29083 NM_178699 ENSMUSG00000074738 Fndc10 B930041F14Rik|MNCb-3966 fibronectin type III domain containing 10 protein-coding common_peak1_19_112_-0.129044734784411_6.75565659502298_0.382862865257914-2 chr13 114918292 114918869 + 0.382862865257914 NA intron (NM_008396, intron 1 of 29) Tigger7|DNA|TcMar-Tigger 13461 NM_008396 16398 Mm.5007 NM_008396 ENSMUSG00000015533 Itga2 CD49B|DX5 integrin alpha 2 protein-coding common_peak2_89_632_0.046729259322646_9.32942631908966_0.382759693652652 chr17 46673521 46675150 + 0.382759693652652 NA promoter-TSS (NM_144857) promoter-TSS (NM_144857) -80 NM_144857 224823 Mm.45101 NM_144857 ENSMUSG00000023971 Rrp36 - ribosomal RNA processing 36 homolog (S. cerevisiae) protein-coding common_peak2_208_1801_0.0283623207112047_10.8295644561691_0.382722684629572 chr5 122130428 122132674 + 0.382722684629572 NA intron (NM_183307, intron 2 of 12) intron (NM_183307, intron 2 of 12) 3342 NM_001289811 330188 Mm.386907 NM_183307 ENSMUSG00000043036 Ccdc63 4921511C16Rik coiled-coil domain containing 63 protein-coding common_peak2_266_2439_0.0244874524672234_11.2649091586839_0.382621208441058 chr1 166000304 166004071 + 0.382621208441058 NA intron (NM_011137, intron 1 of 16) CpG 447 NM_198932 18986 Mm.245261 NM_011137 ENSMUSG00000026565 Pou2f1 2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1 POU domain, class 2, transcription factor 1 protein-coding common_peak1_53_333_0.065115585551899_8.41626208525_0.382547289138575 chr6 86570985 86571986 + 0.382547289138575 NA Intergenic Intergenic 44084 NR_037961 72012 Mm.349174 NR_037960 ENSMUSG00000097048 1600020E01Rik - RIKEN cDNA 1600020E01 gene ncRNA common_peak2_74_543_-0.0573131329606724_9.05880627477_0.382515917666514-2 chr9 98296312 98297883 + 0.382515917666514 NA intron (NM_144533, intron 1 of 4) intron (NM_144533, intron 1 of 4) 514 NM_144533 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak2_74_543_-0.0573131329606724_9.05880627477_0.382515917666514 chr3 129552016 129554297 + 0.382515917666514 NA intron (NM_130450, intron 2 of 4) intron (NM_130450, intron 2 of 4) 20770 NM_130450 170439 Mm.314113 NM_130450 ENSMUSG00000041220 Elovl6 C77826|FAE|LCE ELOVL family member 6, elongation of long chain fatty acids (yeast) protein-coding common_peak1_74_543_-0.0573131329606724_9.05880627477_0.382515917666514 chr2 156143807 156144951 + 0.382515917666514 NA promoter-TSS (NM_010911) promoter-TSS (NM_010911) 146 NM_025946 67067 Mm.371623 NM_025946 ENSMUSG00000067847 Romo1 2010100O12Rik|AI853864 reactive oxygen species modulator 1 protein-coding common_peak1_417_4358_-0.019423560642899_12.0800697080325_0.382507820029663 chr9 63714515 63720110 + 0.382507820029663 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 40682 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_33_186_0.0832541122728907_7.58852151602408_0.382473469816527 chr10 81393294 81393916 + 0.382473469816527 NA intron (NM_001099917, intron 1 of 3) intron (NM_001099917, intron 1 of 3) 541 NM_001099917 72273 Mm.253147 NM_001099917 ENSMUSG00000078439 Smim24 2210404O07Rik small integral membrane protein 24 protein-coding common_peak2_27_167_-0.105752672760835_7.33944108639834_0.382391907126123 chr11 101278372 101279141 + 0.382391907126123 NA promoter-TSS (NM_026562) promoter-TSS (NM_026562) 192 NM_026618 52469 Mm.52 NM_026618 ENSMUSG00000017188 Coa3 1810033A19Rik|Ccdc56|D11Ertd99e|HSPC009 cytochrome C oxidase assembly factor 3 protein-coding common_peak2_27_167_-0.105752672760835_7.33944108639834_0.382391907126123-2 chr7 16204073 16204945 + 0.382391907126123 NA intron (NM_027883, intron 9 of 16) PB1D10|SINE|Alu 17484 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak1_51_350_-0.0732936644772728_8.41868038806592_0.382308890926659 chr3 106484777 106485944 + 0.382308890926659 NA promoter-TSS (NM_028110) promoter-TSS (NM_028110) 553 NR_033207 69206 Mm.14816 NM_001033146 ENSMUSG00000091575 2010016I18Rik - RIKEN cDNA 2010016I18 gene ncRNA common_peak2_519_5687_-0.0169542957274516_12.4652286017557_0.382155837416844 chr12 110484324 110489381 + 0.382155837416844 NA intron (NM_012023, intron 1 of 13) intron (NM_012023, intron 1 of 13) 1113 NM_012023 26931 Mm.240396 NM_012023 ENSMUSG00000017843 Ppp2r5c 2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044 protein phosphatase 2, regulatory subunit B', gamma protein-coding common_peak1_360_3645_-0.0211744576250972_11.8215116172266_0.382153398630472 chr15 77840203 77842339 + 0.382153398630472 NA intron (NM_022410, intron 1 of 40) CpG 904 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding unique_peak2_23_139_-0.115507548852872_7.07152924251853_0.382073897817893 chr3 8981847 8983061 + 0.382073897817893 NA intron (NM_009412, intron 1 of 5) intron (NM_009412, intron 1 of 5) -18400 NM_001025261 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak1_133_1037_0.0375652829781981_10.038373369847_0.382023559849831 chr11 75732481 75734029 + 0.382023559849831 NA intron (NM_009536, intron 1 of 5) CpG 368 NM_009536 22627 Mm.234700 NM_009536 ENSMUSG00000020849 Ywhae AU019196 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide protein-coding common_peak1_248_2237_0.0256460643452385_11.140817353149_0.381878174837086 chr10 82858690 82861150 + 0.381878174837086 NA promoter-TSS (NM_001042514) promoter-TSS (NM_001042514) -421 NM_001042514 50493 Mm.210155 NM_015762 ENSMUSG00000020250 Txnrd1 TR|TR1|TrxR1 thioredoxin reductase 1 protein-coding common_peak1_141_1115_0.0356505452041862_10.1419465844313_0.381873663671304 chr8 124313227 124315376 + 0.381873663671304 NA intron (NM_139272, intron 3 of 15) intron (NM_139272, intron 3 of 15) 82907 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_101_786_-0.0459367371936743_9.59725145691065_0.381832206295987 chr11 114967705 114970086 + 0.381832206295987 NA Intergenic Intergenic -8478 NM_199225 387565 Mm.351450 NM_199225 ENSMUSG00000058728 Cd300c Clm6 CD300C molecule protein-coding common_peak1_46_310_-0.0776396827045858_8.24195092877831_0.381795509811482 chr7 45770520 45771299 + 0.381795509811482 NA Intergenic ID_B1|SINE|B4 -11354 NM_017465 54200 Mm.271634 NM_017465 ENSMUSG00000003271 Sult2b1 AI326997|BB173635|ST2B1|SULT2B sulfotransferase family, cytosolic, 2B, member 1 protein-coding common_peak2_48_295_0.0674228712817353_8.24316480126982_0.381795509811482 chr10 44454303 44456258 + 0.381795509811482 NA intron (NM_007548, intron 2 of 6) intron (NM_007548, intron 2 of 6) 3468 NM_007548 12142 Mm.4800 NM_007548 ENSMUSG00000038151 Prdm1 Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo PR domain containing 1, with ZNF domain protein-coding common_peak1_38_221_0.0785275832577543_7.83367965797898_0.381695662172208-2 chr5 138622761 138623412 + 0.381695662172208 NA intron (NM_183025, intron 1 of 3) intron (NM_183025, intron 1 of 3) 227 NM_183025 243308 Mm.36612 NM_183025 ENSMUSG00000056014 A430033K04Rik C86988 RIKEN cDNA A430033K04 gene protein-coding common_peak1_38_221_0.0785275832577543_7.83367965797898_0.381695662172208 chr2 135811779 135812374 + 0.381695662172208 NA intron (NM_013829, intron 2 of 36) intron (NM_013829, intron 2 of 36) 70246 NM_013829 18798 Mm.38009 NM_013829 ENSMUSG00000039943 Plcb4 A930039J07Rik|AI854601|C230058B11Rik phospholipase C, beta 4 protein-coding common_peak1_38_221_0.0785275832577543_7.83367965797898_0.381695662172208-3 chr7 105751720 105752256 + 0.381695662172208 NA exon (NM_009906, exon 2 of 13) exon (NM_009906, exon 2 of 13) 219 NM_009906 12751 Mm.20837 NM_009906 ENSMUSG00000030894 Tpp1 Cln2|LPIC|TPP-1|TPP-I tripeptidyl peptidase I protein-coding unique_peak2_38_221_0.0785275832577543_7.83367965797898_0.381695662172208 chr11 21113862 21115642 + 0.381695662172208 NA intron (NM_023324, intron 1 of 6) intron (NM_023324, intron 1 of 6) 23428 NM_023324 67245 Mm.28957 NM_023324 ENSMUSG00000020134 Peli1 2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e pellino 1 protein-coding common_peak2_41_271_-0.0833758862654843_8.0457748981176_0.381647131499841 chr1 171287409 171288034 + 0.381647131499841 NA TTS (NM_025388) TTS (NM_025388) 240 NM_013919 30941 Mm.27510 NM_013919 ENSMUSG00000053483 Usp21 ESTM28|Usp16|Usp23|W53272 ubiquitin specific peptidase 21 protein-coding common_peak1_90_641_0.0459155555977446_9.34938726492117_0.381631415166 chr19 53142746 53143430 + 0.381631415166 NA promoter-TSS (NM_013758) promoter-TSS (NM_013758) 332 NM_001164100 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak2_57_398_-0.0649693105234199_8.60776028096064_0.381595508716273 chr4 62561055 62562895 + 0.381595508716273 NA intron (NM_019492, intron 1 of 19) IMPB_01|Satellite|Satellite 2128 NM_019492 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_104_766_0.0424974631738859_9.60433149908988_0.381416737731455 chr12 81970806 81972265 + 0.381416737731455 NA intron (NM_018814, intron 20 of 35) intron (NM_018814, intron 20 of 35) 111505 NM_018814 54604 Mm.86584 NM_018814 ENSMUSG00000021140 Pcnx 2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnx1|Pcnxl1 pecanex homolog (Drosophila) protein-coding common_peak1_88_667_-0.0506859237098638_9.35836133061912_0.381139896883613 chr10 18007169 18008265 + 0.381139896883613 NA Intergenic RLTR12D|LTR|ERVK 15535 NM_028440 73112 Mm.276041 NM_028440 ENSMUSG00000078453 Abracl 1700028I04Rik|3110003A17Rik ABRA C-terminal like protein-coding common_peak1_17_83_0.112367939093907_6.44850139232571_0.380928408457998-7 chrX 101641143 101641412 + 0.380928408457998 NA intron (NM_001290535, intron 1 of 21) intron (NM_001290535, intron 1 of 21) 1059 NM_001290535 108155 Mm.487332 NM_139144 ENSMUSG00000034160 Ogt 1110038P24Rik|4831420N21Rik|AI115525|Ogtl O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) protein-coding common_peak1_17_83_0.112367939093907_6.44850139232571_0.380928408457998-6 chr9 96704740 96705284 + 0.380928408457998 NA intron (NM_175537, intron 2 of 2) intron (NM_175537, intron 2 of 2) 26663 NM_175537 245007 Mm.485954 NM_175537 ENSMUSG00000040433 Zbtb38 A930014K01Rik|CIBZ zinc finger and BTB domain containing 38 protein-coding common_peak1_17_83_0.112367939093907_6.44850139232571_0.380928408457998-2 chr18 65189615 65190056 + 0.380928408457998 NA intron (NM_031881, intron 18 of 29) intron (NM_031881, intron 18 of 29) -59026 NR_029600 387231 NR_029600 ENSMUSG00000065402 Mir122 Mir122a|Mirn122a|mir-122|mmu-mir-122 microRNA 122 ncRNA common_peak1_17_83_0.112367939093907_6.44850139232571_0.380928408457998 chr1 180401395 180401840 + 0.380928408457998 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -71068 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_17_83_0.112367939093907_6.44850139232571_0.380928408457998-4 chr5 141062680 141063095 + 0.380928408457998 NA Intergenic Intergenic -62291 NM_175362 108723 Mm.46187 NM_175362 ENSMUSG00000036526 Card11 0610008L17Rik|2410011D02Rik|BIMP3|CARMA1 caspase recruitment domain family, member 11 protein-coding common_peak2_17_83_0.112367939093907_6.44850139232571_0.380928408457998-2 chr11 46453947 46454756 + 0.380928408457998 NA promoter-TSS (NM_134250) promoter-TSS (NM_134250) -580 NM_134250 171285 Mm.72168 NM_134250 ENSMUSG00000020399 Havcr2 TIM-3|Tim3|Timd3 hepatitis A virus cellular receptor 2 protein-coding common_peak1_17_83_0.112367939093907_6.44850139232571_0.380928408457998-3 chr5 64969684 64969981 + 0.380928408457998 NA promoter-TSS (NR_030577) promoter-TSS (NR_030577) -243 NM_026667 68303 Mm.258545 NM_026667 ENSMUSG00000029185 Fam114a1 1190001N04Rik|9130005N14Rik|Noxp20 family with sequence similarity 114, member A1 protein-coding common_peak2_17_83_0.112367939093907_6.44850139232571_0.380928408457998 chr10 57743553 57744140 + 0.380928408457998 NA Intergenic Intergenic -41077 NM_021272 12140 Mm.3644 NM_021272 ENSMUSG00000019874 Fabp7 B-FABP|BFABP|Blbp|MRG fatty acid binding protein 7, brain protein-coding common_peak1_17_83_0.112367939093907_6.44850139232571_0.380928408457998-5 chr8 22701264 22701761 + 0.380928408457998 NA intron (NM_001159774, intron 2 of 21) Lx8b|LINE|L1 5071 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak1_29_159_0.0867283377103405_7.36529226374253_0.380907544830624 chr17 3396583 3397226 + 0.380907544830624 NA promoter-TSS (NM_011878) promoter-TSS (NM_011878) -303 NM_011878 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak1_29_159_0.0867283377103405_7.36529226374253_0.380907544830624-2 chr3 103865369 103865992 + 0.380907544830624 NA intron (NR_104070, intron 3 of 22) intron (NR_104070, intron 3 of 22) 5403 NM_008979 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding common_peak2_95_731_-0.048699747819235_9.49134996437443_0.38086028191026 chr11 48787145 48789210 + 0.38086028191026 NA Intergenic ORR1E|LTR|ERVL-MaLR -12183 NM_008143 14694 Mm.5305 NM_008143 ENSMUSG00000020372 Rack1 AL033335|GB-like|Gnb2-rs1|Gnb2l1|p205 receptor for activated C kinase 1 protein-coding common_peak1_95_731_-0.048699747819235_9.49134996437443_0.38086028191026 chr10 17771892 17772962 + 0.38086028191026 NA Intergenic Intergenic -23792 NM_138628 378431 Mm.283493 NM_138628 ENSMUSG00000039891 Txlnb 2310001N14Rik|Mdp77 taxilin beta protein-coding common_peak2_365_3706_-0.0207701214325429_11.8456513391029_0.380808667485167 chr15 97468058 97471929 + 0.380808667485167 NA Intergenic Intergenic -222706 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding common_peak2_102_796_-0.0468880302137329_9.61499189888361_0.380801484837765 chr14 55721218 55723052 + 0.380801484837765 NA promoter-TSS (NM_019519) promoter-TSS (NM_019519) 41 NM_019519 56187 Mm.87216 NM_019519 ENSMUSG00000040472 Rabggta gm Rab geranylgeranyl transferase, a subunit protein-coding common_peak2_54_341_0.0634385035000182_8.44957176663591_0.380678366650993 chr3 135485083 135486460 + 0.380678366650993 NA exon (NM_027288, exon 1 of 17) exon (NM_027288, exon 1 of 17) 160 NM_027288 110173 Mm.280536 NM_027288 ENSMUSG00000028164 Manba 2410030O07Rik|B930014J03Rik|Bmn mannosidase, beta A, lysosomal protein-coding common_peak2_140_1163_-0.03760973932898_10.1660704732438_0.380536169550782 chr13 24830553 24832622 + 0.380536169550782 NA promoter-TSS (NM_019551) promoter-TSS (NM_019551) -72 NM_019551 56196 Mm.427162 NM_019551 ENSMUSG00000035958 Tdp2 D13Ertd656e|Ttrap tyrosyl-DNA phosphodiesterase 2 protein-coding common_peak1_143_1135_0.034775175927054_10.1671347074682_0.380467000003743 chr13 104177797 104179471 + 0.380467000003743 NA promoter-TSS (NM_030731) promoter-TSS (NM_030731) -168 NM_001093760 66975 Mm.272541 NM_025879 ENSMUSG00000021711 Trappc13 2410002O22Rik|2610524F24Rik|AI451892|AU017229 trafficking protein particle complex 13 protein-coding common_peak2_98_712_0.0436961973702754_9.49960636512903_0.380418888521989 chr7 27859818 27861544 + 0.380418888521989 NA promoter-TSS (NM_001024726) promoter-TSS (NM_001024726) 96 NM_001024726 545938 Mm.458180 NM_001024726 ENSMUSG00000020420 Zfp607a 4732475C15Rik|Zfp607 zinc finger protein 607A protein-coding unique_peak2_32_203_-0.0951053943106155_7.62487264481619_0.380405728694605 chr10 67727018 67728520 + 0.380405728694605 NA Intergenic B4A|SINE|B4 -178814 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak2_32_203_-0.0951053943106155_7.62487264481619_0.380405728694605 chr3 102714972 102715856 + 0.380405728694605 NA Intergenic Intergenic -19356 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding common_peak1_117_938_-0.042842631425593_9.85356003194098_0.380379383531035 chr16 43708859 43710824 + 0.380379383531035 NA Intergenic (T)n|Simple_repeat|Simple_repeat -45657 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak2_210_1896_-0.0289046242725135_10.8750516512752_0.380198939353423 chr6 122267386 122272347 + 0.380198939353423 NA TTS (NM_016970) TTS (NM_016970) 12967 NM_016970 50928 Mm.20434 NM_016970 ENSMUSG00000030114 Klrg1 2F1-Ag|MAFA|MAFA-L killer cell lectin-like receptor subfamily G, member 1 protein-coding common_peak1_89_676_-0.0502210748240088_9.37790148616299_0.380055603151665 chr4 132260275 132261414 + 0.380055603151665 NA intron (NM_001122992, intron 1 of 10) intron (NM_001122992, intron 1 of 10) 705 NM_020273 56809 Mm.103489 NM_020273 ENSMUSG00000028901 Gmeb1 1110050A04Rik|AI256615|AI481278 glucocorticoid modulatory element binding protein 1 protein-coding common_peak2_76_560_-0.055135419835727_9.10428925069093_0.379996979871013 chr10 111972495 111973602 + 0.379996979871013 NA intron (NM_178610, intron 1 of 9) CpG 353 NM_178610 52705 Mm.34606 NM_178610 ENSMUSG00000063334 Krr1 2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding common_peak1_72_487_0.0515816888227416_8.95652818197426_0.379977566548829-2 chr18 56572437 56573704 + 0.379977566548829 NA promoter-TSS (NM_001127338) promoter-TSS (NM_001127338) -131 NM_001127338 110695 Mm.30250 NM_138600 ENSMUSG00000053644 Aldh7a1 Atq1|D18Wsu181e aldehyde dehydrogenase family 7, member A1 protein-coding common_peak1_72_487_0.0515816888227416_8.95652818197426_0.379977566548829 chr10 123075717 123076475 + 0.379977566548829 NA 5' UTR (NM_001163024, exon 1 of 35) 5' UTR (NM_001163024, exon 1 of 35) 409 NM_001163024 67074 Mm.169924 NM_153395 ENSMUSG00000034602 Mon2 2610528O22Rik|AW495628|Sf21|mKIAA1040 MON2 homolog, regulator of endosome to Golgi trafficking protein-coding common_peak2_60_389_0.0571891372973621_8.63592488239829_0.379973814676066 chr8 4275192 4276604 + 0.379973814676066 NA promoter-TSS (NM_011592) promoter-TSS (NM_011592) 7 NM_011592 21856 Mm.195249 NM_011592 ENSMUSG00000002949 Timm44 0710005E20Rik|D8Ertd118e|Mimt44|Tim44 translocase of inner mitochondrial membrane 44 protein-coding common_peak1_21_107_0.104910240530483_6.80734262242871_0.379925531631896-2 chr15 85908622 85909137 + 0.379925531631896 NA intron (NM_009886, intron 24 of 34) intron (NM_009886, intron 24 of 34) 29552 NM_028063 72026 Mm.158211 NM_028063 ENSMUSG00000022386 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding common_peak1_21_107_0.104910240530483_6.80734262242871_0.379925531631896 chr1 87856526 87856956 + 0.379925531631896 NA intron (NM_177646, intron 1 of 29) ID_B1|SINE|B4 3454 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak1_136_1067_0.0356416248473046_10.0785167441112_0.379775692386213 chr17 36041822 36042941 + 0.379775692386213 NA promoter-TSS (NM_001034909) promoter-TSS (NM_001034909) 311 NM_010399 15051 Mm.195061 NM_010399 H2-T9 H-2T9 histocompatibility 2, T region locus 9 protein-coding common_peak1_25_133_0.0893320541831599_7.11075521754935_0.379723755049011-3 chr11 54214621 54215072 + 0.379723755049011 NA Intergenic Intergenic -1558 NR_045506 71056 Mm.56332 NR_045506 ENSMUSG00000086209 4933405E24Rik - RIKEN cDNA 4933405E24 gene ncRNA common_peak1_25_133_0.0893320541831599_7.11075521754935_0.379723755049011-2 chr1 180196092 180196638 + 0.379723755049011 NA promoter-TSS (NM_023341) promoter-TSS (NM_023341) -345 NM_023341 67426 Mm.38330 NM_023341 ENSMUSG00000026489 Coq8a 4632432J16Rik|AI462003|Adck3|Cabc1|mKIAA0451 coenzyme Q8A protein-coding common_peak1_25_133_0.0893320541831599_7.11075521754935_0.379723755049011 chr1 133363529 133364131 + 0.379723755049011 NA exon (NM_175443, exon 1 of 8) exon (NM_175443, exon 1 of 8) 258 NM_175443 214253 Mm.52111 NM_175443 ENSMUSG00000070644 Etnk2 4933417N20Rik|AI197444|EKI 2|Eki2|Tuc1 ethanolamine kinase 2 protein-coding common_peak1_25_133_0.0893320541831599_7.11075521754935_0.379723755049011-4 chr15 96707401 96707890 + 0.379723755049011 NA Intergenic MLT1F1|LTR|ERVL-MaLR -7947 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding common_peak1_25_133_0.0893320541831599_7.11075521754935_0.379723755049011-5 chr19 4222684 4223214 + 0.379723755049011 NA 3' UTR (NM_019952, exon 3 of 3) 3' UTR (NM_019952, exon 3 of 3) 8560 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak1_49_303_0.0646999898791556_8.28027750838316_0.379714184588037 chr14 8213943 8214895 + 0.379714184588037 NA promoter-TSS (NM_001305936) promoter-TSS (NM_001305936) -83 NM_001305936 71393 Mm.292712 NM_027782 ENSMUSG00000021752 Kctd6 5430433B02Rik|AU044285 potassium channel tetramerisation domain containing 6 protein-coding common_peak2_37_240_-0.0859128216467155_7.8699329254066_0.37962233999307-2 chr2 168472875 168473771 + 0.37962233999307 NA Intergenic Intergenic 117042 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding unique_peak2_37_240_-0.0859128216467155_7.8699329254066_0.37962233999307 chr8 119436540 119438018 + 0.37962233999307 NA 5' UTR (NM_027950, exon 1 of 6) 5' UTR (NM_027950, exon 1 of 6) 117 NM_027950 71839 Mm.272357 NM_027950 ENSMUSG00000074063 Osgin1 1700012B18Rik|Okl38 oxidative stress induced growth inhibitor 1 protein-coding common_peak2_37_240_-0.0859128216467155_7.8699329254066_0.37962233999307 chr16 4541356 4542477 + 0.37962233999307 NA Intergenic CpG 17804 NM_031182 83383 Mm.273210 NM_031182 ENSMUSG00000005718 Tfap4 AI642933|AP-4|D930048N17Rik|Tcfap4|bHLHc41 transcription factor AP4 protein-coding common_peak1_37_240_-0.0859128216467155_7.8699329254066_0.37962233999307-2 chr7 25132421 25132997 + 0.37962233999307 NA promoter-TSS (NM_001163554) promoter-TSS (NM_001163554) -249 NM_001163554 18987 Mm.76683 NM_011138 ENSMUSG00000008496 Pou2f2 Oct-2|Oct2a|Oct2b|Oct2c|Oct2d|Otf-2|Otf2 POU domain, class 2, transcription factor 2 protein-coding common_peak1_37_240_-0.0859128216467155_7.8699329254066_0.37962233999307 chr1 171287514 171287943 + 0.37962233999307 NA TTS (NM_025388) TTS (NM_025388) 233 NM_013919 30941 Mm.27510 NM_013919 ENSMUSG00000053483 Usp21 ESTM28|Usp16|Usp23|W53272 ubiquitin specific peptidase 21 protein-coding common_peak2_37_240_-0.0859128216467155_7.8699329254066_0.37962233999307-3 chr3 52457957 52459434 + 0.37962233999307 NA Intergenic Intergenic 190358 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak2_37_240_-0.0859128216467155_7.8699329254066_0.37962233999307-4 chr8 70131085 70132012 + 0.37962233999307 NA non-coding (NR_104434, exon 1 of 4) non-coding (NR_104434, exon 1 of 4) 221 NM_001025587 75692 Mm.161167 NM_001025586 ENSMUSG00000071078 Nr2c2ap 2310073E15Rik nuclear receptor 2C2-associated protein protein-coding common_peak2_118_947_-0.0416708786586142_9.86790780956895_0.379614725246977 chr2 25331813 25333520 + 0.379614725246977 NA promoter-TSS (NR_027448) promoter-TSS (NR_027448) -77 NM_001029983 227619 Mm.270798 NM_001029983 ENSMUSG00000036646 Man1b1 E430019H13Rik|ERMan1|Gm108|MANA-ER mannosidase, alpha, class 1B, member 1 protein-coding common_peak1_106_784_0.0424215755767836_9.63775963156738_0.379598807759919 chr10 52417483 52418550 + 0.379598807759919 NA exon (NM_030250, exon 1 of 5) exon (NM_030250, exon 1 of 5) 469 NM_030250 52014 Mm.199964 NM_030250 ENSMUSG00000023068 Nus1 1600027K07Rik|AU019165|AW538011|BC003223|D10Ertd438e NUS1 dehydrodolichyl diphosphate synthase subunit protein-coding common_peak2_254_2305_0.0245995663540057_11.1834765808288_0.379514029169995 chr14 27353263 27359071 + 0.379514029169995 NA intron (NM_001289687, intron 1 of 9) intron (NM_001289687, intron 1 of 9) -5222 NM_001289688 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak1_410_4158_0.0184511030417891_12.0312465211673_0.379500325375911 chr17 28206726 28210142 + 0.379500325375911 NA intron (NM_027185, intron 1 of 10) intron (NM_027185, intron 1 of 10) 656 NM_027185 23853 Mm.204731 NM_027185 ENSMUSG00000002257 Def6 2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6 differentially expressed in FDCP 6 protein-coding common_peak1_215_1877_0.0270631527448888_10.8885129240262_0.379447113211549 chr10 85184280 85185972 + 0.379447113211549 NA promoter-TSS (NM_007771) promoter-TSS (NM_007771) -72 NM_007771 12952 Mm.26237 NM_007771 ENSMUSG00000020038 Cry1 AU020726|AU021000|Phll1 cryptochrome 1 (photolyase-like) protein-coding common_peak2_121_924_0.0378222068296541_9.8722206588185_0.379363103751783 chr10 128564990 128566869 + 0.379363103751783 NA promoter-TSS (NM_011119) promoter-TSS (NM_011119) 5 NM_011119 18813 Mm.4742 NM_011119 ENSMUSG00000025364 Pa2g4 38kDa|AA672939|Ebp1|Plfap proliferation-associated 2G4 protein-coding unique_peak2_44_265_0.0708962020634427_8.09073053653291_0.37927550764772 chr15 103304582 103306099 + 0.37927550764772 NA Intergenic CpG 5098 NM_030720 80910 Mm.160369 NM_030720 ENSMUSG00000063234 Gpr84 EX33 G protein-coupled receptor 84 protein-coding unique_peak2_16_93_-0.151052590703466_6.47906255632591_0.37913171410037-2 chr2 79056179 79056867 + 0.37913171410037 NA Intergenic Intergenic 187476 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_16_93_-0.151052590703466_6.47906255632591_0.37913171410037-3 chr7 127024246 127024677 + 0.37913171410037 NA exon (NM_010772, exon 4 of 5) exon (NM_010772, exon 4 of 5) 2018 NM_010772 17188 Mm.378964 NM_010772 ENSMUSG00000030678 Maz MAZI|PUR1|Pur-1|SAF-1|SAF-2 MYC-associated zinc finger protein (purine-binding transcription factor) protein-coding common_peak1_16_93_-0.151052590703466_6.47906255632591_0.37913171410037 chr12 35534556 35534935 + 0.37913171410037 NA 5' UTR (NM_013464, exon 1 of 11) 5' UTR (NM_013464, exon 1 of 11) 244 NM_013464 11622 Mm.341377 NM_013464 ENSMUSG00000019256 Ahr Ah|Ahh|Ahre|In|bHLHe76 aryl-hydrocarbon receptor protein-coding unique_peak2_16_93_-0.151052590703466_6.47906255632591_0.37913171410037 chr11 78822932 78823704 + 0.37913171410037 NA Intergenic Intergenic -3277 NM_001076681 66274 Mm.258932 NM_001076681 ENSMUSG00000072640 Lyrm9 1810012P15Rik LYR motif containing 9 protein-coding common_peak1_16_93_-0.151052590703466_6.47906255632591_0.37913171410037-2 chr13 93815288 93815666 + 0.37913171410037 NA intron (NM_009712, intron 4 of 7) intron (NM_009712, intron 4 of 7) 24700 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak1_16_93_-0.151052590703466_6.47906255632591_0.37913171410037-4 chr8 84207977 84208479 + 0.37913171410037 NA promoter-TSS (NR_029740) promoter-TSS (NR_029740) -290 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA common_peak2_145_1155_0.0340056550713079_10.1919285100363_0.379108451726938 chr5 117356729 117358561 + 0.379108451726938 NA intron (NM_021539, intron 1 of 8) CpG 340 NM_021539 59043 Mm.28489 NM_021539 ENSMUSG00000029364 Wsb2 AA673511|Swip2|WSB-2 WD repeat and SOCS box-containing 2 protein-coding unique_peak2_28_174_-0.102547797319761_7.39993721317245_0.379010659802113 chr15 79323155 79324286 + 0.379010659802113 NA intron (NM_016915, intron 1 of 15) intron (NM_016915, intron 1 of 15) 4651 NM_016915 53357 Mm.155620 NM_016915 ENSMUSG00000042632 Pla2g6 BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta phospholipase A2, group VI protein-coding common_peak1_28_174_-0.102547797319761_7.39993721317245_0.379010659802113 chr9 118518640 118519273 + 0.379010659802113 NA intron (NM_018748, intron 2 of 23) intron (NM_018748, intron 2 of 23) 12638 NM_018748 54214 Mm.10409 NM_018748 ENSMUSG00000038708 Golga4 AI225887|AU019508|Olp-1 golgi autoantigen, golgin subfamily a, 4 protein-coding unique_peak2_39_229_0.0722564878727576_7.88161829488075_0.378954718787724-2 chr17 32035731 32037000 + 0.378954718787724 NA 5' UTR (NM_028244, exon 1 of 16) 5' UTR (NM_028244, exon 1 of 16) 203 NM_028244 72462 Mm.102761 NM_028244 ENSMUSG00000058392 Rrp1b 2600005C20Rik|D030064A17|Kiaa0179|mKIAA0179 ribosomal RNA processing 1 homolog B (S. cerevisiae) protein-coding unique_peak2_39_229_0.0722564878727576_7.88161829488075_0.378954718787724 chr1 161747928 161749531 + 0.378954718787724 NA Intergenic Intergenic 39766 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_242_2251_-0.0265145129340656_11.1237338556132_0.378896476886224 chr7 112022750 112025299 + 0.378896476886224 NA intron (NM_133758, intron 1 of 27) CpG 518 NM_177249 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding common_peak2_55_349_0.0619659493719524_8.48219408651831_0.378893226925114 chr13 95566578 95567879 + 0.378893226925114 NA Intergenic Intergenic -41988 NM_007974 14063 Mm.1614 NM_007974 ENSMUSG00000021678 F2rl1 Gpcr11|PAR-2|Par2 coagulation factor II (thrombin) receptor-like 1 protein-coding common_peak1_86_606_0.0472451244101713_9.26917526846077_0.378699552444216 chr8 120528083 120529781 + 0.378699552444216 NA intron (NM_198671, intron 1 of 15) ID_B1|SINE|B4 -6925 NM_001145897 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak2_227_2007_0.0261797879721151_10.9846334479368_0.378415289913961 chr10 122735861 122740430 + 0.378415289913961 NA intron (NM_176919, intron 1 of 8) GA-rich|Low_complexity|Low_complexity 58830 NR_106182 102466884 NR_106182 ENSMUSG00000099225 Mir8104 Gm27380|mmu-mir-8104 microRNA 8104 ncRNA common_peak1_67_446_0.052629862163565_8.8304459522651_0.3783490007718 chr12 73964222 73965057 + 0.3783490007718 NA exon (NM_178392, exon 1 of 10) exon (NM_178392, exon 1 of 10) 109 NM_178392 75627 Mm.25937 NM_178392 ENSMUSG00000021113 Snapc1 2700033G17Rik|AU015787 small nuclear RNA activating complex, polypeptide 1 protein-coding common_peak2_67_446_0.052629862163565_8.8304459522651_0.3783490007718 chr11 49996449 49998217 + 0.3783490007718 NA Intergenic ORR1F|LTR|ERVL-MaLR -27998 NM_021540 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak1_84_631_-0.0521389003246107_9.2777112980148_0.378198814357478-2 chr8 46162930 46164183 + 0.378198814357478 NA Intergenic CpG -6000 NM_025747 66756 Mm.133623 NM_025747 ENSMUSG00000031631 Cfap97 1110068E21Rik|4933411K20Rik|AW049273|Kiaa1430|mKIAA1430 cilia and flagella associated protein 97 protein-coding common_peak1_84_631_-0.0521389003246107_9.2777112980148_0.378198814357478 chr3 90231258 90232212 + 0.378198814357478 NA 5' UTR (NM_206924, exon 1 of 5) 5' UTR (NM_206924, exon 1 of 5) 138 NM_206924 23922 Mm.13912 NM_206924 ENSMUSG00000027937 Jtb Gm622 jumping translocation breakpoint protein-coding common_peak1_65_465_-0.0602538858070432_8.83405920175076_0.378179419503625 chr1 98131138 98132438 + 0.378179419503625 NA intron (NR_040439, intron 1 of 2) intron (NR_040439, intron 1 of 2) 321 NR_040439 69030 Mm.402692 NR_040439 ENSMUSG00000100182 1810006J02Rik - RIKEN cDNA 1810006J02 gene ncRNA common_peak1_24_146_-0.113657152699981_7.14284376848637_0.378048709724236 chr7 46059351 46059856 + 0.378048709724236 NA intron (NM_153057, intron 15 of 30) B3|SINE|B2 25907 NM_153057 211548 Mm.274811 NM_153057 ENSMUSG00000030835 Nomo1 D7Ertd156e|Nomo|pM5 nodal modulator 1 protein-coding common_peak2_228_2018_0.0260426994267_10.9924465450448_0.377997389571536 chr13 53063855 53067419 + 0.377997389571536 NA Intergenic URR1B|DNA|hAT-Charlie -84598 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_228_2018_0.0260426994267_10.9924465450448_0.377997389571536 chr12 99561447 99564463 + 0.377997389571536 NA Intergenic Intergenic 65019 NR_045288 73457 Mm.383439 NR_045288 ENSMUSG00000100211 1700064M15Rik - RIKEN cDNA 1700064M15 gene ncRNA common_peak1_80_555_0.0474010102693718_9.14264157785819_0.377900289321568 chr14 62331893 62332894 + 0.377900289321568 NA intron (NM_026001, intron 1 of 10) CpG 288 NM_026001 67153 Mm.26040 NM_026001 ENSMUSG00000021932 Rnaseh2b 1110019N06Rik|2610207P08Rik|Dleu8 ribonuclease H2, subunit B protein-coding common_peak2_147_1174_0.0345632321317613_10.2157266575182_0.377860185108968 chr9 33058590 33061768 + 0.377860185108968 NA Intergenic Intergenic -131213 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak1_20_119_-0.129415951810021_6.84218261970351_0.377857319997267 chr12 59206785 59207307 + 0.377857319997267 NA intron (NM_001033156, intron 1 of 3) intron (NM_001033156, intron 1 of 3) 12437 NM_001033156 70611 Mm.311026 NM_001033156 ENSMUSG00000035329 Fbxo33 5730501N20Rik|AI642135 F-box protein 33 protein-coding common_peak2_20_119_-0.129415951810021_6.84218261970351_0.377857319997267-2 chr4 84007212 84008076 + 0.377857319997267 NA Intergenic MTEa|LTR|ERVL-MaLR 37235 NR_130998 78238 Mm.243903 NR_130998 ENSMUSG00000085217 6030471H07Rik - RIKEN cDNA 6030471H07 gene ncRNA common_peak1_20_119_-0.129415951810021_6.84218261970351_0.377857319997267-3 chr4 62476307 62476931 + 0.377857319997267 NA Intergenic Intergenic -3448 NM_138653 192120 Mm.29808 NM_138653 ENSMUSG00000028392 Bspry - B-box and SPRY domain containing protein-coding common_peak1_20_119_-0.129415951810021_6.84218261970351_0.377857319997267-4 chr6 113691203 113691726 + 0.377857319997267 NA intron (NM_001113553, intron 11 of 11) B1_Mm|SINE|Alu -6035 NM_001033463 381801 Mm.333322 NM_001033463 ENSMUSG00000056952 Tatdn2 AI646012|mKIAA0218 TatD DNase domain containing 2 protein-coding common_peak1_20_119_-0.129415951810021_6.84218261970351_0.377857319997267-2 chr16 93778995 93779508 + 0.377857319997267 NA intron (NM_027293, intron 23 of 36) intron (NM_027293, intron 23 of 36) -52870 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak2_20_119_-0.129415951810021_6.84218261970351_0.377857319997267 chr11 116259170 116260125 + 0.377857319997267 NA intron (NM_146032, intron 8 of 15) intron (NM_146032, intron 8 of 15) 14570 NM_146032 217337 Mm.29655 NM_146032 ENSMUSG00000020780 Srp68 2610024I03Rik signal recognition particle 68 protein-coding unique_peak2_20_119_-0.129415951810021_6.84218261970351_0.377857319997267 chr2 45189129 45190009 + 0.377857319997267 NA Intergenic Lx7|LINE|L1 -76290 NM_015753 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak1_225_2061_-0.0276968080093507_10.9959802133634_0.377808923319859 chr14 105987407 105990074 + 0.377808923319859 NA Intergenic ORR1C1-int|LTR|ERVL-MaLR -91921 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty homolog 2 (Drosophila) protein-coding common_peak2_123_943_0.0372637777451779_9.90127493823443_0.377806177253641 chr17 47525794 47528489 + 0.377806177253641 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 22090 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak2_50_311_0.0622685582652078_8.31653649799485_0.37773744549641 chr11 29514303 29515471 + 0.37773744549641 NA intron (NM_001163454, intron 1 of 2) CpG 146 NM_026465 67939 Mm.251087 NM_026465 ENSMUSG00000032673 Prorsd1 2010316F05Rik|Ncrna00117|Prdxdd1 prolyl-tRNA synthetase domain containing 1 protein-coding common_peak1_139_1096_0.0353225264930526_10.1170090736497_0.377718261815991 chr8 110846030 110847572 + 0.377718261815991 NA promoter-TSS (NM_133953) promoter-TSS (NM_133953) 2 NM_133953 101943 Mm.236123 NM_133953 ENSMUSG00000033732 Sf3b3 1810061H24Rik|5730409A01Rik|AA409318|D8Ertd633e|RSE1|SAP130|mKIAA0017 splicing factor 3b, subunit 3 protein-coding common_peak1_33_210_-0.0909506165466585_7.67562388043386_0.377681251803539 chr1 74661663 74662316 + 0.377681251803539 NA intron (NM_001014974, intron 1 of 19) CpG 235 NM_001014974 67534 Mm.260714 NM_001014974 ENSMUSG00000033257 Ttll4 4632407P03Rik|AI451681|mKIAA0173 tubulin tyrosine ligase-like family, member 4 protein-coding common_peak1_33_210_-0.0909506165466585_7.67562388043386_0.377681251803539-2 chr15 78567577 78568365 + 0.377681251803539 NA intron (NM_009008, intron 2 of 6) intron (NM_009008, intron 2 of 6) 4812 NM_009008 19354 Mm.1972 NM_009008 ENSMUSG00000033220 Rac2 AI323801|AI452260 RAS-related C3 botulinum substrate 2 protein-coding common_peak1_14_66_0.115954930953576_6.12406665593456_0.377610692194725-4 chr6 90748414 90748876 + 0.377610692194725 NA intron (NM_001134384, intron 1 of 13) intron (NM_001134384, intron 1 of 13) -32116 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding unique_peak2_14_66_0.115954930953576_6.12406665593456_0.377610692194725-3 chr6 127371852 127372374 + 0.377610692194725 NA Intergenic Intergenic -64146 NR_073373 232386 Mm.257367 NR_073373 ENSMUSG00000107153 Gm38404 D130058E03 predicted gene, 38404 ncRNA common_peak1_14_66_0.115954930953576_6.12406665593456_0.377610692194725 chr12 3365394 3365784 + 0.377610692194725 NA 5' UTR (NM_008445, exon 1 of 8) 5' UTR (NM_008445, exon 1 of 8) 457 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding unique_peak2_14_66_0.115954930953576_6.12406665593456_0.377610692194725 chr14 50956046 50956632 + 0.377610692194725 NA intron (NM_001123371, intron 1 of 5) intron (NM_001123371, intron 1 of 5) 198 NM_001123371 667034 Mm.482171 NM_001123371 ENSMUSG00000068417 Pnp2 - purine-nucleoside phosphorylase 2 protein-coding unique_peak2_14_66_0.115954930953576_6.12406665593456_0.377610692194725-2 chr5 107177492 107178226 + 0.377610692194725 NA exon (NM_011578, exon 4 of 17) exon (NM_011578, exon 4 of 17) 111736 NM_011578 21814 Mm.200775 NM_011578 ENSMUSG00000029287 Tgfbr3 1110036H20Rik|AU015626|AW215636|TBRIII transforming growth factor, beta receptor III protein-coding common_peak1_14_66_0.115954930953576_6.12406665593456_0.377610692194725-5 chr8 94409270 94409571 + 0.377610692194725 NA Intergenic Intergenic 22920 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak1_14_66_0.115954930953576_6.12406665593456_0.377610692194725-2 chr15 98881504 98881910 + 0.377610692194725 NA promoter-TSS (NM_026967) promoter-TSS (NM_026967) -293 NM_026967 69159 Mm.259708 NM_026967 ENSMUSG00000023755 Rhebl1 1810036J22Rik|Rheb2 Ras homolog enriched in brain like 1 protein-coding common_peak1_14_66_0.115954930953576_6.12406665593456_0.377610692194725-3 chr3 108721794 108722208 + 0.377610692194725 NA intron (NM_029522, intron 1 of 14) CpG 298 NM_029522 76123 Mm.226941 NM_029522 ENSMUSG00000027883 Gpsm2 6230410J09Rik|LGN|Pins G-protein signalling modulator 2 (AGS3-like, C. elegans) protein-coding common_peak1_287_2767_-0.0234936210186341_11.4228814171274_0.377605871655948 chr11 17006310 17009403 + 0.377605871655948 NA intron (NM_019549, intron 1 of 9) intron (NM_019549, intron 1 of 9) 862 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding common_peak1_113_899_-0.0426701604805064_9.79244611097678_0.377579078116061 chr11 79992479 79994110 + 0.377579078116061 NA 5' UTR (NM_199196, exon 1 of 16) 5' UTR (NM_199196, exon 1 of 16) 188 NM_199196 52615 Mm.283410 NM_199196 ENSMUSG00000017548 Suz12 2610028O16Rik|AI195385|AU016842|AW536442|D11Ertd530e|mKIAA0160 suppressor of zeste 12 homolog (Drosophila) protein-coding common_peak1_188_1658_-0.0303544948507977_10.6809209235305_0.377515888620718 chr6 145248958 145250918 + 0.377515888620718 NA promoter-TSS (NR_045598) promoter-TSS (NR_045598) 293 NM_021284 16653 Mm.383182 NM_021284 ENSMUSG00000030265 Kras AI929937|K-Ras|K-Ras 2|K-ras|Ki-ras|Kras-2|Kras2|c-K-ras|c-Ki-ras|p21B|ras Kirsten rat sarcoma viral oncogene homolog protein-coding common_peak1_179_1563_-0.0316215373700093_10.5952140286223_0.377485809440729 chr16 4212713 4214660 + 0.377485809440729 NA promoter-TSS (NM_001025432) promoter-TSS (NM_001025432) -282 NM_001025432 12914 Mm.132238 NM_001025432 ENSMUSG00000022521 Crebbp AW558298|CBP|CBP/p300|KAT3A|p300/CBP CREB binding protein protein-coding common_peak1_153_1294_-0.0354025306144941_10.3210351172667_0.377432261963296 chr14 14345434 14347161 + 0.377432261963296 NA promoter-TSS (NM_008369) promoter-TSS (NM_008369) -198 NM_008369 16188 Mm.425857 NM_008369 ENSMUSG00000068758 Il3ra CD123|CDw123|SUT-1 interleukin 3 receptor, alpha chain protein-coding common_peak1_38_247_-0.0812528607790144_7.91356987999737_0.377334263336702 chr19 43524716 43525250 + 0.377334263336702 NA promoter-TSS (NM_010324) promoter-TSS (NM_010324) -378 NM_010324 14718 Mm.19039 NM_010324 ENSMUSG00000025190 Got1 AI789014|Got-1|cAspAT|cCAT glutamic-oxaloacetic transaminase 1, soluble protein-coding common_peak2_38_247_-0.0812528607790144_7.91356987999737_0.377334263336702 chrX 99469937 99470949 + 0.377334263336702 NA intron (NM_001290555, intron 1 of 1) CpG 292 NM_001083110 18744 Mm.8211 NM_008853 ENSMUSG00000034403 Pja1 praja-1 praja ring finger 1, E3 ubiquitin protein ligase protein-coding common_peak1_43_286_-0.0784968727953803_8.125658490278_0.377311941204878-2 chr5 122951828 122952696 + 0.377311941204878 NA intron (NM_001003953, intron 6 of 22) CpG 36837 NM_001003953 30841 Mm.86406 NM_013910 ENSMUSG00000029475 Kdm2b Cxxc2|Fbl10|Fbxl10|Jhdm1b|PCCX2 lysine (K)-specific demethylase 2B protein-coding common_peak2_43_286_-0.0784968727953803_8.125658490278_0.377311941204878 chr13 23423168 23423948 + 0.377311941204878 NA intron (NM_013924, intron 1 of 2) CpG 308 NM_013924 30946 Mm.292094 NM_013924 ENSMUSG00000036376 Abt1 - activator of basal transcription 1 protein-coding common_peak1_43_286_-0.0784968727953803_8.125658490278_0.377311941204878 chr1 185207576 185208614 + 0.377311941204878 NA intron (NM_001163754, intron 1 of 34) MTC|LTR|ERVL-MaLR 3927 NM_001163754 98732 Mm.275841 NM_172649 ENSMUSG00000039318 Rab3gap2 1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839 RAB3 GTPase activating protein subunit 2 protein-coding common_peak2_106_832_-0.0432022660097751_9.68057155236066_0.377299066116975 chr12 65172123 65173888 + 0.377299066116975 NA promoter-TSS (NM_172578) promoter-TSS (NM_172578) -425 NM_172578 217653 Mm.21144 NM_172578 ENSMUSG00000047534 Mis18bp1 6720403H11|C79407|Knl2|mKIAA1903 MIS18 binding protein 1 protein-coding common_peak2_250_2261_0.0244142668241789_11.1555903474019_0.377189582999442 chr1 172524519 172527740 + 0.377189582999442 NA intron (NM_027972, intron 1 of 11) intron (NM_027972, intron 1 of 11) 4999 NM_027972 71870 Mm.78373 NM_027972 ENSMUSG00000026546 Cfap45 1700028D05Rik|Ccdc19|Nesg1 cilia and flagella associated protein 45 protein-coding unique_peak2_54_373_-0.0656034415017217_8.51409273913678_0.377186359130682 chr10 88539411 88541280 + 0.377186359130682 NA intron (NM_175418, intron 20 of 28) intron (NM_175418, intron 20 of 28) -36375 NM_001146690 212862 Mm.288897 NM_144807 ENSMUSG00000060002 Chpt1 - choline phosphotransferase 1 protein-coding common_peak1_56_357_0.0606829422859168_8.51415724840722_0.377186359130682 chr10 127662184 127663040 + 0.377186359130682 NA intron (NM_001122895, intron 5 of 5) intron (NM_001122895, intron 5 of 5) 4091 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding common_peak2_54_373_-0.0656034415017217_8.51409273913678_0.377186359130682 chr2 27675962 27677276 + 0.377186359130682 NA promoter-TSS (NM_011305) promoter-TSS (NM_011305) -582 NM_011305 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_56_357_0.0606829422859168_8.51415724840722_0.377186359130682-2 chr16 32087429 32088314 + 0.377186359130682 NA intron (NM_024464, intron 3 of 5) intron (NM_024464, intron 3 of 5) -8529 NM_177326 224105 Mm.234204 NM_177326 ENSMUSG00000022781 Pak2 5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182 p21 protein (Cdc42/Rac)-activated kinase 2 protein-coding common_peak2_45_273_0.067041032319338_8.1315525991202_0.37703944880364 chr13 3633676 3634726 + 0.37703944880364 NA intron (NM_001267724, intron 1 of 3) CpG 169 NM_001267724 142688 Mm.253061 NM_178283 ENSMUSG00000033781 Asb13 2210015B19Rik|6430573K02Rik|Asb-13|C85285 ankyrin repeat and SOCS box-containing 13 protein-coding common_peak2_227_2083_-0.0274162203556205_11.0114314521007_0.376990520034974 chr15 51990078 51992696 + 0.376990520034974 NA intron (NM_009009, intron 1 of 13) CpG 373 NM_009009 19357 Mm.182628 NM_009009 ENSMUSG00000022314 Rad21 SCC1|mKIAA0078 RAD21 cohesin complex component protein-coding common_peak2_35_200_0.0802459818800951_7.69117468211898_0.376936853264167 chr3 136611131 136612612 + 0.376936853264167 NA Intergenic Intergenic -58195 NM_008913 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding unique_peak2_35_200_0.0802459818800951_7.69117468211898_0.376936853264167 chr17 15429978 15431191 + 0.376936853264167 NA intron (NR_033586, intron 9 of 10) intron (NR_033586, intron 9 of 10) 34338 NM_024203 67544 Mm.35039 NM_024203 ENSMUSG00000014763 Fam120b 4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838 family with sequence similarity 120, member B protein-coding common_peak1_35_200_0.0802459818800951_7.69117468211898_0.376936853264167 chr2 25607994 25608549 + 0.376936853264167 NA TTS (NM_029859) TTS (NM_029859) 175 NM_001024616 227624 Mm.29600 NM_001024616 ENSMUSG00000015087 Rabl6 B230208H17Rik|Rbel1|Rbel1a|Rbel1b|parf RAB, member RAS oncogene family-like 6 protein-coding common_peak2_62_405_0.0562732427666059_8.69347253856848_0.376918717587707 chr7 64286959 64288357 + 0.376918717587707 NA promoter-TSS (NM_172742) promoter-TSS (NM_172742) -12 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding common_peak1_66_473_-0.0581995487485347_8.85964347452399_0.376849088705198 chr5 122242194 122243322 + 0.376849088705198 NA TTS (NM_001042489) TTS (NM_001042489) 21702 NR_104441 654470 Mm.28804 NM_001039153 ENSMUSG00000038593 Tctn1 G730031O11Rik|Tect1 tectonic family member 1 protein-coding common_peak1_251_2272_0.0244518135066443_11.1626078755712_0.376824060847335 chr10 118881798 118884434 + 0.376824060847335 NA Intergenic Intergenic -14213 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_60_423_-0.0634010035162262_8.69621995280509_0.376735606911305 chr7 45569934 45571151 + 0.376735606911305 NA promoter-TSS (NM_001243052) promoter-TSS (NM_001243052) 389 NM_009737 12036 Mm.24210 NM_009737 ENSMUSG00000030826 Bcat2 Bcat-2|Eca40 branched chain aminotransferase 2, mitochondrial protein-coding common_peak2_218_1983_-0.0277427678479611_10.9403249264629_0.37669275129639 chr2 144555013 144557062 + 0.37669275129639 NA promoter-TSS (NM_001252545) promoter-TSS (NM_001252545) -192 NM_001252544 27054 Mm.248492 NM_019787 ENSMUSG00000027429 Sec23b - SEC23 homolog B, COPII coat complex component protein-coding common_peak1_149_1194_0.0339671166079132_10.2397784611721_0.376588626852569 chr2 85036705 85038168 + 0.376588626852569 NA promoter-TSS (NM_001136081) promoter-TSS (NM_001136081) -15 NM_001136081 20833 Mm.219793 NM_182990 ENSMUSG00000027067 Ssrp1 C81323|Hmg1-rs1|Hmgi-rs3|Hmgox|T160 structure specific recognition protein 1 protein-coding common_peak2_102_749_0.0408010983934961_9.57114733457999_0.376556142057344 chr5 121328707 121330422 + 0.376556142057344 NA exon (NM_181421, exon 49 of 76) exon (NM_181421, exon 49 of 76) 56051 NM_001163470 231712 Mm.20488 NM_172275 ENSMUSG00000042726 Trafd1 1110008K06Rik|Fln29 TRAF type zinc finger domain containing 1 protein-coding common_peak1_13_74_-0.16886625166431_6.14438556466373_0.376523540924376-3 chr6 127636674 127637049 + 0.376523540924376 NA Intergenic Intergenic 58886 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak1_13_74_-0.16886625166431_6.14438556466373_0.376523540924376 chr11 53807003 53807358 + 0.376523540924376 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 36707 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak1_13_74_-0.16886625166431_6.14438556466373_0.376523540924376-2 chr6 108836343 108836680 + 0.376523540924376 NA intron (NM_138677, intron 1 of 11) intron (NM_138677, intron 1 of 11) 7870 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding unique_peak2_13_74_-0.16886625166431_6.14438556466373_0.376523540924376 chrX 136979918 136980510 + 0.376523540924376 NA TTS (NM_001114179) TTS (NM_001114179) -3340 NM_207267 399591 Mm.381904 NM_207267 ENSMUSG00000072955 Tmsb15l 4930488E11Rik|Tb15r|Tmsb15b1-Tmsb15b2|Tmsb15r thymosin beta 15b like protein-coding common_peak1_26_139_0.0929245498946285_7.17574529189228_0.376443500980134-4 chr9 124143850 124144457 + 0.376443500980134 NA Intergenic Intergenic 22610 NM_009917 12774 Mm.14302 NM_009917 ENSMUSG00000079227 Ccr5 AM4-7|CD195|Cmkbr5 chemokine (C-C motif) receptor 5 protein-coding common_peak1_26_139_0.0929245498946285_7.17574529189228_0.376443500980134-2 chr17 31070386 31070953 + 0.376443500980134 NA intron (NM_009593, intron 2 of 14) intron (NM_009593, intron 2 of 14) 12975 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak1_26_139_0.0929245498946285_7.17574529189228_0.376443500980134-3 chr4 139211280 139211843 + 0.376443500980134 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 17450 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding common_peak1_26_139_0.0929245498946285_7.17574529189228_0.376443500980134 chr14 53795215 53795862 + 0.376443500980134 NA Intergenic Intergenic 458391 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_26_139_0.0929245498946285_7.17574529189228_0.376443500980134-5 chr9 124311559 124312152 + 0.376443500980134 NA intron (NM_001243117, intron 1 of 4) intron (NM_001243117, intron 1 of 4) 839 NM_001243118 630836 Mm.458553 NM_001243117 ENSMUSG00000074829 2010315B03Rik BC029716 RIKEN cDNA 2010315B03 gene protein-coding unique_peak2_26_139_0.0929245498946285_7.17574529189228_0.376443500980134-2 chr2 31822158 31823075 + 0.376443500980134 NA intron (NM_178887, intron 4 of 6) intron (NM_178887, intron 4 of 6) -12036 NM_183424 227717 Mm.185027 NM_183424 ENSMUSG00000043102 Qrfp P518 pyroglutamylated RFamide peptide protein-coding unique_peak2_26_139_0.0929245498946285_7.17574529189228_0.376443500980134 chr19 45789968 45790956 + 0.376443500980134 NA Intergenic Intergenic -7171 NM_023799 76055 Mm.122725 NM_023799 ENSMUSG00000025220 Mgea5 2810009A20Rik|4833427O07Rik|5830447M11Rik|AA408215|Hy5|Ncoat|OGA|mKIAA0679 meningioma expressed antigen 5 (hyaluronidase) protein-coding common_peak2_125_962_0.0368294832946798_9.9298067294908_0.376309936469502 chr6 122825282 122827384 + 0.376309936469502 NA intron (NM_021899, intron 1 of 10) intron (NM_021899, intron 1 of 10) -5044 NR_106090 102465710 NR_106090 ENSMUSG00000106580 Mir7231 mmu-mir-7231 microRNA 7231 ncRNA unique_peak1_11_49_0.143306967131015_5.71550967334023_0.376238101225474 chr14 46817392 46817754 + 0.376238101225474 NA intron (NM_022023, intron 1 of 6) intron (NM_022023, intron 1 of 6) 4669 NM_022023 63985 Mm.87312 NM_022023 ENSMUSG00000062014 Gmfb 3110001H22Rik|3110001O16Rik|AI851627|C79176|D14Ertd630e glia maturation factor, beta protein-coding common_peak2_229_2105_-0.027111018867533_11.026734211592_0.376189380054213 chr4 114985553 114987892 + 0.376189380054213 NA intron (NM_025647, intron 1 of 5) CpG 506 NM_025647 66588 Mm.294159 NM_025647 ENSMUSG00000028719 Cmpk1 0610011D08Rik|CK|Cmpk|UMP-CMPk cytidine monophosphate (UMP-CMP) kinase 1 protein-coding common_peak2_213_1856_0.0268246306067077_10.8721704152388_0.376117282669998 chr11 49845982 49848911 + 0.376117282669998 NA intron (NM_001163671, intron 1 of 11) intron (NM_001163671, intron 1 of 11) 695 NM_016961 26420 Mm.68933 NM_016961 ENSMUSG00000020366 Mapk9 AI851083|JNK2|Prkm9|p54aSAPK mitogen-activated protein kinase 9 protein-coding common_peak1_213_1856_0.0268246306067077_10.8721704152388_0.376117282669998 chr2 150569370 150572245 + 0.376117282669998 NA intron (NM_009977, intron 1 of 3) intron (NM_009977, intron 1 of 3) 392 NM_009977 13011 Mm.12965 NM_009977 ENSMUSG00000068129 Cst7 Cmap cystatin F (leukocystatin) protein-coding unique_peak2_29_181_-0.0991382076009932_7.4582255363982_0.375899279846186-2 chr7 128158236 128159386 + 0.375899279846186 NA Intergenic Intergenic -15135 NM_001029872 381924 Mm.334257 NM_001029872 ENSMUSG00000070369 Itgad Cd11d integrin, alpha D protein-coding unique_peak2_29_181_-0.0991382076009932_7.4582255363982_0.375899279846186 chr14 54350967 54351874 + 0.375899279846186 NA Intergenic RLTR44-int|LTR|ERVK -9421 NM_026936 69089 Mm.182340 NM_026936 ENSMUSG00000000959 Oxa1l 1810020M02Rik|AI894287 oxidase assembly 1-like protein-coding common_peak1_51_319_0.0601054609399263_8.35198082535732_0.375857601923925 chr17 24723700 24724404 + 0.375857601923925 NA intron (NM_026684, intron 1 of 3) intron (NM_026684, intron 1 of 3) 336 NM_026684 68342 Mm.1129 NM_026684 ENSMUSG00000040048 Ndufb10 0610011B04Rik|22kDa|PDSW NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10 protein-coding common_peak2_51_319_0.0601054609399263_8.35198082535732_0.375857601923925 chr1 181150754 181151569 + 0.375857601923925 NA intron (NM_030131, intron 1 of 4) CpG 230 NM_030131 98417 Mm.38229 NM_030131 ENSMUSG00000062169 Cnih4 AI647760|AW050376|CNIH-4|D530030D03Rik|E430023H19Rik|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding common_peak1_220_2005_-0.0275647145631766_10.9563235333306_0.375854780484317 chr1 138962697 138964767 + 0.375854780484317 NA promoter-TSS (NM_001166501) promoter-TSS (NM_001166501) 23 NM_001166501 329260 Mm.337604 NM_181347 ENSMUSG00000056268 Dennd1b 4632404N19Rik|4930467M19Rik|6820401H01Rik|F730008N07Rik DENN/MADD domain containing 1B protein-coding common_peak1_139_1152_-0.0365064607555254_10.152923567274_0.375831283646681 chr5 76183323 76184773 + 0.375831283646681 NA 5' UTR (NM_011626, exon 1 of 6) 5' UTR (NM_011626, exon 1 of 6) 168 NM_011626 21982 Mm.790 NM_011626 ENSMUSG00000029234 Tmem165 AV026557|Tpardl|Tparl|pFT27 transmembrane protein 165 protein-coding common_peak1_18_89_0.108511107067216_6.54610864986328_0.375770379854992-4 chr9 64815675 64816190 + 0.375770379854992 NA intron (NM_001162917, intron 2 of 34) B3|SINE|B2 4921 NM_001162917 102442 Mm.222473 NM_176935 ENSMUSG00000053641 Dennd4a AI115600|AI851943|F730015K02Rik DENN/MADD domain containing 4A protein-coding common_peak1_18_89_0.108511107067216_6.54610864986328_0.375770379854992-2 chr7 66193664 66194069 + 0.375770379854992 NA Intergenic MLT1K|LTR|ERVL-MaLR 84351 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_18_89_0.108511107067216_6.54610864986328_0.375770379854992-3 chr8 71296407 71296887 + 0.375770379854992 NA intron (NM_001142323, intron 2 of 38) intron (NM_001142323, intron 2 of 38) 23933 NM_001142323 17925 Mm.33779 NM_015742 ENSMUSG00000004677 Myo9b - myosin IXb protein-coding unique_peak2_18_89_0.108511107067216_6.54610864986328_0.375770379854992 chr1 184733382 184734132 + 0.375770379854992 NA Intergenic Intergenic -1264 NM_008250 15284 Mm.1347 NM_008250 ENSMUSG00000039377 Hlx Hlx1 H2.0-like homeobox protein-coding unique_peak2_18_89_0.108511107067216_6.54610864986328_0.375770379854992-3 chr7 75600515 75601237 + 0.375770379854992 NA intron (NM_029332, intron 5 of 36) intron (NM_029332, intron 5 of 36) 145342 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding unique_peak2_18_89_0.108511107067216_6.54610864986328_0.375770379854992-2 chr13 30814339 30815226 + 0.375770379854992 NA 3' UTR (NM_025588, exon 28 of 28) 3' UTR (NM_025588, exon 28 of 28) 65524 NM_013674 16364 Mm.4677 NM_013674 ENSMUSG00000021356 Irf4 AI385587|IRF-4|LSIRF|NF-EM5|Spip interferon regulatory factor 4 protein-coding common_peak1_18_89_0.108511107067216_6.54610864986328_0.375770379854992 chr15 34046620 34047085 + 0.375770379854992 NA Intergenic Intergenic -35867 NM_026002 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding common_peak2_18_89_0.108511107067216_6.54610864986328_0.375770379854992 chr1 170037231 170037532 + 0.375770379854992 NA intron (NM_022563, intron 1 of 16) (CTATT)n|Simple_repeat|Simple_repeat 51563 NM_022563 18214 Mm.229249 NM_022563 ENSMUSG00000026674 Ddr2 AW495251|Ntrkr3|tyro10 discoidin domain receptor family, member 2 protein-coding common_peak1_142_1126_0.0339185464102059_10.1552310733773_0.375700046715265 chr17 36836427 36837886 + 0.375700046715265 NA promoter-TSS (NM_001286726) promoter-TSS (NM_001286726) 10 NM_001286726 22670 Mm.34587 NM_030698 ENSMUSG00000024457 Trim26 AI462198|Zfp173|Zfp1736 tripartite motif-containing 26 protein-coding common_peak2_108_851_-0.0429673846962011_9.71322592787774_0.375571757045277 chr12 98746233 98747993 + 0.375571757045277 NA non-coding (NR_027648, exon 1 of 13) non-coding (NR_027648, exon 1 of 13) 145 NM_029334 75553 Mm.25549 NM_029334 ENSMUSG00000021012 Zc3h14 1010001P15Rik|1700016A15Rik|2700069A02Rik|AU014748 zinc finger CCCH type containing 14 protein-coding common_peak1_57_365_0.0595757874148823_8.54548773199148_0.375552725407373 chr2 18065349 18066069 + 0.375552725407373 NA intron (NR_045538, intron 2 of 22) intron (NR_045538, intron 2 of 22) 1124 NM_001252561 17354 Mm.209175 NM_010804 ENSMUSG00000026743 Mllt10 Af10|B130021D15Rik|D630001B22Rik|mKIAA4140 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 protein-coding common_peak2_168_1385_0.0311023063921958_10.4522626953333_0.375532944217016 chr7 27227512 27229702 + 0.375532944217016 NA promoter-TSS (NM_181593) promoter-TSS (NM_181593) -10 NM_181593 233011 Mm.30963 NM_181593 ENSMUSG00000003752 Itpkc 9130023N17Rik inositol 1,4,5-trisphosphate 3-kinase C protein-coding common_peak2_165_1416_-0.0325058625633137_10.4523711116364_0.375532944217016 chr15 99971943 99973849 + 0.375532944217016 NA non-coding (NR_028124, exon 1 of 1) non-coding (NR_028124, exon 1 of 1) 116 NM_001284523 207214 Mm.28811 NM_001024526 ENSMUSG00000023025 Larp4 DXErtd793|DXErtd793e La ribonucleoprotein domain family, member 4 protein-coding common_peak1_63_413_0.0559909279985558_8.7214824214986_0.375478165058008-2 chr5 24451734 24452461 + 0.375478165058008 NA promoter-TSS (NM_139153) promoter-TSS (NM_139153) -80 NM_139153 213990 Mm.250703 NM_139153 ENSMUSG00000023353 Agap3 AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding common_peak1_63_413_0.0559909279985558_8.7214824214986_0.375478165058008 chr18 80696402 80697734 + 0.375478165058008 NA intron (NM_198429, intron 2 of 9) intron (NM_198429, intron 2 of 9) 11105 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak1_22_114_0.0929707531491353_6.89197542751894_0.37526272303666-4 chr3 68793223 68793711 + 0.37526272303666 NA Intergenic Intergenic -76119 NM_001167996 68725 Mm.45741 NM_001167996 ENSMUSG00000046999 1110032F04Rik AI115547 RIKEN cDNA 1110032F04 gene protein-coding unique_peak2_22_114_0.0929707531491353_6.89197542751894_0.37526272303666 chr12 80118464 80119496 + 0.37526272303666 NA Intergenic Intergenic -5967 NM_007564 12192 Mm.235132 NM_007564 ENSMUSG00000021127 Zfp36l1 AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1 zinc finger protein 36, C3H type-like 1 protein-coding common_peak1_22_114_0.0929707531491353_6.89197542751894_0.37526272303666-3 chr19 29067184 29067721 + 0.37526272303666 NA non-coding (NR_045687, exon 1 of 2) non-coding (NR_045687, exon 1 of 2) 151 NR_045687 100503337 Mm.103412 NR_045687 Gm9895 ENSMUSG00000052976 predicted gene 9895 ncRNA common_peak1_22_114_0.0929707531491353_6.89197542751894_0.37526272303666-2 chr18 75478295 75478774 + 0.37526272303666 NA intron (NM_201354, intron 9 of 11) intron (NM_201354, intron 9 of 11) -36111 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA common_peak1_22_114_0.0929707531491353_6.89197542751894_0.37526272303666 chr10 43478474 43478924 + 0.37526272303666 NA promoter-TSS (NM_199028) promoter-TSS (NM_199028) -441 NM_199028 331623 Mm.490388 NM_199028 ENSMUSG00000038214 Bend3 mKIAA1553 BEN domain containing 3 protein-coding common_peak2_116_927_-0.0409030293664276_9.83752948044436_0.375235163499318 chr1 153899110 153901244 + 0.375235163499318 NA TTS (NR_106194) TTS (NR_106194) 248 NM_008131 14645 Mm.210745 NM_008131 ENSMUSG00000026473 Glul GS|Glns glutamate-ammonia ligase (glutamine synthetase) protein-coding common_peak2_111_831_0.0393496542495448_9.72011454526587_0.37521803553199 chr1 86440602 86443407 + 0.37521803553199 NA Intergenic CpG 15675 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 1700019O17Rik - RIKEN cDNA 1700019O17 gene protein-coding common_peak2_140_1162_-0.0363697778939152_10.1654504925263_0.375179672037645 chr7 28337835 28339936 + 0.375179672037645 NA promoter-TSS (NM_013676) promoter-TSS (NM_013676) -166 NM_013676 20924 Mm.285906 NM_013676 ENSMUSG00000003435 Supt5 AL033283|AL033321|AU019549|Spt5|Supt5h suppressor of Ty 5 protein-coding common_peak2_252_2363_-0.0251721029561693_11.1944282686994_0.375174213531175 chr14 87415185 87417954 + 0.375174213531175 NA promoter-TSS (NM_172605) promoter-TSS (NM_172605) -14 NM_172605 219249 Mm.35168 NM_172605 ENSMUSG00000022019 Tdrd3 4732418C03Rik|6720468N18 tudor domain containing 3 protein-coding common_peak2_34_217_-0.0867386102533922_7.72481501965023_0.375137621598233 chr2 155728733 155729908 + 0.375137621598233 NA exon (NM_145537, exon 1 of 11) exon (NM_145537, exon 1 of 11) 155 NM_145537 108687 Mm.273706 NM_145537 ENSMUSG00000038312 Edem2 9530090G24Rik|AI327354 ER degradation enhancer, mannosidase alpha-like 2 protein-coding common_peak1_46_281_0.0635797350272238_8.17134121991241_0.374927653232524 chr11 49997056 49997794 + 0.374927653232524 NA Intergenic ORR1F|LTR|ERVL-MaLR -27906 NM_021540 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak2_76_521_0.0488155442031815_9.05231376867147_0.374917219281075 chr9 36766775 36767775 + 0.374917219281075 NA intron (NM_008408, intron 1 of 17) intron (NM_008408, intron 1 of 17) 303 NM_008408 16430 Mm.2863 NM_008408 ENSMUSG00000032116 Stt3a AA408947|BB081708|Itm1 STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) protein-coding common_peak1_127_981_0.0365109823695438_9.95783470549947_0.374870901028043 chr6 124916948 124918372 + 0.374870901028043 NA 5' UTR (NM_026988, exon 1 of 5) 5' UTR (NM_026988, exon 1 of 5) 286 NM_026988 69202 Mm.142187 NM_026988 ENSMUSG00000030122 Ptms 2610009E16Rik parathymosin protein-coding unique_peak2_10_56_-0.199704582657145_5.73303772283617_0.374817547128552 chr9 59941930 59942465 + 0.374817547128552 NA TTS (NM_013708) TTS (NM_013708) 7882 NM_013708 23958 Mm.103641 NM_013708 ENSMUSG00000032292 Nr2e3 A930035N01Rik|PNR|RNR|rd7 nuclear receptor subfamily 2, group E, member 3 protein-coding common_peak1_104_767_0.0406177299556632_9.60527136569899_0.374809744236104 chr5 73193647 73194921 + 0.374809744236104 NA intron (NM_028194, intron 3 of 62) intron (NM_028194, intron 3 of 62) 62334 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak2_296_2872_-0.0227532975650764_11.47696562875_0.374784598061254 chr11 6414832 6418321 + 0.374784598061254 NA intron (NM_008907, intron 1 of 4) intron (NM_008907, intron 1 of 4) 706 NM_008907 268373 Mm.5246 NM_008907 ENSMUSG00000071866 Ppia 2700098C05|Cphn|CyP-18|CypA peptidylprolyl isomerase A protein-coding common_peak1_109_860_-0.0419660978245719_9.72888637848456_0.374780576763308 chr11 49092041 49093363 + 0.374780576763308 NA intron (NM_001271676, intron 2 of 2) Lx4A|LINE|L1 5685 NM_008330 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_194_1722_-0.0296579497387679_10.7358780113556_0.374644766897607 chr6 37820362 37823130 + 0.374644766897607 NA Intergenic Intergenic -49065 NM_001272064 21848 Mm.41063 NM_145076 ENSMUSG00000029833 Trim24 A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a tripartite motif-containing 24 protein-coding common_peak1_31_173_0.0799220784627961_7.48290453508013_0.374640570688717-2 chr12 69241507 69241938 + 0.374640570688717 NA promoter-TSS (NM_178253) promoter-TSS (NM_178253) -110 NM_178253 271005 Mm.180969 NM_178253 ENSMUSG00000051890 Klhdc1 - kelch domain containing 1 protein-coding common_peak1_31_173_0.0799220784627961_7.48290453508013_0.374640570688717 chr10 41893851 41894482 + 0.374640570688717 NA intron (NM_001162908, intron 2 of 9) intron (NM_001162908, intron 2 of 9) 6727 NM_001013370 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding unique_peak2_31_173_0.0799220784627961_7.48290453508013_0.374640570688717 chr8 84871486 84872770 + 0.374640570688717 NA promoter-TSS (NR_031759) promoter-TSS (NR_031759) 17 NM_001168246 71846 Mm.229128 NM_027954 ENSMUSG00000003824 Syce2 1700013H19Rik|AA407907|Cesc1 synaptonemal complex central element protein 2 protein-coding common_peak2_158_1344_-0.0335141758475892_10.3766333695202_0.374557710636539 chr3 103808520 103810576 + 0.374557710636539 NA promoter-TSS (NM_001163553) promoter-TSS (NM_001163553) 31 NM_001163553 67489 Mm.197568 NM_026193 ENSMUSG00000032952 Ap4b1 1810038H16Rik|AV004952|Ap4b4 adaptor-related protein complex AP-4, beta 1 protein-coding common_peak1_97_704_0.0420091008108852_9.4824839976916_0.374528884433537 chr2 150904037 150905290 + 0.374528884433537 NA promoter-TSS (NM_024465) promoter-TSS (NM_024465) 68 NM_024465 76192 Mm.112632 NM_024465 ENSMUSG00000032046 Abhd12 1500011G07Rik|6330583M11Rik|AI431047|AW547313 abhydrolase domain containing 12 protein-coding common_peak1_112_840_0.039557507917257_9.73574074421377_0.374434306951563 chr4 134534387 134535599 + 0.374434306951563 NA intron (NM_029759, intron 1 of 6) CpG 275 NM_001256112 76824 Mm.30153 NM_029759 ENSMUSG00000046671 Mtfr1l 2410166I05Rik|AI480750|Fam54b mitochondrial fission regulator 1-like protein-coding common_peak2_204_1830_-0.0288672238535899_10.8239824638705_0.374411927598493 chr10 79907847 79910030 + 0.374411927598493 NA promoter-TSS (NM_001163276) promoter-TSS (NM_001163276) 0 NM_001163276 216154 Mm.260089 NM_198107 ENSMUSG00000013833 Med16 95kDa|A630083L04|Thrap5|Trap95 mediator complex subunit 16 protein-coding common_peak1_25_153_-0.111365296053969_7.21110389266792_0.374404511353022 chr6 130236319 130236884 + 0.374404511353022 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -3279 NM_001110323 16638 Mm.441781 NM_014194 ENSMUSG00000067599 Klra7 LGL-1|Ly-49G.1|Ly-49G.2|Ly-49G.3|Ly49G.4|Ly49g|Ly49g1|Ly49g2 killer cell lectin-like receptor, subfamily A, member 7 protein-coding common_peak1_25_153_-0.111365296053969_7.21110389266792_0.374404511353022-2 chr7 27838527 27839037 + 0.374404511353022 NA intron (NM_011762, intron 1 of 4) (TG)n|Simple_repeat|Simple_repeat 198 NM_011762 22717 Mm.379046 NM_011762 ENSMUSG00000078779 Zfp59 Mfg-2|Mfg2 zinc finger protein 59 protein-coding common_peak1_125_1014_-0.0390425409343997_9.96774274160534_0.374354501925089 chr17 66110973 66112694 + 0.374354501925089 NA intron (NM_001037757, intron 1 of 10) intron (NM_001037757, intron 1 of 10) 188 NM_001037757 68767 Mm.296545 NM_026833 ENSMUSG00000024101 Washc1 1110049F14Rik|ORF19|Wash|Wash1 WASH complex subunit 1 protein-coding unique_peak2_41_244_0.0674490159822838_7.97036244699371_0.374287486621325 chr14 121905950 121907681 + 0.374287486621325 NA intron (NM_026861, intron 2 of 8) intron (NM_026861, intron 2 of 8) 8959 NM_182806 110168 Mm.37405 NM_182806 ENSMUSG00000050350 Gpr18 - G protein-coupled receptor 18 protein-coding common_peak1_50_341_-0.0701817377584408_8.38276164600668_0.374286739791454 chr11 117265998 117266644 + 0.374286739791454 NA promoter-TSS (NM_001113487) promoter-TSS (NM_001113487) 75 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding common_peak1_17_99_-0.139170827902057_6.5742707758237_0.374195957159847 chr16 23990809 23991248 + 0.374195957159847 NA Intergenic Intergenic -2416 NM_009744 12053 Mm.347398 NM_009744 ENSMUSG00000022508 Bcl6 Bcl5 B cell leukemia/lymphoma 6 protein-coding unique_peak2_17_99_-0.139170827902057_6.5742707758237_0.374195957159847 chr14 31399467 31400375 + 0.374195957159847 NA intron (NM_011894, intron 3 of 8) intron (NM_011894, intron 3 of 8) 36112 NM_011894 24056 Mm.383198 NM_011894 ENSMUSG00000021892 Sh3bp5 AI606498|SH3BP-5|Sab SH3-domain binding protein 5 (BTK-associated) protein-coding unique_peak2_17_99_-0.139170827902057_6.5742707758237_0.374195957159847-2 chr8 113688025 113688691 + 0.374195957159847 NA Intergenic Intergenic 45145 NM_001048145 668110 Mm.390078 NM_029139 ENSMUSG00000033409 Syce1l 4930481F22Rik|MMRP|PSESS|mmrp2 synaptonemal complex central element protein 1 like protein-coding common_peak2_287_2766_-0.0229723219918636_11.422620767614_0.374177992620747 chr13 98812221 98816379 + 0.374177992620747 NA intron (NM_172591, intron 1 of 25) intron (NM_172591, intron 1 of 25) 1149 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak1_68_490_-0.0569838940678977_8.91108726728074_0.374169093298881 chr5 125051895 125053183 + 0.374169093298881 NA intron (NM_001253904, intron 18 of 47) intron (NM_001253904, intron 18 of 47) 49064 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding common_peak2_68_490_-0.0569838940678977_8.91108726728074_0.374169093298881 chr9 108691571 108693185 + 0.374169093298881 NA 5' UTR (NM_008924, exon 1 of 11) 5' UTR (NM_008924, exon 1 of 11) 235 NM_008924 19087 Mm.253102 NM_008924 ENSMUSG00000032601 Prkar2a 1110061A24Rik|AI317181|AI836829|RII(alpha) protein kinase, cAMP dependent regulatory, type II alpha protein-coding common_peak1_36_208_0.0724245191305277_7.74357139164615_0.374098455350061 chr11 96311128 96311842 + 0.374098455350061 NA Intergenic Intergenic -4575 NR_131758 75395 Mm.440014 NR_131758 ENSMUSG00000085645 Hoxb5os 0610040B09Rik|AV302770|Hoxb5/6as homeobox B5 and homeobox B6, opposite strand ncRNA common_peak2_36_208_0.0724245191305277_7.74357139164615_0.374098455350061 chr6 125237871 125239345 + 0.374098455350061 NA intron (NR_015604, intron 1 of 1) intron (NR_015604, intron 1 of 1) -1581 NM_001286753 21940 Mm.367714 NM_001033126 ENSMUSG00000030336 Cd27 S152|Tnfrsf7|Tp55 CD27 antigen protein-coding common_peak1_36_208_0.0724245191305277_7.74357139164615_0.374098455350061-2 chr12 25299602 25300472 + 0.374098455350061 NA Intergenic MTD|LTR|ERVL-MaLR 170863 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_208_1803_0.0267619932693623_10.8303646198901_0.37408944829095 chr9 70655817 70658079 + 0.37408944829095 NA exon (NM_172772, exon 1 of 9) exon (NM_172772, exon 1 of 9) 226 NM_172772 235461 Mm.170855 NM_172772 ENSMUSG00000042444 Fam63b AI465301|B230380D07Rik|mKIAA1164 family with sequence similarity 63, member B protein-coding common_peak1_208_1803_0.0267619932693623_10.8303646198901_0.37408944829095 chr19 45782340 45783810 + 0.37408944829095 NA exon (NM_023799, exon 1 of 16) exon (NM_023799, exon 1 of 16) 216 NM_023799 76055 Mm.122725 NM_023799 ENSMUSG00000025220 Mgea5 2810009A20Rik|4833427O07Rik|5830447M11Rik|AA408215|Hy5|Ncoat|OGA|mKIAA0679 meningioma expressed antigen 5 (hyaluronidase) protein-coding common_peak2_189_1602_0.0285233913070204_10.6608204058081_0.374084503447116 chr3 93590650 93593913 + 0.374084503447116 NA Intergenic Intergenic 37164 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding common_peak2_88_666_-0.0485245824203968_9.35728065997439_0.374078072611304 chr4 59286636 59288630 + 0.374078072611304 NA Intergenic GA-rich|Low_complexity|Low_complexity 27582 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_21_125_-0.117482180805966_6.91853883309693_0.374030066469782 chr4 123565613 123566123 + 0.374030066469782 NA intron (NM_001199137, intron 1 of 92) intron (NM_001199137, intron 1 of 92) -50552 NR_105824 102465214 NR_105824 ENSMUSG00000099005 Mir6398 Gm27657|mmu-mir-6398 microRNA 6398 ncRNA common_peak1_21_125_-0.117482180805966_6.91853883309693_0.374030066469782-3 chr9 92379433 92379845 + 0.374030066469782 NA Intergenic L1M2|LINE|L1 70262 NM_001033184 78459 Mm.179195 NM_001033184 ENSMUSG00000074139 1700057G04Rik - RIKEN cDNA 1700057G04 gene protein-coding common_peak1_21_125_-0.117482180805966_6.91853883309693_0.374030066469782-2 chr9 32922323 32922930 + 0.374030066469782 NA intron (NR_131058, intron 1 of 3) intron (NR_131058, intron 1 of 3) 6340 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA unique_peak2_21_125_-0.117482180805966_6.91853883309693_0.374030066469782 chr6 54941655 54942598 + 0.374030066469782 NA intron (NM_172729, intron 4 of 11) intron (NM_172729, intron 4 of 11) 29535 NM_001171007 107607 Mm.28498 NM_172729 ENSMUSG00000038058 Nod1 C230079P11|Card4|F830007N14Rik|Nlrc1 nucleotide-binding oligomerization domain containing 1 protein-coding common_peak1_56_389_-0.0628315941994373_8.57591451664989_0.373987711182641 chr4 133131663 133132550 + 0.373987711182641 NA intron (NM_153423, intron 1 of 8) intron (NM_153423, intron 1 of 8) 1473 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak2_56_389_-0.0628315941994373_8.57591451664989_0.373987711182641 chr2 25262535 25263622 + 0.373987711182641 NA exon (NM_175286, exon 1 of 4) exon (NM_175286, exon 1 of 4) 480 NM_175286 97031 Mm.308539 NM_175286 ENSMUSG00000048707 Tprn C430004E15Rik|C87750 taperin protein-coding common_peak2_62_439_-0.0597505535728775_8.75148443673822_0.373921552872926 chr19 8836935 8838373 + 0.373921552872926 NA 5' UTR (NM_001136064, exon 1 of 12) 5' UTR (NM_001136064, exon 1 of 12) 187 NM_001136064 14705 Mm.345134 NM_008144 ENSMUSG00000071657 Bscl2 2900097C17Rik|AI046355|Gng3lg Berardinelli-Seip congenital lipodystrophy 2 (seipin) protein-coding common_peak1_58_374_0.0547796196585821_8.57813659521253_0.373796694432999 chr1 92815344 92816336 + 0.373796694432999 NA Intergenic Intergenic -15846 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_256_2408_-0.024617029081794_11.2219101636976_0.373776990513902 chr16 78536427 78542055 + 0.373776990513902 NA Intergenic L1_Mus1|LINE|L1 -21075 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak2_424_4335_0.0175983933769412_12.0909482380423_0.373611999110555 chr9 66913078 66920890 + 0.373611999110555 NA intron (NM_173413, intron 1 of 7) tRNA-Ala-GCY_|tRNA|tRNA 2721 NM_173413 235442 Mm.260376 NM_173413 ENSMUSG00000036943 Rab8b 5930437D16|D330025I23Rik RAB8B, member RAS oncogene family protein-coding unique_peak2_75_550_-0.0523196828015546_9.07974866717038_0.373550060993235 chr6 47684914 47686469 + 0.373550060993235 NA promoter-TSS (NR_002841) promoter-TSS (NR_002841) -315 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_187_1647_-0.0301448173844872_10.671428118491_0.373546825355076 chr1 52118419 52120833 + 0.373546825355076 NA promoter-TSS (NM_001205313) promoter-TSS (NM_001205313) 4 NM_001205313 20846 Mm.277406 NM_009283 ENSMUSG00000026104 Stat1 2010005J02Rik|AA408197 signal transducer and activator of transcription 1 protein-coding common_peak2_45_301_-0.0733316240452133_8.20173892730247_0.373419249718124 chr8 72723158 72724032 + 0.373419249718124 NA intron (NM_009188, intron 1 of 18) CpG 325 NM_009188 20467 Mm.2137 NM_009188 ENSMUSG00000031622 Sin3b 2810430C10Rik transcriptional regulator, SIN3B (yeast) protein-coding common_peak2_84_590_0.0446275276749599_9.22932808401501_0.373415760724817 chr7 45591265 45593286 + 0.373415760724817 NA Intergenic Intergenic -17099 NR_038165 71661 Mm.439894 NR_038165 ENSMUSG00000109644 0610005C13Rik AI182092 RIKEN cDNA 0610005C13 gene ncRNA common_peak1_84_590_0.0446275276749599_9.22932808401501_0.373415760724817 chr2 24919121 24920220 + 0.373415760724817 NA promoter-TSS (NM_001109686) promoter-TSS (NM_001109686) -61 NM_001109686 77683 Mm.24176 NM_172545 ENSMUSG00000036893 Ehmt1 9230102N17Rik|D330003E03|Eu-HMTase1|GLP|GLP1|KMT1D|mKIAA1876 euchromatic histone methyltransferase 1 protein-coding common_peak1_121_925_0.0362633789730928_9.87300007274678_0.373414554131382 chr3 130708622 130709935 + 0.373414554131382 NA exon (NM_025509, exon 1 of 4) exon (NM_025509, exon 1 of 4) 166 NM_025509 66357 Mm.300697 NM_025509 ENSMUSG00000041084 Ostc 2310008M10Rik|5730557H03Rik oligosaccharyltransferase complex subunit (non-catalytic) protein-coding common_peak1_143_1192_-0.0358560322634922_10.2024503115635_0.373291220084168 chr16 13671621 13672828 + 0.373291220084168 NA intron (NM_025976, intron 1 of 7) CpG 204 NM_025653 67118 Mm.223689 NM_025653 ENSMUSG00000022684 Bfar 3010001A07Rik|3110001I22Rik|AI666707|AW107665|Bar|Rnf47 bifunctional apoptosis regulator protein-coding common_peak2_82_612_-0.0502373945224335_9.23462456642956_0.373175254295096 chr4 83417005 83418543 + 0.373175254295096 NA promoter-TSS (NM_029949) promoter-TSS (NM_029949) 30 NM_029949 77634 Mm.271985 NM_029949 ENSMUSG00000028483 Snapc3 1810020H02Rik|4930558A07Rik|5031401C21Rik|AI414457|E030018J20Rik small nuclear RNA activating complex, polypeptide 3 protein-coding common_peak1_47_288_0.0654620967777735_8.20765673088956_0.373173816265957 chr9 78481884 78482430 + 0.373173816265957 NA promoter-TSS (NM_010106) promoter-TSS (NM_010106) -433 NM_010106 13627 Mm.138471 NM_010106 ENSMUSG00000037742 Eef1a1 - eukaryotic translation elongation factor 1 alpha 1 protein-coding common_peak2_106_785_0.0405849170971671_9.63867796080719_0.373142288072347 chr5 145190664 145192196 + 0.373142288072347 NA intron (NM_020582, intron 1 of 3) intron (NM_020582, intron 1 of 3) 162 NM_020582 57423 Mm.133551 NM_020582 ENSMUSG00000038690 Atp5j2 1110019H14Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2 protein-coding common_peak2_89_675_-0.0480884875311958_9.37683519251659_0.373088625216642 chr16 52088545 52091923 + 0.373088625216642 NA intron (NM_001033238, intron 3 of 17) intron (NM_001033238, intron 3 of 17) 58685 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding unique_peak2_30_188_-0.0955602194867664_7.51446231447769_0.373026694015423 chr7 141091877 141093160 + 0.373026694015423 NA intron (NM_023059, intron 6 of 9) CpG 8028 NM_023059 24058 Mm.38017 NM_023059 ENSMUSG00000025494 Sigirr AI256711|TIR8 single immunoglobulin and toll-interleukin 1 receptor (TIR) domain protein-coding common_peak1_30_188_-0.0955602194867664_7.51446231447769_0.373026694015423-2 chr5 140574099 140574747 + 0.373026694015423 NA Intergenic BC1_Mm|scRNA|scRNA -9356 NM_030022 77998 Mm.160040 NM_030022 ENSMUSG00000036586 Grifin E130101O17Rik galectin-related inter-fiber protein protein-coding common_peak1_30_188_-0.0955602194867664_7.51446231447769_0.373026694015423 chr4 97751316 97751931 + 0.373026694015423 NA intron (NM_001122952, intron 1 of 10) CpG -26003 NM_001122953 18027 Mm.31274 NM_010905 ENSMUSG00000028565 Nfia 1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A nuclear factor I/A protein-coding common_peak1_27_146_0.0868924051815609_7.24311854742714_0.372946200950652 chr14 103033660 103034109 + 0.372946200950652 NA promoter-TSS (NR_045657) promoter-TSS (NR_045657) -81 NR_045657 71264 Mm.399572 NR_045657 4933432I03Rik - RIKEN cDNA 4933432I03 gene ncRNA common_peak2_27_146_0.0868924051815609_7.24311854742714_0.372946200950652 chr3 10342182 10343289 + 0.372946200950652 NA intron (NM_025512, intron 6 of 7) RLTR20D|LTR|ERVK -7079 NM_001010834 241877 Mm.442146 NM_001010834 ENSMUSG00000058921 Slc10a5 Gm405|mP5 solute carrier family 10 (sodium/bile acid cotransporter family), member 5 protein-coding unique_peak2_27_146_0.0868924051815609_7.24311854742714_0.372946200950652 chr15 73173222 73174591 + 0.372946200950652 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 11041 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_27_146_0.0868924051815609_7.24311854742714_0.372946200950652-2 chr6 8638759 8639360 + 0.372946200950652 NA intron (NM_001252266, intron 11 of 11) intron (NM_001252266, intron 11 of 11) 119001 NM_001286729 170772 Mm.210787 NM_133236 ENSMUSG00000029638 Glcci1 2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1 glucocorticoid induced transcript 1 protein-coding common_peak1_436_4597_-0.0177697616075214_12.1579058699144_0.372905952441904 chr10 108160645 108163444 + 0.372905952441904 NA promoter-TSS (NM_027892) promoter-TSS (NM_027892) -356 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak2_114_859_0.03837354138237_9.76737962028064_0.372832962344902 chr17 83845903 83848651 + 0.372832962344902 NA promoter-TSS (NM_025325) promoter-TSS (NM_025325) -487 NM_025325 107766 Mm.30100 NM_025325 ENSMUSG00000000673 Haao 0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding common_peak2_35_224_-0.0824835181580141_7.77253943213803_0.372757407803975 chr1 13426333 13427156 + 0.372757407803975 NA Intergenic Intergenic -52661 NM_008678 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding common_peak2_189_1668_-0.0296861379010309_10.6899251704121_0.372624691280629 chr12 36156050 36158525 + 0.372624691280629 NA promoter-TSS (NM_025840) promoter-TSS (NM_025840) 163 NM_146033 217473 Mm.130422 NM_146033 ENSMUSG00000036188 Ankmy2 AI035571|ZMYND20 ankyrin repeat and MYND domain containing 2 protein-coding common_peak2_78_538_0.0479576283608107_9.09812027693291_0.372622770137489 chr12 70824711 70826306 + 0.372622770137489 NA promoter-TSS (NM_028127) promoter-TSS (NM_028127) -6 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding unique_peak2_53_334_0.0608025926808153_8.41841858168554_0.372570343492668 chr1 85525947 85527978 + 0.372570343492668 NA Intergenic Intergenic 71848 NM_030194 109032 Mm.335802 NM_030194 ENSMUSG00000070034 Sp110 5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1 Sp110 nuclear body protein protein-coding unique_peak2_53_334_0.0608025926808153_8.41841858168554_0.372570343492668-2 chr19 46509647 46511925 + 0.372570343492668 NA intron (NM_053100, intron 1 of 5) B1_Mus2|SINE|Alu 9138 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding common_peak2_51_349_-0.0691775560050409_8.41662233382981_0.372570343492569 chr18 90579066 90580332 + 0.372570343492569 NA Intergenic Intergenic 69545 NM_198295 67988 Mm.268041 NM_198295 ENSMUSG00000024614 Tmx3 6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830 thioredoxin-related transmembrane protein 3 protein-coding unique_peak2_51_349_-0.0691775560050409_8.41662233382981_0.372570343492569 chr17 5802280 5804538 + 0.372570343492569 NA TTS (NR_045081) TTS (NR_045081) 3919 NR_045080 78512 Mm.23696 NR_045079 ENSMUSG00000096965 3300005D01Rik - RIKEN cDNA 3300005D01 gene ncRNA common_peak2_51_349_-0.0691775560050409_8.41662233382981_0.372570343492569-2 chr19 34845710 34847388 + 0.372570343492569 NA intron (NM_001114339, intron 1 of 6) intron (NM_001114339, intron 1 of 6) -25776 NR_029783 723826 NR_029783 ENSMUSG00000065594 Mir107 Mirn107|mir-107|mmu-mir-107 microRNA 107 ncRNA common_peak2_242_2173_0.0243403741188555_11.0983064120867_0.372554754439634 chr3 22075448 22078301 + 0.372554754439634 NA 5' UTR (NM_030732, exon 1 of 16) 5' UTR (NM_030732, exon 1 of 16) 222 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_635_7266_-0.0140432870151734_12.8201225474767_0.372511841465126 chr19 4298860 4306431 + 0.372511841465126 NA intron (NM_001290818, intron 1 of 20) intron (NM_001290818, intron 1 of 20) 3577 NM_130863 110355 Mm.254144 NM_130863 ENSMUSG00000024858 Grk2 Adrbk-1|Adrbk1|Bark-1|beta ARK|betaARK1 G protein-coupled receptor kinase 2 protein-coding common_peak1_232_2063_0.0248843054505947_11.0236694081486_0.372439673007465 chr17 48408204 48409703 + 0.372439673007465 NA intron (NM_001110832, intron 1 of 9) intron (NM_001110832, intron 1 of 9) 867 NM_001110832 18044 Mm.4929 NM_010913 ENSMUSG00000023994 Nfya AA407810|Cbf-b|SEZ-10|SEZ10 nuclear transcription factor-Y alpha protein-coding common_peak1_260_2454_-0.0245749623829195_11.2492198280106_0.372402118777175 chr6 38551414 38553019 + 0.372402118777175 NA intron (NM_001170849, intron 1 of 7) intron (NM_001170849, intron 1 of 7) 772 NM_001170848 192196 Mm.276133 NM_138680 ENSMUSG00000029823 Luc7l2 4930471C18Rik|AA522013|AU015269|CGI59|Cgi74 LUC7-like 2 (S. cerevisiae) protein-coding common_peak1_174_1447_0.0297054143186486_10.5146985942425_0.372374407739168 chr13 14038900 14040373 + 0.372374407739168 NA promoter-TSS (NM_178337) promoter-TSS (NM_178337) 2 NR_130788 70430 Mm.260209 NM_178337 ENSMUSG00000039233 Tbce 2610206D02Rik|C530005D02Rik|pmn tubulin-specific chaperone E protein-coding common_peak2_171_1478_-0.031454544472405_10.5146790648629_0.372374407739168 chr10 61316139 61321171 + 0.372374407739168 NA Intergenic ORR1E|LTR|ERVL-MaLR 20819 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak1_42_251_0.068447246754034_8.01150354687693_0.372295591776786-2 chr5 115484072 115484901 + 0.372295591776786 NA promoter-TSS (NM_001167691) promoter-TSS (NM_001167691) -2 NM_133760 75387 Mm.332616 NM_133760 ENSMUSG00000029524 Sirt4 4930596O17Rik sirtuin 4 protein-coding common_peak1_42_251_0.068447246754034_8.01150354687693_0.372295591776786 chr4 88790660 88791499 + 0.372295591776786 NA promoter-TSS (NM_001161609).8 promoter-TSS (NM_001161609).8 184 NM_001098841 545651 Mm.149203 NM_001098841 ENSMUSG00000101163 Gm13278 OTTMUSG00000011272 predicted gene 13278 protein-coding common_peak2_90_684_-0.0476151351278418_9.39615261028397_0.372125625109291 chr19 11120569 11122228 + 0.372125625109291 NA intron (NM_027058, intron 1 of 6) intron (NM_027058, intron 1 of 6) 9480 NM_027058 69369 Mm.391200 NM_027058 ENSMUSG00000024729 1700017D01Rik - RIKEN cDNA 1700017D01 gene protein-coding common_peak1_90_684_-0.0476151351278418_9.39615261028397_0.372125625109291 chr1 82839355 82840031 + 0.372125625109291 NA 5' UTR (NM_010472, exon 1 of 13) 5' UTR (NM_010472, exon 1 of 13) 233 NM_010472 15463 Mm.392569 NM_010472 ENSMUSG00000026159 Agfg1 AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip ArfGAP with FG repeats 1 protein-coding common_peak1_115_869_0.0370163461491906_9.78337976381069_0.372017894998353 chr11 50133519 50135093 + 0.372017894998353 NA intron (NM_001290759, intron 1 of 21) Arthur1|DNA|hAT-Tip100 2946 NM_029745 76795 Mm.290975 NM_029745 ENSMUSG00000036644 Tbc1d9b - TBC1 domain family, member 9B protein-coding common_peak2_32_180_0.077474060577674_7.53858291737204_0.371861982730166 chr4 40773902 40775139 + 0.371861982730166 NA Intergenic Intergenic -16635 NM_021535 74255 Mm.289929 NM_021535 ENSMUSG00000028409 Smu1 2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) protein-coding unique_peak2_32_180_0.077474060577674_7.53858291737204_0.371861982730166 chr12 112854674 112856065 + 0.371861982730166 NA intron (NM_019925, intron 2 of 2) intron (NM_019925, intron 2 of 2) 5547 NM_019925 56696 Mm.20455 NM_019925 ENSMUSG00000021298 Gpr132 G2a G protein-coupled receptor 132 protein-coding common_peak2_137_1132_-0.0367245143873642_10.1275698886268_0.371796281926581 chr19 6950487 6952803 + 0.371796281926581 NA 3' UTR (NM_007522, exon 4 of 4) 3' UTR (NM_007522, exon 4 of 4) 9083 NM_001285453 12015 Mm.4387 NM_007522 ENSMUSG00000024959 Bad AI325008|Bbc2 BCL2-associated agonist of cell death protein-coding common_peak1_166_1366_0.0299490780818985_10.431772066647_0.371788996306064 chr9 53666566 53667601 + 0.371788996306064 NA exon (NM_027807, exon 1 of 19) exon (NM_027807, exon 1 of 19) 424 NM_001161618 75717 Mm.218910 NM_027807 ENSMUSG00000032030 Cul5 4921514I20Rik|8430423K24Rik|AI852817|C030032G03Rik|C330021I08Rik|VACM-1|VACM1 cullin 5 protein-coding common_peak1_37_215_0.0720890124197782_7.79093200837336_0.371783491539129 chr11 75168417 75169059 + 0.371783491539129 NA promoter-TSS (NM_001098203) promoter-TSS (NM_001098203) -586 NM_001098203 15248 Mm.57250 NM_010430 ENSMUSG00000043099 Hic1 AA408311|HIC-1 hypermethylated in cancer 1 protein-coding common_peak1_23_120_0.0949122308175001_6.96631935268334_0.371683643475057 chr8 125531838 125532397 + 0.371683643475057 NA Intergenic Intergenic -39407 NM_001081337 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding common_peak2_23_120_0.0949122308175001_6.96631935268334_0.371683643475057 chr6 3498331 3498921 + 0.371683643475057 NA intron (NM_024260, intron 1 of 27) intron (NM_024260, intron 1 of 27) 233 NM_001167750 73288 Mm.45539 NM_024260 ENSMUSG00000001376 Vps50 1700034M03Rik|8430415E05Rik|BLM|C87205|Ccdc132|mKIAA1861 VPS50 EARP/GARPII complex subunit protein-coding common_peak2_70_507_-0.0555251409251483_8.96092211630959_0.371672100436907 chr9 63131902 63133496 + 0.371672100436907 NA Intergenic MIR|SINE|MIR 14281 NM_172446 207667 Mm.36349 NM_172446 ENSMUSG00000022245 Skor1 AV273001|C230094B15Rik|Corl1|Lbxcor1 SKI family transcriptional corepressor 1 protein-coding common_peak2_214_1868_0.0257819033871129_10.8809418054387_0.371570751275322 chr5 76139495 76141588 + 0.371570751275322 NA exon (NM_020611, exon 1 of 6) exon (NM_020611, exon 1 of 6) 268 NM_020611 57357 Mm.289446 NM_020611 ENSMUSG00000029233 Srd5a3 1110025P14Rik|A430076C09|AV364670|AW987574|D730040M03Rik|H5ar|S5AR 3|Srd5a2l steroid 5 alpha-reductase 3 protein-coding common_peak2_231_2126_-0.0261040698890369_11.0415522830162_0.371558676754023 chr2 129241915 129246059 + 0.371558676754023 NA Intergenic Intergenic 25018 NR_045838 329513 Mm.473529 NM_177847 ENSMUSG00000056738 A730036I17Rik - RIKEN cDNA A730036I17 gene ncRNA common_peak1_26_159_-0.0997205280477678_7.27206783086348_0.371544738414035 chr4 135545215 135545826 + 0.371544738414035 NA intron (NM_001013756, intron 15 of 15) intron (NM_001013756, intron 15 of 15) 28100 NM_001013756 230824 Mm.331972 NM_001013756 ENSMUSG00000037188 Grhl3 AI561912|Get1|Som|Tfcp2l4|ct grainyhead-like 3 (Drosophila) protein-coding common_peak2_26_159_-0.0997205280477678_7.27206783086348_0.371544738414035 chr10 117873732 117874698 + 0.371544738414035 NA Intergenic MIR|SINE|MIR -28241 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding unique_peak2_15_72_0.10642870424515_6.24303891100259_0.371520254652761-2 chrX 74353081 74353588 + 0.371520254652761 NA exon (NM_025410, exon 1 of 3) exon (NM_025410, exon 1 of 3) 284 NM_025410 66192 Mm.21705 NM_025410 ENSMUSG00000015289 Lage3 1110049G11Rik|Eso3|Itba2 L antigen family, member 3 protein-coding common_peak1_15_72_0.10642870424515_6.24303891100259_0.371520254652761 chr1 51514187 51514661 + 0.371520254652761 NA Intergenic Intergenic -36025 NM_001310549 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding unique_peak2_15_72_0.10642870424515_6.24303891100259_0.371520254652761 chr9 22135338 22136084 + 0.371520254652761 NA promoter-TSS (NM_001102405) promoter-TSS (NM_001102405) 35 NM_001102405 11433 Mm.46354 NM_007388 ENSMUSG00000001348 Acp5 TRACP|TRAP acid phosphatase 5, tartrate resistant protein-coding common_peak1_15_72_0.10642870424515_6.24303891100259_0.371520254652761-2 chr15 86083386 86083717 + 0.371520254652761 NA intron (NM_001205353, intron 1 of 18) intron (NM_001205353, intron 1 of 18) 24824 NM_001205353 223752 Mm.24442 NM_172611 ENSMUSG00000035900 Gramd4 9930016O13 GRAM domain containing 4 protein-coding common_peak1_15_72_0.10642870424515_6.24303891100259_0.371520254652761-3 chr9 63710965 63711363 + 0.371520254652761 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 46830 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_46_309_-0.0729933178482209_8.23962774635013_0.371501305377051-2 chr6 120192892 120194396 + 0.371501305377051 NA intron (NM_016718, intron 1 of 3) (CA)n|Simple_repeat|Simple_repeat 100264 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding common_peak2_46_309_-0.0729933178482209_8.23962774635013_0.371501305377051-3 chr7 142532802 142534061 + 0.371501305377051 NA intron (NM_011288, intron 1 of 4) intron (NM_011288, intron 1 of 4) 314 NM_011288 19935 Mm.12144 NM_011288 ENSMUSG00000037772 Mrpl23 L23mrp|Rpl23|Rpl23l mitochondrial ribosomal protein L23 protein-coding common_peak1_46_309_-0.0729933178482209_8.23962774635013_0.371501305377051 chr11 3649202 3649778 + 0.371501305377051 NA promoter-TSS (NM_001159288) promoter-TSS (NM_001159288) -4 NM_001159288 74522 Mm.139127 NM_198162 ENSMUSG00000034543 Morc2a 8430403M08Rik|Zcwcc1 microrchidia 2A protein-coding common_peak1_46_309_-0.0729933178482209_8.23962774635013_0.371501305377051-2 chr18 67280511 67281579 + 0.371501305377051 NA Intergenic Intergenic -8178 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak2_46_309_-0.0729933178482209_8.23962774635013_0.371501305377051 chr10 17511440 17512871 + 0.371501305377051 NA Intergenic Intergenic -211073 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak2_146_1222_-0.0351979354634189_10.2386097207957_0.371496571878224 chr15 85633827 85635690 + 0.371496571878224 NA Intergenic CpG -52937 NM_009528 22422 Mm.306946 NM_009528 ENSMUSG00000022382 Wnt7b Wnt-7b wingless-type MMTV integration site family, member 7B protein-coding common_peak1_98_757_-0.0445995743569281_9.54375425099263_0.371474414880194 chr7 127207803 127208756 + 0.371474414880194 NA exon (NM_144522, exon 1 of 9) exon (NM_144522, exon 1 of 9) 189 NM_144522 68449 Mm.41420 NM_144522 ENSMUSG00000042492 Tbc1d10b 1110003P22Rik|C87963 TBC1 domain family, member 10b protein-coding common_peak2_132_1030_0.0340716952942515_10.0268644650152_0.37140168111722 chr1 130715254 130718175 + 0.37140168111722 NA promoter-TSS (NM_178691) promoter-TSS (NM_178691) -613 NM_178691 226418 Mm.106553 NM_178691 ENSMUSG00000046404 Yod1 6330564D18Rik|9930028C20Rik|Hshin7 YOD1 deubiquitinase protein-coding common_peak1_155_1313_-0.0335814883417562_10.3429588161515_0.371351376170447 chr7 127470393 127472403 + 0.371351376170447 NA promoter-TSS (NM_145589) promoter-TSS (NM_145589) -216 NM_145589 233895 Mm.44183 NM_145589 ENSMUSG00000030822 Prr14 BC006909 proline rich 14 protein-coding common_peak2_124_953_0.0362753230091926_9.91598311751011_0.371315245400118 chr5 73150036 73154536 + 0.371315245400118 NA intron (NM_028194, intron 3 of 62) B4A|SINE|B4 104332 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_48_296_0.0625571161099181_8.24559767885573_0.371268685337601 chr11 75630926 75631981 + 0.371268685337601 NA intron (NM_008916, intron 1 of 11) intron (NM_008916, intron 1 of 11) 433 NM_008916 19062 Mm.1458 NM_008916 ENSMUSG00000006127 Inpp5k C62|Pps|SKIP inositol polyphosphate 5-phosphatase K protein-coding common_peak2_48_296_0.0625571161099181_8.24559767885573_0.371268685337601-2 chr6 99784740 99786405 + 0.371268685337601 NA Intergenic Intergenic -59180 NM_001170419 50501 Mm.87365 NM_015768 ENSMUSG00000030069 Prok2 Bv8|PK2|Prok1 prokineticin 2 protein-coding common_peak2_48_296_0.0625571161099181_8.24559767885573_0.371268685337601 chr17 64753561 64755045 + 0.371268685337601 NA 3' UTR (NM_008549, exon 22 of 22) 3' UTR (NM_008549, exon 22 of 22) -12808 NR_105051 101202683 Mm.393309 NR_105051 Dreh - down-regulated in hepatocellular carcinoma ncRNA unique_peak2_19_95_0.10617172690962_6.63804836417597_0.371238112422406-2 chr17 51828646 51829360 + 0.371238112422406 NA intron (NM_001163632, intron 1 of 10) intron (NM_001163632, intron 1 of 10) -2415 NM_001163631 20230 Mm.311655 NM_009122 ENSMUSG00000023927 Satb1 2610306G12Rik|AW413156 special AT-rich sequence binding protein 1 protein-coding common_peak2_19_95_0.10617172690962_6.63804836417597_0.371238112422406 chr1 187348136 187348816 + 0.371238112422406 NA exon (NM_026367, exon 10 of 10) exon (NM_026367, exon 10 of 10) 132965 NM_026367 67769 Mm.138321 NM_026367 ENSMUSG00000039210 Gpatch2 5830433G22Rik|5830436K05Rik|AI427714|AI447508|AW107440|AW491060|Gpatc2 G patch domain containing 2 protein-coding common_peak1_19_95_0.10617172690962_6.63804836417597_0.371238112422406-3 chr6 135364883 135365341 + 0.371238112422406 NA intron (NM_001288628, intron 1 of 5) intron (NM_001288628, intron 1 of 5) 2181 NM_001288628 13730 Mm.182785 NM_010128 ENSMUSG00000030208 Emp1 I-8-09|TMP epithelial membrane protein 1 protein-coding unique_peak2_19_95_0.10617172690962_6.63804836417597_0.371238112422406 chr14 19712513 19713340 + 0.371238112422406 NA Intergenic Tigger5b|DNA|TcMar-Tigger -38331 NM_008695 18074 Mm.20348 NM_008695 ENSMUSG00000021806 Nid2 AW547149|Ly111|NID-2|entactin-2|nidogen-2 nidogen 2 protein-coding unique_peak2_19_95_0.10617172690962_6.63804836417597_0.371238112422406-5 chr8 70629517 70630398 + 0.371238112422406 NA exon (NM_011819, exon 2 of 2) exon (NM_011819, exon 2 of 2) 1678 NM_011819 23886 Mm.31325 NM_011819 ENSMUSG00000038508 Gdf15 MIC-1|NAG-1|SBF growth differentiation factor 15 protein-coding common_peak1_19_95_0.10617172690962_6.63804836417597_0.371238112422406 chr14 70076299 70076619 + 0.371238112422406 NA promoter-TSS (NM_018781) promoter-TSS (NM_018781) -986 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding common_peak1_19_95_0.10617172690962_6.63804836417597_0.371238112422406-2 chr3 52007428 52007933 + 0.371238112422406 NA intron (NM_001004176, intron 1 of 4) CpG 97326 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like 3 (Drosophila) protein-coding unique_peak2_19_95_0.10617172690962_6.63804836417597_0.371238112422406-3 chr4 133240809 133241582 + 0.371238112422406 NA exon (NM_016693, exon 1 of 29) exon (NM_016693, exon 1 of 29) 377 NM_016693 53608 Mm.36640 NM_016693 ENSMUSG00000028862 Map3k6 Ask2|MAPKKK6|MEKK6 mitogen-activated protein kinase kinase kinase 6 protein-coding unique_peak2_19_95_0.10617172690962_6.63804836417597_0.371238112422406-4 chr8 27173873 27174735 + 0.371238112422406 NA exon (NM_029423, exon 1 of 5) exon (NM_029423, exon 1 of 5) 342 NM_029423 75767 Mm.205335 NM_029423 ENSMUSG00000031488 Rab11fip1 2010200K21Rik|4833414G05Rik|Rcp RAB11 family interacting protein 1 (class I) protein-coding common_peak2_64_456_-0.0591358347251738_8.80648243769548_0.371152148459867 chr5 62755371 62757572 + 0.371152148459867 NA intron (NM_178407, intron 1 of 32) intron (NM_178407, intron 1 of 32) 9706 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak2_52_356_-0.0640384985859868_8.44776101473611_0.371133153931703-3 chr11 69077425 69079136 + 0.371133153931703 NA Intergenic Intergenic 7471 NM_028336 66910 Mm.33964 NM_025838 ENSMUSG00000020895 Tmem107 1110004B13Rik|2810049P21Rik transmembrane protein 107 protein-coding common_peak1_52_356_-0.0640384985859868_8.44776101473611_0.371133153931703 chr4 137370029 137371006 + 0.371133153931703 NA Intergenic Intergenic -12758 NM_001243769 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding common_peak2_52_356_-0.0640384985859868_8.44776101473611_0.371133153931703-2 chr10 57485801 57487314 + 0.371133153931703 NA promoter-TSS (NR_045353) promoter-TSS (NR_045353) 172 NM_008297 15500 Mm.261395 NM_008297 ENSMUSG00000019878 Hsf2 AI661205 heat shock factor 2 protein-coding common_peak2_52_356_-0.0640384985859868_8.44776101473611_0.371133153931703 chr10 7211506 7212924 + 0.371133153931703 NA promoter-TSS (NM_172546) promoter-TSS (NM_172546) 22 NM_172546 215748 Mm.37984 NM_172546 ENSMUSG00000015202 Cnksr3 6820402C05|BC024086|Magi1 Cnksr family member 3 protein-coding common_peak1_54_342_0.0592262522131026_8.45167789227936_0.370932541806765 chr15 60129386 60130151 + 0.370932541806765 NA Intergenic L1M2|LINE|L1 -113150 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_58_406_-0.0633585792244222_8.63720569465404_0.370870997683766 chr4 126320916 126321721 + 0.370870997683766 NA TTS (NM_011902) TTS (NM_011902) 385 NM_133883 100206 Mm.11285 NM_133883 ENSMUSG00000042558 Adprhl2 AI836109|Arh3 ADP-ribosylhydrolase like 2 protein-coding common_peak2_150_1205_0.0325061930854673_10.2522672884428_0.370860668206142 chr11 67492696 67496876 + 0.370860668206142 NA Intergenic Intergenic -38212 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_216_1889_0.0260477948913405_10.8971944165541_0.370793726514292 chr2 158027835 158029541 + 0.370793726514292 NA 5' UTR (NM_027434, exon 1 of 7) 5' UTR (NM_027434, exon 1 of 7) 191 NM_001291135 70470 Mm.290810 NM_027434 ENSMUSG00000027651 Rprd1b 2610304G08Rik|2810446G03Rik|Crept regulation of nuclear pre-mRNA domain containing 1B protein-coding common_peak1_109_813_0.0390183453060242_9.68839415691926_0.370693194752538 chr16 14162647 14164128 + 0.370693194752538 NA intron (NM_023317, intron 1 of 8) CpG 112 NM_001114085 67203 Mm.24105 NM_023317 ENSMUSG00000022678 Nde1 2810027M15Rik|AU042936|AW822251|Nude|mNudE nudE neurodevelopment protein 1 protein-coding common_peak1_14_80_-0.157805881473276_6.26094706214799_0.370598165309234 chr10 91270598 91270922 + 0.370598165309234 NA Intergenic Intergenic -99141 NM_001080130 21917 Mm.159684 NM_011605 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin protein-coding common_peak1_14_80_-0.157805881473276_6.26094706214799_0.370598165309234-2 chr9 123509319 123509606 + 0.370598165309234 NA intron (NM_013860, intron 2 of 7) T-rich|Low_complexity|Low_complexity -20420 NM_030692 83493 Mm.273671 NM_030692 ENSMUSG00000025240 Sacm1l SAC1|Sac1p|mKIAA0851 SAC1 suppressor of actin mutations 1-like (yeast) protein-coding common_peak1_125_963_0.0353321349081774_9.93055540368405_0.37059470089046 chr7 27541599 27543332 + 0.37059470089046 NA intron (NM_011116, intron 3 of 13) intron (NM_011116, intron 3 of 13) 10647 NM_011116 18807 Mm.6483 NM_011116 ENSMUSG00000003363 Pld3 Sam-9 phospholipase D family, member 3 protein-coding common_peak1_117_888_0.036099107398412_9.81408916252898_0.370519171791781 chr1 92811056 92812927 + 0.370519171791781 NA Intergenic Intergenic -19695 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_87_616_0.0438956859172457_9.29107452210804_0.370409061883736 chr1 138247561 138249836 + 0.370409061883736 NA Intergenic (CA)n|Simple_repeat|Simple_repeat -25040 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak2_217_1900_0.0258117300674403_10.9054486816823_0.370393506224242 chr6 112944583 112949653 + 0.370393506224242 NA 5' UTR (NM_080448, exon 1 of 22) 5' UTR (NM_080448, exon 1 of 22) 148 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak2_178_1489_0.0284479700732447_10.5553206003861_0.370382667726529 chr11 119353659 119356214 + 0.370382667726529 NA promoter-TSS (NM_178743) promoter-TSS (NM_178743) 574 NM_018822 27029 Mm.103788 NM_018822 ENSMUSG00000005043 Sgsh 4632406A19Rik N-sulfoglucosamine sulfohydrolase (sulfamidase) protein-coding common_peak1_31_195_-0.0918442698036843_7.56878770921337_0.370366423859238 chr2 29635672 29636248 + 0.370366423859238 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 16240 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_31_195_-0.0918442698036843_7.56878770921337_0.370366423859238 chr12 86046864 86048197 + 0.370366423859238 NA intron (NM_001081423, intron 33 of 33) intron (NM_001081423, intron 33 of 33) 31511 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak1_151_1216_0.0310876842422285_10.2646572948348_0.370236139163233 chr13 111490232 111490963 + 0.370236139163233 NA promoter-TSS (NM_001122963) promoter-TSS (NM_001122963) -556 NM_001122963 73274 Mm.57286 NM_028487 ENSMUSG00000032745 Gpbp1 1700034P14Rik|AU019836|D230035M11Rik|Gpbp|mGPBP GC-rich promoter binding protein 1 protein-coding common_peak1_78_576_-0.0503284175321657_9.1472632998794_0.370221371262742 chr4 42949589 42950374 + 0.370221371262742 NA Intergenic CpG -3113 NM_019874 56323 Mm.20437 NM_019874 ENSMUSG00000036052 Dnajb5 1110058L06Rik|AI462558|Hsc40|Hsp40-3 DnaJ heat shock protein family (Hsp40) member B5 protein-coding common_peak2_78_576_-0.0503284175321657_9.1472632998794_0.370221371262742 chr5 121583792 121585926 + 0.370221371262742 NA intron (NM_001308450, intron 1 of 10) intron (NM_001308450, intron 1 of 10) 8965 NM_009656 11669 Mm.284446 NM_009656 ENSMUSG00000029455 Aldh2 AHD-M1|ALDH-E2|ALDHI|Ahd-5|Ahd5 aldehyde dehydrogenase 2, mitochondrial protein-coding common_peak1_36_232_-0.0844024934428695_7.82198489793285_0.370217776612694-2 chr2 122368674 122369355 + 0.370217776612694 NA promoter-TSS (NM_001013829) promoter-TSS (NM_001013829) -96 NM_001013829 435684 Mm.458215 NM_001013829 ENSMUSG00000033256 Shf - Src homology 2 domain containing F protein-coding common_peak1_36_232_-0.0844024934428695_7.82198489793285_0.370217776612694 chr11 79528320 79529095 + 0.370217776612694 NA intron (NM_001033711, intron 1 of 1) intron (NM_001033711, intron 1 of 1) 1902 NM_146023 101488212 Mm.439665 NM_146023 ENSMUSG00000070354 Gm21975 Evi2a-evi2b predicted gene 21975 protein-coding common_peak2_491_5311_-0.0162370277555031_12.3669209174692_0.370178707189269 chr2 164910103 164914468 + 0.370178707189269 NA promoter-TSS (NM_199027) promoter-TSS (NM_199027) -535 NM_199027 329559 Mm.330776 NM_199027 ENSMUSG00000039834 Zfp335 1810045J01Rik|NIF-1|Nif1|Znf335 zinc finger protein 335 protein-coding common_peak1_278_2660_-0.0228015579813459_11.3663520160315_0.370177217080819 chr13 33072130 33074605 + 0.370177217080819 NA Intergenic Intergenic -10736 NM_173052 282663 Mm.314490 NM_173052 ENSMUSG00000051029 Serpinb1b 6330533H24Rik|EIB|Serpin1b1|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1b protein-coding common_peak2_43_259_0.0640422408518528_8.05438893345438_0.370147793324208 chr12 100626191 100627496 + 0.370147793324208 NA intron (NM_153587, intron 3 of 17) intron (NM_153587, intron 3 of 17) 98185 NM_153587 73086 Mm.220417 NM_153587 ENSMUSG00000021180 Rps6ka5 3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK|RLSK|S6K-alpha-5 ribosomal protein S6 kinase, polypeptide 5 protein-coding common_peak1_43_259_0.0640422408518528_8.05438893345438_0.370147793324208 chr13 102093484 102094246 + 0.370147793324208 NA Intergenic Intergenic -325648 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_102_750_0.0388787862624671_9.5721084906455_0.370085793815402 chr7 45120975 45122592 + 0.370085793815402 NA promoter-TSS (NR_029560) promoter-TSS (NR_029560) 26 NR_029560 387168 NR_029560 ENSMUSG00000065495 Mir150 Mirn150|mir-150|mmu-mir-150 microRNA 150 ncRNA common_peak1_22_132_-0.11682163140768_6.99687161979735_0.370020505538763 chr6 99262763 99263205 + 0.370020505538763 NA intron (NM_053202, intron 2 of 18) (CA)n|Simple_repeat|Simple_repeat 3531 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_22_132_-0.11682163140768_6.99687161979735_0.370020505538763-2 chr7 127207340 127207790 + 0.370020505538763 NA exon (NM_144522, exon 1 of 9) exon (NM_144522, exon 1 of 9) 903 NM_144522 68449 Mm.41420 NM_144522 ENSMUSG00000042492 Tbc1d10b 1110003P22Rik|C87963 TBC1 domain family, member 10b protein-coding unique_peak2_22_132_-0.11682163140768_6.99687161979735_0.370020505538763 chrX 135738325 135739329 + 0.370020505538763 NA Intergenic B1_Mur1|SINE|Alu -3865 NM_001004359 67298 Mm.271980 NM_026081 ENSMUSG00000043384 Gprasp1 2210415K24Rik|3110031O14Rik|C87852|GASP|GASP1 G protein-coupled receptor associated sorting protein 1 protein-coding common_peak1_305_2891_0.0205657675159792_11.5081347207091_0.369958561355914 chr17 31323501 31327675 + 0.369958561355914 NA intron (NM_153062, intron 8 of 19) intron (NM_153062, intron 8 of 19) 29364 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak1_65_464_-0.0571546471481579_8.83250958242132_0.369920440589674 chr5 107979526 107980479 + 0.369920440589674 NA intron (NM_026062, intron 1 of 4) GA-rich|Low_complexity|Low_complexity 7075 NM_026062 67266 Mm.277897 NM_026062 ENSMUSG00000029270 Fam69a 2900024C23Rik|AI315274 family with sequence similarity 69, member A protein-coding common_peak1_18_105_-0.127556251166308_6.66414232898004_0.369847117739361-2 chr11 86257683 86258130 + 0.369847117739361 NA promoter-TSS (NM_027421) promoter-TSS (NM_027421) -338 NM_027421 70422 Mm.171304 NM_027421 ENSMUSG00000018068 Ints2 2810417D08Rik|AA408260|AI987735|mKIAA1287 integrator complex subunit 2 protein-coding common_peak1_18_105_-0.127556251166308_6.66414232898004_0.369847117739361-5 chr2 167945390 167945823 + 0.369847117739361 NA intron (NM_011201, intron 1 of 8) intron (NM_011201, intron 1 of 8) 13279 NM_011201 19246 Mm.277916 NM_011201 ENSMUSG00000027540 Ptpn1 PTP-1B|PTP-HA2|PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding common_peak1_18_105_-0.127556251166308_6.66414232898004_0.369847117739361-4 chr17 34898073 34898532 + 0.369847117739361 NA promoter-TSS (NM_147151) promoter-TSS (NM_147151) -190 NM_001286575 110147 Mm.35345 NM_145830 ENSMUSG00000013787 Ehmt2 Bat8|D17Ertd710e|G9a|KMT1C|NG36 euchromatic histone lysine N-methyltransferase 2 protein-coding common_peak1_18_105_-0.127556251166308_6.66414232898004_0.369847117739361-3 chr14 73119478 73119926 + 0.369847117739361 NA Intergenic Intergenic -22808 NM_001170694 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak1_18_105_-0.127556251166308_6.66414232898004_0.369847117739361 chr10 99599237 99599548 + 0.369847117739361 NA Intergenic Intergenic -9779 NR_038019 100504202 Mm.403801 NR_038019 Gm20110 - predicted gene, 20110 ncRNA common_peak2_329_3173_0.0199514328903749_11.6420621292804_0.369834063322332 chr11 116851201 116854556 + 0.369834063322332 NA exon (NM_011358, exon 1 of 3) exon (NM_011358, exon 1 of 3) 216 NM_011358 20382 Mm.21841 NM_011358 ENSMUSG00000034120 Srsf2 D11Wsu175e|MRF-1|Pr264|SC35|Sfrs10|Sfrs2 serine/arginine-rich splicing factor 2 protein-coding common_peak2_28_153_0.0818767738176671_7.30772492760373_0.369758951004158-2 chr16 11502801 11503983 + 0.369758951004158 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 97744 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak2_28_153_0.0818767738176671_7.30772492760373_0.369758951004158 chr12 69485413 69486554 + 0.369758951004158 NA Intergenic Intergenic -10433 NR_038061 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak1_28_153_0.0818767738176671_7.30772492760373_0.369758951004158 chr7 30559875 30560579 + 0.369758951004158 NA promoter-TSS (NM_029377) promoter-TSS (NM_029377) -581 NM_001290569 75660 Mm.379242 NM_029377 ENSMUSG00000036845 Lin37 1810054G18Rik lin-37 homolog (C. elegans) protein-coding common_peak1_38_222_0.0720435496875558_7.83692167476408_0.369610725472167 chr18 80629193 80629990 + 0.369610725472167 NA intron (NM_198429, intron 9 of 9) intron (NM_198429, intron 9 of 9) 78582 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding unique_peak2_38_222_0.0720435496875558_7.83692167476408_0.369610725472167 chr15 77808650 77810130 + 0.369610725472167 NA intron (NM_022410, intron 2 of 40) intron (NM_022410, intron 2 of 40) 32785 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_330_3185_0.019861693136761_11.6474613980937_0.369576647154718 chr4 126200898 126205498 + 0.369576647154718 NA promoter-TSS (NM_146153) promoter-TSS (NM_146153) -488 NM_146153 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak2_53_364_-0.0629327757414284_8.48028626589667_0.369559776712357 chr2 24366715 24368374 + 0.369559776712357 NA Intergenic CpG -17853 NM_177611 215632 Mm.490434 NM_177611 ENSMUSG00000026979 Psd4 BC046518|EFA6B pleckstrin and Sec7 domain containing 4 protein-coding common_peak2_392_3937_0.017974382098604_11.9522345869509_0.369539801929432 chr11 53298874 53301890 + 0.369539801929432 NA promoter-TSS (NM_008300) promoter-TSS (NM_008300) 97 NM_008300 15525 Mm.239865 NM_008300 ENSMUSG00000020361 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025 heat shock protein 4 protein-coding common_peak2_59_414_-0.0616987824502271_8.66611813500917_0.369494640362194 chr11 75193190 75195531 + 0.369494640362194 NA intron (NM_177708, intron 1 of 1) CpG 367 NM_177708 237847 Mm.82661 NM_177708 ENSMUSG00000045287 Rtn4rl1 Ngr3|Ngrh2|Ngrl2 reticulon 4 receptor-like 1 protein-coding common_peak1_59_414_-0.0616987824502271_8.66611813500917_0.369494640362194 chr14 121035296 121036290 + 0.369494640362194 NA 5' UTR (NM_134082, exon 1 of 27) 5' UTR (NM_134082, exon 1 of 27) 219 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding common_peak1_59_414_-0.0616987824502271_8.66611813500917_0.369494640362194-2 chr6 88084282 88085274 + 0.369494640362194 NA exon (NM_133933, exon 1 of 10) exon (NM_133933, exon 1 of 10) 305 NM_133933 103963 Mm.188544 NM_133933 ENSMUSG00000030062 Rpn1 AU018702|D6Wsu137e|Rpn-1 ribophorin I protein-coding common_peak1_74_505_0.0471561335953563_9.00657164149199_0.369472896029122 chr5 30647374 30648536 + 0.369472896029122 NA promoter-TSS (NR_049199) promoter-TSS (NR_049199) 16 NM_175675 74919 Mm.247985 NM_175675 ENSMUSG00000029175 Slc35f6 4930471M23Rik|5730478O19Rik|ANT2BP|P40|Tango9 solute carrier family 35, member F6 protein-coding common_peak2_88_625_0.04299952183157_9.3115186078484_0.36942565464968 chr5 36464985 36465996 + 0.36942565464968 NA promoter-TSS (NR_126490) promoter-TSS (NR_126490) 305 NM_024478 17713 Mm.21535 NM_024478 ENSMUSG00000029198 Grpel1 AA408748|mt-GrpE#1|mt-Grpel1 GrpE-like 1, mitochondrial protein-coding common_peak2_141_1171_-0.0349849973888752_10.1772643557278_0.369411821886509 chr9 21954950 21956764 + 0.369411821886509 NA non-coding (NR_132099, exon 1 of 1) non-coding (NR_132099, exon 1 of 1) 104 NM_025870 66962 Mm.46647 NM_025870 ENSMUSG00000051238 Swsap1 2310047B19Rik SWIM type zinc finger 7 associated protein 1 protein-coding common_peak1_55_350_0.0578498408997206_8.48425214075442_0.369368056847582 chr15 78934794 78935533 + 0.369368056847582 NA intron (NM_133800, intron 1 of 5) CpG 230 NM_133800 97961 Mm.157216 NM_133800 ENSMUSG00000033099 Nol12 C78541|Nop25 nucleolar protein 12 protein-coding common_peak2_168_1446_-0.031035358002315_10.4833315275306_0.369316542103177 chr19 40706891 40709951 + 0.369316542103177 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 48651 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak1_127_982_0.0350425903436555_9.95856890151241_0.369265591098253 chr1 16687759 16689066 + 0.369265591098253 NA promoter-TSS (NM_016923) promoter-TSS (NM_016923) -44 NM_001159711 17087 Mm.116844 NM_016923 ENSMUSG00000025779 Ly96 ESOP-1|MD-2|MD2 lymphocyte antigen 96 protein-coding common_peak2_252_2285_0.0232325290068847_11.1702259527179_0.369077775610819 chr5 121833104 121838024 + 0.369077775610819 NA intron (NM_001306127, intron 1 of 8) intron (NM_001306127, intron 1 of 8) 540 NM_001306126 16923 Mm.65493 NM_008507 ENSMUSG00000042594 Sh2b3 AI429800|Lnk SH2B adaptor protein 3 protein-coding common_peak2_101_784_-0.0422657554651771_9.5954159660464_0.36901370330979 chr16 52125088 52127251 + 0.36901370330979 NA intron (NM_001033238, intron 4 of 17) intron (NM_001033238, intron 4 of 17) 94620 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_178_1551_-0.0303682567643584_10.5847287138049_0.368982468042908 chr7 55961677 55962965 + 0.368982468042908 NA promoter-TSS (NR_015495) promoter-TSS (NR_015495) 172 NM_001256133 93790 Mm.37249 NM_023647 ENSMUSG00000030452 Nipa2 2600017P10Rik|3830408P04Rik|AB041581 non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human) protein-coding common_peak2_231_2053_0.0242797817534406_11.0163603571949_0.368974555674933 chr11 53856885 53860165 + 0.368974555674933 NA intron (NR_033332, intron 1 of 3) intron (NR_033332, intron 1 of 3) 731 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA common_peak2_136_1069_0.0329424752463492_10.0798663189117_0.368865054246127 chr2 4565969 4569109 + 0.368865054246127 NA intron (NM_001177843, intron 13 of 23) intron (NM_001177843, intron 13 of 23) 7785 NM_001177844 209630 Mm.37932 NM_172475 ENSMUSG00000026657 Frmd4a 2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294 FERM domain containing 4A protein-coding common_peak1_136_1069_0.0329424752463492_10.0798663189117_0.368865054246127 chr2 174472019 174473792 + 0.368865054246127 NA promoter-TSS (NM_025531) promoter-TSS (NM_025531) 36 NM_025531 66390 Mm.182294 NM_025531 ENSMUSG00000016257 Slmo2 2310042G06Rik|AA407013|Prelid3b slowmo homolog 2 (Drosophila) protein-coding common_peak2_68_455_0.0497053060820534_8.85774266720577_0.368731258501347 chr17 34397880 34399399 + 0.368731258501347 NA promoter-TSS (NM_001163855) promoter-TSS (NM_001163855) -181 NM_001001177 407788 Mm.73205 NM_001001177 ENSMUSG00000057246 BC051142 NG8|TSBP|Tesb|Tesbp cDNA sequence BC051142 protein-coding common_peak2_94_720_-0.0453856589656105_9.47116261975802_0.368517965442155 chr3 68782914 68784257 + 0.368517965442155 NA Intergenic Intergenic -86001 NM_001167996 68725 Mm.45741 NM_001167996 ENSMUSG00000046999 1110032F04Rik AI115547 RIKEN cDNA 1110032F04 gene protein-coding unique_peak2_27_166_-0.0971395424561265_7.33513452124599_0.368477871353519 chr12 25305466 25306827 + 0.368477871353519 NA Intergenic Intergenic 176972 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak2_11_61_-0.167033153481135_5.87067973364631_0.368450600203475 chr11 4095226 4095719 + 0.368450600203475 NA promoter-TSS (NM_026443) promoter-TSS (NM_026443) -41 NM_026443 67900 Mm.41719 NM_026443 ENSMUSG00000004748 Mtfp1 1700020C11Rik|2610507A21Rik|AV005788|Mtp18 mitochondrial fission process 1 protein-coding unique_peak2_11_61_-0.167033153481135_5.87067973364631_0.368450600203475-2 chr11 64020440 64021042 + 0.368450600203475 NA intron (NM_178379, intron 4 of 6) (TG)n|Simple_repeat|Simple_repeat 56515 NR_131111 78883 Mm.410764 NR_131111 ENSMUSG00000086359 9630013K17Rik - RIKEN cDNA 9630013K17 gene ncRNA common_peak1_12_55_0.121454011396973_5.86808192775609_0.368450600203463 chr2 147023891 147024283 + 0.368450600203463 NA intron (NM_011917, intron 1 of 29) intron (NM_011917, intron 1 of 29) 11027 NM_011917 24128 Mm.3065 NM_011917 ENSMUSG00000027433 Xrn2 - 5'-3' exoribonuclease 2 protein-coding common_peak2_112_841_0.0378430751060055_9.7365979606194_0.368404995438456 chr8 57399957 57403385 + 0.368404995438456 NA Intergenic Intergenic -54252 NM_009136 20284 Mm.12886 NM_009136 ENSMUSG00000031610 Scrg1 AW124307 scrapie responsive gene 1 protein-coding common_peak2_44_266_0.0654827058770771_8.09343728462609_0.368371948961148 chr13 62684405 62685522 + 0.368371948961148 NA Intergenic Intergenic -60781 NM_173381 211378 Mm.247448 NM_173381 ENSMUSG00000072066 6720489N17Rik 9330128I06 RIKEN cDNA 6720489N17 gene protein-coding common_peak2_356_3591_-0.0193647483482202_11.800889260567_0.36825938940741 chr12 102316461 102322145 + 0.36825938940741 NA intron (NM_001161365, intron 2 of 9) intron (NM_001161365, intron 2 of 9) 35662 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_60_422_-0.0599944020729772_8.69451665208346_0.368171485727037 chr17 17004993 17005789 + 0.368171485727037 NA Intergenic Intergenic -58712 NM_001005358 449000 Mm.483718 NM_001005358 ENSMUSG00000096696 Zfp960 - zinc finger protein 960 protein-coding common_peak2_48_324_-0.0674196710051316_8.31058607241325_0.368166145176485 chr12 54397488 54399341 + 0.368166145176485 NA Intergenic Intergenic -7096 NR_033689 665239 Mm.26856 NR_033689 Gm7550 EG665239|Gm666 predicted gene 7550 ncRNA common_peak1_118_945_-0.0386240030997502_9.86638437178952_0.368061217246749-2 chr9 7762747 7763887 + 0.368061217246749 NA promoter-TSS (NM_133739) promoter-TSS (NM_133739) -760 NM_133739 71929 Mm.283293 NM_133739 ENSMUSG00000050912 Tmem123 2310075C12Rik transmembrane protein 123 protein-coding common_peak1_118_945_-0.0386240030997502_9.86638437178952_0.368061217246749 chr2 93452351 93454278 + 0.368061217246749 NA promoter-TSS (NM_001271462) promoter-TSS (NM_001271462) 495 NR_040533 100038525 Mm.440596 NR_040532 ENSMUSG00000075025 Gm10804 ENSMUSG00000075025 predicted gene 10804 ncRNA common_peak2_193_1645_0.0272020541281393_10.6983496474857_0.367966242996427 chr7 98814816 98817486 + 0.367966242996427 NA Intergenic (CCCCG)n|Simple_repeat|Simple_repeat -18961 NM_001285794 22411 Mm.22182 NM_009519 ENSMUSG00000015957 Wnt11 - wingless-type MMTV integration site family, member 11 protein-coding common_peak1_97_705_0.0399641748258599_9.48350646068411_0.367951987785123 chr19 61140247 61141477 + 0.367951987785123 NA promoter-TSS (NM_001309216) promoter-TSS (NM_001309216) -22 NR_131954 414758 Mm.100056 NM_001001737 ENSMUSG00000074733 Zfp950 5830428H23Rik|AU016073|BC055757|Gm34518|Zfp826|mszf84 zinc finger protein 950 protein-coding unique_peak2_24_127_0.0860151921363839_7.04300759606819_0.367921102240715 chr1 80641326 80642013 + 0.367921102240715 NA intron (NM_001285927, intron 2 of 55) intron (NM_001285927, intron 2 of 55) 23683 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding unique_peak2_24_127_0.0860151921363839_7.04300759606819_0.367921102240715-2 chrX 48694558 48695528 + 0.367921102240715 NA promoter-TSS (NM_173376) promoter-TSS (NM_173376) 39 NM_173376 209003 Mm.32561 NM_173376 ENSMUSG00000031107 Rbmx2 2700089A17Rik|2810411A03Rik|CGI-79 RNA binding motif protein, X-linked 2 protein-coding unique_peak2_5_28_-0.297430149408187_4.70926592042348_0.367910579842127 chr4 51812457 51812683 + 0.367910579842127 NA Intergenic U1|snRNA|snRNA 238540 NR_040668 329844 Mm.128934 NR_040668 ENSMUSG00000085515 C630028M04Rik - RIKEN cDNA C630028M04 gene ncRNA common_peak2_234_2086_0.024021789144502_11.0392257797321_0.367908859085654 chr19 23139917 23142569 + 0.367908859085654 NA promoter-TSS (NM_010638) promoter-TSS (NM_010638) 17 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971 Kruppel-like factor 9 protein-coding common_peak2_32_202_-0.0880159695242968_7.62132793242303_0.367895766599939 chr1 72306851 72308061 + 0.367895766599939 NA promoter-TSS (NM_009533) promoter-TSS (NM_009533) 35 NM_009533 22596 Mm.246952 NM_009533 ENSMUSG00000026187 Xrcc5 AI314015|Ku80|Ku86 X-ray repair complementing defective repair in Chinese hamster cells 5 protein-coding common_peak1_32_202_-0.0880159695242968_7.62132793242303_0.367895766599939 chr14 122200457 122201169 + 0.367895766599939 NA intron (NM_029556, intron 1 of 7) intron (NM_029556, intron 1 of 7) 19119 NM_029556 69634 Mm.34608 NM_029556 ENSMUSG00000025545 Clybl 0610033J05Rik|2310014M14Rik|AI256068|Clb citrate lyase beta like protein-coding common_peak1_50_312_0.0576519301948384_8.31884481203004_0.367745161084741 chr9 42028512 42029428 + 0.367745161084741 NA intron (NM_011436, intron 21 of 47) intron (NM_011436, intron 21 of 47) 95319 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak1_105_777_0.0387277316432755_9.62299021080783_0.367719512313697 chr12 54998443 54999801 + 0.367719512313697 NA Intergenic Intergenic -12786 NM_013815 217578 Mm.479583 NM_013815 ENSMUSG00000035021 Baz1a Acf1|B930060C03|BC065123|Gtl5|Wcrf180|cbp146 bromodomain adjacent to zinc finger domain 1A protein-coding common_peak2_105_777_0.0387277316432755_9.62299021080783_0.367719512313697 chr16 62785879 62787702 + 0.367719512313697 NA promoter-TSS (NM_178925) promoter-TSS (NM_178925) -74 NM_178925 106338 Mm.26321 NM_178925 ENSMUSG00000050312 Nsun3 6720484A09Rik|AU022521 NOL1/NOP2/Sun domain family member 3 protein-coding common_peak1_138_1088_0.0331965420756948_10.1053865097548_0.367694367107359 chr18 6135349 6136987 + 0.367694367107359 NA promoter-TSS (NM_029277) promoter-TSS (NM_029277) -70 NM_001039692 75415 Mm.239675 NM_029277 ENSMUSG00000041225 Arhgap12 2810011M08Rik Rho GTPase activating protein 12 protein-coding common_peak1_113_851_0.0364014105106936_9.75291032548119_0.367623789454154 chr1 21342646 21344244 + 0.367623789454154 NA Intergenic B1_Mur1|SINE|Alu -6232 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak2_113_851_0.0364014105106936_9.75291032548119_0.367623789454154 chr15 85981079 85982984 + 0.367623789454154 NA intron (NM_009886, intron 1 of 34) intron (NM_009886, intron 1 of 34) 51746 NM_009886 12614 Mm.22680 NM_009886 ENSMUSG00000016028 Celsr1 Adgrc1|Crsh|Scy|crash cadherin, EGF LAG seven-pass G-type receptor 1 protein-coding common_peak2_69_463_0.0500770305823171_8.88301951041873_0.367582437091475 chr11 62494356 62496293 + 0.367582437091475 NA intron (NM_001039536, intron 2 of 6) intron (NM_001039536, intron 2 of 6) 36864 NM_001039536 327942 Mm.390358 NM_199026 ENSMUSG00000014245 Pigl Gm737 phosphatidylinositol glycan anchor biosynthesis, class L protein-coding common_peak2_204_1762_0.0257320926235654_10.796682805632_0.367512069823776 chr3 88949245 88952095 + 0.367512069823776 NA promoter-TSS (NM_001164533) promoter-TSS (NM_001164533) -388 NM_001164533 65111 Mm.29028 NM_022994 ENSMUSG00000068921 Dap3 4921514D13Rik|DAP-3|MRP-S29|S29mt death associated protein 3 protein-coding common_peak2_67_481_-0.0561284528830779_8.88482510978842_0.367441570150244 chr11 78825635 78827308 + 0.367441570150244 NA promoter-TSS (NM_001076681) promoter-TSS (NM_001076681) -124 NM_001076681 66274 Mm.258932 NM_001076681 ENSMUSG00000072640 Lyrm9 1810012P15Rik LYR motif containing 9 protein-coding common_peak2_360_3640_-0.0191946370304787_11.8205217069293_0.367348484665704 chr5 21409535 21415743 + 0.367348484665704 NA intron (NM_029195, intron 1 of 18) intron (NM_029195, intron 1 of 18) 12038 NM_029195 75172 Mm.426695 NM_029195 ENSMUSG00000064280 Ccdc146 4930528G09Rik|mKIAA1505 coiled-coil domain containing 146 protein-coding common_peak2_88_665_-0.0463599983070733_9.35619836791772_0.367337072740627 chr11 108247481 108249873 + 0.367337072740627 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 95211 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak2_39_230_0.0659974974010753_7.8847477901166_0.36728544508453 chr14 61619556 61620727 + 0.36728544508453 NA intron (NR_028264, intron 5 of 6) ID_B1|SINE|B4 11831 NR_029734 387134 NR_029734 ENSMUSG00000092995 Mir16-1 Mirn16|Mirn16-1|miR-16|mir-16-1 microRNA 16-1 ncRNA common_peak1_39_230_0.0659974974010753_7.8847477901166_0.36728544508453-3 chr2 5950418 5950982 + 0.36728544508453 NA promoter-TSS (NM_001081132) promoter-TSS (NM_001081132) -769 NM_001081132 326622 Mm.31102 NM_001081132 ENSMUSG00000043241 Upf2 - UPF2 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak1_39_230_0.0659974974010753_7.8847477901166_0.36728544508453 chr1 184845985 184846797 + 0.36728544508453 NA promoter-TSS (NM_133684) promoter-TSS (NM_133684) -544 NM_133684 67247 Mm.177724 NM_133684 ENSMUSG00000073481 Marc2 2810484M10Rik|Mosc2|mARC1 mitochondrial amidoxime reducing component 2 protein-coding common_peak1_39_230_0.0659974974010753_7.8847477901166_0.36728544508453-2 chr19 37433983 37434724 + 0.36728544508453 NA promoter-TSS (NM_008245) promoter-TSS (NM_008245) -488 NM_008245 15242 Mm.33896 NM_008245 ENSMUSG00000024986 Hhex Hex|Hex1|Hhex-rs2|Prh|Prhx hematopoietically expressed homeobox protein-coding common_peak2_136_1121_-0.0355194040739342_10.1140972585718_0.367273182915412 chr12 83631280 83633362 + 0.367273182915412 NA promoter-TSS (NM_027349) promoter-TSS (NM_027349) 87 NM_027349 67039 Mm.46005 NM_027349 ENSMUSG00000010608 Rbm25 2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7 RNA binding motif protein 25 protein-coding common_peak2_163_1394_-0.0313815192784119_10.4303586470773_0.367222164027561 chr10 41449402 41451137 + 0.367222164027561 NA promoter-TSS (NM_001277229) promoter-TSS (NM_001277229) -89 NM_001277229 268294 Mm.258475 NM_153398 ENSMUSG00000019826 Zbtb24 BC055367|Bif1|Bsg1|ZNF450 zinc finger and BTB domain containing 24 protein-coding common_peak1_81_602_-0.0479586156483016_9.21203488407593_0.367184859041699 chr1 85597882 85599202 + 0.367184859041699 NA intron (NM_030194, intron 1 of 11) intron (NM_030194, intron 1 of 11) 268 NM_030194 109032 Mm.335802 NM_030194 ENSMUSG00000070034 Sp110 5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1 Sp110 nuclear body protein protein-coding common_peak2_148_1186_0.0318207824657151_10.2290146108748_0.367017357379347 chr7 118128410 118131021 + 0.367017357379347 NA promoter-TSS (NM_019419) promoter-TSS (NM_019419) -90 NM_019419 54208 Mm.29924 NM_019419 ENSMUSG00000030654 Arl6ip1 AIP-6|AL022945|ARMER|AU042858|Aip-1|Arl6ip|C85138|mKIAA0069 ADP-ribosylation factor-like 6 interacting protein 1 protein-coding common_peak1_106_786_0.0387505938482864_9.63959512243163_0.366966383100613 chr17 24894610 24896452 + 0.366966383100613 NA promoter-TSS (NM_019730) promoter-TSS (NM_019730) 411 NM_023260 79044 Mm.328851 NM_023260 ENSMUSG00000038880 Mrps34 0610007F04Rik|5330430D13Rik|AV001970|Tce2 mitochondrial ribosomal protein S34 protein-coding common_peak1_43_285_-0.0734612828980818_8.12314069532935_0.36692086846204 chr12 86859633 86860289 + 0.36692086846204 NA Intergenic Intergenic 24853 NM_145836 238330 Mm.248358 NM_145836 ENSMUSG00000034168 Irf2bpl 6430527G18Rik|Eap1 interferon regulatory factor 2 binding protein-like protein-coding common_peak1_43_285_-0.0734612828980818_8.12314069532935_0.36692086846204-2 chr5 118474321 118475085 + 0.36692086846204 NA Intergenic Intergenic -86016 NM_172424 76199 Mm.206238 NM_172424 ENSMUSG00000018076 Med13l 2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025 mediator complex subunit 13-like protein-coding common_peak2_23_138_-0.105165604631413_7.0663582704078_0.366918605579119 chr17 27996688 27997599 + 0.366918605579119 NA intron (NM_001286040, intron 11 of 24) intron (NM_001286040, intron 11 of 24) 83441 NM_013687 21463 Mm.29758 NM_013687 ENSMUSG00000062859 Tcp11 D17Ken1|Tcp-11 t-complex protein 11 protein-coding common_peak1_23_138_-0.105165604631413_7.0663582704078_0.366918605579119 chr2 45173199 45173767 + 0.366918605579119 NA Intergenic Intergenic -60204 NM_015753 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak2_63_414_0.0525103592635929_8.72322270586608_0.36689850728528 chr1 92641029 92642193 + 0.36689850728528 NA non-coding (NR_028108, exon 1 of 3) non-coding (NR_028108, exon 1 of 3) 337 NR_028108 66915 Mm.30179 NM_001163425 ENSMUSG00000073616 Myeov2 1110002M09Rik|Cops9 myeloma overexpressed 2 protein-coding unique_peak2_61_430_-0.0582495431684364_8.72241928750488_0.36689850728528 chr5 113814525 113817258 + 0.36689850728528 NA Intergenic Intergenic 14610 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak1_34_194_0.0741154007739233_7.64438801413657_0.366890009473476-3 chr6 83120884 83121495 + 0.366890009473476 NA TTS (NM_023547) TTS (NM_023547) 272 NM_001083923 22377 Mm.1109 NM_016757 ENSMUSG00000030035 Wbp1 AI255152 WW domain binding protein 1 protein-coding common_peak1_34_194_0.0741154007739233_7.64438801413657_0.366890009473476 chr17 36023846 36024448 + 0.366890009473476 NA intron (NR_015618, intron 1 of 1) intron (NR_015618, intron 1 of 1) -3587 NM_008207 15042 Mm.439654 NM_008207 ENSMUSG00000053835 H2-T24 H-2T24 histocompatibility 2, T region locus 24 protein-coding common_peak1_34_194_0.0741154007739233_7.64438801413657_0.366890009473476-2 chr2 58154056 58154619 + 0.366890009473476 NA intron (NM_139200, intron 1 of 7) AT_rich|Low_complexity|Low_complexity 5785 NM_139200 227929 Mm.273905 NM_139200 ENSMUSG00000026832 Cytip A130053M09Rik|AI462064|C80816|Cbp|Cybr|Pscdbp cytohesin 1 interacting protein protein-coding common_peak2_270_2488_0.0221170183663713_11.2924090241642_0.36688927435146 chr4 132973535 132978489 + 0.36688927435146 NA intron (NM_010208, intron 1 of 12) intron (NM_010208, intron 1 of 12) 1917 NM_010208 14191 Mm.271665 NM_010208 ENSMUSG00000028874 Fgr - FGR proto-oncogene, Src family tyrosine kinase protein-coding common_peak1_29_160_0.0777395544830863_7.36978665535616_0.366842264329488-2 chr4 6218988 6219533 + 0.366842264329488 NA 3' UTR (NM_026534, exon 8 of 8) 3' UTR (NM_026534, exon 8 of 8) 28155 NM_026534 68053 Mm.404043 NM_026534 ENSMUSG00000028243 Ubxn2b 3110003A22Rik|6430407D20Rik|AI451665|p37 UBX domain protein 2B protein-coding common_peak2_29_160_0.0777395544830863_7.36978665535616_0.366842264329488 chr11 97803034 97804087 + 0.366842264329488 NA intron (NM_010688, intron 1 of 6) ID|SINE|ID 3888 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak2_29_160_0.0777395544830863_7.36978665535616_0.366842264329488-2 chr9 118512166 118513568 + 0.366842264329488 NA intron (NM_018748, intron 1 of 23) intron (NM_018748, intron 1 of 23) 6549 NM_018748 54214 Mm.10409 NM_018748 ENSMUSG00000038708 Golga4 AI225887|AU019508|Olp-1 golgi autoantigen, golgin subfamily a, 4 protein-coding common_peak1_29_160_0.0777395544830863_7.36978665535616_0.366842264329488 chr1 59684376 59684813 + 0.366842264329488 NA promoter-TSS (NM_018868) promoter-TSS (NM_018868) -412 NM_018868 55989 Mm.220367 NM_018868 ENSMUSG00000026020 Nop58 MSSP|Nol5|SIK|nop5 NOP58 ribonucleoprotein protein-coding common_peak2_186_1572_0.0276147186863369_10.6331103147589_0.366756551343933 chr12 80642867 80644954 + 0.366756551343933 NA promoter-TSS (NM_026244) promoter-TSS (NM_026244) -49 NM_007951 13877 Mm.246551 NM_007951 ENSMUSG00000021131 Erh Mer|Prei1 enhancer of rudimentary homolog (Drosophila) protein-coding common_peak2_183_1603_-0.0291606888023406_10.6328780820538_0.366756551343933 chr7 55961345 55963207 + 0.366756551343933 NA promoter-TSS (NR_015495) promoter-TSS (NR_015495) 217 NM_001256133 93790 Mm.37249 NM_023647 ENSMUSG00000030452 Nipa2 2600017P10Rik|3830408P04Rik|AB041581 non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human) protein-coding common_peak2_546_5922_0.0142176108698262_12.5392211762299_0.366699802238977 chr7 90128489 90135671 + 0.366699802238977 NA intron (NM_001252520, intron 1 of 20) intron (NM_001252520, intron 1 of 20) 1848 NM_001252520 233489 Mm.235175 NM_146194 ENSMUSG00000039361 Picalm CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114 phosphatidylinositol binding clathrin assembly protein protein-coding common_peak2_91_652_0.0407462449197915_9.37131230400633_0.366635886883925 chr18 42511367 42512643 + 0.366635886883925 NA intron (NM_001289526, intron 1 of 21) CpG 518 NR_110344 56070 Mm.270511 NM_001039474 ENSMUSG00000024498 Tcerg1 2410022J09Rik|2900090C16Rik|AI428505|CA150b|FBP23|FBP28|Taf2s|ca150|p144 transcription elongation regulator 1 (CA150) protein-coding common_peak1_91_652_0.0407462449197915_9.37131230400633_0.366635886883925 chr1 64616461 64618017 + 0.366635886883925 NA promoter-TSS (NM_025964) promoter-TSS (NM_025964) -71 NM_025964 67099 Mm.46394 NM_025964 ENSMUSG00000025956 Mettl21a 2310038H17Rik|AI464204|Fam119a methyltransferase like 21A protein-coding common_peak2_55_380_-0.0604701262890401_8.5434121243488_0.366615808853121 chr2 118388356 118389459 + 0.366615808853121 NA promoter-TSS (NM_001177806) promoter-TSS (NM_001177806) -205 NM_001177806 27103 Mm.217616 NM_013719 ENSMUSG00000005102 Eif2ak4 2610011M03|GCN2|MGCN2 eukaryotic translation initiation factor 2 alpha kinase 4 protein-coding unique_peak2_20_102_0.0909741166152793_6.73198758549086_0.366599446653044 chr5 32112229 32113064 + 0.366599446653044 NA Intergenic Intergenic -23826 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak1_20_102_0.0909741166152793_6.73198758549086_0.366599446653044 chr2 181188055 181188453 + 0.366599446653044 NA exon (NM_025598, exon 5 of 5) exon (NM_025598, exon 5 of 5) 911 NM_025598 66496 Mm.213943 NM_025598 ENSMUSG00000016344 Ppdpf 0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik pancreatic progenitor cell differentiation and proliferation factor protein-coding common_peak2_20_102_0.0909741166152793_6.73198758549086_0.366599446653044 chr9 92267077 92267822 + 0.366599446653044 NA promoter-TSS (NR_105808) promoter-TSS (NR_105808) -88 NR_105808 102465203 NR_105808 ENSMUSG00000098766 Mir6386 Gm27842|mmu-mir-6386 microRNA 6386 ncRNA common_peak1_306_2903_0.0203655339043856_11.5140085049479_0.366531197107487 chr12 80790516 80791846 + 0.366531197107487 NA intron (NM_178682, intron 1 of 5) CpG 649 NM_001242419 217684 Mm.341776 NM_178682 ENSMUSG00000021133 Susd6 4933426M11Rik|mKIAA0247 sushi domain containing 6 protein-coding common_peak2_49_332_-0.0667508637485206_8.346002935197_0.36651330418535 chr18 11930446 11932518 + 0.36651330418535 NA intron (NM_022021, intron 6 of 8) intron (NM_022021, intron 6 of 8) -91044 NR_035447 100316686 NR_035447 ENSMUSG00000084565 Mir1901 Mirn1901|mmu-mir-1901 microRNA 1901 ncRNA common_peak1_260_2376_0.0220061588767013_11.2259292673808_0.366492188781431 chr10 62542835 62544900 + 0.366492188781431 NA Intergenic Intergenic 34590 NM_028197 72320 Mm.258955 NM_028197 ENSMUSG00000036955 Kif1bp 0710007C18Rik|2510003E04Rik|KBP|mKIAA1279 KIF1 binding protein protein-coding common_peak1_9_39_0.142593821557057_5.39322500566589_0.36647540798597 chr17 47011401 47011618 + 0.36647540798597 NA promoter-TSS (NM_001177374) promoter-TSS (NM_001177374) -977 NM_001177374 224826 Mm.28234 NM_146078 ENSMUSG00000023977 Ubr2 9930021A08Rik|AI462103|AW540746|E130209G04Rik|ENSMUSG00000043296|mKIAA0349 ubiquitin protein ligase E3 component n-recognin 2 protein-coding common_peak2_45_274_0.0617853068678436_8.13418046184594_0.366450973893004 chr5 113858569 113860003 + 0.366450973893004 NA intron (NM_011779, intron 3 of 10) intron (NM_011779, intron 3 of 10) -28785 NM_009151 20345 Mm.332590 NM_009151 ENSMUSG00000048163 Selplg CD162|Psgl-1|Psgl1|Selp1|Selpl selectin, platelet (p-selectin) ligand protein-coding common_peak1_57_366_0.0556393728557119_8.54745593927107_0.366440187320014 chr15 82364338 82365144 + 0.366440187320014 NA Intergenic MMVL30-int|LTR|ERV1 -10450 NM_025987 67130 Mm.27570 NM_025987 ENSMUSG00000022450 Ndufa6 14kDa|2700038D15Rik|B230217P19Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14) protein-coding common_peak1_57_366_0.0556393728557119_8.54745593927107_0.366440187320014-2 chr7 4739128 4739719 + 0.366440187320014 NA promoter-TSS (NM_001115018) promoter-TSS (NM_001115018) -704 NM_146177 232811 Mm.247844 NM_146177 ENSMUSG00000059851 Kmt5c BC024816|Suv4-20h2|Suv420h2 lysine methyltransferase 5C protein-coding common_peak1_68_489_-0.0540426187557763_8.90961662962468_0.366335746017529 chr6 83032825 83033933 + 0.366335746017529 NA promoter-TSS (NM_013586) promoter-TSS (NM_013586) 92 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding unique_peak2_16_78_0.0997555127970688_6.35365850457564_0.366327466620127 chr2 157129505 157130217 + 0.366327466620127 NA exon (NM_018851, exon 2 of 16) exon (NM_018851, exon 2 of 16) 5361 NM_001139520 56045 Mm.248478 NM_018851 ENSMUSG00000027639 Samhd1 E330031J07Rik|Mg11 SAM domain and HD domain, 1 protein-coding common_peak1_16_78_0.0997555127970688_6.35365850457564_0.366327466620127 chr11 75510311 75510767 + 0.366327466620127 NA intron (NM_001029938, intron 2 of 7) CpG 445 NM_001029938 280408 Mm.41416 NM_001029938 ENSMUSG00000038195 Rilp AI835553|Gm857 Rab interacting lysosomal protein protein-coding common_peak2_99_723_0.0393939274258894_9.51954285079615_0.366309616708278 chr18 64515804 64517376 + 0.366309616708278 NA promoter-TSS (NM_027350) promoter-TSS (NM_027350) -33 NM_001142950 70223 Mm.29192 NM_027350 ENSMUSG00000024587 Nars 3010001M15Rik|AA960128|ASNRS|C78150 asparaginyl-tRNA synthetase protein-coding common_peak1_38_246_-0.0754237819768173_7.91065534059627_0.366180955497686 chr16 19985004 19985891 + 0.366180955497686 NA Intergenic Lx9|LINE|L1 -2398 NM_183390 239743 Mm.86699 NM_183390 ENSMUSG00000043008 Klhl6 - kelch-like 6 protein-coding common_peak2_38_246_-0.0754237819768173_7.91065534059627_0.366180955497686 chr5 115166466 115168100 + 0.366180955497686 NA Intergenic Intergenic -9107 NM_175403 109154 Mm.153963 NM_175403 ENSMUSG00000048578 Mlec 2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152 malectin protein-coding common_peak2_75_549_-0.0496989826424183_9.07843831709081_0.366177184218321 chr2 26351243 26352892 + 0.366177184218321 NA promoter-TSS (NM_001139504) promoter-TSS (NM_001139504) 43 NM_026828 52838 Mm.31239 NM_026828 ENSMUSG00000075467 Dnlz 1110034G11Rik|D2Bwg1335e|HEP1 DNL-type zinc finger protein-coding common_peak1_77_531_0.0442733252930285_9.0774190981477_0.366177184218321 chr19 34677388 34678918 + 0.366177184218321 NA intron (NM_172838, intron 3 of 6) intron (NM_172838, intron 3 of 6) 37264 NM_008331 15957 Mm.439751 NM_008331 ENSMUSG00000034459 Ifit1 ISG56|Ifi56|P56 interferon-induced protein with tetratricopeptide repeats 1 protein-coding common_peak1_51_320_0.0556040687049855_8.35423152147479_0.366112733269216 chr6 87547667 87548324 + 0.366112733269216 NA Intergenic Intergenic -14736 NM_001286610 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak1_19_111_-0.116220694426827_6.74924457484419_0.365986360980867-3 chr17 80727561 80728014 + 0.365986360980867 NA intron (NM_001290345, intron 1 of 33) CpG 238 NM_001290345 225028 Mm.311948 NM_001081357 ENSMUSG00000024242 Map4k3 4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding common_peak1_19_111_-0.116220694426827_6.74924457484419_0.365986360980867-4 chr7 16875296 16875785 + 0.365986360980867 NA exon (NM_001081655, exon 1 of 4) exon (NM_001081655, exon 1 of 4) 223 NM_001081655 629378 Mm.491123 NM_001081655 ENSMUSG00000078794 Dact3 EG666671|naa-3 dishevelled-binding antagonist of beta-catenin 3 protein-coding common_peak1_19_111_-0.116220694426827_6.74924457484419_0.365986360980867 chr12 98572885 98573419 + 0.365986360980867 NA intron (NM_029911, intron 1 of 6) intron (NM_029911, intron 1 of 6) 1560 NM_001316666 72258 Mm.196158 NM_029911 ENSMUSG00000033854 Kcnk10 1700024D23Rik|3010005K24Rik|Trek2 potassium channel, subfamily K, member 10 protein-coding common_peak1_19_111_-0.116220694426827_6.74924457484419_0.365986360980867-2 chr17 3397714 3398210 + 0.365986360980867 NA intron (NM_011878, intron 1 of 26) intron (NM_011878, intron 1 of 26) 755 NM_011878 24001 Mm.137134 NM_011878 ENSMUSG00000023800 Tiam2 3000002F19Rik|STEF|mKIAA2016 T cell lymphoma invasion and metastasis 2 protein-coding common_peak1_185_1624_-0.0287949707292334_10.6518265174386_0.365898422230796 chr5 113735023 113736596 + 0.365898422230796 NA promoter-TSS (NM_001010825) promoter-TSS (NM_001010825) 27 NM_001010825 231630 Mm.21926 NM_001010825 ENSMUSG00000053334 Ficd D5Ertd40e|Hype FIC domain containing protein-coding common_peak1_130_1061_-0.0354807889572797_10.0348276563255_0.365751140474241 chr7 114253896 114255237 + 0.365751140474241 NA intron (NM_033370, intron 1 of 21) CpG 114 NM_033370 70349 Mm.277024 NM_033370 ENSMUSG00000030754 Copb1 2610019B04Rik coatomer protein complex, subunit beta 1 protein-coding common_peak1_62_438_-0.0564679695835757_8.74984314474357_0.365672903841561 chr11 119391305 119392567 + 0.365672903841561 NA Intergenic Intergenic 1464 NR_035453 100316690 NR_035453 ENSMUSG00000088015 Mir1932 mir-1932|mmu-mir-1932 microRNA 1932 ncRNA common_peak2_62_438_-0.0564679695835757_8.74984314474357_0.365672903841561 chr15 67288747 67290878 + 0.365672903841561 NA intron (NR_045140, intron 5 of 8) intron (NR_045140, intron 5 of 8) 63043 NR_045140 69334 Mm.63770 NR_045140 ENSMUSG00000102069 1700012I11Rik - RIKEN cDNA 1700012I11 gene ncRNA common_peak1_28_173_-0.0942801813361598_7.39580340518065_0.365666694900776 chr19 24225164 24225784 + 0.365666694900776 NA promoter-TSS (NM_011597) promoter-TSS (NM_011597) -448 NM_011597 21873 Mm.104744 NM_011597 ENSMUSG00000024812 Tjp2 ZO-2 tight junction protein 2 protein-coding unique_peak2_28_173_-0.0942801813361598_7.39580340518065_0.365666694900776-2 chr7 80904549 80905731 + 0.365666694900776 NA promoter-TSS (NM_026523) promoter-TSS (NM_026523) -78 NM_001291280 68039 Mm.22246 NM_026523 ENSMUSG00000025723 Nmb 3110023K12Rik neuromedin B protein-coding unique_peak2_28_173_-0.0942801813361598_7.39580340518065_0.365666694900776 chr5 111814643 111816229 + 0.365666694900776 NA Intergenic ORR1D2|LTR|ERVL-MaLR -53708 NR_045833 269683 Mm.136946 NM_207252 ENSMUSG00000085271 E130006D01Rik Gm16018|Gm681|OTTMUSG00000029083 RIKEN cDNA E130006D01 gene ncRNA unique_peak2_33_209_-0.0840969455055953_7.67219704491333_0.365595145233332 chr4 9630227 9631446 + 0.365595145233332 NA exon (NM_001177856, exon 5 of 5) exon (NM_001177856, exon 5 of 5) 12881 NM_001177853 65973 Mm.222206 NM_023066 ENSMUSG00000028207 Asph 2310005F16Rik|3110001L23Rik|AI848629|AW261690|AW561901|BAH|C79816|cI-37 aspartate-beta-hydroxylase protein-coding common_peak1_139_1150_-0.0340017812359843_10.1516712275142_0.365583528347669 chr3 94837169 94838501 + 0.365583528347669 NA intron (NM_001165948, intron 1 of 18) CpG 268 NM_172683 229584 Mm.274787 NM_172683 ENSMUSG00000038902 Pogz 9530006B08Rik pogo transposable element with ZNF domain protein-coding unique_peak2_15_86_-0.14669023272356_6.36959837948695_0.365535503818061 chr13 83531767 83532458 + 0.365535503818061 NA intron (NM_001170537, intron 2 of 10) intron (NM_001170537, intron 2 of 10) 28078 NM_025282 17260 Mm.24001 NM_025282 ENSMUSG00000005583 Mef2c 5430401D19Rik|9930028G15Rik|AV011172|Mef2 myocyte enhancer factor 2C protein-coding common_peak1_15_86_-0.14669023272356_6.36959837948695_0.365535503818061-2 chr12 69458053 69458423 + 0.365535503818061 NA Intergenic Intergenic 17312 NR_038060 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak1_15_86_-0.14669023272356_6.36959837948695_0.365535503818061 chr10 61203339 61203783 + 0.365535503818061 NA intron (NM_001081127, intron 18 of 21) intron (NM_001081127, intron 18 of 21) 28299 NM_023064 65971 Mm.30227 NM_023064 ENSMUSG00000020096 Tbata 1700021K02Rik|AI428928|Spatial|Titest thymus, brain and testes associated protein-coding unique_peak2_15_86_-0.14669023272356_6.36959837948695_0.365535503818061-2 chr8 36183790 36184346 + 0.365535503818061 NA Intergenic B1_Mus2|SINE|Alu 65448 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding common_peak1_15_86_-0.14669023272356_6.36959837948695_0.365535503818061-3 chr15 11398552 11398988 + 0.365535503818061 NA intron (NM_033074, intron 1 of 18) intron (NM_033074, intron 1 of 18) 888 NM_033074 110960 Mm.286061 NM_033074 ENSMUSG00000022241 Tars D15Wsu59e|ThrRS threonyl-tRNA synthetase protein-coding common_peak1_15_86_-0.14669023272356_6.36959837948695_0.365535503818061-4 chr18 62719705 62720145 + 0.365535503818061 NA intron (NM_001168423, intron 1 of 4) intron (NM_001168423, intron 1 of 4) 21462 NM_001168423 100038417 Mm.387557 NM_001168423 ENSMUSG00000073551 Spink13 ENSMUSG00000073551|Gm10534|Spink5l3 serine peptidase inhibitor, Kazal type 13 protein-coding common_peak1_15_86_-0.14669023272356_6.36959837948695_0.365535503818061-5 chr6 72550560 72551008 + 0.365535503818061 NA intron (NM_001271395, intron 1 of 9) L3|LINE|CR1 1137 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_64_423_0.0489940657696977_8.75241748744805_0.365522903047704 chr9 121926498 121928303 + 0.365522903047704 NA Intergenic Intergenic -9875 NR_033553 69430 Mm.482910 NR_033553 ENSMUSG00000043773 1700048O20Rik 1700022O21Rik RIKEN cDNA 1700048O20 gene ncRNA common_peak1_616_6870_0.0131245492690208_12.7528666423358_0.365463368987687 chr9 61665525 61671105 + 0.365463368987687 NA Intergenic Intergenic 246195 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_189_1604_0.0267245194519017_10.6617198417356_0.365457808118754 chr13 55361706 55363152 + 0.365457808118754 NA exon (NM_025828, exon 1 of 8) exon (NM_025828, exon 1 of 8) 354 NM_025828 66890 Mm.38868 NM_025828 ENSMUSG00000021484 Lman2 1110003H06Rik|1300009F09Rik|AA408240|AL023023|AU040819|GP36B|VIP36 lectin, mannose-binding 2 protein-coding common_peak2_40_237_0.0666255017574819_7.92813051418668_0.36537645811733 chr14 54258668 54259953 + 0.36537645811733 NA promoter-TSS (NM_134076) promoter-TSS (NM_134076) 78 NM_134076 105501 Mm.28771 NM_134076 ENSMUSG00000040997 Abhd4 1110035H23Rik|AI429574|Abh4 abhydrolase domain containing 4 protein-coding common_peak2_151_1217_0.029902719049625_10.2652497774311_0.365354869484516 chr4 155562436 155564974 + 0.365354869484516 NA promoter-TSS (NM_001159637) promoter-TSS (NM_001159637) -110 NM_001159637 192185 Mm.28347 NM_138671 ENSMUSG00000029063 Nadk 4432404C02Rik|BC004012 NAD kinase protein-coding common_peak2_44_292_-0.0685782168576168_8.16046774599344_0.365305047689712 chr8 83331651 83332584 + 0.365305047689712 NA intron (NM_001170691, intron 1 of 8) CpG 369 NM_001170691 244548 Mm.38762 NM_178736 ENSMUSG00000035151 Elmod2 9830169G11Rik ELMO/CED-12 domain containing 2 protein-coding common_peak1_69_497_-0.0519439063581917_8.93402997888899_0.365266146880546 chr9 98296562 98297677 + 0.365266146880546 NA intron (NM_144533, intron 1 of 4) intron (NM_144533, intron 1 of 4) 536 NM_144533 74080 Mm.294082 NM_144533 ENSMUSG00000032456 Nmnat3 4933408N02Rik|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding common_peak2_56_388_-0.0591276254360196_8.57406253226818_0.365236688740776 chr10 41972508 41973971 + 0.365236688740776 NA intron (NM_001034858, intron 7 of 17) intron (NM_001034858, intron 7 of 17) 45143 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak2_83_620_-0.0477501920492713_9.25457436219585_0.365234187247555 chr17 5974826 5976835 + 0.365234187247555 NA exon (NM_001113353, exon 2 of 27) exon (NM_001113353, exon 2 of 27) 244 NM_011523 20975 Mm.236068 NM_011523 ENSMUSG00000023805 Synj2 AI481647|SJ2|mKIAA0348 synaptojanin 2 protein-coding common_peak2_131_1071_-0.0355446204241812_10.0483168802457_0.36513966982739-2 chr3 41741712 41743512 + 0.36513966982739 NA promoter-TSS (NM_027271) promoter-TSS (NM_027271) -3 NM_001291048 73852 Mm.29006 NM_027271 ENSMUSG00000025766 D3Ertd751e 2810009O15Rik|4930415G15Rik DNA segment, Chr 3, ERATO Doi 751, expressed protein-coding common_peak2_131_1071_-0.0355446204241812_10.0483168802457_0.36513966982739 chr2 34825417 34826943 + 0.36513966982739 NA promoter-TSS (NM_013890) promoter-TSS (NM_013890) 55 NM_001164770 30050 Mm.4465 NM_013890 ENSMUSG00000035949 Fbxw2 2700071L08Rik|FBW2|Fwd2|MD6 F-box and WD-40 domain protein 2 protein-coding common_peak2_180_1511_0.0269648912552896_10.5757248698487_0.365065272250378 chr12 112999690 113001779 + 0.365065272250378 NA promoter-TSS (NM_028193) promoter-TSS (NM_028193) -113 NM_028193 72308 Mm.196721 NM_028193 ENSMUSG00000011158 Brf1 2510002F24Rik|GTF3B|TAF3C|TAFIII90|TFIIIB90|mTFIIIB90 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit protein-coding common_peak2_187_1645_-0.0283929106228946_10.6705521651102_0.365062412220193 chr3 121290835 121292832 + 0.365062412220193 NA promoter-TSS (NM_024178) promoter-TSS (NM_024178) 16 NM_024178 66789 Mm.269881 NM_024178 ENSMUSG00000039887 Alg14 5430428G01Rik|AI854024 asparagine-linked glycosylation 14 protein-coding common_peak1_50_340_-0.0659571518967166_8.38064935307581_0.364939896970008 chr11 118476887 118477638 + 0.364939896970008 NA intron (NM_172573, intron 1 of 13) intron (NM_172573, intron 1 of 13) 302 NM_172573 217364 Mm.473963 NM_172573 ENSMUSG00000033857 Engase C130099A03|D230014K01Rik endo-beta-N-acetylglucosaminidase protein-coding common_peak2_58_375_0.0509375533641876_8.58005762835973_0.364900924321364 chr5 106824872 106826169 + 0.364900924321364 NA Intergenic Intergenic 100370 NM_177873 330149 Mm.121664 NM_177873 ENSMUSG00000043410 Hfm1 A330009G12Rik|Gm1046|Mer3|Sec63d1 HFM1, ATP-dependent DNA helicase homolog protein-coding common_peak1_168_1445_-0.0300379884217072_10.4828328427403_0.364862207127233 chr18 32162820 32163916 + 0.364862207127233 NA 5' UTR (NM_011946, exon 1 of 17) 5' UTR (NM_011946, exon 1 of 17) 279 NM_011946 26405 Mm.211762 NM_011946 ENSMUSG00000024383 Map3k2 9630061B06Rik|AI585793|Mekk2|Mekk2b mitogen-activated protein kinase kinase kinase 2 protein-coding common_peak2_117_889_0.034477190374421_9.81490012104097_0.36481345654989 chr11 100859102 100861736 + 0.36481345654989 NA promoter-TSS (NM_001164062) promoter-TSS (NM_001164062) -65 NM_001164062 20850 Mm.277403 NM_011488 ENSMUSG00000004043 Stat5a AA959963|STAT5 signal transducer and activator of transcription 5A protein-coding common_peak2_208_1871_-0.0266191030586622_10.8570551680541_0.364787468142872 chr12 76360722 76364832 + 0.364787468142872 NA intron (NM_028356, intron 1 of 2) intron (NM_028356, intron 1 of 2) 6687 NM_001172104 109929 Mm.41880 NM_028356 ENSMUSG00000056459 Zbtb25 2810462M08Rik|2900064P18Rik|AI842128|Kup|Zfp-50|Zfp50 zinc finger and BTB domain containing 25 protein-coding common_peak1_171_1418_0.0282929185661107_10.4848053333436_0.364773084065277 chr19 7340389 7342643 + 0.364773084065277 NA 5' UTR (NM_007928, exon 1 of 18) 5' UTR (NM_007928, exon 1 of 18) 344 NM_001080389 13728 Mm.258986 NM_007928 ENSMUSG00000024969 Mark2 EMK-1|Emk|Par-1|Par-1b MAP/microtubule affinity regulating kinase 2 protein-coding common_peak1_101_741_0.0390077116930101_9.55477923246731_0.364745929962678 chr1 74303465 74304844 + 0.364745929962678 NA 5' UTR (NM_027154, exon 1 of 12) 5' UTR (NM_027154, exon 1 of 12) 182 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding unique_peak2_35_201_0.0730861903072286_7.69475457790541_0.364656929208032 chr2 118548935 118550355 + 0.364656929208032 NA promoter-TSS (NM_138313) promoter-TSS (NM_138313) 33 NM_138313 171543 Mm.210125 NM_138313 ENSMUSG00000040093 Bmf AW260063|AW411872 BCL2 modifying factor protein-coding common_peak2_35_201_0.0730861903072286_7.69475457790541_0.364656929208032 chr17 51407902 51409453 + 0.364656929208032 NA intron (NR_037250, intron 3 of 4) intron (NR_037250, intron 3 of 4) 39592 NR_046166 328837 Mm.236143 NR_046166 C330011F03Rik C330011F03 RIKEN cDNA C330011F03 gene ncRNA common_peak1_46_282_0.0584728445941352_8.17389466512895_0.364636562541902 chr11 4218257 4218909 + 0.364636562541902 NA intron (NM_028022, intron 1 of 8) CpG 332 NM_028022 71962 Mm.7852 NM_028022 ENSMUSG00000020424 Gatsl3 2410008K03Rik GATS protein-like 3 protein-coding common_peak2_46_282_0.0584728445941352_8.17389466512895_0.364636562541902 chr4 32263377 32265030 + 0.364636562541902 NA Intergenic L1MB5|LINE|L1 -153232 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak2_25_134_0.0786056475901011_7.11611842084588_0.364539102122531 chr10 89764451 89765568 + 0.364539102122531 NA intron (NM_029166, intron 1 of 20) intron (NM_029166, intron 1 of 20) 20018 NM_029166 75089 Mm.268922 NM_029166 ENSMUSG00000019951 Uhrf1bp1l 2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701 UHRF1 (ICBP90) binding protein 1-like protein-coding unique_peak2_25_134_0.0786056475901011_7.11611842084588_0.364539102122531-2 chr8 71213921 71214797 + 0.364539102122531 NA Intergenic Intergenic -7411 NR_131056 330796 Mm.258257 NR_131056 Gm38415 E230016D10 predicted gene, 38415 ncRNA common_peak1_25_134_0.0786056475901011_7.11611842084588_0.364539102122531 chr15 57912251 57912645 + 0.364539102122531 NA intron (NM_001167679, intron 1 of 17) CpG 249 NM_001167679 210544 Mm.390835 NM_199300 ENSMUSG00000022364 Tbc1d31 4B3|D330013L20Rik|Gm85|Wdr67 TBC1 domain family, member 31 protein-coding common_peak2_25_134_0.0786056475901011_7.11611842084588_0.364539102122531 chr3 60573271 60574362 + 0.364539102122531 NA intron (NM_001310514, intron 2 of 8) intron (NM_001310514, intron 2 of 8) 72637 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_63_446_-0.0546531356854381_8.7768044533406_0.364492078909893 chr3 34020111 34021069 + 0.364492078909893 NA intron (NM_008053, intron 1 of 15) CpG 511 NM_001113188 14359 Mm.259021 NM_008053 ENSMUSG00000027680 Fxr1 1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p fragile X mental retardation gene 1, autosomal homolog protein-coding common_peak2_65_431_0.0490447566837684_8.77940988050535_0.364347502332368 chr17 56934475 56936071 + 0.364347502332368 NA exon (NM_022328, exon 1 of 12) exon (NM_022328, exon 1 of 12) 115 NM_022328 64144 Mm.148748 NM_022328 ENSMUSG00000024212 Mllt1 AA407901|BAM11|ENL|LTG19 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1 protein-coding common_peak1_153_1237_0.0295382527451586_10.2885647255868_0.364326042723174 chr4 40238900 40240651 + 0.364326042723174 NA promoter-TSS (NM_172689) promoter-TSS (NM_172689) 50 NM_172689 230073 Mm.86382 NM_172689 ENSMUSG00000040296 Ddx58 6430573D20Rik|C330021E21|RIG-I|RLR-1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 protein-coding common_peak2_124_1002_-0.0359851115974781_9.95211333481344_0.36420164907884 chr19 41980234 41982305 + 0.36420164907884 NA promoter-TSS (NM_145500) promoter-TSS (NM_145500) -133 NM_028152 72199 Mm.218940 NM_028152 ENSMUSG00000025159 Mms19 2410001K24Rik|2610042O15Rik|AI316855|C79368|C86341|Mms19l MMS19 (MET18 S. cerevisiae) protein-coding unique_peak2_30_167_0.0743647819555457_7.42949981375653_0.364163087153355 chr11 75594030 75595209 + 0.364163087153355 NA intron (NM_008850, intron 2 of 11) intron (NM_008850, intron 2 of 11) 5612 NR_110477 654359 Mm.439961 NR_110477 Gm12338 OTTMUSG00000006216 cytochrome c oxidase, subunit VIIc pseudogene pseudo common_peak1_30_167_0.0743647819555457_7.42949981375653_0.364163087153355 chr7 28782707 28783320 + 0.364163087153355 NA intron (NM_022432, intron 9 of 15) intron (NM_022432, intron 9 of 15) -1499 NR_040339 100503790 Mm.446894 NR_040339 Gm19897 - predicted gene, 19897 ncRNA common_peak2_72_489_0.0456810873830573_8.9594784826941_0.364103971717056 chr7 55967968 55969538 + 0.364103971717056 NA intron (NR_015495, intron 1 of 5) ORR1E-int|LTR|ERVL-MaLR 6222 NR_015495 320845 Mm.274484 NM_001033396 A230056P14Rik OTTMUSG00000027345 RIKEN cDNA A230056P14 gene ncRNA common_peak1_39_254_-0.0766068980417254_7.95604998783799_0.364078894589212 chr9 69121194 69121881 + 0.364078894589212 NA intron (NM_013646, intron 1 of 10) intron (NM_013646, intron 1 of 10) -168304 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding common_peak2_39_254_-0.0766068980417254_7.95604998783799_0.364078894589212-2 chr4 41123734 41124562 + 0.364078894589212 NA intron (NM_139236, intron 1 of 25) intron (NM_139236, intron 1 of 25) 191 NM_139236 230082 Mm.285797 NM_139236 ENSMUSG00000028430 Nol6 AA410091|Nrap nucleolar protein family 6 (RNA-associated) protein-coding common_peak2_39_254_-0.0766068980417254_7.95604998783799_0.364078894589212 chr2 26236756 26237941 + 0.364078894589212 NA promoter-TSS (NM_153559) promoter-TSS (NM_153559) 51 NM_153559 227638 Mm.116769 NM_153559 ENSMUSG00000036327 Qsox2 BC030934|Qscn6l1|Soxn quiescin Q6 sulfhydryl oxidase 2 protein-coding unique_peak2_39_254_-0.0766068980417254_7.95604998783799_0.364078894589212-2 chr4 103122524 103123716 + 0.364078894589212 NA intron (NM_001039081, intron 1 of 12) intron (NM_001039081, intron 1 of 12) 3730 NM_001039081 71148 Mm.288721 NM_027696 ENSMUSG00000028522 Mier1 4933425I22Rik|5830411K19Rik|er1 MEIR1 treanscription regulator protein-coding unique_peak2_39_254_-0.0766068980417254_7.95604998783799_0.364078894589212 chr14 54168144 54169731 + 0.364078894589212 NA Intergenic Intergenic 84992 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_77_567_-0.0501913587104639_9.12465144014945_0.36407547670458 chr9 120339090 120341230 + 0.36407547670458 NA intron (NM_144557, intron 2 of 16) intron (NM_144557, intron 2 of 16) 36087 NM_144557 245049 Mm.100936 NM_144557 ENSMUSG00000041794 Myrip A230081N12Rik|Slac2-c|Slac2c myosin VIIA and Rab interacting protein protein-coding common_peak1_94_679_0.0390788541375091_9.42893036320646_0.364064789647592 chr7 25282154 25283122 + 0.364064789647592 NA 5' UTR (NM_027882, exon 1 of 20) 5' UTR (NM_027882, exon 1 of 20) 459 NM_027882 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak1_142_1180_-0.0336029028147298_10.1889917979898_0.363923984947074 chr14 54894112 54895316 + 0.363923984947074 NA intron (NM_019402, intron 1 of 6) AT_rich|Low_complexity|Low_complexity 571 NM_019402 54196 Mm.7723 NM_019402 ENSMUSG00000022194 Pabpn1 PAB2|Pabp3|mPABII poly(A) binding protein, nuclear 1 protein-coding common_peak1_116_925_-0.0377904174990906_9.83597317451069_0.363905707108095 chr2 180171534 180172147 + 0.363905707108095 NA intron (NM_019822, intron 1 of 9) CpG 252 NM_019822 56436 Mm.316654 NM_019822 ENSMUSG00000039041 Adrm1 1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110|Rpn13 adhesion regulating molecule 1 protein-coding common_peak1_183_1542_0.0267753910818449_10.6049100421117_0.363790284699708 chr4 43492026 43493936 + 0.363790284699708 NA promoter-TSS (NR_001460) promoter-TSS (NR_001460) 78 NR_001460 19782 NR_001460 ENSMUSG00000088088 Rmrp 1110032O22Rik|Rmrpr RNA component of mitochondrial RNAase P ncRNA common_peak1_404_4186_-0.0172535328691019_12.0230744363058_0.363672496848986 chr4 145228362 145232067 + 0.363672496848986 NA intron (NM_011610, intron 1 of 9) MIRb|SINE|MIR 16656 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak2_24_145_-0.103809366743634_7.1379198755082_0.363634746336169 chr7 125581295 125582372 + 0.363634746336169 NA Intergenic Intergenic -21596 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding common_peak2_59_383_0.050306243062904_8.61011562225261_0.363592266371972 chr13 20096980 20098831 + 0.363592266371972 NA intron (NM_080288, intron 1 of 21) intron (NM_080288, intron 1 of 21) 7398 NM_080288 140580 Mm.342392 NM_080288 ENSMUSG00000041112 Elmo1 6330578D22Rik|C230095H21Rik|CED-12 engulfment and cell motility 1 protein-coding common_peak1_191_1687_-0.0274867870560218_10.7073557951792_0.36345341456471 chr5 135543813 135545446 + 0.36345341456471 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 493 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak1_34_216_-0.0801055179209458_7.72149847348401_0.363447588414567-3 chr8 105325852 105326283 + 0.363447588414567 NA promoter-TSS (NM_025486) promoter-TSS (NM_025486) 209 NM_177449 234684 Mm.381717 NM_177449 ENSMUSG00000041679 Lrrc29 A630024J02Rik|FBL9|FBXL9 leucine rich repeat containing 29 protein-coding common_peak1_34_216_-0.0801055179209458_7.72149847348401_0.363447588414567 chr17 87459616 87460401 + 0.363447588414567 NA Intergenic Intergenic -13073 NM_007589 12314 Mm.329243 NM_007589 ENSMUSG00000036438 Calm2 1500001E21Rik|AL024017 calmodulin 2 protein-coding common_peak1_34_216_-0.0801055179209458_7.72149847348401_0.363447588414567-2 chr19 17355815 17356685 + 0.363447588414567 NA intron (NM_010265, intron 1 of 2) intron (NM_010265, intron 1 of 2) 417 NM_173442 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding unique_peak2_34_216_-0.0801055179209458_7.72149847348401_0.363447588414567 chr4 62806392 62807589 + 0.363447588414567 NA Intergenic Intergenic 133016 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_143_1190_-0.033435402432378_10.2012399966479_0.363389604674608 chr4 135271403 135272782 + 0.363389604674608 NA intron (NM_013885, intron 1 of 5) ID_B1|SINE|B4 668 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak1_279_2670_-0.021881612552507_11.3722234543589_0.363335963044549 chr5 93092305 93095291 + 0.363335963044549 NA intron (NM_001310669, intron 1 of 10) CpG 382 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_41_245_0.0615724496456149_7.97330073016205_0.363325177636207 chr11 60046278 60046768 + 0.363325177636207 NA promoter-TSS (NM_001290011) promoter-TSS (NM_001290011) -34 NM_001290011 18618 Mm.2731 NM_008819 ENSMUSG00000000301 Pemt PEAMT|PEMT2|PLMT|Pempt|Pempt2 phosphatidylethanolamine N-methyltransferase protein-coding common_peak1_53_335_0.0565024552471911_8.42056865040236_0.363257819364569 chr1 40503997 40504816 + 0.363257819364569 NA Intergenic Intergenic -10956 NM_010553 16174 Mm.20466 NM_010553 ENSMUSG00000026068 Il18rap AcPL|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1RAcPL interleukin 18 receptor accessory protein protein-coding common_peak2_53_335_0.0565024552471911_8.42056865040236_0.363257819364569 chr17 45752912 45753614 + 0.363257819364569 NA Intergenic Intergenic -19419 NM_028164 72240 Mm.482897 NM_028164 ENSMUSG00000094690 1600014C23Rik - RIKEN cDNA 1600014C23 gene protein-coding common_peak1_357_3511_0.0180797670737665_11.7871170130722_0.363252457039336 chr11 6559083 6562889 + 0.363252457039336 NA intron (NM_001190344, intron 1 of 9) intron (NM_001190344, intron 1 of 9) 803 NM_001190344 216527 Mm.221271 NM_146014 ENSMUSG00000000378 Ccm2 BC029157 cerebral cavernous malformation 2 protein-coding common_peak1_66_439_0.0491839866250636_8.80595170683719_0.363214180990366 chr4 94556130 94557124 + 0.363214180990366 NA exon (NM_026368, exon 1 of 6) exon (NM_026368, exon 1 of 6) 169 NM_026368 67770 Mm.35170 NM_026368 ENSMUSG00000028578 Caap1 5830433M19Rik|AI536248|CAAP caspase activity and apoptosis inhibitor 1 protein-coding common_peak2_64_455_-0.0559754938318449_8.80490226724882_0.363214180990366 chr4 133545003 133546044 + 0.363214180990366 NA intron (NM_010948, intron 1 of 7) intron (NM_010948, intron 1 of 7) 504 NM_010948 18221 Mm.69 NM_010948 ENSMUSG00000028851 Nudc SIG-92|Silg92 nudC nuclear distribution protein protein-coding common_peak2_78_575_-0.0478259103289957_9.14601204627781_0.363184298845221 chr9 22130428 22132296 + 0.363184298845221 NA promoter-TSS (NM_007388) promoter-TSS (NM_007388) 503 NM_001102404 11433 Mm.46354 NM_007388 ENSMUSG00000001348 Acp5 TRACP|TRAP acid phosphatase 5, tartrate resistant protein-coding common_peak2_47_289_0.0604786892635172_8.21014843464669_0.363129561956799 chr18 79068362 79070096 + 0.363129561956799 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 40162 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_21_108_0.0916134179170252_6.81399103373544_0.363085260456411 chr14 56265580 56266083 + 0.363085260456411 NA Intergenic L1M2|LINE|L1 -3571 NM_013542 14939 Mm.14874 NM_013542 ENSMUSG00000015437 Gzmb AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB granzyme B protein-coding unique_peak2_21_108_0.0916134179170252_6.81399103373544_0.363085260456411 chr11 72489049 72489873 + 0.363085260456411 NA exon (NM_153060, exon 1 of 13) exon (NM_153060, exon 1 of 13) 459 NM_153060 216892 Mm.212812 NM_153060 ENSMUSG00000040447 Spns2 - spinster homolog 2 protein-coding common_peak1_29_180_-0.0911894544855025_7.45425115984045_0.363080508362611 chr19 6057390 6057793 + 0.363080508362611 NA promoter-TSS (NM_001160239) promoter-TSS (NM_001160239) 160 NM_026246 18120 Mm.181290 NM_026246 ENSMUSG00000007338 Mrpl49 4833419D18Rik|Nof1 mitochondrial ribosomal protein L49 protein-coding common_peak2_29_180_-0.0911894544855025_7.45425115984045_0.363080508362611 chr15 41611624 41612470 + 0.363080508362611 NA intron (NM_001130166, intron 2 of 16) intron (NM_001130166, intron 2 of 16) 164565 NM_001130166 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak1_101_783_-0.0404267558013949_9.59449646621451_0.363013738142009 chr1 160053613 160055153 + 0.363013738142009 NA intron (NM_001162896, intron 1 of 2) intron (NM_001162896, intron 1 of 2) 10003 NM_001162896 67647 Mm.171518 NM_001024470 ENSMUSG00000090394 4930523C07Rik - RIKEN cDNA 4930523C07 gene protein-coding common_peak1_195_1668_0.0253326199207979_10.717434549323_0.363008447373935 chr1 180402332 180403826 + 0.363008447373935 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -72530 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_126_1022_-0.036379735571284_9.98040056195969_0.362950665788019 chr6 120821710 120823516 + 0.362950665788019 NA promoter-TSS (NM_007510) promoter-TSS (NM_007510) 72 NM_007510 11973 Mm.29045 NM_007510 ENSMUSG00000019210 Atp6v1e1 2410029D23Rik|Atp6e|Atp6e2|Atp6v1e|D6Ertd385e|E2|P31|Vma4 ATPase, H+ transporting, lysosomal V1 subunit E1 protein-coding common_peak2_135_1110_-0.034269906855851_10.1005081479612_0.362861412509701 chr4 139379466 139381838 + 0.362861412509701 NA promoter-TSS (NM_001160319) promoter-TSS (NM_001160319) -7 NM_001160319 69116 Mm.271956 NM_001160319 ENSMUSG00000066036 Ubr4 1810009A16Rik|A930005E13Rik|D930005K06Rik|Gm1032|Gm1666|N28143|RBAF600|Zubr1|mKIAA0462|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding common_peak1_88_626_0.0406967359621486_9.31267000078311_0.362708259916519 chr2 167688549 167689705 + 0.362708259916519 NA exon (NM_009883, exon 1 of 1) exon (NM_009883, exon 1 of 1) 212 NM_001287738 12608 Mm.439656 NM_009883 ENSMUSG00000056501 Cebpb C/EBPbeta|CRP2|IL-6DBP|LAP|LIP|NF-IL6|NF-M|Nfil6 CCAAT/enhancer binding protein (C/EBP), beta protein-coding common_peak1_214_1936_-0.0257754814709816_10.9067204978678_0.362628395687436 chr17 70989510 70991339 + 0.362628395687436 NA promoter-TSS (NM_023402) promoter-TSS (NM_023402) 92 NM_023402 67938 Mm.261329 NM_023402 ENSMUSG00000034868 Myl12b 1500001M02Rik|C77744|Mylc2b|RLC-B myosin, light chain 12B, regulatory protein-coding common_peak1_322_3093_0.0188389645422831_11.6046769637202_0.362534593682889 chr11 116851909 116854598 + 0.362534593682889 NA promoter-TSS (NM_178620) promoter-TSS (NM_178620) -159 NM_011358 20382 Mm.21841 NM_011358 ENSMUSG00000034120 Srsf2 D11Wsu175e|MRF-1|Pr264|SC35|Sfrs10|Sfrs2 serine/arginine-rich splicing factor 2 protein-coding common_peak2_294_2845_-0.0210879546063367_11.4641759692233_0.362523533345792 chr9 59655571 59660670 + 0.362523533345792 NA intron (NM_001253883, intron 1 of 10) intron (NM_001253883, intron 1 of 10) 1752 NM_001253883 18746 Mm.326167 NM_011099 ENSMUSG00000032294 Pkm AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2 pyruvate kinase, muscle protein-coding common_peak1_58_405_-0.0598095121433513_8.6354311611135_0.362490408910536-2 chr4 109760597 109761402 + 0.362490408910536 NA intron (NM_007983, intron 7 of 18) intron (NM_007983, intron 7 of 18) 84372 NM_007983 14084 Mm.318259 NM_007983 ENSMUSG00000010517 Faf1 AA408698|Dffrx|Fam Fas-associated factor 1 protein-coding common_peak1_58_405_-0.0598095121433513_8.6354311611135_0.362490408910536 chr10 122096547 122097337 + 0.362490408910536 NA exon (NM_153059, exon 1 of 6) exon (NM_153059, exon 1 of 6) 160 NM_153059 216395 Mm.236764 NM_153059 ENSMUSG00000034620 Tmem5 6330415D21Rik transmembrane protein 5 protein-coding common_peak2_40_261_-0.0719797364720245_7.99743313330144_0.362347816476574 chr16 58711869 58713094 + 0.362347816476574 NA Intergenic Intergenic 6243 NM_001162955 71223 Mm.359970 NM_001162955 ENSMUSG00000047293 Gpr15 4933439K08Rik G protein-coupled receptor 15 protein-coding common_peak1_36_209_0.0655381335452878_7.74701458443877_0.362283366360969 chr13 43222729 43223658 + 0.362283366360969 NA intron (NM_001033399, intron 1 of 1) B4A|SINE|B4 -51692 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak2_52_355_-0.0599916655232864_8.44573759820475_0.362184779843814 chr2 30092939 30094440 + 0.362184779843814 NA promoter-TSS (NM_025428) promoter-TSS (NM_025428) -54 NM_001037762 66220 Mm.22538 NM_025428 ENSMUSG00000015335 Zdhhc12 1190004A01Rik zinc finger, DHHC domain containing 12 protein-coding common_peak2_52_355_-0.0599916655232864_8.44573759820475_0.362184779843814-2 chr2 72838332 72839535 + 0.362184779843814 NA Intergenic ORR1D1|LTR|ERVL-MaLR -25216 NR_102349 76218 Mm.75260 NR_102348 ENSMUSG00000085427 6430710C18Rik 5033406J01Rik RIKEN cDNA 6430710C18 gene ncRNA unique_peak2_13_61_0.105756128444695_6.00707437460922_0.362125042338591 chr9 79946940 79947540 + 0.362125042338591 NA intron (NM_001081243, intron 1 of 5) B1F2|SINE|Alu 30642 NM_001081243 70598 Mm.23049 NM_001081243 ENSMUSG00000034898 Filip1 5730485H21Rik|AI843021 filamin A interacting protein 1 protein-coding common_peak1_12_67_-0.158653907795762_6.00813588735246_0.362125042338579-2 chr15 41830830 41831224 + 0.362125042338579 NA promoter-TSS (NM_001130164) promoter-TSS (NM_001130164) 69 NM_001130164 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding unique_peak2_12_67_-0.158653907795762_6.00813588735246_0.362125042338579 chr6 99049897 99050502 + 0.362125042338579 NA intron (NM_001197321, intron 4 of 17) intron (NM_001197321, intron 4 of 17) -21901 NM_001197322 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding unique_peak2_12_67_-0.158653907795762_6.00813588735246_0.362125042338579-2 chr7 128207789 128208416 + 0.362125042338579 NA Intergenic Intergenic -1736 NM_009943 12862 Mm.43824 NM_009943 ENSMUSG00000030785 Cox6a2 CoxVIaH|VIaH cytochrome c oxidase subunit VIa polypeptide 2 protein-coding common_peak1_12_67_-0.158653907795762_6.00813588735246_0.362125042338579 chr14 25488862 25489267 + 0.362125042338579 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 29879 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_72_523_-0.0511039751518219_9.00787101396154_0.362019701879865 chr17 37045977 37046909 + 0.362019701879865 NA intron (NM_019439, intron 1 of 22) CpG 477 NM_019439 54393 Mm.32191 NM_019439 ENSMUSG00000024462 Gabbr1 GABAB1|GABAbR1|bM573K1.1 gamma-aminobutyric acid (GABA) B receptor, 1 protein-coding common_peak2_284_2728_-0.0215523728456457_11.4033804928513_0.362001715587254 chr12 3425804 3428481 + 0.362001715587254 NA promoter-TSS (NR_030694) promoter-TSS (NR_030694) 285 NM_172421 75302 Mm.120475 NM_172421 ENSMUSG00000037486 Asxl2 4930556B16Rik|mKIAA1685 additional sex combs like 2 (Drosophila) protein-coding common_peak1_20_118_-0.117343119509446_6.83614620355322_0.361996120475765-4 chr9 110649575 110649983 + 0.361996120475765 NA intron (NM_183276, intron 1 of 53) intron (NM_183276, intron 1 of 53) 4382 NM_183276 235627 Mm.335481 NM_183276 ENSMUSG00000056724 Nbeal2 1110014F23Rik|BC042396|mKIAA0540 neurobeachin-like 2 protein-coding common_peak1_20_118_-0.117343119509446_6.83614620355322_0.361996120475765-3 chr11 95333478 95333868 + 0.361996120475765 NA Intergenic Intergenic -3345 NM_172543 215512 Mm.262113 NM_172543 ENSMUSG00000038893 Fam117a 5730593F17Rik|AW548096 family with sequence similarity 117, member A protein-coding common_peak1_20_118_-0.117343119509446_6.83614620355322_0.361996120475765-2 chr10 77529157 77529600 + 0.361996120475765 NA promoter-TSS (NM_008404) promoter-TSS (NM_008404) -970 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding common_peak1_20_118_-0.117343119509446_6.83614620355322_0.361996120475765 chr1 182367906 182368425 + 0.361996120475765 NA Intergenic Intergenic -26559 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak2_20_118_-0.117343119509446_6.83614620355322_0.361996120475765 chr4 129579913 129580874 + 0.361996120475765 NA Intergenic B1F|SINE|Alu -1813 NM_182783 230766 Mm.20377 NM_182783 ENSMUSG00000050493 Fam167b SEC family with sequence similarity 167, member B protein-coding common_peak2_119_954_-0.0374758679526952_9.88061898894676_0.361970972290732 chr19 23133921 23136607 + 0.361970972290732 NA Intergenic CpG -5962 NM_010638 16601 Mm.291595 NM_010638 ENSMUSG00000033863 Klf9 2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971 Kruppel-like factor 9 protein-coding common_peak1_113_852_0.0347090994182402_9.75375648102741_0.361923454908659 chr3 20057184 20058440 + 0.361923454908659 NA promoter-TSS (NR_105047) promoter-TSS (NR_105047) 1 NM_009210 20585 Mm.209650 NM_009210 ENSMUSG00000002428 Hltf AF010600|BC057116|P113|Smarca3|Snf2l3 helicase-like transcription factor protein-coding common_peak1_26_140_0.0826562144408012_7.18087945961919_0.361901174294291 chr18 46599022 46599595 + 0.361901174294291 NA intron (NM_010120, intron 2 of 2) Charlie1b|DNA|hAT-Charlie 1604 NM_010120 13664 Mm.262037 NM_010120 ENSMUSG00000057561 Eif1a C76390|Ef1a|Eftu|Eif4c|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A protein-coding common_peak1_26_140_0.0826562144408012_7.18087945961919_0.361901174294291-2 chr7 27838018 27838514 + 0.361901174294291 NA promoter-TSS (NM_011762) promoter-TSS (NM_011762) -318 NM_011762 22717 Mm.379046 NM_011762 ENSMUSG00000078779 Zfp59 Mfg-2|Mfg2 zinc finger protein 59 protein-coding common_peak1_17_84_0.0952944257349655_6.45703814900518_0.361847447176661-3 chr7 44572605 44572885 + 0.361847447176661 NA intron (NM_008437, intron 1 of 8) intron (NM_008437, intron 1 of 8) 300 NM_008437 16541 Mm.383181 NM_008437 ENSMUSG00000002204 Napsa KAP|Kdap|NAP1|SNAPA|pronapsin napsin A aspartic peptidase protein-coding unique_peak2_17_84_0.0952944257349655_6.45703814900518_0.361847447176661-3 chr19 46006219 46007089 + 0.361847447176661 NA TTS (NM_176785) TTS (NM_176785) 3176 NM_176785 20170 Mm.101110 NM_176785 ENSMUSG00000074811 Hps6 5330434M19Rik|BLOC2|ru Hermansky-Pudlak syndrome 6 protein-coding unique_peak2_17_84_0.0952944257349655_6.45703814900518_0.361847447176661 chr11 4591066 4591859 + 0.361847447176661 NA intron (NM_028860, intron 1 of 17) intron (NM_028860, intron 1 of 17) 3353 NM_028860 74302 Mm.425669 NM_028860 ENSMUSG00000034354 Mtmr3 1700092A20Rik|AI255150|AW557713|FYVE-DSP1|ZFYVE10|mKIAA0371 myotubularin related protein 3 protein-coding common_peak1_17_84_0.0952944257349655_6.45703814900518_0.361847447176661 chr5 21251521 21251912 + 0.361847447176661 NA intron (NM_175437, intron 16 of 30) B1_Mus2|SINE|Alu 65449 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_17_84_0.0952944257349655_6.45703814900518_0.361847447176661-2 chr5 63969081 63969601 + 0.361847447176661 NA promoter-TSS (NM_145923) promoter-TSS (NM_145923) -444 NM_145923 100532 Mm.243632 NM_145923 ENSMUSG00000047881 Rell1 AA536743 RELT-like 1 protein-coding unique_peak2_17_84_0.0952944257349655_6.45703814900518_0.361847447176661-2 chr12 77177599 77178442 + 0.361847447176661 NA Intergenic Intergenic -60084 NM_001252614 53618 Mm.35628 NM_016893 ENSMUSG00000021065 Fut8 - fucosyltransferase 8 protein-coding common_peak1_146_1220_-0.0328367319234353_10.2374291190257_0.361839595116071 chr1 131910385 131911508 + 0.361839595116071 NA intron (NM_001145804, intron 1 of 6) CpG 488 NM_001145804 98415 Mm.246869 NM_175294 ENSMUSG00000026434 Nucks1 2700010L10Rik|8430423A01Rik|AI647518|C78391|Nucks nuclear casein kinase and cyclin-dependent kinase substrate 1 protein-coding common_peak1_309_3022_-0.0203651608287245_11.5515826832133_0.361837483592607 chr3 136669153 136671076 + 0.361837483592607 NA promoter-TSS (NM_008913) promoter-TSS (NM_008913) 48 NM_001293622 19055 Mm.331389 NM_008913 ENSMUSG00000028161 Ppp3ca 2900074D19Rik|CN|Caln|Calna|CnA protein phosphatase 3, catalytic subunit, alpha isoform protein-coding common_peak1_105_778_0.0368745585677992_9.62391679734557_0.361755907939692 chr9 46272568 46273981 + 0.361755907939692 NA exon (NM_011752, exon 1 of 14) exon (NM_011752, exon 1 of 14) 210 NM_011752 22687 Mm.17519 NM_011752 ENSMUSG00000032078 Zpr1 AI303781|Zfp259|Znf259 ZPR1 zinc finger protein-coding common_peak1_31_174_0.071654462479195_7.48703834307193_0.361693539789299 chr12 75727267 75727923 + 0.361693539789299 NA intron (NM_030750, intron 1 of 2) intron (NM_030750, intron 1 of 2) 8134 NM_030750 81535 Mm.280199 NM_030750 ENSMUSG00000021054 Sgpp1 AI463453|SPP|SPP1|Spph1 sphingosine-1-phosphate phosphatase 1 protein-coding common_peak1_42_252_0.0627335955596404_8.01436037247413_0.361634689221657-2 chr11 6365390 6366222 + 0.361634689221657 NA Intergenic B1_Mus1|SINE|Alu -29319 NM_001005867 52915 Mm.1144 NM_028601 ENSMUSG00000041164 Zmiz2 Zimp7 zinc finger, MIZ-type containing 2 protein-coding common_peak2_42_252_0.0627335955596404_8.01436037247413_0.361634689221657 chr6 137754340 137755226 + 0.361634689221657 NA intron (NM_172733, intron 1 of 8) intron (NM_172733, intron 1 of 8) 206 NM_172733 232449 Mm.29181 NM_172733 ENSMUSG00000030225 Dera 2010002D22Rik|2500002K03Rik|DEOC deoxyribose-phosphate aldolase (putative) protein-coding common_peak1_42_252_0.0627335955596404_8.01436037247413_0.361634689221657 chr1 67038418 67039339 + 0.361634689221657 NA promoter-TSS (NM_021295) promoter-TSS (NM_021295) -6 NM_021295 14768 Mm.20522 NM_021295 ENSMUSG00000026000 Lancl1 AW124738|Gpr69|Gpr69a|p40 LanC (bacterial lantibiotic synthetase component C)-like 1 protein-coding common_peak2_131_1022_0.0319541402882617_10.0145674998895_0.361513370236376 chr19 40475697 40479483 + 0.361513370236376 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -26192 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_48_297_0.0577077164485225_8.24802237868642_0.361492416855887 chr5 21354688 21355895 + 0.361492416855887 NA intron (NM_029195, intron 2 of 18) L1M4|LINE|L1 -17382 NM_008013 14190 Mm.292100 NM_008013 ENSMUSG00000039899 Fgl2 AI385601|musfiblp fibrinogen-like protein 2 protein-coding common_peak1_35_223_-0.0760572489985805_7.76932629755831_0.361438310863636 chr4 43455900 43456500 + 0.361438310863636 NA Intergenic Intergenic -1574 NM_007654 12517 Mm.188157 NM_007654 ENSMUSG00000028459 Cd72 CD72c|Ly-19|Ly-32|Ly-m19|Lyb-2 CD72 antigen protein-coding common_peak2_82_574_0.0420877233366106_9.18846200750004_0.361371763059138 chr4 44071697 44073377 + 0.361371763059138 NA 5' UTR (NM_001190414, exon 1 of 12) 5' UTR (NM_001190414, exon 1 of 12) 136 NM_001190414 50798 Mm.256718 NM_015828 ENSMUSG00000028479 Gne 2310066H07Rik|DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding common_peak1_82_574_0.0420877233366106_9.18846200750004_0.361371763059138 chr5 129886852 129887513 + 0.361371763059138 NA intron (NM_024166, intron 1 of 3) CpG 288 NM_024166 14004 Mm.30133 NM_024166 ENSMUSG00000070493 Chchd2 AL033347|Etohi6 coiled-coil-helix-coiled-coil-helix domain containing 2 protein-coding common_peak2_266_2445_0.0209441963900847_11.2666807867224_0.361366380287472 chr8 105699959 105702291 + 0.361366380287472 NA promoter-TSS (NM_001047435) promoter-TSS (NM_001047435) -23 NM_001047436 56513 Mm.472753 NM_019695 ENSMUSG00000005699 Pard6a 0710008C04Rik|2610010A15Rik|PAR-6A|PAR6alpha|Par-6|Par6|Par6c|TAX40|Tip-40 par-6 family cell polarity regulator alpha protein-coding common_peak1_59_413_-0.0582182137152643_8.66437785064169_0.361277733326472 chr9 116368625 116369646 + 0.361277733326472 NA Intergenic Intergenic -193772 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak2_80_593_-0.0479770378078879_9.19033060189682_0.361268429926303 chr17 23598200 23600331 + 0.361268429926303 NA 5' UTR (NM_011747, exon 1 of 6) 5' UTR (NM_011747, exon 1 of 6) 222 NM_011747 22654 Mm.40326 NM_011747 ENSMUSG00000062012 Zfp13 4933429B21|AI835008|Krox-8|Rhit|Zfp-13 zinc finger protein 13 protein-coding common_peak2_129_1051_-0.0353921577730496_10.0212229104058_0.361222291935964 chr1 180725368 180727144 + 0.361222291935964 NA exon (NM_133225, exon 1 of 8) exon (NM_133225, exon 1 of 8) 213 NM_133225 170760 Mm.272981 NM_133225 ENSMUSG00000026499 Acbd3 60kDa|8430407O11Rik|D1Ertd10e|GCP60|GOLPH1|Gocap1|Pap7 acyl-Coenzyme A binding domain containing 3 protein-coding common_peak1_16_92_-0.135622550133859_6.4713475360411_0.361159883654836-3 chr9 90263930 90264257 + 0.361159883654836 NA intron (NM_194334, intron 1 of 12) intron (NM_194334, intron 1 of 12) 6676 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding unique_peak2_16_92_-0.135622550133859_6.4713475360411_0.361159883654836 chr10 19718887 19719571 + 0.361159883654836 NA intron (NM_172786, intron 1 of 6) intron (NM_172786, intron 1 of 6) 6642 NM_172786 237313 Mm.234667 NM_172786 ENSMUSG00000020007 Il20ra E230031K19 interleukin 20 receptor, alpha protein-coding common_peak1_16_92_-0.135622550133859_6.4713475360411_0.361159883654836 chr1 21304849 21305270 + 0.361159883654836 NA Intergenic B3|SINE|B2 -6747 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo common_peak1_16_92_-0.135622550133859_6.4713475360411_0.361159883654836-2 chr11 54972166 54972525 + 0.361159883654836 NA Intergenic Intergenic -9405 NM_001271455 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak2_61_399_0.0494383261459372_8.66857535284769_0.361129505567943 chr12 91848361 91849304 + 0.361129505567943 NA intron (NM_011344, intron 1 of 20) CpG 325 NM_001039089 20338 Mm.250605 NM_011344 ENSMUSG00000020964 Sel1l AW493766|Sel1h|mKIAA4137 sel-1 suppressor of lin-12-like (C. elegans) protein-coding common_peak2_61_399_0.0494383261459372_8.66857535284769_0.361129505567943-2 chr2 75720004 75721334 + 0.361129505567943 NA Intergenic T-rich|Low_complexity|Low_complexity -16006 NM_010902 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding common_peak2_106_787_0.0369185998993977_9.64051111940607_0.361070560009336 chr11 80507493 80509694 + 0.361070560009336 NA non-coding (NR_126552, exon 1 of 3) non-coding (NR_126552, exon 1 of 3) 513 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA common_peak2_66_471_-0.0520993492121171_8.85659337475578_0.36106504973557 chr14 20177011 20179759 + 0.36106504973557 NA intron (NM_021542, intron 1 of 4) B4|SINE|B4 3397 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak2_68_456_0.0465449651887244_8.85932283765243_0.360935651006072 chr5 143463844 143465306 + 0.360935651006072 NA promoter-TSS (NM_144915) promoter-TSS (NM_144915) 82 NM_144915 231871 Mm.469963 NM_144915 ENSMUSG00000039206 Daglb E330036I19Rik diacylglycerol lipase, beta protein-coding common_peak1_98_715_0.0376386865499079_9.50263512053921_0.360934582378625 chrX 7721530 7722490 + 0.360934582378625 NA promoter-TSS (NM_172372) promoter-TSS (NM_172372) -210 NM_172372 54636 Mm.305725 NM_172372 ENSMUSG00000039382 Wdr45 C79260|DXImx38e|JM5|Sfc19|WIPI-4|Wdrx1 WD repeat domain 45 protein-coding common_peak2_88_664_-0.0441921616243643_9.35511444957637_0.360917624986896 chr3 19428812 19431143 + 0.360917624986896 NA Intergenic Intergenic -78618 NM_001163536 66326 Mm.45615 NM_025489 ENSMUSG00000027606 Dnajc5b 1700008A05Rik DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding common_peak1_180_1512_0.0260110432596239_10.5762017938466_0.360847740831199 chr1 190927958 190929641 + 0.360847740831199 NA intron (NR_037579, intron 1 of 7) CpG 294 NR_037579 52477 Mm.289914 NM_021421 ENSMUSG00000026634 Angel2 2610307I21Rik|5730410O10Rik|AI845692|D1Ertd396e|D1Ertd654e angel homolog 2 protein-coding common_peak1_53_363_-0.0589747621727454_8.47830725911232_0.360810335839549 chr7 19458094 19458973 + 0.360810335839549 NA promoter-TSS (NM_172279) promoter-TSS (NM_172279) -39 NM_172279 232944 Mm.260504 NM_172279 ENSMUSG00000030397 Mark4 2410090P21Rik|C79806|Markl1 MAP/microtubule affinity regulating kinase 4 protein-coding common_peak1_30_187_-0.0879066469433312_7.51063552820597_0.360693337461931-2 chr9 65293534 65294152 + 0.360693337461931 NA promoter-TSS (NM_001044389) promoter-TSS (NM_001044389) -417 NM_001044389 270166 Mm.30088 NM_011802 ENSMUSG00000015357 Clpx AU014732|E330029I21 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding common_peak2_30_187_-0.0879066469433312_7.51063552820597_0.360693337461931-2 chr8 84207216 84208561 + 0.360693337461931 NA promoter-TSS (NR_029740) promoter-TSS (NR_029740) -630 NR_029740 387216 NR_029740 ENSMUSG00000065611 Mir23a Mirn23a|mir-23a|mmu-mir-23a microRNA 23a ncRNA common_peak2_30_187_-0.0879066469433312_7.51063552820597_0.360693337461931 chr11 79652640 79653746 + 0.360693337461931 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) 21893 NR_045898 72218 Mm.443271 NR_045898 ENSMUSG00000086569 Rab11fip4os2 1700020F10Rik|4930542H20Rik|Rab11fib4os2 RAB11 family interacting protein 4 (class II), opposite strand 2 ncRNA common_peak1_30_187_-0.0879066469433312_7.51063552820597_0.360693337461931 chr8 61451107 61451527 + 0.360693337461931 NA Intergenic Intergenic -36417 NM_145595 234309 Mm.29059 NM_145595 ENSMUSG00000031641 Cbr4 A730083J17Rik|BC009118 carbonyl reductase 4 protein-coding unique_peak2_30_187_-0.0879066469433312_7.51063552820597_0.360693337461931 chrX 57252987 57254317 + 0.360693337461931 NA intron (NM_152801, intron 10 of 21) intron (NM_152801, intron 10 of 21) 41509 NM_011616 21947 Mm.4861 NM_011616 ENSMUSG00000031132 Cd40lg CD154|CD40-L|Cd40l|HIGM1|IGM|IMD3|Ly-62|Ly62|T-BAM|TRAP|Tnfsf5|Tnlg8b|gp39 CD40 ligand protein-coding common_peak2_25_152_-0.10196659805172_7.20640454366679_0.360662728089554 chr17 25773680 25774388 + 0.360662728089554 NA intron (NM_026238, intron 1 of 10) intron (NM_026238, intron 1 of 10) 258 NM_026238 67563 Mm.24201 NM_026238 ENSMUSG00000002280 Narfl 9030612I22Rik|AI504405|PRN nuclear prelamin A recognition factor-like protein-coding common_peak1_25_152_-0.10196659805172_7.20640454366679_0.360662728089554 chr14 73045550 73046089 + 0.360662728089554 NA intron (NM_001162412, intron 2 of 4) ID|SINE|ID 3295 NM_133720 70086 Mm.158324 NM_133720 ENSMUSG00000033470 Cysltr2 2300001H05Rik|CYSLT2R|Cltr2|Cyslt2 cysteinyl leukotriene receptor 2 protein-coding common_peak1_25_152_-0.10196659805172_7.20640454366679_0.360662728089554-2 chr5 62723554 62724148 + 0.360662728089554 NA intron (NM_178407, intron 6 of 32) intron (NM_178407, intron 6 of 32) 42326 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak2_151_1218_0.0287187263357449_10.2658417737881_0.360653985705222 chr6 100286291 100288108 + 0.360653985705222 NA intron (NM_019743, intron 1 of 4) CpG 159 NM_019743 56353 Mm.321633 NM_019743 ENSMUSG00000072872 Rybp 2410018J24Rik|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding common_peak2_411_4177_0.0161757290823434_12.0366846416083_0.360576527993873 chr9 113704267 113708868 + 0.360576527993873 NA intron (NM_001164678, intron 1 of 17) intron (NM_001164678, intron 1 of 17) 1692 NM_001164678 18571 Mm.29816 NM_011052 ENSMUSG00000032504 Pdcd6ip AI480591|AW544830|Aip1|Alix|C76364|Eig2|mKIAA1375 programmed cell death 6 interacting protein protein-coding common_peak1_47_315_-0.0633929688986505_8.27208426372778_0.360512328613703 chr16 96127156 96127976 + 0.360512328613703 NA intron (NM_008251, intron 1 of 5) CpG-5899 159 NM_008251 15312 Mm.2756 NM_008251 ENSMUSG00000040681 Hmgn1 HMG-14|Hmg14 high mobility group nucleosomal binding domain 1 protein-coding common_peak2_41_269_-0.072728642065977_8.04045127601784_0.360482306841767 chr18 64488316 64489691 + 0.360482306841767 NA promoter-TSS (NM_007998) promoter-TSS (NM_007998) 63 NM_007998 14151 Mm.1070 NM_007998 ENSMUSG00000024588 Fech AI894116|Fcl|fch ferrochelatase protein-coding common_peak1_41_269_-0.072728642065977_8.04045127601784_0.360482306841767 chr2 121354685 121355341 + 0.360482306841767 NA Intergenic Intergenic -3628 NM_009897 12716 Mm.252145 NM_009897 ENSMUSG00000000308 Ckmt1 Mt-CK|ScCKmit|UbCKmit|mi-CK creatine kinase, mitochondrial 1, ubiquitous protein-coding common_peak1_55_351_0.053745442566985_8.48630433992079_0.360476324767508 chr5 74092942 74093534 + 0.360476324767508 NA promoter-TSS (NR_031758) promoter-TSS (NR_031758) 155 NR_015531 70036 Mm.46547 NR_015531 ENSMUSG00000053656 Dancr 2700023E23Rik differentiation antagonizing non-protein coding RNA ncRNA common_peak2_133_1041_0.0320164490575721_10.0411477868073_0.360421979613676 chr11 109494316 109497254 + 0.360421979613676 NA intron (NM_028710, intron 4 of 13) intron (NM_028710, intron 4 of 13) -22189 NM_001029842 104681 Mm.265874 NM_134038 ENSMUSG00000041920 Slc16a6 AW743111|ESTM12|MCT 6|MCT 7|MCT6 solute carrier family 16 (monocarboxylic acid transporters), member 6 protein-coding common_peak2_149_1249_-0.0309503600734242_10.2722371995127_0.360412779421443 chr5 9106260 9109824 + 0.360412779421443 NA intron (NM_001081029, intron 2 of 4) MIRb|SINE|MIR 7305 NM_001081029 652925 Mm.439954 NM_001081029 ENSMUSG00000079659 Tmem243 4930420K17Rik|E030031F02Rik transmembrane protein 243, mitochondrial protein-coding common_peak2_37_216_0.0654252821387669_7.79426387351386_0.360347189427965 chr19 57088040 57089704 + 0.360347189427965 NA intron (NM_001290813, intron 6 of 20) intron (NM_001290813, intron 6 of 20) 30152 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_37_216_0.0654252821387669_7.79426387351386_0.360347189427965-2 chr4 88799343 88800310 + 0.360347189427965 NA promoter-TSS (NM_001161610) promoter-TSS (NM_001161610) 251 NM_001085533 545652 Mm.457965 NM_001085533 ENSMUSG00000099518 Gm13275 OTTMUSG00000011268 predicted gene 13275 protein-coding common_peak2_37_216_0.0654252821387669_7.79426387351386_0.360347189427965-3 chr7 75374029 75375521 + 0.360347189427965 NA Intergenic Intergenic -65513 NM_153579 64176 Mm.273082 NM_153579 ENSMUSG00000053025 Sv2b A830038F04Rik|AI850768|mKIAA0735 synaptic vesicle glycoprotein 2 b protein-coding common_peak1_221_2012_-0.0246009783702874_10.9628309677362_0.360282323421653 chr7 47012743 47014971 + 0.360282323421653 NA Intergenic Intergenic -5443 NM_175318 101685 Mm.155687 NM_175318 ENSMUSG00000049516 Spty2d1 5830435K17Rik|AI852426|P16H6 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) protein-coding common_peak1_105_820_-0.038884335148337_9.66179624420364_0.36018047046385 chr11 52265883 52267025 + 0.36018047046385 NA intron (NM_001313981, intron 3 of 10) intron (NM_001313981, intron 3 of 10) 16141 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak2_172_1429_0.0274110998267965_10.4955049815792_0.360020331011625 chr9 85326063 85328634 + 0.360020331011625 NA promoter-TSS (NM_001160378) promoter-TSS (NM_001160378) -198 NM_001160379 212943 Mm.74610 NM_001160378 ENSMUSG00000032265 Fam46a BAP014|D930050G01Rik family with sequence similarity 46, member A protein-coding common_peak1_62_407_0.0491838179802873_8.69701725096164_0.359969435418407 chr1 60566071 60567012 + 0.359969435418407 NA intron (NM_001045513, intron 1 of 13) CpG 224 NM_001045513 77300 Mm.440325 NM_001045513 ENSMUSG00000026014 Raph1 9430025M21Rik|C730009O10Rik|Lpd Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding common_peak2_67_480_-0.0531322004231587_8.88332698355846_0.35992020283192 chr11 78261041 78262656 + 0.35992020283192 NA promoter-TSS (NM_001002004) promoter-TSS (NM_001002004) 94 NM_001002004 72503 Mm.237103 NM_001002004 ENSMUSG00000010277 2610507B11Rik AU022687|D11Bhm178e|D11Bhm179e|E1|Kiaa0100|mKIAA0100 RIKEN cDNA 2610507B11 gene protein-coding common_peak2_69_464_0.0469711197144953_8.88457246585264_0.35992020283192 chr10 128820943 128822617 + 0.35992020283192 NA promoter-TSS (NM_025364) promoter-TSS (NM_025364) 9 NM_025364 66118 Mm.235562 NM_025364 ENSMUSG00000078427 Sarnp 1110005A23Rik|Cip29 SAP domain containing ribonucleoprotein protein-coding common_peak1_43_260_0.0585040573104223_8.0571580252251_0.359811677650963 chr14 54229268 54230091 + 0.359811677650963 NA Intergenic B1_Mus1|SINE|Alu 24250 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_257_2416_-0.0225277601719931_11.2277378776796_0.359709200640438 chr7 123216400 123221262 + 0.359709200640438 NA intron (NM_146198, intron 1 of 16) intron (NM_146198, intron 1 of 16) 3965 NM_146198 233836 Mm.211838 NM_146198 ENSMUSG00000030769 Slc5a11 2010013B02Rik|Kst1|RKST2|SMIT2|Slc5a10 solute carrier family 5 (sodium/glucose cotransporter), member 11 protein-coding common_peak1_54_371_-0.0578677927221154_8.51022491474697_0.359496318386178 chr8 94214324 94215308 + 0.359496318386178 NA intron (NM_172410, intron 1 of 22) CpG 215 NM_172410 71805 Mm.458170 NM_172410 ENSMUSG00000032939 Nup93 2410008G02Rik nucleoporin 93 protein-coding unique_peak2_32_181_0.0695253074621833_7.54255729392979_0.359409942237543 chr6 31099847 31101342 + 0.359409942237543 NA intron (NR_110471, intron 3 of 3) intron (NR_110471, intron 3 of 3) -37501 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_36_231_-0.0781973439161616_7.81888232316949_0.359294789129917 chr16 38376345 38377104 + 0.359294789129917 NA intron (NM_001081984, intron 3 of 3) intron (NM_001081984, intron 3 of 3) 14534 NM_022318 64082 Mm.390856 NM_022318 ENSMUSG00000022803 Popdc2 AV006127|Pop2 popeye domain containing 2 protein-coding common_peak1_36_231_-0.0781973439161616_7.81888232316949_0.359294789129917-2 chr7 102316951 102317901 + 0.359294789129917 NA intron (NM_009287, intron 1 of 11) (T)n|Simple_repeat|Simple_repeat 49602 NM_009287 20866 Mm.645 NM_009287 ENSMUSG00000030987 Stim1 SIM stromal interaction molecule 1 protein-coding common_peak1_142_1179_-0.0323807976667769_10.1883807454158_0.359203858966773 chr10 86777892 86779693 + 0.359203858966773 NA promoter-TSS (NM_175331) promoter-TSS (NM_175331) -213 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding common_peak2_75_548_-0.0470735132355955_9.0771255823874_0.359193247933376 chr2 84424495 84426124 + 0.359193247933376 NA promoter-TSS (NM_018782) promoter-TSS (NM_018782) -43 NM_018782 54598 Mm.75467 NM_018782 ENSMUSG00000059588 Calcrl AV071593|CRLR calcitonin receptor-like protein-coding common_peak1_21_124_-0.105986541968136_6.91279101367802_0.358946654673698-4 chr6 40470831 40471241 + 0.358946654673698 NA promoter-TSS (NM_028358) promoter-TSS (NM_028358) -379 NM_212468 381760 Mm.276356 NM_028358 ENSMUSG00000029911 Ssbp1 2810480P10Rik|G630031O20Rik|MtSSB|mtDBP single-stranded DNA binding protein 1 protein-coding common_peak1_21_124_-0.105986541968136_6.91279101367802_0.358946654673698-3 chr2 11190321 11190818 + 0.358946654673698 NA intron (NM_008859, intron 1 of 17) B3|SINE|B2 18187 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_21_124_-0.105986541968136_6.91279101367802_0.358946654673698 chr10 96586910 96587476 + 0.358946654673698 NA Intergenic Intergenic -29808 NM_007569 12226 Mm.23811 NM_007569 ENSMUSG00000036478 Btg1 AI426953|AW546738 B cell translocation gene 1, anti-proliferative protein-coding unique_peak2_21_124_-0.105986541968136_6.91279101367802_0.358946654673698 chr17 8988201 8988963 + 0.358946654673698 NA intron (NM_025851, intron 1 of 9) intron (NM_025851, intron 1 of 9) 249 NM_025851 66931 Mm.67591 NM_025851 ENSMUSG00000023873 1700010I14Rik - RIKEN cDNA 1700010I14 gene protein-coding unique_peak2_21_124_-0.105986541968136_6.91279101367802_0.358946654673698-2 chr3 103871436 103872728 + 0.358946654673698 NA intron (NR_104070, intron 3 of 22) intron (NR_104070, intron 3 of 22) 11805 NM_008979 19260 Mm.395 NM_008979 ENSMUSG00000027843 Ptpn22 70zpep|PEP|Ptpn8 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) protein-coding common_peak1_21_124_-0.105986541968136_6.91279101367802_0.358946654673698-2 chr11 52274237 52274644 + 0.358946654673698 NA intron (NM_001313981, intron 3 of 10) intron (NM_001313981, intron 3 of 10) 8155 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak1_42_276_-0.0680149957952381_8.07973466815157_0.358940693446118 chr13 94788863 94789658 + 0.358940693446118 NA intron (NM_009321, intron 1 of 3) CpG 317 NM_009321 21371 Mm.379025 NM_009321 ENSMUSG00000042043 Tbca Tbca13 tubulin cofactor A protein-coding common_peak2_68_488_-0.0510953347054386_8.90814298759951_0.358938607712418 chr10 80655860 80657339 + 0.358938607712418 NA 5' UTR (NM_145361, exon 1 of 9) 5' UTR (NM_145361, exon 1 of 9) 472 NM_145361 208198 Mm.60720 NM_145361 ENSMUSG00000003344 Btbd2 2610037C03Rik|4930512K17Rik BTB (POZ) domain containing 2 protein-coding common_peak1_70_473_0.0444162969487589_8.91095139737264_0.358818204473038 chr1 92103071 92104219 + 0.358818204473038 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 76696 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_101_742_0.0370646877752172_9.5557507444262_0.35878362364817 chr4 6475601 6476722 + 0.35878362364817 NA Intergenic Intergenic -21890 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding common_peak1_118_899_0.0332911790226067_9.83042678072834_0.358778250744008 chr7 120703930 120705731 + 0.358778250744008 NA intron (NM_001164580, intron 1 of 2) intron (NM_001164580, intron 1 of 2) 27210 NM_001164580 233812 Mm.276479 NM_001164580 ENSMUSG00000046096 BC030336 - cDNA sequence BC030336 protein-coding common_peak2_83_619_-0.0454251391030276_9.25341183572272_0.358700699627253 chr3 96057305 96059128 + 0.358700699627253 NA 5' UTR (NM_013841, exon 1 of 15) 5' UTR (NM_013841, exon 1 of 15) 239 NM_013841 22365 Mm.263185 NM_013841 ENSMUSG00000015747 Vps45 AI462172|AW554165|mVps45 vacuolar protein sorting 45 protein-coding common_peak2_204_1826_-0.0257120666837416_10.8224048852856_0.358660773837441 chr16 77013194 77016857 + 0.358660773837441 NA intron (NM_013918, intron 1 of 23) intron (NM_013918, intron 1 of 23) 956 NM_013918 30940 Mm.40986 NM_013918 ENSMUSG00000022867 Usp25 - ubiquitin specific peptidase 25 protein-coding unique_peak2_38_223_0.0655885275502568_7.84014918583273_0.358529675895058 chr1 144319223 144320188 + 0.358529675895058 NA Intergenic Intergenic -70601 NM_015811 50778 Mm.103701 NM_015811 ENSMUSG00000026358 Rgs1 BL34 regulator of G-protein signaling 1 protein-coding common_peak2_163_1392_-0.0293116551631147_10.4293237150197_0.358448519104397 chr17 24453810 24456238 + 0.358448519104397 NA intron (NM_001301784, intron 1 of 13) intron (NM_001301784, intron 1 of 13) 368 NM_001301784 13560 Mm.163132 NM_007893 ENSMUSG00000024137 E4f1 p120E4F|phi-AP3 E4F transcription factor 1 protein-coding unique_peak2_26_158_-0.0906753884447609_7.26754526106198_0.358331125237602 chr1 152253220 152254544 + 0.358331125237602 NA Intergenic Intergenic 132800 NM_025677 66637 Mm.379120 NM_025677 ENSMUSG00000014980 Tsen15 5730449L18Rik|AL023077|Sen15 tRNA splicing endonuclease subunit 15 protein-coding common_peak1_26_158_-0.0906753884447609_7.26754526106198_0.358331125237602 chr2 163712809 163713320 + 0.358331125237602 NA intron (NM_001277096, intron 2 of 3) intron (NM_001277096, intron 2 of 3) 19027 NM_011106 18769 Mm.10091 NM_011106 ENSMUSG00000035268 Pkig PKIgamma protein kinase inhibitor, gamma protein-coding common_peak1_26_158_-0.0906753884447609_7.26754526106198_0.358331125237602-2 chr9 75361826 75362445 + 0.358331125237602 NA Intergenic Intergenic 14377 NM_013479 12049 Mm.25988 NM_013479 ENSMUSG00000032191 Bcl2l10 AA420380|AU023065|Boo|C85687|Diva Bcl2-like 10 protein-coding common_peak2_44_267_0.0600894471068596_8.0961339140112_0.358304209086338 chr3 97628389 97629331 + 0.358304209086338 NA promoter-TSS (NM_001161765) promoter-TSS (NM_001161765) 22 NM_010232 14263 Mm.385180 NM_010232 ENSMUSG00000028088 Fmo5 5033418D19Rik|AI195026 flavin containing monooxygenase 5 protein-coding common_peak2_55_379_-0.0566785471266655_8.54151633476761_0.358238828044903 chr6 72880751 72882541 + 0.358238828044903 NA intron (NM_019715, intron 1 of 6) intron (NM_019715, intron 1 of 6) 18333 NM_019715 74287 Mm.29194 NM_019715 ENSMUSG00000055239 Kcmf1 1700094M07Rik|Debt91|Pmcf potassium channel modulatory factor 1 protein-coding common_peak2_287_2761_-0.0203629976399586_11.4213161054381_0.358207808431884 chr2 104492919 104495255 + 0.358207808431884 NA 5' UTR (NM_001145824, exon 1 of 16) 5' UTR (NM_001145824, exon 1 of 16) 402 NM_010434 15259 Mm.257925 NM_010434 ENSMUSG00000027177 Hipk3 DYRK6|FIST3|PKY|mir-1902 homeodomain interacting protein kinase 3 protein-coding common_peak1_108_848_-0.0378785080234021_9.71068148954134_0.358202796934822 chr19 45074416 45075661 + 0.358202796934822 NA Intergenic CpG -1101 NM_178929 107250 Mm.24417 NM_178929 ENSMUSG00000025213 Kazald1 AI842353|Bono1|IGFBP-rP10 Kazal-type serine peptidase inhibitor domain 1 protein-coding unique_peak1_10_45_0.109623475450583_5.5783736937823_0.358200417993057 chr17 50569002 50569385 + 0.358200417993057 NA intron (NM_013880, intron 1 of 5) intron (NM_013880, intron 1 of 5) 59646 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak2_254_2311_0.0208506815050988_11.1853510232532_0.358150003048205 chr17 35257209 35260566 + 0.358150003048205 NA Intergenic Intergenic -4207 NM_010380 14964 Mm.439675 NM_010380 ENSMUSG00000073411 H2-D1 H-2D|H2-D histocompatibility 2, D region locus 1 protein-coding common_peak1_195_1729_-0.0264554632406906_10.7433285909037_0.35804137593599 chr16 49857756 49860487 + 0.35804137593599 NA intron (NM_010581, intron 1 of 9) intron (NM_010581, intron 1 of 9) 3467 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_195_1729_-0.0264554632406906_10.7433285909037_0.35804137593599-2 chr2 143838029 143840269 + 0.35804137593599 NA intron (NM_001291061, intron 5 of 7) Charlie4a|DNA|hAT-Charlie 24024 NM_009751 12075 Mm.275937 NM_009751 ENSMUSG00000027420 Bfsp1 CP95 beaded filament structural protein 1, in lens-CP94 protein-coding common_peak1_177_1481_0.0263009476447102_10.5464802061282_0.35796843219741 chr11 74554443 74556870 + 0.35796843219741 NA intron (NM_001015046, intron 2 of 24) B3|SINE|B2 34502 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_100_773_-0.0393415625389526_9.57651897487493_0.357950954509311 chr12 111907194 111908820 + 0.357950954509311 NA promoter-TSS (NM_011625) promoter-TSS (NM_011625) 48 NM_011625 21981 Mm.313076 NM_011625 ENSMUSG00000021285 Ppp1r13b AI449786|ASPP1|AW545810|Tp53bp2|Trp53bp2|p85 protein phosphatase 1, regulatory (inhibitor) subunit 13B protein-coding common_peak1_18_90_0.092569563198194_6.55407942179779_0.357942835868104-2 chr2 160951173 160951624 + 0.357942835868104 NA intron (NM_173368, intron 36 of 36) intron (NM_173368, intron 36 of 36) -39059 NM_182840 280635 Mm.330747 NM_182840 ENSMUSG00000050700 Emilin3 1110013O17Rik|EMILIN-3|EMILIN-5|EMILIN-T|Emilin5 elastin microfibril interfacer 3 protein-coding common_peak1_18_90_0.092569563198194_6.55407942179779_0.357942835868104 chr2 28180320 28180654 + 0.357942835868104 NA Intergenic RLTR24|LTR|ERV1 -12606 NM_001038613 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding common_peak1_94_680_0.0369588022631397_9.42999038914364_0.357877446268873 chr2 128189320 128190352 + 0.357877446268873 NA Intergenic Intergenic 62261 NM_001284410 12125 Mm.141083 NM_009754 ENSMUSG00000027381 Bcl2l11 1500006F24Rik|Bim|Bod|bcl2-L-11 BCL2-like 11 (apoptosis facilitator) protein-coding common_peak2_111_834_0.034156985029222_9.72271087987603_0.357728871156295 chr7 101355930 101358577 + 0.357728871156295 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) 9184 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak2_165_1412_-0.028427569979236_10.4503319653443_0.357627348993881 chr19 47536304 47538156 + 0.357627348993881 NA promoter-TSS (NM_175360) promoter-TSS (NM_175360) -210 NM_175360 108689 Mm.218048 NM_175360 ENSMUSG00000042694 Obfc1 0610009H20Rik|2310057J23Rik|AAF-44|AAF44|AI413458|RPA-32 oligonucleotide/oligosaccharide-binding fold containing 1 protein-coding common_peak2_49_331_-0.0624119280241846_8.34383346733483_0.35757905296055 chr17 48299800 48301563 + 0.35757905296055 NA intron (NM_001033405, intron 1 of 4) intron (NM_001033405, intron 1 of 4) 643 NM_001033405 328833 Mm.329104 NM_001033405 ENSMUSG00000071068 Treml2 AW049306|Gm750|Tlt2 triggering receptor expressed on myeloid cells-like 2 protein-coding common_peak2_37_238_-0.0738902933975023_7.863921661282_0.35754024787562 chr2 151979499 151980732 + 0.35754024787562 NA 5' UTR (NM_146127, exon 1 of 2) 5' UTR (NM_146127, exon 1 of 2) 104 NM_146127 73847 Mm.272444 NM_028666 ENSMUSG00000027459 Fam110a 1700008J10Rik|5430432M24Rik|AI747080 family with sequence similarity 110, member A protein-coding unique_peak2_37_238_-0.0738902933975023_7.863921661282_0.35754024787562 chr6 43382021 43383574 + 0.35754024787562 NA intron (NM_001311111, intron 7 of 7) intron (NM_001311111, intron 7 of 7) -59632 NR_045988 319812 Mm.446393 NR_045988 9430018G01Rik - RIKEN cDNA 9430018G01 gene ncRNA common_peak1_37_238_-0.0738902933975023_7.863921661282_0.35754024787562 chr11 54936830 54937839 + 0.35754024787562 NA intron (NM_001271455, intron 4 of 17) B4A|SINE|B4 25606 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak2_278_2656_-0.0206312754496327_11.3652668747657_0.357385827044057 chr14 46820456 46822911 + 0.357385827044057 NA intron (NM_022023, intron 1 of 6) intron (NM_022023, intron 1 of 6) 559 NM_022023 63985 Mm.87312 NM_022023 ENSMUSG00000062014 Gmfb 3110001H22Rik|3110001O16Rik|AI851627|C79176|D14Ertd630e glia maturation factor, beta protein-coding common_peak1_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-8 chr7 44839766 44840102 + 0.357340306497258 NA TTS (NM_001042655) TTS (NM_001042655) 3646 NM_010215 14204 Mm.2565 NM_010215 ENSMUSG00000074141 Il4i1 Fig1|Fig1-ps|LAAO|LAO interleukin 4 induced 1 protein-coding common_peak1_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-5 chr17 44653910 44654298 + 0.357340306497258 NA intron (NM_001271631, intron 2 of 4) intron (NM_001271631, intron 2 of 4) 82072 NR_073425 12393 Mm.391013 NM_009820 ENSMUSG00000039153 Runx2 AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a runt related transcription factor 2 protein-coding unique_peak2_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-6 chrX 53056569 53057243 + 0.357340306497258 NA intron (NR_038184, intron 1 of 3) CpG 284 NR_038185 72575 Mm.59516 NR_038184 C430049B03Rik 2700063P19Rik|9430052C07Rik|mir-322|mir-351|mir-503 RIKEN cDNA C430049B03 gene ncRNA common_peak1_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-2 chr13 54191928 54192305 + 0.357340306497258 NA promoter-TSS (NM_008286) promoter-TSS (NM_008286) -13 NM_001010973 15466 Mm.57243 NM_008286 ENSMUSG00000034987 Hrh2 - histamine receptor H2 protein-coding common_peak1_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-3 chr15 64067104 64067515 + 0.357340306497258 NA Intergenic ID4_|SINE|ID -6861 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding unique_peak2_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-3 chr19 5743818 5744439 + 0.357340306497258 NA intron (NM_008520, intron 2 of 27) intron (NM_008520, intron 2 of 27) 3224 NM_008520 16998 Mm.182396 NM_008520 ENSMUSG00000024940 Ltbp3 Ltbp2|mFLJ00070 latent transforming growth factor beta binding protein 3 protein-coding common_peak1_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-4 chr16 91423856 91424321 + 0.357340306497258 NA intron (NM_008349, intron 6 of 6) intron (NM_008349, intron 6 of 6) 17853 NM_008349 16155 Mm.4154 NM_008349 ENSMUSG00000022969 Il10rb 6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2 interleukin 10 receptor, beta protein-coding unique_peak2_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-4 chr5 94517773 94518692 + 0.357340306497258 NA Intergenic MMVL30-int|LTR|ERV1 -8052 NM_001243938 100041102 Mm.420028 NM_001243937 ENSMUSG00000095074 Gm3139 - predicted gene 3139 protein-coding unique_peak2_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-5 chr7 44401143 44401826 + 0.357340306497258 NA Intergenic Intergenic 17358 NM_016663 20981 Mm.4824 NM_016663 ENSMUSG00000030731 Syt3 AI385753|sytIII synaptotagmin III protein-coding common_peak1_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-9 chrX 166169734 166170221 + 0.357340306497258 NA promoter-TSS (NM_146238) promoter-TSS (NM_146238) -477 NM_146238 237221 Mm.209490 NM_146238 ENSMUSG00000040621 Gemin8 B130034M20Rik|B930082C09Rik|BC023488|gemin-8 gem (nuclear organelle) associated protein 8 protein-coding common_peak1_17_98_-0.124671258206942_6.56702099097614_0.357340306497258 chr1 138296259 138296689 + 0.357340306497258 NA Intergenic Intergenic 22736 NM_177397 338375 Mm.114424 NM_177397 ENSMUSG00000026394 Atp6v1g3 - ATPase, H+ transporting, lysosomal V1 subunit G3 protein-coding common_peak1_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-6 chr3 131271502 131272040 + 0.357340306497258 NA intron (NM_008212, intron 1 of 7) CpG 330 NM_008212 15107 Mm.260164 NM_008212 ENSMUSG00000027984 Hadh AA409008|AU019341|AW742602|HCDH|Hadhsc|Schad hydroxyacyl-Coenzyme A dehydrogenase protein-coding unique_peak2_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-2 chr15 100844853 100845546 + 0.357340306497258 NA Intergenic Intergenic -25446 NM_001077499 20273 Mm.385012 NM_011323 ENSMUSG00000023033 Scn8a AI853486|C630029C19Rik|NaCh6|Nav1.6|dmu|med|mnd-2|mnd2|nmf2|nmf335|nmf58|nur14|seal sodium channel, voltage-gated, type VIII, alpha protein-coding common_peak2_17_98_-0.124671258206942_6.56702099097614_0.357340306497258 chr11 5296878 5297470 + 0.357340306497258 NA intron (NM_001080924, intron 2 of 8) intron (NM_001080924, intron 2 of 8) -35564 NM_032396 84035 Mm.209989 NM_032396 ENSMUSG00000020393 Kremen1 AV002070|Kremen|Krm1 kringle containing transmembrane protein 1 protein-coding unique_peak2_17_98_-0.124671258206942_6.56702099097614_0.357340306497258 chr14 103048770 103049417 + 0.357340306497258 NA intron (NM_008392, intron 1 of 4) intron (NM_008392, intron 1 of 4) 2081 NM_008392 16365 Mm.4662 NM_008392 ENSMUSG00000022126 Acod1 AI323667|CAD|Irg1 aconitate decarboxylase 1 protein-coding common_peak1_17_98_-0.124671258206942_6.56702099097614_0.357340306497258-7 chr6 49367737 49368192 + 0.357340306497258 NA exon (NM_001172216, exon 1 of 6) exon (NM_001172216, exon 1 of 6) 225 NM_172727 231946 Mm.35199 NM_172727 ENSMUSG00000047115 Fam221a D330028D13Rik family with sequence similarity 221, member A protein-coding unique_peak2_33_188_0.0679061479394543_7.5961954981908_0.357292052018165 chrX 169986131 169987468 + 0.357292052018165 NA intron (NM_001290504, intron 8 of 9) intron (NM_001290504, intron 8 of 9) -7882 NR_029457 654820 Mm.34441 NM_001039559 ENSMUSG00000072844 G530011O06Rik - RIKEN cDNA G530011O06 gene ncRNA common_peak2_33_188_0.0679061479394543_7.5961954981908_0.357292052018165 chr2 59881938 59882879 + 0.357292052018165 NA 5' UTR (NM_001159636, exon 1 of 11) 5' UTR (NM_001159636, exon 1 of 11) 198 NM_001159636 72137 Mm.288734 NM_028118 ENSMUSG00000026988 Wdsub1 1700048E19Rik|2610014F08Rik WD repeat, SAM and U-box domain containing 1 protein-coding common_peak1_43_284_-0.0684080551717976_8.12061408146621_0.357273935874481 chr1 182489272 182490010 + 0.357273935874481 NA intron (NM_009794, intron 6 of 20) intron (NM_009794, intron 6 of 20) 27842 NM_009794 12334 Mm.19306 NM_009794 ENSMUSG00000026509 Capn2 AI326419|Capa-2|Capa2|m-calpain|m-calpin calpain 2 protein-coding common_peak2_112_843_0.0344203094652151_9.73830934343979_0.357130961650852 chr3 63963160 63965324 + 0.357130961650852 NA 5' UTR (NM_001272035, exon 1 of 7) 5' UTR (NM_001272035, exon 1 of 7) 491 NM_001272035 11416 Mm.135619 NM_015728 ENSMUSG00000027822 Slc33a1 AI315656|AI788741|Acatn|D630022N01Rik solute carrier family 33 (acetyl-CoA transporter), member 1 protein-coding common_peak1_169_1399_0.0270430472065186_10.4647326354356_0.357066366909258 chr18 35941595 35943132 + 0.357066366909258 NA Intergenic Intergenic -22467 NM_028707 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding common_peak1_93_709_-0.0419318157796695_9.45070930650221_0.357064709007063 chr12 31633995 31635234 + 0.357064709007063 NA promoter-TSS (NM_001164090) promoter-TSS (NM_001164090) -17 NM_007530 12033 Mm.242379 NM_007530 ENSMUSG00000020650 Bcap29 AW208404|Bap29 B cell receptor associated protein 29 protein-coding common_peak1_56_387_-0.0554141226369538_8.57220578086865_0.357034293847312 chr6 40887976 40889208 + 0.357034293847312 NA intron (NR_035473, intron 2 of 3) intron (NR_035473, intron 2 of 3) -1098 NM_139296 194357 Mm.207087 NM_139296 ENSMUSG00000029885 Moxd2 Dbhl1 monooxygenase, DBH-like 2 protein-coding common_peak2_344_3441_-0.018330474915091_11.7398661445827_0.357031478141456 chr15 58887274 58890932 + 0.357031478141456 NA promoter-TSS (NM_175226) promoter-TSS (NM_175226) -126 NM_175226 75841 Mm.4537 NM_175226 ENSMUSG00000037075 Rnf139 4930555P18Rik ring finger protein 139 protein-coding common_peak1_70_505_-0.0498340288472932_8.95807656027066_0.35695765610633 chr6 144919214 144920121 + 0.35695765610633 NA Intergenic Intergenic 129145 NM_001024468 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding common_peak1_13_73_-0.14950092679738_6.13470290223026_0.356884963416664 chr15 80151227 80151590 + 0.356884963416664 NA intron (NM_025609, intron 5 of 10) B1_Mus1|SINE|Alu 18254 NM_025609 66513 Mm.288245 NM_025609 ENSMUSG00000022414 Tab1 2310012M03Rik|Map3k7ip1|b2b449Clo TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding unique_peak2_13_73_-0.14950092679738_6.13470290223026_0.356884963416664-2 chr11 57687850 57688544 + 0.356884963416664 NA intron (NM_134189, intron 1 of 11) intron (NM_134189, intron 1 of 11) 42755 NM_134189 171212 Mm.271670 NM_134189 ENSMUSG00000020520 Galnt10 AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 protein-coding unique_peak2_13_73_-0.14950092679738_6.13470290223026_0.356884963416664 chr11 31949009 31949603 + 0.356884963416664 NA Intergenic Intergenic -16327 NM_026262 67592 Mm.78654 NM_026262 ENSMUSG00000020299 4930524B15Rik - RIKEN cDNA 4930524B15 gene protein-coding unique_peak2_13_73_-0.14950092679738_6.13470290223026_0.356884963416664-5 chr5 115844448 115845094 + 0.356884963416664 NA promoter-TSS (NM_007708) promoter-TSS (NM_007708) -885 NM_007708 12704 Mm.8321 NM_007708 ENSMUSG00000029516 Cit C030025P15Rik|CRIK|CRIK-SK|Cit-k citron protein-coding common_peak1_14_67_0.0945812801610089_6.13475348133084_0.356884963416664 chr11 69041059 69041457 + 0.356884963416664 NA Intergenic Intergenic -4379 NM_011496 20877 Mm.3488 NM_011496 ENSMUSG00000020897 Aurkb AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5 aurora kinase B protein-coding unique_peak2_13_73_-0.14950092679738_6.13470290223026_0.356884963416664-4 chr2 24949135 24949577 + 0.356884963416664 NA promoter-TSS (NM_026021) promoter-TSS (NM_026021) -421 NM_026021 67187 Mm.296106 NM_026021 ENSMUSG00000026974 Zmynd19 2700064H14Rik|AA536891|AU014915|mizip zinc finger, MYND domain containing 19 protein-coding unique_peak2_13_73_-0.14950092679738_6.13470290223026_0.356884963416664-3 chr11 101582135 101582758 + 0.356884963416664 NA TTS (NM_008676) TTS (NM_008676) 204 NM_144830 217203 Mm.280559 NM_144830 ENSMUSG00000034947 Tmem106a 0610008L10Rik|AI043106|BC022145 transmembrane protein 106A protein-coding common_peak1_14_67_0.0945812801610089_6.13475348133084_0.356884963416664-2 chr16 19979796 19980181 + 0.356884963416664 NA intron (NM_183390, intron 1 of 6) intron (NM_183390, intron 1 of 6) 3061 NM_183390 239743 Mm.86699 NM_183390 ENSMUSG00000043008 Klhl6 - kelch-like 6 protein-coding common_peak1_147_1228_-0.0302609267885376_10.2481387369784_0.356858633209797 chr15 83555116 83556358 + 0.356858633209797 NA promoter-TSS (NM_001030014) promoter-TSS (NM_001030014) -26 NM_001030014 223722 Mm.37560 NM_001030014 ENSMUSG00000048755 Mcat AI225907|BC025519 malonyl CoA:ACP acyltransferase (mitochondrial) protein-coding common_peak1_72_490_0.0427398120709359_8.96094912035016_0.356845341895126 chr6 129046431 129047788 + 0.356845341895126 NA intron (NR_024262, intron 1 of 5) intron (NR_024262, intron 1 of 5) 1208 NR_024263 232408 Mm.259262 NM_153094 ENSMUSG00000030154 Klrb1f A630024B12Rik|Nkr-p1f|Nkrp1-f|Nkrp1f killer cell lectin-like receptor subfamily B member 1F protein-coding common_peak2_72_490_0.0427398120709359_8.96094912035016_0.356845341895126 chr15 99369477 99370616 + 0.356845341895126 NA intron (NM_001310623, intron 1 of 24) CpG 436 NM_001310623 22379 Mm.29043 NM_011711 ENSMUSG00000023008 Fmnl3 2700073B04Rik|FBP11|Wbp3|mKIAA2014 formin-like 3 protein-coding common_peak1_157_1330_-0.0295834536122186_10.3635031291058_0.356760412806079 chr7 27227929 27229509 + 0.356760412806079 NA promoter-TSS (NM_181593) promoter-TSS (NM_181593) -122 NM_181593 233011 Mm.30963 NM_181593 ENSMUSG00000003752 Itpkc 9130023N17Rik inositol 1,4,5-trisphosphate 3-kinase C protein-coding common_peak2_45_275_0.056548658501697_8.13679878602902_0.356673374987224 chr9 41950580 41951482 + 0.356673374987224 NA Intergenic Intergenic 173258 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding unique_peak2_23_121_0.0830381305292081_6.97225640282749_0.356629180543539 chr8 105266431 105267479 + 0.356629180543539 NA 5' UTR (NM_015821, exon 2 of 3) 5' UTR (NM_015821, exon 2 of 3) 2307 NM_015821 50788 Mm.334764 NM_015821 ENSMUSG00000033313 Fbxl8 FBL8 F-box and leucine-rich repeat protein 8 protein-coding common_peak1_65_432_0.0457090441205121_8.78107773678698_0.35661645847571 chr11 82990301 82991253 + 0.35661645847571 NA intron (NM_172796, intron 1 of 4) intron (NM_172796, intron 1 of 4) 1053 NM_172796 237886 Mm.270253 NM_172796 ENSMUSG00000069793 Slfn9 9830137M10Rik schlafen 9 protein-coding common_peak1_65_432_0.0457090441205121_8.78107773678698_0.35661645847571-2 chr3 88510376 88511352 + 0.35661645847571 NA Intergenic B1F1|SINE|Alu -7512 NM_001002011 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak1_58_376_0.0471056917731616_8.58197355915524_0.356595568834423 chr14 18271087 18271815 + 0.356595568834423 NA promoter-TSS (NM_025586) promoter-TSS (NM_025586) 315 NM_023526 69721 Mm.25648 NM_023526 ENSMUSG00000021772 Nkiras1 2400004O09Rik|KBRAS1|kappaB-Ras1 NFKB inhibitor interacting Ras-like protein 1 protein-coding common_peak2_39_231_0.0597655436895606_7.88786376697235_0.356584298091972 chr9 20652005 20652837 + 0.356584298091972 NA intron (NM_023371, intron 1 of 3) CpG 291 NM_023371 23988 Mm.7906 NM_023371 ENSMUSG00000032171 Pin1 0610025L01Rik|D9Bwg1161e protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 protein-coding common_peak1_39_231_0.0597655436895606_7.88786376697235_0.356584298091972 chr12 51856083 51856972 + 0.356584298091972 NA Intergenic Intergenic -26991 NM_144788 207304 Mm.249391 NM_144788 ENSMUSG00000035247 Hectd1 A630086P08Rik|AI844876|b2b327Clo|opm HECT domain containing 1 protein-coding common_peak1_480_5058_0.0141520424789743_12.3117125450468_0.356582503027146 chr1 138172590 138176639 + 0.356582503027146 NA intron (NM_001268286, intron 2 of 28) intron (NM_001268286, intron 2 of 28) 512 NM_001111316 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_28_154_0.0725389092383306_7.3123938598934_0.356523024779342 chr13 23710267 23710946 + 0.356523024779342 NA intron (NM_010424, intron 1 of 5) intron (NM_010424, intron 1 of 5) 205 NM_010424 15216 Mm.2681 NM_010424 ENSMUSG00000006611 Hfe MR2 hemochromatosis protein-coding unique_peak2_28_154_0.0725389092383306_7.3123938598934_0.356523024779342 chr7 123239794 123240817 + 0.356523024779342 NA intron (NM_146198, intron 5 of 16) intron (NM_146198, intron 5 of 16) 25439 NM_146198 233836 Mm.211838 NM_146198 ENSMUSG00000030769 Slc5a11 2010013B02Rik|Kst1|RKST2|SMIT2|Slc5a10 solute carrier family 5 (sodium/glucose cotransporter), member 11 protein-coding common_peak1_78_574_-0.045319054718421_9.14475861847253_0.356518869140329 chr14 52022553 52023905 + 0.356518869140329 NA Intergenic Intergenic -2496 NM_027248 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik zinc finger protein 219 protein-coding common_peak1_78_574_-0.045319054718421_9.14475861847253_0.356518869140329-2 chr17 46673749 46674833 + 0.356518869140329 NA promoter-TSS (NM_144857) promoter-TSS (NM_144857) -36 NM_144857 224823 Mm.45101 NM_144857 ENSMUSG00000023971 Rrp36 - ribosomal RNA processing 36 homolog (S. cerevisiae) protein-coding common_peak1_32_201_-0.080891535090915_7.61776571520634_0.356430709759688-2 chr3 154189032 154189663 + 0.356430709759688 NA intron (NM_001081263, intron 2 of 21) intron (NM_001081263, intron 2 of 21) 141213 NM_010713 16875 Mm.15530 NM_010713 ENSMUSG00000096225 Lhx8 L3|Lhx7 LIM homeobox protein 8 protein-coding common_peak1_32_201_-0.080891535090915_7.61776571520634_0.356430709759688 chr12 86079114 86079582 + 0.356430709759688 NA promoter-TSS (NM_009368) promoter-TSS (NM_009368) -307 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak2_80_558_0.039637610149688_9.14652327791804_0.356420911432077 chr2 25053917 25055284 + 0.356420911432077 NA TTS (NM_146251) TTS (NM_146251) 221 NM_001177655 56876 Mm.42956 NM_020276 ENSMUSG00000006476 Nsmf Jacob|Nelf NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding common_peak1_148_1238_-0.0300354700329812_10.2599427371241_0.356403059307787 chr5 38219445 38220997 + 0.356403059307787 NA promoter-TSS (NM_025281) promoter-TSS (NM_025281) 207 NM_029162 75079 Mm.258741 NM_029162 ENSMUSG00000029127 Zbtb49 4930518A03Rik|Zfp509|Znf509 zinc finger and BTB domain containing 49 protein-coding common_peak2_111_876_-0.0366436600540947_9.75811120241768_0.356353093535394 chr1 98129732 98132443 + 0.356353093535394 NA promoter-TSS (NR_040439) promoter-TSS (NR_040439) -380 NR_040439 69030 Mm.402692 NR_040439 ENSMUSG00000100182 1810006J02Rik - RIKEN cDNA 1810006J02 gene ncRNA common_peak1_86_645_-0.0425925240280716_9.31409409267989_0.356342931488865 chr5 124036054 124037450 + 0.356342931488865 NA Intergenic (TCCC)n|Simple_repeat|Simple_repeat -4492 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_234_2155_-0.0229047884481695_11.0626890685284_0.356320080241269 chr3 152395134 152397345 + 0.356320080241269 NA promoter-TSS (NM_001287139) promoter-TSS (NM_001287139) 236 NM_001080755 108946 Mm.379292 NM_198416 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 protein-coding common_peak2_237_2122_0.0217960255206204_11.0627866686657_0.356320080240479 chr18 38296453 38299327 + 0.356320080240479 NA intron (NM_001164621, intron 2 of 9) intron (NM_001164621, intron 2 of 9) 1085 NM_001164621 56736 Mm.228903 NM_020012 ENSMUSG00000060450 Rnf14 2310075C09Rik|2610005D23Rik|AA986456|AU041447|D18Ertd188e|D7Bwg0165e|Triad2 ring finger protein 14 protein-coding unique_peak2_50_339_-0.0617201590102461_8.37853085663258_0.356218298640021 chr11 114897147 114898805 + 0.356218298640021 NA intron (NM_170758, intron 4 of 6) intron (NM_170758, intron 4 of 6) 7935 NM_170758 217303 Mm.294439 NM_170758 ENSMUSG00000034652 Cd300a B230315M08Rik|Clm8|LMIR1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1 CD300A molecule protein-coding common_peak1_612_6820_0.0121515567811485_12.7418433256572_0.356208613277648 chr11 117779115 117783528 + 0.356208613277648 NA promoter-TSS (NM_001195089) promoter-TSS (NM_001195089) -638 NM_145439 217353 Mm.286963 NM_145439 ENSMUSG00000025572 Tmc6 D11Ertd204e|EVER1 transmembrane channel-like gene family 6 protein-coding common_peak2_71_513_-0.0477145649484996_8.98176726671963_0.356071598644248 chr10 80589075 80590399 + 0.356071598644248 NA intron (NM_145421, intron 1 of 4) intron (NM_145421, intron 1 of 4) 604 NM_145421 216169 Mm.29802 NM_145421 ENSMUSG00000003346 Abhd17a 1700013O15Rik|BC005632|D10Bwg1364e|Fam108a abhydrolase domain containing 17A protein-coding common_peak2_353_3466_0.0168011111786299_11.7678726767921_0.3559554399607 chr6 92090629 92095374 + 0.3559554399607 NA intron (NM_011630, intron 1 of 14) intron (NM_011630, intron 1 of 14) 1583 NM_011630 22026 Mm.87062 NM_011630 ENSMUSG00000005893 Nr2c2 TAK1|Tr4|mKIAA4145 nuclear receptor subfamily 2, group C, member 2 protein-coding common_peak1_439_4532_0.0148775060589976_12.1536891989155_0.355936663475462 chr1 171387827 171391086 + 0.355936663475462 NA intron (NM_001005508, intron 1 of 11) intron (NM_001005508, intron 1 of 11) 496 NM_001005508 226652 Mm.251048 NM_001005508 ENSMUSG00000048865 Arhgap30 6030405P05Rik|Gm102|mFLJ00267 Rho GTPase activating protein 30 protein-coding common_peak2_103_801_-0.0388125594412756_9.62805214673428_0.35593594398608 chr10 7725881 7727429 + 0.35593594398608 NA intron (NM_011835, intron 1 of 10) B1_Mur3|SINE|Alu 655 NM_011835 23924 Mm.28127 NM_011835 ENSMUSG00000019794 Katna1 - katanin p60 (ATPase-containing) subunit A1 protein-coding common_peak1_44_291_-0.0636459213153859_8.15800159822232_0.355892299045786 chr12 76254652 76255410 + 0.355892299045786 NA promoter-TSS (NM_138745) promoter-TSS (NM_138745) -201 NM_138745 108156 Mm.29584 NM_138745 ENSMUSG00000021048 Mthfd1 Dcs|E430024A07Rik|Mthfd methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase protein-coding common_peak2_44_291_-0.0636459213153859_8.15800159822232_0.355892299045786 chr5 32103594 32104972 + 0.355892299045786 NA Intergenic Intergenic -32189 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_52_328_0.0537979917078708_8.38884276958918_0.35588828206625 chr19 58143570 58144888 + 0.35588828206625 NA Intergenic Intergenic 93062 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA common_peak1_52_328_0.0537979917078708_8.38884276958918_0.35588828206625 chr5 146781877 146782984 + 0.35588828206625 NA intron (NM_011669, intron 1 of 8) intron (NM_011669, intron 1 of 8) 12526 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak2_57_395_-0.0540809943806853_8.60231612288927_0.355879439421782-2 chr17 26752036 26754268 + 0.355879439421782 NA intron (NM_029870, intron 4 of 8) intron (NM_029870, intron 4 of 8) -27927 NM_172149 224630 Mm.21795 NM_172149 ENSMUSG00000024191 Bnip1 2010005M06Rik|5930429G21Rik|Sec20 BCL2/adenovirus E1B interacting protein 1 protein-coding common_peak2_57_395_-0.0540809943806853_8.60231612288927_0.355879439421782 chr16 96126926 96128409 + 0.355879439421782 NA promoter-TSS (NM_008251) promoter-TSS (NM_008251) 58 NM_008251 15312 Mm.2756 NM_008251 ENSMUSG00000040681 Hmgn1 HMG-14|Hmg14 high mobility group nucleosomal binding domain 1 protein-coding common_peak1_57_395_-0.0540809943806853_8.60231612288927_0.355879439421782 chr17 25832175 25833070 + 0.355879439421782 NA TTS (NM_028101) TTS (NM_028101) 739 NM_019719 56424 Mm.277599 NM_019719 ENSMUSG00000039615 Stub1 0610033N24Rik|2210017D18Rik|2310040B03Rik|AW046544|Chip STIP1 homology and U-Box containing protein 1 protein-coding common_peak1_57_395_-0.0540809943806853_8.60231612288927_0.355879439421782-2 chr2 164913137 164914017 + 0.355879439421782 NA Intergenic Intergenic -1827 NM_199027 329559 Mm.330776 NM_199027 ENSMUSG00000039834 Zfp335 1810045J01Rik|NIF-1|Nif1|Znf335 zinc finger protein 335 protein-coding unique_peak2_27_165_-0.0884746813289992_7.33080209068243_0.355831340428516 chr2 22786271 22787659 + 0.355831340428516 NA intron (NM_019456, intron 1 of 13) Lx8|LINE|L1 12638 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding common_peak2_27_165_-0.0884746813289992_7.33080209068243_0.355831340428516 chr2 157737303 157738014 + 0.355831340428516 NA intron (NM_025680, intron 1 of 15) intron (NM_025680, intron 1 of 15) 257 NM_025680 66642 Mm.45193 NM_025680 ENSMUSG00000027649 Ctnnbl1 5730471K09Rik|NAP|NYD-SP19|P14L catenin, beta like 1 protein-coding common_peak2_142_1130_0.0288071325926076_10.1577867802861_0.355793179826905 chr8 110845693 110847685 + 0.355793179826905 NA promoter-TSS (NM_133973) promoter-TSS (NM_133973) 89 NM_001310607 102339 Mm.272930 NM_133973 ENSMUSG00000031753 Cog4 AW554810|D8Ertd515e component of oligomeric golgi complex 4 protein-coding common_peak1_180_1569_-0.0273415283026281_10.6028780796277_0.355771390168208 chr4 41348127 41349859 + 0.355771390168208 NA promoter-TSS (NM_001290454) promoter-TSS (NM_001290454) -3 NM_001290454 67123 Mm.289795 NM_023305 ENSMUSG00000028437 Ubap1 2700092A01Rik|NAG20|UBAP-1|Ubap ubiquitin-associated protein 1 protein-coding common_peak2_22_131_-0.105933315264943_6.99142746172598_0.355753310801944 chr8 72109320 72110137 + 0.355753310801944 NA exon (NM_146338, exon 2 of 2) exon (NM_146338, exon 2 of 2) 2688 NM_146338 258335 Mm.377439 NM_146338 ENSMUSG00000046881 Olfr374 MOR130-1 olfactory receptor 374 protein-coding common_peak1_22_131_-0.105933315264943_6.99142746172598_0.355753310801944 chr4 11771661 11772196 + 0.355753310801944 NA intron (NM_019753, intron 3 of 17) ORR1E|LTR|ERVL-MaLR 13771 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding unique_peak2_22_131_-0.105933315264943_6.99142746172598_0.355753310801944 chr9 56412466 56413590 + 0.355753310801944 NA intron (NM_172924, intron 1 of 6) MTC|LTR|ERVL-MaLR 5022 NM_172924 244895 Mm.490331 NM_172924 ENSMUSG00000074305 Peak1 1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002 pseudopodium-enriched atypical kinase 1 protein-coding common_peak1_22_131_-0.105933315264943_6.99142746172598_0.355753310801944-3 chrX 9662307 9662908 + 0.355753310801944 NA intron (NM_025975, intron 1 of 4) intron (NM_025975, intron 1 of 4) 376 NM_025975 67117 Mm.29150 NM_025975 ENSMUSG00000031176 Dynlt3 2310075M16Rik|AU042796|Tcte1l dynein light chain Tctex-type 3 protein-coding common_peak1_22_131_-0.105933315264943_6.99142746172598_0.355753310801944-2 chr5 124474767 124475391 + 0.355753310801944 NA intron (NM_030259, intron 1 of 3) B1_Mus1|SINE|Alu 3156 NM_030259 80291 Mm.425280 NM_030259 ENSMUSG00000029401 Rilpl2 - Rab interacting lysosomal protein-like 2 protein-coding common_peak2_121_972_-0.0351642325477837_9.90871387850722_0.355713429464177 chr7 78846213 78848187 + 0.355713429464177 NA promoter-TSS (NM_029585) promoter-TSS (NM_029585) 11 NM_029585 76375 Mm.250541 NM_029585 ENSMUSG00000030610 Det1 2610034H20Rik de-etiolated homolog 1 (Arabidopsis) protein-coding common_peak1_437_4602_-0.015292873498618_12.1607122904746_0.355672802014567 chr5 64809242 64813463 + 0.355672802014567 NA intron (NM_008453, intron 1 of 5) intron (NM_008453, intron 1 of 5) 7829 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak1_315_3013_0.0178600118882049_11.5663937075419_0.355487247050343 chr12 84192224 84195058 + 0.355487247050343 NA 5' UTR (NM_001163502, exon 1 of 13) 5' UTR (NM_001163502, exon 1 of 13) 374 NM_001163502 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_173_1441_0.0255546926113865_10.5066327955465_0.355448218963701 chr14 103069111 103071126 + 0.355448218963701 NA promoter-TSS (NM_001033242) promoter-TSS (NM_001033242) -98 NM_001033242 211286 Mm.295289 NM_001033242 ENSMUSG00000022125 Cln5 A730075N08Rik ceroid-lipofuscinosis, neuronal 5 protein-coding common_peak1_34_195_0.0667358704083254_7.64807777931937_0.355322462192324 chr2 52318744 52319311 + 0.355322462192324 NA intron (NM_010889, intron 10 of 156) intron (NM_010889, intron 10 of 156) 19771 NM_010889 17996 Mm.389247 NM_010889 ENSMUSG00000026950 Neb AI595938 nebulin protein-coding unique_peak2_34_195_0.0667358704083254_7.64807777931937_0.355322462192324 chr18 4302229 4303406 + 0.355322462192324 NA Intergenic Intergenic 50136 NM_007746 26410 Mm.3275 NM_007746 ENSMUSG00000024235 Map3k8 Cot|Cot/Tpl2|Est|Estf|Tpl-2|Tpl2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding common_peak1_122_981_-0.0340014330959821_9.9225784977667_0.355206035545249 chr6 86599552 86601644 + 0.355206035545249 NA Intergenic Intergenic -27576 NM_026414 67855 Mm.183043 NM_026414 ENSMUSG00000033508 Asprv1 2300003P22Rik|AA986851|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding common_peak2_122_981_-0.0340014330959821_9.9225784977667_0.355206035545249 chr3 90603228 90606126 + 0.355206035545249 NA intron (NM_011311, intron 1 of 2) intron (NM_011311, intron 1 of 2) 907 NM_011311 20198 Mm.3925 NM_011311 ENSMUSG00000001020 S100a4 18A2|42a|Capl|FSp1|Mts1|PeL98|metastasin|pk9a S100 calcium binding protein A4 protein-coding common_peak1_46_283_0.0533839679213362_8.17643910346535_0.355132849311458 chr2 125672947 125673873 + 0.355132849311458 NA exon (NM_025613, exon 1 of 1) exon (NM_025613, exon 1 of 1) 310 NM_025613 58521 Mm.425101 NM_025613 ENSMUSG00000091337 Eid1 2610002K20Rik|Cri1|EID-1|ORF12|PNAS-22|PTD014 EP300 interacting inhibitor of differentiation 1 protein-coding common_peak1_46_283_0.0533839679213362_8.17643910346535_0.355132849311458-2 chr4 132532878 132533810 + 0.355132849311458 NA exon (NM_007512, exon 3 of 4) exon (NM_007512, exon 3 of 4) 2070 NM_007512 11983 Mm.2171 NM_007512 ENSMUSG00000054428 Atpif1 Atpi|IF(1)|If1 ATPase inhibitory factor 1 protein-coding common_peak2_46_283_0.0533839679213362_8.17643910346535_0.355132849311458 chr11 54957915 54959398 + 0.355132849311458 NA intron (NM_001199275, intron 1 of 18) intron (NM_001199275, intron 1 of 18) 4284 NM_021327 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak2_134_1052_0.0300234326921984_10.0553014373718_0.355037108584412 chr6 124916736 124918740 + 0.355037108584412 NA 5' UTR (NM_026988, exon 1 of 5) 5' UTR (NM_026988, exon 1 of 5) 208 NM_026988 69202 Mm.142187 NM_026988 ENSMUSG00000030122 Ptms 2610009E16Rik parathymosin protein-coding unique_peak2_40_238_0.060576457084677_7.93115503652309_0.354986978784144 chr12 76374808 76376599 + 0.354986978784144 NA intron (NM_178744, intron 1 of 1) intron (NM_178744, intron 1 of 1) 5437 NM_178744 268564 Mm.77065 NM_178744 ENSMUSG00000033454 Zbtb1 9430077A12|AI256369|Bsg2|C430003J21Rik zinc finger and BTB domain containing 1 protein-coding common_peak1_51_347_-0.0609099400214408_8.41248852583801_0.354921497724306 chr12 76305091 76306032 + 0.354921497724306 NA intron (NM_138745, intron 21 of 27) Charlie1a|DNA|hAT-Charlie -19330 NM_001101471 238276 Mm.311452 NM_001101471 ENSMUSG00000021057 Akap5 3526401B18Rik|AKAP 150|AKAP-5|AKAP150|BB098886|Gm258|P150 A kinase (PRKA) anchor protein 5 protein-coding common_peak2_90_645_0.0369546880261229_9.35386769870698_0.35482045963463 chr17 47753267 47755348 + 0.35482045963463 NA intron (NM_001161723, intron 1 of 8) (G)n|Simple_repeat|Simple_repeat 16376 NM_001161723 21425 Mm.2305 NM_011549 ENSMUSG00000023990 Tfeb Tcfeb|bHLHe35 transcription factor EB protein-coding common_peak2_80_592_-0.0455462115531251_9.18911518876944_0.354807007088899 chr10 127661418 127663468 + 0.354807007088899 NA intron (NM_001122895, intron 5 of 5) intron (NM_001122895, intron 5 of 5) 4260 NM_001122895 17937 Mm.336898 NM_008668 ENSMUSG00000025402 Nab2 AI451907 Ngfi-A binding protein 2 protein-coding common_peak1_105_819_-0.0371260228759773_9.66091708806746_0.354714240669972 chr2 167014667 167016173 + 0.354714240669972 NA exon (NM_153065, exon 1 of 21) exon (NM_153065, exon 1 of 21) 107 NM_153065 228889 Mm.295031 NM_153065 ENSMUSG00000017999 Ddx27 C86129 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 protein-coding common_peak1_33_208_-0.0772105599203554_7.66875385212071_0.354519946937066 chr6 95718182 95718820 + 0.354519946937066 NA intron (NM_011507, intron 1 of 10) CpG 345 NM_011507 20917 Mm.371585 NM_011507 ENSMUSG00000061838 Suclg2 AF171077|AW556404|D6Wsu120e|G-SCS|GTPSCS|SCS-betaG succinate-Coenzyme A ligase, GDP-forming, beta subunit protein-coding unique_peak2_33_208_-0.0772105599203554_7.66875385212071_0.354519946937066 chr3 54708454 54709722 + 0.354519946937066 NA exon (NM_019995, exon 11 of 20) exon (NM_019995, exon 11 of 20) 15983 NM_019995 56790 Mm.486375 NM_019995 ENSMUSG00000027751 Supt20 AA667204|AI450544|D3Ertd300e|Fam48a|Supt20h|p38IP suppressor of Ty 20 protein-coding unique_peak2_19_96_0.0912213854436486_6.64552353490895_0.354509443695952-5 chr8 84011504 84012302 + 0.354509443695952 NA promoter-TSS (NR_035431) promoter-TSS (NR_035431) -183 NM_001291292 70134 Mm.41017 NM_001291292 ENSMUSG00000074217 2210011C24Rik - RIKEN cDNA 2210011C24 gene protein-coding common_peak1_19_96_0.0912213854436486_6.64552353490895_0.354509443695952 chr1 95661544 95661995 + 0.354509443695952 NA intron (NM_001159745, intron 1 of 3) intron (NM_001159745, intron 1 of 3) 5825 NM_009183 20452 Mm.306228 NM_009183 ENSMUSG00000040710 St8sia4 PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding common_peak1_19_96_0.0912213854436486_6.64552353490895_0.354509443695952-5 chr3 121330429 121330874 + 0.354509443695952 NA intron (NM_024178, intron 3 of 3) intron (NM_024178, intron 3 of 3) 38834 NM_024178 66789 Mm.269881 NM_024178 ENSMUSG00000039887 Alg14 5430428G01Rik|AI854024 asparagine-linked glycosylation 14 protein-coding common_peak1_19_96_0.0912213854436486_6.64552353490895_0.354509443695952-6 chr4 141868020 141868507 + 0.354509443695952 NA intron (NM_025994, intron 1 of 3) intron (NM_025994, intron 1 of 3) 6657 NM_025994 27984 Mm.395598 NM_025994 ENSMUSG00000040659 Efhd2 2600015J22Rik|AA408606|D4Wsu27e EF hand domain containing 2 protein-coding unique_peak2_19_96_0.0912213854436486_6.64552353490895_0.354509443695952 chr10 22296145 22297022 + 0.354509443695952 NA intron (NM_009018, intron 5 of 5) intron (NM_009018, intron 5 of 5) -10137 NR_015465 606736 Mm.387042 NR_015465 ENSMUSG00000097352 C920009B18Rik - RIKEN cDNA C920009B18 gene ncRNA common_peak1_19_96_0.0912213854436486_6.64552353490895_0.354509443695952-3 chr11 98491950 98492449 + 0.354509443695952 NA intron (NM_011771, intron 3 of 7) intron (NM_011771, intron 3 of 7) 45365 NM_010346 14786 Mm.276702 NM_010346 ENSMUSG00000019312 Grb7 mKIAA4028 growth factor receptor bound protein 7 protein-coding unique_peak2_19_96_0.0912213854436486_6.64552353490895_0.354509443695952-2 chr15 8279113 8279982 + 0.354509443695952 NA Intergenic Intergenic 110441 NM_001162906 73692 Mm.164436 NM_001162906 ENSMUSG00000039801 2410089E03Rik 4732468D17Rik|Hug|Jbts17|b2b012Clo RIKEN cDNA 2410089E03 gene protein-coding common_peak1_19_96_0.0912213854436486_6.64552353490895_0.354509443695952-4 chr16 52033832 52034284 + 0.354509443695952 NA intron (NM_001033238, intron 2 of 17) intron (NM_001033238, intron 2 of 17) 2509 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_19_96_0.0912213854436486_6.64552353490895_0.354509443695952-7 chr7 58750457 58750890 + 0.354509443695952 NA intron (NM_009728, intron 2 of 20) intron (NM_009728, intron 2 of 20) 92471 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding unique_peak2_19_96_0.0912213854436486_6.64552353490895_0.354509443695952-4 chr7 45367155 45367621 + 0.354509443695952 NA promoter-TSS (NM_029741) promoter-TSS (NM_029741) 155 NR_027802 50994 Mm.389897 NM_016664 ENSMUSG00000091510 Mtag2 MAG metastasis associated gene 2 ncRNA common_peak1_19_96_0.0912213854436486_6.64552353490895_0.354509443695952-2 chr10 98897690 98898227 + 0.354509443695952 NA Intergenic Intergenic -17194 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding unique_peak2_19_96_0.0912213854436486_6.64552353490895_0.354509443695952-3 chr6 98606837 98607516 + 0.354509443695952 NA Intergenic Intergenic -264422 NM_001128092 330390 Mm.484161 NM_001128092 ENSMUSG00000090667 Gm765 - predicted gene 765 protein-coding common_peak2_45_299_-0.0637455752160161_8.19694590288787_0.354394139816279 chr9 103201416 103202202 + 0.354394139816279 NA intron (NM_009275, intron 1 of 6) CpG 256 NM_009275 20818 Mm.273053 NM_009275 ENSMUSG00000032553 Srprb AA409543 signal recognition particle receptor, B subunit protein-coding common_peak2_45_299_-0.0637455752160161_8.19694590288787_0.354394139816279-2 chrX 53369538 53370720 + 0.354394139816279 NA intron (NM_001290514, intron 1 of 5) intron (NM_001290514, intron 1 of 5) 430 NM_027409 70380 Mm.491083 NM_027409 ENSMUSG00000023074 Mospd1 1810018L05Rik motile sperm domain containing 1 protein-coding common_peak1_60_392_0.0461339487883663_8.64145247665279_0.354367141998693 chr3 138442508 138443555 + 0.354367141998693 NA promoter-TSS (NM_007410) promoter-TSS (NM_007410) -62 NM_007410 11532 Mm.3874 NM_007410 ENSMUSG00000028138 Adh5 Adh-5|Adh3|GSNOR alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding common_peak2_97_745_-0.0395432721581965_9.52326018417614_0.354321860929502 chr3 84678157 84680262 + 0.354321860929502 NA intron (NM_177260, intron 1 of 6) intron (NM_177260, intron 1 of 6) 13017 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding common_peak1_198_1702_0.0231190741688749_10.745422256763_0.354226325882759 chr14 31250503 31252151 + 0.354226325882759 NA promoter-TSS (NM_027949) promoter-TSS (NM_027949) -109 NM_027949 71838 Mm.5348 NM_027949 ENSMUSG00000021902 Phf7 1700006H01Rik|1700010P14Rik|AI427892|AW555949 PHD finger protein 7 protein-coding common_peak2_143_1188_-0.0310107043139212_10.2000276475887_0.354209834713866 chr15 83601292 83604357 + 0.354209834713866 NA 3' UTR (NM_022723, exon 22 of 22) 3' UTR (NM_022723, exon 22 of 22) -7667 NM_183017 223723 Mm.46778 NM_183017 ENSMUSG00000016757 Ttll12 BC055368|D430005B17 tubulin tyrosine ligase-like family, member 12 protein-coding common_peak2_75_515_0.0423615703463494_9.03240804059643_0.354177090968308 chr19 14586986 14589549 + 0.354177090968308 NA intron (NM_001302947, intron 4 of 19) intron (NM_001302947, intron 4 of 19) 8946 NM_001302951 21888 Mm.103638 NM_011600 ENSMUSG00000024642 Tle4 5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4 transducin-like enhancer of split 4 protein-coding common_peak1_75_515_0.0423615703463494_9.03240804059643_0.354177090968308-2 chr5 105731736 105732885 + 0.354177090968308 NA 5' UTR (NM_001122768, exon 2 of 3) 5' UTR (NM_001122768, exon 2 of 3) 31500 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak1_75_515_0.0423615703463494_9.03240804059643_0.354177090968308 chr17 6947904 6949113 + 0.354177090968308 NA promoter-TSS (NM_001083945) promoter-TSS (NM_001083945) -152 NM_001083945 100037282 Mm.29830 NM_001083945 ENSMUSG00000023806 Rsph3b Rshl2b radial spoke 3B homolog (Chlamydomonas) protein-coding common_peak1_29_161_0.0688064297130788_7.37425321774116_0.354175296113345-2 chrX 77518032 77518728 + 0.354175296113345 NA intron (NM_020601, intron 1 of 15) intron (NM_020601, intron 1 of 15) 7153 NM_020601 21372 Mm.258476 NM_020601 ENSMUSG00000025246 Tbl1x 5330429M20|Tbl1 transducin (beta)-like 1 X-linked protein-coding common_peak1_29_161_0.0688064297130788_7.37425321774116_0.354175296113345 chr7 4331701 4332323 + 0.354175296113345 NA Intergenic L1_Mus1|LINE|L1 -5712 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak1_39_253_-0.0709381479550331_7.95321561279465_0.354114801964459 chr4 33110703 33111603 + 0.354114801964459 NA Intergenic Intergenic -21403 NM_008075 14408 Mm.14116 NM_008075 ENSMUSG00000028280 Gabrr1 GABA-C gamma-aminobutyric acid (GABA) C receptor, subunit rho 1 protein-coding common_peak1_81_600_-0.0431656044594035_9.20963837848148_0.354079626003261 chr1 86441658 86443082 + 0.354079626003261 NA Intergenic CpG 16041 NM_027966 71863 Mm.179627 NM_027966 ENSMUSG00000036574 1700019O17Rik - RIKEN cDNA 1700019O17 gene protein-coding common_peak1_18_104_-0.113881314269232_6.65730486053151_0.353977093504883 chr12 25439168 25439590 + 0.353977093504883 NA Intergenic Intergenic 310205 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_18_104_-0.113881314269232_6.65730486053151_0.353977093504883-4 chr6 31221132 31221704 + 0.353977093504883 NA intron (NR_040260, intron 1 of 5) (TTA)n|Simple_repeat|Simple_repeat 1067 NR_040261 73652 Mm.441297 NR_040257 ENSMUSG00000087380 2210408F21Rik - RIKEN cDNA 2210408F21 gene ncRNA unique_peak2_18_104_-0.113881314269232_6.65730486053151_0.353977093504883 chr10 127059485 127060280 + 0.353977093504883 NA 5' UTR (NM_001033262, exon 1 of 4) 5' UTR (NM_001033262, exon 1 of 4) 302 NM_001033262 216438 Mm.37892 NM_001033262 ENSMUSG00000040502 March9 AI608492|BC019560 membrane-associated ring finger (C3HC4) 9 protein-coding common_peak1_18_104_-0.113881314269232_6.65730486053151_0.353977093504883-3 chr19 41341371 41341831 + 0.353977093504883 NA intron (NM_031376, intron 2 of 16) B3A|SINE|B2 43469 NM_031376 83490 Mm.222266 NM_031376 ENSMUSG00000025017 Pik3ap1 1810044J04Rik|BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding unique_peak2_18_104_-0.113881314269232_6.65730486053151_0.353977093504883-2 chr4 145305091 145305881 + 0.353977093504883 NA intron (NM_009401, intron 1 of 12) MTD|LTR|ERVL-MaLR 9661 NM_009401 21941 Mm.12810 NM_009401 ENSMUSG00000028602 Tnfrsf8 Cd30|D1S166E|Ki|Ki-1 tumor necrosis factor receptor superfamily, member 8 protein-coding common_peak1_18_104_-0.113881314269232_6.65730486053151_0.353977093504883-2 chr13 69611006 69611460 + 0.353977093504883 NA promoter-TSS (NM_145354) promoter-TSS (NM_145354) 230 NM_175283 78925 Mm.451912 NM_175283 ENSMUSG00000021594 Srd5a1 0610031P22Rik|4930435F02Rik|S5AR 1|Srd5a-1 steroid 5 alpha-reductase 1 protein-coding common_peak2_66_470_-0.0490395494630604_8.85506347488125_0.353851910014859-2 chr2 28192088 28193869 + 0.353851910014859 NA promoter-TSS (NM_001038614) promoter-TSS (NM_001038614) -115 NM_001038613 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding common_peak2_66_470_-0.0490395494630604_8.85506347488125_0.353851910014859 chr11 51882915 51884808 + 0.353851910014859 NA Intergenic Intergenic -26380 NM_199299 76901 Mm.259996 NM_199299 ENSMUSG00000020387 Jade2 1200017K05Rik|AI480685|Phf15|mKIAA0239 jade family PHD finger 2 protein-coding common_peak1_52_354_-0.0559334489489327_8.44370848991758_0.353835785572499 chr10 5805479 5806237 + 0.353835785572499 NA promoter-TSS (NM_025995) promoter-TSS (NM_025995) -393 NM_025995 67141 Mm.197520 NM_025995 ENSMUSG00000019773 Fbxo5 2510044I10Rik|C85305|Emi1|Fbxo31 F-box protein 5 protein-coding common_peak2_100_734_0.0352477538817304_9.53922431666459_0.353748413381015 chr1 36243197 36244948 + 0.353748413381015 NA exon (NM_198899, exon 1 of 41) exon (NM_198899, exon 1 of 41) 230 NM_198899 320011 Mm.261022 NM_198899 ENSMUSG00000037470 Uggt1 0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding common_peak1_24_128_0.0747879367131299_7.04862122377982_0.353679810596352-3 chr17 78352257 78352884 + 0.353679810596352 NA intron (NM_015800, intron 12 of 16) B1_Mur3|SINE|Alu 65582 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_24_128_0.0747879367131299_7.04862122377982_0.353679810596352-2 chr16 64941638 64942125 + 0.353679810596352 NA intron (NM_008310, intron 2 of 2) RLTR14|LTR|ERV1 89796 NM_178647 106143 Mm.10160 NM_178647 ENSMUSG00000054604 Cggbp1 AA960172|AL023996|AW045841 CGG triplet repeat binding protein 1 protein-coding common_peak1_24_128_0.0747879367131299_7.04862122377982_0.353679810596352 chr11 55033761 55034178 + 0.353679810596352 NA promoter-TSS (NM_001110211) promoter-TSS (NM_001110211) -498 NM_013472 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak1_24_128_0.0747879367131299_7.04862122377982_0.353679810596352-4 chr9 21411924 21412452 + 0.353679810596352 NA promoter-TSS (NR_045742) promoter-TSS (NR_045742) 351 NM_021888 60507 Mm.436579 NM_021888 ENSMUSG00000002825 Qtrt1 2610028E17Rik|Tgt queuine tRNA-ribosyltransferase 1 protein-coding common_peak2_321_3162_-0.018468615972056_11.6178435325314_0.353581001729094 chr1 39899992 39903685 + 0.353581001729094 NA intron (NM_001252200, intron 2 of 31) intron (NM_001252200, intron 2 of 31) 925 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding common_peak1_137_1082_0.0283901038248242_10.0950125795207_0.353555376561528 chrX 77510169 77512085 + 0.353555376561528 NA promoter-TSS (NM_020601) promoter-TSS (NM_020601) -100 NM_020601 21372 Mm.258476 NM_020601 ENSMUSG00000025246 Tbl1x 5330429M20|Tbl1 transducin (beta)-like 1 X-linked protein-coding common_peak2_189_1607_0.0240304102826396_10.6630668963202_0.353542504433076 chr5 9160628 9162482 + 0.353542504433076 NA intron (NM_011806, intron 1 of 17) CpG 221 NM_001110327 23857 Mm.22480 NM_011806 ENSMUSG00000042508 Dmtf1 Dimp|Dmp1 cyclin D binding myb-like transcription factor 1 protein-coding common_peak2_28_172_-0.0859649131241564_7.39164577107465_0.353540571698084 chr15 6574038 6575164 + 0.353540571698084 NA Intergenic Intergenic -5246 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_28_172_-0.0859649131241564_7.39164577107465_0.353540571698084 chr19 16773100 16773712 + 0.353540571698084 NA intron (NM_173028, intron 1 of 71) intron (NM_173028, intron 1 of 71) 7527 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding common_peak1_135_1108_-0.0316704556284684_10.0992084223475_0.353411662993307 chr1 172375762 172377405 + 0.353411662993307 NA promoter-TSS (NM_026234) promoter-TSS (NM_026234) 52 NM_026234 67556 Mm.26612 NM_026234 ENSMUSG00000050229 Pigm 4933437L05Rik|AI644422|AV302080|C920011G20Rik phosphatidylinositol glycan anchor biosynthesis, class M protein-coding common_peak2_54_344_0.0508384667203838_8.45587178502572_0.353383758146254 chr9 95279219 95280652 + 0.353383758146254 NA Intergenic Intergenic 127335 NM_018763 54371 Mm.212446 NM_018763 ENSMUSG00000033350 Chst2 AI428561|AW121776|C130041E03Rik|Chts2|GST-2|GlcNAc6ST|Gn6st carbohydrate sulfotransferase 2 protein-coding common_peak2_92_663_0.0357772895406647_9.39292807611726_0.353379556293744 chr6 125876668 125877323 + 0.353379556293744 NA intron (NM_153589, intron 13 of 25) (CATTC)n|Simple_repeat|Simple_repeat 186576 NM_153589 243634 Mm.333398 NM_153589 ENSMUSG00000038115 Ano2 BC033409|Tmem16b anoctamin 2 protein-coding common_peak1_74_539_-0.0466658887611651_9.05348265267025_0.353376320380623 chr11 101424975 101425646 + 0.353376320380623 NA promoter-TSS (NM_026865) promoter-TSS (NM_026865) 23 NM_026865 73635 Mm.472804 NM_026865 ENSMUSG00000097487 Ptges3l 1110069E20Rik|1700113I22Rik prostaglandin E synthase 3 (cytosolic)-like protein-coding common_peak1_23_137_-0.0947489886860744_7.06114996243513_0.353283827450026-3 chr17 29167393 29167946 + 0.353283827450026 NA intron (NM_153166, intron 13 of 20) intron (NM_153166, intron 13 of 20) 32613 NM_001002786 442827 Mm.440341 NM_001002786 ENSMUSG00000064147 Rab44 9830134C10Rik RAB44, member RAS oncogene family protein-coding common_peak1_23_137_-0.0947489886860744_7.06114996243513_0.353283827450026-2 chr14 57797583 57798018 + 0.353283827450026 NA promoter-TSS (NM_009119) promoter-TSS (NM_009119) -389 NM_009119 20220 Mm.30173 NM_009119 ENSMUSG00000021963 Sap18 C530046K05Rik|D11Ertd539e|EMegR4|Sap18a|Sinbp1 Sin3-associated polypeptide 18 protein-coding common_peak1_23_137_-0.0947489886860744_7.06114996243513_0.353283827450026 chr1 86210641 86211246 + 0.353283827450026 NA intron (NM_001310702, intron 18 of 24) MTEa|LTR|ERVL-MaLR 56163 NM_001310702 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding common_peak1_23_137_-0.0947489886860744_7.06114996243513_0.353283827450026-4 chr5 140613397 140613916 + 0.353283827450026 NA intron (NM_008494, intron 6 of 7) PB1D10|SINE|Alu 6315 NM_008494 16848 Mm.12834 NM_008494 ENSMUSG00000029570 Lfng AW061165 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_413_4205_0.0151090128546532_12.0457876411591_0.353037711684057 chr8 122431180 122434009 + 0.353037711684057 NA intron (NM_001301284, intron 1 of 4) intron (NM_001301284, intron 1 of 4) 346 NM_001301284 13057 Mm.271671 NM_007806 ENSMUSG00000006519 Cyba b558|nmf333|p22-phox|p22phox cytochrome b-245, alpha polypeptide protein-coding common_peak2_129_1005_0.029112241713726_9.98897071066239_0.352753085224059 chr15 89209967 89212468 + 0.352753085224059 NA promoter-TSS (NM_027805) promoter-TSS (NM_027805) -342 NM_026813 71474 Mm.184055 NM_026813 ENSMUSG00000036561 Ppp6r2 1110033O10Rik|8430411H09Rik|B230107H12Rik|Pp6r2|Saps2 protein phosphatase 6, regulatory subunit 2 protein-coding common_peak1_11_50_0.114737814934244_5.72979424943862_0.352751277022878 chr10 96206327 96206710 + 0.352751277022878 NA Intergenic (CATAG)n|Simple_repeat|Simple_repeat -19689 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_11_50_0.114737814934244_5.72979424943862_0.352751277022878-2 chr19 4257241 4257544 + 0.352751277022878 NA Intergenic Intergenic 6486 NR_105951 102465595 NR_105951 ENSMUSG00000099290 Mir6985 Gm27719|mmu-mir-6985 microRNA 6985 ncRNA common_peak2_34_215_-0.0734417876399345_7.7181666083435_0.352736605702662 chr1 87856221 87857571 + 0.352736605702662 NA intron (NM_177646, intron 1 of 29) PB1D11|SINE|Alu 3609 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak1_34_215_-0.0734417876399345_7.7181666083435_0.352736605702662 chr4 120815154 120815804 + 0.352736605702662 NA intron (NM_001048168, intron 1 of 9) intron (NM_001048168, intron 1 of 9) 10262 NM_001277095 18046 Mm.435590 NM_008692 ENSMUSG00000032897 Nfyc - nuclear transcription factor-Y gamma protein-coding common_peak1_91_690_-0.0408564739220356_9.41211366342724_0.352687671327256 chr2 32756916 32757818 + 0.352687671327256 NA exon (NM_152800, exon 1 of 5) exon (NM_152800, exon 1 of 5) 133 NM_152800 30933 Mm.200695 NM_152800 ENSMUSG00000009563 Tor2a Prosalusin torsin family 2, member A protein-coding common_peak2_40_260_-0.0664627315044592_7.99467463081766_0.352654478471321 chr14 122533488 122534907 + 0.352654478471321 NA promoter-TSS (NM_144844) promoter-TSS (NM_144844) -131 NM_144844 110821 Mm.23876 NM_144844 ENSMUSG00000041650 Pcca C79630 propionyl-Coenzyme A carboxylase, alpha polypeptide protein-coding common_peak2_40_260_-0.0664627315044592_7.99467463081766_0.352654478471321-2 chr6 108212392 108213798 + 0.352654478471321 NA promoter-TSS (NM_010585) promoter-TSS (NM_010585) -1 NM_010585 16438 Mm.227912 NM_010585 ENSMUSG00000030102 Itpr1 D6Pas2|ENSMUSG00000072853|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo inositol 1,4,5-trisphosphate receptor 1 protein-coding common_peak1_75_547_-0.0444432571909239_9.07581045436507_0.35259932300632 chr15 5185341 5186463 + 0.35259932300632 NA intron (NM_026213, intron 1 of 4) CpG 342 NM_026213 67515 Mm.254979 NM_026213 ENSMUSG00000022151 Ttc33 2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf tetratricopeptide repeat domain 33 protein-coding common_peak2_157_1329_-0.02849912808888_10.3629609663441_0.352575405794834 chr6 86370586 86372444 + 0.352575405794834 NA promoter-TSS (NM_026506) promoter-TSS (NM_026506) -25 NM_026506 68011 Mm.276802 NM_026506 ENSMUSG00000057278 Snrpg 2810024K17Rik|AL022803|SMG|sm-G|snRNP-G small nuclear ribonucleoprotein polypeptide G protein-coding common_peak2_85_601_0.0387198046806034_9.2529795791_0.352512839784047 chr8 72267852 72269330 + 0.352512839784047 NA Intergenic Intergenic 28459 NM_007456 11767 Mm.290086 NM_007456 ENSMUSG00000003033 Ap1m1 AA408894|AP47|Adtm1A|Cltnm|mu1A adaptor-related protein complex AP-1, mu subunit 1 protein-coding common_peak1_83_618_-0.0430963330430529_9.25224743269274_0.352512839783849 chr8 105859924 105861268 + 0.352512839783849 NA promoter-TSS (NR_033574) promoter-TSS (NR_033574) -38 NM_026532 68051 Mm.455474 NM_026532 ENSMUSG00000008450 Nutf2 2700067I02Rik|AI115459|AI413596|AW546000|Ntf2|Ntf3|PP15 nuclear transport factor 2 protein-coding common_peak2_137_1128_-0.0316221393398504_10.1250187011031_0.352473310342808 chr17 17599116 17602570 + 0.352473310342808 NA intron (NM_172827, intron 1 of 17) intron (NM_172827, intron 1 of 17) 23646 NM_172827 240028 Mm.328807 NM_172827 ENSMUSG00000023845 Lnpep 2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165 leucyl/cystinyl aminopeptidase protein-coding unique_peak2_14_79_-0.139883973476015_6.25198610814935_0.352472969721833-3 chr7 105811229 105811883 + 0.352472969721833 NA promoter-TSS (NM_025301) promoter-TSS (NM_025301) -469 NM_025301 27397 Mm.44225 NM_025301 ENSMUSG00000030879 Mrpl17 MRP-L26|Rpml26 mitochondrial ribosomal protein L17 protein-coding unique_peak2_14_79_-0.139883973476015_6.25198610814935_0.352472969721833 chr10 118141112 118141749 + 0.352472969721833 NA promoter-TSS (NM_010785) promoter-TSS (NM_010785) -357 NM_001162904 17245 Mm.101191 NM_010785 ENSMUSG00000020212 Mdm1 Arrd2|Mdm-1 transformed mouse 3T3 cell double minute 1 protein-coding common_peak1_14_79_-0.139883973476015_6.25198610814935_0.352472969721833 chr17 27017968 27018320 + 0.352472969721833 NA exon (NM_001251881, exon 1 of 7) exon (NM_001251881, exon 1 of 7) 109 NM_001251881 70772 Mm.440437 NM_027544 ENSMUSG00000048731 Ggnbp1 0610031G08Rik|mdf gametogenetin binding protein 1 protein-coding common_peak1_15_73_0.0867998974962179_6.25285331437706_0.352472969721833-2 chr6 65525388 65525797 + 0.352472969721833 NA Intergenic Intergenic -64806 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak1_15_73_0.0867998974962179_6.25285331437706_0.352472969721833 chr1 127322499 127322857 + 0.352472969721833 NA intron (NM_145128, intron 4 of 17) B4A|SINE|B4 117692 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding unique_peak2_14_79_-0.139883973476015_6.25198610814935_0.352472969721833-2 chr4 11084500 11085086 + 0.352472969721833 NA Intergenic Intergenic -8588 NM_001085493 76947 Mm.275265 NM_001085493 ENSMUSG00000050323 Ndufaf6 2310030N02Rik NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 protein-coding unique_peak2_15_73_0.0867998974962179_6.25285331437706_0.352472969721833-3 chr6 8556482 8557081 + 0.352472969721833 NA intron (NM_133236, intron 2 of 7) intron (NM_133236, intron 2 of 7) 36723 NM_001286729 170772 Mm.210787 NM_133236 ENSMUSG00000029638 Glcci1 2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1 glucocorticoid induced transcript 1 protein-coding common_peak1_14_79_-0.139883973476015_6.25198610814935_0.352472969721833-2 chr6 91113275 91113610 + 0.352472969721833 NA intron (NM_018815, intron 1 of 39) B3|SINE|B2 3384 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding unique_peak2_15_73_0.0867998974962179_6.25285331437706_0.352472969721833 chr2 122702079 122702788 + 0.352472969721833 NA 5' UTR (NM_011774, exon 1 of 7) 5' UTR (NM_011774, exon 1 of 7) 230 NM_011774 22785 Mm.27801 NM_011774 ENSMUSG00000005802 Slc30a4 Znt4|lm|znT-4 solute carrier family 30 (zinc transporter), member 4 protein-coding unique_peak2_14_79_-0.139883973476015_6.25198610814935_0.352472969721833-5 chrX 59589201 59589952 + 0.352472969721833 NA Intergenic Intergenic -4004 NM_001290414 14168 Mm.7995 NM_010200 ENSMUSG00000031137 Fgf13 Fhf2 fibroblast growth factor 13 protein-coding unique_peak2_15_73_0.0867998974962179_6.25285331437706_0.352472969721833-2 chr2 166688582 166689290 + 0.352472969721833 NA intron (NR_105783, intron 2 of 2) MER20|DNA|hAT-Charlie 16218 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA unique_peak2_14_79_-0.139883973476015_6.25198610814935_0.352472969721833-4 chr8 10534404 10535074 + 0.352472969721833 NA intron (NM_001081397, intron 28 of 35) intron (NM_001081397, intron 28 of 35) 347715 NR_040705 320014 Mm.403203 NR_040705 ENSMUSG00000109473 B930025P03Rik - RIKEN cDNA B930025P03 gene ncRNA common_peak1_48_298_0.0528745627125797_8.25043895555439_0.352462944890394 chr19 31082780 31083587 + 0.352462944890394 NA exon (NM_031249, exon 1 of 1) exon (NM_031249, exon 1 of 1) 342 NM_031249 83410 Mm.22031 NM_031249 ENSMUSG00000053536 Cstf2t 64kDa|C77975|tCstF-64|tauCstF-64 cleavage stimulation factor, 3' pre-RNA subunit 2, tau protein-coding common_peak2_48_298_0.0528745627125797_8.25043895555439_0.352462944890394 chr8 117267010 117268669 + 0.352462944890394 NA intron (NM_001163262, intron 1 of 20) (TGAA)n|Simple_repeat|Simple_repeat 10820 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak2_77_533_0.0388598291066629_9.08012584624089_0.352408664619353 chr2 68907371 68909312 + 0.352408664619353 NA intron (NM_172856, intron 1 of 9) RMER15|LTR|ERVL 46784 NM_172856 241447 Mm.222222 NM_172856 ENSMUSG00000027035 Cers6 4732462C07Rik|AW544719|Lass6|T1L ceramide synthase 6 protein-coding common_peak2_150_1209_0.0277290528235952_10.2546558585738_0.352249825470654 chr7 75847696 75849948 + 0.352249825470654 NA intron (NM_182782, intron 1 of 1) intron (NM_182782, intron 1 of 1) 484 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_140_1111_0.0283245308557962_10.1331033381514_0.352198325293821 chr4 32614190 32616366 + 0.352198325293821 NA promoter-TSS (NM_001122978) promoter-TSS (NM_001122978) -195 NM_001122978 26885 Mm.22279 NM_011997 ENSMUSG00000028282 Casp8ap2 D4Ertd659e|FLASH caspase 8 associated protein 2 protein-coding common_peak2_275_2620_-0.0200816957089121_11.345860790474_0.352136119549802 chr12 100198850 100202074 + 0.352136119549802 NA intron (NM_001313934, intron 1 of 5) CpG 318 NM_001313934 12313 Mm.285993 NM_009790 ENSMUSG00000001175 Calm1 AI256814|AI327027|AI461935|AL024000|CaM|Calm calmodulin 1 protein-coding common_peak1_30_168_0.0658027684521221_7.43378082050824_0.352018175442567 chr11 83064244 83064752 + 0.352018175442567 NA promoter-TSS (NM_011408) promoter-TSS (NM_011408) -614 NM_011408 20556 Mm.278689 NM_011408 ENSMUSG00000072620 Slfn2 Shlf2 schlafen 2 protein-coding common_peak2_30_168_0.0658027684521221_7.43378082050824_0.352018175442567 chr1 36722130 36723258 + 0.352018175442567 NA intron (NR_040290, intron 2 of 8) intron (NR_040290, intron 2 of 8) 8156 NR_040290 71166 Mm.157049 NR_040290 ENSMUSG00000102416 4933424G06Rik 1700104I15Rik RIKEN cDNA 4933424G06 gene ncRNA common_peak1_94_681_0.0348418612510386_9.43104885964969_0.352013837089736 chr18 74778704 74779855 + 0.352013837089736 NA promoter-TSS (NR_028560) promoter-TSS (NR_028560) 67 NM_177470 52538 Mm.245724 NM_177470 ENSMUSG00000036880 Acaa2 0610011L04Rik|AI255831|AI265397|D18Ertd240e acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) protein-coding common_peak2_172_1431_0.0253947542282926_10.4965131543784_0.351858776084141 chr2 165991914 165994259 + 0.351858776084141 NA intron (NM_008679, intron 1 of 22) CpG 449 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak2_42_253_0.0570424834817853_8.01720592851306_0.351855525491297 chr4 135544699 135546013 + 0.351855525491297 NA intron (NM_001013756, intron 15 of 15) intron (NM_001013756, intron 15 of 15) 28264 NM_001013756 230824 Mm.331972 NM_001013756 ENSMUSG00000037188 Grhl3 AI561912|Get1|Som|Tfcp2l4|ct grainyhead-like 3 (Drosophila) protein-coding common_peak2_70_474_0.0413758426287067_8.91247162453266_0.351767384117516 chr10 75859409 75860544 + 0.351767384117516 NA intron (NM_010798, intron 1 of 2) CpG-1170 274 NM_010798 17319 Mm.2326 NM_010798 ENSMUSG00000033307 Mif GIF|Glif macrophage migration inhibitory factor protein-coding common_peak2_86_610_0.0377692608471225_9.27391320024229_0.351763648214287 chr13 100103176 100104301 + 0.351763648214287 NA exon (NM_001081061, exon 1 of 39) exon (NM_001081061, exon 1 of 39) 332 NM_001081061 544971 Mm.288546 NM_001081061 ENSMUSG00000049658 Bdp1 AI662220|AW049390|AW456745|B130055N23Rik|G630013P12Rik|TAF3B1|TFC5|TFIIIB150|TFIIIB90|Tfnr|mKIAA1241 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB protein-coding common_peak1_61_428_-0.0515393215788826_8.7190641767101_0.351579663720904 chr8 105622489 105623544 + 0.351579663720904 NA TTS (NM_001081241) TTS (NM_001081241) 7550 NR_035492 100316712 NR_035492 ENSMUSG00000089432 Mir1966 mir-1966|mmu-mir-1966 microRNA 1966 ncRNA common_peak1_36_210_0.0586844625042247_7.7504414199593_0.351533906962213 chr15 81360163 81360928 + 0.351533906962213 NA intron (NM_011399, intron 1 of 8) intron (NM_011399, intron 1 of 8) 220 NM_011399 20524 Mm.222536 NM_011399 ENSMUSG00000022404 Slc25a17 34kDa|47kDa|PMP34|Pmp47 solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 protein-coding common_peak1_36_210_0.0586844625042247_7.7504414199593_0.351533906962213-2 chr16 13061024 13061691 + 0.351533906962213 NA Intergenic Intergenic -48379 NM_015769 50505 Mm.287837 NM_015769 ENSMUSG00000022545 Ercc4 AI606920|Xpf excision repair cross-complementing rodent repair deficiency, complementation group 4 protein-coding unique_peak2_36_210_0.0586844625042247_7.7504414199593_0.351533906962213 chr15 78557556 78559192 + 0.351533906962213 NA TTS (NM_009008) TTS (NM_009008) -14029 NM_009218 20607 Mm.211411 NM_009218 ENSMUSG00000044933 Sstr3 Smstr-3|Smstr3|sst3 somatostatin receptor 3 protein-coding common_peak1_54_370_-0.0539843582348869_8.50828319750336_0.351511205698896 chr3 97658235 97658989 + 0.351511205698896 NA 5' UTR (NM_182997, exon 2 of 8) 5' UTR (NM_182997, exon 2 of 8) 400 NM_182997 108097 Mm.31175 NM_182997 ENSMUSG00000038205 Prkab2 5730553K21Rik|AW049591|BB124140 protein kinase, AMP-activated, beta 2 non-catalytic subunit protein-coding common_peak1_29_179_-0.0831966637319717_7.45025476446369_0.351433653347123-2 chr15 93298982 93299526 + 0.351433653347123 NA intron (NM_024189, intron 2 of 3) B4A|SINE|B4 -24170 NM_001033275 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak1_29_179_-0.0831966637319717_7.45025476446369_0.351433653347123-3 chr5 115118926 115119421 + 0.351433653347123 NA intron (NM_007383, intron 1 of 9) CpG 173 NM_007383 11409 Mm.18759 NM_007383 ENSMUSG00000029545 Acads AI196007|Bcd-1|Bcd1|Hdlq8|SCAD acyl-Coenzyme A dehydrogenase, short chain protein-coding common_peak1_29_179_-0.0831966637319717_7.45025476446369_0.351433653347123 chr11 43395623 43396259 + 0.351433653347123 NA Intergenic Lx5c|LINE|L1 -21480 NR_029558 387164 NR_029558 ENSMUSG00000065601 Mir146 Mirn146|miR-146a|mmu-mir-146 microRNA 146 ncRNA unique_peak2_29_179_-0.0831966637319717_7.45025476446369_0.351433653347123 chr18 11839207 11840599 + 0.351433653347123 NA promoter-TSS (NR_045421) promoter-TSS (NR_045421) -526 NR_045421 621998 Mm.353277 NR_045421 Gm6277 - predicted gene 6277 ncRNA common_peak2_193_1705_-0.0244512567685256_10.724176302934_0.351368665628465 chr4 108999659 109001699 + 0.351368665628465 NA promoter-TSS (NM_146150) promoter-TSS (NM_146150) -126 NM_146150 230598 Mm.274950 NM_146150 ENSMUSG00000053510 Nrd1 2600011I06Rik|AI875733|NRD-C|Nrdc nardilysin, N-arginine dibasic convertase, NRD convertase 1 protein-coding common_peak1_63_416_0.0455743120532173_8.72669072947127_0.35134063632534-2 chr2 150607876 150609172 + 0.35134063632534 NA promoter-TSS (NM_027977) promoter-TSS (NM_027977) -1 NM_027977 71881 Mm.26599 NM_027977 ENSMUSG00000033096 Apmap 2310001A20Rik|AI314817 adipocyte plasma membrane associated protein protein-coding common_peak1_63_416_0.0455743120532173_8.72669072947127_0.35134063632534 chr2 60382538 60383378 + 0.35134063632534 NA intron (NM_013825, intron 1 of 34) intron (NM_013825, intron 1 of 34) 273 NM_013825 17076 Mm.2074 NM_013825 ENSMUSG00000026980 Ly75 CD205|DEC-205|DEC205 lymphocyte antigen 75 protein-coding common_peak1_142_1131_0.0275321037505449_10.1584242947072_0.351302569089624 chr1 36368217 36369188 + 0.351302569089624 NA intron (NM_001310513, intron 1 of 21) CpG 479 NM_172652 226976 Mm.24734 NM_172652 ENSMUSG00000010453 Kansl3 4632411B12Rik|4932435K23|AI431067|AI647574|C85723|Kiaa1310|mKIAA1310 KAT8 regulatory NSL complex subunit 3 protein-coding common_peak1_56_360_0.0486436926630027_8.52017687321867_0.35109794627949 chr10 127311074 127311798 + 0.35109794627949 NA intron (NM_001003913, intron 1 of 20) intron (NM_001003913, intron 1 of 20) 350 NM_001003913 216443 Mm.28173 NM_001003913 ENSMUSG00000040354 Mars Metrs|Mtrns methionine-tRNA synthetase protein-coding common_peak1_35_222_-0.0696022268612815_7.76609878648966_0.351068350339208-2 chr16 18425898 18426548 + 0.351068350339208 NA promoter-TSS (NM_013711) promoter-TSS (NM_013711) -194 NM_013711 26462 Mm.390906 NM_013711 ENSMUSG00000075704 Txnrd2 AA118373|ESTM573010|TGR|Tr3|Trxr2|Trxrd2 thioredoxin reductase 2 protein-coding common_peak1_35_222_-0.0696022268612815_7.76609878648966_0.351068350339208-4 chr6 137754482 137755012 + 0.351068350339208 NA intron (NM_172733, intron 1 of 8) intron (NM_172733, intron 1 of 8) 170 NM_172733 232449 Mm.29181 NM_172733 ENSMUSG00000030225 Dera 2010002D22Rik|2500002K03Rik|DEOC deoxyribose-phosphate aldolase (putative) protein-coding common_peak1_35_222_-0.0696022268612815_7.76609878648966_0.351068350339208 chr15 76193375 76194163 + 0.351068350339208 NA intron (NM_201385, intron 3 of 31) intron (NM_201385, intron 3 of 31) 1941 NM_201394 18810 Mm.234912 NM_011117 ENSMUSG00000022565 Plec AA591047|AU042537|EBS1|PCN|PLTN|Plec1 plectin protein-coding common_peak1_35_222_-0.0696022268612815_7.76609878648966_0.351068350339208-3 chr2 168472782 168473551 + 0.351068350339208 NA Intergenic Intergenic 117199 NM_001291178 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak1_267_2527_-0.0200124256546665_11.2937745353498_0.351034802381968 chr11 5788460 5790446 + 0.351034802381968 NA intron (NM_013810, intron 1 of 12) intron (NM_013810, intron 1 of 12) 970 NM_013810 13169 Mm.256925 NM_013810 ENSMUSG00000020476 Dbnl Abp1|SH3P7|mAbp1 drebrin-like protein-coding common_peak1_25_135_0.0679584033905929_7.12144204294564_0.35102762935519 chr17 30518491 30518960 + 0.35102762935519 NA intron (NM_172618, intron 4 of 11) intron (NM_172618, intron 4 of 11) 57562 NM_172618 224671 Mm.41220 NM_027060 ENSMUSG00000062202 Btbd9 1700023F20Rik|4930402L05|AI464421 BTB (POZ) domain containing 9 protein-coding common_peak2_25_135_0.0679584033905929_7.12144204294564_0.35102762935519 chr4 11960271 11961459 + 0.35102762935519 NA exon (NM_001033453, exon 2 of 2) exon (NM_001033453, exon 2 of 2) 4848 NM_001098231 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding unique_peak2_25_135_0.0679584033905929_7.12144204294564_0.35102762935519 chr15 65744304 65745170 + 0.35102762935519 NA Intergenic Intergenic -42304 NM_133766 76740 Mm.260647 NM_133766 ENSMUSG00000015002 Efr3a A130089M23Rik|BB071175|C76891|C920006C10Rik|D030063F01Rik|mKIAA0143 EFR3 homolog A protein-coding common_peak1_20_103_0.0770349256574061_6.73895718096979_0.350993051678368-4 chr6 31519426 31519856 + 0.350993051678368 NA 3' UTR (NM_013723, exon 8 of 8) 3' UTR (NM_013723, exon 8 of 8) 44296 NM_013723 27205 Mm.89918 NM_013723 ENSMUSG00000025608 Podxl AW121214|Ly102|PC|PCLP-1|Pclp1 podocalyxin-like protein-coding common_peak1_20_103_0.0770349256574061_6.73895718096979_0.350993051678368 chr1 131205556 131206183 + 0.350993051678368 NA intron (NM_018750, intron 2 of 5) L1MEc|LINE|L1 -5684 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding unique_peak2_20_103_0.0770349256574061_6.73895718096979_0.350993051678368 chr10 121583129 121584174 + 0.350993051678368 NA intron (NM_019786, intron 2 of 20) B1_Mur4|SINE|Alu 3143 NM_019786 56480 Mm.34580 NM_019786 ENSMUSG00000020115 Tbk1 1200008B05Rik|AI462036|AW048562 TANK-binding kinase 1 protein-coding common_peak1_19_110_-0.10328163871933_6.74277504699044_0.350993051678368 chr8 72329790 72330182 + 0.350993051678368 NA Intergenic Intergenic 10924 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding unique_peak2_19_110_-0.10328163871933_6.74277504699044_0.350993051678368 chr10 61235481 61236196 + 0.350993051678368 NA intron (NM_001081127, intron 4 of 21) intron (NM_001081127, intron 4 of 21) 37600 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak1_20_103_0.0770349256574061_6.73895718096979_0.350993051678368-3 chr2 166597972 166598488 + 0.350993051678368 NA intron (NM_177782, intron 14 of 39) intron (NM_177782, intron 14 of 39) -74488 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_20_103_0.0770349256574061_6.73895718096979_0.350993051678368-2 chr18 14654054 14654501 + 0.350993051678368 NA intron (NM_009280, intron 4 of 10) intron (NM_009280, intron 4 of 10) 28637 NM_001161369 268996 Mm.31761 NM_009280 ENSMUSG00000037013 Ss18 D130059H17|Ssxt|Syt SS18, nBAF chromatin remodeling complex subunit protein-coding common_peak2_19_110_-0.10328163871933_6.74277504699044_0.350993051678368 chr3 153764204 153764911 + 0.350993051678368 NA Intergenic Intergenic 27530 NR_045801 70594 Mm.491050 NR_045801 ENSMUSG00000062046 5730460C07Rik - RIKEN cDNA 5730460C07 gene ncRNA unique_peak2_20_103_0.0770349256574061_6.73895718096979_0.350993051678368-2 chr17 26630980 26631742 + 0.350993051678368 NA intron (NM_026170, intron 5 of 9) intron (NM_026170, intron 5 of 9) -45035 NM_025272 11974 Mm.22602 NM_025272 ENSMUSG00000015575 Atp6v0e Atp6k|Atp6v0e1|M9.2 ATPase, H+ transporting, lysosomal V0 subunit E protein-coding common_peak1_153_1240_0.0260464518290657_10.2903106260449_0.350981563517566 chr7 80386479 80388627 + 0.350981563517566 NA intron (NM_010194, intron 1 of 18) intron (NM_010194, intron 1 of 18) 393 NM_010194 14159 Mm.48757 NM_010194 ENSMUSG00000053158 Fes AI586313|BB137047|FPS|c-fes feline sarcoma oncogene protein-coding common_peak2_153_1240_0.0260464518290657_10.2903106260449_0.350981563517566 chr4 32279596 32282392 + 0.350981563517566 NA Intergenic RSINE1|SINE|B4 -136441 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak2_183_1599_-0.0255584521221461_10.6310769637137_0.350951866206761 chr10 121585551 121588226 + 0.350951866206761 NA promoter-TSS (NM_019786) promoter-TSS (NM_019786) -94 NM_019786 56480 Mm.34580 NM_019786 ENSMUSG00000020115 Tbk1 1200008B05Rik|AI462036|AW048562 TANK-binding kinase 1 protein-coding common_peak2_121_971_-0.0336807413724518_9.90797213291955_0.35088103193652 chr16 30510138 30511634 + 0.35088103193652 NA TTS (NM_172614) TTS (NM_172614) 39692 NM_172614 224090 Mm.241459 NM_172614 ENSMUSG00000022537 Tmem44 1700007N03Rik|9330161C17Rik|B230220N21 transmembrane protein 44 protein-coding common_peak1_79_550_0.0384503414323305_9.12513367928732_0.350843255721688 chr19 16780047 16781008 + 0.350843255721688 NA intron (NM_173028, intron 1 of 71) CpG 406 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding common_peak2_96_699_0.0341272515310802_9.46827473759787_0.350717566995231 chr8 111033185 111034740 + 0.350717566995231 NA 5' UTR (NM_146217, exon 1 of 21) 5' UTR (NM_146217, exon 1 of 21) 120 NM_146217 234734 Mm.24174 NM_146217 ENSMUSG00000031960 Aars AI316495|C76919|sti alanyl-tRNA synthetase protein-coding common_peak1_24_144_-0.0938938978785506_7.13296214107566_0.350670405822887-2 chr10 21188708 21189273 + 0.350670405822887 NA Intergenic Intergenic -28006 NM_010848 17863 Mm.52109 NM_010848 ENSMUSG00000019982 Myb AI550390|M16449|c-myb myeloblastosis oncogene protein-coding common_peak1_24_144_-0.0938938978785506_7.13296214107566_0.350670405822887-4 chr3 115683166 115683661 + 0.350670405822887 NA Intergenic PB1D10|SINE|Alu 31642 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding common_peak1_24_144_-0.0938938978785506_7.13296214107566_0.350670405822887 chr1 161798631 161799135 + 0.350670405822887 NA Intergenic C-rich|Low_complexity|Low_complexity -10388 NM_010177 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_24_144_-0.0938938978785506_7.13296214107566_0.350670405822887-3 chr18 60843738 60844298 + 0.350670405822887 NA intron (NM_011552, intron 2 of 24) intron (NM_011552, intron 2 of 24) 4946 NM_011552 21453 Mm.486251 NM_011552 ENSMUSG00000024613 Tcof1 AA408847|AW209012|treacle treacle ribosome biogenesis factor 1 protein-coding common_peak2_282_2700_-0.0191358350662032_11.3897100069759_0.350611963427048 chr18 34953377 34956466 + 0.350611963427048 NA promoter-TSS (NM_010481) promoter-TSS (NM_010481) -570 NM_010481 15526 Mm.209419 NM_010481 ENSMUSG00000024359 Hspa9 74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74 heat shock protein 9 protein-coding common_peak2_259_2369_0.0194677989199867_11.2204052432456_0.350595124774105 chr12 100983808 100990281 + 0.350595124774105 NA intron (NM_026681, intron 3 of 29) (CGG)n|Simple_repeat|Simple_repeat 34724 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA unique_peak2_48_322_-0.0585141177832398_8.3061332958023_0.350509555514803 chr7 127188385 127189951 + 0.350509555514803 NA Intergenic Intergenic 6909 NM_001285907 70233 Mm.28050 NM_027353 ENSMUSG00000042502 Cd2bp2 1500011B02Rik|2410024K20Rik|AW048183 CD2 antigen (cytoplasmic tail) binding protein 2 protein-coding common_peak1_165_1360_0.02566682885071_10.4232847659293_0.350472218562272 chr10 93374656 93376308 + 0.350472218562272 NA Intergenic Intergenic 39250 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak1_144_1151_0.0268438999485774_10.1833469514166_0.350437636137996 chr4 152008601 152010115 + 0.350437636137996 NA exon (NM_001033352, exon 1 of 4) exon (NM_001033352, exon 1 of 4) 467 NM_001033352 242785 Mm.22306 NM_001033352 ENSMUSG00000073700 Klhl21 1810045K06Rik|D330008A20|mKIAA0469 kelch-like 21 protein-coding common_peak2_134_1053_0.0286540020807013_10.0559861526776_0.350419627662335 chr18 74777996 74780578 + 0.350419627662335 NA promoter-TSS (NR_028560) promoter-TSS (NR_028560) 75 NM_177470 52538 Mm.245724 NM_177470 ENSMUSG00000036880 Acaa2 0610011L04Rik|AI255831|AI265397|D18Ertd240e acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) protein-coding common_peak2_338_3365_-0.017165447004265_11.7082367378278_0.350392246999944 chr4 138325300 138328644 + 0.350392246999944 NA promoter-TSS (NM_026880) promoter-TSS (NM_026880) -676 NM_026880 68943 Mm.18539 NM_026880 ENSMUSG00000028756 Pink1 1190006F07Rik|AU042772|AW557854|BRPK|mFLJ00387 PTEN induced putative kinase 1 protein-coding common_peak2_88_628_0.0361021618848998_9.31496728782174_0.350328831515566 chr5 122161034 122164442 + 0.350328831515566 NA intron (NM_013636, intron 1 of 6) B1_Mus1|SINE|Alu 4459 NM_013636 19047 Mm.280784 NM_013636 ENSMUSG00000004455 Ppp1cc PP-1G|PP1|dis2m1 protein phosphatase 1, catalytic subunit, gamma isoform protein-coding common_peak2_70_504_-0.0469800317921401_8.95664956174309_0.350234414078798 chr6 53589160 53590828 + 0.350234414078798 NA intron (NM_172728, intron 1 of 6) intron (NM_172728, intron 1 of 6) 16620 NM_172728 231991 Mm.227444 NM_172728 ENSMUSG00000053007 Creb5 9430076C15Rik|CRE-BPa|Crebpa|D430026C09Rik cAMP responsive element binding protein 5 protein-coding common_peak1_543_5993_-0.012705551607624_12.5429505927098_0.350231269123043 chr7 142395703 142400518 + 0.350231269123043 NA Intergenic Intergenic -10240 NM_009983 13033 Mm.231395 NM_009983 ENSMUSG00000007891 Ctsd CD|CatD cathepsin D protein-coding common_peak2_115_873_0.030398467384682_9.78668870319294_0.350215020111743 chr1 172205927 172207267 + 0.350215020111743 NA 5' UTR (NM_011063, exon 1 of 4) 5' UTR (NM_011063, exon 1 of 4) 184 NM_011063 18611 Mm.544 NM_011063 ENSMUSG00000013698 Pea15a Mat1|PEA-15|Pea15|Pkcs15 phosphoprotein enriched in astrocytes 15A protein-coding common_peak1_287_2688_0.0182805667452186_11.4019943232455_0.350190451238206 chr4 155623525 155625651 + 0.350190451238206 NA promoter-TSS (NM_007661) promoter-TSS (NM_007661) 167 NR_040441 100502734 Mm.306018 NR_040441 ENSMUSG00000086682 Gm16023 OTTMUSG00000029160 predicted gene 16023 ncRNA common_peak1_188_1597_0.0236919831770894_10.6538976845165_0.350176904252199 chr12 36156039 36158168 + 0.350176904252199 NA promoter-TSS (NM_025840) promoter-TSS (NM_025840) -21 NM_146033 217473 Mm.130422 NM_146033 ENSMUSG00000036188 Ankmy2 AI035571|ZMYND20 ankyrin repeat and MYND domain containing 2 protein-coding common_peak1_188_1597_0.0236919831770894_10.6538976845165_0.350176904252199-2 chr13 55361732 55362985 + 0.350176904252199 NA intron (NM_025828, intron 1 of 7) CpG 425 NM_025828 66890 Mm.38868 NM_025828 ENSMUSG00000021484 Lman2 1110003H06Rik|1300009F09Rik|AA408240|AL023023|AU040819|GP36B|VIP36 lectin, mannose-binding 2 protein-coding common_peak2_97_708_0.0338467308575243_9.48656518266828_0.350093840662974 chr3 95433447 95435152 + 0.350093840662974 NA promoter-TSS (NM_009709) promoter-TSS (NM_009709) -91 NM_009709 11863 Mm.250265 NM_009709 ENSMUSG00000015522 Arnt D3Ertd557e|Drnt|ESTM42|Hif1b|W08714|bHLHe2|mKIAA4051 aryl hydrocarbon receptor nuclear translocator protein-coding common_peak2_177_1483_0.0243553033297417_10.5474530282857_0.350091955019132 chr4 149306479 149309080 + 0.350091955019132 NA promoter-TSS (NM_008441) promoter-TSS (NM_008441) -46 NM_001290995 16561 Mm.402393 NM_008441 ENSMUSG00000063077 Kif1b A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204 kinesin family member 1B protein-coding common_peak1_80_559_0.0370590660479113_9.14781254996892_0.350052516156121 chr5 29434651 29435452 + 0.350052516156121 NA exon (NM_001033457, exon 1 of 11) exon (NM_001033457, exon 1 of 11) 384 NM_001033457 433864 Mm.262815 NM_001033457 ENSMUSG00000001569 Nom1 D5Kng1|Gm1040 nucleolar protein with MIF4G domain 1 protein-coding common_peak2_31_175_0.0634339556742267_7.49114859647441_0.350029353273041-2 chrX 144317775 144318759 + 0.350029353273041 NA intron (NR_037145, intron 1 of 26) CpG 301 NM_026247 67574 Mm.249084 NM_026247 ENSMUSG00000041718 Alg13 2810046O15Rik|4833435D08Rik|Glt28d1|MDS031|OTTMUSG00000018917 asparagine-linked glycosylation 13 protein-coding common_peak2_31_175_0.0634339556742267_7.49114859647441_0.350029353273041 chr11 53790386 53791842 + 0.350029353273041 NA intron (NR_033332, intron 3 of 3) RLTR11A2|LTR|ERVK 20641 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak1_31_175_0.0634339556742267_7.49114859647441_0.350029353273041 chr6 108537135 108537742 + 0.350029353273041 NA intron (NM_010585, intron 60 of 61) intron (NM_010585, intron 60 of 61) 47695 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA common_peak2_37_217_0.0587921898063204_7.79758041968009_0.349941167550319 chr8 81496908 81498377 + 0.349941167550319 NA intron (NM_001297591, intron 2 of 24) intron (NM_001297591, intron 2 of 24) 155080 NM_001297593 234515 Mm.324468 NM_001024617 ENSMUSG00000037940 Inpp4b E130107I17Rik inositol polyphosphate-4-phosphatase, type II protein-coding common_peak2_37_217_0.0587921898063204_7.79758041968009_0.349941167550319-2 chrX 50577764 50579269 + 0.349941167550319 NA intron (NR_015505, intron 15 of 19) intron (NR_015505, intron 15 of 19) 41127 NR_131207 102639259 Mm.350898 NR_131207 Gm35612 - predicted gene, 35612 ncRNA common_peak1_37_217_0.0587921898063204_7.79758041968009_0.349941167550319 chr17 21463089 21463692 + 0.349941167550319 NA exon (NM_009558, exon 5 of 5) exon (NM_009558, exon 5 of 5) 13016 NM_009558 22709 Mm.293030 NM_009558 ENSMUSG00000023892 Zfp51 Zfp-51|zfec12 zinc finger protein 51 protein-coding common_peak2_50_314_0.0484627587401771_8.32343939775737_0.349890988061728 chr9 86571233 86572671 + 0.349890988061728 NA promoter-TSS (NM_027100) promoter-TSS (NM_027100) -36 NM_001145969 69519 Mm.272517 NM_027100 ENSMUSG00000032417 Rwdd2a 1700030C20Rik|AI848608|Rwdd2 RWD domain containing 2A protein-coding common_peak2_447_4728_-0.0143054316944546_12.2001667106106_0.34985947407198 chr11 5427291 5438954 + 0.34985947407198 NA intron (NM_001080924, intron 1 of 8) intron (NM_001080924, intron 1 of 8) 11725 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding common_peak1_42_275_-0.0627972865242175_8.07712581351606_0.349780719855266 chr2 18765818 18766618 + 0.349780719855266 NA Intergenic Intergenic -5356 NR_126079 100041479 Mm.393659 NR_126079 ENSMUSG00000092353 Gm3363 - predicted gene 3363 ncRNA unique_peak2_42_275_-0.0627972865242175_8.07712581351606_0.349780719855266 chr19 40256768 40258392 + 0.349780719855266 NA intron (NM_016861, intron 1 of 6) intron (NM_016861, intron 1 of 6) 14036 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding common_peak2_42_275_-0.0627972865242175_8.07712581351606_0.349780719855266 chr16 3698722 3699946 + 0.349780719855266 NA Intergenic Intergenic 18790 NM_001161790 54483 Mm.143718 NM_019453 ENSMUSG00000022534 Mefv FMF|TRIM20|pyrin Mediterranean fever protein-coding common_peak2_289_2712_0.0177078802953776_11.4145272724296_0.349758186285885 chr4 155623395 155625887 + 0.349758186285885 NA promoter-TSS (NM_007661) promoter-TSS (NM_007661) 114 NR_040441 100502734 Mm.306018 NR_040441 ENSMUSG00000086682 Gm16023 OTTMUSG00000029160 predicted gene 16023 ncRNA unique_peak2_63_444_-0.0481836403558802_8.77356970567582_0.349728713628608 chr9 44012768 44014885 + 0.349728713628608 NA Intergenic Intergenic -29558 NM_009382 21838 Mm.3951 NM_009382 ENSMUSG00000032011 Thy1 CD90|T25|Thy-1|Thy-1.2|Thy1.1|Thy1.2 thymus cell antigen 1, theta protein-coding common_peak2_89_637_0.0353783349861185_9.33510178125793_0.349641433604366 chr7 89337943 89339491 + 0.349641433604366 NA promoter-TSS (NM_028343) promoter-TSS (NM_028343) 70 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding common_peak1_30_186_-0.08021225515333_7.50678833231097_0.349489304152591 chr10 99194820 99195442 + 0.349489304152591 NA intron (NM_027740, intron 11 of 11) B1_Mur4|SINE|Alu -68100 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 protein-coding common_peak1_30_186_-0.08021225515333_7.50678833231097_0.349489304152591-3 chr6 38345747 38346345 + 0.349489304152591 NA intron (NM_028864, intron 1 of 8) intron (NM_028864, intron 1 of 8) 8557 NM_028864 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding common_peak1_30_186_-0.08021225515333_7.50678833231097_0.349489304152591-2 chr12 112856831 112857462 + 0.349489304152591 NA intron (NM_019925, intron 1 of 2) intron (NM_019925, intron 1 of 2) 3770 NM_019925 56696 Mm.20455 NM_019925 ENSMUSG00000021298 Gpr132 G2a G protein-coupled receptor 132 protein-coding common_peak1_179_1504_0.0238554882902786_10.5674755157922_0.349412768106541 chr9 78107821 78109119 + 0.349412768106541 NA promoter-TSS (NM_001163780) promoter-TSS (NM_001163780) 186 NM_023605 71538 Mm.28584 NM_023605 ENSMUSG00000001366 Fbxo9 9030401P18Rik|AA986398 f-box protein 9 protein-coding common_peak2_56_386_-0.0516910365942369_8.57034423784729_0.349382667894153 chr16 92709433 92711435 + 0.349382667894153 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) -13105 NM_009821 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_56_386_-0.0516910365942369_8.57034423784729_0.349382667894153-2 chr3 96629381 96630787 + 0.349382667894153 NA promoter-TSS (NR_003619) promoter-TSS (NR_003619) 156 NM_001102407 60365 Mm.261972 NM_025875 ENSMUSG00000038374 Rbm8a 2310057C03Rik|AA673428|Rbm8 RNA binding motif protein 8a protein-coding common_peak1_56_386_-0.0516910365942369_8.57034423784729_0.349382667894153 chr19 44930197 44931033 + 0.349382667894153 NA promoter-TSS (NM_001081225) promoter-TSS (NM_001081225) -504 NM_001081225 226151 Mm.212609 NM_172638 ENSMUSG00000036097 Fam178a 3632432H19|6030443O07Rik|AU014917|Slf2 family with sequence similarity 178, member A protein-coding common_peak1_49_330_-0.0580599034844766_8.34165745506498_0.349287696531913 chr13 55714615 55715333 + 0.349287696531913 NA intron (NM_175150, intron 1 of 4) CpG 324 NM_175150 69672 Mm.294457 NM_175150 ENSMUSG00000021497 Txndc15 2310047H23Rik|AI854086|C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding common_peak1_49_330_-0.0580599034844766_8.34165745506498_0.349287696531913-2 chr15 81728749 81729872 + 0.349287696531913 NA intron (NM_011241, intron 1 of 16) CpG 609 NM_011241 19387 Mm.270975 NM_011241 ENSMUSG00000022391 Rangap1 C79654|Fug1|mKIAA1835 RAN GTPase activating protein 1 protein-coding common_peak2_115_913_-0.0341624181727891_9.81896914597167_0.349125605759153 chr14 36967974 36969525 + 0.349125605759153 NA promoter-TSS (NM_027045) promoter-TSS (NM_027045) 15 NM_027045 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding common_peak2_44_268_0.0547162750080084_8.09882050006063_0.34906763252416 chr8 3499714 3501044 + 0.34906763252416 NA promoter-TSS (NM_053177) promoter-TSS (NM_053177) -140 NM_053177 94178 Mm.8356 NM_053177 ENSMUSG00000004567 Mcoln1 2210015I05Rik|TRPML1|mucolipidin mucolipin 1 protein-coding common_peak1_135_1107_-0.0303689715159479_10.0985576802912_0.348977545461442 chr11 101657637 101658490 + 0.348977545461442 NA Intergenic CpG -7478 NM_025404 80981 Mm.266840 NM_025404 ENSMUSG00000034936 Arl4d 1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5 ADP-ribosylation factor-like 4D protein-coding common_peak2_26_141_0.0724604473349126_7.18597734317214_0.348958225358712 chr14 121340815 121341997 + 0.348958225358712 NA intron (NM_145465, intron 1 of 10) intron (NM_145465, intron 1 of 10) 37824 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding unique_peak2_26_141_0.0724604473349126_7.18597734317214_0.348958225358712 chr9 61676253 61677461 + 0.348958225358712 NA Intergenic Intergenic 237653 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_26_141_0.0724604473349126_7.18597734317214_0.348958225358712-2 chr2 30590925 30591606 + 0.348958225358712 NA Intergenic Intergenic -3779 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding common_peak1_97_744_-0.0376080672524832_9.52229258172328_0.348892216298931 chr15 85981399 85982335 + 0.348892216298931 NA intron (NM_009886, intron 1 of 34) intron (NM_009886, intron 1 of 34) 51910 NM_009886 12614 Mm.22680 NM_009886 ENSMUSG00000016028 Celsr1 Adgrc1|Crsh|Scy|crash cadherin, EGF LAG seven-pass G-type receptor 1 protein-coding common_peak1_148_1190_0.0269673042435077_10.2314413499859_0.348833842702971 chr7 43465068 43466736 + 0.348833842702971 NA intron (NM_001290316, intron 4 of 9) intron (NM_001290316, intron 4 of 9) 2669 NM_001290316 75690 Mm.30200 NM_001290316 ENSMUSG00000070604 Vsig10l - V-set and immunoglobulin domain containing 10 like protein-coding unique_peak2_16_79_0.0816081660868093_6.36273217793077_0.348707102394169 chr6 113644263 113644984 + 0.348707102394169 NA intron (NM_001113553, intron 1 of 11) ORR1G|LTR|ERVL-MaLR 6156 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding unique_peak2_15_85_-0.13001149157693_6.36125900891363_0.348707102394169-4 chrX 12153390 12154033 + 0.348707102394169 NA intron (NR_045434, intron 1 of 3) intron (NR_045434, intron 1 of 3) 6635 NR_045434 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_15_85_-0.13001149157693_6.36125900891363_0.348707102394169-2 chr3 51417138 51417446 + 0.348707102394169 NA intron (NM_053089, intron 1 of 19) intron (NM_053089, intron 1 of 19) 1276 NM_053089 74838 Mm.275281 NM_053089 ENSMUSG00000063273 Naa15 5730450D16Rik|6330400I15|ASTBDN|Narg1|Tbdn-1|mNAT1 N(alpha)-acetyltransferase 15, NatA auxiliary subunit protein-coding unique_peak2_16_79_0.0816081660868093_6.36273217793077_0.348707102394169-2 chr7 101599834 101600528 + 0.348707102394169 NA Intergenic Intergenic -19020 NM_019915 11872 Mm.57008 NM_019915 ENSMUSG00000030651 Art2b ART2.2|ARTC2|Art|Ly92b|Rt-6|Rt6|Rt6-2 ADP-ribosyltransferase 2b protein-coding common_peak1_15_85_-0.13001149157693_6.36125900891363_0.348707102394169 chr12 3587249 3587571 + 0.348707102394169 NA intron (NM_007886, intron 1 of 18) Charlie29a|DNA|hAT-Charlie 14369 NM_007886 13528 Mm.286202 NM_007886 ENSMUSG00000071454 Dtnb - dystrobrevin, beta protein-coding common_peak1_16_79_0.0816081660868093_6.36273217793077_0.348707102394169 chrX 103480717 103481160 + 0.348707102394169 NA non-coding (NR_001570, exon 1 of 8) non-coding (NR_001570, exon 1 of 8) 2295 NR_001570 213742 Mm.274770 NR_001463 ENSMUSG00000086503 Xist A430022B11|AI314753 inactive X specific transcripts ncRNA common_peak2_16_79_0.0816081660868093_6.36273217793077_0.348707102394169 chr2 25371693 25372329 + 0.348707102394169 NA promoter-TSS (NM_001081085) promoter-TSS (NM_001081085) -24 NM_001290407 72080 Mm.250293 NM_001081085 ENSMUSG00000026955 Sapcd2 2010317E24Rik|6030458L21Rik|AL033337|ang suppressor APC domain containing 2 protein-coding unique_peak2_15_85_-0.13001149157693_6.36125900891363_0.348707102394169-3 chr6 140307848 140308651 + 0.348707102394169 NA Intergenic Intergenic -115850 NM_144920 109135 Mm.247670 NM_144920 ENSMUSG00000030231 Plekha5 2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor pleckstrin homology domain containing, family A member 5 protein-coding unique_peak2_15_85_-0.13001149157693_6.36125900891363_0.348707102394169-2 chr6 128605529 128606294 + 0.348707102394169 NA Intergenic Intergenic 17023 NM_001159902 17057 Mm.16729 NM_010737 ENSMUSG00000030361 Klrb1a Ly55a|NKR-P1.7|NKR-P1A|NKRP12|Nkrp1-a|Nkrp1a|ly-55A killer cell lectin-like receptor subfamily B member 1A protein-coding unique_peak2_16_79_0.0816081660868093_6.36273217793077_0.348707102394169-3 chr7 132763019 132763601 + 0.348707102394169 NA intron (NM_175268, intron 3 of 4) intron (NM_175268, intron 3 of 4) 23625 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding unique_peak2_15_85_-0.13001149157693_6.36125900891363_0.348707102394169 chr3 108186268 108186861 + 0.348707102394169 NA 5' UTR (NM_001287093, exon 1 of 3) 5' UTR (NM_001287093, exon 1 of 3) 275 NM_001287093 229715 Mm.275752 NM_146137 ENSMUSG00000050947 Amigo1 Amigo|ali2 adhesion molecule with Ig like domain 1 protein-coding common_peak1_80_591_-0.0431112826360707_9.18789772431091_0.348707044013272 chr6 31080032 31081405 + 0.348707044013272 NA Intergenic Intergenic -17625 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_51_322_0.0466432011333637_8.35871195526061_0.348699121922826 chr2 26639530 26640424 + 0.348699121922826 NA promoter-TSS (NR_028571) promoter-TSS (NR_028571) 267 NR_024068 72091 Mm.27103 NR_024068 Snhg7 2610002F03Rik|AI427062 small nucleolar RNA host gene 7 ncRNA common_peak2_82_576_0.0370783605228659_9.19096668890692_0.348625400119719 chr4 53217147 53219179 + 0.348625400119719 NA Intergenic Intergenic -28033 NR_040665 78180 Mm.243847 NR_040665 ENSMUSG00000086947 4930522O17Rik - RIKEN cDNA 4930522O17 gene ncRNA common_peak1_128_996_0.0284119920090369_9.97565569040271_0.348602608831974 chr2 34870404 34871899 + 0.348602608831974 NA promoter-TSS (NM_080554) promoter-TSS (NM_080554) -189 NM_080554 66998 Mm.270632 NM_080554 ENSMUSG00000026869 Psmd5 1500032A03Rik|AW475925|S5b|W91691|mKIAA0072 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 protein-coding common_peak1_242_2180_0.0197025445054138_11.1006253268935_0.348554530413822 chr11 115163316 115164559 + 0.348554530413822 NA exon (NM_012030, exon 1 of 6) exon (NM_012030, exon 1 of 6) 596 NM_012030 26941 Mm.27842 NM_012030 ENSMUSG00000020733 Slc9a3r1 EBP-50|NHE-RF|NHERF-1|NHERF1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 protein-coding common_peak2_168_1441_-0.0260416007114124_10.4808346488851_0.348533936030509 chr15 86171899 86175155 + 0.348533936030509 NA intron (NM_145475, intron 1 of 12) intron (NM_145475, intron 1 of 12) 12614 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding common_peak2_126_1019_-0.0321427426848135_9.97828206551645_0.348508262111483 chr14 31000656 31002376 + 0.348508262111483 NA promoter-TSS (NM_029626) promoter-TSS (NM_029626) 83 NM_029626 76485 Mm.8766 NM_029626 ENSMUSG00000021916 Glt8d1 2410004H05Rik|5430414N14Rik|AI450005 glycosyltransferase 8 domain containing 1 protein-coding unique_peak2_38_224_0.0591622583908231_7.84336232041245_0.348445824821138-2 chr7 118278708 118280215 + 0.348445824821138 NA Intergenic B1_Mus2|SINE|Alu 35554 NR_027879 67745 Mm.483404 NM_183267 ENSMUSG00000055159 4930583K01Rik - RIKEN cDNA 4930583K01 gene ncRNA unique_peak2_38_224_0.0591622583908231_7.84336232041245_0.348445824821138 chr4 32587627 32589014 + 0.348445824821138 NA Intergenic MTD|LTR|ERVL-MaLR 14062 NM_010289 14610 Mm.377084 NM_010289 ENSMUSG00000051056 Gja10 Cx-57|Cx59|cx57 gap junction protein, alpha 10 protein-coding common_peak1_38_224_0.0591622583908231_7.84336232041245_0.348445824821138 chr9 65435582 65436228 + 0.348445824821138 NA exon (NM_027134, exon 1 of 9) exon (NM_027134, exon 1 of 9) 123 NM_027134 69606 Mm.287956 NM_027134 ENSMUSG00000059183 Mtfmt 2310020P08Rik mitochondrial methionyl-tRNA formyltransferase protein-coding common_peak1_57_394_-0.0504332173655406_8.6004922343817_0.34838432454584 chrX 101254179 101255121 + 0.34838432454584 NA 5' UTR (NM_018789, exon 1 of 3) 5' UTR (NM_018789, exon 1 of 3) 122 NM_018789 54601 Mm.240299 NM_018789 ENSMUSG00000042903 Foxo4 Afxh|Mllt7|afx forkhead box O4 protein-coding common_peak2_310_2956_0.0171808630137402_11.5385089596272_0.34834414201294 chr14 77858972 77866132 + 0.34834414201294 NA intron (NM_025384, intron 1 of 5) B1F|SINE|Alu 12365 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding unique_peak2_21_109_0.0784380291692912_6.82057872810931_0.34832747085371 chr1 80642046 80643022 + 0.34832747085371 NA intron (NM_001285927, intron 2 of 55) intron (NM_001285927, intron 2 of 55) 22818 NM_001285927 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding common_peak1_21_109_0.0784380291692912_6.82057872810931_0.34832747085371 chr9 72460156 72460592 + 0.34832747085371 NA 3' UTR (NM_009359, exon 12 of 12) 3' UTR (NM_009359, exon 12 of 12) 21845 NM_008613 17427 Mm.387671 NM_008613 ENSMUSG00000032221 Mns1 AW546487 meiosis-specific nuclear structural protein 1 protein-coding common_peak2_21_109_0.0784380291692912_6.82057872810931_0.34832747085371 chr14 53902669 53903623 + 0.34832747085371 NA Intergenic Intergenic 350783 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_98_753_-0.0369662494544993_9.53993758854141_0.348313209407204 chr7 92740449 92741496 + 0.348313209407204 NA promoter-TSS (NM_029494) promoter-TSS (NM_029494) 487 NR_015510 666737 Mm.473620 NR_015510 ENSMUSG00000074024 4632427E13Rik AU015482 RIKEN cDNA 4632427E13 gene ncRNA common_peak1_25_151_-0.0925062688026532_7.20167437904226_0.348305978472577 chr7 127140581 127141129 + 0.348305978472577 NA Intergenic B3|SINE|B2 -3032 NM_001037810 20737 Mm.283714 NM_009259 ENSMUSG00000051457 Spn A630014B01Rik|Cd43|Galgp|Ly-48|Ly48 sialophorin protein-coding common_peak1_32_182_0.0616201093768369_7.54650989297246_0.348189871288004 chr8 76901444 76902075 + 0.348189871288004 NA promoter-TSS (NM_001083906) promoter-TSS (NM_001083906) -749 NM_001083906 110784 Mm.324393 NM_001083906 ENSMUSG00000031618 Nr3c2 MR|Mlr nuclear receptor subfamily 3, group C, member 2 protein-coding common_peak2_129_1006_0.0276788635124685_9.98968739976302_0.348134588037573 chr8 69807527 69809522 + 0.348134588037573 NA promoter-TSS (NM_198101) promoter-TSS (NM_198101) -163 NM_198101 78816 Mm.324305 NM_198101 ENSMUSG00000036246 Gmip 5031419I10Rik Gem-interacting protein protein-coding common_peak1_216_1953_-0.0219964379686086_10.9212165329841_0.348134079397215 chr13 65240148 65242275 + 0.348134079397215 NA Intergenic CpG -35495 NM_175290 97895 Mm.315815 NM_175290 ENSMUSG00000032999 Nlrp4f C330026N02Rik|C86045|Nalp-kappa|Nalp4f NLR family, pyrin domain containing 4F protein-coding common_peak2_50_338_-0.0574706860088874_8.3764061201319_0.348124732179562 chr4 121207433 121209416 + 0.348124732179562 NA Intergenic B1F|SINE|Alu -19890 NM_001081013 109263 Mm.215745 NM_001081013 ENSMUSG00000049878 Rlf 9230110M18Rik|AI195322|MommeD8 rearranged L-myc fusion sequence protein-coding common_peak1_50_338_-0.0574706860088874_8.3764061201319_0.348124732179562 chr6 54775371 54776091 + 0.348124732179562 NA Intergenic Intergenic -41185 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding unique_peak2_20_117_-0.105168405563344_6.83005884658017_0.347910620254477 chr2 34938377 34939171 + 0.347910620254477 NA Intergenic Intergenic 22998 NM_009421 22029 Mm.239514 NM_009421 ENSMUSG00000026875 Traf1 4732496E14Rik TNF receptor-associated factor 1 protein-coding unique_peak2_20_117_-0.105168405563344_6.83005884658017_0.347910620254477-3 chrX 153139677 153140590 + 0.347910620254477 NA 5' UTR (NM_001004154, exon 1 of 11) 5' UTR (NM_001004154, exon 1 of 11) 175 NM_001004154 245670 Mm.190922 NM_001004154 ENSMUSG00000041658 Rragb - Ras-related GTP binding B protein-coding common_peak1_20_117_-0.105168405563344_6.83005884658017_0.347910620254477 chr11 57952866 57953280 + 0.347910620254477 NA Intergenic PB1D10|SINE|Alu -55991 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding unique_peak2_20_117_-0.105168405563344_6.83005884658017_0.347910620254477-2 chr2 166686361 166687250 + 0.347910620254477 NA intron (NR_105783, intron 2 of 2) intron (NR_105783, intron 2 of 2) 14087 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_20_117_-0.105168405563344_6.83005884658017_0.347910620254477-2 chr4 98281856 98282279 + 0.347910620254477 NA Intergenic MTD|LTR|ERVL-MaLR 101198 NM_053157 94043 Mm.331719 NM_053157 ENSMUSG00000028563 Tm2d1 2310026L18Rik|AA990549|Bbp TM2 domain containing 1 protein-coding common_peak2_20_117_-0.105168405563344_6.83005884658017_0.347910620254477 chrX 70476638 70477615 + 0.347910620254477 NA promoter-TSS (NM_001033328) promoter-TSS (NM_001033328) -83 NM_001033328 236848 Mm.24569 NM_001033328 ENSMUSG00000073139 Tmem185a - transmembrane protein 185A protein-coding common_peak1_20_117_-0.105168405563344_6.83005884658017_0.347910620254477-3 chr7 27356788 27357428 + 0.347910620254477 NA 3' UTR (NM_032610, exon 36 of 36) 3' UTR (NM_032610, exon 36 of 36) -1100 NM_138676 192192 Mm.21297 NM_138676 ENSMUSG00000089832 Shkbp1 B930062H15Rik|Sb1 Sh3kbp1 binding protein 1 protein-coding common_peak2_83_585_0.0359424117489624_9.21272806029673_0.347902997370078 chr4 141059922 141061628 + 0.347902997370078 NA promoter-TSS (NM_001145958) promoter-TSS (NM_001145958) -230 NM_001145958 230872 Mm.80685 NM_172122 ENSMUSG00000040860 Crocc - ciliary rootlet coiled-coil, rootletin protein-coding common_peak1_59_385_0.0428117065159803_8.61386289052607_0.347900455292378 chr7 35802040 35803156 + 0.347900455292378 NA promoter-TSS (NR_033567) promoter-TSS (NR_033567) 6 NR_033567 78547 Mm.406883 NR_033567 ENSMUSG00000044997 E130304I02Rik - RIKEN cDNA E130304I02 gene ncRNA common_peak2_140_1112_0.0270277262373426_10.1337517404606_0.347824717535528 chr18 82474619 82477054 + 0.347824717535528 NA intron (NM_010777, intron 1 of 6) intron (NM_010777, intron 1 of 6) 713 NM_001025245 17196 Mm.252063 NM_010777 ENSMUSG00000041607 Mbp C76307|Hmbpr|R75289|golli-mbp|jve|mld|shi myelin basic protein protein-coding common_peak1_90_680_-0.0391659452920248_9.39192801536606_0.34775913091108 chr5 34538699 34540222 + 0.34775913091108 NA intron (NM_011893, intron 1 of 12) intron (NM_011893, intron 1 of 12) -3905 NM_001145858 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak2_90_680_-0.0391659452920248_9.39192801536606_0.34775913091108 chr11 55135878 55137830 + 0.34775913091108 NA intron (NM_172258, intron 6 of 10) intron (NM_172258, intron 6 of 10) 14852 NM_172258 215332 Mm.87054 NM_172258 ENSMUSG00000049491 Slc36a3 PAT3|TRAMD2|tramdorin2 solute carrier family 36 (proton/amino acid symporter), member 3 protein-coding common_peak1_99_762_-0.0362994323254355_9.55738953067181_0.347748044318503 chr12 111907268 111908725 + 0.347748044318503 NA promoter-TSS (NM_011625) promoter-TSS (NM_011625) 59 NM_011625 21981 Mm.313076 NM_011625 ENSMUSG00000021285 Ppp1r13b AI449786|ASPP1|AW545810|Tp53bp2|Trp53bp2|p85 protein phosphatase 1, regulatory (inhibitor) subunit 13B protein-coding common_peak2_230_2108_-0.0214873228673422_11.03159971836_0.347717570884168 chr4 134852383 134854646 + 0.347717570884168 NA promoter-TSS (NM_025382) promoter-TSS (NM_025382) -169 NM_025382 66146 Mm.99793 NM_025382 ENSMUSG00000028826 Tmem57 1110007C24Rik|9230118A01Rik|AI317300|AI606104|C61 transmembrane protein 57 protein-coding common_peak2_52_329_0.0494195511972961_8.39103198984446_0.347702942961021 chr10 51490269 51491969 + 0.347702942961021 NA intron (NM_001291894, intron 1 of 8) intron (NM_001291894, intron 1 of 8) 221 NM_013532 14728 Mm.34408 NM_013532 ENSMUSG00000062593 Lilrb4a CD85K|Gp49b|HM18|ILT3|LIR-5|Lilrb4|gp49 leukocyte immunoglobulin-like receptor, subfamily B, member 4A protein-coding common_peak1_45_276_0.0513309492306764_8.13940764066453_0.347702265833269 chr2 92464434 92465293 + 0.347702265833269 NA Intergenic Intergenic -4345 NM_145832 228368 Mm.273990 NM_145832 ENSMUSG00000049922 Slc35c1 E430007K15Rik|fuct1 solute carrier family 35, member C1 protein-coding common_peak2_92_664_0.0336061904990377_9.39401362563807_0.347689641504254 chr5 67306229 67307811 + 0.347689641504254 NA promoter-TSS (NM_178651) promoter-TSS (NM_178651) 65 NM_001310629 109108 Mm.234455 NM_178651 ENSMUSG00000029221 Slc30a9 2310024J23Rik|AL024256|GAC63|HUEL|znT-9 solute carrier family 30 (zinc transporter), member 9 protein-coding common_peak1_92_664_0.0336061904990377_9.39401362563807_0.347689641504254 chr8 126421812 126423015 + 0.347689641504254 NA promoter-TSS (NM_174987) promoter-TSS (NM_174987) -88 NM_174987 67892 Mm.31946 NM_174987 ENSMUSG00000051671 Coa6 1810063B05Rik|AI447995 cytochrome c oxidase assembly factor 6 protein-coding unique_peak2_31_193_-0.0770472678756038_7.56138920824933_0.347689405655985 chr4 8711938 8713158 + 0.347689405655985 NA intron (NM_001277149, intron 1 of 37) MLT1H|LTR|ERVL-MaLR 22142 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak1_31_193_-0.0770472678756038_7.56138920824933_0.347689405655985 chr8 46831649 46832346 + 0.347689405655985 NA intron (NM_008391, intron 6 of 8) intron (NM_008391, intron 6 of 8) 92252 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak1_151_1221_0.0251725671372274_10.2676148533873_0.347631438791984 chr8 85026796 85027820 + 0.347631438791984 NA intron (NM_026760, intron 1 of 2) CpG 475 NM_026760 68544 Mm.196005 NM_026760 ENSMUSG00000041203 2310036O22Rik 1110002H14Rik|AI854688 RIKEN cDNA 2310036O22 gene protein-coding common_peak1_162_1331_0.0244660768501088_10.3916114054963_0.347596814412619 chr5 72867922 72869518 + 0.347596814412619 NA promoter-TSS (NM_001113464) promoter-TSS (NM_001113464) -272 NM_001113460 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak1_109_855_-0.0335636568288749_9.72468515798671_0.34738824728025 chr14 75753774 75754677 + 0.34738824728025 NA intron (NM_177381, intron 1 of 22) CpG 268 NM_177381 338337 Mm.86507 NM_177381 ENSMUSG00000034893 Cog3 E430004N23 component of oligomeric golgi complex 3 protein-coding common_peak2_111_836_0.0307055598402943_9.72443659247049_0.34738824728025 chr9 57707836 57709490 + 0.34738824728025 NA promoter-TSS (NM_153799) promoter-TSS (NM_153799) 94 NM_153799 353190 Mm.268104 NM_153799 ENSMUSG00000038957 Edc3 AA517853|Lsm16|Yjdc enhancer of mRNA decapping 3 protein-coding common_peak1_82_608_-0.0407925487379845_9.22990214353734_0.347356113083214 chr2 30252308 30253559 + 0.347356113083214 NA intron (NM_177725, intron 2 of 3) intron (NM_177725, intron 2 of 3) -13270 NM_001252568 227696 Mm.297949 NM_172267 ENSMUSG00000079484 Phyhd1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding common_peak2_58_403_-0.0526850777099703_8.63186894389681_0.347309349542923 chr12 70074483 70075836 + 0.347309349542923 NA intron (NM_001286080, intron 5 of 29) intron (NM_001286080, intron 5 of 29) 27695 NM_001081453 18080 Mm.244047 NM_008697 ENSMUSG00000021068 Nin 3110068G20Rik|AI385615|AU024711|mKIAA1565 ninein protein-coding common_peak2_102_754_0.0312150495642971_9.57594035899459_0.347135721514311 chr6 87546361 87548399 + 0.347135721514311 NA Intergenic Intergenic -14121 NM_001286610 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak1_60_393_0.042467631590597_8.64328563525167_0.346961789189251 chr9 32495572 32496571 + 0.346961789189251 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 45381 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak2_140_1156_-0.0289075455281864_10.1617193763434_0.346925577043237 chr1 16687321 16689865 + 0.346925577043237 NA exon (NM_016923, exon 1 of 5) exon (NM_016923, exon 1 of 5) 137 NM_016923 17087 Mm.116844 NM_016923 ENSMUSG00000025779 Ly96 ESOP-1|MD-2|MD2 lymphocyte antigen 96 protein-coding common_peak1_199_1714_0.0218592646352782_10.7549224933778_0.346848215617552 chr2 25464993 25466845 + 0.346848215617552 NA TTS (NM_008963) TTS (NM_008963) 3830 NM_008963 19215 Mm.1008 NM_008963 ENSMUSG00000015090 Ptgds 21kDa|L-PGDS|PGD2|PGDS|PGDS2|Ptgs3 prostaglandin D2 synthase (brain) protein-coding common_peak1_39_232_0.0535603941628526_7.89096634173571_0.346845048827794 chr14 27412318 27412880 + 0.346845048827794 NA Intergenic Intergenic -16248 NM_028945 218850 Mm.247767 NM_028945 ENSMUSG00000040651 Fam208a 4732418E12|4933409E02Rik|D14Abb1e|MommeD6 family with sequence similarity 208, member A protein-coding common_peak1_301_2922_-0.0181014176341456_11.504183404989_0.346822211124034 chr19 44293074 44296608 + 0.346822211124034 NA intron (NM_009128, intron 1 of 5) intron (NM_009128, intron 1 of 5) 1165 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_68_458_0.0402449768329873_8.8624728318303_0.3467960890685 chr2 38643191 38644495 + 0.3467960890685 NA promoter-TSS (NM_011187) promoter-TSS (NM_011187) 63 NM_011187 19177 Mm.389251 NM_011187 ENSMUSG00000026750 Psmb7 AU020723|MC14 proteasome (prosome, macropain) subunit, beta type 7 protein-coding common_peak1_27_148_0.0673962295557642_7.25286663524004_0.346750482202772 chr15 101283358 101283936 + 0.346750482202772 NA promoter-TSS (NM_026566) promoter-TSS (NM_026566) -654 NM_026566 68118 Mm.482360 NM_026566 ENSMUSG00000037204 Atg101 9430023L20Rik|AA407441|AU022967 autophagy related 101 protein-coding common_peak1_27_148_0.0673962295557642_7.25286663524004_0.346750482202772-2 chr6 145210575 145210983 + 0.346750482202772 NA promoter-TSS (NM_133688) promoter-TSS (NM_133688) 191 NM_177222 320662 Mm.207779 NM_177222 ENSMUSG00000043541 Casc1 A230084G12Rik|Las1 cancer susceptibility candidate 1 protein-coding common_peak2_224_1983_0.0200879140560772_10.9642402674149_0.346742744979747 chr6 49262846 49264633 + 0.346742744979747 NA intron (NM_198102, intron 1 of 7) CpG 313 NM_198102 101214 Mm.196598 NM_198102 ENSMUSG00000029817 Tra2a 1500010G04Rik|AL022798|G430041M01Rik|mAWMS1 transformer 2 alpha homolog (Drosophila) protein-coding common_peak2_154_1251_0.0247689446800088_10.3024033192726_0.346524046765234 chr2 165537359 165541196 + 0.346524046765234 NA Intergenic Intergenic 35380 NM_130451 170441 Mm.34147 NM_130451 ENSMUSG00000027661 Slc2a10 AA450473|Glut10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding unique_peak2_33_189_0.0602929638295793_7.60000209024574_0.346483515832232 chr4 32098959 32100350 + 0.346483515832232 NA Intergenic Intergenic 135547 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_33_189_0.0602929638295793_7.60000209024574_0.346483515832232 chr14 60739594 60740187 + 0.346483515832232 NA intron (NM_001310594, intron 1 of 9) intron (NM_001310594, intron 1 of 9) 6986 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak2_26_157_-0.0815731813375082_7.26299415750835_0.346451587157257 chrX 152326958 152328138 + 0.346451587157257 NA promoter-TSS (NR_040270) promoter-TSS (NR_040270) -55 NR_040270 72997 Mm.254833 NR_040269 Kantr 2810454L23Rik|2900056M20Rik|Spasm Kdm5c adjacent non-coding transcript ncRNA common_peak1_46_284_0.0483129783739127_8.17897459823906_0.346412373840399 chr7 80269648 80270261 + 0.346412373840399 NA 5' UTR (NM_178070, exon 1 of 23) 5' UTR (NM_178070, exon 1 of 23) 299 NM_178070 233405 Mm.322870 NM_178070 ENSMUSG00000030534 Vps33b - vacuolar protein sorting 33B protein-coding common_peak2_46_284_0.0483129783739127_8.17897459823906_0.346412373840399 chr14 63605874 63607444 + 0.346412373840399 NA exon (NM_173393, exon 1 of 3) exon (NM_173393, exon 1 of 3) 129 NM_173393 219149 Mm.32071 NM_173393 ENSMUSG00000035067 Xkr6 2700008G24Rik|BC024502|Xrg6 X-linked Kx blood group related 6 protein-coding common_peak1_75_546_-0.041808197022954_9.07449292428108_0.346396484892077 chr14 66200095 66201144 + 0.346396484892077 NA intron (NM_172498, intron 2 of 29) B3A|SINE|B2 12933 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_77_534_0.0361606795057074_9.08147542104136_0.346145130883559 chr11 101253546 101254553 + 0.346145130883559 NA exon (NM_026776, exon 2 of 6) exon (NM_026776, exon 2 of 6) 342 NM_026776 28084 Mm.301020 NM_026776 ENSMUSG00000078656 Vps25 1110020N13Rik|AW107467|D11Wsu68e vacuolar protein sorting 25 protein-coding common_peak1_61_401_0.0422428247417344_8.6721731035498_0.346059983472996 chr8 124278518 124279469 + 0.346059983472996 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 47599 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding common_peak2_69_466_0.0407792860002285_8.88766838270978_0.34602197551632 chr9 73088597 73090424 + 0.34602197551632 NA intron (NM_023635, intron 5 of 5) intron (NM_023635, intron 5 of 5) -12888 NM_025890 66991 Mm.471745 NM_025890 ENSMUSG00000092622 Khdc3 2410004A20Rik|AI467128|FILIA|OEEP48 KH domain containing 3, subcortical maternal complex member protein-coding common_peak1_32_200_-0.0737317435180485_7.6141858194199_0.346018435608843 chr2 27426453 27427102 + 0.346018435608843 NA promoter-TSS (NM_009500) promoter-TSS (NM_009500) 48 NM_009500 22325 Mm.179011 NM_009500 ENSMUSG00000009621 Vav2 2810040F13Rik|AI847175|Vav-2 vav 2 oncogene protein-coding common_peak2_134_1054_0.027285870123368_10.0566702186562_0.346010496448228 chr17 26513478 26516189 + 0.346010496448228 NA Intergenic Intergenic -6361 NM_013642 19252 Mm.239041 NM_013642 ENSMUSG00000024190 Dusp1 3CH134|MKP1|Ptpn16|U19515|erp|mkp-1 dual specificity phosphatase 1 protein-coding common_peak2_45_298_-0.0589285589182396_8.19453739473899_0.345946858397269 chr11 102309015 102309934 + 0.345946858397269 NA exon (NM_001044383, exon 12 of 20) exon (NM_001044383, exon 12 of 20) 7813 NM_001044383 21429 Mm.2845 NM_011551 ENSMUSG00000020923 Ubtf A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1 upstream binding transcription factor, RNA polymerase I protein-coding common_peak1_86_611_0.0354099879732015_9.27509283667925_0.34593406781763 chr2 79635329 79636684 + 0.34593406781763 NA intron (NM_080558, intron 1 of 17) CpG 581 NM_080558 70599 Mm.272881 NM_080558 ENSMUSG00000027007 Ssfa2 5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927 sperm specific antigen 2 protein-coding common_peak2_86_611_0.0354099879732015_9.27509283667925_0.34593406781763 chr1 165182748 165185348 + 0.34593406781763 NA intron (NM_145512, intron 4 of 7) intron (NM_145512, intron 4 of 7) 10385 NM_145512 108735 Mm.288369 NM_145512 ENSMUSG00000040848 Sft2d2 2010005O13Rik|AI506168|AW561909|cI-45 SFT2 domain containing 2 protein-coding common_peak2_167_1382_0.0237261362070722_10.445448509254_0.345893107429077 chr11 17952494 17954422 + 0.345893107429077 NA promoter-TSS (NR_131915) promoter-TSS (NR_131915) 417 NM_026576 68145 Mm.178684 NM_026576 ENSMUSG00000016984 Etaa1 5730466H23Rik|AA672646 Ewing tumor-associated antigen 1 protein-coding common_peak2_95_691_0.0323718628280822_9.45081415905077_0.345888535434617-2 chr9 64340074 64341647 + 0.345888535434617 NA promoter-TSS (NM_001177784) promoter-TSS (NM_001177784) -87 NM_001177784 213550 Mm.268341 NM_172519 ENSMUSG00000032396 Dis3l AV340375 DIS3 like exosome 3'-5' exoribonuclease protein-coding common_peak2_95_691_0.0323718628280822_9.45081415905077_0.345888535434617 chr14 27228356 27231437 + 0.345888535434617 NA intron (NM_001289686, intron 3 of 12) intron (NM_001289686, intron 3 of 12) -8114 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding common_peak2_339_3301_0.0157420653119473_11.6969954375692_0.34580723798185 chr14 27401206 27406948 + 0.34580723798185 NA TTS (NM_027871) TTS (NM_027871) -24770 NM_028945 218850 Mm.247767 NM_028945 ENSMUSG00000040651 Fam208a 4732418E12|4933409E02Rik|D14Abb1e|MommeD6 family with sequence similarity 208, member A protein-coding common_peak2_254_2315_0.0183568260165412_11.1865979509975_0.34580151187539 chr17 21449563 21452710 + 0.34580151187539 NA intron (NM_009558, intron 1 of 4) Lx5b|LINE|L1 762 NM_009558 22709 Mm.293030 NM_009558 ENSMUSG00000023892 Zfp51 Zfp-51|zfec12 zinc finger protein 51 protein-coding common_peak2_282_2632_0.0176502833967014_11.3713169477444_0.345673166345038 chr13 45442129 45445473 + 0.345673166345038 NA Intergenic Intergenic 54059 NM_153789 218203 Mm.212855 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|Mir myosin regulatory light chain interacting protein protein-coding common_peak1_216_1896_0.0207143505882996_10.8998611387056_0.345596739477916 chr12 79171798 79173193 + 0.345596739477916 NA promoter-TSS (NM_016800) promoter-TSS (NM_016800) -37 NM_016800 53612 Mm.265929 NM_016800 ENSMUSG00000021124 Vti1b AU015348|GES30|MVti1b|SNARE|Vti1-rp1 vesicle transport through interaction with t-SNAREs 1B protein-coding common_peak1_22_116_0.0680960845101053_6.90441276183846_0.345556090118983 chr7 31032113 31032452 + 0.345556090118983 NA TTS (NM_008761) TTS (NM_008761) 8035 NR_106017 102465635 NR_106017 ENSMUSG00000098783 Mir7050 Gm27578|mmu-mir-7050 microRNA 7050 ncRNA common_peak1_21_123_-0.0943985676929238_6.90699702654041_0.345556090118983 chr7 19824428 19824937 + 0.345556090118983 NA Intergenic PB1D7|SINE|Alu -1927 NM_033601 12051 Mm.439658 NM_033601 ENSMUSG00000053175 Bcl3 AI528691|Bcl-3 B cell leukemia/lymphoma 3 protein-coding common_peak1_21_123_-0.0943985676929238_6.90699702654041_0.345556090118983-2 chr8 121947878 121948352 + 0.345556090118983 NA Intergenic PB1D11|SINE|Alu -2377 NM_016812 53325 Mm.287163 NM_016812 ENSMUSG00000025316 Banp AA408158|SMAR1 BTG3 associated nuclear protein protein-coding unique_peak2_21_123_-0.0943985676929238_6.90699702654041_0.345556090118983 chr2 166108355 166109172 + 0.345556090118983 NA intron (NM_001252579, intron 3 of 20) intron (NM_001252579, intron 3 of 20) 46522 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak1_40_239_0.054552669456907_7.93416693033697_0.345530495807155 chr5 64380456 64380944 + 0.345530495807155 NA Intergenic Intergenic 87242 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA common_peak1_78_542_0.0372907033089547_9.10345373945884_0.345488272536118 chr7 75794156 75795301 + 0.345488272536118 NA Intergenic Intergenic -53610 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak1_17_85_0.0784206071705693_6.46547505828738_0.345455084168709 chr1 187348128 187348712 + 0.345455084168709 NA exon (NM_026367, exon 10 of 10) exon (NM_026367, exon 10 of 10) 132909 NM_026367 67769 Mm.138321 NM_026367 ENSMUSG00000039210 Gpatch2 5830433G22Rik|5830436K05Rik|AI427714|AI447508|AW107440|AW491060|Gpatc2 G patch domain containing 2 protein-coding common_peak1_17_85_0.0784206071705693_6.46547505828738_0.345455084168709-4 chr4 24966251 24966692 + 0.345455084168709 NA Intergenic CpG -6948 NM_030733 81006 Mm.160412 NM_030733 ENSMUSG00000040372 Gpr63 PSP24beta|Psp24-2 G protein-coupled receptor 63 protein-coding unique_peak2_17_85_0.0784206071705693_6.46547505828738_0.345455084168709-2 chr3 88513350 88514021 + 0.345455084168709 NA Intergenic Intergenic -10333 NM_001002011 16905 Mm.243014 NM_019390 ENSMUSG00000028063 Lmna Dhe lamin A protein-coding common_peak2_17_85_0.0784206071705693_6.46547505828738_0.345455084168709 chr17 84271804 84272439 + 0.345455084168709 NA intron (NM_183021, intron 30 of 37) intron (NM_183021, intron 30 of 37) -84174 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_17_85_0.0784206071705693_6.46547505828738_0.345455084168709-5 chr8 81012744 81013144 + 0.345455084168709 NA intron (NM_027554, intron 1 of 9) intron (NM_027554, intron 1 of 9) 1962 NM_027554 74841 Mm.246018 NM_027554 ENSMUSG00000038250 Usp38 4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891 ubiquitin specific peptidase 38 protein-coding common_peak1_17_85_0.0784206071705693_6.46547505828738_0.345455084168709-3 chr13 21506216 21506796 + 0.345455084168709 NA promoter-TSS (NR_026798) promoter-TSS (NR_026798) 18 NR_026798 100038371 Mm.133328 NR_026798 Zfp389 ENSMUSG00000075041|OTTMUSG00000018077 zinc finger protein 389 pseudo common_peak1_17_85_0.0784206071705693_6.46547505828738_0.345455084168709-2 chr11 48801179 48801625 + 0.345455084168709 NA promoter-TSS (NR_028563) promoter-TSS (NR_028563) -631 NR_028563 100216534 NR_028563 ENSMUSG00000064725 Snord96a U96 small nucleolar RNA, C/D box 96A snoRNA unique_peak2_17_85_0.0784206071705693_6.46547505828738_0.345455084168709 chr14 67802326 67802903 + 0.345455084168709 NA intron (NM_177780, intron 26 of 51) B1_Mur1|SINE|Alu 57131 NR_105857 102465310 NR_105857 ENSMUSG00000098866 Mir6539 Gm27464|mir-6539|mmu-mir-6539 microRNA 6539 ncRNA common_peak1_16_91_-0.120025695082841_6.46354910851559_0.345455084168684 chr11 97664796 97665207 + 0.345455084168684 NA exon (NM_139311, exon 2 of 20) exon (NM_139311, exon 2 of 20) 1589 NM_139311 246198 Mm.23685 NM_139311 ENSMUSG00000038437 Mllt6 AI315037|Af17 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6 protein-coding unique_peak2_16_91_-0.120025695082841_6.46354910851559_0.345455084168684 chr15 6552696 6553521 + 0.345455084168684 NA Intergenic Intergenic -26739 NM_001278269 23880 Mm.170905 NM_011815 ENSMUSG00000022148 Fyb ADAP|B630013F22Rik|FYB-120/130|Slap130|p120/130|p120/p130 FYN binding protein protein-coding common_peak1_16_91_-0.120025695082841_6.46354910851559_0.345455084168684-2 chr7 58721607 58722091 + 0.345455084168684 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 63647 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_16_91_-0.120025695082841_6.46354910851559_0.345455084168684-3 chr9 72678507 72678962 + 0.345455084168684 NA intron (NM_010890, intron 5 of 28) intron (NM_010890, intron 5 of 28) 16387 NM_010890 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|Nedd4-1|Nedd4a|mKIAA0093 neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak2_85_634_-0.0382733002192239_9.29147613154992_0.345431918112983 chr6 124755644 124757478 + 0.345431918112983 NA promoter-TSS (NM_007881) promoter-TSS (NM_007881) -74 NM_007881 13498 Mm.333380 NM_007881 ENSMUSG00000004263 Atn1 Atr1|Drpla|atrophin-1 atrophin 1 protein-coding common_peak1_85_634_-0.0382733002192239_9.29147613154992_0.345431918112983 chr6 129749007 129750455 + 0.345431918112983 NA Intergenic MT2C_Mm|LTR|ERVL -9247 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak1_192_1641_0.0215668806684537_10.692021852112_0.345405160800753 chr12 21372658 21374439 + 0.345405160800753 NA promoter-TSS (NM_001291871) promoter-TSS (NM_001291871) 84 NR_102380 11491 Mm.27681 NM_009615 ENSMUSG00000052593 Adam17 CD156b|Tace a disintegrin and metallopeptidase domain 17 protein-coding common_peak1_94_716_-0.0373595184266922_9.46714954948856_0.345381276515412 chr1 175880292 175881129 + 0.345381276515412 NA promoter-TSS (NM_012012) promoter-TSS (NM_012012) -68 NM_012012 26909 Mm.283046 NM_012012 ENSMUSG00000039748 Exo1 5730442G03Rik|Msa exonuclease 1 protein-coding common_peak1_96_700_0.0320677293527858_9.46930449868702_0.34531867466618 chr4 93334769 93335903 + 0.34531867466618 NA exon (NM_026954, exon 1 of 1) exon (NM_026954, exon 1 of 1) 175 NM_026954 69136 Mm.171558 NM_026954 ENSMUSG00000054000 Tusc1 2200001D17Rik|TSG-9 tumor suppressor candidate 1 protein-coding common_peak2_313_2993_0.0162294395335909_11.5559732258252_0.345209844240679 chr17 6826509 6829393 + 0.345209844240679 NA Intergenic CpG -45171 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding common_peak2_62_409_0.0421290604463369_8.70054462972861_0.345192908665352 chr14 103032956 103034486 + 0.345192908665352 NA promoter-TSS (NR_045657) promoter-TSS (NR_045657) 82 NR_045657 71264 Mm.399572 NR_045657 4933432I03Rik - RIKEN cDNA 4933432I03 gene ncRNA common_peak1_70_475_0.0383417825390744_8.91398865457748_0.345181816675158 chr7 130865780 130866796 + 0.345181816675158 NA intron (NM_133942, intron 1 of 9) CpG 378 NM_133942 101476 Mm.323554 NM_133942 ENSMUSG00000040268 Plekha1 AA960558|C920009D07Rik|TAPP1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 protein-coding common_peak2_299_2829_0.0167879929431365_11.4749803341908_0.345131138203827 chr5 93091845 93096128 + 0.345131138203827 NA intron (NM_001310669, intron 1 of 10) CpG 570 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak2_106_790_0.0314365348829817_9.64325215191428_0.345058277220183 chr9 118505669 118507539 + 0.345058277220183 NA intron (NM_018748, intron 1 of 23) CpG 286 NM_018748 54214 Mm.10409 NM_018748 ENSMUSG00000038708 Golga4 AI225887|AU019508|Olp-1 golgi autoantigen, golgin subfamily a, 4 protein-coding common_peak2_145_1206_-0.0282786231830361_10.2230706491635_0.345005204405799 chr8 41239012 41240809 + 0.345005204405799 NA 5' UTR (NM_023662, exon 1 of 38) 5' UTR (NM_023662, exon 1 of 38) 151 NM_023662 18536 Mm.117896 NM_023662 ENSMUSG00000031592 Pcm1 2600002H09Rik|9430077F19Rik|C030044G17Rik pericentriolar material 1 protein-coding common_peak1_39_252_-0.065247035877178_7.95037005675572_0.344989929602579-2 chr9 65884557 65885202 + 0.344989929602579 NA intron (NM_019797, intron 4 of 15) intron (NM_019797, intron 4 of 15) 294 NM_001170907 56404 Mm.208379 NM_019797 ENSMUSG00000032386 Trip4 4930558E03Rik|ASC-1|Asc1|BB191711 thyroid hormone receptor interactor 4 protein-coding common_peak1_39_252_-0.065247035877178_7.95037005675572_0.344989929602579-3 chrX 77801745 77802594 + 0.344989929602579 NA Intergenic B1_Mus1|SINE|Alu -6209 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding common_peak1_39_252_-0.065247035877178_7.95037005675572_0.344989929602579 chr1 182369195 182369875 + 0.344989929602579 NA Intergenic Intergenic -27929 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_34_196_0.0593938950671573_7.65174876698996_0.344896338526202-2 chr4 101173473 101174284 + 0.344896338526202 NA intron (NM_146145, intron 10 of 24) G-rich|Low_complexity|Low_complexity 91404 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding unique_peak2_34_196_0.0593938950671573_7.65174876698996_0.344896338526202 chr16 91470125 91471296 + 0.344896338526202 NA TTS (NR_077219) TTS (NR_077219) 5606 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak1_34_196_0.0593938950671573_7.65174876698996_0.344896338526202 chr14 70287017 70287585 + 0.344896338526202 NA intron (NM_001304992, intron 1 of 12) B1_Mur4|SINE|Alu 2196 NM_008915 19057 Mm.439683 NM_008915 ENSMUSG00000022092 Ppp3cc Calnc|PP2BA gamma protein phosphatase 3, catalytic subunit, gamma isoform protein-coding common_peak2_86_643_-0.0381190474487649_9.31185735439023_0.344802565989059-2 chr13 38527330 38528898 + 0.344802565989059 NA promoter-TSS (NM_001289599) promoter-TSS (NM_001289599) -200 NM_001289599 105245 Mm.28622 NM_145367 ENSMUSG00000038991 Txndc5 AL022641|ERp46|PC-TRP thioredoxin domain containing 5 protein-coding common_peak2_86_643_-0.0381190474487649_9.31185735439023_0.344802565989059 chr1 91085147 91087459 + 0.344802565989059 NA intron (NM_008515, intron 7 of 22) intron (NM_008515, intron 7 of 22) 32859 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_97_709_0.0318133337049957_9.48758188124454_0.344763111072874 chr11 98681481 98683445 + 0.344763111072874 NA promoter-TSS (NM_009439) promoter-TSS (NM_009439) -91 NM_009439 22123 Mm.12194 NM_009439 ENSMUSG00000017221 Psmd3 AI255837|AntP91a|D11Bwg1349e|Psd3|Tstap91a proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 protein-coding common_peak1_28_155_0.0632610956503195_7.31703276668741_0.344737196000724 chr9 45828190 45828720 + 0.344737196000724 NA intron (NM_001081373, intron 1 of 29) CpG 183 NM_001081373 214552 Mm.260103 NM_172531 ENSMUSG00000043987 Cep164 AI450905|BC027092|D030051D21|mKIAA1052 centrosomal protein 164 protein-coding common_peak2_28_155_0.0632610956503195_7.31703276668741_0.344737196000724 chr11 107438178 107439498 + 0.344737196000724 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 31882 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding unique_peak2_28_155_0.0632610956503195_7.31703276668741_0.344737196000724 chr11 103217221 103218496 + 0.344737196000724 NA intron (NM_177801, intron 1 of 4) (CACCG)n|Simple_repeat|Simple_repeat 574 NM_177801 328019 Mm.189646 NM_177801 ENSMUSG00000044787 Spata32 4933400C05Rik|VAD1.2 spermatogenesis associated 32 protein-coding unique_peak2_28_155_0.0632610956503195_7.31703276668741_0.344737196000724-2 chr19 46758715 46759859 + 0.344737196000724 NA Intergenic Intergenic -2322 NM_033569 94219 Mm.306903 NM_033569 ENSMUSG00000064105 Cnnm2 AU015877|AW048635|Acdp2|Clp2 cyclin M2 protein-coding common_peak1_69_494_-0.0432266892570823_8.92967137033843_0.344728481173495 chr12 40426855 40428266 + 0.344728481173495 NA intron (NM_172575, intron 1 of 12) intron (NM_172575, intron 1 of 12) 18230 NM_172575 246196 Mm.26852 NM_172575 ENSMUSG00000055917 Zfp277 2410017E24Rik|NIRF4 zinc finger protein 277 protein-coding common_peak2_69_494_-0.0432266892570823_8.92967137033843_0.344728481173495 chr7 127375295 127376596 + 0.344728481173495 NA 5' UTR (NM_175560, exon 1 of 3) 5' UTR (NM_175560, exon 1 of 3) 105 NM_175560 269997 Mm.221270 NM_175560 ENSMUSG00000054381 Zfp747 6430604K15Rik zinc finger protein 747 protein-coding common_peak2_180_1566_-0.0245821489962186_10.6014983899745_0.344711518066529 chr6 8638743 8643589 + 0.344711518066529 NA intron (NM_001252266, intron 11 of 11) intron (NM_001252266, intron 11 of 11) 117292 NM_001252266 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 protein-coding common_peak1_146_1216_-0.0281026996497609_10.2350621028888_0.344640254732788 chr17 15040808 15042024 + 0.344640254732788 NA promoter-TSS (NM_001039552) promoter-TSS (NM_001039552) 143 NM_001123368 100041586 Mm.440445 NM_001123368 ENSMUSG00000079710 Gm3417 - predicted gene 3417 protein-coding common_peak1_55_353_0.0455715111212847_8.49039130564364_0.344582444945653 chr6 37463447 37464209 + 0.344582444945653 NA Intergenic Intergenic -21680 NM_178661 208647 Mm.169929 NM_178661 ENSMUSG00000038648 Creb3l2 BBF2H7|C530025K05Rik|SCIRR69 cAMP responsive element binding protein 3-like 2 protein-coding common_peak2_55_353_0.0455715111212847_8.49039130564364_0.344582444945653 chr10 78085984 78087817 + 0.344582444945653 NA Intergenic Intergenic 17532 NM_015790 50723 Mm.17819 NM_015790 ENSMUSG00000000732 Icosl AU044799|B7-H2|B7RP-1|B7h|BG071784|GI50|GL50|GL50-B|ICOS-L|Icoslg|LICOS|Ly115l|mKIAA0653 icos ligand protein-coding common_peak1_33_207_-0.0702911459805646_7.66529414515081_0.34446301900072-2 chr8 31111164 31111744 + 0.34446301900072 NA promoter-TSS (NM_175136) promoter-TSS (NM_175136) -392 NM_175136 68867 Mm.29532 NM_175136 ENSMUSG00000039328 Rnf122 1110063C11Rik ring finger protein 122 protein-coding common_peak1_33_207_-0.0702911459805646_7.66529414515081_0.34446301900072 chr17 33393950 33394646 + 0.34446301900072 NA intron (NM_009542, intron 1 of 3) intron (NM_009542, intron 1 of 3) 339 NM_009542 22643 Mm.4417 NM_009542 ENSMUSG00000055240 Zfp101 AI316498|AI325003 zinc finger protein 101 protein-coding common_peak2_71_483_0.0390467469707847_8.93838661075999_0.344460921166941 chr2 84677386 84679022 + 0.344460921166941 NA promoter-TSS (NM_025885) promoter-TSS (NM_025885) -30 NM_001290751 66958 Mm.371621 NM_025868 ENSMUSG00000050043 Tmx2 2310042M24Rik|AA589631|Txndc14 thioredoxin-related transmembrane protein 2 protein-coding common_peak1_63_417_0.0421187534169967_8.72841850878938_0.344358596225987-2 chr14 36961530 36962567 + 0.344358596225987 NA intron (NM_027045, intron 1 of 10) intron (NM_027045, intron 1 of 10) 6716 NM_027045 72972 Mm.27621 NM_027045 ENSMUSG00000058690 Ccser2 1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14 coiled-coil serine rich 2 protein-coding common_peak1_63_417_0.0421187534169967_8.72841850878938_0.344358596225987 chr14 20787880 20789198 + 0.344358596225987 NA intron (NM_178597, intron 2 of 20) intron (NM_178597, intron 2 of 20) 5549 NM_001039138 12325 Mm.235182 NM_178597 ENSMUSG00000021820 Camk2g Camkg calcium/calmodulin-dependent protein kinase II gamma protein-coding common_peak2_98_718_0.0316065033748671_9.50565121212673_0.344221313258412 chr6 47762858 47764606 + 0.344221313258412 NA Intergenic CpG -10807 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak2_48_299_0.0480575464148032_8.25284746370328_0.344176539236492 chr12 86078553 86079801 + 0.344176539236492 NA promoter-TSS (NM_009368) promoter-TSS (NM_009368) -136 NM_009368 21809 Mm.3992 NM_009368 ENSMUSG00000021253 Tgfb3 TGF-beta-3|Tgfb-3 transforming growth factor, beta 3 protein-coding common_peak2_128_997_0.0269656810699725_9.97637884587225_0.344158259829063 chr17 74489011 74490463 + 0.344158259829063 NA exon (NM_026417, exon 1 of 6) exon (NM_026417, exon 1 of 6) 244 NM_026417 67864 Mm.41891 NM_026417 ENSMUSG00000024072 Yipf4 2310034L04Rik Yip1 domain family, member 4 protein-coding common_peak1_128_997_0.0269656810699725_9.97637884587225_0.344158259829063 chr15 80008561 80010831 + 0.344158259829063 NA intron (NM_011057, intron 1 of 6) intron (NM_011057, intron 1 of 6) 5112 NM_011057 18591 Mm.144089 NM_011057 ENSMUSG00000000489 Pdgfb PDGF-B|Sis platelet derived growth factor, B polypeptide protein-coding common_peak1_41_247_0.0498906445979799_7.97914163268586_0.344117593045804 chr5 100466909 100467587 + 0.344117593045804 NA intron (NM_172714, intron 4 of 12) intron (NM_172714, intron 4 of 12) 31325 NM_001115010 231506 Mm.212568 NM_172714 ENSMUSG00000035310 Lin54 AI461788 lin-54 homolog (C. elegans) protein-coding common_peak1_89_638_0.0331188278039924_9.33623153484899_0.34405717418778 chr12 24498201 24499384 + 0.34405717418778 NA intron (NM_020614, intron 1 of 14) CpG 211 NR_028341 21340 Mm.39082 NM_020614 ENSMUSG00000059669 Taf1b 4930408G01Rik|A230108M10Rik|TAFI68|Tafi86|p63 TATA-box binding protein associated factor, RNA polymerase I, B protein-coding common_peak2_89_638_0.0331188278039924_9.33623153484899_0.34405717418778 chr11 61407670 61409041 + 0.34405717418778 NA Intergenic CpG -30280 NM_026183 67473 Mm.100741 NM_026183 ENSMUSG00000010122 Slc47a1 1300013J15Rik|AI036982|MATE1|mMATE1 solute carrier family 47, member 1 protein-coding common_peak1_118_902_0.0284901927587864_9.83282727386025_0.344031407209111 chr11 53430089 53431094 + 0.344031407209111 NA exon (NM_025352, exon 1 of 2) exon (NM_025352, exon 1 of 2) 240 NM_025352 22272 Mm.251621 NM_025352 ENSMUSG00000044894 Uqcrq 1100001F06Rik|1500040F11Rik|5830407L17Rik|9.5kDa|AA959903|QP-C|Qpc|Uqcrb|c1502 ubiquinol-cytochrome c reductase, complex III subunit VII protein-coding unique_peak2_12_66_-0.137280257003195_5.99744906195617_0.343786565003198-2 chr2 165888394 165888963 + 0.343786565003198 NA Intergenic Intergenic -3840 NM_001252587 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak2_12_66_-0.137280257003195_5.99744906195617_0.343786565003198 chr12 52097664 52098126 + 0.343786565003198 NA intron (NM_029760, intron 1 of 10) CpG 149 NM_029760 76826 Mm.244781 NM_029760 ENSMUSG00000035142 Nubpl 2410170E07Rik nucleotide binding protein-like protein-coding common_peak1_12_66_-0.137280257003195_5.99744906195617_0.343786565003198 chr11 119393504 119393774 + 0.343786565003198 NA Intergenic MLTR14|LTR|ERV1 3167 NR_035453 100316690 NR_035453 ENSMUSG00000088015 Mir1932 mir-1932|mmu-mir-1932 microRNA 1932 ncRNA common_peak2_162_1332_0.0233833788323974_10.3921527545052_0.343781128246555 chr8 71675394 71678326 + 0.343781128246555 NA intron (NM_010589, intron 1 of 24) B1F1|SINE|Alu 477 NM_010589 16453 Mm.249645 NM_010589 ENSMUSG00000031805 Jak3 fae|wil Janus kinase 3 protein-coding common_peak1_127_1027_-0.0295343525096428_9.99085737293906_0.343734172699229-2 chr6 31517786 31519303 + 0.343734172699229 NA TTS (NM_013723) TTS (NM_013723) 45393 NM_013723 27205 Mm.89918 NM_013723 ENSMUSG00000025608 Podxl AW121214|Ly102|PC|PCLP-1|Pclp1 podocalyxin-like protein-coding common_peak1_127_1027_-0.0295343525096428_9.99085737293906_0.343734172699229 chr11 53844717 53846605 + 0.343734172699229 NA intron (NR_033332, intron 2 of 3) intron (NR_033332, intron 2 of 3) 13595 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA common_peak1_56_361_0.0446528324669675_8.52217230331669_0.343632987213757 chr17 33089049 33089741 + 0.343632987213757 NA promoter-TSS (NM_001024950) promoter-TSS (NM_001024950) 28 NM_001024950 240068 Mm.121392 NM_001024950 ENSMUSG00000067424 Zfp563 D10628|D130054H01|NTfin7|Zfp413 zinc finger protein 563 protein-coding common_peak1_56_361_0.0446528324669675_8.52217230331669_0.343632987213757-2 chr3 35764911 35765806 + 0.343632987213757 NA intron (NM_029570, intron 1 of 29) intron (NM_029570, intron 1 of 29) 11220 NM_029570 76295 Mm.239416 NM_029570 ENSMUSG00000037400 Atp11b 1110019I14Rik|ATPIF|ATPIR|mKIAA0956 ATPase, class VI, type 11B protein-coding common_peak1_555_6152_-0.0118648740356946_12.5811418401832_0.343573603554781 chr14 60734905 60739208 + 0.343573603554781 NA intron (NM_001310594, intron 1 of 9) MIRc|SINE|MIR 4152 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak1_81_568_0.0357707339452009_9.17017020927918_0.343479615379944 chr9 44396964 44397788 + 0.343479615379944 NA promoter-TSS (NM_008063) promoter-TSS (NM_008063) 281 NM_001293630 14385 Mm.30087 NM_008063 ENSMUSG00000032114 Slc37a4 100043178|G6PT|G6pt1|GSD-1b|mG6PT solute carrier family 37 (glucose-6-phosphate transporter), member 4 protein-coding common_peak1_64_426_0.038822260712406_8.75750338997669_0.343456891993444 chr15 77698863 77699851 + 0.343456891993444 NA intron (NM_001134802, intron 1 of 4) intron (NM_001134802, intron 1 of 4) 468 NM_001134802 666348 Mm.303207 NM_001134802 ENSMUSG00000071716 Apol7e ENSMUSG00000071716 apolipoprotein L 7e protein-coding common_peak1_23_122_0.0712609627528549_6.97814498671567_0.343426786505083 chr12 112976352 112976951 + 0.343426786505083 NA promoter-TSS (NM_201646) promoter-TSS (NM_201646) 88 NM_201646 399566 Mm.440140 NM_201646 ENSMUSG00000002803 Btbd6 - BTB (POZ) domain containing 6 protein-coding common_peak1_23_122_0.0712609627528549_6.97814498671567_0.343426786505083-2 chr8 88636265 88636730 + 0.343426786505083 NA promoter-TSS (NM_027840) promoter-TSS (NM_027840) -369 NM_027840 71607 Mm.270607 NM_027840 ENSMUSG00000031662 Snx20 9130017C17Rik sorting nexin 20 protein-coding common_peak1_35_203_0.0588723310875281_7.70186150751526_0.34341627397537-2 chr17 63864019 63864554 + 0.34341627397537 NA intron (NM_001037997, intron 1 of 18) CpG 305 NM_001037997 14158 Mm.23039 NM_008000 ENSMUSG00000000127 Fer AV082135|C330004K01Rik|Fert|Fert2 fer (fms/fps related) protein kinase protein-coding common_peak1_35_203_0.0588723310875281_7.70186150751526_0.34341627397537 chr16 20548649 20549093 + 0.34341627397537 NA promoter-TSS (NR_030670) promoter-TSS (NR_030670) 268 NM_013852 27406 Mm.27135 NM_013852 ENSMUSG00000003234 Abcf3 AI326318|AU016058|BB119416 ATP-binding cassette, sub-family F (GCN20), member 3 protein-coding common_peak1_35_203_0.0588723310875281_7.70186150751526_0.34341627397537-3 chr4 88094583 88095224 + 0.34341627397537 NA intron (NM_001081184, intron 1 of 43) CpG 273 NM_001081184 230393 Mm.287210 NM_001081184 ENSMUSG00000038368 Focad - focadhesin protein-coding common_peak2_175_1464_0.0229497269434091_10.5281598127813_0.343400655798227 chr13 32979821 32984125 + 0.343400655798227 NA Intergenic Intergenic 16460 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak2_71_511_-0.0420900157546207_8.97895499212269_0.343254427878674 chr11 101069220 101070723 + 0.343254427878674 NA promoter-TSS (NM_013792) promoter-TSS (NM_013792) -123 NM_013792 27419 Mm.95452 NM_013792 ENSMUSG00000001751 Naglu - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) protein-coding common_peak2_322_3170_-0.0166257161125198_11.6224093040476_0.343219803175912 chr5 114377001 114381665 + 0.343219803175912 NA intron (NM_026145, intron 1 of 6) intron (NM_026145, intron 1 of 6) 1172 NM_026145 330171 Mm.238285 NM_026145 ENSMUSG00000001098 Kctd10 AW536343|C87062|mBACURD3 potassium channel tetramerisation domain containing 10 protein-coding common_peak2_55_377_-0.0490653630167905_8.53770974271268_0.343173615497102 chrX 13241707 13243523 + 0.343173615497102 NA intron (NR_045429, intron 1 of 2) intron (NR_045429, intron 1 of 2) 5118 NR_045429 72122 Mm.75434 NR_045429 ENSMUSG00000100714 2010308F09Rik - RIKEN cDNA 2010308F09 gene ncRNA common_peak1_13_62_0.0826725153316534_6.01861618116574_0.343123337561527 chr15 102097263 102097719 + 0.343123337561527 NA TTS (NM_145625) TTS (NM_145625) -5497 NM_153533 209039 Mm.29389 NM_153533 ENSMUSG00000037003 Tns2 C1-ten|Tenc1|nep|nph tensin 2 protein-coding unique_peak2_13_62_0.0826725153316534_6.01861618116574_0.343123337561527 chr1 54585719 54586324 + 0.343123337561527 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -28337 NM_001163314 241062 Mm.103539 NM_175508 ENSMUSG00000073678 Pgap1 5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto post-GPI attachment to proteins 1 protein-coding common_peak1_13_62_0.0826725153316534_6.01861618116574_0.343123337561527-2 chr2 59053216 59053623 + 0.343123337561527 NA Intergenic Intergenic -34813 NM_001001178 227933 Mm.330234 NM_177650 ENSMUSG00000036641 Ccdc148 5830402J09 coiled-coil domain containing 148 protein-coding common_peak1_237_2184_-0.0197328829619625_11.083551122907_0.343118538941009 chr19 8990906 8993800 + 0.343118538941009 NA intron (NM_009643, intron 1 of 4) intron (NM_009643, intron 1 of 4) 3069 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_22_130_-0.0949621974439401_6.98594190281548_0.343091548103993-3 chr14 71113840 71114376 + 0.343091548103993 NA Intergenic Lx9|LINE|L1 -137165 NR_046075 100043132 Mm.399336 NR_046075 Gm4251 - predicted gene 4251 ncRNA unique_peak2_22_130_-0.0949621974439401_6.98594190281548_0.343091548103993 chr5 36978912 36980129 + 0.343091548103993 NA intron (NM_011716, intron 2 of 7) intron (NM_011716, intron 2 of 7) 9462 NM_011716 22393 Mm.20916 NM_011716 ENSMUSG00000039474 Wfs1 AI481085|wolframin Wolfram syndrome 1 homolog (human) protein-coding common_peak1_22_130_-0.0949621974439401_6.98594190281548_0.343091548103993-2 chr12 40248189 40248723 + 0.343091548103993 NA Intergenic Intergenic 25092 NR_045157 629820 Mm.435540 NR_045157 ENSMUSG00000035983 Gm7008 EG629820 predicted gene 7008 ncRNA common_peak1_22_130_-0.0949621974439401_6.98594190281548_0.343091548103993 chr10 67643745 67644160 + 0.343091548103993 NA Intergenic Intergenic -94997 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak2_49_307_0.0458409626278389_8.28970702200882_0.343071872150961 chr4 103313594 103314611 + 0.343071872150961 NA intron (NM_025909, intron 1 of 8) CpG 256 NM_025909 67013 Mm.30021 NM_025909 ENSMUSG00000035069 Oma1 2010001O09Rik|MPRP-1|ZMPOMA1 OMA1 zinc metallopeptidase protein-coding common_peak1_63_443_-0.0449379808522252_8.77194687592399_0.343068071398984 chr13 93786717 93787884 + 0.343068071398984 NA intron (NM_009712, intron 1 of 7) intron (NM_009712, intron 1 of 7) -3477 NR_049198 100885837 NR_049198 ENSMUSG00000093480 Mir5624 Gm25075|mir-5624|mmu-mir-5624 microRNA 5624 ncRNA common_peak1_34_214_-0.0667471350659268_7.7148192820565_0.343011569150849-2 chr17 66017099 66017714 + 0.343011569150849 NA intron (NM_001025572, intron 8 of 12) MMVL30-int|LTR|ERV1 59640 NM_001025572 106585 Mm.34706 NM_001025572 ENSMUSG00000034647 Ankrd12 2900001A12Rik|AI447928|ANCO-2|AV347965|GAC-1|mKIAA0874 ankyrin repeat domain 12 protein-coding common_peak1_34_214_-0.0667471350659268_7.7148192820565_0.343011569150849-3 chr7 25681573 25682177 + 0.343011569150849 NA intron (NM_172148, intron 1 of 2) L2a|LINE|L2 717 NM_172148 232987 Mm.22849 NM_172148 ENSMUSG00000063439 B9d2 stumpy B9 protein domain 2 protein-coding common_peak1_34_214_-0.0667471350659268_7.7148192820565_0.343011569150849 chr1 64738465 64739144 + 0.343011569150849 NA Intergenic Intergenic -1054 NM_022721 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_73_500_0.0377291692025583_8.98753137779649_0.343004563242348 chr16 17890785 17891782 + 0.343004563242348 NA intron (NM_010048, intron 1 of 9) CpG 445 NM_010048 13356 Mm.254515 NM_010048 ENSMUSG00000003166 Dgcr2 9930034O06Rik|DGS-C|Dgsc|Idd|Lan|Sez12|mKIAA0163 DiGeorge syndrome critical region gene 2 protein-coding common_peak2_42_254_0.051373733395093_8.0200403035564_0.342952916675262-2 chr5 111892745 111894194 + 0.342952916675262 NA Intergenic Intergenic -131741 NR_045833 269683 Mm.136946 NM_207252 ENSMUSG00000085271 E130006D01Rik Gm16018|Gm681|OTTMUSG00000029083 RIKEN cDNA E130006D01 gene ncRNA common_peak2_42_254_0.051373733395093_8.0200403035564_0.342952916675262 chr5 32784988 32786245 + 0.342952916675262 NA promoter-TSS (NM_177298) promoter-TSS (NM_177298) 10 NM_177298 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase protein-coding common_peak1_29_162_0.059928278366626_7.37869229341439_0.342893756578536-2 chr9 32719987 32720643 + 0.342893756578536 NA intron (NM_011808, intron 1 of 7) intron (NM_011808, intron 1 of 7) 24273 NM_001038642 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_29_162_0.059928278366626_7.37869229341439_0.342893756578536 chr10 6956552 6957118 + 0.342893756578536 NA intron (NM_001033391, intron 2 of 7) intron (NM_001033391, intron 2 of 7) 23630 NM_001170800 320495 Mm.331674 NM_001033391 ENSMUSG00000064065 Ipcef1 A130090K04Rik interaction protein for cytohesin exchange factors 1 protein-coding common_peak2_91_656_0.0319358661438933_9.37571749339428_0.342890717540635 chr10 81642837 81644356 + 0.342890717540635 NA exon (NM_027480, exon 17 of 20) exon (NM_027480, exon 17 of 20) -5473 NM_001142963 100233208 Mm.327168 NM_001142963 ENSMUSG00000096856 Gm10778 ENSMUSG00000074860 predicted gene 10778 protein-coding common_peak1_177_1485_0.0224122794119488_10.5484245402446_0.342806264977403 chr4 132747065 132748824 + 0.342806264977403 NA intron (NM_133888, intron 1 of 7) intron (NM_133888, intron 1 of 7) 9227 NM_133888 100340 Mm.287187 NM_133888 ENSMUSG00000028885 Smpdl3b 1110054A24Rik|AU045240|Asml3b sphingomyelin phosphodiesterase, acid-like 3B protein-coding common_peak1_567_6216_0.0109936158686388_12.6074996714718_0.342803240178147 chr3 105891950 105896404 + 0.342803240178147 NA intron (NM_027025, intron 1 of 6) intron (NM_027025, intron 1 of 6) -10244 NM_009631 11542 Mm.235024 NM_009631 ENSMUSG00000000562 Adora3 A3AR|A3R|AA3R|ARA3|Gpcr2 adenosine A3 receptor protein-coding common_peak1_228_2028_0.0189147450015135_10.9960105222574_0.342715786713059 chr5 86804106 86805233 + 0.342715786713059 NA intron (NM_177680, intron 1 of 16) CpG 179 NM_177680 231386 Mm.196325 NM_177680 ENSMUSG00000035851 Ythdc1 A730098D12Rik|C80342|mKIAA1966 YTH domain containing 1 protein-coding common_peak2_109_854_-0.0318772802009892_9.72384196967277_0.342661378111849 chr14 67071176 67072981 + 0.342661378111849 NA intron (NM_001205188, intron 1 of 9) CpG 393 NM_028032 71978 Mm.273997 NM_028032 ENSMUSG00000022052 Ppp2r2a 2410004D02Rik|mKIAA1541 protein phosphatase 2, regulatory subunit B, alpha protein-coding unique_peak2_28_171_-0.0776014401895297_7.38746403460733_0.342643027274497 chr19 24173582 24174728 + 0.342643027274497 NA promoter-TSS (NM_001198985) promoter-TSS (NM_001198985) -15 NM_001198985 21873 Mm.104744 NM_011597 ENSMUSG00000024812 Tjp2 ZO-2 tight junction protein 2 protein-coding common_peak2_28_171_-0.0776014401895297_7.38746403460733_0.342643027274497 chr15 57912149 57912885 + 0.342643027274497 NA intron (NM_001167679, intron 1 of 17) intron (NM_001167679, intron 1 of 17) 318 NM_001167679 210544 Mm.390835 NM_199300 ENSMUSG00000022364 Tbc1d31 4B3|D330013L20Rik|Gm85|Wdr67 TBC1 domain family, member 31 protein-coding common_peak1_28_171_-0.0776014401895297_7.38746403460733_0.342643027274497 chr13 108289025 108289524 + 0.342643027274497 NA Intergenic MER46C|DNA|TcMar-Tigger -27063 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak1_28_171_-0.0776014401895297_7.38746403460733_0.342643027274497-2 chr3 108085324 108086052 + 0.342643027274497 NA promoter-TSS (NM_001289720) promoter-TSS (NM_001289720) -262 NM_001289720 109674 Mm.274335 NM_028779 ENSMUSG00000027889 Ampd2 1200014F01Rik|AI552571|Ampd-2|m4521Dajl adenosine monophosphate deaminase 2 protein-coding common_peak2_17_97_-0.110024482242541_6.55969760299394_0.342618443965869-2 chr13 52976282 52977048 + 0.342618443965869 NA intron (NM_017373, intron 1 of 1) intron (NM_017373, intron 1 of 1) 4374 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_18_91_0.0768022473398773_6.56196307972695_0.342618443965869-5 chr6 6955412 6955970 + 0.342618443965869 NA promoter-TSS (NM_001077713) promoter-TSS (NM_001077713) -327 NM_001077713 71238 Mm.389086 NM_001077713 ENSMUSG00000042505 Sdhaf3 0610005M07Rik|4933430A16Rik|Acn9 succinate dehydrogenase complex assembly factor 3 protein-coding unique_peak2_17_97_-0.110024482242541_6.55969760299394_0.342618443965869-2 chr6 40818273 40819021 + 0.342618443965869 NA intron (NR_035473, intron 2 of 3) intron (NR_035473, intron 2 of 3) 68847 NM_139296 194357 Mm.207087 NM_139296 ENSMUSG00000029885 Moxd2 Dbhl1 monooxygenase, DBH-like 2 protein-coding common_peak1_18_91_0.0768022473398773_6.56196307972695_0.342618443965869-4 chr18 67288638 67289048 + 0.342618443965869 NA promoter-TSS (NM_053261) promoter-TSS (NM_053261) -380 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak1_18_91_0.0768022473398773_6.56196307972695_0.342618443965869-8 chrX 20425489 20426059 + 0.342618443965869 NA promoter-TSS (NM_199317) promoter-TSS (NM_199317) 86 NM_001289684 382207 Mm.281517 NM_199317 ENSMUSG00000037315 Jade3 5730598B06|AI851988|AW544806|Phf16|mKIAA0215 jade family PHD finger 3 protein-coding common_peak1_18_91_0.0768022473398773_6.56196307972695_0.342618443965869-3 chr10 19176048 19176478 + 0.342618443965869 NA intron (NR_038022, intron 1 of 1) (GGAA)n|Simple_repeat|Simple_repeat 9025 NR_038022 100504265 Mm.383417 NR_038021 Gm20139 - predicted gene, 20139 ncRNA common_peak1_18_91_0.0768022473398773_6.56196307972695_0.342618443965869-6 chr6 125088739 125089115 + 0.342618443965869 NA Intergenic Intergenic -7236 NM_145979 107932 Mm.333388 NM_145979 ENSMUSG00000063870 Chd4 9530019N15Rik|AA617397|BC005710|D6Ertd380e|Mi-2beta|mKIAA4075 chromodomain helicase DNA binding protein 4 protein-coding unique_peak2_17_97_-0.110024482242541_6.55969760299394_0.342618443965869 chr4 41310876 41311899 + 0.342618443965869 NA intron (NM_026893, intron 2 of 8) intron (NM_026893, intron 2 of 8) 3514 NM_026893 68970 Mm.28891 NM_026893 ENSMUSG00000028436 Dcaf12 1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a DDB1 and CUL4 associated factor 12 protein-coding common_peak1_18_91_0.0768022473398773_6.56196307972695_0.342618443965869-2 chr1 156459823 156460267 + 0.342618443965869 NA intron (NM_009230, intron 2 of 15) intron (NM_009230, intron 2 of 15) 14283 NM_009230 20652 Mm.28099 NM_009230 ENSMUSG00000026600 Soat1 8430426K15Rik|ACAT-1|AW550831|Acact|ald|hid sterol O-acyltransferase 1 protein-coding unique_peak2_18_91_0.0768022473398773_6.56196307972695_0.342618443965869 chr3 131302422 131303210 + 0.342618443965869 NA exon (NM_027816, exon 1 of 5) exon (NM_027816, exon 1 of 5) 411 NM_027816 71519 Mm.473179 NM_027816 ENSMUSG00000027983 Cyp2u1 8430436A10Rik cytochrome P450, family 2, subfamily u, polypeptide 1 protein-coding common_peak2_17_97_-0.110024482242541_6.55969760299394_0.342618443965869 chr1 39367123 39367773 + 0.342618443965869 NA promoter-TSS (NM_001252219) promoter-TSS (NM_001252219) -403 NM_053257 114641 Mm.379302 NM_053257 ENSMUSG00000073702 Rpl31 Dts ribosomal protein L31 protein-coding common_peak1_18_91_0.0768022473398773_6.56196307972695_0.342618443965869 chr1 84840201 84840648 + 0.342618443965869 NA intron (NM_025386, intron 1 of 3) intron (NM_025386, intron 1 of 3) 583 NM_025386 66153 Mm.381192 NM_025386 ENSMUSG00000073633 Fbxo36 0610008D19Rik|1110020F21Rik|2410002G19Rik|D1Ertd757e F-box protein 36 protein-coding common_peak1_18_91_0.0768022473398773_6.56196307972695_0.342618443965869-7 chr7 66158663 66159022 + 0.342618443965869 NA intron (NM_001081163, intron 2 of 2) intron (NM_001081163, intron 2 of 2) 49327 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_41_267_-0.0620022354729173_8.03508807272131_0.342472824601775-2 chr7 120842713 120843433 + 0.342472824601775 NA promoter-TSS (NM_001267710) promoter-TSS (NM_001267710) 242 NM_007908 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding common_peak1_41_267_-0.0620022354729173_8.03508807272131_0.342472824601775 chr19 58143625 58144398 + 0.342472824601775 NA Intergenic Intergenic 92844 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA common_peak2_41_267_-0.0620022354729173_8.03508807272131_0.342472824601775 chr16 55554754 55556598 + 0.342472824601775 NA Intergenic Intergenic 60945 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak2_512_5575_-0.0122470940116823_12.4388912988626_0.342410117792883 chr2 122145126 122150689 + 0.342410117792883 NA intron (NM_009735, intron 1 of 3) intron (NM_009735, intron 1 of 3) 220 NM_009735 12010 Mm.163 NM_009735 ENSMUSG00000060802 B2m Ly-m11|beta2-m|beta2m beta-2 microglobulin protein-coding common_peak1_92_665_0.0314383538163288_9.39509754397942_0.342330889362024-2 chr9 120570813 120572137 + 0.342330889362024 NA promoter-TSS (NM_025974) promoter-TSS (NM_025974) -42 NM_025974 67115 Mm.289810 NM_025974 ENSMUSG00000025794 Rpl14 3100001N19Rik|AA407502|AL022816|CAG-ISL-7|CTG-B33|L14 ribosomal protein L14 protein-coding common_peak1_92_665_0.0314383538163288_9.39509754397942_0.342330889362024 chr19 53944828 53945855 + 0.342330889362024 NA promoter-TSS (NM_001195338) promoter-TSS (NM_001195338) 465 NM_019658 56392 Mm.228669 NM_019658 ENSMUSG00000024976 Shoc2 AU017287|Sur8|mKIAA0862 soc-2 (suppressor of clear) homolog (C. elegans) protein-coding common_peak1_100_770_-0.0337388563095775_9.57371762176025_0.342236073053149 chr14 73524417 73525602 + 0.342236073053149 NA intron (NM_172527, intron 3 of 4) CpG 14960 NM_026119 67381 Mm.282888 NM_026119 ENSMUSG00000022109 Med4 2410046H15Rik|DRIP36|HSPC126|TRAP36|Vdirp|Vdrip mediator complex subunit 4 protein-coding common_peak2_64_452_-0.0464527197133382_8.80014088018957_0.342218756451988 chr13 95955755 95957938 + 0.342218756451988 NA Intergenic Intergenic -64924 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding common_peak2_167_1383_0.0226833497208414_10.4459699024971_0.34221758710212 chr5 72867661 72869782 + 0.34221758710212 NA promoter-TSS (NM_001113464) promoter-TSS (NM_001113464) -273 NM_001113460 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak1_83_586_0.0334825730611588_9.21395797964063_0.342192109956901 chr13 100594041 100595015 + 0.342192109956901 NA Intergenic Intergenic 22416 NM_178410 218518 Mm.25300 NM_178410 ENSMUSG00000021636 Marveld2 BC003296|MARVD2|Mrvldc2|Tric|Trica|Tricb|Tricc MARVEL (membrane-associating) domain containing 2 protein-coding common_peak2_112_846_0.0293013388402024_9.7408688287523_0.342174443266395 chr17 73107133 73108974 + 0.342174443266395 NA promoter-TSS (NM_001081071) promoter-TSS (NM_001081071) 68 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding common_peak2_218_1919_0.019562946930396_10.9166720690737_0.341987725602182 chr1 92933406 92935582 + 0.341987725602182 NA promoter-TSS (NM_011796) promoter-TSS (NM_011796) 86 NM_011796 23830 Mm.294315 NM_011796 ENSMUSG00000026270 Capn10 AW049679|Capn8|mKIAA1845 calpain 10 protein-coding common_peak1_36_211_0.0518631966482115_7.7538520528873_0.341842536263249 chr4 130359435 130359971 + 0.341842536263249 NA promoter-TSS (NM_025645) promoter-TSS (NM_025645) 240 NM_153160 619605 Mm.297196 NM_153160 ENSMUSG00000028772 Zcchc17 2810055E05Rik|HSPC251|LDC4|pNO40|pS1D zinc finger, CCHC domain containing 17 protein-coding common_peak1_193_1652_0.0210796652574512_10.701410841921_0.341798485086681 chr3 88149463 88152151 + 0.341798485086681 NA intron (NM_001310587, intron 1 of 11) intron (NM_001310587, intron 1 of 11) 8435 NM_001310593 17261 Mm.28184 NM_133665 ENSMUSG00000001419 Mef2d C80750 myocyte enhancer factor 2D protein-coding common_peak1_43_262_0.0474910645880051_8.0626645215863_0.34169665005605-2 chr8 54077073 54077964 + 0.34169665005605 NA promoter-TSS (NM_009506) promoter-TSS (NM_009506) -14 NM_009506 22341 Mm.1402 NM_009506 ENSMUSG00000031520 Vegfc AW228853|VEGF-C vascular endothelial growth factor C protein-coding unique_peak2_43_262_0.0474910645880051_8.0626645215863_0.34169665005605 chr16 18234325 18235916 + 0.34169665005605 NA promoter-TSS (NM_172151) promoter-TSS (NM_172151) 16 NM_172151 27801 Mm.326263 NM_172151 ENSMUSG00000060166 Zdhhc8 D16H22S1738E|DHHC-8|E330009O14Rik|Op53c05|ZDHHCL1 zinc finger, DHHC domain containing 8 protein-coding common_peak1_43_262_0.0474910645880051_8.0626645215863_0.34169665005605 chr3 95855328 95855829 + 0.34169665005605 NA 5' UTR (NM_027541, exon 1 of 16) 5' UTR (NM_027541, exon 1 of 16) 175 NM_027541 70767 Mm.279872 NM_027541 ENSMUSG00000015748 Prpf3 3632413F13Rik pre-mRNA processing factor 3 protein-coding common_peak2_43_262_0.0474910645880051_8.0626645215863_0.34169665005605 chr3 95881708 95883294 + 0.34169665005605 NA promoter-TSS (NM_001033302) promoter-TSS (NM_001033302) -273 NM_001033302 229599 Mm.331218 NM_001033302 ENSMUSG00000038550 Ciart Chrono|Gm129 circadian associated repressor of transcription protein-coding common_peak1_35_221_-0.0631181932910829_7.76285676970456_0.341653998465473 chr1 143917997 143918714 + 0.341653998465473 NA Intergenic Intergenic 85794 NM_009061 19735 Mm.28262 NM_009061 ENSMUSG00000026360 Rgs2 GOS8 regulator of G-protein signaling 2 protein-coding unique_peak2_35_221_-0.0631181932910829_7.76285676970456_0.341653998465473 chr16 43672280 43673444 + 0.341653998465473 NA Intergenic ORR1B2|LTR|ERVL-MaLR -8678 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak1_35_221_-0.0631181932910829_7.76285676970456_0.341653998465473-3 chr7 66059883 66060504 + 0.341653998465473 NA promoter-TSS (NM_021336) promoter-TSS (NM_021336) -143 NM_021336 68981 Mm.22362 NM_021336 ENSMUSG00000030512 Snrpa1 1500015N06Rik small nuclear ribonucleoprotein polypeptide A' protein-coding common_peak1_35_221_-0.0631181932910829_7.76285676970456_0.341653998465473-2 chr3 79628986 79629778 + 0.341653998465473 NA promoter-TSS (NM_025794) promoter-TSS (NM_025794) 303 NM_029482 75939 Mm.221520 NM_029482 ENSMUSG00000027811 4930579G24Rik - RIKEN cDNA 4930579G24 gene protein-coding common_peak2_204_1821_-0.0217583918583042_10.8204280478729_0.34162534957934 chr14 56777059 56779531 + 0.34162534957934 NA promoter-TSS (NM_025682) promoter-TSS (NM_025682) 21 NM_025682 66645 Mm.20129 NM_025682 ENSMUSG00000021938 Pspc1 5730470C09Rik|AI327109|AI449052|PSP1 paraspeckle protein 1 protein-coding common_peak2_318_3121_-0.0162100943374863_11.6001497748092_0.341465476566529 chr15 76510595 76515921 + 0.341465476566529 NA Intergenic Intergenic -1440 NM_010046 13350 Mm.22633 NM_010046 ENSMUSG00000022555 Dgat1 ARAT|C75990|D15Ertd23e|Dgat diacylglycerol O-acyltransferase 1 protein-coding common_peak1_57_393_-0.0467761937574505_8.59866372257765_0.341431100980219 chr11 75926166 75927145 + 0.341431100980219 NA promoter-TSS (NM_001291159) promoter-TSS (NM_001291159) -764 NM_001291159 380714 Mm.425697 NM_029548 ENSMUSG00000020847 Rph3al Gm1753|Noc2 rabphilin 3A-like (without C2 domains) protein-coding common_peak1_306_2912_0.0159012857597887_11.5162406290202_0.341404692021952 chr14 26638030 26639928 + 0.341404692021952 NA intron (NM_007479, intron 1 of 5) intron (NM_007479, intron 1 of 5) 782 NM_007479 11843 Mm.297768 NM_007479 ENSMUSG00000021877 Arf4 AA407803 ADP-ribosylation factor 4 protein-coding common_peak1_42_274_-0.0575606381580709_8.07450748933299_0.341394260790222 chr11 57685915 57686884 + 0.341394260790222 NA intron (NM_134189, intron 1 of 11) PB1D7|SINE|Alu 40957 NM_134189 171212 Mm.271670 NM_134189 ENSMUSG00000020520 Galnt10 AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 protein-coding common_peak1_102_789_-0.0341609592877266_9.6086283634206_0.341232938125834 chr14 75182481 75183827 + 0.341232938125834 NA intron (NM_008879, intron 2 of 16) intron (NM_008879, intron 2 of 16) 46729 NM_008879 18826 Mm.153911 NM_008879 ENSMUSG00000021998 Lcp1 AW536232|D14Ertd310e|LCP-1|Pls2|pp65 lymphocyte cytosolic protein 1 protein-coding common_peak2_30_169_0.0572912685966047_7.438036570436_0.341199538851325 chr9 77528859 77530196 + 0.341199538851325 NA intron (NM_001146048, intron 1 of 13) intron (NM_001146048, intron 1 of 13) 14532 NM_172528 214345 Mm.28534 NM_172528 ENSMUSG00000032352 Lrrc1 A430093J20Rik|AU016091|D030059I21|mKIAA4018 leucine rich repeat containing 1 protein-coding common_peak2_24_129_0.0636473791079295_7.05419150258242_0.34118642031761 chr6 128604584 128605420 + 0.34118642031761 NA Intergenic Intergenic 17932 NM_001159902 17057 Mm.16729 NM_010737 ENSMUSG00000030361 Klrb1a Ly55a|NKR-P1.7|NKR-P1A|NKRP12|Nkrp1-a|Nkrp1a|ly-55A killer cell lectin-like receptor subfamily B member 1A protein-coding unique_peak2_23_136_-0.0842566148684316_7.05590377552631_0.34118642031761 chr15 62031349 62032135 + 0.34118642031761 NA Intergenic Intergenic -6244 NR_132747 19296 Mm.4608 NM_011222 ENSMUSG00000097039 Pvt1 Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1 plasmacytoma variant translocation 1 ncRNA common_peak1_23_136_-0.0842566148684316_7.05590377552631_0.34118642031761-2 chr6 48748710 48749243 + 0.34118642031761 NA intron (NM_175035, intron 1 of 2) intron (NM_175035, intron 1 of 2) 2779 NM_175035 317757 Mm.455917 NM_175035 ENSMUSG00000043505 Gimap5 D630024P16|E230026N22Rik GTPase, IMAP family member 5 protein-coding unique_peak2_24_129_0.0636473791079295_7.05419150258242_0.34118642031761 chr2 58177974 58179196 + 0.34118642031761 NA Intergenic Intergenic 14611 NR_045895 100042926 Mm.446515 NR_045895 ENSMUSG00000086862 Gm13546 OTTMUSG00000012675 predicted gene 13546 ncRNA common_peak1_23_136_-0.0842566148684316_7.05590377552631_0.34118642031761 chr1 92060191 92060724 + 0.34118642031761 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 119884 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_23_136_-0.0842566148684316_7.05590377552631_0.34118642031761-3 chr8 70805504 70806009 + 0.34118642031761 NA Intergenic Intergenic -2693 NM_008353 16161 Mm.731 NM_008353 ENSMUSG00000000791 Il12rb1 CD212|IL-12R[b] interleukin 12 receptor, beta 1 protein-coding common_peak2_249_2260_0.0179878134495315_11.1517391834763_0.341175536803375 chr10 54036891 54041665 + 0.341175536803375 NA intron (NM_008548, intron 2 of 12) intron (NM_008548, intron 2 of 12) 36518 NM_008548 17155 Mm.117294 NM_008548 ENSMUSG00000003746 Man1a Man1a1|PCR1 mannosidase 1, alpha protein-coding common_peak2_67_451_0.0365819209316953_8.83846992288104_0.341138321831646 chr11 90637395 90638968 + 0.341138321831646 NA promoter-TSS (NM_199008) promoter-TSS (NM_199008) -3 NM_199008 69802 Mm.151940 NM_199008 ENSMUSG00000020544 Cox11 2010004I09Rik cytochrome c oxidase assembly protein 11 protein-coding common_peak1_276_2627_-0.0175295112748_11.3509848046849_0.340983992174618 chr12 3426126 3428060 + 0.340983992174618 NA promoter-TSS (NR_030694) promoter-TSS (NR_030694) 236 NM_172421 75302 Mm.120475 NM_172421 ENSMUSG00000037486 Asxl2 4930556B16Rik|mKIAA1685 additional sex combs like 2 (Drosophila) protein-coding common_peak1_29_178_-0.0751593446665533_7.44623610493098_0.340968638608969 chr2 112379087 112379745 + 0.340968638608969 NA intron (NM_024254, intron 1 of 9) CpG 205 NM_024254 72425 Mm.425091 NM_024254 ENSMUSG00000027132 Katnbl1 2410042D21Rik|AA166487|AA473307|AI467442 katanin p80 subunit B like 1 protein-coding common_peak2_250_2272_0.0174155119961501_11.1590897248159_0.340964842304156 chr4 6365011 6367443 + 0.340964842304156 NA intron (NM_016807, intron 1 of 8) intron (NM_016807, intron 1 of 8) 547 NM_001098227 53378 Mm.247473 NM_016807 ENSMUSG00000028249 Sdcbp MDA-9|Sycl|syntenin-1 syndecan binding protein protein-coding common_peak2_306_2978_-0.0164211363493934_11.5324018400748_0.340954792023237 chr1 151342830 151347320 + 0.340954792023237 NA intron (NM_054102, intron 1 of 14) CpG 577 NM_001039511 117198 Mm.33764 NM_028582 ENSMUSG00000023150 Ivns1abp 1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850 influenza virus NS1A binding protein protein-coding common_peak1_59_386_0.03907898763965_8.61572924996424_0.340915740250664 chr17 27634372 27635272 + 0.340915740250664 NA intron (NM_025963, intron 1 of 5) intron (NM_025963, intron 1 of 5) 420 NM_025963 67097 Mm.275810 NM_025963 ENSMUSG00000052146 Rps10 2210402A09Rik ribosomal protein S10 protein-coding common_peak1_59_386_0.03907898763965_8.61572924996424_0.340915740250664-2 chr2 25224953 25225656 + 0.340915740250664 NA promoter-TSS (NM_146116) promoter-TSS (NM_146116) -602 NM_146116 227613 Mm.227260 NM_146116 ENSMUSG00000036752 Tubb4b 4930542G03Rik|Tubb2c|Tubb2c1 tubulin, beta 4B class IVB protein-coding common_peak2_148_1192_0.0245466744123934_10.2326516649014_0.340848353329175 chr10 20951666 20953511 + 0.340848353329175 NA promoter-TSS (NM_026203) promoter-TSS (NM_026203) 41 NM_026203 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak1_265_2440_0.0172560440675635_11.2618846018149_0.340833199911385 chr8 128684828 128686871 + 0.340833199911385 NA 5' UTR (NM_010578, exon 1 of 16) 5' UTR (NM_010578, exon 1 of 16) 195 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak2_115_875_0.0271008772841075_9.78833749824323_0.340824634546693 chr1 91350176 91353584 + 0.340824634546693 NA intron (NM_027551, intron 1 of 7) intron (NM_027551, intron 1 of 7) 807 NM_027551 70788 Mm.68617 NM_027551 ENSMUSG00000026308 Klhl30 4631423F02Rik kelch-like 30 protein-coding common_peak1_170_1460_-0.0241072271000391_10.5006868492535_0.340682083078967 chr12 76961059 76962324 + 0.340682083078967 NA intron (NM_008558, intron 1 of 4) intron (NM_008558, intron 1 of 4) 557 NM_008558 17187 Mm.268548 NM_008558 ENSMUSG00000059436 Max AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8 Max protein protein-coding common_peak2_161_1323_0.0222669873720172_10.3818209004932_0.340422970057809 chrX 167226157 167230444 + 0.340422970057809 NA Intergenic Intergenic -19082 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_253_2305_0.0176462077086281_11.1799999015061_0.340396673637353 chr19 44265807 44268179 + 0.340396673637353 NA Intergenic CpG -26683 NM_009128 20250 Mm.487021 NM_009128 ENSMUSG00000025203 Scd2 Mir5114|Scd-2|mir-5114|swty stearoyl-Coenzyme A desaturase 2 protein-coding common_peak2_96_701_0.0300111430588483_9.47033279183399_0.340233714516352 chr5 139148582 139151147 + 0.340233714516352 NA promoter-TSS (NM_001081265) promoter-TSS (NM_001081265) -359 NM_001081265 433956 Mm.5547 NM_001081265 ENSMUSG00000025857 Dnaaf5 BC053401|C76907|Heatr2 dynein, axonemal assembly factor 5 protein-coding common_peak2_43_282_-0.0582481889515751_8.11553414835609_0.340228377321351 chr2 163812498 163813856 + 0.340228377321351 NA Intergenic Intergenic -7657 NM_016873 22403 Mm.13828 NM_016873 ENSMUSG00000027656 Wisp2 Ccn5|Crgr4|Ctgfl|Rcop1 WNT1 inducible signaling pathway protein 2 protein-coding common_peak1_43_282_-0.0582481889515751_8.11553414835609_0.340228377321351-2 chr2 3742245 3742763 + 0.340228377321351 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 29046 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_43_282_-0.0582481889515751_8.11553414835609_0.340228377321351 chr12 70825480 70826107 + 0.340228377321351 NA intron (NM_028127, intron 1 of 13) CpG 279 NM_028127 319710 Mm.2962 NM_028127 ENSMUSG00000048285 Frmd6 2610019M19Rik|4930488L10Rik|AW212977|Willin FERM domain containing 6 protein-coding common_peak1_254_2317_0.0171115129993051_11.1872206075061_0.340194054617018 chr2 174329082 174331531 + 0.340194054617018 NA exon (NM_001077510, exon 1 of 11) exon (NM_001077510, exon 1 of 11) 217 NM_001077510 14683 Mm.125770 NM_010309 ENSMUSG00000027523 Gnas 5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6 GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus protein-coding common_peak1_614_6956_-0.0105662372701314_12.7589664867321_0.340192402206991 chr10 127163169 127168171 + 0.340192402206991 NA promoter-TSS (NM_001244618) promoter-TSS (NM_001244618) -161 NM_027739 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding common_peak2_52_330_0.0450543586358947_8.39321458612516_0.340189448946034 chr7 82648326 82649250 + 0.340189448946034 NA promoter-TSS (NM_177894) promoter-TSS (NM_177894) 174 NM_175317 101592 Mm.238020 NM_175317 ENSMUSG00000038563 Efl1 4932434J20Rik|6030468D11Rik|AI451340|AU019507|AU022896|D7Ertd791e|Eftud1 elongation factor like GPTase 1 protein-coding common_peak2_162_1333_0.0223014927367853_10.392693697553_0.340129860999015 chr7 122066056 122068262 + 0.340129860999015 NA promoter-TSS (NM_026140) promoter-TSS (NM_026140) -39 NM_138589 28018 Mm.282122 NM_138589 ENSMUSG00000030870 Ubfd1 AI467302|D7Wsu105e|D7Wsu128e|Ubph ubiquitin family domain containing 1 protein-coding unique_peak2_19_97_0.076424383515568_6.65292203587299_0.340122364122499 chr1 186749319 186749841 + 0.340122364122499 NA promoter-TSS (NM_026041) promoter-TSS (NM_026041) -222 NM_026041 67223 Mm.289841 NM_026041 ENSMUSG00000001305 Rrp15 2810430M08Rik|5430437H21Rik ribosomal RNA processing 15 homolog (S. cerevisiae) protein-coding unique_peak2_18_103_-0.100075514744201_6.65040196076899_0.340122364122499-2 chr4 117208292 117209294 + 0.340122364122499 NA Intergenic RLTR28|LTR|ERVL -26169 NM_134471 73804 Mm.247651 NM_134471 ENSMUSG00000028678 Kif2c 4930402F02Rik|ESTM5|Knsl6|MCAK|X83316 kinesin family member 2C protein-coding unique_peak2_19_97_0.076424383515568_6.65292203587299_0.340122364122499-2 chr9 56095572 56096715 + 0.340122364122499 NA intron (NM_011193, intron 1 of 14) intron (NM_011193, intron 1 of 14) 6167 NM_011193 19200 Mm.2534 NM_011193 ENSMUSG00000032322 Pstpip1 CD2BP1|def-2 proline-serine-threonine phosphatase-interacting protein 1 protein-coding common_peak1_18_103_-0.100075514744201_6.65040196076899_0.340122364122499 chr13 51716649 51717239 + 0.340122364122499 NA intron (NM_001281880, intron 7 of 16) intron (NM_001281880, intron 7 of 16) 65236 NM_029279 75420 Mm.275981 NM_029279 ENSMUSG00000035139 Secisbp2 2210413N07Rik|2810012K13Rik|SBP2 SECIS binding protein 2 protein-coding common_peak1_18_103_-0.100075514744201_6.65040196076899_0.340122364122499-2 chr15 64025040 64025449 + 0.340122364122499 NA intron (NM_144846, intron 1 of 11) intron (NM_144846, intron 1 of 11) 35204 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak1_19_97_0.076424383515568_6.65292203587299_0.340122364122499-2 chr17 84858911 84859357 + 0.340122364122499 NA Intergenic Intergenic -68348 NM_028233 72416 Mm.217027 NM_028233 ENSMUSG00000024120 Lrpprc 3110001K13Rik|C76645|Gp130|Lrp130|Lsfc leucine-rich PPR-motif containing protein-coding common_peak1_19_97_0.076424383515568_6.65292203587299_0.340122364122499 chr11 106999634 107000050 + 0.340122364122499 NA promoter-TSS (NM_010655) promoter-TSS (NM_010655) -317 NM_010655 16647 Mm.12508 NM_010655 ENSMUSG00000018362 Kpna2 2410044B12Rik|IPOA1|PTAC58|Rch1 karyopherin (importin) alpha 2 protein-coding unique_peak2_18_103_-0.100075514744201_6.65040196076899_0.340122364122499 chr3 144561403 144562269 + 0.340122364122499 NA intron (NM_011828, intron 1 of 6) intron (NM_011828, intron 1 of 6) 8380 NM_011828 23908 Mm.12863 NM_011828 ENSMUSG00000040151 Hs2st1 AW214369|Hs2st|mKIAA0448 heparan sulfate 2-O-sulfotransferase 1 protein-coding common_peak2_18_103_-0.100075514744201_6.65040196076899_0.340122364122499 chr10 81770715 81771390 + 0.340122364122499 NA promoter-TSS (NM_199062).2 promoter-TSS (NM_199062).2 90 NM_199062 331188 Mm.351497 NM_199062 ENSMUSG00000096718 Zfp781 A130081B01 zinc finger protein 781 protein-coding unique_peak2_13_72_-0.129872120048447_6.12488849885579_0.340093681644832 chr15 36214796 36215315 + 0.340093681644832 NA intron (NM_012031, intron 12 of 18) intron (NM_012031, intron 12 of 18) 25109 NR_106173 102465888 NR_106173 ENSMUSG00000098457 Mir8097 Gm27497|mmu-mir-8097 microRNA 8097 ncRNA unique_peak2_13_72_-0.129872120048447_6.12488849885579_0.340093681644832-2 chr16 10844077 10844811 + 0.340093681644832 NA Intergenic Intergenic 9385 NM_001162932 223970 Mm.325777 NM_001033278 ENSMUSG00000037991 Rmi2 A630055G03Rik|Gm537|Gm929 RecQ mediated genome instability 2 protein-coding common_peak1_13_72_-0.129872120048447_6.12488849885579_0.340093681644832 chr12 8658016 8658372 + 0.340093681644832 NA Intergenic Intergenic -15940 NM_001160221 80913 Mm.341243 NM_030723 ENSMUSG00000020594 Pum2 5730503J23Rik|Pumm2 pumilio RNA-binding family member 2 protein-coding common_peak2_117_894_0.0263948440765631_9.8189412941899_0.339987288538241 chr4 129541700 129543516 + 0.339987288538241 NA promoter-TSS (NM_008228) promoter-TSS (NM_008228) 38 NM_008228 433759 Mm.202504 NM_008228 ENSMUSG00000028800 Hdac1 HD1|Hdac1-ps|MommeD5|RPD3 histone deacetylase 1 protein-coding common_peak2_175_1465_0.0219652881192083_10.5286520321934_0.339930114832267 chr1 153486067 153488418 + 0.339930114832267 NA intron (NM_007842, intron 1 of 27) CpG 418 NM_007842 13211 Mm.20000 NM_007842 ENSMUSG00000042699 Dhx9 AI326842|Ddx9|HEL-5|NDHII|RHA|mHEL-5 DEAH (Asp-Glu-Ala-His) box polypeptide 9 protein-coding common_peak1_398_4024_0.0132617609263015_11.9814039483525_0.339808349622617 chr19 53394177 53396947 + 0.339808349622617 NA Intergenic Intergenic -4989 NM_172429 76479 Mm.313687 NM_172429 ENSMUSG00000025024 Smndc1 2410004J23Rik|4933440I19Rik survival motor neuron domain containing 1 protein-coding common_peak1_213_1918_-0.0205562656532514_10.8958608633688_0.33955825661444 chr11 98148723 98150738 + 0.33955825661444 NA promoter-TSS (NM_028149) promoter-TSS (NM_028149) -114 NM_028149 72194 Mm.218350 NM_028149 ENSMUSG00000020883 Fbxl20 2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147 F-box and leucine-rich repeat protein 20 protein-coding common_peak1_164_1353_0.0224135109642045_10.4142187790571_0.339556536668978 chr18 35598517 35599780 + 0.339556536668978 NA intron (NM_026420, intron 1 of 3) CpG 481 NM_026420 67869 Mm.126534 NM_026420 ENSMUSG00000037058 Paip2 2310050K10Rik|AU045972 polyadenylate-binding protein-interacting protein 2 protein-coding common_peak2_129_1008_0.0248163724128947_9.99111864531281_0.339551515532221 chr11 114668496 114670529 + 0.339551515532221 NA intron (NM_023372, intron 3 of 4) PB1D10|SINE|Alu 731 NM_001048058 67671 Mm.238817 NM_023372 ENSMUSG00000057322 Rpl38 0610025G13Rik|Rbt|Ts|Tss ribosomal protein L38 protein-coding unique_peak2_14_68_0.0735196646331788_6.14528428909476_0.339539352694109 chr13 63634319 63634968 + 0.339539352694109 NA Intergenic Intergenic -69123 NM_008957 19206 Mm.228798 NM_008957 ENSMUSG00000021466 Ptch1 A230106A15Rik|Ptc|Ptc1|Ptch|mes patched 1 protein-coding unique_peak2_14_68_0.0735196646331788_6.14528428909476_0.339539352694109-2 chr7 30428990 30429691 + 0.339539352694109 NA TTS (NM_172142) TTS (NM_172142) 6036 NM_172142 243910 Mm.386878 NM_172142 ENSMUSG00000036931 Nfkbid IkappaBNS nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta protein-coding common_peak1_45_277_0.0461320425563585_8.14200709400169_0.339533297052267 chr3 60479952 60480827 + 0.339533297052267 NA intron (NM_001253713, intron 2 of 9) intron (NM_001253713, intron 2 of 9) 7559 NM_001253713 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_334_3244_0.0146465241415452_11.6713260249573_0.33951870274168 chr14 56885204 56887639 + 0.33951870274168 NA Intergenic CpG -1374 NM_029498 76007 Mm.31417 NM_029498 ENSMUSG00000021945 Zmym2 5830413P05Rik|FIM|MYM|RAMP|SCLL|Zfp198|Znf198 zinc finger, MYM-type 2 protein-coding common_peak1_106_825_-0.0310275520636729_9.67448419538761_0.339460299519655 chr8 35425236 35427261 + 0.339460299519655 NA Intergenic Intergenic 50507 NM_177741 244416 Mm.247126 NM_177741 ENSMUSG00000046794 Ppp1r3b 6430576E21|AW821953|GL|PTG protein phosphatase 1, regulatory (inhibitor) subunit 3B protein-coding common_peak1_30_185_-0.0724766063737246_7.50292050792117_0.33942379361645 chr13 49682185 49682720 + 0.33942379361645 NA intron (NM_172015, intron 1 of 33) intron (NM_172015, intron 1 of 33) 322 NM_172015 105148 Mm.21118 NM_172015 ENSMUSG00000037851 Iars 2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS isoleucine-tRNA synthetase protein-coding common_peak2_30_185_-0.0724766063737246_7.50292050792117_0.33942379361645 chr17 44459295 44460814 + 0.33942379361645 NA Intergenic Intergenic 271482 NM_172621 224796 Mm.37666 NM_172621 ENSMUSG00000023959 Clic5 5730531E12Rik|B330005L24|Gm322|jbg chloride intracellular channel 5 protein-coding unique_peak2_5_27_-0.246804076338219_4.68395288388849_0.339372226903478 chr14 40684776 40685006 + 0.339372226903478 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat 208074 NM_177816 328381 Mm.235694 NM_177816 ENSMUSG00000037833 Sh2d4b A430109M18Rik|D030001E08 SH2 domain containing 4B protein-coding common_peak1_38_225_0.0527644871926727_7.84656120601152_0.339352552858525-2 chr3 144198362 144199163 + 0.339352552858525 NA intron (NM_010723, intron 2 of 4) CpG 3570 NM_001161770 16911 Mm.29187 NM_010723 ENSMUSG00000028266 Lmo4 A730077C12Rik|Crp3|Etohi4 LIM domain only 4 protein-coding common_peak1_38_225_0.0527644871926727_7.84656120601152_0.339352552858525 chr14 70350879 70351421 + 0.339352552858525 NA intron (NM_001135151, intron 1 of 9) CpG 274 NM_144808 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak1_61_402_0.038658487392695_8.67396527222432_0.339351478330962 chr7 75891524 75892946 + 0.339351478330962 NA Intergenic B3A|SINE|B2 43897 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_88_630_0.0315221737816387_9.31725728187337_0.339350981027762 chr3 129361517 129365811 + 0.339350981027762 NA Intergenic Intergenic -30915 NM_007934 13809 Mm.1193 NM_007934 ENSMUSG00000028024 Enpep 6030431M22Rik|APA|Bp-1/6C3|Ly-51|Ly51 glutamyl aminopeptidase protein-coding common_peak1_228_2083_-0.0196716675203348_11.0153037285183_0.339276301871081 chr4 138325451 138326402 + 0.339276301871081 NA exon (NM_026880, exon 1 of 8) exon (NM_026880, exon 1 of 8) 370 NM_026880 68943 Mm.18539 NM_026880 ENSMUSG00000028756 Pink1 1190006F07Rik|AU042772|AW557854|BRPK|mFLJ00387 PTEN induced putative kinase 1 protein-coding common_peak1_259_2373_0.0170349230637026_11.2216216811738_0.33927543070314 chr1 106711681 106714950 + 0.33927543070314 NA 5' UTR (NM_009741, exon 1 of 2) 5' UTR (NM_009741, exon 1 of 2) 975 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak2_98_719_0.0296013674844904_9.50665378007192_0.33926301879908 chr19 61140142 61141649 + 0.33926301879908 NA promoter-TSS (NM_001309216) promoter-TSS (NM_001309216) -55 NR_131954 414758 Mm.100056 NM_001001737 ENSMUSG00000074733 Zfp950 5830428H23Rik|AU016073|BC055757|Gm34518|Zfp826|mszf84 zinc finger protein 950 protein-coding common_peak1_151_1265_-0.0258605524723841_10.2931314131921_0.339197812079686 chr17 27056026 27058125 + 0.339197812079686 NA promoter-TSS (NM_080553) promoter-TSS (NM_080553) -229 NM_080553 16440 Mm.458106 NM_080553 ENSMUSG00000042644 Itpr3 IP3R 3|Ip3r3|Itpr-3|tf inositol 1,4,5-triphosphate receptor 3 protein-coding common_peak1_119_913_0.0258306999123459_9.84896570501424_0.339184455216273 chr16 97961619 97963490 + 0.339184455216273 NA promoter-TSS (NM_175428) promoter-TSS (NM_175428) 67 NM_001081685 114565 Mm.474489 NM_175428 ENSMUSG00000046962 Zbtb21 5430437K12Rik|B430213I24Rik|Zfp295|Znf295|mKIAA1227 zinc finger and BTB domain containing 21 protein-coding unique_peak2_24_143_-0.0839098093059283_7.12797009678935_0.33917096843448-2 chr3 60505972 60507333 + 0.33917096843448 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 5473 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_25_136_0.0573891616804056_7.12672666380073_0.33917096843448-2 chr16 36709110 36709671 + 0.33917096843448 NA intron (NM_134109, intron 2 of 7) intron (NM_134109, intron 2 of 7) 15412 NM_001285791 106347 Mm.17807 NM_134109 ENSMUSG00000022900 Ildr1 AU041483|AU044638 immunoglobulin-like domain containing receptor 1 protein-coding common_peak1_25_136_0.0573891616804056_7.12672666380073_0.33917096843448-3 chr5 139251567 139251999 + 0.33917096843448 NA promoter-TSS (NM_026269) promoter-TSS (NM_026269) -541 NM_026269 67604 Mm.270137 NM_026269 ENSMUSG00000025858 Get4 1110007L15Rik|AW412535|Cee golgi to ER traffic protein 4 protein-coding common_peak2_25_136_0.0573891616804056_7.12672666380073_0.33917096843448 chr2 28180307 28180969 + 0.33917096843448 NA Intergenic Intergenic -12455 NM_001038613 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding unique_peak2_25_136_0.0573891616804056_7.12672666380073_0.33917096843448 chr1 151177351 151178425 + 0.33917096843448 NA Intergenic Intergenic 39854 NR_038011 402734 Mm.337666 NR_038011 C730036E19Rik lncLSTR RIKEN cDNA C730036E19 gene ncRNA unique_peak2_24_143_-0.0839098093059283_7.12797009678935_0.33917096843448 chr16 59600253 59601302 + 0.33917096843448 NA Intergenic CpG -36168 NR_040564 75145 Mm.399348 NR_040564 4930547E14Rik - RIKEN cDNA 4930547E14 gene ncRNA common_peak1_25_136_0.0573891616804056_7.12672666380073_0.33917096843448-4 chr9 54642136 54642695 + 0.33917096843448 NA intron (NM_053178, intron 2 of 13) intron (NM_053178, intron 2 of 13) 19470 NM_053178 94180 Mm.20592 NM_053178 ENSMUSG00000032281 Acsbg1 BG1|Bgm|E230019G03Rik|GR-LACS|Lpd|R75185 acyl-CoA synthetase bubblegum family member 1 protein-coding common_peak1_25_136_0.0573891616804056_7.12672666380073_0.33917096843448 chr11 6274380 6274795 + 0.33917096843448 NA intron (NM_134020, intron 1 of 4) intron (NM_134020, intron 1 of 4) 250 NM_134020 103694 Mm.254495 NM_134020 ENSMUSG00000004394 Tmed4 1110014L17Rik|AI326346 transmembrane p24 trafficking protein 4 protein-coding common_peak2_79_552_0.0332231797687808_9.1277472601191_0.339099737722039 chr4 150854875 150856075 + 0.339099737722039 NA promoter-TSS (NR_040649) promoter-TSS (NR_040649) 384 NM_133753 74155 Mm.318841 NM_133753 ENSMUSG00000028967 Errfi1 1300002F13Rik|AI788755|Mig-6|Mig6|RALT ERBB receptor feedback inhibitor 1 protein-coding common_peak1_37_236_-0.0617667343150128_7.85785988174075_0.339021430559195 chr12 102702790 102703530 + 0.339021430559195 NA intron (NM_172584, intron 1 of 9) intron (NM_172584, intron 1 of 9) 1709 NM_172584 217837 Mm.482192 NM_172584 ENSMUSG00000057963 Itpk1 BC031182 inositol 1,3,4-triphosphate 5/6 kinase protein-coding common_peak2_87_651_-0.0357057891644139_9.33087525964887_0.33899365954645-2 chr9 62979939 62981128 + 0.33899365954645 NA intron (NM_019663, intron 1 of 13) CpG 346 NM_019663 56469 Mm.431253 NM_019663 ENSMUSG00000032405 Pias1 2900068C24Rik|Ddxbp1|GBP protein inhibitor of activated STAT 1 protein-coding common_peak2_87_651_-0.0357057891644139_9.33087525964887_0.33899365954645 chr11 120466652 120468246 + 0.33899365954645 NA promoter-TSS (NM_008244) promoter-TSS (NM_008244) 151 NM_197995 70317 Mm.485046 NM_197995 ENSMUSG00000057594 Arl16 2600005N12Rik ADP-ribosylation factor-like 16 protein-coding common_peak1_60_418_-0.0462869826523793_8.68766294237316_0.33897939866637 chr4 59275556 59276468 + 0.33897939866637 NA Intergenic Tigger19a|DNA|TcMar-Tigger 15961 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_60_418_-0.0462869826523793_8.68766294237316_0.33897939866637 chr9 45241001 45242290 + 0.33897939866637 NA intron (NM_001198971, intron 2 of 4) intron (NM_001198971, intron 2 of 4) 25062 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak1_338_3292_0.0144672177303367_11.6924204054605_0.338960384720101 chr8 117279333 117284031 + 0.338960384720101 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 24663 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_97_742_-0.0337298524415548_9.52035347431782_0.338898384178844 chr12 65172372 65173483 + 0.338898384178844 NA promoter-TSS (NM_172578) promoter-TSS (NM_172578) -347 NM_172578 217653 Mm.21144 NM_172578 ENSMUSG00000047534 Mis18bp1 6720403H11|C79407|Knl2|mKIAA1903 MIS18 binding protein 1 protein-coding common_peak2_131_1027_0.024920020839712_10.0180845596137_0.338845360621604 chr8 46616415 46619114 + 0.338845360621604 NA promoter-TSS (NM_001001184) promoter-TSS (NM_001001184) 473 NM_009810 12367 Mm.34405 NM_009810 ENSMUSG00000031628 Casp3 A830040C14Rik|AC-3|CASP-3|CC3|CPP-32|CPP32|Caspase-3|Lice|SCA-1|Yama|mldy caspase 3 protein-coding common_peak1_129_1046_-0.0285188954115565_10.017786279225_0.338845360621209-2 chr15 100687380 100688302 + 0.338845360621209 NA promoter-TSS (NM_033612) promoter-TSS (NM_033612) 79 NM_033612 109901 Mm.2131 NM_033612 ENSMUSG00000023031 Cela1 1810009A17Rik|1810062B19Rik|Ela-1|Ela1|PC-TsF chymotrypsin-like elastase family, member 1 protein-coding common_peak1_129_1046_-0.0285188954115565_10.017786279225_0.338845360621209 chr14 77860293 77861604 + 0.338845360621209 NA intron (NM_025384, intron 1 of 5) intron (NM_025384, intron 1 of 5) 13969 NM_025384 66148 Mm.248046 NM_025384 ENSMUSG00000022013 Dnajc15 1110003P16Rik|Dnajd1 DnaJ heat shock protein family (Hsp40) member C15 protein-coding common_peak2_203_1809_-0.0208785824703988_10.8113346907354_0.338802920992365 chr16 20097012 20098864 + 0.338802920992365 NA intron (NM_029436, intron 1 of 7) CpG 384 NM_029436 75785 Mm.392450 NM_029436 ENSMUSG00000062901 Klhl24 1110046J11Rik|4930429H24Rik|6530402O20Rik|C85082 kelch-like 24 protein-coding common_peak1_78_571_-0.0377722456650726_9.14098521394585_0.338762222599852 chr9 110665466 110666549 + 0.338762222599852 NA intron (NM_028312, intron 1 of 6) intron (NM_028312, intron 1 of 6) 9504 NM_028312 72654 Mm.249115 NM_028312 ENSMUSG00000019659 Ccdc12 2700094L05Rik|C76605 coiled-coil domain containing 12 protein-coding common_peak2_62_410_0.0386145762700991_8.70230187181673_0.338614475132021 chr17 34931088 34932214 + 0.338614475132021 NA intron (NM_010893, intron 1 of 5) intron (NM_010893, intron 1 of 5) 398 NM_010893 18010 Mm.8856 NM_010893 ENSMUSG00000007038 Neu1 AA407268|AA407316|Aglp|Apl|Bat-7|Bat7|G9|Map-2|Neu|Neu-1 neuraminidase 1 protein-coding common_peak2_325_3137_0.0148271181396282_11.6230431960379_0.338523958626022 chr1 75140867 75143667 + 0.338523958626022 NA promoter-TSS (NM_001305232) promoter-TSS (NM_001305232) 101 NM_026977 69171 Mm.28193 NM_026977 ENSMUSG00000033159 Cnppd1 1810031K17Rik|AU043960 cyclin Pas1/PHO80 domain containing 1 protein-coding common_peak1_130_1055_-0.0273068575115811_10.0307406906027_0.338519824808978 chr2 34825506 34826776 + 0.338519824808978 NA promoter-TSS (NM_013890) promoter-TSS (NM_013890) 94 NM_001164770 30050 Mm.4465 NM_013890 ENSMUSG00000035949 Fbxw2 2700071L08Rik|FBW2|Fwd2|MD6 F-box and WD-40 domain protein 2 protein-coding common_peak2_80_561_0.031915762771952_9.1503842016069_0.338496489190551 chr16 57166382 57167614 + 0.338496489190551 NA intron (NM_023175, intron 1 of 9) CpG 334 NM_023175 52633 Mm.383203 NM_023175 ENSMUSG00000022751 Nit2 1190017B19Rik|D16Ertd502e nitrilase family, member 2 protein-coding common_peak2_372_3776_-0.014233044478571_11.8759085462009_0.338473303323929 chr10 119080281 119086787 + 0.338473303323929 NA Intergenic LTR104_Mam|LTR|Gypsy -9371 NR_045348 73400 Mm.416864 NR_045348 ENSMUSG00000100681 1700064J06Rik - RIKEN cDNA 1700064J06 gene ncRNA common_peak2_88_660_-0.0354880927435044_9.35076241513594_0.338469999579576 chr11 57444449 57446338 + 0.338469999579576 NA Intergenic Intergenic 73251 NM_001168667 67726 Mm.25632 NM_026342 ENSMUSG00000020523 Fam114a2 1810073G14Rik|9030624B09Rik family with sequence similarity 114, member A2 protein-coding common_peak1_71_484_0.0360690471708889_8.93987546065993_0.338439738661612 chr5 34549173 34550237 + 0.338439738661612 NA exon (NM_001145859, exon 1 of 13) exon (NM_001145859, exon 1 of 13) 129 NM_001145859 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak1_54_346_0.042499165807655_8.46004143548209_0.338406792860141 chr11 118130247 118130926 + 0.338406792860141 NA Intergenic Intergenic -1367 NM_001167746 69926 Mm.473893 NM_001167746 ENSMUSG00000033987 Dnah17 2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028 dynein, axonemal, heavy chain 17 protein-coding common_peak1_100_737_0.0293711875450615_9.54216259983293_0.338339231956005 chr8 114815505 114816940 + 0.338339231956005 NA intron (NM_019573, intron 8 of 8) AT_rich|Low_complexity|Low_complexity 376570 NM_019573 80707 Mm.440420 NM_019573 ENSMUSG00000004637 Wwox 5330426P09Rik|9030416C10Rik|WOX1 WW domain-containing oxidoreductase protein-coding common_peak2_90_648_0.0302703747209083_9.35720985535959_0.3382986419519 chr2 121505939 121507295 + 0.3382986419519 NA promoter-TSS (NM_026220) promoter-TSS (NM_026220) 39 NM_026220 67532 Mm.440764 NM_026220 ENSMUSG00000068479 Mfap1a 4432409M24Rik|Mfap1 microfibrillar-associated protein 1A protein-coding common_peak1_61_426_-0.0447977436998279_8.71569338777058_0.338256503238007 chr3 88579605 88580434 + 0.338256503238007 NA exon (NM_025448, exon 1 of 5) exon (NM_025448, exon 1 of 5) 348 NM_025448 66256 Mm.7091 NM_025448 ENSMUSG00000041355 Ssr2 1500032E05Rik|AI315033|AU020133|TLAP|TRAPB|TRAPbeta signal sequence receptor, beta protein-coding common_peak1_45_297_-0.0540954051822968_8.19212081787101_0.338214559655706 chr12 40445193 40445842 + 0.338214559655706 NA promoter-TSS (NM_172803) promoter-TSS (NM_172803) 273 NM_172575 246196 Mm.26852 NM_172575 ENSMUSG00000055917 Zfp277 2410017E24Rik|NIRF4 zinc finger protein 277 protein-coding common_peak1_32_183_0.0537579916038666_7.55044095185895_0.338191715997839 chr6 65573185 65573710 + 0.338191715997839 NA Intergenic Intergenic -16951 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding common_peak1_79_580_-0.0380355034010407_9.16337660170401_0.338169540100373 chr11 100618712 100619683 + 0.338169540100373 NA intron (NM_019795, intron 1 of 13) CpG 971 NM_019795 56354 Mm.402409 NM_019795 ENSMUSG00000014195 Dnajc7 2010003F24Rik|2010004G07Rik|CCRP|Ttc2|mDj11|mTpr2 DnaJ heat shock protein family (Hsp40) member C7 protein-coding common_peak1_111_838_0.0272623719508136_9.72615818641523_0.338098281115357 chr8 47532970 47534328 + 0.338098281115357 NA promoter-TSS (NM_203507) promoter-TSS (NM_203507) 4 NM_203507 192174 Mm.273081 NM_203507 ENSMUSG00000031568 Rwdd4a BC016198|Gm1942|Rwdd4 RWD domain containing 4A protein-coding common_peak2_53_360_-0.0470351488612195_8.47233745245656_0.338090461609432 chr2 117328020 117329528 + 0.338090461609432 NA intron (NM_011246, intron 2 of 16) intron (NM_011246, intron 2 of 16) 14103 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak1_39_233_0.0473818192337276_7.89405562920027_0.338061530570006 chr7 79278865 79279593 + 0.338061530570006 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 5963 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak1_81_569_0.0332374671996778_9.17143684265194_0.337976095423876 chr11 82889557 82890708 + 0.337976095423876 NA intron (NM_001277938, intron 1 of 9) intron (NM_001277938, intron 1 of 9) 492 NR_102719 19364 Mm.9286 NM_011235 ENSMUSG00000018841 Rad51d R51H3|Rad51l3|TRAD|Trad-d5 RAD51 paralog D protein-coding common_peak1_81_569_0.0332374671996778_9.17143684265194_0.337976095423876-2 chr5 109690275 109691536 + 0.337976095423876 NA Intergenic Intergenic -131912 NM_001164735 57914 Mm.35771 NM_016715 ENSMUSG00000033467 Crlf2 CRLM2|Ly114|Tpte2|Tslpr cytokine receptor-like factor 2 protein-coding common_peak1_89_669_-0.0352263365941479_9.37040411704806_0.337960589791309 chr4 34614238 34615622 + 0.337960589791309 NA promoter-TSS (NM_015824) promoter-TSS (NM_015824) 12 NM_001159563 50793 Mm.399624 NM_015824 ENSMUSG00000040044 Orc3 Orc3l origin recognition complex, subunit 3 protein-coding common_peak1_19_109_-0.0902254858938836_6.73624697057772_0.337908979693415-3 chr8 70421347 70421747 + 0.337908979693415 NA intron (NM_001004062, intron 1 of 13) intron (NM_001004062, intron 1 of 13) 18026 NM_001004062 382056 Mm.227767 NM_001004062 ENSMUSG00000003575 Crtc1 AI413414|Mect1|R74955|TORC1|mKIAA0616 CREB regulated transcription coactivator 1 protein-coding common_peak1_19_109_-0.0902254858938836_6.73624697057772_0.337908979693415-2 chr7 101463784 101464234 + 0.337908979693415 NA intron (NM_001243757, intron 2 of 30) intron (NM_001243757, intron 2 of 30) -11367 NR_029791 387157 NR_029791 ENSMUSG00000065446 Mir139 Mirn139|mir-139|mmu-mir-139 microRNA 139 ncRNA common_peak2_19_109_-0.0902254858938836_6.73624697057772_0.337908979693415 chr11 98907231 98907662 + 0.337908979693415 NA promoter-TSS (NM_011799) promoter-TSS (NM_011799) -443 NM_001025779 23834 Mm.20912 NM_011799 ENSMUSG00000017499 Cdc6 CDC18L cell division cycle 6 protein-coding unique_peak2_19_109_-0.0902254858938836_6.73624697057772_0.337908979693415-3 chr4 150922019 150922924 + 0.337908979693415 NA intron (NM_011612, intron 1 of 7) MLTR18D_MM|LTR|ERVK 2316 NM_001077508 21942 Mm.244187 NM_011612 ENSMUSG00000028965 Tnfrsf9 4-1BB|A930040I11Rik|AA408498|AI325004|CDw137|Cd137|ILA|Ly63 tumor necrosis factor receptor superfamily, member 9 protein-coding unique_peak2_19_109_-0.0902254858938836_6.73624697057772_0.337908979693415 chr17 7939014 7939850 + 0.337908979693415 NA Intergenic Intergenic -6182 NM_025789 66832 Mm.29830 NM_025789 ENSMUSG00000073471 Rsph3a 1700012G05Rik|4930524H12Rik|R74860|Rshl2|Rshl2a radial spoke 3A homolog (Chlamydomonas) protein-coding common_peak1_19_109_-0.0902254858938836_6.73624697057772_0.337908979693415 chr2 45115082 45115543 + 0.337908979693415 NA Intergenic Intergenic -2033 NM_015753 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding unique_peak2_19_109_-0.0902254858938836_6.73624697057772_0.337908979693415-2 chr17 24126844 24127659 + 0.337908979693415 NA intron (NM_001286662, intron 1 of 13) intron (NM_001286662, intron 1 of 13) 14343 NM_011062 18607 Mm.10504 NM_011062 ENSMUSG00000024122 Pdpk1 Pdk1 3-phosphoinositide dependent protein kinase 1 protein-coding common_peak1_38_243_-0.0577938879550262_7.90184039358537_0.337906243611865 chr4 135120938 135121717 + 0.337906243611865 NA intron (NM_019732, intron 1 of 5) intron (NM_019732, intron 1 of 5) 682 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak2_63_418_0.0386714517985283_8.73014215959862_0.337905286213435 chr2 60402567 60402920 + 0.337905286213435 NA Intergenic Intergenic -8782 NR_046065 100039176 Mm.261790 NR_046065 ENSMUSG00000087283 Gm13580 OTTMUSG00000012842 predicted gene 13580 ncRNA common_peak2_295_2847_-0.0161128461959201_11.4676770078684_0.337879640867189 chr5 100036957 100040842 + 0.337879640867189 NA exon (NM_016690, exon 1 of 8) exon (NM_016690, exon 1 of 8) 323 NM_016690 50926 Mm.389579 NM_016690 ENSMUSG00000029328 Hnrnpdl AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|JKTBP|hnRNP DL|hnRNP-DL heterogeneous nuclear ribonucleoprotein D-like protein-coding common_peak2_91_657_0.0297416527309817_9.37681460010073_0.337793853150248 chr6 34475227 34476970 + 0.337793853150248 NA promoter-TSS (NM_007563) promoter-TSS (NM_007563) -258 NM_007563 12183 Mm.282863 NM_007563 ENSMUSG00000038871 Bpgm AI323730|AL022789|C86192 2,3-bisphosphoglycerate mutase protein-coding common_peak2_26_142_0.0623362300612058_7.19103945180899_0.337597834806264 chr17 28908961 28909856 + 0.337597834806264 NA exon (NM_172450, exon 2 of 12) exon (NM_172450, exon 2 of 12) 4143 NR_045457 74179 Mm.248931 NR_045457 ENSMUSG00000085333 1700030A11Rik - RIKEN cDNA 1700030A11 gene ncRNA common_peak2_26_142_0.0623362300612058_7.19103945180899_0.337597834806264-2 chr8 70172193 70172793 + 0.337597834806264 NA promoter-TSS (NR_122028) promoter-TSS (NR_122028) 85 NR_122028 234371 Mm.23488 NM_145597 ENSMUSG00000002342 Tmem161a AI428876|BB161850|BC021367 transmembrane protein 161A protein-coding common_peak1_26_142_0.0623362300612058_7.19103945180899_0.337597834806264 chr7 80209890 80210477 + 0.337597834806264 NA intron (NM_013659, intron 2 of 14) L4_B_Mam|LINE|RTE-X 22622 NM_001291276 23991 Mm.30217 NM_011870 ENSMUSG00000030538 Cib1 Cibkip|Kip|Prkdcip calcium and integrin binding 1 (calmyrin) protein-coding common_peak2_80_589_-0.0382290612563256_9.18545661362104_0.337595189334626 chr18 73753629 73755125 + 0.337595189334626 NA intron (NM_053255, intron 1 of 3) CpG 102 NM_053255 114615 Mm.50642 NM_053255 ENSMUSG00000036941 Elac1 2610018O07Rik|8430417G19Rik elaC ribonuclease Z 1 protein-coding common_peak1_47_292_0.0456309248562032_8.21757231685035_0.337588497237328 chr15 103254846 103255614 + 0.337588497237328 NA 5' UTR (NM_008685, exon 1 of 3) 5' UTR (NM_008685, exon 1 of 3) 209 NM_008685 18022 Mm.457989 NM_008685 ENSMUSG00000058794 Nfe2 NF-E2|NF-E2/P45|p45|p45NFE2|p45nf-e2 nuclear factor, erythroid derived 2 protein-coding common_peak2_47_292_0.0456309248562032_8.21757231685035_0.337588497237328 chr6 85936460 85937619 + 0.337588497237328 NA Intergenic CpG 21320 NM_001170488 69786 Mm.218434 NM_176842 ENSMUSG00000054226 Tprkb 0610033G21Rik|1810034M08Rik|Cgi-121|DRWMS1|mDRWMS1 Tp53rk binding protein protein-coding common_peak1_47_292_0.0456309248562032_8.21757231685035_0.337588497237328-2 chr6 113442590 113443190 + 0.337588497237328 NA intron (NM_001243739, intron 1 of 1) CpG 321 NM_001243739 67767 Mm.2053 NM_026365 ENSMUSG00000051256 Jagn1 5830427H10Rik jagunal homolog 1 protein-coding common_peak2_20_104_0.0632291261323754_6.74586008073231_0.337564225507046 chr3 96579651 96580380 + 0.337564225507046 NA intron (NM_027241, intron 6 of 7) intron (NM_027241, intron 6 of 7) -13214 NR_040409 100038464 Mm.475126 NR_040409 ENSMUSG00000074398 Gm15441 ENSMUSG00000074398|OTTMUSG00000021867 predicted gene 15441 ncRNA common_peak1_20_104_0.0632291261323754_6.74586008073231_0.337564225507046-4 chr9 75407307 75407789 + 0.337564225507046 NA intron (NM_015806, intron 1 of 5) intron (NM_015806, intron 1 of 5) 1811 NM_027418 50772 Mm.480076 NM_015806 ENSMUSG00000042688 Mapk6 2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6 mitogen-activated protein kinase 6 protein-coding common_peak1_20_104_0.0632291261323754_6.74586008073231_0.337564225507046 chr1 52801998 52802430 + 0.337564225507046 NA intron (NM_008384, intron 1 of 5) intron (NM_008384, intron 1 of 5) 15474 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding common_peak1_20_104_0.0632291261323754_6.74586008073231_0.337564225507046-2 chr15 96696057 96696519 + 0.337564225507046 NA intron (NM_175121, intron 4 of 15) intron (NM_175121, intron 4 of 15) 3410 NM_175121 67760 Mm.46754 NM_175121 ENSMUSG00000022462 Slc38a2 5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382 solute carrier family 38, member 2 protein-coding unique_peak2_20_104_0.0632291261323754_6.74586008073231_0.337564225507046-3 chr16 17619162 17619807 + 0.337564225507046 NA intron (NM_001164609, intron 1 of 19) CpG 130 NM_001164609 77626 Mm.34659 NM_029945 ENSMUSG00000005899 Smpd4 4122402O22Rik|mKIAA1418 sphingomyelin phosphodiesterase 4 protein-coding common_peak1_20_104_0.0632291261323754_6.74586008073231_0.337564225507046-3 chr7 120882485 120883011 + 0.337564225507046 NA intron (NM_001267711, intron 6 of 17) intron (NM_001267711, intron 6 of 17) 31559 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding unique_peak2_20_104_0.0632291261323754_6.74586008073231_0.337564225507046-2 chr13 52614558 52615357 + 0.337564225507046 NA intron (NM_001198977, intron 3 of 13) intron (NM_001198977, intron 3 of 13) 18075 NM_011518 20963 Mm.375031 NM_011518 ENSMUSG00000021457 Syk Sykb spleen tyrosine kinase protein-coding unique_peak2_20_104_0.0632291261323754_6.74586008073231_0.337564225507046 chr12 70104422 70105325 + 0.337564225507046 NA intron (NM_001286079, intron 1 of 28) intron (NM_001286079, intron 1 of 28) -2019 NM_001081453 18080 Mm.244047 NM_008697 ENSMUSG00000021068 Nin 3110068G20Rik|AI385615|AU024711|mKIAA1565 ninein protein-coding common_peak2_100_769_-0.0318664419768062_9.57278141459386_0.33755477728021 chr7 92740477 92741554 + 0.33755477728021 NA promoter-TSS (NM_029494) promoter-TSS (NM_029494) 444 NR_015510 666737 Mm.473620 NR_015510 ENSMUSG00000074024 4632427E13Rik AU015482 RIKEN cDNA 4632427E13 gene ncRNA common_peak1_90_678_-0.0349227215246852_9.38980640348239_0.337464856301579 chr15 102073798 102074789 + 0.337464856301579 NA intron (NM_145625, intron 1 of 14) CpG 520 NM_145625 75705 Mm.290022 NM_145625 ENSMUSG00000058655 Eif4b 2310046H11Rik|AL024095|C85189|Eif4a2 eukaryotic translation initiation factor 4B protein-coding common_peak2_102_756_0.0273983937910067_9.57784868688124_0.337411350109582 chr1 74303279 74304865 + 0.337411350109582 NA intron (NM_027154, intron 1 of 11) CpG 264 NM_027154 69660 Mm.261182 NM_027154 ENSMUSG00000006301 Tmbim1 2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161 transmembrane BAX inhibitor motif containing 1 protein-coding common_peak2_350_3437_0.0138586524363671_11.7542831556962_0.337368041994176 chr15 97371545 97375775 + 0.337368041994176 NA intron (NM_172293, intron 4 of 5) intron (NM_172293, intron 4 of 5) -126373 NM_001164602 105827 Mm.24005 NM_178114 ENSMUSG00000048218 Amigo2 AI415330|AMIGO-2|AW208913|Ali1 adhesion molecule with Ig like domain 2 protein-coding unique_peak2_25_150_-0.0829834946841466_7.19691299198301_0.337348177312279 chr6 81965322 81966192 + 0.337348177312279 NA exon (NM_026490, exon 1 of 5) exon (NM_026490, exon 1 of 5) 192 NM_026490 56284 Mm.276293 NM_026490 ENSMUSG00000030045 Mrpl19 9030416F12Rik|9130412E02Rik|D6Ertd157e|MRP-L15|RLX1|Rpml15 mitochondrial ribosomal protein L19 protein-coding common_peak2_113_857_0.0262771932369859_9.75797243411804_0.337284508358232 chr2 3738692 3741039 + 0.337284508358232 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 26407 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding common_peak1_318_3055_0.0146158996046744_11.5847367778381_0.337233151100001 chr11 83527895 83530570 + 0.337233151100001 NA exon (NM_013653, exon 2 of 3) exon (NM_013653, exon 2 of 3) 1286 NM_013653 20304 Mm.284248 NM_013653 ENSMUSG00000035042 Ccl5 MuRantes|RANTES|SISd|Scya5|TCP228 chemokine (C-C motif) ligand 5 protein-coding unique_peak2_46_305_-0.0542567552666338_8.23025946505933_0.337222878194288 chr3 52928654 52930771 + 0.337222878194288 NA Intergenic Intergenic -2046 NR_040555 622124 Mm.389434 NR_040555 ENSMUSG00000104401 Gm20750 - predicted gene, 20750 ncRNA common_peak2_46_305_-0.0542567552666338_8.23025946505933_0.337222878194288-2 chr3 88530876 88532231 + 0.337222878194288 NA promoter-TSS (NM_001029890) promoter-TSS (NM_001029890) -842 NM_001029890 72640 Mm.275154 NM_001029890 ENSMUSG00000074480 Mex3a 2700083E18Rik|Gm411|Rkhd4 mex3 RNA binding family member A protein-coding common_peak2_46_305_-0.0542567552666338_8.23025946505933_0.337222878194288 chr1 173422084 173423926 + 0.337222878194288 NA intron (NM_001013779, intron 1 of 8) intron (NM_001013779, intron 1 of 8) 2401 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_73_501_0.0348524084469943_8.98896975817427_0.337186534696394 chr6 47676471 47677616 + 0.337186534696394 NA promoter-TSS (NR_002841).7 promoter-TSS (NR_002841).7 -306 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_73_501_0.0348524084469943_8.98896975817427_0.337186534696394-2 chrX 52988154 52988966 + 0.337186534696394 NA intron (NM_013556, intron 1 of 8) CpG 482 NM_013556 15452 Mm.299381 NM_013556 ENSMUSG00000025630 Hprt C81579|HPGRT|Hprt1 hypoxanthine guanine phosphoribosyl transferase protein-coding common_peak1_64_427_0.0354475339317499_8.75919075336702_0.337138775626271 chr9 35175490 35176286 + 0.337138775626271 NA promoter-TSS (NM_027030) promoter-TSS (NM_027030) 99 NM_027030 69305 Mm.229110 NM_027030 ENSMUSG00000032040 Dcps 1700001E16Rik|AA408441 decapping enzyme, scavenger protein-coding common_peak2_64_427_0.0354475339317499_8.75919075336702_0.337138775626271 chr2 118744965 118746768 + 0.337138775626271 NA 5' UTR (NM_001301269, exon 1 of 1) 5' UTR (NM_001301269, exon 1 of 1) 108 NM_001301269 100043272 Mm.398072 NM_001301269 ENSMUSG00000074918 Inafm2 5430417L22Rik|ENSMUSG00000074918 InaF motif containing 2 protein-coding unique_peak2_40_240_0.0485539288354637_7.93716630064769_0.337001201524253 chr13 41344877 41346641 + 0.337001201524253 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) 13242 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding common_peak1_40_240_0.0485539288354637_7.93716630064769_0.337001201524253 chr15 5514523 5515241 + 0.337001201524253 NA intron (NR_045274, intron 1 of 4) intron (NR_045274, intron 1 of 4) 18564 NR_045274 71432 Mm.291087 NR_045274 5430437J10Rik - RIKEN cDNA 5430437J10 gene ncRNA common_peak2_40_240_0.0485539288354637_7.93716630064769_0.337001201524253 chr11 76456290 76457847 + 0.337001201524253 NA intron (NM_198018, intron 9 of 21) intron (NM_198018, intron 9 of 21) 11397 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding unique_peak2_14_78_-0.121736626765755_6.24291243479423_0.336988098307292-5 chr18 80548614 80549196 + 0.336988098307292 NA Intergenic Intergenic -4359 NR_028424 100039348 Mm.254722 NR_028424 Gm2176 A430076E10Rik glucosamine-6-phosphate deaminase 1 pseudogene pseudo unique_peak2_14_78_-0.121736626765755_6.24291243479423_0.336988098307292-6 chr2 118700405 118701043 + 0.336988098307292 NA 3' UTR (NM_001081971, exon 1 of 1) 3' UTR (NM_001081971, exon 1 of 1) 3239 NM_001081971 383787 Mm.35758 NM_001081971 ENSMUSG00000078137 Ankrd63 Gm1337 ankyrin repeat domain 63 protein-coding common_peak1_14_78_-0.121736626765755_6.24291243479423_0.336988098307292 chr16 91374412 91374811 + 0.336988098307292 NA intron (NM_010509, intron 1 of 8) PB1D7|SINE|Alu 1828 NM_001110498 15976 Mm.6834 NM_010509 ENSMUSG00000022971 Ifnar2 AI747302|Ifnar-2 interferon (alpha and beta) receptor 2 protein-coding unique_peak2_14_78_-0.121736626765755_6.24291243479423_0.336988098307292-2 chr15 4085760 4086414 + 0.336988098307292 NA intron (NM_024188, intron 7 of 16) MLTR25C|LTR|ERVK -58681 NR_028266 414066 Mm.394461 NR_028266 BC037032 - cDNA Sequence BC037032 ncRNA unique_peak2_14_78_-0.121736626765755_6.24291243479423_0.336988098307292-4 chr18 67257849 67258709 + 0.336988098307292 NA Intergenic Lx7|LINE|L1 -12449 NM_172630 225651 Mm.235792 NM_172630 ENSMUSG00000062526 Mppe1 A530095G11 metallophosphoesterase 1 protein-coding unique_peak2_14_78_-0.121736626765755_6.24291243479423_0.336988098307292-3 chr17 9976195 9976766 + 0.336988098307292 NA Intergenic Intergenic -200614 NR_045433 71092 Mm.243827 NR_045433 4930452A19Rik 4933424P20Rik RIKEN cDNA 4930452A19 gene ncRNA unique_peak2_14_78_-0.121736626765755_6.24291243479423_0.336988098307292 chr11 117242434 117243212 + 0.336988098307292 NA intron (NM_001113486, intron 2 of 11) B3|SINE|B2 -23423 NM_001113487 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak2_14_78_-0.121736626765755_6.24291243479423_0.336988098307292-7 chr2 122666128 122666751 + 0.336988098307292 NA Intergenic Intergenic 25636 NR_030547 387165 NR_030547 ENSMUSG00000076309 Mir147 Mirn147|mmu-mir-147 microRNA 147 ncRNA common_peak1_14_78_-0.121736626765755_6.24291243479423_0.336988098307292-2 chr5 103691618 103692132 + 0.336988098307292 NA Intergenic MIRb|SINE|MIR -36143 NM_001163550 74218 Mm.159141 NM_028824 ENSMUSG00000029320 1700016H13Rik - RIKEN cDNA 1700016H13 gene protein-coding unique_peak2_14_78_-0.121736626765755_6.24291243479423_0.336988098307292-8 chr7 80339102 80339744 + 0.336988098307292 NA intron (NM_133952, intron 2 of 19) intron (NM_133952, intron 2 of 19) 796 NM_133952 101869 Mm.243024 NM_133952 ENSMUSG00000030533 Unc45a AW538196 unc-45 myosin chaperone A protein-coding common_peak2_83_587_0.0310269213348473_9.21518580550379_0.336856464002282 chr6 120466016 120467663 + 0.336856464002282 NA intron (NM_008359, intron 1 of 12) intron (NM_008359, intron 1 of 12) 3642 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak1_33_190_0.0527197441247784_7.60378870009814_0.336850635556861-2 chr16 57241715 57242091 + 0.336850635556861 NA Intergenic (CATTC)n|Simple_repeat|Simple_repeat -10437 NM_026254 67581 Mm.257819 NM_026254 ENSMUSG00000022749 Tbc1d23 4930451A13Rik|AU015720|AU043671|AU043778|D030022P07Rik|W51689 TBC1 domain family, member 23 protein-coding common_peak1_33_190_0.0527197441247784_7.60378870009814_0.336850635556861-3 chr17 84328590 84329151 + 0.336850635556861 NA intron (NM_183021, intron 28 of 37) intron (NM_183021, intron 28 of 37) 137338 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak1_33_190_0.0527197441247784_7.60378870009814_0.336850635556861 chr12 102671785 102672516 + 0.336850635556861 NA intron (NM_172584, intron 2 of 9) intron (NM_172584, intron 2 of 9) 12870 NR_035457 100316812 NR_035457 ENSMUSG00000089324 Mir1936 mir-1936|mmu-mir-1936 microRNA 1936 ncRNA common_peak2_149_1203_0.0231423427163229_10.2451908481179_0.33683373856742 chr11 34007811 34011015 + 0.33683373856742 NA Intergenic Intergenic -16220 NM_001190886 70357 Mm.252514 NM_027398 ENSMUSG00000053519 Kcnip1 KCHIP1|Kchip1.2 Kv channel-interacting protein 1 protein-coding unique_peak2_39_251_-0.0595333846827844_7.94751323115852_0.336709313337384 chr2 181428910 181430522 + 0.336709313337384 NA intron (NM_028125, intron 1 of 2) intron (NM_028125, intron 1 of 2) -5328 NM_027656 72147 Mm.486504 NM_027656 ENSMUSG00000027583 Zbtb46 2610019F01Rik|4933406L05Rik|BZEL|Btbd4 zinc finger and BTB domain containing 46 protein-coding common_peak1_32_199_-0.0665362421138447_7.6105880687178_0.336666914129493 chr10 75434035 75434524 + 0.336666914129493 NA intron (NM_133995, intron 6 of 9) intron (NM_133995, intron 6 of 9) -15231 NR_045841 71125 Mm.399516 NR_045841 4933407G14Rik - RIKEN cDNA 4933407G14 gene ncRNA common_peak1_32_199_-0.0665362421138447_7.6105880687178_0.336666914129493-2 chr4 123916651 123917253 + 0.336666914129493 NA promoter-TSS (NM_017475) promoter-TSS (NM_017475) -481 NM_017475 54170 Mm.220922 NM_017475 ENSMUSG00000028646 Rragc AU041672|Gtr2|RAGC|TIB929|YGR163W Ras-related GTP binding C protein-coding unique_peak2_48_300_0.0432565601509829_8.25524795683519_0.336629498647836 chr13 56151899 56153793 + 0.336629498647836 NA Intergenic Intergenic -17296 NM_001159513 26914 Mm.283802 NM_012015 ENSMUSG00000015937 H2afy H2AF12M|mH2a1|macroH2A1 H2A histone family, member Y protein-coding common_peak1_186_1626_-0.0210808615705034_10.6574581048873_0.336605053527982 chr10 96377601 96379779 + 0.336605053527982 NA Intergenic Intergenic 152483 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak1_15_74_0.0674345726292875_6.26253597681052_0.336517889197633-6 chr4 138963025 138963420 + 0.336517889197633 NA Intergenic B1F|SINE|Alu -3890 NM_025786 66825 Mm.252312 NM_025786 ENSMUSG00000070661 Rnf186 9130020G10Rik ring finger protein 186 protein-coding unique_peak2_15_74_0.0674345726292875_6.26253597681052_0.336517889197633-2 chr4 108371641 108372304 + 0.336517889197633 NA intron (NM_001099303, intron 2 of 2) intron (NM_001099303, intron 2 of 2) 11683 NM_001099303 545667 Mm.380025 NM_001099303 ENSMUSG00000059816 Fam159a OTTMUSG00000008243 family with sequence similarity 159, member A protein-coding common_peak1_15_74_0.0674345726292875_6.26253597681052_0.336517889197633-5 chr4 11899529 11899862 + 0.336517889197633 NA Intergenic MTC|LTR|ERVL-MaLR 66018 NM_001098231 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding common_peak1_15_74_0.0674345726292875_6.26253597681052_0.336517889197633-3 chr18 15063006 15063476 + 0.336517889197633 NA exon (NM_001142731, exon 1 of 5) exon (NM_001142731, exon 1 of 5) 341 NM_001142731 106931 Mm.329299 NM_134112 ENSMUSG00000036225 Kctd1 4933402K10Rik|AI661543|AW553000 potassium channel tetramerisation domain containing 1 protein-coding common_peak1_15_74_0.0674345726292875_6.26253597681052_0.336517889197633-2 chr10 111578185 111578542 + 0.336517889197633 NA Intergenic Intergenic 15910 NR_045344 71321 Mm.410785 NR_045344 ENSMUSG00000097082 4933440J02Rik - RIKEN cDNA 4933440J02 gene ncRNA common_peak1_15_74_0.0674345726292875_6.26253597681052_0.336517889197633 chr1 36293947 36294346 + 0.336517889197633 NA Intergenic Intergenic -13587 NM_001290727 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding unique_peak2_15_74_0.0674345726292875_6.26253597681052_0.336517889197633 chr2 126605630 126606291 + 0.336517889197633 NA intron (NM_008230, intron 4 of 11) intron (NM_008230, intron 4 of 11) 12718 NM_008230 15186 Mm.18603 NM_008230 ENSMUSG00000027360 Hdc AW108189|Hdc-a|Hdc-c|Hdc-e|Hdc-s histidine decarboxylase protein-coding common_peak1_15_74_0.0674345726292875_6.26253597681052_0.336517889197633-4 chr19 5512181 5512627 + 0.336517889197633 NA Intergenic Intergenic -1915 NM_001024560 225861 Mm.20071 NM_001024560 ENSMUSG00000056185 Snx32 B930037P14Rik|Snx6b sorting nexin 32 protein-coding common_peak2_65_435_0.0357479340703097_8.78605829181208_0.336483700273447 chr18 38575100 38577046 + 0.336483700273447 NA Intergenic (GA)n|Simple_repeat|Simple_repeat 25195 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty homolog 4 (Drosophila) protein-coding common_peak1_187_1637_-0.0213639318422771_10.6670376757199_0.336364307793621 chr7 127294748 127297493 + 0.336364307793621 NA promoter-TSS (NM_008400) promoter-TSS (NM_008400) -140 NM_001253873 16408 Mm.1618 NM_008400 ENSMUSG00000030830 Itgal (p180)|Cd11a|LFA-1|LFA-1A|Ly-15|Ly-21 integrin alpha L protein-coding common_peak2_73_527_-0.037998156960688_9.02539504087811_0.336283441983974 chr8 116943173 116945295 + 0.336283441983974 NA intron (NM_177700, intron 1 of 3) intron (NM_177700, intron 1 of 3) 841 NM_177700 234776 Mm.259736 NM_177700 ENSMUSG00000047388 Atmin Asciz|gpg6|mKIAA0431 ATM interactor protein-coding common_peak2_64_451_-0.0432644420822914_8.79854674137404_0.336164995886298 chr17 27564659 27566371 + 0.336164995886298 NA intron (NM_001002895, intron 1 of 4) CpG 212 NM_001002895 106672 Mm.61488 NM_001002895 ENSMUSG00000062753 AI413582 AI854251 expressed sequence AI413582 protein-coding common_peak2_218_1921_0.0180609217651639_10.9174230816563_0.336126445369278 chr7 75655195 75657903 + 0.336126445369278 NA intron (NM_029332, intron 8 of 36) L1M4|LINE|L1 -191789 NM_001122780 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_162_1376_-0.0234684002135932_10.4155786440282_0.3360951282113 chr3 58576167 58577780 + 0.3360951282113 NA intron (NM_001040396, intron 1 of 5) CpG 315 NM_001040396 69227 Mm.270950 NM_001040396 ENSMUSG00000075700 Selenot 2810407C02Rik|5730408P04Rik|Selt selenoprotein T protein-coding common_peak1_57_370_0.0400002490781226_8.55527550115986_0.336017686382441 chr12 85219448 85220179 + 0.336017686382441 NA intron (NM_145445, intron 1 of 7) CpG 332 NM_145445 217715 Mm.29041 NM_145445 ENSMUSG00000004788 Eif2b2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B, subunit 2 beta protein-coding common_peak1_26_156_-0.0724131820520322_7.25841415786561_0.335919009133409 chr2 130839684 130840210 + 0.335919009133409 NA promoter-TSS (NM_001311147) promoter-TSS (NM_001311147) 198 NM_029432 228602 Mm.271990 NM_028367 ENSMUSG00000027309 4930402H24Rik 2810487F15Rik|AI413763|C78926 RIKEN cDNA 4930402H24 gene protein-coding common_peak1_26_156_-0.0724131820520322_7.25841415786561_0.335919009133409-2 chr3 87527555 87528168 + 0.335919009133409 NA intron (NM_001286844, intron 2 of 4) intron (NM_001286844, intron 2 of 4) 2283 NM_012051 27049 Mm.219460 NM_012051 ENSMUSG00000003382 Etv3 AI414410|METS|Pe1 ets variant 3 protein-coding common_peak2_66_443_0.0361278337996183_8.81247978324991_0.33585197048565 chr5 140331348 140332490 + 0.33585197048565 NA promoter-TSS (NM_008637) promoter-TSS (NM_008637) -3 NM_008637 17766 Mm.118846 NM_008637 ENSMUSG00000036639 Nudt1 Mth1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 protein-coding common_peak1_115_910_-0.0294193069167701_9.81659759034367_0.335836696997421 chr13 119462120 119463516 + 0.335836696997421 NA promoter-TSS (NM_026127) promoter-TSS (NM_026127) 59 NM_026127 67392 Mm.390641 NM_026127 ENSMUSG00000062822 4833420G17Rik 2210017J06Rik|5730533D17Rik|AW107518|C85193 RIKEN cDNA 4833420G17 gene protein-coding common_peak1_115_910_-0.0294193069167701_9.81659759034367_0.335836696997421-2 chrX 135008747 135009746 + 0.335836696997421 NA promoter-TSS (NM_175446) promoter-TSS (NM_175446) -37 NM_175446 215693 Mm.336238 NM_175446 ENSMUSG00000052676 Zmat1 A230096A06|AW990744|B930008K04Rik zinc finger, matrin type 1 protein-coding common_peak2_249_2262_0.0167122209341688_11.152376979734_0.335813838182091 chr14 105986496 105990146 + 0.335813838182091 NA Intergenic ORR1C1-int|LTR|ERVL-MaLR -91502 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty homolog 2 (Drosophila) protein-coding common_peak1_106_792_0.027793363651794_9.64507373752988_0.335774133298897 chr2 26902188 26903889 + 0.335774133298897 NA promoter-TSS (NM_009298) promoter-TSS (NM_009298) -225 NM_009298 20935 Mm.245577 NM_009298 ENSMUSG00000036160 Surf6 D2Wsu129e|Surf-6 surfeit gene 6 protein-coding common_peak2_117_895_0.0247837941705775_9.81974681914289_0.335759646130282 chr12 33429481 33430597 + 0.335759646130282 NA intron (NM_172253, intron 1 of 3) CpG 415 NM_172253 28071 Mm.196472 NM_172253 ENSMUSG00000020561 Twistnb 2410173G11|2810024J17Rik|D16Wsu83e twist basic helix-loop-helix transcription factor 1 neighbor protein-coding common_peak1_40_258_-0.0553650226211291_7.98912577637599_0.335723980652764 chr2 29641218 29641991 + 0.335723980652764 NA intron (NM_054050, intron 1 of 23) RSINE1|SINE|B4 21884 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_40_258_-0.0553650226211291_7.98912577637599_0.335723980652764 chr1 106606147 106607907 + 0.335723980652764 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) -60396 NR_106164 102466254 NR_106164 ENSMUSG00000098344 Mir3473f Gm27846|mmu-mir-3473f microRNA 3473f ncRNA common_peak1_20_116_-0.0928900757849069_6.82391968169095_0.335623886138388-3 chr19 57359751 57360162 + 0.335623886138388 NA intron (NR_040316, intron 1 of 2) intron (NR_040316, intron 1 of 2) 943 NR_040316 320879 Mm.375089 NR_040316 ENSMUSG00000097785 B230217O12Rik - RIKEN cDNA B230217O12 gene ncRNA common_peak1_20_116_-0.0928900757849069_6.82391968169095_0.335623886138388-4 chr3 102723822 102724233 + 0.335623886138388 NA intron (NR_040588, intron 3 of 3) intron (NR_040588, intron 3 of 3) -10743 NM_027533 70747 Mm.27469 NM_027533 ENSMUSG00000027858 Tspan2 6330415F13Rik|B230119D02Rik|tspan-2 tetraspanin 2 protein-coding common_peak1_20_116_-0.0928900757849069_6.82391968169095_0.335623886138388-5 chr7 132610359 132610987 + 0.335623886138388 NA promoter-TSS (NM_029609) promoter-TSS (NM_029609) 30 NM_029609 76429 Mm.276721 NM_029609 ENSMUSG00000030946 Lhpp 2310007H09Rik phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding unique_peak2_20_116_-0.0928900757849069_6.82391968169095_0.335623886138388-3 chr19 46969666 46970687 + 0.335623886138388 NA promoter-TSS (NM_001164365) promoter-TSS (NM_001164365) -609 NM_001164365 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak2_21_110_0.065381876343845_6.82710680452203_0.335623886138388 chr3 52007282 52008111 + 0.335623886138388 NA intron (NM_001004176, intron 1 of 4) CpG 97310 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like 3 (Drosophila) protein-coding common_peak1_20_116_-0.0928900757849069_6.82391968169095_0.335623886138388-2 chr13 44509520 44510008 + 0.335623886138388 NA Intergenic Intergenic 70037 NR_045489 69491 Mm.392410 NR_045489 ENSMUSG00000098144 1700029N11Rik - RIKEN cDNA 1700029N11 gene ncRNA unique_peak2_20_116_-0.0928900757849069_6.82391968169095_0.335623886138388 chr1 161674631 161675622 + 0.335623886138388 NA Intergenic Lx8b|LINE|L1 113369 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_20_116_-0.0928900757849069_6.82391968169095_0.335623886138388 chr7 138909057 138910138 + 0.335623886138388 NA promoter-TSS (NM_009760) promoter-TSS (NM_009760) -91 NM_009760 12176 Mm.378890 NM_009760 ENSMUSG00000078566 Bnip3 Nip3 BCL2/adenovirus E1B interacting protein 3 protein-coding common_peak1_20_116_-0.0928900757849069_6.82391968169095_0.335623886138388 chr10 117975047 117975568 + 0.335623886138388 NA Intergenic Intergenic 49848 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA unique_peak2_20_116_-0.0928900757849069_6.82391968169095_0.335623886138388-2 chr13 107832998 107833908 + 0.335623886138388 NA intron (NM_145456, intron 2 of 14) intron (NM_145456, intron 2 of 14) 56611 NM_145456 67263 Mm.490418 NM_145456 ENSMUSG00000032846 Zswim6 2900036G02Rik|mKIAA1577 zinc finger SWIM-type containing 6 protein-coding common_peak1_21_110_0.065381876343845_6.82710680452203_0.335623886138388 chr15 102376807 102377262 + 0.335623886138388 NA Intergenic Intergenic -10763 NM_130458 170574 Mm.263284 NM_130458 ENSMUSG00000060284 Sp7 6430578P22Rik|C22|Osx Sp7 transcription factor 7 protein-coding common_peak2_263_2476_-0.0172212720264149_11.2657675172332_0.335604397452306 chr14 79480243 79483049 + 0.335604397452306 NA promoter-TSS (NM_018765) promoter-TSS (NM_018765) -378 NM_018765 22380 Mm.476813 NM_018765 ENSMUSG00000022023 Wbp4 AW545037|BB101031|FBP21 WW domain binding protein 4 protein-coding common_peak1_34_197_0.0520890944439243_7.65540116730157_0.335602982890991-2 chr15 80224874 80225499 + 0.335602982890991 NA Intergenic PB1D9|SINE|Alu -8894 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak1_34_197_0.0520890944439243_7.65540116730157_0.335602982890991 chr11 11836579 11837311 + 0.335602982890991 NA intron (NM_016672, intron 8 of 14) intron (NM_016672, intron 8 of 14) -27983 NM_001163360 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding common_peak2_141_1125_0.0227807449531436_10.1483814845568_0.335578726436446 chr18 6135070 6137147 + 0.335578726436446 NA promoter-TSS (NM_029277) promoter-TSS (NM_029277) -10 NM_001039692 75415 Mm.239675 NM_029277 ENSMUSG00000041225 Arhgap12 2810011M08Rik Rho GTPase activating protein 12 protein-coding common_peak1_65_459_-0.0415577920971391_8.82471115489581_0.335544473616768 chr9 55937569 55938589 + 0.335544473616768 NA promoter-TSS (NM_001081341) promoter-TSS (NM_001081341) 36 NM_001081341 244891 Mm.86588 NM_175536 ENSMUSG00000034007 Scaper C430017I08|D530014O03Rik|Zfp291 S phase cyclin A-associated protein in the ER protein-coding common_peak1_48_320_-0.049553250211618_8.30165286201649_0.335499259210137 chr11 107427263 107428120 + 0.335499259210137 NA intron (NM_145823, intron 1 of 9) B3A|SINE|B2 43029 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_33_206_-0.0633383853387981_7.66181776482993_0.335431807056588-2 chr5 105292989 105293756 + 0.335431807056588 NA intron (NM_194336, intron 1 of 10) intron (NM_194336, intron 1 of 10) 327 NM_194336 100702 Mm.491210 NM_194336 ENSMUSG00000079362 Gbp6 AI595338|Mpa2l guanylate binding protein 6 protein-coding common_peak1_33_206_-0.0633383853387981_7.66181776482993_0.335431807056588-3 chr8 57402276 57402939 + 0.335431807056588 NA Intergenic Intergenic -53316 NM_009136 20284 Mm.12886 NM_009136 ENSMUSG00000031610 Scrg1 AW124307 scrapie responsive gene 1 protein-coding common_peak1_33_206_-0.0633383853387981_7.66181776482993_0.335431807056588 chr14 121324528 121325321 + 0.335431807056588 NA intron (NM_145465, intron 2 of 10) intron (NM_145465, intron 2 of 10) 54306 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak2_33_206_-0.0633383853387981_7.66181776482993_0.335431807056588 chr8 45999999 46000687 + 0.335431807056588 NA promoter-TSS (NM_001039562) promoter-TSS (NM_001039562) -493 NM_001039562 654824 Mm.334517 NM_001039562 ENSMUSG00000050914 Ankrd37 - ankyrin repeat domain 37 protein-coding common_peak1_76_527_0.0323274214146121_9.06055783006576_0.335424364637672 chr9 36766798 36767886 + 0.335424364637672 NA intron (NM_008408, intron 1 of 17) intron (NM_008408, intron 1 of 17) 236 NM_008408 16430 Mm.2863 NM_008408 ENSMUSG00000032116 Stt3a AA408947|BB081708|Itm1 STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) protein-coding common_peak2_128_1035_-0.026946601279322_10.0033349870469_0.335316841848116 chr15 41830538 41833386 + 0.335316841848116 NA intron (NM_001130164, intron 1 of 5) intron (NM_001130164, intron 1 of 5) 1004 NM_001130164 170719 Mm.254267 NM_130885 ENSMUSG00000022307 Oxr1 2210416C20Rik|C7|C7B oxidation resistance 1 protein-coding common_peak2_58_379_0.0356707967108782_8.58769100668639_0.335198672199012 chr8 126970302 126971775 + 0.335198672199012 NA promoter-TSS (NM_172762) promoter-TSS (NM_172762) 41 NM_172762 52202 Mm.28199 NM_172762 ENSMUSG00000033931 Rbm34 4930547K05Rik|6330444B11|D8Ertd233e RNA binding motif protein 34 protein-coding common_peak2_67_452_0.0333936433006485_8.84006406169656_0.335167656329644 chr1 167283843 167285639 + 0.335167656329644 NA intron (NM_030724, intron 1 of 6) CpG 386 NM_030724 80914 Mm.280895 NM_030724 ENSMUSG00000026558 Uck2 AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk uridine-cytidine kinase 2 protein-coding common_peak2_181_1529_0.0196414163263885_10.5891366457432_0.335153423697021 chr17 31294639 31297488 + 0.335153423697021 NA promoter-TSS (NM_001242427) promoter-TSS (NM_001242427) -161 NM_001242427 224674 Mm.311395 NM_153062 ENSMUSG00000024036 Slc37a1 G3PP solute carrier family 37 (glycerol-3-phosphate transporter), member 1 protein-coding common_peak1_117_929_-0.0289481897672133_9.84661281111179_0.335118232770103 chr6 56923170 56924530 + 0.335118232770103 NA promoter-TSS (NM_026004) promoter-TSS (NM_026004) 82 NM_026004 107569 Mm.158936 NM_026004 ENSMUSG00000029780 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III protein-coding common_peak1_57_392_-0.0431098765596811_8.59683056397877_0.335021849486084 chr2 24976080 24976809 + 0.335021849486084 NA intron (NM_146251, intron 1 of 34) intron (NM_146251, intron 1 of 34) 411 NM_146251 241274 Mm.389243 NM_146251 ENSMUSG00000036833 Pnpla7 BC027342|E430013P11Rik|Nre patatin-like phospholipase domain containing 7 protein-coding common_peak2_129_1045_-0.0271403047276895_10.0170969838831_0.334985879368057 chr14 21051373 21053209 + 0.334985879368057 NA promoter-TSS (NM_134079) promoter-TSS (NM_134079) 151 NM_018829 55946 Mm.376269 NM_018829 ENSMUSG00000021824 Ap3m1 1200013D09Rik|C78982|R75378 adaptor-related protein complex 3, mu 1 subunit protein-coding common_peak1_108_811_0.0264063183444598_9.67853907635741_0.334968077301454 chr10 39389721 39391364 + 0.334968077301454 NA intron (NM_008054, intron 1 of 13) intron (NM_008054, intron 1 of 13) 20743 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_66_467_-0.0398210194336812_8.85045420986656_0.334945489768888 chr17 25255653 25256816 + 0.334945489768888 NA 5' UTR (NM_001163270, exon 1 of 34) 5' UTR (NM_001163270, exon 1 of 34) 130 NM_001163270 545192 Mm.328859 NM_001163270 ENSMUSG00000047507 Baiap3 Bap3|Gm937 BAI1-associated protein 3 protein-coding common_peak2_42_255_0.0457271702539508_8.02286358512698_0.334921726214629 chr5 33520360 33522127 + 0.334921726214629 NA Intergenic Intergenic -87153 NM_011320 672284 NM_011320 ENSMUSG00000029112 Nkx1-1 Nkx-1.1|Sax2 NK1 transcription factor related, locus 1 (Drosophila) protein-coding common_peak2_87_622_0.029934012042661_9.29805535904533_0.334862855596134 chr12 17710102 17712808 + 0.334862855596134 NA intron (NM_016677, intron 1 of 3) MTC|LTR|ERVL-MaLR 20641 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak1_50_316_0.039331746988049_8.32800490363343_0.334854921299976 chr11 95714093 95715308 + 0.334854921299976 NA Intergenic Intergenic -1946 NR_045780 432396 Mm.426849 NR_045780 ENSMUSG00000086191 Zfp652os 1110035M17Rik zinc finger protein 652, opposite strand ncRNA common_peak1_50_316_0.039331746988049_8.32800490363343_0.334854921299976-3 chr9 31386133 31386807 + 0.334854921299976 NA intron (NM_172766, intron 1 of 25) CpG 278 NM_172766 235134 Mm.238146 NM_172766 ENSMUSG00000042185 Nfrkb A530090G11Rik nuclear factor related to kappa B binding protein protein-coding common_peak1_50_316_0.039331746988049_8.32800490363343_0.334854921299976-2 chr3 89430388 89431212 + 0.334854921299976 NA promoter-TSS (NM_026869) promoter-TSS (NM_026869) -37 NM_026869 68911 Mm.22521 NM_026869 ENSMUSG00000047824 Pygo2 1190004M21Rik pygopus 2 protein-coding common_peak2_156_1274_0.0211941026594289_10.3268785830759_0.334853895382886 chr7 80386231 80388817 + 0.334853895382886 NA intron (NM_010194, intron 1 of 18) intron (NM_010194, intron 1 of 18) 422 NM_010194 14159 Mm.48757 NM_010194 ENSMUSG00000053158 Fes AI586313|BB137047|FPS|c-fes feline sarcoma oncogene protein-coding common_peak1_583_6527_-0.0102693820267987_12.6672906509581_0.334831520757137 chr12 104992515 104998255 + 0.334831520757137 NA intron (NM_172500, intron 1 of 16) intron (NM_172500, intron 1 of 16) 3292 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak2_223_2026_-0.0187286898899046_10.9757660285219_0.334731981601658 chr1 150392171 150394261 + 0.334731981601658 NA promoter-TSS (NM_001077237) promoter-TSS (NM_001077237) -161 NM_145511 226499 Mm.222093 NM_145511 ENSMUSG00000006010 BC003331 1810053E15Rik|Odr4|odr-4 cDNA sequence BC003331 protein-coding common_peak1_107_834_-0.0302001981491085_9.69053228828686_0.334680457409424 chr15 81511241 81512636 + 0.334680457409424 NA Intergenic Intergenic 45622 NM_019712 56438 Mm.29405 NM_019712 ENSMUSG00000022400 Rbx1 1500002P15Rik|AA517855|ROC1 ring-box 1 protein-coding common_peak2_41_266_-0.0566089767026998_8.03239144333621_0.334662490348187 chr1 120264619 120265811 + 0.334662490348187 NA promoter-TSS (NM_133186) promoter-TSS (NM_133186) 65 NM_133186 68428 Mm.181033 NM_133186 ENSMUSG00000026389 Steap3 1010001D01Rik|Tsap6|pHyde STEAP family member 3 protein-coding unique_peak2_41_266_-0.0566089767026998_8.03239144333621_0.334662490348187 chr6 72538112 72539377 + 0.334662490348187 NA Intergenic Intergenic -5647 NM_007599 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_98_720_0.027599014573342_9.50765495652749_0.334610060750135 chr2 150903986 150905465 + 0.334610060750135 NA promoter-TSS (NM_024465) promoter-TSS (NM_024465) 6 NM_024465 76192 Mm.112632 NM_024465 ENSMUSG00000032046 Abhd12 1500011G07Rik|6330583M11Rik|AI431047|AW547313 abhydrolase domain containing 12 protein-coding common_peak1_76_553_-0.0370206252761225_9.09523185341113_0.33460616127154 chr8 10462523 10463798 + 0.33460616127154 NA intron (NM_001081397, intron 21 of 35) intron (NM_001081397, intron 21 of 35) 309237 NM_001081397 244281 Mm.422761 NM_001081397 ENSMUSG00000039057 Myo16 BM140241|C230040D10Rik|Gm1105|NYAP3|mKIAA0865 myosin XVI protein-coding common_peak2_68_460_0.033972379817456_8.86560913033807_0.334581569397426 chr17 33394001 33395405 + 0.334581569397426 NA promoter-TSS (NM_009542) promoter-TSS (NM_009542) -66 NM_009542 22643 Mm.4417 NM_009542 ENSMUSG00000055240 Zfp101 AI316498|AI325003 zinc finger protein 101 protein-coding common_peak1_59_387_0.0353559015969331_8.61759079298559_0.334502194512621 chr10 59972910 59974196 + 0.334502194512621 NA Intergenic B4A|SINE|B4 -21783 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding unique_peak2_35_204_0.0518175735535769_7.70538888628223_0.334439322933844 chr12 85002954 85004551 + 0.334439322933844 NA intron (NM_178363, intron 1 of 20) IAPLTR2_Mm|LTR|ERVK 7431 NM_178363 56531 Mm.153183 NM_178363 ENSMUSG00000021244 Ylpm1 A930013E17Rik|ZAP|Zap3 YLP motif containing 1 protein-coding common_peak1_35_204_0.0518175735535769_7.70538888628223_0.334439322933844 chr4 53228142 53228817 + 0.334439322933844 NA Intergenic Intergenic -17717 NR_040665 78180 Mm.243847 NR_040665 ENSMUSG00000086947 4930522O17Rik - RIKEN cDNA 4930522O17 gene ncRNA common_peak1_196_1732_-0.0199493225348704_10.7490812778927_0.334413240602232 chr18 20895329 20897077 + 0.334413240602232 NA promoter-TSS (NM_029491) promoter-TSS (NM_029491) -125 NM_029491 75964 Mm.273769 NM_029491 ENSMUSG00000033382 Trappc8 5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012 trafficking protein particle complex 8 protein-coding unique_peak2_28_156_0.0540425656209411_7.3216420317021_0.334387578374361-3 chrX 21088663 21089747 + 0.334387578374361 NA promoter-TSS (NM_183185) promoter-TSS (NM_183185) 24 NM_183185 245368 Mm.220470 NM_183185 ENSMUSG00000031079 Zfp300 D930016N04Rik zinc finger protein 300 protein-coding common_peak1_28_156_0.0540425656209411_7.3216420317021_0.334387578374361-2 chr5 139795413 139796062 + 0.334387578374361 NA intron (NM_010757, intron 1 of 2) intron (NM_010757, intron 1 of 2) 4201 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding unique_peak2_28_156_0.0540425656209411_7.3216420317021_0.334387578374361 chr19 5447465 5448867 + 0.334387578374361 NA intron (NM_010235, intron 1 of 3) CpG 468 NM_010235 14283 Mm.6215 NM_010235 ENSMUSG00000024912 Fosl1 AW538199|Fra1|fra-1 fos-like antigen 1 protein-coding common_peak1_28_156_0.0540425656209411_7.3216420317021_0.334387578374361-3 chr7 49759091 49759684 + 0.334387578374361 NA promoter-TSS (NM_001146052) promoter-TSS (NM_001146052) -125 NM_001146052 53415 Mm.20801 NM_016865 ENSMUSG00000039745 Htatip2 AW111545|Cc3|Tip30 HIV-1 Tat interactive protein 2 protein-coding common_peak1_27_163_-0.0709872546001584_7.322058377318_0.334387578374361 chr1 165722861 165723518 + 0.334387578374361 NA Intergenic Intergenic -15095 NM_001038846 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding common_peak2_28_156_0.0540425656209411_7.3216420317021_0.334387578374361-2 chr6 149365784 149367130 + 0.334387578374361 NA Intergenic L1MA4|LINE|L1 -42527 NM_001112796 12121 Mm.177181 NM_009753 ENSMUSG00000003452 Bicd1 B830009D06Rik|bic-D 1 bicaudal D homolog 1 (Drosophila) protein-coding common_peak1_28_156_0.0540425656209411_7.3216420317021_0.334387578374361 chr1 128605466 128606106 + 0.334387578374361 NA Intergenic Intergenic -13487 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding unique_peak2_28_156_0.0540425656209411_7.3216420317021_0.334387578374361-2 chrX 10225165 10226366 + 0.334387578374361 NA Intergenic Lx9|LINE|L1 -8970 NM_011285 19893 Mm.247556 NM_011285 ENSMUSG00000031174 Rpgr Rp3h retinitis pigmentosa GTPase regulator protein-coding common_peak2_28_156_0.0540425656209411_7.3216420317021_0.334387578374361 chr5 36464214 36464979 + 0.334387578374361 NA promoter-TSS (NM_024478) promoter-TSS (NM_024478) 258 NR_126489 76710 Mm.165495 NR_126488 ENSMUSG00000039563 2210406O10Rik - RIKEN cDNA 2210406O10 gene ncRNA common_peak1_27_163_-0.0709872546001584_7.322058377318_0.334387578374361-2 chr5 142444253 142444877 + 0.334387578374361 NA intron (NM_199068, intron 2 of 8) intron (NM_199068, intron 2 of 8) -19366 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding unique_peak1_28_156_0.0540425656209411_7.3216420317021_0.334387578374361 chr8 90445663 90446015 + 0.334387578374361 NA Intergenic Intergenic -97587 NM_172913 244579 Mm.302755 NM_172913 ENSMUSG00000043668 Tox3 500-9|BC052044|C230068E13|CAGF9|Tnrc9 TOX high mobility group box family member 3 protein-coding common_peak2_88_631_0.0292376205870859_9.31839955847065_0.334385570257376 chr17 32992736 32994111 + 0.334385570257376 NA intron (NM_001045559, intron 1 of 3) intron (NM_001045559, intron 1 of 3) 284 NM_001045559 240067 Mm.246667 NM_199020 ENSMUSG00000053390 Zfp952 BC057593|C920016K16Rik zinc finger protein 952 protein-coding common_peak1_88_631_0.0292376205870859_9.31839955847065_0.334385570257376 chrX 108832866 108834293 + 0.334385570257376 NA promoter-TSS (NR_015493) promoter-TSS (NR_015493) 776 NM_001081477 382236 Mm.100112 NM_001081477 ENSMUSG00000063663 Brwd3 Brodl|D030064D06Rik|Gm596 bromodomain and WD repeat domain containing 3 protein-coding common_peak1_15_84_-0.113137673012534_6.35282209963144_0.334340012190691-2 chr11 69077818 69078170 + 0.334340012190691 NA Intergenic B1_Mur2|SINE|Alu 7185 NM_028336 66910 Mm.33964 NM_025838 ENSMUSG00000020895 Tmem107 1110004B13Rik|2810049P21Rik transmembrane protein 107 protein-coding unique_peak2_15_84_-0.113137673012534_6.35282209963144_0.334340012190691-2 chr6 56794961 56795683 + 0.334340012190691 NA intron (NM_145958, intron 1 of 3) intron (NM_145958, intron 1 of 3) 2491 NM_145958 210973 Mm.57295 NM_145958 ENSMUSG00000059486 Kbtbd2 BC022962|Bklhd1|mKIAA1489 kelch repeat and BTB (POZ) domain containing 2 protein-coding common_peak1_15_84_-0.113137673012534_6.35282209963144_0.334340012190691-3 chr19 59248369 59248779 + 0.334340012190691 NA Intergenic Intergenic -12304 NM_172523 214084 Mm.268797 NM_172523 ENSMUSG00000025094 Slc18a2 1110037L13Rik|9330105E13|Vmat2 solute carrier family 18 (vesicular monoamine), member 2 protein-coding unique_peak2_15_84_-0.113137673012534_6.35282209963144_0.334340012190691-3 chrX 75750021 75750709 + 0.334340012190691 NA intron (NR_029443, intron 4 of 8) intron (NR_029443, intron 4 of 8) 14334 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA common_peak1_15_84_-0.113137673012534_6.35282209963144_0.334340012190691 chr10 81770852 81771218 + 0.334340012190691 NA intron (NM_199062, intron 1 of 3).2 CpG 107 NM_199062 331188 Mm.351497 NM_199062 ENSMUSG00000096718 Zfp781 A130081B01 zinc finger protein 781 protein-coding unique_peak2_15_84_-0.113137673012534_6.35282209963144_0.334340012190691 chr10 79901247 79901993 + 0.334340012190691 NA intron (NM_198107, intron 6 of 14) intron (NM_198107, intron 6 of 14) 7318 NM_001163276 216154 Mm.260089 NM_198107 ENSMUSG00000013833 Med16 95kDa|A630083L04|Thrap5|Trap95 mediator complex subunit 16 protein-coding common_peak2_158_1294_0.0211398990224811_10.3493063320852_0.334335113665767 chr6 11906662 11908524 + 0.334335113665767 NA promoter-TSS (NM_010886) promoter-TSS (NM_010886) -147 NM_010886 17992 Mm.415865 NM_010886 ENSMUSG00000029632 Ndufa4 MLRQ NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 protein-coding common_peak1_34_213_-0.0600212718776127_7.71145635046234_0.334279450124107 chr13 113120854 113121502 + 0.334279450124107 NA Intergenic Intergenic -14898 NR_131045 76720 Mm.54263 NR_131045 1700084D21Rik - RIKEN cDNA 1700084D21 gene ncRNA common_peak1_58_401_-0.0455252861371029_8.62828904811038_0.334248280238614 chr17 34952013 34952931 + 0.334248280238614 NA promoter-TSS (NR_015536) promoter-TSS (NR_015536) -1 NR_015536 68763 Mm.28895 NR_015536 ENSMUSG00000092203 1110038B12Rik 0610009C20Rik|0910001G04Rik RIKEN cDNA 1110038B12 gene ncRNA common_peak2_110_830_0.0252135005943508_9.71131141706752_0.334198574475567 chr14 121882510 121885823 + 0.334198574475567 NA intron (NM_026861, intron 1 of 8) B2_Mm2|SINE|B2 -4758 NR_130999 78312 Mm.188743 NR_130999 ENSMUSG00000102112 1810041H14Rik - RIKEN cDNA 1810041H14 gene ncRNA common_peak1_77_562_-0.0374353512860122_9.11827343643722_0.33406214795555 chr5 142629317 142630229 + 0.33406214795555 NA exon (NM_178398, exon 1 of 12) exon (NM_178398, exon 1 of 12) 189 NM_178398 74781 Mm.29432 NM_178398 ENSMUSG00000029578 Wipi2 1110018O08Rik|2510001I10Rik WD repeat domain, phosphoinositide interacting 2 protein-coding common_peak2_69_468_0.034613913194514_8.89075106911263_0.334015267603425 chr4 94555998 94557336 + 0.334015267603425 NA exon (NM_026368, exon 1 of 6) exon (NM_026368, exon 1 of 6) 129 NM_026368 67770 Mm.35170 NM_026368 ENSMUSG00000028578 Caap1 5830433M19Rik|AI536248|CAAP caspase activity and apoptosis inhibitor 1 protein-coding common_peak1_16_80_0.0636862580895476_6.3716931319294_0.333936129996735-6 chrX 151521873 151522277 + 0.333936129996735 NA intron (NM_177201, intron 1 of 18) intron (NM_177201, intron 1 of 18) 1403 NM_001113354 320595 Mm.17156 NM_177201 ENSMUSG00000041229 Phf8 9830141C09Rik|mKIAA1111 PHD finger protein 8 protein-coding common_peak1_16_80_0.0636862580895476_6.3716931319294_0.333936129996735-2 chr2 156361932 156362346 + 0.333936129996735 NA intron (NM_027585, intron 9 of 12) RLTR4_MM-int|LTR|ERV1 30840 NR_024329 347740 Mm.324242 NR_024329 2900097C17Rik 1810005K14Rik|4930563C06Rik RIKEN cDNA 2900097C17 gene ncRNA common_peak1_16_80_0.0636862580895476_6.3716931319294_0.333936129996735-5 chr8 119594383 119594797 + 0.333936129996735 NA intron (NM_026648, intron 8 of 11) intron (NM_026648, intron 8 of 11) 10650 NM_021441 21341 Mm.41977 NM_021441 ENSMUSG00000031832 Taf1c Tafi95|mTAFI95 TATA-box binding protein associated factor, RNA polymerase I, C protein-coding unique_peak2_16_80_0.0636862580895476_6.3716931319294_0.333936129996735-2 chr3 108458527 108459267 + 0.333936129996735 NA intron (NM_001033304, intron 20 of 20) intron (NM_001033304, intron 20 of 20) -13638 NM_001204979 20226 Mm.28688 NM_011319 ENSMUSG00000068739 Sars Sars1|Strs|serRS seryl-aminoacyl-tRNA synthetase protein-coding unique_peak2_16_80_0.0636862580895476_6.3716931319294_0.333936129996735-3 chr5 29920402 29921088 + 0.333936129996735 NA intron (NR_105781, intron 1 of 2) B1_Mus1|SINE|Alu -92369 NM_001314054 16193 Mm.1019 NM_031168 ENSMUSG00000025746 Il6 Il-6 interleukin 6 protein-coding common_peak1_16_80_0.0636862580895476_6.3716931319294_0.333936129996735-3 chr4 62653491 62653926 + 0.333936129996735 NA intron (NM_134257, intron 10 of 15) intron (NM_134257, intron 10 of 15) -20266 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding unique_peak2_16_80_0.0636862580895476_6.3716931319294_0.333936129996735 chr11 4261223 4261909 + 0.333936129996735 NA intron (NM_008501, intron 1 of 3) intron (NM_008501, intron 1 of 3) 3998 NM_008501 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_16_80_0.0636862580895476_6.3716931319294_0.333936129996735 chr14 119006552 119006987 + 0.333936129996735 NA intron (NM_001081252, intron 34 of 38) (CGTG)n|Simple_repeat|Simple_repeat 68837 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding common_peak1_16_80_0.0636862580895476_6.3716931319294_0.333936129996735-4 chr8 71610420 71610775 + 0.333936129996735 NA promoter-TSS (NM_146211) promoter-TSS (NM_146211) -427 NM_146211 234407 Mm.240885 NM_146211 ENSMUSG00000034807 Colgalt1 2810024B22Rik|Glt25d1 collagen beta(1-O)galactosyltransferase 1 protein-coding common_peak1_98_750_-0.0312146337001078_9.53706178066422_0.333931652286173 chr5 113635078 113636426 + 0.333931652286173 NA intron (NM_008153, intron 1 of 2) intron (NM_008153, intron 1 of 2) 14638 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak2_43_263_0.0420159345218529_8.06540208661938_0.33390804464512 chr11 83039495 83040663 + 0.33390804464512 NA promoter-TSS (NR_073523) promoter-TSS (NR_073523) -37 NR_073523 237887 Mm.341645 NM_181542 ENSMUSG00000072621 Slfn10-ps Slfn10|mFLJ00257 schlafen 10, pseudogene pseudo common_peak1_21_122_-0.0827167626452887_6.9011561240166_0.333879276883411 chr6 120193454 120193983 + 0.333879276883411 NA intron (NM_016718, intron 1 of 3) intron (NM_016718, intron 1 of 3) 100338 NM_016718 29862 Mm.103668 NM_016718 ENSMUSG00000041377 Ninj2 - ninjurin 2 protein-coding unique_peak2_21_122_-0.0827167626452887_6.9011561240166_0.333879276883411-2 chr12 12580630 12581592 + 0.333879276883411 NA Intergenic Intergenic -188636 NR_045829 70858 Mm.410838 NR_045829 4921511I17Rik - RIKEN cDNA 4921511I17 gene ncRNA common_peak2_21_122_-0.0827167626452887_6.9011561240166_0.333879276883411 chr12 28675004 28675986 + 0.333879276883411 NA intron (NM_134052, intron 1 of 3) CpG 288 NM_134052 104923 Mm.291504 NM_134052 ENSMUSG00000020629 Adi1 AL024210|Fe-ARD|MTCBP-1|Ni-ARD acireductone dioxygenase 1 protein-coding common_peak2_21_122_-0.0827167626452887_6.9011561240166_0.333879276883411-3 chr6 65525001 65525827 + 0.333879276883411 NA Intergenic Intergenic -64984 NM_001001495 414084 Mm.117558 NM_001001495 ENSMUSG00000044162 Tnip3 9030611K07Rik|ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding unique_peak2_21_122_-0.0827167626452887_6.9011561240166_0.333879276883411 chr10 42897684 42898445 + 0.333879276883411 NA intron (NM_172938, intron 1 of 8) intron (NM_172938, intron 1 of 8) 37552 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak1_21_122_-0.0827167626452887_6.9011561240166_0.333879276883411-2 chr8 70353531 70353990 + 0.333879276883411 NA promoter-TSS (NM_030680) promoter-TSS (NM_030680) -487 NM_001122829 19704 Mm.258280 NM_030680 ENSMUSG00000058301 Upf1 B430202H16Rik|NORF1|PNORF-1|Rent1|Upflp UPF1 regulator of nonsense transcripts homolog (yeast) protein-coding common_peak2_21_122_-0.0827167626452887_6.9011561240166_0.333879276883411-2 chr17 33254536 33255246 + 0.333879276883411 NA intron (NM_029952, intron 1 of 3) intron (NM_029952, intron 1 of 3) 254 NM_029952 77652 Mm.460572 NM_029952 ENSMUSG00000094441 Zfp955a AI842447|Zfp883a zinc finger protein 955A protein-coding common_peak1_50_336_-0.0489340040544022_8.37213777915466_0.333832941273843 chr14 120275704 120276324 + 0.333832941273843 NA intron (NM_175341, intron 1 of 8) intron (NM_175341, intron 1 of 8) 345 NM_175341 105559 Mm.238266 NM_175341 ENSMUSG00000022139 Mbnl2 1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072 muscleblind-like 2 protein-coding common_peak2_42_273_-0.0523049127065764_8.07187962660724_0.333785582322237 chr4 141425074 141426651 + 0.333785582322237 NA TTS (NM_013868) TTS (NM_013868) 5083 NM_013868 29818 Mm.46181 NM_013868 ENSMUSG00000006221 Hspb7 27kDa|Hsp25-2|cvHsp heat shock protein family, member 7 (cardiovascular) protein-coding common_peak1_42_273_-0.0523049127065764_8.07187962660724_0.333785582322237 chr8 11452865 11453530 + 0.333785582322237 NA TTS (NM_011227) TTS (NM_011227) -24732 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak2_68_484_-0.0392456168276958_8.90221812866064_0.333739225663384 chr9 120866174 120867693 + 0.333739225663384 NA Intergenic Intergenic 48317 NR_040742 76402 Mm.436588 NR_040742 ENSMUSG00000100146 1700020M21Rik - RIKEN cDNA 1700020M21 gene ncRNA common_peak1_88_659_-0.0333038454816279_9.349670291505_0.333669318440012 chr17 35125887 35127108 + 0.333669318440012 NA promoter-TSS (NM_033477) promoter-TSS (NM_033477) 95 NM_033477 114585 Mm.42070 NM_033477 ENSMUSG00000043311 D17H6S53E G4|NG34 DNA segment, Chr 17, human D6S53E protein-coding common_peak2_88_659_-0.0333038454816279_9.349670291505_0.333669318440012 chr12 25862693 25865506 + 0.333669318440012 NA Intergenic Intergenic 346406 NR_131149 629481 Mm.390460 NR_131149 Gm29687 - predicted gene, 29687 ncRNA common_peak1_22_117_0.0558177547316685_6.91055192672768_0.333605475580834-2 chr11 95748391 95748863 + 0.333605475580834 NA promoter-TSS (NM_201609) promoter-TSS (NM_201609) -440 NM_201609 268469 Mm.389038 NM_201609 ENSMUSG00000075595 Zfp652 9530033F24Rik|ZNF652 zinc finger protein 652 protein-coding common_peak2_22_117_0.0558177547316685_6.91055192672768_0.333605475580834-2 chr7 126271614 126272413 + 0.333605475580834 NA promoter-TSS (NM_145587) promoter-TSS (NM_145587) -606 NM_145587 104175 Mm.29660 NM_145587 ENSMUSG00000042978 Sbk1 Sbk SH3-binding kinase 1 protein-coding common_peak1_22_117_0.0558177547316685_6.91055192672768_0.333605475580834 chr10 117899430 117899940 + 0.333605475580834 NA Intergenic Intergenic -25774 NR_045342 71067 Mm.410793 NR_045342 4933411E08Rik - RIKEN cDNA 4933411E08 gene ncRNA common_peak1_22_117_0.0558177547316685_6.91055192672768_0.333605475580834-5 chr6 98632571 98632924 + 0.333605475580834 NA Intergenic Intergenic -289993 NM_001128092 330390 Mm.484161 NM_001128092 ENSMUSG00000090667 Gm765 - predicted gene 765 protein-coding common_peak1_22_117_0.0558177547316685_6.91055192672768_0.333605475580834-4 chr2 71832772 71833180 + 0.333605475580834 NA intron (NM_001277970, intron 9 of 24) intron (NM_001277970, intron 9 of 24) -40248 NM_172665 228026 Mm.34411 NM_172665 ENSMUSG00000006494 Pdk1 B830012B01|D530020C15Rik pyruvate dehydrogenase kinase, isoenzyme 1 protein-coding common_peak2_22_117_0.0558177547316685_6.91055192672768_0.333605475580834 chr1 52708109 52708961 + 0.333605475580834 NA exon (NM_178081, exon 2 of 6) exon (NM_178081, exon 2 of 6) 18783 NM_178081 98682 Mm.491173 NM_133829 ENSMUSG00000041439 Mfsd6 2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2 major facilitator superfamily domain containing 6 protein-coding common_peak1_22_117_0.0558177547316685_6.91055192672768_0.333605475580834-3 chr13 40922099 40922636 + 0.333605475580834 NA intron (NM_133219, intron 1 of 2) intron (NM_133219, intron 1 of 2) 4733 NM_133219 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding common_peak1_78_570_-0.0352478442495272_9.13972301323808_0.333593170095694 chr10 12921746 12923106 + 0.333593170095694 NA non-coding (NR_038027, exon 2 of 4) non-coding (NR_038027, exon 2 of 4) 701 NR_038027 320273 Mm.417706 NR_038027 ENSMUSG00000097378 B230208H11Rik - RIKEN cDNA B230208H11 gene ncRNA common_peak2_161_1325_0.0200893340666468_10.3829097271459_0.333561721756545 chr1 127773105 127775320 + 0.333561721756545 NA promoter-TSS (NM_028399) promoter-TSS (NM_028399) 48 NM_028399 72949 Mm.268672 NM_028399 ENSMUSG00000026349 Ccnt2 2900041I18Rik|C81304|CycT2|CycT2a|CycT2b cyclin T2 protein-coding common_peak2_99_759_-0.0306157938218519_9.55454771142002_0.333537607308325 chr5 146793757 146795475 + 0.333537607308325 NA exon (NM_011669, exon 1 of 9) exon (NM_011669, exon 1 of 9) 340 NM_011669 22217 Mm.167971 NM_011669 ENSMUSG00000029640 Usp12 Ubh1 ubiquitin specific peptidase 12 protein-coding common_peak2_99_759_-0.0306157938218519_9.55454771142002_0.333537607308325-2 chr7 12965205 12966597 + 0.333537607308325 NA promoter-TSS (NM_178732) promoter-TSS (NM_178732) 37 NM_178732 243834 Mm.133086 NM_178732 ENSMUSG00000004500 Zfp324 A930002M05|D430030K24Rik|ZF5128 zinc finger protein 324 protein-coding common_peak1_112_848_0.0258987546193623_9.74257012086272_0.33350108383487 chr14 20347331 20348854 + 0.33350108383487 NA promoter-TSS (NM_001024512) promoter-TSS (NM_001024512) 29 NM_027475 70601 Mm.35105 NM_027475 ENSMUSG00000021810 Ecd 5730461K03Rik|Hsgt1 ecdysoneless homolog (Drosophila) protein-coding common_peak2_122_976_-0.0266369707496743_9.91889626659355_0.333462223034758 chr19 5911920 5913568 + 0.333462223034758 NA exon (NM_011262, exon 1 of 11) exon (NM_011262, exon 1 of 11) 127 NM_011262 19708 Mm.2651 NM_011262 ENSMUSG00000024826 Dpf2 2210010M07Rik|BAF45D|Req|ubi-d4 D4, zinc and double PHD fingers family 2 protein-coding common_peak2_70_477_0.0322927378662694_8.91701317691388_0.333400603288168 chr10 67204445 67206298 + 0.333400603288168 NA intron (NM_207221, intron 3 of 25) intron (NM_207221, intron 3 of 25) 19621 NM_001242396 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding common_peak2_189_1613_0.0186572381837866_10.6657534823697_0.33338839106967 chr12 36039063 36043171 + 0.33338839106967 NA intron (NM_025359, intron 1 of 5) intron (NM_025359, intron 1 of 5) 1361 NM_025359 66109 Mm.254663 NM_025359 ENSMUSG00000020577 Tspan13 1100001I23Rik|NET-6|Tm4sf13 tetraspanin 13 protein-coding common_peak1_89_668_-0.0330714518904731_9.36932667469623_0.333224893382894 chr2 27009867 27010603 + 0.333224893382894 NA TTS (NM_001290463) TTS (NM_001290463) 309 NM_001243239 381356 Mm.150270 NM_029862 ENSMUSG00000015488 Cacfd1 5930434B04Rik|mFwe calcium channel flower domain containing 1 protein-coding common_peak2_36_212_0.0450740309855719_7.75724663571862_0.333201796242422 chr5 92042338 92043517 + 0.333201796242422 NA promoter-TSS (NM_001276315) promoter-TSS (NM_001276315) 115 NM_177270 53886 Mm.44963 NM_016912 ENSMUSG00000029403 Cdkl2 5330436L21Rik|AI505225|KKIAMRE|Kkm cyclin-dependent kinase-like 2 (CDC2-related kinase) protein-coding common_peak2_36_212_0.0450740309855719_7.75724663571862_0.333201796242422-2 chr6 83120762 83121593 + 0.333201796242422 NA TTS (NM_023547) TTS (NM_023547) 284 NM_001083923 22377 Mm.1109 NM_016757 ENSMUSG00000030035 Wbp1 AI255152 WW domain binding protein 1 protein-coding common_peak2_44_270_0.0440295962107609_8.10416383945925_0.33306954834954 chr16 13754000 13755316 + 0.33306954834954 NA Intergenic CpG -24174 NM_011987 26565 Mm.4214 NM_011987 ENSMUSG00000022683 Pla2g10 GX sPLA2|PLA2GX|sPLA2-X phospholipase A2, group X protein-coding common_peak2_248_2304_-0.0169106499950686_11.1620957103192_0.33306673128986 chr16 92879812 92885345 + 0.33306673128986 NA Intergenic Intergenic -56504 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_51_344_-0.0484189958382437_8.40624305374641_0.333058773643362 chr11 53792308 53793544 + 0.333058773643362 NA intron (NR_033332, intron 3 of 3) intron (NR_033332, intron 3 of 3) 22453 NM_001159396 16362 Mm.105218 NM_008390 ENSMUSG00000018899 Irf1 AU020929|Irf-1 interferon regulatory factor 1 protein-coding common_peak2_29_163_0.0511044279796193_7.38310421860789_0.332984946316945 chr14 77518827 77519896 + 0.332984946316945 NA intron (NM_172813, intron 7 of 18) intron (NM_172813, intron 7 of 18) -12493 NR_033141 629678 Mm.390721 NM_001037935 ENSMUSG00000067973 Gm6994 EG629678 predicted gene 6994 ncRNA common_peak1_28_170_-0.0691892003733301_7.38325791469923_0.332984946316896-2 chr12 25267420 25268131 + 0.332984946316896 NA Intergenic Intergenic 138601 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_28_170_-0.0691892003733301_7.38325791469923_0.332984946316896-3 chr2 135659521 135660151 + 0.332984946316896 NA Intergenic CpG -76616 NR_015544 320684 Mm.421433 NR_015544 ENSMUSG00000085631 9630028H03Rik - RIKEN cDNA 9630028H03 gene ncRNA common_peak2_28_170_-0.0691892003733301_7.38325791469923_0.332984946316896 chr11 4250581 4251641 + 0.332984946316896 NA Intergenic B3A|SINE|B2 -6457 NM_008501 16878 Mm.4964 NM_008501 ENSMUSG00000034394 Lif - leukemia inhibitory factor protein-coding common_peak1_28_170_-0.0691892003733301_7.38325791469923_0.332984946316896-5 chr4 149659797 149660443 + 0.332984946316896 NA exon (NM_001164051, exon 4 of 24) exon (NM_001164051, exon 4 of 24) 3196 NM_001164052 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_28_170_-0.0691892003733301_7.38325791469923_0.332984946316896 chr1 64690902 64691680 + 0.332984946316896 NA promoter-TSS (NM_001097644) promoter-TSS (NM_001097644) -54 NM_001097644 227210 Mm.39706 NM_001097644 ENSMUSG00000070871 Ccnyl1 9630037P07Rik|AW554339 cyclin Y-like 1 protein-coding common_peak1_28_170_-0.0691892003733301_7.38325791469923_0.332984946316896-4 chr4 137599413 137600048 + 0.332984946316896 NA intron (NM_130879, intron 1 of 27) intron (NM_130879, intron 1 of 27) 5541 NM_130879 170707 Mm.218478 NM_130879 ENSMUSG00000043411 Usp48 2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31 ubiquitin specific peptidase 48 protein-coding common_peak2_60_417_-0.0428396810339109_8.68593929156393_0.332956603820132 chr14 70009908 70011537 + 0.332956603820132 NA intron (NM_028560, intron 4 of 6) Chap1_Mam|DNA|hAT-Charlie -66723 NM_018781 13655 Mm.103737 NM_018781 ENSMUSG00000033730 Egr3 Pilot early growth response 3 protein-coding common_peak1_281_2682_-0.0157534244948643_11.3817546270131_0.332934834152792 chr16 23106719 23108741 + 0.332934834152792 NA non-coding (NR_110335, exon 1 of 12) non-coding (NR_110335, exon 1 of 12) 262 NR_110335 13682 Mm.260084 NM_013506 ENSMUSG00000022884 Eif4a2 4833432N07Rik|BM-010|Ddx2b|Eif4|eIF-4A-II|eIF4A-II eukaryotic translation initiation factor 4A2 protein-coding common_peak1_71_485_0.0330974806395989_8.94136124392558_0.332873153472901 chr11 6527735 6529018 + 0.332873153472901 NA intron (NR_045893, intron 1 of 3) intron (NR_045893, intron 1 of 3) 384 NR_045893 100041286 Mm.459507 NR_045893 ENSMUSG00000085156 Snhg15 Gm11974|OTTMUSG00000005115 small nucleolar RNA host gene 15 ncRNA common_peak2_81_570_0.030708640888939_9.17270125580731_0.332858843271738 chr7 90002012 90004669 + 0.332858843271738 NA Intergenic Intergenic -22364 NM_021876 13626 Mm.380914 NM_021876 ENSMUSG00000030619 Eed ENSMUSG00000039373|l(7)5Rn|l7Rn5|lusk embryonic ectoderm development protein-coding common_peak1_162_1375_-0.0224203107807277_10.4150545993117_0.332846725830195 chr18 77773443 77774800 + 0.332846725830195 NA intron (NM_007505, intron 1 of 11) CpG 353 NM_007505 11946 Mm.276137 NM_007505 ENSMUSG00000025428 Atp5a1 AI035633|AL022851|AL023067|Atpm|D18Ertd206e|Mom2 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 protein-coding common_peak1_43_281_-0.0531412985184865_8.11298070313955_0.332837776976866 chr11 102309111 102309820 + 0.332837776976866 NA exon (NM_001044383, exon 12 of 20) exon (NM_001044383, exon 12 of 20) 7822 NM_001044383 21429 Mm.2845 NM_011551 ENSMUSG00000020923 Ubtf A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1 upstream binding transcription factor, RNA polymerase I protein-coding common_peak1_90_677_-0.0327964204162967_9.3887432529282_0.332792408763825 chr11 11716228 11717747 + 0.332792408763825 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 26810 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_90_677_-0.0327964204162967_9.3887432529282_0.332792408763825-2 chr8 46784204 46785226 + 0.332792408763825 NA intron (NM_008391, intron 1 of 8) ID_B1|SINE|B4 44970 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak2_411_4190_0.0116937000188315_12.03892565614_0.332640944814993 chr6 149306768 149310784 + 0.332640944814993 NA promoter-TSS (NM_026054) promoter-TSS (NM_026054) -638 NM_001289661 67246 Mm.333515 NM_026054 ENSMUSG00000032712 2810474O19Rik 6720435I21Rik|AA536804|AU020969|GET|Kiaa1551 RIKEN cDNA 2810474O19 gene protein-coding common_peak1_137_1123_-0.0252186887877759_10.121816975827_0.33260830421042 chr5 113671735 113673632 + 0.33260830421042 NA Intergenic Intergenic -22293 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak2_92_667_0.0271124284135382_9.39726050668082_0.332603900997077 chr4 148151024 148152664 + 0.332603900997077 NA promoter-TSS (NM_001163704) promoter-TSS (NM_001163704) 81 NM_001163705 50762 Mm.27445 NM_015797 ENSMUSG00000055401 Fbxo6 AA408845|FBG2|Fbs2|Fbx6b|Fbxo6b F-box protein 6 protein-coding common_peak2_80_588_-0.0357817408375816_9.18423295341167_0.332585152995302 chr5 123720086 123721626 + 0.332585152995302 NA exon (NM_027494, exon 1 of 14) exon (NM_027494, exon 1 of 14) 188 NM_027494 70650 Mm.279427 NM_027494 ENSMUSG00000029427 Zcchc8 5730565F05Rik zinc finger, CCHC domain containing 8 protein-coding common_peak1_113_890_-0.0281705907853915_9.78519632612923_0.332543859574737 chr9 77917402 77918505 + 0.332543859574737 NA intron (NM_134255, intron 1 of 7) CpG 588 NM_134255 68801 Mm.430736 NM_134255 ENSMUSG00000032349 Elovl5 1110059L23Rik|AI747313|AU043003|HELO1 ELOVL family member 5, elongation of long chain fatty acids (yeast) protein-coding common_peak1_179_1509_0.0190704257249017_10.5698680470749_0.332541247848166 chr1 58794797 58796639 + 0.332541247848166 NA 5' UTR (NM_009812, exon 1 of 9) 5' UTR (NM_009812, exon 1 of 9) 344 NM_009812 12370 Mm.336851 NM_009812 ENSMUSG00000026029 Casp8 CASP-8|FLICE|MACH|Mch5 caspase 8 protein-coding common_peak2_152_1235_0.0203422653763656_10.2816341605926_0.332524939545335 chr13 60934553 60937839 + 0.332524939545335 NA intron (NM_007796, intron 1 of 4) Lx9|LINE|L1 370 NM_001145799 13024 Mm.482089 NM_007796 ENSMUSG00000044258 Ctla2a Ctla-2a cytotoxic T lymphocyte-associated protein 2 alpha protein-coding common_peak2_206_1839_-0.0187602145442973_10.8361099436722_0.332458627291309 chr17 56032183 56036698 + 0.332458627291309 NA intron (NM_013664, intron 1 of 9) intron (NM_013664, intron 1 of 9) 2197 NM_013664 20405 Mm.1773 NM_013664 ENSMUSG00000003200 Sh3gl1 C77078|EEN|SH3P8|Sh3d2b SH3-domain GRB2-like 1 protein-coding common_peak2_127_990_0.0233489494977484_9.96441572193536_0.332455288909178 chr18 23954109 23955570 + 0.332455288909178 NA 5' UTR (NM_027007, exon 1 of 4) 5' UTR (NM_027007, exon 1 of 4) 151 NM_027007 69256 Mm.218343 NM_027007 ENSMUSG00000024276 Zfp397 2810411K16Rik|6720480F11Rik|AI461664 zinc finger protein 397 protein-coding common_peak2_52_351_-0.0436898531941843_8.4375866920402_0.332410747008834 chr9 49055488 49056350 + 0.332410747008834 NA intron (NM_012039, intron 1 of 15) intron (NM_012039, intron 1 of 15) 338 NM_012039 26951 Mm.24791 NM_012039 ENSMUSG00000032264 Zw10 6330566F14Rik|MmZw10 zw10 kinetochore protein protein-coding common_peak2_82_579_0.0295967791534135_9.19470747959164_0.332369566602634 chr19 10894674 10896251 + 0.332369566602634 NA exon (NM_001253843, exon 1 of 16) exon (NM_001253843, exon 1 of 16) 231 NM_001253843 28000 Mm.491104 NM_134129 ENSMUSG00000024735 Prpf19 AA617263|AL024362|D19Wsu55e|NMP200|PSO4|Prp19|Snev pre-mRNA processing factor 19 protein-coding common_peak1_322_3105_0.013254331604017_11.6074692801893_0.332349429914009 chr1 181841063 181843503 + 0.332349429914009 NA intron (NM_133815, intron 1 of 13) CpG 118 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_61_425_-0.0414151043051749_8.71400206807325_0.332347717899324 chr15 79074817 79075855 + 0.332347717899324 NA intron (NM_145139, intron 1 of 12) CpG 113 NM_145139 223691 Mm.206404 NM_145139 ENSMUSG00000033047 Eif3l 0610011H21Rik|D15N1e|Eif3eip|Eif3ip|Eif3s6ip|HSP-66Y|PAF67 eukaryotic translation initiation factor 3, subunit L protein-coding common_peak1_72_494_0.0310343114186562_8.9668018706763_0.332299948865319 chr1 37495656 37496580 + 0.332299948865319 NA intron (NM_001290801, intron 2 of 14) intron (NM_001290801, intron 2 of 14) -7513 NR_024017 77633 Mm.483177 NR_024017 ENSMUSG00000103948 4930594C11Rik - G1 to S phase transition pseudogene pseudo common_peak2_114_899_-0.0272148002452077_9.80017379109443_0.332225529118687 chr14 79426450 79427778 + 0.332225529118687 NA exon (NM_001024135, exon 1 of 1) exon (NM_001024135, exon 1 of 1) 603 NM_001024135 211255 Mm.284526 NM_001024135 ENSMUSG00000043881 Kbtbd7 1110008P08Rik|AU045792|Gm295 kelch repeat and BTB (POZ) domain containing 7 protein-coding common_peak1_37_219_0.0456168010585865_7.80416811405395_0.332191809009178 chr14 66185124 66185846 + 0.332191809009178 NA intron (NM_172498, intron 5 of 29) intron (NM_172498, intron 5 of 29) 28067 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_37_219_0.0456168010585865_7.80416811405395_0.332191809009178 chr13 115171122 115172425 + 0.332191809009178 NA Intergenic Intergenic -69809 NM_001033228 109700 Mm.317280 NM_001033228 ENSMUSG00000042284 Itga1 CD49A|E130012M19Rik|Vla1 integrin alpha 1 protein-coding common_peak1_37_219_0.0456168010585865_7.80416811405395_0.332191809009178-2 chr5 21211833 21212621 + 0.332191809009178 NA intron (NM_175437, intron 5 of 30) intron (NM_175437, intron 5 of 30) 25960 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak2_81_596_-0.0335315450130231_9.20482134875829_0.332156906073434 chr5 143403291 143404746 + 0.332156906073434 NA exon (NM_025841, exon 1 of 5) exon (NM_025841, exon 1 of 5) 198 NM_025841 66913 Mm.181880 NM_025841 ENSMUSG00000079111 Kdelr2 1110007A14Rik KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 protein-coding common_peak1_71_509_-0.0364434526134794_8.97613171055212_0.332113439277163 chr19 60895616 60896465 + 0.332113439277163 NA intron (NM_018869, intron 1 of 15) intron (NM_018869, intron 1 of 15) 6291 NM_018869 14773 Mm.279400 NM_018869 ENSMUSG00000003228 Grk5 Gprk5 G protein-coupled receptor kinase 5 protein-coding unique_peak2_16_90_-0.104258379224524_6.45566545058643_0.332055252013198-2 chr14 78950463 78951125 + 0.332055252013198 NA intron (NM_173758, intron 12 of 25) Lx9|LINE|L1 101616 NM_173758 219189 Mm.159651 NM_027906 ENSMUSG00000058997 Vwa8 1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564 von Willebrand factor A domain containing 8 protein-coding common_peak1_16_90_-0.104258379224524_6.45566545058643_0.332055252013198-2 chr13 12575088 12575471 + 0.332055252013198 NA intron (NM_026184, intron 2 of 15) intron (NM_026184, intron 2 of 15) 9396 NM_026184 67475 Mm.358706 NM_026184 ENSMUSG00000057069 Ero1lb 1300013B24Rik|1700065B09Rik|AI447560|Ero1b|ero1-beta ERO1-like beta (S. cerevisiae) protein-coding common_peak1_16_90_-0.104258379224524_6.45566545058643_0.332055252013198 chr11 54728623 54729062 + 0.332055252013198 NA intron (NM_178626, intron 3 of 5) intron (NM_178626, intron 3 of 5) 58861 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding common_peak1_16_90_-0.104258379224524_6.45566545058643_0.332055252013198-3 chr5 5418963 5419367 + 0.332055252013198 NA Intergenic Intergenic -38914 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding unique_peak2_16_90_-0.104258379224524_6.45566545058643_0.332055252013198 chr1 51473105 51474009 + 0.332055252013198 NA intron (NM_001310548, intron 3 of 5) intron (NM_001310548, intron 3 of 5) 4842 NM_028696 109019 Mm.196290 NM_028696 ENSMUSG00000026107 Nabp1 4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2 nucleic acid binding protein 1 protein-coding unique_peak2_16_90_-0.104258379224524_6.45566545058643_0.332055252013198-3 chr2 122206833 122207480 + 0.332055252013198 NA TTS (NM_028914) TTS (NM_028914) 20884 NM_028914 74401 Mm.374834 NM_028914 ENSMUSG00000027229 Terb2 4933406J08Rik telomere repeat binding bouquet formation protein 2 protein-coding common_peak1_22_129_-0.0839070089349443_6.98041430856098_0.332053961687138-2 chr3 51652806 51653379 + 0.332053961687138 NA Intergenic Intergenic -8087 NM_174995 211666 Mm.24679 NM_174995 ENSMUSG00000074604 Mgst2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding common_peak2_22_129_-0.0839070089349443_6.98041430856098_0.332053961687138 chr1 137898412 137899160 + 0.332053961687138 NA Intergenic Intergenic -67669 NR_029795 735252 NR_029795 ENSMUSG00000065565 Mir181a-1 Mirn181a-1|Mirn213|miR-213|mir-181a-1|mmu-mir-213 microRNA 181a-1 ncRNA unique_peak2_23_123_0.0595791577052198_6.98398588923948_0.332053961687138-3 chr16 18088682 18089687 + 0.332053961687138 NA promoter-TSS (NM_011172) promoter-TSS (NM_011172) 6 NM_011172 19125 Mm.28456 NM_011172 ENSMUSG00000003526 Prodh Pro-1|Pro1|Ym24d07 proline dehydrogenase protein-coding common_peak1_22_129_-0.0839070089349443_6.98041430856098_0.332053961687138 chr11 54963011 54963486 + 0.332053961687138 NA promoter-TSS (NM_001199276) promoter-TSS (NM_001199276) -308 NM_001271455 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding unique_peak2_23_123_0.0595791577052198_6.98398588923948_0.332053961687138 chr11 118199647 118200537 + 0.332053961687138 NA intron (NM_011180, intron 1 of 12) intron (NM_011180, intron 1 of 12) 12650 NM_001112700 19157 Mm.86413 NM_011180 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|Pscd1 cytohesin 1 protein-coding unique_peak2_23_123_0.0595791577052198_6.98398588923948_0.332053961687138-2 chr13 24622020 24622845 + 0.332053961687138 NA intron (NM_178658, intron 1 of 13) intron (NM_178658, intron 1 of 13) 7826 NM_178658 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_23_123_0.0595791577052198_6.98398588923948_0.332053961687138 chr1 86261900 86262453 + 0.332053961687138 NA intron (NM_001310702, intron 23 of 24) intron (NM_001310702, intron 23 of 24) -41045 NM_145222 227327 Mm.86467 NM_145222 ENSMUSG00000079445 B3gnt7 C330001H22Rik|beta-3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding common_peak2_36_228_-0.0594201368855334_7.80949371965418_0.33205267894795 chr5 99252147 99253024 + 0.33205267894795 NA intron (NM_181318, intron 1 of 13) CpG 342 NM_181318 320292 Mm.259074 NM_145839 ENSMUSG00000089809 Rasgef1b 4732452O09Rik|GPIgamma4|Gpig4 RasGEF domain family, member 1B protein-coding common_peak1_36_228_-0.0594201368855334_7.80949371965418_0.33205267894795 chr11 82746811 82747494 + 0.33205267894795 NA intron (NM_009839, intron 5 of 13) intron (NM_009839, intron 5 of 13) 17169 NM_009839 12467 Mm.4126 NM_009839 ENSMUSG00000020698 Cct6b CCT-zeta-2|CCTzeta-2|Cctz-2|TCP-1-zeta-2 chaperonin containing Tcp1, subunit 6b (zeta) protein-coding common_peak1_36_228_-0.0594201368855334_7.80949371965418_0.33205267894795-2 chr14 25639978 25640498 + 0.33205267894795 NA intron (NM_001310666, intron 7 of 23) B1_Mur1|SINE|Alu 36725 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak1_44_288_-0.0487470449360465_8.15055216003265_0.33205233285542-2 chr8 22593944 22594475 + 0.33205233285542 NA promoter-TSS (NM_001198998) promoter-TSS (NM_001198998) -396 NM_011696 22335 Mm.227704 NM_011696 ENSMUSG00000008892 Vdac3 - voltage-dependent anion channel 3 protein-coding common_peak2_44_288_-0.0487470449360465_8.15055216003265_0.33205233285542 chr8 77517191 77518605 + 0.33205233285542 NA promoter-TSS (NM_030113) promoter-TSS (NM_030113) 9 NM_030113 78514 Mm.165974 NM_030113 ENSMUSG00000037148 Arhgap10 A930033B01Rik|PSGAP-m|PSGAP-s Rho GTPase activating protein 10 protein-coding common_peak1_44_288_-0.0487470449360465_8.15055216003265_0.33205233285542 chr1 54896749 54897817 + 0.33205233285542 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 29104 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_63_419_0.0352323678317568_8.731861701582_0.331978819367733 chr15 100303716 100305443 + 0.331978819367733 NA promoter-TSS (NM_027334) promoter-TSS (NM_027334) -238 NM_027334 70152 Mm.488086 NM_027334 ENSMUSG00000054619 Mettl7a1 2210414H16Rik|3300001H21Rik|Aam-B|Mettl7a|UbiE1 methyltransferase like 7A1 protein-coding common_peak2_54_347_0.0383475225371868_8.46211725711732_0.33187581154602 chr18 77139482 77141234 + 0.33187581154602 NA intron (NM_001164167, intron 11 of 13) intron (NM_001164167, intron 11 of 13) -45489 NM_153124 225742 Mm.365178 NM_013666 ENSMUSG00000025425 St8sia5 ST8SiaV|Siat8e ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 protein-coding common_peak1_54_347_0.0383475225371868_8.46211725711732_0.33187581154602 chr17 56934653 56935545 + 0.33187581154602 NA intron (NM_022328, intron 1 of 11) CpG 289 NM_022328 64144 Mm.148748 NM_022328 ENSMUSG00000024212 Mllt1 AA407901|BAM11|ENL|LTG19 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1 protein-coding common_peak2_54_347_0.0383475225371868_8.46211725711732_0.33187581154602-2 chr8 123442806 123443854 + 0.33187581154602 NA promoter-TSS (NM_001281803) promoter-TSS (NM_001281803) 71 NM_001281803 23854 Mm.275127 NM_054046 ENSMUSG00000001482 Def8 AI449518|D8Ertd713e|DEF-8 differentially expressed in FDCP 8 protein-coding common_peak1_17_86_0.0617418660239393_6.4738144288607_0.33170459031519-4 chr14 71113222 71113644 + 0.33170459031519 NA Intergenic Lx5b|LINE|L1 -137840 NR_046075 100043132 Mm.399336 NR_046075 Gm4251 - predicted gene 4251 ncRNA unique_peak2_17_86_0.0617418660239393_6.4738144288607_0.33170459031519 chr1 13294661 13295461 + 0.33170459031519 NA intron (NM_008678, intron 1 of 22) intron (NM_008678, intron 1 of 22) 77368 NM_001302702 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding unique_peak2_17_86_0.0617418660239393_6.4738144288607_0.33170459031519-2 chr5 125441528 125442119 + 0.33170459031519 NA exon (NM_029752, exon 1 of 3) exon (NM_029752, exon 1 of 3) 255 NM_029752 76809 Mm.290720 NM_029752 ENSMUSG00000037905 Bri3bp 2410150I18Rik|AI841257|AW742481 Bri3 binding protein protein-coding common_peak1_17_86_0.0617418660239393_6.4738144288607_0.33170459031519-3 chr12 16582233 16582679 + 0.33170459031519 NA intron (NM_172950, intron 1 of 19) intron (NM_172950, intron 1 of 19) 7314 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak1_17_86_0.0617418660239393_6.4738144288607_0.33170459031519-6 chr7 127480285 127480803 + 0.33170459031519 NA Intergenic L2c|LINE|L2 -4677 NM_010183 14123 Mm.323505 NM_010183 ENSMUSG00000042423 Fbrs Fbs|Fbs1 fibrosin protein-coding common_peak1_17_86_0.0617418660239393_6.4738144288607_0.33170459031519-5 chr3 30599544 30599953 + 0.33170459031519 NA exon (NM_029690, exon 1 of 2) exon (NM_029690, exon 1 of 2) 122 NM_029690 76652 Mm.116928 NM_029690 ENSMUSG00000037737 Actrt3 1700119I24Rik|ARP-T3|Arpm1 actin related protein T3 protein-coding common_peak1_17_86_0.0617418660239393_6.4738144288607_0.33170459031519-7 chrX 59567839 59568279 + 0.33170459031519 NA intron (NM_001290414, intron 1 of 6) CpG 17513 NM_001290414 14168 Mm.7995 NM_010200 ENSMUSG00000031137 Fgf13 Fhf2 fibroblast growth factor 13 protein-coding common_peak1_17_86_0.0617418660239393_6.4738144288607_0.33170459031519-2 chr11 34736692 34737140 + 0.33170459031519 NA intron (NM_033374, intron 2 of 51) intron (NM_033374, intron 2 of 51) 46989 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding common_peak2_17_86_0.0617418660239393_6.4738144288607_0.33170459031519 chr15 79414595 79415270 + 0.33170459031519 NA Intergenic Intergenic -11629 NM_172608 223693 Mm.323358 NM_172608 ENSMUSG00000009035 Tmem184b 2610507A11|4732495E13Rik transmembrane protein 184b protein-coding common_peak1_17_86_0.0617418660239393_6.4738144288607_0.33170459031519 chr11 6391765 6392193 + 0.33170459031519 NA Intergenic Intergenic -3146 NM_001005867 52915 Mm.1144 NM_028601 ENSMUSG00000041164 Zmiz2 Zimp7 zinc finger, MIZ-type containing 2 protein-coding common_peak1_53_359_-0.043033218303723_8.47033648717781_0.33170152977631 chr11 87733786 87734649 + 0.33170152977631 NA 3' UTR (NM_172448, exon 10 of 10) 3' UTR (NM_172448, exon 10 of 10) -3348 NM_009296 20922 Mm.622 NM_009296 ENSMUSG00000020485 Supt4a AL022777|Supt4h|Supt4h1|Supt4h1a suppressor of Ty 4A protein-coding unique_peak2_30_170_0.0488296898484082_7.4422673598101_0.331695518978596-3 chr6 72597851 72599070 + 0.331695518978596 NA promoter-TSS (NM_001253692) promoter-TSS (NM_001253692) -47 NM_001253692 232089 Mm.167232 NM_144917 ENSMUSG00000056698 Elmod3 AI844780|C330008I15Rik|RBM29|Rbed1 ELMO/CED-12 domain containing 3 protein-coding common_peak1_29_177_-0.0670769983686945_7.44219493178205_0.331695518978596 chr10 18139492 18140022 + 0.331695518978596 NA intron (NM_001195036, intron 17 of 20) intron (NM_001195036, intron 17 of 20) 71133 NM_001195036 100045792 Mm.380617 NM_001195036 ENSMUSG00000071392 Ect2l C330021H03Rik|ENSMUSG00000071392|Gm10331 epithelial cell transforming sequence 2 oncogene-like protein-coding common_peak1_29_177_-0.0670769983686945_7.44219493178205_0.331695518978596-2 chr5 66069475 66070158 + 0.331695518978596 NA intron (NM_001291226, intron 2 of 5) intron (NM_001291226, intron 2 of 5) 28363 NM_139065 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding common_peak2_30_170_0.0488296898484082_7.4422673598101_0.331695518978596 chr6 85587366 85588234 + 0.331695518978596 NA exon (NM_145223, exon 1 of 23) exon (NM_145223, exon 1 of 23) 269 NM_145223 236266 Mm.246967 NM_145223 ENSMUSG00000063810 Alms1 bbb Alstrom syndrome 1 protein-coding common_peak1_30_170_0.0488296898484082_7.4422673598101_0.331695518978596 chr8 125569941 125570558 + 0.331695518978596 NA Intergenic CpG -14389 NR_015535 75930 Mm.195663 NR_015535 ENSMUSG00000110629 4930567H12Rik 4930579P07Rik RIKEN cDNA 4930567H12 gene ncRNA common_peak2_30_170_0.0488296898484082_7.4422673598101_0.331695518978596-2 chr8 125569967 125570621 + 0.331695518978596 NA Intergenic CpG -14344 NR_015535 75930 Mm.195663 NR_015535 ENSMUSG00000110629 4930567H12Rik 4930579P07Rik RIKEN cDNA 4930567H12 gene ncRNA unique_peak2_30_170_0.0488296898484082_7.4422673598101_0.331695518978596-2 chr2 24365645 24366600 + 0.331695518978596 NA Intergenic Intergenic -19275 NM_177611 215632 Mm.490434 NM_177611 ENSMUSG00000026979 Psd4 BC046518|EFA6B pleckstrin and Sec7 domain containing 4 protein-coding unique_peak2_30_170_0.0488296898484082_7.4422673598101_0.331695518978596 chr11 98532354 98533381 + 0.331695518978596 NA intron (NM_011771, intron 1 of 7) B3|SINE|B2 13164 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding common_peak2_364_3610_0.0122419083153087_11.8243036591063_0.331691812590379 chr8 88695857 88698840 + 0.331691812590379 NA intron (NM_173369, intron 1 of 16) CpG 320 NM_001128171 74256 Mm.490395 NM_173369 ENSMUSG00000036712 Cyld 2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849 CYLD lysine 63 deubiquitinase protein-coding common_peak1_198_1709_0.0172011840741568_10.7483812018103_0.331582315739292 chr10 41886885 41888418 + 0.331582315739292 NA intron (NM_001013370, intron 1 of 9) CpG 212 NM_001013370 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding unique_peak2_11_59_-0.119727438702779_5.84702687625713_0.331513058069911 chr2 177498113 177498652 + 0.331513058069911 NA intron (NR_036450, intron 1 of 4) RMER17B|LTR|ERVK 156 NR_036450 433520 Mm.425117 NM_001024825 Gm14403 OTTMUSG00000016571 predicted gene 14403 ncRNA common_peak1_11_59_-0.119727438702779_5.84702687625713_0.331513058069911 chr13 93072910 93073322 + 0.331513058069911 NA promoter-TSS (NR_036451) promoter-TSS (NR_036451) -188 NR_036451 100502942 Mm.441946 NM_177623 Gm4814 C920025J10|EG218444 predicted gene 4814 ncRNA common_peak2_184_1561_0.0187104999477512_10.6185339881159_0.331498543479223 chr15 63996840 63999221 + 0.331498543479223 NA intron (NM_144846, intron 1 of 11) CpG 62418 NM_144846 223601 Mm.246108 NM_144846 ENSMUSG00000022378 Fam49b 0910001A06Rik|AW122079 family with sequence similarity 49, member B protein-coding common_peak2_84_597_0.0276401736543868_9.2378217610253_0.331434795390409 chr14 70791681 70793979 + 0.331434795390409 NA Intergenic Intergenic 18449 NM_010071 13449 Mm.243323 NM_010071 ENSMUSG00000022102 Dok2 DokR|Frip docking protein 2 protein-coding common_peak1_95_694_0.0261309228539375_9.45393462903784_0.331387746434319 chr15 77815523 77817043 + 0.331387746434319 NA intron (NM_022410, intron 1 of 40) intron (NM_022410, intron 1 of 40) 25892 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak2_212_1904_-0.0182812203803842_10.8864346721905_0.331379162747196 chr11 87460586 87463631 + 0.331379162747196 NA intron (NM_031386, intron 2 of 30) CpG 34517 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak2_46_286_0.03822416075033_8.18401900705085_0.33130474611927 chr4 150216113 150217244 + 0.33130474611927 NA Intergenic Intergenic -15543 NM_009802 12353 Mm.232523 NM_009802 ENSMUSG00000028972 Car6 Ca6|DOC1 carbonic anhydrase 6 protein-coding common_peak1_46_286_0.03822416075033_8.18401900705085_0.33130474611927 chr11 58097640 58098449 + 0.33130474611927 NA Intergenic CpG -6109 NM_026949 69125 Mm.28910 NM_026949 ENSMUSG00000020515 Cnot8 1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059 CCR4-NOT transcription complex, subunit 8 protein-coding common_peak1_183_1593_-0.0201381763378929_10.6283668258215_0.331286752665837 chr12 76764934 76766430 + 0.331286752665837 NA intron (NM_206534, intron 1 of 3) CpG 109 NM_206534 211151 Mm.80970 NM_206534 ENSMUSG00000090258 Churc1 1700030P15Rik|My015|chch churchill domain containing 1 protein-coding common_peak1_171_1427_0.019171528597564_10.4893660283279_0.331252541748221 chr9 85326162 85328682 + 0.331252541748221 NA promoter-TSS (NM_001160378) promoter-TSS (NM_001160378) -272 NM_001160379 212943 Mm.74610 NM_001160378 ENSMUSG00000032265 Fam46a BAP014|D930050G01Rik family with sequence similarity 46, member A protein-coding common_peak1_38_226_0.0463949623169455_7.84974596844939_0.331243308857406-3 chr2 43748276 43748750 + 0.331243308857406 NA promoter-TSS (NM_153820) promoter-TSS (NM_153820) -311 NM_001301832 76117 Mm.217350 NM_153820 ENSMUSG00000049744 Arhgap15 5830480G12Rik Rho GTPase activating protein 15 protein-coding common_peak1_38_226_0.0463949623169455_7.84974596844939_0.331243308857406-2 chr15 60096642 60097317 + 0.331243308857406 NA Intergenic MT2B|LTR|ERVL -80361 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_38_226_0.0463949623169455_7.84974596844939_0.331243308857406 chr11 118461302 118462027 + 0.331243308857406 NA Intergenic RSINE1|SINE|B4 -6669 NR_045902 100126224 Mm.441989 NR_045902 ENSMUSG00000086514 Gm11747 OTTMUSG00000003972 predicted gene 11747 ncRNA common_peak2_144_1156_0.0205957522834002_10.1864710252492_0.331225878023784 chr11 98508580 98511771 + 0.331225878023784 NA intron (NM_011771, intron 3 of 7) intron (NM_011771, intron 3 of 7) 35856 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding common_peak2_63_441_-0.0384246738935516_8.76869022244466_0.331197061855861 chr5 147894051 147895744 + 0.331197061855861 NA promoter-TSS (NM_027872) promoter-TSS (NM_027872) -95 NM_027872 71706 Mm.153218 NM_027872 ENSMUSG00000029650 Slc46a3 1200006F02Rik solute carrier family 46, member 3 protein-coding common_peak2_94_713_-0.0313104737538872_9.46412502715216_0.331172741128485 chr10 14056601 14059464 + 0.331172741128485 NA intron (NM_010437, intron 1 of 8) intron (NM_010437, intron 1 of 8) 91653 NM_010437 15273 Mm.42157 NM_010437 ENSMUSG00000015501 Hivep2 Gm20114|MIBP1|Schnurri-2|Shn-2 human immunodeficiency virus type I enhancer binding protein 2 protein-coding common_peak1_94_713_-0.0313104737538872_9.46412502715216_0.331172741128485 chr11 40694219 40695210 + 0.331172741128485 NA intron (NM_001199274, intron 1 of 6) intron (NM_001199274, intron 1 of 6) 489 NM_001199274 108645 Mm.293771 NM_134017 ENSMUSG00000042032 Mat2b 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR methionine adenosyltransferase II, beta protein-coding common_peak1_263_2422_0.014578191768603_11.2498677853356_0.331172137806168 chr2 168205517 168207899 + 0.331172137806168 NA 5' UTR (NM_009628, exon 1 of 4) 5' UTR (NM_009628, exon 1 of 4) 404 NM_009628 11538 Mm.201322 NM_009628 ENSMUSG00000051149 Adnp AA589558|mKIAA0784 activity-dependent neuroprotective protein protein-coding common_peak1_119_915_0.0226772668734725_9.85054242153368_0.331143966260909 chr5 148678550 148680064 + 0.331143966260909 NA Intergenic RMER1C|Other|Other -62533 NR_028285 70138 Mm.417834 NR_028285 ENSMUSG00000086494 2210417A02Rik AV081004 RIKEN cDNA 2210417A02 gene ncRNA common_peak2_54_367_-0.0422709376710966_8.50242648722146_0.331023662221985 chr5 93096933 93099098 + 0.331023662221985 NA intron (NM_001310669, intron 1 of 10) intron (NM_001310669, intron 1 of 10) 4599 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding unique_peak2_54_367_-0.0422709376710966_8.50242648722146_0.331023662221985 chr17 47514304 47516708 + 0.331023662221985 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) 10455 NM_001081635 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_132_1039_0.0215324996339064_10.0331340628454_0.330985242134449 chr5 130170905 130171754 + 0.330985242134449 NA promoter-TSS (NM_001199059) promoter-TSS (NM_001199059) -490 NM_001199059 56715 Mm.288639 NM_019983 ENSMUSG00000025340 Rabgef1 Rab5ef|Rabex5|Rin2 RAB guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_187_1593_0.0179197958082593_10.6473958118946_0.330890493834254 chr11 54786206 54788109 + 0.330890493834254 NA intron (NM_178626, intron 1 of 5) CpG 546 NM_178626 72729 Mm.29476 NM_178626 ENSMUSG00000052298 Cdc42se2 2810404F18Rik|AA408783|AA536669|SPEC2 CDC42 small effector 2 protein-coding common_peak1_108_812_0.0246306934546094_9.67942688880233_0.330840130670813 chr6 122825418 122826869 + 0.330840130670813 NA intron (NM_021899, intron 1 of 10) intron (NM_021899, intron 1 of 10) -5234 NR_106090 102465710 NR_106090 ENSMUSG00000106580 Mir7231 mmu-mir-7231 microRNA 7231 ncRNA common_peak2_75_519_0.031221012741149_9.03797831939903_0.330810837018635 chr4 137852854 137855261 + 0.330810837018635 NA Intergenic Intergenic -8180 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding common_peak2_65_436_0.0324427893466375_8.78771086417392_0.330787069045615 chr19 41282134 41283849 + 0.330787069045615 NA intron (NM_031376, intron 15 of 16) L1MB5|LINE|L1 -18987 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak1_158_1333_-0.0216666695881873_10.3707096163905_0.330644966249458 chr2 173218091 173219741 + 0.330644966249458 NA promoter-TSS (NM_001139519) promoter-TSS (NM_001139519) 6 NM_021394 58203 Mm.116687 NM_021394 ENSMUSG00000027514 Zbp1 2010010H03Rik|Dai|Dlm1|mZaDLM Z-DNA binding protein 1 protein-coding common_peak2_158_1333_-0.0216666695881873_10.3707096163905_0.330644966249458 chr10 18006584 18010849 + 0.330644966249458 NA Intergenic Intergenic 14536 NM_028440 73112 Mm.276041 NM_028440 ENSMUSG00000078453 Abracl 1700028I04Rik|3110003A17Rik ABRA C-terminal like protein-coding common_peak1_23_135_-0.0736873731582444_7.05061915467122_0.330643532748592-2 chr6 70830728 70831275 + 0.330643532748592 NA Intergenic Intergenic -13514 NM_010121 13666 Mm.247167 NM_010121 ENSMUSG00000031668 Eif2ak3 Pek|Perk eukaryotic translation initiation factor 2 alpha kinase 3 protein-coding common_peak2_23_135_-0.0736873731582444_7.05061915467122_0.330643532748592-3 chr2 30942274 30942986 + 0.330643532748592 NA Intergenic Intergenic -10371 NM_133673 30934 Mm.249164 NM_133673 ENSMUSG00000026848 Tor1b 2610016F05Rik|DQ1|torsinB torsin family 1, member B protein-coding common_peak2_23_135_-0.0736873731582444_7.05061915467122_0.330643532748592-2 chr18 5591128 5591799 + 0.330643532748592 NA promoter-TSS (NM_011546) promoter-TSS (NM_011546) -397 NM_011546 21417 Mm.3929 NM_011546 ENSMUSG00000024238 Zeb1 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1 zinc finger E-box binding homeobox 1 protein-coding common_peak1_23_135_-0.0736873731582444_7.05061915467122_0.330643532748592 chr19 33101523 33101992 + 0.330643532748592 NA Intergenic Intergenic 290538 NM_001167818 67795 Mm.204591 NM_001146342 ENSMUSG00000071573 Rnls 6530404N21Rik|AI452315|AW060440|C10orf59 renalase, FAD-dependent amine oxidase protein-coding common_peak2_23_135_-0.0736873731582444_7.05061915467122_0.330643532748592 chr10 62577808 62578543 + 0.330643532748592 NA exon (NM_028197, exon 1 of 7) exon (NM_028197, exon 1 of 7) 282 NM_028197 72320 Mm.258955 NM_028197 ENSMUSG00000036955 Kif1bp 0710007C18Rik|2510003E04Rik|KBP|mKIAA1279 KIF1 binding protein protein-coding common_peak1_97_712_0.0257302816531517_9.49062340727047_0.330627722787879-2 chr7 141466722 141467887 + 0.330627722787879 NA promoter-TSS (NM_001111049) promoter-TSS (NM_001111049) -58 NM_009842 12476 Mm.30246 NM_009842 ENSMUSG00000025510 Cd151 PETA-3|SFA-1|Tspan24 CD151 antigen protein-coding common_peak1_97_712_0.0257302816531517_9.49062340727047_0.330627722787879 chr7 66225011 66226842 + 0.330627722787879 NA Intergenic Intergenic 116411 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_107_833_-0.0284713842323558_9.68966788132849_0.330623455020744 chr5 63967518 63969522 + 0.330623455020744 NA intron (NM_145923, intron 1 of 6) CpG 377 NM_145923 100532 Mm.243632 NM_145923 ENSMUSG00000047881 Rell1 AA536743 RELT-like 1 protein-coding common_peak2_174_1458_0.0187871334839631_10.5201577346599_0.33061431724055 chr9 124066760 124069848 + 0.33061431724055 NA Intergenic Intergenic -33879 NM_009915 12772 Mm.6272 NM_009915 ENSMUSG00000049103 Ccr2 Cc-ckr-2|Ccr2a|Ccr2b|Ckr2|Ckr2a|Ckr2b|Cmkbr2|mJe-r chemokine (C-C motif) receptor 2 protein-coding common_peak1_47_293_0.0407154344420881_8.22003006205741_0.330592344059517 chr3 135485449 135486266 + 0.330592344059517 NA exon (NM_027288, exon 1 of 17) exon (NM_027288, exon 1 of 17) 246 NM_027288 110173 Mm.280536 NM_027288 ENSMUSG00000028164 Manba 2410030O07Rik|B930014J03Rik|Bmn mannosidase, beta A, lysosomal protein-coding common_peak2_64_450_-0.0400691029224838_8.79694907179414_0.330586223619122 chr7 80268941 80270272 + 0.330586223619122 NA promoter-TSS (NM_178070) promoter-TSS (NM_178070) -49 NM_178070 233405 Mm.322870 NM_178070 ENSMUSG00000030534 Vps33b - vacuolar protein sorting 33B protein-coding common_peak1_30_184_-0.0646992557820054_7.49903183262531_0.330506122213151 chr11 3290978 3291492 + 0.330506122213151 NA exon (NM_001253691, exon 1 of 5) exon (NM_001253691, exon 1 of 5) 778 NM_019574 56218 Mm.275563 NM_019574 ENSMUSG00000020453 Patz1 8430401L15Rik|AI447519|Mazr|Patz|Zfp278 POZ (BTB) and AT hook containing zinc finger 1 protein-coding common_peak2_31_177_0.0471321433451264_7.49929950263896_0.330506122213151 chr12 86795521 86796653 + 0.330506122213151 NA Intergenic Intergenic 61718 NM_001195767 627607 Mm.341880 NM_001195767 ENSMUSG00000059114 Lrrc74a EG627607|Gm6772|Lrrc74 leucine rich repeat containing 74A protein-coding common_peak1_31_177_0.0471321433451264_7.49929950263896_0.330506122213151 chr6 113658273 113658907 + 0.330506122213151 NA intron (NM_001113553, intron 2 of 11) intron (NM_001113553, intron 2 of 11) 20123 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding unique_peak2_30_184_-0.0646992557820054_7.49903183262531_0.330506122213151-2 chr11 120142170 120143563 + 0.330506122213151 NA intron (NM_001164799, intron 2 of 15) intron (NM_001164799, intron 2 of 15) 8485 NM_001164799 72055 Mm.253403 NM_024249 ENSMUSG00000061306 Slc38a10 1810073N04Rik solute carrier family 38, member 10 protein-coding unique_peak2_30_184_-0.0646992557820054_7.49903183262531_0.330506122213151 chr10 4631734 4633057 + 0.330506122213151 NA intron (NM_007956, intron 1 of 8) intron (NM_007956, intron 1 of 8) 20406 NM_007956 13982 Mm.9213 NM_007956 ENSMUSG00000019768 Esr1 ER|ER-alpha|ERa|ERalpha|ESR|Estr|Estra|Nr3a1 estrogen receptor 1 (alpha) protein-coding common_peak2_147_1185_0.0211199790381205_10.2224482840651_0.330492463131128 chr5 142462931 142465343 + 0.330492463131128 NA intron (NM_172725, intron 1 of 16) CpG 206 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding unique_peak2_24_130_0.0525921905989337_7.05971909683692_0.330420836657522 chr6 47930963 47932027 + 0.330420836657522 NA exon (NM_145576, exon 5 of 5) exon (NM_145576, exon 5 of 5) 10927 NM_001145881 232784 Mm.196782 NM_145576 ENSMUSG00000052763 Zfp212 Znf212|mKIAA3011 Zinc finger protein 212 protein-coding common_peak2_24_130_0.0525921905989337_7.05971909683692_0.330420836657522 chr2 167145274 167146109 + 0.330420836657522 NA intron (NM_008420, intron 1 of 1) intron (NM_008420, intron 1 of 1) 43127 NM_008420 16500 Mm.205341 NM_008420 ENSMUSG00000050556 Kcnb1 Kcr1-1|Kv2.1|Shab potassium voltage gated channel, Shab-related subfamily, member 1 protein-coding common_peak2_24_130_0.0525921905989337_7.05971909683692_0.330420836657522-2 chr3 36150996 36151647 + 0.330420836657522 NA intron (NM_001101478, intron 1 of 3) CpG 241 NM_001101478 241944 Mm.260056 NM_001101478 ENSMUSG00000033883 D3Ertd254e - DNA segment, Chr 3, ERATO Doi 254, expressed protein-coding common_peak1_24_130_0.0525921905989337_7.05971909683692_0.330420836657522 chr5 124048146 124048639 + 0.330420836657522 NA Intergenic Intergenic -16132 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak1_24_130_0.0525921905989337_7.05971909683692_0.330420836657522-2 chr7 105738717 105739097 + 0.330420836657522 NA intron (NM_001161724, intron 2 of 12) intron (NM_001161724, intron 2 of 12) -1522 NM_133951 101867 Mm.231400 NM_025897 ENSMUSG00000030888 Rrp8 1500003O22Rik|2900001K19Rik|AW538116 ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding common_peak1_46_304_-0.0495343450242309_8.22789825993813_0.330394917810602 chr9 110647895 110648736 + 0.330394917810602 NA intron (NM_183276, intron 1 of 53) intron (NM_183276, intron 1 of 53) 5846 NM_183276 235627 Mm.335481 NM_183276 ENSMUSG00000056724 Nbeal2 1110014F23Rik|BC042396|mKIAA0540 neurobeachin-like 2 protein-coding common_peak1_55_375_-0.0414117904733562_8.53388295644096_0.330375110595488 chr9 57536830 57537913 + 0.330375110595488 NA promoter-TSS (NM_175273) promoter-TSS (NM_175273) -157 NM_175273 78323 Mm.25814 NM_175273 ENSMUSG00000032305 Fam219b 2310046O06Rik|AI594866 family with sequence similarity 219, member B protein-coding common_peak1_108_842_-0.0276465854124464_9.70556552823586_0.330304283847111 chrX 41910842 41912472 + 0.330304283847111 NA intron (NM_001033422, intron 1 of 38) CpG 244 NM_001033422 331401 Mm.259498 NM_001033422 ENSMUSG00000037475 Thoc2 6330441O12Rik|D130005M13Rik|Gm1139|Gm1793|Tho2 THO complex 2 protein-coding common_peak1_38_242_-0.0518690539979207_7.89887797660682_0.330227638002125 chr7 58711472 58712207 + 0.330227638002125 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 53637 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_39_234_0.0412295922521331_7.89713174269107_0.330227638002125-2 chr9 20651883 20652727 + 0.330227638002125 NA intron (NM_023371, intron 1 of 3) CpG 175 NM_023371 23988 Mm.7906 NM_023371 ENSMUSG00000032171 Pin1 0610025L01Rik|D9Bwg1161e protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 protein-coding common_peak1_39_234_0.0412295922521331_7.89713174269107_0.330227638002125 chr5 32103617 32104651 + 0.330227638002125 NA Intergenic Intergenic -32338 NM_008037 14284 Mm.24684 NM_008037 ENSMUSG00000029135 Fosl2 Fra-2 fos-like antigen 2 protein-coding common_peak2_379_3794_0.0118102423450939_11.8957892914754_0.330211023001143 chr3 96261785 96264898 + 0.330211023001143 NA promoter-TSS (NM_033596) promoter-TSS (NM_033596) -24 NM_033596 97122 Mm.227295 NM_033596 ENSMUSG00000091405 Hist2h4 H4|X04652 histone cluster 2, H4 protein-coding common_peak1_160_1353_-0.0210151102160179_10.392504468467_0.330204095868266 chr5 65390552 65392118 + 0.330204095868266 NA promoter-TSS (NM_011292) promoter-TSS (NM_011292) 96 NM_011292 20005 Mm.300271 NM_011292 ENSMUSG00000047215 Rpl9 - ribosomal protein L9 protein-coding common_peak1_162_1336_0.0190606938280169_10.3943140970074_0.330160729707518 chr19 4220033 4222403 + 0.330160729707518 NA intron (NR_132308, intron 2 of 3) intron (NR_132308, intron 2 of 3) 6829 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak1_17_96_-0.0952274803144606_6.5522991020299_0.330063835521191 chr10 7471534 7472040 + 0.330063835521191 NA intron (NM_029975, intron 1 of 5) Lx3A|LINE|L1 1690 NM_029975 77777 Mm.442442 NM_029975 ENSMUSG00000079685 Ulbp1 A430108B07Rik|MULT1 UL16 binding protein 1 protein-coding common_peak1_17_96_-0.0952274803144606_6.5522991020299_0.330063835521191-3 chr4 46488639 46489031 + 0.330063835521191 NA promoter-TSS (NM_053179) promoter-TSS (NM_053179) -494 NM_053179 94181 Mm.249349 NM_053179 ENSMUSG00000028334 Nans 4632418E04Rik|BB056474|Sas N-acetylneuraminic acid synthase (sialic acid synthase) protein-coding common_peak1_17_96_-0.0952274803144606_6.5522991020299_0.330063835521191-2 chr4 32100817 32101291 + 0.330063835521191 NA Intergenic L1MB3|LINE|L1 136947 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_17_96_-0.0952274803144606_6.5522991020299_0.330063835521191 chrX 94367112 94367654 + 0.330063835521191 NA 5' UTR (NM_001199337, exon 1 of 9) 5' UTR (NM_001199337, exon 1 of 9) 229 NM_001199338 68316 Mm.379156 NM_026673 ENSMUSG00000079508 Apoo 0610008C08Rik|1110019O03Rik apolipoprotein O protein-coding common_peak2_401_4067_0.0111865636318615_11.9956972456734_0.329984812470642 chr11 67523598 67528626 + 0.329984812470642 NA Intergenic Intergenic -6886 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_161_1364_-0.0217308416279796_10.4038198149932_0.329967166828186 chr4 43971542 43974864 + 0.329967166828186 NA intron (NM_027450, intron 4 of 4) intron (NM_027450, intron 4 of 4) -10301 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding common_peak2_57_371_0.0361168145908941_8.55721721840348_0.329906809655669 chr6 52639673 52641165 + 0.329906809655669 NA promoter-TSS (NM_145567) promoter-TSS (NM_145567) -119 NM_145567 58875 Mm.286458 NM_145567 ENSMUSG00000029776 Hibadh 6430402H10Rik|AI265272 3-hydroxyisobutyrate dehydrogenase protein-coding common_peak1_77_537_0.0280933982375942_9.08550906167542_0.329823585937945 chr3 10439398 10440546 + 0.329823585937945 NA 5' UTR (NM_029068, exon 1 of 8) 5' UTR (NM_029068, exon 1 of 8) 158 NM_029068 74718 Mm.440548 NM_029068 ENSMUSG00000027534 Snx16 4930522N22Rik|AI117577|AI747675 sorting nexin 16 protein-coding common_peak2_77_537_0.0280933982375942_9.08550906167542_0.329823585937945 chr13 108337671 108339490 + 0.329823585937945 NA intron (NM_178683, intron 2 of 10) intron (NM_178683, intron 2 of 10) 22243 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak1_18_92_0.0612053922888594_6.56976150725246_0.329756527030102-5 chr5 137294521 137294923 + 0.329756527030102 NA promoter-TSS (NM_027356) promoter-TSS (NM_027356) 53 NM_027356 70240 Mm.124666 NM_027356 ENSMUSG00000051502 Ufsp1 2700038N03Rik|D5Ertd655e UFM1-specific peptidase 1 protein-coding common_peak1_18_92_0.0612053922888594_6.56976150725246_0.329756527030102-3 chr16 32189904 32190359 + 0.329756527030102 NA Intergenic Intergenic 10331 NM_001033539 328660 Mm.441006 NM_001033539 ENSMUSG00000075269 Bex6 B020003O03Rik brain expressed family member 6 protein-coding common_peak1_18_92_0.0612053922888594_6.56976150725246_0.329756527030102-4 chr2 48469245 48469610 + 0.329756527030102 NA Intergenic Intergenic -344682 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding unique_peak2_18_92_0.0612053922888594_6.56976150725246_0.329756527030102 chr2 93444638 93445306 + 0.329756527030102 NA intron (NM_001136055, intron 1 of 9) intron (NM_001136055, intron 1 of 9) 7700 NM_001271462 12521 Mm.4261 NM_007656 ENSMUSG00000027215 Cd82 AA682076|AL023070|C33|IA4|Kai1|Tspan27 CD82 antigen protein-coding common_peak1_18_92_0.0612053922888594_6.56976150725246_0.329756527030102-2 chr14 121198957 121199412 + 0.329756527030102 NA intron (NM_134082, intron 2 of 26) intron (NM_134082, intron 2 of 26) 163610 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding unique_peak2_18_92_0.0612053922888594_6.56976150725246_0.329756527030102-2 chr6 142538005 142538764 + 0.329756527030102 NA Intergenic Intergenic -30427 NM_001302765 16832 Mm.9745 NM_008492 ENSMUSG00000030246 Ldhb AI790582|H-Ldh|LDH-B|LDH-H|Ldh-2|Ldh2 lactate dehydrogenase B protein-coding common_peak1_18_92_0.0612053922888594_6.56976150725246_0.329756527030102-6 chr6 91112893 91113259 + 0.329756527030102 NA intron (NM_018815, intron 1 of 39) B3|SINE|B2 3750 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak1_18_92_0.0612053922888594_6.56976150725246_0.329756527030102 chr11 117963682 117964093 + 0.329756527030102 NA Intergenic Intergenic 5479 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak2_224_1989_0.0157315090119408_10.966418469937_0.329740698773162 chr8 70509261 70511698 + 0.329740698773162 NA promoter-TSS (NM_019883) promoter-TSS (NM_019883) -112 NM_019883 22186 Mm.297372 NM_019883 ENSMUSG00000090137 Uba52 D8Ertd21e|Gm1863|Rps27a|Ubb|Ubc ubiquitin A-52 residue ribosomal protein fusion product 1 protein-coding common_peak1_47_311_-0.045014439583797_8.26289499907035_0.329724218302089 chr1 181150795 181151471 + 0.329724218302089 NA intron (NM_030131, intron 1 of 4) CpG 202 NM_030131 98417 Mm.38229 NM_030131 ENSMUSG00000062169 Cnih4 AI647760|AW050376|CNIH-4|D530030D03Rik|E430023H19Rik|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding common_peak2_47_311_-0.045014439583797_8.26289499907035_0.329724218302089 chr7 25132118 25133307 + 0.329724218302089 NA promoter-TSS (NM_001163554) promoter-TSS (NM_001163554) -252 NM_001163554 18987 Mm.76683 NM_011138 ENSMUSG00000008496 Pou2f2 Oct-2|Oct2a|Oct2b|Oct2c|Oct2d|Otf-2|Otf2 POU domain, class 2, transcription factor 2 protein-coding common_peak1_47_311_-0.045014439583797_8.26289499907035_0.329724218302089-2 chr6 128629294 128630470 + 0.329724218302089 NA Intergenic Intergenic -6948 NM_010737 17057 Mm.16729 NM_010737 ENSMUSG00000030361 Klrb1a Ly55a|NKR-P1.7|NKR-P1A|NKRP12|Nkrp1-a|Nkrp1a|ly-55A killer cell lectin-like receptor subfamily B member 1A protein-coding common_peak1_257_2355_0.0143501737631286_11.209298910712_0.329692647437497 chr11 85233929 85235851 + 0.329692647437497 NA promoter-TSS (NR_028329) promoter-TSS (NR_028329) 230 NM_025825 66884 Mm.271997 NM_025825 ENSMUSG00000018481 Appbp2 1300003O07Rik|AI465480|PAT1 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 protein-coding common_peak1_76_552_-0.0344141294616414_9.09392860550389_0.329665373011517 chr9 120067761 120069227 + 0.329665373011517 NA promoter-TSS (NM_009987) promoter-TSS (NM_009987) -198 NM_009987 13051 Mm.44065 NM_009987 ENSMUSG00000052336 Cx3cr1 - chemokine (C-X3-C motif) receptor 1 protein-coding common_peak1_177_1529_-0.0196852576294706_10.5694733087653_0.329621017322147 chr2 132252392 132254117 + 0.329621017322147 NA promoter-TSS (NM_011045) promoter-TSS (NM_011045) -74 NM_011045 18538 Mm.7141 NM_011045 ENSMUSG00000027342 Pcna - proliferating cell nuclear antigen protein-coding common_peak1_179_1510_0.0181153147725155_10.5703456025511_0.329602207167889 chr2 24933838 24935275 + 0.329602207167889 NA intron (NM_001162485, intron 1 of 7) intron (NM_001162485, intron 1 of 7) 725 NR_027876 215705 Mm.45275 NM_178408 ENSMUSG00000026972 Arrdc1 AI957342|BC004091 arrestin domain containing 1 protein-coding common_peak1_112_849_0.0242004671473364_9.74341926459873_0.329552327024269 chr6 72552182 72553555 + 0.329552327024269 NA intron (NM_001271395, intron 1 of 9) intron (NM_001271395, intron 1 of 9) 3221 NM_001271395 12332 Mm.18626 NM_007599 ENSMUSG00000056737 Capg gCap39|mbh1 capping protein (actin filament), gelsolin-like protein-coding common_peak2_165_1366_0.0193206527486431_10.4264578539804_0.329525370874912 chr18 35598329 35599778 + 0.329525370874912 NA intron (NM_026420, intron 1 of 3) CpG 386 NM_026420 67869 Mm.126534 NM_026420 ENSMUSG00000037058 Paip2 2310050K10Rik|AU045972 polyadenylate-binding protein-interacting protein 2 protein-coding unique_peak2_32_184_0.0459384871445678_7.5543507040886_0.329405549833074 chr17 6861310 6862508 + 0.329405549833074 NA Intergenic Intergenic 33428 NR_030465 751529 NR_030465 ENSMUSG00000076218 Mir692-1 Mirn692-1|mir-692-1 microRNA 692-1 ncRNA common_peak2_40_241_0.042580027790831_7.94015325117001_0.329393344424796 chr7 105751596 105752352 + 0.329393344424796 NA intron (NM_009906, intron 2 of 12) intron (NM_009906, intron 2 of 12) 233 NM_009906 12751 Mm.20837 NM_009906 ENSMUSG00000030894 Tpp1 Cln2|LPIC|TPP-1|TPP-I tripeptidyl peptidase I protein-coding common_peak1_89_641_0.0263614616286851_9.33961021793665_0.329368605787286 chr18 42511366 42512460 + 0.329368605787286 NA intron (NM_001289526, intron 1 of 21) CpG 426 NR_110344 56070 Mm.270511 NM_001039474 ENSMUSG00000024498 Tcerg1 2410022J09Rik|2900090C16Rik|AI428505|CA150b|FBP23|FBP28|Taf2s|ca150|p144 transcription elongation regulator 1 (CA150) protein-coding common_peak1_150_1251_-0.0214984619470666_10.2792696159591_0.329353796714079 chr9 63398315 63400021 + 0.329353796714079 NA promoter-TSS (NM_027090) promoter-TSS (NM_027090) 76 NM_027090 69478 Mm.113942 NM_027090 ENSMUSG00000032403 2300009A05Rik - RIKEN cDNA 2300009A05 gene protein-coding unique_peak2_39_250_-0.0537970151336395_7.94464504638395_0.329278036075222 chr11 119133006 119134625 + 0.329278036075222 NA Intergenic Intergenic 20322 NR_105899 102465563 NR_105899 ENSMUSG00000098704 Mir6934 Gm27523|mmu-mir-6934 microRNA 6934 ncRNA common_peak1_39_250_-0.0537970151336395_7.94464504638395_0.329278036075222 chr8 94408157 94408893 + 0.329278036075222 NA Intergenic MIR3|SINE|MIR 22025 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak2_58_380_0.0318792175485036_8.58958679626757_0.329231728841259 chr1 86188720 86190637 + 0.329231728841259 NA intron (NM_001310702, intron 11 of 24) intron (NM_001310702, intron 11 of 24) 34898 NM_001310702 78795 Mm.379264 NM_027456 ENSMUSG00000062590 Armc9 3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik armadillo repeat containing 9 protein-coding common_peak1_113_859_0.0229181811470713_9.759651940163_0.329223151630317-2 chr2 31115018 31116952 + 0.329223151630317 NA intron (NM_001177648, intron 1 of 16) intron (NM_001177648, intron 1 of 16) -19485 NM_001177650 14269 Mm.52297 NM_019406 ENSMUSG00000075415 Fnbp1 1110057E06Rik|2210010H06Rik|FBP1|Fbp17 formin binding protein 1 protein-coding common_peak1_113_859_0.0229181811470713_9.759651940163_0.329223151630317 chr17 84224571 84226313 + 0.329223151630317 NA intron (NM_183021, intron 35 of 37) intron (NM_183021, intron 35 of 37) -37495 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_194_1709_-0.0187315732870807_10.7304148231297_0.329220323368171 chr1 185362133 185364282 + 0.329220323368171 NA exon (NM_029735, exon 1 of 32) exon (NM_029735, exon 1 of 32) 112 NM_029735 107508 Mm.154511 NM_029735 ENSMUSG00000026615 Eprs 2410081F06Rik|3010002K18Rik|C79379|Qprs glutamyl-prolyl-tRNA synthetase protein-coding common_peak2_181_1531_0.0177567719814462_10.5900789679157_0.329212833435096 chr5 144254116 144257316 + 0.329212833435096 NA intron (NM_018772, intron 1 of 2) CpG 491 NM_018772 55950 Mm.38011 NM_018772 ENSMUSG00000047843 Bri3 I3 brain protein I3 protein-coding common_peak1_24_142_-0.0738561446420052_7.12294326445739_0.32915196576917 chr14 20177359 20177927 + 0.32915196576917 NA intron (NM_021542, intron 1 of 4) intron (NM_021542, intron 1 of 4) 4139 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding unique_peak2_24_142_-0.0738561446420052_7.12294326445739_0.32915196576917 chr11 100823578 100824784 + 0.32915196576917 NA intron (NM_001113563, intron 1 of 18) intron (NM_001113563, intron 1 of 18) -1611 NM_011489 20851 Mm.34064 NM_011489 ENSMUSG00000020919 Stat5b - signal transducer and activator of transcription 5B protein-coding common_peak2_153_1246_0.0190881021297518_10.2937898008945_0.329060397704771 chr6 83325190 83327088 + 0.329060397704771 NA promoter-TSS (NM_145571) promoter-TSS (NM_145571) 100 NM_145571 232157 Mm.29500 NM_145571 ENSMUSG00000043131 Mob1a 4022402H07Rik|MOB1|MOB4B|Mobk1b|Mobkl1b MOB kinase activator 1A protein-coding common_peak2_48_319_-0.0450518579766772_8.29940216589902_0.32899426709928 chr11 96074987 96075893 + 0.32899426709928 NA intron (NM_007506, intron 1 of 4) intron (NM_007506, intron 1 of 4) 191 NM_001161419 11951 Mm.258 NM_007506 ENSMUSG00000006057 Atp5g1 - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) protein-coding common_peak1_90_650_0.0258313095544125_9.35942938794284_0.328980097205623 chr2 121505933 121507331 + 0.328980097205623 NA promoter-TSS (NM_026220) promoter-TSS (NM_026220) 24 NM_026220 67532 Mm.440764 NM_026220 ENSMUSG00000068479 Mfap1a 4432409M24Rik|Mfap1 microfibrillar-associated protein 1A protein-coding common_peak1_25_137_0.0468967878627629_7.13197285070955_0.328951063688879-2 chr4 151006346 151007036 + 0.328951063688879 NA intron (NM_011067, intron 20 of 20) L1M4c|LINE|L1 9594 NM_011910 24111 Mm.89984 NM_011910 ENSMUSG00000028963 Uts2 UII|Ucn2|prepro-UII urotensin 2 protein-coding common_peak1_25_137_0.0468967878627629_7.13197285070955_0.328951063688879 chr1 80754604 80755042 + 0.328951063688879 NA intron (NM_175291, intron 1 of 55) intron (NM_175291, intron 1 of 55) 3730 NM_175291 210293 Mm.133473 NM_175291 ENSMUSG00000038608 Dock10 9330153B10Rik|A630054M16Rik|Jr4|Jr5|R75174|ZIZ3|Zizimin3|mKIAA0694 dedicator of cytokinesis 10 protein-coding unique_peak2_25_137_0.0468967878627629_7.13197285070955_0.328951063688879 chr3 122729241 122730488 + 0.328951063688879 NA intron (NM_153422, intron 1 of 20) CpG 706 NM_153422 242202 Mm.134911 NM_153422 ENSMUSG00000053965 Pde5a Cgbpde|Cn5n|PDE5a2|Pde5|Pde5a1 phosphodiesterase 5A, cGMP-specific protein-coding common_peak1_25_137_0.0468967878627629_7.13197285070955_0.328951063688879-3 chr6 130191880 130192289 + 0.328951063688879 NA intron (NM_010651, intron 1 of 7) Lx9|LINE|L1 1028 NM_010651 16640 Mm.457996 NM_010651 ENSMUSG00000033024 Klra9 LY49I1|Ly49I killer cell lectin-like receptor subfamily A, member 9 protein-coding common_peak1_79_554_0.0280148887660197_9.13035140562048_0.328949460831558 chr11 48825701 48826808 + 0.328949460831558 NA 5' UTR (NM_053166, exon 1 of 7) 5' UTR (NM_053166, exon 1 of 7) 116 NM_053166 94089 Mm.390335 NM_053166 ENSMUSG00000040350 Trim7 AI790312 tripartite motif-containing 7 protein-coding common_peak1_125_1004_-0.0247583149281532_9.96060062860222_0.328936768468903 chr1 180255493 180256889 + 0.328936768468903 NA intron (NM_001128605, intron 1 of 10) CpG 109 NM_001128605 19165 Mm.330850 NM_011183 ENSMUSG00000010609 Psen2 ALG-3|Ad4h|Alg3|PS-2|PS2|Psnl2|STM2 presenilin 2 protein-coding common_peak2_89_667_-0.0309133437230642_9.36824762061252_0.328810825401235 chr11 103380652 103383056 + 0.328810825401235 NA intron (NM_183034, intron 5 of 11) intron (NM_183034, intron 5 of 11) -18162 NM_001205236 544817 Mm.259113 NM_133715 ENSMUSG00000034255 Arhgap27 2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20 Rho GTPase activating protein 27 protein-coding common_peak1_89_667_-0.0309133437230642_9.36824762061252_0.328810825401235 chr11 16976914 16977893 + 0.328810825401235 NA intron (NM_019549, intron 9 of 9) intron (NM_019549, intron 9 of 9) 25993 NM_176982 319701 Mm.120672 NM_176982 ENSMUSG00000044966 Fbxo48 A630050E13Rik F-box protein 48 protein-coding common_peak2_89_667_-0.0309133437230642_9.36824762061252_0.328810825401235-2 chrX 108832667 108834364 + 0.328810825401235 NA promoter-TSS (NR_015493) promoter-TSS (NR_015493) 840 NM_001081477 382236 Mm.100112 NM_001081477 ENSMUSG00000063663 Brwd3 Brodl|D030064D06Rik|Gm596 bromodomain and WD repeat domain containing 3 protein-coding common_peak2_297_2867_-0.0142919954079268_11.4786833109979_0.328768024261458 chr9 110530592 110534149 + 0.328768024261458 NA promoter-TSS (NM_001081340) promoter-TSS (NM_001081340) -227 NM_001081340 235626 Mm.288949 NM_001081340 ENSMUSG00000044791 Setd2 4921524K10Rik|BC031601|KMT3A SET domain containing 2 protein-coding common_peak1_113_889_-0.0265504951172293_9.78438627829514_0.328743392546628 chr17 25861042 25862560 + 0.328743392546628 NA promoter-TSS (NM_001163766) promoter-TSS (NM_001163766) -286 NM_001163766 106618 Mm.35470 NM_134124 ENSMUSG00000073434 Wdr90 3230401M21Rik|AI551153|mKIAA1924 WD repeat domain 90 protein-coding common_peak2_167_1425_-0.020446689086322_10.4675349219007_0.328720120172185 chr15 88732039 88735156 + 0.328720120172185 NA intron (NM_001033274, intron 1 of 12) C-rich|Low_complexity|Low_complexity 622 NM_001033274 223770 Mm.254438 NM_001033274 ENSMUSG00000022387 Brd1 1110059H06Rik|AI316859|mKIAA4191 bromodomain containing 1 protein-coding common_peak2_69_469_0.0315410791448905_8.89228748613744_0.328717460937332 chr3 8666609 8668158 + 0.328717460937332 NA promoter-TSS (NM_010423) promoter-TSS (NM_010423) -345 NM_010423 15213 Mm.29581 NM_010423 ENSMUSG00000040289 Hey1 AI316788|AI414254|CHF2|HRT1|Herp2|Hesr1|bHLHb31|hesr-1 hairy/enhancer-of-split related with YRPW motif 1 protein-coding common_peak1_59_388_0.0316423987978673_8.61944754438513_0.328657616458693 chr11 68901642 68902473 + 0.328657616458693 NA intron (NR_003373, intron 1 of 3) intron (NR_003373, intron 1 of 3) 468 NR_003373 100034726 Mm.3229 NR_003373 ENSMUSG00000062353 Gm15772 ENSMUSG00000062353|OTTMUSG00000026108 ribosomal protein L26 pseudogene pseudo common_peak1_12_65_-0.115585185903877_5.98660152640652_0.328608881955056-2 chr4 19709235 19709594 + 0.328608881955056 NA promoter-TSS (NM_177327) promoter-TSS (NM_177327) -410 NR_074090 107568 Mm.78312 NM_177327 ENSMUSG00000041058 Wwp1 8030445B08Rik|AIP5|SDRP1|Tiul1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding unique_peak2_12_65_-0.115585185903877_5.98660152640652_0.328608881955056 chr17 8195699 8196328 + 0.328608881955056 NA 3' UTR (NM_201230, exon 12 of 12) 3' UTR (NM_201230, exon 12 of 12) 30495 NM_201230 75296 Mm.227250 NM_201230 ENSMUSG00000069135 Fgfr1op 4930553O10Rik|FOP Fgfr1 oncogene partner protein-coding common_peak1_12_65_-0.115585185903877_5.98660152640652_0.328608881955056 chr2 152806256 152806592 + 0.328608881955056 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 24293 NM_001289716 12048 Mm.238213 NM_009743 ENSMUSG00000007659 Bcl2l1 Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1 BCL2-like 1 protein-coding common_peak1_91_659_0.025363212220407_9.37900382035602_0.328602097253124 chr15 5116615 5117614 + 0.328602097253124 NA intron (NM_026069, intron 1 of 3) intron (NM_026069, intron 1 of 3) 501 NM_026069 67281 Mm.10474 NM_026069 ENSMUSG00000041841 Rpl37 3110005M08Rik ribosomal protein L37 protein-coding common_peak2_91_659_0.025363212220407_9.37900382035602_0.328602097253124 chr3 145937744 145938831 + 0.328602097253124 NA exon (NM_025555, exon 1 of 3) exon (NM_025555, exon 1 of 3) 255 NM_025555 66421 Mm.25137 NM_025555 ENSMUSG00000036873 2410004B18Rik 4930572C24Rik RIKEN cDNA 2410004B18 gene protein-coding common_peak2_232_2077_0.0151316219696369_11.028545749889_0.328530946334501 chr18 32161508 32164077 + 0.328530946334501 NA promoter-TSS (NM_011946) promoter-TSS (NM_011946) -297 NM_011946 26405 Mm.211762 NM_011946 ENSMUSG00000024383 Map3k2 9630061B06Rik|AI585793|Mekk2|Mekk2b mitogen-activated protein kinase kinase kinase 2 protein-coding common_peak2_58_400_-0.0419320214130945_8.62649241574837_0.328517722280057 chr13 21402039 21403197 + 0.328517722280057 NA intron (NM_001145778, intron 1 of 5) CpG 137 NM_001145778 72739 Mm.296071 NM_023685 ENSMUSG00000021327 Zkscan3 2810435N07Rik|AA408594|AI132359|Skz1|Zf47|Zfp-47|Zfp306|Zfp307|mszf35 zinc finger with KRAB and SCAN domains 3 protein-coding common_peak2_40_257_-0.0497839903578283_7.98633526024434_0.328496403681176 chr2 120499542 120500810 + 0.328496403681176 NA intron (NM_007601, intron 15 of 23) intron (NM_007601, intron 15 of 23) 23267 NM_001109761 12335 Mm.458021 NM_007601 ENSMUSG00000079110 Capn3 AI323605|Capa-3|Capa3|Lp82|p94 calpain 3 protein-coding common_peak2_41_249_0.0383026703227678_7.98493561982347_0.328496403681176 chr8 105851227 105852252 + 0.328496403681176 NA intron (NM_177150, intron 1 of 12) intron (NM_177150, intron 1 of 12) 269 NM_177150 320394 Mm.334775 NM_177150 ENSMUSG00000036672 Cenpt G630055P03Rik centromere protein T protein-coding common_peak1_40_257_-0.0497839903578283_7.98633526024434_0.328496403681176 chr6 88445989 88446587 + 0.328496403681176 NA exon (NM_023060, exon 1 of 7) exon (NM_023060, exon 1 of 7) 251 NM_023060 65967 Mm.333237 NM_023060 ENSMUSG00000033216 Eefsec Selb|sec eukaryotic elongation factor, selenocysteine-tRNA-specific protein-coding common_peak1_41_249_0.0383026703227678_7.98493561982347_0.328496403681176 chr17 28925548 28926308 + 0.328496403681176 NA Intergenic Intergenic -10604 NM_172450 207819 Mm.248931 NM_172450 ENSMUSG00000048905 4930539E08Rik 9130014G02 RIKEN cDNA 4930539E08 gene protein-coding common_peak1_233_2088_0.0150934998803933_11.0361435270073_0.328386857984277 chr7 112022800 112024452 + 0.328386857984277 NA 5' UTR (NM_177249, exon 1 of 29) 5' UTR (NM_177249, exon 1 of 29) 120 NM_177249 74996 Mm.16974 NM_133758 ENSMUSG00000059263 Usp47 4930502N04Rik|A630020C16Rik ubiquitin specific peptidase 47 protein-coding common_peak1_50_317_0.0347878218431017_8.33027686620591_0.328385362504353 chr16 49698705 49699838 + 0.328385362504353 NA promoter-TSS (NM_028680) promoter-TSS (NM_028680) -23 NM_028680 73916 Mm.241276 NM_028680 ENSMUSG00000032965 Ift57 4833420A15Rik|Esrrbl1|Hippi|MHS4R2 intraflagellar transport 57 protein-coding common_peak1_33_191_0.045186071439371_7.60755553644084_0.328384209351583 chr2 25535616 25536247 + 0.328384209351583 NA intron (NM_009422, intron 4 of 10) PB1D10|SINE|Alu 11009 NM_001290413 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding unique_peak2_33_191_0.045186071439371_7.60755553644084_0.328384209351583 chr1 180406568 180407988 + 0.328384209351583 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) 76226 NM_001081227 381310 Mm.44791 NM_001081227 ENSMUSG00000053963 Stum 6330403A02Rik|ENSMUSG00000056615|Gm10001|R75555 mechanosensory transduction mediator protein-coding unique_peak2_33_191_0.045186071439371_7.60755553644084_0.328384209351583-2 chr11 115150489 115151909 + 0.328384209351583 NA intron (NM_001163753, intron 2 of 8) intron (NM_001163753, intron 2 of 8) -2979 NM_021411 58222 Mm.143789 NM_021411 ENSMUSG00000020732 Rab37 B230331O03Rik|B230354I04Rik RAB37, member RAS oncogene family protein-coding common_peak1_215_1936_-0.0175637382045899_10.910826369501_0.328328654519702 chr3 84814531 84815974 + 0.328328654519702 NA promoter-TSS (NM_001177773) promoter-TSS (NM_001177773) -325 NM_001177773 50754 Mm.196475 NM_080428 ENSMUSG00000028086 Fbxw7 1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10 F-box and WD-40 domain protein 7 protein-coding common_peak1_18_102_-0.0861363237863282_6.64343236529005_0.328312670805966-3 chr5 100499167 100499620 + 0.328312670805966 NA promoter-TSS (NM_001115010) promoter-TSS (NM_001115010) -820 NM_001115010 231506 Mm.212568 NM_172714 ENSMUSG00000035310 Lin54 AI461788 lin-54 homolog (C. elegans) protein-coding common_peak2_18_102_-0.0861363237863282_6.64343236529005_0.328312670805966 chr5 129778885 129779577 + 0.328312670805966 NA 5' UTR (NM_133900, exon 3 of 8) 5' UTR (NM_133900, exon 3 of 8) 8022 NM_133900 100678 Mm.271784 NM_133900 ENSMUSG00000029446 Psph AI480570|PSP|PSPase phosphoserine phosphatase protein-coding common_peak1_18_102_-0.0861363237863282_6.64343236529005_0.328312670805966-2 chr3 96104002 96104425 + 0.328312670805966 NA promoter-TSS (NM_001025613) promoter-TSS (NM_001025613) -314 NM_001025613 229603 Mm.272336 NM_001025613 ENSMUSG00000038495 Otud7b 2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1 OTU domain containing 7B protein-coding common_peak1_18_102_-0.0861363237863282_6.64343236529005_0.328312670805966 chr16 92804323 92804774 + 0.328312670805966 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) 21526 NM_001111021 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_18_102_-0.0861363237863282_6.64343236529005_0.328312670805966-6 chrX 20950110 20950602 + 0.328312670805966 NA intron (NM_007922, intron 1 of 5) intron (NM_007922, intron 1 of 5) 252 NM_007922 13712 Mm.405823 NM_007922 ENSMUSG00000009406 Elk1 Elk-1 ELK1, member of ETS oncogene family protein-coding common_peak1_18_102_-0.0861363237863282_6.64343236529005_0.328312670805966-4 chr6 91107894 91108303 + 0.328312670805966 NA intron (NM_018815, intron 1 of 39) intron (NM_018815, intron 1 of 39) 8728 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak1_18_102_-0.0861363237863282_6.64343236529005_0.328312670805966-5 chrX 20658503 20658918 + 0.328312670805966 NA 5' UTR (NM_001276317, exon 1 of 26) 5' UTR (NM_001276317, exon 1 of 26) 206 NM_001276317 22201 Mm.1104 NM_009457 ENSMUSG00000001924 Uba1 A1S9|Sbx|Ube-1|Ube1x ubiquitin-like modifier activating enzyme 1 protein-coding common_peak1_70_478_0.0292777001108373_8.9185206957916_0.328202056514393 chr10 41977805 41978992 + 0.328202056514393 NA intron (NM_001034858, intron 6 of 17) intron (NM_001034858, intron 6 of 17) 39984 NM_001034858 213402 Mm.211320 NM_001034858 ENSMUSG00000071324 Armc2 2610018I05Rik armadillo repeat containing 2 protein-coding common_peak2_218_1924_0.0158108120692884_10.9185481365043_0.328187574657288 chr12 79171609 79173305 + 0.328187574657288 NA promoter-TSS (NM_016800) promoter-TSS (NM_016800) 1 NM_016800 53612 Mm.265929 NM_016800 ENSMUSG00000021124 Vti1b AU015348|GES30|MVti1b|SNARE|Vti1-rp1 vesicle transport through interaction with t-SNAREs 1B protein-coding common_peak1_143_1147_0.0196153687560479_10.1747146110537_0.328185391001018 chr2 65237766 65239531 + 0.328185391001018 NA promoter-TSS (NM_027225) promoter-TSS (NM_027225) -22 NM_027225 319876 Mm.34159 NM_027225 ENSMUSG00000034903 Cobll1 1810047P18Rik|Coblr1|D430044D16Rik Cobl-like 1 protein-coding common_peak2_250_2325_-0.0158379006592195_11.1757164311436_0.328067905713386 chr3 129531471 129534804 + 0.328067905713386 NA intron (NM_130450, intron 2 of 4) intron (NM_130450, intron 2 of 4) 751 NM_130450 170439 Mm.314113 NM_130450 ENSMUSG00000041220 Elovl6 C77826|FAE|LCE ELOVL family member 6, elongation of long chain fatty acids (yeast) protein-coding common_peak1_19_98_0.0617776075511669_6.66024542385519_0.328041145103237-4 chr12 100626633 100626991 + 0.328041145103237 NA intron (NM_153587, intron 3 of 17) L1M4b|LINE|L1 98216 NM_153587 73086 Mm.220417 NM_153587 ENSMUSG00000021180 Rps6ka5 3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK|RLSK|S6K-alpha-5 ribosomal protein S6 kinase, polypeptide 5 protein-coding common_peak2_19_98_0.0617776075511669_6.66024542385519_0.328041145103237-2 chr4 15993796 15994570 + 0.328041145103237 NA Intergenic Intergenic 19694 NM_145950 209212 Mm.46455 NM_145950 ENSMUSG00000041153 Osgin2 BC010311|C230027H09Rik oxidative stress induced growth inhibitor family member 2 protein-coding common_peak1_19_98_0.0617776075511669_6.66024542385519_0.328041145103237 chr1 39987488 39987926 + 0.328041145103237 NA intron (NM_001252200, intron 10 of 31) (T)n|Simple_repeat|Simple_repeat 86794 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding common_peak1_19_98_0.0617776075511669_6.66024542385519_0.328041145103237-6 chrX 50583930 50584338 + 0.328041145103237 NA intron (NR_015505, intron 13 of 19) intron (NR_015505, intron 13 of 19) 46745 NR_131207 102639259 Mm.350898 NR_131207 Gm35612 - predicted gene, 35612 ncRNA common_peak1_19_98_0.0617776075511669_6.66024542385519_0.328041145103237-5 chr2 165857804 165858280 + 0.328041145103237 NA intron (NM_001291158, intron 2 of 23) intron (NM_001291158, intron 2 of 23) 131 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak1_19_98_0.0617776075511669_6.66024542385519_0.328041145103237-3 chr11 6000870 6001352 + 0.328041145103237 NA intron (NM_001174053, intron 4 of 19) intron (NM_001174053, intron 4 of 19) 45353 NM_019661 56418 Mm.294821 NM_019661 ENSMUSG00000002741 Ykt6 0610042I15Rik|1810013M05Rik|AW105923 YKT6 v-SNARE homolog (S. cerevisiae) protein-coding unique_peak2_19_98_0.0617776075511669_6.66024542385519_0.328041145103237-2 chr5 73199272 73200235 + 0.328041145103237 NA intron (NM_028194, intron 2 of 62) intron (NM_028194, intron 2 of 62) 56865 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding unique_peak2_19_98_0.0617776075511669_6.66024542385519_0.328041145103237 chr1 75179572 75180405 + 0.328041145103237 NA TTS (NR_109938) TTS (NR_109938) 404 NM_023732 74104 Mm.28663 NM_023732 ENSMUSG00000026198 Abcb6 1200005B17Rik ATP-binding cassette, sub-family B (MDR/TAP), member 6 protein-coding common_peak1_19_98_0.0617776075511669_6.66024542385519_0.328041145103237-2 chr1 72307175 72307589 + 0.328041145103237 NA promoter-TSS (NM_009533) promoter-TSS (NM_009533) -39 NM_009533 22596 Mm.246952 NM_009533 ENSMUSG00000026187 Xrcc5 AI314015|Ku80|Ku86 X-ray repair complementing defective repair in Chinese hamster cells 5 protein-coding common_peak2_19_98_0.0617776075511669_6.66024542385519_0.328041145103237 chr13 3893130 3893844 + 0.328041145103237 NA promoter-TSS (NM_001047159) promoter-TSS (NM_001047159) 94 NM_001047159 56349 Mm.22261 NM_019671 ENSMUSG00000021215 Net1 Net1a|mNET1 neuroepithelial cell transforming gene 1 protein-coding unique_peak2_19_98_0.0617776075511669_6.66024542385519_0.328041145103237-3 chr7 132717205 132718081 + 0.328041145103237 NA intron (NM_175268, intron 4 of 4) intron (NM_175268, intron 4 of 4) 69292 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_117_897_0.021567081487035_9.82135517548466_0.32803866846873 chr15 79927796 79928798 + 0.32803866846873 NA intron (NM_144811, intron 2 of 6) intron (NM_144811, intron 2 of 6) 4349 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak2_103_795_-0.0279787535300056_9.62263524377865_0.328035972189829 chr1 173490082 173492270 + 0.328035972189829 NA Intergenic Intergenic 44781 NM_001024721 545384 Mm.371698 NM_001024721 ENSMUSG00000070501 Ifi214 Pyhin-B|p214 interferon activated gene 214 protein-coding common_peak1_203_1763_0.0162605539426472_10.7927651225288_0.328028161076571 chr7 44245661 44247151 + 0.328028161076571 NA promoter-TSS (NM_025880) promoter-TSS (NM_025880) -316 NM_025880 668661 Mm.274492 NM_025880 ENSMUSG00000045411 2410002F23Rik - RIKEN cDNA 2410002F23 gene protein-coding common_peak2_384_3857_0.0111896996022836_11.9192322778502_0.327973708481736 chr6 30298753 30304957 + 0.327973708481736 NA intron (NM_009459, intron 1 of 6) intron (NM_009459, intron 1 of 6) 2684 NM_009459 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak2_220_1946_0.01550400732871_10.9347891723847_0.327882274162861 chrX 77794590 77797962 + 0.327882274162861 NA promoter-TSS (NM_016979) promoter-TSS (NM_016979) -316 NM_016979 19108 Mm.290338 NM_016979 ENSMUSG00000035725 Prkx PKX1|Pkare protein kinase, X-linked protein-coding common_peak1_26_143_0.0522825653972827_7.19606628414095_0.327803457540959-2 chr14 20924170 20924776 + 0.327803457540959 NA Intergenic Intergenic -4960 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding common_peak1_26_143_0.0522825653972827_7.19606628414095_0.327803457540959 chr1 21318198 21318671 + 0.327803457540959 NA Intergenic Intergenic -20122 NR_002858 241041 Mm.290634 NR_002858 ENSMUSG00000025936 Gm4956 EG241041 predicted gene 4956 pseudo common_peak1_25_149_-0.0733974458549485_7.19211996756841_0.327803457540959-3 chr5 110653572 110654150 + 0.327803457540959 NA promoter-TSS (NM_153570) promoter-TSS (NM_153570) 410 NM_027156 69663 Mm.5267 NM_027156 ENSMUSG00000029504 Ddx51 2310061O04Rik|AA537002|C81583|R75505 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 protein-coding common_peak1_25_149_-0.0733974458549485_7.19211996756841_0.327803457540959-2 chr11 49984209 49984694 + 0.327803457540959 NA Intergenic B3|SINE|B2 -40880 NM_021540 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding unique_peak2_25_149_-0.0733974458549485_7.19211996756841_0.327803457540959 chr16 64766586 64767679 + 0.327803457540959 NA intron (NM_026273, intron 2 of 2) intron (NM_026273, intron 2 of 2) 3807 NM_026273 67609 Mm.212157 NM_026273 ENSMUSG00000059920 4930453N24Rik AI649104|din RIKEN cDNA 4930453N24 gene protein-coding common_peak1_25_149_-0.0733974458549485_7.19211996756841_0.327803457540959 chr10 30600298 30600836 + 0.327803457540959 NA intron (NM_028604, intron 1 of 12) CpG 182 NM_028604 73681 Mm.294503 NM_028604 ENSMUSG00000019792 Trmt11 2410075D05Rik|3110045I18Rik|AW213713 tRNA methyltransferase 11 protein-coding common_peak2_26_143_0.0522825653972827_7.19606628414095_0.327803457540959 chr2 3755465 3756581 + 0.327803457540959 NA intron (NM_025626, intron 1 of 3) intron (NM_025626, intron 1 of 3) 42565 NM_025626 66540 Mm.277864 NM_025626 ENSMUSG00000026655 Fam107b 3110001A13Rik|AA589595|AA959793|AI132312 family with sequence similarity 107, member B protein-coding unique_peak2_26_143_0.0522825653972827_7.19606628414095_0.327803457540959 chr3 52554421 52555311 + 0.327803457540959 NA Intergenic Intergenic -184858 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak2_118_906_0.0221136297111215_9.83601555538408_0.327772567162077 chr16 14162227 14164403 + 0.327772567162077 NA promoter-TSS (NM_001114085) promoter-TSS (NM_001114085) 40 NM_001114085 67203 Mm.24105 NM_023317 ENSMUSG00000022678 Nde1 2810027M15Rik|AU042936|AW822251|Nude|mNudE nudE neurodevelopment protein 1 protein-coding common_peak1_13_63_0.0599524388315702_6.02997621941578_0.327760028623774-2 chr19 9107981 9108321 + 0.327760028623774 NA Intergenic B3|SINE|B2 -20195 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_13_63_0.0599524388315702_6.02997621941578_0.327760028623774 chr13 41371398 41371804 + 0.327760028623774 NA intron (NM_001111324, intron 2 of 7) intron (NM_001111324, intron 2 of 7) -12600 NM_017464 18003 Mm.288980 NM_017464 ENSMUSG00000021365 Nedd9 Cas-L|CasL|HEF1|MEF1|Nedd-9|p105 neural precursor cell expressed, developmentally down-regulated gene 9 protein-coding unique_peak2_13_63_0.0599524388315702_6.02997621941578_0.327760028623774 chr11 88110573 88111098 + 0.327760028623774 NA intron (NM_198013, intron 1 of 10) B1_Mur3|SINE|Alu 11689 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak2_42_256_0.0401026210600719_8.02567585972391_0.327756864307441 chr14 20923597 20925003 + 0.327756864307441 NA Intergenic Intergenic -5133 NM_009502 22330 Mm.279361 NM_009502 ENSMUSG00000021823 Vcl 9430097D22|AA571387|AI462105|AW545629 vinculin protein-coding unique_peak2_42_256_0.0401026210600719_8.02567585972391_0.327756864307441 chr1 79764842 79766470 + 0.327756864307441 NA Intergenic MTD|LTR|ERVL-MaLR -3887 NM_027057 69368 Mm.293273 NM_027057 ENSMUSG00000073643 Wdfy1 1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435 WD repeat and FYVE domain containing 1 protein-coding common_peak2_42_256_0.0401026210600719_8.02567585972391_0.327756864307441-2 chr7 4331392 4332774 + 0.327756864307441 NA Intergenic L1_Mus1|LINE|L1 -5641 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak1_221_1957_0.0153654289473568_10.9428477640774_0.327732183640991 chr13 43559440 43561084 + 0.327732183640991 NA promoter-TSS (NM_001081059) promoter-TSS (NM_001081059) -71 NM_001081059 76137 Mm.426290 NM_001081059 ENSMUSG00000021371 Mcur1 6230416A05Rik|AU015498|AV136929|AW554392|C88263|Ccdc90a mitochondrial calcium uniporter regulator 1 protein-coding common_peak1_51_325_0.0333054015962109_8.36538085502918_0.327721153971741 chr8 123442866 123443602 + 0.327721153971741 NA promoter-TSS (NM_001281803) promoter-TSS (NM_001281803) -25 NM_001281803 23854 Mm.275127 NM_054046 ENSMUSG00000001482 Def8 AI449518|D8Ertd713e|DEF-8 differentially expressed in FDCP 8 protein-coding common_peak2_51_325_0.0333054015962109_8.36538085502918_0.327721153971741-2 chr9 63698631 63699978 + 0.327721153971741 NA intron (NM_016769, intron 1 of 8) MIRb|SINE|MIR 58690 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak2_51_325_0.0333054015962109_8.36538085502918_0.327721153971741 chr14 70350681 70351863 + 0.327721153971741 NA intron (NM_001135151, intron 1 of 9) CpG 152 NM_144808 213053 Mm.270647 NM_144808 ENSMUSG00000022094 Slc39a14 FAD-123|ZIP-14|Zip14|fad123 solute carrier family 39 (zinc transporter), member 14 protein-coding common_peak2_51_325_0.0333054015962109_8.36538085502918_0.327721153971741-3 chr9 106198785 106200018 + 0.327721153971741 NA promoter-TSS (NM_198931) promoter-TSS (NM_198931) -168 NM_026447 67905 Mm.23018 NM_026447 ENSMUSG00000020253 Ppm1m 2810423O19Rik|AW610647|C77250|PP2Ceta protein phosphatase 1M protein-coding common_peak1_92_694_-0.0300524467232801_9.42584294424923_0.327719763277461 chr13 24831591 24832436 + 0.327719763277461 NA promoter-TSS (NM_025790) promoter-TSS (NM_025790) 354 NM_019551 56196 Mm.427162 NM_019551 ENSMUSG00000035958 Tdp2 D13Ertd656e|Ttrap tyrosyl-DNA phosphodiesterase 2 protein-coding common_peak1_41_265_-0.0511954805163342_8.02968469524302_0.32765445447807 chr2 58906926 58907727 + 0.32765445447807 NA intron (NM_001001178, intron 10 of 13) intron (NM_001001178, intron 10 of 13) 111280 NM_001001178 227933 Mm.330234 NM_177650 ENSMUSG00000036641 Ccdc148 5830402J09 coiled-coil domain containing 148 protein-coding common_peak1_41_265_-0.0511954805163342_8.02968469524302_0.32765445447807-2 chr7 4300406 4301095 + 0.32765445447807 NA Intergenic Intergenic 26561 NM_008848 18729 Mm.326531 NM_008848 Pira6 12M1|Pira10|p91B paired-Ig-like receptor A6 protein-coding common_peak2_130_1052_-0.0232024591788438_10.0286884914363_0.327653672735977 chr9 32659329 32662655 + 0.327653672735977 NA Intergenic Intergenic -35050 NM_011808 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_130_1052_-0.0232024591788438_10.0286884914363_0.327653672735977 chr7 24906617 24908253 + 0.327653672735977 NA intron (NM_001130152, intron 1 of 28) intron (NM_001130152, intron 1 of 28) 3089 NM_001130152 16801 Mm.3181 NM_008488 ENSMUSG00000040940 Arhgef1 Lbcl2|Lsc Rho guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak1_61_404_0.0315164181486747_8.67753630684632_0.327576774395042 chr4 53217453 53218345 + 0.327576774395042 NA Intergenic Intergenic -28297 NR_040665 78180 Mm.243847 NR_040665 ENSMUSG00000086947 4930522O17Rik - RIKEN cDNA 4930522O17 gene ncRNA common_peak1_81_595_-0.0311129442103795_9.20361204835697_0.327574769449951 chr11 114968202 114969480 + 0.327574769449951 NA Intergenic Intergenic -8424 NM_199225 387565 Mm.351450 NM_199225 ENSMUSG00000058728 Cd300c Clm6 CD300C molecule protein-coding common_peak1_254_2370_-0.0155035834762316_11.2035281557439_0.327551910563128 chr12 16526381 16529823 + 0.327551910563128 NA Intergenic Intergenic 61668 NM_015763 14245 Mm.153625 NM_015763 ENSMUSG00000020593 Lpin1 4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188 lipin 1 protein-coding common_peak1_33_205_-0.0563519550226914_7.65832454967187_0.327433841594206 chr16 43659244 43659969 + 0.327433841594206 NA intron (NM_001146325, intron 2 of 3) intron (NM_001146325, intron 2 of 3) 4578 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding unique_peak2_33_205_-0.0563519550226914_7.65832454967187_0.327433841594206 chr5 21202957 21204289 + 0.327433841594206 NA intron (NM_175437, intron 3 of 30) L1MDa|LINE|L1 17356 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak2_34_198_0.044821093979885_7.65903516753359_0.327433841594206-2 chr10 18064196 18065515 + 0.327433841594206 NA intron (NM_009048, intron 1 of 19) intron (NM_009048, intron 1 of 19) 8915 NM_001111065 19707 Mm.4479 NM_009048 ENSMUSG00000019854 Reps1 BB161292 RalBP1 associated Eps domain containing protein protein-coding common_peak1_34_198_0.044821093979885_7.65903516753359_0.327433841594206 chr12 25298972 25299600 + 0.327433841594206 NA Intergenic Intergenic 170112 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_34_198_0.044821093979885_7.65903516753359_0.327433841594206 chr1 189866251 189867715 + 0.327433841594206 NA intron (NM_008976, intron 18 of 18) ID4|SINE|ID 55305 NM_026796 226830 Mm.156895 NM_026796 ENSMUSG00000026603 Smyd2 1110020E07Rik|4930402C15|KMT3C|Zmynd14 SET and MYND domain containing 2 protein-coding common_peak1_388_3969_-0.0118052780432425_11.9490206530087_0.327421678113121 chr4 59203540 59206968 + 0.327421678113121 NA intron (NM_011673, intron 1 of 8) intron (NM_011673, intron 1 of 8) 15704 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak1_93_703_-0.0296882200249211_9.44458750862483_0.327374874650599 chrX 12159659 12160903 + 0.327374874650599 NA promoter-TSS (NM_001168321) promoter-TSS (NM_001168321) 65 NR_045434 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_147_1186_0.0199040539422182_10.223056246613_0.327298761787212 chr11 58214347 58215741 + 0.327298761787212 NA promoter-TSS (NM_019440) promoter-TSS (NM_019440) 67 NM_019440 54396 Mm.458517 NM_019440 ENSMUSG00000069874 Irgm2 AI481100|GTPI|Ifggd2|Iigp2 immunity-related GTPase family M member 2 protein-coding common_peak2_276_2571_0.0135451217195826_11.3354474881877_0.327296214964169 chr17 53478260 53480662 + 0.327296214964169 NA 5' UTR (NM_025887, exon 1 of 6) 5' UTR (NM_025887, exon 1 of 6) 227 NM_025887 271457 Mm.329123 NM_025887 ENSMUSG00000017831 Rab5a 2410015H04Rik|AI663973|AU021172|nnyRab5a RAB5A, member RAS oncogene family protein-coding common_peak1_72_495_0.0281227159987534_8.96825766838625_0.32727909156597 chr7 141099322 141100709 + 0.32727909156597 NA intron (NM_023059, intron 1 of 9) CpG 531 NM_023059 24058 Mm.38017 NM_023059 ENSMUSG00000025494 Sigirr AI256711|TIR8 single immunoglobulin and toll-interleukin 1 receptor (TIR) domain protein-coding common_peak1_52_332_0.0363633983718508_8.39756006625719_0.327165880968832 chr1 75191370 75192071 + 0.327165880968832 NA promoter-TSS (NR_051998) promoter-TSS (NR_051998) 290 NM_001003917 245860 Mm.238266 NM_001003917 ENSMUSG00000033124 Atg9a AU019532|Apg9l1|Atg9|Atg9l1 autophagy related 9A protein-coding common_peak1_106_822_-0.0257782010658527_9.6718595198887_0.327141273288658 chr13 30544466 30545482 + 0.327141273288658 NA intron (NM_025710, intron 1 of 1) CpG 342 NM_025710 66694 Mm.181933 NM_025710 ENSMUSG00000038462 Uqcrfs1 4430402G14Rik|AI875505 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding common_peak2_148_1196_0.0197175651641182_10.2350662195256_0.327080669599356 chr11 106031767 106034589 + 0.327080669599356 NA intron (NM_001037712, intron 12 of 12) IAPEz-int|LTR|ERVK -3694 NM_027946 71833 Mm.307455 NM_027946 ENSMUSG00000049354 Dcaf7 1700012F10Rik|2610037L01Rik|C86529|HAN11|Wdr68 DDB1 and CUL4 associated factor 7 protein-coding common_peak1_108_813_0.0228572512633889_9.68031360989794_0.326982054302102 chr17 73107331 73108696 + 0.326982054302102 NA promoter-TSS (NM_001081071) promoter-TSS (NM_001081071) 28 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding common_peak1_42_272_-0.0470299706659016_8.0692421555869_0.326958987170587-2 chr4 126204391 126205280 + 0.326958987170587 NA Intergenic Intergenic -2125 NM_146153 230753 Mm.29813 NM_146153 ENSMUSG00000043962 Thrap3 9330151F09Rik|B230333E16Rik|Trap150 thyroid hormone receptor associated protein 3 protein-coding common_peak1_42_272_-0.0470299706659016_8.0692421555869_0.326958987170587 chr3 106463571 106464352 + 0.326958987170587 NA Intergenic Intergenic -18470 NM_001093754 72121 Mm.14816 NM_028110 ENSMUSG00000027901 Dennd2d 2010308M01Rik|AI451421 DENN/MADD domain containing 2D protein-coding common_peak1_43_264_0.0365615044297449_8.06812930166543_0.326958987170587-2 chr2 173275448 173276277 + 0.326958987170587 NA intron (NM_022995, intron 1 of 3) GC_rich|Low_complexity|Low_complexity 671 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_43_264_0.0365615044297449_8.06812930166543_0.326958987170587 chr18 88971557 88972594 + 0.326958987170587 NA promoter-TSS (NR_105777) promoter-TSS (NR_105777) 45 NR_105777 102466633 NR_105777 ENSMUSG00000098676 Mir6359 Gm27328|mmu-mir-6359 microRNA 6359 ncRNA common_peak2_147_1220_-0.0208392114032794_10.2434278792858_0.326930147339222 chr11 17257226 17258762 + 0.326930147339222 NA intron (NM_020558, intron 1 of 4) intron (NM_020558, intron 1 of 4) 376 NM_020558 57316 Mm.287982 NM_020558 ENSMUSG00000000581 C1d 1110036E10Rik|AI875855|SUN-CoR C1D nuclear receptor co-repressor protein-coding common_peak2_73_503_0.0291160388978504_8.99183794294884_0.326866110205109 chr11 103101543 103103816 + 0.326866110205109 NA intron (NM_025988, intron 1 of 9) intron (NM_025988, intron 1 of 9) 991 NM_025988 67131 Mm.390367 NM_025988 ENSMUSG00000056938 Acbd4 2010009P05Rik|2010015A21Rik|AI849317 acyl-Coenzyme A binding domain containing 4 protein-coding common_peak1_262_2412_0.0138288190597109_11.2435266097456_0.326829773240201 chr11 84818189 84820063 + 0.326829773240201 NA exon (NM_145433, exon 1 of 5) exon (NM_145433, exon 1 of 5) 389 NM_145433 217038 Mm.280825 NM_145433 ENSMUSG00000018405 Mrm1 A530065E19Rik|ENSMUSG00000054212 mitochondrial rRNA methyltransferase 1 protein-coding common_peak2_120_955_-0.0242999633452996_9.8887168263081_0.326812918850125 chr12 100507875 100510921 + 0.326812918850125 NA intron (NM_001033213, intron 1 of 19) intron (NM_001033213, intron 1 of 19) 11424 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak1_19_108_-0.0770500971461496_6.72965927620385_0.326760750174164-3 chr18 60499088 60499632 + 0.326760750174164 NA intron (NM_134133, intron 1 of 1) ORR1C2|LTR|ERVL-MaLR 2623 NM_134133 106878 Mm.273197 NM_134133 ENSMUSG00000038059 Smim3 2010002N04Rik|AI195350|AW561905|Nid67|cI-41 small integral membrane protein 3 protein-coding common_peak1_19_108_-0.0770500971461496_6.72965927620385_0.326760750174164-2 chr16 55950330 55950789 + 0.326760750174164 NA Intergenic B3|SINE|B2 -15711 NM_001159365 74201 Mm.178427 NM_028815 ENSMUSG00000022604 Cep97 2810403B08Rik|4932439K18Rik|AA437768|E130116N02Rik|Lrriq2 centrosomal protein 97 protein-coding unique_peak2_19_108_-0.0770500971461496_6.72965927620385_0.326760750174164 chr11 20531876 20532608 + 0.326760750174164 NA Intergenic CpG -11011 NM_021372 58172 Mm.339676 NM_021372 ENSMUSG00000049800 Sertad2 AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127 SERTA domain containing 2 protein-coding unique_peak2_19_108_-0.0770500971461496_6.72965927620385_0.326760750174164-3 chr17 83267267 83268073 + 0.326760750174164 NA Intergenic Intergenic 52387 NM_134117 106522 Mm.311974 NM_134117 ENSMUSG00000024247 Pkdcc AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346 protein kinase domain containing, cytoplasmic protein-coding unique_peak2_19_108_-0.0770500971461496_6.72965927620385_0.326760750174164-4 chr18 46998215 46998924 + 0.326760750174164 NA intron (NM_178377, intron 5 of 6) Lx9|LINE|L1 39693 NM_178377 69456 Mm.210734 NM_178377 ENSMUSG00000042705 Commd10 2310003A05Rik|AU019438|DRWMS2 COMM domain containing 10 protein-coding common_peak1_19_108_-0.0770500971461496_6.72965927620385_0.326760750174164-5 chr9 111148442 111148912 + 0.326760750174164 NA intron (NM_001164838, intron 3 of 14) intron (NM_001164838, intron 3 of 14) 30566 NM_001164838 71268 Mm.302287 NM_027742 ENSMUSG00000032497 Lrrfip2 5133400F20Rik|AI850587 leucine rich repeat (in FLII) interacting protein 2 protein-coding unique_peak2_19_108_-0.0770500971461496_6.72965927620385_0.326760750174164-2 chr14 54023813 54024890 + 0.326760750174164 NA Intergenic MTD|LTR|ERVL-MaLR 229578 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_19_108_-0.0770500971461496_6.72965927620385_0.326760750174164 chr13 113135605 113136069 + 0.326760750174164 NA promoter-TSS (NR_131045) promoter-TSS (NR_131045) -239 NR_131045 76720 Mm.54263 NR_131045 1700084D21Rik - RIKEN cDNA 1700084D21 gene ncRNA common_peak1_19_108_-0.0770500971461496_6.72965927620385_0.326760750174164-4 chr5 111893528 111893989 + 0.326760750174164 NA Intergenic Intergenic -132030 NR_045833 269683 Mm.136946 NM_207252 ENSMUSG00000085271 E130006D01Rik Gm16018|Gm681|OTTMUSG00000029083 RIKEN cDNA E130006D01 gene ncRNA common_peak1_27_150_0.0481600106928468_7.2624847446715_0.326578367126945-4 chr2 90489616 90490191 + 0.326578367126945 NA intron (NM_008982, intron 1 of 23) intron (NM_008982, intron 1 of 23) -10729 NM_001135657 19271 Mm.330393 NM_008982 ENSMUSG00000025314 Ptprj AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1 protein tyrosine phosphatase, receptor type, J protein-coding unique_peak2_27_150_0.0481600106928468_7.2624847446715_0.326578367126945 chr3 95356483 95357467 + 0.326578367126945 NA intron (NM_001163642, intron 1 of 21) CpG 227 NM_001163641 84505 Mm.490259 NM_018877 ENSMUSG00000015697 Setdb1 AU022152|ESET|KMT1E|mKIAA0067 SET domain, bifurcated 1 protein-coding common_peak1_27_150_0.0481600106928468_7.2624847446715_0.326578367126945-3 chr19 57075757 57076504 + 0.326578367126945 NA intron (NM_001103178, intron 4 of 19) intron (NM_001103178, intron 4 of 19) 42894 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak1_27_150_0.0481600106928468_7.2624847446715_0.326578367126945-5 chr2 166678657 166679262 + 0.326578367126945 NA intron (NR_105783, intron 2 of 2) intron (NR_105783, intron 2 of 2) 6241 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_27_150_0.0481600106928468_7.2624847446715_0.326578367126945-6 chr9 56207338 56207816 + 0.326578367126945 NA exon (NM_172924, exon 7 of 7) exon (NM_172924, exon 7 of 7) -46507 NM_019793 56434 Mm.28484 NM_019793 ENSMUSG00000032324 Tspan3 1700055K04Rik|TM4-A|Tm4sf8 tetraspanin 3 protein-coding common_peak1_27_150_0.0481600106928468_7.2624847446715_0.326578367126945 chr11 29130648 29131249 + 0.326578367126945 NA intron (NM_027869, intron 1 of 27) CpG 197 NM_027869 71701 Mm.211131 NM_027869 ENSMUSG00000020464 Pnpt1 1200003F12Rik|Old35|PNPase|Pnptl1 polyribonucleotide nucleotidyltransferase 1 protein-coding common_peak1_27_150_0.0481600106928468_7.2624847446715_0.326578367126945-2 chr15 36496193 36496862 + 0.326578367126945 NA intron (NM_175134, intron 1 of 4) CpG 264 NM_175134 68839 Mm.396537 NM_175134 ENSMUSG00000048307 Ankrd46 1110054N06Rik|AI314978|AI987733 ankyrin repeat domain 46 protein-coding common_peak2_63_420_0.0318014624314849_8.73357715428214_0.326577319239284 chr10 127621262 127622651 + 0.326577319239284 NA promoter-TSS (NM_008512) promoter-TSS (NM_008512) -808 NM_008512 16971 Mm.271854 NM_008512 ENSMUSG00000040249 Lrp1 A2mr|AI316852|CD91|Lrp|b2b1554Clo low density lipoprotein receptor-related protein 1 protein-coding common_peak1_35_205_0.0447971458758047_7.70889910012112_0.326547296812185 chr4 135313942 135314706 + 0.326547296812185 NA Intergenic B1_Mur3|SINE|Alu 38890 NM_016799 51796 Mm.1963 NM_016799 ENSMUSG00000028809 Srrm1 AA407769|POP101|Srm160 serine/arginine repetitive matrix 1 protein-coding unique_peak2_35_205_0.0447971458758047_7.70889910012112_0.326547296812185 chr4 101206907 101208669 + 0.326547296812185 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 57494 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_34_212_-0.0532639057023045_7.70807766737469_0.326547296812185 chr4 62738053 62739096 + 0.326547296812185 NA Intergenic Intergenic 64600 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_34_212_-0.0532639057023045_7.70807766737469_0.326547296812185 chr19 46613406 46614053 + 0.326547296812185 NA intron (NM_001177812, intron 2 of 4) B3|SINE|B2 -9672 NM_001177813 226178 Mm.329895 NM_146099 ENSMUSG00000047731 Wbp1l D19Wsu162e|Opal1 WW domain binding protein 1 like protein-coding common_peak1_121_965_-0.0247476166024452_9.90350557053455_0.326543639965219 chr16 30388122 30389788 + 0.326543639965219 NA promoter-TSS (NM_001128094) promoter-TSS (NM_001128094) -425 NM_001128096 224088 Mm.8924 NM_001128094 ENSMUSG00000022533 Atp13a3 AU022875|Gm1745|Gm541|Gm542 ATPase type 13A3 protein-coding common_peak2_97_713_0.0237082840679417_9.49163440606307_0.326532694006038 chr17 26570993 26573133 + 0.326532694006038 NA intron (NM_026170, intron 1 of 9) intron (NM_026170, intron 1 of 9) 10551 NM_026170 67458 Mm.30496 NM_026170 ENSMUSG00000001576 Ergic1 1200007D18Rik|maa-136 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein-coding common_peak2_62_432_-0.0366140547749421_8.73991618733925_0.326457654162024 chr15 79074706 79075854 + 0.326457654162024 NA promoter-TSS (NM_145139) promoter-TSS (NM_145139) 57 NM_145139 223691 Mm.206404 NM_145139 ENSMUSG00000033047 Eif3l 0610011H21Rik|D15N1e|Eif3eip|Eif3ip|Eif3s6ip|HSP-66Y|PAF67 eukaryotic translation initiation factor 3, subunit L protein-coding common_peak1_62_432_-0.0366140547749421_8.73991618733925_0.326457654162024 chr2 155073705 155074531 + 0.326457654162024 NA intron (NM_016661, intron 1 of 9) CpG 379 NM_016661 269378 Mm.330692 NM_016661 ENSMUSG00000027597 Ahcy AA987153|AL024110|CuBP|SAHH S-adenosylhomocysteine hydrolase protein-coding common_peak1_84_622_-0.0314465051715107_9.26736510043825_0.32641124334896 chr2 30636055 30637366 + 0.32641124334896 NA Intergenic Intergenic 41666 NM_030137 78617 Mm.40413 NM_030137 ENSMUSG00000047363 Cstad 9530039B02Rik CSA-conditional, T cell activation-dependent protein protein-coding common_peak2_137_1089_0.0190952117688621_10.0996600255487_0.326367364134846 chr2 103660933 103665199 + 0.326367364134846 NA intron (NM_178890, intron 1 of 16) intron (NM_178890, intron 1 of 16) 96756 NM_178890 99382 Mm.35850 NM_178890 ENSMUSG00000032724 Abtb2 AW539457|BPOZ-2 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding common_peak2_212_1902_-0.016765784273721_10.8856769541372_0.326343880169392 chr7 28865145 28868207 + 0.326343880169392 NA TTS (NM_008496) TTS (NM_008496) 2290 NM_008496 16858 Mm.20973 NM_008496 ENSMUSG00000053522 Lgals7 Galectin-7|Pig1 lectin, galactose binding, soluble 7 protein-coding common_peak2_150_1250_-0.0203456891802691_10.2786932295757_0.326304277954381 chr9 14276158 14277676 + 0.326304277954381 NA intron (NM_030261, intron 1 of 9) intron (NM_030261, intron 1 of 9) 616 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding common_peak1_44_271_0.0387157963142926_8.10682073940749_0.326298929317254 chrX 21061554 21062541 + 0.326298929317254 NA promoter-TSS (NM_001111076) promoter-TSS (NM_001111076) -9 NM_001111076 319535 Mm.170163 NM_001013387 ENSMUSG00000054737 Zfp182 6330583I20Rik|Znf182 zinc finger protein 182 protein-coding common_peak2_182_1542_0.017131620629522_10.6000881568855_0.32629285220036 chr2 166560708 166565940 + 0.32629285220036 NA Intergenic MT2A|LTR|ERVL -109394 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak1_20_105_0.0495541892352991_6.75269754918085_0.326281951313122 chr2 165854126 165854617 + 0.326281951313122 NA intron (NM_001291158, intron 2 of 23) intron (NM_001291158, intron 2 of 23) 3802 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_20_105_0.0495541892352991_6.75269754918085_0.326281951313122 chr10 98897586 98898320 + 0.326281951313122 NA Intergenic Intergenic -17199 NM_026482 67972 Mm.166944 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 protein-coding common_peak1_20_105_0.0495541892352991_6.75269754918085_0.326281951313122-2 chr4 46590307 46590800 + 0.326281951313122 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) 11376 NM_001164804 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding unique_peak2_20_105_0.0495541892352991_6.75269754918085_0.326281951313122 chrX 101731579 101732415 + 0.326281951313122 NA exon (NM_009910, exon 2 of 2) exon (NM_009910, exon 2 of 2) 2150 NM_009910 12766 Mm.12876 NM_009910 ENSMUSG00000050232 Cxcr3 Cd183|Cmkar3 chemokine (C-X-C motif) receptor 3 protein-coding common_peak2_165_1403_-0.0192090399498568_10.4457227003296_0.326265359670601 chr11 5148932 5152730 + 0.326265359670601 NA intron (NM_080595, intron 1 of 14) intron (NM_080595, intron 1 of 14) 1391 NM_080595 140703 Mm.840 NM_080595 ENSMUSG00000034164 Emid1 AW122071|CO-5|Emu1 EMI domain containing 1 protein-coding common_peak1_136_1111_-0.0226035161886475_10.1076393146292_0.326229533778094 chr9 72661385 72663658 + 0.326229533778094 NA 5' UTR (NM_010890, exon 1 of 29) 5' UTR (NM_010890, exon 1 of 29) 174 NM_010890 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|Nedd4-1|Nedd4a|mKIAA0093 neural precursor cell expressed, developmentally down-regulated 4 protein-coding unique_peak2_13_71_-0.109972562610742_6.11493872013694_0.326210013932454 chr4 133117819 133118449 + 0.326210013932454 NA Intergenic Intergenic -12499 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding unique_peak2_13_71_-0.109972562610742_6.11493872013694_0.326210013932454-2 chr8 125390881 125391580 + 0.326210013932454 NA Intergenic Intergenic 101480 NM_001081337 244668 Mm.271668 NM_001081337 ENSMUSG00000001995 Sipa1l2 BC058408|mKIAA1389 signal-induced proliferation-associated 1 like 2 protein-coding common_peak1_43_280_-0.0480162663406194_8.11041818705062_0.326207368787348-2 chr8 31111809 31112442 + 0.326207368787348 NA 5' UTR (NM_175136, exon 1 of 6) 5' UTR (NM_175136, exon 1 of 6) 279 NM_175136 68867 Mm.29532 NM_175136 ENSMUSG00000039328 Rnf122 1110063C11Rik ring finger protein 122 protein-coding common_peak1_43_280_-0.0480162663406194_8.11041818705062_0.326207368787348 chr19 29064093 29064897 + 0.326207368787348 NA Intergenic Intergenic -2806 NR_045687 100503337 Mm.103412 NR_045687 Gm9895 ENSMUSG00000052976 predicted gene 9895 ncRNA common_peak2_151_1261_-0.0212950580265918_10.2908486659693_0.326082304787761 chr1 153747375 153750525 + 0.326082304787761 NA promoter-TSS (NM_011882) promoter-TSS (NM_011882) -476 NM_011882 24014 Mm.259254 NM_011882 ENSMUSG00000066800 Rnasel E230029I04Rik ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) protein-coding common_peak2_216_1903_0.0154005506918331_10.9025180386539_0.32605283701348 chr2 158027683 158029611 + 0.32605283701348 NA 5' UTR (NM_027434, exon 1 of 7) 5' UTR (NM_027434, exon 1 of 7) 150 NM_001291135 70470 Mm.290810 NM_027434 ENSMUSG00000027651 Rprd1b 2610304G08Rik|2810446G03Rik|Crept regulation of nuclear pre-mRNA domain containing 1B protein-coding common_peak1_168_1398_0.0176336013646559_10.4589970478471_0.326032193907147 chr3 88685737 88686629 + 0.326032193907147 NA intron (NM_028814, intron 1 of 13) CpG 389 NM_028814 74200 Mm.251800 NM_028814 ENSMUSG00000028060 2810403A07Rik A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907 RIKEN cDNA 2810403A07 gene protein-coding common_peak2_63_440_-0.0351569600596413_8.7670563655277_0.325989998273926 chr3 32529061 32530315 + 0.325989998273926 NA 5' UTR (NM_024200, exon 1 of 18) 5' UTR (NM_024200, exon 1 of 18) 206 NM_024200 67414 Mm.290414 NM_024200 ENSMUSG00000027668 Mfn1 2310002F04Rik|6330416C07Rik|D3Ertd265e|HR2|mKIAA4032 mitofusin 1 protein-coding common_peak1_54_348_0.0342077921762627_8.46418712229778_0.32597950529749-2 chrX 36743518 36744600 + 0.32597950529749 NA intron (NR_075097, intron 1 of 3) intron (NR_075097, intron 1 of 3) 427 NR_075096 194744 Mm.336014 NM_001085497 ENSMUSG00000037636 Slc25a43 Gm8 solute carrier family 25, member 43 protein-coding common_peak1_54_348_0.0342077921762627_8.46418712229778_0.32597950529749 chr3 89269893 89270775 + 0.32597950529749 NA intron (NM_009057, intron 1 of 5) intron (NM_009057, intron 1 of 5) 236 NM_009057 19729 Mm.17958 NM_009057 ENSMUSG00000027953 Slc50a1 MmSWEET1|Rag1ap1|Rga solute carrier family 50 (sugar transporter), member 1 protein-coding common_peak2_110_860_-0.0259512600321479_9.73689379738077_0.32597802435191 chr17 84224710 84226378 + 0.32597802435191 NA intron (NM_183021, intron 35 of 37) intron (NM_183021, intron 35 of 37) -37597 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak2_305_2960_-0.0134511707104572_11.5251431898223_0.325935324976731 chr11 67478082 67483016 + 0.325935324976731 NA Intergenic Intergenic -52449 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_167_1424_-0.0194346265818996_10.4670288906485_0.325890836811368 chr13 119789906 119791763 + 0.325890836811368 NA promoter-TSS (NM_028245) promoter-TSS (NM_028245) -28 NM_001302549 72465 Mm.139115 NM_028245 ENSMUSG00000094870 Zfp131 2610109I01Rik|AW558871|Znf131 zinc finger protein 131 protein-coding common_peak1_271_2515_0.0130692988403069_11.3034508562994_0.325778171540727 chr2 121412729 121415004 + 0.325778171540727 NA promoter-TSS (NM_007952) promoter-TSS (NM_007952) -36 NM_007952 14827 Mm.263177 NM_007952 ENSMUSG00000027248 Pdia3 58kDa|ERp57|ERp60|ERp61|Erp|Grp58|PDI|PDI-Q2|PI-PLC|PLC[a]|Plca protein disulfide isomerase associated 3 protein-coding common_peak1_98_748_-0.027367444644586_9.53513818613646_0.325776019758254 chr2 25150949 25152794 + 0.325776019758254 NA Intergenic ID_B1|SINE|B4 -28887 NM_025980 67122 Mm.46539 NM_025980 ENSMUSG00000078202 Nrarp 2700054M22Rik Notch-regulated ankyrin repeat protein protein-coding common_peak1_35_219_-0.0500620404656367_7.75632869329184_0.325718354445951 chr14 121408943 121409821 + 0.325718354445951 NA Intergenic Intergenic -30152 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_35_219_-0.0500620404656367_7.75632869329184_0.325718354445951-2 chr4 95194027 95194668 + 0.325718354445951 NA Intergenic Intergenic -142125 NM_010591 16476 Mm.275071 NM_010591 ENSMUSG00000052684 Jun AP-1|Junc|c-jun jun proto-oncogene protein-coding common_peak2_186_1584_0.0166505490752549_10.6385923995644_0.325626989184649 chr1 74396151 74398629 + 0.325626989184649 NA TTS (NM_153088) TTS (NM_153088) 3080 NR_029743 387219 NR_029743 ENSMUSG00000065468 Mir26b Mirn26b|mir-26b|mmu-mir-26b microRNA 26b ncRNA common_peak1_27_162_-0.0621634042131518_7.3176464521245_0.325614160962591 chr11 22814869 22815485 + 0.325614160962591 NA Intergenic B3|SINE|B2 44558 NM_016888 53625 Mm.395495 NM_016888 ENSMUSG00000051650 B3gnt2 AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding common_peak1_36_213_0.0383166648102637_7.76062531880628_0.325604310497223-2 chr3 122245503 122246066 + 0.325604310497223 NA 5' UTR (NM_008129, exon 1 of 7) 5' UTR (NM_008129, exon 1 of 7) 227 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding common_peak2_36_213_0.0383166648102637_7.76062531880628_0.325604310497223 chr9 100521095 100522855 + 0.325604310497223 NA intron (NM_010878, intron 1 of 3) B1_Mur2|SINE|Alu 24078 NM_010878 17973 Mm.181485 NM_010878 ENSMUSG00000032475 Nck1 6330586M15Rik|D230010O13Rik|Nck|Nck-1 non-catalytic region of tyrosine kinase adaptor protein 1 protein-coding common_peak1_36_213_0.0383166648102637_7.76062531880628_0.325604310497223 chr15 77817453 77818255 + 0.325604310497223 NA intron (NM_022410, intron 1 of 40) MER20|DNA|hAT-Charlie 24321 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_36_213_0.0383166648102637_7.76062531880628_0.325604310497223-3 chr8 120719278 120719981 + 0.325604310497223 NA Intergenic Intergenic -16729 NM_008320 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_65_437_0.029145199246063_8.78935965922421_0.325594687116747 chr17 71223661 71225866 + 0.325594687116747 NA intron (NM_022882, intron 3 of 19) intron (NM_022882, intron 3 of 19) 20109 NM_001164885 64898 Mm.227924 NM_022882 ENSMUSG00000024052 Lpin2 2610511G02Rik|AI481352|AW742896 lipin 2 protein-coding common_peak2_45_279_0.035790098334898_8.14717806611242_0.325584564905059 chr1 131527755 131528745 + 0.325584564905059 NA promoter-TSS (NM_001081011) promoter-TSS (NM_001081011) 261 NM_175382 108900 Mm.31278 NM_175382 ENSMUSG00000055184 Fam72a 2700049P18Rik|P17 family with sequence similarity 72, member A protein-coding common_peak2_113_860_0.0212416033396874_9.76049022906669_0.325575163851679 chr12 117820298 117822904 + 0.325575163851679 NA Intergenic Intergenic -22260 NM_146040 217946 Mm.281149 NM_146040 ENSMUSG00000021175 Cdca7l BC006933|JPO2 cell division cycle associated 7 like protein-coding unique_peak2_14_69_0.0527611044663816_6.15566356917816_0.325500527219172 chr1 64448263 64448851 + 0.325500527219172 NA Intergenic Intergenic -84247 NM_133828 12912 Mm.422634 NM_009952 ENSMUSG00000025958 Creb1 2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1 cAMP responsive element binding protein 1 protein-coding unique_peak2_14_69_0.0527611044663816_6.15566356917816_0.325500527219172-3 chr5 121100319 121101043 + 0.325500527219172 NA Intergenic Intergenic -90589 NM_001302344 19894 Mm.181166 NM_011286 ENSMUSG00000029608 Rph3a 2900002P20Rik|AU022689|AW108370 rabphilin 3A protein-coding unique_peak2_14_69_0.0527611044663816_6.15566356917816_0.325500527219172-2 chr2 117261946 117262582 + 0.325500527219172 NA intron (NM_026620, intron 4 of 7) intron (NM_026620, intron 4 of 7) 12525 NM_026620 68215 Mm.219389 NM_026620 ENSMUSG00000027349 Fam98b 2610510H03Rik family with sequence similarity 98, member B protein-coding common_peak1_14_69_0.0527611044663816_6.15566356917816_0.325500527219172-3 chr6 128976095 128976515 + 0.325500527219172 NA intron (NM_001316752, intron 1 of 5) intron (NM_001316752, intron 1 of 5) -1276 NR_045009 100504591 Mm.441029 NR_045009 Gm15987 OTTMUSG00000028624 predicted gene 15987 ncRNA common_peak1_14_69_0.0527611044663816_6.15566356917816_0.325500527219172-2 chr2 165855185 165855624 + 0.325500527219172 NA intron (NM_001291158, intron 2 of 23) intron (NM_001291158, intron 2 of 23) 2769 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding unique_peak2_14_69_0.0527611044663816_6.15566356917816_0.325500527219172-4 chrX 167318899 167319507 + 0.325500527219172 NA intron (NM_001290755, intron 2 of 4) intron (NM_001290755, intron 2 of 4) 11368 NM_001290757 170743 Mm.23979 NM_133211 ENSMUSG00000044583 Tlr7 - toll-like receptor 7 protein-coding common_peak1_14_69_0.0527611044663816_6.15566356917816_0.325500527219172-4 chr6 130195789 130196118 + 0.325500527219172 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) -2841 NM_010651 16640 Mm.457996 NM_010651 ENSMUSG00000033024 Klra9 LY49I1|Ly49I killer cell lectin-like receptor subfamily A, member 9 protein-coding common_peak1_14_69_0.0527611044663816_6.15566356917816_0.325500527219172 chr10 39193177 39193581 + 0.325500527219172 NA Intergenic Intergenic -29585 NM_001127376 327743 Mm.208111 NM_001127376 ENSMUSG00000062074 Wisp3 CCN6|ENSMUSG00000062074|Gm735|WISP-3 WNT1 inducible signaling pathway protein 3 protein-coding common_peak1_64_449_-0.036866670884141_8.79534785577497_0.325484030664949 chr13 108337943 108339074 + 0.325484030664949 NA intron (NM_178683, intron 2 of 10) intron (NM_178683, intron 2 of 10) 22171 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak2_64_449_-0.036866670884141_8.79534785577497_0.325484030664949 chr16 13667390 13668839 + 0.325484030664949 NA promoter-TSS (NM_028761) promoter-TSS (NM_028761) 56 NM_028761 74108 Mm.182350 NM_028761 ENSMUSG00000022685 Parn 1200003I18Rik|DAN poly(A)-specific ribonuclease (deadenylation nuclease) protein-coding unique_peak2_28_157_0.0448825663354651_7.32622203134484_0.325460491862905 chr6 99434588 99435734 + 0.325460491862905 NA intron (NM_053202, intron 1 of 18) intron (NM_053202, intron 1 of 18) 184 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_28_157_0.0448825663354651_7.32622203134484_0.325460491862905 chr11 70813175 70813610 + 0.325460491862905 NA promoter-TSS (NM_001045526) promoter-TSS (NM_001045526) -831 NM_001045526 327957 Mm.164325 NM_001045526 ENSMUSG00000057135 Scimp A430084P05Rik SLP adaptor and CSK interacting membrane protein protein-coding common_peak2_54_366_-0.0383452344572977_8.50046363561457_0.325358323183499 chr5 86086146 86087775 + 0.325358323183499 NA intron (NM_001310639, intron 4 of 7) intron (NM_001310639, intron 4 of 7) 15214 NM_001310639 56792 Mm.131237 NM_019992 ENSMUSG00000029254 Stap1 AI586015|Brdg1|STAP-1 signal transducing adaptor family member 1 protein-coding common_peak1_100_766_-0.0262345738974759_9.5699654805542_0.325189529380406 chr4 34886065 34887468 + 0.325189529380406 NA Intergenic CpG -3818 NM_013889 30046 Mm.38193 NM_013889 ENSMUSG00000039967 Zfp292 5730450D02Rik|5830493J20Rik|9430062L07Rik|AI449016|Krox-10|Zfp-15|Zfp15|Zn-15|Zn-16|mKIAA0530 zinc finger protein 292 protein-coding common_peak2_100_766_-0.0262345738974759_9.5699654805542_0.325189529380406 chr15 89373096 89374405 + 0.325189529380406 NA promoter-TSS (NM_001111288) promoter-TSS (NM_001111288) 68 NM_001111288 100126824 Mm.287977 NM_001111288 ENSMUSG00000091780 Sco2 - SCO2 cytochrome c oxidase assembly protein protein-coding common_peak2_113_888_-0.0249285780932382_9.78357531978315_0.325185107501584 chr8 122985813 122990835 + 0.325185107501584 NA intron (NR_037865, intron 1 of 13) intron (NR_037865, intron 1 of 13) 53960 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak2_20_115_-0.080506351329074_6.81772781946303_0.325159453073329 chr16 11658946 11659929 + 0.325159453073329 NA intron (NM_001290148, intron 10 of 13) MTD|LTR|ERVL-MaLR -120265 NR_126430 73761 Mm.39183 NR_126430 4833415N18Rik - RIKEN cDNA 4833415N18 gene ncRNA common_peak1_20_115_-0.080506351329074_6.81772781946303_0.325159453073329 chrX 48234039 48234430 + 0.325159453073329 NA Intergenic RMER15|LTR|ERVL -22700 NM_028276 72554 Mm.336045 NM_028276 ENSMUSG00000063785 Utp14a 2700066J21Rik|JsdX|NY-CO-16|SDCCAG16|T25628|mKIAA0266 UTP14A small subunit processome component protein-coding common_peak2_20_115_-0.080506351329074_6.81772781946303_0.325159453073329 chr17 50157944 50158569 + 0.325159453073329 NA intron (NM_181397, intron 2 of 9) B4|SINE|B4 32241 NM_181397 76438 Mm.41854 NM_181397 ENSMUSG00000039316 Rftn1 2310015N21Rik|AI853526 raftlin lipid raft linker 1 protein-coding unique_peak2_20_115_-0.080506351329074_6.81772781946303_0.325159453073329-3 chr16 58534134 58535083 + 0.325159453073329 NA Intergenic Intergenic -11296 NM_018784 54613 Mm.212742 NM_018784 ENSMUSG00000022747 St3gal6 1700023B24Rik|AI930218|AW552396|Siat10|St3galVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding unique_peak2_20_115_-0.080506351329074_6.81772781946303_0.325159453073329-2 chr16 49868215 49869303 + 0.325159453073329 NA intron (NM_010581, intron 2 of 9) intron (NM_010581, intron 2 of 9) 13105 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_66_445_0.0296438002294188_8.81572180003501_0.325157963355362 chr12 3452912 3454541 + 0.325157963355362 NA intron (NM_172421, intron 3 of 10) intron (NM_172421, intron 3 of 10) 26869 NM_172421 75302 Mm.120475 NM_172421 ENSMUSG00000037486 Asxl2 4930556B16Rik|mKIAA1685 additional sex combs like 2 (Drosophila) protein-coding common_peak1_189_1616_0.015978137987906_10.6670930324676_0.325142761041844 chr10 67645888 67648461 + 0.325142761041844 NA Intergenic Intergenic -98219 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak2_76_551_-0.0318029160051019_9.09262299877562_0.325113644923284 chr3 95870721 95872132 + 0.325113644923284 NA promoter-TSS (NM_078479) promoter-TSS (NM_078479) -96 NR_040446 100042889 Mm.440109 NR_040446 ENSMUSG00000080727 C920021L13Rik - RIKEN cDNA C920021L13 gene ncRNA common_peak2_375_3806_-0.0114708335771745_11.8887034377737_0.325112980610047 chr4 32237791 32240905 + 0.325112980610047 NA Intergenic CpG -178087 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_127_1022_-0.0225002330610931_9.98734031321478_0.325110120981664 chr7 66384523 66385731 + 0.325110120981664 NA intron (NM_146191, intron 1 of 33) intron (NM_146191, intron 1 of 33) 3214 NM_146191 233328 Mm.33284 NM_146191 ENSMUSG00000015133 Lrrk1 AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790 leucine-rich repeat kinase 1 protein-coding common_peak1_143_1148_0.0183592127856222_10.1753426890389_0.325074172743435 chr7 105743470 105744926 + 0.325074172743435 NA TTS (NM_009906) TTS (NM_009906) 140 NM_020024 24075 Mm.274846 NM_020024 ENSMUSG00000043866 Taf10 30kDa|AU041226|TAFII30|Taf2h TATA-box binding protein associated factor 10 protein-coding common_peak2_174_1460_0.0168108385983565_10.5211458821027_0.324976948085164 chr4 34881086 34883802 + 0.324976948085164 NA intron (NM_013889, intron 1 of 7) CpG 504 NM_013889 30046 Mm.38193 NM_013889 ENSMUSG00000039967 Zfp292 5730450D02Rik|5830493J20Rik|9430062L07Rik|AI449016|Krox-10|Zfp-15|Zfp15|Zn-15|Zn-16|mKIAA0530 zinc finger protein 292 protein-coding unique_peak2_21_111_0.0524428206363474_6.83357633237578_0.324946824190313 chr1 54867830 54868797 + 0.324946824190313 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 58074 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_21_111_0.0524428206363474_6.83357633237578_0.324946824190313-5 chr8 120753902 120754391 + 0.324946824190313 NA intron (NM_008320, intron 7 of 8) PB1D10|SINE|Alu 15507 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding unique_peak2_21_111_0.0524428206363474_6.83357633237578_0.324946824190313-3 chr10 127521845 127522558 + 0.324946824190313 NA intron (NM_028230, intron 1 of 11) intron (NM_028230, intron 1 of 11) 243 NM_001252316 108037 Mm.29890 NM_028230 ENSMUSG00000025403 Shmt2 2700043D08Rik|AA408223|AA986903 serine hydroxymethyltransferase 2 (mitochondrial) protein-coding common_peak1_21_111_0.0524428206363474_6.83357633237578_0.324946824190313-3 chr6 127154806 127155234 + 0.324946824190313 NA intron (NR_040275, intron 1 of 1) CpG -3972 NM_009829 12444 Mm.333406 NM_009829 ENSMUSG00000000184 Ccnd2 2600016F06Rik|AI256817|BF642806|C86853|Vin-1|Vin1|cD2 cyclin D2 protein-coding common_peak1_21_111_0.0524428206363474_6.83357633237578_0.324946824190313-2 chr5 141017485 141018030 + 0.324946824190313 NA Intergenic Intergenic -17161 NM_175362 108723 Mm.46187 NM_175362 ENSMUSG00000036526 Card11 0610008L17Rik|2410011D02Rik|BIMP3|CARMA1 caspase recruitment domain family, member 11 protein-coding unique_peak2_21_111_0.0524428206363474_6.83357633237578_0.324946824190313-2 chr1 184064100 184065154 + 0.324946824190313 NA intron (NM_022019, intron 2 of 3) intron (NM_022019, intron 2 of 3) 30166 NM_022019 63953 Mm.404024 NM_022019 ENSMUSG00000039384 Dusp10 2610306G15Rik|AI158871|MKP-5|MKP5 dual specificity phosphatase 10 protein-coding common_peak1_21_111_0.0524428206363474_6.83357633237578_0.324946824190313-4 chr8 34143758 34144227 + 0.324946824190313 NA intron (NM_026609, intron 1 of 3) intron (NM_026609, intron 1 of 3) 2747 NM_026609 68192 Mm.34212 NM_026609 ENSMUSG00000031513 Leprotl1 1110067H13Rik|1520402O14Rik|AI854296 leptin receptor overlapping transcript-like 1 protein-coding common_peak1_21_111_0.0524428206363474_6.83357633237578_0.324946824190313 chr2 78991083 78991626 + 0.324946824190313 NA Intergenic Intergenic 122307 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_21_111_0.0524428206363474_6.83357633237578_0.324946824190313 chr11 79653764 79654425 + 0.324946824190313 NA intron (NM_175543, intron 3 of 14) intron (NM_175543, intron 3 of 14) 20992 NR_045898 72218 Mm.443271 NR_045898 ENSMUSG00000086569 Rab11fip4os2 1700020F10Rik|4930542H20Rik|Rab11fib4os2 RAB11 family interacting protein 4 (class II), opposite strand 2 ncRNA common_peak1_21_111_0.0524428206363474_6.83357633237578_0.324946824190313-6 chr9 120031263 120031786 + 0.324946824190313 NA Intergenic B1_Mus1|SINE|Alu -7926 NM_011724 22437 Mm.10117 NM_011724 ENSMUSG00000079243 Xirp1 AI415219|Cmya1 xin actin-binding repeat containing 1 protein-coding common_peak2_45_295_-0.044380250349084_8.18726324045441_0.324909482079812 chrX 74296489 74297763 + 0.324909482079812 NA promoter-TSS (NM_018794) promoter-TSS (NM_018794) 29 NM_018794 54411 Mm.21961 NM_018794 ENSMUSG00000019087 Atp6ap1 16A|AC45|AI316502|AW108110|Atp6ip1|Atp6s1|C7-1|CF2|VATPS1|XAP-3|mFLJ00383 ATPase, H+ transporting, lysosomal accessory protein 1 protein-coding common_peak1_45_295_-0.044380250349084_8.18726324045441_0.324909482079812 chr5 124074013 124074800 + 0.324909482079812 NA intron (NM_019875, intron 9 of 11) B1F|SINE|Alu 21392 NM_019875 56325 Mm.254839 NM_019875 ENSMUSG00000029408 Abcb9 TAPL|mKIAA1520 ATP-binding cassette, sub-family B (MDR/TAP), member 9 protein-coding common_peak2_78_546_0.0267020683207591_9.10874805695294_0.324851620058431 chr17 27792298 27794379 + 0.324851620058431 NA intron (NM_001044719, intron 2 of 4) PB1D7|SINE|Alu 27204 NM_001033279 224647 Mm.196577 NM_001033279 ENSMUSG00000056692 D17Wsu92e AU020189|C030010A15|C80239 DNA segment, Chr 17, Wayne State University 92, expressed protein-coding common_peak2_175_1470_0.0170531449981901_10.5311081037539_0.324815032946794 chr18 35941337 35943531 + 0.324815032946794 NA Intergenic Intergenic -22396 NM_028707 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding common_peak2_77_560_-0.0323011998145759_9.11570636070151_0.324722734173253 chr5 54100151 54102536 + 0.324722734173253 NA intron (NM_001081103, intron 3 of 11) intron (NM_001081103, intron 3 of 11) 102820 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak1_260_2437_-0.0145500638010763_11.2442073787197_0.324709921627487 chr11 67561470 67563279 + 0.324709921627487 NA intron (NM_008088, intron 1 of 13) MER68B|LTR|ERVL -24126 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak2_402_4142_-0.0107729851700675_12.0110736123942_0.324707357807891 chr10 17985981 17990391 + 0.324707357807891 NA Intergenic MER95|LTR|ERV1 35066 NM_028440 73112 Mm.276041 NM_028440 ENSMUSG00000078453 Abracl 1700028I04Rik|3110003A17Rik ABRA C-terminal like protein-coding common_peak1_66_465_-0.0336424445045562_8.847364922402_0.3246334214303 chr14 63193387 63194569 + 0.3246334214303 NA promoter-TSS (NM_201610) promoter-TSS (NM_201610) -453 NM_201610 382913 Mm.239490 NM_201610 ENSMUSG00000035121 Neil2 Gm1212|NEH2 nei like 2 (E. coli) protein-coding common_peak2_28_169_-0.0607276216251336_7.37902712532513_0.324577363921772 chr5 38897849 38899419 + 0.324577363921772 NA Intergenic (TGG)n|Simple_repeat|Simple_repeat -21941 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak1_28_169_-0.0607276216251336_7.37902712532513_0.324577363921772-2 chr4 44981424 44981989 + 0.324577363921772 NA intron (NM_080289, intron 1 of 8) intron (NM_080289, intron 1 of 8) 312 NM_001312880 76238 Mm.196574 NM_080289 ENSMUSG00000035637 Grhpr 1110059D05Rik|6430629L09Rik|Glxr glyoxylate reductase/hydroxypyruvate reductase protein-coding common_peak1_28_169_-0.0607276216251336_7.37902712532513_0.324577363921772 chr11 78094279 78095000 + 0.324577363921772 NA promoter-TSS (NM_145430) promoter-TSS (NM_145430) -34 NM_145430 216971 Mm.119387 NM_145430 ENSMUSG00000037750 Fam222b 9630020I17Rik family with sequence similarity 222, member B protein-coding common_peak2_131_1031_0.0193173146103369_10.0208859127284_0.324553613351206 chr18 76943412 76945098 + 0.324553613351206 NA promoter-TSS (NM_001039201) promoter-TSS (NM_001039201) 140 NM_001039202 76987 Mm.236127 NM_029826 ENSMUSG00000025421 Hdhd2 0610039H12Rik|3110052N05Rik haloacid dehalogenase-like hydrolase domain containing 2 protein-coding common_peak2_161_1328_0.0168290049030606_10.3845398917277_0.324507726939973 chr4 135271026 135273546 + 0.324507726939973 NA intron (NM_013885, intron 1 of 5) CpG 474 NM_013885 29876 Mm.257765 NM_013885 ENSMUSG00000037242 Clic4 D0Jmb3|TU-74|mc3s5|mtCLIC chloride intracellular channel 4 (mitochondrial) protein-coding common_peak1_161_1328_0.0168290049030606_10.3845398917277_0.324507726939973 chr5 72914333 72915505 + 0.324507726939973 NA exon (NM_001113423, exon 1 of 8) exon (NM_001113423, exon 1 of 8) 557 NM_153567 75991 Mm.121285 NM_153567 ENSMUSG00000036087 Slain2 5033405K12Rik|8030444K12Rik|AI596370 SLAIN motif family, member 2 protein-coding common_peak2_79_555_0.0254177772799817_9.1316499613635_0.324469101668955 chr11 8424122 8425942 + 0.324469101668955 NA Intergenic Intergenic 239503 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 protein-coding common_peak1_29_164_0.0423342183518871_7.38748932342176_0.324436346500181 chr6 106794055 106794680 + 0.324436346500181 NA intron (NM_175357, intron 3 of 10) intron (NM_175357, intron 3 of 10) 5720 NM_021449 58799 Mm.290085 NM_021449 ENSMUSG00000005362 Crbn 2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL cereblon protein-coding common_peak2_29_164_0.0423342183518871_7.38748932342176_0.324436346500181 chr14 53795126 53796152 + 0.324436346500181 NA Intergenic Intergenic 458290 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak1_176_1517_-0.0182951542203575_10.5588084983053_0.324357622899028 chr1 37477346 37479559 + 0.324357622899028 NA intron (NM_001290801, intron 4 of 14) intron (NM_001290801, intron 4 of 14) 10153 NR_024017 77633 Mm.483177 NR_024017 ENSMUSG00000103948 4930594C11Rik - G1 to S phase transition pseudogene pseudo unique_peak2_47_294_0.0358166350292475_8.22247946176383_0.324348520449595 chr7 114167975 114169915 + 0.324348520449595 NA Intergenic Intergenic -51164 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak1_430_4496_-0.0101914655207676_12.1296514359086_0.324317454072378 chr2 11215451 11219691 + 0.324317454072378 NA intron (NM_008859, intron 1 of 17) RSINE1|SINE|B4 45189 NM_008859 18761 Mm.329993 NM_008859 ENSMUSG00000026778 Prkcq A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq protein kinase C, theta protein-coding common_peak1_178_1502_0.0159152915064045_10.5615869396696_0.324311306745014 chr1 52816850 52817926 + 0.324311306745014 NA intron (NM_008384, intron 1 of 5) CpG 300 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding common_peak1_14_77_-0.103358097450901_6.2337231701368_0.324195113983386 chr13 21408282 21408750 + 0.324195113983386 NA Intergenic Intergenic -5761 NM_023685 72739 Mm.296071 NM_023685 ENSMUSG00000021327 Zkscan3 2810435N07Rik|AA408594|AI132359|Skz1|Zf47|Zfp-47|Zfp306|Zfp307|mszf35 zinc finger with KRAB and SCAN domains 3 protein-coding unique_peak2_14_77_-0.103358097450901_6.2337231701368_0.324195113983386 chr1 64948875 64949454 + 0.324195113983386 NA intron (NM_001039493, intron 1 of 7) intron (NM_001039493, intron 1 of 7) 7660 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding unique_peak2_14_77_-0.103358097450901_6.2337231701368_0.324195113983386-3 chr9 65537818 65538538 + 0.324195113983386 NA Intergenic Intergenic 41909 NM_153119 102595 Mm.247303 NM_153119 ENSMUSG00000050721 Plekho2 AI840980|Plekhq1 pleckstrin homology domain containing, family O member 2 protein-coding unique_peak2_14_77_-0.103358097450901_6.2337231701368_0.324195113983386-2 chr11 97096286 97096919 + 0.324195113983386 NA Intergenic B4|SINE|B4 18729 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding common_peak1_14_77_-0.103358097450901_6.2337231701368_0.324195113983386-2 chr2 166103265 166103667 + 0.324195113983386 NA intron (NM_001252579, intron 3 of 20) intron (NM_001252579, intron 3 of 20) 51819 NM_001252578 72043 Mm.1011 NM_028072 ENSMUSG00000006800 Sulf2 2010004N24Rik|AU020235|MSulf-2|mKIAA1247 sulfatase 2 protein-coding common_peak1_286_2688_0.0121253344580232_11.3989167071019_0.324192444288694 chr9 65402991 65405788 + 0.324192444288694 NA intron (NM_001033158, intron 2 of 4) intron (NM_001033158, intron 2 of 4) 5901 NM_001033158 70784 Mm.35827 NM_001033158 ENSMUSG00000041696 Rasl12 4631404I11Rik RAS-like, family 12 protein-coding unique_peak2_37_234_-0.049540431981753_7.85174673057412_0.324111608943995 chr11 97813002 97815049 + 0.324111608943995 NA intron (NM_010688, intron 2 of 6) intron (NM_010688, intron 2 of 6) 14353 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak2_38_227_0.0400534354431192_7.8529167318863_0.324111608943995 chr17 26112820 26114227 + 0.324111608943995 NA exon (NM_021793, exon 1 of 13) exon (NM_021793, exon 1 of 13) 207 NM_021793 60455 Mm.304656 NM_021793 ENSMUSG00000024180 Tmem8 AW490096|M83|Tmem8a transmembrane protein 8 (five membrane-spanning domains) protein-coding common_peak1_38_227_0.0400534354431192_7.8529167318863_0.324111608943995 chr7 30308065 30308672 + 0.324111608943995 NA promoter-TSS (NM_198027) promoter-TSS (NM_198027) -385 NM_198027 233065 Mm.276277 NM_198027 ENSMUSG00000042831 Alkbh6 AI839550|Abh6|C130099A02 alkB homolog 6 protein-coding common_peak2_37_234_-0.049540431981753_7.85174673057412_0.324111608943995 chr1 54906648 54908045 + 0.324111608943995 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 19041 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak2_38_227_0.0400534354431192_7.8529167318863_0.324111608943995-2 chr3 52568558 52570065 + 0.324111608943995 NA Intergenic Intergenic -170413 NR_038079 329639 Mm.131245 NR_038079 ENSMUSG00000102785 Gm2447 100039832|A530017F20 predicted gene 2447 ncRNA common_peak1_148_1197_0.0185128093188354_10.2356685974482_0.324096428051914 chr1 171118414 171119771 + 0.324096428051914 NA Intergenic ID_B1|SINE|B4 -2569 NM_001081275 75472 Mm.32760 NM_029301 ENSMUSG00000026649 Cfap126 1700009P17Rik|AV282292|Flattop|Fltp cilia and flagella associated protein 126 protein-coding common_peak2_104_803_-0.0254714605021089_9.63831596092787_0.324067215413069 chr19 45005570 45007395 + 0.324067215413069 NA promoter-TSS (NM_053164) promoter-TSS (NM_053164) -40 NM_053164 94067 Mm.44174 NM_053164 ENSMUSG00000025208 Mrpl43 4930442D21Rik|bMRP36a mitochondrial ribosomal protein L43 protein-coding common_peak2_119_917_0.0195307115566088_9.85211569919211_0.324060983946335 chr11 79992290 79994180 + 0.324060983946335 NA 5' UTR (NM_199196, exon 1 of 16) 5' UTR (NM_199196, exon 1 of 16) 129 NM_199196 52615 Mm.283410 NM_199196 ENSMUSG00000017548 Suz12 2610028O16Rik|AI195385|AU016842|AW536442|D11Ertd530e|mKIAA0160 suppressor of zeste 12 homolog (Drosophila) protein-coding common_peak1_79_577_-0.0305668324971897_9.15964226625208_0.324017941206689 chr2 61711645 61712431 + 0.324017941206689 NA intron (NM_021526, intron 1 of 11) intron (NM_021526, intron 1 of 11) 344 NM_021526 59029 Mm.218198 NM_021526 ENSMUSG00000026914 Psmd14 2610312C03Rik|3200001M20Rik|AA986732|Pad1|Poh1|rpm11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 protein-coding common_peak2_21_121_-0.0709395948689355_6.89526754012842_0.323937522245888 chr7 22774788 22775462 + 0.323937522245888 NA intron (NM_001270494, intron 1 of 1).3 MMVL30-int|LTR|ERV1 13428 NM_001166754 667551 Mm.484969 NM_001166754 ENSMUSG00000095619 Vmn1r157 100043559|EG667551|Gm4517|Gm8699|Vmn1r109 vomeronasal 1 receptor 157 protein-coding common_peak1_21_121_-0.0709395948689355_6.89526754012842_0.323937522245888 chr13 101757023 101757570 + 0.323937522245888 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) 10921 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding unique_peak2_21_121_-0.0709395948689355_6.89526754012842_0.323937522245888 chr13 32975499 32976569 + 0.323937522245888 NA intron (NM_011454, intron 5 of 6) intron (NM_011454, intron 5 of 6) 10521 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak1_21_121_-0.0709395948689355_6.89526754012842_0.323937522245888-3 chr2 26352194 26352571 + 0.323937522245888 NA promoter-TSS (NM_001139504) promoter-TSS (NM_001139504) -272 NM_001139504 52838 Mm.31239 NM_026828 ENSMUSG00000075467 Dnlz 1110034G11Rik|D2Bwg1335e|HEP1 DNL-type zinc finger protein-coding common_peak1_21_121_-0.0709395948689355_6.89526754012842_0.323937522245888-2 chr15 102295522 102296092 + 0.323937522245888 NA promoter-TSS (NM_001014976) promoter-TSS (NM_001014976) -486 NM_001014976 105988 Mm.288324 NM_001014976 ENSMUSG00000058290 Espl1 AL024103|AU045071|Cerp|ESP1|PRCE|SSE extra spindle pole bodies 1, separase protein-coding common_peak1_149_1207_0.018357280150946_10.2475833794006_0.323906578117596 chr1 40479739 40481359 + 0.323906578117596 NA intron (NM_001161843, intron 5 of 9) intron (NM_001161843, intron 5 of 9) 14543 NM_008365 16182 Mm.253664 NM_008365 ENSMUSG00000026070 Il18r1 Il18ralpha|Il1rrp interleukin 18 receptor 1 protein-coding common_peak1_93_678_0.0224756343676429_9.41850558142855_0.323887893120096 chr1 21368413 21369669 + 0.323887893120096 NA exon (NM_001033904, exon 2 of 3) exon (NM_001033904, exon 2 of 3) 710 NM_001033904 433278 Mm.26006 NM_001033904 ENSMUSG00000041722 Khdc1c Khdc1b KH domain containing 1C protein-coding common_peak2_81_572_0.0256642474948769_9.17522345250434_0.323779098149161 chr12 11209350 11211214 + 0.323779098149161 NA Intergenic Intergenic -1334 NM_019544 56184 Mm.117113 NM_019544 ENSMUSG00000047002 Msgn1 Msgn|pMsgn1 mesogenin 1 protein-coding common_peak1_47_310_-0.0403829908521516_8.26057927470453_0.323738850621219 chr14 118705514 118706422 + 0.323738850621219 NA intron (NM_001163676, intron 1 of 29) CpG 251 NM_001163676 239273 Mm.40537 NM_001033336 ENSMUSG00000032849 Abcc4 ABCC4-N1|D630049P08Rik|MOATB|MRP4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein-coding common_peak2_47_310_-0.0403829908521516_8.26057927470453_0.323738850621219 chr4 134163560 134165588 + 0.323738850621219 NA intron (NM_144527, intron 3 of 13) RLTR4_Mm|LTR|ERV1 22511 NM_144527 70012 Mm.26542 NM_144527 ENSMUSG00000037443 Cep85 2410030J07Rik|AI173272|AI173504|Ccdc21 centrosomal protein 85 protein-coding common_peak1_48_302_0.0337022534377329_8.26002511019182_0.32373885062112 chr2 127512657 127513523 + 0.32373885062112 NA intron (NR_110989, intron 1 of 8) intron (NR_110989, intron 1 of 8) 8302 NM_001291005 56461 Mm.315292 NM_019789 ENSMUSG00000079056 Kcnip3 4933407H12Rik|AI413860|Csen|DREAM|KChIP3|R74849 Kv channel interacting protein 3, calsenilin protein-coding common_peak2_48_302_0.0337022534377329_8.26002511019182_0.32373885062112 chr7 126376747 126378407 + 0.32373885062112 NA non-coding (NR_045537, exon 1 of 13) non-coding (NR_045537, exon 1 of 13) 357 NM_023712 73658 Mm.11112 NM_023712 ENSMUSG00000030741 Spns1 2210013K02Rik|Spin1|Spinl spinster homolog 1 protein-coding common_peak2_29_176_-0.0589491174852945_7.43813099134035_0.323624482697677-2 chr11 116616305 116617560 + 0.323624482697677 NA intron (NM_172572, intron 1 of 18) intron (NM_172572, intron 1 of 18) 7320 NM_001167680 217344 Mm.89695 NM_172572 ENSMUSG00000020806 Rhbdf2 4732465I17Rik|Rhbdl6|cub rhomboid 5 homolog 2 protein-coding common_peak1_29_176_-0.0589491174852945_7.43813099134035_0.323624482697677-2 chr6 136470094 136470686 + 0.323624482697677 NA Intergenic Intergenic -48461 NM_019426 54343 Mm.173271 NM_019426 ENSMUSG00000030213 Atf7ip 2610204M12Rik|AM|Mcaf1 activating transcription factor 7 interacting protein protein-coding common_peak1_29_176_-0.0589491174852945_7.43813099134035_0.323624482697677 chr12 4477294 4477925 + 0.323624482697677 NA promoter-TSS (NM_010881) promoter-TSS (NM_010881) -427 NM_010881 17977 Mm.301039 NM_010881 ENSMUSG00000020647 Ncoa1 KAT13A|NCoA-1|NRC-1|SRC-1|SRC-a|SRC1|bHLHe74|mNRC-1 nuclear receptor coactivator 1 protein-coding common_peak2_29_176_-0.0589491174852945_7.43813099134035_0.323624482697677 chr1 172126696 172127398 + 0.323624482697677 NA intron (NM_001159525, intron 1 of 5) intron (NM_001159525, intron 1 of 5) 292 NM_023041 19298 Mm.247764 NM_023041 ENSMUSG00000003464 Pex19 Pxf peroxisomal biogenesis factor 19 protein-coding common_peak2_29_176_-0.0589491174852945_7.43813099134035_0.323624482697677-3 chr4 62455992 62457280 + 0.323624482697677 NA intron (NM_001290521, intron 9 of 10) RMER4A|LTR|ERVK 14259 NM_001290522 71354 Mm.155573 NM_023597 ENSMUSG00000028391 Wdr31 5430402I10Rik|spWD WD repeat domain 31 protein-coding common_peak1_15_75_0.0483257496815828_6.27209038828438_0.323593285424106-3 chr5 122263946 122264400 + 0.323593285424106 NA exon (NM_001039153, exon 1 of 14) exon (NM_001039153, exon 1 of 14) 287 NR_104441 654470 Mm.28804 NM_001039153 ENSMUSG00000038593 Tctn1 G730031O11Rik|Tect1 tectonic family member 1 protein-coding common_peak1_15_75_0.0483257496815828_6.27209038828438_0.323593285424106 chr10 21991204 21991609 + 0.323593285424106 NA promoter-TSS (NM_001161849) promoter-TSS (NM_001161849) -817 NM_001161849 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_15_75_0.0483257496815828_6.27209038828438_0.323593285424106-4 chr6 30230601 30230956 + 0.323593285424106 NA intron (NM_001169576, intron 3 of 4) intron (NM_001169576, intron 3 of 4) 13025 NM_001169577 22214 Mm.332967 NM_009459 ENSMUSG00000039159 Ube2h 1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8 ubiquitin-conjugating enzyme E2H protein-coding common_peak1_15_75_0.0483257496815828_6.27209038828438_0.323593285424106-5 chr7 17024240 17024646 + 0.323593285424106 NA intron (NM_011155, intron 1 of 12) intron (NM_011155, intron 1 of 12) 3471 NM_011155 19060 Mm.3294 NM_011155 ENSMUSG00000003099 Ppp5c AU020526|PP5 protein phosphatase 5, catalytic subunit protein-coding common_peak1_15_75_0.0483257496815828_6.27209038828438_0.323593285424106-2 chr17 17837801 17838245 + 0.323593285424106 NA intron (NM_001162909, intron 6 of 8) intron (NM_001162909, intron 6 of 8) 7048 NM_001162909 75202 Mm.227456 NM_029205 ENSMUSG00000080316 Spaca6 4930546H06Rik|9530079D04Rik|B230206P06Rik|Ncrna00085|SPACA6A|let-7e|mir-125a|mir-99b sperm acrosome associated 6 protein-coding unique_peak2_22_118_0.0436430407855664_6.91663928370073_0.323557259308907 chr4 139220127 139221117 + 0.323557259308907 NA intron (NM_001271405, intron 1 of 8) intron (NM_001271405, intron 1 of 8) 26511 NM_001271405 12345 Mm.2945 NM_009798 ENSMUSG00000028745 Capzb 1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1 capping protein (actin filament) muscle Z-line, beta protein-coding unique_peak2_22_118_0.0436430407855664_6.91663928370073_0.323557259308907-2 chr5 21258435 21259455 + 0.323557259308907 NA intron (NM_175437, intron 19 of 30) intron (NM_175437, intron 19 of 30) 72678 NM_175437 212167 Mm.121705 NM_175437 ENSMUSG00000039934 Gsap A530088I07Rik|Pion gamma-secretase activating protein protein-coding common_peak1_22_118_0.0436430407855664_6.91663928370073_0.323557259308907 chr2 9875276 9875656 + 0.323557259308907 NA intron (NM_008091, intron 2 of 5) intron (NM_008091, intron 2 of 5) 3134 NM_008091 14462 Mm.313866 NM_008091 ENSMUSG00000015619 Gata3 Gata-3|jal GATA binding protein 3 protein-coding common_peak2_22_118_0.0436430407855664_6.91663928370073_0.323557259308907-2 chr13 56522315 56523061 + 0.323557259308907 NA intron (NM_178674, intron 1 of 6) CpG 180 NM_178674 213311 Mm.233904 NM_178674 ENSMUSG00000035509 Fbxl21 D630045D17Rik|FBL3B|FBXL3B|Psttm F-box and leucine-rich repeat protein 21 protein-coding unique_peak2_22_118_0.0436430407855664_6.91663928370073_0.323557259308907-3 chr9 32394100 32395047 + 0.323557259308907 NA intron (NM_001168354, intron 1 of 1) intron (NM_001168354, intron 1 of 1) 588 NM_001168354 56379 Mm.390168 NM_019659 ENSMUSG00000041248 Kcnj1 Kir1.1|ROMK|Romk2 potassium inwardly-rectifying channel, subfamily J, member 1 protein-coding common_peak2_22_118_0.0436430407855664_6.91663928370073_0.323557259308907 chr11 75509916 75510742 + 0.323557259308907 NA TTS (NM_138659) TTS (NM_138659) 235 NM_001029938 280408 Mm.41416 NM_001029938 ENSMUSG00000038195 Rilp AI835553|Gm857 Rab interacting lysosomal protein protein-coding common_peak1_165_1402_-0.0181811132651948_10.4452087369873_0.323547377005748 chr10 61281362 61282911 + 0.323547377005748 NA Intergenic B3|SINE|B2 -8698 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak1_30_171_0.0404174500322085_7.4464734797182_0.323494616417343 chr10 61303767 61304379 + 0.323494616417343 NA 3' UTR (NM_011073, exon 3 of 3) 3' UTR (NM_011073, exon 3 of 3) 6237 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak2_38_241_-0.0459197876667341_7.89590334344123_0.323431258760088 chr10 78168932 78169837 + 0.323431258760088 NA exon (NM_138601, exon 2 of 7) exon (NM_138601, exon 2 of 7) 384 NM_138601 28295 Mm.268691 NM_138601 ENSMUSG00000053329 D10Jhu81e C21orf33|ES1 DNA segment, Chr 10, Johns Hopkins University 81 expressed protein-coding common_peak1_38_241_-0.0459197876667341_7.89590334344123_0.323431258760088 chr7 67222522 67223288 + 0.323431258760088 NA promoter-TSS (NR_131044) promoter-TSS (NR_131044) 289 NM_001191051 75099 Mm.121691 NM_175215 ENSMUSG00000043831 Lysmd4 4930506D23Rik LysM, putative peptidoglycan-binding, domain containing 4 protein-coding common_peak2_81_594_-0.0286902819435237_9.20240071722354_0.323353868781225 chr5 137627785 137628895 + 0.323353868781225 NA promoter-TSS (NM_001168652) promoter-TSS (NM_001168652) -783 NM_146164 231798 Mm.200763 NM_146164 ENSMUSG00000029720 Lrch4 2810008P14Rik|2900069C24Rik|AI558103|LRN|LRRN4|SAP25|mFLJ00248 leucine-rich repeats and calponin homology (CH) domain containing 4 protein-coding common_peak1_39_235_0.0351034894552908_7.90019479408949_0.323337326370864 chr8 105851399 105852099 + 0.323337326370864 NA intron (NM_177150, intron 1 of 12) intron (NM_177150, intron 1 of 12) 259 NM_177150 320394 Mm.334775 NM_177150 ENSMUSG00000036672 Cenpt G630055P03Rik centromere protein T protein-coding common_peak1_107_831_-0.0250075289287857_9.6879359536767_0.323284855495944 chr1 180372621 180374061 + 0.323284855495944 NA intron (NM_001081175, intron 2 of 7) MTC|LTR|ERVL-MaLR -42792 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak2_167_1423_-0.0184218536088316_10.466522504162_0.32321307460646 chrX 107148814 107152634 + 0.32321307460646 NA intron (NM_175442, intron 1 of 1) intron (NM_175442, intron 1 of 1) 1109 NM_175442 213438 Mm.265244 NM_175442 ENSMUSG00000054293 A630033H20Rik AI662791|P2ry10 RIKEN cDNA A630033H20 gene protein-coding common_peak2_48_318_-0.0405363768541847_8.29714442533778_0.323160249359235 chr12 40445077 40446036 + 0.323160249359235 NA promoter-TSS (NM_172803) promoter-TSS (NM_172803) 234 NM_172575 246196 Mm.26852 NM_172575 ENSMUSG00000055917 Zfp277 2410017E24Rik|NIRF4 zinc finger protein 277 protein-coding common_peak2_48_318_-0.0405363768541847_8.29714442533778_0.323160249359235-2 chr4 53439793 53441236 + 0.323160249359235 NA 5' UTR (NM_133891, exon 1 of 16) 5' UTR (NM_133891, exon 1 of 16) 101 NM_133891 100434 Mm.482207 NM_133891 ENSMUSG00000028412 Slc44a1 2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92 solute carrier family 44, member 1 protein-coding common_peak2_49_310_0.0318567331921376_8.29669913672667_0.323160249359136 chrX 113184775 113185677 + 0.323160249359136 NA intron (NM_018818, intron 1 of 14) intron (NM_018818, intron 1 of 14) 289 NM_018818 12662 Mm.257316 NM_018818 ENSMUSG00000025531 Chm Rep-1 choroidermia (RAB escort protein 1) protein-coding common_peak1_71_487_0.0271726466824926_8.94432366090413_0.323098184574377 chr2 167147790 167148810 + 0.323098184574377 NA intron (NM_008420, intron 1 of 1) intron (NM_008420, intron 1 of 1) 40518 NM_008420 16500 Mm.205341 NM_008420 ENSMUSG00000050556 Kcnb1 Kcr1-1|Kv2.1|Shab potassium voltage gated channel, Shab-related subfamily, member 1 protein-coding common_peak1_316_3088_-0.012009197368787_11.5869195569432_0.323094277773337 chr11 90223908 90226411 + 0.323094277773337 NA Intergenic Intergenic -24317 NM_026178 67468 Mm.277518 NM_026178 ENSMUSG00000003948 Mmd 1200017E07Rik|1810073C06Rik|AA690185 monocyte to macrophage differentiation-associated protein-coding common_peak2_70_499_-0.0326247388150698_8.94947191525455_0.323008836622542 chr2 181863640 181865295 + 0.323008836622542 NA exon (NM_025901, exon 1 of 3) exon (NM_025901, exon 1 of 3) 107 NM_025901 67005 Mm.271986 NM_025901 ENSMUSG00000038628 Polr3k 12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11 polymerase (RNA) III (DNA directed) polypeptide K protein-coding common_peak1_60_397_0.0278948305033229_8.65057203579531_0.322934472357728 chr15 36647850 36648775 + 0.322934472357728 NA Intergenic Intergenic -39339 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak2_153_1280_-0.0197209083822241_10.3131943061505_0.322881434409327 chr15 83554812 83556515 + 0.322881434409327 NA promoter-TSS (NM_001030014) promoter-TSS (NM_001030014) 48 NM_001030014 223722 Mm.37560 NM_001030014 ENSMUSG00000048755 Mcat AI225907|BC025519 malonyl CoA:ACP acyltransferase (mitochondrial) protein-coding common_peak1_59_407_-0.0371565981874351_8.65384704287778_0.322880049026655 chr7 39654598 39655305 + 0.322880049026655 NA Intergenic Lx4A|LINE|L1 137185 NM_001004139 70227 Mm.333800 NM_001004139 ENSMUSG00000068959 Zfp619 3000002G13Rik zinc finger protein 619 protein-coding common_peak1_84_599_0.0228231573566102_9.24023026917419_0.322762980509838 chr17 34118084 34119289 + 0.322762980509838 NA non-coding (NR_037970, exon 1 of 13) non-coding (NR_037970, exon 1 of 13) 1214 NR_037970 14312 Mm.3444 NM_010238 ENSMUSG00000024335 Brd2 AW228947|D17H6S113E|Frg-1|Fsrg-1|Fsrg1|Nat|Ring3|Rnf3|mKIAA4005 bromodomain containing 2 protein-coding common_peak1_30_183_-0.0568797513227066_7.49512208039566_0.322745725182235-3 chr17 81064743 81065096 + 0.322745725182235 NA intron (NM_028138, intron 1 of 9) CpG 166 NM_028138 72167 Mm.273257 NM_028138 ENSMUSG00000024246 Thumpd2 2810025A12Rik THUMP domain containing 2 protein-coding common_peak1_30_183_-0.0568797513227066_7.49512208039566_0.322745725182235 chr10 8195858 8196513 + 0.322745725182235 NA Intergenic Intergenic -240062 NM_138667 68652 Mm.193041 NM_138667 ENSMUSG00000015755 Tab2 1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding common_peak1_30_183_-0.0568797513227066_7.49512208039566_0.322745725182235-2 chr12 80433014 80433837 + 0.322745725182235 NA intron (NM_177267, intron 1 of 8) intron (NM_177267, intron 1 of 8) 3176 NM_177267 320808 Mm.220310 NM_177267 ENSMUSG00000049106 Dcaf5 9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22 DDB1 and CUL4 associated factor 5 protein-coding unique_peak2_30_183_-0.0568797513227066_7.49512208039566_0.322745725182235 chrX 56609261 56610404 + 0.322745725182235 NA promoter-TSS (NM_172780) promoter-TSS (NM_172780) -3 NM_172780 236794 Mm.17815 NM_172780 ENSMUSG00000060681 Slc9a6 3732426M05|6430520C02Rik|NHE6|mKIAA0267 solute carrier family 9 (sodium/hydrogen exchanger), member 6 protein-coding common_peak2_222_2010_-0.0152134923509486_10.9660906201299_0.322744810238728 chr9 95856936 95859161 + 0.322744810238728 NA promoter-TSS (NM_001271569) promoter-TSS (NM_001271569) -166 NM_001271569 73410 Mm.443314 NM_028533 ENSMUSG00000096655 1700065D16Rik - RIKEN cDNA 1700065D16 gene protein-coding common_peak1_140_1119_0.0179825866343357_10.1382743102621_0.32271596555678 chr11 77800856 77803268 + 0.32271596555678 NA intron (NM_001291214, intron 1 of 38) intron (NM_001291214, intron 1 of 38) 764 NM_001291215 360013 Mm.341248 NM_011586 ENSMUSG00000000631 Myo18a MAJN|MyoPDZ|MysPDZ|SP-R210 myosin XVIIIA protein-coding unique_peak2_40_242_0.0366307614596444_7.9431278843356_0.322701228403875 chr11 43387346 43388874 + 0.322701228403875 NA Intergenic Intergenic -13649 NR_029558 387164 NR_029558 ENSMUSG00000065601 Mir146 Mirn146|miR-146a|mmu-mir-146 microRNA 146 ncRNA common_peak2_189_1617_0.0150862090315904_10.6675389969458_0.322664702096673 chr12 76764816 76766621 + 0.322664702096673 NA intron (NM_206534, intron 1 of 3) intron (NM_206534, intron 1 of 3) 145 NM_206534 211151 Mm.80970 NM_206534 ENSMUSG00000090258 Churc1 1700030P15Rik|My015|chch churchill domain containing 1 protein-coding unique_peak2_22_128_-0.0727664513297439_6.97484402975838_0.322659637555749 chr17 50524560 50525668 + 0.322659637555749 NA intron (NM_013880, intron 1 of 5) Charlie24|DNA|hAT-Charlie 15567 NM_013880 224860 Mm.217362 NM_013880 ENSMUSG00000038910 Plcl2 PLC-L2|PRIP-2|Plce2|mKIAA1092 phospholipase C-like 2 protein-coding common_peak1_22_128_-0.0727664513297439_6.97484402975838_0.322659637555749 chr13 98832483 98832953 + 0.322659637555749 NA Intergenic B1_Mur2|SINE|Alu -17269 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding unique_peak2_22_128_-0.0727664513297439_6.97484402975838_0.322659637555749-2 chr19 11357997 11359334 + 0.322659637555749 NA Intergenic Intergenic -16823 NM_001310331 666907 NM_001310331 ENSMUSG00000101389 Ms4a4a EG666907 membrane-spanning 4-domains, subfamily A, member 4A protein-coding common_peak1_31_178_0.0390497970472676_7.50334067578789_0.322625737757008-2 chr9 85747852 85748472 + 0.322625737757008 NA intron (NM_001081282, intron 1 of 28) intron (NM_001081282, intron 1 of 28) 1172 NM_001081282 108837 Mm.22315 NM_175371 ENSMUSG00000035941 Ibtk 5430411K16Rik|AA409502|BTKI|mKIAA1417 inhibitor of Bruton agammaglobulinemia tyrosine kinase protein-coding common_peak1_31_178_0.0390497970472676_7.50334067578789_0.322625737757008 chr3 10350711 10351346 + 0.322625737757008 NA intron (NM_025512, intron 1 of 7) intron (NM_025512, intron 1 of 7) 273 NM_025512 66361 Mm.371617 NM_025512 ENSMUSG00000039795 Zfand1 2310008M20Rik|AW048890 zinc finger, AN1-type domain 1 protein-coding common_peak1_50_318_0.0302581633625874_8.33254169544616_0.322610400746698-2 chr15 80216468 80217262 + 0.322610400746698 NA Intergenic Intergenic -17215 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak1_50_318_0.0302581633625874_8.33254169544616_0.322610400746698 chr13 24637625 24638302 + 0.322610400746698 NA promoter-TSS (NM_029679) promoter-TSS (NM_029679) -685 NM_001080381 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak2_188_1642_-0.0163730888450075_10.6739302205276_0.322571962059868 chr5 105699125 105701699 + 0.322571962059868 NA promoter-TSS (NM_178701) promoter-TSS (NM_178701) -398 NM_178701 231549 Mm.23837 NM_178701 ENSMUSG00000046079 Lrrc8d 2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5 leucine rich repeat containing 8D protein-coding common_peak2_141_1129_0.0176647997308237_10.150939457168_0.322525149137272 chr1 172375758 172377622 + 0.322525149137272 NA 5' UTR (NM_026234, exon 1 of 1) 5' UTR (NM_026234, exon 1 of 1) 159 NM_026234 67556 Mm.26612 NM_026234 ENSMUSG00000050229 Pigm 4933437L05Rik|AI644422|AV302080|C920011G20Rik phosphatidylinositol glycan anchor biosynthesis, class M protein-coding common_peak1_23_124_0.0479911834300077_6.98977987637709_0.322488629889589-2 chr7 97069016 97069590 + 0.322488629889589 NA Intergenic ID_B1|SINE|B4 -12448 NM_001162477 14389 Mm.42033 NM_010248 ENSMUSG00000004508 Gab2 AI463667|D130058I17Rik|p97 growth factor receptor bound protein 2-associated protein 2 protein-coding common_peak1_23_124_0.0479911834300077_6.98977987637709_0.322488629889589 chr2 79005699 79006252 + 0.322488629889589 NA Intergenic Intergenic 136928 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak2_23_124_0.0479911834300077_6.98977987637709_0.322488629889589 chr13 32907776 32908895 + 0.322488629889589 NA Intergenic L1_Mur3|LINE|L1 -10195 NM_173051 380839 Mm.250802 NM_173051 ENSMUSG00000079049 Serpinb1c EIC|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 1c protein-coding unique_peak2_23_124_0.0479911834300077_6.98977987637709_0.322488629889589-2 chr8 105685697 105686717 + 0.322488629889589 NA Intergenic Intergenic -4699 NM_001033320 234695 Mm.471640 NM_001033320 ENSMUSG00000050357 Carmil2 CG1399-PB|D130029J02Rik|Gm585|Rltpr capping protein regulator and myosin 1 linker 2 protein-coding unique_peak2_23_124_0.0479911834300077_6.98977987637709_0.322488629889589 chr13 117048569 117049451 + 0.322488629889589 NA Intergenic Intergenic -23494 NM_001081009 52552 Mm.274466 NM_027272 ENSMUSG00000021725 Parp8 2810430O08Rik|ARTD16|D13Ertd275e poly (ADP-ribose) polymerase family, member 8 protein-coding common_peak1_15_83_-0.0960641596535927_6.34428534295196_0.322478816481785-2 chr3 103386464 103386859 + 0.322478816481785 NA Intergenic Intergenic 107368 NM_001079830 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding unique_peak2_15_83_-0.0960641596535927_6.34428534295196_0.322478816481785 chr10 75954108 75954735 + 0.322478816481785 NA promoter-TSS (NM_198635) promoter-TSS (NM_198635) -93 NM_198635 333669 Mm.31077 NM_198635 ENSMUSG00000033255 Gm5134 EG333669 predicted gene 5134 protein-coding unique_peak2_15_83_-0.0960641596535927_6.34428534295196_0.322478816481785-2 chr2 59049966 59050826 + 0.322478816481785 NA Intergenic Intergenic -31790 NM_001001178 227933 Mm.330234 NM_177650 ENSMUSG00000036641 Ccdc148 5830402J09 coiled-coil domain containing 148 protein-coding common_peak1_15_83_-0.0960641596535927_6.34428534295196_0.322478816481785 chr19 9939122 9939447 + 0.322478816481785 NA Intergenic Intergenic -39751 NM_016692 16319 Mm.29755 NM_016692 ENSMUSG00000024660 Incenp 2700067E22Rik|AU019509|C130081E20|C77457 inner centromere protein protein-coding common_peak2_245_2224_0.0126004716639443_11.1258898565731_0.322458119556623 chr10 39475973 39481058 + 0.322458119556623 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 108716 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak2_245_2224_0.0126004716639443_11.1258898565731_0.322458119556623-2 chr2 70824263 70826766 + 0.322458119556623 NA promoter-TSS (NM_172664) promoter-TSS (NM_172664) -34 NM_172664 228012 Mm.136511 NM_172664 ENSMUSG00000041997 Tlk1 4930545J15Rik tousled-like kinase 1 protein-coding common_peak2_60_415_-0.0359202670941201_8.68247958459403_0.322454208590775 chr11 106998572 107000067 + 0.322454208590775 NA intron (NM_010655, intron 1 of 10) CpG 206 NM_010655 16647 Mm.12508 NM_010655 ENSMUSG00000018362 Kpna2 2410044B12Rik|IPOA1|PTAC58|Rch1 karyopherin (importin) alpha 2 protein-coding common_peak1_60_415_-0.0359202670941201_8.68247958459403_0.322454208590775 chr12 76837382 76838261 + 0.322454208590775 NA intron (NM_145927, intron 1 of 11) CpG 354 NM_145927 110606 Mm.151174 NM_145927 ENSMUSG00000033373 Fntb 2010013E13Rik|AA409500 farnesyltransferase, CAAX box, beta protein-coding common_peak1_125_1002_-0.0218844194740431_9.95916368087516_0.322417538535347 chr16 21793789 21795125 + 0.322417538535347 NA intron (NR_037957, intron 1 of 4) CpG 110 NR_037957 100043489 Mm.326535 NR_037957 ENSMUSG00000097290 1300002E11Rik 1500026P21Rik RIKEN cDNA 1300002E11 gene ncRNA common_peak1_191_1638_0.0150122625517053_10.6861062703753_0.32238884697495 chr12 102355158 102357316 + 0.32238884697495 NA intron (NM_001161365, intron 4 of 9) intron (NM_001161365, intron 4 of 9) 72596 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_73_504_0.026256384758609_8.99326777001846_0.322361108960066 chrX 8089741 8090984 + 0.322361108960066 NA exon (NM_009515, exon 1 of 12) exon (NM_009515, exon 1 of 12) 129 NM_009515 22376 Mm.4735 NM_009515 ENSMUSG00000031165 Was U42471|Wasp Wiskott-Aldrich syndrome protein-coding common_peak1_142_1139_0.0173722375303225_10.1635042278173_0.32233766146731 chr18 79077191 79079393 + 0.32233766146731 NA intron (NM_053099, intron 2 of 5) intron (NM_053099, intron 2 of 5) 31099 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_173_1485_-0.0178082586863866_10.5283142711954_0.32228157008659 chr17 94749221 94750744 + 0.32228157008659 NA promoter-TSS (NM_176917) promoter-TSS (NM_176917) -90 NM_176917 76781 Mm.139146 NM_176917 ENSMUSG00000055660 Mettl4 2410198H06Rik|A730091E08Rik|AV296509|HsT661 methyltransferase like 4 protein-coding common_peak1_72_516_-0.0317014439293057_8.99816974835028_0.322277618567071 chr5 3893247 3894161 + 0.322277618567071 NA intron (NM_172135, intron 1 of 1) intron (NM_172135, intron 1 of 1) 229 NM_001013023 545725 Mm.99593 NM_172135 ENSMUSG00000040429 Mterf1a 4931431L11Rik|9230106K09Rik|Mterf|Mterf1|mTERF1b mitochondrial transcription termination factor 1a protein-coding common_peak2_157_1320_-0.018703348947156_10.3580630767733_0.322215223622311 chr4 94602292 94604184 + 0.322215223622311 NA promoter-TSS (NM_172695) promoter-TSS (NM_172695) 9 NM_172695 18786 Mm.490101 NM_172695 ENSMUSG00000028577 Plaa 2410007N06|AI536418|AU018445|AW208417|D4Ertd618e|PLA2P|PLAP|Ufd3 phospholipase A2, activating protein protein-coding common_peak1_98_747_-0.025439996073473_9.5341744618509_0.322129553285939 chr2 3513017 3513814 + 0.322129553285939 NA promoter-TSS (NM_015765) promoter-TSS (NM_015765) 350 NM_177647 227526 Mm.211455 NM_177647 ENSMUSG00000039496 Cdnf 9330140G23|Armetl1 cerebral dopamine neurotrophic factor protein-coding common_peak2_397_4022_0.00953808240814524_11.9788250638297_0.322120652047687 chr11 88067111 88071071 + 0.322120652047687 NA intron (NM_016686, intron 1 of 5) CpG 812 NM_016686 22344 Mm.46628 NM_016686 ENSMUSG00000018377 Vezf1 AI848691|AW046909|db1 vascular endothelial zinc finger 1 protein-coding common_peak1_40_256_-0.0441812841284532_7.98353390712965_0.322100402722133 chr19 40684565 40685207 + 0.322100402722133 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 25116 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak1_40_256_-0.0441812841284532_7.98353390712965_0.322100402722133-2 chr6 22358893 22359759 + 0.322100402722133 NA Intergenic Intergenic -3245 NM_138587 27999 Mm.490307 NM_138587 ENSMUSG00000029672 Fam3c D6Wsu176e|Ilei family with sequence similarity 3, member C protein-coding common_peak2_62_413_0.0281222024524581_8.70754805872555_0.322094986200746 chr10 45000133 45001941 + 0.322094986200746 NA Intergenic Intergenic -66177 NM_011156 19072 Mm.10281 NM_011156 ENSMUSG00000019849 Prep AI047692|AI450383|D10Wsu136e|PEP|Pop prolyl endopeptidase protein-coding common_peak1_62_413_0.0281222024524581_8.70754805872555_0.322094986200746 chr17 24936202 24936969 + 0.322094986200746 NA exon (NM_013931, exon 1 of 32) exon (NM_013931, exon 1 of 32) 392 NM_001163448 30957 Mm.43081 NM_013931 ENSMUSG00000024163 Mapk8ip3 BB120594|D17Wsu15e|JIP-3|JSAP1|JSAP1a|JSAP1b|JSAP1c|JSAP1d|Jip3|Syd2|mKIAA1066 mitogen-activated protein kinase 8 interacting protein 3 protein-coding common_peak2_50_334_-0.040346508217679_8.3678440312363_0.322087213468894 chr5 24383615 24385239 + 0.322087213468894 NA TTS (NM_008713) TTS (NM_008713) 7716 NM_001002897 213948 Mm.332252 NM_001002897 ENSMUSG00000038295 Atg9b Apg912|Apg9l2|Apgdc2|Gm574|Nos3as|eONE|sONE autophagy related 9B protein-coding common_peak1_50_334_-0.040346508217679_8.3678440312363_0.322087213468894 chr8 34153883 34154528 + 0.322087213468894 NA promoter-TSS (NM_026432) promoter-TSS (NM_026432) -358 NM_026432 67887 Mm.290353 NM_026432 ENSMUSG00000031532 Saraf 1810045K07Rik|Tmem66 store-operated calcium entry-associated regulatory factor protein-coding common_peak2_51_326_0.0288867303292051_8.36759019066269_0.322087213468795 chr2 26639477 26640382 + 0.322087213468795 NA promoter-TSS (NR_028571) promoter-TSS (NR_028571) 315 NR_024068 72091 Mm.27103 NR_024068 Snhg7 2610002F03Rik|AI427062 small nucleolar RNA host gene 7 ncRNA common_peak1_61_423_-0.0346259386425363_8.71060748524193_0.3220446497526 chr19 4878676 4879170 + 0.3220446497526 NA exon (NM_027476, exon 1 of 3) exon (NM_027476, exon 1 of 3) 233 NM_001168517 70605 Mm.36885 NM_027476 ENSMUSG00000006463 Zdhhc24 5730496N17Rik|Leng4 zinc finger, DHHC domain containing 24 protein-coding common_peak1_41_250_0.0325434010340828_7.98781525446781_0.322017279453153 chr11 58847159 58847838 + 0.322017279453153 NA Intergenic Intergenic 6382 NM_146537 258530 Mm.377556 NM_146537 ENSMUSG00000094805 Olfr311 MOR222-1 olfactory receptor 311 protein-coding common_peak2_41_250_0.0325434010340828_7.98781525446781_0.322017279453153 chr15 98880685 98882103 + 0.322017279453153 NA promoter-TSS (NM_026967) promoter-TSS (NM_026967) 20 NM_026967 69159 Mm.259708 NM_026967 ENSMUSG00000023755 Rhebl1 1810036J22Rik|Rheb2 Ras homolog enriched in brain like 1 protein-coding common_peak2_74_513_0.0245251590957878_9.01788712874177_0.321990479548792 chr4 49520421 49521857 + 0.321990479548792 NA promoter-TSS (NM_001289901) promoter-TSS (NM_001289901) -37 NM_145547 230162 Mm.186994 NM_145547 ENSMUSG00000039634 Zfp189 BB131811|C430015I23Rik zinc finger protein 189 protein-coding common_peak1_16_81_0.0459842563560882_6.38054413279613_0.321961876121209 chr10 7470371 7470781 + 0.321961876121209 NA intron (NM_029975, intron 1 of 5) L1_Mur3|LINE|L1 2901 NM_029975 77777 Mm.442442 NM_029975 ENSMUSG00000079685 Ulbp1 A430108B07Rik|MULT1 UL16 binding protein 1 protein-coding common_peak1_16_81_0.0459842563560882_6.38054413279613_0.321961876121209-4 chr14 60725941 60726339 + 0.321961876121209 NA intron (NM_001033272, intron 4 of 12) intron (NM_001033272, intron 4 of 12) -6764 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak1_16_81_0.0459842563560882_6.38054413279613_0.321961876121209-6 chr7 63919023 63919454 + 0.321961876121209 NA intron (NM_001256311, intron 1 of 2) intron (NM_001256311, intron 1 of 2) 2381 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak1_16_81_0.0459842563560882_6.38054413279613_0.321961876121209-3 chr12 65065540 65065915 + 0.321961876121209 NA intron (NM_013902, intron 5 of 6) intron (NM_013902, intron 5 of 6) 8211 NM_013902 30795 Mm.28480 NM_013902 ENSMUSG00000020949 Fkbp3 25kDa|FKBP-3|FKBP25 FK506 binding protein 3 protein-coding unique_peak2_16_81_0.0459842563560882_6.38054413279613_0.321961876121209-3 chr3 28402560 28403203 + 0.321961876121209 NA intron (NM_001163007, intron 2 of 31) intron (NM_001163007, intron 2 of 31) -17062 NR_130342 100628591 NR_130342 ENSMUSG00000092990 Mir466q Mir446q|mmu-mir-466q|mu-mir-446q microRNA 466q ncRNA unique_peak2_16_81_0.0459842563560882_6.38054413279613_0.321961876121209 chr1 87847443 87848136 + 0.321961876121209 NA Intergenic RSINE1|SINE|B4 -5498 NM_177646 227333 Mm.277217 NM_177646 ENSMUSG00000070738 Dgkd AI841987|D330025K09|DGKdelta|dgkd-2 diacylglycerol kinase, delta protein-coding common_peak1_16_81_0.0459842563560882_6.38054413279613_0.321961876121209-2 chr11 46447588 46448084 + 0.321961876121209 NA intron (NR_105955, intron 2 of 4) B1F|SINE|Alu -7095 NM_134250 171285 Mm.72168 NM_134250 ENSMUSG00000020399 Havcr2 TIM-3|Tim3|Timd3 hepatitis A virus cellular receptor 2 protein-coding common_peak1_16_81_0.0459842563560882_6.38054413279613_0.321961876121209-5 chr19 57104571 57104952 + 0.321961876121209 NA intron (NM_001290813, intron 6 of 20) intron (NM_001290813, intron 6 of 20) 14263 NM_001103178 226251 Mm.217161 NM_178688 ENSMUSG00000025085 Ablim1 2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059 actin-binding LIM protein 1 protein-coding common_peak2_16_81_0.0459842563560882_6.38054413279613_0.321961876121209 chr5 120907203 120907801 + 0.321961876121209 NA promoter-TSS (NM_145211) promoter-TSS (NM_145211) 23 NM_145211 246730 Mm.14301 NM_145211 ENSMUSG00000052776 Oas1a L3 2'-5' oligoadenylate synthetase 1A protein-coding unique_peak2_16_81_0.0459842563560882_6.38054413279613_0.321961876121209-2 chr1 92647827 92648533 + 0.321961876121209 NA intron (NM_153114, intron 1 of 4) intron (NM_153114, intron 1 of 4) 661 NM_153114 260301 Mm.219545 NM_153114 ENSMUSG00000044055 Otos OTOSP otospiralin protein-coding unique_peak2_31_190_-0.0545632537242247_7.55014720117364_0.321932765805488 chr16 4673598 4675149 + 0.321932765805488 NA intron (NM_030205, intron 3 of 27) intron (NM_030205, intron 3 of 27) 5347 NM_030205 78885 Mm.325512 NM_030205 ENSMUSG00000039637 Coro7 0610011B16Rik|AW048373|AW556392 coronin 7 protein-coding common_peak2_99_756_-0.0249096754766374_9.55169465224741_0.32187635315944 chrX 75060060 75063696 + 0.32187635315944 NA intron (NM_181584, intron 1 of 9) MLT1N2|LTR|ERVL-MaLR 23027 NM_181584 210710 Mm.267056 NM_181584 ENSMUSG00000032750 Gab3 5930433H21Rik growth factor receptor bound protein 2-associated protein 3 protein-coding common_peak2_32_185_0.0381611365528487_7.55823937938445_0.321821571393902 chr3 103206137 103207384 + 0.321821571393902 NA Intergenic Intergenic 35049 NM_026602 68183 Mm.104919 NM_026602 ENSMUSG00000005687 Bcas2 6430539P16Rik|AI132645|C76366|C80030 breast carcinoma amplified sequence 2 protein-coding common_peak1_32_185_0.0381611365528487_7.55823937938445_0.321821571393902 chr15 78530572 78531315 + 0.321821571393902 NA Intergenic Intergenic -1292 NM_028331 72709 Mm.34776 NM_028331 ENSMUSG00000022440 C1qtnf6 2810036M19Rik|CTRP6 C1q and tumor necrosis factor related protein 6 protein-coding common_peak1_270_2549_-0.0128139983988138_11.3098745325468_0.321735195363023 chr2 156862011 156864409 + 0.321735195363023 NA promoter-TSS (NM_026124) promoter-TSS (NM_026124) 88 NM_026124 67388 Mm.29264 NM_026124 ENSMUSG00000027637 1110008F13Rik AI316789 RIKEN cDNA 1110008F13 gene protein-coding common_peak1_63_421_0.0283786967906945_8.73528853710253_0.321698919766101 chr1 71099945 71100919 + 0.321698919766101 NA intron (NM_007525, intron 1 of 10) ID_B1|SINE|B4 2540 NM_007525 12021 Mm.10764 NM_007525 ENSMUSG00000026196 Bard1 ENSMUSG00000060893|ENSMUSG00000073653 BRCA1 associated RING domain 1 protein-coding common_peak1_23_134_-0.0630401289587361_7.04529553257146_0.321672611971975 chr9 26999615 27000254 + 0.321672611971975 NA promoter-TSS (NM_025862) promoter-TSS (NM_025862) 257 NM_144543 77862 Mm.16925 NM_144543 ENSMUSG00000035443 Thyn1 D730042P09Rik|HSPC144|MDS012|MY105|Thy28 thymocyte nuclear protein 1 protein-coding common_peak1_162_1339_0.0158271585762346_10.3959308646333_0.321664747145585 chr2 150666726 150668801 + 0.321664747145585 NA non-coding (NR_040331, exon 1 of 2) non-coding (NR_040331, exon 1 of 2) 269 NR_040331 109344 Mm.440012 NR_040331 ENSMUSG00000087406 E130215H24Rik - RIKEN cDNA E130215H24 gene ncRNA common_peak1_62_431_-0.0332783422116858_8.73824833105763_0.321650456244352 chr5 140331475 140332455 + 0.321650456244352 NA promoter-TSS (NM_008637) promoter-TSS (NM_008637) 43 NM_008637 17766 Mm.118846 NM_008637 ENSMUSG00000036639 Nudt1 Mth1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 protein-coding common_peak1_273_2540_0.0117692076678626_11.3170652638873_0.321629680163204 chr17 47922960 47925335 + 0.321629680163204 NA intron (NM_001110824, intron 1 of 16) CpG 485 NM_028767 74123 Mm.240062 NM_028767 ENSMUSG00000023991 Foxp4 1200010K03Rik|2310007G05Rik|mFKHLA forkhead box P4 protein-coding common_peak2_146_1179_0.016439608814764_10.2127909486566_0.321619314917443 chr1 191905788 191907804 + 0.321619314917443 NA promoter-TSS (NM_009579) promoter-TSS (NM_009579) 15 NM_009579 22782 Mm.9024 NM_009579 ENSMUSG00000037434 Slc30a1 AI839647|C130040I11Rik|Znt1 solute carrier family 30 (zinc transporter), member 1 protein-coding common_peak2_51_342_-0.0400312103455249_8.40204916100005_0.321588794230113 chr9 56551738 56553170 + 0.321588794230113 NA Intergenic Intergenic 83194 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding common_peak2_87_647_-0.026827637817961_9.32643618397564_0.321509448559376 chr8 105859714 105861402 + 0.321509448559376 NA promoter-TSS (NR_033574) promoter-TSS (NR_033574) -76 NM_026532 68051 Mm.455474 NM_026532 ENSMUSG00000008450 Nutf2 2700067I02Rik|AI115459|AI413596|AW546000|Ntf2|Ntf3|PP15 nuclear transport factor 2 protein-coding common_peak1_42_257_0.0344999148306968_8.0284772128386_0.32145328732412 chr9 41950740 41951285 + 0.32145328732412 NA Intergenic Intergenic 173277 NM_011436 20660 Mm.121920 NM_011436 ENSMUSG00000049313 Sorl1 2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA sortilin-related receptor, LDLR class A repeats-containing protein-coding common_peak1_102_760_0.0197952402731936_9.58165026364014_0.321440911105026 chr11 106416750 106417800 + 0.321440911105026 NA intron (NM_023913, intron 10 of 21) intron (NM_023913, intron 10 of 21) -34634 NM_010494 15896 Mm.394 NM_010494 ENSMUSG00000001029 Icam2 CD102|Icam-2|Ly-60 intercellular adhesion molecule 2 protein-coding common_peak2_179_1547_-0.0167864962070663_10.5877965080409_0.321425144150763 chr18 62547842 62549625 + 0.321425144150763 NA promoter-TSS (NM_134136) promoter-TSS (NM_134136) 10 NM_134136 107035 Mm.21295 NM_134136 ENSMUSG00000042211 Fbxo38 6030410I24Rik|AU044865|AW214031|Moka|SP329 F-box protein 38 protein-coding common_peak1_24_131_0.0416210727779305_7.06520465574742_0.321363322860016 chr10 39467589 39468116 + 0.321363322860016 NA intron (NM_008054, intron 3 of 13) intron (NM_008054, intron 3 of 13) 98053 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_24_131_0.0416210727779305_7.06520465574742_0.321363322860016-2 chr11 59397465 59398053 + 0.321363322860016 NA Intergenic Intergenic -22106 NM_001045521 216797 Mm.339586 NM_001045521 ENSMUSG00000049291 Prss38 Gm249|Mpn2 protease, serine 38 protein-coding common_peak1_24_131_0.0416210727779305_7.06520465574742_0.321363322860016-3 chr5 148774869 148775374 + 0.321363322860016 NA Intergenic Intergenic -2842 NR_131106 78015 Mm.243839 NR_131106 ENSMUSG00000085740 4930505K14Rik - RIKEN cDNA 4930505K14 gene ncRNA common_peak2_63_439_-0.0318818280267799_8.76541879951127_0.321270779286038 chr11 52299857 52301196 + 0.321270779286038 NA Intergenic Intergenic -17512 NM_001313981 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak2_218_1927_0.0135642063089527_10.9196714393844_0.321270240542568 chr1 93802979 93805470 + 0.321270240542568 NA intron (NM_025454, intron 1 of 7) CpG 259 NM_025454 66262 Mm.64065 NM_025454 ENSMUSG00000026283 Ing5 1700001C14Rik|1700027H23Rik|1810018M11Rik|AI225768 inhibitor of growth family, member 5 protein-coding common_peak2_52_349_-0.0354693463892168_8.43347643863772_0.3211716403005 chr11 115138457 115139909 + 0.3211716403005 NA intron (NM_001163753, intron 1 of 8) MLT1H|LTR|ERVL-MaLR -5191 NM_145634 246746 Mm.277387 NM_145634 ENSMUSG00000047798 Cd300lf CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3 CD300 molecule like family member F protein-coding common_peak2_149_1208_0.0171634902269009_10.2481802743626_0.321128078447722 chr11 50430205 50431835 + 0.321128078447722 NA promoter-TSS (NM_172557) promoter-TSS (NM_172557) 91 NM_172557 216724 Mm.390400 NM_172557 ENSMUSG00000020375 Rufy1 3000002E04Rik|Rabip4|ZFYVE12 RUN and FYVE domain containing 1 protein-coding common_peak2_102_784_-0.0250009600022505_9.60404836377786_0.321126083496432 chr7 109587369 109591149 + 0.321126083496432 NA intron (NM_029811, intron 1 of 18) intron (NM_029811, intron 1 of 18) 27309 NR_037617 76954 Mm.252009 NM_029811 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 protein-coding unique_peak2_33_192_0.0376915348924465_7.6113028047143_0.32107514714657 chr11 52569465 52570995 + 0.32107514714657 NA Intergenic Intergenic 173802 NM_153117 213673 Mm.291979 NM_153117 ENSMUSG00000036275 9530068E07Rik C85061|Kct2 RIKEN cDNA 9530068E07 gene protein-coding common_peak2_148_1228_-0.0183441982650407_10.2540971012401_0.321045741960493 chr4 6471293 6473767 + 0.321045741960493 NA Intergenic Intergenic -18259 NM_010945 18201 Mm.3059 NM_010945 ENSMUSG00000028245 Nsmaf AA959567|C630007J05|Fan neutral sphingomyelinase (N-SMase) activation associated factor protein-coding common_peak1_90_652_0.0214058611736156_9.36164211213324_0.32101107747893 chr6 127152623 127153937 + 0.32101107747893 NA intron (NR_040275, intron 1 of 1) intron (NR_040275, intron 1 of 1) -2232 NM_009829 12444 Mm.333406 NM_009829 ENSMUSG00000000184 Ccnd2 2600016F06Rik|AI256817|BF642806|C86853|Vin-1|Vin1|cD2 cyclin D2 protein-coding unique_peak2_16_89_-0.0883168353555028_6.44769467865192_0.320999317136426 chr10 126900771 126901422 + 0.320999317136426 NA intron (NM_001159559, intron 1 of 5) CpG 275 NM_026858 68876 Mm.276769 NM_026858 ENSMUSG00000025436 Xrcc6bp1 1110068E08Rik|2410012H02Rik|Atp23 XRCC6 binding protein 1 protein-coding common_peak1_16_89_-0.0883168353555028_6.44769467865192_0.320999317136426-4 chr8 72109542 72109909 + 0.320999317136426 NA exon (NM_146338, exon 2 of 2) exon (NM_146338, exon 2 of 2) 2685 NM_146338 258335 Mm.377439 NM_146338 ENSMUSG00000046881 Olfr374 MOR130-1 olfactory receptor 374 protein-coding common_peak1_16_89_-0.0883168353555028_6.44769467865192_0.320999317136426-2 chr7 67355739 67356171 + 0.320999317136426 NA intron (NM_001291192, intron 1 of 10) PB1D7|SINE|Alu 16903 NM_001291192 17258 Mm.132788 NM_001033713 ENSMUSG00000030557 Mef2a A430079H05Rik myocyte enhancer factor 2A protein-coding common_peak1_16_89_-0.0883168353555028_6.44769467865192_0.320999317136426-3 chr7 99984591 99984979 + 0.320999317136426 NA Intergenic Intergenic -4327 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding unique_peak2_16_89_-0.0883168353555028_6.44769467865192_0.320999317136426-2 chr19 29466295 29467010 + 0.320999317136426 NA intron (NM_021396, intron 5 of 5) Lx5c|LINE|L1 55335 NR_015567 77779 Mm.458738 NR_015567 ENSMUSG00000097855 A930007I19Rik - RIKEN cDNA A930007I19 gene ncRNA common_peak1_16_89_-0.0883168353555028_6.44769467865192_0.320999317136426 chr10 116929900 116930278 + 0.320999317136426 NA intron (NM_001003950, intron 3 of 9) L1M8|LINE|L1 20291 NM_001003950 216363 Mm.336394 NM_001003950 ENSMUSG00000064181 Rab3ip B230311A06|Gtpat12|Rabin3 RAB3A interacting protein protein-coding common_peak1_77_539_0.0227401637433857_9.08818567892252_0.320988662797196 chr2 122630571 122631581 + 0.320988662797196 NA exon (NM_001033256, exon 1 of 2) exon (NM_001033256, exon 1 of 2) 451 NM_001033256 214616 Mm.271306 NM_001033256 Spata5l1 AV141009|C130039A10Rik spermatogenesis associated 5-like 1 protein-coding common_peak2_184_1565_0.0150207407986898_10.6203788676904_0.320971482111045 chr7 127272342 127274797 + 0.320971482111045 NA exon (NM_009266, exon 1 of 1) exon (NM_009266, exon 1 of 1) 490 NM_009266 20768 Mm.20294 NM_009266 ENSMUSG00000049091 Sephs2 Sps2|Ysg3 selenophosphate synthetase 2 protein-coding common_peak2_134_1061_0.0177451029137625_10.061440602261_0.320955634220867 chr4 116806672 116808370 + 0.320955634220867 NA promoter-TSS (NM_026654) promoter-TSS (NM_026654) 38 NM_026654 68276 Mm.30534 NM_026654 ENSMUSG00000028688 Toe1 4930584N22Rik|4933424D16Rik|AI413517 target of EGR1, member 1 (nuclear) protein-coding common_peak1_76_550_-0.0291869677980916_9.09131502467211_0.320952040360698-2 chr3 52102249 52103539 + 0.320952040360698 NA intron (NM_001004176, intron 1 of 4) CpG 2112 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like 3 (Drosophila) protein-coding common_peak2_76_550_-0.0291869677980916_9.09131502467211_0.320952040360698 chr16 24623542 24625473 + 0.320952040360698 NA intron (NM_001145952, intron 4 of 11) intron (NM_001145952, intron 4 of 11) 95193 NR_038091 624582 Mm.439775 NR_038091 Morf4l1-ps1 A730098P11Rik mortality factor 4 like 1, pseudogene 1 pseudo common_peak1_76_550_-0.0291869677980916_9.09131502467211_0.320952040360698 chr10 85916260 85917223 + 0.320952040360698 NA promoter-TSS (NM_181650) promoter-TSS (NM_181650) -12 NM_001302887 72843 Mm.25307 NM_181650 ENSMUSG00000035529 Prdm4 1700031E19Rik|2810470D21Rik|AW552272|SC-1|SC1 PR domain containing 4 protein-coding common_peak1_42_271_-0.0417356709963883_8.06659500575214_0.320918815135971-2 chr9 70657304 70658009 + 0.320918815135971 NA promoter-TSS (NM_172772) promoter-TSS (NM_172772) -482 NM_172772 235461 Mm.170855 NM_172772 ENSMUSG00000042444 Fam63b AI465301|B230380D07Rik|mKIAA1164 family with sequence similarity 63, member B protein-coding common_peak1_42_271_-0.0417356709963883_8.06659500575214_0.320918815135971 chr9 35569469 35570285 + 0.320918815135971 NA 5' UTR (NM_029762, exon 1 of 4) 5' UTR (NM_029762, exon 1 of 4) 192 NM_029762 76832 Mm.482285 NM_029762 ENSMUSG00000050555 Hyls1 3010015K02Rik hydrolethalus syndrome 1 protein-coding common_peak2_65_438_0.0258551293118785_8.7910046941913_0.320904831483182-2 chr8 46872030 46874785 + 0.320904831483182 NA Intergenic Intergenic -113518 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak2_65_438_0.0258551293118785_8.7910046941913_0.320904831483182 chr7 63920621 63923580 + 0.320904831483182 NA intron (NM_021366, intron 1 of 1) intron (NM_021366, intron 1 of 1) 5243 NM_001256311 381994 Mm.425466 NM_001256311 ENSMUSG00000095061 E030018B13Rik Gm1697 RIKEN cDNA E030018B13 gene protein-coding common_peak1_103_793_-0.0243493301293132_9.6208205320783_0.320896263527859 chr17 15499304 15500664 + 0.320896263527859 NA promoter-TSS (NM_013684) promoter-TSS (NM_013684) 96 NM_013684 21374 Mm.244820 NM_013684 ENSMUSG00000014767 Tbp GTF2D1|Gtf2d|SCA17|TFIID TATA box binding protein protein-coding common_peak2_43_265_0.0311276183791183_8.07084624469075_0.32084473711658-2 chr18 11644659 11646162 + 0.32084473711658 NA intron (NR_045527, intron 1 of 17) MMVL30-int|LTR|ERV1 -11939 NR_045526 225182 Mm.154275 NM_175458 ENSMUSG00000041238 Rbbp8 9930104E21Rik|CtIP|RBBP-8|RIM|SAE2 retinoblastoma binding protein 8 protein-coding common_peak2_43_265_0.0311276183791183_8.07084624469075_0.32084473711658 chr1 105993549 105994448 + 0.32084473711658 NA intron (NM_001122675, intron 1 of 12) CpG 3592 NM_001122675 227449 Mm.210188 NM_001122675 ENSMUSG00000038866 Zcchc2 9930114B20Rik|AW212015 zinc finger, CCHC domain containing 2 protein-coding common_peak1_54_349_0.0300799065535866_8.46625106510912_0.320715152667869 chr4 34686691 34687441 + 0.320715152667869 NA intron (NM_011895, intron 1 of 7) CpG 372 NM_011895 24060 Mm.281885 NM_011895 ENSMUSG00000028293 Slc35a1 AA408150|AI314851 solute carrier family 35 (CMP-sialic acid transporter), member 1 protein-coding common_peak2_54_349_0.0300799065535866_8.46625106510912_0.320715152667869 chr2 174415724 174416411 + 0.320715152667869 NA intron (NM_020580, intron 1 of 14) CpG 263 NM_020580 57314 Mm.271709 NM_020580 ENSMUSG00000016253 Nelfcd 2410003I03Rik|C77797|Th1|Th1l negative elongation factor complex member C/D, Th1l protein-coding common_peak1_78_547_0.0240670081527892_9.11006558703692_0.320699398781999 chr13 73330703 73331531 + 0.320699398781999 NA intron (NM_053163, intron 1 of 1) CpG 108 NM_053163 94066 Mm.26775 NM_053163 ENSMUSG00000021607 Mrpl36 AI646041 mitochondrial ribosomal protein L36 protein-coding common_peak1_90_674_-0.0263986492181463_9.38554436732912_0.320682286303603 chr11 48787451 48788929 + 0.320682286303603 NA Intergenic ORR1E|LTR|ERVL-MaLR -12170 NM_008143 14694 Mm.5305 NM_008143 ENSMUSG00000020372 Rack1 AL033335|GB-like|Gnb2-rs1|Gnb2l1|p205 receptor for activated C kinase 1 protein-coding common_peak2_90_674_-0.0263986492181463_9.38554436732912_0.320682286303603 chr10 94827615 94830297 + 0.320682286303603 NA intron (NM_018797, intron 20 of 30) intron (NM_018797, intron 20 of 30) 115622 NM_018797 54712 Mm.256712 NM_018797 ENSMUSG00000074785 Plxnc1 2510048K12Rik|AW742158|CD232|Vespr plexin C1 protein-coding unique_peak2_24_141_-0.0637319273682984_7.11788115582053_0.320629186492666 chr10 22295003 22295923 + 0.320629186492666 NA intron (NM_009018, intron 5 of 5) intron (NM_009018, intron 5 of 5) -11257 NR_015465 606736 Mm.387042 NR_015465 ENSMUSG00000097352 C920009B18Rik - RIKEN cDNA C920009B18 gene ncRNA common_peak1_24_141_-0.0637319273682984_7.11788115582053_0.320629186492666 chr6 38359889 38360337 + 0.320629186492666 NA Intergenic GA-rich|Low_complexity|Low_complexity -5510 NM_028421 78781 Mm.25243 NM_028421 ENSMUSG00000029826 Zc3hav1 1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP zinc finger CCCH type, antiviral 1 protein-coding common_peak2_24_141_-0.0637319273682984_7.11788115582053_0.320629186492666 chr16 35055007 35055898 + 0.320629186492666 NA intron (NM_023587, intron 3 of 6) intron (NM_023587, intron 3 of 6) 33031 NM_023587 70757 Mm.27286 NM_023587 ENSMUSG00000035376 Hacd2 6330408J20Rik|AI255777|AI481689|Hcad2|Ptplb 3-hydroxyacyl-CoA dehydratase 2 protein-coding common_peak2_283_2699_-0.0123595237184659_11.392563930079_0.320579764629872 chr15 88860954 88864752 + 0.320579764629872 NA exon (NM_145478, exon 2 of 6) exon (NM_145478, exon 2 of 6) 659 NM_145478 223775 Mm.400129 NM_145478 ENSMUSG00000035828 Pim3 BC026639|Kid1 proviral integration site 3 protein-coding common_peak1_17_87_0.0452537432353699_6.48205849025498_0.320550491908828-3 chr7 135715581 135716031 + 0.320550491908828 NA intron (NM_001081117, intron 1 of 13) intron (NM_001081117, intron 1 of 13) 573 NM_001081117 17345 Mm.4078 NM_001081117 ENSMUSG00000031004 Mki67 D630048A14Rik|Ki-67|Ki67 antigen identified by monoclonal antibody Ki 67 protein-coding unique_peak2_17_87_0.0452537432353699_6.48205849025498_0.320550491908828-3 chr8 108704106 108704794 + 0.320550491908828 NA Intergenic C-rich|Low_complexity|Low_complexity -10194 NM_007496 11906 Mm.416972 NM_007496 ENSMUSG00000038872 Zfhx3 A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228 zinc finger homeobox 3 protein-coding common_peak1_17_87_0.0452537432353699_6.48205849025498_0.320550491908828 chr11 43395027 43395479 + 0.320550491908828 NA Intergenic Intergenic -20792 NR_029558 387164 NR_029558 ENSMUSG00000065601 Mir146 Mirn146|miR-146a|mmu-mir-146 microRNA 146 ncRNA common_peak1_17_87_0.0452537432353699_6.48205849025498_0.320550491908828-4 chrX 75734755 75735157 + 0.320550491908828 NA intron (NR_029443, intron 7 of 8) intron (NR_029443, intron 7 of 8) 29743 NR_029443 74396 Mm.162493 NR_029443 ENSMUSG00000087396 4933407K13Rik A130080L05Rik RIKEN cDNA 4933407K13 gene ncRNA common_peak1_17_87_0.0452537432353699_6.48205849025498_0.320550491908828-2 chr6 119371768 119372162 + 0.320550491908828 NA intron (NM_197985, intron 1 of 7) intron (NM_197985, intron 1 of 7) -41199 NM_172492 211187 Mm.121498 NM_172492 ENSMUSG00000055003 Lrtm2 A230084J22|AI841794 leucine-rich repeats and transmembrane domains 2 protein-coding unique_peak2_17_87_0.0452537432353699_6.48205849025498_0.320550491908828-2 chr19 5529415 5530002 + 0.320550491908828 NA Intergenic Intergenic -19219 NM_001024560 225861 Mm.20071 NM_001024560 ENSMUSG00000056185 Snx32 B930037P14Rik|Snx6b sorting nexin 32 protein-coding unique_peak2_17_87_0.0452537432353699_6.48205849025498_0.320550491908828 chr1 173453467 173454303 + 0.320550491908828 NA intron (NM_001013779, intron 3 of 8) intron (NM_001013779, intron 3 of 8) 33281 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_329_3194_0.0104376298912001_11.64681903078_0.320536717879069 chr1 164447998 164451496 + 0.320536717879069 NA intron (NM_009721, intron 2 of 5) intron (NM_009721, intron 2 of 5) 8608 NM_009721 11931 Mm.4550 NM_009721 ENSMUSG00000026576 Atp1b1 Atp4b|Atpb|Atpb-1|NKbeta1 ATPase, Na+/K+ transporting, beta 1 polypeptide protein-coding common_peak2_186_1620_-0.0157507014155165_10.6547930248098_0.320501247178714 chr2 78959443 78963173 + 0.320501247178714 NA Intergenic Intergenic 92261 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_33_204_-0.0493315273449193_7.65481433583299_0.320476739293924 chr12 93928876 93929369 + 0.320476739293924 NA Intergenic Intergenic 1784 NR_106201 102466888 NR_106201 ENSMUSG00000098931 Mir8099-2 Gm27692|mmu-mir-8099-2 microRNA 8099-2 ncRNA common_peak1_152_1269_-0.0188074883787888_10.3012090374701_0.320395202579521 chr19 37206963 37208340 + 0.320395202579521 NA promoter-TSS (NM_198300) promoter-TSS (NM_198300) 106 NM_001164336 69104 Mm.175989 NM_027314 ENSMUSG00000023307 March5 1810015H18Rik|2310008I22Rik|2700055A20Rik|5730499H23Rik|E130202O05Rik|MARCH-V|MITOL|Marchv|Rnf153 membrane-associated ring finger (C3HC4) 5 protein-coding common_peak2_79_556_0.0228253326634569_9.13294618367176_0.32038383843665 chr2 71211492 71212624 + 0.32038383843665 NA 5' UTR (NM_001198878, exon 1 of 19) 5' UTR (NM_001198878, exon 1 of 19) 112 NM_010064 13427 Mm.249479 NM_010064 ENSMUSG00000027012 Dync1i2 3110079H08Rik|AW554389|Dncic2 dynein cytoplasmic 1 intermediate chain 2 protein-coding common_peak2_34_199_0.0375895247488094_7.66265095214913_0.32038046118908 chr2 131422771 131423616 + 0.32038046118908 NA intron (NR_037281, intron 1 of 2) intron (NR_037281, intron 1 of 2) -68669 NM_001177834 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak1_25_138_0.0364801719174244_7.13718115868222_0.320350164789703 chr14 105957010 105957507 + 0.320350164789703 NA Intergenic Intergenic -60439 NM_011897 24064 Mm.89982 NM_011897 ENSMUSG00000022114 Spry2 sprouty2 sprouty homolog 2 (Drosophila) protein-coding common_peak1_25_138_0.0364801719174244_7.13718115868222_0.320350164789703-2 chr15 77698304 77698797 + 0.320350164789703 NA promoter-TSS (NM_001134802) promoter-TSS (NM_001134802) -339 NM_001134802 666348 Mm.303207 NM_001134802 ENSMUSG00000071716 Apol7e ENSMUSG00000071716 apolipoprotein L 7e protein-coding unique_peak2_25_138_0.0364801719174244_7.13718115868222_0.320350164789703 chr14 72682183 72683439 + 0.320350164789703 NA intron (NM_207636, intron 2 of 25) intron (NM_207636, intron 2 of 25) 27192 NM_207636 319448 Mm.205421 NM_207636 ENSMUSG00000033487 Fndc3a 1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys fibronectin type III domain containing 3A protein-coding common_peak2_25_138_0.0364801719174244_7.13718115868222_0.320350164789703 chr14 27213766 27214908 + 0.320350164789703 NA intron (NM_001289686, intron 3 of 12) intron (NM_001289686, intron 3 of 12) -23673 NM_027871 71704 Mm.248606 NM_027871 ENSMUSG00000021895 Arhgef3 1200004I24Rik|9830169H03Rik|C76747|Xpln Rho guanine nucleotide exchange factor (GEF) 3 protein-coding unique_peak2_25_138_0.0364801719174244_7.13718115868222_0.320350164789703-2 chr4 108118115 108119093 + 0.320350164789703 NA promoter-TSS (NM_011327) promoter-TSS (NM_011327) -57 NM_011327 20280 Mm.379011 NM_011327 ENSMUSG00000028603 Scp2 AA409774|AA409893|C76618|C79031|NSL-TP|SCP-2|SCP-X|SCPX|ns-LTP sterol carrier protein 2, liver protein-coding common_peak2_78_567_-0.0276480283913649_9.135923105309_0.320349400084293 chr1 52651312 52654303 + 0.320349400084293 NA TTS (NM_001142647) TTS (NM_001142647) 22102 NM_001142647 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding common_peak1_43_279_-0.04287296306466_8.10784653541264_0.320341249819614 chr11 74649429 74650276 + 0.320341249819614 NA intron (NM_001081158, intron 1 of 25) CpG 357 NM_001081158 74148 Mm.214574 NM_001081158 ENSMUSG00000020741 Cluh 1300001I01Rik|Kiaa0664|mKIAA0664 clustered mitochondria (cluA/CLU1) homolog protein-coding common_peak1_44_272_0.0334214966447792_8.10946788924224_0.320341249819614 chr7 141562186 141562750 + 0.320341249819614 NA intron (NM_007459, intron 1 of 21) CpG 288 NM_007459 11772 Mm.253090 NM_007459 ENSMUSG00000002957 Ap2a2 2410074K14Rik|AF006990|AW146353|Adtab|C78001|L25 adaptor-related protein complex 2, alpha 2 subunit protein-coding common_peak2_43_279_-0.04287296306466_8.10784653541264_0.320341249819614 chr13 100588358 100589356 + 0.320341249819614 NA Intergenic B4|SINE|B4 28087 NM_178410 218518 Mm.25300 NM_178410 ENSMUSG00000021636 Marveld2 BC003296|MARVD2|Mrvldc2|Tric|Trica|Tricb|Tricc MARVEL (membrane-associating) domain containing 2 protein-coding common_peak1_43_279_-0.04287296306466_8.10784653541264_0.320341249819614-2 chr17 31856086 31856687 + 0.320341249819614 NA promoter-TSS (NM_010831) promoter-TSS (NM_010831) -594 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak1_288_2713_0.0110634981497455_11.4117367544937_0.320321396221737 chr9 85748509 85750064 + 0.320321396221737 NA promoter-TSS (NM_001081282) promoter-TSS (NM_001081282) 48 NM_001081282 108837 Mm.22315 NM_175371 ENSMUSG00000035941 Ibtk 5430411K16Rik|AA409502|BTKI|mKIAA1417 inhibitor of Bruton agammaglobulinemia tyrosine kinase protein-coding common_peak2_356_3519_0.00984717286826609_11.7862832999588_0.320245245417628 chr12 54983831 54987191 + 0.320245245417628 NA intron (NM_013815, intron 2 of 26) CpG 825 NM_013815 217578 Mm.479583 NM_013815 ENSMUSG00000035021 Baz1a Acf1|B930060C03|BC065123|Gtl5|Wcrf180|cbp146 bromodomain adjacent to zinc finger domain 1A protein-coding common_peak2_93_679_0.0203524624746727_9.41956716737504_0.320222909389072 chr19 53944806 53945870 + 0.320222909389072 NA promoter-TSS (NM_001195338) promoter-TSS (NM_001195338) 462 NM_019658 56392 Mm.228669 NM_019658 ENSMUSG00000024976 Shoc2 AU017287|Sur8|mKIAA0862 soc-2 (suppressor of clear) homolog (C. elegans) protein-coding common_peak2_334_3254_0.0102074589750476_11.6735455575405_0.320178356383181 chr16 17083012 17088396 + 0.320178356383181 NA TTS (NM_001252444) TTS (NM_001252444) 15565 NM_001291047 106369 Mm.237941 NM_023249 ENSMUSG00000022773 Ypel1 0610009L05Rik|1700016N17Rik|1700019O22Rik|4921520K19Rik|4930511F14Rik|AV118478|DGL-1|Dgl1|Ppil2|mdgl-1 yippee-like 1 (Drosophila) protein-coding common_peak2_67_455_0.0238708691821419_8.84482544875581_0.320169503477454 chr8 25654226 25655655 + 0.320169503477454 NA intron (NM_001081269, intron 3 of 22) intron (NM_001081269, intron 3 of 22) 14363 NM_001081269 234135 Mm.217337 NM_001001735 ENSMUSG00000054823 Whsc1l1 6720429E03|A530023P05|AI528490|NSD3|WHISTLE Wolf-Hirschhorn syndrome candidate 1-like 1 (human) protein-coding common_peak2_155_1269_0.0155552903210445_10.3183904268201_0.320167641697486 chr13 12459832 12462065 + 0.320167641697486 NA intron (NM_001291057, intron 1 of 8) intron (NM_001291057, intron 1 of 8) 790 NM_001291060 56048 Mm.474138 NM_018886 ENSMUSG00000057554 Lgals8 1200015E08Rik|AI326142|D13Ertd524e|Lgals-8 lectin, galactose binding, soluble 8 protein-coding common_peak2_288_2757_-0.0121382379453809_11.4233376225413_0.320166839385229 chr1 171839428 171846530 + 0.320166839385229 NA intron (NM_001289470, intron 2 of 8) L1_Mur3|LINE|L1 3282 NM_013489 12523 Mm.259115 NM_013489 ENSMUSG00000038147 Cd84 A130013D22Rik|CDw84|SLAMF5 CD84 antigen protein-coding common_peak1_532_5826_-0.00808941520706163_12.5044928877438_0.320165886863476 chr1 52006947 52011861 + 0.320165886863476 NA intron (NM_011487, intron 1 of 23) intron (NM_011487, intron 1 of 23) 1164 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 protein-coding common_peak1_333_3290_-0.0109513942500339_11.6788346139993_0.320108258348156 chr2 165850849 165854093 + 0.320108258348156 NA intron (NM_001252584, intron 2 of 22) intron (NM_001252584, intron 2 of 22) 5702 NM_001252585 228880 Mm.227598 NM_027230 ENSMUSG00000039671 Zmynd8 1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7 zinc finger, MYND-type containing 8 protein-coding common_peak2_80_565_0.0216838401609962_9.15550016291238_0.320078243543892 chr8 104238651 104240640 + 0.320078243543892 NA intron (NR_045642, intron 4 of 8) PB1D10|SINE|Alu 8913 NR_045642 57813 Mm.183110 NM_021028 ENSMUSG00000035824 Tk2 AU024611|mt-TK thymidine kinase 2, mitochondrial protein-coding common_peak1_79_576_-0.0280686586419936_9.15839317932448_0.320044883237285 chr13 85503166 85504424 + 0.320044883237285 NA Intergenic RMER17D|LTR|ERVK -214309 NM_145452 218397 Mm.259653 NM_145452 ENSMUSG00000021549 Rasa1 Gap|RasGAP|Rasa RAS p21 protein activator 1 protein-coding common_peak2_172_1473_-0.0163102776025212_10.5173656702938_0.320002681658992 chr9 120932977 120936519 + 0.320002681658992 NA intron (NM_007614, intron 1 of 14) intron (NM_007614, intron 1 of 14) 1170 NM_001165902 12387 Mm.291928 NM_007614 ENSMUSG00000006932 Ctnnb1 Bfc|Catnb|Mesc catenin (cadherin associated protein), beta 1 protein-coding common_peak1_93_701_-0.0255838216921855_9.44253530945847_0.319919348659101 chr17 36950988 36951922 + 0.319919348659101 NA exon (NM_029632, exon 1 of 3) exon (NM_029632, exon 1 of 3) 337 NM_029632 76497 Mm.46176 NM_029632 ENSMUSG00000036398 Ppp1r11 1500041B02Rik|AV117883|Hcgv|Tcte5|Tctex-5|Tctex5 protein phosphatase 1, regulatory (inhibitor) subunit 11 protein-coding common_peak1_109_824_0.0196530204390939_9.69807681935272_0.319867028822758 chr17 29346796 29348550 + 0.319867028822758 NA exon (NM_019880, exon 1 of 12) exon (NM_019880, exon 1 of 12) 231 NM_019880 56462 Mm.285322 NM_019880 ENSMUSG00000024012 Mtch1 2310034O17Rik|AI255158|AU018396|C77849|PSAP mitochondrial carrier 1 protein-coding common_peak1_44_286_-0.0387282891110559_8.14554278212016_0.319862716070454 chr13 24509645 24510613 + 0.319862716070454 NA Intergenic ORR1F|LTR|ERVL-MaLR -72060 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_139_1138_-0.0188816948118653_10.1441111843022_0.319845703425187 chr9 118149312 118150760 + 0.319845703425187 NA 5' UTR (NM_026442, exon 1 of 4) 5' UTR (NM_026442, exon 1 of 4) 160 NM_026442 67899 Mm.9953 NM_026442 ENSMUSG00000039163 Cmc1 2010110K16Rik|2010312P05Rik|AI596001 COX assembly mitochondrial protein 1 protein-coding common_peak1_68_463_0.0246143251192219_8.87028815768718_0.319841972283742 chr6 125353896 125354969 + 0.319841972283742 NA intron (NM_011609, intron 1 of 9) intron (NM_011609, intron 1 of 9) 4709 NM_011609 21937 Mm.1258 NM_011609 ENSMUSG00000030341 Tnfrsf1a CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R tumor necrosis factor receptor superfamily, member 1a protein-coding common_peak1_123_982_-0.0211407792335621_9.9304772167238_0.319839916362912 chr18 76943481 76944726 + 0.319839916362912 NA promoter-TSS (NM_001039202) promoter-TSS (NM_001039202) -12 NM_029826 76987 Mm.236127 NM_029826 ENSMUSG00000025421 Hdhd2 0610039H12Rik|3110052N05Rik haloacid dehalogenase-like hydrolase domain containing 2 protein-coding common_peak1_34_211_-0.046474740039665_7.70468308454337_0.319822235398088 chr13 20858736 20859301 + 0.319822235398088 NA intron (NM_012054, intron 4 of 20) intron (NM_012054, intron 4 of 20) 64905 NM_012054 27052 Mm.314046 NM_012054 ENSMUSG00000021322 Aoah 4930433E13Rik acyloxyacyl hydrolase protein-coding common_peak1_34_211_-0.046474740039665_7.70468308454337_0.319822235398088-2 chr6 48742875 48743758 + 0.319822235398088 NA exon (NM_008376, exon 3 of 3) exon (NM_008376, exon 3 of 3) -2881 NM_175035 317757 Mm.455917 NM_175035 ENSMUSG00000043505 Gimap5 D630024P16|E230026N22Rik GTPase, IMAP family member 5 protein-coding common_peak2_81_573_0.0231486495760951_9.17648125146373_0.319814593351844 chr5 114689718 114691423 + 0.319814593351844 NA intron (NM_019821, intron 1 of 4) intron (NM_019821, intron 1 of 4) 365 NM_019821 56356 Mm.275766 NM_019821 ENSMUSG00000011884 Gltp 1110001F24Rik|C76925|C77564 glycolipid transfer protein protein-coding common_peak2_45_280_0.0306467950589386_8.1497497177504_0.319796283340532 chr17 73034168 73035594 + 0.319796283340532 NA Intergenic Intergenic -73104 NM_001177968 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding common_peak2_293_2815_-0.0118085543869739_11.4535273414438_0.31977099677044 chr5 122230293 122236373 + 0.31977099677044 NA intron (NM_028752, intron 2 of 6) intron (NM_028752, intron 2 of 6) 23046 NM_028752 74096 Mm.28804 NM_028752 ENSMUSG00000064267 Hvcn1 0610039P13Rik|AI450555|BTS|HV1|Vsop.|mVSOP hydrogen voltage-gated channel 1 protein-coding common_peak2_80_585_-0.0284147714293699_9.18054946870756_0.31974981726993 chr1 161743502 161745900 + 0.31974981726993 NA Intergenic Intergenic 43794 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_141_1130_0.0163886430435536_10.1515775355116_0.319746410832707 chr16 91010294 91011821 + 0.319746410832707 NA promoter-TSS (NR_028368) promoter-TSS (NR_028368) 38 NM_001045515 104015 Mm.187079 NM_001045515 ENSMUSG00000022973 Synj1 A930006D20Rik|AA675315|mKIAA0910 synaptojanin 1 protein-coding common_peak2_174_1494_-0.0163784676836123_10.5377405352437_0.319734558991623 chr7 128460231 128461963 + 0.319734558991623 NA intron (NM_009383, intron 1 of 11) CpG 416 NM_009383 21843 Mm.242072 NM_009383 ENSMUSG00000030846 Tial1 5330433G13Rik|AL033329|TIAR|mTIAR Tia1 cytotoxic granule-associated RNA binding protein-like 1 protein-coding common_peak1_35_206_0.0378107155596981_7.71239231527917_0.319732314184241 chr11 52267923 52268614 + 0.319732314184241 NA intron (NM_001313981, intron 3 of 10) intron (NM_001313981, intron 3 of 10) 14327 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding unique_peak2_35_206_0.0378107155596981_7.71239231527917_0.319732314184241 chr18 79092220 79093748 + 0.319732314184241 NA intron (NM_053099, intron 1 of 5) intron (NM_053099, intron 1 of 5) 16407 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_17_95_-0.0802771388484889_6.54482393129691_0.319710768292049-5 chr9 109875996 109876478 + 0.319710768292049 NA intron (NM_007658, intron 1 of 14) CpG 658 NM_007658 12530 Mm.307103 NM_007658 ENSMUSG00000032477 Cdc25a D9Ertd393e cell division cycle 25A protein-coding common_peak1_17_95_-0.0802771388484889_6.54482393129691_0.319710768292049-3 chr13 62684430 62684814 + 0.319710768292049 NA Intergenic RLTR22_Mur|LTR|ERVK -60440 NM_173381 211378 Mm.247448 NM_173381 ENSMUSG00000072066 6720489N17Rik 9330128I06 RIKEN cDNA 6720489N17 gene protein-coding unique_peak2_17_95_-0.0802771388484889_6.54482393129691_0.319710768292049-2 chr7 99856111 99856966 + 0.319710768292049 NA intron (NM_025668, intron 1 of 4) intron (NM_025668, intron 1 of 4) 2345 NM_025668 66624 Mm.30043 NM_025668 ENSMUSG00000035227 Spcs2 5730406I15Rik|AA408713|mKIAA0102 signal peptidase complex subunit 2 homolog (S. cerevisiae) protein-coding unique_peak2_17_95_-0.0802771388484889_6.54482393129691_0.319710768292049 chr2 103703115 103703928 + 0.319710768292049 NA intron (NM_178890, intron 5 of 16) intron (NM_178890, intron 5 of 16) 57729 NM_153126 98956 Mm.288005 NM_153126 ENSMUSG00000027185 Nat10 AI429152 N-acetyltransferase 10 protein-coding common_peak1_17_95_-0.0802771388484889_6.54482393129691_0.319710768292049-2 chr12 59216467 59216951 + 0.319710768292049 NA intron (NM_001033156, intron 1 of 3) intron (NM_001033156, intron 1 of 3) 2774 NM_001033156 70611 Mm.311026 NM_001033156 ENSMUSG00000035329 Fbxo33 5730501N20Rik|AI642135 F-box protein 33 protein-coding common_peak1_17_95_-0.0802771388484889_6.54482393129691_0.319710768292049-4 chr6 41562699 41563154 + 0.319710768292049 NA Intergenic Intergenic 41150 NM_009430 22072 Mm.276926 NM_009430 ENSMUSG00000057163 Prss2 TRY8|TRYP|Ta|Tesp4|Try2 protease, serine 2 protein-coding common_peak1_17_95_-0.0802771388484889_6.54482393129691_0.319710768292049 chr11 98907316 98907632 + 0.319710768292049 NA promoter-TSS (NM_011799) promoter-TSS (NM_011799) -415 NM_001025779 23834 Mm.20912 NM_011799 ENSMUSG00000017499 Cdc6 CDC18L cell division cycle 6 protein-coding unique_peak2_25_148_-0.0637472758212292_7.18729488255155_0.319686174940887 chr11 68939303 68940354 + 0.319686174940887 NA Intergenic RLTR20B3A_MM|LTR|ERVK -12747 NM_145746 252868 Mm.76826 NM_145746 ENSMUSG00000032921 Odf4 Oppo1 outer dense fiber of sperm tails 4 protein-coding unique_peak2_25_148_-0.0637472758212292_7.18729488255155_0.319686174940887-2 chr3 116439753 116440843 + 0.319686174940887 NA Intergenic Intergenic -16266 NM_001173553 229776 Mm.17647 NM_001080818 ENSMUSG00000033502 Cdc14a A830059A17Rik|CDC14A2|CDC14a1|Cdc14 CDC14 cell division cycle 14A protein-coding common_peak1_157_1319_-0.0176108119461436_10.3575168082727_0.319656909701357 chr4 94602287 94604101 + 0.319656909701357 NA promoter-TSS (NM_172695) promoter-TSS (NM_172695) 53 NM_172695 18786 Mm.490101 NM_172695 ENSMUSG00000028577 Plaa 2410007N06|AI536418|AU018445|AW208417|D4Ertd618e|PLA2P|PLAP|Ufd3 phospholipase A2, activating protein protein-coding common_peak1_212_1899_-0.0144896412180096_10.8845388826093_0.319642686659894 chr1 92933530 92935446 + 0.319642686659894 NA promoter-TSS (NM_011796) promoter-TSS (NM_011796) 80 NM_011796 23830 Mm.294315 NM_011796 ENSMUSG00000026270 Capn10 AW049679|Capn8|mKIAA1845 calpain 10 protein-coding common_peak1_175_1504_-0.0159130953940458_10.54759122395_0.31960952729279 chr11 69408705 69409565 + 0.31960952729279 NA intron (NM_001017426, intron 1 of 22) intron (NM_001017426, intron 1 of 22) 4540 NM_001017426 216850 Mm.261201 NM_001017426 ENSMUSG00000018476 Kdm6b 1700064E03Rik|BC038313|Jmjd3|mKIAA0346 KDM1 lysine (K)-specific demethylase 6B protein-coding common_peak1_142_1140_0.0161072702937464_10.1641367114356_0.319583231683641-2 chr8 41239360 41240589 + 0.319583231683641 NA intron (NM_023662, intron 1 of 37) CpG 215 NM_023662 18536 Mm.117896 NM_023662 ENSMUSG00000031592 Pcm1 2600002H09Rik|9430077F19Rik|C030044G17Rik pericentriolar material 1 protein-coding common_peak1_142_1140_0.0161072702937464_10.1641367114356_0.319583231683641 chr4 132421682 132422996 + 0.319583231683641 NA intron (NM_001161797, intron 1 of 12) CpG 107 NM_001161797 100169 Mm.158361 NM_175306 ENSMUSG00000066043 Phactr4 3110001B12Rik|AI527228|AW495572|C330013F19Rik|N28169|mKIAA4120 phosphatase and actin regulator 4 protein-coding unique_peak2_26_144_0.0422984768246604_7.20105832842726_0.31955881660111 chr14 76580031 76581007 + 0.31955881660111 NA Intergenic Intergenic -23630 NR_027699 72661 Mm.320384 NM_001160326 ENSMUSG00000052584 Serp2 2810032E02Rik stress-associated endoplasmic reticulum protein family member 2 protein-coding common_peak1_126_985_0.0167668577961333_9.95382726527598_0.319536373167321 chr1 34484736 34486254 + 0.319536373167321 NA Intergenic Intergenic -12935 NM_009355 21755 Mm.10725 NM_009355 ENSMUSG00000026125 Prss39 Tesp1 protease, serine 39 protein-coding common_peak2_69_471_0.0254149763480491_8.89535053753587_0.319525462621527 chr19 29100557 29102131 + 0.319525462621527 NA promoter-TSS (NM_021525) promoter-TSS (NM_021525) -31 NM_021525 59028 Mm.28630 NM_021525 ENSMUSG00000024785 Rcl1 2310040A02Rik|AI789745|C76567|RPCL1|Rnac RNA terminal phosphate cyclase-like 1 protein-coding common_peak2_141_1158_-0.0188929939730986_10.1692183540199_0.319518753957597 chr1 185328327 185330061 + 0.319518753957597 NA exon (NM_198653, exon 1 of 23) exon (NM_198653, exon 1 of 23) 207 NM_198653 381314 Mm.275841 NM_198653 ENSMUSG00000026618 Iars2 2010002H18Rik|C79125 isoleucine-tRNA synthetase 2, mitochondrial protein-coding common_peak1_56_381_-0.0329301084855746_8.56096377379296_0.319461937547533 chr9 44868991 44869832 + 0.319461937547533 NA intron (NM_001081049, intron 1 of 35) L3b|LINE|CR1 11863 NM_001081049 214162 Mm.2389 NM_001081049 ENSMUSG00000002028 Kmt2a 6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050 lysine (K)-specific methyltransferase 2A protein-coding common_peak1_143_1150_0.0158501772995052_10.176597206782_0.319422873311986 chr4 134123589 134125613 + 0.319422873311986 NA intron (NR_045571, intron 10 of 13) intron (NR_045571, intron 10 of 13) 4152 NM_080559 73723 Mm.22240 NM_080559 ENSMUSG00000028843 Sh3bgrl3 1110004L05Rik|AU022188 SH3 domain binding glutamic acid-rich protein-like 3 protein-coding common_peak1_216_1906_0.0131291856870206_10.9036537211563_0.319399699335802 chr17 28217009 28218840 + 0.319399699335802 NA intron (NM_027185, intron 3 of 10) intron (NM_027185, intron 3 of 10) 10146 NM_027185 23853 Mm.204731 NM_027185 ENSMUSG00000002257 Def6 2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6 differentially expressed in FDCP 6 protein-coding common_peak1_142_1168_-0.0188688679492284_10.181624780557_0.319359503458362 chr4 8690449 8691909 + 0.319359503458362 NA intron (NM_001277149, intron 1 of 37) CpG 773 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding common_peak2_235_2152_-0.0133815767526944_11.0654418157909_0.319324140555512 chr19 10524321 10526454 + 0.319324140555512 NA promoter-TSS (NM_025333) promoter-TSS (NM_025333) 143 NM_172302 269061 Mm.490260 NM_172302 ENSMUSG00000034820 Cpsf7 5730453I16Rik|AL022757|C330017N18Rik cleavage and polyadenylation specific factor 7 protein-coding common_peak1_18_93_0.0457753517192527_6.57747652753726_0.319317430124637 chr11 11762321 11762752 + 0.319317430124637 NA intron (NM_001301866, intron 5 of 5) intron (NM_001301866, intron 5 of 5) 46426 NM_021891 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding common_peak1_18_93_0.0457753517192527_6.57747652753726_0.319317430124637-2 chr6 38876425 38876873 + 0.319317430124637 NA promoter-TSS (NM_001294144) promoter-TSS (NM_001294144) -459 NM_001294143 15258 Mm.23790 NM_010433 ENSMUSG00000061436 Hipk2 1110014O20Rik|B230339E18Rik|Stank homeodomain interacting protein kinase 2 protein-coding common_peak2_18_93_0.0457753517192527_6.57747652753726_0.319317430124637 chr2 37451659 37452178 + 0.319317430124637 NA promoter-TSS (NM_001033960) promoter-TSS (NM_001033960) -336 NM_001033960 227800 Mm.383192 NM_146121 ENSMUSG00000035437 Rabgap1 Gapcena|mKIAA4104 RAB GTPase activating protein 1 protein-coding common_peak2_18_93_0.0457753517192527_6.57747652753726_0.319317430124637-2 chr8 22701198 22701744 + 0.319317430124637 NA intron (NM_001159774, intron 2 of 21) Lx8b|LINE|L1 5112 NM_010546 16150 Mm.277886 NM_010546 ENSMUSG00000031537 Ikbkb AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta inhibitor of kappaB kinase beta protein-coding common_peak1_11_52_0.0592427023425408_5.75754180573447_0.319297110585539 chr14 25486010 25486367 + 0.319297110585539 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 27003 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak2_178_1536_-0.016356864268003_10.5777230175568_0.319220423560727 chr13 56702409 56704885 + 0.319220423560727 NA promoter-TSS (NM_001164042) promoter-TSS (NM_001164042) -21 NM_001164042 17129 Mm.272920 NM_008541 ENSMUSG00000021540 Smad5 1110051M15Rik|AI451355|Dwf-C|Madh5|MusMLP SMAD family member 5 protein-coding common_peak2_82_602_-0.0265083227317362_9.22276003053422_0.319216744376073 chr14 106209892 106212804 + 0.319216744376073 NA Intergenic Intergenic 105150 NR_073203 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_35_218_-0.0434893865421504_7.7530423663301_0.319210354652963 chr1 161727857 161728494 + 0.319210354652963 NA Intergenic L1VL4|LINE|L1 60320 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_35_218_-0.0434893865421504_7.7530423663301_0.319210354652963-2 chr5 66069270 66070467 + 0.319210354652963 NA intron (NM_001291226, intron 2 of 5) intron (NM_001291226, intron 2 of 5) 28311 NM_139065 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding common_peak2_35_218_-0.0434893865421504_7.7530423663301_0.319210354652963 chr10 82981970 82983253 + 0.319210354652963 NA Intergenic Intergenic -2886 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 protein-coding common_peak2_257_2400_-0.0129456906368279_11.222946842912_0.319201365919889 chr13 30609201 30615860 + 0.319201365919889 NA Intergenic ORR1F|LTR|ERVL-MaLR -2513 NR_045975 75090 Mm.292232 NR_045975 ENSMUSG00000086263 4930519D14Rik - RIKEN cDNA 4930519D14 gene ncRNA common_peak1_218_1928_0.0128161144898105_10.920045485294_0.319191058961993 chr6 49263008 49264333 + 0.319191058961993 NA intron (NM_198102, intron 1 of 7) CpG 382 NM_198102 101214 Mm.196598 NM_198102 ENSMUSG00000029817 Tra2a 1500010G04Rik|AL022798|G430041M01Rik|mAWMS1 transformer 2 alpha homolog (Drosophila) protein-coding common_peak2_111_867_-0.0217618600538412_9.75067030241756_0.319188796932099 chr17 8146421 8148304 + 0.319188796932099 NA intron (NM_001083938, intron 1 of 8) intron (NM_001083938, intron 1 of 8) 426 NM_001083938 100037283 Mm.426736 NM_001083938 ENSMUSG00000095687 Rnaset2a 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2A protein-coding common_peak2_69_489_-0.0285799132926812_8.92234798235623_0.319181883602442 chr10 81383564 81385246 + 0.319181883602442 NA promoter-TSS (NM_133964) promoter-TSS (NM_133964) -23 NM_133964 102115 Mm.294975 NM_133964 ENSMUSG00000078440 Dohh 1110033C18Rik|AI585913|AL022869|Hlrc1 deoxyhypusine hydroxylase/monooxygenase protein-coding common_peak2_69_489_-0.0285799132926812_8.92234798235623_0.319181883602442-2 chr17 86166435 86168746 + 0.319181883602442 NA promoter-TSS (NM_011104) promoter-TSS (NM_011104) -195 NM_011104 18754 Mm.24614 NM_011104 ENSMUSG00000045038 Prkce 5830406C15Rik|PKC[e]|PKCepsilon|Pkce|R75156 protein kinase C, epsilon protein-coding common_peak1_145_1170_0.0154059770707704_10.2012283490366_0.319110331319927 chr9 61913798 61915331 + 0.319110331319927 NA promoter-TSS (NM_018853) promoter-TSS (NM_018853) -54 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak2_161_1360_-0.0174969573247594_10.4017028728416_0.319092243212603 chr19 5876989 5879015 + 0.319092243212603 NA promoter-TSS (NM_134154) promoter-TSS (NM_134154) -464 NM_134154 107375 Mm.5323 NM_134154 ENSMUSG00000024818 Slc25a45 AW491445 solute carrier family 25, member 45 protein-coding common_peak1_219_1939_0.0126747036841373_10.9281782889166_0.319088506025463 chr8 71366839 71368272 + 0.319088506025463 NA intron (NM_001145780, intron 2 of 8) intron (NM_001145780, intron 2 of 8) 338 NM_025917 67023 Mm.41890 NM_025917 ENSMUSG00000002395 Use1 2010315L10Rik|5730403H22Rik|AV002165|D12|Ed2|Q-snare|p31 unconventional SNARE in the ER 1 homolog (S. cerevisiae) protein-coding common_peak1_57_389_-0.0320546880506853_8.59130296972427_0.319078922229701-2 chr4 152325638 152326515 + 0.319078922229701 NA intron (NR_102291, intron 1 of 4) CpG 350 NR_102291 19934 Mm.307846 NM_009079 ENSMUSG00000028936 Rpl22 2700038K18Rik ribosomal protein L22 protein-coding common_peak2_57_389_-0.0320546880506853_8.59130296972427_0.319078922229701 chr7 35802047 35803235 + 0.319078922229701 NA promoter-TSS (NR_033567) promoter-TSS (NR_033567) 49 NR_033567 78547 Mm.406883 NR_033567 ENSMUSG00000044997 E130304I02Rik - RIKEN cDNA E130304I02 gene ncRNA common_peak1_57_389_-0.0320546880506853_8.59130296972427_0.319078922229701 chr1 194879714 194880219 + 0.319078922229701 NA Intergenic Intergenic -58855 NM_133654 12490 Mm.29798 NM_133654 ENSMUSG00000016494 Cd34 AU040960 CD34 antigen protein-coding common_peak1_36_214_0.0315908016219497_7.76398825040044_0.319042783014394 chr11 55131208 55131748 + 0.319042783014394 NA intron (NM_172258, intron 8 of 10) intron (NM_172258, intron 8 of 10) 20228 NM_172258 215332 Mm.87054 NM_172258 ENSMUSG00000049491 Slc36a3 PAT3|TRAMD2|tramdorin2 solute carrier family 36 (proton/amino acid symporter), member 3 protein-coding common_peak2_36_214_0.0315908016219497_7.76398825040044_0.319042783014394 chr6 48669271 48670649 + 0.319042783014394 NA Intergenic Intergenic -6175 NM_174960 317758 Mm.116971 NM_174960 ENSMUSG00000051124 Gimap9 A630002K24|BB145400 GTPase, IMAP family member 9 protein-coding common_peak2_98_724_0.019617278911868_9.51164582435823_0.319038950484109 chr1 120120283 120122221 + 0.319038950484109 NA promoter-TSS (NM_007830) promoter-TSS (NM_007830) 65 NM_001172074 73103 Mm.271602 NM_028439 ENSMUSG00000026388 3110009E18Rik - RIKEN cDNA 3110009E18 gene protein-coding common_peak2_112_876_-0.0209135342723314_9.76597626530857_0.319000944270122 chr15 73724214 73726219 + 0.319000944270122 NA 5' UTR (NM_001166388, exon 1 of 6) 5' UTR (NM_001166388, exon 1 of 6) 286 NM_001166388 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak1_97_737_-0.0239884579633554_9.51548277707872_0.318989711127123 chr12 102469187 102469924 + 0.318989711127123 NA promoter-TSS (NM_013747) promoter-TSS (NM_013747) -355 NM_013747 27277 Mm.273370 NM_013747 ENSMUSG00000021192 Golga5 Ret-II golgi autoantigen, golgin subfamily a, 5 protein-coding common_peak2_180_1557_-0.0162722025853075_10.597343416769_0.318973811290818 chr7 128738219 128740985 + 0.318973811290818 NA intron (NM_145955, intron 1 of 15) intron (NM_145955, intron 1 of 15) 827 NM_145955 210711 Mm.58882 NM_145955 ENSMUSG00000048170 Mcmbp 1110007A13Rik|AU017382|BC025641|MCM-BP minichromosome maintenance complex binding protein protein-coding common_peak1_26_154_-0.0539168384346427_7.24916598605692_0.318947247896035-3 chr2 29346784 29347253 + 0.318947247896035 NA exon (NM_026896, exon 1 of 8) exon (NM_026896, exon 1 of 8) 208 NM_029615 68975 Mm.330109 NM_026896 ENSMUSG00000026799 Med27 1500015J03Rik|2310042P07Rik|AA682045|Crsp8|D2Ertd434e mediator complex subunit 27 protein-coding common_peak1_26_154_-0.0539168384346427_7.24916598605692_0.318947247896035-4 chr9 110648989 110649543 + 0.318947247896035 NA intron (NM_183276, intron 1 of 53) B1_Mur1|SINE|Alu 4895 NM_183276 235627 Mm.335481 NM_183276 ENSMUSG00000056724 Nbeal2 1110014F23Rik|BC042396|mKIAA0540 neurobeachin-like 2 protein-coding common_peak1_26_154_-0.0539168384346427_7.24916598605692_0.318947247896035-2 chr10 43540477 43541086 + 0.318947247896035 NA intron (NM_026411, intron 1 of 3) CpG 213 NM_026411 67851 Mm.209953 NM_026411 ENSMUSG00000019797 1700021F05Rik - RIKEN cDNA 1700021F05 gene protein-coding common_peak1_26_154_-0.0539168384346427_7.24916598605692_0.318947247896035 chr1 172126748 172127226 + 0.318947247896035 NA intron (NM_001159525, intron 1 of 5) intron (NM_001159525, intron 1 of 5) 232 NM_023041 19298 Mm.247764 NM_023041 ENSMUSG00000003464 Pex19 Pxf peroxisomal biogenesis factor 19 protein-coding common_peak2_71_488_0.0242193292931461_8.94580031959881_0.318887022327031 chr7 34229262 34231038 + 0.318887022327031 NA exon (NM_008155, exon 1 of 18) exon (NM_008155, exon 1 of 18) 186 NM_008155 14751 Mm.589 NM_008155 ENSMUSG00000036427 Gpi1 Amf|Gpi|Gpi-1|Gpi-1r|Gpi-1s|Gpi-1t|Gpi1-r|Gpi1-s|Gpi1-t|Gpi1s|MF|NK|NK/GPI|Nlk|Org|Pgi|Phi glucose phosphate isomerase 1 protein-coding common_peak2_221_1961_0.0124211523318127_10.9443199023851_0.31888683597001 chr3 95216653 95218706 + 0.31888683597001 NA TTS (NM_019914) TTS (NM_019914) 222 NR_108026 100504029 Mm.478537 NR_108026 ENSMUSG00000097167 Gm16740 - predicted gene, 16740 ncRNA common_peak1_114_871_0.0183820661949028_9.77737535787438_0.318857502296212 chr6 35177279 35178105 + 0.318857502296212 NA promoter-TSS (NM_027513) promoter-TSS (NM_027513) 76 NM_027513 70699 Mm.261208 NM_027513 ENSMUSG00000038759 Nup205 3830404O05Rik|AV248391|mKIAA0225 nucleoporin 205 protein-coding common_peak1_130_1023_0.0170872618468731_10.0085436309234_0.318853272760708 chr7 45072647 45074252 + 0.318853272760708 NA intron (NM_001163684, intron 1 of 8) intron (NM_001163684, intron 1 of 8) 11020 NM_025533 66394 Mm.272139 NM_025533 ENSMUSG00000003421 Nosip 2310061K06Rik|CGI-25 nitric oxide synthase interacting protein protein-coding common_peak2_46_302_-0.0400428960469341_8.22315253544948_0.318853209444985 chr7 102686666 102687937 + 0.318853209444985 NA promoter-TSS (NM_198012) promoter-TSS (NM_198012) 26 NM_198012 101700 Mm.39043 NM_198012 ENSMUSG00000073968 Trim68 AI894158|F730114J12Rik|Rnf137|SS-56 tripartite motif-containing 68 protein-coding common_peak1_46_302_-0.0400428960469341_8.22315253544948_0.318853209444985 chr17 17179054 17179760 + 0.318853209444985 NA Intergenic Intergenic 58024 NM_011765 22759 Mm.436633 NM_011765 ENSMUSG00000095990 Zfp97 NGD16-4 zinc finger protein 97 protein-coding common_peak1_47_295_0.0309344136495024_8.2249205724537_0.318853209444886 chr2 129176788 129177717 + 0.318853209444886 NA TTS (NR_045264) TTS (NR_045264) 3421 NR_045264 100048701 Mm.428544 NR_045264 ENSMUSG00000084826 AI847159 OTTMUSG00000015420 expressed sequence AI847159 ncRNA common_peak2_183_1556_0.0137445085735415_10.6114254833658_0.318801714364146 chr5 124046142 124049405 + 0.318801714364146 NA Intergenic Intergenic -15513 NM_177876 330192 Mm.4079 NM_177876 ENSMUSG00000066278 Vps37b 2300007F24Rik|AI415429|BC026744 vacuolar protein sorting 37B protein-coding common_peak2_221_1997_-0.0138103892413657_10.9574356731717_0.318725153210008 chr19 5465212 5469269 + 0.318725153210008 NA intron (NM_009985, intron 2 of 9) intron (NM_009985, intron 2 of 9) 1267 NM_009985 13041 Mm.113590 NM_009985 ENSMUSG00000024910 Ctsw lymphopain cathepsin W protein-coding unique_peak2_27_151_0.0386372365743402_7.26724613173076_0.31871377757465 chr5 140521205 140522187 + 0.31871377757465 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 16087 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_265_2450_0.0113578549818776_11.2648336963578_0.318684291518178 chr11 118407857 118411209 + 0.318684291518178 NA intron (NM_029502, intron 3 of 4) intron (NM_029502, intron 3 of 4) 6267 NM_001267591 76025 Mm.177551 NM_029502 ENSMUSG00000025575 Cant1 5830420C20Rik|Apy1h|D11Bwg0554e|Entpd8|SCAN-1|Shapy calcium activated nucleotidase 1 protein-coding common_peak1_58_398_-0.0347185311805198_8.62288567063209_0.318666622773879 chrX 70384981 70385845 + 0.318666622773879 NA promoter-TSS (NM_026787) promoter-TSS (NM_026787) -500 NM_026787 68618 Mm.293255 NM_026787 ENSMUSG00000045237 1110012L19Rik - RIKEN cDNA 1110012L19 gene protein-coding common_peak2_100_742_0.0196297930668621_9.54703329707203_0.31860528211157 chr1 54845745 54848266 + 0.31860528211157 NA intron (NM_001081433, intron 1 of 27) intron (NM_001081433, intron 1 of 27) 79382 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_18_101_-0.0720611385746048_6.63639477268419_0.318578441221779-5 chr9 116367917 116368307 + 0.318578441221779 NA Intergenic Intergenic -192749 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_18_101_-0.0720611385746048_6.63639477268419_0.318578441221779-3 chr3 153724642 153725079 + 0.318578441221779 NA intron (NM_011372, intron 1 of 4) CpG 273 NM_011372 20447 Mm.296453 NM_011372 ENSMUSG00000052544 St6galnac3 Siat7c ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding common_peak1_18_101_-0.0720611385746048_6.63639477268419_0.318578441221779-2 chr3 104820236 104820718 + 0.318578441221779 NA Intergenic Intergenic -1914 NM_001163440 17454 Mm.1597 NM_008619 ENSMUSG00000002227 Mov10 C77703|Mov-10 Moloney leukemia virus 10 protein-coding common_peak1_18_101_-0.0720611385746048_6.63639477268419_0.318578441221779-4 chr6 49972968 49973425 + 0.318578441221779 NA Intergenic Intergenic -137045 NM_019939 56524 Mm.41288 NM_008016 ENSMUSG00000038388 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) protein-coding unique_peak2_18_101_-0.0720611385746048_6.63639477268419_0.318578441221779 chr15 99399791 99400782 + 0.318578441221779 NA intron (NM_001171034, intron 2 of 10) intron (NM_001171034, intron 2 of 10) 7067 NM_001171035 110213 Mm.16769 NM_026669 ENSMUSG00000023010 Tmbim6 5031406P05Rik|Bi1|Tegt transmembrane BAX inhibitor motif containing 6 protein-coding common_peak1_18_101_-0.0720611385746048_6.63639477268419_0.318578441221779 chr19 9105179 9105558 + 0.318578441221779 NA Intergenic Intergenic -17412 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_36_226_-0.0467648360795048_7.80316606925116_0.318558104382307 chr10 80656008 80656605 + 0.318558104382307 NA exon (NM_145361, exon 1 of 9) exon (NM_145361, exon 1 of 9) 765 NM_145361 208198 Mm.60720 NM_145361 ENSMUSG00000003344 Btbd2 2610037C03Rik|4930512K17Rik BTB (POZ) domain containing 2 protein-coding common_peak2_149_1209_0.0159706873140681_10.248776675819_0.318530445619255 chr17 8142909 8146394 + 0.318530445619255 NA intron (NM_001083938, intron 2 of 8) intron (NM_001083938, intron 2 of 8) 3137 NM_001083938 100037283 Mm.426736 NM_001083938 ENSMUSG00000095687 Rnaset2a 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2A protein-coding common_peak2_86_617_0.0213348027614781_9.28213042928511_0.318485749654968 chr6 120471534 120474666 + 0.318485749654968 NA intron (NM_008359, intron 3 of 12) intron (NM_008359, intron 3 of 12) 9903 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak1_37_221_0.0325606482331402_7.81069619046668_0.318479849207433 chr17 87315110 87315858 + 0.318479849207433 NA intron (NM_028639, intron 5 of 19) intron (NM_028639, intron 5 of 19) 32598 NM_028639 225049 Mm.77396 NM_028639 ENSMUSG00000036918 Ttc7 1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea tetratricopeptide repeat domain 7 protein-coding common_peak2_37_221_0.0325606482331402_7.81069619046668_0.318479849207433 chr8 36100621 36102051 + 0.318479849207433 NA intron (NM_172911, intron 2 of 5) intron (NM_172911, intron 2 of 5) 6508 NM_172911 244418 Mm.244971 NM_172911 ENSMUSG00000050271 Prag1 9830148H23|D8Ertd82e|NACK|Sgk223|mFLJ00269 PEAK1 related kinase activating pseudokinase 1 protein-coding common_peak2_131_1059_-0.0193039794169714_10.0401965597421_0.318463780463122 chr17 56672368 56674293 + 0.318463780463122 NA non-coding (NR_045519, exon 1 of 17) non-coding (NR_045519, exon 1 of 17) 105 NM_027933 71810 Mm.29608 NM_027933 ENSMUSG00000002372 Ranbp3 2610024N24Rik|AA408221 RAN binding protein 3 protein-coding common_peak2_85_628_-0.0245767254389833_9.2846278441598_0.318457730185773 chr2 69716091 69718285 + 0.318457730185773 NA Intergenic Lx8|LINE|L1 -4582 NM_177244 320720 Mm.289566 NM_177244 ENSMUSG00000027086 Fastkd1 5330408N05Rik|mKIAA1800 FAST kinase domains 1 protein-coding common_peak2_85_628_-0.0245767254389833_9.2846278441598_0.318457730185773-2 chr7 43579049 43580656 + 0.318457730185773 NA intron (NM_172482, intron 1 of 3) intron (NM_172482, intron 1 of 3) 266 NM_172482 210105 Mm.234422 NM_172482 ENSMUSG00000030469 Zfp719 8030458J18|9430094P17Rik|C630016O21Rik|mszf6 zinc finger protein 719 protein-coding common_peak1_115_905_-0.0214793031609535_9.81262758846576_0.318421227499231 chr19 24526525 24528135 + 0.318421227499231 NA intron (NM_008846, intron 1 of 14) intron (NM_008846, intron 1 of 14) 28497 NM_008846 18719 Mm.217214 NM_008846 ENSMUSG00000024867 Pip5k1b PI4P5K-I[b]|PIP5K1-beta|PIP5KIbeta|Pipk5b|STM7 phosphatidylinositol-4-phosphate 5-kinase, type 1 beta protein-coding common_peak2_48_303_0.0289487234670993_8.26240187517713_0.318387982719067 chr6 99274832 99276205 + 0.318387982719067 NA intron (NM_053202, intron 2 of 18) intron (NM_053202, intron 2 of 18) -9003 NM_001197321 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_100_764_-0.0224677439745573_9.56808206559274_0.318350395408141 chr7 98816236 98817465 + 0.318350395408141 NA Intergenic Intergenic -18262 NM_001285794 22411 Mm.22182 NM_009519 ENSMUSG00000015957 Wnt11 - wingless-type MMTV integration site family, member 11 protein-coding common_peak1_149_1237_-0.0170335797382393_10.2652788093451_0.318331251343516 chr9 14276256 14277613 + 0.318331251343516 NA intron (NM_030261, intron 1 of 9) intron (NM_030261, intron 1 of 9) 633 NM_030261 75747 Mm.325126 NM_030261 ENSMUSG00000032009 Sesn3 5630400E15Rik|BC003348|SEST3 sestrin 3 protein-coding unique_peak2_11_58_-0.095479892456102_5.83490310313379_0.318326940901209 chr11 23067315 23067785 + 0.318326940901209 NA Intergenic Intergenic 54163 NM_028672 73873 Mm.252406 NM_028672 ENSMUSG00000049811 Fam161a 4930430E16Rik family with sequence similarity 161, member A protein-coding common_peak1_11_58_-0.095479892456102_5.83490310313379_0.318326940901209 chr5 147448436 147448802 + 0.318326940901209 NA intron (NM_028291, intron 1 of 18) intron (NM_028291, intron 1 of 18) 18039 NM_028291 72587 Mm.320469 NM_028291 ENSMUSG00000029647 Pan3 2700050F09Rik|A430027N15Rik|AU014670 PAN3 poly(A) specific ribonuclease subunit protein-coding common_peak1_60_398_0.0242745148246275_8.65238219363466_0.318315633418376 chr17 34398323 34399298 + 0.318315633418376 NA promoter-TSS (NM_001163855) promoter-TSS (NM_001163855) -10 NM_001001177 407788 Mm.73205 NM_001001177 ENSMUSG00000057246 BC051142 NG8|TSBP|Tesb|Tesbp cDNA sequence BC051142 protein-coding common_peak2_132_1069_-0.0194947686261493_10.0536476969754_0.318299695726222 chr13 37993021 37994888 + 0.318299695726222 NA intron (NM_025965, intron 1 of 7) CpG 236 NM_025965 107513 Mm.426670 NM_025965 ENSMUSG00000021427 Ssr1 2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA signal sequence receptor, alpha protein-coding common_peak2_72_515_-0.0289082290376257_8.99677314090444_0.31825737500512 chr11 87086016 87087539 + 0.31825737500512 NA promoter-TSS (NM_024262) promoter-TSS (NM_024262) 0 NM_024262 74133 Mm.23257 NM_024262 ENSMUSG00000020495 Smg8 1200011M11Rik smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_87_626_0.0207007322646238_9.30267199893435_0.318236771686821 chr4 140771244 140772725 + 0.318236771686821 NA intron (NM_011061, intron 1 of 15) intron (NM_011061, intron 1 of 15) 2219 NM_011061 18602 Mm.250358 NM_011061 ENSMUSG00000025330 Padi4 Pad4|Pdi4 peptidyl arginine deiminase, type IV protein-coding common_peak2_19_99_0.047278037856052_6.66749520870275_0.31823090136031 chr2 102875744 102876532 + 0.31823090136031 NA intron (NM_001039150, intron 1 of 13) intron (NM_001039150, intron 1 of 13) 25527 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding unique_peak2_19_99_0.047278037856052_6.66749520870275_0.31823090136031-2 chr8 123006837 123007964 + 0.31823090136031 NA intron (NR_037865, intron 1 of 13) MER58B|DNA|hAT-Charlie 34884 NR_037865 77087 Mm.31567 NM_001081379 ENSMUSG00000035569 Ankrd11 2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod ankyrin repeat domain 11 protein-coding unique_peak2_19_99_0.047278037856052_6.66749520870275_0.31823090136031 chr12 69420330 69421302 + 0.31823090136031 NA Intergenic Intergenic 48666 NM_007481 11845 Mm.27308 NM_007481 ENSMUSG00000044147 Arf6 AI788669|AW496366 ADP-ribosylation factor 6 protein-coding common_peak1_19_99_0.047278037856052_6.66749520870275_0.31823090136031 chr2 37451586 37452192 + 0.31823090136031 NA promoter-TSS (NM_001033960) promoter-TSS (NM_001033960) -365 NM_001033960 227800 Mm.383192 NM_146121 ENSMUSG00000035437 Rabgap1 Gapcena|mKIAA4104 RAB GTPase activating protein 1 protein-coding common_peak2_249_2270_0.0116210994941728_11.154922540454_0.318224639422889 chr2 152787901 152792357 + 0.318224639422889 NA intron (NM_009743, intron 2 of 2) intron (NM_009743, intron 2 of 2) 35956 NM_053091 84682 Mm.196668 NM_053091 ENSMUSG00000009876 Cox4i2 Cox4b|CoxIV-2 cytochrome c oxidase subunit IV isoform 2 protein-coding common_peak1_150_1247_-0.0168818338766972_10.2769613019239_0.31819172360127 chr15 76326660 76328486 + 0.31819172360127 NA exon (NM_175399, exon 1 of 3) exon (NM_175399, exon 1 of 3) 176 NM_175399 109075 Mm.322752 NM_175399 ENSMUSG00000034259 Exosc4 1110039I09Rik|1500001N04Rik|Rrp41 exosome component 4 protein-coding common_peak2_133_1078_-0.0183231381519366_10.066317580412_0.318154638128061 chr4 86575028 86576653 + 0.318154638128061 NA 5' UTR (NM_178376, exon 1 of 1) 5' UTR (NM_178376, exon 1 of 1) 167 NM_178376 68441 Mm.31178 NM_178376 ENSMUSG00000070934 Rraga 1300010C19Rik|AI255374|FIP-1|RAGA Ras-related GTP binding A protein-coding common_peak1_250_2282_0.0110823365892969_11.1622563125194_0.318134594949168 chr11 97104346 97107094 + 0.318134594949168 NA intron (NM_019507, intron 1 of 5) B1_Mur2|SINE|Alu 9611 NM_019507 57765 Mm.94519 NM_019507 ENSMUSG00000001444 Tbx21 TBT1|Tbet|Tblym T-box 21 protein-coding common_peak1_251_2293_0.0111841063086686_11.1692417291702_0.318052878702949 chr14 87415349 87417538 + 0.318052878702949 NA promoter-TSS (NM_172605) promoter-TSS (NM_172605) -140 NM_172605 219249 Mm.35168 NM_172605 ENSMUSG00000022019 Tdrd3 4732418C03Rik|6720468N18 tudor domain containing 3 protein-coding common_peak2_343_3363_0.00960211355787344_11.7207630470341_0.318050459853623 chr19 8711420 8714613 + 0.318050459853623 NA intron (NM_008577, intron 1 of 8) intron (NM_008577, intron 1 of 8) 881 NM_008577 17254 Mm.4114 NM_008577 ENSMUSG00000010095 Slc3a2 4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 protein-coding common_peak1_135_1072_0.015938833776719_10.0754037776449_0.318043489354363 chr8 120100641 120102006 + 0.318043489354363 NA 5' UTR (NM_133967, exon 1 of 8) 5' UTR (NM_133967, exon 1 of 8) 149 NM_133967 102193 Mm.240076 NM_133967 ENSMUSG00000031823 Zdhhc7 AL024087|Gramp2 zinc finger, DHHC domain containing 7 protein-coding common_peak1_37_233_-0.0433882050001584_7.84867061708333_0.318024609472534 chr13 3634045 3634622 + 0.318024609472534 NA intron (NM_001267724, intron 1 of 3) CpG 301 NM_001267724 142688 Mm.253061 NM_178283 ENSMUSG00000033781 Asb13 2210015B19Rik|6430573K02Rik|Asb-13|C85285 ankyrin repeat and SOCS box-containing 13 protein-coding common_peak2_37_233_-0.0433882050001584_7.84867061708333_0.318024609472534 chr1 46893860 46895202 + 0.318024609472534 NA Intergenic ORR1D2|LTR|ERVL-MaLR -41022 NM_172653 227059 Mm.233889 NM_172653 ENSMUSG00000025986 Slc39a10 2900042E17Rik|5430433I10|mKIAA1265 solute carrier family 39 (zinc transporter), member 10 protein-coding common_peak2_134_1088_-0.0184750849989914_10.0795506962174_0.317996294628052 chr4 101646757 101648741 + 0.317996294628052 NA promoter-TSS (NM_175036) promoter-TSS (NM_175036) -34 NM_175036 230514 Mm.4756 NM_175036 ENSMUSG00000035212 Leprot LEPR|OB-RGRP|Obrgrp|VPS55 leptin receptor overlapping transcript protein-coding common_peak2_74_514_0.0217210862190864_9.01928916518012_0.317991564933286 chrX 135724178 135726666 + 0.317991564933286 NA Intergenic Intergenic -4749 NM_030106 78478 Mm.391317 NM_030106 ENSMUSG00000060726 Tmsb15a 1700129I15Rik|Tb15a|Tmsbl1|Tmsl8 thymosin beta 15a protein-coding common_peak2_60_414_-0.0324480751873146_8.68074348864063_0.317978341874065 chr6 54715020 54716703 + 0.317978341874065 NA Intergenic Intergenic 34237 NM_001289740 68235 Mm.233860 NM_026629 ENSMUSG00000038065 Mturn 2410066E13Rik|AI448550|B230212L03Rik maturin, neural progenitor differentiation regulator homolog (Xenopus) protein-coding common_peak1_60_414_-0.0324480751873146_8.68074348864063_0.317978341874065 chr6 59412119 59413293 + 0.317978341874065 NA intron (NM_183183, intron 1 of 1) intron (NM_183183, intron 1 of 1) 13584 NM_183183 243385 Mm.138080 NM_183183 ENSMUSG00000045441 Gprin3 C030038J10Rik|C730021L23 GPRIN family member 3 protein-coding common_peak1_38_228_0.0337396615109169_7.8560736188524_0.317951035570387 chr10 78169053 78169801 + 0.317951035570387 NA intron (NM_138601, intron 1 of 6) intron (NM_138601, intron 1 of 6) 341 NM_138601 28295 Mm.268691 NM_138601 ENSMUSG00000053329 D10Jhu81e C21orf33|ES1 DNA segment, Chr 10, Johns Hopkins University 81 expressed protein-coding common_peak2_49_311_0.0272252844604921_8.29901486109249_0.317946425629848 chr6 125572409 125573939 + 0.317946425629848 NA intron (NM_011708, intron 6 of 51) intron (NM_011708, intron 6 of 51) 20226 NM_011708 22371 Mm.22339 NM_011708 ENSMUSG00000001930 Vwf 6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD Von Willebrand factor protein-coding common_peak1_49_311_0.0272252844604921_8.29901486109249_0.317946425629848 chr2 32081148 32082063 + 0.317946425629848 NA intron (NM_175511, intron 1 of 1) intron (NM_175511, intron 1 of 1) 2100 NM_175511 241303 Mm.250441 NM_175511 ENSMUSG00000050592 Fam78a A130092J06Rik family with sequence similarity 78, member A protein-coding common_peak2_119_919_0.0163910040260404_9.8536855529574_0.317932385919621 chr11 54865500 54867356 + 0.317932385919621 NA promoter-TSS (NM_008248) promoter-TSS (NM_008248) -10 NM_008248 15254 Mm.425 NM_008248 ENSMUSG00000020267 Hint1 AA673479|Hint|Ipk1|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding common_peak1_119_919_0.0163910040260404_9.8536855529574_0.317932385919621 chr14 65357405 65359251 + 0.317932385919621 NA promoter-TSS (NM_199029) promoter-TSS (NM_199029) -348 NM_199029 380912 Mm.270087 NM_199029 ENSMUSG00000034522 Zfp395 BC053701|Gm910 zinc finger protein 395 protein-coding common_peak1_118_933_-0.0202063694700172_9.85717555497465_0.317895918549151 chr9 58248496 58250112 + 0.317895918549151 NA intron (NM_001311088, intron 1 of 8) B1_Mus1|SINE|Alu 482 NM_178087 18854 Mm.392123 NM_008884 ENSMUSG00000036986 Pml 1200009E24Rik|AI661194|Trim19 promyelocytic leukemia protein-coding common_peak2_171_1462_-0.0157622615118242_10.5068329233826_0.317825576869797 chr14 54360233 54362040 + 0.317825576869797 NA intron (NM_026936, intron 1 of 9) CpG 295 NM_026936 69089 Mm.182340 NM_026936 ENSMUSG00000000959 Oxa1l 1810020M02Rik|AI894287 oxidase assembly 1-like protein-coding common_peak1_253_2353_-0.0120755996780453_11.1948608051994_0.317755058324552 chr6 129745200 129747359 + 0.317755058324552 NA Intergenic RMER1A|Other|Other -5795 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak1_75_522_0.0229216895226614_9.04212798100827_0.317733832959702 chr10 80261046 80261985 + 0.317733832959702 NA promoter-TSS (NM_010255) promoter-TSS (NM_010255) -547 NM_010255 14431 Mm.7329 NM_010255 ENSMUSG00000020150 Gamt AA571402|Spintz1 guanidinoacetate methyltransferase protein-coding common_peak1_119_943_-0.0207619943914246_9.87226205216613_0.317715916898618 chr3 89773443 89774323 + 0.317715916898618 NA promoter-TSS (NR_130957) promoter-TSS (NR_130957) 274 NM_027315 70093 Mm.41438 NM_027315 ENSMUSG00000042572 Ube2q1 1110002C01Rik|2310012M18Rik|AI854014|Gtap|NICE-5|PRO3094|Ube2q ubiquitin-conjugating enzyme E2Q family member 1 protein-coding common_peak1_105_788_0.01847258661601_9.63311778332146_0.3175864081069 chr11 75254132 75255585 + 0.3175864081069 NA intron (NM_177708, intron 1 of 1) intron (NM_177708, intron 1 of 1) 60865 NM_177708 237847 Mm.82661 NM_177708 ENSMUSG00000045287 Rtn4rl1 Ngr3|Ngrh2|Ngrl2 reticulon 4 receptor-like 1 protein-coding common_peak1_49_325_-0.0361006509083364_8.33067782877691_0.317578090512859 chr2 25262639 25263260 + 0.317578090512859 NA exon (NM_175286, exon 1 of 4) exon (NM_175286, exon 1 of 4) 351 NM_175286 97031 Mm.308539 NM_175286 ENSMUSG00000048707 Tprn C430004E15Rik|C87750 taperin protein-coding unique_peak2_19_107_-0.0637532745326919_6.72301086489712_0.317575547927179-2 chr6 148291794 148292768 + 0.317575547927179 NA intron (NM_198967, intron 10 of 19) Lx3C|LINE|L1 -62375 NR_003634 66184 Mm.391542 NM_025405 ENSMUSG00000063171 Rps4l 1110033J19Rik|AA407494|Rps4y2 ribosomal protein S4-like pseudo common_peak1_19_107_-0.0637532745326919_6.72301086489712_0.317575547927179 chr12 25256930 25257390 + 0.317575547927179 NA Intergenic Intergenic 127986 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA unique_peak2_19_107_-0.0637532745326919_6.72301086489712_0.317575547927179 chr5 144215681 144216749 + 0.317575547927179 NA intron (NM_027410, intron 5 of 24) GA-rich|Low_complexity|Low_complexity 7363 NM_027410 70381 Mm.239412 NM_027410 ENSMUSG00000066621 Tecpr1 2210010N04Rik|mKIAA1358 tectonin beta-propeller repeat containing 1 protein-coding common_peak2_19_107_-0.0637532745326919_6.72301086489712_0.317575547927179 chr2 30952881 30953577 + 0.317575547927179 NA intron (NM_133673, intron 1 of 4) CpG 228 NM_133673 30934 Mm.249164 NM_133673 ENSMUSG00000026848 Tor1b 2610016F05Rik|DQ1|torsinB torsin family 1, member B protein-coding common_peak1_19_107_-0.0637532745326919_6.72301086489712_0.317575547927179-2 chr3 21991235 21991690 + 0.317575547927179 NA Intergenic B4A|SINE|B4 -85190 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding unique_peak2_19_107_-0.0637532745326919_6.72301086489712_0.317575547927179-3 chr7 12880999 12881666 + 0.317575547927179 NA exon (NM_153802, exon 1 of 4) exon (NM_153802, exon 1 of 4) 154 NM_153802 243833 Mm.293823 NM_153802 ENSMUSG00000060397 Zfp128 9630016P15Rik|Znf8|mZnf8 zinc finger protein 128 protein-coding common_peak1_19_107_-0.0637532745326919_6.72301086489712_0.317575547927179-3 chrX 57336793 57337231 + 0.317575547927179 NA exon (NM_152801, exon 2 of 22) exon (NM_152801, exon 2 of 22) 1717 NM_152801 73341 Mm.261443 NM_152801 ENSMUSG00000031133 Arhgef6 1600028C08Rik|1700038J06Rik|4930592P22Rik|alpha-PIX Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 protein-coding common_peak2_137_1118_-0.0187866895432425_10.1186009762048_0.317538359538129 chr11 62280654 62282169 + 0.317538359538129 NA promoter-TSS (NM_027198) promoter-TSS (NM_027198) -16 NM_027198 69747 Mm.141150 NM_027198 ENSMUSG00000014243 Zswim7 2410012H22Rik zinc finger SWIM-type containing 7 protein-coding common_peak2_38_240_-0.0399458866221014_7.89291639291891_0.317522631633691 chr10 81393052 81394173 + 0.317522631633691 NA intron (NM_001099917, intron 1 of 3) intron (NM_001099917, intron 1 of 3) 548 NM_001099917 72273 Mm.253147 NM_001099917 ENSMUSG00000078439 Smim24 2210404O07Rik small integral membrane protein 24 protein-coding common_peak1_38_240_-0.0399458866221014_7.89291639291891_0.317522631633691-2 chr13 43202582 43203439 + 0.317522631633691 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -31509 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak2_38_240_-0.0399458866221014_7.89291639291891_0.317522631633691-3 chr5 137596849 137597704 + 0.317522631633691 NA exon (NM_030037, exon 5 of 6) exon (NM_030037, exon 5 of 6) 3432 NM_001254762 68929 Mm.41355 NM_030037 ENSMUSG00000037221 Mospd3 1190005J19Rik|5133401H10Rik|Gtig2|R124 motile sperm domain containing 3 protein-coding common_peak2_38_240_-0.0399458866221014_7.89291639291891_0.317522631633691-2 chr2 6478445 6479435 + 0.317522631633691 NA Intergenic Intergenic 126204 NM_181399 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding common_peak1_38_240_-0.0399458866221014_7.89291639291891_0.317522631633691 chr11 67544717 67545574 + 0.317522631633691 NA intron (NM_008088, intron 1 of 13) intron (NM_008088, intron 1 of 13) 12147 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_155_1298_-0.0170176434673071_10.3346768937142_0.317513755452845 chr6 127565211 127567288 + 0.317513755452845 NA Intergenic Intergenic -11726 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding common_peak1_353_3485_0.00891637825577796_11.7718150432536_0.317456579042878 chr12 54984157 54986999 + 0.317456579042878 NA intron (NM_013815, intron 2 of 26) CpG 758 NM_013815 217578 Mm.479583 NM_013815 ENSMUSG00000035021 Baz1a Acf1|B930060C03|BC065123|Gtl5|Wcrf180|cbp146 bromodomain adjacent to zinc finger domain 1A protein-coding common_peak1_12_58_0.0461658840927353_5.90572599140821_0.317454636273721 chr10 128490900 128491247 + 0.317454636273721 NA TTS (NM_001114097) TTS (NM_001114097) 2752 NM_010860 17904 Mm.337074 NM_010860 ENSMUSG00000090841 Myl6 ESMLC|LC17|LC17-GI|MLC-3|MLC1SM|Myln myosin, light polypeptide 6, alkali, smooth muscle and non-muscle protein-coding common_peak1_28_168_-0.0522161217696162_7.37477137539738_0.31743146846906 chr11 62878810 62879307 + 0.31743146846906 NA promoter-TSS (NM_026210) promoter-TSS (NM_026210) -432 NM_026210 67510 Mm.9806 NM_026210 ENSMUSG00000014177 Tvp23b 1810036I24Rik|Fam18b|Fam18b1 trans-golgi network vesicle protein 23B protein-coding common_peak1_327_3216_-0.0102200220282445_11.6463902096386_0.317426168980603 chr10 77535913 77538792 + 0.317426168980603 NA intron (NM_008404, intron 1 of 15) intron (NM_008404, intron 1 of 15) 7004 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding common_peak2_352_3518_-0.0096825880897029_11.7761085047048_0.317409732775943 chr4 108832334 108835307 + 0.317409732775943 NA promoter-TSS (NM_025334) promoter-TSS (NM_025334) -236 NM_027453 70533 Mm.379178 NM_027453 ENSMUSG00000028568 Btf3l4 4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446 basic transcription factor 3-like 4 protein-coding common_peak2_156_1308_-0.0167737475395917_10.3458625081754_0.317387053535632 chr1 127623649 127628277 + 0.317387053535632 NA intron (NM_028135, intron 2 of 7) intron (NM_028135, intron 2 of 7) 52058 NM_028135 72160 Mm.281287 NM_028135 ENSMUSG00000026347 Tmem163 2610024A01Rik|SV31 transmembrane protein 163 protein-coding common_peak1_39_236_0.0290032899188732_7.9032448938577_0.317384610663572 chr19 24970808 24971494 + 0.317384610663572 NA Intergenic Lx8b|LINE|L1 -9535 NM_146097 226043 Mm.272127 NM_146097 ENSMUSG00000024878 Cbwd1 AV349248|BC018472 COBW domain containing 1 protein-coding common_peak1_121_962_-0.0202602256101301_9.90126187503839_0.317384288542748 chr11 63923070 63925074 + 0.317384288542748 NA Intergenic Intergenic -1788 NM_018805 54710 Mm.274426 NM_018805 ENSMUSG00000070407 Hs3st3b1 3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 protein-coding common_peak1_63_422_0.0249640323779303_8.73699586930891_0.317341765195986 chr2 165195044 165196362 + 0.317341765195986 NA intron (NM_174988, intron 1 of 11) intron (NM_174988, intron 1 of 11) 39034 NM_174988 104010 Mm.151819 NM_174988 ENSMUSG00000053166 Cdh22 - cadherin 22 protein-coding common_peak2_91_662_0.0188203663536353_9.38227524328941_0.317308052239669 chr8 46162869 46164438 + 0.317308052239669 NA Intergenic CpG -5903 NM_025747 66756 Mm.133623 NM_025747 ENSMUSG00000031631 Cfap97 1110068E21Rik|4933411K20Rik|AW049273|Kiaa1430|mKIAA1430 cilia and flagella associated protein 97 protein-coding common_peak1_91_662_0.0188203663536353_9.38227524328941_0.317308052239669 chr18 64515845 64516981 + 0.317308052239669 NA intron (NM_001142950, intron 1 of 14) CpG 144 NM_027350 70223 Mm.29192 NM_027350 ENSMUSG00000024587 Nars 3010001M15Rik|AA960128|ASNRS|C78150 asparaginyl-tRNA synthetase protein-coding common_peak2_140_1121_0.0154086429705096_10.139561282094_0.317304091893243 chr9 72661258 72663702 + 0.317304091893243 NA 5' UTR (NM_010890, exon 1 of 29) 5' UTR (NM_010890, exon 1 of 29) 133 NM_010890 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|Nedd4-1|Nedd4a|mKIAA0093 neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak1_29_165_0.0336170012507786_7.39184793197231_0.317235615355629 chr13 60934563 60935141 + 0.317235615355629 NA 3' UTR (NM_007796, exon 5 of 5) 3' UTR (NM_007796, exon 5 of 5) 1714 NM_001145799 13024 Mm.482089 NM_007796 ENSMUSG00000044258 Ctla2a Ctla-2a cytotoxic T lymphocyte-associated protein 2 alpha protein-coding common_peak1_29_165_0.0336170012507786_7.39184793197231_0.317235615355629-4 chr13 95956772 95957374 + 0.317235615355629 NA Intergenic Intergenic -65151 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding common_peak1_29_165_0.0336170012507786_7.39184793197231_0.317235615355629-5 chr8 69717187 69717731 + 0.317235615355629 NA promoter-TSS (NM_181274) promoter-TSS (NM_181274) -557 NM_001039965 66869 Mm.334581 NM_181274 ENSMUSG00000054648 Zfp869 1200003I07Rik zinc finger protein 869 protein-coding unique_peak2_29_165_0.0336170012507786_7.39184793197231_0.317235615355629 chr15 50697805 50699043 + 0.317235615355629 NA intron (NM_001310481, intron 4 of 5) intron (NM_001310481, intron 4 of 5) 190625 NM_001310481 83925 Mm.30466 NM_032000 ENSMUSG00000038679 Trps1 AI115454|AI447310|D15Ertd586e trichorhinophalangeal syndrome I (human) protein-coding common_peak1_29_165_0.0336170012507786_7.39184793197231_0.317235615355629-2 chr13 92240795 92241332 + 0.317235615355629 NA intron (NM_010829, intron 19 of 23) intron (NM_010829, intron 19 of 23) -113720 NM_010049 13361 Mm.23695 NM_010049 ENSMUSG00000021707 Dhfr 8430436I03Rik|AA607882|AI662710|AW555094 dihydrofolate reductase protein-coding common_peak1_29_165_0.0336170012507786_7.39184793197231_0.317235615355629-6 chr8 110217830 110218345 + 0.317235615355629 NA intron (NM_146215, intron 1 of 1) CpG 127 NM_146215 234728 Mm.275341 NM_146215 ENSMUSG00000046441 Cmtr2 AU022703|C730036L12Rik|Ftsjd1|MTr2 cap methyltransferase 2 protein-coding common_peak1_29_165_0.0336170012507786_7.39184793197231_0.317235615355629-3 chr13 95912613 95913133 + 0.317235615355629 NA Intergenic Intergenic -20951 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding common_peak2_77_540_0.0200709769674017_9.08952027231052_0.317181627203984 chrX 8089818 8091347 + 0.317181627203984 NA promoter-TSS (NM_009515) promoter-TSS (NM_009515) -91 NM_009515 22376 Mm.4735 NM_009515 ENSMUSG00000031165 Was U42471|Wasp Wiskott-Aldrich syndrome protein-coding common_peak2_106_819_-0.0205096801496722_9.66922525943061_0.317179360340665 chr12 102468866 102470246 + 0.317179360340665 NA promoter-TSS (NM_013747) promoter-TSS (NM_013747) -354 NM_013747 27277 Mm.273370 NM_013747 ENSMUSG00000021192 Golga5 Ret-II golgi autoantigen, golgin subfamily a, 5 protein-coding common_peak1_50_333_-0.0360335153465954_8.36568753480075_0.317176300527799-3 chr3 59099351 59100262 + 0.317176300527799 NA intron (NM_173398, intron 1 of 1) intron (NM_173398, intron 1 of 1) 2015 NM_173398 229323 Mm.123648 NM_173398 ENSMUSG00000050075 Gpr171 A630006E05|F730001G15Rik|H963 G protein-coupled receptor 171 protein-coding common_peak1_50_333_-0.0360335153465954_8.36568753480075_0.317176300527799-2 chr18 44380363 44381308 + 0.317176300527799 NA intron (NM_027490, intron 1 of 10) CpG 335 NM_027490 70640 Mm.87629 NM_027490 ENSMUSG00000024472 Dcp2 2410015D23Rik|5730537H01Rik|AL118268 decapping mRNA 2 protein-coding common_peak1_50_333_-0.0360335153465954_8.36568753480075_0.317176300527799 chr10 93179862 93180708 + 0.317176300527799 NA intron (NM_146239, intron 1 of 16) MTB_Mm|LTR|ERVL-MaLR 17500 NR_035452 100316689 NR_035452 ENSMUSG00000089214 Mir1931 mir-1931|mmu-mir-1931 microRNA 1931 ncRNA common_peak2_50_333_-0.0360335153465954_8.36568753480075_0.317176300527799 chr2 131159358 131160877 + 0.317176300527799 NA promoter-TSS (NM_001311138) promoter-TSS (NM_001311138) -36 NM_001311138 67326 Mm.27711 NM_026091 ENSMUSG00000027327 1700037H04Rik - RIKEN cDNA 1700037H04 gene protein-coding common_peak1_51_327_0.0244815512092043_8.36979278022269_0.317127444523623-2 chr8 84840061 84840859 + 0.317127444523623 NA intron (NM_009010, intron 1 of 8) CpG 205 NM_001297607 19358 Mm.255539 NM_009010 ENSMUSG00000003813 Rad23a 2310040P19Rik|AL024030|HR23A|mHR23A RAD23 homolog A, nucleotide excision repair protein protein-coding common_peak1_51_327_0.0244815512092043_8.36979278022269_0.317127444523623 chr7 90003355 90004174 + 0.317127444523623 NA Intergenic PB1D9|SINE|Alu -22788 NM_021876 13626 Mm.380914 NM_021876 ENSMUSG00000030619 Eed ENSMUSG00000039373|l(7)5Rn|l7Rn5|lusk embryonic ectoderm development protein-coding common_peak1_20_106_0.0360076573973513_6.75947081509982_0.317115895953177-2 chr2 144593941 144594357 + 0.317115895953177 NA promoter-TSS (NM_001033297) promoter-TSS (NM_001033297) 84 NM_001033297 228715 Mm.27391 NM_001033297 ENSMUSG00000074754 Gm561 - predicted gene 561 protein-coding common_peak1_20_106_0.0360076573973513_6.75947081509982_0.317115895953177 chr17 35673248 35673775 + 0.317115895953177 NA intron (NM_010364, intron 1 of 13) intron (NM_010364, intron 1 of 13) 232 NM_010364 14885 Mm.10182 NM_010364 ENSMUSG00000001524 Gtf2h4 AW545633|BTF2 p52|p52 general transcription factor II H, polypeptide 4 protein-coding unique_peak2_20_106_0.0360076573973513_6.75947081509982_0.317115895953177-2 chr6 108185159 108185877 + 0.317115895953177 NA promoter-TSS (NM_145937) promoter-TSS (NM_145937) 65 NM_145937 58911 Mm.439876 NM_145937 ENSMUSG00000030101 Sumf1 AA543204|AI463102|AI851573|FGE sulfatase modifying factor 1 protein-coding unique_peak2_20_106_0.0360076573973513_6.75947081509982_0.317115895953177 chr12 73564866 73565683 + 0.317115895953177 NA Intergenic Intergenic 16791 NR_044985 73644 Mm.369885 NR_044985 2210039B01Rik - RIKEN cDNA 2210039B01 gene ncRNA common_peak2_178_1535_-0.0154179152983875_10.577253543072_0.317022900911457 chr10 68191406 68194233 + 0.317022900911457 NA intron (NM_023598, intron 3 of 9) intron (NM_023598, intron 3 of 9) 85907 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak1_108_816_0.0175499673839532_9.68296725183766_0.317022090885469 chrX 8096307 8097667 + 0.317022090885469 NA promoter-TSS (NR_003632) promoter-TSS (NR_003632) -100 NR_003632 627782 Mm.305432 NM_001037930 ENSMUSG00000086404 Gm6787 EG627782 proteasome (prosome, macropain) subunit, beta type 7 pseudogene pseudo common_peak2_64_431_0.0220270181694282_8.76590101124818_0.317004270695952 chr11 96943141 96944808 + 0.317004270695952 NA promoter-TSS (NM_134021) promoter-TSS (NM_134021) 45 NM_134021 103711 Mm.254704 NM_134021 ENSMUSG00000018659 Pnpo AI415282 pyridoxine 5'-phosphate oxidase protein-coding unique_peak2_39_248_-0.0422553932509482_7.93887423544261_0.316984069209237 chr15 89291622 89293172 + 0.316984069209237 NA intron (NM_001081030, intron 35 of 39) intron (NM_001081030, intron 35 of 39) 13335 NR_105924 102465981 NR_105924 ENSMUSG00000098442 Mir6959 Gm27807|mmu-mir-6959 microRNA 6959 ncRNA common_peak2_39_248_-0.0422553932509482_7.93887423544261_0.316984069209237 chrX 12005698 12007252 + 0.316984069209237 NA Intergenic CpG 74078 NM_175045 71458 Mm.196328 NM_029510 ENSMUSG00000040363 Bcor 2900008C10Rik|5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575 BCL6 interacting corepressor protein-coding common_peak1_39_248_-0.0422553932509482_7.93887423544261_0.316984069209237 chr11 107392713 107393510 + 0.316984069209237 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 77609 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_107_829_-0.0215353370219802_9.6861998577233_0.316983250974129 chr15 55071688 55072710 + 0.316983250974129 NA promoter-TSS (NM_001081288) promoter-TSS (NM_001081288) -47 NM_001081288 319944 Mm.380957 NM_001081288 ENSMUSG00000037343 Taf2 150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150 TATA-box binding protein associated factor 2 protein-coding common_peak1_200_1736_0.0122961775926136_10.7685301275067_0.316967463737204 chr19 3904788 3907253 + 0.316967463737204 NA promoter-TSS (NM_016921) promoter-TSS (NM_016921) -790 NM_016921 27060 Mm.271689 NM_016921 ENSMUSG00000001750 Tcirg1 ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 protein-coding common_peak2_78_548_0.0214367521081176_9.11138071505926_0.316947752216702 chrX 155261729 155263250 + 0.316947752216702 NA promoter-TSS (NM_019736) promoter-TSS (NM_019736) 46 NM_019736 56360 Mm.268710 NM_019736 ENSMUSG00000025287 Acot9 0610041P13Rik|Acate2|C76421|MT-ACT48|MTE-2|U8|p48 acyl-CoA thioesterase 9 protein-coding common_peak1_78_548_0.0214367521081176_9.11138071505926_0.316947752216702 chr3 27316549 27317561 + 0.316947752216702 NA promoter-TSS (NM_009425) promoter-TSS (NM_009425) -22 NM_009425 22035 Mm.1062 NM_009425 ENSMUSG00000039304 Tnfsf10 A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Tnlg6a|Trail tumor necrosis factor (ligand) superfamily, member 10 protein-coding common_peak2_77_558_-0.0271487120489731_9.1131301168187_0.316918993214037 chr4 19708065 19709840 + 0.316918993214037 NA promoter-TSS (NM_177327) promoter-TSS (NM_177327) 52 NM_177327 107568 Mm.78312 NM_177327 ENSMUSG00000041058 Wwp1 8030445B08Rik|AIP5|SDRP1|Tiul1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding common_peak1_160_1348_-0.0156777195892897_10.3898357731536_0.316899142760219 chr2 154612499 154614013 + 0.316899142760219 NA promoter-TSS (NM_199304) promoter-TSS (NM_199304) -112 NM_199304 228807 Mm.103555 NM_199304 ENSMUSG00000059842 Zfp341 Znf341 zinc finger protein 341 protein-coding common_peak2_93_680_0.0182324106003033_9.42062719331222_0.316880299986772 chr15 5184720 5186646 + 0.316880299986772 NA 5' UTR (NM_026213, exon 1 of 5) 5' UTR (NM_026213, exon 1 of 5) 123 NM_026213 67515 Mm.254979 NM_026213 ENSMUSG00000022151 Ttc33 2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf tetratricopeptide repeat domain 33 protein-coding common_peak1_52_334_0.0277244800979766_8.40187952539412_0.31679355941377 chr2 72838380 72839306 + 0.31679355941377 NA Intergenic Intergenic -25126 NR_102349 76218 Mm.75260 NR_102348 ENSMUSG00000085427 6430710C18Rik 5033406J01Rik RIKEN cDNA 6430710C18 gene ncRNA unique_peak2_29_175_-0.0507751860395942_7.4340440256175_0.316765853866018 chr7 27571797 27573105 + 0.316765853866018 NA intron (NM_175107, intron 7 of 9) intron (NM_175107, intron 7 of 9) 11975 NM_001122767 66367 Mm.29831 NM_175107 ENSMUSG00000049643 2310022A10Rik - RIKEN cDNA 2310022A10 gene protein-coding common_peak2_364_3665_-0.00956645727593752_11.8352078419019_0.316750685437813 chr9 121296887 121300677 + 0.316750685437813 NA Intergenic Intergenic -21610 NM_177589 209012 Mm.371804 NM_177589 ENSMUSG00000040936 Ulk4 4932415A06Rik|A730098P15 unc-51-like kinase 4 protein-coding common_peak2_201_1779_-0.0142010210619485_10.7905610153228_0.316724485424973 chr1 34841587 34843968 + 0.316724485424973 NA intron (NM_174997, intron 1 of 6) CpG 273 NM_001160235 214469 Mm.120151 NM_174997 ENSMUSG00000037503 Fam168b mKIAA4042 family with sequence similarity 168, member B protein-coding common_peak1_65_439_0.0225725453225767_8.79264598618595_0.316715788291169 chr2 3284138 3284990 + 0.316715788291169 NA intron (NM_008708, intron 1 of 13) CpG 352 NM_001290370 18108 Mm.65021 NM_008708 ENSMUSG00000026643 Nmt2 A930001K02Rik|AI605445|AU044698|hNMT-2 N-myristoyltransferase 2 protein-coding common_peak2_64_447_-0.0304404017247073_8.79213472119525_0.316715788291169 chr10 116949634 116951430 + 0.316715788291169 NA promoter-TSS (NM_001003950) promoter-TSS (NM_001003950) -30 NR_038025 71086 Mm.214134 NR_038025 4933412E12Rik - RIKEN cDNA 4933412E12 gene ncRNA common_peak1_163_1351_0.0137884511559552_10.4077736618602_0.31670048450959 chr17 8164515 8166147 + 0.31670048450959 NA promoter-TSS (NM_201230) promoter-TSS (NM_201230) -187 NM_001197046 75296 Mm.227250 NM_201230 ENSMUSG00000069135 Fgfr1op 4930553O10Rik|FOP Fgfr1 oncogene partner protein-coding common_peak1_78_566_-0.0251058338289116_9.13465200802777_0.31669260902678 chrX 56454821 56455971 + 0.31669260902678 NA intron (NM_172779, intron 1 of 16) CpG 557 NM_172779 236790 Mm.474772 NM_172779 ENSMUSG00000035967 Ints6l 4930535D10Rik|6330505F04Rik|D130066O12|Ddx26b integrator complex subunit 6 like protein-coding common_peak2_79_557_0.0202375381743014_9.13424008091634_0.31669260902678 chr11 78511417 78512884 + 0.31669260902678 NA promoter-TSS (NM_026389) promoter-TSS (NM_026389) 18 NM_199199 195040 Mm.383431 NM_199199 ENSMUSG00000051232 Tmem199 AI316787|AI848469|R74819 transmembrane protein 199 protein-coding unique_peak2_12_64_-0.0935588795738775_5.97558837324152_0.316666098280086 chr9 124081271 124081789 + 0.316666098280086 NA Intergenic IAPEy-int|LTR|ERVK -20653 NM_009915 12772 Mm.6272 NM_009915 ENSMUSG00000049103 Ccr2 Cc-ckr-2|Ccr2a|Ccr2b|Ckr2|Ckr2a|Ckr2b|Cmkbr2|mJe-r chemokine (C-C motif) receptor 2 protein-coding common_peak1_12_64_-0.0935588795738775_5.97558837324152_0.316666098280086 chr6 129733741 129734084 + 0.316666098280086 NA intron (NM_177155, intron 3 of 5) intron (NM_177155, intron 3 of 5) 6572 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding common_peak2_126_1010_-0.0193565877289696_9.97188898803853_0.316602400456209 chr13 74493387 74495077 + 0.316602400456209 NA promoter-TSS (NM_146231) promoter-TSS (NM_146231) -282 NM_146231 235956 Mm.296909 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak1_30_172_0.0320539770975818_7.45065521618552_0.316585487777787-2 chr5 125136547 125137170 + 0.316585487777787 NA intron (NM_011424, intron 1 of 46) intron (NM_011424, intron 1 of 46) 42356 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak1_30_172_0.0320539770975818_7.45065521618552_0.316585487777787 chr14 121165033 121165665 + 0.316585487777787 NA intron (NM_134082, intron 2 of 26) intron (NM_134082, intron 2 of 26) 129775 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding unique_peak2_20_114_-0.0680154071458769_6.81148234737144_0.316541337305917 chrX 102156609 102157162 + 0.316541337305917 NA intron (NM_146235, intron 1 of 1) intron (NM_146235, intron 1 of 1) 206 NM_146235 236930 Mm.31911 NM_146235 ENSMUSG00000051220 Ercc6l BC004701|D330021P09Rik excision repair cross-complementing rodent repair deficiency complementation group 6 like protein-coding common_peak2_40_255_-0.0385567349345743_7.98072163253271_0.316540879262467 chr13 51781262 51783008 + 0.316540879262467 NA intron (NM_001281880, intron 1 of 16) intron (NM_001281880, intron 1 of 16) 11612 NM_001281880 20354 Mm.33903 NM_013660 ENSMUSG00000021451 Sema4d CD100|Semacl2|Semaj|Semcl2|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding common_peak2_40_255_-0.0385567349345743_7.98072163253271_0.316540879262467-2 chr2 4918536 4919503 + 0.316540879262467 NA promoter-TSS (NM_010726) promoter-TSS (NM_010726) 23 NM_010726 16922 Mm.391704 NM_010726 ENSMUSG00000026664 Phyh AI256161|AI265699|Lnap1|PAHX phytanoyl-CoA hydroxylase protein-coding common_peak1_183_1587_-0.0146974594903782_10.6256464673978_0.316496381485946 chr5 31601810 31603844 + 0.316496381485946 NA Intergenic Intergenic -11124 NM_025796 66845 Mm.120763 NM_025796 ENSMUSG00000106918 Mrpl33 0610009M10Rik|L33mt|MRP-L33 mitochondrial ribosomal protein L33 protein-coding common_peak1_95_698_0.0178514450893719_9.45807436792012_0.316474453114387 chr9 107550004 107551132 + 0.316474453114387 NA promoter-TSS (NM_001243748) promoter-TSS (NM_001243748) -987 NM_001243748 56289 Mm.12091 NM_019713 ENSMUSG00000010067 Rassf1 123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C Ras association (RalGDS/AF-6) domain family member 1 protein-coding common_peak2_53_342_0.0267551118531379_8.43544232209938_0.316428543855561 chr14 57423447 57424599 + 0.316428543855561 NA promoter-TSS (NM_009376) promoter-TSS (NM_009376) -48 NM_009376 21821 Mm.4653 NM_009376 ENSMUSG00000040040 Ift88 AW552028|Tg737|Tg737Rpw|TgN737Rpw|Ttc10|flexo|fxo|orpk|polaris intraflagellar transport 88 protein-coding common_peak1_41_251_0.026807031484938_7.99068343924239_0.316418740618613 chr8 124949396 124950044 + 0.316418740618613 NA promoter-TSS (NM_053207) promoter-TSS (NM_053207) -466 NM_053207 112405 Mm.140619 NM_053207 ENSMUSG00000031987 Egln1 AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20 egl-9 family hypoxia-inducible factor 1 protein-coding common_peak1_186_1588_0.0130142647535045_10.6404105417253_0.316341280259854 chr5 9160738 9162372 + 0.316341280259854 NA intron (NM_011806, intron 1 of 17) CpG 221 NM_001110327 23857 Mm.22480 NM_011806 ENSMUSG00000042508 Dmtf1 Dimp|Dmp1 cyclin D binding myb-like transcription factor 1 protein-coding common_peak2_128_1029_-0.0185669356633476_9.99914515423891_0.316313173558973 chr18 14782295 14784236 + 0.316313173558973 NA promoter-TSS (NM_001100449) promoter-TSS (NM_001100449) 20 NM_001100449 72504 Mm.312233 NM_001100449 ENSMUSG00000054321 Taf4b 105kDa|2610524B04Rik|4932409F03Rik|AW987595|TAFII-105|TAFII105|Taf2c2 TATA-box binding protein associated factor 4b protein-coding common_peak2_207_1811_0.0118909381537655_10.8293127091231_0.316310334556002 chr13 43236991 43241694 + 0.316310334556002 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) 64830 NM_001033399 328232 Mm.441399 NM_001033399 ENSMUSG00000051335 Gfod1 9630032O13|AI850995 glucose-fructose oxidoreductase domain containing 1 protein-coding common_peak1_21_112_0.0396187802787633_6.83998835255457_0.316269180331012-3 chr18 60732620 60733123 + 0.316269180331012 NA Intergenic Intergenic -19482 NM_008306 15531 Mm.181862 NM_008306 ENSMUSG00000054008 Ndst1 1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein-coding common_peak2_21_112_0.0396187802787633_6.83998835255457_0.316269180331012-2 chrX 166169668 166170303 + 0.316269180331012 NA promoter-TSS (NM_146238) promoter-TSS (NM_146238) -469 NM_146238 237221 Mm.209490 NM_146238 ENSMUSG00000040621 Gemin8 B130034M20Rik|B930082C09Rik|BC023488|gemin-8 gem (nuclear organelle) associated protein 8 protein-coding common_peak1_21_112_0.0396187802787633_6.83998835255457_0.316269180331012-2 chr13 93773435 93773847 + 0.316269180331012 NA intron (NM_009712, intron 1 of 7) intron (NM_009712, intron 1 of 7) 1962 NM_009712 11881 Mm.300178 NM_009712 ENSMUSG00000042082 Arsb 1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B protein-coding unique_peak2_21_112_0.0396187802787633_6.83998835255457_0.316269180331012-2 chr3 79842164 79843042 + 0.316269180331012 NA promoter-TSS (NM_027495) promoter-TSS (NM_027495) 59 NM_027495 70652 Mm.46635 NM_027495 ENSMUSG00000027956 Tmem144 1110057I03Rik|5730537D05Rik transmembrane protein 144 protein-coding common_peak2_21_112_0.0396187802787633_6.83998835255457_0.316269180331012 chr5 141017467 141018016 + 0.316269180331012 NA Intergenic Intergenic -17145 NM_175362 108723 Mm.46187 NM_175362 ENSMUSG00000036526 Card11 0610008L17Rik|2410011D02Rik|BIMP3|CARMA1 caspase recruitment domain family, member 11 protein-coding common_peak1_21_112_0.0396187802787633_6.83998835255457_0.316269180331012 chr13 46339036 46339579 + 0.316269180331012 NA Intergenic Intergenic 65586 NM_001005422 380842 Mm.188108 NM_001005422 ENSMUSG00000063529 Stmnd1 Gm1574 stathmin domain containing 1 protein-coding unique_peak2_21_112_0.0396187802787633_6.83998835255457_0.316269180331012 chr11 115141610 115142571 + 0.316269180331012 NA intron (NM_001163753, intron 1 of 8) intron (NM_001163753, intron 1 of 8) -8098 NM_145634 246746 Mm.277387 NM_145634 ENSMUSG00000047798 Cd300lf CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3 CD300 molecule like family member F protein-coding common_peak1_206_1832_-0.013261234139808_10.83336045347_0.316268447393764 chr12 110590586 110592270 + 0.316268447393764 NA promoter-TSS (NR_033340) promoter-TSS (NR_033340) 54 NR_033340 319786 Mm.129691 NR_033340 B930059L03Rik - RIKEN cDNA B930059L03 gene ncRNA common_peak1_130_1024_0.0156790674540641_10.0092477281198_0.31620930612224 chr5 124475405 124476575 + 0.31620930612224 NA intron (NM_030259, intron 1 of 3) intron (NM_030259, intron 1 of 3) 2245 NM_030259 80291 Mm.425280 NM_030259 ENSMUSG00000029401 Rilpl2 - Rab interacting lysosomal protein-like 2 protein-coding common_peak1_147_1216_-0.016105179129605_10.2410608631489_0.316200752327651 chr6 47788009 47789256 + 0.316200752327651 NA Intergenic Intergenic 15020 NR_030485 735289 NR_030485 ENSMUSG00000076060 Mir704 Mirn704|mir-704|mmu-mir-704 microRNA 704 ncRNA common_peak2_67_456_0.0207105282888129_8.84640561920248_0.316136081062806-2 chr7 139212473 139213994 + 0.316136081062806 NA promoter-TSS (NM_001143755) promoter-TSS (NM_001143755) -42 NM_001143755 76612 Mm.17757 NM_027164 ENSMUSG00000015980 Lrrc27 1700071K18Rik|2310044E02Rik leucine rich repeat containing 27 protein-coding common_peak2_67_456_0.0207105282888129_8.84640561920248_0.316136081062806 chr19 53037747 53038839 + 0.316136081062806 NA intron (NM_133216, intron 1 of 20) CpG 361 NM_133216 170750 Mm.99776 NM_133216 ENSMUSG00000025027 Xpnpep1 D230045I08Rik|sAMP X-prolyl aminopeptidase (aminopeptidase P) 1, soluble protein-coding common_peak1_67_456_0.0207105282888129_8.84640561920248_0.316136081062806 chr13 64161741 64162730 + 0.316136081062806 NA exon (NM_019986, exon 1 of 8) exon (NM_019986, exon 1 of 8) 369 NM_019986 56541 Mm.40989 NM_019986 ENSMUSG00000021476 Habp4 4933413D03Rik|4933428J01Rik hyaluronic acid binding protein 4 protein-coding common_peak1_97_716_0.0176592393951367_9.49465892839947_0.316088870939793 chr9 55208328 55209673 + 0.316088870939793 NA promoter-TSS (NM_028049) promoter-TSS (NM_028049) 65 NM_028049 71999 Mm.276429 NM_028049 ENSMUSG00000032309 Fbxo22 0610033L19Rik|1600016C16Rik F-box protein 22 protein-coding common_peak1_148_1226_-0.0159945315552843_10.2529222678853_0.31607634969713 chr2 32553354 32554865 + 0.31607634969713 NA intron (NM_153560, intron 1 of 10) PB1D9|SINE|Alu -16749 NM_010073 13481 Mm.22001 NM_010073 ENSMUSG00000026810 Dpm2 AW557993|R75484 dolichol-phosphate (beta-D) mannosyltransferase 2 protein-coding common_peak2_41_263_-0.0403071643735995_8.02424053717165_0.316063599787708-2 chr3 107220822 107222252 + 0.316063599787708 NA intron (NM_001111143, intron 1 of 8) intron (NM_001111143, intron 1 of 8) 195 NM_001111143 229697 Mm.297051 NM_001111143 ENSMUSG00000046213 Cym Gm131 chymosin protein-coding common_peak1_41_263_-0.0403071643735995_8.02424053717165_0.316063599787708 chr9 65398301 65398942 + 0.316063599787708 NA exon (NM_001162923, exon 1 of 5) exon (NM_001162923, exon 1 of 5) 133 NM_001033158 70784 Mm.35827 NM_001033158 ENSMUSG00000041696 Rasl12 4631404I11Rik RAS-like, family 12 protein-coding common_peak2_41_263_-0.0403071643735995_8.02424053717165_0.316063599787708 chr11 49007948 49009113 + 0.316063599787708 NA Intergenic Intergenic -16284 NM_011579 21822 Mm.15793 NM_011579 ENSMUSG00000078922 Tgtp1 Gtp2|Irgb6|Mg21|Tgtp T cell specific GTPase 1 protein-coding common_peak2_42_258_0.0289188825673961_8.03126772897025_0.316005997229998 chr4 88790594 88791637 + 0.316005997229998 NA promoter-TSS (NM_001161609).8 promoter-TSS (NM_001161609).8 220 NM_001098841 545651 Mm.149203 NM_001098841 ENSMUSG00000101163 Gm13278 OTTMUSG00000011272 predicted gene 13278 protein-coding unique_peak2_42_258_0.0289188825673961_8.03126772897025_0.316005997229998 chr4 134161737 134163497 + 0.316005997229998 NA intron (NM_144527, intron 3 of 13) MuLV-int|LTR|ERV1 24468 NM_144527 70012 Mm.26542 NM_144527 ENSMUSG00000037443 Cep85 2410030J07Rik|AI173272|AI173504|Ccdc21 centrosomal protein 85 protein-coding common_peak2_81_592_-0.0238327182942211_9.19997193539889_0.315999441202719-2 chr5 66074136 66075961 + 0.315999441202719 NA intron (NM_001291226, intron 2 of 5) ORR1D1|LTR|ERVL-MaLR 23131 NM_139065 245945 Mm.36863 NM_139065 ENSMUSG00000070780 Rbm47 9530077J19Rik RNA binding motif protein 47 protein-coding common_peak1_81_592_-0.0238327182942211_9.19997193539889_0.315999441202719 chr13 100103324 100104240 + 0.315999441202719 NA exon (NM_001081061, exon 1 of 39) exon (NM_001081061, exon 1 of 39) 288 NM_001081061 544971 Mm.288546 NM_001081061 ENSMUSG00000049658 Bdp1 AI662220|AW049390|AW456745|B130055N23Rik|G630013P12Rik|TAF3B1|TFC5|TFIIIB150|TFIIIB90|Tfnr|mKIAA1241 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB protein-coding common_peak2_81_592_-0.0238327182942211_9.19997193539889_0.315999441202719 chr14 20024483 20025729 + 0.315999441202719 NA Intergenic RLTR42-int|LTR|ERVK -47857 NM_001285909 14702 Mm.41737 NM_010315 ENSMUSG00000043004 Gng2 - guanine nucleotide binding protein (G protein), gamma 2 protein-coding common_peak1_31_179_0.0310124779818493_7.5073593353206_0.31598551273595-3 chr8 123061855 123062453 + 0.31598551273595 NA Intergenic MYSERV6-int|LTR|ERVK -3354 NM_153176 234847 Mm.292075 NM_153176 ENSMUSG00000000738 Spg7 AI452278|AU015315|Cmar|PGN spastic paraplegia 7 homolog (human) protein-coding common_peak1_31_179_0.0310124779818493_7.5073593353206_0.31598551273595 chr13 54524342 54525145 + 0.31598551273595 NA exon (NM_176987, exon 2 of 10) exon (NM_176987, exon 2 of 10) 20938 NM_176987 319719 Mm.376151 NM_176987 ENSMUSG00000043183 Simc1 4732471D19Rik SUMO-interacting motifs containing 1 protein-coding common_peak1_31_179_0.0310124779818493_7.5073593353206_0.31598551273595-2 chr6 108843580 108844257 + 0.31598551273595 NA intron (NM_138677, intron 4 of 11) intron (NM_138677, intron 4 of 11) 15277 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding common_peak1_168_1430_-0.0149941081972571_10.475310902628_0.315984679738664 chr11 118336691 118338978 + 0.315984679738664 NA intron (NM_021440, intron 2 of 2) (GA)n|Simple_repeat|Simple_repeat 4700 NM_021440 58251 Mm.439815 NM_021440 ENSMUSG00000076433 BC100451 Cep295nl|Ddc8|FS39|Kiaa1731nl cDNA sequence BC100451 protein-coding unique_peak1_13_64_0.0375846258031158_6.04116012593001_0.315949812664558 chrX 141276295 141276741 + 0.315949812664558 NA intron (NM_053185, intron 3 of 44) intron (NM_053185, intron 3 of 44) 197558 NM_053185 94216 Mm.155586 NM_053185 ENSMUSG00000031273 Col4a6 BB116301 collagen, type IV, alpha 6 protein-coding unique_peak2_13_64_0.0375846258031158_6.04116012593001_0.315949812664558 chr5 113813938 113814497 + 0.315949812664558 NA Intergenic Intergenic -13865 NM_146162 231633 Mm.41681 NM_146162 ENSMUSG00000054675 Tmem119 AW208946|BC025600|obif transmembrane protein 119 protein-coding common_peak1_13_64_0.0375846258031158_6.04116012593001_0.315949812664558-2 chr19 42130088 42130508 + 0.315949812664558 NA Intergenic PB1D10|SINE|Alu -1305 NM_027106 69534 Mm.30060 NM_027106 ENSMUSG00000018821 Avpi1 2310008N12Rik|AA410041|VIT32|esu|mVIT32 arginine vasopressin-induced 1 protein-coding common_peak1_13_64_0.0375846258031158_6.04116012593001_0.315949812664558 chr11 11708364 11708747 + 0.315949812664558 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 18378 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_170_1423_0.0128998047370601_10.4821833333349_0.315911474405697 chrX 163957168 163959420 + 0.315911474405697 NA exon (NM_178794, exon 1 of 5) exon (NM_178794, exon 1 of 5) 372 NM_009453 22184 Mm.426178 NM_009453 ENSMUSG00000031370 Zrsr2 35kDa|5031411E02Rik|A230052C13Rik|C77286|U2af1-rs2|URP zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 protein-coding common_peak2_151_1231_0.0134145962610557_10.2734938388254_0.315857491610319 chr7 105742998 105745250 + 0.315857491610319 NA TTS (NM_009906) TTS (NM_009906) 214 NM_020024 24075 Mm.274846 NM_020024 ENSMUSG00000043866 Taf10 30kDa|AU041226|TAFII30|Taf2h TATA-box binding protein associated factor 10 protein-coding common_peak1_115_882_0.0156183092368156_9.79407878226687_0.315832803741648 chr7 78846370 78847413 + 0.315832803741648 NA intron (NM_029585, intron 1 of 4) intron (NM_029585, intron 1 of 4) 320 NM_029585 76375 Mm.250541 NM_029585 ENSMUSG00000030610 Det1 2610034H20Rik de-etiolated homolog 1 (Arabidopsis) protein-coding common_peak1_133_1053_0.0154968596988656_10.0494075814866_0.315793626443251 chr2 158409334 158410917 + 0.315793626443251 NA intron (NM_001291137, intron 1 of 30) CpG 272 NM_001291138 228850 Mm.398185 NM_177227 ENSMUSG00000027652 Ralgapb AI507211|B230339M05Rik|p170 Ral GTPase activating protein, beta subunit (non-catalytic) protein-coding common_peak1_54_364_-0.0304616353814637_8.49652183607665_0.315787806995224 chr17 34931244 34931920 + 0.315787806995224 NA intron (NM_010893, intron 1 of 5) intron (NM_010893, intron 1 of 5) 329 NM_010893 18010 Mm.8856 NM_010893 ENSMUSG00000007038 Neu1 AA407268|AA407316|Aglp|Apl|Bat-7|Bat7|G9|Map-2|Neu|Neu-1 neuraminidase 1 protein-coding common_peak1_21_120_-0.0590654945806435_6.88933048998427_0.315752547455812-4 chr9 32659873 32660306 + 0.315752547455812 NA Intergenic RMER4A|LTR|ERVK -35953 NM_011808 23871 Mm.292415 NM_011808 ENSMUSG00000032035 Ets1 AI196000|AI448617|D230050P06|Ets-1|Tpl1|vs E26 avian leukemia oncogene 1, 5' domain protein-coding common_peak1_21_120_-0.0590654945806435_6.88933048998427_0.315752547455812-2 chr17 17345823 17346296 + 0.315752547455812 NA Intergenic CpG -28273 NM_025934 67045 Mm.35117 NM_025934 ENSMUSG00000023852 Riok2 2010110K24Rik|2410085M17Rik RIO kinase 2 (yeast) protein-coding common_peak1_21_120_-0.0590654945806435_6.88933048998427_0.315752547455812-3 chr7 19149822 19150333 + 0.315752547455812 NA promoter-TSS (NM_026111) promoter-TSS (NM_026111) 239 NM_026943 107686 Mm.29135 NM_026943 ENSMUSG00000040824 Snrpd2 1810009A06Rik|SMD2 small nuclear ribonucleoprotein D2 protein-coding unique_peak2_21_120_-0.0590654945806435_6.88933048998427_0.315752547455812 chr1 192105895 192106758 + 0.315752547455812 NA intron (NM_001290279, intron 9 of 9) intron (NM_001290279, intron 9 of 9) -13727 NM_011633 22033 Mm.380491 NM_011633 Traf5 - TNF receptor-associated factor 5 protein-coding unique_peak2_21_120_-0.0590654945806435_6.88933048998427_0.315752547455812-2 chr14 70658758 70659914 + 0.315752547455812 NA 3' UTR (NM_023045, exon 28 of 28) 3' UTR (NM_023045, exon 28 of 28) -6252 NM_181345 328440 Mm.347749 NM_181345 ENSMUSG00000047911 Npm2 - nucleophosmin/nucleoplasmin 2 protein-coding common_peak1_21_120_-0.0590654945806435_6.88933048998427_0.315752547455812 chr1 161733152 161733622 + 0.315752547455812 NA Intergenic Intergenic 55108 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_152_1241_0.0133558350602581_10.2851273757506_0.315738632846846 chr19 37550141 37551994 + 0.315738632846846 NA intron (NM_175353, intron 1 of 21) intron (NM_175353, intron 1 of 21) 649 NM_175353 107371 Mm.24865 NM_175353 ENSMUSG00000053799 Exoc6 4833405E05Rik|AW413330|C430002C19|Sec15|Sec15l1|hbd|msec15 exocyst complex component 6 protein-coding common_peak1_116_891_0.0161780658408404_9.80898893284072_0.315684195875288 chr2 163016891 163018163 + 0.315684195875288 NA promoter-TSS (NM_172150) promoter-TSS (NM_172150) 55 NM_172150 245866 Mm.34034 NM_172150 ENSMUSG00000017858 Ift52 BC037708|NGD5 intraflagellar transport 52 protein-coding common_peak1_42_270_-0.03642187109992_8.06393810580391_0.315669443542702-2 chr14 66225286 66226026 + 0.315669443542702 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -12104 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_42_270_-0.03642187109992_8.06393810580391_0.315669443542702 chr12 78748888 78749730 + 0.315669443542702 NA intron (NM_019579, intron 1 of 14) CpG 362 NM_019579 56217 Mm.425777 NM_019579 ENSMUSG00000021112 Mpp5 3830420B02Rik|AI255216|AI644496|Pals1 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) protein-coding common_peak2_134_1063_0.0150307182167264_10.0627977946096_0.315655518056739 chr7 75891134 75894259 + 0.315655518056739 NA Intergenic Intergenic 44358 NM_029652 207952 Mm.206223 NM_029652 ENSMUSG00000055652 Klhl25 2810402K13Rik|BC027373|Enc-1 kelch-like 25 protein-coding common_peak2_31_189_-0.0469900340194238_7.54636059132124_0.315584536186344 chr11 115712444 115713663 + 0.315584536186344 NA Intergenic Intergenic -4456 NM_008163 14784 Mm.439649 NM_008163 ENSMUSG00000059923 Grb2 AA408164|Ash growth factor receptor bound protein 2 protein-coding common_peak1_43_266_0.0257141221927526_8.07355299278393_0.315560595534436 chr1 91459542 91460154 + 0.315560595534436 NA promoter-TSS (NM_011066) promoter-TSS (NM_011066) -520 NM_011066 18627 Mm.482463 NM_011066 ENSMUSG00000055866 Per2 mKIAA0347|mPer2 period circadian clock 2 protein-coding common_peak1_99_754_-0.021093019703347_9.54978632436077_0.315525913806463 chr19 45005893 45007368 + 0.315525913806463 NA promoter-TSS (NM_053164) promoter-TSS (NM_053164) 72 NM_153796 226153 Mm.105585 NM_153796 ENSMUSG00000025209 Twnk D19Ertd626e|PEO|Peo1|Twinl twinkle mtDNA helicase protein-coding common_peak2_134_1087_-0.0171496875324237_10.0788879974841_0.315493160904973 chr11 97780937 97783204 + 0.315493160904973 NA promoter-TSS (NR_028078) promoter-TSS (NR_028078) -304 NR_028078 100302498 Mm.453536 NR_028078 ENSMUSG00000064901 Snora21 MBI-3 small nucleolar RNA, H/ACA box 21 snoRNA common_peak2_215_1930_-0.0130879485519877_10.9085884746747_0.315491456174765 chr19 57359608 57362149 + 0.315491456174765 NA promoter-TSS (NR_040316) promoter-TSS (NR_040316) 21 NR_040316 320879 Mm.375089 NR_040316 ENSMUSG00000097785 B230217O12Rik - RIKEN cDNA B230217O12 gene ncRNA common_peak2_55_372_-0.0298547590509557_8.52810444072976_0.31546741057633 chr2 127921475 127923847 + 0.31546741057633 NA intron (NM_028765, intron 9 of 17) intron (NM_028765, intron 9 of 17) 68033 NM_028765 74121 Mm.244835 NM_028765 ENSMUSG00000027380 Acoxl 1200014P05Rik|AV025673 acyl-Coenzyme A oxidase-like protein-coding common_peak1_55_372_-0.0298547590509557_8.52810444072976_0.31546741057633 chr19 9106817 9107865 + 0.31546741057633 NA Intergenic Intergenic -19385 NM_011681 22287 Mm.2258 NM_011681 ENSMUSG00000024653 Scgb1a1 CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg secretoglobin, family 1A, member 1 (uteroglobin) protein-coding common_peak1_32_186_0.0304254877732433_7.56210720377426_0.315430102249358 chr14 27413281 27413765 + 0.315430102249358 NA Intergenic RSINE1|SINE|B4 -15324 NM_028945 218850 Mm.247767 NM_028945 ENSMUSG00000040651 Fam208a 4732418E12|4933409E02Rik|D14Abb1e|MommeD6 family with sequence similarity 208, member A protein-coding common_peak1_56_366_0.0248624667069599_8.53206748619669_0.315428336564742 chr2 127269457 127270170 + 0.315428336564742 NA promoter-TSS (NM_139308) promoter-TSS (NM_139308) -416 NM_139308 99138 Mm.41271 NM_139308 ENSMUSG00000027367 Stard7 AI852671|AL022671|AW544915 START domain containing 7 protein-coding common_peak1_22_119_0.0315702084849914_6.92267569985101_0.315387491840162 chr10 117829003 117829592 + 0.315387491840162 NA intron (NM_024457, intron 1 of 7) B4|SINE|B4 16677 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak2_22_119_0.0315702084849914_6.92267569985101_0.315387491840162 chr17 35673314 35673962 + 0.315387491840162 NA 5' UTR (NM_010364, exon 1 of 14) 5' UTR (NM_010364, exon 1 of 14) 105 NM_010364 14885 Mm.10182 NM_010364 ENSMUSG00000001524 Gtf2h4 AW545633|BTF2 p52|p52 general transcription factor II H, polypeptide 4 protein-coding unique_peak2_22_119_0.0315702084849914_6.92267569985101_0.315387491840162-2 chr2 28144768 28145720 + 0.315387491840162 NA Intergenic B4|SINE|B4 -47849 NM_001038613 56177 Mm.43278 NM_019498 ENSMUSG00000026833 Olfm1 AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3 olfactomedin 1 protein-coding unique_peak2_22_119_0.0315702084849914_6.92267569985101_0.315387491840162 chr13 43217098 43218183 + 0.315387491840162 NA intron (NM_001033399, intron 1 of 1) intron (NM_001033399, intron 1 of 1) -46139 NM_001252640 67046 Mm.269213 NM_025935 ENSMUSG00000021368 Tbc1d7 2610009C09Rik TBC1 domain family, member 7 protein-coding common_peak1_22_119_0.0315702084849914_6.92267569985101_0.315387491840162-2 chr13 108300334 108300863 + 0.315387491840162 NA Intergenic Intergenic -15739 NM_178683 218581 Mm.32318 NM_178683 ENSMUSG00000021697 Depdc1b 9830132O03|AW260467|XTP1 DEP domain containing 1B protein-coding common_peak2_85_609_0.0196740489900566_9.26250245694528_0.315365027643925 chr4 109759809 109761912 + 0.315365027643925 NA intron (NM_007983, intron 7 of 18) intron (NM_007983, intron 7 of 18) 84233 NM_007983 14084 Mm.318259 NM_007983 ENSMUSG00000010517 Faf1 AA408698|Dffrx|Fam Fas-associated factor 1 protein-coding common_peak1_100_763_-0.0205806344302903_9.5671385108206_0.315353796171827 chr7 127232023 127233354 + 0.315353796171827 NA promoter-TSS (NM_146201) promoter-TSS (NM_146201) 442 NR_030674 100043580 Mm.482209 NR_030674 ENSMUSG00000000486 Gm4532 - predicted gene 4532 ncRNA common_peak2_263_2466_-0.0113851190801739_11.26284944076_0.315347428185503 chr7 73593877 73598638 + 0.315347428185503 NA Intergenic Intergenic -37862 NR_037569 69170 Mm.34539 NR_037569 ENSMUSG00000101970 1810026B05Rik - RIKEN cDNA 1810026B05 gene ncRNA common_peak1_13_70_-0.089794680673112_6.10484977916813_0.315296283155016 chr1 52501772 52502105 + 0.315296283155016 NA Intergenic Intergenic -1490 NM_008667 17936 Mm.25903 NM_008667 ENSMUSG00000002881 Nab1 - Ngfi-A binding protein 1 protein-coding common_peak1_13_70_-0.089794680673112_6.10484977916813_0.315296283155016-3 chr8 13625574 13625980 + 0.315296283155016 NA intron (NM_009025, intron 2 of 23) intron (NM_009025, intron 2 of 23) 51810 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding unique_peak2_13_70_-0.089794680673112_6.10484977916813_0.315296283155016 chr4 47091791 47092462 + 0.315296283155016 NA exon (NM_172693, exon 1 of 10) exon (NM_172693, exon 1 of 10) 173 NM_172693 230145 Mm.132246 NM_172693 ENSMUSG00000039774 Galnt12 9130206E10|A630062B03Rik UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 protein-coding common_peak2_13_70_-0.089794680673112_6.10484977916813_0.315296283155016 chr8 45999529 45999992 + 0.315296283155016 NA promoter-TSS (NM_001039562) promoter-TSS (NM_001039562) 90 NM_001039562 654824 Mm.334517 NM_001039562 ENSMUSG00000050914 Ankrd37 - ankyrin repeat domain 37 protein-coding unique_peak2_13_70_-0.089794680673112_6.10484977916813_0.315296283155016-2 chr9 70840632 70841227 + 0.315296283155016 NA intron (NM_008280, intron 1 of 8) intron (NM_008280, intron 1 of 8) 93879 NM_008280 15450 Mm.390187 NM_008280 ENSMUSG00000032207 Lipc AI256194|HL|Hpl lipase, hepatic protein-coding common_peak1_13_70_-0.089794680673112_6.10484977916813_0.315296283155016-2 chr13 75845760 75846106 + 0.315296283155016 NA intron (NM_053108, intron 1 of 2) intron (NM_053108, intron 1 of 2) 6047 NM_053108 93692 Mm.25844 NM_053108 ENSMUSG00000021591 Glrx C86710|D13Wsu156e|Glrx1|Grx1|TTase glutaredoxin protein-coding common_peak1_176_1485_0.0124425206565135_10.5434396608669_0.315293070520434 chr10 121585939 121587632 + 0.315293070520434 NA promoter-TSS (NM_019786) promoter-TSS (NM_019786) 9 NM_019786 56480 Mm.34580 NM_019786 ENSMUSG00000020115 Tbk1 1200008B05Rik|AI462036|AW048562 TANK-binding kinase 1 protein-coding common_peak2_43_278_-0.0377112579488799_8.10526568285475_0.315243551546945 chr17 66016714 66017966 + 0.315243551546945 NA intron (NM_001025572, intron 8 of 12) MMVL30-int|LTR|ERV1 59706 NM_001025572 106585 Mm.34706 NM_001025572 ENSMUSG00000034647 Ankrd12 2900001A12Rik|AI447928|ANCO-2|AV347965|GAC-1|mKIAA0874 ankyrin repeat domain 12 protein-coding common_peak1_119_920_0.0148237088790797_9.85446920053088_0.315225009608736 chr5 20701497 20703035 + 0.315225009608736 NA 3' UTR (NM_015823, exon 22 of 22) 3' UTR (NM_015823, exon 22 of 22) 179858 NM_172992 68770 Mm.86410 NM_172992 ENSMUSG00000039987 Phtf2 1110054G21Rik|9530062N20Rik|AI447096|C77923 putative homeodomain transcription factor 2 protein-coding common_peak2_102_762_0.0160086369422086_9.58354356530564_0.315185717890851 chr15 99643178 99645845 + 0.315185717890851 NA intron (NM_012025, intron 1 of 17) intron (NM_012025, intron 1 of 17) 7145 NM_001253808 26934 Mm.273804 NM_012025 ENSMUSG00000023015 Racgap1 AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478 Rac GTPase-activating protein 1 protein-coding common_peak2_101_772_-0.0200415156110356_9.58430384611933_0.315185717890851 chr9 69124334 69126168 + 0.315185717890851 NA intron (NM_013646, intron 1 of 10) intron (NM_013646, intron 1 of 10) -164590 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding common_peak2_157_1291_0.0133210476057481_10.3420508784968_0.315171821181901 chr5 38219236 38221346 + 0.315171821181901 NA promoter-TSS (NM_025281) promoter-TSS (NM_025281) 137 NM_029162 75079 Mm.258741 NM_029162 ENSMUSG00000029127 Zbtb49 4930518A03Rik|Zfp509|Znf509 zinc finger and BTB domain containing 49 protein-coding common_peak2_176_1513_-0.0144885687906235_10.5569052055904_0.315160477895461 chr7 25076097 25079052 + 0.315160477895461 NA intron (NM_175477, intron 1 of 1) CpG 328 NM_175477 232976 Mm.41568 NM_175477 ENSMUSG00000045252 Zfp574 A630056B21Rik|Znf574 zinc finger protein 574 protein-coding common_peak2_156_1307_-0.0156711910924336_10.3453112299519_0.315139198475246 chr10 67701717 67704323 + 0.315139198475246 NA Intergenic Intergenic -154065 NM_001005419 211488 Mm.297250 NM_001005419 ENSMUSG00000057134 Ado Gm237 2-aminoethanethiol (cysteamine) dioxygenase protein-coding common_peak2_243_2239_-0.0115389435252844_11.1235135451823_0.315097627256137 chr7 105735621 105740106 + 0.315097627256137 NA promoter-TSS (NM_133951) promoter-TSS (NM_133951) -478 NM_133951 101867 Mm.231400 NM_025897 ENSMUSG00000030888 Rrp8 1500003O22Rik|2900001K19Rik|AW538116 ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding common_peak1_32_196_-0.0447318717954968_7.59968588355863_0.315057985491196 chr17 24141740 24142100 + 0.315057985491196 NA promoter-TSS (NM_001080773) promoter-TSS (NM_001080773) -326 NM_001080773 18607 Mm.10504 NM_011062 ENSMUSG00000024122 Pdpk1 Pdk1 3-phosphoinositide dependent protein kinase 1 protein-coding common_peak2_32_196_-0.0447318717954968_7.59968588355863_0.315057985491196 chr16 49873492 49874980 + 0.315057985491196 NA intron (NM_010581, intron 3 of 9) intron (NM_010581, intron 3 of 9) 18582 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak1_32_196_-0.0447318717954968_7.59968588355863_0.315057985491196-2 chr9 56530375 56530857 + 0.315057985491196 NA Intergenic Intergenic 105032 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding common_peak2_222_1974_0.0108469360025758_10.9530604059531_0.315053669889691 chr6 113305857 113308449 + 0.315053669889691 NA promoter-TSS (NM_030178) promoter-TSS (NM_030178) 16 NM_001282126 78783 Mm.356059 NM_030178 ENSMUSG00000001632 Brpf1 4833438B11Rik|4930540D11Rik|Brpf2 bromodomain and PHD finger containing, 1 protein-coding common_peak1_103_771_0.0161888297455643_9.60055145214086_0.315021538414471 chr2 166973663 166975781 + 0.315021538414471 NA intron (NM_001291160, intron 1 of 11) intron (NM_001291160, intron 1 of 11) -10005 NR_111895 20853 Mm.73276 NM_011490 ENSMUSG00000039536 Stau1 5830401L18Rik|AW549911|C85792|Stau staufen (RNA binding protein) homolog 1 (Drosophila) protein-coding common_peak2_179_1516_0.0123978896903107_10.5732043150922_0.315002749794791 chr18 37643243 37645059 + 0.315002749794791 NA promoter-TSS (NM_175770) promoter-TSS (NM_175770) 53 NM_175770 24074 Mm.236009 NM_175770 ENSMUSG00000051316 Taf7 55kDa|AI607308|BB007175|TAFII55|Taf2f TATA-box binding protein associated factor 7 protein-coding common_peak2_223_1985_0.01075177604862_10.9610257955527_0.314976268360523 chr15 79692418 79696155 + 0.314976268360523 NA intron (NM_013818, intron 2 of 11) intron (NM_013818, intron 2 of 11) 3390 NM_013818 14904 Mm.19080 NM_013818 ENSMUSG00000042535 Gtpbp1 AL022987|AW045683|C85212|GP-1|Gtpbp GTP binding protein 1 protein-coding common_peak2_86_636_-0.0223517315904473_9.30397369646108_0.314956421140131 chr2 39004101 39005969 + 0.314956421140131 NA promoter-TSS (NM_025592) promoter-TSS (NM_025592) 96 NM_025592 66489 Mm.345333 NM_025592 ENSMUSG00000062997 Rpl35 2410039E09Rik ribosomal protein L35 protein-coding common_peak1_87_627_0.0184016161750353_9.30382155697914_0.314956421140131 chr5 112282744 112284248 + 0.314956421140131 NA intron (NM_009419, intron 1 of 6) intron (NM_009419, intron 1 of 6) 6789 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak1_22_127_-0.0615391959064899_6.96923040204675_0.314928012102352 chr11 107413313 107413910 + 0.314928012102352 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 57109 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak2_33_193_0.0302357299733993_7.61503070717383_0.314914468780123 chr19 59248049 59249402 + 0.314914468780123 NA Intergenic Intergenic -12153 NM_172523 214084 Mm.268797 NM_172523 ENSMUSG00000025094 Slc18a2 1110037L13Rik|9330105E13|Vmat2 solute carrier family 18 (vesicular monoamine), member 2 protein-coding common_peak1_71_505_-0.025083590448931_8.97045177946984_0.314899827074295 chr19 8797680 8798708 + 0.314899827074295 NA intron (NM_026329, intron 2 of 7) intron (NM_026329, intron 2 of 7) 363 NM_026329 67710 Mm.22117 NM_026329 ENSMUSG00000071662 Polr2g 2410046K11Rik|A230108L04Rik|C76415|RBP7|Rpo2-7l polymerase (RNA) II (DNA directed) polypeptide G protein-coding common_peak1_71_505_-0.025083590448931_8.97045177946984_0.314899827074295-2 chr7 127392674 127393675 + 0.314899827074295 NA intron (NM_198011, intron 1 of 2) CpG 447 NM_198011 101604 Mm.334241 NM_198011 ENSMUSG00000078580 E430018J23Rik AI480612 RIKEN cDNA E430018J23 gene protein-coding common_peak2_321_3143_-0.00977627771326794_11.613497363402_0.314891956063249 chr18 4346152 4354421 + 0.314891956063249 NA intron (NM_007746, intron 1 of 7) intron (NM_007746, intron 1 of 7) 2667 NM_007746 26410 Mm.3275 NM_007746 ENSMUSG00000024235 Map3k8 Cot|Cot/Tpl2|Est|Estf|Tpl-2|Tpl2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding common_peak2_44_285_-0.0336926992137574_8.14302498717151_0.314890719303256 chr17 11538271 11539822 + 0.314890719303256 NA intron (NM_016694, intron 6 of 11) intron (NM_016694, intron 6 of 11) 344143 NR_045808 52027 Mm.442257 NR_045808 D17Ertd648e - DNA segment, Chr 17, ERATO Doi 648, expressed ncRNA common_peak2_140_1122_0.0141233911787015_10.14020390799_0.314890523212435 chr15 99473437 99475289 + 0.314890523212435 NA intron (NM_029236, intron 1 of 1) intron (NM_029236, intron 1 of 1) 367 NM_029236 75284 Mm.32826 NM_029236 ENSMUSG00000037525 Bcdin3d 4930556P03Rik|AV138748 BCDIN3 domain containing protein-coding common_peak1_160_1321_0.0134904518512862_10.3752516874333_0.314852229320994 chr11 17952781 17954126 + 0.314852229320994 NA promoter-TSS (NR_131915) promoter-TSS (NR_131915) 422 NM_026576 68145 Mm.178684 NM_026576 ENSMUSG00000016984 Etaa1 5730466H23Rik|AA672646 Ewing tumor-associated antigen 1 protein-coding common_peak1_45_281_0.0255217628810716_8.15231223383933_0.314793104929848-2 chr3 89458967 89459793 + 0.314793104929848 NA promoter-TSS (NM_027348) promoter-TSS (NM_027348) -191 NM_027348 68603 Mm.34242 NM_026784 ENSMUSG00000027952 Pmvk 1110011E12Rik|2900002L22Rik|AV001327|PMK|PMKA|PMKASE phosphomevalonate kinase protein-coding common_peak1_45_281_0.0255217628810716_8.15231223383933_0.314793104929848 chr10 77517646 77518485 + 0.314793104929848 NA Intergenic Intergenic -2252 NM_133998 108707 Mm.259547 NM_133998 ENSMUSG00000032977 Fam207a 1810008A18Rik|AI303072 family with sequence similarity 207, member A protein-coding common_peak2_121_961_-0.0187613215367133_9.90051242300169_0.314779321279897 chrX 41910184 41912707 + 0.314779321279897 NA intron (NM_001033422, intron 1 of 38) CpG 456 NM_001033422 331401 Mm.259498 NM_001033422 ENSMUSG00000037475 Thoc2 6330441O12Rik|D130005M13Rik|Gm1139|Gm1793|Tho2 THO complex 2 protein-coding common_peak2_88_636_0.017868806507888_9.32408396551024_0.314760730419717 chr9 72960890 72962779 + 0.314760730419717 NA intron (NM_026314, intron 3 of 8) intron (NM_026314, intron 3 of 8) 3049 NM_001163725 67685 Mm.31817 NM_026314 ENSMUSG00000089865 Dyx1c1 1700010I24Rik|Dnaaf4|EKN1|b2b811.1Clo|b2b811Clo dyslexia susceptibility 1 candidate 1 protein-coding common_peak1_161_1332_0.0124933290902618_10.3867077296341_0.314738635172218 chr14 61647028 61648913 + 0.314738635172218 NA intron (NR_028264, intron 1 of 6) CpG -15860 NR_029733 387174 NR_029733 ENSMUSG00000093007 Mir15a Mirn15a|mir-15a|mmu-mir-15a microRNA 15a ncRNA common_peak1_23_125_0.036495544592178_6.99552769579601_0.314709127461154-3 chrX 50873592 50874054 + 0.314709127461154 NA intron (NM_001313744, intron 3 of 11) intron (NM_001313744, intron 3 of 11) 32452 NM_001313744 70415 Mm.46254 NM_133729 ENSMUSG00000031112 Stk26 2610018G03Rik|Mst4 serine/threonine kinase 26 protein-coding common_peak1_23_125_0.036495544592178_6.99552769579601_0.314709127461154-2 chr3 135579497 135580137 + 0.314709127461154 NA Intergenic Intergenic 94206 NM_027288 110173 Mm.280536 NM_027288 ENSMUSG00000028164 Manba 2410030O07Rik|B930014J03Rik|Bmn mannosidase, beta A, lysosomal protein-coding common_peak1_23_125_0.036495544592178_6.99552769579601_0.314709127461154 chr10 116564820 116565344 + 0.314709127461154 NA intron (NR_024327, intron 1 of 13) intron (NR_024327, intron 1 of 13) 16429 NM_001037848 72068 Mm.351553 NM_028082 ENSMUSG00000020166 Cnot2 2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650 CCR4-NOT transcription complex, subunit 2 protein-coding unique_peak2_23_125_0.036495544592178_6.99552769579601_0.314709127461154 chr13 45156138 45157206 + 0.314709127461154 NA Intergenic Intergenic -154576 NM_025772 94245 Mm.352311 NM_025772 ENSMUSG00000057531 Dtnbp1 5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy dystrobrevin binding protein 1 protein-coding common_peak1_14_70_0.0322970019066657_6.16589562045801_0.314697607900733 chr10 41714220 41714631 + 0.314697607900733 NA Intergenic RLTR25B|LTR|ERVK 95238 NM_001243075 103268 Mm.338605 NM_026643 ENSMUSG00000019813 Cep57l1 2410017P07Rik|4930484D11Rik|AI607327|cep57R centrosomal protein 57-like 1 protein-coding common_peak1_14_70_0.0322970019066657_6.16589562045801_0.314697607900733-2 chr17 32051957 32052359 + 0.314697607900733 NA intron (NM_001163734, intron 5 of 12) B4|SINE|B4 3873 NM_001163734 72462 Mm.102761 NM_028244 ENSMUSG00000058392 Rrp1b 2600005C20Rik|D030064A17|Kiaa0179|mKIAA0179 ribosomal RNA processing 1 homolog B (S. cerevisiae) protein-coding unique_peak2_14_70_0.0322970019066657_6.16589562045801_0.314697607900733-2 chr5 107700907 107701532 + 0.314697607900733 NA intron (NR_045871, intron 2 of 2) intron (NR_045871, intron 2 of 2) 2261 NR_045871 654809 Mm.399159 NR_045871 ENSMUSG00000106333 4930428O21Rik - RIKEN cDNA 4930428O21 gene ncRNA common_peak1_14_70_0.0322970019066657_6.16589562045801_0.314697607900733-3 chr7 6363354 6363725 + 0.314697607900733 NA intron (NM_177888, intron 1 of 4) intron (NM_177888, intron 1 of 4) 231 NM_001112805 330463 Mm.136456 NM_177888 ENSMUSG00000055150 Zfp78 A330079D15|KRAB12|Zfp77 zinc finger protein 78 protein-coding unique_peak2_14_70_0.0322970019066657_6.16589562045801_0.314697607900733 chr2 17740981 17741604 + 0.314697607900733 NA Intergenic PB1D10|SINE|Alu -10224 NM_028757 74103 Mm.120298 NM_028757 ENSMUSG00000053702 Nebl 1200007O21Rik|A630080F05Rik|BB140644|D830029A09Rik|Lnebl nebulette protein-coding common_peak1_73_506_0.020554025394425_8.99611894970055_0.314655060278932 chr13 49243080 49243747 + 0.314655060278932 NA intron (NM_028340, intron 1 of 4) intron (NM_028340, intron 1 of 4) 4750 NM_025491 66329 Mm.34308 NM_025491 ENSMUSG00000021384 Susd3 1700017I11Rik|2810440J20Rik sushi domain containing 3 protein-coding common_peak2_226_2050_-0.0121670294921206_10.9960282617338_0.314641610719414 chr16 19979477 19984079 + 0.314641610719414 NA intron (NM_183390, intron 1 of 6) intron (NM_183390, intron 1 of 6) 1271 NM_183390 239743 Mm.86699 NM_183390 ENSMUSG00000043008 Klhl6 - kelch-like 6 protein-coding common_peak1_141_1156_-0.0164012920741161_10.1679725030704_0.314625362865134 chr9 90265660 90266971 + 0.314625362865134 NA intron (NM_194334, intron 1 of 12) intron (NM_194334, intron 1 of 12) 4454 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding unique_peak2_58_397_-0.0310982155018245_8.62107551279274_0.314550141925002 chr9 33010223 33012376 + 0.314550141925002 NA Intergenic Intergenic -82333 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak1_184_1568_0.0122596011216327_10.6217594375289_0.314541424028626 chr7 16294684 16296017 + 0.314541424028626 NA Intergenic Intergenic -8555 NM_001136471 243846 Mm.482401 NM_172297 ENSMUSG00000041375 Ccdc9 2600011L02Rik coiled-coil domain containing 9 protein-coding common_peak1_124_967_0.0152575417401088_9.92649200814465_0.314538970586796 chr11 106032961 106034421 + 0.314538970586796 NA intron (NM_001037712, intron 12 of 12) (CA)n|Simple_repeat|Simple_repeat -3181 NM_027946 71833 Mm.307455 NM_027946 ENSMUSG00000049354 Dcaf7 1700012F10Rik|2610037L01Rik|C86529|HAN11|Wdr68 DDB1 and CUL4 associated factor 7 protein-coding common_peak1_45_293_-0.0345992295564983_8.18237273005811_0.314508340679385 chr4 148448512 148449178 + 0.314508340679385 NA intron (NM_020009, intron 1 of 57) CpG 263 NM_020009 56717 Mm.21158 NM_020009 ENSMUSG00000028991 Mtor 2610315D21Rik|AI327068|FRAP|FRAP2|Frap1|RAFT1|RAPT1|flat mechanistic target of rapamycin (serine/threonine kinase) protein-coding common_peak2_45_293_-0.0345992295564983_8.18237273005811_0.314508340679385 chr16 78531497 78532973 + 0.314508340679385 NA Intergenic Intergenic -28081 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak1_205_1820_-0.0123550120137406_10.82433770097_0.314508138737796 chr11 53857943 53860038 + 0.314508138737796 NA intron (NR_033332, intron 1 of 3) intron (NR_033332, intron 1 of 3) 266 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA common_peak2_34_200_0.0303940233446056_7.66624870285123_0.314434486861532 chr1 64949484 64950490 + 0.314434486861532 NA intron (NM_001039493, intron 1 of 7) intron (NM_001039493, intron 1 of 7) 6837 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak1_46_289_0.023221997411083_8.19152008872048_0.314416019988276 chr16 78547562 78548585 + 0.314416019988276 NA exon (NM_001252440, exon 3 of 5) exon (NM_001252440, exon 3 of 5) -12243 NR_040569 75818 Mm.410817 NR_040569 4930478L05Rik - RIKEN cDNA 4930478L05 gene ncRNA common_peak1_163_1378_-0.0147388540758424_10.4220373144761_0.314408785712269 chr2 165991929 165993799 + 0.314408785712269 NA intron (NM_008679, intron 1 of 22) CpG 227 NM_008679 17979 Mm.469663 NM_008679 ENSMUSG00000027678 Ncoa3 2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip nuclear receptor coactivator 3 protein-coding common_peak2_143_1176_-0.0163763096067093_10.1927104502351_0.314392961369924 chr5 24444233 24446140 + 0.314392961369924 NA promoter-TSS (NM_023229) promoter-TSS (NM_023229) 49 NM_023229 66587 Mm.28123 NM_023229 ENSMUSG00000028959 Fastk 0610011K02Rik|610011K02Rik Fas-activated serine/threonine kinase protein-coding common_peak1_90_654_0.0169939462952353_9.36384806957243_0.314385396893578 chr14 106025849 106026958 + 0.314385396893578 NA Intergenic Lx7|LINE|L1 -79795 NM_198601 212085 Mm.78128 NM_198601 ENSMUSG00000022113 Trim52 4921513B05Rik tripartite motif-containing 52 protein-coding common_peak1_23_133_-0.0523137223656773_7.03993232927493_0.314291411079304-2 chrX 105928097 105928539 + 0.314291411079304 NA intron (NM_009530, intron 1 of 34) CpG 1054 NM_009530 22589 Mm.10141 NM_009530 ENSMUSG00000031229 Atrx 4833408C14Rik|AI447451|ATR2|DXHXS6677E|HP1-BP38|Hp1bp2|Hp1bp38|MRXS3|RAD54L|Rad54|XH2|Xnp|ZNF-HX alpha thalassemia/mental retardation syndrome X-linked protein-coding common_peak1_23_133_-0.0523137223656773_7.03993232927493_0.314291411079304 chr14 29957926 29958501 + 0.314291411079304 NA Intergenic RMER17A2|LTR|ERVK -10167 NM_019979 80795 Mm.104491 NM_019979 ENSMUSG00000042682 Selenok 1110001C03Rik|AA673253|HSPC030|Hsp30|Selk selenoprotein K protein-coding common_peak2_23_133_-0.0523137223656773_7.03993232927493_0.314291411079304 chr5 147448363 147449207 + 0.314291411079304 NA intron (NM_028291, intron 1 of 18) intron (NM_028291, intron 1 of 18) 18205 NM_028291 72587 Mm.320469 NM_028291 ENSMUSG00000029647 Pan3 2700050F09Rik|A430027N15Rik|AU014670 PAN3 poly(A) specific ribonuclease subunit protein-coding common_peak2_59_405_-0.0300671734011164_8.65030233048462_0.31428074232854 chr1 194879550 194880381 + 0.31428074232854 NA Intergenic Intergenic -58856 NM_133654 12490 Mm.29798 NM_133654 ENSMUSG00000016494 Cd34 AU040960 CD34 antigen protein-coding common_peak2_59_405_-0.0300671734011164_8.65030233048462_0.31428074232854-2 chr6 97204688 97206363 + 0.31428074232854 NA intron (NM_011666, intron 1 of 17) CpG 122 NM_001301858 22200 Mm.277626 NM_011666 ENSMUSG00000030061 Uba3 A830034N06Rik|AI256736|AI848246|AW546539|Ube1c ubiquitin-like modifier activating enzyme 3 protein-coding common_peak1_59_405_-0.0300671734011164_8.65030233048462_0.31428074232854 chr16 91458252 91459337 + 0.31428074232854 NA Intergenic (TTTC)n|Simple_repeat|Simple_repeat -6310 NR_077219 100503120 Mm.387130 NR_077219 ENSMUSG00000084866 A930006K02Rik - RIKEN cDNA A930006K02 gene ncRNA common_peak1_125_999_-0.0175628135239485_9.95700287790011_0.314253423124735 chr13 74493390 74494938 + 0.314253423124735 NA promoter-TSS (NM_146231) promoter-TSS (NM_146231) -214 NM_146231 235956 Mm.296909 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak1_60_399_0.0206632612722473_8.65418782041085_0.314247820387906 chr14 19823059 19823949 + 0.314247820387906 NA intron (NM_026528, intron 1 of 7) CpG 319 NM_026528 68045 Mm.21932 NM_026528 ENSMUSG00000021807 2700060E02Rik - RIKEN cDNA 2700060E02 gene protein-coding common_peak2_75_523_0.0201658242321532_9.04350591365353_0.314215533484207 chr6 83032668 83034181 + 0.314215533484207 NA promoter-TSS (NM_013586) promoter-TSS (NM_013586) 47 NM_010070 13448 Mm.156 NM_010070 ENSMUSG00000068335 Dok1 AW557123|p62DOK docking protein 1 protein-coding unique_peak2_14_76_-0.0847424192835531_6.22441533105312_0.31414715830176-2 chr15 36666189 36666966 + 0.31414715830176 NA Intergenic Intergenic -57604 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding unique_peak2_14_76_-0.0847424192835531_6.22441533105312_0.31414715830176 chr12 115312158 115312783 + 0.31414715830176 NA Intergenic Intergenic 383324 NR_105810 102465205 NR_105810 ENSMUSG00000098336 Mir6388 Gm27925|mmu-mir-6388 microRNA 6388 ncRNA common_peak1_14_76_-0.0847424192835531_6.22441533105312_0.31414715830176 chr1 52802468 52802852 + 0.31414715830176 NA intron (NM_008384, intron 1 of 5) intron (NM_008384, intron 1 of 5) 15028 NM_008384 16329 Mm.917 NM_008384 ENSMUSG00000026102 Inpp1 2300002C06Rik|AV137389 inositol polyphosphate-1-phosphatase protein-coding common_peak1_14_76_-0.0847424192835531_6.22441533105312_0.31414715830176-3 chr2 72475857 72476266 + 0.31414715830176 NA promoter-TSS (NM_025866) promoter-TSS (NM_025866) -158 NM_025866 66953 Mm.270676 NM_025866 ENSMUSG00000055612 Cdca7 2310021G01Rik|AU044109|JPO1 cell division cycle associated 7 protein-coding unique_peak2_14_76_-0.0847424192835531_6.22441533105312_0.31414715830176-3 chr18 54987666 54988397 + 0.31414715830176 NA exon (NM_175751, exon 2 of 10) exon (NM_175751, exon 2 of 10) 2149 NM_175751 269023 Mm.192984 NM_175751 ENSMUSG00000052713 Zfp608 4932417D18Rik|D430007A19Rik|Znf608 zinc finger protein 608 protein-coding common_peak1_14_76_-0.0847424192835531_6.22441533105312_0.31414715830176-4 chr6 113623543 113623872 + 0.31414715830176 NA promoter-TSS (NM_009507) promoter-TSS (NM_009507) -314 NM_009507 22346 Mm.29407 NM_009507 ENSMUSG00000033933 Vhl Vhlh von Hippel-Lindau tumor suppressor protein-coding common_peak1_14_76_-0.0847424192835531_6.22441533105312_0.31414715830176-2 chr13 12394656 12395052 + 0.31414715830176 NA promoter-TSS (NM_144835) promoter-TSS (NM_144835) -521 NM_144835 217995 Mm.171186 NM_144835 ENSMUSG00000050244 Heatr1 AA517551|B130016L12Rik|BC019693 HEAT repeat containing 1 protein-coding common_peak2_126_1009_-0.0179288834651121_9.9711751359066_0.314121648729661 chr9 58248328 58250398 + 0.314121648729661 NA intron (NM_001311088, intron 1 of 8) intron (NM_001311088, intron 1 of 8) 423 NM_178087 18854 Mm.392123 NM_008884 ENSMUSG00000036986 Pml 1200009E24Rik|AI661194|Trim19 promyelocytic leukemia protein-coding common_peak1_34_210_-0.0396534741836518_7.70127245161536_0.314111471250536 chr7 104299963 104300708 + 0.314111471250536 NA 3' UTR (NM_023835, exon 8 of 8) 3' UTR (NM_023835, exon 8 of 8) -12229 NM_001310602 667823 Mm.482375 NM_001310602 ENSMUSG00000060441 Trim5 EG667823|Gm8833 tripartite motif-containing 5 protein-coding unique_peak2_34_210_-0.0396534741836518_7.70127245161536_0.314111471250536 chr1 36813637 36814993 + 0.314111471250536 NA intron (NM_018872, intron 25 of 40) intron (NM_018872, intron 25 of 40) 35331 NM_001289612 22637 Mm.8038 NM_009539 ENSMUSG00000026117 Zap70 Srk|ZAP-70|mrtle|mur zeta-chain (TCR) associated protein kinase protein-coding unique_peak2_34_210_-0.0396534741836518_7.70127245161536_0.314111471250536-2 chr6 54090404 54091675 + 0.314111471250536 NA intron (NM_001163640, intron 1 of 12) LTR67B|LTR|ERVL 51107 NM_001163640 69993 Mm.321147 NM_023543 ENSMUSG00000004633 Chn2 1700026N20Rik|4930557O16Rik|ARHGAP3|Bch chimerin 2 protein-coding common_peak2_34_210_-0.0396534741836518_7.70127245161536_0.314111471250536 chr8 129262947 129264091 + 0.314111471250536 NA Intergenic Intergenic -29473 NM_153780 72139 Mm.426514 NM_153780 ENSMUSG00000071302 2610044O15Rik8 2610044O15Rik RIKEN cDNA 2610044O15 gene protein-coding common_peak2_108_837_-0.0190641981697155_9.70127433461449_0.314079788213744 chr19 16779971 16781925 + 0.314079788213744 NA promoter-TSS (NM_173028) promoter-TSS (NM_173028) -15 NM_173028 271564 Mm.211963 NM_173028 ENSMUSG00000046230 Vps13a 4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986 vacuolar protein sorting 13A protein-coding common_peak1_91_681_-0.02194250255795_9.4026566777452_0.314030037223721-2 chr4 43957340 43958829 + 0.314030037223721 NA intron (NM_027450, intron 1 of 4) intron (NM_027450, intron 1 of 4) 382 NM_027450 384009 Mm.22213 NM_027450 ENSMUSG00000028480 Glipr2 5730414A08Rik|C77180|GAPR-1 GLI pathogenesis-related 2 protein-coding common_peak1_91_681_-0.02194250255795_9.4026566777452_0.314030037223721 chr1 120120451 120121941 + 0.314030037223721 NA promoter-TSS (NM_007830) promoter-TSS (NM_007830) 9 NM_001172074 73103 Mm.271602 NM_028439 ENSMUSG00000026388 3110009E18Rik - RIKEN cDNA 3110009E18 gene protein-coding common_peak2_24_132_0.030732756635194_7.07064881381879_0.313994491417285 chr18 57970169 57970909 + 0.313994491417285 NA Intergenic Intergenic 91861 NM_009194 20496 Mm.399997 NM_009194 ENSMUSG00000024597 Slc12a2 9330166H04Rik|Nkcc1|mBSC2|sy-ns solute carrier family 12, member 2 protein-coding common_peak1_24_132_0.030732756635194_7.07064881381879_0.313994491417285 chr8 70172205 70172724 + 0.313994491417285 NA promoter-TSS (NR_122028) promoter-TSS (NR_122028) 56 NR_122028 234371 Mm.23488 NM_145597 ENSMUSG00000002342 Tmem161a AI428876|BB161850|BC021367 transmembrane protein 161A protein-coding common_peak2_76_532_0.01872981801389_9.06735663176612_0.313994130383252 chr3 123385307 123386638 + 0.313994130383252 NA promoter-TSS (NM_201638) promoter-TSS (NM_201638) 18 NM_201638 210529 Mm.260039 NM_201638 ENSMUSG00000028114 Mettl14 G430022H21Rik|mKIAA1627 methyltransferase like 14 protein-coding common_peak2_61_407_0.0208691739491673_8.68285992894608_0.313990219448163 chr19 44145737 44147017 + 0.313990219448163 NA promoter-TSS (NM_028607) promoter-TSS (NM_028607) 69 NM_028607 73689 Mm.124685 NM_028607 ENSMUSG00000057506 Bloc1s2 2410089B13Rik|BLOS2|Bloc1s2a biogenesis of lysosomal organelles complex-1, subunit 2 protein-coding common_peak1_189_1649_-0.01316820767161_10.6816662052974_0.313990101675964 chr12 11265171 11267028 + 0.313990101675964 NA promoter-TSS (NM_177331) promoter-TSS (NM_177331) 213 NM_025695 67241 Mm.173953 NM_025695 ENSMUSG00000020608 Smc6 2810489L22Rik|3830418C19Rik|AA990493|AU018782|AW742439|SMC-6|Smc6l1|mKIAA4103 structural maintenance of chromosomes 6 protein-coding common_peak1_35_207_0.0308579549179315_7.71586869560006_0.313986582471589-3 chr11 87638991 87639401 + 0.313986582471589 NA intron (NM_001045527, intron 5 of 5) intron (NM_001045527, intron 5 of 5) 22032 NM_001045527 327992 Mm.390371 NM_001045527 ENSMUSG00000070345 Hsf5 Gm739|MLZ-220 heat shock transcription factor family member 5 protein-coding common_peak1_35_207_0.0308579549179315_7.71586869560006_0.313986582471589-2 chr10 88417938 88418677 + 0.313986582471589 NA intron (NM_001004164, intron 5 of 20) B1F1|SINE|Alu 38895 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak1_35_207_0.0308579549179315_7.71586869560006_0.313986582471589 chr10 17511781 17512380 + 0.313986582471589 NA Intergenic Intergenic -211148 NM_010828 17684 Mm.272321 NM_010828 ENSMUSG00000039910 Cited2 AI835299|ER154-like|Mrg1|Msg2|p35srj Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 protein-coding common_peak1_129_1016_0.0134228676617525_9.99681539768838_0.313890956558278 chr11 74573854 74576119 + 0.313890956558278 NA intron (NM_001015046, intron 1 of 24) intron (NM_001015046, intron 1 of 24) 15172 NM_001015046 380711 Mm.425690 NM_001015046 ENSMUSG00000038807 Rap1gap2 AU067654|Garnl4|Gm1561|mKIAA1039 RAP1 GTPase activating protein 2 protein-coding common_peak2_92_690_-0.0217251795006685_9.42167931063792_0.313859355872743 chr10 12921507 12923739 + 0.313859355872743 NA non-coding (NR_038028, exon 1 of 3) non-coding (NR_038028, exon 1 of 3) 504 NR_038027 320273 Mm.417706 NR_038027 ENSMUSG00000097378 B230208H11Rik - RIKEN cDNA B230208H11 gene ncRNA common_peak1_93_681_0.0161154695882022_9.42168566381827_0.313859355872743 chr19 41895148 41896235 + 0.313859355872743 NA intron (NM_199447, intron 1 of 33) ID4|SINE|ID 462 NM_199447 107094 Mm.276044 NM_199447 ENSMUSG00000035049 Rrp12 AA408556|AA536972|mKIAA0690 ribosomal RNA processing 12 homolog (S. cerevisiae) protein-coding common_peak1_47_308_-0.0310752486259229_8.25592540359141_0.313845449320901 chr11 83964285 83965053 + 0.313845449320901 NA intron (NM_194341, intron 1 of 19) CpG 238 NM_194341 217030 Mm.82680 NM_194341 ENSMUSG00000034940 Synrg Ap1gbp1|SYNG synergin, gamma protein-coding common_peak1_264_2442_0.00940920405417778_11.2591427502943_0.31383466379068 chr14 55642895 55644810 + 0.31383466379068 NA promoter-TSS (NM_028780) promoter-TSS (NM_028780) -46 NM_028780 74140 Mm.132857 NM_028780 ENSMUSG00000002320 Tm9sf1 1200014D02Rik|AI893436|MP70 transmembrane 9 superfamily member 1 protein-coding common_peak2_110_856_-0.0192332267478044_9.7335347807386_0.313788426352252 chr17 29346528 29348644 + 0.313788426352252 NA exon (NM_019880, exon 1 of 12) exon (NM_019880, exon 1 of 12) 318 NM_019880 56462 Mm.285322 NM_019880 ENSMUSG00000024012 Mtch1 2310034O17Rik|AI255158|AU018396|C77849|PSAP mitochondrial carrier 1 protein-coding common_peak2_77_541_0.0174067194403467_9.09085240107405_0.313780039877915 chr2 105903864 105905433 + 0.313780039877915 NA promoter-TSS (NM_028260) promoter-TSS (NM_028260) 10 NM_028260 66541 Mm.272253 NM_028260 ENSMUSG00000042670 Immp1l 1500034J20Rik|2610528O17Rik|AU042386 IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) protein-coding common_peak2_240_2173_0.00971527022734087_11.090993860141_0.313774108075598 chr3 152395027 152397493 + 0.313774108075598 NA promoter-TSS (NM_001287139) promoter-TSS (NM_001287139) 257 NM_001080755 108946 Mm.379292 NM_198416 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 protein-coding common_peak2_48_304_0.0242108044604361_8.26477083468047_0.313761958357247-2 chr2 27426133 27427753 + 0.313761958357247 NA promoter-TSS (NM_009500) promoter-TSS (NM_009500) -118 NM_009500 22325 Mm.179011 NM_009500 ENSMUSG00000009621 Vav2 2810040F13Rik|AI847175|Vav-2 vav 2 oncogene protein-coding common_peak2_48_304_0.0242108044604361_8.26477083468047_0.313761958357247 chr15 101468724 101470263 + 0.313761958357247 NA intron (NM_016879, intron 6 of 9) (TG)n|Simple_repeat|Simple_repeat -3985 NM_010667 16679 Mm.383183 NM_010667 ENSMUSG00000067614 Krt86 5430421N21Rik|AI325212|Khb4|Krt2-10|Krt2-11|MHb4 keratin 86 protein-coding common_peak1_129_1038_-0.0174531073849593_10.0122533852117_0.313753937754539 chr9 32939639 32941613 + 0.313753937754539 NA Intergenic Intergenic -11660 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak2_94_690_0.015927889886953_9.44050584533174_0.313693098322652 chr17 37045379 37047552 + 0.313693098322652 NA intron (NM_019439, intron 1 of 22) CpG 499 NM_019439 54393 Mm.32191 NM_019439 ENSMUSG00000024462 Gabbr1 GABAB1|GABAbR1|bM573K1.1 gamma-aminobutyric acid (GABA) B receptor, 1 protein-coding common_peak1_35_217_-0.0368866517179027_7.74974099891798_0.313684550291537 chr15 31453679 31454283 + 0.313684550291537 NA promoter-TSS (NM_145852) promoter-TSS (NM_145852) -292 NM_145852 252967 Mm.436668 NM_145852 ENSMUSG00000022236 Ropn1l ASP|AV047578|Akapasp ropporin 1-like protein-coding common_peak1_35_217_-0.0368866517179027_7.74974099891798_0.313684550291537-3 chr2 167319267 167319941 + 0.313684550291537 NA intron (NM_019835, intron 1 of 8) B4A|SINE|B4 29574 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak2_35_217_-0.0368866517179027_7.74974099891798_0.313684550291537 chr7 38188814 38190171 + 0.313684550291537 NA intron (NM_001085385, intron 2 of 3) MTD|LTR|ERVL-MaLR 5705 NM_028166 72244 Mm.187554 NM_028166 1600014C10Rik AI428873 RIKEN cDNA 1600014C10 gene protein-coding common_peak1_35_217_-0.0368866517179027_7.74974099891798_0.313684550291537-2 chr2 51933844 51934426 + 0.313684550291537 NA intron (NM_030243, intron 1 of 4) intron (NM_030243, intron 1 of 4) 509 NM_001141982 71684 Mm.28309 NM_030243 ENSMUSG00000036249 Rbm43 0610033I05Rik RNA binding motif protein 43 protein-coding common_peak2_151_1232_0.0122440525531182_10.2740791106794_0.313658963802927-2 chr11 87425290 87428118 + 0.313658963802927 NA promoter-TSS (NM_001199293) promoter-TSS (NM_001199293) -887 NM_001199293 83560 Mm.440758 NM_031386 ENSMUSG00000010342 Tex14 C85585 testis expressed gene 14 protein-coding common_peak2_151_1232_0.0122440525531182_10.2740791106794_0.313658963802927 chr11 5881469 5884054 + 0.313658963802927 NA Intergenic Intergenic -4505 NM_008894 18972 Mm.35788 NM_008894 ENSMUSG00000020471 Pold2 50kDa|p50|po1D2 polymerase (DNA directed), delta 2, regulatory subunit protein-coding common_peak1_15_76_0.0294667224302669_6.28151990191003_0.313639332470866 chr8 70864239 70864651 + 0.313639332470866 NA Intergenic Intergenic -7437 NM_032397 84036 Mm.32074 NM_032397 ENSMUSG00000002908 Kcnn1 AI854248|KCa2.1|SK1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 protein-coding unique_peak2_15_76_0.0294667224302669_6.28151990191003_0.313639332470866-2 chr2 12424032 12424725 + 0.313639332470866 NA Intergenic Lx9|LINE|L1 -4918 NM_024185 66960 Mm.34059 NM_024185 ENSMUSG00000026767 Fam188a 1810041E18Rik|2310047O13Rik|5830410F13Rik|AI447827|AW111958 family with sequence similarity 188, member A protein-coding unique_peak2_15_76_0.0294667224302669_6.28151990191003_0.313639332470866 chr17 9775469 9776229 + 0.313639332470866 NA promoter-TSS (NR_045433) promoter-TSS (NR_045433) 17 NR_045433 71092 Mm.243827 NR_045433 4930452A19Rik 4933424P20Rik RIKEN cDNA 4930452A19 gene ncRNA unique_peak2_15_76_0.0294667224302669_6.28151990191003_0.313639332470866-3 chr3 105755986 105756719 + 0.313639332470866 NA intron (NM_145541, intron 1 of 7) intron (NM_145541, intron 1 of 7) 45029 NM_145541 109905 Mm.101922 NM_145541 ENSMUSG00000068798 Rap1a AI848598|G-22K|Krev-1|Rap1 RAS-related protein-1a protein-coding unique_peak2_15_76_0.0294667224302669_6.28151990191003_0.313639332470866-4 chr9 109046096 109047045 + 0.313639332470866 NA intron (NM_025858, intron 2 of 5) intron (NM_025858, intron 2 of 5) 8003 NM_001284332 66940 Mm.196533 NM_025858 ENSMUSG00000025647 Shisa5 2310008D10Rik|6430628I05Rik|Scotin|mShisa5 shisa family member 5 protein-coding unique_peak2_24_140_-0.0535361602624098_7.11278327226759_0.313618682225665 chr6 129606522 129607606 + 0.313618682225665 NA Intergenic RSINE1|SINE|B4 15253 NM_010654 16643 Mm.391515 NM_010654 ENSMUSG00000030165 Klrd1 CD94 killer cell lectin-like receptor, subfamily D, member 1 protein-coding common_peak2_24_140_-0.0535361602624098_7.11278327226759_0.313618682225665 chr7 114081335 114082211 + 0.313618682225665 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 36008 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding unique_peak2_24_140_-0.0535361602624098_7.11278327226759_0.313618682225665-2 chr7 49088033 49089253 + 0.313618682225665 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) 129570 NM_001111016 78286 Mm.333881 NM_175272 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 protein-coding common_peak2_241_2216_-0.0112138990455026_11.1087861053446_0.313618269058133 chr15 79954531 79959550 + 0.313618269058133 NA Intergenic Intergenic -24394 NM_144811 52609 Mm.323442 NM_144811 ENSMUSG00000053411 Cbx7 1600014J01Rik|AI851678|D15Ertd417e chromobox 7 protein-coding common_peak1_78_549_0.0188112827012947_9.11269344976267_0.313595587535035 chr1 43521228 43522146 + 0.313595587535035 NA intron (NM_010879, intron 2 of 4) intron (NM_010879, intron 2 of 4) 75936 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding common_peak1_172_1470_-0.0133709997622802_10.5158960313737_0.313567749123151 chr2 29124989 29126092 + 0.313567749123151 NA 5' UTR (NM_198033, exon 1 of 26) 5' UTR (NM_198033, exon 1 of 26) 548 NM_198033 269254 Mm.41867 NM_198033 ENSMUSG00000043535 Setx A130090N03|A930037J23Rik|AOA2|AW060766|Als4|SCAR1|Sen1|mKIAA0625 senataxin protein-coding common_peak1_196_1695_0.011186162062101_10.7335135355942_0.313533221051272 chr7 141171969 141173722 + 0.313533221051272 NA promoter-TSS (NM_001172100) promoter-TSS (NM_001172100) 6 NM_001172100 107702 Mm.197493 NM_145135 ENSMUSG00000038650 Rnh1 AW546468|C80305|RNH ribonuclease/angiogenin inhibitor 1 protein-coding unique_peak2_48_316_-0.031462793228723_8.29260763352505_0.313517887627483 chrX 140537079 140539701 + 0.313517887627483 NA Intergenic Intergenic 4278 NR_122039 14605 Mm.22216 NM_010286 ENSMUSG00000031431 Tsc22d3 DIP|Dsip1|Gilz|TSC-22R|Tilz3 TSC22 domain family, member 3 protein-coding common_peak2_36_215_0.024896149047942_7.76733557668744_0.313509996968966 chr15 85832241 85832953 + 0.313509996968966 NA intron (NM_001033337, intron 1 of 13) intron (NM_001033337, intron 1 of 13) 293 NM_001033337 239570 Mm.151748 NM_001033337 ENSMUSG00000035944 Ttc38 9030019H09 tetratricopeptide repeat domain 38 protein-coding common_peak2_322_3154_-0.00932784387859265_11.6187603679306_0.313494659877906 chr1 97658731 97663091 + 0.313494659877906 NA intron (NM_133825, intron 1 of 2) CpG 1107 NM_133825 52392 Mm.12309 NM_133825 ENSMUSG00000044768 D1Ertd622e AI987691|AW047450 DNA segment, Chr 1, ERATO Doi 622, expressed protein-coding common_peak1_197_1706_0.0108194319727826_10.7426570590141_0.313452931354319 chr12 118301559 118302838 + 0.313452931354319 NA promoter-TSS (NM_001166385) promoter-TSS (NM_001166385) -758 NM_001166385 20688 Mm.34699 NM_009239 ENSMUSG00000025323 Sp4 5730497N03Rik|HF-1b|HF1-b trans-acting transcription factor 4 protein-coding common_peak1_323_3166_-0.0093344466625993_11.6242339286969_0.313447273081412 chr6 97221019 97224836 + 0.313447273081412 NA intron (NM_022992, intron 1 of 2) intron (NM_022992, intron 1 of 2) 12135 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak2_132_1067_-0.0167956190251939_10.052298122175_0.313406318660197 chr8 122375970 122377682 + 0.313406318660197 NA intron (NM_001310650, intron 1 of 17) CpG 210 NM_001029993 76014 Mm.241489 NM_001029993 ENSMUSG00000017478 Zc3h18 1190001B23Rik|5830416A07Rik|Nhn1 zinc finger CCCH-type containing 18 protein-coding common_peak1_132_1067_-0.0167956190251939_10.052298122175_0.313406318660197 chr2 119046714 119047983 + 0.313406318660197 NA intron (NM_029617, intron 1 of 23) CpG 229 NM_029617 76464 Mm.202518 NM_029617 ENSMUSG00000027326 Knl1 2310043D08Rik|5730505K17Rik|Casc5 kinetochore scaffold 1 protein-coding common_peak1_79_558_0.0176543771602979_9.13553166142334_0.313394355769964 chr19 46862165 46863679 + 0.313394355769964 NA intron (NM_001102471, intron 4 of 6) intron (NM_001102471, intron 4 of 6) 99429 NM_029810 76952 Mm.40965 NM_029810 ENSMUSG00000025041 Nt5c2 2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II 5'-nucleotidase, cytosolic II protein-coding common_peak2_95_717_-0.0208399433582436_9.47742006214393_0.313373184052505 chr6 39376877 39378207 + 0.313373184052505 NA intron (NM_028123, intron 1 of 14) CpG 165 NM_028123 72144 Mm.482167 NM_028123 ENSMUSG00000029924 Slc37a3 2610507O21Rik|AU044904 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 protein-coding common_peak1_25_139_0.0261382276959656_7.14235213079295_0.313350819669882 chr3 116380138 116380524 + 0.313350819669882 NA intron (NM_001080818, intron 4 of 15) intron (NM_001080818, intron 4 of 15) 43701 NM_001080818 229776 Mm.17647 NM_001080818 ENSMUSG00000033502 Cdc14a A830059A17Rik|CDC14A2|CDC14a1|Cdc14 CDC14 cell division cycle 14A protein-coding common_peak2_155_1272_0.0121513680792162_10.320092387941_0.313263687982755 chr1 54869566 54873649 + 0.313263687982755 NA intron (NM_001081433, intron 1 of 27) MTD|LTR|ERVL-MaLR 54780 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_64_432_0.0186913056061719_8.76756886752981_0.313246217650527 chr12 3453000 3454369 + 0.313246217650527 NA intron (NM_172421, intron 3 of 10) PB1D11|SINE|Alu 26827 NM_172421 75302 Mm.120475 NM_172421 ENSMUSG00000037486 Asxl2 4930556B16Rik|mKIAA1685 additional sex combs like 2 (Drosophila) protein-coding common_peak1_36_225_-0.0403953112037776_7.7999813068133_0.313229535563014 chr15 85832130 85832884 + 0.313229535563014 NA intron (NM_001033337, intron 1 of 13) intron (NM_001033337, intron 1 of 13) 203 NM_001033337 239570 Mm.151748 NM_001033337 ENSMUSG00000035944 Ttc38 9030019H09 tetratricopeptide repeat domain 38 protein-coding common_peak2_97_717_0.0156485142739893_9.49566429096005_0.313219212957179 chr2 24918580 24920440 + 0.313219212957179 NA promoter-TSS (NM_001109686) promoter-TSS (NM_001109686) 99 NM_172545 77683 Mm.24176 NM_172545 ENSMUSG00000036893 Ehmt1 9230102N17Rik|D330003E03|Eu-HMTase1|GLP|GLP1|KMT1D|mKIAA1876 euchromatic histone methyltransferase 1 protein-coding common_peak2_49_324_-0.0316684045930753_8.32846170561928_0.313206653728222 chr17 88122772 88124725 + 0.313206653728222 NA Intergenic (TCTG)n|Simple_repeat|Simple_repeat -1764 NM_001190356 225058 Mm.312053 NM_001190356 Gm4832 EG225058 predicted gene 4832 protein-coding common_peak1_80_567_0.0165949634881972_9.15804460124878_0.313199467720949 chr13 5849591 5851075 + 0.313199467720949 NA Intergenic Intergenic 7759 NR_045891 71867 Mm.179181 NR_045891 ENSMUSG00000100625 1700016G22Rik - RIKEN cDNA 1700016G22 gene ncRNA common_peak1_80_567_0.0165949634881972_9.15804460124878_0.313199467720949-2 chr6 120466047 120467472 + 0.313199467720949 NA intron (NM_008359, intron 1 of 12) intron (NM_008359, intron 1 of 12) 3562 NM_008359 16172 Mm.4481 NM_008359 ENSMUSG00000002897 Il17ra AW538159|Cdw217|Il17r|VDw217 interleukin 17 receptor A protein-coding common_peak1_15_82_-0.0787861682217565_6.33564634723605_0.313169363846758-5 chr6 87672467 87672836 + 0.313169363846758 NA promoter-TSS (NM_001170489) promoter-TSS (NM_001170489) -483 NM_001170489 72103 Mm.31770 NM_024251 ENSMUSG00000030051 Aplf 2010301N04Rik|AI452191 aprataxin and PNKP like factor protein-coding common_peak1_15_82_-0.0787861682217565_6.33564634723605_0.313169363846758-4 chr3 98027529 98027865 + 0.313169363846758 NA intron (NM_010928, intron 1 of 33) intron (NM_010928, intron 1 of 33) 14159 NM_010928 18129 Mm.485843 NM_010928 ENSMUSG00000027878 Notch2 AI853703|N2 notch 2 protein-coding common_peak1_15_82_-0.0787861682217565_6.33564634723605_0.313169363846758-3 chr3 51332986 51333431 + 0.313169363846758 NA intron (NM_001291059, intron 1 of 9) L1MB8|LINE|L1 7436 NM_001291059 69257 Mm.131038 NM_023502 ENSMUSG00000037174 Elf2 2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2 E74-like factor 2 protein-coding common_peak1_15_82_-0.0787861682217565_6.33564634723605_0.313169363846758-2 chr11 70439065 70439527 + 0.313169363846758 NA TTS (NR_106064) TTS (NR_106064) 1041 NR_106064 102465670 NR_106064 ENSMUSG00000099109 Mir7115 Gm27902|mmu-mir-7115 microRNA 7115 ncRNA common_peak1_15_82_-0.0787861682217565_6.33564634723605_0.313169363846758 chr10 41385919 41386301 + 0.313169363846758 NA Intergenic L1MEc|LINE|L1 -64248 NM_001277229 268294 Mm.258475 NM_153398 ENSMUSG00000019826 Zbtb24 BC055367|Bif1|Bsg1|ZNF450 zinc finger and BTB domain containing 24 protein-coding unique_peak2_15_82_-0.0787861682217565_6.33564634723605_0.313169363846758 chr4 87974176 87974971 + 0.313169363846758 NA intron (NM_027326, intron 2 of 10) intron (NM_027326, intron 2 of 10) 58834 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak1_155_1296_-0.014794692271126_10.3335654181161_0.313149885369994 chr18 46197987 46199781 + 0.313149885369994 NA promoter-TSS (NM_001170855) promoter-TSS (NM_001170855) -66 NM_001170855 28105 Mm.277382 NM_178872 ENSMUSG00000033949 Trim36 D18Wsu100e|haprin tripartite motif-containing 36 protein-coding common_peak1_50_320_0.021241290005154_8.33705013212488_0.313131254289762 chr11 88107609 88108422 + 0.313131254289762 NA intron (NM_198013, intron 1 of 10) B3|SINE|B2 8869 NM_198013 103841 Mm.374846 NM_198013 ENSMUSG00000018378 Cuedc1 AI841487|C330016O16Rik CUE domain containing 1 protein-coding common_peak1_50_320_0.021241290005154_8.33705013212488_0.313131254289762-2 chr17 25579139 25579906 + 0.313131254289762 NA intron (NR_045520, intron 1 of 8) intron (NR_045520, intron 1 of 8) 348 NR_045520 76483 Mm.12787 NM_029624 ENSMUSG00000002279 Lmf1 2400010G15Rik|AW822050|Tmem112|cld lipase maturation factor 1 protein-coding common_peak1_37_222_0.0260766146629416_7.81393820725178_0.313120849180104 chr11 100397027 100397755 + 0.313120849180104 NA promoter-TSS (NR_132425) promoter-TSS (NR_132425) 399 NM_010593 16480 Mm.299774 NM_010593 ENSMUSG00000001552 Jup Ctnng|D930025P04Rik|PG junction plakoglobin protein-coding common_peak1_37_222_0.0260766146629416_7.81393820725178_0.313120849180104-2 chr19 41282999 41283600 + 0.313120849180104 NA intron (NM_031376, intron 14 of 16) intron (NM_031376, intron 14 of 16) -19295 NM_133352 107358 Mm.246440 NM_133352 ENSMUSG00000025016 Tm9sf3 1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036 transmembrane 9 superfamily member 3 protein-coding common_peak1_81_575_0.0181305748094704_9.17899028884705_0.313031320335495 chr15 73060369 73061514 + 0.313031320335495 NA intron (NM_001164641, intron 1 of 17) CpG 263 NM_001164641 76510 Mm.158902 NM_029640 ENSMUSG00000047921 Trappc9 1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882 trafficking protein particle complex 9 protein-coding common_peak1_25_147_-0.0540321209880181_7.18243730513494_0.313010913006987-4 chr3 14893016 14893678 + 0.313010913006987 NA intron (NM_009801, intron 2 of 6) L1Md_A|LINE|L1 6921 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding common_peak1_25_147_-0.0540321209880181_7.18243730513494_0.313010913006987 chr13 91484430 91485007 + 0.313010913006987 NA intron (NM_024186, intron 1 of 15) intron (NM_024186, intron 1 of 15) 23621 NM_024186 66970 Mm.343095 NM_024186 ENSMUSG00000003992 Ssbp2 1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2 single-stranded DNA binding protein 2 protein-coding common_peak1_25_147_-0.0540321209880181_7.18243730513494_0.313010913006987-5 chr5 139775195 139775757 + 0.313010913006987 NA 5' UTR (NM_026748, exon 1 of 47) 5' UTR (NM_026748, exon 1 of 47) 202 NM_026748 68510 Mm.292942 NM_026748 ENSMUSG00000029547 Ints1 1110015K06Rik integrator complex subunit 1 protein-coding common_peak1_25_147_-0.0540321209880181_7.18243730513494_0.313010913006987-3 chr18 64887477 64888069 + 0.313010913006987 NA promoter-TSS (NM_001114386) promoter-TSS (NM_001114386) 17 NM_001114386 83814 Mm.98668 NM_031881 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like protein-coding common_peak1_25_147_-0.0540321209880181_7.18243730513494_0.313010913006987-6 chr7 28371316 28371938 + 0.313010913006987 NA intron (NM_001083912, intron 1 of 18) CpG 1035 NM_138752 101497 Mm.235700 NM_138752 ENSMUSG00000037552 Plekhg2 AI194308|Clg|Cslg pleckstrin homology domain containing, family G (with RhoGef domain) member 2 protein-coding common_peak1_25_147_-0.0540321209880181_7.18243730513494_0.313010913006987-2 chr16 18626118 18626644 + 0.313010913006987 NA intron (NM_213614, intron 2 of 11) CpG 3557 NM_213614 18951 Mm.20365 NM_213614 ENSMUSG00000072214 Sept5 Cdcrel-1|Cdcrel1|Pnutl1 septin 5 protein-coding common_peak1_180_1528_0.0108346241155566_10.5837900034186_0.312987634461749 chr19 53599937 53601345 + 0.312987634461749 NA intron (NM_007790, intron 1 of 28) CpG 245 NM_007790 13006 Mm.14910 NM_007790 ENSMUSG00000024974 Smc3 Bamacan|Cspg6|HCAP|Mmip1|SMC-3|SmcD structural maintenance of chromosomes 3 protein-coding common_peak1_137_1094_0.0124924769446153_10.1029613929608_0.312978574897382 chr13 49241899 49242948 + 0.312978574897382 NA intron (NM_028340, intron 1 of 4) intron (NM_028340, intron 1 of 4) 5740 NM_025491 66329 Mm.34308 NM_025491 ENSMUSG00000021384 Susd3 1700017I11Rik|2810440J20Rik sushi domain containing 3 protein-coding common_peak2_98_744_-0.0196421515353595_9.53127553958184_0.312922514305425 chr12 31633837 31635490 + 0.312922514305425 NA promoter-TSS (NM_001164090) promoter-TSS (NM_001164090) -5 NM_001164090 12033 Mm.242379 NM_007530 ENSMUSG00000020650 Bcap29 AW208404|Bap29 B cell receptor associated protein 29 protein-coding common_peak2_98_744_-0.0196421515353595_9.53127553958184_0.312922514305425-2 chr8 122550036 122552284 + 0.312922514305425 NA 5' UTR (NM_001037298, exon 1 of 51) 5' UTR (NM_001037298, exon 1 of 51) 169 NM_001037298 234839 Mm.37324 NM_001037298 ENSMUSG00000014444 Piezo1 9630020g22|Fam38a|mKIAA0233 piezo-type mechanosensitive ion channel component 1 protein-coding common_peak2_50_332_-0.0317075899438048_8.36352457209936_0.312910556469094 chr3 100921406 100922907 + 0.312910556469094 NA promoter-TSS (NM_194343) promoter-TSS (NM_194343) -337 NM_001165952 229644 Mm.189351 NM_194343 ENSMUSG00000033233 Trim45 4921530N01Rik tripartite motif-containing 45 protein-coding common_peak1_180_1554_-0.0134915495416035_10.5959530902472_0.3128871819737 chr8 119838800 119840647 + 0.3128871819737 NA intron (NM_028071, intron 2 of 3) intron (NM_028071, intron 2 of 3) 856 NM_028071 72042 Mm.393405 NM_028071 ENSMUSG00000031827 Cotl1 1810074P22Rik|2010004C08Rik|Clp coactosin-like 1 (Dictyostelium) protein-coding common_peak2_118_911_0.0141823560749028_9.83998119220219_0.31288306986167 chr14 121313590 121317742 + 0.31288306986167 NA intron (NM_145465, intron 2 of 10) intron (NM_145465, intron 2 of 10) 63564 NM_145465 223255 Mm.390756 NM_145465 ENSMUSG00000063410 Stk24 1810013H02Rik|C76483|MST-3|Mst3|STE20 serine/threonine kinase 24 protein-coding common_peak1_81_591_-0.0213977893771666_9.19875447094037_0.312867756291338 chr2 32452187 32452885 + 0.312867756291338 NA exon (NM_194335, exon 1 of 2) exon (NM_194335, exon 1 of 2) -1066 NM_146118 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak2_255_2341_0.00917714736937647_11.1981139341859_0.312862648099306 chr9 121856565 121858675 + 0.312862648099306 NA 5' UTR (NM_019814, exon 1 of 4) 5' UTR (NM_019814, exon 1 of 4) 380 NM_019814 56295 Mm.347915 NM_019814 ENSMUSG00000038412 Higd1a 2210020B17Rik|7420700H20Rik|AI303276|AW049839|HIMP1|Hig1 HIG1 domain family, member 1A protein-coding common_peak2_37_232_-0.0372096300710334_7.84558132961876_0.312857421356132 chr18 25241881 25243552 + 0.312857421356132 NA intron (NM_001033532, intron 5 of 10) intron (NM_001033532, intron 5 of 10) 73696 NM_001033532 225289 Mm.391081 NM_001033532 ENSMUSG00000033632 AW554918 4921538P22|AI461742|Kiaa1328|mKIAA1328 expressed sequence AW554918 protein-coding common_peak2_37_232_-0.0372096300710334_7.84558132961876_0.312857421356132-2 chr2 166634584 166636178 + 0.312857421356132 NA intron (NM_177782, intron 4 of 39) intron (NM_177782, intron 4 of 39) -37337 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA unique_peak2_26_145_0.0323830079595773_7.20601606285981_0.31284789720033 chr11 98782886 98783982 + 0.31284789720033 NA Intergenic Intergenic -8057 NM_145434 217166 Mm.390397 NM_145434 ENSMUSG00000020889 Nr1d1 A530070C09Rik|R75201 nuclear receptor subfamily 1, group D, member 1 protein-coding common_peak1_26_145_0.0323830079595773_7.20601606285981_0.31284789720033-3 chrX 95956436 95956931 + 0.31284789720033 NA exon (NM_152822, exon 1 of 13) exon (NM_152822, exon 1 of 13) 291 NM_152822 76130 Mm.274318 NM_152822 ENSMUSG00000057421 Las1l 1810030A06Rik|5830482G23Rik LAS1-like (S. cerevisiae) protein-coding common_peak1_26_145_0.0323830079595773_7.20601606285981_0.31284789720033 chr4 124754779 124755302 + 0.31284789720033 NA intron (NR_126474, intron 7 of 24) intron (NR_126474, intron 7 of 24) 11259 NR_030480 735263 NR_030480 ENSMUSG00000076119 Mir698 Mirn698|mir-698|mmu-mir-698 microRNA 698 ncRNA common_peak1_26_145_0.0323830079595773_7.20601606285981_0.31284789720033-2 chr7 19382211 19382733 + 0.31284789720033 NA intron (NM_007949, intron 2 of 22) PB1D7|SINE|Alu 433 NM_007949 13871 Mm.36524 NM_007949 ENSMUSG00000030400 Ercc2 AA407812|AU020867|AW240756|CXPD|Ercc-2|Mhdarco15|RCO015|XPD excision repair cross-complementing rodent repair deficiency, complementation group 2 protein-coding common_peak1_82_584_0.0172130546975815_9.20089934181956_0.31284762373528 chr4 43973296 43974575 + 0.31284762373528 NA intron (NM_027450, intron 4 of 4) intron (NM_027450, intron 4 of 4) -9569 NM_001002787 442829 Mm.348215 NM_001002787 ENSMUSG00000070999 Ccin 4933417A14Rik calicin protein-coding common_peak2_65_454_-0.0257904762388215_8.81682749696665_0.312839453876503 chr10 108167709 108169423 + 0.312839453876503 NA intron (NM_027892, intron 1 of 25) B1_Mus2|SINE|Alu 6166 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding common_peak1_66_448_0.0199720654085773_8.82055766744543_0.312813297298034 chr11 103966576 103967396 + 0.312813297298034 NA 5' UTR (NM_007477, exon 1 of 5) 5' UTR (NM_007477, exon 1 of 5) 115 NM_007477 11841 Mm.5061 NM_007477 ENSMUSG00000062421 Arf2 - ADP-ribosylation factor 2 protein-coding common_peak2_181_1564_-0.0129895879135766_10.6054521478632_0.312811051924856 chr19 7481740 7484204 + 0.312811051924856 NA exon (NM_001271487, exon 1 of 8) exon (NM_001271487, exon 1 of 8) 319 NM_001271486 20168 Mm.246990 NM_053076 ENSMUSG00000024758 Rtn3 RTN3-A1 reticulon 3 protein-coding common_peak2_159_1336_-0.0138125889035088_10.3778774556416_0.312785374897567 chr5 73192421 73195720 + 0.312785374897567 NA intron (NM_028194, intron 3 of 62) intron (NM_028194, intron 3 of 62) 62548 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_139_1113_0.0131368195562143_10.1281019271181_0.312775602298423 chr7 111028630 111029605 + 0.312775602298423 NA 5' UTR (NM_009431, exon 1 of 25) 5' UTR (NM_009431, exon 1 of 25) 166 NM_009431 22083 Mm.255858 NM_009431 ENSMUSG00000005609 Ctr9 AA409336|Sh2bp1|Tsbp|Tsp|mKIAA0155 CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding common_peak1_498_5320_0.00632091422648173_12.3806421452962_0.312758888791769 chr19 53888859 53894507 + 0.312758888791769 NA promoter-TSS (NM_011050) promoter-TSS (NM_011050) -548 NM_011050 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak1_38_229_0.0274533986634857_7.85921675027612_0.312755236582882-4 chr9 45254927 45255609 + 0.312755236582882 NA 3' UTR (NM_008348, exon 7 of 7) 3' UTR (NM_008348, exon 7 of 7) 11439 NR_106054 102466803 NR_106054 ENSMUSG00000098361 Mir7086 Gm27643|mmu-mir-7086 microRNA 7086 ncRNA common_peak1_38_229_0.0274533986634857_7.85921675027612_0.312755236582882 chr12 101957468 101958167 + 0.312755236582882 NA intron (NM_001167914, intron 1 of 8) intron (NM_001167914, intron 1 of 8) 426 NM_029705 110616 Mm.271914 NM_029705 ENSMUSG00000021189 Atxn3 2210008M02Rik|AI463012|AI647473|ATX3|MJD1|Mjd|Sca3|ataxin-3 ataxin 3 protein-coding common_peak1_38_229_0.0274533986634857_7.85921675027612_0.312755236582882-2 chr4 124714853 124715411 + 0.312755236582882 NA intron (NM_029157, intron 1 of 16) CpG 271 NM_029157 75062 Mm.25779 NM_029157 ENSMUSG00000028902 Sf3a3 4930512K19Rik|60kDa splicing factor 3a, subunit 3 protein-coding common_peak1_38_229_0.0274533986634857_7.85921675027612_0.312755236582882-3 chr5 137534881 137535661 + 0.312755236582882 NA Intergenic Intergenic -2042 NM_010312 14693 Mm.30141 NM_010312 ENSMUSG00000029713 Gnb2 Gnb-2 guanine nucleotide binding protein (G protein), beta 2 protein-coding unique_peak2_16_82_0.0284968296272474_6.38928784616055_0.312733171082057 chr11 121092636 121093243 + 0.312733171082057 NA Intergenic B1_Mm|SINE|Alu -11800 NM_145373 209588 Mm.69553 NM_145373 ENSMUSG00000025165 Sectm1a BC010462 secreted and transmembrane 1A protein-coding common_peak1_16_82_0.0284968296272474_6.38928784616055_0.312733171082057-2 chr3 21962591 21962880 + 0.312733171082057 NA Intergenic B4|SINE|B4 -113917 NM_030732 81004 Mm.202966 NM_030732 ENSMUSG00000027630 Tbl1xr1 8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1 transducin (beta)-like 1X-linked receptor 1 protein-coding common_peak1_16_82_0.0284968296272474_6.38928784616055_0.312733171082057 chr12 55488043 55488428 + 0.312733171082057 NA intron (NR_035430, intron 3 of 3) intron (NR_035430, intron 3 of 3) 4412 NM_010907 18035 Mm.170515 NM_010907 ENSMUSG00000021025 Nfkbia AI462015|Nfkbi nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha protein-coding common_peak2_207_1813_0.0102994376714776_10.8301084593643_0.312722568235278 chr11 57950823 57955443 + 0.312722568235278 NA Intergenic ID|SINE|ID -55931 NM_028451 73158 Mm.248843 NM_028451 ENSMUSG00000037331 Larp1 1810024J12Rik|3110040D16Rik|Larp|mKIAA0731 La ribonucleoprotein domain family, member 1 protein-coding common_peak2_257_2396_-0.010540196055544_11.2217440956214_0.312669400536552 chr11 68197859 68202578 + 0.312669400536552 NA intron (NM_018768, intron 7 of 7) intron (NM_018768, intron 7 of 7) -20674 NR_105833 102465219 NR_105833 ENSMUSG00000099174 Mir6406 Gm27981|mmu-mir-6406 microRNA 6406 ncRNA common_peak2_66_462_-0.0243246831105122_8.84270604170498_0.31263339604139 chrX 37126378 37127762 + 0.31263339604139 NA exon (NM_025937, exon 1 of 9) exon (NM_025937, exon 1 of 9) 307 NM_025937 67050 Mm.55422 NM_025937 ENSMUSG00000016409 Nkap 2610020O08Rik|AA987160|AI849147|AL024236 NFKB activating protein protein-coding common_peak2_51_340_-0.0315943731968851_8.39783074242573_0.312628517811212 chr1 85719694 85721450 + 0.312628517811212 NA intron (NM_177055, intron 4 of 5) intron (NM_177055, intron 4 of 5) 16034 NM_177055 319997 Mm.116691 NM_177055 ENSMUSG00000052760 A630001G21Rik - RIKEN cDNA A630001G21 gene protein-coding common_peak2_51_340_-0.0315943731968851_8.39783074242573_0.312628517811212-2 chr5 115279464 115280506 + 0.312628517811212 NA intron (NM_026504, intron 1 of 6) intron (NM_026504, intron 1 of 6) 283 NM_026504 52064 Mm.290142 NM_026504 ENSMUSG00000041733 Coq5 1810014G04Rik|D5Ertd33e coenzyme Q5 methyltransferase protein-coding common_peak1_185_1580_0.0108073797155761_10.6320253422162_0.312595702059813 chr10 79987527 79989691 + 0.312595702059813 NA promoter-TSS (NM_007725) promoter-TSS (NM_007725) 9 NM_007725 12798 Mm.157770 NM_007725 ENSMUSG00000004665 Cnn2 AA408047|AI324678|Calpo2 calponin 2 protein-coding common_peak1_52_335_0.0234243426643523_8.40402959411094_0.312594201754413 chr2 30718507 30719404 + 0.312594201754413 NA Intergenic Intergenic -2255 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA unique_peak2_26_153_-0.0445789738553062_7.24449705376725_0.312534821648236 chr9 72100050 72101108 + 0.312534821648236 NA intron (NM_011544, intron 3 of 20) intron (NM_011544, intron 3 of 20) 10622 NM_001253862 21406 Mm.171615 NM_011544 ENSMUSG00000032228 Tcf12 A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20 transcription factor 12 protein-coding common_peak1_101_771_-0.0181739489542672_9.58337006279095_0.312503594852993 chr9 122804967 122806371 + 0.312503594852993 NA 5' UTR (NM_001013405, exon 1 of 11) 5' UTR (NM_001013405, exon 1 of 11) 122 NM_001013405 382117 Mm.215892 NM_001013405 ENSMUSG00000046603 Tcaim D9Ertd402e|Gm1129|TOAG-1 T cell activation inhibitor, mitochondrial protein-coding common_peak2_185_1606_-0.012725181601148_10.6437916228745_0.312501700798562 chr4 43491820 43494306 + 0.312501700798562 NA promoter-TSS (NR_001460) promoter-TSS (NR_001460) -4 NR_001460 19782 NR_001460 ENSMUSG00000088088 Rmrp 1110032O22Rik|Rmrpr RNA component of mitochondrial RNAase P ncRNA common_peak1_84_602_0.0156276559524073_9.24382801987629_0.312496599903844 chr3 87884545 87885662 + 0.312496599903844 NA exon (NM_033573, exon 1 of 7) exon (NM_033573, exon 1 of 7) 459 NM_033573 94315 Mm.35089 NM_033573 ENSMUSG00000004895 Prcc - papillary renal cell carcinoma (translocation-associated) protein-coding common_peak2_209_1863_-0.0119936027911045_10.8581893432587_0.312495771561153 chr7 44245749 44247615 + 0.312495771561153 NA promoter-TSS (NM_025880) promoter-TSS (NM_025880) -40 NM_025880 668661 Mm.274492 NM_025880 ENSMUSG00000045411 2410002F23Rik - RIKEN cDNA 2410002F23 gene protein-coding common_peak2_52_347_-0.0272017304056167_8.42934263064592_0.312392495326317 chr6 124321019 124322526 + 0.312392495326317 NA intron (NM_001170395, intron 11 of 16) RLTR19-int|LTR|ERVK 17121 NM_053094 93671 Mm.37426 NM_053094 ENSMUSG00000008845 Cd163 CD163v2|CD163v3 CD163 antigen protein-coding common_peak2_68_465_0.0184091755925149_8.87339073245054_0.312385720083811 chr3 97657630 97659216 + 0.312385720083811 NA intron (NM_182997, intron 1 of 7) CpG 211 NM_182997 108097 Mm.31175 NM_182997 ENSMUSG00000038205 Prkab2 5730553K21Rik|AW049591|BB124140 protein kinase, AMP-activated, beta 2 non-catalytic subunit protein-coding common_peak2_39_237_0.0229287755091887_7.90628215106254_0.312363564794353 chr11 52298926 52299764 + 0.312363564794353 NA Intergenic Intergenic -16331 NM_001313981 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak2_39_237_0.0229287755091887_7.90628215106254_0.312363564794353-2 chr4 124714822 124715477 + 0.312363564794353 NA intron (NM_029157, intron 1 of 16) CpG 288 NM_029157 75062 Mm.25779 NM_029157 ENSMUSG00000028902 Sf3a3 4930512K19Rik|60kDa splicing factor 3a, subunit 3 protein-coding common_peak1_16_88_-0.0721971699922257_6.43963484597028_0.312327239180829-4 chr5 36089902 36090228 + 0.312327239180829 NA intron (NM_030889, intron 3 of 26) ORR1F|LTR|ERVL-MaLR -113956 NM_175249 76943 Mm.44242 NM_175249 ENSMUSG00000043430 Psapl1 2310020A21Rik prosaposin-like 1 protein-coding common_peak1_16_88_-0.0721971699922257_6.43963484597028_0.312327239180829-2 chr17 78977895 78978496 + 0.312327239180829 NA intron (NM_029239, intron 5 of 18) intron (NM_029239, intron 5 of 18) 30310 NM_001171005 75292 Mm.252776 NM_029239 ENSMUSG00000024070 Prkd3 4930557O20Rik|5730497N19Rik|PKD3|Pkcnu|Prkcn protein kinase D3 protein-coding unique_peak2_16_88_-0.0721971699922257_6.43963484597028_0.312327239180829 chr12 8313324 8314003 + 0.312327239180829 NA intron (NM_021429, intron 1 of 6) intron (NM_021429, intron 1 of 6) 230 NM_021429 58240 Mm.309954 NM_021429 ENSMUSG00000020605 Hs1bp3 - HCLS1 binding protein 3 protein-coding unique_peak2_16_88_-0.0721971699922257_6.43963484597028_0.312327239180829-2 chr15 79063250 79063835 + 0.312327239180829 NA promoter-TSS (NM_144849) promoter-TSS (NM_144849) -683 NM_144849 223690 Mm.24262 NM_144849 ENSMUSG00000033055 Ankrd54 C730048E16Rik|EST1068184|EST475269|Liar ankyrin repeat domain 54 protein-coding unique_peak2_16_88_-0.0721971699922257_6.43963484597028_0.312327239180829-3 chr4 128732871 128733689 + 0.312327239180829 NA intron (NM_001195083, intron 1 of 6) intron (NM_001195083, intron 1 of 6) 5709 NM_001195083 54383 Mm.473738 NM_018774 ENSMUSG00000028796 Phc2 A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36 polyhomeotic-like 2 (Drosophila) protein-coding common_peak1_16_88_-0.0721971699922257_6.43963484597028_0.312327239180829-3 chr18 67309116 67309506 + 0.312327239180829 NA intron (NM_053261, intron 4 of 7) intron (NM_053261, intron 4 of 7) 20088 NM_053261 114663 Mm.34079 NM_053261 ENSMUSG00000024525 Impa2 2210415D20Rik|AI326924|AW259601 inositol (myo)-1(or 4)-monophosphatase 2 protein-coding common_peak1_16_88_-0.0721971699922257_6.43963484597028_0.312327239180829 chr17 29002972 29003316 + 0.312327239180829 NA intron (NM_134115, intron 1 of 13) B1_Mus2|SINE|Alu 4793 NM_134115 106504 Mm.439986 NM_134115 ENSMUSG00000024006 Stk38 5830476G13Rik|9530097A09Rik|AA617404|Ndr1 serine/threonine kinase 38 protein-coding common_peak2_27_152_0.0291769073252732_7.27197629635529_0.31231068893489 chr15 36496158 36496878 + 0.31231068893489 NA intron (NM_175134, intron 1 of 4) CpG 273 NM_175134 68839 Mm.396537 NM_175134 ENSMUSG00000048307 Ankrd46 1110054N06Rik|AI314978|AI987733 ankyrin repeat domain 46 protein-coding common_peak2_27_152_0.0291769073252732_7.27197629635529_0.31231068893489-2 chr6 129050600 129051929 + 0.31231068893489 NA intron (NR_024262, intron 1 of 5) RLTR18B|LTR|ERVK 5363 NR_024263 232408 Mm.259262 NM_153094 ENSMUSG00000030154 Klrb1f A630024B12Rik|Nkr-p1f|Nkrp1-f|Nkrp1f killer cell lectin-like receptor subfamily B member 1F protein-coding common_peak1_27_152_0.0291769073252732_7.27197629635529_0.31231068893489 chr13 49681551 49682081 + 0.31231068893489 NA promoter-TSS (NM_172015) promoter-TSS (NM_172015) -314 NM_172015 105148 Mm.21118 NM_172015 ENSMUSG00000037851 Iars 2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS isoleucine-tRNA synthetase protein-coding common_peak1_27_152_0.0291769073252732_7.27197629635529_0.31231068893489-2 chr5 72740738 72741331 + 0.31231068893489 NA intron (NM_001289495, intron 1 of 14) ORR1F|LTR|ERVL-MaLR -4432 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding unique_peak2_27_152_0.0291769073252732_7.27197629635529_0.31231068893489 chrX 142384420 142385479 + 0.31231068893489 NA intron (NM_001033600, intron 1 of 15) L1MD1|LINE|L1 5586 NM_001033600 50790 Mm.391337 NM_019477 ENSMUSG00000031278 Acsl4 9430020A05Rik|ACS4|AU018108|Facl4|Lacs4 acyl-CoA synthetase long-chain family member 4 protein-coding common_peak2_239_2163_0.00900858232995638_11.0839890749918_0.312285058192345 chr2 26501737 26504721 + 0.312285058192345 NA promoter-TSS (NR_132655) promoter-TSS (NR_132655) 593 NM_008714 18128 Mm.290610 NM_008714 ENSMUSG00000026923 Notch1 9930111A19Rik|Mis6|N1|Tan1|lin-12 notch 1 protein-coding common_peak1_322_3117_0.00769123329353327_11.6102508293446_0.312283323121488 chr1 75140923 75143490 + 0.312283323121488 NA promoter-TSS (NM_001305232) promoter-TSS (NM_001305232) 162 NM_026977 69171 Mm.28193 NM_026977 ENSMUSG00000033159 Cnppd1 1810031K17Rik|AU043960 cyclin Pas1/PHO80 domain containing 1 protein-coding common_peak2_104_781_0.0145554333694662_9.61830251399209_0.312226063600503 chr1 161727207 161730007 + 0.312226063600503 NA Intergenic Intergenic 59888 NM_001205243 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak2_189_1648_-0.0122935819759_10.6812288924495_0.312208180135552 chr3 89186571 89191486 + 0.312208180135552 NA 3' UTR (NM_001014995, exon 12 of 12) 3' UTR (NM_001014995, exon 12 of 12) 5803 NM_001014995 68521 Mm.274708 NM_001014995 ENSMUSG00000032657 Fam189b 1110013L07Rik family with sequence similarity 189, member B protein-coding common_peak2_85_626_-0.0199821513617344_9.28233055712117_0.31220163490247 chr18 74215370 74217068 + 0.31220163490247 NA promoter-TSS (NM_028868) promoter-TSS (NM_028868) 7 NM_028868 74322 Mm.17537 NM_028868 ENSMUSG00000024560 Cxxc1 2410002I16Rik|5830420C16Rik|AI426635|Cfp1|Cgbp|PHF18 CXXC finger 1 (PHD domain) protein-coding common_peak2_69_473_0.0193147768116315_8.89840063730407_0.312195064379705 chr19 36408952 36410622 + 0.312195064379705 NA intron (NM_029508, intron 1 of 8) CpG 30720 NM_029508 76073 Mm.259180 NM_029508 ENSMUSG00000024805 Pcgf5 0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127 polycomb group ring finger 5 protein-coding common_peak1_86_619_0.0166734253916143_9.28446111797005_0.312183702650955 chr17 8128433 8129550 + 0.312183702650955 NA intron (NM_001083938, intron 8 of 8) intron (NM_001083938, intron 8 of 8) 18797 NM_001083938 100037283 Mm.426736 NM_001083938 ENSMUSG00000095687 Rnaset2a 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2A protein-coding common_peak1_144_1185_-0.0151193931551141_10.2043285979684_0.312168152244759 chr11 120548609 120550322 + 0.312168152244759 NA TTS (NM_026814) TTS (NM_026814) 262 NM_001033231 192173 Mm.262300 NM_001033231 ENSMUSG00000061111 Fam195b Mcrip1 family with sequence similarity 195, member B protein-coding common_peak1_39_247_-0.0364497715697425_7.935971424602_0.312131786302258 chr11 115138959 115139649 + 0.312131786302258 NA intron (NM_001163753, intron 1 of 8) intron (NM_001163753, intron 1 of 8) -5312 NM_145634 246746 Mm.277387 NM_145634 ENSMUSG00000047798 Cd300lf CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3 CD300 molecule like family member F protein-coding common_peak2_39_247_-0.0364497715697425_7.935971424602_0.312131786302258 chr10 8414862 8415874 + 0.312131786302258 NA intron (NM_177387, intron 1 of 7) intron (NM_177387, intron 1 of 7) 103457 NM_177387 338362 Mm.41163 NM_177387 ENSMUSG00000047712 Ust D930010O20Rik|UA2OST uronyl-2-sulfotransferase protein-coding common_peak1_167_1418_-0.0133472967029853_10.4639852257091_0.312102692831403 chr3 106481947 106483861 + 0.312102692831403 NA non-coding (NR_033207, exon 2 of 2) non-coding (NR_033207, exon 2 of 2) 454 NM_001278941 72121 Mm.14816 NM_028110 ENSMUSG00000027901 Dennd2d 2010308M01Rik|AI451421 DENN/MADD domain containing 2D protein-coding common_peak1_241_2215_-0.0105630102273846_11.1084606609355_0.312096410884246 chr15 60122258 60125292 + 0.312096410884246 NA Intergenic Intergenic -107157 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_54_351_0.0218593997486192_8.47036131851161_0.312071512963168 chr2 73469741 73470484 + 0.312071512963168 NA intron (NM_153138, intron 1 of 7) intron (NM_153138, intron 1 of 7) 15641 NM_001289723 215280 Mm.223504 NM_153138 ENSMUSG00000075284 Wipf1 AI115543|D2Ertd120e|WIP|Waspip WAS/WASL interacting protein family, member 1 protein-coding common_peak2_40_244_0.0248053260628547_7.949040602034_0.312041707820815 chr2 52318281 52319460 + 0.312041707820815 NA intron (NM_010889, intron 10 of 156) GA-rich|Low_complexity|Low_complexity 19928 NM_010889 17996 Mm.389247 NM_010889 ENSMUSG00000026950 Neb AI595938 nebulin protein-coding unique_peak2_40_244_0.0248053260628547_7.949040602034_0.312041707820815 chr4 133092110 133093712 + 0.312041707820815 NA Intergenic Intergenic -37722 NM_153423 242687 Mm.23566 NM_153423 ENSMUSG00000028868 Wasf2 AW742646|D4Ertd13e|WAVE2 WAS protein family, member 2 protein-coding common_peak2_40_244_0.0248053260628547_7.949040602034_0.312041707820815-2 chr9 107568397 107569679 + 0.312041707820815 NA promoter-TSS (NM_010489) promoter-TSS (NM_010489) -125 NM_010489 15587 Mm.4834 NM_010489 ENSMUSG00000010047 Hyal2 AI256841|AU020858|AW555733 hyaluronoglucosaminidase 2 protein-coding common_peak1_27_160_-0.0443521280966914_7.30874081406627_0.31202508631036 chr19 40271212 40271777 + 0.31202508631036 NA 5' UTR (NM_016861, exon 1 of 7) 5' UTR (NM_016861, exon 1 of 7) 122 NM_016861 54132 Mm.5567 NM_016861 ENSMUSG00000055044 Pdlim1 CLP36|Clim1|mClim1 PDZ and LIM domain 1 (elfin) protein-coding unique_peak2_27_160_-0.0443521280966914_7.30874081406627_0.31202508631036 chr9 73239110 73240344 + 0.31202508631036 NA Intergenic RMER17B|LTR|ERVK 126258 NM_198609 225215 Mm.379366 NM_198609 ENSMUSG00000032215 Rsl24d1 2410159K22Rik ribosomal L24 domain containing 1 protein-coding common_peak1_27_160_-0.0443521280966914_7.30874081406627_0.31202508631036-2 chr9 107568586 107569168 + 0.31202508631036 NA promoter-TSS (NM_010489) promoter-TSS (NM_010489) -286 NM_010489 15587 Mm.4834 NM_010489 ENSMUSG00000010047 Hyal2 AI256841|AU020858|AW555733 hyaluronoglucosaminidase 2 protein-coding common_peak1_193_1664_0.0106442125911403_10.7066285682542_0.312014125062789 chr15 51990363 51991922 + 0.312014125062789 NA intron (NM_009009, intron 1 of 13) CpG 618 NM_009009 19357 Mm.182628 NM_009009 ENSMUSG00000022314 Rad21 SCC1|mKIAA0078 RAD21 cohesin complex component protein-coding common_peak1_244_2218_0.00928787159199373_11.120337887993_0.31200690460669 chr6 145339352 145340843 + 0.31200690460669 NA Intergenic Intergenic -47528 NR_003625 381827 Mm.179075 NM_001001987 1700073E17Rik - ribosomal protein L7 pseudogene pseudo common_peak2_17_88_0.0289519309062696_6.49020939641953_0.3119485245501-2 chr5 122263930 122264533 + 0.3119485245501 NA exon (NM_001039153, exon 1 of 14) exon (NM_001039153, exon 1 of 14) 229 NR_104441 654470 Mm.28804 NM_001039153 ENSMUSG00000038593 Tctn1 G730031O11Rik|Tect1 tectonic family member 1 protein-coding common_peak1_17_88_0.0289519309062696_6.49020939641953_0.3119485245501 chr1 164275579 164275999 + 0.3119485245501 NA intron (NM_029115, intron 1 of 5) intron (NM_029115, intron 1 of 5) 191 NM_029115 74895 Mm.167258 NM_029115 ENSMUSG00000026578 Ccdc181 4930455F23Rik|AI427889 coiled-coil domain containing 181 protein-coding unique_peak2_17_88_0.0289519309062696_6.49020939641953_0.3119485245501 chr4 140772889 140773690 + 0.3119485245501 NA intron (NM_011061, intron 1 of 15) intron (NM_011061, intron 1 of 15) 914 NM_011061 18602 Mm.250358 NM_011061 ENSMUSG00000025330 Padi4 Pad4|Pdi4 peptidyl arginine deiminase, type IV protein-coding common_peak1_17_88_0.0289519309062696_6.49020939641953_0.3119485245501-4 chr3 96579672 96580162 + 0.3119485245501 NA intron (NM_027241, intron 6 of 7) intron (NM_027241, intron 6 of 7) -13116 NR_040409 100038464 Mm.475126 NR_040409 ENSMUSG00000074398 Gm15441 ENSMUSG00000074398|OTTMUSG00000021867 predicted gene 15441 ncRNA common_peak1_17_88_0.0289519309062696_6.49020939641953_0.3119485245501-3 chr3 52499488 52499892 + 0.3119485245501 NA Intergenic Intergenic 231353 NM_019739 56458 Mm.29891 NM_019739 ENSMUSG00000044167 Foxo1 AI876417|Afxh|FKHR|Fkhr1|Foxo1a forkhead box O1 protein-coding common_peak1_17_88_0.0289519309062696_6.49020939641953_0.3119485245501-2 chr19 46696780 46697190 + 0.3119485245501 NA intron (NM_025563, intron 1 of 4) RMER19C|LTR|ERVK 7079 NM_025563 66439 Mm.87163 NM_025563 ENSMUSG00000062376 Borcs7 2010012O05Rik|4930569L17Rik|AI413851|AI467257 BLOC-1 related complex subunit 7 protein-coding common_peak1_17_88_0.0289519309062696_6.49020939641953_0.3119485245501-5 chr6 50525072 50525497 + 0.3119485245501 NA Intergenic L1_Mus2|LINE|L1 41190 NM_007808 13063 Mm.35389 NM_007808 ENSMUSG00000063694 Cycs - cytochrome c, somatic protein-coding common_peak2_17_88_0.0289519309062696_6.49020939641953_0.3119485245501 chr2 72475802 72476422 + 0.3119485245501 NA promoter-TSS (NM_025866) promoter-TSS (NM_025866) -107 NM_025866 66953 Mm.270676 NM_025866 ENSMUSG00000055612 Cdca7 2310021G01Rik|AU044109|JPO1 cell division cycle associated 7 protein-coding common_peak2_87_644_-0.0201329852439525_9.32308885768864_0.311887428398281 chr17 56182765 56184856 + 0.311887428398281 NA exon (NM_080837, exon 1 of 6) exon (NM_080837, exon 1 of 6) 110 NM_080837 28106 Mm.294870 NM_080837 ENSMUSG00000019579 Mydgf D17Wsu104e|Il25|Ly6elg myeloid derived growth factor protein-coding common_peak1_88_637_0.0156057549993189_9.32521549126453_0.311870489905914 chr11 120436855 120437876 + 0.311870489905914 NA intron (NM_001195023, intron 1 of 16) CpG 335 NM_001195023 217365 Mm.309520 NM_199469 ENSMUSG00000039703 Nploc4 AK129375|Npl4|mKIAA1499 NPL4 homolog, ubiquitin recognition factor protein-coding common_peak1_40_254_-0.0329101717934321_7.97789835096214_0.311822779817504-2 chr13 23423296 23423877 + 0.311822779817504 NA exon (NM_013924, exon 1 of 3) exon (NM_013924, exon 1 of 3) 280 NM_013924 30946 Mm.292094 NM_013924 ENSMUSG00000036376 Abt1 - activator of basal transcription 1 protein-coding common_peak1_40_254_-0.0329101717934321_7.97789835096214_0.311822779817504 chr1 131527748 131528447 + 0.311822779817504 NA promoter-TSS (NM_001081011) promoter-TSS (NM_001081011) 108 NM_175382 108900 Mm.31278 NM_175382 ENSMUSG00000055184 Fam72a 2700049P18Rik|P17 family with sequence similarity 72, member A protein-coding common_peak1_28_159_0.0267352196252055_7.33529570469997_0.311820198205192 chr10 54038641 54039159 + 0.311820198205192 NA intron (NM_008548, intron 2 of 12) intron (NM_008548, intron 2 of 12) 36896 NM_008548 17155 Mm.117294 NM_008548 ENSMUSG00000003746 Man1a Man1a1|PCR1 mannosidase 1, alpha protein-coding unique_peak2_28_159_0.0267352196252055_7.33529570469997_0.311820198205192 chr4 141506407 141507364 + 0.311820198205192 NA intron (NM_019763, intron 3 of 15) intron (NM_019763, intron 3 of 15) 31712 NM_019763 56381 Mm.299906 NM_019763 ENSMUSG00000040761 Spen Mint|mKIAA0929 SPEN homolog, transcriptional regulator (Drosophila) protein-coding common_peak1_28_159_0.0267352196252055_7.33529570469997_0.311820198205192-2 chr12 102298248 102298837 + 0.311820198205192 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 14901 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding unique_peak2_28_159_0.0267352196252055_7.33529570469997_0.311820198205192-2 chr5 135529775 135531036 + 0.311820198205192 NA intron (NM_146001, intron 1 of 30) intron (NM_146001, intron 1 of 30) 14717 NM_146001 215114 Mm.280805 NM_146001 ENSMUSG00000039959 Hip1 2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113 huntingtin interacting protein 1 protein-coding common_peak1_28_159_0.0267352196252055_7.33529570469997_0.311820198205192-3 chr4 152207189 152207863 + 0.311820198205192 NA intron (NM_001146057, intron 2 of 8) intron (NM_001146057, intron 2 of 8) 7682 NM_001146058 70025 Mm.296191 NM_133348 ENSMUSG00000028937 Acot7 2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1 acyl-CoA thioesterase 7 protein-coding common_peak1_107_827_-0.0180547682870174_9.68445957335582_0.311722405552415 chr7 126471727 126473127 + 0.311722405552415 NA exon (NM_011363, exon 2 of 10) exon (NM_011363, exon 2 of 10) 667 NR_110346 20399 Mm.8538 NM_011363 ENSMUSG00000030733 Sh2b1 AI425885|C530001K22Rik|Irip|Psm|SH2-B|SH2-Bb|Sh2bpsm1|mKIAA1299 SH2B adaptor protein 1 protein-coding common_peak1_41_252_0.0210933802905444_7.99354026483958_0.311695552312209-2 chr7 101933901 101934536 + 0.311695552312209 NA promoter-TSS (NM_001162973) promoter-TSS (NM_001162973) -361 NM_001162973 69358 Mm.214841 NM_027053 ENSMUSG00000064307 Lrrc51 1700008D07Rik|Lrtomt leucine rich repeat containing 51 protein-coding common_peak1_41_252_0.0210933802905444_7.99354026483958_0.311695552312209 chr17 35045902 35046675 + 0.311695552312209 NA exon (NM_013600, exon 1 of 24) exon (NM_013600, exon 1 of 24) 334 NM_013600 17687 Mm.24192 NM_013600 ENSMUSG00000007035 Msh5 Mut5 mutS homolog 5 protein-coding common_peak1_71_504_-0.0222295933937779_8.96902478094227_0.311659667522148-2 chr11 19986576 19987606 + 0.311659667522148 NA intron (NM_033523, intron 1 of 5) intron (NM_033523, intron 1 of 5) 62649 NM_033523 114716 Mm.266627 NM_033523 ENSMUSG00000045671 Spred2 C79158 sprouty-related, EVH1 domain containing 2 protein-coding common_peak1_71_504_-0.0222295933937779_8.96902478094227_0.311659667522148 chr1 144003475 144004187 + 0.311659667522148 NA intron (NM_009061, intron 1 of 4) intron (NM_009061, intron 1 of 4) 318 NM_009061 19735 Mm.28262 NM_009061 ENSMUSG00000026360 Rgs2 GOS8 regulator of G-protein signaling 2 protein-coding common_peak1_150_1244_-0.0134096419698917_10.2752252059705_0.311637546136481 chr1 173941582 173943068 + 0.311637546136481 NA intron (NM_001302650, intron 1 of 8) intron (NM_001302650, intron 1 of 8) 167 NM_001302649 15950 Mm.463437 NM_008328 ENSMUSG00000039997 Ifi203 Mndal interferon activated gene 203 protein-coding common_peak1_150_1244_-0.0134096419698917_10.2752252059705_0.311637546136481-2 chr19 40830528 40832056 + 0.311637546136481 NA promoter-TSS (NM_172839) promoter-TSS (NM_172839) 13 NM_172839 240665 Mm.309 NM_172839 ENSMUSG00000025010 Ccnj D430039C20Rik cyclin J protein-coding common_peak1_17_94_-0.0651702464582806_6.53727048510181_0.311594378534172-4 chr2 24383795 24384244 + 0.311594378534172 NA Intergenic Intergenic -1378 NM_177611 215632 Mm.490434 NM_177611 ENSMUSG00000026979 Psd4 BC046518|EFA6B pleckstrin and Sec7 domain containing 4 protein-coding common_peak1_17_94_-0.0651702464582806_6.53727048510181_0.311594378534172-5 chrX 95444366 95444845 + 0.311594378534172 NA intron (NM_175179, intron 1 of 1) intron (NM_175179, intron 1 of 1) 235 NM_175179 72345 Mm.182867 NM_175179 ENSMUSG00000050332 Amer1 2810002O09Rik|AW492303|Fam123b|Wtx APC membrane recruitment 1 protein-coding common_peak1_17_94_-0.0651702464582806_6.53727048510181_0.311594378534172-2 chr15 78453411 78453754 + 0.311594378534172 NA intron (NM_027902, intron 8 of 17) intron (NM_027902, intron 8 of 17) 15052 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak1_17_94_-0.0651702464582806_6.53727048510181_0.311594378534172-3 chr2 6716908 6717353 + 0.311594378534172 NA intron (NM_001310447, intron 1 of 11) intron (NM_001310447, intron 1 of 11) 4532 NM_001310447 14007 Mm.398543 NM_010160 ENSMUSG00000002107 Celf2 B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3 CUGBP, Elav-like family member 2 protein-coding common_peak1_17_94_-0.0651702464582806_6.53727048510181_0.311594378534172 chr1 181249682 181250088 + 0.311594378534172 NA Intergenic Intergenic -37907 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding common_peak1_56_367_0.020936763493161_8.53403033780359_0.311594031244975 chr4 46555665 46556811 + 0.311594031244975 NA intron (NM_001164804, intron 2 of 11) intron (NM_001164804, intron 2 of 11) 10202 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding unique_peak2_28_167_-0.0436541082661925_7.37049036864566_0.311558604566487 chr1 181234025 181235357 + 0.311558604566487 NA Intergenic Intergenic -22713 NM_145514 226757 Mm.289082 NM_145514 ENSMUSG00000038733 Wdr26 1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7 WD repeat domain 26 protein-coding unique_peak2_28_167_-0.0436541082661925_7.37049036864566_0.311558604566487-3 chr7 19332341 19333517 + 0.311558604566487 NA Intergenic CpG -12142 NM_001127324 13870 Mm.280913 NM_007948 ENSMUSG00000003549 Ercc1 Ercc-1 excision repair cross-complementing rodent repair deficiency, complementation group 1 protein-coding unique_peak2_28_167_-0.0436541082661925_7.37049036864566_0.311558604566487-2 chr3 108019872 108021197 + 0.311558604566487 NA Intergenic Intergenic -2561 NM_010358 14862 Mm.37199 NM_010358 ENSMUSG00000058135 Gstm1 Gstb-1|Gstb1 glutathione S-transferase, mu 1 protein-coding common_peak1_152_1243_0.011034523150137_10.2862880317057_0.311552583225258 chr14 79518318 79520114 + 0.311552583225258 NA intron (NM_001286411, intron 1 of 8) intron (NM_001286411, intron 1 of 8) 3542 NM_001286411 13709 Mm.20938 NM_007920 ENSMUSG00000036461 Elf1 Elf-1|Sts1|mElf-1|p70 E74-like factor 1 protein-coding common_peak1_252_2338_-0.00983392913106584_11.1867591817869_0.311512341415984 chr9 31029275 31031463 + 0.311512341415984 NA promoter-TSS (NM_172765) promoter-TSS (NM_172765) -275 NM_001115130 235132 Mm.239355 NM_172765 ENSMUSG00000047412 Zbtb44 6030404E16Rik|Btbd15|E230011F09 zinc finger and BTB domain containing 44 protein-coding common_peak2_110_837_0.0131117336653439_9.71736230053202_0.311480982205256 chr2 90678660 90680168 + 0.311480982205256 NA exon (NM_021512, exon 2 of 37) exon (NM_021512, exon 2 of 37) 2199 NM_021512 59015 Mm.24532 NM_021512 ENSMUSG00000051329 Nup160 160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197 nucleoporin 160 protein-coding common_peak1_200_1765_-0.01159141134546_10.7804739219757_0.311464447552964 chr7 46845605 46847462 + 0.311464447552964 NA promoter-TSS (NM_001136069) promoter-TSS (NM_001136069) -549 NM_001136069 16828 Mm.29324 NM_010699 ENSMUSG00000063229 Ldha Ldh1|Ldhm|l7R2 lactate dehydrogenase A protein-coding common_peak1_73_507_0.0177112756256008_8.99754032458497_0.311451443426455 chr16 11461716 11462887 + 0.311451443426455 NA intron (NM_001290148, intron 6 of 13) intron (NM_001290148, intron 6 of 13) 56653 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak1_91_664_0.0144748960776706_9.38444797842739_0.311432320868758 chr6 39377002 39377857 + 0.311432320868758 NA intron (NM_028123, intron 1 of 14) CpG 278 NM_028123 72144 Mm.482167 NM_028123 ENSMUSG00000029924 Slc37a3 2610507O21Rik|AU044904 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 protein-coding common_peak1_56_379_-0.0253568887807738_8.55717716394056_0.3114254526027 chr4 16013425 16014516 + 0.3114254526027 NA promoter-TSS (NM_145950) promoter-TSS (NM_145950) -93 NM_145950 209212 Mm.46455 NM_145950 ENSMUSG00000041153 Osgin2 BC010311|C230027H09Rik oxidative stress induced growth inhibitor family member 2 protein-coding common_peak1_42_259_0.0233593572254964_8.0340474916412_0.311410041021173-2 chr5 72726092 72727033 + 0.311410041021173 NA intron (NM_001289494, intron 4 of 13) Lx5|LINE|L1 10040 NM_013698 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_42_259_0.0233593572254964_8.0340474916412_0.311410041021173 chr1 162207459 162208062 + 0.311410041021173 NA intron (NM_172646, intron 14 of 19) intron (NM_172646, intron 14 of 19) -9863 NR_002870 474332 Mm.479755 NR_002870 ENSMUSG00000078190 Dnm3os 6030416H16Rik|Hag2|Npn1|P/L01 dynamin 3, opposite strand ncRNA common_peak2_344_3381_0.00703996271512963_11.7271809257675_0.311406955649562 chrX 164011259 164019613 + 0.311406955649562 NA intron (NM_181315, intron 1 of 7) intron (NM_181315, intron 1 of 7) 12574 NM_181315 56078 Mm.180953 NM_181315 ENSMUSG00000031373 Car5b 7330410H16Rik|CAVB|Ca5b|CarVb|D730005F19Rik carbonic anhydrase 5b, mitochondrial protein-coding common_peak2_29_166_0.0249521401236512_7.39618036253588_0.311370584729861 chr8 19979943 19980839 + 0.311370584729861 NA intron (NM_001270553, intron 6 of 9) CpG 250815 NM_001039553 626415 Mm.425517 NM_001039553 ENSMUSG00000096265 4930467E23Rik ENSMUSG00000074453|OTTMUSG00000018948|TSAP RIKEN cDNA 4930467E23 gene protein-coding common_peak1_29_166_0.0249521401236512_7.39618036253588_0.311370584729861 chr2 131422780 131423350 + 0.311370584729861 NA intron (NR_037281, intron 1 of 2) intron (NR_037281, intron 1 of 2) -68797 NM_001177834 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding common_peak2_57_375_0.0206867740212875_8.56493223868828_0.311370449027206 chr7 97068095 97070462 + 0.311370449027206 NA Intergenic ID_B1|SINE|B4 -12473 NM_001162477 14389 Mm.42033 NM_010248 ENSMUSG00000004508 Gab2 AI463667|D130058I17Rik|p97 growth factor receptor bound protein 2-associated protein 2 protein-coding common_peak1_91_680_-0.0198255615458489_9.40159820723915_0.311309214983114 chr17 73941745 73943085 + 0.311309214983114 NA intron (NM_011723, intron 2 of 35) intron (NM_011723, intron 2 of 35) 7781 NM_011723 22436 Mm.11223 NM_011723 ENSMUSG00000024066 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase protein-coding common_peak1_179_1518_0.0104971054352596_10.5741547072197_0.311288946936856 chr3 93591072 93593531 + 0.311288946936856 NA Intergenic Intergenic 37184 NM_009112 20194 Mm.1 NM_009112 ENSMUSG00000041959 S100a10 42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11 S100 calcium binding protein A10 (calpactin) protein-coding unique_peak2_18_94_0.0305085950659425_6.58510990586392_0.311262485365833 chr5 3341178 3342001 + 0.311262485365833 NA Intergenic CpG -2304 NM_009873 12571 Mm.31672 NM_009873 ENSMUSG00000040274 Cdk6 AI504062|Crk2 cyclin-dependent kinase 6 protein-coding common_peak1_18_94_0.0305085950659425_6.58510990586392_0.311262485365833 chr1 153709787 153710213 + 0.311262485365833 NA Intergenic Intergenic 27829 NR_046171 329271 Mm.384841 NR_046171 ENSMUSG00000100334 C230024C17Rik C230024C17 RIKEN cDNA C230024C17 gene ncRNA unique_peak2_18_94_0.0305085950659425_6.58510990586392_0.311262485365833-2 chr7 42500922 42501793 + 0.311262485365833 NA intron (NM_001309388, intron 2 of 6) intron (NM_001309388, intron 2 of 6) 4396 NM_001309389 434178 Mm.333810 NM_001309388 ENSMUSG00000092416 Zfp141 - zinc finger protein 141 protein-coding common_peak1_18_94_0.0305085950659425_6.58510990586392_0.311262485365833-4 chr6 68250667 68251261 + 0.311262485365833 NA Intergenic RLTR3_Mm|LTR|ERVK -685265 NR_003100 75070 Mm.463364 NR_003100 4930515G16Rik - myc induced nuclear antigen pseudogene pseudo unique_peak2_18_94_0.0305085950659425_6.58510990586392_0.311262485365833-3 chr9 75414001 75414902 + 0.311262485365833 NA intron (NR_040719, intron 3 of 3) intron (NR_040719, intron 3 of 3) 4267 NR_040719 71274 Mm.399152 NR_040719 ENSMUSG00000097021 4933433G15Rik 4921522K19Rik RIKEN cDNA 4933433G15 gene ncRNA common_peak1_18_94_0.0305085950659425_6.58510990586392_0.311262485365833-3 chr13 53056743 53057126 + 0.311262485365833 NA Intergenic Intergenic -75895 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_18_94_0.0305085950659425_6.58510990586392_0.311262485365833-2 chr10 117377276 117377658 + 0.311262485365833 NA promoter-TSS (NM_001013391) promoter-TSS (NM_001013391) -494 NM_001310609 432508 Mm.478881 NM_001013391 ENSMUSG00000055531 Cpsf6 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding common_peak1_42_269_-0.031088426796881_8.06127138365239_0.311215287686131 chr11 62494804 62495525 + 0.311215287686131 NA intron (NM_001039536, intron 2 of 6) intron (NM_001039536, intron 2 of 6) 36704 NM_001039536 327942 Mm.390358 NM_199026 ENSMUSG00000014245 Pigl Gm737 phosphatidylinositol glycan anchor biosynthesis, class L protein-coding common_peak1_231_2103_-0.0104187412206667_11.033709618682_0.311182891260012 chr2 121139534 121141454 + 0.311182891260012 NA promoter-TSS (NM_001290811) promoter-TSS (NM_001290811) 66 NM_001290812 75894 Mm.384805 NM_029475 ENSMUSG00000027259 Adal 4930578F03Rik adenosine deaminase-like protein-coding common_peak1_133_1075_-0.0143063512205437_10.0643091869464_0.311177099926331 chr18 56755875 56757203 + 0.311177099926331 NA Intergenic Intergenic 48726 NM_010721 16906 Mm.4105 NM_010721 ENSMUSG00000024590 Lmnb1 - lamin B1 protein-coding common_peak2_74_530_-0.0224183425144862_9.04135887954691_0.311134737521497 chr7 135715178 135717351 + 0.311134737521497 NA 5' UTR (NM_001081117, exon 1 of 14) 5' UTR (NM_001081117, exon 1 of 14) 115 NM_001081117 17345 Mm.4078 NM_001081117 ENSMUSG00000031004 Mki67 D630048A14Rik|Ki-67|Ki67 antigen identified by monoclonal antibody Ki 67 protein-coding unique_peak2_29_174_-0.0425546792346259_7.42993377221502_0.311130094946129 chr11 52326691 52327670 + 0.311130094946129 NA Intergenic RLTR18|LTR|ERVK -33682 NM_011694 22333 Mm.3555 NM_011694 ENSMUSG00000020402 Vdac1 AL033343|Vdac5|mVDAC1|mVDAC5 voltage-dependent anion channel 1 protein-coding common_peak1_29_174_-0.0425546792346259_7.42993377221502_0.311130094946129 chr8 69943183 69943889 + 0.311130094946129 NA intron (NM_001286450, intron 2 of 12) intron (NM_001286450, intron 2 of 12) 30847 NM_001113346 234366 Mm.270044 NM_145596 ENSMUSG00000036180 Gatad2a 1110066C11Rik|BC031407|C80248 GATA zinc finger domain containing 2A protein-coding unique_peak2_29_174_-0.0425546792346259_7.42993377221502_0.311130094946129-2 chr9 62932306 62933686 + 0.311130094946129 NA intron (NM_019663, intron 2 of 13) intron (NM_019663, intron 2 of 13) 47883 NM_019663 56469 Mm.431253 NM_019663 ENSMUSG00000032405 Pias1 2900068C24Rik|Ddxbp1|GBP protein inhibitor of activated STAT 1 protein-coding common_peak1_75_524_0.0174152132161183_9.04488121916154_0.31111558133102 chr19 38836588 38837541 + 0.31111558133102 NA exon (NM_145952, exon 1 of 13) exon (NM_145952, exon 1 of 13) 485 NM_145952 209478 Mm.391153 NM_145952 ENSMUSG00000048720 Tbc1d12 BC033574 TBC1D12: TBC1 domain family, member 12 protein-coding common_peak1_43_267_0.0203208634225351_8.07624962216904_0.311101904541266 chr19 4219031 4219898 + 0.311101904541266 NA intron (NM_001310038, intron 2 of 3) ID4|SINE|ID 5075 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak1_43_267_0.0203208634225351_8.07624962216904_0.311101904541266-2 chr2 170205200 170205743 + 0.311101904541266 NA Intergenic Intergenic -62796 NM_001159683 228913 Mm.22858 NM_001033299 ENSMUSG00000052056 Zfp217 4933431C08Rik|AW987152|Gm562|ZABC1|Znf217 zinc finger protein 217 protein-coding common_peak2_385_3919_-0.00722033536995781_11.9330277713176_0.311055603939283 chr7 127283531 127290293 + 0.311055603939283 NA Intergenic Intergenic -9348 NM_001253873 16408 Mm.1618 NM_008400 ENSMUSG00000030830 Itgal (p180)|Cd11a|LFA-1|LFA-1A|Ly-15|Ly-21 integrin alpha L protein-coding common_peak2_182_1573_-0.0115658583072307_10.6144368963539_0.311007429966395 chr13 98316053 98317764 + 0.311007429966395 NA promoter-TSS (NM_001170540) promoter-TSS (NM_001170540) 59 NM_145455 218490 Mm.371688 NM_145455 ENSMUSG00000021660 Btf3 1700054E11Rik basic transcription factor 3 protein-coding common_peak2_135_1095_-0.0146588884272862_10.0907026387469_0.310990913208564 chr11 96064065 96066166 + 0.310990913208564 NA exon (NM_172300, exon 1 of 7) exon (NM_172300, exon 1 of 7) 249 NM_172300 268470 Mm.38802 NM_172300 ENSMUSG00000014349 Ube2z AW049199|C030047H17Rik|D11Moh35 ubiquitin-conjugating enzyme E2Z protein-coding common_peak1_75_538_-0.0205526369829023_9.06386514426105_0.310983495053447 chr13 101736045 101736898 + 0.310983495053447 NA intron (NM_001077495, intron 2 of 15) intron (NM_001077495, intron 2 of 15) 31746 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak2_58_396_-0.0274687921011321_8.61926080109239_0.310975767416127 chr19 9115763 9117480 + 0.310975767416127 NA intron (NM_025610, intron 4 of 6) intron (NM_025610, intron 4 of 6) 18945 NM_025610 66514 Mm.272847 NM_025610 ENSMUSG00000024654 Asrgl1 2410004D18Rik|ALP|ALP1|AU040643|AW060375 asparaginase like 1 protein-coding common_peak1_30_173_0.0237387088855785_7.45481285029152_0.310956942782269 chr18 80689456 80690157 + 0.310956942782269 NA intron (NM_198429, intron 2 of 9) intron (NM_198429, intron 2 of 9) 18367 NM_001164111 18018 Mm.329560 NM_016791 ENSMUSG00000033016 Nfatc1 2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 protein-coding common_peak2_30_173_0.0237387088855785_7.45481285029152_0.310956942782269 chr16 33750796 33751744 + 0.310956942782269 NA intron (NM_175256, intron 12 of 14) intron (NM_175256, intron 12 of 14) -42767 NM_010739 17063 Mm.3177 NM_010739 ENSMUSG00000022824 Muc13 114/A10|14/A10|AI159736|Lrrp|Ly64|NJ-1 mucin 13, epithelial transmembrane protein-coding unique_peak2_18_100_-0.0578472793549043_6.62928784307434_0.310950811460187-3 chr7 44869196 44870086 + 0.310950811460187 NA 5' UTR (NM_133949, exon 1 of 12) 5' UTR (NM_133949, exon 1 of 12) 147 NM_133949 84113 Mm.42855 NM_133949 ENSMUSG00000038502 Ptov1 1110030G05Rik|AU041779|Gcap3 prostate tumor over expressed gene 1 protein-coding common_peak1_18_100_-0.0578472793549043_6.62928784307434_0.310950811460187-4 chr5 142445396 142445827 + 0.310950811460187 NA intron (NM_199068, intron 2 of 8) intron (NM_199068, intron 2 of 8) -18320 NM_172725 231855 Mm.78250 NM_172725 ENSMUSG00000039623 Ap5z1 C330006K01Rik adaptor-related protein complex 5, zeta 1 subunit protein-coding unique_peak2_18_100_-0.0578472793549043_6.62928784307434_0.310950811460187-2 chr3 107316514 107317477 + 0.310950811460187 NA Intergenic Intergenic 16294 NM_001045807 229700 Mm.27966 NM_001045807 ENSMUSG00000048109 Rbm15 C230088J01Rik|mKIAA1438 RNA binding motif protein 15 protein-coding common_peak2_18_100_-0.0578472793549043_6.62928784307434_0.310950811460187 chr12 26459647 26460307 + 0.310950811460187 NA Intergenic Intergenic -3525 NM_021384 58185 Mm.24045 NM_021384 ENSMUSG00000020641 Rsad2 2510004L01Rik|Vig1|cig5 radical S-adenosyl methionine domain containing 2 protein-coding common_peak1_18_100_-0.0578472793549043_6.62928784307434_0.310950811460187-3 chr16 92709940 92710372 + 0.310950811460187 NA intron (NM_001111022, intron 2 of 6) intron (NM_001111022, intron 2 of 6) -12827 NM_009821 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_18_100_-0.0578472793549043_6.62928784307434_0.310950811460187-2 chr15 99645990 99646855 + 0.310950811460187 NA intron (NM_012025, intron 1 of 17) B1F|SINE|Alu 5234 NM_001253808 26934 Mm.273804 NM_012025 ENSMUSG00000023015 Racgap1 AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478 Rac GTPase-activating protein 1 protein-coding common_peak1_18_100_-0.0578472793549043_6.62928784307434_0.310950811460187 chr13 19190368 19190883 + 0.310950811460187 NA Intergenic Intergenic 205188 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak1_18_100_-0.0578472793549043_6.62928784307434_0.310950811460187-5 chr7 72312908 72313349 + 0.310950811460187 NA Intergenic (TG)n|Simple_repeat|Simple_repeat -6533 NM_001024703 244049 Mm.217412 NM_001024703 ENSMUSG00000032776 Mctp2 Gm489 multiple C2 domains, transmembrane 2 protein-coding unique_peak2_18_100_-0.0578472793549043_6.62928784307434_0.310950811460187 chr15 82163637 82164394 + 0.310950811460187 NA intron (NM_033218, intron 1 of 18) B3A|SINE|B2 16746 NM_033218 20788 Mm.9002 NM_033218 ENSMUSG00000022463 Srebf2 AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc sterol regulatory element binding factor 2 protein-coding common_peak1_18_100_-0.0578472793549043_6.62928784307434_0.310950811460187-2 chr14 118940008 118940496 + 0.310950811460187 NA intron (NM_008929, intron 1 of 11) intron (NM_008929, intron 1 of 11) 2320 NM_008929 100037258 Mm.12616 NM_008929 ENSMUSG00000022136 Dnajc3 AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK DnaJ heat shock protein family (Hsp40) member C3 protein-coding common_peak2_76_533_0.0160256090855118_9.06870873623031_0.31094638921621 chr19 12832979 12834707 + 0.31094638921621 NA TTS (NM_134152) TTS (NM_134152) -27934 NM_146702 258697 Mm.223132 NM_146702 ENSMUSG00000046272 Olfr1444 MOR202-4 olfactory receptor 1444 protein-coding common_peak2_59_392_0.0168832415254538_8.62682712302133_0.31092540810728 chr14 121164114 121165759 + 0.31092540810728 NA intron (NM_134082, intron 2 of 26) intron (NM_134082, intron 2 of 26) 129362 NM_134082 223254 Mm.223980 NM_134082 ENSMUSG00000025555 Farp1 AW228844|BC030329|Cdep FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding common_peak2_209_1862_-0.011219417078463_10.8578022504024_0.310918963265471 chr11 60776068 60778511 + 0.310918963265471 NA promoter-TSS (NM_175491) promoter-TSS (NM_175491) 76 NM_009410 21975 Mm.10708 NM_009410 ENSMUSG00000002814 Top3a - topoisomerase (DNA) III alpha protein-coding common_peak2_95_700_0.0137294564541843_9.46013536223771_0.310900377906247 chr2 68470621 68472733 + 0.310900377906247 NA exon (NM_016866, exon 1 of 18) exon (NM_016866, exon 1 of 18) 304 NM_016866 53416 Mm.198414 NM_016866 ENSMUSG00000027030 Stk39 AW227544|AW556857|DCHT|RF005|Rnl5|SPAK serine/threonine kinase 39 protein-coding common_peak2_137_1095_0.0111755484726235_10.1036198571968_0.310900358787567 chr2 158408919 158411026 + 0.310900358787567 NA 5' UTR (NM_001291138, exon 1 of 30) 5' UTR (NM_001291138, exon 1 of 30) 119 NM_001291138 228850 Mm.398185 NM_177227 ENSMUSG00000027652 Ralgapb AI507211|B230339M05Rik|p170 Ral GTPase activating protein, beta subunit (non-catalytic) protein-coding common_peak2_137_1095_0.0111755484726235_10.1036198571968_0.310900358787567-2 chr5 137114994 137117009 + 0.310900358787567 NA intron (NM_201373, intron 1 of 2) C-rich|Low_complexity|Low_complexity 206 NM_201373 384309 Mm.100647 NM_201373 ENSMUSG00000043279 Trim56 A130009K11Rik|Gm452|RNF109 tripartite motif-containing 56 protein-coding common_peak1_211_1857_0.00943160143317101_10.8642505870992_0.310876509787242 chr10 88426603 88428217 + 0.310876509787242 NA intron (NM_001004164, intron 7 of 20) intron (NM_001004164, intron 7 of 20) -32177 NM_011517 20962 Mm.297977 NM_011517 ENSMUSG00000020059 Sycp3 Cor1|Scp3 synaptonemal complex protein 3 protein-coding common_peak2_44_274_0.02289082915261_8.11473322298833_0.31084691246729-2 chr8 84825192 84826483 + 0.31084691246729 NA intron (NR_033145, intron 1 of 1) B4A|SINE|B4 -3014 NM_201227 23863 Mm.304252 NM_201227 ENSMUSG00000053226 Dand5 Cerl-2|Cerr2|Dte|GREM3|coco DAN domain family member 5, BMP antagonist protein-coding common_peak2_44_274_0.02289082915261_8.11473322298833_0.31084691246729 chr4 97751140 97752392 + 0.31084691246729 NA intron (NM_001122952, intron 1 of 10) CpG -25860 NM_001122953 18027 Mm.31274 NM_010905 ENSMUSG00000028565 Nfia 1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A nuclear factor I/A protein-coding common_peak2_115_902_-0.0166942405955766_9.81023505718307_0.310828881576523 chr14 60128965 60132703 + 0.310828881576523 NA Intergenic MER34|LTR|ERV1 -44000 NM_015803 50769 Mm.319599 NM_015803 ENSMUSG00000021983 Atp8a2 AI415030|Atpc1b|agil|wl ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 protein-coding common_peak2_137_1115_-0.0149136803960364_10.1166644716312_0.310811435992301 chr2 119046327 119048070 + 0.310811435992301 NA promoter-TSS (NM_029617) promoter-TSS (NM_029617) 79 NM_029617 76464 Mm.202518 NM_029617 ENSMUSG00000027326 Knl1 2310043D08Rik|5730505K17Rik|Casc5 kinetochore scaffold 1 protein-coding common_peak2_212_1894_-0.0106880710581532_10.8826380975294_0.31075130858007 chr10 88378605 88381820 + 0.31075130858007 NA intron (NM_001004164, intron 1 of 20) intron (NM_001004164, intron 1 of 20) 800 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein-coding common_peak1_30_181_-0.0411124354643899_7.4872384224665_0.310735102224395-3 chr7 97400008 97400498 + 0.310735102224395 NA exon (NM_024220, exon 1 of 3) exon (NM_024220, exon 1 of 3) 250 NM_024220 68197 Mm.334031 NM_024220 ENSMUSG00000030647 Ndufc2 1810004I06Rik|2010300P09Rik|G1|R75094 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2 protein-coding common_peak1_30_181_-0.0411124354643899_7.4872384224665_0.310735102224395 chr1 131152901 131153531 + 0.310735102224395 NA promoter-TSS (NM_001136070) promoter-TSS (NM_001136070) 9 NM_010709 16865 Mm.276294 NM_010709 ENSMUSG00000026427 Eif2d D1Ertd5e|Lgtn eukaryotic translation initiation factor 2D protein-coding common_peak1_30_181_-0.0411124354643899_7.4872384224665_0.310735102224395-2 chr12 99642152 99642609 + 0.310735102224395 NA Intergenic Lx9|LINE|L1 -14406 NR_045288 73457 Mm.383439 NR_045288 ENSMUSG00000100211 1700064M15Rik - RIKEN cDNA 1700064M15 gene ncRNA common_peak1_19_100_0.0329227448789817_6.67467285519129_0.310657563702689-5 chr6 90678056 90678507 + 0.310657563702689 NA intron (NM_001134383, intron 4 of 13) intron (NM_001134383, intron 4 of 13) 38248 NM_001134383 232227 Mm.196943 NM_182784 ENSMUSG00000034312 Iqsec1 AW561907|BC026481|BRAG2|D6Ertd349e|cI-43 IQ motif and Sec7 domain 1 protein-coding common_peak1_19_100_0.0329227448789817_6.67467285519129_0.310657563702689-2 chr11 67578700 67579171 + 0.310657563702689 NA intron (NM_008088, intron 1 of 13) ID_B1|SINE|B4 -7565 NM_001109657 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_19_100_0.0329227448789817_6.67467285519129_0.310657563702689-4 chr2 69717005 69717458 + 0.310657563702689 NA Intergenic Intergenic -4625 NM_177244 320720 Mm.289566 NM_177244 ENSMUSG00000027086 Fastkd1 5330408N05Rik|mKIAA1800 FAST kinase domains 1 protein-coding common_peak1_19_100_0.0329227448789817_6.67467285519129_0.310657563702689 chr10 77534902 77535383 + 0.310657563702689 NA intron (NM_008404, intron 1 of 15) intron (NM_008404, intron 1 of 15) 4794 NM_008404 16414 Mm.1137 NM_008404 ENSMUSG00000000290 Itgb2 2E6|AI528527|Cd18|LAD|LCAMB|Lfa1|MF17 integrin beta 2 protein-coding common_peak1_19_100_0.0329227448789817_6.67467285519129_0.310657563702689-6 chr8 61305553 61306014 + 0.310657563702689 NA intron (NM_021506, intron 2 of 11) intron (NM_021506, intron 2 of 11) -16911 NR_045475 69279 Mm.417857 NR_045475 ENSMUSG00000099419 1700001D01Rik - RIKEN cDNA 1700001D01 gene ncRNA common_peak1_19_100_0.0329227448789817_6.67467285519129_0.310657563702689-3 chr12 112827895 112828361 + 0.310657563702689 NA intron (NM_028023, intron 1 of 1) ID_B1|SINE|B4 1261 NM_028023 71963 Mm.313185 NM_028023 ENSMUSG00000047832 Cdca4 2410018C03Rik|HEPP|SEI-3 cell division cycle associated 4 protein-coding unique_peak2_19_100_0.0329227448789817_6.67467285519129_0.310657563702689 chr12 25117956 25118704 + 0.310657563702689 NA Intergenic Intergenic -10844 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_19_100_0.0329227448789817_6.67467285519129_0.310657563702689-7 chrX 50578545 50579035 + 0.310657563702689 NA intron (NR_015505, intron 15 of 19) intron (NR_015505, intron 15 of 19) 41401 NR_131207 102639259 Mm.350898 NR_131207 Gm35612 - predicted gene, 35612 ncRNA common_peak2_139_1134_-0.0138062452820318_10.1415734595373_0.310646822536593 chr6 112860538 112862925 + 0.310646822536593 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 85535 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak2_78_550_0.0161905825421584_9.11400379984224_0.310641816545868 chr17 6947605 6949149 + 0.310641816545868 NA promoter-TSS (NM_001083945) promoter-TSS (NM_001083945) -21 NM_001083945 100037282 Mm.29830 NM_001083945 ENSMUSG00000023806 Rsph3b Rshl2b radial spoke 3B homolog (Chlamydomonas) protein-coding common_peak2_117_921_-0.0164842242011574_9.84038082832876_0.310625738811371 chr19 59942460 59944151 + 0.310625738811371 NA promoter-TSS (NM_001033172) promoter-TSS (NM_001033172) 59 NM_001033172 74998 Mm.24167 NM_001033172 ENSMUSG00000040022 Rab11fip2 4930470G04Rik|A830046J09Rik|AW558126|Nrip11 RAB11 family interacting protein 2 (class I) protein-coding common_peak1_937_11623_-0.00412686703129417_13.5027555541172_0.310608648433323 chr11 97140943 97147154 + 0.310608648433323 NA intron (NM_198100, intron 6 of 8) intron (NM_198100, intron 6 of 8) 2371 NR_106094 102466822 NR_106094 ENSMUSG00000099286 Mir7235 Gm27986|mmu-mir-7235 microRNA 7235 ncRNA common_peak2_60_412_-0.0254785203724737_8.67725871123321_0.310586683650734 chr13 63410105 63411951 + 0.310586683650734 NA intron (NM_007985, intron 1 of 14) intron (NM_007985, intron 1 of 14) 20717 NM_007985 14088 Mm.126106 NM_007985 ENSMUSG00000021461 Fancc Facc Fanconi anemia, complementation group C protein-coding unique_peak2_31_180_0.0230196872283184_7.51135573069736_0.310575121446667 chr11 118014024 118015491 + 0.310575121446667 NA intron (NM_133757, intron 8 of 9) intron (NM_133757, intron 8 of 9) 12487 NR_105898 102466768 NR_105898 ENSMUSG00000098958 Mir6933 Gm27856|mmu-mir-6933 microRNA 6933 ncRNA common_peak1_31_180_0.0230196872283184_7.51135573069736_0.310575121446667 chr9 44137945 44138598 + 0.310575121446667 NA intron (NM_023061, intron 5 of 15) MER20|DNA|hAT-Charlie 3613 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding common_peak2_45_282_0.0204148724479829_8.15486567905587_0.310570858389424 chr13 94788704 94789708 + 0.310570858389424 NA intron (NM_009321, intron 1 of 3) CpG 263 NM_009321 21371 Mm.379025 NM_009321 ENSMUSG00000042043 Tbca Tbca13 tubulin cofactor A protein-coding common_peak1_246_2242_0.00815521338545189_11.135291511779_0.310492185066238 chr4 62683443 62686547 + 0.310492185066238 NA intron (NM_001310706, intron 1 of 6) intron (NM_001310706, intron 1 of 6) 11021 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_192_1655_0.00931833494693457_10.6981461249728_0.310442780342071 chr19 9982572 9983692 + 0.310442780342071 NA intron (NR_073181, intron 2 of 4) intron (NR_073181, intron 2 of 4) 486 NM_010239 14319 Mm.1776 NM_010239 ENSMUSG00000024661 Fth1 FHC|Fth|HFt|MFH ferritin heavy polypeptide 1 protein-coding common_peak1_98_743_-0.0177043472938667_9.5303066374611_0.31043289910222 chr11 106703946 106705427 + 0.31043289910222 NA intron (NM_001305158, intron 2 of 14) intron (NM_001305158, intron 2 of 14) 10595 NM_001305158 18613 Mm.343951 NM_008816 ENSMUSG00000020717 Pecam1 C85791|Cd31|PECAM-1|Pecam platelet/endothelial cell adhesion molecule 1 protein-coding common_peak1_45_292_-0.0296837391423832_8.17991498485106_0.310406072517519 chr9 44497972 44498574 + 0.310406072517519 NA promoter-TSS (NM_030256) promoter-TSS (NM_030256) -863 NM_030256 80288 Mm.370270 NM_030256 ENSMUSG00000063382 Bcl9l B9L|BC003321|BCL9-2|DLNB11 B cell CLL/lymphoma 9-like protein-coding common_peak2_45_292_-0.0296837391423832_8.17991498485106_0.310406072517519 chr7 18909770 18911215 + 0.310406072517519 NA promoter-TSS (NM_001033314) promoter-TSS (NM_001033314) -88 NM_001033314 232933 Mm.333624 NM_001033314 ENSMUSG00000074358 Ccdc61 C530028I08Rik|Gm159 coiled-coil domain containing 61 protein-coding unique_peak2_19_106_-0.0503327587703701_6.71630060701596_0.310381154924136-2 chrX 167157432 167158263 + 0.310381154924136 NA Intergenic Intergenic 51371 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding common_peak1_19_106_-0.0503327587703701_6.71630060701596_0.310381154924136 chr1 43563098 43563544 + 0.310381154924136 NA intron (NM_010879, intron 4 of 4) intron (NM_010879, intron 4 of 4) 117570 NM_010879 17974 Mm.389903 NM_010879 ENSMUSG00000066877 Nck2 4833426I10Rik|Grb4|NCKbeta|Nck-2 non-catalytic region of tyrosine kinase adaptor protein 2 protein-coding unique_peak2_19_106_-0.0503327587703701_6.71630060701596_0.310381154924136 chr11 5426249 5427240 + 0.310381154924136 NA intron (NM_001080924, intron 1 of 8) intron (NM_001080924, intron 1 of 8) 18103 NM_001080924 407821 Mm.216313 NM_001080924 ENSMUSG00000041961 Znrf3 Gm1167 zinc and ring finger 3 protein-coding common_peak1_31_188_-0.0393768499095488_7.5425539992663_0.310369841925689-4 chr9 61671124 61671560 + 0.310369841925689 NA Intergenic Intergenic 243168 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik ribosomal protein, large, P1 protein-coding common_peak1_31_188_-0.0393768499095488_7.5425539992663_0.310369841925689 chr17 48299970 48300775 + 0.310369841925689 NA 5' UTR (NM_001033405, exon 1 of 5) 5' UTR (NM_001033405, exon 1 of 5) 334 NM_001033405 328833 Mm.329104 NM_001033405 ENSMUSG00000071068 Treml2 AW049306|Gm750|Tlt2 triggering receptor expressed on myeloid cells-like 2 protein-coding common_peak1_31_188_-0.0393768499095488_7.5425539992663_0.310369841925689-2 chr5 134610723 134611250 + 0.310369841925689 NA intron (NM_022964, intron 1 of 11) intron (NM_022964, intron 1 of 11) 4039 NM_022964 56743 Mm.391375 NM_020044 ENSMUSG00000040751 Lat2 AW125574|LAB|NTAL|WSCR5|Wbscr15|Wbscr5 linker for activation of T cells family, member 2 protein-coding common_peak1_31_188_-0.0393768499095488_7.5425539992663_0.310369841925689-3 chr8 13623370 13624011 + 0.310369841925689 NA intron (NM_009025, intron 2 of 23) intron (NM_009025, intron 2 of 23) 53897 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding common_peak2_46_290_0.0182557445177345_8.19400321516715_0.310309905272625 chr1 193337244 193339002 + 0.310309905272625 NA intron (NM_001277928, intron 18 of 22) L2b|LINE|L2 32159 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak1_46_290_0.0182557445177345_8.19400321516715_0.310309905272625 chr5 110652791 110653564 + 0.310309905272625 NA promoter-TSS (NM_027156) promoter-TSS (NM_027156) 205 NM_153570 100608 Mm.29960 NM_153570 ENSMUSG00000033294 Noc4l AI326906 NOC4 like protein-coding common_peak2_46_290_0.0182557445177345_8.19400321516715_0.310309905272625-2 chr2 121354571 121355445 + 0.310309905272625 NA Intergenic Intergenic -3633 NM_009897 12716 Mm.252145 NM_009897 ENSMUSG00000000308 Ckmt1 Mt-CK|ScCKmit|UbCKmit|mi-CK creatine kinase, mitochondrial 1, ubiquitous protein-coding common_peak1_310_3008_-0.00796900019927271_11.5510838912337_0.310294955591524 chr7 120698219 120701089 + 0.310294955591524 NA intron (NM_001164580, intron 1 of 2) L1MCb|LINE|L1 22034 NM_001164580 233812 Mm.276479 NM_001164580 ENSMUSG00000046096 BC030336 - cDNA sequence BC030336 protein-coding common_peak1_32_187_0.0227310959832421_7.56595439966926_0.310221584818895 chr17 34179464 34180034 + 0.310221584818895 NA Intergenic Intergenic 7581 NM_013585 16912 Mm.390983 NM_013585 ENSMUSG00000096727 Psmb9 Lmp-2|Lmp2 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) protein-coding common_peak2_101_754_0.0139502541013705_9.56730796126313_0.310197204056176 chr11 119927346 119929688 + 0.310197204056176 NA intron (NR_039557, intron 2 of 2) intron (NR_039557, intron 2 of 2) -14575 NM_001037754 108100 Mm.197534 NM_130862 ENSMUSG00000025372 Baiap2 IRSp53|R75030 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding common_peak2_63_424_0.0181588544728157_8.74039845826147_0.310183818834118 chr18 20878787 20881028 + 0.310183818834118 NA intron (NM_177038, intron 2 of 28) intron (NM_177038, intron 2 of 28) 16171 NM_177038 75964 Mm.273769 NM_029491 ENSMUSG00000033382 Trappc8 5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012 trafficking protein particle complex 8 protein-coding common_peak1_46_300_-0.0304885893336841_8.21837538209286_0.3101539367026 chr17 46680283 46680955 + 0.3101539367026 NA promoter-TSS (NM_010787) promoter-TSS (NM_010787) -164 NM_001277311 17256 Mm.329083 NM_010787 ENSMUSG00000002768 Mea1 Mea-1 male enhanced antigen 1 protein-coding common_peak2_81_590_-0.018958743925749_9.19753494821466_0.310100991367704 chr5 45519564 45521082 + 0.310100991367704 NA promoter-TSS (NM_025895) promoter-TSS (NM_025895) 94 NM_025895 66999 Mm.283045 NM_025895 ENSMUSG00000015804 Med28 1500003D12Rik|AI451633|AU045690|Eg1|FKSG20|magicin mediator complex subunit 28 protein-coding common_peak1_198_1719_0.00878894425795806_10.7525873217184_0.310093550953354 chr15 79687143 79688867 + 0.310093550953354 NA promoter-TSS (NM_028792) promoter-TSS (NM_028792) -133 NM_028792 74158 Mm.323393 NM_028792 ENSMUSG00000022426 Josd1 1300006C06Rik|mKIAA0063 Josephin domain containing 1 protein-coding common_peak2_47_297_0.0212192588162896_8.22977814987031_0.310093007462763 chr17 50189451 50191002 + 0.310093007462763 NA 5' UTR (NM_181397, exon 1 of 10) 5' UTR (NM_181397, exon 1 of 10) 271 NM_181397 76438 Mm.41854 NM_181397 ENSMUSG00000039316 Rftn1 2310015N21Rik|AI853526 raftlin lipid raft linker 1 protein-coding common_peak2_102_764_0.0122319461967244_9.58543191067838_0.310077838276637 chr19 24970602 24972747 + 0.310077838276637 NA Intergenic Intergenic -10058 NM_146097 226043 Mm.272127 NM_146097 ENSMUSG00000024878 Cbwd1 AV349248|BC018472 COBW domain containing 1 protein-coding common_peak2_82_585_0.0147490147460996_9.2021313617953_0.310070163491547 chr5 45668763 45670586 + 0.310070163491547 NA promoter-TSS (NR_073433) promoter-TSS (NR_073433) 34 NR_073433 69788 Mm.381492 NR_073433 ENSMUSG00000104986 1600023N17Rik AV119442 RIKEN cDNA 1600023N17 gene ncRNA unique_peak2_20_107_0.0225871416350296_6.76618107298098_0.310036389339139-2 chr18 67435699 67436481 + 0.310036389339139 NA intron (NM_027130, intron 5 of 16) RMER10A|LTR|ERVL 13046 NM_027130 69597 Mm.426052 NM_027130 ENSMUSG00000024527 Afg3l2 2310036I02Rik|AW260507|Emv66|par AFG3-like AAA ATPase 2 protein-coding common_peak1_20_107_0.0225871416350296_6.76618107298098_0.310036389339139-2 chr13 33007842 33008296 + 0.310036389339139 NA exon (NM_009256, exon 3 of 7) exon (NM_009256, exon 3 of 7) 3528 NM_009256 20723 Mm.245041 NM_009256 ENSMUSG00000045827 Serpinb9 BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 9 protein-coding common_peak1_20_107_0.0225871416350296_6.76618107298098_0.310036389339139 chr1 182362308 182362819 + 0.310036389339139 NA Intergenic Intergenic -20957 NM_175127 67948 Mm.30737 NM_175127 ENSMUSG00000047539 Fbxo28 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 F-box protein 28 protein-coding common_peak1_20_107_0.0225871416350296_6.76618107298098_0.310036389339139-4 chr4 137890926 137891348 + 0.310036389339139 NA intron (NM_199307, intron 1 of 19) intron (NM_199307, intron 1 of 19) 28900 NM_199307 230857 Mm.401062 NM_199307 ENSMUSG00000057530 Ece1 AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d endothelin converting enzyme 1 protein-coding unique_peak2_20_107_0.0225871416350296_6.76618107298098_0.310036389339139 chr1 13513621 13514414 + 0.310036389339139 NA Intergenic MuRRS-int|LTR|ERV1 75893 NM_028173 72265 Mm.28765 NM_028173 ENSMUSG00000025935 Tram1 1810049E02Rik|TRAMP translocating chain-associating membrane protein 1 protein-coding common_peak1_20_107_0.0225871416350296_6.76618107298098_0.310036389339139-3 chr19 4262998 4263485 + 0.310036389339139 NA TTS (NR_105951) TTS (NR_105951) 637 NR_105951 102465595 NR_105951 ENSMUSG00000099290 Mir6985 Gm27719|mmu-mir-6985 microRNA 6985 ncRNA common_peak2_32_195_-0.0373898964543287_7.59601489588804_0.310031078670234-2 chr7 126481801 126483237 + 0.310031078670234 NA Intergenic Intergenic -4836 NM_172745 233870 Mm.197829 NM_172745 ENSMUSG00000073838 Tufm 2300002G02Rik|C76308|C76389|EF-TuMT|EFTU Tu translation elongation factor, mitochondrial protein-coding common_peak1_32_195_-0.0373898964543287_7.59601489588804_0.310031078670234-3 chr14 73115107 73115774 + 0.310031078670234 NA Intergenic Intergenic -27070 NM_001170694 105670 Mm.280068 NM_134083 ENSMUSG00000022106 Rcbtb2 2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 protein-coding common_peak1_32_195_-0.0373898964543287_7.59601489588804_0.310031078670234-4 chr5 120138757 120139286 + 0.310031078670234 NA intron (NM_028762, intron 16 of 23) intron (NM_028762, intron 16 of 23) 242 NR_045793 100503427 Mm.446834 NR_045793 ENSMUSG00000097368 Gm10390 ENSMUSG00000072671 predicted gene 10390 ncRNA common_peak1_32_195_-0.0373898964543287_7.59601489588804_0.310031078670234-5 chr8 75109487 75110030 + 0.310031078670234 NA exon (NM_008566, exon 2 of 17) exon (NM_008566, exon 2 of 17) 249 NM_008566 17218 Mm.5048 NM_008566 ENSMUSG00000005410 Mcm5 AA617332|AI324988|AL033333|Cdc46|Mcmd5|P1-CDC46 minichromosome maintenance complex component 5 protein-coding common_peak1_32_195_-0.0373898964543287_7.59601489588804_0.310031078670234-2 chr13 93989750 93990464 + 0.310031078670234 NA Intergenic Intergenic -67689 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak2_32_195_-0.0373898964543287_7.59601489588804_0.310031078670234 chr5 103691466 103692939 + 0.310031078670234 NA Intergenic CpG -36470 NM_001163550 74218 Mm.159141 NM_028824 ENSMUSG00000029320 1700016H13Rik - RIKEN cDNA 1700016H13 gene protein-coding common_peak1_32_195_-0.0373898964543287_7.59601489588804_0.310031078670234 chr13 18717209 18717702 + 0.310031078670234 NA intron (NM_172120, intron 1 of 28) intron (NM_172120, intron 1 of 28) 163 NM_172120 218035 Mm.27389 NM_172120 ENSMUSG00000041236 Vps41 AI317346|Vam2|mVam2 VPS41 HOPS complex subunit protein-coding common_peak1_198_1743_-0.0112025309295092_10.7625830593122_0.310030935466501 chr5 122130779 122132485 + 0.310030935466501 NA intron (NM_183307, intron 2 of 12) intron (NM_183307, intron 2 of 12) 3261 NM_001289811 330188 Mm.386907 NM_183307 ENSMUSG00000043036 Ccdc63 4921511C16Rik coiled-coil domain containing 63 protein-coding common_peak1_64_433_0.0153632878884178_8.76923287638869_0.309994860755215 chr3 8666927 8667990 + 0.309994860755215 NA promoter-TSS (NM_010423) promoter-TSS (NM_010423) -420 NM_010423 15213 Mm.29581 NM_010423 ENSMUSG00000040289 Hey1 AI316788|AI414254|CHF2|HRT1|Herp2|Hesr1|bHLHb31|hesr-1 hairy/enhancer-of-split related with YRPW motif 1 protein-coding common_peak2_64_433_0.0153632878884178_8.76923287638869_0.309994860755215 chr16 37653555 37654972 + 0.309994860755215 NA exon (NM_026610, exon 1 of 3) exon (NM_026610, exon 1 of 3) 105 NM_026610 68194 Mm.379154 NM_026610 ENSMUSG00000022820 Ndufb4 0610006N12Rik|1300010H20Rik NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4 protein-coding common_peak2_102_780_-0.0176308543652404_9.60036331095936_0.309984560718111 chr1 75217881 75219991 + 0.309984560718111 NA intron (NM_001313724, intron 1 of 2) intron (NM_001313724, intron 1 of 2) 358 NM_001313723 22145 Mm.1155 NM_009447 ENSMUSG00000026202 Tuba4a M[a]4|Tuba4 tubulin, alpha 4A protein-coding common_peak1_125_979_0.0115835321355675_9.94242970507035_0.309972033228902 chr18 67640885 67641990 + 0.309972033228902 NA promoter-TSS (NM_134138) promoter-TSS (NM_134138) -101 NM_001081073 225659 Mm.111928 NM_001081073 ENSMUSG00000073542 Cep76 6230425F05Rik|9630013E05 centrosomal protein 76 protein-coding common_peak1_47_307_-0.0263987614164503_8.25358715998668_0.309944186163116 chr6 129584008 129584909 + 0.309944186163116 NA intron (NM_153590, intron 6 of 6) RMER13B|LTR|ERVK 6172 NM_153590 243655 Mm.30968 NM_153590 ENSMUSG00000050241 Klre1 Klre-1|NKG2I killer cell lectin-like receptor family E member 1 protein-coding common_peak1_148_1223_-0.0124628405850302_10.2511564224001_0.309944111050468 chr7 66200223 66202183 + 0.309944111050468 NA Intergenic Intergenic 91688 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak1_201_1751_0.00867344519063806_10.7791237821965_0.309928477015573 chrX 151519837 151521798 + 0.309928477015573 NA 5' UTR (NM_001113354, exon 1 of 22) 5' UTR (NM_001113354, exon 1 of 22) 145 NM_001113354 320595 Mm.17156 NM_177201 ENSMUSG00000041229 Phf8 9830141C09Rik|mKIAA1111 PHD finger protein 8 protein-coding common_peak1_354_3537_-0.00745319996511995_11.7849917327079_0.309922671492521 chr10 39369756 39372547 + 0.309922671492521 NA intron (NM_008054, intron 1 of 13) intron (NM_008054, intron 1 of 13) 1352 NM_001122893 14360 Mm.4848 NM_008054 ENSMUSG00000019843 Fyn AI448320|AW552119 Fyn proto-oncogene protein-coding common_peak1_10_48_0.0184755873923876_5.6239476378114_0.309893763698769 chr1 21355778 21356099 + 0.309893763698769 NA Intergenic B1_Mus1|SINE|Alu 6261 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak1_33_194_0.0228182584109167_7.61873944295507_0.309893302172489 chr19 29100537 29101125 + 0.309893302172489 NA promoter-TSS (NM_021525) promoter-TSS (NM_021525) -544 NM_021525 59028 Mm.28630 NM_021525 ENSMUSG00000024785 Rcl1 2310040A02Rik|AI789745|C76567|RPCL1|Rnac RNA terminal phosphate cyclase-like 1 protein-coding common_peak1_290_2773_-0.00827919280690992_11.4336124759201_0.309863513855537 chr4 63384538 63387352 + 0.309863513855537 NA intron (NM_001305432, intron 5 of 20) intron (NM_001305432, intron 5 of 20) 12295 NM_001305432 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak1_48_305_0.0194883942180333_8.26713203980167_0.309857216525453 chr10 41937470 41938272 + 0.309857216525453 NA intron (NM_001034858, intron 12 of 17) GA-rich|Low_complexity|Low_complexity 50432 NM_001013370 140742 Mm.139418 NM_001013370 ENSMUSG00000038332 Sesn1 1110002G11Rik|AU044290|Pa26|Sest1 sestrin 1 protein-coding common_peak1_65_441_0.0160296994558049_8.79591740911933_0.309833329173914-2 chr15 27708872 27709955 + 0.309833329173914 NA Intergenic Intergenic -27871 NM_001242423 223433 Mm.266485 NM_198301 ENSMUSG00000056069 Fam105a 9830126M18 family with sequence similarity 105, member A protein-coding common_peak1_65_441_0.0160296994558049_8.79591740911933_0.309833329173914 chr13 67268588 67269350 + 0.309833329173914 NA promoter-TSS (NM_001001152) promoter-TSS (NM_001001152) 99 NM_001001152 238690 Mm.306358 NM_001001152 ENSMUSG00000055480 Zfp458 BC062958|Rslcan-7|Znf728|mszf59-2 zinc finger protein 458 protein-coding common_peak2_127_998_0.0117493288918187_9.97021553223833_0.309802557052413 chr7 89251940 89255105 + 0.309802557052413 NA intron (NM_028343, intron 4 of 14) ORR1F|LTR|ERVL-MaLR 85265 NM_028343 72759 Mm.208477 NM_028343 ENSMUSG00000039428 Tmem135 2810439K08Rik|AW319712|PMP52 transmembrane protein 135 protein-coding unique_peak2_20_113_-0.0554153703662434_6.80518232898162_0.309794050023144 chr1 131079971 131081053 + 0.309794050023144 NA intron (NM_008551, intron 1 of 9) intron (NM_008551, intron 1 of 9) 17331 NM_008551 17164 Mm.221235 NM_008551 ENSMUSG00000016528 Mapkapk2 AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1 MAP kinase-activated protein kinase 2 protein-coding unique_peak2_20_113_-0.0554153703662434_6.80518232898162_0.309794050023144-2 chr12 31996334 31997120 + 0.309794050023144 NA intron (NM_011158, intron 2 of 10) intron (NM_011158, intron 2 of 10) -46192 NM_153198 73389 Mm.390461 NM_153198 ENSMUSG00000002996 Hbp1 1700058O05Rik|BE629963|C330012F01Rik|C86454 high mobility group box transcription factor 1 protein-coding common_peak1_20_113_-0.0554153703662434_6.80518232898162_0.309794050023144-2 chr13 112002559 112003122 + 0.309794050023144 NA Intergenic Intergenic 134904 NR_130345 102636620 Mm.402328 NR_130345 ENSMUSG00000086111 Gm15326 OTTMUSG00000020187 predicted gene 15326 ncRNA common_peak1_20_113_-0.0554153703662434_6.80518232898162_0.309794050023144 chr13 55104791 55105174 + 0.309794050023144 NA promoter-TSS (NM_012017) promoter-TSS (NM_012017) -327 NM_012017 26919 Mm.22795 NM_012017 ENSMUSG00000021481 Zfp346 Jaz|Znf346 zinc finger protein 346 protein-coding common_peak1_20_113_-0.0554153703662434_6.80518232898162_0.309794050023144-3 chr2 22812171 22812640 + 0.309794050023144 NA intron (NM_019456, intron 1 of 13) intron (NM_019456, intron 1 of 13) 38078 NM_019456 54519 Mm.14255 NM_019456 ENSMUSG00000026786 Apbb1ip 9930118P07Rik|Prp48 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein-coding unique_peak2_20_113_-0.0554153703662434_6.80518232898162_0.309794050023144-3 chr12 98249984 98250550 + 0.309794050023144 NA intron (NM_008079, intron 5 of 16) Lx9|LINE|L1 9192 NM_008079 14420 Mm.5120 NM_008079 ENSMUSG00000021003 Galc 2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher galactosylceramidase protein-coding common_peak1_262_2422_0.00786232982411583_11.2465098543634_0.309790991576235 chr14 121877913 121879549 + 0.309790991576235 NA promoter-TSS (NR_131002) promoter-TSS (NR_131002) 125 NM_026861 68889 Mm.441151 NM_026861 ENSMUSG00000041765 Ubac2 1190008A14Rik|AW554959|Phgdhl1 ubiquitin associated domain containing 2 protein-coding common_peak1_104_798_-0.0164714622511575_9.6338159618024_0.309781558766172 chr17 57247856 57249095 + 0.309781558766172 NA promoter-TSS (NM_001308072) promoter-TSS (NM_001308072) -786 NM_030084 78308 Mm.28468 NM_030084 ENSMUSG00000005823 Gpr108 1810015L19Rik|AA589464|C79132|Lustr2 G protein-coupled receptor 108 protein-coding common_peak1_33_202_-0.0351873450246494_7.64774224467285_0.309716030072816 chr15 78479590 78480237 + 0.309716030072816 NA TTS (NM_008368) TTS (NM_008368) -11279 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding unique_peak2_33_202_-0.0351873450246494_7.64774224467285_0.309716030072816 chr2 45054217 45055980 + 0.309716030072816 NA intron (NM_001289521, intron 1 of 8) intron (NM_001289521, intron 1 of 8) -31921 NR_039591 100628598 NR_039591 ENSMUSG00000092679 Mir5129 mir-5129|mmu-mir-5129|mu-mir-5129 microRNA 5129 ncRNA common_peak1_48_315_-0.0269045112664177_8.29032849254389_0.309715977954005 chr4 122878152 122879160 + 0.309715977954005 NA intron (NM_007598, intron 1 of 12) intron (NM_007598, intron 1 of 12) 7401 NM_007598 12331 Mm.8687 NM_007598 ENSMUSG00000028656 Cap1 - CAP, adenylate cyclase-associated protein 1 (yeast) protein-coding common_peak2_48_315_-0.0269045112664177_8.29032849254389_0.309715977954005 chr6 108064808 108065800 + 0.309715977954005 NA intron (NM_178391, intron 1 of 1) intron (NM_178391, intron 1 of 1) 259 NM_178391 74729 Mm.56539 NM_178391 ENSMUSG00000034639 Setmar 5830404F24Rik|Etet2 SET domain without mariner transposase fusion protein-coding common_peak1_177_1520_-0.0111737577739532_10.5652175588375_0.309704434063235 chr8 8689474 8690569 + 0.309704434063235 NA TTS (NR_106114) TTS (NR_106114) 141 NR_106114 102465762 NR_106114 ENSMUSG00000098917 Mir7654 Gm27748|mmu-mir-7654 microRNA 7654 ncRNA common_peak2_105_807_-0.0158574061223273_9.65028277969063_0.309683470692302 chr17 85089603 85091531 + 0.309683470692302 NA promoter-TSS (NM_001163622) promoter-TSS (NM_001163622) -133 NM_028576 73582 Mm.260753 NM_028576 ENSMUSG00000071037 Camkmt 1700106N22Rik|AI480743|AV099781|CLNMT|CaM KMT calmodulin-lysine N-methyltransferase protein-coding common_peak1_66_449_0.0167625089326862_8.82216244568338_0.309677515652711 chr16 11448830 11449648 + 0.309677515652711 NA intron (NM_001290148, intron 6 of 13) URR1B|DNA|hAT-Charlie 43591 NM_001290148 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak2_106_800_0.0133119869470626_9.65231442588224_0.309672707575088 chr11 102284790 102285930 + 0.309672707575088 NA 5' UTR (NM_001302505, exon 1 of 3) 5' UTR (NM_001302505, exon 1 of 3) 421 NM_001302505 72053 Mm.101274 NM_028076 ENSMUSG00000034757 Tmub2 2010008E23Rik transmembrane and ubiquitin-like domain containing 2 protein-coding common_peak2_207_1815_0.00870969090908602_10.8309033327455_0.30961573406826 chr5 23386367 23388430 + 0.30961573406826 NA Intergenic Intergenic 46955 NR_040469 269630 Mm.425231 NR_040469 ENSMUSG00000073147 5031425E22Rik - RIKEN cDNA 5031425E22 gene ncRNA common_peak1_207_1815_0.00870969090908602_10.8309033327455_0.30961573406826 chr10 21993861 21995637 + 0.30961573406826 NA promoter-TSS (NM_011361) promoter-TSS (NM_011361) 83 NM_011361 20393 Mm.28405 NM_011361 ENSMUSG00000019970 Sgk1 Sgk serum/glucocorticoid regulated kinase 1 protein-coding common_peak1_34_201_0.0232342317717391_7.66982859863766_0.309587660847422 chr4 129827748 129828607 + 0.309587660847422 NA intron (NM_001164745, intron 1 of 5) intron (NM_001164745, intron 1 of 5) 7469 NM_001164745 19244 Mm.193688 NM_008974 ENSMUSG00000028788 Ptp4a2 Prl-2 protein tyrosine phosphatase 4a2 protein-coding common_peak2_34_201_0.0232342317717391_7.66982859863766_0.309587660847422 chr6 58880497 58881543 + 0.309587660847422 NA intron (NM_028705, intron 15 of 24) RMER1C|Other|Other 26106 NM_021432 58243 Mm.389747 NM_021432 ENSMUSG00000055430 Nap1l5 1110020M21Rik nucleosome assembly protein 1-like 5 protein-coding common_peak2_154_1264_0.00986612203095483_10.3098547305971_0.309585858658608 chr15 76326437 76328506 + 0.309585858658608 NA promoter-TSS (NM_175399) promoter-TSS (NM_175399) 74 NM_175399 109075 Mm.322752 NM_175399 ENSMUSG00000034259 Exosc4 1110039I09Rik|1500001N04Rik|Rrp41 exosome component 4 protein-coding common_peak1_21_113_0.0269077285292099_6.84634387842935_0.309564410830305-4 chr6 112889931 112890358 + 0.309564410830305 NA intron (NM_080448, intron 1 of 21) intron (NM_080448, intron 1 of 21) 57122 NM_080448 259302 Mm.236401 NM_080448 ENSMUSG00000030257 Srgap3 AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411 SLIT-ROBO Rho GTPase activating protein 3 protein-coding common_peak1_21_113_0.0269077285292099_6.84634387842935_0.309564410830305-3 chr4 133630152 133630657 + 0.309564410830305 NA intron (NM_001017968, intron 1 of 7) intron (NM_001017968, intron 1 of 7) 3025 NM_001017968 503610 Mm.331948 NM_001017968 ENSMUSG00000037553 Zdhhc18 - zinc finger, DHHC domain containing 18 protein-coding common_peak1_21_113_0.0269077285292099_6.84634387842935_0.309564410830305-2 chr16 55555489 55555934 + 0.309564410830305 NA Intergenic Intergenic 60980 NR_039578 100628589 NR_039578 ENSMUSG00000093292 Mir5118 mmu-mir-5118|mu-mir-5118 microRNA 5118 ncRNA common_peak1_21_113_0.0269077285292099_6.84634387842935_0.309564410830305-5 chr7 34629491 34630025 + 0.309564410830305 NA Intergenic Intergenic 23083 NM_146188 233107 Mm.486198 NM_146188 ENSMUSG00000030499 Kctd15 BC031749 potassium channel tetramerisation domain containing 15 protein-coding common_peak1_21_113_0.0269077285292099_6.84634387842935_0.309564410830305 chr11 72207573 72208054 + 0.309564410830305 NA intron (NM_026559, intron 1 of 3) intron (NM_026559, intron 1 of 3) 259 NM_026559 52700 Mm.27670 NM_026559 ENSMUSG00000020803 Txndc17 4831443O22Rik|D11Ertd672e|TRP14|Txnl5 thioredoxin domain containing 17 protein-coding common_peak1_21_113_0.0269077285292099_6.84634387842935_0.309564410830305-6 chr8 91064835 91065324 + 0.309564410830305 NA Intergenic MTD|LTR|ERVL-MaLR -4978 NM_001282001 19651 Mm.235580 NM_011250 ENSMUSG00000031666 Rbl2 PRB2|RBR-2|Rb2|p130 retinoblastoma-like 2 protein-coding common_peak2_67_458_0.0144105399330758_8.84955561338035_0.309508689645068 chr11 80088653 80090099 + 0.309508689645068 NA promoter-TSS (NM_001029856) promoter-TSS (NM_001029856) -24 NM_001029856 237877 Mm.89551 NM_001029856 ENSMUSG00000017550 Atad5 C130052G03Rik|FRAG1|Gm17 ATPase family, AAA domain containing 5 protein-coding common_peak1_182_1550_0.00967099616416611_10.6038184691182_0.309475791518638 chr9 100642050 100643450 + 0.309475791518638 NA promoter-TSS (NM_009282) promoter-TSS (NM_009282) -873 NM_009282 20842 Mm.42135 NM_009282 ENSMUSG00000037286 Stag1 AU045003|SA-1|Scc3 stromal antigen 1 protein-coding common_peak1_34_209_-0.0327998031425887_7.69784561609483_0.309422290140045 chr4 132212316 132213001 + 0.309422290140045 NA promoter-TSS (NM_145393) promoter-TSS (NM_145393) -402 NM_145393 213541 Mm.23998 NM_145393 ENSMUSG00000040025 Ythdf2 9430020E02Rik|HGRG8|NY-REN-2 YTH domain family 2 protein-coding common_peak2_34_209_-0.0327998031425887_7.69784561609483_0.309422290140045 chr18 89197124 89198429 + 0.309422290140045 NA intron (NM_178687, intron 1 of 6) intron (NM_178687, intron 1 of 6) 349 NM_001039149 225825 Mm.139293 NM_178687 ENSMUSG00000034028 Cd226 BC051526|DNAM-1|DNAM1|Pta1|TLiSA1 CD226 antigen protein-coding common_peak1_34_209_-0.0327998031425887_7.69784561609483_0.309422290140045-2 chr6 129915826 129916462 + 0.309422290140045 NA Intergenic PB1D9|SINE|Alu -2920 NM_008463 16636 Mm.14111 NM_008463 ENSMUSG00000030173 Klra5 Ly49e killer cell lectin-like receptor, subfamily A, member 5 protein-coding common_peak1_50_321_0.0167538990128389_8.33929382762104_0.309420621722638 chr8 122317316 122318248 + 0.309420621722638 NA intron (NM_009569, intron 3 of 9) intron (NM_009569, intron 3 of 9) 35641 NM_009569 22761 Mm.3105 NM_009569 ENSMUSG00000049577 Zfpm1 FOG|Fog1 zinc finger protein, multitype 1 protein-coding common_peak2_50_321_0.0167538990128389_8.33929382762104_0.309420621722638 chr15 83434040 83436009 + 0.309420621722638 NA intron (NM_001159509, intron 1 of 10) intron (NM_001159509, intron 1 of 10) -2174 NM_001159510 23970 Mm.23978 NM_011862 ENSMUSG00000016664 Pacsin2 AI197433 protein kinase C and casein kinase substrate in neurons 2 protein-coding common_peak1_67_470_-0.0228223662659008_8.86817206647983_0.309399754166789 chr12 25863635 25864990 + 0.309399754166789 NA Intergenic Intergenic 346193 NR_131149 629481 Mm.390460 NR_131149 Gm29687 - predicted gene, 29687 ncRNA common_peak1_21_119_-0.0470928529145676_6.88334416915123_0.309346498875258 chr13 53066591 53067173 + 0.309346498875258 NA Intergenic Intergenic -85843 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak1_21_119_-0.0470928529145676_6.88334416915123_0.309346498875258-2 chr17 6768075 6768575 + 0.309346498875258 NA intron (NM_009510, intron 1 of 12) intron (NM_009510, intron 1 of 12) 14455 NM_009510 22350 Mm.277812 NM_009510 ENSMUSG00000052397 Ezr AW146364|R75297|Vil2|p81 ezrin protein-coding unique_peak2_21_119_-0.0470928529145676_6.88334416915123_0.309346498875258 chr2 28513128 28514084 + 0.309346498875258 NA intron (NM_001145834, intron 1 of 17) CpG 439 NM_001145834 19730 Mm.5236 NM_009058 ENSMUSG00000026821 Ralgds Gnds|Rgds|mKIAA1308 ral guanine nucleotide dissociation stimulator protein-coding common_peak1_21_119_-0.0470928529145676_6.88334416915123_0.309346498875258-3 chr8 83771703 83772360 + 0.309346498875258 NA Intergenic Intergenic -30720 NM_001163031 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding unique_peak2_21_119_-0.0470928529145676_6.88334416915123_0.309346498875258-2 chr8 70426174 70427148 + 0.309346498875258 NA intron (NM_001004062, intron 1 of 13) intron (NM_001004062, intron 1 of 13) 12912 NM_001004062 382056 Mm.227767 NM_001004062 ENSMUSG00000003575 Crtc1 AI413414|Mect1|R74955|TORC1|mKIAA0616 CREB regulated transcription coactivator 1 protein-coding common_peak2_88_638_0.0133462478171928_9.32634524485559_0.309323267368205 chr4 42949139 42950525 + 0.309323267368205 NA Intergenic CpG -3262 NM_019874 56323 Mm.20437 NM_019874 ENSMUSG00000036052 Dnajb5 1110058L06Rik|AI462558|Hsc40|Hsp40-3 DnaJ heat shock protein family (Hsp40) member B5 protein-coding common_peak1_50_331_-0.0273686542194689_8.36135510423719_0.30929290803475 chr11 80089132 80090005 + 0.30929290803475 NA 5' UTR (NM_001029856, exon 1 of 23) 5' UTR (NM_001029856, exon 1 of 23) 168 NM_001029856 237877 Mm.89551 NM_001029856 ENSMUSG00000017550 Atad5 C130052G03Rik|FRAG1|Gm17 ATPase family, AAA domain containing 5 protein-coding common_peak2_88_652_-0.0179208127822434_9.34197877515531_0.309233747755539 chr6 47767305 47768863 + 0.309233747755539 NA Intergenic (TCC)n|Simple_repeat|Simple_repeat -15159 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_51_329_0.015711341581472_8.37417788503655_0.309218129123123-2 chr9 78587472 78588633 + 0.309218129123123 NA promoter-TSS (NM_001276452) promoter-TSS (NM_001276452) -7 NM_001276452 235504 Mm.46932 NM_172773 ENSMUSG00000049624 Slc17a5 4631416G20Rik|4732491M05|AST|ISSD|NSD|SD|SIALIN|SIASD|SLD solute carrier family 17 (anion/sugar transporter), member 5 protein-coding common_peak1_51_329_0.015711341581472_8.37417788503655_0.309218129123123 chr5 130023876 130024394 + 0.309218129123123 NA intron (NM_133768, intron 1 of 16) intron (NM_133768, intron 1 of 16) 196 NM_133768 109900 Mm.23869 NM_133768 ENSMUSG00000025533 Asl 2510006M18Rik argininosuccinate lyase protein-coding common_peak2_51_329_0.015711341581472_8.37417788503655_0.309218129123123 chr10 78351419 78352894 + 0.309218129123123 NA promoter-TSS (NM_053014) promoter-TSS (NM_053014) -456 NM_053014 28169 Mm.141230 NM_053014 ENSMUSG00000001211 Agpat3 AW061257|AW493985|D10Jhu12e|lpaat3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding unique_peak2_35_216_-0.0302535593854563_7.74642445275175_0.30914776770671-4 chrX 139997864 139998808 + 0.30914776770671 NA intron (NM_001172147, intron 1 of 7) intron (NM_001172147, intron 1 of 7) 259 NM_153586 237073 Mm.256670 NM_153586 ENSMUSG00000031433 Rbm41 BB131279|D330023I21Rik RNA binding motif protein 41 protein-coding unique_peak2_35_216_-0.0302535593854563_7.74642445275175_0.30914776770671-2 chr15 80148867 80150462 + 0.30914776770671 NA intron (NM_025609, intron 3 of 10) intron (NM_025609, intron 3 of 10) 16510 NM_025609 66513 Mm.288245 NM_025609 ENSMUSG00000022414 Tab1 2310012M03Rik|Map3k7ip1|b2b449Clo TGF-beta activated kinase 1/MAP3K7 binding protein 1 protein-coding common_peak1_35_216_-0.0302535593854563_7.74642445275175_0.30914776770671 chr13 44799596 44800316 + 0.30914776770671 NA intron (NM_001205044, intron 2 of 18) PB1D9|SINE|Alu 68685 NM_001205043 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding unique_peak2_35_216_-0.0302535593854563_7.74642445275175_0.30914776770671-3 chr2 131502100 131503408 + 0.30914776770671 NA intron (NM_145533, intron 1 of 6) intron (NM_145533, intron 1 of 6) 10892 NM_001177838 228608 Mm.136586 NM_145533 ENSMUSG00000027333 Smox B130066H01Rik|PAO|PAOh1|SMO spermine oxidase protein-coding unique_peak2_35_216_-0.0302535593854563_7.74642445275175_0.30914776770671 chr13 101758273 101760035 + 0.30914776770671 NA intron (NM_001077495, intron 1 of 15) intron (NM_001077495, intron 1 of 15) 9063 NM_001077495 18708 Mm.259333 NM_001024955 ENSMUSG00000041417 Pik3r1 PI3K|p50alpha|p55alpha|p85alpha phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) protein-coding common_peak1_35_216_-0.0302535593854563_7.74642445275175_0.30914776770671-2 chr2 26236851 26237589 + 0.30914776770671 NA exon (NM_153559, exon 1 of 13) exon (NM_153559, exon 1 of 13) 179 NM_153559 227638 Mm.116769 NM_153559 ENSMUSG00000036327 Qsox2 BC030934|Qscn6l1|Soxn quiescin Q6 sulfhydryl oxidase 2 protein-coding common_peak1_112_856_0.0123681040599006_9.74933544614245_0.30910992213399 chr6 39419556 39420735 + 0.30910992213399 NA promoter-TSS (NM_001311109) promoter-TSS (NM_001311109) 224 NM_018810 54484 Mm.270484 NM_018810 ENSMUSG00000029922 Mkrn1 RFP makorin, ring finger protein, 1 protein-coding common_peak1_90_656_0.0125954823977175_9.36604730152119_0.309096913597138 chr18 46596659 46597589 + 0.309096913597138 NA promoter-TSS (NM_010120) promoter-TSS (NM_010120) 411 NM_025698 66676 Mm.296043 NM_025698 ENSMUSG00000033184 Tmed7 3930401E15Rik|5830493P14Rik|AU044611|AW545765|TRAM transmembrane p24 trafficking protein 7 protein-coding common_peak1_51_339_-0.0273573803104146_8.39571224598249_0.309096460694402 chr7 64287421 64288213 + 0.309096460694402 NA exon (NM_172742, exon 1 of 16) exon (NM_172742, exon 1 of 16) 147 NM_172742 233315 Mm.214959 NM_172742 ENSMUSG00000030522 Mtmr10 BB128963|C79734 myotubularin related protein 10 protein-coding common_peak1_189_1624_0.00885809865838816_10.6706530521324_0.309092243606764 chr17 33759237 33760435 + 0.309092243606764 NA intron (NM_008997, intron 1 of 4) intron (NM_008997, intron 1 of 4) 650 NM_008997 19326 Mm.387587 NM_008997 ENSMUSG00000077450 Rab11b A730055L17Rik RAB11B, member RAS oncogene family protein-coding common_peak1_11_53_0.0322756547422713_5.7710253295346_0.309072945808617 chr7 120684898 120685282 + 0.309072945808617 NA intron (NM_001164580, intron 1 of 2) intron (NM_001164580, intron 1 of 2) 7470 NM_001164580 233812 Mm.276479 NM_001164580 ENSMUSG00000046096 BC030336 - cDNA sequence BC030336 protein-coding unique_peak2_22_120_0.0195975668189154_6.92866202068405_0.309072690382408 chr10 20907283 20908222 + 0.309072690382408 NA Intergenic Intergenic -44795 NM_026203 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak1_22_120_0.0195975668189154_6.92866202068405_0.309072690382408-3 chr2 30285914 30286404 + 0.309072690382408 NA promoter-TSS (NM_198304) promoter-TSS (NM_198304) 195 NM_177648 227697 Mm.26690 NM_177648 ENSMUSG00000075419 Dolk BC026973|Tmem15|mKIAA1094 dolichol kinase protein-coding common_peak2_22_120_0.0195975668189154_6.92866202068405_0.309072690382408-2 chr7 132610267 132610947 + 0.309072690382408 NA promoter-TSS (NM_029609) promoter-TSS (NM_029609) -36 NM_029609 76429 Mm.276721 NM_029609 ENSMUSG00000030946 Lhpp 2310007H09Rik phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding common_peak1_22_120_0.0195975668189154_6.92866202068405_0.309072690382408-4 chr6 129740893 129741314 + 0.309072690382408 NA promoter-TSS (NM_177155) promoter-TSS (NM_177155) -619 NM_177155 320407 Mm.123265 NM_177155 ENSMUSG00000043932 Klri2 A530090P03Rik killer cell lectin-like receptor family I member 2 protein-coding unique_peak2_22_120_0.0195975668189154_6.92866202068405_0.309072690382408-2 chr19 53824736 53825635 + 0.309072690382408 NA intron (NM_001170847, intron 5 of 13) intron (NM_001170847, intron 5 of 13) -67046 NM_011050 18569 Mm.1605 NM_011050 ENSMUSG00000024975 Pdcd4 D19Ucla1|Ma3|Tis programmed cell death 4 protein-coding common_peak1_22_120_0.0195975668189154_6.92866202068405_0.309072690382408-2 chr18 57970404 57970950 + 0.309072690382408 NA Intergenic Intergenic 91999 NM_009194 20496 Mm.399997 NM_009194 ENSMUSG00000024597 Slc12a2 9330166H04Rik|Nkcc1|mBSC2|sy-ns solute carrier family 12, member 2 protein-coding common_peak2_22_120_0.0195975668189154_6.92866202068405_0.309072690382408 chr15 85879298 85879920 + 0.309072690382408 NA intron (NM_028063, intron 1 of 10) intron (NM_028063, intron 1 of 10) 282 NM_028063 72026 Mm.158211 NM_028063 ENSMUSG00000022386 Trmu 1110005N20Rik|1600025P05Rik|AI314320|Trmt1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding common_peak1_22_120_0.0195975668189154_6.92866202068405_0.309072690382408 chr11 70982594 70983060 + 0.309072690382408 NA exon (NM_007573, exon 1 of 6) exon (NM_007573, exon 1 of 6) 199 NM_007573 12261 Mm.30049 NM_007573 ENSMUSG00000018446 C1qbp AA407365|AA986492|D11Wsu182e|HABP1|P32|gC1qBP complement component 1, q subcomponent binding protein protein-coding common_peak1_314_3055_-0.00771408120564665_11.5735717874329_0.309046103708877 chr1 86524872 86526595 + 0.309046103708877 NA Intergenic CpG -1003 NM_008972 19231 Mm.19187 NM_008972 ENSMUSG00000026238 Ptma Thym prothymosin alpha protein-coding common_peak1_162_1365_-0.0118973243687197_10.4097931061057_0.309013368095245 chr3 58524884 58526070 + 0.309013368095245 NA promoter-TSS (NM_001005509) promoter-TSS (NM_001005509) -344 NM_001005509 229317 Mm.21617 NM_001005509 ENSMUSG00000027810 Eif2a D030048D22|D3Ertd194e eukaryotic translation initiation factor 2A protein-coding common_peak1_36_216_0.0182324187669307_7.77066744182794_0.308998813542723 chr2 130563728 130564465 + 0.308998813542723 NA promoter-TSS (NR_040348) promoter-TSS (NR_040348) 339 NM_207207 99045 Mm.30057 NM_207207 ENSMUSG00000037740 Mrps26 AI648866|GI008|MRP-S13|MRP-S26|Rpms13 mitochondrial ribosomal protein S26 protein-coding common_peak2_36_216_0.0182324187669307_7.77066744182794_0.308998813542723 chr13 98832184 98833428 + 0.308998813542723 NA Intergenic B1_Mur2|SINE|Alu -17357 NM_172591 218503 Mm.23928 NM_172591 ENSMUSG00000041685 Fcho2 5832424M12Rik|AA387320 FCH domain only 2 protein-coding common_peak2_91_665_0.0123070593949617_9.38553189676874_0.308988307868664 chr13 67359751 67361140 + 0.308988307868664 NA intron (NM_001038651, intron 1 of 3) intron (NM_001038651, intron 1 of 3) 127 NM_001038651 629016 Mm.440800 NM_001038651 ENSMUSG00000098905 Zfp953 E130120F12Rik zinc finger protein 953 protein-coding common_peak1_221_1967_0.00801597321181191_10.9465224919451_0.308954286312549 chr8 70509414 70511499 + 0.308954286312549 NA promoter-TSS (NM_019883) promoter-TSS (NM_019883) -89 NM_019883 22186 Mm.297372 NM_019883 ENSMUSG00000090137 Uba52 D8Ertd21e|Gm1863|Rps27a|Ubb|Ubc ubiquitin A-52 residue ribosomal protein fusion product 1 protein-coding common_peak2_684_7907_-0.00465401231602769_12.9467701495712_0.308951266024259 chr11 46303090 46313043 + 0.308951266024259 NA intron (NM_001252459, intron 1 of 30) MTEb|LTR|ERVL-MaLR 4292 NM_001252460 76884 Mm.154358 NM_133769 ENSMUSG00000020340 Cyfip2 1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168 cytoplasmic FMR1 interacting protein 2 protein-coding common_peak1_71_491_0.0153954789061395_8.95021224479231_0.308942291944297 chr6 87498944 87500388 + 0.308942291944297 NA intron (NM_001037727, intron 1 of 10) MER3|DNA|hAT-Charlie -3339 NM_175476 232201 Mm.119564 NM_175476 ENSMUSG00000030047 Arhgap25 A130039I20Rik Rho GTPase activating protein 25 protein-coding common_peak2_164_1385_-0.011286007598013_10.4310685383382_0.308897666534342 chr14 20171839 20176986 + 0.308897666534342 NA intron (NM_021542, intron 1 of 4) B1_Mur4|SINE|Alu 7370 NM_021542 16529 Mm.68998 NM_021542 ENSMUSG00000023243 Kcnk5 KCNK5b|TASK-2 potassium channel, subfamily K, member 5 protein-coding common_peak1_92_674_0.0120730289493967_9.40478020641289_0.308882587645112 chr10 88583900 88585174 + 0.308882587645112 NA intron (NM_175418, intron 2 of 28) intron (NM_175418, intron 2 of 28) 20615 NM_001252372 109272 Mm.147208 NM_175418 ENSMUSG00000020061 Mybpc1 8030451F13Rik myosin binding protein C, slow-type protein-coding common_peak1_22_126_-0.0502238826786554_6.96357274543284_0.308878881015853 chr10 117853152 117853575 + 0.308878881015853 NA Intergenic B4A|SINE|B4 -7389 NM_024457 215449 Mm.233009 NM_024457 ENSMUSG00000052681 Rap1b 2810443E11Rik RAS related protein 1b protein-coding common_peak1_22_126_-0.0502238826786554_6.96357274543284_0.308878881015853-2 chr17 33910232 33910737 + 0.308878881015853 NA exon (NM_007829, exon 2 of 8) exon (NM_007829, exon 2 of 8) 883 NM_001199733 13163 Mm.271809 NM_007829 ENSMUSG00000002307 Daxx - Fas death domain-associated protein protein-coding common_peak1_22_126_-0.0502238826786554_6.96357274543284_0.308878881015853-3 chr18 5591158 5591728 + 0.308878881015853 NA promoter-TSS (NM_011546) promoter-TSS (NM_011546) -417 NM_011546 21417 Mm.3929 NM_011546 ENSMUSG00000024238 Zeb1 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1 zinc finger E-box binding homeobox 1 protein-coding common_peak2_36_224_-0.0339975400056272_7.79678242121422_0.30885522731831 chr7 46838414 46839764 + 0.30885522731831 NA Intergenic Intergenic -6715 NM_010699 16828 Mm.29324 NM_010699 ENSMUSG00000063229 Ldha Ldh1|Ldhm|l7R2 lactate dehydrogenase A protein-coding common_peak1_11_57_-0.0708178382218323_5.82257207601666_0.308785666485011 chr17 15714870 15715253 + 0.308785666485011 NA intron (NM_007690, intron 2 of 35) intron (NM_007690, intron 2 of 35) 10094 NM_007690 12648 Mm.8137 NM_007690 ENSMUSG00000023852 Chd1 4930525N21Rik|AI851787|AW555109 chromodomain helicase DNA binding protein 1 protein-coding common_peak1_37_223_0.0196215925256427_7.81716571832042_0.308750888129544 chr14 61556171 61556812 + 0.308750888129544 NA intron (NM_001310603, intron 1 of 3) CpG 395 NM_025697 66674 Mm.282706 NM_025697 ENSMUSG00000021930 Spryd7 6330409N04Rik|Clld6 SPRY domain containing 7 protein-coding common_peak1_37_223_0.0196215925256427_7.81716571832042_0.308750888129544-2 chr16 37011142 37011850 + 0.308750888129544 NA promoter-TSS (NM_029977) promoter-TSS (NM_029977) -290 NM_029977 77782 Mm.259114 NM_029977 ENSMUSG00000034206 Polq A430110D14Rik polymerase (DNA directed), theta protein-coding common_peak2_37_223_0.0196215925256427_7.81716571832042_0.308750888129544 chr15 84855605 84856721 + 0.308750888129544 NA promoter-TSS (NR_030731) promoter-TSS (NR_030731) -34 NR_030731 271305 Mm.101022 NM_001081166 ENSMUSG00000016624 Phf21b A730032D07Rik PHD finger protein 21B protein-coding common_peak1_72_512_-0.0204959892214251_8.99256702099634_0.308709117407111 chr19 4215874 4217451 + 0.308709117407111 NA intron (NM_001310038, intron 2 of 3) intron (NM_001310038, intron 2 of 3) 2273 NM_001310039 56708 Mm.347919 NM_019952 ENSMUSG00000040663 Clcf1 BSF-3|Bsf3|CLC|NNT-1 cardiotrophin-like cytokine factor 1 protein-coding common_peak1_116_910_-0.0142292780409061_9.8241926047816_0.308699680305349 chr3 137980223 137981633 + 0.308699680305349 NA intron (NM_011932, intron 1 of 8) intron (NM_011932, intron 1 of 8) 621 NM_011932 26377 Mm.254835 NM_011932 ENSMUSG00000028159 Dapp1 Bam32 dual adaptor for phosphotyrosine and 3-phosphoinositides 1 protein-coding common_peak1_23_126_0.0250907813199293_7.00123007743213_0.308694192736745-4 chrX 12587190 12587568 + 0.308694192736745 NA promoter-TSS (NM_027439) promoter-TSS (NM_027439) -380 NM_027439 70495 Mm.25148 NM_027439 ENSMUSG00000031007 Atp6ap2 (P)RR|5730403E06Rik|APT6M8-9|ATP6M8-9|Atp6ip2|M8-9|PRR ATPase, H+ transporting, lysosomal accessory protein 2 protein-coding common_peak1_23_126_0.0250907813199293_7.00123007743213_0.308694192736745-2 chr3 153719959 153720529 + 0.308694192736745 NA intron (NM_011372, intron 1 of 4) intron (NM_011372, intron 1 of 4) 4889 NM_011372 20447 Mm.296453 NM_011372 ENSMUSG00000052544 St6galnac3 Siat7c ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding common_peak1_23_126_0.0250907813199293_7.00123007743213_0.308694192736745 chr17 32404173 32404672 + 0.308694192736745 NA promoter-TSS (NM_178785) promoter-TSS (NM_178785) -841 NM_178785 320484 Mm.122284 NM_178785 ENSMUSG00000052142 Rasal3 A430107D22Rik RAS protein activator like 3 protein-coding common_peak1_23_126_0.0250907813199293_7.00123007743213_0.308694192736745-3 chr9 56549982 56550488 + 0.308694192736745 NA Intergenic Intergenic 85413 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding common_peak1_37_231_-0.0310044805443255_7.84247875485541_0.308616021919387 chr2 48467766 48468655 + 0.308616021919387 NA Intergenic (TC)n|Simple_repeat|Simple_repeat -345899 NM_007396 11480 Mm.314338 NM_007396 ENSMUSG00000052155 Acvr2a ActrIIa|Acvr2|TactrII activin receptor IIA protein-coding common_peak2_37_231_-0.0310044805443255_7.84247875485541_0.308616021919387 chr12 80432679 80434041 + 0.308616021919387 NA intron (NM_177267, intron 1 of 8) intron (NM_177267, intron 1 of 8) 3241 NM_177267 320808 Mm.220310 NM_177267 ENSMUSG00000049106 Dcaf5 9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22 DDB1 and CUL4 associated factor 5 protein-coding common_peak1_73_520_-0.0187435998807413_9.01576776233814_0.308590290194778-2 chr2 180582473 180583400 + 0.308590290194778 NA exon (NM_028479, exon 2 of 6) exon (NM_028479, exon 2 of 6) 1632 NM_028479 73247 Mm.426558 NM_028479 ENSMUSG00000027569 Mrgbp 1600027N09Rik|AW060503|C80444 MRG/MORF4L binding protein protein-coding common_peak1_73_520_-0.0187435998807413_9.01576776233814_0.308590290194778 chr13 13953792 13955239 + 0.308590290194778 NA promoter-TSS (NM_178640) promoter-TSS (NM_178640) -159 NM_178640 97884 Mm.21686 NM_178640 ENSMUSG00000039242 B3galnt2 A930105D20Rik|C80633|D230016N13Rik UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 protein-coding common_peak2_54_362_-0.0225347196098351_8.49255837819083_0.308580377832695 chr8 61450456 61451744 + 0.308580377832695 NA Intergenic Intergenic -36634 NM_145595 234309 Mm.29059 NM_145595 ENSMUSG00000031641 Cbr4 A730083J17Rik|BC009118 carbonyl reductase 4 protein-coding common_peak1_54_362_-0.0225347196098351_8.49255837819083_0.308580377832695 chr9 58253045 58253744 + 0.308580377832695 NA non-coding (NR_028146, exon 1 of 8) non-coding (NR_028146, exon 1 of 8) 230 NM_026942 69106 Mm.216502 NM_026942 ENSMUSG00000032333 Stoml1 1810015E19Rik|AI847431|SLP1|STORP|UNC24|WPB72 stomatin-like 1 protein-coding unique_peak2_23_132_-0.0415069674090951_7.03452895179664_0.30851799644699 chr5 128982820 128983932 + 0.30851799644699 NA Intergenic Intergenic 25196 NM_001286033 13852 Mm.260716 NM_007941 ENSMUSG00000029428 Stx2 AW538950|Epim|G1-536-1|Syn-2|repro34 syntaxin 2 protein-coding common_peak1_23_132_-0.0415069674090951_7.03452895179664_0.30851799644699 chr9 32494832 32495501 + 0.30851799644699 NA intron (NM_008026, intron 1 of 8) intron (NM_008026, intron 1 of 8) 46286 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak1_38_230_0.0211944081918034_7.86234624551196_0.308517924306494-2 chr2 6478446 6479253 + 0.308517924306494 NA Intergenic Intergenic 126113 NM_181399 98910 Mm.40673 NM_181399 ENSMUSG00000039046 Usp6nl AI316785|RNTRE|TRE2NL|mKIAA0019 USP6 N-terminal like protein-coding common_peak1_38_230_0.0211944081918034_7.86234624551196_0.308517924306494 chr15 73147901 73148611 + 0.308517924306494 NA intron (NM_153178, intron 1 of 18) intron (NM_153178, intron 1 of 18) 36691 NM_153178 239528 Mm.23095 NM_153178 ENSMUSG00000036698 Ago2 1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215 argonaute RISC catalytic subunit 2 protein-coding common_peak1_55_360_0.017322034317111_8.50451604404573_0.308517890916534 chr5 64378251 64379246 + 0.308517890916534 NA Intergenic Intergenic 89194 NR_040681 69999 Mm.261413 NR_040681 ENSMUSG00000100911 1700027F09Rik - RIKEN cDNA 1700027F09 gene ncRNA common_peak1_96_710_0.011632613743993_9.47952205649141_0.308486377920231 chr5 138084605 138085641 + 0.308486377920231 NA promoter-TSS (NM_029869) promoter-TSS (NM_029869) 39 NM_133906 74570 Mm.213114 NM_029869 ENSMUSG00000029729 Zkscan1 5930429A01Rik|9130423L19Rik|9230118B16Rik|AI646829|AI788588|C87323|KOX18|PHZ-37|ZNF139 zinc finger with KRAB and SCAN domains 1 protein-coding common_peak2_96_710_0.011632613743993_9.47952205649141_0.308486377920231 chr10 88583624 88585350 + 0.308486377920231 NA intron (NM_175418, intron 2 of 28) intron (NM_175418, intron 2 of 28) 20665 NM_001252372 109272 Mm.147208 NM_175418 ENSMUSG00000020061 Mybpc1 8030451F13Rik myosin binding protein C, slow-type protein-coding common_peak2_74_529_-0.0196988411608956_9.03999912887011_0.308460930127942 chr6 40887478 40889844 + 0.308460930127942 NA intron (NR_035473, intron 2 of 3) intron (NR_035473, intron 2 of 3) -1167 NM_139296 194357 Mm.207087 NM_139296 ENSMUSG00000029885 Moxd2 Dbhl1 monooxygenase, DBH-like 2 protein-coding common_peak2_75_525_0.0146698364773012_9.04625390753095_0.308432782345588 chr11 75651354 75652384 + 0.308432782345588 NA promoter-TSS (NM_001080774) promoter-TSS (NM_001080774) -281 NM_001080774 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding common_peak1_38_238_-0.0279233583728882_7.8869051287943_0.308391007197135 chr10 80758041 80758760 + 0.308391007197135 NA intron (NM_199322, intron 1 of 27) PB1D10|SINE|Alu 3194 NM_199322 208266 Mm.152371 NM_199322 ENSMUSG00000061589 Dot1l A630076O07|AW907654|Dot1|KMT4|mDot1 DOT1-like, histone H3 methyltransferase (S. cerevisiae) protein-coding common_peak2_38_238_-0.0279233583728882_7.8869051287943_0.308391007197135 chr4 7595568 7596812 + 0.308391007197135 NA Intergenic Intergenic 35502 NR_040645 71510 Mm.410775 NR_040645 ENSMUSG00000086070 8430436N08Rik - RIKEN cDNA 8430436N08 gene ncRNA common_peak1_38_238_-0.0279233583728882_7.8869051287943_0.308391007197135-2 chr5 54100636 54101352 + 0.308391007197135 NA intron (NM_001081103, intron 3 of 11) intron (NM_001081103, intron 3 of 11) 102471 NM_001081103 116873 Mm.265985 NM_054083 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 protein-coding common_peak2_377_3818_-0.00662321733109295_11.895667595957_0.308325236415678 chr8 70672400 70676436 + 0.308325236415678 NA intron (NM_015816, intron 1 of 4) intron (NM_015816, intron 1 of 4) 1187 NM_015816 50783 Mm.248188 NM_015816 ENSMUSG00000031848 Lsm4 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak1_76_534_0.0133264594845564_9.07005831103079_0.308308711993589 chr2 25054143 25055229 + 0.308308711993589 NA TTS (NM_146251) TTS (NM_146251) 307 NM_001177655 56876 Mm.42956 NM_020276 ENSMUSG00000006476 Nsmf Jacob|Nelf NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding common_peak1_237_2143_0.00759549096822631_11.0698869359419_0.308305296577043 chr13 52981195 52983323 + 0.308305296577043 NA Intergenic Intergenic -1220 NM_017373 18030 Mm.136604 NM_017373 ENSMUSG00000056749 Nfil3 AV225605|E4BP4 nuclear factor, interleukin 3, regulated protein-coding common_peak2_24_133_0.0199260016786118_7.07605219129708_0.308295295599209 chr8 3278956 3279758 + 0.308295295599209 NA 5' UTR (NM_010568, exon 1 of 21) 5' UTR (NM_010568, exon 1 of 21) 260 NM_010568 16337 Mm.268003 NM_010568 ENSMUSG00000005534 Insr 4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B insulin receptor protein-coding unique_peak2_24_133_0.0199260016786118_7.07605219129708_0.308295295599209 chr2 78993604 78994870 + 0.308295295599209 NA Intergenic Intergenic 125190 NM_009454 22193 Mm.1485 NM_009454 ENSMUSG00000027011 Ube2e3 Ubce4|ubcM2 ubiquitin-conjugating enzyme E2E 3 protein-coding common_peak1_24_133_0.0199260016786118_7.07605219129708_0.308295295599209 chr11 58183106 58183640 + 0.308295295599209 NA promoter-TSS (NM_001135115) promoter-TSS (NM_001135115) -470 NM_001135115 631323 Mm.394103 NM_001135115 Gm12250 Irgb10|OTTMUSG00000005723 predicted gene 12250 protein-coding common_peak2_205_1816_-0.00918250927101916_10.8227514495986_0.30828623884753 chr17 57278154 57281027 + 0.30828623884753 NA intron (NM_001163815, intron 2 of 27) intron (NM_001163815, intron 2 of 27) 490 NM_001163815 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding common_peak2_56_378_-0.0215553186209192_8.55527637886063_0.308258652295194 chr18 79299215 79301422 + 0.308258652295194 NA Intergenic Intergenic -190927 NM_053099 240427 Mm.312871 NM_053099 ENSMUSG00000024548 Setbp1 C130092E12|Seb|mKIAA0437 SET binding protein 1 protein-coding common_peak1_56_378_-0.0215553186209192_8.55527637886063_0.308258652295194 chr5 53267058 53267838 + 0.308258652295194 NA intron (NM_001145433, intron 1 of 2) intron (NM_001145433, intron 1 of 2) 342 NM_001145433 66278 Mm.27900 NM_001145433 ENSMUSG00000061461 Smim20 1110067B18Rik|1810013D10Rik|N28078 small integral membrane protein 20 protein-coding common_peak2_177_1519_-0.0102249283804028_10.5647431441407_0.308201317847058 chr8 109564681 109566809 + 0.308201317847058 NA promoter-TSS (NM_178380) promoter-TSS (NM_178380) -144 NM_178380 64340 Mm.23705 NM_178380 ENSMUSG00000037993 Dhx38 5730550P09Rik|AI325984|AW540902|Ddx38|Prp16|mKIAA0224 DEAH (Asp-Glu-Ala-His) box polypeptide 38 protein-coding common_peak1_77_543_0.0120929195438784_9.09350930102228_0.308188731935195 chr10 78412205 78413069 + 0.308188731935195 NA intron (NM_010925, intron 1 of 12) CpG 406 NM_010925 18114 Mm.38344 NM_010925 ENSMUSG00000061032 Rrp1 AL033305|AL033306|AU018604|NNP-1|Nnp1 ribosomal RNA processing 1 homolog (S. cerevisiae) protein-coding common_peak2_239_2190_-0.00888040283344971_11.0929335675735_0.308188704920645 chr6 87849217 87851818 + 0.308188704920645 NA intron (NM_001109745, intron 1 of 4) CpG 589 NM_001109746 12785 Mm.290251 NM_013493 ENSMUSG00000030057 Cnbp AA408710|Cnbp1|Znf9 cellular nucleic acid binding protein protein-coding common_peak1_24_139_-0.0432678248085825_7.10764910454068_0.308136773605315-3 chr9 4376509 4377105 + 0.308136773605315 NA Intergenic Intergenic -6730 NM_145609 78100 Mm.206549 NM_145609 ENSMUSG00000041124 Msantd4 8430410K20Rik|Mysantd4 Myb/SANT-like DNA-binding domain containing 4 with coiled-coils protein-coding common_peak1_24_139_-0.0432678248085825_7.10764910454068_0.308136773605315 chr2 166332819 166333272 + 0.308136773605315 NA Intergenic Intergenic 59137 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 OTTMUSG00000001131 predicted gene 11468 ncRNA unique_peak2_24_139_-0.0432678248085825_7.10764910454068_0.308136773605315 chr15 78802346 78803497 + 0.308136773605315 NA exon (NM_130859, exon 1 of 21) exon (NM_130859, exon 1 of 21) 121 NM_130859 105844 Mm.17629 NM_130859 ENSMUSG00000033170 Card10 AI449026|Bimp1|Carma3 caspase recruitment domain family, member 10 protein-coding unique_peak2_24_139_-0.0432678248085825_7.10764910454068_0.308136773605315-2 chr4 62756383 62757590 + 0.308136773605315 NA Intergenic Intergenic 83012 NM_001310706 50780 Mm.286753 NM_019492 ENSMUSG00000059810 Rgs3 4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S regulator of G-protein signaling 3 protein-coding common_peak1_24_139_-0.0432678248085825_7.10764910454068_0.308136773605315-2 chr5 115507699 115508244 + 0.308136773605315 NA intron (NM_011223, intron 1 of 10) intron (NM_011223, intron 1 of 10) 1295 NM_133915 19303 Mm.18714 NM_011223 ENSMUSG00000029528 Pxn AW108311|AW123232|Pax paxillin protein-coding common_peak2_150_1242_-0.0110901960669327_10.274065483019_0.308136648302733 chr10 42837908 42840295 + 0.308136648302733 NA Intergenic L1MB3|LINE|L1 -21411 NM_172938 268297 Mm.98731 NM_172938 ENSMUSG00000044770 Scml4 9330161D17|mFLJ00197 sex comb on midleg-like 4 (Drosophila) protein-coding common_peak1_349_3474_-0.00663364991002169_11.7594804375432_0.308077185530394 chr8 70673244 70676158 + 0.308077185530394 NA intron (NM_015816, intron 1 of 4) intron (NM_015816, intron 1 of 4) 1470 NM_015816 50783 Mm.248188 NM_015816 ENSMUSG00000031848 Lsm4 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding common_peak2_40_245_0.0189287597261858_7.95197888520233_0.308063181537893 chr7 105399307 105400610 + 0.308063181537893 NA promoter-TSS (NM_001242365) promoter-TSS (NM_001242365) 96 NM_001242364 74349 Mm.30254 NM_199009 ENSMUSG00000044465 Fam160a2 4632419K20Rik|6530415H11Rik|FHIP family with sequence similarity 160, member A2 protein-coding common_peak1_101_755_0.0120406640927406_9.56826275626744_0.308044005266324 chr7 12921244 12922291 + 0.308044005266324 NA promoter-TSS (NM_009095) promoter-TSS (NM_009095) -544 NM_009095 20103 Mm.5291 NM_009095 ENSMUSG00000012848 Rps5 AA617411 ribosomal protein S5 protein-coding common_peak1_12_63_-0.0711910665454232_5.96440446672729_0.308035049112909 chr11 116139038 116139439 + 0.308035049112909 NA promoter-TSS (NM_024177) promoter-TSS (NM_024177) -370 NM_024177 60441 Mm.29974 NM_024177 ENSMUSG00000020775 Mrpl38 1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3 mitochondrial ribosomal protein L38 protein-coding common_peak2_58_385_0.0130693677737455_8.59899172115495_0.308034793966371 chr3 106002481 106004357 + 0.308034793966371 NA intron (NM_001200028, intron 1 of 5) L1_Mus3|LINE|L1 -1922 NM_029604 100503311 Mm.386825 NM_029604 ENSMUSG00000010136 Pifo 1700027A23Rik primary cilia formation protein-coding common_peak1_58_385_0.0130693677737455_8.59899172115495_0.308034793966371 chr16 49799844 49800697 + 0.308034793966371 NA Intergenic Intergenic -55384 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_152_1263_-0.011975454896362_10.2977930207289_0.308018062409976 chr6 47787850 47789588 + 0.308018062409976 NA Intergenic Intergenic 14933 NR_030485 735289 NR_030485 ENSMUSG00000076060 Mir704 Mirn704|mir-704|mmu-mir-704 microRNA 704 ncRNA common_peak2_78_563_-0.0174522612854773_9.13082522175606_0.308009761794641 chr10 85916106 85917266 + 0.308009761794641 NA promoter-TSS (NM_181650) promoter-TSS (NM_181650) 43 NM_181650 72843 Mm.25307 NM_181650 ENSMUSG00000035529 Prdm4 1700031E19Rik|2810470D21Rik|AW552272|SC-1|SC1 PR domain containing 4 protein-coding common_peak1_40_253_-0.0272414217067398_7.9750639759188_0.307951096503207 chr12 25365712 25366309 + 0.307951096503207 NA Intergenic Lx8|LINE|L1 236836 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_40_253_-0.0272414217067398_7.9750639759188_0.307951096503207 chr7 4876879 4877926 + 0.307951096503207 NA intron (NM_001101598, intron 1 of 5) intron (NM_001101598, intron 1 of 5) 349 NM_001101598 664994 Mm.302624 NM_001101598 ENSMUSG00000086784 Isoc2a Isoc2 isochorismatase domain containing 2a protein-coding common_peak1_25_140_0.0158698922421383_7.14748629851986_0.307935867653631-3 chr4 150926541 150927005 + 0.307935867653631 NA intron (NM_011612, intron 1 of 7) intron (NM_011612, intron 1 of 7) -1226 NM_001077509 21942 Mm.244187 NM_011612 ENSMUSG00000028965 Tnfrsf9 4-1BB|A930040I11Rik|AA408498|AI325004|CDw137|Cd137|ILA|Ly63 tumor necrosis factor receptor superfamily, member 9 protein-coding common_peak1_25_140_0.0158698922421383_7.14748629851986_0.307935867653631 chr2 32736470 32737052 + 0.307935867653631 NA intron (NM_027529, intron 2 of 2) intron (NM_027529, intron 2 of 2) 4255 NM_027529 70730 Mm.401360 NM_027529 ENSMUSG00000009551 6330409D20Rik AA517851 RIKEN cDNA 6330409D20 gene protein-coding unique_peak2_25_140_0.0158698922421383_7.14748629851986_0.307935867653631 chr18 57598519 57599701 + 0.307935867653631 NA intron (NM_001311063, intron 5 of 5) intron (NM_001311063, intron 5 of 5) 39475 NR_045360 70157 Mm.490532 NR_045360 2210409D07Rik - RIKEN cDNA 2210409D07 gene ncRNA unique_peak2_25_140_0.0158698922421383_7.14748629851986_0.307935867653631-2 chrX 9219309 9220486 + 0.307935867653631 NA intron (NM_173414, intron 1 of 4) intron (NM_173414, intron 1 of 4) 19924 NM_173414 236285 Mm.245119 NM_173414 ENSMUSG00000047344 Lancl3 6030463G20Rik LanC lantibiotic synthetase component C-like 3 (bacterial) protein-coding common_peak1_25_140_0.0158698922421383_7.14748629851986_0.307935867653631-2 chr4 11321591 11322217 + 0.307935867653631 NA intron (NM_001081201, intron 1 of 18) CpG 227 NM_001081201 381510 Mm.331486 NM_001081201 ENSMUSG00000045205 Dpy19l4 Gm1023|Narg3 dpy-19-like 4 (C. elegans) protein-coding common_peak1_25_140_0.0158698922421383_7.14748629851986_0.307935867653631-4 chr8 106888444 106888947 + 0.307935867653631 NA intron (NM_145412, intron 1 of 3) intron (NM_145412, intron 1 of 3) 4898 NM_145412 214987 Mm.490308 NM_145412 ENSMUSG00000046691 Chtf8 5830457O10Rik|Ctf8|Derpc CTF8, chromosome transmission fidelity factor 8 protein-coding common_peak2_59_393_0.0132169243276845_8.62866028162022_0.307893102081078 chr4 16013271 16014659 + 0.307893102081078 NA promoter-TSS (NM_145950) promoter-TSS (NM_145950) -88 NM_145950 209212 Mm.46455 NM_145950 ENSMUSG00000041153 Osgin2 BC010311|C230027H09Rik oxidative stress induced growth inhibitor family member 2 protein-coding common_peak1_216_1913_0.00784319951375068_10.9062967142429_0.307877754888285 chr13 91369999 91372274 + 0.307877754888285 NA non-coding (NR_045161, exon 3 of 3) non-coding (NR_045161, exon 3 of 3) 16949 NR_045161 320297 Mm.375866 NR_045161 ENSMUSG00000097182 A830009L08Rik - RIKEN cDNA A830009L08 gene ncRNA common_peak2_41_253_0.0154022682126893_7.99638582087851_0.307842527971544 chr18 80085975 80087639 + 0.307842527971544 NA intron (NM_053117, intron 2 of 2) intron (NM_053117, intron 2 of 2) 39912 NM_053117 93737 Mm.24678 NM_053117 ENSMUSG00000056214 Pard6g 2410049N21Rik|Par6a par-6 family cell polarity regulator gamma protein-coding common_peak2_218_1935_0.00759030526431914_10.9226583899068_0.307800119689433 chr1 64735879 64739398 + 0.307800119689433 NA 5' UTR (NM_022721, exon 1 of 2) 5' UTR (NM_022721, exon 1 of 2) 112 NM_001042659 14367 Mm.150813 NM_022721 ENSMUSG00000045005 Fzd5 5330434N09Rik|AI427138|Fz-5|Fz5|mFz5 frizzled class receptor 5 protein-coding common_peak1_25_146_-0.0442511001954324_7.17754679473865_0.307792487943787 chr10 61559282 61559890 + 0.307792487943787 NA intron (NM_153542, intron 4 of 4) intron (NM_153542, intron 4 of 4) -35898 NM_001177511 237362 Mm.131297 NM_001177511 ENSMUSG00000020090 Npffr1 Gm236|Gpr147|NPFF1|NPFF1R|OT7T022 neuropeptide FF receptor 1 protein-coding common_peak1_25_146_-0.0442511001954324_7.17754679473865_0.307792487943787-2 chr4 55532677 55533179 + 0.307792487943787 NA promoter-TSS (NM_010637) promoter-TSS (NM_010637) -453 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) protein-coding common_peak1_25_146_-0.0442511001954324_7.17754679473865_0.307792487943787-4 chr9 46151853 46152462 + 0.307792487943787 NA intron (NM_027498, intron 3 of 24) intron (NM_027498, intron 3 of 24) -76473 NM_009692 11806 Mm.26743 NM_009692 ENSMUSG00000032083 Apoa1 Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I apolipoprotein A-I protein-coding common_peak2_25_146_-0.0442511001954324_7.17754679473865_0.307792487943787 chr13 63885448 63886467 + 0.307792487943787 NA intron (NM_001013608, intron 17 of 18) intron (NM_001013608, intron 17 of 18) 70623 NM_023507 76251 Mm.186610 NM_023507 ENSMUSG00000021470 Ercc6l2 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278 excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 protein-coding common_peak1_25_146_-0.0442511001954324_7.17754679473865_0.307792487943787-3 chr9 32904995 32905519 + 0.307792487943787 NA non-coding (NR_131058, exon 4 of 4) non-coding (NR_131058, exon 4 of 4) 23709 NR_131058 330917 Mm.488283 NR_131058 Gm27162 A430016B06 predicted gene 27162 ncRNA common_peak1_129_1035_-0.0132814561673023_10.0101675596029_0.307769791146865 chr8 122376139 122377436 + 0.307769791146865 NA 5' UTR (NM_001029994, exon 1 of 18) 5' UTR (NM_001029994, exon 1 of 18) 171 NM_001029993 76014 Mm.241489 NM_001029993 ENSMUSG00000017478 Zc3h18 1190001B23Rik|5830416A07Rik|Nhn1 zinc finger CCCH-type containing 18 protein-coding common_peak1_60_401_0.0134677598680444_8.65778557111295_0.307757028819942-2 chr7 118113001 118114033 + 0.307757028819942 NA intron (NM_170669, intron 3 of 4) ORR1A2-int|LTR|ERVL-MaLR 2630 NM_170669 267019 Mm.288212 NM_170669 ENSMUSG00000008683 Rps15a A630031B11Rik ribosomal protein S15A protein-coding common_peak1_60_401_0.0134677598680444_8.65778557111295_0.307757028819942 chr4 47353159 47354050 + 0.307757028819942 NA intron (NM_001312868, intron 1 of 8) CpG 382 NM_009370 21812 Mm.197552 NM_009370 ENSMUSG00000007613 Tgfbr1 ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI transforming growth factor, beta receptor I protein-coding common_peak1_494_5274_0.00460467221057392_12.3672577145872_0.307688687711527 chr4 126258527 126262102 + 0.307688687711527 NA Intergenic Intergenic -2091 NM_013718 27096 Mm.8392 NM_013718 ENSMUSG00000028847 Trappc3 1110058K12Rik|AI835942|AU019197|Bet3 trafficking protein particle complex 3 protein-coding common_peak1_26_146_0.0225352220032304_7.21093995583798_0.307654940936934 chr7 4320344 4320920 + 0.307654940936934 NA Intergenic L1VL1|LINE|L1 -17092 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak1_13_65_0.0155583194731168_6.05217327909501_0.307610466878301-3 chr17 84227679 84228074 + 0.307610466878301 NA intron (NM_183021, intron 34 of 37) intron (NM_183021, intron 34 of 37) -39929 NM_001001806 12193 Mm.259321 NM_001001806 ENSMUSG00000045817 Zfp36l2 Brf2|ERF2|Tis11d zinc finger protein 36, C3H type-like 2 protein-coding common_peak1_13_65_0.0155583194731168_6.05217327909501_0.307610466878301-2 chr14 63859899 63860287 + 0.307610466878301 NA promoter-TSS (NM_028228) promoter-TSS (NM_028228) -219 NM_028228 72400 Mm.379214 NM_028228 ENSMUSG00000021958 Pinx1 2210403I16Rik|2610028A01Rik|67-11-3|AU024023|LPTS|LPTS1 PIN2/TERF1 interacting, telomerase inhibitor 1 protein-coding common_peak1_13_65_0.0155583194731168_6.05217327909501_0.307610466878301-5 chr4 117251868 117252231 + 0.307610466878301 NA promoter-TSS (NM_001285815) promoter-TSS (NM_001285815) 98 NM_001285815 68777 Mm.331805 NM_026837 ENSMUSG00000048772 Tmem53 1110038M16Rik|1500001P22Rik|1700012A05Rik transmembrane protein 53 protein-coding unique_peak2_13_65_0.0155583194731168_6.05217327909501_0.307610466878301 chr5 124006591 124007238 + 0.307610466878301 NA intron (NM_177876, intron 3 of 3) intron (NM_177876, intron 3 of 3) 10062 NR_105999 102465625 NR_105999 ENSMUSG00000098454 Mir7032 Gm27309|mmu-mir-7032 microRNA 7032 ncRNA common_peak1_13_65_0.0155583194731168_6.05217327909501_0.307610466878301 chr10 75588293 75588699 + 0.307610466878301 NA promoter-TSS (NM_011820) promoter-TSS (NM_011820) -885 NM_011820 23887 Mm.257927 NM_011820 ENSMUSG00000006344 Ggt5 AI551243|GGL|GGT-REL|Ggtla1 gamma-glutamyltransferase 5 protein-coding unique_peak2_13_65_0.0155583194731168_6.05217327909501_0.307610466878301-2 chr9 96670068 96670518 + 0.307610466878301 NA Intergenic Intergenic -38790 NM_053268 114713 Mm.124502 NM_053268 ENSMUSG00000032413 Rasa2 5430433H21Rik|AA517451|AU023900|GAP1m RAS p21 protein activator 2 protein-coding common_peak1_13_65_0.0155583194731168_6.05217327909501_0.307610466878301-4 chr19 47887473 47887857 + 0.307610466878301 NA Intergenic Intergenic 21871 NM_026619 68214 Mm.63791 NM_026619 ENSMUSG00000025069 Gsto2 1700020F09Rik|4930425C18Rik|GSTO 2-2 glutathione S-transferase omega 2 protein-coding common_peak2_132_1064_-0.0127374024508402_10.0502690138878_0.307585399628862 chr11 109419024 109421675 + 0.307585399628862 NA Intergenic Intergenic -5597 NM_025275 13929 Mm.211850 NM_025275 ENSMUSG00000020610 Amz2 AA408420|ESTM12|X83328 archaelysin family metallopeptidase 2 protein-coding common_peak1_373_3737_0.00547913154322188_11.8707904195168_0.307553985765644 chr3 96261809 96264455 + 0.307553985765644 NA exon (NM_033596, exon 1 of 1) exon (NM_033596, exon 1 of 1) 185 NM_033596 97122 Mm.227295 NM_033596 ENSMUSG00000091405 Hist2h4 H4|X04652 histone cluster 2, H4 protein-coding common_peak1_61_419_-0.0209510017454608_8.70377001679339_0.307547058835742 chr7 128744801 128745667 + 0.307547058835742 NA intron (NM_001029982, intron 1 of 18) CpG 364 NM_001029982 207352 Mm.297105 NM_001029982 ENSMUSG00000055319 Sec23ip D7Ertd373e|p125 Sec23 interacting protein protein-coding common_peak2_162_1346_0.00831030845906788_10.3996892896918_0.307542013089669 chr1 131909839 131911745 + 0.307542013089669 NA intron (NM_001145804, intron 1 of 6) CpG 334 NM_001145804 98415 Mm.246869 NM_175294 ENSMUSG00000026434 Nucks1 2700010L10Rik|8430423A01Rik|AI647518|C78391|Nucks nuclear casein kinase and cyclin-dependent kinase substrate 1 protein-coding common_peak1_26_152_-0.0351802758530573_7.23979770476612_0.307522877809737 chr10 128459591 128460033 + 0.307522877809737 NA intron (NM_001114096, intron 1 of 28) CpG 576 NM_001114097 68094 Mm.417338 NM_198160 ENSMUSG00000025369 Smarcc2 5930405J04Rik SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 protein-coding common_peak1_26_152_-0.0351802758530573_7.23979770476612_0.307522877809737-2 chr6 30355367 30355928 + 0.307522877809737 NA Intergenic Intergenic 35363 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 protein-coding common_peak2_62_417_0.014250027870899_8.71448414601633_0.307500452348125 chr12 73285879 73287421 + 0.307500452348125 NA promoter-TSS (NM_029580) promoter-TSS (NM_029580) 61 NM_029580 76357 Mm.311344 NM_029580 ENSMUSG00000034442 Trmt5 2610027O18Rik|mKIAA1393 TRM5 tRNA methyltransferase 5 protein-coding common_peak1_62_427_-0.0198578264493641_8.73153807317646_0.307424238779598 chr1 43827221 43827777 + 0.307424238779598 NA intron (NM_026430, intron 1 of 14) CpG 209 NM_026430 67883 Mm.387202 NM_026430 ENSMUSG00000057363 Uxs1 1600025I13Rik|AI451869|AI649125|AW550562 UDP-glucuronate decarboxylase 1 protein-coding common_peak2_13_69_-0.0693305781133962_6.09461772788827_0.307416909441837 chr8 90828281 90828761 + 0.307416909441837 NA promoter-TSS (NM_177224) promoter-TSS (NM_177224) -314 NM_177224 109151 Mm.100615 NM_177224 ENSMUSG00000056608 Chd9 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308 chromodomain helicase DNA binding protein 9 protein-coding unique_peak2_13_69_-0.0693305781133962_6.09461772788827_0.307416909441837 chr2 102851623 102852236 + 0.307416909441837 NA intron (NM_009851, intron 5 of 18) intron (NM_009851, intron 5 of 18) 49736 NM_001177785 12505 Mm.423621 NM_009851 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen protein-coding common_peak1_13_69_-0.0693305781133962_6.09461772788827_0.307416909441837 chr10 67188124 67188529 + 0.307416909441837 NA intron (NM_001242396, intron 1 of 24) intron (NM_001242396, intron 1 of 24) 2576 NM_001242396 108829 Mm.23846 NM_207221 ENSMUSG00000037876 Jmjd1c 5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8 jumonji domain containing 1C protein-coding common_peak1_43_276_-0.0273321121688817_8.10007610996475_0.307370117393335-2 chr10 81606330 81606762 + 0.307370117393335 NA intron (NR_030677, intron 1 of 2) intron (NR_030677, intron 1 of 2) 238 NR_030677 268319 Mm.131825 NM_001033363 ENSMUSG00000074862 BC025920 - zinc finger protein pseudogene pseudo common_peak1_43_276_-0.0273321121688817_8.10007610996475_0.307370117393335 chr1 132317134 132318047 + 0.307370117393335 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 1465 NM_001195025 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_165_1394_-0.00993122636184651_10.4410837935356_0.307359235413531 chr2 157203358 157205353 + 0.307359235413531 NA exon (NM_001139516, exon 1 of 13) exon (NM_001139516, exon 1 of 13) 179 NM_011249 19650 Mm.244671 NM_011249 ENSMUSG00000027641 Rbl1 AW547426|PRB1|p107 retinoblastoma-like 1 (p107) protein-coding unique_peak2_27_153_0.0197782093230243_7.27667564535641_0.307354771948873 chr10 11343060 11344200 + 0.307354771948873 NA exon (NM_010146, exon 1 of 4) exon (NM_010146, exon 1 of 4) 185 NM_010146 13853 Mm.89946 NM_010146 ENSMUSG00000055493 Epm2a TG-B|Tg(TcraK,TcrbK)TG-BFlv epilepsy, progressive myoclonic epilepsy, type 2 gene alpha protein-coding unique_peak2_27_153_0.0197782093230243_7.27667564535641_0.307354771948873-2 chr2 38471937 38473037 + 0.307354771948873 NA Intergenic RMER30|DNA|hAT-Charlie -39210 NM_021606 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak2_27_153_0.0197782093230243_7.27667564535641_0.307354771948873 chr2 157446647 157447419 + 0.307354771948873 NA intron (NM_001025395, intron 2 of 13) ID_B1|SINE|B4 22740 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak2_27_153_0.0197782093230243_7.27667564535641_0.307354771948873-2 chr3 59295915 59296812 + 0.307354771948873 NA intron (NM_177855, intron 40 of 43) intron (NM_177855, intron 40 of 43) -33532 NM_027571 70839 Mm.422675 NM_027571 ENSMUSG00000036353 P2ry12 2900079B22Rik|4921504D23Rik|P2Y12 purinergic receptor P2Y, G-protein coupled 12 protein-coding common_peak1_85_624_-0.0153728981091437_9.28002593049488_0.307324143072245 chr1 180851120 180851761 + 0.307324143072245 NA intron (NM_145943, intron 1 of 6) intron (NM_145943, intron 1 of 6) 289 NM_145943 208768 Mm.272625 NM_145943 ENSMUSG00000038806 Sde2 - SDE2 telomere maintenance homolog (S. pombe) protein-coding common_peak1_111_848_0.0101686288375991_9.73470505797184_0.307277937394993 chr19 4148141 4149430 + 0.307277937394993 NA intron (NM_011778, intron 1 of 10) CpG 122 NM_011778 23789 Mm.276859 NM_011778 ENSMUSG00000024835 Coro1b - coronin, actin binding protein 1B protein-coding common_peak1_64_434_0.0120429295968059_8.77089305553449_0.307248450078161 chr9 108691980 108693074 + 0.307248450078161 NA exon (NM_008924, exon 1 of 11) exon (NM_008924, exon 1 of 11) 384 NM_008924 19087 Mm.253102 NM_008924 ENSMUSG00000032601 Prkar2a 1110061A24Rik|AI317181|AI836829|RII(alpha) protein kinase, cAMP dependent regulatory, type II alpha protein-coding common_peak2_64_434_0.0120429295968059_8.77089305553449_0.307248450078161 chr4 48472550 48473998 + 0.307248450078161 NA 5' UTR (NM_172304, exon 1 of 16) 5' UTR (NM_172304, exon 1 of 16) 148 NM_172304 269536 Mm.272025 NM_172304 ENSMUSG00000028345 Tex10 2610206N19Rik|2810462N03Rik|BC006867 testis expressed gene 10 protein-coding common_peak1_27_159_-0.0353633448694373_7.30424642245264_0.307234296341719 chr17 50171076 50171769 + 0.307234296341719 NA intron (NM_181397, intron 1 of 9) intron (NM_181397, intron 1 of 9) 19075 NM_181397 76438 Mm.41854 NM_181397 ENSMUSG00000039316 Rftn1 2310015N21Rik|AI853526 raftlin lipid raft linker 1 protein-coding common_peak1_27_159_-0.0353633448694373_7.30424642245264_0.307234296341719-2 chr6 58880503 58881141 + 0.307234296341719 NA intron (NM_028705, intron 15 of 24) RMER1C|Other|Other 26304 NM_021432 58243 Mm.389747 NM_021432 ENSMUSG00000055430 Nap1l5 1110020M21Rik nucleosome assembly protein 1-like 5 protein-coding common_peak1_86_633_-0.0155411994735548_9.30056843040263_0.307234225995805 chr19 40682951 40684256 + 0.307234225995805 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 23833 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak1_269_2528_-0.00742585675896734_11.3006383932838_0.30722928832832 chr13 54692662 54695261 + 0.30722928832832 NA promoter-TSS (NR_027396) promoter-TSS (NR_027396) -1 NR_027396 105239 Mm.25366 NM_134064 ENSMUSG00000034928 Rnf44 AI854545|mKIAA1100 ring finger protein 44 protein-coding common_peak2_112_857_0.0106856606728556_9.75017666783597_0.307212589588609 chr18 6764327 6766001 + 0.307212589588609 NA promoter-TSS (NM_181070) promoter-TSS (NM_181070) -3 NM_181070 19330 Mm.132802 NM_181070 ENSMUSG00000073639 Rab18 AA959686 RAB18, member RAS oncogene family protein-coding common_peak1_44_283_-0.0235684819400497_8.13796287853466_0.307212175716862 chr8 106211008 106211689 + 0.307212175716862 NA promoter-TSS (NM_001007567) promoter-TSS (NM_001007567) 294 NM_145404 214572 Mm.251804 NM_145404 ENSMUSG00000060098 Prmt7 4933402B05Rik|BC006705 protein arginine N-methyltransferase 7 protein-coding common_peak2_64_444_-0.0207470055208638_8.78728802309333_0.307178025148901 chr13 74521945 74523397 + 0.307178025148901 NA Intergenic Intergenic -28721 NM_146231 235956 Mm.296909 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak2_140_1142_-0.0113440846351747_10.1529376458969_0.307136081796138 chr5 113671657 113673789 + 0.307136081796138 NA Intergenic Intergenic -22333 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak2_203_1774_0.00729209022076205_10.7972493543898_0.307133073990177 chr14 31250125 31252370 + 0.307133073990177 NA promoter-TSS (NM_027949) promoter-TSS (NM_027949) -29 NM_027949 71838 Mm.5348 NM_027949 ENSMUSG00000021902 Phf7 1700006H01Rik|1700010P14Rik|AI427892|AW555949 PHD finger protein 7 protein-coding common_peak1_171_1438_0.00810091588636475_10.4949013346835_0.30712668718739 chr4 143161165 143162300 + 0.30712668718739 NA intron (NM_001081355, intron 6 of 9) CpG -25570 NR_105988 102465618 NR_105988 ENSMUSG00000106597 Mir7021 mmu-mir-7021 microRNA 7021 ncRNA common_peak2_45_283_0.0153259957751839_8.15741011739227_0.30712540684303 chr13 19189422 19190911 + 0.30712540684303 NA Intergenic Intergenic 205647 NM_024270 76205 Mm.41940 NM_024270 ENSMUSG00000003062 Stard3nl 0610035N01Rik|6530409L22Rik|AW124774|MENTHO STARD3 N-terminal like protein-coding common_peak1_113_881_-0.0135238148209904_9.77787293814703_0.307092812199619 chr19 45576571 45578765 + 0.307092812199619 NA TTS (NM_013907) TTS (NM_013907) 17053 NM_172639 226162 Mm.21978 NM_172639 ENSMUSG00000041035 Dpcd 5330431N19Rik|Ndac deleted in primary ciliary dyskinesia protein-coding common_peak2_113_881_-0.0135238148209904_9.77787293814703_0.307092812199619 chrX 8095917 8097756 + 0.307092812199619 NA promoter-TSS (NR_003632) promoter-TSS (NR_003632) -251 NR_003632 627782 Mm.305432 NM_001037930 ENSMUSG00000086404 Gm6787 EG627782 proteasome (prosome, macropain) subunit, beta type 7 pseudogene pseudo common_peak1_275_2573_0.00602360439880378_11.3328081404201_0.307092273854742 chr18 34953743 34955763 + 0.307092273854742 NA promoter-TSS (NM_010481) promoter-TSS (NM_010481) -402 NM_010481 15526 Mm.209419 NM_010481 ENSMUSG00000024359 Hspa9 74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74 heat shock protein 9 protein-coding common_peak2_28_160_0.0177464363979514_7.33979009631359_0.307080624976761 chr12 25455282 25456367 + 0.307080624976761 NA Intergenic Intergenic 326650 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_28_160_0.0177464363979514_7.33979009631359_0.307080624976761 chr12 85454651 85455260 + 0.307080624976761 NA Intergenic Intergenic -18946 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding unique_peak2_28_160_0.0177464363979514_7.33979009631359_0.307080624976761 chr19 42305912 42306964 + 0.307080624976761 NA intron (NM_145123, intron 6 of 14) intron (NM_145123, intron 6 of 14) -26268 NR_037246 100526549 NR_037246 ENSMUSG00000093234 Mir3085 mir-3085|mmu-mir-3085 microRNA 3085 ncRNA unique_peak2_28_160_0.0177464363979514_7.33979009631359_0.307080624976761-2 chr2 155572243 155573576 + 0.307080624976761 NA intron (NM_001291111, intron 7 of 11) intron (NM_001291111, intron 7 of 11) -15979 NR_040613 74945 Mm.401956 NR_040613 ENSMUSG00000086529 Acss2os 4930471I20Rik acyl-CoA synthetase short-chain family member 2, opposite strand ncRNA unique_peak2_14_71_0.0121191199690358_6.17598456142683_0.307062057408912 chr11 68545248 68545913 + 0.307062057408912 NA non-coding (NR_126154, exon 18 of 20) non-coding (NR_126154, exon 18 of 20) -10606 NM_146004 215723 Mm.131205 NM_146004 ENSMUSG00000048329 Mfsd6l - major facilitator superfamily domain containing 6-like protein-coding unique_peak2_14_71_0.0121191199690358_6.17598456142683_0.307062057408912-2 chr7 25728979 25729554 + 0.307062057408912 NA intron (NM_144922, intron 10 of 14) intron (NM_144922, intron 10 of 14) -10213 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak1_14_71_0.0121191199690358_6.17598456142683_0.307062057408912 chr19 21766757 21767158 + 0.307062057408912 NA Intergenic Intergenic -11383 NM_001033759 83921 Mm.329776 NM_031997 ENSMUSG00000024754 Tmem2 - transmembrane protein 2 protein-coding common_peak1_45_291_-0.0247514436001524_8.17744883707994_0.307041039934148 chr2 127311857 127312862 + 0.307041039934148 NA Intergenic L1MB7|LINE|L1 -23800 NM_010090 13537 Mm.4729 NM_010090 ENSMUSG00000027368 Dusp2 PAC1 dual specificity phosphatase 2 protein-coding common_peak1_45_291_-0.0247514436001524_8.17744883707994_0.307041039934148-2 chr5 120322346 120322962 + 0.307041039934148 NA Intergenic Intergenic -109232 NM_008499 16873 Mm.5151 NM_008499 ENSMUSG00000029595 Lhx5 Lim2 LIM homeobox protein 5 protein-coding common_peak2_241_2189_0.00646400133326885_11.0999471551552_0.307016517347143 chr16 96080945 96084041 + 0.307016517347143 NA promoter-TSS (NM_001103179) promoter-TSS (NM_001103179) -65 NM_145125 93871 Mm.240871 NM_145125 ENSMUSG00000022914 Brwd1 5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5 bromodomain and WD repeat domain containing 1 protein-coding common_peak1_115_886_0.00909764258421752_9.79733911559317_0.307011019983084 chr12 33429413 33430425 + 0.307011019983084 NA intron (NM_172253, intron 1 of 3) CpG 295 NM_172253 28071 Mm.196472 NM_172253 ENSMUSG00000020561 Twistnb 2410173G11|2810024J17Rik|D16Wsu83e twist basic helix-loop-helix transcription factor 1 neighbor protein-coding common_peak1_115_886_0.00909764258421752_9.79733911559317_0.307011019983084-2 chr2 167377022 167378651 + 0.307011019983084 NA Intergenic Intergenic -28658 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak1_173_1477_-0.010020412293942_10.5244203479992_0.307002475763806 chr8 13687645 13690303 + 0.307002475763806 NA Intergenic RCHARR1|DNA|hAT-Charlie -11387 NM_009025 19414 Mm.18517 NM_009025 ENSMUSG00000031453 Rasa3 AI326412|C86362|E130011G04|GAPIII|hlb381|scat RAS p21 protein activator 3 protein-coding unique_peak2_28_166_-0.0350409779614838_7.36618380349331_0.306970276066588 chr5 104021235 104022323 + 0.306970276066588 NA promoter-TSS (NM_053262) promoter-TSS (NM_053262) 17 NM_053262 114664 Mm.46019 NM_053262 ENSMUSG00000029311 Hsd17b11 Dhrs8|Pan1b|SDR2|retSDR2 hydroxysteroid (17-beta) dehydrogenase 11 protein-coding common_peak1_28_166_-0.0350409779614838_7.36618380349331_0.306970276066588 chr4 46573993 46574616 + 0.306970276066588 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) -7864 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak2_46_291_0.0133065285459999_8.19647782315302_0.306958976613087 chr9 36726107 36727471 + 0.306958976613087 NA promoter-TSS (NM_007691) promoter-TSS (NM_007691) -131 NM_007691 12649 Mm.16753 NM_007691 ENSMUSG00000032113 Chek1 C85740|Chk1|rad27 checkpoint kinase 1 protein-coding common_peak1_46_291_0.0133065285459999_8.19647782315302_0.306958976613087 chr12 12278297 12278994 + 0.306958976613087 NA intron (NM_029758, intron 2 of 12) intron (NM_029758, intron 2 of 12) 16506 NM_001146119 76820 Mm.440802 NM_029758 ENSMUSG00000020589 Fam49a 2410157M17Rik|9630047E15|D12Ertd553e family with sequence similarity 49, member A protein-coding common_peak1_90_657_0.0104012689848059_9.36714440822765_0.306952213537363 chr2 167774020 167775612 + 0.306952213537363 NA Intergenic Intergenic 83639 NR_015500 329562 Mm.123101 NM_177851 ENSMUSG00000006462 A530013C23Rik - RIKEN cDNA A530013C23 gene ncRNA common_peak1_144_1182_-0.0114654569488994_10.2025016298653_0.306928743596026 chr11 75935027 75936887 + 0.306928743596026 NA Intergenic Intergenic -10066 NM_001291159 380714 Mm.425697 NM_029548 ENSMUSG00000020847 Rph3al Gm1753|Noc2 rabphilin 3A-like (without C2 domains) protein-coding common_peak1_208_1848_-0.00878389287945325_10.8481375629645_0.306921138022259 chr3 95217025 95218308 + 0.306921138022259 NA TTS (NM_019914) TTS (NM_019914) 209 NR_108026 100504029 Mm.478537 NR_108026 ENSMUSG00000097167 Gm16740 - predicted gene, 16740 ncRNA common_peak1_209_1839_0.0067024909187996_10.8488412964038_0.306917943251341 chr5 5419510 5421196 + 0.306917943251341 NA Intergenic ORR1F|LTR|ERVL-MaLR -40102 NM_011074 18647 Mm.389061 NM_011074 ENSMUSG00000028926 Cdk14 Pftk1|mKIAA0834 cyclin-dependent kinase 14 protein-coding common_peak2_176_1490_0.00759637891166598_10.5458627317393_0.306914556754176 chr5 31287885 31292038 + 0.306914556754176 NA intron (NM_026298, intron 1 of 47) RSINE1|SINE|B4 1153 NM_026298 67661 Mm.293023 NM_026298 ENSMUSG00000038564 Ift172 4930553F24Rik|Slb|avc1|wim intraflagellar transport 172 protein-coding common_peak2_67_459_0.0112708324025075_8.85112546714563_0.306911585669559 chr12 118295736 118297788 + 0.306911585669559 NA intron (NM_009239, intron 3 of 5) intron (NM_009239, intron 3 of 5) 4678 NM_009239 20688 Mm.34699 NM_009239 ENSMUSG00000025323 Sp4 5730497N03Rik|HF-1b|HF1-b trans-acting transcription factor 4 protein-coding unique_peak2_14_75_-0.0658833920322373_6.21498581742747_0.306899018650293 chr18 61364411 61365095 + 0.306899018650293 NA intron (NM_133249, intron 1 of 11) RMER15|LTR|ERVL 35678 NM_133249 170826 Mm.415302 NM_133249 ENSMUSG00000033871 Ppargc1b 4631412G21Rik|Perc peroxisome proliferative activated receptor, gamma, coactivator 1 beta protein-coding common_peak1_14_75_-0.0658833920322373_6.21498581742747_0.306899018650293-2 chr14 25512386 25512791 + 0.306899018650293 NA intron (NM_001310666, intron 2 of 23) intron (NM_001310666, intron 2 of 23) -21851 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA unique_peak2_14_75_-0.0658833920322373_6.21498581742747_0.306899018650293-2 chr19 57988410 57989050 + 0.306899018650293 NA intron (NM_181415, intron 27 of 28) intron (NM_181415, intron 27 of 28) -62437 NR_049196 100885835 NR_049196 ENSMUSG00000093757 Mir5623 Gm26068|mir-5623|mmu-mir-5623 microRNA 5623 ncRNA common_peak1_14_75_-0.0658833920322373_6.21498581742747_0.306899018650293 chr11 116259196 116259613 + 0.306899018650293 NA intron (NM_146032, intron 8 of 15) B1_Mur2|SINE|Alu 14813 NM_146032 217337 Mm.29655 NM_146032 ENSMUSG00000020780 Srp68 2610024I03Rik signal recognition particle 68 protein-coding common_peak1_14_75_-0.0658833920322373_6.21498581742747_0.306899018650293-3 chr6 22424361 22424744 + 0.306899018650293 NA Intergenic Intergenic -68471 NM_138587 27999 Mm.490307 NM_138587 ENSMUSG00000029672 Fam3c D6Wsu176e|Ilei family with sequence similarity 3, member C protein-coding common_peak1_246_2267_-0.00783580647050464_11.143287021707_0.306839158176297 chr3 129531796 129534580 + 0.306839158176297 NA intron (NM_130450, intron 2 of 4) intron (NM_130450, intron 2 of 4) 802 NM_130450 170439 Mm.314113 NM_130450 ENSMUSG00000041220 Elovl6 C77826|FAE|LCE ELOVL family member 6, elongation of long chain fatty acids (yeast) protein-coding common_peak1_29_167_0.0163390098189424_7.40048692768823_0.306829256737597-2 chr8 3500369 3500924 + 0.306829256737597 NA intron (NM_053177, intron 1 of 13) CpG 127 NM_053177 94178 Mm.8356 NM_053177 ENSMUSG00000004567 Mcoln1 2210015I05Rik|TRPML1|mucolipidin mucolipin 1 protein-coding common_peak1_29_167_0.0163390098189424_7.40048692768823_0.306829256737597 chr1 64949681 64950305 + 0.306829256737597 NA intron (NM_001039493, intron 1 of 7) intron (NM_001039493, intron 1 of 7) 6831 NM_001039493 241075 Mm.239534 NM_175509 ENSMUSG00000051344 Plekhm3 9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l pleckstrin homology domain containing, family M, member 3 protein-coding common_peak2_47_298_0.0163861050803469_8.23219472673828_0.306820631649997 chr3 9003827 9005125 + 0.306820631649997 NA promoter-TSS (NM_001025264) promoter-TSS (NM_001025264) 39 NM_009412 21985 Mm.371590 NM_009412 ENSMUSG00000027506 Tpd52 AI043038|mD52 tumor protein D52 protein-coding common_peak1_92_675_0.00993728460540666_9.40584807858489_0.306794985474645 chr15 73739150 73740623 + 0.306794985474645 NA intron (NM_001166388, intron 1 of 5) intron (NM_001166388, intron 1 of 5) -8140 NM_008975 19245 Mm.390807 NM_008975 ENSMUSG00000059895 Ptp4a3 AV088979|Prl-3|pPtp4a3 protein tyrosine phosphatase 4a3 protein-coding common_peak2_179_1521_0.00765061643379816_10.5755779517204_0.306794975022755 chr19 6856818 6859661 + 0.306794975022755 NA promoter-TSS (NM_001081291) promoter-TSS (NM_001081291) -28 NM_001081291 78317 Mm.329596 NM_198008 ENSMUSG00000047810 Ccdc88b 2610041P08Rik|Ccdc88 coiled-coil domain containing 88B protein-coding common_peak1_147_1211_-0.0101657098888275_10.2380911285285_0.306787016731734 chr6 83325415 83326875 + 0.306787016731734 NA 5' UTR (NM_145571, exon 1 of 6) 5' UTR (NM_145571, exon 1 of 6) 106 NM_145571 232157 Mm.29500 NM_145571 ENSMUSG00000043131 Mob1a 4022402H07Rik|MOB1|MOB4B|Mobk1b|Mobkl1b MOB kinase activator 1A protein-coding common_peak1_213_1882_0.00676544592790052_10.8822000075782_0.306783771368612 chr1 133693169 133695776 + 0.306783771368612 NA Intergenic Intergenic -4364 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding common_peak1_119_924_0.00857149956674164_9.85759530518705_0.30676597413252 chr4 130901618 130902937 + 0.30676597413252 NA Intergenic Intergenic -11057 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding common_peak1_68_477_-0.0182714877339532_8.89173106411377_0.306750444705252 chr6 108665821 108666588 + 0.306750444705252 NA 3' UTR (NM_011498, exon 5 of 5) 3' UTR (NM_011498, exon 5 of 5) -5270 NR_104577 75394 Mm.395061 NR_040757 ENSMUSG00000087341 0610040F04Rik - RIKEN cDNA 0610040F04 gene ncRNA common_peak1_149_1215_0.00883450603243929_10.2523447664598_0.306730343638963 chrX 38564141 38565827 + 0.306730343638963 NA exon (NM_001110142, exon 3 of 23) exon (NM_001110142, exon 3 of 23) 11212 NM_028288 72584 Mm.327675 NM_028288 ENSMUSG00000031095 Cul4b 2700050M05Rik|AA409770|CUL-4B|mKIAA0695 cullin 4B protein-coding unique_peak2_29_173_-0.0342870632510248_7.42579996422322_0.306727809327491 chr6 90987511 90988911 + 0.306727809327491 NA Intergenic CpG 128615 NM_018815 54563 Mm.28162 NM_018815 ENSMUSG00000030091 Nup210 9830001L10|AI836801|Pom210|gp190|gp210 nucleoporin 210 protein-coding common_peak1_29_173_-0.0342870632510248_7.42579996422322_0.306727809327491 chr3 133332514 133333216 + 0.306727809327491 NA intron (NM_001293641, intron 5 of 11) B1_Mur3|SINE|Alu 22755 NM_146141 74776 Mm.210305 NM_146141 ENSMUSG00000028013 Ppa2 1110013G13Rik|Sid6306 pyrophosphatase (inorganic) 2 protein-coding common_peak1_69_475_0.013240262401947_8.90143789450892_0.306714504381655 chr8 94375175 94376378 + 0.306714504381655 NA Intergenic MLT1I|LTR|ERVL-MaLR -10724 NM_022331 64209 Mm.29151 NM_022331 ENSMUSG00000031770 Herpud1 Herp|Mifl|SUP homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein-coding common_peak2_181_1560_-0.00929746807150522_10.6036060879422_0.306683788994529 chr5 120612170 120614242 + 0.306683788994529 NA promoter-TSS (NM_028041) promoter-TSS (NM_028041) 76 NM_028041 71990 Mm.24495 NM_028041 ENSMUSG00000029599 Ddx54 2410015A15Rik|AI414901|DP97 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 protein-coding common_peak2_121_943_0.00848871287148789_9.88688740579758_0.306650829820054 chr11 52280863 52283688 + 0.306650829820054 NA intron (NM_001313981, intron 2 of 10) intron (NM_001313981, intron 2 of 10) 320 NM_009331 21414 Mm.31630 NM_009331 ENSMUSG00000000782 Tcf7 AI465550|TCF-1|Tcf1 transcription factor 7, T cell specific protein-coding common_peak2_254_2335_0.00595180512575944_11.1928004614429_0.306643078410102 chr1 84837881 84840651 + 0.306643078410102 NA promoter-TSS (NM_025386) promoter-TSS (NM_025386) 38 NM_133975 14897 Mm.209265 NM_133975 ENSMUSG00000026219 Trip12 1110036I07Rik|6720416K24Rik|AA410158|Gtl6|TRIP-12 thyroid hormone receptor interactor 12 protein-coding common_peak1_15_77_0.0108510442629193_6.29082774099371_0.306598026174992-2 chrX 100626054 100626429 + 0.306598026174992 NA promoter-TSS (NM_028303) promoter-TSS (NM_028303) 176 NM_008446 16571 Mm.383091 NM_008446 ENSMUSG00000034311 Kif4 AI323435|D330050K22Rik|Kns4 kinesin family member 4 protein-coding unique_peak2_15_77_0.0108510442629193_6.29082774099371_0.306598026174992-2 chr2 93449521 93450195 + 0.306598026174992 NA intron (NM_001136055, intron 1 of 9) intron (NM_001136055, intron 1 of 9) 2814 NM_001271462 12521 Mm.4261 NM_007656 ENSMUSG00000027215 Cd82 AA682076|AL023070|C33|IA4|Kai1|Tspan27 CD82 antigen protein-coding unique_peak2_15_77_0.0108510442629193_6.29082774099371_0.306598026174992 chr14 106456121 106456721 + 0.306598026174992 NA intron (NR_045938, intron 1 of 3) MMVL30-int|LTR|ERV1 30099 NR_045938 73631 Mm.48862 NR_045938 ENSMUSG00000099794 1700128A07Rik - RIKEN cDNA 1700128A07 gene ncRNA common_peak1_15_77_0.0108510442629193_6.29082774099371_0.306598026174992 chr11 115405621 115406019 + 0.306598026174992 NA intron (NM_026729, intron 1 of 5) intron (NM_026729, intron 1 of 5) 2054 NM_026729 68572 Mm.271062 NM_026729 ENSMUSG00000018858 Mrpl58 1110001A02Rik|1110002E03Rik|Ict1|MRP-L58 mitochondrial ribosomal protein L58 protein-coding common_peak1_48_314_-0.0223317814765949_8.28804212764898_0.306597911769583 chr1 88042772 88043536 + 0.306597911769583 NA Intergenic Intergenic -12257 NM_201641 394430 Mm.300095 NM_201641 ENSMUSG00000090165 Ugt1a10 A13|Ugt1a13 UDP glycosyltransferase 1 family, polypeptide A10 protein-coding common_peak2_256_2357_0.00625364617691382_11.2064748260682_0.306590808335846 chr1 79750022 79753657 + 0.306590808335846 NA intron (NM_001111279, intron 1 of 11) intron (NM_001111279, intron 1 of 11) 9930 NM_001111279 69368 Mm.293273 NM_027057 ENSMUSG00000073643 Wdfy1 1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435 WD repeat and FYVE domain containing 1 protein-coding common_peak2_95_702_0.00961921139227329_9.46219048476867_0.306574197271542 chr1 161803461 161805616 + 0.306574197271542 NA Intergenic Intergenic -16043 NM_010177 14103 Mm.3355 NM_010177 ENSMUSG00000000817 Fasl APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|Tnlg1a|gld Fas ligand (TNF superfamily, member 6) protein-coding common_peak1_296_2840_-0.00659413622209293_11.4688860480785_0.306546796310493 chr17 28690672 28693696 + 0.306546796310493 NA promoter-TSS (NM_001168513) promoter-TSS (NM_001168513) -384 NM_001168513 26416 Mm.311337 NM_011951 ENSMUSG00000053436 Mapk14 CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha mitogen-activated protein kinase 14 protein-coding unique_peak2_49_314_0.0134194849354614_8.30591776085501_0.306527430871781 chr5 111869792 111871674 + 0.306527430871781 NA Intergenic Intergenic -109005 NR_045833 269683 Mm.136946 NM_207252 ENSMUSG00000085271 E130006D01Rik Gm16018|Gm681|OTTMUSG00000029083 RIKEN cDNA E130006D01 gene ncRNA common_peak2_95_714_-0.0147993412009448_9.47439976106528_0.306527410481486 chr17 47562290 47565701 + 0.306527410481486 NA intron (NM_001081635, intron 1 of 6) intron (NM_001081635, intron 1 of 6) -29472 NM_007632 12445 Mm.27291 NM_007632 ENSMUSG00000034165 Ccnd3 9230106B05Rik|AA682053|AL024085|AW146355|C78795 cyclin D3 protein-coding common_peak1_153_1272_-0.0106828519419349_10.3086752779304_0.306510061306558 chr7 5079604 5080986 + 0.306510061306558 NA promoter-TSS (NM_001252454) promoter-TSS (NM_001252454) 60 NM_001252454 13854 Mm.3091 NM_010147 ENSMUSG00000035203 Epn1 AA269831|Ibp1 epsin 1 protein-coding common_peak1_30_180_-0.0331636823488992_7.48326404590876_0.306504360287252 chr1 7396861 7397548 + 0.306504360287252 NA Intergenic B1_Mus1|SINE|Alu 308284 NM_183028 319263 Mm.21539 NM_183028 ENSMUSG00000051285 Pcmtd1 8430411F12Rik|A030012M09Rik protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding unique_peak2_30_180_-0.0331636823488992_7.48326404590876_0.306504360287252 chr18 65697304 65698710 + 0.306504360287252 NA promoter-TSS (NM_177028) promoter-TSS (NM_177028) -261 NM_177028 319888 Mm.183576 NM_177028 ENSMUSG00000046610 Oacyl 5330437I02Rik|Acyl3 O-acyltransferase like protein-coding common_peak1_154_1266_0.00758698247181755_10.3109943003767_0.306501431252422 chr14 31018410 31020393 + 0.306501431252422 NA promoter-TSS (NM_153547) promoter-TSS (NM_153547) 263 NM_001081251 66923 Mm.27913 NM_025847 ENSMUSG00000042323 Pbrm1 2610016F04Rik|AI507524|BAF180|Pb1 polybromo 1 protein-coding common_peak2_123_976_-0.012307924861366_9.9260607895377_0.30650055493235 chr8 83714552 83717486 + 0.30650055493235 NA intron (NM_197982, intron 1 of 10) B1_Mur3|SINE|Alu 842 NM_197982 68278 Mm.28222 NM_197982 ENSMUSG00000005481 Ddx39 2610307C23Rik|BAT1|DDXL|Ddx39a|URH49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 protein-coding common_peak1_124_971_0.00930827540892309_9.92946664131024_0.306489327466817 chr19 6951031 6952354 + 0.306489327466817 NA 3' UTR (NM_007522, exon 4 of 4) 3' UTR (NM_007522, exon 4 of 4) 9130 NM_001285453 12015 Mm.4387 NM_007522 ENSMUSG00000024959 Bad AI325008|Bbc2 BCL2-associated agonist of cell death protein-coding common_peak1_223_1991_0.00639975150891203_10.9632018078225_0.306469561498084 chr18 12643070 12644701 + 0.306469561498084 NA 5' UTR (NM_028341, exon 1 of 14) 5' UTR (NM_028341, exon 1 of 14) 352 NM_028341 72747 Mm.52526 NM_028341 ENSMUSG00000024424 Ttc39c 1700008N02Rik|2810439F02Rik tetratricopeptide repeat domain 39C protein-coding common_peak1_71_502_-0.0165046055601472_8.96616228702545_0.306464133490208 chr6 67348193 67349289 + 0.306464133490208 NA intron (NM_008354, intron 7 of 15) B1_Mus2|SINE|Alu -9047 NM_001311141 16162 Mm.188337 NM_008354 ENSMUSG00000018341 Il12rb2 A930027I18Rik|IL-12RB2|Ifnm interleukin 12 receptor, beta 2 protein-coding common_peak1_15_81_-0.0612987414929158_6.32690263387163_0.306458818068574-4 chr9 80081642 80082087 + 0.306458818068574 NA intron (NM_001311110, intron 1 of 23) MTE-int|LTR|ERVL-MaLR 14961 NM_146003 215351 Mm.28232 NM_146003 ENSMUSG00000034252 Senp6 2810017C20Rik|E130319N12Rik|Susp1|mKIAA0797 SUMO/sentrin specific peptidase 6 protein-coding common_peak1_15_81_-0.0612987414929158_6.32690263387163_0.306458818068574-3 chr7 126271931 126272340 + 0.306458818068574 NA promoter-TSS (NM_145587) promoter-TSS (NM_145587) -484 NM_145587 104175 Mm.29660 NM_145587 ENSMUSG00000042978 Sbk1 Sbk SH3-binding kinase 1 protein-coding unique_peak2_15_81_-0.0612987414929158_6.32690263387163_0.306458818068574-4 chr12 110850261 110850863 + 0.306458818068574 NA exon (NM_001199785, exon 1 of 7) exon (NM_001199785, exon 1 of 7) 283 NM_028365 72805 Mm.443524 NM_028365 ENSMUSG00000021271 Zfp839 2810455K09Rik zinc finger protein 839 protein-coding unique_peak2_15_81_-0.0612987414929158_6.32690263387163_0.306458818068574-5 chr4 101221635 101222445 + 0.306458818068574 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 43242 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding unique_peak2_15_81_-0.0612987414929158_6.32690263387163_0.306458818068574 chr10 117755088 117755754 + 0.306458818068574 NA intron (NM_134010, intron 26 of 27) intron (NM_134010, intron 26 of 27) -9063 NM_029875 215436 Mm.256753 NM_029875 ENSMUSG00000060181 Slc35e3 9330166G04Rik|AI481200 solute carrier family 35, member E3 protein-coding common_peak2_15_81_-0.0612987414929158_6.32690263387163_0.306458818068574 chr13 21506090 21506607 + 0.306458818068574 NA intron (NR_026798, intron 1 of 1) intron (NR_026798, intron 1 of 1) 176 NR_026798 100038371 Mm.133328 NR_026798 Zfp389 ENSMUSG00000075041|OTTMUSG00000018077 zinc finger protein 389 pseudo common_peak1_15_81_-0.0612987414929158_6.32690263387163_0.306458818068574-2 chr7 90307192 90307569 + 0.306458818068574 NA intron (NM_001289583, intron 1 of 19) intron (NM_001289583, intron 1 of 19) 5025 NR_110348 83671 Mm.26751 NM_031394 ENSMUSG00000030616 Sytl2 AI266830|Slp2|mKIAA1597 synaptotagmin-like 2 protein-coding common_peak2_15_81_-0.0612987414929158_6.32690263387163_0.306458818068574-2 chrX 98106299 98106999 + 0.306458818068574 NA Intergenic IAPEz-int|LTR|ERVK -42108 NM_013476 11835 Mm.39005 NM_013476 ENSMUSG00000046532 Ar AW320017|Tfm androgen receptor protein-coding unique_peak2_15_81_-0.0612987414929158_6.32690263387163_0.306458818068574-2 chr11 67497218 67498093 + 0.306458818068574 NA Intergenic ID_B1|SINE|B4 -35343 NM_008088 14457 Mm.40338 NM_008088 ENSMUSG00000033066 Gas7 AW124766|B230343A10Rik|Gas7-cb growth arrest specific 7 protein-coding common_peak1_15_81_-0.0612987414929158_6.32690263387163_0.306458818068574 chr4 130924060 130924443 + 0.306458818068574 NA intron (NM_010686, intron 1 of 7) intron (NM_010686, intron 1 of 7) 10917 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding unique_peak2_15_81_-0.0612987414929158_6.32690263387163_0.306458818068574-3 chr12 21472844 21473440 + 0.306458818068574 NA Intergenic MTD|LTR|ERVL-MaLR -55706 NM_011739 22630 Mm.289630 NM_011739 ENSMUSG00000076432 Ywhaq 2700028P07Rik|AA409740|AU021156|R74690 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein-coding common_peak2_50_322_0.0122804224335322_8.34153056591069_0.306391689985173 chr17 35823216 35824061 + 0.306391689985173 NA TTS (NM_133662) TTS (NM_133662) 281 NM_008027 14251 Mm.2931 NM_008027 ENSMUSG00000059714 Flot1 reggie-2 flotillin 1 protein-coding common_peak1_31_181_0.0150709341128277_7.51533010725511_0.306384371480997-2 chrX 37191066 37191767 + 0.306384371480997 NA promoter-TSS (NM_019443) promoter-TSS (NM_019443) -178 NM_019443 54405 Mm.34869 NM_019443 ENSMUSG00000016427 Ndufa1 1810049F12Rik|MWFE NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 protein-coding common_peak1_31_181_0.0150709341128277_7.51533010725511_0.306384371480997 chr1 193337804 193338453 + 0.306384371480997 NA intron (NM_001277928, intron 18 of 22) L2b|LINE|L2 32154 NM_144817 215303 Mm.40329 NM_144817 ENSMUSG00000016179 Camk1g CLICK-III|CaMKIgamma calcium/calmodulin-dependent protein kinase I gamma protein-coding common_peak1_305_2922_0.00518349066104307_11.5158258591366_0.306369685652802 chr3 103019531 103021942 + 0.306369685652802 NA intron (NM_001161854, intron 1 of 18) CpG 190 NM_144901 229663 Mm.277713 NM_144901 ENSMUSG00000068823 Csde1 AA960392|BC016898|D3Jfr1|mKIAA0885|unr cold shock domain containing E1, RNA binding protein-coding common_peak2_349_3446_0.0050380292209411_11.7536445979777_0.306344681459838 chr1 152901642 152905240 + 0.306344681459838 NA promoter-TSS (NM_001160256) promoter-TSS (NM_001160256) -795 NM_001005507 226517 Mm.270775 NM_001005507 ENSMUSG00000042772 Smg7 9430023P16Rik|mKIAA0250 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) protein-coding common_peak1_127_1000_0.00886393784824335_9.97165822776011_0.306331558383915 chr13 24512968 24515003 + 0.306331558383915 NA Intergenic Intergenic -68204 NM_001286100 193385 Mm.217319 NM_029679 ENSMUSG00000036006 Fam65b - family with sequence similarity 65, member B protein-coding common_peak1_50_330_-0.0230166296797609_8.35917909196734_0.306326302653669 chr16 4939114 4939791 + 0.306326302653669 NA non-coding (NR_037666, exon 1 of 3) non-coding (NR_037666, exon 1 of 3) 133 NR_037666 100503704 Mm.480572 NR_037666 ENSMUSG00000097397 Gm16861 - predicted gene, 16861 ncRNA common_peak1_98_741_-0.0138209128066382_9.52836492021748_0.306326284419542 chrX 85869658 85871352 + 0.306326284419542 NA intron (NM_001163539, intron 1 of 1) intron (NM_001163539, intron 1 of 1) 232 NM_001163539 71398 Mm.185296 NM_001163539 ENSMUSG00000025058 5430427O19Rik - RIKEN cDNA 5430427O19 gene protein-coding common_peak1_31_187_-0.0317232773661136_7.53872721299458_0.30629777589915 chr3 59119565 59120064 + 0.30629777589915 NA intron (NM_001287119, intron 1 of 2) intron (NM_001287119, intron 1 of 2) 10948 NM_001008497 140795 Mm.439021 NM_133200 ENSMUSG00000036381 P2ry14 A330108O13Rik|Gpr105|P2Y14 purinergic receptor P2Y, G-protein coupled, 14 protein-coding unique_peak2_31_187_-0.0317232773661136_7.53872721299458_0.30629777589915 chr11 68498076 68499564 + 0.30629777589915 NA TTS (NM_177320) TTS (NM_177320) -4199 NM_001004435 104709 Mm.234573 NM_001004435 ENSMUSG00000046207 Pik3r6 BB220380|p84|p84 PIKAP|p87(PIKAP)|p87PIKAP phosphoinositide-3-kinase, regulatory subunit 6 protein-coding common_peak1_229_2057_0.00615143526421491_11.0101029845261_0.306295452836566 chr5 140505605 140507312 + 0.306295452836566 NA intron (NM_021528, intron 1 of 1) intron (NM_021528, intron 1 of 1) 849 NM_021528 59031 Mm.28934 NM_021528 ENSMUSG00000036599 Chst12 AI595374|C4S-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding common_peak2_73_519_-0.0159718506306881_9.01438188771311_0.306285273709598 chr7 64872077 64873521 + 0.306285273709598 NA exon (NM_023239, exon 1 of 1) exon (NM_023239, exon 1 of 1) 241 NM_023239 66647 Mm.19944 NM_023239 ENSMUSG00000070520 Ndnl2 5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|Nsmce3|mage-g1 necdin-like 2 protein-coding common_peak2_128_1010_0.00829440450421792_9.98571448415512_0.306279248724995 chr14 75753474 75755100 + 0.306279248724995 NA exon (NM_177381, exon 1 of 23) exon (NM_177381, exon 1 of 23) 206 NM_177381 338337 Mm.86507 NM_177381 ENSMUSG00000034893 Cog3 E430004N23 component of oligomeric golgi complex 3 protein-coding common_peak1_51_330_0.0113461490200706_8.37636048131725_0.306262490949385-2 chr8 10461455 10462244 + 0.306262490949385 NA intron (NM_001081397, intron 20 of 35) intron (NM_001081397, intron 20 of 35) 307926 NM_001081397 244281 Mm.422761 NM_001081397 ENSMUSG00000039057 Myo16 BM140241|C230040D10Rik|Gm1105|NYAP3|mKIAA0865 myosin XVI protein-coding common_peak1_51_330_0.0113461490200706_8.37636048131725_0.306262490949385 chr15 72929338 72930096 + 0.306262490949385 NA intron (NM_001164641, intron 15 of 17) intron (NM_001164641, intron 15 of 17) -119393 NR_002864 353342 Mm.440245 NR_002864 ENSMUSG00000106847 Peg13 - paternally expressed 13 ncRNA unique_peak2_16_83_0.0112188381954113_6.39792684187647_0.306200290196897 chr19 46522598 46523235 + 0.306200290196897 NA Intergenic B2_Mm1a|SINE|B2 21268 NM_053100 93679 Mm.392177 NM_053100 ENSMUSG00000025034 Trim8 AA408830|BB006755|GERP|Rnf27 tripartite motif-containing 8 protein-coding unique_peak2_16_83_0.0112188381954113_6.39792684187647_0.306200290196897-2 chr2 153443847 153444526 + 0.306200290196897 NA intron (NM_001134300, intron 4 of 10) CpG 293 NM_001001986 329540 Mm.50600 NM_001001986 ENSMUSG00000061411 Nol4l 4931410H15|8430427H17Rik|AI429157|Gm1636 nucleolar protein 4-like protein-coding common_peak1_16_83_0.0112188381954113_6.39792684187647_0.306200290196897-3 chrX 152327096 152327446 + 0.306200290196897 NA intron (NR_040270, intron 1 of 2) intron (NR_040270, intron 1 of 2) 222 NR_040269 72997 Mm.254833 NR_040269 Kantr 2810454L23Rik|2900056M20Rik|Spasm Kdm5c adjacent non-coding transcript ncRNA common_peak1_16_83_0.0112188381954113_6.39792684187647_0.306200290196897-2 chr6 52703668 52704135 + 0.306200290196897 NA Intergenic Intergenic -9828 NM_025816 52440 Mm.389757 NM_025816 ENSMUSG00000004535 Tax1bp1 1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151 Tax1 (human T cell leukemia virus type I) binding protein 1 protein-coding common_peak1_16_83_0.0112188381954113_6.39792684187647_0.306200290196897 chr13 37637324 37637735 + 0.306200290196897 NA Intergenic Intergenic -188509 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding unique_peak2_51_338_-0.0231079073090559_8.39358750948182_0.306200198598698 chr3 154191864 154193626 + 0.306200198598698 NA intron (NM_001081263, intron 2 of 21) intron (NM_001081263, intron 2 of 21) 137815 NM_010713 16875 Mm.15530 NM_010713 ENSMUSG00000096225 Lhx8 L3|Lhx7 LIM homeobox protein 8 protein-coding common_peak1_129_1034_-0.0118882208674354_10.009470941953_0.306192652269285 chr18 38249677 38250921 + 0.306192652269285 NA promoter-TSS (NR_015475) promoter-TSS (NR_015475) 50 NM_024179 66839 Mm.281086 NM_024179 ENSMUSG00000024442 0610009O20Rik 2700004E22Rik|Dele|Kiaa0141 RIKEN cDNA 0610009O20 gene protein-coding common_peak2_32_188_0.0150775234398068_7.56978118594098_0.306186580301265 chrX 20658233 20659399 + 0.306186580301265 NA intron (NM_001276317, intron 1 of 25) intron (NM_001276317, intron 1 of 25) 312 NM_001276317 22201 Mm.1104 NM_009457 ENSMUSG00000001924 Uba1 A1S9|Sbx|Ube-1|Ube1x ubiquitin-like modifier activating enzyme 1 protein-coding common_peak1_32_188_0.0150775234398068_7.56978118594098_0.306186580301265 chr5 38884595 38885191 + 0.306186580301265 NA Intergenic ORR1B1-int|LTR|ERVL-MaLR -8200 NM_013748 27278 Mm.440845 NM_013748 ENSMUSG00000039315 Clnk MIST cytokine-dependent hematopoietic cell linker protein-coding common_peak1_101_756_0.0101335983280801_9.56921628914977_0.306179746012738 chr2 90904008 90905247 + 0.306179746012738 NA promoter-TSS (NM_026688) promoter-TSS (NM_026688) 94 NM_026688 68349 Mm.30113 NM_026688 ENSMUSG00000005510 Ndufs3 0610010M09Rik|CI-30kD NADH dehydrogenase (ubiquinone) Fe-S protein 3 protein-coding common_peak2_52_337_0.0148623291609287_8.40831060086265_0.306154444057374 chr4 135894995 135896630 + 0.306154444057374 NA intron (NM_009924, intron 1 of 1) intron (NM_009924, intron 1 of 1) 623 NM_009924 12802 Mm.297251 NM_009924 ENSMUSG00000062585 Cnr2 CB-2|CB2|CB2-R cannabinoid receptor 2 (macrophage) protein-coding common_peak2_131_1039_0.00817675700513654_10.026456191531_0.306133225781777 chr8 85431300 85433566 + 0.306133225781777 NA intron (NM_025722, intron 1 of 3) CpG 408 NR_033144 66714 Mm.272748 NM_025722 ENSMUSG00000036934 4921524J17Rik - RIKEN cDNA 4921524J17 gene protein-coding common_peak2_32_194_-0.0300103660887308_7.59232513070524_0.306106216303661 chr13 18717231 18717708 + 0.306106216303661 NA intron (NM_172120, intron 1 of 28) intron (NM_172120, intron 1 of 28) 177 NM_172120 218035 Mm.27389 NM_172120 ENSMUSG00000041236 Vps41 AI317346|Vam2|mVam2 VPS41 HOPS complex subunit protein-coding common_peak1_32_194_-0.0300103660887308_7.59232513070524_0.306106216303661 chr2 4919001 4919567 + 0.306106216303661 NA intron (NM_010726, intron 1 of 8) intron (NM_010726, intron 1 of 8) 288 NM_010726 16922 Mm.391704 NM_010726 ENSMUSG00000026664 Phyh AI256161|AI265699|Lnap1|PAHX phytanoyl-CoA hydroxylase protein-coding common_peak1_32_194_-0.0300103660887308_7.59232513070524_0.306106216303661-2 chr7 25277758 25278416 + 0.306106216303661 NA intron (NM_001302811, intron 2 of 20) intron (NM_001302811, intron 2 of 20) -4092 NM_027882 71722 Mm.28833 NM_027882 ENSMUSG00000005442 Cic 1200010B10Rik|mKIAA0306 capicua transcriptional repressor protein-coding common_peak2_131_1053_-0.0111145816036231_10.0361018608354_0.306099187912389 chr1 74586842 74588880 + 0.306099187912389 NA promoter-TSS (NM_025784) promoter-TSS (NM_025784) 167 NM_001310668 77264 Mm.207298 NM_029888 ENSMUSG00000026135 Zfp142 9330177B18Rik|BB154236|mKIAA0236 zinc finger protein 142 protein-coding common_peak2_52_345_-0.0188864621936133_8.42518499653992_0.306094683044896 chr13 55714404 55715322 + 0.306094683044896 NA intron (NM_175150, intron 1 of 4) CpG 213 NM_175150 69672 Mm.294457 NM_175150 ENSMUSG00000021497 Txndc15 2310047H23Rik|AI854086|C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding common_peak2_318_3099_-0.00600777252117801_11.595048613901_0.306084832764049 chr6 114880220 114886375 + 0.306084832764049 NA intron (NM_177683, intron 2 of 4) intron (NM_177683, intron 2 of 4) 38455 NM_177683 232334 Mm.268357 NM_177683 ENSMUSG00000030315 Vgll4 BC048841|VGL-4 vestigial like family member 4 protein-coding unique_peak2_16_87_-0.0558953576631254_6.43148393980573_0.306080045305055 chr10 86730675 86731442 + 0.306080045305055 NA exon (NM_001003910, exon 6 of 16) exon (NM_001003910, exon 6 of 16) 18293 NM_153595 103220 Mm.440762 NM_153595 ENSMUSG00000044937 Ttc41 AI449705|AU041509|Gnn tetratricopeptide repeat domain 41 protein-coding unique_peak2_16_87_-0.0558953576631254_6.43148393980573_0.306080045305055-2 chr14 25565286 25565988 + 0.306080045305055 NA intron (NM_001310666, intron 3 of 23) MIR3|SINE|MIR -21167 NR_033492 77592 Mm.444871 NM_175264 4931406H21Rik - RIKEN cDNA 4931406H21 gene ncRNA unique_peak2_16_87_-0.0558953576631254_6.43148393980573_0.306080045305055-3 chr18 38592405 38593101 + 0.306080045305055 NA intron (NM_011898, intron 1 of 1) intron (NM_011898, intron 1 of 1) 8515 NM_011898 24066 Mm.42038 NM_011898 ENSMUSG00000024427 Spry4 A030006O18Rik|sprouty4 sprouty homolog 4 (Drosophila) protein-coding common_peak1_16_87_-0.0558953576631254_6.43148393980573_0.306080045305055-2 chr5 72811431 72811863 + 0.306080045305055 NA intron (NM_013689, intron 3 of 17) intron (NM_013689, intron 3 of 17) 56801 NM_001113461 21682 Mm.319581 NM_013689 ENSMUSG00000029217 Tec - tec protein tyrosine kinase protein-coding common_peak1_16_87_-0.0558953576631254_6.43148393980573_0.306080045305055 chr12 70231749 70232217 + 0.306080045305055 NA intron (NR_045174, intron 1 of 4) intron (NR_045174, intron 1 of 4) 4142 NR_045174 414124 Mm.416164 NR_045174 ENSMUSG00000085298 F730035M05Rik - RIKEN cDNA F730035M05 gene ncRNA common_peak2_102_778_-0.0139316342849298_9.5985137009192_0.306073428048895 chr11 106255213 106256938 + 0.306073428048895 NA promoter-TSS (NM_008950) promoter-TSS (NM_008950) -110 NM_008950 19184 Mm.272361 NM_008950 ENSMUSG00000020708 Psmc5 mSUG1 protease (prosome, macropain) 26S subunit, ATPase 5 protein-coding common_peak2_165_1377_0.00775800765041268_10.4322391765295_0.306061654915003 chr17 8164465 8166358 + 0.306061654915003 NA promoter-TSS (NM_201230) promoter-TSS (NM_201230) -107 NM_001197046 75296 Mm.227250 NM_201230 ENSMUSG00000069135 Fgfr1op 4930553O10Rik|FOP Fgfr1 oncogene partner protein-coding common_peak2_133_1058_0.00866913734374286_10.0528214426642_0.306041881714918 chr18 38249572 38251174 + 0.306041881714918 NA promoter-TSS (NR_015475) promoter-TSS (NR_015475) 124 NM_024179 66839 Mm.281086 NM_024179 ENSMUSG00000024442 0610009O20Rik 2700004E22Rik|Dele|Kiaa0141 RIKEN cDNA 0610009O20 gene protein-coding common_peak2_53_345_0.0141916503892254_8.44172405283134_0.306036299831114 chr11 120948286 120949624 + 0.306036299831114 NA promoter-TSS (NM_001038654) promoter-TSS (NM_001038654) -112 NM_001038653 80879 Mm.28632 NM_030696 ENSMUSG00000025161 Slc16a3 Mct3|Mct4 solute carrier family 16 (monocarboxylic acid transporters), member 3 protein-coding common_peak2_76_545_-0.0160356001467861_9.08473934084646_0.306033406021756 chr5 3893014 3894292 + 0.306033406021756 NA intron (NM_172135, intron 1 of 1) intron (NM_172135, intron 1 of 1) 280 NM_001013023 545725 Mm.99593 NM_172135 ENSMUSG00000040429 Mterf1a 4931431L11Rik|9230106K09Rik|Mterf|Mterf1|mTERF1b mitochondrial transcription termination factor 1a protein-coding common_peak1_33_195_0.0154387280453188_7.62242920813787_0.306002881540067 chr4 88799578 88800301 + 0.306002881540067 NA promoter-TSS (NM_001161610) promoter-TSS (NM_001161610) 364 NM_001085533 545652 Mm.457965 NM_001085533 ENSMUSG00000099518 Gm13275 OTTMUSG00000011268 predicted gene 13275 protein-coding common_peak1_33_195_0.0154387280453188_7.62242920813787_0.306002881540067-2 chr6 89042439 89043134 + 0.306002881540067 NA Intergenic Intergenic -53329 NM_175017 232217 Mm.281744 NM_175017 ENSMUSG00000055403 4933427D06Rik - RIKEN cDNA 4933427D06 gene ncRNA common_peak2_33_195_0.0154387280453188_7.62242920813787_0.306002881540067 chr6 108835616 108836805 + 0.306002881540067 NA intron (NM_138677, intron 1 of 11) intron (NM_138677, intron 1 of 11) 7569 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding common_peak1_104_784_0.00903138689782956_9.62106453722791_0.305996526544793 chr11 102284861 102285734 + 0.305996526544793 NA 5' UTR (NM_001302505, exon 1 of 3) 5' UTR (NM_001302505, exon 1 of 3) 358 NM_001302505 72053 Mm.101274 NM_028076 ENSMUSG00000034757 Tmub2 2010008E23Rik transmembrane and ubiquitin-like domain containing 2 protein-coding common_peak1_134_1082_-0.0105043738904111_10.0755653406631_0.305962880914419 chr10 67536009 67537329 + 0.305962880914419 NA Intergenic CpG -1200 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding unique_peak2_33_201_-0.0280629105912675_7.64418002745616_0.305928099881294 chr7 105948280 105949852 + 0.305928099881294 NA intron (NM_029000, intron 1 of 3) Lx3_Mus|LINE|L1 4901 NM_001243040 100042856 Mm.425473 NM_001243039 ENSMUSG00000078606 Gm4070 VLIG-1 predicted gene 4070 protein-coding common_peak1_54_353_0.0136854683029188_8.47444828423446_0.305923480501295 chr13 99344136 99344701 + 0.305923480501295 NA promoter-TSS (NM_173757) promoter-TSS (NM_173757) 260 NM_026873 68927 Mm.276502 NM_026873 ENSMUSG00000021650 Ptcd2 1190005P08Rik pentatricopeptide repeat domain 2 protein-coding common_peak2_54_361_-0.0185548686972901_8.49056845273456_0.305868956426373 chr15 80216259 80217418 + 0.305868956426373 NA Intergenic Intergenic -17242 NM_178719 239555 Mm.307163 NM_178719 ENSMUSG00000022412 Mief1 A230016E22|AI452372|Smcr7l mitochondrial elongation factor 1 protein-coding common_peak1_54_361_-0.0185548686972901_8.49056845273456_0.305868956426373 chr2 25549723 25550510 + 0.305868956426373 NA Intergenic Intergenic -3176 NM_009422 22030 Mm.3399 NM_009422 ENSMUSG00000026942 Traf2 AI325259 TNF receptor-associated factor 2 protein-coding common_peak1_17_89_0.0128322655429924_6.49826922910117_0.305855589202214 chr11 21570122 21570533 + 0.305855589202214 NA intron (NM_001316675, intron 1 of 8) intron (NM_001316675, intron 1 of 8) 1607 NM_008618 17449 Mm.212703 NM_008618 ENSMUSG00000020321 Mdh1 B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2 malate dehydrogenase 1, NAD (soluble) protein-coding common_peak1_17_89_0.0128322655429924_6.49826922910117_0.305855589202214-2 chr17 83823073 83823547 + 0.305855589202214 NA Intergenic Intergenic 23480 NM_025325 107766 Mm.30100 NM_025325 ENSMUSG00000000673 Haao 0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding common_peak1_17_89_0.0128322655429924_6.49826922910117_0.305855589202214-4 chr8 117500722 117501198 + 0.305855589202214 NA intron (NM_172285, intron 1 of 32) intron (NM_172285, intron 1 of 32) 2669 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak1_17_89_0.0128322655429924_6.49826922910117_0.305855589202214-3 chr3 52104626 52105083 + 0.305855589202214 NA 5' UTR (NM_001004176, exon 1 of 5) 5' UTR (NM_001004176, exon 1 of 5) 152 NM_001004176 433586 Mm.234972 NM_001004176 ENSMUSG00000061143 Maml3 AV234550|BC049812|Mam-2|mKIAA1816 mastermind like 3 (Drosophila) protein-coding common_peak2_34_202_0.0161097973383573_7.67339081585436_0.305831820887652 chr2 144299767 144300940 + 0.305831820887652 NA Intergenic L1MC5|LINE|L1 29449 NM_001289630 74528 Mm.386817 NM_028984 ENSMUSG00000027424 Mgme1 8430406I07Rik|AI426476 mitochondrial genome maintainance exonuclease 1 protein-coding common_peak1_34_202_0.0161097973383573_7.67339081585436_0.305831820887652 chr1 13426316 13426943 + 0.305831820887652 NA Intergenic Intergenic -52546 NM_008678 17978 Mm.2537 NM_008678 ENSMUSG00000005886 Ncoa2 D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding common_peak1_79_571_-0.0155124867749006_9.15211509339094_0.305804576597075 chr8 72268036 72269187 + 0.305804576597075 NA Intergenic Intergenic 28479 NM_007456 11767 Mm.290086 NM_007456 ENSMUSG00000003033 Ap1m1 AA408894|AP47|Adtm1A|Cltnm|mu1A adaptor-related protein complex AP-1, mu subunit 1 protein-coding common_peak2_79_571_-0.0155124867749006_9.15211509339094_0.305804576597075 chr17 24162590 24164368 + 0.305804576597075 NA TTS (NR_037854) TTS (NR_037854) 254 NM_172935 245847 Mm.87319 NM_172935 ENSMUSG00000036820 Amdhd2 5730457F11Rik amidohydrolase domain containing 2 protein-coding common_peak2_107_824_-0.0128181199208708_9.68184124917274_0.305790847108494 chrX 7721398 7722915 + 0.305790847108494 NA promoter-TSS (NM_172372) promoter-TSS (NM_172372) -64 NM_172372 54636 Mm.305725 NM_172372 ENSMUSG00000039382 Wdr45 C79260|DXImx38e|JM5|Sfc19|WIPI-4|Wdrx1 WD repeat domain 45 protein-coding common_peak2_80_570_0.00899514763003495_9.16184450917786_0.305771216866707 chr11 82889569 82890771 + 0.305771216866707 NA intron (NM_001277938, intron 1 of 9) intron (NM_001277938, intron 1 of 9) 454 NR_102719 19364 Mm.9286 NM_011235 ENSMUSG00000018841 Rad51d R51H3|Rad51l3|TRAD|Trad-d5 RAD51 paralog D protein-coding common_peak1_34_208_-0.0259134175573488_7.69440242330221_0.305762059478591 chr11 107421030 107421562 + 0.305762059478591 NA intron (NM_145823, intron 1 of 9) RSINE1|SINE|B4 49424 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_34_208_-0.0259134175573488_7.69440242330221_0.305762059478591-2 chr5 8677675 8678323 + 0.305762059478591 NA intron (NM_011076, intron 4 of 27) intron (NM_011076, intron 4 of 27) 17907 NM_011076 18671 Mm.207354 NM_011076 ENSMUSG00000040584 Abcb1a Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3 ATP-binding cassette, sub-family B (MDR/TAP), member 1A protein-coding common_peak2_336_3314_-0.00561033985631987_11.6919879850718_0.30575629854303 chr6 54815813 54820838 + 0.30575629854303 NA intron (NM_199143, intron 1 of 4) B1_Mus2|SINE|Alu 1409 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_17_93_-0.0499034898049704_6.52963710677515_0.305750680817275-2 chr11 97803544 97803963 + 0.305750680817275 NA intron (NM_010688, intron 1 of 6) B1F2|SINE|Alu 4081 NM_010688 16796 Mm.271967 NM_010688 ENSMUSG00000038366 Lasp1 AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma LIM and SH3 protein 1 protein-coding common_peak1_17_93_-0.0499034898049704_6.52963710677515_0.305750680817275-6 chr7 58454819 58455248 + 0.305750680817275 NA Intergenic Intergenic -203169 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_17_93_-0.0499034898049704_6.52963710677515_0.305750680817275-4 chr2 167271885 167272276 + 0.305750680817275 NA Intergenic RLTR14|LTR|ERV1 -31543 NM_008968 19223 Mm.2339 NM_008968 ENSMUSG00000017969 Ptgis Cyp8|Cyp8a1|Pgis prostaglandin I2 (prostacyclin) synthase protein-coding common_peak1_17_93_-0.0499034898049704_6.52963710677515_0.305750680817275-5 chr4 46553723 46554145 + 0.305750680817275 NA intron (NM_001164804, intron 2 of 11) intron (NM_001164804, intron 2 of 11) 12506 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding common_peak1_17_93_-0.0499034898049704_6.52963710677515_0.305750680817275-3 chr18 6241681 6242117 + 0.305750680817275 NA promoter-TSS (NM_008448) promoter-TSS (NM_008448) -375 NM_008448 16573 Mm.223744 NM_008448 ENSMUSG00000006740 Kif5b AL022807|Khc|Khcs|Kns1|Ukhc kinesin family member 5B protein-coding unique_peak2_17_93_-0.0499034898049704_6.52963710677515_0.305750680817275 chr15 77446576 77447389 + 0.305750680817275 NA intron (NM_001024848, intron 1 of 4) intron (NM_001024848, intron 1 of 4) 478 NM_001024848 278679 Mm.440965 NM_001024848 ENSMUSG00000068252 Apol7b - apolipoprotein L 7b protein-coding common_peak1_17_93_-0.0499034898049704_6.52963710677515_0.305750680817275 chr10 116930500 116930985 + 0.305750680817275 NA intron (NM_001003950, intron 3 of 9) L1MC|LINE|L1 19638 NM_001003950 216363 Mm.336394 NM_001003950 ENSMUSG00000064181 Rab3ip B230311A06|Gtpat12|Rabin3 RAB3A interacting protein protein-coding common_peak2_110_840_0.00795617710955199_9.71994007880992_0.305666601342731 chr1 86064107 86065459 + 0.305666601342731 NA 5' UTR (NM_027357, exon 1 of 25) 5' UTR (NM_027357, exon 1 of 25) 164 NM_027357 70247 Mm.280013 NM_027357 ENSMUSG00000026229 Psmd1 2410026J11Rik|P112|S1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 protein-coding common_peak1_81_588_-0.0140682475786775_9.19508970004112_0.305665945722846 chr5 137627827 137628780 + 0.305665945722846 NA promoter-TSS (NM_001168652) promoter-TSS (NM_001168652) -820 NM_146164 231798 Mm.200763 NM_146164 ENSMUSG00000029720 Lrch4 2810008P14Rik|2900069C24Rik|AI558103|LRN|LRRN4|SAP25|mFLJ00248 leucine-rich repeats and calponin homology (CH) domain containing 4 protein-coding common_peak1_142_1161_-0.0102040068221019_10.1772923499935_0.305626207767508 chr1 52630552 52631683 + 0.305626207767508 NA intron (NR_024590, intron 1 of 8) intron (NR_024590, intron 1 of 8) 412 NM_001142647 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding common_peak1_57_377_0.0130332014778531_8.56875902496_0.305613599859869 chr5 122342766 122343803 + 0.305613599859869 NA intron (NM_144912, intron 5 of 10) RSINE1|SINE|B4 10911 NM_144912 231724 Mm.255587 NM_144912 ENSMUSG00000038569 Rad9b A630082N15Rik|BC021784 RAD9 checkpoint clamp component B protein-coding common_peak2_57_377_0.0130332014778531_8.56875902496_0.305613599859869 chr2 30699819 30700832 + 0.305613599859869 NA Intergenic ID_B1|SINE|B4 -20885 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_35_215_-0.023589829104445_7.74309258761125_0.305606907249062-2 chrX 8192357 8193075 + 0.305606907249062 NA intron (NM_007898, intron 1 of 4) CpG 796 NM_007898 13595 Mm.27183 NM_007898 ENSMUSG00000031168 Ebp AI255399|Pabp|SI|Td|mSI phenylalkylamine Ca2+ antagonist (emopamil) binding protein protein-coding common_peak1_35_215_-0.023589829104445_7.74309258761125_0.305606907249062 chr1 180392355 180392907 + 0.305606907249062 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -62082 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_143_1171_-0.0102345589905131_10.189639574927_0.30558683966605 chr14 59440255 59441786 + 0.30558683966605 NA promoter-TSS (NM_026908) promoter-TSS (NM_026908) 39 NM_026908 69008 Mm.179091 NM_026908 ENSMUSG00000021981 Cab39l 1500031K13Rik|2810425O13Rik|4930520C08Rik|AA589432|MO2L calcium binding protein 39-like protein-coding common_peak2_57_385_-0.0171814115691546_8.5838663314835_0.305565728883077 chr3 135578899 135581206 + 0.305565728883077 NA Intergenic Intergenic 94441 NM_027288 110173 Mm.280536 NM_027288 ENSMUSG00000028164 Manba 2410030O07Rik|B930014J03Rik|Bmn mannosidase, beta A, lysosomal protein-coding common_peak1_83_596_0.00911214490640511_9.22614319371801_0.30556524780334 chrX 167179866 167181480 + 0.30556524780334 NA Intergenic Intergenic 28545 NM_021278 19241 Mm.142729 NM_021278 ENSMUSG00000049775 Tmsb4x Ptmb4|Tb4 thymosin, beta 4, X chromosome protein-coding unique_peak2_18_95_0.0154017026757343_6.59266335205902_0.305553978333135 chr18 67882044 67882906 + 0.305553978333135 NA intron (NM_027556, intron 45 of 45) L1Md_F2|LINE|L1 -50782 NM_172631 52662 Mm.440183 NM_172631 ENSMUSG00000024544 Ldlrad4 8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik low density lipoprotein receptor class A domain containing 4 protein-coding common_peak1_18_95_0.0154017026757343_6.59266335205902_0.305553978333135 chr11 11765452 11765846 + 0.305553978333135 NA intron (NM_001301866, intron 5 of 5) intron (NM_001301866, intron 5 of 5) 43313 NM_021891 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding common_peak1_18_95_0.0154017026757343_6.59266335205902_0.305553978333135-2 chr11 78596287 78596704 + 0.305553978333135 NA intron (NM_008702, intron 3 of 10) intron (NM_008702, intron 3 of 10) -45760 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e transmembrane protein 97 protein-coding common_peak1_18_95_0.0154017026757343_6.59266335205902_0.305553978333135-3 chr16 24221098 24221553 + 0.305553978333135 NA Intergenic Intergenic -172025 NM_178665 210126 Mm.209385 NM_178665 ENSMUSG00000033306 Lpp 9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16 LIM domain containing preferred translocation partner in lipoma protein-coding common_peak2_145_1177_0.00680751374152599_10.2055275807012_0.305536658261716 chr16 50430484 50433037 + 0.305536658261716 NA intron (NM_027444, intron 1 of 16) CpG 629 NM_027444 70508 Mm.28940 NM_027444 ENSMUSG00000022641 Bbx 5530401J07Rik|5730403O13Rik bobby sox HMG box containing protein-coding common_peak2_219_1948_0.00599726550073854_10.9315170080083_0.305534206184473 chr2 150568879 150572527 + 0.305534206184473 NA intron (NM_009977, intron 1 of 3) intron (NM_009977, intron 1 of 3) 288 NM_009977 13011 Mm.12965 NM_009977 ENSMUSG00000068129 Cst7 Cmap cystatin F (leukocystatin) protein-coding common_peak1_180_1549_-0.00884518468523865_10.593629907819_0.30552754871935 chr1 74396439 74398369 + 0.30552754871935 NA TTS (NM_153088) TTS (NM_153088) 3094 NR_029743 387219 NR_029743 ENSMUSG00000065468 Mir26b Mirn26b|mir-26b|mmu-mir-26b microRNA 26b ncRNA common_peak1_219_1966_-0.00726560151990263_10.9381484415186_0.305513539368065 chr2 30657568 30659291 + 0.305513539368065 NA Intergenic CpG -62781 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak1_36_217_0.0115993264344842_7.77398398799417_0.3055021707657 chr8 45999774 46000399 + 0.3055021707657 NA promoter-TSS (NM_001039562) promoter-TSS (NM_001039562) -236 NM_001039562 654824 Mm.334517 NM_001039562 ENSMUSG00000050914 Ankrd37 - ankyrin repeat domain 37 protein-coding common_peak2_181_1559_-0.00837295984320718_10.603143833828_0.305498625485935 chr6 129914111 129918943 + 0.305498625485935 NA Intergenic Intergenic -3303 NM_008463 16636 Mm.14111 NM_008463 ENSMUSG00000030173 Klra5 Ly49e killer cell lectin-like receptor, subfamily A, member 5 protein-coding common_peak2_113_880_-0.0118871781838834_9.77705461982847_0.305486846245125 chr5 114783005 114785669 + 0.305486846245125 NA intron (NM_026718, intron 1 of 14) B1_Mur1|SINE|Alu 9197 NM_026718 68420 Mm.275554 NM_026718 ENSMUSG00000041870 Ankrd13a 1100001D10Rik|ANKRD13|AU046136 ankyrin repeat domain 13a protein-coding common_peak2_114_877_0.00848926143647155_9.78232176025359_0.30547165237814 chr7 100120443 100122276 + 0.30547165237814 NA intron (NM_133692, intron 1 of 11) CpG 141 NM_133692 67967 Mm.37562 NM_133692 ENSMUSG00000030726 Pold3 2410142G14Rik|C85233|P66|P68 polymerase (DNA-directed), delta 3, accessory subunit protein-coding unique_peak2_18_99_-0.043491986377834_6.62211019658581_0.305461648918211 chr15 67145543 67146328 + 0.305461648918211 NA intron (NM_009177, intron 2 of 8) intron (NM_009177, intron 2 of 8) 30947 NM_009177 20442 Mm.248334 NM_009177 ENSMUSG00000013846 St3gal1 5330418N22Rik|AI467004|ST3GalI|Siat4|Siat4a|St3gal-1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding common_peak1_18_99_-0.043491986377834_6.62211019658581_0.305461648918211-2 chr17 12745393 12745849 + 0.305461648918211 NA intron (NR_027773, intron 1 of 2) intron (NR_027773, intron 1 of 2) 4310 NR_027784 104103 Mm.26553 NR_002853 ENSMUSG00000078247 Airn 2810051F02Rik|2810434M15Rik|AI256653|AI597500|AW049873|Air|B930018I07Rik|D17Ertd663e|IGF2RAS antisense Igf2r RNA ncRNA common_peak1_18_99_-0.043491986377834_6.62211019658581_0.305461648918211 chr15 75684583 75685104 + 0.305461648918211 NA Intergenic MTC|LTR|ERVL-MaLR -6053 NM_028404 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding common_peak1_84_615_-0.0151446928424104_9.2592141942737_0.305461584315381 chr11 74770361 74771766 + 0.305461584315381 NA intron (NM_026197, intron 1 of 9) CpG 200 NM_026197 67493 Mm.45748 NM_026197 ENSMUSG00000010554 Mettl16 2610100D03Rik|2810013M15Rik|A830095F14Rik|AI846133|Mett10d methyltransferase like 16 protein-coding common_peak2_264_2449_0.0052813184315017_11.2612066931057_0.305454351640064 chr10 67535931 67539341 + 0.305454351640064 NA promoter-TSS (NM_010118) promoter-TSS (NM_010118) -233 NM_010118 13654 Mm.290421 NM_010118 ENSMUSG00000037868 Egr2 Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6 early growth response 2 protein-coding common_peak2_59_402_-0.0193672847439075_8.64495238615601_0.305372958578645-2 chr9 56529728 56531750 + 0.305372958578645 NA Intergenic Intergenic 104909 NM_001311076 235402 Mm.246605 NM_181074 ENSMUSG00000049556 Lingo1 4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding common_peak2_59_402_-0.0193672847439075_8.64495238615601_0.305372958578645 chr8 18594626 18596042 + 0.305372958578645 NA 5' UTR (NM_173189, exon 1 of 14) 5' UTR (NM_173189, exon 1 of 14) 161 NM_173189 244329 Mm.235296 NM_173189 ENSMUSG00000039842 Mcph1 5430437K10Rik|BRIT1|D030046N04Rik|MCT microcephaly, primary autosomal recessive 1 protein-coding common_peak1_37_224_0.013195323366209_7.82037885290014_0.305363342850652 chr16 13754311 13755095 + 0.305363342850652 NA Intergenic CpG -24219 NM_011987 26565 Mm.4214 NM_011987 ENSMUSG00000022683 Pla2g10 GX sPLA2|PLA2GX|sPLA2-X phospholipase A2, group X protein-coding common_peak2_37_224_0.013195323366209_7.82037885290014_0.305363342850652 chr13 54574628 54575678 + 0.305363342850652 NA exon (NM_019968, exon 1 of 4) exon (NM_019968, exon 1 of 4) 140 NM_019968 56795 Mm.89484 NM_019968 ENSMUSG00000025870 Arl10 Arl10a|Arm1 ADP-ribosylation factor-like 10 protein-coding common_peak2_37_224_0.013195323366209_7.82037885290014_0.305363342850652-2 chr13 117195610 117196491 + 0.305363342850652 NA Intergenic Intergenic -24523 NM_010330 13723 Mm.274926 NM_010330 ENSMUSG00000021728 Emb AL022799|Gp70 embigin protein-coding common_peak2_150_1226_0.00760085132264621_10.2647199593242_0.305357051043273 chr11 84178699 84180926 + 0.305357051043273 NA Intergenic CpG -12336 NM_001037932 628813 Mm.390389 NM_001037932 ENSMUSG00000051452 Gm11437 AI463690|OTTMUSG00000000997 predicted gene 11437 protein-coding common_peak1_60_402_0.00988342251900498_8.65957773978747_0.305329958592903-2 chr14 107075046 107075478 + 0.305329958592903 NA Intergenic (TCCTG)n|Simple_repeat|Simple_repeat -588742 NR_045938 73631 Mm.48862 NR_045938 ENSMUSG00000099794 1700128A07Rik - RIKEN cDNA 1700128A07 gene ncRNA common_peak1_60_402_0.00988342251900498_8.65957773978747_0.305329958592903 chr14 100283068 100284165 + 0.305329958592903 NA Intergenic Intergenic -133820 NM_010636 16597 Mm.396499 NM_010636 ENSMUSG00000072294 Klf12 2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik Kruppel-like factor 12 protein-coding common_peak2_60_402_0.00988342251900498_8.65957773978747_0.305329958592903 chr5 96948399 96950149 + 0.305329958592903 NA Intergenic URR1A|DNA|hAT-Charlie 28002 NR_131152 666266 Mm.32442 NR_131152 ENSMUSG00000106357 Gm8013 EG666266 predicted gene 8013 ncRNA common_peak2_117_906_0.00717997569965867_9.82854872837835_0.305329948835156 chr15 37960108 37961612 + 0.305329948835156 NA exon (NM_199476, exon 1 of 9) exon (NM_199476, exon 1 of 9) 195 NM_199476 382985 Mm.24738 NM_199476 ENSMUSG00000022292 Rrm2b p53R2 ribonucleotide reductase M2 B (TP53 inducible) protein-coding common_peak1_117_906_0.00717997569965867_9.82854872837835_0.305329948835156 chr3 142394847 142395714 + 0.305329948835156 NA intron (NM_019808, intron 1 of 12) CpG 416 NM_001190853 56376 Mm.117709 NM_019808 ENSMUSG00000028273 Pdlim5 1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM PDZ and LIM domain 5 protein-coding common_peak2_37_230_-0.0247725268328107_7.83936277799965_0.305306449067075 chr5 35105137 35105808 + 0.305306449067075 NA intron (NM_013587, intron 1 of 7) CpG 225 NM_013587 16976 Mm.277661 NM_013587 ENSMUSG00000029103 Lrpap1 AA617339|AI790446|AU042172|C77774|HBP44|RAP low density lipoprotein receptor-related protein associated protein 1 protein-coding unique_peak2_37_230_-0.0247725268328107_7.83936277799965_0.305306449067075 chr3 146757667 146759200 + 0.305306449067075 NA intron (NM_011100, intron 1 of 9) intron (NM_011100, intron 1 of 9) 11805 NM_001164198 18749 Mm.16766 NM_011100 ENSMUSG00000005034 Prkacb CbPKA|Pkacb protein kinase, cAMP dependent, catalytic, beta protein-coding common_peak2_37_230_-0.0247725268328107_7.83936277799965_0.305306449067075-2 chr9 41142816 41144645 + 0.305306449067075 NA intron (NM_176860, intron 1 of 13) B1F|SINE|Alu 13764 NM_176860 72828 Mm.133615 NM_176860 ENSMUSG00000032020 Ubash3b 2810457I06Rik|BB125008|TULA-2|p70 ubiquitin associated and SH3 domain containing, B protein-coding common_peak1_37_230_-0.0247725268328107_7.83936277799965_0.305306449067075 chr9 36726449 36727145 + 0.305306449067075 NA promoter-TSS (NM_007691) promoter-TSS (NM_007691) -139 NM_007691 12649 Mm.16753 NM_007691 ENSMUSG00000032113 Chek1 C85740|Chk1|rad27 checkpoint kinase 1 protein-coding common_peak2_117_918_-0.0117823350608539_9.83802988375861_0.305301752319709 chr3 153911787 153913945 + 0.305301752319709 NA promoter-TSS (NR_028096) promoter-TSS (NR_028096) 100 NM_001163478 19352 Mm.277831 NM_011231 ENSMUSG00000038975 Rabggtb - Rab geranylgeranyl transferase, b subunit protein-coding unique_peak2_19_101_0.0187088856592812_6.68177978480114_0.305287852912469 chr14 55882076 55882989 + 0.305287852912469 NA 3' UTR (NM_019820, exon 3 of 3) 3' UTR (NM_019820, exon 3 of 3) 1724 NM_019820 56410 Mm.97163 NM_019820 ENSMUSG00000040380 Cbln3 - cerebellin 3 precursor protein protein-coding unique_peak2_19_101_0.0187088856592812_6.68177978480114_0.305287852912469-2 chr2 180034130 180035106 + 0.305287852912469 NA 3' UTR (NM_177727, exon 9 of 9) 3' UTR (NM_177727, exon 9 of 9) 7846 NM_001289476 26444 Mm.21728 NM_011969 ENSMUSG00000027566 Psma7 C6-I proteasome (prosome, macropain) subunit, alpha type 7 protein-coding common_peak1_19_101_0.0187088856592812_6.68177978480114_0.305287852912469 chr18 24057078 24057576 + 0.305287852912469 NA Intergenic Intergenic -36556 NM_021559 59057 Mm.417427 NM_021559 ENSMUSG00000051469 Zfp24 3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Zfp191|Znf191|Znf24|Znp191 zinc finger protein 24 protein-coding common_peak2_229_2076_-0.00710679868646302_11.0167321015014_0.305275455558774 chr2 144164758 144169116 + 0.305275455558774 NA Intergenic (TTATA)n|Simple_repeat|Simple_repeat 22353 NM_001033778 common_peak2_189_1643_-0.00791248222011554_10.6790383425716_0.305269604332982 chr8 8688871 8691012 + 0.305269604332982 NA TTS (NR_106114) TTS (NR_106114) 221 NR_106114 102465762 NR_106114 ENSMUSG00000098917 Mir7654 Gm27748|mmu-mir-7654 microRNA 7654 ncRNA common_peak2_38_231_0.0149624544802887_7.86546222236772_0.305232874645569-2 chr14 30950737 30951890 + 0.305232874645569 NA promoter-TSS (NM_011849) promoter-TSS (NM_011849) -64 NM_001308328 23955 Mm.251494 NM_011849 ENSMUSG00000021918 Nek4 Stk2 NIMA (never in mitosis gene a)-related expressed kinase 4 protein-coding common_peak2_38_231_0.0149624544802887_7.86546222236772_0.305232874645569 chr11 58306904 58308004 + 0.305232874645569 NA intron (NM_001040686, intron 1 of 11) CpG 385 NM_001040686 103836 Mm.41440 NM_182996 ENSMUSG00000037243 Zfp692 AI746306|AI839920|Zfp692-ps|Znf692 zinc finger protein 692 protein-coding common_peak1_38_231_0.0149624544802887_7.86546222236772_0.305232874645569 chr4 59232449 59233300 + 0.305232874645569 NA Intergenic B1_Mur2|SINE|Alu -27177 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak1_119_937_-0.0115630575449597_9.8676625837429_0.305214853327374 chr11 96064683 96065713 + 0.305214853327374 NA exon (NM_172300, exon 1 of 7) exon (NM_172300, exon 1 of 7) 166 NM_172300 268470 Mm.38802 NM_172300 ENSMUSG00000014349 Ube2z AW049199|C030047H17Rik|D11Moh35 ubiquitin-conjugating enzyme E2Z protein-coding unique_peak2_19_105_-0.0367862269324224_6.70952734109699_0.305205968493909-2 chrX 48341557 48342471 + 0.305205968493909 NA intron (NM_178782, intron 1 of 14) CpG 656 NM_178782 320376 Mm.210146 NM_178782 ENSMUSG00000036959 Bcorl1 6720425J07Rik|B930011H20Rik BCL6 co-repressor-like 1 protein-coding common_peak1_19_105_-0.0367862269324224_6.70952734109699_0.305205968493909-2 chr18 35913477 35913973 + 0.305205968493909 NA Intergenic Intergenic -51105 NM_028707 74002 Mm.196944 NM_028707 ENSMUSG00000024347 Psd2 6330404E20Rik|AW125584|EFA6C pleckstrin and Sec7 domain containing 2 protein-coding unique_peak2_19_105_-0.0367862269324224_6.70952734109699_0.305205968493909 chr14 31089752 31090566 + 0.305205968493909 NA intron (NM_001081251, intron 25 of 32) intron (NM_001081251, intron 25 of 32) 38771 NM_001308466 66487 Mm.379116 NM_001308091 ENSMUSG00000058351 Smim4 2010107H07Rik|Gm41122 small integral membrane protein 4 protein-coding common_peak1_19_105_-0.0367862269324224_6.70952734109699_0.305205968493909 chr13 56522504 56523035 + 0.305205968493909 NA intron (NM_178674, intron 1 of 6) CpG 261 NM_178674 213311 Mm.233904 NM_178674 ENSMUSG00000035509 Fbxl21 D630045D17Rik|FBL3B|FBXL3B|Psttm F-box and leucine-rich repeat protein 21 protein-coding common_peak1_61_418_-0.0175119177786893_8.70205047481001_0.305205920230779 chr14 52014553 52015679 + 0.305205920230779 NA promoter-TSS (NM_001253695) promoter-TSS (NM_001253695) -558 NM_001253695 69890 Mm.475652 NM_027248 ENSMUSG00000049295 Zfp219 2010302A17Rik zinc finger protein 219 protein-coding common_peak2_235_2124_0.005503901502113_11.0559990766635_0.305161764424021 chr19 45782058 45784659 + 0.305161764424021 NA promoter-TSS (NM_023799) promoter-TSS (NM_023799) -67 NM_023799 76055 Mm.122725 NM_023799 ENSMUSG00000025220 Mgea5 2810009A20Rik|4833427O07Rik|5830447M11Rik|AA408215|Hy5|Ncoat|OGA|mKIAA0679 meningioma expressed antigen 5 (hyaluronidase) protein-coding common_peak1_121_944_0.0069612431248931_9.88765114067088_0.305157405246764 chr16 33056009 33057360 + 0.305157405246764 NA promoter-TSS (NM_178378) promoter-TSS (NM_178378) 170 NM_021338 57808 Mm.19355 NM_021338 ENSMUSG00000060636 Rpl35a 2810431L15Rik|Rpl35 ribosomal protein L35A protein-coding common_peak1_62_426_-0.016483099668708_8.72985070978614_0.305127128611318 chr11 60130273 60131295 + 0.305127128611318 NA intron (NM_009021, intron 1 of 5) L3|LINE|CR1 -9298 NM_001037764 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak1_196_1701_0.00609129493933658_10.7360609691556_0.305105490141294 chr10 59949975 59952864 + 0.305105490141294 NA exon (NM_029083, exon 2 of 3) exon (NM_029083, exon 2 of 3) 351 NM_029083 74747 Mm.21697 NM_029083 ENSMUSG00000020108 Ddit4 5830413E08Rik|AA415483|REDD1|Rtp801|dig2 DNA-damage-inducible transcript 4 protein-coding common_peak1_39_239_0.0108559432086137_7.91231856721283_0.305093068095113-2 chr2 152791169 152792042 + 0.305093068095113 NA intron (NM_009743, intron 2 of 2) B1F2|SINE|Alu 37432 NM_053091 84682 Mm.196668 NM_053091 ENSMUSG00000009876 Cox4i2 Cox4b|CoxIV-2 cytochrome c oxidase subunit IV isoform 2 protein-coding common_peak1_39_239_0.0108559432086137_7.91231856721283_0.305093068095113 chr1 138177500 138178495 + 0.305093068095113 NA Intergenic Lx10|LINE|L1 -2692 NM_001268286 19264 Mm.391573 NM_011210 ENSMUSG00000026395 Ptprc B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc protein tyrosine phosphatase, receptor type, C protein-coding common_peak1_39_239_0.0108559432086137_7.91231856721283_0.305093068095113-3 chr7 132794015 132794620 + 0.305093068095113 NA intron (NM_212473, intron 1 of 4) intron (NM_212473, intron 1 of 4) -7382 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_63_426_0.0113856258773897_8.74378507255918_0.305088837368966 chr9 118396070 118397172 + 0.305088837368966 NA Intergenic Intergenic -33218 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak2_63_426_0.0113856258773897_8.74378507255918_0.305088837368966 chr7 132858785 132859907 + 0.305088837368966 NA intron (NM_198017, intron 1 of 8) CpG 121 NM_198017 109359 Mm.274824 NM_198017 ENSMUSG00000030965 Fam175b AA589499|AI853413|Abro1|C430003P19Rik family with sequence similarity 175, member B protein-coding common_peak1_91_667_0.00798113399217115_9.38769485947014_0.305084285163283 chr11 117986330 117987525 + 0.305084285163283 NA promoter-TSS (NM_133757) promoter-TSS (NM_133757) 70 NM_133757 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak1_382_3875_-0.00474255848666161_11.9179815761717_0.30507099013414 chr18 36559172 36561654 + 0.30507099013414 NA promoter-TSS (NM_175375) promoter-TSS (NM_175375) -190 NM_175375 108857 Mm.482287 NM_175375 ENSMUSG00000024483 Ankhd1 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085 ankyrin repeat and KH domain containing 1 protein-coding common_peak2_159_1317_0.00683650618179321_10.3675529080989_0.305058858694302 chr18 46197797 46199892 + 0.305058858694302 NA promoter-TSS (NM_001170855) promoter-TSS (NM_001170855) -26 NM_001170855 28105 Mm.277382 NM_178872 ENSMUSG00000033949 Trim36 D18Wsu100e|haprin tripartite motif-containing 36 protein-coding common_peak1_63_434_-0.0153937052382105_8.75717473811699_0.305051255231946 chr1 91080581 91081368 + 0.305051255231946 NA intron (NM_008515, intron 6 of 22) intron (NM_008515, intron 6 of 22) 27530 NM_008515 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak2_123_975_-0.0108305104558681_9.92532208233495_0.305051247251104 chr2 118489704 118492399 + 0.305051247251104 NA Intergenic Intergenic -11355 NM_009273 20813 Mm.363404 NM_009273 ENSMUSG00000009549 Srp14 14kDa|AW536328 signal recognition particle 14 protein-coding common_peak1_20_108_0.00929031902157185_6.77282948428771_0.305014404603377-5 chr3 90615241 90615595 + 0.305014404603377 NA Intergenic Intergenic 2524 NM_011313 20200 Mm.100144 NM_011313 ENSMUSG00000001025 S100a6 2A9|5B10|CALCYCLIN|Cacy|PRA S100 calcium binding protein A6 (calcyclin) protein-coding common_peak1_20_108_0.00929031902157185_6.77282948428771_0.305014404603377 chr11 120766831 120767467 + 0.305014404603377 NA Intergenic Intergenic 17055 NM_009053 19719 Mm.871 NM_009053 ENSMUSG00000025158 Rfng - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding common_peak1_20_108_0.00929031902157185_6.77282948428771_0.305014404603377-4 chr19 34846653 34847142 + 0.305014404603377 NA intron (NM_001114339, intron 1 of 6) LTR72_RN|LTR|ERV1 -26124 NR_029783 723826 NR_029783 ENSMUSG00000065594 Mir107 Mirn107|mir-107|mmu-mir-107 microRNA 107 ncRNA common_peak1_20_108_0.00929031902157185_6.77282948428771_0.305014404603377-3 chr17 31071004 31071539 + 0.305014404603377 NA intron (NM_009593, intron 2 of 14) intron (NM_009593, intron 2 of 14) 13577 NM_009593 11307 Mm.15691 NM_009593 ENSMUSG00000024030 Abcg1 AW413978|Abc8|White ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding common_peak1_20_108_0.00929031902157185_6.77282948428771_0.305014404603377-6 chr6 145894267 145894709 + 0.305014404603377 NA Intergenic Intergenic -29068 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak1_20_108_0.00929031902157185_6.77282948428771_0.305014404603377-2 chr12 85218861 85219363 + 0.305014404603377 NA promoter-TSS (NM_145445) promoter-TSS (NM_145445) -369 NM_145445 217715 Mm.29041 NM_145445 ENSMUSG00000004788 Eif2b2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B, subunit 2 beta protein-coding unique_peak2_20_108_0.00929031902157185_6.77282948428771_0.305014404603377 chr3 60508064 60509038 + 0.305014404603377 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 7372 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_160_1341_-0.00817204284120443_10.3860829347796_0.305007650599638 chr2 157203696 157205334 + 0.305007650599638 NA promoter-TSS (NM_001139516) promoter-TSS (NM_001139516) 19 NM_011249 19650 Mm.244671 NM_011249 ENSMUSG00000027641 Rbl1 AW547426|PRB1|p107 retinoblastoma-like 1 (p107) protein-coding common_peak2_200_1744_0.00566689520599084_10.7718447687_0.305005234665821 chr15 79686978 79688891 + 0.305005234665821 NA promoter-TSS (NM_028792) promoter-TSS (NM_028792) -62 NM_028792 74158 Mm.323393 NM_028792 ENSMUSG00000022426 Josd1 1300006C06Rik|mKIAA0063 Josephin domain containing 1 protein-coding common_peak2_92_686_-0.0133495679305096_9.41749150485284_0.30500124155164 chr9 108109105 108111700 + 0.30500124155164 NA exon (NM_007567, exon 5 of 12) exon (NM_007567, exon 5 of 12) -15922 NM_146226 235606 Mm.219639 NM_146226 ENSMUSG00000032590 Apeh - acylpeptide hydrolase protein-coding common_peak1_92_686_-0.0133495679305096_9.41749150485284_0.30500124155164 chr6 72344683 72345798 + 0.30500124155164 NA promoter-TSS (NM_138592) promoter-TSS (NM_138592) -65 NM_138592 28035 Mm.281900 NM_138592 ENSMUSG00000056305 Usp39 AA408960|AI894154|CGI-21|D6Wsu157e|SAD1 ubiquitin specific peptidase 39 protein-coding common_peak1_161_1352_-0.00899172979730167_10.3974502590779_0.304975203953097 chr11 94321249 94322729 + 0.304975203953097 NA promoter-TSS (NM_026313) promoter-TSS (NM_026313) -78 NM_026313 67684 Mm.30927 NM_026313 ENSMUSG00000020863 Luc7l3 3300001P08Rik|Luc7a LUC7-like 3 (S. cerevisiae) protein-coding common_peak2_20_112_-0.04270431861669_6.79882680310684_0.304942611491146 chr13 93072977 93074005 + 0.304942611491146 NA non-coding (NR_036451, exon 1 of 3) non-coding (NR_036451, exon 1 of 3) 187 NR_036451 100502942 Mm.441946 NM_177623 Gm4814 C920025J10|EG218444 predicted gene 4814 ncRNA unique_peak2_20_112_-0.04270431861669_6.79882680310684_0.304942611491146-2 chrX 50564549 50565343 + 0.304942611491146 NA non-coding (NR_015505, exon 20 of 20) non-coding (NR_015505, exon 20 of 20) 27557 NR_131207 102639259 Mm.350898 NR_131207 Gm35612 - predicted gene, 35612 ncRNA unique_peak2_20_112_-0.04270431861669_6.79882680310684_0.304942611491146 chr5 140790934 140791674 + 0.304942611491146 NA intron (NM_010302, intron 1 of 3) intron (NM_010302, intron 1 of 3) 39127 NM_010302 14673 Mm.370185 NM_010302 ENSMUSG00000000149 Gna12 AI414047|AI504261|Galpha12 guanine nucleotide binding protein, alpha 12 protein-coding common_peak1_20_112_-0.04270431861669_6.79882680310684_0.304942611491146 chr11 58307068 58307463 + 0.304942611491146 NA intron (NM_001040686, intron 1 of 11) CpG 196 NM_001040686 103836 Mm.41440 NM_182996 ENSMUSG00000037243 Zfp692 AI746306|AI839920|Zfp692-ps|Znf692 zinc finger protein 692 protein-coding common_peak2_65_443_0.00951639249713132_8.79917406259867_0.304933779430112 chr18 75018417 75019415 + 0.304933779430112 NA 5' UTR (NM_027727, exon 1 of 17) 5' UTR (NM_027727, exon 1 of 17) 144 NM_027727 69190 Mm.173826 NM_027727 ENSMUSG00000035765 Dym 1810041M12Rik|4933427L07Rik|C030019K18Rik dymeclin protein-coding common_peak1_40_252_-0.0215503096288847_7.97221841987987_0.304930867616017 chr1 21385475 21386392 + 0.304930867616017 NA 3' UTR (NM_001113187, exon 3 of 3) 3' UTR (NM_001113187, exon 3 of 3) 2377 NM_001113187 98582 Mm.326336 NM_001113187 ENSMUSG00000085079 Khdc1b AU014713|AU015226|AU024076|AY238603|C85331|C86372|C88118|Khdc1|Khdc1c KH domain containing 1B protein-coding common_peak2_40_252_-0.0215503096288847_7.97221841987987_0.304930867616017 chr11 29130036 29131352 + 0.304930867616017 NA promoter-TSS (NM_027869) promoter-TSS (NM_027869) -57 NM_027869 71701 Mm.211131 NM_027869 ENSMUSG00000020464 Pnpt1 1200003F12Rik|Old35|PNPase|Pnptl1 polyribonucleotide nucleotidyltransferase 1 protein-coding common_peak2_40_252_-0.0215503096288847_7.97221841987987_0.304930867616017-2 chr15 55828395 55829689 + 0.304930867616017 NA intron (NM_016667, intron 1 of 6) intron (NM_016667, intron 1 of 6) 77907 NM_016667 20649 Mm.309425 NM_016667 ENSMUSG00000060429 Sntb1 - syntrophin, basic 1 protein-coding common_peak1_246_2265_-0.00656302734879155_11.1426506321461_0.304920492929709 chr1 133689245 133691866 + 0.304920492929709 NA promoter-TSS (NM_001159649) promoter-TSS (NM_001159649) -447 NM_001159649 240754 Mm.36534 NM_172842 ENSMUSG00000051998 Lax1 A530029E09|E430019B13Rik lymphocyte transmembrane adaptor 1 protein-coding common_peak2_65_451_-0.0162467035679512_8.81205561063121_0.304899001615675-2 chr13 37869420 37871585 + 0.304899001615675 NA intron (NM_001039188, intron 1 of 9) intron (NM_001039188, intron 1 of 9) -17932 NR_033218 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_65_451_-0.0162467035679512_8.81205561063121_0.304899001615675 chr1 39922141 39924104 + 0.304899001615675 NA intron (NM_001252200, intron 2 of 31) intron (NM_001252200, intron 2 of 31) 22209 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding common_peak2_66_451_0.0103647377345357_8.82536133128245_0.304864837984653 chr3 89266325 89267267 + 0.304864837984653 NA exon (NM_026767, exon 2 of 2) exon (NM_026767, exon 2 of 2) 335 NM_026767 68563 Mm.272927 NM_026767 ENSMUSG00000042737 Dpm3 1110001H19Rik|AV117483 dolichyl-phosphate mannosyltransferase polypeptide 3 protein-coding common_peak2_41_254_0.00973351812599699_7.99922019592186_0.304854528727109 chr16 11322349 11323670 + 0.304854528727109 NA intron (NM_028964, intron 1 of 20) intron (NM_028964, intron 1 of 20) 105 NM_028964 74478 Mm.325831 NM_028964 ENSMUSG00000071669 Snx29 4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a sorting nexin 29 protein-coding common_peak1_41_254_0.00973351812599699_7.99922019592186_0.304854528727109 chr10 22298650 22299425 + 0.304854528727109 NA intron (NM_009018, intron 5 of 5) intron (NM_009018, intron 5 of 5) -7683 NR_015465 606736 Mm.387042 NR_015465 ENSMUSG00000097352 C920009B18Rik - RIKEN cDNA C920009B18 gene ncRNA common_peak1_41_254_0.00973351812599699_7.99922019592186_0.304854528727109-2 chr8 126588464 126589140 + 0.304854528727109 NA 3' UTR (NM_001164598, exon 2 of 2) 3' UTR (NM_001164598, exon 2 of 2) 4634 NM_001164598 270110 Mm.334918 NM_001164598 ENSMUSG00000051495 Irf2bp2 E130305N23Rik|IRF-2BP2 interferon regulatory factor 2 binding protein 2 protein-coding common_peak2_129_1021_0.00634735058163116_10.0003531562284_0.304847042469428 chr14 65357059 65359761 + 0.304847042469428 NA promoter-TSS (NM_199029) promoter-TSS (NM_199029) -266 NM_199029 380912 Mm.270087 NM_199029 ENSMUSG00000034522 Zfp395 BC053701|Gm910 zinc finger protein 395 protein-coding common_peak2_21_114_0.0143076917495764_6.85264389681916_0.304806517013645-3 chr8 117500551 117501260 + 0.304806517013645 NA intron (NM_172285, intron 1 of 32) intron (NM_172285, intron 1 of 32) 2614 NM_172285 234779 Mm.192699 NM_172285 ENSMUSG00000034330 Plcg2 PLC-gamma-2|PLCgamma2|Plcg-2 phospholipase C, gamma 2 protein-coding common_peak2_21_114_0.0143076917495764_6.85264389681916_0.304806517013645 chr10 66852600 66853409 + 0.304806517013645 NA Intergenic Intergenic -152071 NR_110511 102634101 Mm.445258 NR_110511 Gm31763 - predicted gene, 31763 ncRNA common_peak1_21_114_0.0143076917495764_6.85264389681916_0.304806517013645 chr7 75482875 75483224 + 0.304806517013645 NA intron (NM_029332, intron 1 of 36) ORR1A2|LTR|ERVL-MaLR 27515 NM_029332 75547 Mm.216107 NM_029332 ENSMUSG00000066406 Akap13 1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC A kinase (PRKA) anchor protein 13 protein-coding common_peak2_21_114_0.0143076917495764_6.85264389681916_0.304806517013645-2 chr11 107442017 107442893 + 0.304806517013645 NA intron (NM_145823, intron 1 of 9) ORR1D2|LTR|ERVL-MaLR 28265 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding unique_peak2_21_114_0.0143076917495764_6.85264389681916_0.304806517013645-2 chr17 27323171 27323935 + 0.304806517013645 NA Intergenic Intergenic -4832 NR_106075 102466818 NR_106075 ENSMUSG00000099237 Mir7216 Gm27555|mmu-mir-7216 microRNA 7216 ncRNA unique_peak2_21_114_0.0143076917495764_6.85264389681916_0.304806517013645 chr1 52643821 52644878 + 0.304806517013645 NA intron (NR_024590, intron 6 of 8) Lx2B2|LINE|L1 13644 NM_001142647 227094 Mm.83541 NM_172654 ENSMUSG00000043015 Nemp2 5330401P04Rik|9830163O08|Tmem194b nuclear envelope integral membrane protein 2 protein-coding common_peak2_96_722_-0.0125134735877079_9.49159510015726_0.304802540450137 chr5 122949407 122952925 + 0.304802540450137 NA intron (NM_001003953, intron 6 of 22) intron (NM_001003953, intron 6 of 22) 37933 NM_001003953 30841 Mm.86406 NM_013910 ENSMUSG00000029475 Kdm2b Cxxc2|Fbl10|Fbxl10|Jhdm1b|PCCX2 lysine (K)-specific demethylase 2B protein-coding common_peak1_168_1423_-0.00791958243698865_10.4717736397479_0.304777873644921 chr13 119789834 119791631 + 0.304777873644921 NA promoter-TSS (NM_028245) promoter-TSS (NM_028245) 0 NM_001302548 72465 Mm.139115 NM_028245 ENSMUSG00000094870 Zfp131 2610109I01Rik|AW558871|Znf131 zinc finger protein 131 protein-coding common_peak1_67_468_-0.0166832291684926_8.86510249793113_0.30475785673874 chr17 78361972 78363140 + 0.30475785673874 NA intron (NM_015800, intron 13 of 16) intron (NM_015800, intron 13 of 16) 55596 NM_001285949 225020 Mm.236835 NM_199448 ENSMUSG00000056121 Fez2 9030616F16|D17Ertd315e fasciculation and elongation protein zeta 2 (zygin II) protein-coding common_peak1_97_731_-0.0122112901870022_9.50959419319054_0.304755933672895 chr1 37889768 37891063 + 0.304755933672895 NA promoter-TSS (NM_027098) promoter-TSS (NM_027098) -4 NM_026913 69028 Mm.63984 NM_026913 ENSMUSG00000026088 Mitd1 1500032H18Rik MIT, microtubule interacting and transport, domain containing 1 protein-coding common_peak1_42_261_0.0123041687165006_8.0395750858957_0.304752540053469 chr1 127232203 127233157 + 0.304752540053469 NA intron (NM_145128, intron 1 of 17) C-rich|Low_complexity|Low_complexity 27694 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding common_peak1_42_261_0.0123041687165006_8.0395750858957_0.304752540053469-2 chr2 118745790 118746731 + 0.304752540053469 NA exon (NM_001301269, exon 1 of 1) exon (NM_001301269, exon 1 of 1) 502 NM_001301269 100043272 Mm.398072 NM_001301269 ENSMUSG00000074918 Inafm2 5430417L22Rik|ENSMUSG00000074918 InaF motif containing 2 protein-coding unique_peak2_42_261_0.0123041687165006_8.0395750858957_0.304752540053469 chr19 14585545 14586905 + 0.304752540053469 NA intron (NM_001302947, intron 4 of 19) intron (NM_001302947, intron 4 of 19) 10988 NM_001302951 21888 Mm.103638 NM_011600 ENSMUSG00000024642 Tle4 5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4 transducin-like enhancer of split 4 protein-coding common_peak1_21_118_-0.0350200206139926_6.87730775300095_0.304741959507459-3 chr4 46573511 46573934 + 0.304741959507459 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) -7282 NM_178893 107684 Mm.416311 NM_178893 ENSMUSG00000028337 Coro2a 9030208C03Rik|AI563590|IR10 coronin, actin binding protein 2A protein-coding unique_peak2_21_118_-0.0350200206139926_6.87730775300095_0.304741959507459-5 chrX 42426541 42427594 + 0.304741959507459 NA Intergenic Intergenic -75498 NM_011364 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak1_21_118_-0.0350200206139926_6.87730775300095_0.304741959507459-2 chr1 101902172 101902676 + 0.304741959507459 NA Intergenic IAPEY4_I-int|LTR|ERVK 746656 NR_037989 100504525 Mm.87065 NR_037989 ENSMUSG00000100684 Gm20268 - predicted gene, 20268 ncRNA common_peak1_21_118_-0.0350200206139926_6.87730775300095_0.304741959507459 chr1 21328297 21328938 + 0.304741959507459 NA Intergenic Intergenic -21060 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding unique_peak2_21_118_-0.0350200206139926_6.87730775300095_0.304741959507459-2 chr6 54842125 54843202 + 0.304741959507459 NA intron (NM_199143, intron 1 of 4) intron (NM_199143, intron 1 of 4) 25747 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding unique_peak2_21_118_-0.0350200206139926_6.87730775300095_0.304741959507459 chr5 125382549 125383563 + 0.304741959507459 NA Intergenic Intergenic 6961 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak1_21_118_-0.0350200206139926_6.87730775300095_0.304741959507459-5 chr6 29527491 29527951 + 0.304741959507459 NA intron (NM_001311083, intron 1 of 9) intron (NM_001311083, intron 1 of 9) 1096 NM_012057 27056 Mm.6479 NM_012057 ENSMUSG00000029771 Irf5 AW491843|mirf5 interferon regulatory factor 5 protein-coding unique_peak2_21_118_-0.0350200206139926_6.87730775300095_0.304741959507459-4 chrX 38473241 38474197 + 0.304741959507459 NA Intergenic Intergenic -17259 NM_001290485 16784 Mm.486 NM_010685 ENSMUSG00000016534 Lamp2 CD107b|LGP-B|Lamp II|Lamp-2|Lamp-2a|Lamp-2b|Lamp-2c|Mac3 lysosomal-associated membrane protein 2 protein-coding common_peak2_21_118_-0.0350200206139926_6.87730775300095_0.304741959507459 chrX 50583860 50584526 + 0.304741959507459 NA intron (NR_015505, intron 13 of 19) intron (NR_015505, intron 13 of 19) 46804 NR_131207 102639259 Mm.350898 NR_131207 Gm35612 - predicted gene, 35612 ncRNA common_peak1_21_118_-0.0350200206139926_6.87730775300095_0.304741959507459-4 chr6 3498338 3498816 + 0.304741959507459 NA intron (NM_024260, intron 1 of 27) intron (NM_024260, intron 1 of 27) 184 NM_001167750 73288 Mm.45539 NM_024260 ENSMUSG00000001376 Vps50 1700034M03Rik|8430415E05Rik|BLM|C87205|Ccdc132|mKIAA1861 VPS50 EARP/GARPII complex subunit protein-coding unique_peak2_21_118_-0.0350200206139926_6.87730775300095_0.304741959507459-3 chr6 83267948 83268847 + 0.304741959507459 NA intron (NM_001166067, intron 10 of 24) intron (NM_001166067, intron 10 of 24) 31022 NM_001166067 232156 Mm.333189 NM_001166067 ENSMUSG00000068323 Slc4a5 C330006M16|C330016K18Rik solute carrier family 4, sodium bicarbonate cotransporter, member 5 protein-coding common_peak2_134_1069_0.00691807242940534_10.0668541175032_0.304676129468836 chr2 168589005 168591903 + 0.304676129468836 NA promoter-TSS (NM_001136073) promoter-TSS (NM_001136073) -89 NM_001136073 18019 Mm.116802 NM_010899 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 protein-coding common_peak1_134_1069_0.00691807242940534_10.0668541175032_0.304676129468836 chr4 43577954 43579481 + 0.304676129468836 NA promoter-TSS (NM_172866) promoter-TSS (NM_172866) -18 NM_172866 242406 Mm.259311 NM_172866 ENSMUSG00000028468 Rgp1 1110029E03Rik|AI527196|F730001J03|mKIAA0258 RAB6A GEF compex partner 1 protein-coding common_peak1_99_749_-0.011506970874148_9.54499329994617_0.304666091559155 chr9 69124557 69126103 + 0.304666091559155 NA intron (NM_013646, intron 1 of 10) intron (NM_013646, intron 1 of 10) -164511 NM_001289916 19883 Mm.378450 NM_013646 ENSMUSG00000032238 Rora 9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26 RAR-related orphan receptor alpha protein-coding common_peak1_43_269_0.00959445682947546_8.08161282546557_0.304642445173528 chr8 125044380 125045232 + 0.304642445173528 NA Intergenic Intergenic -9389 NM_174853 244667 Mm.233504 NM_170596 ENSMUSG00000043051 Disc1 - disrupted in schizophrenia 1 protein-coding common_peak2_135_1079_0.00655759748240925_10.080094395792_0.304642431287509 chr2 174472096 174473986 + 0.304642431287509 NA promoter-TSS (NM_025531) promoter-TSS (NM_025531) -100 NM_025531 66390 Mm.182294 NM_025531 ENSMUSG00000016257 Slmo2 2310042G06Rik|AA407013|Prelid3b slowmo homolog 2 (Drosophila) protein-coding common_peak2_174_1471_0.00598934534484208_10.5265566287294_0.304638074605197 chr11 4235342 4238506 + 0.304638074605197 NA intron (NM_001013365, intron 1 of 2) intron (NM_001013365, intron 1 of 2) 139 NM_001013365 18413 Mm.131422 NM_001013365 ENSMUSG00000058755 Osm OncoM oncostatin M protein-coding common_peak1_262_2445_-0.00576766925192551_11.2533248539014_0.304633547495407 chr10 96350932 96352985 + 0.304633547495407 NA Intergenic MTE2b|LTR|ERVL-MaLR 125751 NR_110448 74881 Mm.410819 NR_110448 4930459C07Rik - RIKEN cDNA 4930459C07 gene ncRNA common_peak2_136_1089_0.00622513687057058_10.0932249880996_0.304609350291561 chr13 96669817 96671921 + 0.304609350291561 NA promoter-TSS (NM_008255) promoter-TSS (NM_008255) 67 NM_008255 15357 Mm.316652 NM_008255 ENSMUSG00000021670 Hmgcr HMG-CoAR|Red 3-hydroxy-3-methylglutaryl-Coenzyme A reductase protein-coding common_peak1_43_275_-0.022114402897861_8.09746725532924_0.304602820099494 chr16 93711900 93712534 + 0.304602820099494 NA intron (NM_026700, intron 1 of 3) CpG 310 NM_027293 70028 Mm.23230 NM_026700 ENSMUSG00000022946 Dopey2 0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933 dopey family member 2 protein-coding common_peak1_43_275_-0.022114402897861_8.09746725532924_0.304602820099494-2 chr2 27486645 27487442 + 0.304602820099494 NA Intergenic Intergenic -11370 NM_001113574 67382 Mm.28721 NM_023336 ENSMUSG00000026918 Brd3 2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3 bromodomain containing 3 protein-coding common_peak1_70_485_0.00834704224123684_8.9289860247264_0.304597106158187 chr16 49798491 49799741 + 0.304597106158187 NA Intergenic Intergenic -56538 NM_010581 16423 Mm.31752 NM_010581 ENSMUSG00000055447 Cd47 9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp CD47 antigen (Rh-related antigen, integrin-associated signal transducer) protein-coding common_peak2_22_121_0.00772346653062339_6.9345990708282_0.304589826361751 chr18 65188540 65189302 + 0.304589826361751 NA intron (NM_031881, intron 18 of 29) intron (NM_031881, intron 18 of 29) -59940 NR_029600 387231 NR_029600 ENSMUSG00000065402 Mir122 Mir122a|Mirn122a|mir-122|mmu-mir-122 microRNA 122 ncRNA common_peak1_22_121_0.00772346653062339_6.9345990708282_0.304589826361751 chr3 115714545 115715112 + 0.304589826361751 NA 5' UTR (NM_007901, exon 1 of 2) 5' UTR (NM_007901, exon 1 of 2) 227 NM_007901 13609 Mm.982 NM_007901 ENSMUSG00000045092 S1pr1 AI849002|Edg1|Lpb1|S1p|S1p1 sphingosine-1-phosphate receptor 1 protein-coding common_peak1_70_493_-0.0152076857376606_8.94076338871585_0.304568046033399 chr17 33490607 33492185 + 0.304568046033399 NA Intergenic Intergenic -32800 NR_037707 224697 Mm.29304 NM_172619 ENSMUSG00000024299 Adamts10 9430006O18|AW045948|Adam-ts10|Adamts-10|Znmp a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10 protein-coding common_peak2_102_777_-0.0120784612094536_9.59758711438147_0.304534637659453 chr4 3834761 3836190 + 0.304534637659453 NA intron (NM_026147, intron 1 of 3) CpG-9696 125 NM_026147 67427 Mm.21938 NM_026147 ENSMUSG00000028234 Rps20 4632426K06Rik|Dsk4 ribosomal protein S20 protein-coding common_peak1_22_125_-0.0388191194064067_6.95787036379671_0.304532408482644-2 chr13 62879356 62880037 + 0.304532408482644 NA intron (NM_019395, intron 1 of 6) intron (NM_019395, intron 1 of 6) 8586 NM_019395 14121 Mm.423078 NM_019395 ENSMUSG00000069805 Fbp1 Fbp-2|Fbp2|Fbp3 fructose bisphosphatase 1 protein-coding common_peak1_22_125_-0.0388191194064067_6.95787036379671_0.304532408482644-4 chr3 103206772 103207346 + 0.304532408482644 NA Intergenic Intergenic 35348 NM_026602 68183 Mm.104919 NM_026602 ENSMUSG00000005687 Bcas2 6430539P16Rik|AI132645|C76366|C80030 breast carcinoma amplified sequence 2 protein-coding unique_peak2_22_125_-0.0388191194064067_6.95787036379671_0.304532408482644 chr7 80246319 80247001 + 0.304532408482644 NA 5' UTR (NM_177765, exon 1 of 15) 5' UTR (NM_177765, exon 1 of 15) 284 NM_177765 269954 Mm.276780 NM_177765 ENSMUSG00000045467 Ttll13 1700111A04Rik|4921538O11|BC024578 tubulin tyrosine ligase-like family, member 13 protein-coding common_peak2_22_125_-0.0388191194064067_6.95787036379671_0.304532408482644 chr18 15062953 15063923 + 0.304532408482644 NA exon (NM_001142731, exon 1 of 5) exon (NM_001142731, exon 1 of 5) 144 NM_001142731 106931 Mm.329299 NM_134112 ENSMUSG00000036225 Kctd1 4933402K10Rik|AI661543|AW553000 potassium channel tetramerisation domain containing 1 protein-coding common_peak1_22_125_-0.0388191194064067_6.95787036379671_0.304532408482644 chr10 21295603 21295965 + 0.304532408482644 NA promoter-TSS (NM_019702) promoter-TSS (NM_019702) -195 NM_001042593 56422 Mm.25527 NM_019702 ENSMUSG00000019977 Hbs1l 2810035F15Rik|AI326327|eRFS Hbs1-like (S. cerevisiae) protein-coding common_peak2_22_125_-0.0388191194064067_6.95787036379671_0.304532408482644-2 chr2 25982591 25983264 + 0.304532408482644 NA exon (NM_001276361, exon 1 of 18) exon (NM_001276361, exon 1 of 18) 355 NM_001276360 227634 Mm.36834 NM_001115076 ENSMUSG00000026933 Camsap1 9530003A05Rik|C77823|PRO2405 calmodulin regulated spectrin-associated protein 1 protein-coding common_peak1_22_125_-0.0388191194064067_6.95787036379671_0.304532408482644-3 chr19 55098726 55099385 + 0.304532408482644 NA intron (NM_008149, intron 1 of 20) CpG 392 NM_008149 14732 Mm.210196 NM_008149 ENSMUSG00000024978 Gpam GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding unique_peak2_44_282_-0.0184796052672507_8.13541844019826_0.304513657844333 chr8 34806263 34808064 + 0.304513657844333 NA promoter-TSS (NM_176933) promoter-TSS (NM_176933) -447 NM_176933 319520 Mm.170276 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 protein-coding common_peak1_44_282_-0.0184796052672507_8.13541844019826_0.304513657844333 chr8 46471116 46471856 + 0.304513657844333 NA intron (NM_007981, intron 1 of 20) CpG 449 NM_007981 14081 Mm.210323 NM_007981 ENSMUSG00000018796 Acsl1 Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1 acyl-CoA synthetase long-chain family member 1 protein-coding common_peak2_441_4594_0.00330434105896416_12.1675013167059_0.304428823004511 chr7 127110700 127116996 + 0.304428823004511 NA intron (NM_133686, intron 1 of 3) L1MA8|LINE|L1 8181 NM_133686 67375 Mm.26928 NM_133686 ENSMUSG00000030674 Qprt 2410027J01Rik|AI647766|QPRTase quinolinate phosphoribosyltransferase protein-coding common_peak2_142_1148_0.00602726393631414_10.1691767146143_0.304425872955058 chr5 120322179 120324819 + 0.304425872955058 NA Intergenic Intergenic -108387 NM_008499 16873 Mm.5151 NM_008499 ENSMUSG00000029595 Lhx5 Lim2 LIM homeobox protein 5 protein-coding common_peak2_327_3204_-0.00482844288160855_11.6436944200653_0.304423983304452 chr7 92873648 92877069 + 0.304423983304452 NA exon (NM_028243, exon 1 of 9) exon (NM_028243, exon 1 of 9) 105 NM_028243 72461 Mm.389969 NM_028243 ENSMUSG00000061119 Prcp 2510048K03Rik|2610104A14Rik|AI451719|HUMPCP|PCP prolylcarboxypeptidase (angiotensinase C) protein-coding common_peak1_23_127_0.0137754680920947_7.00688773404605_0.304422955819319 chr5 112281199 112281762 + 0.304422955819319 NA intron (NM_009419, intron 1 of 6) intron (NM_009419, intron 1 of 6) 4773 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_23_127_0.0137754680920947_7.00688773404605_0.304422955819319 chr7 120881546 120882567 + 0.304422955819319 NA intron (NM_001267711, intron 6 of 17) intron (NM_001267711, intron 6 of 17) 30867 NM_001267711 13631 Mm.25997 NM_007908 ENSMUSG00000035064 Eef2k C86191|eEF-2K eukaryotic elongation factor-2 kinase protein-coding unique_peak2_23_127_0.0137754680920947_7.00688773404605_0.304422955819319 chr12 25391478 25392621 + 0.304422955819319 NA Intergenic L1_Mur2|LINE|L1 262875 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_277_2599_0.00430118406314151_11.3464464999474_0.304407935991477 chr8 13104016 13106641 + 0.304407935991477 NA promoter-TSS (NM_146207) promoter-TSS (NM_146207) 15 NM_178708 234069 Mm.103427 NM_178708 ENSMUSG00000038542 Pcid2 A730042J05Rik PCI domain containing 2 protein-coding common_peak1_106_813_-0.00991456491047416_9.66392770181101_0.304378971377483 chr17 46202207 46203536 + 0.304378971377483 NA promoter-TSS (NM_030715) promoter-TSS (NM_030715) 16 NM_028198 72322 Mm.275039 NM_028198 ENSMUSG00000067150 Xpo5 2410004H11Rik|2700038C24Rik|AI648907|AW549301|Exp5|RanBp21|mKIAA1291 exportin 5 protein-coding common_peak1_23_131_-0.0306186512663587_7.02908479372527_0.304370755394625-3 chr10 19501564 19502134 + 0.304370755394625 NA Intergenic Intergenic -90109 NM_010511 15979 Mm.549 NM_010511 ENSMUSG00000020009 Ifngr1 CD119|IFN-gammaR|Ifgr|Ifngr|Nktar interferon gamma receptor 1 protein-coding unique_peak2_23_131_-0.0306186512663587_7.02908479372527_0.304370755394625-2 chr10 41526764 41527785 + 0.304370755394625 NA intron (NM_016898, intron 5 of 5) intron (NM_016898, intron 5 of 5) 7774 NM_016898 53599 Mm.269815 NM_016898 ENSMUSG00000019818 Cd164 A115|A24|AA589639|AW540279|MGC-24|MSSP CD164 antigen protein-coding common_peak1_23_131_-0.0306186512663587_7.02908479372527_0.304370755394625 chr1 106687919 106688493 + 0.304370755394625 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) 26084 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak1_23_131_-0.0306186512663587_7.02908479372527_0.304370755394625-2 chr1 128592832 128593350 + 0.304370755394625 NA promoter-TSS (NM_009911) promoter-TSS (NM_009911) -792 NM_009911 12767 Mm.1401 NM_009911 ENSMUSG00000045382 Cxcr4 CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo chemokine (C-X-C motif) receptor 4 protein-coding common_peak2_23_131_-0.0306186512663587_7.02908479372527_0.304370755394625 chr17 88059754 88060720 + 0.304370755394625 NA intron (NM_001081034, intron 1 of 22) ORR1D1|LTR|ERVL-MaLR 5048 NM_001081034 225055 Mm.386857 NM_001081034 ENSMUSG00000005371 Fbxo11 C80048|Jf F-box protein 11 protein-coding unique_peak2_23_131_-0.0306186512663587_7.02908479372527_0.304370755394625 chr1 176826779 176827751 + 0.304370755394625 NA intron (NM_029756, intron 3 of 17) intron (NM_029756, intron 3 of 17) 8868 NR_037996 15365 Mm.441435 NR_037996 Hmga2-ps1 EG666235|Gm7996|Hmgic-ps1|[y]i-c high mobility group AT-hook 2, pseudogene 1 pseudo common_peak2_23_131_-0.0306186512663587_7.02908479372527_0.304370755394625-2 chr6 54776209 54776861 + 0.304370755394625 NA Intergenic Intergenic -40381 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding unique_peak2_46_292_0.00837423300376905_8.19894397092413_0.30435935456738 chr11 119165334 119167145 + 0.30435935456738 NA intron (NM_172443, intron 3 of 11) intron (NM_172443, intron 3 of 11) -12102 NR_105899 102465563 NR_105899 ENSMUSG00000098704 Mir6934 Gm27523|mmu-mir-6934 microRNA 6934 ncRNA common_peak1_46_292_0.00837423300376905_8.19894397092413_0.30435935456738 chr10 79766310 79766865 + 0.30435935456738 NA intron (NR_027505, intron 1 of 7) CpG 365 NM_144528 70294 Mm.466670 NM_144528 ENSMUSG00000035890 Rnf126 2610010O19Rik ring finger protein 126 protein-coding common_peak2_390_3951_0.00382581510326219_11.9502801391363_0.304350458780266 chr8 11554476 11558194 + 0.304350458780266 NA promoter-TSS (NM_011919) promoter-TSS (NM_011919) -122 NM_011919 26356 Mm.25709 NM_011919 ENSMUSG00000045969 Ing1 2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b inhibitor of growth family, member 1 protein-coding common_peak1_107_823_-0.0110683379709116_9.68096635819776_0.304338154971186 chr12 54718934 54719937 + 0.304338154971186 NA Intergenic CpG -23570 NM_025456 66266 Mm.156440 NM_025456 ENSMUSG00000054302 Eapp 1810011O16Rik E2F-associated phosphoprotein protein-coding common_peak1_46_298_-0.0208705867720873_8.21356638081206_0.304325667679318-2 chr16 52125084 52125944 + 0.304325667679318 NA intron (NM_001033238, intron 4 of 17) Lx2B|LINE|L1 93965 NM_001033238 208650 Mm.328206 NM_001033238 ENSMUSG00000022637 Cblb AI429560|AI851073|Cbl-b Casitas B-lineage lymphoma b protein-coding common_peak1_46_298_-0.0208705867720873_8.21356638081206_0.304325667679318 chr12 69513495 69514407 + 0.304325667679318 NA Intergenic ID_B1|SINE|B4 -38401 NR_038061 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak2_46_298_-0.0208705867720873_8.21356638081206_0.304325667679318 chr16 17069402 17070726 + 0.304325667679318 NA promoter-TSS (NM_023249) promoter-TSS (NM_023249) -75 NM_023249 106369 Mm.237941 NM_023249 ENSMUSG00000022773 Ypel1 0610009L05Rik|1700016N17Rik|1700019O22Rik|4921520K19Rik|4930511F14Rik|AV118478|DGL-1|Dgl1|Ppil2|mdgl-1 yippee-like 1 (Drosophila) protein-coding common_peak1_75_527_0.00919470641114906_9.04899147256403_0.304313893709581 chr10 68282632 68283541 + 0.304313893709581 NA Intergenic Intergenic -4360 NM_023598 71371 Mm.440357 NM_023598 ENSMUSG00000019947 Arid5b 4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta AT rich interactive domain 5B (MRF1-like) protein-coding common_peak2_75_535_-0.0125003646881687_9.05983900811369_0.304289248955389 chr3 10439492 10440535 + 0.304289248955389 NA 5' UTR (NM_029068, exon 1 of 8) 5' UTR (NM_029068, exon 1 of 8) 117 NM_029068 74718 Mm.440548 NM_029068 ENSMUSG00000027534 Snx16 4930522N22Rik|AI117577|AI747675 sorting nexin 16 protein-coding common_peak1_47_299_0.0115690887825703_8.23460323488717_0.304281798134425 chr16 3908916 3909692 + 0.304281798134425 NA promoter-TSS (NM_028484) promoter-TSS (NM_028484) 295 NM_029738 76779 Mm.458921 NM_029738 ENSMUSG00000014232 Cluap1 2310030D15Rik|2610111M03Rik clusterin associated protein 1 protein-coding common_peak2_47_299_0.0115690887825703_8.23460323488717_0.304281798134425 chr3 88424493 88425955 + 0.304281798134425 NA promoter-TSS (NM_001281795) promoter-TSS (NM_001281795) -83 NM_001145876 229517 Mm.301740 NM_178696 ENSMUSG00000050144 Slc25a44 6720482A19|B430110G05Rik solute carrier family 25, member 44 protein-coding common_peak1_24_134_0.00919959508555301_7.08141539459361_0.304247021246038 chr16 18621056 18621664 + 0.304247021246038 NA TTS (NM_213614) TTS (NM_213614) 1043 NM_001001999 14724 Mm.475622 NM_010327 ENSMUSG00000050761 Gp1bb - glycoprotein Ib, beta polypeptide protein-coding common_peak2_76_544_-0.0133908788912223_9.08341698021868_0.304235128265072 chr2 167318173 167320877 + 0.304235128265072 NA intron (NM_019835, intron 1 of 8) intron (NM_019835, intron 1 of 8) 29653 NM_019835 56336 Mm.200886 NM_019835 ENSMUSG00000017929 B4galt5 9430078I07Rik|AW049941|AW539721 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 protein-coding common_peak2_76_544_-0.0133908788912223_9.08341698021868_0.304235128265072-2 chr4 134702670 134704417 + 0.304235128265072 NA 5' UTR (NM_207237, exon 1 of 12) 5' UTR (NM_207237, exon 1 of 12) 747 NM_207237 230815 Mm.18905 NM_207237 ENSMUSG00000037306 Man1c1 AI593348 mannosidase, alpha, class 1C, member 1 protein-coding common_peak1_77_545_0.00679861987436503_9.09615645085703_0.304205830761311 chr16 32876964 32878337 + 0.304205830761311 NA promoter-TSS (NM_027226) promoter-TSS (NM_027226) -134 NM_027226 69823 Mm.12831 NM_027226 ENSMUSG00000022800 Fyttd1 2010005M05Rik|3830411L18Rik|3830421F13Rik|4933423A17Rik|AI098218|AW539567|C85190 forty-two-three domain containing 1 protein-coding common_peak1_24_138_-0.0329258805871238_7.10247813242995_0.304200056528757 chr2 160944355 160944979 + 0.304200056528757 NA Intergenic Intergenic -32328 NM_182840 280635 Mm.330747 NM_182840 ENSMUSG00000050700 Emilin3 1110013O17Rik|EMILIN-3|EMILIN-5|EMILIN-T|Emilin5 elastin microfibril interfacer 3 protein-coding unique_peak2_24_138_-0.0329258805871238_7.10247813242995_0.304200056528757 chr16 4559783 4560517 + 0.304200056528757 NA promoter-TSS (NM_031182) promoter-TSS (NM_031182) -430 NM_031182 83383 Mm.273210 NM_031182 ENSMUSG00000005718 Tfap4 AI642933|AP-4|D930048N17Rik|Tcfap4|bHLHc41 transcription factor AP4 protein-coding common_peak1_48_307_0.0100896962157826_8.27183138880279_0.304197471950909 chr14 56571467 56572509 + 0.304197471950909 NA promoter-TSS (NM_001014996) promoter-TSS (NM_001014996) -142 NM_001014996 219103 Mm.212525 NM_001014996 ENSMUSG00000064128 Cenpj 4932437H03Rik|CPAP|Gm81|LAP|LIP1|Sas4 centromere protein J protein-coding common_peak2_48_307_0.0100896962157826_8.27183138880279_0.304197471950909 chr3 122983673 122985240 + 0.304197471950909 NA promoter-TSS (NM_133857) promoter-TSS (NM_133857) -9 NM_133857 99526 Mm.491248 NM_133857 ENSMUSG00000039701 Usp53 AA939927|Phxr3|Sp6|mKIAA1350|mbo ubiquitin specific peptidase 53 protein-coding common_peak2_112_859_0.00732664858294108_9.75185617388093_0.304180714550933 chrX 103492364 103494422 + 0.304180714550933 NA promoter-TSS (NR_015508) promoter-TSS (NR_015508) -165 NR_015508 70252 Mm.380486 NR_015508 ENSMUSG00000097571 Jpx 2010000I03Rik|2510040I06Rik|Enox Jpx transcript, Xist activator (non-protein coding) ncRNA common_peak2_49_315_0.0088467551456386_8.30820412574992_0.304117408752031 chr9 118518341 118520107 + 0.304117408752031 NA intron (NM_018748, intron 2 of 23) intron (NM_018748, intron 2 of 23) 12906 NM_018748 54214 Mm.10409 NM_018748 ENSMUSG00000038708 Golga4 AI225887|AU019508|Olp-1 golgi autoantigen, golgin subfamily a, 4 protein-coding common_peak2_79_562_0.00736773792325884_9.14067498104186_0.304110104827721 chr2 180069867 180071430 + 0.304110104827721 NA promoter-TSS (NM_001083329) promoter-TSS (NM_001083329) 55 NM_001083329 52856 Mm.219658 NM_028422 ENSMUSG00000039069 Mtg2 1810011P19Rik|2900056P18Rik|D2Bwg0647e|Gtpbp5 mitochondrial ribosome associated GTPase 2 protein-coding common_peak1_25_141_0.00567412513624976_7.15258418207281_0.304088432788252-2 chr16 92861713 92862244 + 0.304088432788252 NA Intergenic ORR1E|LTR|ERVL-MaLR -35904 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak2_25_141_0.00567412513624976_7.15258418207281_0.304088432788252 chr14 121880701 121881760 + 0.304088432788252 NA intron (NM_026861, intron 1 of 8) intron (NM_026861, intron 1 of 8) -1822 NR_130999 78312 Mm.188743 NR_130999 ENSMUSG00000102112 1810041H14Rik - RIKEN cDNA 1810041H14 gene ncRNA common_peak1_25_141_0.00567412513624976_7.15258418207281_0.304088432788252 chr11 117322778 117323433 + 0.304088432788252 NA intron (NM_001113487, intron 2 of 10) intron (NM_001113487, intron 2 of 10) -8610 NM_017380 53860 Mm.38450 NM_017380 ENSMUSG00000059248 Sept9 MSF1|Msf|PNUTL4|Sint1 septin 9 protein-coding unique_peak2_25_141_0.00567412513624976_7.15258418207281_0.304088432788252-2 chr4 119814754 119815854 + 0.304088432788252 NA intron (NM_010657, intron 1 of 8) intron (NM_010657, intron 1 of 8) 626 NM_010657 16656 Mm.302758 NM_010657 ENSMUSG00000028634 Hivep3 2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3 human immunodeficiency virus type I enhancer binding protein 3 protein-coding common_peak1_25_141_0.00567412513624976_7.15258418207281_0.304088432788252-3 chr2 84481528 84482057 + 0.304088432788252 NA Intergenic MLTR18B_MM|LTR|ERVK -5017 NM_001177320 21788 Mm.124316 NM_011576 ENSMUSG00000027082 Tfpi A630013F22Rik|AW552122|EPI|LACI tissue factor pathway inhibitor protein-coding unique_peak2_25_141_0.00567412513624976_7.15258418207281_0.304088432788252 chr11 86613980 86614989 + 0.304088432788252 NA intron (NM_029478, intron 7 of 11) T-rich|Low_complexity|Low_complexity -30326 NR_029738 387140 NR_029738 ENSMUSG00000065455 Mir21a Mir21|Mirn21|mmu-mir-21|mmu-mir-21a microRNA 21a ncRNA common_peak1_25_141_0.00567412513624976_7.15258418207281_0.304088432788252-4 chr2 117328320 117328869 + 0.304088432788252 NA intron (NM_011246, intron 2 of 16) intron (NM_011246, intron 2 of 16) 14283 NM_011246 19419 Mm.42150 NM_011246 ENSMUSG00000027347 Rasgrp1 Rasgrp RAS guanyl releasing protein 1 protein-coding common_peak2_49_321_-0.0182893747918769_8.32177219071868_0.304088418743879 chr2 127070155 127071290 + 0.304088418743879 NA promoter-TSS (NM_026678) promoter-TSS (NM_026678) 65 NM_026678 109778 Mm.22028 NM_026678 ENSMUSG00000001999 Blvra 0610006A11Rik|2500001N03Rik|Blvr biliverdin reductase A protein-coding common_peak1_49_321_-0.0182893747918769_8.32177219071868_0.304088418743879 chr17 47293435 47294159 + 0.304088418743879 NA intron (NM_001097623, intron 5 of 19) intron (NM_001097623, intron 5 of 19) 63567 NM_172622 224829 Mm.260989 NM_172622 Trerf1 9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132 transcriptional regulating factor 1 protein-coding common_peak2_79_570_-0.0129880853593551_9.15085289268317_0.30408841382837 chr15 75641475 75643402 + 0.30408841382837 NA Intergenic CpG 25754 NM_011759 22701 Mm.87210 NM_011759 ENSMUSG00000047003 Zfp41 CTfin92|Zfp-41 zinc finger protein 41 protein-coding common_peak2_115_888_0.00584832805551194_9.79896377285753_0.304078108047441 chr7 24529698 24531867 + 0.304078108047441 NA 5' UTR (NM_153134, exon 1 of 3) 5' UTR (NM_153134, exon 1 of 3) 134 NM_153134 210146 Mm.41108 NM_153134 ENSMUSG00000041037 Irgq AF322649|FKSG27|Irgq1 immunity-related GTPase family, Q protein-coding common_peak1_25_145_-0.0344033142390856_7.17262290176047_0.304045953807243-2 chr3 19706315 19706951 + 0.304045953807243 NA Intergenic Intergenic -11237 NM_205769 12918 Mm.290689 NM_205769 ENSMUSG00000049796 Crh CRF|Gm1347 corticotropin releasing hormone protein-coding common_peak1_25_145_-0.0344033142390856_7.17262290176047_0.304045953807243 chr10 127672235 127672810 + 0.304045953807243 NA Intergenic Intergenic -4543 NM_173732 210035 Mm.251075 NM_173732 ENSMUSG00000040195 Nemp1 Tmem194|Tmem194a nuclear envelope integral membrane protein 1 protein-coding common_peak1_25_145_-0.0344033142390856_7.17262290176047_0.304045953807243-4 chr5 36464385 36464902 + 0.304045953807243 NA promoter-TSS (NM_024478) promoter-TSS (NM_024478) 211 NR_126489 76710 Mm.165495 NR_126488 ENSMUSG00000039563 2210406O10Rik - RIKEN cDNA 2210406O10 gene ncRNA common_peak1_25_145_-0.0344033142390856_7.17262290176047_0.304045953807243-3 chr4 62475586 62476175 + 0.304045953807243 NA Intergenic L2b|LINE|L2 -4187 NM_138653 192120 Mm.29808 NM_138653 ENSMUSG00000028392 Bspry - B-box and SPRY domain containing protein-coding common_peak2_50_323_0.00782077424283223_8.34376039000604_0.304041293242394 chr13 93989394 93991238 + 0.304041293242394 NA Intergenic Intergenic -67480 NM_172589 218454 Mm.316553 NM_172589 ENSMUSG00000045312 Lhfpl2 6030465B15|AI447312|AW050335|mKIAA0206|vgim lipoma HMGIC fusion partner-like 2 protein-coding common_peak1_117_907_0.00559022893726713_9.82934360175955_0.304014430990896 chr1 161069985 161071622 + 0.304014430990896 NA promoter-TSS (NM_172644) promoter-TSS (NM_172644) 36 NR_131028 70454 Mm.248212 NM_027429 ENSMUSG00000026708 Cenpl 2610300B10Rik|AW121806|AW550697|CENP-L centromere protein L protein-coding common_peak2_159_1330_-0.00732369472204653_10.3746330085509_0.303975476950187 chr4 124801476 124803484 + 0.303975476950187 NA promoter-TSS (NM_008636) promoter-TSS (NM_008636) -69 NM_008636 17764 Mm.272397 NM_008636 ENSMUSG00000028890 Mtf1 MTF-1|Thyls metal response element binding transcription factor 1 protein-coding common_peak1_82_588_0.00738204533788789_9.2058148464994_0.303974370671989 chr2 39004452 39005743 + 0.303974370671989 NA promoter-TSS (NM_025592) promoter-TSS (NM_025592) 34 NM_025592 66489 Mm.345333 NM_025592 ENSMUSG00000062997 Rpl35 2410039E09Rik ribosomal protein L35 protein-coding common_peak2_118_926_-0.00935315838588657_9.85174894943259_0.303969187680535 chr13 119461920 119463489 + 0.303969187680535 NA promoter-TSS (NM_026127) promoter-TSS (NM_026127) -55 NM_001113550 67392 Mm.390641 NM_026127 ENSMUSG00000062822 4833420G17Rik 2210017J06Rik|5730533D17Rik|AW107518|C85193 RIKEN cDNA 4833420G17 gene protein-coding common_peak2_118_926_-0.00935315838588657_9.85174894943259_0.303969187680535-2 chr16 4963292 4965243 + 0.303969187680535 NA promoter-TSS (NM_001271586) promoter-TSS (NM_001271586) -21 NM_001271586 74684 Mm.374835 NM_001271586 4930451G09Rik - RIKEN cDNA 4930451G09 gene protein-coding common_peak2_51_331_0.00699412448036263_8.37853649358711_0.303968840472384 chr7 58657675 58659159 + 0.303968840472384 NA 5' UTR (NM_009728, exon 1 of 21) 5' UTR (NM_009728, exon 1 of 21) 215 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_26_147_0.0127542012106447_7.21583046623427_0.303964440167268 chr2 157447629 157448432 + 0.303964440167268 NA intron (NM_001025395, intron 2 of 13) B3A|SINE|B2 23737 NM_001025395 20779 Mm.22845 NM_009271 ENSMUSG00000027646 Src AW259666|pp60c-src Rous sarcoma oncogene protein-coding common_peak2_26_147_0.0127542012106447_7.21583046623427_0.303964440167268-2 chr8 104340164 104341426 + 0.303964440167268 NA exon (NM_024217, exon 1 of 5) exon (NM_024217, exon 1 of 5) 201 NM_024217 68119 Mm.390108 NM_024217 ENSMUSG00000031875 Cmtm3 9430096L06Rik|AI413895|BNAS2|Cklfsf3 CKLF-like MARVEL transmembrane domain containing 3 protein-coding common_peak1_26_147_0.0127542012106447_7.21583046623427_0.303964440167268 chr2 101628539 101629047 + 0.303964440167268 NA intron (NM_009020, intron 2 of 2) intron (NM_009020, intron 2 of 2) 193 NM_026592 68170 Mm.31263 NM_026592 ENSMUSG00000027165 B230118H07Rik NWC RIKEN cDNA B230118H07 gene protein-coding common_peak1_51_337_-0.0188458804548954_8.39145649605474_0.30394256150504 chrX 101221949 101222706 + 0.30394256150504 NA exon (NM_001110310, exon 1 of 4) exon (NM_001110310, exon 1 of 4) 236 NM_001110311 55988 Mm.206949 NM_018875 ENSMUSG00000046032 Snx12 2610001F05Rik|AW045757|SDP8 sorting nexin 12 protein-coding common_peak2_51_337_-0.0188458804548954_8.39145649605474_0.30394256150504 chr13 13954465 13955478 + 0.30394256150504 NA intron (NM_178640, intron 1 of 11) CpG 297 NM_178640 97884 Mm.21686 NM_178640 ENSMUSG00000039242 B3galnt2 A930105D20Rik|C80633|D230016N13Rik UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 protein-coding common_peak2_26_151_-0.0257199466039904_7.23506754014159_0.303925313657039 chr16 59458905 59460063 + 0.303925313657039 NA intron (NM_001081190, intron 8 of 8) intron (NM_001081190, intron 8 of 8) 9754 NR_040568 75636 Mm.490522 NR_040568 ENSMUSG00000099983 1700022E09Rik - RIKEN cDNA 1700022E09 gene ncRNA common_peak2_85_614_0.00789688121370347_9.26839104083345_0.30385009465677 chr3 69043732 69045497 + 0.30385009465677 NA 5' UTR (NM_025863, exon 1 of 3) 5' UTR (NM_025863, exon 1 of 3) 128 NM_025863 66949 Mm.176695 NM_025863 ENSMUSG00000034317 Trim59 2310035M22Rik|2700022F13Rik|Mrf1|TSBF1 tripartite motif-containing 59 protein-coding common_peak1_85_614_0.00789688121370347_9.26839104083345_0.30385009465677 chr11 4894718 4895888 + 0.30385009465677 NA promoter-TSS (NM_172438) promoter-TSS (NM_172438) -40 NM_172438 107829 Mm.28969 NM_172438 ENSMUSG00000034274 Thoc5 1700060C24Rik|A430085L24Rik|Fmip|PK1.3|Sgk2 THO complex 5 protein-coding common_peak1_53_346_0.0100280254476903_8.44380586530211_0.303841983056308 chr11 72342264 72342977 + 0.303841983056308 NA Intergenic MIR3|SINE|MIR 18676 NM_001282007 21689 Mm.42257 NM_011569 ENSMUSG00000020799 Tekt1 MT14 tektin 1 protein-coding common_peak1_382_3873_-0.00399794167483414_11.9176092677658_0.303836966981996 chr11 53299244 53301608 + 0.303836966981996 NA promoter-TSS (NM_008300) promoter-TSS (NM_008300) 53 NM_008300 15525 Mm.239865 NM_008300 ENSMUSG00000020361 Hspa4 70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025 heat shock protein 4 protein-coding common_peak2_27_154_0.0104403447436878_7.28134457764608_0.303831914984945-2 chr13 6642164 6643181 + 0.303831914984945 NA intron (NM_001291071, intron 1 of 21) intron (NM_001291071, intron 1 of 21) 6099 NM_019703 56421 Mm.273874 NM_019703 ENSMUSG00000021196 Pfkp 1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P phosphofructokinase, platelet protein-coding common_peak2_27_154_0.0104403447436878_7.28134457764608_0.303831914984945 chr10 85352281 85353715 + 0.303831914984945 NA Intergenic Zaphod|DNA|hAT-Tip100 -33816 NM_028709 74007 Mm.36544 NM_028709 ENSMUSG00000020042 Btbd11 6330404E16Rik BTB (POZ) domain containing 11 protein-coding common_peak2_449_4719_-0.00367460861989599_12.2027338399393_0.303817183759472 chr9 61370562 61375220 + 0.303817183759472 NA 5' UTR (NM_001083928, exon 1 of 20) 5' UTR (NM_001083928, exon 1 of 20) 525 NM_001083927 21887 Mm.24255 NM_009389 ENSMUSG00000032280 Tle3 2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547 transducin-like enhancer of split 3 protein-coding common_peak2_167_1400_0.00507033692674952_10.4547764088942_0.303815921048585 chr17 27055716 27059060 + 0.303815921048585 NA promoter-TSS (NM_080553) promoter-TSS (NM_080553) 84 NM_080553 16440 Mm.458106 NM_080553 ENSMUSG00000042644 Itpr3 IP3R 3|Ip3r3|Itpr-3|tf inositol 1,4,5-triphosphate receptor 3 protein-coding common_peak2_387_3915_0.00339793613242456_11.9368640176699_0.303799731633253 chr18 36559013 36561898 + 0.303799731633253 NA promoter-TSS (NM_175375) promoter-TSS (NM_175375) -148 NM_175375 108857 Mm.482287 NM_175375 ENSMUSG00000024483 Ankhd1 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085 ankyrin repeat and KH domain containing 1 protein-coding common_peak2_27_158_-0.0263182052664304_7.29972385265114_0.303796221259402 chr2 167146150 167146861 + 0.303796221259402 NA intron (NM_008420, intron 1 of 1) intron (NM_008420, intron 1 of 1) 42313 NM_008420 16500 Mm.205341 NM_008420 ENSMUSG00000050556 Kcnb1 Kcr1-1|Kv2.1|Shab potassium voltage gated channel, Shab-related subfamily, member 1 protein-coding common_peak2_168_1422_-0.00690609799707254_10.4712668975279_0.303784508170864 chr12 84243215 84246784 + 0.303784508170864 NA Intergenic MLT1C|LTR|ERVL-MaLR -26118 NM_001163501 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak2_54_354_0.00961580399387074_8.47648311638898_0.303778703072524 chr9 78587353 78588869 + 0.303778703072524 NA promoter-TSS (NM_001276452) promoter-TSS (NM_001276452) -66 NM_001276452 235504 Mm.46932 NM_172773 ENSMUSG00000049624 Slc17a5 4631416G20Rik|4732491M05|AST|ISSD|NSD|SD|SIALIN|SIASD|SLD solute carrier family 17 (anion/sugar transporter), member 5 protein-coding common_peak1_87_632_0.00696067563832159_9.3095420272475_0.303770028485653 chr8 111033795 111034712 + 0.303770028485653 NA 5' UTR (NM_146217, exon 1 of 21) 5' UTR (NM_146217, exon 1 of 21) 411 NM_146217 234734 Mm.24174 NM_146217 ENSMUSG00000031960 Aars AI316495|C76919|sti alanyl-tRNA synthetase protein-coding common_peak2_127_1002_0.00598430607205458_9.97309804364821_0.303732179151581 chr16 93776907 93779992 + 0.303732179151581 NA intron (NM_027293, intron 23 of 36) intron (NM_027293, intron 23 of 36) -53672 NM_001045529 338467 Mm.287329 NM_001045529 ENSMUSG00000039456 Morc3 1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3 microrchidia 3 protein-coding common_peak1_88_641_0.00658888164188554_9.32972392794325_0.303731676424004 chr14 20640857 20642015 + 0.303731676424004 NA Intergenic Intergenic 15104 NM_021508 59011 Mm.439911 NM_021508 ENSMUSG00000068697 Myoz1 2310001N11Rik|AV090278|FATZ|Myoz myozenin 1 protein-coding common_peak2_171_1453_-0.00685976129293131_10.5023816732731_0.303725618509404 chr2 181409189 181412511 + 0.303725618509404 NA 3' UTR (NM_028125, exon 3 of 3) 3' UTR (NM_028125, exon 3 of 3) 13538 NM_027656 72147 Mm.486504 NM_027656 ENSMUSG00000027583 Zbtb46 2610019F01Rik|4933406L05Rik|BZEL|Btbd4 zinc finger and BTB domain containing 46 protein-coding common_peak1_55_362_0.00935132320853072_8.50850139960002_0.303718208477177 chr14 55899787 55900923 + 0.303718208477177 NA promoter-TSS (NM_001082975) promoter-TSS (NM_001082975) -123 NM_001082975 654795 Mm.486218 NM_001082975 ENSMUSG00000022223 Sdr39u1 2310014G06Rik short chain dehydrogenase/reductase family 39U, member 1 protein-coding common_peak1_221_1986_-0.00584567869861807_10.9534533179004_0.303713531688162 chr7 127142041 127145534 + 0.303713531688162 NA Intergenic PB1|SINE|Alu -5964 NM_001037810 20737 Mm.283714 NM_009259 ENSMUSG00000051457 Spn A630014B01Rik|Cd43|Galgp|Ly-48|Ly48 sialophorin protein-coding common_peak2_28_161_0.00881331162794385_7.3442566586986_0.303710842824577 chr7 101360548 101361432 + 0.303710842824577 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) 12921 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding common_peak1_28_161_0.00881331162794385_7.3442566586986_0.303710842824577-3 chr3 88775142 88775767 + 0.303710842824577 NA Intergenic CpG -1603 NR_028359 100302730 Mm.482358 NR_028359 5830417I10Rik 3632445O20Rik|AA387005 gon-4-like pseudogene pseudo common_peak1_28_161_0.00881331162794385_7.3442566586986_0.303710842824577 chr14 64626668 64627272 + 0.303710842824577 NA Intergenic Intergenic -25561 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak1_28_161_0.00881331162794385_7.3442566586986_0.303710842824577-2 chr15 75842100 75842421 + 0.303710842824577 NA promoter-TSS (NM_172121) promoter-TSS (NM_172121) -352 NM_172121 223642 Mm.209800 NM_172121 ENSMUSG00000075600 Zc3h3 BC049953|Kiaa0150|Smicl|Zc3hdc3 zinc finger CCCH type containing 3 protein-coding common_peak1_28_161_0.00881331162794385_7.3442566586986_0.303710842824577-4 chr8 70476431 70476977 + 0.303710842824577 NA intron (NM_178771, intron 1 of 2) CpG 239 NM_001122830 234378 Mm.187090 NM_172052 ENSMUSG00000055707 Klhl26 C630013N10Rik|Klkl26 kelch-like 26 protein-coding common_peak1_172_1463_-0.00648930679149373_10.5124551848883_0.303707155312578 chr10 62485798 62487755 + 0.303707155312578 NA promoter-TSS (NM_133672) promoter-TSS (NM_133672) 29 NM_133672 30930 Mm.260703 NM_133672 ENSMUSG00000020078 Vps26a AA407240|HB58|Vps26 VPS26 retromer complex component A protein-coding common_peak1_55_368_-0.0142999448561145_8.52032703363234_0.303696203883348 chr1 40380548 40381505 + 0.303696203883348 NA Intergenic Intergenic -48544 NM_001294171 17082 Mm.289824 NM_010743 ENSMUSG00000026069 Il1rl1 DER4|Fit-1|Ly84|ST2L|St2|St2-rs1|T1|T1/ST2 interleukin 1 receptor-like 1 protein-coding common_peak1_28_165_-0.0263761168343564_7.36185137292975_0.303678149158727-3 chr9 72449268 72449870 + 0.303678149158727 NA intron (NM_008613, intron 7 of 9) intron (NM_008613, intron 7 of 9) 11040 NM_008613 17427 Mm.387671 NM_008613 ENSMUSG00000032221 Mns1 AW546487 meiosis-specific nuclear structural protein 1 protein-coding common_peak2_28_165_-0.0263761168343564_7.36185137292975_0.303678149158727 chr7 99427971 99428986 + 0.303678149158727 NA intron (NM_201352, intron 4 of 17) intron (NM_201352, intron 4 of 17) -37526 NM_028145 72184 Mm.153585 NM_028145 ENSMUSG00000035298 Klhl35 2810406K13Rik kelch-like 35 protein-coding common_peak1_28_165_-0.0263761168343564_7.36185137292975_0.303678149158727 chr12 33315248 33315952 + 0.303678149158727 NA intron (NM_001033436, intron 1 of 7) intron (NM_001033436, intron 1 of 7) 13085 NM_001033436 380753 Mm.41540 NM_028139 ENSMUSG00000020564 Atxn7l1 2810423G08Rik|Atxn7l4 ataxin 7-like 1 protein-coding common_peak1_28_165_-0.0263761168343564_7.36185137292975_0.303678149158727-2 chr4 126047007 126047552 + 0.303678149158727 NA intron (NM_025544, intron 1 of 7) intron (NM_025544, intron 1 of 7) 351 NM_025544 66407 Mm.195628 NM_025544 ENSMUSG00000028861 Mrps15 1500003E24Rik|2410002B11Rik|Mprs15 mitochondrial ribosomal protein S15 protein-coding common_peak1_541_5927_-0.00324988777207125_12.5317047884198_0.303670530039716 chr8 120488329 120492421 + 0.303670530039716 NA intron (NM_198671, intron 1 of 15) PB1D9|SINE|Alu 1509 NM_198671 382034 Mm.334856 NM_198671 ENSMUSG00000031822 Gse1 2210013I18Rik|mKIAA0182 genetic suppressor element 1, coiled-coil protein protein-coding common_peak1_56_370_0.00922334292937066_8.53988704808549_0.303660319323343 chr19 10948265 10949313 + 0.303660319323343 NA exon (NM_023731, exon 1 of 4) exon (NM_023731, exon 1 of 4) 477 NM_023731 108673 Mm.294908 NM_023731 ENSMUSG00000024732 Ccdc86 4933411H20Rik|6720480F16Rik|D19Ertd678e coiled-coil domain containing 86 protein-coding common_peak2_130_1031_0.00586000642361917_10.0141572586351_0.30365635576097 chr18 24019639 24021489 + 0.30365635576097 NA intron (NM_021559, intron 1 of 3) CpG 207 NM_021559 59057 Mm.417427 NM_021559 ENSMUSG00000051469 Zfp24 3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Zfp191|Znf191|Znf24|Znp191 zinc finger protein 24 protein-coding common_peak1_130_1041_-0.00805230043163441_10.0211134120627_0.303643710766031 chr3 142764513 142766012 + 0.303643710766031 NA promoter-TSS (NM_145546) promoter-TSS (NM_145546) 15 NM_145546 229906 Mm.271756 NM_145546 ENSMUSG00000028271 Gtf2b - general transcription factor IIB protein-coding common_peak1_56_376_-0.0139219937184905_8.55145971640942_0.303639248526441 chr9 54733905 54734500 + 0.303639248526441 NA intron (NM_001025376, intron 1 of 10) intron (NM_001025376, intron 1 of 10) 347 NM_023191 66317 Mm.28437 NM_023191 ENSMUSG00000061559 Wdr61 2700038L12Rik|2810418I05Rik|REC14 WD repeat domain 61 protein-coding common_peak2_56_376_-0.0139219937184905_8.55145971640942_0.303639248526441 chr11 89059811 89061705 + 0.303639248526441 NA promoter-TSS (NR_110336) promoter-TSS (NR_110336) 7 NR_110336 414094 Mm.124287 NM_001001497 Dgkeos A930013B10Rik diacylglycerol kinase, epsilon, opposite strand ncRNA common_peak2_57_378_0.00922158752783275_8.57066483193501_0.303604870838348 chr10 58392358 58393976 + 0.303604870838348 NA intron (NM_201242, intron 1 of 9) intron (NM_201242, intron 1 of 9) -1206 NM_001193303 110829 Mm.57734 NM_026148 ENSMUSG00000019920 Lims1 2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding common_peak2_346_3414_0.00326013311390128_11.7392999297344_0.303602605231981 chr8 123064060 123067226 + 0.303602605231981 NA exon (NM_153176, exon 1 of 17) exon (NM_153176, exon 1 of 17) 135 NM_153176 234847 Mm.292075 NM_153176 ENSMUSG00000000738 Spg7 AI452278|AU015315|Cmar|PGN spastic paraplegia 7 homolog (human) protein-coding common_peak2_29_168_0.00777699631551876_7.40476793443994_0.303599800493858 chr2 73213756 73214560 + 0.303599800493858 NA intron (NM_030091, intron 1 of 7) CpG 289 NM_030091 67059 Mm.22661 NM_025942 ENSMUSG00000027108 Ola1 2510025G09Rik|2810405J23Rik|2810409H07Rik|Gtpbp9|PTD004 Obg-like ATPase 1 protein-coding common_peak1_29_168_0.00777699631551876_7.40476793443994_0.303599800493858-2 chr7 104465321 104465800 + 0.303599800493858 NA promoter-TSS (NM_009099) promoter-TSS (NM_009099) -367 NM_009099 20128 Mm.295578 NM_009099 ENSMUSG00000030921 Trim30a Rpt-1|Rpt1|Trim30 tripartite motif-containing 30A protein-coding unique_peak2_29_168_0.00777699631551876_7.40476793443994_0.303599800493858 chr4 88005181 88006522 + 0.303599800493858 NA intron (NM_027326, intron 2 of 10) B1_Mur1|SINE|Alu 27556 NM_027326 70122 Mm.288898 NM_027326 ENSMUSG00000028496 Mllt3 2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 protein-coding common_peak1_29_168_0.00777699631551876_7.40476793443994_0.303599800493858 chr1 53775445 53775980 + 0.303599800493858 NA intron (NM_133810, intron 2 of 7) intron (NM_133810, intron 2 of 7) 9503 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding unique_peak2_29_172_-0.0259717950390215_7.42164233011721_0.303569743952389 chr16 76224663 76226067 + 0.303569743952389 NA Intergenic Intergenic 102752 NR_040575 78215 Mm.243885 NR_040575 4930578N18Rik - RIKEN cDNA 4930578N18 gene ncRNA common_peak1_29_172_-0.0259717950390215_7.42164233011721_0.303569743952389 chr10 23787379 23787935 + 0.303569743952389 NA promoter-TSS (NM_011295) promoter-TSS (NM_011295) -448 NM_011295 20042 Mm.371846 NM_011295 ENSMUSG00000061983 Rps12 - ribosomal protein S12 protein-coding common_peak2_233_2104_0.00408575899374242_11.0416473974506_0.303554365700278 chr2 121139509 121141548 + 0.303554365700278 NA promoter-TSS (NM_001290811) promoter-TSS (NM_001290811) 100 NM_001290812 75894 Mm.384805 NM_029475 ENSMUSG00000027259 Adal 4930578F03Rik adenosine deaminase-like protein-coding common_peak2_58_393_-0.0165254144145504_8.6137891122491_0.303525947069203 chr3 68792286 68794654 + 0.303525947069203 NA Intergenic Intergenic -76116 NM_001167996 68725 Mm.45741 NM_001167996 ENSMUSG00000046999 1110032F04Rik AI115547 RIKEN cDNA 1110032F04 gene protein-coding common_peak1_58_393_-0.0165254144145504_8.6137891122491_0.303525947069203 chr11 78261700 78262466 + 0.303525947069203 NA intron (NM_001002004, intron 1 of 38) CpG 329 NM_001002004 72503 Mm.237103 NM_001002004 ENSMUSG00000010277 2610507B11Rik AU022687|D11Bhm178e|D11Bhm179e|E1|Kiaa0100|mKIAA0100 RIKEN cDNA 2610507B11 gene protein-coding common_peak2_135_1090_-0.0080621917903656_10.0874042904284_0.303525943160051 chr3 142764501 142766435 + 0.303525943160051 NA intron (NM_145546, intron 1 of 6) CpG 221 NM_145546 229906 Mm.271756 NM_145546 ENSMUSG00000028271 Gtf2b - general transcription factor IIB protein-coding unique_peak2_30_175_0.00725058609700913_7.4630569116858_0.303497591224554 chr13 46337117 46338563 + 0.303497591224554 NA Intergenic Intergenic 64119 NM_001005422 380842 Mm.188108 NM_001005422 ENSMUSG00000063529 Stmnd1 Gm1574 stathmin domain containing 1 protein-coding common_peak1_30_175_0.00725058609700913_7.4630569116858_0.303497591224554-2 chr3 84666061 84666750 + 0.303497591224554 NA exon (NM_177260, exon 1 of 7) exon (NM_177260, exon 1 of 7) 213 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding common_peak1_30_175_0.00725058609700913_7.4630569116858_0.303497591224554 chr1 173438951 173439624 + 0.303497591224554 NA intron (NM_001013779, intron 2 of 8) intron (NM_001013779, intron 2 of 8) 18683 NM_001013779 383619 Mm.131453 NM_001013779 ENSMUSG00000037860 Aim2 Gm1313|Ifi210 absent in melanoma 2 protein-coding common_peak1_30_175_0.00725058609700913_7.4630569116858_0.303497591224554-3 chr7 132780604 132781265 + 0.303497591224554 NA intron (NM_212473, intron 1 of 4) intron (NM_212473, intron 1 of 4) 6001 NM_175268 77938 Mm.225649 NM_175268 ENSMUSG00000030956 Fam53b A930008G19Rik|mKIAA0140 family with sequence similarity 53, member B protein-coding common_peak1_237_2162_-0.00513326853597995_11.076251315694_0.3034947210452 chr4 6365293 6366865 + 0.3034947210452 NA intron (NM_016807, intron 1 of 8) intron (NM_016807, intron 1 of 8) 399 NM_001098227 53378 Mm.247473 NM_016807 ENSMUSG00000028249 Sdcbp MDA-9|Sycl|syntenin-1 syndecan binding protein protein-coding common_peak1_95_704_0.00552064317865231_9.46423976887548_0.303490590920558 chr11 80507956 80509324 + 0.303490590920558 NA non-coding (NR_126552, exon 1 of 3) non-coding (NR_126552, exon 1 of 3) 466 NR_126552 77417 Mm.437510 NR_126552 ENSMUSG00000085078 C030013C21Rik - RIKEN cDNA C030013C21 gene ncRNA common_peak2_185_1587_0.00443383493098892_10.6352121146085_0.303488267775323 chr13 104227656 104229709 + 0.303488267775323 NA promoter-TSS (NR_075088) promoter-TSS (NR_075088) 71 NR_075088 60411 Mm.281498 NM_021790 ENSMUSG00000021714 Cenpk B130045K24Rik|BB232189|C530004N04Rik|Cenp-K|Solt|Solzt centromere protein K protein-coding common_peak1_30_179_-0.0251708915953683_7.47926765053199_0.303469865138411 chr15 81927760 81928391 + 0.303469865138411 NA Intergenic Intergenic -1862 NM_030229 78929 Mm.215115 NM_030229 ENSMUSG00000022476 Polr3h 5031409G22Rik|RPC8 polymerase (RNA) III (DNA directed) polypeptide H protein-coding common_peak1_30_179_-0.0251708915953683_7.47926765053199_0.303469865138411-2 chr7 4339754 4340283 + 0.303469865138411 NA intron (NM_010746, intron 3 of 6) B4|SINE|B4 2294 NM_010746 17086 Mm.240231 NM_010746 ENSMUSG00000062524 Ncr1 Ly94|NKp46 natural cytotoxicity triggering receptor 1 protein-coding common_peak2_30_179_-0.0251708915953683_7.47926765053199_0.303469865138411 chr7 118855052 118856257 + 0.303469865138411 NA promoter-TSS (NM_001168220) promoter-TSS (NM_001168220) -41 NM_001168220 66356 Mm.482278 NM_023197 ENSMUSG00000030980 Knop1 2310008H09Rik|Tsg118 lysine rich nucleolar protein 1 protein-coding common_peak1_96_721_-0.0105166635237612_9.49059669512529_0.303446101599606 chr11 72689897 72690810 + 0.303446101599606 NA intron (NM_009671, intron 1 of 24) intron (NM_009671, intron 1 of 24) 351 NM_009671 11736 Mm.10313 NM_009671 ENSMUSG00000020790 Ankfy1 Ankhzn|ZFYVE14|mKIAA1255 ankyrin repeat and FYVE domain containing 1 protein-coding common_peak2_60_403_0.00630796829517699_8.66136546689938_0.30344573070429 chr6 144909624 144911284 + 0.30344573070429 NA Intergenic Intergenic 138358 NM_001024468 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding common_peak1_97_722_0.00563671114592346_9.50067019252408_0.303429415742841 chr3 138752731 138754086 + 0.303429415742841 NA intron (NR_121195, intron 1 of 7) intron (NR_121195, intron 1 of 7) 11200 NM_019571 56224 Mm.31927 NM_019571 ENSMUSG00000028152 Tspan5 2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9 tetraspanin 5 protein-coding common_peak1_97_730_-0.0102390478553964_9.50860807202474_0.303416232082886 chr7 79273162 79274032 + 0.303416232082886 NA intron (NM_018811, intron 1 of 10) intron (NM_018811, intron 1 of 10) 331 NM_018811 54608 Mm.365490 NM_018811 ENSMUSG00000039202 Abhd2 2210009N18Rik|LABH2|Labh-2 abhydrolase domain containing 2 protein-coding common_peak2_97_730_-0.0102390478553964_9.50860807202474_0.303416232082886 chr5 139298116 139300039 + 0.303416232082886 NA intron (NM_172723, intron 3 of 10) intron (NM_172723, intron 3 of 10) 26387 NM_172723 231821 Mm.297819 NM_172723 ENSMUSG00000056413 Adap1 4930431P11Rik|Centa1|GC1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding common_peak1_31_182_0.00716573602748127_7.51928270629778_0.303403201365231 chr8 105289178 105289847 + 0.303403201365231 NA promoter-TSS (NM_001166394) promoter-TSS (NM_001166394) 16 NM_001166394 74356 Mm.204876 NM_028888 ENSMUSG00000014837 4931428F04Rik AI426165|Kiaa0895l RIKEN cDNA 4931428F04 gene protein-coding common_peak2_31_182_0.00716573602748127_7.51928270629778_0.303403201365231 chr19 53329371 53330106 + 0.303403201365231 NA promoter-TSS (NM_001008543) promoter-TSS (NM_001008543) 325 NM_010847 17859 Mm.2154 NM_010847 ENSMUSG00000025025 Mxi1 ENSMUSG00000067085|Gm10197|Mad2|bHLHc11 MAX interactor 1, dimerization protein protein-coding common_peak2_191_1662_-0.00596005163610513_10.6965924274692_0.303386024878129 chr12 102702548 102706068 + 0.303386024878129 NA intron (NM_172584, intron 1 of 9) intron (NM_172584, intron 1 of 9) 561 NM_172584 217837 Mm.482192 NM_172584 ENSMUSG00000057963 Itpk1 BC031182 inositol 1,3,4-triphosphate 5/6 kinase protein-coding common_peak1_31_186_-0.0240288855761124_7.53488001709958_0.303377544836118-2 chr2 166755035 166755720 + 0.303377544836118 NA Intergenic Intergenic -38390 NM_023815 76367 Mm.330796 NM_023815 ENSMUSG00000042854 Trp53rkb 2810408M09Rik|4933401B08Rik|5630401H01Rik|Nori-2|PRPK|Tp53rk|Trp53rk|Trp53tk|mNori-2p transformation related protein 53 regulating kinase B protein-coding common_peak1_31_186_-0.0240288855761124_7.53488001709958_0.303377544836118-3 chrX 93831651 93832362 + 0.303377544836118 NA promoter-TSS (NM_145630) promoter-TSS (NM_145630) 89 NM_145630 236900 Mm.12775 NM_145630 ENSMUSG00000035232 Pdk3 2610001M10Rik|AI035637 pyruvate dehydrogenase kinase, isoenzyme 3 protein-coding common_peak1_31_186_-0.0240288855761124_7.53488001709958_0.303377544836118 chr17 34605943 34606356 + 0.303377544836118 NA 5' UTR (NM_001163379, exon 1 of 7) 5' UTR (NM_001163379, exon 1 of 7) 288 NM_001163379 55979 Mm.8684 NM_018862 ENSMUSG00000034254 Agpat1 1-AGP|1-AGPAT|AW047140 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) protein-coding common_peak1_99_748_-0.00958209394965515_9.54403086148392_0.303358655193061 chr14 60744288 60746041 + 0.303358655193061 NA intron (NM_001310594, intron 1 of 9) PB1D7|SINE|Alu 12260 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak2_249_2282_0.00401794597635963_11.1587241172129_0.303357761790031 chr9 114015302 114020055 + 0.303357761790031 NA intron (NM_178624, intron 2 of 14) intron (NM_178624, intron 2 of 14) 9073 NM_178624 72179 Mm.386808 NM_178624 ENSMUSG00000032507 Fbxl2 2810423A21Rik|Fbl3 F-box and leucine-rich repeat protein 2 protein-coding common_peak1_62_419_0.00736364228565911_8.71792733880895_0.303353811732069 chr5 114784426 114785256 + 0.303353811732069 NA intron (NM_026718, intron 1 of 14) intron (NM_026718, intron 1 of 14) 9701 NM_026718 68420 Mm.275554 NM_026718 ENSMUSG00000041870 Ankrd13a 1100001D10Rik|ANKRD13|AU046136 ankyrin repeat domain 13a protein-coding common_peak2_144_1169_0.00447608692012302_10.1945308579308_0.303346976093496 chr13 104177695 104179764 + 0.303346976093496 NA promoter-TSS (NM_030731) promoter-TSS (NM_030731) -263 NM_001093760 66975 Mm.272541 NM_025879 ENSMUSG00000021711 Trappc13 2410002O22Rik|2610524F24Rik|AI451892|AU017229 trafficking protein particle complex 13 protein-coding common_peak2_62_425_-0.013100460274055_8.72815939008881_0.303337350155864 chr11 68901427 68902598 + 0.303337350155864 NA intron (NR_003373, intron 1 of 3) intron (NR_003373, intron 1 of 3) 423 NR_003373 100034726 Mm.3229 NR_003373 ENSMUSG00000062353 Gm15772 ENSMUSG00000062353|OTTMUSG00000026108 ribosomal protein L26 pseudogene pseudo common_peak2_145_1189_-0.00781452062332022_10.2128385978836_0.303317684261622 chr10 86777779 86779750 + 0.303317684261622 NA promoter-TSS (NM_175331) promoter-TSS (NM_175331) -241 NM_175331 103466 Mm.200446 NM_175331 ENSMUSG00000054027 Nt5dc3 AU040402|AW540062|C630002B14Rik|TU12B1-TY 5'-nucleotidase domain containing 3 protein-coding unique_peak2_32_189_0.00746433932993185_7.57358777799591_0.303315766648001 chr5 64477593 64478948 + 0.303315766648001 NA intron (NR_045413, intron 1 of 1) intron (NR_045413, intron 1 of 1) 1262 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA common_peak1_32_189_0.00746433932993185_7.57358777799591_0.303315766648001 chr11 48991536 48992316 + 0.303315766648001 NA intron (NM_011579, intron 1 of 1) intron (NM_011579, intron 1 of 1) 320 NM_011579 21822 Mm.15793 NM_011579 ENSMUSG00000078922 Tgtp1 Gtp2|Irgb6|Mg21|Tgtp T cell specific GTPase 1 protein-coding common_peak1_63_427_0.00801089909673358_8.74547243594951_0.303310426422179 chr8 46617440 46618171 + 0.303310426422179 NA promoter-TSS (NM_001001184) promoter-TSS (NM_001001184) 514 NM_009810 12367 Mm.34405 NM_009810 ENSMUSG00000031628 Casp3 A830040C14Rik|AC-3|CASP-3|CC3|CPP-32|CPP32|Caspase-3|Lice|SCA-1|Yama|mldy caspase 3 protein-coding unique_peak2_32_193_-0.0225928945262481_7.588616394924_0.303291956317251 chr11 69845898 69847129 + 0.303291956317251 NA promoter-TSS (NM_023564) promoter-TSS (NM_023564) -104 NM_023564 70310 Mm.28874 NM_023564 ENSMUSG00000019461 Plscr3 2210403O21Rik|2610037N06Rik|ESTM3|X83310 phospholipid scramblase 3 protein-coding common_peak2_102_768_0.00470809581491238_9.58919383586928_0.303286073431746 chr18 74281368 74283759 + 0.303286073431746 NA promoter-TSS (NM_028948) promoter-TSS (NM_028948) -537 NR_029424 74453 Mm.182293 NM_028948 ENSMUSG00000035394 Cfap53 4933415I03Rik|Ccdc11 cilia and flagella associated protein 53 protein-coding common_peak2_64_436_0.00542505083229727_8.77420199491675_0.30326351451842-2 chr9 44137202 44139148 + 0.30326351451842 NA intron (NM_023061, intron 5 of 15) MER20|DNA|hAT-Charlie 3517 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding common_peak2_64_436_0.00542505083229727_8.77420199491675_0.30326351451842 chr1 191325272 191326656 + 0.30326351451842 NA promoter-TSS (NM_025864) promoter-TSS (NM_025864) -1 NM_025864 66950 Mm.236300 NM_025864 ENSMUSG00000026627 Tmem206 2310028N02Rik|AI118576 transmembrane protein 206 protein-coding common_peak1_64_442_-0.0142483682221215_8.78403870444396_0.303248303206717-2 chr4 141790111 141791058 + 0.303248303206717 NA promoter-TSS (NM_172338) promoter-TSS (NM_172338) 60 NM_172338 214063 Mm.39102 NM_172338 ENSMUSG00000040697 Dnajc16 2900037O03Rik|4732437J24Rik|D030060M24|mKIAA0962 DnaJ heat shock protein family (Hsp40) member C16 protein-coding common_peak1_64_442_-0.0142483682221215_8.78403870444396_0.303248303206717 chr2 101810324 101811189 + 0.303248303206717 NA intron (NM_001110849, intron 2 of 9) intron (NM_001110849, intron 2 of 9) -13049 NM_001083810 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding common_peak2_104_794_-0.00923081949489912_9.63019564042427_0.303223404469272 chr4 34885898 34887608 + 0.303223404469272 NA Intergenic CpG -3805 NM_013889 30046 Mm.38193 NM_013889 ENSMUSG00000039967 Zfp292 5730450D02Rik|5830493J20Rik|9430062L07Rik|AI449016|Krox-10|Zfp-15|Zfp15|Zn-15|Zn-16|mKIAA0530 zinc finger protein 292 protein-coding unique_peak2_33_200_-0.020903119018401_7.64060013166973_0.303212389180173 chr7 99962234 99963375 + 0.303212389180173 NA intron (NM_175388, intron 1 of 5) RSINE1|SINE|B4 17654 NM_175388 108937 Mm.323087 NM_175388 ENSMUSG00000058761 Rnf169 2900057K09Rik ring finger protein 169 protein-coding common_peak2_33_200_-0.020903119018401_7.64060013166973_0.303212389180173-2 chr2 29346433 29347347 + 0.303212389180173 NA promoter-TSS (NM_026896) promoter-TSS (NM_026896) 80 NM_029615 68975 Mm.330109 NM_026896 ENSMUSG00000026799 Med27 1500015J03Rik|2310042P07Rik|AA682045|Crsp8|D2Ertd434e mediator complex subunit 27 protein-coding common_peak2_33_200_-0.020903119018401_7.64060013166973_0.303212389180173-3 chr8 46551139 46551935 + 0.303212389180173 NA promoter-TSS (NM_027973) promoter-TSS (NM_027973) -532 NM_027973 71876 Mm.22108 NM_027973 ENSMUSG00000031629 Cenpu 1700029A22Rik|Mlf1ip centromere protein U protein-coding common_peak2_33_200_-0.020903119018401_7.64060013166973_0.303212389180173 chr17 35029530 35030949 + 0.303212389180173 NA exon (NM_013600, exon 20 of 24) exon (NM_013600, exon 20 of 24) -2223 NM_023893 78376 Mm.390966 NM_023893 ENSMUSG00000036185 Sapcd1 2810436B06Rik|G7d|Ng23 suppressor APC domain containing 1 protein-coding common_peak1_65_450_-0.0130513644081436_8.81045794105131_0.303208734584888 chr9 67043221 67043996 + 0.303208734584888 NA exon (NM_001164252, exon 1 of 8) exon (NM_001164252, exon 1 of 8) 263 NM_001164252 22003 Mm.121878 NM_024427 ENSMUSG00000032366 Tpm1 AA986836|AI854628|TM2|Tm3|Tmpa|Tpm-1|alpha-TM tropomyosin 1, alpha protein-coding common_peak1_106_804_0.00612544635379386_9.65590769617888_0.303185305478404 chr15 93272313 93273878 + 0.303185305478404 NA intron (NM_001033275, intron 1 of 7) intron (NM_001033275, intron 1 of 7) 1989 NM_001033275 223827 Mm.22819 NM_001033275 ENSMUSG00000036197 Gxylt1 Glt8d3|Gm1228|Gm87 glucoside xylosyltransferase 1 protein-coding common_peak2_153_1259_0.00412583357214302_10.3012709351734_0.303181674054677 chr11 76478197 76480895 + 0.303181674054677 NA intron (NM_198018, intron 2 of 21) intron (NM_198018, intron 2 of 21) -11081 NM_001291186 109934 Mm.258939 NM_198018 ENSMUSG00000017631 Abr - active BCR-related gene protein-coding common_peak1_66_458_-0.0118066432640838_8.83644702178177_0.303170552822297 chr16 4003846 4004506 + 0.303170552822297 NA Intergenic B2_Mm2|SINE|B2 -2498 NM_177472 52864 Mm.29935 NM_177472 ENSMUSG00000039738 Slx4 AI256635|AI426760|Btbd12|D16Bwg1016e SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) protein-coding common_peak2_34_203_0.00902037255203858_7.67693552824751_0.303158898709287 chr11 46447470 46448885 + 0.303158898709287 NA intron (NR_105955, intron 2 of 4) L1MC5a|LINE|L1 -6754 NM_134250 171285 Mm.72168 NM_134250 ENSMUSG00000020399 Havcr2 TIM-3|Tim3|Timd3 hepatitis A virus cellular receptor 2 protein-coding common_peak2_154_1279_-0.0071403032747348_10.31835794325_0.303156389904408 chr2 71388628 71390473 + 0.303156389904408 NA intron (NM_026115, intron 1 of 10) CpG 290 NM_026115 107435 Mm.272472 NM_026115 ENSMUSG00000027018 Hat1 2410071B14Rik|AA536933|Hat-1|KAT1 histone aminotransferase 1 protein-coding common_peak1_208_1844_-0.00565948442301512_10.8465753587362_0.303153109226942 chr3 37418058 37419637 + 0.303153109226942 NA intron (NM_001291044, intron 1 of 4) intron (NM_001291044, intron 1 of 4) 749 NM_001291044 229228 Mm.436967 NM_153561 ENSMUSG00000050174 Nudt6 Asfgf2b nudix (nucleoside diphosphate linked moiety X)-type motif 6 protein-coding common_peak1_107_822_-0.00931643120931902_9.68009040481697_0.303148507432424 chr18 6764602 6765980 + 0.303148507432424 NA exon (NM_181070, exon 1 of 7) exon (NM_181070, exon 1 of 7) 124 NM_001278447 19330 Mm.132802 NM_181070 ENSMUSG00000073639 Rab18 AA959686 RAB18, member RAS oncogene family protein-coding common_peak1_155_1279_0.00423997709321178_10.324048083434_0.303148093388462 chrX 107149147 107151783 + 0.303148093388462 NA intron (NM_175442, intron 1 of 1) intron (NM_175442, intron 1 of 1) 850 NM_175442 213438 Mm.265244 NM_175442 ENSMUSG00000054293 A630033H20Rik AI662791|P2ry10 RIKEN cDNA A630033H20 gene protein-coding common_peak1_34_207_-0.018994003617558_7.69094271633231_0.303138229584269-2 chr14 25464701 25465383 + 0.303138229584269 NA intron (NM_001310666, intron 1 of 23) intron (NM_001310666, intron 1 of 23) 5857 NM_183208 328365 Mm.227484 NM_183208 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 protein-coding common_peak1_34_207_-0.018994003617558_7.69094271633231_0.303138229584269 chr11 11808406 11808894 + 0.303138229584269 NA intron (NM_021891, intron 1 of 2) intron (NM_021891, intron 1 of 2) 312 NM_021891 60530 Mm.236114 NM_021891 ENSMUSG00000035455 Fignl1 - fidgetin-like 1 protein-coding unique_peak2_34_207_-0.018994003617558_7.69094271633231_0.303138229584269 chr9 123989250 123990455 + 0.303138229584269 NA Intergenic Intergenic -11444 NM_007718 12770 Mm.423532 NM_007718 ENSMUSG00000064039 Ccr1l1 Cmkbr1l1 chemokine (C-C motif) receptor 1-like 1 protein-coding common_peak1_34_207_-0.018994003617558_7.69094271633231_0.303138229584269-4 chr9 107888019 107888721 + 0.303138229584269 NA 5' UTR (NM_028369, exon 1 of 6) 5' UTR (NM_028369, exon 1 of 6) 241 NM_028369 72825 Mm.38037 NM_028369 ENSMUSG00000032583 Mon1a 2810468K17Rik MON1 homolog A, secretory traffciking associated protein-coding common_peak1_34_207_-0.018994003617558_7.69094271633231_0.303138229584269-3 chr4 88779137 88779767 + 0.303138229584269 NA promoter-TSS (NM_001161608) promoter-TSS (NM_001161608) -398 NM_001161608 545648 Mm.368246 NM_001161608 ENSMUSG00000096591 Gm13272 OTTMUSG00000011265 predicted gene 13272 protein-coding common_peak2_270_2534_-0.00430249854329645_11.3056187826191_0.303132390091933 chr11 69670235 69673222 + 0.303132390091933 NA intron (NM_144958, intron 1 of 10) CpG 695 NM_144958 13681 Mm.26680 NM_144958 ENSMUSG00000059796 Eif4a1 BM-010|Ddx2a|Eif4 eukaryotic translation initiation factor 4A1 protein-coding common_peak1_67_467_-0.0136038362365216_8.86356280146514_0.303129167039589 chr2 128390344 128391631 + 0.303129167039589 NA intron (NR_028591, intron 1 of 1) PB1D11|SINE|Alu 38364 NR_028591 100043424 Mm.297222 NR_028589 Gm14005 OTTMUSG00000015351 predicted gene 14005 ncRNA common_peak1_108_831_-0.00869748261145631_9.69609097683536_0.303125507862339 chr11 16996972 16998449 + 0.303125507862339 NA intron (NM_019549, intron 1 of 9) intron (NM_019549, intron 1 of 9) 11008 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding common_peak1_157_1299_0.00441549438385636_10.3465036551077_0.303115544786099 chr17 21649915 21651349 + 0.303115544786099 NA promoter-TSS (NM_001166497) promoter-TSS (NM_001166497) 21 NM_001166497 73229 Mm.296733 NM_001166497 ENSMUSG00000035868 Zfp983 3110052M02Rik|mszf57|mszf71 zinc finger protein 983 protein-coding common_peak1_68_469_0.00607837368179531_8.8795561334059_0.303106859085139 chr11 11711164 11712523 + 0.303106859085139 NA intron (NM_001301866, intron 3 of 5) intron (NM_001301866, intron 3 of 5) 21666 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_68_469_0.00607837368179531_8.8795561334059_0.303106859085139 chr6 30401107 30402630 + 0.303106859085139 NA promoter-TSS (NM_029742) promoter-TSS (NM_029742) 13 NM_001311087 76788 Mm.277308 NM_029742 ENSMUSG00000029775 Klhdc10 2410127E18Rik|AI593221|mKIAA0265 kelch domain containing 10 protein-coding common_peak2_35_210_0.0101984843518377_7.7261984308831_0.303088271055916 chr2 38511293 38512540 + 0.303088271055916 NA promoter-TSS (NM_001159631) promoter-TSS (NM_001159631) 40 NM_001159631 59126 Mm.143818 NM_021606 ENSMUSG00000026749 Nek6 1300007C09Rik NIMA (never in mitosis gene a)-related expressed kinase 6 protein-coding common_peak1_35_210_0.0101984843518377_7.7261984308831_0.303088271055916 chr6 97216478 97217166 + 0.303088271055916 NA intron (NM_022992, intron 1 of 2) intron (NM_022992, intron 1 of 2) 6030 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak1_110_842_0.00452934642261305_9.72165349415339_0.303088265276715 chr2 173659680 173660858 + 0.303088265276715 NA promoter-TSS (NR_027957) promoter-TSS (NR_027957) 424 NM_024436 19334 Mm.275304 NM_024436 ENSMUSG00000027519 Rab22a 3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22 RAB22A, member RAS oncogene family protein-coding common_peak1_110_850_-0.00909715432126745_9.72846674452533_0.303078556439879 chr11 93955079 93956787 + 0.303078556439879 NA promoter-TSS (NM_001077529) promoter-TSS (NM_001077529) -150 NM_001077529 18103 Mm.1260 NM_008705 ENSMUSG00000020857 Nme2 NM23-H2|NM23B|nm23-M2 NME/NM23 nucleoside diphosphate kinase 2 protein-coding common_peak2_69_477_0.007191217729142_8.90446241684532_0.303072136071016 chrX 12587110 12588417 + 0.303072136071016 NA promoter-TSS (NM_027439) promoter-TSS (NM_027439) 4 NM_027439 70495 Mm.25148 NM_027439 ENSMUSG00000031007 Atp6ap2 (P)RR|5730403E06Rik|APT6M8-9|ATP6M8-9|Atp6ip2|M8-9|PRR ATPase, H+ transporting, lysosomal accessory protein 2 protein-coding common_peak1_35_214_-0.0168951765304373_7.73974526132424_0.303068944383749 chr5 35105321 35105778 + 0.303068944383749 NA exon (NM_013587, exon 1 of 8) exon (NM_013587, exon 1 of 8) 148 NM_013587 16976 Mm.277661 NM_013587 ENSMUSG00000029103 Lrpap1 AA617339|AI790446|AU042172|C77774|HBP44|RAP low density lipoprotein receptor-related protein associated protein 1 protein-coding common_peak1_35_214_-0.0168951765304373_7.73974526132424_0.303068944383749-2 chr8 122937788 122938552 + 0.303068944383749 NA intron (NR_037865, intron 2 of 13) intron (NR_037865, intron 2 of 13) 89796 NM_007662 12555 Mm.1976 NM_007662 ENSMUSG00000031962 Cdh15 AI323380|Cdh14|Mcad cadherin 15 protein-coding common_peak1_111_859_-0.00840347719882217_9.74399111099005_0.303057042926945 chr5 30906904 30907777 + 0.303057042926945 NA TTS (NM_001048192) TTS (NM_001048192) 448 NM_001134692 67695 Mm.21450 NM_024460 ENSMUSG00000038803 Ost4 2310016E02Rik oligosaccharyltransferase complex subunit 4 (non-catalytic) protein-coding common_peak1_280_2635_0.00345683219300952_11.3658630711046_0.303046334098437 chr4 149699879 149703300 + 0.303046334098437 NA promoter-TSS (NM_001029837) promoter-TSS (NM_001029837) 40 NM_001029837 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_70_486_0.00538158376467557_8.93046875396468_0.303034434897141 chr13 100491949 100492809 + 0.303034434897141 NA intron (NM_022011, intron 1 of 15) CpG 230 NM_022011 23894 Mm.272533 NM_022011 ENSMUSG00000021639 Gtf2h2 44kDa|BTF2 p44|BTF2-p44|Btf2p44|p44 general transcription factor II H, polypeptide 2 protein-coding common_peak2_70_486_0.00538158376467557_8.93046875396468_0.303034434897141 chr3 100488061 100489954 + 0.303034434897141 NA intron (NM_001142952, intron 1 of 1) CpG 185 NM_001142952 74645 Mm.226900 NM_001142952 ENSMUSG00000044468 Fam46c 4930431B09Rik|AI449797 family with sequence similarity 46, member C protein-coding common_peak2_219_1963_-0.00506357355606468_10.9370474275367_0.303024205798594 chr10 82628627 82630666 + 0.303024205798594 NA promoter-TSS (NM_172552) promoter-TSS (NM_172552) -192 NM_011561 21665 Mm.284252 NM_011561 ENSMUSG00000034674 Tdg E130317C12Rik|JZA-3|Jza1 thymine DNA glycosylase protein-coding unique_peak2_11_54_0.00580344338107963_5.7842614352152_0.303022200133692 chr17 57286773 57287211 + 0.303022200133692 NA intron (NM_001163815, intron 2 of 27) intron (NM_001163815, intron 2 of 27) 7892 NM_001163815 22324 Mm.248172 NM_011691 ENSMUSG00000034116 Vav1 Vav|vav-T vav 1 oncogene protein-coding common_peak2_70_492_-0.0122842905308946_8.93930169111247_0.303022175291277 chr17 73246112 73248179 + 0.303022175291277 NA Intergenic MLT1A0|LTR|ERVL-MaLR 139160 NM_001177967 225010 Mm.329194 NM_001081071 ENSMUSG00000054469 Lclat1 AI181996|Agpat8|Alcat1|Gm91|Lycat lysocardiolipin acyltransferase 1 protein-coding common_peak1_36_218_0.00499659161023658_7.77728535540629_0.303013082381237 chr8 60890396 60890901 + 0.303013082381237 NA intron (NM_028299, intron 1 of 7) CpG 197 NM_028299 72612 Mm.25263 NM_028299 ENSMUSG00000038005 Hpf1 2700029M09Rik|C230006B22Rik|C4orf27 histone PARylation factor 1 protein-coding common_peak2_36_218_0.00499659161023658_7.77728535540629_0.303013082381237 chr13 33951507 33952872 + 0.303013082381237 NA intron (NR_040707, intron 1 of 4) intron (NR_040707, intron 1 of 4) -12470 NM_001163239 18105 Mm.264036 NM_020282 ENSMUSG00000046949 Nqo2 NMO2|Nmor2|Ox2 NAD(P)H dehydrogenase, quinone 2 protein-coding common_peak2_164_1370_0.00441267875997475_10.4232191951592_0.303007658333566 chr8 46868203 46871606 + 0.303007658333566 NA Intergenic MTE-int|LTR|ERVL-MaLR -117021 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|GPC-Cpde|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding common_peak1_114_879_0.00520667744716974_9.78396305224824_0.303001822474111 chr12 108178092 108179357 + 0.303001822474111 NA intron (NM_028262, intron 1 of 12) CpG 560 NM_028262 52690 Mm.159185 NM_028262 ENSMUSG00000056770 Setd3 2610102I01Rik|2610305M23Rik|6030490B17Rik|D12Ertd771e SET domain containing 3 protein-coding common_peak1_164_1380_-0.00607206971884899_10.4284615693986_0.303000479875214 chr1 53772400 53774166 + 0.303000479875214 NA intron (NM_133810, intron 2 of 7) intron (NM_133810, intron 2 of 7) 11932 NM_133810 98267 Mm.25559 NM_133810 ENSMUSG00000026094 Stk17b 3110009A03Rik|AI120141|Drak2 serine/threonine kinase 17b (apoptosis-inducing) protein-coding common_peak2_36_222_-0.0211162487088945_7.79034177556586_0.302995135772234 chr14 47361603 47362918 + 0.302995135772234 NA Intergenic Intergenic -11600 NM_010705 16854 Mm.248615 NM_010705 ENSMUSG00000050335 Lgals3 GBP|L-34|Mac-2|gal3 lectin, galactose binding, soluble 3 protein-coding common_peak2_71_500_-0.0107568089498287_8.96328838872029_0.302990204408075 chr17 32422535 32424805 + 0.302990204408075 NA intron (NM_001271476, intron 1 of 5) intron (NM_001271476, intron 1 of 5) 497 NM_001271476 57757 Mm.86752 NM_021319 ENSMUSG00000079563 Pglyrp2 C730002N09Rik|PGRP-L|Pglyrpl|tagL peptidoglycan recognition protein 2 protein-coding common_peak1_11_56_-0.0457268572590017_5.81002658553524_0.302986303577564 chr1 194991297 194991658 + 0.302986303577564 NA Intergenic Intergenic -14518 NR_033564 320400 Mm.417608 NR_033564 ENSMUSG00000097325 Gm16897 C030002c11rik predicted gene, 16897 ncRNA common_peak2_514_5565_-0.00277172267654713_12.4410393319933_0.302982758886425 chr1 85729683 85736994 + 0.302982758886425 NA intron (NM_177055, intron 1 of 5) RMER15|LTR|ERVL 3268 NM_177055 319997 Mm.116691 NM_177055 ENSMUSG00000052760 A630001G21Rik - RIKEN cDNA A630001G21 gene protein-coding common_peak2_115_897_-0.00868369785586509_9.80622978581321_0.30297097820361 chr17 73941288 73943901 + 0.30297097820361 NA intron (NM_011723, intron 2 of 35) intron (NM_011723, intron 2 of 35) 7602 NM_011723 22436 Mm.11223 NM_011723 ENSMUSG00000024066 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase protein-coding common_peak2_225_2029_-0.00513220271377968_10.9846979107156_0.302959241355241 chr6 125230534 125234626 + 0.302959241355241 NA promoter-TSS (NM_145391) promoter-TSS (NM_145391) -720 NM_145391 213233 Mm.296902 NM_145391 ENSMUSG00000038213 Tapbpl BC017613|TAPBPL-R|Tapbplr TAP binding protein-like protein-coding unique_peak2_37_225_0.00679755216805855_7.82357773849922_0.302951658934071 chr8 46761918 46763836 + 0.302951658934071 NA intron (NM_008391, intron 1 of 8) B3|SINE|B2 23132 NM_008391 16363 Mm.1149 NM_008391 ENSMUSG00000031627 Irf2 9830146E22Rik|AI646973|Irf-2 interferon regulatory factor 2 protein-coding common_peak2_37_225_0.00679755216805855_7.82357773849922_0.302951658934071 chr5 139794870 139796095 + 0.302951658934071 NA intron (NM_010757, intron 1 of 2) intron (NM_010757, intron 1 of 2) 3946 NM_010757 17135 Mm.157313 NM_010757 ENSMUSG00000018143 Mafk AW061068|NF-E2|Nfe2u v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) protein-coding common_peak1_37_229_-0.0185135363611284_7.83623328276381_0.30293480213022 chrX 74297096 74297928 + 0.30293480213022 NA intron (NM_018794, intron 1 of 9) intron (NM_018794, intron 1 of 9) 415 NM_018794 54411 Mm.21961 NM_018794 ENSMUSG00000019087 Atp6ap1 16A|AC45|AI316502|AW108110|Atp6ip1|Atp6s1|C7-1|CF2|VATPS1|XAP-3|mFLJ00383 ATPase, H+ transporting, lysosomal accessory protein 1 protein-coding common_peak2_117_916_-0.00863920736687263_9.83645831991162_0.30293062948605 chr6 47919926 47921773 + 0.30293062948605 NA intron (NM_001145881, intron 1 of 4) CpG 281 NM_001145881 232784 Mm.196782 NM_145576 ENSMUSG00000052763 Zfp212 Znf212|mKIAA3011 Zinc finger protein 212 protein-coding common_peak1_38_232_0.00875730495358074_7.86856479713107_0.302893926201349-2 chr8 11477733 11478609 + 0.302893926201349 NA non-coding (NR_126558, exon 1 of 2) non-coding (NR_126558, exon 1 of 2) 242 NR_126558 102132 Mm.37632 NR_126558 ENSMUSG00000096957 E230013L22Rik AI645545 RIKEN cDNA E230013L22 gene ncRNA common_peak1_38_232_0.00875730495358074_7.86856479713107_0.302893926201349 chr6 52639610 52640495 + 0.302893926201349 NA intron (NM_145567, intron 1 of 7) intron (NM_145567, intron 1 of 7) 248 NM_145567 58875 Mm.286458 NM_145567 ENSMUSG00000029776 Hibadh 6430402H10Rik|AI265272 3-hydroxyisobutyrate dehydrogenase protein-coding common_peak2_38_232_0.00875730495358074_7.86856479713107_0.302893926201349 chr8 105288756 105290010 + 0.302893926201349 NA TTS (NM_177788) TTS (NM_177788) 145 NM_001166394 74356 Mm.204876 NM_028888 ENSMUSG00000014837 4931428F04Rik AI426165|Kiaa0895l RIKEN cDNA 4931428F04 gene protein-coding common_peak1_373_3760_-0.00337060575192538_11.8752152881643_0.302880025753955 chr2 79254895 79258513 + 0.302880025753955 NA intron (NM_010576, intron 2 of 27) intron (NM_010576, intron 2 of 27) 1278 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak2_38_236_-0.0157997992903987_7.88084334925306_0.302878062866625 chr1 106687470 106688865 + 0.302878062866625 NA intron (NM_009741, intron 1 of 1) intron (NM_009741, intron 1 of 1) 26123 NM_009741 12043 Mm.257460 NM_009741 ENSMUSG00000057329 Bcl2 AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik B cell leukemia/lymphoma 2 protein-coding common_peak1_38_236_-0.0157997992903987_7.88084334925306_0.302878062866625 chr10 61319982 61320779 + 0.302878062866625 NA 3' UTR (NM_013753, exon 20 of 20) 3' UTR (NM_013753, exon 20 of 20) 22544 NM_011073 18646 Mm.240313 NM_011073 ENSMUSG00000037202 Prf1 Pfn|Pfp|Prf-1 perforin 1 (pore forming protein) protein-coding common_peak2_374_3757_0.00250594374793245_11.877002323294_0.302877566262284 chr11 108270440 108275521 + 0.302877566262284 NA intron (NM_011101, intron 2 of 16) intron (NM_011101, intron 2 of 16) 70908 NM_011101 18750 Mm.222178 NM_011101 ENSMUSG00000050965 Prkca AI875142|Pkca protein kinase C, alpha protein-coding common_peak1_75_528_0.00646491365557722_9.05035636894181_0.302875442106198 chr3 95870943 95872191 + 0.302875442106198 NA promoter-TSS (NM_078479) promoter-TSS (NM_078479) 45 NR_040446 100042889 Mm.440109 NR_040446 ENSMUSG00000080727 C920021L13Rik - RIKEN cDNA C920021L13 gene ncRNA common_peak1_120_944_-0.00760367447298727_9.88036868187194_0.302874134976678 chr13 34077452 34078794 + 0.302874134976678 NA promoter-TSS (NM_009450) promoter-TSS (NM_009450) -115 NM_009450 22151 Mm.422827 NM_009450 ENSMUSG00000058672 Tubb2a M(beta)2|Tubb2 tubulin, beta 2A class IIA protein-coding common_peak2_302_2891_0.00313087280762403_11.4994172733549_0.302868001777166 chr17 47008013 47011695 + 0.302868001777166 NA intron (NM_146078, intron 1 of 46) intron (NM_146078, intron 1 of 46) 678 NM_146078 224826 Mm.28234 NM_146078 ENSMUSG00000023977 Ubr2 9930021A08Rik|AI462103|AW540746|E130209G04Rik|ENSMUSG00000043296|mKIAA0349 ubiquitin protein ligase E3 component n-recognin 2 protein-coding common_peak2_76_537_0.00525917821644306_9.07409195166484_0.302844598910017 chr9 118395281 118397303 + 0.302844598910017 NA Intergenic Intergenic -33547 NR_040716 71196 Mm.73218 NR_040716 ENSMUSG00000111843 4933432G23Rik - RIKEN cDNA 4933432G23 gene ncRNA common_peak1_238_2160_0.00362115723306999_11.079293935476_0.302837046792663 chr13 96509763 96512335 + 0.302837046792663 NA intron (NM_012048, intron 3 of 14) intron (NM_012048, intron 3 of 14) 31436 NM_012048 27015 Mm.89926 NM_012048 ENSMUSG00000021668 Polk DINP|Dinb1 polymerase (DNA directed), kappa protein-coding common_peak1_39_240_0.00485720258717048_7.91531793752355_0.302832052627278 chr17 35047729 35048576 + 0.302832052627278 NA Intergenic Intergenic -1407 NM_001146215 17687 Mm.24192 NM_013600 ENSMUSG00000007035 Msh5 Mut5 mutS homolog 5 protein-coding common_peak1_12_60_-0.00192840410830986_5.92977313550873_0.302824621390623 chr10 88146970 88147353 + 0.302824621390623 NA promoter-TSS (NM_028334) promoter-TSS (NM_028334) 90 NM_028334 69736 Mm.222184 NM_027191 ENSMUSG00000035351 Nup37 2410003L22Rik|2810039M17Rik nucleoporin 37 protein-coding unique_peak2_12_60_-0.00192840410830986_5.92977313550873_0.302824621390623 chr7 16681989 16682471 + 0.302824621390623 NA Intergenic MERVL-int|LTR|ERVL -6525 NM_175315 101434 Mm.102767 NM_175315 ENSMUSG00000078795 Ceacam15 AA407838|C430002N04Rik carcinoembryonic antigen-related cell adhesion molecule 15 protein-coding common_peak2_385_3892_0.00275097428533044_11.9280421164899_0.302813546207277 chr4 46420541 46424405 + 0.302813546207277 NA Intergenic Intergenic -18290 NM_053149 93966 Mm.25793 NM_053149 ENSMUSG00000028332 Hemgn 4921524M03Rik|AI317176|EDAG|Hgn|mNDR hemogen protein-coding common_peak1_124_974_0.0048623703777313_9.93168959382584_0.30280989232786 chr11 100932525 100934133 + 0.30280989232786 NA intron (NM_213659, intron 1 of 23) B1_Mm|SINE|Alu 6211 NM_213660 20848 Mm.249934 NM_011486 ENSMUSG00000004040 Stat3 1110034C02Rik|AW109958|Aprf signal transducer and activator of transcription 3 protein-coding common_peak1_124_982_-0.00692682732587713_9.93758419267764_0.302802627433181 chr1 88093741 88095618 + 0.302802627433181 NA promoter-TSS (NM_201642) promoter-TSS (NM_201642) -322 NM_201642 394432 Mm.300095 NM_201642 ENSMUSG00000090124 Ugt1a7c A10'|A13|Ugt1a10 UDP glucuronosyltransferase 1 family, polypeptide A7C protein-coding common_peak2_179_1535_-0.00555924078381231_10.5821828803292_0.302801181122145 chr11 60219197 60221275 + 0.302801181122145 NA intron (NM_011480, intron 1 of 18) intron (NM_011480, intron 1 of 18) 391 NM_011480 20787 Mm.278701 NM_011480 ENSMUSG00000020538 Srebf1 ADD1|SREBP-1a|SREBP1|SREBP1c|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding common_peak1_242_2205_0.00325952355478165_11.1088468373688_0.302800218281317 chr17 21449863 21452219 + 0.302800218281317 NA intron (NM_009558, intron 1 of 4) intron (NM_009558, intron 1 of 4) 667 NM_009558 22709 Mm.293030 NM_009558 ENSMUSG00000023892 Zfp51 Zfp-51|zfec12 zinc finger protein 51 protein-coding common_peak1_12_62_-0.0484709900453399_5.95304442847725_0.302795439836264 chr19 10894736 10895135 + 0.302795439836264 NA promoter-TSS (NM_001253843) promoter-TSS (NM_001253843) -296 NM_134129 28000 Mm.491104 NM_134129 ENSMUSG00000024735 Prpf19 AA617263|AL024362|D19Wsu55e|NMP200|PSO4|Prp19|Snev pre-mRNA processing factor 19 protein-coding common_peak1_78_554_0.00575512987584759_9.11922152617539_0.302789066360106 chr10 111473109 111474121 + 0.302789066360106 NA intron (NM_015781, intron 1 of 15) CpG 423 NM_015781 53605 Mm.290407 NM_015781 ENSMUSG00000058799 Nap1l1 AA407126|AI256722|D10Ertd68e|NAP-1 nucleosome assembly protein 1-like 1 protein-coding common_peak1_125_992_-0.00742843639023505_9.95193568933326_0.302784722036393 chr12 25268935 25270334 + 0.302784722036393 NA Intergenic Intergenic 140460 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_40_247_0.00724695467855074_7.95781978772615_0.302781187836328 chr6 90604627 90605377 + 0.302781187836328 NA 5' UTR (NM_027868, exon 1 of 11) 5' UTR (NM_027868, exon 1 of 11) 122 NM_027868 71699 Mm.272633 NM_027868 ENSMUSG00000030089 Slc41a3 1010001P06Rik|AI480742|SLC41A1-L2 solute carrier family 41, member 3 protein-coding common_peak1_79_563_0.00480749760469479_9.14195510120114_0.302761020879682-2 chr5 124496347 124497920 + 0.302761020879682 NA intron (NM_021430, intron 6 of 6) intron (NM_021430, intron 6 of 6) 13978 NM_029532 76167 Mm.156035 NM_029532 ENSMUSG00000029402 Snrnp35 6330548G22Rik small nuclear ribonucleoprotein 35 (U11/U12) protein-coding common_peak1_79_563_0.00480749760469479_9.14195510120114_0.302761020879682 chr4 44071719 44073300 + 0.302761020879682 NA 5' UTR (NM_001190414, exon 1 of 12) 5' UTR (NM_001190414, exon 1 of 12) 164 NM_001190414 50798 Mm.256718 NM_015828 ENSMUSG00000028479 Gne 2310066H07Rik|DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding common_peak2_79_563_0.00480749760469479_9.14195510120114_0.302761020879682 chr19 24279441 24281141 + 0.302761020879682 NA intron (NM_008044, intron 1 of 4) CpG 295 NM_008044 14297 Mm.7319 NM_008044 ENSMUSG00000059363 Fxn FA|FARR|Frda|X25 frataxin protein-coding common_peak2_127_1003_0.00454664273346417_9.9738168753175_0.302758532056163 chr14 122982558 122984219 + 0.302758532056163 NA promoter-TSS (NM_028651) promoter-TSS (NM_028651) -127 NM_028651 70551 Mm.271988 NM_028651 ENSMUSG00000041594 Tmtc4 4930403J22Rik|5730419O14Rik transmembrane and tetratricopeptide repeat containing 4 protein-coding common_peak2_80_572_0.00395075423597291_9.16436670587489_0.302733855643492 chr16 17890811 17892302 + 0.302733855643492 NA 5' UTR (NM_001109750, exon 1 of 10) 5' UTR (NM_001109750, exon 1 of 10) 172 NM_010048 13356 Mm.254515 NM_010048 ENSMUSG00000003166 Dgcr2 9930034O06Rik|DGS-C|Dgsc|Idd|Lan|Sez12|mKIAA0163 DiGeorge syndrome critical region gene 2 protein-coding common_peak1_41_255_0.00408695498485478_8.00204347749243_0.302726462798253 chr17 8371814 8372692 + 0.302726462798253 NA promoter-TSS (NM_001161832) promoter-TSS (NM_001161832) -143 NM_001161832 21331 Mm.482744 NM_013682 T2 brachyury2 brachyury 2 protein-coding common_peak1_80_578_-0.0110774549963573_9.17188081049106_0.302724989049734 chr10 127320710 127321919 + 0.302724989049734 NA promoter-TSS (NM_001285785) promoter-TSS (NM_001285785) -650 NM_001285785 216445 Mm.227198 NM_146011 ENSMUSG00000040345 Arhgap9 AU043488 Rho GTPase activating protein 9 protein-coding common_peak2_80_578_-0.0110774549963573_9.17188081049106_0.302724989049734 chr3 8922854 8924477 + 0.302724989049734 NA exon (NM_025434, exon 1 of 3) exon (NM_025434, exon 1 of 3) 192 NM_025434 66230 Mm.38460 NM_025434 ENSMUSG00000040269 Mrps28 1500012D08Rik|AW061224 mitochondrial ribosomal protein S28 protein-coding common_peak2_129_1023_0.00352683151925248_10.0017634157596_0.302724804473964 chr13 55470874 55473082 + 0.302724804473964 NA 5' UTR (NM_001030296, exon 2 of 3) 5' UTR (NM_001030296, exon 2 of 3) 5798 NR_105909 102465569 NR_105909 ENSMUSG00000098341 Mir6944 Gm27710|mmu-mir-6944 microRNA 6944 ncRNA common_peak1_41_259_-0.0182808580435996_8.01322738400665_0.302713311823994 chr8 116905445 116906558 + 0.302713311823994 NA intron (NM_026844, intron 2 of 3) intron (NM_026844, intron 2 of 3) 15435 NM_026844 66531 Mm.4011 NM_026844 ENSMUSG00000014633 Cmc2 1110046L09Rik|2310061C15Rik|DC13 COX assembly mitochondrial protein 2 protein-coding common_peak2_81_580_0.00566122284725346_9.18522496482815_0.302710414696832 chr11 107431178 107433126 + 0.302710414696832 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 38568 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_81_586_-0.00916111685826948_9.19263613468092_0.302701789773053 chr6 34475719 34476828 + 0.302701789773053 NA promoter-TSS (NM_007563) promoter-TSS (NM_007563) -83 NM_007563 12183 Mm.282863 NM_007563 ENSMUSG00000038871 Bpgm AI323730|AL022789|C86192 2,3-bisphosphoglycerate mutase protein-coding common_peak1_588_6540_0.00194689065739162_12.6762689444228_0.302688874665702 chr17 6656120 6662287 + 0.302688874665702 NA Intergenic Intergenic -3264 NM_001166627 100040531 Mm.457987 NM_001166627 ENSMUSG00000095677 Dynlt1f 100040631|Dynlt1e dynein light chain Tctex-type 1F protein-coding common_peak1_328_3213_-0.00348701698360721_11.6484107051833_0.302687608516933 chr1 165699726 165703596 + 0.302687608516933 NA intron (NM_178593, intron 1 of 6) B4|SINE|B4 6433 NM_178593 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding common_peak2_328_3213_-0.00348701698360721_11.6484107051833_0.302687608516933 chr10 75588077 75593359 + 0.302687608516933 NA intron (NM_011820, intron 1 of 11) intron (NM_011820, intron 1 of 11) 1337 NM_011820 23887 Mm.257927 NM_011820 ENSMUSG00000006344 Ggt5 AI551243|GGL|GGT-REL|Ggtla1 gamma-glutamyltransferase 5 protein-coding common_peak1_42_262_0.0068081809616487_8.04232307977313_0.302681309460009 chr12 25413772 25414564 + 0.302681309460009 NA Intergenic Intergenic 284994 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak2_42_262_0.0068081809616487_8.04232307977313_0.302681309460009 chr5 107730762 107732291 + 0.302681309460009 NA Intergenic Intergenic -5721 NM_001267621 14581 Mm.2078 NM_010278 ENSMUSG00000029275 Gfi1 AW495828|Gfi-1|Pal-1|Pal1 growth factor independent 1 protein-coding common_peak2_132_1060_-0.00730862825240486_10.0475546267886_0.302671941752202 chr5 104045877 104048092 + 0.302671941752202 NA 5' UTR (NM_028794, exon 1 of 8) 5' UTR (NM_028794, exon 1 of 8) 120 NM_028794 74167 Mm.241484 NM_028794 ENSMUSG00000029310 Nudt9 1190002C07Rik|ADPR-PPase|AI462474 nudix (nucleoside diphosphate linked moiety X)-type motif 9 protein-coding common_peak1_42_266_-0.0149687614336038_8.05321155097075_0.302668846654986 chr13 100588523 100589201 + 0.302668846654986 NA Intergenic B4|SINE|B4 28082 NM_178410 218518 Mm.25300 NM_178410 ENSMUSG00000021636 Marveld2 BC003296|MARVD2|Mrvldc2|Tric|Trica|Tricb|Tricc MARVEL (membrane-associating) domain containing 2 protein-coding common_peak1_13_66_-0.00613675162620186_6.06302081464467_0.302662697069732-2 chr16 38476482 38476806 + 0.302662697069732 NA intron (NM_009855, intron 2 of 4) intron (NM_009855, intron 2 of 4) 17711 NM_009855 12519 Mm.89474 NM_009855 ENSMUSG00000075122 Cd80 B71|Cd28l|Ly-53|Ly53|MIC17|TSA1 CD80 antigen protein-coding common_peak1_13_66_-0.00613675162620186_6.06302081464467_0.302662697069732 chr13 63249379 63249669 + 0.302662697069732 NA intron (NM_001289924, intron 13 of 16) intron (NM_001289924, intron 13 of 16) 9495 NR_110521 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|AP-O|AW742919|Aopep|ApO|mir-23b|mir-24-1|mir-27b RIKEN cDNA 2010111I01 gene protein-coding unique_peak2_13_66_-0.00613675162620186_6.06302081464467_0.302662697069732 chr17 5063369 5064053 + 0.302662697069732 NA intron (NM_001085355, intron 2 of 19) intron (NM_001085355, intron 2 of 19) 68637 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding common_peak2_192_1662_0.00323283915898998_10.7011888728668_0.302660720527291 chr4 58910925 58913336 + 0.302660720527291 NA intron (NM_172381, intron 1 of 48) CpG 595 NM_172381 230249 Mm.234801 NM_172381 ENSMUSG00000050812 AI314180 AW558785|BB181316|mKIAA0368 expressed sequence AI314180 protein-coding common_peak2_83_604_-0.0100920659907455_9.23574529916658_0.302651843951975 chr9 59616441 59618084 + 0.302651843951975 NA promoter-TSS (NM_001205239) promoter-TSS (NM_001205239) -22 NR_038075 67287 Mm.439943 NM_029922 ENSMUSG00000025237 Parp6 1700119G14Rik|2310028P13Rik|3110038K10Rik|ARTD17|C030013N01Rik|PARP-6 poly (ADP-ribose) polymerase family, member 6 protein-coding common_peak1_13_68_-0.0485720179465989_6.08423844780487_0.302638508455059-2 chr2 25371828 25372271 + 0.302638508455059 NA promoter-TSS (NM_001081085) promoter-TSS (NM_001081085) 14 NM_001081085 72080 Mm.250293 NM_001081085 ENSMUSG00000026955 Sapcd2 2010317E24Rik|6030458L21Rik|AL033337|ang suppressor APC domain containing 2 protein-coding common_peak1_13_68_-0.0485720179465989_6.08423844780487_0.302638508455059-3 chr5 25705909 25706252 + 0.302638508455059 NA promoter-TSS (NM_020570) promoter-TSS (NM_020570) -283 NM_020570 57434 Mm.143767 NM_020570 ENSMUSG00000028933 Xrcc2 4921524O04Rik|8030409M04Rik|RAD51|RecA X-ray repair complementing defective repair in Chinese hamster cells 2 protein-coding common_peak1_13_68_-0.0485720179465989_6.08423844780487_0.302638508455059 chr14 64650249 64650599 + 0.302638508455059 NA Intergenic Intergenic -2107 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak1_43_274_-0.0168777545317145_8.09484893114616_0.302620821499457 chr4 59223009 59223655 + 0.302620821499457 NA TTS (NM_011673) TTS (NM_011673) 33782 NM_011673 22234 Mm.198803 NM_011673 ENSMUSG00000028381 Ugcg AU043821|C80537|Epcs21|GlcT-1|Ugcgl UDP-glucose ceramide glucosyltransferase protein-coding common_peak2_43_274_-0.0168777545317145_8.09484893114616_0.302620821499457 chr13 110557764 110559228 + 0.302620821499457 NA Intergenic Intergenic 163452 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo-like kinase 2 protein-coding common_peak1_85_615_0.00555294074540313_9.2695630110676_0.302615013584873 chr1 120073131 120074053 + 0.302615013584873 NA intron (NM_019432, intron 1 of 1) intron (NM_019432, intron 1 of 1) 188 NM_019432 170706 Mm.24750 NM_019432 ENSMUSG00000050777 Tmem37 AI173373|AW540203|Pr|Pr1 transmembrane protein 37 protein-coding common_peak2_44_277_0.00723756484112492_8.12255985514407_0.302592209399544 chr17 12745183 12746741 + 0.302592209399544 NA intron (NR_027773, intron 1 of 2) intron (NR_027773, intron 1 of 2) 4651 NR_027784 104103 Mm.26553 NR_002853 ENSMUSG00000078247 Airn 2810051F02Rik|2810434M15Rik|AI256653|AI597500|AW049873|Air|B930018I07Rik|D17Ertd663e|IGF2RAS antisense Igf2r RNA ncRNA common_peak2_86_624_0.00508545111640402_9.29025510510765_0.302592207528162 chr11 74770238 74771659 + 0.302592207528162 NA promoter-TSS (NM_026197) promoter-TSS (NM_026197) 85 NM_026197 67493 Mm.45748 NM_026197 ENSMUSG00000010554 Mettl16 2610100D03Rik|2810013M15Rik|A830095F14Rik|AI846133|Mett10d methyltransferase like 16 protein-coding common_peak2_86_630_-0.00869836431669668_9.2971470128242_0.302584750655578 chr8 71536861 71538426 + 0.302584750655578 NA promoter-TSS (NM_198095) promoter-TSS (NM_198095) -206 NM_198095 69550 Mm.260325 NM_198095 ENSMUSG00000046718 Bst2 2310015I10Rik|Bst-2|C87040|CD317|DAMP-1|GREG bone marrow stromal cell antigen 2 protein-coding common_peak2_45_285_0.00520177850147618_8.16247222602913_0.30254851093265 chr3 121329553 121330925 + 0.30254851093265 NA intron (NM_024178, intron 3 of 3) intron (NM_024178, intron 3 of 3) 38422 NM_024178 66789 Mm.269881 NM_024178 ENSMUSG00000039887 Alg14 5430428G01Rik|AI854024 asparagine-linked glycosylation 14 protein-coding common_peak2_45_289_-0.0148359747350693_8.1724911026474_0.302537965645192 chr8 106888026 106890007 + 0.302537965645192 NA intron (NM_145412, intron 1 of 3) intron (NM_145412, intron 1 of 3) 4577 NM_145412 214987 Mm.490308 NM_145412 ENSMUSG00000046691 Chtf8 5830457O10Rik|Ctf8|Derpc CTF8, chromosome transmission fidelity factor 8 protein-coding common_peak2_45_289_-0.0148359747350693_8.1724911026474_0.302537965645192-2 chr8 110217092 110218503 + 0.302537965645192 NA promoter-TSS (NM_146215) promoter-TSS (NM_146215) -163 NM_146215 234728 Mm.275341 NM_146215 ENSMUSG00000046441 Cmtr2 AU022703|C730036L12Rik|Ftsjd1|MTr2 cap methyltransferase 2 protein-coding common_peak1_14_72_-0.00778043746866963_6.18593434014568_0.302527574714518-2 chr4 62456387 62456764 + 0.302527574714518 NA intron (NM_001290521, intron 9 of 10) RMER4A|LTR|ERVK 14320 NM_001290522 71354 Mm.155573 NM_023597 ENSMUSG00000028391 Wdr31 5430402I10Rik|spWD WD repeat domain 31 protein-coding unique_peak2_14_72_-0.00778043746866963_6.18593434014568_0.302527574714518 chr11 106098279 106098841 + 0.302527574714518 NA intron (NM_011947, intron 2 of 15) intron (NM_011947, intron 2 of 15) 13658 NM_011947 26406 Mm.27041 NM_011947 ENSMUSG00000020700 Map3k3 AW548911|MAPKKK3|Mekk3|mKIAA4031 mitogen-activated protein kinase kinase kinase 3 protein-coding common_peak1_14_72_-0.00778043746866963_6.18593434014568_0.302527574714518 chr17 46830049 46830458 + 0.302527574714518 NA intron (NM_001100452, intron 1 of 10) intron (NM_001100452, intron 1 of 10) 1160 NM_001100452 210982 Mm.37642 NM_001100452 ENSMUSG00000036568 Gltscr1l mKIAA0240 GLTSCR1-like protein-coding common_peak2_89_657_-0.00915282498425363_9.35736736124311_0.302520710289767-2 chr6 91678474 91680022 + 0.302520710289767 NA Intergenic Intergenic -4819 NM_009320 21366 Mm.395650 NM_009320 ENSMUSG00000030096 Slc6a6 AA589629|C80501|Taut solute carrier family 6 (neurotransmitter transporter, taurine), member 6 protein-coding common_peak2_89_657_-0.00915282498425363_9.35736736124311_0.302520710289767 chr11 79338816 79340538 + 0.302520710289767 NA promoter-TSS (NM_010897) promoter-TSS (NM_010897) -215 NM_010897 18015 Mm.255596 NM_010897 ENSMUSG00000020716 Nf1 AW494271|Dsk9|E030030H24Rik|Mhdadsk9|Nf-1 neurofibromin 1 protein-coding common_peak1_89_657_-0.00915282498425363_9.35736736124311_0.302520710289767 chr1 36265865 36267511 + 0.302520710289767 NA intron (NM_153408, intron 3 of 3) intron (NM_153408, intron 3 of 3) 6737 NM_153408 214854 Mm.389110 NM_153408 ENSMUSG00000047180 Neurl3 2010300P06Rik|Lincr neuralized E3 ubiquitin protein ligase 3 protein-coding common_peak1_14_74_-0.0467745690845325_6.20543140595361_0.302507199172891 chr15 86172089 86172486 + 0.302507199172891 NA intron (NM_145475, intron 1 of 12) intron (NM_145475, intron 1 of 12) 13854 NM_145475 223753 Mm.222685 NM_145475 ENSMUSG00000035891 Cerk AI848610|D330016D08Rik|mKIAA1646 ceramide kinase protein-coding unique_peak2_14_74_-0.0467745690845325_6.20543140595361_0.302507199172891 chr13 4608665 4609266 + 0.302507199172891 NA intron (NM_018859, intron 1 of 9) intron (NM_018859, intron 1 of 9) 199 NM_018859 56043 Mm.251908 NM_018859 ENSMUSG00000045410 Akr1e1 1810061I10Rik|Akr1e2 aldo-keto reductase family 1, member E1 protein-coding unique_peak2_14_74_-0.0467745690845325_6.20543140595361_0.302507199172891-2 chr15 37784734 37785418 + 0.302507199172891 NA intron (NM_134094, intron 1 of 6) intron (NM_134094, intron 1 of 6) 6924 NM_001170866 52589 Mm.283370 NM_134094 ENSMUSG00000051359 Ncald AI848120|D030020D09Rik|D15Ertd412e neurocalcin delta protein-coding common_peak1_46_293_0.00345874258965395_8.20140171613119_0.302507190627709 chr6 99387763 99388645 + 0.302507190627709 NA intron (NM_053202, intron 1 of 18) intron (NM_053202, intron 1 of 18) 47141 NM_053202 108655 Mm.234965 NM_053202 ENSMUSG00000030067 Foxp1 3110052D19Rik|4932443N09Rik|AI461938|AW494214 forkhead box P1 protein-coding common_peak1_145_1180_0.00313808817482908_10.2073622934846_0.302499690043547 chr11 50430243 50431571 + 0.302499690043547 NA exon (NM_172557, exon 1 of 18) exon (NM_172557, exon 1 of 18) 204 NM_172557 216724 Mm.390400 NM_172557 ENSMUSG00000020375 Rufy1 3000002E04Rik|Rabip4|ZFYVE12 RUN and FYVE domain containing 1 protein-coding common_peak1_145_1188_-0.00660166217367042_10.2122321686588_0.302494733228401 chr10 20951686 20953364 + 0.302494733228401 NA promoter-TSS (NM_026203) promoter-TSS (NM_026203) -22 NM_026203 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak2_210_1854_0.0033958676307968_10.8589014053236_0.302492070176132 chr11 16985391 16990168 + 0.302492070176132 NA intron (NM_019549, intron 5 of 9) intron (NM_019549, intron 5 of 9) 20939 NM_019549 56193 Mm.98232 NM_019549 ENSMUSG00000020120 Plek 2010300B13Rik pleckstrin protein-coding common_peak2_47_300_0.00676810251875004_8.23700372801908_0.302472837128368 chr6 130106300 130108035 + 0.302472837128368 NA intron (NM_013793, intron 3 of 7) intron (NM_013793, intron 3 of 7) 22668 NM_010650 16639 Mm.439698 NM_010650 ENSMUSG00000089727 Klra8 Cmv-1|Cmv1|Ly49h|Ly49u<129> killer cell lectin-like receptor, subfamily A, member 8 protein-coding common_peak1_94_696_0.00345494440678884_9.44674231807182_0.302430946685527 chr15 31530008 31531086 + 0.302430946685527 NA intron (NM_172606, intron 1 of 25) CpG 490 NM_172606 223455 Mm.272185 NM_172606 ENSMUSG00000039100 March6 3830408G03|F830029L24Rik|mKIAA0597 membrane-associated ring finger (C3HC4) 6 protein-coding common_peak1_94_696_0.00345494440678884_9.44674231807182_0.302430946685527-2 chr15 77928335 77929814 + 0.302430946685527 NA promoter-TSS (NM_019913) promoter-TSS (NM_019913) -80 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_151_1240_0.00291373682560092_10.2787442685432_0.302428690251387 chr3 96171479 96173314 + 0.302428690251387 NA promoter-TSS (NM_153053) promoter-TSS (NM_153053) -110 NM_153053 107701 Mm.219671 NM_153053 ENSMUSG00000068856 Sf3b4 SF3b49|SF3b50|Sap49 splicing factor 3b, subunit 4 protein-coding common_peak2_293_2799_-0.00358804758200648_11.4494170880413_0.302427939545863 chr5 30154103 30156684 + 0.302427939545863 NA promoter-TSS (NM_178878) promoter-TSS (NM_178878) 140 NM_001289798 231086 Mm.291463 NM_145558 ENSMUSG00000059447 Hadhb 4930479F15Rik|Mtpb|TP-beta hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit protein-coding common_peak1_48_312_-0.0131426100219336_8.28344754192165_0.302426443349899 chr17 35823142 35823842 + 0.302426443349899 NA TTS (NM_133662) TTS (NM_133662) 135 NM_008027 14251 Mm.2931 NM_008027 ENSMUSG00000059714 Flot1 reggie-2 flotillin 1 protein-coding common_peak1_15_78_-0.00752748505193512_6.30001700565114_0.302413108461692 chr13 21765773 21766210 + 0.302413108461692 NA Intergenic MMVL30-int|LTR|ERV1 11868 NM_178201 319187 NM_178201 ENSMUSG00000095217 Hist1h2bn - histone cluster 1, H2bn protein-coding common_peak1_15_78_-0.00752748505193512_6.30001700565114_0.302413108461692-2 chr3 103397777 103398114 + 0.302413108461692 NA Intergenic Intergenic 118652 NM_001079830 94093 Mm.195036 NM_053170 ENSMUSG00000033014 Trim33 8030451N04Rik|AI413936|Ecto|Tif1g tripartite motif-containing 33 protein-coding common_peak1_15_78_-0.00752748505193512_6.30001700565114_0.302413108461692-3 chr5 125054279 125054689 + 0.302413108461692 NA intron (NM_001253904, intron 18 of 47) MIR|SINE|MIR 51009 NM_028443 73121 Mm.296138 NM_028443 ENSMUSG00000037962 Rflna 3110032G18Rik|Fam101a|cfm|cfm2 refilin A protein-coding unique_peak2_15_78_-0.00752748505193512_6.30001700565114_0.302413108461692-2 chr1 133129319 133129981 + 0.302413108461692 NA Intergenic Intergenic -1516 NM_133819 108954 Mm.293628 NM_133819 ENSMUSG00000046062 Ppp1r15b 1810033K10Rik|AI606441|C530022L24Rik|CReP protein phosphatase 1, regulatory (inhibitor) subunit 15b protein-coding unique_peak2_15_78_-0.00752748505193512_6.30001700565114_0.302413108461692 chr1 80374784 80375421 + 0.302413108461692 NA Intergenic Intergenic -34412 NM_016716 26554 Mm.12665 NM_016716 ENSMUSG00000004364 Cul3 KIAA0617 cullin 3 protein-coding common_peak2_95_705_0.00347571719362705_9.46526223186799_0.302413100148498 chr15 77928195 77929810 + 0.302413100148498 NA promoter-TSS (NM_019913) promoter-TSS (NM_019913) -8 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding common_peak2_95_711_-0.0087333405015908_9.4713667607156_0.302407251918201 chr11 117986249 117987862 + 0.302407251918201 NA intron (NM_133757, intron 1 of 9) CpG 198 NM_133757 74451 Mm.28864 NM_133757 ENSMUSG00000017715 Pgs1 2610019F11Rik|4933424M23Rik|SAF phosphatidylglycerophosphate synthase 1 protein-coding common_peak2_95_711_-0.0087333405015908_9.4713667607156_0.302407251918201-2 chr9 120570837 120572595 + 0.302407251918201 NA intron (NM_025974, intron 1 of 5) CpG 199 NM_025974 67115 Mm.289810 NM_025974 ENSMUSG00000025794 Rpl14 3100001N19Rik|AA407502|AL022816|CAG-ISL-7|CTG-B33|L14 ribosomal protein L14 protein-coding common_peak2_153_1260_0.00298129163120286_10.3018432061438_0.302406523917803 chr9 63398359 63400188 + 0.302406523917803 NA promoter-TSS (NM_027090) promoter-TSS (NM_027090) -29 NM_027090 69478 Mm.113942 NM_027090 ENSMUSG00000032403 2300009A05Rik - RIKEN cDNA 2300009A05 gene protein-coding common_peak1_49_316_0.00428847318333325_8.31048326673107_0.302400012074928 chr1 127345173 127345864 + 0.302400012074928 NA intron (NM_145128, intron 4 of 17) intron (NM_145128, intron 4 of 17) 140532 NM_145128 107895 Mm.214682 NM_145128 ENSMUSG00000036155 Mgat5 4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV mannoside acetylglucosaminyltransferase 5 protein-coding unique_peak2_15_80_-0.0435967397594563_6.3180516330049_0.302395710585543 chr14 20660831 20661606 + 0.302395710585543 NA exon (NM_175132, exon 4 of 4) exon (NM_175132, exon 4 of 4) 3356 NM_001310432 68760 Mm.35789 NM_175132 ENSMUSG00000039376 Synpo2l 1110054M18Rik|Chap synaptopodin 2-like protein-coding common_peak1_15_80_-0.0435967397594563_6.3180516330049_0.302395710585543-2 chr17 32281686 32282066 + 0.302395710585543 NA intron (NM_020508, intron 1 of 19) B3|SINE|B2 2247 NM_198094 57261 Mm.253518 NM_020508 ENSMUSG00000024002 Brd4 Brd5|HUNK1|MCAP|WI-11513 bromodomain containing 4 protein-coding common_peak1_15_80_-0.0435967397594563_6.3180516330049_0.302395710585543 chr10 19933512 19933869 + 0.302395710585543 NA promoter-TSS (NM_008580) promoter-TSS (NM_008580) -836 NM_008580 26408 Mm.6595 NM_008580 ENSMUSG00000071369 Map3k5 7420452D20Rik|ASK|ASK1|MAPKKK5|Mekk5 mitogen-activated protein kinase kinase kinase 5 protein-coding unique_peak2_15_80_-0.0435967397594563_6.3180516330049_0.302395710585543-3 chr2 75763484 75764232 + 0.302395710585543 NA Intergenic Intergenic -59195 NM_010902 18024 Mm.1025 NM_010902 ENSMUSG00000015839 Nfe2l2 Nrf2 nuclear factor, erythroid derived 2, like 2 protein-coding unique_peak2_15_80_-0.0435967397594563_6.3180516330049_0.302395710585543-2 chr17 5007359 5007894 + 0.302395710585543 NA intron (NM_001085355, intron 1 of 19) intron (NM_001085355, intron 1 of 19) 12552 NM_001085355 239985 Mm.133401 NM_001085355 ENSMUSG00000069729 Arid1b 8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235 AT rich interactive domain 1B (SWI-like) protein-coding unique_peak2_15_80_-0.0435967397594563_6.3180516330049_0.302395710585543-4 chr6 99884231 99884914 + 0.302395710585543 NA Intergenic Intergenic -158180 NM_001170419 50501 Mm.87365 NM_015768 ENSMUSG00000030069 Prok2 Bv8|PK2|Prok1 prokineticin 2 protein-coding common_peak1_15_80_-0.0435967397594563_6.3180516330049_0.302395710585543-3 chr5 33521073 33521481 + 0.302395710585543 NA Intergenic Intergenic -87187 NM_011320 672284 NM_011320 ENSMUSG00000029112 Nkx1-1 Nkx-1.1|Sax2 NK1 transcription factor related, locus 1 (Drosophila) protein-coding common_peak2_154_1278_-0.00601275726901029_10.3177941702471_0.302391420929681 chr13 111490209 111491337 + 0.302391420929681 NA promoter-TSS (NM_001122963) promoter-TSS (NM_001122963) -732 NM_001122963 73274 Mm.57286 NM_028487 ENSMUSG00000032745 Gpbp1 1700034P14Rik|AU019836|D230035M11Rik|Gpbp|mGPBP GC-rich promoter binding protein 1 protein-coding common_peak1_50_328_-0.0142729966077848_8.35480727543135_0.302358115415759 chr1 132341250 132341863 + 0.302358115415759 NA Intergenic B1_Mur4|SINE|Alu 25431 NM_001195025 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak2_98_738_-0.00797609033198654_9.52544250898016_0.302356761801051 chr4 135492954 135495082 + 0.302356761801051 NA intron (NM_028995, intron 1 of 11) intron (NM_028995, intron 1 of 11) 486 NM_028995 74552 Mm.26548 NM_028995 ENSMUSG00000028803 Nipal3 9130020G22Rik|AI480660|Npal3 NIPA-like domain containing 3 protein-coding common_peak1_100_756_-0.00730129638027499_9.5604988417956_0.302325109286208 chr14 55721525 55722968 + 0.302325109286208 NA promoter-TSS (NM_019519) promoter-TSS (NM_019519) -70 NM_019519 56187 Mm.87216 NM_019519 ENSMUSG00000040472 Rabggta gm Rab geranylgeranyl transferase, a subunit protein-coding common_peak1_16_84_-0.00585467516352978_6.40646359855594_0.302314898078895-5 chr4 63410885 63411289 + 0.302314898078895 NA Intergenic Intergenic -7642 NM_001045514 100182 Mm.387725 NM_001045514 ENSMUSG00000039158 Akna AI597013 AT-hook transcription factor protein-coding common_peak1_16_84_-0.00585467516352978_6.40646359855594_0.302314898078895-4 chr12 26459810 26460248 + 0.302314898078895 NA Intergenic Intergenic -3577 NM_021384 58185 Mm.24045 NM_021384 ENSMUSG00000020641 Rsad2 2510004L01Rik|Vig1|cig5 radical S-adenosyl methionine domain containing 2 protein-coding common_peak1_16_84_-0.00585467516352978_6.40646359855594_0.302314898078895 chr1 43144609 43144913 + 0.302314898078895 NA intron (NM_001289533, intron 2 of 5) intron (NM_001289533, intron 2 of 5) 19200 NM_010212 14200 Mm.6799 NM_010212 ENSMUSG00000008136 Fhl2 FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding unique_peak2_16_84_-0.00585467516352978_6.40646359855594_0.302314898078895 chr17 88702940 88703904 + 0.302314898078895 NA intron (NM_023630, intron 6 of 8) intron (NM_023630, intron 6 of 8) 34762 NM_023630 71828 Mm.61330 NM_023630 ENSMUSG00000024154 Gtf2a1l 1700011N16Rik|Alf|Gtf2a1lf general transcription factor IIA, 1-like protein-coding common_peak1_16_84_-0.00585467516352978_6.40646359855594_0.302314898078895-2 chr1 131245274 131245736 + 0.302314898078895 NA promoter-TSS (NM_001313731) promoter-TSS (NM_001313731) -327 NM_001313731 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak1_16_84_-0.00585467516352978_6.40646359855594_0.302314898078895-3 chr11 55025094 55025508 + 0.302314898078895 NA intron (NM_013472, intron 1 of 25) B3|SINE|B2 8170 NM_001110211 11749 Mm.265347 NM_013472 ENSMUSG00000018340 Anxa6 AW107198|Anx6|AnxVI|Cabm|Camb annexin A6 protein-coding common_peak2_101_765_-0.00691749361114447_9.57774183511938_0.302309842701638 chr16 13818342 13820092 + 0.302309842701638 NA promoter-TSS (NM_010946) promoter-TSS (NM_010946) -60 NM_010946 18203 Mm.380410 NM_010946 ENSMUSG00000022681 Ntan1 PNAA|PNAD N-terminal Asn amidase protein-coding common_peak1_52_339_0.00635082930540953_8.41256635079041_0.302307334217416 chr11 54973546 54974659 + 0.302307334217416 NA Intergenic Intergenic -11162 NM_001271455 57783 Mm.259671 NM_021327 ENSMUSG00000020400 Tnip1 ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN TNFAIP3 interacting protein 1 protein-coding common_peak1_16_86_-0.039407234874556_6.42323987841145_0.302299869808136-3 chr8 77483347 77483753 + 0.302299869808136 NA intron (NM_030113, intron 1 of 22) intron (NM_030113, intron 1 of 22) -33506 NR_028125 70345 Mm.411813 NR_028125 ENSMUSG00000097882 0610038B21Rik - RIKEN cDNA 0610038B21 gene ncRNA common_peak1_16_86_-0.039407234874556_6.42323987841145_0.302299869808136-2 chr14 25514171 25514568 + 0.302299869808136 NA intron (NM_001310666, intron 2 of 23) intron (NM_001310666, intron 2 of 23) -20070 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_16_86_-0.039407234874556_6.42323987841145_0.302299869808136 chr1 30891903 30892639 + 0.302299869808136 NA Intergenic ORR1F|LTR|ERVL-MaLR -29015 NM_001081080 213109 Mm.194486 NM_025871 ENSMUSG00000048874 Phf3 2310061N19Rik|mKIAA0244 PHD finger protein 3 protein-coding common_peak1_16_86_-0.039407234874556_6.42323987841145_0.302299869808136 chr13 94979115 94979551 + 0.302299869808136 NA intron (NM_172590, intron 2 of 12) intron (NM_172590, intron 2 of 12) 2989 NM_172590 218460 Mm.33856 NM_172590 ENSMUSG00000042015 Wdr41 B830029I03Rik|MSTP048 WD repeat domain 41 protein-coding common_peak2_165_1381_0.00357627996644538_10.4343300403715_0.302286090048297 chr2 180966255 180968061 + 0.302286090048297 NA promoter-TSS (NM_001177707) promoter-TSS (NM_001177707) -67 NM_145760 228998 Mm.33765 NM_145760 ENSMUSG00000027575 Arfgap1 AI115377|Arf1gap ADP-ribosylation factor GTPase activating protein 1 protein-coding common_peak1_103_778_0.0031663489519751_9.60706269253766_0.302283572556017 chr11 73136560 73138112 + 0.302283572556017 NA exon (NM_010353, exon 1 of 1) exon (NM_010353, exon 1 of 1) 958 NM_010353 14841 Mm.42045 NM_010353 ENSMUSG00000050107 Gsg2 Haspin germ cell associated 2, haspin protein-coding common_peak1_103_778_0.0031663489519751_9.60706269253766_0.302283572556017-2 chr5 145190778 145192219 + 0.302283572556017 NA promoter-TSS (NM_020582) promoter-TSS (NM_020582) 94 NM_020582 57423 Mm.133551 NM_020582 ENSMUSG00000038690 Atp5j2 1110019H14Rik ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2 protein-coding common_peak2_103_784_-0.00790297676534557_9.61259735539632_0.30227876650503 chr9 122804840 122806507 + 0.30227876650503 NA 5' UTR (NM_001013405, exon 1 of 11) 5' UTR (NM_001013405, exon 1 of 11) 126 NM_001013405 382117 Mm.215892 NM_001013405 ENSMUSG00000046603 Tcaim D9Ertd402e|Gm1129|TOAG-1 T cell activation inhibitor, mitochondrial protein-coding common_peak1_53_347_0.00587638217722208_8.44588168693734_0.302277970030655 chr9 121926748 121927733 + 0.302277970030655 NA Intergenic ORR1G|LTR|ERVL-MaLR -10035 NR_033553 69430 Mm.482910 NR_033553 ENSMUSG00000043773 1700048O20Rik 1700022O21Rik RIKEN cDNA 1700048O20 gene ncRNA common_peak2_323_3141_0.00209924007139506_11.6185170853299_0.302273205250884 chr13 113058686 113066140 + 0.302273205250884 NA intron (NM_001281487, intron 4 of 11) intron (NM_001281487, intron 4 of 11) -16025 NM_027127 69590 Mm.12715 NM_027127 ENSMUSG00000021760 Gpx8 2310016C16Rik|AU017063 glutathione peroxidase 8 (putative) protein-coding common_peak2_104_793_-0.00741496646613804_9.62928771390989_0.302264566944845 chr3 86223571 86225422 + 0.302264566944845 NA promoter-TSS (NM_030695) promoter-TSS (NM_030695) -194 NM_001077688 80877 Mm.439825 NM_030695 ENSMUSG00000028080 Lrba C80285|D3Ertd775e|Lab300|Lba LPS-responsive beige-like anchor protein-coding common_peak1_54_355_0.00555758741951706_8.47851222467616_0.302249925588236 chr2 69885119 69886080 + 0.302249925588236 NA promoter-TSS (NR_110977) promoter-TSS (NR_110977) 16 NM_029280 75422 Mm.10508 NM_029280 ENSMUSG00000051730 Mettl5 2810410A08Rik methyltransferase like 5 protein-coding common_peak1_54_355_0.00555758741951706_8.47851222467616_0.302249925588236-2 chr9 73089246 73090281 + 0.302249925588236 NA intron (NM_023635, intron 5 of 5) intron (NM_023635, intron 5 of 5) -12635 NM_025890 66991 Mm.471745 NM_025890 ENSMUSG00000092622 Khdc3 2410004A20Rik|AI467128|FILIA|OEEP48 KH domain containing 3, subcortical maternal complex member protein-coding common_peak1_54_355_0.00555758741951706_8.47851222467616_0.302249925588236-3 chr9 107629434 107630387 + 0.302249925588236 NA intron (NM_008138, intron 1 of 8) intron (NM_008138, intron 1 of 8) 5432 NM_008138 14678 Mm.196464 NM_008138 ENSMUSG00000032562 Gnai2 C76432|Galphai2|Gia|Gnai-2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 protein-coding common_peak1_169_1422_0.00353421251236519_10.4764870527827_0.302249924384385 chr12 25154375 25155733 + 0.302249924384385 NA Intergenic Intergenic 25880 NR_045844 432641 Mm.112955 NR_045844 Gm17746 - predicted gene, 17746 ncRNA common_peak1_54_359_-0.0105620779437583_8.48657205735779_0.30224311031937 chr2 30699971 30700707 + 0.30224311031937 NA Intergenic ID_B1|SINE|B4 -20871 NR_037272 100526499 NR_037272 ENSMUSG00000093091 Mir3089 mir-3089|mmu-mir-3089 microRNA 3089 ncRNA common_peak2_17_90_-0.00310927832602914_6.50624000103568_0.302229710280872 chr4 117251863 117252468 + 0.302229710280872 NA promoter-TSS (NM_001033774) promoter-TSS (NM_001033774) -175 NM_029589 68777 Mm.331805 NM_026837 ENSMUSG00000048772 Tmem53 1110038M16Rik|1500001P22Rik|1700012A05Rik transmembrane protein 53 protein-coding common_peak1_17_90_-0.00310927832602914_6.50624000103568_0.302229710280872-3 chr5 86071306 86071638 + 0.302229710280872 NA promoter-TSS (NM_019992) promoter-TSS (NM_019992) -274 NM_019992 56792 Mm.131237 NM_019992 ENSMUSG00000029254 Stap1 AI586015|Brdg1|STAP-1 signal transducing adaptor family member 1 protein-coding common_peak1_17_90_-0.00310927832602914_6.50624000103568_0.302229710280872-2 chr4 148625440 148625887 + 0.302229710280872 NA intron (NR_131120, intron 1 of 7) B2_Mm1a|SINE|B2 1333 NR_027864 230908 Mm.22453 NM_145556 ENSMUSG00000041459 Tardbp 1190002A23Rik|C85084|TDP-43|Tdp43 TAR DNA binding protein protein-coding unique_peak2_17_90_-0.00310927832602914_6.50624000103568_0.302229710280872 chr13 32971069 32971750 + 0.302229710280872 NA intron (NM_011454, intron 2 of 6) intron (NM_011454, intron 2 of 6) 5896 NM_011454 20708 Mm.36526 NM_011454 ENSMUSG00000042842 Serpinb6b NK13|Spi12|ovalbumin serine (or cysteine) peptidase inhibitor, clade B, member 6b protein-coding common_peak1_17_90_-0.00310927832602914_6.50624000103568_0.302229710280872 chr4 115000213 115000503 + 0.302229710280872 NA intron (NM_001304551, intron 1 of 15) CpG 240 NM_001304555 20460 Mm.3988 NM_009185 ENSMUSG00000028718 Stil Sil Scl/Tal1 interrupting locus protein-coding unique_peak2_17_92_-0.0344734492353638_6.52192208649035_0.302216598514532-4 chr9 114778286 114779081 + 0.302216598514532 NA intron (NM_001252479, intron 1 of 3) IMPB_01|Satellite|Satellite 3310 NM_133978 102545 Mm.35600 NM_133978 ENSMUSG00000032436 Cmtm7 AI481279|Cklfsf7|LNV CKLF-like MARVEL transmembrane domain containing 7 protein-coding unique_peak2_17_92_-0.0344734492353638_6.52192208649035_0.302216598514532-3 chr5 96891517 96892340 + 0.302216598514532 NA Intergenic Intergenic -29344 NR_131152 666266 Mm.32442 NR_131152 ENSMUSG00000106357 Gm8013 EG666266 predicted gene 8013 ncRNA common_peak1_17_92_-0.0344734492353638_6.52192208649035_0.302216598514532 chr12 84222415 84222906 + 0.302216598514532 NA Intergenic Intergenic -3779 NM_001163501 238317 Mm.31256 NM_001163501 ENSMUSG00000042507 Elmsan1 9430029N19Rik|C130039O16Rik|Gm260 ELM2 and Myb/SANT-like domain containing 1 protein-coding common_peak1_17_92_-0.0344734492353638_6.52192208649035_0.302216598514532-4 chr7 84151637 84152138 + 0.302216598514532 NA promoter-TSS (NM_133722) promoter-TSS (NM_133722) 6 NM_133722 70178 Mm.23914 NM_133722 ENSMUSG00000038459 Abhd17c 2210412D01Rik|AL023007|Fam108c|Fam108c1 abhydrolase domain containing 17C protein-coding unique_peak2_17_92_-0.0344734492353638_6.52192208649035_0.302216598514532-2 chr4 141207392 141207966 + 0.302216598514532 NA Intergenic IAPLTR2_Mm|LTR|ERVK -6277 NM_001081174 76166 Mm.271064 NM_001081174 ENSMUSG00000073733 Rsg1 6330545A04Rik|Gm723 REM2 and RAB-like small GTPase 1 protein-coding common_peak1_17_92_-0.0344734492353638_6.52192208649035_0.302216598514532-3 chr4 63846592 63847092 + 0.302216598514532 NA intron (NM_009403, intron 2 of 3) intron (NM_009403, intron 2 of 3) 14442 NM_009403 21949 Mm.4664 NM_009403 ENSMUSG00000028362 Tnfsf8 CD153|CD30LG|Cd30l|Tnlg3a tumor necrosis factor (ligand) superfamily, member 8 protein-coding common_peak1_17_92_-0.0344734492353638_6.52192208649035_0.302216598514532-2 chr3 84680382 84680838 + 0.302216598514532 NA intron (NM_177260, intron 1 of 6) intron (NM_177260, intron 1 of 6) 14418 NM_177260 320782 Mm.107370 NM_177260 ENSMUSG00000056498 Tmem154 9930117H01Rik transmembrane protein 154 protein-coding unique_peak2_17_92_-0.0344734492353638_6.52192208649035_0.302216598514532 chr3 68869392 68870252 + 0.302216598514532 NA exon (NM_001167996, exon 1 of 1) exon (NM_001167996, exon 1 of 1) 236 NM_001167996 68725 Mm.45741 NM_001167996 ENSMUSG00000046999 1110032F04Rik AI115547 RIKEN cDNA 1110032F04 gene protein-coding common_peak2_55_367_-0.0103848948527308_8.51836950863065_0.302216594085427-2 chr19 53197947 53199687 + 0.302216594085427 NA intron (NM_013758, intron 1 of 15) intron (NM_013758, intron 1 of 15) 54820 NM_013758 27360 Mm.426080 NM_013758 ENSMUSG00000025026 Add3 AI463285|R75380 adducin 3 (gamma) protein-coding common_peak2_55_367_-0.0103848948527308_8.51836950863065_0.302216594085427 chr19 11571062 11572545 + 0.302216594085427 NA Intergenic Intergenic 33001 NM_026835 68774 Mm.290390 NM_026835 ENSMUSG00000024679 Ms4a6d 1110058E16Rik|AI447446|Ms4a11 membrane-spanning 4-domains, subfamily A, member 6D protein-coding common_peak1_175_1492_-0.00436377388152209_10.5418165631938_0.302195887240264 chr6 7844670 7846082 + 0.302195887240264 NA 5' UTR (NM_052993, exon 1 of 4) 5' UTR (NM_052993, exon 1 of 4) 152 NM_052993 94192 Mm.102752 NM_052993 ENSMUSG00000042460 C1galt1 2210410E06Rik|AV284120|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 protein-coding common_peak1_56_375_-0.0100901321274645_8.54954378561391_0.302191212239757 chr5 136116681 136117259 + 0.302191212239757 NA intron (NM_011293, intron 1 of 3) CpG 279 NM_011293 20022 Mm.4896 NM_011293 ENSMUSG00000039771 Polr2j 14.5kDa|Polr2i|Rpb11a|Rpo2-4 polymerase (RNA) II (DNA directed) polypeptide J protein-coding common_peak1_110_843_0.00281897865751013_9.72250867803594_0.302187086366327 chr19 42170147 42171334 + 0.302187086366327 NA 5' UTR (NM_177319, exon 1 of 13) 5' UTR (NM_177319, exon 1 of 13) 173 NM_001164531 319740 Mm.287359 NM_177319 ENSMUSG00000018820 Zfyve27 2210011N02Rik|9530077C24Rik|AI426636|AI593546|AI835681 zinc finger, FYVE domain containing 27 protein-coding common_peak2_111_852_0.00338744107234668_9.73809565185447_0.302174885045316 chr11 93955093 93956825 + 0.302174885045316 NA promoter-TSS (NM_001077529) promoter-TSS (NM_001077529) -176 NM_001077529 18103 Mm.1260 NM_008705 ENSMUSG00000020857 Nme2 NM23-H2|NM23B|nm23-M2 NME/NM23 nucleoside diphosphate kinase 2 protein-coding common_peak2_111_858_-0.00672494874782537_9.74315184676455_0.302170874921398 chr3 94886140 94887510 + 0.302170874921398 NA exon (NM_008945, exon 1 of 7) exon (NM_008945, exon 1 of 7) 133 NM_008945 19172 Mm.368 NM_008945 ENSMUSG00000005779 Psmb4 Pros-27 proteasome (prosome, macropain) subunit, beta type 4 protein-coding common_peak2_57_383_-0.00968687502223098_8.58011906321004_0.302166893512061 chr5 117388071 117389266 + 0.302166893512061 NA intron (NM_028128, intron 1 of 10) CpG 355 NM_028128 72151 Mm.27997 NM_028128 ENSMUSG00000029363 Rfc5 2610020K06Rik|2610209F07Rik|36.5kDa|36kDa|Recc5 replication factor C (activator 1) 5 protein-coding common_peak2_180_1537_0.00236752751453473_10.5880235517191_0.302158766565579 chr15 34442303 34444564 + 0.302158766565579 NA promoter-TSS (NR_028101) promoter-TSS (NR_028101) -157 NM_001163485 19946 Mm.358632 NM_009083 ENSMUSG00000058600 Rpl30 - ribosomal protein L30 protein-coding common_peak1_18_96_0.000451361209762524_6.60013852279201_0.302155115936312-3 chr4 135150161 135150668 + 0.302155115936312 NA intron (NM_019732, intron 1 of 5) intron (NM_019732, intron 1 of 5) 29769 NM_019732 12399 Mm.378894 NM_019732 ENSMUSG00000070691 Runx3 AML2|Cbfa3|Pebp2a3 runt related transcription factor 3 protein-coding common_peak1_18_96_0.000451361209762524_6.60013852279201_0.302155115936312 chr17 36167894 36168421 + 0.302155115936312 NA exon (NM_001081032, exon 2 of 8) exon (NM_001081032, exon 2 of 8) 380 NM_001081032 667977 Mm.441651 NM_001081032 ENSMUSG00000073402 Gm8909 EG667977|H2-Tw5l|H2-gs17 predicted gene 8909 protein-coding common_peak1_18_96_0.000451361209762524_6.60013852279201_0.302155115936312-2 chr4 32351663 32352195 + 0.302155115936312 NA Intergenic MER119|DNA|hAT-Charlie -65506 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding unique_peak2_18_96_0.000451361209762524_6.60013852279201_0.302155115936312 chr10 118765554 118766359 + 0.302155115936312 NA Intergenic Intergenic 102947 NM_001014390 69181 Mm.45565 NM_001014390 ENSMUSG00000028630 Dyrk2 1810038L18Rik dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein-coding common_peak1_113_871_0.00292670595960409_9.76964767775673_0.302149953332056 chr10 128565314 128566684 + 0.302149953332056 NA promoter-TSS (NM_011119) promoter-TSS (NM_011119) -65 NM_011119 18813 Mm.4742 NM_011119 ENSMUSG00000025364 Pa2g4 38kDa|AA672939|Ebp1|Plfap proliferation-associated 2G4 protein-coding common_peak2_181_1555_-0.00466899107978946_10.6012918494463_0.302148590903648 chr19 56396210 56398678 + 0.302148590903648 NA intron (NM_007611, intron 1 of 6) CpG 315 NM_007611 12369 Mm.35687 NM_007611 ENSMUSG00000025076 Casp7 AI314680|CMH-1|ICE-IAP3|Mch3|caspase-7|mCASP-7 caspase 7 protein-coding common_peak1_18_98_-0.0289924166827191_6.61486041173825_0.302143576139525-2 chr4 106908613 106909063 + 0.302143576139525 NA Intergenic L2c|LINE|L2 -2632 NM_198438 72475 Mm.195635 NM_023672 ENSMUSG00000061887 Ssbp3 2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1 single-stranded DNA binding protein 3 protein-coding common_peak2_18_98_-0.0289924166827191_6.61486041173825_0.302143576139525 chr9 72678490 72679062 + 0.302143576139525 NA intron (NM_010890, intron 5 of 28) intron (NM_010890, intron 5 of 28) 16429 NM_010890 17999 Mm.279923 NM_010890 ENSMUSG00000032216 Nedd4 AA959633|AL023035|AU019897|E430025J12Rik|Nedd4-1|Nedd4a|mKIAA0093 neural precursor cell expressed, developmentally down-regulated 4 protein-coding common_peak1_18_98_-0.0289924166827191_6.61486041173825_0.302143576139525 chr2 33908744 33909269 + 0.302143576139525 NA Intergenic ID_B1|SINE|B4 -21060 NM_175184 72543 Mm.254914 NM_175184 ENSMUSG00000038740 Mvb12b 2610200O14Rik|2610528K11Rik|AI414895|Fam125b multivesicular body subunit 12B protein-coding common_peak1_18_98_-0.0289924166827191_6.61486041173825_0.302143576139525-3 chr5 133842306 133842623 + 0.302143576139525 NA Intergenic Intergenic -257284 NM_030719 80909 Mm.45218 NM_030719 ENSMUSG00000015944 Gatsl2 7530428J21Rik|AW742413|Gats|Gatsl1 GATS protein-like 2 protein-coding common_peak2_60_404_0.0027413532749847_8.66314877440948_0.30210232880806 chr2 69884897 69886356 + 0.30210232880806 NA promoter-TSS (NR_110977) promoter-TSS (NR_110977) -11 NR_110977 75422 Mm.10508 NM_029280 ENSMUSG00000051730 Mettl5 2810410A08Rik methyltransferase like 5 protein-coding common_peak1_188_1620_0.00307530058752548_10.6642060258113_0.302101005753788 chr2 121169901 121171838 + 0.302101005753788 NA promoter-TSS (NM_153387) promoter-TSS (NM_153387) 256 NM_001290819 99334 Mm.188422 NM_178889 ENSMUSG00000050619 Zscan29 AW125441|Zfp690 zinc finger SCAN domains 29 protein-coding common_peak1_60_408_-0.0114375818947767_8.67023824199436_0.302097059346754 chr8 36248450 36249331 + 0.302097059346754 NA exon (NM_001081150, exon 1 of 12) exon (NM_001081150, exon 1 of 12) 626 NM_001081150 244421 Mm.324032 NM_001081150 ENSMUSG00000039633 Lonrf1 - LON peptidase N-terminal domain and ring finger 1 protein-coding unique_peak2_19_102_0.00463370044755784_6.688817377407_0.302089254698767-3 chr4 137342675 137343742 + 0.302089254698767 NA intron (NM_001243769, intron 1 of 5) MTC-int|LTR|ERVL-MaLR 14551 NM_009861 12540 Mm.1022 NM_009861 ENSMUSG00000006699 Cdc42 AI747189|AU018915 cell division cycle 42 protein-coding unique_peak2_19_102_0.00463370044755784_6.688817377407_0.302089254698767-2 chr11 106419554 106420631 + 0.302089254698767 NA exon (NM_023913, exon 9 of 22) exon (NM_023913, exon 9 of 22) -37451 NM_010494 15896 Mm.394 NM_010494 ENSMUSG00000001029 Icam2 CD102|Icam-2|Ly-60 intercellular adhesion molecule 2 protein-coding common_peak1_19_102_0.00463370044755784_6.688817377407_0.302089254698767 chr10 127143931 127144401 + 0.302089254698767 NA Intergenic Intergenic -20990 NR_045166 14421 Mm.386762 NM_008080 ENSMUSG00000006731 B4galnt1 4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2 beta-1,4-N-acetyl-galactosaminyl transferase 1 protein-coding unique_peak2_19_102_0.00463370044755784_6.688817377407_0.302089254698767-4 chr6 148637279 148638238 + 0.302089254698767 NA Intergenic MMVL30-int|LTR|ERV1 -23449 NR_045867 622319 Mm.491049 NM_001037912 ENSMUSG00000070995 Gm6313 EG622319 predicted gene 6313 ncRNA common_peak1_19_102_0.00463370044755784_6.688817377407_0.302089254698767-2 chr17 69415728 69416177 + 0.302089254698767 NA promoter-TSS (NR_026848) promoter-TSS (NR_026848) -495 NR_026848 77533 Mm.266592 NR_026848 C030034I22Rik - RIKEN cDNA C030034I22 gene ncRNA unique_peak2_19_102_0.00463370044755784_6.688817377407_0.302089254698767 chr10 80322861 80323824 + 0.302089254698767 NA intron (NM_008793, intron 11 of 14) CpG -2794 NM_025521 66374 Mm.383824 NM_025521 ENSMUSG00000020133 2310011J03Rik AI452186|AW545358 RIKEN cDNA 2310011J03 gene protein-coding common_peak1_61_412_0.0032965445012163_8.69164624367005_0.302081557180458 chr17 22866482 22867225 + 0.302081557180458 NA intron (NM_001110254, intron 1 of 4) intron (NM_001110254, intron 1 of 4) 281 NM_177358 240041 Mm.328828 NM_177358 ENSMUSG00000059142 Zfp945 A630033E08Rik|C730040L01Rik zinc finger protein 945 protein-coding common_peak2_19_104_-0.0231112900353461_6.70268987264845_0.30207902023203 chr5 112263567 112264315 + 0.30207902023203 NA intron (NM_001312895, intron 4 of 5) ID_B1|SINE|B4 8121 NM_001312893 12960 Mm.29488 NM_023695 ENSMUSG00000029343 Crybb1 3110006K12Rik|BB1CRY crystallin, beta B1 protein-coding common_peak1_19_104_-0.0231112900353461_6.70268987264845_0.30207902023203-3 chr9 116189034 116189441 + 0.30207902023203 NA Intergenic Intergenic -13874 NM_009371 21813 Mm.172346 NM_009371 ENSMUSG00000032440 Tgfbr2 1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII transforming growth factor, beta receptor II protein-coding common_peak1_19_104_-0.0231112900353461_6.70268987264845_0.30207902023203-2 chr17 33254731 33255264 + 0.30207902023203 NA intron (NM_029952, intron 1 of 3) intron (NM_029952, intron 1 of 3) 148 NM_029952 77652 Mm.460572 NM_029952 ENSMUSG00000094441 Zfp955a AI842447|Zfp883a zinc finger protein 955A protein-coding unique_peak2_19_104_-0.0231112900353461_6.70268987264845_0.30207902023203 chr5 144214763 144215674 + 0.30207902023203 NA intron (NM_027410, intron 5 of 24) intron (NM_027410, intron 5 of 24) 8360 NM_027410 70381 Mm.239412 NM_027410 ENSMUSG00000066621 Tecpr1 2210010N04Rik|mKIAA1358 tectonin beta-propeller repeat containing 1 protein-coding common_peak1_19_104_-0.0231112900353461_6.70268987264845_0.30207902023203 chr11 83665967 83666401 + 0.30207902023203 NA Intergenic Intergenic 3600 NM_013652 20303 Mm.244263 NM_013652 ENSMUSG00000018930 Ccl4 AT744.1|Act-2|MIP-1B|Mip1b|Scya4 chemokine (C-C motif) ligand 4 protein-coding common_peak1_61_416_-0.0106090575240003_8.69859904468266_0.302076489404245 chr1 21335905 21337004 + 0.302076489404245 NA Intergenic Intergenic -13223 NM_183322 368204 Mm.26006 NM_183322 ENSMUSG00000067750 Khdc1a AU014713|C88118|Ndg1 KH domain containing 1A protein-coding common_peak2_193_1681_-0.00401131570537849_10.7139563324025_0.302064646253007 chr6 145248905 145251129 + 0.302064646253007 NA promoter-TSS (NR_045598) promoter-TSS (NR_045598) 214 NM_021284 16653 Mm.383182 NM_021284 ENSMUSG00000030265 Kras AI929937|K-Ras|K-Ras 2|K-ras|Ki-ras|Kras-2|Kras2|c-K-ras|c-Ki-ras|p21B|ras Kirsten rat sarcoma viral oncogene homolog protein-coding common_peak1_122_962_-0.00581420662474841_9.90848488453108_0.302047343900415 chr17 80206325 80207498 + 0.302047343900415 NA intron (NR_036615, intron 1 of 8) CpG 394 NM_001195486 225027 Mm.292016 NM_146083 ENSMUSG00000024097 Srsf7 35kDa|9430065L19Rik|9G8|NX-96|Sfrs7 serine/arginine-rich splicing factor 7 protein-coding common_peak2_63_428_0.00464404799833495_8.74715586149871_0.302042338030212 chr7 114087269 114089137 + 0.302042338030212 NA intron (NM_025846, intron 1 of 5) intron (NM_025846, intron 1 of 5) 29578 NM_025846 66922 Mm.276572 NM_025846 ENSMUSG00000055723 Rras2 2610016H24Rik|C86394|TC21 related RAS viral (r-ras) oncogene 2 protein-coding common_peak1_197_1716_0.0023924509983857_10.7468705495013_0.302041158829429 chr11 97139134 97140941 + 0.302041158829429 NA intron (NM_198100, intron 6 of 8) intron (NM_198100, intron 6 of 8) 6382 NR_106094 102466822 NR_106094 ENSMUSG00000099286 Mir7235 Gm27986|mmu-mir-7235 microRNA 7235 ncRNA common_peak2_123_966_0.00253474763017714_9.91863945329193_0.302039983235139 chr11 78163862 78166582 + 0.302039983235139 NA TTS (NM_080849) TTS (NM_080849) 328 NM_009423 22032 Mm.390418 NM_009423 ENSMUSG00000017386 Traf4 A530032M13Rik|CART1|msp2 TNF receptor associated factor 4 protein-coding common_peak2_124_981_-0.00545843529998891_9.9368499966647_0.302027609718384 chr11 120624190 120625722 + 0.302027609718384 NA promoter-TSS (NM_153056) promoter-TSS (NM_153056) 46 NM_153056 209011 Mm.292957 NM_153056 ENSMUSG00000025138 Sirt7 - sirtuin 7 protein-coding unique_peak2_20_109_-0.00388506972616209_6.77941717866158_0.302021539022609 chr14 20845505 20846349 + 0.302021539022609 NA Intergenic Intergenic 9265 NM_008873 18792 Mm.4183 NM_008873 ENSMUSG00000021822 Plau u-PA|uPA plasminogen activator, urokinase protein-coding common_peak1_20_109_-0.00388506972616209_6.77941717866158_0.302021539022609-2 chr4 8720457 8720913 + 0.302021539022609 NA intron (NM_001277149, intron 1 of 37) intron (NM_001277149, intron 1 of 37) 30279 NM_001277149 320790 Mm.138792 NM_001033395 ENSMUSG00000041235 Chd7 A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis chromodomain helicase DNA binding protein 7 protein-coding unique_peak2_20_109_-0.00388506972616209_6.77941717866158_0.302021539022609-2 chr7 80866931 80867842 + 0.302021539022609 NA intron (NM_009553, intron 2 of 2) T-rich|Low_complexity|Low_complexity 5278 NM_009553 22691 Mm.358645 NM_009553 ENSMUSG00000038797 Zscan2 Zfp-29|Zfp29 zinc finger and SCAN domain containing 2 protein-coding common_peak1_20_109_-0.00388506972616209_6.77941717866158_0.302021539022609 chr11 70774098 70774558 + 0.302021539022609 NA Intergenic Intergenic 9881 NM_177565 193043 Mm.40966 NM_177565 ENSMUSG00000043602 Zfp3 AI854635|B230309J24|Fnp-1|Zfp-3 zinc finger protein 3 protein-coding common_peak1_20_109_-0.00388506972616209_6.77941717866158_0.302021539022609-3 chr5 64496501 64497005 + 0.302021539022609 NA Intergenic ID_B1|SINE|B4 19745 NR_045413 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA common_peak2_20_109_-0.00388506972616209_6.77941717866158_0.302021539022609 chr13 51716768 51717435 + 0.302021539022609 NA intron (NM_001281880, intron 7 of 16) intron (NM_001281880, intron 7 of 16) 65393 NM_029279 75420 Mm.275981 NM_029279 ENSMUSG00000035139 Secisbp2 2210413N07Rik|2810012K13Rik|SBP2 SECIS binding protein 2 protein-coding common_peak1_125_991_-0.00597483924873643_9.95120889076251_0.302017527709715 chr16 17110234 17111680 + 0.302017527709715 NA intron (NM_144954, intron 1 of 20) CpG 295 NM_001252445 66053 Mm.253614 NM_144954 ENSMUSG00000022771 Ppil2 0610009L05Rik|1700016N17Rik|4921520K19Rik|4930511F14Rik|AA589416|C130078A06Rik|CYC4 peptidylprolyl isomerase (cyclophilin)-like 2 protein-coding common_peak1_64_441_-0.0109880390585353_8.78240853986216_0.30201702942724 chr2 150567086 150568204 + 0.30201702942724 NA Intergenic Intergenic -2770 NM_009977 13011 Mm.12965 NM_009977 ENSMUSG00000068129 Cst7 Cmap cystatin F (leukocystatin) protein-coding common_peak1_20_111_-0.0298802782591059_6.79241478292805_0.302012565718108-2 chr8 105936583 105937102 + 0.302012565718108 NA intron (NM_013640, intron 5 of 7) intron (NM_013640, intron 5 of 7) 1550 NM_013640 19171 Mm.787 NM_013640 ENSMUSG00000031897 Psmb10 Mecl-1|Mecl1 proteasome (prosome, macropain) subunit, beta type 10 protein-coding common_peak2_20_111_-0.0298802782591059_6.79241478292805_0.302012565718108 chr2 11501312 11502074 + 0.302012565718108 NA exon (NM_001177756, exon 1 of 17) exon (NM_001177756, exon 1 of 17) 397 NM_001177754 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding common_peak1_20_111_-0.0298802782591059_6.79241478292805_0.302012565718108 chr12 73630318 73630832 + 0.302012565718108 NA intron (NM_001313977, intron 2 of 14) intron (NM_001313977, intron 2 of 14) 45779 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding unique_peak2_20_111_-0.0298802782591059_6.79241478292805_0.302012565718108 chr15 80814685 80815540 + 0.302012565718108 NA intron (NM_177124, intron 1 of 21) intron (NM_177124, intron 1 of 21) 16502 NM_177124 213988 Mm.131328 NM_144812 ENSMUSG00000047888 Tnrc6b 2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik trinucleotide repeat containing 6b protein-coding common_peak1_66_457_-0.00866008794722006_8.83487374412333_0.301982396607316 chr16 38402954 38404019 + 0.301982396607316 NA intron (NM_134102, intron 8 of 10) intron (NM_134102, intron 8 of 10) 29659 NM_134102 85031 Mm.279805 NM_134102 ENSMUSG00000002847 Pla1a AA986889|Ps-pla1|Pspla1 phospholipase A1 member A protein-coding common_peak2_66_457_-0.00866008794722006_8.83487374412333_0.301982396607316 chr4 124692786 124694111 + 0.301982396607316 NA exon (NM_026031, exon 1 of 8) exon (NM_026031, exon 1 of 8) 106 NM_026031 67205 Mm.259121 NM_026031 ENSMUSG00000028907 Utp11l 2700082D03Rik|CGI-94|Cgi94|Utp11 UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) protein-coding common_peak2_130_1039_-0.00528055118158122_10.0197275374377_0.301971839447934 chr11 104580985 104583886 + 0.301971839447934 NA intron (NM_010858, intron 4 of 8) B3A|SINE|B2 -20237 NR_130177 100415912 Mm.446786 NR_130177 Gm11665 Gm11664|OTTMUSG00000003182|OTTMUSG00000003183 predicted gene 11665 ncRNA common_peak1_21_115_0.00181674756637928_6.85888936891076_0.301970029946241-2 chr4 102608704 102609293 + 0.301970029946241 NA Intergenic MTE2a|LTR|ERVL-MaLR 19155 NM_001177981 18578 Mm.20181 NM_019840 ENSMUSG00000028525 Pde4b Dpde4|R74983|dunce phosphodiesterase 4B, cAMP specific protein-coding common_peak1_21_115_0.00181674756637928_6.85888936891076_0.301970029946241-4 chr6 54776223 54776696 + 0.301970029946241 NA Intergenic Intergenic -40457 NM_199143 387524 Mm.286149 NM_199143 ENSMUSG00000058446 Znrf2 1190002C14Rik|AU044205|D6Ertd365e zinc and ring finger 2 protein-coding common_peak1_21_115_0.00181674756637928_6.85888936891076_0.301970029946241-3 chr4 154878004 154878414 + 0.301970029946241 NA intron (NM_013783, intron 2 of 23) (GA)n|Simple_repeat|Simple_repeat 8624 NM_013783 27390 Mm.116944 NM_013783 ENSMUSG00000058183 Mmel1 Mell1|NEP2|NEPII|Nl1|SEP membrane metallo-endopeptidase-like 1 protein-coding common_peak1_21_115_0.00181674756637928_6.85888936891076_0.301970029946241 chr4 46421031 46421463 + 0.301970029946241 NA Intergenic Intergenic -17064 NM_053149 93966 Mm.25793 NM_053149 ENSMUSG00000028332 Hemgn 4921524M03Rik|AI317176|EDAG|Hgn|mNDR hemogen protein-coding common_peak2_67_462_0.00189250008664743_8.85581463330356_0.3019679974339 chr5 120137835 120139762 + 0.3019679974339 NA intron (NM_028762, intron 16 of 23) intron (NM_028762, intron 16 of 23) 465 NR_045793 100503427 Mm.446834 NR_045793 ENSMUSG00000097368 Gm10390 ENSMUSG00000072671 predicted gene 10390 ncRNA common_peak2_67_466_-0.0105178563627781_8.86201981152827_0.301963963011671 chr13 55570348 55571776 + 0.301963963011671 NA promoter-TSS (NM_145382) promoter-TSS (NM_145382) 58 NM_145382 212483 Mm.35661 NM_145382 ENSMUSG00000021495 Fam193b IRIZIO|Kiaa1931 family with sequence similarity 193, member B protein-coding unique_peak2_21_117_-0.0228453066678904_6.8712203960279_0.301961960932715-2 chr9 56497577 56498460 + 0.301961960932715 NA Intergenic Intergenic 79172 NM_025812 66867 Mm.150856 NM_025812 ENSMUSG00000032329 Hmg20a 1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf high mobility group 20A protein-coding common_peak1_21_117_-0.0228453066678904_6.8712203960279_0.301961960932715-3 chr2 27693283 27693794 + 0.301961960932715 NA intron (NM_011305, intron 1 of 9) intron (NM_011305, intron 1 of 9) -15754 NM_001290481 20181 Mm.24624 NM_011305 ENSMUSG00000015846 Rxra 9530071D11Rik|Nr2b1|RXRalpha1 retinoid X receptor alpha protein-coding common_peak1_21_117_-0.0228453066678904_6.8712203960279_0.301961960932715 chr10 80021085 80021536 + 0.301961960932715 NA intron (NM_001142701, intron 5 of 22) intron (NM_001142701, intron 5 of 22) 1635 NM_027521 70719 Mm.243954 NM_027521 ENSMUSG00000035697 Hmha1 6330406L22Rik|AW539505|Ha-1 histocompatibility (minor) HA-1 protein-coding unique_peak2_21_117_-0.0228453066678904_6.8712203960279_0.301961960932715 chr11 102697300 102698185 + 0.301961960932715 NA promoter-TSS (NM_025918) promoter-TSS (NM_025918) -17 NM_025918 52715 Mm.277638 NM_025918 ENSMUSG00000020925 Ccdc43 2610001E01Rik|D11Ertd707e coiled-coil domain containing 43 protein-coding common_peak1_21_117_-0.0228453066678904_6.8712203960279_0.301961960932715-5 chr9 54613008 54613509 + 0.301961960932715 NA intron (NM_053178, intron 11 of 13) intron (NM_053178, intron 11 of 13) 26747 NM_029573 67834 Mm.279195 NM_029573 ENSMUSG00000032279 Idh3a 1110003P10Rik|1500012E04Rik|AA407078|AI316514 isocitrate dehydrogenase 3 (NAD+) alpha protein-coding common_peak1_21_117_-0.0228453066678904_6.8712203960279_0.301961960932715-2 chr17 26932410 26932877 + 0.301961960932715 NA promoter-TSS (NM_009343) promoter-TSS (NM_009343) -484 NM_001302397 21652 Mm.258953 NM_009343 ENSMUSG00000024193 Phf1 AW557215|D17Ertd455e|Pcl1|Phf2|Tctex3 PHD finger protein 1 protein-coding common_peak2_21_117_-0.0228453066678904_6.8712203960279_0.301961960932715 chr9 63750464 63751605 + 0.301961960932715 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 6960 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding unique_peak2_21_117_-0.0228453066678904_6.8712203960279_0.301961960932715-3 chrX 152001332 152002472 + 0.301961960932715 NA promoter-TSS (NM_016763) promoter-TSS (NM_016763) 6 NM_016763 15108 Mm.6994 NM_016763 ENSMUSG00000025260 Hsd17b10 17bHSD10|Ads9|ERAB|Hadh2 hydroxysteroid (17-beta) dehydrogenase 10 protein-coding common_peak1_21_117_-0.0228453066678904_6.8712203960279_0.301961960932715-4 chr8 128644419 128644876 + 0.301961960932715 NA Intergenic Intergenic -41007 NM_010578 16412 Mm.263396 NM_010578 ENSMUSG00000025809 Itgb1 4633401G24Rik|AA409975|AA960159|CD29|ENSMUSG00000051907|Fnrb|Gm9863|gpIIa integrin beta 1 (fibronectin receptor beta) protein-coding common_peak1_21_117_-0.0228453066678904_6.8712203960279_0.301961960932715-6 chrX 144318088 144318472 + 0.301961960932715 NA intron (NR_037145, intron 1 of 26) CpG 314 NM_026247 67574 Mm.249084 NM_026247 ENSMUSG00000041718 Alg13 2810046O15Rik|4833435D08Rik|Glt28d1|MDS031|OTTMUSG00000018917 asparagine-linked glycosylation 13 protein-coding common_peak1_68_470_0.00301207063401066_8.88108928492979_0.30195206532012 chr7 100372218 100372948 + 0.30195206532012 NA promoter-TSS (NM_028292) promoter-TSS (NM_028292) 350 NM_001017985 277939 Mm.276374 NM_001017985 ENSMUSG00000047248 C2cd3 AU020772 C2 calcium-dependent domain containing 3 protein-coding unique_peak2_68_470_0.00301207063401066_8.88108928492979_0.30195206532012 chr2 37547416 37549954 + 0.30195206532012 NA intron (NM_146121, intron 19 of 25) intron (NM_146121, intron 19 of 25) 32059 NM_177383 338346 Mm.445325 NM_177383 ENSMUSG00000053164 Gpr21 C230004C13Rik G protein-coupled receptor 21 protein-coding common_peak2_68_470_0.00301207063401066_8.88108928492979_0.30195206532012 chr10 60080273 60081823 + 0.30195206532012 NA intron (NM_026937, intron 9 of 10) intron (NM_026937, intron 9 of 10) -25209 NM_052994 94214 Mm.153429 NM_052994 ENSMUSG00000058297 Spock2 AA407235|Gcap26|mKIAA0275 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 protein-coding common_peak1_215_1918_-0.00409449579671772_10.904091748297_0.301936664892995 chr15 98092459 98094243 + 0.301936664892995 NA 5' UTR (NM_144851, exon 1 of 18) 5' UTR (NM_144851, exon 1 of 18) 218 NM_144851 223870 Mm.384023 NM_144851 ENSMUSG00000033075 Senp1 2310046A20Rik|D15Ertd528e|E330036L07Rik|suPr-2 SUMO1/sentrin specific peptidase 1 protein-coding common_peak1_216_1920_0.00257651033424899_10.9089300588327_0.301933834498207 chr10 82629042 82630614 + 0.301933834498207 NA promoter-TSS (NM_172552) promoter-TSS (NM_172552) -10 NM_011561 21665 Mm.284252 NM_011561 ENSMUSG00000034674 Tdg E130317C12Rik|JZA-3|Jza1 thymine DNA glycosylase protein-coding common_peak2_70_487_0.00242220828413053_8.93194844170495_0.301919943995711 chr9 55937533 55938923 + 0.301919943995711 NA promoter-TSS (NM_001081341) promoter-TSS (NM_001081341) -113 NM_001081341 244891 Mm.86588 NM_175536 ENSMUSG00000034007 Scaper C430017I08|D530014O03Rik|Zfp291 S phase cyclin A-associated protein in the ER protein-coding common_peak1_22_122_-0.00405370124572979_6.94048765471637_0.301916313394054-3 chr2 101757818 101758328 + 0.301916313394054 NA intron (NM_175181, intron 4 of 8) Charlie1b|DNA|hAT-Charlie 39634 NM_175181 72446 Mm.24138 NM_175181 ENSMUSG00000032841 Prr5l 2600010E01Rik|4833411O04Rik|Protor-2|Protor2 proline rich 5 like protein-coding unique_peak2_22_122_-0.00405370124572979_6.94048765471637_0.301916313394054 chr3 60570498 60571634 + 0.301916313394054 NA intron (NM_001310514, intron 2 of 8) intron (NM_001310514, intron 2 of 8) 69887 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_22_122_-0.00405370124572979_6.94048765471637_0.301916313394054 chr17 33559950 33560419 + 0.301916313394054 NA intron (NM_053214, intron 1 of 27) intron (NM_053214, intron 1 of 27) 4477 NM_053214 17916 Mm.42019 NM_053214 ENSMUSG00000024300 Myo1f C330006B10Rik myosin IF protein-coding common_peak1_22_122_-0.00405370124572979_6.94048765471637_0.301916313394054-2 chr19 9038393 9038893 + 0.301916313394054 NA intron (NM_001039959, intron 5 of 5) L2b|LINE|L2 20739 NR_105786 102465190 NR_105786 ENSMUSG00000099308 Mir6367 Gm27467|mmu-mir-6367 microRNA 6367 ncRNA common_peak1_22_122_-0.00405370124572979_6.94048765471637_0.301916313394054-4 chr9 44153934 44154520 + 0.301916313394054 NA exon (NM_007619, exon 13 of 16) exon (NM_007619, exon 13 of 16) 19569 NM_023061 84004 Mm.275003 NM_023061 ENSMUSG00000032135 Mcam 1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin melanoma cell adhesion molecule protein-coding common_peak1_22_122_-0.00405370124572979_6.94048765471637_0.301916313394054-5 chr9 45274195 45274652 + 0.301916313394054 NA Intergenic Intergenic -5277 NM_008348 16154 Mm.379327 NM_008348 ENSMUSG00000032089 Il10ra AW553859|CDw210|CDw210a|IL-10R1|IL-10RA|Il10r|mIL-10R interleukin 10 receptor, alpha protein-coding common_peak1_70_491_-0.00935495949222265_8.93783702559313_0.301916311548372 chr1 128103254 128104142 + 0.301916311548372 NA promoter-TSS (NM_001285945) promoter-TSS (NM_001285945) 392 NM_181750 226412 Mm.221041 NM_181750 ENSMUSG00000056211 R3hdm1 R3hdm R3H domain containing 1 protein-coding common_peak1_137_1102_0.00199055584176833_10.1082123535123_0.301915508019255 chr15 78564115 78565577 + 0.301915508019255 NA intron (NM_009008, intron 5 of 6) intron (NM_009008, intron 5 of 6) 7937 NM_009008 19354 Mm.1972 NM_009008 ENSMUSG00000033220 Rac2 AI323801|AI452260 RAS-related C3 botulinum substrate 2 protein-coding common_peak2_22_124_-0.0273234805685769_6.9521225443778_0.301909136693007 chr1 36293850 36294632 + 0.301909136693007 NA Intergenic Intergenic -13492 NM_001290727 214855 Mm.34316 NM_145996 ENSMUSG00000037447 Arid5a D430024K22Rik|Mrf1 AT rich interactive domain 5A (MRF1-like) protein-coding unique_peak2_22_124_-0.0273234805685769_6.9521225443778_0.301909136693007 chr18 65409427 65410452 + 0.301909136693007 NA intron (NR_105742, intron 3 of 6) Lx8|LINE|L1 -16051 NM_001037294 225638 Mm.296528 NM_001037294 ENSMUSG00000032845 Alpk2 Gm549|Hak alpha-kinase 2 protein-coding common_peak1_22_124_-0.0273234805685769_6.9521225443778_0.301909136693007 chr15 36642666 36643204 + 0.301909136693007 NA Intergenic Intergenic -33962 NM_008774 18458 Mm.371570 NM_008774 ENSMUSG00000022283 Pabpc1 PABP|Pabp1|PabpI|Pabpl1|ePAB poly(A) binding protein, cytoplasmic 1 protein-coding common_peak2_71_499_-0.00787430041670767_8.96184713445373_0.301902073523019 chr1 176823276 176825123 + 0.301902073523019 NA intron (NM_029756, intron 1 of 17) LTR82A|LTR|ERVL 9539 NM_029756 76816 Mm.171399 NM_029756 ENSMUSG00000026504 Sdccag8 2700048G21Rik|5730470G24Rik|Cccap serologically defined colon cancer antigen 8 protein-coding common_peak2_139_1127_-0.00488101550254783_10.1371108446475_0.301898199016142 chr17 80205995 80207903 + 0.301898199016142 NA intron (NR_036615, intron 1 of 8) CpG 356 NM_001195486 225027 Mm.292016 NM_146083 ENSMUSG00000024097 Srsf7 35kDa|9430065L19Rik|9G8|NX-96|Sfrs7 serine/arginine-rich splicing factor 7 protein-coding common_peak2_224_2016_-0.00371114417001017_10.976139796528_0.301892546912363 chr3 88176592 88178823 + 0.301892546912363 NA promoter-TSS (NR_045997) promoter-TSS (NR_045997) 78 NR_045997 76642 Mm.424420 NR_045997 ENSMUSG00000096935 1700113A16Rik 2210408E11Rik|AA408983 RIKEN cDNA 1700113A16 gene ncRNA common_peak2_437_4560_-0.0020686011324873_12.1541001542915_0.301887720182542 chr18 39488049 39492228 + 0.301887720182542 NA Intergenic CpG -2893 NM_008173 14815 Mm.129481 NM_008173 ENSMUSG00000024431 Nr3c1 GR|Grl-1|Grl1 nuclear receptor subfamily 3, group C, member 1 protein-coding common_peak1_141_1141_0.00242492167052966_10.1585593961981_0.301885280447703 chr12 108892937 108894165 + 0.301885280447703 NA promoter-TSS (NM_177602) promoter-TSS (NM_177602) -340 NM_011710 22375 Mm.38433 NM_011710 ENSMUSG00000021266 Wars TrpRS|WRS tryptophanyl-tRNA synthetase protein-coding common_peak1_73_512_0.00358094679071286_9.00460548900241_0.301876574137378 chr5 123720106 123721156 + 0.301876574137378 NA intron (NM_027494, intron 1 of 13) CpG 413 NM_027494 70650 Mm.279427 NM_027494 ENSMUSG00000029427 Zcchc8 5730565F05Rik zinc finger, CCHC domain containing 8 protein-coding common_peak1_23_128_0.00254821266884075_7.01250136175767_0.301874928694689 chr12 17724131 17724698 + 0.301874928694689 NA intron (NM_016677, intron 1 of 3) intron (NM_016677, intron 1 of 3) 33600 NM_016677 53602 Mm.313619 NM_016677 ENSMUSG00000071379 Hpcal1 NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3 hippocalcin-like 1 protein-coding common_peak2_23_128_0.00254821266884075_7.01250136175767_0.301874928694689 chr15 34046284 34047196 + 0.301874928694689 NA Intergenic Intergenic -35979 NM_026002 67154 Mm.130883 NM_026002 ENSMUSG00000022255 Mtdh 2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric metadherin protein-coding common_peak1_143_1161_0.00212794202720623_10.1834583244181_0.301870565861875 chr4 133705625 133707277 + 0.301870565861875 NA intron (NM_001080819, intron 4 of 19) B1_Mur1|SINE|Alu 10657 NR_106086 102465707 NR_106086 ENSMUSG00000104566 Mir7227 mmu-mir-7227 microRNA 7227 ncRNA common_peak2_143_1161_0.00212794202720623_10.1834583244181_0.301870565861875-2 chr14 66239629 66243835 + 0.301870565861875 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -28180 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak2_143_1161_0.00212794202720623_10.1834583244181_0.301870565861875 chr14 26969468 26971355 + 0.301870565861875 NA exon (NM_145221, exon 1 of 22) exon (NM_145221, exon 1 of 22) 140 NM_145221 72993 Mm.202322 NM_145221 ENSMUSG00000040760 Appl1 2900057D21Rik|7330406P05Rik|AI585782|AW209077|BB022931|C88264|DIP13 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 protein-coding common_peak2_23_130_-0.0196475334453554_7.02359923481477_0.301868404082872 chr15 75616662 75617204 + 0.301868404082872 NA 5' UTR (NM_011759, exon 1 of 3) 5' UTR (NM_011759, exon 1 of 3) 249 NM_011759 22701 Mm.87210 NM_011759 ENSMUSG00000047003 Zfp41 CTfin92|Zfp-41 zinc finger protein 41 protein-coding common_peak1_23_130_-0.0196475334453554_7.02359923481477_0.301868404082872 chr11 11727267 11727921 + 0.301868404082872 NA intron (NM_001301866, intron 3 of 5) B2_Mm2|SINE|B2 37417 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak1_23_130_-0.0196475334453554_7.02359923481477_0.301868404082872-2 chr7 105739259 105739934 + 0.301868404082872 NA intron (NM_001161724, intron 2 of 12) intron (NM_001161724, intron 2 of 12) -2211 NM_133951 101867 Mm.231400 NM_025897 ENSMUSG00000030888 Rrp8 1500003O22Rik|2900001K19Rik|AW538116 ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding unique_peak2_23_130_-0.0196475334453554_7.02359923481477_0.301868404082872 chr3 60512818 60513776 + 0.301868404082872 NA intron (NM_001253709, intron 1 of 8) intron (NM_001253709, intron 1 of 8) 12118 NM_001253708 56758 Mm.255723 NM_020007 ENSMUSG00000027763 Mbnl1 Mbnl|mKIAA0428 muscleblind-like 1 (Drosophila) protein-coding common_peak1_235_2129_0.00211331230133815_11.0576943712639_0.301845189555549 chr10 93324863 93327376 + 0.301845189555549 NA Intergenic Intergenic -10113 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak2_457_4817_-0.00213847229394126_12.2331494420915_0.301841929732193 chr10 78296144 78301113 + 0.301841929732193 NA intron (NM_053014, intron 2 of 9) intron (NM_053014, intron 2 of 9) 41579 NR_106119 102465765 NR_106119 ENSMUSG00000098885 Mir7659 Gm27433|mmu-mir-7659 microRNA 7659 ncRNA common_peak1_24_135_-0.00144764911395523_7.08673901669336_0.301831278814359-3 chr17 26113322 26113814 + 0.301831278814359 NA intron (NM_021793, intron 1 of 12) CpG 252 NM_021793 60455 Mm.304656 NM_021793 ENSMUSG00000024180 Tmem8 AW490096|M83|Tmem8a transmembrane protein 8 (five membrane-spanning domains) protein-coding common_peak1_24_135_-0.00144764911395523_7.08673901669336_0.301831278814359 chr10 119085302 119085928 + 0.301831278814359 NA Intergenic URR1B|DNA|hAT-Charlie -7290 NR_045348 73400 Mm.416864 NR_045348 ENSMUSG00000100681 1700064J06Rik - RIKEN cDNA 1700064J06 gene ncRNA common_peak1_24_135_-0.00144764911395523_7.08673901669336_0.301831278814359-4 chr4 149675724 149676170 + 0.301831278814359 NA 5' UTR (NM_001164051, exon 1 of 24) 5' UTR (NM_001164051, exon 1 of 24) 142 NM_001164051 18707 Mm.229108 NM_008840 ENSMUSG00000039936 Pik3cd 2410099E07Rik|2610208K16Rik|AW545373|p110delta phosphatidylinositol 3-kinase catalytic delta polypeptide protein-coding common_peak1_24_135_-0.00144764911395523_7.08673901669336_0.301831278814359-2 chr14 54883389 54883880 + 0.301831278814359 NA intron (NM_007537, intron 1 of 3) intron (NM_007537, intron 1 of 3) 209 NM_007537 12050 Mm.6967 NM_007537 ENSMUSG00000089682 Bcl2l2 AW048834|Bcl-w|Gtrgal2|Gtrosa41|bclw|c98 BCL2-like 2 protein-coding common_peak1_24_135_-0.00144764911395523_7.08673901669336_0.301831278814359-5 chr7 101360753 101361414 + 0.301831278814359 NA intron (NM_001040111, intron 1 of 33) intron (NM_001040111, intron 1 of 33) 13014 NM_001040111 69710 Mm.277687 NM_027180 ENSMUSG00000032812 Arap1 2410002L19Rik|Centd2|mKIAA0782 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding unique_peak2_24_137_-0.0225092646417853_7.09726982445728_0.301825408581719 chr15 77938220 77939474 + 0.301825408581719 NA Intergenic RLTR14|LTR|ERV1 -9853 NM_019913 56551 Mm.291917 NM_019913 ENSMUSG00000005354 Txn2 2510006J11Rik|AI788873|Trx2 thioredoxin 2 protein-coding unique_peak2_24_137_-0.0225092646417853_7.09726982445728_0.301825408581719-2 chr18 89209423 89210892 + 0.301825408581719 NA intron (NM_178687, intron 3 of 6) intron (NM_178687, intron 3 of 6) 12730 NM_001039149 225825 Mm.139293 NM_178687 ENSMUSG00000034028 Cd226 BC051526|DNAM-1|DNAM1|Pta1|TLiSA1 CD226 antigen protein-coding common_peak1_24_137_-0.0225092646417853_7.09726982445728_0.301825408581719 chr10 79897906 79898415 + 0.301825408581719 NA intron (NM_198107, intron 10 of 14) intron (NM_198107, intron 10 of 14) 7307 NM_001291915 11537 Mm.4407 NM_013459 ENSMUSG00000061780 Cfd Adn|DF complement factor D (adipsin) protein-coding common_peak1_77_547_0.00152367783369023_9.09879392187737_0.30182250428238 chr2 174076234 174077621 + 0.30182250428238 NA promoter-TSS (NM_001102423) promoter-TSS (NM_001102423) -124 NM_172675 228960 Mm.277977 NM_172675 ENSMUSG00000027522 Stx16 4930401D03|5430410K23Rik|6330500A18Rik|AI648908|AW553605|Syn16 syntaxin 16 protein-coding common_peak2_78_555_0.00315801838980967_9.12052008191841_0.301811101268046 chr16 4557903 4559779 + 0.301811101268046 NA intron (NM_031182, intron 1 of 6) CpG 879 NM_031182 83383 Mm.273210 NM_031182 ENSMUSG00000005718 Tfap4 AI642933|AP-4|D930048N17Rik|Tcfap4|bHLHc41 transcription factor AP4 protein-coding common_peak1_247_2271_-0.00322798121130674_11.148133128899_0.301795609656535 chr11 116411791 116413766 + 0.301795609656535 NA exon (NM_027258, exon 1 of 19) exon (NM_027258, exon 1 of 19) 254 NM_027258 217340 Mm.426344 NM_027258 ENSMUSG00000052949 Rnf157 2610036E23Rik|A130073L17Rik|mKIAA1917 ring finger protein 157 protein-coding common_peak1_25_142_-0.00445009213745706_7.15764629070966_0.301791917371013 chr9 122188153 122188810 + 0.301791917371013 NA intron (NM_133979, intron 12 of 12) intron (NM_133979, intron 12 of 12) 71215 NM_133741 20623 Mm.257989 NM_133741 ENSMUSG00000038145 Snrk 2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096 SNF related kinase protein-coding common_peak1_25_144_-0.0244878453740025_7.16766516732793_0.301786607790524 chr10 19008815 19009394 + 0.301786607790524 NA intron (NM_001166402, intron 1 of 7) intron (NM_001166402, intron 1 of 7) 2859 NM_001166402 21929 Mm.116683 NM_009397 ENSMUSG00000019850 Tnfaip3 A20|Tnfip3 tumor necrosis factor, alpha-induced protein 3 protein-coding common_peak1_25_144_-0.0244878453740025_7.16766516732793_0.301786607790524-2 chr4 101227037 101227666 + 0.301786607790524 NA intron (NM_146145, intron 1 of 24) intron (NM_146145, intron 1 of 24) 37931 NM_146145 16451 Mm.289657 NM_146145 ENSMUSG00000028530 Jak1 AA960307|BAP004|C130039L05Rik Janus kinase 1 protein-coding common_peak2_25_144_-0.0244878453740025_7.16766516732793_0.301786607790524 chr5 113650291 113651465 + 0.301786607790524 NA promoter-TSS (NM_008153) promoter-TSS (NM_008153) -488 NM_008153 14747 Mm.5196 NM_008153 ENSMUSG00000042190 Cmklr1 ChemR23|DEZ|Gpcr27|mcmklr1 chemokine-like receptor 1 protein-coding common_peak1_80_573_0.00143515631719104_9.16562450483428_0.301786606642527 chr14 25640622 25641559 + 0.301786606642527 NA intron (NM_001310666, intron 7 of 23) intron (NM_001310666, intron 7 of 23) 37577 NM_001309430 100188919 Mm.473810 NM_001309430 Israa - immune system released activating agent protein-coding common_peak1_80_573_0.00143515631719104_9.16562450483428_0.301786606642527-2 chr3 8923060 8924506 + 0.301786606642527 NA promoter-TSS (NM_025434) promoter-TSS (NM_025434) 74 NM_025434 66230 Mm.38460 NM_025434 ENSMUSG00000040269 Mrps28 1500012D08Rik|AW061224 mitochondrial ribosomal protein S28 protein-coding common_peak1_81_581_0.00318023334349959_9.18646545958003_0.301776206481163 chr14 69501926 69503284 + 0.301776206481163 NA Intergenic CpG 9944 NM_173420 239167 Mm.259889 NM_173420 ENSMUSG00000047977 Synb D930020E02Rik|syncytin-B syncytin b protein-coding common_peak1_26_148_0.00303904637743369_7.22068804365088_0.301761132536794 chr11 119862620 119863392 + 0.301761132536794 NA intron (NM_028898, intron 20 of 33) intron (NM_028898, intron 20 of 33) -19283 NR_039557 100628577 NR_039557 ENSMUSG00000093061 Mir5098 mmu-mir-5098|mu-mir-5098 microRNA 5098 ncRNA common_peak2_26_148_0.00303904637743369_7.22068804365088_0.301761132536794 chr1 165680725 165681845 + 0.301761132536794 NA intron (NM_178593, intron 1 of 6) intron (NM_178593, intron 1 of 6) 26809 NM_178593 226594 Mm.265552 NM_178593 ENSMUSG00000040723 Rcsd1 A430105K13Rik|BC025872|CapZIP RCSD domain containing 1 protein-coding unique_peak2_26_148_0.00303904637743369_7.22068804365088_0.301761132536794 chr8 115188864 115189882 + 0.301761132536794 NA intron (NM_019573, intron 8 of 8) intron (NM_019573, intron 8 of 8) 517521 NM_001025577 17132 Mm.275549 NM_001025577 ENSMUSG00000055435 Maf 2810401A20Rik|A230108G15Rik|AW047063|c-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding common_peak2_499_5352_0.00121346407242129_12.3867386693512_0.301759902393797 chr16 92860667 92870132 + 0.301759902393797 NA Intergenic BC1_Mm|scRNA|scRNA -39325 NM_001111022 12394 Mm.4081 NM_009821 ENSMUSG00000022952 Runx1 AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b runt related transcription factor 1 protein-coding common_peak1_161_1342_0.00171080475179153_10.3920989918033_0.301757321891663 chr2 11552654 11554445 + 0.301757321891663 NA intron (NM_001177758, intron 1 of 14) intron (NM_001177758, intron 1 of 14) 380 NM_001177758 170768 Mm.19669 NM_133232 ENSMUSG00000026773 Pfkfb3 E330010H22Rik|iPFK-2|uPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding unique_peak2_26_150_-0.0161971724854837_7.23030615308234_0.301756241970753 chr17 27552539 27553867 + 0.301756241970753 NA Intergenic Intergenic -3371 NM_001166536 15361 Mm.4438 NM_016660 ENSMUSG00000046711 Hmga1 AL023995|Hmga1a|Hmga1b|Hmgi|Hmgiy|Hmgy high mobility group AT-hook 1 protein-coding common_peak1_26_150_-0.0161971724854837_7.23030615308234_0.301756241970753 chr12 102306654 102307191 + 0.301756241970753 NA intron (NM_001161365, intron 1 of 9) ORR1A3|LTR|ERVL-MaLR 23281 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_83_599_0.00188057567532951_9.22975897833355_0.301753820135412 chr13 32801919 32802954 + 0.301753820135412 NA exon (NM_030215, exon 1 of 7) exon (NM_030215, exon 1 of 7) 406 NM_030215 78903 Mm.286680 NM_030215 ENSMUSG00000021400 Wrnip1 4833444L21Rik|WHIP|Wrnip Werner helicase interacting protein 1 protein-coding common_peak1_83_603_-0.00770547315386771_9.23455200274815_0.301751415400656 chr13 21779524 21780743 + 0.301751415400656 NA exon (NM_020034, exon 1 of 1) exon (NM_020034, exon 1 of 1) 492 NM_020034 56702 Mm.221314 NM_020034 ENSMUSG00000058773 Hist1h1b H1.5|H1B|H1f5|H1s-3 histone cluster 1, H1b protein-coding common_peak1_84_608_0.00134342994615899_9.25097013287941_0.301743123212648 chr11 61407801 61408854 + 0.301743123212648 NA Intergenic CpG -30252 NM_026183 67473 Mm.100741 NM_026183 ENSMUSG00000010122 Slc47a1 1300013J15Rik|AI036982|MATE1|mMATE1 solute carrier family 47, member 1 protein-coding common_peak1_85_616_0.0032128022908875_9.27073308029486_0.301733876817718 chr19 40477805 40479287 + 0.301733876817718 NA intron (NM_178362, intron 1 of 28) intron (NM_178362, intron 1 of 28) -27148 NM_001034963 20411 Mm.210815 NM_009166 ENSMUSG00000025006 Sorbs1 2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296 sorbin and SH3 domain containing 1 protein-coding common_peak1_85_620_-0.00610997678017711_9.27539446983039_0.301731602563126 chr3 145937969 145938671 + 0.301731602563126 NA exon (NM_025555, exon 1 of 3) exon (NM_025555, exon 1 of 3) 288 NM_025555 66421 Mm.25137 NM_025555 ENSMUSG00000036873 2410004B18Rik 4930572C24Rik RIKEN cDNA 2410004B18 gene protein-coding common_peak2_166_1393_0.00173175981953655_10.4458807257782_0.301730721926471 chr11 94320804 94322677 + 0.301730721926471 NA exon (NM_026313, exon 1 of 11) exon (NM_026313, exon 1 of 11) 171 NM_026313 67684 Mm.30927 NM_026313 ENSMUSG00000020863 Luc7l3 3300001P08Rik|Luc7a LUC7-like 3 (S. cerevisiae) protein-coding common_peak2_166_1393_0.00173175981953655_10.4458807257782_0.301730721926471-2 chr14 103344825 103347671 + 0.301730721926471 NA exon (NM_207215, exon 1 of 85) exon (NM_207215, exon 1 of 85) 552 NM_207215 105689 Mm.6478 NM_207215 ENSMUSG00000033004 Mycbp2 AU023734|AW107953|AW546647|C130061D10Rik|Pam|Phr1|R75243 MYC binding protein 2 protein-coding common_peak1_27_155_0.00116253115567666_7.28598348444009_0.301728219506941 chr17 31830734 31831405 + 0.301728219506941 NA Intergenic Intergenic 24723 NM_010831 17691 Mm.290941 NM_010831 ENSMUSG00000024042 Sik1 Msk|Sik|Snf1lk salt inducible kinase 1 protein-coding common_peak2_27_155_0.00116253115567666_7.28598348444009_0.301728219506941 chr3 116861268 116862158 + 0.301728219506941 NA promoter-TSS (NM_009146) promoter-TSS (NM_009146) 33 NM_009146 20321 Mm.66293 NM_009146 ENSMUSG00000033386 Frrs1 AI131732|Sdfr2 ferric-chelate reductase 1 protein-coding common_peak2_27_157_-0.0172159981591777_7.29517274909751_0.301723757997487 chr13 46360562 46361541 + 0.301723757997487 NA Intergenic Intergenic -57249 NM_001081425 666794 Mm.38269 NM_001081425 ENSMUSG00000038132 Rbm24 6330546B05Rik|AI606861 RNA binding motif protein 24 protein-coding common_peak2_27_157_-0.0172159981591777_7.29517274909751_0.301723757997487-2 chr19 10817692 10818740 + 0.301723757997487 NA intron (NM_009852, intron 1 of 12) intron (NM_009852, intron 1 of 12) 11842 NM_001037801 12511 Mm.290897 NM_009852 ENSMUSG00000024670 Cd6 - CD6 antigen protein-coding common_peak2_87_634_0.00240958340713426_9.3118175733631_0.301713924264648 chr2 79635210 79636722 + 0.301713924264648 NA intron (NM_080558, intron 1 of 17) CpG 541 NM_080558 70599 Mm.272881 NM_080558 ENSMUSG00000027007 Ssfa2 5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927 sperm specific antigen 2 protein-coding common_peak2_171_1450_-0.00388001144008143_10.5008917983467_0.301704598880306 chr5 65390080 65392343 + 0.301704598880306 NA promoter-TSS (NM_024471) promoter-TSS (NM_024471) 220 NM_011292 20005 Mm.300271 NM_011292 ENSMUSG00000047215 Rpl9 - ribosomal protein L9 protein-coding common_peak2_88_647_-0.00683163412043619_9.33643418582441_0.301702278412501 chr1 39985568 39988164 + 0.301702278412501 NA intron (NM_001252200, intron 10 of 31) intron (NM_001252200, intron 10 of 31) 85953 NM_008696 26921 Mm.491139 NM_008696 ENSMUSG00000026074 Map4k4 9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik mitogen-activated protein kinase kinase kinase kinase 4 protein-coding common_peak1_28_162_-6.48397185090133e-05_7.34869573437182_0.301698142075109 chr7 125593532 125594160 + 0.301698142075109 NA Intergenic Intergenic -9583 NM_021887 60504 Mm.155643 NM_021887 ENSMUSG00000030745 Il21r NILR interleukin 21 receptor protein-coding unique_peak2_28_164_-0.0176588997332479_7.35749276437919_0.30169405553992-2 chr9 75430967 75432250 + 0.30169405553992 NA Intergenic Intergenic -9916 NM_001039522 235497 Mm.41508 NM_001006122 ENSMUSG00000042487 Leo1 Gm185 Leo1, Paf1/RNA polymerase II complex component protein-coding common_peak2_28_164_-0.0176588997332479_7.35749276437919_0.30169405553992 chr1 9545329 9546142 + 0.30169405553992 NA exon (NM_021511, exon 1 of 1) exon (NM_021511, exon 1 of 1) 327 NM_021511 59014 Mm.29061 NM_021511 ENSMUSG00000061024 Rrs1 5730466A07Rik|AA415037|D1Ertd701e|Rrr ribosome biogenesis regulator 1 protein-coding common_peak1_28_164_-0.0176588997332479_7.35749276437919_0.30169405553992 chr8 19979930 19980780 + 0.30169405553992 NA intron (NM_001270553, intron 6 of 9) CpG 250779 NM_001039553 626415 Mm.425517 NM_001039553 ENSMUSG00000096265 4930467E23Rik ENSMUSG00000074453|OTTMUSG00000018948|TSAP RIKEN cDNA 4930467E23 gene protein-coding unique_peak2_28_164_-0.0176588997332479_7.35749276437919_0.30169405553992 chr17 56461740 56462688 + 0.30169405553992 NA promoter-TSS (NM_001252456) promoter-TSS (NM_001252456) 7 NM_001252456 19280 Mm.258771 NM_011218 ENSMUSG00000013236 Ptprs AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma protein tyrosine phosphatase, receptor type, S protein-coding common_peak2_89_656_-0.00695861157134203_9.35627025453666_0.301693040932117 chr9 61945979 61948290 + 0.301693040932117 NA promoter-TSS (NM_024245) promoter-TSS (NM_024245) -335 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding common_peak1_174_1475_0.00207429534145831_10.5285141537311_0.301691805857293 chr8 71922309 71923620 + 0.301691805857293 NA 5' UTR (NM_133358, exon 1 of 4) 5' UTR (NM_133358, exon 1 of 4) 139 NM_133358 170938 Mm.480419 NM_133358 ENSMUSG00000066880 Zfp617 Zfps11-6 zinc finger protein 617 protein-coding common_peak2_90_661_0.00165763591282975_9.37151622476363_0.301686029874002 chr5 135393582 135395170 + 0.301686029874002 NA exon (NM_148932, exon 1 of 13) exon (NM_148932, exon 1 of 13) 170 NM_148932 107939 Mm.28399 NM_148932 ENSMUSG00000053293 Pom121 2610027A18Rik|C80273|mKIAA0618 nuclear pore membrane protein 121 protein-coding common_peak2_91_674_-0.00705826547197042_9.39521455920221_0.30167530716688 chr4 145194031 145195214 + 0.30167530716688 NA intron (NM_001276465, intron 1 of 69) intron (NM_001276465, intron 1 of 69) 383 NM_001276465 230895 Mm.240310 NM_001033190 ENSMUSG00000020220 Vps13d - vacuolar protein sorting 13D protein-coding common_peak2_92_679_0.00142578474988753_9.41010382851265_0.301668664249926 chr4 34614207 34615727 + 0.301668664249926 NA promoter-TSS (NM_015824) promoter-TSS (NM_015824) 9 NM_181406 109093 Mm.22363 NM_181406 ENSMUSG00000028292 Rars2 1500002I10Rik|PRO1992|Rarsl arginyl-tRNA synthetase 2, mitochondrial protein-coding unique_peak2_29_171_-0.0176083221043948_7.4174605936499_0.301666792004699 chr5 122948362 122949307 + 0.301666792004699 NA intron (NM_001003953, intron 7 of 22) B2_Mm2|SINE|B2 40265 NM_001003953 30841 Mm.86406 NM_013910 ENSMUSG00000029475 Kdm2b Cxxc2|Fbl10|Fbxl10|Jhdm1b|PCCX2 lysine (K)-specific demethylase 2B protein-coding common_peak1_93_688_0.00138322590808393_9.42905178565833_0.301660321693474 chr11 118401234 118402619 + 0.301660321693474 NA promoter-TSS (NM_011150) promoter-TSS (NM_011150) 5 NM_011150 19039 Mm.3152 NM_011150 ENSMUSG00000033880 Lgals3bp 90K|CyCAP|MAC-2BP|Ppicap|Tango10b lectin, galactoside-binding, soluble, 3 binding protein protein-coding common_peak1_93_692_-0.00696814352483877_9.4332274703748_0.301658497303565 chr7 28350696 28351546 + 0.301658497303565 NA promoter-TSS (NR_028129) promoter-TSS (NR_028129) -419 NR_028129 100302567 NR_028129 AF357399 MBI-142 snoRNA AF357399 snoRNA common_peak2_30_176_-0.000923345348691207_7.46714387740865_0.301645144478021 chr6 145210314 145211039 + 0.301645144478021 NA promoter-TSS (NM_133688) promoter-TSS (NM_133688) 294 NM_177222 320662 Mm.207779 NM_177222 ENSMUSG00000043541 Casc1 A230084G12Rik|Las1 cancer susceptibility candidate 1 protein-coding common_peak1_30_178_-0.01713357252995_7.47524899099928_0.301641678841793 chr15 76465371 76466030 + 0.301641678841793 NA intron (NM_013481, intron 3 of 15) intron (NM_013481, intron 3 of 15) 8262 NM_198885 20289 Mm.322821 NM_198885 ENSMUSG00000034161 Scx BB114693|Bhlha41|Scl scleraxis protein-coding common_peak2_190_1649_-0.00387880314638345_10.68631090756_0.301623114159182 chr5 113734906 113736871 + 0.301623114159182 NA 5' UTR (NM_001010825, exon 1 of 3) 5' UTR (NM_001010825, exon 1 of 3) 106 NM_001010825 231630 Mm.21926 NM_001010825 ENSMUSG00000053334 Ficd D5Ertd40e|Hype FIC domain containing protein-coding common_peak1_31_183_-0.000696381745489028_7.52321376518427_0.301621678251601 chr11 11703132 11703921 + 0.301621678251601 NA intron (NM_001301866, intron 2 of 5) intron (NM_001301866, intron 2 of 5) 13349 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding unique_peak2_31_183_-0.000696381745489028_7.52321376518427_0.301621678251601 chr2 79065033 79066443 + 0.301621678251601 NA Intergenic Intergenic -189688 NM_010576 16401 Mm.31903 NM_010576 ENSMUSG00000027009 Itga4 CD49D|Itga4B integrin alpha 4 protein-coding common_peak2_31_183_-0.000696381745489028_7.52321376518427_0.301621678251601 chrX 20424978 20426544 + 0.301621678251601 NA promoter-TSS (NM_199317) promoter-TSS (NM_199317) 73 NM_001289684 382207 Mm.281517 NM_199317 ENSMUSG00000037315 Jade3 5730598B06|AI851988|AW544806|Phf16|mKIAA0215 jade family PHD finger 3 protein-coding common_peak2_98_733_0.00181821097095103_9.52054535832869_0.301621677702616 chr2 32446861 32448836 + 0.301621677702616 NA intron (NM_001164357, intron 1 of 9) intron (NM_001164357, intron 1 of 9) -2609 NM_194335 71254 Mm.102341 NM_194335 ENSMUSG00000039164 Naif1 2310007O20Rik|4933440H19Rik nuclear apoptosis inducing factor 1 protein-coding unique_peak2_31_185_-0.016293236796507_7.53101219270978_0.301618471292127 chr12 11300104 11301495 + 0.301618471292127 NA TTS (NR_106136) TTS (NR_106136) 912 NR_106136 102465775 NR_106136 ENSMUSG00000098879 Mir7675 Gm27965|mmu-mir-7675 microRNA 7675 ncRNA common_peak1_31_185_-0.016293236796507_7.53101219270978_0.301618471292127-2 chr3 88424592 88425223 + 0.301618471292127 NA 5' UTR (NM_001281795, exon 1 of 4) 5' UTR (NM_001281795, exon 1 of 4) 227 NM_001281795 229517 Mm.301740 NM_178696 ENSMUSG00000050144 Slc25a44 6720482A19|B430110G05Rik solute carrier family 25, member 44 protein-coding common_peak1_31_185_-0.016293236796507_7.53101219270978_0.301618471292127-3 chr8 117285459 117285895 + 0.301618471292127 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 28658 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_31_185_-0.016293236796507_7.53101219270978_0.301618471292127 chr16 58712237 58712906 + 0.301618471292127 NA Intergenic Intergenic 6153 NM_001162955 71223 Mm.359970 NM_001162955 ENSMUSG00000047293 Gpr15 4933439K08Rik G protein-coupled receptor 15 protein-coding common_peak2_31_185_-0.016293236796507_7.53101219270978_0.301618471292127 chr9 21372363 21374026 + 0.301618471292127 NA intron (NM_001277322, intron 1 of 21) B1_Mur4|SINE|Alu 4662 NM_001277322 16201 Mm.440026 NM_010561 ENSMUSG00000032178 Ilf3 MBII-26|MPHOSPH4|NF90|NFAR interleukin enhancer binding factor 3 protein-coding common_peak2_99_742_0.00202141397049971_9.53822910752385_0.301614510620527 chr2 156546608 156548479 + 0.301614510620527 NA promoter-TSS (NM_001164818) promoter-TSS (NM_001164818) -33 NM_026661 68295 Mm.253648 NM_026661 ENSMUSG00000027628 Aar2 0610011L14Rik AAR2 splicing factor homolog protein-coding common_peak2_100_755_-0.0053942306156145_9.55954530891326_0.301605983209196 chr9 120066707 120069247 + 0.301605983209196 NA intron (NM_009987, intron 1 of 1) YREP_Mm|Unknown|Unknown 319 NM_009987 13051 Mm.44065 NM_009987 ENSMUSG00000052336 Cx3cr1 - chemokine (C-X3-C motif) receptor 1 protein-coding unique_peak2_32_190_-0.000108880374869003_7.57737438784831_0.301599936583344 chr5 100586943 100588462 + 0.301599936583344 NA Intergenic Intergenic -15497 NM_139198 231507 Mm.34609 NM_139198 ENSMUSG00000029322 Plac8 C15|D5Wsu111e placenta-specific 8 protein-coding common_peak1_102_774_-0.006504616384861_9.59480019196917_0.30159182568142 chr17 8146703 8147857 + 0.30159182568142 NA intron (NM_001083938, intron 1 of 8) intron (NM_001083938, intron 1 of 8) 508 NM_001083938 100037283 Mm.426736 NM_001083938 ENSMUSG00000095687 Rnaset2a 0610007O07Rik|4833423A10Rik|4930532K22Rik|C79750|RNASE6PL|Rnaset2 ribonuclease T2A protein-coding common_peak2_103_779_0.00131555326403365_9.60798809038163_0.301586783613825 chr18 31803585 31804930 + 0.301586783613825 NA intron (NM_001170970, intron 1 of 7) CpG 200 NM_001170966 74320 Mm.277705 NM_028866 ENSMUSG00000024400 Wdr33 1110001N06Rik|2310011G05Rik|2810021O11Rik|8430413N20Rik|WDC146 WD repeat domain 33 protein-coding common_peak2_202_1770_0.00185092702612444_10.791273960265_0.301581597527389 chr18 20895137 20897329 + 0.301581597527389 NA promoter-TSS (NM_029491) promoter-TSS (NM_029491) -155 NM_029491 75964 Mm.273769 NM_029491 ENSMUSG00000033382 Trappc8 5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012 trafficking protein particle complex 8 protein-coding common_peak1_33_197_0.000791952080917646_7.62975259612007_0.301579736101751-2 chr6 128785028 128785613 + 0.301579736101751 NA intron (NM_001159904, intron 2 of 5) RLTR35B_MM|LTR|ERVL 3321 NM_008527 17059 Mm.480764 NM_008527 ENSMUSG00000030325 Klrb1c AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c killer cell lectin-like receptor subfamily B member 1C protein-coding common_peak1_33_197_0.000791952080917646_7.62975259612007_0.301579736101751 chr1 52844202 52844788 + 0.301579736101751 NA promoter-TSS (NM_146108) promoter-TSS (NM_146108) -543 NM_146108 227095 Mm.222063 NM_146108 ENSMUSG00000041426 Hibch 2610509I15Rik|HIBYL-COA-H 3-hydroxyisobutyryl-Coenzyme A hydrolase protein-coding unique_peak2_33_197_0.000791952080917646_7.62975259612007_0.301579736101751 chr6 148288615 148290038 + 0.301579736101751 NA intron (NM_198967, intron 10 of 19) B3|SINE|B2 -65330 NR_003634 66184 Mm.391542 NM_025405 ENSMUSG00000063171 Rps4l 1110033J19Rik|AA407494|Rps4y2 ribosomal protein S4-like pseudo common_peak1_33_199_-0.0137076176141973_7.63700238096763_0.301576966622439 chr6 144910318 144910937 + 0.301576966622439 NA Intergenic Intergenic 138185 NM_001024468 12035 Mm.4606 NM_007532 ENSMUSG00000030268 Bcat1 BCATc|Eca39 branched chain aminotransferase 1, cytosolic protein-coding common_peak1_204_1792_0.00138907907537167_10.8088543124061_0.301574831291708 chr5 76139717 76141178 + 0.301574831291708 NA exon (NM_020611, exon 1 of 6) exon (NM_020611, exon 1 of 6) 174 NM_020611 57357 Mm.289446 NM_020611 ENSMUSG00000029233 Srd5a3 1110025P14Rik|A430076C09|AV364670|AW987574|D730040M03Rik|H5ar|S5AR 3|Srd5a2l steroid 5 alpha-reductase 3 protein-coding common_peak2_107_816_0.00123992106662385_9.674812228679_0.301561567989623 chr15 72927996 72930345 + 0.301561567989623 NA intron (NM_001164641, intron 15 of 17) intron (NM_001164641, intron 15 of 17) -118846 NR_002864 353342 Mm.440245 NR_002864 ENSMUSG00000106847 Peg13 - paternally expressed 13 ncRNA common_peak1_34_204_0.00196561501808734_7.68046290701449_0.301560918542471 chr17 46545970 46546567 + 0.301560918542471 NA TTS (NM_020493) TTS (NM_020493) 120 NM_001081335 78309 Mm.329076 NM_001081335 ENSMUSG00000040327 Cul9 1810035I07Rik|Cul-9|Parc|mKIAA0708 cullin 9 protein-coding common_peak1_107_820_-0.00580622256549823_9.67833530049506_0.301560269887566 chr1 86064199 86065228 + 0.301560269887566 NA promoter-TSS (NM_027357) promoter-TSS (NM_027357) 94 NM_027357 70247 Mm.280013 NM_027357 ENSMUSG00000026229 Psmd1 2410026J11Rik|P112|S1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 protein-coding common_peak1_34_206_-0.0120412429757915_7.68746633601143_0.301558334971127-2 chr5 65763265 65763861 + 0.301558334971127 NA promoter-TSS (NM_001024917) promoter-TSS (NM_001024917) 42 NM_001024917 333789 Mm.332398 NM_001024917 ENSMUSG00000037795 N4bp2 B3bp|E430014I16|Gm1791|Gm868 NEDD4 binding protein 2 protein-coding unique_peak2_34_206_-0.0120412429757915_7.68746633601143_0.301558334971127 chr10 20906125 20907250 + 0.301558334971127 NA Intergenic Intergenic -45860 NM_026203 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak2_34_206_-0.0120412429757915_7.68746633601143_0.301558334971127 chr5 72802186 72803488 + 0.301558334971127 NA intron (NM_013689, intron 3 of 17) B1F2|SINE|Alu -50060 NM_001122754 22165 Mm.3264 NM_013698 ENSMUSG00000054892 Txk A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk TXK tyrosine kinase protein-coding common_peak1_34_206_-0.0120412429757915_7.68746633601143_0.301558334971127 chr14 24490701 24491246 + 0.301558334971127 NA intron (NM_011297, intron 1 of 5) CpG 292 NM_011297 20088 Mm.16775 NM_011297 ENSMUSG00000025290 Rps24 - ribosomal protein S24 protein-coding common_peak1_209_1852_-0.0034546241640907_10.8539198539452_0.301558048997703 chr19 40685772 40688450 + 0.301558048997703 NA intron (NM_009848, intron 1 of 9) intron (NM_009848, intron 1 of 9) 27341 NM_009848 12495 Mm.2824 NM_009848 ENSMUSG00000048120 Entpd1 2610206B08Rik|AA408691|Cd39|NTPDase-1 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding common_peak2_212_1884_-0.00305474615572621_10.8788214350782_0.301549072788555 chr5 122391182 122393298 + 0.301549072788555 NA intron (NM_019824, intron 1 of 6) intron (NM_019824, intron 1 of 6) 312 NM_019824 56378 Mm.275942 NM_019824 ENSMUSG00000029465 Arpc3 1110006A04Rik|p21-ARC|p21-Ar|p21Arc actin related protein 2/3 complex, subunit 3 protein-coding common_peak1_35_211_0.00337721849582451_7.72960906381111_0.301543346593568 chr6 130065777 130066437 + 0.301543346593568 NA intron (NM_001252577, intron 1 of 6) intron (NM_001252577, intron 1 of 6) 1151 NM_053153 93970 Mm.333431 NM_053153 Klra18 Ly49r killer cell lectin-like receptor, subfamily A, member 18 protein-coding common_peak2_35_211_0.00337721849582451_7.72960906381111_0.301543346593568-2 chr3 14533352 14534651 + 0.301543346593568 NA exon (NM_001163579, exon 1 of 19) exon (NM_001163579, exon 1 of 19) 213 NM_028915 71710 Mm.257449 NM_028915 ENSMUSG00000027550 Lrrcc1 1200008A14Rik|4932441F23Rik|AI195358|AI447421 leucine rich repeat and coiled-coil domain containing 1 protein-coding common_peak2_35_211_0.00337721849582451_7.72960906381111_0.301543346593568 chr12 3364765 3365967 + 0.301543346593568 NA 5' UTR (NM_008445, exon 1 of 8) 5' UTR (NM_008445, exon 1 of 8) 234 NM_008445 16570 Mm.7688 NM_008445 ENSMUSG00000020668 Kif3c mKIAA4058 kinesin family member 3C protein-coding common_peak1_110_848_-0.00570257618834269_9.72676945545887_0.301542740154198 chr3 94886277 94887402 + 0.301542740154198 NA exon (NM_008945, exon 1 of 7) exon (NM_008945, exon 1 of 7) 119 NM_008945 19172 Mm.368 NM_008945 ENSMUSG00000005779 Psmb4 Pros-27 proteasome (prosome, macropain) subunit, beta type 4 protein-coding common_peak1_35_213_-0.0101693133421232_7.73638232973008_0.301540930819968 chr15 76380450 76381079 + 0.301540930819968 NA intron (NM_175457, intron 1 of 43) CpG 251 NM_175457 223658 Mm.123240 NM_175457 ENSMUSG00000022558 Mroh1 D330001F17Rik|Heatr7a maestro heat-like repeat family member 1 protein-coding common_peak2_35_213_-0.0101693133421232_7.73638232973008_0.301540930819968 chr12 69457779 69459008 + 0.301540930819968 NA Intergenic Intergenic 17157 NR_038060 76062 Mm.380755 NR_038060 5830428M24Rik 100040862|Gm3007 RIKEN cDNA 5830428M24 gene ncRNA common_peak1_217_1938_-0.00274254139080021_10.9197258174114_0.301534598134263 chr2 144555262 144556820 + 0.301534598134263 NA promoter-TSS (NM_001252545) promoter-TSS (NM_001252545) -188 NM_001252544 27054 Mm.248492 NM_019787 ENSMUSG00000027429 Sec23b - SEC23 homolog B, COPII coat complex component protein-coding common_peak2_112_866_-0.00436868504943355_9.75770384069712_0.301532070320734 chr6 108553905 108555907 + 0.301532070320734 NA Intergenic Intergenic 65163 NR_106121 102465766 NR_106121 ENSMUSG00000105697 Mir7661 mmu-mir-7661 microRNA 7661 ncRNA unique_peak2_36_219_-0.00157606231324969_7.78057168236804_0.301524636731712 chr5 34546016 34547517 + 0.301524636731712 NA intron (NM_001145858, intron 1 of 12) intron (NM_001145858, intron 1 of 12) -2810 NM_001145859 24055 Mm.5012 NM_011893 ENSMUSG00000054520 Sh3bp2 3BP2 SH3-domain binding protein 2 protein-coding common_peak2_221_1976_0.00143332282184438_10.9498138171401_0.301524136083528-2 chr11 98148215 98150731 + 0.301524136083528 NA 5' UTR (NM_028149, exon 1 of 15) 5' UTR (NM_028149, exon 1 of 15) 143 NM_028149 72194 Mm.218350 NM_028149 ENSMUSG00000020883 Fbxl20 2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147 F-box and leucine-rich repeat protein 20 protein-coding common_peak2_221_1976_0.00143332282184438_10.9498138171401_0.301524136083528 chr10 13191813 13193914 + 0.301524136083528 NA intron (NM_181470, intron 1 of 10) CpG 274 NM_181470 353258 Mm.117581 NM_181470 ENSMUSG00000019814 Ltv1 2610020N02Rik LTV1 ribosome biogenesis factor protein-coding common_peak2_224_2009_0.0013044383766605_10.9736320052546_0.301516025344611 chr2 32450234 32453020 + 0.301516025344611 NA promoter-TSS (NM_146118) promoter-TSS (NM_146118) -157 NM_146118 227731 Mm.37395 NM_146118 ENSMUSG00000026819 Slc25a25 1110030N17Rik|MCSC|mKIAA1896 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 protein-coding common_peak2_115_895_-0.00546698517232258_9.80462142947144_0.301515783776439 chr13 90088679 90090412 + 0.301515783776439 NA promoter-TSS (NM_028012) promoter-TSS (NM_028012) 63 NM_028012 108138 Mm.37531 NM_028012 ENSMUSG00000021615 Xrcc4 2310057B22Rik|AW413319|AW545101 X-ray repair complementing defective repair in Chinese hamster cells 4 protein-coding common_peak1_37_228_-0.0122272735136972_7.83309015134009_0.301507242731709-2 chr3 36475084 36475736 + 0.301507242731709 NA promoter-TSS (NM_028183) promoter-TSS (NM_028183) 114 NR_105976 102466786 NR_105976 ENSMUSG00000098808 Mir7009 Gm27472|mmu-mir-7009 microRNA 7009 ncRNA common_peak1_37_228_-0.0122272735136972_7.83309015134009_0.301507242731709-3 chr7 118277772 118278532 + 0.301507242731709 NA Intergenic Intergenic 34245 NR_027879 67745 Mm.483404 NM_183267 ENSMUSG00000055159 4930583K01Rik - RIKEN cDNA 4930583K01 gene ncRNA common_peak1_37_228_-0.0122272735136972_7.83309015134009_0.301507242731709 chr2 151494223 151494888 + 0.301507242731709 NA intron (NM_001291074, intron 1 of 8) CpG 373 NM_198326 386649 Mm.419479 NM_198326 ENSMUSG00000027455 Nsfl1c Munc-18c|Stxbp3a|p47 NSFL1 (p97) cofactor (p47) protein-coding unique_peak2_37_228_-0.0122272735136972_7.83309015134009_0.301507242731709 chr5 109923059 109924109 + 0.301507242731709 NA Intergenic Intergenic -9979 NR_040366 100642166 NR_040366 ENSMUSG00000090015 Gm15446 OTTMUSG00000022004 predicted gene 15446 ncRNA common_peak1_118_923_-0.0046766711764139_9.84941070582785_0.301501030985839 chr14 64651948 64653582 + 0.301501030985839 NA intron (NM_001081177, intron 1 of 39) CpG 234 NM_001081177 16554 Mm.23611 NM_001081177 ENSMUSG00000060012 Kif13b 5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN kinesin family member 13B protein-coding common_peak2_118_923_-0.0046766711764139_9.84941070582785_0.301501030985839 chr17 25860752 25862683 + 0.301501030985839 NA promoter-TSS (NM_001163766) promoter-TSS (NM_001163766) -202 NM_001163766 106618 Mm.35470 NM_134124 ENSMUSG00000073434 Wdr90 3230401M21Rik|AI551153|mKIAA1924 WD repeat domain 90 protein-coding common_peak2_38_233_0.00257873002445574_7.87165408459563_0.301494979404485 chr19 41802085 41803594 + 0.301494979404485 NA promoter-TSS (NM_027667) promoter-TSS (NM_027667) -755 NM_027667 71085 Mm.21646 NM_027667 ENSMUSG00000025154 Arhgap19 4933411B03Rik|AI120128|AW546831|mFLJ00368 Rho GTPase activating protein 19 protein-coding common_peak1_38_233_0.00257873002445574_7.87165408459563_0.301494979404485 chr1 193247289 193247951 + 0.301494979404485 NA intron (NM_008288, intron 1 of 6) RLTR14-int|LTR|ERV1 -5260 NM_001044751 15483 Mm.28328 NM_008288 ENSMUSG00000016194 Hsd11b1 - hydroxysteroid 11-beta dehydrogenase 1 protein-coding common_peak1_38_235_-0.00969959975398105_7.87779324948485_0.301492996528637 chr11 89059936 89060691 + 0.301492996528637 NA promoter-TSS (NR_110336) promoter-TSS (NR_110336) 435 NM_019505 56077 Mm.153695 NM_019505 ENSMUSG00000000276 Dgke C87606|DAGK6|DGK diacylglycerol kinase, epsilon protein-coding common_peak1_121_948_0.000867485212218355_9.89069801962722_0.301487629554192 chr18 24019924 24021123 + 0.301487629554192 NA intron (NM_021559, intron 1 of 3) CpG 248 NM_021559 59057 Mm.417427 NM_021559 ENSMUSG00000051469 Zfp24 3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Zfp191|Znf191|Znf24|Znp191 zinc finger protein 24 protein-coding unique_peak2_39_241_-0.00111669845746221_7.91830488804586_0.301479576194271 chr3 126572181 126573937 + 0.301479576194271 NA Intergenic Intergenic -23892 NM_001293663 108058 Mm.255822 NM_023813 ENSMUSG00000053819 Camk2d 2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII calcium/calmodulin-dependent protein kinase II, delta protein-coding common_peak1_123_967_0.00104358983242392_9.91938503219081_0.301478647068577 chr7 128121128 128122513 + 0.301478647068577 NA Intergenic Lx8|LINE|L1 -7748 NM_021334 16411 Mm.22378 NM_021334 ENSMUSG00000030789 Itgax AI449405|Cd11c|Cr4|N418 integrin alpha X protein-coding common_peak2_39_243_-0.0129907987457543_7.92424193819001_0.301477722251171 chr4 11321545 11322706 + 0.301477722251171 NA promoter-TSS (NM_001081201) promoter-TSS (NM_001081201) 6 NM_001081201 381510 Mm.331486 NM_001081201 ENSMUSG00000045205 Dpy19l4 Gm1023|Narg3 dpy-19-like 4 (C. elegans) protein-coding common_peak1_125_986_0.00131519668174107_9.94756387279727_0.301470010411615 chr18 23954052 23955434 + 0.301470010411615 NA promoter-TSS (NM_027007) promoter-TSS (NM_027007) 55 NM_027007 69256 Mm.218343 NM_027007 ENSMUSG00000024276 Zfp397 2810411K16Rik|6720480F11Rik|AI461664 zinc finger protein 397 protein-coding common_peak1_40_248_0.00144133299734506_7.96072259856675_0.301466911936457-2 chr4 41123559 41124359 + 0.301466911936457 NA intron (NM_139236, intron 1 of 25) intron (NM_139236, intron 1 of 25) 380 NM_139236 230082 Mm.285797 NM_139236 ENSMUSG00000028430 Nol6 AA410091|Nrap nucleolar protein family 6 (RNA-associated) protein-coding common_peak1_40_248_0.00144133299734506_7.96072259856675_0.301466911936457 chr4 32141763 32142604 + 0.301466911936457 NA Intergenic Intergenic 178076 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak1_40_250_-0.0101002888853463_7.9664934095081_0.301465160766608 chr13 81175699 81176301 + 0.301465160766608 NA intron (NM_054053, intron 86 of 89) intron (NM_054053, intron 86 of 89) 211926 NR_015587 319983 Mm.343027 NR_015587 ENSMUSG00000097098 9330111N05Rik - RIKEN cDNA 9330111N05 gene ncRNA common_peak1_41_258_-0.0127213327017_8.0104476213357_0.301451641056929 chr4 150216287 150217201 + 0.301451641056929 NA Intergenic Intergenic -15609 NM_009802 12353 Mm.232523 NM_009802 ENSMUSG00000028972 Car6 Ca6|DOC1 carbonic anhydrase 6 protein-coding common_peak2_41_258_-0.0127213327017_8.0104476213357_0.301451641056929 chr13 37800978 37802574 + 0.301451641056929 NA Intergenic Intergenic -24262 NM_026830 68750 Mm.491109 NM_026830 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 protein-coding common_peak2_407_4171_0.000984268166758895_12.0270155766031_0.301446285621654 chr11 79518802 79526272 + 0.301446285621654 NA intron (NM_001077496, intron 1 of 1) intron (NM_001077496, intron 1 of 1) 1225 NM_001077496 216984 Mm.439665 NM_001077496 ENSMUSG00000093938 Evi2b Evi-2|Evi2 ecotropic viral integration site 2b protein-coding common_peak2_254_2349_-0.00266867744658583_11.1971107027291_0.301446252386529 chr9 31029194 31031571 + 0.301446252386529 NA promoter-TSS (NM_172765) promoter-TSS (NM_172765) -262 NM_001115130 235132 Mm.239355 NM_172765 ENSMUSG00000047412 Zbtb44 6030404E16Rik|Btbd15|E230011F09 zinc finger and BTB domain containing 44 protein-coding common_peak1_131_1044_0.00125734306534575_10.0299158985009_0.301445588532664 chr4 116806821 116808305 + 0.301445588532664 NA promoter-TSS (NM_026654) promoter-TSS (NM_026654) -4 NM_026654 68276 Mm.30534 NM_026654 ENSMUSG00000028688 Toe1 4930584N22Rik|4933424D16Rik|AI413517 target of EGR1, member 1 (nuclear) protein-coding common_peak2_131_1044_0.00125734306534575_10.0299158985009_0.301445588532664 chr4 11768202 11772791 + 0.301445588532664 NA intron (NM_019753, intron 2 of 17) intron (NM_019753, intron 2 of 17) 12339 NM_019753 12557 Mm.33402 NM_019753 ENSMUSG00000028217 Cdh17 HPT-1|HPT-1/LI cadherin 17 protein-coding common_peak2_42_265_-0.00955526524723815_8.05050480287757_0.301440482186315 chr4 53227962 53229113 + 0.301440482186315 NA Intergenic Intergenic -17659 NR_040665 78180 Mm.243847 NR_040665 ENSMUSG00000086947 4930522O17Rik - RIKEN cDNA 4930522O17 gene ncRNA unique_peak2_42_265_-0.00955526524723815_8.05050480287757_0.301440482186315 chr1 85111231 85112477 + 0.301440482186315 NA Intergenic Intergenic -2001 NM_213615 381287 Mm.487565 NM_213615 ENSMUSG00000089844 A530032D15Rik Gm1888 RIKEN cDNA A530032D15Rik gene protein-coding common_peak1_42_265_-0.00955526524723815_8.05050480287757_0.301440482186315 chr7 58657871 58658696 + 0.301440482186315 NA promoter-TSS (NM_009728) promoter-TSS (NM_009728) 81 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak2_42_265_-0.00955526524723815_8.05050480287757_0.301440482186315-2 chr5 100466818 100467798 + 0.301440482186315 NA intron (NM_172714, intron 4 of 12) B2_Mm2|SINE|B2 31265 NM_001115010 231506 Mm.212568 NM_172714 ENSMUSG00000035310 Lin54 AI461788 lin-54 homolog (C. elegans) protein-coding common_peak1_260_2411_0.000918154919052228_11.2364732693596_0.301435037175022 chr6 113653942 113656660 + 0.301435037175022 NA intron (NM_001113553, intron 2 of 11) intron (NM_001113553, intron 2 of 11) 16834 NM_001113553 108960 Mm.152142 NM_172161 ENSMUSG00000060477 Irak2 6330415L08Rik|AI649099|IRAK-2 interleukin-1 receptor-associated kinase 2 protein-coding common_peak2_135_1087_-0.00408964671709811_10.0854180178918_0.301429898558308 chr4 43577878 43579612 + 0.301429898558308 NA promoter-TSS (NM_172866) promoter-TSS (NM_172866) 10 NM_172866 242406 Mm.259311 NM_172866 ENSMUSG00000028468 Rgp1 1110029E03Rik|AI527196|F730001J03|mKIAA0258 RAB6A GEF compex partner 1 protein-coding common_peak1_136_1093_0.000940533742301852_10.0958672896637_0.30142697422162 chr11 62280644 62281999 + 0.30142697422162 NA promoter-TSS (NM_027198) promoter-TSS (NM_027198) 74 NM_027198 69747 Mm.141150 NM_027198 ENSMUSG00000014243 Zswim7 2410012H22Rik zinc finger SWIM-type containing 7 protein-coding common_peak2_137_1107_-0.00453453461603814_10.1114748987412_0.301422667039369 chr12 17543912 17546317 + 0.301422667039369 NA 5' UTR (NM_013614, exon 1 of 12) 5' UTR (NM_013614, exon 1 of 12) 241 NM_013614 18263 Mm.34102 NM_013614 ENSMUSG00000011179 Odc1 ODC ornithine decarboxylase, structural 1 protein-coding common_peak2_44_278_0.00205732573544459_8.12514997469691_0.301419847293349 chr13 37558695 37560473 + 0.301419847293349 NA Intergenic Intergenic 214239 NM_010745 17084 Mm.2639 NM_010745 ENSMUSG00000021423 Ly86 MD-1|MD1|ly86_tv2 lymphocyte antigen 86 protein-coding common_peak1_44_280_-0.00824768265629494_8.13030247889278_0.301418452473956-2 chr8 72330951 72331802 + 0.301418452473956 NA Intergenic Intergenic 12314 NM_008452 16598 Mm.26938 NM_008452 ENSMUSG00000055148 Klf2 Lklf Kruppel-like factor 2 (lung) protein-coding common_peak1_44_280_-0.00824768265629494_8.13030247889278_0.301418452473956 chr6 118138658 118139211 + 0.301418452473956 NA intron (NM_030165, intron 1 of 7) CpG 206 NM_030165 78752 Mm.300317 NM_030165 ENSMUSG00000042042 Csgalnact2 4632415D10Rik|Galnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding common_peak1_45_288_-0.00985256722081296_8.16999939889027_0.301407643229883 chr7 123377922 123378521 + 0.301407643229883 NA exon (NM_025304, exon 1 of 11) exon (NM_025304, exon 1 of 11) 239 NM_025304 30949 Mm.260527 NM_025304 ENSMUSG00000030763 Lcmt1 AL033290|LCMT-1|Lcmt leucine carboxyl methyltransferase 1 protein-coding common_peak1_45_288_-0.00985256722081296_8.16999939889027_0.301407643229883-2 chr7 126700500 126701202 + 0.301407643229883 NA exon (NM_009898, exon 8 of 11) exon (NM_009898, exon 8 of 11) 3369 NM_001301374 12721 Mm.290482 NM_009898 ENSMUSG00000030707 Coro1a Clabp|Lmb3|TACO|p57 coronin, actin binding protein 1A protein-coding common_peak1_142_1152_0.00101354893065597_10.1716835721171_0.301406660483978 chr3 130059906 130061386 + 0.301406660483978 NA exon (NM_207209, exon 1 of 24) exon (NM_207209, exon 1 of 24) 261 NM_207209 99683 Mm.192303 NM_207209 ENSMUSG00000001052 Sec24b AI605202|SEC24 Sec24 related gene family, member B (S. cerevisiae) protein-coding common_peak2_46_296_-0.0111880333747489_8.20872510411339_0.301397419258855 chr17 24695552 24696904 + 0.301397419258855 NA promoter-TSS (NM_027988) promoter-TSS (NM_027988) -6 NM_027988 71893 Mm.390971 NM_027988 ENSMUSG00000019320 Noxo1 2310034C04Rik|P41NOX|P41NOXA|P41NOXB|P41NOXC|Snx28|hslt NADPH oxidase organizer 1 protein-coding common_peak1_145_1186_-0.00417288206991984_10.2110177786069_0.301396488941481 chr9 32591919 32593544 + 0.301396488941481 NA Intergenic Intergenic -51279 NM_008026 14247 Mm.258908 NM_008026 ENSMUSG00000016087 Fli1 EWSR2|Fli-1|SIC-1|Sic1 Friend leukemia integration 1 protein-coding common_peak2_145_1186_-0.00417288206991984_10.2110177786069_0.301396488941481 chr2 153160881 153162348 + 0.301396488941481 NA intron (NM_133847, intron 1 of 17) intron (NM_133847, intron 1 of 17) 313 NM_133847 99237 Mm.330674 NM_133847 ENSMUSG00000068040 Tm9sf4 AA986553|AU045326|B930079E06|mKIAA0255 transmembrane 9 superfamily protein member 4 protein-coding common_peak1_47_301_0.00198303995337312_8.23939625930177_0.301390107339507 chr7 82648576 82649217 + 0.301390107339507 NA promoter-TSS (NM_177894) promoter-TSS (NM_177894) 282 NM_175317 101592 Mm.238020 NM_175317 ENSMUSG00000038563 Efl1 4932434J20Rik|6030468D11Rik|AI451340|AU019507|AU022896|D7Ertd791e|Eftud1 elongation factor like GPTase 1 protein-coding common_peak1_47_301_0.00198303995337312_8.23939625930177_0.301390107339507-2 chr8 72723115 72723991 + 0.301390107339507 NA intron (NM_009188, intron 1 of 18) CpG 283 NM_009188 20467 Mm.2137 NM_009188 ENSMUSG00000031622 Sin3b 2810430C10Rik transcriptional regulator, SIN3B (yeast) protein-coding unique_peak2_47_303_-0.00753973416513354_8.24415764636102_0.301388916886588 chr2 173348999 173350812 + 0.301388916886588 NA Intergenic Intergenic -73372 NM_022995 65112 Mm.73682 NM_022995 ENSMUSG00000038400 Pmepa1 2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai prostate transmembrane protein, androgen induced 1 protein-coding common_peak1_47_303_-0.00753973416513354_8.24415764636102_0.301388916886588 chr6 130031826 130032593 + 0.301388916886588 NA intron (NM_013793, intron 6 of 7) intron (NM_013793, intron 6 of 7) -5249 NM_053154 93971 Mm.14112 NM_053154 Klra19 Ly49s killer cell lectin-like receptor, subfamily A, member 19 protein-coding common_peak1_289_2750_-0.00235921173896614_11.4245608184467_0.30138552145256 chr5 30154479 30156601 + 0.30138552145256 NA promoter-TSS (NM_178878) promoter-TSS (NM_178878) 287 NM_001289798 231086 Mm.291463 NM_145558 ENSMUSG00000059447 Hadhb 4930479F15Rik|Mtpb|TP-beta hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit protein-coding unique_peak2_48_311_-0.00852598195156418_8.28113922788647_0.301379669310913 chr10 108177667 108180010 + 0.301379669310913 NA intron (NM_027892, intron 1 of 25) intron (NM_027892, intron 1 of 25) 16438 NM_027892 17931 Mm.422959 NM_027892 ENSMUSG00000019907 Ppp1r12a 1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1 protein phosphatase 1, regulatory (inhibitor) subunit 12A protein-coding unique_peak2_49_317_-0.000255451961614028_8.31275522930355_0.301371959964525 chr18 62168567 62170129 + 0.301371959964525 NA Intergenic Intergenic 10633 NM_007420 11555 Mm.5598 NM_007420 ENSMUSG00000045730 Adrb2 Adrb-2|Badm|Gpcr7 adrenergic receptor, beta 2 protein-coding common_peak1_156_1296_-0.00348712984605015_10.3392191993287_0.301365358231025 chr11 116023249 116024624 + 0.301365358231025 NA exon (NM_008211, exon 2 of 4) exon (NM_008211, exon 2 of 4) 568 NM_008211 15081 Mm.18516 NM_008211 ENSMUSG00000016559 H3f3b 9430068D06Rik|H3.3B H3 histone, family 3B protein-coding common_peak1_50_325_-0.00105737710362064_8.34819946567927_0.301363555305138 chr15 5244341 5245066 + 0.301363555305138 NA promoter-TSS (NM_008965) promoter-TSS (NM_008965) -516 NM_008965 19219 Mm.18509 NM_008965 ENSMUSG00000039942 Ptger4 EP4|Ptgerep4 prostaglandin E receptor 4 (subtype EP4) protein-coding common_peak2_50_325_-0.00105737710362064_8.34819946567927_0.301363555305138 chr2 156007459 156008761 + 0.301363555305138 NA promoter-TSS (NM_001145352) promoter-TSS (NM_001145352) -15 NM_025516 66366 Mm.141276 NM_025516 ENSMUSG00000005881 Ergic3 2310015B14Rik|AV318804|CGI-54|D2Ucla1|NY-BR-84|Sdbcag84 ERGIC and golgi 3 protein-coding common_peak1_51_333_-0.00167073664676387_8.38286892415067_0.301355553868532 chr19 24965889 24966948 + 0.301355553868532 NA Intergenic Intergenic -4802 NM_146097 226043 Mm.272127 NM_146097 ENSMUSG00000024878 Cbwd1 AV349248|BC018472 COBW domain containing 1 protein-coding common_peak2_164_1373_0.00125924572110137_10.4247959116787_0.30134607609964 chr14 31018175 31020932 + 0.30134607609964 NA promoter-TSS (NM_153547) promoter-TSS (NM_153547) 415 NM_001081251 66923 Mm.27913 NM_025847 ENSMUSG00000042323 Pbrm1 2610016F04Rik|AI507524|BAF180|Pb1 polybromo 1 protein-coding common_peak2_164_1377_-0.00293463816509032_10.4268928536217_0.301345616681075 chr15 82353351 82355408 + 0.301345616681075 NA promoter-TSS (NM_025987) promoter-TSS (NM_025987) -88 NM_025987 67130 Mm.27570 NM_025987 ENSMUSG00000022450 Ndufa6 14kDa|2700038D15Rik|B230217P19Rik NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14) protein-coding common_peak1_165_1387_-0.00267367222355652_10.4374550164665_0.301343339471969 chrX 163957488 163959366 + 0.301343339471969 NA 5' UTR (NM_178794, exon 1 of 5) 5' UTR (NM_178794, exon 1 of 5) 239 NM_009453 22184 Mm.426178 NM_009453 ENSMUSG00000031370 Zrsr2 35kDa|5031411E02Rik|A230052C13Rik|C77286|U2af1-rs2|URP zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 protein-coding common_peak1_321_3126_-0.00195427937970294_11.6095863642352_0.301342737739629 chr12 104054760 104057087 + 0.301342737739629 NA Intergenic Intergenic -11480 NM_026535 68054 Mm.20286 NM_026535 ENSMUSG00000041567 Serpina12 4632419J12Rik serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12 protein-coding common_peak2_53_348_0.00173665181629801_8.4479515521178_0.30134154131036 chr8 105965403 105966459 + 0.30134154131036 NA non-coding (NR_045594, exon 1 of 24) non-coding (NR_045594, exon 1 of 24) 184 NM_001253804 20498 Mm.292447 NM_009195 ENSMUSG00000017765 Slc12a4 AW546649|KCC1|RBCKCC1 solute carrier family 12, member 4 protein-coding common_peak1_53_350_-0.00650734227860994_8.45207354916526_0.301340649906021 chr1 92828311 92829301 + 0.301340649906021 NA Intergenic Intergenic -2880 NM_016696 14733 Mm.297976 NM_016696 ENSMUSG00000034220 Gpc1 AI462976 glypican 1 protein-coding common_peak2_55_364_0.00142440743690209_8.51246485748583_0.301327865772151-2 chr7 141122695 141123765 + 0.301327865772151 NA Intergenic Intergenic -5424 NM_178381 71345 Mm.235813 NM_178381 ENSMUSG00000054662 Ano9 5430425C04Rik|Tmem16j|Tp53i5|Trp53i5 anoctamin 9 protein-coding common_peak2_55_364_0.00142440743690209_8.51246485748583_0.301327865772151 chr18 76929328 76930657 + 0.301327865772151 NA promoter-TSS (NM_025409) promoter-TSS (NM_025409) -35 NM_025409 66191 Mm.28593 NM_025409 ENSMUSG00000090000 Ier3ip1 1110057H19Rik|AI644142|AL022842|AL022863|AV026606 immediate early response 3 interacting protein 1 protein-coding common_peak1_173_1470_-0.00317138940262041_10.5209958365535_0.301325635225164 chr12 55820169 55821730 + 0.301325635225164 NA 5' UTR (NM_001286263, exon 1 of 42) 5' UTR (NM_001286263, exon 1 of 42) 567 NM_019994 56784 Mm.292180 NM_019994 ENSMUSG00000021027 Ralgapa1 2310003F20Rik|4930400K19Rik|AI563624|GRIPE|Garnl1|Tulip1|mKIAA0884 Ral GTPase activating protein, alpha subunit 1 protein-coding common_peak1_337_3311_0.000939202216441615_11.6939565586075_0.301324988149917 chr8 123064084 123066612 + 0.301324988149917 NA promoter-TSS (NM_153176) promoter-TSS (NM_153176) -160 NM_153176 234847 Mm.292075 NM_153176 ENSMUSG00000000738 Spg7 AI452278|AU015315|Cmar|PGN spastic paraplegia 7 homolog (human) protein-coding common_peak1_56_372_0.00146689929493604_8.54376526990271_0.301321468558256 chr19 36409668 36410573 + 0.301321468558256 NA intron (NM_029508, intron 1 of 8) CpG 31053 NM_029508 76073 Mm.259180 NM_029508 ENSMUSG00000024805 Pcgf5 0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127 polycomb group ring finger 5 protein-coding common_peak2_56_374_-0.00624806583306992_8.54762275246671_0.301320688175121 chr6 89042178 89043855 + 0.301320688175121 NA Intergenic Intergenic -53099 NM_175017 232217 Mm.281744 NM_175017 ENSMUSG00000055403 4933427D06Rik - RIKEN cDNA 4933427D06 gene ncRNA common_peak1_346_3420_0.000727607523455021_11.7405661925296_0.301315590465493 chr5 125388497 125390838 + 0.301315590465493 NA intron (NM_019639, intron 1 of 1) CpG 350 NM_019639 22190 Mm.331 NM_019639 ENSMUSG00000008348 Ubc 2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb ubiquitin C protein-coding common_peak2_57_380_0.00162843820560354_8.57446140659612_0.301315340346708 chr19 29453393 29455137 + 0.301315340346708 NA intron (NM_021396, intron 4 of 5) intron (NM_021396, intron 4 of 5) 43346 NM_021396 58205 Mm.116737 NM_021396 ENSMUSG00000016498 Pdcd1lg2 B7-DC|Btdc|F730015O22Rik|PD-L2 programmed cell death 1 ligand 2 protein-coding common_peak2_179_1528_0.00103056857653883_10.5788879756491_0.301314033933796 chr1 190927683 190929619 + 0.301314033933796 NA non-coding (NR_037579, exon 1 of 8) non-coding (NR_037579, exon 1 of 8) 146 NR_037579 52477 Mm.289914 NM_021421 ENSMUSG00000026634 Angel2 2610307I21Rik|5730410O10Rik|AI845692|D1Ertd396e|D1Ertd654e angel homolog 2 protein-coding common_peak2_180_1539_0.000492679894097847_10.5889609755293_0.30131200508785 chr17 94749057 94751107 + 0.30131200508785 NA promoter-TSS (NM_176917) promoter-TSS (NM_176917) -18 NR_024720 77022 Mm.440259 NR_024720 ENSMUSG00000098090 2700099C18Rik 9430041D22Rik NDC80 homolog, kinetochore complex component pseudogene pseudo common_peak2_180_1543_-0.00324972179171823_10.5908321763722_0.301311639316226 chr16 13670959 13673262 + 0.301311639316226 NA promoter-TSS (NM_025653) promoter-TSS (NM_025653) 90 NM_025653 67118 Mm.223689 NM_025653 ENSMUSG00000022684 Bfar 3010001A07Rik|3110001I22Rik|AI666707|AW107665|Bar|Rnf47 bifunctional apoptosis regulator protein-coding common_peak1_58_389_-0.00180390870778524_8.60642835939572_0.301308747012565 chr1 181852237 181852979 + 0.301308747012565 NA Intergenic Intergenic -10207 NM_133815 98386 Mm.4538 NM_133815 ENSMUSG00000004880 Lbr AI505894|ic lamin B receptor protein-coding common_peak1_58_391_-0.00918343907338226_8.61011812457852_0.301308033180455 chr15 80598922 80600245 + 0.301308033180455 NA intron (NM_001289442, intron 1 of 7) intron (NM_001289442, intron 1 of 7) -23900 NM_010815 17444 Mm.12947 NM_010815 ENSMUSG00000042351 Grap2 GRAP-2|GRB2L|GRBLG|GRID|Gads|GrbX|Grf40|GrpL|Mona|P38 GRB2-related adaptor protein 2 protein-coding common_peak1_59_399_-0.00858744599066519_8.63956246677939_0.301302451495429 chr7 24610434 24611294 + 0.301302451495429 NA promoter-TSS (NM_001102613) promoter-TSS (NM_001102613) -464 NM_001102613 232970 Mm.333663 NM_001102613 ENSMUSG00000074277 Phldb3 EG232970|ENSMUSG00000061511|Gm10102 pleckstrin homology like domain, family B, member 3 protein-coding common_peak2_185_1595_-0.00281590414839883_10.6388369841481_0.301302451440822 chrX 101638804 101642261 + 0.301302451440822 NA intron (NM_001290535, intron 1 of 21) intron (NM_001290535, intron 1 of 21) 314 NM_001290535 108155 Mm.487332 NM_139144 ENSMUSG00000034160 Ogt 1110038P24Rik|4831420N21Rik|AI115525|Ogtl O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) protein-coding common_peak2_368_3688_0.000698223677174425_11.8493631855334_0.301294845265783 chr10 42500951 42503563 + 0.301294845265783 NA 5' UTR (NM_017472, exon 1 of 4) 5' UTR (NM_017472, exon 1 of 4) 203 NM_017472 54198 Mm.277870 NM_017472 ENSMUSG00000019804 Snx3 SDP3 sorting nexin 3 protein-coding common_peak1_61_413_-0.000192441578661828_8.69339073670999_0.301292567966324 chr16 91596617 91597811 + 0.301292567966324 NA intron (NM_030018, intron 1 of 6) intron (NM_030018, intron 1 of 6) 466 NM_030018 77975 Mm.290341 NM_030018 ENSMUSG00000022964 Tmem50b AU015466|AU019872|B230114J08Rik transmembrane protein 50B protein-coding common_peak1_61_415_-0.00714520222043014_8.69686711703088_0.301291934497988 chr11 107421703 107422789 + 0.301291934497988 NA intron (NM_145823, intron 1 of 9) intron (NM_145823, intron 1 of 9) 48474 NM_145823 71795 Mm.397413 NM_145823 ENSMUSG00000040430 Pitpnc1 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|rdgB-beta phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding common_peak1_61_415_-0.00714520222043014_8.69686711703088_0.301291934497988-2 chr5 36669526 36670554 + 0.301291934497988 NA intron (NM_001081232, intron 2 of 8) intron (NM_001081232, intron 2 of 8) 25981 NM_001081232 320661 Mm.26480 NM_177221 ENSMUSG00000029190 D5Ertd579e 9030221A05Rik|A930018H20Rik|Kiaa0232 DNA segment, Chr 5, ERATO Doi 579, expressed protein-coding common_peak1_193_1675_0.00114424085041342_10.7113785541246_0.301289121264019 chr11 49083121 49085796 + 0.301289121264019 NA intron (NM_001271677, intron 1 of 2) MTD|LTR|ERVL-MaLR -2559 NM_001271676 15953 Mm.24769 NM_008330 ENSMUSG00000078920 Ifi47 47kDa|IRG-47|Ifggc1|Igrd|Iigp4|Iipg4|Irgd interferon gamma inducible protein 47 protein-coding common_peak2_63_431_-0.00540961666558815_8.75218269383067_0.301282199252416 chr17 29002596 29004896 + 0.301282199252416 NA intron (NM_134115, intron 1 of 13) intron (NM_134115, intron 1 of 13) 4191 NM_134115 106504 Mm.439986 NM_134115 ENSMUSG00000024006 Stk38 5830476G13Rik|9530097A09Rik|AA617404|Ndr1 serine/threonine kinase 38 protein-coding common_peak1_64_438_-0.0011626092024617_8.77749582493413_0.301277598044999 chr3 153943808 153944625 + 0.301277598044999 NA intron (NM_007382, intron 1 of 11) intron (NM_007382, intron 1 of 11) 427 NM_007382 11364 Mm.10530 NM_007382 ENSMUSG00000062908 Acadm AU018656|MCAD acyl-Coenzyme A dehydrogenase, medium chain protein-coding common_peak1_201_1765_-0.0028091228566538_10.7848650662201_0.301276194363989 chr1 34841440 34843753 + 0.301276194363989 NA intron (NM_174997, intron 1 of 6) CpG 454 NM_001160235 214469 Mm.120151 NM_174997 ENSMUSG00000037503 Fam168b mKIAA4042 family with sequence similarity 168, member B protein-coding common_peak2_67_463_-0.00122011178068959_8.85737093923723_0.30126424300273 chr10 117745476 117747063 + 0.30126424300273 NA promoter-TSS (NM_029875) promoter-TSS (NM_029875) 89 NM_029875 215436 Mm.256753 NM_029875 ENSMUSG00000060181 Slc35e3 9330166G04Rik|AI481200 solute carrier family 35, member E3 protein-coding common_peak2_211_1868_0.000915534070665913_10.8685086207805_0.301262362976366 chr18 67774020 67776623 + 0.301262362976366 NA TTS (NR_045376) TTS (NR_045376) 445 NM_001039088 72124 Mm.307315 NM_028112 ENSMUSG00000079614 Seh1l 2610007A16Rik|AW540070|SEC13L|SEH1A|SEH1B|Seh1 SEH1-like (S. cerevisiae protein-coding unique_peak2_68_473_-0.00614792865146363_8.88566928457253_0.301259781146526 chr6 31071435 31073954 + 0.301259781146526 NA Intergenic Intergenic -9601 NR_029532 387223 NR_029532 ENSMUSG00000065604 Mir29b-1 Mirn29b|Mirn29b-1|mir-29b-1 microRNA 29b-1 ncRNA common_peak1_68_473_-0.00614792865146363_8.88566928457253_0.301259781146526 chr15 66854159 66855493 + 0.301259781146526 NA Intergenic Intergenic -22997 NM_009192 20491 Mm.7601 NM_009192 ENSMUSG00000022372 Sla Slap|Slap-1 src-like adaptor protein-coding common_peak2_69_481_-0.00483131052007124_8.91047368096993_0.301255955372939 chr11 60129840 60131468 + 0.301255955372939 NA intron (NM_009021, intron 1 of 5) intron (NM_009021, intron 1 of 5) -9428 NM_001037764 19377 Mm.296366 NM_009021 ENSMUSG00000062115 Rai1 Gt1 retinoic acid induced 1 protein-coding common_peak1_218_1944_0.000899102665359308_10.9260039912062_0.301253283325054 chr10 13192040 13193777 + 0.301253283325054 NA intron (NM_181470, intron 1 of 10) CpG 229 NM_181470 353258 Mm.117581 NM_181470 ENSMUSG00000019814 Ltv1 2610020N02Rik LTV1 ribosome biogenesis factor protein-coding common_peak2_222_1988_0.000656313120659391_10.9581557173941_0.301248343831142 chr4 155811451 155813772 + 0.301248343831142 NA exon (NM_207678, exon 1 of 11) exon (NM_207678, exon 1 of 11) 122 NM_207678 56036 Mm.23492 NM_018856 ENSMUSG00000029068 Ccnl2 1700010A01Rik|1810019L15Rik|2010319M22Rik|AA409936|AW261738|Ania-6b|HCLA-150|Pcee|SB138 cyclin L2 protein-coding common_peak1_71_498_-0.00498602109188084_8.96040299479132_0.301248234133792 chr17 84465771 84466903 + 0.301248234133792 NA promoter-TSS (NM_183021) promoter-TSS (NM_183021) -129 NM_183021 240174 Mm.246767 NM_177826 ENSMUSG00000024251 Thada 6530405K19|A930021O22|AU019899|BC052885|GITA thyroid adenoma associated protein-coding common_peak2_224_2014_-0.00227989897237713_10.9754241739291_0.301245740569571 chr1 138962574 138964846 + 0.301245740569571 NA promoter-TSS (NM_001166501) promoter-TSS (NM_001166501) 1 NM_001166501 329260 Mm.337604 NM_181347 ENSMUSG00000056268 Dennd1b 4632404N19Rik|4930467M19Rik|6820401H01Rik|F730008N07Rik DENN/MADD domain containing 1B protein-coding common_peak1_72_505_-0.000674548308682077_8.98265630053997_0.301244780309252 chr16 8671342 8672349 + 0.301244780309252 NA intron (NM_025821, intron 1 of 3) CpG 308 NM_025821 52502 Mm.142095 NM_025821 ENSMUSG00000008393 Carhsp1 1200011K09Rik|Crhsp-24|D16Ertd465e calcium regulated heat stable protein 1 protein-coding common_peak2_73_513_0.000771413203887406_9.00601025579582_0.301241434101509 chr16 35768536 35770942 + 0.301241434101509 NA promoter-TSS (NM_175111) promoter-TSS (NM_175111) -383 NM_153550 224132 Mm.24094 NM_153550 ENSMUSG00000022848 Dirc2 RCC4 disrupted in renal carcinoma 2 (human) protein-coding common_peak2_75_532_-0.00440289698957308_9.05579027426439_0.301234273437243 chr11 68203181 68205873 + 0.301234273437243 NA 3' UTR (NM_018768, exon 8 of 8) 3' UTR (NM_018768, exon 8 of 8) -16365 NR_105833 102465219 NR_105833 ENSMUSG00000099174 Mir6406 Gm27981|mmu-mir-6406 microRNA 6406 ncRNA common_peak1_459_4834_0.000490838980338637_12.2395455938544_0.301232076648197 chr3 90585958 90590240 + 0.301232076648197 NA Intergenic MTB_Mm|LTR|ERVL-MaLR -2148 NM_001195760 628324 Mm.33816 NM_001195760 ENSMUSG00000094018 S100a2 CaN19|EG628324|S100L S100 calcium binding protein A2 protein-coding common_peak2_77_548_-0.00110657821098137_9.10010904989971_0.301227942128023 chr16 8671133 8672623 + 0.301227942128023 NA intron (NM_025821, intron 1 of 3) CpG 275 NM_025821 52502 Mm.142095 NM_025821 ENSMUSG00000008393 Carhsp1 1200011K09Rik|Crhsp-24|D16Ertd465e calcium regulated heat stable protein 1 protein-coding common_peak2_81_584_-0.00423723821898392_9.19017419536127_0.301216068729058 chr4 120815112 120816584 + 0.301216068729058 NA intron (NM_001048168, intron 1 of 9) intron (NM_001048168, intron 1 of 9) 9893 NM_001277095 18046 Mm.435590 NM_008692 ENSMUSG00000032897 Nfyc - nuclear transcription factor-Y gamma protein-coding common_peak2_254_2348_-0.00205463400642003_11.196803681009_0.301215038054034 chr4 144891065 144895771 + 0.301215038054034 NA 5' UTR (NM_011303, exon 1 of 6) 5' UTR (NM_011303, exon 1 of 6) 281 NM_011303 20148 Mm.14063 NM_011303 ENSMUSG00000066026 Dhrs3 Rsdr1|retSDR1 dehydrogenase/reductase (SDR family) member 3 protein-coding common_peak1_84_611_-0.0057459948401597_9.25451484527257_0.301207839452798 chr7 43579097 43580480 + 0.301207839452798 NA intron (NM_172482, intron 1 of 3) intron (NM_172482, intron 1 of 3) 202 NM_172482 210105 Mm.234422 NM_172482 ENSMUSG00000030469 Zfp719 8030458J18|9430094P17Rik|C630016O21Rik|mszf6 zinc finger protein 719 protein-coding common_peak2_84_611_-0.0057459948401597_9.25451484527257_0.301207839452798 chr10 20119724 20121251 + 0.301207839452798 NA intron (NM_008580, intron 23 of 29) intron (NM_008580, intron 23 of 29) -28433 NM_008635 17761 Mm.20928 NM_008635 ENSMUSG00000019996 Map7 E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste microtubule-associated protein 7 protein-coding common_peak1_86_626_0.000476197863813255_9.29255973173395_0.301203297550935 chr9 114780994 114782255 + 0.301203297550935 NA intron (NM_001252479, intron 1 of 3) CpG 369 NM_133978 102545 Mm.35600 NM_133978 ENSMUSG00000032436 Cmtm7 AI481279|Cklfsf7|LNV CKLF-like MARVEL transmembrane domain containing 7 protein-coding common_peak1_87_637_-0.00439024869820592_9.31521748941577_0.301200574818071 chr6 47744137 47745097 + 0.301200574818071 NA promoter-TSS (NR_002841).5 promoter-TSS (NR_002841).5 -386 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA rRNA common_peak1_88_646_-0.00460353322831963_9.33532013537835_0.30119819648731 chr2 119288311 119289242 + 0.30119819648731 NA promoter-TSS (NM_172269) promoter-TSS (NM_172269) 34 NM_172269 228545 Mm.294761 NM_172269 ENSMUSG00000034216 Vps18 9930024E13Rik VPS18 CORVET/HOPS core subunit protein-coding common_peak2_285_2698_0.000593396301932003_11.3985059596178_0.301190905071077 chr14 121877693 121880547 + 0.301190905071077 NA promoter-TSS (NR_131002) promoter-TSS (NR_131002) 288 NR_130999 78312 Mm.188743 NR_130999 ENSMUSG00000102112 1810041H14Rik - RIKEN cDNA 1810041H14 gene ncRNA common_peak1_92_682_-0.00492504740249977_9.41327924458884_0.301189311335361 chr3 69205986 69207132 + 0.301189311335361 NA Intergenic Intergenic -15860 NM_027843 71619 Mm.98122 NM_027843 ENSMUSG00000098207 Arl14 9130014L17Rik|Arf7 ADP-ribosylation factor-like 14 protein-coding common_peak2_95_707_-0.00060545961818903_9.4673028202739_0.30118345662424 chr11 43433470 43434882 + 0.30118345662424 NA intron (NM_198936, intron 1 of 15) intron (NM_198936, intron 1 of 15) 445 NM_198936 193116 Mm.28200 NM_148673 ENSMUSG00000020409 Slu7 AU018913|D11Ertd730e|D3Bwg0878e SLU7 splicing factor homolog (S. cerevisiae) protein-coding common_peak1_97_725_-0.000337189898710122_9.5036571430464_0.301179649184145 chr13 74617134 74618409 + 0.301179649184145 NA Intergenic Intergenic -22101 NM_030711 80898 Mm.83526 NM_030711 ENSMUSG00000021583 Erap1 Arts1|ERAAP|PILSA|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding common_peak2_103_782_-0.00422263027739689_9.61075718215234_0.301168925450052 chr5 110230228 110232075 + 0.301168925450052 NA 5' UTR (NM_001253814, exon 1 of 13) 5' UTR (NM_001253814, exon 1 of 13) 147 NM_027922 71782 Mm.288442 NM_027922 ENSMUSG00000029501 Ankle2 1110001J12Rik|AI661024|D5Ertd585e ankyrin repeat and LEM domain containing 2 protein-coding common_peak2_110_847_-0.00400228719850304_9.72591931096395_0.301158257479058 chr17 46201972 46203640 + 0.301158257479058 NA promoter-TSS (NM_030715) promoter-TSS (NM_030715) -49 NM_028198 72322 Mm.275039 NM_028198 ENSMUSG00000067150 Xpo5 2410004H11Rik|2700038C24Rik|AI648907|AW549301|Exp5|RanBp21|mKIAA1291 exportin 5 protein-coding common_peak1_111_854_8.76261737658979e-06_9.73978499108195_0.301157056666133 chr1 191906722 191907516 + 0.301157056666133 NA exon (NM_009579, exon 1 of 2) exon (NM_009579, exon 1 of 2) 338 NM_009579 22782 Mm.9024 NM_009579 ENSMUSG00000037434 Slc30a1 AI839647|C130040I11Rik|Znt1 solute carrier family 30 (zinc transporter), member 1 protein-coding common_peak1_112_863_0.000631996008932489_9.75520350016793_0.301155732347699 chr13 90088897 90090280 + 0.301155732347699 NA promoter-TSS (NM_028012) promoter-TSS (NM_028012) 20 NM_028012 108138 Mm.37531 NM_028012 ENSMUSG00000021615 Xrcc4 2310057B22Rik|AW413319|AW545101 X-ray repair complementing defective repair in Chinese hamster cells 4 protein-coding common_peak2_113_873_-0.000378438764068179_9.77130025011856_0.301154292889419 chrX 157490160 157492835 + 0.301154292889419 NA intron (NM_009214, intron 1 of 10) CpG 549 NM_009214 20603 Mm.18652 NM_009214 ENSMUSG00000071708 Sms AI427066|Gy|SPMSY|SpmST|gyro spermine synthase protein-coding common_peak2_125_989_-0.00306324382883361_9.94975309305256_0.301139832412055 chr1 132315579 132318160 + 0.301139832412055 NA intron (NM_001195025, intron 1 of 7) intron (NM_001195025, intron 1 of 7) 744 NM_001195025 74137 Mm.100666 NM_028778 ENSMUSG00000009772 Nuak2 1200013B22Rik|Omphk2|Snark|mKIAA0537 NUAK family, SNF1-like kinase, 2 protein-coding common_peak1_125_989_-0.00306324382883361_9.94975309305256_0.301139832412055 chr17 83987478 83989726 + 0.301139832412055 NA Intergenic (GA)n|Simple_repeat|Simple_repeat -9950 NR_130994 78148 Mm.243918 NR_130994 8430430B14Rik - RIKEN cDNA 8430430B14 gene ncRNA common_peak2_126_997_-0.000685311163215019_9.96255334975565_0.301138841403015 chr16 43653826 43656880 + 0.301138841403015 NA intron (NM_001146325, intron 3 of 3) intron (NM_001146325, intron 3 of 3) 8831 NM_001146325 100043314 Mm.390896 NM_001146325 ENSMUSG00000071552 Tigit ENSMUSG00000071552|Vstm3 T cell immunoreceptor with Ig and ITIM domains protein-coding common_peak2_129_1026_-0.000693634798942355_10.0038736489187_0.301135766365168 chr16 30387606 30389934 + 0.301135766365168 NA promoter-TSS (NM_001128094) promoter-TSS (NM_001128094) -240 NM_001128096 224088 Mm.8924 NM_001128094 ENSMUSG00000022533 Atp13a3 AU022875|Gm1745|Gm541|Gm542 ATPase type 13A3 protein-coding common_peak2_130_1035_0.000278974160318413_10.0169477747667_0.301134847063234 chr10 20863827 20865996 + 0.301134847063234 NA Intergenic MT2A|LTR|ERVL -87636 NM_026203 52906 Mm.253280 NM_026203 ENSMUSG00000019986 Ahi1 1700015F03Rik|Ahi-1|D10Bwg0629e Abelson helper integration site 1 protein-coding common_peak1_133_1066_-0.00218844948834551_10.0582502360803_0.301131894888742 chr9 80281454 80283615 + 0.301131894888742 NA intron (NM_001039546, intron 22 of 32) intron (NM_001039546, intron 22 of 32) 117500 NM_001039546 17920 Mm.4040 NM_008662 ENSMUSG00000033577 Myo6 BC029719|Tlc|sv myosin VI protein-coding common_peak2_133_1066_-0.00218844948834551_10.0582502360803_0.301131894888742 chr11 53844646 53846846 + 0.301131894888742 NA intron (NR_033332, intron 2 of 3) intron (NR_033332, intron 2 of 3) 13510 NR_033332 622459 Mm.479656 NR_033332 ENSMUSG00000081769 Gm12216 602-19-115|OTTMUSG00000005650 predicted gene 12216 ncRNA common_peak2_134_1076_-0.00248938082629202_10.0715578441311_0.301130947430643 chr1 54839501 54843422 + 0.301130947430643 NA intron (NM_001081433, intron 1 of 27) L1_Mus3|LINE|L1 84926 NM_001081433 329154 Mm.397910 NM_001081433 ENSMUSG00000052331 Ankrd44 4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B ankyrin repeat domain 44 protein-coding common_peak1_141_1145_-0.00261947172353238_10.1610815928951_0.301124861215411 chr5 45856550 45858144 + 0.301124861215411 NA promoter-TSS (NM_172153) promoter-TSS (NM_172153) 193 NM_178142 209707 Mm.71498 NM_172153 ENSMUSG00000015882 Lcorl Mlr1 ligand dependent nuclear receptor corepressor-like protein-coding common_peak2_142_1155_-0.00273533591825093_10.1735580145416_0.30112403951376 chr1 136683280 136687085 + 0.30112403951376 NA intron (NR_045325, intron 1 of 2) intron (NR_045325, intron 1 of 2) 1553 NR_045325 100503460 Mm.30630 NR_045324 ENSMUSG00000097113 Gm19705 - predicted gene, 19705 ncRNA common_peak1_146_1193_-0.000576368200837507_10.2212989371644_0.301120966442265 chr11 17257334 17258519 + 0.301120966442265 NA intron (NM_020558, intron 1 of 4) intron (NM_020558, intron 1 of 4) 308 NM_020558 57316 Mm.287982 NM_020558 ENSMUSG00000000581 C1d 1110036E10Rik|AI875855|SUN-CoR C1D nuclear receptor co-repressor protein-coding common_peak1_148_1212_0.000561166987111505_10.2446444186141_0.301119540919476 chr3 96171647 96173106 + 0.301119540919476 NA promoter-TSS (NM_153053) promoter-TSS (NM_153053) -130 NM_153053 107701 Mm.219671 NM_153053 ENSMUSG00000068856 Sf3b4 SF3b49|SF3b50|Sap49 splicing factor 3b, subunit 4 protein-coding common_peak2_152_1255_-0.0028154556108877_10.2932130210862_0.301116542992178 chr9 45943982 45946623 + 0.301116542992178 NA exon (NM_001289668, exon 15 of 27) exon (NM_001289668, exon 15 of 27) -5712 NR_106055 102465659 NR_106055 ENSMUSG00000098327 Mir7087 Gm27273|mmu-mir-7087 microRNA 7087 ncRNA common_peak2_489_5228_-0.00072521987148022_12.3519567449111_0.301113082423308 chr17 73948028 73954023 + 0.301113082423308 NA promoter-TSS (NM_011723) promoter-TSS (NM_011723) -829 NM_011723 22436 Mm.11223 NM_011723 ENSMUSG00000024066 Xdh XO|Xor|Xox-1|Xox1 xanthine dehydrogenase protein-coding common_peak1_162_1354_-0.000232692319864114_10.4039607900813_0.301110153377271 chr2 180966323 180967889 + 0.301110153377271 NA promoter-TSS (NM_001177707) promoter-TSS (NM_001177707) -119 NM_145760 228998 Mm.33765 NM_145760 ENSMUSG00000027575 Arfgap1 AI115377|Arf1gap ADP-ribosylation factor GTPase activating protein 1 protein-coding common_peak1_173_1469_-0.00219029787151825_10.520505290788_0.301103930714041 chr5 112286993 112288977 + 0.301103930714041 NA intron (NM_009419, intron 1 of 6) intron (NM_009419, intron 1 of 6) 11278 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_176_1500_-0.0020473404255803_10.5506845914079_0.301102402213693 chr8 71922167 71923836 + 0.301102402213693 NA intron (NM_133358, intron 1 of 3) CpG 176 NM_133358 170938 Mm.480419 NM_133358 ENSMUSG00000066880 Zfp617 Zfps11-6 zinc finger protein 617 protein-coding common_peak1_182_1560_0.000399145222347741_10.6084543945891_0.301099571840629 chr10 79908632 79909590 + 0.301099571840629 NA promoter-TSS (NM_001163276) promoter-TSS (NM_001163276) -173 NM_198107 216154 Mm.260089 NM_198107 ENSMUSG00000013833 Med16 95kDa|A630083L04|Thrap5|Trap95 mediator complex subunit 16 protein-coding common_peak2_185_1592_-0.000101519451362719_10.6374797917996_0.301098173762137 chr19 6060399 6062866 + 0.301098173762137 NA exon (NM_013859, exon 1 of 1) exon (NM_013859, exon 1 of 1) 425 NM_013859 29805 Mm.2310 NM_013859 ENSMUSG00000075227 Znhit2 C11orf5|Fon|ORF6|Znhit2-ps zinc finger, HIT domain containing 2 protein-coding common_peak1_187_1615_-0.00185577295306416_10.6572835962753_0.301097244734696 chr17 88440712 88442278 + 0.301097244734696 NA intron (NM_180974, intron 1 of 5) CpG 783 NM_180974 14236 Mm.112824 NM_180974 ENSMUSG00000034998 Foxn2 3230402J05Rik|6030465J18Rik|Fkh19|Foxn1|HTLF forkhead box N2 protein-coding common_peak2_194_1689_-0.00175849468336686_10.7219282838279_0.301094297483539 chr4 41347203 41349821 + 0.301094297483539 NA promoter-TSS (NM_001290454) promoter-TSS (NM_001290454) -484 NM_001290454 67123 Mm.289795 NM_023305 ENSMUSG00000028437 Ubap1 2700092A01Rik|NAG20|UBAP-1|Ubap ubiquitin-associated protein 1 protein-coding common_peak1_204_1794_-0.000219276766665999_10.8096584903271_0.301090499216163 chr13 44732721 44734605 + 0.301090499216163 NA intron (NM_001205044, intron 2 of 18) CpG 2392 NM_001205043 16468 Mm.25059 NM_021878 ENSMUSG00000038518 Jarid2 Jmj|jumonji jumonji, AT rich interactive domain 2 protein-coding common_peak1_231_2090_-0.00147709851794353_11.0292387973306_0.301081957195787 chr19 10524592 10526196 + 0.301081957195787 NA promoter-TSS (NM_025333) promoter-TSS (NM_025333) 150 NM_172302 269061 Mm.490260 NM_172302 ENSMUSG00000034820 Cpsf7 5730453I16Rik|AL022757|C330017N18Rik cleavage and polyadenylation specific factor 7 protein-coding common_peak2_237_2154_0.000212527449537703_11.0735784177012_0.301080389546151 chr11 55468114 55471281 + 0.301080389546151 NA promoter-TSS (NM_013716) promoter-TSS (NM_013716) -55 NM_013716 27041 Mm.39631 NM_013716 ENSMUSG00000018583 G3bp1 AI849976|B430204O07|C87777|G3bp|mKIAA4115 GTPase activating protein (SH3 domain) binding protein 1 protein-coding common_peak1_253_2333_0.000234159653050625_11.1887059255339_0.301076523889782 chr7 128062098 128065848 + 0.301076523889782 NA intron (NM_001082960, intron 1 of 29) PB1D10|SINE|Alu 1333 NM_008401 16409 Mm.262106 NM_008401 ENSMUSG00000030786 Itgam CD11b/CD18|CR3|CR3A|Cd11b|F730045J24Rik|Ly-40|MAC1|Mac-1|Mac-1a integrin alpha M protein-coding common_peak1_290_2759_-0.000979672148838873_11.4299627155911_0.301069355323128 chr11 115153025 115155298 + 0.301069355323128 NA promoter-TSS (NM_021411) promoter-TSS (NM_021411) -17 NM_021411 58222 Mm.143789 NM_021411 ENSMUSG00000020732 Rab37 B230331O03Rik|B230354I04Rik RAB37, member RAS oncogene family protein-coding common_peak2_350_3470_7.68320857833515e-05_11.7611740658715_0.301061280385378 chr12 69578714 69583649 + 0.301061280385378 NA exon (NM_001033236, exon 4 of 6) exon (NM_001033236, exon 4 of 6) 1847 NM_001033236 207965 Mm.102487 NM_001033236 ENSMUSG00000049882 Vcpkmt Gm71|Mettl21d|Mettl221d|VCP-KMT valosin containing protein lysine (K) methyltransferase protein-coding common_peak2_420_4340_-0.000798463400860427_12.0834124755524_0.301055015507848 chr4 145227304 145232420 + 0.301055015507848 NA intron (NM_011610, intron 1 of 9) intron (NM_011610, intron 1 of 9) 17008 NM_011610 21938 Mm.235328 NM_011610 ENSMUSG00000028599 Tnfrsf1b CD120b|TNF-R-II|TNF-R2|TNF-R75|TNF-alphaR2|TNFBR|TNFR80|TNFRII|TNFalpha-R2|Tnfr-1|Tnfr2|p75 tumor necrosis factor receptor superfamily, member 1b protein-coding common_peak1_675_7755_-5.86172046723732e-05_12.9210677795045_0.301043995227526 chr8 83736108 83742931 + 0.301043995227526 NA intron (NM_011925, intron 1 of 19) intron (NM_011925, intron 1 of 19) 1792 NM_001163029 26364 Mm.334648 NM_011925 ENSMUSG00000002885 Adgre5 AA409984|Cd97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding common_peak1_293_2793_-0.000493241159141178_11.4478696848299_0.301029995667611 chr5 73254418 73256683 + 0.301029995667611 NA intron (NM_028194, intron 1 of 62) CpG 1068 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak2_224_2012_-0.000847232478387028_10.9747078406821_0.301029995666031 chrX 42501513 42507988 + 0.301029995666031 NA promoter-TSS (NM_001313691) promoter-TSS (NM_001313691) -572 NM_001313691 20400 Mm.441197 NM_011364 ENSMUSG00000005696 Sh2d1a Gm686|SAP SH2 domain containing 1A protein-coding common_peak2_169_1426_-0.000515460436915305_10.4785118892573_0.30102999566534 chr18 77773197 77775127 + 0.30102999566534 NA intron (NM_007505, intron 1 of 11) CpG 394 NM_007505 11946 Mm.276137 NM_007505 ENSMUSG00000025428 Atp5a1 AI035633|AL022851|AL023067|Atpm|D18Ertd206e|Mom2 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 protein-coding common_peak2_278_2619_-0.00039985938393805_11.3551511667328_0.301029995665241 chr2 156861972 156864893 + 0.301029995665241 NA promoter-TSS (NR_027914) promoter-TSS (NR_027914) 310 NM_026124 67388 Mm.29264 NM_026124 ENSMUSG00000027637 1110008F13Rik AI316789 RIKEN cDNA 1110008F13 gene protein-coding common_peak2_144_1174_-0.00167614006147332_10.1976069714216_0.301029995665142 chr7 111028240 111029704 + 0.301029995665142 NA promoter-TSS (NM_009431) promoter-TSS (NM_009431) 21 NM_009431 22083 Mm.255858 NM_009431 ENSMUSG00000005609 Ctr9 AA409336|Sh2bp1|Tsbp|Tsp|mKIAA0155 CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding common_peak2_464_4901_-0.00023246110092856_12.2590385383164_0.301029995664846 chr4 126107461 126114104 + 0.301029995664846 NA intron (NM_028800, intron 1 of 10) intron (NM_028800, intron 1 of 10) 6825 NM_001145827 74178 Mm.440269 NM_028800 ENSMUSG00000042608 Stk40 2310004N11Rik|AI428792 serine/threonine kinase 40 protein-coding common_peak2_139_1124_-0.00103894920815328_10.1351898115003_0.301029995664747 chr4 155668524 155670055 + 0.301029995664747 NA promoter-TSS (NM_145124) promoter-TSS (NM_145124) -35 NM_001256107 76580 Mm.235738 NM_145124 ENSMUSG00000029060 Mib2 2210008I11Rik|Zzank1|skd mindbomb E3 ubiquitin protein ligase 2 protein-coding common_peak2_51_334_-0.00598372951784754_8.38502542058621_0.301029995664229 chr8 124520544 124521553 + 0.301029995664229 NA intron (NM_029746, intron 1 of 17) intron (NM_029746, intron 1 of 17) 281 NM_029746 76332 Mm.240108 NM_029746 ENSMUSG00000031979 Cog2 1190002B08Rik|2700012E02Rik|C86089|Ldlc component of oligomeric golgi complex 2 protein-coding common_peak2_46_295_-0.00632227820293174_8.20629222652748_0.301029995664229-2 chrX 21061351 21062623 + 0.301029995664229 NA promoter-TSS (NM_001111076) promoter-TSS (NM_001111076) 51 NM_001013387 319535 Mm.170163 NM_001013387 ENSMUSG00000054737 Zfp182 6330583I20Rik|Znf182 zinc finger protein 182 protein-coding common_peak1_46_295_-0.00632227820293174_8.20629222652748_0.301029995664229 chr5 124084092 124084992 + 0.301029995664229 NA intron (NM_019875, intron 2 of 11) intron (NM_019875, intron 2 of 11) 11256 NM_019875 56325 Mm.254839 NM_019875 ENSMUSG00000029408 Abcb9 TAPL|mKIAA1520 ATP-binding cassette, sub-family B (MDR/TAP), member 9 protein-coding common_peak2_46_295_-0.00632227820293174_8.20629222652748_0.301029995664229 chr15 76464754 76466354 + 0.301029995664229 NA intron (NM_013481, intron 3 of 15) intron (NM_013481, intron 3 of 15) 8116 NM_198885 20289 Mm.322821 NM_198885 ENSMUSG00000034161 Scx BB114693|Bhlha41|Scl scleraxis protein-coding common_peak2_56_373_-0.00239574033746415_8.5456965897189_0.301029995664204 chr5 64780391 64782045 + 0.301029995664204 NA Intergenic Intergenic -22305 NM_008453 16599 Mm.392759 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|Tef-2 Kruppel-like factor 3 (basic) protein-coding common_peak2_65_447_-0.00342266321036711_8.80564359045242_0.301029995664204 chr14 60725050 60728036 + 0.301029995664204 NA intron (NM_001033272, intron 4 of 12) intron (NM_001033272, intron 4 of 12) -6361 NM_001310594 219140 Mm.149776 NM_001033272 ENSMUSG00000021990 Spata13 C79050|ESTM11|X83327|mFLJ00298 spermatogenesis associated 13 protein-coding common_peak1_93_690_-0.00279850177588337_9.43114264950032_0.301029995664155 chr4 32257183 32258244 + 0.301029995664155 NA Intergenic Intergenic -159722 NM_001109661 12014 Mm.491223 NM_007521 ENSMUSG00000040270 Bach2 E030004N02Rik BTB and CNC homology, basic leucine zipper transcription factor 2 protein-coding common_peak1_100_753_-0.00157251966320615_9.55763445343706_0.301029995664155 chr1 173490136 173491910 + 0.301029995664155 NA Intergenic RMER17C2|LTR|ERVK 44934 NM_001024721 545384 Mm.371698 NM_001024721 ENSMUSG00000070501 Ifi214 Pyhin-B|p214 interferon activated gene 214 protein-coding common_peak2_79_566_-0.00284607493873956_9.14578188747286_0.301029995664155 chr10 78411940 78413102 + 0.301029995664155 NA intron (NM_010925, intron 1 of 12) intron (NM_010925, intron 1 of 12) 522 NM_010925 18114 Mm.38344 NM_010925 ENSMUSG00000061032 Rrp1 AL033305|AL033306|AU018604|NNP-1|Nnp1 ribosomal RNA processing 1 homolog (S. cerevisiae) protein-coding unique_peak2_43_272_-0.00634708703954523_8.08958359740008_0.30102999566413 chr9 22327237 22328510 + 0.30102999566413 NA intron (NR_030448, intron 1 of 4) intron (NR_030448, intron 1 of 4) 2817 NR_033622 625603 Mm.37987 NR_033622 Gm6607 EG625603 40S ribosomal protein S20 pseudogene pseudo common_peak1_50_326_-0.00547604837062643_8.35040880131277_0.30102999566413 chr15 60179969 60180804 + 0.30102999566413 NA Intergenic MER92-int|LTR|ERV1 -163768 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak1_43_272_-0.00634708703954523_8.08958359740008_0.30102999566413-2 chr2 156007933 156008677 + 0.30102999566413 NA promoter-TSS (NM_001145352) promoter-TSS (NM_001145352) 180 NM_025516 66366 Mm.141276 NM_025516 ENSMUSG00000005881 Ergic3 2310015B14Rik|AV318804|CGI-54|D2Ucla1|NY-BR-84|Sdbcag84 ERGIC and golgi 3 protein-coding common_peak1_43_272_-0.00634708703954523_8.08958359740008_0.30102999566413 chr15 78879196 78879998 + 0.30102999566413 NA intron (NM_145929, intron 1 of 16) intron (NM_145929, intron 1 of 16) 2407 NM_145929 106039 Mm.251331 NM_145929 ENSMUSG00000033128 Gga1 4930406E12Rik|AU016030|AW209092 golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding common_peak1_38_234_-0.00357349695713882_7.87473019808643_0.301029995664081 chr11 59965006 59965567 + 0.301029995664081 NA promoter-TSS (NM_009026) promoter-TSS (NM_009026) -342 NM_009026 19416 Mm.3903 NM_009026 ENSMUSG00000049892 Rasd1 Dexras1 RAS, dexamethasone-induced 1 protein-coding common_peak1_31_184_-0.00851588620478783_7.52712351741392_0.301029995664068-2 chr9 90267936 90268599 + 0.301029995664068 NA intron (NM_194334, intron 1 of 12) intron (NM_194334, intron 1 of 12) 2502 NM_194334 67016 Mm.335347 NM_194334 ENSMUSG00000037410 Tbc1d2b 1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055 TBC1 domain family, member 2B protein-coding common_peak1_31_184_-0.00851588620478783_7.52712351741392_0.301029995664068 chr8 13213643 13214172 + 0.301029995664068 NA Intergenic Intergenic -13283 NM_025768 66790 Mm.34901 NM_025768 ENSMUSG00000038515 Grtp1 5430401C05Rik|C81211|Tbc1d6 GH regulated TBC protein 1 protein-coding common_peak2_58_390_-0.00549839226552784_8.60827560117459_0.301029995664056 chr13 95912271 95913854 + 0.301029995664056 NA Intergenic Intergenic -21140 NM_027711 544963 Mm.38878 NM_027711 ENSMUSG00000021676 Iqgap2 4933417J23Rik|A630053O10|AI788777 IQ motif containing GTPase activating protein 2 protein-coding common_peak2_45_287_-0.00485188616244692_8.16749905836109_0.301029995664056 chr14 24490690 24491716 + 0.301029995664056 NA intron (NM_011297, intron 1 of 5) CpG 522 NM_011297 20088 Mm.16775 NM_011297 ENSMUSG00000025290 Rps24 - ribosomal protein S24 protein-coding common_peak2_49_318_-0.00478511044212837_8.3150200585438_0.301029995664056 chr11 4218121 4218996 + 0.301029995664056 NA intron (NM_028022, intron 1 of 8) CpG 307 NM_028022 71962 Mm.7852 NM_028022 ENSMUSG00000020424 Gatsl3 2410008K03Rik GATS protein-like 3 protein-coding common_peak2_188_1624_-0.000480326698113487_10.6659838394541_0.301029995664056 chr5 64471567 64476517 + 0.301029995664056 NA Intergenic Intergenic -2966 NR_045411 77382 Mm.366742 NR_045411 ENSMUSG00000105352 C030018K13Rik - RIKEN cDNA C030018K13 gene ncRNA common_peak1_35_212_-0.00341194716681503_7.73300364664243_0.301029995664031 chr9 22116550 22117200 + 0.301029995664031 NA intron (NR_030448, intron 3 of 4) CpG -2706 NM_170777 66126 Mm.29801 NM_170777 ENSMUSG00000013822 Elof1 1110011K10Rik ELF1 homolog, elongation factor 1 protein-coding unique_peak2_22_123_-0.0157355062933648_6.94632855724019_0.301029995664031 chr14 30877198 30878435 + 0.301029995664031 NA TTS (NM_028839) TTS (NM_028839) -1441 NM_181390 66175 Mm.220895 NM_181390 ENSMUSG00000042485 Mustn1 1110028G01Rik|Mustang musculoskeletal, embryonic nuclear protein 1 protein-coding common_peak1_27_156_-0.00805599887370168_7.29059274945478_0.301029995664019 chr4 141425760 141426403 + 0.301029995664019 NA TTS (NM_013868) TTS (NM_013868) 5302 NM_013868 29818 Mm.46181 NM_013868 ENSMUSG00000006221 Hspb7 27kDa|Hsp25-2|cvHsp heat shock protein family, member 7 (cardiovascular) protein-coding common_peak1_23_129_-0.00859234493635963_7.01807164056027_0.301029995664019 chr1 55363421 55363890 + 0.301029995664019 NA promoter-TSS (NM_029267) promoter-TSS (NM_029267) -186 NM_029267 75388 Mm.483408 NM_029267 ENSMUSG00000025977 Boll 4930554P13Rik|4930597B14Rik bol, boule-like (Drosophila) protein-coding unique_peak2_23_129_-0.00859234493635963_7.01807164056027_0.301029995664019 chr11 117951847 117952902 + 0.301029995664019 NA Intergenic Intergenic 16992 NM_007707 12702 Mm.3468 NM_007707 ENSMUSG00000053113 Socs3 Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3 suppressor of cytokine signaling 3 protein-coding common_peak2_27_156_-0.00805599887370168_7.29059274945478_0.301029995664019 chr7 142358438 142359856 + 0.301029995664019 NA intron (NM_177265, intron 2 of 3) intron (NM_177265, intron 2 of 3) 13112 NM_177265 320802 Mm.154486 NM_177265 ENSMUSG00000045777 Ifitm10 6330512M04Rik|AI848576|DSPA3 interferon induced transmembrane protein 10 protein-coding common_peak1_23_129_-0.00859234493635963_7.01807164056027_0.301029995664019-2 chr11 46263683 46264307 + 0.301029995664019 NA intron (NM_133769, intron 13 of 30) B3A|SINE|B2 28438 NM_177075 320116 Mm.39600 NM_177075 ENSMUSG00000048721 Fndc9 C030019I05Rik fibronectin type III domain containing 9 protein-coding common_peak2_40_249_-0.00434101959666133_7.96361377486376_0.301029995664007 chr5 149030872 149031966 + 0.301029995664007 NA Intergenic CpG 20197 NM_001313894 15289 Mm.207047 NM_010439 ENSMUSG00000066551 Hmgb1 HMG-1|Hmg1|SBP-1|p30 high mobility group box 1 protein-coding common_peak1_28_163_-0.00888869010551563_7.35310765956533_0.301029995664007 chr11 106544405 106545001 + 0.301029995664007 NA intron (NM_198292, intron 4 of 11) intron (NM_198292, intron 4 of 11) 43712 NR_030703 100216537 NR_030703 ENSMUSG00000065126 Snord104 - small nucleolar RNA, C/D box 104 snoRNA common_peak1_40_249_-0.00434101959666133_7.96361377486376_0.301029995664007 chr7 28825671 28826359 + 0.301029995664007 NA exon (NM_016772, exon 2 of 10) exon (NM_016772, exon 2 of 10) 677 NM_016772 51798 Mm.291776 NM_016772 ENSMUSG00000053898 Ech1 AA617331 enoyl coenzyme A hydratase 1, peroxisomal protein-coding unique_peak2_28_163_-0.00888869010551563_7.35310765956533_0.301029995664007 chr3 37747557 37748814 + 0.301029995664007 NA Intergenic Intergenic -23825 NM_198657 381438 Mm.490549 NM_198657 ENSMUSG00000058174 Gm5148 EG381438 predicted gene 5148 protein-coding common_peak1_36_220_-0.00811890818002148_7.78384310530142_0.301029995664007-2 chr1 191183445 191184036 + 0.301029995664007 NA promoter-TSS (NM_007498) promoter-TSS (NM_007498) -407 NM_007498 11910 Mm.2706 NM_007498 ENSMUSG00000026628 Atf3 LRG-21 activating transcription factor 3 protein-coding common_peak1_68_472_-0.00310105309259967_8.88414584679309_0.301029995664007 chr13 93765353 93766571 + 0.301029995664007 NA Intergenic Intergenic -5717 NM_009712 11881 Mm.300178 NM_009712 ENSMUSG00000042082 Arsb 1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1 arylsulfatase B protein-coding common_peak1_32_191_-0.00764255306027639_7.58114122419102_0.301029995664007 chr13 54503727 54504233 + 0.301029995664007 NA exon (NM_176987, exon 1 of 10) exon (NM_176987, exon 1 of 10) 175 NM_176987 319719 Mm.376151 NM_176987 ENSMUSG00000043183 Simc1 4732471D19Rik SUMO-interacting motifs containing 1 protein-coding common_peak1_36_220_-0.00811890818002148_7.78384310530142_0.301029995664007 chr1 180404547 180405239 + 0.301029995664007 NA intron (NM_001081175, intron 2 of 7) intron (NM_001081175, intron 2 of 7) -74344 NR_003623 277333 Mm.389223 NM_199472 Gm5069 EG277333 glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo common_peak1_36_220_-0.00811890818002148_7.78384310530142_0.301029995664007-3 chr10 128536434 128537125 + 0.301029995664007 NA Intergenic B2_Mm2|SINE|B2 -10920 NM_011843 23943 Mm.66056 NM_011843 ENSMUSG00000025366 Esyt1 Fam62a|Mbc2|vp115 extended synaptotagmin-like protein 1 protein-coding unique_peak2_36_220_-0.00811890818002148_7.78384310530142_0.301029995664007 chr3 32408592 32409900 + 0.301029995664007 NA Intergenic Intergenic -26905 NM_008839 18706 Mm.260521 NM_008839 ENSMUSG00000027665 Pik3ca 6330412C24Rik|caPI3K|p110|p110alpha phosphatidylinositol 3-kinase, catalytic, alpha polypeptide protein-coding unique_peak2_40_249_-0.00434101959666133_7.96361377486376_0.301029995664007 chr11 100422426 100423721 + 0.301029995664007 NA intron (NM_026561, intron 8 of 8) intron (NM_026561, intron 8 of 8) 7379 NM_001163481 14230 Mm.3894 NM_010221 ENSMUSG00000001555 Fkbp10 AI325255|FKBP-10|FKBP-65|FKBP65|Fkbp-rs1|Fkbp1-rs|Fkbp6|Fkbprp FK506 binding protein 10 protein-coding common_peak1_28_163_-0.00888869010551563_7.35310765956533_0.301029995664007-2 chr2 75938280 75938903 + 0.301029995664007 NA promoter-TSS (NM_028235) promoter-TSS (NM_028235) -129 NM_028235 72421 Mm.275109 NM_028235 ENSMUSG00000075273 Ttc30b 2510042P03Rik|Tcc30b tetratricopeptide repeat domain 30B protein-coding unique_peak2_36_220_-0.00811890818002148_7.78384310530142_0.301029995664007-2 chr5 62715167 62716420 + 0.301029995664007 NA intron (NM_178407, intron 6 of 32) intron (NM_178407, intron 6 of 32) 50384 NM_178407 212285 Mm.244403 NM_178407 ENSMUSG00000037999 Arap2 Centd1|Gm148|mKIAA0580 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding common_peak2_36_220_-0.00811890818002148_7.78384310530142_0.301029995664007 chr1 191193254 191194739 + 0.301029995664007 NA Intergenic Intergenic -10663 NM_007498 11910 Mm.2706 NM_007498 ENSMUSG00000026628 Atf3 LRG-21 activating transcription factor 3 protein-coding common_peak1_15_79_-0.0256748317621946_6.30909067900627_0.301029995664001-5 chr5 143526085 143526526 + 0.301029995664001 NA intron (NM_009007, intron 1 of 5) intron (NM_009007, intron 1 of 5) 1688 NM_009007 19353 Mm.292510 NM_009007 ENSMUSG00000001847 Rac1 AL023026|D5Ertd559e RAS-related C3 botulinum substrate 1 protein-coding common_peak1_15_79_-0.0256748317621946_6.30909067900627_0.301029995664001-2 chr11 68463754 68464146 + 0.301029995664001 NA intron (NM_177320, intron 1 of 18) AT_rich|Low_complexity|Low_complexity 31825 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak1_15_79_-0.0256748317621946_6.30909067900627_0.301029995664001-4 chr2 181409439 181409874 + 0.301029995664001 NA TTS (NM_028125) TTS (NM_028125) 14732 NM_027656 72147 Mm.486504 NM_027656 ENSMUSG00000027583 Zbtb46 2610019F01Rik|4933406L05Rik|BZEL|Btbd4 zinc finger and BTB domain containing 46 protein-coding common_peak1_15_79_-0.0256748317621946_6.30909067900627_0.301029995664001 chr10 75298743 75299162 + 0.301029995664001 NA intron (NM_153406, intron 13 of 15) intron (NM_153406, intron 13 of 15) -17925 NM_009630 11540 Mm.333734 NM_009630 ENSMUSG00000020178 Adora2a A2AAR|A2aR|AA2AR adenosine A2a receptor protein-coding common_peak1_15_79_-0.0256748317621946_6.30909067900627_0.301029995664001-3 chr19 7569993 7570406 + 0.301029995664001 NA intron (NM_139269, intron 2 of 4) B4|SINE|B4 12740 NM_139269 225845 Mm.274810 NM_139269 ENSMUSG00000060675 Pla2g16 C78643|HRSL3|Hrasls3|Hrev107|MLP-3 phospholipase A2, group XVI protein-coding unique_peak2_20_110_-0.0169412225516083_6.7859452550743_0.301029995663994 chr8 123805541 123806539 + 0.301029995663994 NA promoter-TSS (NM_009003) promoter-TSS (NM_009003) 44 NM_009003 19341 Mm.9221 NM_009003 ENSMUSG00000019478 Rab4a AI848268|Rab4 RAB4A, member RAS oncogene family protein-coding common_peak2_25_143_-0.0145037568013802_7.16267312304162_0.301029995663994 chr11 70982331 70983120 + 0.301029995663994 NA exon (NM_007573, exon 1 of 6) exon (NM_007573, exon 1 of 6) 301 NM_007573 12261 Mm.30049 NM_007573 ENSMUSG00000018446 C1qbp AA407365|AA986492|D11Wsu182e|HABP1|P32|gC1qBP complement component 1, q subcomponent binding protein protein-coding common_peak2_29_170_-0.00919608228819513_7.4132544737418_0.301029995663994 chr4 130018784 130020288 + 0.301029995663994 NA intron (NM_173071, intron 27 of 29) intron (NM_173071, intron 27 of 29) 27482 NM_001290715 230775 Mm.262241 NM_173071 ENSMUSG00000028782 Adgrb2 Bai2 adhesion G protein-coupled receptor B2 protein-coding common_peak1_20_110_-0.0169412225516083_6.7859452550743_0.301029995663994-2 chr15 75688540 75689062 + 0.301029995663994 NA Intergenic ORR1D2|LTR|ERVL-MaLR -10011 NM_028404 72960 Mm.182401 NM_028404 ENSMUSG00000000934 Top1mt 2900052H09Rik DNA topoisomerase 1, mitochondrial protein-coding common_peak1_25_143_-0.0145037568013802_7.16267312304162_0.301029995663994-3 chr2 94178478 94178987 + 0.301029995663994 NA Intergenic Intergenic -20823 NM_019657 56348 Mm.22505 NM_019657 ENSMUSG00000027195 Hsd17b12 2610510O05Rik|AI172963|KIK-I|Kik1 hydroxysteroid (17-beta) dehydrogenase 12 protein-coding unique_peak2_25_143_-0.0145037568013802_7.16267312304162_0.301029995663994 chr16 43620044 43620971 + 0.301029995663994 NA Intergenic Intergenic -20148 NR_030576 100124467 NR_030576 ENSMUSG00000076372 Mir568 Mirn568|mmu-mir-568 microRNA 568 ncRNA common_peak1_25_143_-0.0145037568013802_7.16267312304162_0.301029995663994-4 chr7 128028947 128029512 + 0.301029995663994 NA Intergenic Intergenic 24851 NM_001079932 434246 Mm.389924 NM_001079932 ENSMUSG00000042828 Trim72 BC067209|MG53 tripartite motif-containing 72 protein-coding common_peak1_20_110_-0.0169412225516083_6.7859452550743_0.301029995663994-3 chr19 8998638 8999289 + 0.301029995663994 NA intron (NM_009643, intron 1 of 4) intron (NM_009643, intron 1 of 4) 9679 NM_001286518 66395 Mm.203866 NM_009643 ENSMUSG00000069833 Ahnak DY6 AHNAK nucleoprotein (desmoyokin) protein-coding common_peak1_29_170_-0.00919608228819513_7.4132544737418_0.301029995663994 chr5 73151794 73152313 + 0.301029995663994 NA intron (NM_028194, intron 3 of 62) intron (NM_028194, intron 3 of 62) 104565 NM_028194 72313 Mm.260594 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826 FRY like transcription coactivator protein-coding common_peak1_25_143_-0.0145037568013802_7.16267312304162_0.301029995663994 chr14 57798781 57799336 + 0.301029995663994 NA TTS (NR_037238) TTS (NR_037238) 634 NR_037238 100526476 NR_037238 ENSMUSG00000092784 Mir3077 mir-3077|mmu-mir-3077 microRNA 3077 ncRNA unique_peak2_29_170_-0.00919608228819513_7.4132544737418_0.301029995663994 chr14 57398041 57399207 + 0.301029995663994 NA promoter-TSS (NM_030004) promoter-TSS (NM_030004) -141 NM_030004 68631 Mm.25539 NM_030004 ENSMUSG00000021947 Cryl1 1110025H08Rik|A230106J09Rik|C85932|gul3dh crystallin, lambda 1 protein-coding common_peak1_20_110_-0.0169412225516083_6.7859452550743_0.301029995663994-4 chr2 103073722 103074123 + 0.301029995663994 NA promoter-TSS (NM_175094) promoter-TSS (NM_175094) 247 NM_019735 56369 Mm.24772 NM_019735 ENSMUSG00000010911 Apip APIP2|CGI-29|Mmrp19 APAF1 interacting protein protein-coding common_peak1_25_143_-0.0145037568013802_7.16267312304162_0.301029995663994-2 chr19 37208356 37208837 + 0.301029995663994 NA intron (NM_001164336, intron 1 of 4) intron (NM_001164336, intron 1 of 4) 1051 NM_001164336 69104 Mm.175989 NM_027314 ENSMUSG00000023307 March5 1810015H18Rik|2310008I22Rik|2700055A20Rik|5730499H23Rik|E130202O05Rik|MARCH-V|MITOL|Marchv|Rnf153 membrane-associated ring finger (C3HC4) 5 protein-coding common_peak1_20_110_-0.0169412225516083_6.7859452550743_0.301029995663994 chr11 98547443 98547996 + 0.301029995663994 NA Intergenic L1MC3|LINE|L1 -1688 NM_011771 22780 Mm.133367 NM_011771 ENSMUSG00000018168 Ikzf3 5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3 IKAROS family zinc finger 3 protein-coding unique_peak2_21_116_-0.0105669768894536_6.86508123113868_0.301029995663994 chr4 63495198 63496153 + 0.301029995663994 NA 5' UTR (NM_028640, exon 1 of 12) 5' UTR (NM_028640, exon 1 of 12) 316 NM_001008793 73750 Mm.300397 NM_028640 ENSMUSG00000039137 Whrn 1110035G07Rik|AW122018|AW742671|C430046P22Rik|Dfnb31|Ush2d|wi whirlin protein-coding unique_peak2_29_170_-0.00919608228819513_7.4132544737418_0.301029995663994-2 chr19 17217823 17219314 + 0.301029995663994 NA intron (NM_181348, intron 19 of 19) intron (NM_181348, intron 19 of 19) 120937 NM_001136484 14537 Mm.244825 NM_010265 ENSMUSG00000038843 Gcnt1 5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT glucosaminyl (N-acetyl) transferase 1, core 2 protein-coding common_peak1_17_91_-0.0188765941843458_6.51412365896484_0.301029995663982-3 chr3 51636074 51636543 + 0.301029995663982 NA Intergenic RSINE1|SINE|B4 -24871 NM_174995 211666 Mm.24679 NM_174995 ENSMUSG00000074604 Mgst2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding common_peak1_17_91_-0.0188765941843458_6.51412365896484_0.301029995663982-2 chr18 75445640 75446033 + 0.301029995663982 NA intron (NM_201354, intron 10 of 11) intron (NM_201354, intron 10 of 11) -68809 NR_045879 100038353 Mm.440724 NR_045879 ENSMUSG00000097712 Gm10532 ENSMUSG00000073534 predicted gene 10532 ncRNA unique_peak2_17_91_-0.0188765941843458_6.51412365896484_0.301029995663982 chr6 145865484 145866401 + 0.301029995663982 NA promoter-TSS (NM_024469) promoter-TSS (NM_024469) -522 NM_024469 79362 Mm.154529 NM_024469 ENSMUSG00000030256 Bhlhe41 6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1 basic helix-loop-helix family, member e41 protein-coding common_peak1_17_91_-0.0188765941843458_6.51412365896484_0.301029995663982-4 chr4 6844278 6844854 + 0.301029995663982 NA intron (NM_145711, intron 1 of 8) intron (NM_145711, intron 1 of 8) 146157 NM_145711 252838 Mm.435828 NM_145711 ENSMUSG00000041272 Tox 1700007F02Rik thymocyte selection-associated high mobility group box protein-coding common_peak1_17_91_-0.0188765941843458_6.51412365896484_0.301029995663982 chr1 78657294 78657716 + 0.301029995663982 NA promoter-TSS (NM_001001981) promoter-TSS (NM_001001981) -320 NM_001033606 74205 Mm.276016 NM_028817 ENSMUSG00000032883 Acsl3 2610510B12Rik|Acs3|C85929|Facl3|Pro2194 acyl-CoA synthetase long-chain family member 3 protein-coding common_peak1_17_91_-0.0188765941843458_6.51412365896484_0.301029995663982-7 chr7 135735978 135736427 + 0.301029995663982 NA Intergenic Intergenic -19823 NM_001081117 17345 Mm.4078 NM_001081117 ENSMUSG00000031004 Mki67 D630048A14Rik|Ki-67|Ki67 antigen identified by monoclonal antibody Ki 67 protein-coding unique_peak2_17_91_-0.0188765941843458_6.51412365896484_0.301029995663982-2 chr9 63700954 63701821 + 0.301029995663982 NA intron (NM_016769, intron 1 of 8) intron (NM_016769, intron 1 of 8) 56607 NM_016769 17127 Mm.7320 NM_016769 ENSMUSG00000032402 Smad3 AU022421|Madh3 SMAD family member 3 protein-coding common_peak1_17_91_-0.0188765941843458_6.51412365896484_0.301029995663982-6 chr5 105142393 105142885 + 0.301029995663982 NA Intergenic Intergenic -3053 NM_001256005 17472 Mm.440525 NM_008620 ENSMUSG00000079363 Gbp4 AW228052|Mag-2|Mpa-2|Mpa2 guanylate binding protein 4 protein-coding common_peak1_17_91_-0.0188765941843458_6.51412365896484_0.301029995663982-5 chr4 45402654 45403066 + 0.301029995663982 NA intron (NM_001009949, intron 2 of 2) intron (NM_001009949, intron 2 of 2) 5906 NM_001009949 230125 Mm.260210 NM_001009949 ENSMUSG00000045973 Slc25a51 9130208E07Rik|D130005A03Rik|Gm138|Mcart1 solute carrier family 25, member 51 protein-coding unique_peak2_18_97_-0.014345640718318_6.60753702375605_0.30102999566397-3 chr14 54449020 54449727 + 0.30102999566397 NA Intergenic Intergenic -14774 NM_022993 65107 Mm.472719 NM_022993 ENSMUSG00000022175 Lrp10 Lrp9 low-density lipoprotein receptor-related protein 10 protein-coding common_peak1_18_97_-0.014345640718318_6.60753702375605_0.30102999566397-4 chr2 174611418 174611904 + 0.30102999566397 NA Intergenic Intergenic -31873 NM_001099328 100043757 Mm.48711 NM_001099328 ENSMUSG00000050600 Zfp831 ENSMUSG00000050600|OTTMUSG00000017459 zinc finger protein 831 protein-coding common_peak1_18_97_-0.014345640718318_6.60753702375605_0.30102999566397-3 chr19 4064506 4064955 + 0.30102999566397 NA Intergenic MMVL30-int|LTR|ERV1 -5436 NM_144869 225884 Mm.440201 NM_144869 ENSMUSG00000058216 Gstp3 - glutathione S-transferase pi 3 protein-coding common_peak1_18_97_-0.014345640718318_6.60753702375605_0.30102999566397-6 chr6 129284930 129285404 + 0.30102999566397 NA Intergenic Intergenic -9798 NM_001033122 12515 Mm.74745 NM_001033122 ENSMUSG00000030156 Cd69 5830438K24Rik|AI452015|AIM|VEA CD69 antigen protein-coding unique_peak2_18_97_-0.014345640718318_6.60753702375605_0.30102999566397-2 chr11 77624587 77625302 + 0.30102999566397 NA Intergenic Intergenic -17129 NM_144825 216965 Mm.340436 NM_144825 ENSMUSG00000017291 Taok1 2810468K05Rik|AU020252|D130018F14Rik|Map3k16|Markk|Psk2|mKIAA1361 TAO kinase 1 protein-coding common_peak1_18_97_-0.014345640718318_6.60753702375605_0.30102999566397-2 chr15 81042223 81042660 + 0.30102999566397 NA intron (NM_153049, intron 2 of 12) intron (NM_153049, intron 2 of 12) 62606 NM_153049 223701 Mm.439814 NM_153049 ENSMUSG00000042292 Mkl1 AMKL|Bsac|Mal|Mrtf-A MKL (megakaryoblastic leukemia)/myocardin-like 1 protein-coding unique_peak2_13_67_-0.0275104024187689_6.07370764004095_0.30102999566397 chr1 175692962 175693519 + 0.30102999566397 NA promoter-TSS (NM_010098) promoter-TSS (NM_010098) -608 NM_010098 13603 Mm.32744 NM_010098 ENSMUSG00000026525 Opn3 ERO|Ecpn opsin 3 protein-coding common_peak1_13_67_-0.0275104024187689_6.07370764004095_0.30102999566397 chr10 66852983 66853333 + 0.30102999566397 NA Intergenic Intergenic -151917 NR_110511 102634101 Mm.445258 NR_110511 Gm31763 - predicted gene, 31763 ncRNA common_peak1_18_97_-0.014345640718318_6.60753702375605_0.30102999566397 chr1 92063810 92064384 + 0.30102999566397 NA intron (NM_207225, intron 2 of 26) intron (NM_207225, intron 2 of 26) 116244 NM_207225 208727 Mm.318567 NM_207225 ENSMUSG00000026313 Hdac4 4932408F19Rik|HD4 histone deacetylase 4 protein-coding common_peak1_18_97_-0.014345640718318_6.60753702375605_0.30102999566397-5 chr5 138161122 138161557 + 0.30102999566397 NA intron (NM_012002, intron 1 of 9) intron (NM_012002, intron 1 of 9) 237 NM_012002 26893 Mm.3981 NM_012002 ENSMUSG00000019494 Cops6 Sgn3|VIP/MOV34 COP9 signalosome subunit 6 protein-coding common_peak1_13_67_-0.0275104024187689_6.07370764004095_0.30102999566397-2 chr12 102745203 102745464 + 0.30102999566397 NA TTS (NM_177140) TTS (NM_177140) 1573 NM_177140 320351 Mm.86546 NM_177140 ENSMUSG00000046675 Tmem251 D230037D09Rik transmembrane protein 251 protein-coding unique_peak2_18_97_-0.014345640718318_6.60753702375605_0.30102999566397 chr1 61423521 61424178 + 0.30102999566397 NA Intergenic Intergenic 45417 NR_040483 77341 Mm.402964 NR_040483 ENSMUSG00000085447 9530026F06Rik - RIKEN cDNA 9530026F06 gene ncRNA common_peak1_37_227_-0.0059134995814949_7.82993326437399_0.301029995663957 chr9 95958385 95959150 + 0.301029995663957 NA intron (NM_001311130, intron 1 of 41) MT2B2|LTR|ERVL 4007 NM_001311130 24127 Mm.291179 NM_011916 ENSMUSG00000032410 Xrn1 Dhm2|exo|mXrn1 5'-3' exoribonuclease 1 protein-coding unique_peak2_19_103_-0.00930549051031537_6.69578697288593_0.301029995663957 chr4 126849767 126850707 + 0.301029995663957 NA intron (NM_001035525, intron 20 of 23) intron (NM_001035525, intron 20 of 23) 96467 NM_001035526 100317 Mm.206206 NM_133886 ENSMUSG00000028830 AU040320 A730047D20Rik|AAVR|Kiaa0319l expressed sequence AU040320 protein-coding common_peak2_37_227_-0.0059134995814949_7.82993326437399_0.301029995663957 chr8 105347032 105348156 + 0.301029995663957 NA promoter-TSS (NM_001081332) promoter-TSS (NM_001081332) 376 NM_177699 234686 Mm.87724 NM_177699 ENSMUSG00000014778 Fhod1 BC017144|FHOS|FHOS1 formin homology 2 domain containing 1 protein-coding common_peak1_33_198_-0.00647604838312166_7.63338659635209_0.301029995663957-2 chr18 7626286 7627018 + 0.301029995663957 NA intron (NM_001161620, intron 1 of 12) CpG 211 NM_001081287 75739 Mm.133293 NM_001081287 ENSMUSG00000057440 Mpp7 1110068J02Rik|2810038M04Rik|5430426E14Rik|AI415104|Gm955 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) protein-coding common_peak2_33_198_-0.00647604838312166_7.63338659635209_0.301029995663957 chr4 32100484 32102030 + 0.301029995663957 NA Intergenic L1MB3|LINE|L1 137150 NM_172688 26409 Mm.258589 NM_009316 ENSMUSG00000028284 Map3k7 B430101B05|C87327|Tak1 mitogen-activated protein kinase kinase kinase 7 protein-coding common_peak2_80_575_-0.00358291844943359_9.1681335422176_0.301029995663957 chr8 107587553 107588952 + 0.301029995663957 NA intron (NM_010817, intron 1 of 6) CpG 230 NM_010817 17463 Mm.18347 NM_010817 ENSMUSG00000039067 Psmd7 AW107203|Mov-34|Mov34 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 protein-coding common_peak1_33_198_-0.00647604838312166_7.63338659635209_0.301029995663957 chr10 93343800 93344328 + 0.301029995663957 NA intron (NR_038014, intron 1 of 2) intron (NR_038014, intron 1 of 2) 7832 NR_038014 432488 Mm.32833 NR_038014 Gm17745 - predicted gene, 17745 ncRNA common_peak1_19_103_-0.00930549051031537_6.69578697288593_0.301029995663957 chr13 74521933 74522468 + 0.301029995663957 NA Intergenic Intergenic -28250 NM_146231 235956 Mm.296909 NM_146231 ENSMUSG00000069208 Zfp825 - zinc finger protein 825 protein-coding common_peak1_24_136_-0.0120168908241425_7.09202363754846_0.301029995663957-3 chr7 58736955 58737541 + 0.301029995663957 NA intron (NM_009728, intron 1 of 20) intron (NM_009728, intron 1 of 20) 79046 NM_009728 11982 Mm.135129 NM_009728 ENSMUSG00000025324 Atp10a Atp10c|pfatp ATPase, class V, type 10A protein-coding common_peak1_24_136_-0.0120168908241425_7.09202363754846_0.301029995663957-4 chr9 96896349 96896848 + 0.301029995663957 NA Intergenic Intergenic -7124 NM_001289645 235534 Mm.233031 NM_153420 ENSMUSG00000043587 Pxylp1 9430094M07Rik|Acpl2|BB177120|C130099A20Rik 2-phosphoxylose phosphatase 1 protein-coding unique_peak2_37_227_-0.0059134995814949_7.82993326437399_0.301029995663957 chr5 93104531 93106083 + 0.301029995663957 NA intron (NM_001310669, intron 1 of 10) B2_Mm1a|SINE|B2 11891 NM_001310671 52398 Mm.394184 NM_001009818 ENSMUSG00000058013 Sept11 6230410I01Rik|AW548875|D5Ertd606e septin 11 protein-coding common_peak1_14_73_-0.0274092442176022_6.19574874352015_0.301029995663957-6 chr4 59276558 59276944 + 0.301029995663957 NA Intergenic Intergenic 16700 NR_105031 101055769 Mm.421401 NR_105031 Gm12596 OTTMUSG00000007649 predicted gene 12596 ncRNA common_peak2_24_136_-0.0120168908241425_7.09202363754846_0.301029995663957 chr13 40921945 40922638 + 0.301029995663957 NA intron (NM_133219, intron 1 of 2) intron (NM_133219, intron 1 of 2) 4657 NM_133219 14538 Mm.314757 NM_008105 ENSMUSG00000021360 Gcnt2 5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC glucosaminyl (N-acetyl) transferase 2, I-branching enzyme protein-coding common_peak1_14_73_-0.0274092442176022_6.19574874352015_0.301029995663957-2 chr12 85485639 85486037 + 0.301029995663957 NA Intergenic Intergenic 11937 NM_010234 14281 Mm.246513 NM_010234 ENSMUSG00000021250 Fos D12Rfj1|c-fos|cFos FBJ osteosarcoma oncogene protein-coding common_peak1_14_73_-0.0274092442176022_6.19574874352015_0.301029995663957-3 chr13 111685612 111685982 + 0.301029995663957 NA promoter-TSS (NM_172593) promoter-TSS (NM_172593) -381 NM_172593 218613 Mm.31012 NM_172593 ENSMUSG00000032727 Mier3 5730509D14|AU015422|D130064H19Rik MIER family member 3 protein-coding common_peak2_14_73_-0.0274092442176022_6.19574874352015_0.301029995663957 chr3 89437579 89438270 + 0.301029995663957 NA intron (NM_146131, intron 1 of 10) B2_Mm1t|SINE|B2 1220 NM_146131 229534 Mm.65906 NM_146131 ENSMUSG00000042613 Pbxip1 4732463H20Rik pre B cell leukemia transcription factor interacting protein 1 protein-coding unique_peak2_14_73_-0.0274092442176022_6.19574874352015_0.301029995663957 chr17 83830504 83831118 + 0.301029995663957 NA TTS (NM_025325) TTS (NM_025325) 15979 NM_025325 107766 Mm.30100 NM_025325 ENSMUSG00000000673 Haao 0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding common_peak2_24_136_-0.0120168908241425_7.09202363754846_0.301029995663957-2 chr9 3335235 3336097 + 0.301029995663957 NA intron (NM_026303, intron 1 of 11) intron (NM_026303, intron 1 of 11) 435 NM_026303 67667 Mm.116968 NM_026303 ENSMUSG00000025899 Alkbh8 4930562C03Rik|8030431D03Rik|9430088N01Rik|Abh8 alkB homolog 8, tRNA methyltransferase protein-coding common_peak1_33_198_-0.00647604838312166_7.63338659635209_0.301029995663957-3 chr4 134041756 134042519 + 0.301029995663957 NA Intergenic Intergenic -23321 NM_145833 83557 Mm.302567 NM_145833 ENSMUSG00000050966 Lin28a AL024421|ENSMUSG00000070700|Gm10299|Lin-28|Lin28|Tex17|lin-28A lin-28 homolog A (C. elegans) protein-coding common_peak1_48_310_-0.00389453321991873_8.27882350352064_0.301029995663957 chr8 35634450 35635357 + 0.301029995663957 NA intron (NM_001081279, intron 1 of 2) intron (NM_001081279, intron 1 of 2) -45883 NR_040376 100504714 Mm.381744 NR_040376 ENSMUSG00000097357 Gm16793 - predicted gene, 16793 ncRNA common_peak1_14_73_-0.0274092442176022_6.19574874352015_0.301029995663957-4 chr17 28909160 28909508 + 0.301029995663957 NA exon (NM_172450, exon 2 of 12) exon (NM_172450, exon 2 of 12) 4069 NR_045457 74179 Mm.248931 NR_045457 ENSMUSG00000085333 1700030A11Rik - RIKEN cDNA 1700030A11 gene ncRNA common_peak1_24_136_-0.0120168908241425_7.09202363754846_0.301029995663957-2 chr5 23675496 23676020 + 0.301029995663957 NA Intergenic CpG 36909 NR_038090 433855 Mm.205125 NR_015554 ENSMUSG00000105987 AI506816 - expressed sequence AI506816 ncRNA common_peak1_14_73_-0.0274092442176022_6.19574874352015_0.301029995663957-7 chr6 108835801 108836162 + 0.301029995663957 NA intron (NM_138677, intron 1 of 11) intron (NM_138677, intron 1 of 11) 7340 NM_138677 192193 Mm.21596 NM_138677 ENSMUSG00000030104 Edem1 A130059K23Rik|EDEM|mKIAA0212 ER degradation enhancer, mannosidase alpha-like 1 protein-coding common_peak1_19_103_-0.00930549051031537_6.69578697288593_0.301029995663957-3 chr9 61946277 61946754 + 0.301029995663957 NA intron (NM_024245, intron 1 of 22) CpG 284 NM_024245 71819 Mm.259374 NM_024245 ENSMUSG00000032254 Kif23 3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1 kinesin family member 23 protein-coding common_peak1_80_575_-0.00358291844943359_9.1681335422176_0.301029995663957 chr3 104770667 104771866 + 0.301029995663957 NA intron (NM_183224, intron 6 of 6) B3|SINE|B2 6281 NM_183224 329731 Mm.389494 NM_183224 ENSMUSG00000055865 Fam19a3 7530404M11Rik|TAFA3|Tafa-3 family with sequence similarity 19, member A3 protein-coding unique_peak2_14_73_-0.0274092442176022_6.19574874352015_0.301029995663957-2 chr19 4437404 4438084 + 0.301029995663957 NA intron (NM_007485, intron 1 of 4) B1_Mus2|SINE|Alu -1579 NR_045990 319314 Mm.393810 NR_045989 ENSMUSG00000087132 A930001C03Rik - RIKEN cDNA A930001C03 gene ncRNA common_peak1_14_73_-0.0274092442176022_6.19574874352015_0.301029995663957-5 chr2 45107135 45107547 + 0.301029995663957 NA intron (NM_001289521, intron 1 of 8) intron (NM_001289521, intron 1 of 8) 2936 NM_001289521 24136 Mm.440702 NM_015753 ENSMUSG00000026872 Zeb2 9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b zinc finger E-box binding homeobox 2 protein-coding common_peak1_19_103_-0.00930549051031537_6.69578697288593_0.301029995663957-2 chr3 108726980 108727426 + 0.301029995663957 NA Intergenic L1_Mus3|LINE|L1 -4904 NM_029522 76123 Mm.226941 NM_029522 ENSMUSG00000027883 Gpsm2 6230410J09Rik|LGN|Pins G-protein signalling modulator 2 (AGS3-like, C. elegans) protein-coding common_peak1_24_136_-0.0120168908241425_7.09202363754846_0.301029995663957 chr4 150894804 150895370 + 0.301029995663957 NA Intergenic Intergenic 14834 NM_020569 57320 Mm.277349 NM_020569 ENSMUSG00000028964 Park7 DJ-1|Dj1 Parkinson disease (autosomal recessive, early onset) 7 protein-coding common_peak1_14_73_-0.0274092442176022_6.19574874352015_0.301029995663957 chr11 89100953 89101337 + 0.301029995663957 NA Intergenic Intergenic 27304 NM_001033266 217071 Mm.342127 NM_001033266 ENSMUSG00000072553 Gm525 - predicted gene 525 protein-coding common_peak1_16_85_-0.022728493727926_6.41490050783814_0.301029995663939-4 chr4 130903065 130903486 + 0.301029995663939 NA Intergenic Intergenic -10059 NM_010686 16792 Mm.271868 NM_010686 ENSMUSG00000028581 Laptm5 E3 lysosomal-associated protein transmembrane 5 protein-coding unique_peak2_16_85_-0.022728493727926_6.41490050783814_0.301029995663939-2 chr5 125158389 125159052 + 0.301029995663939 NA intron (NM_001253904, intron 1 of 47) intron (NM_001253904, intron 1 of 47) 20494 NM_001253904 20602 Mm.278646 NM_011424 ENSMUSG00000029478 Ncor2 N-CoR|SMRT|SMRTe nuclear receptor co-repressor 2 protein-coding common_peak1_16_85_-0.022728493727926_6.41490050783814_0.301029995663939-2 chr13 55449555 55449961 + 0.301029995663939 NA intron (NM_011938, intron 2 of 15) intron (NM_011938, intron 2 of 15) -3348 NR_105908 102466770 NR_105908 ENSMUSG00000099058 Mir6943 Gm27791|mmu-mir-6943 microRNA 6943 ncRNA common_peak1_16_85_-0.022728493727926_6.41490050783814_0.301029995663939 chr10 111298735 111299207 + 0.301029995663939 NA intron (NM_027914, intron 1 of 1) intron (NM_027914, intron 1 of 1) 292 NM_027914 71769 Mm.45256 NM_027914 ENSMUSG00000035759 Bbs10 1300007O09Rik|AI452285 Bardet-Biedl syndrome 10 (human) protein-coding unique_peak2_16_85_-0.022728493727926_6.41490050783814_0.301029995663939 chr2 166289976 166290733 + 0.301029995663939 NA intron (NR_033467, intron 2 of 2) intron (NR_033467, intron 2 of 2) 16446 NR_033467 670775 Mm.384326 NR_033467 ENSMUSG00000084840 Gm11468 OTTMUSG00000001131 predicted gene 11468 ncRNA common_peak1_16_85_-0.022728493727926_6.41490050783814_0.301029995663939-3 chr2 156875495 156875834 + 0.301029995663939 NA intron (NM_029983, intron 6 of 7) intron (NM_029983, intron 6 of 7) 11414 NM_029983 77799 Mm.29264 NM_029983 ENSMUSG00000027636 Sla2 A930009E21Rik|AI430952|SLAP-2|SLAP2 Src-like-adaptor 2 protein-coding unique_peak2_16_85_-0.022728493727926_6.41490050783814_0.301029995663939-3 chr5 139408077 139408759 + 0.301029995663939 NA intron (NM_177000, intron 1 of 1) intron (NM_177000, intron 1 of 1) 2031 NM_177000 319772 Mm.440271 NM_177000 ENSMUSG00000044092 C130050O18Rik - RIKEN cDNA C130050O18 gene protein-coding common_peak1_16_85_-0.022728493727926_6.41490050783814_0.301029995663939-5 chr5 122949498 122949931 + 0.301029995663939 NA intron (NM_001003953, intron 6 of 22) intron (NM_001003953, intron 6 of 22) 39385 NM_001003953 30841 Mm.86406 NM_013910 ENSMUSG00000029475 Kdm2b Cxxc2|Fbl10|Fbxl10|Jhdm1b|PCCX2 lysine (K)-specific demethylase 2B protein-coding common_peak1_42_264_-0.00412137919661149_8.04778785985226_0.301029995663933 chr5 140701679 140702402 + 0.301029995663933 NA intron (NM_028833, intron 1 of 22) CpG 338 NM_028833 74239 Mm.179704 NM_028833 ENSMUSG00000036555 Iqce 1700028P05Rik|mKIAA1023 IQ motif containing E protein-coding unique_peak2_30_177_-0.0090512262320912_7.47120781785035_0.301029995663933 chr12 100503266 100504565 + 0.301029995663933 NA intron (NM_001033213, intron 1 of 19) MIRb|SINE|MIR 16907 NM_001033213 104718 Mm.295441 NM_001033213 ENSMUSG00000033530 Ttc7b AA408451|Ttc7l1 tetratricopeptide repeat domain 7B protein-coding common_peak1_30_177_-0.0090512262320912_7.47120781785035_0.301029995663933-2 chr14 57718389 57718931 + 0.301029995663933 NA intron (NM_015771, intron 2 of 7) ORR1B1|LTR|ERVL-MaLR 15758 NM_153382 50523 Mm.347899 NM_015771 ENSMUSG00000021959 Lats2 4932411G09Rik|AV277261|AW228608 large tumor suppressor 2 protein-coding common_peak1_30_177_-0.0090512262320912_7.47120781785035_0.301029995663933-3 chr17 29003446 29004207 + 0.301029995663933 NA intron (NM_134115, intron 1 of 13) intron (NM_134115, intron 1 of 13) 4111 NM_134115 106504 Mm.439986 NM_134115 ENSMUSG00000024006 Stk38 5830476G13Rik|9530097A09Rik|AA617404|Ndr1 serine/threonine kinase 38 protein-coding common_peak1_30_177_-0.0090512262320912_7.47120781785035_0.301029995663933 chr12 100991197 100991869 + 0.301029995663933 NA intron (NM_026681, intron 3 of 29) intron (NM_026681, intron 3 of 29) 30235 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA unique_peak2_39_242_-0.00706596478864885_7.92127952121146_0.301029995663883 chr7 104507209 104508562 + 0.301029995663883 NA promoter-TSS (NM_199146) promoter-TSS (NM_199146) -36 NM_001167828 209387 Mm.277377 NM_199146 ENSMUSG00000057596 Trim30d AI451617|TRIM30-3|Trim79 tripartite motif-containing 30D protein-coding common_peak1_39_242_-0.00706596478864885_7.92127952121146_0.301029995663883 chr3 88531305 88532199 + 0.301029995663883 NA promoter-TSS (NM_001029890) promoter-TSS (NM_001029890) -643 NM_001029890 72640 Mm.275154 NM_001029890 ENSMUSG00000074480 Mex3a 2700083E18Rik|Gm411|Rkhd4 mex3 RNA binding family member A protein-coding common_peak1_34_205_-0.00505481265968477_7.68397312085338_0.301029995663883 chr1 91048985 91049845 + 0.301029995663883 NA intron (NM_001111312, intron 1 of 12) intron (NM_001111312, intron 1 of 12) -4029 NM_001310732 16978 Mm.45039 NM_008515 ENSMUSG00000026305 Lrrfip1 AU024550|Fliiap1 leucine rich repeat (in FLII) interacting protein 1 protein-coding common_peak1_39_242_-0.00706596478864885_7.92127952121146_0.301029995663883-2 chr6 97209500 97210295 + 0.301029995663883 NA promoter-TSS (NM_022992) promoter-TSS (NM_022992) -895 NM_022992 65106 Mm.291014 NM_022992 ENSMUSG00000035199 Arl6ip5 5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin ADP-ribosylation factor-like 6 interacting protein 5 protein-coding common_peak1_34_205_-0.00505481265968477_7.68397312085338_0.301029995663883-2 chr13 24375278 24376083 + 0.301029995663883 NA intron (NM_001284519, intron 2 of 17) intron (NM_001284519, intron 2 of 17) -39442 NM_007717 12763 Mm.8396 NM_007717 ENSMUSG00000016756 Cmah - cytidine monophospho-N-acetylneuraminic acid hydroxylase protein-coding common_peak1_26_149_-0.00661112365628558_7.22551312866774_0.301029995663883-2 chr7 38017966 38018578 + 0.301029995663883 NA intron (NM_011274, intron 1 of 10) intron (NM_011274, intron 1 of 10) 1280 NM_011274 19777 Mm.387220 NM_011274 ENSMUSG00000030421 Uri1 C80913|NNX3|Rmp URI1, prefoldin-like chaperone protein-coding common_peak1_26_149_-0.00661112365628558_7.22551312866774_0.301029995663883 chr3 14911948 14912611 + 0.301029995663883 NA Intergenic Intergenic 25853 NM_009801 12349 Mm.1186 NM_009801 ENSMUSG00000027562 Car2 AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5 carbonic anhydrase 2 protein-coding common_peak2_34_205_-0.00505481265968477_7.68397312085338_0.301029995663883-2 chr6 6955281 6956582 + 0.301029995663883 NA promoter-TSS (NM_001077713) promoter-TSS (NM_001077713) -87 NM_001077713 71238 Mm.389086 NM_001077713 ENSMUSG00000042505 Sdhaf3 0610005M07Rik|4933430A16Rik|Acn9 succinate dehydrogenase complex assembly factor 3 protein-coding common_peak2_34_205_-0.00505481265968477_7.68397312085338_0.301029995663883 chr11 105125844 105127144 + 0.301029995663883 NA promoter-TSS (NM_172567) promoter-TSS (NM_172567) 69 NM_172567 52686 Mm.270091 NM_172567 ENSMUSG00000020691 Mettl2 2810438F06Rik|AW493404|C130031G21Rik|D11Ertd768e|METL|PSENIP1 methyltransferase like 2 protein-coding common_peak2_129_1027_-0.00209771767462641_10.0045756903566_0.301029995663859 chr7 16206396 16208460 + 0.301029995663859 NA intron (NM_027883, intron 7 of 16) intron (NM_027883, intron 7 of 16) 14565 NM_001285931 71723 Mm.75259 NM_027883 ENSMUSG00000006019 Dhx34 1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134 DEAH (Asp-Glu-Ala-His) box polypeptide 34 protein-coding common_peak2_52_341_-0.00211074944278522_8.4167971401645_0.301029995663859-2 chr8 13604449 13606809 + 0.301029995663859 NA intron (NM_009025, intron 4 of 23) intron (NM_009025, intron 4 of 23) -43168 NM_001080781 66501 Mm.46136 NM_025601 ENSMUSG00000031452 1700029H14Rik - RIKEN cDNA 1700029H14 gene protein-coding common_peak2_53_349_-0.00239123380637807_8.45001549492914_0.301029995663859 chr15 76870576 76872002 + 0.301029995663859 NA 5' UTR (NM_001007568, exon 1 of 4) 5' UTR (NM_001007568, exon 1 of 4) 146 NM_001007568 71591 Mm.38195 NM_001007568 ENSMUSG00000022526 Zfp251 9130001M19Rik|AV339307 zinc finger protein 251 protein-coding unique_peak2_44_279_-0.00310437938033559_8.1277308272548_0.301029995663859 chr5 105114073 105115993 + 0.301029995663859 NA TTS (NM_001256005) TTS (NM_001256005) -4741 NM_172777 236573 Mm.425261 NM_172777 ENSMUSG00000029298 Gbp9 - guanylate-binding protein 9 protein-coding common_peak2_52_341_-0.00211074944278522_8.4167971401645_0.301029995663859 chr3 122245045 122246551 + 0.301029995663859 NA 5' UTR (NM_008129, exon 1 of 7) 5' UTR (NM_008129, exon 1 of 7) 241 NM_008129 14630 Mm.292676 NM_008129 ENSMUSG00000028124 Gclm AI649393|Gcmc|Glclr glutamate-cysteine ligase, modifier subunit protein-coding common_peak1_52_341_-0.00211074944278522_8.4167971401645_0.301029995663859 chr16 21423148 21423744 + 0.301029995663859 NA intron (NM_001285894, intron 1 of 45) CpG 328 NM_001285894 209018 Mm.235683 NM_145948 ENSMUSG00000033653 Vps8 AI315068|AU040738|mKIAA0804 VPS8 CORVET complex subunit protein-coding common_peak2_175_1488_-0.000493362329081037_10.5398813574176_0.301029995663859 chr10 119238829 119241269 + 0.301029995663859 NA promoter-TSS (NM_027994) promoter-TSS (NM_027994) 6 NM_027994 71902 Mm.203965 NM_027994 ENSMUSG00000020114 Cand1 2310038O07Rik|6330512O03Rik|AI195005|AI846556|D10Ertd516e|Tp120a|mKIAA0829 cullin associated and neddylation disassociated 1 protein-coding common_peak1_70_489_-0.00347839315555376_8.93489874242479_0.301029995663809 chr14 66223155 66224558 + 0.301029995663809 NA intron (NM_172498, intron 1 of 29) intron (NM_172498, intron 1 of 29) -10304 NM_001162366 19229 Mm.21613 NM_172498 ENSMUSG00000059456 Ptk2b CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk PTK2 protein tyrosine kinase 2 beta protein-coding common_peak1_57_381_-0.0021532023368227_8.57635222686734_0.301029995663809 chr10 79704481 79705193 + 0.301029995663809 NA intron (NM_001077184, intron 1 of 6) intron (NM_001077184, intron 1 of 6) 479 NM_009768 12215 Mm.726 NM_009768 ENSMUSG00000023175 Bsg AI115436|AI325119|CD147|EMMPRIN|HT-7 basigin protein-coding common_peak1_98_735_-0.0021074922428479_9.52250820993559_0.30102999566371 chr15 89373357 89374221 + 0.30102999566371 NA promoter-TSS (NM_001111288) promoter-TSS (NM_001111288) 29 NM_001111288 100126824 Mm.287977 NM_001111288 ENSMUSG00000091780 Sco2 - SCO2 cytochrome c oxidase assembly protein protein-coding common_peak1_114_883_-0.00133616841960205_9.78723447518163_0.301029995663661 chr19 4012030 4013075 + 0.301029995663661 NA exon (NM_133666, exon 1 of 10) exon (NM_133666, exon 1 of 10) 203 NM_133666 17995 Mm.29842 NM_133666 ENSMUSG00000037916 Ndufv1 CI-51kD NADH dehydrogenase (ubiquinone) flavoprotein 1 protein-coding common_peak1_72_506_-0.00352291061771304_8.98408048169448_0.301029995663661 chr11 75651424 75652283 + 0.301029995663661 NA promoter-TSS (NM_001080774) promoter-TSS (NM_001080774) -297 NM_001080774 17913 Mm.234502 NM_008659 ENSMUSG00000017774 Myo1c C80397|MMIb|MYO1E|NMI|mm1beta|myr2 myosin IC protein-coding common_peak1_67_464_-0.00432602264851134_8.85892389467114_0.301029995663612 chr8 117284262 117285433 + 0.301029995663612 NA intron (NM_001163262, intron 1 of 20) intron (NM_001163262, intron 1 of 20) 27828 NM_001163262 74440 Mm.233181 NM_028941 ENSMUSG00000034390 Cmip 4933407C03Rik|5830471E12Rik|AI314065|AI464126 c-Maf inducing protein protein-coding common_peak1_113_874_-0.00202817598315974_9.77212511872811_0.301029995663464 chr2 172439911 172441266 + 0.301029995663464 NA promoter-TSS (NM_025542) promoter-TSS (NM_025542) 10 NM_025542 66404 Mm.25157 NM_025542 ENSMUSG00000027502 Rtfdc1 1700067C04Rik|2410001C21Rik|5730427M17Rik|AA589417 replication termination factor 2 domain containing 1 protein-coding common_peak2_83_601_-0.0029204105884908_9.23215947146546_0.301029995663464 chr7 45714530 45716183 + 0.301029995663464 NA promoter-TSS (NM_020011) promoter-TSS (NM_020011) -149 NM_020011 56632 Mm.24222 NM_020011 ENSMUSG00000057342 Sphk2 C76851 sphingosine kinase 2 protein-coding common_peak2_90_663_-0.00269438862687821_9.37369223703349_0.301029995663414 chr15 66864291 66866318 + 0.301029995663414 NA Intergenic Intergenic -26089 NM_018865 22402 Mm.10222 NM_018865 ENSMUSG00000005124 Wisp1 AW146261|CCN4|Elm1 WNT1 inducible signaling pathway protein 1 protein-coding common_peak2_104_790_-0.00195365379597234_9.62655705757481_0.301029995663365 chr13 74616718 74618522 + 0.301029995663365 NA Intergenic Intergenic -22252 NM_030711 80898 Mm.83526 NM_030711 ENSMUSG00000021583 Erap1 Arts1|ERAAP|PILSA|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding common_peak1_162_1355_-0.00129701921497372_10.4044929535289_0.301029995663266 chr9 124067520 124069799 + 0.301029995663266 NA Intergenic Intergenic -33524 NM_009915 12772 Mm.6272 NM_009915 ENSMUSG00000049103 Ccr2 Cc-ckr-2|Ccr2a|Ccr2b|Ckr2|Ckr2a|Ckr2b|Cmkbr2|mJe-r chemokine (C-C motif) receptor 2 protein-coding common_peak2_280_2642_-0.000369222440509631_11.3677760984213_0.301029995663266 chr7 126797625 126800687 + 0.301029995663266 NA promoter-TSS (NM_001177307) promoter-TSS (NM_001177307) 22 NM_001177307 11674 Mm.275831 NM_007438 ENSMUSG00000030695 Aldoa Aldo-1|Aldo1 aldolase A, fructose-bisphosphate protein-coding common_peak2_485_5174_-0.000254236941531261_12.3372160288033_0.301029995663266 chr11 49975580 49984865 + 0.301029995663266 NA TTS (NM_029004) TTS (NM_029004) -45109 NM_021540 59044 Mm.359004 NM_021540 ENSMUSG00000020376 Rnf130 2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP ring finger protein 130 protein-coding common_peak2_158_1314_-0.000970802583266206_10.360361682888_0.301029995663069 chr1 131182814 131186619 + 0.301029995663069 NA intron (NM_018750, intron 2 of 5) intron (NM_018750, intron 2 of 5) 15469 NM_001311094 54354 Mm.248291 NM_018750 ENSMUSG00000026430 Rassf5 1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl Ras association (RalGDS/AF-6) domain family member 5 protein-coding common_peak1_228_2056_-0.000858183766760945_11.0058969866416_0.301029995662674 chr10 34281247 34283052 + 0.301029995662674 NA promoter-TSS (NM_009433) promoter-TSS (NM_009433) -41 NM_009433 22110 Mm.20445 NM_009433 ENSMUSG00000047514 Tspyl1 Tspyl testis-specific protein, Y-encoded-like 1 protein-coding common_peak1_241_2200_-0.000764274069753768_11.1035612928567_0.301029995659909 chr1 87213560 87215147 + 0.301029995659909 NA 5' UTR (NM_001039169, exon 1 of 7) 5' UTR (NM_001039169, exon 1 of 7) 414 NM_001039169 26987 Mm.227183 NM_023314 ENSMUSG00000026254 Eif4e2 2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3 eukaryotic translation initiation factor 4E member 2 protein-coding common_peak2_2056_21282_0.512885183717724_14.633856495371_Inf chr11 68431197 68455171 + 0 NA intron (NM_177320, intron 1 of 18) intron (NM_177320, intron 1 of 18) 11059 NM_177320 320207 Mm.244960 NM_177320 ENSMUSG00000020901 Pik3r5 AV230647|F730038I15Rik phosphoinositide-3-kinase, regulatory subunit 5, p101 protein-coding common_peak2_2002_8860_1.72996866951417_13.9782381414084_Inf chr11 22971851 22974226 + 0 NA 5' UTR (NM_011663, exon 1 of 1) 5' UTR (NM_011663, exon 1 of 1) 1033 NM_011663 22183 Mm.29542 NM_011663 ENSMUSG00000044068 Zrsr1 D11Ncvs75|Irlgs2|SP2|U2af1-rs1|U2afbp-rs zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 protein-coding common_peak2_1409_12049_0.66523797563929_13.8893645138243_Inf chr6 50386194 50398108 + 0 NA intron (NM_001163645, intron 2 of 21) intron (NM_001163645, intron 2 of 21) -9314 NM_027881 71720 Mm.44153 NM_027881 ENSMUSG00000029822 Osbpl3 1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding common_peak2_1157_8598_0.803598940300352_13.4717526496357_Inf chr2 29626795 29643157 + 0 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 15256 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_1390_10952_0.778936880274566_13.8085068942933_Inf chr12 101002778 101019914 + 0 NA intron (NM_026681, intron 3 of 29) L1MB3|LINE|L1 10422 NR_035421 100316805 NR_035421 ENSMUSG00000080575 Mir1190 Mirn1190|mmu-mir-1190 microRNA 1190 ncRNA common_peak2_2926_26237_0.835128593936433_15.0969344307706_Inf chr5 112269795 112303756 + 0 NA intron (NM_009419, intron 1 of 6) intron (NM_009419, intron 1 of 6) 10068 NM_009419 22022 Mm.250631 NM_009419 ENSMUSG00000029344 Tpst2 AI448750|D5Ucla3|Tango13b|grm|grt protein-tyrosine sulfotransferase 2 protein-coding common_peak2_2320_22229_0.663760424352461_14.7721005400906_Inf chr2 166646105 166677720 + 0 NA intron (NM_177782, intron 1 of 39) L2c|LINE|L2 -10806 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak2_2022_19306_0.623968223390827_14.5488205011387_Inf chr12 104985427 105014678 + 0 NA intron (NM_172500, intron 1 of 16) ID_B1|SINE|B4 -1375 NM_001042699 212073 Mm.212688 NM_172500 ENSMUSG00000054150 Syne3 nesprin-3 spectrin repeat containing, nuclear envelope family member 3 protein-coding common_peak2_1445_11879_0.730351106906157_13.9014227691412_Inf chr4 134115032 134130450 + 0 NA intron (NM_026257, intron 8 of 14) intron (NM_026257, intron 8 of 14) 6012 NM_080559 73723 Mm.22240 NM_080559 ENSMUSG00000028843 Sh3bgrl3 1110004L05Rik|AU022188 SH3 domain binding glutamic acid-rich protein-like 3 protein-coding common_peak2_1260_9282_0.843967875310085_13.6023593407832_Inf chr15 77797076 77808630 + 0 NA intron (NM_022410, intron 3 of 40) intron (NM_022410, intron 3 of 40) 39322 NM_022410 17886 Mm.29677 NM_022410 ENSMUSG00000022443 Myh9 Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6 myosin, heavy polypeptide 9, non-muscle protein-coding common_peak1_1603_14343_0.641947834245878_14.1291336899913_Inf chr14 25514727 25529433 + 0 NA intron (NM_001310666, intron 2 of 23) intron (NM_001310666, intron 2 of 23) -12359 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_1838_16226_0.705944937326414_14.3390811515379_Inf chr19 10978728 10996583 + 0 NA intron (NM_001034898, intron 1 of 6) intron (NM_001034898, intron 1 of 6) 5595 NM_001034898 545279 Mm.329729 NM_001034898 ENSMUSG00000067571 Ms4a15 E530011F12Rik|Gm1286 membrane-spanning 4-domains, subfamily A, member 15 protein-coding common_peak2_2039_20469_0.554389815654073_14.5984183897378_Inf chr11 34761393 34785891 + 0 NA intron (NM_033374, intron 1 of 51) intron (NM_033374, intron 1 of 51) 10263 NM_033374 94176 Mm.380679 NM_033374 ENSMUSG00000020143 Dock2 AI662014|AW122239|CED-5|Hch|MBC dedicator of cyto-kinesis 2 protein-coding common_peak2_1308_10481_0.734827389729578_13.7230400885027_Inf chr15 60109519 60127495 + 0 NA Intergenic Intergenic -101889 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_1505_13029_0.66899484469814_14.0040468858046_Inf chr11 11683585 11707365 + 0 NA intron (NM_001301866, intron 1 of 5) intron (NM_001301866, intron 1 of 5) 5298 NM_001301863 22778 Mm.103545 NM_009578 ENSMUSG00000018654 Ikzf1 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 IKAROS family zinc finger 1 protein-coding common_peak2_2108_19327_0.696073613056763_14.5864415458535_Inf chr10 80014815 80036892 + 0 NA intron (NM_001142701, intron 12 of 22) intron (NM_001142701, intron 12 of 22) 6178 NM_027521 70719 Mm.243954 NM_027521 ENSMUSG00000035697 Hmha1 6330406L22Rik|AW539505|Ha-1 histocompatibility (minor) HA-1 protein-coding common_peak2_583_2434_1.41244990297499_11.9559310084572_Inf chr7 25705105 25712490 + 0 NA Intergenic Intergenic 10256 NM_028771 52132 Mm.278798 NM_028771 ENSMUSG00000002608 Ccdc97 1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e coiled-coil domain containing 97 protein-coding common_peak2_1489_12830_0.672296907574808_13.9834944463849_Inf chr15 78447497 78460737 + 0 NA intron (NM_027902, intron 8 of 17) intron (NM_027902, intron 8 of 17) 14517 NM_027902 71753 Mm.34056 NM_027902 ENSMUSG00000016942 Tmprss6 1300008A22Rik transmembrane serine protease 6 protein-coding common_peak2_2294_24285_0.516208124787164_14.8259413339188_Inf chr10 61261494 61283117 + 0 NA intron (NM_001081127, intron 1 of 21) intron (NM_001081127, intron 1 of 21) 1133 NM_001081127 237360 Mm.333252 NM_001081127 ENSMUSG00000059901 Adamts14 Adamts-14|TS14 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein-coding common_peak2_1365_11366_0.693317176272448_13.8192225133661_Inf chr2 166616950 166633679 + 0 NA intron (NM_177782, intron 5 of 39) intron (NM_177782, intron 5 of 39) -47404 NR_105783 102465188 NR_105783 ENSMUSG00000098675 Mir6364 Gm27327|mmu-mir-6364 microRNA 6364 ncRNA common_peak2_1739_15939_0.63376403103905_14.2772460243974_Inf chr12 102281619 102306214 + 0 NA intron (NM_001161365, intron 1 of 9) intron (NM_001161365, intron 1 of 9) 10275 NM_001161365 217835 Mm.24145 NM_177620 ENSMUSG00000044456 Rin3 6430500K07|C86933 Ras and Rab interactor 3 protein-coding common_peak1_1968_8452_1.76767826397237_13.9290868665644_Inf chr11 22972021 22973057 + 0 NA 5' UTR (NM_011663, exon 1 of 1) 5' UTR (NM_011663, exon 1 of 1) 534 NM_011663 22183 Mm.29542 NM_011663 ENSMUSG00000044068 Zrsr1 D11Ncvs75|Irlgs2|SP2|U2af1-rs1|U2afbp-rs zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 protein-coding common_peak2_2259_23251_0.551782514191546_14.7809584503277_Inf chr11 87742999 87760989 + 0 NA Intergenic Intergenic -4870 NR_029555 387160 NR_029555 ENSMUSG00000105196 Mir142 Mirn142|miR-142|mir-142a|mmu-mir-142|mmu-mir-142a microRNA 142 ncRNA common_peak2_1714_15015_0.6943049982236_14.2213654339427_Inf chr14 25511999 25529934 + 0 NA intron (NM_001310666, intron 2 of 23) intron (NM_001310666, intron 2 of 23) -13473 NR_037236 100526533 NR_037236 ENSMUSG00000093081 Mir3075 mir-3075|mmu-mir-3075 microRNA 3075 ncRNA common_peak2_1136_8768_0.74296926151408_13.4696812452842_Inf chr12 73601662 73613224 + 0 NA intron (NM_001313977, intron 2 of 14) intron (NM_001313977, intron 2 of 14) 22647 NM_008856 18755 Mm.341677 NM_008856 ENSMUSG00000021108 Prkch Pkch protein kinase C, eta protein-coding common_peak2_1486_12556_0.699872090188741_13.9661402549487_Inf chr7 66106249 66133376 + 0 NA intron (NM_001081163, intron 1 of 2) B3|SINE|B2 10297 NM_001081163 269941 Mm.333916 NM_001081163 ENSMUSG00000032640 Chsy1 mKIAA0990 chondroitin sulfate synthase 1 protein-coding common_peak2_2182_17894_0.868237114569746_14.5613874805886_Inf chr8 120780854 120802802 + 0 NA Intergenic MLT1D|LTR|ERVL-MaLR 53189 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_1541_12284_0.79573823924679_13.9824793568729_Inf chr2 29651864 29674369 + 0 NA intron (NM_054050, intron 1 of 23) intron (NM_054050, intron 1 of 23) 43396 NM_001039086 107746 Mm.298274 NM_054050 ENSMUSG00000039844 Rapgef1 4932418O06Rik|C3G|Grf2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding common_peak2_1630_12898_0.824676066101199_14.0673096370887_Inf chr8 120749706 120767797 + 0 NA Intergenic Intergenic 20112 NM_001301811 15900 Mm.334861 NM_008320 ENSMUSG00000041515 Irf8 AI893568|ICSBP|IRF-8|Icsbp1|Myls interferon regulatory factor 8 protein-coding common_peak2_1612_15055_0.581958272898374_14.1690300491777_Inf chr8 124263393 124279868 + 0 NA intron (NM_139272, intron 1 of 15) intron (NM_139272, intron 1 of 15) 40236 NM_139272 108148 Mm.33808 NM_139272 ENSMUSG00000089704 Galnt2 AI480629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein-coding unique_peak1_13_0_6.05995243883157_3.02997621941579_NA chr18 4392452 4392898 + 0 NA intron (NM_026157, intron 6 of 8) Lx7|LINE|L1 17083 NM_026157 67440 Mm.49826 NM_026157 ENSMUSG00000024234 Mtpap 0610027A18Rik|AW551379|Papd1 mitochondrial poly(A) polymerase protein-coding common_peak2_1864_18690_0.526841473526456_14.4534768740767_Inf chr14 54219409 54235100 + 0 NA Intergenic Intergenic 26675 NM_001113358 13135 Mm.319038 NM_010015 ENSMUSG00000022174 Dad1 AI323713 defender against cell death 1 protein-coding common_peak2_2064_21676_0.493290613680667_14.6505227943453_Inf chr8 84974286 84987503 + 0 NA Intergenic Intergenic -2146 NM_008416 16477 Mm.1167 NM_008416 ENSMUSG00000052837 Junb - jun B proto-oncogene protein-coding common_peak2_1307_10661_0.708910907305796_13.7346459204027_Inf chr15 60128220 60151026 + 0 NA Intergenic Intergenic -123005 NM_027668 71088 Mm.425950 NM_027668 ENSMUSG00000071749 4933412E24Rik - RIKEN cDNA 4933412E24 gene protein-coding common_peak2_771_3921_1.21865609462682_12.5467018675056_Inf chr11 3139772 3147199 + 0 NA intron (NM_030207, intron 19 of 32) intron (NM_030207, intron 19 of 32) 19464 NR_003517 236604 Mm.247625 NM_001004146 Pisd-ps1 - phosphatidylserine decarboxylase, pseudogene 1 pseudo common_peak2_15685_70917_2.37146848468925_17.2995984724177_Inf chr7 90441539 90444977 + 0 NA exon (NM_145151, exon 1 of 1) exon (NM_145151, exon 1 of 1) 477 NR_073438 233490 Mm.29496 NM_145151 ENSMUSG00000051451 Crebzf 1110034C16Rik|6330417B10Rik|LAZip|LAZipII|SMILE|Zf CREB/ATF bZIP transcription factor protein-coding unique_peak1_11_0_5.78716315690574_2.89358157845287_NA-2 chr6 127611205 127611505 + 0 NA intron (NM_001033464, intron 4 of 6) intron (NM_001033464, intron 4 of 6) 33380 NM_001033464 381812 Mm.296093 NM_001033464 ENSMUSG00000061414 Cracr2a Efcab4b|Gm1073|Gm462 calcium release activated channel regulator 2A protein-coding unique_peak1_11_0_5.78716315690574_2.89358157845287_NA chr3 96026076 96026472 + 0 NA intron (NM_013841, intron 13 of 14) intron (NM_013841, intron 13 of 14) -30435 NM_023320 67220 Mm.458147 NM_023320 ENSMUSG00000015745 Plekho1 2810052M02Rik|CKIP-1|Ckip1|JZA-20|Jza2 pleckstrin homology domain containing, family O member 1 protein-coding unique_peak1_12_0_5.92880893345458_2.96440446672729_NA chr4 82816419 82816810 + 0 NA intron (NM_026647, intron 7 of 8) B4A|SINE|B4 43047 NM_026647 68268 Mm.32047 NM_026647 ENSMUSG00000028403 Zdhhc21 9130404H11Rik|AL024349|D130004H04Rik|dep zinc finger, DHHC domain containing 21 protein-coding common_peak2_1612_14536_0.632567235010141_14.1437255681218_Inf chr17 29488226 29504627 + 0 NA TTS (NM_008842) TTS (NM_008842) 5381 NM_008842 18712 Mm.405293 NM_008842 ENSMUSG00000024014 Pim1 Pim-1 proviral integration site 1 protein-coding common_peak2_1143_7894_0.905303729393896_13.3993754154445_Inf chr8 126846803 126857920 + 0 NA Intergenic Intergenic 93560 NM_024214 67952 Mm.6932 NM_024214 ENSMUSG00000093904 Tomm20 1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016 translocase of outer mitochondrial membrane 20 homolog (yeast) protein-coding